LOCUS       XP_041332088             851 aa            linear   VRT 06-MAY-2021
DEFINITION  prominin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332088
VERSION     XP_041332088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..851
                     /product="prominin-1 isoform X2"
                     /calculated_mol_wt=94418
     Region          27..813
                     /region_name="Prominin"
                     /note="pfam05478"
                     /db_xref="CDD:461660"
     CDS             1..851
                     /gene="PROM1"
                     /coded_by="XM_041476154.1:195..2750"
                     /db_xref="GeneID:121358114"
ORIGIN      
        1 mavelcllll lfcgstisev qpiykpppgt ldfgfvpakt ydtgayhepg aigilfkivh
       61 aflylvqpnt fpqdlirkla qqqfgntqgd yqkaiyyeig fivsaalgll filllplvgl
      121 cfcmcrccdn cggemhqrqk knadcqrscf atflfvasli isvgvlcaya anqhltnqvr
      181 gakklvnsnf kdlkiflndt paqidylvnq ynttkdkals dlnnvgpvlg trvqeqlgke
      241 vrpaldaalt magairetke alenvsvsve vlqegterlh anltdvkmhl sntlndsacs
      301 aaqaastcni irnslaqlni nanfsglpgv ssqlakindv lkidlsslvq kgyaafndtp
      361 dlvvnqtrni lsdiksvles igsnittftr alpvqkilad lmvhltqsea yvqdyfplve
      421 qydfyrwlgc lilccmlvli lvfyylgllc gtcgydkhas pttrgcisnt ggnflmagvg
      481 fsflfswvlm ivvvltfvtg gnveklvcep fedknlfkvl dtpyllnkhw knylagvifk
      541 npnvnltfek vysdckenkg iytslhlehl fninellnis mytedvalki ehiqinlski
      601 illdeigken llnfsssgid gidfsaylte inksvtkvdl lsfandlear adqlpkgale
      661 nalkghanni rmihnqqvvp leqamstlnq sirllkrtss elmvkvknvi savnaaqdli
      721 nnnasqvivq etkkymdtii gyfeqytewv kesismevaa ckpianvidt avdiflcsyi
      781 adsvntfwfg lggssmflip aiifavklsk yyrrmdtedv yddtgngnng yhkehlygih
      841 npvftssveq w
//
LOCUS       XP_041332181             837 aa            linear   VRT 06-MAY-2021
DEFINITION  prominin-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041332181
VERSION     XP_041332181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476247.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..837
                     /product="prominin-1 isoform X3"
                     /calculated_mol_wt=92874
     Region          27..822
                     /region_name="Prominin"
                     /note="pfam05478"
                     /db_xref="CDD:461660"
     CDS             1..837
                     /gene="PROM1"
                     /coded_by="XM_041476247.1:195..2708"
                     /db_xref="GeneID:121358114"
ORIGIN      
        1 mavelcllll lfcgstisev qpiykpppgt ldfgfvpakt ydtgayhepg aigilfkivh
       61 aflylvqpnt fpqdlirkla qqqfgntqgd yqkpenvvlt lqaiyyeigf ivsaalgllf
      121 illlplvglc fcmcrccdnc ggemhqrqkk nadcqrscfa tflfvaslii svgvlcayaa
      181 nqhltnqvrg akklvnsnfk dlkiflndtp aqidylvnqy nttkdkalsd lnnvgpvlgt
      241 rvqeqlgkev rpaldaaltm agairetkea lenvsvsvev lqegterlha nltdvkmhls
      301 ntlndsacsa aqaastcnii rnslaqlnin anfsglpgvs sqlakindvl kidlsslvqk
      361 gyaafndtpd lvvnqtrnil sdiksvlesi gsnittftra lpvqkiladl mvhltqseay
      421 vqdyfplveq ydfyrwlgcl ilccmlvlil vfyylgllcg tcgydkhasp ttrgcisntg
      481 gnflmagvgf sflfswvlmi vvvltfvtgg nveklvcepf edknlfkvld tpyllnkhwk
      541 nylagvifkn pnvnltfekv ysdckenkgi ytslhlehlf ninellnism ytedvalkie
      601 hiqinlskii lldeigkenl lnfsssgidg idfsayltei nksvtkvdll sfandleara
      661 dqlpkgalen alkghannir mihnqqvvpl eqamstlnqs irllkrtsse lmvkvknvis
      721 avnaaqdlin nnasqvivqe tkkymdtiig yfeqytewvk esismevaac kpianvidta
      781 vdiflcsyia dsvntfwfgl ggssmflipa iifavklsky yrrmdtedvy ddsveqw
//
LOCUS       XP_041332272             828 aa            linear   VRT 06-MAY-2021
DEFINITION  prominin-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041332272
VERSION     XP_041332272.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476338.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..828
                     /product="prominin-1 isoform X4"
                     /calculated_mol_wt=91880
     Region          27..813
                     /region_name="Prominin"
                     /note="pfam05478"
                     /db_xref="CDD:461660"
     CDS             1..828
                     /gene="PROM1"
                     /coded_by="XM_041476338.1:195..2681"
                     /db_xref="GeneID:121358114"
ORIGIN      
        1 mavelcllll lfcgstisev qpiykpppgt ldfgfvpakt ydtgayhepg aigilfkivh
       61 aflylvqpnt fpqdlirkla qqqfgntqgd yqkaiyyeig fivsaalgll filllplvgl
      121 cfcmcrccdn cggemhqrqk knadcqrscf atflfvasli isvgvlcaya anqhltnqvr
      181 gakklvnsnf kdlkiflndt paqidylvnq ynttkdkals dlnnvgpvlg trvqeqlgke
      241 vrpaldaalt magairetke alenvsvsve vlqegterlh anltdvkmhl sntlndsacs
      301 aaqaastcni irnslaqlni nanfsglpgv ssqlakindv lkidlsslvq kgyaafndtp
      361 dlvvnqtrni lsdiksvles igsnittftr alpvqkilad lmvhltqsea yvqdyfplve
      421 qydfyrwlgc lilccmlvli lvfyylgllc gtcgydkhas pttrgcisnt ggnflmagvg
      481 fsflfswvlm ivvvltfvtg gnveklvcep fedknlfkvl dtpyllnkhw knylagvifk
      541 npnvnltfek vysdckenkg iytslhlehl fninellnis mytedvalki ehiqinlski
      601 illdeigken llnfsssgid gidfsaylte inksvtkvdl lsfandlear adqlpkgale
      661 nalkghanni rmihnqqvvp leqamstlnq sirllkrtss elmvkvknvi savnaaqdli
      721 nnnasqvivq etkkymdtii gyfeqytewv kesismevaa ckpianvidt avdiflcsyi
      781 adsvntfwfg lggssmflip aiifavklsk yyrrmdtedv yddsveqw
//
LOCUS       XP_041332387             456 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit alpha-2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332387
VERSION     XP_041332387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476453.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="gamma-aminobutyric acid receptor subunit alpha-2
                     isoform X1"
                     /calculated_mol_wt=51493
     Region          25..442
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          47..249
                     /region_name="LGIC_ECD_GABAAR_A2"
                     /note="extracellular domain of gamma-aminobutyric acid
                     receptor subunit alpha-2 (GABAAR-A2 or GABRA2); cd19035"
                     /db_xref="CDD:349836"
     Site            order(64,92)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349836"
     Site            order(76,78..79,84..85,92,94..95,112,114..115,124..129,
                     132,134,136..137,143..145,147,157..159,187,249)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349836"
     Region          166..180
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349836"
     CDS             1..456
                     /gene="GABRA2"
                     /coded_by="XM_041476453.1:15..1385"
                     /db_xref="GeneID:121358314"
ORIGIN      
        1 mkkklalsem qlvllvllvw lptrsvlads ledeaknnit iftrildrll dgydnrlrpg
       61 lgdsitevft niyvtsfgpv sdtdmeytid vffrqrwkde rlkfkgpmni lrlnnlmask
      121 iwtpdtffhn gkksvahnmt mpnkllriqd dgtllytmrl tvqaecpmhl edfpmdahsc
      181 plkfgsyayt tsevtyiwty nasdsvqvap dgsrlnqydl lgqtigketv ksstgeytvm
      241 tahfhlkrki gyfviqtylp cimtvilsqv sfwlnresvp artvfgvttv ltmttlsisa
      301 rnslpkvaya tamdwfiavc yafvfsalie fatvnyftkr gwawdgksvv ndkpkkekas
      361 vikknnayav avanyapnit kdsvlptisk sattaepnka kpeakpqeak ktfnsvskid
      421 rmsrivfpvl fgtfnlvywa tylnrepvll gfapst
//
LOCUS       XP_041332468             455 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit alpha-2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332468
VERSION     XP_041332468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476534.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="gamma-aminobutyric acid receptor subunit alpha-2
                     isoform X2"
                     /calculated_mol_wt=51396
     Region          25..441
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          47..249
                     /region_name="LGIC_ECD_GABAAR_A2"
                     /note="extracellular domain of gamma-aminobutyric acid
                     receptor subunit alpha-2 (GABAAR-A2 or GABRA2); cd19035"
                     /db_xref="CDD:349836"
     Site            order(64,92)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349836"
     Site            order(76,78..79,84..85,92,94..95,112,114..115,124..129,
                     132,134,136..137,143..145,147,157..159,187,249)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349836"
     Region          166..180
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349836"
     CDS             1..455
                     /gene="GABRA2"
                     /coded_by="XM_041476534.1:19..1386"
                     /db_xref="GeneID:121358314"
ORIGIN      
        1 mkkklalsem qlvllvllvw lptrsvlads ledeaknnit iftrildrll dgydnrlrpg
       61 lgdsitevft niyvtsfgpv sdtdmeytid vffrqrwkde rlkfkgpmni lrlnnlmask
      121 iwtpdtffhn gkksvahnmt mpnkllriqd dgtllytmrl tvqaecpmhl edfpmdahsc
      181 plkfgsyayt tsevtyiwty nasdsvqvap dgsrlnqydl lgqtigketv ksstgeytvm
      241 tahfhlkrki gyfviqtylp cimtvilsqv sfwlnresvp artvfgvttv ltmttlsisa
      301 rnslpkvaya tamdwfiavc yafvfsalie fatvnyftkr gwawdgksvv ndkkkekasv
      361 ikknnayava vanyapnitk dsvlptisks attaepnkak peakpqeakk tfnsvskidr
      421 msrivfpvlf gtfnlvywat ylnrepvllg fapst
//
LOCUS       XP_041332595             743 aa            linear   VRT 06-MAY-2021
DEFINITION  UV-stimulated scaffold protein A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332595
VERSION     XP_041332595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..743
                     /product="UV-stimulated scaffold protein A isoform X1"
                     /calculated_mol_wt=85081
     Region          527..633
                     /region_name="DUF2043"
                     /note="Uncharacterized conserved protein (DUF2043);
                     pfam09740"
                     /db_xref="CDD:462871"
     CDS             1..743
                     /gene="UVSSA"
                     /coded_by="XM_041476661.1:127..2358"
                     /db_xref="GeneID:121358433"
ORIGIN      
        1 meqrlaelve elttsgepql epgrmkelkk icksseehvs hayhllltrl qeehaemrfs
       61 afqlvqelfa rshhfrtlli snfqgflelt vgidheqplp ppkevaqklr raaikavqdw
      121 hekygeaykq lslgyhflkq nkkvdfqdvh artvaerrre eekqkrleni ykekvkrtek
      181 emeemsqeia dtltemencf qllmpdpfnf gvdeidpels kqtsadearp asplssqgev
      241 npsslgcmdd eqpccskdil pvsrcvttdg skeaeekpeq eelgggtcsd irysgpaldd
      301 dddyqsfvrn hglishkytl dleistdikv qenedntaii nsvmdahkll rnkfwpsvqs
      361 wiqlltragv nddrlrraie lknemetamk kykevdisfk arkrkvmkas ddddededed
      421 efvevpekeg yephipdhlr keyglepqsp pkapvakasr gaaplssrap lkgnedeldp
      481 tcaaatlkll rdklpklpsp rasesatset adledpeskr rkleerakap lmpfgldlhy
      541 wgedqpsagk ilkftsehrf wapseveeev enkeitemlk tryitfagkf epvkhkcrap
      601 mpdgslcerq drikcpfhgk iiprddsgip vnaedraree kmkfekqaaq pewrdpefmr
      661 eveaatgldl gssksngkgq kkkgkkqkyp nltdlkqqan tsrsrlekkv fnkgamkrvm
      721 kamnrvdqrk hekfanqfny aln
//
LOCUS       XP_041332672             687 aa            linear   VRT 06-MAY-2021
DEFINITION  UV-stimulated scaffold protein A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332672
VERSION     XP_041332672.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476738.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="UV-stimulated scaffold protein A isoform X2"
                     /calculated_mol_wt=78586
     Region          471..577
                     /region_name="DUF2043"
                     /note="Uncharacterized conserved protein (DUF2043);
                     pfam09740"
                     /db_xref="CDD:462871"
     CDS             1..687
                     /gene="UVSSA"
                     /coded_by="XM_041476738.1:210..2273"
                     /db_xref="GeneID:121358433"
ORIGIN      
        1 mrfsafqlvq elfarshhfr tllisnfqgf leltvgidhe qplpppkeva qklrraaika
       61 vqdwhekyge aykqlslgyh flkqnkkvdf qdvhartvae rrreeekqkr leniykekvk
      121 rtekemeems qeiadtltem encfqllmpd pfnfgvdeid pelskqtsad earpasplss
      181 qgevnpsslg cmddeqpccs kdilpvsrcv ttdgskeaee kpeqeelggg tcsdirysgp
      241 aldddddyqs fvrnhglish kytldleist dikvqenedn taiinsvmda hkllrnkfwp
      301 svqswiqllt ragvnddrlr raielkneme tamkkykevd isfkarkrkv mkasdddded
      361 ededefvevp ekegyephip dhlrkeygle pqsppkapva kasrgaapls sraplkgned
      421 eldptcaaat lkllrdklpk lpsprasesa tsetadledp eskrrkleer akaplmpfgl
      481 dlhywgedqp sagkilkfts ehrfwapsev eeevenkeit emlktryitf agkfepvkhk
      541 crapmpdgsl cerqdrikcp fhgkiiprdd sgipvnaedr areekmkfek qaaqpewrdp
      601 efmreveaat gldlgssksn gkgqkkkgkk qkypnltdlk qqantsrsrl ekkvfnkgam
      661 krvmkamnrv dqrkhekfan qfnyaln
//
LOCUS       XP_041332795             554 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332795
VERSION     XP_041332795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="gamma-aminobutyric acid receptor subunit alpha-4
                     isoform X1"
                     /calculated_mol_wt=61263
     Region          50..541
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          56..254
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(81,83,89..90,97,115,117,129..130,132,134..135,
                     148..150,152,162,164,166,170,192,254)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349787"
     CDS             1..554
                     /gene="GABRA4"
                     /coded_by="XM_041476861.1:32..1696"
                     /db_xref="GeneID:121358555"
ORIGIN      
        1 mvsakepaia mssglsiall hclclatclt gppgqikkee klwpenftsi lnslldgydn
       61 rlrpgfggpv tevktdiyvt sfgpvsdvem eytmdvffrq twvdkrlkyd gpieilrlnn
      121 lmvskvwtpd tffrngkksv ahnmtapnkl frimrngtil ytmrltisae cpmrlvdfpm
      181 dghacplkfg syaypksemi ytwtkgpeks vevpeesssl vqydllghtv ssetiksitg
      241 eyivmtvyfh lrrkmgyfmi qtyipcimtv ilsqvsfwin kesvpartvf gittvltmtt
      301 lsisarhslp kvsyatamdw fiavcfafvf saliefaavn yftniqmera krktvkslle
      361 fpvapvqrkr steetlqntd ansnvrkrtn atvqseadgg sridtrhssv qppsvaqgss
      421 ditphslsas spnpftrina setlssarat ppappstpil tgfvsqhata gspsiqhllg
      481 srleqiqttt pntlgapakp savtpppppa shsgtskidk yarilfpvtf gafnmvywvv
      541 ylskdtmeks eslm
//
LOCUS       XP_041332885             536 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit alpha-4 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332885
VERSION     XP_041332885.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476951.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="gamma-aminobutyric acid receptor subunit alpha-4
                     isoform X2"
                     /calculated_mol_wt=59786
     Region          32..523
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          38..236
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(63,65,71..72,79,97,99,111..112,114,116..117,
                     130..132,134,144,146,148,152,174,236)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349787"
     CDS             1..536
                     /gene="GABRA4"
                     /coded_by="XM_041476951.1:1..1611"
                     /db_xref="GeneID:121358555"
ORIGIN      
        1 mqrwflprsh ltgppgqikk eeklwpenft silnslldgy dnrlrpgfgg pvtevktdiy
       61 vtsfgpvsdv emeytmdvff rqtwvdkrlk ydgpieilrl nnlmvskvwt pdtffrngkk
      121 svahnmtapn klfrimrngt ilytmrltis aecpmrlvdf pmdghacplk fgsyaypkse
      181 miytwtkgpe ksvevpeess slvqydllgh tvssetiksi tgeyivmtvy fhlrrkmgyf
      241 miqtyipcim tvilsqvsfw inkesvpart vfgittvltm ttlsisarhs lpkvsyatam
      301 dwfiavcfaf vfsaliefaa vnyftniqme rakrktvksl lefpvapvqr krsteetlqn
      361 tdansnvrkr tnatvqsead ggsridtrhs svqppsvaqg ssditphsls asspnpftri
      421 nasetlssar atppappstp iltgfvsqha tagspsiqhl lgsrleqiqt ttpntlgapa
      481 kpsavtpppp pashsgtski dkyarilfpv tfgafnmvyw vvylskdtme kseslm
//
LOCUS       XP_041333000             222 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-28 [Pyrgilauda ruficollis].
ACCESSION   XP_041333000
VERSION     XP_041333000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="ras-related protein Rab-28"
                     /calculated_mol_wt=24694
     Region          14..222
                     /region_name="Rab28"
                     /note="Rab GTPase family 28 (Rab28); cd04109"
                     /db_xref="CDD:206694"
     Site            14..15
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206694"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206694"
     Site            order(22..28,38,44..45,72,130..131,133,160..162)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206694"
     Site            28..44
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206694"
     Site            order(38,43..51)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206694"
     Site            order(43,47..54,62,64)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206694"
     Site            45
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206694"
     Site            order(46,48..50,66,68,75..76,79,83,85..88,178)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206694"
     Site            order(46..47,49,68..69,76,78,80..82)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206694"
     Site            46..50
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206694"
     Site            64..68
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206694"
     Site            69..72
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206694"
     Site            order(72,74..84)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206694"
     Site            75..80
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206694"
     Site            83..87
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206694"
     Site            92..97
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206694"
     Site            123..127
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206694"
     Site            130..133
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206694"
     Site            160..162
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206694"
     Site            176..181
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206694"
     Site            219..222
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206694"
     CDS             1..222
                     /gene="RAB28"
                     /coded_by="XM_041477066.1:1401..2069"
                     /db_xref="GeneID:121358641"
ORIGIN      
        1 msdseeeesp drqlklvvlg dgttgktsla trfaqetfgk qykqtlgldf flkrillpgn
       61 lnvtlqvwdv ggqtiggkml dkyiygaqgi llvyditngq sfenledwyn vvkkvnegse
      121 tqplvalvgn kidlehirtv kadkhqrfcq ennfsshfvs aktgdsvflc fqriaadilg
      181 iklnkaeleq sqrvvkadiv nysqepvtrt inpsrssmca vq
//
LOCUS       XP_041333115            1042 aa            linear   VRT 06-MAY-2021
DEFINITION  multifunctional protein ADE2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333115
VERSION     XP_041333115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1042
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1042
                     /product="multifunctional protein ADE2 isoform X1"
                     /calculated_mol_wt=116814
     Region          6..91
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          182..267
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          411..497
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     Region          624..875
                     /region_name="SAICAR_synt_Ade5"
                     /note="Ade5_like
                     5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide
                     (SAICAR) synthase; cd01416"
                     /db_xref="CDD:133471"
     Site            order(630..631,633..634,636,638..639,648,650,693,706,708,
                     710,748,810,823..824)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:133471"
     Site            order(631,633..636,638,648,660,694,705..708,710,714,716,
                     718,722..724,746,748,754,806..808,810,824,829..832)
                     /site_type="active"
                     /db_xref="CDD:133471"
     Site            order(660,714,716,718,722..724,746,754,806..808,829..832)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133471"
     Region          885..1038
                     /region_name="purE"
                     /note="phosphoribosylaminoimidazole carboxylase, PurE
                     protein; TIGR01162"
                     /db_xref="CDD:273474"
     CDS             1..1042
                     /gene="PAICS"
                     /coded_by="XM_041477181.1:1..3129"
                     /db_xref="GeneID:121358717"
ORIGIN      
        1 mesgagkhwt eeevkallsv wseknirkql hgtlrnkgif iyiakrlqel gvcrdwkqcr
       61 akyknlkyey rtvkyahnsg dvtktmkffh dldailryep vtqlaaeeng rcsatetqln
      121 tspttdstqg eipvsledde daagdpllfi sharpvqlgn pasaveaskp pafiptvane
      181 ggkhwtvnev raliriwsdk niqqqlegtv rnkrifeqva arlqkfgidr dwkqcrtkyk
      241 nlkheyksvk saqdsgsttk smkffnelda ilghctmeqa sksdndeser ppewteakse
      301 kdsvempgdt geedsvsnts edlqvadikk vsdseilede gdlanstpaa leatqikket
      361 ididddsist tsedrsctpv akqmvgtdnh ipleeaqnhf kvitvndtga gkhwsdnevr
      421 aliniwsdek iqqmlegatr nkeifeeiar rlmkrgidrd wkqcrtkykn lkyeyralqk
      481 enehlgnprr kmrfydevdc ilrrqplgts gwgcesssll svsvgdatan tgslstkrkt
      541 wndevspvpl kksasentil hfqklltesv htvtegkkll ferlckqeem qdlnrtqlyt
      601 dpsaiqqvpa papaaamapa asdlklgkkv negktkevye lpdipgcvlm qskdqitagn
      661 aarkdrmegk aaisntttsc vfqllqeagi ktafvrkqsd tafiaahcem ipiewvcrri
      721 atgsflkrnp gvkegyrfyp pkiemfykdd anndpqwsee qiieakfcfa gltigqtevd
      781 imsrstqaif eilekawqpq nctlvdlkie fgvnvltkei vladvidnds wrlwpagdrs
      841 qqkdkqsyrd lkevtpealq mvkrnfewvs ervelllktk sqgrvvvlmg sssdlshcek
      901 ikkacatfgi pcelrvtsah kgpdetlrik aeyegdgipt vfvavagrsn glgpvmsgnt
      961 aypvvncppl sadwgtqdvw sslrlpsgls cpttlspega aqfaaqifgl nnhlvwaklr
     1021 snmlntwisl kqadkklrec sl
//
LOCUS       XP_041333191             440 aa            linear   VRT 06-MAY-2021
DEFINITION  multifunctional protein ADE2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333191
VERSION     XP_041333191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="multifunctional protein ADE2 isoform X2"
                     /calculated_mol_wt=48480
     Region          22..273
                     /region_name="SAICAR_synt_Ade5"
                     /note="Ade5_like
                     5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide
                     (SAICAR) synthase; cd01416"
                     /db_xref="CDD:133471"
     Site            order(28..29,31..32,34,36..37,46,48,91,104,106,108,146,
                     208,221..222)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:133471"
     Site            order(29,31..34,36,46,58,92,103..106,108,112,114,116,
                     120..122,144,146,152,204..206,208,222,227..230)
                     /site_type="active"
                     /db_xref="CDD:133471"
     Site            order(58,112,114,116,120..122,144,152,204..206,227..230)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:133471"
     Region          283..436
                     /region_name="purE"
                     /note="phosphoribosylaminoimidazole carboxylase, PurE
                     protein; TIGR01162"
                     /db_xref="CDD:273474"
     CDS             1..440
                     /gene="PAICS"
                     /coded_by="XM_041477257.1:42..1364"
                     /db_xref="GeneID:121358717"
ORIGIN      
        1 mfargvpapa paaamapaas dlklgkkvne gktkevyelp dipgcvlmqs kdqitagnaa
       61 rkdrmegkaa isntttscvf qllqeagikt afvrkqsdta fiaahcemip iewvcrriat
      121 gsflkrnpgv kegyrfyppk iemfykddan ndpqwseeqi ieakfcfagl tigqtevdim
      181 srstqaifei lekawqpqnc tlvdlkiefg vnvltkeivl advidndswr lwpagdrsqq
      241 kdkqsyrdlk evtpealqmv krnfewvser velllktksq grvvvlmgss sdlshcekik
      301 kacatfgipc elrvtsahkg pdetlrikae yegdgiptvf vavagrsngl gpvmsgntay
      361 pvvncpplsa dwgtqdvwss lrlpsglscp ttlspegaaq faaqifglnn hlvwaklrsn
      421 mlntwislkq adkklrecsl
//
LOCUS       XP_041333316             508 aa            linear   VRT 06-MAY-2021
DEFINITION  amidophosphoribosyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041333316
VERSION     XP_041333316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="amidophosphoribosyltransferase"
                     /calculated_mol_wt=55857
     Region          7..507
                     /region_name="PurF"
                     /note="Glutamine phosphoribosylpyrophosphate
                     amidotransferase [Nucleotide transport and metabolism];
                     COG0034"
                     /db_xref="CDD:439804"
     CDS             1..508
                     /gene="PPAT"
                     /coded_by="XM_041477382.1:241..1767"
                     /db_xref="GeneID:121358846"
ORIGIN      
        1 meleelgire ecgvfgcias gawpteldvp hvitlglvgl qhrgqesagi vtsdgessqa
       61 fkvhkgmgli nhvfsadslk klypsnlgig htrystsgis elqncqpfvv etlhgkiava
      121 hngeltnaar lrrklmrhgv glstssdsel itqllaftpp lenddtadwv ariknlmket
      181 ptsysllimh kdiiyavrdp ygnrplcigr lipvgdmngk gkdntetegw vvssescsfl
      241 sigaeyyrev lpgeivkisr hdvqtldvvr rsegdpsafc ifeyvyfarp dsifegqmvy
      301 svrkrcgqql aieapveadl vstvpesatp aalgyaqkcg lpyvevlckn ryvgrtfiqp
      361 nmrlrqlgva kkfgvlsdnf kgkrvviidd sivrgntisp iikllresga kevhirvasp
      421 pikfpcymgi niptkeelia nrpefrdlan yigadsvvyl sveglvssvq esikarqdnn
      481 pkthksfigk lghctacltg dypvelew
//
LOCUS       XP_041333441            1428 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333441
VERSION     XP_041333441.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477507.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1428
                     /product="histone-lysine N-methyltransferase NSD2"
                     /calculated_mol_wt=161565
     Region          221..348
                     /region_name="PWWP_NSD2_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 2 (NSD2) and similar proteins;
                     cd20162"
                     /db_xref="CDD:438990"
     Site            order(234,237,267)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438990"
     Site            235..238
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438990"
     Site            order(304..306,309..310)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438990"
     Region          456..517
                     /region_name="HMG-box_NSD2"
                     /note="high mobility group (HMG)-box found in nuclear SET
                     domain-containing protein 2 (NSD2) and similar proteins;
                     cd21991"
                     /db_xref="CDD:438807"
     Site            order(458..459,461..465,468..469,476,488..489,492,
                     495..496,503,507,510,514,517)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438807"
     Region          734..776
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(734,744..747,752,770)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277118"
     Region          781..827
                     /region_name="PHD2_NSD2"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 2 (NSD2); cd15651"
                     /db_xref="CDD:277121"
     Site            order(781,791..795,801,822)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277121"
     Region          828..881
                     /region_name="PHD3_NSD2"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 2 (NSD2); cd15654"
                     /db_xref="CDD:277124"
     Site            order(828,846..850,854,876)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277124"
     Region          898..938
                     /region_name="PHD4_NSD2"
                     /note="PHD finger 4 found in nuclear SET domain-containing
                     protein 2 (NSD2); cd15657"
                     /db_xref="CDD:277127"
     Site            order(898,907..911,915,932)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277127"
     Region          944..1039
                     /region_name="PWWP_NSD2_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 2 (NSD2) and similar proteins;
                     cd20165"
                     /db_xref="CDD:438993"
     Site            order(956,959,987)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438993"
     Site            957..960
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438993"
     Region          1087..1125
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1127..1268
                     /region_name="SET_NSD2"
                     /note="SET domain (including post-SET domain) found in
                     nuclear SET domain-containing protein 2 (NSD2) and similar
                     proteins; cd19211"
                     /db_xref="CDD:380988"
     Site            order(1138..1140,1157,1167,1171,1180..1186,1203..1207,
                     1214..1216,1231,1242..1252,1254..1258,1267)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380988"
     Site            order(1138..1140,1180..1183,1203..1207,1244,1251,
                     1255..1258,1267)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380988"
     Site            order(1157,1167,1171,1182..1186,1214..1216,1231,
                     1242..1246)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380988"
     Site            order(1209,1256,1258,1263)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380988"
     Region          1306..1348
                     /region_name="PHD5_NSD2"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 2 (NSD2); cd15660"
                     /db_xref="CDD:277130"
     Site            order(1306,1315..1319,1325,1343)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277130"
     Region          1347..1391
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1428
                     /gene="NSD2"
                     /coded_by="XM_041477507.1:156..4442"
                     /db_xref="GeneID:121358898"
ORIGIN      
        1 mdfsikrssq lltqkincik mkqvpeilgn tngkpqncev nrecsvylgk aqlsatlqeg
       61 vmqkynghet lpfipadklk dltsrvfnge sgaqdaklrf epqeikgvgt ppnttpikng
      121 speiklkitk tymngkplfe ssicgdngad vsqseeneqk pankerrsrk rsikydslle
      181 qglvetalvs ktssttekkg pskrdqtqst ikeekvhllk ynigdlvwsk vsgfpwwpcm
      241 vsadpvlhay tklkgqkksf rqyhvqffgd aperawifek slvpfkekdq feqlcqesar
      301 qaltksekik mlkpvsgklr pqwemgvkqa seavgmpvee rkakytfiyv rdrphlnprv
      361 akevgiavep leemdessys heettpnlks mkesgipskr rrrtsklsaa ddmqessqle
      421 dknttpqkss eqaeskrgig splnrkktpa stprsrkgda vsqflvfcqk yrdevvaehp
      481 dasseeieel lesqwnmlse kqkaryntkf aivtspksee dsgsslknig eakrkvfqds
      541 pkrrsrsrsn lhgnkrnqkk rtkeptedfe vqeaprkrlr mdkqnnrknh rilrigrglw
      601 kssspiplpr qghleqvtqe cvqretsndk taktnsskvt etsssqknqs atknlsdack
      661 plkkrnrasa aesstlafsk ssspsaslte neisdgqgde rsespyesad etqtevsiss
      721 kksergvgtk keyvcqlcek tgdlllcegl cyrafhvscl glsgrpagkf icsectsgvh
      781 tcfvckerka dvkrcvvshc gkfyheacvk kfhltvfenr gfrcplhscl schvsnpshp
      841 riskgkmmrc vrcpvayhag dvciaagcav iasnsivctn hftamkgksh hahvnvswcf
      901 vcskggsllc cescpaafhp dclniempdg swycndcrag kklhfqdiiw vklgnyrwwp
      961 aevchpknvp pniqkmkhei gefpvfffgs kdyywthqar vfpymegdrg sryqgikgig
     1021 kvfknalqea etrfreiklq reaketqese rkpppykhik vnkpcgkvqi ytadiseipk
     1081 cnckptdenp cgfdseclnr mlmyechpqv cpagercqnq cftkrqypet kiiktdgkgw
     1141 glvakrdikk gefvneyvge lideeecmar ikyahendit hfymltidkd riidagpkgn
     1201 ysrfmnhscq pncetlkwtv ngdtrvglfa vcdipagtel tfnynldclg nektvckcga
     1261 pncsgflgdr pknsstnase ekgkktkkrt rrrrtknegk keseddcfrc gdggqlvlcd
     1321 rksctkayhl sclglvkrpf gkwecpwhhc dvcgkpsvsf chfcpnsfck ehqdrtvlns
     1381 tlngqlccse hvlgvdsvet qktekprkkl nkfkprrkrn rwmraeck
//
LOCUS       XP_041333561             289 aa            linear   VRT 06-MAY-2021
DEFINITION  RELT-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333561
VERSION     XP_041333561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="RELT-like protein 1"
                     /calculated_mol_wt=31338
     Region          63..>95
                     /region_name="RELT"
                     /note="Tumour necrosis factor receptor superfamily member
                     19; pfam12606"
                     /db_xref="CDD:403713"
     CDS             1..289
                     /gene="RELL1"
                     /coded_by="XM_041477627.1:83..952"
                     /db_xref="GeneID:121358979"
ORIGIN      
        1 mapaatggip pttpslglma dglgnssald gevpwvlssh glqtttlttk tdgndgkaeh
       61 leyiafalvp vffimgllgi lichilkkkg yrctteaeel eeekidekie mnetihensd
      121 tvgqivnyim kneanadvlk amvadssvfe pesplsptsp espmspgtpl spgvvpfrhn
      181 ckahhfhtvg gvvekdvctr cshkrwhlik paqkskenrr srigevtvls vgrfrvtkvd
      241 hksnskerks lmsvtgvesv ngempakqdv seapatpakq emqerrssd
//
LOCUS       XP_041333648             289 aa            linear   VRT 06-MAY-2021
DEFINITION  RELT-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333648
VERSION     XP_041333648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="RELT-like protein 1"
                     /calculated_mol_wt=31338
     Region          63..>95
                     /region_name="RELT"
                     /note="Tumour necrosis factor receptor superfamily member
                     19; pfam12606"
                     /db_xref="CDD:403713"
     CDS             1..289
                     /gene="RELL1"
                     /coded_by="XM_041477714.1:83..952"
                     /db_xref="GeneID:121358979"
ORIGIN      
        1 mapaatggip pttpslglma dglgnssald gevpwvlssh glqtttlttk tdgndgkaeh
       61 leyiafalvp vffimgllgi lichilkkkg yrctteaeel eeekidekie mnetihensd
      121 tvgqivnyim kneanadvlk amvadssvfe pesplsptsp espmspgtpl spgvvpfrhn
      181 ckahhfhtvg gvvekdvctr cshkrwhlik paqkskenrr srigevtvls vgrfrvtkvd
      241 hksnskerks lmsvtgvesv ngempakqdv seapatpakq emqerrssd
//
LOCUS       XP_041333766            1345 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 19 [Pyrgilauda ruficollis].
ACCESSION   XP_041333766
VERSION     XP_041333766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1345
                     /product="WD repeat-containing protein 19"
                     /calculated_mol_wt=152445
     Region          <26..345
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          56..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          100..136
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          143..217
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          234..270
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          278..303
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          322..346
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          508..564
                     /region_name="WD40_3"
                     /note="WD domain, G-beta repeat; pfam15911"
                     /db_xref="CDD:464937"
     Region          779..807
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          788..1025
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          812..846
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1345
                     /gene="WDR19"
                     /coded_by="XM_041477832.1:39..4076"
                     /db_xref="GeneID:121359089"
ORIGIN      
        1 mkqvfslyek swsgspvqft wqktlgnfla viggdrsvki fdrhgqkrne inlpgncvam
       61 dwdkdgdtla iitdksstif lwdaitnkts qvdsgmrdam sfllwsrvga llavgttkgn
      121 lliynhqtsr kisvlgkhtk ritcgcwsie nllalggedr mitisnqegd tirqtsissd
      181 psnmqfsvmk tdervstres tvsvvvgkkt lflfnlndpd npidlkfqqp ygsivsykwy
      241 gdgyimigfs qgcfvvisth ireigqevfq ahnhkdnlss iaisqslnka ascgdnciki
      301 hdltdmremy aiinlddenk gvdqmawtdd gqllavstrr gslhvfltkl pilgdacstr
      361 iayltsllev tianhvesel pvtvsvevep nfvaigvyhl avgmnnrawf yalgennvkk
      421 lkdveylgtv asmhlnsdya aalfegkvql hvieseglsa qeeretrlfp adddkyrilc
      481 haltsdfliy gtdtgviryf fiedwqyvne yrhpvsvrkv fpdpngtrmv fiddksdgfv
      541 ycpvndrvye ipdfsptikg ilwenwpmdk gvfvafdddk vytyvfhkdt iqgsriilag
      601 gtevpyshkp lllyngeltc qtpsgktnsi ylsthsflgn lkdfgpdmlr qmltqtlmlk
      661 rfseawevck llndqscwne lakaclhhme vdfairvyrt sgnagmvmsl eqvkgiedhn
      721 llaghlamft sdfnlaqdly lasscpiaal emrkdlqhwd ralqlakrla pdqipfiske
      781 yavqlefmgd yvnalahyek gitgnnkyqe hdevclagva qmsirmgdvr rgvnqamkhp
      841 srllkrdcga ilenmkqfse aaqlyekgqy ydkaasvyir cknwvkvgel lpqvsspkih
      901 lqyakakead gryteaviay ehakqwdsvi rlyldhlnnp ekavnivret qslegakmva
      961 rfflrlgdyg saiqflvmsk cnneaftlaq qhnkmeiyad iissesttne dyqsialyfe
     1021 aekkhfqagk ffllcgqygr alrhflqsps tednlamema ietvgrakde altnqlidyl
     1081 mgegdgmpqd akylfrlyma lkqhrdaart aiiiareeqc sgnyrnardv lfsmyselkt
     1141 qkikissema tnlmilhsyi lvkihvkrgd hmkgarmlir vanniskfps hivpiltsav
     1201 iechraglkn safsfaamlm rpeyrskidp kykkkietmv rrrdttetee pttacpycaf
     1261 qlpecellcp scknnlpyci atgrhmvrdd wtvcphcdfp alysefknll qtenvcpmcs
     1321 ekiniadlkk indcteylkl ededq
//
LOCUS       XP_041333971            1133 aa            linear   VRT 06-MAY-2021
DEFINITION  replication factor C subunit 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333971
VERSION     XP_041333971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1133
                     /product="replication factor C subunit 1 isoform X1"
                     /calculated_mol_wt=125822
     Region          <173..>561
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          383..461
                     /region_name="BRCT_RFC1"
                     /note="BRCT domain of replication factor C subunit 1
                     (RFC1) and similar proteins; cd17752"
                     /db_xref="CDD:349383"
     Site            order(395..397,404,417..421,433..439,442)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:349383"
     Region          565..1103
                     /region_name="PRK04195"
                     /note="replication factor C large subunit; Provisional"
                     /db_xref="CDD:235250"
     Region          894..1047
                     /region_name="RFC1"
                     /note="Replication factor RFC1 C terminal domain;
                     pfam08519"
                     /db_xref="CDD:462507"
     CDS             1..1133
                     /gene="RFC1"
                     /coded_by="XM_041478037.1:97..3498"
                     /db_xref="GeneID:121359209"
ORIGIN      
        1 mrdirkffgv vppgkrqqce avkksekikn gegpssgkkr eketkvnnsp seddskqkrt
       61 kkkrriiyds dseeeeqsvk kskkspekkt aaskpgkvlk qdpvvyiset dedddfadkr
      121 islkpkengt saigcpgtnt gkkeevkpqa kskplspvkq tptsaldffg trsvqrsekk
      181 lvaskrkeps qsrdstldde aiarqlqlee dselerqlhe deefartlam ldetpqkkka
      241 rkntegeqtv lsinsspnat agykqtervk atdsagaakn ysakpqtkse qlkgsclssq
      301 ssdgkkeeia ekergaqnsl srgkaasgke ekttpkkekv spkktesisp edsekkrnny
      361 qayrsflnre gpkalgskei pqgaencleg ltfvitgvle cierdeaksl ieryggkvtg
      421 nvskktnylv mgrdcgqskc ekasalgtki idedglfdli rtmpgkksky elaaeteakk
      481 veskpkktpq kaeagkknfs pykreannkk cnstpekget irsvkketta vrkltdfkrq
      541 tveekeapkp kgslvsevne dgserllwvd kykpvslkai igqqgeqsca nkllrwlrnw
      601 hknileggqa kpsktgskdd gtgfkaalls gppgvgkttt aalvckelgy syvelnasdt
      661 rsknslkevv aeslnntsik dfcsgasssv sgkhvlimde vdgmagnedr ggiqeliali
      721 rhtkvpiicm cndrnhpkmr slvhycldlr fqrprleqik gammsiafke glkipppamq
      781 eiilaanqdi rqvlhnlnmw cakdksltyd eaktdasrak kdiklgpfdv vrkvfatgee
      841 aarmslidks dlffhdysla plfvqenyvh vkpaaaggnl kkhlvllsra adsicdgdiv
      901 drqirskqsw nllptqaiya svlpgelmrg ymsqfpvfps wlgkfsstgk hdrviqelam
      961 htslrtqsck rtvnmeylsy lrdalvqplk dfgadgvqqa itfmdsyclm kedvenimei
     1021 stwggkpspf skldpkvkaa ftraynkeah ltpyslsavk askrqsgsaa tsdlsedltl
     1081 eeiqsdedeq dsvdsdamik qkkvkssklp krekneettk kegkrkektr hle
//
LOCUS       XP_041334051            1118 aa            linear   VRT 06-MAY-2021
DEFINITION  replication factor C subunit 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334051
VERSION     XP_041334051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1118
                     /product="replication factor C subunit 1 isoform X2"
                     /calculated_mol_wt=124164
     Region          <15..594
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          368..446
                     /region_name="BRCT_RFC1"
                     /note="BRCT domain of replication factor C subunit 1
                     (RFC1) and similar proteins; cd17752"
                     /db_xref="CDD:349383"
     Site            order(380..382,389,402..406,418..424,427)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:349383"
     Region          550..1088
                     /region_name="PRK04195"
                     /note="replication factor C large subunit; Provisional"
                     /db_xref="CDD:235250"
     Region          879..1032
                     /region_name="RFC1"
                     /note="Replication factor RFC1 C terminal domain;
                     pfam08519"
                     /db_xref="CDD:462507"
     CDS             1..1118
                     /gene="RFC1"
                     /coded_by="XM_041478117.1:97..3453"
                     /db_xref="GeneID:121359209"
ORIGIN      
        1 mrdirkffgv vppgkrqqce avkksekikn gegpssgkkr eketkvnnsp seddskqkrt
       61 kkkrriiyds dseeeeqsvk kskkspekkt aaskpdeddd fadkrislkp kengtsaigc
      121 pgtntgkkee vkpqakskpl spvkqtptsa ldffgtrsvq rsekklvask rkepsqsrds
      181 tlddeaiarq lqleedsele rqlhedeefa rtlamldetp qkkkarknte geqtvlsins
      241 spnatagykq tervkatdsa gaaknysakp qtkseqlkgs clssqssdgk keeiaekerg
      301 aqnslsrgka asgkeekttp kkekvspkkt esispedsek krnnyqayrs flnregpkal
      361 gskeipqgae nclegltfvi tgvlecierd eakslieryg gkvtgnvskk tnylvmgrdc
      421 gqskcekasa lgtkiidedg lfdlirtmpg kkskyelaae teakkveskp kktpqkaeag
      481 kknfspykre annkkcnstp ekgetirsvk kettavrklt dfkrqtveek eapkpkgslv
      541 sevnedgser llwvdkykpv slkaiigqqg eqscankllr wlrnwhknil eggqakpskt
      601 gskddgtgfk aallsgppgv gktttaalvc kelgysyvel nasdtrskns lkevvaesln
      661 ntsikdfcsg asssvsgkhv limdevdgma gnedrggiqe lialirhtkv piicmcndrn
      721 hpkmrslvhy cldlrfqrpr leqikgamms iafkeglkip ppamqeiila anqdirqvlh
      781 nlnmwcakdk sltydeaktd asrakkdikl gpfdvvrkvf atgeeaarms lidksdlffh
      841 dyslaplfvq enyvhvkpaa aggnlkkhlv llsraadsic dgdivdrqir skqswnllpt
      901 qaiyasvlpg elmrgymsqf pvfpswlgkf sstgkhdrvi qelamhtslr tqsckrtvnm
      961 eylsylrdal vqplkdfgad gvqqaitfmd syclmkedve nimeistwgg kpspfskldp
     1021 kvkaaftray nkeahltpys lsavkaskrq sgsaatsdls edltleeiqs dedeqdsvds
     1081 damikqkkvk ssklpkrekn eettkkegkr kektrhle
//
LOCUS       XP_041334136            1093 aa            linear   VRT 06-MAY-2021
DEFINITION  replication factor C subunit 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041334136
VERSION     XP_041334136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1093
                     /product="replication factor C subunit 1 isoform X3"
                     /calculated_mol_wt=121406
     Region          <17..569
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          343..421
                     /region_name="BRCT_RFC1"
                     /note="BRCT domain of replication factor C subunit 1
                     (RFC1) and similar proteins; cd17752"
                     /db_xref="CDD:349383"
     Site            order(355..357,364,377..381,393..399,402)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:349383"
     Region          525..1063
                     /region_name="PRK04195"
                     /note="replication factor C large subunit; Provisional"
                     /db_xref="CDD:235250"
     Region          854..1007
                     /region_name="RFC1"
                     /note="Replication factor RFC1 C terminal domain;
                     pfam08519"
                     /db_xref="CDD:462507"
     CDS             1..1093
                     /gene="RFC1"
                     /coded_by="XM_041478202.1:97..3378"
                     /db_xref="GeneID:121359209"
ORIGIN      
        1 mrdirkffgv vppgkrqqce avkksekikn gegpssgkkr eketkvnnsp seddskqkrt
       61 kkkrriiyds dedddfadkr islkpkengt saigcpgtnt gkkeevkpqa kskplspvkq
      121 tptsaldffg trsvqrsekk lvaskrkeps qsrdstldde aiarqlqlee dselerqlhe
      181 deefartlam ldetpqkkka rkntegeqtv lsinsspnat agykqtervk atdsagaakn
      241 ysakpqtkse qlkgsclssq ssdgkkeeia ekergaqnsl srgkaasgke ekttpkkekv
      301 spkktesisp edsekkrnny qayrsflnre gpkalgskei pqgaencleg ltfvitgvle
      361 cierdeaksl ieryggkvtg nvskktnylv mgrdcgqskc ekasalgtki idedglfdli
      421 rtmpgkksky elaaeteakk veskpkktpq kaeagkknfs pykreannkk cnstpekget
      481 irsvkketta vrkltdfkrq tveekeapkp kgslvsevne dgserllwvd kykpvslkai
      541 igqqgeqsca nkllrwlrnw hknileggqa kpsktgskdd gtgfkaalls gppgvgkttt
      601 aalvckelgy syvelnasdt rsknslkevv aeslnntsik dfcsgasssv sgkhvlimde
      661 vdgmagnedr ggiqeliali rhtkvpiicm cndrnhpkmr slvhycldlr fqrprleqik
      721 gammsiafke glkipppamq eiilaanqdi rqvlhnlnmw cakdksltyd eaktdasrak
      781 kdiklgpfdv vrkvfatgee aarmslidks dlffhdysla plfvqenyvh vkpaaaggnl
      841 kkhlvllsra adsicdgdiv drqirskqsw nllptqaiya svlpgelmrg ymsqfpvfps
      901 wlgkfsstgk hdrviqelam htslrtqsck rtvnmeylsy lrdalvqplk dfgadgvqqa
      961 itfmdsyclm kedvenimei stwggkpspf skldpkvkaa ftraynkeah ltpyslsavk
     1021 askrqsgsaa tsdlsedltl eeiqsdedeq dsvdsdamik qkkvkssklp krekneettk
     1081 kegkrkektr hle
//
LOCUS       XP_041334257             526 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 19 [Pyrgilauda ruficollis].
ACCESSION   XP_041334257
VERSION     XP_041334257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478323.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..526
                     /product="TBC1 domain family member 19"
                     /calculated_mol_wt=60031
     Region          248..466
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..526
                     /gene="TBC1D19"
                     /coded_by="XM_041478323.1:52..1632"
                     /db_xref="GeneID:121359369"
ORIGIN      
        1 mlepdrglsl tiarvvqrlq gsslhsqler qarvslhkpe ikleslkedi kdflktsgwe
       61 kklqnavyse lsvfpspchp aappehikep laymrkaqgs wekrilksln smctelnipl
      121 aqkrpaneqk ellnkwnemg tdepdlslfr pvyapkdfle vlmnlrnpny engeqpsfrn
      181 hlgliqvplk vkdipelkee fselglnigq lgiddsaqvp peffenehvc vgqkvlaeqd
      241 saaaqqyvrq gcptalradl walilnisnq pedilyyeql ksnviqhdll vdnliykdvk
      301 ltasnddyyf vfedylyqvl lcfsrdtsvl ehftyssatp pksyiqgklg meeyavfypp
      361 ngvipfhgfs myvaplcfly hepsklyqif remyvrfffr lhsisshpsg ivslcllfet
      421 llqthlpqlf yhlreigaqp lrisfkwmvr afsgylatdq llllwdrilg ynsleilavl
      481 aaavfafrav nlmevtslaa aeavladlst lkvmpllqif lfatvt
//
LOCUS       XP_041334371             237 aa            linear   VRT 06-MAY-2021
DEFINITION  extracellular superoxide dismutase [Cu-Zn] [Pyrgilauda ruficollis].
ACCESSION   XP_041334371
VERSION     XP_041334371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478437.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="extracellular superoxide dismutase [Cu-Zn]"
                     /calculated_mol_wt=26522
     Region          74..206
                     /region_name="Sod_Cu"
                     /note="Copper/zinc superoxide dismutase (SODC); pfam00080"
                     /db_xref="CDD:459663"
     CDS             1..237
                     /gene="SOD3"
                     /coded_by="XM_041478437.1:162..875"
                     /db_xref="GeneID:121359453"
ORIGIN      
        1 mflifslvtg ltlsasgvmt dketeslhei qkqvndlwqn llypvtrgnd tdgmiyasce
       61 mkpsskidad kpqvtgqvlf rqsysygrle alfyldgfpl dnnqssraih ihelgdlsng
      121 cdstgghynp frvnhprhpg dfgnflpreg kirkyktnlf atvfgpysim grsvviheqe
      181 ddmgkgnnka slengnagkr laccvigisn knlweeklpe vmdkkkrgln rrtynqa
//
LOCUS       XP_041334499             539 aa            linear   VRT 06-MAY-2021
DEFINITION  negative elongation factor A [Pyrgilauda ruficollis].
ACCESSION   XP_041334499
VERSION     XP_041334499.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478565.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..539
                     /product="negative elongation factor A"
                     /calculated_mol_wt=58610
     CDS             1..539
                     /gene="NELFA"
                     /coded_by="XM_041478565.1:122..1741"
                     /db_xref="GeneID:121359529"
ORIGIN      
        1 mpvenplffr sapkmasmre sdtglwlhnk lgstdelwap psiaslltas vidnirlcfh
       61 glssavklkl llgmlhlprr avdemkgalt eiiqlatlds dpwvlmvadi lksfpdtgsl
      121 nldleeqnpn vqdilgelre kvsecetsam lplecqylnk nalttlagpl tppvkhfqlk
      181 rkpksatlra ellqksteta qqlkktagvp fhakgrglvk kidtttplkg ipkqapfrst
      241 sapsvfspsg nrtpippsrt plrkergvkl ldiseldmvg agreakrrrk tldtevvekq
      301 akeetvvena tpdyaaglvs tqklgslnne palpstsylp atpsvvpsss yipssetqpa
      361 gsarealqtn rqteepaapn atttlpaqfk qrtpmynsns nppaatptsp ltpttppais
      421 paaqapqvap qtqqqpppkk slsltreqmy aaqemfktan kvtrpekali lgfmagsren
      481 pcqeqgdiiq iklsehtedl pkadgtgstt mlvdtvfemn yatgewtrfk kykpitnvs
//
LOCUS       XP_041334621             241 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-like protein family member 11B [Pyrgilauda ruficollis].
ACCESSION   XP_041334621
VERSION     XP_041334621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..241
                     /product="ras-like protein family member 11B"
                     /calculated_mol_wt=26944
     Region          29..197
                     /region_name="RERG_RasL11_like"
                     /note="Ras-related and Estrogen-Regulated Growth inhibitor
                     (RERG) and Ras-like 11 (RasL11)-like families; cd04146"
                     /db_xref="CDD:206713"
     Site            34..41
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206713"
     Site            order(35..36,83..84)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(37..42,55,146..147,149,176..178)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206713"
     Site            order(41..42,56,58,64..65,78..79,81,83..84,178)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(57..60,63..65)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206713"
     Site            order(57..58,62..65)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206713"
     Site            59
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206713"
     Site            81..84
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206713"
     Site            order(83..84,96..107)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206713"
     Site            146..149
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206713"
     Site            176..178
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206713"
     CDS             1..241
                     /gene="RASL11B"
                     /coded_by="XM_041478687.1:60..785"
                     /db_xref="GeneID:121359597"
ORIGIN      
        1 mrltqsmcti aecapggdgp atarprlvki avvggsgvgk talvvrfltr rfigdyerna
       61 gnlysrhiqv dgemlaiqvq dtpgvqiheh sldcneqlnr cirwadalvi vfsitdyksf
      121 ellshlyhhv rqlhpgnmvp vvivankadl lhikevepqq glqlanmlgc tfyevsvsen
      181 ynnvfnafhl lckevnkqqi tstperrrts liprpkspnm qdlkrrfkqa lsakvrtvts
      241 v
//
LOCUS       XP_041334749             885 aa            linear   VRT 06-MAY-2021
DEFINITION  NF-X1-type zinc finger protein NFXL1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334749
VERSION     XP_041334749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..885
                     /product="NF-X1-type zinc finger protein NFXL1"
                     /calculated_mol_wt=98317
     Region          133..195
                     /region_name="RING-CH-C4HC3_NFXL1"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     nuclear transcription factor, X-box binding-like 1 (NFXL1)
                     and similar proteins; cd16697"
                     /db_xref="CDD:438358"
     Region          283..331
                     /region_name="NF-X1-zinc-finger"
                     /note="Presumably a zinc binding domain, which has been
                     shown to bind to DNA in the human nuclear transcriptional
                     repressor NF-X1. The zinc finger can be characterized by
                     the pattern
                     C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1
                     zinc finger...; cd06008"
                     /db_xref="CDD:100116"
     Region          336..384
                     /region_name="NF-X1-zinc-finger"
                     /note="Presumably a zinc binding domain, which has been
                     shown to bind to DNA in the human nuclear transcriptional
                     repressor NF-X1. The zinc finger can be characterized by
                     the pattern
                     C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1
                     zinc finger...; cd06008"
                     /db_xref="CDD:100116"
     Region          389..437
                     /region_name="NF-X1-zinc-finger"
                     /note="Presumably a zinc binding domain, which has been
                     shown to bind to DNA in the human nuclear transcriptional
                     repressor NF-X1. The zinc finger can be characterized by
                     the pattern
                     C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1
                     zinc finger...; cd06008"
                     /db_xref="CDD:100116"
     Region          468..516
                     /region_name="NF-X1-zinc-finger"
                     /note="Presumably a zinc binding domain, which has been
                     shown to bind to DNA in the human nuclear transcriptional
                     repressor NF-X1. The zinc finger can be characterized by
                     the pattern
                     C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1
                     zinc finger...; cd06008"
                     /db_xref="CDD:100116"
     Region          675..722
                     /region_name="NF-X1-zinc-finger"
                     /note="Presumably a zinc binding domain, which has been
                     shown to bind to DNA in the human nuclear transcriptional
                     repressor NF-X1. The zinc finger can be characterized by
                     the pattern
                     C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1
                     zinc finger...; cd06008"
                     /db_xref="CDD:100116"
     Region          739..787
                     /region_name="NF-X1-zinc-finger"
                     /note="Presumably a zinc binding domain, which has been
                     shown to bind to DNA in the human nuclear transcriptional
                     repressor NF-X1. The zinc finger can be characterized by
                     the pattern
                     C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C. The NF-X1
                     zinc finger...; cd06008"
                     /db_xref="CDD:100116"
     CDS             1..885
                     /gene="NFXL1"
                     /coded_by="XM_041478815.1:146..2803"
                     /db_xref="GeneID:121359664"
ORIGIN      
        1 meaqwrqggr grgrgrpgde lparsgaaar ppaakgrgga raaaagavge gaselsslkk
       61 fdeikkanqa aakklvedql sssseddded aelkqgkild ktftiytsqt dgdaselert
      121 rqymneafqs gamtclicia svkrnqavws ccgcfcifhl vciqkwakds lflvssltdd
      181 dfgkkdypwp cpkcrfeykr setpsryycy cgkvenpavd pwlvphscgq icerefkpsc
      241 ghkclllchp gpcppcpkmv tttchckkak avprrcsake wscrlpcgrt llcgqhacen
      301 pchagdcqpc prvskqrcic grqtaerlca spqwqcdqvc gkclpcgnht ceqvchagsc
      361 gdcprsgkrs cpcgktkftl pctedvptcg dscdkvlecg ihkcsqrchr gpceicrqev
      421 ekqcrcgkht krmpchkpyl cetkctkird cqkhqcrrkc csgncppcdq vcgrtlgcrn
      481 hkcpsgchrg scnpcpetvd vkcncgktvi kvpcgrerti kppkckqlcs rpptchhstq
      541 ekhychfgrc ppcrqpcqkt lpcghlcpvs chdealvkqt glhqsagpwe qpsepafiqt
      601 alpcppcevp ipveclgqhe vsplpchaan pysckrfcgr lldcqnhtcv kechrvtksn
      661 ssadgkkagp ecsqceeect kprpagcphr cvlpchpgdc psclqmlkik chcklsvlyi
      721 eclkltcadv kekelliscr nqcpkelpcg hrckeichsg scplncsqkv kirclckrlk
      781 kevqcskiqe gqvslecdal ckemkrkaye ikeaeakaal eeekrrqqae leafenrlkg
      841 rrknkrrkde veveqsswqk yknlimlpvf gvavvmvawl mvynd
//
LOCUS       XP_041334875             366 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 46 [Pyrgilauda ruficollis].
ACCESSION   XP_041334875
VERSION     XP_041334875.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478941.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="ubiquitin carboxyl-terminal hydrolase 46"
                     /calculated_mol_wt=42360
     Region          36..363
                     /region_name="Peptidase_C19G"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02663"
                     /db_xref="CDD:239128"
     Site            order(39,44,313,329)
                     /site_type="active"
                     /db_xref="CDD:239128"
     CDS             1..366
                     /gene="USP46"
                     /coded_by="XM_041478941.1:516..1616"
                     /db_xref="GeneID:121359737"
ORIGIN      
        1 mtvrniasic nmgtnasale kdigpeqfpi nehyfglvnf gntcycnsvl qalyfcrpfr
       61 envlsykaqq kkkenlltcl adlfhsiatq kkkvgvippk kfisrlrken dlfdnymqqd
      121 aheflnylln tiadilqeek kqekqngklk ngnmneaeen nkqeltwvhe ifqgtltnet
      181 rclncetvss kdedfldlsv dveqntsith clrdfsntet lcseqkyyce tccskqeaqk
      241 rmrvkklpmi lalhlkrfky meqlhrytkl syrvvfplel rlfntsgdav nldrmydlva
      301 vvvhcgsgpn rghyitivks hgfwllfddd ivekidaqai eefygltsdi sknsesgyil
      361 fyqsre
//
LOCUS       XP_041335004             763 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335004
VERSION     XP_041335004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479070.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X1"
                     /calculated_mol_wt=83695
     Region          296..327
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          421..558
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(436,504,521)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(503..508,521,543,547)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          587..713
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(598,672,691)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(609,611,659..660,662..669,671,679,685,695,697,700,
                     704,707..708,710..711)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..763
                     /gene="APBB2"
                     /coded_by="XM_041479070.1:252..2543"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 mgrrypgahy rpsssfdsgv dalavfmasg satdvvnrns patppntlnl rsshnellna
       61 eirhtetkns tppkcrkkya ltniqtamgl sdpavqpllg ngsaniklvk ngenqlrkaa
      121 eqgqqdpnkn lgttagvsvt sekfesnepi pqdssgceil psqprrtksf lnyyadlets
      181 ardleqgfvg medksaqsns qastvivnge vlpqkqnkmp spedgqvatv ssspetkkdh
      241 pktgaktdca lhriqnlaps dedsswttls qdsaspsspd etadiwsdhs fqtdpdlppg
      301 wkkindiagi yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tekqpwsdfa
      361 vlnggkinsd iwkdlhaatv npdpslkefe gatlryaslk lrngpqsddd dscsinsdpe
      421 akcfavrslg wvemaeedla pgkssvavnn cirqlsyckn dirdtvgiwg egkdmylile
      481 ndmlnlidpm drtvlhsqpi vsirvwgvgr dngrdfayva rdkdtrilkc hvfrcdtpak
      541 aiatslheic skimaerkna kamacsslqd rtnvtldvpl qvdfptpkte lvqkfhvqyl
      601 gmlpvakpvg mdtlnsaies lmassskddw lpvtmnvada tvtvinerne eevmvecrvr
      661 flsfmgvgkd ihtfafimdt gnqhfechvf wcepnagnvs eavqaacmlr yqkclvarpp
      721 sqkarppppp adsvtrrvtt nvkrgvlsli dtlkqkrpvp emp
//
LOCUS       XP_041335078             763 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335078
VERSION     XP_041335078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X1"
                     /calculated_mol_wt=83695
     Region          296..327
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          421..558
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(436,504,521)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(503..508,521,543,547)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          587..713
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(598,672,691)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(609,611,659..660,662..669,671,679,685,695,697,700,
                     704,707..708,710..711)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..763
                     /gene="APBB2"
                     /coded_by="XM_041479144.1:537..2828"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 mgrrypgahy rpsssfdsgv dalavfmasg satdvvnrns patppntlnl rsshnellna
       61 eirhtetkns tppkcrkkya ltniqtamgl sdpavqpllg ngsaniklvk ngenqlrkaa
      121 eqgqqdpnkn lgttagvsvt sekfesnepi pqdssgceil psqprrtksf lnyyadlets
      181 ardleqgfvg medksaqsns qastvivnge vlpqkqnkmp spedgqvatv ssspetkkdh
      241 pktgaktdca lhriqnlaps dedsswttls qdsaspsspd etadiwsdhs fqtdpdlppg
      301 wkkindiagi yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tekqpwsdfa
      361 vlnggkinsd iwkdlhaatv npdpslkefe gatlryaslk lrngpqsddd dscsinsdpe
      421 akcfavrslg wvemaeedla pgkssvavnn cirqlsyckn dirdtvgiwg egkdmylile
      481 ndmlnlidpm drtvlhsqpi vsirvwgvgr dngrdfayva rdkdtrilkc hvfrcdtpak
      541 aiatslheic skimaerkna kamacsslqd rtnvtldvpl qvdfptpkte lvqkfhvqyl
      601 gmlpvakpvg mdtlnsaies lmassskddw lpvtmnvada tvtvinerne eevmvecrvr
      661 flsfmgvgkd ihtfafimdt gnqhfechvf wcepnagnvs eavqaacmlr yqkclvarpp
      721 sqkarppppp adsvtrrvtt nvkrgvlsli dtlkqkrpvp emp
//
LOCUS       XP_041335177             763 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335177
VERSION     XP_041335177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479243.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X1"
                     /calculated_mol_wt=83695
     Region          296..327
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          421..558
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(436,504,521)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(503..508,521,543,547)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          587..713
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(598,672,691)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(609,611,659..660,662..669,671,679,685,695,697,700,
                     704,707..708,710..711)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..763
                     /gene="APBB2"
                     /coded_by="XM_041479243.1:420..2711"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 mgrrypgahy rpsssfdsgv dalavfmasg satdvvnrns patppntlnl rsshnellna
       61 eirhtetkns tppkcrkkya ltniqtamgl sdpavqpllg ngsaniklvk ngenqlrkaa
      121 eqgqqdpnkn lgttagvsvt sekfesnepi pqdssgceil psqprrtksf lnyyadlets
      181 ardleqgfvg medksaqsns qastvivnge vlpqkqnkmp spedgqvatv ssspetkkdh
      241 pktgaktdca lhriqnlaps dedsswttls qdsaspsspd etadiwsdhs fqtdpdlppg
      301 wkkindiagi yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tekqpwsdfa
      361 vlnggkinsd iwkdlhaatv npdpslkefe gatlryaslk lrngpqsddd dscsinsdpe
      421 akcfavrslg wvemaeedla pgkssvavnn cirqlsyckn dirdtvgiwg egkdmylile
      481 ndmlnlidpm drtvlhsqpi vsirvwgvgr dngrdfayva rdkdtrilkc hvfrcdtpak
      541 aiatslheic skimaerkna kamacsslqd rtnvtldvpl qvdfptpkte lvqkfhvqyl
      601 gmlpvakpvg mdtlnsaies lmassskddw lpvtmnvada tvtvinerne eevmvecrvr
      661 flsfmgvgkd ihtfafimdt gnqhfechvf wcepnagnvs eavqaacmlr yqkclvarpp
      721 sqkarppppp adsvtrrvtt nvkrgvlsli dtlkqkrpvp emp
//
LOCUS       XP_041335269             763 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335269
VERSION     XP_041335269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X1"
                     /calculated_mol_wt=83695
     Region          296..327
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          421..558
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(436,504,521)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(503..508,521,543,547)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          587..713
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(598,672,691)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(609,611,659..660,662..669,671,679,685,695,697,700,
                     704,707..708,710..711)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..763
                     /gene="APBB2"
                     /coded_by="XM_041479335.1:221..2512"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 mgrrypgahy rpsssfdsgv dalavfmasg satdvvnrns patppntlnl rsshnellna
       61 eirhtetkns tppkcrkkya ltniqtamgl sdpavqpllg ngsaniklvk ngenqlrkaa
      121 eqgqqdpnkn lgttagvsvt sekfesnepi pqdssgceil psqprrtksf lnyyadlets
      181 ardleqgfvg medksaqsns qastvivnge vlpqkqnkmp spedgqvatv ssspetkkdh
      241 pktgaktdca lhriqnlaps dedsswttls qdsaspsspd etadiwsdhs fqtdpdlppg
      301 wkkindiagi yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tekqpwsdfa
      361 vlnggkinsd iwkdlhaatv npdpslkefe gatlryaslk lrngpqsddd dscsinsdpe
      421 akcfavrslg wvemaeedla pgkssvavnn cirqlsyckn dirdtvgiwg egkdmylile
      481 ndmlnlidpm drtvlhsqpi vsirvwgvgr dngrdfayva rdkdtrilkc hvfrcdtpak
      541 aiatslheic skimaerkna kamacsslqd rtnvtldvpl qvdfptpkte lvqkfhvqyl
      601 gmlpvakpvg mdtlnsaies lmassskddw lpvtmnvada tvtvinerne eevmvecrvr
      661 flsfmgvgkd ihtfafimdt gnqhfechvf wcepnagnvs eavqaacmlr yqkclvarpp
      721 sqkarppppp adsvtrrvtt nvkrgvlsli dtlkqkrpvp emp
//
LOCUS       XP_041335357             763 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335357
VERSION     XP_041335357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479423.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X1"
                     /calculated_mol_wt=83695
     Region          296..327
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          421..558
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(436,504,521)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(503..508,521,543,547)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          587..713
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(598,672,691)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(609,611,659..660,662..669,671,679,685,695,697,700,
                     704,707..708,710..711)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..763
                     /gene="APBB2"
                     /coded_by="XM_041479423.1:179..2470"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 mgrrypgahy rpsssfdsgv dalavfmasg satdvvnrns patppntlnl rsshnellna
       61 eirhtetkns tppkcrkkya ltniqtamgl sdpavqpllg ngsaniklvk ngenqlrkaa
      121 eqgqqdpnkn lgttagvsvt sekfesnepi pqdssgceil psqprrtksf lnyyadlets
      181 ardleqgfvg medksaqsns qastvivnge vlpqkqnkmp spedgqvatv ssspetkkdh
      241 pktgaktdca lhriqnlaps dedsswttls qdsaspsspd etadiwsdhs fqtdpdlppg
      301 wkkindiagi yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tekqpwsdfa
      361 vlnggkinsd iwkdlhaatv npdpslkefe gatlryaslk lrngpqsddd dscsinsdpe
      421 akcfavrslg wvemaeedla pgkssvavnn cirqlsyckn dirdtvgiwg egkdmylile
      481 ndmlnlidpm drtvlhsqpi vsirvwgvgr dngrdfayva rdkdtrilkc hvfrcdtpak
      541 aiatslheic skimaerkna kamacsslqd rtnvtldvpl qvdfptpkte lvqkfhvqyl
      601 gmlpvakpvg mdtlnsaies lmassskddw lpvtmnvada tvtvinerne eevmvecrvr
      661 flsfmgvgkd ihtfafimdt gnqhfechvf wcepnagnvs eavqaacmlr yqkclvarpp
      721 sqkarppppp adsvtrrvtt nvkrgvlsli dtlkqkrpvp emp
//
LOCUS       XP_041335430             762 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335430
VERSION     XP_041335430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..762
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X2"
                     /calculated_mol_wt=83624
     Region          295..326
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(310,321)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          420..557
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(435,503,520)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(502..507,520,542,546)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          586..712
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(597,671,690)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(608,610,658..659,661..668,670,678,684,694,696,699,
                     703,706..707,709..710)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..762
                     /gene="APBB2"
                     /coded_by="XM_041479496.1:252..2540"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 mgrrypgahy rpsssfdsgv dalavfmasg satdvvnrns patppntlnl rsshnellna
       61 eirhtetkns tppkcrkkya ltniqtamgl sdpavqpllg ngsaniklvk ngenqlrkaa
      121 eqgqqdpnkn lgttagvsvt sekfesnepi pqdssgceil psqprrtksf lnyyadlets
      181 ardleqgfvg medksaqsns qastvivnge vlpqkqnkmp spedgqvatv ssspetkkdh
      241 pktgaktdca lhriqnlaps dedsswttls qdsaspsspd etdiwsdhsf qtdpdlppgw
      301 kkindiagiy ywhiptgttq wqrpvsiptd lqgsrkgslg sitpsptpet ekqpwsdfav
      361 lnggkinsdi wkdlhaatvn pdpslkefeg atlryaslkl rngpqsdddd scsinsdpea
      421 kcfavrslgw vemaeedlap gkssvavnnc irqlsycknd irdtvgiwge gkdmylilen
      481 dmlnlidpmd rtvlhsqpiv sirvwgvgrd ngrdfayvar dkdtrilkch vfrcdtpaka
      541 iatslheics kimaerknak amacsslqdr tnvtldvplq vdfptpktel vqkfhvqylg
      601 mlpvakpvgm dtlnsaiesl massskddwl pvtmnvadat vtvinernee evmvecrvrf
      661 lsfmgvgkdi htfafimdtg nqhfechvfw cepnagnvse avqaacmlry qkclvarpps
      721 qkarpppppa dsvtrrvttn vkrgvlslid tlkqkrpvpe mp
//
LOCUS       XP_041335502             754 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041335502
VERSION     XP_041335502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..754
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X3"
                     /calculated_mol_wt=82599
     Region          287..318
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(302,313)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          412..549
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(427,495,512)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(494..499,512,534,538)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          578..704
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(589,663,682)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(600,602,650..651,653..660,662,670,676,686,688,691,
                     695,698..699,701..702)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..754
                     /gene="APBB2"
                     /coded_by="XM_041479568.1:348..2612"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 msevlpvdsg vdalavfmas gsatdvvnrn spatppntln lrsshnelln aeirhtetkn
       61 stppkcrkky altniqtamg lsdpavqpll gngsaniklv kngenqlrka aeqgqqdpnk
      121 nlgttagvsv tsekfesnep ipqdssgcei lpsqprrtks flnyyadlet sardleqgfv
      181 gmedksaqsn sqastvivng evlpqkqnkm pspedgqvat vssspetkkd hpktgaktdc
      241 alhriqnlap sdedsswttl sqdsaspssp detadiwsdh sfqtdpdlpp gwkkindiag
      301 iyywhiptgt tqwqrpvsip tdlqgsrkgs lgsitpsptp etekqpwsdf avlnggkins
      361 diwkdlhaat vnpdpslkef egatlryasl klrngpqsdd ddscsinsdp eakcfavrsl
      421 gwvemaeedl apgkssvavn ncirqlsyck ndirdtvgiw gegkdmylil endmlnlidp
      481 mdrtvlhsqp ivsirvwgvg rdngrdfayv ardkdtrilk chvfrcdtpa kaiatslhei
      541 cskimaerkn akamacsslq drtnvtldvp lqvdfptpkt elvqkfhvqy lgmlpvakpv
      601 gmdtlnsaie slmassskdd wlpvtmnvad atvtvinern eeevmvecrv rflsfmgvgk
      661 dihtfafimd tgnqhfechv fwcepnagnv seavqaacml ryqkclvarp psqkarpppp
      721 padsvtrrvt tnvkrgvlsl idtlkqkrpv pemp
//
LOCUS       XP_041335586             753 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041335586
VERSION     XP_041335586.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479652.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X4"
                     /calculated_mol_wt=82528
     Region          286..317
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(301,312)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          411..548
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(426,494,511)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(493..498,511,533,537)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          577..703
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(588,662,681)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(599,601,649..650,652..659,661,669,675,685,687,690,
                     694,697..698,700..701)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..753
                     /gene="APBB2"
                     /coded_by="XM_041479652.1:348..2609"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 msevlpvdsg vdalavfmas gsatdvvnrn spatppntln lrsshnelln aeirhtetkn
       61 stppkcrkky altniqtamg lsdpavqpll gngsaniklv kngenqlrka aeqgqqdpnk
      121 nlgttagvsv tsekfesnep ipqdssgcei lpsqprrtks flnyyadlet sardleqgfv
      181 gmedksaqsn sqastvivng evlpqkqnkm pspedgqvat vssspetkkd hpktgaktdc
      241 alhriqnlap sdedsswttl sqdsaspssp detdiwsdhs fqtdpdlppg wkkindiagi
      301 yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tekqpwsdfa vlnggkinsd
      361 iwkdlhaatv npdpslkefe gatlryaslk lrngpqsddd dscsinsdpe akcfavrslg
      421 wvemaeedla pgkssvavnn cirqlsyckn dirdtvgiwg egkdmylile ndmlnlidpm
      481 drtvlhsqpi vsirvwgvgr dngrdfayva rdkdtrilkc hvfrcdtpak aiatslheic
      541 skimaerkna kamacsslqd rtnvtldvpl qvdfptpkte lvqkfhvqyl gmlpvakpvg
      601 mdtlnsaies lmassskddw lpvtmnvada tvtvinerne eevmvecrvr flsfmgvgkd
      661 ihtfafimdt gnqhfechvf wcepnagnvs eavqaacmlr yqkclvarpp sqkarppppp
      721 adsvtrrvtt nvkrgvlsli dtlkqkrpvp emp
//
LOCUS       XP_041335670             742 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041335670
VERSION     XP_041335670.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479736.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..742
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X5"
                     /calculated_mol_wt=81309
     Region          296..327
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          400..537
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(415,483,500)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(482..487,500,522,526)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          566..692
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(577,651,670)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(588,590,638..639,641..648,650,658,664,674,676,679,
                     683,686..687,689..690)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..742
                     /gene="APBB2"
                     /coded_by="XM_041479736.1:252..2480"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 mgrrypgahy rpsssfdsgv dalavfmasg satdvvnrns patppntlnl rsshnellna
       61 eirhtetkns tppkcrkkya ltniqtamgl sdpavqpllg ngsaniklvk ngenqlrkaa
      121 eqgqqdpnkn lgttagvsvt sekfesnepi pqdssgceil psqprrtksf lnyyadlets
      181 ardleqgfvg medksaqsns qastvivnge vlpqkqnkmp spedgqvatv ssspetkkdh
      241 pktgaktdca lhriqnlaps dedsswttls qdsaspsspd etadiwsdhs fqtdpdlppg
      301 wkkindiagi yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tedlhaatvn
      361 pdpslkefeg atlryaslkl rngpqsdddd scsinsdpea kcfavrslgw vemaeedlap
      421 gkssvavnnc irqlsycknd irdtvgiwge gkdmylilen dmlnlidpmd rtvlhsqpiv
      481 sirvwgvgrd ngrdfayvar dkdtrilkch vfrcdtpaka iatslheics kimaerknak
      541 amacsslqdr tnvtldvplq vdfptpktel vqkfhvqylg mlpvakpvgm dtlnsaiesl
      601 massskddwl pvtmnvadat vtvinernee evmvecrvrf lsfmgvgkdi htfafimdtg
      661 nqhfechvfw cepnagnvse avqaacmlry qkclvarpps qkarpppppa dsvtrrvttn
      721 vkrgvlslid tlkqkrpvpe mp
//
LOCUS       XP_041335764             733 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041335764
VERSION     XP_041335764.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479830.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..733
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X6"
                     /calculated_mol_wt=80214
     Region          287..318
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(302,313)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          391..528
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(406,474,491)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(473..478,491,513,517)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          557..683
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(568,642,661)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(579,581,629..630,632..639,641,649,655,665,667,670,
                     674,677..678,680..681)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..733
                     /gene="APBB2"
                     /coded_by="XM_041479830.1:348..2549"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 msevlpvdsg vdalavfmas gsatdvvnrn spatppntln lrsshnelln aeirhtetkn
       61 stppkcrkky altniqtamg lsdpavqpll gngsaniklv kngenqlrka aeqgqqdpnk
      121 nlgttagvsv tsekfesnep ipqdssgcei lpsqprrtks flnyyadlet sardleqgfv
      181 gmedksaqsn sqastvivng evlpqkqnkm pspedgqvat vssspetkkd hpktgaktdc
      241 alhriqnlap sdedsswttl sqdsaspssp detadiwsdh sfqtdpdlpp gwkkindiag
      301 iyywhiptgt tqwqrpvsip tdlqgsrkgs lgsitpsptp etedlhaatv npdpslkefe
      361 gatlryaslk lrngpqsddd dscsinsdpe akcfavrslg wvemaeedla pgkssvavnn
      421 cirqlsyckn dirdtvgiwg egkdmylile ndmlnlidpm drtvlhsqpi vsirvwgvgr
      481 dngrdfayva rdkdtrilkc hvfrcdtpak aiatslheic skimaerkna kamacsslqd
      541 rtnvtldvpl qvdfptpkte lvqkfhvqyl gmlpvakpvg mdtlnsaies lmassskddw
      601 lpvtmnvada tvtvinerne eevmvecrvr flsfmgvgkd ihtfafimdt gnqhfechvf
      661 wcepnagnvs eavqaacmlr yqkclvarpp sqkarppppp adsvtrrvtt nvkrgvlsli
      721 dtlkqkrpvp emp
//
LOCUS       XP_041335856             732 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041335856
VERSION     XP_041335856.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479922.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X7"
                     /calculated_mol_wt=80143
     Region          286..317
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(301,312)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          390..527
                     /region_name="PTB1_Fe65"
                     /note="Fe65 N-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01272"
                     /db_xref="CDD:269970"
     Site            order(405,473,490)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269970"
     Site            order(472..477,490,512,516)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269970"
     Region          556..682
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(567,641,660)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(578,580,628..629,631..638,640,648,654,664,666,669,
                     673,676..677,679..680)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..732
                     /gene="APBB2"
                     /coded_by="XM_041479922.1:348..2546"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 msevlpvdsg vdalavfmas gsatdvvnrn spatppntln lrsshnelln aeirhtetkn
       61 stppkcrkky altniqtamg lsdpavqpll gngsaniklv kngenqlrka aeqgqqdpnk
      121 nlgttagvsv tsekfesnep ipqdssgcei lpsqprrtks flnyyadlet sardleqgfv
      181 gmedksaqsn sqastvivng evlpqkqnkm pspedgqvat vssspetkkd hpktgaktdc
      241 alhriqnlap sdedsswttl sqdsaspssp detdiwsdhs fqtdpdlppg wkkindiagi
      301 yywhiptgtt qwqrpvsipt dlqgsrkgsl gsitpsptpe tedlhaatvn pdpslkefeg
      361 atlryaslkl rngpqsdddd scsinsdpea kcfavrslgw vemaeedlap gkssvavnnc
      421 irqlsycknd irdtvgiwge gkdmylilen dmlnlidpmd rtvlhsqpiv sirvwgvgrd
      481 ngrdfayvar dkdtrilkch vfrcdtpaka iatslheics kimaerknak amacsslqdr
      541 tnvtldvplq vdfptpktel vqkfhvqylg mlpvakpvgm dtlnsaiesl massskddwl
      601 pvtmnvadat vtvinernee evmvecrvrf lsfmgvgkdi htfafimdtg nqhfechvfw
      661 cepnagnvse avqaacmlry qkclvarpps qkarpppppa dsvtrrvttn vkrgvlslid
      721 tlkqkrpvpe mp
//
LOCUS       XP_041335937             210 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 2 isoform
            X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041335937
VERSION     XP_041335937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480003.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 2 isoform X8"
                     /calculated_mol_wt=23257
     Region          34..160
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(45,119,138)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(56,58,106..107,109..116,118,126,132,142,144,147,151,
                     154..155,157..158)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..210
                     /gene="APBB2"
                     /coded_by="XM_041480003.1:229..861"
                     /db_xref="GeneID:121359803"
ORIGIN      
        1 maerknakam acsslqdrtn vtldvplqvd fptpktelvq kfhvqylgml pvakpvgmdt
       61 lnsaieslma ssskddwlpv tmnvadatvt vinerneeev mvecrvrfls fmgvgkdiht
      121 fafimdtgnq hfechvfwce pnagnvseav qaacmlryqk clvarppsqk arpppppads
      181 vtrrvttnvk rgvlslidtl kqkrpvpemp
//
LOCUS       XP_041336064             373 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041336064
VERSION     XP_041336064.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480130.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="LIM domain-binding protein 2 isoform X1"
                     /calculated_mol_wt=42680
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          298..326
                     /region_name="LID"
                     /note="LIM interaction domain (LID); pfam17916"
                     /db_xref="CDD:465564"
     CDS             1..373
                     /gene="LDB2"
                     /coded_by="XM_041480130.1:587..1708"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappaept rqpttkrrkr knstsstsns sagnnanstn skkksaaanl slssqvpdvm
      301 vvgeptlmgg efgdederli trlentqyda angmddeedf nnspalgnns pwnskpaanq
      361 etksenptpq asq
//
LOCUS       XP_041336145             372 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041336145
VERSION     XP_041336145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480211.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="LIM domain-binding protein 2 isoform X2"
                     /calculated_mol_wt=42609
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          297..325
                     /region_name="LID"
                     /note="LIM interaction domain (LID); pfam17916"
                     /db_xref="CDD:465564"
     CDS             1..372
                     /gene="LDB2"
                     /coded_by="XM_041480211.1:587..1705"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappeptr qpttkrrkrk nstsstsnss agnnanstns kkksaaanls lssqvpdvmv
      301 vgeptlmgge fgdederlit rlentqydaa ngmddeedfn nspalgnnsp wnskpaanqe
      361 tksenptpqa sq
//
LOCUS       XP_041336223             371 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041336223
VERSION     XP_041336223.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480289.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="LIM domain-binding protein 2 isoform X3"
                     /calculated_mol_wt=42484
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          296..324
                     /region_name="LID"
                     /note="LIM interaction domain (LID); pfam17916"
                     /db_xref="CDD:465564"
     CDS             1..371
                     /gene="LDB2"
                     /coded_by="XM_041480289.1:588..1703"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappaept rqpttkrrkr knstsstsns sagnnanstn skkksaaanl slssqdvmvv
      301 geptlmggef gdederlitr lentqydaan gmddeedfnn spalgnnspw nskpaanqet
      361 ksenptpqas q
//
LOCUS       XP_041336299             370 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041336299
VERSION     XP_041336299.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480365.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="LIM domain-binding protein 2 isoform X4"
                     /calculated_mol_wt=42413
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          295..323
                     /region_name="LID"
                     /note="LIM interaction domain (LID); pfam17916"
                     /db_xref="CDD:465564"
     CDS             1..370
                     /gene="LDB2"
                     /coded_by="XM_041480365.1:589..1701"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappeptr qpttkrrkrk nstsstsnss agnnanstns kkksaaanls lssqdvmvvg
      301 eptlmggefg dederlitrl entqydaang mddeedfnns palgnnspwn skpaanqetk
      361 senptpqasq
//
LOCUS       XP_041336382             349 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041336382
VERSION     XP_041336382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480448.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..349
                     /product="LIM domain-binding protein 2 isoform X5"
                     /calculated_mol_wt=39823
     Region          7..208
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     Region          274..302
                     /region_name="LID"
                     /note="LIM interaction domain (LID); pfam17916"
                     /db_xref="CDD:465564"
     CDS             1..349
                     /gene="LDB2"
                     /coded_by="XM_041480448.1:552..1601"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 mvqpeyriye mnkrlqsrte dsdnlwwdaf ateffeddat ltlsfcledg pkrytigrtl
       61 ipryfstvfe ggvtdlyyil khskesyhns sitvdcdqct mvtqhgkpmf tkvctegrli
      121 leftfddlmr iktwhftirq yrelvprsil amhaqdpqvl eqlsknitrm gltnftlnyl
      181 rlcvilepmq elmsrhktyn lsprdclktc lfqkwqrmva ppaeptrqpt tkrrkrknst
      241 sstsnssagn nanstnskkk saaanlslss qvpdvmvvge ptlmggefgd ederlitrle
      301 ntqydaangm ddeedfnnsp algnnspwns kpaanqetks enptpqasq
//
LOCUS       XP_041336469             331 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041336469
VERSION     XP_041336469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="LIM domain-binding protein 2 isoform X6"
                     /calculated_mol_wt=37947
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     CDS             1..331
                     /gene="LDB2"
                     /coded_by="XM_041480535.1:593..1588"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappaept rqpttkrrkr knstsstsns sagnnanstn skkksaaanl slssqvpelg
      301 alqscslnpg rdgalchsta vtptgqfkek h
//
LOCUS       XP_041336554             330 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041336554
VERSION     XP_041336554.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480620.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..330
                     /product="LIM domain-binding protein 2 isoform X7"
                     /calculated_mol_wt=37876
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     CDS             1..330
                     /gene="LDB2"
                     /coded_by="XM_041480620.1:594..1586"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappeptr qpttkrrkrk nstsstsnss agnnanstns kkksaaanls lssqvpelga
      301 lqscslnpgr dgalchstav tptgqfkekh
//
LOCUS       XP_041336631             329 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041336631
VERSION     XP_041336631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="LIM domain-binding protein 2 isoform X8"
                     /calculated_mol_wt=37751
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     CDS             1..329
                     /gene="LDB2"
                     /coded_by="XM_041480697.1:593..1582"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappaept rqpttkrrkr knstsstsns sagnnanstn skkksaaanl slssqelgal
      301 qscslnpgrd galchstavt ptgqfkekh
//
LOCUS       XP_041336716             300 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041336716
VERSION     XP_041336716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="LIM domain-binding protein 2 isoform X9"
                     /calculated_mol_wt=34711
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     CDS             1..300
                     /gene="LDB2"
                     /coded_by="XM_041480782.1:591..1493"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappaept rqpttkrrkr knstsstsns sagnnanstn skkksaaanl slssqvpvsi
//
LOCUS       XP_041336789             298 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 2 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041336789
VERSION     XP_041336789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="LIM domain-binding protein 2 isoform X10"
                     /calculated_mol_wt=34514
     Region          31..232
                     /region_name="LIM_bind"
                     /note="LIM-domain binding protein; pfam01803"
                     /db_xref="CDD:426444"
     CDS             1..298
                     /gene="LDB2"
                     /coded_by="XM_041480855.1:591..1487"
                     /db_xref="GeneID:121360326"
ORIGIN      
        1 msstphdpfy sspfgpfyrr htpymvqpey riyemnkrlq srtedsdnlw wdafateffe
       61 ddatltlsfc ledgpkryti grtlipryfs tvfeggvtdl yyilkhskes yhnssitvdc
      121 dqctmvtqhg kpmftkvcte grlileftfd dlmriktwhf tirqyrelvp rsilamhaqd
      181 pqvleqlskn itrmgltnft lnylrlcvil epmqelmsrh ktynlsprdc lktclfqkwq
      241 rmvappaept rqpttkrrkr knstsstsns sagnnanstn skkksaaanl slssqvsi
//
LOCUS       XP_041336916             315 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-sarcoglycan [Pyrgilauda ruficollis].
ACCESSION   XP_041336916
VERSION     XP_041336916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480982.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="beta-sarcoglycan"
                     /calculated_mol_wt=34538
     Region          51..300
                     /region_name="Sarcoglycan_1"
                     /note="Sarcoglycan complex subunit protein; pfam04790"
                     /db_xref="CDD:461428"
     CDS             1..315
                     /gene="SGCB"
                     /coded_by="XM_041480982.1:61..1008"
                     /db_xref="GeneID:121360833"
ORIGIN      
        1 maaaapeqqs sngpvkksmr ekaverrnvn kehnsnfkag yipidedrlh ktglrgrkgn
       61 laicvivvlf ilavinliit lviwavirig pngcdsmefh esgllrfkqv sdmgvihply
      121 kstvggrrne dlvitgnnqp ivfqqgttkl svekdktsit sdigmefvdp rtqntlfstd
      181 yethefhlpn gvkilnvqka steritsnat sdlnikvdgr aivrgnegvf itgktiefrm
      241 ggnmelkaen siilngtvmv spsrlpsssy geqfnngnwl rfklcmcadg tlfkvqvtgh
      301 nmgcqtsanp cgath
//
LOCUS       XP_041337038             533 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: mitochondria-eating protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337038
VERSION     XP_041337038.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481104.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..533
                     /product="LOW QUALITY PROTEIN: mitochondria-eating
                     protein"
                     /calculated_mol_wt=59027
     Region          109..>175
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          300..490
                     /region_name="MIEAP"
                     /note="Mitochondria-eating protein; pfam16026"
                     /db_xref="CDD:464982"
     CDS             1..533
                     /gene="SPATA18"
                     /coded_by="XM_041481104.1:158..1759"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121360903"
ORIGIN      
        1 makdlknlvg agrarelqek leswqqnyeg nsadenlsrc ceilelnsai qkqlfsilne
       61 tsqgdecaak ikscllpsvc yasgsdnltq dstegelqlr dlackpkcef qdledklset
      121 raqinlmerd lkcsraepcs lkrlqqldey eqkienlrde iamldcrksv iqsrlacgrt
      181 csppcrltac sstmpsegll sstvpsegll sslsseglls stvpfeglls stvrcqalcq
      241 alcqalcqal cqalclsstm pcetlcqalc qalcpsfqvp cplrealfts paqagqcshr
      301 acliarynfi yakerleaea alrryfcdle tvqrivytaa vesfraakva fwkvkinvkd
      361 tlaichrggp ssleigvldy iachkdlydv cysvhdvvcs mnknprlpcp gevdfvvisg
      421 lirelcclaf amqtlippld isfgidgecf nrnmyyrsfd sdftapfvay hvwpaliedg
      481 tvivkgevvt kkmvmcprrc rirsrscscg rpllcgpvar srslstvrvk rrc
//
LOCUS       XP_041337169             447 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 2, regulatory subunit B, gamma [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337169
VERSION     XP_041337169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..447
                     /product="protein phosphatase 2, regulatory subunit B,
                     gamma"
                     /calculated_mol_wt=51571
     Region          17..438
                     /region_name="CDC55"
                     /note="Serine/threonine protein phosphatase 2A, regulatory
                     subunit [Signal transduction mechanisms]; COG5170"
                     /db_xref="CDD:227498"
     Region          27..75
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          93..171
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..212
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..277
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          284..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          341..376
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          415..438
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..447
                     /gene="PPP2R2C"
                     /coded_by="XM_041481235.1:26..1369"
                     /db_xref="GeneID:121360962"
ORIGIN      
        1 mgedtdtrki nhsflrdhny vteadiistv efnhtgella tgdkggrvvi fqrepeskne
       61 pynqgeynvy stfqshepef dylksleiee kinkikwlpq qnaahsllst ndktiklwki
      121 terdkrpegy nlkdeegklk dlstvtslqv pvlkpmdlmv evtprrifan ghtyhvnsis
      181 vnsdcetyms addlrinlwh laitdrsfni vdikpanmed ltevitasef hphhcnlfvy
      241 ssskgslrlc dmrasalcdk hsklyeeped psnrsffsei issvsdvkfs hsgrymltrd
      301 yltvkvwdln metkpvetyq vhdylrsklc slyendcifd kfecawngsd svimtgaynn
      361 ffrmfdrntk rdvtleasre sskprailkp rrvcvggkrr kddisvdsld ftkkilhtaw
      421 hpteniiaia atnnlyifqd kvnsemh
//
LOCUS       XP_041337287             229 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell surface glycoprotein CD8 alpha chain [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337287
VERSION     XP_041337287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481353.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="T-cell surface glycoprotein CD8 alpha chain"
                     /calculated_mol_wt=25577
     Region          31..135
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          44..48
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          55..59
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          114..119
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          128..131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..229
                     /gene="CD8A"
                     /coded_by="XM_041481353.1:44..733"
                     /db_xref="GeneID:121361022"
ORIGIN      
        1 mdtspallll ltlgfccpgi ygqslqikvr spkditqlqv gqklelecht dknhgaswir
       61 qdrsgtlhfi vfinpmarat fegsqrtshr feaskdntiy rlavksftpq degsyfcvmn
      121 fnqmlhfspg lhaflpvtti vapstpgltt qrgitedpdl ttpdpegrmq enlnffchif
      181 iwvplagall lllialviti vlcqqtrrrr crckrpangk pptkprtan
//
LOCUS       XP_041337422             716 aa            linear   VRT 06-MAY-2021
DEFINITION  MICOS complex subunit MIC60 [Pyrgilauda ruficollis].
ACCESSION   XP_041337422
VERSION     XP_041337422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..716
                     /product="MICOS complex subunit MIC60"
                     /calculated_mol_wt=79422
     Region          43..706
                     /region_name="Mitofilin"
                     /note="Mitochondrial inner membrane protein; pfam09731"
                     /db_xref="CDD:430783"
     CDS             1..716
                     /gene="IMMT"
                     /coded_by="XM_041481488.1:112..2262"
                     /db_xref="GeneID:121361085"
ORIGIN      
        1 mlracrragl aaakqnsrcv raslrpsrly rgyathsges gvsvgkiiga gllfvgggig
       61 gtvlyasydr qfresvekai pysdklfema lgpapsstpv skkpihqgpl kissvaevmk
      121 eskqpapksq igkpegaapt eekggkqheg shaikerppe evaarlaqqd keeqekvsal
      181 aatlegalnt tarvtlqait aqesavqavn ahsqilkdam ddsedaggkk ssqwrtleea
      241 lkdrrravde aadallkake elektkgvie rakksqlaga kphivaaeen lhhmivdldn
      301 vvkkvqaaqs eakivaqyhe lvakareefq keldsitpdv kpgwkgmkit dlagqlstdd
      361 lnsliahahr ridqlnrela eqrvreqqhi etalekqkle dkkafeaava kalerhknei
      421 eleqerkvee vrevmetemr tqlrrqaaah tdhlrdvlki qeqdlkvefe qnlseklseq
      481 emqfrrltqe qldnftldin tayarlkgie qaveshavae eearkahqlw lsvealkycm
      541 rsgtgdspte plgsavkaik ascadnafte altaalpees ltrgvyseea lrarfytvqk
      601 lakrvamide trnslyqyfl sylqsllvfh pqqlkppael spddldtfkl lsyasycieh
      661 gdlelaakfv nqlrgesrrv ahdwltearm tletkqivdi ltayasavgl gttqvq
//
LOCUS       XP_041337547             172 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L35, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041337547
VERSION     XP_041337547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481613.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="39S ribosomal protein L35, mitochondrial"
                     /calculated_mol_wt=19511
     Region          86..145
                     /region_name="Ribosomal_L35p"
                     /note="Ribosomal protein L35; pfam01632"
                     /db_xref="CDD:460273"
     CDS             1..172
                     /gene="MRPL35"
                     /coded_by="XM_041481613.1:51..569"
                     /db_xref="GeneID:121361148"
ORIGIN      
        1 mamaaargal agilrrwapr alplggpsar cvgrgpapap lwtprllsen rpragtpsvl
       61 ssvtpllpsl lqqparslty cslrkgkrks vkavvkrflr lhnglwvrrk sgykkklwkk
      121 saaqkkrlre lvlctrtqck lldkmttsfw krrnwyvddp fqkyhdrtnl rv
//
LOCUS       XP_041337679            1778 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337679
VERSION     XP_041337679.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481745.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 5 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1778
                     /product="LOW QUALITY PROTEIN: DNA-directed RNA polymerase
                     I subunit RPA1"
                     /calculated_mol_wt=199961
     Region          85..1072
                     /region_name="RNAP_I_RPA1_N"
                     /note="Largest subunit (RPA1) of eukaryotic RNA polymerase
                     I (RNAP I), N-terminal domain; cd01435"
                     /db_xref="CDD:259844"
     Site            order(133,136,143,146)
                     /site_type="other"
                     /note="Zn-binding [ion binding]"
                     /db_xref="CDD:259844"
     Site            order(494,499,506,512,621..623,657,659,661,1054..1055)
                     /site_type="active"
                     /note="putative active site region [active]"
                     /db_xref="CDD:259844"
     Region          1159..1206
                     /region_name="HMG-box_SF"
                     /note="high mobility group (HMG)-box domain superfamily;
                     cl00082"
                     /db_xref="CDD:469606"
     Region          1267..1774
                     /region_name="RNAP_I_Rpa1_C"
                     /note="Largest subunit (Rpa1) of Eukaryotic RNA polymerase
                     I (RNAP I), C-terminal domain; cd02735"
                     /db_xref="CDD:132722"
     Site            order(1269..1270,1274,1277,1768,1771..1774)
                     /site_type="other"
                     /note="Rpb1 (Rpa1) - Rpb6 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132722"
     Site            order(1276..1323,1662..1719,1721..1725)
                     /site_type="active"
                     /note="cleft [active]"
                     /db_xref="CDD:132722"
     Site            order(1278,1281,1740,1750..1752,1758..1759,1761,1763,1768)
                     /site_type="other"
                     /note="Rpb1 (Rpa1) - Rpb2 (Rpa2) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:132722"
     Site            order(1323,1717,1733..1734,1737)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:132722"
     Site            order(1655..1656,1658,1668..1674,1676,1696,1707..1708,
                     1710)
                     /site_type="other"
                     /note="Rpb1 (Rpa1) - Rpb5 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132722"
     Site            1725..1766
                     /site_type="active"
                     /note="clamp [active]"
                     /db_xref="CDD:132722"
     CDS             1..1778
                     /gene="POLR1A"
                     /coded_by="XM_041481745.1:86..5422"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 5 bases at 5
                     genomic stop codons"
                     /db_xref="GeneID:121361219"
ORIGIN      
        1 mpprraglwe ggrhhsssgg dagtaslrrw yrpapppprc pdrvvlpvar rfqresgsrc
       61 rpgkncsfam rppkvvpwrr lvgvsfgmyt aeeirklsvk pitnpqyldn vgnpavngly
      121 dlalgppdsr evcatcmqnf sncpghfghi elplpvynpl ffdklyllir gsclnchmlt
      181 cpravvhlll sqlkvlqkgl lhavhdleiv lnrfveqcad atgseieeel nrhvqemlqs
      241 sqirdrcsnv knvcecrnkl isqfwkahma skkcpncksr rslvrkehns kltvtypstv
      301 yhksgeegil detagidesq lgkrgyltpm takeyilalw knegfflryl fpgmdpndss
      361 gfspdmffld llvvppsryr pvnrlgdrlf tngqtvnlqa vmkdaqlirk llvfmakeqc
      421 qpikfteeiq tetgedsepl drsvlttipg qsiadklyna wirlqshvni vfdsdmdkli
      481 tekypgirql lekkeglfrk hmmgkrvdfa arsvicpdmy igtneigipm vfatkltypq
      541 pvtpwnvkel rqavingpkv hpgasmvine dgsrtvlsat sltqreaiak qlltpssgap
      601 qtglkivcrh irngdvllln rqptlhrpsi qahrarilpg ekvlrlhyan ckaynadfdg
      661 demnahfpqs elgraeaytl aitdkqylvp kasrtareiy fxmhleitfv yfvsxxmgff
      721 fxgclltsev yflllsrgmi iqkkkiipap hpaslxvvst lliniipdnh aplnltgkak
      781 iggrawvkgp akgclnldsm cesqviikdg ellcgvldka hfgssayglv hccyeiygge
      841 tsgkvltclg rlftaylqly rgftmgiedi lvkreadhkr kkiiersrqs gieavraaln
      901 lpetasceev qgkwqdahlc kdqrdfnmvd mkfkeevnny nnevnkvcmp lglhrsfpen
      961 nlqlmvqsga kgstvntmqi scllgqiele grrpplmasg kslpcfqpyd fspssggfvt
     1021 grfltgirps efffhcmagr eglvdtavkt srsgylqrci ikhleglvvq ydltvrdsdg
     1081 svvqflyged gldipktqfl qpeqfpfiae nyeviqktnh ldealarmes hqanqqfkai
     1141 kkwrarhqns vqreggfllf sqkklaslka qlpggeikng rdpatlqllk mwyeldekkq
     1201 rkylkktnkc pdpslgvwrp dtyfasvset fekgvegyin kwesensrsy mhpalssdrl
     1261 kdllylkwqr slcdpgeavg llaaqsigep stqmtlntfh fagrgemnvt lgiprlreil
     1321 mvassniktp mmsvpvlntk kalkkvkqlk klltrvclae vlekvdiees lhvkhklnkh
     1381 rlykikfhfl phecyreekc vkprqilhfm etrffkvlle aikrkttkma sfnevstrkt
     1441 trkdldddqd ktvnsleava edeenivdae adegdgdate tkrrknqeee vdyeseeeng
     1501 eenvnenped eeaesekeeg tpgaeedqnr aegedsqhls ivsqtkkgkd rllqsaevrv
     1561 savveshpsi qdytfdtene lwcevslalp ltkvyfdlss llaslarstv ihevkgitrc
     1621 llnestskeg ekesvlqteg inlaelfkys dildlnrlyc ndihamakny giesalrvii
     1681 keikdvfavy givvdprhls lvadymcfeg iykplnrigi qsnssplqqm tfetsykflk
     1741 datimgahde lrspsaclvv gkvvkggtgl fdlkqpla
//
LOCUS       XP_041337796            1419 aa            linear   VRT 06-MAY-2021
DEFINITION  capping protein inhibiting regulator of actin dynamics [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337796
VERSION     XP_041337796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1419
                     /product="capping protein inhibiting regulator of actin
                     dynamics"
                     /calculated_mol_wt=163164
     Region          45..173
                     /region_name="DUF4592"
                     /note="Domain of unknown function (DUF4592); pfam15262"
                     /db_xref="CDD:464602"
     Region          <229..718
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1419
                     /gene="CRACD"
                     /coded_by="XM_041481862.1:217..4476"
                     /db_xref="GeneID:121361283"
ORIGIN      
        1 mgsrafshds ifipdgrtes eqaiqamsqe nvlgkvkilq qqlaknikfg qppqmtisar
       61 tmgeanasae ddallsspme tetqqdtais dcsnkstdtp dflrkmnflg tghemeekvt
      121 pmksarpkrq fscsgtieti nldsvpqala rldnsaakhk lsvkpkkqrm srqhkrltkg
      181 sqsltitefe pedletqlye diypgyngrf tadklihdrd eqkqlqltkq kriedhwgil
      241 eaerirqive meeqreteek rcqeleemrk eqekrrceee rrqylldeek lkieeqtchk
      301 derklvkaek rqeleeqmqk eleeqhrqnl eekrhwevee qqrreleeqk lkeqeeqrqe
      361 levkklkeqe eqrqelevqk lkeqeeqqrr eleeqklkeq eehqrqeveq hqqreeqqrl
      421 kqeeeknqdq keqqrrelee qkhqeqaeqr hqelevekhq ereeqkhkdl eekqrqelee
      481 qkrlalkelk qhrtekdsrk eeernwleeq telkkenkee tqqqeleekd leeveiklkq
      541 ekepeslkqe keqeeqrqhl kekvktekeq pqqvtdkkkk reeqrkhklt kqmhmessdc
      601 vlqdelkqqk eqnghewnkl keqkvdtegq nlqpkqeksl eqpqekdqlc saggaarhpa
      661 eerlqegssf qkvkqpekgt ktaeeilaqk lkkeveaqeq krigeelrwq evderqmasr
      721 pftfqvssgd kqiifqkvnl spvmpikgag lsspsvkdck vhttskgshs lpssvcvpht
      781 ailvtgaqlc gtavnlnqik dtacksllgl teerknvdip spekserkkq dpkpssskmk
      841 haqealnnqa vlaewasirs rilknaennk ynerdrvtac rhsddwtprg rgaphgnlrk
      901 tlsanakfsi tpawqkfsdv skansdaenv nvakgnetva vgrttgssad skedvvptfk
      961 dnlaekpkek meshsevtdn tegckfakdl psflvpsfph smgkelpqpe lpnalenqqs
     1021 nstkkadkpp pngeenvspf giklrrtnys lrfhydqqae qkkkkrysag dsfdgvpdpl
     1081 tstegekess vftsqestsp gtgranipgn lkdssvtvve fstpvgtpvv ppatgqsalp
     1141 ahekpacksl vpqkpalapk ptsqtppssp lskmnrsnls emlgqrvaka esdggwrked
     1201 ranaaqptps ndykneeeei kekksffpsl sipwrekndk kpeplkkekp vlqsrhsvdg
     1261 skllekvets qplwitlalq kqkgfreqqa treerrqare akqaeklake naavsnqsdn
     1321 kssssktstl qksttqegek kietavsrle rrehlkksnt lptsvtveis dsvpstpvtk
     1381 evakrfstpd anpvstepaw lalakrkaka wsdcpqiik
//
LOCUS       XP_041337931            1184 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-alanine-activating enzyme isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337931
VERSION     XP_041337931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481997.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1184
                     /product="beta-alanine-activating enzyme isoform X1"
                     /calculated_mol_wt=131105
     Region          74..600
                     /region_name="A_NRPS_acs4"
                     /note="acyl-CoA synthetase family member 4; cd17654"
                     /db_xref="CDD:341309"
     Site            order(262,265..270,272..273)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341309"
     Site            order(265..266,386..387,409..414,442,495,506,509,594)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341309"
     Region          625..689
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          837..871
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <839..1017
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     Region          898..933
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          940..983
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          949..>1175
                     /region_name="PQQ_DH_like"
                     /note="PQQ-dependent dehydrogenases and related proteins;
                     cl11493"
                     /db_xref="CDD:472205"
     Region          991..1017
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1184
                     /gene="AASDH"
                     /coded_by="XM_041481997.1:185..3739"
                     /db_xref="GeneID:121361346"
ORIGIN      
        1 mraryyrtpa nrrrrrwrag agpgghpevp rtgvtrsags rrfvsvpvlv svpcgnggaa
       61 mlqalvaraa geqprrpavc fdacrgeppa sysyatvlel aaeltaflqk hcdrrgrcei
      121 glycypginl pswilgilqv paayspidpd appaistyfm kkinlqyilv endkinkfqm
      181 shagcfyhns saiehigltl fqmsssntdf ssevdnmksk cepfkavgns qpeytlcpdq
      241 tkvksseagy mdadqkdtla yvlhtsgttg ipkivrvphk civpniqhlk sifeitqddv
      301 lflaspltfd psvvelfmal tsgasilvvp ntikmmpvel saalfhhhhv tvlqatptll
      361 rrfgahiiks rvlsantslr vlalggeafp vlsllkswkh kenktsifnl ygitevsswa
      421 tcykipeevf sadfrtdfpi plgspllgtk levrdadgsa vlegegqifi ggeericfld
      481 devavpqgtm ratgdfvrvk naelfflgrk dnqikrhskr fnieylqqva edlcqveaca
      541 vtwyqeqkli lfvlpknnfe eretfkelqk rlpayavpde ivvikalplt shgkvdicel
      601 nkiyqnhlns rrrdsklsda eelwerlqyl wksvlglpcd stgiskdavf lysggdslka
      661 lrfheeieml vgkavpglle iilshsieei yrhilkmlfp deeqlmnpdn vvkrklrgnn
      721 geefhgkyik ltsergleia sglipfvaln rgnnffsmnf tkssmqpknt vqvgveplqq
      781 psslhskipg vmkshvqgse lknriltlen kanendhssv qhihaecshs svaelalcvr
      841 wksntrkcvd asplviipak egvsasvyig shshamqaid ldlgeikwek tlgdriessa
      901 cvskcgnfiv vgcydglvyv lqssdgevhw tfvtedtvks savvdpssgl vyigshdqhv
      961 yaldiykkvc iwklhcegga vfsspclssf phhlyvatlg glllavnpvt gskiwksnlg
     1021 kplfssphcn enyvyvgcvd gnlycythsg ekvwqfstng pvfsspclss ltkqeiffgs
     1081 hdcfiyccnm egnllwkfea tssvygtpfi fqsddlnnki llaavstdgk vwilnaksgt
     1141 aegvdklpge vfsspvvwgt klvvgcrndy vycldlyiag ksns
//
LOCUS       XP_041338018            1124 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-alanine-activating enzyme isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338018
VERSION     XP_041338018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1124
                     /product="beta-alanine-activating enzyme isoform X2"
                     /calculated_mol_wt=124634
     Region          14..540
                     /region_name="A_NRPS_acs4"
                     /note="acyl-CoA synthetase family member 4; cd17654"
                     /db_xref="CDD:341309"
     Site            order(202,205..210,212..213)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341309"
     Site            order(205..206,326..327,349..354,382,435,446,449,534)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341309"
     Region          565..629
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          777..811
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <779..957
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     Region          838..873
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          880..923
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          889..>1115
                     /region_name="PQQ_DH_like"
                     /note="PQQ-dependent dehydrogenases and related proteins;
                     cl11493"
                     /db_xref="CDD:472205"
     Region          931..957
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1124
                     /gene="AASDH"
                     /coded_by="XM_041482084.1:97..3471"
                     /db_xref="GeneID:121361346"
ORIGIN      
        1 mlqalvaraa geqprrpavc fdacrgeppa sysyatvlel aaeltaflqk hcdrrgrcei
       61 glycypginl pswilgilqv paayspidpd appaistyfm kkinlqyilv endkinkfqm
      121 shagcfyhns saiehigltl fqmsssntdf ssevdnmksk cepfkavgns qpeytlcpdq
      181 tkvksseagy mdadqkdtla yvlhtsgttg ipkivrvphk civpniqhlk sifeitqddv
      241 lflaspltfd psvvelfmal tsgasilvvp ntikmmpvel saalfhhhhv tvlqatptll
      301 rrfgahiiks rvlsantslr vlalggeafp vlsllkswkh kenktsifnl ygitevsswa
      361 tcykipeevf sadfrtdfpi plgspllgtk levrdadgsa vlegegqifi ggeericfld
      421 devavpqgtm ratgdfvrvk naelfflgrk dnqikrhskr fnieylqqva edlcqveaca
      481 vtwyqeqkli lfvlpknnfe eretfkelqk rlpayavpde ivvikalplt shgkvdicel
      541 nkiyqnhlns rrrdsklsda eelwerlqyl wksvlglpcd stgiskdavf lysggdslka
      601 lrfheeieml vgkavpglle iilshsieei yrhilkmlfp deeqlmnpdn vvkrklrgnn
      661 geefhgkyik ltsergleia sglipfvaln rgnnffsmnf tkssmqpknt vqvgveplqq
      721 psslhskipg vmkshvqgse lknriltlen kanendhssv qhihaecshs svaelalcvr
      781 wksntrkcvd asplviipak egvsasvyig shshamqaid ldlgeikwek tlgdriessa
      841 cvskcgnfiv vgcydglvyv lqssdgevhw tfvtedtvks savvdpssgl vyigshdqhv
      901 yaldiykkvc iwklhcegga vfsspclssf phhlyvatlg glllavnpvt gskiwksnlg
      961 kplfssphcn enyvyvgcvd gnlycythsg ekvwqfstng pvfsspclss ltkqeiffgs
     1021 hdcfiyccnm egnllwkfea tssvygtpfi fqsddlnnki llaavstdgk vwilnaksgt
     1081 aegvdklpge vfsspvvwgt klvvgcrndy vycldlyiag ksns
//
LOCUS       XP_041338107            1124 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-alanine-activating enzyme isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338107
VERSION     XP_041338107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1124
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1124
                     /product="beta-alanine-activating enzyme isoform X2"
                     /calculated_mol_wt=124634
     Region          14..540
                     /region_name="A_NRPS_acs4"
                     /note="acyl-CoA synthetase family member 4; cd17654"
                     /db_xref="CDD:341309"
     Site            order(202,205..210,212..213)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341309"
     Site            order(205..206,326..327,349..354,382,435,446,449,534)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341309"
     Region          565..629
                     /region_name="PP-binding"
                     /note="Phosphopantetheine attachment site; pfam00550"
                     /db_xref="CDD:425746"
     Region          777..811
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <779..957
                     /region_name="PQQ_2"
                     /note="PQQ-like domain; pfam13360"
                     /db_xref="CDD:433144"
     Region          838..873
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          880..923
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          889..>1115
                     /region_name="PQQ_DH_like"
                     /note="PQQ-dependent dehydrogenases and related proteins;
                     cl11493"
                     /db_xref="CDD:472205"
     Region          931..957
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1124
                     /gene="AASDH"
                     /coded_by="XM_041482173.1:70..3444"
                     /db_xref="GeneID:121361346"
ORIGIN      
        1 mlqalvaraa geqprrpavc fdacrgeppa sysyatvlel aaeltaflqk hcdrrgrcei
       61 glycypginl pswilgilqv paayspidpd appaistyfm kkinlqyilv endkinkfqm
      121 shagcfyhns saiehigltl fqmsssntdf ssevdnmksk cepfkavgns qpeytlcpdq
      181 tkvksseagy mdadqkdtla yvlhtsgttg ipkivrvphk civpniqhlk sifeitqddv
      241 lflaspltfd psvvelfmal tsgasilvvp ntikmmpvel saalfhhhhv tvlqatptll
      301 rrfgahiiks rvlsantslr vlalggeafp vlsllkswkh kenktsifnl ygitevsswa
      361 tcykipeevf sadfrtdfpi plgspllgtk levrdadgsa vlegegqifi ggeericfld
      421 devavpqgtm ratgdfvrvk naelfflgrk dnqikrhskr fnieylqqva edlcqveaca
      481 vtwyqeqkli lfvlpknnfe eretfkelqk rlpayavpde ivvikalplt shgkvdicel
      541 nkiyqnhlns rrrdsklsda eelwerlqyl wksvlglpcd stgiskdavf lysggdslka
      601 lrfheeieml vgkavpglle iilshsieei yrhilkmlfp deeqlmnpdn vvkrklrgnn
      661 geefhgkyik ltsergleia sglipfvaln rgnnffsmnf tkssmqpknt vqvgveplqq
      721 psslhskipg vmkshvqgse lknriltlen kanendhssv qhihaecshs svaelalcvr
      781 wksntrkcvd asplviipak egvsasvyig shshamqaid ldlgeikwek tlgdriessa
      841 cvskcgnfiv vgcydglvyv lqssdgevhw tfvtedtvks savvdpssgl vyigshdqhv
      901 yaldiykkvc iwklhcegga vfsspclssf phhlyvatlg glllavnpvt gskiwksnlg
      961 kplfssphcn enyvyvgcvd gnlycythsg ekvwqfstng pvfsspclss ltkqeiffgs
     1021 hdcfiyccnm egnllwkfea tssvygtpfi fqsddlnnki llaavstdgk vwilnaksgt
     1081 aegvdklpge vfsspvvwgt klvvgcrndy vycldlyiag ksns
//
LOCUS       XP_041338225             294 aa            linear   VRT 06-MAY-2021
DEFINITION  paired mesoderm homeobox protein 2B [Pyrgilauda ruficollis].
ACCESSION   XP_041338225
VERSION     XP_041338225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="paired mesoderm homeobox protein 2B"
                     /calculated_mol_wt=29965
     Region          99..155
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..294
                     /gene="PHOX2B"
                     /coded_by="XM_041482291.1:7..891"
                     /db_xref="GeneID:121361502"
ORIGIN      
        1 mykmeysyln ssayescmag mdtsslasay adfsscsqas gfqynpirtt fgatsgcpsl
       61 tpgscslgsl rdhqsspyaa vpyklftdhg glnekrkqrr irttftsaql kelervfaet
      121 hypdiytree lalkidltea rvqvwfqnrr akfrkqeraa aaaaaaakng aagkksdasr
      181 ddeskeakst dpdstggpgp npnpapscgg gggggpspaa gqgaagpggp ggepgkgsag
      241 pgglaaagpg qgwapgpgpi tsipdslggp fasvlsslqr pggtkgslvk sgmf
//
LOCUS       XP_041338352             243 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell surface glycoprotein CD8 beta chain isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338352
VERSION     XP_041338352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482418.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..243
                     /product="T-cell surface glycoprotein CD8 beta chain
                     isoform X1"
                     /calculated_mol_wt=27288
     Region          23..133
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          38..42
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          50..54
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          97..101
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          111..116
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          125..128
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..243
                     /gene="CD8B"
                     /coded_by="XM_041482418.1:472..1203"
                     /db_xref="GeneID:121361566"
ORIGIN      
        1 marpwlhlci clqipgfytt llltqtperi ltqtnnktei lcelkkehtg vywyrwsqqk
       61 qhfefllfsn tlskatygpn vrqdkfsvhe arsqssyslh ishlqpldsg tyycsisqss
      121 qlllgsgtql tvvdalppkt tqtpvskkpv prttkskaas regpcsplvw iplaagvlll
      181 llslvpttyr lyrefpasil rgarpwgspr gdgepgegpg lmdtvsclfp glrrrlwlri
      241 hrq
//
LOCUS       XP_041338437             205 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell surface glycoprotein CD8 beta chain isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338437
VERSION     XP_041338437.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482503.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="T-cell surface glycoprotein CD8 beta chain
                     isoform X2"
                     /calculated_mol_wt=23391
     Region          23..133
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          38..42
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          50..54
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          97..101
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          111..116
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          125..128
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..205
                     /gene="CD8B"
                     /coded_by="XM_041482503.1:472..1089"
                     /db_xref="GeneID:121361566"
ORIGIN      
        1 marpwlhlci clqipgfytt llltqtperi ltqtnnktei lcelkkehtg vywyrwsqqk
       61 qhfefllfsn tlskatygpn vrqdkfsvhe arsqssyslh ishlqpldsg tyycsisqss
      121 qlllgsgtql tvvdalppkt tqtpvskkpv prttkskaas regpcsplvw iplaagvlll
      181 llslvpttyr lyrlrrrlwl rihrq
//
LOCUS       XP_041338570             464 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit gamma-1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338570
VERSION     XP_041338570.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482636.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="gamma-aminobutyric acid receptor subunit
                     gamma-1"
                     /calculated_mol_wt=53239
     Region          63..461
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          84..265
                     /region_name="LGIC_ECD_GABAAR_G"
                     /note="extracellular domain of gamma-aminobutyric acid
                     receptor subunit gamma; cd19000"
                     /db_xref="CDD:349801"
     Site            order(91,110)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349801"
     Site            order(94,96..97,102..103,110,112..113,130,132..133,
                     142..147,150,152,154..155,161..163,165,175..177,205,265)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349801"
     Region          184..198
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349801"
     CDS             1..464
                     /gene="GABRG1"
                     /coded_by="XM_041482636.1:1..1395"
                     /db_xref="GeneID:121361664"
ORIGIN      
        1 mdawggpapr wigrrgarll lllltvrlgs gadkaddedd edlmvnktwv lapkihggdv
       61 thildsllqg ydnklrpdig vrttvietdv yvnsigpvdp inmeytidii faqtwydsrl
      121 kfnssmkvlm lnsnmvgkiw ipdtffrnsr ksdahwittp nrllriwsdg rvlytlrlti
      181 naecylqlhn fpmdehscpl efssygyprn eieykwkkts vevadpkywr lyqfafvglr
      241 ntteishtls gdyiimtiff dlsrrmgyft iqtyipcilt vvlswvsfwi nkdavparts
      301 lgittvltmt tlstiarksl pkvsyvtamd lfvsvcfifv faalmeygtl hyftsnrkgv
      361 kgkekkaksk pskppaiavr pgstlipmnn ihhlperddd ygyeclegkd casffccfed
      421 crtgswregr ihiriakids ysriffptaf alfnlvywig ylyl
//
LOCUS       XP_041338694             343 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor suppressor candidate 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041338694
VERSION     XP_041338694.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482760.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="tumor suppressor candidate 3"
                     /calculated_mol_wt=38268
     Region          50..338
                     /region_name="OST3_OST6"
                     /note="OST3 / OST6 family, transporter family; pfam04756"
                     /db_xref="CDD:461420"
     CDS             1..343
                     /gene="TUSC3"
                     /coded_by="XM_041482760.1:17..1048"
                     /db_xref="GeneID:121361733"
ORIGIN      
        1 malgagaagr lphlpaagcl plllllllll cgqlgggqkk kenllaekve qlmewssrrs
       61 virmngdkfr rfvkapprny svivmftalq pqrqcsvcrq aneeyqvlan swryssafsn
      121 klfftivdyd egadvfqqln mnsaptfmhf ppkgkpkrad tfdlqrigfa aeqlakwiad
      181 rtdvhirvfr ppnysgtial allvslvggl lylrrnnlef iynktgwama alcvvfamts
      241 gqmwnhirgp pyahknpqng qvsyihgssq aqfvaeshii lllnaaitmg mvllneaats
      301 kgdvgkrrii clvglglvvf ffsfllsifr skyhgypysf lik
//
LOCUS       XP_041338817             491 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SMYD1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338817
VERSION     XP_041338817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="histone-lysine N-methyltransferase SMYD1 isoform
                     X1"
                     /calculated_mol_wt=55934
     Region          7..281
                     /region_name="SET_SMYD1"
                     /note="SET domain (including post-SET domain) found in SET
                     and MYND domain-containing protein 1 (SMYD1) and similar
                     proteins; cd10526"
                     /db_xref="CDD:380924"
     Site            order(17..19,135,179..183,202..206,250,252,270,272)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380924"
     Site            order(17,19,133,135,180,202..206,252,270,272)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380924"
     Region          52..90
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Site            order(103,177,179..183,192,202,251..252,254,270)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380924"
     Site            order(208,274,276,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     Site            order(208,274,276,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     Region          <321..435
                     /region_name="FxSxx_TPR"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     NF040586"
                     /db_xref="CDD:468560"
     CDS             1..491
                     /gene="SMYD1"
                     /coded_by="XM_041482883.1:281..1756"
                     /db_xref="GeneID:121361806"
ORIGIN      
        1 mtrggmesve lfttegkgrg lkaqkeflpg dvifaepaya avvfdslthv ichtcfkrqe
       61 rlhrcgqckf ahycdrtcqr aawlnhknec saikrhgkap tenirlaari lwkmeregsg
      121 lsegclvaie elqnhvdsfg eeekkelrad vesflefwpp hcqqfgmqli shifgviscn
      181 gftlsdqrgl qavgvgifpn lcqanhdcwp nctvvfnngn heavrsmfht qmrielraln
      241 kispgdeltv syvdflslse errkqlkkqy yfdctcehck kqlkddlmla vkageskpsa
      301 dtvkeviqls kdtlekinka rmeghyhevv klcrdclkkq epvlgdtniy llrilsiase
      361 vlsylqmfee aadyakrmvd gylkiyhpnn aqlgmavmra gvthwhagli eaghglicka
      421 yaillithgp shpitkdlev mrvqtemelr mfqqnefmyy kmreaalknq kiqvmpepsn
      481 enapslfhkk e
//
LOCUS       XP_041338886             478 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SMYD1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338886
VERSION     XP_041338886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..478
                     /product="histone-lysine N-methyltransferase SMYD1 isoform
                     X2"
                     /calculated_mol_wt=54336
     Region          7..268
                     /region_name="SET_SMYD1"
                     /note="SET domain (including post-SET domain) found in SET
                     and MYND domain-containing protein 1 (SMYD1) and similar
                     proteins; cd10526"
                     /db_xref="CDD:380924"
     Site            order(17..19,135,179..183,202..206,237,239,257,259)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380924"
     Site            order(17,19,133,135,180,202..206,239,257,259)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380924"
     Region          52..90
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Site            order(103,177,179..183,192,202,238..239,241,257)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380924"
     Site            order(208,261,263,266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     Site            order(208,261,263,266)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380924"
     Region          <308..422
                     /region_name="FxSxx_TPR"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     NF040586"
                     /db_xref="CDD:468560"
     CDS             1..478
                     /gene="SMYD1"
                     /coded_by="XM_041482952.1:280..1716"
                     /db_xref="GeneID:121361806"
ORIGIN      
        1 mtrggmesve lfttegkgrg lkaqkeflpg dvifaepaya avvfdslthv ichtcfkrqe
       61 rlhrcgqckf ahycdrtcqr aawlnhknec saikrhgkap tenirlaari lwkmeregsg
      121 lsegclvaie elqnhvdsfg eeekkelrad vesflefwpp hcqqfgmqli shifgviscn
      181 gftlsdqrgl qavgvgifpn lcqanhdcwp nctvvfnngk ielralnkis pgdeltvsyv
      241 dflslseerr kqlkkqyyfd ctcehckkql kddlmlavka geskpsadtv keviqlskdt
      301 lekinkarme ghyhevvklc rdclkkqepv lgdtniyllr ilsiasevls ylqmfeeaad
      361 yakrmvdgyl kiyhpnnaql gmavmragvt hwhaglieag hglickayai llithgpshp
      421 itkdlevmrv qtemelrmfq qnefmyykmr eaalknqkiq vmpepsnena pslfhkke
//
LOCUS       XP_041339013             438 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit beta-1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339013
VERSION     XP_041339013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..438
                     /product="gamma-aminobutyric acid receptor subunit beta-1
                     isoform X1"
                     /calculated_mol_wt=50521
     Region          6..436
                     /region_name="LIC"
                     /note="Cation transporter family protein; TIGR00860"
                     /db_xref="CDD:273305"
     CDS             1..438
                     /gene="GABRB1"
                     /coded_by="XM_041483079.1:19..1335"
                     /db_xref="GeneID:121361936"
ORIGIN      
        1 msyvketvdr llqgydirlr pdfggppvdv gmrieiasid vvsevnmdyt ltmyfqqswr
       61 dkrlsysgip lnltldnrva dqlwvpdtyf qndkksfvhg vtvknrmirl hpdgtvlygl
      121 ritttaacmm dlrrypldeq nctleiesyg yttddiefyw nggeaavtgv nnielpqfsi
      181 vdykmvskrv efttgayprl slsfrlkrni gyfilqtymp stlitilswv sfwinydasa
      241 arvalgittv ltmttisthl retlpkipyv kaidiylmgc fvfvflalle yafvnyiffg
      301 kgpqrqkkta gragratgek grletnrvqv dahgnvlepr elqnnicrif hdppattyvc
      361 nsanlqyrra assrdlysrs aldrhrlhkk ghlrrrasqi kvkipdltdv nlidkwsrmv
      421 fpimfilfnv vywlyyvh
//
LOCUS       XP_041339098             436 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit beta-1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339098
VERSION     XP_041339098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="gamma-aminobutyric acid receptor subunit beta-1
                     isoform X2"
                     /calculated_mol_wt=50293
     Region          6..434
                     /region_name="LIC"
                     /note="Cation transporter family protein; TIGR00860"
                     /db_xref="CDD:273305"
     CDS             1..436
                     /gene="GABRB1"
                     /coded_by="XM_041483164.1:19..1329"
                     /db_xref="GeneID:121361936"
ORIGIN      
        1 msyvketvdr llqgydirlr pdfggppvdv gmrieiasid vvsevnmdyt ltmyfqqswr
       61 dkrlsysgip lnltldnrva dqlwvpdtyf qndkksfvhg vtvknrmirl hpdgtvlygl
      121 ritttaacmm dlrrypldeq nctleiesyg yttddiefyw nggeaavtgv nnielpqfsi
      181 vdykmvskrv efttgayprl slsfrlkrni gyfilqtymp stlitilswv sfwinydasa
      241 arvalgittv ltmttisthl retlpkipyv kaidiylmgc fvfvflalle yafvnyiffg
      301 kgpqrqkkta gragratgek grletnrvda hgnvleprel qnnicrifhd ppattyvcns
      361 anlqyrraas srdlysrsal drhrlhkkgh lrrrasqikv kipdltdvnl idkwsrmvfp
      421 imfilfnvvy wlyyvh
//
LOCUS       XP_041339220            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  condensin complex subunit 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339220
VERSION     XP_041339220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="condensin complex subunit 3"
                     /calculated_mol_wt=116816
     Region          5..>773
                     /region_name="YCG1"
                     /note="Chromosome condensation complex Condensin, subunit
                     G [Chromatin structure and dynamics / Cell division and
                     chromosome partitioning]; COG5218"
                     /db_xref="CDD:227543"
     Region          101..133
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          210..236
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          561..859
                     /region_name="Cnd3"
                     /note="Nuclear condensing complex subunits, C-term domain;
                     pfam12719"
                     /db_xref="CDD:463678"
     CDS             1..1032
                     /gene="NCAPG"
                     /coded_by="XM_041483286.1:19..3117"
                     /db_xref="GeneID:121362050"
ORIGIN      
        1 mgakkkllqv qeafqlaqkp hqnhaklvva lkstyaqldd kegfnekfih flkyamiiyr
       61 repavervin faarfvtsfc qmekedgsee geednlllny vfkflleshn anshavrfrt
      121 cqlvnkilgn mpenaeiddd lfdkingaml irlkdkfpsv rvqavlalsr lqdpkdedcp
      181 vvniystlle ndsnsdvrra vlsciapser tlpiivgrtm dvkeavrkla yevlaekvhm
      241 raltiaqrvk llqqglndrs davkevmkkk llqawlqfte gdvlellhrl dvencpevai
      301 pvlnamfsls plhdivqnck ivdsrklipl edltaenvly wrclceylks kgeegevlle
      361 qvlpepaiya dyllsylqnm pilseeqked fncfenlmtk efigqqliln igcmdtmeeg
      421 grkhllvilq kililpstsa alipllverl lsivndedrr iqiiaeiise vrepivaidq
      481 pidaaeirkr elklaeikvk lfeakqalee citlqdfnra svlkekitel ehtknelikt
      541 aeqaeikeir vekndpetll kclmmcyevl kimslskgis ptineiiqsl ilpgvtnvhp
      601 avrnmavlcl gcctlqnkef aqqqlplllq vlqidnikik lsalkaifdq lmlfgiepfk
      661 trrgndsqsd sahirtenge desetieeee esatvhsllk llsgfldsey selrteaaeg
      721 iaklmfsrrl isakllsrlv llwynpvtee dtrlrhclgv ffplfayanr snqecfeeay
      781 lptlqtllna patsplaevd isnvsellvd ltrpsglkcq skksqdyqel tvhdtlamki
      841 cneiladpta pdvriyakal nslelsssst enllvlldei qekvedkpcq raiekiqakl
      901 tnpnvvknhc grteetglse rtqerditss entvhneeen nkdalhtpvn tetaklrstr
      961 sktgkgqrka aevksvsrrk tgasvkrgle scdripepvp vsssrpqrra ktlalektrm
     1021 nlsrllneet de
//
LOCUS       XP_041339338            1275 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339338
VERSION     XP_041339338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483404.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1275
                     /product="protocadherin-7 isoform X1"
                     /calculated_mol_wt=138975
     Region          39..142
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(43..44,95,97,138,140..141)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          150..291
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(157..158,254,256,287,289..290)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          299..398
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(306..307,361,363,394,396..397)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          416..519
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(421..422,482,484,515,517..518)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          527..629
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(534..535,592,594,625,627..628)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          637..737
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(644..645,700,702,733,735..736)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          748..838
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          841..1052
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1275
                     /gene="PCDH7"
                     /coded_by="XM_041483404.1:203..4030"
                     /db_xref="GeneID:121362122"
ORIGIN      
        1 mrkmrtflrf vhcycccfll vlppplwvsl aaakqllkyr laeegpadir ignvasdlgi
       61 vtgsgevtfs lesgsdylki dnmtgelstt erridreklp qcqmifdene cfldfevsvi
      121 gpsqswvdlf egrviildin dntptfpspv ltltveenrp vgtlyllpta tdrdfgrngi
      181 eryellqepg gdggrrgggg gsaaaapesa pfpggskrrq eaeaaarssv felqvadtld
      241 gekqpqlivk galdreqrds yelslrvrdg gdparssqai lrvlitdvnd nsprfeksvy
      301 eadlaenssp gtpilqlrat dldvgvngqi eyvfgaates vrrllrlden sgwlsvlhri
      361 dreevnqlrf tvmardrgqp pktdkatvvl nirdendnvp tidirkigri plrdgvasva
      421 edvlvdtpia lvqvsdrdqg engvvtctvv gdvpfqlkpa segegepqnk rkyflhtsap
      481 ldyeavrdyn vvivavdsgs pslssnnsll vrvgdtndnp pmfsqavlev sfpennlpge
      541 rvatvvatda dsgknaeity sleasplsse apgsifsidp dsgdvsvqav ldreqrdtye
      601 fqvtardkgv pslqgsttvv vrvsdrndne prfmqdvftf yvkenlqpns pvgmvtvmdf
      661 dkgrnaelsl siqpgdheqa agifsiendt gtifstvsfd reqqtsytfk vkavdggepp
      721 rsatatvslf vmdendnapt vtfpsnssyt vlppssnmrt vvatvvatda dtglnadlny
      781 sivggnpfkl feidpasgvv slvgklapkh yglhrlvvqv ndsgqppqst tallhvfvne
      841 slsnatvves qvarslhtpl aqdiagdpsy elskqrlsiv igvvagimtv illilvvvma
      901 rycrskgkhg yeagkkdhed fftpqqhdka kkpkkdkkgk kgkqplyssi vtveaskpng
      961 qrydsvnekl sdspgmgryr svnggpgspd larhyksssp lptvqlhpqs ptagkkhqav
     1021 qdlppantfv gagdnisigs dhcseyscqa sskyskqvdt vqttqhpghi eesckmnpfr
     1081 rvtfsvvsqp qdphqgslqs cydsgleese tpssksssgp rlgalplped nyerttpdgs
     1141 vgeaehmend srplpdvalt gkctrecdey ghsdscwmpv rtsperkqks qpklstfmpv
     1201 dergsqekla ngeaslmgdr nrnllnkklt ssyetfstas fskneegnpe dipltqtgey
     1261 kpspvntltr revyl
//
LOCUS       XP_041339427            1255 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339427
VERSION     XP_041339427.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483493.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1255
                     /product="protocadherin-7 isoform X2"
                     /calculated_mol_wt=136738
     Region          39..142
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(43..44,95,97,138,140..141)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          150..291
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(157..158,254,256,287,289..290)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          299..398
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(306..307,361,363,394,396..397)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          416..519
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(421..422,482,484,515,517..518)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          527..629
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(534..535,592,594,625,627..628)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          637..737
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(644..645,700,702,733,735..736)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          748..838
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          841..1052
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1255
                     /gene="PCDH7"
                     /coded_by="XM_041483493.1:203..3970"
                     /db_xref="GeneID:121362122"
ORIGIN      
        1 mrkmrtflrf vhcycccfll vlppplwvsl aaakqllkyr laeegpadir ignvasdlgi
       61 vtgsgevtfs lesgsdylki dnmtgelstt erridreklp qcqmifdene cfldfevsvi
      121 gpsqswvdlf egrviildin dntptfpspv ltltveenrp vgtlyllpta tdrdfgrngi
      181 eryellqepg gdggrrgggg gsaaaapesa pfpggskrrq eaeaaarssv felqvadtld
      241 gekqpqlivk galdreqrds yelslrvrdg gdparssqai lrvlitdvnd nsprfeksvy
      301 eadlaenssp gtpilqlrat dldvgvngqi eyvfgaates vrrllrlden sgwlsvlhri
      361 dreevnqlrf tvmardrgqp pktdkatvvl nirdendnvp tidirkigri plrdgvasva
      421 edvlvdtpia lvqvsdrdqg engvvtctvv gdvpfqlkpa segegepqnk rkyflhtsap
      481 ldyeavrdyn vvivavdsgs pslssnnsll vrvgdtndnp pmfsqavlev sfpennlpge
      541 rvatvvatda dsgknaeity sleasplsse apgsifsidp dsgdvsvqav ldreqrdtye
      601 fqvtardkgv pslqgsttvv vrvsdrndne prfmqdvftf yvkenlqpns pvgmvtvmdf
      661 dkgrnaelsl siqpgdheqa agifsiendt gtifstvsfd reqqtsytfk vkavdggepp
      721 rsatatvslf vmdendnapt vtfpsnssyt vlppssnmrt vvatvvatda dtglnadlny
      781 sivggnpfkl feidpasgvv slvgklapkh yglhrlvvqv ndsgqppqst tallhvfvne
      841 slsnatvves qvarslhtpl aqdiagdpsy elskqrlsiv igvvagimtv illilvvvma
      901 rycrskgkhg yeagkkdhed fftpqqhdka kkpkkdkkgk kgkqplyssi vtveaskpng
      961 qrydsvnekl sdspgmgryr svnggpgspd larhyksssp lptvqlhpqs ptagkkhqav
     1021 qdlppantfv gagdnisigs dhcseyscqa sskyskqpfr rvtfsvvsqp qdphqgslqs
     1081 cydsgleese tpssksssgp rlgalplped nyerttpdgs vgeaehmend srplpdvalt
     1141 gkctrecdey ghsdscwmpv rtsperkqks qpklstfmpv dergsqekla ngeaslmgdr
     1201 nrnllnkklt ssyetfstas fskneegnpe dipltqtgey kpspvntltr revyl
//
LOCUS       XP_041339507            1247 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-7 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339507
VERSION     XP_041339507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1247
                     /product="protocadherin-7 isoform X3"
                     /calculated_mol_wt=135840
     Region          39..142
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(43..44,95,97,138,140..141)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          150..291
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(157..158,254,256,287,289..290)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          299..398
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(306..307,361,363,394,396..397)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          416..519
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(421..422,482,484,515,517..518)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          527..629
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(534..535,592,594,625,627..628)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          637..737
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(644..645,700,702,733,735..736)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          748..838
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          841..1052
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1247
                     /gene="PCDH7"
                     /coded_by="XM_041483573.1:203..3946"
                     /db_xref="GeneID:121362122"
ORIGIN      
        1 mrkmrtflrf vhcycccfll vlppplwvsl aaakqllkyr laeegpadir ignvasdlgi
       61 vtgsgevtfs lesgsdylki dnmtgelstt erridreklp qcqmifdene cfldfevsvi
      121 gpsqswvdlf egrviildin dntptfpspv ltltveenrp vgtlyllpta tdrdfgrngi
      181 eryellqepg gdggrrgggg gsaaaapesa pfpggskrrq eaeaaarssv felqvadtld
      241 gekqpqlivk galdreqrds yelslrvrdg gdparssqai lrvlitdvnd nsprfeksvy
      301 eadlaenssp gtpilqlrat dldvgvngqi eyvfgaates vrrllrlden sgwlsvlhri
      361 dreevnqlrf tvmardrgqp pktdkatvvl nirdendnvp tidirkigri plrdgvasva
      421 edvlvdtpia lvqvsdrdqg engvvtctvv gdvpfqlkpa segegepqnk rkyflhtsap
      481 ldyeavrdyn vvivavdsgs pslssnnsll vrvgdtndnp pmfsqavlev sfpennlpge
      541 rvatvvatda dsgknaeity sleasplsse apgsifsidp dsgdvsvqav ldreqrdtye
      601 fqvtardkgv pslqgsttvv vrvsdrndne prfmqdvftf yvkenlqpns pvgmvtvmdf
      661 dkgrnaelsl siqpgdheqa agifsiendt gtifstvsfd reqqtsytfk vkavdggepp
      721 rsatatvslf vmdendnapt vtfpsnssyt vlppssnmrt vvatvvatda dtglnadlny
      781 sivggnpfkl feidpasgvv slvgklapkh yglhrlvvqv ndsgqppqst tallhvfvne
      841 slsnatvves qvarslhtpl aqdiagdpsy elskqrlsiv igvvagimtv illilvvvma
      901 rycrskgkhg yeagkkdhed fftpqqhdka kkpkkdkkgk kgkqplyssi vtveaskpng
      961 qrydsvnekl sdspgmgryr svnggpgspd larhyksssp lptvqlhpqs ptagkkhqav
     1021 qdlppantfv gagdnisigs dhcseyscqa sskyskqpfr rvtfsvvsqp qdphqgslqs
     1081 cydsgleese tpssksssgp rlgalplped nyerttpdgs vdsrplpdva ltgkctrecd
     1141 eyghsdscwm pvrtsperkq ksqpklstfm pvdergsqek langeaslmg drnrnllnkk
     1201 ltssyetfst asfskneegn pedipltqtg eykpspvntl trrevyl
//
LOCUS       XP_041339587            1219 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-7 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041339587
VERSION     XP_041339587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1219
                     /product="protocadherin-7 isoform X4"
                     /calculated_mol_wt=132926
     Region          39..142
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(43..44,95,97,138,140..141)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          150..291
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(157..158,254,256,287,289..290)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          299..398
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(306..307,361,363,394,396..397)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          416..519
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(421..422,482,484,515,517..518)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          527..629
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(534..535,592,594,625,627..628)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          637..737
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(644..645,700,702,733,735..736)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          748..838
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          841..1052
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1219
                     /gene="PCDH7"
                     /coded_by="XM_041483653.1:203..3862"
                     /db_xref="GeneID:121362122"
ORIGIN      
        1 mrkmrtflrf vhcycccfll vlppplwvsl aaakqllkyr laeegpadir ignvasdlgi
       61 vtgsgevtfs lesgsdylki dnmtgelstt erridreklp qcqmifdene cfldfevsvi
      121 gpsqswvdlf egrviildin dntptfpspv ltltveenrp vgtlyllpta tdrdfgrngi
      181 eryellqepg gdggrrgggg gsaaaapesa pfpggskrrq eaeaaarssv felqvadtld
      241 gekqpqlivk galdreqrds yelslrvrdg gdparssqai lrvlitdvnd nsprfeksvy
      301 eadlaenssp gtpilqlrat dldvgvngqi eyvfgaates vrrllrlden sgwlsvlhri
      361 dreevnqlrf tvmardrgqp pktdkatvvl nirdendnvp tidirkigri plrdgvasva
      421 edvlvdtpia lvqvsdrdqg engvvtctvv gdvpfqlkpa segegepqnk rkyflhtsap
      481 ldyeavrdyn vvivavdsgs pslssnnsll vrvgdtndnp pmfsqavlev sfpennlpge
      541 rvatvvatda dsgknaeity sleasplsse apgsifsidp dsgdvsvqav ldreqrdtye
      601 fqvtardkgv pslqgsttvv vrvsdrndne prfmqdvftf yvkenlqpns pvgmvtvmdf
      661 dkgrnaelsl siqpgdheqa agifsiendt gtifstvsfd reqqtsytfk vkavdggepp
      721 rsatatvslf vmdendnapt vtfpsnssyt vlppssnmrt vvatvvatda dtglnadlny
      781 sivggnpfkl feidpasgvv slvgklapkh yglhrlvvqv ndsgqppqst tallhvfvne
      841 slsnatvves qvarslhtpl aqdiagdpsy elskqrlsiv igvvagimtv illilvvvma
      901 rycrskgkhg yeagkkdhed fftpqqhdka kkpkkdkkgk kgkqplyssi vtveaskpng
      961 qrydsvnekl sdspgmgryr svnggpgspd larhyksssp lptvqlhpqs ptagkkhqav
     1021 qdlppantfv gagdnisigs dhcseyscqa sskyskqpfr rvtfsvvsqp qdphqgslqs
     1081 cydsgleese tpsnsrplpd valtgkctre cdeyghsdsc wmpvrtsper kqksqpklst
     1141 fmpvdergsq eklangeasl mgdrnrnlln kkltssyetf stasfsknee gnpedipltq
     1201 tgeykpspvn tltrrevyl
//
LOCUS       XP_041339669            1227 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-7 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041339669
VERSION     XP_041339669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1227
                     /product="protocadherin-7 isoform X5"
                     /calculated_mol_wt=134442
     Region          39..142
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(43..44,95,97,138,140..141)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          150..260
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(157..158,223,225,256,258..259)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          268..367
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(275..276,330,332,363,365..366)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          385..488
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(390..391,451,453,484,486..487)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          496..598
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(503..504,561,563,594,596..597)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          606..706
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(613..614,669,671,702,704..705)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          717..807
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          810..1024
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1227
                     /gene="PCDH7"
                     /coded_by="XM_041483735.1:203..3886"
                     /db_xref="GeneID:121362122"
ORIGIN      
        1 mrkmrtflrf vhcycccfll vlppplwvsl aaakqllkyr laeegpadir ignvasdlgi
       61 vtgsgevtfs lesgsdylki dnmtgelstt erridreklp qcqmifdene cfldfevsvi
      121 gpsqswvdlf egrviildin dntptfpspv ltltveenrp vgtlyllpta tdrdfgrngi
      181 eryelkrrqe aeaaarssvf elqvadtldg ekqpqlivkg aldreqrdsy elslrvrdgg
      241 dparssqail rvlitdvndn sprfeksvye adlaensspg tpilqlratd ldvgvngqie
      301 yvfgaatesv rrllrldens gwlsvlhrid reevnqlrft vmardrgqpp ktdkatvvln
      361 irdendnvpt idirkigrip lrdgvasvae dvlvdtpial vqvsdrdqge ngvvtctvvg
      421 dvpfqlkpas egegepqnkr kyflhtsapl dyeavrdynv vivavdsgsp slssnnsllv
      481 rvgdtndnpp mfsqavlevs fpennlpger vatvvatdad sgknaeitys leasplssea
      541 pgsifsidpd sgdvsvqavl dreqrdtyef qvtardkgvp slqgsttvvv rvsdrndnep
      601 rfmqdvftfy vkenlqpnsp vgmvtvmdfd kgrnaelsls iqpgdheqaa gifsiendtg
      661 tifstvsfdr eqqtsytfkv kavdggeppr satatvslfv mdendnaptv tfpsnssytv
      721 lppssnmrtv vatvvatdad tglnadlnys ivggnpfklf eidpasgvvs lvgklapkhy
      781 glhrlvvqvn dsgqppqstt allhvfvnes lsnatvvesq varslhtpla qdiagdpsye
      841 lskqrlsivi gvvagimtvi llilvvvmar ycrskgkhgy eagkkdhedf ftpqqhdkak
      901 kpkkdkkgkk gkqplyssiv tveaskpngq rydsvnekls dspgmgryrs vnggpgspdl
      961 arhykssspl ptvqlhpqsp tagkkhqavq dlppantfvg agdnisigsd hcseyscqas
     1021 skkykkqqlp frrvtfsvvs qpqdphqgsl qscydsglee setpssksss gprlgalplp
     1081 ednyerttpd gsvgeaehme ndsrplpdva ltgkctrecd eyghsdscwm pvrtsperkq
     1141 ksqpklstfm pvdergsqek langeaslmg drnrnllnkk ltssyetfst asfskneegn
     1201 pedipltqtg eykpspvntl trrevyl
//
LOCUS       XP_041339797             908 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339797
VERSION     XP_041339797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..908
                     /product="exocyst complex component 1 isoform X1"
                     /calculated_mol_wt=103457
     Region          3..120
                     /region_name="PH-EXOC1"
                     /note="PH-like domain of Exocyst complex component 1;
                     cd14683"
                     /db_xref="CDD:270202"
     Region          190..885
                     /region_name="Sec3_C"
                     /note="Exocyst complex component Sec3; pfam09763"
                     /db_xref="CDD:401638"
     CDS             1..908
                     /gene="EXOC1"
                     /coded_by="XM_041483863.1:256..2982"
                     /db_xref="GeneID:121362374"
ORIGIN      
        1 mtaikhalqr diftpnderl lsivnvckag kkkrncflca tvtterpvqv nvvkvkksdk
       61 gdfykrqtaw alrdlavvda kdavkespef dlhfdkvykw vasstveknt fisciwklnq
      121 rylrkkidfi nvssqlleel pkvaeesvps genqsvaggd eeavdeyqel nareeqdiei
      181 mmegceyaia naeafaekls relqvldgan iqsimasekq vnilmkllde alkevdqiel
      241 klssyeemlq svkeqmdqis esnhlihlsn tnnvkllsei eflvnhmdla kghikalqeg
      301 dltssrgiea ctnaadallq cmnvalrpgh dmlhavkqqq qrfsdlreqf arrlashlns
      361 vfvqqftqtf lqlynrssyh svpvstghdq sstlaqhsae ltlpnhhpfh rdllryaklm
      421 ewlkntdygk yegltknymd ylsrlyerei kdffevakik mtgttregkk fglhgssgkl
      481 tgstsslnkl svqssgnrrs qssslldmgn msasdldvad rtkfdkifeq vlseleplcl
      541 aeqdfiskff klqqhqstsg tamnqveevd gvalsrsyts gvpqtvssek dmirqmmtki
      601 frciepelnn lialgdkids fnslymlvkm shhvwtaqnv dpasflsttl gnvlvtvkrn
      661 fdkcisnqmk qmdevkiskk skvgilpfva efeefaalae sifknaerrg dldkayikli
      721 ravfdsvekv anesqktprd vvmmenfhhi fatlsrlkis cleaekkeak qkytdhlqsy
      781 viyslgqple klnhffegve arvaqgiree evsyqlafnk qelrkvikey pgkevkkgld
      841 nlykkvdkhl ceeenllqvv whsmqdefir qykhfeglia rcypgsgitm eftiqdildy
      901 cssiaqsh
//
LOCUS       XP_041339882             905 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339882
VERSION     XP_041339882.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483948.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..905
                     /product="exocyst complex component 1 isoform X2"
                     /calculated_mol_wt=103170
     Region          3..120
                     /region_name="PH-EXOC1"
                     /note="PH-like domain of Exocyst complex component 1;
                     cd14683"
                     /db_xref="CDD:270202"
     Region          190..882
                     /region_name="Sec3_C"
                     /note="Exocyst complex component Sec3; pfam09763"
                     /db_xref="CDD:401638"
     CDS             1..905
                     /gene="EXOC1"
                     /coded_by="XM_041483948.1:256..2973"
                     /db_xref="GeneID:121362374"
ORIGIN      
        1 mtaikhalqr diftpnderl lsivnvckag kkkrncflca tvtterpvqv nvvkvkksdk
       61 gdfykrqtaw alrdlavvda kdavkespef dlhfdkvykw vasstveknt fisciwklnq
      121 rylrkkidfi nvssqlleel pkvaeesvps genqsvaggd eeavdeyqel nareeqdiei
      181 mmegceyaia naeafaekls relqvldgan iqsimasekq vnilmkllde alkevdqiel
      241 klssyeemlq svkeqmdqis esnhlihlsn tnnvkllsei eflvnhmdla kghikalqeg
      301 dltssrgiea ctnaadallq cmnvalrpgh dmlhavkqqq qrfsdlreqf arrlashlns
      361 vfvqqftqtf lqlynrssyh svpghdqsst laqhsaeltl pnhhpfhrdl lryaklmewl
      421 kntdygkyeg ltknymdyls rlyereikdf fevakikmtg ttregkkfgl hgssgkltgs
      481 tsslnklsvq ssgnrrsqss slldmgnmsa sdldvadrtk fdkifeqvls eleplclaeq
      541 dfiskffklq qhqstsgtam nqveevdgva lsrsytsgvp qtvssekdmi rqmmtkifrc
      601 iepelnnlia lgdkidsfns lymlvkmshh vwtaqnvdpa sflsttlgnv lvtvkrnfdk
      661 cisnqmkqmd evkiskkskv gilpfvaefe efaalaesif knaerrgdld kayiklirav
      721 fdsvekvane sqktprdvvm menfhhifat lsrlkiscle aekkeakqky tdhlqsyviy
      781 slgqplekln hffegvearv aqgireeevs yqlafnkqel rkvikeypgk evkkgldnly
      841 kkvdkhlcee enllqvvwhs mqdefirqyk hfegliarcy pgsgitmeft iqdildycss
      901 iaqsh
//
LOCUS       XP_041339971             901 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339971
VERSION     XP_041339971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..901
                     /product="exocyst complex component 1 isoform X3"
                     /calculated_mol_wt=102690
     Region          3..120
                     /region_name="PH-EXOC1"
                     /note="PH-like domain of Exocyst complex component 1;
                     cd14683"
                     /db_xref="CDD:270202"
     Region          183..878
                     /region_name="Sec3_C"
                     /note="Exocyst complex component Sec3; pfam09763"
                     /db_xref="CDD:401638"
     CDS             1..901
                     /gene="EXOC1"
                     /coded_by="XM_041484037.1:256..2961"
                     /db_xref="GeneID:121362374"
ORIGIN      
        1 mtaikhalqr diftpnderl lsivnvckag kkkrncflca tvtterpvqv nvvkvkksdk
       61 gdfykrqtaw alrdlavvda kdavkespef dlhfdkvykw vasstveknt fisciwklnq
      121 rylrkkidfi nvssqllees vpsgenqsva ggdeeavdey qelnareeqd ieimmegcey
      181 aianaeafae klsrelqvld ganiqsimas ekqvnilmkl ldealkevdq ielklssyee
      241 mlqsvkeqmd qisesnhlih lsntnnvkll seieflvnhm dlakghikal qegdltssrg
      301 ieactnaada llqcmnvalr pghdmlhavk qqqqrfsdlr eqfarrlash lnsvfvqqft
      361 qtflqlynrs syhsvpvstg hdqsstlaqh saeltlpnhh pfhrdllrya klmewlkntd
      421 ygkyegltkn ymdylsrlye reikdffeva kikmtgttre gkkfglhgss gkltgstssl
      481 nklsvqssgn rrsqssslld mgnmsasdld vadrtkfdki feqvlselep lclaeqdfis
      541 kffklqqhqs tsgtamnqve evdgvalsrs ytsgvpqtvs sekdmirqmm tkifrciepe
      601 lnnlialgdk idsfnslyml vkmshhvwta qnvdpasfls ttlgnvlvtv krnfdkcisn
      661 qmkqmdevki skkskvgilp fvaefeefaa laesifknae rrgdldkayi kliravfdsv
      721 ekvanesqkt prdvvmmenf hhifatlsrl kiscleaekk eakqkytdhl qsyviyslgq
      781 pleklnhffe gvearvaqgi reeevsyqla fnkqelrkvi keypgkevkk gldnlykkvd
      841 khlceeenll qvvwhsmqde firqykhfeg liarcypgsg itmeftiqdi ldycssiaqs
      901 h
//
LOCUS       XP_041340048             898 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041340048
VERSION     XP_041340048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..898
                     /product="exocyst complex component 1 isoform X4"
                     /calculated_mol_wt=102403
     Region          3..120
                     /region_name="PH-EXOC1"
                     /note="PH-like domain of Exocyst complex component 1;
                     cd14683"
                     /db_xref="CDD:270202"
     Region          183..875
                     /region_name="Sec3_C"
                     /note="Exocyst complex component Sec3; pfam09763"
                     /db_xref="CDD:401638"
     CDS             1..898
                     /gene="EXOC1"
                     /coded_by="XM_041484114.1:256..2952"
                     /db_xref="GeneID:121362374"
ORIGIN      
        1 mtaikhalqr diftpnderl lsivnvckag kkkrncflca tvtterpvqv nvvkvkksdk
       61 gdfykrqtaw alrdlavvda kdavkespef dlhfdkvykw vasstveknt fisciwklnq
      121 rylrkkidfi nvssqllees vpsgenqsva ggdeeavdey qelnareeqd ieimmegcey
      181 aianaeafae klsrelqvld ganiqsimas ekqvnilmkl ldealkevdq ielklssyee
      241 mlqsvkeqmd qisesnhlih lsntnnvkll seieflvnhm dlakghikal qegdltssrg
      301 ieactnaada llqcmnvalr pghdmlhavk qqqqrfsdlr eqfarrlash lnsvfvqqft
      361 qtflqlynrs syhsvpghdq sstlaqhsae ltlpnhhpfh rdllryaklm ewlkntdygk
      421 yegltknymd ylsrlyerei kdffevakik mtgttregkk fglhgssgkl tgstsslnkl
      481 svqssgnrrs qssslldmgn msasdldvad rtkfdkifeq vlseleplcl aeqdfiskff
      541 klqqhqstsg tamnqveevd gvalsrsyts gvpqtvssek dmirqmmtki frciepelnn
      601 lialgdkids fnslymlvkm shhvwtaqnv dpasflsttl gnvlvtvkrn fdkcisnqmk
      661 qmdevkiskk skvgilpfva efeefaalae sifknaerrg dldkayikli ravfdsvekv
      721 anesqktprd vvmmenfhhi fatlsrlkis cleaekkeak qkytdhlqsy viyslgqple
      781 klnhffegve arvaqgiree evsyqlafnk qelrkvikey pgkevkkgld nlykkvdkhl
      841 ceeenllqvv whsmqdefir qykhfeglia rcypgsgitm eftiqdildy cssiaqsh
//
LOCUS       XP_041340124             887 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041340124
VERSION     XP_041340124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..887
                     /product="exocyst complex component 1 isoform X5"
                     /calculated_mol_wt=101000
     Region          3..120
                     /region_name="PH-EXOC1"
                     /note="PH-like domain of Exocyst complex component 1;
                     cd14683"
                     /db_xref="CDD:270202"
     Region          190..864
                     /region_name="Sec3_C"
                     /note="Exocyst complex component Sec3; pfam09763"
                     /db_xref="CDD:401638"
     CDS             1..887
                     /gene="EXOC1"
                     /coded_by="XM_041484190.1:256..2919"
                     /db_xref="GeneID:121362374"
ORIGIN      
        1 mtaikhalqr diftpnderl lsivnvckag kkkrncflca tvtterpvqv nvvkvkksdk
       61 gdfykrqtaw alrdlavvda kdavkespef dlhfdkvykw vasstveknt fisciwklnq
      121 rylrkkidfi nvssqlleel pkvaeesvps genqsvaggd eeavdeyqel nareeqdiei
      181 mmegceyaia naeafaekls relqvldgan iqsimasekq vnilmkllde alkevdqiel
      241 klssyeemlq svkeqmdqis esnhlihlsn tnnvkllsei eflvnhmdla kghikalqeg
      301 dltssrgiea ctnaadallq cmnvalrpgh dmlhavkqqq qrfsdlreqf arrlashlns
      361 vfvqqghdqs stlaqhsael tlpnhhpfhr dllryaklme wlkntdygky egltknymdy
      421 lsrlyereik dffevakikm tgttregkkf glhgssgklt gstsslnkls vqssgnrrsq
      481 ssslldmgnm sasdldvadr tkfdkifeqv lseleplcla eqdfiskffk lqqhqstsgt
      541 amnqveevdg valsrsytsg vpqtvssekd mirqmmtkif rciepelnnl ialgdkidsf
      601 nslymlvkms hhvwtaqnvd pasflsttlg nvlvtvkrnf dkcisnqmkq mdevkiskks
      661 kvgilpfvae feefaalaes ifknaerrgd ldkayiklir avfdsvekva nesqktprdv
      721 vmmenfhhif atlsrlkisc leaekkeakq kytdhlqsyv iyslgqplek lnhffegvea
      781 rvaqgireee vsyqlafnkq elrkvikeyp gkevkkgldn lykkvdkhlc eeenllqvvw
      841 hsmqdefirq ykhfegliar cypgsgitme ftiqdildyc ssiaqsh
//
LOCUS       XP_041340202             880 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041340202
VERSION     XP_041340202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484268.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..880
                     /product="exocyst complex component 1 isoform X6"
                     /calculated_mol_wt=100233
     Region          3..120
                     /region_name="PH-EXOC1"
                     /note="PH-like domain of Exocyst complex component 1;
                     cd14683"
                     /db_xref="CDD:270202"
     Region          183..857
                     /region_name="Sec3_C"
                     /note="Exocyst complex component Sec3; pfam09763"
                     /db_xref="CDD:401638"
     CDS             1..880
                     /gene="EXOC1"
                     /coded_by="XM_041484268.1:256..2898"
                     /db_xref="GeneID:121362374"
ORIGIN      
        1 mtaikhalqr diftpnderl lsivnvckag kkkrncflca tvtterpvqv nvvkvkksdk
       61 gdfykrqtaw alrdlavvda kdavkespef dlhfdkvykw vasstveknt fisciwklnq
      121 rylrkkidfi nvssqllees vpsgenqsva ggdeeavdey qelnareeqd ieimmegcey
      181 aianaeafae klsrelqvld ganiqsimas ekqvnilmkl ldealkevdq ielklssyee
      241 mlqsvkeqmd qisesnhlih lsntnnvkll seieflvnhm dlakghikal qegdltssrg
      301 ieactnaada llqcmnvalr pghdmlhavk qqqqrfsdlr eqfarrlash lnsvfvqqgh
      361 dqsstlaqhs aeltlpnhhp fhrdllryak lmewlkntdy gkyegltkny mdylsrlyer
      421 eikdffevak ikmtgttreg kkfglhgssg kltgstssln klsvqssgnr rsqssslldm
      481 gnmsasdldv adrtkfdkif eqvlselepl claeqdfisk ffklqqhqst sgtamnqvee
      541 vdgvalsrsy tsgvpqtvss ekdmirqmmt kifrciepel nnlialgdki dsfnslymlv
      601 kmshhvwtaq nvdpasflst tlgnvlvtvk rnfdkcisnq mkqmdevkis kkskvgilpf
      661 vaefeefaal aesifknaer rgdldkayik liravfdsve kvanesqktp rdvvmmenfh
      721 hifatlsrlk iscleaekke akqkytdhlq syviyslgqp leklnhffeg vearvaqgir
      781 eeevsyqlaf nkqelrkvik eypgkevkkg ldnlykkvdk hlceeenllq vvwhsmqdef
      841 irqykhfegl iarcypgsgi tmeftiqdil dycssiaqsh
//
LOCUS       XP_041340327            1704 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340327
VERSION     XP_041340327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1704
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 2"
                     /calculated_mol_wt=194232
     Region          25..82
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          491..583
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          591..683
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          688..808
                     /region_name="ArfGap_ARAP2"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing protein 2; cd08856"
                     /db_xref="CDD:350081"
     Site            order(708,711,728,731,736)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350081"
     Site            order(708,711,728,731)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350081"
     Region          900..1010
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1024..1118
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1122..1301
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1159,1198,1202,1271,1274..1275,1291)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1159
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1333..1430
                     /region_name="RA_ARAP2"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 2 (ARAP2); cd17227"
                     /db_xref="CDD:340747"
     Region          1441..1550
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..1704
                     /gene="ARAP2"
                     /coded_by="XM_041484393.1:186..5300"
                     /db_xref="GeneID:121362670"
ORIGIN      
        1 mqpdyfymtv wgnirnevms stgndsdiee flvninlahy lpnfkkygyn tvtdcmginn
       61 nvlqqmgvlp tghrrrilkq ldslleiqgn slfrenlkfk dlkgleekqy sssdqespvs
      121 nsivdrtgli pvtsseqllk kscvnkekle laeedsmean ddsftnldfs slyqnsdsil
      181 navsqnrntn tntqqdallt eaatcqadeh ltgslvfrdp psfvrscetk ckenkqqrfv
      241 degdlsdskp dspfykfkge mvdndlydsc tlncmkvfpr asrsfilrhr pvpeipepsk
      301 vqpsssslqr rrnmglvnis ctgrqisqnn tfveekppii spygetficd nakdakelhg
      361 neflacenkl dlgmneeyss knlcyfsnqk ektkeiakne slsqedpslt aeesesesvy
      421 stveqhslsl kkkknktktl sgscskiqsg dsdrlaseqt nfwqfggdqt ligndsitpy
      481 acfygpsvkk vkagwldkls pqgkrvfqkr wvkfdgesis yynnekemfs kgiillsaia
      541 tvrvhgenkf evvtshrtfv frvdkeeern dwvntmlnal klmpdnnsqs rtsvtpeksg
      601 ylelkgyktk ifillqgstv wickneqdfk tgfgitlipm nvanvkqvdr aakqsfeiit
      661 pyksfsftae serekqdwie alqqsiaetl sdyevaekiw fnesnrscad ckapgpdwas
      721 inlcvvickk cagqhrslgp rdskvrslkm dasiwsneli elfivignkr ansfwagnlp
      781 pdeelhiddp aekritfitq kykegkfrkt pfhyktkeql nkalcaavvk qdvletlmll
      841 fsgadamcat gdpvnstpyl lakkagqrlq meflyhnkfs dfpnydpcse sgfsedsshs
      901 tflceflykv ssnvaklpte kklkedcnkr wctlesgfls yyendktttp ngmidisevi
      961 clvvhkssff inrgdiftfe iyllservfl fgaetahsqr kwtsaiakhf vppvaeslle
     1021 rncdligqly ykdchnldqw rkgwfaieks slyfclemed aeedsiylrr lqelttssvm
     1081 qngekidvll lvekgrtlyi hghtkldfmv wytaiekaag tdgnalqdqq lskndvpiiv
     1141 nsciafvtqy glgskqiylk ngdssnvael lesfkkdars vklragkhql edvtdvlksf
     1201 lsqiddallt kelypfwisa ldtqnekerv rkyrafirsl ppvnratlaa liehlyrvqk
     1261 cseinqmnpq nlavvfsscl fqtkgqtsee vnviedlikn yvqlfhined qvkqmdiens
     1321 fitkwkdtqv sqagdlliev yverkepdcs iiirvsplme aeeltndvlg ikniipskdd
     1381 iwaafevlen gelerplhyt envleqvlhw sslpepgtay liikrfltad mvnlysekne
     1441 kgsvkagnlk ykeepsklls gnkfqdryfv lqegnlllyk dmkaskpekv lpvsslklyl
     1501 gvkkkmkppt nwglavfsek yqwymccdgq dvqmewmisi fmaqhadiwp pagkarkqsi
     1561 tkspkirglp lipihqeknt ckirenteni elqagksrfg ehhdnellee rknlkekasi
     1621 vaqclerkee kgrnhakthr nliseddags gmtelhqiph ktlkknknkt nkttleldsk
     1681 lpsdviqeln tvlqknraln etss
//
LOCUS       XP_041340458             534 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 2, facilitated glucose transporter member 9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041340458
VERSION     XP_041340458.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484524.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 9"
                     /calculated_mol_wt=58429
     Region          35..486
                     /region_name="MFS_GLUT_Class2"
                     /note="Class 2 Glucose transporters (GLUTs) of the Major
                     Facilitator Superfamily; cd17432"
                     /db_xref="CDD:340990"
     Site            order(47,51,182,185..186,189,303..304,308..309,312..313,
                     340,402..403,406..407,411,434..435,438)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340990"
     CDS             1..534
                     /gene="SLC2A9"
                     /coded_by="XM_041484524.1:34..1638"
                     /db_xref="GeneID:121362721"
ORIGIN      
        1 mdgaaepead alvkrgaggs grarrgnwsg slivasltga fgssflygyn lsvvnapagy
       61 ikkfynetwe rrygfsvdeg tltllwsitv sifaigglvg aiivtpivkf fgrkctlvln
      121 nvfavaaall mslsllagsf emlilgriim gvdagislsa lpmylseisp keirgslgqv
      181 taificigvf tgqvlglpei fgqesrwpfl fgaiivpsli qvvilpflpe sprylllekh
      241 nrskaeqafq kflgkddvsh eieevlaesr aqrntklvsv vqllrtravr wqiltvvvtm
      301 gcyqlcglna iwyytnnifs esgisretip yvtlstgave tlaavfsglv ierlgrrpll
      361 iggfglmivf favltvsltl qntvywlpyl sifcilaiia sfcigpggip fvltgelfqq
      421 sqrpaafmia gtvnwlcnfa vgllfpfiqa glqtycflvf agicfagaay lffvlpetkn
      481 ktfheisqaf akrnkvtlem qemnhypger kqseeqesnf tssvdngeti kriv
//
LOCUS       XP_041340582             277 aa            linear   VRT 06-MAY-2021
DEFINITION  ribose-5-phosphate isomerase [Pyrgilauda ruficollis].
ACCESSION   XP_041340582
VERSION     XP_041340582.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484648.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="ribose-5-phosphate isomerase"
                     /calculated_mol_wt=30054
     Region          47..264
                     /region_name="RPI_A"
                     /note="Ribose 5-phosphate isomerase type A (RPI_A)
                     subfamily; RPI catalyzes the reversible conversion of
                     ribose-5-phosphate to ribulose 5-phosphate, the first step
                     of the non-oxidative branch of the pentose phosphate
                     pathway. This reaction leads to the...; cd01398"
                     /db_xref="CDD:238692"
     Site            order(70,99,102..103,112,114,141..142,206..207,216,218,
                     222)
                     /site_type="other"
                     /note="tetramer (dimer of dimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238692"
     Site            order(70,72..73,126..127,129,139..142,148,166)
                     /site_type="active"
                     /db_xref="CDD:238692"
     Site            order(115,119,147,154,185..186,188..190,193,242..243,248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238692"
     CDS             1..277
                     /gene="RPIA"
                     /coded_by="XM_041484648.1:83..916"
                     /db_xref="GeneID:121362788"
ORIGIN      
        1 mrlpgrlall rstplaarpp grvrtgraaa rrgfsrgrlg gtmaeeakkr aafaavdkhv
       61 qnnqvlgigs gstivhavqr laervkeenl tivciptsfq arqlilqngl tlsdldrnpe
      121 ldvaidgade vdcdlnlikg gggcltqeki vagfakcfiv iadyrkksds lgeqwkkgip
      181 ievipmayvp vtkaltkkfg gvvelrmavn kagpvvtdng nfildwkfdk vhewrevnsa
      241 ikmipgvvet glfidmaevv yfgmedgsvs vrekqpc
//
LOCUS       XP_041340713             270 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-B1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340713
VERSION     XP_041340713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484779.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="homeobox protein Hox-B1-like"
                     /calculated_mol_wt=29047
     Region          181..234
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..270
                     /gene="LOC121362854"
                     /coded_by="XM_041484779.1:1..813"
                     /db_xref="GeneID:121362854"
ORIGIN      
        1 mdpggkpsre deemdvrmdl rmdlrdlrvd lrekaeplar cepgrgragp ggsaereget
       61 pqredpsgrs cpgvfwvfsg ktselgllgq pnairtnfrd gcpdgspdgs pgspggspgk
      121 aeprarcepg rgragpggsa eregetpqre dpsgrscpgv fwvfsgktse lgllgqpnai
      181 rtnfstkqlt elekefhfnk yltrarrvei aatlelnetq vkiwfqnrrm kqkkrekegl
      241 apaaargapk eaaegsdqss peaspssgss
//
LOCUS       XP_041340832             294 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein MSX-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340832
VERSION     XP_041340832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484898.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="homeobox protein MSX-1"
                     /calculated_mol_wt=30878
     Region          168..224
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..294
                     /gene="MSX1"
                     /coded_by="XM_041484898.1:68..952"
                     /db_xref="GeneID:121362921"
ORIGIN      
        1 mapavdmtaa ptgvrsdelp asafsspggg alpvaaamgg eeesdkpkvs psllpfsvea
       61 lmadhrkpgg rdgpegagpp pgagaapras lsprlgalsa eappsplplg ghfsvgglvk
      121 lpedtlvkae spekqerspw mqtprfsppp prrlsppact lrkhktnrkp rtpfttaqll
      181 alerkfrqkq ylsiaeraef ssslsltetq vkiwfqnrra kakrlqeael eklkmaakpm
      241 lppaafgisf plggpavaga slygasspfq raglpvapvg lytahvgysm yhlt
//
LOCUS       XP_041340954             441 aa            linear   VRT 06-MAY-2021
DEFINITION  histamine H2 receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340954
VERSION     XP_041340954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485020.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="histamine H2 receptor-like"
                     /calculated_mol_wt=49334
     Region          104..392
                     /region_name="7tmA_amine_R-like"
                     /note="amine receptors and similar proteins, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd14967"
                     /db_xref="CDD:320098"
     Region          104..130
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320098"
     Region          137..164
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320098"
     Region          175..205
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320098"
     Site            order(178,182..183,186..187,265,268..269,272,338,341..342,
                     345,364,368,372)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:320098"
     Region          217..237
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320098"
     Region          261..317
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320098"
     Region          318..348
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320098"
     Region          358..386
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320098"
     CDS             1..441
                     /gene="LOC121363005"
                     /coded_by="XM_041485020.1:1..1326"
                     /db_xref="GeneID:121363005"
ORIGIN      
        1 mpmttiqcrr vpaaaegewe glvgkqenre qrfhafpggk egripcwsgs sgrcgaeerg
       61 ggssacldfn sgkmltdrne swlsnfssaa ssfarggvgl qevlvglvlt lidvvtllgn
      121 tvvflcpvve krlrtvtymf imslatadfl vaclvmpfsi iyevtgmwlf gklfckvwis
      181 fdvmfctasi vtlcfisldr ycsvvtpyhy srrmsrgrci vmtctvwvys slisflpvmq
      241 gwneipgvdf dagrecifvt nwvfaivasa lafflpfmvm csmyffiyra srlkatrims
      301 qtleihyhpn skrqnhlqle nkatrtisii isvfvlcwlp yfvlnvwlaa rgtdststvl
      361 lgtfkiitwl gycnstinpl lyaflnrdfq halrklllcr rrsqvdaged mvsiatfskt
      421 apnleysvtv pngapkgkpk s
//
LOCUS       XP_041341205              94 aa            linear   VRT 06-MAY-2021
DEFINITION  neuropeptide-like protein C4orf48 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041341205
VERSION     XP_041341205.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485271.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..94
                     /product="neuropeptide-like protein C4orf48 homolog"
                     /calculated_mol_wt=10337
     Region          30..90
                     /region_name="Neuropep_like"
                     /note="Neuropeptide-like; pfam15161"
                     /db_xref="CDD:317565"
     CDS             1..94
                     /gene="LOC121363125"
                     /coded_by="XM_041485271.1:46..330"
                     /db_xref="GeneID:121363125"
ORIGIN      
        1 mlapcllrra vltvplvfvv allvtepvra eqeagtaipa esrpcvdcha fefmqralqd
       61 lkktaynldt rtetlllqve krnlcdciaa nlln
//
LOCUS       XP_041341279              94 aa            linear   VRT 06-MAY-2021
DEFINITION  neuropeptide-like protein C4orf48 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041341279
VERSION     XP_041341279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..94
                     /product="neuropeptide-like protein C4orf48 homolog"
                     /calculated_mol_wt=10337
     Region          30..90
                     /region_name="Neuropep_like"
                     /note="Neuropeptide-like; pfam15161"
                     /db_xref="CDD:317565"
     CDS             1..94
                     /gene="LOC121363125"
                     /coded_by="XM_041485345.1:114..398"
                     /db_xref="GeneID:121363125"
ORIGIN      
        1 mlapcllrra vltvplvfvv allvtepvra eqeagtaipa esrpcvdcha fefmqralqd
       61 lkktaynldt rtetlllqve krnlcdciaa nlln
//
LOCUS       XP_041341389             419 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341389
VERSION     XP_041341389.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485455.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X1"
                     /calculated_mol_wt=47458
     Region          188..397
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(195..197,218..219,240,336..338,356..357,367..369,
                     385)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..419
                     /gene="ST3GAL5"
                     /coded_by="XM_041485455.1:68..1327"
                     /db_xref="GeneID:121363254"
ORIGIN      
        1 mrrrgacglg leqsagcapp papelpamls dnnsvklksd hsppvqwckv aaredektkl
       61 vfkrilalfv vggcflyilk lhldpeecdr tklpyvdldr vrraqqfasa alqeqcrpsy
      121 aknemkklfa ekysmdispf vrknmnedea lfkyeppfgf hkfsdklkdl lellpehdlp
      181 edlkpkqckr cvvvgsggil hgselghlln qfdivirlnd apvqgytdhv gnkttirmty
      241 pegaplsehe yppaslfvav lfkgvdfnwl qamvknetlp lwvrlffwke vaekipftsk
      301 qfrilnpvii ketaldilqf peprskfwgw dknvptigvt avvlathlcd evslagfgyd
      361 ldqpstplhy ynnlcmaamk eqtmhnvtse trflqklike kvvkdltggi hcefcskds
//
LOCUS       XP_041341473             417 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341473
VERSION     XP_041341473.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485539.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X2"
                     /calculated_mol_wt=47203
     Region          186..395
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(193..195,216..217,238,334..336,354..355,365..367,
                     383)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..417
                     /gene="ST3GAL5"
                     /coded_by="XM_041485539.1:68..1321"
                     /db_xref="GeneID:121363254"
ORIGIN      
        1 mrrrgacglg leqsagcapp papelpamls dnnsvklksd hsppvqwckv aaredektkl
       61 vfkrilalfv vggcflyilk lhldpeecdr tklpyvdldr raqqfasaal qeqcrpsyak
      121 nemkklfaek ysmdispfvr knmnedealf kyeppfgfhk fsdklkdlle llpehdlped
      181 lkpkqckrcv vvgsggilhg selghllnqf divirlndap vqgytdhvgn kttirmtype
      241 gaplseheyp paslfvavlf kgvdfnwlqa mvknetlplw vrlffwkeva ekipftskqf
      301 rilnpviike taldilqfpe prskfwgwdk nvptigvtav vlathlcdev slagfgydld
      361 qpstplhyyn nlcmaamkeq tmhnvtsetr flqklikekv vkdltggihc efcskds
//
LOCUS       XP_041341557             368 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341557
VERSION     XP_041341557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..368
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X3"
                     /calculated_mol_wt=42147
     Region          137..346
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(144..146,167..168,189,285..287,305..306,316..318,
                     334)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..368
                     /gene="ST3GAL5"
                     /coded_by="XM_041485623.1:223..1329"
                     /db_xref="GeneID:121363254"
ORIGIN      
        1 mrrpswflkg trkilalfvv ggcflyilkl hldpeecdrt klpyvdldrv rraqqfasaa
       61 lqeqcrpsya knemkklfae kysmdispfv rknmnedeal fkyeppfgfh kfsdklkdll
      121 ellpehdlpe dlkpkqckrc vvvgsggilh gselghllnq fdivirlnda pvqgytdhvg
      181 nkttirmtyp egaplsehey ppaslfvavl fkgvdfnwlq amvknetlpl wvrlffwkev
      241 aekipftskq frilnpviik etaldilqfp eprskfwgwd knvptigvta vvlathlcde
      301 vslagfgydl dqpstplhyy nnlcmaamke qtmhnvtset rflqklikek vvkdltggih
      361 cefcskds
//
LOCUS       XP_041341643             366 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341643
VERSION     XP_041341643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X4"
                     /calculated_mol_wt=41892
     Region          135..344
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(142..144,165..166,187,283..285,303..304,314..316,
                     332)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..366
                     /gene="ST3GAL5"
                     /coded_by="XM_041485709.1:223..1323"
                     /db_xref="GeneID:121363254"
ORIGIN      
        1 mrrpswflkg trkilalfvv ggcflyilkl hldpeecdrt klpyvdldrr aqqfasaalq
       61 eqcrpsyakn emkklfaeky smdispfvrk nmnedealfk yeppfgfhkf sdklkdllel
      121 lpehdlpedl kpkqckrcvv vgsggilhgs elghllnqfd ivirlndapv qgytdhvgnk
      181 ttirmtypeg aplseheypp aslfvavlfk gvdfnwlqam vknetlplwv rlffwkevae
      241 kipftskqfr ilnpviiket aldilqfpep rskfwgwdkn vptigvtavv lathlcdevs
      301 lagfgydldq pstplhyynn lcmaamkeqt mhnvtsetrf lqklikekvv kdltggihce
      361 fcskds
//
LOCUS       XP_041341730             295 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341730
VERSION     XP_041341730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X5"
                     /calculated_mol_wt=33607
     Region          64..273
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(71..73,94..95,116,212..214,232..233,243..245,261)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..295
                     /gene="ST3GAL5"
                     /coded_by="XM_041485796.1:378..1265"
                     /db_xref="GeneID:121363254"
ORIGIN      
        1 mkklfaekys mdispfvrkn mnedealfky eppfgfhkfs dklkdllell pehdlpedlk
       61 pkqckrcvvv gsggilhgse lghllnqfdi virlndapvq gytdhvgnkt tirmtypega
      121 plseheyppa slfvavlfkg vdfnwlqamv knetlplwvr lffwkevaek ipftskqfri
      181 lnpviiketa ldilqfpepr skfwgwdknv ptigvtavvl athlcdevsl agfgydldqp
      241 stplhyynnl cmaamkeqtm hnvtsetrfl qklikekvvk dltggihcef cskds
//
LOCUS       XP_041341815             295 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341815
VERSION     XP_041341815.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485881.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X5"
                     /calculated_mol_wt=33607
     Region          64..273
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(71..73,94..95,116,212..214,232..233,243..245,261)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..295
                     /gene="ST3GAL5"
                     /coded_by="XM_041485881.1:362..1249"
                     /db_xref="GeneID:121363254"
ORIGIN      
        1 mkklfaekys mdispfvrkn mnedealfky eppfgfhkfs dklkdllell pehdlpedlk
       61 pkqckrcvvv gsggilhgse lghllnqfdi virlndapvq gytdhvgnkt tirmtypega
      121 plseheyppa slfvavlfkg vdfnwlqamv knetlplwvr lffwkevaek ipftskqfri
      181 lnpviiketa ldilqfpepr skfwgwdknv ptigvtavvl athlcdevsl agfgydldqp
      241 stplhyynnl cmaamkeqtm hnvtsetrfl qklikekvvk dltggihcef cskds
//
LOCUS       XP_041341883             295 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide alpha-2,3-sialyltransferase isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341883
VERSION     XP_041341883.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485949.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="lactosylceramide alpha-2,3-sialyltransferase
                     isoform X5"
                     /calculated_mol_wt=33607
     Region          64..273
                     /region_name="GT29_ST3GAL5"
                     /note="beta-galactoside alpha-2,3-sialyltransferase 5;
                     cd23983"
                     /db_xref="CDD:467711"
     Site            order(71..73,94..95,116,212..214,232..233,243..245,261)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467711"
     CDS             1..295
                     /gene="ST3GAL5"
                     /coded_by="XM_041485949.1:372..1259"
                     /db_xref="GeneID:121363254"
ORIGIN      
        1 mkklfaekys mdispfvrkn mnedealfky eppfgfhkfs dklkdllell pehdlpedlk
       61 pkqckrcvvv gsggilhgse lghllnqfdi virlndapvq gytdhvgnkt tirmtypega
      121 plseheyppa slfvavlfkg vdfnwlqamv knetlplwvr lffwkevaek ipftskqfri
      181 lnpviiketa ldilqfpepr skfwgwdknv ptigvtavvl athlcdevsl agfgydldqp
      241 stplhyynnl cmaamkeqtm hnvtsetrfl qklikekvvk dltggihcef cskds
//
LOCUS       XP_041342004             508 aa            linear   VRT 06-MAY-2021
DEFINITION  NK1 transcription factor-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041342004
VERSION     XP_041342004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486070.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 78% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="NK1 transcription factor-related protein 1"
                     /calculated_mol_wt=50766
     CDS             1..508
                     /gene="NKX1-1"
                     /coded_by="XM_041486070.1:1..1527"
                     /db_xref="GeneID:121363590"
ORIGIN      
        1 mnvsrdkvgd isipaaaaaa vtapaagigg eprgchgegm dgrgeqrlsa ggelplycpa
       61 nrdrqgdsqs ntpgqegava alpvvhrtts fsvldildpn kfnskrrqca glyksagtef
      121 tlgaedkped sgtelaeqka laedfdackk saeliskdgq elpvssgsgk qlgsgssgfg
      181 glesrprgcd kpplvppprl gpprrlssrr clvgalvavg rgnipypgqv whrllpkvgg
      241 segavlaqpp ragqplsgrr aavpspilaa adsswhcppa qprlraaaaa phprgparph
      301 phggrrgrgg regqprypgs pvlraagtpg ggtpraprgr tggagggrgg gragrrgalt
      361 aavacpqrtg sstrprsatw ttaagraaap tascrttrsc aarraaapaa aaaapaprrp
      421 erpsgggggg agaglgggal pgglsplshs ppmgtplsmh gpgsyaghpa gglvcaaqlp
      481 flpspavlsp fvlgsqtyga pafytphl
//
LOCUS       XP_041342135             366 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121363646 [Pyrgilauda ruficollis].
ACCESSION   XP_041342135
VERSION     XP_041342135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486201.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="uncharacterized protein LOC121363646"
                     /calculated_mol_wt=39356
     Region          280..349
                     /region_name="SLBP_RNA_bind"
                     /note="Histone RNA hairpin-binding protein RNA-binding
                     domain; pfam15247"
                     /db_xref="CDD:464587"
     CDS             1..366
                     /gene="LOC121363646"
                     /coded_by="XM_041486201.1:1..1101"
                     /db_xref="GeneID:121363646"
ORIGIN      
        1 mrelvfpcic ersgpgdaag grccegsgal gvreaapvps qgrrtlfsap vrptgnaagt
       61 spcralpaap alpaggraap alppqpgrag pgpcwasggg gagraaqvga aaggrgagra
      121 gvrrwlsrgg sacpgrlrrq vpavqplllr qtdpcpaasp pvrwrgrnqq pragarrdap
      181 arlralglgv rlewagsans vqhphcwhqe qehgscndsd slvfeeyrcg hshhcsttse
      241 hsgplsscss wegrteegnt mktsnkkmtn nsanpgeret devvlrrrqk qinfgkntla
      301 ydryikevpk nqrlpgvhpt tpnkfkkysr rswdrqiklw kialhawdpp aeetwdlqpv
      361 yvlwvn
//
LOCUS       XP_041342263             316 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 42-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041342263
VERSION     XP_041342263.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486329.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 35% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="coiled-coil domain-containing protein 42-like"
                     /calculated_mol_wt=37233
     Region          66..178
                     /region_name="DUF4200"
                     /note="Domain of unknown function (DUF4200); pfam13863"
                     /db_xref="CDD:464003"
     CDS             1..316
                     /gene="LOC121363706"
                     /coded_by="XM_041486329.1:1..951"
                     /db_xref="GeneID:121363706"
ORIGIN      
        1 mvvvtygksl gkenqsvask vavldlkglc snfisiyvpd vltverkvte edsqssllql
       61 lkkkkearem kkamaekeea frekmkviad rwrdlhakra qlkarversg rtvqkneelr
      121 iqalkiknkq reeqiekdce llrakmelet lrkkhrklyk kvqkysifkk yledvvevsq
      181 fedisevtae ykllvrtrkd llqsqqghkq lteqdnmfle qykaqkeaei lqyknelvql
      241 klrfyqaqsd iplweahwad iqdrtskktg klwtiklaih nlfqstntrl qaewnvlecn
      301 scrqlnmvkp sqeeeq
//
LOCUS       XP_041342383             277 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: homeobox protein Nkx-3.2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041342383
VERSION     XP_041342383.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486449.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="LOW QUALITY PROTEIN: homeobox protein Nkx-3.2"
                     /calculated_mol_wt=29639
     Region          151..207
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..277
                     /gene="NKX3-2"
                     /coded_by="XM_041486449.1:240..1073"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121363774"
ORIGIN      
        1 msvrggnalt pfsiqailnk kexaggwrlc gaaedpllpa paarapaprt pagwdsdfal
       61 sedpegerrs eeegaggsar laeatgggrp aeeeaqppea aerdttglsd semsaavsdr
      121 sppeeedgag kcgnllpgee eaaaapkprk krsraafsha qvfelerrfn hqrylsgper
      181 adlaaslklt etqvkiwfqn rryktkrrqm aadllaaapa akkvavkvlv rddqrqyhpg
      241 evlrppslls lqpsyyypyy clpgwalstc aaaagtq
//
LOCUS       XP_041342516             763 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger and BTB domain-containing protein 49 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041342516
VERSION     XP_041342516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="zinc finger and BTB domain-containing protein
                     49"
                     /calculated_mol_wt=84342
     Region          7..118
                     /region_name="BTB_POZ_ZBTB49"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 49 (ZBTB49); cd18233"
                     /db_xref="CDD:349542"
     Region          170..551
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          395..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(400,402,404,406..407,410..411,414,428,430,434..435,
                     438..439,442,456,458,460,462..463,466..467,470)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          423..443
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          451..471
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          479..499
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          507..527
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(512,514,516,518..519,522..523,526,540,542,546..547,
                     550..551,554,568,570,572,574..575,578..579,582)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          535..555
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          547..572
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          563..583
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..763
                     /gene="ZBTB49"
                     /coded_by="XM_041486582.1:350..2641"
                     /db_xref="GeneID:121363834"
ORIGIN      
        1 mdtvashsch llqqlheqri qgllcdcmlv vkgvcfkahk nvlaafsqyf rtlfqnssgq
       61 kndvfhldik nvggigqild fmytshldls qdnvqamldi aqclqvqnvl nichtflkss
      121 taveqaasmp cnsvfslqnt lgtgtscagd gygtnllpec sadrqtnkgl aehhsqsvnl
      181 htpsgdgqkp pqdsldgnct elpfkqpsyy yklrnfyskq fykqnacsdh ergaepsfsy
      241 ststeintve snsctvnhse ciletsehlp snflvqaase aapdqnaett vmqpsrqmrl
      301 kkavhlkkln flrsqksaeq ppepqredsr iteviepvne sttdaanarv tdekeaedvv
      361 nsenfepave versqdpleq egqsqtlqsq kqytcelcgk afkhpsnlel hkrshtgekp
      421 fecnicgkhf sqagnlqthl rrhsgekpyi cevcgkrfaa sgdvqrhiii hsgekphlcd
      481 icgrgfsnfs nlkehkktht adkvftcdec gksfnmqrkl vkhrirhtge rpyscsacgk
      541 cfagsgdlrr hvrthtgekp ytcetcnkcf trsavlrrhk kmhckaseeg psaleeftpg
      601 iqtpdldksq ssdsfgpems vtllpvsvkf pmhpagnspe fdssadsyck lrsmiqhhds
      661 anpeklgvdp akllkaqaqq tpaappayay pevdvsaaee plqpdgipmi rssvpgldgh
      721 caeplgsras saayksnegp ffssmtlwgl amktlqnese leq
//
LOCUS       XP_041342602             763 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger and BTB domain-containing protein 49 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041342602
VERSION     XP_041342602.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486668.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="zinc finger and BTB domain-containing protein
                     49"
                     /calculated_mol_wt=84342
     Region          7..118
                     /region_name="BTB_POZ_ZBTB49"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 49 (ZBTB49); cd18233"
                     /db_xref="CDD:349542"
     Region          170..551
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          395..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(400,402,404,406..407,410..411,414,428,430,434..435,
                     438..439,442,456,458,460,462..463,466..467,470)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          423..443
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          451..471
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          479..499
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          507..527
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(512,514,516,518..519,522..523,526,540,542,546..547,
                     550..551,554,568,570,572,574..575,578..579,582)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          535..555
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          547..572
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          563..583
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..763
                     /gene="ZBTB49"
                     /coded_by="XM_041486668.1:56..2347"
                     /db_xref="GeneID:121363834"
ORIGIN      
        1 mdtvashsch llqqlheqri qgllcdcmlv vkgvcfkahk nvlaafsqyf rtlfqnssgq
       61 kndvfhldik nvggigqild fmytshldls qdnvqamldi aqclqvqnvl nichtflkss
      121 taveqaasmp cnsvfslqnt lgtgtscagd gygtnllpec sadrqtnkgl aehhsqsvnl
      181 htpsgdgqkp pqdsldgnct elpfkqpsyy yklrnfyskq fykqnacsdh ergaepsfsy
      241 ststeintve snsctvnhse ciletsehlp snflvqaase aapdqnaett vmqpsrqmrl
      301 kkavhlkkln flrsqksaeq ppepqredsr iteviepvne sttdaanarv tdekeaedvv
      361 nsenfepave versqdpleq egqsqtlqsq kqytcelcgk afkhpsnlel hkrshtgekp
      421 fecnicgkhf sqagnlqthl rrhsgekpyi cevcgkrfaa sgdvqrhiii hsgekphlcd
      481 icgrgfsnfs nlkehkktht adkvftcdec gksfnmqrkl vkhrirhtge rpyscsacgk
      541 cfagsgdlrr hvrthtgekp ytcetcnkcf trsavlrrhk kmhckaseeg psaleeftpg
      601 iqtpdldksq ssdsfgpems vtllpvsvkf pmhpagnspe fdssadsyck lrsmiqhhds
      661 anpeklgvdp akllkaqaqq tpaappayay pevdvsaaee plqpdgipmi rssvpgldgh
      721 caeplgsras saayksnegp ffssmtlwgl amktlqnese leq
//
LOCUS       XP_041342717             361 aa            linear   VRT 06-MAY-2021
DEFINITION  cell growth-regulating nucleolar protein [Pyrgilauda ruficollis].
ACCESSION   XP_041342717
VERSION     XP_041342717.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486783.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="cell growth-regulating nucleolar protein"
                     /calculated_mol_wt=41690
     Region          4..28
                     /region_name="zf-ACC"
                     /note="Acetyl-coA carboxylase zinc finger domain;
                     pfam17848"
                     /db_xref="CDD:436090"
     Region          31..58
                     /region_name="zf-LYAR"
                     /note="LYAR-type C2HC zinc finger; pfam08790"
                     /db_xref="CDD:462605"
     CDS             1..361
                     /gene="LYAR"
                     /coded_by="XM_041486783.1:186..1271"
                     /db_xref="GeneID:121363949"
ORIGIN      
        1 mvvftcnacg eavkkaqvek hvnicrncqc lscmdcgkdf wgddykehvk cvsedqkygg
       61 kgfeakaskg dakqqewiqk iqevmkkpni spkvrnileq irafdniprk kikfqnwikn
      121 slrindsnlq dqvwdvfsea nssnekeqdk pqqkeeqqsa etgknakaee ngitdtkter
      181 kkskrerkee rqknkkkekk dlklenqeev kkskkskkgk esvedefgin gngnhsetee
      241 etnvkkrkhk haeeephtkt krmktesise dmetenindn eenvgtdkgk fnwkgtikav
      301 lkqapdneis ikklrkkvia qyyaiagech kteeeilatf nkkvnnnpkf rvlkdkvklv
      361 k
//
LOCUS       XP_041342854             217 aa            linear   VRT 06-MAY-2021
DEFINITION  PACRG-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041342854
VERSION     XP_041342854.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041486920.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="PACRG-like protein"
                     /calculated_mol_wt=23596
     Region          47..214
                     /region_name="ParcG"
                     /note="Parkin co-regulated protein; pfam10274"
                     /db_xref="CDD:431190"
     CDS             1..217
                     /gene="PACRGL"
                     /coded_by="XM_041486920.1:310..963"
                     /db_xref="GeneID:121364011"
ORIGIN      
        1 mssgiqiktk saaqksktcs pesqpkpsak lnpktidpfr aysqppsafa atyarggipc
       61 rlvhgsvkhk lqwecppetv pfdpllltla eglretkhpy tfvskegfke lllvegaaek
      121 vipllprlvp vlkaalahad devfgrglda lvqlsavvgp slndhlklll tnllkrlmdk
      181 kyreevtval qklercggka tvaiikskip tycsiys
//
LOCUS       XP_041342944             217 aa            linear   VRT 06-MAY-2021
DEFINITION  PACRG-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041342944
VERSION     XP_041342944.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487010.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="PACRG-like protein"
                     /calculated_mol_wt=23596
     Region          47..214
                     /region_name="ParcG"
                     /note="Parkin co-regulated protein; pfam10274"
                     /db_xref="CDD:431190"
     CDS             1..217
                     /gene="PACRGL"
                     /coded_by="XM_041487010.1:239..892"
                     /db_xref="GeneID:121364011"
ORIGIN      
        1 mssgiqiktk saaqksktcs pesqpkpsak lnpktidpfr aysqppsafa atyarggipc
       61 rlvhgsvkhk lqwecppetv pfdpllltla eglretkhpy tfvskegfke lllvegaaek
      121 vipllprlvp vlkaalahad devfgrglda lvqlsavvgp slndhlklll tnllkrlmdk
      181 kyreevtval qklercggka tvaiikskip tycsiys
//
LOCUS       XP_041343071            3020 aa            linear   VRT 06-MAY-2021
DEFINITION  huntingtin [Pyrgilauda ruficollis].
ACCESSION   XP_041343071
VERSION     XP_041343071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487137.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3020
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3020
                     /product="huntingtin"
                     /calculated_mol_wt=335136
     Region          1393..1433
                     /region_name="DUF3652"
                     /note="Huntingtin protein region; pfam12372"
                     /db_xref="CDD:463554"
     CDS             1..3020
                     /gene="HTT"
                     /coded_by="XM_041487137.1:216..9278"
                     /db_xref="GeneID:121364108"
ORIGIN      
        1 matmekltka feslrsfqqq qgpaalpeep lqrpkkelaa tkkdrvnhcl ticenivaqs
       61 lrnspefqkl lgiamelfll csedaesdvr mvadeclnkv ikalmdsnlp rlqlelykei
      121 kkngasrslr aalwrfaela hlvrpqkcrl sckrrykedq qihkvlpcll vpveddrptl
      181 lilgvlltlr ylipllqqqv kdtslkgsfg vtrketeisp speqliqvye ltlhytqhqd
      241 hnvvtgalel lqqlfrtppp ellhaltacg giaqvsvskd epasrsrsgs iveliagggs
      301 scspvlarkh kgkvllgeee gldddsetrs dvssasfaas vkgeitsela sssgvstggs
      361 vgssaadatg hdiiteqprs qhtlqsdsve lagcdltsta tegeedevls rsssqisavq
      421 sdatmdlndg tqasspisds sqtttegpds avtpsdssei vlegaegqys gmqigqlqde
      481 edeaanilqd dssesfrnss lalqqshllk tmshsrqpsd ssvdrftpke daadagdhen
      541 kpsrvkgdig hytdrdcapl vhcvrllsas flltgdkgal vpdrdvrvsv kalavscvga
      601 avalhpesff sklyktplea mgeeyeeqyv sdilnyidhg dpqirgatai lcgtivnsil
      661 iksrfdvekw linvrsstgn lfslidcipl lqktlkdess vtcklactav rhcimslcss
      721 syselglqli vdllalknss ywlvrtelle tlaevdfrlv nflegktesl hrgihhytgl
      781 lklqervlen vvisllgded prvrhvaaas lmrlvpklfy ncdqgqadpv vavardqssv
      841 ylkllmhetq ppshfavsti trayrgynml qsptdvtmen nlsrviaais haltisttra
      901 ltfgccealc llsttfpvct wsvgwhcgvs qpsssdeaqk gctigmaglv lsllssawfp
      961 ldlsahqdal iltgnllaas apkclknpws aeedanqgaa kqeepwpals dralvtlveq
     1021 lfshllkvin icahvmddva pgpavkaalp sltnppslsp irrkgkeres veqasvpmsp
     1081 kksgeaspas rqtdatgpvp tsksssvgsf yhlpsylkly dvlkathany kvtldlqntn
     1141 ekfgcflrsa ldvlsqilel atlqdigkcv eeilgylksc fnreptmatv cvqqllktlf
     1201 gtnlasqydg lssnpskaqg kaqrlgssnl rpglyhycfm apythftqal adaslrnmvq
     1261 aeqehdasgw fdvlqkvstq lktsissaak hradknaihn hirlfeplvi kalkqytttt
     1321 svqlqrqvld llaqlvqlrv nyclldsdqv figfvlkqfe yievgqfres eaiipnifff
     1381 lvllsyeryh skqiigipki iqlcdgimas grkavthaip alqpivhdlf vlrgtnkada
     1441 gkeletqkev vvsmllrliq yhqvlemfil vlqqchkene dkwkrlsrqi adiilpmlak
     1501 qqmhidshda lgvlntlfei lapsslrpvd mllrsmfvtp ktmasvstvq lwisgilail
     1561 rvlisqsted ivlsriqels fspyliscqa inrlrcgenn vstpedrtev kqvkyppeet
     1621 fsrfllqlvg illedivtkq lkvdmneqqh tfycqelgtl lmclihifks gmfrritaaa
     1681 trlftgdgsd gsfytlesls dlvqsmipth pslvllwchi lllvnytnyn wwsevhqtpk
     1741 rhslsttkll sphisgdsde sdleskrgmc nreivrrgal ilfcdyvcqn lhdsehltwl
     1801 ivnhvqdlin lsheppvqdf isavhrnsaa sglfiqaiqs rcenlaaptt lkktlqcleg
     1861 ihlsqsgavl tlyvdkllct pfrvlarmvd tlacrrveml laatlqnsia qlpveeldri
     1921 qeylqnsgla arhqrlysll drfrlmvapd ttspsplvts hpldgedqpp lenvvldkdw
     1981 yvslvrsqcy iksdsalleg aelvnripqp dlssfmtske fnlsllapcl slgmneisrd
     2041 qksslfetar rvtldhvsaa vqnlpgnhqv fqpllpteps tywkklsdif gdevmyqsmm
     2101 tlcralaqyl lllsklpagl rvppdkegdi lkfvvmsiea lswhlahdqi plsvdlqagl
     2161 dcccltlqqp tlwnllssaa hvtyacslin cirfiieava vepgnqllsp erkntskpls
     2221 egeidsnvqk tkhiiaacem iaemveclqt vlslghkrns sipafltpvl kniiislarl
     2281 plvnsytrvp plvwklgwsp kpsgdfgtvf peipveflqe keifkefiyr intlgwisrt
     2341 qfeetwatll gvlvtqpivm dqeenqqeed tertqinvla vqaitslvls amtipvagnp
     2401 avscleqqpr nkalkaldtr fgrklsvirg iveqeiqamv skrdniathh lyqawdpvps
     2461 lspattgali sheklllqin tereigdmdy klgqvsihsi wlgnnitplr eeewgedeed
     2521 endvpapssp pispintrkh ragvdihscs qfllelysqw ilpsnpskrt pvilisevvr
     2581 sllavsdlft ernqfemmyt tltelrkvhp sedeilvqyl ipatckaaav lgmdkavaep
     2641 vsrllestlr sthmpsriga lhgilyilec dlldetakql ipiiseylls nlrgvahcvn
     2701 ihnqehilvm caaafylien ypldvgpefs agiiqmcgvm vsgsdestps iiyhcvlrgl
     2761 erlllseqls rldseslvkl svdrvnvqsp hramaalglm ltcmytgkek ispsripdan
     2821 pgapdsesvi vamervsvlf drirkgfpfe arvvarilpq flddffppqd vmnkvigefl
     2881 snqqpypqfm atvvykvfqt lhstgqssmv rdwvmlslsn ftqrtpvama mwslscffvs
     2941 astsqwisai lphiisrmgk seqvdvnifc lvaidfyrhq ideeldrraf qsvfevvasp
     3001 gtpyhrlltc lqnvhkvtac
//
LOCUS       XP_041343209             226 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein HMX1, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041343209
VERSION     XP_041343209.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487275.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..226
                     /product="homeobox protein HMX1"
     Region          95..151
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..226
                     /gene="HMX1"
                     /coded_by="XM_041487275.1:<1..681"
                     /db_xref="GeneID:121364177"
ORIGIN      
        1 ghsplrigap gcplrdaavg wyrrahaafl gcaspdtsdr dspelpeepa eragggraaa
       61 rgpaggrpgp gsreeeeerg eepgepeqra agrkkktrtv fsrsqvfqle stfdvkryls
      121 sseraglaas lhltetqvki wfqnrrnkwk rqlaadleaa nlshaaqriv rvpilyhens
      181 pasalgftlp hmspplvgfs sgvsyplgtf paaslpflrs qmtglv
//
LOCUS       XP_041343339            1300 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 domain and tetratricopeptide repeat-containing protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041343339
VERSION     XP_041343339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487405.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1300
                     /product="SH3 domain and tetratricopeptide
                     repeat-containing protein 1"
                     /calculated_mol_wt=147992
     Region          307..361
                     /region_name="SH3_SH3TC"
                     /note="Src Homology 3 domain of SH3 domain and
                     tetratricopeptide repeat-containing (SH3TC) proteins and
                     similar domains; cd11885"
                     /db_xref="CDD:212818"
     Site            order(312,314,317,321,341..342,357,359..360)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212818"
     Region          <570..>882
                     /region_name="PEP_TPR_lipo"
                     /note="putative PEP-CTERM system TPR-repeat lipoprotein;
                     TIGR02917"
                     /db_xref="CDD:274350"
     Region          762..788
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          763..>943
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(764..765,768..769,771,795,802..803,806..807,
                     809..810,833,840..841,844..845,848)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          793..827
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          832..863
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          876..904
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <1018..>1195
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Site            order(1126,1129..1130,1133..1134,1136,1160,1169..1170,
                     1173..1174,1176..1177,1210,1213..1214,1218..1219,1222)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1126..1153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <1140..>1261
                     /region_name="COG3899"
                     /note="Predicted ATPase [General function prediction
                     only]"
                     /db_xref="CDD:443106"
     Region          1158..1194
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1209..1238
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1300
                     /gene="SH3TC1"
                     /coded_by="XM_041487405.1:1..3903"
                     /db_xref="GeneID:121364240"
ORIGIN      
        1 meslavaggt smlstntivp alegeqdrnl ereeteqemc rcdckhvesn aaistlrdgv
       61 gmdtlqeqme cspsekcmnv ssrtlpsqae nfptdislkl tmvkrksgcp dprlqrqlrg
      121 qlrllendsk evmtvfsels arllsihsdq dlivvtfktf eeiwkfltyh slgfinhcme
      181 nlfldqsfwl ysqeeedtgi evcineksln lmyrsllvqe gtffglypdn tirkmmvtdn
      241 emtyfetgaf tgdvkggsvd sdmpmwsnas leplepfhqw flkgysnpid fsyknesksi
      301 rkvargscla vmnhesivse elsfqegdki eilgyfiecm ewflgrheft gqigfvktgh
      361 vkldlsrnkl wrmvtsllpt deleepefqk aheceiarsp sspgstskng kieellknfk
      421 nleatqaeep taegkesags skteifplpe gpcfhicqed iqasdffepl llflnrkeye
      481 snfkslynfs ysfinsmfyg fseeeelvnf lrlareaakk aglswalarl cfllgrlsvk
      541 klkfsqarvy feealravag gfsdlyfvia lytnltviyl tqknkekcth ifdkaasllm
      601 gipnyicsad lesdilkyal krtilsqnkh aearacflla khysarkqhq ealpflerfq
      661 lllndlglqn slsnncyfkl aesyhekclp hivlscmkvt spqssstlmd slkridlvik
      721 napklyglrk lrqifpsqia pyliqalssv stneeeglcs tiylslakly shhkqygkai
      781 aymmkaldsa sakpeetiny lvslawlyil ykqyevalai lnavvgsaws spqqlgiayn
      841 mlaialkrtn ntkeaaesyy kalclseetd mahnqaiala nfgalclhaa asklaehyfi
      901 ravklfsklp imdcgqdfiq vllqlgcyyv ggterekgrf yyewaflvam etshlesqlq
      961 vikllchfys avapnetqcv iyneyqlsla rkmsnkvleg qiletisqly lslgterayr
     1021 saleytkrsl gifidlqkke keayawlrag kiyyvlrqne lvdlyiqvaq daalctgdpn
     1081 lgmelfeaag diffngtwek ekavtfyrdr alplavqmgn kttelrlcnk lvellmnlka
     1141 yeesleyarv alvlsvklgn qlneriayhr laaihhhlgh celaehfylk alslcssple
     1201 feeetlyyvk vysilgdiif ydlkdpfdaa gyyhlalaaa mdlgnkkaql kiytrlaviy
     1261 hnflvdrems lffyqkartf atelnvrrin lapdqcykss
//
LOCUS       XP_041343454             444 aa            linear   VRT 06-MAY-2021
DEFINITION  multiple epidermal growth factor-like domains protein 9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041343454
VERSION     XP_041343454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..444
                     /product="multiple epidermal growth factor-like domains
                     protein 9"
                     /calculated_mol_wt=44705
     Region          18..>150
                     /region_name="Chi1"
                     /note="Chitinase [Carbohydrate transport and metabolism];
                     COG3469"
                     /db_xref="CDD:442692"
     Region          113..>191
                     /region_name="rad23"
                     /note="UV excision repair protein Rad23; TIGR00601"
                     /db_xref="CDD:273167"
     Region          <198..230
                     /region_name="Ephrin_rec_like"
                     /note="Tyrosine-protein kinase ephrin type A/B
                     receptor-like; pfam07699"
                     /db_xref="CDD:429604"
     Region          212..>308
                     /region_name="TNFRSF"
                     /note="Tumor necrosis factor receptor superfamily
                     (TNFRSF); cl22855"
                     /db_xref="CDD:473981"
     Region          235..267
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276900"
     CDS             1..444
                     /gene="LOC121364311"
                     /coded_by="XM_041487520.1:260..1594"
                     /db_xref="GeneID:121364311"
ORIGIN      
        1 msawlcpllw tltmvcltgi algqtastef sitstpapps atstevpias ttalpsaapa
       61 tasappaapa tlsaaltptt aspaaptaap sadpstttpa qtlpsstgtv ptsgsratsp
      121 assaltatps sapasppgvt tspglpssal ppstpqpsnc srvnvtacvp cppgtvptqg
      181 tlscsccagg acigpgacsp cppghyqpqg gqpsclpcpq gsytsfprst vclscppghf
      241 anesgaaacr acergyfssk qnaafclpcq pgsfcnttsc saclscpggq eapreasegc
      301 esclpgtfkg psdnrckacs tgeyqlqrgk escdlcpenh ycpspdvnpv kcppdafcpr
      361 gsveptycme lflykagdsc qltpatvivl atfsaggilv vfliilrrrq ehgknslkwl
      421 llprgsgpas yggtehtepv yagw
//
LOCUS       XP_041343577             291 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041343577
VERSION     XP_041343577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487643.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 47% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=29653
     Region          <44..241
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..291
                     /gene="LOC121364378"
                     /coded_by="XM_041487643.1:1..876"
                     /db_xref="GeneID:121364378"
ORIGIN      
        1 meergvggsh gglssppeqr sdrgtpagpp apppsxpapg apvtpspaps sraprhapaa
       61 lrqaqpesgt rrpgkpssrr eqarprnsss sravsgagrd arafpagrra agpalpgvqp
      121 acpnaapcps lcspgprraf tcrggaergp gasgsrrrqr tpsrccrprv rragrsrdlp
      181 realrkpaaa avpaprggke ggrgpgrplr hpatglsapa dgaagsapyp saqraaripd
      241 rrsvglrsag gkglatisps skmqyvihvg shcffcaqhl qsmeprsplk t
//
LOCUS       XP_041343785             649 aa            linear   VRT 06-MAY-2021
DEFINITION  carboxypeptidase Z [Pyrgilauda ruficollis].
ACCESSION   XP_041343785
VERSION     XP_041343785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..649
                     /product="carboxypeptidase Z"
                     /calculated_mol_wt=73309
     Region          37..164
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Site            order(47,49..50,53..55)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143549"
     Region          184..498
                     /region_name="M14_CPZ"
                     /note="Peptidase M14 carboxypeptidase subfamily N/E-like;
                     Carboxypeptidase Z subgroup; cd03867"
                     /db_xref="CDD:349439"
     Site            order(245,248,310,319..320,377..378,384,388,443,447,449,
                     469)
                     /site_type="active"
                     /db_xref="CDD:349439"
     Region          502..578
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cd11308"
                     /db_xref="CDD:200604"
     CDS             1..649
                     /gene="CPZ"
                     /coded_by="XM_041487851.1:82..2031"
                     /db_xref="GeneID:121364497"
ORIGIN      
        1 mvlrlllllg gllrvtkpap hcetgqetlg qcqtvqkakc vdialssctd vaytqmvypn
       61 fldqksrevi eysseyllis vlhnllqgec npdlrllgcs vlapqcekdk vikpcrhvce
      121 nlkknclpaf daidmawpyf ldcdrffage eegcfdplak lrgevdaeed lpsdlpatfi
      181 qfkhhsysqm vstlkktask cshiattysi grsfegkdlf viefstkpgh hellkpefky
      241 ignmhgnevv gkelliylaq ylcseyllgn priqtlinnt rihllpslnp dgyelaaeeg
      301 agyngwvigr qtaqnldlnr nfpdltseay rragirgarl dhipipqsyw wgkvapetka
      361 vmkwlrsipf vlsaslhgge lvvtypydys rhpmeekmfs ptpdekvfkm lakayadahp
      421 visdrselrc ggnfvkrggi ingaewysft ggmadfnylh tncfevtvev gcekfpleee
      481 lftiwhenkg allnymemvh rgikgivsdk fgnpiknari svrgiqhdvt taadgdywrl
      541 lppgtfiisa qapgysrvmk rvtiparmkq agrvdfvlrp aeawpnkllr rsmedaydpy
      601 dplelfdpha qhgqaeargg saagrekpww wsyfssldlh kplwllkqr
//
LOCUS       XP_041343904             142 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 128, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041343904
VERSION     XP_041343904.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041487970.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..142
                     /product="transmembrane protein 128"
     Region          23..141
                     /region_name="TMEM128"
                     /note="TMEM128 protein; pfam20479"
                     /db_xref="CDD:466628"
     CDS             1..142
                     /gene="TMEM128"
                     /coded_by="XM_041487970.1:<1..429"
                     /db_xref="GeneID:121364551"
ORIGIN      
        1 paqgggtaee stavektmrp lnrlnihsaf wilasiavty yfdflknike tmqtdswwlp
       61 cgtfllaacl svafycilyl ewycgiqdyd eqypalipit tatfiaaaic fnvalwpvws
      121 fltpvllfiq fmgvvmlvsl lg
//
LOCUS       XP_041344022             306 aa            linear   VRT 06-MAY-2021
DEFINITION  glucosamine-6-phosphate isomerase 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041344022
VERSION     XP_041344022.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488088.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="glucosamine-6-phosphate isomerase 2 isoform X1"
                     /calculated_mol_wt=34349
     Region          1..289
                     /region_name="nagB"
                     /note="glucosamine-6-phosphate deaminase; Provisional;
                     PRK00443"
                     /db_xref="CDD:179028"
     Site            order(41..44,71..72,137..138,143,145,172,239)
                     /site_type="active"
                     /db_xref="CDD:238693"
     Site            order(150,152..153,161,247..253,261..263)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238693"
     Site            order(151..152,158..161)
                     /site_type="active"
                     /note="allosteric site [active]"
                     /db_xref="CDD:238693"
     Site            order(163,166..176,180..182)
                     /site_type="active"
                     /note="active site lid [active]"
                     /db_xref="CDD:238693"
     Site            order(168,237,241,272,275..278)
                     /site_type="other"
                     /note="hexamer (dimer of trimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238693"
     CDS             1..306
                     /gene="GNPDA2"
                     /coded_by="XM_041488088.1:172..1092"
                     /db_xref="GeneID:121364639"
ORIGIN      
        1 mrlviledyd qasewaakyi cnriiqfkps qgryftlglp tgstplgcyk klieyhkngd
       61 lsfkyvktfn mdeyvglprn hpesyhsymw nnffkhidid pnnahildgn apdlqaecda
      121 fekkieeagg idlfvggigp dghiafnepg sslssrtrlk tlamdtilan akyfdgdlsk
      181 vptmaltvgv gtvmdarevr thlvlvacvf srlvgidtgi esketfvlqv militgahka
      241 falykaieeg vnhmwtvsaf qqhprtifvc dedatlelrv ktvkyfkglm hvhnklvdpl
      301 ysmken
//
LOCUS       XP_041344109             275 aa            linear   VRT 06-MAY-2021
DEFINITION  glucosamine-6-phosphate isomerase 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041344109
VERSION     XP_041344109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="glucosamine-6-phosphate isomerase 2 isoform X2"
                     /calculated_mol_wt=30936
     Region          1..258
                     /region_name="nagB"
                     /note="glucosamine-6-phosphate deaminase; Provisional;
                     PRK00443"
                     /db_xref="CDD:179028"
     Site            order(41..44,71..72,137..138,143,145,172,208)
                     /site_type="active"
                     /db_xref="CDD:238693"
     Site            order(150,152..153,161,216..222,230..232)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238693"
     Site            order(151..152,158..161)
                     /site_type="active"
                     /note="allosteric site [active]"
                     /db_xref="CDD:238693"
     Site            order(163,166..176,180..182)
                     /site_type="active"
                     /note="active site lid [active]"
                     /db_xref="CDD:238693"
     Site            order(168,206,210,241,244..247)
                     /site_type="other"
                     /note="hexamer (dimer of trimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238693"
     CDS             1..275
                     /gene="GNPDA2"
                     /coded_by="XM_041488175.1:1456..2283"
                     /db_xref="GeneID:121364639"
ORIGIN      
        1 mrlviledyd qasewaakyi cnriiqfkps qgryftlglp tgstplgcyk klieyhkngd
       61 lsfkyvktfn mdeyvglprn hpesyhsymw nnffkhidid pnnahildgn apdlqaecda
      121 fekkieeagg idlfvggigp dghiafnepg sslssrtrlk tlamdtilan akyfdgdlsk
      181 vptmaltvgv gtvmdarevm ilitgahkaf alykaieegv nhmwtvsafq qhprtifvcd
      241 edatlelrvk tvkyfkglmh vhnklvdply smken
//
LOCUS       XP_041344195             241 aa            linear   VRT 06-MAY-2021
DEFINITION  glucosamine-6-phosphate isomerase 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041344195
VERSION     XP_041344195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..241
                     /product="glucosamine-6-phosphate isomerase 2 isoform X3"
                     /calculated_mol_wt=26964
     Region          1..219
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     Site            order(116,118..119,127,182..188,196..198)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238693"
     Site            order(117..118,124..127)
                     /site_type="active"
                     /note="allosteric site [active]"
                     /db_xref="CDD:238693"
     Site            order(129,132..142,146..148)
                     /site_type="active"
                     /note="active site lid [active]"
                     /db_xref="CDD:238693"
     Site            order(134,172,176,207,210..213)
                     /site_type="other"
                     /note="hexamer (dimer of trimers) interface [polypeptide
                     binding]"
                     /db_xref="CDD:238693"
     CDS             1..241
                     /gene="GNPDA2"
                     /coded_by="XM_041488261.1:1456..2181"
                     /db_xref="GeneID:121364639"
ORIGIN      
        1 mrlviledyd qasewaakyi cnriiqfkps qgryftlglp tglprnhpes yhsymwnnff
       61 khididpnna hildgnapdl qaecdafekk ieeaggidlf vggigpdghi afnepgssls
      121 srtrlktlam dtilanakyf dgdlskvptm altvgvgtvm darevmilit gahkafalyk
      181 aieegvnhmw tvsafqqhpr tifvcdedat lelrvktvky fkglmhvhnk lvdplysmke
      241 n
//
LOCUS       XP_041344328             191 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoH [Pyrgilauda ruficollis].
ACCESSION   XP_041344328
VERSION     XP_041344328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="rho-related GTP-binding protein RhoH"
                     /calculated_mol_wt=21204
     Region          5..169
                     /region_name="Rho"
                     /note="Ras homology family (Rho) of small guanosine
                     triphosphatases (GTPases); cd00157"
                     /db_xref="CDD:206641"
     Site            order(6,36..37,39..40,42,44,53,57..62,68,71)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            11..18
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206641"
     Site            order(14..19,36,58..59,117,119,153..154)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206641"
     Site            order(35,37..38,62,68,71)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            order(36..37,60,68,70..71)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            36
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206641"
     Site            37..41
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206641"
     Site            order(38,68,71)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206641"
     Site            58..61
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206641"
     Site            order(60..62,68..71,76..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206641"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206641"
     Site            152..154
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206641"
     CDS             1..191
                     /gene="RHOH"
                     /coded_by="XM_041488394.1:434..1009"
                     /db_xref="GeneID:121364791"
ORIGIN      
        1 mldsvkcvlv gdsavgktsl lvrftsetfp ddyrptvyen tgvdvfmdgv qislglwdts
       61 gsdafkgirp lsyqqadvvl mcysvanhns flnlrnkwis eirshlprip vlvvatqtdq
      121 rdmgpysssc ispvdgkrla qdvrakgyle csalsnrgvq qvfecavrta vnqakrqnrr
      181 klfsinecki f
//
LOCUS       XP_041344461             191 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoH [Pyrgilauda ruficollis].
ACCESSION   XP_041344461
VERSION     XP_041344461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="rho-related GTP-binding protein RhoH"
                     /calculated_mol_wt=21204
     Region          5..169
                     /region_name="Rho"
                     /note="Ras homology family (Rho) of small guanosine
                     triphosphatases (GTPases); cd00157"
                     /db_xref="CDD:206641"
     Site            order(6,36..37,39..40,42,44,53,57..62,68,71)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            11..18
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206641"
     Site            order(14..19,36,58..59,117,119,153..154)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206641"
     Site            order(35,37..38,62,68,71)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            order(36..37,60,68,70..71)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            36
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206641"
     Site            37..41
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206641"
     Site            order(38,68,71)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206641"
     Site            58..61
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206641"
     Site            order(60..62,68..71,76..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206641"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206641"
     Site            152..154
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206641"
     CDS             1..191
                     /gene="RHOH"
                     /coded_by="XM_041488527.1:312..887"
                     /db_xref="GeneID:121364791"
ORIGIN      
        1 mldsvkcvlv gdsavgktsl lvrftsetfp ddyrptvyen tgvdvfmdgv qislglwdts
       61 gsdafkgirp lsyqqadvvl mcysvanhns flnlrnkwis eirshlprip vlvvatqtdq
      121 rdmgpysssc ispvdgkrla qdvrakgyle csalsnrgvq qvfecavrta vnqakrqnrr
      181 klfsinecki f
//
LOCUS       XP_041344546             191 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoH [Pyrgilauda ruficollis].
ACCESSION   XP_041344546
VERSION     XP_041344546.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488612.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="rho-related GTP-binding protein RhoH"
                     /calculated_mol_wt=21204
     Region          5..169
                     /region_name="Rho"
                     /note="Ras homology family (Rho) of small guanosine
                     triphosphatases (GTPases); cd00157"
                     /db_xref="CDD:206641"
     Site            order(6,36..37,39..40,42,44,53,57..62,68,71)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            11..18
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206641"
     Site            order(14..19,36,58..59,117,119,153..154)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206641"
     Site            order(35,37..38,62,68,71)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            order(36..37,60,68,70..71)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206641"
     Site            36
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206641"
     Site            37..41
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206641"
     Site            order(38,68,71)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206641"
     Site            58..61
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206641"
     Site            order(60..62,68..71,76..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206641"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206641"
     Site            152..154
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206641"
     CDS             1..191
                     /gene="RHOH"
                     /coded_by="XM_041488612.1:241..816"
                     /db_xref="GeneID:121364791"
ORIGIN      
        1 mldsvkcvlv gdsavgktsl lvrftsetfp ddyrptvyen tgvdvfmdgv qislglwdts
       61 gsdafkgirp lsyqqadvvl mcysvanhns flnlrnkwis eirshlprip vlvvatqtdq
      121 rdmgpysssc ispvdgkrla qdvrakgyle csalsnrgvq qvfecavrta vnqakrqnrr
      181 klfsinecki f
//
LOCUS       XP_041344681             701 aa            linear   VRT 06-MAY-2021
DEFINITION  PGAP2-interacting protein [Pyrgilauda ruficollis].
ACCESSION   XP_041344681
VERSION     XP_041344681.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488747.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..701
                     /product="PGAP2-interacting protein"
                     /calculated_mol_wt=78593
     Region          <445..601
                     /region_name="YafD"
                     /note="Uncharacterized conserved protein YafD,
                     endonuclease/exonuclease/phosphatase (EEP) superfamily
                     [General function prediction only]; COG3021"
                     /db_xref="CDD:442257"
     Region          <506..>579
                     /region_name="ElsH"
                     /note="Metal-dependent hydrolase,
                     endonuclease/exonuclease/phosphatase family [General
                     function prediction only]; COG3568"
                     /db_xref="CDD:442789"
     CDS             1..701
                     /gene="CWH43"
                     /coded_by="XM_041488747.1:90..2195"
                     /db_xref="GeneID:121364937"
ORIGIN      
        1 mfplwkdvls esllgyisws lyhalppmiy yfplqtlalt glevfavaff spifltidpf
       61 wrlanneyvl aflrltmvgs lasyhapnas irllilaagv sssllvqtvt wwsgnsvqrf
      121 iriwgfmlgk imllvlriwy tslnpvwssq vantviltig fvaaverihs ggdkrkqetn
      181 ktgnvireaa shphwflsgi afgslifltv wifgevslis rwavsghpht gpdpnpyggt
      241 vllglahglm lsfwswssii sfalfliglt ssagllylht wsaavagnil gvfsmcvwpq
      301 laarfvsclh pgkamstamf ayvlelffcv wctaykfvpg gvyiresshl llgfimlcig
      361 vdfltgpkkd lssvfevksn qkplfkrskk yiklllwllv gvgllglglr yrtyqkklgq
      421 gvpkrdfsam iwpfrfgfdn egwsnlegsa nllnqteadf itiiesdask pfignhdptm
      481 wlgerlgfyt dfgpstrdht wgimalsryp ivksthhllp spegeiapai sltvnftgkl
      541 vdfvvahfgn eeedldrklq aiavsnllkt sskqvvflgy itsapgsrdy telikngnmq
      601 didstdrdrw csyimyrgvi rlgyarisha glsdsevqma kfripddvds yvdndrivtd
      661 psqvpedihf nprfgsykdg hnyvpihhfh mstpkyfkrt n
//
LOCUS       XP_041344807             114 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic beta-glucosidase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041344807
VERSION     XP_041344807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041488873.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..114
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..114
                     /product="cytosolic beta-glucosidase-like"
                     /calculated_mol_wt=12577
     Region          13..>108
                     /region_name="BglB"
                     /note="Beta-glucosidase/6-phospho-beta-glucosidase/beta-
                     galactosidase [Carbohydrate transport and metabolism];
                     COG2723"
                     /db_xref="CDD:442035"
     CDS             1..114
                     /gene="LOC121365010"
                     /coded_by="XM_041488873.1:1..345"
                     /db_xref="GeneID:121365010"
ORIGIN      
        1 mrfgnklpvl ediafpvgfa wgaataayqi eegwnadgkg pnvwdifthq ggdrvfknqt
       61 gdvacgrytl weedlkcikq lglthycfsl swsrllpdgt tgfinqkgck vect
//
LOCUS       XP_041344941             694 aa            linear   VRT 06-MAY-2021
DEFINITION  cilia- and flagella-associated protein 99 [Pyrgilauda ruficollis].
ACCESSION   XP_041344941
VERSION     XP_041344941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489007.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="cilia- and flagella-associated protein 99"
                     /calculated_mol_wt=80670
     Region          <259..622
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..694
                     /gene="CFAP99"
                     /coded_by="XM_041489007.1:48..2132"
                     /db_xref="GeneID:121365069"
ORIGIN      
        1 mgsagnsreq erqrrgqprt gaaaavqgrc grfsmvkmvs hrelialivq qlnkfnpenq
       61 svedflnesa mmlqtlnvte ekfvldtlag cteyksildv vvnafyvqdg ryclisernl
      121 yivicylatf qleeiglqhf srivksldta kmqqflrfff ndlylntwik dewshfydse
      181 yvketlidpl lrwqpkvqql iekltdklsn rtttvktsrv tqpkefnltv pkaraippps
      241 paplsvlpkr qpvppsiykp pkerkqleei ktkniqkakd llleantnqf rcatikpekr
      301 enihdsmesk pvfkaqkiqs kidnipikln taailregal yqrkleeelk rvenlqqgvg
      361 dpseflewqk qmrgkdleeq laeiecrrlq gklsyeeavl ahqnvtqenk kkaallreek
      421 aelmdlyaek rlqeqkemke lveqvmeghk nvkqvkakiq eykqqivqqv ceeseellrq
      481 aleekeennr kryeliqqir aiesapsirh kfvdltetgg hglfgemsiv elrerlallk
      541 eaqkaaeeek rdqiihekqa keqlildkld qisqfraelg raaalkqeek kksqsgerpm
      601 kderilnlqk kivekamerk kqagllkisp qktrivsskd sfqwnhwkel eesrerqfri
      661 lqhgfmdrea vqkreliaaa rsgakacilr sdlk
//
LOCUS       XP_041345063             689 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat LGI family member 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041345063
VERSION     XP_041345063.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489129.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..689
                     /product="leucine-rich repeat LGI family member 2"
                     /calculated_mol_wt=77919
     Region          <90..>157
                     /region_name="Herpes_UL43"
                     /note="Herpesvirus UL43 protein; cl27973"
                     /db_xref="CDD:332794"
     Region          254..313
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          279..302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          284..>359
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          303..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          363..403
                     /region_name="EPTP"
                     /note="EPTP domain; pfam03736"
                     /db_xref="CDD:461033"
     Region          410..448
                     /region_name="EPTP"
                     /note="EPTP domain; pfam03736"
                     /db_xref="CDD:461033"
     Region          455..500
                     /region_name="EPTP"
                     /note="EPTP domain; pfam03736"
                     /db_xref="CDD:461033"
     Region          504..545
                     /region_name="EPTP"
                     /note="EPTP domain; pfam03736"
                     /db_xref="CDD:461033"
     Region          551..592
                     /region_name="EPTP"
                     /note="EPTP domain; pfam03736"
                     /db_xref="CDD:461033"
     Region          596..636
                     /region_name="EPTP"
                     /note="EPTP domain; pfam03736"
                     /db_xref="CDD:461033"
     Region          643..682
                     /region_name="EPTP"
                     /note="EPTP domain; pfam03736"
                     /db_xref="CDD:461033"
     CDS             1..689
                     /gene="LGI2"
                     /coded_by="XM_041489129.1:1..2070"
                     /db_xref="GeneID:121365126"
ORIGIN      
        1 mepygtpqea vlepvgsgeg srhklrhwkw trefrawpvq tkkrgldtke segyksykka
       61 inptpslpfs glntpsslsl ssydlcskpf sghapahqcf prlpgvaslr syqrgprtps
      121 asrgafgfcp agrrrarcpg rasprparrd ppsasrrrsg ggaalmsgrg rrrgwprprc
      181 gppcscwres alcvgaagap rslpaglgsl slvngtfsev kdrmfshlps lqllllnsns
      241 ftvirddafa glfhleylfi egnkietisr nafrglrdlt hlslannhlk alprdvfsdl
      301 dslieldlrg nkfecdckak wlflwlkmtn stvsdvlcig paeyqdkkln dvtsfdyect
      361 ttdfvvhqil pyhsvsvdtf nskndvfvai aqpsmencmv lewdhiemnf rsydnitgqs
      421 ivgckavlvg dqvfvvvaql fggshiykfd eswtkfvkfq dieesriskp ndielfeids
      481 emffviadss kaglstvykw nnkgfysyqs lhewfrdtda efldidgksy lilssrsqvp
      541 iilqwnkask kfvphgeipn medvlavksf riqddlyitl trfigdsrvm kwnskqfvei
      601 qalpsrgamt lqpfsfknny ylalgsdytf sqiyqwdgek kifrlfkeiy vqaprsftav
      661 stdrrdfffa ssfkgntqif ehiiidlsl
//
LOCUS       XP_041345300              92 aa            linear   VRT 06-MAY-2021
DEFINITION  neuropeptide-like protein C4orf48 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041345300
VERSION     XP_041345300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..92
                     /product="neuropeptide-like protein C4orf48 homolog"
                     /calculated_mol_wt=9822
     Region          30..90
                     /region_name="Neuropep_like"
                     /note="Neuropeptide-like; pfam15161"
                     /db_xref="CDD:317565"
     CDS             1..92
                     /gene="LOC121365273"
                     /coded_by="XM_041489366.1:115..393"
                     /db_xref="GeneID:121365273"
ORIGIN      
        1 malpavrsea rvgmlllsvl sllsarlvga gqdsgsaipa esrpcvdcha fefmqralqd
       61 lkqtafglda rtetlllrae krglcdcfha ih
//
LOCUS       XP_041345421             702 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041345421
VERSION     XP_041345421.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489487.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..702
                     /product="peroxisomal acyl-coenzyme A oxidase 3 isoform
                     X1"
                     /calculated_mol_wt=79045
     Region          23..674
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(131,159,161,199,201,452..454,456,458)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..702
                     /gene="ACOX3"
                     /coded_by="XM_041489487.1:294..2402"
                     /db_xref="GeneID:121365347"
ORIGIN      
        1 mnqkeihgsq nsrddlladf pkgplsryrk kasfnwkema lftdgedtiq lknrifssle
       61 ndplfahhpg edlcrekyqe ltflrckrlf eyefltqqem menplrlfnm vlcvgmydws
      121 lclkfflhsg tfagsimsas krfahilkqt ysmeifgcfa ltelshgsnt kglrttatfd
      181 psaqefvint pdfeaakfwv gnmgkhatha vlyaqlytpd gqcqglhpfi vqirdtktll
      241 pmpgvmvgdi gkkiglngld ngfamfhnvr ipkenilnia gdvtaegkys ssikevkerf
      301 saalgslssg riiitglstt nlklalaiai rfsaarcqfg paedeeipvl eyqtqqwrll
      361 pylaaayald yfskslfgnf veyfagvltk qrnqrqadlg reihalsass kslaswtaqq
      421 aaqecreacg ghgylamnrl geirndndpn ctyegdnnvl lqqtsnylls wmncikdkap
      481 fesplgtinf lqdyhhilgw kftaisvedc mdssvplaay kwlvcyllre sdlkmnkekq
      541 agqsdfeakn ncqvyycrsl aiafieqtal qryhdythdp svpaalqpvl rdlsalyglw
      601 slskhlavly qggyasgeqp gkfiqdailk lcyrlkddav alvdvfapsd filnstigka
      661 sgelyknmwg eilqgnkaln rpswwaefcm nkpvigrlrs rl
//
LOCUS       XP_041345506             702 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal acyl-coenzyme A oxidase 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041345506
VERSION     XP_041345506.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489572.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..702
                     /product="peroxisomal acyl-coenzyme A oxidase 3 isoform
                     X1"
                     /calculated_mol_wt=79045
     Region          23..674
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(131,159,161,199,201,452..454,456,458)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..702
                     /gene="ACOX3"
                     /coded_by="XM_041489572.1:130..2238"
                     /db_xref="GeneID:121365347"
ORIGIN      
        1 mnqkeihgsq nsrddlladf pkgplsryrk kasfnwkema lftdgedtiq lknrifssle
       61 ndplfahhpg edlcrekyqe ltflrckrlf eyefltqqem menplrlfnm vlcvgmydws
      121 lclkfflhsg tfagsimsas krfahilkqt ysmeifgcfa ltelshgsnt kglrttatfd
      181 psaqefvint pdfeaakfwv gnmgkhatha vlyaqlytpd gqcqglhpfi vqirdtktll
      241 pmpgvmvgdi gkkiglngld ngfamfhnvr ipkenilnia gdvtaegkys ssikevkerf
      301 saalgslssg riiitglstt nlklalaiai rfsaarcqfg paedeeipvl eyqtqqwrll
      361 pylaaayald yfskslfgnf veyfagvltk qrnqrqadlg reihalsass kslaswtaqq
      421 aaqecreacg ghgylamnrl geirndndpn ctyegdnnvl lqqtsnylls wmncikdkap
      481 fesplgtinf lqdyhhilgw kftaisvedc mdssvplaay kwlvcyllre sdlkmnkekq
      541 agqsdfeakn ncqvyycrsl aiafieqtal qryhdythdp svpaalqpvl rdlsalyglw
      601 slskhlavly qggyasgeqp gkfiqdailk lcyrlkddav alvdvfapsd filnstigka
      661 sgelyknmwg eilqgnkaln rpswwaefcm nkpvigrlrs rl
//
LOCUS       XP_041345589             603 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal acyl-coenzyme A oxidase 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041345589
VERSION     XP_041345589.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489655.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..603
                     /product="peroxisomal acyl-coenzyme A oxidase 3 isoform
                     X2"
                     /calculated_mol_wt=67231
     Region          1..575
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(32,60,62,100,102,353..355,357,359)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..603
                     /gene="ACOX3"
                     /coded_by="XM_041489655.1:275..2086"
                     /db_xref="GeneID:121365347"
ORIGIN      
        1 mmenplrlfn mvlcvgmydw slclkfflhs gtfagsimsa skrfahilkq tysmeifgcf
       61 altelshgsn tkglrttatf dpsaqefvin tpdfeaakfw vgnmgkhath avlyaqlytp
      121 dgqcqglhpf ivqirdtktl lpmpgvmvgd igkkiglngl dngfamfhnv ripkenilni
      181 agdvtaegky sssikevker fsaalgslss griiitglst tnlklalaia irfsaarcqf
      241 gpaedeeipv leyqtqqwrl lpylaaayal dyfskslfgn fveyfagvlt kqrnqrqadl
      301 greihalsas skslaswtaq qaaqecreac gghgylamnr lgeirndndp nctyegdnnv
      361 llqqtsnyll swmncikdka pfesplgtin flqdyhhilg wkftaisved cmdssvplaa
      421 ykwlvcyllr esdlkmnkek qagqsdfeak nncqvyycrs laiafieqta lqryhdythd
      481 psvpaalqpv lrdlsalygl wslskhlavl yqggyasgeq pgkfiqdail klcyrlkdda
      541 valvdvfaps dfilnstigk asgelyknmw geilqgnkal nrpswwaefc mnkpvigrlr
      601 srl
//
LOCUS       XP_041345719             673 aa            linear   VRT 06-MAY-2021
DEFINITION  probable tRNA (uracil-O(2)-)-methyltransferase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041345719
VERSION     XP_041345719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..673
                     /product="probable tRNA (uracil-O(2)-)-methyltransferase"
                     /calculated_mol_wt=75416
     Region          225..336
                     /region_name="AdoMet_MTase"
                     /note="Predicted AdoMet-dependent methyltransferase;
                     pfam07757"
                     /db_xref="CDD:462255"
     CDS             1..673
                     /gene="TRMT44"
                     /coded_by="XM_041489785.1:39..2060"
                     /db_xref="GeneID:121365499"
ORIGIN      
        1 mgpvgaaavr dpggaalprg fwaavrvwle kpqvanrrls gaavqaegtv plgesgdipp
       61 sfatagaggg ggeqegraag aaelgrlwre vrgqlalppp ltawggpgel ravlrtllpr
      121 grpaappare lvvqdvyngt vtflpleenn egkylvkkcn iyqiqlkhvk deewsvsvva
      181 pfpedwfsdg ivypklawlg nellsklakw sveqkpsgfk ntlslisvak yskvyqdlke
      241 kykemvkvwp evtdpekfvy edvaiatyll ilweeerkek altkkqsfvd lgcgngllvh
      301 ilnneghpgr gidvrrrkiw dmygpethle eatiipgdsh lfpdtdwlig nhsdeltpwi
      361 pviaarssys ccyfvlpccf fdfhgkysrr qskktqyrey ldfvaqvgfv cgfyveedcl
      421 ripstkrvsf igksrtypaa eralidrqit qfinsrrnca vatcdrrigf nhehhcgglc
      481 keagsepped etqtagtiwm pgfqprekve qvrncaslpr dfvdevvlsv anlllnaapl
      541 kscsdkqggn mntwnqgesl slrevaehld keilkklkse ygglqtllkn nhqvfevlng
      601 rvhirdwrke kppsktkpev krrlsaeafk trlcwffihh pdgcslpsea cpyahgteel
      661 rqsqmikkkk hiq
//
LOCUS       XP_041345845             981 aa            linear   VRT 06-MAY-2021
DEFINITION  death domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041345845
VERSION     XP_041345845.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041489911.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..981
                     /product="death domain-containing protein 1"
                     /calculated_mol_wt=111113
     Region          889..975
                     /region_name="Death_PIDD"
                     /note="Death Domain of p53-induced protein with a death
                     domain; cd08779"
                     /db_xref="CDD:260049"
     Site            order(897..898,900,903,928..931,934)
                     /site_type="other"
                     /note="Type III interaction site [polypeptide binding]"
                     /db_xref="CDD:260049"
     Site            order(903,907,910..912,915..916,923,961,963..966,969)
                     /site_type="other"
                     /note="PIDD-RAIDD interaction site [polypeptide binding]"
                     /db_xref="CDD:260049"
     Site            order(903,907,910..911,915..916,923,961..962)
                     /site_type="other"
                     /note="Type I interaction site [polypeptide binding]"
                     /db_xref="CDD:260049"
     Site            order(963..966,969)
                     /site_type="other"
                     /note="Type II interaction site [polypeptide binding]"
                     /db_xref="CDD:260049"
     CDS             1..981
                     /gene="DTHD1"
                     /coded_by="XM_041489911.1:1..2946"
                     /db_xref="GeneID:121365568"
ORIGIN      
        1 mdiagskitp agksgqvlgk isylnflard vllksdldkg gleeyvlglt slpkdlsrsl
       61 sqqlenvtei iqdtchllsa lhdkhkeltg spafiekcnw fgffvfvffs sefngiidyl
      121 qkvkeylint isylqeaenk fyaascrqdg dsqnqtgena sggtdvhcse geakdsvqas
      181 ssssqqfqrt pflnktesqn vnqthtseik tvgkipslge nkfaqeqdts respmrkedg
      241 ehqllivsft ekkecngkdk lqggssvter ppeldafpda ltsseedils gtlkniydrs
      301 itnrceqekk evvrdnlkgl esedhkltek mednkikknd eifrnylspf tssaqtydlp
      361 dvnpsgsdae evqksrywlk keflvkgsgk npqeiacfik apatvlenlk cnilndtssl
      421 vvddseelvs nvisiecydn eklifpinia ipftscfrgn yreimvkvtd tnfqsnyltp
      481 islqgyqgnh kesfaevkly hlgvfsvlsc lkketftvpk vgllkklnvd srisfcyqpe
      541 afsspapmql kiqpiepslv salkarhdmy hsvistsalv hvqhpsaqpf nssvtitlpc
      601 ppnpdkkrqg deteharais atvksvaaay hpwavstsvr ksgdnlcdtl kllghgnkee
      661 gwkvfddvii qnaqnglvsf elnehlerfv virlafllen rhlllfaqal eealhstman
      721 vilyqkrenp ykivvllsas reltnelqnl heegyfgppe ptqqfplrqg eqihfrftgn
      781 isasengedf rkvyrlifhs qrqprlelqi kevdefgnhs sphykgtavf ykipremipk
      841 kweqtlpyde yqhqsplckl altlpkhekl ihrprstkii lsdssealwd kllfwlaeel
      901 aedntslfal clpvrrsmlq lvrlkcpdnl thqiyellcc wkktlpksad kqqllshylq
      961 ksgrsdlsee lrlkwqnkvf t
//
LOCUS       XP_041345963             421 aa            linear   VRT 06-MAY-2021
DEFINITION  toll-like receptor 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041345963
VERSION     XP_041345963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490029.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..421
                     /product="toll-like receptor 10"
                     /calculated_mol_wt=48464
     Region          33..49
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <35..270
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          50..73
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          51..108
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          74..97
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          98..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          119..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          165..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..421
                     /gene="LOC121365636"
                     /coded_by="XM_041490029.1:224..1489"
                     /db_xref="GeneID:121365636"
ORIGIN      
        1 mrfltniyvf tcaftftlwn niqptvedef ianysnslla nvpknipvct qvldlshnri
       61 sglstsefih lsdlqvlnls hnlitvldfs vfifnenley ldlshnnisk vfcltlaylr
      121 hldlsfnkft alpicqefgn mfhleylgls atmirmsdfr yikhlqlhtv flnlgnfsly
      181 eprsltvltt rnlhiafaan qnfifsllyd gmstsenlki vnlrytlsyk dfpspslmll
      241 kkiktttltl davdlqwaii lqiflliwys pvehltvrnl tfrgpleept eyaflpllss
      301 veqlisldgt mkaltlehvr nkvyyfnqei lyrqfsemni anltiadaym phmlcpnrts
      361 sfqylnfshn altdelfqnc gtlmdlklli vpcsgltsgq pltltcqypv kqmsrrvmlh
      421 l
//
LOCUS       XP_041346084             238 aa            linear   VRT 06-MAY-2021
DEFINITION  toll-like receptor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041346084
VERSION     XP_041346084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490150.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="toll-like receptor 6"
                     /calculated_mol_wt=27483
     CDS             1..238
                     /gene="LOC121365708"
                     /coded_by="XM_041490150.1:87..803"
                     /db_xref="GeneID:121365708"
ORIGIN      
        1 mtlntsflrh vflykclfal tlgdhvslsv edelftsvsn nfpeddsnqk ntslplqytk
       61 shqpswvviq ntteslslse ikrndakkli allsnfrqgs rlqnltlanv svewndlmei
      121 fqtvwhssve yfntynvtql sdvesydfdy sgtsmkaltm kkmiitdmyf tqddlykifa
      181 dmniedmtia dsemihmlcp sykspfryln flkndltdfl fqkcdnllql etlipvlg
//
LOCUS       XP_041346111             675 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-dependent phosphate transport protein 2B [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346111
VERSION     XP_041346111.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490177.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..675
                     /product="sodium-dependent phosphate transport protein 2B"
                     /calculated_mol_wt=73654
     Region          103..602
                     /region_name="2a58"
                     /note="Phosphate:Na+ Symporter (PNaS) Family; TIGR01013"
                     /db_xref="CDD:162157"
     CDS             1..675
                     /gene="SLC34A2"
                     /coded_by="XM_041490177.1:10..2037"
                     /db_xref="GeneID:121365739"
ORIGIN      
        1 mapwpevekp etnnyigdss kqnqnmagke genhkgnvas lgnkgeiqpa fstvalidet
       61 rpeeedpwal pelqdtgvkw seldtkgkvi rvlygigkfi mllgllymfv csldvlssaf
      121 qlvggkaagd ifkddsvlsn pvaglvigvl vtvmvqssst sssiivsmvs stlltvraai
      181 piimganigt svtntivalm qagdrnefrr afagatihdf fnwlavfall pievitgyly
      241 hltnvivesf hlesgedape llkvitdpft kliieldksv inaiatndes aknkslvkiw
      301 cvtesnvtlq nvtippsenc tspdfcwteg nvtwtlknit etdyiskcqh ifvnsdlpdl
      361 aiglillals llvlcsclim ivkllnsvlk gqvasvikkt intdfpfpft wlagylamla
      421 gagmtfvvqs ssvftsaitp lvgigvisie rsypltlgan igttttaila alaspgstlk
      481 yslqialchf ffnvsgiilf ypipytrlpi rmsktlgnit aqyrwfaify lllcffllpl
      541 fvfalslagw avllgvclpl fvlfiavvvi nvmqkrrphs lpeklqnwdf lpvwmhslep
      601 wdniimssla fcgkhccgfc kcckvnaeee gakdkqlktm evyentmama deerggrrap
      661 avacvdktgt nntal
//
LOCUS       XP_041346121             686 aa            linear   VRT 06-MAY-2021
DEFINITION  putative methyltransferase NSUN7 [Pyrgilauda ruficollis].
ACCESSION   XP_041346121
VERSION     XP_041346121.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490187.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..686
                     /product="putative methyltransferase NSUN7"
                     /calculated_mol_wt=76381
     Region          <208..461
                     /region_name="RsmB"
                     /note="16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF
                     family [Translation, ribosomal structure and biogenesis];
                     COG0144"
                     /db_xref="CDD:439914"
     Region          553..>668
                     /region_name="PHA03269"
                     /note="envelope glycoprotein C; Provisional"
                     /db_xref="CDD:165527"
     CDS             1..686
                     /gene="NSUN7"
                     /coded_by="XM_041490187.1:1..2061"
                     /db_xref="GeneID:121365748"
ORIGIN      
        1 mpdsesnlvs shvdvinrts vlsemnisde krsvekravt qigkdgypds iyinaakifq
       61 giriekstgr ilvqygnase spmmafkdeh srrvsyelaf ralkyqdlle emlldskvyp
      121 cysipdelts llvvmlcdlq drkfqkrkvf aeeelvaevq eighylyryr tklaaalarc
      181 rikydalsie yfvpetiskq eqrtsavplc fwintfkitl edvirdlemk gftkvesvsd
      241 fdhytyavdq hchdvlvfps slreellnld lfadcklllq dksrslavhs ahallseggd
      301 iimahtgshl tiahmsvltn dskpsifvcg vkslakeeel rnnfshmgce niwllhedft
      361 elqptdprle kakvilllpq cselgagnpm elilsehsda gllrdlfqgf vsedklrila
      421 erqlneliha lkfnkvqaiv yctcsvypee nelvvkkale sgvegdkrpy rlipsvfstc
      481 snsesstemf fkiepseiss gcflavlere kkvsakdila saaakalldg iveekpkeev
      541 kkpkvkqrrr kaaasdskpk aakdlhhhtg anakaevpvs kaaskiqekh vcptkagsdt
      601 pqktvkgkka asdtpqktvq gkkaasdtpq ktvqgkkaas ntqqknahpt kaasnvsvpk
      661 aasktrqkng prtdscvelk kpvnpd
//
LOCUS       XP_041346134             100 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C motif chemokine 3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041346134
VERSION     XP_041346134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490200.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..100
                     /product="C-C motif chemokine 3-like"
                     /calculated_mol_wt=10909
     Region          41..97
                     /region_name="Chemokine_CC"
                     /note="1 of 4 subgroup designations based on the
                     arrangement of the two N-terminal cysteine residues;
                     includes a number of secreted growth factors and
                     interferons involved in mitogenic, chemotactic, and
                     inflammatory activity; some members (e.g. 2HCC) contain
                     an...; cd00272"
                     /db_xref="CDD:238170"
     Site            order(41..45,47..54,64..65,87..97)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:238170"
     Site            order(43,45,58,60,65,70..72,80..82,88..89,92..93,96..97)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(43,45,62,64..65,71,79,81)
                     /site_type="other"
                     /note="dimer interface (P form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(43,71,80)
                     /site_type="active"
                     /note="putative receptor binding cleft [active]"
                     /db_xref="CDD:238170"
     Site            order(43..45,47..54)
                     /site_type="active"
                     /note="N-loop [active]"
                     /db_xref="CDD:238170"
     Site            order(45,58,60,70,72,80,82,88..89,92..93,96..97)
                     /site_type="other"
                     /note="dimer interface (I form) [polypeptide binding]"
                     /db_xref="CDD:238170"
     Site            order(47..49,52..54,76,78)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            order(60,67,85,87,90..91,94)
                     /site_type="other"
                     /note="putative glycosaminoglycan (GAG) binding site
                     [chemical binding]"
                     /db_xref="CDD:238170"
     Site            64..65
                     /site_type="other"
                     /note="30s-loop"
                     /db_xref="CDD:238170"
     Site            order(74,76)
                     /site_type="other"
                     /note="40s-loop"
                     /db_xref="CDD:238170"
     CDS             1..100
                     /gene="LOC121365757"
                     /coded_by="XM_041490200.1:77..379"
                     /db_xref="GeneID:121365757"
ORIGIN      
        1 mrvlaaalav lllvaicsla eadlrvsrsa psfknaessp ccfsyvsrpv arsvisfaym
       61 trrtcprpav vlitrkgtql cadpsaswvq kyledmklwk
//
LOCUS       XP_041346145             433 aa            linear   VRT 06-MAY-2021
DEFINITION  magnesium transporter NIPA3 [Pyrgilauda ruficollis].
ACCESSION   XP_041346145
VERSION     XP_041346145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490211.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..433
                     /product="magnesium transporter NIPA3"
                     /calculated_mol_wt=47321
     Region          94..383
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..433
                     /gene="NIPAL1"
                     /coded_by="XM_041490211.1:1..1302"
                     /db_xref="GeneID:121365764"
ORIGIN      
        1 mhqklqvlck dtkrseqsea ralpelglcr esfvllfllp gavlsfscrd scqawcqiin
       61 vseshsplls smegmgnetn wsismpsgsk yhlyiglala igssifigss filkkkgllk
      121 ladrgvtrag qggysylkew lwwagllsmg lgeaanfaay afapatlvtp lgalsvlisa
      181 ilssyflkek lnihgklgcv lsilgstvmv ihapeeeevt sldemerklq dpvfvtfavl
      241 ltvvalvliv vvapkrgqtn iliyilicsl igafsvssvk glgiaikqml qrkpayrhpl
      301 vyilvgvlvl svstqisyln kaldvfntsl vtpiyyvcft ttvvtcsiil fkewssmelg
      361 diigtlsgfc siiigifllh afkntnitws qlmstvakep slphrefets htllesmedp
      421 alayeednil fsq
//
LOCUS       XP_041346155             549 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase TXK-like [Pyrgilauda ruficollis].
ACCESSION   XP_041346155
VERSION     XP_041346155.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490221.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..549
                     /product="tyrosine-protein kinase TXK-like"
                     /calculated_mol_wt=62842
     Region          95..148
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(100,102,105,109,127..128,142,144..145)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212840"
     Region          152..257
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(166,185,211,213)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(212,239)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          275..527
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(286..289,292,294,306,308,336,352..355,399,403..404,
                     406,416..417)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..549
                     /gene="LOC121365772"
                     /coded_by="XM_041490221.1:1..1650"
                     /db_xref="GeneID:121365772"
ORIGIN      
        1 mhegtlqiwk lflftdhtfq svfcccccsv qeremrtkvh ldpdavlvtq ysvsqpdvsy
       61 esiwkcgnkr qlqfkdkplp plppeafedy tnkprvtalc dffargpldl plkkseeyii
      121 leqydplwwk ardrhgnegl ipsnyvtenk ksnletykwy crninrsqae lllrqkpteg
      181 afvvrdssrq glltlsmysr akgshngdil hyqikqnhlg qyyvaenylf ssvpelieyh
      241 qhnaaglitr lrhpvgsdgc tspettglny eewglnpsel lllkelgrgq fgvvylgkwk
      301 etikvaikti negamseddf ieeaklmmkl shpklvqlyg vcthhkplyv vtefmengcl
      361 lnylrqrrgk lgrgvllsmc qdvcegmeyl erngfihrdl aarnclvnve hvvkvsdfgm
      421 aryviddeyi sssgakfpvk wsspevfhfk kyssksdvws fgvlmwevft egkmpfetks
      481 naevvheisq gnrlyrphla shpvykvmys cwheqisqmg gptgppkhit ipppsgttsl
      541 apaqpptmf
//
LOCUS       XP_041346170            1245 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 66 [Pyrgilauda ruficollis].
ACCESSION   XP_041346170
VERSION     XP_041346170.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490236.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1245
                     /product="leucine-rich repeat-containing protein 66"
                     /calculated_mol_wt=139579
     Region          <46..>251
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          46..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          89..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..149
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          150..172
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          173..196
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          197..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..246
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1245
                     /gene="LRRC66"
                     /coded_by="XM_041490236.1:339..4076"
                     /db_xref="GeneID:121365778"
ORIGIN      
        1 mdnyhlhvia vvlyfnlpgs vgaksqqilp athrrsecrw dgqfllncsf tristipedt
       61 sqiavtadls ynniktfvcs dgrneewmlk hlnlsnnlis evtlttctnl pnletldlsg
      121 naihtltldm ptpapgseky sivdrllpal kvlsiernnl ntvprglgll qslqtvhmss
      181 naiqhidpkd fqncsqlkdi dlrnnkitki hpdvfrdlnk lqvvdlrena ltiplpqilv
      241 slnffqlevy lsknawifnc rlnafkhffh fvfdstrqkw slsynkfann sqkpllylss
      301 fhlncrdnvl lkratvptgn tsvltcnldn irgngvswwt pkgrisknhs lphmtldkmn
      361 nlviynaekt aeglylclfn ttkekyliyn ievkegvsaf lvrkardtvf rqketepnfa
      421 lavslsvlit flcafclgaf arpylerlwr lmrrnknsgs ehtysnqafs detlsressa
      481 skptnmqfnt licdknslrn trifpteast vyenvtgsrv hspnpkaeyq kqsnteinrk
      541 kmpafskvqt sidnndsini ydtelffvrt dyqksnkitp nskvrnnsgl lqseitkttp
      601 dsperkgvls htkprhtrkf mqgrqsseeq lclngnknip snvggfisps sfrrdadien
      661 lgiyetiens pttehdckri hsdekdasad ifgdsssaeg tpftmsdcss ladfeveqpg
      721 vsdnlpacqs lldeantdsg tekfvtppes pnstaelqqt gknedensay fettinygsd
      781 ttmqetasty tdkssghvsv sdpdtvssss qetpgtfdyf tnaestvqns isdslhnqst
      841 dfgnmvlkle pfpmydtekt seedelqlsl fprepqhslt fshtdqkenv psgstddhia
      901 knspekshge pdinaeltvq nsisdslhnq stdfgntvlk lepfptydte ktseedelql
      961 sllpresqhf lsfsdteqkg napagstdeh iarnspeknh seadttlrrn istsedngfv
     1021 fapidtglne vvkkppllhs sqesslqllp ehtaekhfif ltqqddllpq ekqacadkmq
     1081 ggsdeensdg ftelqdtsnr slpeetqsws ptavllhlhs sgktqseftt ddpfqldqsd
     1141 edpysfsipq gffdestpys scsfppkptg ntisestdss kmkdhttlae venhsattle
     1201 lqnssetlsq ksrtnsgqdq ffikkkrafd gfanilqsrr tnfns
//
LOCUS       XP_041346179             334 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-18 [Pyrgilauda ruficollis].
ACCESSION   XP_041346179
VERSION     XP_041346179.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490245.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="syntaxin-18"
                     /calculated_mol_wt=38247
     Region          4..95
                     /region_name="Syntaxin-18_N"
                     /note="SNARE-complex protein Syntaxin-18 N-terminus;
                     pfam10496"
                     /db_xref="CDD:463116"
     Region          245..303
                     /region_name="SNARE_syntaxin18"
                     /note="SNARE motif, subgroup Qa; cd15850"
                     /db_xref="CDD:277203"
     Site            order(246,248..249,251..256,258..260,262..263,265..267,
                     269..270,272..274,276..277,279..284,286..291,293..298,
                     300..302)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277203"
     Site            276
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277203"
     CDS             1..334
                     /gene="STX18"
                     /coded_by="XM_041490245.1:148..1152"
                     /db_xref="GeneID:121365787"
ORIGIN      
        1 mavditllfk asvktvktrn kalgvaatgd sardellkrg tarsksdfts rarevishig
       61 klkdfllqhr kdyinayshi mseyvrmtdt erdqidqdaq vfmrtcadai hqlrteahkg
      121 vqsaqvkehr tavldfiedy lkrvcklyse qrairvkrvi dkkrlsklep eqsnvskssl
      181 stekssqspl edseeklsae eskdrnlpda qsnlglwgdg rgedelspee iqmfeqenqr
      241 lvgemnnlfd evrqiegkvv eisrlqeift ekvlqqetdi dnihqlvvga tenikegned
      301 ireaiknnag frvwilfflv mcsfsllfld wydn
//
LOCUS       XP_041346191             185 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal vesicle trafficking-associated protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041346191
VERSION     XP_041346191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="neuronal vesicle trafficking-associated protein
                     1 isoform X1"
                     /calculated_mol_wt=20917
     Region          1..177
                     /region_name="Calcyon"
                     /note="D1 dopamine receptor-interacting protein (calcyon);
                     pfam06387"
                     /db_xref="CDD:461892"
     CDS             1..185
                     /gene="NSG1"
                     /coded_by="XM_041490257.1:212..769"
                     /db_xref="GeneID:121365796"
ORIGIN      
        1 mvklgnnfse kstkqplled gfdtiplitp ldvnqlqfpp pdkvvvktkt eyepdrkkgk
       61 frtpkiaeft isitegvser fkvtvlvlfa lafltcvvfl vvykvykydh tcpegfvfkn
      121 nqcipaglen yyseqdssar gkfytvinhy nlakqtitrs vspwmtvlse eklseqetea
      181 aeksa
//
LOCUS       XP_041346199             148 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal vesicle trafficking-associated protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041346199
VERSION     XP_041346199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490265.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..148
                     /product="neuronal vesicle trafficking-associated protein
                     1 isoform X2"
                     /calculated_mol_wt=16662
     Region          1..140
                     /region_name="Calcyon"
                     /note="D1 dopamine receptor-interacting protein (calcyon);
                     pfam06387"
                     /db_xref="CDD:461892"
     CDS             1..148
                     /gene="NSG1"
                     /coded_by="XM_041490265.1:212..658"
                     /db_xref="GeneID:121365796"
ORIGIN      
        1 mvklgnnfse kstkqplled gfdtiplitp ldvnqlqfpp pdkvvvktkt eyepdrkkgk
       61 frtpkiaeft isitegvser fknnqcipag lenyyseqds sargkfytvi nhynlakqti
      121 trsvspwmtv lseeklseqe teaaeksa
//
LOCUS       XP_041346208             308 aa            linear   VRT 06-MAY-2021
DEFINITION  zeta-sarcoglycan isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041346208
VERSION     XP_041346208.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490274.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..308
                     /product="zeta-sarcoglycan isoform X1"
                     /calculated_mol_wt=33572
     Region          25..295
                     /region_name="Sarcoglycan_1"
                     /note="Sarcoglycan complex subunit protein; pfam04790"
                     /db_xref="CDD:461428"
     CDS             1..308
                     /gene="SGCZ"
                     /coded_by="XM_041490274.1:1..927"
                     /db_xref="GeneID:121365809"
ORIGIN      
        1 mtreqyilat qqnslprteh pqfypvgiyg wrkrclyffv llllvtmivn lamtiwilkv
       61 mnftvdgmgn lrvtkkgirl egisefllpl yvkeihsrkd splvlqsdrn vtvnarnhmg
      121 qltgqltvga daveaqckrf evrasdsgrv lfsadedeiv igadrlkvtg tegavfghsv
      181 etphiraeps qdlklesptr slvmeaprgv qvnaaagdlk atcrkelhlq stegeiflna
      241 dtirlgnlpv gsfssssssf ssassspsss aprqtiyelc acpngklyls pagagstcqs
      301 ssniclws
//
LOCUS       XP_041346217             267 aa            linear   VRT 06-MAY-2021
DEFINITION  zeta-sarcoglycan isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041346217
VERSION     XP_041346217.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490283.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..267
                     /product="zeta-sarcoglycan isoform X2"
                     /calculated_mol_wt=29166
     Region          25..254
                     /region_name="Sarcoglycan_1"
                     /note="Sarcoglycan complex subunit protein; pfam04790"
                     /db_xref="CDD:461428"
     CDS             1..267
                     /gene="SGCZ"
                     /coded_by="XM_041490283.1:1..804"
                     /db_xref="GeneID:121365809"
ORIGIN      
        1 mtreqyilat qqnslprteh pqfypvgiyg wrkrclyffv llllvtmivn lamtiwilkv
       61 mnftvdgmgn lrvtkkgirl egisefllpl yvkeihsrkd splvlqsdrn vtvnarnhmg
      121 qltgqltvgt egavfghsve tphiraepsq dlklesptrs lvmeaprgvq vnaaagdlka
      181 tcrkelhlqs tegeiflnad tirlgnlpvg sfssssssfs sassspsssa prqtiyelca
      241 cpngklylsp agagstcqss sniclws
//
LOCUS       XP_041346230             485 aa            linear   VRT 06-MAY-2021
DEFINITION  D(1B) dopamine receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041346230
VERSION     XP_041346230.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490296.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="D(1B) dopamine receptor"
                     /calculated_mol_wt=52795
     Region          31..386
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          33..57
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320442"
     Region          67..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320442"
     Region          104..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320442"
     Region          149..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320442"
     Region          239..262
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320442"
     Region          312..334
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320442"
     Region          355..380
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320442"
     CDS             1..485
                     /gene="DRD5"
                     /coded_by="XM_041490296.1:1..1458"
                     /db_xref="GeneID:121365819"
ORIGIN      
        1 mlrggrsplp patgppgear gsagapgaaq vvagsllall ilwtlfgnvl vcaaivryrh
       61 lrskvtnifi vslavsdllv allvmpwkav aevagywpfg afcnvwvafd imcstasiln
      121 lcvisvdryw aisspfryer kmtqrlalvm isvawalsvl isfipvqlnw hkggdvvada
      181 digdgfgtaw aaagavttwa edmsttwval aavrpsdgts gsndtltgps escdsslnrt
      241 yaissslisf yipvaimivt ytriyriaqv qirrissler aaehaqscrs shidchhhts
      301 lkssirketk vlktlsvimg vfvccwlpff ilncmvpfce sppsdphagl pcvsettfni
      361 fvwfgwanss lnpiiyafna dfrkvfsnll gcghfcsgta vetvnisnel isynqdtlyh
      421 keivtayvnm ipnvvdceen redpfdrmsq ispdhevatd saceldcege islgkitpft
      481 pnglh
//
LOCUS       XP_041346243             422 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase 32B [Pyrgilauda ruficollis].
ACCESSION   XP_041346243
VERSION     XP_041346243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="serine/threonine-protein kinase 32B"
                     /calculated_mol_wt=48489
     Region          30..291
                     /region_name="STKc_Yank1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Yank1; cd05578"
                     /db_xref="CDD:270730"
     Site            order(37..41,45,58,60,92,108..109,111,115,117,154,156,
                     158..159,161,171..172,175,188..193,225,231,234)
                     /site_type="active"
                     /db_xref="CDD:270730"
     Site            order(37..41,45,58,60,92,109..111,115,154,156,158..159,
                     161,171..172)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270730"
     Site            order(41,115,117,154,156,158,175,188..193,225,231,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270730"
     Site            order(171..181,185..193)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270730"
     CDS             1..422
                     /gene="STK32B"
                     /coded_by="XM_041490309.1:207..1475"
                     /db_xref="GeneID:121365828"
ORIGIN      
        1 mrsrprnnmg gghshrapvf denedvnfdh fqilraigkg sfgkvcivqk rdtkkmyamk
       61 ymnkqkcier devrnvfrel qimqglehpf lvnlwysfqd eedmfmvvdl llggdlryhl
      121 qqnvhfnegt vklyicelal sldylqryhi ihrdikpdni lldehghvhi tdfnvativk
      181 gsekassmag tkpymapevf qafmdggpgy sypvdwwslg itayellrgw rpyeihsatp
      241 ideilnmfki ervhyssawc kgmiallkkl likdpecrls sladiqnspy ladvnwdavl
      301 ekavtpgfvp nkgrlncdpt feleemiles kplhkkkkrl aknkskdgak etcplnvhlq
      361 qcletvrkef iifnreklrr qqdqsgqtss idsraslqsh eklqdgrnnn llghgctrgc
      421 ss
//
LOCUS       XP_041346257             708 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041346257
VERSION     XP_041346257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490323.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="kelch-like protein 5 isoform X1"
                     /calculated_mol_wt=79117
     Region          173..695
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          457..500
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          504..548
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          551..594
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          598..648
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          651..694
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..708
                     /gene="KLHL5"
                     /coded_by="XM_041490323.1:1..2127"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 msgsrkefdv kqilkirwrw fghqasapss atenhqgdfw nrgqnvttgg rkfldsgnlp
       61 ltsvgyrrss qqdfqnsplw pmastseipt fefsaedcgg arwldrqead draseeenes
      121 dssscsrtsn sshtlsscqt mepctsdeff qalnhaeqtf kkmenylrhn qlcdvvlvag
      181 drripahrlv lssvsdyfaa mftndvrear qeeikmegve pkalwalvqy aytgrlelke
      241 dniecllsta cllqlsqvve acckflmkql hpsnclgirs fadaqgctdl hkvahnytme
      301 nfmevirnqe flllpateia kllasddmni pneetilnal ltwvrhdleq rrkdlsklla
      361 yirlpllapq fladmennal frddiecqkl imeamkyhll perrpmlqsp rtkprkstvg
      421 vlfavggmda tkgatsieky elrtntwtpv anmngrrlqf gvavlddklf vvggrdglkt
      481 lntvecynpr sktwsvmppm sthrhglgva vlegpmyavg ghdgwsylnt verwdpqarq
      541 wnfvasmstp rstvgvailn gklyavggrd gssclksvec fdphtnkwtl caqmskrrgg
      601 vgvttwngfl yaigghdapa snltsrlsdc verydpktdm wtavasmsis rdavgvcllg
      661 dklyavggyd gqtylntves ydpqtnewtq vaplclgrag acvvtvkl
//
LOCUS       XP_041346265             637 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041346265
VERSION     XP_041346265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..637
                     /product="kelch-like protein 5 isoform X2"
                     /calculated_mol_wt=70835
     Region          150..279
                     /region_name="BTB_POZ_KLHL5"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 5 (KLHL5); cd18337"
                     /db_xref="CDD:349646"
     Region          173..624
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          386..429
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          433..477
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          480..523
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          527..577
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          580..623
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..637
                     /gene="KLHL5"
                     /coded_by="XM_041490331.1:1..1914"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 msgsrkefdv kqilkirwrw fghqasapss atenhqgdfw nrgqnvttgg rkfldsgnlp
       61 ltsvgyrrss qqdfqnsplw pmastseipt fefsaedcgg arwldrqead draseeenes
      121 dssscsrtsn sshtlsscqt mepctsdeff qalnhaeqtf kkmenylrhn qlcdvvlvag
      181 drripahrlv lssvsdyfaa mftndvrear qeeikmegve pkalwalvqy aytgrlelke
      241 dniecllsta cllqlsqvve acckflmkql hpsnclgirs fadaqgctdl hkvahnytmf
      301 ladmennalf rddiecqkli meamkyhllp errpmlqspr tkprkstvgv lfavggmdat
      361 kgatsiekye lrtntwtpva nmngrrlqfg vavlddklfv vggrdglktl ntvecynprs
      421 ktwsvmppms thrhglgvav legpmyavgg hdgwsylntv erwdpqarqw nfvasmstpr
      481 stvgvailng klyavggrdg ssclksvecf dphtnkwtlc aqmskrrggv gvttwngfly
      541 aigghdapas nltsrlsdcv erydpktdmw tavasmsisr davgvcllgd klyavggydg
      601 qtylntvesy dpqtnewtqv aplclgraga cvvtvkl
//
LOCUS       XP_041346274             568 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041346274
VERSION     XP_041346274.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490340.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="kelch-like protein 5 isoform X3"
                     /calculated_mol_wt=63446
     Region          33..555
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          317..360
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          364..408
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          411..454
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          458..508
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          511..554
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..568
                     /gene="KLHL5"
                     /coded_by="XM_041490340.1:274..1980"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 mepctsdeff qalnhaeqtf kkmenylrhn qlcdvvlvag drripahrlv lssvsdyfaa
       61 mftndvrear qeeikmegve pkalwalvqy aytgrlelke dniecllsta cllqlsqvve
      121 acckflmkql hpsnclgirs fadaqgctdl hkvahnytme nfmevirnqe flllpateia
      181 kllasddmni pneetilnal ltwvrhdleq rrkdlsklla yirlpllapq fladmennal
      241 frddiecqkl imeamkyhll perrpmlqsp rtkprkstvg vlfavggmda tkgatsieky
      301 elrtntwtpv anmngrrlqf gvavlddklf vvggrdglkt lntvecynpr sktwsvmppm
      361 sthrhglgva vlegpmyavg ghdgwsylnt verwdpqarq wnfvasmstp rstvgvailn
      421 gklyavggrd gssclksvec fdphtnkwtl caqmskrrgg vgvttwngfl yaigghdapa
      481 snltsrlsdc verydpktdm wtavasmsis rdavgvcllg dklyavggyd gqtylntves
      541 ydpqtnewtq vaplclgrag acvvtvkl
//
LOCUS       XP_041346283             568 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041346283
VERSION     XP_041346283.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490349.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="kelch-like protein 5 isoform X3"
                     /calculated_mol_wt=63446
     Region          33..555
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          317..360
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          364..408
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          411..454
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          458..508
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          511..554
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..568
                     /gene="KLHL5"
                     /coded_by="XM_041490349.1:271..1977"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 mepctsdeff qalnhaeqtf kkmenylrhn qlcdvvlvag drripahrlv lssvsdyfaa
       61 mftndvrear qeeikmegve pkalwalvqy aytgrlelke dniecllsta cllqlsqvve
      121 acckflmkql hpsnclgirs fadaqgctdl hkvahnytme nfmevirnqe flllpateia
      181 kllasddmni pneetilnal ltwvrhdleq rrkdlsklla yirlpllapq fladmennal
      241 frddiecqkl imeamkyhll perrpmlqsp rtkprkstvg vlfavggmda tkgatsieky
      301 elrtntwtpv anmngrrlqf gvavlddklf vvggrdglkt lntvecynpr sktwsvmppm
      361 sthrhglgva vlegpmyavg ghdgwsylnt verwdpqarq wnfvasmstp rstvgvailn
      421 gklyavggrd gssclksvec fdphtnkwtl caqmskrrgg vgvttwngfl yaigghdapa
      481 snltsrlsdc verydpktdm wtavasmsis rdavgvcllg dklyavggyd gqtylntves
      541 ydpqtnewtq vaplclgrag acvvtvkl
//
LOCUS       XP_041346292             568 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041346292
VERSION     XP_041346292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="kelch-like protein 5 isoform X3"
                     /calculated_mol_wt=63446
     Region          33..555
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          317..360
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          364..408
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          411..454
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          458..508
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          511..554
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..568
                     /gene="KLHL5"
                     /coded_by="XM_041490358.1:165..1871"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 mepctsdeff qalnhaeqtf kkmenylrhn qlcdvvlvag drripahrlv lssvsdyfaa
       61 mftndvrear qeeikmegve pkalwalvqy aytgrlelke dniecllsta cllqlsqvve
      121 acckflmkql hpsnclgirs fadaqgctdl hkvahnytme nfmevirnqe flllpateia
      181 kllasddmni pneetilnal ltwvrhdleq rrkdlsklla yirlpllapq fladmennal
      241 frddiecqkl imeamkyhll perrpmlqsp rtkprkstvg vlfavggmda tkgatsieky
      301 elrtntwtpv anmngrrlqf gvavlddklf vvggrdglkt lntvecynpr sktwsvmppm
      361 sthrhglgva vlegpmyavg ghdgwsylnt verwdpqarq wnfvasmstp rstvgvailn
      421 gklyavggrd gssclksvec fdphtnkwtl caqmskrrgg vgvttwngfl yaigghdapa
      481 snltsrlsdc verydpktdm wtavasmsis rdavgvcllg dklyavggyd gqtylntves
      541 ydpqtnewtq vaplclgrag acvvtvkl
//
LOCUS       XP_041346300             627 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041346300
VERSION     XP_041346300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="kelch-like protein 5 isoform X4"
                     /calculated_mol_wt=69853
     Region          92..614
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          376..419
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          423..467
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          470..513
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          517..567
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          570..613
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..627
                     /gene="KLHL5"
                     /coded_by="XM_041490366.1:256..2139"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 mastseiptf efsaedcgga rwldrqeadd raseeenesd ssscsrtsns shtlsscqtm
       61 epctsdeffq alnhaeqtfk kmenylrhnq lcdvvlvagd rripahrlvl ssvsdyfaam
      121 ftndvrearq eeikmegvep kalwalvqya ytgrlelked niecllstac llqlsqvvea
      181 cckflmkqlh psnclgirsf adaqgctdlh kvahnytmen fmevirnqef lllpateiak
      241 llasddmnip neetilnall twvrhdleqr rkdlskllay irlpllapqf ladmennalf
      301 rddiecqkli meamkyhllp errpmlqspr tkprkstvgv lfavggmdat kgatsiekye
      361 lrtntwtpva nmngrrlqfg vavlddklfv vggrdglktl ntvecynprs ktwsvmppms
      421 thrhglgvav legpmyavgg hdgwsylntv erwdpqarqw nfvasmstpr stvgvailng
      481 klyavggrdg ssclksvecf dphtnkwtlc aqmskrrggv gvttwngfly aigghdapas
      541 nltsrlsdcv erydpktdmw tavasmsisr davgvcllgd klyavggydg qtylntvesy
      601 dpqtnewtqv aplclgraga cvvtvkl
//
LOCUS       XP_041346310             508 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041346310
VERSION     XP_041346310.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490376.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="kelch-like protein 5 isoform X5"
                     /calculated_mol_wt=56550
     Region          <1..>50
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          27..495
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          257..300
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          304..348
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          351..394
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          398..448
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          451..494
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..508
                     /gene="KLHL5"
                     /coded_by="XM_041490376.1:132..1658"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 mftndvrear qeeikmegve pkalwalvqy aytgrlelke dniecllsta cllqlsqvve
       61 acckflmkql hpsnclgirs fadaqgctdl hkvahnytme nfmevirnqe flllpateia
      121 kllasddmni pneetilnal ltwvrhdleq rrkdlsklla yirlpllapq fladmennal
      181 frddiecqkl imeamkyhll perrpmlqsp rtkprkstvg vlfavggmda tkgatsieky
      241 elrtntwtpv anmngrrlqf gvavlddklf vvggrdglkt lntvecynpr sktwsvmppm
      301 sthrhglgva vlegpmyavg ghdgwsylnt verwdpqarq wnfvasmstp rstvgvailn
      361 gklyavggrd gssclksvec fdphtnkwtl caqmskrrgg vgvttwngfl yaigghdapa
      421 snltsrlsdc verydpktdm wtavasmsis rdavgvcllg dklyavggyd gqtylntves
      481 ydpqtnewtq vaplclgrag acvvtvkl
//
LOCUS       XP_041346319             568 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041346319
VERSION     XP_041346319.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490385.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="kelch-like protein 5 isoform X3"
                     /calculated_mol_wt=63446
     Region          33..555
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          317..360
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          364..408
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          411..454
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          458..508
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          511..554
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..568
                     /gene="KLHL5"
                     /coded_by="XM_041490385.1:246..1952"
                     /db_xref="GeneID:121365833"
ORIGIN      
        1 mepctsdeff qalnhaeqtf kkmenylrhn qlcdvvlvag drripahrlv lssvsdyfaa
       61 mftndvrear qeeikmegve pkalwalvqy aytgrlelke dniecllsta cllqlsqvve
      121 acckflmkql hpsnclgirs fadaqgctdl hkvahnytme nfmevirnqe flllpateia
      181 kllasddmni pneetilnal ltwvrhdleq rrkdlsklla yirlpllapq fladmennal
      241 frddiecqkl imeamkyhll perrpmlqsp rtkprkstvg vlfavggmda tkgatsieky
      301 elrtntwtpv anmngrrlqf gvavlddklf vvggrdglkt lntvecynpr sktwsvmppm
      361 sthrhglgva vlegpmyavg ghdgwsylnt verwdpqarq wnfvasmstp rstvgvailn
      421 gklyavggrd gssclksvec fdphtnkwtl caqmskrrgg vgvttwngfl yaigghdapa
      481 snltsrlsdc verydpktdm wtavasmsis rdavgvcllg dklyavggyd gqtylntves
      541 ydpqtnewtq vaplclgrag acvvtvkl
//
LOCUS       XP_041346330             658 aa            linear   VRT 06-MAY-2021
DEFINITION  translation factor GUF1, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346330
VERSION     XP_041346330.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490396.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..658
                     /product="translation factor GUF1, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=73332
     Region          52..653
                     /region_name="LepA"
                     /note="Translation elongation factor EF-4, membrane-bound
                     GTPase [Translation, ribosomal structure and biogenesis];
                     COG0481"
                     /db_xref="CDD:440249"
     CDS             1..658
                     /gene="GUF1"
                     /coded_by="XM_041490396.1:104..2080"
                     /db_xref="GeneID:121365866"
ORIGIN      
        1 malagraalr wgarlpspgp aaaplcrpaw lpaacgrpys srgkekvdms mypvesirnf
       61 siiahvdhgk stladrllei tgtisktdrn kqvldklqve rergitvkaq saslfynheg
      121 inyllnlidt pghvdfsyev srslsacqgv ilvvdanegi qaqtvanfyl afeaqlsiip
      181 vinkidlkna dpervekqie klfdiptdec irisakqgtn vekvlqkvie kipppqcnta
      241 dplkalvfds tfdhyrgvia nialfggeia kgqkivsaht kkryevnevg iltpneqpth
      301 klyagqvgyl iagmkevtea qigdtlflyk qpveplpgfk sakpmvfagm ypidqteynn
      361 lksalerltl ndssvtvhrd sslalgagwr lgflgllhme vfnqrleqey nmsviltapt
      421 vpykavlssa klikeygndq itiinpaqfp dklsvseyle ptvlgtivtp peyigkiitl
      481 cqdrravqkd mlyidenrvm lkylfplnei vvdfydalks lssgyasfdy edagyqsadl
      541 ikmdillngn pveelatvih ndkayaagkl lcerlketip rqlfeiaiqa aigkkiiare
      601 tlkpyrknvv akcyggditr rmkllrrqae gkrlmrkign vevprdafir vlkretdk
//
LOCUS       XP_041346336             376 aa            linear   VRT 06-MAY-2021
DEFINITION  translation factor GUF1, mitochondrial isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346336
VERSION     XP_041346336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..376
                     /product="translation factor GUF1, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=42161
     Region          <22..371
                     /region_name="LepA"
                     /note="Translation elongation factor EF-4, membrane-bound
                     GTPase [Translation, ribosomal structure and biogenesis];
                     COG0481"
                     /db_xref="CDD:440249"
     CDS             1..376
                     /gene="GUF1"
                     /coded_by="XM_041490402.1:223..1353"
                     /db_xref="GeneID:121365866"
ORIGIN      
        1 mnatasrnwl lngssgkkts yagqvgylia gmkevteaqi gdtlflykqp veplpgfksa
       61 kpmvfagmyp idqteynnlk salerltlnd ssvtvhrdss lalgagwrlg flgllhmevf
      121 nqrleqeynm sviltaptvp ykavlssakl ikeygndqit iinpaqfpdk lsvseylept
      181 vlgtivtppe yigkiitlcq drravqkdml yidenrvmlk ylfplneivv dfydalksls
      241 sgyasfdyed agyqsadlik mdillngnpv eelatvihnd kayaagkllc erlketiprq
      301 lfeiaiqaai gkkiiaretl kpyrknvvak cyggditrrm kllrrqaegk rlmrkignve
      361 vprdafirvl kretdk
//
LOCUS       XP_041346349             569 aa            linear   VRT 06-MAY-2021
DEFINITION  G protein-coupled receptor kinase 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346349
VERSION     XP_041346349.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490415.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="G protein-coupled receptor kinase 4 isoform X1"
                     /calculated_mol_wt=65523
     Region          49..180
                     /region_name="RGS_GRK4"
                     /note="Regulator of G protein signaling domain (RGS) found
                     in G protein-coupled receptor kinase 4 (GRK4); cd08750"
                     /db_xref="CDD:188704"
     Site            order(66,69,160,162..163,165..166)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:188704"
     Region          182..466
                     /region_name="STKc_GRK4"
                     /note="Catalytic domain of the Serine/Threonine Kinase, G
                     protein-coupled Receptor Kinase 4; cd05631"
                     /db_xref="CDD:173720"
     Site            order(189..193,197,210,212,244,260..261,263,267,269,308,
                     310,312..313,315,325..326,329,342..347,374,380,383)
                     /site_type="active"
                     /db_xref="CDD:173720"
     Site            order(189..193,197,210,212,261..263,315,326)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173720"
     Site            order(193,267,269,308,310,312,329,342..347,374,380,383)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173720"
     Site            325..347
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173720"
     CDS             1..569
                     /gene="GRK4"
                     /coded_by="XM_041490415.1:227..1936"
                     /db_xref="GeneID:121365873"
ORIGIN      
        1 meienivant vllkaregkr sgrskkwkem lklppvshce gircsierdy sqlcdkqpig
       61 rllfrqfcds rpdlkrcief ldavaeyevs sdekridcgl kvletyftng saahlpeipq
      121 etvneckarl eknpskdlfm dctrivheyl skrpfeayqe svyfsrflqw kwlekqpvtk
      181 htfrhyrvlg kggfgevcac qvratgkmya ckklekkrik krkgesmaln ekrilekvns
      241 rfvvslsyty etkdalclvl timnggdlkf hiynmgnpgf deeraifyaa elccgledlq
      301 rerivyrdlk penillddcg hirisdlgla vqipegetvr grvgtvgyma pevlknekyt
      361 fspdwwglgc liyemiegqs pfrkhkervk rdeidrrvke dqetysdkfs eeaksicrml
      421 laknpgerlg cteggaavvk qhpifkninf krleanmlep pflpdpravy ckdvldieqf
      481 stvkgvnldt tdddfyskfv tgcvsipwqn emietgcfed inayetdgtv spdrekspkp
      541 krgffhrlfs gevcfksdcs ddeqessrl
//
LOCUS       XP_041346355             543 aa            linear   VRT 06-MAY-2021
DEFINITION  G protein-coupled receptor kinase 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346355
VERSION     XP_041346355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490421.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..543
                     /product="G protein-coupled receptor kinase 4 isoform X2"
                     /calculated_mol_wt=62574
     Region          49..154
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     Region          156..440
                     /region_name="STKc_GRK4"
                     /note="Catalytic domain of the Serine/Threonine Kinase, G
                     protein-coupled Receptor Kinase 4; cd05631"
                     /db_xref="CDD:173720"
     Site            order(163..167,171,184,186,218,234..235,237,241,243,282,
                     284,286..287,289,299..300,303,316..321,348,354,357)
                     /site_type="active"
                     /db_xref="CDD:173720"
     Site            order(163..167,171,184,186,235..237,289,300)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173720"
     Site            order(167,241,243,282,284,286,303,316..321,348,354,357)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173720"
     Site            299..321
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173720"
     CDS             1..543
                     /gene="GRK4"
                     /coded_by="XM_041490421.1:227..1858"
                     /db_xref="GeneID:121365873"
ORIGIN      
        1 meienivant vllkaregkr sgrskkwkem lklppvshce gircsierdy sqlcdkqpig
       61 rllfrqfcds rpdlkrcief ldavsaahlp eipqetvnec karleknpsk dlfmdctriv
      121 heylskrpfe ayqesvyfsr flqwkwlekq pvtkhtfrhy rvlgkggfge vcacqvratg
      181 kmyackklek krikkrkges malnekrile kvnsrfvvsl sytyetkdal clvltimngg
      241 dlkfhiynmg npgfdeerai fyaaelccgl edlqrerivy rdlkpenill ddcghirisd
      301 lglavqipeg etvrgrvgtv gymapevlkn ekytfspdww glgcliyemi egqspfrkhk
      361 ervkrdeidr rvkedqetys dkfseeaksi crmllaknpg erlgctegga avvkqhpifk
      421 ninfkrlean mleppflpdp ravyckdvld ieqfstvkgv nldttdddfy skfvtgcvsi
      481 pwqnemietg cfedinayet dgtvspdrek spkpkrgffh rlfsgevcfk sdcsddeqes
      541 srl
//
LOCUS       XP_041346371             321 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C4orf19 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041346371
VERSION     XP_041346371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490437.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="uncharacterized protein C4orf19 homolog"
                     /calculated_mol_wt=34558
     Region          9..292
                     /region_name="DUF4699"
                     /note="Domain of unknown function (DUF4699); pfam15770"
                     /db_xref="CDD:464858"
     CDS             1..321
                     /gene="CUNH4orf19"
                     /coded_by="XM_041490437.1:331..1296"
                     /db_xref="GeneID:121365888"
ORIGIN      
        1 mgcrcckmiq syifdpeevq ssgcihevns ykhneqgsnk skfkensene epknelqkde
       61 vnktenknpv ssitetlwnh rgndsqedgl vkcaakldva vnggnscaqh sipnpntspv
      121 ketsekgtss qseaspasnr dfytksnrsg qeldletgsq skaasnvphs ipdsqsagds
      181 iflkgnsile renntirlpd idypqngnqt gnyvekdsfs vncthsdqnt gasaiqdqdl
      241 rvippwpvke sstepfktds atlsesltag itavavtqas thtnhkdvng gieeedaeva
      301 aalaaleaat agedveddde y
//
LOCUS       XP_041346385             961 aa            linear   VRT 06-MAY-2021
DEFINITION  lateral signaling target protein 2 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346385
VERSION     XP_041346385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..961
                     /product="lateral signaling target protein 2 homolog
                     isoform X1"
                     /calculated_mol_wt=107124
     Region          884..948
                     /region_name="FYVE_LST2"
                     /note="FYVE domain found in lateral signaling target
                     protein 2 homolog (Lst2) and similar proteins; cd15731"
                     /db_xref="CDD:277270"
     Site            order(888,891,909..914,916..917,941..943)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277270"
     CDS             1..961
                     /gene="ZFYVE28"
                     /coded_by="XM_041490451.1:244..3129"
                     /db_xref="GeneID:121365891"
ORIGIN      
        1 mmnrfrkwly kpkrtdpqll aqfyyadeel nqvaaeldsl dgrkdpqrct llvnqfrscq
       61 dnvlniinqi mdeciphera nrdfcvkfpe eirhdnlagq lwfgaeclaa gsiimnreie
      121 smamrplakd ltrsleevrn iirdqalrdl nlytekmkds lkhfdvlfae felsyvsamv
      181 pvkspkeyyv qqevivlfce tveralrlgy ltqdmiddye palmftiprl aivcglvvys
      241 egplnldhkp edmselfrpf htllrkirdl lqtltedelh tlernlcisq dvdfpvradp
      301 evpsvmapgi tatlppkels akaenteael acsmqydeqe leqlnrmvhr vgdemsslls
      361 ppsicqspah rpslrnssst easptrhhld nltdeedrvf fmddldgage alagldsvsd
      421 tfawvnnpch nskqnlqyrd allyenghqt eetlllkdae sdlsnnnnve dgkqmpgisv
      481 pnscsclega dsqlylngwd ayaddaetae viahrtggmk isatvifnpk spsssespvt
      541 tpeaaiscip gsanplanee edeshklsia atnclinscv ccgscedsre dgveglkskh
      601 saggvvnasy tlvkskemdh vdnldnsvpe qetlkpetsa llaerdfgse eqklpvsskc
      661 lahssgsqvg vesdsqgeae sisnqqkkwe krkqlcdkkm dynedasser takedvksrs
      721 ssssqdglrd splssisssd yesvsvttcs lssiyalssl mtsscssddi dqeeiqlalq
      781 aakiatreki rsrfhgsndl ihrlfvcisg vadqlqtnya sdlrsilktl fevmatkpet
      841 edkekqkkvn hglrnaaled calcqesiss selaakardg dfedppdwvp devcsyctac
      901 kapftvirrk hhcrscgkif csrcsshsap lprygqmkpv rvcthcymfh vtpfysdrag
      961 i
//
LOCUS       XP_041346394             960 aa            linear   VRT 06-MAY-2021
DEFINITION  lateral signaling target protein 2 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346394
VERSION     XP_041346394.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490460.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..960
                     /product="lateral signaling target protein 2 homolog
                     isoform X2"
                     /calculated_mol_wt=107037
     Region          883..947
                     /region_name="FYVE_LST2"
                     /note="FYVE domain found in lateral signaling target
                     protein 2 homolog (Lst2) and similar proteins; cd15731"
                     /db_xref="CDD:277270"
     Site            order(887,890,908..913,915..916,940..942)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277270"
     CDS             1..960
                     /gene="ZFYVE28"
                     /coded_by="XM_041490460.1:244..3126"
                     /db_xref="GeneID:121365891"
ORIGIN      
        1 mmnrfrkwly kpkrtdpqll aqfyyadeel nqvaaeldsl dgrkdpqrct llvnqfrscq
       61 dnvlniinqi mdeciphera nrdfcvkfpe eirhdnlagq lwfgaeclaa gsiimnreie
      121 smamrplakd ltrsleevrn iirdqalrdl nlytekmkds lkhfdvlfae felsyvsamv
      181 pvkspkeyyv qqevivlfce tveralrlgy ltqdmiddye palmftiprl aivcglvvys
      241 egplnldhkp edmselfrpf htllrkirdl lqtltedelh tlernlcisq dvdfpvradp
      301 evpsvmapgi tatlppkels akaenteael acsmqydeqe leqlnrmvhr vgdemsslls
      361 ppsicqspah rpslrnssst easptrhhld nltdeedrvf fmddldgage alagldsvsd
      421 tfawvnnpch nskqnlqyrd allyenghqt eetlllkdae sdlsnnnnve dgkqmpgisv
      481 pnscsclega dsqlylngwd ayaddaetae viahrtggmk isatvifnpk spsssespvt
      541 tpeaaiscip gsanplanee edeshklsia atnclinscv ccgscedsre dgveglkskh
      601 saggvvnasy tlvkskemdh vdnldnsvpe qetlkpetsa llaerdfgse eqklpvsskc
      661 lahssgsqvg vesdsqgeae sisnqqkkwe krkqlcdkkm dynedasser takedvksrs
      721 ssssqdglrd splssisssd yesvsvttcs lssiyalslm tsscssddid qeeiqlalqa
      781 akiatrekir srfhgsndli hrlfvcisgv adqlqtnyas dlrsilktlf evmatkpete
      841 dkekqkkvnh glrnaaledc alcqesisss elaakardgd fedppdwvpd evcsyctack
      901 apftvirrkh hcrscgkifc srcsshsapl prygqmkpvr vcthcymfhv tpfysdragi
//
LOCUS       XP_041346404             926 aa            linear   VRT 06-MAY-2021
DEFINITION  lateral signaling target protein 2 homolog isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346404
VERSION     XP_041346404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..926
                     /product="lateral signaling target protein 2 homolog
                     isoform X3"
                     /calculated_mol_wt=103499
     Region          849..913
                     /region_name="FYVE_LST2"
                     /note="FYVE domain found in lateral signaling target
                     protein 2 homolog (Lst2) and similar proteins; cd15731"
                     /db_xref="CDD:277270"
     Site            order(853,856,874..879,881..882,906..908)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277270"
     CDS             1..926
                     /gene="ZFYVE28"
                     /coded_by="XM_041490470.1:244..3024"
                     /db_xref="GeneID:121365891"
ORIGIN      
        1 mmnrfrkwly kpkrtdpqll aqfyyadeel nqvaaeldsl dgrkdpqrct llvnqfrscq
       61 dnvlniinqi mdeciphera nrdfcvkfpe eirhdnlagq lwfgaeclaa gsiimnreie
      121 smamrplakd ltrsleevrn iirdqalrdl nlytekmkds lkhfdvlfae felsyvsamv
      181 pvkspkeyyv qqevivlfce tveralrlgy ltqdmiddye palmftiprl aivcglvvys
      241 egplnldhkp edmselfrpf htllrkirdl lqtltedelh tlernlcisq dvdfpvradp
      301 evpsvmapgi tatlppkels akaenteael acsmqydeqe leqlnrmvhr vgdemsslls
      361 ppsicqspah rpslrnssst easptrhhld nltdeedrvf fmddldgage alagldsvsd
      421 tfawvnnpch nskqnlqyrd allyenghqt eetlllkdae sdlsnnnnve dgkqmpgisv
      481 pnscsclega dsqlylngwd ayaddaetae viahrtggmk isatvifnpk spsssespvt
      541 tpeaaiscip gsanplanee edeshklsia atnclinscv ccgscedsre dgveglkskh
      601 saggvvnasy tlvkskemdh vdnldnsvpe qetlkpetsa llaerdfgse eqklpvsskc
      661 lahssgsqvg vesdsqgeae sisnqqkkwe krkqlcdkkm dynedasser takedvksrs
      721 sssslmtssc ssddidqeei qlalqaakia trekirsrfh gsndlihrlf vcisgvadql
      781 qtnyasdlrs ilktlfevma tkpetedkek qkkvnhglrn aaledcalcq esissselaa
      841 kardgdfedp pdwvpdevcs yctackapft virrkhhcrs cgkifcsrcs shsaplpryg
      901 qmkpvrvcth cymfhvtpfy sdragi
//
LOCUS       XP_041346412             925 aa            linear   VRT 06-MAY-2021
DEFINITION  lateral signaling target protein 2 homolog isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346412
VERSION     XP_041346412.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490478.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..925
                     /product="lateral signaling target protein 2 homolog
                     isoform X4"
                     /calculated_mol_wt=103412
     Region          848..912
                     /region_name="FYVE_LST2"
                     /note="FYVE domain found in lateral signaling target
                     protein 2 homolog (Lst2) and similar proteins; cd15731"
                     /db_xref="CDD:277270"
     Site            order(852,855,873..878,880..881,905..907)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277270"
     CDS             1..925
                     /gene="ZFYVE28"
                     /coded_by="XM_041490478.1:244..3021"
                     /db_xref="GeneID:121365891"
ORIGIN      
        1 mmnrfrkwly kpkrtdpqll aqfyyadeel nqvaaeldsl dgrkdpqrct llvnqfrscq
       61 dnvlniinqi mdeciphera nrdfcvkfpe eirhdnlagq lwfgaeclaa gsiimnreie
      121 smamrplakd ltrsleevrn iirdqalrdl nlytekmkds lkhfdvlfae felsyvsamv
      181 pvkspkeyyv qqevivlfce tveralrlgy ltqdmiddye palmftiprl aivcglvvys
      241 egplnldhkp edmselfrpf htllrkirdl lqtltedelh tlernlcisq dvdfpvradp
      301 evpsvmapgi tatlppkels akaenteael acsmqydeqe leqlnrmvhr vgdemsslls
      361 ppsicqspah rpslrnssst easptrhhld nltdeedrvf fmddldgage alagldsvsd
      421 tfawvnnpch nskqnlqyrd allyenghqt eetlllkdae sdlsnnnnve dgkqmpgisv
      481 pnscsclega dsqlylngwd ayaddaetae viahrtggmk isatvifnpk spsssespvt
      541 tpeaaiscip gsanplanee edeshklsia atnclinscv ccgscedsre dgveglkskh
      601 saggvvnasy tlvkskemdh vdnldnsvpe qetlkpetsa llaerdfgse eqklpvsskc
      661 lahssgsqvg vesdsqgeae sisnqqkkwe krkqlcdkkm dynedasser takedvksrs
      721 ssslmtsscs sddidqeeiq lalqaakiat rekirsrfhg sndlihrlfv cisgvadqlq
      781 tnyasdlrsi lktlfevmat kpetedkekq kkvnhglrna aledcalcqe sissselaak
      841 ardgdfedpp dwvpdevcsy ctackapftv irrkhhcrsc gkifcsrcss hsaplprygq
      901 mkpvrvcthc ymfhvtpfys dragi
//
LOCUS       XP_041346422             774 aa            linear   VRT 06-MAY-2021
DEFINITION  lateral signaling target protein 2 homolog isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346422
VERSION     XP_041346422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..774
                     /product="lateral signaling target protein 2 homolog
                     isoform X5"
                     /calculated_mol_wt=86295
     CDS             1..774
                     /gene="ZFYVE28"
                     /coded_by="XM_041490488.1:244..2568"
                     /db_xref="GeneID:121365891"
ORIGIN      
        1 mmnrfrkwly kpkrtdpqll aqfyyadeel nqvaaeldsl dgrkdpqrct llvnqfrscq
       61 dnvlniinqi mdeciphera nrdfcvkfpe eirhdnlagq lwfgaeclaa gsiimnreie
      121 smamrplakd ltrsleevrn iirdqalrdl nlytekmkds lkhfdvlfae felsyvsamv
      181 pvkspkeyyv qqevivlfce tveralrlgy ltqdmiddye palmftiprl aivcglvvys
      241 egplnldhkp edmselfrpf htllrkirdl lqtltedelh tlernlcisq dvdfpvradp
      301 evpsvmapgi tatlppkels akaenteael acsmqydeqe leqlnrmvhr vgdemsslls
      361 ppsicqspah rpslrnssst easptrhhld nltdeedrvf fmddldgage alagldsvsd
      421 tfawvnnpch nskqnlqyrd allyenghqt eetlllkdae sdlsnnnnve dgkqmpgisv
      481 pnscsclega dsqlylngwd ayaddaetae viahrtggmk isatvifnpk spsssespvt
      541 tpeaaiscip gsanplanee edeshklsia atnclinscv ccgscedsre dgveglkskh
      601 saggvvnasy tlvkskemdh vdnldnsvpe qetlkpetsa llaerdfgse eqklpvsskc
      661 lahssgsqvg vesdsqgeae sisnqqkkwe krkqlcdkkm dynedasser takedvksrs
      721 ssssqdglrd splssisssd yesvsvttcs lssiyalsch rvkikrdgdw lrad
//
LOCUS       XP_041346435             270 aa            linear   VRT 06-MAY-2021
DEFINITION  lateral signaling target protein 2 homolog isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346435
VERSION     XP_041346435.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490501.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="lateral signaling target protein 2 homolog
                     isoform X6"
                     /calculated_mol_wt=31536
     CDS             1..270
                     /gene="ZFYVE28"
                     /coded_by="XM_041490501.1:244..1056"
                     /db_xref="GeneID:121365891"
ORIGIN      
        1 mmnrfrkwly kpkrtdpqll aqfyyadeel nqvaaeldsl dgrkdpqrct llvnqfrscq
       61 dnvlniinqi mdeciphera nrdfcvkfpe eirhdnlagq lwfgaeclaa gsiimnreie
      121 smamrplakd ltrsleevrn iirdqalrdl nlytekmkds lkhfdvlfae felsyvsamv
      181 pvkspkeyyv qqevivlfce tveralrlgy ltqdmiddye palmftiprl aivcglvvys
      241 egplnldhkp edmselfrpf htllrkircl
//
LOCUS       XP_041346449             320 aa            linear   VRT 06-MAY-2021
DEFINITION  heparan sulfate glucosamine 3-O-sulfotransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346449
VERSION     XP_041346449.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490515.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     1"
                     /calculated_mol_wt=37348
     Region          62..299
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..320
                     /gene="HS3ST1"
                     /coded_by="XM_041490515.1:168..1130"
                     /db_xref="GeneID:121365920"
ORIGIN      
        1 maafllgavl livqpqivps rpainsnaet ssqsvqrell kktsqkndfk enihsngscq
       61 qlpqtiiigv rkggtralle mlslhpdiaa aesevhffdw edhyrnglqw yinqmpfsyp
      121 hqitvektpa yftspkvper vynmnqsmrl llilrdpser vlsdytqvfy nhmqkhkpyp
      181 sieqflikng elnvdykain rslyyihmqn wlkyfpldhi hivdgdklik dpfpeiekve
      241 rflklspqin asnfyfnktk gfyclrdsgr erclheskgr ahpqvdtrll gklqeyfhep
      301 nkkffelvgr tfdwhtfvas
//
LOCUS       XP_041346458             320 aa            linear   VRT 06-MAY-2021
DEFINITION  heparan sulfate glucosamine 3-O-sulfotransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346458
VERSION     XP_041346458.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490524.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     1"
                     /calculated_mol_wt=37348
     Region          62..299
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..320
                     /gene="HS3ST1"
                     /coded_by="XM_041490524.1:147..1109"
                     /db_xref="GeneID:121365920"
ORIGIN      
        1 maafllgavl livqpqivps rpainsnaet ssqsvqrell kktsqkndfk enihsngscq
       61 qlpqtiiigv rkggtralle mlslhpdiaa aesevhffdw edhyrnglqw yinqmpfsyp
      121 hqitvektpa yftspkvper vynmnqsmrl llilrdpser vlsdytqvfy nhmqkhkpyp
      181 sieqflikng elnvdykain rslyyihmqn wlkyfpldhi hivdgdklik dpfpeiekve
      241 rflklspqin asnfyfnktk gfyclrdsgr erclheskgr ahpqvdtrll gklqeyfhep
      301 nkkffelvgr tfdwhtfvas
//
LOCUS       XP_041346471             507 aa            linear   VRT 06-MAY-2021
DEFINITION  TNFAIP3-interacting protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041346471
VERSION     XP_041346471.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490537.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="TNFAIP3-interacting protein 2"
                     /calculated_mol_wt=57949
     Region          124..>415
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..507
                     /gene="TNIP2"
                     /coded_by="XM_041490537.1:79..1602"
                     /db_xref="GeneID:121365923"
ORIGIN      
        1 mhlsglplal ekeqkgagpa mcsvseasst dplvtrfrqv eetleklhre nrslknkvpr
       61 ynalctlyhe saqqlkhlql qlaakeatir elrgslarqr qppapggdaa agaeparslv
      121 eslleqleqt rdqlrdserl sarrvealsq evqklsqqle ekngeiqqmi nqppyekere
      181 ilrlqktlae rekaqatsdv lcrsltdeth qlqrklasta emcqhlakcl eekqrkekgn
      241 sddqipters nqlldnetsl qalicnlqee nrmlkqkvah vedlnakwqk ydasrdeyvk
      301 rlhlqlkemk sqldqhhgga paqrnsdlmh keifrlnkll eekmnecikt kreledmkka
      361 segdneriqm leqqvlvykd dftsersdre raqskiqelq aeiaclqhql arrqdsrdts
      421 shfrvhagnq nhlyvqtnve hlrgnspgqt gkrrtnsqse qasppgdngn lgsegraqge
      481 lrcphcmrff sdelgdeflk hvaeccq
//
LOCUS       XP_041346502             907 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346502
VERSION     XP_041346502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..907
                     /product="transforming acidic coiled-coil-containing
                     protein 3"
                     /calculated_mol_wt=100073
     Region          701..901
                     /region_name="TACC_C"
                     /note="Transforming acidic coiled-coil-containing protein
                     (TACC), C-terminal; pfam05010"
                     /db_xref="CDD:461517"
     CDS             1..907
                     /gene="TACC3"
                     /coded_by="XM_041490568.1:103..2826"
                     /db_xref="GeneID:121365941"
ORIGIN      
        1 mslqilnaen genggslkdd ltaedfdfff appeptgrps ilrlsqkenl ppksggkamk
       61 vtfqtpqrdp htrkilspam tdklqtafal ddcredvadd vlfapsdadt cqqkteaetn
      121 ntqmpekvsv apypddempv ksrgsynldf dnlndinpfq ssvqlphspg nlqkslvkvs
      181 sspektveks sdsllwdnaa pfasttaste clsedkglis ekesalskle sdksklspkq
      241 eigdseqgvk sastdasqtd nsvvlaeapt ppvqspgslg psgsdvsnsf kteesklqnv
      301 svaeqasaqe skpdeelsvs kekpaekpdv tkagpvklef dfdnttarkp ppkklgkrpg
      361 ikppakkipi tktkpentev qnksnvedei pipkasyqfd wdklddpnfn pfgggskist
      421 spkrskpspr kaplpeeqes asprreplpv eqdnrpsetc eavkkepksl emveqsvved
      481 mpkaqeekpg vqaeaelpgk revekqmsps kmspakvaps qdnlvstdsg kksmsaeeik
      541 pssprieata depagaepee lfrpssevfg mgidyleqfg sssfkesalr kqslylkfdp
      601 llrdsprkpi ygiiessesi mkapsqpgpv adlsqvpeea gkplvslese ekpkgldllg
      661 tfttsdsgpl ipdslssdvp pvpfatstna avdaiidvlk ysqkdmdaav elvkrevqek
      721 eleiekwsqk ynklhmeyke mgkivaefeq titqimedaq kqketsrkei qklveekqqa
      781 iadlnsmeks fsdifkrlek qkealegyhk neevlkkcae dylarikkee qryqalkaha
      841 eeklqqanee iaqvrskaks etaalqatlr keqmriqsle rsleqktken deltkicddl
      901 ilkmekn
//
LOCUS       XP_041346514             337 aa            linear   VRT 06-MAY-2021
DEFINITION  protein YIPF7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041346514
VERSION     XP_041346514.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490580.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="protein YIPF7 isoform X1"
                     /calculated_mol_wt=35870
     Region          121..337
                     /region_name="YIP1"
                     /note="Rab GTPase interacting factor, Golgi membrane
                     protein [Intracellular trafficking and secretion];
                     cl46908"
                     /db_xref="CDD:481248"
     CDS             1..337
                     /gene="YIPF7"
                     /coded_by="XM_041490580.1:83..1096"
                     /db_xref="GeneID:121365948"
ORIGIN      
        1 mssfeqfhid fyqsnytied qeegcnsygs dknlcenrnm dvseechqaa ghkkaevpgs
       61 grgsgsgsvs pslwvplrnp gqprsdrqrg dtlwcpegte gswagrlchr gdagdigggs
      121 paekqpagga fvpsdmlpsp qrysgqilqp ayspdtppql gyvdgfdeep plleelginf
      181 ehiwqktltv lnpmkpadgs imnetdltgp mvfclalgat llmagkvhfg yvygmsamgc
      241 lamhallnlm svsgvshgcv asvlgycllp mvilsssavv fslqgipgtv lalfiigwcs
      301 lsaskiftsa lamegqqlli aypcallygl falltvf
//
LOCUS       XP_041346518             298 aa            linear   VRT 06-MAY-2021
DEFINITION  protein YIPF7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041346518
VERSION     XP_041346518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="protein YIPF7 isoform X2"
                     /calculated_mol_wt=31911
     Region          82..298
                     /region_name="YIP1"
                     /note="Rab GTPase interacting factor, Golgi membrane
                     protein [Intracellular trafficking and secretion];
                     cl46908"
                     /db_xref="CDD:481248"
     CDS             1..298
                     /gene="YIPF7"
                     /coded_by="XM_041490584.1:83..979"
                     /db_xref="GeneID:121365948"
ORIGIN      
        1 mssfeqfhid fyqsnytied qeegcnsygs dknlcenrkn pgqprsdrqr gdtlwcpegt
       61 egswagrlch rgdagdiggg spaekqpagg afvpsdmlps pqrysgqilq payspdtppq
      121 lgyvdgfdee pplleelgin fehiwqktlt vlnpmkpadg simnetdltg pmvfclalga
      181 tllmagkvhf gyvygmsamg clamhallnl msvsgvshgc vasvlgycll pmvilsssav
      241 vfslqgipgt vlalfiigwc slsaskifts alamegqqll iaypcallyg lfalltvf
//
LOCUS       XP_041346525             257 aa            linear   VRT 06-MAY-2021
DEFINITION  protein YIPF7 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041346525
VERSION     XP_041346525.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490591.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="protein YIPF7 isoform X3"
                     /calculated_mol_wt=27605
     Region          41..257
                     /region_name="YIP1"
                     /note="Rab GTPase interacting factor, Golgi membrane
                     protein [Intracellular trafficking and secretion];
                     cl46908"
                     /db_xref="CDD:481248"
     CDS             1..257
                     /gene="YIPF7"
                     /coded_by="XM_041490591.1:83..856"
                     /db_xref="GeneID:121365948"
ORIGIN      
        1 mssfeqfhid fyqsnytied qeegcnsygs dknlcenrks paekqpagga fvpsdmlpsp
       61 qrysgqilqp ayspdtppql gyvdgfdeep plleelginf ehiwqktltv lnpmkpadgs
      121 imnetdltgp mvfclalgat llmagkvhfg yvygmsamgc lamhallnlm svsgvshgcv
      181 asvlgycllp mvilsssavv fslqgipgtv lalfiigwcs lsaskiftsa lamegqqlli
      241 aypcallygl falltvf
//
LOCUS       XP_041346535            1130 aa            linear   VRT 06-MAY-2021
DEFINITION  atrial natriuretic peptide-converting enzyme isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346535
VERSION     XP_041346535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1130
                     /product="atrial natriuretic peptide-converting enzyme
                     isoform X1"
                     /calculated_mol_wt=126538
     Region          225..352
                     /region_name="CRD_corin_1"
                     /note="One of two cysteine-rich domains of the corin
                     protein, a type II transmembrane serine protease; cd07445"
                     /db_xref="CDD:143554"
     Site            order(234,236..237,240..242)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143554"
     Region          364..393
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(364,372,383..384)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(376,379,383,389..390)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            386..390
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          395..429
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(400,408,419..420)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(412,415,419,425..426)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            422..426
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          436..466
                     /region_name="Ldl_recept_a"
                     /note="Low-density lipoprotein receptor domain class A;
                     pfam00057"
                     /db_xref="CDD:395011"
     Site            order(437,445,456..457)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(449,452,456,462..463)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            459..463
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          476..503
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(486,489,493,499..500)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            496..500
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          540..661
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Site            order(548,550..551,554..556)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143549"
     Region          <716..738
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(721,724,728,734..735)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            731..735
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          741..775
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(746,754,765..766)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(758,761,765,771..772)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            768..772
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          799..882
                     /region_name="SRCR_2"
                     /note="Scavenger receptor cysteine-rich domain; cl02509"
                     /db_xref="CDD:470597"
     Region          890..1121
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            890
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(931,980,1073)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(1067,1093,1095)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..1130
                     /gene="CORIN"
                     /coded_by="XM_041490601.1:107..3499"
                     /db_xref="GeneID:121365965"
ORIGIN      
        1 mlstqqfpal paeeeryrqv lsasrvlgtd edtmgdgcsq klasakflrl lllilipcic
       61 alilllvill tfvgvlektc fysngserlt vngdfemspd llpnmvenss etdstvdlst
      121 qpsswtttpl shidqmnkns nifresfqen sfgpptqdtv lshqpaseta laegsedntr
      181 lfataeemtl wptdasfnnt ermttlpils pthpsmsqkm dqkksacrni tnsqcqmlpy
      241 nyttvtsvls ivksiemekf lkffsylnrl ncyqhimlfg cslalpecis dgddsrgllp
      301 crtfceaake gcepvlgmvn aswpdflkcs qfqnktendt ttrvcfsphq ekgkqslcgg
      361 eesflcasgi cipgklqcng yndcddwsde vhcncstdvf rcetgkclny tfvcdgyddc
      421 gdlsdeqncd cnpvthhqcg egrcitadwv cdgdhdcidk sdeincschs qglvecrngq
      481 cipsafqcdg dndckdgsde encsenqtlc qegdqrcssc pdpcgaspce mrnsqancsq
      541 cepitlelcm nlpynytyyp nylghrtqke asiswesslf palvqtncyk ylmffactil
      601 vpkcdphtnq rippcrtlcv qskerceavl givglqwped tdctqfpden sdnqtcltpd
      661 edveecspsh fkcrsgrcvl asrrcdgqad ceddsdedsc gcrerglwec plkklcikht
      721 micdgfpdcp dmmdekncsf cdeselecan hecvprelwc dgqadctdss dewdcvtlsk
      781 nrnslmlltv hrsaadnhvc adewqenlsq lacnqmglgg pskteivies eemrdqkwln
      841 lhpdwknkna stlhallvng qtcqsrskva lfctkeecgr rpaarmskri lggrtsrpgr
      901 wpwqcslqse psghicgcvl iarrwvltva hcfegrenaa vwkvvfgisn ldhptsfmqt
      961 rqvrtiilhp rynravvdyd isiveldedi netsyvrpvc lpsknqlvqp dtycyitgwg
     1021 hmgnkmpfkl qegevriisl eqcqsyfdmk iitsrmlcag yesgtvdscm gdsggplvce
     1081 htaghwtlfg ltswgsvcfs kvlgpgvysn vshfiewier qiyihtflln
//
LOCUS       XP_041346543            1097 aa            linear   VRT 06-MAY-2021
DEFINITION  atrial natriuretic peptide-converting enzyme isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041346543
VERSION     XP_041346543.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490609.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1097
                     /product="atrial natriuretic peptide-converting enzyme
                     isoform X2"
                     /calculated_mol_wt=122817
     Region          192..319
                     /region_name="CRD_corin_1"
                     /note="One of two cysteine-rich domains of the corin
                     protein, a type II transmembrane serine protease; cd07445"
                     /db_xref="CDD:143554"
     Site            order(201,203..204,207..209)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143554"
     Region          331..360
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(331,339,350..351)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(343,346,350,356..357)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            353..357
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          362..396
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(367,375,386..387)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(379,382,386,392..393)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            389..393
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          403..433
                     /region_name="Ldl_recept_a"
                     /note="Low-density lipoprotein receptor domain class A;
                     pfam00057"
                     /db_xref="CDD:395011"
     Site            order(404,412,423..424)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(416,419,423,429..430)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            426..430
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          443..470
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(453,456,460,466..467)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            463..467
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          507..628
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Site            order(515,517..518,521..523)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143549"
     Region          <683..705
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(688,691,695,701..702)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            698..702
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          708..742
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(713,721,732..733)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(725,728,732,738..739)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            735..739
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          766..849
                     /region_name="SRCR_2"
                     /note="Scavenger receptor cysteine-rich domain; cl02509"
                     /db_xref="CDD:470597"
     Region          857..1088
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            857
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(898,947,1040)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(1034,1060,1062)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..1097
                     /gene="CORIN"
                     /coded_by="XM_041490609.1:45..3338"
                     /db_xref="GeneID:121365965"
ORIGIN      
        1 mgdgcsqkla sakflrllll ilipcicali lllvilltfv gvlektcfys ngserltvng
       61 dfemspdllp nmvenssetd stvdlstqps swtttplshi dqmnknsnif resfqensfg
      121 pptqdtvlsh qpasetalae gsedntrlfa taeemtlwpt dasfnnterm ttlpilspth
      181 psmsqkmdqk ksacrnitns qcqmlpynyt tvtsvlsivk siemekflkf fsylnrlncy
      241 qhimlfgcsl alpecisdgd dsrgllpcrt fceaakegce pvlgmvnasw pdflkcsqfq
      301 nktendtttr vcfsphqekg kqslcggees flcasgicip gklqcngynd cddwsdevhc
      361 ncstdvfrce tgkclnytfv cdgyddcgdl sdeqncdcnp vthhqcgegr citadwvcdg
      421 dhdcidksde incschsqgl vecrngqcip safqcdgdnd ckdgsdeenc senqtlcqeg
      481 dqrcsscpdp cgaspcemrn sqancsqcep itlelcmnlp ynytyypnyl ghrtqkeasi
      541 swesslfpal vqtncykylm ffactilvpk cdphtnqrip pcrtlcvqsk erceavlgiv
      601 glqwpedtdc tqfpdensdn qtcltpdedv eecspshfkc rsgrcvlasr rcdgqadced
      661 dsdedscgcr erglwecplk klcikhtmic dgfpdcpdmm dekncsfcde selecanhec
      721 vprelwcdgq adctdssdew dcvtlsknrn slmlltvhrs aadnhvcade wqenlsqlac
      781 nqmglggpsk teivieseem rdqkwlnlhp dwknknastl hallvngqtc qsrskvalfc
      841 tkeecgrrpa armskrilgg rtsrpgrwpw qcslqsepsg hicgcvliar rwvltvahcf
      901 egrenaavwk vvfgisnldh ptsfmqtrqv rtiilhpryn ravvdydisi veldedinet
      961 syvrpvclps knqlvqpdty cyitgwghmg nkmpfklqeg evriisleqc qsyfdmkiit
     1021 srmlcagyes gtvdscmgds ggplvcehta ghwtlfglts wgsvcfskvl gpgvysnvsh
     1081 fiewierqiy ihtflln
//
LOCUS       XP_041346558             222 aa            linear   VRT 06-MAY-2021
DEFINITION  grpE protein homolog 1, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041346558
VERSION     XP_041346558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="grpE protein homolog 1, mitochondrial"
                     /calculated_mol_wt=24653
     Region          77..218
                     /region_name="GrpE"
                     /note="nucleotide exchange factor GrpE; cd00446"
                     /db_xref="CDD:271355"
     Region          77..127
                     /region_name="2-helical coiled coil"
                     /note="2-helical coiled coil [structural motif]"
                     /db_xref="CDD:271355"
     Site            order(79,82..83,86..87,89..90,93..95,97,100..101,104..105,
                     108..109,111..112,115..117,119..123,125..126,148..149,
                     151..153,156,162..163)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:271355"
     Site            order(95,103,125,128,175,177..178,180..184,200,209,213,
                     215,218)
                     /site_type="other"
                     /note="Hsp70 (ATPase domain) interactions [polypeptide
                     binding]"
                     /db_xref="CDD:271355"
     Region          148..163
                     /region_name="2-helical coiled coil"
                     /note="2-helical coiled coil [structural motif]"
                     /db_xref="CDD:271355"
     CDS             1..222
                     /gene="GRPEL1"
                     /coded_by="XM_041490624.1:65..733"
                     /db_xref="GeneID:121365974"
ORIGIN      
        1 maavaqcvrg alrprlplls valrtsprll caatqqkntg qnleedqgqs qneqkvepst
       61 aekllaeeka kleeqlkevt ekykralada envrqrsqkl veeaklygiq sfckdlleva
      121 dilekatesv pkeeikddnp hlkslyeglv mtevqiqkvf kkhgllrlnp vgakfdpyeh
      181 ealfhtpveg qepgtialvs kigyklhgrt lrpalvgvvk dp
//
LOCUS       XP_041346569             339 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041346569
VERSION     XP_041346569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
                     1 isoform X1"
                     /calculated_mol_wt=38076
     Region          57..282
                     /region_name="Rib_hydrolayse"
                     /note="ADP-ribosyl cyclase; pfam02267"
                     /db_xref="CDD:460517"
     Site            order(126..128,131,147..148,157,190,223,228)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:212498"
     CDS             1..339
                     /gene="CD38"
                     /coded_by="XM_041490635.1:220..1239"
                     /db_xref="GeneID:121365982"
ORIGIN      
        1 mplqqgsara rqrtvllvgi avllaalvla vvlasllthg rheitpqmlk wkdrgttknl
       61 qevilgrcyn yitaqhpelg dkdclkiwes lkdafiyknp cnitpedyqp lmelashpip
      121 cnkslfwskt gdlvhrytks nqnfltledt llgymadris wcgdpsapgi nyescpkrne
      181 cesnpgsvfw kmaskmfaea acgvvqvmln gsveagafrs ssifgsieif nldpdkvtev
      241 hiwlmqnigg pqsescsgqs iqrlisilee rnfkiicedn yrylgrlpdt qnsdpqtssc
      301 ikvlsrknrk mrsasvqehs qnclmeppwk kshnffpma
//
LOCUS       XP_041346578             308 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041346578
VERSION     XP_041346578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490644.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..308
                     /product="ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
                     1 isoform X2"
                     /calculated_mol_wt=34332
     Region          57..286
                     /region_name="Rib_hydrolayse"
                     /note="ADP-ribosyl cyclase; pfam02267"
                     /db_xref="CDD:460517"
     Site            order(126..128,131,147..148,157,190,223,228)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:212498"
     CDS             1..308
                     /gene="CD38"
                     /coded_by="XM_041490644.1:220..1146"
                     /db_xref="GeneID:121365982"
ORIGIN      
        1 mplqqgsara rqrtvllvgi avllaalvla vvlasllthg rheitpqmlk wkdrgttknl
       61 qevilgrcyn yitaqhpelg dkdclkiwes lkdafiyknp cnitpedyqp lmelashpip
      121 cnkslfwskt gdlvhrytks nqnfltledt llgymadris wcgdpsapgi nyescpkrne
      181 cesnpgsvfw kmaskmfaea acgvvqvmln gsveagafrs ssifgsieif nldpdkvtev
      241 hiwlmqnigg pqsescsgqs iqrlisilee rnfkiicedn yrpvqllqcv hnpdhtdcrl
      301 ctnssaip
//
LOCUS       XP_041346587             305 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041346587
VERSION     XP_041346587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
                     1 isoform X3"
                     /calculated_mol_wt=33836
     Region          57..284
                     /region_name="Rib_hydrolayse"
                     /note="ADP-ribosyl cyclase; pfam02267"
                     /db_xref="CDD:460517"
     Site            order(126..128,131,147..148,157,190,223,228)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:212498"
     CDS             1..305
                     /gene="CD38"
                     /coded_by="XM_041490653.1:220..1137"
                     /db_xref="GeneID:121365982"
ORIGIN      
        1 mplqqgsara rqrtvllvgi avllaalvla vvlasllthg rheitpqmlk wkdrgttknl
       61 qevilgrcyn yitaqhpelg dkdclkiwes lkdafiyknp cnitpedyqp lmelashpip
      121 cnkslfwskt gdlvhrytks nqnfltledt llgymadris wcgdpsapgi nyescpkrne
      181 cesnpgsvfw kmaskmfaea acgvvqvmln gsveagafrs ssifgsieif nldpdkvtev
      241 hiwlmqnigg pqsescsgqs iqrlisilee rnfkiicedn yspacparkg lrtksltsss
      301 snvkf
//
LOCUS       XP_041346595             288 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041346595
VERSION     XP_041346595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
                     1 isoform X4"
                     /calculated_mol_wt=32059
     Region          57..283
                     /region_name="Rib_hydrolayse"
                     /note="ADP-ribosyl cyclase; pfam02267"
                     /db_xref="CDD:460517"
     Site            order(126..128,131,147..148,157,190,223,228)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:212498"
     CDS             1..288
                     /gene="CD38"
                     /coded_by="XM_041490661.1:220..1086"
                     /db_xref="GeneID:121365982"
ORIGIN      
        1 mplqqgsara rqrtvllvgi avllaalvla vvlasllthg rheitpqmlk wkdrgttknl
       61 qevilgrcyn yitaqhpelg dkdclkiwes lkdafiyknp cnitpedyqp lmelashpip
      121 cnkslfwskt gdlvhrytks nqnfltledt llgymadris wcgdpsapgi nyescpkrne
      181 cesnpgsvfw kmaskmfaea acgvvqvmln gsveagafrs ssifgsieif nldpdkvtev
      241 hiwlmqnigg pqsescsgqs iqrlisilee rnfkiicedn yrstakia
//
LOCUS       XP_041346606             297 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor-binding protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041346606
VERSION     XP_041346606.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041490672.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..297
                     /product="fibroblast growth factor-binding protein 1"
                     /calculated_mol_wt=33356
     Region          68..294
                     /region_name="FGF-BP1"
                     /note="FGF binding protein 1 (FGF-BP1); pfam06473"
                     /db_xref="CDD:461927"
     CDS             1..297
                     /gene="FGFBP1"
                     /coded_by="XM_041490672.1:1..894"
                     /db_xref="GeneID:121366007"
ORIGIN      
        1 mnmyympslc gepkachcly krgaalprss gssergelhq elclgvpeps arqktsrtkt
       61 mriksfgllc vlmlvsqmll ascerqkerk kgrqgiergg kkpkesnqen ekeqkskggk
      121 hpkgkfetke naectwsvmd tsavtvhvqc khgdsefwce fsgdpsscaq yaanqksywk
      181 qvsrslkkqk qicqdpnsvl ksklcrkgpq sahlrlthss lltavglgke ntmhhtqevv
      241 qtpadasvte krlehspqdc vedvdyidqk kvaeeycpes llsfcnffit mvqdkrc
//
LOCUS       XP_041313999             583 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatocyte growth factor activator [Pyrgilauda ruficollis].
ACCESSION   XP_041313999
VERSION     XP_041313999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458065.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..583
                     /product="hepatocyte growth factor activator"
                     /calculated_mol_wt=65117
     Region          43..89
                     /region_name="FN2"
                     /note="Fibronectin type 2 domain; smart00059"
                     /db_xref="CDD:128373"
     Site            order(53,55,60,73,80,86,88)
                     /site_type="active"
                     /note="putative gelatin-binding site [active]"
                     /db_xref="CDD:238019"
     Region          98..134
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          137..176
                     /region_name="FN1"
                     /note="Fibronectin type 1 domain, approximately 40 residue
                     long with two conserved disulfide bridges. FN1 is one of
                     three types of internal repeats which combine to form
                     larger domains within fibronectin. Fibronectin, a plasma
                     protein that binds cell surfaces...; cd00061"
                     /db_xref="CDD:238018"
     Region          222..303
                     /region_name="Kringle"
                     /note="Kringle domain; pfam00051"
                     /db_xref="CDD:395005"
     Site            231
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(246,259,284,286,295)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          340..576
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            340
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(379,429,530)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(524,549,551)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..583
                     /gene="HGFAC"
                     /coded_by="XM_041458065.1:4..1755"
                     /db_xref="GeneID:121366017"
ORIGIN      
        1 mkvcapltvv lalslssgca rmhykseagr gsrhgftrpq vftedghlck fpfrfggrfy
       61 htclsnlfsr kkwcstthnf drdrrwghcd llprdhsdhc adnpcqnggt cslshghrmy
      121 hctcpeeftg edcqlkkcfd nslyeffdvg aswsrvqqga veqckcvhgq mecvpvehks
      181 cvhdpcmngg eckmvastgk ivcdckenya gkycnivpsq rcyigngtdy rgtakttisg
      241 hsclpwnsdl lyqelhvdsi gkavqlglgp fpycrnpddd dkpwcyimkd nslswaycdi
      301 ptcasrerrp lvpdkvdssa stkrpcgrrh kkrsfvrpri vggssslpgs hpwtaaiyig
      361 esfcggslvq tcwvvsaahc fansplksti rvvlgqqifn kttdvtqtfe iekyilhpqy
      421 svfnptehdi aliklkkngq rcavksqfvq piclpesntv fpdqlkcqis gwghkhenis
      481 gysdvlqetl vplipeekcr speiygtelt enmfcagyfd sksdacqgds ggplaceend
      541 isylygiisw gdgcgrvnkp gvytrvtnyv kwinekiapr kts
//
LOCUS       XP_041314011             217 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane emp24 domain-containing protein 11-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314011
VERSION     XP_041314011.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458077.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="transmembrane emp24 domain-containing protein
                     11-like"
                     /calculated_mol_wt=25036
     Region          19..212
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..217
                     /gene="LOC121348475"
                     /coded_by="XM_041458077.1:74..727"
                     /db_xref="GeneID:121348475"
ORIGIN      
        1 mkskligflm nfwisfsfal yfhagereek ciiedipsdt lvvgnykvqr wdihthdfle
       61 sapglgmfvt vtiptgeill sklygpqgtf tftsyisgeh iicfqsnstr faviagsklr
      121 ihldirvgeh fldesaiqak dkvnevsirl ehlveqihhv treqdyerer eekfrktsee
      181 tnsnilwwai vqtlilisvg iwqikslrdf fiskklv
//
LOCUS       XP_041314024              95 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-P [Pyrgilauda ruficollis].
ACCESSION   XP_041314024
VERSION     XP_041314024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..95
                     /product="protein S100-P"
                     /calculated_mol_wt=10572
     Region          2..89
                     /region_name="S-100"
                     /note="S-100 domain, which represents the largest family
                     within the superfamily of proteins carrying the Ca-binding
                     EF-hand motif. Note that this S-100 hierarchy contains
                     only S-100 EF-hand domains, other EF-hands have been
                     modeled separately. S100 proteins are...; cd00213"
                     /db_xref="CDD:238131"
     Site            order(2..19,25..27,36..37,39..41,69..72,74..75,77..80,
                     82..89)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(19,24,27,32..33,62,64,66,68,70,73)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..95
                     /gene="LOC121348483"
                     /coded_by="XM_041458090.1:1..288"
                     /db_xref="GeneID:121348483"
ORIGIN      
        1 msqletamgm tiavfdqyar tdgnrqtlsk aelktlleke lpnflasgkd knaidkvfkn
       61 ldengdsqvd fkefvifvas ltccchkyfq qnaak
//
LOCUS       XP_041314035             302 aa            linear   VRT 06-MAY-2021
DEFINITION  probable E3 SUMO-protein ligase RNF212 [Pyrgilauda ruficollis].
ACCESSION   XP_041314035
VERSION     XP_041314035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="probable E3 SUMO-protein ligase RNF212"
                     /calculated_mol_wt=33426
     Region          5..51
                     /region_name="RING-HC_RNF212"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 212 (RNF212) and similar proteins; cd16746"
                     /db_xref="CDD:438404"
     Region          23..>173
                     /region_name="RAD18"
                     /note="RING-finger-containing E3 ubiquitin ligase [Signal
                     transduction mechanisms]; COG5432"
                     /db_xref="CDD:227719"
     CDS             1..302
                     /gene="RNF212"
                     /coded_by="XM_041458101.1:269..1177"
                     /db_xref="GeneID:121348492"
ORIGIN      
        1 mavlvfcnsc lseprtpapr fyltscghvf cdvclkkgkk declvcrrac rtvvlskets
       61 pdiqslfmpi evlgkkyske isqvsefqer yrkrllkhhk ekiakleesl kkvtqqiqqi
      121 qcmkppektt plpfsstsrn psipsrkqsv yssyslhlsr pstsetmeam eidpvpspmr
      181 kletptgptr lsvitppqdg hmgsisyrss qialikpsqs igtgstrstp vvrlphsscp
      241 sssgsqsslr gswansdfrt pqlypftsps pqlplsrqpi tlsgllqrqq gstnlggrsa
      301 er
//
LOCUS       XP_041314049             127 aa            linear   VRT 06-MAY-2021
DEFINITION  fatty acid-binding protein, liver [Pyrgilauda ruficollis].
ACCESSION   XP_041314049
VERSION     XP_041314049.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458115.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..127
                     /product="fatty acid-binding protein, liver"
                     /calculated_mol_wt=14137
     Region          2..127
                     /region_name="FABP1"
                     /note="fatty acid-binding protein 1; cd19444"
                     /db_xref="CDD:381219"
     Site            order(3,15,18..19,22,28..29,31..32,35,37,39,41,48,50,52,
                     54..57,59,61,63,71..74,91,93,100,102,109,111,113,122,124)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381219"
     CDS             1..127
                     /gene="FABP1"
                     /coded_by="XM_041458115.1:10..393"
                     /db_xref="GeneID:121348499"
ORIGIN      
        1 msftgkyelq hqenfepfmr alglpedqiq kgkdlksise ivqdgkkftv tvttgskvmk
       61 nqftigeese ielmtgekvk avvqmegnnk lvtqvkgmks vtelngdtit ytmtmgdltl
      121 krvskri
//
LOCUS       XP_041314062            1354 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM193A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314062
VERSION     XP_041314062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458128.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1354
                     /product="protein FAM193A isoform X1"
                     /calculated_mol_wt=150936
     Region          <796..873
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1298..1353
                     /region_name="FAM193_C"
                     /note="FAM193 family C-terminal; pfam15914"
                     /db_xref="CDD:464940"
     CDS             1..1354
                     /gene="FAM193A"
                     /coded_by="XM_041458128.1:141..4205"
                     /db_xref="GeneID:121348507"
ORIGIN      
        1 mlhlplwvcp dcrrtvekee rhatieqslv sqdfllhmpl gnsgsqqesv gggritvgaq
       61 tvpaadlsns spsdiacnce acnerrensa eperepqqlq nywsevrymv rciyrqagtp
      121 laddqdqslv pdkegmkelv drlcerdpyq lyqrleqqar eyvlemkvrl lrhlslgskv
      181 astlategpp qaqqfislll eeysalcqaa ctisaflvtl enehlkkfqv twelhnkhlf
      241 enlvfsepll qnslptlvsq lrlgtthdsc sedmystllq ryhqleqemg qvaeawlecq
      301 kriddyvdeq lnnkkalsge nnftdtmrhm lssrlsmpdc pncnyrrrct cddcslshil
      361 tcgimdspit ddihinqlpl qidsapdyls eirppsmssa ssgsgssspi tiqqhprlil
      421 tdngsaptfg sddddvapls akfadiypln nyddaevvan mngihselng sgenmalkde
      481 spqvsstsss sseaddeead gessgeppgt qkeemslgkr alrkdetkmd spppsypsqq
      541 adqgpnacec hvckqeasgl tvsalatgrl paghqfmnpe kpahpalhly phihghiplh
      601 tiphlprpli hptlytaspf thnkalppap vqnhtnkhqv fnaslqdhiy pscfgstpdw
      661 nsskfislwg sevmndknwn patflpdtip gsdilapals eirpealptt ssnettavtd
      721 skekknaakk kclynfqdaf meankvvmat ssatssvsct attvqsssnq fkvsskrpss
      781 igevfhnink edhrhsapva prnsptslas lpslspaals pastphlpnl aapsfpktaa
      841 tapgfvdphs glcpttvapp tsttdssvsa ppsvcsdpdc eghrcensnt ydhqqydgee
      901 sqdedscseh ssstststnq kegkycdccy ceffghggpp aaptsrnyae mreklrlrlt
      961 krkeeqpkkp dqiseresvv dhrkvedllq finssetkpv sssraakrar hkqrkleeka
     1021 rleaearere hhqlleeqrr reeeeeerlk qelqrlqelq qlravkkkkk ertskdcpka
     1081 elltrncqav kepvpntped iqngtleqse kietsagsvs rhvnhteqrp vletgcelss
     1141 pvstrdskll yqkegtvkqh eplsflldim hqhkegnskq klkqmnkqcv eqvkkpvesp
     1201 kaaeiqtktr nqieskakaa elptlaepkk dekklnnsnk kqlnhvkeek apitsecpsp
     1261 seqqqnnkli ladspqpkgk nkknkkkkgd kvnnsiddvf lpkdidldsv emdetereve
     1321 yfkrfcldsa rqtrqrlsin wsnfslkktt faah
//
LOCUS       XP_041314071            1380 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM193A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314071
VERSION     XP_041314071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1380
                     /product="protein FAM193A isoform X2"
                     /calculated_mol_wt=154353
     Region          <677..897
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <822..899
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1324..1379
                     /region_name="FAM193_C"
                     /note="FAM193 family C-terminal; pfam15914"
                     /db_xref="CDD:464940"
     CDS             1..1380
                     /gene="FAM193A"
                     /coded_by="XM_041458137.1:219..4361"
                     /db_xref="GeneID:121348507"
ORIGIN      
        1 mlhlplwvcp dcrrtvekee rhatieqslv sqdfllhmpl gnsgsqqesv gggritvgaq
       61 tvpaadlsns spsdiacnce acnerrensa eperepqqlq nywsevrymv rciyrqagtp
      121 laddqdqslv pdkegmkelv drlcerdpyq lyqrleqqar eyvlemkvrl lrhlslgskv
      181 astlategpp qaqqfislll eeysalcqaa ctisaflvtl enehlkkfqv twelhnkhlf
      241 enlvfsepll qnslptlvsq lrlgtthdsc sedmystllq ryhqleqemg qvaeawlecq
      301 kriddyvdeq mamktkqrml kedweffkqr rfieeqlnnk kalsgennft dtmrhmlssr
      361 lsmpdcpncn yrrrctcddc slshiltcgi mdspitddih inqlplqids apdylseirp
      421 psmssassgs gssspitiqq hprliltdng saptfgsddd dvaplsakfa diyplnnydd
      481 aevvanmngi hselngsgen malkdespqv sstsssssea ddeeadgess geppgtqkee
      541 mslgkralrk detkmdsppp sypsqqadqg pnacechvck qeasgltvsa latgrlpagh
      601 qfmnpekpah palhlyphih ghiplhtiph lprplihptl ytaspfthnk alppapvqnh
      661 tnkhqvfnas lqdhiypscf gstpdwnssk fislwgsevm ndknwnpatf lpdtipgsdi
      721 lapalseirp ealpttssne ttavtdskek knaakkkcly nfqdafmean kvvmatssat
      781 ssvsctattv qsssnqfkvs skrpssigev fhninkedhr hsapvaprns ptslaslpsl
      841 spaalspast phlpnlaaps fpktaatapg fvdphsglcp ttvapptstt dssvsappsv
      901 csdpdceghr censntydhq qydgeesqde dscsehssst ststnqkegk ycdccyceff
      961 ghggppaapt srnyaemrek lrlrltkrke eqpkkpdqis eresvvdhrk vedllqfins
     1021 setkpvsssr aakrarhkqr kleekarlea earerehhql leeqrrreee eeerlkqelq
     1081 rlqelqqlra vkkkkkerts kdcpkaellt rncqavkepv pntpediqng tleqsekiet
     1141 sagsvsrhvn hteqrpvlet gcelsspvst rdskllyqke gtvkqhepls flldimhqhk
     1201 egnskqklkq mnkqcveqvk kpvespkaae iqtktrnqie skakaaelpt laepkkdekk
     1261 lnnsnkkqln hvkeekapit secpspseqq qnnklilads pqpkgknkkn kkkkgdkvnn
     1321 siddvflpkd idldsvemde tereveyfkr fcldsarqtr qrlsinwsnf slkkttfaah
//
LOCUS       XP_041314087             493 aa            linear   VRT 06-MAY-2021
DEFINITION  BEN domain-containing protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041314087
VERSION     XP_041314087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="BEN domain-containing protein 4"
                     /calculated_mol_wt=54486
     Region          280..338
                     /region_name="cc_RasGRP1_C"
                     /note="C-terminal coiled-coil domain of RAS
                     guanyl-releasing protein 1 (RasGRP1) and similar proteins;
                     cd22290"
                     /db_xref="CDD:412086"
     Site            order(282..285,288,291..292,295..296,298..299,302..303,
                     305..306,313,317,320..321,323)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:412086"
     Region          371..449
                     /region_name="BEN"
                     /note="The BEN domain is found in diverse animal proteins;
                     smart01025"
                     /db_xref="CDD:214981"
     CDS             1..493
                     /gene="BEND4"
                     /coded_by="XM_041458153.1:1..1482"
                     /db_xref="GeneID:121348512"
ORIGIN      
        1 meeemqpaee gpstpkiykq rgpysvlktf pgkraalakr yerptmvevp rgrgagqpfp
       61 haaeplpyap hgpfpngpar pgaapgaaqg hprppppaps ssgrygpcpa vaggggaels
      121 aesrmildaf aqqcsrvlsl lncggklldn nhsqsmisci kqenpnyser qeqcqlgkmv
      181 hsqtsdildi emqymqkkqq tsaflrvftd slqnyllsgs fpsqntssin dfshladvdp
      241 lsaspvhtlg gwtspatses hghpssstlp eeeeeeeeeg ycprcqeleq evislqqene
      301 elrrklesip vpcqtvldyl ktvlqhhnql mvpqpadhpt egskqllnny pvyitskqwd
      361 eavnsskkdg rrllrylirf vfttdelkys cglgkrkrsv qsgetgperr pldpvkvtcl
      421 refirmhcts npdwwmpsee qinkvfsdav gharqgravg tflhngssyy egtdhpgsqd
      481 evfnrgmqdg sgd
//
LOCUS       XP_041314098            1122 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G protein-coupled receptor A3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314098
VERSION     XP_041314098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1122
                     /product="adhesion G protein-coupled receptor A3"
                     /calculated_mol_wt=124775
     Region          52..144
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          166..219
                     /region_name="HRM"
                     /note="Hormone receptor domain; cl02422"
                     /db_xref="CDD:413313"
     Region          505..544
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          557..864
                     /region_name="7tmB2_GPR125"
                     /note="G protein-coupled receptor 125, member of the class
                     B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15999"
                     /db_xref="CDD:320665"
     Region          559..584
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320665"
     Site            order(564,568,613,616..617,620,627,634,717..718,720,722,
                     811,814,829,833)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320665"
     Region          596..618
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320665"
     Region          627..654
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320665"
     Region          675..695
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320665"
     Region          714..743
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320665"
     Region          792..819
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320665"
     Region          826..851
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320665"
     CDS             1..1122
                     /gene="ADGRA3"
                     /coded_by="XM_041458164.1:554..3922"
                     /db_xref="GeneID:121348522"
ORIGIN      
        1 mhqwlkerni tvretkcayp kslqsqtvtg vkqelltcep plelpsfymt pshrqvvfeg
       61 dslpfqcmas yidqdmqvlw yqdgkivetd esqgifvekn mihncslias altisniqag
      121 stgnwgchvq trrgnntrtv divvlessaq ycppervvnn kgdfrwprtl agitayllct
      181 rysagsgiyp gnsqderraw rrcdrggywa dedysrcqya ndvtrvlymf nqmplnltna
      241 vatarqllay tveaanfsdk mdvifvaemi ekfgrfaeky kelgdvmvdi asnimlader
      301 vlwmaqreak actrivqclq kiamyrlang aqvystyspn ialeayvika agftgmtctv
      361 fqkvatsdrt glsdygrrdp dgnldkqlsf kcnvsntlss lalkntivea siqlpaslfs
      421 qkqkreirpa desvyklqli afrngklfpa tgnstnladd gkrrtvvtpv iltkidgltv
      481 ashhvpinvt lrriahgada vaaqwdfdll ngqggwksdg crillsdeni ttmqcyslsn
      541 yavlmdltga elytqpadll hpviyatamv llmclliimv syiyhhsvir isvkswhmlv
      601 nlsfhifltc vvfiggitqt rnasicqavg iilhystlat vlwlgvtsrn iykqvtkkak
      661 rcqdpdeppp pprpmlrfyl igggipvivc gitaaanirn ygsrpnapyc wmawepslga
      721 fygpasfiif incmyflsif iqlkrhperk yelkepveeq qrlatnehge lahqdslsvs
      781 lvstsalene hsfpaqllgv gltlvlyvtl wifgalsisl yypmdlifsc ffgatclcls
      841 aflmvhhcin rddvrrawit tccpgrstys vqvnvppsss sgtngeapkc tnssaessct
      901 nksasslkns sqgckltnlq aaaaqchsts lplntgpqld nsltehsvdn dikmhvaple
      961 vqfrtnghps rhhknrskgh rasrlavlre yaydvptsve gsvqnglpks rqsnseghsr
     1021 srraylayre rqynqsqqes sdacstlpks srntektiat nnkkdilrkp iaaelenqqk
     1081 syglnlaiqn gplkssgqdg plltadstgn irtglwkhet tv
//
LOCUS       XP_041314107            1122 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G protein-coupled receptor A3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314107
VERSION     XP_041314107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1122
                     /product="adhesion G protein-coupled receptor A3"
                     /calculated_mol_wt=124775
     Region          52..144
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          166..219
                     /region_name="HRM"
                     /note="Hormone receptor domain; cl02422"
                     /db_xref="CDD:413313"
     Region          505..544
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          557..864
                     /region_name="7tmB2_GPR125"
                     /note="G protein-coupled receptor 125, member of the class
                     B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15999"
                     /db_xref="CDD:320665"
     Region          559..584
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320665"
     Site            order(564,568,613,616..617,620,627,634,717..718,720,722,
                     811,814,829,833)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320665"
     Region          596..618
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320665"
     Region          627..654
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320665"
     Region          675..695
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320665"
     Region          714..743
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320665"
     Region          792..819
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320665"
     Region          826..851
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320665"
     CDS             1..1122
                     /gene="ADGRA3"
                     /coded_by="XM_041458173.1:359..3727"
                     /db_xref="GeneID:121348522"
ORIGIN      
        1 mhqwlkerni tvretkcayp kslqsqtvtg vkqelltcep plelpsfymt pshrqvvfeg
       61 dslpfqcmas yidqdmqvlw yqdgkivetd esqgifvekn mihncslias altisniqag
      121 stgnwgchvq trrgnntrtv divvlessaq ycppervvnn kgdfrwprtl agitayllct
      181 rysagsgiyp gnsqderraw rrcdrggywa dedysrcqya ndvtrvlymf nqmplnltna
      241 vatarqllay tveaanfsdk mdvifvaemi ekfgrfaeky kelgdvmvdi asnimlader
      301 vlwmaqreak actrivqclq kiamyrlang aqvystyspn ialeayvika agftgmtctv
      361 fqkvatsdrt glsdygrrdp dgnldkqlsf kcnvsntlss lalkntivea siqlpaslfs
      421 qkqkreirpa desvyklqli afrngklfpa tgnstnladd gkrrtvvtpv iltkidgltv
      481 ashhvpinvt lrriahgada vaaqwdfdll ngqggwksdg crillsdeni ttmqcyslsn
      541 yavlmdltga elytqpadll hpviyatamv llmclliimv syiyhhsvir isvkswhmlv
      601 nlsfhifltc vvfiggitqt rnasicqavg iilhystlat vlwlgvtsrn iykqvtkkak
      661 rcqdpdeppp pprpmlrfyl igggipvivc gitaaanirn ygsrpnapyc wmawepslga
      721 fygpasfiif incmyflsif iqlkrhperk yelkepveeq qrlatnehge lahqdslsvs
      781 lvstsalene hsfpaqllgv gltlvlyvtl wifgalsisl yypmdlifsc ffgatclcls
      841 aflmvhhcin rddvrrawit tccpgrstys vqvnvppsss sgtngeapkc tnssaessct
      901 nksasslkns sqgckltnlq aaaaqchsts lplntgpqld nsltehsvdn dikmhvaple
      961 vqfrtnghps rhhknrskgh rasrlavlre yaydvptsve gsvqnglpks rqsnseghsr
     1021 srraylayre rqynqsqqes sdacstlpks srntektiat nnkkdilrkp iaaelenqqk
     1081 syglnlaiqn gplkssgqdg plltadstgn irtglwkhet tv
//
LOCUS       XP_041314119             871 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041314119
VERSION     XP_041314119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..871
                     /product="nucleolar protein 14"
                     /calculated_mol_wt=100432
     Region          26..860
                     /region_name="Nop14"
                     /note="Nop14-like family; pfam04147"
                     /db_xref="CDD:461196"
     CDS             1..871
                     /gene="NOP14"
                     /coded_by="XM_041458185.1:306..2921"
                     /db_xref="GeneID:121348535"
ORIGIN      
        1 mgkaakrkkk vsgpstakgp vksamavvks npfevkvnrq kfdilgrktk ndvglpgvsr
       61 skaikkrnqt llkeykerek tnvfkdkrfg eyntkitpee kmirrfaler qqnygkkniy
      121 nlnedeelth ygqslaeiek lndivdsdsd teergtlsae ltaahfgggg gllrkkvsse
      181 qqneeeekpk srkelieemi akskqekqer qtrresalel tekldkdwke iqtliahktp
      241 kserkdkeae kpkpdeydmi vrelgfemka kpserlktee elakeeqarl qkleadrlrr
      301 mrgideeank krpshmsadd ladgfildkd drrllsykdg kinieneeek eeegeeeeee
      361 egeeednene eesqeesase deeddaadgh sdiesdlese geaaenneem khkanenesq
      421 nvekldpkre aakselpytf avpesyetfk allagrtieq qliileriqk cnhpslavgn
      481 kakleklfgf lleyigelaa lgspelrtid klvlplynlc qmfpeaasds vkfilrdaah
      541 dleevievkg ratfpgldtl iylkivsllf ptsdfwhpvv tpafmymsql ltkcritalq
      601 dvikglficc lfleyvslsr rfvpelinfl lgvlhislpk nraqgytvvh pftpvgknle
      661 lllvcdkedl kswekqnvpl siltrlkets rteinhtrls clalcfdlik kcaalyeslp
      721 sfheimhpvr illtqhmpvn eypekmqewy hsalkelenk ekhytplice kkkpvplkqy
      781 tpkivkvlef gkkqagskke qerkqliqrh krelkgaire irkdnqylar mqlseimerd
      841 aarkrkvkel lgslatqege wkamkrkkwq n
//
LOCUS       XP_041314132             366 aa            linear   VRT 06-MAY-2021
DEFINITION  zygote arrest protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314132
VERSION     XP_041314132.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458198.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="zygote arrest protein 1"
                     /calculated_mol_wt=40968
     Region          269..350
                     /region_name="zf-3CxxC"
                     /note="Zinc-binding domain; pfam13695"
                     /db_xref="CDD:463958"
     CDS             1..366
                     /gene="ZAR1"
                     /coded_by="XM_041458198.1:1..1101"
                     /db_xref="GeneID:121348543"
ORIGIN      
        1 maeeamasyl ysayhpysyr ypppkgkgga aggwrprgsg ssyfsgygea aaeyfdnyqr
       61 aqlkailsqv npnltprlrk antkevgvqv nprqdasvqc slgprtllrr rpgpaaprpr
      121 eaeqelgspa ttntravrfp rtiavyspva srrltallee pspeperrpq qqdkaaavee
      181 epaalweqra aeaaavrasw ekppeggaep leqrpaeplg qrsaappeqa teasreepae
      241 paeppasaqk qqssagktrl rfqfleqkyg yyhckacnir wesayvwcvq gtnkvyfrqf
      301 crtcqksynp yrveditcqs ckqtrctcpv kmrhvdpkrp hrqdlcgrck gkrlscdstf
      361 sfkyii
//
LOCUS       XP_041314147             274 aa            linear   VRT 06-MAY-2021
DEFINITION  histone RNA hairpin-binding protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041314147
VERSION     XP_041314147.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458213.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="histone RNA hairpin-binding protein-like"
                     /calculated_mol_wt=31347
     Region          128..197
                     /region_name="SLBP_RNA_bind"
                     /note="Histone RNA hairpin-binding protein RNA-binding
                     domain; pfam15247"
                     /db_xref="CDD:464587"
     CDS             1..274
                     /gene="LOC121348544"
                     /coded_by="XM_041458213.1:4655..5479"
                     /db_xref="GeneID:121348544"
ORIGIN      
        1 msfrqrsphg stksspqhpp rwaqarkrga dgkrrrqnep essvfeenep rpedsrldsf
       61 ttpegpgpls rcldwatave edemrtnvhk eiarhrrkll inefsrerks ssgssdskes
      121 tvtveletde vvlmrrqkqi nygkntiayd ryikevprch ripgvhprtp nkfkkysrrs
      181 wdqqiklwkv alhswdppte ggcdlqeicp vdlgemetes vgsnstesqt scqenddtcs
      241 gtptkvrhvd yqaegefdle vclseplkef dtvs
//
LOCUS       XP_041314154             274 aa            linear   VRT 06-MAY-2021
DEFINITION  histone RNA hairpin-binding protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041314154
VERSION     XP_041314154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="histone RNA hairpin-binding protein-like"
                     /calculated_mol_wt=31347
     Region          128..197
                     /region_name="SLBP_RNA_bind"
                     /note="Histone RNA hairpin-binding protein RNA-binding
                     domain; pfam15247"
                     /db_xref="CDD:464587"
     CDS             1..274
                     /gene="LOC121348544"
                     /coded_by="XM_041458220.1:4638..5462"
                     /db_xref="GeneID:121348544"
ORIGIN      
        1 msfrqrsphg stksspqhpp rwaqarkrga dgkrrrqnep essvfeenep rpedsrldsf
       61 ttpegpgpls rcldwatave edemrtnvhk eiarhrrkll inefsrerks ssgssdskes
      121 tvtveletde vvlmrrqkqi nygkntiayd ryikevprch ripgvhprtp nkfkkysrrs
      181 wdqqiklwkv alhswdppte ggcdlqeicp vdlgemetes vgsnstesqt scqenddtcs
      241 gtptkvrhvd yqaegefdle vclseplkef dtvs
//
LOCUS       XP_041314163             274 aa            linear   VRT 06-MAY-2021
DEFINITION  histone RNA hairpin-binding protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041314163
VERSION     XP_041314163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458229.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="histone RNA hairpin-binding protein-like"
                     /calculated_mol_wt=31347
     Region          128..197
                     /region_name="SLBP_RNA_bind"
                     /note="Histone RNA hairpin-binding protein RNA-binding
                     domain; pfam15247"
                     /db_xref="CDD:464587"
     CDS             1..274
                     /gene="LOC121348544"
                     /coded_by="XM_041458229.1:4606..5430"
                     /db_xref="GeneID:121348544"
ORIGIN      
        1 msfrqrsphg stksspqhpp rwaqarkrga dgkrrrqnep essvfeenep rpedsrldsf
       61 ttpegpgpls rcldwatave edemrtnvhk eiarhrrkll inefsrerks ssgssdskes
      121 tvtveletde vvlmrrqkqi nygkntiayd ryikevprch ripgvhprtp nkfkkysrrs
      181 wdqqiklwkv alhswdppte ggcdlqeicp vdlgemetes vgsnstesqt scqenddtcs
      241 gtptkvrhvd yqaegefdle vclseplkef dtvs
//
LOCUS       XP_041314174             274 aa            linear   VRT 06-MAY-2021
DEFINITION  histone RNA hairpin-binding protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041314174
VERSION     XP_041314174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="histone RNA hairpin-binding protein-like"
                     /calculated_mol_wt=31347
     Region          128..197
                     /region_name="SLBP_RNA_bind"
                     /note="Histone RNA hairpin-binding protein RNA-binding
                     domain; pfam15247"
                     /db_xref="CDD:464587"
     CDS             1..274
                     /gene="LOC121348544"
                     /coded_by="XM_041458240.1:4462..5286"
                     /db_xref="GeneID:121348544"
ORIGIN      
        1 msfrqrsphg stksspqhpp rwaqarkrga dgkrrrqnep essvfeenep rpedsrldsf
       61 ttpegpgpls rcldwatave edemrtnvhk eiarhrrkll inefsrerks ssgssdskes
      121 tvtveletde vvlmrrqkqi nygkntiayd ryikevprch ripgvhprtp nkfkkysrrs
      181 wdqqiklwkv alhswdppte ggcdlqeicp vdlgemetes vgsnstesqt scqenddtcs
      241 gtptkvrhvd yqaegefdle vclseplkef dtvs
//
LOCUS       XP_041314187             132 aa            linear   VRT 06-MAY-2021
DEFINITION  cytokine-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314187
VERSION     XP_041314187.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458253.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="cytokine-like protein 1"
                     /calculated_mol_wt=14594
     Region          21..127
                     /region_name="CYTL1"
                     /note="Cytokine-like protein 1; pfam15153"
                     /db_xref="CDD:434505"
     CDS             1..132
                     /gene="CYTL1"
                     /coded_by="XM_041458253.1:53..451"
                     /db_xref="GeneID:121348564"
ORIGIN      
        1 mkmllllval lsaallasaa pptcysrvla lskeitesfk elqtsktvds cvgtlprlyl
       61 dihnycvlak lrdfvaypgc drvvevnelk ekarslytil isycrrdlvf ltddcnalei
      121 pisppiehst es
//
LOCUS       XP_041314200             288 aa            linear   VRT 06-MAY-2021
DEFINITION  N-acetylaspartate synthetase [Pyrgilauda ruficollis].
ACCESSION   XP_041314200
VERSION     XP_041314200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="N-acetylaspartate synthetase"
                     /calculated_mol_wt=32758
     Region          158..274
                     /region_name="ArgA"
                     /note="N-acetylglutamate synthase or related
                     acetyltransferase, GNAT family [Amino acid transport and
                     metabolism]; COG1246"
                     /db_xref="CDD:440859"
     CDS             1..288
                     /gene="NAT8L"
                     /coded_by="XM_041458266.1:23..889"
                     /db_xref="GeneID:121348572"
ORIGIN      
        1 mhclspkmvc etkivaedhe sipgskkdti ivsssqmwps lagsppsppp pltppkedpr
       61 rdnvyirefh pseqevvrri fyegimerip ntafrglkqq pltqllygll avmcfvvtks
      121 flltcclpif lmgmryyfsr kvilhyldca lhtdmsdieq yymkppgscf wvavldgnvv
      181 givaargnee dntvelrrms vdsnyrgkgi akalgrkvle famlnnyssv vlgttavkma
      241 ahklyeslgf khvgvvehya lpgmtrslle rmffqvryhr yrlqlree
//
LOCUS       XP_041314213             418 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein I3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314213
VERSION     XP_041314213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="forkhead box protein I3"
                     /calculated_mol_wt=43735
     Region          151..250
                     /region_name="FH_FOX"
                     /note="Forkhead (FH) domain found in Forkhead box (FOX)
                     family of transcription factors and similar proteins;
                     cl00061"
                     /db_xref="CDD:469596"
     Site            order(159,177..178,181,200..201,203..204,207,214,224..226,
                     228)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410827"
     CDS             1..418
                     /gene="FOXI3"
                     /coded_by="XM_041458279.1:1..1257"
                     /db_xref="GeneID:121348578"
ORIGIN      
        1 msagelqqaq prasapaaap appqprsaqe apdmavycse nfsvypqpsl hppgaaaaas
       61 sgqraggyal gdygapanag ylwgmnspap ylqgppgaaa aaaaapflpp asygcsrggq
      121 lvgsppapgs psaggaelsw lslasqeell klvrppysys aliamaiqsa perkltlshi
      181 yqyvaenfpf ykrskagwqn sirhnlclnd cfrkvprded dpgkgnywtl dpncekmfdn
      241 gnfrrkrkrr sepnapstas aasslgglka eeerpipatg kpcgnspppe ldpspsardh
      301 pkssspssvi sstpsclstf fsgmsslsgg gsrltgglss dlhhrnfsag qlssgtftps
      361 ssssqevpsp dqlqrvagps payyssfhps sgsqgaqynh yynftvnsli ytrdgtev
//
LOCUS       XP_041314225             430 aa            linear   VRT 06-MAY-2021
DEFINITION  cholecystokinin receptor type A [Pyrgilauda ruficollis].
ACCESSION   XP_041314225
VERSION     XP_041314225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..430
                     /product="cholecystokinin receptor type A"
                     /calculated_mol_wt=48534
     Region          1..51
                     /region_name="CholecysA-Rec_N"
                     /note="Cholecystokinin A receptor, N-terminal; cl46368"
                     /db_xref="CDD:480708"
     Region          47..384
                     /region_name="7tmA_CCK-AR"
                     /note="cholecystokinin receptor type A, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15978"
                     /db_xref="CDD:320644"
     Region          47..73
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320644"
     Region          80..106
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320644"
     Site            order(102,105..106,118..123,125..126,129,174,176..180,210,
                     213..215,217..219,221..222,329,332..333,335..336,339,
                     351..352,354..356,359,362..363)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320644"
     Region          118..148
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320644"
     Region          161..182
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320644"
     Region          210..239
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320644"
     Region          309..339
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320644"
     Region          352..377
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320644"
     CDS             1..430
                     /gene="CCKAR"
                     /coded_by="XM_041458291.1:159..1451"
                     /db_xref="GeneID:121348585"
ORIGIN      
        1 meivdasifl gngsnitdfl cdiilendtf fcvddapyps kdlhqiiril lyclifllsv
       61 lgnilvitvl irnkrmrtvt ntfllslavs dlmlclfcmp ftlipnllkd fifgsavckt
      121 atyfmgvsvs vstfnlvais lerysaickp lqsrvwqtks halrviaatw cvsfiimspy
      181 piysklvpft kynnttanmc rllwpsdviq qswytflllt lflipgiimm vayglislel
      241 yrgikfdasq rkssrerris tcsakyedgd gcylnktkrk rkmplqqlsa mshnkiervr
      301 snsssanlma kklvirmlmv ivvlfficwt pifsvnawra fdtasadrrl sgapisfihl
      361 lsytsacvnp iiycfmnkrf rmaflatftc carqkppatr geaadeeegk ttraslskcs
      421 ythmsasapp
//
LOCUS       XP_041314236             712 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 14 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314236
VERSION     XP_041314236.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458302.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..712
                     /product="TBC1 domain family member 14 isoform X1"
                     /calculated_mol_wt=80246
     Region          417..649
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..712
                     /gene="TBC1D14"
                     /coded_by="XM_041458302.1:244..2382"
                     /db_xref="GeneID:121348595"
ORIGIN      
        1 maqrdesdgg qrypvtswak ttdvnlsnsl ngltfvgvld arvggsiqgl qnlssgtlrd
       61 lslpeygpgl lssaledchs lksvdsgipt leignpepvh csvlnvkrkq sepelvpdra
      121 fqsactlppy vpphsltaeh dhavrksstf prtgydtvkl ysptsktlnr sddisvcsvs
      181 slstelsttl svsnedildf vvtssssaiv nletdeahfs dvtlnssrds ndqsqqqych
      241 gtdadskrki lgpftnffar nlftrkqsar fekqndvrwk lfgkvplgen lqkdpkkihk
      301 eyeektgraq rplspkqnvr knldfeplst taliledrpa nlpakpaeea qkhrqqyeem
      361 vvqakkrelk eaqkrkkqle erckledsig navltwnnei lpnwetmccs rkvrelwwqg
      421 ippsvrgkvw slaignelni thelydicla rakekwrsls tggpeveced agfsaadrea
      481 slelikldis rtfpslcifq qggpyhdmlh silgaytcyr pdvgyvqgms fiaavlilnl
      541 dtadafiafs nllnkpcqma ffrvdhglml tyfaafevff eenlpklfah fkknnltpdi
      601 ylidwiftly skslpldlac rvwdvfcrdg eeflfrtalg ilklfedilt kmdfihiaqf
      661 ltklpedlps eefftsiaai qmqsrnkkwa qilaalqkdn remekgspsl kr
//
LOCUS       XP_041314246             688 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 14 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314246
VERSION     XP_041314246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="TBC1 domain family member 14 isoform X2"
                     /calculated_mol_wt=77578
     Region          417..625
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..688
                     /gene="TBC1D14"
                     /coded_by="XM_041458312.1:244..2310"
                     /db_xref="GeneID:121348595"
ORIGIN      
        1 maqrdesdgg qrypvtswak ttdvnlsnsl ngltfvgvld arvggsiqgl qnlssgtlrd
       61 lslpeygpgl lssaledchs lksvdsgipt leignpepvh csvlnvkrkq sepelvpdra
      121 fqsactlppy vpphsltaeh dhavrksstf prtgydtvkl ysptsktlnr sddisvcsvs
      181 slstelsttl svsnedildf vvtssssaiv nletdeahfs dvtlnssrds ndqsqqqych
      241 gtdadskrki lgpftnffar nlftrkqsar fekqndvrwk lfgkvplgen lqkdpkkihk
      301 eyeektgraq rplspkqnvr knldfeplst taliledrpa nlpakpaeea qkhrqqyeem
      361 vvqakkrelk eaqkrkkqle erckledsig navltwnnei lpnwetmccs rkvrelwwqg
      421 ippsvrgkvw slaignelni thelydicla rakekwrsls tggpeveced agfsaadrea
      481 slelikldis rtfpslcifq qvqgmsfiaa vlilnldtad afiafsnlln kpcqmaffrv
      541 dhglmltyfa afevffeenl pklfahfkkn nltpdiylid wiftlysksl pldlacrvwd
      601 vfcrdgeefl frtalgilkl fediltkmdf ihiaqfltkl pedlpseeff tsiaaiqmqs
      661 rnkkwaqila alqkdnreme kgspslkr
//
LOCUS       XP_041314255             413 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 14 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314255
VERSION     XP_041314255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458321.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="TBC1 domain family member 14 isoform X3"
                     /calculated_mol_wt=47490
     Region          118..350
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..413
                     /gene="TBC1D14"
                     /coded_by="XM_041458321.1:103..1344"
                     /db_xref="GeneID:121348595"
ORIGIN      
        1 meyeektgra qrplspkqnv rknldfepls ttaliledrp anlpakpaee aqkhrqqyee
       61 mvvqakkrel keaqkrkkql eerckledsi gnavltwnne ilpnwetmcc srkvrelwwq
      121 gippsvrgkv wslaigneln ithelydicl arakekwrsl stggpevece dagfsaadre
      181 aslelikldi srtfpslcif qqggpyhdml hsilgaytcy rpdvgyvqgm sfiaavliln
      241 ldtadafiaf snllnkpcqm affrvdhglm ltyfaafevf feenlpklfa hfkknnltpd
      301 iylidwiftl yskslpldla crvwdvfcrd geeflfrtal gilklfedil tkmdfihiaq
      361 fltklpedlp seefftsiaa iqmqsrnkkw aqilaalqkd nremekgsps lkr
//
LOCUS       XP_041314268             262 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein HMX1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041314268
VERSION     XP_041314268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="homeobox protein HMX1-like"
                     /calculated_mol_wt=27544
     Region          128..184
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..262
                     /gene="LOC121348607"
                     /coded_by="XM_041458334.1:1..789"
                     /db_xref="GeneID:121348607"
ORIGIN      
        1 mvqlgggrra ppapaappaf sidsilqpgp rrpareqgra rcalpeeeee eeeegegpee
       61 qdpskgssds gteplraegt srgllpeggd agsplpaeel ggprqpppre aggsgaengr
      121 ssaaggrkkt rtifsksqvf qlestfdvkr ylssseragl aaslhltetq vkiwfqnrrn
      181 klkrqmssep egqgpgpaep pgepqpptaa salsfpslyk dspllsrcll plpfpllcpg
      241 saipylclpg pgkhfslvdg dv
//
LOCUS       XP_041314305             146 aa            linear   VRT 06-MAY-2021
DEFINITION  OCIA domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314305
VERSION     XP_041314305.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458371.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..146
                     /product="OCIA domain-containing protein 2"
                     /calculated_mol_wt=16003
     Region          27..113
                     /region_name="OCIA"
                     /note="Ovarian carcinoma immunoreactive antigen (OCIA);
                     pfam07051"
                     /db_xref="CDD:462073"
     CDS             1..146
                     /gene="OCIAD2"
                     /coded_by="XM_041458371.1:203..643"
                     /db_xref="GeneID:121348629"
ORIGIN      
        1 mssetgqqgs qtppikqpgw pmlfcpmsqi qdreiarivk eckqesfwyr alplslgsml
       61 vtqgliskgi fsasprfgpy pkmalagvlg faigrmsymg eckkkfqkig iapfcpqqkr
      121 kchhtckeck aklgsnereg sspsta
//
LOCUS       XP_041314314             146 aa            linear   VRT 06-MAY-2021
DEFINITION  OCIA domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314314
VERSION     XP_041314314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..146
                     /product="OCIA domain-containing protein 2"
                     /calculated_mol_wt=16003
     Region          27..113
                     /region_name="OCIA"
                     /note="Ovarian carcinoma immunoreactive antigen (OCIA);
                     pfam07051"
                     /db_xref="CDD:462073"
     CDS             1..146
                     /gene="OCIAD2"
                     /coded_by="XM_041458380.1:206..646"
                     /db_xref="GeneID:121348629"
ORIGIN      
        1 mssetgqqgs qtppikqpgw pmlfcpmsqi qdreiarivk eckqesfwyr alplslgsml
       61 vtqgliskgi fsasprfgpy pkmalagvlg faigrmsymg eckkkfqkig iapfcpqqkr
      121 kchhtckeck aklgsnereg sspsta
//
LOCUS       XP_041314322             146 aa            linear   VRT 06-MAY-2021
DEFINITION  OCIA domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314322
VERSION     XP_041314322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..146
                     /product="OCIA domain-containing protein 2"
                     /calculated_mol_wt=16003
     Region          27..113
                     /region_name="OCIA"
                     /note="Ovarian carcinoma immunoreactive antigen (OCIA);
                     pfam07051"
                     /db_xref="CDD:462073"
     CDS             1..146
                     /gene="OCIAD2"
                     /coded_by="XM_041458388.1:276..716"
                     /db_xref="GeneID:121348629"
ORIGIN      
        1 mssetgqqgs qtppikqpgw pmlfcpmsqi qdreiarivk eckqesfwyr alplslgsml
       61 vtqgliskgi fsasprfgpy pkmalagvlg faigrmsymg eckkkfqkig iapfcpqqkr
      121 kchhtckeck aklgsnereg sspsta
//
LOCUS       XP_041314332             146 aa            linear   VRT 06-MAY-2021
DEFINITION  OCIA domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314332
VERSION     XP_041314332.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458398.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..146
                     /product="OCIA domain-containing protein 2"
                     /calculated_mol_wt=16003
     Region          27..113
                     /region_name="OCIA"
                     /note="Ovarian carcinoma immunoreactive antigen (OCIA);
                     pfam07051"
                     /db_xref="CDD:462073"
     CDS             1..146
                     /gene="OCIAD2"
                     /coded_by="XM_041458398.1:262..702"
                     /db_xref="GeneID:121348629"
ORIGIN      
        1 mssetgqqgs qtppikqpgw pmlfcpmsqi qdreiarivk eckqesfwyr alplslgsml
       61 vtqgliskgi fsasprfgpy pkmalagvlg faigrmsymg eckkkfqkig iapfcpqqkr
      121 kchhtckeck aklgsnereg sspsta
//
LOCUS       XP_041314344             845 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase nu [Pyrgilauda ruficollis].
ACCESSION   XP_041314344
VERSION     XP_041314344.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458410.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..845
                     /product="DNA polymerase nu"
                     /calculated_mol_wt=95624
     Region          184..402
                     /region_name="DNA_pol_P_Exo"
                     /note="DNA polymerase nu pseudo-exo; pfam18049"
                     /db_xref="CDD:465627"
     Region          446..837
                     /region_name="DNA_pol_A"
                     /note="DNA polymerase family A; pfam00476"
                     /db_xref="CDD:459825"
     CDS             1..845
                     /gene="POLN"
                     /coded_by="XM_041458410.1:7..2544"
                     /db_xref="GeneID:121348647"
ORIGIN      
        1 meqyigceis kvplsniaqr imtalqsipv eaqtnrennq stektkenkl gdkdahlrne
       61 kedcdsriat lkttvspekr tagqivrtvh mdeilgcqdt kmlscyqdsg fpkgeyqers
      121 lsveekalkd renkiviplk rrqnvstscs ektrrlhlnt cmflperrys ctpgqikssg
      181 kypcdisslg ceekskllat ieqaaafvit mifqdgssql nseqastssv kgvvvlvknq
      241 tdqpcppght stgytwnasn endkliylkt eqsslwereq eqvhkkfswq vlfqmlqckv
      301 piicfnakdf lrtllqihgn eiswkqvans vvldpriaaw linpsdtvps fecliqkyfe
      361 kpfskgaena dtgtlrnlsy qnlgvnlekl ynimmdlang lkaqglwnlf ctlelpliki
      421 lavmethkiy vnkqelkkts eilglrlkel eqeaheaage rflltsscql revlfdklkl
      481 htlceklhrt eiqqlvstse vvlnklqdlh plpkivleyr qvhkmkstyv dglrtcmkkg
      541 fvsstwnqtg tvtgrlsakh pniqgiskhp vtitkkqyik gkeedvitis prtlfvskkg
      601 ctflaadfsh ielriladls sepellklfq epeitdifst lasqwkgipi eqvkhadreq
      661 akrivysvvy gagkerladc lgitpvpasq fiesfmqkyk kvheftkkti eqcrnkgyvv
      721 simgrkrpla ninaqdyklr tqaerqavnf vvqgsaadlc kmamvkifas vvisptltar
      781 liaqihdell fevedsqiqe fsalvkrime slqqttslev plkvplkvil ttgkswgcmt
      841 elqem
//
LOCUS       XP_041314357             747 aa            linear   VRT 06-MAY-2021
DEFINITION  actin filament-associated protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314357
VERSION     XP_041314357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458423.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..747
                     /product="actin filament-associated protein 1 isoform X1"
                     /calculated_mol_wt=83167
     Region          161..267
                     /region_name="PH1_AFAP"
                     /note="Actin filament associated protein family Pleckstrin
                     homology (PH) domain, repeat 1; cd13306"
                     /db_xref="CDD:270116"
     Region          365..465
                     /region_name="PH2_AFAP"
                     /note="Actin filament associated protein family Pleckstrin
                     homology (PH) domain, repeat 2; cd13307"
                     /db_xref="CDD:270117"
     Region          601..>664
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     CDS             1..747
                     /gene="AFAP1"
                     /coded_by="XM_041458423.1:15..2258"
                     /db_xref="GeneID:121348652"
ORIGIN      
        1 mgflrnllkr sydqanrame elivelrlfl elldheylts tvrekkavit nillriqssk
       61 gleikehvqk qevanslpap pqmplpeipq qwlppdngpp plptsslpeg yyeeavplsp
      121 gkapeyitsn ydsdamsssy esydeeeedg kgkkmrhqwp seeasmdlvk dakicafllr
      181 kkrfgqwtkl lcvikenkll cyksskdqqp qmelflndcs ityipkdskk kkhelkishq
      241 gadalvlavq skeqaeqwlk vikdvcssct gavdsdgpls sspvhkvele kklsferpss
      301 dgegavengi tavcngkeqv krkkssktea kgtvtkvtgk kitkiiglgk kkpstdeqts
      361 saeedvptcg ylnvlsnnrw rerwcrvkdn klifhkdrtd lkthivsipl rgcevilgld
      421 skhpltfrll rngqevavle asssedmgrw igillaetgs stdpgalhyd yidvemtasv
      481 iqaakqtfcf mnrrvistnp yrgsaangya cpsgmalhyd dvpcingsfk gkkppvttng
      541 itgkartlns qpkkseavsc vkrtasnaeq ykygknrvea dakrlqskee ellkkkealr
      601 nrlaqlrker kdlraaievn agrktqvile dklkkleeec kqkeaervnl eleltevkes
      661 lkkalaggit lglaiepksg tsspqspifk hrtlenspis scdtsdtecs ipvnsaaalk
      721 rppssnnspc rghvlrkake wemkngt
//
LOCUS       XP_041314366             729 aa            linear   VRT 06-MAY-2021
DEFINITION  actin filament-associated protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314366
VERSION     XP_041314366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..729
                     /product="actin filament-associated protein 1 isoform X2"
                     /calculated_mol_wt=81032
     Region          143..249
                     /region_name="PH1_AFAP"
                     /note="Actin filament associated protein family Pleckstrin
                     homology (PH) domain, repeat 1; cd13306"
                     /db_xref="CDD:270116"
     Region          347..447
                     /region_name="PH2_AFAP"
                     /note="Actin filament associated protein family Pleckstrin
                     homology (PH) domain, repeat 2; cd13307"
                     /db_xref="CDD:270117"
     Region          523..>646
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          580..634
                     /region_name="Atg16_CCD"
                     /note="Coiled-coiled domain of autophagy-related 16
                     (Atg16) family proteins; cl46300"
                     /db_xref="CDD:480640"
     CDS             1..729
                     /gene="AFAP1"
                     /coded_by="XM_041458432.1:119..2308"
                     /db_xref="GeneID:121348652"
ORIGIN      
        1 meelivelrl flelldheyl tstvrekkav itnillriqs skgleikehv qkqevanslp
       61 appqmplpei pqqwlppdng ppplptsslp egyyeeavpl spgkapeyit snydsdamss
      121 syesydeeee dgkgkkmrhq wpseeasmdl vkdakicafl lrkkrfgqwt kllcvikenk
      181 llcyksskdq qpqmelflnd csityipkds kkkkhelkis hqgadalvla vqskeqaeqw
      241 lkvikdvcss ctgavdsdgp lssspvhkve lekklsferp ssdgegaven gitavcngke
      301 qvkrkksskt eakgtvtkvt gkkitkiigl gkkkpstdeq tssaeedvpt cgylnvlsnn
      361 rwrerwcrvk dnklifhkdr tdlkthivsi plrgcevilg ldskhpltfr llrngqevav
      421 leasssedmg rwigillaet gsstdpgalh ydyidvemta sviqaakqtf cfmnrrvist
      481 npyrgsaang yacpsgmalh yddvpcings fkgkkppvtt ngitgkartl nsqpkkseav
      541 scvkrtasna eqykygknrv eadakrlqsk eeellkkkea lrnrlaqlrk erkdlraaie
      601 vnagrktqvi ledklkklee eckqkeaerv nleleltevk eslkkalagg itlglaiepk
      661 sgtsspqspi fkhrtlensp isscdtsdte csipvnsaaa lkrppssnns pcrghvlrka
      721 kewemkngt
//
LOCUS       XP_041314379             486 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal acetylcholine receptor subunit alpha-9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314379
VERSION     XP_041314379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458445.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="neuronal acetylcholine receptor subunit alpha-9"
                     /calculated_mol_wt=55544
     Region          13..481
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          33..239
                     /region_name="LGIC_ECD_nAChR_A9"
                     /note="extracellular domain of neuronal acetylcholine
                     receptor subunit alpha 9 (CHRNA9); cd19022"
                     /db_xref="CDD:349823"
     Site            order(68,70,76..77,84,106,108,117..118,120,122..123,127,
                     129..130,134..136,138,148,150,152,156,178,238)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:349823"
     Site            order(122,177..178,216..222,225..226)
                     /site_type="other"
                     /note="polypeptide binding site [polypeptide binding]"
                     /db_xref="CDD:349823"
     Region          157..171
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349823"
     CDS             1..486
                     /gene="CHRNA9"
                     /coded_by="XM_041458445.1:1..1461"
                     /db_xref="GeneID:121348661"
ORIGIN      
        1 mkmrslssfy vslwllfaav ilkavesakg kyahmlfnel fedysnalrp vedtdkvlnv
       61 tlqitlsqik dmdernqils aylwirqswy daylrwdkdk ydgldsirip snlvwrpdiv
      121 lynkadddfs epvntnvvlr ydgkitwdap aitksscvvd vsyfpfdsqq cnltfgswty
      181 ngnqvdlins ldsgdlsdfi edveweihgm pavknvityg ccsepypdvt ftlilkrkss
      241 fyifnlllpc ilisflaplg fylpadsgek vslgvtvlla ltvfqlmvae imppsenvpl
      301 igkyyiatmt mitastalti iimnlhhcgs eakpvpqwak vvildymski ffvydvgenc
      361 tspkrekeee crlegddgcq rrhkevrspl strnddcnlk eklngnwnks ygvngenvre
      421 tvnccscykm liknieyian cvrdhkanra kgiewkkvak vmdrffmwif fimvffmsvl
      481 iigkaa
//
LOCUS       XP_041314390             326 aa            linear   VRT 06-MAY-2021
DEFINITION  myb/SANT-like DNA-binding domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041314390
VERSION     XP_041314390.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458456.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="myb/SANT-like DNA-binding domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=37708
     Region          89..171
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..326
                     /gene="MSANTD1"
                     /coded_by="XM_041458456.1:1..981"
                     /db_xref="GeneID:121348667"
ORIGIN      
        1 mscltsvihk tgfqitnmsf tvlyfsyrwh nkdaklcsgs visceescgd fqahgrscap
       61 stagqsamaa aeipsyivss qtekhrrarn wtdaemrglm lvweeffdel kqtkrnakvy
      121 ekmanklfem tgeirhgeei kikitnmtfq yrklkcmtds etvapdwpyy ktidrilskv
      181 tdhsdvkmhe nqqpgpstsq teasqspsak stplylpynq ftyegreecf edehsessss
      241 llsyklraee rpvkkrkmqn csfqkkklkl meamleeqkk lsrameetcr evrrildqqn
      301 iiqvqslqlq ermmnllekm isksnv
//
LOCUS       XP_041314398             259 aa            linear   VRT 06-MAY-2021
DEFINITION  myb/SANT-like DNA-binding domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041314398
VERSION     XP_041314398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="myb/SANT-like DNA-binding domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=30442
     Region          22..104
                     /region_name="Myb_DNA-bind_4"
                     /note="Myb/SANT-like DNA-binding domain; pfam13837"
                     /db_xref="CDD:463994"
     CDS             1..259
                     /gene="MSANTD1"
                     /coded_by="XM_041458464.1:154..933"
                     /db_xref="GeneID:121348667"
ORIGIN      
        1 maaaeipsyi vssqtekhrr arnwtdaemr glmlvweeff delkqtkrna kvyekmankl
       61 femtgeirhg eeikikitnm tfqyrklkcm tdsetvapdw pyyktidril skvtdhsdvk
      121 mhenqqpgps tsqteasqsp sakstplylp ynqftyegre ecfedehses sssllsyklr
      181 aeerpvkkrk mqncsfqkkk lklmeamlee qkklsramee tcrevrrild qqniiqvqsl
      241 qlqermmnll ekmisksnv
//
LOCUS       XP_041314410             420 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional adapter 2-beta [Pyrgilauda ruficollis].
ACCESSION   XP_041314410
VERSION     XP_041314410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="transcriptional adapter 2-beta"
                     /calculated_mol_wt=48281
     Region          6..415
                     /region_name="COG5114"
                     /note="Histone acetyltransferase complex SAGA/ADA, subunit
                     ADA2 [Chromatin structure and dynamics]"
                     /db_xref="CDD:227445"
     CDS             1..420
                     /gene="TADA2B"
                     /coded_by="XM_041458476.1:31..1293"
                     /db_xref="GeneID:121348680"
ORIGIN      
        1 maelgkkycv yclaevsplr frctecadie lcpecfsaga eigphrrwhg yqlvdggrft
       61 lwgaeaeggw ssreeqllld aieqfgfgnw edmaahvgas rtpqevmehy vsmyihgnlg
      121 kacipdtipn rvtdhtcpsg gplspslttp lppldisvae qqqlgymplr ddyeieydqd
      181 aetlisglsv nyddddveie lkrahvdmyv rklkerqrrk niardynlvp aflgkdkkdk
      241 ekapkrkitk eekelrlklr plyqfmscke fedffenmhk erilrakire lqryrrngit
      301 kmeesaeyea arhkrekrke nkniasskrg keegkegefa aienlpgfel lsdrekvlcs
      361 slnlsparyv tvktiiikdh lqkrqgipsk srlpsyldkv lkkrilnflt esgwisrdas
//
LOCUS       XP_041314423             330 aa            linear   VRT 06-MAY-2021
DEFINITION  spondin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314423
VERSION     XP_041314423.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458489.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..330
                     /product="spondin-2"
                     /calculated_mol_wt=36492
     Region          42..236
                     /region_name="Spond_N"
                     /note="Spondin_N; pfam06468"
                     /db_xref="CDD:461924"
     Region          277..329
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     CDS             1..330
                     /gene="SPON2"
                     /coded_by="XM_041458489.1:149..1141"
                     /db_xref="GeneID:121348689"
ORIGIN      
        1 menlmfvyws ckviwtvlvt ilgyasslpv gedalctaee lakyriiftg kwsqtafpkq
       61 yplyrppaqw ssllgvthss dysmwkkney asngvrdfae kgeawalmke ieeagekiqs
      121 vhgifsapai ssgtgqtste levhprhplv sfvvrivpsp dwfvgidsln lcegdhwmde
      181 vsvdlfpyda gtdsgftfss pnfatipqdt vteitcssps hpansfyypk lkilppiaqv
      241 tmvklkksql glsapfinlp aksneiidtv setpldcevs qwsswglcrg vcretgtkir
      301 trfvllqpan ngmpcpnlde etacepencv
//
LOCUS       XP_041314439             799 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041314439
VERSION     XP_041314439.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458505.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..799
                     /product="anaphase-promoting complex subunit 4"
                     /calculated_mol_wt=90696
     Region          19..111
                     /region_name="ANAPC4_WD40"
                     /note="Anaphase-promoting complex subunit 4 WD40 domain;
                     pfam12894"
                     /db_xref="CDD:403945"
     Region          228..426
                     /region_name="ANAPC4"
                     /note="Anaphase-promoting complex, cyclosome, subunit 4;
                     pfam12896"
                     /db_xref="CDD:463744"
     CDS             1..799
                     /gene="ANAPC4"
                     /coded_by="XM_041458505.1:60..2459"
                     /db_xref="GeneID:121348691"
ORIGIN      
        1 mpafrqvgek qlpqevvfms wspkrdlial anragevllh rlanfqrvws lppnentgke
       61 vtalawrpdg kilafgladt kriilcdvek peslhsfsve lsitymhwme vteessvlts
      121 fynaedesnl llpklpalpk nysttakifs eeksdeimkl lgdvrlnalv lggssgfiei
      181 yaygmfkiat vngvagscrg lclssdlksl sviteiqtsp dseaeityfq ldtsllssyl
      241 pevtrmarkf thistllqyi klsltcmcea weeilmqmds rltkfvqekn tttsvqdefm
      301 qlllwgkasl elqallmnql tvkglkklgq siessyssiq klvishlqsg seallyhlse
      361 lkgmalwkqk yeslgldasg ideaitavgs filkanellq vidssmknfk affrwlyvam
      421 lrmsedhvlp elnkmtqkdi tfvadflteh fneapelynr kgkyfnverv gqylkdeddd
      481 lvsppniegn qwfnflkdst hlkespllfp yypekslhfv krqmegvidq clqkpadvig
      541 rsvhqavcms lykvsqseds tpqlfklpfl wndktsnlhy vlftmlensi skihilrrht
      601 dtsrsvsngi lavefgnfln nsinessdsr cyscldahfy ddetvtvvlk esvqqegker
      661 vlaqlplssv ytdedqdrkf iwdsmerlde rsgeiptrtv flesqwrvle nmkaqyvsvn
      721 girkvscvls snlrhirvfe mdveddgeve eeeeeettqi aagdpdepnq padgqdnvcd
      781 asaeelpeet eehetsldp
//
LOCUS       XP_041314450             482 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine synthase-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314450
VERSION     XP_041314450.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458516.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="threonine synthase-like 2"
                     /calculated_mol_wt=53491
     Region          3..456
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,414)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..482
                     /gene="THNSL2"
                     /coded_by="XM_041458516.1:422..1870"
                     /db_xref="GeneID:121348697"
ORIGIN      
        1 meyvstrggt ravdfegalf sgyapdgglf mpqhipslhr dtlqrwssls ypglvkelcs
       61 lfipaklvpr nalnelidra fsrfrhknvv hmsrlkdgln ilelwhgvty afkdlslsct
      121 gqflqyflek kqkhvnilvg tsgdtgssai esvrgqknvd ifvllpkgfc tqiqelqmtt
      181 viednvhvfa ahgnsdeide pikelfadvd fagkynlmsl nsvnwsrimv qiahyfyayf
      241 qctpsldttq lpmveivvpt ggggnitagc iaqkmglpir lvtvvnsndi ihrtvqhgdf
      301 slagsvkatl asamdiqepy nverilwlls gsdslliktl meqfniskrl klpedlhrkl
      361 setlgscsas dqdivgamrr cweenqyllc phsavaahyh ysqphsmprc clapasaakf
      421 qdallragla pqippeisal tametrstpl ergqdwtqvl wgrieavaqq weaqgrqpaq
      481 gn
//
LOCUS       XP_041314459             482 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine synthase-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314459
VERSION     XP_041314459.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458525.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="threonine synthase-like 2"
                     /calculated_mol_wt=53491
     Region          3..456
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,414)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..482
                     /gene="THNSL2"
                     /coded_by="XM_041458525.1:197..1645"
                     /db_xref="GeneID:121348697"
ORIGIN      
        1 meyvstrggt ravdfegalf sgyapdgglf mpqhipslhr dtlqrwssls ypglvkelcs
       61 lfipaklvpr nalnelidra fsrfrhknvv hmsrlkdgln ilelwhgvty afkdlslsct
      121 gqflqyflek kqkhvnilvg tsgdtgssai esvrgqknvd ifvllpkgfc tqiqelqmtt
      181 viednvhvfa ahgnsdeide pikelfadvd fagkynlmsl nsvnwsrimv qiahyfyayf
      241 qctpsldttq lpmveivvpt ggggnitagc iaqkmglpir lvtvvnsndi ihrtvqhgdf
      301 slagsvkatl asamdiqepy nverilwlls gsdslliktl meqfniskrl klpedlhrkl
      361 setlgscsas dqdivgamrr cweenqyllc phsavaahyh ysqphsmprc clapasaakf
      421 qdallragla pqippeisal tametrstpl ergqdwtqvl wgrieavaqq weaqgrqpaq
      481 gn
//
LOCUS       XP_041314468             482 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine synthase-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314468
VERSION     XP_041314468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458534.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="threonine synthase-like 2"
                     /calculated_mol_wt=53491
     Region          3..456
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,414)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..482
                     /gene="THNSL2"
                     /coded_by="XM_041458534.1:200..1648"
                     /db_xref="GeneID:121348697"
ORIGIN      
        1 meyvstrggt ravdfegalf sgyapdgglf mpqhipslhr dtlqrwssls ypglvkelcs
       61 lfipaklvpr nalnelidra fsrfrhknvv hmsrlkdgln ilelwhgvty afkdlslsct
      121 gqflqyflek kqkhvnilvg tsgdtgssai esvrgqknvd ifvllpkgfc tqiqelqmtt
      181 viednvhvfa ahgnsdeide pikelfadvd fagkynlmsl nsvnwsrimv qiahyfyayf
      241 qctpsldttq lpmveivvpt ggggnitagc iaqkmglpir lvtvvnsndi ihrtvqhgdf
      301 slagsvkatl asamdiqepy nverilwlls gsdslliktl meqfniskrl klpedlhrkl
      361 setlgscsas dqdivgamrr cweenqyllc phsavaahyh ysqphsmprc clapasaakf
      421 qdallragla pqippeisal tametrstpl ergqdwtqvl wgrieavaqq weaqgrqpaq
      481 gn
//
LOCUS       XP_041314478             482 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine synthase-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314478
VERSION     XP_041314478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="threonine synthase-like 2"
                     /calculated_mol_wt=53491
     Region          3..456
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,414)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..482
                     /gene="THNSL2"
                     /coded_by="XM_041458544.1:422..1870"
                     /db_xref="GeneID:121348697"
ORIGIN      
        1 meyvstrggt ravdfegalf sgyapdgglf mpqhipslhr dtlqrwssls ypglvkelcs
       61 lfipaklvpr nalnelidra fsrfrhknvv hmsrlkdgln ilelwhgvty afkdlslsct
      121 gqflqyflek kqkhvnilvg tsgdtgssai esvrgqknvd ifvllpkgfc tqiqelqmtt
      181 viednvhvfa ahgnsdeide pikelfadvd fagkynlmsl nsvnwsrimv qiahyfyayf
      241 qctpsldttq lpmveivvpt ggggnitagc iaqkmglpir lvtvvnsndi ihrtvqhgdf
      301 slagsvkatl asamdiqepy nverilwlls gsdslliktl meqfniskrl klpedlhrkl
      361 setlgscsas dqdivgamrr cweenqyllc phsavaahyh ysqphsmprc clapasaakf
      421 qdallragla pqippeisal tametrstpl ergqdwtqvl wgrieavaqq weaqgrqpaq
      481 gn
//
LOCUS       XP_041314483             482 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine synthase-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314483
VERSION     XP_041314483.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458549.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="threonine synthase-like 2"
                     /calculated_mol_wt=53491
     Region          3..456
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,414)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..482
                     /gene="THNSL2"
                     /coded_by="XM_041458549.1:422..1870"
                     /db_xref="GeneID:121348697"
ORIGIN      
        1 meyvstrggt ravdfegalf sgyapdgglf mpqhipslhr dtlqrwssls ypglvkelcs
       61 lfipaklvpr nalnelidra fsrfrhknvv hmsrlkdgln ilelwhgvty afkdlslsct
      121 gqflqyflek kqkhvnilvg tsgdtgssai esvrgqknvd ifvllpkgfc tqiqelqmtt
      181 viednvhvfa ahgnsdeide pikelfadvd fagkynlmsl nsvnwsrimv qiahyfyayf
      241 qctpsldttq lpmveivvpt ggggnitagc iaqkmglpir lvtvvnsndi ihrtvqhgdf
      301 slagsvkatl asamdiqepy nverilwlls gsdslliktl meqfniskrl klpedlhrkl
      361 setlgscsas dqdivgamrr cweenqyllc phsavaahyh ysqphsmprc clapasaakf
      421 qdallragla pqippeisal tametrstpl ergqdwtqvl wgrieavaqq weaqgrqpaq
      481 gn
//
LOCUS       XP_041314491             482 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine synthase-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314491
VERSION     XP_041314491.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458557.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="threonine synthase-like 2"
                     /calculated_mol_wt=53491
     Region          3..456
                     /region_name="Thr-synth_2"
                     /note="Threonine synthase catalyzes the final step of
                     threonine biosynthesis. The conversion of
                     O-phosphohomoserine into threonine and inorganic phosphate
                     is pyridoxal 5'-phosphate dependent. The Thr-synth_1 CD
                     includes members from higher plants, cyanobacteria;
                     cd01560"
                     /db_xref="CDD:107203"
     Site            order(113,261..262,414)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107203"
     Site            113
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107203"
     CDS             1..482
                     /gene="THNSL2"
                     /coded_by="XM_041458557.1:422..1870"
                     /db_xref="GeneID:121348697"
ORIGIN      
        1 meyvstrggt ravdfegalf sgyapdgglf mpqhipslhr dtlqrwssls ypglvkelcs
       61 lfipaklvpr nalnelidra fsrfrhknvv hmsrlkdgln ilelwhgvty afkdlslsct
      121 gqflqyflek kqkhvnilvg tsgdtgssai esvrgqknvd ifvllpkgfc tqiqelqmtt
      181 viednvhvfa ahgnsdeide pikelfadvd fagkynlmsl nsvnwsrimv qiahyfyayf
      241 qctpsldttq lpmveivvpt ggggnitagc iaqkmglpir lvtvvnsndi ihrtvqhgdf
      301 slagsvkatl asamdiqepy nverilwlls gsdslliktl meqfniskrl klpedlhrkl
      361 setlgscsas dqdivgamrr cweenqyllc phsavaahyh ysqphsmprc clapasaakf
      421 qdallragla pqippeisal tametrstpl ergqdwtqvl wgrieavaqq weaqgrqpaq
      481 gn
//
LOCUS       XP_041314501             184 aa            linear   VRT 06-MAY-2021
DEFINITION  neuromedin-U [Pyrgilauda ruficollis].
ACCESSION   XP_041314501
VERSION     XP_041314501.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458567.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="neuromedin-U"
                     /calculated_mol_wt=20302
     Region          152..176
                     /region_name="NMU"
                     /note="Neuromedin U; pfam02070"
                     /db_xref="CDD:460435"
     CDS             1..184
                     /gene="NMU"
                     /coded_by="XM_041458567.1:1..555"
                     /db_xref="GeneID:121348729"
ORIGIN      
        1 mgpvchqqpp aatpergprk ggdgaalpgs pllllfvlla ssisackgap mpsqelepde
       61 dlqllkeied acsaylstds qpqvsstlee lcflivgflq kpqgldekdn tkrflfhysk
      121 thdsgnsdim ssvlhpllql vphlnerrlk rykldeelqg pgviqsrgyf fyrprngrrs
      181 vgfr
//
LOCUS       XP_041314512            1275 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314512
VERSION     XP_041314512.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458578.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1275
                     /product="TBC1 domain family member 1 isoform X1"
                     /calculated_mol_wt=144485
     Region          19..150
                     /region_name="PTB"
                     /note="Phosphotyrosine-binding (PTB) PH-like fold;
                     cd00934"
                     /db_xref="CDD:269911"
     Site            order(24,112,133)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269911"
     Site            order(101..106,119,144,148)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269911"
     Region          165..394
                     /region_name="PTB_TBC1D1_like"
                     /note="TBC1 domain family member 1 and related proteins
                     Phosphotyrosine-binding (PTB) domain; cd01269"
                     /db_xref="CDD:269967"
     Site            order(177,353,376)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269967"
     Site            order(342..347,360,387,391)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269967"
     Region          799..854
                     /region_name="DUF3350"
                     /note="Domain of unknown function (DUF3350); pfam11830"
                     /db_xref="CDD:463365"
     Region          906..1123
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          1179..>1260
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..1275
                     /gene="TBC1D1"
                     /coded_by="XM_041458578.1:262..4089"
                     /db_xref="GeneID:121348740"
ORIGIN      
        1 mepitfkvkk cqtpsdfsas fslqlvgslp vhslttmsml pwivaeiqll sakspkeeps
       61 vsqirlcvsp aslrcepdtg etqqwdplic sslfeykpqq vhklihnshd psyfaclikd
      121 eaanqqsicy vfkaddqtkv peiissirqa gkiarqeefq nnlsdvedpf akkfevlfcg
      181 rvtvahknap palideciek fnrasctkns dfssssqqhe tannfggfsf ssklrsvfqp
      241 lvneeeekrp irksfsqpgl rsfafkkdfq egslrsnsfv rsfeedaisl nlksqlvygh
      301 svvqptdiae nrtmlftigq sevylispdt kkvaieksfk eisfcsqgir hvdhfgficr
      361 essenggfhf vcyvfqctde alvdeimmtl kqaftvaavq qtskaqpqlc egcpmqslhk
      421 lcekieglhp sktklelqkh lttlnneeqa svfeevqklr prneqkenel visllrnmye
      481 ekqkdhvhvg eakqasqppa enavnevsss asrfrldmlk nkakrsltes fesilsrgsk
      541 argpldrsgs vdldssmsst lsstskeppl cekekdrlpt lpaenavkts gslddlcsnt
      601 edfsleqsvt lpqqsfrrra ntlshlpses reslgpaets psvpqrklmr yhsvstetph
      661 krnssgqlar sptlarlnps asspnflkyl rhnssgetsg hfaqksisyr talrkklhss
      721 ssvpnflkfl apvdenntsd frsttsdyes khgqpaldad spvrtrrhsw rqqiflrvat
      781 pqkacdspsr yddycelgdl pprsplepvc edgpfgpvke erkrtphelr elwkkaiiqq
      841 illlrmeken qklqasennl qnrrlkldye eitpclkdvt liwekmlstp grskikfdve
      901 kihsavgqgv prhhrgeiwk flaeqyhlkh qfpskqqpkd tpykellkql tsqqhailid
      961 lgrtfpthpy fsaqlgagql slynilkays lldqevgycq glsfvagvll lhmseedafk
     1021 mlkflmfdmg lrkqyrpdmt ilqiqmyqls rllhdyhrdl ynhleaheig pslyaapwfl
     1081 tmfasqfplg fvsrvfdmlf lqgseaifkv alsllgshkp lilqhenlet ivdfikstlp
     1141 nlglvqmekt isqvfemdia kqlqayevey hvlqdelids slndnqrldk lekansslrk
     1201 qnfdlleelq vangkiqnle atvellltne gklkqsilal eqeraallka veemqkkmgd
     1261 tdgkplltrq eldad
//
LOCUS       XP_041314520            1275 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314520
VERSION     XP_041314520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1275
                     /product="TBC1 domain family member 1 isoform X1"
                     /calculated_mol_wt=144485
     Region          19..150
                     /region_name="PTB"
                     /note="Phosphotyrosine-binding (PTB) PH-like fold;
                     cd00934"
                     /db_xref="CDD:269911"
     Site            order(24,112,133)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269911"
     Site            order(101..106,119,144,148)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269911"
     Region          165..394
                     /region_name="PTB_TBC1D1_like"
                     /note="TBC1 domain family member 1 and related proteins
                     Phosphotyrosine-binding (PTB) domain; cd01269"
                     /db_xref="CDD:269967"
     Site            order(177,353,376)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269967"
     Site            order(342..347,360,387,391)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269967"
     Region          799..854
                     /region_name="DUF3350"
                     /note="Domain of unknown function (DUF3350); pfam11830"
                     /db_xref="CDD:463365"
     Region          906..1123
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          1179..>1260
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..1275
                     /gene="TBC1D1"
                     /coded_by="XM_041458586.1:222..4049"
                     /db_xref="GeneID:121348740"
ORIGIN      
        1 mepitfkvkk cqtpsdfsas fslqlvgslp vhslttmsml pwivaeiqll sakspkeeps
       61 vsqirlcvsp aslrcepdtg etqqwdplic sslfeykpqq vhklihnshd psyfaclikd
      121 eaanqqsicy vfkaddqtkv peiissirqa gkiarqeefq nnlsdvedpf akkfevlfcg
      181 rvtvahknap palideciek fnrasctkns dfssssqqhe tannfggfsf ssklrsvfqp
      241 lvneeeekrp irksfsqpgl rsfafkkdfq egslrsnsfv rsfeedaisl nlksqlvygh
      301 svvqptdiae nrtmlftigq sevylispdt kkvaieksfk eisfcsqgir hvdhfgficr
      361 essenggfhf vcyvfqctde alvdeimmtl kqaftvaavq qtskaqpqlc egcpmqslhk
      421 lcekieglhp sktklelqkh lttlnneeqa svfeevqklr prneqkenel visllrnmye
      481 ekqkdhvhvg eakqasqppa enavnevsss asrfrldmlk nkakrsltes fesilsrgsk
      541 argpldrsgs vdldssmsst lsstskeppl cekekdrlpt lpaenavkts gslddlcsnt
      601 edfsleqsvt lpqqsfrrra ntlshlpses reslgpaets psvpqrklmr yhsvstetph
      661 krnssgqlar sptlarlnps asspnflkyl rhnssgetsg hfaqksisyr talrkklhss
      721 ssvpnflkfl apvdenntsd frsttsdyes khgqpaldad spvrtrrhsw rqqiflrvat
      781 pqkacdspsr yddycelgdl pprsplepvc edgpfgpvke erkrtphelr elwkkaiiqq
      841 illlrmeken qklqasennl qnrrlkldye eitpclkdvt liwekmlstp grskikfdve
      901 kihsavgqgv prhhrgeiwk flaeqyhlkh qfpskqqpkd tpykellkql tsqqhailid
      961 lgrtfpthpy fsaqlgagql slynilkays lldqevgycq glsfvagvll lhmseedafk
     1021 mlkflmfdmg lrkqyrpdmt ilqiqmyqls rllhdyhrdl ynhleaheig pslyaapwfl
     1081 tmfasqfplg fvsrvfdmlf lqgseaifkv alsllgshkp lilqhenlet ivdfikstlp
     1141 nlglvqmekt isqvfemdia kqlqayevey hvlqdelids slndnqrldk lekansslrk
     1201 qnfdlleelq vangkiqnle atvellltne gklkqsilal eqeraallka veemqkkmgd
     1261 tdgkplltrq eldad
//
LOCUS       XP_041314529            1275 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314529
VERSION     XP_041314529.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458595.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1275
                     /product="TBC1 domain family member 1 isoform X1"
                     /calculated_mol_wt=144485
     Region          19..150
                     /region_name="PTB"
                     /note="Phosphotyrosine-binding (PTB) PH-like fold;
                     cd00934"
                     /db_xref="CDD:269911"
     Site            order(24,112,133)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269911"
     Site            order(101..106,119,144,148)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269911"
     Region          165..394
                     /region_name="PTB_TBC1D1_like"
                     /note="TBC1 domain family member 1 and related proteins
                     Phosphotyrosine-binding (PTB) domain; cd01269"
                     /db_xref="CDD:269967"
     Site            order(177,353,376)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269967"
     Site            order(342..347,360,387,391)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269967"
     Region          799..854
                     /region_name="DUF3350"
                     /note="Domain of unknown function (DUF3350); pfam11830"
                     /db_xref="CDD:463365"
     Region          906..1123
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          1179..>1260
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..1275
                     /gene="TBC1D1"
                     /coded_by="XM_041458595.1:1089..4916"
                     /db_xref="GeneID:121348740"
ORIGIN      
        1 mepitfkvkk cqtpsdfsas fslqlvgslp vhslttmsml pwivaeiqll sakspkeeps
       61 vsqirlcvsp aslrcepdtg etqqwdplic sslfeykpqq vhklihnshd psyfaclikd
      121 eaanqqsicy vfkaddqtkv peiissirqa gkiarqeefq nnlsdvedpf akkfevlfcg
      181 rvtvahknap palideciek fnrasctkns dfssssqqhe tannfggfsf ssklrsvfqp
      241 lvneeeekrp irksfsqpgl rsfafkkdfq egslrsnsfv rsfeedaisl nlksqlvygh
      301 svvqptdiae nrtmlftigq sevylispdt kkvaieksfk eisfcsqgir hvdhfgficr
      361 essenggfhf vcyvfqctde alvdeimmtl kqaftvaavq qtskaqpqlc egcpmqslhk
      421 lcekieglhp sktklelqkh lttlnneeqa svfeevqklr prneqkenel visllrnmye
      481 ekqkdhvhvg eakqasqppa enavnevsss asrfrldmlk nkakrsltes fesilsrgsk
      541 argpldrsgs vdldssmsst lsstskeppl cekekdrlpt lpaenavkts gslddlcsnt
      601 edfsleqsvt lpqqsfrrra ntlshlpses reslgpaets psvpqrklmr yhsvstetph
      661 krnssgqlar sptlarlnps asspnflkyl rhnssgetsg hfaqksisyr talrkklhss
      721 ssvpnflkfl apvdenntsd frsttsdyes khgqpaldad spvrtrrhsw rqqiflrvat
      781 pqkacdspsr yddycelgdl pprsplepvc edgpfgpvke erkrtphelr elwkkaiiqq
      841 illlrmeken qklqasennl qnrrlkldye eitpclkdvt liwekmlstp grskikfdve
      901 kihsavgqgv prhhrgeiwk flaeqyhlkh qfpskqqpkd tpykellkql tsqqhailid
      961 lgrtfpthpy fsaqlgagql slynilkays lldqevgycq glsfvagvll lhmseedafk
     1021 mlkflmfdmg lrkqyrpdmt ilqiqmyqls rllhdyhrdl ynhleaheig pslyaapwfl
     1081 tmfasqfplg fvsrvfdmlf lqgseaifkv alsllgshkp lilqhenlet ivdfikstlp
     1141 nlglvqmekt isqvfemdia kqlqayevey hvlqdelids slndnqrldk lekansslrk
     1201 qnfdlleelq vangkiqnle atvellltne gklkqsilal eqeraallka veemqkkmgd
     1261 tdgkplltrq eldad
//
LOCUS       XP_041314538            1275 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314538
VERSION     XP_041314538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458604.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1275
                     /product="TBC1 domain family member 1 isoform X1"
                     /calculated_mol_wt=144485
     Region          19..150
                     /region_name="PTB"
                     /note="Phosphotyrosine-binding (PTB) PH-like fold;
                     cd00934"
                     /db_xref="CDD:269911"
     Site            order(24,112,133)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269911"
     Site            order(101..106,119,144,148)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269911"
     Region          165..394
                     /region_name="PTB_TBC1D1_like"
                     /note="TBC1 domain family member 1 and related proteins
                     Phosphotyrosine-binding (PTB) domain; cd01269"
                     /db_xref="CDD:269967"
     Site            order(177,353,376)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269967"
     Site            order(342..347,360,387,391)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269967"
     Region          799..854
                     /region_name="DUF3350"
                     /note="Domain of unknown function (DUF3350); pfam11830"
                     /db_xref="CDD:463365"
     Region          906..1123
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          1179..>1260
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..1275
                     /gene="TBC1D1"
                     /coded_by="XM_041458604.1:243..4070"
                     /db_xref="GeneID:121348740"
ORIGIN      
        1 mepitfkvkk cqtpsdfsas fslqlvgslp vhslttmsml pwivaeiqll sakspkeeps
       61 vsqirlcvsp aslrcepdtg etqqwdplic sslfeykpqq vhklihnshd psyfaclikd
      121 eaanqqsicy vfkaddqtkv peiissirqa gkiarqeefq nnlsdvedpf akkfevlfcg
      181 rvtvahknap palideciek fnrasctkns dfssssqqhe tannfggfsf ssklrsvfqp
      241 lvneeeekrp irksfsqpgl rsfafkkdfq egslrsnsfv rsfeedaisl nlksqlvygh
      301 svvqptdiae nrtmlftigq sevylispdt kkvaieksfk eisfcsqgir hvdhfgficr
      361 essenggfhf vcyvfqctde alvdeimmtl kqaftvaavq qtskaqpqlc egcpmqslhk
      421 lcekieglhp sktklelqkh lttlnneeqa svfeevqklr prneqkenel visllrnmye
      481 ekqkdhvhvg eakqasqppa enavnevsss asrfrldmlk nkakrsltes fesilsrgsk
      541 argpldrsgs vdldssmsst lsstskeppl cekekdrlpt lpaenavkts gslddlcsnt
      601 edfsleqsvt lpqqsfrrra ntlshlpses reslgpaets psvpqrklmr yhsvstetph
      661 krnssgqlar sptlarlnps asspnflkyl rhnssgetsg hfaqksisyr talrkklhss
      721 ssvpnflkfl apvdenntsd frsttsdyes khgqpaldad spvrtrrhsw rqqiflrvat
      781 pqkacdspsr yddycelgdl pprsplepvc edgpfgpvke erkrtphelr elwkkaiiqq
      841 illlrmeken qklqasennl qnrrlkldye eitpclkdvt liwekmlstp grskikfdve
      901 kihsavgqgv prhhrgeiwk flaeqyhlkh qfpskqqpkd tpykellkql tsqqhailid
      961 lgrtfpthpy fsaqlgagql slynilkays lldqevgycq glsfvagvll lhmseedafk
     1021 mlkflmfdmg lrkqyrpdmt ilqiqmyqls rllhdyhrdl ynhleaheig pslyaapwfl
     1081 tmfasqfplg fvsrvfdmlf lqgseaifkv alsllgshkp lilqhenlet ivdfikstlp
     1141 nlglvqmekt isqvfemdia kqlqayevey hvlqdelids slndnqrldk lekansslrk
     1201 qnfdlleelq vangkiqnle atvellltne gklkqsilal eqeraallka veemqkkmgd
     1261 tdgkplltrq eldad
//
LOCUS       XP_041314548            1262 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314548
VERSION     XP_041314548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1262
                     /product="TBC1 domain family member 1 isoform X2"
                     /calculated_mol_wt=142878
     Region          19..150
                     /region_name="PTB"
                     /note="Phosphotyrosine-binding (PTB) PH-like fold;
                     cd00934"
                     /db_xref="CDD:269911"
     Site            order(24,112,133)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269911"
     Site            order(101..106,119,144,148)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269911"
     Region          165..394
                     /region_name="PTB_TBC1D1_like"
                     /note="TBC1 domain family member 1 and related proteins
                     Phosphotyrosine-binding (PTB) domain; cd01269"
                     /db_xref="CDD:269967"
     Site            order(177,353,376)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269967"
     Site            order(342..347,360,387,391)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269967"
     Region          786..841
                     /region_name="DUF3350"
                     /note="Domain of unknown function (DUF3350); pfam11830"
                     /db_xref="CDD:463365"
     Region          893..1110
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          1166..>1247
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..1262
                     /gene="TBC1D1"
                     /coded_by="XM_041458614.1:262..4050"
                     /db_xref="GeneID:121348740"
ORIGIN      
        1 mepitfkvkk cqtpsdfsas fslqlvgslp vhslttmsml pwivaeiqll sakspkeeps
       61 vsqirlcvsp aslrcepdtg etqqwdplic sslfeykpqq vhklihnshd psyfaclikd
      121 eaanqqsicy vfkaddqtkv peiissirqa gkiarqeefq nnlsdvedpf akkfevlfcg
      181 rvtvahknap palideciek fnrasctkns dfssssqqhe tannfggfsf ssklrsvfqp
      241 lvneeeekrp irksfsqpgl rsfafkkdfq egslrsnsfv rsfeedaisl nlksqlvygh
      301 svvqptdiae nrtmlftigq sevylispdt kkvaieksfk eisfcsqgir hvdhfgficr
      361 essenggfhf vcyvfqctde alvdeimmtl kqaftvaavq qtskaqpqlc egcpmqslhk
      421 lcekieglhp sktklelqkh lttlnneeqa svfeevqklr prneqkenel visllrnmye
      481 ekqkdhvhvg eakqasqppa enavnevsss asrfrldmlk nkakrsltes fesilsrgsk
      541 argpldrsgs vdldssmsst lsstskeppl cekekdrlpt lpaenavkts gslddlcsnt
      601 edfsleqsvt lpqqsfrrra ntlshlpses reslgpaets psvpqrklms ssgqlarspt
      661 larlnpsass pnflkylrhn ssgetsghfa qksisyrtal rkklhssssv pnflkflapv
      721 denntsdfrs ttsdyeskhg qpaldadspv rtrrhswrqq iflrvatpqk acdspsrydd
      781 ycelgdlppr splepvcedg pfgpvkeerk rtphelrelw kkaiiqqill lrmekenqkl
      841 qasennlqnr rlkldyeeit pclkdvtliw ekmlstpgrs kikfdvekih savgqgvprh
      901 hrgeiwkfla eqyhlkhqfp skqqpkdtpy kellkqltsq qhailidlgr tfpthpyfsa
      961 qlgagqlsly nilkayslld qevgycqgls fvagvlllhm seedafkmlk flmfdmglrk
     1021 qyrpdmtilq iqmyqlsrll hdyhrdlynh leaheigpsl yaapwfltmf asqfplgfvs
     1081 rvfdmlflqg seaifkvals llgshkplil qhenletivd fikstlpnlg lvqmektisq
     1141 vfemdiakql qayeveyhvl qdelidssln dnqrldklek ansslrkqnf dlleelqvan
     1201 gkiqnleatv ellltnegkl kqsilaleqe raallkavee mqkkmgdtdg kplltrqeld
     1261 ad
//
LOCUS       XP_041314557            1192 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314557
VERSION     XP_041314557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1192
                     /product="TBC1 domain family member 1 isoform X3"
                     /calculated_mol_wt=135417
     Region          19..150
                     /region_name="PTB"
                     /note="Phosphotyrosine-binding (PTB) PH-like fold;
                     cd00934"
                     /db_xref="CDD:269911"
     Site            order(24,112,133)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269911"
     Site            order(101..106,119,144,148)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269911"
     Region          165..394
                     /region_name="PTB_TBC1D1_like"
                     /note="TBC1 domain family member 1 and related proteins
                     Phosphotyrosine-binding (PTB) domain; cd01269"
                     /db_xref="CDD:269967"
     Site            order(177,353,376)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269967"
     Site            order(342..347,360,387,391)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269967"
     Region          716..771
                     /region_name="DUF3350"
                     /note="Domain of unknown function (DUF3350); pfam11830"
                     /db_xref="CDD:463365"
     Region          823..1040
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          1096..>1177
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..1192
                     /gene="TBC1D1"
                     /coded_by="XM_041458623.1:264..3842"
                     /db_xref="GeneID:121348740"
ORIGIN      
        1 mepitfkvkk cqtpsdfsas fslqlvgslp vhslttmsml pwivaeiqll sakspkeeps
       61 vsqirlcvsp aslrcepdtg etqqwdplic sslfeykpqq vhklihnshd psyfaclikd
      121 eaanqqsicy vfkaddqtkv peiissirqa gkiarqeefq nnlsdvedpf akkfevlfcg
      181 rvtvahknap palideciek fnrasctkns dfssssqqhe tannfggfsf ssklrsvfqp
      241 lvneeeekrp irksfsqpgl rsfafkkdfq egslrsnsfv rsfeedaisl nlksqlvygh
      301 svvqptdiae nrtmlftigq sevylispdt kkvaieksfk eisfcsqgir hvdhfgficr
      361 essenggfhf vcyvfqctde alvdeimmtl kqaftvaavq qtskaqpqlc egcpmqslhk
      421 lcekieglhp sktklelqkh lttlnneeqa svfeevqklr prneqkenel visllrnmye
      481 ekqkdhvhvg eakqasqppa enavnevsss asrfrldmlk nkakrsltes fesilsrgsk
      541 argpldrsgs vdldssmsst lsstskeppl cekekdrlpt lpaenavkts gslddlcsnt
      601 edfsleqsvt lpqqsfrrra ntlshlpses reslgpaets psvpqrklmr yhsvstetph
      661 krndyeskhg qpaldadspv rtrrhswrqq iflrvatpqk acdspsrydd ycelgdlppr
      721 splepvcedg pfgpvkeerk rtphelrelw kkaiiqqill lrmekenqkl qasennlqnr
      781 rlkldyeeit pclkdvtliw ekmlstpgrs kikfdvekih savgqgvprh hrgeiwkfla
      841 eqyhlkhqfp skqqpkdtpy kellkqltsq qhailidlgr tfpthpyfsa qlgagqlsly
      901 nilkayslld qevgycqgls fvagvlllhm seedafkmlk flmfdmglrk qyrpdmtilq
      961 iqmyqlsrll hdyhrdlynh leaheigpsl yaapwfltmf asqfplgfvs rvfdmlflqg
     1021 seaifkvals llgshkplil qhenletivd fikstlpnlg lvqmektisq vfemdiakql
     1081 qayeveyhvl qdelidssln dnqrldklek ansslrkqnf dlleelqvan gkiqnleatv
     1141 ellltnegkl kqsilaleqe raallkavee mqkkmgdtdg kplltrqeld ad
//
LOCUS       XP_041314565            1146 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041314565
VERSION     XP_041314565.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458631.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1146
                     /product="TBC1 domain family member 1 isoform X4"
                     /calculated_mol_wt=130060
     Region          36..265
                     /region_name="PTB_TBC1D1_like"
                     /note="TBC1 domain family member 1 and related proteins
                     Phosphotyrosine-binding (PTB) domain; cd01269"
                     /db_xref="CDD:269967"
     Site            order(48,224,247)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269967"
     Site            order(213..218,231,258,262)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269967"
     Region          670..725
                     /region_name="DUF3350"
                     /note="Domain of unknown function (DUF3350); pfam11830"
                     /db_xref="CDD:463365"
     Region          777..994
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     Region          1050..>1131
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..1146
                     /gene="TBC1D1"
                     /coded_by="XM_041458631.1:127..3567"
                     /db_xref="GeneID:121348740"
ORIGIN      
        1 msplfswvak vpeiissirq agkiarqeef qnnlsdvedp fakkfevlfc grvtvahkna
       61 ppalidecie kfnrasctkn sdfssssqqh etannfggfs fssklrsvfq plvneeeekr
      121 pirksfsqpg lrsfafkkdf qegslrsnsf vrsfeedais lnlksqlvyg hsvvqptdia
      181 enrtmlftig qsevylispd tkkvaieksf keisfcsqgi rhvdhfgfic ressenggfh
      241 fvcyvfqctd ealvdeimmt lkqaftvaav qqtskaqpql cegcpmqslh klcekieglh
      301 psktklelqk hlttlnneeq asvfeevqkl rprneqkene lvisllrnmy eekqkdhvhv
      361 geakqasqpp aenavnevss sasrfrldml knkakrslte sfesilsrgs kargpldrsg
      421 svdldssmss tlsstskepp lcekekdrlp tlpaenavkt sgslddlcsn tedfsleqsv
      481 tlpqqsfrrr antlshlpse sreslgpaet spsvpqrklm ryhsvstetp hkrnssgqla
      541 rsptlarlnp sasspnflky lrhnssgets ghfaqksisy rtalrkklhs sssvpnflkf
      601 lapvdennts dfrsttsdye skhgqpalda dspvrtrrhs wrqqiflrva tpqkacdsps
      661 ryddycelgd lpprsplepv cedgpfgpvk eerkrtphel relwkkaiiq qilllrmeke
      721 nqklqasenn lqnrrlkldy eeitpclkdv tliwekmlst pgrskikfdv ekihsavgqg
      781 vprhhrgeiw kflaeqyhlk hqfpskqqpk dtpykellkq ltsqqhaili dlgrtfpthp
      841 yfsaqlgagq lslynilkay slldqevgyc qglsfvagvl llhmseedaf kmlkflmfdm
      901 glrkqyrpdm tilqiqmyql srllhdyhrd lynhleahei gpslyaapwf ltmfasqfpl
      961 gfvsrvfdml flqgseaifk valsllgshk plilqhenle tivdfikstl pnlglvqmek
     1021 tisqvfemdi akqlqayeve yhvlqdelid sslndnqrld klekansslr kqnfdlleel
     1081 qvangkiqnl eatvellltn egklkqsila leqeraallk aveemqkkmg dtdgkplltr
     1141 qeldad
//
LOCUS       XP_041314578             609 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphoglucomutase-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314578
VERSION     XP_041314578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458644.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="phosphoglucomutase-2"
                     /calculated_mol_wt=67948
     Region          9..609
                     /region_name="PTZ00150"
                     /note="phosphoglucomutase-2-like protein; Provisional"
                     /db_xref="CDD:240294"
     CDS             1..609
                     /gene="PGM2"
                     /coded_by="XM_041458644.1:33..1862"
                     /db_xref="GeneID:121348769"
ORIGIN      
        1 maargsaadg alrraaeqwl lwdknpktya ivkqllaegn aeelqkyfgs rmefgtaglr
       61 aamgagishm ndltiiqttq gfcryleknf sdlkkrgvvi gfdarahlss ggsskrfarl
      121 aantfisqgv pvylfsdiip tpfvpytvth lklcagimvt ashnpkqdng ykvywengaq
      181 iisphdkgis qaieenqepw pqawddklid sspllhdpya mvnkeyfkdi qkqcfyrnin
      241 ketnlkfvht svhgvghkfv qlafkafdls ppfavpeqkd pdpdfptvky pnpeegkgvl
      301 tlsfalaekd gariilandp dadrlavaek qesgewkvfs gnelgallgw wiftcwknns
      361 rdtraikdvy mlsstvsski lraialkegf hfeetltgfk wmgnrakqlm dqgkavlfaf
      421 eeaigymccp avldkdgvsa avitaemasf latrnlslsq qlkavydeyg fhitkasyfi
      481 chdpkviqql fdnlrnfdgk ntypkscgrf kvsgirdltt gydssqpdqk ailptskssq
      541 mitftfangg vatmrtsgte pkikyyselc appgnsdveq lkkeldelvn alekhffqpe
      601 knklqrkte
//
LOCUS       XP_041314592            1087 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 2-alpha kinase 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041314592
VERSION     XP_041314592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1087
                     /product="eukaryotic translation initiation factor 2-alpha
                     kinase 3"
                     /calculated_mol_wt=121339
     Region          89..404
                     /region_name="Luminal_EIF2AK3"
                     /note="The Luminal domain, a dimerization domain, of the
                     Serine/Threonine protein kinase, eukaryotic translation
                     Initiation Factor 2-Alpha Kinase 3; cd09768"
                     /db_xref="CDD:188874"
     Site            order(169..173,178,180..183,185..187,199,201..203,
                     223..224,232,234,249,251..253)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:188874"
     Region          570..1053
                     /region_name="STKc_EIF2AK3_PERK"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     eukaryotic translation Initiation Factor 2-Alpha Kinase 3
                     or PKR-like Endoplasmic Reticulum Kinase; cd14048"
                     /db_xref="CDD:270950"
     Site            order(570..571,574..575,620..621,624..625,627..628,
                     636..644,646,658,906,909..911)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270950"
     Site            order(582..583,588,590,603,605,693..696,740,920..921,923,
                     934,966..968,999,1001..1008)
                     /site_type="active"
                     /db_xref="CDD:270950"
     Site            order(582..583,588,590,603,605,635,693..696,740,916,918,
                     920..921,923,934)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270950"
     Region          <863..936
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(933..942,944..968)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270950"
     Site            order(966..968,999,1001..1008)
                     /site_type="other"
                     /note="eIF2alpha (substrate) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270950"
     CDS             1..1087
                     /gene="EIF2AK3"
                     /coded_by="XM_041458658.1:135..3398"
                     /db_xref="GeneID:121348773"
ORIGIN      
        1 mrgprgrsal aafallvllg vaaggpeppp sdaaaveaaf glgaaaapaa lpagsadvtv
       61 eddeggvapa gpgepdaegs geartgsrsl viistldgri aaldpensgr kqwdldvgsg
      121 slvssslskp evfgnkmiip sldgglfqwd rdresmeavp ftveslless ykfgedvvlv
      181 ggkslttygl ssysgkvkyi csavgcrrwd deeseqeetl llhrtqktvr avgprsgnek
      241 wnfsvghfel ryvpdietra gyiesnfkst mnkeetkiis dvdeqeammk dtvikvsvad
      301 wkvmafnrrg ghleweyqfc tpiasawllk dgkvipislf ddtsyttnne vledeedlve
      361 aargatessv ylgmfrgqly lqssvrifek fptnpkales rndnaiiplp kikwkpliqs
      421 psrtpvlvgs defdkclsnd kysheeysng alsvlqypyd ngyylpyykr ernkrsnqit
      481 vrffddtnyk nirkkdpvll lhwwkeivgt ilfcivattf ivrklfhphp ysrlrkeset
      541 qcqtdckyep tcgdikdnsw sdaknsgyvs ryltdfepiq clgrggfgvv fearnkvddc
      601 nyaikrirlp nrelarekvm revkalakle hpgivryfna wleapperwq ekmdeqwlkd
      661 estdwplssp spmdvpsfki ttepfstkeh ievtaasser vrsvgipcgq sdssgsqfsp
      721 lefsdtdnrd lqhsedplln lqdsvltgcd vedstinsne lghsleicss avpvvhlkeg
      781 tsssivfeds gcgnassked kvdvshnesp sedkgkttke sdnkksasgs plsvspprpt
      841 slsldlsknt aekvkptspk vylyiqmqlc rkenlkdwms rrctieerer teclqiflqi
      901 aeavdflhsk glmhrdlkps nifftmddiv kvgdfglvta mdqdeeeesv ltpmpayarh
      961 tgqvgtklym speqicgnty shkvdifslg lilfellypf stqmervktl sdvrnlkfpp
     1021 lftqkyaqey tmvkdmlsps pterpeaaai ienpvfedle lppkpvlrqr srtmslsgnk
     1081 hsrqpsk
//
LOCUS       XP_041314605             316 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314605
VERSION     XP_041314605.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458671.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase
                     2"
                     /calculated_mol_wt=35193
     Region          32..275
                     /region_name="Rib_hydrolase"
                     /note="ADP-ribosyl cyclase, also known as cyclic
                     ADP-ribose hydrolase or CD38; cd04759"
                     /db_xref="CDD:212498"
     Site            order(103..105,108,124..125,134,167,200,205)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:212498"
     CDS             1..316
                     /gene="BST1"
                     /coded_by="XM_041458671.1:163..1113"
                     /db_xref="GeneID:121348778"
ORIGIN      
        1 mmmslffpll fvsvlcmnsf sgvqgrkwkg egttqnlesi vigrcydyvr ivnpavgekn
       61 csqiweafkn afinkdpcsi lpkdyelfin ltfhtippnk slfwennqll vnsfadrgrr
      121 ymsvgdtlfg fvgdflnwcg qadspdldye scptmtecen navdsfwrma sityarhssg
      181 viqvllngsa eggaypqpgf fadyeipnfq kdkisqvviw vvddiggpdr dscgtnsvkt
      241 letrlktlgf dvtctdnyks vmfllcldnp ddskcalass apaaqrgpis sdrggswnkl
      301 mfvsfagflf rfalvy
//
LOCUS       XP_041314624             486 aa            linear   VRT 06-MAY-2021
DEFINITION  O-phosphoseryl-tRNA(Sec) selenium transferase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314624
VERSION     XP_041314624.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458690.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="O-phosphoseryl-tRNA(Sec) selenium transferase"
                     /calculated_mol_wt=53269
     Region          12..458
                     /region_name="selenium_SpcS"
                     /note="O-phosphoseryl-tRNA(Sec) selenium transferase;
                     TIGR03531"
                     /db_xref="CDD:211833"
     Site            284
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99734"
     CDS             1..486
                     /gene="SEPSECS"
                     /coded_by="XM_041458690.1:85..1545"
                     /db_xref="GeneID:121348786"
ORIGIN      
        1 mnaenqgcse rlvtaayvrq gaqgrrahel rlralleqgk cpedgwdest ielflhelai
       61 mdsnnflgnc gvgeregrva sglvarrhyr lihgigrsgd isavqpkaag ssllnkltns
      121 vvldviklag vrtvtncfvv pmatgmsltl cfltlrhkrp kakyiiwpri dqkscfksmi
      181 tagfepvvie nvlegdelrt dleaveakik algaenilcv hsttscfapr vpdrleelav
      241 icanydiphi vnnaygvqss kcmhliqqga rvgridafvq sldknfmvpv ggaiiagfne
      301 sfiqeiskmy pgrasaspsl dvlitllslg asgykkllke rkemfsylss elkkladnhn
      361 erlldtphnp islamslktl detndaavtq lgsmlftrqv sgarvvpcgs vqtvnnytfk
      421 gfmshandyp caylnaasai gikkqdvdvf lkrldkclkt frkeakqeks inevsdanaa
      481 teqled
//
LOCUS       XP_041314637             648 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-gated cation channel alpha-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314637
VERSION     XP_041314637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="cGMP-gated cation channel alpha-1"
                     /calculated_mol_wt=75089
     Region          120..362
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          434..550
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(500..501,516..518)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(538..540,544..546)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          550..619
                     /region_name="CLZ"
                     /note="C-terminal leucine zipper domain of cyclic
                     nucleotide-gated channels; pfam16526"
                     /db_xref="CDD:465160"
     CDS             1..648
                     /gene="CNGA1"
                     /coded_by="XM_041458703.1:1..1947"
                     /db_xref="GeneID:121348797"
ORIGIN      
        1 mkvgviethh shtvvptvvv hdtskdlglm hegenryarq qylpgvfacy ninnnsnkde
       61 eekkrkkekk skpekkkdge tkknkekkek nknkdklkkk enteekkkdi ftidpagniy
      121 ynwlfcitmp vmynwtmiia racfdelqhd ylvawfiidy vsdaiyvadm fvrtrtgyle
      181 qgllvkeehk lrekykksfq fkldflsiip tdllyfklgl nypelrinrl lrvarmfeff
      241 qrtetrtnyp nifrisnlvm yiviiihwna cvyysiskai gfgadtwvyp ntsdpefarl
      301 trkyvyslyw stltlttige tpppvrdsey ffvvvdflvg vlifativgn vgsmisnmna
      361 araefqarid aikqymhfrn vskdmekrvi kwfdylwtnk kavderevlk ylpdklraei
      421 ainvhletlk kvrifadcea gllvelvlkl qpqvyspgdy icrkgdigre myiikegkla
      481 vvaddgitqf vvlsdgsyfg eisilnikgs kagnrrtani ksigysdlfc lskddlmeal
      541 teypdakaml eekgkqilmk dglldieian lgsdpkdlee kvaymeramd rlqtkfarll
      601 aeyegaqqkm kkrltqieki lkpiieeefa dleeadpstd kpglskae
//
LOCUS       XP_041314651             312 aa            linear   VRT 06-MAY-2021
DEFINITION  polyprenol reductase [Pyrgilauda ruficollis].
ACCESSION   XP_041314651
VERSION     XP_041314651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458717.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="polyprenol reductase"
                     /calculated_mol_wt=35238
     Region          67..312
                     /region_name="ICMT"
                     /note="Isoprenylcysteine carboxyl methyltransferase (ICMT)
                     family; cl21511"
                     /db_xref="CDD:473892"
     CDS             1..312
                     /gene="SRD5A3"
                     /coded_by="XM_041458717.1:30..968"
                     /db_xref="GeneID:121348803"
ORIGIN      
        1 mlavlaaawa llaaaflaal lllrrapapr pggpglvisg lfqdlirygk tkrgcgqlpg
       61 wlrllqvpkr wfthfyvvsv lwngfllicl fraeflgesf pswiqdmhha lgtnsqskdm
      121 dsehfsallv llllwlhscr rlaeclwtsv fssgvihivq ycfglgyyia vgstvlcqvp
      181 tnvrngkkps vqicwyhiig vmmyiwaslh qhrclailan lrksrsgkvv slshsvpfgd
      241 wfesvscphy faelliyvsm aitlgmhnvt wwcvvmyvlf nqalaavlch efyqknfssy
      301 pkhrkafipl vf
//
LOCUS       XP_041314662             391 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-B3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314662
VERSION     XP_041314662.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458728.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="homeobox protein Hox-B3"
                     /calculated_mol_wt=40648
     Region          152..208
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          329..389
                     /region_name="DUF4074"
                     /note="Domain of unknown function (DUF4074); pfam13293"
                     /db_xref="CDD:463833"
     CDS             1..391
                     /gene="HOXB3"
                     /coded_by="XM_041458728.1:484..1659"
                     /db_xref="GeneID:121348810"
ORIGIN      
        1 mqktsyydss tlfggysygs aaaangfgye gaqppfqass hmendfqrss cslqshgknk
       61 elngscmrpg eppaspnaan adgsngqagg gknnpgkgnv gagasiskqi fpwmkesrqn
      121 skqkngspga etcgggggsg geksppgssa skrartayts aqlvelekef hfnkylcrpr
      181 rvemanllnl serqikiwfq nrrmkykkdq kskgmggsss ggpspagspp qpmqasagfl
      241 nalhpmsgay eapsppsfsk phqnayavaa pgyqaplkgc psqqkyagaa aaaeyephvl
      301 qangvaygta gmqgspayvg gnfvdslpas gpalyglnhl phhqtagmdy ggvppgqphg
      361 pceshaayte lsshhatsqg riqeapklth l
//
LOCUS       XP_041314671             391 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-B3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314671
VERSION     XP_041314671.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458737.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="homeobox protein Hox-B3"
                     /calculated_mol_wt=40648
     Region          152..208
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          329..389
                     /region_name="DUF4074"
                     /note="Domain of unknown function (DUF4074); pfam13293"
                     /db_xref="CDD:463833"
     CDS             1..391
                     /gene="HOXB3"
                     /coded_by="XM_041458737.1:613..1788"
                     /db_xref="GeneID:121348810"
ORIGIN      
        1 mqktsyydss tlfggysygs aaaangfgye gaqppfqass hmendfqrss cslqshgknk
       61 elngscmrpg eppaspnaan adgsngqagg gknnpgkgnv gagasiskqi fpwmkesrqn
      121 skqkngspga etcgggggsg geksppgssa skrartayts aqlvelekef hfnkylcrpr
      181 rvemanllnl serqikiwfq nrrmkykkdq kskgmggsss ggpspagspp qpmqasagfl
      241 nalhpmsgay eapsppsfsk phqnayavaa pgyqaplkgc psqqkyagaa aaaeyephvl
      301 qangvaygta gmqgspayvg gnfvdslpas gpalyglnhl phhqtagmdy ggvppgqphg
      361 pceshaayte lsshhatsqg riqeapklth l
//
LOCUS       XP_041314682             391 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-B3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314682
VERSION     XP_041314682.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458748.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="homeobox protein Hox-B3"
                     /calculated_mol_wt=40648
     Region          152..208
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          329..389
                     /region_name="DUF4074"
                     /note="Domain of unknown function (DUF4074); pfam13293"
                     /db_xref="CDD:463833"
     CDS             1..391
                     /gene="HOXB3"
                     /coded_by="XM_041458748.1:617..1792"
                     /db_xref="GeneID:121348810"
ORIGIN      
        1 mqktsyydss tlfggysygs aaaangfgye gaqppfqass hmendfqrss cslqshgknk
       61 elngscmrpg eppaspnaan adgsngqagg gknnpgkgnv gagasiskqi fpwmkesrqn
      121 skqkngspga etcgggggsg geksppgssa skrartayts aqlvelekef hfnkylcrpr
      181 rvemanllnl serqikiwfq nrrmkykkdq kskgmggsss ggpspagspp qpmqasagfl
      241 nalhpmsgay eapsppsfsk phqnayavaa pgyqaplkgc psqqkyagaa aaaeyephvl
      301 qangvaygta gmqgspayvg gnfvdslpas gpalyglnhl phhqtagmdy ggvppgqphg
      361 pceshaayte lsshhatsqg riqeapklth l
//
LOCUS       XP_041314690             391 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-B3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314690
VERSION     XP_041314690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458756.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="homeobox protein Hox-B3"
                     /calculated_mol_wt=40648
     Region          152..208
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          329..389
                     /region_name="DUF4074"
                     /note="Domain of unknown function (DUF4074); pfam13293"
                     /db_xref="CDD:463833"
     CDS             1..391
                     /gene="HOXB3"
                     /coded_by="XM_041458756.1:629..1804"
                     /db_xref="GeneID:121348810"
ORIGIN      
        1 mqktsyydss tlfggysygs aaaangfgye gaqppfqass hmendfqrss cslqshgknk
       61 elngscmrpg eppaspnaan adgsngqagg gknnpgkgnv gagasiskqi fpwmkesrqn
      121 skqkngspga etcgggggsg geksppgssa skrartayts aqlvelekef hfnkylcrpr
      181 rvemanllnl serqikiwfq nrrmkykkdq kskgmggsss ggpspagspp qpmqasagfl
      241 nalhpmsgay eapsppsfsk phqnayavaa pgyqaplkgc psqqkyagaa aaaeyephvl
      301 qangvaygta gmqgspayvg gnfvdslpas gpalyglnhl phhqtagmdy ggvppgqphg
      361 pceshaayte lsshhatsqg riqeapklth l
//
LOCUS       XP_041314698             391 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-B3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314698
VERSION     XP_041314698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="homeobox protein Hox-B3"
                     /calculated_mol_wt=40648
     Region          152..208
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          329..389
                     /region_name="DUF4074"
                     /note="Domain of unknown function (DUF4074); pfam13293"
                     /db_xref="CDD:463833"
     CDS             1..391
                     /gene="HOXB3"
                     /coded_by="XM_041458764.1:535..1710"
                     /db_xref="GeneID:121348810"
ORIGIN      
        1 mqktsyydss tlfggysygs aaaangfgye gaqppfqass hmendfqrss cslqshgknk
       61 elngscmrpg eppaspnaan adgsngqagg gknnpgkgnv gagasiskqi fpwmkesrqn
      121 skqkngspga etcgggggsg geksppgssa skrartayts aqlvelekef hfnkylcrpr
      181 rvemanllnl serqikiwfq nrrmkykkdq kskgmggsss ggpspagspp qpmqasagfl
      241 nalhpmsgay eapsppsfsk phqnayavaa pgyqaplkgc psqqkyagaa aaaeyephvl
      301 qangvaygta gmqgspayvg gnfvdslpas gpalyglnhl phhqtagmdy ggvppgqphg
      361 pceshaayte lsshhatsqg riqeapklth l
//
LOCUS       XP_041314713             351 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-2-macroglobulin receptor-associated protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314713
VERSION     XP_041314713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458779.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="alpha-2-macroglobulin receptor-associated
                     protein"
                     /calculated_mol_wt=40833
     Region          20..123
                     /region_name="Alpha-2-MRAP_N"
                     /note="Alpha-2-macroglobulin RAP, N-terminal domain;
                     pfam06400"
                     /db_xref="CDD:461898"
     Region          139..351
                     /region_name="Alpha-2-MRAP_C"
                     /note="Alpha-2-macroglobulin RAP, C-terminal domain;
                     pfam06401"
                     /db_xref="CDD:461899"
     CDS             1..351
                     /gene="LRPAP1"
                     /coded_by="XM_041458779.1:44..1099"
                     /db_xref="GeneID:121348832"
ORIGIN      
        1 maamrvlpal aaalllaaag qaskysrean eglaaadgkr reagefrvvr lnqiwekaqr
       61 lhlsavklae lhsdlkiqek delswkklka egldedgeke aklrrnlnvi mtkygmngkk
      121 dsqlvdtnyi kdgtesdtld dprleklwsk aktsgkfsde eldklwrefk hhkekireyn
      181 illetvsrte dmhknvinps eenlvkeeil hnkhrelkek lrsinqgfer lrkvshqgyd
      241 ttsefeeprv idlwdmaksa nftekelesf reelkhfeak iekhhhyqkq leishqklkh
      301 vegtgdkdhl nrnkekyaml qektkelgyk vkkhlqdlss risqglqhne l
//
LOCUS       XP_041314733             965 aa            linear   VRT 06-MAY-2021
DEFINITION  mast/stem cell growth factor receptor Kit isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314733
VERSION     XP_041314733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..965
                     /product="mast/stem cell growth factor receptor Kit
                     isoform X1"
                     /calculated_mol_wt=107435
     Region          32..99
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          48..52
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          82..87
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          112..191
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          203..289
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          232..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          284..287
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          295..395
                     /region_name="IgI_4_SCFR"
                     /note="Fourth immunoglobulin (Ig)-like domain of stem cell
                     factor receptor (SCFR); member of the I-set of IgSF
                     domains; cd05860"
                     /db_xref="CDD:409446"
     Region          295..301
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409446"
     Region          305..310
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409446"
     Region          313..323
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409446"
     Region          327..334
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409446"
     Region          336..339
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409446"
     Region          342..347
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409446"
     Region          356..365
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409446"
     Site            order(364..367,370)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409446"
     Region          372..380
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409446"
     Region          383..394
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409446"
     Region          537..911
                     /region_name="PTKc_Kit"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Kit; cd05104"
                     /db_xref="CDD:270682"
     Site            order(579..585,587,605,607,655,657,661,775,779..780,782,
                     793,811..815,824,859)
                     /site_type="active"
                     /db_xref="CDD:270682"
     Site            order(579..580,582..585,587,605,607,655,657,661,779..780,
                     782,793)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270682"
     Site            order(775,779,811..815,824,859)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270682"
     Site            792..817
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270682"
     CDS             1..965
                     /gene="KIT"
                     /coded_by="XM_041458799.1:60..2957"
                     /db_xref="GeneID:121348846"
ORIGIN      
        1 megailarel ahtvllllsl fpaggalshv rvvnkgeelr lpcneegpvt wnfqnsdpsa
       61 karssnekew ytknatvrdi grytcrskgs ivssyyvfvk dpnvlflvds liygkedsdi
      121 llvcpltdpn vtnftlkrcd gkrlpknmtf ipnpqkgivi knvqrsfkgc yqclakhngv
      181 qkisekifln vrpvhktlpv itlsksyell kegedfevtc iitdvdssvq sswishksgt
      241 virksrnlgd ygyerkltln irsvgvndsg eftcqaensf gktnatvtlk alakgfvrlf
      301 atmnttidin agqngnltve yeaypkpkee vwmymnetlq nssdhdvkfk tvgnnsytse
      361 lhltrlkgte ggiytffvsn sdasssvtfn vyvktkpeii tldilsngvl qcvaagfpap
      421 tiywyfcpgt eqrcfdsptl spmdvkigyt nssvpsferv lvestinasm frstgtvcce
      481 assngdrssa ffnfaikeqi rthtlftpll tafgvaaglm ciivmilvyi ylqkpkyevq
      541 wkvveeingn nyvyidptql pydhkwefpr nrlsfgktlg agafgkvvea tayglfksda
      601 amtvavkmlk tsahlterea lmselkvlsy lgnhinivnl lgactiggpt lviteyccyg
      661 dllnflrrkr dsficpkhee hadaavyenl lhqsepaadv aneymdmkpg vsyavppkad
      721 kkrpvksgsy tdqdvtlsmp eddelaldve dllsfsyqva kgmsflaskn cihrdlaarn
      781 illthgritk icdfglardi rndsnyvvkg narlpvkwma pesifncvyt fesdvwsygi
      841 llwelfslgs spypgipvds kfykmikegy rmfspecapp emydimkscw dadplqrptf
      901 kqivqmieqq lsdnaprvya nfstppssqg napdhsvrin svgssasstq pllvfgkang
      961 dmflg
//
LOCUS       XP_041314742             958 aa            linear   VRT 06-MAY-2021
DEFINITION  mast/stem cell growth factor receptor Kit isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314742
VERSION     XP_041314742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..958
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..958
                     /product="mast/stem cell growth factor receptor Kit
                     isoform X2"
                     /calculated_mol_wt=106796
     Region          32..99
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          48..52
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          82..87
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          112..191
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          203..289
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          232..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          284..287
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          295..395
                     /region_name="IgI_4_SCFR"
                     /note="Fourth immunoglobulin (Ig)-like domain of stem cell
                     factor receptor (SCFR); member of the I-set of IgSF
                     domains; cd05860"
                     /db_xref="CDD:409446"
     Region          295..301
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409446"
     Region          305..310
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409446"
     Region          313..323
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409446"
     Region          327..334
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409446"
     Region          336..339
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409446"
     Region          342..347
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409446"
     Region          356..365
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409446"
     Site            order(364..367,370)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409446"
     Region          372..380
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409446"
     Region          383..394
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409446"
     Region          537..911
                     /region_name="PTKc_Kit"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Kit; cd05104"
                     /db_xref="CDD:270682"
     Site            order(579..585,587,605,607,655,657,661,775,779..780,782,
                     793,811..815,824,859)
                     /site_type="active"
                     /db_xref="CDD:270682"
     Site            order(579..580,582..585,587,605,607,655,657,661,779..780,
                     782,793)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270682"
     Site            order(775,779,811..815,824,859)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270682"
     Site            792..817
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270682"
     CDS             1..958
                     /gene="KIT"
                     /coded_by="XM_041458808.1:60..2936"
                     /db_xref="GeneID:121348846"
ORIGIN      
        1 megailarel ahtvllllsl fpaggalshv rvvnkgeelr lpcneegpvt wnfqnsdpsa
       61 karssnekew ytknatvrdi grytcrskgs ivssyyvfvk dpnvlflvds liygkedsdi
      121 llvcpltdpn vtnftlkrcd gkrlpknmtf ipnpqkgivi knvqrsfkgc yqclakhngv
      181 qkisekifln vrpvhktlpv itlsksyell kegedfevtc iitdvdssvq sswishksgt
      241 virksrnlgd ygyerkltln irsvgvndsg eftcqaensf gktnatvtlk alakgfvrlf
      301 atmnttidin agqngnltve yeaypkpkee vwmymnetlq nssdhdvkfk tvgnnsytse
      361 lhltrlkgte ggiytffvsn sdasssvtfn vyvktkpeii tldilsngvl qcvaagfpap
      421 tiywyfcpgt eqrcfdsptl spmdvkigyt nssvpsferv lvestinasm frstgtvcce
      481 assngdrssa ffnfaikeqi rthtlftpll tafgvaaglm ciivmilvyi ylqkpkyevq
      541 wkvveeingn nyvyidptql pydhkwefpr nrlsfgktlg agafgkvvea tayglfksda
      601 amtvavkmlk tsahlterea lmselkvlsy lgnhinivnl lgactiggpt lviteyccyg
      661 dllnflrrkr dsficpkhee hadaavyenl lhqsepaadv aneymdmkpg vsyavppkad
      721 kkrpvksgsy tdqdvtlsmp eddelaldve dllsfsyqva kgmsflaskn cihrdlaarn
      781 illthgritk icdfglardi rndsnyvvkg narlpvkwma pesifncvyt fesdvwsygi
      841 llwelfslgs spypgipvds kfykmikegy rmfspecapp emydimkscw dadplqrptf
      901 kqivqmieqq lsdnaprvya nfstppssqg napdhsvrin svgssasstq pllvrkdv
//
LOCUS       XP_041314753             571 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 149 [Pyrgilauda ruficollis].
ACCESSION   XP_041314753
VERSION     XP_041314753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..571
                     /product="coiled-coil domain-containing protein 149"
                     /calculated_mol_wt=64301
     Region          21..333
                     /region_name="CC149"
                     /note="Coiled-coil domain-containing protein 149-A;
                     pfam09789"
                     /db_xref="CDD:462902"
     CDS             1..571
                     /gene="CCDC149"
                     /coded_by="XM_041458819.1:47..1762"
                     /db_xref="GeneID:121348858"
ORIGIN      
        1 msshrsesdw qgllseylvc krkleskkea llilskeldt cqqerdqykl manqlrerhq
       61 slkkkyreli dgdpslppek rkqanlaqll seaqdrnkhl geeigelqqr lgevqgdnkl
      121 lrmtiakqrl gddevgarhf aaheredlvq qlekareqie tlrydlqaal delqdvkeer
      181 svyqdksdrl nqelnhvlgg henriidida lcmenrylqe rlkqlqeevn llkssitkyk
      241 nalerrknsk thsrssssal tgvlsakqvq ellsedhgcs lpatpqsisd lkslatalle
      301 tiheknmviq hqrqtnkilg nrvaelekkl rtleiaglws lpggkdtitf sdpalpviqr
      361 srspllafad kpqraevqae qkgerdetya vaseslapeg tnlnnriqnk hfypslpqlp
      421 seeedinklg sqiikltvte legkrggapv geqnvgvdae lndsseaefp lsspdpsdpt
      481 dpsneneqtg etealkdndk tlerdyeipn eredqnsstm dvvhtenagr hgglsvktad
      541 tntsfeelse senkkpsdaa enreyldnsl a
//
LOCUS       XP_041314766             576 aa            linear   VRT 06-MAY-2021
DEFINITION  proton channel OTOP1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314766
VERSION     XP_041314766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..576
                     /product="proton channel OTOP1"
                     /calculated_mol_wt=64705
     Region          <4..75
                     /region_name="DUF2919"
                     /note="Protein of unknown function (DUF2919); pfam11143"
                     /db_xref="CDD:431678"
     Region          94..562
                     /region_name="Otopetrin"
                     /note="pfam03189"
                     /db_xref="CDD:460840"
     CDS             1..576
                     /gene="OTOP1"
                     /coded_by="XM_041458832.1:1..1731"
                     /db_xref="GeneID:121348863"
ORIGIN      
        1 meqaagcpav ggsypqknae ilssqyginl flagllltfa wavhavgisk shllsylitl
       61 mliqllwmlw ylcrsctqrr lirdkdthag arwlkcgitl favitlilds fkigyyidfs
      121 nclsptegif pvthavhtil qvyflwchak dviqsfktle rfgvihsvft nlllwtngvl
      181 teskhqlneh kerlitlgfg nitivlddha pqcncttttl csifsqgiyy lypfnieyhi
      241 lastmlyvlw knigrkvehh qqnktpfkfh gitvgmifgl ivltstiavv vvyliqiggs
      301 kikselaltm fylhaifvla lmctagvval liyrledrsl dnsknparkl daellvgtaa
      361 gswllswgsi laiicaqghp kytwynlpys ilviiekyiq nlfiiesihr eqekvnddik
      421 tlrivtisrg stlsltplyk eiyngraard sgdipclfkg sicarengga gvageetsqd
      481 nslvmhsasd fsfysrnsvt nnkrrilkni aaflflcnls lwippafgcr peydngleei
      541 vfgfepwiiv vnlampfsif yrmhsaaslf evnckt
//
LOCUS       XP_041314778             767 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-adducin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314778
VERSION     XP_041314778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458844.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..767
                     /product="alpha-adducin isoform X1"
                     /calculated_mol_wt=84441
     Region          145..391
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(151,155,163,188,190..191,241,243..244,249..251,259,
                     261..262,273,301,312,319,323,330,348)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(168,185..186,211..213,239,241,302)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(239,241,302)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          <591..>736
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     CDS             1..767
                     /gene="ADD1"
                     /coded_by="XM_041458844.1:162..2465"
                     /db_xref="GeneID:121348873"
ORIGIN      
        1 mngdsgvgvv tspppttaph keryfdrvde nnpeylrern mapdlrqdfn mmeqkkrvsm
       61 ilqspafcee lesmiqeqfk kgknptglla lqqiadfmtt hvpnvypaap qggmaalnms
      121 lgmvtpvndl rgsdsiayek gekllrckla afyrladlfg wsqliynhit arvnseqehf
      181 livpfgllys evtasslvki niqgdvvdrg stnlgvnqag ftlhsaiyaa rpdvkcivhi
      241 htpagaavsa mkcgllpisp ealslgevay hdyhgilvdd eekvviqknl gpkskvlilr
      301 nhglvsvget veeafyyihn lvlaceiqvr tlasaggpdn lvlldpgkyk aksrspespa
      361 gegtvshpkw qigeqefeal mrmldnlgyr tgypyrcpal rekskkysdv eipasvtgys
      421 ftsdgesgis splrhsfqkq qrektrwlns grgddaseeg qngsspkskt kvwtnithdh
      481 vkpllqslss gvcvpscitn clwtkedghr tatsavpnlf vplntnpkev qemrnkireq
      541 nlqdiktagp qsqvlsgvvv drslvqgelv taskaiieke yqpkvivstt gpnpfnkltd
      601 releeyrkev erkqkgpeep sedgrpqkek sppepssart ppstpikiee earqeqtyrd
      661 dsdaatfkqt lpdltpdeps ealgfpplgk eegrcdhdvp ksqteppave nkepqsqpte
      721 epatptaeeg taadagsdes pgkspskkkk kfrtpsflkk skkksds
//
LOCUS       XP_041314787             767 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-adducin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314787
VERSION     XP_041314787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..767
                     /product="alpha-adducin isoform X1"
                     /calculated_mol_wt=84441
     Region          145..391
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(151,155,163,188,190..191,241,243..244,249..251,259,
                     261..262,273,301,312,319,323,330,348)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(168,185..186,211..213,239,241,302)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(239,241,302)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          <591..>736
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     CDS             1..767
                     /gene="ADD1"
                     /coded_by="XM_041458853.1:153..2456"
                     /db_xref="GeneID:121348873"
ORIGIN      
        1 mngdsgvgvv tspppttaph keryfdrvde nnpeylrern mapdlrqdfn mmeqkkrvsm
       61 ilqspafcee lesmiqeqfk kgknptglla lqqiadfmtt hvpnvypaap qggmaalnms
      121 lgmvtpvndl rgsdsiayek gekllrckla afyrladlfg wsqliynhit arvnseqehf
      181 livpfgllys evtasslvki niqgdvvdrg stnlgvnqag ftlhsaiyaa rpdvkcivhi
      241 htpagaavsa mkcgllpisp ealslgevay hdyhgilvdd eekvviqknl gpkskvlilr
      301 nhglvsvget veeafyyihn lvlaceiqvr tlasaggpdn lvlldpgkyk aksrspespa
      361 gegtvshpkw qigeqefeal mrmldnlgyr tgypyrcpal rekskkysdv eipasvtgys
      421 ftsdgesgis splrhsfqkq qrektrwlns grgddaseeg qngsspkskt kvwtnithdh
      481 vkpllqslss gvcvpscitn clwtkedghr tatsavpnlf vplntnpkev qemrnkireq
      541 nlqdiktagp qsqvlsgvvv drslvqgelv taskaiieke yqpkvivstt gpnpfnkltd
      601 releeyrkev erkqkgpeep sedgrpqkek sppepssart ppstpikiee earqeqtyrd
      661 dsdaatfkqt lpdltpdeps ealgfpplgk eegrcdhdvp ksqteppave nkepqsqpte
      721 epatptaeeg taadagsdes pgkspskkkk kfrtpsflkk skkksds
//
LOCUS       XP_041314796             736 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-adducin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314796
VERSION     XP_041314796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..736
                     /product="alpha-adducin isoform X2"
                     /calculated_mol_wt=81094
     Region          145..391
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(151,155,163,188,190..191,241,243..244,249..251,259,
                     261..262,273,301,312,319,323,330,348)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(168,185..186,211..213,239,241,302)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(239,241,302)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          <560..>705
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     CDS             1..736
                     /gene="ADD1"
                     /coded_by="XM_041458862.1:161..2371"
                     /db_xref="GeneID:121348873"
ORIGIN      
        1 mngdsgvgvv tspppttaph keryfdrvde nnpeylrern mapdlrqdfn mmeqkkrvsm
       61 ilqspafcee lesmiqeqfk kgknptglla lqqiadfmtt hvpnvypaap qggmaalnms
      121 lgmvtpvndl rgsdsiayek gekllrckla afyrladlfg wsqliynhit arvnseqehf
      181 livpfgllys evtasslvki niqgdvvdrg stnlgvnqag ftlhsaiyaa rpdvkcivhi
      241 htpagaavsa mkcgllpisp ealslgevay hdyhgilvdd eekvviqknl gpkskvlilr
      301 nhglvsvget veeafyyihn lvlaceiqvr tlasaggpdn lvlldpgkyk aksrspespa
      361 gegtvshpkw qigeqefeal mrmldnlgyr tgypyrcpal rekskkysdv eipasvtgys
      421 ftsdgesgis splrhsfqkq qrektrwlns grgddaseeg qngsspkskt kwtkedghrt
      481 atsavpnlfv plntnpkevq emrnkireqn lqdiktagpq sqvlsgvvvd rslvqgelvt
      541 askaiiekey qpkvivsttg pnpfnkltdr eleeyrkeve rkqkgpeeps edgrpqkeks
      601 ppepssartp pstpikieee arqeqtyrdd sdaatfkqtl pdltpdepse algfpplgke
      661 egrcdhdvpk sqteppaven kepqsqptee patptaeegt aadagsdesp gkspskkkkk
      721 frtpsflkks kkksds
//
LOCUS       XP_041314803             661 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-adducin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314803
VERSION     XP_041314803.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458869.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..661
                     /product="alpha-adducin isoform X3"
                     /calculated_mol_wt=72938
     Region          145..391
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(151,155,163,188,190..191,241,243..244,249..251,259,
                     261..262,273,301,312,319,323,330,348)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(168,185..186,211..213,239,241,302)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(239,241,302)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          <596..647
                     /region_name="CFAP77"
                     /note="Cilia- and flagella-associated protein 77;
                     pfam14825"
                     /db_xref="CDD:464337"
     CDS             1..661
                     /gene="ADD1"
                     /coded_by="XM_041458869.1:163..2148"
                     /db_xref="GeneID:121348873"
ORIGIN      
        1 mngdsgvgvv tspppttaph keryfdrvde nnpeylrern mapdlrqdfn mmeqkkrvsm
       61 ilqspafcee lesmiqeqfk kgknptglla lqqiadfmtt hvpnvypaap qggmaalnms
      121 lgmvtpvndl rgsdsiayek gekllrckla afyrladlfg wsqliynhit arvnseqehf
      181 livpfgllys evtasslvki niqgdvvdrg stnlgvnqag ftlhsaiyaa rpdvkcivhi
      241 htpagaavsa mkcgllpisp ealslgevay hdyhgilvdd eekvviqknl gpkskvlilr
      301 nhglvsvget veeafyyihn lvlaceiqvr tlasaggpdn lvlldpgkyk aksrspespa
      361 gegtvshpkw qigeqefeal mrmldnlgyr tgypyrcpal rekskkysdv eipasvtgys
      421 ftsdgesgis splrhsfqkq qrektrwlns grgddaseeg qngsspkskt kvwtnithdh
      481 vkpllqslss gvcvpscitn clwtkedghr tatsavpnlf vplntnpkev qemrnkireq
      541 nlqdiktagp qsqvlsgvvv drslvqgelv taskaiieke yqpkvivstt gpnpfnkltd
      601 releeyrkev erkqkgpeep sedgrpqkek sppepssart ppstpikiee gdgyakeyll
      661 p
//
LOCUS       XP_041314812             630 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-adducin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041314812
VERSION     XP_041314812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..630
                     /product="alpha-adducin isoform X4"
                     /calculated_mol_wt=69590
     Region          145..391
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(151,155,163,188,190..191,241,243..244,249..251,259,
                     261..262,273,301,312,319,323,330,348)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(168,185..186,211..213,239,241,302)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(239,241,302)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          <565..616
                     /region_name="CFAP77"
                     /note="Cilia- and flagella-associated protein 77;
                     pfam14825"
                     /db_xref="CDD:464337"
     CDS             1..630
                     /gene="ADD1"
                     /coded_by="XM_041458878.1:162..2054"
                     /db_xref="GeneID:121348873"
ORIGIN      
        1 mngdsgvgvv tspppttaph keryfdrvde nnpeylrern mapdlrqdfn mmeqkkrvsm
       61 ilqspafcee lesmiqeqfk kgknptglla lqqiadfmtt hvpnvypaap qggmaalnms
      121 lgmvtpvndl rgsdsiayek gekllrckla afyrladlfg wsqliynhit arvnseqehf
      181 livpfgllys evtasslvki niqgdvvdrg stnlgvnqag ftlhsaiyaa rpdvkcivhi
      241 htpagaavsa mkcgllpisp ealslgevay hdyhgilvdd eekvviqknl gpkskvlilr
      301 nhglvsvget veeafyyihn lvlaceiqvr tlasaggpdn lvlldpgkyk aksrspespa
      361 gegtvshpkw qigeqefeal mrmldnlgyr tgypyrcpal rekskkysdv eipasvtgys
      421 ftsdgesgis splrhsfqkq qrektrwlns grgddaseeg qngsspkskt kwtkedghrt
      481 atsavpnlfv plntnpkevq emrnkireqn lqdiktagpq sqvlsgvvvd rslvqgelvt
      541 askaiiekey qpkvivsttg pnpfnkltdr eleeyrkeve rkqkgpeeps edgrpqkeks
      601 ppepssartp pstpikieeg dgyakeyllp
//
LOCUS       XP_041314820             630 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-adducin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041314820
VERSION     XP_041314820.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458886.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..630
                     /product="alpha-adducin isoform X5"
                     /calculated_mol_wt=69590
     Region          145..391
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(151,155,163,188,190..191,241,243..244,249..251,259,
                     261..262,273,301,312,319,323,330,348)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(168,185..186,211..213,239,241,302)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(239,241,302)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     Region          <565..616
                     /region_name="CFAP77"
                     /note="Cilia- and flagella-associated protein 77;
                     pfam14825"
                     /db_xref="CDD:464337"
     CDS             1..630
                     /gene="ADD1"
                     /coded_by="XM_041458886.1:162..2054"
                     /db_xref="GeneID:121348873"
ORIGIN      
        1 mngdsgvgvv tspppttaph keryfdrvde nnpeylrern mapdlrqdfn mmeqkkrvsm
       61 ilqspafcee lesmiqeqfk kgknptglla lqqiadfmtt hvpnvypaap qggmaalnms
      121 lgmvtpvndl rgsdsiayek gekllrckla afyrladlfg wsqliynhit arvnseqehf
      181 livpfgllys evtasslvki niqgdvvdrg stnlgvnqag ftlhsaiyaa rpdvkcivhi
      241 htpagaavsa mkcgllpisp ealslgevay hdyhgilvdd eekvviqknl gpkskvlilr
      301 nhglvsvget veeafyyihn lvlaceiqvr tlasaggpdn lvlldpgkyk aksrspespa
      361 gegtvshpkw qigeqefeal mrmldnlgyr tgypyrcpal rekskkysdv eipasvtgys
      421 ftsdgesgis splrhsfqkq qrektrwlns grgddaseeg qngsspkskt kwtkedghrt
      481 atsavpnlfv plntnpkevq emrnkireqn lqdiktagpq sqvlsgvvvd rslvqgelvt
      541 askaiiekey qpkvivsttg pnpfnkltdr eleeyrkeve rkqkgpeeps edgrpqkeks
      601 ppepssartp pstpikieeg dgyakeyllp
//
LOCUS       XP_041314829             923 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-adducin isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041314829
VERSION     XP_041314829.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458895.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..923
                     /product="alpha-adducin isoform X6"
                     /calculated_mol_wt=101422
     Region          145..391
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(151,155,163,188,190..191,241,243..244,249..251,259,
                     261..262,273,301,312,319,323,330,348)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(168,185..186,211..213,239,241,302)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(239,241,302)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     CDS             1..923
                     /gene="ADD1"
                     /coded_by="XM_041458895.1:166..2937"
                     /db_xref="GeneID:121348873"
ORIGIN      
        1 mngdsgvgvv tspppttaph keryfdrvde nnpeylrern mapdlrqdfn mmeqkkrvsm
       61 ilqspafcee lesmiqeqfk kgknptglla lqqiadfmtt hvpnvypaap qggmaalnms
      121 lgmvtpvndl rgsdsiayek gekllrckla afyrladlfg wsqliynhit arvnseqehf
      181 livpfgllys evtasslvki niqgdvvdrg stnlgvnqag ftlhsaiyaa rpdvkcivhi
      241 htpagaavsa mkcgllpisp ealslgevay hdyhgilvdd eekvviqknl gpkskvlilr
      301 nhglvsvget veeafyyihn lvlaceiqvr tlasaggpdn lvlldpgkyk aksrspespa
      361 gegtvshpkw qigeqefeal mrmldnlgyr tgypyrcpal rekskkysdv eipasvtgys
      421 ftsdgesgis splrhsfqkq qrektrwlns grgddaseeg qngsspkskt kvwtnithdh
      481 vkpllqslss gvcvpscitn clwtkedghr tatsavpnlf vplntnpkev qemrnkireq
      541 nlqdiktagp qsqvlsgvvv drslvqdapl sdctesiegl dlteqafspa kslsvrkgel
      601 vtaskaiiek eyqpkvivst tgpnpfnklt dreleeyrke verkqkgped kvskygetvl
      661 lrqtpageqs avlrnqtise qntsdkksld lkgrsntfqg adtktlqdrd vsslpksldn
      721 vqfaaawvpc qtmqqsiphl ngeepdgqks shkefhtavi kalrsdpdll aeasepsedg
      781 rpqkeksppe pssartppst pikieeearq eqtyrddsda atfkqtlpdl tpdepsealg
      841 fpplgkeegr cdhdvpksqt eppavenkep qsqpteepat ptaeegtaad agsdespgks
      901 pskkkkkfrt psflkkskkk sds
//
LOCUS       XP_041314844             480 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 10 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314844
VERSION     XP_041314844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458910.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..480
                     /product="major facilitator superfamily domain-containing
                     protein 10 isoform X1"
                     /calculated_mol_wt=52091
     Region          38..475
                     /region_name="MFS_MFSD10"
                     /note="Major facilitator superfamily domain-containing
                     protein 10; cd17389"
                     /db_xref="CDD:340947"
     Site            order(48..49,52..53,56,117,167..168,170..172,175,194,
                     197..198,201,301,304..305,308..310,313,341,345,394..395,
                     399,403,426,429..430,433..434,437)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340947"
     CDS             1..480
                     /gene="MFSD10"
                     /coded_by="XM_041458910.1:40..1482"
                     /db_xref="GeneID:121348904"
ORIGIN      
        1 mcsfiiwkqs sgnmalqerg tssspsndkq eqnynrviti vflalfidll gfalilplfp
       61 sildyysqte dgfylslqrg vdwfavmagi pperkynsvl fggligsifs llqffssplt
      121 gavsdhwgrr pvilvtvmgl iasyslwaas rtfgvfllsr iiggiskgnv slstaiiadl
      181 hsakarskgm amigvafslg ftlgpmmgay ltmqtekgev fylrsalsal vfsvadfifi
      241 flllpetlpk ekrvpsvasg fqaavdllsp lalfqfsavt rgkespseqn lqnlkilgla
      301 yflylflfsg leytlsflth qrfhfssmqq gkmfffigit maviqggyar rikpgneira
      361 vkraimllip aflligwaan vtmlsaglll ysfaaaivip clsavvsgyv shsactgtag
      421 qkgrvmgilr slgalaralg pilaaavywl agaevcftic gafflvplal lrsikqtkee
//
LOCUS       XP_041314852             473 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 10 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314852
VERSION     XP_041314852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458918.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="major facilitator superfamily domain-containing
                     protein 10 isoform X2"
                     /calculated_mol_wt=51405
     Region          38..468
                     /region_name="MFS_MFSD10"
                     /note="Major facilitator superfamily domain-containing
                     protein 10; cd17389"
                     /db_xref="CDD:340947"
     Site            order(48..49,52..53,56,117,167..168,170..172,175,194,
                     197..198,201,301,304..305,308..310,313,341,345,394..395,
                     399,403,419,422..423,426..427,430)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340947"
     CDS             1..473
                     /gene="MFSD10"
                     /coded_by="XM_041458918.1:40..1461"
                     /db_xref="GeneID:121348904"
ORIGIN      
        1 mcsfiiwkqs sgnmalqerg tssspsndkq eqnynrviti vflalfidll gfalilplfp
       61 sildyysqte dgfylslqrg vdwfavmagi pperkynsvl fggligsifs llqffssplt
      121 gavsdhwgrr pvilvtvmgl iasyslwaas rtfgvfllsr iiggiskgnv slstaiiadl
      181 hsakarskgm amigvafslg ftlgpmmgay ltmqtekgev fylrsalsal vfsvadfifi
      241 flllpetlpk ekrvpsvasg fqaavdllsp lalfqfsavt rgkespseqn lqnlkilgla
      301 yflylflfsg leytlsflth qrfhfssmqq gkmfffigit maviqggyar rikpgneira
      361 vkraimllip aflligwaan vtmlsaglll ysfaaaivip clsavvsgyg tagqkgrvmg
      421 ilrslgalar algpilaaav ywlagaevcf ticgafflvp lallrsikqt kee
//
LOCUS       XP_041314861             467 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 10 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314861
VERSION     XP_041314861.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458927.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="major facilitator superfamily domain-containing
                     protein 10 isoform X3"
                     /calculated_mol_wt=50608
     Region          25..462
                     /region_name="MFS_MFSD10"
                     /note="Major facilitator superfamily domain-containing
                     protein 10; cd17389"
                     /db_xref="CDD:340947"
     Site            order(35..36,39..40,43,104,154..155,157..159,162,181,
                     184..185,188,288,291..292,295..297,300,328,332,381..382,
                     386,390,413,416..417,420..421,424)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340947"
     CDS             1..467
                     /gene="MFSD10"
                     /coded_by="XM_041458927.1:143..1546"
                     /db_xref="GeneID:121348904"
ORIGIN      
        1 malqergtss spsndkqeqn ynrvitivfl alfidllgfa lilplfpsil dyysqtedgf
       61 ylslqrgvdw favmagippe rkynsvlfgg ligsifsllq ffsspltgav sdhwgrrpvi
      121 lvtvmglias yslwaasrtf gvfllsriig giskgnvsls taiiadlhsa karskgmami
      181 gvafslgftl gpmmgayltm qtekgevfyl rsalsalvfs vadfififll lpetlpkekr
      241 vpsvasgfqa avdllsplal fqfsavtrgk espseqnlqn lkilglayfl ylflfsgley
      301 tlsflthqrf hfssmqqgkm fffigitmav iqggyarrik pgneiravkr aimllipafl
      361 ligwaanvtm lsaglllysf aaaivipcls avvsgyvshs actgtagqkg rvmgilrslg
      421 alaralgpil aaavywlaga evcfticgaf flvplallrs ikqtkee
//
LOCUS       XP_041314869             467 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 10 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314869
VERSION     XP_041314869.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458935.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="major facilitator superfamily domain-containing
                     protein 10 isoform X3"
                     /calculated_mol_wt=50608
     Region          25..462
                     /region_name="MFS_MFSD10"
                     /note="Major facilitator superfamily domain-containing
                     protein 10; cd17389"
                     /db_xref="CDD:340947"
     Site            order(35..36,39..40,43,104,154..155,157..159,162,181,
                     184..185,188,288,291..292,295..297,300,328,332,381..382,
                     386,390,413,416..417,420..421,424)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340947"
     CDS             1..467
                     /gene="MFSD10"
                     /coded_by="XM_041458935.1:216..1619"
                     /db_xref="GeneID:121348904"
ORIGIN      
        1 malqergtss spsndkqeqn ynrvitivfl alfidllgfa lilplfpsil dyysqtedgf
       61 ylslqrgvdw favmagippe rkynsvlfgg ligsifsllq ffsspltgav sdhwgrrpvi
      121 lvtvmglias yslwaasrtf gvfllsriig giskgnvsls taiiadlhsa karskgmami
      181 gvafslgftl gpmmgayltm qtekgevfyl rsalsalvfs vadfififll lpetlpkekr
      241 vpsvasgfqa avdllsplal fqfsavtrgk espseqnlqn lkilglayfl ylflfsgley
      301 tlsflthqrf hfssmqqgkm fffigitmav iqggyarrik pgneiravkr aimllipafl
      361 ligwaanvtm lsaglllysf aaaivipcls avvsgyvshs actgtagqkg rvmgilrslg
      421 alaralgpil aaavywlaga evcfticgaf flvplallrs ikqtkee
//
LOCUS       XP_041314877             467 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 10 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314877
VERSION     XP_041314877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458943.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="major facilitator superfamily domain-containing
                     protein 10 isoform X3"
                     /calculated_mol_wt=50608
     Region          25..462
                     /region_name="MFS_MFSD10"
                     /note="Major facilitator superfamily domain-containing
                     protein 10; cd17389"
                     /db_xref="CDD:340947"
     Site            order(35..36,39..40,43,104,154..155,157..159,162,181,
                     184..185,188,288,291..292,295..297,300,328,332,381..382,
                     386,390,413,416..417,420..421,424)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340947"
     CDS             1..467
                     /gene="MFSD10"
                     /coded_by="XM_041458943.1:258..1661"
                     /db_xref="GeneID:121348904"
ORIGIN      
        1 malqergtss spsndkqeqn ynrvitivfl alfidllgfa lilplfpsil dyysqtedgf
       61 ylslqrgvdw favmagippe rkynsvlfgg ligsifsllq ffsspltgav sdhwgrrpvi
      121 lvtvmglias yslwaasrtf gvfllsriig giskgnvsls taiiadlhsa karskgmami
      181 gvafslgftl gpmmgayltm qtekgevfyl rsalsalvfs vadfififll lpetlpkekr
      241 vpsvasgfqa avdllsplal fqfsavtrgk espseqnlqn lkilglayfl ylflfsgley
      301 tlsflthqrf hfssmqqgkm fffigitmav iqggyarrik pgneiravkr aimllipafl
      361 ligwaanvtm lsaglllysf aaaivipcls avvsgyvshs actgtagqkg rvmgilrslg
      421 alaralgpil aaavywlaga evcfticgaf flvplallrs ikqtkee
//
LOCUS       XP_041314888             494 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-glucose 6-dehydrogenase [Pyrgilauda ruficollis].
ACCESSION   XP_041314888
VERSION     XP_041314888.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458954.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="UDP-glucose 6-dehydrogenase"
                     /calculated_mol_wt=54914
     Region          4..464
                     /region_name="PLN02353"
                     /note="probable UDP-glucose 6-dehydrogenase"
                     /db_xref="CDD:177986"
     CDS             1..494
                     /gene="UGDH"
                     /coded_by="XM_041458954.1:214..1698"
                     /db_xref="GeneID:121348935"
ORIGIN      
        1 mfeikkicci gagyvggptc sviaqmcpsi kvtvvdvnea rinawnsdtl piyepglqev
       61 vescrgknlf fstsiddair eadlvfisvn tptktygmgk graadlkyie acarrivqns
      121 ngykivteks tvpvraaesi rrifdantkp nldlqvlsnp eflaegtaik dlknpdrvli
      181 ggddspegqk avralcavye hwvpkekilt tntwsselsk laanaflaqr issinsisal
      241 ceatgadvee varaigtdqr ignkflkasv gfggscfqkd vlnlvylcea lnlpevaryw
      301 qqvidmndyq rrrfasriid slfntvtdkk iailgfafkk dtgdtresss iyiskylmde
      361 gaklhiydpk vpkeqiifdl shlgvsednq vsrlvtiskd pyeacdgaha lvictewdmf
      421 keldyerihk kmlkpafifd grrvlddlhn elqvigfqie tigkkvsakr ipfassceip
      481 kfslqdppvk kprv
//
LOCUS       XP_041314901             568 aa            linear   VRT 06-MAY-2021
DEFINITION  protein NOXP20 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314901
VERSION     XP_041314901.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458967.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="protein NOXP20 isoform X1"
                     /calculated_mol_wt=61632
     Region          127..301
                     /region_name="DUF719"
                     /note="Protein of unknown function (DUF719); pfam05334"
                     /db_xref="CDD:461625"
     CDS             1..568
                     /gene="FAM114A1"
                     /coded_by="XM_041458967.1:576..2282"
                     /db_xref="GeneID:121348943"
ORIGIN      
        1 msedisdgtp seekpevmem pknevlphes vphlieneil gessqdqhgq vtqnvsngke
       61 gdividespl teklveslps nlpsseette dmptecietv sldaepelee tpheqsnpaa
      121 dssskasrwg awgtwgksll ssasatvghg itavkekagt tlrihsggsa sletaeppaa
      181 ettvtqaeds laqsssenip sspssgsrgm lsaitsavqn tgksvlsggl daleyigktt
      241 mnvlaesdpg fkrtktlmar tvslsqllre akekekqrra qqvtvertah ygllfdefqg
      301 lshlealeil sneseaqiqs hlatldgeql etvkndliai keifvpkeld devvqtqkad
      361 tgeefvsmlt ellfelhvaa tpdklnkark kahewleeas lstpvnieee lsekpeepge
      421 ektqkdnkie sdkteidksk tveeiymlsi eslaevtarc ieqlhkvael ilhgqevekt
      481 aqdqakvltn ltsamcnevs slskkfsdsv taagsnmkae flnpiinsvl legsnsttyi
      541 qdafqlllpv lqishiqtsc skawelsa
//
LOCUS       XP_041314909             477 aa            linear   VRT 06-MAY-2021
DEFINITION  protein NOXP20 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314909
VERSION     XP_041314909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="protein NOXP20 isoform X2"
                     /calculated_mol_wt=51681
     Region          36..210
                     /region_name="DUF719"
                     /note="Protein of unknown function (DUF719); pfam05334"
                     /db_xref="CDD:461625"
     CDS             1..477
                     /gene="FAM114A1"
                     /coded_by="XM_041458975.1:150..1583"
                     /db_xref="GeneID:121348943"
ORIGIN      
        1 mptecietvs ldaepeleet pheqsnpaad ssskasrwga wgtwgkslls sasatvghgi
       61 tavkekagtt lrihsggsas letaeppaae ttvtqaedsl aqsssenips spssgsrgml
      121 saitsavqnt gksvlsggld aleyigkttm nvlaesdpgf krtktlmart vslsqllrea
      181 kekekqrraq qvtvertahy gllfdefqgl shlealeils neseaqiqsh latldgeqle
      241 tvkndliaik eifvpkeldd evvqtqkadt geefvsmlte llfelhvaat pdklnkarkk
      301 ahewleeasl stpvnieeel sekpeepgee ktqkdnkies dkteidkskt veeiymlsie
      361 slaevtarci eqlhkvaeli lhgqevekta qdqakvltnl tsamcnevss lskkfsdsvt
      421 aagsnmkaef lnpiinsvll egsnsttyiq dafqlllpvl qishiqtscs kawelsa
//
LOCUS       XP_041314917             439 aa            linear   VRT 06-MAY-2021
DEFINITION  protein NOXP20 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041314917
VERSION     XP_041314917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458983.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..439
                     /product="protein NOXP20 isoform X3"
                     /calculated_mol_wt=47672
     Region          19..172
                     /region_name="DUF719"
                     /note="Protein of unknown function (DUF719); pfam05334"
                     /db_xref="CDD:461625"
     CDS             1..439
                     /gene="FAM114A1"
                     /coded_by="XM_041458983.1:1..1320"
                     /db_xref="GeneID:121348943"
ORIGIN      
        1 mgslgylgkv spvisfchsh gitavkekag ttlrihsggs asletaeppa aettvtqaed
       61 slaqssseni psspssgsrg mlsaitsavq ntgksvlsgg ldaleyigkt tmnvlaesdp
      121 gfkrtktlma rtvslsqllr eakekekqrr aqqvtverta hygllfdefq glshlealei
      181 lsneseaqiq shlatldgeq letvkndlia ikeifvpkel ddevvqtqka dtgeefvsml
      241 tellfelhva atpdklnkar kkahewleea slstpvniee elsekpeepg eektqkdnki
      301 esdkteidks ktveeiymls ieslaevtar cieqlhkvae lilhgqevek taqdqakvlt
      361 nltsamcnev sslskkfsds vtaagsnmka eflnpiinsv llegsnstty iqdafqlllp
      421 vlqishiqts cskawelsa
//
LOCUS       XP_041314927             205 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 165 [Pyrgilauda ruficollis].
ACCESSION   XP_041314927
VERSION     XP_041314927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041458993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="transmembrane protein 165"
                     /calculated_mol_wt=22189
     Region          1..198
                     /region_name="Gdt1"
                     /note="Putative Ca2+/H+ antiporter, TMEM165/GDT1 family
                     [General function prediction only]; COG2119"
                     /db_xref="CDD:441722"
     CDS             1..205
                     /gene="TMEM165"
                     /coded_by="XM_041458993.1:758..1375"
                     /db_xref="GeneID:121348964"
ORIGIN      
        1 mamrynrltv lagamlalgl mtclsvlfgy attviprvyt yyvstalfai fgirmlregl
       61 kmspdegqee leevqaeikk kdeelqrtkl lngpgdvesg pgttipqkkw lhfispifvq
      121 aftltflaew gdrsqlttiv laaredpygv avggtvghcl ctglaviggr miaqkisvrt
      181 vtiiggivfl afafsalfis pdsgf
//
LOCUS       XP_041314936             205 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 165 [Pyrgilauda ruficollis].
ACCESSION   XP_041314936
VERSION     XP_041314936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="transmembrane protein 165"
                     /calculated_mol_wt=22189
     Region          1..198
                     /region_name="Gdt1"
                     /note="Putative Ca2+/H+ antiporter, TMEM165/GDT1 family
                     [General function prediction only]; COG2119"
                     /db_xref="CDD:441722"
     CDS             1..205
                     /gene="TMEM165"
                     /coded_by="XM_041459002.1:296..913"
                     /db_xref="GeneID:121348964"
ORIGIN      
        1 mamrynrltv lagamlalgl mtclsvlfgy attviprvyt yyvstalfai fgirmlregl
       61 kmspdegqee leevqaeikk kdeelqrtkl lngpgdvesg pgttipqkkw lhfispifvq
      121 aftltflaew gdrsqlttiv laaredpygv avggtvghcl ctglaviggr miaqkisvrt
      181 vtiiggivfl afafsalfis pdsgf
//
LOCUS       XP_041314948            1280 aa            linear   VRT 06-MAY-2021
DEFINITION  limbin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041314948
VERSION     XP_041314948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1280
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1280
                     /product="limbin isoform X1"
                     /calculated_mol_wt=145808
     Region          201..631
                     /region_name="EVC2_like"
                     /note="Ellis van Creveld protein 2 like protein;
                     pfam12297"
                     /db_xref="CDD:463525"
     CDS             1..1280
                     /gene="EVC2"
                     /coded_by="XM_041459014.1:3..3845"
                     /db_xref="GeneID:121348977"
ORIGIN      
        1 mrwplaglll allpgglsas aqplaagtgr gpprepcgrt aagvfeddlw lqkemgclgm
       61 aavplpvvie astappqllt saasdgqwsh slfalmpswt kkvvfkresd vshlppedvs
      121 nmsvssefgi tlqkcgmvdv ehdpqtayit lvinntntll stnitdlilm dnitglhvqk
      181 nsgnkttngi qiyrksflqg gehfainysa lldaeemwhg rvltlpaklt frsasqnrth
      241 lisltaslti teeektkily shaisasaff iaffvslvlt cavffiiyrt qilkwsfcsk
      301 nqeiqpdlsq shklehsqfn sgdlfsedii mndqiidils feepgnmhqa ledlevaslt
      361 radagleasr tqickeviam mmknmvlnhs lvphvekkis svfkkrflam eeeiqeeyer
      421 kmvaltaecn letrktmeaq cqkaraanee aeelmkkiye kpaieyrsll dklhrleqdc
      481 lkrflfvkqe eyfakayrel aitqrkelht ifftqitnat skgelkveaa ktlvegyskv
      541 qgdieelmdf lqackryhls krfsyreyli skvqsrdsrv salinaaaaq ilslinkter
      601 aghlpeshlg illdraeaei nfvkqkfdhd lkqekqklcq klitkrrqem lqkqkehqke
      661 qlsledpfkt tdeishylrh wknllsdhtt efeeltekld neaseelkel lfslaekave
      721 elkhvqcgvf vqelvklnvp klflleavee hkkemvvkha qlereehdks maaeellqlt
      781 rqklsqelet giseqkkirs weqsifmqll slplslseee lltmrqelhc cfsqvdssla
      841 wpkirarall qafemeqrds evlkveqnla mtneqqhskm gktgsrnrnk ldilkkslqd
      901 kiliyedsvk genlnrikye lqlekechlr nlenklgeys asvafqktvk kskmlelyta
      961 iinvqallfe qlntsktlsk leciqileah npeieeiekk leyemlhkes vqqhltsrqr
     1021 wildglgftn epvdtsaerh vtvllrqamn kcrqfinlyq qslrdeqwnc vvledllenv
     1081 etnaflaiys qelrlagyla kltrvpmgvl hralnlllps ssqsevlsvl dsiskysdga
     1141 vesdsnades gsckkrksqe mwqtlenkir qdlinrslek ipslnkrkds likkkqlavl
     1201 ekaafihlgc spayppvgqp dppvslnsat aeaielsdtg ekiflfreps dpkpalatfp
     1261 rkkkknflns kkaahanmds
//
LOCUS       XP_041314956            1279 aa            linear   VRT 06-MAY-2021
DEFINITION  limbin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041314956
VERSION     XP_041314956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1279
                     /product="limbin isoform X2"
                     /calculated_mol_wt=145680
     Region          201..631
                     /region_name="EVC2_like"
                     /note="Ellis van Creveld protein 2 like protein;
                     pfam12297"
                     /db_xref="CDD:463525"
     CDS             1..1279
                     /gene="EVC2"
                     /coded_by="XM_041459022.1:3..3842"
                     /db_xref="GeneID:121348977"
ORIGIN      
        1 mrwplaglll allpgglsas aqplaagtgr gpprepcgrt aagvfeddlw lqkemgclgm
       61 aavplpvvie astappqllt saasdgqwsh slfalmpswt kkvvfkresd vshlppedvs
      121 nmsvssefgi tlqkcgmvdv ehdpqtayit lvinntntll stnitdlilm dnitglhvqk
      181 nsgnkttngi qiyrksflqg gehfainysa lldaeemwhg rvltlpaklt frsasqnrth
      241 lisltaslti teeektkily shaisasaff iaffvslvlt cavffiiyrt qilkwsfcsk
      301 nqeiqpdlsq shklehsqfn sgdlfsedii mndqiidils feepgnmhqa ledlevaslt
      361 radagleasr tqickeviam mmknmvlnhs lvphvekkis svfkkrflam eeeiqeeyer
      421 kmvaltaecn letrktmeaq cqkaraanee aeelmkkiye kpaieyrsll dklhrleqdc
      481 lkrflfvkqe eyfakayrel aitqrkelht ifftqitnat skgelkveaa ktlvegyskv
      541 qgdieelmdf lqackryhls krfsyreyli skvqsrdsrv salinaaaaq ilslinkter
      601 aghlpeshlg illdraeaei nfvkqkfdhd lkqekqklcq klitkrrqem lqkkehqkeq
      661 lsledpfktt deishylrhw knllsdhtte feeltekldn easeelkell fslaekavee
      721 lkhvqcgvfv qelvklnvpk lflleaveeh kkemvvkhaq lereehdksm aaeellqltr
      781 qklsqeletg iseqkkirsw eqsifmqlls lplslseeel ltmrqelhcc fsqvdsslaw
      841 pkirarallq afemeqrdse vlkveqnlam tneqqhskmg ktgsrnrnkl dilkkslqdk
      901 iliyedsvkg enlnrikyel qlekechlrn lenklgeysa svafqktvkk skmlelytai
      961 invqallfeq lntsktlskl eciqileahn peieeiekkl eyemlhkesv qqhltsrqrw
     1021 ildglgftne pvdtsaerhv tvllrqamnk crqfinlyqq slrdeqwncv vledllenve
     1081 tnaflaiysq elrlagylak ltrvpmgvlh ralnlllpss sqsevlsvld siskysdgav
     1141 esdsnadesg sckkrksqem wqtlenkirq dlinrsleki pslnkrkdsl ikkkqlavle
     1201 kaafihlgcs payppvgqpd ppvslnsata eaielsdtge kiflfrepsd pkpalatfpr
     1261 kkkknflnsk kaahanmds
//
LOCUS       XP_041314967             983 aa            linear   VRT 06-MAY-2021
DEFINITION  ellis-van Creveld syndrome protein [Pyrgilauda ruficollis].
ACCESSION   XP_041314967
VERSION     XP_041314967.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459033.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="ellis-van Creveld syndrome protein"
                     /calculated_mol_wt=112985
     CDS             1..983
                     /gene="EVC"
                     /coded_by="XM_041459033.1:24..2975"
                     /db_xref="GeneID:121348988"
ORIGIN      
        1 maavegclra vglqfwadsl qalpallapa allglllgaa aaallcrcal gprrggekdd
       61 sqrllesfna dekehtlmks kaepytskee mvleesespl nsniaafalk akviypinqk
      121 frpladgssn pslhenpkqa vlpnqvvets msgslgslsq gdkedcssst tihsttsddr
      181 fqaraflkva sfpevltces fdvklclcsl tlqdlmlldt elrkekyvmf iqifkihltd
      241 fhrkkkitdg llkkillnqe ndfeelqkql dsrlqntems garnsefqtl edlerrerey
      301 sehvidnmea fwkqtdkaqq dfldqskcss akamkimmdl tekmiavesl lsesqdlqam
      361 diqerlfnwe lmvkmidslk ssipeeckgr lntvsnildh ltvknnlsvr qkeelltdlh
      421 kafweqlahy snecmqqskd lilkrlecra kkkeefkrrq eaeresllsk tfltedvhhf
      481 lkayhelmek hwqaqwdlee eddcesteav aglykelysk ashalaelvt elflqtlpvv
      541 tslsvrecel lkeewqenlv pqlkkwenhr qrrwklfqeq llqekelwit eyalsavmqk
      601 hlsekqekim qgvvsrlgcl sdesvssilq kqqlllcsvl rrltlrragm aalarmrlsr
      661 kksslqelre qhtlqkgssl cqdedqwqlq kaveshiree eekleeemqe tnlefhqqlv
      721 teiqealqfl qqhmeqvigq tllqyargea ekkssddeqd fkerlvesav esvygtsnni
      781 nrlvqnyyqq lgklteeyeg kklqhlkslq aegnerirtk nkenelalke khtkgllnvs
      841 stvhqrmvlq qnkilaqfel rqqirleslk qkllglqhlg telesqlrga eqdfvselav
      901 ltrvpltvkk kpskrskpag ekanskrqtf qspkpaekdd sheniqephg itsglcrems
      961 qsshegetep rknskmlkkk gsr
//
LOCUS       XP_041314980             831 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314980
VERSION     XP_041314980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..831
                     /product="fibroblast growth factor receptor 3 isoform X1"
                     /calculated_mol_wt=92033
     Region          <79..148
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          82..86
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          94..98
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..119
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          139..144
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          170..264
                     /region_name="IgI_2_FGFR"
                     /note="Second immunoglobulin (Ig)-like domain of
                     fibroblast growth factor (FGF) receptor; member of the
                     I-set of IgSF domains; cd05857"
                     /db_xref="CDD:409443"
     Region          170..173
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409443"
     Region          181..186
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409443"
     Site            order(182,184,186)
                     /site_type="other"
                     /note="FGF binding site [polypeptide binding]"
                     /db_xref="CDD:409443"
     Site            order(183,190..192,194)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409443"
     Region          190..198
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409443"
     Region          204..209
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409443"
     Region          212..214
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409443"
     Region          223..226
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409443"
     Region          230..235
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409443"
     Region          244..251
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409443"
     Region          254..264
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409443"
     Region          272..376
                     /region_name="IgI_3_FGFR2"
                     /note="Third immunoglobulin (Ig)-like domain of fibroblast
                     growth factor receptor 2 (FGFR2); member of the I-set of
                     Ig superfamily (IgSF) domains; cd05858"
                     /db_xref="CDD:409444"
     Region          272..275
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409444"
     Region          279..283
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409444"
     Region          291..298
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409444"
     Site            order(296,301..303,332..333,337,341,362)
                     /site_type="other"
                     /note="polypeptide ligand binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409444"
     Region          302..309
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409444"
     Region          324..329
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409444"
     Region          341..346
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409444"
     Region          354..362
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409444"
     Region          365..373
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409444"
     Region          478..811
                     /region_name="PTKc_FGFR3"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fibroblast Growth Factor Receptor 3; cd05100"
                     /db_xref="CDD:173652"
     Site            order(497..498,500,502..503,505,525,527,574..577,580..581,
                     636,640..641,643,654,672..676,685,719)
                     /site_type="active"
                     /db_xref="CDD:173652"
     Site            order(497..498,500,502..503,505,525,527,574..577,580..581,
                     640..641,643,654)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173652"
     Site            order(636,640,672..676,685,719)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173652"
     Site            653..678
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173652"
     CDS             1..831
                     /gene="FGFR3"
                     /coded_by="XM_041459046.1:1..2496"
                     /db_xref="GeneID:121348993"
ORIGIN      
        1 mseaggaaaa alprrrsggm raawgsvwcl claaavggmp aarrqgskav aaaersggqp
       61 aeylrsetaf leelvfgngd tielscntqg ssvsvfwfkd gigiaptnrt higqkllkii
      121 nvsyddsgly sckprhsnev lgnftvrvtd spssgddedd ddesedtgvp fwtrpdkmek
      181 kllavpaant vrfrcpaggn ptpsiywlkn gkefkgehri ggiklrhqqw slvmesvvps
      241 drgnytcvve nkygnirhty qldvlersph rpilqaglpa nqtvvvgsnv efhckvysda
      301 qphiqwlkhv evngskygpd gtpyvtvlkt agvnttdkel eilylrnvtf edageytcla
      361 gnsigfshhs awltvlpaee lmemddsgsv ytgilsygtg ffllllvlvl vivwrmkmpn
      421 kkamntptvq kvskfplkrq qvslesnssm nsntplvrit rlsssdgpml anvselelpp
      481 dpkweltrsr ltlgkplgeg cfgqvvmaea igidkdkpnk aitvavkmlk ddatdkdlsd
      541 lvsememmkm igkhkniinl lgactqdgpl yvlveyaskg nlreylrarr ppgmdysfdt
      601 cklpeeqltf kdlvscayqv argmeylasq kcihrdlaar nvlvtednvm kiadfglard
      661 vhnidyykkt tngrlpvkwm apealfdrvy thqsdvwsfg vllweiftlg gspypgipve
      721 elfkllkegh rmdkpancth dlymimrecw havpsqrptf kqlvedldrv ltvtstdeyl
      781 dlsvpfeqys pagqdthstc ssgddsvfah dllpdepclp khppcngvir t
//
LOCUS       XP_041314988             830 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041314988
VERSION     XP_041314988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459054.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..830
                     /product="fibroblast growth factor receptor 3 isoform X2"
                     /calculated_mol_wt=91905
     Region          <79..148
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          82..86
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          94..98
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..119
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          139..144
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          170..264
                     /region_name="IgI_2_FGFR"
                     /note="Second immunoglobulin (Ig)-like domain of
                     fibroblast growth factor (FGF) receptor; member of the
                     I-set of IgSF domains; cd05857"
                     /db_xref="CDD:409443"
     Region          170..173
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409443"
     Region          181..186
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409443"
     Site            order(182,184,186)
                     /site_type="other"
                     /note="FGF binding site [polypeptide binding]"
                     /db_xref="CDD:409443"
     Site            order(183,190..192,194)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409443"
     Region          190..198
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409443"
     Region          204..209
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409443"
     Region          212..214
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409443"
     Region          223..226
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409443"
     Region          230..235
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409443"
     Region          244..251
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409443"
     Region          254..264
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409443"
     Region          272..376
                     /region_name="IgI_3_FGFR2"
                     /note="Third immunoglobulin (Ig)-like domain of fibroblast
                     growth factor receptor 2 (FGFR2); member of the I-set of
                     Ig superfamily (IgSF) domains; cd05858"
                     /db_xref="CDD:409444"
     Region          272..275
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409444"
     Region          279..283
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409444"
     Region          291..298
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409444"
     Site            order(296,301..303,332..333,337,341,362)
                     /site_type="other"
                     /note="polypeptide ligand binding site [polypeptide
                     binding]"
                     /db_xref="CDD:409444"
     Region          302..309
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409444"
     Region          324..329
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409444"
     Region          341..346
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409444"
     Region          354..362
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409444"
     Region          365..373
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409444"
     Region          477..810
                     /region_name="PTKc_FGFR3"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fibroblast Growth Factor Receptor 3; cd05100"
                     /db_xref="CDD:173652"
     Site            order(496..497,499,501..502,504,524,526,573..576,579..580,
                     635,639..640,642,653,671..675,684,718)
                     /site_type="active"
                     /db_xref="CDD:173652"
     Site            order(496..497,499,501..502,504,524,526,573..576,579..580,
                     639..640,642,653)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173652"
     Site            order(635,639,671..675,684,718)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173652"
     Site            652..677
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173652"
     CDS             1..830
                     /gene="FGFR3"
                     /coded_by="XM_041459054.1:1..2493"
                     /db_xref="GeneID:121348993"
ORIGIN      
        1 mseaggaaaa alprrrsggm raawgsvwcl claaavggmp aarrqgskav aaaersggqp
       61 aeylrsetaf leelvfgngd tielscntqg ssvsvfwfkd gigiaptnrt higqkllkii
      121 nvsyddsgly sckprhsnev lgnftvrvtd spssgddedd ddesedtgvp fwtrpdkmek
      181 kllavpaant vrfrcpaggn ptpsiywlkn gkefkgehri ggiklrhqqw slvmesvvps
      241 drgnytcvve nkygnirhty qldvlersph rpilqaglpa nqtvvvgsnv efhckvysda
      301 qphiqwlkhv evngskygpd gtpyvtvlkt agvnttdkel eilylrnvtf edageytcla
      361 gnsigfshhs awltvlpaee lmemddsgsv ytgilsygtg ffllllvlvl vivwrmkmpn
      421 kkamntptvq kvskfplkrq vslesnssmn sntplvritr lsssdgpmla nvselelppd
      481 pkweltrsrl tlgkplgegc fgqvvmaeai gidkdkpnka itvavkmlkd datdkdlsdl
      541 vsememmkmi gkhkniinll gactqdgply vlveyaskgn lreylrarrp pgmdysfdtc
      601 klpeeqltfk dlvscayqva rgmeylasqk cihrdlaarn vlvtednvmk iadfglardv
      661 hnidyykktt ngrlpvkwma pealfdrvyt hqsdvwsfgv llweiftlgg spypgipvee
      721 lfkllkeghr mdkpancthd lymimrecwh avpsqrptfk qlvedldrvl tvtstdeyld
      781 lsvpfeqysp agqdthstcs sgddsvfahd llpdepclpk hppcngvirt
//
LOCUS       XP_041315012             630 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase Tec isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041315012
VERSION     XP_041315012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..630
                     /product="tyrosine-protein kinase Tec isoform X1"
                     /calculated_mol_wt=73276
     Region          7..147
                     /region_name="PH_Btk"
                     /note="Bruton's tyrosine kinase pleckstrin homology (PH)
                     domain; cd01238"
                     /db_xref="CDD:269944"
     Site            order(9..10,28..30,43,93)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269944"
     Site            order(13,15..16,18..19,25,29,51)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269944"
     Site            order(120,131..132,142)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:269944"
     Region          184..238
                     /region_name="SH3_Tec"
                     /note="Src Homology 3 domain of Tec (Tyrosine kinase
                     expressed in hepatocellular carcinoma); cd11905"
                     /db_xref="CDD:212838"
     Site            order(189,191,194,198,216..217,231,233..234)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212838"
     Region          241..348
                     /region_name="SH2_Tec_Itk"
                     /note="Src homology 2 (SH2) domain found in Tec protein,
                     IL2-inducible T-cell kinase (Itk); cd10396"
                     /db_xref="CDD:198259"
     Site            order(255,274)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198259"
     Site            order(330,338..339)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198259"
     Region          366..625
                     /region_name="PTKc_Tec_Rlk"
                     /note="Catalytic domain of the Protein Tyrosine Kinases,
                     Tyrosine kinase expressed in hepatocellular carcinoma and
                     Resting lymphocyte kinase; cd05114"
                     /db_xref="CDD:270685"
     Site            order(377..378,385,397,399,418,441,443..447,449,490,494,
                     497,507..508,511,525..529,538,572)
                     /site_type="active"
                     /db_xref="CDD:270685"
     Site            order(377..378,385,397,399,418,441,443..447,449,494,497,
                     507..508,511)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270685"
     Site            order(490,494,525..529,538,572)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270685"
     Site            507..531
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270685"
     CDS             1..630
                     /gene="TEC"
                     /coded_by="XM_041459078.1:283..2175"
                     /db_xref="GeneID:121349012"
ORIGIN      
        1 mntttilqei likrsqqkkr tsplnykerl fvltksmlty yegraekkyr kgsvdisrik
       61 cvevvksdgi ipcqnkypfq vvydantlyi fapsaqsrdq wvrnlkeeik nnsnimvkyh
      121 pkfwtegiyq ccrqteklap gceryslfen nvmrlsssmp eksarrpppp appveengne
      181 eeeivvamyd feptehhdlr lekgeeytvi ekndihwwra kdkygkqgyi psnyvtgkks
      241 nnldqyewys rnlnrskaeq llrnedkegg fvvrdssqpg lytvslytkf ggeglsgirh
      301 yhiketvtsp kqyylaekhl fnsipeiiey hshnaaglvt rlrypvtpkr ttapttagfs
      361 yekweinpse ltfmrelgsg lfgvvrlgkw raqykvaika iregamyeed fieeakvmmk
      421 lthpklvqly gvctqqrpiy ivtefmehgc llnylrqkrg vlskdtlltm cqdvcegmey
      481 lernsfihrd laarnclvsd sgvvkvsdfg mtryvlddqy tsssgakfpv kwcppevfny
      541 srfssksdvw sfgvlmwevy tegkmpfeks snyevvtmvs qghrlyrpkl ackqmyemmm
      601 mcwqekpeer ptfeellhai idiaegedaf
//
LOCUS       XP_041315017             605 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase Tec isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315017
VERSION     XP_041315017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..605
                     /product="tyrosine-protein kinase Tec isoform X2"
                     /calculated_mol_wt=70540
     Region          7..147
                     /region_name="PH_Btk"
                     /note="Bruton's tyrosine kinase pleckstrin homology (PH)
                     domain; cd01238"
                     /db_xref="CDD:269944"
     Site            order(9..10,28..30,43,93)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269944"
     Site            order(13,15..16,18..19,25,29,51)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269944"
     Site            order(120,131..132,142)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:269944"
     Region          184..238
                     /region_name="SH3_Tec"
                     /note="Src Homology 3 domain of Tec (Tyrosine kinase
                     expressed in hepatocellular carcinoma); cd11905"
                     /db_xref="CDD:212838"
     Site            order(189,191,194,198,216..217,231,233..234)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212838"
     Region          241..336
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(255,274,300,302)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(301,330)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          341..600
                     /region_name="PTKc_Tec_Rlk"
                     /note="Catalytic domain of the Protein Tyrosine Kinases,
                     Tyrosine kinase expressed in hepatocellular carcinoma and
                     Resting lymphocyte kinase; cd05114"
                     /db_xref="CDD:270685"
     Site            order(352..353,360,372,374,393,416,418..422,424,465,469,
                     472,482..483,486,500..504,513,547)
                     /site_type="active"
                     /db_xref="CDD:270685"
     Site            order(352..353,360,372,374,393,416,418..422,424,469,472,
                     482..483,486)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270685"
     Site            order(465,469,500..504,513,547)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270685"
     Site            482..506
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270685"
     CDS             1..605
                     /gene="TEC"
                     /coded_by="XM_041459083.1:283..2100"
                     /db_xref="GeneID:121349012"
ORIGIN      
        1 mntttilqei likrsqqkkr tsplnykerl fvltksmlty yegraekkyr kgsvdisrik
       61 cvevvksdgi ipcqnkypfq vvydantlyi fapsaqsrdq wvrnlkeeik nnsnimvkyh
      121 pkfwtegiyq ccrqteklap gceryslfen nvmrlsssmp eksarrpppp appveengne
      181 eeeivvamyd feptehhdlr lekgeeytvi ekndihwwra kdkygkqgyi psnyvtgkks
      241 nnldqyewys rnlnrskaeq llrnedkegg fvvrdssqpg lytvslytkf ggeglsgirh
      301 yhiketvtsp kqyylaekhl fnsipeiiey hshnaaekwe inpseltfmr elgsglfgvv
      361 rlgkwraqyk vaikairega myeedfieea kvmmklthpk lvqlygvctq qrpiyivtef
      421 mehgcllnyl rqkrgvlskd tlltmcqdvc egmeylerns fihrdlaarn clvsdsgvvk
      481 vsdfgmtryv lddqytsssg akfpvkwcpp evfnysrfss ksdvwsfgvl mwevytegkm
      541 pfekssnyev vtmvsqghrl yrpklackqm yemmmmcwqe kpeerptfee llhaiidiae
      601 gedaf
//
LOCUS       XP_041315021             362 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase TM129 [Pyrgilauda ruficollis].
ACCESSION   XP_041315021
VERSION     XP_041315021.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459087.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="E3 ubiquitin-protein ligase TM129"
                     /calculated_mol_wt=40772
     Region          17..359
                     /region_name="Tmpp129"
                     /note="Putative transmembrane protein precursor;
                     pfam10272"
                     /db_xref="CDD:463039"
     CDS             1..362
                     /gene="TMEM129"
                     /coded_by="XM_041459087.1:264..1352"
                     /db_xref="GeneID:121349033"
ORIGIN      
        1 mespavtftl aylvfavcfv fppdevrsag ltvqgllsaw lgsedaafvq yhlrrstgtl
       61 lahsllplgy ylgmcfaape khlcffylas kewktffffa vllpaitsal ayywsrkgwn
      121 nhplartlav halpqsgwra vassintefr ridkfatgap garvivtdtw vikvttyclh
      181 vaqqqdihlt vtdsrqhelt pdsnvpvqfl tirvasvnpy ikafdirlns teygelrekl
      241 rapisnaanv vihqslsdlf letftslvei nqtyhvpstq elepcigcmq tianiklikn
      301 cqepnegecq qcycrpmwcl tcmgkwfasr qdqqhpetwl ssqvpcptcr akfcildvcl
      361 ir
//
LOCUS       XP_041315035             310 aa            linear   VRT 06-MAY-2021
DEFINITION  glutaredoxin domain-containing cysteine-rich protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315035
VERSION     XP_041315035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="glutaredoxin domain-containing cysteine-rich
                     protein 1"
                     /calculated_mol_wt=34339
     Region          158..305
                     /region_name="GRX_GRX_like"
                     /note="Glutaredoxin (GRX) family, GRX-like domain
                     containing protein subfamily; composed of uncharacterized
                     eukaryotic proteins containing a GRX-like domain having
                     only one conserved cysteine, aligning to the C-terminal
                     cysteine of the CXXC motif of GRXs. This...; cd03031"
                     /db_xref="CDD:239329"
     Site            order(164,173..175,217..218)
                     /site_type="other"
                     /note="putative GSH binding site [chemical binding]"
                     /db_xref="CDD:239329"
     Site            176
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239329"
     CDS             1..310
                     /gene="GRXCR1"
                     /coded_by="XM_041459101.1:1..933"
                     /db_xref="GeneID:121349040"
ORIGIN      
        1 mgttleqckl llsmeeamfk gevkadserl lrkvrfrvas shsgrvlkev yadgeaadsl
       61 dseyassset dqtsrlseld gqqnghvgse cdendneqdd llilvratke kgfgtkrvni
      121 lskngtvrgv khkvsagqal fdnlakvfqv stvpefgriv iyttslrvvr ttfercelvr
      181 kifqnhrvkf eeknialnsd ygkeldercr svcevpslpv vfidghylgg aekillmnes
      241 gelqdlltki ervqhpqecp scggfgflpc sachgskmsv frncftdsfk alkctacnen
      301 glqrcrscag
//
LOCUS       XP_041315046             280 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-B2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315046
VERSION     XP_041315046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459112.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..280
                     /product="homeobox protein Hox-B2"
                     /calculated_mol_wt=30408
     Region          136..192
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..280
                     /gene="HOXB2"
                     /coded_by="XM_041459112.1:176..1018"
                     /db_xref="GeneID:121349047"
ORIGIN      
        1 mnfefereig finsqpslae cltslpavle tfqtssikds tlipppfeqs vlqslspcsg
       61 srasprspsr aphgparppa qpgpraaqfp wmkekksskr tsqapsppss sssslpvpaa
      121 gspaeaaglp esggsrrlrt aytntqllel ekefhfnkyl crprrveiaa llqlterqvk
      181 vwfqnrrmkh krqtqhkeep vsagrdesge aercpalgat eesaapelga faaepcpela
      241 rgfspaaegs lgsplrfsee eleffssalc tmdlqdldfp
//
LOCUS       XP_041315059             491 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4-kinase type 2-beta [Pyrgilauda ruficollis].
ACCESSION   XP_041315059
VERSION     XP_041315059.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459125.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="phosphatidylinositol 4-kinase type 2-beta"
                     /calculated_mol_wt=55246
     Region          140..437
                     /region_name="PI3_PI4_kinase"
                     /note="Phosphatidylinositol 3- and 4-kinase; pfam00454"
                     /db_xref="CDD:395364"
     CDS             1..491
                     /gene="PI4K2B"
                     /coded_by="XM_041459125.1:44..1519"
                     /db_xref="GeneID:121349057"
ORIGIN      
        1 maepgaeepd erllllvesp psppqaelpr rgpqsaraap ggavrqcgep gleevedsde
       61 sedsgpegdg edepllrasc sgrgrragaa wdkerraaag htghtadmni flddpefaei
      121 ilkteqaiec gvfperisqg ssgsyfakdp kgkiigvfkp kseepyghln pkwtkyfhkv
      181 ccpccfgrgc lvpnqgylse agaylvdekl glgvvpktkv vwlvsetfny saidraksrg
      241 kkyalekvpk vakkfnrigl ppkvgsfqlf vegykeadyw lrkfeadplp entrkefqsq
      301 ferlvildyv irntdrgndn wlvryekqdd gldlsdkdsq wtitkesiki aaidnglafp
      361 fkhpdewray pfhwawlpqa kvpfsqetrd lvlprlsdmn fvqdlcedly elfktdkgfd
      421 katfenqmsv mrgqilnltq alkdekspiq lvqmprvive rsstgsqgri vhlsnaftqt
      481 fhsrkpffss w
//
LOCUS       XP_041315071            1015 aa            linear   VRT 06-MAY-2021
DEFINITION  epididymis-specific alpha-mannosidase [Pyrgilauda ruficollis].
ACCESSION   XP_041315071
VERSION     XP_041315071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1015
                     /product="epididymis-specific alpha-mannosidase"
                     /calculated_mol_wt=115344
     Region          25..798
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     Region          25..350
                     /region_name="GH38N_AMII_Epman_like"
                     /note="N-terminal catalytic domain of mammalian
                     core-specific lysosomal alpha 1,6-mannosidase and similar
                     proteins; glycoside hydrolase family 38 (GH38); cd10811"
                     /db_xref="CDD:212122"
     Site            order(34,36,39,149,151,173,286..287,289)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212122"
     CDS             1..1015
                     /gene="MAN2B2"
                     /coded_by="XM_041459137.1:34..3081"
                     /db_xref="GeneID:121349062"
ORIGIN      
        1 maaprmlllp llpllallpr aggelrafvv ahshmdvgwv ytvqesmhay aanvyttvie
       61 elmkgkqrkf iaveqeffrl wwdmvatdtq kqqvhqllqe grlefviggq vmhdeavtli
      121 ddqilqlteg hgflyetfgf rpqfswhvdp fgasattptl falagfnahl isridydlka
      181 dmqknkklqf vwqgspslsa rqeifthvmd qysyctpsql pfsnrsgffw ngfatfpdpp
      241 kdgvypnmsl pvtdanlhqy aqtmvanike raawfrtgdv lwpwgcdkqf fnasvqysnm
      301 dllvdyinkh saefgvtvqy atvsdffqav ysrnltweir dsqdflpyst epfqawtgfy
      361 tsrstlkgia rrassllhag esfftqyvlk npegsickck alkqlqslrw avsevqhhdg
      421 itgtespkvk dmymnnlmyg mfnvkklmas iifdinnakk ngevyssvyt knsgkpgadv
      481 dlyvvvynpl awnittfvtv svsseamsvy delghsvpaq vqssvesqst ydlyilvais
      541 glsyrkysik pldgqqaafv gssvkykrrd ltragqksqq lfpvvnscyq ilfdqntnlm
      601 hsitdretnq tvqftqefle yhvngdtkkg pisdnylfap nasavpvska vglevmsgnl
      661 mteirqyfys nvtsqeyiya vytrlysvpe gydgkllcrr ieqeysagpl elnreavlrt
      721 stnlntkqll ytdnngyqmq rrpfkayvnn tvarnyypvv qaayiedgtt rlmllaerah
      781 gvssqgngqv evmlhrrlwn nlewdlnnnl tlndssvvrp viwlilgtka vtstlyrtsg
      841 lalehrpvvm fgalsggdkp klprqlqqns vhdlpvtvpp nlhlqtlsip gwryssnhte
      901 qvrsihmgeq kqgdadfsrv llrirhlyei gedpvlsqpv mvdlksllkg lgsvmaveer
      961 sltgtwdvst lerwkwktaq ypgkrffnst disedfivtv hpkeirtffv yfqvq
//
LOCUS       XP_041315084             224 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase isozyme L1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315084
VERSION     XP_041315084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459150.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..224
                     /product="ubiquitin carboxyl-terminal hydrolase isozyme
                     L1"
                     /calculated_mol_wt=25070
     Region          3..220
                     /region_name="Peptidase_C12_UCH_L1_L3"
                     /note="Cysteine peptidase C12 containing ubiquitin
                     carboxyl-terminal hydrolase (UCH) families L1 and L3;
                     cd09616"
                     /db_xref="CDD:187737"
     Site            order(5..10,30..33,52,90,161,163,206)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:187737"
     Site            order(5,84,88,90,161..162)
                     /site_type="inhibition"
                     /note="inhibitor binding site [chemical binding]"
                     /db_xref="CDD:187737"
     Site            order(84,90,162,177)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:187737"
     CDS             1..224
                     /gene="UCHL1"
                     /coded_by="XM_041459150.1:101..775"
                     /db_xref="GeneID:121349072"
ORIGIN      
        1 mawqpmeinp emlnkvlsrl gvgpgwrfvd vlgfedealr avptpacall llfplteqhe
       61 nfrkqqteki kdqeisskvy flkqtvsnsc gtiglihava nnkdklklee gsalkkflde
      121 tadlspeera khlannkaiq evhnsvaqeg qcrvednsvn fhfilfvnvd ghlyeldgrm
      181 pfpvnhgtss ddlllkdsak icrqfterek gevrfsavaf cksa
//
LOCUS       XP_041315104             434 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD8 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315104
VERSION     XP_041315104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="BTB/POZ domain-containing protein KCTD8 isoform
                     X1"
                     /calculated_mol_wt=49155
     Region          24..131
                     /region_name="BTB_POZ_KCTD8"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein KCTD8;
                     cd18396"
                     /db_xref="CDD:349704"
     Site            order(32,34..35,71..74,77,79,81..83,85..86,105..110,113,
                     117)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349704"
     Region          161..282
                     /region_name="H1_KCTD8"
                     /note="H1 domain found in potassium channel
                     tetramerization domain-containing protein 8; cd22218"
                     /db_xref="CDD:409029"
     Site            order(168..169,171,175,178,187,189..191,197,199..200,217,
                     226,228..229,236,238..239,241..242,245,251,253..260,272,
                     274,277..278,280)
                     /site_type="other"
                     /note="putative pentamer interface [polypeptide binding]"
                     /db_xref="CDD:409029"
     Site            order(192,214,216..217,220..221,223,229,231,236,271)
                     /site_type="other"
                     /note="putative G protein beta subunit interface
                     [polypeptide binding]"
                     /db_xref="CDD:409029"
     Site            order(251..262,271..273)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:409029"
     CDS             1..434
                     /gene="KCTD8"
                     /coded_by="XM_041459170.1:50..1354"
                     /db_xref="GeneID:121349083"
ORIGIN      
        1 malkeaggsi lpisdmvsgp sgspfpevve lnvggqvyvt rhstllsvpd stlatmfspc
       61 rggpaaarql prdsrarffi drdgflfryv ldylrdkqla lpehfpeker llreaeyfql
      121 gdlvkllspk vtkqsslnde gcqsdledsn sqgssdrlqr aaldkrsgfl tvgyrgsytt
      181 vrdnqadakf rrvarimvcg rialakevfg etlnesrdpd rppekytsrf ylkftyleqa
      241 fdrlseagfh mvacnstgta afinqyrddk iwssyteyif frppqrtisp kqdheerkhd
      301 kvldkgsesg tscnelstss cdshseastp qdnatstqps tahqpntltl drpskkapvq
      361 wmpapdkrrn selfqtlisk sretnlskkk vceklsveee mrkciqdfkk ihipdyfper
      421 krpwqsellq kygl
//
LOCUS       XP_041315114             306 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315114
VERSION     XP_041315114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="BTB/POZ domain-containing protein KCTD8 isoform
                     X2"
                     /calculated_mol_wt=34498
     Region          24..131
                     /region_name="BTB_POZ_KCTD8"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein KCTD8;
                     cd18396"
                     /db_xref="CDD:349704"
     Site            order(32,34..35,71..74,77,79,81..83,85..86,105..110,113,
                     117)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349704"
     Region          161..281
                     /region_name="H1_KCTD8"
                     /note="H1 domain found in potassium channel
                     tetramerization domain-containing protein 8; cd22218"
                     /db_xref="CDD:409029"
     Site            order(168..169,171,175,178,187,189..191,197,199..200,217,
                     226,228..229,236,238..239,241..242,245,251,253..260,272,
                     274,277..278,280)
                     /site_type="other"
                     /note="putative pentamer interface [polypeptide binding]"
                     /db_xref="CDD:409029"
     Site            order(192,214,216..217,220..221,223,229,231,236,271)
                     /site_type="other"
                     /note="putative G protein beta subunit interface
                     [polypeptide binding]"
                     /db_xref="CDD:409029"
     Site            order(251..262,271..273)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:409029"
     CDS             1..306
                     /gene="KCTD8"
                     /coded_by="XM_041459180.1:50..970"
                     /db_xref="GeneID:121349083"
ORIGIN      
        1 malkeaggsi lpisdmvsgp sgspfpevve lnvggqvyvt rhstllsvpd stlatmfspc
       61 rggpaaarql prdsrarffi drdgflfryv ldylrdkqla lpehfpeker llreaeyfql
      121 gdlvkllspk vtkqsslnde gcqsdledsn sqgssdrlqr aaldkrsgfl tvgyrgsytt
      181 vrdnqadakf rrvarimvcg rialakevfg etlnesrdpd rppekytsrf ylkftyleqa
      241 fdrlseagfh mvacnstgta afinqyrddk iwssyteyif fsnalqnhpf ksygynpkfh
      301 lipvlf
//
LOCUS       XP_041315127             522 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-2C adrenergic receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041315127
VERSION     XP_041315127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..522
                     /product="alpha-2C adrenergic receptor"
                     /calculated_mol_wt=57979
     Region          128..508
                     /region_name="7tmA_alpha2C_AR"
                     /note="alpha-2 adrenergic receptors subtype C, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15323"
                     /db_xref="CDD:320446"
     Region          155..181
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320446"
     Region          193..223
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320446"
     Site            order(196,200..201,204..205,273,280,283..284,287,455,
                     458..459,462,479,483,487)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320446"
     Region          235..258
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320446"
     Region          276..305
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320446"
     Region          435..465
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320446"
     Region          476..501
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320446"
     CDS             1..522
                     /gene="ADRA2C"
                     /coded_by="XM_041459193.1:44..1612"
                     /db_xref="GeneID:121349093"
ORIGIN      
        1 mgvdadaaaa sdpapcedpa pagdsrrprg vfsgaegcpe pgmtgraaga sraplpprrg
       61 pggggaaalp apaprtptmd llllvntslg spneslalpp aspsssallp ppspyspaav
      121 aslaavvgfl ivftivgnvl vviavltsra lrapqnlflv slasadilva tlvmpfslan
      181 elmnywyfgk awcniylald vlfctssivh lcaisldryw svtqaveynl krtprrikai
      241 iltvwlisai isfpplisvy rdpegdvfpq cklndetwyi lsscigsffa pclimvlvyi
      301 riyrvaklrt rtlsekrtms egssqtengl sraaggctsl rmqlgenghy svhhwrktse
      361 ledieleess tsesrrrrsr eehrrksksq sfsysysskh sssrlsrasn rsmqffsyrr
      421 rrkrssicrk kvaqarekrf tfvlavvmgv fvvcwfpfff syslygicre acevpetlfk
      481 fffwigycns slnpviytif nqdfrrsfkh ilfkkkkknf rh
//
LOCUS       XP_041315139             238 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydropteridine reductase [Pyrgilauda ruficollis].
ACCESSION   XP_041315139
VERSION     XP_041315139.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459205.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="dihydropteridine reductase"
                     /calculated_mol_wt=24802
     Region          3..225
                     /region_name="DHPR_SDR_c_like"
                     /note="dihydropteridine reductase (DHPR), classical (c)
                     SDRs; cd05334"
                     /db_xref="CDD:187595"
     Site            order(9..10,12..15,34,47,56,79..82,103,107,128..129,143,
                     147,175..178,180,183)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187595"
     Site            order(57,87..90,93..95,97..98,109,113,116,133,135..138,
                     141,144..145,149,152..153,155..157,159..163)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187595"
     Site            order(143,147)
                     /site_type="active"
                     /db_xref="CDD:187595"
     CDS             1..238
                     /gene="QDPR"
                     /coded_by="XM_041459205.1:51..767"
                     /db_xref="GeneID:121349101"
ORIGIN      
        1 maarrvlvyg grgalgsqcv ryfksknwwv asidlaenad asanvvvrat dsfpeqaeqv
       61 taevgkllge ekvdailcva ggwaggsaka kslykncdlm wkqsvwtsti sshlatkhlk
      121 egglltltga qaalsgtpgm iaygmakgav hqlcqslaga ssglpsgsaa vailpvtldt
      181 panrksmpda dfsswtplef iaeifydwit gkdrpssgsl iqvittggkt elvsaahl
//
LOCUS       XP_041315148             466 aa            linear   VRT 06-MAY-2021
DEFINITION  serine protease HTRA3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315148
VERSION     XP_041315148.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459214.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..466
                     /product="serine protease HTRA3"
                     /calculated_mol_wt=49904
     Region          30..81
                     /region_name="IGFBP"
                     /note="Insulin-like growth factor binding protein;
                     pfam00219"
                     /db_xref="CDD:459717"
     Region          93..139
                     /region_name="KAZAL"
                     /note="Kazal type serine protease inhibitors; smart00280"
                     /db_xref="CDD:197624"
     Region          186..463
                     /region_name="DegQ"
                     /note="Periplasmic serine protease, S1-C subfamily,
                     contain C-terminal PDZ domain [Posttranslational
                     modification, protein turnover, chaperones]; COG0265"
                     /db_xref="CDD:440035"
     CDS             1..466
                     /gene="HTRA3"
                     /coded_by="XM_041459214.1:286..1686"
                     /db_xref="GeneID:121349110"
ORIGIN      
        1 mrvsllspll llslsagpha aelqlgrakc parcdvstcp spscpsgyvp drcgcclica
       61 agegdscgrk edppcgdsld crypmgkrfa kgvcqcklsa qvcgsdgrty dnicqlkavs
      121 rkalqhglpa vaqvqkgace sghlqssspr ykfnfiadvv ekiapavvhi elflrhplfg
      181 rnvplssgsg fimsdsgliv tnahvvsstn aisgrqqlkv qlqngdtyea tikdidkksd
      241 iatikihpkk klpvlllghs adlrpgefvv aigspfalqn tvttgivsta qrdgkelglr
      301 dsdmdyiqtd aiinygnsgg plvnldgevi gintlkvtag isfaipsdri tqflteshdk
      361 qskdgkkrfi girmltitpa lveelkhsna dfpdvrsgiy vhevvpnsps hrggiqdgdi
      421 ivkvngrplv tssdlqeavm nesplllevr rgnddllfni epevvm
//
LOCUS       XP_041315160             339 aa            linear   VRT 06-MAY-2021
DEFINITION  G-protein coupled receptor 78 [Pyrgilauda ruficollis].
ACCESSION   XP_041315160
VERSION     XP_041315160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459226.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="G-protein coupled receptor 78"
                     /calculated_mol_wt=38810
     Region          29..305
                     /region_name="7tmA_GPR26_GPR78-like"
                     /note="G protein-coupled receptors 26 and 78, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15219"
                     /db_xref="CDD:320347"
     Region          41..66
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320347"
     Site            order(63,66..67,79..84,86..87,90,135,137..141,169,
                     172..174,176..178,180..181,254,257..258,260..261,264,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320347"
     Region          79..109
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320347"
     Region          121..143
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320347"
     Region          169..198
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320347"
     Region          234..264
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320347"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320347"
     CDS             1..339
                     /gene="GPR78"
                     /coded_by="XM_041459226.1:1..1020"
                     /db_xref="GeneID:121349118"
ORIGIN      
        1 mdlagvllal llvlvlvvsl lsnllvllcf vysteirkqv agvflvnlsf cnllltvlnm
       61 pftllgilrn qqplggcvck avgfletflt sntmlsmaal sidkwiavvf plsytskmry
      121 kdavilmgys wlhsltfplv slfyswvdyn svyasctlhl keeterrrft vftivfhsts
      181 fmlslvilcf tylkvlkvar fhckridiit mqtlvllvdi hpsvkqrcln eqkrrrqrat
      241 kkisifigsf vicfgpyiit rlielipfvt inyywgiisk cltyskaasd pfvysllrqq
      301 ykkvlinivn rilkrdlyps sgynssldte ndyclhrtn
//
LOCUS       XP_041315174            1541 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil and C2 domain-containing protein 2A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041315174
VERSION     XP_041315174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1541
                     /product="coiled-coil and C2 domain-containing protein 2A
                     isoform X1"
                     /calculated_mol_wt=176395
     Region          62..309
                     /region_name="DUF5523"
                     /note="Family of unknown function (DUF5523); pfam17661"
                     /db_xref="CDD:465443"
     Region          566..740
                     /region_name="CC2D2AN-C2"
                     /note="CC2D2A N-terminal C2 domain; pfam15625"
                     /db_xref="CDD:464780"
     Region          1016..>1056
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..1541
                     /gene="CC2D2A"
                     /coded_by="XM_041459240.1:77..4702"
                     /db_xref="GeneID:121349123"
ORIGIN      
        1 maarpsgape tvrelppaps tsrtsfaels vrqrmreklk aartkaeitl sqedpspqpr
       61 rlkgirekkt gvgldktsdd dkfrempege shlpskvkfr dsvkklkqks tfqndfpsee
      121 eaynfftfnf davpekmkae arrknglsee evedecveth edeqeedemd ddvrlvkddd
      181 lfigqtdedl vvekpvdces yteqlkreke flfvpsmlav pasekmprnm qpryledegl
      241 ytgerpivsq snqnilenri lrqdqgkewf gddgkilalp npikqsstrp pifsleegia
      301 peletvyrka tkmtstnqyf vgpgdfqglf qldidisgli fthhpcfsre hvlaaklaql
      361 ydqylarkqk nltklltdkl halrsavhcs megggdgvpv aqqsipeykm eirqtrrlrd
      421 aeqekdrmll ktiikvwkqi kslrdfqkft ntpmklylrk eevdqksdek ayeaeiqaei
      481 kelleecmee yekkmeeykt elhdwkswkk tqkskkkkkk dtrvdeesed hdfgeerikp
      541 ippkmadsle ieqqvrekad ncrrkpgepi lvpeltlsgs itpteqcpra evlrredvkk
      601 rsafikvlfn skevsrtvtr pissdfrvhf gqifnlqiin wpeclklqiy ettgissttl
      661 laevflpvpe tavltgsapl eeiefssdqr vvldhegvgs gvsfsfeadg snrmtfmtsg
      721 kvsssvswaa gekgiplipp vsqqntgips alknidaias igtsgltdmk klakwaaeak
      781 ldpndpnnaa lmqlimiats geahvpdffr leqlqqefnf vsdeefnrsk rfrllqlrne
      841 evaefrnykq vplhereise kifqdyekrv qerdvidskn yldahravva nylqkvresv
      901 inrvliakhh filsdlvnee eipglgilgl glfklaepkr plrprrkerk kvtaqnlsdg
      961 dvkllvniir aydipvrkpv msklqqpsks srsfnemfaa spsaqsppns pdwafnqvlv
     1021 rpfvevsfqr avcrtttaeg pspcwneele lpfrapngdy sthslqtvkd evfinvfdev
     1081 lhdaveddre rgsgihtrie rhwlgcvkip fttiyfqari dgtfkinipp vllgyskeks
     1141 vgmergydsv rnlsegsyit lfitiepqli pgesvrekfd tqedekllqa aekyeaects
     1201 kfpsrqcltt vidldgktvf itryikplnp pqelldavpd rsqtaaelva ryvalipflp
     1261 dsvsfagicd lwstsdqfly llagdeeeha vllcnyflgm gkkawliign aipegptayv
     1321 ltleqsqyvi wnpstgcfyg qydtfcplqn vysliscdni wfnmqeydsp griyfdiskp
     1381 klwkpffsrs lpfpglrsiq peeltyehsd kaaalelqsr iekilkdkim ewrptrptrw
     1441 nryctstlrn flplleqnqg kdveddhqae lqkqlgdyrv sgfpihmpys evrplieavh
     1501 strvhtidvs nvefalavyv haypqnvlsv wiyvaslvrn r
//
LOCUS       XP_041315182            1507 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil and C2 domain-containing protein 2A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041315182
VERSION     XP_041315182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1507
                     /product="coiled-coil and C2 domain-containing protein 2A
                     isoform X2"
                     /calculated_mol_wt=172435
     Region          25..275
                     /region_name="DUF5523"
                     /note="Family of unknown function (DUF5523); pfam17661"
                     /db_xref="CDD:465443"
     Region          532..706
                     /region_name="CC2D2AN-C2"
                     /note="CC2D2A N-terminal C2 domain; pfam15625"
                     /db_xref="CDD:464780"
     Region          982..>1022
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..1507
                     /gene="CC2D2A"
                     /coded_by="XM_041459248.1:77..4600"
                     /db_xref="GeneID:121349123"
ORIGIN      
        1 maarpsgape tvrelppaps tsrtsfaels vrqrmreklk aartkaeitl sqedpspqpr
       61 rlkgirekkt gvgldktfqn dfpseeeayn fftfnfdavp ekmkaearrk nglseeeved
      121 ecvethedeq eedemdddvr lvkdddlfig qtdedlvvek pvdcesyteq lkrekeflfv
      181 psmlavpase kmprnmqpry ledeglytge rpivsqsnqn ilenrilrqd qgkewfgddg
      241 kilalpnpik qsstrppifs leegiapele tvyrkatkmt stnqyfvgpg dfqglfqldi
      301 disglifthh pcfsrehvla aklaqlydqy larkqknltk lltdklhalr savhcsmegg
      361 gdgvpvaqqs ipeykmeirq trrlrdaeqe kdrmllktii kvwkqikslr dfqkftntpm
      421 klylrkeevd qksdekayea eiqaeikell eecmeeyekk meeyktelhd wkswkktqks
      481 kkkkkkdtrv deesedhdfg eerikpippk madsleieqq vrekadncrr kpgepilvpe
      541 ltlsgsitpt eqcpraevlr redvkkrsaf ikvlfnskev srtvtrpiss dfrvhfgqif
      601 nlqiinwpec lklqiyettg issttllaev flpvpetavl tgsapleeie fssdqrvvld
      661 hegvgsgvsf sfeadgsnrm tfmtsgkvss svswaagekg iplippvsqq ntgipsalkn
      721 idaiasigts gltdmkklak waaeakldpn dpnnaalmql imiatsgeah vpdffrleql
      781 qqefnfvsde efnrskrfrl lqlrneevae frnykqvplh ereisekifq dyekrvqerd
      841 vidsknylda hravvanylq kvresvinrv liakhhfils dlvneeeipg lgilglglfk
      901 laepkrplrp rrkerkkvta qnlsdgdvkl lvniiraydi pvrkpvmskl qqpskssrsf
      961 nemfaaspsa qsppnspdwa fnqvlvrpfv evsfqravcr tttaegpspc wneelelpfr
     1021 apngdysths lqtvkdevfi nvfdevlhda veddrergsg ihtrierhwl gcvkipftti
     1081 yfqaridgtf kinippvllg yskeksvgme rgydsvrnls egsyitlfit iepqlipges
     1141 vrekfdtqed ekllqaaeky eaectskfps rqclttvidl dgktvfitry ikplnppqel
     1201 ldavpdrsqt aaelvaryva lipflpdsvs fagicdlwst sdqflyllag deeehavllc
     1261 nyflgmgkka wliignaipe gptayvltle qsqyviwnps tgcfygqydt fcplqnvysl
     1321 iscdniwfnm qeydspgriy fdiskpklwk pffsrslpfp glrsiqpeel tyehsdkaaa
     1381 lelqsrieki lkdkimewrp trptrwnryc tstlrnflpl leqnqgkdve ddhqaelqkq
     1441 lgdyrvsgfp ihmpysevrp lieavhstrv htidvsnvef alavyvhayp qnvlsvwiyv
     1501 aslvrnr
//
LOCUS       XP_041315195             707 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/LRR-repeat protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041315195
VERSION     XP_041315195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="F-box/LRR-repeat protein 5"
                     /calculated_mol_wt=80203
     Region          25..178
                     /region_name="Hr_FBXL5"
                     /note="Hemerythrin-like domain of FBXL5-like proteins;
                     cd12109"
                     /db_xref="CDD:213984"
     Region          222..262
                     /region_name="F-box_FBXL5"
                     /note="F-box domain found in F-box/LRR-repeat protein 5
                     (FBXL5) and similar proteins; cd22118"
                     /db_xref="CDD:438890"
     Site            order(225,229,232..233,236..237,241,243..244,248..250,252)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438890"
     Region          349..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <357..>421
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          375..401
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          399..422
                     /region_name="LRR_CC"
                     /note="Leucine-rich repeat - CC (cysteine-containing)
                     subfamily; smart00367"
                     /db_xref="CDD:197685"
     Region          402..442
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          448..535
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          536..588
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <616..695
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          616..643
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          644..669
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..707
                     /gene="FBXL5"
                     /coded_by="XM_041459261.1:19..2142"
                     /db_xref="GeneID:121349135"
ORIGIN      
        1 mlappfappg aarlhgenma pfpeevdvfs aphwrmkqlv glycdklskt nfsnnndfra
       61 llqslyatfk efkmheqien eciigllqqr srtvynvhsd nklsemlslf ekglknvkne
      121 yeqlnyakql kerleaftrd flphmkeeee vfqpmlmeyf tyeelkdikk kviaqhcsqk
      181 eaaefrglsk wnqaeelqkv fkysvdekad qetevtghtt nitnlppevm vtifsylnpq
      241 elcqcsqvst ewsqlaktgs lwkhlypvrw argdwysgpa adtetepdee wvknrkdesr
      301 afqewdedad ideseeaaed slainiaqme krllhglihh vlplvgssvk tlvlayssav
      361 sskmvrqile lcpnleyldl tqtdisdsvf eswcsvgycq nlrhldlsgc ekitdvaier
      421 istalgiist hhsrgilksc rnrntktlwk nreitlqpsq kynglheisn enliqggnge
      481 rhwtkpdgse nfssayvwml daddladied aaewrhrnve gfclmeptsh incsalcynr
      541 diyglrtrgw qqhcastdli ycghsfccag talrtiralp essalcrkpi rtkqsekkds
      601 aysgsektee etarvlqfls lsgcyqitdr alraltlggg lphlehlnls gcltvtgagl
      661 qelvsacpsl kdehfyycdn ingphaetas gcqnlqcgfr accrsge
//
LOCUS       XP_041315217             171 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041315217
VERSION     XP_041315217.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459283.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..171
                     /product="exocyst complex component 1-like"
                     /calculated_mol_wt=20194
     Region          2..118
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..171
                     /gene="EXOC1L"
                     /coded_by="XM_041459283.1:133..648"
                     /db_xref="GeneID:121349147"
ORIGIN      
        1 msslvkedle krlfgprrqr lhefievega gaqryylcaa vtkskeveic mvkhwrvdre
       61 ekyeivekwf lkdlemidgk eadadnpyfd mhfhkvynme ayscaskytf artlnklnam
      121 ylkkdfkivn fddtylndds iwsssnrdfl vvmrvcfyas nllclslcrl s
//
LOCUS       XP_041315233            1742 aa            linear   VRT 06-MAY-2021
DEFINITION  NACHT and WD repeat domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315233
VERSION     XP_041315233.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459299.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1742
                     /product="NACHT and WD repeat domain-containing protein 2"
                     /calculated_mol_wt=197823
     Region          412..>523
                     /region_name="CDC6"
                     /note="Cdc6-related protein, AAA superfamily ATPase
                     [Replication, recombination and repair]; COG1474"
                     /db_xref="CDD:441083"
     Region          970..1307
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1013..1051
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1104..1141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1149..1188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1238..1275
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1250..1583
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1280..1316
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1323..1358
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1364..1399
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1403..1429
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1742
                     /gene="NWD2"
                     /coded_by="XM_041459299.1:173..5401"
                     /db_xref="GeneID:121349148"
ORIGIN      
        1 mwpagaggrl pcprdaalrr aafsgnlsal pshlvpsgrs vrvfisanpe dtiaerralr
       61 ehvypklref crenyglefq vidlywgvea dewdspelqk trmklledcl kssagpcfvg
      121 llgekygnir ipgevdsaef emildaaiea kletrileew ycrdenavpp ayylrpksem
      181 lknyqntmes ssnsmnenkw qdiseeikki fktavkllye kgkmkhsqak rylssaiede
      241 ldfalgkqtp aflkkcvcyi rkianierfv kipemgkymd vvhkagkflr dpeaheklik
      301 lrdefiptiv assnlrvyts vthcdmklgy sqeveshyie glgkqfyedm idiiqatvqq
      361 nfdtetdmly devlqhsslc ktystfyeyr cealnivhky vlprkighin pliiyggpct
      421 gktlllaeaa kkayswlqee mgpdsdpvvv irflgstets tdlknilqsi ceqlavnyrc
      481 lvqsypkkih dlrdlfinll nessfhrplv iifdaleqlt dsddgrklww lpihlprsvr
      541 iilstlpnkh gilqklrcli heesnyielt ardrkmcsqv lkhqllrvkr kvtsgqqiyv
      601 neafskctlp mfvnltfrev rhwrshkdvd esslcvtvhe sieqlfwsle nkcgsrllsr
      661 algyitmsks glsemeledi laldnsvmye lnervresnp lripyiyiar lkeglqgyli
      721 erqvknvtll lwanrhlqli aqklylhnee dlremhtvma eyflgvwsgg rrkpfysndq
      781 ylsgcpdras ramnedekhc vdqaafdrqa pdqpwvfqcn plepdiffin hrkmtelihh
      841 ltrcgrtddl lygvimnfsw lytmirigqf dkalsdiela ytysqekelk flastlrsik
      901 fkvvkypgsl saelqqrllp vvsslpklrh lllecdkdgp kycsivplhs smdvtysper
      961 lplssscmhv teilptfnps tiiaalengs istwdvetrq llrqittaps vilgmklssd
     1021 ekylvvattn ntllvydnin scllseveik gskhcgiagd ssfingftls vnhalawlea
     1081 skdvtvidll ygwplyhfhc wyevtcvqcs pdgiyafcgq ylntatifhl gsgeklttvt
     1141 sefssgfvkf llildtaqem vmvdsegsls vwnteeiakp qltddfdcrr edsevvsiel
     1201 sedqsailic kalsielldt rvwkvaekfr akhnerfisa vlskngncii asmentsaif
     1261 vwrrdtgqcm aslqeisgti vrliksnhhn mllslstsgv lsiwdidiit amsnidksgk
     1321 pirrlvlpar geliytldgs dsvhkwnfst gfieavfkhe givencvlts sgeimvtsdd
     1381 kcsqyvwhtv sgenifring qkiselmith ndqfvvslce qnasrvwrla tghrvcnilv
     1441 alqnafitta ntfvvgmakn kvlavslwtg sitkkfccdd gasivdikli pdcpdiivfi
     1501 tstesvniws lteevicrrv qlptnflkkl edfeispngk lgiitrgden invldlhsgk
     1561 lrvvhapgvi wrqrlsrdgr ylvyiccrge edddngavss livmrladgk nigacslykt
     1621 ptflalsqrh lniiigfddg sigtytvvdr vdaalkikia tsnsrqifnn atqvirpkch
     1681 nysfkvtadc iwrestevfa rdspitvtea evseatptkr hsycyekvcs aidcrhsfas
     1741 dn
//
LOCUS       XP_041315246             289 aa            linear   VRT 06-MAY-2021
DEFINITION  complement C1q tumor necrosis factor-related protein 7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315246
VERSION     XP_041315246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="complement C1q tumor necrosis factor-related
                     protein 7"
                     /calculated_mol_wt=30614
     Region          <56..>137
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          149..273
                     /region_name="C1q"
                     /note="C1q domain; pfam00386"
                     /db_xref="CDD:395310"
     CDS             1..289
                     /gene="C1QTNF7"
                     /coded_by="XM_041459312.1:592..1461"
                     /db_xref="GeneID:121349151"
ORIGIN      
        1 mfvllyitsf aiytseqplq sqtkgenyyt ryicsipglp gpagppgasg spgphgrigl
       61 pgrdgrdgrk gekgekgsag lrgktgplgp agekgdqgqs gkkgpegltg akgevgpagp
      121 pgpkgdkger gepgvpgvck cgkivlksaf svgittsype erlpivfnkv lfnegehynp
      181 stgkficaip giyyfsydit lankhlaigl vhngkyrikt fdantgnhdv asgstviylq
      241 pedevwleif ysdqnglfsd ptwadslfsg fllyvdtdyl dalsdedel
//
LOCUS       XP_041315250             289 aa            linear   VRT 06-MAY-2021
DEFINITION  complement C1q tumor necrosis factor-related protein 7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315250
VERSION     XP_041315250.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459316.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="complement C1q tumor necrosis factor-related
                     protein 7"
                     /calculated_mol_wt=30614
     Region          <56..>137
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          149..273
                     /region_name="C1q"
                     /note="C1q domain; pfam00386"
                     /db_xref="CDD:395310"
     CDS             1..289
                     /gene="C1QTNF7"
                     /coded_by="XM_041459316.1:282..1151"
                     /db_xref="GeneID:121349151"
ORIGIN      
        1 mfvllyitsf aiytseqplq sqtkgenyyt ryicsipglp gpagppgasg spgphgrigl
       61 pgrdgrdgrk gekgekgsag lrgktgplgp agekgdqgqs gkkgpegltg akgevgpagp
      121 pgpkgdkger gepgvpgvck cgkivlksaf svgittsype erlpivfnkv lfnegehynp
      181 stgkficaip giyyfsydit lankhlaigl vhngkyrikt fdantgnhdv asgstviylq
      241 pedevwleif ysdqnglfsd ptwadslfsg fllyvdtdyl dalsdedel
//
LOCUS       XP_041315261             176 aa            linear   VRT 06-MAY-2021
DEFINITION  COMM domain-containing protein 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041315261
VERSION     XP_041315261.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459327.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..176
                     /product="COMM domain-containing protein 8"
                     /calculated_mol_wt=19949
     Region          2..175
                     /region_name="Commd8"
                     /note="COMM_Domain containing protein 8. The COMM Domain
                     is found at the C-terminus of a variety of proteins;
                     presumably all COMM_Domain containing proteins are located
                     in the nucleus and the COMM domain plays a role in
                     protein-protein interactions. Several...; cd04756"
                     /db_xref="CDD:240104"
     CDS             1..176
                     /gene="COMMD8"
                     /coded_by="XM_041459327.1:40..570"
                     /db_xref="GeneID:121349160"
ORIGIN      
        1 mprlleklpp graleflhkv vdgvcgrayp ryqdygnvws lsewmevlee tmtyfktavg
       61 knmsdeeaaq qiielnsdfq eaitkclkgr keeirnalve svhaissaql qdfdwqlkla
      121 lssdkismlq mpllnldldv rengevkpis iemnkeelqn linaleaank vvlqlk
//
LOCUS       XP_041315275             765 aa            linear   VRT 06-MAY-2021
DEFINITION  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
            [Pyrgilauda ruficollis].
ACCESSION   XP_041315275
VERSION     XP_041315275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..765
                     /product="pre-mRNA-splicing factor ATP-dependent RNA
                     helicase DHX15"
                     /calculated_mol_wt=87944
     Region          106..>733
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..765
                     /gene="DHX15"
                     /coded_by="XM_041459341.1:126..2423"
                     /db_xref="GeneID:121349164"
ORIGIN      
        1 mskrhrldlg ddyssskkrt tdgkdrdrdr drddrskdrd rdrdrdrdrd rerdkekdlr
       61 ptsnstyyas aglpaikpam iphsinpftn lphtpryydi lkkrlqlpvw eykerftdil
      121 irhqsfvlvg etgsgkttqi pqwcvdymrs lpgpkrgvac tqprrvaams vaqrvademd
      181 vmlgqevgys irfedcssak tilkymtdgm llreamndpl lerygviild eahertlatd
      241 ilmgvlkevv rqrsdlkviv msatldagkf qiyfdncpll tipgrthpve ifytpeperd
      301 yleaairtvi qihmceeeeg dlllfltgqe eideackrik reiddlgpev gdikiiplys
      361 tlppqqqqri feppppkkqn gaigrkvvvs tniaetslti dgvvfvidpg fakqkvynpr
      421 irvesllvta iskasaqqra gragrtrpgk cfrlytekay ktemqdntyp eilrsnlgsv
      481 vlqlkklgid dlvhfdfmdp papetlmral ellnylaaln ddgdltelgs mmaefpldpq
      541 lakmviascd yncsnevlsi tamlsvpqcf vrpteakkaa deakmrfahi dgdhltllnv
      601 yhafkqnhes vqwcydnfin yrslmsadnv rqqlsrimdr fnlprrstdf tsrdyyinir
      661 kalvtgyfmq vahlertghy ltvkdnqvvq lhpstvldhk pewvlynefv lttknyirtc
      721 tdikpewlvk iapqyydmsn fpqceakrql driiaklqsk eysqy
//
LOCUS       XP_041315290            1018 aa            linear   VRT 06-MAY-2021
DEFINITION  VPS10 domain-containing receptor SorCS2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315290
VERSION     XP_041315290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459356.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1018
                     /product="VPS10 domain-containing receptor SorCS2"
                     /calculated_mol_wt=114702
     Region          1..604
                     /region_name="VPS10"
                     /note="VPS10 domain; smart00602"
                     /db_xref="CDD:214740"
     Region          <617..>740
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          <637..697
                     /region_name="PKD_4"
                     /note="PKD domain; pfam18911"
                     /db_xref="CDD:436824"
     CDS             1..1018
                     /gene="SORCS2"
                     /coded_by="XM_041459356.1:5..3061"
                     /db_xref="GeneID:121349168"
ORIGIN      
        1 mgkvlesslw rssdfgtlyt klnlqpgiat vidnfyicst nkkkiilvss shndrdqslf
       61 istdegatfq kqpiaffvet llfhpkeedk vlaytkegki yvsidlgkkw nllqegvskd
      121 hffwavagvd gdldlvhmei qdpsggyryi tcqiqncsdk tmtvpfagst drdsltvqdd
      181 yiflqttsan rtkyyvsyrr ngfvqmklpk yalpkdlqii stdenqvfva vqewyqtdty
      241 nlyqsdpqgv yysillenvr stkqpeenvl idilevrgvk gvflanqkid gkvttlityn
      301 kgrdwdflnp pdidmngkpt nckppdcylh lhlrwadnpy vsgtvhtkdt apglimgagn
      361 lgsqlveyke emyitsdcgn twrqvfeeeh hilyldhggv ivaikdtsip lkilkfside
      421 gqtwsthnft stsvfvdgll sepgdetlvm tvfghisyrs dwelvkvdfr psfprectde
      481 dyesweltnl qgdrcimgqq rsfrkrkiss wcikgksfts altskvcecv ntdflcdygf
      541 ersaplkles skcfadfwfn peappedcvl gqaytsstgy rkvvsnvceg gvdlqqnlah
      601 hmcpliapkg lqisireesl avrpgeditf ivqqeqgdvl stkyqvdlgd gfkaiyvnlt
      661 mtgepirhry enpgiyrvsv kaenvaghde avvfvqvnsp lqalnlevvp vigrnqevnl
      721 taiilpknpn ltvfywwign nlqplltles flvtkfaetg dvrvtvqvsc gssmlqdskv
      781 vhvfdyfhvl plkftkdldk ynpdipewre digrvvtrll aketsipeet lmtvvkpglp
      841 taadlhvllp anqpkkkrsi tsdkriaaik qalnahnisf flrggywvlv tladsdsdsq
      901 rigggsgywa ivvlfvvclv avgafilykf krklpgrnvy aqmhnekeqe mtspvnhsed
      961 tqniiqgeef idddldsqtl gnarvtpsgr sgnlnsyrvp lllmpvsvqs qaitqawf
//
LOCUS       XP_041315306            1425 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase VD [Pyrgilauda ruficollis].
ACCESSION   XP_041315306
VERSION     XP_041315306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1425
                     /product="phospholipid-transporting ATPase VD"
                     /calculated_mol_wt=160885
     Region          65..1207
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(430..432,765,789..791,866,913..915,1023,1026,1029,
                     1049,1052)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1425
                     /gene="ATP10D"
                     /coded_by="XM_041459372.1:1..4278"
                     /db_xref="GeneID:121349170"
ORIGIN      
        1 madpirwary rwqrlisteg recssnnsss kyyqpskttg khrivipclg hfkeeyekvs
       61 klymnnkirt trytllnflp rnlfeqfhri anlyflflvv lnwvplveaf qkeitmlpli
      121 gvltiiavkd gledysrykm dkqinnlvtk vysrkekkyi decwknvnvg dfvrlsrnei
      181 ipadmvllys sdpdgicyie tagldgetnl kqrqvvrgys eqvseidpee fssriecesp
      241 nndlgrfrgf vehsnmdrvg lskenlllrg ctvrnteavv givvyaghet kamlnnsgph
      301 ykrsklerkv ntdilwcvll lllmcltgav ghgiwlsrys eipffniprp dgkssppala
      361 gfymfwtmii llqvlipvsl yvsieivklg qiyliqndid fyhektdsti qcralniaed
      421 lgqiqyifsd ktgtltenkm vfrrcsiagq eysheenakr lesyqemdse dedsadcqcg
      481 sstptsecqg hncravcepl ngkslnqlsg sysafkrqde aggipnsghm afsspietdv
      541 vpdtqllekf sqisfhsyqq seeasskfsl etmyiidffl alaicntvvv sgpsqtrqkv
      601 rrpcfcrmpi ksleeirqmf qrfsvwrlss splpsvkess sespnsfvrk lsifrqklas
      661 paldgdaqri sephntdspe nsqvpgelhl vkvaaggepn cavpsielsp ipklcyeaes
      721 pdeaalvhaa raykcvlqsr tpdqvtvdfa glgsltfqll hilpfdslrk rmsvvvrhpv
      781 snkvvvytkg adsvmmdllr tasevhtnns eieekikert qqhlddyarr glrtlciakk
      841 vmsdaeyaew lnhrflaets idnredllle samrletklt llgatgiedr lqegvpdtiq
      901 alrkagikiw mltgdkreta vniayackll epedriftlk sqtrdacalv mskilkdlqk
      961 nasvkknyse klgnvsasps tqpqgfnsgl vidgrtlehv lhdslqnifl eltekcravv
     1021 ccqatplqks vlvklvrskl kamtlavgdg andvsmiqaa dtgvgisgqe gmqavmasdf
     1081 aisqfrhlrk lllvhghwcy trltnmvlyf fyknvtyvnl lfwyqffcgf sgtsmtdywi
     1141 lilfnllfts vppiiygvld kdvsaeilme lpqlytmsqk svaylpsafw itlldafyqs
     1201 licffvpyft ycgsdidifs fgnpintaal fimlfhllie cksvtwvhtv vivgsilfyf
     1261 vftlaigatc kthnprpdfy wimekhmadp vfylvclltt ciallpryli rvlqgtlfps
     1321 pvlrakylvr lspeeqrkei krwkdecnvn ysvelqptsv psssaagavs eekstdsglp
     1381 asktpfqtcs rdglvkntsf lpdiqdesgs tsglnsekte flkgn
//
LOCUS       XP_041315318             195 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor-binding protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315318
VERSION     XP_041315318.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459384.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..195
                     /product="fibroblast growth factor-binding protein 2"
                     /calculated_mol_wt=21651
     Region          5..195
                     /region_name="FGF-BP1"
                     /note="FGF binding protein 1 (FGF-BP1); pfam06473"
                     /db_xref="CDD:461927"
     CDS             1..195
                     /gene="FGFBP2"
                     /coded_by="XM_041459384.1:1..588"
                     /db_xref="GeneID:121349177"
ORIGIN      
        1 mkssallfli vicgmgglgq klkpkkrsng eeikfrtktk dvctitmsgd deemklriec
       61 ksqglsywce ftgkpsvcra frnnpkiywn qiaaelrkip hacesmevlk ttmcqkappe
      121 almrqiaagv epedldqeks vqkasipmge agqnsdltqh gqvsenetea mklarehcwe
      181 slhgvcsyii gilrg
//
LOCUS       XP_041315328             502 aa            linear   VRT 06-MAY-2021
DEFINITION  rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315328
VERSION     XP_041315328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="rRNA N6-adenosine-methyltransferase ZCCHC4
                     isoform X1"
                     /calculated_mol_wt=58022
     Region          27..70
                     /region_name="zf-GRF"
                     /note="GRF zinc finger; cl46396"
                     /db_xref="CDD:480736"
     Region          157..286
                     /region_name="N6-adenineMlase"
                     /note="Probable N6-adenine methyltransferase; pfam10237"
                     /db_xref="CDD:463014"
     CDS             1..502
                     /gene="ZCCHC4"
                     /coded_by="XM_041459394.1:8..1516"
                     /db_xref="GeneID:121349185"
ORIGIN      
        1 maaagperer pgpaalallg aapgapscph gpallfvkts qgkeegrrfy acsacrdrkd
       61 csffqwedek vsetrlaare eynrshqpcf thrqnvdryk nfvllplskr rfcqecqqll
      121 lpaewekhsd hqflcditta qlkspsqlly plenkktnaq ylfadrscqf llnllkdlgf
      181 rrvlsvgtpr lheviqskas qeeefnvrsl lldidfrysq fytedefchy nmfnhhffgg
      241 eaaretcrkf lceengervi mvtdppfggl vealassfkk lmamwsetek evfslldhdn
      301 rempmfwifp yffesrildf fpsfsmmdyq vdydnhalyk hgktgrrqsp vriftnltpn
      361 mivlpeeegy rfctvcqryv ssgnqhceic nsctskdgrr wkhcvlckkc vkpswfhcnn
      421 cncctlqkhs cektdagcfv cgkaghkrsa cpslsrsraa cqpdkkkgqk trkrikmgic
      481 krlamkhaif skrkvknkkk kt
//
LOCUS       XP_041315336             497 aa            linear   VRT 06-MAY-2021
DEFINITION  rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315336
VERSION     XP_041315336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="rRNA N6-adenosine-methyltransferase ZCCHC4
                     isoform X2"
                     /calculated_mol_wt=57462
     Region          27..70
                     /region_name="zf-GRF"
                     /note="GRF zinc finger; cl46396"
                     /db_xref="CDD:480736"
     Region          157..286
                     /region_name="N6-adenineMlase"
                     /note="Probable N6-adenine methyltransferase; pfam10237"
                     /db_xref="CDD:463014"
     CDS             1..497
                     /gene="ZCCHC4"
                     /coded_by="XM_041459402.1:8..1501"
                     /db_xref="GeneID:121349185"
ORIGIN      
        1 maaagperer pgpaalallg aapgapscph gpallfvkts qgkeegrrfy acsacrdrkd
       61 csffqwedek vsetrlaare eynrshqpcf thrqnvdryk nfvllplskr rfcqecqqll
      121 lpaewekhsd hqflcditta qlkspsqlly plenkktnaq ylfadrscqf llnllkdlgf
      181 rrvlsvgtpr lheviqskas qeeefnvrsl lldidfrysq fytedefchy nmfnhhffgg
      241 eaaretcrkf lceengervi mvtdppfggl vealassfkk lmamwsetek edhdnrempm
      301 fwifpyffes rildffpsfs mmdyqvdydn halykhgktg rrqspvrift nltpnmivlp
      361 eeegyrfctv cqryvssgnq hceicnscts kdgrrwkhcv lckkcvkpsw fhcnncncct
      421 lqkhscektd agcfvcgkag hkrsacpsls rsraacqpdk kkgqktrkri kmgickrlam
      481 khaifskrkv knkkkkt
//
LOCUS       XP_041315346             546 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 domain-binding protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041315346
VERSION     XP_041315346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..546
                     /product="SH3 domain-binding protein 2 isoform X1"
                     /calculated_mol_wt=60909
     Region          57..171
                     /region_name="PH_3BP2"
                     /note="SH3 domain-binding protein 2 Pleckstrin homology
                     (PH) domain; cd13308"
                     /db_xref="CDD:270118"
     Region          441..541
                     /region_name="SH2_SH3BP2"
                     /note="Src homology 2 domain found in c-Abl SH3
                     domain-binding protein-2 (SH3BP2); cd10359"
                     /db_xref="CDD:198222"
     Site            order(449,473,495,497)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198222"
     Site            order(496,523)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198222"
     CDS             1..546
                     /gene="SH3BP2"
                     /coded_by="XM_041459412.1:100..1740"
                     /db_xref="GeneID:121349197"
ORIGIN      
        1 mperghkllm alssqrkqsf getvcrntmc rsdkvtrmma sqeqvwpvpm kaigaqnllt
       61 mpggvtksgy lhkkggtqlq ilkwplrfvi ihegciyyfk sstsaspqga fslkgynrvm
      121 raaeettssn vfpfklvhis kkhrtwffsa ssederknwm lslrreighy hekketitef
      181 sdsgsdadsf ygsverpidi kyshhsadne dydqeeedes ylqpdtsdiv kddmvlppay
      241 ppppvphvrk spysearahs ysgkptapvp ppppkrslpe iklepppvpp lpvfkkpasg
      301 keshplppep vppaqalapp eaceklksln lsprtppplp gnkpklsqla eklaepkvpr
      361 epgkpglfvp pvlpkppvss hqppaakprt ekslcpqlqr sppdgqsfrs fsfekpalps
      421 kpsqpdddsd ddyekvglpv siflntsesf everifkass pqgqpqngly cirnssskpg
      481 kvlvvwdepa gkvrnyrife kdgkfyldsd ilflnmgslv eyysthvlps hdslilrcpy
      541 gyskpr
//
LOCUS       XP_041315354             509 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 domain-binding protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315354
VERSION     XP_041315354.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459420.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="SH3 domain-binding protein 2 isoform X2"
                     /calculated_mol_wt=56644
     Region          20..134
                     /region_name="PH_3BP2"
                     /note="SH3 domain-binding protein 2 Pleckstrin homology
                     (PH) domain; cd13308"
                     /db_xref="CDD:270118"
     Region          404..504
                     /region_name="SH2_SH3BP2"
                     /note="Src homology 2 domain found in c-Abl SH3
                     domain-binding protein-2 (SH3BP2); cd10359"
                     /db_xref="CDD:198222"
     Site            order(412,436,458,460)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198222"
     Site            order(459,486)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198222"
     CDS             1..509
                     /gene="SH3BP2"
                     /coded_by="XM_041459420.1:234..1763"
                     /db_xref="GeneID:121349197"
ORIGIN      
        1 mmasqeqvwp vpmkaigaqn lltmpggvtk sgylhkkggt qlqilkwplr fviihegciy
       61 yfksstsasp qgafslkgyn rvmraaeett ssnvfpfklv hiskkhrtwf fsassederk
      121 nwmlslrrei ghyhekketi tefsdsgsda dsfygsverp idikyshhsa dnedydqeee
      181 desylqpdts divkddmvlp payppppvph vrkspysear ahsysgkpta pvpppppkrs
      241 lpeikleppp vpplpvfkkp asgkeshplp pepvppaqal appeaceklk slnlsprtpp
      301 plpgnkpkls qlaeklaepk vprepgkpgl fvppvlpkpp vsshqppaak prtekslcpq
      361 lqrsppdgqs frsfsfekpa lpskpsqpdd dsdddyekvg lpvsiflnts esfeverifk
      421 asspqgqpqn glycirnsss kpgkvlvvwd epagkvrnyr ifekdgkfyl dsdilflnmg
      481 slveyysthv lpshdslilr cpygyskpr
//
LOCUS       XP_041315364             593 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 47 [Pyrgilauda ruficollis].
ACCESSION   XP_041315364
VERSION     XP_041315364.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459430.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..593
                     /product="RNA-binding protein 47"
                     /calculated_mol_wt=64384
     Region          20..593
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     CDS             1..593
                     /gene="RBM47"
                     /coded_by="XM_041459430.1:233..2014"
                     /db_xref="GeneID:121349213"
ORIGIN      
        1 mtaedstarm sndstnvatt kvpegvagap netallalma rtgysmiqen gqrkyggppp
       61 gweglhpprg cevfvgkipr dvyedelvpv fesvgriyem rlmmdfdgkn rgyafvmytq
      121 kheakravre lnnyeirpgr llgvccsvdn crlfiggipk mkkreeilee iakvtegvld
      181 vivyasaadk mknrgfafve yeshraaama rrklmpgriq lwghqiavdw aepeidvded
      241 vmetvkilyv rnlmietted tikkvfgqfn pgcvervkki rdyafvhftt redaihamnn
      301 lngvelegsc levtlakpvd keqytryqka akggaaatse vtqqpnyvys cdpytlayyg
      361 ypynaligpn rdyfvkgsir grgrgaagsr apgprgsylg gysagrgiys ryhegkgkqq
      421 ekgfelvpnl elpavnpvai kpgavaipai gaqysmfqaa ppakmmedgk ihtvehiinp
      481 iavqqdpasa aaaaaaaaaa vipavstppp fqgrpitpvy tmtpnvqrip aagiygtsyv
      541 pfaapaaata tiatlqknaa aaaaayggya gyippafpaa tiqvpihdvy qty
//
LOCUS       XP_041315376            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  centrosomal protein of 135 kDa [Pyrgilauda ruficollis].
ACCESSION   XP_041315376
VERSION     XP_041315376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459442.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="centrosomal protein of 135 kDa"
                     /calculated_mol_wt=133494
     Region          77..920
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <860..>1100
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1150
                     /gene="CEP135"
                     /coded_by="XM_041459442.1:149..3601"
                     /db_xref="GeneID:121349223"
ORIGIN      
        1 msanaerrfv nlrkrlnqlg yrhplgvdsl plveklfsdl vhtteslrka kfssgkteke
       61 csnydtilep yktenarltr enndlhleil klkeqsdrhv kdlkaslrrv ehettdlkfl
      121 nnqyihkikv leketkakte kiqqlqeknl qavvqtpggr rksipfrrqh mqidqlvpps
      181 gvsaypvpqp qdpyiadllq vadnriqelq sevtelqekl etsesgmkny skqveirdke
      241 ierlmlaldg grshevlsle srtksnekli shlniqvdyl qkknkelenh iqdlldtkqn
      301 vtsevvdlsn knqelcqeln eidhlaqqle rhkeivleta dkeigeakke ierkvseiqd
      361 lqetitrlks elcschkene rlneklsgkt dekgnlelll nqlqqekqrl tektenlerk
      421 erelvleier mrldygialg dkspsrldaf vktleddrdy ykraldylqk mvklkpspsr
      481 rtaekseelk sitrerdelr svldrfekhm ieiqsnvkll taerdrlkil yeqsqselnr
      541 mrreakhsfv sqshieeerd ialtdfrilm aekeslgekl kmhqeaayhe ksklqhdise
      601 lenniqglqi ekcelrttvs ilkerinyle nelnlksskl aqasddssqf kaeicslqll
      661 ndqhqksied lqhrlslkkd elltaqdeii klkeiidrln qrstsqeeav svlrstisvl
      721 dkekdslqet vdekteriac lddnlanrek tiahlrltls elesstdqmq drlsnrdrei
      781 aslhhqldtt qlelaemgrv kdmalkenrr lqddlatmar enqavstele damrereemk
      841 trvhsyitev srfesliask ekenqellek frmlhtqaeg wemkahqaeg esssirlell
      901 svdtdrrhlr erveflekei qghivahqvy esqissitkn msrleedlkr enqdkasvla
      961 dlasvrelcv kleankella rqltsksmdy ervlgeledt ksegellkkq lsserltvqn
     1021 letllatsrd kefqnqlttq dkdteiqllk dkltlaeskl ssnnrelsml rskvaqmqad
     1081 tdvlkrkltt erfereraiq emrrhglcas slraspplss tlrspshspe rsaarateqa
     1141 aaeknvtvke
//
LOCUS       XP_041315398             140 aa            linear   VRT 06-MAY-2021
DEFINITION  protein atonal homolog 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041315398
VERSION     XP_041315398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..140
                     /product="protein atonal homolog 8"
                     /calculated_mol_wt=14880
     Region          43..110
                     /region_name="bHLH_TS_ATOH8"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     protein atonal homolog 8 (ATOH8) and similar proteins;
                     cd11421"
                     /db_xref="CDD:381427"
     Site            order(51,55,57..59,61,66,84..87)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381427"
     Site            order(64..65,68..69,71..72,88,91,95,97..98,102,104..105)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381427"
     CDS             1..140
                     /gene="ATOH8"
                     /coded_by="XM_041459464.1:184..606"
                     /db_xref="GeneID:121349234"
ORIGIN      
        1 mggsgaaaaa aasgaaqrrs appppaaspr prpgeasgvs peikalqqtr rllanarert
       61 rvhtisaafe alrkqvpcys ygqklsklai lriacnyils larladldys adhsnmsfse
      121 cveqctrtlq aegrskkrke
//
LOCUS       XP_041315413             615 aa            linear   VRT 06-MAY-2021
DEFINITION  HAUS augmin-like complex subunit 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315413
VERSION     XP_041315413.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459479.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..615
                     /product="HAUS augmin-like complex subunit 3"
                     /calculated_mol_wt=69812
     Region          29..285
                     /region_name="HAUS-augmin3"
                     /note="HAUS augmin-like complex subunit 3; pfam14932"
                     /db_xref="CDD:464384"
     Region          276..>506
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..615
                     /gene="HAUS3"
                     /coded_by="XM_041459479.1:1509..3356"
                     /db_xref="GeneID:121349236"
ORIGIN      
        1 msygkdfvet lkrigypead elngedfdwm fessedksfl ewfcgningq nmvseeelqd
       61 fdnllqrgka vlegnaldev lktlepvgst nssqeedree vkkledelqt lqnlknlqih
      121 rhnklqllvt tnshllqtfq sreeearkyw keglevftaa nnkldnelqs liaavkefas
      181 fftasdsgqg sdahpmffsq isldrylsve ehstaaltsh lkklfyegis kcaenshegs
      241 fqledlikqi pfdetnevce ekqeiarlqa ayicgqnqli qlqaeeegln saikcaesll
      301 qsldkdigqq enidaqifsl saeisaikqd iaqinseell pllkkraqll tapvvteylg
      361 hqiarqncya aiqdkigrhl irqktsfefi qlgcememkk hqefscqlen lveslkqstd
      421 elqqrlqvia erteqakprs tispedglac rlyqlleggs kkqqlfktyk nleqmaqklk
      481 qdcaavedql aasareqsll lsslegdvda lhgalycgtn qiqlrspelt eqfhqlevdl
      541 gvlnnllkdl vadlkskksf lesnrllqme relyvyffkd eeqlkemvek leqqsqakas
      601 gledknftts gvlnv
//
LOCUS       XP_041315420             615 aa            linear   VRT 06-MAY-2021
DEFINITION  HAUS augmin-like complex subunit 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315420
VERSION     XP_041315420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..615
                     /product="HAUS augmin-like complex subunit 3"
                     /calculated_mol_wt=69812
     Region          29..285
                     /region_name="HAUS-augmin3"
                     /note="HAUS augmin-like complex subunit 3; pfam14932"
                     /db_xref="CDD:464384"
     Region          276..>506
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..615
                     /gene="HAUS3"
                     /coded_by="XM_041459486.1:420..2267"
                     /db_xref="GeneID:121349236"
ORIGIN      
        1 msygkdfvet lkrigypead elngedfdwm fessedksfl ewfcgningq nmvseeelqd
       61 fdnllqrgka vlegnaldev lktlepvgst nssqeedree vkkledelqt lqnlknlqih
      121 rhnklqllvt tnshllqtfq sreeearkyw keglevftaa nnkldnelqs liaavkefas
      181 fftasdsgqg sdahpmffsq isldrylsve ehstaaltsh lkklfyegis kcaenshegs
      241 fqledlikqi pfdetnevce ekqeiarlqa ayicgqnqli qlqaeeegln saikcaesll
      301 qsldkdigqq enidaqifsl saeisaikqd iaqinseell pllkkraqll tapvvteylg
      361 hqiarqncya aiqdkigrhl irqktsfefi qlgcememkk hqefscqlen lveslkqstd
      421 elqqrlqvia erteqakprs tispedglac rlyqlleggs kkqqlfktyk nleqmaqklk
      481 qdcaavedql aasareqsll lsslegdvda lhgalycgtn qiqlrspelt eqfhqlevdl
      541 gvlnnllkdl vadlkskksf lesnrllqme relyvyffkd eeqlkemvek leqqsqakas
      601 gledknftts gvlnv
//
LOCUS       XP_041315430             313 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 156 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041315430
VERSION     XP_041315430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="transmembrane protein 156 isoform X1"
                     /calculated_mol_wt=35746
     Region          43..267
                     /region_name="TMEM156"
                     /note="TMEM156 protein family; pfam15106"
                     /db_xref="CDD:464507"
     CDS             1..313
                     /gene="TMEM156"
                     /coded_by="XM_041459496.1:12..953"
                     /db_xref="GeneID:121349251"
ORIGIN      
        1 mclllrkpvv frlglgiitv filclpeffk iheantvmvs cmdtcsssnt tfplctfdns
       61 ykrsvkqrre tqtillkvii nnsdfqnipc icqsswreqq shpkqtecet krdvnvdhqg
      121 sgsmakktkg slevktesvi yfykyinftt vskkevehnm nylveihinn sivggknttn
      181 eqlnhsclla mmedqndcin islqlksyme ypmcmtkiiw ltlipvvfvf tvsivvykiv
      241 qenkrnsdyk qrvatsvstl ltrkssrhar tvsatkihpf pvktskqqvp lpaqttkilp
      301 vipeqehchv dql
//
LOCUS       XP_041315438             285 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 156 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315438
VERSION     XP_041315438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459504.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..285
                     /product="transmembrane protein 156 isoform X2"
                     /calculated_mol_wt=32627
     Region          43..267
                     /region_name="TMEM156"
                     /note="TMEM156 protein family; pfam15106"
                     /db_xref="CDD:464507"
     CDS             1..285
                     /gene="TMEM156"
                     /coded_by="XM_041459504.1:12..869"
                     /db_xref="GeneID:121349251"
ORIGIN      
        1 mclllrkpvv frlglgiitv filclpeffk iheantvmvs cmdtcsssnt tfplctfdns
       61 ykrsvkqrre tqtillkvii nnsdfqnipc icqsswreqq shpkqtecet krdvnvdhqg
      121 sgsmakktkg slevktesvi yfykyinftt vskkevehnm nylveihinn sivggknttn
      181 eqlnhsclla mmedqndcin islqlksyme ypmcmtkiiw ltlipvvfvf tvsivvykiv
      241 qenkrnsdyk qrvatsvstl ltrkssrhar tvsatkihpf pvlqe
//
LOCUS       XP_041315451             200 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 K [Pyrgilauda ruficollis].
ACCESSION   XP_041315451
VERSION     XP_041315451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="ubiquitin-conjugating enzyme E2 K"
                     /calculated_mol_wt=22276
     Region          6..151
                     /region_name="UBCc_UBE2K"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 K and related
                     proteins; cd23800"
                     /db_xref="CDD:467420"
     Region          163..200
                     /region_name="UBA_II_E2_UBE2K"
                     /note="UBA domain of vertebrate ubiquitin-conjugating
                     enzyme E2 K (UBE2K); cd14390"
                     /db_xref="CDD:270573"
     Site            order(171..174,191,194,198..199)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270573"
     CDS             1..200
                     /gene="UBE2K"
                     /coded_by="XM_041459517.1:130..732"
                     /db_xref="GeneID:121349264"
ORIGIN      
        1 maniavqrik refkevlkse etsknqikvd lvdenftelr geiagppdtp yeggryqlei
       61 kipetypfnp pkvrfitkiw hpnissvtga icldilkdqw aaamtlrtvl lslqallaaa
      121 epddpqdavv anqykqnpem fkqtarlwah vyagapvssp eytkkienlc amgfdrnavi
      181 valsskswdv etatelllsn
//
LOCUS       XP_041315461             101 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041315461
VERSION     XP_041315461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="small integral membrane protein 14"
                     /calculated_mol_wt=10898
     Region          3..99
                     /region_name="DUF2615"
                     /note="Protein of unknown function (DUF2615); pfam11027"
                     /db_xref="CDD:402563"
     CDS             1..101
                     /gene="SMIM14"
                     /coded_by="XM_041459527.1:83..388"
                     /db_xref="GeneID:121349274"
ORIGIN      
        1 maeggfdpce cicshehamr rlinllrqsq syctdteclq elpgpnsssd ngisfamimm
       61 awvvialvlf llrpsnlrgs ntvgkptsqh ngqeppappv d
//
LOCUS       XP_041315470             101 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041315470
VERSION     XP_041315470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="small integral membrane protein 14"
                     /calculated_mol_wt=10898
     Region          3..99
                     /region_name="DUF2615"
                     /note="Protein of unknown function (DUF2615); pfam11027"
                     /db_xref="CDD:402563"
     CDS             1..101
                     /gene="SMIM14"
                     /coded_by="XM_041459536.1:57..362"
                     /db_xref="GeneID:121349274"
ORIGIN      
        1 maeggfdpce cicshehamr rlinllrqsq syctdteclq elpgpnsssd ngisfamimm
       61 awvvialvlf llrpsnlrgs ntvgkptsqh ngqeppappv d
//
LOCUS       XP_041315479             101 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041315479
VERSION     XP_041315479.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459545.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="small integral membrane protein 14"
                     /calculated_mol_wt=10898
     Region          3..99
                     /region_name="DUF2615"
                     /note="Protein of unknown function (DUF2615); pfam11027"
                     /db_xref="CDD:402563"
     CDS             1..101
                     /gene="SMIM14"
                     /coded_by="XM_041459545.1:56..361"
                     /db_xref="GeneID:121349274"
ORIGIN      
        1 maeggfdpce cicshehamr rlinllrqsq syctdteclq elpgpnsssd ngisfamimm
       61 awvvialvlf llrpsnlrgs ntvgkptsqh ngqeppappv d
//
LOCUS       XP_041315487             101 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041315487
VERSION     XP_041315487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="small integral membrane protein 14"
                     /calculated_mol_wt=10898
     Region          3..99
                     /region_name="DUF2615"
                     /note="Protein of unknown function (DUF2615); pfam11027"
                     /db_xref="CDD:402563"
     CDS             1..101
                     /gene="SMIM14"
                     /coded_by="XM_041459553.1:61..366"
                     /db_xref="GeneID:121349274"
ORIGIN      
        1 maeggfdpce cicshehamr rlinllrqsq syctdteclq elpgpnsssd ngisfamimm
       61 awvvialvlf llrpsnlrgs ntvgkptsqh ngqeppappv d
//
LOCUS       XP_041315498             637 aa            linear   VRT 06-MAY-2021
DEFINITION  SLAIN motif-containing protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315498
VERSION     XP_041315498.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459564.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..637
                     /product="SLAIN motif-containing protein 2 isoform X1"
                     /calculated_mol_wt=67549
     Region          162..637
                     /region_name="SLAIN"
                     /note="SLAIN motif-containing family; pfam15301"
                     /db_xref="CDD:464627"
     CDS             1..637
                     /gene="SLAIN2"
                     /coded_by="XM_041459564.1:141..2054"
                     /db_xref="GeneID:121349293"
ORIGIN      
        1 maaadvrdap rpspapppaa rprsrggtaa spraaaalpa aamedvgsgv nadaevrklq
       61 elvkklekqn eqlrsrhgal paapvspkrl psagpssppp aaspspdgrc lspraaarhs
      121 lpeepgggdg gsggnglldd aavlrpeele rlagfdedet gwlytspkkk qnplkksvnp
      181 lvwcrqvldy pspdvecakk slihkleqtm salkrqslys spfsavsyas syspntgspy
      241 ssgfnspsst pvksalvkql ippgtsghlk isgdrnppls pqssldsels asemdedsig
      301 snyklndvtd vqilarmqee slrqeyaata srrssgsscn strrgtfsdq eldaqslede
      361 edgthhtvhp avsrfspspr sspwpspkqs prnsprsrsp arsieysrvs pqpmisrlqq
      421 prlslqghpt dlqtsnvkse eklrrslpnl srtsniqaes vknsrsdsnf qvpnggipri
      481 qpqasatlqr qknlpraafk tkqflqtpst kgvpssskfr spaapsplal rqpvkafgth
      541 gpgsvaspea aqlthssssp gplaaqssgl pspassinst tltrpagmrs glprpsapst
      601 ggipvprskl aqpvrrslpt pktygnvkde swkdgcy
//
LOCUS       XP_041315502             611 aa            linear   VRT 06-MAY-2021
DEFINITION  SLAIN motif-containing protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315502
VERSION     XP_041315502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..611
                     /product="SLAIN motif-containing protein 2 isoform X2"
                     /calculated_mol_wt=64592
     Region          162..611
                     /region_name="SLAIN"
                     /note="SLAIN motif-containing family; pfam15301"
                     /db_xref="CDD:464627"
     CDS             1..611
                     /gene="SLAIN2"
                     /coded_by="XM_041459568.1:138..1973"
                     /db_xref="GeneID:121349293"
ORIGIN      
        1 maaadvrdap rpspapppaa rprsrggtaa spraaaalpa aamedvgsgv nadaevrklq
       61 elvkklekqn eqlrsrhgal paapvspkrl psagpssppp aaspspdgrc lspraaarhs
      121 lpeepgggdg gsggnglldd aavlrpeele rlagfdedet gwlytspkkk qnplkksvnp
      181 lvwcrqvldy pspdvecakk slihkleqtm salkrqslys spfsavsyas syspntgspy
      241 ssgfnspsst pvksalvkql ippgtsghlk isgdrnppls pqssldsels asemdedsig
      301 snyklndvtd vqilarmqee slrqeyaata srrssgsscn strrgtfsdq eldaqslede
      361 edgthhtvhp avsrfspspr sspwpspkqs prnsprsrsp arsieysrvs pqpmisrlqq
      421 prlslqghpt dlqtsnvkse eklrrslpnl srtsniqaes vknsrsdsnf qvpnggipri
      481 qpqasaipss skfrspaaps plalrqpvka fgthgpgsva speaaqlths ssspgplaaq
      541 ssglpspass insttltrpa gmrsglprps apstggipvp rsklaqpvrr slptpktygn
      601 vkdeswkdgc y
//
LOCUS       XP_041315508             502 aa            linear   VRT 06-MAY-2021
DEFINITION  SLAIN motif-containing protein 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315508
VERSION     XP_041315508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="SLAIN motif-containing protein 2 isoform X3"
                     /calculated_mol_wt=53615
     Region          162..>486
                     /region_name="SLAIN"
                     /note="SLAIN motif-containing family; pfam15301"
                     /db_xref="CDD:464627"
     CDS             1..502
                     /gene="SLAIN2"
                     /coded_by="XM_041459574.1:157..1665"
                     /db_xref="GeneID:121349293"
ORIGIN      
        1 maaadvrdap rpspapppaa rprsrggtaa spraaaalpa aamedvgsgv nadaevrklq
       61 elvkklekqn eqlrsrhgal paapvspkrl psagpssppp aaspspdgrc lspraaarhs
      121 lpeepgggdg gsggnglldd aavlrpeele rlagfdedet gwlytspkkk qnplkksvnp
      181 lvwcrqvldy pspdvecakk slihkleqtm salkrqslys spfsavsyas syspntgspy
      241 ssgfnspsst pvksalvkql ippgtsghlk isgdrnppls pqssldsels asemdedsig
      301 snyklndvtd vqilarmqee slrqeyaata srrssgsscn strrgtfsdq eldaqslede
      361 edgthhtvhp avsrfspspr sspwpspkqs prnsprsrsp arsieysrvs pqpmisrlqq
      421 prlslqghpt dlqtsnvkse eklrrslpnl srtsniqaes vknsrsdsnf qvpnggipri
      481 qpqasanvcq slaidnrktv cv
//
LOCUS       XP_041315521             370 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/bile acid cotransporter 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041315521
VERSION     XP_041315521.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459587.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508100.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="sodium/bile acid cotransporter 4"
                     /calculated_mol_wt=38976
     Region          32..319
                     /region_name="SBF"
                     /note="Sodium Bile acid symporter family; cl19217"
                     /db_xref="CDD:450274"
     CDS             1..370
                     /gene="SLC10A4"
                     /coded_by="XM_041459587.1:17..1129"
                     /db_xref="GeneID:121349313"
ORIGIN      
        1 massaqppaa aggggpdggs lagggetfgd rslsqglsvl vglglcvtml glgcavelgq
       61 lgqqlrrpvg lllallgqfv ampllaflla lifaldevaa vavllcgccp ggnlsnlmsv
      121 lvdgdmnlsi imtasstlla lflmplclwi ysrhwintav vqllplgavs ltlgstllpi
      181 glgvliryrh praadllvki slwsllvtlv vlfiltgtml gpdllaqipa svyaiavlmp
      241 lagyalgygl atvfkmpphc rrtvsletgc qnvqlctail kltfspelig smymfpllya
      301 lfqsaeaglf vlaykmygkd sykqdalgee edtdisykkl keeevadtsy gtvtteehns
      361 iqmeptqtal
//
LOCUS       XP_041315615            1589 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE, RhoGEF and PH domain-containing protein 5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315615
VERSION     XP_041315615.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459681.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1589
                     /product="FYVE, RhoGEF and PH domain-containing protein 5"
                     /calculated_mol_wt=177500
     Region          1037..1220
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          1239..1361
                     /region_name="PH1_FGD5"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia protein 5, N-terminal Pleckstrin Homology (PH)
                     domain; cd15792"
                     /db_xref="CDD:275435"
     Region          1375..1441
                     /region_name="FYVE_FGD5"
                     /note="FYVE-like domain found in FYVE, RhoGEF and PH
                     domain-containing protein 5 (FGD5) and similar proteins;
                     cd15742"
                     /db_xref="CDD:277281"
     Region          1495..1583
                     /region_name="PH2_FGD5_FGD6"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia proteins 5 and 6 pleckstrin homology (PH)
                     domain, C-terminus; cd13237"
                     /db_xref="CDD:270057"
     CDS             1..1589
                     /gene="FGD5"
                     /coded_by="XM_041459681.1:164..4933"
                     /db_xref="GeneID:121349368"
ORIGIN      
        1 mnnaeiskpp lapkpkiigh lspapvskfs psllradilh hpnsvsrgpk ppiapkpkfs
       61 adtegksnnn nlnkyangkl vclggelcgg nqcnahclgs eadneyivvs eaqlpnkdsn
      121 dlehehdqnl dcsvenevse spekvekeed niasdentsn qevienerrn ssdtaeprep
      181 dseessrdcd qtkalceesl dapdrdnnat knvdededvv gdcietknrq etsynlelvk
      241 sssgcetdsd nilnrdeklm gdpcrdiiam slpedesipa cekvgqeeee elpeilemad
      301 gclaqnders vhaeldlnme gnsqnddcag pdmlpeetse etgpdlelcg depsarngla
      361 efihqaaaee eevdpnehnn tntgnasggc qiterksekt sevaceaskd sgkeeeetvn
      421 aenmddvcqi apceneccee ipvehsdenl qteeaslhed gmisdslacs pgmepeleav
      481 tveehsentv easksdelll kdneleanil sksvpglpqe vplednleic khgkinvecg
      541 tkhvldenla vpevvivtde seeretssds lddpyvlpee neivhdvqtd leadhikrge
      601 lgidgensll pidrksivtr trslsgrmpg yvpetvpeet gpetdlpssr nvsgtedlsn
      661 nsfslegkpv eanralptks rrfilyprsy svegreipis vyresdvcll dgvrikrted
      721 nlslpcvngs sgsfsqqnhl sscgistpss vvdipppfel ayitkkpitk sspslliend
      781 spakytkkkk ssfkrfltlk fkkksenkvh vdvnvsssrs ssessyhgpn rlmelegrsl
      841 ssspqlkshv gklrasesps avlfykdgkr kgtpksfsrs vsrvesfedr srppfmplpl
      901 tkprsisfpn adtsdyenip amssdyeniq ippqrstrag tfteffedps ralsaanend
      961 gyvdmssftg fenkqqttdq etesaytepy kvcpvsvmpm eavtsdeeqk sseddesslg
     1021 dpsltnkkeg qsrayliaqe lmsseklyve mlqllrmdfy egvlkvlgdd deneqeevkl
     1081 kqglselpei yelhqdilee leervlkwde hqkvadvfls rksrlnhhtt yimqfdrnla
     1141 lldemclkys qlatmiqefe qssgdspysv khqllkvvhr vfqyrvmltd ylnnlcpdst
     1201 eyeatqaalf ivseitdqan dsmlqaenlq klvhiehsvr gqsgllqpgr ifvkegtlmk
     1261 isgknrhprh lflmndvlly typqkdgkyr lkntwavsgm kvtrpmieka qnilkieyge
     1321 hcltlsassc serddwysci tkhmpddcka hktstfhssv elrerlgipl gerpptlvpv
     1381 shvmmcmncg cdftltlrrh hchacgkivc rncsrnkypm kylkdqaakv cdncyvelkk
     1441 rerplsvsfp ptssrcsssa fssvfhnihy ssfkkqkkip salmevaasg egatisgyls
     1501 rckggkrhwk krwfvikgkv lytyianedk vateslpllg ftiapekeeg stdtvfhlyh
     1561 kqtlfysfra ednnsahrwi eameeasil
//
LOCUS       XP_041315626             463 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat and transmembrane domain-containing protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041315626
VERSION     XP_041315626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459692.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="leucine-rich repeat and transmembrane
                     domain-containing protein 1"
                     /calculated_mol_wt=51374
     Region          <153..>317
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          170..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          192..252
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          194..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          218..241
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          242..265
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          266..277
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..463
                     /gene="LRTM1"
                     /coded_by="XM_041459692.1:1..1392"
                     /db_xref="GeneID:121349378"
ORIGIN      
        1 msefslneqw ktevlplysg tsslllpsrr llelvveddv rlettkpegr qwqmvfpgdr
       61 aaaegeemlg scceaklkge qdddcceaev hpnskhqgkl kglkpfdkyl vtvwkpasvg
      121 snwllvwsii llahtvhscp ekclcytask tadcrnrglt eiparlppei qilqlqnnri
      181 wrinqnafta tpllkildls nnslssvapg afqklrylqv lnltrnmihy ienktfsflp
      241 hlkeldlssn siirlpetfg nstgnitlls vkhnklqkme rilleslpnl kvvlfkdnpw
      301 qcncnifgmk lwlesflyrg gisdgiicsa pgvrkgkdll kvpyelfgac plrtaplqpa
      361 sshqhgfeqr swpkhghhge pgdggrggce pkarprpvsl rhaiatvvit gvvcgvvclm
      421 mlaaavygca yaaitaryhk ehpapgrqhg aaeekepfes saa
//
LOCUS       XP_041315638             672 aa            linear   VRT 06-MAY-2021
DEFINITION  extracellular matrix protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315638
VERSION     XP_041315638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459704.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..672
                     /product="extracellular matrix protein 2"
                     /calculated_mol_wt=74987
     Region          95..149
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     Region          277..606
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          286..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          306..329
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          330..355
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          356..376
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          377..400
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          401..426
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          427..446
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          448..471
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          472..497
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          520..540
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          544..570
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          571..593
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..672
                     /gene="ECM2"
                     /coded_by="XM_041459704.1:228..2246"
                     /db_xref="GeneID:121349384"
ORIGIN      
        1 mqapsllcyf lllwlcrdlc paeggtgrrq rrrmpprglg gspwaghrsp raagmgprip
       61 litidgsvmg vfdslvglgq hesaysvlpg kkgqctangm imfdkavwsp qpcvtclcsq
      121 gevicdtamc hplkcpqtii pageccpvcs etvssldssi islddvsels gdspdpkdld
      181 ttsvlpsagt qmekeellpt kvievrdkkg hkkgekkrkr kgktnrqrhk grhreklpvp
      241 rtgaagdvqy dsdeddgafr ipshfpipvp pieapplpsg cstsdttvsc inakltqipp
      301 isdpdltsld ltgntittis deafngipnl ewidlsknni tspgigpkaf kilkklkrly
      361 ldgnmlalip selpstleei kindnqlhai dedglkdlkn lvtlelegnk lseanvspla
      421 fyplkslsyl rlgrnkfrii pqglpatlee lylehnqiee vseicfnhtr niniiglkhn
      481 kleehriapl awinqenles idlsynklyh vpsylpksll hlvlignqie ripgyvfghm
      541 rpgleylyls fnkltddgid pvsffgayhs lrelfldhne lkavpfgide mrklrflrln
      601 nnkirtvppe ricrtqshhe dehdhseeeh edshlehvhl ennyintrql sphsfscirs
      661 ycsvvlkpqk tk
//
LOCUS       XP_041315652             491 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol-pentakisphosphate 2-kinase [Pyrgilauda ruficollis].
ACCESSION   XP_041315652
VERSION     XP_041315652.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459718.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="inositol-pentakisphosphate 2-kinase"
                     /calculated_mol_wt=56484
     Region          13..452
                     /region_name="Ins_P5_2-kin"
                     /note="Inositol-pentakisphosphate 2-kinase; pfam06090"
                     /db_xref="CDD:461826"
     CDS             1..491
                     /gene="IPPK"
                     /coded_by="XM_041459718.1:81..1556"
                     /db_xref="GeneID:121349392"
ORIGIN      
        1 mevekmdene wkyhgegnqs lvvshcqrcv vlrflksppn qnktpeeilh hlqnivdfgk
       61 hvmkqffgen yvhhgeiiql pldfvrqlcl kiqperpecr cdkdmdtlsg yamclpnltr
      121 lqpfrfaehr pilcieikpk cgfipfsshv sqeikhkvcr ycmhqhlkva ngkwkrpsky
      181 cpldlfsgnk qrmhfalksl lqeaqnnlki fkngeliygc kddqdcvsdw nelarhlkpf
      241 ffpsnglvsg phctrtivke lihvitmall sstdtcragd mktvpisqgr syceasafnk
      301 elvrngkhkl essglprgcl lyktlqaqml dmldieglyp lysrveqyle efpeerstlq
      361 idgpyneafy eklldlsled dgtvafaltk vqqyriamta kdcsimials pclqdecseq
      421 rpvvltsksr ftfsvsvldl dlkpyesiph qykldgeivn yylknvqake dpvmsslfke
      481 nedctlvlhk v
//
LOCUS       XP_041315666             417 aa            linear   VRT 06-MAY-2021
DEFINITION  osteomodulin [Pyrgilauda ruficollis].
ACCESSION   XP_041315666
VERSION     XP_041315666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459732.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="osteomodulin"
                     /calculated_mol_wt=48385
     Region          60..92
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          73..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <89..344
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          91..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..211
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          212..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..299
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..417
                     /gene="OMD"
                     /coded_by="XM_041459732.1:70..1323"
                     /db_xref="GeneID:121349397"
ORIGIN      
        1 mgilsnlsil hllctalvfc qyedydfede yggepdhqlp yyfnpnaqae vprfpfpvec
       61 akecfcppaf plsmycdhrk lktipnipsh vqqlylqnnn ieavpagpft nvtfireinl
      121 synnikfhmi dhgvfaklsh lvqlhlqhne leefpfplps slerlllafn kisrlpanal
      181 eglpnmttld lcnnllddsv fkekpfsnmk nlmqlnlcnn klqtmppdlp pslrhlslen
      241 nsishipeny fhrlphiial rmshnnlqdi spntfnlpnl lelnlghnkl kqvfyiprsl
      301 qhlyiednei eninvtvmcp tldalnikql tyirvdqnkl tspistyaff cfplirtiyy
      361 geqnvtvsrp sqlrtpvfrr fltpeefqea ednhetlnqe teedheaeds yfhpyyh
//
LOCUS       XP_041315677             371 aa            linear   VRT 06-MAY-2021
DEFINITION  asporin [Pyrgilauda ruficollis].
ACCESSION   XP_041315677
VERSION     XP_041315677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="asporin"
                     /calculated_mol_wt=42076
     Region          66..95
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          74..94
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          95..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <111..>318
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          119..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          213..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..281
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..324
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..371
                     /gene="ASPN"
                     /coded_by="XM_041459743.1:307..1422"
                     /db_xref="GeneID:121349400"
ORIGIN      
        1 mkeytlllfl alcsaksltg psyftlknmm lqdmeddddd ddddnslfpt tepilplipf
       61 dlfptcpfgc qcyvrvvhcs dlgltsiprn ippdtrmidl qnnkikevke ndlqgltsly
      121 alalnnnkiy kihpkafqpt krlrrlylsh nqlteiptnl prtlaelrih ankvkkipkd
      181 vfkgmkslhv lemsanplnn dgiepgafeg vniyhiriae akltsipkdl pssllelhld
      241 dnkitgieve dfnrykdlqr lglgnnkike vengsfanip sireihlekn klkkvppglp
      301 dlkylqvvfl hsnhiaklgv ndfcptgrrk kkalysgisl fnnpvkywev qpstfrcila
      361 rnsvqlgnfl k
//
LOCUS       XP_041315693             293 aa            linear   VRT 06-MAY-2021
DEFINITION  mimecan [Pyrgilauda ruficollis].
ACCESSION   XP_041315693
VERSION     XP_041315693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459759.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..293
                     /product="mimecan"
                     /calculated_mol_wt=33247
     Region          <118..>244
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          118..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          140..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          184..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          210..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          231..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          262..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..293
                     /gene="OGN"
                     /coded_by="XM_041459759.1:232..1113"
                     /db_xref="GeneID:121349404"
ORIGIN      
        1 metlqatffl fvfvplvnpa pplqqeslqf ydydrdvsme sltqqdyemq skdirkdgtn
       61 vsldtslmlq sddsqldvpp tkdtnlptcl lcvclsgsvy ceeidieavp plpketayly
      121 arfnkikria asdfadittl rridfsgnri eeiedgafsk lllleelsla enrlvklpvl
      181 ppklttfnan qnriksrgik anafkkltnl aylylghnal esvplnlpes lrilhlqynn
      241 ittitddtfc ksnntryirt rmdeirmegn pivlakhvna fsclrmlpvg tyy
//
LOCUS       XP_041315707             287 aa            linear   VRT 06-MAY-2021
DEFINITION  centromere protein P [Pyrgilauda ruficollis].
ACCESSION   XP_041315707
VERSION     XP_041315707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="centromere protein P"
                     /calculated_mol_wt=33113
     Region          105..280
                     /region_name="CENP-P"
                     /note="CENP-A-nucleosome distal (CAD) centromere subunit,
                     CENP-P; pfam13096"
                     /db_xref="CDD:289841"
     CDS             1..287
                     /gene="LOC121349408"
                     /coded_by="XM_041459773.1:70..933"
                     /db_xref="GeneID:121349408"
ORIGIN      
        1 mdegdfqaye deiqaleeei rllteeyedm rqestffsde eilksiksfq tetqgktkgh
       61 espsdliaql esletdlsfl meftgfhfts hskktvektq nrtvqkhrls grchslsfql
      121 efqllemqnn ekvsavvsdl siimesreds nvskfvsrte ehgdlltffr sistyaewhe
      181 hrrhtfhhfk akypdivtlp egllgdfiil rnpnisgfel mivwkihlde egtttpvldl
      241 lpkvpeqvle qrmrsvesip grfrsalqlf gieaaienli kvlgsek
//
LOCUS       XP_041315721            1493 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETD5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315721
VERSION     XP_041315721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1493
                     /product="histone-lysine N-methyltransferase SETD5 isoform
                     X1"
                     /calculated_mol_wt=162302
     Region          302..451
                     /region_name="SET_SETD5"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 5 (SETD5) and similar proteins;
                     cd19181"
                     /db_xref="CDD:380958"
     Site            order(319..320,337,347,357..364,384..388,396,412,423..429)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380958"
     Site            order(319..320,357..360,384..388,425)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380958"
     CDS             1..1493
                     /gene="SETD5"
                     /coded_by="XM_041459787.1:239..4720"
                     /db_xref="GeneID:121349414"
ORIGIN      
        1 msiaiplgvt tpdtsysdma agsdpesvea spavseknvy sshgygatqk hsyrglpyad
       61 hnygappppt ppasppvqti ipraelnglh spdeensgds esssegesip twchcsvsqd
      121 gfllkcekcr gmsrgkvirl rhrkqdnvsg gdssateswd eelspstvly tatqhtptsi
      181 tltvnrvrrs kpkkrkrste karaapkakk ikafregsrk slrmknspse ahaldentae
      241 gwenrirlwt dqyeeaftnq ysadvqnlle rhlnsnkdyv gktamldtin ktelacnntv
      301 igsqmqlqlg rvtrvqkhrk ilraardlal dtliieyrgk vmlrqqfevn ghffkkpypf
      361 vlfyskfngv emcvdartfg ndarfirrsc tpnaevrhvi adgmihlciy avatiakdte
      421 vtiafdyeyn icnykvdcac hkgnrncpvq krspnaaehl pppvlgtlig aetrrrkarr
      481 kelemeqqsi asdenssqqt eevpegpaav sdnevpekee kqegekeepv deqgalvhsr
      541 rsredrkvea imhmfenlek rkrrreqpsd rnstdaeisv nseapeleev ktetpetedg
      601 saalsapppp pppppppppa pvsnstsstg vntrrssqva davpektvtk papakpsrpr
      661 pksrfsryrt ssaqrlrrqk qassqqaelt qavpeegnta slvtitdvsn vegpgegrql
      721 tgsdptaila tgsqskaavk ypktkkylvt ewlndkaekq ecpiecplri ttdptvlatt
      781 lnmlpglvhs plicttpkhy irfgspfnpe rrrrpflldg iyssckkrwi kqaleegmtq
      841 tspapqenrt qclyqsnens ssssickddt dllsplkkwk srylmeqnvk kllrplspvt
      901 ppppvpsvpg aaspqlatpc sslpgeeetr ngygimfspi pslaasrcnt plqfenvssp
      961 esspahrpes mspevclrsd ldlkggylds santcqerps llsfassdva pqssinstse
     1021 mnfpgksgea qmllrssdqa frtefnlmya fsplnamprv dgllrgsppl adrkpmnsda
     1081 gccsspaegy fsrhesgllk etahgsmspc seraaegtra apqnppqrkk vslleyrkrk
     1141 qeakeggesg rsagtptrqg ggpgadadgn gppgstartp sspqsgfsps hpslphledi
     1201 sppdsrgcss ssslsksqes issrwmvpts verlregrgm lekvlrsgak vsqrhessps
     1261 qdcalerdad aaegdtpeah kgpavyspsr ysyqllqsds pqaesqtllq qnsspyrghl
     1321 apspgysyra aaqrtghsls hgssetslss tsysspahsv stdssalfag nsgyfssqqh
     1381 sgsvsssllr kscpaaaspa qqtavdslss esgsqpctgv sgsssapqsa rslqsdlrti
     1441 slpnsgqsvl yqgsrgavis naqhyphrgg gsvhqyrlqq lqgsgvktqt gls
//
LOCUS       XP_041315729            1362 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETD5 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315729
VERSION     XP_041315729.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459795.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1362
                     /product="histone-lysine N-methyltransferase SETD5 isoform
                     X2"
                     /calculated_mol_wt=148529
     Region          171..320
                     /region_name="SET_SETD5"
                     /note="SET domain (including post-SET domain) found in SET
                     domain-containing protein 5 (SETD5) and similar proteins;
                     cd19181"
                     /db_xref="CDD:380958"
     Site            order(188..189,206,216,226..233,253..257,265,281,292..298)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380958"
     Site            order(188..189,226..229,253..257,294)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380958"
     CDS             1..1362
                     /gene="SETD5"
                     /coded_by="XM_041459795.1:450..4538"
                     /db_xref="GeneID:121349414"
ORIGIN      
        1 msrgkvirlr hrkqdnvsgg dssateswde elspstvlyt atqhtptsit ltvnrvrrsk
       61 pkkrkrstek araapkakki kafregsrks lrmknspsea haldentaeg wenrirlwtd
      121 qyeeaftnqy sadvqnller hlnsnkdyvg ktamldtink telacnntvi gsqmqlqlgr
      181 vtrvqkhrki lraardlald tliieyrgkv mlrqqfevng hffkkpypfv lfyskfngve
      241 mcvdartfgn darfirrsct pnaevrhvia dgmihlciya vatiakdtev tiafdyeyni
      301 cnykvdcach kgnrncpvqk rspnaaehlp ppvlgtliga etrrrkarrk elemeqqsia
      361 sdenssqqte evpegpaavs dnevpekeek qegekeepvd eqgalvhsrr sredrkveai
      421 mhmfenlekr krrreqpsdr nstdaeisvn seapeleevk tetpetedgs aalsappppp
      481 ppppppppap vsnstsstgv ntrrssqvad avpektvtkp apakpsrprp ksrfsryrts
      541 saqrlrrqkq assqqaeltq avpeegntas lvtitdvsnv egpgegrqlt gsdptailat
      601 gsqskaavky pktkkylvte wlndkaekqe cpiecplrit tdptvlattl nmlpglvhsp
      661 licttpkhyi rfgspfnper rrrpflldgi yssckkrwik qaleegmtqt spapqenrtq
      721 clyqsnenss sssickddtd llsplkkwks rylmeqnvkk llrplspvtp pppvpsvpga
      781 aspqlatpcs slpgeeetrn gygimfspip slaasrcntp lqfenvsspe sspahrpesm
      841 spevclrsdl dlkggyldss antcqerpsl lsfassdvap qssinstsem nfpgksgeaq
      901 mllrssdqaf rtefnlmyaf splnamprvd gllrgsppla drkpmnsdag ccsspaegyf
      961 srhesgllke tahgsmspcs eraaegtraa pqnppqrkkv slleyrkrkq eakeggesgr
     1021 sagtptrqgg gpgadadgng ppgstartps spqsgfspsh pslphledis ppdsrgcsss
     1081 sslsksqesi ssrwmvptsv erlregrgml ekvlrsgakv sqrhesspsq dcalerdada
     1141 aegdtpeahk gpavyspsry syqllqsdsp qaesqtllqq nsspyrghla pspgysyraa
     1201 aqrtghslsh gssetslsst sysspahsvs tdssalfagn sgyfssqqhs gsvsssllrk
     1261 scpaaaspaq qtavdslsse sgsqpctgvs gsssapqsar slqsdlrtis lpnsgqsvly
     1321 qgsrgavisn aqhyphrggg svhqyrlqql qgsgvktqtg ls
//
LOCUS       XP_041315742             222 aa            linear   VRT 06-MAY-2021
DEFINITION  LHFPL tetraspan subfamily member 4 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041315742
VERSION     XP_041315742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="LHFPL tetraspan subfamily member 4 protein"
                     /calculated_mol_wt=24431
     Region          22..200
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..222
                     /gene="LHFPL4"
                     /coded_by="XM_041459808.1:129..797"
                     /db_xref="GeneID:121349421"
ORIGIN      
        1 mlpsqeaskl yhdnyvrnsr aigvlwaift icfaiinvvv fiqpywvgds vntpkpgyfg
       61 lfhycvgsgl agrelscrgs ftdfstipsg afqaaaffvl lsmvltlgci tcfalfffcn
      121 tatvykicaw mqllaalclv lgcmifpdgw daetirdmcg ektgkyslgd csvrwayila
      181 iigilnalil sflafvlgnr qndllheelk teskdfvgta ri
//
LOCUS       XP_041315761            1946 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-D1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041315761
VERSION     XP_041315761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1946
                     /product="plexin-D1 isoform X1"
                     /calculated_mol_wt=215054
     Region          43..560
                     /region_name="Sema_plexin_D1"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin D1; cd11247"
                     /db_xref="CDD:200508"
     Region          562..614
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          635..712
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          724..766
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          776..860
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          907..995
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          997..1081
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          1085..1194
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          1365..1904
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1946
                     /gene="PLXND1"
                     /coded_by="XM_041459827.1:26..5866"
                     /db_xref="GeneID:121349425"
ORIGIN      
        1 mapapvpapa paagaeprpp allplllpll plllpgraag levqrkflsp tltnnfaldg
       61 pgsrvylaav nrlfqlsgge laleaeaavg pvldsplcha pqlpqasceh pkvltnnynk
      121 ilqpdpeqgv lvvcgsiyqg lcqlrsmani savavrfppg gsdsvtvfps mlnvaanhpn
      181 astvglvlrr gggggarllv aatytgfgsp ffprnhsled hrfentpeia iralnargdl
      241 aklftfdinp sddnilkika gdkarhklsf vraflqhgaa pparrpyayl alnseanagd
      301 kespahslla riclgepaea tlngsgetkk ltesyiqlgl rcggaadaft rlvsvfpara
      361 awrspaaapg papapppaee llfgvferag aggargrpqs alcvfrfaei eetiraarns
      421 cfvspaagmv tvldsvvqgt gpacekrniq lqpeqldcga ahlqhplaiv npvtatpvft
      481 hsgltavava svnnytvvfl gtagggllki nldstmkvis rrsisvayge pvhpimqfdp
      541 sdstylylmt syqmtrvkva acsqystcae claaadaycg wctmetrcsl qhectnftga
      601 nvwasvsegv qqcpsmtile peinidkehp aliiqingti pnlngtnisc dygnnihtva
      661 rvagdyvnqf iycnllphek ypafpddqdh vvvetslrvn nkniiranft iydckrigni
      721 ypkractscl sarwkchwcp styscvsnrs qcedalrmeq kkidcpqivp aplepmptgv
      781 srnivislan atfsketale chfgtdgtfe arwvnssave cvhvllhtse kshrfpvnlq
      841 lkdkpdrfid spemmtvevy ncatgsadcs qclgredlgh rclwsessss crlqteppqv
      901 sevcpppeir kieplrgple ggtlltirgr nlgrrfsdia gavrvggvrc aplpgryvvs
      961 etvvcqtgea peafsdvvtv nvsregrsre rysyvlpvvq siaplngpka ggtrvtirgs
     1021 rldvgselrv linsskqctd lsrtdstitc tmpaveltta vpvcvqfenk scashnitfk
     1081 yeknpvisdi npkksqisgg riitlegrgf glvqnvsmav rgigrehtrc kvhsdtaitc
     1141 pspaasnvtv gskpapvdfy lngrlytder aaldedmype ealhvskfsl gyyadpqfst
     1201 akkekwikhh pgepltlvih kepdslgles neyqvkigli sceiqivsdk vihcsinesl
     1261 ssserqlpvt iqvgkfnyti amlhlggget aiivsivics illvlsvval fvfctksrra
     1321 erywqktllq meemesqire eirkgfaelq tdmtdltkel nrsqgipfle ykhfvtrtff
     1381 pkcsslyeec yilpsqqlss qvgsqvqeth pllvgewkip encrpnmeeg islfstllnn
     1441 khflivfvha leqqkdfavr drcnlasllt ialhgkleyy tsimkdllvd lidasasknp
     1501 klmlrrtesv vekmltnwms icmysylret vgepffllic aikqqinkgs idaitgkary
     1561 tlneewllre nieakprnln vsfqgcgmds lsvramdtdt lsqvkekile afcknvpysq
     1621 wprvedvdle wfatstdsyi lrdlddtsvv edgrkklntl ahykipegas lamsltdkkd
     1681 ttlsrvkdld tekyfhlvlp tdesvehkks hrqshrkkvl peiyltrlls tkgtlqkfld
     1741 dlfkailsir ddkppvavky ffdfleeqae krgitdpdtl hiwktnslpl rfwvnilknp
     1801 qfvfdidktd hidaclsvia qafidacsls dlqlgkdspt nkllyakeip eyrkivqryy
     1861 kqihdmppls eqemnahlae esrkyrnefn tnvamaeiyk yakryrsqiv aaldanpttk
     1921 rtqlqhkfeq vialmedniy escsea
//
LOCUS       XP_041315770            1945 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-D1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315770
VERSION     XP_041315770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1945
                     /product="plexin-D1 isoform X2"
                     /calculated_mol_wt=214926
     Region          43..560
                     /region_name="Sema_plexin_D1"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin D1; cd11247"
                     /db_xref="CDD:200508"
     Region          562..614
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          635..712
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          724..>752
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          775..859
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          906..994
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          996..1080
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          1084..1193
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          1364..1903
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1945
                     /gene="PLXND1"
                     /coded_by="XM_041459836.1:26..5863"
                     /db_xref="GeneID:121349425"
ORIGIN      
        1 mapapvpapa paagaeprpp allplllpll plllpgraag levqrkflsp tltnnfaldg
       61 pgsrvylaav nrlfqlsgge laleaeaavg pvldsplcha pqlpqasceh pkvltnnynk
      121 ilqpdpeqgv lvvcgsiyqg lcqlrsmani savavrfppg gsdsvtvfps mlnvaanhpn
      181 astvglvlrr gggggarllv aatytgfgsp ffprnhsled hrfentpeia iralnargdl
      241 aklftfdinp sddnilkika gdkarhklsf vraflqhgaa pparrpyayl alnseanagd
      301 kespahslla riclgepaea tlngsgetkk ltesyiqlgl rcggaadaft rlvsvfpara
      361 awrspaaapg papapppaee llfgvferag aggargrpqs alcvfrfaei eetiraarns
      421 cfvspaagmv tvldsvvqgt gpacekrniq lqpeqldcga ahlqhplaiv npvtatpvft
      481 hsgltavava svnnytvvfl gtagggllki nldstmkvis rrsisvayge pvhpimqfdp
      541 sdstylylmt syqmtrvkva acsqystcae claaadaycg wctmetrcsl qhectnftga
      601 nvwasvsegv qqcpsmtile peinidkehp aliiqingti pnlngtnisc dygnnihtva
      661 rvagdyvnqf iycnllphek ypafpddqdh vvvetslrvn nkniiranft iydckrigni
      721 ypkractscl sarwkchwcp styscvsnrs qcedalrmek kidcpqivpa plepmptgvs
      781 rnivislana tfsketalec hfgtdgtfea rwvnssavec vhvllhtsek shrfpvnlql
      841 kdkpdrfids pemmtvevyn catgsadcsq clgredlghr clwsessssc rlqteppqvs
      901 evcpppeirk ieplrgpleg gtlltirgrn lgrrfsdiag avrvggvrca plpgryvvse
      961 tvvcqtgeap eafsdvvtvn vsregrsrer ysyvlpvvqs iaplngpkag gtrvtirgsr
     1021 ldvgselrvl insskqctdl srtdstitct mpavelttav pvcvqfenks cashnitfky
     1081 eknpvisdin pkksqisggr iitlegrgfg lvqnvsmavr gigrehtrck vhsdtaitcp
     1141 spaasnvtvg skpapvdfyl ngrlytdera aldedmypee alhvskfslg yyadpqfsta
     1201 kkekwikhhp gepltlvihk epdslglesn eyqvkiglis ceiqivsdkv ihcsinesls
     1261 sserqlpvti qvgkfnytia mlhlgggeta iivsivicsi llvlsvvalf vfctksrrae
     1321 rywqktllqm eemesqiree irkgfaelqt dmtdltkeln rsqgipfley khfvtrtffp
     1381 kcsslyeecy ilpsqqlssq vgsqvqethp llvgewkipe ncrpnmeegi slfstllnnk
     1441 hflivfvhal eqqkdfavrd rcnlasllti alhgkleyyt simkdllvdl idasasknpk
     1501 lmlrrtesvv ekmltnwmsi cmysylretv gepffllica ikqqinkgsi daitgkaryt
     1561 lneewllren ieakprnlnv sfqgcgmdsl svramdtdtl sqvkekilea fcknvpysqw
     1621 prvedvdlew fatstdsyil rdlddtsvve dgrkklntla hykipegasl amsltdkkdt
     1681 tlsrvkdldt ekyfhlvlpt desvehkksh rqshrkkvlp eiyltrllst kgtlqkfldd
     1741 lfkailsird dkppvavkyf fdfleeqaek rgitdpdtlh iwktnslplr fwvnilknpq
     1801 fvfdidktdh idaclsviaq afidacslsd lqlgkdsptn kllyakeipe yrkivqryyk
     1861 qihdmpplse qemnahlaee srkyrnefnt nvamaeiyky akryrsqiva aldanpttkr
     1921 tqlqhkfeqv ialmedniye scsea
//
LOCUS       XP_041315779            1890 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-D1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315779
VERSION     XP_041315779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1890
                     /product="plexin-D1 isoform X3"
                     /calculated_mol_wt=208885
     Region          43..560
                     /region_name="Sema_plexin_D1"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin D1; cd11247"
                     /db_xref="CDD:200508"
     Region          562..614
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          635..712
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          724..766
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          776..860
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          907..995
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          997..>1042
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1041..1138
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          1309..1848
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1890
                     /gene="PLXND1"
                     /coded_by="XM_041459845.1:26..5698"
                     /db_xref="GeneID:121349425"
ORIGIN      
        1 mapapvpapa paagaeprpp allplllpll plllpgraag levqrkflsp tltnnfaldg
       61 pgsrvylaav nrlfqlsgge laleaeaavg pvldsplcha pqlpqasceh pkvltnnynk
      121 ilqpdpeqgv lvvcgsiyqg lcqlrsmani savavrfppg gsdsvtvfps mlnvaanhpn
      181 astvglvlrr gggggarllv aatytgfgsp ffprnhsled hrfentpeia iralnargdl
      241 aklftfdinp sddnilkika gdkarhklsf vraflqhgaa pparrpyayl alnseanagd
      301 kespahslla riclgepaea tlngsgetkk ltesyiqlgl rcggaadaft rlvsvfpara
      361 awrspaaapg papapppaee llfgvferag aggargrpqs alcvfrfaei eetiraarns
      421 cfvspaagmv tvldsvvqgt gpacekrniq lqpeqldcga ahlqhplaiv npvtatpvft
      481 hsgltavava svnnytvvfl gtagggllki nldstmkvis rrsisvayge pvhpimqfdp
      541 sdstylylmt syqmtrvkva acsqystcae claaadaycg wctmetrcsl qhectnftga
      601 nvwasvsegv qqcpsmtile peinidkehp aliiqingti pnlngtnisc dygnnihtva
      661 rvagdyvnqf iycnllphek ypafpddqdh vvvetslrvn nkniiranft iydckrigni
      721 ypkractscl sarwkchwcp styscvsnrs qcedalrmeq kkidcpqivp aplepmptgv
      781 srnivislan atfsketale chfgtdgtfe arwvnssave cvhvllhtse kshrfpvnlq
      841 lkdkpdrfid spemmtvevy ncatgsadcs qclgredlgh rclwsessss crlqteppqv
      901 sevcpppeir kieplrgple ggtlltirgr nlgrrfsdia gavrvggvrc aplpgryvvs
      961 etvvcqtgea peafsdvvtv nvsregrsre rysyvlpvvq siaplngpka ggtrvtirgs
     1021 rldvgselrv linsskqctd lsggriitle grgfglvqnv smavrgigre htrckvhsdt
     1081 aitcpspaas nvtvgskpap vdfylngrly tderaalded mypeealhvs kfslgyyadp
     1141 qfstakkekw ikhhpgeplt lvihkepdsl glesneyqvk iglisceiqi vsdkvihcsi
     1201 neslssserq lpvtiqvgkf nytiamlhlg ggetaiivsi vicsillvls vvalfvfctk
     1261 srraerywqk tllqmeemes qireeirkgf aelqtdmtdl tkelnrsqgi pfleykhfvt
     1321 rtffpkcssl yeecyilpsq qlssqvgsqv qethpllvge wkipencrpn meegislfst
     1381 llnnkhfliv fvhaleqqkd favrdrcnla slltialhgk leyytsimkd llvdlidasa
     1441 sknpklmlrr tesvvekmlt nwmsicmysy lretvgepff llicaikqqi nkgsidaitg
     1501 karytlneew llrenieakp rnlnvsfqgc gmdslsvram dtdtlsqvke kileafcknv
     1561 pysqwprved vdlewfatst dsyilrdldd tsvvedgrkk lntlahykip egaslamslt
     1621 dkkdttlsrv kdldtekyfh lvlptdesve hkkshrqshr kkvlpeiylt rllstkgtlq
     1681 kflddlfkai lsirddkppv avkyffdfle eqaekrgitd pdtlhiwktn slplrfwvni
     1741 lknpqfvfdi dktdhidacl sviaqafida cslsdlqlgk dsptnkllya keipeyrkiv
     1801 qryykqihdm pplseqemna hlaeesrkyr nefntnvama eiykyakryr sqivaaldan
     1861 pttkrtqlqh kfeqvialme dniyescsea
//
LOCUS       XP_041315791             294 aa            linear   VRT 06-MAY-2021
DEFINITION  histone H1.8 [Pyrgilauda ruficollis].
ACCESSION   XP_041315791
VERSION     XP_041315791.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459857.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="histone H1.8"
                     /calculated_mol_wt=30522
     Region          29..102
                     /region_name="Linker_histone"
                     /note="linker histone H1 and H5 family; pfam00538"
                     /db_xref="CDD:459846"
     Region          <100..>214
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..294
                     /gene="LOC121349440"
                     /coded_by="XM_041459857.1:1979..2863"
                     /db_xref="GeneID:121349440"
ORIGIN      
        1 msqtglqsqm vplaaakaag ivprypahhp ptlqmvkeal rahdarkgas vvaikrfild
       61 kyptvdpirl kyllkqalsk glscgdlvrp hnssavgatg tfklarkkpg hkqelgqadp
      121 dggqapkpaq kgttkdpqap vagarprgas kqqpkakpvk aqpraaekpr snrvkhpqta
      181 drpqahgpgp sgppkaaghr qaprkgrsgp staraaentg gsdsdssgsa gvkgpqkapr
      241 gkskvkvpkr aqqdapktqg gqdkarkprv tagdgqgkar mkkaapvaad rkap
//
LOCUS       XP_041315807             568 aa            linear   VRT 06-MAY-2021
DEFINITION  leiomodin-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315807
VERSION     XP_041315807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="leiomodin-3"
                     /calculated_mol_wt=64821
     Region          17..>94
                     /region_name="Tropomodulin"
                     /note="pfam03250"
                     /db_xref="CDD:460862"
     Region          <245..>384
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     CDS             1..568
                     /gene="LMOD3"
                     /coded_by="XM_041459873.1:160..1866"
                     /db_xref="GeneID:121349443"
ORIGIN      
        1 mnmselgqns dedvcpedid edeilanlsp eelkelqsem evmapdpeip tgmiqrdqte
       61 kpptgsfdhr slvdylywqk asrrmleder vpvtllpser saaeeiegea grsgevager
      121 mpeterkerh yqnehvsesr tqpgdtkkdr sdkervveed ekeaaeeeee ddeeeeeeen
      181 eteletkeny tnesshinqi sqkpgtepge ikekpkenek kisklnipqk laldtsfmkl
      241 sarpsgnqtn ledslekvrk nnpdvkelnl nnienvpkem lidfvnamkk nkniktfsla
      301 nvgaddnvaf alanmlrenr sittlnidsn fisgkgivai mrclqynetl telrfhnqrg
      361 llghqaemei arllkanntl lkmgyhfelp gprmvvtnll srnldkqrqk rqegqrqqqm
      421 keqkeliaml englglppgm wemlgvplpq lrmqeppqap kppvpaavsl skrqentrpp
      481 apeqpcrekp isfkvvklkk tqrkppvpey vepaektnlk dviktlkpvp rrrppplvei
      541 tprdqllndi rqsnvaylkp vplpkqle
//
LOCUS       XP_041315821             188 aa            linear   VRT 06-MAY-2021
DEFINITION  PRA1 family protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315821
VERSION     XP_041315821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="PRA1 family protein 3"
                     /calculated_mol_wt=21371
     Region          3..148
                     /region_name="PRA1"
                     /note="PRA1 family protein; pfam03208"
                     /db_xref="CDD:460846"
     CDS             1..188
                     /gene="ARL6IP5"
                     /coded_by="XM_041459887.1:151..717"
                     /db_xref="GeneID:121349445"
ORIGIN      
        1 mevqvaplra wddffpgsdr falpdlkdis kwnnrvvsnl lyyqtnylmv aaalvsivgf
       61 lsplnmligg tvvvlvflgf vwmshnkdvl rklkkqyptt fvlaimlssy flisylgdvm
      121 vfmfgitlpl llmfvhaslr lrniqnklqn kmegiglkkt pmgfildale qqedrinkla
      181 dyiskvke
//
LOCUS       XP_041315835             424 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315835
VERSION     XP_041315835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="inositol hexakisphosphate kinase 2"
                     /calculated_mol_wt=49214
     Region          202..416
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..424
                     /gene="IP6K2"
                     /coded_by="XM_041459901.1:255..1529"
                     /db_xref="GeneID:121349451"
ORIGIN      
        1 mspafgamev ehyskgvlle pfvhqvgghs cvlrfndkti ckpliqrehq fyetlptemr
       61 kftpqyegvv svsfeededg nlcliaypln gdhdnlenld nsdcepkskl lrwtnkktvl
      121 lenekiskew vrqhrkeekm kshkleeefe wlkksevlyy tvekkgnvss qfkhhnpwsm
      181 kchqqqlqrm kenakhrnqy kfillenlts ryevpcvldl kmgtrqhgdd aseekkanqi
      241 rkcqqstsav igvrvcgmqv yqagtgqlmf mnkyhgrkls vqgfkealyq ffhngkylrr
      301 elfesvikkl telksvlekq esyrfysssl liiydgkerq evavdsdped ledlseessd
      361 esagayaykp tastvdvrmi dfahttckyy gedsvvhegq dtgyvfglqn lidiikeird
      421 esse
//
LOCUS       XP_041315846             424 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315846
VERSION     XP_041315846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459912.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="inositol hexakisphosphate kinase 2"
                     /calculated_mol_wt=49214
     Region          202..416
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..424
                     /gene="IP6K2"
                     /coded_by="XM_041459912.1:194..1468"
                     /db_xref="GeneID:121349451"
ORIGIN      
        1 mspafgamev ehyskgvlle pfvhqvgghs cvlrfndkti ckpliqrehq fyetlptemr
       61 kftpqyegvv svsfeededg nlcliaypln gdhdnlenld nsdcepkskl lrwtnkktvl
      121 lenekiskew vrqhrkeekm kshkleeefe wlkksevlyy tvekkgnvss qfkhhnpwsm
      181 kchqqqlqrm kenakhrnqy kfillenlts ryevpcvldl kmgtrqhgdd aseekkanqi
      241 rkcqqstsav igvrvcgmqv yqagtgqlmf mnkyhgrkls vqgfkealyq ffhngkylrr
      301 elfesvikkl telksvlekq esyrfysssl liiydgkerq evavdsdped ledlseessd
      361 esagayaykp tastvdvrmi dfahttckyy gedsvvhegq dtgyvfglqn lidiikeird
      421 esse
//
LOCUS       XP_041315855             424 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315855
VERSION     XP_041315855.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459921.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="inositol hexakisphosphate kinase 2"
                     /calculated_mol_wt=49214
     Region          202..416
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..424
                     /gene="IP6K2"
                     /coded_by="XM_041459921.1:287..1561"
                     /db_xref="GeneID:121349451"
ORIGIN      
        1 mspafgamev ehyskgvlle pfvhqvgghs cvlrfndkti ckpliqrehq fyetlptemr
       61 kftpqyegvv svsfeededg nlcliaypln gdhdnlenld nsdcepkskl lrwtnkktvl
      121 lenekiskew vrqhrkeekm kshkleeefe wlkksevlyy tvekkgnvss qfkhhnpwsm
      181 kchqqqlqrm kenakhrnqy kfillenlts ryevpcvldl kmgtrqhgdd aseekkanqi
      241 rkcqqstsav igvrvcgmqv yqagtgqlmf mnkyhgrkls vqgfkealyq ffhngkylrr
      301 elfesvikkl telksvlekq esyrfysssl liiydgkerq evavdsdped ledlseessd
      361 esagayaykp tastvdvrmi dfahttckyy gedsvvhegq dtgyvfglqn lidiikeird
      421 esse
//
LOCUS       XP_041315864             424 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315864
VERSION     XP_041315864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="inositol hexakisphosphate kinase 2"
                     /calculated_mol_wt=49214
     Region          202..416
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..424
                     /gene="IP6K2"
                     /coded_by="XM_041459930.1:226..1500"
                     /db_xref="GeneID:121349451"
ORIGIN      
        1 mspafgamev ehyskgvlle pfvhqvgghs cvlrfndkti ckpliqrehq fyetlptemr
       61 kftpqyegvv svsfeededg nlcliaypln gdhdnlenld nsdcepkskl lrwtnkktvl
      121 lenekiskew vrqhrkeekm kshkleeefe wlkksevlyy tvekkgnvss qfkhhnpwsm
      181 kchqqqlqrm kenakhrnqy kfillenlts ryevpcvldl kmgtrqhgdd aseekkanqi
      241 rkcqqstsav igvrvcgmqv yqagtgqlmf mnkyhgrkls vqgfkealyq ffhngkylrr
      301 elfesvikkl telksvlekq esyrfysssl liiydgkerq evavdsdped ledlseessd
      361 esagayaykp tastvdvrmi dfahttckyy gedsvvhegq dtgyvfglqn lidiikeird
      421 esse
//
LOCUS       XP_041315872             424 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315872
VERSION     XP_041315872.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459938.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="inositol hexakisphosphate kinase 2"
                     /calculated_mol_wt=49214
     Region          202..416
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..424
                     /gene="IP6K2"
                     /coded_by="XM_041459938.1:242..1516"
                     /db_xref="GeneID:121349451"
ORIGIN      
        1 mspafgamev ehyskgvlle pfvhqvgghs cvlrfndkti ckpliqrehq fyetlptemr
       61 kftpqyegvv svsfeededg nlcliaypln gdhdnlenld nsdcepkskl lrwtnkktvl
      121 lenekiskew vrqhrkeekm kshkleeefe wlkksevlyy tvekkgnvss qfkhhnpwsm
      181 kchqqqlqrm kenakhrnqy kfillenlts ryevpcvldl kmgtrqhgdd aseekkanqi
      241 rkcqqstsav igvrvcgmqv yqagtgqlmf mnkyhgrkls vqgfkealyq ffhngkylrr
      301 elfesvikkl telksvlekq esyrfysssl liiydgkerq evavdsdped ledlseessd
      361 esagayaykp tastvdvrmi dfahttckyy gedsvvhegq dtgyvfglqn lidiikeird
      421 esse
//
LOCUS       XP_041315887             422 aa            linear   VRT 06-MAY-2021
DEFINITION  twinfilin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315887
VERSION     XP_041315887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="twinfilin-2"
                     /calculated_mol_wt=47764
     Region          80..215
                     /region_name="ADF_Twf-N_like"
                     /note="N-terminal ADF domain of twinfilin and related
                     proteins; cd11285"
                     /db_xref="CDD:200441"
     Region          249..384
                     /region_name="ADF_Twf-C_like"
                     /note="C-terminal ADF domain of twinfilin and related
                     proteins; cd11284"
                     /db_xref="CDD:200440"
     Site            order(249..253,283,330,332,335,339..340,342..344,346..347,
                     349,367,369,371)
                     /site_type="other"
                     /note="G-actin binding interface [polypeptide binding]"
                     /db_xref="CDD:200440"
     Site            order(340,372,375)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200440"
     CDS             1..422
                     /gene="TWF2"
                     /coded_by="XM_041459953.1:6..1274"
                     /db_xref="GeneID:121349470"
ORIGIN      
        1 mqfcvcamev hhprvpklas gtwrhleagl rplkptglwl cwrkhegsha lglsrstldv
       61 aqfgfvsglf vpgfsrnpcl eattelrdff akarngsvrl ikviiedeql vlgahkelsr
      121 rwdadydslv lplldeqqpc yvlyrldsqn aqgyewlfis wspdsspvrl kmlyaatrat
      181 vkkefggghi kdemfgtvke dvslsgyqkh vsscsapapl taaeqelqqi rinevkteis
      241 veskhqtlqg lafplqldaq qaiqalkqkk inyiqlkldl eretidlvht spteisdlpk
      301 ripqdsaryh fflykhsheg dylesvvfiy smpgykcsik ermlysscks rlldtveqef
      361 cleiakkiei ddgaeltaef lyeevhpkqh afkqafakpk gpvgkrgqkr likgpgenge
      421 ds
//
LOCUS       XP_041315900            2622 aa            linear   VRT 06-MAY-2021
DEFINITION  filamin-B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041315900
VERSION     XP_041315900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2622
                     /product="filamin-B isoform X1"
                     /calculated_mol_wt=280307
     Region          20..150
                     /region_name="CH_FLNB_rpt1"
                     /note="first calponin homology (CH) domain found in
                     filamin-B (FLN-B) and similar proteins; cd21309"
                     /db_xref="CDD:409158"
     Site            order(22..27,33..34,37,41,83..86,91..94,96..97,100..101,
                     103,112..120,125,127..128,130..131,134..135,138)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409158"
     Region          152..261
                     /region_name="CH_FLNB_rpt2"
                     /note="second calponin homology (CH) domain found in
                     filamin-B (FLN-B) and similar proteins; cd21313"
                     /db_xref="CDD:409162"
     Site            order(160,164,212,214..215,218..219,221,230..238,245,
                     247..248,250..251,254..255,258)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409162"
     Region          273..369
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          373..468
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..564
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          568..658
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          664..758
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          761..861
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          864..960
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          964..1056
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1059..1149
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1153..1244
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1248..1344
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1347..1436
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1440..1533
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1536..1630
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1633..1726
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <1777..1836
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1844..1930
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2022..2111
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <2147..2207
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2213..2303
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2307..2398
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2404..2493
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2532..2621
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     CDS             1..2622
                     /gene="FLNB"
                     /coded_by="XM_041459966.1:298..8166"
                     /db_xref="GeneID:121349476"
ORIGIN      
        1 mstqargqga rraadpdgem patekdlaed apwkriqqnt ftrwcnehlr cvnkrignlq
       61 hdlsdglrli allevlsqkr myrkyhqrpt frqmqlenvs valefleres iklvsidska
      121 ivdgnlklil gliwtlilhy sismpvwede gdddakkqtp kqrllgwiqn kipylpitnf
      181 nqnwqdgkal galvdscapg lcpdwetwdp kkpvdnarea mqqaddwlgv pqvitpeeii
      241 hpdvdehsvm tylsqfpkak lkpgaplkpk lnpkkarayg rgiephgnmv kqpaiftvdt
      301 isagqgdlmv fiedpegnre eakitpssdk nktysvqyvp rvtgphkvsv lfagqhisks
      361 pfevnvdkaq gdaskvtakg pgleaagnia nkstyfdlyt agagvgdviv evedpqgrsl
      421 aevvvedkgn qvyrctykpv qagphivkvt fageaipktp ctvlvgeacn pnacratgrg
      481 lqpkgvrire tadfkvdtra agsgdlgvti kgpkgleelv kqkgfmdgiy tfeyypatpg
      541 kyvvtitwgg qnipkspfev qvgheagpqk vrawgpglhe gvvgksadfv vesigtevgs
      601 lgfaiegpsq akiecddknd gscdvkywpk epgeyavhim cddedikdsp ymafirpasg
      661 dfnadkvkay gpglertgci vnnpaeftve tkdagkaplk myaqdgegnp idiqikskpd
      721 gvfacsyvpv kpikhtisvv wgganvpnsp frvligqgsh pqkvkvfgpg vertglkase
      781 pthftvdctd agegdvsvgi kcdarvvsse eedidfdiih nandtftvky sppaagryti
      841 kvlfageeip aspfrvkvdp shdaskvkae gpglnktgve ngkpthftvf tkgagkapld
      901 vqfsssvpge avmdldiidn ydyshtiryt piqqgpmkvl vtyggdpipk spftvgvaap
      961 ldlskvivng lenrvevgkd qefvidtkga ggqgklevni sspmrkavpc lvepvlgkec
     1021 stakyipree glyvvdvsyd gnpipgspyt veatlppdps kvkahgpglr gglvgkpaqf
     1081 tidtkgagtg glgltvegpc eakiecsdng dgtcsvsylp tkpgeyfvni lfeevhipgs
     1141 pfkadiempf dvskviatgp glergkvgea gllnvdctea gpgdlrvdmv sdtgskaevr
     1201 iddnkdgtyv ityvplsagm ytikmrygge qvpkfparvk vepavdtsrv kvfgpgvegk
     1261 dvfreattef tvdarpltka ggdhirtqit spsgsptdcl iqdnadgtys veytpfekgp
     1321 htvsvtydgv pvpnspfrvn vtegchpsrv kaqgpgltea ftnqpnafsv vtrgagiggl
     1381 gitvegpses kisckdnkdg scsaeyipyv pgdydvnity ggehipgspf kvpvkdvvdp
     1441 skvkiagpgl gtavrakipq sftvdtskag iaplevvvtg prgvvgpvnv vdngdgthtv
     1501 vytpmqegpy mitvkyadee iprspfkvkv lptydaskvt asgpglssyg ilaslpvefa
     1561 vdakdagqgl lavqitdqeg kpkrvdihdn kdgtytvtyv pdktgrytig vkyggddipa
     1621 spyriraspa gdaskclatg pgiaptvktg eevgfvvdak sagkgkvtct vltpdgteae
     1681 advvenedgt ydifytaakp gtyviyvrfg gvdipnspft vmavdaddva aqsqepvgas
     1741 spgfhpwvte eayvpvgdmn gmgfrpfdmv ipfavrkgei tgevhmpsgk mdtpdivdnk
     1801 dgtvtvkyap tevglhemhi kymgnhipes plqfyvnypn sgsvsaygpg liygiankpa
     1861 tftivtedag eggldlaieg pskaeiscid nkdgtctvty lptlpgnysi lvkyndkhip
     1921 gspftakitd dnrrrsqvkl gsaadfmldi netdlsllta sikapsgrde pcllkrlpnn
     1981 higisfipre vgehlvsikk ngshvpnspv timvvqseig darrarvfgr glvegrtfem
     2041 cdfivdtrda gyggislave gpskveiqte dledgtckvs yfptvpgvyi vstkfadehi
     2101 pgspfsvkis gegrvkesit rtrrapsvat vgsicdlnlk ipeidcadmt aqvtspsgrn
     2161 fdaeivecdk ntycvrfvpq emgvhtvdvk ykgqpvpgsp fqftvgplge ggahkvragg
     2221 pglergetgv paefsiwtre agagglsiav egpskaeitf ddhkdgscga syivqepgny
     2281 evsikfndeh ipespylvpv iapsddarrl tvtslqesgl kvnqpasfai rlngakgkid
     2341 akvhspsgav eechvselep dkyavrfiph engvhsidvk fngshvvgsp fkvrvgepgq
     2401 agnpalvtay gsgleggttg lqseffintt kagpgtlsvt iegpskvkmd cqetpegykv
     2461 mytpmapgny ligvkyggpn hivgspfkak vtgqrlvspg sanetssilv esvtrsstet
     2521 cysaipksts daskvvsrga glskafvgqk ssfsvdcska gsnmllvgvh gptipceevs
     2581 ikhlgshqyn vtyvvkergd yvlavkwgde hipgspfhvt vp
//
LOCUS       XP_041315907            2597 aa            linear   VRT 06-MAY-2021
DEFINITION  filamin-B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315907
VERSION     XP_041315907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459973.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2597
                     /product="filamin-B isoform X2"
                     /calculated_mol_wt=277786
     Region          20..150
                     /region_name="CH_FLNB_rpt1"
                     /note="first calponin homology (CH) domain found in
                     filamin-B (FLN-B) and similar proteins; cd21309"
                     /db_xref="CDD:409158"
     Site            order(22..27,33..34,37,41,83..86,91..94,96..97,100..101,
                     103,112..120,125,127..128,130..131,134..135,138)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409158"
     Region          152..261
                     /region_name="CH_FLNB_rpt2"
                     /note="second calponin homology (CH) domain found in
                     filamin-B (FLN-B) and similar proteins; cd21313"
                     /db_xref="CDD:409162"
     Site            order(160,164,212,214..215,218..219,221,230..238,245,
                     247..248,250..251,254..255,258)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409162"
     Region          273..369
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          373..468
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..564
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          568..658
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          664..758
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          761..861
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          864..960
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          964..1056
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1059..1149
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1153..1244
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1248..1344
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1347..1436
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1440..1533
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1536..1630
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1633..1725
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <1752..1811
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1819..1905
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1997..2086
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <2122..2182
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2188..2278
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2282..2373
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2379..2468
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2507..2596
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     CDS             1..2597
                     /gene="FLNB"
                     /coded_by="XM_041459973.1:299..8092"
                     /db_xref="GeneID:121349476"
ORIGIN      
        1 mstqargqga rraadpdgem patekdlaed apwkriqqnt ftrwcnehlr cvnkrignlq
       61 hdlsdglrli allevlsqkr myrkyhqrpt frqmqlenvs valefleres iklvsidska
      121 ivdgnlklil gliwtlilhy sismpvwede gdddakkqtp kqrllgwiqn kipylpitnf
      181 nqnwqdgkal galvdscapg lcpdwetwdp kkpvdnarea mqqaddwlgv pqvitpeeii
      241 hpdvdehsvm tylsqfpkak lkpgaplkpk lnpkkarayg rgiephgnmv kqpaiftvdt
      301 isagqgdlmv fiedpegnre eakitpssdk nktysvqyvp rvtgphkvsv lfagqhisks
      361 pfevnvdkaq gdaskvtakg pgleaagnia nkstyfdlyt agagvgdviv evedpqgrsl
      421 aevvvedkgn qvyrctykpv qagphivkvt fageaipktp ctvlvgeacn pnacratgrg
      481 lqpkgvrire tadfkvdtra agsgdlgvti kgpkgleelv kqkgfmdgiy tfeyypatpg
      541 kyvvtitwgg qnipkspfev qvgheagpqk vrawgpglhe gvvgksadfv vesigtevgs
      601 lgfaiegpsq akiecddknd gscdvkywpk epgeyavhim cddedikdsp ymafirpasg
      661 dfnadkvkay gpglertgci vnnpaeftve tkdagkaplk myaqdgegnp idiqikskpd
      721 gvfacsyvpv kpikhtisvv wgganvpnsp frvligqgsh pqkvkvfgpg vertglkase
      781 pthftvdctd agegdvsvgi kcdarvvsse eedidfdiih nandtftvky sppaagryti
      841 kvlfageeip aspfrvkvdp shdaskvkae gpglnktgve ngkpthftvf tkgagkapld
      901 vqfsssvpge avmdldiidn ydyshtiryt piqqgpmkvl vtyggdpipk spftvgvaap
      961 ldlskvivng lenrvevgkd qefvidtkga ggqgklevni sspmrkavpc lvepvlgkec
     1021 stakyipree glyvvdvsyd gnpipgspyt veatlppdps kvkahgpglr gglvgkpaqf
     1081 tidtkgagtg glgltvegpc eakiecsdng dgtcsvsylp tkpgeyfvni lfeevhipgs
     1141 pfkadiempf dvskviatgp glergkvgea gllnvdctea gpgdlrvdmv sdtgskaevr
     1201 iddnkdgtyv ityvplsagm ytikmrygge qvpkfparvk vepavdtsrv kvfgpgvegk
     1261 dvfreattef tvdarpltka ggdhirtqit spsgsptdcl iqdnadgtys veytpfekgp
     1321 htvsvtydgv pvpnspfrvn vtegchpsrv kaqgpgltea ftnqpnafsv vtrgagiggl
     1381 gitvegpses kisckdnkdg scsaeyipyv pgdydvnity ggehipgspf kvpvkdvvdp
     1441 skvkiagpgl gtavrakipq sftvdtskag iaplevvvtg prgvvgpvnv vdngdgthtv
     1501 vytpmqegpy mitvkyadee iprspfkvkv lptydaskvt asgpglssyg ilaslpvefa
     1561 vdakdagqgl lavqitdqeg kpkrvdihdn kdgtytvtyv pdktgrytig vkyggddipa
     1621 spyriraspa gdaskclatg pgiaptvktg eevgfvvdak sagkgkvtct vltpdgteae
     1681 advvenedgt ydifytaakp gtyviyvrfg gvdipnspft vmvteeayvp vgdmngmgfr
     1741 pfdmvipfav rkgeitgevh mpsgkmdtpd ivdnkdgtvt vkyaptevgl hemhikymgn
     1801 hipesplqfy vnypnsgsvs aygpgliygi ankpatftiv tedageggld laiegpskae
     1861 iscidnkdgt ctvtylptlp gnysilvkyn dkhipgspft akitddnrrr sqvklgsaad
     1921 fmldinetdl slltasikap sgrdepcllk rlpnnhigis fiprevgehl vsikkngshv
     1981 pnspvtimvv qseigdarra rvfgrglveg rtfemcdfiv dtrdagyggi slavegpskv
     2041 eiqtedledg tckvsyfptv pgvyivstkf adehipgspf svkisgegrv kesitrtrra
     2101 psvatvgsic dlnlkipeid cadmtaqvts psgrnfdaei vecdkntycv rfvpqemgvh
     2161 tvdvkykgqp vpgspfqftv gplgeggahk vraggpgler getgvpaefs iwtreagagg
     2221 lsiavegpsk aeitfddhkd gscgasyivq epgnyevsik fndehipesp ylvpviapsd
     2281 darrltvtsl qesglkvnqp asfairlnga kgkidakvhs psgaveechv selepdkyav
     2341 rfiphengvh sidvkfngsh vvgspfkvrv gepgqagnpa lvtaygsgle ggttglqsef
     2401 finttkagpg tlsvtiegps kvkmdcqetp egykvmytpm apgnyligvk yggpnhivgs
     2461 pfkakvtgqr lvspgsanet ssilvesvtr sstetcysai pkstsdaskv vsrgaglska
     2521 fvgqkssfsv dcskagsnml lvgvhgptip ceevsikhlg shqynvtyvv kergdyvlav
     2581 kwgdehipgs pfhvtvp
//
LOCUS       XP_041315917            2549 aa            linear   VRT 06-MAY-2021
DEFINITION  filamin-B isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315917
VERSION     XP_041315917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459983.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2549
                     /product="filamin-B isoform X3"
                     /calculated_mol_wt=272545
     Region          20..150
                     /region_name="CH_FLNB_rpt1"
                     /note="first calponin homology (CH) domain found in
                     filamin-B (FLN-B) and similar proteins; cd21309"
                     /db_xref="CDD:409158"
     Site            order(22..27,33..34,37,41,83..86,91..94,96..97,100..101,
                     103,112..120,125,127..128,130..131,134..135,138)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409158"
     Region          152..261
                     /region_name="CH_FLNB_rpt2"
                     /note="second calponin homology (CH) domain found in
                     filamin-B (FLN-B) and similar proteins; cd21313"
                     /db_xref="CDD:409162"
     Site            order(160,164,212,214..215,218..219,221,230..238,245,
                     247..248,250..251,254..255,258)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409162"
     Region          273..369
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          373..468
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..564
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          568..658
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          664..758
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          761..861
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          864..960
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          964..1056
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1059..1149
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1153..1244
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1248..1344
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1347..1436
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1440..1533
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1536..1630
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1633..1726
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <1777..1836
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1844..1930
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2022..2111
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <2147..2207
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2213..2303
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2307..2398
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2459..2548
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     CDS             1..2549
                     /gene="FLNB"
                     /coded_by="XM_041459983.1:299..7948"
                     /db_xref="GeneID:121349476"
ORIGIN      
        1 mstqargqga rraadpdgem patekdlaed apwkriqqnt ftrwcnehlr cvnkrignlq
       61 hdlsdglrli allevlsqkr myrkyhqrpt frqmqlenvs valefleres iklvsidska
      121 ivdgnlklil gliwtlilhy sismpvwede gdddakkqtp kqrllgwiqn kipylpitnf
      181 nqnwqdgkal galvdscapg lcpdwetwdp kkpvdnarea mqqaddwlgv pqvitpeeii
      241 hpdvdehsvm tylsqfpkak lkpgaplkpk lnpkkarayg rgiephgnmv kqpaiftvdt
      301 isagqgdlmv fiedpegnre eakitpssdk nktysvqyvp rvtgphkvsv lfagqhisks
      361 pfevnvdkaq gdaskvtakg pgleaagnia nkstyfdlyt agagvgdviv evedpqgrsl
      421 aevvvedkgn qvyrctykpv qagphivkvt fageaipktp ctvlvgeacn pnacratgrg
      481 lqpkgvrire tadfkvdtra agsgdlgvti kgpkgleelv kqkgfmdgiy tfeyypatpg
      541 kyvvtitwgg qnipkspfev qvgheagpqk vrawgpglhe gvvgksadfv vesigtevgs
      601 lgfaiegpsq akiecddknd gscdvkywpk epgeyavhim cddedikdsp ymafirpasg
      661 dfnadkvkay gpglertgci vnnpaeftve tkdagkaplk myaqdgegnp idiqikskpd
      721 gvfacsyvpv kpikhtisvv wgganvpnsp frvligqgsh pqkvkvfgpg vertglkase
      781 pthftvdctd agegdvsvgi kcdarvvsse eedidfdiih nandtftvky sppaagryti
      841 kvlfageeip aspfrvkvdp shdaskvkae gpglnktgve ngkpthftvf tkgagkapld
      901 vqfsssvpge avmdldiidn ydyshtiryt piqqgpmkvl vtyggdpipk spftvgvaap
      961 ldlskvivng lenrvevgkd qefvidtkga ggqgklevni sspmrkavpc lvepvlgkec
     1021 stakyipree glyvvdvsyd gnpipgspyt veatlppdps kvkahgpglr gglvgkpaqf
     1081 tidtkgagtg glgltvegpc eakiecsdng dgtcsvsylp tkpgeyfvni lfeevhipgs
     1141 pfkadiempf dvskviatgp glergkvgea gllnvdctea gpgdlrvdmv sdtgskaevr
     1201 iddnkdgtyv ityvplsagm ytikmrygge qvpkfparvk vepavdtsrv kvfgpgvegk
     1261 dvfreattef tvdarpltka ggdhirtqit spsgsptdcl iqdnadgtys veytpfekgp
     1321 htvsvtydgv pvpnspfrvn vtegchpsrv kaqgpgltea ftnqpnafsv vtrgagiggl
     1381 gitvegpses kisckdnkdg scsaeyipyv pgdydvnity ggehipgspf kvpvkdvvdp
     1441 skvkiagpgl gtavrakipq sftvdtskag iaplevvvtg prgvvgpvnv vdngdgthtv
     1501 vytpmqegpy mitvkyadee iprspfkvkv lptydaskvt asgpglssyg ilaslpvefa
     1561 vdakdagqgl lavqitdqeg kpkrvdihdn kdgtytvtyv pdktgrytig vkyggddipa
     1621 spyriraspa gdaskclatg pgiaptvktg eevgfvvdak sagkgkvtct vltpdgteae
     1681 advvenedgt ydifytaakp gtyviyvrfg gvdipnspft vmavdaddva aqsqepvgas
     1741 spgfhpwvte eayvpvgdmn gmgfrpfdmv ipfavrkgei tgevhmpsgk mdtpdivdnk
     1801 dgtvtvkyap tevglhemhi kymgnhipes plqfyvnypn sgsvsaygpg liygiankpa
     1861 tftivtedag eggldlaieg pskaeiscid nkdgtctvty lptlpgnysi lvkyndkhip
     1921 gspftakitd dnrrrsqvkl gsaadfmldi netdlsllta sikapsgrde pcllkrlpnn
     1981 higisfipre vgehlvsikk ngshvpnspv timvvqseig darrarvfgr glvegrtfem
     2041 cdfivdtrda gyggislave gpskveiqte dledgtckvs yfptvpgvyi vstkfadehi
     2101 pgspfsvkis gegrvkesit rtrrapsvat vgsicdlnlk ipeidcadmt aqvtspsgrn
     2161 fdaeivecdk ntycvrfvpq emgvhtvdvk ykgqpvpgsp fqftvgplge ggahkvragg
     2221 pglergetgv paefsiwtre agagglsiav egpskaeitf ddhkdgscga syivqepgny
     2281 evsikfndeh ipespylvpv iapsddarrl tvtslqesgl kvnqpasfai rlngakgkid
     2341 akvhspsgav eechvselep dkyavrfiph engvhsidvk fngshvvgsp fkvrvgepgq
     2401 agnpalvtay gsgleggttg qrlvspgsan etssilvesv trsstetcys aipkstsdas
     2461 kvvsrgagls kafvgqkssf svdcskagsn mllvgvhgpt ipceevsikh lgshqynvty
     2521 vvkergdyvl avkwgdehip gspfhvtvp
//
LOCUS       XP_041315930            1418 aa            linear   VRT 06-MAY-2021
DEFINITION  nischarin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041315930
VERSION     XP_041315930.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041459996.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1418
                     /product="nischarin isoform X1"
                     /calculated_mol_wt=159171
     Region          12..127
                     /region_name="PX_IRAS"
                     /note="The phosphoinositide binding Phox Homology domain
                     of the Imidazoline Receptor Antisera-Selected; cd06875"
                     /db_xref="CDD:132785"
     Site            order(47..49,72..73,86)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132785"
     Region          <274..>416
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          288..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..355
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          356..377
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          378..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1418
                     /gene="NISCH"
                     /coded_by="XM_041459996.1:165..4421"
                     /db_xref="GeneID:121349492"
ORIGIN      
        1 meaaaggedg eepprearvl gselvetytv yiiqvsvgnh qwtvkhrysd fhdlheklvs
       61 ekkidknllp pkkiigknsk slvekrqkel eiylqtlllk fpvtapkvls hflhfhlyei
      121 ngitaalaee lfhkgeqllm agevftirpl qlyavtqqll qgkptcangd aktdlghild
      181 ftcrlkylkv tgtggpfgts niqehllpfd lsifkslhqi eishcggkli kgltsskhal
      241 atlsvrfsat smkeilvpea sefdqweped aldsscpvta iiptwrtltt ldmshnsise
      301 iddsvklipk iefldlshng vslvenlqhl ynlvhldlsy nkltslegvh tklgniktln
      361 lagnqlerlc glnklyslvn ldlsnnkieq idevknignl pclekvmlss nplsiipdyr
      421 tkvlaqfgdr asevcldniv ttekeldtve vlkaiqkake vkyklsnsdk kisedsrlta
      481 assksncssl tvrpsspslp rpvsssqeii ceetvlassf lqssgstptd htvpqrcfei
      541 pdsrckiqap asllasckey ggdhhvcler ehcavpdpcn tiilpfncms ytatnqdfvq
      601 hlsasivqav qksspslpen kgspggnstt tdkadgyfem glhegdqtfe fsttldaqss
      661 dniavesvdi vkilwsfsih ihkelrqfas clvltdemla vfeiphqelr gncqhlpsal
      721 kltlcfpytd liefgfllpe icltlklkns dhclfivsds qnlqdfyscl qtccsqhyts
      781 vlpsstwycr kanlqeflcq lmelncisae dveikgcfpt ylvygnktnv qkvlhqpesa
      841 gnnkewsknv lcsalyssvy kssdqsscvv hpcwifltpq hlyivkvdfs llpgkwvgte
      901 elgsvfklnr iplaslvlhp ahsatqqkgs fldghvlell vgyrfvtavf vlphekfhfl
      961 riysllrtll qdvktiiifk assksdavrn haveanrhgq aasfckphlt lsslypsell
     1021 mqkitednqi pvhlhvsvsl qyvaglkgra lveffhsnia eveneelrhl mwssvlfykt
     1081 psvevmacvl lstkaiyfll ddsfihadeh qsdfwnkens dcenstfhls ccfvlklndl
     1141 qsvnvglfdq yfritghsag hivtcltrds ynthtfiqql mavlsllart pspepvdkdf
     1201 ysefgskntg kmenyelihs srvkfiypne eeigdlaflv aekmdgltnl pslnillyvl
     1261 afqvnhfegs aqntsslqpk tliltssdlf lfdedyisyp lpefakeppk rdkyqladgr
     1321 rirdldrvlm gyqtypqalt fvfddvqnqd lmqnltldhf getdsvpkgn skqegsrnre
     1381 iqwyifipsa esreklisll arqweilcgr elpleltg
//
LOCUS       XP_041315936            1279 aa            linear   VRT 06-MAY-2021
DEFINITION  nischarin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041315936
VERSION     XP_041315936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1279
                     /product="nischarin isoform X2"
                     /calculated_mol_wt=143291
     Region          <135..>277
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          149..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..193
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          194..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          217..238
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          239..263
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..1279
                     /gene="NISCH"
                     /coded_by="XM_041460002.1:322..4161"
                     /db_xref="GeneID:121349492"
ORIGIN      
        1 magevftirp lqlyavtqql lqgkptcang daktdlghil dftcrlkylk vtgtggpfgt
       61 sniqehllpf dlsifkslhq ieishcggkl ikgltsskha latlsvrfsa tsmkeilvpe
      121 asefdqwepe daldsscpvt aiiptwrtlt tldmshnsis eiddsvklip kiefldlshn
      181 gvslvenlqh lynlvhldls ynkltslegv htklgniktl nlagnqlerl cglnklyslv
      241 nldlsnnkie qidevknign lpclekvmls snplsiipdy rtkvlaqfgd rasevcldni
      301 vttekeldtv evlkaiqkak evkyklsnsd kkisedsrlt aassksncss ltvrpsspsl
      361 prpvsssqei iceetvlass flqssgstpt dhtvpqrcfe ipdsrckiqa pasllascke
      421 yggdhhvcle rehcavpdpc ntiilpfncm sytatnqdfv qhlsasivqa vqksspslpe
      481 nkgspggnst ttdkadgyfe mglhegdqtf efsttldaqs sdniavesvd ivkilwsfsi
      541 hihkelrqfa sclvltdeml avfeiphqel rgncqhlpsa lkltlcfpyt dliefgfllp
      601 eicltlklkn sdhclfivsd sqnlqdfysc lqtccsqhyt svlpsstwyc rkanlqeflc
      661 qlmelncisa edveikgcfp tylvygnktn vqkvlhqpes agnnkewskn vlcsalyssv
      721 ykssdqsscv vhpcwifltp qhlyivkvdf sllpgkwvgt eelgsvfkln riplaslvlh
      781 pahsatqqkg sfldghvlel lvgyrfvtav fvlphekfhf lriysllrtl lqdvktiiif
      841 kassksdavr nhaveanrhg qaasfckphl tlsslypsel lmqkitednq ipvhlhvsvs
      901 lqyvaglkgr alveffhsni aeveneelrh lmwssvlfyk tpsvevmacv llstkaiyfl
      961 lddsfihade hqsdfwnken sdcenstfhl sccfvlklnd lqsvnvglfd qyfritghsa
     1021 ghivtcltrd synthtfiqq lmavlsllar tpspepvdkd fysefgsknt gkmenyelih
     1081 ssrvkfiypn eeeigdlafl vaekmdgltn lpslnillyv lafqvnhfeg saqntsslqp
     1141 ktliltssdl flfdedyisy plpefakepp krdkyqladg rrirdldrvl mgyqtypqal
     1201 tfvfddvqnq dlmqnltldh fgetdsvpkg nskqegsrnr eiqwyifips aesreklisl
     1261 larqweilcg relpleltg
//
LOCUS       XP_041315945             566 aa            linear   VRT 06-MAY-2021
DEFINITION  nischarin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041315945
VERSION     XP_041315945.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460011.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..566
                     /product="nischarin isoform X3"
                     /calculated_mol_wt=62609
     Region          12..127
                     /region_name="PX_IRAS"
                     /note="The phosphoinositide binding Phox Homology domain
                     of the Imidazoline Receptor Antisera-Selected; cd06875"
                     /db_xref="CDD:132785"
     Site            order(47..49,72..73,86)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132785"
     Region          <274..>416
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          288..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..355
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          356..377
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          378..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..566
                     /gene="NISCH"
                     /coded_by="XM_041460011.1:169..1869"
                     /db_xref="GeneID:121349492"
ORIGIN      
        1 meaaaggedg eepprearvl gselvetytv yiiqvsvgnh qwtvkhrysd fhdlheklvs
       61 ekkidknllp pkkiigknsk slvekrqkel eiylqtlllk fpvtapkvls hflhfhlyei
      121 ngitaalaee lfhkgeqllm agevftirpl qlyavtqqll qgkptcangd aktdlghild
      181 ftcrlkylkv tgtggpfgts niqehllpfd lsifkslhqi eishcggkli kgltsskhal
      241 atlsvrfsat smkeilvpea sefdqweped aldsscpvta iiptwrtltt ldmshnsise
      301 iddsvklipk iefldlshng vslvenlqhl ynlvhldlsy nkltslegvh tklgniktln
      361 lagnqlerlc glnklyslvn ldlsnnkieq idevknignl pclekvmlss nplsiipdyr
      421 tkvlaqfgdr asevcldniv ttekeldtve vlkaiqkake vkyklsnsdk kisedsrlta
      481 assksncssl tvrpsspslp rpvsssqeii ceetvlassf lqssgstptd htvpqrcfei
      541 pdsrckiqap asllasckey ggdhhv
//
LOCUS       XP_041315965             582 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent creatine transporter 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315965
VERSION     XP_041315965.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460031.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="sodium- and chloride-dependent creatine
                     transporter 1"
                     /calculated_mol_wt=64928
     Region          1..582
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(9,12,363,366..367)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..582
                     /gene="SLC6A8"
                     /coded_by="XM_041460031.1:96..1844"
                     /db_xref="GeneID:121349511"
ORIGIN      
        1 mdfimscvgf avglgnvwrf pylcyknggg vflipylliv fvggipiffl evalgqfmkq
       61 ggiaawniap lfkglglasm vivffcnsyy imilvwglfy lvhsltdtlp watcghswnt
      121 eqctelfnld lcqnvstnat astwasnfsc tnmtnkrspv iefwenkvlr lsgglsepge
      181 mnwqmilcll ttwivvyfci wkgvkstgki vyftalfpyv vlilllvhgv tlpgalggii
      241 yylkpdwskl veaqvwidag tqvffsyaig lgaltalgsy nrfhnncyrd ayilavinsc
      301 tsffagfvvf svlgfmaseq gvdismvaes gpglafiayp kavtlmplsp lwatlffiml
      361 lvlgldsqfv gvegfitgil dlfpqpgags lrreltaalc ciicclidls mvtqggmyvf
      421 qlfdnysasg itllwqafwe cvviawvyga drfmddvarm igyrplpvmk wcwavvtplv
      481 cvgifvfhvv nykpltynkt yvypwwgeai gwvlalssml cipctviykl lrckgslrer
      541 wqllttpiwg qhhleyltpe aeakllapep pkekatlfet vi
//
LOCUS       XP_041315974             582 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent creatine transporter 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315974
VERSION     XP_041315974.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460040.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="sodium- and chloride-dependent creatine
                     transporter 1"
                     /calculated_mol_wt=64928
     Region          1..582
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(9,12,363,366..367)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..582
                     /gene="SLC6A8"
                     /coded_by="XM_041460040.1:196..1944"
                     /db_xref="GeneID:121349511"
ORIGIN      
        1 mdfimscvgf avglgnvwrf pylcyknggg vflipylliv fvggipiffl evalgqfmkq
       61 ggiaawniap lfkglglasm vivffcnsyy imilvwglfy lvhsltdtlp watcghswnt
      121 eqctelfnld lcqnvstnat astwasnfsc tnmtnkrspv iefwenkvlr lsgglsepge
      181 mnwqmilcll ttwivvyfci wkgvkstgki vyftalfpyv vlilllvhgv tlpgalggii
      241 yylkpdwskl veaqvwidag tqvffsyaig lgaltalgsy nrfhnncyrd ayilavinsc
      301 tsffagfvvf svlgfmaseq gvdismvaes gpglafiayp kavtlmplsp lwatlffiml
      361 lvlgldsqfv gvegfitgil dlfpqpgags lrreltaalc ciicclidls mvtqggmyvf
      421 qlfdnysasg itllwqafwe cvviawvyga drfmddvarm igyrplpvmk wcwavvtplv
      481 cvgifvfhvv nykpltynkt yvypwwgeai gwvlalssml cipctviykl lrckgslrer
      541 wqllttpiwg qhhleyltpe aeakllapep pkekatlfet vi
//
LOCUS       XP_041315986             352 aa            linear   VRT 06-MAY-2021
DEFINITION  epidermal differentiation-specific protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041315986
VERSION     XP_041315986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="epidermal differentiation-specific protein-like"
                     /calculated_mol_wt=39591
     Region          3..80
                     /region_name="XTALbg"
                     /note="Beta/gamma crystallins; smart00247"
                     /db_xref="CDD:214583"
     Region          88..169
                     /region_name="XTALbg"
                     /note="Beta/gamma crystallins; smart00247"
                     /db_xref="CDD:214583"
     Region          192..328
                     /region_name="PFM_EP37-like"
                     /note="pore-forming module of Cynops pyrrhogaster EP37,
                     and similar aerolysin-type beta-barrel pore-forming
                     proteins; cd20230"
                     /db_xref="CDD:380800"
     Region          223..266
                     /region_name="putative membrane-spanning region"
                     /note="putative membrane-spanning region [structural
                     motif]"
                     /db_xref="CDD:380800"
     Region          287..305
                     /region_name="putative variable loop region"
                     /note="putative variable loop region [structural motif]"
                     /db_xref="CDD:380800"
     CDS             1..352
                     /gene="LOC121349519"
                     /coded_by="XM_041460052.1:1308..2366"
                     /db_xref="GeneID:121349519"
ORIGIN      
        1 mnritvyera nfeglsreft cdvpdlheld fgnciaslkv egqpwiaytd pkyegephaf
       61 eegeypsvdr pnsfsalrlv hhdlgdpqit lyehpnfqga ckvvteetnl aygyfndrva
      121 shmvqrgvwl lyqhpgrggw hclawpgehl adyklelnfq srlshlrplr pgrplvsarl
      181 lweqkrveee revlvdeieg vneteseqal aasssreygt tlwqsfhfsn atslkaglsf
      241 tltveasnif tvqkgrsess trrqrvevql pakipphtal siqvlrkevt lsvpvlltit
      301 qnesvrtemg eyrsvsgtnv saryslkplp atgreqaatk gthtvpgtkm el
//
LOCUS       XP_041316002            1782 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit beta-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041316002
VERSION     XP_041316002.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460068.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1782
                     /product="laminin subunit beta-2"
                     /calculated_mol_wt=194244
     Region          38..272
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); pfam00055"
                     /db_xref="CDD:459653"
     Region          274..326
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(274,276,283,301,303,312)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          338..389
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Site            order(338,340,347,365,368,377)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          401..458
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(401,403,414,429,431,440)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          461..510
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(461,463,475,482,484,493)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          512..552
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(513,515,525,532,534,543)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          559..>618
                     /region_name="CBM6-CBM35-CBM36_like"
                     /note="Carbohydrate Binding Module 6 (CBM6) and CBM35_like
                     superfamily; cl14880"
                     /db_xref="CDD:449372"
     Region          768..>802
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(769,771,781,788,790,799)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          817..865
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(817,819,829,836,838,847)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          862..907
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(863,865,872,879,882,891)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          912..968
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(913,915,929,940,942,951)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          971..1016
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(971,973,985,992,995,1004)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1023..1077
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1023,1025,1035,1049,1051,1060)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1079..1127
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1079,1081,1091,1098,1100,1109)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1127..>1164
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1127,1129,1139,1146,1148,1157)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1251..>1768
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1711..1782
                     /region_name="cc_LAMB2_C"
                     /note="C-terminal coiled-coil domain found in laminin
                     subunit beta-2 (LAMB2); cd22299"
                     /db_xref="CDD:411970"
     Site            order(1714..1715,1718..1719,1721..1722,1725,1732..1733,
                     1735..1736,1739,1742..1743,1746..1747,1749..1751,
                     1753..1754,1757,1760..1761,1763..1765,1767..1768,
                     1770..1772,1774..1776,1778..1781)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:411970"
     CDS             1..1782
                     /gene="LAMB2"
                     /coded_by="XM_041460068.1:184..5532"
                     /db_xref="GeneID:121349524"
ORIGIN      
        1 mrspakrspa allllpllag lgaalapdsp qgcargscyp atgdllvgra arlsatstcg
       61 lrrpqpyciv shlqeekkcf icdsrrpyda rtntnshrie nvvtsfaprp kkawwqseng
      121 vehvsiqldl eaefhfthli mtfktfrpaa mlversadfg htwkvyryfa ydcaasfphv
      181 phgpprridd vvcesrysdi epstegeviy rvldpaipir dpyspaiqnl lrvtnlrvnl
      241 tklhtlgdnl ldsrreirek yyyalyelvm rgncfcygha secaplsgap attdgmvhgr
      301 cvckhhtqgl ncercedfyh dlpwrpaegs stnacrrcdc nehsrrchfd mavflatgnt
      361 sgavcddcqh ntmgrrchlc kpffykdptk dlrdpavcra cdcdpegsld gglcdsaddp
      421 argliagqcr ckehvagprc drckpgffgl stdnpqgcrr cqcdprgtva dgsrcdpvsg
      481 ecfckrlvtg rscnqclpeh wglshdlpgc rpcdcdvgga rnnlcamgtg qcqcrshvtg
      541 rqceqvetgf yrinldhyth eaedarlhqg svverepppd rpaswtgtgf arvleggwve
      601 fhvsdvpfst eydvviryep qhpeawqevg lkvlrpspvs asspcgntip addqlstslp
      661 sgaryvvlsq picleqgvsy tlrlelgcaa ahqdptasvl idslvllpry sslemfiagd
      721 pssmerretf eryhcaqpfh aagpspvaep cssllhslsa ilhdgalpcl cdpqgslsae
      781 cqpqggqcqc kpnvmgrrch hcspgtfgfg pggcrpcqcs regsvsticd sttgqcpcre
      841 gthgprcdrc qpghwgfpvc rpcqcnghae ncdprtgscl rcrdhtdger cqrcaaghfg
      901 npalgsgqhc rpcpcpegps tprhfaascy qdsrsqqvvc hcspgytgsr cdecapgyyg
      961 dplqggrclp cqchdnidvt dpeacdrrtg qclrclynta gphcaecqpg fygdatrhsc
     1021 rrcscnplgt dastcgpqqc hcdrhsgqch clphvegqsc drcspnfwnl asgkgcqpca
     1081 chpqhsltpt cnqftgqcsc rpgfggqtct dcqehhwgdp rqqcracdcd prgiasaqch
     1141 rssghcdcrp gisgvrcdqc argfagtfpa cqpchpcfgd wdrvvqdlaa raralaqras
     1201 llqhtgaaga fqgtfrqlee nlaavrdvva arnttaataa hlthtmeglr rqieeaterl
     1261 trvegeltaa qdanfnashv lntvdrgara lnhslqdleq rlhtlktsnf lgaydsirqs
     1321 ykesqeaerq adastravps pvsisaatrh raeqllasqr ddfnrhnaas rralmdlaar
     1381 aqalslhpln ekvcgvlgdv pcaespcgga gcrdedggrr cgglscggav skadsaldra
     1441 rhaqeelrqa asdmaqlshk vaeakgkade arlraqaald kanqtrarve ssnkelreli
     1501 shvkaflsqe gadpesievv asrvlelslp aapdqihrla eeiktrvrsl asvdaileqt
     1561 asdvqqagql lqdaqrarar aegvrgtaea vrqaleearq aqgtaeqalq qaagdiqhse
     1621 salgmmqsqt gsaeqqlaga meqiglldrq tdalkvrran nslaatraqe aastardrag
     1681 eakqvlegpl rdryrtaqel vehraqgvqq agsraqqlre eaagllqdaq gklqrlrale
     1741 eeyernervl dakaaqlggl earmrevldt inqqvqiynt cq
//
LOCUS       XP_041316013            1433 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 19 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316013
VERSION     XP_041316013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1433
                     /product="ubiquitin carboxyl-terminal hydrolase 19 isoform
                     X1"
                     /calculated_mol_wt=159902
     Region          61..143
                     /region_name="p23_like"
                     /note="Proteins containing this p23_like domain include
                     p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1.
                     Both are co-chaperones for the heat shock protein (Hsp)
                     90. p23 binds Hsp90 and participates in the folding of a
                     number of Hsp90 clients, including...; cd06463"
                     /db_xref="CDD:107220"
     Region          381..477
                     /region_name="p23_CS_SGT1_like"
                     /note="p23_like domain similar to the C-terminal
                     CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of
                     Skp1). Sgt1 interacts with multiple protein complexes and
                     has the features of a cochaperone. Human (h) Sgt1
                     interacts with both Hsp70 and Hsp90, and has...; cd06466"
                     /db_xref="CDD:107223"
     Region          468..590
                     /region_name="USP19_linker"
                     /note="Linker region of USP19 deubiquitinase; pfam16602"
                     /db_xref="CDD:465191"
     Region          <588..1328
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..1433
                     /gene="USP19"
                     /coded_by="XM_041460079.1:263..4564"
                     /db_xref="GeneID:121349531"
ORIGIN      
        1 mssstnapgq rrasrgldda tnkkkqkdra nqeskevsrp eleqaetaqe kdseeellld
       61 wkqnadeiii klnlgtgalk aedvradftd tdcvvrlpdg rqwscqfyee iegscskiqc
      121 kkgnflqlvl qkkiplhnws sllkkrkdgs kevakgaacw engkekasae ltpeepraeg
      181 tepprsrrep snpkrgpgrs ealggkspas pgtqsgpsak ravylkvapt eedpnarvtg
      241 stepskghsg rtgsrrngra sqvdapaala dlalplekav alaketvpve mppltpttev
      301 lphrvatcve krvlqpgspt ealrsrdclp ilgesskaip vatppmgrdg ekrdwskddv
      361 aleaaadepe pfvsltfvkn dsyekgndlm vvhvyvkeih ketskvlfre qdftlvfqts
      421 dtnflrlhpg cgphtvfrwq vklrnliepd qctynftvsr idvclkkrqs qrwggleapa
      481 trgavggakv amptgptpld knppgsnqhp lsskeearts dkekprvedg aldgvaarta
      541 pehlavkqep hipspkptcm vppmthspvs aesveddede dekkkvclpg ftglvnlgnt
      601 cfmnsviqsl sntrelrdyf hdrsfesein ynnplgtggr laigfamllr alwkgthhaf
      661 qpsklkaiva skasqftgya qhdaqefmaf lldglhedln riqnkpytet vdsdgrpdev
      721 vaeeawqrhk mrndsfivdl fqgqyksklv cpmcskvsit fdpflylpvp lpqkqkvltv
      781 yyfakephkk pikflvsisk enssamevld svahsvrvkp enlrlaevik nhfhrmflps
      841 nsldtvsptd lllcfevlsp elakervvel qvqqrpqvps gpvakcaacq kkqlpedekl
      901 krcmrcyrvg ycnvacqrth wpdhkascrp enigfpflis vpesrltyar laqllegyar
      961 ysvsvfqppf qlgrmspeqg lqplhsdkle plaksgcaaa tsapelgdgd rvsslpqepp
     1021 lspavpelqp emgdtttvrs kvltarssll sldsgfsehm esqgdsccek epsyeralkp
     1081 eaaipgyqht pdslsaratp fyitkidaan rehkledkgd tpldltddcs lalvwknner
     1141 lkefvlvesk elecvedpgs aseaaraghf tleqclnlft kpevlapeea wycpkckqhr
     1201 easkqlmlwr lpnvliiqlk rfsfrsfiwr dkindmvdfp vrsldlskfc igrkgeqqlp
     1261 mydlyavinh yggmigghyt ayarlpndkn sqrsdvgwrl fddstvttvd esqvvtryay
     1321 vlfyrrrnsp verplpghps dhraertpsa eaaasqasli wqeleaeeqe lqleapqrpa
     1381 rnswrpcgqk rspgtpqhpd egcvryfvla ttaaivalfl nvfypliyqp rwr
//
LOCUS       XP_041316021            1433 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 19 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316021
VERSION     XP_041316021.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460087.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1433
                     /product="ubiquitin carboxyl-terminal hydrolase 19 isoform
                     X1"
                     /calculated_mol_wt=159902
     Region          61..143
                     /region_name="p23_like"
                     /note="Proteins containing this p23_like domain include
                     p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1.
                     Both are co-chaperones for the heat shock protein (Hsp)
                     90. p23 binds Hsp90 and participates in the folding of a
                     number of Hsp90 clients, including...; cd06463"
                     /db_xref="CDD:107220"
     Region          381..477
                     /region_name="p23_CS_SGT1_like"
                     /note="p23_like domain similar to the C-terminal
                     CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of
                     Skp1). Sgt1 interacts with multiple protein complexes and
                     has the features of a cochaperone. Human (h) Sgt1
                     interacts with both Hsp70 and Hsp90, and has...; cd06466"
                     /db_xref="CDD:107223"
     Region          468..590
                     /region_name="USP19_linker"
                     /note="Linker region of USP19 deubiquitinase; pfam16602"
                     /db_xref="CDD:465191"
     Region          <588..1328
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..1433
                     /gene="USP19"
                     /coded_by="XM_041460087.1:3521..7822"
                     /db_xref="GeneID:121349531"
ORIGIN      
        1 mssstnapgq rrasrgldda tnkkkqkdra nqeskevsrp eleqaetaqe kdseeellld
       61 wkqnadeiii klnlgtgalk aedvradftd tdcvvrlpdg rqwscqfyee iegscskiqc
      121 kkgnflqlvl qkkiplhnws sllkkrkdgs kevakgaacw engkekasae ltpeepraeg
      181 tepprsrrep snpkrgpgrs ealggkspas pgtqsgpsak ravylkvapt eedpnarvtg
      241 stepskghsg rtgsrrngra sqvdapaala dlalplekav alaketvpve mppltpttev
      301 lphrvatcve krvlqpgspt ealrsrdclp ilgesskaip vatppmgrdg ekrdwskddv
      361 aleaaadepe pfvsltfvkn dsyekgndlm vvhvyvkeih ketskvlfre qdftlvfqts
      421 dtnflrlhpg cgphtvfrwq vklrnliepd qctynftvsr idvclkkrqs qrwggleapa
      481 trgavggakv amptgptpld knppgsnqhp lsskeearts dkekprvedg aldgvaarta
      541 pehlavkqep hipspkptcm vppmthspvs aesveddede dekkkvclpg ftglvnlgnt
      601 cfmnsviqsl sntrelrdyf hdrsfesein ynnplgtggr laigfamllr alwkgthhaf
      661 qpsklkaiva skasqftgya qhdaqefmaf lldglhedln riqnkpytet vdsdgrpdev
      721 vaeeawqrhk mrndsfivdl fqgqyksklv cpmcskvsit fdpflylpvp lpqkqkvltv
      781 yyfakephkk pikflvsisk enssamevld svahsvrvkp enlrlaevik nhfhrmflps
      841 nsldtvsptd lllcfevlsp elakervvel qvqqrpqvps gpvakcaacq kkqlpedekl
      901 krcmrcyrvg ycnvacqrth wpdhkascrp enigfpflis vpesrltyar laqllegyar
      961 ysvsvfqppf qlgrmspeqg lqplhsdkle plaksgcaaa tsapelgdgd rvsslpqepp
     1021 lspavpelqp emgdtttvrs kvltarssll sldsgfsehm esqgdsccek epsyeralkp
     1081 eaaipgyqht pdslsaratp fyitkidaan rehkledkgd tpldltddcs lalvwknner
     1141 lkefvlvesk elecvedpgs aseaaraghf tleqclnlft kpevlapeea wycpkckqhr
     1201 easkqlmlwr lpnvliiqlk rfsfrsfiwr dkindmvdfp vrsldlskfc igrkgeqqlp
     1261 mydlyavinh yggmigghyt ayarlpndkn sqrsdvgwrl fddstvttvd esqvvtryay
     1321 vlfyrrrnsp verplpghps dhraertpsa eaaasqasli wqeleaeeqe lqleapqrpa
     1381 rnswrpcgqk rspgtpqhpd egcvryfvla ttaaivalfl nvfypliyqp rwr
//
LOCUS       XP_041316029            1431 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 19 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316029
VERSION     XP_041316029.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460095.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1431
                     /product="ubiquitin carboxyl-terminal hydrolase 19 isoform
                     X2"
                     /calculated_mol_wt=159774
     Region          61..143
                     /region_name="p23_like"
                     /note="Proteins containing this p23_like domain include
                     p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1.
                     Both are co-chaperones for the heat shock protein (Hsp)
                     90. p23 binds Hsp90 and participates in the folding of a
                     number of Hsp90 clients, including...; cd06463"
                     /db_xref="CDD:107220"
     Region          381..477
                     /region_name="p23_CS_SGT1_like"
                     /note="p23_like domain similar to the C-terminal
                     CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of
                     Skp1). Sgt1 interacts with multiple protein complexes and
                     has the features of a cochaperone. Human (h) Sgt1
                     interacts with both Hsp70 and Hsp90, and has...; cd06466"
                     /db_xref="CDD:107223"
     Region          468..588
                     /region_name="USP19_linker"
                     /note="Linker region of USP19 deubiquitinase; pfam16602"
                     /db_xref="CDD:465191"
     Region          <586..1326
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..1431
                     /gene="USP19"
                     /coded_by="XM_041460095.1:263..4558"
                     /db_xref="GeneID:121349531"
ORIGIN      
        1 mssstnapgq rrasrgldda tnkkkqkdra nqeskevsrp eleqaetaqe kdseeellld
       61 wkqnadeiii klnlgtgalk aedvradftd tdcvvrlpdg rqwscqfyee iegscskiqc
      121 kkgnflqlvl qkkiplhnws sllkkrkdgs kevakgaacw engkekasae ltpeepraeg
      181 tepprsrrep snpkrgpgrs ealggkspas pgtqsgpsak ravylkvapt eedpnarvtg
      241 stepskghsg rtgsrrngra sqvdapaala dlalplekav alaketvpve mppltpttev
      301 lphrvatcve krvlqpgspt ealrsrdclp ilgesskaip vatppmgrdg ekrdwskddv
      361 aleaaadepe pfvsltfvkn dsyekgndlm vvhvyvkeih ketskvlfre qdftlvfqts
      421 dtnflrlhpg cgphtvfrwq vklrnliepd qctynftvsr idvclkkrqs qrwggleapa
      481 trvggakvam ptgptpldkn ppgsnqhpls skeeartsdk ekprvedgal dgvaartape
      541 hlavkqephi pspkptcmvp pmthspvsae sveddedede kkkvclpgft glvnlgntcf
      601 mnsviqslsn trelrdyfhd rsfeseinyn nplgtggrla igfamllral wkgthhafqp
      661 sklkaivask asqftgyaqh daqefmafll dglhedlnri qnkpytetvd sdgrpdevva
      721 eeawqrhkmr ndsfivdlfq gqyksklvcp mcskvsitfd pflylpvplp qkqkvltvyy
      781 fakephkkpi kflvsisken ssamevldsv ahsvrvkpen lrlaeviknh fhrmflpsns
      841 ldtvsptdll lcfevlspel akervvelqv qqrpqvpsgp vakcaacqkk qlpedeklkr
      901 cmrcyrvgyc nvacqrthwp dhkascrpen igfpflisvp esrltyarla qllegyarys
      961 vsvfqppfql grmspeqglq plhsdklepl aksgcaaats apelgdgdrv sslpqeppls
     1021 pavpelqpem gdtttvrskv ltarssllsl dsgfsehmes qgdsccekep syeralkpea
     1081 aipgyqhtpd slsaratpfy itkidaanre hkledkgdtp ldltddcsla lvwknnerlk
     1141 efvlveskel ecvedpgsas eaaraghftl eqclnlftkp evlapeeawy cpkckqhrea
     1201 skqlmlwrlp nvliiqlkrf sfrsfiwrdk indmvdfpvr sldlskfcig rkgeqqlpmy
     1261 dlyavinhyg gmigghytay arlpndknsq rsdvgwrlfd dstvttvdes qvvtryayvl
     1321 fyrrrnspve rplpghpsdh raertpsaea aasqasliwq eleaeeqelq leapqrparn
     1381 swrpcgqkrs pgtpqhpdeg cvryfvlatt aaivalflnv fypliyqprw r
//
LOCUS       XP_041316038            1427 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 19 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316038
VERSION     XP_041316038.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460104.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1427
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1427
                     /product="ubiquitin carboxyl-terminal hydrolase 19 isoform
                     X3"
                     /calculated_mol_wt=159203
     Region          61..143
                     /region_name="p23_like"
                     /note="Proteins containing this p23_like domain include
                     p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1.
                     Both are co-chaperones for the heat shock protein (Hsp)
                     90. p23 binds Hsp90 and participates in the folding of a
                     number of Hsp90 clients, including...; cd06463"
                     /db_xref="CDD:107220"
     Region          381..477
                     /region_name="p23_CS_SGT1_like"
                     /note="p23_like domain similar to the C-terminal
                     CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of
                     Skp1). Sgt1 interacts with multiple protein complexes and
                     has the features of a cochaperone. Human (h) Sgt1
                     interacts with both Hsp70 and Hsp90, and has...; cd06466"
                     /db_xref="CDD:107223"
     Region          468..590
                     /region_name="USP19_linker"
                     /note="Linker region of USP19 deubiquitinase; pfam16602"
                     /db_xref="CDD:465191"
     Region          <588..1328
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..1427
                     /gene="USP19"
                     /coded_by="XM_041460104.1:263..4546"
                     /db_xref="GeneID:121349531"
ORIGIN      
        1 mssstnapgq rrasrgldda tnkkkqkdra nqeskevsrp eleqaetaqe kdseeellld
       61 wkqnadeiii klnlgtgalk aedvradftd tdcvvrlpdg rqwscqfyee iegscskiqc
      121 kkgnflqlvl qkkiplhnws sllkkrkdgs kevakgaacw engkekasae ltpeepraeg
      181 tepprsrrep snpkrgpgrs ealggkspas pgtqsgpsak ravylkvapt eedpnarvtg
      241 stepskghsg rtgsrrngra sqvdapaala dlalplekav alaketvpve mppltpttev
      301 lphrvatcve krvlqpgspt ealrsrdclp ilgesskaip vatppmgrdg ekrdwskddv
      361 aleaaadepe pfvsltfvkn dsyekgndlm vvhvyvkeih ketskvlfre qdftlvfqts
      421 dtnflrlhpg cgphtvfrwq vklrnliepd qctynftvsr idvclkkrqs qrwggleapa
      481 trgavggakv amptgptpld knppgsnqhp lsskeearts dkekprvedg aldgvaarta
      541 pehlavkqep hipspkptcm vppmthspvs aesveddede dekkkvclpg ftglvnlgnt
      601 cfmnsviqsl sntrelrdyf hdrsfesein ynnplgtggr laigfamllr alwkgthhaf
      661 qpsklkaiva skasqftgya qhdaqefmaf lldglhedln riqnkpytet vdsdgrpdev
      721 vaeeawqrhk mrndsfivdl fqgqyksklv cpmcskvsit fdpflylpvp lpqkqkvltv
      781 yyfakephkk pikflvsisk enssamevld svahsvrvkp enlrlaevik nhfhrmflps
      841 nsldtvsptd lllcfevlsp elakervvel qvqqrpqvps gpvakcaacq kkqlpedekl
      901 krcmrcyrvg ycnvacqrth wpdhkascrp enigfpflis vpesrltyar laqllegyar
      961 ysvsvfqppf qlgrmspeqg lqplhsdkle plaksgcaaa tsapelgdgd rvsslpqepp
     1021 lspavpelqp emgdtttvrs kvltarssll sldsgfsehm esqgdsccek epsyeralkp
     1081 eaaipgyqht pdslsaratp fyitkidaan rehkledkgd tpldltddcs lalvwknner
     1141 lkefvlvesk elecvedpgs aseaaraghf tleqclnlft kpevlapeea wycpkckqhr
     1201 easkqlmlwr lpnvliiqlk rfsfrsfiwr dkindmvdfp vrsldlskfc igrkgeqqlp
     1261 mydlyavinh yggmigghyt ayarlpndkn sqrsdvgwrl fddstvttvd esqvvtryay
     1321 vlfyrrrnsp verplpghps dhraertpsa eaaasqelea eeqelqleap qrparnswrp
     1381 cgqkrspgtp qhpdegcvry fvlattaaiv alflnvfypl iyqprwr
//
LOCUS       XP_041316047            1414 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 19 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316047
VERSION     XP_041316047.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460113.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1414
                     /product="ubiquitin carboxyl-terminal hydrolase 19 isoform
                     X4"
                     /calculated_mol_wt=157745
     Region          42..124
                     /region_name="p23_like"
                     /note="Proteins containing this p23_like domain include
                     p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1.
                     Both are co-chaperones for the heat shock protein (Hsp)
                     90. p23 binds Hsp90 and participates in the folding of a
                     number of Hsp90 clients, including...; cd06463"
                     /db_xref="CDD:107220"
     Region          362..458
                     /region_name="p23_CS_SGT1_like"
                     /note="p23_like domain similar to the C-terminal
                     CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of
                     Skp1). Sgt1 interacts with multiple protein complexes and
                     has the features of a cochaperone. Human (h) Sgt1
                     interacts with both Hsp70 and Hsp90, and has...; cd06466"
                     /db_xref="CDD:107223"
     Region          449..571
                     /region_name="USP19_linker"
                     /note="Linker region of USP19 deubiquitinase; pfam16602"
                     /db_xref="CDD:465191"
     Region          <569..1309
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..1414
                     /gene="USP19"
                     /coded_by="XM_041460113.1:263..4507"
                     /db_xref="GeneID:121349531"
ORIGIN      
        1 mssstnapgq rrasrgldda tnkkkqkdra nqeskeelll dwkqnadeii iklnlgtgal
       61 kaedvradft dtdcvvrlpd grqwscqfye eiegscskiq ckkgnflqlv lqkkiplhnw
      121 ssllkkrkdg skevakgaac wengkekasa eltpeeprae gtepprsrre psnpkrgpgr
      181 sealggkspa spgtqsgpsa kravylkvap teedpnarvt gstepskghs grtgsrrngr
      241 asqvdapaal adlalpleka valaketvpv emppltptte vlphrvatcv ekrvlqpgsp
      301 tealrsrdcl pilgesskai pvatppmgrd gekrdwskdd valeaaadep epfvsltfvk
      361 ndsyekgndl mvvhvyvkei hketskvlfr eqdftlvfqt sdtnflrlhp gcgphtvfrw
      421 qvklrnliep dqctynftvs ridvclkkrq sqrwggleap atrgavggak vamptgptpl
      481 dknppgsnqh plsskeeart sdkekprved galdgvaart apehlavkqe phipspkptc
      541 mvppmthspv saesvedded edekkkvclp gftglvnlgn tcfmnsviqs lsntrelrdy
      601 fhdrsfesei nynnplgtgg rlaigfamll ralwkgthha fqpsklkaiv askasqftgy
      661 aqhdaqefma flldglhedl nriqnkpyte tvdsdgrpde vvaeeawqrh kmrndsfivd
      721 lfqgqykskl vcpmcskvsi tfdpflylpv plpqkqkvlt vyyfakephk kpikflvsis
      781 kenssamevl dsvahsvrvk penlrlaevi knhfhrmflp snsldtvspt dlllcfevls
      841 pelakervve lqvqqrpqvp sgpvakcaac qkkqlpedek lkrcmrcyrv gycnvacqrt
      901 hwpdhkascr penigfpfli svpesrltya rlaqllegya rysvsvfqpp fqlgrmspeq
      961 glqplhsdkl eplaksgcaa atsapelgdg drvsslpqep plspavpelq pemgdtttvr
     1021 skvltarssl lsldsgfseh mesqgdscce kepsyeralk peaaipgyqh tpdslsarat
     1081 pfyitkidaa nrehkledkg dtpldltddc slalvwknne rlkefvlves kelecvedpg
     1141 saseaaragh ftleqclnlf tkpevlapee awycpkckqh reaskqlmlw rlpnvliiql
     1201 krfsfrsfiw rdkindmvdf pvrsldlskf cigrkgeqql pmydlyavin hyggmigghy
     1261 tayarlpndk nsqrsdvgwr lfddstvttv desqvvtrya yvlfyrrrns pverplpghp
     1321 sdhraertps aeaaasqasl iwqeleaeeq elqleapqrp arnswrpcgq krspgtpqhp
     1381 degcvryfvl attaaivalf lnvfypliyq prwr
//
LOCUS       XP_041316055            1402 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 19 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316055
VERSION     XP_041316055.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460121.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1402
                     /product="ubiquitin carboxyl-terminal hydrolase 19 isoform
                     X5"
                     /calculated_mol_wt=155593
     Region          61..143
                     /region_name="p23_like"
                     /note="Proteins containing this p23_like domain include
                     p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1.
                     Both are co-chaperones for the heat shock protein (Hsp)
                     90. p23 binds Hsp90 and participates in the folding of a
                     number of Hsp90 clients, including...; cd06463"
                     /db_xref="CDD:107220"
     Region          381..477
                     /region_name="p23_CS_SGT1_like"
                     /note="p23_like domain similar to the C-terminal
                     CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of
                     Skp1). Sgt1 interacts with multiple protein complexes and
                     has the features of a cochaperone. Human (h) Sgt1
                     interacts with both Hsp70 and Hsp90, and has...; cd06466"
                     /db_xref="CDD:107223"
     Region          468..590
                     /region_name="USP19_linker"
                     /note="Linker region of USP19 deubiquitinase; pfam16602"
                     /db_xref="CDD:465191"
     Region          <588..1328
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..1402
                     /gene="USP19"
                     /coded_by="XM_041460121.1:262..4470"
                     /db_xref="GeneID:121349531"
ORIGIN      
        1 mssstnapgq rrasrgldda tnkkkqkdra nqeskevsrp eleqaetaqe kdseeellld
       61 wkqnadeiii klnlgtgalk aedvradftd tdcvvrlpdg rqwscqfyee iegscskiqc
      121 kkgnflqlvl qkkiplhnws sllkkrkdgs kevakgaacw engkekasae ltpeepraeg
      181 tepprsrrep snpkrgpgrs ealggkspas pgtqsgpsak ravylkvapt eedpnarvtg
      241 stepskghsg rtgsrrngra sqvdapaala dlalplekav alaketvpve mppltpttev
      301 lphrvatcve krvlqpgspt ealrsrdclp ilgesskaip vatppmgrdg ekrdwskddv
      361 aleaaadepe pfvsltfvkn dsyekgndlm vvhvyvkeih ketskvlfre qdftlvfqts
      421 dtnflrlhpg cgphtvfrwq vklrnliepd qctynftvsr idvclkkrqs qrwggleapa
      481 trgavggakv amptgptpld knppgsnqhp lsskeearts dkekprvedg aldgvaarta
      541 pehlavkqep hipspkptcm vppmthspvs aesveddede dekkkvclpg ftglvnlgnt
      601 cfmnsviqsl sntrelrdyf hdrsfesein ynnplgtggr laigfamllr alwkgthhaf
      661 qpsklkaiva skasqftgya qhdaqefmaf lldglhedln riqnkpytet vdsdgrpdev
      721 vaeeawqrhk mrndsfivdl fqgqyksklv cpmcskvsit fdpflylpvp lpqkqkvltv
      781 yyfakephkk pikflvsisk enssamevld svahsvrvkp enlrlaevik nhfhrmflps
      841 nsldtvsptd lllcfevlsp elakervvel qvqqrpqvps gpvakcaacq kkqlpedekl
      901 krcmrcyrvg ycnvacqrth wpdhkascrp enigfpflis vpesrltyar laqllegyar
      961 ysvsvfqppf qlgrmspeqg lqplhsdkle plaksgcaaa tsapelgdgd rvsslpqepp
     1021 lspavpelqp emgdtttvrs kvltarssll sldsgfsehm esqgdsccek epsyeralkp
     1081 eaaipgyqht pdslsaratp fyitkidaan rehkledkgd tpldltddcs lalvwknner
     1141 lkefvlvesk elecvedpgs aseaaraghf tleqclnlft kpevlapeea wycpkckqhr
     1201 easkqlmlwr lpnvliiqlk rfsfrsfiwr dkindmvdfp vrsldlskfc igrkgeqqlp
     1261 mydlyavinh yggmigghyt ayarlpndkn sqrsdvgwrl fddstvttvd esqvvtryay
     1321 vlfyrrrnsp verplpghps dhraertpsa eaaasqglpp vpfgsglape gapplaaegl
     1381 perfaspaeh papsyssmee vd
//
LOCUS       XP_041316067            1400 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 19 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316067
VERSION     XP_041316067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1400
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1400
                     /product="ubiquitin carboxyl-terminal hydrolase 19 isoform
                     X6"
                     /calculated_mol_wt=155465
     Region          61..143
                     /region_name="p23_like"
                     /note="Proteins containing this p23_like domain include
                     p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1.
                     Both are co-chaperones for the heat shock protein (Hsp)
                     90. p23 binds Hsp90 and participates in the folding of a
                     number of Hsp90 clients, including...; cd06463"
                     /db_xref="CDD:107220"
     Region          381..477
                     /region_name="p23_CS_SGT1_like"
                     /note="p23_like domain similar to the C-terminal
                     CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of
                     Skp1). Sgt1 interacts with multiple protein complexes and
                     has the features of a cochaperone. Human (h) Sgt1
                     interacts with both Hsp70 and Hsp90, and has...; cd06466"
                     /db_xref="CDD:107223"
     Region          468..588
                     /region_name="USP19_linker"
                     /note="Linker region of USP19 deubiquitinase; pfam16602"
                     /db_xref="CDD:465191"
     Region          <586..1326
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..1400
                     /gene="USP19"
                     /coded_by="XM_041460133.1:3521..7723"
                     /db_xref="GeneID:121349531"
ORIGIN      
        1 mssstnapgq rrasrgldda tnkkkqkdra nqeskevsrp eleqaetaqe kdseeellld
       61 wkqnadeiii klnlgtgalk aedvradftd tdcvvrlpdg rqwscqfyee iegscskiqc
      121 kkgnflqlvl qkkiplhnws sllkkrkdgs kevakgaacw engkekasae ltpeepraeg
      181 tepprsrrep snpkrgpgrs ealggkspas pgtqsgpsak ravylkvapt eedpnarvtg
      241 stepskghsg rtgsrrngra sqvdapaala dlalplekav alaketvpve mppltpttev
      301 lphrvatcve krvlqpgspt ealrsrdclp ilgesskaip vatppmgrdg ekrdwskddv
      361 aleaaadepe pfvsltfvkn dsyekgndlm vvhvyvkeih ketskvlfre qdftlvfqts
      421 dtnflrlhpg cgphtvfrwq vklrnliepd qctynftvsr idvclkkrqs qrwggleapa
      481 trvggakvam ptgptpldkn ppgsnqhpls skeeartsdk ekprvedgal dgvaartape
      541 hlavkqephi pspkptcmvp pmthspvsae sveddedede kkkvclpgft glvnlgntcf
      601 mnsviqslsn trelrdyfhd rsfeseinyn nplgtggrla igfamllral wkgthhafqp
      661 sklkaivask asqftgyaqh daqefmafll dglhedlnri qnkpytetvd sdgrpdevva
      721 eeawqrhkmr ndsfivdlfq gqyksklvcp mcskvsitfd pflylpvplp qkqkvltvyy
      781 fakephkkpi kflvsisken ssamevldsv ahsvrvkpen lrlaeviknh fhrmflpsns
      841 ldtvsptdll lcfevlspel akervvelqv qqrpqvpsgp vakcaacqkk qlpedeklkr
      901 cmrcyrvgyc nvacqrthwp dhkascrpen igfpflisvp esrltyarla qllegyarys
      961 vsvfqppfql grmspeqglq plhsdklepl aksgcaaats apelgdgdrv sslpqeppls
     1021 pavpelqpem gdtttvrskv ltarssllsl dsgfsehmes qgdsccekep syeralkpea
     1081 aipgyqhtpd slsaratpfy itkidaanre hkledkgdtp ldltddcsla lvwknnerlk
     1141 efvlveskel ecvedpgsas eaaraghftl eqclnlftkp evlapeeawy cpkckqhrea
     1201 skqlmlwrlp nvliiqlkrf sfrsfiwrdk indmvdfpvr sldlskfcig rkgeqqlpmy
     1261 dlyavinhyg gmigghytay arlpndknsq rsdvgwrlfd dstvttvdes qvvtryayvl
     1321 fyrrrnspve rplpghpsdh raertpsaea aasqglppvp fgsglapega pplaaeglpe
     1381 rfaspaehpa psyssmeevd
//
LOCUS       XP_041316079             895 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316079
VERSION     XP_041316079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460145.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..895
                     /product="ubiquitin carboxyl-terminal hydrolase 4 isoform
                     X1"
                     /calculated_mol_wt=100491
     Region          18..875
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..895
                     /gene="USP4"
                     /coded_by="XM_041460145.1:147..2834"
                     /db_xref="GeneID:121349572"
ORIGIN      
        1 mfgagdpnlf pgpvdnaglf pgpidnsglf gdpqtqslke hlideldyvl vpteawnklv
       61 awygcidgqq pivrkvveyg lfvkhykvev yllelklces sdpdnvisch fskadtvati
      121 ekemrklfni paeketrlwn rymsntyeql skmdstvqda glyqgqvvli evknedgtwp
      181 gqhclaksst atsrnfttss kssassyssv satsvitngd ssnsyglnss hlgrggsgfa
      241 cnsyncrdsa slsqpglcgl snlgntcfmn salqclsntp pltdyfledk yeaeinqnnp
      301 lgmrgeiaea yaelikqmws grqshvaprm fktqvgrfap qfsgyqqqds qellaflldg
      361 lhedlnrvkk kpylelkdan grpdsevake awenhrlrnd siivdifhgl fkstlvcpkc
      421 skvsvtfdpf cyltlplplr rdrlmevtlv yadpqrrpvq yrvvvpmmga isdlceslsk
      481 lsgvpaenmv vtdvynhrfh kifqmdegln himpkddifv yevckpsedg seyvtlsiyf
      541 rektvrqssn tsgtvlfgqp llisvpkhkl tvdhlysvvl eqisrcvklp laeeysspcp
      601 drgtcngsng vvegdieeme hqdggeegke kltevdpchs egcmqvesar dlqpckkqhf
      661 tfslvnssgt seinsivegk ilklnafsav aidwdsetrr llydeqeaqa fekhgsmlql
      721 qkkkavvalr dcielfttme tlgehdpwyc pnckkhqqat kkfdlwslpr ilvvhlkrfs
      781 ysrywrdkld tvvefpirgl nmsefvcdpr agsyvydlia vsnhygamgv ghytayaknk
      841 vnnkwyyfdd ssvsvasedq ivtkaayvlf yerrngeehs apsapqeecd gmdtn
//
LOCUS       XP_041316089             847 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316089
VERSION     XP_041316089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..847
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..847
                     /product="ubiquitin carboxyl-terminal hydrolase 4 isoform
                     X2"
                     /calculated_mol_wt=95715
     Region          18..827
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     CDS             1..847
                     /gene="USP4"
                     /coded_by="XM_041460155.1:147..2690"
                     /db_xref="GeneID:121349572"
ORIGIN      
        1 mfgagdpnlf pgpvdnaglf pgpidnsglf gdpqtqslke hlideldyvl vpteawnklv
       61 awygcidgqq pivrkvveyg lfvkhykvev yllelklces sdpdnvisch fskadtvati
      121 ekemrklfni paeketrlwn rymsntyeql skmdstvqda glyqgqvvli evknedgtwp
      181 gqhclakgsg facnsyncrd saslsqpglc glsnlgntcf mnsalqclsn tppltdyfle
      241 dkyeaeinqn nplgmrgeia eayaelikqm wsgrqshvap rmfktqvgrf apqfsgyqqq
      301 dsqellafll dglhedlnrv kkkpylelkd angrpdseva keawenhrlr ndsiivdifh
      361 glfkstlvcp kcskvsvtfd pfcyltlplp lrrdrlmevt lvyadpqrrp vqyrvvvpmm
      421 gaisdlcesl sklsgvpaen mvvtdvynhr fhkifqmdeg lnhimpkddi fvyevckpse
      481 dgseyvtlsi yfrektvrqs sntsgtvlfg qpllisvpkh kltvdhlysv vleqisrcvk
      541 lplaeeyssp cpdrgtcngs ngvvegdiee mehqdggeeg kekltevdpc hsegcmqves
      601 ardlqpckkq hftfslvnss gtseinsive gkilklnafs avaidwdset rrllydeqea
      661 qafekhgsml qlqkkkavva lrdcielftt metlgehdpw ycpnckkhqq atkkfdlwsl
      721 prilvvhlkr fsysrywrdk ldtvvefpir glnmsefvcd pragsyvydl iavsnhygam
      781 gvghytayak nkvnnkwyyf ddssvsvase dqivtkaayv lfyerrngee hsapsapqee
      841 cdgmdtn
//
LOCUS       XP_041316104             238 aa            linear   VRT 06-MAY-2021
DEFINITION  glutathione peroxidase 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041316104
VERSION     XP_041316104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="glutathione peroxidase 1-like"
                     /calculated_mol_wt=25441
     Region          66..230
                     /region_name="GSH_Peroxidase"
                     /note="Glutathione (GSH) peroxidase family; tetrameric
                     selenoenzymes that catalyze the reduction of a variety of
                     hydroperoxides including lipid peroxidases, using GSH as a
                     specific electron donor substrate. GSH peroxidase contains
                     one selenocysteine residue per...; cd00340"
                     /db_xref="CDD:238207"
     Site            order(87,122,200)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:238207"
     Site            order(121,124,126,129,132,136)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238207"
     CDS             1..238
                     /gene="LOC121349581"
                     /coded_by="XM_041460170.1:16..732"
                     /db_xref="GeneID:121349581"
ORIGIN      
        1 mpargsarer lgagrggvgg gsgraergsg gsgvappalr tmaatgaggs aagleglsak
       61 plgaakplsl gslrgkvllv anvaslugtt trdflqlnel qqrygprglq vlgfpcnqfg
      121 hqenctndei lpmlehvrpg ngfkpnfmmf ekcevngkda hplftflkea lpfphddpss
      181 lmtnpqyiiw spvcrndiaw nfekfligpd gvpfkrysrs fetikiqddi elllqkva
//
LOCUS       XP_041316116             193 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming protein RhoA [Pyrgilauda ruficollis].
ACCESSION   XP_041316116
VERSION     XP_041316116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..193
                     /product="transforming protein RhoA"
                     /calculated_mol_wt=21651
     Region          5..179
                     /region_name="RhoA_like"
                     /note="Ras homology family A (RhoA)-like includes RhoA,
                     RhoB and RhoC; cd01870"
                     /db_xref="CDD:206662"
     Site            order(5,34,37..38,41,43,45,54,58..59,61..63,66,68,72)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            12..19
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206662"
     Site            order(15..20,34..35,37,59..60,118,120,161..162)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206662"
     Site            order(23,25..29,42..43,45..47,52..54,163..164,168..169,
                     172)
                     /site_type="active"
                     /note="PKN/PRK1 effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(34,36,38..39,63..66,69,72,94)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            34..42
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206662"
     Site            order(37..38,61,66,68..69,71..72,75,105..106,108)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            37
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206662"
     Site            order(39,65..69,72,97,101,105)
                     /site_type="active"
                     /note="Mdia effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(39..40,65..66,68..69,72)
                     /site_type="other"
                     /note="Rho kinase (ROCK) effector interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            59..62
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206662"
     Site            62..79
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206662"
     Site            117..120
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206662"
     Site            160..162
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206662"
     CDS             1..193
                     /gene="RHOA"
                     /coded_by="XM_041460182.1:88..669"
                     /db_xref="GeneID:121349586"
ORIGIN      
        1 maairkklvi vgdgacgktc llivfskdqf pevyvptvfe nyvadievdg kqvelalwdt
       61 agqedydrlr plsypdtdvi lmcfsidspd slenipekwt pevkhfcpnv piilvgnkkd
      121 lrndehtrre lakmkqepvk peegrdmanr igafgymecs aktkdgvrev fematraalq
      181 arrgkkksgc lll
//
LOCUS       XP_041316124             193 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming protein RhoA [Pyrgilauda ruficollis].
ACCESSION   XP_041316124
VERSION     XP_041316124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..193
                     /product="transforming protein RhoA"
                     /calculated_mol_wt=21651
     Region          5..179
                     /region_name="RhoA_like"
                     /note="Ras homology family A (RhoA)-like includes RhoA,
                     RhoB and RhoC; cd01870"
                     /db_xref="CDD:206662"
     Site            order(5,34,37..38,41,43,45,54,58..59,61..63,66,68,72)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            12..19
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206662"
     Site            order(15..20,34..35,37,59..60,118,120,161..162)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206662"
     Site            order(23,25..29,42..43,45..47,52..54,163..164,168..169,
                     172)
                     /site_type="active"
                     /note="PKN/PRK1 effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(34,36,38..39,63..66,69,72,94)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            34..42
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206662"
     Site            order(37..38,61,66,68..69,71..72,75,105..106,108)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            37
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206662"
     Site            order(39,65..69,72,97,101,105)
                     /site_type="active"
                     /note="Mdia effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(39..40,65..66,68..69,72)
                     /site_type="other"
                     /note="Rho kinase (ROCK) effector interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            59..62
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206662"
     Site            62..79
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206662"
     Site            117..120
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206662"
     Site            160..162
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206662"
     CDS             1..193
                     /gene="RHOA"
                     /coded_by="XM_041460190.1:136..717"
                     /db_xref="GeneID:121349586"
ORIGIN      
        1 maairkklvi vgdgacgktc llivfskdqf pevyvptvfe nyvadievdg kqvelalwdt
       61 agqedydrlr plsypdtdvi lmcfsidspd slenipekwt pevkhfcpnv piilvgnkkd
      121 lrndehtrre lakmkqepvk peegrdmanr igafgymecs aktkdgvrev fematraalq
      181 arrgkkksgc lll
//
LOCUS       XP_041316135             858 aa            linear   VRT 06-MAY-2021
DEFINITION  ataxin-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041316135
VERSION     XP_041316135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460201.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..858
                     /product="ataxin-7"
                     /calculated_mol_wt=91585
     Region          307..368
                     /region_name="SCA7"
                     /note="zinc-binding domain; pfam08313"
                     /db_xref="CDD:462422"
     CDS             1..858
                     /gene="ATXN7"
                     /coded_by="XM_041460201.1:273..2849"
                     /db_xref="GeneID:121349602"
ORIGIN      
        1 msaraagdvr reqrgaaarq rqrrprhgeg ggggggsgag paataaamaa vgerrslpsp
       61 eamlgqpwsh wvdaaklhgn dgtaleesfk eygrnreamr lcredmpifg lcpahddfyl
      121 vmcnhcnqvv kpqafqshye rrhsssskpp ltppsssvfs lissfpsknk gssgsgssrs
      181 ssggtsasss nskllkspkd klqisgnnrl mhsvqhskvp hdkimtpsvk vekihpkidg
      241 aqlkaavgpt csttvsssik tglncpsipk pplpspgqil ngkgllsvpp flekkpeent
      301 nnrkflhkrl serefdpdiy cgvidvetrk pctrsltckt hsltqrravq grrkrfdvll
      361 aehksktrek ellrhsdhhq qmpplrephp sptktsqelh qnshgvtlte skpllpnkpk
      421 phppslprpp gcpaqhsgna psespsvhes phpplpaaep asrlssdege cdekeepvek
      481 ldchysghhp qpaafctfgs qqigrgyyvf dkrwnhirca ldfmlekhln sqmwkkippa
      541 ssntasvrap hrtnlmpasq hgvsaagfll pttvmsspal vspscvslns ksvpshgttl
      601 nanpaalgav dpvcsmqsrq vssspstptv lssvpspmas kpqkmkssks fkpkespags
      661 gtcnstgsvs sssggsgknr knssallaps hstesfrknc vvnsgnsgts yhpsvtassh
      721 svglncmtsk ansvslkhdq sgrgpptgsp aesikrmsvm mnssdstlsl gpfvhqssel
      781 tvnshssfsh shtsldklig kkrkcspgss sinssssksn kvakltsvnn vhakhtgaip
      841 gtqglmnnsl fhqpkarp
//
LOCUS       XP_041316145             858 aa            linear   VRT 06-MAY-2021
DEFINITION  ataxin-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041316145
VERSION     XP_041316145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460211.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..858
                     /product="ataxin-7"
                     /calculated_mol_wt=91585
     Region          307..368
                     /region_name="SCA7"
                     /note="zinc-binding domain; pfam08313"
                     /db_xref="CDD:462422"
     CDS             1..858
                     /gene="ATXN7"
                     /coded_by="XM_041460211.1:239..2815"
                     /db_xref="GeneID:121349602"
ORIGIN      
        1 msaraagdvr reqrgaaarq rqrrprhgeg ggggggsgag paataaamaa vgerrslpsp
       61 eamlgqpwsh wvdaaklhgn dgtaleesfk eygrnreamr lcredmpifg lcpahddfyl
      121 vmcnhcnqvv kpqafqshye rrhsssskpp ltppsssvfs lissfpsknk gssgsgssrs
      181 ssggtsasss nskllkspkd klqisgnnrl mhsvqhskvp hdkimtpsvk vekihpkidg
      241 aqlkaavgpt csttvsssik tglncpsipk pplpspgqil ngkgllsvpp flekkpeent
      301 nnrkflhkrl serefdpdiy cgvidvetrk pctrsltckt hsltqrravq grrkrfdvll
      361 aehksktrek ellrhsdhhq qmpplrephp sptktsqelh qnshgvtlte skpllpnkpk
      421 phppslprpp gcpaqhsgna psespsvhes phpplpaaep asrlssdege cdekeepvek
      481 ldchysghhp qpaafctfgs qqigrgyyvf dkrwnhirca ldfmlekhln sqmwkkippa
      541 ssntasvrap hrtnlmpasq hgvsaagfll pttvmsspal vspscvslns ksvpshgttl
      601 nanpaalgav dpvcsmqsrq vssspstptv lssvpspmas kpqkmkssks fkpkespags
      661 gtcnstgsvs sssggsgknr knssallaps hstesfrknc vvnsgnsgts yhpsvtassh
      721 svglncmtsk ansvslkhdq sgrgpptgsp aesikrmsvm mnssdstlsl gpfvhqssel
      781 tvnshssfsh shtsldklig kkrkcspgss sinssssksn kvakltsvnn vhakhtgaip
      841 gtqglmnnsl fhqpkarp
//
LOCUS       XP_041316156             204 aa            linear   VRT 06-MAY-2021
DEFINITION  THO complex subunit 7 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041316156
VERSION     XP_041316156.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460222.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="THO complex subunit 7 homolog"
                     /calculated_mol_wt=23689
     Region          7..139
                     /region_name="THOC7"
                     /note="Tho complex subunit 7; pfam05615"
                     /db_xref="CDD:461692"
     Region          <103..>204
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..204
                     /gene="THOC7"
                     /coded_by="XM_041460222.1:249..863"
                     /db_xref="GeneID:121349612"
ORIGIN      
        1 mgavtddevi rkrllidgdg agddrrinll vksfikwcns gsqeegysqy qrmlstlsqc
       61 efsmgktllv ydmnlremen yekiykdien siaaahekis eckkqilqak rirknrqeyd
      121 alakviqhhp drhetlkqle algkelqnls hikenvedkl elrrkqfhvl lstihelqqt
      181 lendeklsea eesqetqmea eakq
//
LOCUS       XP_041316171             186 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 8B [Pyrgilauda ruficollis].
ACCESSION   XP_041316171
VERSION     XP_041316171.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460237.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..186
                     /product="ADP-ribosylation factor-like protein 8B"
                     /calculated_mol_wt=21364
     Region          22..180
                     /region_name="Arl10_like"
                     /note="Arf-like 9 (Arl9) and 10 (Arl10) GTPases; cd04159"
                     /db_xref="CDD:206724"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206724"
     Site            order(29..30,34,38,51..58,80,85)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206724"
     Site            order(30..35,130..131,133..134,163..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206724"
     Site            order(39..42,45..55)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206724"
     Site            order(52..56,61,71,75,81,83..85)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206724"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206724"
     Site            order(53..60,70,81,84..85)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206724"
     Site            order(56..63,65..70)
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206724"
     Site            71..88
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206724"
     Site            71..74
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206724"
     Site            130..133
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206724"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206724"
     CDS             1..186
                     /gene="ARL8B"
                     /coded_by="XM_041460237.1:194..754"
                     /db_xref="GeneID:121349619"
ORIGIN      
        1 mlallsrlld wfrslfwkee meltlvglqy sgkttfvnvi asgqfsedmi ptvgfnmrkv
       61 tkgnvtikiw diggqprfrs mwerycrgvn aivymvdaad rdkieasrne lhnlldkpql
      121 qgipvlvlgn krdlpnalde kqliekmnla aiqdreiccy sisckekdni ditlqwliqh
      181 sksrrs
//
LOCUS       XP_041316183            1931 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 9
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041316183
VERSION     XP_041316183.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460249.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1931
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1931
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X1"
                     /calculated_mol_wt=215646
     Region          42..196
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          281..486
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(424..425,428,434)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          501..569
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          582..634
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          639..743
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          745..862
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          876..923
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          930..984
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          992..1044
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1047..1099
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1102..1156
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1177..1230
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1233..1286
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1328..1379
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1382..1435
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1441..1494
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1497..1550
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1555..1608
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1612..1671
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1677..1729
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1732..1930
                     /region_name="GON"
                     /note="GON domain; pfam08685"
                     /db_xref="CDD:462559"
     CDS             1..1931
                     /gene="ADAMTS9"
                     /coded_by="XM_041460249.1:722..6517"
                     /db_xref="GeneID:121349625"
ORIGIN      
        1 mqlaplalal ttlfidglrt garrqklhpr qaqlleklse yeivtptrvn efgepfptdv
       61 hfrrrrrsts aapdawtaav adspkahyrl safgqqflfn ltassafiap lftvsllgep
      121 aadqrrlyae aadadvkhcf yrghvnarpr ltavislcsg mlgtfksddg dyfvepllsl
      181 eeqeyeeehn kphlvyrhrt ppanssgdwq tcntpdhdhs hkknkrkhwr rqwaessils
      241 dvemlkhsle vnsfsgdsnk tgtigekksh krtkrflsyp rfvevmvvad srmvayhgan
      301 lqhyvltlms ivasiykdps ignliniviv klvvihneqd gpaisynaqt tlknfcqwqq
      361 sqnhpegshl rhdtavlvtr qdicrahdkc dtlglaelgt vcdpyrscsi sednglstaf
      421 tiahelghvf nmphddnqkc kedggrnqqh vmaptlnfyt npwmwskcsr kyitefldtg
      481 ygeclldeps srtytlpqql pgliydvnkq celifgpgsq vcpymqmqcr rlwcinvdga
      541 hkgcrtqhtp wadgtecepg khcrfgvcvp kereapvtdg awgswspfgt csrtcgggik
      601 tairecnrpe pknggkycvg rrmkfkscnt epcsklkkdf rdeqcadfdg thfninglpt
      661 nvrwvpkysg ilmkdrcklf crvagstayy qlqdrvidgt pcgpdtndic vqglcrqagc
      721 dhvlnskarr dkcgvcggdn sscktvagtf ntvhygynvv vripagatni dvrqhsysgk
      781 peddnylals nsqgdfilng dfvvsmfkre ikvgnaviey sgsdntveri nstdrieqei
      841 tlqvlsvgnl ynpdvrytfn ipiedkpqqf ywnehgpwqp csklcqgerk rkpvckresd
      901 qltvsdqrcd ripqpdpste pcntecelrw hiarksecta qcglgyrtle iycskysrle
      961 gkiekvddrf cnsqakpstr ekctgdcnvg gwrysawtec skscgggtrr rramcvntyn
     1021 dvlddskcsq qekltvqrcs dfscpqwktg dwseclvtcg kghkhrqtwc qfgedrlndr
     1081 fcdpktkpes vqmcqqqeca swqvgpwgqc tvtcgqgyqm ravkcvvgty vsvvddnecn
     1141 aatrptdtqd ceiavcpshp nspeaqrais gihrtqwrfg swtpcsatcg kgtrmryvsc
     1201 rddqgsvade sacfhlpkps atemctvtpc gqwkalewss csvtcgqgka trqvicinys
     1261 dqlvdrsecd pddlpateqd csmspchpns hdygrpippf lypdhrlkph pggspnrnra
     1321 hipggnqwri gpwgacsstc aggfqrrvvv cqdengytan ncdekskpme qrscesgpcp
     1381 qwaygnwgec tkpcgagtrt rlvvcqrpng erftdlscei ldkppdreqc nvqdcprdaa
     1441 wsagpwspcs vscgrgqkhr svyclskegr hveeenckhl akpnvqkkcr ggrcpkwkag
     1501 dwgqcsvscg rgvqrrsvqc hggaakaaee aecdpasrpp pqrdchlpac pthrwaagew
     1561 qactktcgea srfrevlcvd ekeqlqssgr ceaserppev escglppcey iwitgewsec
     1621 svtcgkgyrq rlvscseiyt gkdhyeygyq nmvncpgtqp pniqpcylge cpisaswrvg
     1681 nwgscsvtcg vgvmhrsvqc ltnddqvssl chvdlkpeer rtchnvhecd lprsckdvkn
     1741 lkgvtedgey flqvkgktlk vycsgmqtds pkeyvtlvng daenfsevyg yrlhnptecp
     1801 yngsrredcq crkdytaagf stfskvrldl ntmqiittdl qfaqthdgrp vpyatagdcy
     1861 saakcpqgrf sidlygtgls lvgtakwlsq gnyavseiqk spdgtkvvgr cggycgkctp
     1921 ssgtgldiqv l
//
LOCUS       XP_041316191            1930 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 9
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041316191
VERSION     XP_041316191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1930
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X2"
                     /calculated_mol_wt=215518
     Region          42..196
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          281..486
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(424..425,428,434)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          501..568
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          581..633
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          638..742
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          744..861
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          875..922
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          929..983
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          991..1043
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1046..1098
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1101..1155
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1176..1229
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1232..1285
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1327..1378
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1381..1434
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1440..1493
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1496..1549
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1554..1607
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1611..1670
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1676..1728
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1731..1929
                     /region_name="GON"
                     /note="GON domain; pfam08685"
                     /db_xref="CDD:462559"
     CDS             1..1930
                     /gene="ADAMTS9"
                     /coded_by="XM_041460257.1:722..6514"
                     /db_xref="GeneID:121349625"
ORIGIN      
        1 mqlaplalal ttlfidglrt garrqklhpr qaqlleklse yeivtptrvn efgepfptdv
       61 hfrrrrrsts aapdawtaav adspkahyrl safgqqflfn ltassafiap lftvsllgep
      121 aadqrrlyae aadadvkhcf yrghvnarpr ltavislcsg mlgtfksddg dyfvepllsl
      181 eeqeyeeehn kphlvyrhrt ppanssgdwq tcntpdhdhs hkknkrkhwr rqwaessils
      241 dvemlkhsle vnsfsgdsnk tgtigekksh krtkrflsyp rfvevmvvad srmvayhgan
      301 lqhyvltlms ivasiykdps ignliniviv klvvihneqd gpaisynaqt tlknfcqwqq
      361 sqnhpegshl rhdtavlvtr qdicrahdkc dtlglaelgt vcdpyrscsi sednglstaf
      421 tiahelghvf nmphddnqkc kedggrnqqh vmaptlnfyt npwmwskcsr kyitefldtg
      481 ygeclldeps srtytlpqql pgliydvnkq celifgpgsq vcpymmqcrr lwcinvdgah
      541 kgcrtqhtpw adgtecepgk hcrfgvcvpk ereapvtdga wgswspfgtc srtcgggikt
      601 airecnrpep knggkycvgr rmkfkscnte pcsklkkdfr deqcadfdgt hfninglptn
      661 vrwvpkysgi lmkdrcklfc rvagstayyq lqdrvidgtp cgpdtndicv qglcrqagcd
      721 hvlnskarrd kcgvcggdns scktvagtfn tvhygynvvv ripagatnid vrqhsysgkp
      781 eddnylalsn sqgdfilngd fvvsmfkrei kvgnavieys gsdntverin stdrieqeit
      841 lqvlsvgnly npdvrytfni piedkpqqfy wnehgpwqpc sklcqgerkr kpvckresdq
      901 ltvsdqrcdr ipqpdpstep cntecelrwh iarksectaq cglgyrtlei ycskysrleg
      961 kiekvddrfc nsqakpstre kctgdcnvgg wrysawtecs kscgggtrrr ramcvntynd
     1021 vlddskcsqq ekltvqrcsd fscpqwktgd wseclvtcgk ghkhrqtwcq fgedrlndrf
     1081 cdpktkpesv qmcqqqecas wqvgpwgqct vtcgqgyqmr avkcvvgtyv svvddnecna
     1141 atrptdtqdc eiavcpshpn speaqraisg ihrtqwrfgs wtpcsatcgk gtrmryvscr
     1201 ddqgsvades acfhlpkpsa temctvtpcg qwkalewssc svtcgqgkat rqvicinysd
     1261 qlvdrsecdp ddlpateqdc smspchpnsh dygrpippfl ypdhrlkphp ggspnrnrah
     1321 ipggnqwrig pwgacsstca ggfqrrvvvc qdengytann cdekskpmeq rscesgpcpq
     1381 waygnwgect kpcgagtrtr lvvcqrpnge rftdlsceil dkppdreqcn vqdcprdaaw
     1441 sagpwspcsv scgrgqkhrs vyclskegrh veeenckhla kpnvqkkcrg grcpkwkagd
     1501 wgqcsvscgr gvqrrsvqch ggaakaaeea ecdpasrppp qrdchlpacp thrwaagewq
     1561 actktcgeas rfrevlcvde keqlqssgrc easerppeve scglppceyi witgewsecs
     1621 vtcgkgyrqr lvscseiytg kdhyeygyqn mvncpgtqpp niqpcylgec pisaswrvgn
     1681 wgscsvtcgv gvmhrsvqcl tnddqvsslc hvdlkpeerr tchnvhecdl prsckdvknl
     1741 kgvtedgeyf lqvkgktlkv ycsgmqtdsp keyvtlvngd aenfsevygy rlhnptecpy
     1801 ngsrredcqc rkdytaagfs tfskvrldln tmqiittdlq faqthdgrpv pyatagdcys
     1861 aakcpqgrfs idlygtglsl vgtakwlsqg nyavseiqks pdgtkvvgrc ggycgkctps
     1921 sgtgldiqvl
//
LOCUS       XP_041316199            1875 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 9
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041316199
VERSION     XP_041316199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460265.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1875
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X3"
                     /calculated_mol_wt=209322
     Region          42..196
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          281..486
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(424..425,428,434)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          501..569
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          582..634
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          639..743
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          745..862
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          876..923
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          930..984
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          992..1044
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1047..1099
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1102..1156
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1177..1230
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1233..1286
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1328..1379
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1382..1435
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1441..1494
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1499..1552
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1556..1615
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1621..1673
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1676..1874
                     /region_name="GON"
                     /note="GON domain; pfam08685"
                     /db_xref="CDD:462559"
     CDS             1..1875
                     /gene="ADAMTS9"
                     /coded_by="XM_041460265.1:722..6349"
                     /db_xref="GeneID:121349625"
ORIGIN      
        1 mqlaplalal ttlfidglrt garrqklhpr qaqlleklse yeivtptrvn efgepfptdv
       61 hfrrrrrsts aapdawtaav adspkahyrl safgqqflfn ltassafiap lftvsllgep
      121 aadqrrlyae aadadvkhcf yrghvnarpr ltavislcsg mlgtfksddg dyfvepllsl
      181 eeqeyeeehn kphlvyrhrt ppanssgdwq tcntpdhdhs hkknkrkhwr rqwaessils
      241 dvemlkhsle vnsfsgdsnk tgtigekksh krtkrflsyp rfvevmvvad srmvayhgan
      301 lqhyvltlms ivasiykdps ignliniviv klvvihneqd gpaisynaqt tlknfcqwqq
      361 sqnhpegshl rhdtavlvtr qdicrahdkc dtlglaelgt vcdpyrscsi sednglstaf
      421 tiahelghvf nmphddnqkc kedggrnqqh vmaptlnfyt npwmwskcsr kyitefldtg
      481 ygeclldeps srtytlpqql pgliydvnkq celifgpgsq vcpymqmqcr rlwcinvdga
      541 hkgcrtqhtp wadgtecepg khcrfgvcvp kereapvtdg awgswspfgt csrtcgggik
      601 tairecnrpe pknggkycvg rrmkfkscnt epcsklkkdf rdeqcadfdg thfninglpt
      661 nvrwvpkysg ilmkdrcklf crvagstayy qlqdrvidgt pcgpdtndic vqglcrqagc
      721 dhvlnskarr dkcgvcggdn sscktvagtf ntvhygynvv vripagatni dvrqhsysgk
      781 peddnylals nsqgdfilng dfvvsmfkre ikvgnaviey sgsdntveri nstdrieqei
      841 tlqvlsvgnl ynpdvrytfn ipiedkpqqf ywnehgpwqp csklcqgerk rkpvckresd
      901 qltvsdqrcd ripqpdpste pcntecelrw hiarksecta qcglgyrtle iycskysrle
      961 gkiekvddrf cnsqakpstr ekctgdcnvg gwrysawtec skscgggtrr rramcvntyn
     1021 dvlddskcsq qekltvqrcs dfscpqwktg dwseclvtcg kghkhrqtwc qfgedrlndr
     1081 fcdpktkpes vqmcqqqeca swqvgpwgqc tvtcgqgyqm ravkcvvgty vsvvddnecn
     1141 aatrptdtqd ceiavcpshp nspeaqrais gihrtqwrfg swtpcsatcg kgtrmryvsc
     1201 rddqgsvade sacfhlpkps atemctvtpc gqwkalewss csvtcgqgka trqvicinys
     1261 dqlvdrsecd pddlpateqd csmspchpns hdygrpippf lypdhrlkph pggspnrnra
     1321 hipggnqwri gpwgacsstc aggfqrrvvv cqdengytan ncdekskpme qrscesgpcp
     1381 qwaygnwgec tkpcgagtrt rlvvcqrpng erftdlscei ldkppdreqc nvqdcprdaa
     1441 wsagpwspcs vscgrgvqrr svqchggaak aaeeaecdpa srpppqrdch lpacpthrwa
     1501 agewqactkt cgeasrfrev lcvdekeqlq ssgrceaser ppevescglp pceyiwitge
     1561 wsecsvtcgk gyrqrlvscs eiytgkdhye ygyqnmvncp gtqppniqpc ylgecpisas
     1621 wrvgnwgscs vtcgvgvmhr svqcltnddq vsslchvdlk peerrtchnv hecdlprsck
     1681 dvknlkgvte dgeyflqvkg ktlkvycsgm qtdspkeyvt lvngdaenfs evygyrlhnp
     1741 tecpyngsrr edcqcrkdyt aagfstfskv rldlntmqii ttdlqfaqth dgrpvpyata
     1801 gdcysaakcp qgrfsidlyg tglslvgtak wlsqgnyavs eiqkspdgtk vvgrcggycg
     1861 kctpssgtgl diqvl
//
LOCUS       XP_041316212            1817 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 9
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041316212
VERSION     XP_041316212.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460278.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1817
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X4"
                     /calculated_mol_wt=203157
     Region          42..196
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          281..486
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(424..425,428,434)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          501..569
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          582..634
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          639..743
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          745..862
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          876..923
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          930..984
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          992..1044
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1047..1099
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1102..1156
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1177..1230
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1233..1286
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1328..1379
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1382..1435
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1441..1494
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1498..1557
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1563..1615
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1618..1816
                     /region_name="GON"
                     /note="GON domain; pfam08685"
                     /db_xref="CDD:462559"
     CDS             1..1817
                     /gene="ADAMTS9"
                     /coded_by="XM_041460278.1:722..6175"
                     /db_xref="GeneID:121349625"
ORIGIN      
        1 mqlaplalal ttlfidglrt garrqklhpr qaqlleklse yeivtptrvn efgepfptdv
       61 hfrrrrrsts aapdawtaav adspkahyrl safgqqflfn ltassafiap lftvsllgep
      121 aadqrrlyae aadadvkhcf yrghvnarpr ltavislcsg mlgtfksddg dyfvepllsl
      181 eeqeyeeehn kphlvyrhrt ppanssgdwq tcntpdhdhs hkknkrkhwr rqwaessils
      241 dvemlkhsle vnsfsgdsnk tgtigekksh krtkrflsyp rfvevmvvad srmvayhgan
      301 lqhyvltlms ivasiykdps ignliniviv klvvihneqd gpaisynaqt tlknfcqwqq
      361 sqnhpegshl rhdtavlvtr qdicrahdkc dtlglaelgt vcdpyrscsi sednglstaf
      421 tiahelghvf nmphddnqkc kedggrnqqh vmaptlnfyt npwmwskcsr kyitefldtg
      481 ygeclldeps srtytlpqql pgliydvnkq celifgpgsq vcpymqmqcr rlwcinvdga
      541 hkgcrtqhtp wadgtecepg khcrfgvcvp kereapvtdg awgswspfgt csrtcgggik
      601 tairecnrpe pknggkycvg rrmkfkscnt epcsklkkdf rdeqcadfdg thfninglpt
      661 nvrwvpkysg ilmkdrcklf crvagstayy qlqdrvidgt pcgpdtndic vqglcrqagc
      721 dhvlnskarr dkcgvcggdn sscktvagtf ntvhygynvv vripagatni dvrqhsysgk
      781 peddnylals nsqgdfilng dfvvsmfkre ikvgnaviey sgsdntveri nstdrieqei
      841 tlqvlsvgnl ynpdvrytfn ipiedkpqqf ywnehgpwqp csklcqgerk rkpvckresd
      901 qltvsdqrcd ripqpdpste pcntecelrw hiarksecta qcglgyrtle iycskysrle
      961 gkiekvddrf cnsqakpstr ekctgdcnvg gwrysawtec skscgggtrr rramcvntyn
     1021 dvlddskcsq qekltvqrcs dfscpqwktg dwseclvtcg kghkhrqtwc qfgedrlndr
     1081 fcdpktkpes vqmcqqqeca swqvgpwgqc tvtcgqgyqm ravkcvvgty vsvvddnecn
     1141 aatrptdtqd ceiavcpshp nspeaqrais gihrtqwrfg swtpcsatcg kgtrmryvsc
     1201 rddqgsvade sacfhlpkps atemctvtpc gqwkalewss csvtcgqgka trqvicinys
     1261 dqlvdrsecd pddlpateqd csmspchpns hdygrpippf lypdhrlkph pggspnrnra
     1321 hipggnqwri gpwgacsstc aggfqrrvvv cqdengytan ncdekskpme qrscesgpcp
     1381 qwaygnwgec tkpcgagtrt rlvvcqrpng erftdlscei ldkppdreqc nvqdcprdaa
     1441 wsagpwspct ktcgeasrfr evlcvdekeq lqssgrceas erppevescg lppceyiwit
     1501 gewsecsvtc gkgyrqrlvs cseiytgkdh yeygyqnmvn cpgtqppniq pcylgecpis
     1561 aswrvgnwgs csvtcgvgvm hrsvqcltnd dqvsslchvd lkpeerrtch nvhecdlprs
     1621 ckdvknlkgv tedgeyflqv kgktlkvycs gmqtdspkey vtlvngdaen fsevygyrlh
     1681 nptecpyngs rredcqcrkd ytaagfstfs kvrldlntmq iittdlqfaq thdgrpvpya
     1741 tagdcysaak cpqgrfsidl ygtglslvgt akwlsqgnya vseiqkspdg tkvvgrcggy
     1801 cgkctpssgt gldiqvl
//
LOCUS       XP_041316222            1795 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 9
            isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041316222
VERSION     XP_041316222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1795
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X5"
                     /calculated_mol_wt=201100
     Region          42..196
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          281..486
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(424..425,428,434)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          501..569
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          582..634
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          639..743
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          745..862
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          876..923
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          930..984
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          992..1044
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1047..1099
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1102..1156
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1177..1230
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1233..1286
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1328..1379
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1382..1435
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1441..1494
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1497..1550
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1555..1608
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1612..1671
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1677..1729
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1732..>1792
                     /region_name="GON"
                     /note="GON domain; pfam08685"
                     /db_xref="CDD:462559"
     CDS             1..1795
                     /gene="ADAMTS9"
                     /coded_by="XM_041460288.1:722..6109"
                     /db_xref="GeneID:121349625"
ORIGIN      
        1 mqlaplalal ttlfidglrt garrqklhpr qaqlleklse yeivtptrvn efgepfptdv
       61 hfrrrrrsts aapdawtaav adspkahyrl safgqqflfn ltassafiap lftvsllgep
      121 aadqrrlyae aadadvkhcf yrghvnarpr ltavislcsg mlgtfksddg dyfvepllsl
      181 eeqeyeeehn kphlvyrhrt ppanssgdwq tcntpdhdhs hkknkrkhwr rqwaessils
      241 dvemlkhsle vnsfsgdsnk tgtigekksh krtkrflsyp rfvevmvvad srmvayhgan
      301 lqhyvltlms ivasiykdps ignliniviv klvvihneqd gpaisynaqt tlknfcqwqq
      361 sqnhpegshl rhdtavlvtr qdicrahdkc dtlglaelgt vcdpyrscsi sednglstaf
      421 tiahelghvf nmphddnqkc kedggrnqqh vmaptlnfyt npwmwskcsr kyitefldtg
      481 ygeclldeps srtytlpqql pgliydvnkq celifgpgsq vcpymqmqcr rlwcinvdga
      541 hkgcrtqhtp wadgtecepg khcrfgvcvp kereapvtdg awgswspfgt csrtcgggik
      601 tairecnrpe pknggkycvg rrmkfkscnt epcsklkkdf rdeqcadfdg thfninglpt
      661 nvrwvpkysg ilmkdrcklf crvagstayy qlqdrvidgt pcgpdtndic vqglcrqagc
      721 dhvlnskarr dkcgvcggdn sscktvagtf ntvhygynvv vripagatni dvrqhsysgk
      781 peddnylals nsqgdfilng dfvvsmfkre ikvgnaviey sgsdntveri nstdrieqei
      841 tlqvlsvgnl ynpdvrytfn ipiedkpqqf ywnehgpwqp csklcqgerk rkpvckresd
      901 qltvsdqrcd ripqpdpste pcntecelrw hiarksecta qcglgyrtle iycskysrle
      961 gkiekvddrf cnsqakpstr ekctgdcnvg gwrysawtec skscgggtrr rramcvntyn
     1021 dvlddskcsq qekltvqrcs dfscpqwktg dwseclvtcg kghkhrqtwc qfgedrlndr
     1081 fcdpktkpes vqmcqqqeca swqvgpwgqc tvtcgqgyqm ravkcvvgty vsvvddnecn
     1141 aatrptdtqd ceiavcpshp nspeaqrais gihrtqwrfg swtpcsatcg kgtrmryvsc
     1201 rddqgsvade sacfhlpkps atemctvtpc gqwkalewss csvtcgqgka trqvicinys
     1261 dqlvdrsecd pddlpateqd csmspchpns hdygrpippf lypdhrlkph pggspnrnra
     1321 hipggnqwri gpwgacsstc aggfqrrvvv cqdengytan ncdekskpme qrscesgpcp
     1381 qwaygnwgec tkpcgagtrt rlvvcqrpng erftdlscei ldkppdreqc nvqdcprdaa
     1441 wsagpwspcs vscgrgqkhr svyclskegr hveeenckhl akpnvqkkcr ggrcpkwkag
     1501 dwgqcsvscg rgvqrrsvqc hggaakaaee aecdpasrpp pqrdchlpac pthrwaagew
     1561 qactktcgea srfrevlcvd ekeqlqssgr ceaserppev escglppcey iwitgewsec
     1621 svtcgkgyrq rlvscseiyt gkdhyeygyq nmvncpgtqp pniqpcylge cpisaswrvg
     1681 nwgscsvtcg vgvmhrsvqc ltnddqvssl chvdlkpeer rtchnvhecd lprsckdvkn
     1741 lkgvtedgey flqvkgktlk vycsgmqtds pkeyvtlvng daenfsevyg yrvff
//
LOCUS       XP_041316231            1688 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 9
            isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041316231
VERSION     XP_041316231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1688
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 9 isoform X6"
                     /calculated_mol_wt=188012
     Region          38..243
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(181..182,185,191)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          258..326
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          339..391
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          396..500
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          502..619
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          633..680
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          687..741
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          749..801
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          804..856
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          859..913
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          934..987
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          990..1043
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1085..1136
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1139..1192
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1198..1251
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1254..1307
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1312..1365
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1369..1428
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1434..1486
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1489..1687
                     /region_name="GON"
                     /note="GON domain; pfam08685"
                     /db_xref="CDD:462559"
     CDS             1..1688
                     /gene="ADAMTS9"
                     /coded_by="XM_041460297.1:216..5282"
                     /db_xref="GeneID:121349625"
ORIGIN      
        1 mlkhslevns fsgdsnktgt igekkshkrt krflsyprfv evmvvadsrm vayhganlqh
       61 yvltlmsiva siykdpsign linivivklv vihneqdgpa isynaqttlk nfcqwqqsqn
      121 hpegshlrhd tavlvtrqdi crahdkcdtl glaelgtvcd pyrscsised nglstaftia
      181 helghvfnmp hddnqkcked ggrnqqhvma ptlnfytnpw mwskcsrkyi tefldtgyge
      241 clldepssrt ytlpqqlpgl iydvnkqcel ifgpgsqvcp ymqmqcrrlw cinvdgahkg
      301 crtqhtpwad gtecepgkhc rfgvcvpker eapvtdgawg swspfgtcsr tcgggiktai
      361 recnrpepkn ggkycvgrrm kfkscntepc sklkkdfrde qcadfdgthf ninglptnvr
      421 wvpkysgilm kdrcklfcrv agstayyqlq drvidgtpcg pdtndicvqg lcrqagcdhv
      481 lnskarrdkc gvcggdnssc ktvagtfntv hygynvvvri pagatnidvr qhsysgkped
      541 dnylalsnsq gdfilngdfv vsmfkreikv gnavieysgs dntverinst drieqeitlq
      601 vlsvgnlynp dvrytfnipi edkpqqfywn ehgpwqpcsk lcqgerkrkp vckresdqlt
      661 vsdqrcdrip qpdpstepcn tecelrwhia rksectaqcg lgyrtleiyc skysrlegki
      721 ekvddrfcns qakpstrekc tgdcnvggwr ysawtecsks cgggtrrrra mcvntyndvl
      781 ddskcsqqek ltvqrcsdfs cpqwktgdws eclvtcgkgh khrqtwcqfg edrlndrfcd
      841 pktkpesvqm cqqqecaswq vgpwgqctvt cgqgyqmrav kcvvgtyvsv vddnecnaat
      901 rptdtqdcei avcpshpnsp eaqraisgih rtqwrfgswt pcsatcgkgt rmryvscrdd
      961 qgsvadesac fhlpkpsate mctvtpcgqw kalewsscsv tcgqgkatrq vicinysdql
     1021 vdrsecdpdd lpateqdcsm spchpnshdy grpippflyp dhrlkphpgg spnrnrahip
     1081 ggnqwrigpw gacsstcagg fqrrvvvcqd engytanncd ekskpmeqrs cesgpcpqwa
     1141 ygnwgectkp cgagtrtrlv vcqrpngerf tdlsceildk ppdreqcnvq dcprdaawsa
     1201 gpwspcsvsc grgqkhrsvy clskegrhve eenckhlakp nvqkkcrggr cpkwkagdwg
     1261 qcsvscgrgv qrrsvqchgg aakaaeeaec dpasrpppqr dchlpacpth rwaagewqac
     1321 tktcgeasrf revlcvdeke qlqssgrcea serppevesc glppceyiwi tgewsecsvt
     1381 cgkgyrqrlv scseiytgkd hyeygyqnmv ncpgtqppni qpcylgecpi saswrvgnwg
     1441 scsvtcgvgv mhrsvqcltn ddqvsslchv dlkpeerrtc hnvhecdlpr sckdvknlkg
     1501 vtedgeyflq vkgktlkvyc sgmqtdspke yvtlvngdae nfsevygyrl hnptecpyng
     1561 srredcqcrk dytaagfstf skvrldlntm qiittdlqfa qthdgrpvpy atagdcysaa
     1621 kcpqgrfsid lygtglslvg takwlsqgny avseiqkspd gtkvvgrcgg ycgkctpssg
     1681 tgldiqvl
//
LOCUS       XP_041316252             207 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-7a [Pyrgilauda ruficollis].
ACCESSION   XP_041316252
VERSION     XP_041316252.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460318.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="ras-related protein Rab-7a"
                     /calculated_mol_wt=23376
     Region          9..179
                     /region_name="Rab7"
                     /note="Rab GTPase family 7 (Rab7); cd01862"
                     /db_xref="CDD:206655"
     Site            9..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206655"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206655"
     Site            order(17..23,33,35,40,66,125..126,128,155..157)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206655"
     Site            order(17,42,44..45,63,67,69..72,75..76,79)
                     /site_type="active"
                     /note="GDI interaction site [active]"
                     /db_xref="CDD:206655"
     Site            order(23..34,36..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206655"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206655"
     Site            order(38,42..49,56,58)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206655"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206655"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,173)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206655"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206655"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206655"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206655"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206655"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206655"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206655"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206655"
     Site            117..122
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206655"
     Site            125..128
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206655"
     Site            155..157
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206655"
     Site            171..179
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206655"
     CDS             1..207
                     /gene="RAB7A"
                     /coded_by="XM_041460318.1:127..750"
                     /db_xref="GeneID:121349658"
ORIGIN      
        1 mtsrkkvllk viilgdsgvg ktslmnqyvn kkfsnqykat igadfltkev mvddrlvtmq
       61 iwdtagqerf qslgvafyrg adccvlvfdv tapntfktld swrdefliqa sprdpenfpf
      121 vvlgnkidle nrqvttkraq awcysknnip yfetsakeai nveqafqtia rnalkqetev
      181 elynefpepi kldktdraka saescsc
//
LOCUS       XP_041316265            1658 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041316265
VERSION     XP_041316265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1658
                     /product="protein polybromo-1 isoform X1"
                     /calculated_mol_wt=189641
     Region          66..178
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(98,103,106,145,149,155)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          203..305
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(233,238,241,280,284,290)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          405..507
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(435,440,443,482,486,492)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          542..645
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(573,578,581,620,624,630)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          681..785
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(711,716,719,758,762,768)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          798..905
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(831,832,835,874,878,884)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          980..1097
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1179..1297
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1404..1461
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1404..1405,1407..1411,1414..1415,1422,1434..1435,
                     1438,1441..1442,1449,1453,1456,1460)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1658
                     /gene="PBRM1"
                     /coded_by="XM_041460331.1:86..5062"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlvnlkkld smgskrrrat spsssvsggd fddahhstnv pgpsrkrrrl
       61 snlptvdpia vchelyntir dykdeqgrll celfirapkr rnqpdyyevv sqpidlmkiq
      121 qklkmeeydd vnvltadfql lfnnakayyk pdspeykaac klwelylrtk nefvqkgdae
      181 eddddeeghd nqanselssp gylkeileql leavavatnp sgrliselfq klpskvqypd
      241 yyaiikepid lktisqriqn gtyksihama kdidllakna ktynepgsqv fkdanaikki
      301 fnmkkaeieh selaksslri rtasnlaask ltgpssqgkg svgdernssn kyyrnkrsaq
      361 gdrlsaitma lqygsesded aalaaaarye egeseaesit sfmdtsnply qlydtvrscr
      421 nnqgqlisep ffhlpskkky pdyyqqiktp islqqirtkl knheyetldq leadlnlmfe
      481 nakrynvpns aiykrvlkmq qvmqakkkel arrddiedgd smissatsdt gsskrkskkn
      541 irkqrmkily navlearepg tgrrlcdlfm vkpskkdypd yykiilepmd lkmiehnirn
      601 dkyaaeeami edmklmfrna rhyneegsqv yndahmleki lkekrkelgp laedddvasp
      661 klklsrksgi spkkskymtp mqqklnevye avknytdkrg rrlsaiflrl psrselpdyy
      721 vtikkpvdme kirshmmank yqdidsmved fvmmfnnact ynepesliyk dalvlhkvll
      781 etrreiegde dshvpnvtll iqelihnlfv svmshqddeg rcysdslaei pavdpnfpnk
      841 ppltfdiirk nvennryrrl dlfqenmfev lerarrmnrt dseiyedave lqqffikird
      901 elckngeill spalsyttkh lhndvekekk eklpkeieed klkreeekre aeksedssgs
      961 aglsnlhrty sqdcsfknsm yhvgdyvyve paeaslqphi vcierlweds agekwlygcw
     1021 fyrpnetfhl atrkflekev fksdyyskvp vskilgkcvv mfvkeyfklc penfrdedvy
     1081 vcesrysakt ksfkkiklwt mpvssvrfvp rdvplpvvrv asvfantdkv deekhsetle
     1141 dskvgesilh lekdkedvpv emsngepgch yfeqlcyndm wlkvgdcvfi kshglvrprv
     1201 griekmwvrd gaayffgpif ihpeetehep tkmfykkevf lsnleetcpm tcilgkcvvl
     1261 sfkdflscrp teisendvfl cesrynesdk qmkkfkglkr fslsakvvdd eiyyfrkpiv
     1321 pqkepsplle kkiqqleakf aeleggdedm edmgeeegdm tetpsmpqlq aplasdldim
     1381 pytppqstpk svkgstkkeg skrkinmsgy ilfssemrav ikaqhpdysf gelsrlvgte
     1441 wrnleatkka eyegmisgyp pvlpplqgpv dgivsmgsmq plhpgvppph qlppgmpgip
     1501 gipppgvigq nvspmvgtpa pgaspfgqqi gilgppgqqa pppypgqspa sqpvmqqpst
     1561 pmfvspppkt qrllhseayl kyieglsaes nsiskwdqtl aarrrdvhls keqesrlpsh
     1621 wlkskgahtt madalwrlrd lmlrdtlnir qaynlenv
//
LOCUS       XP_041316275            1657 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041316275
VERSION     XP_041316275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1657
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1657
                     /product="protein polybromo-1 isoform X2"
                     /calculated_mol_wt=189513
     Region          65..177
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(97,102,105,144,148,154)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          202..304
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(232,237,240,279,283,289)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          404..506
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(434,439,442,481,485,491)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          541..644
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(572,577,580,619,623,629)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          680..784
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(710,715,718,757,761,767)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          797..904
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(830,831,834,873,877,883)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          979..1096
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1178..1296
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1403..1460
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1403..1404,1406..1410,1413..1414,1421,1433..1434,
                     1437,1440..1441,1448,1452,1455,1459)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1657
                     /gene="PBRM1"
                     /coded_by="XM_041460341.1:86..5059"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlvnlklds mgskrrrats psssvsggdf ddahhstnvp gpsrkrrrls
       61 nlptvdpiav chelyntird ykdeqgrllc elfirapkrr nqpdyyevvs qpidlmkiqq
      121 klkmeeyddv nvltadfqll fnnakayykp dspeykaack lwelylrtkn efvqkgdaee
      181 ddddeeghdn qanselsspg ylkeileqll eavavatnps grliselfqk lpskvqypdy
      241 yaiikepidl ktisqriqng tyksihamak didllaknak tynepgsqvf kdanaikkif
      301 nmkkaeiehs elaksslrir tasnlaaskl tgpssqgkgs vgdernssnk yyrnkrsaqg
      361 drlsaitmal qygsesdeda alaaaaryee geseaesits fmdtsnplyq lydtvrscrn
      421 nqgqlisepf fhlpskkkyp dyyqqiktpi slqqirtklk nheyetldql eadlnlmfen
      481 akrynvpnsa iykrvlkmqq vmqakkkela rrddiedgds missatsdtg sskrkskkni
      541 rkqrmkilyn avlearepgt grrlcdlfmv kpskkdypdy ykiilepmdl kmiehnirnd
      601 kyaaeeamie dmklmfrnar hyneegsqvy ndahmlekil kekrkelgpl aedddvaspk
      661 lklsrksgis pkkskymtpm qqklnevyea vknytdkrgr rlsaiflrlp srselpdyyv
      721 tikkpvdmek irshmmanky qdidsmvedf vmmfnnacty nepesliykd alvlhkvlle
      781 trreiegded shvpnvtlli qelihnlfvs vmshqddegr cysdslaeip avdpnfpnkp
      841 pltfdiirkn vennryrrld lfqenmfevl erarrmnrtd seiyedavel qqffikirde
      901 lckngeills palsyttkhl hndvekekke klpkeieedk lkreeekrea eksedssgsa
      961 glsnlhrtys qdcsfknsmy hvgdyvyvep aeaslqphiv cierlwedsa gekwlygcwf
     1021 yrpnetfhla trkflekevf ksdyyskvpv skilgkcvvm fvkeyfklcp enfrdedvyv
     1081 cesrysaktk sfkkiklwtm pvssvrfvpr dvplpvvrva svfantdkvd eekhsetled
     1141 skvgesilhl ekdkedvpve msngepgchy feqlcyndmw lkvgdcvfik shglvrprvg
     1201 riekmwvrdg aayffgpifi hpeetehept kmfykkevfl snleetcpmt cilgkcvvls
     1261 fkdflscrpt eisendvflc esrynesdkq mkkfkglkrf slsakvvdde iyyfrkpivp
     1321 qkepspllek kiqqleakfa eleggdedme dmgeeegdmt etpsmpqlqa plasdldimp
     1381 ytppqstpks vkgstkkegs krkinmsgyi lfssemravi kaqhpdysfg elsrlvgtew
     1441 rnleatkkae yegmisgypp vlpplqgpvd givsmgsmqp lhpgvppphq lppgmpgipg
     1501 ipppgvigqn vspmvgtpap gaspfgqqig ilgppgqqap ppypgqspas qpvmqqpstp
     1561 mfvspppktq rllhseaylk yieglsaesn siskwdqtla arrrdvhlsk eqesrlpshw
     1621 lkskgahttm adalwrlrdl mlrdtlnirq aynlenv
//
LOCUS       XP_041316284            1655 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041316284
VERSION     XP_041316284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1655
                     /product="protein polybromo-1 isoform X3"
                     /calculated_mol_wt=189315
     Region          63..175
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(95,100,103,142,146,152)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          200..302
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(230,235,238,277,281,287)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          402..504
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(432,437,440,479,483,489)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          539..642
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(570,575,578,617,621,627)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          678..782
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(708,713,716,755,759,765)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          795..902
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(828,829,832,871,875,881)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          977..1094
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1176..1294
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1401..1458
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1401..1402,1404..1408,1411..1412,1419,1431..1432,
                     1435,1438..1439,1446,1450,1453,1457)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1655
                     /gene="PBRM1"
                     /coded_by="XM_041460350.1:86..5053"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlkkldsmg skrrratsps ssvsggdfdd ahhstnvpgp srkrrrlsnl
       61 ptvdpiavch elyntirdyk deqgrllcel firapkrrnq pdyyevvsqp idlmkiqqkl
      121 kmeeyddvnv ltadfqllfn nakayykpds peykaacklw elylrtknef vqkgdaeedd
      181 ddeeghdnqa nselsspgyl keileqllea vavatnpsgr liselfqklp skvqypdyya
      241 iikepidlkt isqriqngty ksihamakdi dllaknakty nepgsqvfkd anaikkifnm
      301 kkaeiehsel aksslrirta snlaaskltg pssqgkgsvg dernssnkyy rnkrsaqgdr
      361 lsaitmalqy gsesdedaal aaaaryeege seaesitsfm dtsnplyqly dtvrscrnnq
      421 gqlisepffh lpskkkypdy yqqiktpisl qqirtklknh eyetldqlea dlnlmfenak
      481 rynvpnsaiy krvlkmqqvm qakkkelarr ddiedgdsmi ssatsdtgss krkskknirk
      541 qrmkilynav learepgtgr rlcdlfmvkp skkdypdyyk iilepmdlkm iehnirndky
      601 aaeeamiedm klmfrnarhy neegsqvynd ahmlekilke krkelgplae dddvaspklk
      661 lsrksgispk kskymtpmqq klnevyeavk nytdkrgrrl saiflrlpsr selpdyyvti
      721 kkpvdmekir shmmankyqd idsmvedfvm mfnnactyne pesliykdal vlhkvlletr
      781 reiegdedsh vpnvtlliqe lihnlfvsvm shqddegrcy sdslaeipav dpnfpnkppl
      841 tfdiirknve nnryrrldlf qenmfevler arrmnrtdse iyedavelqq ffikirdelc
      901 kngeillspa lsyttkhlhn dvekekkekl pkeieedklk reeekreaek sedssgsagl
      961 snlhrtysqd csfknsmyhv gdyvyvepae aslqphivci erlwedsage kwlygcwfyr
     1021 pnetfhlatr kflekevfks dyyskvpvsk ilgkcvvmfv keyfklcpen frdedvyvce
     1081 srysaktksf kkiklwtmpv ssvrfvprdv plpvvrvasv fantdkvdee khsetledsk
     1141 vgesilhlek dkedvpvems ngepgchyfe qlcyndmwlk vgdcvfiksh glvrprvgri
     1201 ekmwvrdgaa yffgpifihp eeteheptkm fykkevflsn leetcpmtci lgkcvvlsfk
     1261 dflscrptei sendvflces rynesdkqmk kfkglkrfsl sakvvddeiy yfrkpivpqk
     1321 epspllekki qqleakfael eggdedmedm geeegdmtet psmpqlqapl asdldimpyt
     1381 ppqstpksvk gstkkegskr kinmsgyilf ssemravika qhpdysfgel srlvgtewrn
     1441 leatkkaeye gmisgyppvl pplqgpvdgi vsmgsmqplh pgvppphqlp pgmpgipgip
     1501 ppgvigqnvs pmvgtpapga spfgqqigil gppgqqappp ypgqspasqp vmqqpstpmf
     1561 vspppktqrl lhseaylkyi eglsaesnsi skwdqtlaar rrdvhlskeq esrlpshwlk
     1621 skgahttmad alwrlrdlml rdtlnirqay nlenv
//
LOCUS       XP_041316293            1654 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041316293
VERSION     XP_041316293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460359.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1654
                     /product="protein polybromo-1 isoform X4"
                     /calculated_mol_wt=189186
     Region          62..174
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(94,99,102,141,145,151)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          199..301
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(229,234,237,276,280,286)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          401..503
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(431,436,439,478,482,488)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          538..641
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(569,574,577,616,620,626)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          677..781
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(707,712,715,754,758,764)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          794..901
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(827,828,831,870,874,880)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          976..1093
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1175..1293
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1400..1457
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1400..1401,1403..1407,1410..1411,1418,1430..1431,
                     1434,1437..1438,1445,1449,1452,1456)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1654
                     /gene="PBRM1"
                     /coded_by="XM_041460359.1:86..5050"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlkldsmgs krrratspss svsggdfdda hhstnvpgps rkrrrlsnlp
       61 tvdpiavche lyntirdykd eqgrllcelf irapkrrnqp dyyevvsqpi dlmkiqqklk
      121 meeyddvnvl tadfqllfnn akayykpdsp eykaacklwe lylrtknefv qkgdaeeddd
      181 deeghdnqan selsspgylk eileqlleav avatnpsgrl iselfqklps kvqypdyyai
      241 ikepidlkti sqriqngtyk sihamakdid llaknaktyn epgsqvfkda naikkifnmk
      301 kaeiehsela ksslrirtas nlaaskltgp ssqgkgsvgd ernssnkyyr nkrsaqgdrl
      361 saitmalqyg sesdedaala aaaryeeges eaesitsfmd tsnplyqlyd tvrscrnnqg
      421 qlisepffhl pskkkypdyy qqiktpislq qirtklknhe yetldqlead lnlmfenakr
      481 ynvpnsaiyk rvlkmqqvmq akkkelarrd diedgdsmis satsdtgssk rkskknirkq
      541 rmkilynavl earepgtgrr lcdlfmvkps kkdypdyyki ilepmdlkmi ehnirndkya
      601 aeeamiedmk lmfrnarhyn eegsqvynda hmlekilkek rkelgplaed ddvaspklkl
      661 srksgispkk skymtpmqqk lnevyeavkn ytdkrgrrls aiflrlpsrs elpdyyvtik
      721 kpvdmekirs hmmankyqdi dsmvedfvmm fnnactynep esliykdalv lhkvlletrr
      781 eiegdedshv pnvtlliqel ihnlfvsvms hqddegrcys dslaeipavd pnfpnkpplt
      841 fdiirknven nryrrldlfq enmfevlera rrmnrtdsei yedavelqqf fikirdelck
      901 ngeillspal syttkhlhnd vekekkeklp keieedklkr eeekreaeks edssgsagls
      961 nlhrtysqdc sfknsmyhvg dyvyvepaea slqphivcie rlwedsagek wlygcwfyrp
     1021 netfhlatrk flekevfksd yyskvpvski lgkcvvmfvk eyfklcpenf rdedvyvces
     1081 rysaktksfk kiklwtmpvs svrfvprdvp lpvvrvasvf antdkvdeek hsetledskv
     1141 gesilhlekd kedvpvemsn gepgchyfeq lcyndmwlkv gdcvfikshg lvrprvgrie
     1201 kmwvrdgaay ffgpifihpe eteheptkmf ykkevflsnl eetcpmtcil gkcvvlsfkd
     1261 flscrpteis endvflcesr ynesdkqmkk fkglkrfsls akvvddeiyy frkpivpqke
     1321 pspllekkiq qleakfaele ggdedmedmg eeegdmtetp smpqlqapla sdldimpytp
     1381 pqstpksvkg stkkegskrk inmsgyilfs semravikaq hpdysfgels rlvgtewrnl
     1441 eatkkaeyeg misgyppvlp plqgpvdgiv smgsmqplhp gvppphqlpp gmpgipgipp
     1501 pgvigqnvsp mvgtpapgas pfgqqigilg ppgqqapppy pgqspasqpv mqqpstpmfv
     1561 spppktqrll hseaylkyie glsaesnsis kwdqtlaarr rdvhlskeqe srlpshwlks
     1621 kgahttmada lwrlrdlmlr dtlnirqayn lenv
//
LOCUS       XP_041316301            1625 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041316301
VERSION     XP_041316301.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460367.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1625
                     /product="protein polybromo-1 isoform X5"
                     /calculated_mol_wt=186158
     Region          66..178
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(98,103,106,145,149,155)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          203..305
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(233,238,241,280,284,290)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          372..474
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(402,407,410,449,453,459)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          509..612
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(540,545,548,587,591,597)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          648..752
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(678,683,686,725,729,735)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          765..872
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(798,799,802,841,845,851)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          947..1064
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1146..1264
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1371..1428
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1371..1372,1374..1378,1381..1382,1389,1401..1402,
                     1405,1408..1409,1416,1420,1423,1427)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1625
                     /gene="PBRM1"
                     /coded_by="XM_041460367.1:86..4963"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlvnlkkld smgskrrrat spsssvsggd fddahhstnv pgpsrkrrrl
       61 snlptvdpia vchelyntir dykdeqgrll celfirapkr rnqpdyyevv sqpidlmkiq
      121 qklkmeeydd vnvltadfql lfnnakayyk pdspeykaac klwelylrtk nefvqkgdae
      181 eddddeeghd nqanselssp gylkeileql leavavatnp sgrliselfq klpskvqypd
      241 yyaiikepid lktisqriqn gtyksihama kdidllakna ktynepgsqv fkdanaikki
      301 fnmkkaeieh selaksslri snkrsaqgdr lsaitmalqy gsesdedaal aaaaryeege
      361 seaesitsfm dtsnplyqly dtvrscrnnq gqlisepffh lpskkkypdy yqqiktpisl
      421 qqirtklknh eyetldqlea dlnlmfenak rynvpnsaiy krvlkmqqvm qakkkelarr
      481 ddiedgdsmi ssatsdtgss krkskknirk qrmkilynav learepgtgr rlcdlfmvkp
      541 skkdypdyyk iilepmdlkm iehnirndky aaeeamiedm klmfrnarhy neegsqvynd
      601 ahmlekilke krkelgplae dddvaspklk lsrksgispk kskymtpmqq klnevyeavk
      661 nytdkrgrrl saiflrlpsr selpdyyvti kkpvdmekir shmmankyqd idsmvedfvm
      721 mfnnactyne pesliykdal vlhkvlletr reiegdedsh vpnvtlliqe lihnlfvsvm
      781 shqddegrcy sdslaeipav dpnfpnkppl tfdiirknve nnryrrldlf qenmfevler
      841 arrmnrtdse iyedavelqq ffikirdelc kngeillspa lsyttkhlhn dvekekkekl
      901 pkeieedklk reeekreaek sedssgsagl snlhrtysqd csfknsmyhv gdyvyvepae
      961 aslqphivci erlwedsage kwlygcwfyr pnetfhlatr kflekevfks dyyskvpvsk
     1021 ilgkcvvmfv keyfklcpen frdedvyvce srysaktksf kkiklwtmpv ssvrfvprdv
     1081 plpvvrvasv fantdkvdee khsetledsk vgesilhlek dkedvpvems ngepgchyfe
     1141 qlcyndmwlk vgdcvfiksh glvrprvgri ekmwvrdgaa yffgpifihp eeteheptkm
     1201 fykkevflsn leetcpmtci lgkcvvlsfk dflscrptei sendvflces rynesdkqmk
     1261 kfkglkrfsl sakvvddeiy yfrkpivpqk epspllekki qqleakfael eggdedmedm
     1321 geeegdmtet psmpqlqapl asdldimpyt ppqstpksvk gstkkegskr kinmsgyilf
     1381 ssemravika qhpdysfgel srlvgtewrn leatkkaeye gmisgyppvl pplqgpvdgi
     1441 vsmgsmqplh pgvppphqlp pgmpgipgip ppgvigqnvs pmvgtpapga spfgqqigil
     1501 gppgqqappp ypgqspasqp vmqqpstpmf vspppktqrl lhseaylkyi eglsaesnsi
     1561 skwdqtlaar rrdvhlskeq esrlpshwlk skgahttmad alwrlrdlml rdtlnirqay
     1621 nlenv
//
LOCUS       XP_041316307            1622 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041316307
VERSION     XP_041316307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1622
                     /product="protein polybromo-1 isoform X6"
                     /calculated_mol_wt=185832
     Region          63..175
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(95,100,103,142,146,152)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          200..302
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(230,235,238,277,281,287)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          369..471
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(399,404,407,446,450,456)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          506..609
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(537,542,545,584,588,594)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          645..749
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(675,680,683,722,726,732)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          762..869
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(795,796,799,838,842,848)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          944..1061
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1143..1261
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1368..1425
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1368..1369,1371..1375,1378..1379,1386,1398..1399,
                     1402,1405..1406,1413,1417,1420,1424)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1622
                     /gene="PBRM1"
                     /coded_by="XM_041460373.1:86..4954"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlkkldsmg skrrratsps ssvsggdfdd ahhstnvpgp srkrrrlsnl
       61 ptvdpiavch elyntirdyk deqgrllcel firapkrrnq pdyyevvsqp idlmkiqqkl
      121 kmeeyddvnv ltadfqllfn nakayykpds peykaacklw elylrtknef vqkgdaeedd
      181 ddeeghdnqa nselsspgyl keileqllea vavatnpsgr liselfqklp skvqypdyya
      241 iikepidlkt isqriqngty ksihamakdi dllaknakty nepgsqvfkd anaikkifnm
      301 kkaeiehsel aksslrisnk rsaqgdrlsa itmalqygse sdedaalaaa aryeegesea
      361 esitsfmdts nplyqlydtv rscrnnqgql isepffhlps kkkypdyyqq iktpislqqi
      421 rtklknheye tldqleadln lmfenakryn vpnsaiykrv lkmqqvmqak kkelarrddi
      481 edgdsmissa tsdtgsskrk skknirkqrm kilynavlea repgtgrrlc dlfmvkpskk
      541 dypdyykiil epmdlkmieh nirndkyaae eamiedmklm frnarhynee gsqvyndahm
      601 lekilkekrk elgplaeddd vaspklklsr ksgispkksk ymtpmqqkln evyeavknyt
      661 dkrgrrlsai flrlpsrsel pdyyvtikkp vdmekirshm mankyqdids mvedfvmmfn
      721 nactynepes liykdalvlh kvlletrrei egdedshvpn vtlliqelih nlfvsvmshq
      781 ddegrcysds laeipavdpn fpnkppltfd iirknvennr yrrldlfqen mfevlerarr
      841 mnrtdseiye davelqqffi kirdelckng eillspalsy ttkhlhndve kekkeklpke
      901 ieedklkree ekreaeksed ssgsaglsnl hrtysqdcsf knsmyhvgdy vyvepaeasl
      961 qphivcierl wedsagekwl ygcwfyrpne tfhlatrkfl ekevfksdyy skvpvskilg
     1021 kcvvmfvkey fklcpenfrd edvyvcesry saktksfkki klwtmpvssv rfvprdvplp
     1081 vvrvasvfan tdkvdeekhs etledskvge silhlekdke dvpvemsnge pgchyfeqlc
     1141 yndmwlkvgd cvfikshglv rprvgriekm wvrdgaayff gpifihpeet eheptkmfyk
     1201 kevflsnlee tcpmtcilgk cvvlsfkdfl scrpteisen dvflcesryn esdkqmkkfk
     1261 glkrfslsak vvddeiyyfr kpivpqkeps pllekkiqql eakfaelegg dedmedmgee
     1321 egdmtetpsm pqlqaplasd ldimpytppq stpksvkgst kkegskrkin msgyilfsse
     1381 mravikaqhp dysfgelsrl vgtewrnlea tkkaeyegmi sgyppvlppl qgpvdgivsm
     1441 gsmqplhpgv ppphqlppgm pgipgipppg vigqnvspmv gtpapgaspf gqqigilgpp
     1501 gqqapppypg qspasqpvmq qpstpmfvsp ppktqrllhs eaylkyiegl saesnsiskw
     1561 dqtlaarrrd vhlskeqesr lpshwlkskg ahttmadalw rlrdlmlrdt lnirqaynle
     1621 nv
//
LOCUS       XP_041316316            1606 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041316316
VERSION     XP_041316316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1606
                     /product="protein polybromo-1 isoform X7"
                     /calculated_mol_wt=184452
     Region          66..178
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(98,103,106,145,149,155)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          203..305
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(233,238,241,280,284,290)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          405..507
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(435,440,443,482,486,492)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          542..645
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(573,578,581,620,624,630)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          681..785
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(711,716,719,758,762,768)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          798..905
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(831,832,835,874,878,884)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          980..1097
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1179..1297
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1404..1454
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1404..1405,1407..1411,1414..1415,1422,1434..1435,
                     1438,1441..1442,1449,1453)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1606
                     /gene="PBRM1"
                     /coded_by="XM_041460382.1:65..4885"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlvnlkkld smgskrrrat spsssvsggd fddahhstnv pgpsrkrrrl
       61 snlptvdpia vchelyntir dykdeqgrll celfirapkr rnqpdyyevv sqpidlmkiq
      121 qklkmeeydd vnvltadfql lfnnakayyk pdspeykaac klwelylrtk nefvqkgdae
      181 eddddeeghd nqanselssp gylkeileql leavavatnp sgrliselfq klpskvqypd
      241 yyaiikepid lktisqriqn gtyksihama kdidllakna ktynepgsqv fkdanaikki
      301 fnmkkaeieh selaksslri rtasnlaask ltgpssqgkg svgdernssn kyyrnkrsaq
      361 gdrlsaitma lqygsesded aalaaaarye egeseaesit sfmdtsnply qlydtvrscr
      421 nnqgqlisep ffhlpskkky pdyyqqiktp islqqirtkl knheyetldq leadlnlmfe
      481 nakrynvpns aiykrvlkmq qvmqakkkel arrddiedgd smissatsdt gsskrkskkn
      541 irkqrmkily navlearepg tgrrlcdlfm vkpskkdypd yykiilepmd lkmiehnirn
      601 dkyaaeeami edmklmfrna rhyneegsqv yndahmleki lkekrkelgp laedddvasp
      661 klklsrksgi spkkskymtp mqqklnevye avknytdkrg rrlsaiflrl psrselpdyy
      721 vtikkpvdme kirshmmank yqdidsmved fvmmfnnact ynepesliyk dalvlhkvll
      781 etrreiegde dshvpnvtll iqelihnlfv svmshqddeg rcysdslaei pavdpnfpnk
      841 ppltfdiirk nvennryrrl dlfqenmfev lerarrmnrt dseiyedave lqqffikird
      901 elckngeill spalsyttkh lhndvekekk eklpkeieed klkreeekre aeksedssgs
      961 aglsnlhrty sqdcsfknsm yhvgdyvyve paeaslqphi vcierlweds agekwlygcw
     1021 fyrpnetfhl atrkflekev fksdyyskvp vskilgkcvv mfvkeyfklc penfrdedvy
     1081 vcesrysakt ksfkkiklwt mpvssvrfvp rdvplpvvrv asvfantdkv deekhsetle
     1141 dskvgesilh lekdkedvpv emsngepgch yfeqlcyndm wlkvgdcvfi kshglvrprv
     1201 griekmwvrd gaayffgpif ihpeetehep tkmfykkevf lsnleetcpm tcilgkcvvl
     1261 sfkdflscrp teisendvfl cesrynesdk qmkkfkglkr fslsakvvdd eiyyfrkpiv
     1321 pqkepsplle kkiqqleakf aeleggdedm edmgeeegdm tetpsmpqlq aplasdldim
     1381 pytppqstpk svkgstkkeg skrkinmsgy ilfssemrav ikaqhpdysf gelsrlvgte
     1441 wrnleatkka eyegvigqnv spmvgtpapg aspfgqqigi lgppgqqapp pypgqspasq
     1501 pvmqqpstpm fvspppktqr llhseaylky ieglsaesns iskwdqtlaa rrrdvhlske
     1561 qesrlpshwl kskgahttma dalwrlrdlm lrdtlnirqa ynlenv
//
LOCUS       XP_041316322            1603 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041316322
VERSION     XP_041316322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1603
                     /product="protein polybromo-1 isoform X8"
                     /calculated_mol_wt=184125
     Region          63..175
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(95,100,103,142,146,152)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          200..302
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(230,235,238,277,281,287)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          402..504
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(432,437,440,479,483,489)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          539..642
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(570,575,578,617,621,627)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          678..782
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(708,713,716,755,759,765)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          795..902
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(828,829,832,871,875,881)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          977..1094
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1176..1294
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1401..1451
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1401..1402,1404..1408,1411..1412,1419,1431..1432,
                     1435,1438..1439,1446,1450)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1603
                     /gene="PBRM1"
                     /coded_by="XM_041460388.1:86..4897"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlkkldsmg skrrratsps ssvsggdfdd ahhstnvpgp srkrrrlsnl
       61 ptvdpiavch elyntirdyk deqgrllcel firapkrrnq pdyyevvsqp idlmkiqqkl
      121 kmeeyddvnv ltadfqllfn nakayykpds peykaacklw elylrtknef vqkgdaeedd
      181 ddeeghdnqa nselsspgyl keileqllea vavatnpsgr liselfqklp skvqypdyya
      241 iikepidlkt isqriqngty ksihamakdi dllaknakty nepgsqvfkd anaikkifnm
      301 kkaeiehsel aksslrirta snlaaskltg pssqgkgsvg dernssnkyy rnkrsaqgdr
      361 lsaitmalqy gsesdedaal aaaaryeege seaesitsfm dtsnplyqly dtvrscrnnq
      421 gqlisepffh lpskkkypdy yqqiktpisl qqirtklknh eyetldqlea dlnlmfenak
      481 rynvpnsaiy krvlkmqqvm qakkkelarr ddiedgdsmi ssatsdtgss krkskknirk
      541 qrmkilynav learepgtgr rlcdlfmvkp skkdypdyyk iilepmdlkm iehnirndky
      601 aaeeamiedm klmfrnarhy neegsqvynd ahmlekilke krkelgplae dddvaspklk
      661 lsrksgispk kskymtpmqq klnevyeavk nytdkrgrrl saiflrlpsr selpdyyvti
      721 kkpvdmekir shmmankyqd idsmvedfvm mfnnactyne pesliykdal vlhkvlletr
      781 reiegdedsh vpnvtlliqe lihnlfvsvm shqddegrcy sdslaeipav dpnfpnkppl
      841 tfdiirknve nnryrrldlf qenmfevler arrmnrtdse iyedavelqq ffikirdelc
      901 kngeillspa lsyttkhlhn dvekekkekl pkeieedklk reeekreaek sedssgsagl
      961 snlhrtysqd csfknsmyhv gdyvyvepae aslqphivci erlwedsage kwlygcwfyr
     1021 pnetfhlatr kflekevfks dyyskvpvsk ilgkcvvmfv keyfklcpen frdedvyvce
     1081 srysaktksf kkiklwtmpv ssvrfvprdv plpvvrvasv fantdkvdee khsetledsk
     1141 vgesilhlek dkedvpvems ngepgchyfe qlcyndmwlk vgdcvfiksh glvrprvgri
     1201 ekmwvrdgaa yffgpifihp eeteheptkm fykkevflsn leetcpmtci lgkcvvlsfk
     1261 dflscrptei sendvflces rynesdkqmk kfkglkrfsl sakvvddeiy yfrkpivpqk
     1321 epspllekki qqleakfael eggdedmedm geeegdmtet psmpqlqapl asdldimpyt
     1381 ppqstpksvk gstkkegskr kinmsgyilf ssemravika qhpdysfgel srlvgtewrn
     1441 leatkkaeye gvigqnvspm vgtpapgasp fgqqigilgp pgqqapppyp gqspasqpvm
     1501 qqpstpmfvs pppktqrllh seaylkyieg lsaesnsisk wdqtlaarrr dvhlskeqes
     1561 rlpshwlksk gahttmadal wrlrdlmlrd tlnirqaynl env
//
LOCUS       XP_041316331            1602 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041316331
VERSION     XP_041316331.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460397.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1602
                     /product="protein polybromo-1 isoform X9"
                     /calculated_mol_wt=183997
     Region          62..174
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(94,99,102,141,145,151)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          199..301
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(229,234,237,276,280,286)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          401..503
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(431,436,439,478,482,488)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          538..641
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(569,574,577,616,620,626)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          677..781
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(707,712,715,754,758,764)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          794..901
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(827,828,831,870,874,880)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          976..1093
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1175..1293
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1400..1450
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1400..1401,1403..1407,1410..1411,1418,1430..1431,
                     1434,1437..1438,1445,1449)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1602
                     /gene="PBRM1"
                     /coded_by="XM_041460397.1:86..4894"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlkldsmgs krrratspss svsggdfdda hhstnvpgps rkrrrlsnlp
       61 tvdpiavche lyntirdykd eqgrllcelf irapkrrnqp dyyevvsqpi dlmkiqqklk
      121 meeyddvnvl tadfqllfnn akayykpdsp eykaacklwe lylrtknefv qkgdaeeddd
      181 deeghdnqan selsspgylk eileqlleav avatnpsgrl iselfqklps kvqypdyyai
      241 ikepidlkti sqriqngtyk sihamakdid llaknaktyn epgsqvfkda naikkifnmk
      301 kaeiehsela ksslrirtas nlaaskltgp ssqgkgsvgd ernssnkyyr nkrsaqgdrl
      361 saitmalqyg sesdedaala aaaryeeges eaesitsfmd tsnplyqlyd tvrscrnnqg
      421 qlisepffhl pskkkypdyy qqiktpislq qirtklknhe yetldqlead lnlmfenakr
      481 ynvpnsaiyk rvlkmqqvmq akkkelarrd diedgdsmis satsdtgssk rkskknirkq
      541 rmkilynavl earepgtgrr lcdlfmvkps kkdypdyyki ilepmdlkmi ehnirndkya
      601 aeeamiedmk lmfrnarhyn eegsqvynda hmlekilkek rkelgplaed ddvaspklkl
      661 srksgispkk skymtpmqqk lnevyeavkn ytdkrgrrls aiflrlpsrs elpdyyvtik
      721 kpvdmekirs hmmankyqdi dsmvedfvmm fnnactynep esliykdalv lhkvlletrr
      781 eiegdedshv pnvtlliqel ihnlfvsvms hqddegrcys dslaeipavd pnfpnkpplt
      841 fdiirknven nryrrldlfq enmfevlera rrmnrtdsei yedavelqqf fikirdelck
      901 ngeillspal syttkhlhnd vekekkeklp keieedklkr eeekreaeks edssgsagls
      961 nlhrtysqdc sfknsmyhvg dyvyvepaea slqphivcie rlwedsagek wlygcwfyrp
     1021 netfhlatrk flekevfksd yyskvpvski lgkcvvmfvk eyfklcpenf rdedvyvces
     1081 rysaktksfk kiklwtmpvs svrfvprdvp lpvvrvasvf antdkvdeek hsetledskv
     1141 gesilhlekd kedvpvemsn gepgchyfeq lcyndmwlkv gdcvfikshg lvrprvgrie
     1201 kmwvrdgaay ffgpifihpe eteheptkmf ykkevflsnl eetcpmtcil gkcvvlsfkd
     1261 flscrpteis endvflcesr ynesdkqmkk fkglkrfsls akvvddeiyy frkpivpqke
     1321 pspllekkiq qleakfaele ggdedmedmg eeegdmtetp smpqlqapla sdldimpytp
     1381 pqstpksvkg stkkegskrk inmsgyilfs semravikaq hpdysfgels rlvgtewrnl
     1441 eatkkaeyeg vigqnvspmv gtpapgaspf gqqigilgpp gqqapppypg qspasqpvmq
     1501 qpstpmfvsp ppktqrllhs eaylkyiegl saesnsiskw dqtlaarrrd vhlskeqesr
     1561 lpshwlkskg ahttmadalw rlrdlmlrdt lnirqaynle nv
//
LOCUS       XP_041316337            1708 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041316337
VERSION     XP_041316337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460403.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1708
                     /product="protein polybromo-1 isoform X10"
                     /calculated_mol_wt=194892
     Region          63..175
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(95,100,103,142,146,152)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          200..302
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(230,235,238,277,281,287)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          402..504
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(432,437,440,479,483,489)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          539..642
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(570,575,578,617,621,627)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          678..782
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(708,713,716,755,759,765)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          795..902
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(828,829,832,871,875,881)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          977..1094
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1176..1294
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1401..1460
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1401..1402,1404..1408,1411..1412,1419,1431..1432,
                     1435,1438..1439,1446,1450,1453,1457,1460)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     Region          <1435..>1625
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1708
                     /gene="PBRM1"
                     /coded_by="XM_041460403.1:86..5212"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlkkldsmg skrrratsps ssvsggdfdd ahhstnvpgp srkrrrlsnl
       61 ptvdpiavch elyntirdyk deqgrllcel firapkrrnq pdyyevvsqp idlmkiqqkl
      121 kmeeyddvnv ltadfqllfn nakayykpds peykaacklw elylrtknef vqkgdaeedd
      181 ddeeghdnqa nselsspgyl keileqllea vavatnpsgr liselfqklp skvqypdyya
      241 iikepidlkt isqriqngty ksihamakdi dllaknakty nepgsqvfkd anaikkifnm
      301 kkaeiehsel aksslrirta snlaaskltg pssqgkgsvg dernssnkyy rnkrsaqgdr
      361 lsaitmalqy gsesdedaal aaaaryeege seaesitsfm dtsnplyqly dtvrscrnnq
      421 gqlisepffh lpskkkypdy yqqiktpisl qqirtklknh eyetldqlea dlnlmfenak
      481 rynvpnsaiy krvlkmqqvm qakkkelarr ddiedgdsmi ssatsdtgss krkskknirk
      541 qrmkilynav learepgtgr rlcdlfmvkp skkdypdyyk iilepmdlkm iehnirndky
      601 aaeeamiedm klmfrnarhy neegsqvynd ahmlekilke krkelgplae dddvaspklk
      661 lsrksgispk kskymtpmqq klnevyeavk nytdkrgrrl saiflrlpsr selpdyyvti
      721 kkpvdmekir shmmankyqd idsmvedfvm mfnnactyne pesliykdal vlhkvlletr
      781 reiegdedsh vpnvtlliqe lihnlfvsvm shqddegrcy sdslaeipav dpnfpnkppl
      841 tfdiirknve nnryrrldlf qenmfevler arrmnrtdse iyedavelqq ffikirdelc
      901 kngeillspa lsyttkhlhn dvekekkekl pkeieedklk reeekreaek sedssgsagl
      961 snlhrtysqd csfknsmyhv gdyvyvepae aslqphivci erlwedsage kwlygcwfyr
     1021 pnetfhlatr kflekevfks dyyskvpvsk ilgkcvvmfv keyfklcpen frdedvyvce
     1081 srysaktksf kkiklwtmpv ssvrfvprdv plpvvrvasv fantdkvdee khsetledsk
     1141 vgesilhlek dkedvpvems ngepgchyfe qlcyndmwlk vgdcvfiksh glvrprvgri
     1201 ekmwvrdgaa yffgpifihp eeteheptkm fykkevflsn leetcpmtci lgkcvvlsfk
     1261 dflscrptei sendvflces rynesdkqmk kfkglkrfsl sakvvddeiy yfrkpivpqk
     1321 epspllekki qqleakfael eggdedmedm geeegdmtet psmpqlqapl asdldimpyt
     1381 ppqstpksvk gstkkegskr kinmsgyilf ssemravika qhpdysfgel srlvgtewrn
     1441 leatkkaeye eraakvaeqq ereraaqqqn sspragtpvg almgvvpppt pmgmlnqqlt
     1501 pvagmisgyp pvlpplqgpv dgivsmgsmq plhpgvppph qlppgmpgip gipppgvigq
     1561 nvspmvgtpa pgaspfgqqi gilgppgqqa pppypgqspa sqpvmqqpst pmfvspppkt
     1621 qrllhseayl kyieglsaes nsiskwdqtl aarrrdvhls keqesrlpsh wlkskgahtt
     1681 madalwrlrd lmlrdtlnir qaynlenv
//
LOCUS       XP_041316346            1659 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041316346
VERSION     XP_041316346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1659
                     /product="protein polybromo-1 isoform X11"
                     /calculated_mol_wt=190029
     Region          66..178
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(98,103,106,145,149,155)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          203..305
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(233,238,241,280,284,290)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          405..507
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(435,440,443,482,486,492)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          542..645
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(573,578,581,620,624,630)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          681..785
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(711,716,719,758,762,768)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          798..905
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(831,832,835,874,878,884)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          980..1097
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1179..1297
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1404..1463
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1404..1405,1407..1411,1414..1415,1422,1434..1435,
                     1438,1441..1442,1449,1453,1456,1460,1463)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1659
                     /gene="PBRM1"
                     /coded_by="XM_041460412.1:86..5065"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlvnlkkld smgskrrrat spsssvsggd fddahhstnv pgpsrkrrrl
       61 snlptvdpia vchelyntir dykdeqgrll celfirapkr rnqpdyyevv sqpidlmkiq
      121 qklkmeeydd vnvltadfql lfnnakayyk pdspeykaac klwelylrtk nefvqkgdae
      181 eddddeeghd nqanselssp gylkeileql leavavatnp sgrliselfq klpskvqypd
      241 yyaiikepid lktisqriqn gtyksihama kdidllakna ktynepgsqv fkdanaikki
      301 fnmkkaeieh selaksslri rtasnlaask ltgpssqgkg svgdernssn kyyrnkrsaq
      361 gdrlsaitma lqygsesded aalaaaarye egeseaesit sfmdtsnply qlydtvrscr
      421 nnqgqlisep ffhlpskkky pdyyqqiktp islqqirtkl knheyetldq leadlnlmfe
      481 nakrynvpns aiykrvlkmq qvmqakkkel arrddiedgd smissatsdt gsskrkskkn
      541 irkqrmkily navlearepg tgrrlcdlfm vkpskkdypd yykiilepmd lkmiehnirn
      601 dkyaaeeami edmklmfrna rhyneegsqv yndahmleki lkekrkelgp laedddvasp
      661 klklsrksgi spkkskymtp mqqklnevye avknytdkrg rrlsaiflrl psrselpdyy
      721 vtikkpvdme kirshmmank yqdidsmved fvmmfnnact ynepesliyk dalvlhkvll
      781 etrreiegde dshvpnvtll iqelihnlfv svmshqddeg rcysdslaei pavdpnfpnk
      841 ppltfdiirk nvennryrrl dlfqenmfev lerarrmnrt dseiyedave lqqffikird
      901 elckngeill spalsyttkh lhndvekekk eklpkeieed klkreeekre aeksedssgs
      961 aglsnlhrty sqdcsfknsm yhvgdyvyve paeaslqphi vcierlweds agekwlygcw
     1021 fyrpnetfhl atrkflekev fksdyyskvp vskilgkcvv mfvkeyfklc penfrdedvy
     1081 vcesrysakt ksfkkiklwt mpvssvrfvp rdvplpvvrv asvfantdkv deekhsetle
     1141 dskvgesilh lekdkedvpv emsngepgch yfeqlcyndm wlkvgdcvfi kshglvrprv
     1201 griekmwvrd gaayffgpif ihpeetehep tkmfykkevf lsnleetcpm tcilgkcvvl
     1261 sfkdflscrp teisendvfl cesrynesdk qmkkfkglkr fslsakvvdd eiyyfrkpiv
     1321 pqkepsplle kkiqqleakf aeleggdedm edmgeeegdm tetpsmpqlq aplasdldim
     1381 pytppqstpk svkgstkkeg skrkinmsgy ilfssemrav ikaqhpdysf gelsrlvgte
     1441 wrnleatkka eyeeraakva eqqereraaq qqnsspragt pvgalmgvvp pptpmgmlnq
     1501 qltpvagvig qnvspmvgtp apgaspfgqq igilgppgqq apppypgqsp asqpvmqqps
     1561 tpmfvspppk tqrllhseay lkyieglsae snsiskwdqt laarrrdvhl skeqesrlps
     1621 hwlkskgaht tmadalwrlr dlmlrdtlni rqaynlenv
//
LOCUS       XP_041316355            1570 aa            linear   VRT 06-MAY-2021
DEFINITION  protein polybromo-1 isoform X12 [Pyrgilauda ruficollis].
ACCESSION   XP_041316355
VERSION     XP_041316355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460421.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1570
                     /product="protein polybromo-1 isoform X12"
                     /calculated_mol_wt=180643
     Region          63..175
                     /region_name="Bromo_polybromo_I"
                     /note="Bromodomain, polybromo repeat I. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05524"
                     /db_xref="CDD:99954"
     Site            order(95,100,103,142,146,152)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99954"
     Region          200..302
                     /region_name="Bromo_polybromo_II"
                     /note="Bromodomain, polybromo repeat II. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05517"
                     /db_xref="CDD:99948"
     Site            order(230,235,238,277,281,287)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99948"
     Region          369..471
                     /region_name="Bromo_polybromo_III"
                     /note="Bromodomain, polybromo repeat III. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05520"
                     /db_xref="CDD:99951"
     Site            order(399,404,407,446,450,456)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99951"
     Region          506..609
                     /region_name="Bromo_polybromo_IV"
                     /note="Bromodomain, polybromo repeat IV. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05518"
                     /db_xref="CDD:99949"
     Site            order(537,542,545,584,588,594)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99949"
     Region          645..749
                     /region_name="Bromo_polybromo_V"
                     /note="Bromodomain, polybromo repeat V. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05515"
                     /db_xref="CDD:99946"
     Site            order(675,680,683,722,726,732)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99946"
     Region          762..869
                     /region_name="Bromo_polybromo_VI"
                     /note="Bromodomain, polybromo repeat VI. Polybromo is a
                     nuclear protein of unknown function, which contains 6
                     bromodomains. The human ortholog BAF180 is part of a
                     SWI/SNF chromatin-remodeling complex, and it may carry out
                     the functions of Yeast Rsc-1 and Rsc-2; cd05526"
                     /db_xref="CDD:99956"
     Site            order(795,796,799,838,842,848)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99956"
     Region          944..1061
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1143..1261
                     /region_name="BAH_polybromo"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in polybromo and yeast RSC1/2. The human polybromo protein
                     (BAF180) is a component of the SWI/SNF
                     chromatin-remodeling complex PBAF. It is thought that
                     polybromo participates in transcriptional...; cd04717"
                     /db_xref="CDD:240068"
     Region          1368..1418
                     /region_name="HMG-box_PB1"
                     /note="high mobility group (HMG)-box found in protein
                     polybromo-1 (PB1) and similar proteins; cd21984"
                     /db_xref="CDD:438800"
     Site            order(1368..1369,1371..1375,1378..1379,1386,1398..1399,
                     1402,1405..1406,1413,1417)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438800"
     CDS             1..1570
                     /gene="PBRM1"
                     /coded_by="XM_041460421.1:86..4798"
                     /db_xref="GeneID:121349662"
ORIGIN      
        1 mrrlafrgag stlkkldsmg skrrratsps ssvsggdfdd ahhstnvpgp srkrrrlsnl
       61 ptvdpiavch elyntirdyk deqgrllcel firapkrrnq pdyyevvsqp idlmkiqqkl
      121 kmeeyddvnv ltadfqllfn nakayykpds peykaacklw elylrtknef vqkgdaeedd
      181 ddeeghdnqa nselsspgyl keileqllea vavatnpsgr liselfqklp skvqypdyya
      241 iikepidlkt isqriqngty ksihamakdi dllaknakty nepgsqvfkd anaikkifnm
      301 kkaeiehsel aksslrisnk rsaqgdrlsa itmalqygse sdedaalaaa aryeegesea
      361 esitsfmdts nplyqlydtv rscrnnqgql isepffhlps kkkypdyyqq iktpislqqi
      421 rtklknheye tldqleadln lmfenakryn vpnsaiykrv lkmqqvmqak kkelarrddi
      481 edgdsmissa tsdtgsskrk skknirkqrm kilynavlea repgtgrrlc dlfmvkpskk
      541 dypdyykiil epmdlkmieh nirndkyaae eamiedmklm frnarhynee gsqvyndahm
      601 lekilkekrk elgplaeddd vaspklklsr ksgispkksk ymtpmqqkln evyeavknyt
      661 dkrgrrlsai flrlpsrsel pdyyvtikkp vdmekirshm mankyqdids mvedfvmmfn
      721 nactynepes liykdalvlh kvlletrrei egdedshvpn vtlliqelih nlfvsvmshq
      781 ddegrcysds laeipavdpn fpnkppltfd iirknvennr yrrldlfqen mfevlerarr
      841 mnrtdseiye davelqqffi kirdelckng eillspalsy ttkhlhndve kekkeklpke
      901 ieedklkree ekreaeksed ssgsaglsnl hrtysqdcsf knsmyhvgdy vyvepaeasl
      961 qphivcierl wedsagekwl ygcwfyrpne tfhlatrkfl ekevfksdyy skvpvskilg
     1021 kcvvmfvkey fklcpenfrd edvyvcesry saktksfkki klwtmpvssv rfvprdvplp
     1081 vvrvasvfan tdkvdeekhs etledskvge silhlekdke dvpvemsnge pgchyfeqlc
     1141 yndmwlkvgd cvfikshglv rprvgriekm wvrdgaayff gpifihpeet eheptkmfyk
     1201 kevflsnlee tcpmtcilgk cvvlsfkdfl scrpteisen dvflcesryn esdkqmkkfk
     1261 glkrfslsak vvddeiyyfr kpivpqkeps pllekkiqql eakfaelegg dedmedmgee
     1321 egdmtetpsm pqlqaplasd ldimpytppq stpksvkgst kkegskrkin msgyilfsse
     1381 mravikaqhp dysfgelsrl vgtewrnlea tkkaeyegvi gqnvspmvgt papgaspfgq
     1441 qigilgppgq qapppypgqs pasqpvmqqp stpmfvsppp ktqrllhsea ylkyieglsa
     1501 esnsiskwdq tlaarrrdvh lskeqesrlp shwlkskgah ttmadalwrl rdlmlrdtln
     1561 irqaynlenv
//
LOCUS       XP_041316367             446 aa            linear   VRT 06-MAY-2021
DEFINITION  protein cereblon isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041316367
VERSION     XP_041316367.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460433.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="protein cereblon isoform X1"
                     /calculated_mol_wt=51000
     Region          82..320
                     /region_name="LON_substr_bdg"
                     /note="ATP-dependent protease La (LON) substrate-binding
                     domain; pfam02190"
                     /db_xref="CDD:426647"
     Region          324..425
                     /region_name="CRBN_C_like"
                     /note="Thalidomide-binding C-terminal domain of cereblon
                     (CRBN) and similar protein domains; cd15777"
                     /db_xref="CDD:276940"
     CDS             1..446
                     /gene="CRBN"
                     /coded_by="XM_041460433.1:197..1537"
                     /db_xref="GeneID:121349721"
ORIGIN      
        1 maaedrggep rdnmgnhlql vpveseeedd nemevedqds keaekpniin fdtslptsht
       61 ylgsdmeefh grtvhdddsc qvipvlprvm vmlipgqtlp lqlfrpqevs mvrnliqkdr
      121 tfavlaysna hereahfgtt aeiyayreeq eygvetvkvk aigrqrfkvl eirtqsdgiq
      181 qakvqilper vlpptmsavq lqslsrshvl psskptswqd rairqwwqky qkrkfhcasl
      241 tswppwlysl ydaetlmerv krqlhewden lkdeslpsnp vdfsyrvaac lpiddalriq
      301 llkigsavqr lrceldimnk ctslcckqcq dteittknei fslslcgpma ayvnphgyih
      361 etltvykatn lslsgrpste hswfpgyawt iaqcricgsh mgwkftatrk elspprfwgl
      421 trsallprmp edaedsergr spllcl
//
LOCUS       XP_041316375             445 aa            linear   VRT 06-MAY-2021
DEFINITION  protein cereblon isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041316375
VERSION     XP_041316375.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460441.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="protein cereblon isoform X2"
                     /calculated_mol_wt=50901
     Region          81..319
                     /region_name="LON_substr_bdg"
                     /note="ATP-dependent protease La (LON) substrate-binding
                     domain; pfam02190"
                     /db_xref="CDD:426647"
     Region          323..424
                     /region_name="CRBN_C_like"
                     /note="Thalidomide-binding C-terminal domain of cereblon
                     (CRBN) and similar protein domains; cd15777"
                     /db_xref="CDD:276940"
     CDS             1..445
                     /gene="CRBN"
                     /coded_by="XM_041460441.1:199..1536"
                     /db_xref="GeneID:121349721"
ORIGIN      
        1 maaedrggep rdnmgnhlql vpeseeeddn emevedqdsk eaekpniinf dtslptshty
       61 lgsdmeefhg rtvhdddscq vipvlprvmv mlipgqtlpl qlfrpqevsm vrnliqkdrt
      121 favlaysnah ereahfgtta eiyayreeqe ygvetvkvka igrqrfkvle irtqsdgiqq
      181 akvqilperv lpptmsavql qslsrshvlp sskptswqdr airqwwqkyq krkfhcaslt
      241 swppwlysly daetlmervk rqlhewdenl kdeslpsnpv dfsyrvaacl piddalriql
      301 lkigsavqrl rceldimnkc tslcckqcqd teittkneif slslcgpmaa yvnphgyihe
      361 tltvykatnl slsgrpsteh swfpgyawti aqcricgshm gwkftatrke lspprfwglt
      421 rsallprmpe daedsergrs pllcl
//
LOCUS       XP_041316382             396 aa            linear   VRT 06-MAY-2021
DEFINITION  protein cereblon isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041316382
VERSION     XP_041316382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460448.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..396
                     /product="protein cereblon isoform X3"
                     /calculated_mol_wt=45206
     Region          82..270
                     /region_name="LON_substr_bdg"
                     /note="ATP-dependent protease La (LON) substrate-binding
                     domain; pfam02190"
                     /db_xref="CDD:426647"
     Region          274..375
                     /region_name="CRBN_C_like"
                     /note="Thalidomide-binding C-terminal domain of cereblon
                     (CRBN) and similar protein domains; cd15777"
                     /db_xref="CDD:276940"
     CDS             1..396
                     /gene="CRBN"
                     /coded_by="XM_041460448.1:201..1391"
                     /db_xref="GeneID:121349721"
ORIGIN      
        1 maaedrggep rdnmgnhlql vpveseeedd nemevedqds keaekpniin fdtslptsht
       61 ylgsdmeefh grtvhdddsc qvipvlprvm vmlipgqtlp lqlfrpqevs mvrnliqkdr
      121 tfavlaysiq qakvqilper vlpptmsavq lqslsrshvl psskptswqd rairqwwqky
      181 qkrkfhcasl tswppwlysl ydaetlmerv krqlhewden lkdeslpsnp vdfsyrvaac
      241 lpiddalriq llkigsavqr lrceldimnk ctslcckqcq dteittknei fslslcgpma
      301 ayvnphgyih etltvykatn lslsgrpste hswfpgyawt iaqcricgsh mgwkftatrk
      361 elspprfwgl trsallprmp edaedsergr spllcl
//
LOCUS       XP_041316393             432 aa            linear   VRT 06-MAY-2021
DEFINITION  CCA tRNA nucleotidyltransferase 1, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316393
VERSION     XP_041316393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="CCA tRNA nucleotidyltransferase 1,
                     mitochondrial"
                     /calculated_mol_wt=49258
     Region          42..426
                     /region_name="PcnB"
                     /note="tRNA nucleotidyltransferase/poly(A) polymerase
                     [Translation, ribosomal structure and biogenesis];
                     COG0617"
                     /db_xref="CDD:440382"
     CDS             1..432
                     /gene="TRNT1"
                     /coded_by="XM_041460459.1:115..1413"
                     /db_xref="GeneID:121349740"
ORIGIN      
        1 mwaelwlvpr raglrllrrr hggsgtgamr lqapqfqalf tpglrsvael fekknyelri
       61 aggavrdlls gvtpqdidfa ttatpaemke mftaagvrli nnkgekhgti tarlheqnfe
      121 ittlridvvt dgrhaeveft tdwhkdaerr dltvnsmflg ldgtlydffn gyedlknkki
      181 rfvgkaaeri qedylrilry frfygriaek pgdhepitlq aikenakgla gisgeriwve
      241 lkkillgnhv nhlvqlmyel ditqyiglpl dgnleefarv skniqnlspk pmtvltslfk
      301 gkddvtnldl rlkiskeekn lglflvkhrq eltkgsgpep lrpyqdflmd sreantnski
      361 fellkyqgee qllkemqewt vpsfpvsghd lrkmgvssgk eigtalqqlr dewkksgyhm
      421 dkeellsclk kl
//
LOCUS       XP_041316405             800 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase Nek4 [Pyrgilauda ruficollis].
ACCESSION   XP_041316405
VERSION     XP_041316405.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460471.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..800
                     /product="serine/threonine-protein kinase Nek4"
                     /calculated_mol_wt=90163
     Region          5..261
                     /region_name="STKc_Nek4"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Never In Mitosis gene A (NIMA)-related kinase 4; cd08223"
                     /db_xref="CDD:270862"
     Site            order(12..16,20,33,35,66,83..86,90,92,131,133,135..136,
                     138,149,152,154,168..171)
                     /site_type="active"
                     /db_xref="CDD:270862"
     Site            order(12..13,15..16,20,33,35,66,84..86,90,136,138,154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270862"
     Site            order(16,90,92,131,133,135,152,168..171)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270862"
     Site            148..171
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270862"
     CDS             1..800
                     /gene="NEK4"
                     /coded_by="XM_041460471.1:129..2531"
                     /db_xref="GeneID:121349746"
ORIGIN      
        1 mplaaycflr avgkgsygev slarhrqdrk qyvikklnlr sassrerraa eqeaqllsql
       61 rhpnivtyre swqgddghly ivmgfceggd lyhklkeqkg kllpenqvve wfvqiamalq
      121 ylhekhilhr dlktqniflt rtniikvgdl giarvlenqy dmastligtp yymspelfsn
      181 kpynyksdvw algccvyema tlkhafnakd mnslayriie gklppmpkdy spqlveiiqt
      241 mlskkpeerp svksilrqpy ikqqislfle atkakaarnn kktedskpke yrsvisakne
      301 shsrsvthqn hsseqarkyk vdeedciskc kasrfypsek pavelerkps kndlnslgds
      361 iatvsgvnid vslsermkhg sdkcgsesip ennkakhlhv pghskitsnn paikedgqqq
      421 rakqafkaes veskpssvds veeeddtlkl lqpvskdqkq tdlsldstek llapfvpvvi
      481 qddishgasg aaqgkmtfhk qphscvseps lpqqqqqkre laegcsekfr avsprplpvp
      541 sdvtpktiqr gaehpepads akpsqaaipk erplsarerr rlkqsremlp svvparqsln
      601 gaaveakshv encvnvpqss sdpsisqrkr eahclsddel ssstssteks dgdskekkss
      661 vnemndlvql mtwtlkmdsk enseccvtst papefklhrk yrdtlilhgk spdeseelkl
      721 egipsdmslv pykirrmvei lrsdvvqglg vkllekvyri meeddeakre lqlrehmgdk
      781 yvsysakarh lkfleenvkl
//
LOCUS       XP_041316420             372 aa            linear   VRT 06-MAY-2021
DEFINITION  glycosyltransferase 8 domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316420
VERSION     XP_041316420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="glycosyltransferase 8 domain-containing protein
                     1"
                     /calculated_mol_wt=42307
     Region          67..352
                     /region_name="GT8_like_1"
                     /note="GT8_like_1 represents a subfamily of GT8 with
                     unknown function; cd06429"
                     /db_xref="CDD:133051"
     Site            order(72,74..77,155,170,172..174,199,243..245,286..287,
                     308..309,329,331..332,335)
                     /site_type="active"
                     /note="putative ligand binding site [active]"
                     /db_xref="CDD:133051"
     Site            order(172,174,329)
                     /site_type="active"
                     /note="metal binding site [active]"
                     /db_xref="CDD:133051"
     CDS             1..372
                     /gene="GLT8D1"
                     /coded_by="XM_041460486.1:178..1296"
                     /db_xref="GeneID:121349751"
ORIGIN      
        1 mtlrkvnisi livaviifll vihhnflsls dflrrelsdp splglqpidf ipaapqrlad
       61 erndkeipvv iaasderlgg aiaamnsiyq ntrsnvvfyi vtlndtvdhl rtwlrspplk
      121 nmryrildfd prvlegkvqv dpqkadnfkp ltfarfylps fvphaekviy vdddvivqdd
      181 ivelyntplk pghaaafsdd cdstsskvvv rgagnqynyi gfldykketi rklamkantc
      241 sfnpgvfian ltewklqnit kqlekwmaln vveelysktl agsittppll ivfykqhssi
      301 dpmwnvrhlg ssagkryspq fveaakllhw nghfkpwgrt asyaevwekw yvpdpagkfn
      361 lirrhseaye ak
//
LOCUS       XP_041316429             372 aa            linear   VRT 06-MAY-2021
DEFINITION  glycosyltransferase 8 domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316429
VERSION     XP_041316429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460495.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="glycosyltransferase 8 domain-containing protein
                     1"
                     /calculated_mol_wt=42307
     Region          67..352
                     /region_name="GT8_like_1"
                     /note="GT8_like_1 represents a subfamily of GT8 with
                     unknown function; cd06429"
                     /db_xref="CDD:133051"
     Site            order(72,74..77,155,170,172..174,199,243..245,286..287,
                     308..309,329,331..332,335)
                     /site_type="active"
                     /note="putative ligand binding site [active]"
                     /db_xref="CDD:133051"
     Site            order(172,174,329)
                     /site_type="active"
                     /note="metal binding site [active]"
                     /db_xref="CDD:133051"
     CDS             1..372
                     /gene="GLT8D1"
                     /coded_by="XM_041460495.1:178..1296"
                     /db_xref="GeneID:121349751"
ORIGIN      
        1 mtlrkvnisi livaviifll vihhnflsls dflrrelsdp splglqpidf ipaapqrlad
       61 erndkeipvv iaasderlgg aiaamnsiyq ntrsnvvfyi vtlndtvdhl rtwlrspplk
      121 nmryrildfd prvlegkvqv dpqkadnfkp ltfarfylps fvphaekviy vdddvivqdd
      181 ivelyntplk pghaaafsdd cdstsskvvv rgagnqynyi gfldykketi rklamkantc
      241 sfnpgvfian ltewklqnit kqlekwmaln vveelysktl agsittppll ivfykqhssi
      301 dpmwnvrhlg ssagkryspq fveaakllhw nghfkpwgrt asyaevwekw yvpdpagkfn
      361 lirrhseaye ak
//
LOCUS       XP_041316441             211 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptidase complex subunit 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316441
VERSION     XP_041316441.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460507.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..211
                     /product="signal peptidase complex subunit 1 isoform X1"
                     /calculated_mol_wt=22267
     Region          123..192
                     /region_name="SPC12"
                     /note="Microsomal signal peptidase 12 kDa subunit (SPC12);
                     pfam06645"
                     /db_xref="CDD:461973"
     CDS             1..211
                     /gene="SPCS1"
                     /coded_by="XM_041460507.1:60..695"
                     /db_xref="GeneID:121349764"
ORIGIN      
        1 mrpderggag aeqprsgggg aeamaeaggg tpgrrssgrg grgvfpassa aafrsaatsa
       61 gssgeaavrp ansrappgsv etaakrngkk pekrrrhaer vplhphadgd vvkpaeevfs
      121 atdykgqkla eqifqgiilv savigfiygy iteqfgwtvy ivmagfalsc lltlppwpmy
      181 rrnplkwlpv qesgteekka adrkpkrhsk s
//
LOCUS       XP_041316449             101 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptidase complex subunit 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316449
VERSION     XP_041316449.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460515.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="signal peptidase complex subunit 1 isoform X2"
                     /calculated_mol_wt=11467
     Region          12..82
                     /region_name="SPC12"
                     /note="Microsomal signal peptidase 12 kDa subunit (SPC12);
                     pfam06645"
                     /db_xref="CDD:461973"
     CDS             1..101
                     /gene="SPCS1"
                     /coded_by="XM_041460515.1:231..536"
                     /db_xref="GeneID:121349764"
ORIGIN      
        1 mlsvfrsipt qmdykgqkla eqifqgiilv savigfiygy iteqfgwtvy ivmagfalsc
       61 lltlppwpmy rrnplkwlpv qesgteekka adrkpkrhsk s
//
LOCUS       XP_041316460             477 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316460
VERSION     XP_041316460.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460526.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="ankyrin repeat and BTB/POZ domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=54595
     Site            order(1,3,7..8,11..13,15..16,20,23,33,35,37,41..42,45..47,
                     49..50,54,57,66,68,70,74..75,77,79,83,86)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1..33
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <6..>86
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          35..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          96..214
                     /region_name="BTB1_POZ_ABTB1_BPOZ1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Ankyrin repeat and BTB/POZ domain-containing protein 1
                     (ABTB1); cd18295"
                     /db_xref="CDD:349604"
     Region          253..376
                     /region_name="BTB2_POZ_ABTB1_BPOZ1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Ankyrin repeat and BTB/POZ domain-containing protein 1
                     (ABTB1); cd18296"
                     /db_xref="CDD:349605"
     Region          375..446
                     /region_name="BACK_ABTB1_BPOZ"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     ankyrin repeat and BTB/POZ domain-containing protein 1
                     (ABTB1); cd18497"
                     /db_xref="CDD:350572"
     CDS             1..477
                     /gene="ABTB1"
                     /coded_by="XM_041460526.1:125..1558"
                     /db_xref="GeneID:121349780"
ORIGIN      
        1 mdtsdlftsc kkgdvsrvry lleqrdvein vrdkwdstpl yyaclcghee lvryllanga
       61 kceantfdge rclygalsda irrllkeykq itakcmkrdy ydvflqrlle qgyqsdivfi
      121 vhgksfcahr cilsarsayf aemfetkwkg knmivlkhpl inpaafgall qylytgrldi
      181 dveyvsdckr lakqcrlqdl iddletkckk vyefvsskpg tcvkvltiep tgncrlqedl
      241 alladcalpa elrvgfgelp fdstdnfnsc pdvcfrvedy nflchkaffc grsdyfkall
      301 edhfseseel qtqpsipvvt lhnisedifi rvlyyiysdd telspenayd vlcvadmyll
      361 pglkrlcgrt laqildedni isiwriaklf qltrledqct eymakiiekl veleefaaav
      421 kenaeaveer qetdsiplvd dirfhitsnv qtysaieean qklealenll asiglec
//
LOCUS       XP_041316469             464 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and BTB/POZ domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316469
VERSION     XP_041316469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="ankyrin repeat and BTB/POZ domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=52816
     Region          <28..89
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          83..201
                     /region_name="BTB1_POZ_ABTB1_BPOZ1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Ankyrin repeat and BTB/POZ domain-containing protein 1
                     (ABTB1); cd18295"
                     /db_xref="CDD:349604"
     Region          240..363
                     /region_name="BTB2_POZ_ABTB1_BPOZ1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Ankyrin repeat and BTB/POZ domain-containing protein 1
                     (ABTB1); cd18296"
                     /db_xref="CDD:349605"
     Region          362..433
                     /region_name="BACK_ABTB1_BPOZ"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     ankyrin repeat and BTB/POZ domain-containing protein 1
                     (ABTB1); cd18497"
                     /db_xref="CDD:350572"
     CDS             1..464
                     /gene="ABTB1"
                     /coded_by="XM_041460535.1:160..1554"
                     /db_xref="GeneID:121349780"
ORIGIN      
        1 mwklmsvisg tvhpceccsl enwlgggyya clcgheelvr yllangakce antfdgercl
       61 ygalsdairr llkeykqita kcmkrdyydv flqrlleqgy qsdivfivhg ksfcahrcil
      121 sarsayfaem fetkwkgknm ivlkhplinp aafgallqyl ytgrldidve yvsdckrlak
      181 qcrlqdlidd letkckkvye fvsskpgtcv kvltieptgn crlqedlall adcalpaelr
      241 vgfgelpfds tdnfnscpdv cfrvedynfl chkaffcgrs dyfkalledh fseseelqtq
      301 psipvvtlhn isedifirvl yyiysddtel spenaydvlc vadmyllpgl krlcgrtlaq
      361 ildedniisi wriaklfqlt rledqcteym akiieklvel eefaaavken aeaveerqet
      421 dsiplvddir fhitsnvqty saieeanqkl ealenllasi glec
//
LOCUS       XP_041316481            1898 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-A1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041316481
VERSION     XP_041316481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1898
                     /product="plexin-A1 isoform X1"
                     /calculated_mol_wt=213282
     Region          43..516
                     /region_name="Sema_plexin_A1"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin A1; cd11271"
                     /db_xref="CDD:200532"
     Site            order(99,101..102,161,198..200,226..228,235..237,391,394,
                     396,399..403,413..414,416)
                     /site_type="other"
                     /note="putative Semaphorin binding site [polypeptide
                     binding]"
                     /db_xref="CDD:200532"
     Region          517..559
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          572..662
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          663..710
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          716..810
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          812..864
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          866..962
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          963..1048
                     /region_name="IPT_plexin_repeat2"
                     /note="Second repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01179"
                     /db_xref="CDD:238584"
     Region          1050..1150
                     /region_name="IPT_plexin_repeat3"
                     /note="Third repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01181"
                     /db_xref="CDD:238586"
     Region          1152..1236
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1320..1863
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1898
                     /gene="PLXNA1"
                     /coded_by="XM_041460547.1:313..6009"
                     /db_xref="GeneID:121349792"
ORIGIN      
        1 malagceaaa mwllwlkhhl sihiwtllll gstwlplaeg spkspfrtfp vtdwslthlv
       61 vhnktgevyv gavnriykls nnltllrthv tgpvednekc ypppsvqscp hglvttnnvn
      121 klllvdysgn rliacgsasq gicqflrldd lfklgephhr kehylssvne sgtmsgviie
      181 vlngqnklfi gtpidgksey fptlssrklm aneenaemfg fvyqdefvss qlkipsdtls
      241 kfptfdiyyi ysfsseqfvy yltlqldtql tspdstgeqf ftskivrlcv ddpkfysyve
      301 fpigcvqdgi eyrliqdayl tkpgkalaky lgiseqedil ftifsqgqkn rvkppkesvl
      361 clftlkkikd kikeriqscy rgegklslpw llnkelgcin splqiddnfc gqdfnqplgg
      421 tvtiegtplf vdkedgmtsv aaydyrgqtv vfagtrsgri kkilvdlpae rkhqalqyen
      481 vvahegssil rdlvlspdrq hiyamtekqv trvpvesceq yescelclgs rdphcgwcvl
      541 hnicsrkdrc eradepqrfa selrqcvqlt vqpsnisvtm sevplvlqaw nvpdlsagvn
      601 csfedftese sriedgkiyc sspsakdvip itrgrgdkrv vklylksket gkkfasvdfv
      661 fyncsvhqsc lscvngsfpc hwckyrhict hnaadcsfle grvklsedcp qilpstqiyi
      721 pvgvvkpitl taknlpqpqs gqrnyecifh ipgsttrvta lrfnstsiqc qntsyfyegn
      781 disdlpvnls vvwngnfvid npqniqahly kcsalrescg lclkadprfe cgwcvserrc
      841 slrqhclaye nswmhassgn srctdpkitk lfpetgprqg gtrltitgen lglkfedvrw
      901 gvrvgkvmci pieseyisae qivceigdas lskvhearve vcirdctpsy raispktftf
      961 vtptfsrvvp argplsggtw iaiegthlna gsnvsvtigg rpcafswrsa reircrtppg
     1021 htpggspili ninraelsnp evkynytedp tiqkidpews insggtlltv tgtnlatike
     1081 prirakycss erennctvyn dttmvcyaps idnpvrsppe lgdrpdeigf vmdnvqalli
     1141 inttnfvyyp dpvfeplspt gmlelkpssp lilkgrnllp paagnsrlny tvligdtpct
     1201 ltvsetqllc espnltgqhk vtikaggfef spgtlqiysd slltlpaiig igggggllll
     1261 iiiivliayk rksrdadrtl krlqlqmdnl esrvalecke afaelqtdin eltndldgag
     1321 ipfldyrtya mrvlfpgied hpvlkemevq anveksltlf gqllnkkhfl ltfirtleaq
     1381 rsfsmrdrgn vaslimtalq gemeyatgvl kqllsdliek nlesknhpkl llrrtesvae
     1441 kmltnwftfl lykflkecag eplfmlycai kqqmekgpid aitgearysl sedklirqqi
     1501 dykmltlncv npenenapei pvkvlncdti tqvkekllda vykgvpysqr pkagdmdlew
     1561 rqgrmariil qdedvttkid ndwkrlntla hyqvtdgssv alvpkqnsay nisnsstftk
     1621 slsryesmlr tasspdslrs rapmitpdle sgtklwhlvk nhdhmdqreg drgskmvsei
     1681 yltrllatkg tlqkfvddlf etifstahrg salplaikym fdfldeqadk hqindydvrh
     1741 twksnclplr fwvnviknpq fvfdihknsi tdaclsvvaq tfmdscstse hklgkdspsn
     1801 kllyakdipn ykswveryya diakmpaisd qdmsaylaeq srlhlsqfns msalheiysy
     1861 itkykdeila alekdeqarr qrlrskleqa idtmalss
//
LOCUS       XP_041316489            1898 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-A1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041316489
VERSION     XP_041316489.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460555.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1898
                     /product="plexin-A1 isoform X1"
                     /calculated_mol_wt=213282
     Region          43..516
                     /region_name="Sema_plexin_A1"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin A1; cd11271"
                     /db_xref="CDD:200532"
     Site            order(99,101..102,161,198..200,226..228,235..237,391,394,
                     396,399..403,413..414,416)
                     /site_type="other"
                     /note="putative Semaphorin binding site [polypeptide
                     binding]"
                     /db_xref="CDD:200532"
     Region          517..559
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          572..662
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          663..710
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          716..810
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          812..864
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          866..962
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          963..1048
                     /region_name="IPT_plexin_repeat2"
                     /note="Second repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01179"
                     /db_xref="CDD:238584"
     Region          1050..1150
                     /region_name="IPT_plexin_repeat3"
                     /note="Third repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01181"
                     /db_xref="CDD:238586"
     Region          1152..1236
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1320..1863
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1898
                     /gene="PLXNA1"
                     /coded_by="XM_041460555.1:279..5975"
                     /db_xref="GeneID:121349792"
ORIGIN      
        1 malagceaaa mwllwlkhhl sihiwtllll gstwlplaeg spkspfrtfp vtdwslthlv
       61 vhnktgevyv gavnriykls nnltllrthv tgpvednekc ypppsvqscp hglvttnnvn
      121 klllvdysgn rliacgsasq gicqflrldd lfklgephhr kehylssvne sgtmsgviie
      181 vlngqnklfi gtpidgksey fptlssrklm aneenaemfg fvyqdefvss qlkipsdtls
      241 kfptfdiyyi ysfsseqfvy yltlqldtql tspdstgeqf ftskivrlcv ddpkfysyve
      301 fpigcvqdgi eyrliqdayl tkpgkalaky lgiseqedil ftifsqgqkn rvkppkesvl
      361 clftlkkikd kikeriqscy rgegklslpw llnkelgcin splqiddnfc gqdfnqplgg
      421 tvtiegtplf vdkedgmtsv aaydyrgqtv vfagtrsgri kkilvdlpae rkhqalqyen
      481 vvahegssil rdlvlspdrq hiyamtekqv trvpvesceq yescelclgs rdphcgwcvl
      541 hnicsrkdrc eradepqrfa selrqcvqlt vqpsnisvtm sevplvlqaw nvpdlsagvn
      601 csfedftese sriedgkiyc sspsakdvip itrgrgdkrv vklylksket gkkfasvdfv
      661 fyncsvhqsc lscvngsfpc hwckyrhict hnaadcsfle grvklsedcp qilpstqiyi
      721 pvgvvkpitl taknlpqpqs gqrnyecifh ipgsttrvta lrfnstsiqc qntsyfyegn
      781 disdlpvnls vvwngnfvid npqniqahly kcsalrescg lclkadprfe cgwcvserrc
      841 slrqhclaye nswmhassgn srctdpkitk lfpetgprqg gtrltitgen lglkfedvrw
      901 gvrvgkvmci pieseyisae qivceigdas lskvhearve vcirdctpsy raispktftf
      961 vtptfsrvvp argplsggtw iaiegthlna gsnvsvtigg rpcafswrsa reircrtppg
     1021 htpggspili ninraelsnp evkynytedp tiqkidpews insggtlltv tgtnlatike
     1081 prirakycss erennctvyn dttmvcyaps idnpvrsppe lgdrpdeigf vmdnvqalli
     1141 inttnfvyyp dpvfeplspt gmlelkpssp lilkgrnllp paagnsrlny tvligdtpct
     1201 ltvsetqllc espnltgqhk vtikaggfef spgtlqiysd slltlpaiig igggggllll
     1261 iiiivliayk rksrdadrtl krlqlqmdnl esrvalecke afaelqtdin eltndldgag
     1321 ipfldyrtya mrvlfpgied hpvlkemevq anveksltlf gqllnkkhfl ltfirtleaq
     1381 rsfsmrdrgn vaslimtalq gemeyatgvl kqllsdliek nlesknhpkl llrrtesvae
     1441 kmltnwftfl lykflkecag eplfmlycai kqqmekgpid aitgearysl sedklirqqi
     1501 dykmltlncv npenenapei pvkvlncdti tqvkekllda vykgvpysqr pkagdmdlew
     1561 rqgrmariil qdedvttkid ndwkrlntla hyqvtdgssv alvpkqnsay nisnsstftk
     1621 slsryesmlr tasspdslrs rapmitpdle sgtklwhlvk nhdhmdqreg drgskmvsei
     1681 yltrllatkg tlqkfvddlf etifstahrg salplaikym fdfldeqadk hqindydvrh
     1741 twksnclplr fwvnviknpq fvfdihknsi tdaclsvvaq tfmdscstse hklgkdspsn
     1801 kllyakdipn ykswveryya diakmpaisd qdmsaylaeq srlhlsqfns msalheiysy
     1861 itkykdeila alekdeqarr qrlrskleqa idtmalss
//
LOCUS       XP_041316497            1896 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-A1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041316497
VERSION     XP_041316497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1896
                     /product="plexin-A1 isoform X2"
                     /calculated_mol_wt=213055
     Region          43..516
                     /region_name="Sema_plexin_A1"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin A1; cd11271"
                     /db_xref="CDD:200532"
     Site            order(99,101..102,161,198..200,226..228,235..237,391,394,
                     396,399..403,413..414,416)
                     /site_type="other"
                     /note="putative Semaphorin binding site [polypeptide
                     binding]"
                     /db_xref="CDD:200532"
     Region          517..559
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          572..662
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          663..710
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          716..810
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          812..864
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          866..962
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          963..1048
                     /region_name="IPT_plexin_repeat2"
                     /note="Second repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01179"
                     /db_xref="CDD:238584"
     Region          1050..1150
                     /region_name="IPT_plexin_repeat3"
                     /note="Third repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01181"
                     /db_xref="CDD:238586"
     Region          1152..1236
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1320..1861
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1896
                     /gene="PLXNA1"
                     /coded_by="XM_041460563.1:314..6004"
                     /db_xref="GeneID:121349792"
ORIGIN      
        1 malagceaaa mwllwlkhhl sihiwtllll gstwlplaeg spkspfrtfp vtdwslthlv
       61 vhnktgevyv gavnriykls nnltllrthv tgpvednekc ypppsvqscp hglvttnnvn
      121 klllvdysgn rliacgsasq gicqflrldd lfklgephhr kehylssvne sgtmsgviie
      181 vlngqnklfi gtpidgksey fptlssrklm aneenaemfg fvyqdefvss qlkipsdtls
      241 kfptfdiyyi ysfsseqfvy yltlqldtql tspdstgeqf ftskivrlcv ddpkfysyve
      301 fpigcvqdgi eyrliqdayl tkpgkalaky lgiseqedil ftifsqgqkn rvkppkesvl
      361 clftlkkikd kikeriqscy rgegklslpw llnkelgcin splqiddnfc gqdfnqplgg
      421 tvtiegtplf vdkedgmtsv aaydyrgqtv vfagtrsgri kkilvdlpae rkhqalqyen
      481 vvahegssil rdlvlspdrq hiyamtekqv trvpvesceq yescelclgs rdphcgwcvl
      541 hnicsrkdrc eradepqrfa selrqcvqlt vqpsnisvtm sevplvlqaw nvpdlsagvn
      601 csfedftese sriedgkiyc sspsakdvip itrgrgdkrv vklylksket gkkfasvdfv
      661 fyncsvhqsc lscvngsfpc hwckyrhict hnaadcsfle grvklsedcp qilpstqiyi
      721 pvgvvkpitl taknlpqpqs gqrnyecifh ipgsttrvta lrfnstsiqc qntsyfyegn
      781 disdlpvnls vvwngnfvid npqniqahly kcsalrescg lclkadprfe cgwcvserrc
      841 slrqhclaye nswmhassgn srctdpkitk lfpetgprqg gtrltitgen lglkfedvrw
      901 gvrvgkvmci pieseyisae qivceigdas lskvhearve vcirdctpsy raispktftf
      961 vtptfsrvvp argplsggtw iaiegthlna gsnvsvtigg rpcafswrsa reircrtppg
     1021 htpggspili ninraelsnp evkynytedp tiqkidpews insggtlltv tgtnlatike
     1081 prirakycss erennctvyn dttmvcyaps idnpvrsppe lgdrpdeigf vmdnvqalli
     1141 inttnfvyyp dpvfeplspt gmlelkpssp lilkgrnllp paagnsrlny tvligdtpct
     1201 ltvsetqllc espnltgqhk vtikaggfef spgtlqiysd slltlpaiig igggggllll
     1261 iiiivliayk rksrdadrtl krlqlqmdnl esrvalecke afaelqtdin eltndldgag
     1321 ipfldyrtya mrvlfpgied hpvlkemean veksltlfgq llnkkhfllt firtleaqrs
     1381 fsmrdrgnva slimtalqge meyatgvlkq llsdlieknl esknhpklll rrtesvaekm
     1441 ltnwftflly kflkecagep lfmlycaikq qmekgpidai tgearyslse dklirqqidy
     1501 kmltlncvnp enenapeipv kvlncdtitq vkeklldavy kgvpysqrpk agdmdlewrq
     1561 grmariilqd edvttkidnd wkrlntlahy qvtdgssval vpkqnsayni snsstftksl
     1621 sryesmlrta sspdslrsra pmitpdlesg tklwhlvknh dhmdqregdr gskmvseiyl
     1681 trllatkgtl qkfvddlfet ifstahrgsa lplaikymfd fldeqadkhq indydvrhtw
     1741 ksnclplrfw vnviknpqfv fdihknsitd aclsvvaqtf mdscstsehk lgkdspsnkl
     1801 lyakdipnyk swveryyadi akmpaisdqd msaylaeqsr lhlsqfnsms alheiysyit
     1861 kykdeilaal ekdeqarrqr lrskleqaid tmalss
//
LOCUS       XP_041316511            1078 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeats and immunoglobulin-like domains protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316511
VERSION     XP_041316511.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460577.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1078
                     /product="leucine-rich repeats and immunoglobulin-like
                     domains protein 1"
                     /calculated_mol_wt=117739
     Region          54..76
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          75..134
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          100..123
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          123..>405
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          124..147
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..195
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          196..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          220..243
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          244..267
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          268..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          292..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..339
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          340..364
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          367..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          391..412
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          395..>473
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          477..564
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          583..673
                     /region_name="IgI_LRIG1-like"
                     /note="Immunoglobulin (Ig)-like ectodomain of the LRIG1
                     (Leucine-rich Repeats And Immunoglobulin-like Domains
                     Protein 1) and similar proteins; member of the I-set of
                     IgSF domains; cd05763"
                     /db_xref="CDD:409420"
     Region          583..586
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409420"
     Region          590..594
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409420"
     Region          597..606
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409420"
     Region          612..617
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409420"
     Region          620..622
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409420"
     Region          630..634
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409420"
     Region          638..645
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409420"
     Region          651..659
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409420"
     Region          662..673
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409420"
     Region          676..763
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          693..697
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          706..710
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          729..733
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          743..748
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          756..759
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..1078
                     /gene="LRIG1"
                     /coded_by="XM_041460577.1:333..3569"
                     /db_xref="GeneID:121349809"
ORIGIN      
        1 malpsraaaa llllgllrsa aagcpagcac ggdtlscggl alpalprdlp rwprhvnlsy
       61 nklaeidpsv faelsnlqev rldhnelsai pslgsaassv rslhlhhnri rsvegtqlqp
      121 yvaletldls fnditeirng cfpqglhike lylgsnrist lepgafdsls rslltlrlsk
      181 nritqlpvka frlprliqle lnrnrirlie gltfqgldsl evlklqrnni skltdgafwg
      241 lakmqvlhle ynsltevnsg slyglsslhq lhlsnnsisr inpdgwsfcq klhelilsyn
      301 nltrldegsl adlgglhvlr lshnsinhia egafrglknl rvleldhndi sgtiedtnga
      361 ftglenlskl tlfgnkiksv akkafsglea lehlnlgana irsiqadafa rmrslrqlhi
      421 nsdsflcdcq lkwlpqwlve kelqsfvvat cahpeslksk sifaiqpesf vcddfpkpqi
      481 iiqpettvav lgkdirftcl aassssspmv fawkkdneml hnaeienfah vrakdgevme
      541 cttilhlrhv tfahegryqc vitnhfgsty snkarltvnv lpsfiktphd itsrtgttar
      601 lecaaeghpp pqiawqkdgg tdfpaarerr mhvmpdddvf fitdvkvedm gvysctaqns
      661 agsvlanatl tvletpslvh pledhvvsvg etvalqckat gspppritwl kgdqplvvte
      721 rhhftsgnql livrnvvled agkytcemsn tlgterahsh vsilqslgcr kdrttvgiit
      781 iavvcsivlt slvwvciiyq trkkseeysv tntdetivpp dvpsylssqg tlserqevai
      841 gvdtqqpngh idsngmcqad tgrcpdveap avgcrqpklc isynkdtwkt edmadgmlvp
      901 dktgyglpvv ctecsgstds vtvrsypkdc qslktvesth pnalssrehq rkrsagtsll
      961 haqpcngias gkrmetdgtl ypsnhdrirp egtagallad ahgssqaakp selnnlnlvr
     1021 aspaggslkq lnvlpeispa lldlqreaev eqallasstt aqphdsthep klpnrsld
//
LOCUS       XP_041316522             267 aa            linear   VRT 06-MAY-2021
DEFINITION  S-adenosylmethionine mitochondrial carrier protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316522
VERSION     XP_041316522.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460588.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..267
                     /product="S-adenosylmethionine mitochondrial carrier
                     protein"
                     /calculated_mol_wt=28216
     Region          20..258
                     /region_name="PTZ00168"
                     /note="mitochondrial carrier protein; Provisional"
                     /db_xref="CDD:185494"
     CDS             1..267
                     /gene="SLC25A26"
                     /coded_by="XM_041460588.1:101..904"
                     /db_xref="GeneID:121349820"
ORIGIN      
        1 mepreswaal aaggvagvcv dlilfpldtv ktrlqspqgf rkaggfrgiy agvpstaigs
       61 fpnaaaffit yenvksvlph gsssylspat hmvaaslgev vaclirvpse vvkqraqvsp
      121 ssstlrilsh tlyhegiqgl yrgykstvlr eipfslvqfp lweslkdlws wkqghvvdsw
      181 qsavcgafag gfaaavttpl dvaktrimla kagssnasgn vlaalggiwr tqglsglfag
      241 vvprmaaisl ggfiflgtye ktrqlll
//
LOCUS       XP_041316535             846 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316535
VERSION     XP_041316535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..846
                     /product="sarcolemmal membrane-associated protein isoform
                     X1"
                     /calculated_mol_wt=96911
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <165..814
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..846
                     /gene="LOC121349827"
                     /coded_by="XM_041460601.1:1..2541"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekehflsk
      421 sggdctfihq fiecqnkiid eghltkveet kllkenqarv kesndlsdtl spskekssdd
      481 ttdaqmddqd lnepivkval lkdelqgaqs eteakqeiqq lhkelveaqe lartskqkcf
      541 elqalleeer kayrvqvees nkqinalqaq lrrlqeeien lrkekeneis ttrnelvsaq
      601 neilslqkva ekaaserdtd istlqaelqt vraeldrwrk dasdyekeiv tlqssfrlkc
      661 qqceeqqree asrlkdelek lkaewialea ecvklrkent sltselqrqe kelsssqkqs
      721 laltsdisvl emsrkelenq mgslkekhqr daaslktqls eaesqakdfq keyertqtvl
      781 selkakyeva eqqnqsltee lkqckenlkl lqekgnnrqw pwmpvmaalv avtavvlypg
      841 ltrasp
//
LOCUS       XP_041316541             844 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316541
VERSION     XP_041316541.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460607.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..844
                     /product="sarcolemmal membrane-associated protein isoform
                     X2"
                     /calculated_mol_wt=96726
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <163..812
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..844
                     /gene="LOC121349827"
                     /coded_by="XM_041460607.1:1..2535"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslgiqvd dfipkingst ekehflsksg
      421 gdctfihqfi ecqnkiideg hltkveetkl lkenqarvke sndlsdtlsp skekssddtt
      481 daqmddqdln epivkvallk delqgaqset eakqeiqqlh kelveaqela rtskqkcfel
      541 qalleeerka yrvqveesnk qinalqaqlr rlqeeienlr kekeneistt rnelvsaqne
      601 ilslqkvaek aaserdtdis tlqaelqtvr aeldrwrkda sdyekeivtl qssfrlkcqq
      661 ceeqqreeas rlkdeleklk aewialeaec vklrkentsl tselqrqeke lsssqkqsla
      721 ltsdisvlem srkelenqmg slkekhqrda aslktqlsea esqakdfqke yertqtvlse
      781 lkakyevaeq qnqslteelk qckenlkllq ekgnnrqwpw mpvmaalvav tavvlypglt
      841 rasp
//
LOCUS       XP_041316549             844 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316549
VERSION     XP_041316549.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460615.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..844
                     /product="sarcolemmal membrane-associated protein isoform
                     X3"
                     /calculated_mol_wt=96807
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <165..814
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..844
                     /gene="LOC121349827"
                     /coded_by="XM_041460615.1:1..2535"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekehflsk
      421 sggdctfihq fiecqnkiid eghltkveet kllkenqarv kesndlsdtl spskekssdd
      481 ttdaqmddqd lnepivkval lkdelqgaqs eteakqeiqq lhkelveaqe lartskqkcf
      541 elqalleeer kayrvqvees nkqinalqaq lrrlqeeien lrkekeneis ttrnelvsaq
      601 neilslqkva ekaaserdtd istlqaelqt vraeldrwrk dasdyekeiv tlqssfrlkc
      661 qqceeqqree asrlkdelek lkaewialea ecvklrkent sltselqrqe kelsssqkqs
      721 laltsdisvl emsrkelenq mgslkekhqr daaslktqls eaesqakdfq keyertqtvl
      781 selkakyeva eqqnqsltee lkqckenlkl lqekgnnpsi lqpvpavfig lilaflywcy
      841 gplw
//
LOCUS       XP_041316558             842 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316558
VERSION     XP_041316558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..842
                     /product="sarcolemmal membrane-associated protein isoform
                     X4"
                     /calculated_mol_wt=96622
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <163..812
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..842
                     /gene="LOC121349827"
                     /coded_by="XM_041460624.1:1..2529"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslgiqvd dfipkingst ekehflsksg
      421 gdctfihqfi ecqnkiideg hltkveetkl lkenqarvke sndlsdtlsp skekssddtt
      481 daqmddqdln epivkvallk delqgaqset eakqeiqqlh kelveaqela rtskqkcfel
      541 qalleeerka yrvqveesnk qinalqaqlr rlqeeienlr kekeneistt rnelvsaqne
      601 ilslqkvaek aaserdtdis tlqaelqtvr aeldrwrkda sdyekeivtl qssfrlkcqq
      661 ceeqqreeas rlkdeleklk aewialeaec vklrkentsl tselqrqeke lsssqkqsla
      721 ltsdisvlem srkelenqmg slkekhqrda aslktqlsea esqakdfqke yertqtvlse
      781 lkakyevaeq qnqslteelk qckenlkllq ekgnnpsilq pvpavfigli laflywcygp
      841 lw
//
LOCUS       XP_041316566             829 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316566
VERSION     XP_041316566.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460632.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..829
                     /product="sarcolemmal membrane-associated protein isoform
                     X5"
                     /calculated_mol_wt=94855
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..797
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..829
                     /gene="LOC121349827"
                     /coded_by="XM_041460632.1:1..2490"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq giqvddfipk ingstekehf lsksggdctf ihqfiecqnk
      421 iideghltkv eetkllkenq arvkesndls dtlspskeks sddttdaqmd dqdlnepivk
      481 vallkdelqg aqseteakqe iqqlhkelve aqelartskq kcfelqalle eerkayrvqv
      541 eesnkqinal qaqlrrlqee ienlrkeken eisttrnelv saqneilslq kvaekaaser
      601 dtdistlqae lqtvraeldr wrkdasdyek eivtlqssfr lkcqqceeqq reeasrlkde
      661 leklkaewia leaecvklrk entsltselq rqekelsssq kqslaltsdi svlemsrkel
      721 enqmgslkek hqrdaaslkt qlseaesqak dfqkeyertq tvlselkaky evaeqqnqsl
      781 teelkqcken lkllqekgnn rqwpwmpvma alvavtavvl ypgltrasp
//
LOCUS       XP_041316573             829 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316573
VERSION     XP_041316573.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460639.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..829
                     /product="sarcolemmal membrane-associated protein isoform
                     X6"
                     /calculated_mol_wt=95068
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..797
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..829
                     /gene="LOC121349827"
                     /coded_by="XM_041460639.1:1..2490"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslehf lsksggdctf ihqfiecqnk
      421 iideghltkv eetkllkenq arvkesndls dtlspskeks sddttdaqmd dqdlnepivk
      481 vallkdelqg aqseteakqe iqqlhkelve aqelartskq kcfelqalle eerkayrvqv
      541 eesnkqinal qaqlrrlqee ienlrkeken eisttrnelv saqneilslq kvaekaaser
      601 dtdistlqae lqtvraeldr wrkdasdyek eivtlqssfr lkcqqceeqq reeasrlkde
      661 leklkaewia leaecvklrk entsltselq rqekelsssq kqslaltsdi svlemsrkel
      721 enqmgslkek hqrdaaslkt qlseaesqak dfqkeyertq tvlselkaky evaeqqnqsl
      781 teelkqcken lkllqekgnn rqwpwmpvma alvavtavvl ypgltrasp
//
LOCUS       XP_041316579             827 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316579
VERSION     XP_041316579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..827
                     /product="sarcolemmal membrane-associated protein isoform
                     X7"
                     /calculated_mol_wt=94883
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..795
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..827
                     /gene="LOC121349827"
                     /coded_by="XM_041460645.1:1..2484"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslehfls ksggdctfih qfiecqnkii
      421 deghltkvee tkllkenqar vkesndlsdt lspskekssd dttdaqmddq dlnepivkva
      481 llkdelqgaq seteakqeiq qlhkelveaq elartskqkc felqalleee rkayrvqvee
      541 snkqinalqa qlrrlqeeie nlrkekenei sttrnelvsa qneilslqkv aekaaserdt
      601 distlqaelq tvraeldrwr kdasdyekei vtlqssfrlk cqqceeqqre easrlkdele
      661 klkaewiale aecvklrken tsltselqrq ekelsssqkq slaltsdisv lemsrkelen
      721 qmgslkekhq rdaaslktql seaesqakdf qkeyertqtv lselkakyev aeqqnqslte
      781 elkqckenlk llqekgnnrq wpwmpvmaal vavtavvlyp gltrasp
//
LOCUS       XP_041316585             827 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316585
VERSION     XP_041316585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..827
                     /product="sarcolemmal membrane-associated protein isoform
                     X8"
                     /calculated_mol_wt=94720
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <165..795
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..827
                     /gene="LOC121349827"
                     /coded_by="XM_041460651.1:1..2484"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekehflsk
      421 sggdctfihq fiecqknqar vkesndlsdt lspskekssd dttdaqmddq dlnepivkva
      481 llkdelqgaq seteakqeiq qlhkelveaq elartskqkc felqalleee rkayrvqvee
      541 snkqinalqa qlrrlqeeie nlrkekenei sttrnelvsa qneilslqkv aekaaserdt
      601 distlqaelq tvraeldrwr kdasdyekei vtlqssfrlk cqqceeqqre easrlkdele
      661 klkaewiale aecvklrken tsltselqrq ekelsssqkq slaltsdisv lemsrkelen
      721 qmgslkekhq rdaaslktql seaesqakdf qkeyertqtv lselkakyev aeqqnqslte
      781 elkqckenlk llqekgnnrq wpwmpvmaal vavtavvlyp gltrasp
//
LOCUS       XP_041316595             825 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316595
VERSION     XP_041316595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..825
                     /product="sarcolemmal membrane-associated protein isoform
                     X9"
                     /calculated_mol_wt=94779
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..795
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..825
                     /gene="LOC121349827"
                     /coded_by="XM_041460661.1:1..2478"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslehfls ksggdctfih qfiecqnkii
      421 deghltkvee tkllkenqar vkesndlsdt lspskekssd dttdaqmddq dlnepivkva
      481 llkdelqgaq seteakqeiq qlhkelveaq elartskqkc felqalleee rkayrvqvee
      541 snkqinalqa qlrrlqeeie nlrkekenei sttrnelvsa qneilslqkv aekaaserdt
      601 distlqaelq tvraeldrwr kdasdyekei vtlqssfrlk cqqceeqqre easrlkdele
      661 klkaewiale aecvklrken tsltselqrq ekelsssqkq slaltsdisv lemsrkelen
      721 qmgslkekhq rdaaslktql seaesqakdf qkeyertqtv lselkakyev aeqqnqslte
      781 elkqckenlk llqekgnnps ilqpvpavfi glilaflywc ygplw
//
LOCUS       XP_041316603             825 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316603
VERSION     XP_041316603.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460669.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..825
                     /product="sarcolemmal membrane-associated protein isoform
                     X10"
                     /calculated_mol_wt=94566
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..795
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..825
                     /gene="LOC121349827"
                     /coded_by="XM_041460669.1:1..2478"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqgi qvddfipkin gstekehfls ksggdctfih qfiecqnkii
      421 deghltkvee tkllkenqar vkesndlsdt lspskekssd dttdaqmddq dlnepivkva
      481 llkdelqgaq seteakqeiq qlhkelveaq elartskqkc felqalleee rkayrvqvee
      541 snkqinalqa qlrrlqeeie nlrkekenei sttrnelvsa qneilslqkv aekaaserdt
      601 distlqaelq tvraeldrwr kdasdyekei vtlqssfrlk cqqceeqqre easrlkdele
      661 klkaewiale aecvklrken tsltselqrq ekelsssqkq slaltsdisv lemsrkelen
      721 qmgslkekhq rdaaslktql seaesqakdf qkeyertqtv lselkakyev aeqqnqslte
      781 elkqckenlk llqekgnnps ilqpvpavfi glilaflywc ygplw
//
LOCUS       XP_041316613             825 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316613
VERSION     XP_041316613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..825
                     /product="sarcolemmal membrane-associated protein isoform
                     X11"
                     /calculated_mol_wt=94504
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..793
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..825
                     /gene="LOC121349827"
                     /coded_by="XM_041460679.1:1..2478"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekdkiide
      421 ghltkveetk llkenqarvk esndlsdtls pskekssddt tdaqmddqdl nepivkvall
      481 kdelqgaqse teakqeiqql hkelveaqel artskqkcfe lqalleeerk ayrvqveesn
      541 kqinalqaql rrlqeeienl rkekeneist trnelvsaqn eilslqkvae kaaserdtdi
      601 stlqaelqtv raeldrwrkd asdyekeivt lqssfrlkcq qceeqqreea srlkdelekl
      661 kaewialeae cvklrkents ltselqrqek elsssqkqsl altsdisvle msrkelenqm
      721 gslkekhqrd aaslktqlse aesqakdfqk eyertqtvls elkakyevae qqnqslteel
      781 kqckenlkll qekgnnrqwp wmpvmaalva vtavvlypgl trasp
//
LOCUS       XP_041316622             823 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X12 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316622
VERSION     XP_041316622.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460688.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..823
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..823
                     /product="sarcolemmal membrane-associated protein isoform
                     X12"
                     /calculated_mol_wt=94318
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..791
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..823
                     /gene="LOC121349827"
                     /coded_by="XM_041460688.1:1..2472"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslgiqvd dfipkingst ekdkiidegh
      421 ltkveetkll kenqarvkes ndlsdtlsps kekssddttd aqmddqdlne pivkvallkd
      481 elqgaqsete akqeiqqlhk elveaqelar tskqkcfelq alleeerkay rvqveesnkq
      541 inalqaqlrr lqeeienlrk ekeneisttr nelvsaqnei lslqkvaeka aserdtdist
      601 lqaelqtvra eldrwrkdas dyekeivtlq ssfrlkcqqc eeqqreeasr lkdeleklka
      661 ewialeaecv klrkentslt selqrqekel sssqkqslal tsdisvlems rkelenqmgs
      721 lkekhqrdaa slktqlseae sqakdfqkey ertqtvlsel kakyevaeqq nqslteelkq
      781 ckenlkllqe kgnnrqwpwm pvmaalvavt avvlypgltr asp
//
LOCUS       XP_041316630             821 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X13 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316630
VERSION     XP_041316630.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460696.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..821
                     /product="sarcolemmal membrane-associated protein isoform
                     X13"
                     /calculated_mol_wt=94214
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..791
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..821
                     /gene="LOC121349827"
                     /coded_by="XM_041460696.1:1..2466"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslgiqvd dfipkingst ekdkiidegh
      421 ltkveetkll kenqarvkes ndlsdtlsps kekssddttd aqmddqdlne pivkvallkd
      481 elqgaqsete akqeiqqlhk elveaqelar tskqkcfelq alleeerkay rvqveesnkq
      541 inalqaqlrr lqeeienlrk ekeneisttr nelvsaqnei lslqkvaeka aserdtdist
      601 lqaelqtvra eldrwrkdas dyekeivtlq ssfrlkcqqc eeqqreeasr lkdeleklka
      661 ewialeaecv klrkentslt selqrqekel sssqkqslal tsdisvlems rkelenqmgs
      721 lkekhqrdaa slktqlseae sqakdfqkey ertqtvlsel kakyevaeqq nqslteelkq
      781 ckenlkllqe kgnnpsilqp vpavfiglil aflywcygpl w
//
LOCUS       XP_041316640             810 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X14 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316640
VERSION     XP_041316640.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460706.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..810
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..810
                     /product="sarcolemmal membrane-associated protein isoform
                     X14"
                     /calculated_mol_wt=92877
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..778
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..810
                     /gene="LOC121349827"
                     /coded_by="XM_041460706.1:1..2433"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslehf lsksggdctf ihqfiecqkn
      421 qarvkesndl sdtlspskek ssddttdaqm ddqdlnepiv kvallkdelq gaqseteakq
      481 eiqqlhkelv eaqelartsk qkcfelqall eeerkayrvq veesnkqina lqaqlrrlqe
      541 eienlrkeke neisttrnel vsaqneilsl qkvaekaase rdtdistlqa elqtvraeld
      601 rwrkdasdye keivtlqssf rlkcqqceeq qreeasrlkd eleklkaewi aleaecvklr
      661 kentsltsel qrqekelsss qkqslaltsd isvlemsrke lenqmgslke khqrdaaslk
      721 tqlseaesqa kdfqkeyert qtvlselkak yevaeqqnqs lteelkqcke nlkllqekgn
      781 nrqwpwmpvm aalvavtavv lypgltrasp
//
LOCUS       XP_041316648             808 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X15 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316648
VERSION     XP_041316648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..808
                     /product="sarcolemmal membrane-associated protein isoform
                     X15"
                     /calculated_mol_wt=92661
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..776
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..808
                     /gene="LOC121349827"
                     /coded_by="XM_041460714.1:1..2427"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnsldki ideghltkve etkllkenqa
      421 rvkesndlsd tlspskekss ddttdaqmdd qdlnepivkv allkdelqga qseteakqei
      481 qqlhkelvea qelartskqk cfelqallee erkayrvqve esnkqinalq aqlrrlqeei
      541 enlrkekene isttrnelvs aqneilslqk vaekaaserd tdistlqael qtvraeldrw
      601 rkdasdyeke ivtlqssfrl kcqqceeqqr eeasrlkdel eklkaewial eaecvklrke
      661 ntsltselqr qekelsssqk qslaltsdis vlemsrkele nqmgslkekh qrdaaslktq
      721 lseaesqakd fqkeyertqt vlselkakye vaeqqnqslt eelkqckenl kllqekgnnr
      781 qwpwmpvmaa lvavtavvly pgltrasp
//
LOCUS       XP_041316658             808 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X16 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316658
VERSION     XP_041316658.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460724.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..808
                     /product="sarcolemmal membrane-associated protein isoform
                     X16"
                     /calculated_mol_wt=92447
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..776
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..808
                     /gene="LOC121349827"
                     /coded_by="XM_041460724.1:1..2427"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq giqvddfipk ingstekdki ideghltkve etkllkenqa
      421 rvkesndlsd tlspskekss ddttdaqmdd qdlnepivkv allkdelqga qseteakqei
      481 qqlhkelvea qelartskqk cfelqallee erkayrvqve esnkqinalq aqlrrlqeei
      541 enlrkekene isttrnelvs aqneilslqk vaekaaserd tdistlqael qtvraeldrw
      601 rkdasdyeke ivtlqssfrl kcqqceeqqr eeasrlkdel eklkaewial eaecvklrke
      661 ntsltselqr qekelsssqk qslaltsdis vlemsrkele nqmgslkekh qrdaaslktq
      721 lseaesqakd fqkeyertqt vlselkakye vaeqqnqslt eelkqckenl kllqekgnnr
      781 qwpwmpvmaa lvavtavvly pgltrasp
//
LOCUS       XP_041316668             806 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X17 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316668
VERSION     XP_041316668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="sarcolemmal membrane-associated protein isoform
                     X17"
                     /calculated_mol_wt=92475
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..774
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..806
                     /gene="LOC121349827"
                     /coded_by="XM_041460734.1:1..2421"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnsldkiid eghltkveet kllkenqarv
      421 kesndlsdtl spskekssdd ttdaqmddqd lnepivkval lkdelqgaqs eteakqeiqq
      481 lhkelveaqe lartskqkcf elqalleeer kayrvqvees nkqinalqaq lrrlqeeien
      541 lrkekeneis ttrnelvsaq neilslqkva ekaaserdtd istlqaelqt vraeldrwrk
      601 dasdyekeiv tlqssfrlkc qqceeqqree asrlkdelek lkaewialea ecvklrkent
      661 sltselqrqe kelsssqkqs laltsdisvl emsrkelenq mgslkekhqr daaslktqls
      721 eaesqakdfq keyertqtvl selkakyeva eqqnqsltee lkqckenlkl lqekgnnrqw
      781 pwmpvmaalv avtavvlypg ltrasp
//
LOCUS       XP_041316676             806 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X18 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316676
VERSION     XP_041316676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="sarcolemmal membrane-associated protein isoform
                     X18"
                     /calculated_mol_wt=92312
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..774
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..806
                     /gene="LOC121349827"
                     /coded_by="XM_041460742.1:1..2421"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekenqarv
      421 kesndlsdtl spskekssdd ttdaqmddqd lnepivkval lkdelqgaqs eteakqeiqq
      481 lhkelveaqe lartskqkcf elqalleeer kayrvqvees nkqinalqaq lrrlqeeien
      541 lrkekeneis ttrnelvsaq neilslqkva ekaaserdtd istlqaelqt vraeldrwrk
      601 dasdyekeiv tlqssfrlkc qqceeqqree asrlkdelek lkaewialea ecvklrkent
      661 sltselqrqe kelsssqkqs laltsdisvl emsrkelenq mgslkekhqr daaslktqls
      721 eaesqakdfq keyertqtvl selkakyeva eqqnqsltee lkqckenlkl lqekgnnrqw
      781 pwmpvmaalv avtavvlypg ltrasp
//
LOCUS       XP_041316684             805 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X19 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316684
VERSION     XP_041316684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..805
                     /product="sarcolemmal membrane-associated protein isoform
                     X19"
                     /calculated_mol_wt=92186
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <165..>773
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..805
                     /gene="LOC121349827"
                     /coded_by="XM_041460750.1:1..2418"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekehflsk
      421 sggdctfihq fiecqnkiid eghltkveet kllkenqarv kesndlsdtl spskekssdd
      481 ttdaqmddqd lnepivkval lkalleeerk ayrvqveesn kqinalqaql rrlqeeienl
      541 rkekeneist trnelvsaqn eilslqkvae kaaserdtdi stlqaelqtv raeldrwrkd
      601 asdyekeivt lqssfrlkcq qceeqqreea srlkdelekl kaewialeae cvklrkents
      661 ltselqrqek elsssqkqsl altsdisvle msrkelenqm gslkekhqrd aaslktqlse
      721 aesqakdfqk eyertqtvls elkakyevae qqnqslteel kqckenlkll qekgnnrqwp
      781 wmpvmaalva vtavvlypgl trasp
//
LOCUS       XP_041316692             804 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X20 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316692
VERSION     XP_041316692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..804
                     /product="sarcolemmal membrane-associated protein isoform
                     X20"
                     /calculated_mol_wt=92371
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..774
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..804
                     /gene="LOC121349827"
                     /coded_by="XM_041460758.1:1..2415"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnsldkiid eghltkveet kllkenqarv
      421 kesndlsdtl spskekssdd ttdaqmddqd lnepivkval lkdelqgaqs eteakqeiqq
      481 lhkelveaqe lartskqkcf elqalleeer kayrvqvees nkqinalqaq lrrlqeeien
      541 lrkekeneis ttrnelvsaq neilslqkva ekaaserdtd istlqaelqt vraeldrwrk
      601 dasdyekeiv tlqssfrlkc qqceeqqree asrlkdelek lkaewialea ecvklrkent
      661 sltselqrqe kelsssqkqs laltsdisvl emsrkelenq mgslkekhqr daaslktqls
      721 eaesqakdfq keyertqtvl selkakyeva eqqnqsltee lkqckenlkl lqekgnnpsi
      781 lqpvpavfig lilaflywcy gplw
//
LOCUS       XP_041316702             803 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X21 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316702
VERSION     XP_041316702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..803
                     /product="sarcolemmal membrane-associated protein isoform
                     X21"
                     /calculated_mol_wt=92082
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <165..>773
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..803
                     /gene="LOC121349827"
                     /coded_by="XM_041460768.1:1..2412"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekehflsk
      421 sggdctfihq fiecqnkiid eghltkveet kllkenqarv kesndlsdtl spskekssdd
      481 ttdaqmddqd lnepivkval lkalleeerk ayrvqveesn kqinalqaql rrlqeeienl
      541 rkekeneist trnelvsaqn eilslqkvae kaaserdtdi stlqaelqtv raeldrwrkd
      601 asdyekeivt lqssfrlkcq qceeqqreea srlkdelekl kaewialeae cvklrkents
      661 ltselqrqek elsssqkqsl altsdisvle msrkelenqm gslkekhqrd aaslktqlse
      721 aesqakdfqk eyertqtvls elkakyevae qqnqslteel kqckenlkll qekgnnpsil
      781 qpvpavfigl ilaflywcyg plw
//
LOCUS       XP_041316712             801 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X22 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316712
VERSION     XP_041316712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..801
                     /product="sarcolemmal membrane-associated protein isoform
                     X22"
                     /calculated_mol_wt=91897
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <163..>771
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..801
                     /gene="LOC121349827"
                     /coded_by="XM_041460778.1:1..2406"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslgiqvd dfipkingst ekehflsksg
      421 gdctfihqfi ecqnkiideg hltkveetkl lkenqarvke sndlsdtlsp skekssddtt
      481 daqmddqdln epivkvallk alleeerkay rvqveesnkq inalqaqlrr lqeeienlrk
      541 ekeneisttr nelvsaqnei lslqkvaeka aserdtdist lqaelqtvra eldrwrkdas
      601 dyekeivtlq ssfrlkcqqc eeqqreeasr lkdeleklka ewialeaecv klrkentslt
      661 selqrqekel sssqkqslal tsdisvlems rkelenqmgs lkekhqrdaa slktqlseae
      721 sqakdfqkey ertqtvlsel kakyevaeqq nqslteelkq ckenlkllqe kgnnpsilqp
      781 vpavfiglil aflywcygpl w
//
LOCUS       XP_041316720             791 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X23 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316720
VERSION     XP_041316720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460786.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..791
                     /product="sarcolemmal membrane-associated protein isoform
                     X23"
                     /calculated_mol_wt=90604
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..759
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..791
                     /gene="LOC121349827"
                     /coded_by="XM_041460786.1:1..2376"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq dkiideghlt kveetkllke nqarvkesnd lsdtlspske
      421 kssddttdaq mddqdlnepi vkvallkdel qgaqseteak qeiqqlhkel veaqelarts
      481 kqkcfelqal leeerkayrv qveesnkqin alqaqlrrlq eeienlrkek eneisttrne
      541 lvsaqneils lqkvaekaas erdtdistlq aelqtvrael drwrkdasdy ekeivtlqss
      601 frlkcqqcee qqreeasrlk deleklkaew ialeaecvkl rkentsltse lqrqekelss
      661 sqkqslalts disvlemsrk elenqmgslk ekhqrdaasl ktqlseaesq akdfqkeyer
      721 tqtvlselka kyevaeqqnq slteelkqck enlkllqekg nnrqwpwmpv maalvavtav
      781 vlypgltras p
//
LOCUS       XP_041316727             789 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X24 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316727
VERSION     XP_041316727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..789
                     /product="sarcolemmal membrane-associated protein isoform
                     X24"
                     /calculated_mol_wt=90419
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..757
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..789
                     /gene="LOC121349827"
                     /coded_by="XM_041460793.1:1..2370"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqdk iideghltkv eetkllkenq arvkesndls dtlspskeks
      421 sddttdaqmd dqdlnepivk vallkdelqg aqseteakqe iqqlhkelve aqelartskq
      481 kcfelqalle eerkayrvqv eesnkqinal qaqlrrlqee ienlrkeken eisttrnelv
      541 saqneilslq kvaekaaser dtdistlqae lqtvraeldr wrkdasdyek eivtlqssfr
      601 lkcqqceeqq reeasrlkde leklkaewia leaecvklrk entsltselq rqekelsssq
      661 kqslaltsdi svlemsrkel enqmgslkek hqrdaaslkt qlseaesqak dfqkeyertq
      721 tvlselkaky evaeqqnqsl teelkqcken lkllqekgnn rqwpwmpvma alvavtavvl
      781 ypgltrasp
//
LOCUS       XP_041316736             789 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X25 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316736
VERSION     XP_041316736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..789
                     /product="sarcolemmal membrane-associated protein isoform
                     X25"
                     /calculated_mol_wt=90469
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..757
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..789
                     /gene="LOC121349827"
                     /coded_by="XM_041460802.1:1..2370"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslenq arvkesndls dtlspskeks
      421 sddttdaqmd dqdlnepivk vallkdelqg aqseteakqe iqqlhkelve aqelartskq
      481 kcfelqalle eerkayrvqv eesnkqinal qaqlrrlqee ienlrkeken eisttrnelv
      541 saqneilslq kvaekaaser dtdistlqae lqtvraeldr wrkdasdyek eivtlqssfr
      601 lkcqqceeqq reeasrlkde leklkaewia leaecvklrk entsltselq rqekelsssq
      661 kqslaltsdi svlemsrkel enqmgslkek hqrdaaslkt qlseaesqak dfqkeyertq
      721 tvlselkaky evaeqqnqsl teelkqcken lkllqekgnn rqwpwmpvma alvavtavvl
      781 ypgltrasp
//
LOCUS       XP_041316745             789 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X26 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316745
VERSION     XP_041316745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..789
                     /product="sarcolemmal membrane-associated protein isoform
                     X26"
                     /calculated_mol_wt=90256
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..757
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..789
                     /gene="LOC121349827"
                     /coded_by="XM_041460811.1:1..2370"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq giqvddfipk ingstekenq arvkesndls dtlspskeks
      421 sddttdaqmd dqdlnepivk vallkdelqg aqseteakqe iqqlhkelve aqelartskq
      481 kcfelqalle eerkayrvqv eesnkqinal qaqlrrlqee ienlrkeken eisttrnelv
      541 saqneilslq kvaekaaser dtdistlqae lqtvraeldr wrkdasdyek eivtlqssfr
      601 lkcqqceeqq reeasrlkde leklkaewia leaecvklrk entsltselq rqekelsssq
      661 kqslaltsdi svlemsrkel enqmgslkek hqrdaaslkt qlseaesqak dfqkeyertq
      721 tvlselkaky evaeqqnqsl teelkqcken lkllqekgnn rqwpwmpvma alvavtavvl
      781 ypgltrasp
//
LOCUS       XP_041316751             787 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X27 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316751
VERSION     XP_041316751.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460817.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..787
                     /product="sarcolemmal membrane-associated protein isoform
                     X27"
                     /calculated_mol_wt=90315
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..757
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..787
                     /gene="LOC121349827"
                     /coded_by="XM_041460817.1:1..2364"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqdk iideghltkv eetkllkenq arvkesndls dtlspskeks
      421 sddttdaqmd dqdlnepivk vallkdelqg aqseteakqe iqqlhkelve aqelartskq
      481 kcfelqalle eerkayrvqv eesnkqinal qaqlrrlqee ienlrkeken eisttrnelv
      541 saqneilslq kvaekaaser dtdistlqae lqtvraeldr wrkdasdyek eivtlqssfr
      601 lkcqqceeqq reeasrlkde leklkaewia leaecvklrk entsltselq rqekelsssq
      661 kqslaltsdi svlemsrkel enqmgslkek hqrdaaslkt qlseaesqak dfqkeyertq
      721 tvlselkaky evaeqqnqsl teelkqcken lkllqekgnn psilqpvpav figlilafly
      781 wcygplw
//
LOCUS       XP_041316759             784 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X28 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316759
VERSION     XP_041316759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..784
                     /product="sarcolemmal membrane-associated protein isoform
                     X28"
                     /calculated_mol_wt=90054
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..>754
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..784
                     /gene="LOC121349827"
                     /coded_by="XM_041460825.1:1..2355"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslehfls ksggdctfih qfiecqnkii
      421 deghltkvee tkllkenqar vkesndlsdt lspskekssd dttdaqmddq dlnepivkva
      481 llkalleeer kayrvqvees nkqinalqaq lrrlqeeien lrkekeneis ttrnelvsaq
      541 neilslqkva ekaaserdtd istlqaelqt vraeldrwrk dasdyekeiv tlqssfrlkc
      601 qqceeqqree asrlkdelek lkaewialea ecvklrkent sltselqrqe kelsssqkqs
      661 laltsdisvl emsrkelenq mgslkekhqr daaslktqls eaesqakdfq keyertqtvl
      721 selkakyeva eqqnqsltee lkqckenlkl lqekgnnpsi lqpvpavfig lilaflywcy
      781 gplw
//
LOCUS       XP_041316770             784 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X29 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316770
VERSION     XP_041316770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..784
                     /product="sarcolemmal membrane-associated protein isoform
                     X29"
                     /calculated_mol_wt=89840
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..>754
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..784
                     /gene="LOC121349827"
                     /coded_by="XM_041460836.1:1..2355"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqgi qvddfipkin gstekehfls ksggdctfih qfiecqnkii
      421 deghltkvee tkllkenqar vkesndlsdt lspskekssd dttdaqmddq dlnepivkva
      481 llkalleeer kayrvqvees nkqinalqaq lrrlqeeien lrkekeneis ttrnelvsaq
      541 neilslqkva ekaaserdtd istlqaelqt vraeldrwrk dasdyekeiv tlqssfrlkc
      601 qqceeqqree asrlkdelek lkaewialea ecvklrkent sltselqrqe kelsssqkqs
      661 laltsdisvl emsrkelenq mgslkekhqr daaslktqls eaesqakdfq keyertqtvl
      721 selkakyeva eqqnqsltee lkqckenlkl lqekgnnpsi lqpvpavfig lilaflywcy
      781 gplw
//
LOCUS       XP_041316778             780 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X30 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316778
VERSION     XP_041316778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460844.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..780
                     /product="sarcolemmal membrane-associated protein isoform
                     X30"
                     /calculated_mol_wt=89489
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..>750
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..780
                     /gene="LOC121349827"
                     /coded_by="XM_041460844.1:1..2343"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnslgiqvd dfipkingst ekdkiidegh
      421 ltkveetkll kenqarvkes ndlsdtlsps kekssddttd aqmddqdlne pivkvallka
      481 lleeerkayr vqveesnkqi nalqaqlrrl qeeienlrke keneisttrn elvsaqneil
      541 slqkvaekaa serdtdistl qaelqtvrae ldrwrkdasd yekeivtlqs sfrlkcqqce
      601 eqqreeasrl kdeleklkae wialeaecvk lrkentslts elqrqekels ssqkqslalt
      661 sdisvlemsr kelenqmgsl kekhqrdaas lktqlseaes qakdfqkeye rtqtvlselk
      721 akyevaeqqn qslteelkqc kenlkllqek gnnpsilqpv pavfiglila flywcygplw
//
LOCUS       XP_041316786             780 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X31 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316786
VERSION     XP_041316786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..780
                     /product="sarcolemmal membrane-associated protein isoform
                     X31"
                     /calculated_mol_wt=89245
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <165..>748
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..780
                     /gene="LOC121349827"
                     /coded_by="XM_041460852.1:1..2343"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq vrlehlqekt lkehnslgiq vddfipking stekehflsk
      421 sggdctfihq fiecqnkiid eghltkveet kllkenqarv kesndlsdtl spskekssdd
      481 ttdaqmddqd lnepivkval lkaqlrrlqe eienlrkeke neisttrnel vsaqneilsl
      541 qkvaekaase rdtdistlqa elqtvraeld rwrkdasdye keivtlqssf rlkcqqceeq
      601 qreeasrlkd eleklkaewi aleaecvklr kentsltsel qrqekelsss qkqslaltsd
      661 isvlemsrke lenqmgslke khqrdaaslk tqlseaesqa kdfqkeyert qtvlselkak
      721 yevaeqqnqs lteelkqcke nlkllqekgn nrqwpwmpvm aalvavtavv lypgltrasp
//
LOCUS       XP_041316796             772 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X32 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316796
VERSION     XP_041316796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="sarcolemmal membrane-associated protein isoform
                     X32"
                     /calculated_mol_wt=88413
     Region          3..132
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <158..740
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          165..227
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(173,176..177,180,183..184,187,191,194,197..198,
                     201..202,204..205)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..772
                     /gene="LOC121349827"
                     /coded_by="XM_041460862.1:1..2319"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkgkvth
      121 gcivstiklf lpdgmearlr sdvihaplps pvdkvaantp smysqelfql sqylqealhr
      181 eqmleqklat lqrllavtqe asdtswqali dedrllsrle vmgnqlqacs knqtedsirk
      241 elialqedkh nyettakesl rrvlqekiev vrklsevers lsntedecth lkemnertqe
      301 elrelankyn gavneikdls dklkvaegrq eeiqqkglae kkelqhkide meereqelqa
      361 kiealqadnd ftnerltalq enqarvkesn dlsdtlspsk ekssddttda qmddqdlnep
      421 ivkvallkde lqgaqsetea kqeiqqlhke lveaqelart skqkcfelqa lleeerkayr
      481 vqveesnkqi nalqaqlrrl qeeienlrke keneisttrn elvsaqneil slqkvaekaa
      541 serdtdistl qaelqtvrae ldrwrkdasd yekeivtlqs sfrlkcqqce eqqreeasrl
      601 kdeleklkae wialeaecvk lrkentslts elqrqekels ssqkqslalt sdisvlemsr
      661 kelenqmgsl kekhqrdaas lktqlseaes qakdfqkeye rtqtvlselk akyevaeqqn
      721 qslteelkqc kenlkllqek gnnrqwpwmp vmaalvavta vvlypgltra sp
//
LOCUS       XP_041316804             763 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X33 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316804
VERSION     XP_041316804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="sarcolemmal membrane-associated protein isoform
                     X33"
                     /calculated_mol_wt=87646
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <163..>733
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..763
                     /gene="LOC121349827"
                     /coded_by="XM_041460870.1:1..2292"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqvr lehlqektlk ehnsldkiid eghltkveet kllkenqarv
      421 kesndlsdtl spskekssdd ttdaqmddqd lnepivkval lkalleeerk ayrvqveesn
      481 kqinalqaql rrlqeeienl rkekeneist trnelvsaqn eilslqkvae kaaserdtdi
      541 stlqaelqtv raeldrwrkd asdyekeivt lqssfrlkcq qceeqqreea srlkdelekl
      601 kaewialeae cvklrkents ltselqrqek elsssqkqsl altsdisvle msrkelenqm
      661 gslkekhqrd aaslktqlse aesqakdfqk eyertqtvls elkakyevae qqnqslteel
      721 kqckenlkll qekgnnpsil qpvpavfigl ilaflywcyg plw
//
LOCUS       XP_041316814             749 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X34 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316814
VERSION     XP_041316814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..749
                     /product="sarcolemmal membrane-associated protein isoform
                     X34"
                     /calculated_mol_wt=85892
     Region          <2..35
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Region          <68..717
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          68..130
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(76,79..80,83,86..87,90,94,97,100..101,104..105,
                     107..108)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..749
                     /gene="LOC121349827"
                     /coded_by="XM_041460880.1:241..2490"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 msgdiiqfgv dvtentrkgk vthgcivsti klflpdgmea rlrsdvihap lpspvdkvaa
       61 ntpsmysqel fqlsqylqea lhreqmleqk latlqrllav tqeasdtswq alidedrlls
      121 rlevmgnqlq acsknqteds irkelialqe dkhnyettak eslrrvlqek ievvrklsev
      181 erslsntede cthlkemner tqeelrelan kyngavneik dlsdklkvae grqeeiqqkg
      241 laekkelqhk idemeereqe lqakiealqa dndftnerlt alqvrlehlq ektlkehnsl
      301 giqvddfipk ingstekehf lsksggdctf ihqfiecqnk iideghltkv eetkllkenq
      361 arvkesndls dtlspskeks sddttdaqmd dqdlnepivk vallkdelqg aqseteakqe
      421 iqqlhkelve aqelartskq kcfelqalle eerkayrvqv eesnkqinal qaqlrrlqee
      481 ienlrkeken eisttrnelv saqneilslq kvaekaaser dtdistlqae lqtvraeldr
      541 wrkdasdyek eivtlqssfr lkcqqceeqq reeasrlkde leklkaewia leaecvklrk
      601 entsltselq rqekelsssq kqslaltsdi svlemsrkel enqmgslkek hqrdaaslkt
      661 qlseaesqak dfqkeyertq tvlselkaky evaeqqnqsl teelkqcken lkllqekgnn
      721 rqwpwmpvma alvavtavvl ypgltrasp
//
LOCUS       XP_041316823             746 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X35 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316823
VERSION     XP_041316823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..746
                     /product="sarcolemmal membrane-associated protein isoform
                     X35"
                     /calculated_mol_wt=85590
     Region          3..130
                     /region_name="FHA_SLMAP"
                     /note="forkhead associated (FHA) domain found in
                     sarcolemmal membrane-associated protein (SLMAP) and
                     similar proteins; cd22679"
                     /db_xref="CDD:438731"
     Site            order(31..33,50..53,55,74..77,107..109)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438731"
     Region          <156..>716
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          163..225
                     /region_name="CC1_SLMAP"
                     /note="first coiled-coil (CC1) domain found in Sarcolemmal
                     membrane-associated protein; cd21911"
                     /db_xref="CDD:409287"
     Site            order(171,174..175,178,181..182,185,189,192,195..196,
                     199..200,202..203)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:409287"
     CDS             1..746
                     /gene="LOC121349827"
                     /coded_by="XM_041460889.1:1..2241"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpsalaiftc rpnshpfqer hvyldepvki grsvarcrpa qnnatfdckv lsrnhalvwf
       61 dhktgkfylq dtkssngtfi nsqrlsrgse esppceimsg diiqfgvdvt entrkvthgc
      121 ivstiklflp dgmearlrsd vihaplpspv dkvaantpsm ysqelfqlsq ylqealhreq
      181 mleqklatlq rllavtqeas dtswqalide drllsrlevm gnqlqacskn qtedsirkel
      241 ialqedkhny ettakeslrr vlqekievvr klseversls ntedecthlk emnertqeel
      301 relankynga vneikdlsdk lkvaegrqee iqqkglaekk elqhkideme ereqelqaki
      361 ealqadndft nerltalqdk iideghltkv eetkllkenq arvkesndls dtlspskeks
      421 sddttdaqmd dqdlnepivk vallkallee erkayrvqve esnkqinalq aqlrrlqeei
      481 enlrkekene isttrnelvs aqneilslqk vaekaaserd tdistlqael qtvraeldrw
      541 rkdasdyeke ivtlqssfrl kcqqceeqqr eeasrlkdel eklkaewial eaecvklrke
      601 ntsltselqr qekelsssqk qslaltsdis vlemsrkele nqmgslkekh qrdaaslktq
      661 lseaesqakd fqkeyertqt vlselkakye vaeqqnqslt eelkqckenl kllqekgnnp
      721 silqpvpavf iglilaflyw cygplw
//
LOCUS       XP_041316830             396 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X36 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316830
VERSION     XP_041316830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..396
                     /product="sarcolemmal membrane-associated protein isoform
                     X36"
                     /calculated_mol_wt=45486
     Region          <56..364
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..396
                     /gene="LOC121349827"
                     /coded_by="XM_041460896.1:34..1224"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 mpryenqarv kesndlsdtl spskekssdd ttdaqmddqd lnepivkval lkdelqgaqs
       61 eteakqeiqq lhkelveaqe lartskqkcf elqalleeer kayrvqvees nkqinalqaq
      121 lrrlqeeien lrkekeneis ttrnelvsaq neilslqkva ekaaserdtd istlqaelqt
      181 vraeldrwrk dasdyekeiv tlqssfrlkc qqceeqqree asrlkdelek lkaewialea
      241 ecvklrkent sltselqrqe kelsssqkqs laltsdisvl emsrkelenq mgslkekhqr
      301 daaslktqls eaesqakdfq keyertqtvl selkakyeva eqqnqsltee lkqckenlkl
      361 lqekgnnrqw pwmpvmaalv avtavvlypg ltrasp
//
LOCUS       XP_041316839             393 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcolemmal membrane-associated protein isoform X37 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041316839
VERSION     XP_041316839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="sarcolemmal membrane-associated protein isoform
                     X37"
                     /calculated_mol_wt=45070
     Region          <53..361
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..393
                     /gene="LOC121349827"
                     /coded_by="XM_041460905.1:169..1350"
                     /db_xref="GeneID:121349827"
ORIGIN      
        1 menqarvkes ndlsdtlsps kekssddttd aqmddqdlne pivkvallkd elqgaqsete
       61 akqeiqqlhk elveaqelar tskqkcfelq alleeerkay rvqveesnkq inalqaqlrr
      121 lqeeienlrk ekeneisttr nelvsaqnei lslqkvaeka aserdtdist lqaelqtvra
      181 eldrwrkdas dyekeivtlq ssfrlkcqqc eeqqreeasr lkdeleklka ewialeaecv
      241 klrkentslt selqrqekel sssqkqslal tsdisvlems rkelenqmgs lkekhqrdaa
      301 slktqlseae sqakdfqkey ertqtvlsel kakyevaeqq nqslteelkq ckenlkllqe
      361 kgnnrqwpwm pvmaalvavt avvlypgltr asp
//
LOCUS       XP_041316860             506 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerate kinase [Pyrgilauda ruficollis].
ACCESSION   XP_041316860
VERSION     XP_041316860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460926.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..506
                     /product="glycerate kinase"
                     /calculated_mol_wt=52923
     Region          2..500
                     /region_name="GckA"
                     /note="Glycerate-2-kinase [Carbohydrate transport and
                     metabolism]; COG2379"
                     /db_xref="CDD:441946"
     CDS             1..506
                     /gene="GLYCTK"
                     /coded_by="XM_041460926.1:188..1708"
                     /db_xref="GeneID:121350004"
ORIGIN      
        1 mslrehalsl frgalgtvrp apmlrralkl qgdgcpqllv kgqafpvkrd lylvgfgkav
       61 lgmaaaaeei lgdhltrgii nvplgiqesl qragmqemll kphsriqvie gaknnlpdae
      121 tlkgavaiqe laegltaddl llvlisgggs allpapippi lleekekltk mlasrgaaiq
      181 elnivrktls vlkggglaql ahparvvsli lsdvigdpld iiasgptaas shsvqdclqi
      241 ltkynllhdl pksvemvlss sptkptapen yshvsniilg sntvaleear cqaeglgyaa
      301 lllsaavrge vgrvatlycq liqlvclgfa slgegplgdq lrgnvlqlaa elqipgldld
      361 eflqalrglg pdrpvcilag gettvqlqgt gkggrnqela lrvglglhka qatgasspqg
      421 rceilflsgg tdgqdgptea agafcspglv aealqegldv eaflrnndsy tffsqfqggh
      481 hllvtgltgt nvmdiqaili raveks
//
LOCUS       XP_041316873             313 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 82 [Pyrgilauda ruficollis].
ACCESSION   XP_041316873
VERSION     XP_041316873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460939.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="WD repeat-containing protein 82"
                     /calculated_mol_wt=34974
     Region          <5..302
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          24..61
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          67..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          197..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          285..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..313
                     /gene="WDR82"
                     /coded_by="XM_041460939.1:210..1151"
                     /db_xref="GeneID:121350011"
ORIGIN      
        1 mkltdnvlrs frvakvfren sdkincfdfs pngetvisss dddsivlydc qegkpkrtly
       61 skkygvdlir ythaantvvy ssnkiddtir ylslhdnkyi ryfpghtkrv valsmspvdd
      121 tfisgsldkt irlwdlrspn cqglmhlqgk pvcsfdpegl ifaagvnsem vklydlrsfd
      181 kgpfatfkmq ydrtcewtgl kfsndgklil istnggfirl idafkgavlh tfggynnska
      241 vtleasftpd sqfimigsed gkihvwnges gmkvavldgk htgpitclqf npkfmtfasa
      301 csnmafwlpt idd
//
LOCUS       XP_041316884             313 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 82 [Pyrgilauda ruficollis].
ACCESSION   XP_041316884
VERSION     XP_041316884.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460950.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="WD repeat-containing protein 82"
                     /calculated_mol_wt=34974
     Region          <5..302
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          24..61
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          67..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          110..148
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          153..190
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          197..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          285..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..313
                     /gene="WDR82"
                     /coded_by="XM_041460950.1:210..1151"
                     /db_xref="GeneID:121350011"
ORIGIN      
        1 mkltdnvlrs frvakvfren sdkincfdfs pngetvisss dddsivlydc qegkpkrtly
       61 skkygvdlir ythaantvvy ssnkiddtir ylslhdnkyi ryfpghtkrv valsmspvdd
      121 tfisgsldkt irlwdlrspn cqglmhlqgk pvcsfdpegl ifaagvnsem vklydlrsfd
      181 kgpfatfkmq ydrtcewtgl kfsndgklil istnggfirl idafkgavlh tfggynnska
      241 vtleasftpd sqfimigsed gkihvwnges gmkvavldgk htgpitclqf npkfmtfasa
      301 csnmafwlpt idd
//
LOCUS       XP_041316898             683 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041316898
VERSION     XP_041316898.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460964.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..683
                     /product="forkhead box protein P1 isoform X1"
                     /calculated_mol_wt=76197
     Region          308..375
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          443..>632
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          470..551
                     /region_name="FH_FOXP2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P2 (FOXP2); cd20065"
                     /db_xref="CDD:410839"
     Site            order(475..482,484,486,490..494,498,500..502,504..505,
                     507..508,510,515..516,518..520,522..523,529,532,538..542,
                     544,547)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410839"
     Site            order(507,510,514,517,520..521,524,549..550)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410839"
     CDS             1..683
                     /gene="FOXP1"
                     /coded_by="XM_041460964.1:316..2367"
                     /db_xref="GeneID:121350019"
ORIGIN      
        1 mmqesgtetk sngsaiqnga sggnhllecs lrevrsnget psveigaadl ahlqqqqalq
       61 varqlllqqq qqqqqqqqqq qvsglkspkr ndkqpalqvp vsvammtpqv itpqqmqqil
      121 qqqvltpqql qvllqqqqal mlqqqqlqef ykkqqeqlql qllqqqhagk qpkepqqqqv
      181 atqqlafqqq llqmqqlqqq hllslqrqgl ltiqpgqptl plqplaqgmi ptelqqlwke
      241 vtsshtaeea asnnhssldl sttcvsssap sktsliinph astngqlsvh tpkreslshe
      301 ehshshplyg hgvckwpgce avcedfqsfl khlnsehald drstaqcrvq mqvvqqlelq
      361 lakdkerlqa mmthlhvkst epkatpqpln lvssvtlskt aseaspqslp htpttptapi
      421 tpvtqgpsvi tttsmhnvgp irrrysdkyn vpissadiaq nqefyknaev rppftyasli
      481 rqailespek qltlneiynw ftrmfayfrr naatwknavr hnlslhkcfv rvenvkgavw
      541 tvdelefqkr rpqkisgnps likniqtsht yctplnaalq asmaensipl yttasmgnpt
      601 lgnlasamre elngamehtn sngsdsspgr spmqamhpvh vkeepldpde negplslvtt
      661 anhspdfdhd rdyedepvne die
//
LOCUS       XP_041316907             683 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041316907
VERSION     XP_041316907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460973.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..683
                     /product="forkhead box protein P1 isoform X1"
                     /calculated_mol_wt=76197
     Region          308..375
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          443..>632
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          470..551
                     /region_name="FH_FOXP2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P2 (FOXP2); cd20065"
                     /db_xref="CDD:410839"
     Site            order(475..482,484,486,490..494,498,500..502,504..505,
                     507..508,510,515..516,518..520,522..523,529,532,538..542,
                     544,547)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410839"
     Site            order(507,510,514,517,520..521,524,549..550)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410839"
     CDS             1..683
                     /gene="FOXP1"
                     /coded_by="XM_041460973.1:311..2362"
                     /db_xref="GeneID:121350019"
ORIGIN      
        1 mmqesgtetk sngsaiqnga sggnhllecs lrevrsnget psveigaadl ahlqqqqalq
       61 varqlllqqq qqqqqqqqqq qvsglkspkr ndkqpalqvp vsvammtpqv itpqqmqqil
      121 qqqvltpqql qvllqqqqal mlqqqqlqef ykkqqeqlql qllqqqhagk qpkepqqqqv
      181 atqqlafqqq llqmqqlqqq hllslqrqgl ltiqpgqptl plqplaqgmi ptelqqlwke
      241 vtsshtaeea asnnhssldl sttcvsssap sktsliinph astngqlsvh tpkreslshe
      301 ehshshplyg hgvckwpgce avcedfqsfl khlnsehald drstaqcrvq mqvvqqlelq
      361 lakdkerlqa mmthlhvkst epkatpqpln lvssvtlskt aseaspqslp htpttptapi
      421 tpvtqgpsvi tttsmhnvgp irrrysdkyn vpissadiaq nqefyknaev rppftyasli
      481 rqailespek qltlneiynw ftrmfayfrr naatwknavr hnlslhkcfv rvenvkgavw
      541 tvdelefqkr rpqkisgnps likniqtsht yctplnaalq asmaensipl yttasmgnpt
      601 lgnlasamre elngamehtn sngsdsspgr spmqamhpvh vkeepldpde negplslvtt
      661 anhspdfdhd rdyedepvne die
//
LOCUS       XP_041316916             682 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041316916
VERSION     XP_041316916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460982.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..682
                     /product="forkhead box protein P1 isoform X2"
                     /calculated_mol_wt=76126
     Region          308..375
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          443..>631
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          469..550
                     /region_name="FH_FOXP2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P2 (FOXP2); cd20065"
                     /db_xref="CDD:410839"
     Site            order(474..481,483,485,489..493,497,499..501,503..504,
                     506..507,509,514..515,517..519,521..522,528,531,537..541,
                     543,546)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410839"
     Site            order(506,509,513,516,519..520,523,548..549)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410839"
     CDS             1..682
                     /gene="FOXP1"
                     /coded_by="XM_041460982.1:783..2831"
                     /db_xref="GeneID:121350019"
ORIGIN      
        1 mmqesgtetk sngsaiqnga sggnhllecs lrevrsnget psveigaadl ahlqqqqalq
       61 varqlllqqq qqqqqqqqqq qvsglkspkr ndkqpalqvp vsvammtpqv itpqqmqqil
      121 qqqvltpqql qvllqqqqal mlqqqqlqef ykkqqeqlql qllqqqhagk qpkepqqqqv
      181 atqqlafqqq llqmqqlqqq hllslqrqgl ltiqpgqptl plqplaqgmi ptelqqlwke
      241 vtsshtaeea asnnhssldl sttcvsssap sktsliinph astngqlsvh tpkreslshe
      301 ehshshplyg hgvckwpgce avcedfqsfl khlnsehald drstaqcrvq mqvvqqlelq
      361 lakdkerlqa mmthlhvkst epkatpqpln lvssvtlskt aseaspqslp htpttptapi
      421 tpvtqgpsvi tttsmhnvgp irrrysdkyn vpissdiaqn qefyknaevr ppftyaslir
      481 qailespekq ltlneiynwf trmfayfrrn aatwknavrh nlslhkcfvr venvkgavwt
      541 vdelefqkrr pqkisgnpsl ikniqtshty ctplnaalqa smaensiply ttasmgnptl
      601 gnlasamree lngamehtns ngsdsspgrs pmqamhpvhv keepldpden egplslvtta
      661 nhspdfdhdr dyedepvned ie
//
LOCUS       XP_041316926             579 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041316926
VERSION     XP_041316926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041460992.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..579
                     /product="forkhead box protein P1 isoform X3"
                     /calculated_mol_wt=64945
     Region          204..271
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          339..>528
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          366..447
                     /region_name="FH_FOXP2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P2 (FOXP2); cd20065"
                     /db_xref="CDD:410839"
     Site            order(371..378,380,382,386..390,394,396..398,400..401,
                     403..404,406,411..412,414..416,418..419,425,428,434..438,
                     440,443)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410839"
     Site            order(403,406,410,413,416..417,420,445..446)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410839"
     CDS             1..579
                     /gene="FOXP1"
                     /coded_by="XM_041460992.1:65..1804"
                     /db_xref="GeneID:121350019"
ORIGIN      
        1 mmtpqvitpq qmqqilqqqv ltpqqlqvll qqqqalmlqq qqlqefykkq qeqlqlqllq
       61 qqhagkqpke pqqqqvatqq lafqqqllqm qqlqqqhlls lqrqglltiq pgqptlplqp
      121 laqgmiptel qqlwkevtss htaeeaasnn hssldlsttc vsssapskts liinphastn
      181 gqlsvhtpkr eslsheehsh shplyghgvc kwpgceavce dfqsflkhln sehalddrst
      241 aqcrvqmqvv qqlelqlakd kerlqammth lhvkstepka tpqplnlvss vtlsktasea
      301 spqslphtpt tptapitpvt qgpsvittts mhnvgpirrr ysdkynvpis sadiaqnqef
      361 yknaevrppf tyaslirqai lespekqltl neiynwftrm fayfrrnaat wknavrhnls
      421 lhkcfvrven vkgavwtvde lefqkrrpqk isgnpslikn iqtshtyctp lnaalqasma
      481 ensiplytta smgnptlgnl asamreelng amehtnsngs dsspgrspmq amhpvhvkee
      541 pldpdenegp lslvttanhs pdfdhdrdye depvnedie
//
LOCUS       XP_041316948             687 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316948
VERSION     XP_041316948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X1"
                     /calculated_mol_wt=76786
     Region          108..649
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(123,126,465,468..469)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(124..125,127..130,205,367..368,373,375,469,472..473)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(125,130,368,400)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(132..133,204,208,211,434,438)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..687
                     /gene="SLC6A6"
                     /coded_by="XM_041461014.1:84..2147"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 mlhlmlmglp gkentfsrds sslphpmees plpiyieegt evpiakkeli algisqiwtq
       61 kttesrnmat keklqclkdf hkdilkpspg kspgtrpede aegkppqrek waskidflls
      121 vaggfiglgn vwrfpylcyk ngggaflipy fiflfggglp vfflevvlgq ytseggitcw
      181 ekicpiftgi gyasivivsl lnvyyivila wglyylfqsf qsvlpwahch qkwntptcve
      241 dtlrknktlw islnatnfts pvtefwernv lslssgiedi giikwdlalc lllvwvicff
      301 ciwkgvkstg kvvyitatfp fimllvllir gvtlpgaaeg ikfylypdis rladpqvwid
      361 agtqiffsya iclgamtslg synkykyncy rdclllgcln sgtsfvsgfa ifsvlgfmaq
      421 eqgvniadva esgpglafia ypkavsmmpl ptfwailffi mllllgldsq fvevegqits
      481 lvdlhpsflr kgyrreifia ivcflsyllg ltmvteggmy vfqlfdyyaa sgvcllwvaf
      541 feciavawvy gadniydaie dmigyrpgpw mkwswivitp vlcvgcfifs lakykpltyn
      601 kvytypdwai glgwvlalss micipmvmvi riirsdgsli erikavaapk evnrwskete
      661 sgtpfcpngt sngglikpth iivetmm
//
LOCUS       XP_041316958             668 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316958
VERSION     XP_041316958.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461024.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..668
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X2"
                     /calculated_mol_wt=74674
     Region          89..630
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(104,107,446,449..450)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(105..106,108..111,186,348..349,354,356,450,453..454)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(106,111,349,381)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(113..114,185,189,192,415,419)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..668
                     /gene="SLC6A6"
                     /coded_by="XM_041461024.1:85..2091"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 mlhlmlmglp gkentfsrds sslphpmees plpiyieegt evpiesrnma tkeklqclkd
       61 fhkdilkpsp gkspgtrped eaegkppqre kwaskidfll svaggfiglg nvwrfpylcy
      121 kngggaflip yfiflfgggl pvfflevvlg qytseggitc wekicpiftg igyasivivs
      181 llnvyyivil awglyylfqs fqsvlpwahc hqkwntptcv edtlrknktl wislnatnft
      241 spvtefwern vlslssgied igiikwdlal clllvwvicf fciwkgvkst gkvvyitatf
      301 pfimllvlli rgvtlpgaae gikfylypdi srladpqvwi dagtqiffsy aiclgamtsl
      361 gsynkykync yrdclllgcl nsgtsfvsgf aifsvlgfma qeqgvniadv aesgpglafi
      421 aypkavsmmp lptfwailff imllllglds qfvevegqit slvdlhpsfl rkgyrreifi
      481 aivcflsyll gltmvteggm yvfqlfdyya asgvcllwva ffeciavawv ygadniydai
      541 edmigyrpgp wmkwswivit pvlcvgcfif slakykplty nkvytypdwa iglgwvlals
      601 smicipmvmv iriirsdgsl ierikavaap kevnrwsket esgtpfcpng tsngglikpt
      661 hiivetmm
//
LOCUS       XP_041316968             661 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316968
VERSION     XP_041316968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461034.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..661
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X3"
                     /calculated_mol_wt=73907
     Region          82..623
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(97,100,439,442..443)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(98..99,101..104,179,341..342,347,349,443,446..447)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(99,104,342,374)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(106..107,178,182,185,408,412)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..661
                     /gene="SLC6A6"
                     /coded_by="XM_041461034.1:182..2167"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 meesplpiyi eegtevpiak kelialgisq iwtqkttesr nmatkeklqc lkdfhkdilk
       61 pspgkspgtr pedeaegkpp qrekwaskid fllsvaggfi glgnvwrfpy lcykngggaf
      121 lipyfiflfg gglpvfflev vlgqytsegg itcwekicpi ftgigyasiv ivsllnvyyi
      181 vilawglyyl fqsfqsvlpw ahchqkwntp tcvedtlrkn ktlwislnat nftspvtefw
      241 ernvlslssg iedigiikwd lalclllvwv icffciwkgv kstgkvvyit atfpfimllv
      301 llirgvtlpg aaegikfyly pdisrladpq vwidagtqif fsyaiclgam tslgsynkyk
      361 yncyrdclll gclnsgtsfv sgfaifsvlg fmaqeqgvni advaesgpgl afiaypkavs
      421 mmplptfwai lffimllllg ldsqfveveg qitslvdlhp sflrkgyrre ifiaivcfls
      481 yllgltmvte ggmyvfqlfd yyaasgvcll wvaffeciav awvygadniy daiedmigyr
      541 pgpwmkwswi vitpvlcvgc fifslakykp ltynkvytyp dwaiglgwvl alssmicipm
      601 vmviriirsd gslierikav aapkevnrws ketesgtpfc pngtsnggli kpthiivetm
      661 m
//
LOCUS       XP_041316976             661 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316976
VERSION     XP_041316976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..661
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X3"
                     /calculated_mol_wt=73907
     Region          82..623
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(97,100,439,442..443)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(98..99,101..104,179,341..342,347,349,443,446..447)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(99,104,342,374)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(106..107,178,182,185,408,412)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..661
                     /gene="SLC6A6"
                     /coded_by="XM_041461042.1:160..2145"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 meesplpiyi eegtevpiak kelialgisq iwtqkttesr nmatkeklqc lkdfhkdilk
       61 pspgkspgtr pedeaegkpp qrekwaskid fllsvaggfi glgnvwrfpy lcykngggaf
      121 lipyfiflfg gglpvfflev vlgqytsegg itcwekicpi ftgigyasiv ivsllnvyyi
      181 vilawglyyl fqsfqsvlpw ahchqkwntp tcvedtlrkn ktlwislnat nftspvtefw
      241 ernvlslssg iedigiikwd lalclllvwv icffciwkgv kstgkvvyit atfpfimllv
      301 llirgvtlpg aaegikfyly pdisrladpq vwidagtqif fsyaiclgam tslgsynkyk
      361 yncyrdclll gclnsgtsfv sgfaifsvlg fmaqeqgvni advaesgpgl afiaypkavs
      421 mmplptfwai lffimllllg ldsqfveveg qitslvdlhp sflrkgyrre ifiaivcfls
      481 yllgltmvte ggmyvfqlfd yyaasgvcll wvaffeciav awvygadniy daiedmigyr
      541 pgpwmkwswi vitpvlcvgc fifslakykp ltynkvytyp dwaiglgwvl alssmicipm
      601 vmviriirsd gslierikav aapkevnrws ketesgtpfc pngtsnggli kpthiivetm
      661 m
//
LOCUS       XP_041316986             642 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316986
VERSION     XP_041316986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X4"
                     /calculated_mol_wt=71796
     Region          63..604
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(78,81,420,423..424)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(79..80,82..85,160,322..323,328,330,424,427..428)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(80,85,323,355)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(87..88,159,163,166,389,393)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..642
                     /gene="SLC6A6"
                     /coded_by="XM_041461052.1:182..2110"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 meesplpiyi eegtevpies rnmatkeklq clkdfhkdil kpspgkspgt rpedeaegkp
       61 pqrekwaski dfllsvaggf iglgnvwrfp ylcyknggga flipyfiflf ggglpvffle
      121 vvlgqytseg gitcwekicp iftgigyasi vivsllnvyy ivilawglyy lfqsfqsvlp
      181 wahchqkwnt ptcvedtlrk nktlwislna tnftspvtef wernvlslss giedigiikw
      241 dlalclllvw vicffciwkg vkstgkvvyi tatfpfimll vllirgvtlp gaaegikfyl
      301 ypdisrladp qvwidagtqi ffsyaiclga mtslgsynky kyncyrdcll lgclnsgtsf
      361 vsgfaifsvl gfmaqeqgvn iadvaesgpg lafiaypkav smmplptfwa ilffimllll
      421 gldsqfveve gqitslvdlh psflrkgyrr eifiaivcfl syllgltmvt eggmyvfqlf
      481 dyyaasgvcl lwvaffecia vawvygadni ydaiedmigy rpgpwmkwsw ivitpvlcvg
      541 cfifslakyk pltynkvyty pdwaiglgwv lalssmicip mvmviriirs dgslierika
      601 vaapkevnrw sketesgtpf cpngtsnggl ikpthiivet mm
//
LOCUS       XP_041316995             620 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041316995
VERSION     XP_041316995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..620
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X5"
                     /calculated_mol_wt=69281
     Region          41..582
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(56,59,398,401..402)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(57..58,60..63,138,300..301,306,308,402,405..406)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(58,63,301,333)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(65..66,137,141,144,367,371)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..620
                     /gene="SLC6A6"
                     /coded_by="XM_041461061.1:239..2101"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 matkeklqcl kdfhkdilkp spgkspgtrp edeaegkppq rekwaskidf llsvaggfig
       61 lgnvwrfpyl cykngggafl ipyfiflfgg glpvfflevv lgqytseggi tcwekicpif
      121 tgigyasivi vsllnvyyiv ilawglyylf qsfqsvlpwa hchqkwntpt cvedtlrknk
      181 tlwislnatn ftspvtefwe rnvlslssgi edigiikwdl alclllvwvi cffciwkgvk
      241 stgkvvyita tfpfimllvl lirgvtlpga aegikfylyp disrladpqv widagtqiff
      301 syaiclgamt slgsynkyky ncyrdclllg clnsgtsfvs gfaifsvlgf maqeqgvnia
      361 dvaesgpgla fiaypkavsm mplptfwail ffimllllgl dsqfvevegq itslvdlhps
      421 flrkgyrrei fiaivcflsy llgltmvteg gmyvfqlfdy yaasgvcllw vaffeciava
      481 wvygadniyd aiedmigyrp gpwmkwswiv itpvlcvgcf ifslakykpl tynkvytypd
      541 waiglgwvla lssmicipmv mviriirsdg slierikava apkevnrwsk etesgtpfcp
      601 ngtsngglik pthiivetmm
//
LOCUS       XP_041317003             620 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317003
VERSION     XP_041317003.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461069.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..620
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X5"
                     /calculated_mol_wt=69281
     Region          41..582
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(56,59,398,401..402)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(57..58,60..63,138,300..301,306,308,402,405..406)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(58,63,301,333)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(65..66,137,141,144,367,371)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..620
                     /gene="SLC6A6"
                     /coded_by="XM_041461069.1:182..2044"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 matkeklqcl kdfhkdilkp spgkspgtrp edeaegkppq rekwaskidf llsvaggfig
       61 lgnvwrfpyl cykngggafl ipyfiflfgg glpvfflevv lgqytseggi tcwekicpif
      121 tgigyasivi vsllnvyyiv ilawglyylf qsfqsvlpwa hchqkwntpt cvedtlrknk
      181 tlwislnatn ftspvtefwe rnvlslssgi edigiikwdl alclllvwvi cffciwkgvk
      241 stgkvvyita tfpfimllvl lirgvtlpga aegikfylyp disrladpqv widagtqiff
      301 syaiclgamt slgsynkyky ncyrdclllg clnsgtsfvs gfaifsvlgf maqeqgvnia
      361 dvaesgpgla fiaypkavsm mplptfwail ffimllllgl dsqfvevegq itslvdlhps
      421 flrkgyrrei fiaivcflsy llgltmvteg gmyvfqlfdy yaasgvcllw vaffeciava
      481 wvygadniyd aiedmigyrp gpwmkwswiv itpvlcvgcf ifslakykpl tynkvytypd
      541 waiglgwvla lssmicipmv mviriirsdg slierikava apkevnrwsk etesgtpfcp
      601 ngtsngglik pthiivetmm
//
LOCUS       XP_041317012             620 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317012
VERSION     XP_041317012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..620
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X5"
                     /calculated_mol_wt=69281
     Region          41..582
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(56,59,398,401..402)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(57..58,60..63,138,300..301,306,308,402,405..406)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(58,63,301,333)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(65..66,137,141,144,367,371)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..620
                     /gene="SLC6A6"
                     /coded_by="XM_041461078.1:353..2215"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 matkeklqcl kdfhkdilkp spgkspgtrp edeaegkppq rekwaskidf llsvaggfig
       61 lgnvwrfpyl cykngggafl ipyfiflfgg glpvfflevv lgqytseggi tcwekicpif
      121 tgigyasivi vsllnvyyiv ilawglyylf qsfqsvlpwa hchqkwntpt cvedtlrknk
      181 tlwislnatn ftspvtefwe rnvlslssgi edigiikwdl alclllvwvi cffciwkgvk
      241 stgkvvyita tfpfimllvl lirgvtlpga aegikfylyp disrladpqv widagtqiff
      301 syaiclgamt slgsynkyky ncyrdclllg clnsgtsfvs gfaifsvlgf maqeqgvnia
      361 dvaesgpgla fiaypkavsm mplptfwail ffimllllgl dsqfvevegq itslvdlhps
      421 flrkgyrrei fiaivcflsy llgltmvteg gmyvfqlfdy yaasgvcllw vaffeciava
      481 wvygadniyd aiedmigyrp gpwmkwswiv itpvlcvgcf ifslakykpl tynkvytypd
      541 waiglgwvla lssmicipmv mviriirsdg slierikava apkevnrwsk etesgtpfcp
      601 ngtsngglik pthiivetmm
//
LOCUS       XP_041317023             620 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent taurine transporter isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317023
VERSION     XP_041317023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..620
                     /product="sodium- and chloride-dependent taurine
                     transporter isoform X5"
                     /calculated_mol_wt=69281
     Region          41..582
                     /region_name="SLC6sbd_TauT"
                     /note="Na(+)- and Cl(-)-dependent taurine transporter;
                     solute-binding domain; cd11510"
                     /db_xref="CDD:271398"
     Site            order(56,59,398,401..402)
                     /site_type="other"
                     /note="Na binding site 2 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(57..58,60..63,138,300..301,306,308,402,405..406)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     Site            order(58,63,301,333)
                     /site_type="other"
                     /note="Na binding site 1 [ion binding]"
                     /db_xref="CDD:271398"
     Site            order(65..66,137,141,144,367,371)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:271398"
     CDS             1..620
                     /gene="SLC6A6"
                     /coded_by="XM_041461089.1:131..1993"
                     /db_xref="GeneID:121350039"
ORIGIN      
        1 matkeklqcl kdfhkdilkp spgkspgtrp edeaegkppq rekwaskidf llsvaggfig
       61 lgnvwrfpyl cykngggafl ipyfiflfgg glpvfflevv lgqytseggi tcwekicpif
      121 tgigyasivi vsllnvyyiv ilawglyylf qsfqsvlpwa hchqkwntpt cvedtlrknk
      181 tlwislnatn ftspvtefwe rnvlslssgi edigiikwdl alclllvwvi cffciwkgvk
      241 stgkvvyita tfpfimllvl lirgvtlpga aegikfylyp disrladpqv widagtqiff
      301 syaiclgamt slgsynkyky ncyrdclllg clnsgtsfvs gfaifsvlgf maqeqgvnia
      361 dvaesgpgla fiaypkavsm mplptfwail ffimllllgl dsqfvevegq itslvdlhps
      421 flrkgyrrei fiaivcflsy llgltmvteg gmyvfqlfdy yaasgvcllw vaffeciava
      481 wvygadniyd aiedmigyrp gpwmkwswiv itpvlcvgcf ifslakykpl tynkvytypd
      541 waiglgwvla lssmicipmv mviriirsdg slierikava apkevnrwsk etesgtpfcp
      601 ngtsngglik pthiivetmm
//
LOCUS       XP_041317037             284 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-like protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317037
VERSION     XP_041317037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="formin-like protein 3 isoform X1"
                     /calculated_mol_wt=30809
     Region          <107..151
                     /region_name="PDDEXK_nuclease-like"
                     /note="PDDEXK family nucleases; cl40440"
                     /db_xref="CDD:477358"
     CDS             1..284
                     /gene="LOC121350072"
                     /coded_by="XM_041461103.1:33..887"
                     /db_xref="GeneID:121350072"
ORIGIN      
        1 meggkgkrar ghpesrrtkg grcrrhrpgs vrlrwarscr pfvrrgsegr sapapppppp
       61 ppapapqrqr rqqrqphrpp alppgrcryl cplaavparr capaavrrvr rsgaarlaap
      121 srrkrvpssq kkhptalspr lpvpapgpwl cssapaflpg ptgdwslepv plyqpgfgdr
      181 fvpgavccwr rqhgsavwqv pgrlghlcsa lpppkravpd tgksrsqren kvrpgrsavk
      241 msgavfcfas gftepkagpl plqanghmtq tcpssptcip rffk
//
LOCUS       XP_041317045             271 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-like protein 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041317045
VERSION     XP_041317045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="formin-like protein 3 isoform X2"
                     /calculated_mol_wt=29611
     CDS             1..271
                     /gene="LOC121350072"
                     /coded_by="XM_041461111.1:33..848"
                     /db_xref="GeneID:121350072"
ORIGIN      
        1 meggkgkrar ghpesrrtkg grcrrhrpgs vrlrwarscr pfvrrgsegr sapapppppp
       61 ppapapqrqr rqqrqphrpp alppgrcryl cplaavparr capaavrrvr rsgaarlaap
      121 srrkrvpssq kkhptalspr lpvpapgpwl cssapaflpg ptgdwslepv plyqpgfgdr
      181 fvpgavccwr rqhgsavwqv pgrlghlcsa lpppkravpd tgksrsqren kekpcfhcla
      241 argnmmfhgl rtkmghgqrg dfagigkilq v
//
LOCUS       XP_041317070             861 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin monoglycylase TTLL3-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317070
VERSION     XP_041317070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..861
                     /product="tubulin monoglycylase TTLL3-like isoform X1"
                     /calculated_mol_wt=97093
     Region          278..564
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <617..841
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..861
                     /gene="LOC121350098"
                     /coded_by="XM_041461136.1:825..3410"
                     /db_xref="GeneID:121350098"
ORIGIN      
        1 mppaciycis gsgelsqknq dwgrlsplvs aqekkifmvq gpypiirhll rargwverkv
       61 prsgrqleqh csdqnkqrlq tgpgdgrgrq revllhprgg aqpflgtpdp lhypwlpaek
      121 eeeqcdedpn gihdlmsyla rdqlpnfvwt nfleatdrql lqedimlnhy aqvdafttke
      181 glclslqnlp wieqadpntf fprcyrlatt ddreafiedf rltaarsllk laleeagdrp
      241 vrteqvpnsa rgearsgspl ypelveeale vckqhlgvlh hedidrntps pcrtcidwdh
      301 flqqyyhvah egaglvltrq qrkecqnllh slaeklpqld megklnvwil kpgaesqgrg
      361 iicmtrleem lqlawsctap svqvgrwvvq kyverlltif gtkfdirqwf vvtdwkpltv
      421 wfyqdcylrf csrpfslhhl erarhlcnvs vqkwyetspd qdprvppdki wsnkqfqeyl
      481 aqlgqadawh kvlvpgmkaa ilnalrsaqd rvrfrkgnfe lygadfvvge dcqpwllein
      541 scptmspssa vtrrlcanvq rdtlclvldr kdnptcsiga feliykeaav pktlsarvkl
      601 mvkgcslknl qsaqeeaqdk ppipvanslh dpvspeprat hvakrawdqf ptmvpsafks
      661 svsprgrttq vprrsrhrsp amvpsafkss vsprgrttqg tqpraaakkl ppleqqshcp
      721 strsdppapp kprgssagrq glprlshlpq itgcpldwvp mppprgtprn pwlapgcars
      781 fppaktlqqp lsaqstrtsr lehkdtaapn grqktwdtet rpgvdsslpv laeptlaasd
      841 pkelsllcrg tqllprfnii l
//
LOCUS       XP_041317078             854 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin monoglycylase TTLL3-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317078
VERSION     XP_041317078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..854
                     /product="tubulin monoglycylase TTLL3-like isoform X2"
                     /calculated_mol_wt=96331
     Region          271..557
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <610..834
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..854
                     /gene="LOC121350098"
                     /coded_by="XM_041461144.1:825..3389"
                     /db_xref="GeneID:121350098"
ORIGIN      
        1 mppaciycis gsgelsqknq dwgrlsplvs aqekkifmvq gpypiirhll rargwverkv
       61 prsgrqleqh csdqnkqrlq tgpgdgrgrq revllhprgg aqpflgtpdp lhypwlpaek
      121 eeeqcdedpn gihdlmsyla rdqlpnfvwt nfleatdrql lqedimlnhy aqeglclslq
      181 nlpwieqadp ntffprcyrl attddreafi edfrltaars llklaleeag drpvrteqvp
      241 nsargearsg splypelvee alevckqhlg vlhhedidrn tpspcrtcid wdhflqqyyh
      301 vahegaglvl trqqrkecqn llhslaeklp qldmegklnv wilkpgaesq grgiicmtrl
      361 eemlqlawsc tapsvqvgrw vvqkyverll tifgtkfdir qwfvvtdwkp ltvwfyqdcy
      421 lrfcsrpfsl hhlerarhlc nvsvqkwyet spdqdprvpp dkiwsnkqfq eylaqlgqad
      481 awhkvlvpgm kaailnalrs aqdrvrfrkg nfelygadfv vgedcqpwll einscptmsp
      541 ssavtrrlca nvqrdtlclv ldrkdnptcs igafeliyke aavpktlsar vklmvkgcsl
      601 knlqsaqeea qdkppipvan slhdpvspep rathvakraw dqfptmvpsa fkssvsprgr
      661 ttqvprrsrh rspamvpsaf kssvsprgrt tqgtqpraaa kklppleqqs hcpstrsdpp
      721 appkprgssa grqglprlsh lpqitgcpld wvpmppprgt prnpwlapgc arsfppaktl
      781 qqplsaqstr tsrlehkdta apngrqktwd tetrpgvdss lpvlaeptla asdpkelsll
      841 crgtqllprf niil
//
LOCUS       XP_041317086             833 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin monoglycylase TTLL3-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317086
VERSION     XP_041317086.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461152.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..833
                     /product="tubulin monoglycylase TTLL3-like isoform X3"
                     /calculated_mol_wt=94118
     Region          250..536
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     Region          <589..813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..833
                     /gene="LOC121350098"
                     /coded_by="XM_041461152.1:785..3286"
                     /db_xref="GeneID:121350098"
ORIGIN      
        1 maikekkifm vqgpypiirh llrargwver kvprsgrqle qhcsdqnkqr lqtgpgdgrg
       61 rqrevllhpr ggaqpflgtp dplhypwlpa ekeeeqcded pngihdlmsy lardqlpnfv
      121 wtnfleatdr qllqedimln hyaqvdaftt keglclslqn lpwieqadpn tffprcyrla
      181 ttddreafie dfrltaarsl lklaleeagd rpvrteqvpn sargearsgs plypelveea
      241 levckqhlgv lhhedidrnt pspcrtcidw dhflqqyyhv ahegaglvlt rqqrkecqnl
      301 lhslaeklpq ldmegklnvw ilkpgaesqg rgiicmtrle emlqlawsct apsvqvgrwv
      361 vqkyverllt ifgtkfdirq wfvvtdwkpl tvwfyqdcyl rfcsrpfslh hlerarhlcn
      421 vsvqkwyets pdqdprvppd kiwsnkqfqe ylaqlgqada whkvlvpgmk aailnalrsa
      481 qdrvrfrkgn felygadfvv gedcqpwlle inscptmsps savtrrlcan vqrdtlclvl
      541 drkdnptcsi gafeliykea avpktlsarv klmvkgcslk nlqsaqeeaq dkppipvans
      601 lhdpvspepr athvakrawd qfptmvpsaf kssvsprgrt tqvprrsrhr spamvpsafk
      661 ssvsprgrtt qgtqpraaak klppleqqsh cpstrsdppa ppkprgssag rqglprlshl
      721 pqitgcpldw vpmppprgtp rnpwlapgca rsfppaktlq qplsaqstrt srlehkdtaa
      781 pngrqktwdt etrpgvdssl pvlaeptlaa sdpkelsllc rgtqllprfn iil
//
LOCUS       XP_041317097             772 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-17 receptor E isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317097
VERSION     XP_041317097.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461163.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="interleukin-17 receptor E isoform X1"
                     /calculated_mol_wt=83744
     Region          <5..184
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <216..535
                     /region_name="IL17_R_N"
                     /note="Interleukin-17 receptor extracellular region;
                     pfam15037"
                     /db_xref="CDD:464460"
     Region          576..729
                     /region_name="SEFIR"
                     /note="SEFIR domain; pfam08357"
                     /db_xref="CDD:254756"
     CDS             1..772
                     /gene="IL17RE"
                     /coded_by="XM_041461163.1:215..2533"
                     /db_xref="GeneID:121350123"
ORIGIN      
        1 mvghplpaat gsrrmggrga pgfrapgspl prtpdpqnfl apgaprfqrl lipgspcfra
       61 lpnpkdsrfr glriteapgl sglwmpgapp frlhlpgtpr gsppskhsqs pglllpagpp
      121 ahgrpvcspp aadrtlsrpr crrasrpgpp leppalslsr arlclpaqpc qpclrvrlal
      181 paseldgvrg lqlsflelgs nragwlhvwq rrrvlgssaw qvqfdcfpae sgrrvlvslr
      241 tipdrglals cshmvtaepp gpvfthawvp evraievwvp agpallvrlc hqlaleceel
      301 prpfhqqvlv pgghhislpy eflvpclcie asyshhdspr skhcpfhdrp daygselwss
      361 vrfhdystss kdqmvmvlsg scplhpratl cwreaadeaa pchdipnsta sedeqmyvld
      421 kvdvhpqlcf rfsyknsshv ecphhpetaw nvsvsvwglq lhlhltsrip aafsaalcqr
      481 rggqcepeap lytvtqpegs apgelalllp vqvlgscvlv wrsdvhfark qllcpdvshr
      541 hfgllglvla lglvvivlll ncrgawrpnd gvpgrrpvll lyspdseehl glvcalaerl
      601 rsglgcdvrl dlweagglgq agalpwlyaq rghvgrqrgt vlllwsrgsa rlfhrwqvgm
      661 adgtpgdahd ifgaamaclh gelgaagrgg gwvlayfsrl cspcdvprpl rplptyrlpr
      721 qlpgllgalr gsppaprrcr wgraggllhr llevgaregs pppqppgaas gt
//
LOCUS       XP_041317106             708 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-17 receptor E isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041317106
VERSION     XP_041317106.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461172.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="interleukin-17 receptor E isoform X2"
                     /calculated_mol_wt=77316
     Region          <127..446
                     /region_name="IL17_R_N"
                     /note="Interleukin-17 receptor extracellular region;
                     pfam15037"
                     /db_xref="CDD:464460"
     Region          512..665
                     /region_name="SEFIR"
                     /note="SEFIR domain; pfam08357"
                     /db_xref="CDD:254756"
     CDS             1..708
                     /gene="IL17RE"
                     /coded_by="XM_041461172.1:35..2161"
                     /db_xref="GeneID:121350123"
ORIGIN      
        1 merpvllaaa aallllllll psgtgaavtr lrvsanfecr atadrtlsrp rcrrasrpgp
       61 pleppalsls rarlclpaqp cqpclrvrla lpaseldgvr glqlsflelg snragwlhvw
      121 qrrrvlgssa wqvqfdcfpa esgrrvlvsl rtipdrglal scshmvtaep pgpvfthawv
      181 pevraievwv pagpallvrl chqlalecee lprpfhqqvl vpgghhislp yeflvpclci
      241 easyshhdsp rskhcpfhdr pdaygselws svrfhdysts skdqmvmvls gscplhprat
      301 lcwreaadea apchdipnst asedeqmyvl dkvdvhpqlc frfsyknssh vecphhpeta
      361 wnvsvsvwgl qlhlhltsri paafsaalcq rrggqcepea plytvtqpeg sapgelalll
      421 pvqvlgscvl vwrsdvhfar kqllcpdger gswrglrgqw kwadspftap lpvshrhfgl
      481 lglvlalglv vivlllncrg awrpndgvpg rrpvlllysp dseehlglvc alaerlrsgl
      541 gcdvrldlwe agglgqagal pwlyaqrghv grqrgtvlll wsrgsarlfh rwqvgmadgt
      601 pgdahdifga amaclhgelg aagrgggwvl ayfsrlcspc dvprplrplp tyrlprqlpg
      661 llgalrgspp aprrcrwgra ggllhrllev garegspppq ppgaasgt
//
LOCUS       XP_041317114             631 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-17 receptor E isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041317114
VERSION     XP_041317114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="interleukin-17 receptor E isoform X3"
                     /calculated_mol_wt=68823
     Region          <75..394
                     /region_name="IL17_R_N"
                     /note="Interleukin-17 receptor extracellular region;
                     pfam15037"
                     /db_xref="CDD:464460"
     Region          435..588
                     /region_name="SEFIR"
                     /note="SEFIR domain; pfam08357"
                     /db_xref="CDD:254756"
     CDS             1..631
                     /gene="IL17RE"
                     /coded_by="XM_041461180.1:34..1929"
                     /db_xref="GeneID:121350123"
ORIGIN      
        1 merpvllaaa aallllllll psgtgaavtr lrvsanfecr ateldgvrgl qlsflelgsn
       61 ragwlhvwqr rrvlgssawq vqfdcfpaes grrvlvslrt ipdrglalsc shmvtaeppg
      121 pvfthawvpe vraievwvpa gpallvrlch qlaleceelp rpfhqqvlvp gghhislpye
      181 flvpclciea syshhdsprs khcpfhdrpd aygselwssv rfhdystssk dqmvmvlsgs
      241 cplhpratlc wreaadeaap chdipnstas edeqmyvldk vdvhpqlcfr fsyknsshve
      301 cphhpetawn vsvsvwglql hlhltsripa afsaalcqrr ggqcepeapl ytvtqpegsa
      361 pgelalllpv qvlgscvlvw rsdvhfarkq llcpdvshrh fgllglvlal glvvivllln
      421 crgawrpndg vpgrrpvlll yspdseehlg lvcalaerlr sglgcdvrld lweagglgqa
      481 galpwlyaqr ghvgrqrgtv lllwsrgsar lfhrwqvgma dgtpgdahdi fgaamaclhg
      541 elgaagrggg wvlayfsrlc spcdvprplr plptyrlprq lpgllgalrg sppaprrcrw
      601 graggllhrl levgaregsp ppqppgaasg t
//
LOCUS       XP_041317124             683 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-17 receptor E isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041317124
VERSION     XP_041317124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..683
                     /product="interleukin-17 receptor E isoform X4"
                     /calculated_mol_wt=74477
     Region          <127..446
                     /region_name="IL17_R_N"
                     /note="Interleukin-17 receptor extracellular region;
                     pfam15037"
                     /db_xref="CDD:464460"
     Region          487..640
                     /region_name="SEFIR"
                     /note="SEFIR domain; pfam08357"
                     /db_xref="CDD:254756"
     CDS             1..683
                     /gene="IL17RE"
                     /coded_by="XM_041461190.1:35..2086"
                     /db_xref="GeneID:121350123"
ORIGIN      
        1 merpvllaaa aallllllll psgtgaavtr lrvsanfecr atadrtlsrp rcrrasrpgp
       61 pleppalsls rarlclpaqp cqpclrvrla lpaseldgvr glqlsflelg snragwlhvw
      121 qrrrvlgssa wqvqfdcfpa esgrrvlvsl rtipdrglal scshmvtaep pgpvfthawv
      181 pevraievwv pagpallvrl chqlalecee lprpfhqqvl vpgghhislp yeflvpclci
      241 easyshhdsp rskhcpfhdr pdaygselws svrfhdysts skdqmvmvls gscplhprat
      301 lcwreaadea apchdipnst asedeqmyvl dkvdvhpqlc frfsyknssh vecphhpeta
      361 wnvsvsvwgl qlhlhltsri paafsaalcq rrggqcepea plytvtqpeg sapgelalll
      421 pvqvlgscvl vwrsdvhfar kqllcpdvsh rhfgllglvl alglvvivll lncrgawrpn
      481 dgvpgrrpvl llyspdseeh lglvcalaer lrsglgcdvr ldlweagglg qagalpwlya
      541 qrghvgrqrg tvlllwsrgs arlfhrwqvg madgtpgdah difgaamacl hgelgaagrg
      601 ggwvlayfsr lcspcdvprp lrplptyrlp rqlpgllgal rgsppaprrc rwgraggllh
      661 rllevgareg spppqppgaa sgt
//
LOCUS       XP_041317136             168 aa            linear   VRT 06-MAY-2021
DEFINITION  actin-related protein 2/3 complex subunit 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317136
VERSION     XP_041317136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="actin-related protein 2/3 complex subunit 4"
                     /calculated_mol_wt=19575
     Region          1..166
                     /region_name="ARPC4"
                     /note="ARP2/3 complex 20 kDa subunit (ARPC4); pfam05856"
                     /db_xref="CDD:461760"
     CDS             1..168
                     /gene="ARPC4"
                     /coded_by="XM_041461202.1:155..661"
                     /db_xref="GeneID:121350142"
ORIGIN      
        1 mtatlrpyln avratlqaal clenfssqvv erhnkpevev rsskelllqp viisrnekek
       61 vliegsinsv rvsiavkqad eiekilchkf mrfmmmraen ffilrrkpve gydisflitn
      121 fhteqmykhk lvdfvihfme eidkeisemk lsvnarariv aeeflknf
//
LOCUS       XP_041317150             297 aa            linear   VRT 06-MAY-2021
DEFINITION  store-operated calcium entry regulator STIMATE-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317150
VERSION     XP_041317150.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461216.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..297
                     /product="store-operated calcium entry regulator
                     STIMATE-like"
                     /calculated_mol_wt=33471
     Region          103..222
                     /region_name="STIMATE"
                     /note="STIMATE family; pfam12400"
                     /db_xref="CDD:463561"
     CDS             1..297
                     /gene="LOC121350149"
                     /coded_by="XM_041461216.1:43..936"
                     /db_xref="GeneID:121350149"
ORIGIN      
        1 mgapppngsl gltagtprpa gapgpgdrgc engalmdrfg iflqgllgvv afstlmlkrf
       61 repkherrpw riwfldtskq aigmlfihfa nvylsdltee dpcslylinf lldatlgmll
      121 iyigiravss ivewqqwesl rfgeygdplq csawvgqcal yimimtfekt iiiivllipq
      181 wkevallnpi enpqlelaiv mlivpffvna lmfwvvdnfl mkkgktkakl eekeagqdsr
      241 ngskvryrra asheesesei lisaddemee sdaeedlrrl tnlkpikkkk hrfglpv
//
LOCUS       XP_041317159             297 aa            linear   VRT 06-MAY-2021
DEFINITION  store-operated calcium entry regulator STIMATE-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317159
VERSION     XP_041317159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..297
                     /product="store-operated calcium entry regulator
                     STIMATE-like"
                     /calculated_mol_wt=33471
     Region          103..222
                     /region_name="STIMATE"
                     /note="STIMATE family; pfam12400"
                     /db_xref="CDD:463561"
     CDS             1..297
                     /gene="LOC121350149"
                     /coded_by="XM_041461225.1:43..936"
                     /db_xref="GeneID:121350149"
ORIGIN      
        1 mgapppngsl gltagtprpa gapgpgdrgc engalmdrfg iflqgllgvv afstlmlkrf
       61 repkherrpw riwfldtskq aigmlfihfa nvylsdltee dpcslylinf lldatlgmll
      121 iyigiravss ivewqqwesl rfgeygdplq csawvgqcal yimimtfekt iiiivllipq
      181 wkevallnpi enpqlelaiv mlivpffvna lmfwvvdnfl mkkgktkakl eekeagqdsr
      241 ngskvryrra asheesesei lisaddemee sdaeedlrrl tnlkpikkkk hrfglpv
//
LOCUS       XP_041317172              78 aa            linear   VRT 06-MAY-2021
DEFINITION  musculoskeletal embryonic nuclear protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317172
VERSION     XP_041317172.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461238.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..78
                     /product="musculoskeletal embryonic nuclear protein 1"
                     /calculated_mol_wt=8363
     Region          4..78
                     /region_name="Mustang"
                     /note="Musculoskeletal, temporally activated-embryonic
                     nuclear protein 1; pfam15682"
                     /db_xref="CDD:464800"
     CDS             1..78
                     /gene="MUSTN1"
                     /coded_by="XM_041461238.1:127..363"
                     /db_xref="GeneID:121350158"
ORIGIN      
        1 msqpapvkkk rppvkeedlk gargnlaknq eiksktyqvm rqceqmgsaa psvfsgartg
       61 getvfekpkd epaksvfg
//
LOCUS       XP_041317185            2187 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent L-type calcium channel subunit alpha-1D
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317185
VERSION     XP_041317185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2187
                     /product="voltage-dependent L-type calcium channel subunit
                     alpha-1D"
                     /calculated_mol_wt=249005
     Region          118..410
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          544..779
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          904..1181
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1226..1502
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1511..1564
                     /region_name="GPHH"
                     /note="Voltage-dependent L-type calcium channel,
                     IQ-associated; pfam16905"
                     /db_xref="CDD:465306"
     Region          1574..1648
                     /region_name="Ca_chan_IQ"
                     /note="Voltage gated calcium channel IQ domain; pfam08763"
                     /db_xref="CDD:462591"
     Region          <1948..2186
                     /region_name="CAC1F_C"
                     /note="Voltage-gated calcium channel subunit alpha,
                     C-term; pfam16885"
                     /db_xref="CDD:465298"
     CDS             1..2187
                     /gene="CACNA1D"
                     /coded_by="XM_041461251.1:349..6912"
                     /db_xref="GeneID:121350165"
ORIGIN      
        1 mhqqpqpeqh peevnyasst riplpgdgpa iqsnssapsk qtvlswqaai daarqakaaq
       61 nmstttaqpv gslsqrkrqq yakskkqgnt snsrppralf clslnnpirr acislvewkp
      121 fdifillsif ancvalavyi pfpeddsnst nhnlekveya fliiftvetf lkiiayglll
      181 hpnayvrngw nlldfviviv glfsvileql tketdggshs ggkpggfdvk alrafrvlrp
      241 lrlvsgvpsl qvvlnsiika mvpllhiall vlfviiiyai iglelfigkm hkscflidsd
      301 ilveddpapc afsgngrqcv mngteckggw vgpnggitnf dnfafamltv fqcitmegwt
      361 dvlywvndai gcewpwiyfv sliilgsffv lnlvlgvlsg efskerekak argdfqklre
      421 kqqleedlkg yldwitqaed idpendeead eegkrnrltl adlmedkkks rlscfgrssn
      481 khasmptset esvntenvsg egespaccgs lcqtiskskf srrwrrwnrf nrrkcraavk
      541 svtfywlviv lvflntltis sehynqpdwl tqiqdiankv llalftceml vkmyslglqa
      601 yfvslfnrfd cfvvcggive tilveleims plgisvfrcv rllrifkvtr hwaslsnlva
      661 sllnsmksia slllllflfi iifsllgmql fggkfnfdet qtkrstfdnf pqalltvfqi
      721 ltgedwnavm ydgimayggp sssgmivciy fiilficgny illnvflaia vdnladaesl
      781 ntaqkeeaee kerkknarke slenkkteks egdqkkpkds kvtigeygeg eeedkdpypp
      841 cdvpvgedee deedepevpa gprprrisel nmkekitpip egsaffifss tnpirvgchr
      901 linhhiftnl ilvfimlssv slaaedpirs hsfrnnilgy adyvftsmft feiilkmtaf
      961 gaflhkgsfc rnyfnlldll vvgvslvsfg iqssaisvvk ilrvlrvlrp lrainrakgl
     1021 khvvqcvfva irtignimiv ttllqfmfac igvqlfkgkf ykctdeakqn peecrgiyiv
     1081 ykdgdvdspm vkervwqnsd fnfdnvlsam malftvstfe gwpallykai dsngenvgpv
     1141 ynyrveisif fiiyiiiiaf fmmnifvgfv ivtfqeqgeq eyknceldkn qrqcveyalk
     1201 arplrryipk npyqykfwyv vnstgfeyim fvlimlntlc lamqhygqsk lfndamdimn
     1261 mvftgvftve mvlkliafkp kifvrkkerw lgyfsdawnt fdslivigsi vdvvlseadp
     1321 kptetvttde sgnsedsari sitffrlfrv mrlvkllsrg egirtllwtf iksfqalpyv
     1381 alliamlffi yavigmqvfg kvamrdnnqi nrnnnfqtfp qavlllfrca tgeawqeiml
     1441 aclpgkrcdp esdynpgeey tcgsnfaiiy fisfymlcaf liinlfvavi mdnfdyltrd
     1501 wsilgphhld efkriwseyd peakgrikhl dvvtllrriq pplgfgklcp hrvackrlva
     1561 mnmplnsdgt vmfnatlfal vrtalkikte gnleqaneel ravikkiwkk tsmklldqvv
     1621 ppagddevtv gkfyatfliq dyfrkfkkrk eqglvgkypa knttialqag lrtlhdigpe
     1681 irraiscdlq ddepeennpe eeedvykrng alfgnhinhi ssdrrdsfqq intthrplhv
     1741 qrpsipsasd teknmyhqag nsvyhnhhnh nsvgkhvpns tnanlnnanv skvhgkhtsf
     1801 gnrehrseng yrshsrtdhe krrrpssrrt ryyetyirsd tgdgrrptir reehevqdyc
     1861 nddhylgeqe yysgeeyyed dsmlsgnrhr ydyhcryhch dsdferpkgy hhphgffeed
     1921 dsqicydtkr sprrrllppt ppphrrssfn feclrrqssq ddiplspnfh hrtalplhlm
     1981 qqqvmavagl dsskahkhsp srstrswatp patppyrers pyytpliqvd radstehmng
     2041 slpslhrssw ytddpdisyr tftpasltvp ndlrhkhsdk qrsadslvea vliseglgry
     2101 akdpkfvsat kheiadacdm tidemesaas nllngnisng tngdmfpils rqdyelqdfg
     2161 pgysdeepet gryeedlade micitsl
//
LOCUS       XP_041317198             384 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein adipocyte-associated 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317198
VERSION     XP_041317198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="transmembrane protein adipocyte-associated 1
                     isoform X1"
                     /calculated_mol_wt=42542
     Region          62..334
                     /region_name="Tmemb_40"
                     /note="Predicted membrane protein; pfam10160"
                     /db_xref="CDD:462970"
     CDS             1..384
                     /gene="TPRA1"
                     /coded_by="XM_041461264.1:224..1378"
                     /db_xref="GeneID:121350173"
ORIGIN      
        1 mfqsmmsvmt fsvsdniths talvtaldnv ttvspmttrv indtnitvph kcllllyedi
       61 gksrvrywdl lllvpnvlff mfllwklpsa rakirvtssp ifttfyilvf vvalvgiara
      121 vvsmtvsasd aamvadkilw eitrffllai elsvvilgla fghleskssv krvlaittvl
      181 slaysvtqgt leilypdahl saedfniygh ggrhfwlass cffflvyslv vilpktplkd
      241 rislpsrksf yiyagilall nlvqglgsal lcvdiieglc cvdattflyf sffapliyva
      301 flkgffgsep kilfsykcqv depedvdvhl phpyavakke gmdsgfysst qidttayldd
      361 vasmpyhvgs insidsdrwk sina
//
LOCUS       XP_041317209             384 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein adipocyte-associated 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317209
VERSION     XP_041317209.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461275.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="transmembrane protein adipocyte-associated 1
                     isoform X1"
                     /calculated_mol_wt=42542
     Region          62..334
                     /region_name="Tmemb_40"
                     /note="Predicted membrane protein; pfam10160"
                     /db_xref="CDD:462970"
     CDS             1..384
                     /gene="TPRA1"
                     /coded_by="XM_041461275.1:253..1407"
                     /db_xref="GeneID:121350173"
ORIGIN      
        1 mfqsmmsvmt fsvsdniths talvtaldnv ttvspmttrv indtnitvph kcllllyedi
       61 gksrvrywdl lllvpnvlff mfllwklpsa rakirvtssp ifttfyilvf vvalvgiara
      121 vvsmtvsasd aamvadkilw eitrffllai elsvvilgla fghleskssv krvlaittvl
      181 slaysvtqgt leilypdahl saedfniygh ggrhfwlass cffflvyslv vilpktplkd
      241 rislpsrksf yiyagilall nlvqglgsal lcvdiieglc cvdattflyf sffapliyva
      301 flkgffgsep kilfsykcqv depedvdvhl phpyavakke gmdsgfysst qidttayldd
      361 vasmpyhvgs insidsdrwk sina
//
LOCUS       XP_041317219             384 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein adipocyte-associated 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317219
VERSION     XP_041317219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461285.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="transmembrane protein adipocyte-associated 1
                     isoform X1"
                     /calculated_mol_wt=42542
     Region          62..334
                     /region_name="Tmemb_40"
                     /note="Predicted membrane protein; pfam10160"
                     /db_xref="CDD:462970"
     CDS             1..384
                     /gene="TPRA1"
                     /coded_by="XM_041461285.1:377..1531"
                     /db_xref="GeneID:121350173"
ORIGIN      
        1 mfqsmmsvmt fsvsdniths talvtaldnv ttvspmttrv indtnitvph kcllllyedi
       61 gksrvrywdl lllvpnvlff mfllwklpsa rakirvtssp ifttfyilvf vvalvgiara
      121 vvsmtvsasd aamvadkilw eitrffllai elsvvilgla fghleskssv krvlaittvl
      181 slaysvtqgt leilypdahl saedfniygh ggrhfwlass cffflvyslv vilpktplkd
      241 rislpsrksf yiyagilall nlvqglgsal lcvdiieglc cvdattflyf sffapliyva
      301 flkgffgsep kilfsykcqv depedvdvhl phpyavakke gmdsgfysst qidttayldd
      361 vasmpyhvgs insidsdrwk sina
//
LOCUS       XP_041317228             312 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein adipocyte-associated 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317228
VERSION     XP_041317228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="transmembrane protein adipocyte-associated 1
                     isoform X2"
                     /calculated_mol_wt=35135
     Region          62..>252
                     /region_name="Tmemb_40"
                     /note="Predicted membrane protein; pfam10160"
                     /db_xref="CDD:462970"
     CDS             1..312
                     /gene="TPRA1"
                     /coded_by="XM_041461294.1:225..1163"
                     /db_xref="GeneID:121350173"
ORIGIN      
        1 mfqsmmsvmt fsvsdniths talvtaldnv ttvspmttrv indtnitvph kcllllyedi
       61 gksrvrywdl lllvpnvlff mfllwklpsa rakirvtssp ifttfyilvf vvalvgiara
      121 vvsmtvsasd aamvadkilw eitrffllai elsvvilgla fghleskssv krvlaittvl
      181 slaysvtqgt leilypdahl saedfniygh ggrhfwlass cffflvyslv vilpktplkd
      241 rislpclnrr sfsptnvrwm nlrmwmctyp tlmllprrke wilgstqalr ltpqptwttw
      301 plchttwaas ta
//
LOCUS       XP_041317243              75 aa            linear   VRT 06-MAY-2021
DEFINITION  protein BRICK1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317243
VERSION     XP_041317243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..75
                     /product="protein BRICK1"
                     /calculated_mol_wt=8658
     CDS             1..75
                     /gene="BRK1"
                     /coded_by="XM_041461309.1:47..274"
                     /db_xref="GeneID:121350185"
ORIGIN      
        1 msvqedpvqr eihqdwanre yievitssik kiadflnsfd mscrsrlatl nekltalerr
       61 ieyiearvtk getlt
//
LOCUS       XP_041317256             406 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 4 regulatory subunit 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317256
VERSION     XP_041317256.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461322.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..406
                     /product="serine/threonine-protein phosphatase 4
                     regulatory subunit 2"
                     /calculated_mol_wt=44800
     Region          9..263
                     /region_name="PPP4R2"
                     /note="pfam09184"
                     /db_xref="CDD:462710"
     CDS             1..406
                     /gene="PPP4R2"
                     /coded_by="XM_041461322.1:150..1370"
                     /db_xref="GeneID:121350192"
ORIGIN      
        1 mdverlqeal kdfekrgkke vcpildqflc hvaktgetmv qwsqfkgyfi fklekvmddf
       61 rtsapeprgp pnpnveyipf eemkerilki vtgfngipft iqrlcelltd prrnytgtdk
      121 flrgveknvm vvscvypsse knnssslnrm ngvmfpgnsp gysdrsnvng pgtprpvsrt
      181 kvslsapmtt nglpdstehk epslqqteek khsespases egaqsspvkn khseddpaea
      241 eghevkrlkf dkegeardap nqtassevss gmgeeteass tsqdkekdas carqhcteee
      301 eeesfmsprn vgadrkdqdk dsdsssvaee sseesnqmee seqpraekdl hsadsdtsas
      361 atsgadcsdt eelgsyaret penssetpme nsdeateaad epmeqd
//
LOCUS       XP_041317269             772 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317269
VERSION     XP_041317269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="glutamine-rich protein 1"
                     /calculated_mol_wt=86302
     Region          <6..>45
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          595..755
                     /region_name="DUF3504"
                     /note="Domain of unknown function (DUF3504); pfam12012"
                     /db_xref="CDD:463430"
     CDS             1..772
                     /gene="QRICH1"
                     /coded_by="XM_041461335.1:175..2493"
                     /db_xref="GeneID:121350199"
ORIGIN      
        1 mnnslentis feeyirvkar tipqhrmkef ldslaskgpe alqefqqtat ttmvyqqggn
       61 ciytdsteva gsllelacpv ttsiqqqtqp eqqiqvqqpq qvqvqvqvqq spqqvsaqql
      121 spqlsvhqas eqpiqvqvqi qgqaqqqasq tiqsqslqsp spsqlqaaqi qvqhvqtaqq
      181 iqaaelqeeh iqhqqiqaql vagqaitggq qiqiqtvgal spppsqqgsp regerrissa
      241 svlqpvkkrk vdmpitvsya isgqpvatvl aipqgqqqsy vslrpdlltv dsahlysatg
      301 titsptgetw tipvysaqpr gdlqqqnith iaipqeayna vhvsgspttl atvkleddkd
      361 kmvgstsvvk nsheevvqtl ansifpaqfm ngnihipvav qavagtyqnt aqtvhiwdpq
      421 qqqqqptpqe qgqqqqlqvt csaqtvqvae vepqpqpqts pelllpnslk peeglevwks
      481 waqtknaele keaqnrlapi grrqllrfqe dlissavael nyglclmtre arngdgepyd
      541 pdvlyyiflc iqkylfengr vddifsdlyy irftewlhev lkdiqprvsp lgyilsshvt
      601 eemlweckql gahspstllt tlmffntkyf llktvdqhmk lafskvlrqt kknpsnpkdk
      661 stsirymkap gmhqtgqkvt ddmyaeqten penplrcpik lydfylfkcp qsvkgrndtf
      721 yltpepvvap nspiwysiqp isreqmeqml trilvireiq ealavanast mh
//
LOCUS       XP_041317278             772 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317278
VERSION     XP_041317278.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461344.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="glutamine-rich protein 1"
                     /calculated_mol_wt=86302
     Region          <6..>45
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          595..755
                     /region_name="DUF3504"
                     /note="Domain of unknown function (DUF3504); pfam12012"
                     /db_xref="CDD:463430"
     CDS             1..772
                     /gene="QRICH1"
                     /coded_by="XM_041461344.1:331..2649"
                     /db_xref="GeneID:121350199"
ORIGIN      
        1 mnnslentis feeyirvkar tipqhrmkef ldslaskgpe alqefqqtat ttmvyqqggn
       61 ciytdsteva gsllelacpv ttsiqqqtqp eqqiqvqqpq qvqvqvqvqq spqqvsaqql
      121 spqlsvhqas eqpiqvqvqi qgqaqqqasq tiqsqslqsp spsqlqaaqi qvqhvqtaqq
      181 iqaaelqeeh iqhqqiqaql vagqaitggq qiqiqtvgal spppsqqgsp regerrissa
      241 svlqpvkkrk vdmpitvsya isgqpvatvl aipqgqqqsy vslrpdlltv dsahlysatg
      301 titsptgetw tipvysaqpr gdlqqqnith iaipqeayna vhvsgspttl atvkleddkd
      361 kmvgstsvvk nsheevvqtl ansifpaqfm ngnihipvav qavagtyqnt aqtvhiwdpq
      421 qqqqqptpqe qgqqqqlqvt csaqtvqvae vepqpqpqts pelllpnslk peeglevwks
      481 waqtknaele keaqnrlapi grrqllrfqe dlissavael nyglclmtre arngdgepyd
      541 pdvlyyiflc iqkylfengr vddifsdlyy irftewlhev lkdiqprvsp lgyilsshvt
      601 eemlweckql gahspstllt tlmffntkyf llktvdqhmk lafskvlrqt kknpsnpkdk
      661 stsirymkap gmhqtgqkvt ddmyaeqten penplrcpik lydfylfkcp qsvkgrndtf
      721 yltpepvvap nspiwysiqp isreqmeqml trilvireiq ealavanast mh
//
LOCUS       XP_041317288             772 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317288
VERSION     XP_041317288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="glutamine-rich protein 1"
                     /calculated_mol_wt=86302
     Region          <6..>45
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          595..755
                     /region_name="DUF3504"
                     /note="Domain of unknown function (DUF3504); pfam12012"
                     /db_xref="CDD:463430"
     CDS             1..772
                     /gene="QRICH1"
                     /coded_by="XM_041461354.1:118..2436"
                     /db_xref="GeneID:121350199"
ORIGIN      
        1 mnnslentis feeyirvkar tipqhrmkef ldslaskgpe alqefqqtat ttmvyqqggn
       61 ciytdsteva gsllelacpv ttsiqqqtqp eqqiqvqqpq qvqvqvqvqq spqqvsaqql
      121 spqlsvhqas eqpiqvqvqi qgqaqqqasq tiqsqslqsp spsqlqaaqi qvqhvqtaqq
      181 iqaaelqeeh iqhqqiqaql vagqaitggq qiqiqtvgal spppsqqgsp regerrissa
      241 svlqpvkkrk vdmpitvsya isgqpvatvl aipqgqqqsy vslrpdlltv dsahlysatg
      301 titsptgetw tipvysaqpr gdlqqqnith iaipqeayna vhvsgspttl atvkleddkd
      361 kmvgstsvvk nsheevvqtl ansifpaqfm ngnihipvav qavagtyqnt aqtvhiwdpq
      421 qqqqqptpqe qgqqqqlqvt csaqtvqvae vepqpqpqts pelllpnslk peeglevwks
      481 waqtknaele keaqnrlapi grrqllrfqe dlissavael nyglclmtre arngdgepyd
      541 pdvlyyiflc iqkylfengr vddifsdlyy irftewlhev lkdiqprvsp lgyilsshvt
      601 eemlweckql gahspstllt tlmffntkyf llktvdqhmk lafskvlrqt kknpsnpkdk
      661 stsirymkap gmhqtgqkvt ddmyaeqten penplrcpik lydfylfkcp qsvkgrndtf
      721 yltpepvvap nspiwysiqp isreqmeqml trilvireiq ealavanast mh
//
LOCUS       XP_041317296             772 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317296
VERSION     XP_041317296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="glutamine-rich protein 1"
                     /calculated_mol_wt=86302
     Region          <6..>45
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          595..755
                     /region_name="DUF3504"
                     /note="Domain of unknown function (DUF3504); pfam12012"
                     /db_xref="CDD:463430"
     CDS             1..772
                     /gene="QRICH1"
                     /coded_by="XM_041461362.1:115..2433"
                     /db_xref="GeneID:121350199"
ORIGIN      
        1 mnnslentis feeyirvkar tipqhrmkef ldslaskgpe alqefqqtat ttmvyqqggn
       61 ciytdsteva gsllelacpv ttsiqqqtqp eqqiqvqqpq qvqvqvqvqq spqqvsaqql
      121 spqlsvhqas eqpiqvqvqi qgqaqqqasq tiqsqslqsp spsqlqaaqi qvqhvqtaqq
      181 iqaaelqeeh iqhqqiqaql vagqaitggq qiqiqtvgal spppsqqgsp regerrissa
      241 svlqpvkkrk vdmpitvsya isgqpvatvl aipqgqqqsy vslrpdlltv dsahlysatg
      301 titsptgetw tipvysaqpr gdlqqqnith iaipqeayna vhvsgspttl atvkleddkd
      361 kmvgstsvvk nsheevvqtl ansifpaqfm ngnihipvav qavagtyqnt aqtvhiwdpq
      421 qqqqqptpqe qgqqqqlqvt csaqtvqvae vepqpqpqts pelllpnslk peeglevwks
      481 waqtknaele keaqnrlapi grrqllrfqe dlissavael nyglclmtre arngdgepyd
      541 pdvlyyiflc iqkylfengr vddifsdlyy irftewlhev lkdiqprvsp lgyilsshvt
      601 eemlweckql gahspstllt tlmffntkyf llktvdqhmk lafskvlrqt kknpsnpkdk
      661 stsirymkap gmhqtgqkvt ddmyaeqten penplrcpik lydfylfkcp qsvkgrndtf
      721 yltpepvvap nspiwysiqp isreqmeqml trilvireiq ealavanast mh
//
LOCUS       XP_041317306             772 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317306
VERSION     XP_041317306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="glutamine-rich protein 1"
                     /calculated_mol_wt=86302
     Region          <6..>45
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          595..755
                     /region_name="DUF3504"
                     /note="Domain of unknown function (DUF3504); pfam12012"
                     /db_xref="CDD:463430"
     CDS             1..772
                     /gene="QRICH1"
                     /coded_by="XM_041461372.1:188..2506"
                     /db_xref="GeneID:121350199"
ORIGIN      
        1 mnnslentis feeyirvkar tipqhrmkef ldslaskgpe alqefqqtat ttmvyqqggn
       61 ciytdsteva gsllelacpv ttsiqqqtqp eqqiqvqqpq qvqvqvqvqq spqqvsaqql
      121 spqlsvhqas eqpiqvqvqi qgqaqqqasq tiqsqslqsp spsqlqaaqi qvqhvqtaqq
      181 iqaaelqeeh iqhqqiqaql vagqaitggq qiqiqtvgal spppsqqgsp regerrissa
      241 svlqpvkkrk vdmpitvsya isgqpvatvl aipqgqqqsy vslrpdlltv dsahlysatg
      301 titsptgetw tipvysaqpr gdlqqqnith iaipqeayna vhvsgspttl atvkleddkd
      361 kmvgstsvvk nsheevvqtl ansifpaqfm ngnihipvav qavagtyqnt aqtvhiwdpq
      421 qqqqqptpqe qgqqqqlqvt csaqtvqvae vepqpqpqts pelllpnslk peeglevwks
      481 waqtknaele keaqnrlapi grrqllrfqe dlissavael nyglclmtre arngdgepyd
      541 pdvlyyiflc iqkylfengr vddifsdlyy irftewlhev lkdiqprvsp lgyilsshvt
      601 eemlweckql gahspstllt tlmffntkyf llktvdqhmk lafskvlrqt kknpsnpkdk
      661 stsirymkap gmhqtgqkvt ddmyaeqten penplrcpik lydfylfkcp qsvkgrndtf
      721 yltpepvvap nspiwysiqp isreqmeqml trilvireiq ealavanast mh
//
LOCUS       XP_041317318             606 aa            linear   VRT 06-MAY-2021
DEFINITION  DALR anticodon-binding domain-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317318
VERSION     XP_041317318.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461384.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..606
                     /product="DALR anticodon-binding domain-containing protein
                     3 isoform X1"
                     /calculated_mol_wt=63366
     Site            order(451,456,459,468,472..473,483..484,547,554,557,560)
                     /site_type="other"
                     /note="tRNA binding surface [nucleotide binding]"
                     /db_xref="CDD:153408"
     Region          466..606
                     /region_name="DALR_1"
                     /note="DALR anticodon binding domain; smart00836"
                     /db_xref="CDD:214846"
     Site            order(468,471..472,483..484,560)
                     /site_type="active"
                     /note="anticodon binding site [active]"
                     /db_xref="CDD:153408"
     CDS             1..606
                     /gene="DALRD3"
                     /coded_by="XM_041461384.1:357..2177"
                     /db_xref="GeneID:121350219"
ORIGIN      
        1 mgdemsegrp gvaatlraln galgrpaalw vkengarnlr hrdflapraa lsaafpggqv
       61 graagaglgr erdlrelfdg ggagaasara artpprpppa gaprgrvgga vaagpggaaa
      121 aglpadagga ggagapprgl papaaasarp gpprgagglr gaalpgparp rrpaappppl
      181 rpagrapgpa aartgvsapg pscsrpraag paapsaclal srrvdvrlvp alseesswdv
      241 lrqlricwps gsagsslaea isalkaalgr cpcasiceqg pgtaqggick vhlksfveqq
      301 gllgydpnld vllvtertlq claelqeavl qcpakgqssc csivhvvnce eefqqqqldv
      361 lwrildpgah talqkhlvcg pvkvtnpssp igadqyfqlr khqmyeasvi kygelaqdea
      421 wtevidtltv aairfemlst ahrsqitldl enssistkgt ksgafvmync arlatlfstf
      481 qqavergtyp plppvselnf sclreegewl llfnyllpfp evlqqaaqlp apskgirita
      541 ntetvckfli qlsmdfssyy nrvhilgepf phlfdqmfar lqllgavrdv fhsalatlhl
      601 pplsqi
//
LOCUS       XP_041317327             537 aa            linear   VRT 06-MAY-2021
DEFINITION  DALR anticodon-binding domain-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317327
VERSION     XP_041317327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="DALR anticodon-binding domain-containing protein
                     3 isoform X2"
                     /calculated_mol_wt=58397
     Site            order(382,387,390,399,403..404,414..415,478,485,488,491)
                     /site_type="other"
                     /note="tRNA binding surface [nucleotide binding]"
                     /db_xref="CDD:153408"
     Region          397..537
                     /region_name="DALR_1"
                     /note="DALR anticodon binding domain; smart00836"
                     /db_xref="CDD:214846"
     Site            order(399,402..403,414..415,491)
                     /site_type="active"
                     /note="anticodon binding site [active]"
                     /db_xref="CDD:153408"
     CDS             1..537
                     /gene="DALRD3"
                     /coded_by="XM_041461393.1:321..1934"
                     /db_xref="GeneID:121350219"
ORIGIN      
        1 mgdemsegrp gvaatlraln galgrpaalw vkengarnlr hrdflapraa lsaafpggqv
       61 ppeavsavrs lrgpavlplr dcrqtpagla vqvhrpeafq rllrpppgpa lpaaragcvv
      121 lhcpalrgpa alrprhlrsv llaehlaqll raqgvdvrlv palseesswd vlrqlricwp
      181 sgsagsslae aisalkaalg rcpcasiceq gpgtaqggic kvhlksfveq qgllgydpnl
      241 dvllvtertl qclaelqeav lqcpakgqss ccsivhvvnc eeefqqqqld vlwrildpga
      301 htalqkhlvc gpvkvtnpss pigadqyfql rkhqmyeasv ikygelaqde awtevidtlt
      361 vaairfemls tahrsqitld lenssistkg tksgafvmyn carlatlfst fqqavergty
      421 pplppvseln fsclreegew lllfnyllpf pevlqqaaql papskgirit antetvckfl
      481 iqlsmdfssy ynrvhilgep fphlfdqmfa rlqllgavrd vfhsalatlh lpplsqi
//
LOCUS       XP_041317338             538 aa            linear   VRT 06-MAY-2021
DEFINITION  inosine-5'-monophosphate dehydrogenase 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317338
VERSION     XP_041317338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461404.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..538
                     /product="inosine-5'-monophosphate dehydrogenase 2 isoform
                     X1"
                     /calculated_mol_wt=57952
     Region          15..538
                     /region_name="PLN02274"
                     /note="inosine-5'-monophosphate dehydrogenase"
                     /db_xref="CDD:215154"
     CDS             1..538
                     /gene="IMPDH2"
                     /coded_by="XM_041461404.1:98..1714"
                     /db_xref="GeneID:121350234"
ORIGIN      
        1 madylisggt gyvpddglta qqlfscgdgl tyndflilpg yidftadqvd ltsaltkrit
       61 lktplvsspm dtvteasmai amaltggigf ihhnctpefq anevrkvkky eqgfitdpvv
      121 lspndrvrdv feakarhgfc gipitdngkm ggklvgiiss rdidflkese hdlplgeimt
      181 kredlvvapa gvmlkeanei lqrskkgklp ivneddelva iiartdlkkn rdyplaskds
      241 kkqllcgaai gtheddkyrl dllvqagvda vvldssqgns ifqinmikyi kekypnlqvi
      301 ggnvvtaaqa knlidagvda lrvgmgsgsi citqeaapki ppdlkshspk cpstvtgtym
      361 lacgrpqata vykvseyarr fgvpviadgg iqtvghiaka lalgastvmm gsllaattea
      421 pgeyffsdgi rlkkyrgmgs ldamdknlgs qnryfsetdk ikvaqgvsga vqdkgsihkf
      481 ipyliagiqh scqdigaksl tqvrammysg elkfekrtts aqveggvhgl hsyekrlf
//
LOCUS       XP_041317347             514 aa            linear   VRT 06-MAY-2021
DEFINITION  inosine-5'-monophosphate dehydrogenase 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317347
VERSION     XP_041317347.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461413.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..514
                     /product="inosine-5'-monophosphate dehydrogenase 2 isoform
                     X2"
                     /calculated_mol_wt=55442
     Region          15..514
                     /region_name="PLN02274"
                     /note="inosine-5'-monophosphate dehydrogenase"
                     /db_xref="CDD:215154"
     CDS             1..514
                     /gene="IMPDH2"
                     /coded_by="XM_041461413.1:98..1642"
                     /db_xref="GeneID:121350234"
ORIGIN      
        1 madylisggt gyvpddglta qqlfscgdgl tyndflilpg yidftadqvd ltsaltkrit
       61 lktplvsspm dtvteasmai amaltggigf ihhnctpefq anevrkvkky eqgfitdpvv
      121 lspndrvrdv feakarhgfc gipitdngkm ggklvgiiss rdidflkese hdlplgeimt
      181 kredlvvapa gvmlkeanei lqrskkgklp ivneddelva iiartdlkkn rdyplaskds
      241 kkqllcgaai gtheddkyrl dllvqagvda vvldssqgns ifqinmikyi kekypnlqvi
      301 ggnvvtaaqa knlidagvda lrvgmgsgsi citqevlacg rpqatavykv seyarrfgvp
      361 viadggiqtv ghiakalalg astvmmgsll aatteapgey ffsdgirlkk yrgmgsldam
      421 dknlgsqnry fsetdkikva qgvsgavqdk gsihkfipyl iagiqhscqd igaksltqvr
      481 ammysgelkf ekrttsaqve ggvhglhsye krlf
//
LOCUS       XP_041317360             490 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317360
VERSION     XP_041317360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="E3 ubiquitin-protein ligase ARIH2 isoform X1"
                     /calculated_mol_wt=57198
     Region          134..185
                     /region_name="RING-HC_RBR_TRIAD1"
                     /note="RING finger, HC subclass, found in two RING fingers
                     and DRIL [double RING finger linked] 1 (TRIAD1); cd16773"
                     /db_xref="CDD:438429"
     Region          214..285
                     /region_name="BRcat_RBR_TRIAD1"
                     /note="BRcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20344"
                     /db_xref="CDD:439005"
     Region          289..344
                     /region_name="Rcat_RBR_TRIAD1"
                     /note="Rcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20360"
                     /db_xref="CDD:439021"
     Region          349..>475
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..490
                     /gene="ARIH2"
                     /coded_by="XM_041461426.1:238..1710"
                     /db_xref="GeneID:121350248"
ORIGIN      
        1 msvdmnsqgs dsneedydpn ceeeeededp gdiedyydgv andveqqgad afdpeeyqft
       61 cltykesest lnehmaslaa tlkvshavak lvlvsfhwqi seilerhkan paqllvearv
      121 qptsskhamv hsshhcavcm qfvrkenlls lacqhqfcrs cweqhctvlv kdgvgvgvsc
      181 maqdcllrtp edfvfpllps eelkdkyrry lfrdyveshy qlqlcpgadc pmviqvqepk
      241 arrvqcnrcn evfcfkcrqm yhaptdcati rkwltkcadd setanyisah tkdcpkcnic
      301 ieknggcnhm qcskckhdfc wmclgdwkth gseyyecsry kenpdivnqs qqaqarealk
      361 kylfyferwe nhnkslqlea qtyqriqeki qervmnnlgt widwqylqna akllakcryt
      421 lqytypyayy mesgprkklf eyqqaqleae ienlswkver adsydrgdle nqmhiaeqrr
      481 rtllkdfhdt
//
LOCUS       XP_041317368             490 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317368
VERSION     XP_041317368.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461434.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="E3 ubiquitin-protein ligase ARIH2 isoform X1"
                     /calculated_mol_wt=57198
     Region          134..185
                     /region_name="RING-HC_RBR_TRIAD1"
                     /note="RING finger, HC subclass, found in two RING fingers
                     and DRIL [double RING finger linked] 1 (TRIAD1); cd16773"
                     /db_xref="CDD:438429"
     Region          214..285
                     /region_name="BRcat_RBR_TRIAD1"
                     /note="BRcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20344"
                     /db_xref="CDD:439005"
     Region          289..344
                     /region_name="Rcat_RBR_TRIAD1"
                     /note="Rcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20360"
                     /db_xref="CDD:439021"
     Region          349..>475
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..490
                     /gene="ARIH2"
                     /coded_by="XM_041461434.1:121..1593"
                     /db_xref="GeneID:121350248"
ORIGIN      
        1 msvdmnsqgs dsneedydpn ceeeeededp gdiedyydgv andveqqgad afdpeeyqft
       61 cltykesest lnehmaslaa tlkvshavak lvlvsfhwqi seilerhkan paqllvearv
      121 qptsskhamv hsshhcavcm qfvrkenlls lacqhqfcrs cweqhctvlv kdgvgvgvsc
      181 maqdcllrtp edfvfpllps eelkdkyrry lfrdyveshy qlqlcpgadc pmviqvqepk
      241 arrvqcnrcn evfcfkcrqm yhaptdcati rkwltkcadd setanyisah tkdcpkcnic
      301 ieknggcnhm qcskckhdfc wmclgdwkth gseyyecsry kenpdivnqs qqaqarealk
      361 kylfyferwe nhnkslqlea qtyqriqeki qervmnnlgt widwqylqna akllakcryt
      421 lqytypyayy mesgprkklf eyqqaqleae ienlswkver adsydrgdle nqmhiaeqrr
      481 rtllkdfhdt
//
LOCUS       XP_041317377             490 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317377
VERSION     XP_041317377.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461443.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="E3 ubiquitin-protein ligase ARIH2 isoform X1"
                     /calculated_mol_wt=57198
     Region          134..185
                     /region_name="RING-HC_RBR_TRIAD1"
                     /note="RING finger, HC subclass, found in two RING fingers
                     and DRIL [double RING finger linked] 1 (TRIAD1); cd16773"
                     /db_xref="CDD:438429"
     Region          214..285
                     /region_name="BRcat_RBR_TRIAD1"
                     /note="BRcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20344"
                     /db_xref="CDD:439005"
     Region          289..344
                     /region_name="Rcat_RBR_TRIAD1"
                     /note="Rcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20360"
                     /db_xref="CDD:439021"
     Region          349..>475
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..490
                     /gene="ARIH2"
                     /coded_by="XM_041461443.1:238..1710"
                     /db_xref="GeneID:121350248"
ORIGIN      
        1 msvdmnsqgs dsneedydpn ceeeeededp gdiedyydgv andveqqgad afdpeeyqft
       61 cltykesest lnehmaslaa tlkvshavak lvlvsfhwqi seilerhkan paqllvearv
      121 qptsskhamv hsshhcavcm qfvrkenlls lacqhqfcrs cweqhctvlv kdgvgvgvsc
      181 maqdcllrtp edfvfpllps eelkdkyrry lfrdyveshy qlqlcpgadc pmviqvqepk
      241 arrvqcnrcn evfcfkcrqm yhaptdcati rkwltkcadd setanyisah tkdcpkcnic
      301 ieknggcnhm qcskckhdfc wmclgdwkth gseyyecsry kenpdivnqs qqaqarealk
      361 kylfyferwe nhnkslqlea qtyqriqeki qervmnnlgt widwqylqna akllakcryt
      421 lqytypyayy mesgprkklf eyqqaqleae ienlswkver adsydrgdle nqmhiaeqrr
      481 rtllkdfhdt
//
LOCUS       XP_041317384             490 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317384
VERSION     XP_041317384.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461450.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="E3 ubiquitin-protein ligase ARIH2 isoform X1"
                     /calculated_mol_wt=57198
     Region          134..185
                     /region_name="RING-HC_RBR_TRIAD1"
                     /note="RING finger, HC subclass, found in two RING fingers
                     and DRIL [double RING finger linked] 1 (TRIAD1); cd16773"
                     /db_xref="CDD:438429"
     Region          214..285
                     /region_name="BRcat_RBR_TRIAD1"
                     /note="BRcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20344"
                     /db_xref="CDD:439005"
     Region          289..344
                     /region_name="Rcat_RBR_TRIAD1"
                     /note="Rcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20360"
                     /db_xref="CDD:439021"
     Region          349..>475
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..490
                     /gene="ARIH2"
                     /coded_by="XM_041461450.1:238..1710"
                     /db_xref="GeneID:121350248"
ORIGIN      
        1 msvdmnsqgs dsneedydpn ceeeeededp gdiedyydgv andveqqgad afdpeeyqft
       61 cltykesest lnehmaslaa tlkvshavak lvlvsfhwqi seilerhkan paqllvearv
      121 qptsskhamv hsshhcavcm qfvrkenlls lacqhqfcrs cweqhctvlv kdgvgvgvsc
      181 maqdcllrtp edfvfpllps eelkdkyrry lfrdyveshy qlqlcpgadc pmviqvqepk
      241 arrvqcnrcn evfcfkcrqm yhaptdcati rkwltkcadd setanyisah tkdcpkcnic
      301 ieknggcnhm qcskckhdfc wmclgdwkth gseyyecsry kenpdivnqs qqaqarealk
      361 kylfyferwe nhnkslqlea qtyqriqeki qervmnnlgt widwqylqna akllakcryt
      421 lqytypyayy mesgprkklf eyqqaqleae ienlswkver adsydrgdle nqmhiaeqrr
      481 rtllkdfhdt
//
LOCUS       XP_041317393             446 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317393
VERSION     XP_041317393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="E3 ubiquitin-protein ligase ARIH2 isoform X2"
                     /calculated_mol_wt=51771
     Region          134..185
                     /region_name="RING-HC_RBR_TRIAD1"
                     /note="RING finger, HC subclass, found in two RING fingers
                     and DRIL [double RING finger linked] 1 (TRIAD1); cd16773"
                     /db_xref="CDD:438429"
     Region          214..285
                     /region_name="BRcat_RBR_TRIAD1"
                     /note="BRcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20344"
                     /db_xref="CDD:439005"
     Region          289..344
                     /region_name="Rcat_RBR_TRIAD1"
                     /note="Rcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20360"
                     /db_xref="CDD:439021"
     Region          349..>431
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..446
                     /gene="ARIH2"
                     /coded_by="XM_041461459.1:238..1578"
                     /db_xref="GeneID:121350248"
ORIGIN      
        1 msvdmnsqgs dsneedydpn ceeeeededp gdiedyydgv andveqqgad afdpeeyqft
       61 cltykesest lnehmaslaa tlkvshavak lvlvsfhwqi seilerhkan paqllvearv
      121 qptsskhamv hsshhcavcm qfvrkenlls lacqhqfcrs cweqhctvlv kdgvgvgvsc
      181 maqdcllrtp edfvfpllps eelkdkyrry lfrdyveshy qlqlcpgadc pmviqvqepk
      241 arrvqcnrcn evfcfkcrqm yhaptdcati rkwltkcadd setanyisah tkdcpkcnic
      301 ieknggcnhm qcskckhdfc wmclgdwkth gseyyecsry kenpdivnqs qqaqarealk
      361 kylfyferwe nhnkslqlea qtyqriqeki qervmnnlgt widwqylqna akllakcryt
      421 lqytypyayy mesgprkklg tslhfh
//
LOCUS       XP_041317403             362 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317403
VERSION     XP_041317403.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461469.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="E3 ubiquitin-protein ligase ARIH2 isoform X3"
                     /calculated_mol_wt=42861
     Region          6..57
                     /region_name="RING-HC_RBR_TRIAD1"
                     /note="RING finger, HC subclass, found in two RING fingers
                     and DRIL [double RING finger linked] 1 (TRIAD1); cd16773"
                     /db_xref="CDD:438429"
     Region          86..157
                     /region_name="BRcat_RBR_TRIAD1"
                     /note="BRcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20344"
                     /db_xref="CDD:439005"
     Region          161..216
                     /region_name="Rcat_RBR_TRIAD1"
                     /note="Rcat domain found in two RING fingers and DRIL
                     [double RING finger linked] 1 (TRIAD1); cd20360"
                     /db_xref="CDD:439021"
     Region          221..>347
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..362
                     /gene="ARIH2"
                     /coded_by="XM_041461469.1:266..1354"
                     /db_xref="GeneID:121350248"
ORIGIN      
        1 mvhsshhcav cmqfvrkenl lslacqhqfc rscweqhctv lvkdgvgvgv scmaqdcllr
       61 tpedfvfpll pseelkdkyr rylfrdyves hyqlqlcpga dcpmviqvqe pkarrvqcnr
      121 cnevfcfkcr qmyhaptdca tirkwltkca ddsetanyis ahtkdcpkcn icieknggcn
      181 hmqcskckhd fcwmclgdwk thgseyyecs rykenpdivn qsqqaqarea lkkylfyfer
      241 wenhnkslql eaqtyqriqe kiqervmnnl gtwidwqylq naakllakcr ytlqytypya
      301 yymesgprkk lfeyqqaqle aeienlswkv eradsydrgd lenqmhiaeq rrrtllkdfh
      361 dt
//
LOCUS       XP_041317415             306 aa            linear   VRT 06-MAY-2021
DEFINITION  secreted frizzled-related protein 5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041317415
VERSION     XP_041317415.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461481.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="secreted frizzled-related protein 5-like"
                     /calculated_mol_wt=34884
     Region          41..175
                     /region_name="CRD_crescent"
                     /note="Cysteine-rich domain of the crescent protein;
                     cd07453"
                     /db_xref="CDD:143562"
     Site            order(52,54..56,58..60)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143562"
     Region          169..298
                     /region_name="NTR_Sfrp1_like"
                     /note="NTR domain, Secreted frizzled-related protein
                     (Sfrp) 1-like subfamily; composed of proteins similar to
                     human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins
                     containing an NTR domain C-terminal to a cysteine-rich
                     Frizzled domain. They show diverse...; cd03580"
                     /db_xref="CDD:239635"
     CDS             1..306
                     /gene="LOC121350276"
                     /coded_by="XM_041461481.1:1797..2717"
                     /db_xref="GeneID:121350276"
ORIGIN      
        1 mvrslrrhpw rwggpwllgl larlllwgsp gawasylrrs sscmpipqhm alcydigyse
       61 mripnllehe tmteviqqss swlpllarec hpdariflcs lfapicldrl iypcrslcea
      121 vkrscapvma cygypwpeil ncnkfpadhe lciaavsmde nsssrrmpra sckdceleea
      181 stareilesl candfavkir ilrrntttti sdfdldpskv evlkhgpllr teiparlqqw
      241 ldidatcahn imrgtqagvf vvsgdvqsdk vvvnkayawq krnrnlhqav rrwkhhrcpe
      301 qagwkv
//
LOCUS       XP_041317432             301 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial carnitine/acylcarnitine carrier protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317432
VERSION     XP_041317432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="mitochondrial carnitine/acylcarnitine carrier
                     protein"
                     /calculated_mol_wt=32626
     Region          6..103
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          106..198
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          205..294
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..301
                     /gene="SLC25A20"
                     /coded_by="XM_041461498.1:265..1170"
                     /db_xref="GeneID:121350287"
ORIGIN      
        1 makqpqpisp lknffaggfg gvclvfvghp ldtikvrlqt qpkpqpgqap lysgtfdcfr
       61 ktlvgegvqg lyrgmaapii gvtpmfavcf fgfglgkrlq qrkpddvlty pqlfaagmls
      121 gvfttvimap gerikcllqi qaatgetkys gsldcakqly reagirgvyk gtvltlmrdv
      181 pasgmyfmty ewlkniltpe gksvsdlsvp rilfagglag ifnwavaipp dvlksrfqta
      241 pagkypngfr dvlreliree gvaslykgft avmirafpan aacflgfeva mkflnwiapg
      301 l
//
LOCUS       XP_041317444             183 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
            3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317444
VERSION     XP_041317444.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461510.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex assembly factor 3 isoform X1"
                     /calculated_mol_wt=20336
     Region          65..178
                     /region_name="Mth938_2P1-like"
                     /note="Mth938_2P1-like domain. This model contains
                     sequences that are similar to 2P1, a partially
                     characterized nuclear protein, which is homologous to E3-3
                     from rat and known to be alternatively spliced. Its
                     function is unknown. This family is part of the...;
                     cd05125"
                     /db_xref="CDD:240161"
     CDS             1..183
                     /gene="NDUFAF3"
                     /coded_by="XM_041461510.1:123..674"
                     /db_xref="GeneID:121350293"
ORIGIN      
        1 maalrrlvpa vgraagrdrh rqpaprllcd rgrapfrshr ltpaddemyq rtrvmmlepe
       61 spnimfiegy strgftisgd lvvgpcavlp rsilqwnvgs hrdislesls lfrllepqie
      121 ilvlgtgdrv erlhpttmkq mrecgiavev qdtanacatf nflmnerrvv aaglipprgt
      181 ygv
//
LOCUS       XP_041317452             167 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
            3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041317452
VERSION     XP_041317452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..167
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex assembly factor 3 isoform X2"
                     /calculated_mol_wt=18407
     Region          49..162
                     /region_name="Mth938_2P1-like"
                     /note="Mth938_2P1-like domain. This model contains
                     sequences that are similar to 2P1, a partially
                     characterized nuclear protein, which is homologous to E3-3
                     from rat and known to be alternatively spliced. Its
                     function is unknown. This family is part of the...;
                     cd05125"
                     /db_xref="CDD:240161"
     CDS             1..167
                     /gene="NDUFAF3"
                     /coded_by="XM_041461518.1:34..537"
                     /db_xref="GeneID:121350293"
ORIGIN      
        1 maalrrlvpa vgraagrapf rshrltpadd emyqrtrvmm lepespnimf iegystrgft
       61 isgdlvvgpc avlprsilqw nvgshrdisl eslslfrlle pqieilvlgt gdrverlhpt
      121 tmkqmrecgi avevqdtana catfnflmne rrvvaaglip prgtygv
//
LOCUS       XP_041317465             403 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041317465
VERSION     XP_041317465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="Krueppel-like factor 15"
                     /calculated_mol_wt=44507
     Region          3..308
                     /region_name="KLF15_N"
                     /note="N-terminal domain of Kruppel-like factor 15;
                     cd21580"
                     /db_xref="CDD:410206"
     Region          <293..388
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          310..332
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(317,319,321,323..324,327..328,331,347,349,353..354,
                     357..358,361,375,377,379,381..382,385..386,389)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          340..362
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          354..379
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..403
                     /gene="KLF15"
                     /coded_by="XM_041461531.1:653..1864"
                     /db_xref="GeneID:121350306"
ORIGIN      
        1 mvdhllptde sfsstrsslg yfgdmtagvr syqmlpspls eddsdsssfc scsspdsqvl
       61 sssygstssa esqdsildyl lsqaslgntt aswwdkrrlq pivkeeyfrl pefpvdmeds
      121 gpfqptleei eefleenmdl elkerpkset kdlracsqvs vaslqqkdhm lpstslkesk
      181 neqltssteg gqasnggmtl engipvmlqi qpvqikqess tsptsqgpaq enikiaqllv
      241 niqgqtfalv pqivqssnln lsskfvriap vpiaakpigp ggmiqgqtgi imgqkfqknp
      301 aaelikmhkc sfpgctkmyt ksshlkahlr rhtgekpfac twpgcgwrfs rsdelsrhrr
      361 shsgvkpyqc pvcekkfars dhlskhvkvh rfprssrsvr svn
//
LOCUS       XP_041317475             403 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041317475
VERSION     XP_041317475.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461541.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="Krueppel-like factor 15"
                     /calculated_mol_wt=44507
     Region          3..308
                     /region_name="KLF15_N"
                     /note="N-terminal domain of Kruppel-like factor 15;
                     cd21580"
                     /db_xref="CDD:410206"
     Region          <293..388
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          310..332
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(317,319,321,323..324,327..328,331,347,349,353..354,
                     357..358,361,375,377,379,381..382,385..386,389)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          340..362
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          354..379
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          370..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..403
                     /gene="KLF15"
                     /coded_by="XM_041461541.1:437..1648"
                     /db_xref="GeneID:121350306"
ORIGIN      
        1 mvdhllptde sfsstrsslg yfgdmtagvr syqmlpspls eddsdsssfc scsspdsqvl
       61 sssygstssa esqdsildyl lsqaslgntt aswwdkrrlq pivkeeyfrl pefpvdmeds
      121 gpfqptleei eefleenmdl elkerpkset kdlracsqvs vaslqqkdhm lpstslkesk
      181 neqltssteg gqasnggmtl engipvmlqi qpvqikqess tsptsqgpaq enikiaqllv
      241 niqgqtfalv pqivqssnln lsskfvriap vpiaakpigp ggmiqgqtgi imgqkfqknp
      301 aaelikmhkc sfpgctkmyt ksshlkahlr rhtgekpfac twpgcgwrfs rsdelsrhrr
      361 shsgvkpyqc pvcekkfars dhlskhvkvh rfprssrsvr svn
//
LOCUS       XP_041317487             434 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317487
VERSION     XP_041317487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="inositol hexakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=49332
     Region          208..427
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..434
                     /gene="IP6K1"
                     /coded_by="XM_041461553.1:395..1699"
                     /db_xref="GeneID:121350315"
ORIGIN      
        1 mcvcqtmevg kygknatrsg drgvllepfi hqvgghssmm ryddhtvckp litreqrfye
       61 slppemkeft peykgvvsvc fegdsdgyin lvaypyvene aleqddlper dqprrkhsrr
      121 slhrsssgte hkeekpglas dstessiqet ksprvdlhih sdvpfqmldg nsglssekis
      181 ynpwslrchk qqlsrmrses kdrklykfll lenvvhhfkl pcvldlkmgt rqhgddasee
      241 kaarqmkkce qstsatlgvr vcgmqvyqld tghylcrnky ygrglsiegf rnalyqylhn
      301 gielrkdlfe pvlaklrslk avlerqasyr fyssslliiy dgkdsragtl lerrpearlk
      361 rvegsvpegl qdgggsepgs saqpkvdvrm idfahstfkg frddptvhdg pdmgyvfgle
      421 slinimeqmr eenq
//
LOCUS       XP_041317497             434 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317497
VERSION     XP_041317497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="inositol hexakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=49332
     Region          208..427
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..434
                     /gene="IP6K1"
                     /coded_by="XM_041461563.1:510..1814"
                     /db_xref="GeneID:121350315"
ORIGIN      
        1 mcvcqtmevg kygknatrsg drgvllepfi hqvgghssmm ryddhtvckp litreqrfye
       61 slppemkeft peykgvvsvc fegdsdgyin lvaypyvene aleqddlper dqprrkhsrr
      121 slhrsssgte hkeekpglas dstessiqet ksprvdlhih sdvpfqmldg nsglssekis
      181 ynpwslrchk qqlsrmrses kdrklykfll lenvvhhfkl pcvldlkmgt rqhgddasee
      241 kaarqmkkce qstsatlgvr vcgmqvyqld tghylcrnky ygrglsiegf rnalyqylhn
      301 gielrkdlfe pvlaklrslk avlerqasyr fyssslliiy dgkdsragtl lerrpearlk
      361 rvegsvpegl qdgggsepgs saqpkvdvrm idfahstfkg frddptvhdg pdmgyvfgle
      421 slinimeqmr eenq
//
LOCUS       XP_041317507             434 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317507
VERSION     XP_041317507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="inositol hexakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=49332
     Region          208..427
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..434
                     /gene="IP6K1"
                     /coded_by="XM_041461573.1:416..1720"
                     /db_xref="GeneID:121350315"
ORIGIN      
        1 mcvcqtmevg kygknatrsg drgvllepfi hqvgghssmm ryddhtvckp litreqrfye
       61 slppemkeft peykgvvsvc fegdsdgyin lvaypyvene aleqddlper dqprrkhsrr
      121 slhrsssgte hkeekpglas dstessiqet ksprvdlhih sdvpfqmldg nsglssekis
      181 ynpwslrchk qqlsrmrses kdrklykfll lenvvhhfkl pcvldlkmgt rqhgddasee
      241 kaarqmkkce qstsatlgvr vcgmqvyqld tghylcrnky ygrglsiegf rnalyqylhn
      301 gielrkdlfe pvlaklrslk avlerqasyr fyssslliiy dgkdsragtl lerrpearlk
      361 rvegsvpegl qdgggsepgs saqpkvdvrm idfahstfkg frddptvhdg pdmgyvfgle
      421 slinimeqmr eenq
//
LOCUS       XP_041317516             434 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317516
VERSION     XP_041317516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="inositol hexakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=49332
     Region          208..427
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..434
                     /gene="IP6K1"
                     /coded_by="XM_041461582.1:357..1661"
                     /db_xref="GeneID:121350315"
ORIGIN      
        1 mcvcqtmevg kygknatrsg drgvllepfi hqvgghssmm ryddhtvckp litreqrfye
       61 slppemkeft peykgvvsvc fegdsdgyin lvaypyvene aleqddlper dqprrkhsrr
      121 slhrsssgte hkeekpglas dstessiqet ksprvdlhih sdvpfqmldg nsglssekis
      181 ynpwslrchk qqlsrmrses kdrklykfll lenvvhhfkl pcvldlkmgt rqhgddasee
      241 kaarqmkkce qstsatlgvr vcgmqvyqld tghylcrnky ygrglsiegf rnalyqylhn
      301 gielrkdlfe pvlaklrslk avlerqasyr fyssslliiy dgkdsragtl lerrpearlk
      361 rvegsvpegl qdgggsepgs saqpkvdvrm idfahstfkg frddptvhdg pdmgyvfgle
      421 slinimeqmr eenq
//
LOCUS       XP_041317526             434 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317526
VERSION     XP_041317526.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461592.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="inositol hexakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=49332
     Region          208..427
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..434
                     /gene="IP6K1"
                     /coded_by="XM_041461592.1:295..1599"
                     /db_xref="GeneID:121350315"
ORIGIN      
        1 mcvcqtmevg kygknatrsg drgvllepfi hqvgghssmm ryddhtvckp litreqrfye
       61 slppemkeft peykgvvsvc fegdsdgyin lvaypyvene aleqddlper dqprrkhsrr
      121 slhrsssgte hkeekpglas dstessiqet ksprvdlhih sdvpfqmldg nsglssekis
      181 ynpwslrchk qqlsrmrses kdrklykfll lenvvhhfkl pcvldlkmgt rqhgddasee
      241 kaarqmkkce qstsatlgvr vcgmqvyqld tghylcrnky ygrglsiegf rnalyqylhn
      301 gielrkdlfe pvlaklrslk avlerqasyr fyssslliiy dgkdsragtl lerrpearlk
      361 rvegsvpegl qdgggsepgs saqpkvdvrm idfahstfkg frddptvhdg pdmgyvfgle
      421 slinimeqmr eenq
//
LOCUS       XP_041317535             434 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317535
VERSION     XP_041317535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="inositol hexakisphosphate kinase 1 isoform X1"
                     /calculated_mol_wt=49332
     Region          208..427
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..434
                     /gene="IP6K1"
                     /coded_by="XM_041461601.1:411..1715"
                     /db_xref="GeneID:121350315"
ORIGIN      
        1 mcvcqtmevg kygknatrsg drgvllepfi hqvgghssmm ryddhtvckp litreqrfye
       61 slppemkeft peykgvvsvc fegdsdgyin lvaypyvene aleqddlper dqprrkhsrr
      121 slhrsssgte hkeekpglas dstessiqet ksprvdlhih sdvpfqmldg nsglssekis
      181 ynpwslrchk qqlsrmrses kdrklykfll lenvvhhfkl pcvldlkmgt rqhgddasee
      241 kaarqmkkce qstsatlgvr vcgmqvyqld tghylcrnky ygrglsiegf rnalyqylhn
      301 gielrkdlfe pvlaklrslk avlerqasyr fyssslliiy dgkdsragtl lerrpearlk
      361 rvegsvpegl qdgggsepgs saqpkvdvrm idfahstfkg frddptvhdg pdmgyvfgle
      421 slinimeqmr eenq
//
LOCUS       XP_041317542             433 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317542
VERSION     XP_041317542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..433
                     /product="inositol hexakisphosphate kinase 1 isoform X2"
                     /calculated_mol_wt=49245
     Region          207..426
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..433
                     /gene="IP6K1"
                     /coded_by="XM_041461608.1:395..1696"
                     /db_xref="GeneID:121350315"
ORIGIN      
        1 mcvcqtmevg kygknatrsg drgvllepfi hqvgghssmm ryddhtvckp litreqrfye
       61 slppemkeft peykgvvsvc fegdsdgyin lvaypyvene aleqddlper dqprrkhsrr
      121 slhrsssgte hkeekpglas dstesiqetk sprvdlhihs dvpfqmldgn sglssekisy
      181 npwslrchkq qlsrmrsesk drklykflll envvhhfklp cvldlkmgtr qhgddaseek
      241 aarqmkkceq stsatlgvrv cgmqvyqldt ghylcrnkyy grglsiegfr nalyqylhng
      301 ielrkdlfep vlaklrslka vlerqasyrf yssslliiyd gkdsragtll errpearlkr
      361 vegsvpeglq dgggsepgss aqpkvdvrmi dfahstfkgf rddptvhdgp dmgyvfgles
      421 linimeqmre enq
//
LOCUS       XP_041317554            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF123 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317554
VERSION     XP_041317554.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461620.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="E3 ubiquitin-protein ligase RNF123 isoform X1"
                     /calculated_mol_wt=148843
     Region          124..251
                     /region_name="SPRY_RNF123"
                     /note="SPRY domain at N-terminus of ring finger protein
                     123; cd12882"
                     /db_xref="CDD:293940"
     Region          1262..1305
                     /region_name="RING-HC_RNF123"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 123 (RNF123) and similar proteins; cd16541"
                     /db_xref="CDD:438203"
     CDS             1..1317
                     /gene="RNF123"
                     /coded_by="XM_041461620.1:254..4207"
                     /db_xref="GeneID:121350345"
ORIGIN      
        1 mtsrgagtaf srknyrlste pekskvtgiv nsrllndylh rvftsadgnq paaayrkhlt
       61 fqnlqehler llaeengsee srdqvaegrl gpstvvldht sgfeglllvd ddllgvighs
      121 nfgsirattc vykgkwiyev lissqglmqi gwctlncrfn qeegvgdtpd syaydgnrvr
      181 kwnvtttnyg kswaagdivs clidldegti afclngislg tafdnitrga gmayfpaisl
      241 sfkesvafnf gsrplrypve gyrplqdppv adlvkarkll gylknvihig idvtegklve
      301 kdtsmwqlqg eptvlitlah ifnyfsplmc kvylvedvlm tfllsilerg gaveahpliq
      361 qlldlmwllm eeyevheclk qllmsllray rfspiipdlg lqihylrlti avlkheksrk
      421 yllsnvlfdv lrsvvffyik splrveeagl qelipttwwp nrftkegkes kevkeesaee
      481 rlrrrayerg cqrlkkriev veglqvqilk lllnnkdrgg geasryifln kfrkflqena
      541 snrgnlavlc ppeymvcflh rliaalryfw dghkaktpas lsseeayvpp qlfyngkvdy
      601 fdlqrlggll shlkktlkdd laakanilid paelqavtmd dldedeesat saaqsqrpsa
      661 alaiggalar pawlssptlg ranrflstaa vslmnprrpl galekikvlt lraeqrtred
      721 iegthgndgl llgrppeepd qpitenslle vldgivmmyn lsvhqqlgkm vgvsddvney
      781 amalkdteek isrcpkrrrd iheellksqk vfseklnhls rrlawinvti yskekmqdiy
      841 wllrvcirti ehgdrtgslf afmpefylsv amnsysalkn yfspvnsmee lpgyeetlmr
      901 laailakhfa dsrivgtdir dslmqalasy vcyphslrav eripeeqris mmknllapye
      961 qrpwaqtnwi lvrlwrgcgf gyrytrlphl lktkpedasl pslqrdlsva sfqkpcpstl
     1021 lqrhmadllr sdrdlapsfl nsvlnqlnwa fsefigmiqe iqqaaerler nfvdsrqlkv
     1081 catcfdlsvs llrvlemtvt lapeifldwn rpsselllrr laqllnqvln rvtaernlfd
     1141 rvvnlrlpgl esvdhypilv avtgilvrll vdtdvqgter atavlladpc fqlrsiqyll
     1201 ghaepsalaa aapatdkrhf slhtyteyis teelakvekm lnhlseeskq aaattlptse
     1261 edlcpicyah pisaifrpcs hksckacinq hlmnnkdcff ckatitgvdd ftkpass
//
LOCUS       XP_041317561            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF123 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317561
VERSION     XP_041317561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="E3 ubiquitin-protein ligase RNF123 isoform X1"
                     /calculated_mol_wt=148843
     Region          124..251
                     /region_name="SPRY_RNF123"
                     /note="SPRY domain at N-terminus of ring finger protein
                     123; cd12882"
                     /db_xref="CDD:293940"
     Region          1262..1305
                     /region_name="RING-HC_RNF123"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 123 (RNF123) and similar proteins; cd16541"
                     /db_xref="CDD:438203"
     CDS             1..1317
                     /gene="RNF123"
                     /coded_by="XM_041461627.1:204..4157"
                     /db_xref="GeneID:121350345"
ORIGIN      
        1 mtsrgagtaf srknyrlste pekskvtgiv nsrllndylh rvftsadgnq paaayrkhlt
       61 fqnlqehler llaeengsee srdqvaegrl gpstvvldht sgfeglllvd ddllgvighs
      121 nfgsirattc vykgkwiyev lissqglmqi gwctlncrfn qeegvgdtpd syaydgnrvr
      181 kwnvtttnyg kswaagdivs clidldegti afclngislg tafdnitrga gmayfpaisl
      241 sfkesvafnf gsrplrypve gyrplqdppv adlvkarkll gylknvihig idvtegklve
      301 kdtsmwqlqg eptvlitlah ifnyfsplmc kvylvedvlm tfllsilerg gaveahpliq
      361 qlldlmwllm eeyevheclk qllmsllray rfspiipdlg lqihylrlti avlkheksrk
      421 yllsnvlfdv lrsvvffyik splrveeagl qelipttwwp nrftkegkes kevkeesaee
      481 rlrrrayerg cqrlkkriev veglqvqilk lllnnkdrgg geasryifln kfrkflqena
      541 snrgnlavlc ppeymvcflh rliaalryfw dghkaktpas lsseeayvpp qlfyngkvdy
      601 fdlqrlggll shlkktlkdd laakanilid paelqavtmd dldedeesat saaqsqrpsa
      661 alaiggalar pawlssptlg ranrflstaa vslmnprrpl galekikvlt lraeqrtred
      721 iegthgndgl llgrppeepd qpitenslle vldgivmmyn lsvhqqlgkm vgvsddvney
      781 amalkdteek isrcpkrrrd iheellksqk vfseklnhls rrlawinvti yskekmqdiy
      841 wllrvcirti ehgdrtgslf afmpefylsv amnsysalkn yfspvnsmee lpgyeetlmr
      901 laailakhfa dsrivgtdir dslmqalasy vcyphslrav eripeeqris mmknllapye
      961 qrpwaqtnwi lvrlwrgcgf gyrytrlphl lktkpedasl pslqrdlsva sfqkpcpstl
     1021 lqrhmadllr sdrdlapsfl nsvlnqlnwa fsefigmiqe iqqaaerler nfvdsrqlkv
     1081 catcfdlsvs llrvlemtvt lapeifldwn rpsselllrr laqllnqvln rvtaernlfd
     1141 rvvnlrlpgl esvdhypilv avtgilvrll vdtdvqgter atavlladpc fqlrsiqyll
     1201 ghaepsalaa aapatdkrhf slhtyteyis teelakvekm lnhlseeskq aaattlptse
     1261 edlcpicyah pisaifrpcs hksckacinq hlmnnkdcff ckatitgvdd ftkpass
//
LOCUS       XP_041317568            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF123 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317568
VERSION     XP_041317568.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461634.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="E3 ubiquitin-protein ligase RNF123 isoform X1"
                     /calculated_mol_wt=148843
     Region          124..251
                     /region_name="SPRY_RNF123"
                     /note="SPRY domain at N-terminus of ring finger protein
                     123; cd12882"
                     /db_xref="CDD:293940"
     Region          1262..1305
                     /region_name="RING-HC_RNF123"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 123 (RNF123) and similar proteins; cd16541"
                     /db_xref="CDD:438203"
     CDS             1..1317
                     /gene="RNF123"
                     /coded_by="XM_041461634.1:260..4213"
                     /db_xref="GeneID:121350345"
ORIGIN      
        1 mtsrgagtaf srknyrlste pekskvtgiv nsrllndylh rvftsadgnq paaayrkhlt
       61 fqnlqehler llaeengsee srdqvaegrl gpstvvldht sgfeglllvd ddllgvighs
      121 nfgsirattc vykgkwiyev lissqglmqi gwctlncrfn qeegvgdtpd syaydgnrvr
      181 kwnvtttnyg kswaagdivs clidldegti afclngislg tafdnitrga gmayfpaisl
      241 sfkesvafnf gsrplrypve gyrplqdppv adlvkarkll gylknvihig idvtegklve
      301 kdtsmwqlqg eptvlitlah ifnyfsplmc kvylvedvlm tfllsilerg gaveahpliq
      361 qlldlmwllm eeyevheclk qllmsllray rfspiipdlg lqihylrlti avlkheksrk
      421 yllsnvlfdv lrsvvffyik splrveeagl qelipttwwp nrftkegkes kevkeesaee
      481 rlrrrayerg cqrlkkriev veglqvqilk lllnnkdrgg geasryifln kfrkflqena
      541 snrgnlavlc ppeymvcflh rliaalryfw dghkaktpas lsseeayvpp qlfyngkvdy
      601 fdlqrlggll shlkktlkdd laakanilid paelqavtmd dldedeesat saaqsqrpsa
      661 alaiggalar pawlssptlg ranrflstaa vslmnprrpl galekikvlt lraeqrtred
      721 iegthgndgl llgrppeepd qpitenslle vldgivmmyn lsvhqqlgkm vgvsddvney
      781 amalkdteek isrcpkrrrd iheellksqk vfseklnhls rrlawinvti yskekmqdiy
      841 wllrvcirti ehgdrtgslf afmpefylsv amnsysalkn yfspvnsmee lpgyeetlmr
      901 laailakhfa dsrivgtdir dslmqalasy vcyphslrav eripeeqris mmknllapye
      961 qrpwaqtnwi lvrlwrgcgf gyrytrlphl lktkpedasl pslqrdlsva sfqkpcpstl
     1021 lqrhmadllr sdrdlapsfl nsvlnqlnwa fsefigmiqe iqqaaerler nfvdsrqlkv
     1081 catcfdlsvs llrvlemtvt lapeifldwn rpsselllrr laqllnqvln rvtaernlfd
     1141 rvvnlrlpgl esvdhypilv avtgilvrll vdtdvqgter atavlladpc fqlrsiqyll
     1201 ghaepsalaa aapatdkrhf slhtyteyis teelakvekm lnhlseeskq aaattlptse
     1261 edlcpicyah pisaifrpcs hksckacinq hlmnnkdcff ckatitgvdd ftkpass
//
LOCUS       XP_041317577            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF123 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317577
VERSION     XP_041317577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461643.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="E3 ubiquitin-protein ligase RNF123 isoform X1"
                     /calculated_mol_wt=148843
     Region          124..251
                     /region_name="SPRY_RNF123"
                     /note="SPRY domain at N-terminus of ring finger protein
                     123; cd12882"
                     /db_xref="CDD:293940"
     Region          1262..1305
                     /region_name="RING-HC_RNF123"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 123 (RNF123) and similar proteins; cd16541"
                     /db_xref="CDD:438203"
     CDS             1..1317
                     /gene="RNF123"
                     /coded_by="XM_041461643.1:133..4086"
                     /db_xref="GeneID:121350345"
ORIGIN      
        1 mtsrgagtaf srknyrlste pekskvtgiv nsrllndylh rvftsadgnq paaayrkhlt
       61 fqnlqehler llaeengsee srdqvaegrl gpstvvldht sgfeglllvd ddllgvighs
      121 nfgsirattc vykgkwiyev lissqglmqi gwctlncrfn qeegvgdtpd syaydgnrvr
      181 kwnvtttnyg kswaagdivs clidldegti afclngislg tafdnitrga gmayfpaisl
      241 sfkesvafnf gsrplrypve gyrplqdppv adlvkarkll gylknvihig idvtegklve
      301 kdtsmwqlqg eptvlitlah ifnyfsplmc kvylvedvlm tfllsilerg gaveahpliq
      361 qlldlmwllm eeyevheclk qllmsllray rfspiipdlg lqihylrlti avlkheksrk
      421 yllsnvlfdv lrsvvffyik splrveeagl qelipttwwp nrftkegkes kevkeesaee
      481 rlrrrayerg cqrlkkriev veglqvqilk lllnnkdrgg geasryifln kfrkflqena
      541 snrgnlavlc ppeymvcflh rliaalryfw dghkaktpas lsseeayvpp qlfyngkvdy
      601 fdlqrlggll shlkktlkdd laakanilid paelqavtmd dldedeesat saaqsqrpsa
      661 alaiggalar pawlssptlg ranrflstaa vslmnprrpl galekikvlt lraeqrtred
      721 iegthgndgl llgrppeepd qpitenslle vldgivmmyn lsvhqqlgkm vgvsddvney
      781 amalkdteek isrcpkrrrd iheellksqk vfseklnhls rrlawinvti yskekmqdiy
      841 wllrvcirti ehgdrtgslf afmpefylsv amnsysalkn yfspvnsmee lpgyeetlmr
      901 laailakhfa dsrivgtdir dslmqalasy vcyphslrav eripeeqris mmknllapye
      961 qrpwaqtnwi lvrlwrgcgf gyrytrlphl lktkpedasl pslqrdlsva sfqkpcpstl
     1021 lqrhmadllr sdrdlapsfl nsvlnqlnwa fsefigmiqe iqqaaerler nfvdsrqlkv
     1081 catcfdlsvs llrvlemtvt lapeifldwn rpsselllrr laqllnqvln rvtaernlfd
     1141 rvvnlrlpgl esvdhypilv avtgilvrll vdtdvqgter atavlladpc fqlrsiqyll
     1201 ghaepsalaa aapatdkrhf slhtyteyis teelakvekm lnhlseeskq aaattlptse
     1261 edlcpicyah pisaifrpcs hksckacinq hlmnnkdcff ckatitgvdd ftkpass
//
LOCUS       XP_041317585            1308 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF123 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317585
VERSION     XP_041317585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1308
                     /product="E3 ubiquitin-protein ligase RNF123 isoform X2"
                     /calculated_mol_wt=147839
     Region          124..251
                     /region_name="SPRY_RNF123"
                     /note="SPRY domain at N-terminus of ring finger protein
                     123; cd12882"
                     /db_xref="CDD:293940"
     Region          1253..1296
                     /region_name="RING-HC_RNF123"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 123 (RNF123) and similar proteins; cd16541"
                     /db_xref="CDD:438203"
     CDS             1..1308
                     /gene="RNF123"
                     /coded_by="XM_041461651.1:204..4130"
                     /db_xref="GeneID:121350345"
ORIGIN      
        1 mtsrgagtaf srknyrlste pekskvtgiv nsrllndylh rvftsadgnq paaayrkhlt
       61 fqnlqehler llaeengsee srdqvaegrl gpstvvldht sgfeglllvd ddllgvighs
      121 nfgsirattc vykgkwiyev lissqglmqi gwctlncrfn qeegvgdtpd syaydgnrvr
      181 kwnvtttnyg kswaagdivs clidldegti afclngislg tafdnitrga gmayfpaisl
      241 sfkesvafnf gsrplrypve gyrplqdppv adlvkarkll gylknvihig idvtegklve
      301 kdtsmwqlqg eptvlitlah ifnyfsplmc kvylvedvlm tfllsilerg gaveahpliq
      361 qlldlmwllm eeyevheclk qllmsllray rfspiipdlg lqihylrlti avlkheksrk
      421 yllsnvlfdv lrsvvffyik splrveeagl qelipttwwp nrftkegkes kevkeesaee
      481 rlrrrayerg cqrlkkriev veglqvqilk lllnnkdrgg geasryifln kfrkflqena
      541 snrgnlavlc ppeymvcflh rliaalryfw dghkaktpas lsseeayvpp qlfyngkvdy
      601 fdlqrlggll shlkktlkdd laakanilid paelqavtmd dldedeesat saaqsqrpsa
      661 alaiggalar pawlssptlg ranrflstaa vslmnprrpl galekikvlt lraeqrtred
      721 iegthgndgl llgrppeepd qpitenslle vldgivmmyn lsvhqqlgkm vgvsddvney
      781 amalkdteek isrcpkrrrd iheellksqk vfseklnhls rrlawinvti yskekmqdiy
      841 wllrvcirti ehgdrtgslf afmpefylsv amnsysalkn yfspvnsmee lpgyeetlmr
      901 laailakhfa dsrivgtdir dslmqalasy vcyphslrav eripeeqris mmknllapye
      961 qrpwaqtnwi lvrlwrgcgf gyrytrlphl lktkpedasl pslqkpcpst llqrhmadll
     1021 rsdrdlapsf lnsvlnqlnw afsefigmiq eiqqaaerle rnfvdsrqlk vcatcfdlsv
     1081 sllrvlemtv tlapeifldw nrpsselllr rlaqllnqvl nrvtaernlf drvvnlrlpg
     1141 lesvdhypil vavtgilvrl lvdtdvqgte ratavlladp cfqlrsiqyl lghaepsala
     1201 aaapatdkrh fslhtyteyi steelakvek mlnhlseesk qaaattlpts eedlcpicya
     1261 hpisaifrpc shksckacin qhlmnnkdcf fckatitgvd dftkpass
//
LOCUS       XP_041317596             512 aa            linear   VRT 06-MAY-2021
DEFINITION  amphoterin-induced protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041317596
VERSION     XP_041317596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..512
                     /product="amphoterin-induced protein 3"
                     /calculated_mol_wt=56879
     Region          51..68
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          69..92
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <70..>179
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          93..116
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          290..380
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          300..304
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          317..321
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          344..348
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          358..363
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..512
                     /gene="AMIGO3"
                     /coded_by="XM_041461662.1:1469..3007"
                     /db_xref="GeneID:121350377"
ORIGIN      
        1 msspatadsv wprvakllll llllwlllya praspqpqrc pdacictsdl lscsrqmlqr
       61 vpralppttt tldlshnalt qlhdhwlaal phlealhish nqirdlspra fhnasflrhl
      121 dmssnhlqav erhyfealvs leelllydnh ikrvdenafa klsdlrkvyl swnnlttfpf
      181 havqglgihk lrtldlssns lssipvevla alpenigngl ylhnnpircs cplylmlqrw
      241 nqrgfssvkd fseehtckvs dnaprslikf lkhrdmfenc sastedahls rlevvvgqpv
      301 lltcntsnts lphaataymw itphhepikh pgnsnrslev yrngslriaa akpwlsgvyv
      361 glamnspynf srmcefnvtv lypkaagetf stglttllgc ivslvlviiy lyltpcrclg
      421 cckkpaplsp pqecsaqssi lsttppatdg pnrkasankh vvflepiret qngkirlalg
      481 edfpdpkhpk vlqlksdses issvfsdtpi vs
//
LOCUS       XP_041317607             360 aa            linear   VRT 06-MAY-2021
DEFINITION  mannose-1-phosphate guanyltransferase beta [Pyrgilauda ruficollis].
ACCESSION   XP_041317607
VERSION     XP_041317607.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461673.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..360
                     /product="mannose-1-phosphate guanyltransferase beta"
                     /calculated_mol_wt=39385
     Region          1..233
                     /region_name="M1P_guanylylT_B_like_N"
                     /note="N-terminal domain of the M1P-guanylyltransferase
                     B-isoform like proteins; cd06425"
                     /db_xref="CDD:133047"
     Site            order(6..9,23,108..110,172)
                     /site_type="active"
                     /note="probable substrate binding site [active]"
                     /db_xref="CDD:133047"
     Site            order(110,218,220)
                     /site_type="active"
                     /note="metal binding site [active]"
                     /db_xref="CDD:133047"
     Region          255..334
                     /region_name="LbetaH"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; cl00160"
                     /db_xref="CDD:469633"
     Site            order(267,269,273,275,285,290,292,302,306..307,309,319,
                     325,327,329)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:100062"
     Site            order(302,304..305,309,321,329)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:100062"
     CDS             1..360
                     /gene="GMPPB"
                     /coded_by="XM_041461673.1:41..1123"
                     /db_xref="GeneID:121350385"
ORIGIN      
        1 mralilvggf gtrlrpltls rpkplvefcn kavllhqlea lrqagvshvv lavsymsdal
       61 eaamreqeqr lgirismshe keplgtagpl alardllaed gepffvlnsd vicefpfaal
      121 arfhrqhgge gslvvtrvee pakygvvvce adtgricrfv ekprvfvsnk inaglyifnp
      181 gilqriqlrp tsiekeifpa maqdgqlyam elqgfwmdig qpkdfltgmc mylqalraqh
      241 peklhsgpgv vgnvlvdpsa kigancvigp nvtigagvvv edgvrikrct vlegarirsh
      301 swlescivgw scsvgqwvrm envtvlgedv ivndelylng anvlphksia esvpepriim
//
LOCUS       XP_041317619            1057 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase PDZRN3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317619
VERSION     XP_041317619.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461685.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1057
                     /product="E3 ubiquitin-protein ligase PDZRN3 isoform X1"
                     /calculated_mol_wt=118582
     Region          12..58
                     /region_name="RING-HC_LNX3"
                     /note="RING finger, HC subclass, found in ligand of numb
                     protein X 3 (LNX3); cd16718"
                     /db_xref="CDD:438378"
     Site            order(18,21,33,35,38,41,52,56)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438378"
     Region          68..>131
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     Region          244..335
                     /region_name="PDZ1-PDZRN4-like"
                     /note="PDZ domain 1 of PDZ domain-containing RING finger
                     protein 4 (PDZRN4), PDZRN3-B, and related domains;
                     cd06715"
                     /db_xref="CDD:467199"
     Site            order(256..262,282,285,315,319,322..323)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467199"
     Region          411..499
                     /region_name="PDZ2-PDZRN4-like"
                     /note="PDZ domain 2 of PDZ domain-containing RING finger
                     protein 4 (PDZRN4), PDZRN3-B, and related domains;
                     cd06716"
                     /db_xref="CDD:467200"
     Site            order(426..432,446,449,477,481,484..485)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467200"
     CDS             1..1057
                     /gene="PDZRN3"
                     /coded_by="XM_041461685.1:148..3321"
                     /db_xref="GeneID:121350392"
ORIGIN      
        1 mgfeldrfsg evdpdfkcnl cnkvledplt tpcghvfcag cvlpwvvqqg scpvncqris
       61 tkelnhvlpl kslilkldik cdnhargcea vvplqhlgeh aetcdfspak crnrgcrqvl
      121 nlrdveahmr ercearpagl ceqgcglvlt hgerragghg clralrahga alqaraaale
      181 kalkkealra gkreqsllsr laaaqlelqv talryqkrft qysarldala raraaspgkg
      241 eetkaltlvl hrdsgslgfn iiggrpcvdn qdgsssegif vskivdtgpa akegglqihd
      301 riievngkdl skatheqave afktakepiv vqvlrrapra kahepqlvdv gtqtditfeh
      361 imalskmgsp tppvpgldpy llpedhpsvh eyydpndymg gihqemdrde leleevdlhr
      421 vnsqdklglt vcyrtddedd mgiyvseidp nsiaakdgrl regdriiqin gievqnreea
      481 vallsseesk nisllvarpe iqldegwmdd drndflddlh mdmleeqhhq amqftasmlq
      541 qkkheedggt tdtatilsnq hekdsgvgrt ddstrndess eqenngddht tssntlgsqk
      601 kltyshdtlg sgdmqfsnes fisadctdvd flgipvdece rfrellelkc qvksanpysl
      661 yyhnsslems ksdqesvdre lemlneelrn ieleclnivr ahkmqqlkeq crepwmlhns
      721 gfrnyntsid vrrhelsdit elpeksdkds ssayntgesc rstpltleis pdnslrrtae
      781 gvscqgnega aaynvsqknl fagseshess agkchasakd pdpgkqlesk erkgsdgsks
      841 pthgqkpsgs yvspyhhspy khahipahaq hyqsymqliq qksaveyaqs qmslvsmckd
      901 lasgqseprm ewkvkvrsdg tryitkrpvr drllreraik ikeersgmtt dddaisemkm
      961 grywskeerk qhlvkakeqr rrrefmmqsr leclkeqqga eekkemniie lshkkmmkkr
     1021 nkkifdnwmt iqellthgtk spdgtrvyns flsvttv
//
LOCUS       XP_041317627             776 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase PDZRN3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317627
VERSION     XP_041317627.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461693.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="E3 ubiquitin-protein ligase PDZRN3 isoform X2"
                     /calculated_mol_wt=88243
     Region          <23..54
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Region          130..218
                     /region_name="PDZ2-PDZRN4-like"
                     /note="PDZ domain 2 of PDZ domain-containing RING finger
                     protein 4 (PDZRN4), PDZRN3-B, and related domains;
                     cd06716"
                     /db_xref="CDD:467200"
     Site            order(145..151,165,168,196,200,203..204)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467200"
     CDS             1..776
                     /gene="PDZRN3"
                     /coded_by="XM_041461693.1:308..2638"
                     /db_xref="GeneID:121350392"
ORIGIN      
        1 mgcslcalqk peeqykllye vcqvngkdls katheqavea fktakepivv qvlrraprak
       61 ahepqlvdvg tqtditfehi malskmgspt ppvpgldpyl lpedhpsvhe yydpndymgg
      121 ihqemdrdel eleevdlhrv nsqdklgltv cyrtddeddm giyvseidpn siaakdgrlr
      181 egdriiqing ievqnreeav allsseeskn isllvarpei qldegwmddd rndflddlhm
      241 dmleeqhhqa mqftasmlqq kkheedggtt dtatilsnqh ekdsgvgrtd dstrndesse
      301 qenngddhtt ssntlgsqkk ltyshdtlgs gdmqfsnesf isadctdvdf lgipvdecer
      361 frellelkcq vksanpysly yhnsslemsk sdqesvdrel emlneelrni eleclnivra
      421 hkmqqlkeqc repwmlhnsg frnyntsidv rrhelsdite lpeksdkdss sayntgescr
      481 stpltleisp dnslrrtaeg vscqgnegaa aynvsqknlf agseshessa gkchasakdp
      541 dpgkqleske rkgsdgsksp thgqkpsgsy vspyhhspyk hahipahaqh yqsymqliqq
      601 ksaveyaqsq mslvsmckdl asgqseprme wkvkvrsdgt ryitkrpvrd rllreraiki
      661 keersgmttd ddaisemkmg rywskeerkq hlvkakeqrr rrefmmqsrl eclkeqqgae
      721 ekkemniiel shkkmmkkrn kkifdnwmti qellthgtks pdgtrvynsf lsvttv
//
LOCUS       XP_041317632             776 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase PDZRN3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317632
VERSION     XP_041317632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="E3 ubiquitin-protein ligase PDZRN3 isoform X2"
                     /calculated_mol_wt=88243
     Region          <23..54
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Region          130..218
                     /region_name="PDZ2-PDZRN4-like"
                     /note="PDZ domain 2 of PDZ domain-containing RING finger
                     protein 4 (PDZRN4), PDZRN3-B, and related domains;
                     cd06716"
                     /db_xref="CDD:467200"
     Site            order(145..151,165,168,196,200,203..204)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467200"
     CDS             1..776
                     /gene="PDZRN3"
                     /coded_by="XM_041461698.1:150..2480"
                     /db_xref="GeneID:121350392"
ORIGIN      
        1 mgcslcalqk peeqykllye vcqvngkdls katheqavea fktakepivv qvlrraprak
       61 ahepqlvdvg tqtditfehi malskmgspt ppvpgldpyl lpedhpsvhe yydpndymgg
      121 ihqemdrdel eleevdlhrv nsqdklgltv cyrtddeddm giyvseidpn siaakdgrlr
      181 egdriiqing ievqnreeav allsseeskn isllvarpei qldegwmddd rndflddlhm
      241 dmleeqhhqa mqftasmlqq kkheedggtt dtatilsnqh ekdsgvgrtd dstrndesse
      301 qenngddhtt ssntlgsqkk ltyshdtlgs gdmqfsnesf isadctdvdf lgipvdecer
      361 frellelkcq vksanpysly yhnsslemsk sdqesvdrel emlneelrni eleclnivra
      421 hkmqqlkeqc repwmlhnsg frnyntsidv rrhelsdite lpeksdkdss sayntgescr
      481 stpltleisp dnslrrtaeg vscqgnegaa aynvsqknlf agseshessa gkchasakdp
      541 dpgkqleske rkgsdgsksp thgqkpsgsy vspyhhspyk hahipahaqh yqsymqliqq
      601 ksaveyaqsq mslvsmckdl asgqseprme wkvkvrsdgt ryitkrpvrd rllreraiki
      661 keersgmttd ddaisemkmg rywskeerkq hlvkakeqrr rrefmmqsrl eclkeqqgae
      721 ekkemniiel shkkmmkkrn kkifdnwmti qellthgtks pdgtrvynsf lsvttv
//
LOCUS       XP_041317646             486 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317646
VERSION     XP_041317646.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461712.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="solute carrier family 41 member 3 isoform X1"
                     /calculated_mol_wt=51920
     Region          113..247
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          326..470
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..486
                     /gene="SLC41A3"
                     /coded_by="XM_041461712.1:926..2386"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mvvtqlqlel cfhgkklrgf tckltrsasg flpetsfsia sqifvpflla glgmvaagll
       61 mdvvqgslaa gpsgfwagwh cwrpcralpv fgplfdskhw dvfrtitevf ilvpalvglk
      121 gnlemtlasr lstaantgqm ddaqkqwkma tcnlaliqvq atvvgllaav aavilgaisk
      181 gsvelsqaav lcassvttaf iaalslglvm igviigarkv ginpdnvatp iaaslgdlit
      241 lsllagisst lfkyidvkyl splicavfiv miplwvaiak qspslaevlk sgwqpvivam
      301 sissigglil dktvtdpnfe gmavftpvin gvggnlvaiq asristflhf wsmpgvlpyk
      361 mrqnwpnpct tffssgvnsk sarvlfllvi pghlvflyti hllqgghtsl sftfvmfyla
      421 aallqvgill yvadlivrlm wrkaldpdnf sipyltalgd llgtgflaic frlvwlihgt
      481 dmnlgn
//
LOCUS       XP_041317657             486 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317657
VERSION     XP_041317657.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461723.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="solute carrier family 41 member 3 isoform X1"
                     /calculated_mol_wt=51920
     Region          113..247
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          326..470
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..486
                     /gene="SLC41A3"
                     /coded_by="XM_041461723.1:567..2027"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mvvtqlqlel cfhgkklrgf tckltrsasg flpetsfsia sqifvpflla glgmvaagll
       61 mdvvqgslaa gpsgfwagwh cwrpcralpv fgplfdskhw dvfrtitevf ilvpalvglk
      121 gnlemtlasr lstaantgqm ddaqkqwkma tcnlaliqvq atvvgllaav aavilgaisk
      181 gsvelsqaav lcassvttaf iaalslglvm igviigarkv ginpdnvatp iaaslgdlit
      241 lsllagisst lfkyidvkyl splicavfiv miplwvaiak qspslaevlk sgwqpvivam
      301 sissigglil dktvtdpnfe gmavftpvin gvggnlvaiq asristflhf wsmpgvlpyk
      361 mrqnwpnpct tffssgvnsk sarvlfllvi pghlvflyti hllqgghtsl sftfvmfyla
      421 aallqvgill yvadlivrlm wrkaldpdnf sipyltalgd llgtgflaic frlvwlihgt
      481 dmnlgn
//
LOCUS       XP_041317667             486 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317667
VERSION     XP_041317667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="solute carrier family 41 member 3 isoform X1"
                     /calculated_mol_wt=51920
     Region          113..247
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          326..470
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..486
                     /gene="SLC41A3"
                     /coded_by="XM_041461733.1:765..2225"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mvvtqlqlel cfhgkklrgf tckltrsasg flpetsfsia sqifvpflla glgmvaagll
       61 mdvvqgslaa gpsgfwagwh cwrpcralpv fgplfdskhw dvfrtitevf ilvpalvglk
      121 gnlemtlasr lstaantgqm ddaqkqwkma tcnlaliqvq atvvgllaav aavilgaisk
      181 gsvelsqaav lcassvttaf iaalslglvm igviigarkv ginpdnvatp iaaslgdlit
      241 lsllagisst lfkyidvkyl splicavfiv miplwvaiak qspslaevlk sgwqpvivam
      301 sissigglil dktvtdpnfe gmavftpvin gvggnlvaiq asristflhf wsmpgvlpyk
      361 mrqnwpnpct tffssgvnsk sarvlfllvi pghlvflyti hllqgghtsl sftfvmfyla
      421 aallqvgill yvadlivrlm wrkaldpdnf sipyltalgd llgtgflaic frlvwlihgt
      481 dmnlgn
//
LOCUS       XP_041317676             485 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317676
VERSION     XP_041317676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="solute carrier family 41 member 3 isoform X2"
                     /calculated_mol_wt=52174
     Region          112..246
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          325..469
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..485
                     /gene="SLC41A3"
                     /coded_by="XM_041461742.1:179..1636"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mkgeevrqrr kegrsrnger arhkgrskgk hresrlgsqe aedvslhaqq kllaeekaam
       61 aksqeesais iclqvllpyl laglgmvlag mvldyvqhwd vfrtitevfi lvpalvglkg
      121 nlemtlasrl staantgqmd daqkqwkmat cnlaliqvqa tvvgllaava avilgaiskg
      181 svelsqaavl cassvttafi aalslglvmi gviigarkvg inpdnvatpi aaslgdlitl
      241 sllagisstl fkyidvkyls plicavfivm iplwvaiakq spslaevlks gwqpvivams
      301 issigglild ktvtdpnfeg mavftpving vggnlvaiqa sristflhfw smpgvlpykm
      361 rqnwpnpctt ffssgvnsks arvlfllvip ghlvflytih llqgghtsls ftfvmfylaa
      421 allqvgilly vadlivrlmw rkaldpdnfs ipyltalgdl lgtgflaicf rlvwlihgtd
      481 mnlgn
//
LOCUS       XP_041317684             453 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317684
VERSION     XP_041317684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="solute carrier family 41 member 3 isoform X3"
                     /calculated_mol_wt=48363
     Region          80..214
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          293..437
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..453
                     /gene="SLC41A3"
                     /coded_by="XM_041461750.1:914..2275"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mvvtqlqlel cfhgkklrgf tckltrsasg flpetsfsia sqifvpflla glgmvaagll
       61 mdvvqhwdvf rtitevfilv palvglkgnl emtlasrlst aantgqmdda qkqwkmatcn
      121 laliqvqatv vgllaavaav ilgaiskgsv elsqaavlca ssvttafiaa lslglvmigv
      181 iigarkvgin pdnvatpiaa slgdlitlsl lagisstlfk yidvkylspl icavfivmip
      241 lwvaiakqsp slaevlksgw qpvivamsis sigglildkt vtdpnfegma vftpvingvg
      301 gnlvaiqasr istflhfwsm pgvlpykmrq nwpnpcttff ssgvnsksar vlfllvipgh
      361 lvflytihll qgghtslsft fvmfylaaal lqvgillyva dlivrlmwrk aldpdnfsip
      421 yltalgdllg tgflaicfrl vwlihgtdmn lgn
//
LOCUS       XP_041317693             437 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317693
VERSION     XP_041317693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461759.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..437
                     /product="solute carrier family 41 member 3 isoform X4"
                     /calculated_mol_wt=46684
     Region          64..198
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          277..421
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..437
                     /gene="SLC41A3"
                     /coded_by="XM_041461759.1:175..1488"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mislayklca swavpegsla agpsgfwagw hcwrpcralp vfgplfdskh wdvfrtitev
       61 filvpalvgl kgnlemtlas rlstaantgq mddaqkqwkm atcnlaliqv qatvvgllaa
      121 vaavilgais kgsvelsqaa vlcassvtta fiaalslglv migviigark vginpdnvat
      181 piaaslgdli tlsllagiss tlfkyidvky lsplicavfi vmiplwvaia kqspslaevl
      241 ksgwqpviva msissiggli ldktvtdpnf egmavftpvi ngvggnlvai qasristflh
      301 fwsmpgvlpy kmrqnwpnpc ttffssgvns ksarvlfllv ipghlvflyt ihllqgghts
      361 lsftfvmfyl aaallqvgil lyvadlivrl mwrkaldpdn fsipyltalg dllgtgflai
      421 cfrlvwlihg tdmnlgn
//
LOCUS       XP_041317701             436 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317701
VERSION     XP_041317701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461767.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="solute carrier family 41 member 3 isoform X5"
                     /calculated_mol_wt=46978
     Region          63..197
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          276..420
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..436
                     /gene="SLC41A3"
                     /coded_by="XM_041461767.1:799..2109"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mrylnskpfs aiprmclvtg rfrnclwrrd akvsfpspts lrcltrslhw dvfrtitevf
       61 ilvpalvglk gnlemtlasr lstaantgqm ddaqkqwkma tcnlaliqvq atvvgllaav
      121 aavilgaisk gsvelsqaav lcassvttaf iaalslglvm igviigarkv ginpdnvatp
      181 iaaslgdlit lsllagisst lfkyidvkyl splicavfiv miplwvaiak qspslaevlk
      241 sgwqpvivam sissigglil dktvtdpnfe gmavftpvin gvggnlvaiq asristflhf
      301 wsmpgvlpyk mrqnwpnpct tffssgvnsk sarvlfllvi pghlvflyti hllqgghtsl
      361 sftfvmfyla aallqvgill yvadlivrlm wrkaldpdnf sipyltalgd llgtgflaic
      421 frlvwlihgt dmnlgn
//
LOCUS       XP_041317710             404 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317710
VERSION     XP_041317710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461776.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="solute carrier family 41 member 3 isoform X6"
                     /calculated_mol_wt=43126
     Region          31..165
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          244..388
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..404
                     /gene="SLC41A3"
                     /coded_by="XM_041461776.1:175..1389"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mislayklca swavpehwdv frtitevfil vpalvglkgn lemtlasrls taantgqmdd
       61 aqkqwkmatc nlaliqvqat vvgllaavaa vilgaiskgs velsqaavlc assvttafia
      121 alslglvmig viigarkvgi npdnvatpia aslgdlitls llagisstlf kyidvkylsp
      181 licavfivmi plwvaiakqs pslaevlksg wqpvivamsi ssigglildk tvtdpnfegm
      241 avftpvingv ggnlvaiqas ristflhfws mpgvlpykmr qnwpnpcttf fssgvnsksa
      301 rvlfllvipg hlvflytihl lqgghtslsf tfvmfylaaa llqvgillyv adlivrlmwr
      361 kaldpdnfsi pyltalgdll gtgflaicfr lvwlihgtdm nlgn
//
LOCUS       XP_041317719             362 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 3 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317719
VERSION     XP_041317719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="solute carrier family 41 member 3 isoform X7"
                     /calculated_mol_wt=38413
     Region          1..123
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          202..346
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..362
                     /gene="SLC41A3"
                     /coded_by="XM_041461785.1:380..1468"
                     /db_xref="GeneID:121350413"
ORIGIN      
        1 mtlasrlsta antgqmddaq kqwkmatcnl aliqvqatvv gllaavaavi lgaiskgsve
       61 lsqaavlcas svttafiaal slglvmigvi igarkvginp dnvatpiaas lgdlitlsll
      121 agisstlfky idvkylspli cavfivmipl wvaiakqsps laevlksgwq pvivamsiss
      181 igglildktv tdpnfegmav ftpvingvgg nlvaiqasri stflhfwsmp gvlpykmrqn
      241 wpnpcttffs sgvnsksarv lfllvipghl vflytihllq gghtslsftf vmfylaaall
      301 qvgillyvad livrlmwrka ldpdnfsipy ltalgdllgt gflaicfrlv wlihgtdmnl
      361 gn
//
LOCUS       XP_041317734             351 aa            linear   VRT 06-MAY-2021
DEFINITION  rhodopsin [Pyrgilauda ruficollis].
ACCESSION   XP_041317734
VERSION     XP_041317734.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461800.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="rhodopsin"
                     /calculated_mol_wt=39210
     Region          3..37
                     /region_name="Rhodopsin_N"
                     /note="Amino terminal of the G-protein receptor rhodopsin;
                     pfam10413"
                     /db_xref="CDD:313611"
     Region          38..317
                     /region_name="7tmA_MWS_opsin"
                     /note="medium wave-sensitive opsins, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15080"
                     /db_xref="CDD:381742"
     Region          39..65
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:381742"
     Site            order(72,135,138..139,141,226,242..243,246,249..250,
                     310..311)
                     /site_type="other"
                     /note="putative G protein interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:381742"
     Region          72..99
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:381742"
     Region          110..140
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:381742"
     Site            order(113,117..118,121..122,187..189,191,207..208,
                     211..212,265,268..269,272,292,296)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:381742"
     Site            order(135,138,141,249..250,310..311)
                     /site_type="other"
                     /note="arrestin binding site [polypeptide binding]"
                     /db_xref="CDD:381742"
     Region          151..173
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:381742"
     Region          200..230
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:381742"
     Region          245..275
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:381742"
     Region          285..310
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:381742"
     CDS             1..351
                     /gene="RHO"
                     /coded_by="XM_041461800.1:100..1155"
                     /db_xref="GeneID:121350447"
ORIGIN      
        1 mngtegqdfy vpmsnktgvv rspfeypqyy laepwkfsal aaymfmlill gfpinfltly
       61 vtiqhkklrt plnyillnla vadlfmvfgg ftttmytsmn gyfvfgvtgc yiegffatlg
      121 geialwslvv laieryvvvc kpmsnfrfge nhaimgvafs wimalacaap plfgwsryip
      181 egmqcscgid yytlkpevnn esfviymfvv hfmiplsiif fcygnlvctv keaaaqqqes
      241 attqkaekev trmviimvis flicwvpyas vafyiftnqg sdfgpifmti paffakssai
      301 ynpviyivmn kqfrncmitt lccgknplgd edtsagktet ssvstsqvsp a
//
LOCUS       XP_041317745             180 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041317745
VERSION     XP_041317745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..180
                     /product="ADP-ribosylation factor 4"
                     /calculated_mol_wt=20411
     Region          1..180
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            24..31
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206717"
     Site            order(26..32,126..127,129,159..161)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206717"
     Site            order(26..27,31,35,47..54,76,81)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206717"
     Site            36..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206717"
     Site            order(48..52,57,67,71,73,77,79..81)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206717"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206717"
     Site            order(49..51,73,80)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206717"
     Site            51..66
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206717"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206717"
     Site            69..86
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206717"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206717"
     Site            159..161
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206717"
     CDS             1..180
                     /gene="ARF4"
                     /coded_by="XM_041461811.1:258..800"
                     /db_xref="GeneID:121350453"
ORIGIN      
        1 mgltisslfs rlfgkkqmri lmvgldaagk ttilyklklg eivttiptig fnvetveykn
       61 icftvwdvgg qdkirplwrh yfqntqglif vvdsndreri qeaaeelqkm lqedelrdav
      121 lllfankqdl pnamaisemt dklglqslrn rtwyvqatca tqgtglyegl dwlsnelskr
//
LOCUS       XP_041317758            1306 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase gamma [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317758
VERSION     XP_041317758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1306
                     /product="receptor-type tyrosine-protein phosphatase
                     gamma"
                     /calculated_mol_wt=145804
     Region          1..203
                     /region_name="alpha_CARP_receptor_like"
                     /note="Carbonic anhydrase alpha related protein,
                     receptor_like subfamily. Carbonic anhydrase related
                     proteins (CARPs) are sequence similar to carbonic
                     anhydrases. Carbonic anhydrases are zinc-containing
                     enzymes that catalyze the reversible hydration of
                     carbon...; cd03122"
                     /db_xref="CDD:239396"
     Region          233..322
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(316..317,319..320)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          709..982
                     /region_name="R-PTPc-G-1"
                     /note="catalytic domain of receptor-type tyrosine-protein
                     phosphatase G, repeat 1; cd17667"
                     /db_xref="CDD:350505"
     Region          1066..1270
                     /region_name="R-PTP-G-2"
                     /note="PTP-like domain of receptor-type tyrosine-protein
                     phosphatase G, repeat 2; cd17670"
                     /db_xref="CDD:350508"
     CDS             1..1306
                     /gene="PTPRG"
                     /coded_by="XM_041461824.1:283..4203"
                     /db_xref="GeneID:121350458"
ORIGIN      
        1 mkntgktvai llkddyfvsg aglpgrfkae kvefhwgqsn gsagsehsin gkrfpvemqi
       61 ffynpddfds fgtavlenrv vgamavffqv sqrdnsaldp iihglkgvvh heketfldpf
      121 vlrellptsl gsyyrytgsl ttppcseive wivfrkpvpi syhqleafys iftteqqdhv
      181 ksveylrnnf rpqqslnnrk vsksavkdaw nqdmtdilen plgteaskac stppvnmkvq
      241 pvnrtallvt wnqpetiyhp pimnymisys wtknedekek tftkdsdkdl kaiishvspd
      301 ilylfrvqav crnemrsdfs qtmlfqantt rifegtrivk tgvptaspas sadmapissg
      361 sstwtssglp fsfvsmatgm gpsssgsqat vasvvtstll aglgfsgggi ssfpssvwpt
      421 rlpaaaapsk qagravvatt eaaaaspgpe rdsaltkdge gaeegekdek sesedgereh
      481 eeeeekdaek keksrataas earnstepsv avaspnrtae degnktlpge vpnqnvvpta
      541 ggaekesfve adtqpqllps tqvppaftne lylgkiprkp ettrnpppkm drfpeeypsd
      601 nkfitinpag knsssmatrp spgkmewiip livvsaltfv clilliavlv ywrkcfqtah
      661 fyvedssspr vvpnesipii pipddmeaip vkqfvkhise lysnnqhgfs edfeevqrct
      721 admnitaehs nhpdnkhknr yinilaydhs rvklrplpgk dskhsdyina nyvdgynkak
      781 ayiatqgplk stfedfwrmi weqntgiivm itnlvekgrr kcdqywpten seeygniivt
      841 lkstnvhacy tvrrftvrnt kmkkgqkgnp kgrqnertvi qyhytqwpdm gvpeyalpvl
      901 tfvrrssaar tpdmgpvvvh csagvgrtgt yividsmlqq ikdkstvnvl gflkhirtqr
      961 nylvqteeqy ifihdallea ilgketevsa nqlhsyvnsi lipgiggktr lekqfklvtq
     1021 cnakyvecfs aqkdcnkekn rnssvvpser arvglaplpg mkgtdyinas yimgyyrsne
     1081 fiitqhplph ttkdfwrmiw dhnaqiivml pdnqslaede fvywpsrees mnceaftvtl
     1141 iskdrlclsn eeqiiihdfi leatqddyvl evrhfqcpkw pnpdapisst felinvikee
     1201 altrdgptiv hdeygavsag tlcalttlsq qlenenavdv fqvakminlm rpgvftdieq
     1261 yqflykamls lvstkengng pmtldkngav masdesdpae smeslv
//
LOCUS       XP_041317770             656 aa            linear   VRT 06-MAY-2021
DEFINITION  thioredoxin reductase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041317770
VERSION     XP_041317770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..656
                     /product="thioredoxin reductase 3"
                     /calculated_mol_wt=71475
     Region          79..160
                     /region_name="GRX_GRXh_1_2_like"
                     /note="Glutaredoxin (GRX) family, GRX human class 1 and 2
                     (h_1_2)-like subfamily; composed of proteins similar to
                     human GRXs, approximately 10 kDa in size, and proteins
                     containing a GRX or GRX-like domain. GRX is a glutathione
                     (GSH) dependent reductase; cd03419"
                     /db_xref="CDD:239511"
     Site            order(85,88,90,130..133,144..147)
                     /site_type="other"
                     /note="GSH binding site [chemical binding]"
                     /db_xref="CDD:239511"
     Site            order(88,91)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239511"
     Region          170..656
                     /region_name="TGR"
                     /note="thioredoxin and glutathione reductase
                     selenoprotein; TIGR01438"
                     /db_xref="CDD:273624"
     CDS             1..656
                     /gene="TXNRD3"
                     /coded_by="XM_041461836.1:97..2067"
                     /db_xref="GeneID:121350465"
ORIGIN      
        1 mqggepswac cppslppirs arlvmlpaae gagavegqcg crgegvgaat amapppgqtr
       61 lpdwdglklr vrtliashrv mifsksycpy cnkvkelfrs lrveyyalel dvaddgasiq
      121 qvlaeltnqr tvpnvfvngt hvggcdatyq aykdgslqkl lgdnqitepy eydliiiggg
      181 sgglacskea aalgkkvmvl dyvvptplgt swglggtcvn vgcipkklmh qaallgqalq
      241 dsrkygwqye eqvkhnwetm veavqnyigs lnwgyrvslr eksvtylnsy gefvephkik
      301 atnrkgqvty htaetfvlat gerprypgip gdkefcitsd dlfslpycpg ktlvvgasyv
      361 alecagflag lgldvtvmvr sillrgfdqe maekvgayme thgvkfirkf vpvqveqleq
      421 gmpgrlkvta kstegpkile eeyntvliai grdactrnig lqtigvkine kngkvpvnde
      481 eqtnvpyvya igdilegkle ltpvaiqagr llaqrlyggs skkcdyinvp ttvftpleyg
      541 scgypeekai deygeqnlev yhtlfwplew tvpgrdnntc yakiicnkqd nnrviglhvl
      601 gpnagevtqg faaaikcglt kelldetigi hptcaevftt mditkssgqd itqkgc
//
LOCUS       XP_041317781             203 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional regulatory protein AlgP-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317781
VERSION     XP_041317781.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461847.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..203
                     /product="transcriptional regulatory protein AlgP-like"
                     /calculated_mol_wt=20869
     CDS             1..203
                     /gene="LOC121350475"
                     /coded_by="XM_041461847.1:1..612"
                     /db_xref="GeneID:121350475"
ORIGIN      
        1 mkrgslrcel dsatpsglqq aaiggtgger vrpagslrya vpaagarphp gtadragapr
       61 aapaaprhrp gragpaappl aaprappali gcatlrpllk glrqlpaarr ratpparpqa
      121 rpmtsrqakr tpadrplaea pacngggtap paegeppgds lstrwrrwpl araqagllpp
      181 plgpfpsppv qpcvrleeaq twq
//
LOCUS       XP_041317795             433 aa            linear   VRT 06-MAY-2021
DEFINITION  methyl-CpG-binding domain protein 4, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317795
VERSION     XP_041317795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461861.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..433
                     /product="methyl-CpG-binding domain protein 4"
     Region          86..154
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Site            order(97,99,101,108,110,119,122,126)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238069"
     Region          306..>373
                     /region_name="Nth"
                     /note="Endonuclease III [Replication, recombination and
                     repair]; COG0177"
                     /db_xref="CDD:439947"
     CDS             1..433
                     /gene="MBD4"
                     /coded_by="XM_041461861.1:<1..1302"
                     /db_xref="GeneID:121350485"
ORIGIN      
        1 gpgtarhgpa rlgtpgaerg adsagpapgp gggpcpgppr rprssagsst lpglffpcsp
       61 ggssrgaaae rpgpspgcgd hgpagpsavp rgwqrvssrr ragrtagrvd vyfvspegkk
      121 lrskralvey lqktgettlk aadfdfaapr gstrsglrgy gtgaartdle kedcqskvqe
      181 lhaqngaeag iqniqagser ledaasaveg tdlvvtgkvp aagdlgersa gsdseleaep
      241 wgrtsfaaar msaeesvprt qverrktspy fsskyskeap spprrkalrk wtpprspfnl
      301 iqetlfhdpw klliatifln ktsgkmaipv lweflkkyps pevaraadwk emsellkplg
      361 lyelraktii rfsgeylska wrypielhgi gkygndsyri fcvnewkevq pqdhklnvyh
      421 twlwenrerl sid
//
LOCUS       XP_041317804             472 aa            linear   VRT 06-MAY-2021
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317804
VERSION     XP_041317804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 4 isoform X1"
                     /calculated_mol_wt=54278
     Region          33..252
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          255..441
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..472
                     /gene="LOC121350496"
                     /coded_by="XM_041461870.1:33..1451"
                     /db_xref="GeneID:121350496"
ORIGIN      
        1 maaapaarel tqnplqktwe pydnglpagh saqrgvcmtn cptlivmvgl pargktyisk
       61 kltrylnwig vptkefnvgq yrrdlvkkyk sfefflpdne eglkirkqca laalndvrqy
      121 lseenghvav fdatnttrer retiykfgee ngyktffves vcvdpeviaa nivqvklgsp
      181 dyvdcsndea tedfmkriec yknsyetlde tldkdlsyik imdvgrsylv nrvmdhiqsr
      241 ivyylmnihv tprsiylcrh geselnlkgr iggdpglsvr gkefarslaq fineqnikdl
      301 kvwtsqmkrt iqtaealgvp yeqwkvlnei dagvceemty eeiqenyple falrdqdkyr
      361 yrypkgesye dlvqrlepvi melerqenvl vichqavmrc llayfldkpa eqlpylkcpl
      421 htvlkltpva ygckvesifl nveavnthrd kpenvgvnrs reealrtvpt hl
//
LOCUS       XP_041317814             465 aa            linear   VRT 06-MAY-2021
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317814
VERSION     XP_041317814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 4 isoform X2"
                     /calculated_mol_wt=53388
     Region          31..245
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          248..434
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..465
                     /gene="LOC121350496"
                     /coded_by="XM_041461880.1:16..1413"
                     /db_xref="GeneID:121350496"
ORIGIN      
        1 msiialplaq pskiqrkkgg hcpagapsvc mtncptlivm vglpargkty iskkltryln
       61 wigvptkefn vgqyrrdlvk kyksfefflp dneeglkirk qcalaalndv rqylseengh
      121 vavfdatntt rerretiykf geengyktff vesvcvdpev iaanivqvkl gspdyvdcsn
      181 deatedfmkr iecyknsyet ldetldkdls yikimdvgrs ylvnrvmdhi qsrivyylmn
      241 ihvtprsiyl crhgeselnl kgriggdpgl svrgkefars laqfineqni kdlkvwtsqm
      301 krtiqtaeal gvpyeqwkvl neidagvcee mtyeeiqeny plefalrdqd kyryrypkge
      361 syedlvqrle pvimelerqe nvlvichqav mrcllayfld kpaeqlpylk cplhtvlklt
      421 pvaygckves iflnveavnt hrdkpenvgv nrsreealrt vpthl
//
LOCUS       XP_041317822             454 aa            linear   VRT 06-MAY-2021
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317822
VERSION     XP_041317822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461888.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 4 isoform X3"
                     /calculated_mol_wt=52665
     Region          20..234
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          237..423
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..454
                     /gene="LOC121350496"
                     /coded_by="XM_041461888.1:118..1482"
                     /db_xref="GeneID:121350496"
ORIGIN      
        1 mwgcrrrgrc pqgrrcrvcm tncptlivmv glpargktyi skkltrylnw igvptkefnv
       61 gqyrrdlvkk yksfefflpd neeglkirkq calaalndvr qylseenghv avfdatnttr
      121 erretiykfg eengyktffv esvcvdpevi aanivqvklg spdyvdcsnd eatedfmkri
      181 ecyknsyetl detldkdlsy ikimdvgrsy lvnrvmdhiq srivyylmni hvtprsiylc
      241 rhgeselnlk griggdpgls vrgkefarsl aqfineqnik dlkvwtsqmk rtiqtaealg
      301 vpyeqwkvln eidagvceem tyeeiqenyp lefalrdqdk yryrypkges yedlvqrlep
      361 vimelerqen vlvichqavm rcllayfldk paeqlpylkc plhtvlkltp vaygckvesi
      421 flnveavnth rdkpenvgvn rsreealrtv pthl
//
LOCUS       XP_041317830             446 aa            linear   VRT 06-MAY-2021
DEFINITION  6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041317830
VERSION     XP_041317830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="6-phosphofructo-2-kinase/fructose-2,
                     6-bisphosphatase 4 isoform X4"
                     /calculated_mol_wt=51588
     Region          12..226
                     /region_name="6PF2K"
                     /note="6-phosphofructo-2-kinase; pfam01591"
                     /db_xref="CDD:396253"
     Region          229..415
                     /region_name="His_Phos_1"
                     /note="Histidine phosphatase superfamily (branch 1);
                     pfam00300"
                     /db_xref="CDD:459751"
     CDS             1..446
                     /gene="LOC121350496"
                     /coded_by="XM_041461896.1:16..1356"
                     /db_xref="GeneID:121350496"
ORIGIN      
        1 mkdchqpaev cmtncptliv mvglpargkt yiskkltryl nwigvptkef nvgqyrrdlv
       61 kkyksfeffl pdneeglkir kqcalaalnd vrqylseeng hvavfdatnt trerretiyk
      121 fgeengyktf fvesvcvdpe viaanivqvk lgspdyvdcs ndeatedfmk riecyknsye
      181 tldetldkdl syikimdvgr sylvnrvmdh iqsrivyylm nihvtprsiy lcrhgeseln
      241 lkgriggdpg lsvrgkefar slaqfineqn ikdlkvwtsq mkrtiqtaea lgvpyeqwkv
      301 lneidagvce emtyeeiqen yplefalrdq dkyryrypkg esyedlvqrl epvimelerq
      361 envlvichqa vmrcllayfl dkpaeqlpyl kcplhtvlkl tpvaygckve siflnveavn
      421 thrdkpenvg vnrsreealr tvpthl
//
LOCUS       XP_041317842             462 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SEC13 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041317842
VERSION     XP_041317842.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461908.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..462
                     /product="protein SEC13 homolog"
                     /calculated_mol_wt=48789
     Region          53..430
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          203..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          248..294
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          302..350
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          356..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          406..432
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..462
                     /gene="SEC13"
                     /coded_by="XM_041461908.1:1..1389"
                     /db_xref="GeneID:121350520"
ORIGIN      
        1 maegsagrgl aarsvpcraa prrreepgrr algagkglcp gpgggsgrsa gpargrtgqs
       61 plpplalslp srgsgrpgtr hgrnvvaggr gaagpvvrgt gvprrsarae agrsgaggvp
      121 vrgpsaaggg lpprpgqpga rhrvsvintv dtshedmihd aqmdyygtrl atcssdrsvk
      181 ifdvrnggqi liadlrgheg pvwqvawahp mygnilascs ydrkviiwke engtwektye
      241 ytghdssvns vcwaphdygl ilacgssdga isllsytgdg qwevkkisna htigcnavsw
      301 apavvpgsli eqpsgqkpny ikrfasggcd nlvkiwkeee gqwkeeqkle ahsdwvrdva
      361 wapsiglpts tiascsqdgr vfiwtcddas gnswspkllh kfndvvwhvs wsitanilav
      421 sggdnkvtlw kesvdglwac isdvnkgqgg vsavtegqqn eq
//
LOCUS       XP_041317856            1113 aa            linear   VRT 06-MAY-2021
DEFINITION  SLIT-ROBO Rho GTPase-activating protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041317856
VERSION     XP_041317856.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461922.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1113
                     /product="SLIT-ROBO Rho GTPase-activating protein 3"
                     /calculated_mol_wt=125567
     Region          57..291
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(62,65..66,70,72..73,76..77,79..80,90..91,93..94,
                     97..98,100..101,104,143,146..147,250,253..254,256,258,
                     261..262,264..265,268..269,272..273,275..276,279..280,
                     282..283)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          515..702
                     /region_name="RhoGAP_srGAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in srGAPs. srGAPs are
                     components of the intracellular part of Slit-Robo
                     signalling pathway that is important for axon guidance and
                     cell migration. srGAPs contain an...; cd04383"
                     /db_xref="CDD:239848"
     Site            order(555,594,598,667,670..671,693)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239848"
     Site            555
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239848"
     Region          761..813
                     /region_name="SH3_srGAP1-3"
                     /note="Src homology 3 domain of Slit-Robo GTPase
                     Activating Proteins 1, 2, and 3; cd11955"
                     /db_xref="CDD:212888"
     Site            order(766,768,771,775,793..794,807,809..810)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212888"
     CDS             1..1113
                     /gene="SRGAP3"
                     /coded_by="XM_041461922.1:1..3342"
                     /db_xref="GeneID:121350527"
ORIGIN      
        1 mqeflvdcrv qchglrawre lqqscllwdk ggepswpvsv advlfllvsc vpaeirtqlv
       61 eqfkcleqqs esrlqllqdl qeffrrkaei eleysrslek laerfsskir ssrehqfkkd
      121 qhllspvncw ylvltqtrre srdhatlndi fmnnvivrls qisedvirlf kkskeiglqm
      181 heellkvtne lytvstcpsv pekqfnksgd isvnllrhed rpqrrssvkk iekmkekrqa
      241 kysenklkct karndyllnl aatnaavsky yihdvsdlid ccdlgfhasl artfrtylsa
      301 eynletsrhe gldvienavd nldarsdkht imdmcnqvfc pplkfefqph mgdevcqvsa
      361 qqpvqtellm ryhqlqsrla tlrieneevr ktldatmqtl qdmltvedfd vsdafqhsrs
      421 tesvksaase tymskiniak rranqqetem fyftkfkeyl ngsnlitklq akhdllkqtl
      481 gegeraecgt trppclppkp qkmrrprpls vynhklfngn metfikdsgq aiplvvesci
      541 ryinlyglqq qgifrvpgsq vevndiknsf ergedpladd qnerdinsva gvlklyfrgl
      601 enplfpkerf qdlistikie npaervhqiq qiivtlprav ivvmrylfaf lnhlsqysde
      661 nmmdpynlai cfgptlmhip dgqdpvscqa hvneviktii ihhegifpsh relegpvyek
      721 cmtggeeycd sphsepgtid evdhdngtep htsdeeveqi eaiakfdyig rsprelsfkk
      781 gaslllyhra sedwwegrhn gvdgliphqy ivvqdmddaf sdslsqkads eassgplldd
      841 kasskndiqs ptdhimdygf ggvmgrvrlr sdgaaiprrr sggdthsppr glgpgidtpp
      901 raaacpssph kiplnrgrie spekrrmatf gsagsinfpd rkaladshpl rstcgstrhs
      961 slgdqkslea ealaediekt mstalnelre lerqntakqa pdvvldtlep mknpplgaan
     1021 sepasplhti lirdpeaamr rssssttemm ttfkpalsar lagaqlrppp mrpvrpvvqh
     1081 rsssssssgv gspavtptek lfpsssadks gtm
//
LOCUS       XP_041317869             602 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RAD18 [Pyrgilauda ruficollis].
ACCESSION   XP_041317869
VERSION     XP_041317869.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461935.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..602
                     /product="E3 ubiquitin-protein ligase RAD18"
                     /calculated_mol_wt=64565
     Region          119..433
                     /region_name="rad18"
                     /note="DNA repair protein rad18; TIGR00599"
                     /db_xref="CDD:273165"
     Region          406..>468
                     /region_name="vATP-synt_E"
                     /note="ATP synthase (E/31 kDa) subunit; cl23750"
                     /db_xref="CDD:419987"
     CDS             1..602
                     /gene="RAD18"
                     /coded_by="XM_041461935.1:1..1809"
                     /db_xref="GeneID:121350533"
ORIGIN      
        1 mgsasrevsa gwapgcpghh pllitessrq qhgpvltrpg thrgsvlgta respglapag
       61 pwaaaacgga gfgralegas cgpavcdtgv cqahsvcarc vpgvfaagpa agtapaaltp
      121 lslqavddll rcgicfdyfs iaviipqcsh sycslcirks lsyktqcptc cvavaesdlk
      181 nnrilddlvk sfnsarqqll qlvleappvp sppahsqrpa eshcspvsqp eskevpgtds
      241 slrkdkvcps tragglawtg qksfkteerr dlhstsaeag gqdsqgrsqe ipgstqshek
      301 pstsvlkgdr kvecpvceva ileqyinkhl dscltreekk dslrssdhkr klmskvvynl
      361 lsdrdlrkkl kehglstsgt rqqlikrhqe fvhmynaqcd slnpksvaev vkelekneki
      421 rvqlecnkpg ensltftkdq teeeideiha eyrnkhrsef kllvdqvnkr wkkmgerkag
      481 saqnkeevav kglpaasepg eeaptavvpg eaqalqseip ggqssespsl rgwqrsaspe
      541 lslssgstcs tssdiltdme gsevcsassd ssssvaltgn krklrripgd sgtmrqgkrk
      601 rs
//
LOCUS       XP_041317880             852 aa            linear   VRT 06-MAY-2021
DEFINITION  metabotropic glutamate receptor 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041317880
VERSION     XP_041317880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461946.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..852
                     /product="metabotropic glutamate receptor 7"
                     /calculated_mol_wt=94728
     Region          40..441
                     /region_name="Periplasmic_Binding_Protein_type1"
                     /note="Type 1 periplasmic binding fold superfamily;
                     cl10011"
                     /db_xref="CDD:471960"
     Region          449..499
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          519..825
                     /region_name="7tmC_mGluR7"
                     /note="metabotropic glutamate receptor 7 in group 3,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15451"
                     /db_xref="CDD:320567"
     Region          519..544
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320567"
     Site            order(522,525..526,529..530,532..533,567,571,574..575,583,
                     587)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320567"
     Region          556..577
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320567"
     Site            order(576,588..589,592..593,596,681,686,689..690,693,727,
                     730..731,734,738,751..752,755,758,762)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320567"
     Region          586..610
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320567"
     Region          632..652
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320567"
     Region          682..708
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320567"
     Region          716..739
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320567"
     Region          749..774
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320567"
     CDS             1..852
                     /gene="GRM7"
                     /coded_by="XM_041461946.1:1..2559"
                     /db_xref="GeneID:121350541"
ORIGIN      
        1 mgrpgrvlrl lallelpccl lelllgeaar gqemyaphsi rlegditlgg lfpvhakgpp
       61 gspcgdikke ngihrleaml yaldqinsdp dllpnvtlga rildtcsrdt yaleqsltfv
      121 qaliqkdtsd vrctngeppv fvkpekvvgv igasgssvsi mvanilrlfq ipqisyasta
      181 pelsddrryd ffsrvvppds fqaqamvdiv kalgwnyvst lasegnygek gvesfmqisr
      241 eagglciaqs lkipqdrkdk sidfdriirq lletpnarai vifahdedir qvlaaakrad
      301 qvghflwvgs dtwgskvspl lqqedvaega itilpkrati egfdtyftsr tlennrrnvw
      361 faeyweenfn ckltitgskk edtdrkctgs agtpvmfnkn gdapgrydif qfhssntstp
      421 gyrlvgqwtd dlqlnieemq wgggvravpp svcsqpcrpg erkkmvkgmp ccwhcelcdg
      481 yqyqadevtc llcsynerpn enrtgcrsip iiklewhspw avipvflaml giiatifvma
      541 tfiryndtpi vrasgrelsy vlltgiflcy iitflmiakp dvavcsfrri flglgmcisy
      601 aalltktnri yrifeqgkks vtaprlispt sqlaitssli svqllgvfiw favdppniii
      661 dydeqktmnp dqargvlkcd itdlqiicsl gysillmvtc tvyaiktrgv penfneakpi
      721 gftmyttciv wlafipiffg taqsaeklyi qtttltismn lsasvalgml ympkvyiiif
      781 hpelnvqkrk rsfkavvtaa tmssrlshkp sdrpngeakt elcenvdpnn sippvrksvq
      841 ksvtwytlpp tv
//
LOCUS       XP_041317893            2642 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol 1,4,5-trisphosphate receptor type 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317893
VERSION     XP_041317893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461959.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2642
                     /product="inositol 1,4,5-trisphosphate receptor type 1"
                     /calculated_mol_wt=300725
     Region          5..184
                     /region_name="Ins145_P3_rec"
                     /note="Inositol 1,4,5-trisphosphate/ryanodine receptor;
                     pfam08709"
                     /db_xref="CDD:462572"
     Region          179..399
                     /region_name="beta-trefoil_MIR_ITPR1"
                     /note="MIR domain, beta-trefoil fold, found in inositol
                     1,4,5-trisphosphate receptor type 1 (ITPR1) and similar
                     proteins; cd23287"
                     /db_xref="CDD:467758"
     Site            order(200..201,255,328,330,341,347,379..380)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467758"
     Site            order(220,222..224,230)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:467758"
     Region          430..624
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     Region          1122..1241
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     Region          1851..1958
                     /region_name="RIH_assoc"
                     /note="RyR and IP3R Homology associated; pfam08454"
                     /db_xref="CDD:462482"
     Region          2239..2492
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..2642
                     /gene="ITPR1"
                     /coded_by="XM_041461959.1:129..8057"
                     /db_xref="GeneID:121350549"
ORIGIN      
        1 mtdkmssflh igdicslyae gstngfistl glvddrcvvq peagdlnnpp kkfrdclfkl
       61 cpmnrysaqk qfwkaakpga nsttdavlln klhhaadlek kqnetenrkl lgtviqygnv
      121 iqvgcehlcq vvigdkvvln pvnagqplha sshqlvdnpg cnevnsvncn tswkivlfmk
      181 wsdnkddilk ggdvvrlfha eqekfltcde hrkkqhvflr ttgrqsatsa tsskalweve
      241 vvqhdpcrgg agywnslfrf khlatghyla aevnpdyeed dlecqssldp eqeaarrgrg
      301 pqekmayslv svpegndiss ifeldpttlr ggdslvprns yvrlrhlctn twvhstnipi
      361 dkeeekpvml kigtspvked keafaivpvs paevrdldfa ndaskvlgsi agklekgtit
      421 qnerrsvtkl ledlvyfvtg gtnsgqdvle vvfskpnrer qklmreqnil kqifkllqap
      481 ftdsgdgpml rleelgdqrh apfrhicrlc yrvlrhsqqd yrknqeyiak qfgfmqkqig
      541 ydvlaedtit allhnnrkll ekhitaaeid tfvslvrknr eprfldylsd lcvsmnksip
      601 vtqelickav lnpanadili etklvlsrfe feevssgena levgedeeev wlfwrdsnke
      661 irsksirela qdakegqked rdvlsyyryq lnlfarmcld rqylaineis gqldvdlilr
      721 cmadenlpyd lrasfcrlml hmhvdrdpqe qvtpvkyarl wseipseiai ddydssgtsk
      781 deikerfaqt mefveeylrd vvcqrfpfsd keknkltfev lsnvfrfyil apktasrtgg
      841 snvmrsihgv gelmtqvvlr gggflpmtpl aaapegnvkq sepekedilv mdtklkiiei
      901 lqfilnvrld yriscllcif khefdesnaq msesptgsss qemptnvpga ldfehieeqa
      961 egifggrkvs lhseentpld lddhggrtfl rvllhltmhd ypplvsgalq llfrhfsqrq
     1021 evlqafkqvq llvtsqdvdn ykqikqdldq lrsiveksel wvykgqgpde amdsvpgene
     1081 hkkkeeghsk sqkpestssy nyrvvkeill rlsklcvqeg asvrksrkqq qrllrnmgah
     1141 avvlellqip yekaedtrmq eimklahefl qnfcagnqqn qallhkhinl flnpgileav
     1201 tmqhifmnnf qlcseinerv vqhfvhciet hgrnvqyikf lqtivkaegk fikkcqdmvm
     1261 aelvnagedv lvfyndrasf qtlvqmmrse rdrmdenspl myhihlvell avctegknvy
     1321 teikcnsllp lddivrvvth edcipevkia yinflnhcyv dtevemkeiy tsnhmwklfe
     1381 nflvdicrac nntsdrkhad silekyvtei vmsivttffs spfsdqsttl qtrqpvfvql
     1441 lqgvfrvyhc twlmpsqkas vescirvlsd vaksraiaip vdldsqvnnl flkshnivqk
     1501 tamnwrmtar naarrdsvla asrdyrniie rlqdivsale drlrplvqae lsvlvdvlhr
     1561 pellfpentd arrkcesggf icklikhtkq lleeneeklc ikvlqtlrem mtkdrgygek
     1621 gealrqvlvn ryygnvraag rresltafgn gplaagspgk agpgggssgs ssmsrgemsl
     1681 advqchldke gasnlvidli mnatsdrvfh esillaiall eggnttiqhs ffcrltedkk
     1741 sekffkvfyd rmkvaqqeik atvtvntsdl gnkkkdedsd rdvpnrkrvr epmtqiteev
     1801 rdqlleasaa trkayntyrr eadpeehysa gegaqaaadk skdelemsav isimqpilrf
     1861 lqllcenhnr dlqnflrcqn nktnynlvce tlqfldcicg sttgglgllg lyineknval
     1921 inqtleslte ycqgpchenq nciathesng idiitaliln dinplgkkrm dlvlelknna
     1981 sklllaimes rhdsenaeri lynmrpkelv evikkaylqg evefedgeng edvaasprnv
     2041 ghniyilahq larhnkelqn mlkpggqieg dealefyakh taqieivrsd rtmeqivfpv
     2101 psicefltke sklriyytte rdeqgskind fflksedlfn emnwqkklra qpflywcarn
     2161 msfwssisfn lavlmnllva ffypfkgirg gtlephlsgl lwtamlisla ivialpkphg
     2221 iraliastil rlifsvglqp tlfllgafnv cnkiiflmsf vgncgtftrg ykamimdvef
     2281 lyhllyllic alglfvheff yslllfdlvy reetllnvik svtrngrsii ltavlalilv
     2341 ylfsivgylf fkddfilevd klpnetllpd htepgetmtg eflysdlcka gssencssii
     2401 psdqliteem eeenkehtce tllmcivtvl shglrsgggv gdvlrkpske eplfaarviy
     2461 dllfffmvii ivlnlifgvi idtfadlrse kqkkeeilkt tcficglerd kfdnktvtfe
     2521 ehikeehnmw hylcfivlvk vkdsteytgp esyvaemike rnldwfprmr amslvssdse
     2581 geqnelrnlq eklestmklv tnlsgqlsel kdqmteqrkq kqrigllghp ppmnvnlqqq
     2641 pa
//
LOCUS       XP_041317907             941 aa            linear   VRT 06-MAY-2021
DEFINITION  contactin-3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041317907
VERSION     XP_041317907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461973.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..941
                     /product="contactin-3-like"
                     /calculated_mol_wt=102099
     Region          139..227
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          157..161
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          170..174
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          192..196
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          206..211
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          219..222
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          232..315
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          247..251
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          260..264
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          281..285
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          295..300
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          308..311
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          320..408
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          339..343
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          352..356
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          374..378
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          388..393
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          401..404
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          410..510
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          429..433
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          444..448
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          472..476
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          486..491
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          499..502
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          518..>898
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..941
                     /gene="LOC121350554"
                     /coded_by="XM_041461973.1:1..2826"
                     /db_xref="GeneID:121350554"
ORIGIN      
        1 mrrreispfl mgndpaialg gngaftpper aivlglwgtg veflsgmcee efdeqfdeme
       61 mkghianivs rgkgeenavs gdrkpqllil nflgccspad vessrmkmrs avsvregqgv
      121 vllcgtppra ggvmgeyepk ievqfpetla aakgstvkle cfalgnpvpq inwrrtdglp
      181 fpskiklrks ngmieipnfq qedaglyeci tensrgknia rgrltyyakp hwiqsikdve
      241 vavedtlywd crasgkpkps yrwlkngeql aiegriqien galtisnlnl tdsgryqcia
      301 enkhgvisss aelrvvasap dfskspmkkl iqvqigstvd feckpkafpk akcswkkgge
      361 klqenerisl lkdgglrian vtkgdagsyt clatnqfgta rgstslivte ptritlapsn
      421 mdvtvgesvv lpcqvqhdpl ldisftwyfn gsltdfqrda shlekvggsa sgdlmirniq
      481 lkhsgkyvcm vktevdsvas aadlivrgsp gppehvrvde vtdttaqisw qegtdnhspv
      541 ttytiqartp fsvgwqratt vpevidgktf tstvvdlnpw veyefrvvas nkigggepsl
      601 psekvrteea vpeippsevs ggggsrselv itwdpvpeel qngegfgyvv afrpsgtttw
      661 iqtvvtspdt pryvfrnesi lpfspyevkv gvynnkgegp fsavatvfsa eeepstapsg
      721 vsatslsssa iqvswtaipw kmsngrllgy evrywnkgqk eessnrvkaa gnatsikitg
      781 lrsnlayyta vraynsagag pfsatvnatt kkpppsqppg nvvwnvtdsr vvlsweevra
      841 mdnesevtgy kvlyrsggqs aaevlttagt taelwlrlkd dyfievratt eggdgssseq
      901 iliprlasmd argsgpsvls ifsvssflat ifsltlnsvl w
//
LOCUS       XP_041317918             242 aa            linear   VRT 06-MAY-2021
DEFINITION  myoD family inhibitor domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041317918
VERSION     XP_041317918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461984.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="myoD family inhibitor domain-containing protein
                     2"
                     /calculated_mol_wt=27080
     Region          83..242
                     /region_name="MDFI"
                     /note="MyoD family inhibitor; pfam15316"
                     /db_xref="CDD:464641"
     CDS             1..242
                     /gene="MDFIC2"
                     /coded_by="XM_041461984.1:1..729"
                     /db_xref="GeneID:121350561"
ORIGIN      
        1 mawtgtisyp eptlvwistl ehfrdllspf saltinlnsl rlkhrspktt vttastlnpn
       61 rrtsslplla lpgvtpssed hpdnqltnek htdekpmkgi vmssvaefsi tdasskgtkn
      121 ekklsdasrs siaslekcre ftyieddasv hqrdsddeca tlilaclfcq fwdflimlpd
      181 tcehwltdtc cpsnryyqts dedhgnndcn cdcdidcslf eschetgecl elameisevc
      241 yr
//
LOCUS       XP_041317931             577 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121350570 [Pyrgilauda ruficollis].
ACCESSION   XP_041317931
VERSION     XP_041317931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041461997.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..577
                     /product="uncharacterized protein LOC121350570"
                     /calculated_mol_wt=62866
     Region          <158..295
                     /region_name="TrmR"
                     /note="tRNA 5-hydroxyU34 O-methylase TrmR/YrrM
                     [Translation, ribosomal structure and biogenesis];
                     COG4122"
                     /db_xref="CDD:443298"
     Region          331..576
                     /region_name="FabG"
                     /note="NAD(P)-dependent dehydrogenase, short-chain alcohol
                     dehydrogenase family [Lipid transport and metabolism];
                     COG1028"
                     /db_xref="CDD:440651"
     CDS             1..577
                     /gene="LOC121350570"
                     /coded_by="XM_041461997.1:1..1734"
                     /db_xref="GeneID:121350570"
ORIGIN      
        1 mdykhvftpk lakslrvlgr edeqiptsst lqlssgspgm lppvvvkmlq eeyvsfslev
       61 qlgwetpagh iaenllkake ialndphvpe qlrnylqkal dvalgldpyl damaaskrkt
      121 spkpipedte ggesrvrlqe thasgslngk lfgqeeelpd ngkifacaee pylgvnsqea
      181 fdyssdgkki smrvgpladt lealhaedeh fdivfidadq rnavqyysfv mdnhllsmda
      241 vicventlmk gqvylenvsd envlavrkln svinsdprve qvilpvqsgl slirrspvpp
      301 daviesktev vkddvfwgcs rrrilerlrl dgrvayvtgg gqgigrafah algeagakva
      361 vvdlvlakae avacelslkg ikslalaadv skpedvqrmv daivarwgtv hiacnnagin
      421 lnsaseetsl eewdktfnvn lrglflccqa agrimlnqgy gkiintasma slivphpqkq
      481 laynaskagv vkltqtlgae widrgvkvnc ispgivdtpl irsrelrplv rrwladipag
      541 rlaqptdlqa avvylaseas dymtghnlvi eggqslw
//
LOCUS       XP_041317942             477 aa            linear   VRT 06-MAY-2021
DEFINITION  2-epi-5-epi-valiolone synthase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041317942
VERSION     XP_041317942.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462008.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="2-epi-5-epi-valiolone synthase-like"
                     /calculated_mol_wt=53124
     Region          79..446
                     /region_name="EEVS"
                     /note="2-epi-5-epi-valiolone synthase (EEVS); cd08199"
                     /db_xref="CDD:341478"
     Site            order(123,130,154,157,186..188,191,211..212,214,218..219,
                     224,233..234,251,254..256,259,262,266,339,355,359)
                     /site_type="active"
                     /db_xref="CDD:341478"
     Site            order(218,266,339,355)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:341478"
     CDS             1..477
                     /gene="LOC121350577"
                     /coded_by="XM_041462008.1:1..1434"
                     /db_xref="GeneID:121350577"
ORIGIN      
        1 mlvteeacaa avpgatmpqe prqtdfqlvr vkstwsrvkk gealsndede vtlseatige
       61 ciseggiswi veapiyfcyk vvetynilep snttllwghi tdpqqtelat askgklrrfi
      121 videvvdkly gskvreyfeq nnvqhkilal ptteetksmd lvlnilhevq sfsldrrtep
      181 iiaigggvcl divglaasly rrrtpyirvp ttllsyvdas vgakngvnfl qcknklggyt
      241 ppvasfldrs flrsiprrhi snglgeilkm almkhkglfd llknhgkyll dtkfqscnsf
      301 ahhgdaalqt triaietmle elapnlwedd ldrlvdfghl ispelemrvl pslmhgeavn
      361 vdmafmtyva harglldaee keqilqcmrg lelpvwhggc swaliqralr erlkhsggql
      421 rmplptglgv adifndtsee tlerayklwv kdckmgleee lqaqgdgpap smscvpl
//
LOCUS       XP_041317956            1210 aa            linear   VRT 06-MAY-2021
DEFINITION  peregrin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317956
VERSION     XP_041317956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1210
                     /product="peregrin isoform X1"
                     /calculated_mol_wt=137374
     Region          173..654
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          329..449
                     /region_name="ePHD_BRPF1"
                     /note="Extended PHD finger found in bromodomain and PHD
                     finger-containing protein 1 (BRPF1) and similar proteins;
                     cd15701"
                     /db_xref="CDD:277171"
     Site            order(384,395..399,405,441)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277171"
     Region          629..726
                     /region_name="Bromo_brd1_like"
                     /note="Bromodomain; brd1_like subfamily. BRD1 is a
                     mammalian gene which encodes for a nuclear protein assumed
                     to be a transcriptional regulator. BRD1 has been
                     implicated with brain development and susceptibility to
                     schizophrenia and bipolar affective disorder; cd05512"
                     /db_xref="CDD:99944"
     Site            order(654,659,662,701,705,711)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     Region          1079..1198
                     /region_name="PWWP_BRPF1"
                     /note="PWWP domain found in bromodomain and PHD
                     finger-containing protein 1 (BRPF1); cd20156"
                     /db_xref="CDD:438984"
     Site            order(1092,1095,1115..1117,1120,1122,1126,1142..1143,1145,
                     1147..1151)
                     /site_type="other"
                     /note="methyl-histone binding site [polypeptide binding]"
                     /db_xref="CDD:438984"
     Site            1093..1096
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438984"
     CDS             1..1210
                     /gene="BRPF1"
                     /coded_by="XM_041462022.1:478..4110"
                     /db_xref="GeneID:121350587"
ORIGIN      
        1 mgvdfdvktf chnlratkpp yecpvgtcrk iyksysgiey hlyhydhdnp plpqhtplrk
       61 hkkkgrqara ankqspspse tsqspgrevm tyaqaqrmve vdlhgrvhri sifdnldvvs
      121 ededvpeevp engsnkente tqsvppksgk hknkekrkds nhhhhnasas ttpklpevvy
      181 releqdtpda pprptsyyry ieksaeelde eveydmdeed yiwldimner rknegvspip
      241 qeifeylmdr lekesyfesh nkgdpnalvd edavccicnd gecqnsnvil fcdmcnlavh
      301 qecygvpyip egqwlcrrcl qspsravdca lcpnkggafk qtddgrwahv vcalwipevc
      361 fantvflepi dsiehippar wkltcyickq rgsgaciqch kancytafhv tcaqqaglym
      421 kmepvretga ngtsfsvrkt aycdihtppg svrrlpalsh segeeedeee eeegkgwsse
      481 kvkkakaksr ikmkkarkil aekraaapvv svpcipphrl skitnrltiq rksqfmqrlh
      541 sywtlkrqsr ngvpllrrlq thlqsqrncd qrdtedknwa lkeqlkswqr lrhdlerarl
      601 lvelirkrek lkretikvqq valemqltpf lillrktleq lqekdtgnif sepvplsevp
      661 dyldhikkpm dfqtmkqnle ayrylnfddf eedfnliinn clkynakdti fyraairlre
      721 qggavlrqar rqaekmgidf etgmhfphcv tveeaqiqdi ededvrllls enqkhlplee
      781 qlkillerld evnagkqsig rsrrakmikk eitvlrrkla hprdlgregl erhsssargv
      841 lqshnpcekd lqtdsaaees ssqetgkglg pnssstpahe vgrrtsvlfs kknpktagpp
      901 krpgrppknr dsqippghgs spigppqlpi mgssqrqrkr grsprpssss dsdsdksted
      961 atmdlpangf ssgnqpvkks flvyrndcnl prsssdsess ssssssaasd rtsttpskqg
     1021 rgkpsfsrvn fpedssedts gtenesysvg tgrgvghgmv rkgmgrgagw lsededssld
     1081 aldlvwakcr gypsypalii dpkmpregmf hhgvpipvpp levlklgeqm tqearehlyl
     1141 vlffdnkrtw qwlprtklvp lgvnqdldke kmlegrksni rksvqiayhr amqhrnkvqg
     1201 eqssdssesd
//
LOCUS       XP_041317964            1209 aa            linear   VRT 06-MAY-2021
DEFINITION  peregrin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041317964
VERSION     XP_041317964.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462030.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1209
                     /product="peregrin isoform X2"
                     /calculated_mol_wt=137245
     Region          173..654
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          329..449
                     /region_name="ePHD_BRPF1"
                     /note="Extended PHD finger found in bromodomain and PHD
                     finger-containing protein 1 (BRPF1) and similar proteins;
                     cd15701"
                     /db_xref="CDD:277171"
     Site            order(384,395..399,405,441)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277171"
     Region          629..726
                     /region_name="Bromo_brd1_like"
                     /note="Bromodomain; brd1_like subfamily. BRD1 is a
                     mammalian gene which encodes for a nuclear protein assumed
                     to be a transcriptional regulator. BRD1 has been
                     implicated with brain development and susceptibility to
                     schizophrenia and bipolar affective disorder; cd05512"
                     /db_xref="CDD:99944"
     Site            order(654,659,662,701,705,711)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     Region          1078..1197
                     /region_name="PWWP_BRPF1"
                     /note="PWWP domain found in bromodomain and PHD
                     finger-containing protein 1 (BRPF1); cd20156"
                     /db_xref="CDD:438984"
     Site            order(1091,1094,1114..1116,1119,1121,1125,1141..1142,1144,
                     1146..1150)
                     /site_type="other"
                     /note="methyl-histone binding site [polypeptide binding]"
                     /db_xref="CDD:438984"
     Site            1092..1095
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438984"
     CDS             1..1209
                     /gene="BRPF1"
                     /coded_by="XM_041462030.1:48..3677"
                     /db_xref="GeneID:121350587"
ORIGIN      
        1 mgvdfdvktf chnlratkpp yecpvgtcrk iyksysgiey hlyhydhdnp plpqhtplrk
       61 hkkkgrqara ankqspspse tsqspgrevm tyaqaqrmve vdlhgrvhri sifdnldvvs
      121 ededvpeevp engsnkente tqsvppksgk hknkekrkds nhhhhnasas ttpklpevvy
      181 releqdtpda pprptsyyry ieksaeelde eveydmdeed yiwldimner rknegvspip
      241 qeifeylmdr lekesyfesh nkgdpnalvd edavccicnd gecqnsnvil fcdmcnlavh
      301 qecygvpyip egqwlcrrcl qspsravdca lcpnkggafk qtddgrwahv vcalwipevc
      361 fantvflepi dsiehippar wkltcyickq rgsgaciqch kancytafhv tcaqqaglym
      421 kmepvretga ngtsfsvrkt aycdihtppg svrrlpalsh segeeedeee eeegkgwsse
      481 kvkkakaksr ikmkkarkil aekraaapvv svpcipphrl skitnrltiq rksqfmqrlh
      541 sywtlkrqsr ngvpllrrlq thlqsqrncd qrdtedknwa lkeqlkswqr lrhdlerarl
      601 lvelirkrek lkretikvqq valemqltpf lillrktleq lqekdtgnif sepvplsevp
      661 dyldhikkpm dfqtmkqnle ayrylnfddf eedfnliinn clkynakdti fyraairlre
      721 qggavlrqar rqaekmgidf etgmhfphcv tveeaqiqdi eddvrlllse nqkhlpleeq
      781 lkillerlde vnagkqsigr srrakmikke itvlrrklah prdlgregle rhsssargvl
      841 qshnpcekdl qtdsaaeess sqetgkglgp nssstpahev grrtsvlfsk knpktagppk
      901 rpgrppknrd sqippghgss pigppqlpim gssqrqrkrg rsprpssssd sdsdksteda
      961 tmdlpangfs sgnqpvkksf lvyrndcnlp rsssdsesss sssssaasdr tsttpskqgr
     1021 gkpsfsrvnf pedssedtsg tenesysvgt grgvghgmvr kgmgrgagwl sededsslda
     1081 ldlvwakcrg ypsypaliid pkmpregmfh hgvpipvppl evlklgeqmt qearehlylv
     1141 lffdnkrtwq wlprtklvpl gvnqdldkek mlegrksnir ksvqiayhra mqhrnkvqge
     1201 qssdssesd
//
LOCUS       XP_041317973            1205 aa            linear   VRT 06-MAY-2021
DEFINITION  peregrin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041317973
VERSION     XP_041317973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1205
                     /product="peregrin isoform X3"
                     /calculated_mol_wt=136935
     Region          173..654
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          329..449
                     /region_name="ePHD_BRPF1"
                     /note="Extended PHD finger found in bromodomain and PHD
                     finger-containing protein 1 (BRPF1) and similar proteins;
                     cd15701"
                     /db_xref="CDD:277171"
     Site            order(384,395..399,405,441)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277171"
     Region          629..726
                     /region_name="Bromo_brd1_like"
                     /note="Bromodomain; brd1_like subfamily. BRD1 is a
                     mammalian gene which encodes for a nuclear protein assumed
                     to be a transcriptional regulator. BRD1 has been
                     implicated with brain development and susceptibility to
                     schizophrenia and bipolar affective disorder; cd05512"
                     /db_xref="CDD:99944"
     Site            order(654,659,662,701,705,711)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     Region          1074..1193
                     /region_name="PWWP_BRPF1"
                     /note="PWWP domain found in bromodomain and PHD
                     finger-containing protein 1 (BRPF1); cd20156"
                     /db_xref="CDD:438984"
     Site            order(1087,1090,1110..1112,1115,1117,1121,1137..1138,1140,
                     1142..1146)
                     /site_type="other"
                     /note="methyl-histone binding site [polypeptide binding]"
                     /db_xref="CDD:438984"
     Site            1088..1091
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438984"
     CDS             1..1205
                     /gene="BRPF1"
                     /coded_by="XM_041462039.1:48..3665"
                     /db_xref="GeneID:121350587"
ORIGIN      
        1 mgvdfdvktf chnlratkpp yecpvgtcrk iyksysgiey hlyhydhdnp plpqhtplrk
       61 hkkkgrqara ankqspspse tsqspgrevm tyaqaqrmve vdlhgrvhri sifdnldvvs
      121 ededvpeevp engsnkente tqsvppksgk hknkekrkds nhhhhnasas ttpklpevvy
      181 releqdtpda pprptsyyry ieksaeelde eveydmdeed yiwldimner rknegvspip
      241 qeifeylmdr lekesyfesh nkgdpnalvd edavccicnd gecqnsnvil fcdmcnlavh
      301 qecygvpyip egqwlcrrcl qspsravdca lcpnkggafk qtddgrwahv vcalwipevc
      361 fantvflepi dsiehippar wkltcyickq rgsgaciqch kancytafhv tcaqqaglym
      421 kmepvretga ngtsfsvrkt aycdihtppg svrrlpalsh segeeedeee eeegkgwsse
      481 kvkkakaksr ikmkkarkil aekraaapvv svpcipphrl skitnrltiq rksqfmqrlh
      541 sywtlkrqsr ngvpllrrlq thlqsqrncd qrdtedknwa lkeqlkswqr lrhdlerarl
      601 lvelirkrek lkretikvqq valemqltpf lillrktleq lqekdtgnif sepvplsevp
      661 dyldhikkpm dfqtmkqnle ayrylnfddf eedfnliinn clkynakdti fyraairlre
      721 qggavlrqar rqaekmgidf etgmhfphcv tveeaqiqdi ededvrllls enqkhlplee
      781 qlkillerld evnagkqsig rsrrakmikk eitvlrrkla hprdlgregl erhsssargv
      841 lqshnpcekd lqtdsaaees ssqetgkglg pnssstpahe vgrrtsvlfs kknpktagpp
      901 krpgrppknr dsqippghgs spigppqlpi mgssqrqrkr grsprpssss dsdsdksted
      961 atmdlpangf ssgnqpvkks flvyrndcnl prsssdsess ssssssaasd rtsttpskqg
     1021 rgkpsfsrvn fpedssedts gtenesysvg tgrvvrkgmg rgagwlsede dssldaldlv
     1081 wakcrgypsy paliidpkmp regmfhhgvp ipvpplevlk lgeqmtqear ehlylvlffd
     1141 nkrtwqwlpr tklvplgvnq dldkekmleg rksnirksvq iayhramqhr nkvqgeqssd
     1201 ssesd
//
LOCUS       XP_041317986             633 aa            linear   VRT 06-MAY-2021
DEFINITION  myotubularin-related protein 14 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041317986
VERSION     XP_041317986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..633
                     /product="myotubularin-related protein 14 isoform X1"
                     /calculated_mol_wt=69918
     Region          117..233
                     /region_name="PH-GRAM_MTMR14"
                     /note="Myotubularian (MTM) related 14 protein (MTMR14)
                     Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase
                     activators and Myotubularins (PH-GRAM) domain; cd13213"
                     /db_xref="CDD:275400"
     Region          <283..376
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..633
                     /gene="MTMR14"
                     /coded_by="XM_041462052.1:59..1960"
                     /db_xref="GeneID:121350604"
ORIGIN      
        1 maaaaargcp pagsgdrsla elllefsraq yrakdgggaa aakverierr clelfgrdyr
       61 ysvipnvhge vcahyprhiv llerdagasr dsyestvqvg klqdlinrsk marcrgrfvc
      121 pvilykgkhi crsatlagwg elygrtgyny ifsggsddaw adaediseed salrnadsql
      181 fdkvrghdik llrylsvryi cdlmvenkkv kfglnvtsse kvdkaqryad ftllsipypg
      241 ceffkdykdr dytaeglifn wkqdyvdapl sipvsltqsl nidwseyqsw dliqqtqnyl
      301 kllisiinsd ddsgllvhci sgwdrtplfi sllrlslwad glihtsleps eilyltvayd
      361 wflfghmlvd rlskgeeiff fcfnflkhit seefsalksq rrkslppgft leeicmlkqk
      421 drgsttslss dfslgmessp gaagsftyea velmpagaqa qaawrkscas spqavlwsra
      481 qqsedrlpst gmvevkssss sssthsdnfl rigssplevp rsrsadhslp gssvstdfgs
      541 wqmvtgcgsi reqailnada slpcsfpdef sntcllvsas dresrleevr saflasysrt
      601 iglkavppsp sgaigglleq fvrgvglrgs stl
//
LOCUS       XP_041317995             581 aa            linear   VRT 06-MAY-2021
DEFINITION  myotubularin-related protein 14 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041317995
VERSION     XP_041317995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="myotubularin-related protein 14 isoform X2"
                     /calculated_mol_wt=64498
     Region          117..233
                     /region_name="PH-GRAM_MTMR14"
                     /note="Myotubularian (MTM) related 14 protein (MTMR14)
                     Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase
                     activators and Myotubularins (PH-GRAM) domain; cd13213"
                     /db_xref="CDD:275400"
     Region          <283..376
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..581
                     /gene="MTMR14"
                     /coded_by="XM_041462061.1:43..1788"
                     /db_xref="GeneID:121350604"
ORIGIN      
        1 maaaaargcp pagsgdrsla elllefsraq yrakdgggaa aakverierr clelfgrdyr
       61 ysvipnvhge vcahyprhiv llerdagasr dsyestvqvg klqdlinrsk marcrgrfvc
      121 pvilykgkhi crsatlagwg elygrtgyny ifsggsddaw adaediseed salrnadsql
      181 fdkvrghdik llrylsvryi cdlmvenkkv kfglnvtsse kvdkaqryad ftllsipypg
      241 ceffkdykdr dytaeglifn wkqdyvdapl sipvsltqsl nidwseyqsw dliqqtqnyl
      301 kllisiinsd ddsgllvhci sgwdrtplfi sllrlslwad glihtsleps eilyltvayd
      361 wflfghmlvd rlskgeeiff fcfnflkhit seefsalksq rrkslppgft leeicmlkqk
      421 drgsttslss dfslgmessp gaagsftyea velmpagaqa qaawrkscas spqavlwsra
      481 qqsedrlpst gmvevkssss sssthsdnfl rigssplevp rsrlvsasdr esrleevrsa
      541 flasysrtig lkavppspsg aigglleqfv rgvglrgsst l
//
LOCUS       XP_041318007             611 aa            linear   VRT 06-MAY-2021
DEFINITION  copine-9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041318007
VERSION     XP_041318007.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462073.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..611
                     /product="copine-9 isoform X1"
                     /calculated_mol_wt=67405
     Region          17..139
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(32,38,92,94,105)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     Region          152..263
                     /region_name="C2B_Copine"
                     /note="C2 domain second repeat in Copine; cd04047"
                     /db_xref="CDD:176012"
     Site            order(167,173,229,231,237)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176012"
     Region          273..594
                     /region_name="vWA_copine_like"
                     /note="VWA Copine: Copines are phospholipid-binding
                     proteins originally identified in paramecium. They are
                     found in human and orthologues have been found in C.
                     elegans and Arabidopsis Thaliana. None have been found in
                     D. Melanogaster or S. Cereviciae; cd01459"
                     /db_xref="CDD:238736"
     Site            order(309,311,313,472,502)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238736"
     CDS             1..611
                     /gene="CPNE9"
                     /coded_by="XM_041462073.1:141..1976"
                     /db_xref="GeneID:121350616"
ORIGIN      
        1 maapgalepa agsvpgtkve ltvscrnlld mdtfsksdpv vvlfvqvsgs sewkefgrte
       61 vidntlnpdf vrkfvldyyf eekqnlrfdv ynvdskscsa lkqkdflgqa fvalgevigs
      121 qrgrlerplt gvpgkrcgti lllaeelsnc rdivtmqlca nkldkkdffg ksdpflvfyr
      181 snedgtftic hktevvkntl npvwqpftip vralcngdyd rtvkidvydw drdgshdfig
      241 efatsyrels raqsqftvye vlnprkkckk kkyvnsgtvt llsfsvesef tfvdyirggt
      301 qlnftvaidf tasnglpsqp tslhyaspyq lsayalalka vgeiiqdyds dklfpaygfg
      361 akvppdgkis hqfplvrppc etglrvnpdp wlwgraglgt ahsslagrgs tlatfcpsvp
      421 qpggqqelws ptkcpisipq nnnvenpsca giegvlesyl qslrtvqlyg ptnfapvinq
      481 vagiaaqvtd gsqyhvllii tdgvisdmlq tkeaivtass lpmsiiivgv gpaefeamee
      541 ldgdevrlss rgryaerdiv qfvpfrdyvd dsgnqvlsma rlakdvlaei peqllsymkt
      601 rdikprradp e
//
LOCUS       XP_041318018             546 aa            linear   VRT 06-MAY-2021
DEFINITION  copine-9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318018
VERSION     XP_041318018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..546
                     /product="copine-9 isoform X2"
                     /calculated_mol_wt=60557
     Region          17..139
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(32,38,92,94,105)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     Region          152..263
                     /region_name="C2B_Copine"
                     /note="C2 domain second repeat in Copine; cd04047"
                     /db_xref="CDD:176012"
     Site            order(167,173,229,231,237)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176012"
     Region          273..529
                     /region_name="vWA_copine_like"
                     /note="VWA Copine: Copines are phospholipid-binding
                     proteins originally identified in paramecium. They are
                     found in human and orthologues have been found in C.
                     elegans and Arabidopsis Thaliana. None have been found in
                     D. Melanogaster or S. Cereviciae; cd01459"
                     /db_xref="CDD:238736"
     Site            order(309,311,313,407,437)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238736"
     CDS             1..546
                     /gene="CPNE9"
                     /coded_by="XM_041462084.1:141..1781"
                     /db_xref="GeneID:121350616"
ORIGIN      
        1 maapgalepa agsvpgtkve ltvscrnlld mdtfsksdpv vvlfvqvsgs sewkefgrte
       61 vidntlnpdf vrkfvldyyf eekqnlrfdv ynvdskscsa lkqkdflgqa fvalgevigs
      121 qrgrlerplt gvpgkrcgti lllaeelsnc rdivtmqlca nkldkkdffg ksdpflvfyr
      181 snedgtftic hktevvkntl npvwqpftip vralcngdyd rtvkidvydw drdgshdfig
      241 efatsyrels raqsqftvye vlnprkkckk kkyvnsgtvt llsfsvesef tfvdyirggt
      301 qlnftvaidf tasnglpsqp tslhyaspyq lsayalalka vgeiiqdyds dklfpaygfg
      361 akvppdgkis hqfplnnnve npscagiegv lesylqslrt vqlygptnfa pvinqvagia
      421 aqvtdgsqyh vlliitdgvi sdmlqtkeai vtasslpmsi iivgvgpaef eameeldgde
      481 vrlssrgrya erdivqfvpf rdyvddsgnq vlsmarlakd vlaeipeqll symktrdikp
      541 rradpe
//
LOCUS       XP_041318029             515 aa            linear   VRT 06-MAY-2021
DEFINITION  copine-9 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041318029
VERSION     XP_041318029.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462095.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="copine-9 isoform X3"
                     /calculated_mol_wt=56787
     Region          <9..43
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          56..167
                     /region_name="C2B_Copine"
                     /note="C2 domain second repeat in Copine; cd04047"
                     /db_xref="CDD:176012"
     Site            order(71,77,133,135,141)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176012"
     Region          177..498
                     /region_name="vWA_copine_like"
                     /note="VWA Copine: Copines are phospholipid-binding
                     proteins originally identified in paramecium. They are
                     found in human and orthologues have been found in C.
                     elegans and Arabidopsis Thaliana. None have been found in
                     D. Melanogaster or S. Cereviciae; cd01459"
                     /db_xref="CDD:238736"
     Site            order(213,215,217,376,406)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238736"
     CDS             1..515
                     /gene="CPNE9"
                     /coded_by="XM_041462095.1:609..2156"
                     /db_xref="GeneID:121350616"
ORIGIN      
        1 mphgdwqkdf lgqafvalge vigsqrgrle rpltgvpgkr cgtilllaee lsncrdivtm
       61 qlcankldkk dffgksdpfl vfyrsnedgt ftichktevv kntlnpvwqp ftipvralcn
      121 gdydrtvkid vydwdrdgsh dfigefatsy relsraqsqf tvyevlnprk kckkkkyvns
      181 gtvtllsfsv eseftfvdyi rggtqlnftv aidftasngl psqptslhya spyqlsayal
      241 alkavgeiiq dydsdklfpa ygfgakvppd gkishqfplv rppcetglrv npdpwlwgra
      301 glgtahssla grgstlatfc psvpqpggqq elwsptkcpi sipqnnnven pscagiegvl
      361 esylqslrtv qlygptnfap vinqvagiaa qvtdgsqyhv lliitdgvis dmlqtkeaiv
      421 tasslpmsii ivgvgpaefe ameeldgdev rlssrgryae rdivqfvpfr dyvddsgnqv
      481 lsmarlakdv laeipeqlls ymktrdikpr radpe
//
LOCUS       XP_041318040             432 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional adapter 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041318040
VERSION     XP_041318040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="transcriptional adapter 3"
                     /calculated_mol_wt=48702
     Region          309..422
                     /region_name="Ada3"
                     /note="Histone acetyltransferases subunit 3; pfam10198"
                     /db_xref="CDD:462993"
     CDS             1..432
                     /gene="TADA3"
                     /coded_by="XM_041462106.1:351..1649"
                     /db_xref="GeneID:121350627"
ORIGIN      
        1 mselkdcplq fhdfksvdhv kvcprytavl arseddgigi eeldtlqlel etllssasrr
       61 lrvleaetqi ltdwqdkkgd rrflklskdh dvgtsvkhgk pkkqklegkg ghgtgpgpgr
      121 pksknlqpki qeyefqddpi dvpripknda pnrfwasvep ycadltneev rvleellkpp
      181 edeaehykip plgkhysqrw aqedlleeqk dgaraaaaad kkkgvlgplt eldtkdvdal
      241 lkkseaqheq pedgcpfgpl tqrllqalve eniispveds pipeitgkds gadgagtspr
      301 sqnkpfsvph tkslegrike elvaqglles edrpaedsed evlaelrkrq aelkalsahn
      361 rtkkhellrl akeelhrqel rqrvrmadne vmdafrkima arqkkrtptk kekdqawktl
      421 keresilkll dg
//
LOCUS       XP_041318053             365 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318053
VERSION     XP_041318053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462119.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..365
                     /product="calcium/calmodulin-dependent protein kinase type
                     1"
                     /calculated_mol_wt=40694
     Region          17..279
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(27..30,33,35,48,50,80,96..99,142,146..147,149,
                     162..163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271069"
     CDS             1..365
                     /gene="CAMK1"
                     /coded_by="XM_041462119.1:101..1198"
                     /db_xref="GeneID:121350635"
ORIGIN      
        1 mplgqdgpsw kkriediqri ydfrdvlgtg afsevvlaee katrklvaik ciakkalegk
       61 etsieneiav lhkikhpniv alddiyesgt hlylimqlvs ggelfdrive kgfyterdas
      121 alirqildav kylhdmgivh rdlkpenlly ysmdedskim isdfglskie gcgsvmstac
      181 gtpgyvapev laqkpyskav dcwsigviay illcgyppfy dendaklfeq ilqaeyefds
      241 pywddisdsa kdfiqhlmek dpgkrftceq alqhpwiagd taldknihqs vseqikknfa
      301 kskwkqafna tavvrhmrkl qlgtsqdipg qttptspgeq lvggtsngse cgrpptsraq
      361 rlppd
//
LOCUS       XP_041318066             338 aa            linear   VRT 06-MAY-2021
DEFINITION  N-glycosylase/DNA lyase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041318066
VERSION     XP_041318066.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462132.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..338
                     /product="N-glycosylase/DNA lyase isoform X1"
                     /calculated_mol_wt=36965
     Region          14..328
                     /region_name="ogg"
                     /note="8-oxoguanine DNA-glycosylase (ogg); TIGR00588"
                     /db_xref="CDD:211589"
     CDS             1..338
                     /gene="OGG1"
                     /coded_by="XM_041462132.1:26..1042"
                     /db_xref="GeneID:121350642"
ORIGIN      
        1 mklrdapsvc pslwrwlpcp paelrldlvl ssgqsfrwwe sspgawtgvl ggrvwtlrqd
       61 gdrlwytvyg eeeeegdecp akaaklnaae tdrilrdyfq ldvglsalyh awgaadplfr
      121 kvandfpgvr vlrqdpvecl fsfictsnnh isritamier lcqafgrhlc cldsrpfhaf
      181 pslsaltgad aearlralgf gyrakfvsgs araiaeglgp eglcqlrtap yaearrvlca
      241 lpgvgakvad cvcllsldka eavpvdthvw hiaqqrygva lggksltpra yqeigvhpls
      301 agdffrglwg pragwaqavl fcadlrkgqk pagsqhqa
//
LOCUS       XP_041318075             331 aa            linear   VRT 06-MAY-2021
DEFINITION  N-glycosylase/DNA lyase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318075
VERSION     XP_041318075.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462141.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="N-glycosylase/DNA lyase isoform X2"
                     /calculated_mol_wt=36304
     Region          14..321
                     /region_name="ogg"
                     /note="8-oxoguanine DNA-glycosylase (ogg); TIGR00588"
                     /db_xref="CDD:211589"
     CDS             1..331
                     /gene="OGG1"
                     /coded_by="XM_041462141.1:26..1021"
                     /db_xref="GeneID:121350642"
ORIGIN      
        1 mklrdapsvc pslwrwlpcp paelrldlvl ssgqsfrwwe sspgawtgvl ggrvwtlrqd
       61 gdrlwytvyg eeeeegdecp akaaklnaae tdrilrdyfq ldvglsalyh awgaadplfr
      121 kvandfpgvr vlrqdpvecl fsfictsnnh isritamier lcqafgrhlc cldsrpfhaf
      181 pslsaltgad aearlralgf gyrakfvsgs araiaeglgp eglcqlrtap yaearrvlca
      241 lpgvgakvad cvcllsldka eavpvdthvw hiaqqrygva lggksltpra yqeigdffrg
      301 lwgpragwaq avlfcadlrk gqkpagsqhq a
//
LOCUS       XP_041318088             167 aa            linear   VRT 06-MAY-2021
DEFINITION  chemokine-like protein TAFA-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041318088
VERSION     XP_041318088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462154.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..167
                     /product="chemokine-like protein TAFA-4"
                     /calculated_mol_wt=18740
     Region          72..159
                     /region_name="TAFA"
                     /note="TAFA family; pfam12020"
                     /db_xref="CDD:432266"
     CDS             1..167
                     /gene="TAFA4"
                     /coded_by="XM_041462154.1:44..547"
                     /db_xref="GeneID:121350653"
ORIGIN      
        1 mgiwnnyekh teiivfdwnk ilaksprmrf caksmllsdw lfllyvlmvc ckllsasshh
       61 prghtgqhqv kqgtcevvav hrccnknrie ersqtvkcsc fpgqvagttr aqpscveasi
      121 vlqkwwchmn pcldgedckv lpdysgwscs sgnkvkttka steitci
//
LOCUS       XP_041318103             574 aa            linear   VRT 06-MAY-2021
DEFINITION  selenocysteine-specific elongation factor isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318103
VERSION     XP_041318103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..574
                     /product="selenocysteine-specific elongation factor
                     isoform X1"
                     /calculated_mol_wt=62709
     Region          8..196
                     /region_name="SelB_euk"
                     /note="SelB, the dedicated elongation factor for delivery
                     of selenocysteinyl-tRNA to the ribosome; cd01889"
                     /db_xref="CDD:206676"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206676"
     Site            order(15,17,21..22,25,28..29,52..53,81..82,105..106,143,
                     147)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206676"
     Site            order(17..22,131..132,134,170..172)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206676"
     Site            37..52
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206676"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206676"
     Site            77..80
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206676"
     Site            79..97
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206676"
     Site            131..134
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206676"
     Site            170..172
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206676"
     Region          209..291
                     /region_name="SelB_II"
                     /note="Domain II of elongation factor SelB; cd03696"
                     /db_xref="CDD:293897"
     Region          296..430
                     /region_name="eSelB_III"
                     /note="Domain III of eukaryotic and archaeal elongation
                     factor SelB; cd04094"
                     /db_xref="CDD:294009"
     CDS             1..574
                     /gene="EEFSEC"
                     /coded_by="XM_041462169.1:22..1746"
                     /db_xref="GeneID:121350658"
ORIGIN      
        1 maarvlnvnv gvlghidsgk talaralstt gstaafdrap qsrargitld lgfsclrtal
       61 ppqlgpgpge lqltlvdcpg haslirtiig gaqiidlmml vidvtkgmqt qsaeclvigq
      121 iacqkmvvvl nkidllpegk rqsaiekmtk kmqktlentk fsgcpivava akpggpeape
      181 senpqgisel ievlksqayl psrdpsghfl mavdhcfsik gqgtvmtgti lsgsvslgdn
      241 veipalkvtk rvksmqmfht pvtyamqgdr vgvcvtqfdp kllerglict pdslhtihaa
      301 iislkkiqyf rgalqtkakf hitvghetvm grvmffspap adfneeiqen efdfekdyly
      361 qeqylskdsv sseenkendq tgevqlpkqq wallefekpv tcpklclvig skldtdihan
      421 tcrlafhgvl lqgmedknya etslpklkvy kqkhkegqve rvmddysvig rslfkketni
      481 qifvglkvkl stgedgiidg gfgqsgkfki ripdglkpdt kmlltaaskk kskggkgdmt
      541 kedessknds aqpvtislif kryvfdtqkk miqs
//
LOCUS       XP_041318111             477 aa            linear   VRT 06-MAY-2021
DEFINITION  selenocysteine-specific elongation factor isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318111
VERSION     XP_041318111.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462177.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="selenocysteine-specific elongation factor
                     isoform X2"
                     /calculated_mol_wt=52812
     Region          <1..99
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            34..37
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            73..75
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          112..194
                     /region_name="SelB_II"
                     /note="Domain II of elongation factor SelB; cd03696"
                     /db_xref="CDD:293897"
     Region          199..333
                     /region_name="eSelB_III"
                     /note="Domain III of eukaryotic and archaeal elongation
                     factor SelB; cd04094"
                     /db_xref="CDD:294009"
     CDS             1..477
                     /gene="EEFSEC"
                     /coded_by="XM_041462177.1:214..1647"
                     /db_xref="GeneID:121350658"
ORIGIN      
        1 mmlvidvtkg mqtqsaeclv igqiacqkmv vvlnkidllp egkrqsaiek mtkkmqktle
       61 ntkfsgcpiv avaakpggpe apesenpqgi selievlksq aylpsrdpsg hflmavdhcf
      121 sikgqgtvmt gtilsgsvsl gdnveipalk vtkrvksmqm fhtpvtyamq gdrvgvcvtq
      181 fdpkllergl ictpdslhti haaiislkki qyfrgalqtk akfhitvghe tvmgrvmffs
      241 papadfneei qenefdfekd ylyqeqylsk dsvsseenke ndqtgevqlp kqqwallefe
      301 kpvtcpklcl vigskldtdi hantcrlafh gvllqgmedk nyaetslpkl kvykqkhkeg
      361 qvervmddys vigrslfkke tniqifvglk vklstgedgi idggfgqsgk fkiripdglk
      421 pdtkmlltaa skkkskggkg dmtkedessk ndsaqpvtis lifkryvfdt qkkmiqs
//
LOCUS       XP_041318123            1106 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA element modulatory factor [Pyrgilauda ruficollis].
ACCESSION   XP_041318123
VERSION     XP_041318123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462189.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1106
                     /product="TATA element modulatory factor"
                     /calculated_mol_wt=123293
     Region          <88..252
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          <425..>932
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          986..1100
                     /region_name="TMF_TATA_bd"
                     /note="TATA element modulatory factor 1 TATA binding;
                     pfam12325"
                     /db_xref="CDD:432481"
     CDS             1..1106
                     /gene="TMF1"
                     /coded_by="XM_041462189.1:151..3471"
                     /db_xref="GeneID:121350670"
ORIGIN      
        1 mswfnasqls sfakqalsqa qksidrvldi qaeetpwpda vipdygdgtn slisggwdts
       61 swglnsttep qnqpvsptai tkpvrrtvvd esenffsafl sptdvqsiqk npvvskppak
      121 sqrpkeevks tlkesqhssq legpvtaeae vkdssvadld lksldipeek leenavlksd
      181 aqheastnev tdkkvsalnf eepedspsek ssvvgdgaag apegtsqplg agtkdlaleg
      241 kerktedrqs ntpsppistf ssgtsttsdi evldhesvis essvssrqea adsksslhlm
      301 qtsfqllsts acadynrldd fqkmtescgs sdaferidsf svqsldsrsv seinsddels
      361 grasasasva vspsvpktet vdalknksen lndasvlhae eaemeesgrs atpvnseqpd
      421 vvlvaavqtv egqvvkeeae pqqdageqlv eedtekqelk kmidsltekl ekreiqllst
      481 skerarleea ydnlkdemfr mkeessslss lkeefaqria daekklqlac kerdaakkev
      541 ktvkeelatr lntnetaell kekeeqikgl meegeklskq qlqnsniikk lrakekeren
      601 intkqnkkik eleeelqhlk qvldgkedle kqhrdsikql nsvverqekd ltklqaevqe
      661 leernrsvqa aldsaykela dlhkanatkd seaqeaalsr emkakeelgl alekaqeear
      721 qqqealaiqv adlrlalqra eqqaarkedy lrqeigelqq rlqeaesrnq elsqsvtsat
      781 rpllrqienl qatlgaqtsa wekleknlsd rlgesqtlla aaaereraat eellankiqm
      841 sssesqnsll rqentrlqaq levernklkk menensryev eleglkdeya ktledakkek
      901 allatqleme kmkveqerkk avlvqeaake kdrksftvet vsstpsmsrs ssisgvdmag
      961 lqtsflsqdd phdhsfgpia tsgsnlydai rmgsgssiie nlqsqlklre geishlqlei
     1021 gnlektrsim aeelvkltnq ndeleekvke itklrtqlkd ldqryntilq mygekaeeae
     1081 elrldledvk nmyktqidel lkqrqn
//
LOCUS       XP_041318137             453 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane prolyl 4-hydroxylase [Pyrgilauda ruficollis].
ACCESSION   XP_041318137
VERSION     XP_041318137.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462203.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="transmembrane prolyl 4-hydroxylase"
                     /calculated_mol_wt=50491
     Region          139..200
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     Region          194..406
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..453
                     /gene="P4HTM"
                     /coded_by="XM_041462203.1:1..1362"
                     /db_xref="GeneID:121350677"
ORIGIN      
        1 mhceellamd gglgrgggap vavpargrcp rpavtqrage pggppaappp ppppparalp
       61 rlegikvght qrvelvpgra havrtlslkp llfeipdflt eeecklivhl aklkglqksq
      121 ilptedyeea memieisqmd ifnlldhnqd gqlqlkevlt htrlgngrwm tpesiremyt
      181 avkadpdgng vlsleefkql nirdfhkymg sqkvkmsdlv rnsqhtwlyq gegahqvmra
      241 irqrvmrltr lppeivehse plqvvrydqg ghyhahmdsg pvfpetacsh tklvanesap
      301 fetscryvtv lfylnnvtgg getvfpiadn rtyeemsliq ndidlrdtrk ncdkgnlrvk
      361 pqqgtavfwy nylsdgegwv gelddfalhg gclvtqgtkw iannwinvdp nrrrqqqfqq
      421 emerfagsea gpgagapgew tvdkaysgvh lel
//
LOCUS       XP_041318150             963 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318150
VERSION     XP_041318150.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462216.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..963
                     /product="WD repeat-containing protein 6"
                     /calculated_mol_wt=102444
     Region          2..362
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          31..72
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          281..333
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          371..415
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          418..778
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(418,435,439,445..446,458,481,486,491..492,507..508,
                     522,527,533..534,550,575,580,586..587,603..604,633,637,
                     643..644,671..672,714,718,724..725,737,742,767,771,
                     777..778)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          423..456
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          641..694
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          710..>907
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          747..812
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          816..864
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          877..913
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..963
                     /gene="WDR6"
                     /coded_by="XM_041462216.1:367..3258"
                     /db_xref="GeneID:121350684"
ORIGIN      
        1 malgggtval yewwgggrwl rqascagaga lrcavlagvs wgrlalaagt atgnvmvwra
       61 aaatapqrql cghrgavlal cyaasrglla sasedrsvrl wavgelgggd gagacllvcy
      121 ghgarvaavv lrgplpvsag edgaclewgg gggvrrarrr vatggddggv rlwqprreav
      181 pavaalgaqe rpravllvgp rrvlvldeag glaafevaqg rwtpvlhpaa sgpravlaaa
      241 plhgwdetlc avaggdgrll lfalsrpgaa akltlfegav hglswaprpg lppdtaapll
      301 asgpdgemlw ldvthrpgqa pwvqlmgryl lppckqrwht catflpqerl lvcgdrrgsl
      361 llfpcssssg waaegtsivn gstdpvveds rnelepscll hkgalplesp lsvlfglhgk
      421 tgvtsvtths gyiystgrdg vyrqlrlrdq qlevlqkhrp ckglqwieel rftsdgdllv
      481 lgfhadnfvv wssrtgenih cipcggghrs wsycssplae vfafiksgdv mlyhreaepc
      541 eqqvllaslh greitcvrrl galevpghat vnvfvtgsed ttacvlvlse ssraavplar
      601 lsdhissvrt lafamgpgde gfgdeglsal lfsaggraqi ecyrllctgd tvaqsavacq
      661 vihvashrld khwekkknrh klvkmdpetr ymslsvvpgt stkqlptpwk flaaacsdgs
      721 vrifglleaa rklvlvaesf hhqrcvlkve aflhtwagge rrhllcsaat dgsiafwdis
      781 gtimdaadal hqaeeemqpl aldaplvtim ahscgvnslh iretpegryl vasgsddgsi
      841 hvcllevalg rgeatagtcl qvlervsrpc ahaahvtgir vlrpdlllsa svdqrltlwk
      901 lcpgelvpls ttffhvpdla eldcwevlea ggelryycvl cgqglemlcg tasskpppqe
      961 apq
//
LOCUS       XP_041318162            1827 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit beta-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041318162
VERSION     XP_041318162.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462228.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1827
                     /product="laminin subunit beta-2-like"
                     /calculated_mol_wt=200091
     Region          33..263
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); pfam00055"
                     /db_xref="CDD:459653"
     Region          264..318
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(265,267,286,293,295,304)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          329..380
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(330,332,339,357,360,369)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          393..450
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(393,395,406,421,423,432)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          452..503
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(453,455,467,474,476,485)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          504..>543
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(505,507,517,524,526,535)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          817..862
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(817,819,829,836,838,847)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          865..913
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(865,867,877,884,886,895)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          911..958
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(911,913,920,927,930,939)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Site            order(961,963,977,988,990,999)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          <987..1017
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Region          1020..1064
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1020,1022,1034,1041,1044,1053)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1072..1130
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1072,1074,1084,1098,1100,1109)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1128..1176
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1128,1130,1140,1147,1149,1158)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1176..1220
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(1176,1178,1188,1195,1197,1206)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1237..1740
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          <1582..>1825
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1758..1827
                     /region_name="cc_LAMB_C"
                     /note="C-terminal coiled-coil domain found in the laminin
                     subunit beta (LAMB) family; cd22295"
                     /db_xref="CDD:411969"
     Site            order(1760..1761,1764..1765,1767..1768,1771,1778..1779,
                     1781..1782,1785,1788..1789,1792..1793,1795..1797,
                     1799..1800,1803,1806..1807,1809..1811,1813..1814,
                     1816..1818,1820..1822,1824..1827)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:411969"
     CDS             1..1827
                     /gene="LOC121350693"
                     /coded_by="XM_041462228.1:1..5484"
                     /db_xref="GeneID:121350693"
ORIGIN      
        1 mdllvlafll vgglvaggwq epdlshgcar gscypatgnl lvgratrlsa tstcgldgpq
       61 eycivshlqd sekcftcdsr dpslpeshri enviylssph ekrtwwqsen gvehvsirld
      121 legefhfthl imkfktfrpa amlversadf ghtwkvyryf ayncsklfpg ipshalglvd
      181 evlcdqryse iepsshgevi fkvldpsipv adpyspaiqd llrvtnlrvn ltklhtlgdn
      241 lldsrrevlh kyyyavdelv lrgscfchgh aahcapapga ptpsvpgmih grcvcehhtq
      301 glncercedf yhdlpwrpae gsstnacrrc dcnehsrrch fdmavflatg ntsgavcddc
      361 qhntmgrrch lckpfyyrhp rsdirsptac apcdcdpags ldggacdght dvalgmiagq
      421 crckenvagp rcdrcrhgay glshddpqgc qpcrcdprgt vagsspcdpi sgdcyckrfv
      481 agrscsqcvp efwglsydlg gcrpcacdfg gaynnrcsme dgacpcrphi mgrqcdqvqp
      541 gffcapldyy tyeaeqatgh ghshpqlpga irvevpqdcl eydtrepagr kgrsrrqrsp
      601 lrapqppvpp rrsrqqppkl dveevvrdsa grmvtwtglg farvrdgagl tfrvdnvpyp
      661 mdyelllrye pesaedweav vsvssqvlpt ssrcgnllps eqmyrqslph sqryvllsrp
      721 fcfepstpye vtmrlqragv tqrhpgafil idslvllprv selpgfhgae aaarqeeler
      781 yqclevfrma pphplaeaca rlvcsvsalm hggalpcqcd pqgsrssecq vqggqceckp
      841 hvtgrrcdhc apgsfgfgpl gcspctcspe gsvsqlcdkv sgqcrcqpgt vgrqcdqcqp
      901 ghwgfpacrp cqcnghaeec dprtgtclrc rdhtsgrhce rcqdgyygnp vlgsgqqcrp
      961 cpcpgypgtr nyhgsachad dethhivclc apgyagprcd rcspgyfgap emeggecrpc
     1021 qcnnnidtsd pegcdprtgq clrclyhtag prcaqcqpgy ygnalqrscr rcgcdprgtl
     1081 ashctdgtcd cdrgtgacac rpnvvgkscd rcaphfwnlg gprgcepcgc hpihalhpac
     1141 dtvtgqcqcr pgfggrvcsq cqehhwgdpe qecracecep lgaespqceq dngqcrcrlg
     1201 fgglrcdrcq rgyqepfphc spchpcfgrw dlavgslreg lqrlgaqvqa lregssalpl
     1261 sprrlrelee alghveqllg erdssrgpll dglprqldgt rmeldnfwkh lqeleqhldq
     1321 laqadmqhhd rlaelsrelg dlnrttshlq illgtvaaag fsesyrsila steasrqaev
     1381 vangtagels raqmtqrate ralqqrgdtf rrgtaaarks lretqkrvmg lsiarineki
     1441 cgapgdrsck hascggalcr dsagtrhcgg vgcagalpis aralssahna sqqlevalgq
     1501 lgvvaqkmqe vqelargars raeealgrsq aarsraekat aqlrdfirri kaflaeegad
     1561 pgsielvarq vlnislpssp gqiqelllem resisqlegv davlnstaeg lavardllaq
     1621 gqeareraeg irdelagtqq alevartqam tagsalqrar naiqvaenra reaerrlqvl
     1681 drkesqaqrr lrelaqriat lqehgrdarh maqqakdgaq rstatsgtls qdlaqvtqry
     1741 vvlknrvgml drvsggalqr vsqlmaevqd lldkasnskr kledleqrfg anertmaakv
     1801 trlqaleqqv tgllqeirer anayatc
//
LOCUS       XP_041318173             674 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal acyl-coenzyme A oxidase 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318173
VERSION     XP_041318173.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462239.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..674
                     /product="peroxisomal acyl-coenzyme A oxidase 2 isoform
                     X1"
                     /calculated_mol_wt=75292
     Region          20..649
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(121,151,153,191,193,435..437,439,441)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..674
                     /gene="ACOX2"
                     /coded_by="XM_041462239.1:379..2403"
                     /db_xref="GeneID:121350699"
ORIGIN      
        1 malleaskhs egsvlgsvnp dlagerqtas fsvekltall dggaeqtrir ravveaiesd
       61 pvfsrenqyf qtqneryeaa vrkavhlqkk mhemgwteng peykyiyral sgdvafllhr
      121 vfmrsisvlg sdkqiakwip latqhkligs yaqtelghgt ylqglettav fdtatqefil
      181 ntpkisamkw wpgdmgrsat htvvfaqlyi hgkcygihpf ivqirslqdh slcpgvtagd
      241 igpkmnfehi dngylllknv rvprenmlsk fcevrpdgty vrqgsqkiny ftmttvrisl
      301 isdevltplm kactiairys vvrrqsklkp geqeakildy qtqqekllpq laaayafhft
      361 ndylqelfnr gyreiqrknf dmlpelhals sgfkavitqh ctagveiclr acgghgysll
      421 sglpslytki lasciyegen tilllqtarf likcfmaasa gqpvppsvty laavkhgkcp
      481 aknkldflsp diyteayqhv avrltsstaa klqdliqsgv kkhdawnqct vqlvqaakah
      541 chyiavknfa etvekletka giqkimkhlc dlfalhgifs ntgaflhdgy tsaaqmdmvt
      601 asyldllavi rkdavplvda fdftdqslns algsydgqvy qrlyewaqks ptnqmspaye
      661 rylkpllhnt lskl
//
LOCUS       XP_041318182             674 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal acyl-coenzyme A oxidase 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318182
VERSION     XP_041318182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..674
                     /product="peroxisomal acyl-coenzyme A oxidase 2 isoform
                     X1"
                     /calculated_mol_wt=75292
     Region          20..649
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(121,151,153,191,193,435..437,439,441)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..674
                     /gene="ACOX2"
                     /coded_by="XM_041462248.1:363..2387"
                     /db_xref="GeneID:121350699"
ORIGIN      
        1 malleaskhs egsvlgsvnp dlagerqtas fsvekltall dggaeqtrir ravveaiesd
       61 pvfsrenqyf qtqneryeaa vrkavhlqkk mhemgwteng peykyiyral sgdvafllhr
      121 vfmrsisvlg sdkqiakwip latqhkligs yaqtelghgt ylqglettav fdtatqefil
      181 ntpkisamkw wpgdmgrsat htvvfaqlyi hgkcygihpf ivqirslqdh slcpgvtagd
      241 igpkmnfehi dngylllknv rvprenmlsk fcevrpdgty vrqgsqkiny ftmttvrisl
      301 isdevltplm kactiairys vvrrqsklkp geqeakildy qtqqekllpq laaayafhft
      361 ndylqelfnr gyreiqrknf dmlpelhals sgfkavitqh ctagveiclr acgghgysll
      421 sglpslytki lasciyegen tilllqtarf likcfmaasa gqpvppsvty laavkhgkcp
      481 aknkldflsp diyteayqhv avrltsstaa klqdliqsgv kkhdawnqct vqlvqaakah
      541 chyiavknfa etvekletka giqkimkhlc dlfalhgifs ntgaflhdgy tsaaqmdmvt
      601 asyldllavi rkdavplvda fdftdqslns algsydgqvy qrlyewaqks ptnqmspaye
      661 rylkpllhnt lskl
//
LOCUS       XP_041318191             674 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal acyl-coenzyme A oxidase 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318191
VERSION     XP_041318191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..674
                     /product="peroxisomal acyl-coenzyme A oxidase 2 isoform
                     X1"
                     /calculated_mol_wt=75292
     Region          20..649
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(121,151,153,191,193,435..437,439,441)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..674
                     /gene="ACOX2"
                     /coded_by="XM_041462257.1:241..2265"
                     /db_xref="GeneID:121350699"
ORIGIN      
        1 malleaskhs egsvlgsvnp dlagerqtas fsvekltall dggaeqtrir ravveaiesd
       61 pvfsrenqyf qtqneryeaa vrkavhlqkk mhemgwteng peykyiyral sgdvafllhr
      121 vfmrsisvlg sdkqiakwip latqhkligs yaqtelghgt ylqglettav fdtatqefil
      181 ntpkisamkw wpgdmgrsat htvvfaqlyi hgkcygihpf ivqirslqdh slcpgvtagd
      241 igpkmnfehi dngylllknv rvprenmlsk fcevrpdgty vrqgsqkiny ftmttvrisl
      301 isdevltplm kactiairys vvrrqsklkp geqeakildy qtqqekllpq laaayafhft
      361 ndylqelfnr gyreiqrknf dmlpelhals sgfkavitqh ctagveiclr acgghgysll
      421 sglpslytki lasciyegen tilllqtarf likcfmaasa gqpvppsvty laavkhgkcp
      481 aknkldflsp diyteayqhv avrltsstaa klqdliqsgv kkhdawnqct vqlvqaakah
      541 chyiavknfa etvekletka giqkimkhlc dlfalhgifs ntgaflhdgy tsaaqmdmvt
      601 asyldllavi rkdavplvda fdftdqslns algsydgqvy qrlyewaqks ptnqmspaye
      661 rylkpllhnt lskl
//
LOCUS       XP_041318200             552 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal acyl-coenzyme A oxidase 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318200
VERSION     XP_041318200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..552
                     /product="peroxisomal acyl-coenzyme A oxidase 2 isoform
                     X2"
                     /calculated_mol_wt=61536
     Region          3..527
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(29,31,69,71,313..315,317,319)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..552
                     /gene="ACOX2"
                     /coded_by="XM_041462266.1:180..1838"
                     /db_xref="GeneID:121350699"
ORIGIN      
        1 mrsisvlgsd kqiakwipla tqhkligsya qtelghgtyl qglettavfd tatqefilnt
       61 pkisamkwwp gdmgrsatht vvfaqlyihg kcygihpfiv qirslqdhsl cpgvtagdig
      121 pkmnfehidn gylllknvrv prenmlskfc evrpdgtyvr qgsqkinyft mttvrislis
      181 devltplmka ctiairysvv rrqsklkpge qeakildyqt qqekllpqla aayafhftnd
      241 ylqelfnrgy reiqrknfdm lpelhalssg fkavitqhct agveiclrac gghgysllsg
      301 lpslytkila sciyegenti lllqtarfli kcfmaasagq pvppsvtyla avkhgkcpak
      361 nkldflspdi yteayqhvav rltsstaakl qdliqsgvkk hdawnqctvq lvqaakahch
      421 yiavknfaet vekletkagi qkimkhlcdl falhgifsnt gaflhdgyts aaqmdmvtas
      481 yldllavirk davplvdafd ftdqslnsal gsydgqvyqr lyewaqkspt nqmspayery
      541 lkpllhntls kl
//
LOCUS       XP_041318211             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318211
VERSION     XP_041318211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462277.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462277.1:225..938"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318220             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318220
VERSION     XP_041318220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462286.1:1467..2180"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318231             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318231
VERSION     XP_041318231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462297.1:1380..2093"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318239             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318239
VERSION     XP_041318239.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462305.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462305.1:935..1648"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318249             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318249
VERSION     XP_041318249.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462315.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462315.1:941..1654"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318259             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318259
VERSION     XP_041318259.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462325.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462325.1:345..1058"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318269             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318269
VERSION     XP_041318269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462335.1:621..1334"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318274             237 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318274
VERSION     XP_041318274.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462340.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="BTB/POZ domain-containing protein KCTD6"
                     /calculated_mol_wt=27512
     Region          10..113
                     /region_name="BTB_POZ_KCTD6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 6
                     (KCTD6); cd18394"
                     /db_xref="CDD:349702"
     CDS             1..237
                     /gene="KCTD6"
                     /coded_by="XM_041462340.1:1428..2141"
                     /db_xref="GeneID:121350719"
ORIGIN      
        1 mdngdwgymm tdpvtlnvgg hmyttslttl trypdsmlga mfrgdfptar dsqgnyfidr
       61 dgplfryvln flrtseltlp ldfkefdllr keadfyqiep liqclndpkp lypvdtfeev
      121 velsstrkls kysnpvavii tqltittkvh allegisnhf tkwnkhmmdt rdcqvsftfg
      181 pcdyhqevsl rvhlmeyitk qgftirntrv hhmseranen tvehnwtfcr larktdd
//
LOCUS       XP_041318288             167 aa            linear   VRT 06-MAY-2021
DEFINITION  actin-associated protein FAM107A [Pyrgilauda ruficollis].
ACCESSION   XP_041318288
VERSION     XP_041318288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..167
                     /product="actin-associated protein FAM107A"
                     /calculated_mol_wt=19315
     Region          49..156
                     /region_name="DUF1151"
                     /note="Protein of unknown function (DUF1151); pfam06625"
                     /db_xref="CDD:461966"
     CDS             1..167
                     /gene="FAM107A"
                     /coded_by="XM_041462354.1:369..872"
                     /db_xref="GeneID:121350740"
ORIGIN      
        1 mswgtgqrlp pglpraslrk sasmyteiqr erpdggnilt hpdyidgnpd likpkkllnp
       61 vkaskshqel hrellmnhkr glgvdskpel qrvlehrrrd llikqkkeee eakklqspfe
      121 kellkrhqrl dqlekeqekq edhapefikv kenlrrtstv tgdekaa
//
LOCUS       XP_041318302             572 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: PX domain-containing protein kinase-like
            protein [Pyrgilauda ruficollis].
ACCESSION   XP_041318302
VERSION     XP_041318302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462368.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..572
                     /product="LOW QUALITY PROTEIN: PX domain-containing
                     protein kinase-like protein"
                     /calculated_mol_wt=64282
     Region          13..132
                     /region_name="PX_MONaKA"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Modulator of Na,K-ATPase; cd06871"
                     /db_xref="CDD:132781"
     Site            order(55..57,78..79,92)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132781"
     Region          198..345
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Region          540..569
                     /region_name="WH2_DdVASP-like"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) found in Dictyostelium discoideum
                     Vasodilator-stimulated phosphoprotein (VASP) and similar
                     proteins; cd22062"
                     /db_xref="CDD:409205"
     Site            order(542..543,545..547,549..551,558..561)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409205"
     Region          558..561
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409205"
     CDS             1..572
                     /gene="PXK"
                     /coded_by="XM_041462368.1:106..1824"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121350745"
ORIGIN      
        1 mafmekppag kvllddtvpl taqieasqsl hshteyiirv qrgvstensw qivrrysdfd
       61 llnnslqist lslplppkkl ignmerefia erqkglqayl dvitthhils ncelvkkfld
      121 pnsysvnyte ialqhvsmff rsepkwevve plkdigwrir kkyflmkikn qpkerlvlsw
      181 adlgpdkyls drdlqyavrl lsscshpyiy kitfatanes salvirpfse kgtlkdliyk
      241 akpkdpflkk ycnpkkiqgl elqqiktygr qilevlkflh ekgfpyghlh sanvmldgdt
      301 cklldlensl lglpsfyrsy fsqfrkintl egvdvhcfgh llyemtygrp pdtipvesfp
      361 papsvfvvsv lesiltceal kngmptvsrl lqmplfsdvl ltnsekpqfk iptklkealk
      421 iskeciekrl teeqklihqh rrltraqshh gseeekkkrk ilarkkskrs anesgeehsa
      481 kysnsnnsgs gasspltsps sptppstaga ssippapppp pppaapppst eaptarpdvs
      541 asrgallssi qnfqkgtlkk tqtcdysapr is
//
LOCUS       XP_041318315             370 aa            linear   VRT 06-MAY-2021
DEFINITION  pyruvate dehydrogenase E1 component subunit beta, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318315
VERSION     XP_041318315.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462381.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="pyruvate dehydrogenase E1 component subunit
                     beta, mitochondrial"
                     /calculated_mol_wt=39798
     Region          35..367
                     /region_name="PLN02683"
                     /note="pyruvate dehydrogenase E1 component subunit beta"
                     /db_xref="CDD:215368"
     CDS             1..370
                     /gene="PDHB"
                     /coded_by="XM_041462381.1:39..1151"
                     /db_xref="GeneID:121350751"
ORIGIN      
        1 maaalrhlal carlaprgrs agtplqrlqq rrglrlsapa aiqvtvrdal nqaldeeler
       61 dervfllgee vaqydgayki srglwkkygd krvidtpise mgfagiavga amaglrpvce
      121 fmtfnfsmqa idqvinsaak scymsagsis vpivfrgpng asagvaaqhs qcfaawyghc
      181 pglkvvspws sedakgllka sirddnpvvm lesellygvp femseqaqsk efvipigkak
      241 iekpgthvtl vahsrpvghc leaaavlske gvecevinlr tirpmdietv easvvktnhl
      301 vtveggwpqf gvgaeicari megpafnyld apavrvtgad vpmpyakile dnsipqvkdi
      361 vfavkkalni
//
LOCUS       XP_041318328             429 aa            linear   VRT 06-MAY-2021
DEFINITION  protein disulfide isomerase CRELD1 [Pyrgilauda ruficollis].
ACCESSION   XP_041318328
VERSION     XP_041318328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462394.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..429
                     /product="protein disulfide isomerase CRELD1"
                     /calculated_mol_wt=46474
     Region          50..146
                     /region_name="DUF3456"
                     /note="TLR4 regulator and MIR-interacting MSAP; pfam11938"
                     /db_xref="CDD:463404"
     Region          <156..315
                     /region_name="VSP"
                     /note="Giardia variant-specific surface protein;
                     pfam03302"
                     /db_xref="CDD:146106"
     Region          249..276
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          309..342
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     CDS             1..429
                     /gene="CRELD1"
                     /coded_by="XM_041462394.1:1..1290"
                     /db_xref="GeneID:121350758"
ORIGIN      
        1 mgsgrgprgv pprrrgpglg aallgaallg gvllavhadp dphrdgaepc racrgladsf
       61 irglertqhe gfgggntawe eeklskyqhs etrllevleg vcapsdfach qllerseehv
      121 eqwwfheqqq hpdffqwlcv drlmlccpag tygpdcrsca ggpqqpcsgn grcdgdgtrr
      181 gtglcvcspg yggpfcaecg dgyyeasrnk shlvcaecyq acgrctgped ssclrckrgw
      241 vlhehrcidi decgtemahc ranqycvnte gsyecrdcst acigcmgagp arckkcnkgy
      301 wrdgakcldv decasaeepv ctgvqevcen tegsyrcvca qghvrrdgqc vedkppdape
      361 kgffddvtdd evvvlqqmff gvmicalatl aakgdmvfta ifigavaama gywlsdrsdr
      421 vldgfmkgr
//
LOCUS       XP_041318335             297 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial mRNA pseudouridine synthase RPUSD3, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318335
VERSION     XP_041318335.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462401.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..297
                     /product="mitochondrial mRNA pseudouridine synthase
                     RPUSD3"
     Region          43..228
                     /region_name="PseudoU_synth_RluA_like"
                     /note="Pseudouridine synthase, RluA family; cd02869"
                     /db_xref="CDD:211346"
     Site            order(84..87,201)
                     /site_type="active"
                     /db_xref="CDD:211346"
     CDS             1..297
                     /gene="RPUSD3"
                     /coded_by="XM_041462401.1:<1..894"
                     /db_xref="GeneID:121350765"
ORIGIN      
        1 agaagsgsar rgvsggrgwr rllgpketlr llegsvvhre gallalnkpp glpvlgrsgd
       61 lsldallpal rrrlglaael hvvkaparey sglvllsscy httkklqqff tnarvrgqyp
      121 atyraitvgv paevegeist glcwqqqgdr gmvvpvpapg rrslarkdvk stltryrvls
      181 alggcallql qprtafpeql qvhlalllcp algdhrhssr vgrvlgvpff ltletapprt
      241 qvldeellsr lglspqqlhh lplhihlqel vlpegplcap pppyflhtlr clglped
//
LOCUS       XP_041318349             398 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/arginine repetitive matrix protein 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318349
VERSION     XP_041318349.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462415.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="serine/arginine repetitive matrix protein
                     1-like"
                     /calculated_mol_wt=42033
     CDS             1..398
                     /gene="LOC121350769"
                     /coded_by="XM_041462415.1:3239..4435"
                     /db_xref="GeneID:121350769"
ORIGIN      
        1 mrkqkmqvkh rlhrglegpa vrggqpqpgg cpepdndprg psgqcedtga rrrpgcsgas
       61 salaftdkap rplqpqlrpw hrtghrrpep ahrrarhdar tprrtgsara gppgarrgaa
      121 draakaaqsr asdrgprrss rgrppsrppq rslpppatag srlpaptwpa rspgpcaapg
      181 parrhgvsra agesersaaa aaapppaaaa aspragrkrh wvhgdprrrr qgrpghahpt
      241 pcwlsrrrvp prrgarrrrs palppsplat sprgpafaaa slgstrpprr aphgpgapla
      301 rgaatrrgeq gggrrqrrrd aeragcgrar rasratcrga gpagrdrsar gdsrvgtrgr
      361 tkgrcggrpg alggggrrap arrrargacr aarprarv
//
LOCUS       XP_041318361             636 aa            linear   VRT 06-MAY-2021
DEFINITION  urocanate hydratase [Pyrgilauda ruficollis].
ACCESSION   XP_041318361
VERSION     XP_041318361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462427.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..636
                     /product="urocanate hydratase"
                     /calculated_mol_wt=70406
     Region          28..629
                     /region_name="HutU"
                     /note="Urocanate hydratase [Amino acid transport and
                     metabolism]; COG2987"
                     /db_xref="CDD:442226"
     CDS             1..636
                     /gene="UROC1"
                     /coded_by="XM_041462427.1:1..1911"
                     /db_xref="GeneID:121350777"
ORIGIN      
        1 mqlalrnalr yfppeiqkkl alefaeelrl yghiymyrfc pdiemraypi geypcktksa
       61 aaimlmimnn ldpsvaqfpq elvtyggngq vfsnwaqfwl vmqylsemte eqtlvmysgh
      121 plglfpshqr aprlvitngm vipnyssrde yekmfalgvt mygqmtagsy cyigpqgivh
      181 gtvltvlnag rrylraedls gkvfvtsglg gmsgaqakaa viagcvgiia evdeaallkr
      241 hkqgwlmeis nnldhciarl rearknkial slgyhgnvvd lwerlvheld ttgellvdlg
      301 sdqtschnpf nggyypvqlg feegkqllss npgkfrtlvq eslkrhvaai nkladkgmff
      361 wdygnaflle aqragadvak kggnktefry psyvqhimgd ifslgfgpfr wvctsgdprd
      421 lattdsiams vledsirqgv stsvkqqyhd nirwireagr hslvvgsqar ilysdqkgrv
      481 siavainrai segkikapvv lsrdhhdvsg tdspfretsn iydgsafcad mavqnfvgds
      541 frgatwvalh ngggvgwgev inggfglvld gskeaeerak mmlswdvsng varrcwsgna
      601 fayeticqam rengtlrvtl phkvvdenil eqavkh
//
LOCUS       XP_041318374             637 aa            linear   VRT 06-MAY-2021
DEFINITION  podocalyxin-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318374
VERSION     XP_041318374.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462440.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..637
                     /product="podocalyxin-like protein 2"
                     /calculated_mol_wt=68357
     Region          426..637
                     /region_name="CD34_antigen"
                     /note="CD34/Podocalyxin family; pfam06365"
                     /db_xref="CDD:461884"
     CDS             1..637
                     /gene="PODXL2"
                     /coded_by="XM_041462440.1:1..1914"
                     /db_xref="GeneID:121350783"
ORIGIN      
        1 mqplhrapal llllaagtlc lclassedpt adglsstsll efammshlea mnsheqtrpe
       61 aaepdlatgs lhaapgsgfa seeneeskil qppqyfwedg gelndssldl gpatdytfpa
      121 ssqkallkrn gtqvdnwema tvqppaefve pdlhtpfstl eeeegllpid hsrggmeslq
      181 tsgpevasse pvdqedsfsl lfstasaspg vvteaaigep eedsvspgld lgssmgpglp
      241 pvpstfsttv aarspidsee lfevttgdtw avggadsela vattgtelte ttveaggeeh
      301 sareevsept vgwemleptm ltemeqtvei pvgtpspass spgtqtlpgt eqqpssvsll
      361 dradepeldp lwndtesate taaaersssp qagdarmaml ptelpwdsaq vickdwsnla
      421 gknyiilnms dnidceefrl ergpqllalv edafsrqaeg lqdrwlisls kpnendkhll
      481 mtlageqgvi ptkdvlmalg dvkrslaeig iqnystttsc qshpnqtrsd ygklfvvlvi
      541 igsicaiiiv lgliyncwqr rlpkmknmsh geelrfveng chdnptldva sdsqsemqek
      601 kpsvnggnti ngpdswdvli nkqasedvdv feedthl
//
LOCUS       XP_041318387            2798 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-1(VII) chain [Pyrgilauda ruficollis].
ACCESSION   XP_041318387
VERSION     XP_041318387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462453.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2798
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2798
                     /product="collagen alpha-1(VII) chain"
                     /calculated_mol_wt=283878
     Region          36..200
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(43,116,148)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          233..315
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          <280..635
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          425..491
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          570..1093
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          963..1130
                     /region_name="VWA"
                     /note="von Willebrand factor type A domain; pfam00092"
                     /db_xref="CDD:459670"
     Region          <1222..>1518
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <1431..>1670
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <1572..>1799
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1846..1893
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          <1918..>2212
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          2292..2345
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          <2321..>2561
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          2573..2624
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          2724..2776
                     /region_name="Kunitz_collagen_alpha1_VII"
                     /note="Kunitz-type domain from the alpha1 chain of type
                     VII collagen, and similar proteins; cd22627"
                     /db_xref="CDD:438670"
     CDS             1..2798
                     /gene="COL7A1"
                     /coded_by="XM_041462453.1:1..8397"
                     /db_xref="GeneID:121350791"
ORIGIN      
        1 msgqllllav lpallrppaa maqkrsqavc edvleadiaf lvdgsssigr nnfravrtfm
       61 eelvgpfvqv vgekavrfam aqysddprve fsfsqhtdgt svrraiqqls ykggntrtga
      121 glryiadnff gptqrrpgvp qicilitdgk sqddaegpaa klksqgikvf avgiknadrk
      181 elirvasmpt eafffyigdf klldtlvplm trrvcttvgg tlrlldgpsh agpsnleipe
      241 qgldslqvrw raasgpitgy rvqyvpltgl gqpimaerqe vsvgpretnt vlrglrvgte
      301 ylvtvtaqya nsigesvsgr artrhlvgvq hltvhnvsaq smllawqsvr gasgyrlswa
      361 trtgqdrrrv dldagqvsha lvglqpntdy vvtvaplfgq legptatvrq rteagtdqml
      421 qtnilgptsi qvlwtsarda rgyrlewkra tgpepprtvs lpsstntyql tglkpgteyr
      481 itlytlydgg evatpvttfq tgveapvgav sdlrlveesg rwvrlswtgv pgateykvvv
      541 rnnqdgtert rripgsqtgl elgdlregit ylvrvsalag sqegsaatlt vrlkypevgs
      601 isdlrvmeag psqlrvtwrg lpgaggyllt wqgsdglkks rflpadpttf tidglhaniv
      661 ytvgvsaivd gregspvtat grivpeqvgk vtqlevqasr snvarvtwvg vpgatayrvv
      721 wsrrdggsen srrvpghtns fdipnleggv sytvkvtali gnregnpvsv vvttpeavpl
      781 rpvsglqvte asehrlrlaw lpvagstgyr lfwrlaeggp qhsqqlpats ssyalaglep
      841 grhyhisits lagsresepa titaittass hitslrvtev qrdsvtltwt pipgasgyvl
      901 swsppaagge kgrtlpstas sqqvsglrlg qrytftlrpl lgstpgaeas vtertvcrda
      961 lgdvvflvhg trnsssgana vrtllsntvs algrlgpegt qvalatysyr slpwlllnrs
     1021 gdlptvleqi ramryeepsg naigaaisfa rtyllspgag rrpgvpavlv vladspsgdd
     1081 aitvardvka ggvqvlavgl egadreqlrr mvtsedpryi yhgsdlaele geltddlcti
     1141 istrgekgdr geagrhglpg spgppgpqgp pgesaeglgk kgdrgiqgip gprgdpgtrg
     1201 pmgltgpkge kgepgeprvi tdgeqglpgp rgepgvpgsp gspgipgprg plgdpgppgp
     1261 lgpmglpgpp gefvkgekgd rgergppgfv dgavprgdpg ppglpgdpgp rgpagppglk
     1321 gekgdgaegf pgspgrpgdp gdrgprgppg eqgrkgdrga pgelgetgek gdrgvpgpeg
     1381 ekgemgapgh pgpsgregap gptgprgekg ergfpgpegp pgpkgdtgdk gargppglsi
     1441 pgpagpkgeq gdrgivgltg rsgpkgdpge pgekgepgra gtpgqiglrg kegergekgd
     1501 egtpgeaglp gkpgdrgprg lpgyrgppge kgdlgdpgpe grngspgapg skgdrgdpgp
     1561 pgppgravda glggvgakge kgdpgdpged gakgargdag spgvpgergv egprgppgtr
     1621 gdpgdrglpg ekgdrgppgl dgrnglegkp gppgsaglrg dpgkqgdpgr dglpglrgeq
     1681 gppgpvgplg ppgvpgkpge dgkpglngkn gedgtpgedg rkgdkgdagl pgregrsgak
     1741 geqgdrgvpg plgppglpgv pgqvgppgqg spglrgvagp kgdpgepglr gepgrpgnpg
     1801 argdpgttvn ierslealgi kvsslkeltg aydgssdsfp pvverlrgqk gsrgdpgerg
     1861 ppgregslgf pgergpkgdk gdpgtpgpqg pmgravgerg pegppgqpge pgkpgipgvp
     1921 gragelgesg rsgekgdrge kgdrgeqgrd glpgppgppg pkvdvvegsl mglpgergpl
     1981 gpkgakgepg adgergpkgd kgegglrgdr gepgekgrdg spglpgergl agpegkpglp
     2041 gfpgvlgrpg nqgdpgppgp pgsagppgtq gpagakglpg pqgnmglpgp lgppgpggpp
     2101 gvpglpgqvg esgkpgvpgr dgvpgkdgea gmpgkmglpg psgpagpkge pgdagapgqa
     2161 itgppgakge kgepallegv llgepgskgd rglpgpkgek gepgklgepg dpgedvsrrh
     2221 igvvggywgq wmlvgagica patycpglpg glvssqgakg ssgakgekgs lgvgargppg
     2281 qdgppglkgi qgapglkgdk gtpgaglpga rgergdpgpr gedgrpgpeg drgpaglpgn
     2341 rgergdkgdl gapgpkgdkg dtvvvegppg argskgepge rglkgtegdk gdkgeqgmlg
     2401 ekgtrgeqge kgsmgfpgar gpsgqkgevg vpgepgepgq pgrdgipgar gekgdmgplg
     2461 mrglkgergm kgacglngdk gekgepgipg rsglsgrkge pgelglsgpp gipgkeglmg
     2521 pkgdrgfdgq qgakgdqgek gdrgapgvmg gpgprgsdga pgppgpsgsv gprgpegmqg
     2581 qkgergppgq svqgargmpg ipgergeqgs pgphglrgek gepgmteeei rafvrqemsq
     2641 hcacgghfpr hqdsrssstq pflagsahiv pvlklshtee degqdrqiml dnddlvydsm
     2701 dgeeedydev pevdsleqpt vdaepcrlpl deghcqhytl rwyynqrvte crpfvysgcr
     2761 gnpnrfdske ecelrcgqrp apdsrgsags kvggqpkv
//
LOCUS       XP_041318400             345 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich protein 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041318400
VERSION     XP_041318400.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462466.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..345
                     /product="proline-rich protein 2-like"
                     /calculated_mol_wt=35286
     Region          <3..191
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..345
                     /gene="LOC121350798"
                     /coded_by="XM_041462466.1:1..1038"
                     /db_xref="GeneID:121350798"
ORIGIN      
        1 mlpprshtsp kpwgqqfgrf pappvperla alegrplgls avrgyrerla ryspgsapat
       61 pspaprhgig sgapqprlhl aparrgssrp rkvlqgsgkp awaalparpl ppclespacq
      121 ppapclespa rqisapclpa pcpppgeapp prpqrrsapg pvpprwlrrl papaqpgpgg
      181 aspaaqgarv ptgartears cecpppaagp ppqrhahppp prgrsvpqss epiraepcra
      241 qavpartgpr rsrpfmeggp ehgpggaerr gprparppkg lfppaalrgk egkkaapqal
      301 pagappglpr gctacsgsgm gmkpegaghp gtvaagfate tsvrg
//
LOCUS       XP_041318414            3969 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein heavy chain 12, axonemal [Pyrgilauda ruficollis].
ACCESSION   XP_041318414
VERSION     XP_041318414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462480.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3969
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3969
                     /product="dynein heavy chain 12, axonemal"
                     /calculated_mol_wt=454368
     Region          697..1120
                     /region_name="DHC_N2"
                     /note="Dynein heavy chain, N-terminal region 2; pfam08393"
                     /db_xref="CDD:462462"
     Region          917..3596
                     /region_name="DYN1"
                     /note="Dynein, heavy chain [Cytoskeleton]; COG5245"
                     /db_xref="CDD:227570"
     Region          1248..1574
                     /region_name="AAA_6"
                     /note="Hydrolytic ATP binding site of dynein motor region;
                     pfam12774"
                     /db_xref="CDD:463697"
     Region          2256..2516
                     /region_name="AAA_8"
                     /note="P-loop containing dynein motor region D4;
                     pfam12780"
                     /db_xref="CDD:463701"
     Region          2904..3125
                     /region_name="AAA_9"
                     /note="ATP-binding dynein motor region; pfam12781"
                     /db_xref="CDD:463702"
     Region          3665..3965
                     /region_name="Dynein_C"
                     /note="Dynein heavy chain C-terminal domain; pfam18199"
                     /db_xref="CDD:465677"
     CDS             1..3969
                     /gene="DNAH12"
                     /coded_by="XM_041462480.1:89..11998"
                     /db_xref="GeneID:121350805"
ORIGIN      
        1 mehsdeatss krtlrtlfrp pglpppvipe kspsqkklla yhkgkeeqkm inqllidqal
       61 evyysnmder derdaappit elpstvrnif vciffiynnf pflfiqmdne sqlradylfl
      121 kncvlsspmv piqqqwlrsm lamvppslme gkdrqllted llkeivrdye ksmqrcllrr
      181 alvkpdirel dkleeeaplp llplgldfss twhnsyvkak nqiistlril hptmktlldf
      241 gytaffdflv vdfsssrmkg pvdcksfkad aslscskaed kimstwyqrv tglftqseal
      301 dgvkldqlds fyncvavlls nqlkellqrt tevfvklfdp edrrrlpifk mdltfdenrm
      361 efypslqdle eailfvvdci gqtlqnfqtv hawltggtat ldaelpahtv qwakstleks
      421 irdnlegpkq hfkgyvesyg wladgtaeer inrfiaeqps fdeytafide fftlkkeims
      481 lpeviyfpmi clncedlkqg lancasnftk mlmdkiftdy reenericse ceaikesask
      541 vpesteemve imeymkqikt kdfqdlvrrs keccrqmsyl idvypftped lelnstaifw
      601 pkkinlifke hdiliqqska ereqevqqkc dnvhveldkl yksvteleey sqldrmqqyv
      661 tdlrtlqkti qdtdetvaal nkeetllgwk psefpllnnl raeiepyqkl fnlilkwqrt
      721 errwmdgtfl eldgesmeae tdefyremyk llrlfqqklk kaatekkkav rtgrdnptlt
      781 mcssvldqik efkehiptvv vfcnpgmrer hwqqmsdivg yditpdagtt lrkvlkqnls
      841 sylvqfttis vaaskefsle kalhtmketw dsisfttnvy retgihilss vddiqalldd
      901 qimktqtmrg spfikpfene irewesrlik iqeniddwlk vqaqwlylep ifssedimqq
      961 mpeegrqfqt vdrlwreimq fcaedpkvla atslpgltek lqtcnelldk imkglnayle
     1021 kkrlffprff flsndemlei lsetkdplrv qphlkkcfeg iakldflrnl dikgmcsseg
     1081 ervqlvsnis tseargavek wliqvedvml ktvrdviars rmayleterk rwvlewpgqv
     1141 vlcvsqmywt sevhevlhdg pkglkgyydt lqlqlndive lvrgklskqt rttlgalvtl
     1201 dvhardvike migsgvqset dfqwlaqlry ywqnenvrvc iincnvkyay eylgnsprlv
     1261 itpltdrcyr tligafylnl ggapegpagt gktettkdla kalavqcvvf ncsdgldyla
     1321 mgkffkglas sgawacfdef nrielevlsv vaqqilciqr aiqmkletfn fegtelklnp
     1381 ncfiaitmnp gyagrselpd nlkvlfrtva mmvpnyalia eislysygfl nakslsvkiv
     1441 mtyrlcseql ssqyhydygm ravkavlvaa gnlklkfpte dedilllrsi kdvnepkfls
     1501 hdiplfmgit sdlfpgihlp eadyndflec anecctqhnv qpvqtfmqkm iqtyemmivr
     1561 hgfmlvgepf sgktkvlhvl adtlslmkkr gygeeekviy rtvnpksitm gqlfgqfdli
     1621 shewtdgvva ttfrefalse tperkwvifd gpidtlwies mntvlddnkk lclmsgeviq
     1681 mspqmtlife tmdlsqaspa tvsrcgmiyl epsqlgwrpi vtswlnklpe plnseehqdl
     1741 lqglfdwlvp palrvrqrqc kelvptsein vvvaltrife mlicpavqed ptnksirawi
     1801 mgcfafaivw siggicddds rtifdnflre tlsgesetnp vpenlgtwec pleekglvyd
     1861 yvyqlkgkvg wahwnefieq isyrdknvki qdiivptmdt vrytylldlf ithgrplllv
     1921 gptgtgksvy vkdklmnnle keryfpffin fsartsanqt qniimarldk rrkgvfgppm
     1981 gkkciifvdd mnmpalekyg aqppiellrq ffdhgfwydf kdtskitlvd vqllaamgpp
     2041 gggrnpvtpr flrhfnicti nsfsnetmir ifstvvalyl kindfppdfs tignqivtat
     2101 levykkaikn llptpakshy tfnlrdfsrv ihgcllikks svankhvmir lfvhevfrvf
     2161 ydrlvedddr twlfnlvkdi vkdhfketfd rvfahlkdgk ssvteenmrs lcfgdymdpe
     2221 legderlyve ipsieefsdv veqcldeynq tqktrmnlvv frymlehlsr lsrilkqagg
     2281 nallvgmggs grqsltrlaa fmarmcvfqp eisktygtne wredlkrllr sagvkglktv
     2341 flitdtqike esfledidsv lntgevpnlf aadekqeime gvraaaqaad kgeelsplal
     2401 yalfvnfcke nlhivvafsp igdafrnrlr qfpslincct idwfqpwped alervaskfl
     2461 etlqltdter qavvpickyf htsvlalser flqslgrhny vtptsyleli aafqrlltek
     2521 rdsvmkakkk yvngldklaf aesqvgrmki elielqpkle eakvenasmm kiievesaev
     2581 eekrkivkvd eeiatskaee aqalkneces dlaealpvme aaigaldtlk psdiavvktm
     2641 knppsgvklv maavcvireq kperitdpsg sggkildywg vsqkmlgnin flkdlkacse
     2701 kpipeavmqk irteyltnpe fdpqvvakas saaeglckwi kgmevfhrvs keiepkkerl
     2761 kvaeeslavt mellnqkrge laevegrlaa lektfaekte ekarlefqvd lcakklerae
     2821 kligglggek trwnqaacdl qeeydnltgd ilisagviay lgaftagfrq ectkdwsklc
     2881 eekeipcsen fslsknlgdp ikirawniag lptdvfsvdn gvivdnsrrw plmidpqgqa
     2941 nkwiknfekd nrlnvikisd adymrtvenc iqfgtpllle nvgeeldpsl eplllkqtfk
     3001 qggmecirlg dsvieyssdf kffittklrn phympelatk vlllnfmitp egledqllgi
     3061 vvaeerpdle eernalivqs aankkhlqei ekkiletles segdiledet aiqvldsakv
     3121 maneitrkqq iaektelkia esreayrpva qhsavlffsi adlanidpmy qyslswfvsl
     3181 yissihdsnk skvlkkrlqy lndhftynly cqvcrslfet dkllfsfllc cnlllankei
     3241 ehqefmfllt ggvglknehk npdpswlsdk swdelcrase fpalerlrsh vsenisewqk
     3301 lydskephnf plpeefnntl telqkmivlr clrpdkigpa ittfvteklg kkfvepppfd
     3361 laksyldsta tvplifvlsp gadpmsslmk landremvgd kfqsislgqg qgpiatkmiq
     3421 tgmeegtwvc lqnchlavsw mpmlekicee ldsetchpef rlwltsypsp kfpvtilqng
     3481 vkmtnepptg lrlnllqsfl sdpisdpeff agcpgkeliw ekllfgvcff halvqerrkf
     3541 gplgwnipyg fnesdlrisi rqlqlfiney shvpfeavsy ltgecnyggr vtddwdrrll
     3601 ltmlddfynp diienprytf spsgnyyapp kgtyedyief iknlpftqhp evfglhenvd
     3661 iakdlqqtkt lfesliltqg ggsqgtsggg dstlyaiadd ilsklpkdfd iescltkypv
     3721 ryeesmntvl vqemerfnhl irtiritlin lkkaikglvv mdadlealsg slligkvpek
     3781 waqhsypslk plgsyivdll arlkflqdwy elgkpavfwl sgfyftqafl tgamqnyark
     3841 hripidllgy efevipqdta dtapedgvyi hglfldgarw drtkgmlteq ypkvlfdamp
     3901 iiwikpnvks dikksnayvc plyktserkg vlsttghstn fvialrlntd qpvqhwikrg
     3961 vallcqldd
//
LOCUS       XP_041318429             996 aa            linear   VRT 06-MAY-2021
DEFINITION  ERC protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318429
VERSION     XP_041318429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462495.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..996
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..996
                     /product="ERC protein 2"
                     /calculated_mol_wt=115167
     Region          150..941
                     /region_name="Cast"
                     /note="RIM-binding protein of the cytomatrix active zone;
                     pfam10174"
                     /db_xref="CDD:431111"
     CDS             1..996
                     /gene="ERC2"
                     /coded_by="XM_041462495.1:1..2991"
                     /db_xref="GeneID:121350808"
ORIGIN      
        1 mygsartisn legspsrspr lprsprlghr rtssgggggt gktlsmeniq slnaayatsg
       61 pmylsdhegv asttfpkgtm tlgratnrav yggrvtamgs spniasagls htdvlsytdq
      121 hgglttsshh hhhqvpsmlr qvrdstmldl qaqlkdlqre ndllrkeldi kdsklgssmn
      181 siktfwspel kkervlrkee aarmsvlkeq mrvsheenqf ldarrtkhlq mtiqalqdel
      241 rtqrdlnhll qqesgnrgae hftielteen frrlqaehdr qakelfllrk tleemelrie
      301 tqkqtlnard esikklleml qskglpskgm eddnertrrm aeaesqvnhl evildqkeke
      361 nmhlreelhr rtqlqpepak tkalqtviem kdtkiasler nirdledeiq mlktngvlnt
      421 edreeeikqi evykshskfm knkidqlkqe lskkesella lqtkletlsn qnsdckqhie
      481 vlkesltake qraailqtev dalrlrleek etflnkktkq lqdlteekgt lageirdmkd
      541 mlevkerkin vlqkkienlq eqlrdkdkql tnlkdrvksl qtdssntdta latleealse
      601 keriierlke qrdrddrerl eeiesykken kdlkekvnal qaeltekess lidlkehass
      661 lasaglkrds klksleiaie qkkeecskle aqlkkqaeql fnqmynpmpi rnngkqgahe
      721 aeeearmnpe fadrmkqldk easyyreecg kaqaevdrll eilkevenek ndkdkkiael
      781 esltsrhmkd qnkkvanlkh nqqlekkkna qlleevrrre dnmtdnsqhl qveelmnale
      841 ktrqeldstk arlastqqsl aekeahlanl rierrkqlee ilemkqeall aaisekdani
      901 allelsaskk kktqdevmal krekdrlvhq lkqqtqnrmk lmadnydddh hhyhhhhhhh
      961 hhrspgrtqh nhrpspdqke ekgikdllsw fgsvsd
//
LOCUS       XP_041318442             381 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 40 [Pyrgilauda ruficollis].
ACCESSION   XP_041318442
VERSION     XP_041318442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462508.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="transmembrane protein 40"
                     /calculated_mol_wt=42764
     Region          <92..132
                     /region_name="RMtype1_S_TRD-CR_like"
                     /note="Type I restriction-modification system specificity
                     (S) subunit Target Recognition Domain-ConseRved domain
                     (TRD-CR) and similar domains; cl38903"
                     /db_xref="CDD:365779"
     Region          257..380
                     /region_name="TMEM40"
                     /note="Transmembrane protein 40 family; pfam15817"
                     /db_xref="CDD:464892"
     CDS             1..381
                     /gene="TMEM40"
                     /coded_by="XM_041462508.1:1..1146"
                     /db_xref="GeneID:121350813"
ORIGIN      
        1 mgahaysvts gatgqrsrcr sppkfdnrka srrvaellpq peetgagrvs drtgvdqfll
       61 shrkklsfhh ghgppgrppv epaartnlrl agtamenldv pipdlteeqr dilqrvfaad
      121 akylenhekm nqsfweslvk clastdppil nteeknnlln scdvlpggca aclkaiekkg
      181 vramallyll lktsnpsgyr qlpsskgkde klkllksler nfeyseedkk senssqesmd
      241 eytqdsdeed lgrqktegql lggipaemvp yrdseiarre dsdvdayeke sthppqctwm
      301 girkddeffh fvilcfaiga llvcyyyykd wtislgigli tfaslettgi yfglvyrirs
      361 vldsfvplid rfrprgmrka a
//
LOCUS       XP_041318453            1384 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group D2 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041318453
VERSION     XP_041318453.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462519.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1384
                     /product="Fanconi anemia group D2 protein"
                     /calculated_mol_wt=154709
     Region          42..1351
                     /region_name="FancD2"
                     /note="Fanconi anaemia protein FancD2 nuclease; pfam14631"
                     /db_xref="CDD:464225"
     CDS             1..1384
                     /gene="FANCD2"
                     /coded_by="XM_041462519.1:5..4159"
                     /db_xref="GeneID:121350823"
ORIGIN      
        1 mvskrklskv daseescktd lpktkksrss dkenasafcg lenegvfeel lrtsgivlka
       61 gegqneiavd qiafqkklcl alekhptypa vvkqfisgle shikdrnqfk ncllpctpvr
      121 tegsrnlvhs ycesliklll gikilqpavi tlllekipef ffdivgtfgt nfprliinqf
      181 kwldrlldsq dlvrklmqmv svspvpiqhd iitslpeile dsqqsevare lscllkqgrr
      241 ltvpildals rldldaelva evrqsamtiv psvkledlpv vvkfilqnvk aadavevisd
      301 lrksldlssc vlplqihnsq kkiksqvqts sslsqvttsq ncvkllfdvi klavrfqkdv
      361 seawikaien ctsvsdhkvl dlivlllihs tntrnrkqte kvlrskirlg cmpeqlmqna
      421 fqnhstvikd ffpsilalaq tflhsahpav vsfgscmykq afaafdsycq qevvtalvth
      481 vcsgseteld isldvltdlv vlhtsllmry atfvktilds tqklnpcqir klfyilstla
      541 fsqkqegsyi qddmhmvirk wlsstvpnhk qmgiigavsm igsvalkrne gdaaslerpe
      601 lnserdeqls tlldlvrfcc eqtpevlaly ydefasliek qkgnldlqll defgicchki
      661 lavsplclsp cfrllrlyta eqnsgsledi dallgcplyl tdlevegkld slskqerefl
      721 csllfyalnw frevvnafcq qqdaemkgkv ltrlqnitel qnvlgkclaa tpgyvpppat
      781 fdsealeaap sinaagpark rsgrkkkadg skagsadrsq aedssegnqp dtelseldkt
      841 gadreaespl aqlqsyrpyf reldlevftv lhcglltksv ldtemhtear evvqlgpael
      901 cfllddlcwk lehvlpsgst rrvpfpkerg nkdigfshlc qrspkevamc vvdllkplck
      961 hmenmhnyfq aavqaqgaed epgvniqehq lmsscyqlll ltfrclfawn gfsqhentdl
     1021 lrsalqvlad rlkpgetefl lleelisesf qyllnfqqsv psfhcayilt qlliaiaekp
     1081 vagwkkekma slakqflcqs wvkpsgdrek gsqfnsalht llcvylehtd nilkaieeis
     1141 svgvpelmns akdgcsstyp tlsrqtfpvf frvmmaqles svksipagkp sdssevqlek
     1201 llrwniavrn fhilinlvkv fdsrpvlsic lkygrlfvea flklamplld hsfkkhtddv
     1261 qsllktlqms trqlhhmcgh skihqdiglt nhvpllkksl eqfvyrvkam lafnhcqeaf
     1321 wvgilknrdl qgeeiltqas eergsdedee dsaegpaeee psssdtdgse erggagpgpg
     1381 aarp
//
LOCUS       XP_041318466             554 aa            linear   VRT 06-MAY-2021
DEFINITION  U3 small nucleolar RNA-interacting protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318466
VERSION     XP_041318466.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462532.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="U3 small nucleolar RNA-interacting protein 2"
                     /calculated_mol_wt=60562
     Region          212..512
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(218,236,240,246..247,270..271,289,293,299..300,
                     312..313,330,335,341..342,355,372,377,383..384,395..396,
                     413,417,423..424,437..438,465,470,476..477,493..494,511)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          222..270
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..312
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          317..353
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          360..393
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          400..437
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          452..490
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..554
                     /gene="RRP9"
                     /coded_by="XM_041462532.1:1..1665"
                     /db_xref="GeneID:121350828"
ORIGIN      
        1 mggrggsagg pgalttgpgq rvpgtsgrsr pkgprhrdrr gvasgrgvtk rwrrdygagr
       61 arrrarkgcl agvsavrlcc arphsrpvps rrsphfvpqa pgadgrprat agrpadeevs
      121 sdsetespll grrrreaaee eveetpqekk lrlakqylee lrqleeerae eeeelepadl
      181 igdrlkedvl eqrgrlqrlv akdvqppdpa rirvlrghql pvtclvispd drfifsaskd
      241 gslikwevds gkrlcvvpgg kkgteerhmg hasqvlcmai ssdgkylatg drnklimiwd
      301 aatckrlhif tghrdavsgl sfrkgthqly sashdrcvkv wdvaenayve tlfghqdiit
      361 gldslsrecc vtaggrdgtv rlwkipeesq lvfsghqgsi dciqlineeh mvsgaddgsl
      421 alwgltkkkp lalarqahge qeaqglqqpl wisavaalrn tdllatgshs gsvklwkcge
      481 gfrklehlld iplvgfvnsl kfsaagdflv agigqehrlg rwwrikeakn siciiplkqk
      541 ttasspeegs pgss
//
LOCUS       XP_041318480            4404 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein heavy chain 1, axonemal [Pyrgilauda ruficollis].
ACCESSION   XP_041318480
VERSION     XP_041318480.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462546.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4404
                     /product="dynein heavy chain 1, axonemal"
                     /calculated_mol_wt=497864
     Region          2..>144
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1153..1556
                     /region_name="DHC_N2"
                     /note="Dynein heavy chain, N-terminal region 2; pfam08393"
                     /db_xref="CDD:462462"
     Region          <1392..4037
                     /region_name="DYN1"
                     /note="Dynein, heavy chain [Cytoskeleton]; COG5245"
                     /db_xref="CDD:227570"
     Region          1683..2009
                     /region_name="AAA_6"
                     /note="Hydrolytic ATP binding site of dynein motor region;
                     pfam12774"
                     /db_xref="CDD:463697"
     Region          2695..2956
                     /region_name="AAA_8"
                     /note="P-loop containing dynein motor region D4;
                     pfam12780"
                     /db_xref="CDD:463701"
     Region          4098..4400
                     /region_name="Dynein_C"
                     /note="Dynein heavy chain C-terminal domain; pfam18199"
                     /db_xref="CDD:465677"
     CDS             1..4404
                     /gene="DNAH1"
                     /coded_by="XM_041462546.1:1..13215"
                     /db_xref="GeneID:121350837"
ORIGIN      
        1 mgghserprg ppevslpgst crqaagarpt ptpapsiprp rspcapekph hperspgppi
       61 lhpgafpprp arqpppsrrd ptpapaqrpr pavaagappr rapplpspar yrpgstrrrs
      121 pplqpnrgwr tcpaarsrpa psspwtgraa gaaagvgptc aappspsaaa adsrcrgggq
      181 reggasapsp ppalpgtgpq sgrgsppppq pplpsppppg ipsgpptaea alstggaqpg
      241 mgtqpamevt aqgasagpqv skslvnqaeq eqhtpkvtkl nmpgnlkslt ekqmvgpste
      301 ilaesdfpeq sfkpkvqmsf krvpgqnprk veverrrrly ltfdiaella skgidsnqlm
      361 prhydpdnmp pieenkdtvf piylplkvfd ndefdcrtpe ewmslglepg ssdrkpvpgk
      421 allptddvlg hedpksqkli ykwidvgvld ydketdlylv hktdekglvr deegkpilng
      481 gitpegrapl lpcqywvprv clqflaedpq vfaervacad slrkktqgll myhlyvdcmp
      541 tegldtisek slqrmkrlai qtpklkdeks mldqisslek evkldykhtm nmisfdrvvt
      601 skpemfsfvt lpdkeekeap ekgivsvpdy pfhkrqrefn flslltrpea ihlleqvqde
      661 cnkaavlslf stnitklvsl eefeeiqtqa ftqvqeflkd twintiktai kssledagkw
      721 fnleesdwda yqgsklrklm erirfmlqds lrylvqnsli sftkfvldvc qsvldcskdm
      781 ewghditnsp yvsqrnplfv tdieldssgv lfrpsvesie tslislfdng ilathsipql
      841 eqyvlenmdi tgtpmlesvg lqepkveelr ealrsairka giplhaygrr yekfleinnn
      901 dikyflkdye eqfpptpevt kivdtylsek etldhllpss iiigpfqvri ehirlnlsdk
      961 hkalatamld mlaktlhsqv qkiceayeai stkmherpdn ieelvelrdw lkgvpeqlav
     1021 qeqlieevme dykvmedfly nlteedftdk wtasywpvkm smdsesvrlq hiddeerfrk
     1081 tqisdqkafq ekleemqltv ggfsvqsdvn qahelaedar dvrkqlkelq dmavlynnre
     1141 rlfgikvtdy sgvnkmlkdf qpyydlwttv sdwikwnesw mndsllkiea eeleknvnds
     1201 vksmqrcvkl fkdspdcqsv amdfrdkmtd fkqyvpliqg lrnpgmrsrh wemlsdqvka
     1261 evtlepsmtf grclelnlqd hmetvlkvae taskeyaien alnkieaewk svsfivmlyk
     1321 ntktyilkst ddisqllddh ivlvqsmsfs pfkkpfeerm nlwetklkmt qdvleewlnc
     1381 qrswlylepi fssedikrql plesqryntv dkdwrvvmnk ananpevisl cpdpellkml
     1441 qkcnellelv qkglseylet kraafprfyf lsddelleil sqtkdptavq phlhkcfeni
     1501 arlkfqedlq ithmysgege evklfsaitp senvedwlve veksmrasvr dnieksigvy
     1561 petprtkwvl ewpgqvviag cqifwtkevs ealeagdlss rlypqlsaql gdlvalvrgr
     1621 lskmqravls alivievhak dvaaklveen irsmndfewi sqlryywtre dlyiravnae
     1681 fiygyeylgn tgrlvitplt drcyltltga lhlkfggapa gpagtgktet tkdlgkalai
     1741 qtvvfncsdq ldfmamgkff kglassgawa cfdefnridi evlsvvaqqi ttiqkaqqqr
     1801 vetfifegte iplvpscavf itmnpgyagr telpdnlkal frpvammvpd ysmiaeisly
     1861 sfgfneakvl akkitttfkl lseqlssqdh ydfgmravkt vistagnlkr enpdmdeeli
     1921 clrairdanv pkflqddlkl fngivsdlfp niketpvdyg ileeairksc ieanlkdvdg
     1981 fvtkciqlye ttvvrhglml vgptgsgktk syevlaaamt slkgqpaasg gnyeavryfv
     2041 lnpksitmgq lygefnllth ewtdgifstl mrrgtvaads nkkwymfdgp vdalwienmn
     2101 tvlddnkklc lssgeiikmt egmtmmfevq dlavaspatv srcgmvylep silgldpfie
     2161 cwlknmpevm qrfaqqlasl fkrflqeaid flrssvkeii astdsnltms lltllecqyq
     2221 pfipvkglkt iprektarmg eliepwfifa liwsvgatgd slgreafssw lrkkmakeri
     2281 rllfpeeglv ydyklddggl sgteedldee vrkevhwevw ldatakftmv pdtnfcdiiv
     2341 ptmntvrmay llqlllinyk pvlcigptgt gktltiadkl lknlpnkyia hflmfsarts
     2401 snqtqdlids kldkrrkgvf gppvgryfif fiddlnmpml eqygaqppie llrqwmdhhg
     2461 wydrkqigtf kklvdinfvc amgppgggrn pvtprltrhf nylsfteldd sskrkifsti
     2521 lgswmggflg eksyrnpvpg adavkdlnep lvnatisvym titsqllptp akshytfnlr
     2581 dlskvfqgml maeaakvesk ehllrlwyhe scrvfrdrlv sdedrtwfdn lmtekmeefg
     2641 ttfeeviptq tvlfgdfmep rasvkvyqai dsqdklklvi eeyleeynqs ktpelklvlf
     2701 mdaiqhicri srilrqapgn alllgvggsg rqsltrlash maeyecfqie lsknygmtew
     2761 redvrkimmm aglqnlpktf lfvdtqiqse sfledinnll nsgdipniys peeqdqimta
     2821 mkpilrdlgq qptkanlmaa yvarvrsnih mvlcmspige vfrarlrqfp slvncctidw
     2881 fnewpaealq svassflnel pllgsgnedi sgmiqvcvai hlsvakkcql flaelgrhny
     2941 itpksylefl sifssligkk qqelktaknr mqsgldkllr taedvakmqe elessrplla
     3001 qaakdteati eqikvdtava eetrsavqae eakanekaqt aqaiaddaqk dlaealpald
     3061 aalaslknln rndvtevral qrpppgvkiv ieavcimhgk kpkkvageki gtkvddywep
     3121 grallqdpvq flnslydydk dnipdsvika iqpyidndef qpaaiakvsk actsicqwvr
     3181 amhkyhfvak vvepkrqalr eaeedlratq mildeakqrl kevedgiaml qakyeackan
     3241 keelerkceq clerlaradv linsladekv rwqdtvesld dkinnssgdv lvaagfvayl
     3301 gpftgdyraa lttewmeela kndiphseda slintlgdpv eirswqvagl pndalsveng
     3361 vitrfslrwn hyidpqgqan kwiknleren slevaklsdr dflstlenti sfgkpfllen
     3421 vgeeldpvle pvllketfkq qgstvlklgd tvipyhddfk myittklpnp hyspevstkl
     3481 tlinftlsps gledqllgev vaaerpdlee drnqlivsna qmrqelkvie dqilyrlsts
     3541 egnpvddlel ikvleasklk ageiqakvav aeqtekdini trmqyvpvav rsqilyfcvs
     3601 dlsnvdpmyq yslewflnif llgirnseka eevtqrveni nnyitfslyc nvcrslfekh
     3661 klmfaflvsv rilmnegkid mdewryllsg gaikemkdnp apawlneraw gdilalssle
     3721 nfsgfdndfa dslegfrtif dsqsphrqpl pgkwedelda fqkllvlrcl rgdkvtnamq
     3781 dfvvrnldqr fiepqttdls vvfkestatt plvfvlspgt dpaadlykfa eemkftqkls
     3841 aislgqgqgp raeamlntam eqgnwvffqn chlapswmps lerlieaidp skvhpdfrlw
     3901 ltslpsnhfp vsilqngskm tiepprgvka nllksyisfn ddflnscskv tefkslllsl
     3961 cffhgnmler rkfgplgfni pyeftdgdlr icisqlqmfl neyaeipykv lkytageiny
     4021 ggrvtddwdr rcimsiledf ykpevlspdf aysesgiykq istssdlngy lqyvkglpln
     4081 dspelfglhd naditfaqne tfallgalsq lqpktitlgg rsreeiveet skdilaklpd
     4141 pmnlqeviqk ypllyeesmn tvlvqeviry nklleevals lkdllkalkg lvvmssrlel
     4201 masslynntv peiwnakayp slkplaswvn dlvqrveflq nwisngipsv fwisgfffpq
     4261 afltgtlqnf arksvisidt isfsfqvmke svkeltsqpk vgcyihglfl egarwdaaag
     4321 kleesrpkel ytdmaviwlv pvanrkppes gsylcpiykt ltragtlstt ghstnyviav
     4381 eiptdkpekh wikrgtalic aldf
//
LOCUS       XP_041318493             874 aa            linear   VRT 06-MAY-2021
DEFINITION  coatomer subunit gamma-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041318493
VERSION     XP_041318493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462559.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..874
                     /product="coatomer subunit gamma-1"
                     /calculated_mol_wt=97529
     Region          14..869
                     /region_name="SEC21"
                     /note="Vesicle coat complex COPI, gamma subunit
                     [Intracellular trafficking and secretion]; COG5240"
                     /db_xref="CDD:227565"
     Region          288..313
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          323..354
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          363..397
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          398..423
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          435..461
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          471..501
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..874
                     /gene="COPG1"
                     /coded_by="XM_041462559.1:191..2815"
                     /db_xref="GeneID:121350841"
ORIGIN      
        1 mlkkfdkkde esggnsnpfq hleksavlqe arvfnetpin prkcahiltk ilylinqgeh
       61 lgvmeatdsf famtklfqsn dptlrrmcyl tikemssiae dviivtsslt kdmtgkddny
      121 rgpavralcq itdstmlqai erymkqaivd kvpsvsssal vsslhllkts ydvvkrwvne
      181 aqeaassdni mvqyhalgll yhvrkndrla vnkmlskftr hglkspfayc lmiriaskll
      241 eeeagsrdsp lfdfiesclr nkhemvvyea asaivnlpnc takelapavs vlqlfcsspk
      301 aalryaavrt lnkvamkhps avtacnldle nlvtdsnrsi atlaittllk tgsessidrl
      361 mkqissfmse isdefkvvvv qainalcqky prkhavlmnf lftmlreegg feykraivdc
      421 iisiieense sketglshlc efiedceftv latrilhllg qegpktnnps kyirfiynrv
      481 vleheevrag avsalakfga qneemlpsil vllrrcvmdd dnevrdratf ylnvleqkqk
      541 alnagyilng ltvsipgler alhqytleps ekpfdlksvp latapvieqr aenapvavvk
      601 qpekvaatrq eifqeqlgai pefrglgplf ksspepvalt eleteyvvrc tkhtfvnhvv
      661 fqfdctntln dqilenvtvq meptegyevi gyvpaktlvy nqpgtcytlv alseedptav
      721 actfscmmkf tvkdcdpntg eaddegyede yvledlevtv adhiqrvlkp nfgaawdevg
      781 defekeetft lsaiktleea vsnivkflgm qpcersdkvp dnknshtlyl agvfrgghdl
      841 lvrsrlvltd tvtmqvtars aeelpvdvim asvg
//
LOCUS       XP_041318507             335 aa            linear   VRT 06-MAY-2021
DEFINITION  abasic site processing protein HMCES [Pyrgilauda ruficollis].
ACCESSION   XP_041318507
VERSION     XP_041318507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..335
                     /product="abasic site processing protein HMCES"
                     /calculated_mol_wt=38102
     Region          1..250
                     /region_name="SRAP"
                     /note="SOS response associated peptidase (SRAP);
                     pfam02586"
                     /db_xref="CDD:460605"
     CDS             1..335
                     /gene="HMCES"
                     /coded_by="XM_041462573.1:41..1048"
                     /db_xref="GeneID:121350847"
ORIGIN      
        1 mcgrtacsla adnlrracay rdrrgrqrqp ewvrqeryqp synkgpqssg pvllsrrhlq
       61 qdadsservl mdmrwglvps wfkqdnpskl qfntsncrsd tmlskssykg allkgkrcvv
      121 ladgfyewqq qsggkqpyfi yfpqtkdamd kemegdeewk gwrlltmagi fdcweppggg
      181 emlytytiit vdaskdvsfi hhrmpaildg deairkwldf aevptqeavk liqptenivf
      241 hpvstfvnni rnntpecvap ielgakkevk atpsnklmlg wlkssqegsp qkkendlpkw
      301 tsqfihspsp kktstdilqq wlgkqgqpaa kkhka
//
LOCUS       XP_041318517             911 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: rabenosyn-5 [Pyrgilauda ruficollis].
ACCESSION   XP_041318517
VERSION     XP_041318517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462583.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..911
                     /product="LOW QUALITY PROTEIN: rabenosyn-5"
                     /calculated_mol_wt=101928
     Region          <19..146
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          310..421
                     /region_name="FYVE_RBNS5"
                     /note="FYVE domain found in FYVE finger-containing Rab5
                     effector protein rabenosyn-5 (Rbsn-5) and similar
                     proteins; cd15716"
                     /db_xref="CDD:277256"
     Site            order(313,316,334..339,341..342,409..411)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277256"
     Region          611..649
                     /region_name="Rbsn"
                     /note="Rabenosyn Rab binding domain; pfam11464"
                     /db_xref="CDD:463283"
     Region          696..856
                     /region_name="NPF"
                     /note="Rabosyn-5 repeating NPF sequence-motif; pfam16601"
                     /db_xref="CDD:406900"
     Region          867..905
                     /region_name="Rbsn"
                     /note="Rabenosyn Rab binding domain; pfam11464"
                     /db_xref="CDD:463283"
     CDS             1..911
                     /gene="RBSN"
                     /coded_by="XM_041462583.1:79..2814"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121350852"
ORIGIN      
        1 mgtapghrgg ngrrrdacpl rdsavpssrg lfrrssagpl rrpaarrpdt asgpglsrds
       61 gptaapappa idssalgspp aasdepslpr pflssmaqrs prpqprsplp aagtgrsrpa
      121 letvtgrpga eavpqddaap asrqpvraar aaamasgcpa afgdptevre gflcplclkd
      181 lqafrqlqah yeeqhsgedr dvraqlrnlv qkakrakkkl lkqedddrtd sgsqeryesf
      241 syggvdpymw epqevgamrs hlsefkkhra aridhyvvev nkliirlekl tsfdrantes
      301 akiraieksv vpwvsdqdvp fcpdcgskfs irnrrhhcrl cgsimckkcm efvslplask
      361 ltsaskealg shtspnssps svhgsrrgsi ssissvssvl dekdderirc cqhckdtllk
      421 reqqidekey tpeivklyek lrlcmekvdq kapeyirmae slnagesays ldhandlrve
      481 iqkmyefida lskkilslgl hedpqphpki lqlqrmirys atlfvqekll glmslptkdq
      541 yeelkkrrlh mvtletqgkq eekqkefisi sasavngdet hikkgtvkks egwlptssis
      601 reseradpll qqidnitsfi kqakaanrid evhtlqenlm qlqdeydqqq tlkaielskk
      661 qaeeeeiqre elqvlrekew erehhkftsq hsrtrsldfr evkqhldvtw ikgdtsfetp
      721 aveqlpakeh stftlkpqnv pqcdkdcnqp aclnpfedea dtpqvedpan pfakdtspvv
      781 sfsntaqqsd kkeynpfese eedeqsngap gstsnpfeed entyekpggs wnsgnpfeeg
      841 ssinpfeved gseisgeeai eeelllqqid nikayifdak hsgrldevev ltenlkelkh
      901 tlakqkeksn c
//
LOCUS       XP_041318530             629 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318530
VERSION     XP_041318530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X1"
                     /calculated_mol_wt=69011
     Region          145..231
                     /region_name="NR_DBD_TR2_like"
                     /note="DNA-binding domain of the TR2 and TR4 (human
                     testicular receptor 2 and 4) is composed of two C4-type
                     zinc fingers; cd06967"
                     /db_xref="CDD:143525"
     Site            order(150,153,167,170,186,192,202,205)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143525"
     Site            order(160..162,168..169,171,173,176,179,199..200,203,206,
                     217,220)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143525"
     Region          394..615
                     /region_name="NR_LBD_TR2_like"
                     /note="The ligand binding domain of the orphan nuclear
                     receptors TR4 and TR2; cd06952"
                     /db_xref="CDD:132750"
     Site            order(418..419,423,457,461,464,478,505)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132750"
     Site            order(428,431,435,440,445..446,448..449,452..453)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132750"
     CDS             1..629
                     /gene="NR2C2"
                     /coded_by="XM_041462596.1:549..2438"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 matnmevlaq qvvetqqvae vptvqtslse spvmtspsqr iqiistdssv aspqriqivt
       61 dqqtgqkiqi vtavdsavsp kqqfilaspd gtgagkvila apetsnakql iftttdnivp
      121 griqivtdsa sverllgktd vqrpqvveyc vvcgdkasgr hygavscegc kgffkrsvrk
      181 nltyscrsnq dciinkhhrn rcqfcrlkkc lemgmkmesv qserkpfdvq rekptncaas
      241 tekiyirkdl rspliatptf vadkdgtrsa glldpgmlvn iqqplirddg tvlltadska
      301 etsqgalgtl anvvtslanl seslnngdts eiqqeeqsas eitrafdtla kalntadgtt
      361 ahnladgmdp tgggnihvis rdqstpiiev egplltdthv tfkltmpspm peylnvhyic
      421 esasrllfls mhwarsipaf qalgqdcnts lvracwnelf tlglaqcaqv mnlstilgai
      481 vnhlqnsiqe dklsgdrikq vmehiwklqe fcnsmakldi dgyeyaylka ivlfspdhpg
      541 ltsstqiekf qekaqmelqd yvqktypedt yrlarilvrl palrlmsssi teelfftgli
      601 gnvpidsiip yilkmetaey ngqitgmsa
//
LOCUS       XP_041318539             629 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318539
VERSION     XP_041318539.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462605.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X1"
                     /calculated_mol_wt=69011
     Region          145..231
                     /region_name="NR_DBD_TR2_like"
                     /note="DNA-binding domain of the TR2 and TR4 (human
                     testicular receptor 2 and 4) is composed of two C4-type
                     zinc fingers; cd06967"
                     /db_xref="CDD:143525"
     Site            order(150,153,167,170,186,192,202,205)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143525"
     Site            order(160..162,168..169,171,173,176,179,199..200,203,206,
                     217,220)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143525"
     Region          394..615
                     /region_name="NR_LBD_TR2_like"
                     /note="The ligand binding domain of the orphan nuclear
                     receptors TR4 and TR2; cd06952"
                     /db_xref="CDD:132750"
     Site            order(418..419,423,457,461,464,478,505)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132750"
     Site            order(428,431,435,440,445..446,448..449,452..453)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132750"
     CDS             1..629
                     /gene="NR2C2"
                     /coded_by="XM_041462605.1:348..2237"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 matnmevlaq qvvetqqvae vptvqtslse spvmtspsqr iqiistdssv aspqriqivt
       61 dqqtgqkiqi vtavdsavsp kqqfilaspd gtgagkvila apetsnakql iftttdnivp
      121 griqivtdsa sverllgktd vqrpqvveyc vvcgdkasgr hygavscegc kgffkrsvrk
      181 nltyscrsnq dciinkhhrn rcqfcrlkkc lemgmkmesv qserkpfdvq rekptncaas
      241 tekiyirkdl rspliatptf vadkdgtrsa glldpgmlvn iqqplirddg tvlltadska
      301 etsqgalgtl anvvtslanl seslnngdts eiqqeeqsas eitrafdtla kalntadgtt
      361 ahnladgmdp tgggnihvis rdqstpiiev egplltdthv tfkltmpspm peylnvhyic
      421 esasrllfls mhwarsipaf qalgqdcnts lvracwnelf tlglaqcaqv mnlstilgai
      481 vnhlqnsiqe dklsgdrikq vmehiwklqe fcnsmakldi dgyeyaylka ivlfspdhpg
      541 ltsstqiekf qekaqmelqd yvqktypedt yrlarilvrl palrlmsssi teelfftgli
      601 gnvpidsiip yilkmetaey ngqitgmsa
//
LOCUS       XP_041318548             596 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318548
VERSION     XP_041318548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X2"
                     /calculated_mol_wt=65484
     Region          112..198
                     /region_name="NR_DBD_TR2_like"
                     /note="DNA-binding domain of the TR2 and TR4 (human
                     testicular receptor 2 and 4) is composed of two C4-type
                     zinc fingers; cd06967"
                     /db_xref="CDD:143525"
     Site            order(117,120,134,137,153,159,169,172)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143525"
     Site            order(127..129,135..136,138,140,143,146,166..167,170,173,
                     184,187)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143525"
     Region          361..582
                     /region_name="NR_LBD_TR2_like"
                     /note="The ligand binding domain of the orphan nuclear
                     receptors TR4 and TR2; cd06952"
                     /db_xref="CDD:132750"
     Site            order(385..386,390,424,428,431,445,472)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132750"
     Site            order(395,398,402,407,412..413,415..416,419..420)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132750"
     CDS             1..596
                     /gene="NR2C2"
                     /coded_by="XM_041462614.1:564..2354"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 mtspsqriqi istdssvasp qriqivtdqq tgqkiqivta vdsavspkqq filaspdgtg
       61 agkvilaape tsnakqlift ttdnivpgri qivtdsasve rllgktdvqr pqvveycvvc
      121 gdkasgrhyg avscegckgf fkrsvrknlt yscrsnqdci inkhhrnrcq fcrlkkclem
      181 gmkmesvqse rkpfdvqrek ptncaastek iyirkdlrsp liatptfvad kdgtrsagll
      241 dpgmlvniqq plirddgtvl ltadskaets qgalgtlanv vtslanlses lnngdtseiq
      301 qeeqsaseit rafdtlakal ntadgttahn ladgmdptgg gnihvisrdq stpiievegp
      361 lltdthvtfk ltmpspmpey lnvhyicesa srllflsmhw arsipafqal gqdcntslvr
      421 acwnelftlg laqcaqvmnl stilgaivnh lqnsiqedkl sgdrikqvme hiwklqefcn
      481 smakldidgy eyaylkaivl fspdhpglts stqiekfqek aqmelqdyvq ktypedtyrl
      541 arilvrlpal rlmsssitee lfftglignv pidsiipyil kmetaeyngq itgmsa
//
LOCUS       XP_041318557             596 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318557
VERSION     XP_041318557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X2"
                     /calculated_mol_wt=65484
     Region          112..198
                     /region_name="NR_DBD_TR2_like"
                     /note="DNA-binding domain of the TR2 and TR4 (human
                     testicular receptor 2 and 4) is composed of two C4-type
                     zinc fingers; cd06967"
                     /db_xref="CDD:143525"
     Site            order(117,120,134,137,153,159,169,172)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143525"
     Site            order(127..129,135..136,138,140,143,146,166..167,170,173,
                     184,187)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143525"
     Region          361..582
                     /region_name="NR_LBD_TR2_like"
                     /note="The ligand binding domain of the orphan nuclear
                     receptors TR4 and TR2; cd06952"
                     /db_xref="CDD:132750"
     Site            order(385..386,390,424,428,431,445,472)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132750"
     Site            order(395,398,402,407,412..413,415..416,419..420)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132750"
     CDS             1..596
                     /gene="NR2C2"
                     /coded_by="XM_041462623.1:748..2538"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 mtspsqriqi istdssvasp qriqivtdqq tgqkiqivta vdsavspkqq filaspdgtg
       61 agkvilaape tsnakqlift ttdnivpgri qivtdsasve rllgktdvqr pqvveycvvc
      121 gdkasgrhyg avscegckgf fkrsvrknlt yscrsnqdci inkhhrnrcq fcrlkkclem
      181 gmkmesvqse rkpfdvqrek ptncaastek iyirkdlrsp liatptfvad kdgtrsagll
      241 dpgmlvniqq plirddgtvl ltadskaets qgalgtlanv vtslanlses lnngdtseiq
      301 qeeqsaseit rafdtlakal ntadgttahn ladgmdptgg gnihvisrdq stpiievegp
      361 lltdthvtfk ltmpspmpey lnvhyicesa srllflsmhw arsipafqal gqdcntslvr
      421 acwnelftlg laqcaqvmnl stilgaivnh lqnsiqedkl sgdrikqvme hiwklqefcn
      481 smakldidgy eyaylkaivl fspdhpglts stqiekfqek aqmelqdyvq ktypedtyrl
      541 arilvrlpal rlmsssitee lfftglignv pidsiipyil kmetaeyngq itgmsa
//
LOCUS       XP_041318567             596 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318567
VERSION     XP_041318567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X2"
                     /calculated_mol_wt=65484
     Region          112..198
                     /region_name="NR_DBD_TR2_like"
                     /note="DNA-binding domain of the TR2 and TR4 (human
                     testicular receptor 2 and 4) is composed of two C4-type
                     zinc fingers; cd06967"
                     /db_xref="CDD:143525"
     Site            order(117,120,134,137,153,159,169,172)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143525"
     Site            order(127..129,135..136,138,140,143,146,166..167,170,173,
                     184,187)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143525"
     Region          361..582
                     /region_name="NR_LBD_TR2_like"
                     /note="The ligand binding domain of the orphan nuclear
                     receptors TR4 and TR2; cd06952"
                     /db_xref="CDD:132750"
     Site            order(385..386,390,424,428,431,445,472)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132750"
     Site            order(395,398,402,407,412..413,415..416,419..420)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132750"
     CDS             1..596
                     /gene="NR2C2"
                     /coded_by="XM_041462633.1:278..2068"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 mtspsqriqi istdssvasp qriqivtdqq tgqkiqivta vdsavspkqq filaspdgtg
       61 agkvilaape tsnakqlift ttdnivpgri qivtdsasve rllgktdvqr pqvveycvvc
      121 gdkasgrhyg avscegckgf fkrsvrknlt yscrsnqdci inkhhrnrcq fcrlkkclem
      181 gmkmesvqse rkpfdvqrek ptncaastek iyirkdlrsp liatptfvad kdgtrsagll
      241 dpgmlvniqq plirddgtvl ltadskaets qgalgtlanv vtslanlses lnngdtseiq
      301 qeeqsaseit rafdtlakal ntadgttahn ladgmdptgg gnihvisrdq stpiievegp
      361 lltdthvtfk ltmpspmpey lnvhyicesa srllflsmhw arsipafqal gqdcntslvr
      421 acwnelftlg laqcaqvmnl stilgaivnh lqnsiqedkl sgdrikqvme hiwklqefcn
      481 smakldidgy eyaylkaivl fspdhpglts stqiekfqek aqmelqdyvq ktypedtyrl
      541 arilvrlpal rlmsssitee lfftglignv pidsiipyil kmetaeyngq itgmsa
//
LOCUS       XP_041318576             569 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318576
VERSION     XP_041318576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X3"
                     /calculated_mol_wt=61925
     Region          334..555
                     /region_name="NR_LBD_TR2_like"
                     /note="The ligand binding domain of the orphan nuclear
                     receptors TR4 and TR2; cd06952"
                     /db_xref="CDD:132750"
     Site            order(358..359,363,397,401,404,418,445)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132750"
     Site            order(368,371,375,380,385..386,388..389,392..393)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132750"
     CDS             1..569
                     /gene="NR2C2"
                     /coded_by="XM_041462642.1:549..2258"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 matnmevlaq qvvetqqvae vptvqtslse spvmtspsqr iqiistdssv aspqriqivt
       61 dqqtgqkiqi vtavdsavsp kqqfilaspd gtgagkvila apetsnakql iftttdnivp
      121 griqivtdsa sverllgktd vqrpqvveyc vvcgdkasav qserkpfdvq rekptncaas
      181 tekiyirkdl rspliatptf vadkdgtrsa glldpgmlvn iqqplirddg tvlltadska
      241 etsqgalgtl anvvtslanl seslnngdts eiqqeeqsas eitrafdtla kalntadgtt
      301 ahnladgmdp tgggnihvis rdqstpiiev egplltdthv tfkltmpspm peylnvhyic
      361 esasrllfls mhwarsipaf qalgqdcnts lvracwnelf tlglaqcaqv mnlstilgai
      421 vnhlqnsiqe dklsgdrikq vmehiwklqe fcnsmakldi dgyeyaylka ivlfspdhpg
      481 ltsstqiekf qekaqmelqd yvqktypedt yrlarilvrl palrlmsssi teelfftgli
      541 gnvpidsiip yilkmetaey ngqitgmsa
//
LOCUS       XP_041318583             537 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318583
VERSION     XP_041318583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X4"
                     /calculated_mol_wt=58529
     Region          145..231
                     /region_name="NR_DBD_TR2_like"
                     /note="DNA-binding domain of the TR2 and TR4 (human
                     testicular receptor 2 and 4) is composed of two C4-type
                     zinc fingers; cd06967"
                     /db_xref="CDD:143525"
     Site            order(150,153,167,170,186,192,202,205)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143525"
     Site            order(160..162,168..169,171,173,176,179,199..200,203,206,
                     217,220)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143525"
     Region          394..>536
                     /region_name="NR_LBD"
                     /note="The ligand binding domain of nuclear receptors, a
                     family of ligand-activated transcription regulators;
                     cl11397"
                     /db_xref="CDD:472173"
     Site            order(419..420,423,426..427,456..457,460..461,464,467,508)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132726"
     Site            order(428,431,435,440,445..446,448..449,452..453)
                     /site_type="active"
                     /note="coregulator recognition site [active]"
                     /db_xref="CDD:132726"
     CDS             1..537
                     /gene="NR2C2"
                     /coded_by="XM_041462649.1:549..2162"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 matnmevlaq qvvetqqvae vptvqtslse spvmtspsqr iqiistdssv aspqriqivt
       61 dqqtgqkiqi vtavdsavsp kqqfilaspd gtgagkvila apetsnakql iftttdnivp
      121 griqivtdsa sverllgktd vqrpqvveyc vvcgdkasgr hygavscegc kgffkrsvrk
      181 nltyscrsnq dciinkhhrn rcqfcrlkkc lemgmkmesv qserkpfdvq rekptncaas
      241 tekiyirkdl rspliatptf vadkdgtrsa glldpgmlvn iqqplirddg tvlltadska
      301 etsqgalgtl anvvtslanl seslnngdts eiqqeeqsas eitrafdtla kalntadgtt
      361 ahnladgmdp tgggnihvis rdqstpiiev egplltdthv tfkltmpspm peylnvhyic
      421 esasrllfls mhwarsipaf qalgqdcnts lvracwnelf tlglaqcaqv mnlstilgai
      481 vnhlqnsiqe dklsgdrikq vmehiwklqe fcnsmakldi dgyeyaylka ivlfspg
//
LOCUS       XP_041318592             596 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 2 group C member 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318592
VERSION     XP_041318592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="nuclear receptor subfamily 2 group C member 2
                     isoform X2"
                     /calculated_mol_wt=65484
     Region          112..198
                     /region_name="NR_DBD_TR2_like"
                     /note="DNA-binding domain of the TR2 and TR4 (human
                     testicular receptor 2 and 4) is composed of two C4-type
                     zinc fingers; cd06967"
                     /db_xref="CDD:143525"
     Site            order(117,120,134,137,153,159,169,172)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143525"
     Site            order(127..129,135..136,138,140,143,146,166..167,170,173,
                     184,187)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143525"
     Region          361..582
                     /region_name="NR_LBD_TR2_like"
                     /note="The ligand binding domain of the orphan nuclear
                     receptors TR4 and TR2; cd06952"
                     /db_xref="CDD:132750"
     Site            order(385..386,390,424,428,431,445,472)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132750"
     Site            order(395,398,402,407,412..413,415..416,419..420)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132750"
     CDS             1..596
                     /gene="NR2C2"
                     /coded_by="XM_041462658.1:338..2128"
                     /db_xref="GeneID:121350861"
ORIGIN      
        1 mtspsqriqi istdssvasp qriqivtdqq tgqkiqivta vdsavspkqq filaspdgtg
       61 agkvilaape tsnakqlift ttdnivpgri qivtdsasve rllgktdvqr pqvveycvvc
      121 gdkasgrhyg avscegckgf fkrsvrknlt yscrsnqdci inkhhrnrcq fcrlkkclem
      181 gmkmesvqse rkpfdvqrek ptncaastek iyirkdlrsp liatptfvad kdgtrsagll
      241 dpgmlvniqq plirddgtvl ltadskaets qgalgtlanv vtslanlses lnngdtseiq
      301 qeeqsaseit rafdtlakal ntadgttahn ladgmdptgg gnihvisrdq stpiievegp
      361 lltdthvtfk ltmpspmpey lnvhyicesa srllflsmhw arsipafqal gqdcntslvr
      421 acwnelftlg laqcaqvmnl stilgaivnh lqnsiqedkl sgdrikqvme hiwklqefcn
      481 smakldidgy eyaylkaivl fspdhpglts stqiekfqek aqmelqdyvq ktypedtyrl
      541 arilvrlpal rlmsssitee lfftglignv pidsiipyil kmetaeyngq itgmsa
//
LOCUS       XP_041318605             173 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S25, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041318605
VERSION     XP_041318605.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462671.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..173
                     /product="28S ribosomal protein S25, mitochondrial"
                     /calculated_mol_wt=19791
     Region          41..108
                     /region_name="L51_S25_CI-B8"
                     /note="Mitochondrial ribosomal protein L51 / S25 / CI-B8
                     domain; smart00916"
                     /db_xref="CDD:197984"
     CDS             1..173
                     /gene="MRPS25"
                     /coded_by="XM_041462671.1:39..560"
                     /db_xref="GeneID:121350896"
ORIGIN      
        1 mpmkgrfpvr rtlqylsqgd ivfkssvkvm tvnyntagel segarkfvff nipqiqyknp
       61 wvqimlfrnm tpspflrfyl dsgeqvlvdv edktnkeite hvkkilgksk etlekeeger
      121 kklshpatfg pkkyhlrecm ceiegqvpcp afvplpkemr gkykaamkne aga
//
LOCUS       XP_041318617             101 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor suppressor candidate 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318617
VERSION     XP_041318617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462683.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="tumor suppressor candidate 2"
                     /calculated_mol_wt=11391
     Region          <32..100
                     /region_name="TUSC2"
                     /note="Tumour suppressor candidate 2; pfam15000"
                     /db_xref="CDD:464434"
     CDS             1..101
                     /gene="TUSC2"
                     /coded_by="XM_041462683.1:1..306"
                     /db_xref="GeneID:121350904"
ORIGIN      
        1 mglarrvrvp dgsasechpr alararaara atpfvftrrg smyydedgdl ahefyeetiv
       61 tkngrkrakl krihknlipq givklehpri hvdfpviice v
//
LOCUS       XP_041318629             328 aa            linear   VRT 06-MAY-2021
DEFINITION  ras association domain-containing protein 1, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318629
VERSION     XP_041318629.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462695.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..328
                     /product="ras association domain-containing protein 1"
     Region          35..87
                     /region_name="C1_RASSF1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Ras association domain-containing protein 1
                     (RASSF1) and similar proteins; cd20885"
                     /db_xref="CDD:410435"
     Region          121..274
                     /region_name="RA_RASSF1"
                     /note="Ras-associating (RA) domain found in
                     Ras-association domain-containing protein 1 (RASSF1);
                     cd17218"
                     /db_xref="CDD:340738"
     Site            order(138,140..141,154,194,196..201,203,220..222)
                     /site_type="other"
                     /note="putative RA-Ras interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340738"
     Region          280..324
                     /region_name="SARAH_SF"
                     /note="C-terminal SARAH domain found in scaffold protein
                     salvador (Sav), Ras-association domain proteins, and
                     mammalian STE20-like protein kinases (MST); cl45900"
                     /db_xref="CDD:459245"
     Site            order(281..282,284..286,289..290,292..293,296..297,
                     299..300,303..304,307..308,310..311,313..315,317..319,
                     321..322)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:439173"
     CDS             1..328
                     /gene="RASSF1"
                     /coded_by="XM_041462695.1:<1..987"
                     /db_xref="GeneID:121350911"
ORIGIN      
        1 pgrgrleran alrisparrp gpgahpdprl taapgaghrf eprrrglhtw cdlcgdfvwg
       61 ggrkslqcrh csftchyrcr alvqldcggp pgagdeddgn eqvlekdtnv depsewekte
      121 ldqaqveqri keynsqinsn lfmslnkdgs ytgfikvqlk lvrpvsvpat krvpslqagr
      181 phpqgvkrrt sfylpkgtvk hlhilshtra sevidallrk ftvidnprkf alfersekde
      241 qvylrklgdd eqplrlrlla gpsekvlsfi lkenetgevn wdafslpelh nfllilqree
      301 eehvrrlrhr yarcrqkmqe alaaltpg
//
LOCUS       XP_041318643            2153 aa            linear   VRT 06-MAY-2021
DEFINITION  dedicator of cytokinesis protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041318643
VERSION     XP_041318643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462709.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2153
                     /product="dedicator of cytokinesis protein 3"
                     /calculated_mol_wt=245623
     Region          105..160
                     /region_name="SH3_DOCK3_B"
                     /note="Src Homology 3 domain of Class B Dedicator of
                     Cytokinesis 3; cd12048"
                     /db_xref="CDD:212981"
     Site            order(107..111,118,123..125,127,131..132,136..137,139,147,
                     149,151,153,155..156,158,160)
                     /site_type="other"
                     /note="ELMO interaction site [polypeptide binding]"
                     /db_xref="CDD:212981"
     Site            order(110,112,115,119,136..137,153,155..156)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212981"
     Region          168..461
                     /region_name="DOCK_N"
                     /note="DOCK N-terminus; pfam16172"
                     /db_xref="CDD:465040"
     Region          475..664
                     /region_name="C2_Dock-B"
                     /note="C2 domains found in Dedicator Of CytoKinesis (Dock)
                     class B proteins; cd08695"
                     /db_xref="CDD:176077"
     Region          1290..1681
                     /region_name="DHR2_DOCK3"
                     /note="Dock Homology Region 2, a GEF domain, of Class B
                     Dedicator of Cytokinesis 3; cd11704"
                     /db_xref="CDD:212577"
     Site            order(1370,1380,1382..1383,1385..1386,1389..1390,
                     1392..1393,1396..1397)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:212577"
     Site            order(1408,1410,1434,1437..1440,1442..1443,1456..1458,
                     1475..1477,1511..1514,1525..1526,1529,1531,1568..1569,
                     1572,1593..1594,1596..1597,1600..1602,1605..1607,
                     1610..1611,1614,1644,1666,1669)
                     /site_type="other"
                     /note="putative Rac/Cdc42 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:212577"
     Site            1605..1610
                     /site_type="other"
                     /note="nucleotide sensor"
                     /db_xref="CDD:212577"
     Region          <1783..2101
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..2153
                     /gene="DOCK3"
                     /coded_by="XM_041462709.1:1..6462"
                     /db_xref="GeneID:121350918"
ORIGIN      
        1 mgaalpaglw glpgaaspal papldvlcvr lgsryfperr rgdarderss garagvgiaq
       61 iirkraaepl iylsarfpfp cvsicgarrc vdgefkvqet ylmvhgavic sfrgtvpqgl
      121 vlelgetvqi lekcegwyrg vsikkpsvkg ifpanyihlk kaivsnrgqy etvvpledsv
      181 vtevtatlqe wavlwkqlyv khkvdlfykl rhvmnelidl rrqllsghlt qdqvrevkrh
      241 ltvrldwgne hlgldlvprk dfevvdsdqi svsdlykmhl ssrhsvqqst sqvntihier
      301 fmvrlnkngg prnpekidrm calftdlssk dmkrdlyiva hvirigrmll ndskkgpphl
      361 hyrrpygcav lsimdvlqsi seikeekdfv lkvytcnnen ewcqihenii rksstkytap
      421 ssnygliisl qllrgdmeqi rrenpmifnr gvavtrklgf pdvimpemki vgcdirndly
      481 ltlekgdfer ggksvqknie vtmyvlyadg eilkdcislg sgepsrsayh sfvlyhnnsp
      541 rwgeiiklpi pidrfrgshl rfefrhcstk dkgekklfgf aftplmrddg ttlsddihel
      601 yvykcdenst fnnhalylgl pcckedyngc pnipsslifq rstketfsvs tqlsstkltq
      661 nvdllallkw kaypdrvmdi lgrlrhvsge eivkflqdil dtlfvvlddn tekygllvfq
      721 slvfiinllr dskyfhfrpv mdtyiqkhfa galaykelir clkwymdrsa elvrqdhiqe
      781 amraleylfk fivqsrilys ratcgmeeeq frssiqelfq sirfvlslds rssetliftq
      841 aallnsfpai fdellqmftv qevaefvrgt lgsmpstvhi gqsmdvvklq siartvdsrl
      901 fsfsesrril lpvvlhhihl hlrqqkelli csgilssifs iiktsslegd vveevemmve
      961 slldvllqtl ltimsksqsq eavrgqrcpq ctaeitgeyv scllsllrqm sdthfqhlld
     1021 nfqskdelke fllkifcvfr nlmkmsvfpr dwmvmrllts niivttvqyl ssalhknfte
     1081 tdfdfkvwns yfslavlfin qpslqlenat ppkrkkildk ygdmrvmmay elfsmwqnlg
     1141 ehkihfipgm igpflgvtlv pqpevrnimi pifhdmmdwe qrkngnfkqv eaelidklds
     1201 lvsegkgden yrelfslltq lfgpypslle kieqetwret gisfvtsvtr lmerlldyrd
     1261 cmkgdetenk kigctvnlmn fykseinkee myiryihklc dmhlqaenyt eaaftlllyc
     1321 ellqwedrpl reflhypsqs ewqrkeglcr kiihyfnkgk swefgiplcr elaiqyesly
     1381 dyqslswirk meatyydnim eqqrlepeff rvgfygrkfp fflrnkeyvc rghdyerlea
     1441 fqqrmlsefp qaiamqhpnh pddsilqcda qylqiyavtp ipdnidvlqm drvpdriksf
     1501 yrvnnirkfr ydrpfhkgpk dkenefkslw ierttltlth slpgisrwfe verrelvevs
     1561 plenaiqvve nknqelrtli sqyqhkqmhg ninllsmcln gvidaavngg iaryqeaffd
     1621 kdyitkhpgd aekitqlkel mqeqvhvlgv glavhekfvh pemrplhkkl idqfqmmrss
     1681 lyhelpgldk lspacsgsst prsnvlvshg pmspesiklv hrhsplnmlg svrhssssls
     1741 shtssetgnl viltdssvge taedmyhmqa spstsslsst hsapsqmins apssaralvk
     1801 gagltpleae alylpteqiq hgrqlckfph aapihvphlc pggttsrgsp slpdkyrhsr
     1861 emmmllpahr drpssamypa aimengqppn fqraliqqmi gpckpcsdpn lsvaekavpa
     1921 apsswsldsg srealpflsa hagsvlappv pprslphghy slhfdafhhq lsdappalpa
     1981 rtlrksplhp ipasptspqs gldgsnstls gsassgvssl sesnfghsse ppprtdtmds
     2041 vpsqawntde dletpylpvr yslsepdvle slksqpcrsh sapsgvipqd tmdppalppk
     2101 pyhsrlpnme neegmmiedd dkhrplhrkv sqpvsgakee qarvawehgi seq
//
LOCUS       XP_041318654             716 aa            linear   VRT 06-MAY-2021
DEFINITION  HAUS augmin-like complex subunit 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041318654
VERSION     XP_041318654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..716
                     /product="HAUS augmin-like complex subunit 3"
                     /calculated_mol_wt=81334
     Region          57..295
                     /region_name="HAUS-augmin3"
                     /note="HAUS augmin-like complex subunit 3; pfam14932"
                     /db_xref="CDD:464384"
     Region          <394..>545
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..716
                     /gene="LOC121350928"
                     /coded_by="XM_041462720.1:1..2151"
                     /db_xref="GeneID:121350928"
ORIGIN      
        1 mtpafsllgl tilamfswry sqafpldtvn gaadfiaklr liyphadtlc ekdfeclfdc
       61 petkqflewf csmvgeenvl spaeveayea llaagkpile gdaleealqk ccqvlwlpss
      121 ivdegpsqea lqqelqelkh hrdlqlwryr kllawtnklq qqqkymeeee kvvkqelrva
      181 hmdlkvkmfk travlsqvsk aakevsecpe nmgmgqlptl lcqmdlapyl kqeqqatdaf
      241 esfihqvlpe svhaadvwea saqgesslke gleaetqmds cceipeerrg apyqectktl
      301 cgvapasqgk liqgsktell veggnekdml smeseerdgs qevterrdsk ktstpkqeni
      361 nanslgtded elledqdnfw kelgrietah icaqrevivt aakvegtraa lewaqrtlea
      421 ledkqqavea elqgqdamlq rqlhalhfdi thaltqqllp llqaearclc lpilhklfsl
      481 eiarlqntar rqeqvaacll sqhshldlle lqlkrerkel eqkaawleki etvtresqtr
      541 lqkqqmyfrd agssqkghph kwidpkdlta vrlwdmvmgk dekkqpfhsy aalaakcsql
      601 vqdkraleaq leaptpqvsa lessmevlyh qlysssnqlq lsppetselm qqllimeddl
      661 yqkladllsd levkrrslen pilqaqrsly vyfycnearl reeveglekq aaassk
//
LOCUS       XP_041318666             914 aa            linear   VRT 06-MAY-2021
DEFINITION  putative RNA-binding protein 15B [Pyrgilauda ruficollis].
ACCESSION   XP_041318666
VERSION     XP_041318666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462732.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..914
                     /product="putative RNA-binding protein 15B"
                     /calculated_mol_wt=99606
     Region          174..260
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          359..443
                     /region_name="RRM2_RBM15B"
                     /note="RNA recognition motif 2 (RRM2) found in putative
                     RNA binding motif protein 15B (RBM15B) from vertebrate;
                     cd12556"
                     /db_xref="CDD:409972"
     Region          446..521
                     /region_name="RRM3_RBM15B"
                     /note="RNA recognition motif 3 (RRM3) found in putative
                     RNA-binding protein 15B (RBM15B) from vertebrate; cd12558"
                     /db_xref="CDD:409974"
     Region          744..912
                     /region_name="SPOC_RBM15B"
                     /note="SPOC (Spen paralog and ortholog C-terminal) domain
                     found in putative RNA binding motif protein 15B (RBM15B);
                     cd21550"
                     /db_xref="CDD:439213"
     CDS             1..914
                     /gene="RBM15B"
                     /coded_by="XM_041462732.1:1..2745"
                     /db_xref="GeneID:121350936"
ORIGIN      
        1 mtwrrppeap peprarrdea rqrprlepdr esssrrgphr ssgasrssrd kstpgggggg
       61 gggtttsssg ggggsssrsh rgderagggg dsnhrpagsg sasgarggsq aapsssssss
      121 sralgvpkak alpgavvaps lllagpppga apslllaplg gsaglagepp gsceyktllv
      181 sglsaalpdq lledglfrlf qrfagggagd isvklshtpe lgrvayvnfr hpgdardarr
      241 hararqllly drplkvepvy lrggrrsrtp ppapspeplg ylpplhsayq ykqrslspvt
      301 spllreprpr haaaaafale aaaiglsrer eraldyygly dergrpysyp ivaeedlmpe
      361 ddqratrnlf ignldhnvse velrrafeky giieevvikr pargqggaya flkfqnldma
      421 hrakvamsgr vvgrnpikig ygkanpttrl wvgglgpsts laalarefdr fgsirtidyv
      481 kgdsfayiqy esldaaqaac aqmrgfplgg perrlrvdfa kaeetrypqq yqpaplpvhy
      541 elladgysrh rsleqdlrvr drtpphllys drdrsfvead waspaknaer rnnlesysrs
      601 vrsrsgerwg sdgdrsvpkp weerrrrrsl ssdrgrtths pyedrsrtka sgpaldrspd
      661 rarkenhtte pgaekeqsns lqnnrhtaee kphrepadap qpkkrdsern hrtgeseskt
      721 heepksetkk lknlseyaqt lqlawngllv lknscfptsm hilegdlgvi ngllkdhssg
      781 gkltqlkiaq rlrldqpkld evtrrikqgs pngyavllat qsapaaagae gtfpvvepgl
      841 qrrllrnlvs ylkqkqaagv islpvggakg rdstgmlyaf ppcefsqqyl qsalrtlgkl
      901 eeehmviviv kdta
//
LOCUS       XP_041318678             253 aa            linear   VRT 06-MAY-2021
DEFINITION  cytokine-inducible SH2-containing protein [Pyrgilauda ruficollis].
ACCESSION   XP_041318678
VERSION     XP_041318678.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462744.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..253
                     /product="cytokine-inducible SH2-containing protein"
                     /calculated_mol_wt=28460
     Region          83..170
                     /region_name="SH2_CIS"
                     /note="Src homology 2 (SH2) domain found in
                     cytokine-inducible SH2-containing protein (CIS); cd10718"
                     /db_xref="CDD:198285"
     Site            order(95,113,115,123,136)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198285"
     Site            order(146,148,169)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198285"
     Region          213..253
                     /region_name="SOCS_CIS1"
                     /note="SOCS (suppressors of cytokine signaling) box of CIS
                     (cytokine-inducible SH2 protein) 1-like proteins. Together
                     with the SOCS proteins, the CIS/SOCS family of proteins is
                     characterized by the presence of a C-terminal SOCS box and
                     a central SH2 domain; cd03734"
                     /db_xref="CDD:239703"
     Site            order(214..219,225,230,236,241)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239703"
     CDS             1..253
                     /gene="CISH"
                     /coded_by="XM_041462744.1:464..1225"
                     /db_xref="GeneID:121350945"
ORIGIN      
        1 mllsdmilcv qgphpllaee kirtlslrgi eelsepimqp lpvmafqees apalaapvpd
       61 snppqtrdpe edllciaktf sylresgwyw gsitaseakq hlqkmpegtf lvrdsthpsy
      121 lftlsvktnr gptnvrieyt dskfrldsny lskprilafp dvvsliqhyv lsctteskte
      181 apypppsplp plqkelaaaa vhlklirplg rkdsmpslqh lcrlrinkct adveqlplpr
      241 rmgeylkqyp fql
//
LOCUS       XP_041318690             421 aa            linear   VRT 06-MAY-2021
DEFINITION  protein bassoon-like [Pyrgilauda ruficollis].
ACCESSION   XP_041318690
VERSION     XP_041318690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462756.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..421
                     /product="protein bassoon-like"
                     /calculated_mol_wt=44042
     Region          93..156
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cl28890"
                     /db_xref="CDD:333710"
     Site            order(114..119,124,143)
                     /site_type="other"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]"
                     /db_xref="CDD:277249"
     Region          364..>408
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cl28890"
                     /db_xref="CDD:333710"
     Site            order(383..388,393)
                     /site_type="other"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]"
                     /db_xref="CDD:277249"
     CDS             1..421
                     /gene="LOC121350951"
                     /coded_by="XM_041462756.1:1..1266"
                     /db_xref="GeneID:121350951"
ORIGIN      
        1 mfnwcntlrr peqldqaagq rsaspslaqt aassqsprem rgrgqpgpaa egprrtlqvd
       61 arsqgsgrsp svspdrgstp tspysvpqia plpsstlcpi cktteltssp gqpnfnactq
      121 chskvcnqcg fnpnphltqv kewlclncqm qralgmdmtt aprsksqqql hspspspsqs
      181 pakhpqppaa dktppaprpq pqeqpkpqpt tpqrephgqg qpkpqeaars spqhqarssp
      241 qhqqakpsps eqrktpgdag akpaapaaga gaaeqpqegl tgklfgfgas lltqastlms
      301 vqpeapapsq pspgkvppki vfsdaskeag pkapgaqgra gaaaaakpgk peqgvkpkev
      361 pkarvscplc kaeinvgsse ppnyntcttc rqqvcnmcgf nptphlvevs kgevmqvpvt
      421 n
//
LOCUS       XP_041318703            3378 aa            linear   VRT 06-MAY-2021
DEFINITION  protein bassoon [Pyrgilauda ruficollis].
ACCESSION   XP_041318703
VERSION     XP_041318703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462769.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 54% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3378
                     /product="protein bassoon"
                     /calculated_mol_wt=365766
     Region          <5..211
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <779..1045
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2331..>2417
                     /region_name="HMMR_N"
                     /note="Hyaluronan mediated motility receptor N-terminal;
                     pfam15905"
                     /db_xref="CDD:464932"
     Region          <2499..>2667
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <3134..>3340
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..3378
                     /gene="BSN"
                     /coded_by="XM_041462769.1:158..10294"
                     /db_xref="GeneID:121350958"
ORIGIN      
        1 mplptpkpps tgsprhqppv agqqraptpa pvpaepappe qqpsparslr aaeqsrtpsp
       61 apaekkpppp aekkppvpae ekplpkaape psrapesvpp kgksvtpkae verkesqalp
      121 eaprakeqed gskpyppdls rspqslsdtg yssdgisssq seitglvqqe eeklsstgla
      181 gqsppspsel tklessmrpl legrgaptqs persksrtep qedqrqqqrp rylsitpeaf
      241 dsdeeledil eedeewenqr erresaessd efgsklrhdy vedsseggfs pvpprtkgqe
      301 aevtdeefmr rqilemsaee dnleeeeegy grtkysipka gqkteaekgk epvsakrrlp
      361 hgassmytee skeveavegd dlstaqgglr rfktielnst agygremeig qepdasvdre
      421 pelemesltg speersrgey sstlpattps ytsgtsptsi ssleedsdss psrrqrleev
      481 kqqrkarhrs hgpllptied sseeeemree eellreqekm reveqqrirs tarktkrdke
      541 elraqrrrer sktppsnlsp iedaspteel rqaaemeelh rsscseysps idseaesfda
      601 vtsklyksgs eynlptfmsl ysptekvesa asqpiskplk saeeayeemm rkaemmqkqq
      661 vqqaqpassy sstyqqvgyr stegqngfdy qygeeyqydg gltrpsqpdy ssalpkagtv
      721 yeeilqtsqs isrmhqsssf dlalkqgekv kgqeevyqek rflnaesaya dllkqnggpl
      781 tpgtsptqls apvsfassds stgktipdvr vtqhfakegq dlgklqsapa apspvskatt
      841 tpyayskgts tvttaagspg salqsyssps peapsiagrt ytpskstvsy gsqtedttrt
      901 rtveisvqta rekipavsds kptlpktytf fkssspplsp tsptqsptrt tkataefstq
      961 tqspvlsydg pssaaagpdt sspmvaqgtq tphragsprl trqassqdsp fmvitlaada
     1021 asqtkpvssg altsptsspt rpsrqllahg ytqtpepeqq tsayiraqpv kdhaqkapav
     1081 tsaadgitgl yswgalpaen islcrissip gtsrvepgpk vpssnavdlr talksapiii
     1141 tdqgmdltsl atearkyclt ldhipnrqst aiqpliinln aqeqphaiia aaastaslai
     1201 aspmilsqsk qpmvygdpfq srvdfgqgtg spvclaqvkq veqgvqtatv rasgvasgkp
     1261 eptaapqtkf arygmpgqmv kkdvlltqtg gaqnasglpq sfppepgsev yravpvelks
     1321 qspllalggk ksqvmmvqme eaaagpvtkv lkeegpanvl dltgvkpesq vaccdmvykf
     1381 pfggsctgaf nptskmpekk tgeaavmpgr kaggpmygsr epelpetfpy reqpapapal
     1441 yeeqkfypas afgrlyssms dtnlseigms yyhtkgdqpf paaagdaavd lstmkhsysv
     1501 gfaeggylgq gpqygsfsdl rqpgellshp fpmrryssas niysdyrfsh rgdlasfqes
     1561 slahysatta reisrmcaal nsmdqyggrh angpdvlpyg pstgqgatag laaqqqgpvp
     1621 pkpsgmynpt fpegrqgfsn laqynvpgvr lgairqmlps tatvraadgm iystintpia
     1681 stlpittqpa svlrpmlrgl yrpygpggva avplaslarl pvvtprvpla aqglyrfpap
     1741 srpapaasmm etpvylgkpv astapaaaga apaakapaap aapasglqra epptaaprae
     1801 apaapaapke sgpvatvpkp pldgaqreer ereeerqrkq qehvlqlere rveleklrql
     1861 rlqeelerer aelqrhreke qllqqqeerh aqlalqreql aqqrlqlehi hqlqhqlqqq
     1921 leeqkrqkti fptpaeptar ppegpaeapr vlphngqawp ppgqtppegp agprypmpqr
     1981 plsssasdms lqveeswepg rgikkrnsmp rlrdayeket faarkmadss vqtdeedgee
     2041 rfmlsrrrrt rrstdcsvqt deedsgeweq pvrrrrsras rhteastegk tdgatrtasv
     2101 giqtisdcsv qtepdqllrv spsihitthd prveivkyis apektqrges lacqtepepa
     2161 pqpgvvvpql tvpttippys tnlqivstgp ldphtvrqqt lgkfekkkpd pleigyqshl
     2221 paeslsqlvt rqpprspqvl yspvsplsph rllessfats erlnkahvpp qkhfttdlaq
     2281 rqqtlprpik tmqrslsdpk pisptseeag kdrfslyqhp llpssqvggl qssslarkvk
     2341 rtlpspppee phvplaspaa sqlylsslap katapvtkas llkeldrdlr lveheatklr
     2401 kkqaeldeee keidaklkyl elgitqrkes llkdrvggrd hpylrypgdr rdylsdselh
     2461 slrlaaydsa glrpagqypd ytaaaaaaaa aaaaaasyga ypypapqgpa afppprlqhp
     2521 qyptastsqd glpaaplptf tspggfsapg taypelgtpa qpgfqpqnpy qapsafagaa
     2581 tvpaaqptly qspadvaggh qkprqtslad leqkiptnye vigaatsssa vpdvtfstap
     2641 asggyeqyka petraaerts tapgpsasys seslytsleq niprnyvmie diseltkesp
     2701 avdgqkaepv gtstdsrhsr eksdlgdteg sgrpccytka eeeseediyd hhgpdhrgkn
     2761 syyrgtesng rvsgsstsss yyygdseyrh ssrmdkhssg tplpkhsskn lapavisskr
     2821 skhrkqgmeq kiskfspiee akdvesdlas ystttsigss nvasrakklq deityglkkn
     2881 vyeqqkyygv ssrdlvdeee rvyssssrtr ssgygvekss sremggrsks yeresmersq
     2941 kvsskpssls msqsrgrapm rsqpseeesp vspmgksmgg srtaggpgpq sagdpcsqfc
     3001 sshslpdvqk hikdvprshs ykheegygmd dahcvvsdse ayhlgqeetd wfdkpreara
     3061 ervrhygghs ssqkrppvkh tyhdydeppd edpwqhddyp qhrehrhhre ydrhagssrh
     3121 asdepprrss kqhpresgrh eprghgpsag pkkaqqpesr apygpssady apssrpaahh
     3181 hgtetpkaqk psqphgsatp apkqeplthp qqpaarqqqa gqpaarqqpa arqaaqpass
     3241 aqpetrgrtq gppssrppqq qpgpaqaagk apatlhaqpg ghpapatkve ptdtskpaak
     3301 vpqqpgraps aqplgaaads kagpratgpr gpagmatgqp ggegesvfsk ilpggaaeqa
     3361 gklteavsaf gkkftsfw
//
LOCUS       XP_041318715             212 aa            linear   VRT 06-MAY-2021
DEFINITION  nicolin-1, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041318715
VERSION     XP_041318715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..212
                     /product="nicolin-1"
     CDS             1..212
                     /gene="NICN1"
                     /coded_by="XM_041462781.1:<1..639"
                     /db_xref="GeneID:121350968"
ORIGIN      
        1 gpgrsplpca prpaaplqla ggaeparpgv avidlrfprg aaadvqeivf rnfytaflsv
       61 rvqrpgpggs rrwvtclrdl clmpcphtee gsqdyfclhr hqmlcdvdqv tamrfilrqp
      121 spvwlhftie dlqifppgqk spqkdfpswl sqltppeqpa slhgelpdpe kvstevqqmw
      181 vltevirarq aaarigrfdv dgcydvnlls yt
//
LOCUS       XP_041318730             811 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: cadherin-related family member 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318730
VERSION     XP_041318730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462796.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..811
                     /product="LOW QUALITY PROTEIN: cadherin-related family
                     member 4"
                     /calculated_mol_wt=87108
     Region          287..367
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          490..589
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(495..496,548,550,586,588..589)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     CDS             1..811
                     /gene="CDHR4"
                     /coded_by="XM_041462796.1:1..2436"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 3 bases in 2 codons;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121350974"
ORIGIN      
        1 mprhcqdlag asfgitvayp dttgvssehl tegilsassp qgiarahlag xgdtllfagt
       61 fvratvlpdl prvvalsedt vpgtritevt vscsnssssp nvtldsiepd hpfnsiaiss
      121 dptdattfra evtlragael darrvnqytl ilraacpged eveerlfvrv taghvlrcdt
      181 pfasaegdvv qvladvaprt plyavlpqpl gglafrlrnh ntpltltrwg lvlapdngfd
      241 pskdtqtfrl eievmdrhgh ncsgavrvev lpsqrprvtf pephwavtvt egigplevvt
      301 qvhargdnvr yailapvapt lftidevtge irstlrlevi hvhllirayn alhpddhata
      361 tvnvtvqgtd rqaprcdpai fvsqvaetes lgstlvtlrc tdststdgcl hyalegppss
      421 rshfcmegpq lkvnstldyd seamaalgfq ltativvtvg gqplqstrvp vlvtvtpvne
      481 frpacpsgat ftvpetaafg smvgrvagtd rdypldsley slegepgpaq pfsidrrtge
      541 irvvgpldsq qqksyrlvvr ltdthndldl rkrqsrlcdv svrlqavpdq lpvcipevqe
      601 lritagspgs rqpvtrlvch ggpdsavlty sivggnedgr frlegstlvy lpsdraephp
      661 fvllvevggg sggrrrsivv alvvhvtprs tpvppststq httlqkeplv vtqteavwhp
      721 pawfvavlti sgvlllatlg cmarnllcsn rapgklllak sswdvvensr gkeeqghphs
      781 snpgqfdgha qdprtgrdyv fssvtgaqrw i
//
LOCUS       XP_041318741             978 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar protein 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041318741
VERSION     XP_041318741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462807.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..978
                     /product="nucleolar protein 8"
                     /calculated_mol_wt=108894
     Region          9..88
                     /region_name="RRM_NOL8"
                     /note="RNA recognition motif (RRM) found in nucleolar
                     protein 8 (NOL8) and similar proteins; cd12226"
                     /db_xref="CDD:409673"
     CDS             1..978
                     /gene="NOL8"
                     /coded_by="XM_041462807.1:69..3005"
                     /db_xref="GeneID:121350980"
ORIGIN      
        1 mekeqvskrl yvgglghtvs raeleerfgk fgrvldteii trkddqgnpv ktfayisvni
       61 sdadlkkcms vlnktkwkgg tlqielakes flhrlamere eaklqkekpq rndqmclles
      121 lkkkgvvdfh mravpgtevp dhkkwvvgkf grvlpilhlr nqqknklvky dpskychnlr
      181 klepelahaa pvsqltwsle ggddsvprkr pgefpgtrkp pekrrqlgre alngaalsse
      241 cpsgpkhtds pqlshrakpr pgeelelppa krldgkiskn angvtaknnt svsdsdidse
      301 eeiramvkke terqkaenve tenehleivg dnfelkyssh wslnnldamk naikgsnkek
      361 envecdngyd sadtdeiiae sktpedskqg kvenkevlak kksgvvngss lkprslkeer
      421 ierkekikks rmaalqstaa ssttetcdsd ssssesekge seissdyesm mqncyrldlt
      481 lddlkalate ntgtpaewsg seqspcqssv ednpkdntvn kskppkfhpa vkkkticped
      541 vladilagee daveesskgq nnshlkyqpf rgmgslcvke lskdstglkk ksveslgvea
      601 ctsyfgeess knqpknhplc slevsnkkrh kmpfeqheel saaassagqr lqpgsrphlq
      661 gknkgvsslq dqnlehraaa astdhgdgss gtdsdaagaq ehvkqqlksp kllsktlkrn
      721 tskktpeyeg nkggngntsl ledkelclra aaskepstie kqlqdnqrrl aaleerqrer
      781 elqkkliqga lsnldrqpag qhkhiifdsd vedkaevdem lkkdaslgng hgedksaakp
      841 sgrlfessed eqedtdderf kikpqfegka gekllqmqsr fgtderfrmd arflesdsee
      901 eaetnslkad eeeelaaekk knlqilgsll ninleqpkpn ktvtsvkkfk dinalrydpt
      961 redhavferk psateker
//
LOCUS       XP_041318753            3125 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type receptor 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041318753
VERSION     XP_041318753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462819.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3125
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3125
                     /product="LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass
                     G-type receptor 3"
                     /calculated_mol_wt=344587
     Region          94..193
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(100..101,156,158,189,191..192)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          201..301
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(208..209,262,264,297,299..300)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          310..407
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(316..317,369,371,403,405..406)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          415..512
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(422..423,475,477,508,510..511)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          520..614
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(527..528,580,582,610,612..613)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          622..717
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(629..630,680,682,713,715..716)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          725..823
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(732..733,786,788,819,821..822)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          831..925
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(838..839,891,893,921,923..924)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          945..1026
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1190..1225
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1235..1267
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1270..1453
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          1479..1509
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          1546..1674
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          1700..1732
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          <1739..1828
                     /region_name="TNFRSF"
                     /note="Tumor necrosis factor receptor superfamily
                     (TNFRSF); cl22855"
                     /db_xref="CDD:473981"
     Region          1827..1872
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(1827,1829,1839,1846,1848,1857)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1876..1937
                     /region_name="HormR"
                     /note="Domain present in hormone receptors; smart00008"
                     /db_xref="CDD:214468"
     Region          1954..2199
                     /region_name="GAIN"
                     /note="GPCR-Autoproteolysis INducing (GAIN) domain;
                     pfam16489"
                     /db_xref="CDD:465137"
     Region          2225..2276
                     /region_name="GPS"
                     /note="G-protein-coupled receptor proteolytic site domain;
                     smart00303"
                     /db_xref="CDD:197639"
     Region          2285..2537
                     /region_name="7tmB2_CELSR3"
                     /note="Cadherin EGF LAG seven-pass G-type receptor 3,
                     member of the class B2 family of seven-transmembrane G
                     protein-coupled receptors; cd15993"
                     /db_xref="CDD:320659"
     Region          2287..2312
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320659"
     Site            order(2292,2296,2338,2341..2342,2345,2352,2359,2431..2432,
                     2434,2436,2488,2491,2503,2507)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320659"
     Region          2321..2343
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320659"
     Region          2352..2379
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320659"
     Region          2391..2411
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320659"
     Region          2428..2457
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320659"
     Region          2469..2496
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320659"
     Region          2500..2525
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320659"
     CDS             1..3125
                     /gene="CELSR3"
                     /coded_by="XM_041462819.1:35..9412"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121350991"
ORIGIN      
        1 maaaeepvaa psrsccrrrr epppplllvl lpllllplfp sglgatappp pagwgpapap
       61 psrarxplvp apapgrrgrr aapnrhplfp qynyqaevae nqpagtavva vtaqdpdgge
      121 agrlvysmda lmnsrsrdlf sidpraglis ttqaldresm dlhyfrvtat dhgaprlsat
      181 tmvaitvadr ndhdpvfeqg eyretirenv eegypilqlr atdvdslpna niryrfvner
      241 aaydifeidp rsglittsgp vdrekmekys lvveandqgs epgprsatvk vyitvldend
      301 nipqfsekry ivqvredirp hteilrvtat dldkdnnalv hyniisgnsr gqfsidsvtg
      361 eiqvvapldf evereyalri raqdagrppl snntgmasiq vvdindhapi fvstpfqisv
      421 lenaplghsv ihiqavdady gensrleykl tgvsadtpfv vnsatgwitv sgpldresve
      481 hyffgveahd hgspslsasa svtitvmdvn dnrpeftqke yfirlnedaa vgtsvlsvta
      541 vdrdvnsait yqitggntrn rfsistqggl glitlslpld ykqerryvlt vtasdrtlrd
      601 nchvhinitd anthrpvfqs ahysvsined rpvgstvvvi satdddvgen arityyledn
      661 vpqfridpds gaitlqaeld yedqvtytla itakdngipq kadttyveim vndvndnapq
      721 fvsphyqgvi sedappftsv lqisatdrda htngrvqytf qngedgdgdf tieptsgiir
      781 tvrrldrenv pvyeltayav drgippqrtp vhiqvtiqdv ndnapvfpae efevlvkens
      841 ivgsvvaqit avdpdegpna qimyqivegn ipeifqmdif sgeltalidl dyetkseyvi
      901 vvqatsaplv sratvhikll dqndnspvlk nfqilfnnyv snksntfpsg vigkvpaydp
      961 dasdhlfytf ergnelhlli vnqtsgelrl srkldnnrpl vasmlvtvtd gihsvtaqcv
     1021 lrviiitedm lansitvrle nmwqerflsp llstflegva tvlatpkedi fifniqndtd
     1081 vggtvlnvsf salapwggry fsseelqeql ymkrmvltgt smlevlpfdd nvclrepcqn
     1141 ymkcisvlkf dssapfiash stlfrpihpi aglrcrcpqg ftgdycetei nlcysnpcln
     1201 ggictrkegg ytcvcrqhfs gencevdsra grcvpgvcrn ggtctdgadg gfrcqcpagg
     1261 fetpfcevst rsfpprsfim frglrqrfhl tlalsfstve pgglllyngr lnerhdflav
     1321 eiiqgqvqlk ystgesstvv spylpggvsd gqwhtlqlry ynkpkvstlg vvqgpskdkv
     1381 ailtidecda svalqfgsei gnyscaaegv qtsskksldl tgplllggvp nlpenfpith
     1441 rdfvgcmrdl fidskridla syianngtaa gchakhtfcd snpcknggtc svswgtyscl
     1501 cpigfggkdc rhamhhahyf qgnsvlswdf kadvkisvpw flglafrtrq qdgvllqaha
     1561 gqyttllcql aggllsfmvs rgsgrstsll ldqlqlsdgk whdlqlelrd vhsgrdsryv
     1621 itltldfgly qdtvvvgnel hglkvkhlhv ggvlgsgevq nglrgciqgv rlgdsvtgiv
     1681 lpkpshalrv eagcsvpspc dsnpcpansv ckdewqsysc vcqpgyyggd cvdvchlnpc
     1741 knksvcrrkp gsrlgyvcec sgnffgqyce hridqqcpkg wwgnptcgpc ncdvnkgfdp
     1801 dcnktngqch ckdfhyrprg sdtclpcdcy pvgstsrscd retgrchcrp gvigrqcnsc
     1861 dspfaevtps gcqvlydgcp kslkagvwwp qtkfglsavv lcpkgslgaa irhcdeekgw
     1921 lepdlfncts pafkelsvll eglernktel ntieakklah rlravtdhme hyfgndvhia
     1981 frllsrlmaf esqqrgfglt atqdahfnen llragssvla penrehwaml phgehgsasl
     2041 meqlrnysgt lasnmkltyl npvgvvtpni mlsidrmenh shirrrypry hsslfrgqpa
     2101 wdphthvvlp lsvlsppkae avptavptla ggegnytven ssprqalpep eptltvvili
     2161 myrtlggllp aryqvdrrsv rlpknpvmns pivsvsvfsn htflqgpldt plvlefylle
     2221 tanrskplcv qwnhsnltnp sgfwtardce lvyrntthvh cqcsqfgtfg vlmdsshreq
     2281 legdletlai vtyslvslsl vsllltfsfl tclkglksnt rgihsnisit lffsellfll
     2341 ginrtenqfl ctviaillhc fflstfawlf vqglhiyrmq tearnvnfga mrfyyaigwg
     2401 vpaiitglav gldpegygnp dfcwisihdk lvwsfagpit vvivmngvmf llvakmscsp
     2461 gqketkkksv lmtlrssfvl llvisttwlf gllavnnsvl afhyfytvlc slqglavlvl
     2521 fcvlneevre awqlaclskk gqseeatrst qgpnaynnta lfeesgliri tlgastvssv
     2581 ssvrsarths sqraylrdnv aarqgsaldh sllahagptd idmamfhrda ggdqdsdsds
     2641 dlsldeersl sipsseseen vrlrgrfqrq lkraahserl ltnpanntpk dvdgndlmsy
     2701 wpalgecevh pcslqkwgse rklgfdinkd aannnqpdla ltsgdenslt qtqrqrkgil
     2761 knrlqypptl qglpsvgrmt neltwyktst lghravpaas ygriysgags lsqpasryss
     2821 reqldmlmrr qmsreqlsrh nsgecleavp srhgsreeld tipsrhgste hlesipsrha
     2881 srenldllaa rrsqrdhgnt lprrqgsrdc ldtlpcrfgs reqldcgpvr evsrewlntl
     2941 psrqvsrdqi dmlpsrdtsr eqldllsrkq psrdllasar qasreqldfl srrsnsrepl
     3001 dtvpsrqpsq dnlgslsrrq lsreslepls rrqhsrenle aipsrhpste qldilssila
     3061 sfnssvlssv qssstpsgpq ttatpsamqt stpsavcpst phsatshsis elspdseimr
     3121 ndghs
//
LOCUS       XP_041318763             713 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 26 member 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041318763
VERSION     XP_041318763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..713
                     /product="solute carrier family 26 member 6"
                     /calculated_mol_wt=77756
     Region          58..694
                     /region_name="sulP"
                     /note="high affinity sulphate transporter 1; TIGR00815"
                     /db_xref="CDD:273284"
     CDS             1..713
                     /gene="SLC26A6"
                     /coded_by="XM_041462829.1:1..2142"
                     /db_xref="GeneID:121350996"
ORIGIN      
        1 maaemalshr aprevlseae leevaqrkpp tkpslrgclr ktrcsgsaak sllfrflpfl
       61 rwlprypikd wlvgdivsgf svgimhlpqg layallaglp pvtglyssfy pvflyfffgt
      121 srhnsvgpfa visvmigslt eslvpsedfl esvngsnatv neelrdatrv elvatitvlt
      181 gifqvalgll qfgfvvtyls dplvrgytta asvhvlvsql knvfgvsqge ssgplslfvt
      241 fidlckklpq tnvgtlvtai iamvailivk elnhkfaakl pmpipielit iivstgisyg
      301 vnlkdkfgis vvgnipsglk ppvapnmsyf gqvagnafai avvgyaicis lgkifalkhg
      361 ykvdsnqeli alglcnflgg ffqcfaiscs msrslvqest ggnsqvagvi aslvilvtil
      421 kigelfrdlp kailaaiiiv nlkgmfkqfk dlstlwksnk vdllvwvvtf iatlllnldi
      481 glaasvafgl ltvifrtqlp hysilgrisd tdvyrdvvey emaqevpgvk ifrssstiyf
      541 anvelyaeal kkksgidvdr liekkkkalk klkkqqkkle kekakrkkna eddpglavie
      601 lsagqssaps eptlhslglp qpsfhavild fspvsfvdtv sikilknifr dfheievdvf
      661 iaccpvsvla qlergnffss titkhsffps vhdavlhisr erhqapvehs trm
//
LOCUS       XP_041318772             906 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041318772
VERSION     XP_041318772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..906
                     /product="RNA-binding protein 5 isoform X1"
                     /calculated_mol_wt=104076
     Region          186..272
                     /region_name="RRM1_RBM5"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding protein 5 (RBM5); cd12752"
                     /db_xref="CDD:410146"
     Region          274..303
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          278..297
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          322..407
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <484..>552
                     /region_name="PRK10856"
                     /note="cytoskeleton protein RodZ"
                     /db_xref="CDD:236776"
     Region          546..601
                     /region_name="OCRE"
                     /note="OCRE domain; cl23757"
                     /db_xref="CDD:304914"
     Region          551..558
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293880"
     Region          559..566
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293880"
     Region          567..574
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293880"
     Region          575..581
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293880"
     Region          583..590
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293880"
     Region          835..878
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     CDS             1..906
                     /gene="RBM5"
                     /coded_by="XM_041462838.1:130..2850"
                     /db_xref="GeneID:121351004"
ORIGIN      
        1 mgsdkrvsrt ersgrygsiv eredrderes rsrrrddykr sseerrgdry ddyrdydsrd
       61 ydsrdydsrd srdcrdydsr dydsrdsrvc rdydsrdsrd crdydsrdcr dydsrdsrdy
      121 dcrdydsrdc rdydsrdsrd ydrdydsrdy dsperererr nsdksedgyh sdgdygehdy
      181 rndindekes ktimlrglpi tvtendirel iesfegpqpa dvrlmkrktg vsrgfafvef
      241 yhfqdatswm eanqkklviq gkqiamhysn prpkfedwlc nkcclynfrr rlkcfrcgad
      301 kfdseqevpp gaaeavqsvd yycdtiilrn iaphtvvesi mtalspyasl avnnirlikd
      361 kqtqqnrgfa fvqlssamda sqllqilqsl qpplkidgkt igvdfaksar kdlllpdgnr
      421 vsafsvasta iaaaqwsstq pqtgegstld ysylqsgqdg ysqyaqysqd yqqyyqnqgg
      481 vldtdtatis gapvttttaa vvsqspqlyn qqtnspdspt qsappttstq aqaapptgvv
      541 pgtkyavpdt styqydessg yyydpitgly ydpnsqyyyn altqqylywd geketympaa
      601 egvtyqqtat ttttkevkek kekpksktaq qiakdmerwa kslnkqkenf knsfqplstr
      661 eeerkesaaa dagfalfekk galserqqil pevlkngdde nplkrglvaa ysgdsdnded
      721 llermeneee kltdwkkmac llcrrqfpnk dalirhqqls dlhkqnmdiy rrsklseqel
      781 ealelrerem kyrdraaerr ekygipeppe pkrkkvydag tvnyeqptkd gldnsnignk
      841 mlqamgwreg sglgrkcqgi tapieaqvrm rgaglgakgs sygvstadsy kdavrkamfa
      901 rfteme
//
LOCUS       XP_041318780             858 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318780
VERSION     XP_041318780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..858
                     /product="RNA-binding protein 5 isoform X2"
                     /calculated_mol_wt=98472
     Region          186..224
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          226..255
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          230..249
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          274..359
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <436..>504
                     /region_name="PRK10856"
                     /note="cytoskeleton protein RodZ"
                     /db_xref="CDD:236776"
     Region          498..553
                     /region_name="OCRE"
                     /note="OCRE domain; cl23757"
                     /db_xref="CDD:304914"
     Region          503..510
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293880"
     Region          511..518
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293880"
     Region          519..526
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293880"
     Region          527..533
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293880"
     Region          535..542
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293880"
     Region          787..830
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     CDS             1..858
                     /gene="RBM5"
                     /coded_by="XM_041462846.1:130..2706"
                     /db_xref="GeneID:121351004"
ORIGIN      
        1 mgsdkrvsrt ersgrygsiv eredrderes rsrrrddykr sseerrgdry ddyrdydsrd
       61 ydsrdydsrd srdcrdydsr dydsrdsrvc rdydsrdsrd crdydsrdcr dydsrdsrdy
      121 dcrdydsrdc rdydsrdsrd ydrdydsrdy dsperererr nsdksedgyh sdgdygehdy
      181 rndindekes ktimlrglpi tvtendkklv iqgkqiamhy snprpkfedw lcnkcclynf
      241 rrrlkcfrcg adkfdseqev ppgaaeavqs vdyycdtiil rniaphtvve simtalspya
      301 slavnnirli kdkqtqqnrg fafvqlssam dasqllqilq slqpplkidg ktigvdfaks
      361 arkdlllpdg nrvsafsvas taiaaaqwss tqpqtgegst ldysylqsgq dgysqyaqys
      421 qdyqqyyqnq ggvldtdtat isgapvtttt aavvsqspql ynqqtnspds ptqsapptts
      481 tqaqaapptg vvpgtkyavp dtstyqydes sgyyydpitg lyydpnsqyy ynaltqqyly
      541 wdgeketymp aaegvtyqqt atttttkevk ekkekpkskt aqqiakdmer wakslnkqke
      601 nfknsfqpls treeerkesa aadagfalfe kkgalserqq ilpevlkngd denplkrglv
      661 aaysgdsdnd edllermene eekltdwkkm acllcrrqfp nkdalirhqq lsdlhkqnmd
      721 iyrrsklseq elealelrer emkyrdraae rrekygipep pepkrkkvyd agtvnyeqpt
      781 kdgldnsnig nkmlqamgwr egsglgrkcq gitapieaqv rmrgaglgak gssygvstad
      841 sykdavrkam farfteme
//
LOCUS       XP_041318793             781 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3F isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041318793
VERSION     XP_041318793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..781
                     /product="semaphorin-3F isoform X1"
                     /calculated_mol_wt=87759
     Region          48..544
                     /region_name="Sema_3F"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 3F (Sema3F); cd11254"
                     /db_xref="CDD:200515"
     Site            order(105..108,194..195,199,220,222..223,230,240,243..244,
                     246,251,280,303..307,309,425,429,432)
                     /site_type="other"
                     /note="putative plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200515"
     Site            order(281..283,286..288,322,325..326,328,330,334,357..364,
                     390..393,438,453)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200515"
     Region          543..>570
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          604..695
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          604..610
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409455"
     Region          615..623
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(617,662)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          629..635
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          637..640
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          650..654
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          657..664
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          670..679
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          682..695
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..781
                     /gene="SEMA3F"
                     /coded_by="XM_041462859.1:189..2534"
                     /db_xref="GeneID:121351019"
ORIGIN      
        1 mpvvgvllwa tlltlgwraa hpkdhgfatp rvqlsfkelk atgtahffnf llnssdyril
       61 lkdedhdrmy vgskdyvlsl dlhdinrepl iihwpasqqr ieecilsgkn sngecgnfir
      121 liqpwnrthl yvcgtgaynp icafvnrgrk aqgfppsqpg grgsrstdsp lsprpaqskd
      181 yifylepdkl esgkgkcsyd pkvdtvsali neelyagvyi dfmgtdaaif rtmgkqtamr
      241 tdqynsrwln dpafvraqli pdssernddk lyfffreksa daplspgvys rigriclndd
      301 gghcclvnkw stflkarlvc svpgpdgiet hfdelqdvfi qqtqdtknpv iyavfsasgs
      361 vfkgsavcvy smadirmvfn gpfahkegpn yqwmpytgkm pyprpgtcpg gtftpsmkst
      421 kdypdevinf mrahplmyha vypthrqplv vrtnvnyrft tvavdqvdaa dgryevlflg
      481 tdrgtvqkvi vlprddmete elmleeievf kvpapiktmt isskrqqlyv ssavgvthla
      541 lhrcdvygea cadcclardp ycawdgsact rysasskrrs rrqdvrhgnp irqcrgynsn
      601 ankntveavq ygvegstafl ecqprspqas vkwllqkdns drrkelrveg rvlrteqgll
      661 lralqlgdsg lysctatenn fkhtvtkvql rvlssravht vlvqaetppg lpgaptpryq
      721 dllqllsqpe mglldqycqg ywrhtaaspp qplaglkake qqdqkkprnr rnhqpetygh
      781 t
//
LOCUS       XP_041318798             754 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3F isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318798
VERSION     XP_041318798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..754
                     /product="semaphorin-3F isoform X2"
                     /calculated_mol_wt=85025
     Region          48..517
                     /region_name="Sema_3F"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 3F (Sema3F); cd11254"
                     /db_xref="CDD:200515"
     Site            order(105..108,167..168,172,193,195..196,203,213,216..217,
                     219,224,253,276..280,282,398,402,405)
                     /site_type="other"
                     /note="putative plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200515"
     Site            order(254..256,259..261,295,298..299,301,303,307,330..337,
                     363..366,411,426)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200515"
     Region          516..>543
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          577..668
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          577..583
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409455"
     Region          588..596
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(590,635)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          602..608
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          610..613
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          623..627
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          630..637
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          643..652
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          655..668
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..754
                     /gene="SEMA3F"
                     /coded_by="XM_041462864.1:189..2453"
                     /db_xref="GeneID:121351019"
ORIGIN      
        1 mpvvgvllwa tlltlgwraa hpkdhgfatp rvqlsfkelk atgtahffnf llnssdyril
       61 lkdedhdrmy vgskdyvlsl dlhdinrepl iihwpasqqr ieecilsgkn sngecgnfir
      121 liqpwnrthl yvcgtgaynp icafvnrgrk aqdyifylep dklesgkgkc sydpkvdtvs
      181 alineelyag vyidfmgtda aifrtmgkqt amrtdqynsr wlndpafvra qlipdssern
      241 ddklyfffre ksadaplspg vysrigricl nddgghcclv nkwstflkar lvcsvpgpdg
      301 iethfdelqd vfiqqtqdtk npviyavfsa sgsvfkgsav cvysmadirm vfngpfahke
      361 gpnyqwmpyt gkmpyprpgt cpggtftpsm kstkdypdev infmrahplm yhavypthrq
      421 plvvrtnvny rfttvavdqv daadgryevl flgtdrgtvq kvivlprddm eteelmleei
      481 evfkvpapik tmtisskrqq lyvssavgvt hlalhrcdvy geacadccla rdpycawdgs
      541 actrysassk rrsrrqdvrh gnpirqcrgy nsnankntve avqygvegst aflecqprsp
      601 qasvkwllqk dnsdrrkelr vegrvlrteq glllralqlg dsglysctat ennfkhtvtk
      661 vqlrvlssra vhtvlvqaet ppglpgaptp ryqdllqlls qpemglldqy cqgywrhtaa
      721 sppqplaglk akeqqdqkkp rnrrnhqpet yght
//
LOCUS       XP_041318806             769 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3G [Pyrgilauda ruficollis].
ACCESSION   XP_041318806
VERSION     XP_041318806.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462872.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="semaphorin-3G"
                     /calculated_mol_wt=86679
     Region          40..512
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          511..548
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          574..665
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          574..580
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409455"
     Region          585..593
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(587,632)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          599..605
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          607..610
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          620..624
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          627..634
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          640..649
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          652..665
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..769
                     /gene="SEMA3G"
                     /coded_by="XM_041462872.1:11..2320"
                     /db_xref="GeneID:121351034"
ORIGIN      
        1 mraavavsls lcwlwaaghs lprlrlsyre llgtnrsvpf fgrrgflgfr slyldeyrdr
       61 lfiggkdvly sllldgatad akeiywpprp gqteecfqkg kdpgtdcany vrvlqpynrt
      121 hllacgtgaf hpmctfiyvg hrgehtfsld aasvesgrgr cphepsrafa stviggelya
      181 gltadflgrd pgvfrsmgtr salrtevdqr llhdpkfvaa hlipdnddrd ndkayfffte
      241 kvgeadskeh aivsrvgrvc vndaggqrvl vnkwstfnka rlvcsvpgpg gidtyfdele
      301 dvfllrtkdg kspeiyalfs tvshvfrgsa vcvyrmadir evfngpfahr dsphhqwgay
      361 egrvpyprpg vcpskttnqp rrqygttkdf pdevlhfara hplmyrpvhp rqrrpllvkt
      421 dlphrlrqlv vdrveaedgq hdilflgtda gsvlkvvvmq ktspamteev ileelqvfkm
      481 pvpitqmeis vkrqtlyvgs slgvaqvrlh qcesygtaca ecclardpyc awdgtacthy
      541 qpsgkrrhrr qdahhgnpah qcldqnltvd dfesveekvl ygaednstfl ecaprspqas
      601 vqwfvqrppd eqrdevktde rilqtehgll frrlhrrdag iyycktlehg ftqtvaktal
      661 qvipseqlah afprgrgdel phllcpeprl vpqppktwfk dimhlvssqn prrveeycar
      721 lwcssrphhr kgklaqaklv lagvdvakkg rtakahsern rvprqapaa
//
LOCUS       XP_041318818             759 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3B [Pyrgilauda ruficollis].
ACCESSION   XP_041318818
VERSION     XP_041318818.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462884.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..759
                     /product="semaphorin-3B"
                     /calculated_mol_wt=85705
     Region          44..514
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          513..>549
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          576..661
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          583..591
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(585,630)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          597..603
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          605..608
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          618..622
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          625..632
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          638..647
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          650..661
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..759
                     /gene="SEMA3B"
                     /coded_by="XM_041462884.1:112..2391"
                     /db_xref="GeneID:121351042"
ORIGIN      
        1 msrtllllll llrglaagrp psaatprlkl sfpelrarhg lrlfslehsc cyeallldee
       61 rgrlfvgaqn hllslalddi sqrdrkiywp apvewreecn wagkditaec mnfvkilhpy
      121 nrthlyacgt gafhpvcafi eagqhaeepv fkldphhted gkgkspydpr htaasvlvge
      181 elysgvatdl mgrdftifrs lgrrpsirte qhdsrwlnep kfvavfwvpe sedpdddkiy
      241 fffretaver qqglgktsfa rigqicrndm ggqrslvnkw ttflkarlvc avpgpdgadt
      301 hfdelrdvfl lqtrdkrnpl iyaifstsss vfqgsavcvy tmadirrafl gpfahkegpn
      361 yqwvsyqgrv pyprpgmcps ktfgtfgstk dfpdeviqfa rhhplmynpv lphgqrplfl
      421 qatmpytftr iavdrvtaad ghydvlfigt dvgtvlkvvs vpkeswhrme pllleelqvf
      481 qdaspiislq lsskrhqlya gsttalaqlp lhrcgaygka caecclardp ycawdgntct
      541 ryvpntkrrf rrqdvrngdp nvlcsedprr dtvpqkqlyg vegstvflec ipkslqaril
      601 wtyqrtlndp qrevqmderv vrtergvllr svqrsdagly lchatehgft qpllrlslev
      661 igawqatgva sagepqlaag ipgrkvwyrd flqlverppl gatdkvcqrl wsrgrppppp
      721 rapagppgrg qgeeprrarr rrthegprae rgprsaspw
//
LOCUS       XP_041318832             527 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318832
VERSION     XP_041318832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462898.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..527
                     /product="protein mono-ADP-ribosyltransferase PARP3
                     isoform X1"
                     /calculated_mol_wt=59010
     Region          58..156
                     /region_name="WGR_PARP3_like"
                     /note="WGR domain of poly(ADP-ribose) polymerase 3 and
                     similar proteins; cd08002"
                     /db_xref="CDD:153429"
     Region          183..526
                     /region_name="parp_like"
                     /note="Poly(ADP-ribose) polymerase (parp) catalytic domain
                     catalyses the covalent attachment of ADP-ribose units from
                     NAD+ to itself and to a limited number of other DNA
                     binding proteins, which decreases their affinity for DNA.
                     Poly(ADP-ribose) polymerase is a...; cd01437"
                     /db_xref="CDD:238717"
     Site            order(183..245,249..274,279..301,312..319)
                     /site_type="active"
                     /note="parp regulatory domain [active]"
                     /db_xref="CDD:238717"
     Site            order(288,291..292,381..382,387,397..399,411..413,419,422,
                     508)
                     /site_type="active"
                     /note="Inhibitor contact residues [active]"
                     /db_xref="CDD:238717"
     Site            order(288,292,381..383,391,395..397,411,419,422,508)
                     /site_type="other"
                     /note="nad+ contact residues [chemical binding]"
                     /db_xref="CDD:238717"
     CDS             1..527
                     /gene="PARP3"
                     /coded_by="XM_041462898.1:287..1870"
                     /db_xref="GeneID:121351048"
ORIGIN      
        1 maskrqasss kqpdsreknp kveeedhtws stlatlktap kekppatidg lcplstapga
       61 rvyedynctl nqtnisannn kfyiiqlleh dsaysvwsrw grvgetgqsn lmpcasleaa
      121 kkdfekkfre ktknswatre nfvahpgkyt lievqpgagq eveaalrvda vdgdrvckqr
      181 vlpctldrat qelvslifss dmfrdamqtm nidvkkmplg klskqqiarg fealeeleaa
      241 lreqppqatr leelssrfyt ivphnfgrar pptinspdll rakkdmllvl adievaqslq
      301 aqkekeeeke vahpldqdya llccqlslld pasreyqliq tyvtqtghkl hilniwqvar
      361 dgederfkah dllehrrllw hgtnvavvaa ilksglrimp hsggrvgkgi yfasensksa
      421 cyvgctsknv gimflteval gkpyritcdd ptlcqppagy dsvlacgrte pdpaqdeevl
      481 ldgkkvlvcq gkpipmpayk dssfsqseyl iykesqcrir ylvqlrf
//
LOCUS       XP_041318841             511 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318841
VERSION     XP_041318841.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462907.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="protein mono-ADP-ribosyltransferase PARP3
                     isoform X2"
                     /calculated_mol_wt=57303
     Region          58..156
                     /region_name="WGR_PARP3_like"
                     /note="WGR domain of poly(ADP-ribose) polymerase 3 and
                     similar proteins; cd08002"
                     /db_xref="CDD:153429"
     Region          183..510
                     /region_name="parp_like"
                     /note="Poly(ADP-ribose) polymerase (parp) catalytic domain
                     catalyses the covalent attachment of ADP-ribose units from
                     NAD+ to itself and to a limited number of other DNA
                     binding proteins, which decreases their affinity for DNA.
                     Poly(ADP-ribose) polymerase is a...; cd01437"
                     /db_xref="CDD:238717"
     Site            order(183..245,249..274,279..301,312..319)
                     /site_type="active"
                     /note="parp regulatory domain [active]"
                     /db_xref="CDD:238717"
     CDS             1..511
                     /gene="PARP3"
                     /coded_by="XM_041462907.1:490..2025"
                     /db_xref="GeneID:121351048"
ORIGIN      
        1 maskrqasss kqpdsreknp kveeedhtws stlatlktap kekppatidg lcplstapga
       61 rvyedynctl nqtnisannn kfyiiqlleh dsaysvwsrw grvgetgqsn lmpcasleaa
      121 kkdfekkfre ktknswatre nfvahpgkyt lievqpgagq eveaalrvda vdgdrvckqr
      181 vlpctldrat qelvslifss dmfrdamqtm nidvkkmplg klskqqiarg fealeeleaa
      241 lreqppqatr leelssrfyt ivphnfgrar pptinspdll rakkdmllvl adievaqslq
      301 aqkekeeeke vahpldqdya llccqlslld pasreyqliq tyvtqtghkl hilniwqvar
      361 dgederfkah dllehrrllw hgtnvavvaa ilksglrimp hsggrvvgct sknvgimflt
      421 evalgkpyri tcddptlcqp pagydsvlac grtepdpaqd eevlldgkkv lvcqgkpipm
      481 paykdssfsq seyliykesq crirylvqlr f
//
LOCUS       XP_041318849             501 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318849
VERSION     XP_041318849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="protein mono-ADP-ribosyltransferase PARP3
                     isoform X3"
                     /calculated_mol_wt=55993
     Region          58..156
                     /region_name="WGR_PARP3_like"
                     /note="WGR domain of poly(ADP-ribose) polymerase 3 and
                     similar proteins; cd08002"
                     /db_xref="CDD:153429"
     Region          183..500
                     /region_name="parp_like"
                     /note="Poly(ADP-ribose) polymerase (parp) catalytic domain
                     catalyses the covalent attachment of ADP-ribose units from
                     NAD+ to itself and to a limited number of other DNA
                     binding proteins, which decreases their affinity for DNA.
                     Poly(ADP-ribose) polymerase is a...; cd01437"
                     /db_xref="CDD:238717"
     Site            order(183..245,249..274,279..301,312..319)
                     /site_type="active"
                     /note="parp regulatory domain [active]"
                     /db_xref="CDD:238717"
     Site            order(288,291..292,355..356,361,371..373,385..387,393,396,
                     482)
                     /site_type="active"
                     /note="Inhibitor contact residues [active]"
                     /db_xref="CDD:238717"
     Site            order(288,292,355..357,365,369..371,385,393,396,482)
                     /site_type="other"
                     /note="nad+ contact residues [chemical binding]"
                     /db_xref="CDD:238717"
     CDS             1..501
                     /gene="PARP3"
                     /coded_by="XM_041462915.1:490..1995"
                     /db_xref="GeneID:121351048"
ORIGIN      
        1 maskrqasss kqpdsreknp kveeedhtws stlatlktap kekppatidg lcplstapga
       61 rvyedynctl nqtnisannn kfyiiqlleh dsaysvwsrw grvgetgqsn lmpcasleaa
      121 kkdfekkfre ktknswatre nfvahpgkyt lievqpgagq eveaalrvda vdgdrvckqr
      181 vlpctldrat qelvslifss dmfrdamqtm nidvkkmplg klskqqiarg fealeeleaa
      241 lreqppqatr leelssrfyt ivphnfgrar pptinspdll rakkdmllvl adievaqslq
      301 aqkekeeeke vahpldqdya llccqlslld pasreyqder fkahdllehr rllwhgtnva
      361 vvaailksgl rimphsggrv gkgiyfasen sksacyvgct sknvgimflt evalgkpyri
      421 tcddptlcqp pagydsvlac grtepdpaqd eevlldgkkv lvcqgkpipm paykdssfsq
      481 seyliykesq crirylvqlr f
//
LOCUS       XP_041318861             515 aa            linear   VRT 06-MAY-2021
DEFINITION  2'-5'-oligoadenylate synthase 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041318861
VERSION     XP_041318861.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462927.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="2'-5'-oligoadenylate synthase 1-like"
                     /calculated_mol_wt=58467
     Region          37..215
                     /region_name="NT_2-5OAS_ClassI-CCAase"
                     /note="Nucleotidyltransferase (NT) domain of
                     2'5'-oligoadenylate (2-5A)synthetase (2-5OAS) and class I
                     CCA-adding enzyme; cd05400"
                     /db_xref="CDD:143390"
     Site            order(66..68,71,73..75,80,82,134..135,138,155,201,205,208)
                     /site_type="active"
                     /db_xref="CDD:143390"
     Site            order(67..68,80,82,135,201,205,208)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:143390"
     Site            order(80,82,155)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143390"
     Region          171..350
                     /region_name="OAS1_C"
                     /note="2'-5'-oligoadenylate synthetase 1, domain 2,
                     C-terminus; pfam10421"
                     /db_xref="CDD:463087"
     Region          353..427
                     /region_name="Ubl1_OASL"
                     /note="ubiquitin-like (Ubl) domain 1 found in
                     2'-5'-oligoadenylate synthase-like protein (OASL) and
                     similar proteins; cd01811"
                     /db_xref="CDD:340509"
     Region          434..507
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..515
                     /gene="LOC121351065"
                     /coded_by="XM_041462927.1:95..1642"
                     /db_xref="GeneID:121351065"
ORIGIN      
        1 mdvdlvastn glrsvttkel dgwiaktlqp staftmqvke tvwqiceflk rkcfednihv
       61 qktvkggsag kgtalknnsd advvlfltcl psyqdqknnr kdildsimmr lqdcreslqf
      121 dvhigepryk gpdstprsls ltlssretre sidvdilpay dalgqvtqda ppnpevyvsl
      181 lhacshpgef spcftelqkk fvkrcpaklk dllrlvkywy kemlnsqypn ahlppkyale
      241 lltiyaweeg tgsscnfdma qgfrtvlell grhrdiciyw ekyyslqhre igahvkgllc
      301 sprpvildpa dptgilgqdk nwdlmaqaaa sycrslpcla nvqpwgvqpa rpvtievrql
      361 sgttltqrvs pyttirelee vihqnwdisp yrqrlaqqep grnniilqdc dtlathgify
      421 nttlvllqte prqmdvlvkd dknrtttytv lptdtvrqlk eriqarqgps aneqrltyes
      481 keledqytla hynvrpmgti ymllrlrggt gpqlp
//
LOCUS       XP_041318872             511 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-coupled neutral amino acid transporter 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318872
VERSION     XP_041318872.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462938.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="sodium-coupled neutral amino acid transporter 3"
                     /calculated_mol_wt=56116
     Region          68..498
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..511
                     /gene="SLC38A3"
                     /coded_by="XM_041462938.1:190..1725"
                     /db_xref="GeneID:121351075"
ORIGIN      
        1 mdttdvplqa emvelvpngk htaalttstv pslagdrfee nqtgvaemee flphgaekkq
       61 thftdfegkt sfgmsvfnls naimgsgilg layamantgi ilflflltav allssysihl
      121 llkssgivgi rayeqlgyra fgtpgklaaa iaitlqniga mssylyivks evplviqtfl
      181 nleekttdwy mngnylvilv sitiilplal mkqlgylgya sgfslscmvf flisviykkf
      241 qipcplpeqe gnitgilnvt tvstsdyqng ytvlqapeqd tctpsfftln sqtaytipim
      301 afafvchpev lpiytelkdp skkkmqcisn isimvmylmy flaalfgylt fydrvesell
      361 htynkvdpfd vlilcvrvav ltavtltvpi vlfpvrraiq qmlfqgkdfs wirhiaiavi
      421 lltfinllvi fapsilgifg ligatsapcl ififpaifyi rimpkdkepl rstpkilaac
      481 fallgvvfmi mslsfiiidw atgggksggs h
//
LOCUS       XP_041318885             446 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon-related developmental regulator 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318885
VERSION     XP_041318885.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462951.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="interferon-related developmental regulator 2
                     isoform X1"
                     /calculated_mol_wt=48507
     Region          64..345
                     /region_name="IFRD"
                     /note="Interferon-related developmental regulator (IFRD);
                     pfam05004"
                     /db_xref="CDD:461515"
     Region          390..443
                     /region_name="IFRD_C"
                     /note="Interferon-related protein conserved region;
                     pfam04836"
                     /db_xref="CDD:461452"
     CDS             1..446
                     /gene="IFRD2"
                     /coded_by="XM_041462951.1:32..1372"
                     /db_xref="GeneID:121351086"
ORIGIN      
        1 mkreepndrn shlgtrpgsg rarrmggggg tgsarasspg seeeagsevl shcssasesa
       61 spadegpgse aanepgqeee vedrlkehmd tlldksakar qaalqglrla lssktlpefl
      121 lerrltltds lekclkkgkg eeqalagtvl tllclqmgsg pegeevfrsl kpllvsvltd
      181 staspsarqs catalgmccy iaaadledlv sclsclegif sppstgeggs apaqhgplhc
      241 salqswslll ticppshlrs ildnrwlqlp plltsssval rilagetial lfelaqdlee
      301 dlcqqdtefl ctqlkvlate snkyraktdr rrqrsifrdi lrfiesgeyq eetirfglec
      361 myldswarqr tyqafkevlg sgihhhlqnn ellreifglg pplvldaaal kaskvsrfek
      421 hlynsaafka rtkarsrvrd kradvl
//
LOCUS       XP_041318893             430 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon-related developmental regulator 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318893
VERSION     XP_041318893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462959.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..430
                     /product="interferon-related developmental regulator 2
                     isoform X2"
                     /calculated_mol_wt=46611
     Region          64..329
                     /region_name="IFRD"
                     /note="Interferon-related developmental regulator (IFRD);
                     pfam05004"
                     /db_xref="CDD:461515"
     Region          374..427
                     /region_name="IFRD_C"
                     /note="Interferon-related protein conserved region;
                     pfam04836"
                     /db_xref="CDD:461452"
     CDS             1..430
                     /gene="IFRD2"
                     /coded_by="XM_041462959.1:32..1324"
                     /db_xref="GeneID:121351086"
ORIGIN      
        1 mkreepndrn shlgtrpgsg rarrmggggg tgsarasspg seeeagsevl shcssasesa
       61 spadegpgse aanepgqeee vedrlkehmd tlldksakar qaalqglrla lssktlpefl
      121 lerrltltds lekclkkgkg eeqalagtvl tllclqmgsg pegeevfrsl kpllvsvltd
      181 staspsarqs catalgmccy iaaadledlv sclsclegif sppstgeggs apaqhgplhc
      241 salqswslll ticppshlrs ildnrwlqlp plltsssval rilagetial lfelaqdlev
      301 latesnkyra ktdrrrqrsi frdilrfies geyqeetirf glecmyldsw arqrtyqafk
      361 evlgsgihhh lqnnellrei fglgpplvld aaalkaskvs rfekhlynsa afkartkars
      421 rvrdkradvl
//
LOCUS       XP_041318902             429 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon-related developmental regulator 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318902
VERSION     XP_041318902.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462968.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..429
                     /product="interferon-related developmental regulator 2
                     isoform X3"
                     /calculated_mol_wt=46759
     Region          47..328
                     /region_name="IFRD"
                     /note="Interferon-related developmental regulator (IFRD);
                     pfam05004"
                     /db_xref="CDD:461515"
     Region          373..426
                     /region_name="IFRD_C"
                     /note="Interferon-related protein conserved region;
                     pfam04836"
                     /db_xref="CDD:461452"
     CDS             1..429
                     /gene="IFRD2"
                     /coded_by="XM_041462968.1:16..1305"
                     /db_xref="GeneID:121351086"
ORIGIN      
        1 mtethtwelg qggtgsaras spgseeeags evlshcssas esaspadegp gseaanepgq
       61 eeevedrlke hmdtlldksa karqaalqgl rlalssktlp efllerrltl tdslekclkk
      121 gkgeeqalag tvltllclqm gsgpegeevf rslkpllvsv ltdstaspsa rqscatalgm
      181 ccyiaaadle dlvsclscle gifsppstge ggsapaqhgp lhcsalqsws lllticppsh
      241 lrsildnrwl qlpplltsss valrilaget iallfelaqd leedlcqqdt eflctqlkvl
      301 atesnkyrak tdrrrqrsif rdilrfiesg eyqeetirfg lecmyldswa rqrtyqafke
      361 vlgsgihhhl qnnellreif glgpplvlda aalkaskvsr fekhlynsaa fkartkarsr
      421 vrdkradvl
//
LOCUS       XP_041318911             427 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon-related developmental regulator 2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041318911
VERSION     XP_041318911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462977.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..427
                     /product="interferon-related developmental regulator 2
                     isoform X4"
                     /calculated_mol_wt=46626
     Region          45..326
                     /region_name="IFRD"
                     /note="Interferon-related developmental regulator (IFRD);
                     pfam05004"
                     /db_xref="CDD:461515"
     Region          371..424
                     /region_name="IFRD_C"
                     /note="Interferon-related protein conserved region;
                     pfam04836"
                     /db_xref="CDD:461452"
     CDS             1..427
                     /gene="IFRD2"
                     /coded_by="XM_041462977.1:25..1308"
                     /db_xref="GeneID:121351086"
ORIGIN      
        1 mprsrraarr gtgsarassp gseeeagsev lshcssases aspadegpgs eaanepgqee
       61 evedrlkehm dtlldksaka rqaalqglrl alssktlpef llerrltltd slekclkkgk
      121 geeqalagtv ltllclqmgs gpegeevfrs lkpllvsvlt dstaspsarq scatalgmcc
      181 yiaaadledl vsclsclegi fsppstgegg sapaqhgplh csalqswsll lticppshlr
      241 sildnrwlql pplltsssva lrilagetia llfelaqdle edlcqqdtef lctqlkvlat
      301 esnkyraktd rrrqrsifrd ilrfiesgey qeetirfgle cmyldswarq rtyqafkevl
      361 gsgihhhlqn nellreifgl gpplvldaaa lkaskvsrfe khlynsaafk artkarsrvr
      421 dkradvl
//
LOCUS       XP_041318922             446 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronidase-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041318922
VERSION     XP_041318922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041462988.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="hyaluronidase-3"
                     /calculated_mol_wt=49387
     Region          25..354
                     /region_name="Glyco_hydro_56"
                     /note="Hyaluronidase; pfam01630"
                     /db_xref="CDD:460272"
     CDS             1..446
                     /gene="HYAL3"
                     /coded_by="XM_041462988.1:1..1341"
                     /db_xref="GeneID:121351109"
ORIGIN      
        1 mvlvlalwac lalgtarees papaplaggq pfavvwnvps grcqhrfgig lplsdygive
       61 nqgghfagqn itifyknkfg lypylsqhgv phngglpqrv slhahinrva edihlllrpa
      121 fhglavvdwe ewrplwaqnw gakkmyrtas eqwvrdqhgv lpewqqlrla qlefeqaaqa
      181 lmeetllvgr alrpgglwgf yrfpdclnsn wakeanytgq cqpaevqrnn rlgwlwaass
      241 alypsiylpl alppalrrry vhhrlrealr vaafgahgll pviaysrlsf rrssrflpla
      301 dlvhtigesa algaaglvlw gdmsyshsae scanlrhylv stlgpyvanv taaarecsyg
      361 qchghgrcvr rqphdlgsll hlgpgaspwa afrchcyrgw agegcaqrvw lspatscqvp
      421 dhahslyghk dvtssdtclp qgtwgw
//
LOCUS       XP_041318935             426 aa            linear   VRT 06-MAY-2021
DEFINITION  aminoacylase-1-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041318935
VERSION     XP_041318935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="aminoacylase-1-like isoform X1"
                     /calculated_mol_wt=47366
     Region          27..417
                     /region_name="M20_AcylaseI_like"
                     /note="M20 Aminoacylase-I like subfamily; cd05646"
                     /db_xref="CDD:349898"
     CDS             1..426
                     /gene="LOC121351117"
                     /coded_by="XM_041463001.1:147..1427"
                     /db_xref="GeneID:121351117"
ORIGIN      
        1 mlfpqsfaal vpdmapgkpg kstgasenps vtlfreylri dtvhpkpdyd aavqflervg
       61 telglacqkv evcqgrvvli ltwqgtnprl rsillnshtd vvpvfeehwt yppfeavkds
      121 qgniyargaq dmkcvsiqyl eairrlkteg ksfartihlt fvpdeevggh kgmemfvqrp
      181 efkalnvgfa mdeglaspsd tfsvfygers pwwikvkcvg spghgsrfis ntaaekmhkv
      241 insflafres ekqrlksdss ltlgdvtsln mtmleggvsf nvvpsemaas fdiripptvd
      301 lkafekqvat wcrdagegvt cefhqkcmdq hitsteesdp wwkafsgvcr dmklqlklei
      361 fsaatdsryi raaghpaigf spmnrtpvll hdhneflneq vflrgieiya rlltalasvp
      421 plpaeg
//
LOCUS       XP_041318943             413 aa            linear   VRT 06-MAY-2021
DEFINITION  aminoacylase-1-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318943
VERSION     XP_041318943.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463009.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="aminoacylase-1-like isoform X2"
                     /calculated_mol_wt=45949
     Region          14..404
                     /region_name="M20_AcylaseI_like"
                     /note="M20 Aminoacylase-I like subfamily; cd05646"
                     /db_xref="CDD:349898"
     CDS             1..413
                     /gene="LOC121351117"
                     /coded_by="XM_041463009.1:176..1417"
                     /db_xref="GeneID:121351117"
ORIGIN      
        1 mapgkpgkst gasenpsvtl freylridtv hpkpdydaav qflervgtel glacqkvevc
       61 qgrvvliltw qgtnprlrsi llnshtdvvp vfeehwtypp feavkdsqgn iyargaqdmk
      121 cvsiqyleai rrlktegksf artihltfvp deevgghkgm emfvqrpefk alnvgfamde
      181 glaspsdtfs vfygerspww ikvkcvgspg hgsrfisnta aekmhkvins flafresekq
      241 rlksdssltl gdvtslnmtm leggvsfnvv psemaasfdi ripptvdlka fekqvatwcr
      301 dagegvtcef hqkcmdqhit steesdpwwk afsgvcrdmk lqlkleifsa atdsryiraa
      361 ghpaigfspm nrtpvllhdh neflneqvfl rgieiyarll talasvpplp aeg
//
LOCUS       XP_041318951             413 aa            linear   VRT 06-MAY-2021
DEFINITION  aminoacylase-1-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318951
VERSION     XP_041318951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="aminoacylase-1-like isoform X2"
                     /calculated_mol_wt=45949
     Region          14..404
                     /region_name="M20_AcylaseI_like"
                     /note="M20 Aminoacylase-I like subfamily; cd05646"
                     /db_xref="CDD:349898"
     CDS             1..413
                     /gene="LOC121351117"
                     /coded_by="XM_041463017.1:106..1347"
                     /db_xref="GeneID:121351117"
ORIGIN      
        1 mapgkpgkst gasenpsvtl freylridtv hpkpdydaav qflervgtel glacqkvevc
       61 qgrvvliltw qgtnprlrsi llnshtdvvp vfeehwtypp feavkdsqgn iyargaqdmk
      121 cvsiqyleai rrlktegksf artihltfvp deevgghkgm emfvqrpefk alnvgfamde
      181 glaspsdtfs vfygerspww ikvkcvgspg hgsrfisnta aekmhkvins flafresekq
      241 rlksdssltl gdvtslnmtm leggvsfnvv psemaasfdi ripptvdlka fekqvatwcr
      301 dagegvtcef hqkcmdqhit steesdpwwk afsgvcrdmk lqlkleifsa atdsryiraa
      361 ghpaigfspm nrtpvllhdh neflneqvfl rgieiyarll talasvpplp aeg
//
LOCUS       XP_041318960             413 aa            linear   VRT 06-MAY-2021
DEFINITION  aminoacylase-1-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318960
VERSION     XP_041318960.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463026.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="aminoacylase-1-like isoform X2"
                     /calculated_mol_wt=45949
     Region          14..404
                     /region_name="M20_AcylaseI_like"
                     /note="M20 Aminoacylase-I like subfamily; cd05646"
                     /db_xref="CDD:349898"
     CDS             1..413
                     /gene="LOC121351117"
                     /coded_by="XM_041463026.1:66..1307"
                     /db_xref="GeneID:121351117"
ORIGIN      
        1 mapgkpgkst gasenpsvtl freylridtv hpkpdydaav qflervgtel glacqkvevc
       61 qgrvvliltw qgtnprlrsi llnshtdvvp vfeehwtypp feavkdsqgn iyargaqdmk
      121 cvsiqyleai rrlktegksf artihltfvp deevgghkgm emfvqrpefk alnvgfamde
      181 glaspsdtfs vfygerspww ikvkcvgspg hgsrfisnta aekmhkvins flafresekq
      241 rlksdssltl gdvtslnmtm leggvsfnvv psemaasfdi ripptvdlka fekqvatwcr
      301 dagegvtcef hqkcmdqhit steesdpwwk afsgvcrdmk lqlkleifsa atdsryiraa
      361 ghpaigfspm nrtpvllhdh neflneqvfl rgieiyarll talasvpplp aeg
//
LOCUS       XP_041318969             413 aa            linear   VRT 06-MAY-2021
DEFINITION  aminoacylase-1-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318969
VERSION     XP_041318969.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463035.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="aminoacylase-1-like isoform X2"
                     /calculated_mol_wt=45949
     Region          14..404
                     /region_name="M20_AcylaseI_like"
                     /note="M20 Aminoacylase-I like subfamily; cd05646"
                     /db_xref="CDD:349898"
     CDS             1..413
                     /gene="LOC121351117"
                     /coded_by="XM_041463035.1:74..1315"
                     /db_xref="GeneID:121351117"
ORIGIN      
        1 mapgkpgkst gasenpsvtl freylridtv hpkpdydaav qflervgtel glacqkvevc
       61 qgrvvliltw qgtnprlrsi llnshtdvvp vfeehwtypp feavkdsqgn iyargaqdmk
      121 cvsiqyleai rrlktegksf artihltfvp deevgghkgm emfvqrpefk alnvgfamde
      181 glaspsdtfs vfygerspww ikvkcvgspg hgsrfisnta aekmhkvins flafresekq
      241 rlksdssltl gdvtslnmtm leggvsfnvv psemaasfdi ripptvdlka fekqvatwcr
      301 dagegvtcef hqkcmdqhit steesdpwwk afsgvcrdmk lqlkleifsa atdsryiraa
      361 ghpaigfspm nrtpvllhdh neflneqvfl rgieiyarll talasvpplp aeg
//
LOCUS       XP_041318978             413 aa            linear   VRT 06-MAY-2021
DEFINITION  aminoacylase-1-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041318978
VERSION     XP_041318978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="aminoacylase-1-like isoform X2"
                     /calculated_mol_wt=45949
     Region          14..404
                     /region_name="M20_AcylaseI_like"
                     /note="M20 Aminoacylase-I like subfamily; cd05646"
                     /db_xref="CDD:349898"
     CDS             1..413
                     /gene="LOC121351117"
                     /coded_by="XM_041463044.1:150..1391"
                     /db_xref="GeneID:121351117"
ORIGIN      
        1 mapgkpgkst gasenpsvtl freylridtv hpkpdydaav qflervgtel glacqkvevc
       61 qgrvvliltw qgtnprlrsi llnshtdvvp vfeehwtypp feavkdsqgn iyargaqdmk
      121 cvsiqyleai rrlktegksf artihltfvp deevgghkgm emfvqrpefk alnvgfamde
      181 glaspsdtfs vfygerspww ikvkcvgspg hgsrfisnta aekmhkvins flafresekq
      241 rlksdssltl gdvtslnmtm leggvsfnvv psemaasfdi ripptvdlka fekqvatwcr
      301 dagegvtcef hqkcmdqhit steesdpwwk afsgvcrdmk lqlkleifsa atdsryiraa
      361 ghpaigfspm nrtpvllhdh neflneqvfl rgieiyarll talasvpplp aeg
//
LOCUS       XP_041318992             420 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(rC)-binding protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041318992
VERSION     XP_041318992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="poly(rC)-binding protein 4"
                     /calculated_mol_wt=42945
     Region          22..91
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          105..176
                     /region_name="KH-I_PCBP4_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 4 (PCBP4) and similar
                     proteins; cd22520"
                     /db_xref="CDD:411948"
     Site            order(113,118..119,121..125,128,132,140..143,148,152)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411948"
     Region          249..316
                     /region_name="KH-I_PCBP4_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 4 (PCBP4) and similar
                     proteins; cd22523"
                     /db_xref="CDD:411951"
     Site            order(259..263,265..269,271..273,276,284..285,287,295)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411951"
     CDS             1..420
                     /gene="PCBP4"
                     /coded_by="XM_041463058.1:187..1449"
                     /db_xref="GeneID:121351147"
ORIGIN      
        1 maspdgasgv ggspeetels itltlrmlmh gkeigsiigk kgetvkrire qstaritise
       61 gscperitti tgstdavfra vsmiafklee dlgaggdgvs agrapvtlrl vipasqcgsl
      121 igkagakire irestgaqvq vagdllpnst eravtvsgvp dtiiqcvrqi cavilesppk
      181 gatipyhpgl slgtillsan qgfsmqgqys gvspaevtkl qqlsghalpf aplghaptmv
      241 pgldassqss sqeflvpndl igciigrhgs kiseirqmsg ahikignqte gsserhvtit
      301 gtpvsitlaq ylitacleta kstsqvppgp gsmdlgmgfs qplapgsgaa lpavapappa
      361 llgtpyaisl snfiglkpvs flalspssva gpnggtttyt tkisaangtk kadrqkfspy
//
LOCUS       XP_041319003             409 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041319003
VERSION     XP_041319003.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463069.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="probable G-protein coupled receptor"
                     /calculated_mol_wt=45105
     Region          28..336
                     /region_name="7tmA_GPR61_GPR62-like"
                     /note="G protein-coupled receptors 61 and 62, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15220"
                     /db_xref="CDD:410633"
     Region          28..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410633"
     Region          59..84
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410633"
     Site            order(81,84..85,99..104,106..107,110,155,157..161,187,
                     190..192,194..196,198..199,284,287..288,290..291,294,
                     303..304,306..308,311,314..315)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:410633"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410633"
     Region          141..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410633"
     Region          187..216
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410633"
     Region          264..294
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410633"
     Region          304..329
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410633"
     CDS             1..409
                     /gene="LOC121351156"
                     /coded_by="XM_041463069.1:1..1230"
                     /db_xref="GeneID:121351156"
ORIGIN      
        1 mpswtgsntt dslelltipv hsigqevvgl fcmilltlta lvanivvmvi ilktplfrkf
       61 ifvchlcvvn llsaiflmpl giisssscfn wviysiaeck aviflnicfi sasilticii
      121 sveryyyivh plryevkmti rlavagvvfi wvksvlitvl alvawphgng atsasrctvy
      181 wspgahkkvf vilfsitcfi lptiiilavy ssiyrvarta slqqapvpaq avaprhrcds
      241 iasqvtilta rilmlprlip drllgsnkai ltlvlivgqf lccwlpffaf hlhssvtvgt
      301 vggghgemvv twiayssfav npffygllnr qireelarlr rsclnhplgq elclsiseas
      361 vqenflqflq ratctletht scispsprnr ldqtttgfpt pgqvpeens
//
LOCUS       XP_041319016             358 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: N-alpha-acetyltransferase 80 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319016
VERSION     XP_041319016.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463082.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="LOW QUALITY PROTEIN: N-alpha-acetyltransferase
                     80"
                     /calculated_mol_wt=38036
     Region          135..262
                     /region_name="yhbS"
                     /note="Predicted N-acetyltransferase YhbS [General
                     function prediction only]; COG3153"
                     /db_xref="CDD:442387"
     CDS             1..358
                     /gene="NAA80"
                     /coded_by="XM_041463082.1:1..1077"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121351162"
ORIGIN      
        1 messrtvyrs lgrrggredg hpqnslgqrs prrerscsta plpsgaccpw awrpcggpgr
       61 pgxgvppscp gpagcpvrgd lgaagavrax calrpaegag gpgrpeevta aagpkhvrrm
      121 gsvseelslv plhqrpelle acakllgeew gksrasrlht lqrssdafpt cllllrsrgp
      181 setpaaregp celvghvrls rvvsrphdlf vesvvvaral rgqgygrrlm egteqwarar
      241 gfrclhltth dkqhfyahlg fvlgepvqsv aflspaisse vlrlfsapsg aataittrpw
      301 vpaapppplp pltvpppppp ptviwargvl aesseqslle srhrdakglp ifwmkkdi
//
LOCUS       XP_041319027             355 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein G(i) subunit alpha-2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319027
VERSION     XP_041319027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="guanine nucleotide-binding protein G(i) subunit
                     alpha-2"
                     /calculated_mol_wt=40415
     Region          34..349
                     /region_name="G-alpha"
                     /note="Alpha subunit of G proteins (guanine nucleotide
                     binding); cd00066"
                     /db_xref="CDD:206639"
     Site            order(40,45..47,182,201,204,270..271,273,326..327)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206639"
     Site            40..47
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206639"
     Site            order(41..43,71,75,79,82,85..86,104,107,150,179,204,212,
                     216)
                     /site_type="active"
                     /note="GoLoco binding site [active]"
                     /db_xref="CDD:206639"
     Site            177..185
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206639"
     Site            182
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206639"
     Site            order(183,185,187,198,200,204..206,208,211..212,214..217)
                     /site_type="other"
                     /note="beta - gamma complex interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            order(185,210,213..214,217)
                     /site_type="other"
                     /note="adenylyl cyclase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            201..204
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206639"
     Site            202..218
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206639"
     Site            270..273
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206639"
     Site            order(318..329,331..334)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:206639"
     Site            326..328
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206639"
     CDS             1..355
                     /gene="GNAI2"
                     /coded_by="XM_041463093.1:65..1132"
                     /db_xref="GeneID:121351171"
ORIGIN      
        1 mgctvsaedk aaaersrmid knlredgeka arevkllllg agesgkstiv kqmkiihedg
       61 yseeecrqyk avvysntiqs imaiikamgn lqidfgdssr addarqlfal sstaeeqgim
      121 pedlanvirr lwadngvqac fnrsreyqln dsaayylndl eriaradyip tqqdvlrtrv
      181 kttgivethf tfkdlhfkmf dvggqrserk kwihcfegvt aiifcvalsa ydlvlaedee
      241 mnrmhesmkl fdsicnnkwf tdtsiilfln kkdlfeekiv hsslticfpe ytgankydea
      301 asyiqskfed lnkrkdtkei ythftcatdt knvqfvfdav tdviiknnlk dcglf
//
LOCUS       XP_041319040             350 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein G(t) subunit alpha-1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319040
VERSION     XP_041319040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="guanine nucleotide-binding protein G(t) subunit
                     alpha-1"
                     /calculated_mol_wt=39848
     Region          30..344
                     /region_name="G-alpha"
                     /note="Alpha subunit of G proteins (guanine nucleotide
                     binding); cd00066"
                     /db_xref="CDD:206639"
     Site            order(36,41..43,177,196,199,265..266,268,321..322)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206639"
     Site            36..43
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206639"
     Site            order(37..39,67,71,75,78,81..82,100,103,145,174,199,207,
                     211)
                     /site_type="active"
                     /note="GoLoco binding site [active]"
                     /db_xref="CDD:206639"
     Site            172..180
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206639"
     Site            177
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206639"
     Site            order(178,180,182,193,195,199..201,203,206..207,209..212)
                     /site_type="other"
                     /note="beta - gamma complex interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            order(180,205,208..209,212)
                     /site_type="other"
                     /note="adenylyl cyclase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            196..199
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206639"
     Site            197..213
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206639"
     Site            265..268
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206639"
     Site            order(313..324,326..329)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:206639"
     Site            321..323
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206639"
     CDS             1..350
                     /gene="GNAT1"
                     /coded_by="XM_041463106.1:108..1160"
                     /db_xref="GeneID:121351178"
ORIGIN      
        1 mgagasaeek hsrelekklk edaekdartv kllllgages gkstivkqmk iihqdgysle
       61 eclefiaiiy sntlqsmlai vramttlniq ygdtarqdda rkllhlsdti eegtmpkems
      121 eiigrlwkds giqacfdras eyqlndsagy ylsdlerlvt pgyvpteqdv lrsrvkttgi
      181 ietqfsfkdl nfrmfdvggq rserkkwihc fegvtciifi aalsaydmvl veddevnrmh
      241 eslhlfnsic nhryfattsi vlflnkkdvf lekikkahls icfpdydgpn tyddagnyik
      301 lqflelnmrr dvkeiyshmt catdtenvkf vfdavtdiii kenlkdcglf
//
LOCUS       XP_041319051             249 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ABHD14A [Pyrgilauda ruficollis].
ACCESSION   XP_041319051
VERSION     XP_041319051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="protein ABHD14A"
                     /calculated_mol_wt=26854
     Region          58..248
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..249
                     /gene="ABHD14A"
                     /coded_by="XM_041463117.1:142..891"
                     /db_xref="GeneID:121351186"
ORIGIN      
        1 mllarsrlgl lllgalltfl lylllpaarr srpdegkwgw raangtvrtg maaeeppvfy
       61 revpaaavgs grpdvlflhg qaftsmtwea lgtlallage gyravaidlp gygdsppvem
      121 altaqgrkaf ldrvlqelgm qrpvlispsm sgrfalpfvl ahgdrlagfv piapvgtkdy
      181 taeqyrgvqt ptlilygdhd tglapqalqn lqhlpnhrva vlsgaghacy ldkpedfhra
      241 llgflhqlk
//
LOCUS       XP_041319063             210 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ABHD14B [Pyrgilauda ruficollis].
ACCESSION   XP_041319063
VERSION     XP_041319063.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463129.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="protein ABHD14B"
                     /calculated_mol_wt=22611
     Region          1..209
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..210
                     /gene="ABHD14B"
                     /coded_by="XM_041463129.1:433..1065"
                     /db_xref="GeneID:121351196"
ORIGIN      
        1 matprvtest vtvqgqtlfy rqadpaqavp kltvlllhgi rfssetwlqv gtlatlaeng
       61 yravaidlpg lgrskdavap apvgqpapaa flkavseald lgpavvisps lsgmyslpfl
      121 lehsqlfkay vpvapictek ftaeqyaqik tptlivygdq daelgqtsln nlrhlpehqv
      181 lmlqgaghac yldkpnewhr gllaflqqlk
//
LOCUS       XP_041319071             210 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ABHD14B [Pyrgilauda ruficollis].
ACCESSION   XP_041319071
VERSION     XP_041319071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="protein ABHD14B"
                     /calculated_mol_wt=22611
     Region          1..209
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..210
                     /gene="ABHD14B"
                     /coded_by="XM_041463137.1:639..1271"
                     /db_xref="GeneID:121351196"
ORIGIN      
        1 matprvtest vtvqgqtlfy rqadpaqavp kltvlllhgi rfssetwlqv gtlatlaeng
       61 yravaidlpg lgrskdavap apvgqpapaa flkavseald lgpavvisps lsgmyslpfl
      121 lehsqlfkay vpvapictek ftaeqyaqik tptlivygdq daelgqtsln nlrhlpehqv
      181 lmlqgaghac yldkpnewhr gllaflqqlk
//
LOCUS       XP_041319079             210 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ABHD14B [Pyrgilauda ruficollis].
ACCESSION   XP_041319079
VERSION     XP_041319079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463145.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="protein ABHD14B"
                     /calculated_mol_wt=22611
     Region          1..209
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..210
                     /gene="ABHD14B"
                     /coded_by="XM_041463145.1:418..1050"
                     /db_xref="GeneID:121351196"
ORIGIN      
        1 matprvtest vtvqgqtlfy rqadpaqavp kltvlllhgi rfssetwlqv gtlatlaeng
       61 yravaidlpg lgrskdavap apvgqpapaa flkavseald lgpavvisps lsgmyslpfl
      121 lehsqlfkay vpvapictek ftaeqyaqik tptlivygdq daelgqtsln nlrhlpehqv
      181 lmlqgaghac yldkpnewhr gllaflqqlk
//
LOCUS       XP_041319093             170 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich single-pass membrane protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319093
VERSION     XP_041319093.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463159.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..170
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..170
                     /product="leucine-rich single-pass membrane protein 2
                     isoform X1"
                     /calculated_mol_wt=17523
     Region          <120..166
                     /region_name="DUF4714"
                     /note="Domain of unknown function (DUF4714); pfam15833"
                     /db_xref="CDD:464901"
     CDS             1..170
                     /gene="LSMEM2"
                     /coded_by="XM_041463159.1:64..576"
                     /db_xref="GeneID:121351210"
ORIGIN      
        1 mpreaaeads mgraegaapa epgdpdsses gaislrpves isdlywasgg hkgtegngpa
       61 pssslhrppp rpvspvpppl lptlrpvppa slcpclgpgh plllallall alsslvlatl
      121 aiylsvlqsq svralaqwle sqedavhqlr aasrqlwarl nasaqpgghr
//
LOCUS       XP_041319102             169 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich single-pass membrane protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319102
VERSION     XP_041319102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..169
                     /product="leucine-rich single-pass membrane protein 2
                     isoform X2"
                     /calculated_mol_wt=17452
     Region          <119..165
                     /region_name="DUF4714"
                     /note="Domain of unknown function (DUF4714); pfam15833"
                     /db_xref="CDD:464901"
     CDS             1..169
                     /gene="LSMEM2"
                     /coded_by="XM_041463168.1:64..573"
                     /db_xref="GeneID:121351210"
ORIGIN      
        1 mpreaaedsm graegaapae pgdpdssesg aislrpvesi sdlywasggh kgtegngpap
       61 ssslhrpppr pvspvpppll ptlrpvppas lcpclgpghp lllallalla lsslvlatla
      121 iylsvlqsqs vralaqwles qedavhqlra asrqlwarln asaqpgghr
//
LOCUS       XP_041319115             892 aa            linear   VRT 06-MAY-2021
DEFINITION  inter-alpha-trypsin inhibitor heavy chain H3-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041319115
VERSION     XP_041319115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..892
                     /product="inter-alpha-trypsin inhibitor heavy chain
                     H3-like isoform X1"
                     /calculated_mol_wt=99768
     Region          37..158
                     /region_name="VIT"
                     /note="Vault protein Inter-alpha-Trypsin domain;
                     smart00609"
                     /db_xref="CDD:197803"
     Region          280..461
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(289,357,394)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          685..872
                     /region_name="ITI_HC_C"
                     /note="Inter-alpha-trypsin inhibitor heavy chain
                     C-terminus; pfam06668"
                     /db_xref="CDD:461981"
     CDS             1..892
                     /gene="LOC121351221"
                     /coded_by="XM_041463181.1:1..2679"
                     /db_xref="GeneID:121351221"
ORIGIN      
        1 mknkrllcil vlipafassd fllthvrnik krnadndlvv ngmeiysmki dskvtsrfah
       61 nvitsravnr gnvskevffd velpktafit nfsmtidgvt ypgiikekea akkqyekavs
      121 rgqtaglvka sgrktekftv svnikaaskv tfeltyeell krqfgkyeml ikvkpkqlvk
      181 dfeievdife pqgiteleae gtfitnelqn tikktfsgkk ghisfkptld qqracascse
      241 svldgdftvr ydvkrttpdn lqivngyfvh ffaptnlpkl skniifvldt sgsmsgreie
      301 qtkeallkil ddvkeddffn filfdseist wketlikatp enldearkfv rqisaqgltn
      361 lhgglmrgid ilntaheenl vpkrsasiii mltdgqpnvg isntqeieka vkkaiggryt
      421 lynlgfgsgv dygflermal enkglarriy pdsdaalqlq gfydevsnpm lidvelnype
      481 neisdlttns fkhfydgsei vvagrfvdsn qnhlsvdvrg egahdalsyt tqqdaeqtaq
      541 afqeqqyifg eyierlwayl tieqllekri tatgeekenl taqalalslm ykfvtpltsm
      601 vvtkpeenen eegiadkpte aeagmftgpl vasplyhtya spptwytsvd gdphfiisvp
      661 qkkdaicfni nenpgmilnl isdpvtgitv ngeligdkra nsdakiqnsy fgklgiankh
      721 ldvkltvtpe mitiqngdek tgftwldsvt lqqagltlii nrkknlvlsm gsgasfvvvl
      781 hqvwkkhplh qdflglytlk sdklseqthg llgqffrpid ftileihpgs dpkkpdatmi
      841 vknneltvtr gwqkdyrrdp thgvdipcwf vhdngaglid gvhtdyivss lf
//
LOCUS       XP_041319124             894 aa            linear   VRT 06-MAY-2021
DEFINITION  inter-alpha-trypsin inhibitor heavy chain H3-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041319124
VERSION     XP_041319124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..894
                     /product="inter-alpha-trypsin inhibitor heavy chain
                     H3-like isoform X2"
                     /calculated_mol_wt=100214
     Region          37..158
                     /region_name="VIT"
                     /note="Vault protein Inter-alpha-Trypsin domain;
                     smart00609"
                     /db_xref="CDD:197803"
     Region          280..461
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(289,357,394)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          687..874
                     /region_name="ITI_HC_C"
                     /note="Inter-alpha-trypsin inhibitor heavy chain
                     C-terminus; pfam06668"
                     /db_xref="CDD:461981"
     CDS             1..894
                     /gene="LOC121351221"
                     /coded_by="XM_041463190.1:1..2685"
                     /db_xref="GeneID:121351221"
ORIGIN      
        1 mknkrllcil vlipafassd fllthvrnik krnadndlvv ngmeiysmki dskvtsrfah
       61 nvitsravnr gnvskevffd velpktafit nfsmtidgvt ypgiikekea akkqyekavs
      121 rgqtaglvka sgrktekftv svnikaaskv tfeltyeell krqfgkyeml ikvkpkqlvk
      181 dfeievdife pqgiteleae gtfitnelqn tikktfsgkk ghisfkptld qqracascse
      241 svldgdftvr ydvkrttpdn lqivngyfvh ffaptnlpkl skniifvldt sgsmsgreie
      301 qtkeallkil ddvkeddffn filfdseist wketlikatp enldearkfv rqisaqgltn
      361 lhgglmrgid ilntaheenl vpkrsasiii mltdgqpnvg isntqeieka vkkaiggryt
      421 lynlgfgsgv dygflermal enkglarriy pdsdaalqlq gfydevsnpm lidvelnype
      481 neisdlttns fkhfydgsei vvagrfvdsn qnhlsvdvrg egahdalsyt tqqdaeqtaq
      541 afqeqqyifg eyierlwayl tieqllekri tatgeekenl taqalalslm ykfvtpltsm
      601 vvtkpeenen eegiadkpte erarrsyica gkqasplyht yaspptwyts vdgdphfiis
      661 vpqkkdaicf ninenpgmil nlisdpvtgi tvngeligdk ransdakiqn syfgklgian
      721 khldvkltvt pemitiqngd ektgftwlds vtlqqagltl iinrkknlvl smgsgasfvv
      781 vlhqvwkkhp lhqdflglyt lksdklseqt hgllgqffrp idftileihp gsdpkkpdat
      841 mivknneltv trgwqkdyrr dpthgvdipc wfvhdngagl idgvhtdyiv sslf
//
LOCUS       XP_041319138             288 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETMAR [Pyrgilauda ruficollis].
ACCESSION   XP_041319138
VERSION     XP_041319138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463204.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="histone-lysine N-methyltransferase SETMAR"
                     /calculated_mol_wt=31362
     Region          23..279
                     /region_name="SET_SETMAR"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain and mariner transposase fusion protein
                     (SETMAR) and similar proteins; cd10544"
                     /db_xref="CDD:380942"
     Site            order(123..125,164..166,194..198,236,262..265,274,276)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380942"
     Site            order(123..125,142,149,152..153,155,165..169,172,183,
                     194..198,206,208,218,234,236)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380942"
     Site            order(167..169,183,206,218,236)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:380942"
     Site            order(200,263,265,270)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380942"
     CDS             1..288
                     /gene="LOC121351228"
                     /coded_by="XM_041463204.1:13..879"
                     /db_xref="GeneID:121351228"
ORIGIN      
        1 madlsggsea vavalwppge appafqyspe svagadgeld ptevtfpgcs crssscappg
       61 cpclsrghny sspglrlael qeqpfsrpvf ecnslcccge gchnrlvqrg lrlrlqvfrt
      121 rskgwgvral qpiprgsfvc eyagevlgfa earrriqaqs pqepnyiiav rehlhdgrvm
      181 etfvdptrvg nvgrflnhsc epnlfmvpvr vdsmvpklal faavdisage elsydysgrc
      241 hnfpeasred kpleeenslr kpcycgsrtc asflpwdssl fstpassp
//
LOCUS       XP_041319151             283 aa            linear   VRT 06-MAY-2021
DEFINITION  formylglycine-generating enzyme [Pyrgilauda ruficollis].
ACCESSION   XP_041319151
VERSION     XP_041319151.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463217.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="formylglycine-generating enzyme"
                     /calculated_mol_wt=31346
     Region          1..277
                     /region_name="FGE-sulfatase"
                     /note="Sulfatase-modifying factor enzyme 1; pfam03781"
                     /db_xref="CDD:397722"
     CDS             1..283
                     /gene="SUMF1"
                     /coded_by="XM_041463217.1:124..975"
                     /db_xref="GeneID:121351235"
ORIGIN      
        1 mvlipggvft mgtqepqiqq dgegparrvh lgsfymdqye vsnldfesfv nstgyiteae
       61 kfgdsfvfeg mlseavkadi hqavaaapww lpvkgaswrh pegpdssiss rmdhpvlhvs
      121 wndavafctw agkrlpteae weyscrggle nrlfpwgnkl qpkgqhyanv wqgefptnnt
      181 aedgykgtap vsafppngyg lynmvgnawe wtsdwwavhh spqelhnpqg pssgtdrvrk
      241 ggsymchksy cyryrcaars qntpdssasn lgfrcaatap gpr
//
LOCUS       XP_041319165             253 aa            linear   VRT 06-MAY-2021
DEFINITION  MICOS complex subunit MIC25 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319165
VERSION     XP_041319165.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463231.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..253
                     /product="MICOS complex subunit MIC25 isoform X1"
                     /calculated_mol_wt=28707
     Region          32..200
                     /region_name="MIC19_MIC25"
                     /note="MICOS complex subunit MIC19/MIC25; pfam05300"
                     /db_xref="CDD:461615"
     Region          209..243
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..253
                     /gene="CHCHD6"
                     /coded_by="XM_041463231.1:74..835"
                     /db_xref="GeneID:121351245"
ORIGIN      
        1 mgcsessqgg rkvsfglder ervrvlqgir ltedvvnrmk gssqsrrenq rspraangta
       61 psslaaegkp rpteiqppka sdssaeqely rrymeeqalv qeellrlakr ereaaseake
      121 rigiieerqr aaqlpvdlda wipsescrga velqgweadl krqeafyqeq lariekknae
      181 iykmtseqyq eaatkaeeri krrnadpica nlqseimkcy qenkrevlkc selakeyqrc
      241 vsaahkelfv nsg
//
LOCUS       XP_041319174             245 aa            linear   VRT 06-MAY-2021
DEFINITION  MICOS complex subunit MIC25 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319174
VERSION     XP_041319174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="MICOS complex subunit MIC25 isoform X2"
                     /calculated_mol_wt=27877
     Region          32..192
                     /region_name="MIC19_MIC25"
                     /note="MICOS complex subunit MIC19/MIC25; pfam05300"
                     /db_xref="CDD:461615"
     Region          201..235
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..245
                     /gene="CHCHD6"
                     /coded_by="XM_041463240.1:83..820"
                     /db_xref="GeneID:121351245"
ORIGIN      
        1 mgcsessqgg rkvsfglder ervrvlqgir ltedvvnrmk gssqsrrenq rspraangta
       61 psslaaegkp rpteiqppka sdssaeqely rrymeeqalv qeellrlakr ereaaseake
      121 rigiieerqr aaqlpvdlda wavelqgwea dlkrqeafyq eqlariekkn aeiykmtseq
      181 yqeaatkaee rikrrnadpi canlqseimk cyqenkrevl kcselakeyq rcvsaahkel
      241 fvnsg
//
LOCUS       XP_041319181             238 aa            linear   VRT 06-MAY-2021
DEFINITION  MICOS complex subunit MIC25 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041319181
VERSION     XP_041319181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463247.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="MICOS complex subunit MIC25 isoform X3"
                     /calculated_mol_wt=27081
     Region          32..185
                     /region_name="MIC19_MIC25"
                     /note="MICOS complex subunit MIC19/MIC25; pfam05300"
                     /db_xref="CDD:461615"
     Region          194..228
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..238
                     /gene="CHCHD6"
                     /coded_by="XM_041463247.1:74..790"
                     /db_xref="GeneID:121351245"
ORIGIN      
        1 mgcsessqgg rkvsfglder ervrvlqgir ltedvvnrmk gssqsrrenq rspraangta
       61 psslaaegkp rpteiqppka sdssaeqely rrymeeqalv qeellrlakr ereaaseake
      121 rigiieerqr aaqlavelqg weadlkrqea fyqeqlarie kknaeiykmt seqyqeaatk
      181 aeerikrrna dpicanlqse imkcyqenkr evlkcselak eyqrcvsaah kelfvnsg
//
LOCUS       XP_041319194            1235 aa            linear   VRT 06-MAY-2021
DEFINITION  cullin-associated NEDD8-dissociated protein 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319194
VERSION     XP_041319194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1235
                     /product="cullin-associated NEDD8-dissociated protein
                     1-like"
                     /calculated_mol_wt=136998
     Region          8..33
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(25..26,29,32..33,66..67,70,73..74,76,104..105,108,
                     111..112,115,152..153,156,159..160,193..194,197,200..201)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          49..76
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          86..116
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          129..160
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          149..202
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     Region          171..202
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          214..244
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          255..281
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          <345..>731
                     /region_name="PDS5"
                     /note="Sister chromatid cohesion protein PDS5 protein;
                     pfam20168"
                     /db_xref="CDD:466319"
     Region          568..598
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          610..638
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          647..676
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1044..1206
                     /region_name="TIP120"
                     /note="TATA-binding protein interacting (TIP20);
                     pfam08623"
                     /db_xref="CDD:430111"
     CDS             1..1235
                     /gene="LOC121351264"
                     /coded_by="XM_041463260.1:189..3896"
                     /db_xref="GeneID:121351264"
ORIGIN      
        1 masvsyhiss llekmtstdk dfrfmatndl mmelqkdsik ldedsekkvv kmllklledk
       61 ngevqnlavk clgplvgkvk eyqvetivdt lctnmlsdke qlrdissigl ktviselppa
      121 atgstmtanv ckkitaqltg aigkqedvsv qlealdilsd mlsrlggtly sfhssiltcl
      181 lpqltsprla vrkraiialg hlvltcsgni fseltehlla elkrnestst trtyiqcvag
      241 isrqaghrig ehlekiipli vqycnvddde lreycfqafe sfvrrcpkem dphissvmgl
      301 clkyitfdpn ynydneeeee emmetenged eeqesddeys ddddiswkvr raaakcleai
      361 vssrhdllqd fyrtlspali srfkereenv kadifnayis llkqtlptqs wlhssdasgk
      421 ddvpltmlqn qvpniikalh kqlkeksiks rqgcfsllte lasvlpgcla dhipalipgi
      481 vfsladksss snmridtlsf lhvllcnhqp evfhphvkal lpsvvtcigd pfykitseal
      541 lvtqqlvkvi rpldkpysfd akpyvkdlfp gtlkrlkaad idqevkerai scmgqiiysl
      601 gdhlstdlqp tlkiflerlk neitrlttvk altliasspl kidlrpilge glpilasflr
      661 knqralklst lnaldilvkn ysdslkpami epvltelpil itendmhvsq vtimflttla
      721 kvypscvski sgsvlaeifq lvhspllqgg alnaiidffq alvltrtaav gyaelmkqlt
      781 apvyssgsag asltlhkqay hsiakcvaal ssacpkeapa tvnqfvqdvk spkcspavqv
      841 laflflaevg rstnlsaqre lrsvileafs spseevksaa syalgnvsag nlkeylpsml
      901 keigsqpkrq ylllhslkev iscspadslt pyvediwall fkhcecteeg trnvvaeclg
      961 kltlvnpael lprlrkqlsa gspharstvv taikftitdq pqpidallkg cigdflktlq
     1021 dpdlnvrrva lalfnsaahn kpslirdlls tvlpslynet kvrrelirev emgpfkhtvd
     1081 dgldvrkaaf ecmytllesc ldrldiydyl nhvedglkdh ydirmltfim larlsvlcpn
     1141 avlqrlerli eplratcstk vkagsvkqef ekqdelkrsa mravaallti pevekspama
     1201 efssqirssp emaslfesiq kdsaslptse smdms
//
LOCUS       XP_041319207            1184 aa            linear   VRT 06-MAY-2021
DEFINITION  intraflagellar transport protein 122 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319207
VERSION     XP_041319207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463273.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1184
                     /product="intraflagellar transport protein 122 homolog
                     isoform X1"
                     /calculated_mol_wt=135470
     Region          <15..291
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          15..51
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          57..91
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          96..131
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          136..172
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          179..218
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          224..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          265..289
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <572..659
                     /region_name="Coatomer_WDAD"
                     /note="Coatomer WD associated region; cl24022"
                     /db_xref="CDD:451663"
     Region          635..859
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          <1148..1179
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..1184
                     /gene="IFT122"
                     /coded_by="XM_041463273.1:46..3600"
                     /db_xref="GeneID:121351269"
ORIGIN      
        1 mraaltwrdr aeqciydlaf kpdgtqliia agnrllvydt sdgtliqplk ghkdtvycva
       61 yakdgkrfas gsadksviiw tsklegilky thndsiqcvs ynplthqlas cssgdfglws
      121 peqksvskhk tssritccsw tndgqylalg mfngivsirn kngdekvkie rpggssspvw
      181 sicwnpsrde rndilavadw gqklsfyhls gkqigkdrvl nfdpccisyf tkgeylllgg
      241 sdrqvslftr dgvrlgtvge qsswvwtckv kpdsnyvavg cqdgtisfyq lifstvhgly
      301 kdryayrdnm tdvivqhlit eqkvrikgre lvkkiaiykn rlaiqmpeki liyelysdds
      361 admyyrvkek iikkfecnll vvcsdhiilc qekrlqclsf sgvkerewlm esliryikvi
      421 ggppgregll vglkngqilk ifvdnalaiv llkqatavrc ldmsasrskl avvdendtcl
      481 vydihtkell fqepnansva wntqcedmlc fsgggylnik asnfpvhqqk lqgfvvgyng
      541 skifclhvfs msavevpqsa pmyqylerkm fkeayqiacl gvtdadwrel amealeglef
      601 etakkaftrv rdlrylelis sienrkrqge nnhelfladv yayqgkfqea aklykrsgre
      661 glalemysel rmfdhakefl gsgdpkdtkm likkqadwak dinepkaave mylsagehmr
      721 aieisgdhgw vdmlieiark ldkaerepla kcafyfkqld npgyaaetym kvgdlkalvr
      781 lhvethrwee afalsekhpe fkdevyvpya qwlaesdrfe eaqkaflkag rqreavrvle
      841 qlthnavles rfsdaayyyw mlsmqcldia qenegqqtem lqkfhhfqhl aevyhvyhfi
      901 qryteepfsf hlpetlfnis rfllhsltke tplgiskvnt llalakqska lgayklarha
      961 ydklqglqip drfqksvelg sltirskpfh dseelvplcy rcstnnplln nlgnvcincr
     1021 qpfvfsassy evlhlvefyl edgitdeeav alidleaprv skrenkwqem mtdhvqslkl
     1081 ddstdiiedd dpftaklsfe qggsafvplv lsraalrams rrdvlikrwp rplrwqyyrs
     1141 llpdasitvc pscfqmfhte dyellilqnn ccpfcrrrid esnq
//
LOCUS       XP_041319213            1183 aa            linear   VRT 06-MAY-2021
DEFINITION  intraflagellar transport protein 122 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319213
VERSION     XP_041319213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1183
                     /product="intraflagellar transport protein 122 homolog
                     isoform X2"
                     /calculated_mol_wt=135342
     Region          <15..291
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          15..51
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          57..91
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          96..131
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          136..172
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          179..218
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          224..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          265..289
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <572..659
                     /region_name="Coatomer_WDAD"
                     /note="Coatomer WD associated region; cl24022"
                     /db_xref="CDD:451663"
     Region          635..859
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          <1147..1178
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..1183
                     /gene="IFT122"
                     /coded_by="XM_041463279.1:46..3597"
                     /db_xref="GeneID:121351269"
ORIGIN      
        1 mraaltwrdr aeqciydlaf kpdgtqliia agnrllvydt sdgtliqplk ghkdtvycva
       61 yakdgkrfas gsadksviiw tsklegilky thndsiqcvs ynplthqlas cssgdfglws
      121 peqksvskhk tssritccsw tndgqylalg mfngivsirn kngdekvkie rpggssspvw
      181 sicwnpsrde rndilavadw gqklsfyhls gkqigkdrvl nfdpccisyf tkgeylllgg
      241 sdrqvslftr dgvrlgtvge qsswvwtckv kpdsnyvavg cqdgtisfyq lifstvhgly
      301 kdryayrdnm tdvivqhlit eqkvrikgre lvkkiaiykn rlaiqmpeki liyelysdds
      361 admyyrvkek iikkfecnll vvcsdhiilc qekrlqclsf sgvkerewlm esliryikvi
      421 ggppgregll vglkngqilk ifvdnalaiv llkqatavrc ldmsasrskl avvdendtcl
      481 vydihtkell fqepnansva wntqcedmlc fsgggylnik asnfpvhqqk lqgfvvgyng
      541 skifclhvfs msavevpqsa pmyqylerkm fkeayqiacl gvtdadwrel amealeglef
      601 etakkaftrv rdlrylelis sienrkrqge nnhelfladv yayqgkfqea aklykrsgre
      661 glalemysel rmfdhakefl gsgdpkdtkm likkqadwak dinepkaave mylsagehmr
      721 aieisgdhgw vdmlieiark ldkaerepla kcafyfkqld npgyaaetym kvgdlkalvr
      781 lhvethrwee afalsekhpe fkdevyvpya qwlaesdrfe eaqkaflkag rqreavrvle
      841 qlthnavles rfsdaayyyw mlsmqcldia qenegqqtem lqkfhhfqhl aevyhvyhfi
      901 qryteepfsf hlpetlfnis rfllhsltke tplgiskvnt llalakqska lgayklarha
      961 ydklqglqip drfqksvelg sltirskpfh dseelvplcy rcstnnplln nlgnvcincr
     1021 qpfvfsassy evlhlvefyl edgitdeeav alidleaprv skrenkwqem mtdhvqslkl
     1081 ddstdiiedd dpftaklsfe ggsafvplvl sraalramsr rdvlikrwpr plrwqyyrsl
     1141 lpdasitvcp scfqmfhted yellilqnnc cpfcrrride snq
//
LOCUS       XP_041319222            1129 aa            linear   VRT 06-MAY-2021
DEFINITION  intraflagellar transport protein 122 homolog isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319222
VERSION     XP_041319222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1129
                     /product="intraflagellar transport protein 122 homolog
                     isoform X3"
                     /calculated_mol_wt=129153
     Region          <15..291
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          15..51
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          57..91
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          96..131
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          136..172
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          179..218
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          224..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          265..289
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <572..659
                     /region_name="Coatomer_WDAD"
                     /note="Coatomer WD associated region; cl24022"
                     /db_xref="CDD:451663"
     Region          635..859
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     CDS             1..1129
                     /gene="IFT122"
                     /coded_by="XM_041463288.1:46..3435"
                     /db_xref="GeneID:121351269"
ORIGIN      
        1 mraaltwrdr aeqciydlaf kpdgtqliia agnrllvydt sdgtliqplk ghkdtvycva
       61 yakdgkrfas gsadksviiw tsklegilky thndsiqcvs ynplthqlas cssgdfglws
      121 peqksvskhk tssritccsw tndgqylalg mfngivsirn kngdekvkie rpggssspvw
      181 sicwnpsrde rndilavadw gqklsfyhls gkqigkdrvl nfdpccisyf tkgeylllgg
      241 sdrqvslftr dgvrlgtvge qsswvwtckv kpdsnyvavg cqdgtisfyq lifstvhgly
      301 kdryayrdnm tdvivqhlit eqkvrikgre lvkkiaiykn rlaiqmpeki liyelysdds
      361 admyyrvkek iikkfecnll vvcsdhiilc qekrlqclsf sgvkerewlm esliryikvi
      421 ggppgregll vglkngqilk ifvdnalaiv llkqatavrc ldmsasrskl avvdendtcl
      481 vydihtkell fqepnansva wntqcedmlc fsgggylnik asnfpvhqqk lqgfvvgyng
      541 skifclhvfs msavevpqsa pmyqylerkm fkeayqiacl gvtdadwrel amealeglef
      601 etakkaftrv rdlrylelis sienrkrqge nnhelfladv yayqgkfqea aklykrsgre
      661 glalemysel rmfdhakefl gsgdpkdtkm likkqadwak dinepkaave mylsagehmr
      721 aieisgdhgw vdmlieiark ldkaerepla kcafyfkqld npgyaaetym kvgdlkalvr
      781 lhvethrwee afalsekhpe fkdevyvpya qwlaesdrfe eaqkaflkag rqreavrvle
      841 qlthnavles rfsdaayyyw mlsmqcldia qenegqqtem lqkfhhfqhl aevyhvyhfi
      901 qryteepfsf hlpetlfnis rfllhsltke tplgiskvnt llalakqska lgayklarha
      961 ydklqglqip drfqksvelg sltirskpfh dseelvplcy rcstnnplln nlgnvcincr
     1021 qpfvfsassy evlhlvefyl edgitdeeav alidleaprv skrenkwqem mtdhvqslkl
     1081 ddstdiiedd dpftaklsfe mfhtedyell ilqnnccpfc rrridesnq
//
LOCUS       XP_041319231             135 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L32 [Pyrgilauda ruficollis].
ACCESSION   XP_041319231
VERSION     XP_041319231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..135
                     /product="60S ribosomal protein L32"
                     /calculated_mol_wt=15785
     Region          17..124
                     /region_name="Ribosomal_L32e"
                     /note="Ribosomal protein L32; pfam01655"
                     /db_xref="CDD:460283"
     CDS             1..135
                     /gene="RPL32"
                     /coded_by="XM_041463297.1:320..727"
                     /db_xref="GeneID:121351286"
ORIGIN      
        1 mpalrplvkp kivkkrtkkf irhqsdryvk ikrnwrkprg idnrvrrrfk gqilmpnigy
       61 gsnkktkhml ptgfrkflvh nvkelevlmm snksycaeia hnvssknrkv iveraaqlai
      121 kitnpnarlr seene
//
LOCUS       XP_041319246             389 aa            linear   VRT 06-MAY-2021
DEFINITION  26S proteasome non-ATPase regulatory subunit 6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319246
VERSION     XP_041319246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="26S proteasome non-ATPase regulatory subunit 6"
                     /calculated_mol_wt=45423
     Region          15..382
                     /region_name="RPN7"
                     /note="26S proteasome regulatory complex component,
                     contains PCI domain [Posttranslational modification,
                     protein turnover, chaperones]; COG5187"
                     /db_xref="CDD:227514"
     CDS             1..389
                     /gene="PSMD6"
                     /coded_by="XM_041463312.1:110..1279"
                     /db_xref="GeneID:121351292"
ORIGIN      
        1 mplenleeeg lpknpdlria qlrfllslrp rapdpaarde lmaavrlhnm apyyealcks
       61 lewqmdtdll nkmkkaneee lkrldneled aekilgesei rdammakaey lcrigdkega
      121 ltafrktydk tvalghrldi vfyllriglf ymdndlitrn iekaksliee ggdwdrrnrl
      181 kvyqglycva irdfkqaael fldtvstfts yelmdyktfv tytvyvsmia ldrpdlrekv
      241 ikgaeileal hslpavrqyl fslyecryaa ffqslavveq emkkdwlfap hyryyvremr
      301 ihaysqlles yrsltlgyma eafgvsvefi dqelsrfiaa grlhckidkv neivetnrpd
      361 sknwqyqeti kkgdlllnri qklsrvinm
//
LOCUS       XP_041319258             156 aa            linear   VRT 06-MAY-2021
DEFINITION  protein BTG1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041319258
VERSION     XP_041319258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463324.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="protein BTG1-like"
                     /calculated_mol_wt=17476
     Region          1..115
                     /region_name="BTG"
                     /note="BTG family; pfam07742"
                     /db_xref="CDD:462251"
     CDS             1..156
                     /gene="LOC121351298"
                     /coded_by="XM_041463324.1:456..926"
                     /db_xref="GeneID:121351298"
ORIGIN      
        1 mrteistaaa fvtrllraag gvgeeqlrcf reclqeamre hykhhwfplv pskgsgyrci
       61 rinhkmdpli gkaagmigls herlfqllps eltlwvdpfe vsyrigedgs icvlyespqp
      121 ggkaakqles rtsckeewri grsspsksyn mmtvss
//
LOCUS       XP_041319270             967 aa            linear   VRT 06-MAY-2021
DEFINITION  contactin-6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041319270
VERSION     XP_041319270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..967
                     /product="contactin-6-like"
                     /calculated_mol_wt=105533
     Region          <2..48
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          10..14
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          25..30
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          39..42
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          57..137
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          68..72
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          82..86
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          107..111
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          121..126
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          155..243
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          173..177
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          186..190
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          208..212
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          222..227
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          235..238
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          247..331
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          263..267
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          276..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          297..301
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..316
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          324..327
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          336..424
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          355..359
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          368..372
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          390..394
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          404..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          417..420
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          428..526
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          445..449
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          460..464
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          488..492
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          502..507
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          509..>928
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          515..518
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          526..618
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(526,595,610)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(611..612,614..615)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..967
                     /gene="LOC121351309"
                     /coded_by="XM_041463336.1:16..2919"
                     /db_xref="GeneID:121351309"
ORIGIN      
        1 msyhyrlvgg slainnphkn qdigtyqcla tnsfgtilsr kaklqfayle nfetrprspv
       61 svregqgvvl lcgtpphhga lsytwifnnn tldlredsrr fvsqatgnly lakvepwdvg
      121 nytcavssae aqrqvwgtpt altlradgvm geyepkievr fpetthaakg ssvrlecfal
      181 gnpvpsiswk rsdgnslakk iqhnrtggvl eipnieqede gsyeciaant rginiargql
      241 lvyappewdk riqntflsly dslfweckar gkpspsyswl kngqplmsee riqiengtll
      301 ipmlnlsdsg lyqcvaenky dtiyanaelr viaaapdfsr spvkklsvvq vggevtisck
      361 psaspraavs wrkgsevlrq nkrvmfledg slrisniskv dagvytcvat nqfgtarnsg
      421 nlivkertvi tippsdtdat vgesivlpcq vshdpsldvg fswsfngqri dlsrgihhfe
      481 rigresagdl mirniqlhhs gkyvcmvqts ldsqsatadi ivrgppgppe dvkvehvsst
      541 taglswkpga dnnspvqiys vqtrtpfsvg wqgvatapev ingrthkatv vdlspwveye
      601 frvvasnsvg igepsrpsal lktkaavpvv aptniggggg srselvitwe pvseelqnge
      661 gfgyvvmfrp lgsttwtkav vasvesskyv yrnesitpls pfevkvgvyn negegtlssi
      721 siiysgedep qmapagasal svsaaavevs wlpipwnrht grvlgyevly widdpkesta
      781 gkvrvsgnvt aknitglran tvyfatvray ntagtgpsst pvnvttkksp psqppaniaw
      841 kltnskicln wehvktmene sevlgykily rqnrqskahi letnntsael lvpfeedyli
      901 eirtvsdggd gssseeirip kisslssgam klsqrinhtl tsgilllssv llnpfpcwfq
      961 qcsamdf
//
LOCUS       XP_041319281             865 aa            linear   VRT 06-MAY-2021
DEFINITION  inter-alpha-trypsin inhibitor heavy chain H4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319281
VERSION     XP_041319281.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463347.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..865
                     /product="inter-alpha-trypsin inhibitor heavy chain H4"
                     /calculated_mol_wt=97314
     Region          17..143
                     /region_name="VIT"
                     /note="Vault protein Inter-alpha-Trypsin domain;
                     smart00609"
                     /db_xref="CDD:197803"
     Region          266..444
                     /region_name="vWA_interalpha_trypsin_inhibitor"
                     /note="vWA_interalpha trypsin inhibitor (ITI): ITI is a
                     glycoprotein composed of three polypeptides- two heavy
                     chains and one light chain (bikunin). Bikunin confers the
                     protease-inhibitor function while the heavy chains are
                     involved in rendering stability to...; cd01461"
                     /db_xref="CDD:238738"
     Site            order(275,277,279,345,377)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238738"
     Region          695..859
                     /region_name="ITI_HC_C"
                     /note="Inter-alpha-trypsin inhibitor heavy chain
                     C-terminus; cl46397"
                     /db_xref="CDD:480737"
     CDS             1..865
                     /gene="ITIH4"
                     /coded_by="XM_041463347.1:1..2598"
                     /db_xref="GeneID:121351317"
ORIGIN      
        1 meqrtllall vfsslivlae tndqkpavei yslhvdckvt srfahtvits rivnranesr
       61 eatfevelpk tafitnfsms idgevypgii kekaaaqney dsavsqgqsa glvkitdrkl
      121 eqfhvsvsia aaskvafelt yeellkrqlg kyellikvrp kqlvkhfqid vhifepqgir
      181 fletdstfmt nelsealtke qnetkahilf kpsldqqkkn seldetllng dfvvrydvkr
      241 eatagdiqiv ngyfvhyfap qempvfpknv ifvidrsgsm tgrkieqtrd allkilqdlr
      301 qedhfsfitf nnkvvewkss llpateenma saaalvqtlt arggtdisga llaavgllek
      361 aeglpersvs miilltdgqp tsgernvevi qenvqkavng kyalfclgfg fdvsykflek
      421 malsnggiar riyenadaal qlqgfyqeva tpilmqiemq ypensieglt knnfklffeg
      481 seiivsgkis neldllpvei kaqshtsnlt lkeeanvkek eqvfqnqryi fgnfierlwa
      541 yltiqqlmek aisaqeedrk aleaqaldls lrysfvtplt smvvtkpqqq eelankptea
      601 dnekpsnlpa gasvkrfssr mlweddagrw rpelqtgsnr kmfstvsrfr vatrtqpiad
      661 ehpqlllqlp rqnericlni dktaqtsihl lsdpeqgltv tgklgeginh fvqfdinyvn
      721 ppvqihvyth ailvshnnnn nwlswtksts stiqglkvsv ekersvtasl pdtatvkvsl
      781 vrfpedflgl yflntdrfsd kvtgvlgqfy skaqfgsnsn ndqtaverll rvsgsehkvs
      841 rlykkdyrle sanepvscws idltp
//
LOCUS       XP_041319294             481 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b-c1 complex subunit 1, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319294
VERSION     XP_041319294.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463360.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="cytochrome b-c1 complex subunit 1,
                     mitochondrial"
                     /calculated_mol_wt=52804
     Region          36..466
                     /region_name="PqqL"
                     /note="Predicted Zn-dependent peptidase, M16 family
                     [General function prediction only]; COG0612"
                     /db_xref="CDD:440377"
     CDS             1..481
                     /gene="LOC121351324"
                     /coded_by="XM_041463360.1:54..1499"
                     /db_xref="GeneID:121351324"
ORIGIN      
        1 maarsvcrag saagrallwg prpsaalltl trkrgaatya qtlqnipetq vttlenglrv
       61 aseesnqptc tvglwieags ryeepqtnga affvehmalk gtkkrpgsaf ekeveslgah
      121 lsgytsreqt afyikalskd mpkavellsd lvqncaleds qmekergiil qelkeldssl
      181 advtfdylha tayqgtalah tvegttenik rltradlasy idthfraprm vlaaaggvsh
      241 relvdaakqh ftgapftskg dsvptlkrcr ftgseirard dalplahial avegpgwadp
      301 dnvvlnvana iigrydrtfv ggknqsskla alavehnlch sfepfntsys dtglfgfhfv
      361 sdplsvddmm fcaqgewmrl ctsttesevt raknylrkam vaqldgttrv cenigshllh
      421 ygrripleew darisavdar mvrdvcskyi ydkcpaiaav gpieqlldyn rlrsamywvr
      481 l
//
LOCUS       XP_041319309             161 aa            linear   VRT 06-MAY-2021
DEFINITION  bis(5'-adenosyl)-triphosphatase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319309
VERSION     XP_041319309.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463375.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..161
                     /product="bis(5'-adenosyl)-triphosphatase isoform X1"
                     /calculated_mol_wt=17917
     Region          4..117
                     /region_name="FHIT"
                     /note="FHIT (fragile histidine family): FHIT proteins,
                     related to the HIT family carry a motif HxHxH/Qxx (x, is a
                     hydrophobic amino acid), On the basis of sequence,
                     substrate specificity, structure, evolution and mechanism,
                     HIT proteins are classified into...; cd01275"
                     /db_xref="CDD:238606"
     Site            order(24,26..27,34,36,82,89,91,95,97)
                     /site_type="active"
                     /note="nucleotide binding site/active site [active]"
                     /db_xref="CDD:238606"
     Site            order(93,95,97..99)
                     /site_type="active"
                     /note="HIT family signature motif [active]"
                     /db_xref="CDD:238606"
     Site            95
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238606"
     CDS             1..161
                     /gene="FHIT"
                     /coded_by="XM_041463375.1:244..729"
                     /db_xref="GeneID:121351327"
ORIGIN      
        1 mlrfgqhlik psvvflrtel cfalvnrrpv vpghvlvcpl rpverfrdlc peevadlfct
       61 aqrvgnvvek hfcgtsltfs iqdgpeagqt vkhvhvhvlp rragdfsrnd dvyeeeveil
      121 ggcnvglagc vqsrdccsdt tkmipltsgg qrkkwqlkqk f
//
LOCUS       XP_041319319             148 aa            linear   VRT 06-MAY-2021
DEFINITION  bis(5'-adenosyl)-triphosphatase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319319
VERSION     XP_041319319.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463385.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..148
                     /product="bis(5'-adenosyl)-triphosphatase isoform X2"
                     /calculated_mol_wt=16953
     Region          4..123
                     /region_name="FHIT"
                     /note="FHIT (fragile histidine family): FHIT proteins,
                     related to the HIT family carry a motif HxHxH/Qxx (x, is a
                     hydrophobic amino acid), On the basis of sequence,
                     substrate specificity, structure, evolution and mechanism,
                     HIT proteins are classified into...; cd01275"
                     /db_xref="CDD:238606"
     Site            order(24,26..27,34,36,82,89,91,95,97)
                     /site_type="active"
                     /note="nucleotide binding site/active site [active]"
                     /db_xref="CDD:238606"
     Site            order(93,95,97..99)
                     /site_type="active"
                     /note="HIT family signature motif [active]"
                     /db_xref="CDD:238606"
     Site            95
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238606"
     CDS             1..148
                     /gene="FHIT"
                     /coded_by="XM_041463385.1:240..686"
                     /db_xref="GeneID:121351327"
ORIGIN      
        1 mlrfgqhlik psvvflrtel cfalvnrrpv vpghvlvcpl rpverfrdlc peevadlfct
       61 aqrvgnvvek hfcgtsltfs iqdgpeagqt vkhvhvhvlp rragdfsrnd dvyeelqrhd
      121 kddspdkwrt eeemaaeaei lkkyfqen
//
LOCUS       XP_041319334             607 aa            linear   VRT 06-MAY-2021
DEFINITION  ER degradation-enhancing alpha-mannosidase-like protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041319334
VERSION     XP_041319334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="ER degradation-enhancing alpha-mannosidase-like
                     protein 1"
                     /calculated_mol_wt=68120
     Region          94..539
                     /region_name="Glyco_hydro_47"
                     /note="Glycosyl hydrolase family 47; pfam01532"
                     /db_xref="CDD:460241"
     CDS             1..607
                     /gene="EDEM1"
                     /coded_by="XM_041463400.1:34..1857"
                     /db_xref="GeneID:121351340"
ORIGIN      
        1 mrwrsvvlgl lllrlglqal lallpalarg lclhprlpcp gprppalpgp pvgaagrgar
       61 lwgaaaggde yerrysgafp pqlrarlrda argmfvfgyd symehafprd eldplhcrgr
      121 gpdrrdpsnl nindvlgnys ltlidaldtl avmgnssefq kavklvidtv sfdkdstvqv
      181 featirvlgs llsahiiitd tkqpfgdmti kdydnellhl ahdlavrllp afentktgip
      241 yprvnlkkgv ppdshnetct agagsllvef gilsrllgds tfewvarrav kalwslrsnn
      301 tgllgnvvni qtghwvgkqs glgagsdsfy eyllksyilf gekedlemfn aayqniqnhl
      361 rrgreacneg egdpplyvnv nmytgqlmnt widslqaffp glqvligdve daiclhafyy
      421 aiwkrygalp erynwqlqap dvpfyplrpe lvestyllyq atknpfylhv gmdilqslek
      481 ytkakcgyat lhhvvektke drmesfflse tckylyllfd eenpvhksgn kfmftteghv
      541 vsvderfrss lwedilpage dslkakpsel kaanfssncn rvpderryll plksnymrqi
      601 drmvgli
//
LOCUS       XP_041319348             161 aa            linear   VRT 06-MAY-2021
DEFINITION  troponin C, slow skeletal and cardiac muscles [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319348
VERSION     XP_041319348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463414.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..161
                     /product="troponin C, slow skeletal and cardiac muscles"
                     /calculated_mol_wt=18299
     Region          9..157
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..161
                     /gene="TNNC1"
                     /coded_by="XM_041463414.1:109..594"
                     /db_xref="GeneID:121351344"
ORIGIN      
        1 mddiykaave qlteeqknef kaafdifvlg aedgcistke lgkvmrmlgq nptpeelqem
       61 idevdedgsg tvdfdeflvm mvrcmkddsk gkteeelsdl frmfdknadg yidleelkim
      121 lqatgetite ddieelmkdg dknndgridy deflefmkgv e
//
LOCUS       XP_041319362             869 aa            linear   VRT 06-MAY-2021
DEFINITION  metabotropic glutamate receptor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319362
VERSION     XP_041319362.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463428.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..869
                     /product="metabotropic glutamate receptor 2"
                     /calculated_mol_wt=96678
     Region          30..482
                     /region_name="PBP1_mGluR_groupII"
                     /note="ligand binding domain of the group II metabotropic
                     glutamate receptor; cd06375"
                     /db_xref="CDD:380598"
     Site            order(61,65,147..148,169..171,219,298,380)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380598"
     Site            order(100,103,153,156,179,243)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380598"
     Region          495..545
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          565..818
                     /region_name="7tmC_mGluR2"
                     /note="metabotropic glutamate receptor 2 in group 2,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15447"
                     /db_xref="CDD:320563"
     Region          565..590
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320563"
     Site            order(568,571..572,575..576,578..579,613,617,620..621,629,
                     633)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320563"
     Region          602..623
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320563"
     Site            order(622,634..635,638..639,642,722,727,730..731,734,768,
                     771..772,775,779,789..790,793,796,800)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320563"
     Region          632..656
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320563"
     Region          678..698
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320563"
     Region          723..749
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320563"
     Region          757..780
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320563"
     Region          787..812
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320563"
     CDS             1..869
                     /gene="GRM2"
                     /coded_by="XM_041463428.1:19..2628"
                     /db_xref="GeneID:121351351"
ORIGIN      
        1 mavplaawlg lmhlatclaa ghgmagkkei smdgdlvigg lfpvhekgvg sedcgkineh
       61 rgiqrleaml faldeinkdg silpgvklga hildtcskdt yaleqsldfv rasltrvdgs
      121 ehicpdgsya vhddvptait gviggsysdv siqvanllrl fqipqisyas tsaklsdksr
      181 ydyfartvpp dfyqakamae ilrffnwtyv stvasegdyg etgieafeqe armrniciat
      241 sekvgrsmnk ktydgvvral lqkpnarvvv lftrsedare llaaaqranv sfmwvasdgw
      301 galesvvags eavaegaiti elaaypikef asyfrnlhpy nnsrnpwfre fweqkfrcsf
      361 htqdcsrysl ktgkfepesk itfvvnavya mahslhnmhr tlcpnstklc damkpvngkr
      421 fykdfilnvn fdapfrpadt esvvrfdryg dgigrynifn yhyvdgryry qkvgywaegl
      481 vldtslipwa etsipvsqcs dpckkneiks mqpgdiccwi cipcqpyeyl ldeftcmdcg
      541 lgywpnetln gcyelpqeyi rwkdvwaigp vtisclgfis tlfvigvfvk nndtpivkas
      601 grelcyillt gvlmcysmtf ifiakpstgv ctlrrlglgt sfavcysall tktnriarif
      661 sgvkegvqrp rfisptsqvv icmaliscql iiviiwllve tpgtgketep dkryivtlkc
      721 nnrdsnmlis ltynvllivl ctvyafktrk cpenfneakf igftmyttci iwlaflpify
      781 vtssdyrvqt ttmcisvsls gtvvlgclft pklhiilfqp qknvashrvg tarfsvaaas
      841 ssqshgsasp yvptvcngre vvdsttssl
//
LOCUS       XP_041319377             466 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelial transcription factor GATA-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319377
VERSION     XP_041319377.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463443.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..466
                     /product="endothelial transcription factor GATA-2"
                     /calculated_mol_wt=49974
     Region          201..>359
                     /region_name="GAT1"
                     /note="GATA Zn-finger-containing transcription factor
                     [Transcription]; COG5641"
                     /db_xref="CDD:227928"
     Region          280..330
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(281,284,302,305)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(290..291,293,302..312,329)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     Region          335..384
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(335,338,356,359)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(344..345,347,356..366,382,384)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..466
                     /gene="GATA2"
                     /coded_by="XM_041463443.1:397..1797"
                     /db_xref="GeneID:121351355"
ORIGIN      
        1 mevatdqprw mahhavlngq hpdshhpglp hnymepaqll ppdevdvffn hldsqgnpyy
       61 ansahararv sysqaharlt gsqmcrphli hspgipwlds skaalsahhh npwtvspftk
      121 tplhpsaaga pgaisvypgs stsstasvss ltpashsgsh lfgfpptppk evspdpnsts
      181 aaspsssaga rqedkdsiky qvslsegmkm esasplrssl tsmgaqpsth hpiptypsyv
      241 paahdysssl fhpgsflggp assftpkprs karscsegre cvncgatatp lwrrdgtghy
      301 lcnacglyhk mngqnrplik pkrrlsaarr agtccancqt ttttlwrrna ngdpvcnacg
      361 lyyklhnvnr pltmkkegiq trnrkmsnks kkskkgsecf eelskcmqek sspfsaaala
      421 shmapmghlp pfshsghilp tptpihpsss isfghphpss mvtamg
//
LOCUS       XP_041319387             466 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelial transcription factor GATA-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319387
VERSION     XP_041319387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463453.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..466
                     /product="endothelial transcription factor GATA-2"
                     /calculated_mol_wt=49974
     Region          201..>359
                     /region_name="GAT1"
                     /note="GATA Zn-finger-containing transcription factor
                     [Transcription]; COG5641"
                     /db_xref="CDD:227928"
     Region          280..330
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(281,284,302,305)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(290..291,293,302..312,329)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     Region          335..384
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(335,338,356,359)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(344..345,347,356..366,382,384)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..466
                     /gene="GATA2"
                     /coded_by="XM_041463453.1:828..2228"
                     /db_xref="GeneID:121351355"
ORIGIN      
        1 mevatdqprw mahhavlngq hpdshhpglp hnymepaqll ppdevdvffn hldsqgnpyy
       61 ansahararv sysqaharlt gsqmcrphli hspgipwlds skaalsahhh npwtvspftk
      121 tplhpsaaga pgaisvypgs stsstasvss ltpashsgsh lfgfpptppk evspdpnsts
      181 aaspsssaga rqedkdsiky qvslsegmkm esasplrssl tsmgaqpsth hpiptypsyv
      241 paahdysssl fhpgsflggp assftpkprs karscsegre cvncgatatp lwrrdgtghy
      301 lcnacglyhk mngqnrplik pkrrlsaarr agtccancqt ttttlwrrna ngdpvcnacg
      361 lyyklhnvnr pltmkkegiq trnrkmsnks kkskkgsecf eelskcmqek sspfsaaala
      421 shmapmghlp pfshsghilp tptpihpsss isfghphpss mvtamg
//
LOCUS       XP_041319409             321 aa            linear   VRT 06-MAY-2021
DEFINITION  testis-expressed protein 264 [Pyrgilauda ruficollis].
ACCESSION   XP_041319409
VERSION     XP_041319409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="testis-expressed protein 264"
                     /calculated_mol_wt=34805
     Region          <45..>115
                     /region_name="SbmC"
                     /note="DNA gyrase inhibitor GyrI/SbmC [Replication,
                     recombination and repair]; COG3449"
                     /db_xref="CDD:442672"
     CDS             1..321
                     /gene="TEX264"
                     /coded_by="XM_041463475.1:179..1144"
                     /db_xref="GeneID:121351371"
ORIGIN      
        1 mtdwvllgli aalvvllllt vfafvvysgl ftevvvsags ppvgsmtlay kfrvgpyges
       61 gqlftdgcsi ssklcsigvy ydnphtvspe kcrfaigril segdakpsee qikrfqkygf
      121 kifsfpapsh vvmatfpftt plsihlavnr vhpaldtyik erklcahpri eiykqdriyf
      181 vcplarqgdf yvpemkeler ksraaaavae daqtditgvd tmsetssism eattdsrdts
      241 vatsillpfp gsrgreeadn rsehsysesg asgssfeeld leaagdgega pgllpdagya
      301 gsqevtdkwt kepiaaerge e
//
LOCUS       XP_041319418             321 aa            linear   VRT 06-MAY-2021
DEFINITION  testis-expressed protein 264 [Pyrgilauda ruficollis].
ACCESSION   XP_041319418
VERSION     XP_041319418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463484.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="testis-expressed protein 264"
                     /calculated_mol_wt=34805
     Region          <45..>115
                     /region_name="SbmC"
                     /note="DNA gyrase inhibitor GyrI/SbmC [Replication,
                     recombination and repair]; COG3449"
                     /db_xref="CDD:442672"
     CDS             1..321
                     /gene="TEX264"
                     /coded_by="XM_041463484.1:606..1571"
                     /db_xref="GeneID:121351371"
ORIGIN      
        1 mtdwvllgli aalvvllllt vfafvvysgl ftevvvsags ppvgsmtlay kfrvgpyges
       61 gqlftdgcsi ssklcsigvy ydnphtvspe kcrfaigril segdakpsee qikrfqkygf
      121 kifsfpapsh vvmatfpftt plsihlavnr vhpaldtyik erklcahpri eiykqdriyf
      181 vcplarqgdf yvpemkeler ksraaaavae daqtditgvd tmsetssism eattdsrdts
      241 vatsillpfp gsrgreeadn rsehsysesg asgssfeeld leaagdgega pgllpdagya
      301 gsqevtdkwt kepiaaerge e
//
LOCUS       XP_041319440             691 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein ZXDC [Pyrgilauda ruficollis].
ACCESSION   XP_041319440
VERSION     XP_041319440.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463506.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..691
                     /product="zinc finger protein ZXDC"
                     /calculated_mol_wt=74307
     Region          4..27
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          43..>110
                     /region_name="zf-C2H2_8"
                     /note="C2H2-type zinc ribbon; pfam15909"
                     /db_xref="CDD:464935"
     Region          43..65
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          76..95
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <138..277
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          167..186
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(171,173,175,177..178,181..182,185,201,203,207..208,
                     211..212,215,231,233,235,237..238,241..242,245)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          194..216
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          224..246
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          254..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..691
                     /gene="ZXDC"
                     /coded_by="XM_041463506.1:16..2091"
                     /db_xref="GeneID:121351389"
ORIGIN      
        1 mvacpeprcg eafprkqqlr lhrlsahggg edgrggaarp fgcpvpgcaw sfatayklrr
       61 hlhshdklrp facaapgctk rfttvynlra hsraheqeaa hkceacgqrf psaarlaahr
      121 rrshleperp frcdfpgcer tfitvsalfs hnrahfreqe qfscsfpgcn kqydkacrlk
      181 ihmrshtger pficdfegcg wsftsmskll rhkrkheddr rfmcpvegcg ksftraehlk
      241 ghsithlgtk pfecpvegcc akfsarssly ihskkhlqdv dslksrcpvs scnklftskh
      301 smkthmvkqh nfspdlltql eatcsltpss eltspgqsdl snidlvslfs nvssnnsgia
      361 admalvnsgi vtidvasvgs tlggslpvnn sslsqavdpl ilvassdmpq sldsslllgt
      421 natvlqqstl nlddvqtvna ealgslasls vrnpsqdvhg ltcsnnltid tatltpsssl
      481 gstnvpellt pskaernllp gsdvvgqqeg skvvtqfvfs nppgsysaqk emdlgavtgs
      541 sflessgsar tdyraiqlak kkkqkgngss tgasgsgqrk nkggkvsptn fssstpgsrl
      601 ggnivlpngg ltirdpatga qyvqiqllqd dspgegdlpf qlssqssssh sqltvdlpvy
      661 ilqephnste ddagsdnsqf tgstinlqdl e
//
LOCUS       XP_041319452              75 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319452
VERSION     XP_041319452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..75
                     /product="small integral membrane protein 4 isoform X1"
                     /calculated_mol_wt=9106
     Region          4..71
                     /region_name="UPF0640"
                     /note="Uncharacterized protein family UPF0640; pfam15114"
                     /db_xref="CDD:464511"
     CDS             1..75
                     /gene="SMIM4"
                     /coded_by="XM_041463518.1:138..365"
                     /db_xref="GeneID:121351396"
ORIGIN      
        1 mlvservkrl lklvpgerrf gfyrflpfff vlggamewfm invrigketf cewddvyrrk
       61 qserlyearm ekgef
//
LOCUS       XP_041319461              72 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319461
VERSION     XP_041319461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..72
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..72
                     /product="small integral membrane protein 4 isoform X2"
                     /calculated_mol_wt=8735
     Region          4..68
                     /region_name="UPF0640"
                     /note="Uncharacterized protein family UPF0640; pfam15114"
                     /db_xref="CDD:464511"
     CDS             1..72
                     /gene="SMIM4"
                     /coded_by="XM_041463527.1:138..356"
                     /db_xref="GeneID:121351396"
ORIGIN      
        1 mlvservkrl lklvpgerrf gfyrflpfff vlggamewfm invrigketf ydvyrrkqse
       61 rlyearmekg ef
//
LOCUS       XP_041319474             592 aa            linear   VRT 06-MAY-2021
DEFINITION  protein DENND6A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319474
VERSION     XP_041319474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..592
                     /product="protein DENND6A isoform X1"
                     /calculated_mol_wt=67743
     Region          155..343
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; cl11519"
                     /db_xref="CDD:472208"
     Region          254..360
                     /region_name="SPA"
                     /note="Stabilization of polarity axis; cl40631"
                     /db_xref="CDD:454797"
     CDS             1..592
                     /gene="DENND6A"
                     /coded_by="XM_041463540.1:72..1850"
                     /db_xref="GeneID:121351407"
ORIGIN      
        1 msrrgrgpes gpggaevaae daepaepesp dqclsllpwd rfsawlhcvc vvgfdlelgq
       61 aveviypphs kltdkektni cylsfpdsns gclgdtqfcf rfrrspgrkv slccfldqld
      121 rdlpvylkkd sayyygyvyf rqvrdkslkr gyfqkslvli sklpyvhlfr tmlkqiapey
      181 fekseaflea vcsdvdrwpp pvpgkvlqlp imglimklri ptyrdkpgta pivqnmhqad
      241 aqismalptv hevdlfrcfc pvffhiqmlw elvllgeplv vmapspaess etvlalvsci
      301 splkycsdfr pyftihdsef keyttrtqap psvilgvtnp ffaktlqhwp hiirigdikl
      361 pgevpkqvkv kklknlktld skpgvytsyk pylnrdeeiv kqlqkgvqqk rpteaqsvil
      421 rryfleltes fiipleryva slmplqkcis pwksppqlrq fsqddfmktl ekagpqltsg
      481 lkgdwiglyr hflkspnfdg wfrsrqkemt qklealhlea lcnenlvfws qkhtevetvd
      541 lvlklknkll qadrehlpvk tdtlkklqth indiilalpd dlqdillktg tt
//
LOCUS       XP_041319481             492 aa            linear   VRT 06-MAY-2021
DEFINITION  protein DENND6A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319481
VERSION     XP_041319481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="protein DENND6A isoform X2"
                     /calculated_mol_wt=55800
     Region          154..260
                     /region_name="SPA"
                     /note="Stabilization of polarity axis; cl40631"
                     /db_xref="CDD:454797"
     CDS             1..492
                     /gene="DENND6A"
                     /coded_by="XM_041463547.1:72..1550"
                     /db_xref="GeneID:121351407"
ORIGIN      
        1 msrrgrgpes gpggaevaae daepaepesp dqclsllpwd rfsawlhcvc vvgfdlelgq
       61 aveviypphs kltdkektni cylsfpdsns vcsdvdrwpp pvpgkvlqlp imglimklri
      121 ptyrdkpgta pivqnmhqad aqismalptv hevdlfrcfc pvffhiqmlw elvllgeplv
      181 vmapspaess etvlalvsci splkycsdfr pyftihdsef keyttrtqap psvilgvtnp
      241 ffaktlqhwp hiirigdikl pgevpkqvkv kklknlktld skpgvytsyk pylnrdeeiv
      301 kqlqkgvqqk rpteaqsvil rryfleltes fiipleryva slmplqkcis pwksppqlrq
      361 fsqddfmktl ekagpqltsg lkgdwiglyr hflkspnfdg wfrsrqkemt qklealhlea
      421 lcnenlvfws qkhtevetvd lvlklknkll qadrehlpvk tdtlkklqth indiilalpd
      481 dlqdillktg tt
//
LOCUS       XP_041319493             413 aa            linear   VRT 06-MAY-2021
DEFINITION  class E basic helix-loop-helix protein 40 [Pyrgilauda ruficollis].
ACCESSION   XP_041319493
VERSION     XP_041319493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463559.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="class E basic helix-loop-helix protein 40"
                     /calculated_mol_wt=45198
     Region          40..129
                     /region_name="bHLH-O_DEC1"
                     /note="basic helix-loop-helix-orange (bHLH-O) domain found
                     in differentially expressed in chondrocytes protein 1
                     (DEC1) and similar proteins; cd19749"
                     /db_xref="CDD:381592"
     Site            order(57..59,62,64..65,69,92..93)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381592"
     Site            order(64..65,67..69,71..72,74..75,78..79,82,90,92..94,
                     97..98,100..101,103..105,107..108,111)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381592"
     Region          140..184
                     /region_name="ORANGE"
                     /note="Orange domain; smart00511"
                     /db_xref="CDD:128787"
     CDS             1..413
                     /gene="BHLHE40"
                     /coded_by="XM_041463559.1:206..1447"
                     /db_xref="GeneID:121351419"
ORIGIN      
        1 meripsaqpp pgclgklpal dggdlpgldf ahmyqvykpr rglkrsednk etyklphrli
       61 ekkrrdrine ciaqlkdllp ehlklttlgh lekavvlelt lkhvkaltnl ieqqqqkiia
      121 lqnglqagdl ssrnldssqe mfrsgfqmca kemlqylakh engkelkssq lvshlhrmas
      181 evlqggaark pgdippkmld lkekpaplga ageghgkncv pviqrtfahs sgeqsgsdtd
      241 tdsgyggele ksdskseqpy fkkdtdlkya vqerissikq etedppakrs rlespqdegp
      301 fgsdvmgsag gflgphahqp plclpfylip psataylpml ekcwypasvp vlypslpasa
      361 aaltgfmnpd kisppllmpq rlpspvpahs pidssallqa lkqipplnle tkd
//
LOCUS       XP_041319505             234 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121351428 [Pyrgilauda ruficollis].
ACCESSION   XP_041319505
VERSION     XP_041319505.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463571.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="uncharacterized protein LOC121351428"
                     /calculated_mol_wt=24220
     CDS             1..234
                     /gene="LOC121351428"
                     /coded_by="XM_041463571.1:32..736"
                     /db_xref="GeneID:121351428"
ORIGIN      
        1 megsftphds gsnkmfrkae fpqairgaaa llsappaglg vtgprqlvsk gicsylqrhe
       61 kqsrlgllap evkaqpcrgw tggmrsalgi lgrntpcfph qgeflrepgc lwqswergsl
      121 ptepgssaaa aparaggsag gqrlhprgac alqsavsvac slpelpgelh isfpsrsvrg
      181 ggertalsrg rspgtprelr rgarssltpt glcpsllgva karsgvkpgg fsrv
//
LOCUS       XP_041319516             185 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4E type 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319516
VERSION     XP_041319516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="eukaryotic translation initiation factor 4E type
                     3"
                     /calculated_mol_wt=20802
     Region          14..164
                     /region_name="IF4E"
                     /note="Eukaryotic initiation factor 4E; pfam01652"
                     /db_xref="CDD:460281"
     CDS             1..185
                     /gene="EIF4E3"
                     /coded_by="XM_041463582.1:1..558"
                     /db_xref="GeneID:121351439"
ORIGIN      
        1 malspperda pglplhspwt fwldkslpgt taaecalnlk kiytvqtvqd fwsvynnipp
       61 vtnlplrcsy hlmrgerrpl weeesnakgg iwkmkvpkes taavwkelll atigeqftdc
      121 caaddevigv svsvrdrqdv vqvwnmnsss aseakvleki hkllphtsfk avfykshreh
      181 hafeg
//
LOCUS       XP_041319527             309 aa            linear   VRT 06-MAY-2021
DEFINITION  deoxyribonuclease gamma [Pyrgilauda ruficollis].
ACCESSION   XP_041319527
VERSION     XP_041319527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463593.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..309
                     /product="deoxyribonuclease gamma"
                     /calculated_mol_wt=36117
     Region          21..281
                     /region_name="DNase1"
                     /note="Deoxyribonuclease 1; cd10282"
                     /db_xref="CDD:197337"
     Site            order(26..27,29,33,58,60..62,97..98,100,132,155,158,189,
                     191,196,229,233..234,273..274)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197337"
     Site            order(26,58,100,155,189,191,234,273..274)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197337"
     Site            order(26,58,273)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(28,155,189,191,274)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197337"
     Site            28
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:197337"
     Site            order(29,33,60..62,97..98,100,132,155,158,189,191,196,233,
                     274)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197337"
     Site            order(121,133)
                     /site_type="other"
                     /note="Ca binding site II [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(189,234,274)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(193,219)
                     /site_type="metal-binding"
                     /note="metal binding site III [ion binding]"
                     /db_xref="CDD:197337"
     Site            order(222,224)
                     /site_type="other"
                     /note="Ca binding site I [ion binding]"
                     /db_xref="CDD:197337"
     CDS             1..309
                     /gene="DNASE1L3"
                     /coded_by="XM_041463593.1:51..980"
                     /db_xref="GeneID:121351450"
ORIGIN      
        1 mkmllfflls lfyfnpslsl kicsfnvrsf getkiarpev idavvkivsr cdimllmeik
       61 dsknrvcpll vekltsqvkg pkeeyrcmas erlgrnsyke qyafiyrqdq vsvkqtyqyp
      121 dtqpgdedvf srepfviwwq spktavsefa viplhttpdt avreidelyd vyldvkqrwk
      181 tenfvfmgdf nagcsyvpqk qwknirlrty seflwligdk ndttvknstr csydrivvsg
      241 qkliqavvph sanifdfqee fqmteeqalg vsdhfpvefe lkakggffnw lrskfsrkrr
      301 pkksrslrs
//
LOCUS       XP_041319538             390 aa            linear   VRT 06-MAY-2021
DEFINITION  oxytocin receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041319538
VERSION     XP_041319538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463604.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..390
                     /product="oxytocin receptor"
                     /calculated_mol_wt=44157
     Region          47..343
                     /region_name="7tmA_OT_R"
                     /note="oxytocin receptor, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15387"
                     /db_xref="CDD:320509"
     Region          48..74
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320509"
     Region          81..108
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320509"
     Site            order(104,107..108,119..124,126..127,130,172,174..178,204,
                     207..209,211..213,215..216,291,294..295,297..298,301,
                     310..311,313..315,318,321..322)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320509"
     Region          119..149
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320509"
     Region          159..180
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320509"
     Region          204..233
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320509"
     Region          271..301
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320509"
     Region          311..336
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320509"
     CDS             1..390
                     /gene="OXTR"
                     /coded_by="XM_041463604.1:241..1413"
                     /db_xref="GeneID:121351458"
ORIGIN      
        1 meklylagss twiinsslgn gslrlenlsa grnsttdplk rnedmakvev tvlclilfla
       61 ltgnlcvlla ihttrhkhsr myffmkhlsi adlvvaifqv lpqliwditf rfygpdflcr
      121 likylqvvgm fastymlllm sldrclaicq plrslhrrad rvsvlltwll cllvsipqih
      181 ifslrdvgng vydcwadfiq pwgpkayvtw itlmvyiipv lmlsicygli sfkiwqnvkl
      241 ktahgpsvgl gsgsrsgtvf arvsstklis kakirtvkmt fiivlafivc wtpfffvqmw
      301 svwdtnapqe aspfiiamll aslnsccnpw iymlytghlf hdlmrrflcc sarylksrpa
      361 celsrksnss sfvlscrgts qrsfvqpptp
//
LOCUS       XP_041319549             348 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and cysteine-rich domains protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319549
VERSION     XP_041319549.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463615.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..348
                     /product="LIM and cysteine-rich domains protein 1"
                     /calculated_mol_wt=38299
     Region          102..188
                     /region_name="PET_testin"
                     /note="The PET domain of Testin; cd09829"
                     /db_xref="CDD:193604"
     Region          227..284
                     /region_name="LIM1_Testin_like"
                     /note="The first LIM domain of Testin-like family;
                     cd09340"
                     /db_xref="CDD:188726"
     Site            order(227,230,253,256,259,262,280,283)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188726"
     Region          290..343
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(292,295,313,316,319,322,340,343)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     CDS             1..348
                     /gene="LMCD1"
                     /coded_by="XM_041463615.1:46..1092"
                     /db_xref="GeneID:121351469"
ORIGIN      
        1 msgsqpqggr gvpclrcrgl cagfephswr kicksckcsq eehglsseld ddckigrlla
       61 gskyatltar lkggdgariy krnrmivtnp nisgkdptfd tityewappg ltqklamqym
      121 elvpkelqpv agtdgalqrr rrlarqlplh dqdpaqcrgl aegeqqlmhe fvkrykaeal
      181 gvgevalpgq ggggkeeekp qeksidpgra pespngales taghyrceac qqpvpgdcpv
      241 vyaeragycr qwhpacfvcc rcreplvdli yfwksgaawc grhyceslrp rcagcdeiif
      301 sedyqqvegl awhnkhfacl ecetlltgkp falanasllc ttcsqsra
//
LOCUS       XP_041319563             624 aa            linear   VRT 06-MAY-2021
DEFINITION  actin-related protein 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041319563
VERSION     XP_041319563.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463629.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="actin-related protein 8"
                     /calculated_mol_wt=70343
     Region          47..619
                     /region_name="ASKHA_NBD_Arp8-like"
                     /note="nucleotide-binding domain (NBD) of the
                     actin-related protein 8 (Arp8)-like subfamily; cd10206"
                     /db_xref="CDD:466812"
     CDS             1..624
                     /gene="ACTR8"
                     /coded_by="XM_041463629.1:141..2015"
                     /db_xref="GeneID:121351476"
ORIGIN      
        1 mtqaekgeae ngkdkerdre reqrgvkrpi vpaavpeslq eqiqsnfivv ihpgsttlrl
       61 gratdtlpag iphviarrhk qpgqaayrds wllrdglnkp esteqrqngl kmvdqaiwsk
      121 kmsngarrip vspdqarsyn rqmrpaildh ssgakwtnts nhpeflvgee alyvnplday
      181 nihwpirrgq lnlhsgpggs ltavladlev iwshaiqkyl eiplkdlkyy rcillipdiy
      241 nkqhvkelvn milmkmgfsg iivhqesvca tfgsglssac ivdvgdqkts vccvedgvsh
      301 rntrlclayg gsdvsrcfyw lmqragfpyr dcqltnkldc lllqhlketf chldqdisgl
      361 qdhefqirhp dspallyqfr lgdeklqapm alfypatfgi vgqkmtilqh rsqgdpedph
      421 dehyllatqs kqeqsakata drksmskpga fegelrgqss disermypqe velgssqgdc
      481 mipgndseep lsahmsrkta isqfegkalg ldkailhsid ccasddtkkk myssilvvgg
      541 glmfhkaqef lqhrilnkmp psfrrvvenv evitrpkdmd prliawkgga vlacldttqe
      601 lwiyqrewqr fgvrmlrera afvw
//
LOCUS       XP_041319591              95 aa            linear   VRT 06-MAY-2021
DEFINITION  selenoprotein K isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319591
VERSION     XP_041319591.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463657.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..95
                     /product="selenoprotein K isoform X1"
                     /calculated_mol_wt=10503
     Region          2..89
                     /region_name="SelK_SelG"
                     /note="Selenoprotein SelK_SelG; pfam10961"
                     /db_xref="CDD:463198"
     CDS             1..95
                     /gene="SELENOK"
                     /coded_by="XM_041463657.1:131..418"
                     /db_xref="GeneID:121351492"
ORIGIN      
        1 mvyisngqvl dnqsrapwrl ssitdffwsi adfvvlffqs iiqpdlrrrg ytsssysgyh
       61 dgrgppanpr rrmgrinhwg ggpspppmag ggugr
//
LOCUS       XP_041319600              92 aa            linear   VRT 06-MAY-2021
DEFINITION  selenoprotein K isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319600
VERSION     XP_041319600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..92
                     /product="selenoprotein K isoform X2"
                     /calculated_mol_wt=10139
     Region          2..91
                     /region_name="SelK_SelG"
                     /note="Selenoprotein SelK_SelG; pfam10961"
                     /db_xref="CDD:463198"
     CDS             1..92
                     /gene="SELENOK"
                     /coded_by="XM_041463666.1:131..409"
                     /db_xref="GeneID:121351492"
ORIGIN      
        1 mvyisngqvl dnqsrapwrl ssitdffwsi adfvvlffqs iiqpdlrrrg ytsssysgyh
       61 dgrgppanpr rrmgrinhwg ggpspppmag gg
//
LOCUS       XP_041319612             596 aa            linear   VRT 06-MAY-2021
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319612
VERSION     XP_041319612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 1"
                     /calculated_mol_wt=66872
     Region          23..446
                     /region_name="Ribophorin_I"
                     /note="Ribophorin I; pfam04597"
                     /db_xref="CDD:428028"
     CDS             1..596
                     /gene="RPN1"
                     /coded_by="XM_041463678.1:103..1893"
                     /db_xref="GeneID:121351506"
ORIGIN      
        1 magllcrlll lclaaagasa dlvleevrrs ldlsthlaki saelslanap ggaaastfll
       61 alepgleprl ahlgvqvkge eeeenalevk etkvkgksgk ffsvklpspl apgakvrvsv
      121 emvfthvlqp ypthitqsek qfvvfegnhy fyspyvtktq ttrvklasrn vesytklgnp
      181 srtedmieyg pfkdipaysq dtlkvhyenn spfltitsmt rvievshwgn iaveetvdlk
      241 htgavlkgpf srydyqrqpd sgissvksfk tilpaaaqdv yyrdeignis tshllvldds
      301 vemeirprfp lfggwkthyi igynlpsyey lynlgdqyal kmrfvdhvfd eqvtdsltvk
      361 ivlpegakni hvdspyeinr asdelhytyl dtfgrpviva hksnlveqhi qdivvhytfn
      421 kilmlqepll vvgafyilff tvivyvrldf sitkdpaaea rmkvaciteq vltlvnkrlg
      481 lyrhfdeavn kykqsrdist lnsgkkslem ehkaltseia slqsklkteg sdlcdkvsei
      541 qkldgqvkel vlkssveaer lvagklkkdt yienekmhsn krqdlvskid nildal
//
LOCUS       XP_041319620             596 aa            linear   VRT 06-MAY-2021
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319620
VERSION     XP_041319620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit 1"
                     /calculated_mol_wt=66872
     Region          23..446
                     /region_name="Ribophorin_I"
                     /note="Ribophorin I; pfam04597"
                     /db_xref="CDD:428028"
     CDS             1..596
                     /gene="RPN1"
                     /coded_by="XM_041463686.1:103..1893"
                     /db_xref="GeneID:121351506"
ORIGIN      
        1 magllcrlll lclaaagasa dlvleevrrs ldlsthlaki saelslanap ggaaastfll
       61 alepgleprl ahlgvqvkge eeeenalevk etkvkgksgk ffsvklpspl apgakvrvsv
      121 emvfthvlqp ypthitqsek qfvvfegnhy fyspyvtktq ttrvklasrn vesytklgnp
      181 srtedmieyg pfkdipaysq dtlkvhyenn spfltitsmt rvievshwgn iaveetvdlk
      241 htgavlkgpf srydyqrqpd sgissvksfk tilpaaaqdv yyrdeignis tshllvldds
      301 vemeirprfp lfggwkthyi igynlpsyey lynlgdqyal kmrfvdhvfd eqvtdsltvk
      361 ivlpegakni hvdspyeinr asdelhytyl dtfgrpviva hksnlveqhi qdivvhytfn
      421 kilmlqepll vvgafyilff tvivyvrldf sitkdpaaea rmkvaciteq vltlvnkrlg
      481 lyrhfdeavn kykqsrdist lnsgkkslem ehkaltseia slqsklkteg sdlcdkvsei
      541 qkldgqvkel vlkssveaer lvagklkkdt yienekmhsn krqdlvskid nildal
//
LOCUS       XP_041319632             601 aa            linear   VRT 06-MAY-2021
DEFINITION  EGF domain-specific O-linked N-acetylglucosamine transferase
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319632
VERSION     XP_041319632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="EGF domain-specific O-linked N-acetylglucosamine
                     transferase isoform X1"
                     /calculated_mol_wt=69959
     Region          409..516
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; pfam04577"
                     /db_xref="CDD:428020"
     CDS             1..601
                     /gene="EOGT"
                     /coded_by="XM_041463698.1:20..1825"
                     /db_xref="GeneID:121351521"
ORIGIN      
        1 mrgemrfcag arrrcrvqaw vrhqvrlvpg sgsgsimeps tawhrmpgtf prflylgklk
       61 wflsnqtvqn sqvamfmllv fglllqeila nsqaenptef pnipeepfys ykainlpdeh
      121 ipyflhnnqh vadickqdal cpykkhlkkl kscwgyeksc rsenrfsypv cdyvetgwas
      181 dietaqqifw kqadfgyvre rlsevkthck paatgdsslt csqylqhcra tnlyidlrav
      241 krnhdrfked ffqkgeiggh ctldvqafla egqrksplqs wfaelqtfta ldfrpledgk
      301 cdiviekpty fmkldagvnm yhhfcdfvnl yitqhinnsf stdvnivmwd tssygygdlf
      361 setwkaftdy eiihlktfds krvcfkeavf sllprmrygl fyntplisgc hgtglfrafs
      421 qhvlhrlnit qegpkdgkir vtilarstdy rkilnqnelv salktvstle vkvvdykyke
      481 lefseqlrit hnsdifigih gaglthllfl pdwavvfely ncedercyld larlrgihyi
      541 twrkrnkvfp qdqghhptlg ehpkftnysf dveefmylvl laanhvsqhs kwpfrvkhde
      601 f
//
LOCUS       XP_041319642             527 aa            linear   VRT 06-MAY-2021
DEFINITION  EGF domain-specific O-linked N-acetylglucosamine transferase
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319642
VERSION     XP_041319642.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463708.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..527
                     /product="EGF domain-specific O-linked N-acetylglucosamine
                     transferase isoform X2"
                     /calculated_mol_wt=61455
     Region          335..442
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; pfam04577"
                     /db_xref="CDD:428020"
     CDS             1..527
                     /gene="EOGT"
                     /coded_by="XM_041463708.1:483..2066"
                     /db_xref="GeneID:121351521"
ORIGIN      
        1 mfmllvfgll lqeilansqa enptefpnip eepfysykai nlpdehipyf lhnnqhvadi
       61 ckqdalcpyk khlkklkscw gyekscrsen rfsypvcdyv etgwasdiet aqqifwkqad
      121 fgyvrerlse vkthckpaat gdssltcsqy lqhcratnly idlravkrnh drfkedffqk
      181 geigghctld vqaflaegqr ksplqswfae lqtftaldfr pledgkcdiv iekptyfmkl
      241 dagvnmyhhf cdfvnlyitq hinnsfstdv nivmwdtssy gygdlfsetw kaftdyeiih
      301 lktfdskrvc fkeavfsllp rmryglfynt plisgchgtg lfrafsqhvl hrlnitqegp
      361 kdgkirvtil arstdyrkil nqnelvsalk tvstlevkvv dykykelefs eqlrithnsd
      421 ifigihgagl thllflpdwa vvfelynced ercyldlarl rgihyitwrk rnkvfpqdqg
      481 hhptlgehpk ftnysfdvee fmylvllaan hvsqhskwpf rvkhdef
//
LOCUS       XP_041319652             527 aa            linear   VRT 06-MAY-2021
DEFINITION  EGF domain-specific O-linked N-acetylglucosamine transferase
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319652
VERSION     XP_041319652.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463718.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..527
                     /product="EGF domain-specific O-linked N-acetylglucosamine
                     transferase isoform X2"
                     /calculated_mol_wt=61455
     Region          335..442
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; pfam04577"
                     /db_xref="CDD:428020"
     CDS             1..527
                     /gene="EOGT"
                     /coded_by="XM_041463718.1:489..2072"
                     /db_xref="GeneID:121351521"
ORIGIN      
        1 mfmllvfgll lqeilansqa enptefpnip eepfysykai nlpdehipyf lhnnqhvadi
       61 ckqdalcpyk khlkklkscw gyekscrsen rfsypvcdyv etgwasdiet aqqifwkqad
      121 fgyvrerlse vkthckpaat gdssltcsqy lqhcratnly idlravkrnh drfkedffqk
      181 geigghctld vqaflaegqr ksplqswfae lqtftaldfr pledgkcdiv iekptyfmkl
      241 dagvnmyhhf cdfvnlyitq hinnsfstdv nivmwdtssy gygdlfsetw kaftdyeiih
      301 lktfdskrvc fkeavfsllp rmryglfynt plisgchgtg lfrafsqhvl hrlnitqegp
      361 kdgkirvtil arstdyrkil nqnelvsalk tvstlevkvv dykykelefs eqlrithnsd
      421 ifigihgagl thllflpdwa vvfelynced ercyldlarl rgihyitwrk rnkvfpqdqg
      481 hhptlgehpk ftnysfdvee fmylvllaan hvsqhskwpf rvkhdef
//
LOCUS       XP_041319663             527 aa            linear   VRT 06-MAY-2021
DEFINITION  EGF domain-specific O-linked N-acetylglucosamine transferase
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319663
VERSION     XP_041319663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..527
                     /product="EGF domain-specific O-linked N-acetylglucosamine
                     transferase isoform X2"
                     /calculated_mol_wt=61455
     Region          335..442
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; pfam04577"
                     /db_xref="CDD:428020"
     CDS             1..527
                     /gene="EOGT"
                     /coded_by="XM_041463729.1:528..2111"
                     /db_xref="GeneID:121351521"
ORIGIN      
        1 mfmllvfgll lqeilansqa enptefpnip eepfysykai nlpdehipyf lhnnqhvadi
       61 ckqdalcpyk khlkklkscw gyekscrsen rfsypvcdyv etgwasdiet aqqifwkqad
      121 fgyvrerlse vkthckpaat gdssltcsqy lqhcratnly idlravkrnh drfkedffqk
      181 geigghctld vqaflaegqr ksplqswfae lqtftaldfr pledgkcdiv iekptyfmkl
      241 dagvnmyhhf cdfvnlyitq hinnsfstdv nivmwdtssy gygdlfsetw kaftdyeiih
      301 lktfdskrvc fkeavfsllp rmryglfynt plisgchgtg lfrafsqhvl hrlnitqegp
      361 kdgkirvtil arstdyrkil nqnelvsalk tvstlevkvv dykykelefs eqlrithnsd
      421 ifigihgagl thllflpdwa vvfelynced ercyldlarl rgihyitwrk rnkvfpqdqg
      481 hhptlgehpk ftnysfdvee fmylvllaan hvsqhskwpf rvkhdef
//
LOCUS       XP_041319677             419 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial potassium channel [Pyrgilauda ruficollis].
ACCESSION   XP_041319677
VERSION     XP_041319677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="mitochondrial potassium channel"
                     /calculated_mol_wt=47254
     Region          114..>393
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..419
                     /gene="CCDC51"
                     /coded_by="XM_041463743.1:1186..2445"
                     /db_xref="GeneID:121351531"
ORIGIN      
        1 mgpmkykssv ssvscglqyh hslmkwspkv nlhmvrtycp sapkrpeaks avemamgllh
       61 ritesgtlmg knslqkvsat crnwwdryee fvginevrea qgkvteaenv fmiargivre
      121 arenveaqqi klkeirdrld rvsrddtqyl elatlehrll qeekryraay lnaeeserek
      181 fslfsaavre shekertrae ktknwsiigs vlgavigvlg styvnrvrlq elkvlvleaq
      241 kgpvnlqeai keqasshylq qkdlndvied lknvlqttas kggkegallt retrndsiki
      301 dsllmplneq lnyikqvssc lgslqqqfns lqesitqvls elqsvklaiq srptervmpr
      361 psgegkgqaa avrdvilelc dterrletqi krssiystal tcamfaitlp vlyiilkgn
//
LOCUS       XP_041319686             419 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial potassium channel [Pyrgilauda ruficollis].
ACCESSION   XP_041319686
VERSION     XP_041319686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="mitochondrial potassium channel"
                     /calculated_mol_wt=47254
     Region          114..>393
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..419
                     /gene="CCDC51"
                     /coded_by="XM_041463752.1:810..2069"
                     /db_xref="GeneID:121351531"
ORIGIN      
        1 mgpmkykssv ssvscglqyh hslmkwspkv nlhmvrtycp sapkrpeaks avemamgllh
       61 ritesgtlmg knslqkvsat crnwwdryee fvginevrea qgkvteaenv fmiargivre
      121 arenveaqqi klkeirdrld rvsrddtqyl elatlehrll qeekryraay lnaeeserek
      181 fslfsaavre shekertrae ktknwsiigs vlgavigvlg styvnrvrlq elkvlvleaq
      241 kgpvnlqeai keqasshylq qkdlndvied lknvlqttas kggkegallt retrndsiki
      301 dsllmplneq lnyikqvssc lgslqqqfns lqesitqvls elqsvklaiq srptervmpr
      361 psgegkgqaa avrdvilelc dterrletqi krssiystal tcamfaitlp vlyiilkgn
//
LOCUS       XP_041319708             381 aa            linear   VRT 06-MAY-2021
DEFINITION  SRSF protein kinase 3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041319708
VERSION     XP_041319708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="SRSF protein kinase 3-like"
                     /calculated_mol_wt=42410
     Region          20..378
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(37..40,43,45,58,60,96,116..119,164,168..169,171,
                     221..222)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271038"
     CDS             1..381
                     /gene="LOC121351548"
                     /coded_by="XM_041463774.1:299..1444"
                     /db_xref="GeneID:121351548"
ORIGIN      
        1 meeqgqqemp saqctgghhp mqegevfntr yqvlhklgcg tfatvwlcqd mrrkkqvavk
       61 vlksregfad taqdevaflr cvscmkkkdl agenivslld dfrmigengf hsclvfevlg
      121 psirclmeny taqglplsfv kkslqqvlag lhflhkccri ihadikpeni llygrskglq
      181 rlltatldch qgtegrlkga ggdldnqlee sdlmsievki adlgsacwty kpfskeiqtq
      241 pyralevllg ldygtpadiw staclafema tgeclfdpqp gkyfsrdddh variiellgr
      301 ippqivfswn kstkffsrpg allrlsrlfp rslpgiladr hgwtpqeaaa faafllpalh
      361 yaperrasaa qslrhawiaa p
//
LOCUS       XP_041319722            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent calcium channel subunit alpha-2/delta-3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041319722
VERSION     XP_041319722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="voltage-dependent calcium channel subunit
                     alpha-2/delta-3"
                     /calculated_mol_wt=123669
     Region          112..228
                     /region_name="VWA_N"
                     /note="VWA N-terminal; pfam08399"
                     /db_xref="CDD:462464"
     Region          241..424
                     /region_name="vWA_VGCC_like"
                     /note="VWA Voltage gated Calcium channel like:
                     Voltage-gated calcium channels are a complex of five
                     proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The
                     alpha 2 and delta subunits result from proteolytic
                     processing of a single gene product and carries at...;
                     cd01463"
                     /db_xref="CDD:238740"
     Site            order(261,263,265,335,369)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238740"
     Region          <438..568
                     /region_name="dCache_1"
                     /note="Cache domain; pfam02743"
                     /db_xref="CDD:460673"
     Region          507..621
                     /region_name="PDC2_MCP_like"
                     /note="second PDC (PhoQ/DcuS/CitA) domain of
                     methyl-accepting chemotaxis proteins and similar domains;
                     cd12912"
                     /db_xref="CDD:350337"
     Region          654..1067
                     /region_name="VGCC_alpha2"
                     /note="Neuronal voltage-dependent calcium channel alpha
                     2acd; pfam08473"
                     /db_xref="CDD:462488"
     CDS             1..1090
                     /gene="CACNA2D3"
                     /coded_by="XM_041463788.1:1..3273"
                     /db_xref="GeneID:121351554"
ORIGIN      
        1 mpenlnllrg fggfffifwt alntalvdvv gseqqiplsv vklwasafgg eiksiaakys
       61 gsqllqkkyk eyekdvaiee idglqlvkkl aknmeemfhk kseavrrlve aaedaylkhe
      121 fdadlqyeyf navlinerde egnylelgke filvpndhfn nlpvnislsd vqvptnmynk
      181 dpaivngvyw seslnkvfvd nfdrdpsliw qyfgsakgff rqypgikwep dengviafdc
      241 rnrkwyiqaa tspkdvvilv dvsgsmkglr ltiakqtvss ildtlgdddf fniiayneel
      301 hyvepclngt lvqadranke hfrehldklf akgigmldia lneafnmlne fnhtgqgsic
      361 sqaimlitdg avdtydtifa kynwpdrkvr iftyligrea afadnlkwma cankgfftqi
      421 stladvqenv meylhvlsrp kvidqehdvv wteayidstl pqaqkladdq glvlmttvam
      481 pvfskqnetr skgillgvvg tdvpvkellk tipkyklgih gyafaitnng yilthpelrp
      541 lyeegkkrrk pnyssvdlse vewedrddvl rnamvnrktg kfsmevkktv dkgkrvlvmt
      601 ndyyytdikg tpfslgvals rghgkyffrg nvtveeglhd lehpdvslad ewsycntdlh
      661 pehrqmtqle aikryltgke pllqcdkeli qevlfdavvs apieaywtsl alnksensdk
      721 gvevaflgtr tglsrinlfv gpeqltnqdf ltaedkenif nadhfplwyr raaeqipgsf
      781 vysipfstet anksnvvtas taiqllddrk spvvaavgiq mkleffqrkf wtasrqcasl
      841 dgrcaiscdd etincylidn ngfilvsedy qqtgyffgev egavmnklla mgsfkritly
      901 dyqamcrtnk essdsahsll dpynaffaav kwimtelvlf lvefnlcsww hsdltakaqr
      961 lkqtlepcdt eypafvsert ikettgniac ddcfksfviq qipssnlfmv vvdnecfcds
     1021 ippitmapie iryneslkce rlksqkirrr peschgfhpe enarecggvs glsakpslvl
     1081 lplllmifsr
//
LOCUS       XP_041319733             634 aa            linear   VRT 06-MAY-2021
DEFINITION  5-aminolevulinate synthase, nonspecific, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319733
VERSION     XP_041319733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..634
                     /product="5-aminolevulinate synthase, nonspecific,
                     mitochondrial"
                     /calculated_mol_wt=69534
     Region          2..130
                     /region_name="Preseq_ALAS"
                     /note="5-aminolevulinate synthase presequence; pfam09029"
                     /db_xref="CDD:462658"
     Region          191..596
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(245,305..307,333,376,380..381,405,407..408,436,439,
                     565)
                     /site_type="active"
                     /note="substrate-cofactor binding pocket [active]"
                     /db_xref="CDD:99747"
     Site            order(305..307,333,376,380,405,407..408,436,439)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99747"
     Site            439
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99747"
     CDS             1..634
                     /gene="ALAS1"
                     /coded_by="XM_041463799.1:71..1975"
                     /db_xref="GeneID:121351560"
ORIGIN      
        1 meavvrrcpf larvsqaflq kagpslllya qhcprmmeaa ppaaralats aargqqaeee
       61 tpagrreakn vnvaqqnadg tqlpaghppa sasqstatkc pflaaqmnhk ksnvfckasl
      121 elqedvqevq adrkgtefak ipststvrki etegaeqsgl lekfkdimlk qkpesvshll
      181 qdnlpksvst fqydqffekk idekkkdhty rvfktvnrka qifpmaddys gslitkkevs
      241 vwcsndylgm srhprvcgav metlkqhgag aggtrnisgt skfhvdleke ladlhgkdaa
      301 llfsscfvan dstlftlakm lpgceiysds gnhasmiqgi cnsrvpkhif rhndvnhlre
      361 llkksdpstp kivafetvhs mdgavcplee lcdvahehga itfvdevhav glygargggi
      421 gdrdgvmhkm diisgtlgka fgcvggyiss tsslvdtvrs yaagfiftts lppmllagal
      481 esvrtlksae gqalrrqhqr nvklmrqmlm daglpvvhcp shiipirvad aaknteicdk
      541 lmsqhsiyvq ainyptvprg eellriaptp hhtpqmmsyf iekllatwkd vglelkphss
      601 aecnfcrrpl hfevmserer ayfsgmsklv svsa
//
LOCUS       XP_041319749             382 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity protein phosphatase 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041319749
VERSION     XP_041319749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="dual specificity protein phosphatase 7"
                     /calculated_mol_wt=42312
     Region          21..151
                     /region_name="DSP_MapKP"
                     /note="N-terminal regulatory rhodanese domain of dual
                     specificity phosphatases (DSP), such as Mapk Phosphatase.
                     This domain is believed to determine substrate specificity
                     by binding the substrate, such as ERK2, and activating the
                     C-terminal catalytic domain by...; cd01446"
                     /db_xref="CDD:238723"
     Site            67..69
                     /site_type="active"
                     /note="putative substrate binding residues [active]"
                     /db_xref="CDD:238723"
     Region          203..351
                     /region_name="DSP_DUSP7"
                     /note="dual specificity phosphatase domain of dual
                     specificity protein phosphatase 7; cd14643"
                     /db_xref="CDD:350491"
     CDS             1..382
                     /gene="DUSP7"
                     /coded_by="XM_041463815.1:211..1359"
                     /db_xref="GeneID:121351564"
ORIGIN      
        1 mktqvwgssp rapmaaampc ksaewlqeel esgggrslll ldcrphelfe sshietainl
       61 aipglmlrrl kkgnlpirsi ipnhedkerf vkrckadtvl lydeatadwq dsgaatsvlg
      121 lllqklrddg ckayylkggf nkfqteyseh cetnldsssp snsppasvlg lgglrissdc
      181 sdgesdreps satesdgspi pnnqpafpvq ilpylylgca kdstnldvlg kygikyilnv
      241 tpnlpnmfeh dgefkykqip isdhwsqnls qffpeaiafi dearskkcgi lvhclagisr
      301 svtvtvaylm qklnlslnda ydfvkrkksn ispnfnfmgq lldfertlgl nspcdnrsps
      361 eqlyfttptn hnlfqlntle st
//
LOCUS       XP_041319762            1060 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich transmembrane protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041319762
VERSION     XP_041319762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1060
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1060
                     /product="proline-rich transmembrane protein 3"
                     /calculated_mol_wt=108790
     Region          <100..535
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1060
                     /gene="PRRT3"
                     /coded_by="XM_041463828.1:1..3183"
                     /db_xref="GeneID:121351570"
ORIGIN      
        1 mgplgteiag nraqgypgrg sqatvslpgq wvaegtaasr saarvtwtsa adpgspdphs
       61 hrvdsvltma aaqlvtwgml latgvpakaq gvlpaglslg gdsshspawg qqwpgpsptw
      121 easgepssag aprserwgvk hpvhwspplq agdgtraple meitmtgadt kvwrdgstvp
      181 avteeplvaw rgheaevqds slshgsavgt pgpevptdrg adspeppwag qglslsrhsv
      241 sktvgtpspq ptisttaldp alaagmrtad ahtgghteae ghtvvpglsq dapltpassq
      301 svppgtapvs dptgtgpawg phaspgsvql vgswgdtggh psssptppss aprlhhtvps
      361 wglaepwtra lpshqrstrr apfshatssp gdagprndpg ttgqrgpqpv pgpvlstgpa
      421 pppasstatp gtpsrgllpe edvgspqqvr gavgavsvpn atkttpqpta hpttgtlgtr
      481 htdtpgtqtp asstatpsat wrragmtlqp aprdassppp qptvrappal ganatglrwa
      541 elqqqlglsw eahvygvaav flllalgcla glvgtailrp phllhvvgah glllaacllr
      601 atfllldpyg argrlpapal lllntapfpl llaafalllq rlqrlaqlql lpsrlrglpa
      661 lgaaaalqsa vmgaadllpp rpglaaalgl qalgcvagal lllgglwgcw rvlraplegp
      721 gprpgallaa avaglpvcgl qlfsavwlrg vlgphgrfsr pswaaqlwlr igelgtalal
      781 laaaaepvcc rcrrrspagh scwakalryf cagrkaeape ypnncydwag sstggtgaer
      841 tpandisknl irnpaeqlpl ralkdsnevw aagtgmpgls pkcpnmlaar scaafeqgss
      901 pslgelifrp pspidlrrsi dqalcrrhll hdglfgrarr gsgsslhgsp apdttpslgr
      961 mvrcssltel pgprqphgsi tvtvtasass ldssslkisw npwrhglssp dslpldeaps
     1021 rapllvpaga pgceregpra fpalgkavds rslssdtiel
//
LOCUS       XP_041319774             630 aa            linear   VRT 06-MAY-2021
DEFINITION  interactor of HORMAD1 protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319774
VERSION     XP_041319774.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463840.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..630
                     /product="interactor of HORMAD1 protein 1"
                     /calculated_mol_wt=69584
     Region          19..>276
                     /region_name="IHO1"
                     /note="Interactor of HORMAD1 protein 1; pfam15771"
                     /db_xref="CDD:464859"
     CDS             1..630
                     /gene="IHO1"
                     /coded_by="XM_041463840.1:1..1893"
                     /db_xref="GeneID:121351579"
ORIGIN      
        1 mnfnvwnike mlstptalgp nkfsmrssta sdysslsdsq llfgsqfcpe nvqsaaaple
       61 lgqqnsqdse psiftkyqtk pqlfdeetre kgslnfgpgr vksvlenfev nknkikdkyd
      121 revlssfifs ikdklqelpv ffekfeemfd sklksslvcl etlfktleda lqshcslvlk
      181 alteksqmeq allemerrla akdveildmk ssmqllqegl eslpaqlndq flkackelgf
      241 qkpcntsaeq htllssaslp phttdksfqt spglcqhcvl sdehlhrpcc pgrgvcscsg
      301 wshfpcvtvg qqhrdspgrn qvtgygtskg dlnpasgdka spiatamkcs letqscaahp
      361 cmcwagrhll gssqkkhcpv plegplptpl rkafrrgtrg fkpltpsqqq qpqvchhstq
      421 katpgqrhsn wstnheveka avgnktkqsp grmswkkair rkttystkgk gehsgcadsg
      481 lkqrkangii dlessrknsl hsylvdlnse nsdlvfaaph qqilssaqmg lkknfppvph
      541 sdkslqqlas rrkrsleikk tmnvssvkry lldsspeedv lslcsttgvk qmscfnlqsp
      601 ssskkphpvn plaqqktacc sllldcdssd
//
LOCUS       XP_041319789             716 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat neuronal protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319789
VERSION     XP_041319789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..716
                     /product="leucine-rich repeat neuronal protein 1"
                     /calculated_mol_wt=80725
     Region          32..75
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          54..73
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <72..328
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          74..96
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          97..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          145..168
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          169..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          193..216
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          217..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          241..264
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          265..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..313
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          312..373
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          314..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          339..362
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          363..375
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          371..418
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     Region          429..516
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..465
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          482..486
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          496..501
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          509..512
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          531..608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     CDS             1..716
                     /gene="LRRN1"
                     /coded_by="XM_041463855.1:229..2379"
                     /db_xref="GeneID:121351582"
ORIGIN      
        1 makvrvvltv cqlvlellmn sltessiqss ecpqlcvcei rpwftpqsty reattvdcnd
       61 lrltkipsnl ssdtqvlllq snniakttde lqqlfnltel dfsqnnftsi rdvglsnltq
      121 lttlhleenq itemtdyclq dlcnlqelyi nhnqissisa nafsglknll rlhlnsnklk
      181 vidsrwfdst pnleilmige npvigildmn fkplsnlrsl vlagmyltdi pgnalvglds
      241 leslsfydnk lvkvpqlale kvpnlkfldl nknpihkiqe gdfknmlrlk elginnmgel
      301 vsvdryaldn lpeltkleat nnpklsyihr lafrnvpale slmlnnnaln avyqktvesl
      361 pnlreisihs nplrcdcvih winsnktnir fmeplsmfca mppeyrgqqv kevliqdsne
      421 qclpmishet fpnhlnldig mtvlldcram aepepeiywv tplgnkvtve slsdkyklss
      481 egtleisniq vedsgrytcv aqniegadtr vatirvngtl ldgtqvlkiy vkqaeshsil
      541 vswkvnsnvm tsnlkwssat mkidnphity tarvpvdvhe ynlthlqpst dyevcltvsn
      601 ihqqtqrscv nvttknaafa ldisdqetst alaavmgsmf avislasvsv yiakrfkrkn
      661 yhhslkkymq ktssiplnel ypplinlweg dsekdkdgsa etkptqvdts rsyymw
//
LOCUS       XP_041319801             583 aa            linear   VRT 06-MAY-2021
DEFINITION  mRNA-decapping enzyme 1A [Pyrgilauda ruficollis].
ACCESSION   XP_041319801
VERSION     XP_041319801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..583
                     /product="mRNA-decapping enzyme 1A"
                     /calculated_mol_wt=64045
     Region          6..126
                     /region_name="Dcp1"
                     /note="mRNA decapping enzyme 1 (Dcp1); cd09804"
                     /db_xref="CDD:197362"
     Site            order(7..8,12,14..15,18..19,29,31,53,70..72,75,77)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:197362"
     Region          <182..>512
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          540..582
                     /region_name="mRNA_decap_C"
                     /note="mRNA-decapping enzyme C-terminus; pfam16741"
                     /db_xref="CDD:465253"
     CDS             1..583
                     /gene="DCP1A"
                     /coded_by="XM_041463867.1:139..1890"
                     /db_xref="GeneID:121351589"
ORIGIN      
        1 meaagragqe mslaalrrhd pfitgiadvt gqvalysfsp kdnewektdi egtlfvykrs
       61 aspyhgftiv nrlnmhnlve pvnkdlefql hepfllyrna slsiysiwfy dkndchriak
      121 lmakvveqea qrsqqvsqdr kspsrtngcn enrpidilem lskakdeyer nqisdlsivs
      181 ssgmqqnsnp pkpestepse pkpslqvqeq pfqsrqkhlt leelfgtsvq keqpaapypt
      241 permeklqte asareqhsll lpfsfdqspv mqqslgkces psvkpsasqq dcltpmiipp
      301 asvsqpdlkn assysvrlsp vlnsastmea apaqmlpglk qsnsimqvmq qaakpisplv
      361 nqppsevnha pqnlmagqsq liapltaant gtvsnashts vdllqklrlt pqhdqtqqqs
      421 ltkspltpni sasvgqlatp esfkeshskp salnskiisp lqnvqqnkea evfpqpktls
      481 kasqvappqf vtatttvtps vllspsvfqq satkvteven kasssspltl gtteiqttpp
      541 tvlsrsqlqe alihliknds rflstihevy lqvltkstdn ikl
//
LOCUS       XP_041319813             498 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041319813
VERSION     XP_041319813.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463879.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="monocarboxylate transporter 2-like"
                     /calculated_mol_wt=54453
     Region          1..440
                     /region_name="2A0113"
                     /note="monocarboxylate transporter 1; TIGR00892"
                     /db_xref="CDD:273325"
     CDS             1..498
                     /gene="LOC121351595"
                     /coded_by="XM_041463879.1:78..1574"
                     /db_xref="GeneID:121351595"
ORIGIN      
        1 mpaeagrapg ppdggwgwvv vfgafvsigf ayafpkglai ffkeiqdffg tsyseiawvs
       61 simlattyga gpissilvnr ygsrpvvmfg gllcgvgmis aafctsilql yicvgfitgf
      121 glalnlqpsv iiigkyflkr rpianglama gspvmlctla plnqflfdnf gwrgsflilg
      181 aillnccvag alfrpigagt alvktqvtee gkdalkekit edgpmenkte eegekdcfek
      241 vnqyldfslf khrgfliyli gnvlmflgff apivflapya khtgideysa afllsilaiv
      301 dmvarpttgi vanskwvrpr iqyffsfaia fngachllcp lassytgliv yssffglafg
      361 mvcamlfetl mdlvgaarft savglvtiae cctillgppi gvilidtfgd ykymfikcgs
      421 vmvlagtflf imnyynyrml akeekerkar eedpksvrte nedkkiwnkd siqdgpemep
      481 lrekgeglkk elngtnev
//
LOCUS       XP_041319825             516 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protein transport protein Sec61 subunit alpha
            [Pyrgilauda ruficollis].
ACCESSION   XP_041319825
VERSION     XP_041319825.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463891.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..516
                     /product="LOW QUALITY PROTEIN: protein transport protein
                     Sec61 subunit alpha"
                     /calculated_mol_wt=56263
     Region          39..511
                     /region_name="PTZ00219"
                     /note="Sec61 alpha subunit; Provisional"
                     /db_xref="CDD:185519"
     CDS             1..516
                     /gene="SEC61A1"
                     /coded_by="XM_041463891.1:1..1551"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121351599"
ORIGIN      
        1 mrgggggrga wqeaegggra rsltcpcrra aarccsagaa mgikflevik pfcvilpeiq
       61 kperkiqfke kvlwtaitlf iflvccqipl fgimssdsad pfywmrvila snrattkkin
      121 svsaetkilc kkvisvslia hxhkypgqih tfsfysvvfg miitigqsiv yvmtgmygdp
      181 semgagicll itiqlfvagl ivllldellq kgyglgsgis lfiatnicet ivwkafsptt
      241 vntgrgmefe gaiialfhll atrtdkvral reafyrqnlp nlmnliatif vfaiviyfqg
      301 frvdlpiksa ryrgqyntyp iklfytsnip iilqsalvsn lyvisqmlsa rfsgnllvsl
      361 lgtwsdtssg gparaypvgg lcyylsppes fssvledpvh avvyivfmlg scaffsktwi
      421 evsgssakdv akqlkeqqmv mrghretsmv helnryipta aafgglciga lsvladflga
      481 igsgtgilla vtiiyqyfei fvkeqsevgs mgallf
//
LOCUS       XP_041319838             717 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319838
VERSION     XP_041319838.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463904.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..717
                     /product="ubiquitin carboxyl-terminal hydrolase BAP1
                     isoform X1"
                     /calculated_mol_wt=79503
     Region          5..233
                     /region_name="Peptidase_C12_UCH37_BAP1"
                     /note="Cysteine peptidase C12 containing ubiquitin
                     carboxyl-terminal hydrolase (UCH) families UCH37 (UCH-L5)
                     and BAP1; cd09617"
                     /db_xref="CDD:187738"
     Site            order(85,91,169,184)
                     /site_type="other"
                     /note="cancer-causing mutation sites"
                     /db_xref="CDD:187738"
     Site            order(85,91,169,184)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:187738"
     Region          <230..354
                     /region_name="MCPVI"
                     /note="Minor capsid protein VI; pfam02993"
                     /db_xref="CDD:367287"
     Region          631..676
                     /region_name="UCH_C"
                     /note="Ubiquitin carboxyl-terminal hydrolases; pfam18031"
                     /db_xref="CDD:465622"
     CDS             1..717
                     /gene="BAP1"
                     /coded_by="XM_041463904.1:46..2199"
                     /db_xref="GeneID:121351605"
ORIGIN      
        1 mnkgwleles dpglftllve dfgvkgvqve eiydlqskcq gpvygfiflf kwieerrsrr
       61 kvstlvdets vidddivnnm ffahqlipns cathallsvl lncnnvdlgp tlsrmkdftk
      121 gfspeskgya ignapelaka hnsharpepr hlpekqngis avrtmeafhf vsyvpikgrl
      181 feldglkvyp idhgpwadde ewtdkarrvi meriglatag epyhdirfnl mavvpdrrmk
      241 yesklhilkm nrqtvlealq qlirvtqpel iqtqksqesq paeeakpass ktitpesthp
      301 dgtdeptsqg hptatqspps kskpvpktaa sgingappan pnpivqrlpa fldnhnyaks
      361 pmqeeedlaa gvgrnrvpvr qhqqysdded dyddddeeev rntnsairyk rkgqvkqehv
      421 agaadgqlsv lqpntinvla eklkesqkdl siplsiktsg ggaavavvth sqpsptpsne
      481 stdtaseigs afnsplrspi rsanptrpss pvtshiskvl fgeedgllrv dcmrynravr
      541 dlgpivssgl lhltedgvfc plaaadgkns pssikpgeea pvaikleeke gseasdskek
      601 vglgrtsdhp ggekyspkel lallkcveae ianyeaclke evekrkkfki ddqrrthnyd
      661 efictfisml aqegmlaslv eqnisvrrrq gvsigrlhkq rkpdrrkrsr pykakrq
//
LOCUS       XP_041319847             699 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase BAP1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319847
VERSION     XP_041319847.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463913.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..699
                     /product="ubiquitin carboxyl-terminal hydrolase BAP1
                     isoform X2"
                     /calculated_mol_wt=77636
     Region          5..233
                     /region_name="Peptidase_C12_UCH37_BAP1"
                     /note="Cysteine peptidase C12 containing ubiquitin
                     carboxyl-terminal hydrolase (UCH) families UCH37 (UCH-L5)
                     and BAP1; cd09617"
                     /db_xref="CDD:187738"
     Site            order(85,91,169,184)
                     /site_type="other"
                     /note="cancer-causing mutation sites"
                     /db_xref="CDD:187738"
     Site            order(85,91,169,184)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:187738"
     Region          <230..354
                     /region_name="MCPVI"
                     /note="Minor capsid protein VI; pfam02993"
                     /db_xref="CDD:367287"
     Region          613..658
                     /region_name="UCH_C"
                     /note="Ubiquitin carboxyl-terminal hydrolases; pfam18031"
                     /db_xref="CDD:465622"
     CDS             1..699
                     /gene="BAP1"
                     /coded_by="XM_041463913.1:46..2145"
                     /db_xref="GeneID:121351605"
ORIGIN      
        1 mnkgwleles dpglftllve dfgvkgvqve eiydlqskcq gpvygfiflf kwieerrsrr
       61 kvstlvdets vidddivnnm ffahqlipns cathallsvl lncnnvdlgp tlsrmkdftk
      121 gfspeskgya ignapelaka hnsharpepr hlpekqngis avrtmeafhf vsyvpikgrl
      181 feldglkvyp idhgpwadde ewtdkarrvi meriglatag epyhdirfnl mavvpdrrmk
      241 yesklhilkm nrqtvlealq qlirvtqpel iqtqksqesq paeeakpass ktitpesthp
      301 dgtdeptsqg hptatqspps kskpvpktaa sgingappan pnpivqrlpa fldnhnyaks
      361 pmqeeedlaa gvgrnrvpvr qhqqysdded dyddddeeev rntnsairyk rkgqvkqehv
      421 agaadgqlsv lqpntinvla eklkesqkdl siplsiktsg ggaavavvth sqpsptpsne
      481 stdtaseigs afnsplrspi rsanptrpss pvtshiskvl fgeedgllrv dcmrynravr
      541 dlgpivssgl lhltedgvfc plaaadgkns pssikpgeea pvaikleeke gseasdskek
      601 ellallkcve aeianyeacl keevekrkkf kiddqrrthn ydefictfis mlaqegmlas
      661 lveqnisvrr rqgvsigrlh kqrkpdrrkr srpykakrq
//
LOCUS       XP_041319855             677 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase BAP1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319855
VERSION     XP_041319855.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463921.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..677
                     /product="ubiquitin carboxyl-terminal hydrolase BAP1
                     isoform X3"
                     /calculated_mol_wt=75203
     Region          5..193
                     /region_name="Peptidase_C12_UCH37_BAP1"
                     /note="Cysteine peptidase C12 containing ubiquitin
                     carboxyl-terminal hydrolase (UCH) families UCH37 (UCH-L5)
                     and BAP1; cd09617"
                     /db_xref="CDD:187738"
     Region          <190..314
                     /region_name="MCPVI"
                     /note="Minor capsid protein VI; pfam02993"
                     /db_xref="CDD:367287"
     Region          591..636
                     /region_name="UCH_C"
                     /note="Ubiquitin carboxyl-terminal hydrolases; pfam18031"
                     /db_xref="CDD:465622"
     CDS             1..677
                     /gene="BAP1"
                     /coded_by="XM_041463921.1:46..2079"
                     /db_xref="GeneID:121351605"
ORIGIN      
        1 mnkgwleles dpglftllve dfgvkgvqve eiydlqskcq gpvygfiflf kwieerrsrr
       61 kvstlvdets vidddivnnm ffahqskgya ignapelaka hnsharpepr hlpekqngis
      121 avrtmeafhf vsyvpikgrl feldglkvyp idhgpwadde ewtdkarrvi meriglatag
      181 epyhdirfnl mavvpdrrmk yesklhilkm nrqtvlealq qlirvtqpel iqtqksqesq
      241 paeeakpass ktitpesthp dgtdeptsqg hptatqspps kskpvpktaa sgingappan
      301 pnpivqrlpa fldnhnyaks pmqeeedlaa gvgrnrvpvr qhqqysdded dyddddeeev
      361 rntnsairyk rkgqvkqehv agaadgqlsv lqpntinvla eklkesqkdl siplsiktsg
      421 ggaavavvth sqpsptpsne stdtaseigs afnsplrspi rsanptrpss pvtshiskvl
      481 fgeedgllrv dcmrynravr dlgpivssgl lhltedgvfc plaaadgkns pssikpgeea
      541 pvaikleeke gseasdskek vglgrtsdhp ggekyspkel lallkcveae ianyeaclke
      601 evekrkkfki ddqrrthnyd efictfisml aqegmlaslv eqnisvrrrq gvsigrlhkq
      661 rkpdrrkrsr pykakrq
//
LOCUS       XP_041319868             156 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C3orf18 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041319868
VERSION     XP_041319868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="uncharacterized protein C3orf18 homolog"
                     /calculated_mol_wt=16849
     CDS             1..156
                     /gene="CUNH3orf18"
                     /coded_by="XM_041463934.1:156..626"
                     /db_xref="GeneID:121351623"
ORIGIN      
        1 msysspsvhd lhhstpttak phpgtaldvt vpqtttispe ttslnstkip dmastgpgms
       61 tmllsfgiit viglavamvl yirkrkrlek lrhqlmpmyn fdpteeqdel eqellehgrd
      121 aasaqasqsk vllpsqgalq rpsrlvftdv anaina
//
LOCUS       XP_041319880             337 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041319880
VERSION     XP_041319880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463946.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="monoacylglycerol lipase ABHD6"
                     /calculated_mol_wt=38311
     Region          51..325
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..337
                     /gene="ABHD6"
                     /coded_by="XM_041463946.1:657..1670"
                     /db_xref="GeneID:121351632"
ORIGIN      
        1 mdldmlnmfv iaggtlaipi lafvasfllw psaliriyyw ywrralgmqv ryanyddyqf
       61 cysyrgrpgy rpsilmlhgf sahkdmwlsi vkflpknlhl vcvdmpgheg ttrsdlddys
      121 isgqakrihq fveciklnrk pfhlvgtsmg gnvagvyaaq ypedicsltl icpaglpstt
      181 eskfikqlre qqeskcmdri plipstpeem admlklcsyv rfkvpqqilq glvdvriphn
      241 efyrklflei vdeksrhslh enmskikapt qviwgkqdqv ldvsgasvla saipdchvyi
      301 lencghsvvv erprktanli leflallhsi dnnkkqa
//
LOCUS       XP_041319887             337 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041319887
VERSION     XP_041319887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="monoacylglycerol lipase ABHD6"
                     /calculated_mol_wt=38311
     Region          51..325
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..337
                     /gene="ABHD6"
                     /coded_by="XM_041463953.1:204..1217"
                     /db_xref="GeneID:121351632"
ORIGIN      
        1 mdldmlnmfv iaggtlaipi lafvasfllw psaliriyyw ywrralgmqv ryanyddyqf
       61 cysyrgrpgy rpsilmlhgf sahkdmwlsi vkflpknlhl vcvdmpgheg ttrsdlddys
      121 isgqakrihq fveciklnrk pfhlvgtsmg gnvagvyaaq ypedicsltl icpaglpstt
      181 eskfikqlre qqeskcmdri plipstpeem admlklcsyv rfkvpqqilq glvdvriphn
      241 efyrklflei vdeksrhslh enmskikapt qviwgkqdqv ldvsgasvla saipdchvyi
      301 lencghsvvv erprktanli leflallhsi dnnkkqa
//
LOCUS       XP_041319894             337 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041319894
VERSION     XP_041319894.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463960.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="monoacylglycerol lipase ABHD6"
                     /calculated_mol_wt=38311
     Region          51..325
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..337
                     /gene="ABHD6"
                     /coded_by="XM_041463960.1:927..1940"
                     /db_xref="GeneID:121351632"
ORIGIN      
        1 mdldmlnmfv iaggtlaipi lafvasfllw psaliriyyw ywrralgmqv ryanyddyqf
       61 cysyrgrpgy rpsilmlhgf sahkdmwlsi vkflpknlhl vcvdmpgheg ttrsdlddys
      121 isgqakrihq fveciklnrk pfhlvgtsmg gnvagvyaaq ypedicsltl icpaglpstt
      181 eskfikqlre qqeskcmdri plipstpeem admlklcsyv rfkvpqqilq glvdvriphn
      241 efyrklflei vdeksrhslh enmskikapt qviwgkqdqv ldvsgasvla saipdchvyi
      301 lencghsvvv erprktanli leflallhsi dnnkkqa
//
LOCUS       XP_041319903             337 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041319903
VERSION     XP_041319903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="monoacylglycerol lipase ABHD6"
                     /calculated_mol_wt=38311
     Region          51..325
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..337
                     /gene="ABHD6"
                     /coded_by="XM_041463969.1:694..1707"
                     /db_xref="GeneID:121351632"
ORIGIN      
        1 mdldmlnmfv iaggtlaipi lafvasfllw psaliriyyw ywrralgmqv ryanyddyqf
       61 cysyrgrpgy rpsilmlhgf sahkdmwlsi vkflpknlhl vcvdmpgheg ttrsdlddys
      121 isgqakrihq fveciklnrk pfhlvgtsmg gnvagvyaaq ypedicsltl icpaglpstt
      181 eskfikqlre qqeskcmdri plipstpeem admlklcsyv rfkvpqqilq glvdvriphn
      241 efyrklflei vdeksrhslh enmskikapt qviwgkqdqv ldvsgasvla saipdchvyi
      301 lencghsvvv erprktanli leflallhsi dnnkkqa
//
LOCUS       XP_041319911             337 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041319911
VERSION     XP_041319911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463977.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="monoacylglycerol lipase ABHD6"
                     /calculated_mol_wt=38311
     Region          51..325
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..337
                     /gene="ABHD6"
                     /coded_by="XM_041463977.1:78..1091"
                     /db_xref="GeneID:121351632"
ORIGIN      
        1 mdldmlnmfv iaggtlaipi lafvasfllw psaliriyyw ywrralgmqv ryanyddyqf
       61 cysyrgrpgy rpsilmlhgf sahkdmwlsi vkflpknlhl vcvdmpgheg ttrsdlddys
      121 isgqakrihq fveciklnrk pfhlvgtsmg gnvagvyaaq ypedicsltl icpaglpstt
      181 eskfikqlre qqeskcmdri plipstpeem admlklcsyv rfkvpqqilq glvdvriphn
      241 efyrklflei vdeksrhslh enmskikapt qviwgkqdqv ldvsgasvla saipdchvyi
      301 lencghsvvv erprktanli leflallhsi dnnkkqa
//
LOCUS       XP_041319924             432 aa            linear   VRT 06-MAY-2021
DEFINITION  caM kinase-like vesicle-associated protein [Pyrgilauda ruficollis].
ACCESSION   XP_041319924
VERSION     XP_041319924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041463990.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="caM kinase-like vesicle-associated protein"
                     /calculated_mol_wt=47285
     Region          22..286
                     /region_name="STKc_CaMK_like"
                     /note="Catalytic domain of an Uncharacterized group of
                     Serine/Threonine kinases with similarity to
                     Calcium/calmodulin-dependent protein kinases; cd14088"
                     /db_xref="CDD:270990"
     Site            order(30..34,38,51,53,83,99..102,106,108,144..145,147,
                     149..150,152,165..166,169,181..185,187)
                     /site_type="active"
                     /db_xref="CDD:270990"
     Site            order(30..33,38,51,53,83,99..102,106,149..150,152,
                     165..166)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270990"
     Site            order(34,106,108,144..145,147,149,169,181..185,187)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270990"
     Site            165..185
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270990"
     CDS             1..432
                     /gene="CAMKV"
                     /coded_by="XM_041463990.1:4..1302"
                     /db_xref="GeneID:121351657"
ORIGIN      
        1 mpfgcvtlgd kkdynqpsev tdrydlgqvi kteefceifr akekttgkly tckkflkrdg
       61 rkvrkaakne iiilkmvkhp nilqlvdvyi trkeyfifle latgrevfdw ildqgyysek
      121 dtsnvirqvl eavaylhslk ivhrnlklen lvyynrlkns kivisdfhla klenglikep
      181 cgtpeylape vvgrqrygrp vdcwaigvim yillsgnppf yeeadeddye nhdknlfrki
      241 lagdyefdpp ywddisqaak elvtrlmeve qdqritaeea ishewisgna asdknikdgv
      301 caqieknfar akwkkavrvt tlmkrlrape qtetaaapap aaapapaatp apaatpapaa
      361 ttapaattap aattaaapap aaaatepaat epatdtapap paaaqppapg tppattcnev
      421 gaaaeppseq sg
//
LOCUS       XP_041319935             385 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Wnt-5a [Pyrgilauda ruficollis].
ACCESSION   XP_041319935
VERSION     XP_041319935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..385
                     /product="protein Wnt-5a"
                     /calculated_mol_wt=42793
     Region          74..385
                     /region_name="Wnt_Wnt5a"
                     /note="Wnt domain found in protein Wnt-5a and similar
                     proteins; cd19347"
                     /db_xref="CDD:381721"
     Site            order(244..245,248..250,258,364,366,368,370)
                     /site_type="other"
                     /note="Frizzled receptor binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381721"
     CDS             1..385
                     /gene="WNT5A"
                     /coded_by="XM_041464001.1:284..1441"
                     /db_xref="GeneID:121351664"
ORIGIN      
        1 mekssavlih ggavgtvgst masqylvval avfssftqvv ieasswwslg mnpmnpmnpv
       61 qmsevyiiga qplcsqlagl sqgqkklcql yqdhmqfige gaktgikecq yqfrhrrwnc
      121 stvdnnsvfg rvmqigsret aftyavsaag vvnamsracr egelsscgcs raarpkdlpr
      181 dwlwggcgdn ieygyrfake fvdarererv yqrgsyesar immnlhnnea grrtvynlad
      241 vackchgvsg scslktcwlq ladfrkvgda lkekydsaaa mklnsrgklv qvnsrfnapt
      301 ihdlvyidps pdycvrnest gslgtqgrlc nktsegmdgc elmccgrgyd qfktvqrerc
      361 hckfhwccyv kcklcteivd qfvck
//
LOCUS       XP_041319946             191 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319946
VERSION     XP_041319946.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464012.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="translation initiation factor IF-2-like isoform
                     X1"
                     /calculated_mol_wt=20477
     CDS             1..191
                     /gene="LOC121351675"
                     /coded_by="XM_041464012.1:1165..1740"
                     /db_xref="GeneID:121351675"
ORIGIN      
        1 mtvtkerher sraqrrsetp vpirdscava rpstqagrpr ragtaagaer cprckarpag
       61 skapvplqgp gapraapqhp grprrpgerw rsapnrgrpr paalpfrrhl rapaplpppl
      121 rsaartapss qaeeapapga aaspallhaa adkvppettq kksnskkklk kkkekeksrl
      181 psstehwrsg v
//
LOCUS       XP_041319956             137 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121351675 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041319956
VERSION     XP_041319956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="uncharacterized protein LOC121351675 isoform X2"
                     /calculated_mol_wt=13733
     CDS             1..137
                     /gene="LOC121351675"
                     /coded_by="XM_041464022.1:747..1160"
                     /db_xref="GeneID:121351675"
ORIGIN      
        1 mpswksnasp dragrsgala agpdtepaqa hgdphaplpd targlqrgge acprragqts
       61 paagdepaqv pdaevgkwgp vscrrksppa prglspgega naegvlsegr gearcargkp
      121 rhptapnalg sfhlats
//
LOCUS       XP_041319968             627 aa            linear   VRT 06-MAY-2021
DEFINITION  transketolase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041319968
VERSION     XP_041319968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464034.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="transketolase isoform X1"
                     /calculated_mol_wt=68454
     Region          8..620
                     /region_name="PRK05899"
                     /note="transketolase; Reviewed"
                     /db_xref="CDD:235639"
     CDS             1..627
                     /gene="TKT"
                     /coded_by="XM_041464034.1:190..2073"
                     /db_xref="GeneID:121351683"
ORIGIN      
        1 medyhkpdqq tlqalkdtan rlrigsikat taagsghpts ccsaaeimsv lffhtmrykv
       61 qdprnasndr fvlskghaap ilysvwaeag flqeaellnl rkidsvlegh pvprqaftdv
      121 atgslgqglg aacgmaytgk ffdrasyrvy cllgdgelse gsvweamafa gfykldnlva
      181 ifdinrlgqs dpaplqhhve iyqkrceafg whaiivdghs veelckafgq akhqptaiia
      241 ktfkgkgisg vedkeswhgk plpknmaeqv iqeiddriqn kkklspalpe edapivnirn
      301 ikmpspptyk vgekwatrka ygvalaklgh andrvialdg dtknstfsel fkkehpsryi
      361 ecyiaeqnmv siavgcatrd rtvafastfa tffsrafdqi rmaaisdsnv nlcgshcgvs
      421 igedgpsqmg ledlcmfrai pnstvfypsd avatekavei aantkgicfi rtsrpenpvi
      481 ynnnedfhvg qakvvlkskd dqvtvigagv tlhealaaae qlrkekiyir vidpftikpl
      541 dkktilenar atkgriitve dhyheggige avcaavvgep gvtvtrlavs hvprsgkpae
      601 llrmfgidkd aimqavraav sksrnae
//
LOCUS       XP_041319976             601 aa            linear   VRT 06-MAY-2021
DEFINITION  transketolase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319976
VERSION     XP_041319976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="transketolase isoform X2"
                     /calculated_mol_wt=65617
     Region          9..594
                     /region_name="PRK05899"
                     /note="transketolase; Reviewed"
                     /db_xref="CDD:235639"
     CDS             1..601
                     /gene="TKT"
                     /coded_by="XM_041464042.1:419..2224"
                     /db_xref="GeneID:121351683"
ORIGIN      
        1 mwssgathss hptsccsaae imsvlffhtm rykvqdprna sndrfvlskg haapilysvw
       61 aeagflqeae llnlrkidsv leghpvprqa ftdvatgslg qglgaacgma ytgkffdras
      121 yrvycllgdg elsegsvwea mafagfykld nlvaifdinr lgqsdpaplq hhveiyqkrc
      181 eafgwhaiiv dghsveelck afgqakhqpt aiiaktfkgk gisgvedkes whgkplpknm
      241 aeqviqeidd riqnkkklsp alpeedapiv nirnikmpsp ptykvgekwa trkaygvala
      301 klghandrvi aldgdtknst fselfkkehp sryiecyiae qnmvsiavgc atrdrtvafa
      361 stfatffsra fdqirmaais dsnvnlcgsh cgvsigedgp sqmgledlcm fraipnstvf
      421 ypsdavatek aveiaantkg icfirtsrpe npviynnned fhvgqakvvl kskddqvtvi
      481 gagvtlheal aaaeqlrkek iyirvidpft ikpldkktil enaratkgri itvedhyheg
      541 gigeavcaav vgepgvtvtr lavshvprsg kpaellrmfg idkdaimqav raavsksrna
      601 e
//
LOCUS       XP_041319985             601 aa            linear   VRT 06-MAY-2021
DEFINITION  transketolase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041319985
VERSION     XP_041319985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464051.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="transketolase isoform X2"
                     /calculated_mol_wt=65617
     Region          9..594
                     /region_name="PRK05899"
                     /note="transketolase; Reviewed"
                     /db_xref="CDD:235639"
     CDS             1..601
                     /gene="TKT"
                     /coded_by="XM_041464051.1:424..2229"
                     /db_xref="GeneID:121351683"
ORIGIN      
        1 mwssgathss hptsccsaae imsvlffhtm rykvqdprna sndrfvlskg haapilysvw
       61 aeagflqeae llnlrkidsv leghpvprqa ftdvatgslg qglgaacgma ytgkffdras
      121 yrvycllgdg elsegsvwea mafagfykld nlvaifdinr lgqsdpaplq hhveiyqkrc
      181 eafgwhaiiv dghsveelck afgqakhqpt aiiaktfkgk gisgvedkes whgkplpknm
      241 aeqviqeidd riqnkkklsp alpeedapiv nirnikmpsp ptykvgekwa trkaygvala
      301 klghandrvi aldgdtknst fselfkkehp sryiecyiae qnmvsiavgc atrdrtvafa
      361 stfatffsra fdqirmaais dsnvnlcgsh cgvsigedgp sqmgledlcm fraipnstvf
      421 ypsdavatek aveiaantkg icfirtsrpe npviynnned fhvgqakvvl kskddqvtvi
      481 gagvtlheal aaaeqlrkek iyirvidpft ikpldkktil enaratkgri itvedhyheg
      541 gigeavcaav vgepgvtvtr lavshvprsg kpaellrmfg idkdaimqav raavsksrna
      601 e
//
LOCUS       XP_041319993             580 aa            linear   VRT 06-MAY-2021
DEFINITION  transketolase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041319993
VERSION     XP_041319993.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464059.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..580
                     /product="transketolase isoform X3"
                     /calculated_mol_wt=63485
     Region          1..573
                     /region_name="PRK05899"
                     /note="transketolase; Reviewed"
                     /db_xref="CDD:235639"
     CDS             1..580
                     /gene="TKT"
                     /coded_by="XM_041464059.1:191..1933"
                     /db_xref="GeneID:121351683"
ORIGIN      
        1 msvlffhtmr ykvqdprnas ndrfvlskgh aapilysvwa eagflqeael lnlrkidsvl
       61 eghpvprqaf tdvatgslgq glgaacgmay tgkffdrasy rvycllgdge lsegsvweam
      121 afagfykldn lvaifdinrl gqsdpaplqh hveiyqkrce afgwhaiivd ghsveelcka
      181 fgqakhqpta iiaktfkgkg isgvedkesw hgkplpknma eqviqeiddr iqnkkklspa
      241 lpeedapivn irnikmpspp tykvgekwat rkaygvalak lghandrvia ldgdtknstf
      301 selfkkehps ryiecyiaeq nmvsiavgca trdrtvafas tfatffsraf dqirmaaisd
      361 snvnlcgshc gvsigedgps qmgledlcmf raipnstvfy psdavateka veiaantkgi
      421 cfirtsrpen pviynnnedf hvgqakvvlk skddqvtvig agvtlheala aaeqlrkeki
      481 yirvidpfti kpldkktile naratkgrii tvedhyhegg igeavcaavv gepgvtvtrl
      541 avshvprsgk paellrmfgi dkdaimqavr aavsksrnae
//
LOCUS       XP_041320004             256 aa            linear   VRT 06-MAY-2021
DEFINITION  mesencephalic astrocyte-derived neurotrophic factor [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320004
VERSION     XP_041320004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464070.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="mesencephalic astrocyte-derived neurotrophic
                     factor"
                     /calculated_mol_wt=27530
     Region          103..199
                     /region_name="ARMET_N"
                     /note="ARMET, N-terminal; pfam20145"
                     /db_xref="CDD:466306"
     Region          203..245
                     /region_name="ARMET_C"
                     /note="ARMET, C-terminal; pfam10208"
                     /db_xref="CDD:462997"
     CDS             1..256
                     /gene="MANF"
                     /coded_by="XM_041464070.1:16..786"
                     /db_xref="GeneID:121351707"
ORIGIN      
        1 maakrggdpr rapplrrlsp isgrqlsrgg dgaangsger ggragsgpmg rrrrgqpvrg
       61 asaggagaag aagrggmraa hglcaalall llpaggralr dgdcevcvtf lgrfyqslkd
      121 ndveftpssi ekellkscke akgkenrlcy yigatsdaat kiinevskpm shhipvekic
      181 eklkkkdsqi celkydkqid lstadlrklr vkelrrildd wgevckgcve kydfirrihe
      241 lmpkyapraa gartdl
//
LOCUS       XP_041320016             463 aa            linear   VRT 06-MAY-2021
DEFINITION  NEDD8-activating enzyme E1 catalytic subunit isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320016
VERSION     XP_041320016.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464082.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="NEDD8-activating enzyme E1 catalytic subunit
                     isoform X1"
                     /calculated_mol_wt=51426
     Region          71..368
                     /region_name="Uba3_RUB"
                     /note="Ubiquitin activating enzyme (E1) subunit UBA3. UBA3
                     is part of the heterodimeric activating enzyme (E1),
                     specific for the Rub family of ubiquitin-like proteins
                     (Ubls). E1 enzymes are part of a conjugation cascade to
                     attach Ub or Ubls, covalently to...; cd01488"
                     /db_xref="CDD:238765"
     Site            order(76,78,80,100,102,111,124,165,171)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:238765"
     Site            order(78,80,166..167,172,203..204,208..209,223,226,
                     229..230,342,344,346,352,354,356..357,359)
                     /site_type="other"
                     /note="substrate interface [chemical binding]"
                     /db_xref="CDD:238765"
     Site            order(83,86,90,107,109..111,113..114,116,131..132,
                     134..135,206,300,303..304,309..314,318)
                     /site_type="other"
                     /note="dimer interaction [polypeptide binding]"
                     /db_xref="CDD:238765"
     Site            order(220,223,364,367)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238765"
     Site            237
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238765"
     Region          376..461
                     /region_name="E2_bind"
                     /note="E2 binding domain; pfam08825"
                     /db_xref="CDD:462611"
     CDS             1..463
                     /gene="UBA3"
                     /coded_by="XM_041464082.1:30..1421"
                     /db_xref="GeneID:121351716"
ORIGIN      
        1 madgeepekk rrrleellad gmavdggcgd sadwegrwnh vkkflersgp fthpdfepgt
       61 qaldfllstc kvlvigaggl gcellknlal sgfrqihvid mdtidvsnln rqflfrakdv
      121 grpkaevaae flnsripnca vvpyfkkiqd mdesfyrqfh iivcgldsii arrwingmlm
      181 sflhyedgvl dpssiiplid ggtegfkgnv rviipgmtac vectlalypp qvnfpmctia
      241 smprlpehci eyvrilqwpk eqpfgegial dgddpehiqw iyqksleras qfnikgvtyr
      301 ltqgvvkrii pavastnavi aavcatevfk iatsayvpln nylvfndvdg lytysfeaer
      361 kencpacsql pqnieispsa klqeildylt nnaslqmksp aitatmyggn ktlylqtvas
      421 ieertrpnls ktlkelglvd gqelavadvt tpqtmlfklh ftt
//
LOCUS       XP_041320023             449 aa            linear   VRT 06-MAY-2021
DEFINITION  NEDD8-activating enzyme E1 catalytic subunit isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320023
VERSION     XP_041320023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..449
                     /product="NEDD8-activating enzyme E1 catalytic subunit
                     isoform X2"
                     /calculated_mol_wt=49731
     Region          57..354
                     /region_name="Uba3_RUB"
                     /note="Ubiquitin activating enzyme (E1) subunit UBA3. UBA3
                     is part of the heterodimeric activating enzyme (E1),
                     specific for the Rub family of ubiquitin-like proteins
                     (Ubls). E1 enzymes are part of a conjugation cascade to
                     attach Ub or Ubls, covalently to...; cd01488"
                     /db_xref="CDD:238765"
     Site            order(62,64,66,86,88,97,110,151,157)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:238765"
     Site            order(64,66,152..153,158,189..190,194..195,209,212,
                     215..216,328,330,332,338,340,342..343,345)
                     /site_type="other"
                     /note="substrate interface [chemical binding]"
                     /db_xref="CDD:238765"
     Site            order(69,72,76,93,95..97,99..100,102,117..118,120..121,
                     192,286,289..290,295..300,304)
                     /site_type="other"
                     /note="dimer interaction [polypeptide binding]"
                     /db_xref="CDD:238765"
     Site            order(206,209,350,353)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238765"
     Site            223
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238765"
     Region          362..447
                     /region_name="E2_bind"
                     /note="E2 binding domain; pfam08825"
                     /db_xref="CDD:462611"
     CDS             1..449
                     /gene="UBA3"
                     /coded_by="XM_041464089.1:22..1371"
                     /db_xref="GeneID:121351716"
ORIGIN      
        1 madgeepmav dggcgdsadw egrwnhvkkf lersgpfthp dfepgtqald fllstckvlv
       61 igagglgcel lknlalsgfr qihvidmdti dvsnlnrqfl frakdvgrpk aevaaeflns
      121 ripncavvpy fkkiqdmdes fyrqfhiivc gldsiiarrw ingmlmsflh yedgvldpss
      181 iiplidggte gfkgnvrvii pgmtacvect lalyppqvnf pmctiasmpr lpehcieyvr
      241 ilqwpkeqpf gegialdgdd pehiqwiyqk slerasqfni kgvtyrltqg vvkriipava
      301 stnaviaavc atevfkiats ayvplnnylv fndvdglyty sfeaerkenc pacsqlpqni
      361 eispsaklqe ildyltnnas lqmkspaita tmyggnktly lqtvasieer trpnlsktlk
      421 elglvdgqel avadvttpqt mlfklhftt
//
LOCUS       XP_041320032             442 aa            linear   VRT 06-MAY-2021
DEFINITION  NEDD8-activating enzyme E1 catalytic subunit isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320032
VERSION     XP_041320032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..442
                     /product="NEDD8-activating enzyme E1 catalytic subunit
                     isoform X3"
                     /calculated_mol_wt=49002
     Region          50..347
                     /region_name="Uba3_RUB"
                     /note="Ubiquitin activating enzyme (E1) subunit UBA3. UBA3
                     is part of the heterodimeric activating enzyme (E1),
                     specific for the Rub family of ubiquitin-like proteins
                     (Ubls). E1 enzymes are part of a conjugation cascade to
                     attach Ub or Ubls, covalently to...; cd01488"
                     /db_xref="CDD:238765"
     Site            order(55,57,59,79,81,90,103,144,150)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:238765"
     Site            order(57,59,145..146,151,182..183,187..188,202,205,
                     208..209,321,323,325,331,333,335..336,338)
                     /site_type="other"
                     /note="substrate interface [chemical binding]"
                     /db_xref="CDD:238765"
     Site            order(62,65,69,86,88..90,92..93,95,110..111,113..114,185,
                     279,282..283,288..293,297)
                     /site_type="other"
                     /note="dimer interaction [polypeptide binding]"
                     /db_xref="CDD:238765"
     Site            order(199,202,343,346)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238765"
     Site            216
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238765"
     Region          355..440
                     /region_name="E2_bind"
                     /note="E2 binding domain; pfam08825"
                     /db_xref="CDD:462611"
     CDS             1..442
                     /gene="UBA3"
                     /coded_by="XM_041464098.1:117..1445"
                     /db_xref="GeneID:121351716"
ORIGIN      
        1 mavdggcgds adwegrwnhv kkflersgpf thpdfepgtq aldfllstck vlvigagglg
       61 cellknlals gfrqihvidm dtidvsnlnr qflfrakdvg rpkaevaaef lnsripncav
      121 vpyfkkiqdm desfyrqfhi ivcgldsiia rrwingmlms flhyedgvld pssiiplidg
      181 gtegfkgnvr viipgmtacv ectlalyppq vnfpmctias mprlpehcie yvrilqwpke
      241 qpfgegiald gddpehiqwi yqkslerasq fnikgvtyrl tqgvvkriip avastnavia
      301 avcatevfki atsayvplnn ylvfndvdgl ytysfeaerk encpacsqlp qnieispsak
      361 lqeildyltn naslqmkspa itatmyggnk tlylqtvasi eertrpnlsk tlkelglvdg
      421 qelavadvtt pqtmlfklhf tt
//
LOCUS       XP_041320043             126 aa            linear   VRT 06-MAY-2021
DEFINITION  histone H2A type 2-B [Pyrgilauda ruficollis].
ACCESSION   XP_041320043
VERSION     XP_041320043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..126
                     /product="histone H2A type 2-B"
                     /calculated_mol_wt=13376
     Region          1..126
                     /region_name="PTZ00017"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:185399"
     CDS             1..126
                     /gene="LOC121351734"
                     /coded_by="XM_041464109.1:126..506"
                     /db_xref="GeneID:121351734"
ORIGIN      
        1 msgrgksggk arakaksrss raglqfpvgr vhrllrkgny aervgagapv ylaavleyls
       61 aeilelagna ardnkktrii prhlqlairn deelnkllgg vtiaqggvlp niqavllpkk
      121 tqsskk
//
LOCUS       XP_041320054             124 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell leukemia translocation-altered gene protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320054
VERSION     XP_041320054.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464120.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..124
                     /product="T-cell leukemia translocation-altered gene
                     protein"
                     /calculated_mol_wt=12838
     Region          14..124
                     /region_name="T_cell_tran_alt"
                     /note="T-cell leukemia translocation-altered; pfam15128"
                     /db_xref="CDD:464518"
     CDS             1..124
                     /gene="TCTA"
                     /coded_by="XM_041464120.1:53..427"
                     /db_xref="GeneID:121351744"
ORIGIN      
        1 maavaagwqp pwralaalgr elaaewaaqd vraalcqlll lwlgisllgv rlawraygga
       61 vaalcyrtgp agrrspgtas gaspsrprah slspagpagr ngaaerhcpp rdgpttepmk
      121 thre
//
LOCUS       XP_041320057             462 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase TRAIP [Pyrgilauda ruficollis].
ACCESSION   XP_041320057
VERSION     XP_041320057.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464123.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..462
                     /product="E3 ubiquitin-protein ligase TRAIP"
                     /calculated_mol_wt=52096
     Region          6..50
                     /region_name="RING-H2_TRAIP"
                     /note="RING finger, H2 subclass, found in TRAF-interacting
                     protein (TRAIP) and similar proteins; cd16480"
                     /db_xref="CDD:438143"
     Region          55..>279
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..462
                     /gene="LOC121351759"
                     /coded_by="XM_041464123.1:1..1389"
                     /db_xref="GeneID:121351759"
ORIGIN      
        1 mpirahctic sdffdnerdv aavpcghtfh qaclfqwfdt apsrtcpqcr nqvskrhiis
       61 klffdvtlde qaapdaetlq neldkvkaql slkekekrec qavvdglrdt ldvrnaties
      121 lqkmlgetem lcsslkkqmk fleqqqednr sskeearrlr nklrtmerie lllqsqrpev
      181 eemirdmgvg qaaveqlaiy cvslkkeyen lkearkisge mteklkkelf svnnklqktt
      241 selektkeel kstqkdlkna dkeilslkkk idilqdtlkv psvtretlsr lvlespapme
      301 lhpklhrpah sdeinldatf dvdtpehqpc tapfgpakrq kldkkpppvv nlakkvlket
      361 vengaddled dalkgllpaf irnsflskkp ssggllgshr nmgsvrtgyd gmggrtkfie
      421 ptnlteirpl pvrsrkkvsr pasaapafss sssqarmdtf lq
//
LOCUS       XP_041320068             601 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320068
VERSION     XP_041320068.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464134.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="kelch repeat and BTB domain-containing protein
                     8"
                     /calculated_mol_wt=68709
     Region          27..155
                     /region_name="BTB_POZ_KBTBD8"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch repeat
                     and BTB domain-containing protein 8 (KBTBD8); cd18274"
                     /db_xref="CDD:349583"
     Region          50..516
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          147..243
                     /region_name="BACK_KBTBD8"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 8 (KBTBD8);
                     cd18483"
                     /db_xref="CDD:350558"
     Region          330..376
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          380..428
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          431..467
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          519..571
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..601
                     /gene="KBTBD8"
                     /coded_by="XM_041464134.1:95..1900"
                     /db_xref="GeneID:121351768"
ORIGIN      
        1 maalgepsqf sqtlngvpps nqvssgmdpf hacsilqqlk tmydegqltd ivvevdhgkt
       61 fschrnvlaa ispyfrsmft sgltestqke vrivgveaes mhlvlnyayt srvvlteanv
      121 qalftaasif qipsiqdqca kymishldpq nsigvfifad hyghqelkdr sqdyirkkfl
      181 svtkeqeflq lrkdqlisil nsddlnvdke ehvyesiirw feheqnkrev hlpeifakci
      241 rmplldetfl ekippvfaqa makscvqkgq psangytqrl gmtasemiic fdaahkhsgk
      301 kqtvpcldsv tgrvfklckp pndlrevgil vspdndiyia ggyrpsssev sidhraesdf
      361 wmydhsgnrw ipkapllrar igcklvhccg klyaiggrvy egdgrnslks vecydsrenc
      421 wtavcpmpva mefhsaveyk dniyvlqgef flcydpqkdy wgfltpmtvp riqglatvyn
      481 dsiyyiagtc gnhqrmftve aydieqnkwt rkkdfpcdqs inpyiklvll knklhlfvra
      541 tqvtveehvf rtsrknslyq ydevtdqwqk vyetpdrlwd lgrhfecvva klypqclqkv
      601 i
//
LOCUS       XP_041320078             133 aa            linear   VRT 06-MAY-2021
DEFINITION  chemokine-like protein TAFA-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320078
VERSION     XP_041320078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..133
                     /product="chemokine-like protein TAFA-1"
                     /calculated_mol_wt=14738
     Region          41..129
                     /region_name="TAFA"
                     /note="TAFA family; pfam12020"
                     /db_xref="CDD:432266"
     CDS             1..133
                     /gene="TAFA1"
                     /coded_by="XM_041464144.1:16..417"
                     /db_xref="GeneID:121351779"
ORIGIN      
        1 mavvsamswv lylwisacam llcqgslhht fqqhhlhrpe ggtceviaah rccnknriee
       61 rsqtvkcscl pgkvagttrn rpscvdasiv igkwwcemep clegeecktl pdnsgwmcat
      121 gnkikttrih prt
//
LOCUS       XP_041320091             225 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM3D [Pyrgilauda ruficollis].
ACCESSION   XP_041320091
VERSION     XP_041320091.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464157.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..225
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..225
                     /product="protein FAM3D"
                     /calculated_mol_wt=25009
     Region          52..221
                     /region_name="ILEI_FAM3C"
                     /note="Interleukin-like EMT inducer; cd13940"
                     /db_xref="CDD:260114"
     CDS             1..225
                     /gene="FAM3D"
                     /coded_by="XM_041464157.1:10..687"
                     /db_xref="GeneID:121351784"
ORIGIN      
        1 mrvtsvirsv vllltllgtw fimqtyfqhs wkaislrswl gatkklssek lprhkcgnqk
       61 scpqnyfafk iisgaanvvg psicfedlvl mssvknnigr glnialvngt tgkllktdaf
      121 dmysgdvakl qtflqgikrg tlvltasydd aatkmndkvr ayftelgssh vgklgfrdnw
      181 vflgakglmn kspfekhikn dketnkyegw pellemegca prkmd
//
LOCUS       XP_041320100            1035 aa            linear   VRT 06-MAY-2021
DEFINITION  FERM domain-containing protein 4B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320100
VERSION     XP_041320100.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464166.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1035
                     /product="FERM domain-containing protein 4B isoform X1"
                     /calculated_mol_wt=116868
     Region          57..145
                     /region_name="FERM_F1_FRMD4B"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 4B (FRMD4B); cd17200"
                     /db_xref="CDD:340720"
     Region          60..260
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          256..366
                     /region_name="FERM_C_FRMD4A_FRMD4B"
                     /note="FERM domain C-lobe of FERM domain-containing
                     protein 4A and 4B (FRMD4A and 4B); cd13191"
                     /db_xref="CDD:270012"
     Site            order(264,281,283,292)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270012"
     Site            order(296,301..304,347,351,354..355)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270012"
     Site            347..358
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270012"
     Region          395..529
                     /region_name="CUPID"
                     /note="Cytohesin Ubiquitin Protein Inducing Domain;
                     pfam11819"
                     /db_xref="CDD:463360"
     CDS             1..1035
                     /gene="FRMD4B"
                     /coded_by="XM_041464166.1:469..3576"
                     /db_xref="GeneID:121351796"
ORIGIN      
        1 masvlmcgve dlllggsrll wtvtvaalrr cyaarlracr qalrawcglr dvyqmtegrh
       61 cqvhllddrn lellvqpkll srelldlvas hfnlkekeyf gitfiddtgq svwlqldhrv
      121 ldhdlpkkpg patlyfavrf yiesisflkd kttvelffln akscvhqgqi evdsetvfkl
      181 aalvlqeakg dyssdentrk dlktlpvfpt ktlqehpsla ycedrviehy tqikgltrgq
      241 aivqymkvve alptygvhyy gvkdkqgipw wlgisykgig qydlqdkvkp rklfqwkqle
      301 nlyfrekkfa vevhdprris vsrrtfgqsg lvvqtwyant sliksiwvma isqhqfyldr
      361 kqskakipsa rslddiamdl temgtpkvsk lvtleaknql imasngslis sgsqdsevse
      421 eqkkekimel kkkekllqek llqkveelkk iclreaeltg kmpkeyplga geeppqvrrr
      481 vgtafklddn llpseedptl qdlesnfiih qklveaakkl asepdlcknv kkkrkqeyad
      541 avkklqeien sineyrikcg kkptqkstla lpddiipses sslsdtttyd dvseslpaaa
      601 qrpssaqlsp rlpppkslgv erihlrkssv neqllesrhs rdvlsthssp frtlerpaqp
      661 qggrsmpttp vltrnaysss hlqpdvsphh crqrsgsles qthllsetpa ekpafslsks
      721 qrsssteild dgssytsqss aeyycvtptp npyyttqtld nrtrgrrrsk khnisaassg
      781 smpnlahkdv rsgvfhknqe qpsssyyisg yspytepdvy ynggyvyesd tegqysvnps
      841 yrssahygye ryrefrsyhe devdrvphnp yatlrlprkq vaktehitkn ihkalvaehl
      901 rgwyqrasgq keqghslqag fesdrgsqrs lgfaglqtpc spssrvssfs sasstntagn
      961 wrtplalgls dydtlshssy ascygnvygn lplqsrtyve psqlggeeed gleaelpsse
     1021 qrlfwhedsk pgtlv
//
LOCUS       XP_041320107             981 aa            linear   VRT 06-MAY-2021
DEFINITION  FERM domain-containing protein 4B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320107
VERSION     XP_041320107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..981
                     /product="FERM domain-containing protein 4B isoform X2"
                     /calculated_mol_wt=110829
     Region          3..91
                     /region_name="FERM_F1_FRMD4B"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 4B (FRMD4B); cd17200"
                     /db_xref="CDD:340720"
     Region          6..206
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          202..312
                     /region_name="FERM_C_FRMD4A_FRMD4B"
                     /note="FERM domain C-lobe of FERM domain-containing
                     protein 4A and 4B (FRMD4A and 4B); cd13191"
                     /db_xref="CDD:270012"
     Site            order(210,227,229,238)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270012"
     Site            order(242,247..250,293,297,300..301)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270012"
     Site            293..304
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270012"
     Region          341..475
                     /region_name="CUPID"
                     /note="Cytohesin Ubiquitin Protein Inducing Domain;
                     pfam11819"
                     /db_xref="CDD:463360"
     CDS             1..981
                     /gene="FRMD4B"
                     /coded_by="XM_041464173.1:106..3051"
                     /db_xref="GeneID:121351796"
ORIGIN      
        1 mtegrhcqvh llddrnlell vqpkllsrel ldlvashfnl kekeyfgitf iddtgqsvwl
       61 qldhrvldhd lpkkpgpatl yfavrfyies isflkdkttv elfflnaksc vhqgqievds
      121 etvfklaalv lqeakgdyss dentrkdlkt lpvfptktlq ehpslayced rviehytqik
      181 gltrgqaivq ymkvvealpt ygvhyygvkd kqgipwwlgi sykgigqydl qdkvkprklf
      241 qwkqlenlyf rekkfavevh dprrisvsrr tfgqsglvvq twyantslik siwvmaisqh
      301 qfyldrkqsk akipsarsld diamdltemg tpkvsklvtl eaknqlimas ngslissgsq
      361 dsevseeqkk ekimelkkke kllqekllqk veelkkiclr eaeltgkmpk eyplgageep
      421 pqvrrrvgta fklddnllps eedptlqdle snfiihqklv eaakklasep dlcknvkkkr
      481 kqeyadavkk lqeiensine yrikcgkkpt qkstlalpdd iipsesssls dtttyddvse
      541 slpaaaqrps saqlsprlpp pkslgverih lrkssvneql lesrhsrdvl sthsspfrtl
      601 erpaqpqggr smpttpvltr nayssshlqp dvsphhcrqr sgslesqthl lsetpaekpa
      661 fslsksqrss steilddgss ytsqssaeyy cvtptpnpyy ttqtldnrtr grrrskkhni
      721 saassgsmpn lahkdvrsgv fhknqeqpss syyisgyspy tepdvyyngg yvyesdtegq
      781 ysvnpsyrss ahygyeryre frsyhedevd rvphnpyatl rlprkqvakt ehitknihka
      841 lvaehlrgwy qrasgqkeqg hslqagfesd rgsqrslgfa glqtpcspss rvssfssass
      901 tntagnwrtp lalglsdydt lshssyascy gnvygnlplq srtyvepsql ggeeedglea
      961 elpsseqrlf whedskpgtl v
//
LOCUS       XP_041320116             981 aa            linear   VRT 06-MAY-2021
DEFINITION  FERM domain-containing protein 4B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320116
VERSION     XP_041320116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..981
                     /product="FERM domain-containing protein 4B isoform X2"
                     /calculated_mol_wt=110829
     Region          3..91
                     /region_name="FERM_F1_FRMD4B"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 4B (FRMD4B); cd17200"
                     /db_xref="CDD:340720"
     Region          6..206
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          202..312
                     /region_name="FERM_C_FRMD4A_FRMD4B"
                     /note="FERM domain C-lobe of FERM domain-containing
                     protein 4A and 4B (FRMD4A and 4B); cd13191"
                     /db_xref="CDD:270012"
     Site            order(210,227,229,238)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270012"
     Site            order(242,247..250,293,297,300..301)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270012"
     Site            293..304
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270012"
     Region          341..475
                     /region_name="CUPID"
                     /note="Cytohesin Ubiquitin Protein Inducing Domain;
                     pfam11819"
                     /db_xref="CDD:463360"
     CDS             1..981
                     /gene="FRMD4B"
                     /coded_by="XM_041464182.1:26..2971"
                     /db_xref="GeneID:121351796"
ORIGIN      
        1 mtegrhcqvh llddrnlell vqpkllsrel ldlvashfnl kekeyfgitf iddtgqsvwl
       61 qldhrvldhd lpkkpgpatl yfavrfyies isflkdkttv elfflnaksc vhqgqievds
      121 etvfklaalv lqeakgdyss dentrkdlkt lpvfptktlq ehpslayced rviehytqik
      181 gltrgqaivq ymkvvealpt ygvhyygvkd kqgipwwlgi sykgigqydl qdkvkprklf
      241 qwkqlenlyf rekkfavevh dprrisvsrr tfgqsglvvq twyantslik siwvmaisqh
      301 qfyldrkqsk akipsarsld diamdltemg tpkvsklvtl eaknqlimas ngslissgsq
      361 dsevseeqkk ekimelkkke kllqekllqk veelkkiclr eaeltgkmpk eyplgageep
      421 pqvrrrvgta fklddnllps eedptlqdle snfiihqklv eaakklasep dlcknvkkkr
      481 kqeyadavkk lqeiensine yrikcgkkpt qkstlalpdd iipsesssls dtttyddvse
      541 slpaaaqrps saqlsprlpp pkslgverih lrkssvneql lesrhsrdvl sthsspfrtl
      601 erpaqpqggr smpttpvltr nayssshlqp dvsphhcrqr sgslesqthl lsetpaekpa
      661 fslsksqrss steilddgss ytsqssaeyy cvtptpnpyy ttqtldnrtr grrrskkhni
      721 saassgsmpn lahkdvrsgv fhknqeqpss syyisgyspy tepdvyyngg yvyesdtegq
      781 ysvnpsyrss ahygyeryre frsyhedevd rvphnpyatl rlprkqvakt ehitknihka
      841 lvaehlrgwy qrasgqkeqg hslqagfesd rgsqrslgfa glqtpcspss rvssfssass
      901 tntagnwrtp lalglsdydt lshssyascy gnvygnlplq srtyvepsql ggeeedglea
      961 elpsseqrlf whedskpgtl v
//
LOCUS       XP_041320127             187 aa            linear   VRT 06-MAY-2021
DEFINITION  protein shisa-5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320127
VERSION     XP_041320127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..187
                     /product="protein shisa-5 isoform X1"
                     /calculated_mol_wt=20148
     Region          <54..157
                     /region_name="Shisa"
                     /note="Wnt and FGF inhibitory regulator; pfam13908"
                     /db_xref="CDD:464036"
     CDS             1..187
                     /gene="SHISA5"
                     /coded_by="XM_041464193.1:16..579"
                     /db_xref="GeneID:121351816"
ORIGIN      
        1 msyslckksp daedpletvk kiaekmrklt stnwisdsdi fqdpdldfsg psfgtliaig
       61 vtvfavivit iilcltcscc clykacrrpr pvvttatttv vhsaypqqpv mppnypaapy
      121 qgyqpvavqp qpgvpvapyp aqypppyptq pagppayhet vavgagapyp tqppynpaym
      181 dpqkpty
//
LOCUS       XP_041320135             162 aa            linear   VRT 06-MAY-2021
DEFINITION  protein shisa-5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320135
VERSION     XP_041320135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464201.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="protein shisa-5 isoform X2"
                     /calculated_mol_wt=17355
     Region          <29..132
                     /region_name="Shisa"
                     /note="Wnt and FGF inhibitory regulator; pfam13908"
                     /db_xref="CDD:464036"
     CDS             1..162
                     /gene="SHISA5"
                     /coded_by="XM_041464201.1:137..625"
                     /db_xref="GeneID:121351816"
ORIGIN      
        1 mrkltstnwi sdsdifqdpd ldfsgpsfgt liaigvtvfa vivitiilcl tcsccclyka
       61 crrprpvvtt atttvvhsay pqqpvmppny paapyqgyqp vavqpqpgvp vapypaqypp
      121 pyptqpagpp ayhetvavga gapyptqppy npaymdpqkp ty
//
LOCUS       XP_041320142             162 aa            linear   VRT 06-MAY-2021
DEFINITION  protein shisa-5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320142
VERSION     XP_041320142.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464208.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="protein shisa-5 isoform X2"
                     /calculated_mol_wt=17355
     Region          <29..132
                     /region_name="Shisa"
                     /note="Wnt and FGF inhibitory regulator; pfam13908"
                     /db_xref="CDD:464036"
     CDS             1..162
                     /gene="SHISA5"
                     /coded_by="XM_041464208.1:146..634"
                     /db_xref="GeneID:121351816"
ORIGIN      
        1 mrkltstnwi sdsdifqdpd ldfsgpsfgt liaigvtvfa vivitiilcl tcsccclyka
       61 crrprpvvtt atttvvhsay pqqpvmppny paapyqgyqp vavqpqpgvp vapypaqypp
      121 pyptqpagpp ayhetvavga gapyptqppy npaymdpqkp ty
//
LOCUS       XP_041320153             643 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320153
VERSION     XP_041320153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..643
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X1"
                     /calculated_mol_wt=71081
     Region          220..628
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..643
                     /gene="TMCC1"
                     /coded_by="XM_041464219.1:165..2096"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mepsgteqls ddpdpggksq dqdtkkqhes eqklskithn aleninvigq glkhlfqhqr
       61 rrssvsphdv qqvqaelepd ldlesqsvca eidgvsthpt alnrvlqqir vppkmkrgts
      121 lhsrwgkgda pkgspqinrr saqdiqsgrp rsssttdapt nlsvmeiass iyvggeeaaa
      181 aaierlevss laqtssavas stdgsinads vdgtpdpqrt kvaithlqqk ilklteqiki
      241 eqtarddnva eylklannad kqqsarikqv fekknqksaq tilqlqkkle hyhrklreie
      301 qngiprqpkd vfrdmhqglk dvgakvtgfs egvvdsvkgg lssfsqaths aagavvskpr
      361 eiaslirnkf gsadnianlk dsleegqedg tgskalgviq nfqsspkygs eedcssatsg
      421 svgansttgg pvgasssktn tldmqssgfd ailheiqeir etqarleesf edlkvryqrd
      481 ytlimqtlqe eryrcerlee qlndltelhq neilnlkqel asmeekiayq syerardiqe
      541 aleacqtris kmelqqqqqq vvqleglena tarnllgkfi nillavmavl lvfvstvanc
      601 vvplmktrnr tfstlfivvf iaflwkhwda itgylerfls ppr
//
LOCUS       XP_041320163             529 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320163
VERSION     XP_041320163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464229.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X2"
                     /calculated_mol_wt=58393
     Region          106..514
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..529
                     /gene="TMCC1"
                     /coded_by="XM_041464229.1:416..2005"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mkrgtslhsr wgkgdapkgs pqinrrsaqd iqsgrprsss ttdaptnlsv meiassiyvg
       61 geeaaaaaie rlevsslaqt ssavasstdg sinadsvdgt pdpqrtkvai thlqqkilkl
      121 teqikieqta rddnvaeylk lannadkqqs arikqvfekk nqksaqtilq lqkklehyhr
      181 klreieqngi prqpkdvfrd mhqglkdvga kvtgfsegvv dsvkgglssf sqathsaaga
      241 vvskpreias lirnkfgsad nianlkdsle egqedgtgsk algviqnfqs spkygseedc
      301 ssatsgsvga nsttggpvga sssktntldm qssgfdailh eiqeiretqa rleesfedlk
      361 vryqrdytli mqtlqeeryr cerleeqlnd ltelhqneil nlkqelasme ekiayqsyer
      421 ardiqealea cqtriskmel qqqqqqvvql eglenatarn llgkfinill avmavllvfv
      481 stvancvvpl mktrnrtfst lfivvfiafl wkhwdaitgy lerflsppr
//
LOCUS       XP_041320170             529 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320170
VERSION     XP_041320170.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464236.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X2"
                     /calculated_mol_wt=58393
     Region          106..514
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..529
                     /gene="TMCC1"
                     /coded_by="XM_041464236.1:424..2013"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mkrgtslhsr wgkgdapkgs pqinrrsaqd iqsgrprsss ttdaptnlsv meiassiyvg
       61 geeaaaaaie rlevsslaqt ssavasstdg sinadsvdgt pdpqrtkvai thlqqkilkl
      121 teqikieqta rddnvaeylk lannadkqqs arikqvfekk nqksaqtilq lqkklehyhr
      181 klreieqngi prqpkdvfrd mhqglkdvga kvtgfsegvv dsvkgglssf sqathsaaga
      241 vvskpreias lirnkfgsad nianlkdsle egqedgtgsk algviqnfqs spkygseedc
      301 ssatsgsvga nsttggpvga sssktntldm qssgfdailh eiqeiretqa rleesfedlk
      361 vryqrdytli mqtlqeeryr cerleeqlnd ltelhqneil nlkqelasme ekiayqsyer
      421 ardiqealea cqtriskmel qqqqqqvvql eglenatarn llgkfinill avmavllvfv
      481 stvancvvpl mktrnrtfst lfivvfiafl wkhwdaitgy lerflsppr
//
LOCUS       XP_041320176             529 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320176
VERSION     XP_041320176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464242.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X2"
                     /calculated_mol_wt=58393
     Region          106..514
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..529
                     /gene="TMCC1"
                     /coded_by="XM_041464242.1:3024..4613"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mkrgtslhsr wgkgdapkgs pqinrrsaqd iqsgrprsss ttdaptnlsv meiassiyvg
       61 geeaaaaaie rlevsslaqt ssavasstdg sinadsvdgt pdpqrtkvai thlqqkilkl
      121 teqikieqta rddnvaeylk lannadkqqs arikqvfekk nqksaqtilq lqkklehyhr
      181 klreieqngi prqpkdvfrd mhqglkdvga kvtgfsegvv dsvkgglssf sqathsaaga
      241 vvskpreias lirnkfgsad nianlkdsle egqedgtgsk algviqnfqs spkygseedc
      301 ssatsgsvga nsttggpvga sssktntldm qssgfdailh eiqeiretqa rleesfedlk
      361 vryqrdytli mqtlqeeryr cerleeqlnd ltelhqneil nlkqelasme ekiayqsyer
      421 ardiqealea cqtriskmel qqqqqqvvql eglenatarn llgkfinill avmavllvfv
      481 stvancvvpl mktrnrtfst lfivvfiafl wkhwdaitgy lerflsppr
//
LOCUS       XP_041320186             529 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320186
VERSION     XP_041320186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X2"
                     /calculated_mol_wt=58393
     Region          106..514
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..529
                     /gene="TMCC1"
                     /coded_by="XM_041464252.1:115..1704"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mkrgtslhsr wgkgdapkgs pqinrrsaqd iqsgrprsss ttdaptnlsv meiassiyvg
       61 geeaaaaaie rlevsslaqt ssavasstdg sinadsvdgt pdpqrtkvai thlqqkilkl
      121 teqikieqta rddnvaeylk lannadkqqs arikqvfekk nqksaqtilq lqkklehyhr
      181 klreieqngi prqpkdvfrd mhqglkdvga kvtgfsegvv dsvkgglssf sqathsaaga
      241 vvskpreias lirnkfgsad nianlkdsle egqedgtgsk algviqnfqs spkygseedc
      301 ssatsgsvga nsttggpvga sssktntldm qssgfdailh eiqeiretqa rleesfedlk
      361 vryqrdytli mqtlqeeryr cerleeqlnd ltelhqneil nlkqelasme ekiayqsyer
      421 ardiqealea cqtriskmel qqqqqqvvql eglenatarn llgkfinill avmavllvfv
      481 stvancvvpl mktrnrtfst lfivvfiafl wkhwdaitgy lerflsppr
//
LOCUS       XP_041320194             482 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320194
VERSION     XP_041320194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X3"
                     /calculated_mol_wt=53831
     Region          59..467
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..482
                     /gene="TMCC1"
                     /coded_by="XM_041464260.1:145..1593"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mfmwccctcv ccerdfcept kierlevssl aqtssavass tdgsinadsv dgtpdpqrtk
       61 vaithlqqki lklteqikie qtarddnvae ylklannadk qqsarikqvf ekknqksaqt
      121 ilqlqkkleh yhrklreieq ngiprqpkdv frdmhqglkd vgakvtgfse gvvdsvkggl
      181 ssfsqathsa agavvskpre iaslirnkfg sadnianlkd sleegqedgt gskalgviqn
      241 fqsspkygse edcssatsgs vgansttggp vgasssktnt ldmqssgfda ilheiqeire
      301 tqarleesfe dlkvryqrdy tlimqtlqee ryrcerleeq lndltelhqn eilnlkqela
      361 smeekiayqs yerardiqea leacqtrisk melqqqqqqv vqleglenat arnllgkfin
      421 illavmavll vfvstvancv vplmktrnrt fstlfivvfi aflwkhwdai tgylerflsp
      481 pr
//
LOCUS       XP_041320202             474 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320202
VERSION     XP_041320202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464268.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X4"
                     /calculated_mol_wt=52871
     Region          51..459
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..474
                     /gene="TMCC1"
                     /coded_by="XM_041464268.1:1415..2839"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mhgerallpr rdkierlevs slaqtssava sstdgsinad svdgtpdpqr tkvaithlqq
       61 kilklteqik ieqtarddnv aeylklanna dkqqsarikq vfekknqksa qtilqlqkkl
      121 ehyhrklrei eqngiprqpk dvfrdmhqgl kdvgakvtgf segvvdsvkg glssfsqath
      181 saagavvskp reiaslirnk fgsadnianl kdsleegqed gtgskalgvi qnfqsspkyg
      241 seedcssats gsvgansttg gpvgassskt ntldmqssgf dailheiqei retqarlees
      301 fedlkvryqr dytlimqtlq eeryrcerle eqlndltelh qneilnlkqe lasmeekiay
      361 qsyerardiq ealeacqtri skmelqqqqq qvvqleglen atarnllgkf inillavmav
      421 llvfvstvan cvvplmktrn rtfstlfivv fiaflwkhwd aitgylerfl sppr
//
LOCUS       XP_041320210             474 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320210
VERSION     XP_041320210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X5"
                     /calculated_mol_wt=52941
     Region          51..459
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..474
                     /gene="TMCC1"
                     /coded_by="XM_041464276.1:16..1440"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mvqrfslrrq lskierlevs slaqtssava sstdgsinad svdgtpdpqr tkvaithlqq
       61 kilklteqik ieqtarddnv aeylklanna dkqqsarikq vfekknqksa qtilqlqkkl
      121 ehyhrklrei eqngiprqpk dvfrdmhqgl kdvgakvtgf segvvdsvkg glssfsqath
      181 saagavvskp reiaslirnk fgsadnianl kdsleegqed gtgskalgvi qnfqsspkyg
      241 seedcssats gsvgansttg gpvgassskt ntldmqssgf dailheiqei retqarlees
      301 fedlkvryqr dytlimqtlq eeryrcerle eqlndltelh qneilnlkqe lasmeekiay
      361 qsyerardiq ealeacqtri skmelqqqqq qvvqleglen atarnllgkf inillavmav
      421 llvfvstvan cvvplmktrn rtfstlfivv fiaflwkhwd aitgylerfl sppr
//
LOCUS       XP_041320219             464 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320219
VERSION     XP_041320219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464285.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X6"
                     /calculated_mol_wt=51702
     Region          41..449
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..464
                     /gene="TMCC1"
                     /coded_by="XM_041464285.1:364..1758"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mmeierlevs slaqtssava sstdgsinad svdgtpdpqr tkvaithlqq kilklteqik
       61 ieqtarddnv aeylklanna dkqqsarikq vfekknqksa qtilqlqkkl ehyhrklrei
      121 eqngiprqpk dvfrdmhqgl kdvgakvtgf segvvdsvkg glssfsqath saagavvskp
      181 reiaslirnk fgsadnianl kdsleegqed gtgskalgvi qnfqsspkyg seedcssats
      241 gsvgansttg gpvgassskt ntldmqssgf dailheiqei retqarlees fedlkvryqr
      301 dytlimqtlq eeryrcerle eqlndltelh qneilnlkqe lasmeekiay qsyerardiq
      361 ealeacqtri skmelqqqqq qvvqleglen atarnllgkf inillavmav llvfvstvan
      421 cvvplmktrn rtfstlfivv fiaflwkhwd aitgylerfl sppr
//
LOCUS       XP_041320228             464 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 1 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320228
VERSION     XP_041320228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="transmembrane and coiled-coil domains protein 1
                     isoform X6"
                     /calculated_mol_wt=51702
     Region          41..449
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..464
                     /gene="TMCC1"
                     /coded_by="XM_041464294.1:92..1486"
                     /db_xref="GeneID:121351834"
ORIGIN      
        1 mmeierlevs slaqtssava sstdgsinad svdgtpdpqr tkvaithlqq kilklteqik
       61 ieqtarddnv aeylklanna dkqqsarikq vfekknqksa qtilqlqkkl ehyhrklrei
      121 eqngiprqpk dvfrdmhqgl kdvgakvtgf segvvdsvkg glssfsqath saagavvskp
      181 reiaslirnk fgsadnianl kdsleegqed gtgskalgvi qnfqsspkyg seedcssats
      241 gsvgansttg gpvgassskt ntldmqssgf dailheiqei retqarlees fedlkvryqr
      301 dytlimqtlq eeryrcerle eqlndltelh qneilnlkqe lasmeekiay qsyerardiq
      361 ealeacqtri skmelqqqqq qvvqleglen atarnllgkf inillavmav llvfvstvan
      421 cvvplmktrn rtfstlfivv fiaflwkhwd aitgylerfl sppr
//
LOCUS       XP_041320254             456 aa            linear   VRT 06-MAY-2021
DEFINITION  ruvB-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320254
VERSION     XP_041320254.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464320.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="ruvB-like 1"
                     /calculated_mol_wt=50061
     Region          14..369
                     /region_name="TIP49"
                     /note="TIP49 P-loop domain; pfam06068"
                     /db_xref="CDD:399217"
     Region          374..439
                     /region_name="TIP49_C"
                     /note="TIP49 AAA-lid domain; pfam17856"
                     /db_xref="CDD:436097"
     CDS             1..456
                     /gene="RUVBL1"
                     /coded_by="XM_041464320.1:110..1480"
                     /db_xref="GeneID:121351885"
ORIGIN      
        1 mkieevksts ktqriaahsh vkglgldesg aakpagaglv gqenareacg vivelikskk
       61 magravllag ppgtgktala laiaqelgsk vpfcpmvgse vysteikkte vlmenfrrai
      121 glriketkev yegevteltp cetenpmggy gktishviig lktakgtkql kldpsifesl
      181 qkervetgdv iyieansgav krqgrcdiya tefdleaeey vplpkgdvhk kkeiiqdvtl
      241 hdldvanarp qggqdilsmm gqlmkpkkte itdklrgein kvvnkyidqg iaelvpgvlf
      301 vdevhmldie cftylhrale ssispivifa snrgnciirg tedivsphgi pldlldrvmi
      361 irtmlytpqe mkqitklraq teginiseea lnhlgeigtk ttlryavqll tpanllakin
      421 gkdsiekehi eeinelfyda kssakiladq qekymk
//
LOCUS       XP_041320267             436 aa            linear   VRT 06-MAY-2021
DEFINITION  fez family zinc finger protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320267
VERSION     XP_041320267.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464333.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="fez family zinc finger protein 2"
                     /calculated_mol_wt=46994
     Region          257..277
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(257,260,273,277)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:275368"
     Site            order(262,264,266,268..269,272..273,276,290,292,296..297,
                     300..301,304,318,320,322,324..325,328..329,332)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <267..428
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          285..305
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          313..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          369..389
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          397..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..436
                     /gene="FEZF2"
                     /coded_by="XM_041464333.1:398..1708"
                     /db_xref="GeneID:121351894"
ORIGIN      
        1 maspgsletv mpsscprhdg raatanpskt lafsierima ktsepkpafe erhggpgpep
       61 gkkplslcsp lpcvipippl gyelpsktln yselwksslr ggaglckanc gvcckaelal
      121 gqpsgrlikp qvihqagavp aaprslyyfn yldaayhpad llhgqlfpag llgapspggl
      181 sahqklflle naklaglaae klpppppfah kerlpghldq vmkeaaaaer ggppkghakm
      241 ggggggaaeg kpknftcevc gkvfnahynl trhmpvhtga rpfvckvcgk gfrqastlcr
      301 hkiihtqekp hkcnqcgkaf nrsstlnthi rihagykpfv cefcgkgfhq kgnyknhklt
      361 hsgekqykct icnkafhqiy nltfhmhthn dkkpftcvtc gkgfcrnfdl kkhvrklhds
      421 vssappprdp grsgqs
//
LOCUS       XP_041320277             131 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C3orf14 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041320277
VERSION     XP_041320277.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464343.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="uncharacterized protein C3orf14 homolog"
                     /calculated_mol_wt=15222
     Region          1..110
                     /region_name="DUF4570"
                     /note="Domain of unknown function (DUF4570); pfam15134"
                     /db_xref="CDD:464520"
     CDS             1..131
                     /gene="CUNH3orf14"
                     /coded_by="XM_041464343.1:427..822"
                     /db_xref="GeneID:121351903"
ORIGIN      
        1 mssclaqevh larrheeils qrsellqqme tylrdkktkk twqtqaadaa hkrnaallnd
       61 ieaaekrlqe rmyllphpdt vkletlywas ikeslpkwee fllgraevpi gfkkmkatkq
      121 sinypeedsq k
//
LOCUS       XP_041320285             131 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C3orf14 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041320285
VERSION     XP_041320285.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464351.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="uncharacterized protein C3orf14 homolog"
                     /calculated_mol_wt=15222
     Region          1..110
                     /region_name="DUF4570"
                     /note="Domain of unknown function (DUF4570); pfam15134"
                     /db_xref="CDD:464520"
     CDS             1..131
                     /gene="CUNH3orf14"
                     /coded_by="XM_041464351.1:125..520"
                     /db_xref="GeneID:121351903"
ORIGIN      
        1 mssclaqevh larrheeils qrsellqqme tylrdkktkk twqtqaadaa hkrnaallnd
       61 ieaaekrlqe rmyllphpdt vkletlywas ikeslpkwee fllgraevpi gfkkmkatkq
      121 sinypeedsq k
//
LOCUS       XP_041320294             131 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C3orf14 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041320294
VERSION     XP_041320294.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464360.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="uncharacterized protein C3orf14 homolog"
                     /calculated_mol_wt=15222
     Region          1..110
                     /region_name="DUF4570"
                     /note="Domain of unknown function (DUF4570); pfam15134"
                     /db_xref="CDD:464520"
     CDS             1..131
                     /gene="CUNH3orf14"
                     /coded_by="XM_041464360.1:542..937"
                     /db_xref="GeneID:121351903"
ORIGIN      
        1 mssclaqevh larrheeils qrsellqqme tylrdkktkk twqtqaadaa hkrnaallnd
       61 ieaaekrlqe rmyllphpdt vkletlywas ikeslpkwee fllgraevpi gfkkmkatkq
      121 sinypeedsq k
//
LOCUS       XP_041320304             131 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C3orf14 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041320304
VERSION     XP_041320304.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464370.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="uncharacterized protein C3orf14 homolog"
                     /calculated_mol_wt=15222
     Region          1..110
                     /region_name="DUF4570"
                     /note="Domain of unknown function (DUF4570); pfam15134"
                     /db_xref="CDD:464520"
     CDS             1..131
                     /gene="CUNH3orf14"
                     /coded_by="XM_041464370.1:353..748"
                     /db_xref="GeneID:121351903"
ORIGIN      
        1 mssclaqevh larrheeils qrsellqqme tylrdkktkk twqtqaadaa hkrnaallnd
       61 ieaaekrlqe rmyllphpdt vkletlywas ikeslpkwee fllgraevpi gfkkmkatkq
      121 sinypeedsq k
//
LOCUS       XP_041320313             131 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C3orf14 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041320313
VERSION     XP_041320313.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464379.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="uncharacterized protein C3orf14 homolog"
                     /calculated_mol_wt=15222
     Region          1..110
                     /region_name="DUF4570"
                     /note="Domain of unknown function (DUF4570); pfam15134"
                     /db_xref="CDD:464520"
     CDS             1..131
                     /gene="CUNH3orf14"
                     /coded_by="XM_041464379.1:309..704"
                     /db_xref="GeneID:121351903"
ORIGIN      
        1 mssclaqevh larrheeils qrsellqqme tylrdkktkk twqtqaadaa hkrnaallnd
       61 ieaaekrlqe rmyllphpdt vkletlywas ikeslpkwee fllgraevpi gfkkmkatkq
      121 sinypeedsq k
//
LOCUS       XP_041320322             131 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C3orf14 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041320322
VERSION     XP_041320322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="uncharacterized protein C3orf14 homolog"
                     /calculated_mol_wt=15222
     Region          1..110
                     /region_name="DUF4570"
                     /note="Domain of unknown function (DUF4570); pfam15134"
                     /db_xref="CDD:464520"
     CDS             1..131
                     /gene="CUNH3orf14"
                     /coded_by="XM_041464388.1:168..563"
                     /db_xref="GeneID:121351903"
ORIGIN      
        1 mssclaqevh larrheeils qrsellqqme tylrdkktkk twqtqaadaa hkrnaallnd
       61 ieaaekrlqe rmyllphpdt vkletlywas ikeslpkwee fllgraevpi gfkkmkatkq
      121 sinypeedsq k
//
LOCUS       XP_041320340             411 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-5 receptor subunit alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041320340
VERSION     XP_041320340.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464406.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="interleukin-5 receptor subunit alpha"
                     /calculated_mol_wt=46253
     Region          127..226
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     CDS             1..411
                     /gene="IL5RA"
                     /coded_by="XM_041464406.1:126..1361"
                     /db_xref="GeneID:121351935"
ORIGIN      
        1 mmasgmsvfl lflwttntpq gagvqvlppv nftltvsala qvllhwepnp aqeqnnstir
       61 ydvkilspep eeydtrrths vrtaalhngf sarvrtlllq edlqmssdwv egnlpplpga
      121 agtsvtnlsc vthvtisgnv plhctwlpgq gapedtkyfl fyryethtee cptytkdkrs
      181 rntecrfsst qikpgeidkl ivihingssk haaikpfqql fnqnaiekvn iprnisisle
      241 qndllamwek pispfheecf eyefylinlk sgnkqilkis snsfwlrvda ssrysirira
      301 khnhlcrasg fwsdwsetiy vgqnkpensi awiltllcvs tsctlllvai icqinhvwsk
      361 lfppiptpsn kfrdpfpidy erartcpsst etevgslaeg lscsvlddsv f
//
LOCUS       XP_041320353             586 aa            linear   VRT 06-MAY-2021
DEFINITION  2',5'-phosphodiesterase 12 [Pyrgilauda ruficollis].
ACCESSION   XP_041320353
VERSION     XP_041320353.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464419.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="2',5'-phosphodiesterase 12"
                     /calculated_mol_wt=63913
     Region          274..585
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(276,326,433,473,475,538,575..576)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(326,575)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(433,475,576)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..586
                     /gene="PDE12"
                     /coded_by="XM_041464419.1:59..1819"
                     /db_xref="GeneID:121351940"
ORIGIN      
        1 mwrrlrsalw slrgslaasp hgggghppaa meravvrcvp sepklslrfv lpdgsarhmq
       61 rdqaeplgra lariatnaak ghgkagkksk karaeggaeg eaavpavrlf srdgaavaee
      121 vpnaaawqdg avlqigdary rvernppalt elrlprslla gfpvcpkvsa efaapqhclf
      181 rwfreqrpag ggeaageawv etaaaervft psnalvglrl klrctpgdge qrygpaleve
      241 ssgpveagpg actfdarhly tkkvcghgsv ravsynilad tyaqtefsrt vlypycapya
      301 leidyrqnll kkelagysad liclqevdks vfvdslapal dafgleglfr ikekqhegla
      361 tfyrrdkfsl lsqhdiafse allseplhke lceqlakypl vqdkvlqrss vlqvsvlqst
      421 tdpsrklcva nthlywhpkg gnirliqtav amshikhvac dlypripvif cgdfnstpss
      481 gaysfissgg iaedhedwvs ngeeercsms lshpfkllsa cgepaytnyv ggfhgcldyi
      541 fidrnaleve qviplpshee itthqalpsv shpsdhiali cdlkwk
//
LOCUS       XP_041320366             432 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320366
VERSION     XP_041320366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="succinate--CoA ligase [GDP-forming] subunit
                     beta, mitochondrial"
                     /calculated_mol_wt=46586
     Region          39..420
                     /region_name="SucC"
                     /note="Succinyl-CoA synthetase, beta subunit [Energy
                     production and conversion]; COG0045"
                     /db_xref="CDD:439815"
     CDS             1..432
                     /gene="SUCLG2"
                     /coded_by="XM_041464432.1:13..1311"
                     /db_xref="GeneID:121351948"
ORIGIN      
        1 maaplagqag avlrdlalrs arlrpefpav qltprrwlnl qeyqskkima dhgvtvqrff
       61 vadsandale aaqrlkakei vlkaqilagg rgkgifnsgl kggvhltkdp ktveqlakqm
      121 igynlstkqt pkdgvtvkkv mvaealdisr etyfailmdr acngpvmvgs pqggvdieev
      181 avtspelifk eeidifegik dhqalqmakn lgfqgplqqq aadqikklyn lflkidatqv
      241 evnpfgetpe gqvvcfdaki nfddnaefrq keifamddks enepieneaa kydlkyigld
      301 gniacfvnga glamatcdii slnggkpanf ldlgggvkea qvyqafkllt adpkveailv
      361 nifggivnca iiangitkac qelelkvplv vrlegtnvne aqrilsesgl pitsandled
      421 aakkavasva kk
//
LOCUS       XP_041320378             416 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1M [Pyrgilauda ruficollis].
ACCESSION   XP_041320378
VERSION     XP_041320378.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464444.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="protein phosphatase 1M"
                     /calculated_mol_wt=46724
     Region          64..410
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     CDS             1..416
                     /gene="PPM1M"
                     /coded_by="XM_041464444.1:16..1266"
                     /db_xref="GeneID:121351958"
ORIGIN      
        1 mglerrgkvq lfagaaeqpc vptpywsvcr vinadksefn edqaaccqis vrrrepglee
       61 deewlilcst qfltghywal fdghggpdaa iiasnylhyc ikqkleeivg giteaqpplh
      121 lsgrcvcdsd pqfveekhih aadlvvgale nafqecdevi gqemeatnqt ggctalaaly
      181 fqgklyvana gdsrailvlk dsivpmssef tpeserqriq hlaflfpkll dgeftrfefp
      241 rrlkgddvgh kvlyrdyfme gwgyktveka dlkyplvhgh gkqarllgtl avsrglgdhq
      301 lkvidtniev kpflscipkv nvfdfavhdi keddvlimat dglwdvlcne evahvvrnfl
      361 aenrtdpqrf selakclvcr argkkkghqw mlddsheasy ddisvfvipl hnreed
//
LOCUS       XP_041320392            1171 aa            linear   VRT 06-MAY-2021
DEFINITION  neural cell adhesion molecule L1-like protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320392
VERSION     XP_041320392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1171
                     /product="neural cell adhesion molecule L1-like protein"
                     /calculated_mol_wt=129334
     Region          35..127
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          53..57
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          66..70
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          91..95
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          107..112
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          121..124
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          136..226
                     /region_name="IgI_2_L1-CAM_like"
                     /note="Second immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains; member
                     of the I-set of Ig superfamily (IgSF) domains; cd05845"
                     /db_xref="CDD:409432"
     Region          136..139
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409432"
     Region          141..145
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409432"
     Region          148..156
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409432"
     Region          163..169
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409432"
     Region          172..175
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409432"
     Region          181..185
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409432"
     Region          187..191
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409432"
     Region          202..210
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409432"
     Region          213..226
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409432"
     Region          263..345
                     /region_name="Ig3_L1-CAM_like"
                     /note="Third immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains;
                     cd05731"
                     /db_xref="CDD:409394"
     Region          275..279
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409394"
     Region          288..292
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409394"
     Region          310..314
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409394"
     Region          324..329
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409394"
     Region          337..340
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409394"
     Region          349..435
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          365..369
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          378..382
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          400..404
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          414..419
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          427..430
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          441..527
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          457..461
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          470..474
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          493..497
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          507..512
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          520..523
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          537..624
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          548..552
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          565..569
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          590..594
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          604..609
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          617..620
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          628..717
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(628,694,709)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(710..711,713..714)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          731..812
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Region          <797..>1024
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          932..1024
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(932,1001,1016)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(1017..1018,1020..1021)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1067..1152
                     /region_name="Bravo_FIGEY"
                     /note="Bravo-like intracellular region; pfam13882"
                     /db_xref="CDD:464016"
     CDS             1..1171
                     /gene="CHL1"
                     /coded_by="XM_041464458.1:297..3812"
                     /db_xref="GeneID:121351965"
ORIGIN      
        1 memllstkgi ticlfffvls laaaieipls vsqlptiteq shtqvaypfd edftikcear
       61 gnpqptfnwt kdgkpfdlss dprivtsnns gtfviqnrgi innfqgkyrc fasnvlgtam
      121 seeielivps vpkfpkekie pldvehgdsv ilhcnppkgi pplhiywmni dlqhipqder
      181 vsmslkgdly fanveesdsr sdyccfaafp rlrtivqkmp mtlkvsrlkh andsgspnaa
      241 vtkanfiker kpkllippes agssssvtvi kggvllleci aeglptphls wvkvtgnmpk
      301 depetenfgk tlkidqvtaa degtyqctas npmgrarhef hvhveeppqw lkkpeggvys
      361 vgtnlvllce aignpepsiq wkingmpidg rtfrgristr eisltnlqlq dsavfqceat
      421 nkhgtilasa nvnvlniapl iltpdeenya tvvgysaflh cdifaspaad vrwtkddsie
      481 plstfryeln kngtleirdt kkedsgsyac waansvgkra itanldirda tklvvtpknp
      541 rvlkshsill kcqaeydshl khsfklswrk dgdelpvnst eggriildrd tlfissvlle
      601 dqgvyrcvas taldtaeaea qlivldvpdp pedlqlsenq nrsvrlswka gashnspvne
      661 siiefeenhw epevwqelir vpgndttall slspyvnyqf rvvsvnavgr sqpskpslry
      721 atppaapdkn penirvease pnemvmkwep lkpmerngpg leykvswrqr gvetdwneel
      781 vkkhslsvrn vptfvpyeik vqavnnlgsg pepnitigys gedvpdaaps gvsvevvnst
      841 lvkvfwfgip rdrvrghlrg ykvswwktrs mldgkrhhpe khfltfvgdr nygmipglep
      901 fsefrltvsa fnsrgdgpes spvvfetpeg vpeqprflri lnfdkdsvtl swglpkkang
      961 hltgyilqyq iinethevga vsnvsvanrs alswrlagls pstkykfyik actakgcgka
     1021 ateegltlaq gayagiyegi stqgwfiglm caialltlll lticfvrrnk ggkysvkeke
     1081 dlhpdpeaqs ikdeifgeys dsdekplkgs lqslngdika tgsadslvdy gegehgmfne
     1141 dgsfigaysg skekgsvest gsstatfplh a
//
LOCUS       XP_041320404             115 aa            linear   VRT 06-MAY-2021
DEFINITION  prokineticin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320404
VERSION     XP_041320404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..115
                     /product="prokineticin-2"
                     /calculated_mol_wt=12454
     Region          25..105
                     /region_name="Prokineticin"
                     /note="pfam06607"
                     /db_xref="CDD:148298"
     CDS             1..115
                     /gene="PROK2"
                     /coded_by="XM_041464470.1:2..349"
                     /db_xref="GeneID:121351969"
ORIGIN      
        1 mrsvrgappa plmllallvl llaaghgavi tgacdrdqqc gggmccavsl wirslrmctp
       61 mgnlgdechp lshrvpfsgr rmhhtcpclp glaclrtphs rfrclpdfrk edvff
//
LOCUS       XP_041320413            1691 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TASOR isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320413
VERSION     XP_041320413.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464479.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1691
                     /product="protein TASOR isoform X1"
                     /calculated_mol_wt=189667
     Region          184..336
                     /region_name="DUF3715"
                     /note="Protein of unknown function (DUF3715); pfam12509"
                     /db_xref="CDD:463613"
     Region          1038..1113
                     /region_name="TASOR_PBD"
                     /note="periphilin binding domain of protein TASOR and
                     similar proteins; cd22569"
                     /db_xref="CDD:439336"
     Site            order(1038,1040..1042,1044..1045,1048..1049,1052..1053,
                     1055..1056,1059..1060,1063..1064,1067,1069..1076,1096,
                     1098..1102,1105..1106,1108..1109,1112..1113)
                     /site_type="other"
                     /note="periphilin binding site [polypeptide binding]"
                     /db_xref="CDD:439336"
     CDS             1..1691
                     /gene="TASOR"
                     /coded_by="XM_041464479.1:121..5196"
                     /db_xref="GeneID:121351978"
ORIGIN      
        1 madavirsgs emepeqhqrm ektnagvlgv esnragaaed ttqnggrses gsageallva
       61 avaaedkvpt nlsissssqr rssistaneq qqppsgvlgg ppplpkpsed qqpvrrnfqi
      121 prksrekkal fqpvhpgsre fegiikilhs syldsnsvsn fkyrkaslvh sellekefte
      181 krrqlksdgh lekelsesya flmvdrcqiq sicekglqvg hskitilgsp smgvyiskya
      241 dllqpnplep gasgdvivfk iikgkmksvy dhigmkames tvksvldptp khechvskna
      301 akvtsllayr ayeltqyyfy eydfdeirqr prhvcpyava sfiykedmvq gpkfgppsra
      361 nsfhadrnae tpnvtlwrgq lwnkgklvch vslksaarlf lpcklpekle vekvvsidql
      421 kkkispalfl ketyqerkev wkngvycsly evveksrsgs hlegllqkle keklvlvkpl
      481 vdrgflflls pwqmmspydh qtgrsrvlha lflfpqsrgv insaqksvsy gtqknsatvv
      541 lhekkeivae ftklvpalyf alircrrhss vdyycgkaha vvekyiheyf kklyngpgrg
      601 reftfheyst rlddkrflhp apkhkgdidr ylkkyvfsqe ayqlpvcrak elldrnrkpq
      661 rfsplsdyea tedysdfaka kcrkrihpky eatvvkkkvp pfgdydterl kdlinliqcr
      721 kknvggdsds edprirsglk rklekqsens qkylkmsdss enicqceggr tldsphyvfs
      781 tnsdhggheg dlgqadvsda aadpeglira lletlapasp wdpalaqsvt qalalgteei
      841 eeylrqnygy esipaqdrqd helpnaaqad svpftdlqsp avletdvpcl pypvdvslql
      901 ppneapleht lhlqeassgs tfedcspcps apiehgylrq hpcpnsvgev gmhwklipit
      961 glkspeeple ylpptdalpn dprvvnrqrn sdyqlpcspf sdtqkgtaed ghytgqvekl
     1021 edqyeltdqp ltakhsisav ietalleeyk lfarkieeml qqknipyvsd mstpvlsaqe
     1081 rimrlsqhic lqaseisvqe yiesliekln nvifasscvk qtlpvysspe alevvsstap
     1141 ggpntlavcp eplcndlgqe lhsheqpsas lplgkekmsh gnakpedqta sggdlmeppe
     1201 ktqkspknfn istqpyysnl isklkpevlt qlvkiiedvq kntlkfyihe eeesvlcrei
     1261 keylkrlgnt echpeeflkr rdnsdkllii iqnedianli hkipglvtlk rfscvsfagv
     1321 dslddvknht yndlfvsggf vvsdesvlnp esittdklkq fltfledlnt pdgkwqwkvh
     1381 ckiqkklkel grmnanaldl ltllntyekk ylveilsyhn cdsqtrnape ldclirlqaq
     1441 nikqrhvvfl teknlqtlss yvdngivvaa vddfmhnfks lvgfnntvte qnhlascsag
     1501 qrqsvlvekd ekdeedmsld sgdelaeiei csgaskydth vealhaeakg phgvdakesc
     1561 lsvteltpea qtglgektyk tgleekqpit tvsttcsaeg ekhnaveqtp fsnfqvysrp
     1621 lnmshqfshf nvlthqtflg ttypispanq nqegsnyfls aynqsmdtek ssspggwdsc
     1681 cdssrpyseq k
//
LOCUS       XP_041320422            1650 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TASOR isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320422
VERSION     XP_041320422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1650
                     /product="protein TASOR isoform X2"
                     /calculated_mol_wt=185044
     Region          184..336
                     /region_name="DUF3715"
                     /note="Protein of unknown function (DUF3715); pfam12509"
                     /db_xref="CDD:463613"
     Region          997..1072
                     /region_name="TASOR_PBD"
                     /note="periphilin binding domain of protein TASOR and
                     similar proteins; cd22569"
                     /db_xref="CDD:439336"
     Site            order(997,999..1001,1003..1004,1007..1008,1011..1012,
                     1014..1015,1018..1019,1022..1023,1026,1028..1035,1055,
                     1057..1061,1064..1065,1067..1068,1071..1072)
                     /site_type="other"
                     /note="periphilin binding site [polypeptide binding]"
                     /db_xref="CDD:439336"
     CDS             1..1650
                     /gene="TASOR"
                     /coded_by="XM_041464488.1:121..5073"
                     /db_xref="GeneID:121351978"
ORIGIN      
        1 madavirsgs emepeqhqrm ektnagvlgv esnragaaed ttqnggrses gsageallva
       61 avaaedkvpt nlsissssqr rssistaneq qqppsgvlgg ppplpkpsed qqpvrrnfqi
      121 prksrekkal fqpvhpgsre fegiikilhs syldsnsvsn fkyrkaslvh sellekefte
      181 krrqlksdgh lekelsesya flmvdrcqiq sicekglqvg hskitilgsp smgvyiskya
      241 dllqpnplep gasgdvivfk iikgkmksvy dhigmkames tvksvldptp khechvskna
      301 akvtsllayr ayeltqyyfy eydfdeirqr prhvcpyava sfiykedmvq gpkfgppsra
      361 nsfhadrnae tpnvtlwrgq lwnkgklvch vslksaarlf lpcklpekle vekvvsidql
      421 kkkispalfl ketyqerkev wkngvycsly evveksrsgs hlegllqkle keklvlvkpl
      481 vdrgflflls pwqmmspydh qtgrsrvlha lflfpqsrgv insaqksvsy gtqknsatvv
      541 lhekkeivae ftklvpalyf alircrrhss vdyycgkaha vvekyiheyf kklyngpgrg
      601 reftfheyst rlddkrflhp apkhkgdidr ylkkyvfsqe ayqlpvcrak elldrnrkpq
      661 rfsplsdyea tedysdfaka kcrkrihpky eatvvkkkvp pfgdydterl kdlinliqcr
      721 kknvggdsds edprirsglk rklekqsens qkylkmsdss enicqceggr tldsphyvfs
      781 tnsdhggheg dlgqadvsda aadpeglira lletlapasp wdpalaqsvt qalalgteei
      841 eeylrqnygy esipaqdrqd helpnaaqad svpftdlqsp avletdvpcl pypvdvslql
      901 ppneapleht lhlqeassgs tfedcspcps apiehgylrq hpcpnsvgev gmhwklipit
      961 dtqkgtaedg hytgqvekle dqyeltdqpl takhsisavi etalleeykl farkieemlq
     1021 qknipyvsdm stpvlsaqer imrlsqhicl qaseisvqey ieslieklnn vifasscvkq
     1081 tlpvysspea levvsstapg gpntlavcpe plcndlgqel hsheqpsasl plgkekmshg
     1141 nakpedqtas ggdlmeppek tqkspknfni stqpyysnli sklkpevltq lvkiiedvqk
     1201 ntlkfyihee eesvlcreik eylkrlgnte chpeeflkrr dnsdklliii qnedianlih
     1261 kipglvtlkr fscvsfagvd slddvknhty ndlfvsggfv vsdesvlnpe sittdklkqf
     1321 ltfledlntp dgkwqwkvhc kiqkklkelg rmnanaldll tllntyekky lveilsyhnc
     1381 dsqtrnapel dclirlqaqn ikqrhvvflt eknlqtlssy vdngivvaav ddfmhnfksl
     1441 vgfnntvteq nhlascsagq rqsvlvekde kdeedmslds gdelaeieic sgaskydthv
     1501 ealhaeakgp hgvdakescl svteltpeaq tglgektykt gleekqpitt vsttcsaege
     1561 khnaveqtpf snfqvysrpl nmshqfshfn vlthqtflgt typispanqn qegsnyflsa
     1621 ynqsmdteks sspggwdscc dssrpyseqk
//
LOCUS       XP_041320430            1633 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TASOR isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041320430
VERSION     XP_041320430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1633
                     /product="protein TASOR isoform X3"
                     /calculated_mol_wt=183453
     Region          184..336
                     /region_name="DUF3715"
                     /note="Protein of unknown function (DUF3715); pfam12509"
                     /db_xref="CDD:463613"
     Region          1038..1113
                     /region_name="TASOR_PBD"
                     /note="periphilin binding domain of protein TASOR and
                     similar proteins; cd22569"
                     /db_xref="CDD:439336"
     Site            order(1038,1040..1042,1044..1045,1048..1049,1052..1053,
                     1055..1056,1059..1060,1063..1064,1067,1069..1076,1096,
                     1098..1102,1105..1106,1108..1109,1112..1113)
                     /site_type="other"
                     /note="periphilin binding site [polypeptide binding]"
                     /db_xref="CDD:439336"
     CDS             1..1633
                     /gene="TASOR"
                     /coded_by="XM_041464496.1:121..5022"
                     /db_xref="GeneID:121351978"
ORIGIN      
        1 madavirsgs emepeqhqrm ektnagvlgv esnragaaed ttqnggrses gsageallva
       61 avaaedkvpt nlsissssqr rssistaneq qqppsgvlgg ppplpkpsed qqpvrrnfqi
      121 prksrekkal fqpvhpgsre fegiikilhs syldsnsvsn fkyrkaslvh sellekefte
      181 krrqlksdgh lekelsesya flmvdrcqiq sicekglqvg hskitilgsp smgvyiskya
      241 dllqpnplep gasgdvivfk iikgkmksvy dhigmkames tvksvldptp khechvskna
      301 akvtsllayr ayeltqyyfy eydfdeirqr prhvcpyava sfiykedmvq gpkfgppsra
      361 nsfhadrnae tpnvtlwrgq lwnkgklvch vslksaarlf lpcklpekle vekvvsidql
      421 kkkispalfl ketyqerkev wkngvycsly evveksrsgs hlegllqkle keklvlvkpl
      481 vdrgflflls pwqmmspydh qtgrsrvlha lflfpqsrgv insaqksvsy gtqknsatvv
      541 lhekkeivae ftklvpalyf alircrrhss vdyycgkaha vvekyiheyf kklyngpgrg
      601 reftfheyst rlddkrflhp apkhkgdidr ylkkyvfsqe ayqlpvcrak elldrnrkpq
      661 rfsplsdyea tedysdfaka kcrkrihpky eatvvkkkvp pfgdydterl kdlinliqcr
      721 kknvggdsds edprirsglk rklekqsens qkylkmsdss enicqceggr tldsphyvfs
      781 tnsdhggheg dlgqadvsda aadpeglira lletlapasp wdpalaqsvt qalalgteei
      841 eeylrqnygy esipaqdrqd helpnaaqad svpftdlqsp avletdvpcl pypvdvslql
      901 ppneapleht lhlqeassgs tfedcspcps apiehgylrq hpcpnsvgev gmhwklipit
      961 glkspeeple ylpptdalpn dprvvnrqrn sdyqlpcspf sdtqkgtaed ghytgqvekl
     1021 edqyeltdqp ltakhsisav ietalleeyk lfarkieeml qqknipyvsd mstpvlsaqe
     1081 rimrlsqhic lqaseisvqe yiesliekln nvifasscvk qtlpvysspe alevvsstap
     1141 ggpntlavcp eplcndlgqe lhsheqpsas lplgkekmsh gnakpedqta sggdlmeppe
     1201 ktqkspknfn istqpyysnl isklkpevlt qlvkiiedvq kntlkfyihe eeesvlcrei
     1261 keylkrlgnt echpeeflkr rdnsdkllii iqnedianli hkipglvtlk rfscvsfagv
     1321 dslddvknht yndlfvsggf vvsdesvlnp esittdklkq fltfledlnt pdgkwqwkvh
     1381 ckiqkklkel grmnanaldl ltllntyekk ylveilsyhn cdsqtrnape ldclirlqaq
     1441 nikqrhvvfl teknlqtlss yvdngivvaa vddfmhnfks lvgfnntvte qnhlascsag
     1501 qrqsvteltp eaqtglgekt yktgleekqp ittvsttcsa egekhnaveq tpfsnfqvys
     1561 rplnmshqfs hfnvlthqtf lgttypispa nqnqegsnyf lsaynqsmdt ekssspggwd
     1621 sccdssrpys eqk
//
LOCUS       XP_041320442            1541 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TASOR isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041320442
VERSION     XP_041320442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1541
                     /product="protein TASOR isoform X4"
                     /calculated_mol_wt=173216
     Region          184..336
                     /region_name="DUF3715"
                     /note="Protein of unknown function (DUF3715); pfam12509"
                     /db_xref="CDD:463613"
     Region          1038..1113
                     /region_name="TASOR_PBD"
                     /note="periphilin binding domain of protein TASOR and
                     similar proteins; cd22569"
                     /db_xref="CDD:439336"
     Site            order(1038,1040..1042,1044..1045,1048..1049,1052..1053,
                     1055..1056,1059..1060,1063..1064,1067,1069..1076,1096,
                     1098..1102,1105..1106,1108..1109,1112..1113)
                     /site_type="other"
                     /note="periphilin binding site [polypeptide binding]"
                     /db_xref="CDD:439336"
     CDS             1..1541
                     /gene="TASOR"
                     /coded_by="XM_041464508.1:121..4746"
                     /db_xref="GeneID:121351978"
ORIGIN      
        1 madavirsgs emepeqhqrm ektnagvlgv esnragaaed ttqnggrses gsageallva
       61 avaaedkvpt nlsissssqr rssistaneq qqppsgvlgg ppplpkpsed qqpvrrnfqi
      121 prksrekkal fqpvhpgsre fegiikilhs syldsnsvsn fkyrkaslvh sellekefte
      181 krrqlksdgh lekelsesya flmvdrcqiq sicekglqvg hskitilgsp smgvyiskya
      241 dllqpnplep gasgdvivfk iikgkmksvy dhigmkames tvksvldptp khechvskna
      301 akvtsllayr ayeltqyyfy eydfdeirqr prhvcpyava sfiykedmvq gpkfgppsra
      361 nsfhadrnae tpnvtlwrgq lwnkgklvch vslksaarlf lpcklpekle vekvvsidql
      421 kkkispalfl ketyqerkev wkngvycsly evveksrsgs hlegllqkle keklvlvkpl
      481 vdrgflflls pwqmmspydh qtgrsrvlha lflfpqsrgv insaqksvsy gtqknsatvv
      541 lhekkeivae ftklvpalyf alircrrhss vdyycgkaha vvekyiheyf kklyngpgrg
      601 reftfheyst rlddkrflhp apkhkgdidr ylkkyvfsqe ayqlpvcrak elldrnrkpq
      661 rfsplsdyea tedysdfaka kcrkrihpky eatvvkkkvp pfgdydterl kdlinliqcr
      721 kknvggdsds edprirsglk rklekqsens qkylkmsdss enicqceggr tldsphyvfs
      781 tnsdhggheg dlgqadvsda aadpeglira lletlapasp wdpalaqsvt qalalgteei
      841 eeylrqnygy esipaqdrqd helpnaaqad svpftdlqsp avletdvpcl pypvdvslql
      901 ppneapleht lhlqeassgs tfedcspcps apiehgylrq hpcpnsvgev gmhwklipit
      961 glkspeeple ylpptdalpn dprvvnrqrn sdyqlpcspf sdtqkgtaed ghytgqvekl
     1021 edqyeltdqp ltakhsisav ietalleeyk lfarkieeml qqknipyvsd mstpvlsaqe
     1081 rimrlsqhic lqaseisvqe yiesliekln nvifasscvk qtlpvysspe alevvsstap
     1141 ggpntlavcp eplcndlgqe lhsheqpsas lplgkekmsh gnakpedqta sggdlmeppe
     1201 ktqkspknfn istqpyysnl isklkpevlt qlvkiiedvq kntlkfyihe eeesvlcrei
     1261 keylkrlgnt echpeeflkr rdnsdkllii iqnedianli hkipglvtlk rfscvsfagv
     1321 dslddvknht yndlfvsggf vvsdesvlnp esittdklkq fltfledlnt pdgkwqwkvh
     1381 ckiqkklkel grmnanaldl ltllntyekk ylveilsyhn cdsqtrnape ldclirlqaq
     1441 nikqrhvvfl teknlqtlss yvdngivvaa vddfmhnfks lvgfnntvte qnhlascsag
     1501 qrqsvlvekd ekdeedmsld sgdelaeiei csgasnyrvn s
//
LOCUS       XP_041320454            1522 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TASOR isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041320454
VERSION     XP_041320454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1522
                     /product="protein TASOR isoform X5"
                     /calculated_mol_wt=170975
     Region          184..336
                     /region_name="DUF3715"
                     /note="Protein of unknown function (DUF3715); pfam12509"
                     /db_xref="CDD:463613"
     Region          1038..1113
                     /region_name="TASOR_PBD"
                     /note="periphilin binding domain of protein TASOR and
                     similar proteins; cd22569"
                     /db_xref="CDD:439336"
     Site            order(1038,1040..1042,1044..1045,1048..1049,1052..1053,
                     1055..1056,1059..1060,1063..1064,1067,1069..1076,1096,
                     1098..1102,1105..1106,1108..1109,1112..1113)
                     /site_type="other"
                     /note="periphilin binding site [polypeptide binding]"
                     /db_xref="CDD:439336"
     CDS             1..1522
                     /gene="TASOR"
                     /coded_by="XM_041464520.1:121..4689"
                     /db_xref="GeneID:121351978"
ORIGIN      
        1 madavirsgs emepeqhqrm ektnagvlgv esnragaaed ttqnggrses gsageallva
       61 avaaedkvpt nlsissssqr rssistaneq qqppsgvlgg ppplpkpsed qqpvrrnfqi
      121 prksrekkal fqpvhpgsre fegiikilhs syldsnsvsn fkyrkaslvh sellekefte
      181 krrqlksdgh lekelsesya flmvdrcqiq sicekglqvg hskitilgsp smgvyiskya
      241 dllqpnplep gasgdvivfk iikgkmksvy dhigmkames tvksvldptp khechvskna
      301 akvtsllayr ayeltqyyfy eydfdeirqr prhvcpyava sfiykedmvq gpkfgppsra
      361 nsfhadrnae tpnvtlwrgq lwnkgklvch vslksaarlf lpcklpekle vekvvsidql
      421 kkkispalfl ketyqerkev wkngvycsly evveksrsgs hlegllqkle keklvlvkpl
      481 vdrgflflls pwqmmspydh qtgrsrvlha lflfpqsrgv insaqksvsy gtqknsatvv
      541 lhekkeivae ftklvpalyf alircrrhss vdyycgkaha vvekyiheyf kklyngpgrg
      601 reftfheyst rlddkrflhp apkhkgdidr ylkkyvfsqe ayqlpvcrak elldrnrkpq
      661 rfsplsdyea tedysdfaka kcrkrihpky eatvvkkkvp pfgdydterl kdlinliqcr
      721 kknvggdsds edprirsglk rklekqsens qkylkmsdss enicqceggr tldsphyvfs
      781 tnsdhggheg dlgqadvsda aadpeglira lletlapasp wdpalaqsvt qalalgteei
      841 eeylrqnygy esipaqdrqd helpnaaqad svpftdlqsp avletdvpcl pypvdvslql
      901 ppneapleht lhlqeassgs tfedcspcps apiehgylrq hpcpnsvgev gmhwklipit
      961 glkspeeple ylpptdalpn dprvvnrqrn sdyqlpcspf sdtqkgtaed ghytgqvekl
     1021 edqyeltdqp ltakhsisav ietalleeyk lfarkieeml qqknipyvsd mstpvlsaqe
     1081 rimrlsqhic lqaseisvqe yiesliekln nvifasscvk qtlpvysspe alevvsstap
     1141 ggpntlavcp eplcndlgqe lhsheqpsas lplgkekmsh gnakpedqta sggdlmeppe
     1201 ktqkspknfn istqpyysnl isklkpevlt qlvkiiedvq kntlkfyihe eeesvlcrei
     1261 keylkrlgnt echpeeflkr rdnsdkllii iqnedianli hkipglvtlk rfscvsfagv
     1321 dslddvknht yndlfvsggf vvsdesvlnp esittdklkq fltfledlnt pdgkwqwkvh
     1381 ckiqkklkel grmnanaldl ltllntyekk ylveilsyhn cdsqtrnape ldclirlqaq
     1441 nikqrhvvfl teknlqtlss yvdngivvaa vddfmhnfks lvgfnntvte qnhlascsag
     1501 qrqsdavltl splelgvgis qh
//
LOCUS       XP_041320465             539 aa            linear   VRT 06-MAY-2021
DEFINITION  protein RFT1 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041320465
VERSION     XP_041320465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..539
                     /product="protein RFT1 homolog"
                     /calculated_mol_wt=60548
     Region          9..523
                     /region_name="Rft-1"
                     /note="Rft protein; pfam04506"
                     /db_xref="CDD:427987"
     CDS             1..539
                     /gene="RFT1"
                     /coded_by="XM_041464531.1:134..1753"
                     /db_xref="GeneID:121352006"
ORIGIN      
        1 maaqdvlgqt arlasssall qvlfrvvtfg lnaftlryls religvvnvr ltllystvvf
       61 lareafrrac lsgsakrnwt ktinllwltv plgvfwslil glvwlhllev pdpsvvphyq
      121 agvvafglsa iiellgepfw vlaqahlfvr lkviaeslsv vskciltvtl vilypqwgly
      181 ifslaqllya svlvmcyviy fvmflgspea tkksfpvarv kallpsfved etfvnwkear
      241 ltwsffkqsf lkqilteger yvmtflnvln fgdqgvydiv nnlgslvarf iflpveesfy
      301 vffakvlerg ktvkdqkqdd vamaanvlel llklvlligf titvfgyays qlaldiyggs
      361 mlssgtgpnl lrcyslyvlf lavngvtecf tsalmckeev drynfvmlal sfiflcisyf
      421 lthwygsvgf ilancfnmgi riahsthyih hyfresthrp ltgllpspal llvyilsavv
      481 tafsevlfcc dkgwmarlih istgalclaa tlvtmfctet klihfvrsqf lsrylkkgt
//
LOCUS       XP_041320477             206 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox expressed in ES cells 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320477
VERSION     XP_041320477.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464543.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="homeobox expressed in ES cells 1 isoform X1"
                     /calculated_mol_wt=23419
     Region          130..186
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..206
                     /gene="HESX1"
                     /coded_by="XM_041464543.1:382..1002"
                     /db_xref="GeneID:121352015"
ORIGIN      
        1 mlaegegmag pslcaaataa spdrhkvpgf gdsktthcsf siesilgleq kkegiaagkp
       61 hrpwmdacts lvlgddsnph lqipvvcyen plfntrsdpv qeenvlkcek yfsvterlsf
      121 krelswyrgr rprtaftrnq ievlenvfkm nsypgidire elarkldlde driqiwfqnr
      181 raklkrshre sqflmvkntf tsslle
//
LOCUS       XP_041320486             184 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox expressed in ES cells 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320486
VERSION     XP_041320486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="homeobox expressed in ES cells 1 isoform X2"
                     /calculated_mol_wt=21643
     Region          108..164
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..184
                     /gene="HESX1"
                     /coded_by="XM_041464552.1:36..590"
                     /db_xref="GeneID:121352015"
ORIGIN      
        1 mcalmektfc lcwrvkvaew isilgleqkk egiaagkphr pwmdactslv lgddsnphlq
       61 ipvvcyenpl fntrsdpvqe envlkcekyf svterlsfkr elswyrgrrp rtaftrnqie
      121 vlenvfkmns ypgidireel arkldldedr iqiwfqnrra klkrshresq flmvkntfts
      181 slle
//
LOCUS       XP_041320502             608 aa            linear   VRT 06-MAY-2021
DEFINITION  choline dehydrogenase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041320502
VERSION     XP_041320502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="choline dehydrogenase, mitochondrial"
                     /calculated_mol_wt=67775
     Region          51..608
                     /region_name="PRK02106"
                     /note="choline dehydrogenase; Validated"
                     /db_xref="CDD:235000"
     CDS             1..608
                     /gene="CHDH"
                     /coded_by="XM_041464568.1:1..1827"
                     /db_xref="GeneID:121352022"
ORIGIN      
        1 msyltkgfkc hspvmckvag slfkahalkn afgineqfki srassqlsse kansynyiiv
       61 gagsagcvla nrltedpqst vllleagpkd tllgskrlmw kihmpaalty nlcdekynwc
      121 yhtapqrhme grvmywprgr vwggssslna mvyirghaed ynrwsregal gwdyehclpy
      181 fkkaqthelg pdqyrggngp lhvsrgktnh plhqafleaa qqagypftdd mngyqqegfg
      241 wmdmtvhqgq rwstasaylr paisrpnfsv aektfvtqil fqgtkcigie yvkngqrkkv
      301 fankevilsa gainspqllm lsgignaddl kklgipvvch lpgvgqnlqd hlevyvqqkc
      361 tkpitlysaq kplnmvrigl ewlwkftgeg atahlesggf irsepgvpyp diqfhflpsq
      421 vidhgrvast meayqvhvgp mrstsvgwlk lkssdpkdhp iiepnylste rdvwefrqcv
      481 kltreifaqk afekfrgpei qpgnhvqsde eidafirqka dtayhpsctc kmgqpsdsta
      541 vvdpqtkvig venlrvvdas impsvvtgnl naptimiaek aadiikglps lqeknvpvyk
      601 pktletqr
//
LOCUS       XP_041320515             709 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor-associated kinase-like 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320515
VERSION     XP_041320515.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464581.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="interleukin-1 receptor-associated kinase-like 2
                     isoform X1"
                     /calculated_mol_wt=77868
     Region          19..105
                     /region_name="Death_IRAK2"
                     /note="Death domain of Interleukin 1 Receptor Associated
                     Kinase-2; cd08795"
                     /db_xref="CDD:176773"
     Site            order(20..21,23..26,59,66..67,72..73,76..82,87)
                     /site_type="other"
                     /note="IRAK2-IRAK4 interaction site [polypeptide binding]"
                     /db_xref="CDD:176773"
     Region          231..519
                     /region_name="STKc_IRAK2"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Interleukin-1 Receptor Associated Kinase 2; cd14157"
                     /db_xref="CDD:271059"
     Site            order(231..235,239,250,252,285,301..304,308,310,350,352,
                     354..355,357,368,371,392..395)
                     /site_type="active"
                     /db_xref="CDD:271059"
     Site            order(231..235,239,250,252,285,301..304,308,350,352,
                     354..355,357,368)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271059"
     Site            order(235,308,310,350,352,354,371,392..395)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271059"
     Site            order(367..375,377..395)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271059"
     CDS             1..709
                     /gene="IRAK2"
                     /coded_by="XM_041464581.1:299..2428"
                     /db_xref="GeneID:121352026"
ORIGIN      
        1 malpqpplap ragsapalyi hsmpawvled fcqkmdclsd ydwmrfasyv itdqtelrki
       61 kcmektgisi trelmwwwgv rlatvqqlld llqglqlyra aqvildwtsa ssitlpekee
      121 peppkqivsv pptegkrsdk esalsllpsp dsshlgaaps gisgavsega lyslpapppp
      181 prdllnslqs nppvlssvkq etmadlpsgs llwtqreian atnsfsdknr icegafadvy
      241 kgqrnnvvlv vkrlkelect spnstqrffh tevqicfrcc hinilqllgf sveagshcli
      301 yphlpngslq nklqchddsa pltwemriri slgvvravey lhnfgilhgn ikssnvllde
      361 nftpklghsg lrlqssdkks eyammktkvl qaslsylped firhgqltek vdifscgvvl
      421 aeiltgikal dedrnpihlk dmiadeiqta kessnskvkn leklaakeic ckyldrkagh
      481 lleevavdfa saiclclrkk nsniaevrem memaenklre hyvcgsstsg fsmntpeetd
      541 detasvsvdv psaegnkees sqaavpslaa vaphtcgiyv srvpcesdes ssflwdppek
      601 pteespshkc sssdraagcd yglrqgkpaq glqesslaca rgdgilepaa aaqgtcpqgn
      661 tdpdsacapq alaretswki qindqkkklm enillyeedk lnsselfes
//
LOCUS       XP_041320523             708 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor-associated kinase-like 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320523
VERSION     XP_041320523.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464589.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="interleukin-1 receptor-associated kinase-like 2
                     isoform X2"
                     /calculated_mol_wt=77740
     Region          19..105
                     /region_name="Death_IRAK2"
                     /note="Death domain of Interleukin 1 Receptor Associated
                     Kinase-2; cd08795"
                     /db_xref="CDD:176773"
     Site            order(20..21,23..26,59,66..67,72..73,76..82,87)
                     /site_type="other"
                     /note="IRAK2-IRAK4 interaction site [polypeptide binding]"
                     /db_xref="CDD:176773"
     Region          230..518
                     /region_name="STKc_IRAK2"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Interleukin-1 Receptor Associated Kinase 2; cd14157"
                     /db_xref="CDD:271059"
     Site            order(230..234,238,249,251,284,300..303,307,309,349,351,
                     353..354,356,367,370,391..394)
                     /site_type="active"
                     /db_xref="CDD:271059"
     Site            order(230..234,238,249,251,284,300..303,307,349,351,
                     353..354,356,367)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271059"
     Site            order(234,307,309,349,351,353,370,391..394)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271059"
     Site            order(366..374,376..394)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271059"
     CDS             1..708
                     /gene="IRAK2"
                     /coded_by="XM_041464589.1:299..2425"
                     /db_xref="GeneID:121352026"
ORIGIN      
        1 malpqpplap ragsapalyi hsmpawvled fcqkmdclsd ydwmrfasyv itdqtelrki
       61 kcmektgisi trelmwwwgv rlatvqqlld llqglqlyra aqvildwtsa ssitlpekee
      121 peppkqivsv pptegkrsdk esalsllpsp dsshlgaaps gisgavsega lyslpapppp
      181 prdllnslqs nppvlssvke tmadlpsgsl lwtqreiana tnsfsdknri cegafadvyk
      241 gqrnnvvlvv krlkelects pnstqrffht evqicfrcch inilqllgfs veagshcliy
      301 phlpngslqn klqchddsap ltwemriris lgvvraveyl hnfgilhgni kssnvllden
      361 ftpklghsgl rlqssdkkse yammktkvlq aslsylpedf irhgqltekv difscgvvla
      421 eiltgikald edrnpihlkd miadeiqtak essnskvknl eklaakeicc kyldrkaghl
      481 leevavdfas aiclclrkkn sniaevremm emaenklreh yvcgsstsgf smntpeetdd
      541 etasvsvdvp saegnkeess qaavpslaav aphtcgiyvs rvpcesdess sflwdppekp
      601 teespshkcs ssdraagcdy glrqgkpaqg lqesslacar gdgilepaaa aqgtcpqgnt
      661 dpdsacapqa laretswkiq indqkkklme nillyeedkl nsselfes
//
LOCUS       XP_041320532             717 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor-associated kinase-like 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041320532
VERSION     XP_041320532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464598.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..717
                     /product="interleukin-1 receptor-associated kinase-like 2
                     isoform X3"
                     /calculated_mol_wt=78626
     Region          19..105
                     /region_name="Death_IRAK2"
                     /note="Death domain of Interleukin 1 Receptor Associated
                     Kinase-2; cd08795"
                     /db_xref="CDD:176773"
     Site            order(20..21,23..26,59,66..67,72..73,76..82,87)
                     /site_type="other"
                     /note="IRAK2-IRAK4 interaction site [polypeptide binding]"
                     /db_xref="CDD:176773"
     Region          239..527
                     /region_name="STKc_IRAK2"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Interleukin-1 Receptor Associated Kinase 2; cd14157"
                     /db_xref="CDD:271059"
     Site            order(239..243,247,258,260,293,309..312,316,318,358,360,
                     362..363,365,376,379,400..403)
                     /site_type="active"
                     /db_xref="CDD:271059"
     Site            order(239..243,247,258,260,293,309..312,316,358,360,
                     362..363,365,376)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271059"
     Site            order(243,316,318,358,360,362,379,400..403)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271059"
     Site            order(375..383,385..403)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271059"
     CDS             1..717
                     /gene="IRAK2"
                     /coded_by="XM_041464598.1:315..2468"
                     /db_xref="GeneID:121352026"
ORIGIN      
        1 malpqpplap ragsapalyi hsmpawvled fcqkmdclsd ydwmrfasyv itdqtelrki
       61 kcmektgisi trelmwwwgv rlatvqqlld llqglqlyra aqvildwtsa ssitlpekee
      121 peppkqivsv pptegkrsdk esalsllpsp dsshlgaaps gisgavsega lyslpapppp
      181 prdllnslqs nppvlssvkp csssapqqet madlpsgsll wtqreianat nsfsdknric
      241 egafadvykg qrnnvvlvvk rlkelectsp nstqrffhte vqicfrcchi nilqllgfsv
      301 eagshcliyp hlpngslqnk lqchddsapl twemririsl gvvraveylh nfgilhgnik
      361 ssnvlldenf tpklghsglr lqssdkksey ammktkvlqa slsylpedfi rhgqltekvd
      421 ifscgvvlae iltgikalde drnpihlkdm iadeiqtake ssnskvknle klaakeicck
      481 yldrkaghll eevavdfasa iclclrkkns niaevremme maenklrehy vcgsstsgfs
      541 mntpeetdde tasvsvdvps aegnkeessq aavpslaava phtcgiyvsr vpcesdesss
      601 flwdppekpt eespshkcss sdraagcdyg lrqgkpaqgl qesslacarg dgilepaaaa
      661 qgtcpqgntd pdsacapqal aretswkiqi ndqkkklmen illyeedkln sselfes
//
LOCUS       XP_041320545             255 aa            linear   VRT 06-MAY-2021
DEFINITION  thyrotropin releasing hormone [Pyrgilauda ruficollis].
ACCESSION   XP_041320545
VERSION     XP_041320545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="thyrotropin releasing hormone"
                     /calculated_mol_wt=29347
     Region          14..223
                     /region_name="TRH"
                     /note="Thyrotropin-releasing hormone (TRH); pfam05438"
                     /db_xref="CDD:461653"
     CDS             1..255
                     /gene="TRH"
                     /coded_by="XM_041464611.1:218..985"
                     /db_xref="GeneID:121352043"
ORIGIN      
        1 mtsiqlplll lcltscgvcf ngghllpees enmgkspldy ilqrseslil qsalkkaeke
       61 einkesnapl lqrlskrqhp gkkylsnlek rqhpgkrdve eetsygdiqk rqhpgkreme
      121 ddldiylglk gqqppgrksl ldqfayspra qltymnelsk teqpgrrypm ykrqrpskrg
      181 wnygvdvyde krqhpgkrhw nsdssdntgp cnfqesltch kgsllldlvd vsrdrveekr
      241 qhpgkrsawe setee
//
LOCUS       XP_041320552             255 aa            linear   VRT 06-MAY-2021
DEFINITION  thyrotropin releasing hormone [Pyrgilauda ruficollis].
ACCESSION   XP_041320552
VERSION     XP_041320552.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464618.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="thyrotropin releasing hormone"
                     /calculated_mol_wt=29347
     Region          14..223
                     /region_name="TRH"
                     /note="Thyrotropin-releasing hormone (TRH); pfam05438"
                     /db_xref="CDD:461653"
     CDS             1..255
                     /gene="TRH"
                     /coded_by="XM_041464618.1:146..913"
                     /db_xref="GeneID:121352043"
ORIGIN      
        1 mtsiqlplll lcltscgvcf ngghllpees enmgkspldy ilqrseslil qsalkkaeke
       61 einkesnapl lqrlskrqhp gkkylsnlek rqhpgkrdve eetsygdiqk rqhpgkreme
      121 ddldiylglk gqqppgrksl ldqfayspra qltymnelsk teqpgrrypm ykrqrpskrg
      181 wnygvdvyde krqhpgkrhw nsdssdntgp cnfqesltch kgsllldlvd vsrdrveekr
      241 qhpgkrsawe setee
//
LOCUS       XP_041320558             255 aa            linear   VRT 06-MAY-2021
DEFINITION  thyrotropin releasing hormone [Pyrgilauda ruficollis].
ACCESSION   XP_041320558
VERSION     XP_041320558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="thyrotropin releasing hormone"
                     /calculated_mol_wt=29347
     Region          14..223
                     /region_name="TRH"
                     /note="Thyrotropin-releasing hormone (TRH); pfam05438"
                     /db_xref="CDD:461653"
     CDS             1..255
                     /gene="TRH"
                     /coded_by="XM_041464624.1:180..947"
                     /db_xref="GeneID:121352043"
ORIGIN      
        1 mtsiqlplll lcltscgvcf ngghllpees enmgkspldy ilqrseslil qsalkkaeke
       61 einkesnapl lqrlskrqhp gkkylsnlek rqhpgkrdve eetsygdiqk rqhpgkreme
      121 ddldiylglk gqqppgrksl ldqfayspra qltymnelsk teqpgrrypm ykrqrpskrg
      181 wnygvdvyde krqhpgkrhw nsdssdntgp cnfqesltch kgsllldlvd vsrdrveekr
      241 qhpgkrsawe setee
//
LOCUS       XP_041320567             255 aa            linear   VRT 06-MAY-2021
DEFINITION  thyrotropin releasing hormone [Pyrgilauda ruficollis].
ACCESSION   XP_041320567
VERSION     XP_041320567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="thyrotropin releasing hormone"
                     /calculated_mol_wt=29347
     Region          14..223
                     /region_name="TRH"
                     /note="Thyrotropin-releasing hormone (TRH); pfam05438"
                     /db_xref="CDD:461653"
     CDS             1..255
                     /gene="TRH"
                     /coded_by="XM_041464633.1:33..800"
                     /db_xref="GeneID:121352043"
ORIGIN      
        1 mtsiqlplll lcltscgvcf ngghllpees enmgkspldy ilqrseslil qsalkkaeke
       61 einkesnapl lqrlskrqhp gkkylsnlek rqhpgkrdve eetsygdiqk rqhpgkreme
      121 ddldiylglk gqqppgrksl ldqfayspra qltymnelsk teqpgrrypm ykrqrpskrg
      181 wnygvdvyde krqhpgkrhw nsdssdntgp cnfqesltch kgsllldlvd vsrdrveekr
      241 qhpgkrsawe setee
//
LOCUS       XP_041320583             186 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CFAP20DC [Pyrgilauda ruficollis].
ACCESSION   XP_041320583
VERSION     XP_041320583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..186
                     /product="protein CFAP20DC"
                     /calculated_mol_wt=21273
     Region          1..173
                     /region_name="CFA20_dom"
                     /note="CFA20 domain; pfam05018"
                     /db_xref="CDD:461521"
     CDS             1..186
                     /gene="CFAP20DC"
                     /coded_by="XM_041464649.1:1..561"
                     /db_xref="GeneID:121352067"
ORIGIN      
        1 mfrnhyqggr fveifsaqgk npgakwkifg npsaiskeyd kelkgfvfvl egnslinkmk
       61 lpretkqtlg lvqqfltlqi fvplgkdfst ellitdfdni krrlylstvh kelsvtplha
      121 kiplfmikrk iwcnmcidlv tftykifrga lfqsldgiti sancklrkvf tlkfkppvts
      181 eedgvf
//
LOCUS       XP_041320594            1452 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320594
VERSION     XP_041320594.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464660.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1452
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=160615
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1070
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1017,1020,1050,1054,1057..1058)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1129..1211
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1140..1146,1158,1161,1191,1195,1198..1199)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1452
                     /gene="MAGI1"
                     /coded_by="XM_041464660.1:118..4476"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii
     1021 egspadrcgk lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll
     1081 tnaekiatit tthtpqqipq etsrnntkpk qesqfdfkpp qaaqqdqdfy tvelergakg
     1141 fgfslrggre ynmdlyvlrl aedgpaercg kmrigdeile ingettknmk haraielikn
     1201 ggrkvrlflk rgdgsvpeyd pssdrnspat gsqnvsemkp apsdrrqhps sessyppdlh
     1261 kssqhgdkrt yvrdlkgsre fsrhpnehht wngtsktndh vpgrktersp errherqper
     1321 avvngqkrrs pekrregtrs adntlerrer lerrrdlspe rrrerspgrr rrslerltep
     1381 rrsperrren sldrrakssd rrrersperr lreervghre reepgwkhep srrhppeqrr
     1441 rpykecstdl si
//
LOCUS       XP_041320600            1451 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320600
VERSION     XP_041320600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1451
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=160486
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          355..386
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(370,381)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          449..533
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(449,470..474,476,497,499,505,507..508,530,532..533)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(460..466,478,481,511,515,518..519)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          618..701
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(631..637,648,651,678,682,685..686)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          707..784
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          816..900
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(827..833,845,848,878,882,885..886)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          973..1069
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(985..991,1016,1019,1049,1053,1056..1057)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1128..1210
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1139..1145,1157,1160,1190,1194,1197..1198)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1451
                     /gene="MAGI1"
                     /coded_by="XM_041464666.1:117..4472"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced degvhteeld selelpagwe
      361 kiedpvygvy yvdhinrktq yenpvleakr kkqleqqqqp peewteecps lpppaapnhv
      421 snnqeavrea pvqgkpfftr npselkgkfi htklrkssrg fgftvvggde pdeflqiksl
      481 vldgpaaldg kmetgdvivs vndtcvlght haqvvkifqs ipigasvdle lcrgyplpfd
      541 pddpntslvt svaildkepi ivngqenyds pashssktgk vngtkearps spaevssngp
      601 hgypndtvsl assiatqpel itvhivkgpm gfgftiadsp ggggqrvkqi vdsprcrglk
      661 egdlivevnk knvqslthnq vvdmliecpk gsevtllvqr gglpvpkksp ksqplerkds
      721 qnssqqsvss hrsghtaspa hstqvlpdya apeapaadqp dtsgqkkpdp fkiwaqsrsm
      781 yesrpmspsp atglskgere reinstsfge fpdyqeqdif lwrketgfgf rilggnepge
      841 piyighivpl gaadadgrlr sgdelicvdg tpvvgkshql vvqlmqqaak qghvnltvrr
      901 kvvytvpkae nevpspassh hssnqpaslt eekrtpqgsq nslntvssgs gstsgigsgg
      961 gggsgvvsav vqpydveirr genegfgfvi vssvsrpeag ttfagnacva mphkigriie
     1021 gspadrcgkl kvgdrilavn gcsitnkshs divnlikeag ntvtlriipg dessnatllt
     1081 naekiatitt thtpqqipqe tsrnntkpkq esqfdfkppq aaqqdqdfyt velergakgf
     1141 gfslrggrey nmdlyvlrla edgpaercgk mrigdeilei ngettknmkh araielikng
     1201 grkvrlflkr gdgsvpeydp ssdrnspatg sqnvsemkpa psdrrqhpss essyppdlhk
     1261 ssqhgdkrty vrdlkgsref srhpnehhtw ngtsktndhv pgrkterspe rrherqpera
     1321 vvngqkrrsp ekrregtrsa dntlerrerl errrdlsper rrerspgrrr rslerltepr
     1381 rsperrrens ldrrakssdr rrersperrl reervghrer eepgwkheps rrhppeqrrr
     1441 pykecstdls i
//
LOCUS       XP_041320612            1451 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041320612
VERSION     XP_041320612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1451
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=160487
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1070
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1017,1020,1050,1054,1057..1058)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1128..1210
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1139..1145,1157,1160,1190,1194,1197..1198)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1451
                     /gene="MAGI1"
                     /coded_by="XM_041464678.1:118..4473"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii
     1021 egspadrcgk lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll
     1081 tnaekiatit tthtpqqipq etsrnntkpk qesqfdfkpp qaaqdqdfyt velergakgf
     1141 gfslrggrey nmdlyvlrla edgpaercgk mrigdeilei ngettknmkh araielikng
     1201 grkvrlflkr gdgsvpeydp ssdrnspatg sqnvsemkpa psdrrqhpss essyppdlhk
     1261 ssqhgdkrty vrdlkgsref srhpnehhtw ngtsktndhv pgrkterspe rrherqpera
     1321 vvngqkrrsp ekrregtrsa dntlerrerl errrdlsper rrerspgrrr rslerltepr
     1381 rsperrrens ldrrakssdr rrersperrl reervghrer eepgwkheps rrhppeqrrr
     1441 pykecstdls i
//
LOCUS       XP_041320621            1451 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041320621
VERSION     XP_041320621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1451
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X4"
                     /calculated_mol_wt=160528
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1070
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1017,1020,1050,1054,1057..1058)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1128..1210
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1139..1145,1157,1160,1190,1194,1197..1198)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1451
                     /gene="MAGI1"
                     /coded_by="XM_041464687.1:118..4473"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii
     1021 egspadrcgk lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll
     1081 tnaekiatit tthtpqqipq etrnntkpkq esqfdfkppq aaqqdqdfyt velergakgf
     1141 gfslrggrey nmdlyvlrla edgpaercgk mrigdeilei ngettknmkh araielikng
     1201 grkvrlflkr gdgsvpeydp ssdrnspatg sqnvsemkpa psdrrqhpss essyppdlhk
     1261 ssqhgdkrty vrdlkgsref srhpnehhtw ngtsktndhv pgrkterspe rrherqpera
     1321 vvngqkrrsp ekrregtrsa dntlerrerl errrdlsper rrerspgrrr rslerltepr
     1381 rsperrrens ldrrakssdr rrersperrl reervghrer eepgwkheps rrhppeqrrr
     1441 pykecstdls i
//
LOCUS       XP_041320626            1450 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041320626
VERSION     XP_041320626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1450
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X5"
                     /calculated_mol_wt=160400
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1070
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1017,1020,1050,1054,1057..1058)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1127..1209
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1138..1144,1156,1159,1189,1193,1196..1197)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1450
                     /gene="MAGI1"
                     /coded_by="XM_041464692.1:119..4471"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii
     1021 egspadrcgk lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll
     1081 tnaekiatit tthtpqqipq etrnntkpkq esqfdfkppq aaqdqdfytv elergakgfg
     1141 fslrggreyn mdlyvlrlae dgpaercgkm rigdeilein gettknmkha raielikngg
     1201 rkvrlflkrg dgsvpeydps sdrnspatgs qnvsemkpap sdrrqhpsse ssyppdlhks
     1261 sqhgdkrtyv rdlkgsrefs rhpnehhtwn gtsktndhvp grktersper rherqperav
     1321 vngqkrrspe krregtrsad ntlerrerle rrrdlsperr rerspgrrrr slerlteprr
     1381 sperrrensl drrakssdrr rersperrlr eervghrere epgwkhepsr rhppeqrrrp
     1441 ykecstdlsi
//
LOCUS       XP_041320637            1440 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041320637
VERSION     XP_041320637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1440
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X6"
                     /calculated_mol_wt=159422
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1058
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1005,1008,1038,1042,1045..1046)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1117..1199
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1128..1134,1146,1149,1179,1183,1186..1187)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1440
                     /gene="MAGI1"
                     /coded_by="XM_041464703.1:117..4439"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfgriieg spadrcgklk
     1021 vgdrilavng csitnkshsd ivnlikeagn tvtlriipgd essnatlltn aekiatittt
     1081 htpqqipqet srnntkpkqe sqfdfkppqa aqqdqdfytv elergakgfg fslrggreyn
     1141 mdlyvlrlae dgpaercgkm rigdeilein gettknmkha raielikngg rkvrlflkrg
     1201 dgsvpeydps sdrnspatgs qnvsemkpap sdrrqhpsse ssyppdlhks sqhgdkrtyv
     1261 rdlkgsrefs rhpnehhtwn gtsktndhvp grktersper rherqperav vngqkrrspe
     1321 krregtrsad ntlerrerle rrrdlsperr rerspgrrrr slerlteprr sperrrensl
     1381 drrakssdrr rersperrlr eervghrere epgwkhepsr rhppeqrrrp ykecstdlsi
//
LOCUS       XP_041320648            1439 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041320648
VERSION     XP_041320648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1439
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X7"
                     /calculated_mol_wt=159147
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          437..521
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(437,458..462,464,485,487,493,495..496,518,520..521)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(448..454,466,469,499,503,506..507)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          606..689
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(619..625,636,639,666,670,673..674)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          695..772
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          804..888
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(815..821,833,836,866,870,873..874)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          961..1057
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(973..979,1004,1007,1037,1041,1044..1045)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1116..1198
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1127..1133,1145,1148,1178,1182,1185..1186)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1439
                     /gene="MAGI1"
                     /coded_by="XM_041464714.1:118..4437"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced delpagweki edpvygvyyv
      361 dhinrktqye npvleakrkk qleqqqqppe ewteecpslp ppaapnhvsn nqeavreapv
      421 qgkpfftrnp selkgkfiht klrkssrgfg ftvvggdepd eflqikslvl dgpaaldgkm
      481 etgdvivsvn dtcvlghtha qvvkifqsip igasvdlelc rgyplpfdpd dpntslvtsv
      541 aildkepiiv ngqenydspa shssktgkvn gtkearpssp aevssngphg ypndtvslas
      601 siatqpelit vhivkgpmgf gftiadspgg ggqrvkqivd sprcrglkeg dlivevnkkn
      661 vqslthnqvv dmliecpkgs evtllvqrgg lpvpkkspks qplerkdsqn ssqqsvsshr
      721 sghtaspahs tqvlpdyaap eapaadqpdt sgqkkpdpfk iwaqsrsmye srpmspspat
      781 glskgerere instsfgefp dyqeqdiflw rketgfgfri lggnepgepi yighivplga
      841 adadgrlrsg delicvdgtp vvgkshqlvv qlmqqaakqg hvnltvrrkv vytvpkaene
      901 vpspasshhs snqpasltee krtpqgsqns lntvssgsgs tsgigsgggg gsgvvsavvq
      961 pydveirrge negfgfvivs svsrpeagtt fagnacvamp hkigriiegs padrcgklkv
     1021 gdrilavngc sitnkshsdi vnlikeagnt vtlriipgde ssnatlltna ekiatittth
     1081 tpqqipqets rnntkpkqes qfdfkppqaa qqdqdfytve lergakgfgf slrggreynm
     1141 dlyvlrlaed gpaercgkmr igdeileing ettknmkhar aieliknggr kvrlflkrgd
     1201 gsvpeydpss drnspatgsq nvsemkpaps drrqhpsses syppdlhkss qhgdkrtyvr
     1261 dlkgsrefsr hpnehhtwng tsktndhvpg rktersperr herqperavv ngqkrrspek
     1321 rregtrsadn tlerrerler rrdlsperrr erspgrrrrs lerlteprrs perrrensld
     1381 rrakssdrrr ersperrlre ervghreree pgwkhepsrr hppeqrrrpy kecstdlsi
//
LOCUS       XP_041320659            1438 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041320659
VERSION     XP_041320659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1438
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X8"
                     /calculated_mol_wt=159206
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1058
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1005,1008,1038,1042,1045..1046)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1115..1197
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1126..1132,1144,1147,1177,1181,1184..1185)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1438
                     /gene="MAGI1"
                     /coded_by="XM_041464725.1:118..4434"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfgriieg spadrcgklk
     1021 vgdrilavng csitnkshsd ivnlikeagn tvtlriipgd essnatlltn aekiatittt
     1081 htpqqipqet rnntkpkqes qfdfkppqaa qdqdfytvel ergakgfgfs lrggreynmd
     1141 lyvlrlaedg paercgkmri gdeileinge ttknmkhara ieliknggrk vrlflkrgdg
     1201 svpeydpssd rnspatgsqn vsemkpapsd rrqhpssess yppdlhkssq hgdkrtyvrd
     1261 lkgsrefsrh pnehhtwngt sktndhvpgr ktersperrh erqperavvn gqkrrspekr
     1321 regtrsadnt lerrerlerr rdlsperrre rspgrrrrsl erlteprrsp errrensldr
     1381 rakssdrrre rsperrlree rvghrereep gwkhepsrrh ppeqrrrpyk ecstdlsi
//
LOCUS       XP_041320669            1426 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041320669
VERSION     XP_041320669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1426
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X9"
                     /calculated_mol_wt=157834
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..792
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          791..875
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(802..808,820,823,853,857,860..861)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          948..1044
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(960..966,991,994,1024,1028,1031..1032)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1103..1185
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1114..1120,1132,1135,1165,1169,1172..1173)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1426
                     /gene="MAGI1"
                     /coded_by="XM_041464735.1:117..4397"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrlpdyq eqdiflwrke tgfgfrilgg nepgepiyig hivplgaada dgrlrsgdel
      841 icvdgtpvvg kshqlvvqlm qqaakqghvn ltvrrkvvyt vpkaenevps passhhssnq
      901 paslteekrt pqgsqnslnt vssgsgstsg igsgggggsg vvsavvqpyd veirrgeneg
      961 fgfvivssvs rpeagttfag nacvamphki griiegspad rcgklkvgdr ilavngcsit
     1021 nkshsdivnl ikeagntvtl riipgdessn atlltnaeki atittthtpq qipqetsrnn
     1081 tkpkqesqfd fkppqaaqqd qdfytveler gakgfgfslr ggreynmdly vlrlaedgpa
     1141 ercgkmrigd eileingett knmkharaie liknggrkvr lflkrgdgsv peydpssdrn
     1201 spatgsqnvs emkpapsdrr qhpssessyp pdlhkssqhg dkrtyvrdlk gsrefsrhpn
     1261 ehhtwngtsk tndhvpgrkt ersperrher qperavvngq krrspekrre gtrsadntle
     1321 rrerlerrrd lsperrrers pgrrrrsler lteprrsper rrensldrra kssdrrrers
     1381 perrlreerv ghrereepgw khepsrrhpp eqrrrpykec stdlsi
//
LOCUS       XP_041320677            1424 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041320677
VERSION     XP_041320677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1424
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X10"
                     /calculated_mol_wt=157619
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..792
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          791..875
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(802..808,820,823,853,857,860..861)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          948..1044
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(960..966,991,994,1024,1028,1031..1032)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1101..1183
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1112..1118,1130,1133,1163,1167,1170..1171)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1424
                     /gene="MAGI1"
                     /coded_by="XM_041464743.1:118..4392"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrlpdyq eqdiflwrke tgfgfrilgg nepgepiyig hivplgaada dgrlrsgdel
      841 icvdgtpvvg kshqlvvqlm qqaakqghvn ltvrrkvvyt vpkaenevps passhhssnq
      901 paslteekrt pqgsqnslnt vssgsgstsg igsgggggsg vvsavvqpyd veirrgeneg
      961 fgfvivssvs rpeagttfag nacvamphki griiegspad rcgklkvgdr ilavngcsit
     1021 nkshsdivnl ikeagntvtl riipgdessn atlltnaeki atittthtpq qipqetrnnt
     1081 kpkqesqfdf kppqaaqdqd fytvelerga kgfgfslrgg reynmdlyvl rlaedgpaer
     1141 cgkmrigdei leingettkn mkharaieli knggrkvrlf lkrgdgsvpe ydpssdrnsp
     1201 atgsqnvsem kpapsdrrqh pssessyppd lhkssqhgdk rtyvrdlkgs refsrhpneh
     1261 htwngtsktn dhvpgrkter sperrherqp eravvngqkr rspekrregt rsadntlerr
     1321 erlerrrdls perrrerspg rrrrslerlt eprrsperrr ensldrraks sdrrrerspe
     1381 rrlreervgh rereepgwkh epsrrhppeq rrrpykecst dlsi
//
LOCUS       XP_041320686            1421 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041320686
VERSION     XP_041320686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1421
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X11"
                     /calculated_mol_wt=157235
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          419..503
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(419,440..444,446,467,469,475,477..478,500,502..503)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(430..436,448,451,481,485,488..489)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          588..671
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(601..607,618,621,648,652,655..656)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          677..754
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          786..870
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(797..803,815,818,848,852,855..856)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          943..1039
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(955..961,986,989,1019,1023,1026..1027)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1098..1180
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1109..1115,1127,1130,1160,1164,1167..1168)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1421
                     /gene="MAGI1"
                     /coded_by="XM_041464752.1:117..4382"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppegkpfftr npselkgkfi
      421 htklrkssrg fgftvvggde pdeflqiksl vldgpaaldg kmetgdvivs vndtcvlght
      481 haqvvkifqs ipigasvdle lcrgyplpfd pddpntslvt svaildkepi ivngqenyds
      541 pashssktgk vngtkearps spaevssngp hgypndtvsl assiatqpel itvhivkgpm
      601 gfgftiadsp ggggqrvkqi vdsprcrglk egdlivevnk knvqslthnq vvdmliecpk
      661 gsevtllvqr gglpvpkksp ksqplerkds qnssqqsvss hrsghtaspa hstqvlpdya
      721 apeapaadqp dtsgqkkpdp fkiwaqsrsm yesrpmspsp atglskgere reinstsfge
      781 fpdyqeqdif lwrketgfgf rilggnepge piyighivpl gaadadgrlr sgdelicvdg
      841 tpvvgkshql vvqlmqqaak qghvnltvrr kvvytvpkae nevpspassh hssnqpaslt
      901 eekrtpqgsq nslntvssgs gstsgigsgg gggsgvvsav vqpydveirr genegfgfvi
      961 vssvsrpeag ttfagnacva mphkigriie gspadrcgkl kvgdrilavn gcsitnkshs
     1021 divnlikeag ntvtlriipg dessnatllt naekiatitt thtpqqipqe tsrnntkpkq
     1081 esqfdfkppq aaqqdqdfyt velergakgf gfslrggrey nmdlyvlrla edgpaercgk
     1141 mrigdeilei ngettknmkh araielikng grkvrlflkr gdgsvpeydp ssdrnspatg
     1201 sqnvsemkpa psdrrqhpss essyppdlhk ssqhgdkrty vrdlkgsref srhpnehhtw
     1261 ngtsktndhv pgrkterspe rrherqpera vvngqkrrsp ekrregtrsa dntlerrerl
     1321 errrdlsper rrerspgrrr rslerltepr rsperrrens ldrrakssdr rrersperrl
     1381 reervghrer eepgwkheps rrhppeqrrr pykecstdls i
//
LOCUS       XP_041320695            1396 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X12 [Pyrgilauda ruficollis].
ACCESSION   XP_041320695
VERSION     XP_041320695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1396
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X12"
                     /calculated_mol_wt=154838
     Region          57..204
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          240..269
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          300..331
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(315,326)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          394..478
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(394,415..419,421,442,444,450,452..453,475,477..478)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(405..411,423,426,456,460,463..464)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          563..646
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(576..582,593,596,623,627,630..631)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          652..729
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          761..845
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(772..778,790,793,823,827,830..831)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          918..1014
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(930..936,961,964,994,998,1001..1002)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1073..1155
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1084..1090,1102,1105,1135,1139,1142..1143)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1396
                     /gene="MAGI1"
                     /coded_by="XM_041464761.1:88..4278"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 megsvglrvd trtrvgyral arrlgsvgcr dhrdhgslqg srlnkdlrhy lnqrfqkgsp
       61 dhdlqqtird nlyrhavpct trppregevp gvdynfltve eflelersgt llevgtyegn
      121 yygtpkppsq plsgkvtstn alqnlqsgsk qstpkrtksy ndmqnagivh teneeeddvp
      181 emsssftaes gdqdehsahi greaappsti erhthvptte psqnlpqylp psaednlgpl
      241 penwemayte ngevyfidhn tkttswldpr clnkqqkple eceddeegvh teeldselel
      301 pagwekiedp vygvyyvdhi nrktqyenpv leakrkkqle qqqqppeewt eecpslpppa
      361 apnhvsnnqe avreapvqgk pfftrnpsel kgkfihtklr kssrgfgftv vggdepdefl
      421 qikslvldgp aaldgkmetg dvivsvndtc vlghthaqvv kifqsipiga svdlelcrgy
      481 plpfdpddpn tslvtsvail dkepiivngq enydspashs sktgkvngtk earpsspaev
      541 ssngphgypn dtvslassia tqpelitvhi vkgpmgfgft iadspggggq rvkqivdspr
      601 crglkegdli vevnkknvqs lthnqvvdml iecpkgsevt llvqrgglpv pkkspksqpl
      661 erkdsqnssq qsvsshrsgh taspahstqv lpdyaapeap aadqpdtsgq kkpdpfkiwa
      721 qsrsmyesrp mspspatgls kgerereins tsfgefpdyq eqdiflwrke tgfgfrilgg
      781 nepgepiyig hivplgaada dgrlrsgdel icvdgtpvvg kshqlvvqlm qqaakqghvn
      841 ltvrrkvvyt vpkaenevps passhhssnq paslteekrt pqgsqnslnt vssgsgstsg
      901 igsgggggsg vvsavvqpyd veirrgeneg fgfvivssvs rpeagttfag nacvamphki
      961 griiegspad rcgklkvgdr ilavngcsit nkshsdivnl ikeagntvtl riipgdessn
     1021 atlltnaeki atittthtpq qipqetsrnn tkpkqesqfd fkppqaaqqd qdfytveler
     1081 gakgfgfslr ggreynmdly vlrlaedgpa ercgkmrigd eileingett knmkharaie
     1141 liknggrkvr lflkrgdgsv peydpssdrn spatgsqnvs emkpapsdrr qhpssessyp
     1201 pdlhkssqhg dkrtyvrdlk gsrefsrhpn ehhtwngtsk tndhvpgrkt ersperrher
     1261 qperavvngq krrspekrre gtrsadntle rrerlerrrd lsperrrers pgrrrrsler
     1321 lteprrsper rrensldrra kssdrrrers perrlreerv ghrereepgw khepsrrhpp
     1381 eqrrrpykec stdlsi
//
LOCUS       XP_041320706            1384 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X13 [Pyrgilauda ruficollis].
ACCESSION   XP_041320706
VERSION     XP_041320706.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464772.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1384
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X13"
                     /calculated_mol_wt=153553
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          1061..1143
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1072..1078,1090,1093,1123,1127,1130..1131)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1384
                     /gene="MAGI1"
                     /coded_by="XM_041464772.1:117..4271"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfessnat lltnaekiat
     1021 ittthtpqqi pqetsrnntk pkqesqfdfk ppqaaqqdqd fytvelerga kgfgfslrgg
     1081 reynmdlyvl rlaedgpaer cgkmrigdei leingettkn mkharaieli knggrkvrlf
     1141 lkrgdgsvpe ydpssdrnsp atgsqnvsem kpapsdrrqh pssessyppd lhkssqhgdk
     1201 rtyvrdlkgs refsrhpneh htwngtsktn dhvpgrkter sperrherqp eravvngqkr
     1261 rspekrregt rsadntlerr erlerrrdls perrrerspg rrrrslerlt eprrsperrr
     1321 ensldrraks sdrrrerspe rrlreervgh rereepgwkh epsrrhppeq rrrpykecst
     1381 dlsi
//
LOCUS       XP_041320716            1383 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X14 [Pyrgilauda ruficollis].
ACCESSION   XP_041320716
VERSION     XP_041320716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1383
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X14"
                     /calculated_mol_wt=153466
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          1060..1142
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1071..1077,1089,1092,1122,1126,1129..1130)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1383
                     /gene="MAGI1"
                     /coded_by="XM_041464782.1:118..4269"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfessnat lltnaekiat
     1021 ittthtpqqi pqetrnntkp kqesqfdfkp pqaaqqdqdf ytvelergak gfgfslrggr
     1081 eynmdlyvlr laedgpaerc gkmrigdeil eingettknm kharaielik nggrkvrlfl
     1141 krgdgsvpey dpssdrnspa tgsqnvsemk papsdrrqhp ssessyppdl hkssqhgdkr
     1201 tyvrdlkgsr efsrhpnehh twngtsktnd hvpgrkters perrherqpe ravvngqkrr
     1261 spekrregtr sadntlerre rlerrrdlsp errrerspgr rrrslerlte prrsperrre
     1321 nsldrrakss drrrersper rlreervghr ereepgwkhe psrrhppeqr rrpykecstd
     1381 lsi
//
LOCUS       XP_041320723            1382 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X15 [Pyrgilauda ruficollis].
ACCESSION   XP_041320723
VERSION     XP_041320723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1382
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X15"
                     /calculated_mol_wt=152986
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          406..490
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(406,427..431,433,454,456,462,464..465,487,489..490)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(417..423,435,438,468,472,475..476)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          575..658
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(588..594,605,608,635,639,642..643)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          664..748
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          747..831
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(758..764,776,779,809,813,816..817)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          904..1000
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(916..922,947,950,980,984,987..988)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1059..1141
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1070..1076,1088,1091,1121,1125,1128..1129)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1382
                     /gene="MAGI1"
                     /coded_by="XM_041464789.1:116..4264"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced delpagweki edpvygvyyv
      361 dhinrktqye npvleakrkk qleqqqqppe gkpfftrnps elkgkfihtk lrkssrgfgf
      421 tvvggdepde flqikslvld gpaaldgkme tgdvivsvnd tcvlghthaq vvkifqsipi
      481 gasvdlelcr gyplpfdpdd pntslvtsva ildkepiivn gqenydspas hssktgkvng
      541 tkearpsspa evssngphgy pndtvslass iatqpelitv hivkgpmgfg ftiadspggg
      601 gqrvkqivds prcrglkegd livevnkknv qslthnqvvd mliecpkgse vtllvqrggl
      661 pvpkkspksq plerkdsqns sqqsvsshrs ghtaspahst qvlpdyaape apaadqpdts
      721 gqkkpdpfki waqsrsmyes rlpdyqeqdi flwrketgfg frilggnepg epiyighivp
      781 lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr rkvvytvpka
      841 enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg ggggsgvvsa
      901 vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii egspadrcgk
      961 lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll tnaekiatit
     1021 tthtpqqipq etsrnntkpk qesqfdfkpp qaaqqdqdfy tvelergakg fgfslrggre
     1081 ynmdlyvlrl aedgpaercg kmrigdeile ingettknmk haraielikn ggrkvrlflk
     1141 rgdgsvpeyd pssdrnspat gsqnvsemkp apsdrrqhps sessyppdlh kssqhgdkrt
     1201 yvrdlkgsre fsrhpnehht wngtsktndh vpgrktersp errherqper avvngqkrrs
     1261 pekrregtrs adntlerrer lerrrdlspe rrrerspgrr rrslerltep rrsperrren
     1321 sldrrakssd rrrersperr lreervghre reepgwkhep srrhppeqrr rpykecstdl
     1381 si
//
LOCUS       XP_041320727            1377 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X16 [Pyrgilauda ruficollis].
ACCESSION   XP_041320727
VERSION     XP_041320727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1377
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X16"
                     /calculated_mol_wt=152717
     Region          38..185
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          221..250
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          281..312
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(296,307)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          375..459
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(375,396..400,402,423,425,431,433..434,456,458..459)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(386..392,404,407,437,441,444..445)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          544..627
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(557..563,574,577,604,608,611..612)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          633..710
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          742..826
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(753..759,771,774,804,808,811..812)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          899..995
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(911..917,942,945,975,979,982..983)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1054..1136
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1065..1071,1083,1086,1116,1120,1123..1124)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1377
                     /gene="MAGI1"
                     /coded_by="XM_041464793.1:43..4176"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 mtcsvflpca ctswtsprvq gsrlnkdlrh ylnqrfqkgs pdhdlqqtir dnlyrhavpc
       61 ttrppregev pgvdynfltv eeflelersg tllevgtyeg nyygtpkpps qplsgkvtst
      121 nalqnlqsgs kqstpkrtks yndmqnagiv hteneeeddv pemsssftae sgdqdehsah
      181 igreaappst ierhthvptt epsqnlpqyl ppsaednlgp lpenwemayt engevyfidh
      241 ntkttswldp rclnkqqkpl eeceddeegv hteeldsele lpagwekied pvygvyyvdh
      301 inrktqyenp vleakrkkql eqqqqppeew teecpslppp aapnhvsnnq eavreapvqg
      361 kpfftrnpse lkgkfihtkl rkssrgfgft vvggdepdef lqikslvldg paaldgkmet
      421 gdvivsvndt cvlghthaqv vkifqsipig asvdlelcrg yplpfdpddp ntslvtsvai
      481 ldkepiivng qenydspash ssktgkvngt kearpsspae vssngphgyp ndtvslassi
      541 atqpelitvh ivkgpmgfgf tiadspgggg qrvkqivdsp rcrglkegdl ivevnkknvq
      601 slthnqvvdm liecpkgsev tllvqrgglp vpkkspksqp lerkdsqnss qqsvsshrsg
      661 htaspahstq vlpdyaapea paadqpdtsg qkkpdpfkiw aqsrsmyesr pmspspatgl
      721 skgererein stsfgefpdy qeqdiflwrk etgfgfrilg gnepgepiyi ghivplgaad
      781 adgrlrsgde licvdgtpvv gkshqlvvql mqqaakqghv nltvrrkvvy tvpkaenevp
      841 spasshhssn qpaslteekr tpqgsqnsln tvssgsgsts gigsgggggs gvvsavvqpy
      901 dveirrgene gfgfvivssv srpeagttfa gnacvamphk igriiegspa drcgklkvgd
      961 rilavngcsi tnkshsdivn likeagntvt lriipgdess natlltnaek iatittthtp
     1021 qqipqetsrn ntkpkqesqf dfkppqaaqq dqdfytvele rgakgfgfsl rggreynmdl
     1081 yvlrlaedgp aercgkmrig deileinget tknmkharai eliknggrkv rlflkrgdgs
     1141 vpeydpssdr nspatgsqnv semkpapsdr rqhpssessy ppdlhkssqh gdkrtyvrdl
     1201 kgsrefsrhp nehhtwngts ktndhvpgrk tersperrhe rqperavvng qkrrspekrr
     1261 egtrsadntl errerlerrr dlsperrrer spgrrrrsle rlteprrspe rrrensldrr
     1321 akssdrrrer sperrlreer vghrereepg wkhepsrrhp peqrrrpyke cstdlsi
//
LOCUS       XP_041320735            1370 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X17 [Pyrgilauda ruficollis].
ACCESSION   XP_041320735
VERSION     XP_041320735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1370
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X17"
                     /calculated_mol_wt=151792
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          406..490
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(406,427..431,433,454,456,462,464..465,487,489..490)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(417..423,435,438,468,472,475..476)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          575..658
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(588..594,605,608,635,639,642..643)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          664..748
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          747..831
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(758..764,776,779,809,813,816..817)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          904..988
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(916..922,935,938,968,972,975..976)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1047..1129
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1058..1064,1076,1079,1109,1113,1116..1117)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1370
                     /gene="MAGI1"
                     /coded_by="XM_041464801.1:115..4227"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced delpagweki edpvygvyyv
      361 dhinrktqye npvleakrkk qleqqqqppe gkpfftrnps elkgkfihtk lrkssrgfgf
      421 tvvggdepde flqikslvld gpaaldgkme tgdvivsvnd tcvlghthaq vvkifqsipi
      481 gasvdlelcr gyplpfdpdd pntslvtsva ildkepiivn gqenydspas hssktgkvng
      541 tkearpsspa evssngphgy pndtvslass iatqpelitv hivkgpmgfg ftiadspggg
      601 gqrvkqivds prcrglkegd livevnkknv qslthnqvvd mliecpkgse vtllvqrggl
      661 pvpkkspksq plerkdsqns sqqsvsshrs ghtaspahst qvlpdyaape apaadqpdts
      721 gqkkpdpfki waqsrsmyes rlpdyqeqdi flwrketgfg frilggnepg epiyighivp
      781 lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr rkvvytvpka
      841 enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg ggggsgvvsa
      901 vvqpydveir rgenegfgfv ivssvsrpea gttfgriieg spadrcgklk vgdrilavng
      961 csitnkshsd ivnlikeagn tvtlriipgd essnatlltn aekiatittt htpqqipqet
     1021 srnntkpkqe sqfdfkppqa aqqdqdfytv elergakgfg fslrggreyn mdlyvlrlae
     1081 dgpaercgkm rigdeilein gettknmkha raielikngg rkvrlflkrg dgsvpeydps
     1141 sdrnspatgs qnvsemkpap sdrrqhpsse ssyppdlhks sqhgdkrtyv rdlkgsrefs
     1201 rhpnehhtwn gtsktndhvp grktersper rherqperav vngqkrrspe krregtrsad
     1261 ntlerrerle rrrdlsperr rerspgrrrr slerlteprr sperrrensl drrakssdrr
     1321 rersperrlr eervghrere epgwkhepsr rhppeqrrrp ykecstdlsi
//
LOCUS       XP_041320743            1313 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X18 [Pyrgilauda ruficollis].
ACCESSION   XP_041320743
VERSION     XP_041320743.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464809.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1313
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X18"
                     /calculated_mol_wt=145796
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          406..490
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(406,427..431,433,454,456,462,464..465,487,489..490)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(417..423,435,438,468,472,475..476)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          575..658
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(588..594,605,608,635,639,642..643)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          664..748
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          747..831
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(758..764,776,779,809,813,816..817)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          990..1072
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1001..1007,1019,1022,1052,1056,1059..1060)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1313
                     /gene="MAGI1"
                     /coded_by="XM_041464809.1:115..4056"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced delpagweki edpvygvyyv
      361 dhinrktqye npvleakrkk qleqqqqppe gkpfftrnps elkgkfihtk lrkssrgfgf
      421 tvvggdepde flqikslvld gpaaldgkme tgdvivsvnd tcvlghthaq vvkifqsipi
      481 gasvdlelcr gyplpfdpdd pntslvtsva ildkepiivn gqenydspas hssktgkvng
      541 tkearpsspa evssngphgy pndtvslass iatqpelitv hivkgpmgfg ftiadspggg
      601 gqrvkqivds prcrglkegd livevnkknv qslthnqvvd mliecpkgse vtllvqrggl
      661 pvpkkspksq plerkdsqns sqqsvsshrs ghtaspahst qvlpdyaape apaadqpdts
      721 gqkkpdpfki waqsrsmyes rlpdyqeqdi flwrketgfg frilggnepg epiyighivp
      781 lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr rkvvytvpka
      841 enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg ggggsgvvsa
      901 vvqpydveir rgenegfgfv ivssvsrpea gttfessnat lltnaekiat ittthtpqqi
      961 pqetsrnntk pkqesqfdfk ppqaaqdqdf ytvelergak gfgfslrggr eynmdlyvlr
     1021 laedgpaerc gkmrigdeil eingettknm kharaielik nggrkvrlfl krgdgsvpey
     1081 dpssdrnspa tgsqnvsemk papsdrrqhp ssessyppdl hkssqhgdkr tyvrdlkgsr
     1141 efsrhpnehh twngtsktnd hvpgrkters perrherqpe ravvngqkrr spekrregtr
     1201 sadntlerre rlerrrdlsp errrerspgr rrrslerlte prrsperrre nsldrrakss
     1261 drrrersper rlreervghr ereepgwkhe psrrhppeqr rrpykecstd lsi
//
LOCUS       XP_041320752            1267 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X19 [Pyrgilauda ruficollis].
ACCESSION   XP_041320752
VERSION     XP_041320752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464818.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1267
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X19"
                     /calculated_mol_wt=137920
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          297..326
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1070
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1017,1020,1050,1054,1057..1058)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1129..1211
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1140..1146,1158,1161,1191,1195,1198..1199)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1267
                     /gene="MAGI1"
                     /coded_by="XM_041464818.1:125..3928"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii
     1021 egspadrcgk lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll
     1081 tnaekiatit tthtpqqipq etsrnntkpk qesqfdfkpp qaaqqdqdfy tvelergakg
     1141 fgfslrggre ynmdlyvlrl aedgpaercg kmrigdeile ingettknmk haraielikn
     1201 ggrkvrlflk rgdgsvpeya mippniaacm rndklgescf ylmghnqttt pavtgtvppq
     1261 vhkmyrk
//
LOCUS       XP_041320761            1265 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X20 [Pyrgilauda ruficollis].
ACCESSION   XP_041320761
VERSION     XP_041320761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1265
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X20"
                     /calculated_mol_wt=137704
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          297..326
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1070
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1017,1020,1050,1054,1057..1058)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1127..1209
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1138..1144,1156,1159,1189,1193,1196..1197)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1265
                     /gene="MAGI1"
                     /coded_by="XM_041464827.1:127..3924"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii
     1021 egspadrcgk lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll
     1081 tnaekiatit tthtpqqipq etrnntkpkq esqfdfkppq aaqdqdfytv elergakgfg
     1141 fslrggreyn mdlyvlrlae dgpaercgkm rigdeilein gettknmkha raielikngg
     1201 rkvrlflkrg dgsvpeyami ppniaacmrn dklgescfyl mghnqtttpa vtgtvppqvh
     1261 kmyrk
//
LOCUS       XP_041320770            1233 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X21 [Pyrgilauda ruficollis].
ACCESSION   XP_041320770
VERSION     XP_041320770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1233
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X21"
                     /calculated_mol_wt=134094
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          297..326
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          356..387
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(371,382)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          450..534
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(450,471..475,477,498,500,506,508..509,531,533..534)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(461..467,479,482,512,516,519..520)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          619..702
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(632..638,649,652,679,683,686..687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          708..785
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          817..901
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(828..834,846,849,879,883,886..887)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          974..1070
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(986..992,1017,1020,1050,1054,1057..1058)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1127..1209
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1138..1144,1156,1159,1189,1193,1196..1197)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1233
                     /gene="MAGI1"
                     /coded_by="XM_041464836.1:127..3828"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced deegvhteel dselelpagw
      361 ekiedpvygv yyvdhinrkt qyenpvleak rkkqleqqqq ppeewteecp slpppaapnh
      421 vsnnqeavre apvqgkpfft rnpselkgkf ihtklrkssr gfgftvvggd epdeflqiks
      481 lvldgpaald gkmetgdviv svndtcvlgh thaqvvkifq sipigasvdl elcrgyplpf
      541 dpddpntslv tsvaildkep iivngqenyd spashssktg kvngtkearp sspaevssng
      601 phgypndtvs lassiatqpe litvhivkgp mgfgftiads pggggqrvkq ivdsprcrgl
      661 kegdlivevn kknvqslthn qvvdmliecp kgsevtllvq rgglpvpkks pksqplerkd
      721 sqnssqqsvs shrsghtasp ahstqvlpdy aapeapaadq pdtsgqkkpd pfkiwaqsrs
      781 myesrpmsps patglskger ereinstsfg efpdyqeqdi flwrketgfg frilggnepg
      841 epiyighivp lgaadadgrl rsgdelicvd gtpvvgkshq lvvqlmqqaa kqghvnltvr
      901 rkvvytvpka enevpspass hhssnqpasl teekrtpqgs qnslntvssg sgstsgigsg
      961 ggggsgvvsa vvqpydveir rgenegfgfv ivssvsrpea gttfagnacv amphkigrii
     1021 egspadrcgk lkvgdrilav ngcsitnksh sdivnlikea gntvtlriip gdessnatll
     1081 tnaekiatit tthtpqqipq etrnntkpkq esqfdfkppq aaqdqdfytv elergakgfg
     1141 fslrggreyn mdlyvlrlae dgpaercgkm rigdeilein gettknmkha raielikngg
     1201 rkvrlflkrg dgsvpeyggs nyenipffpg itp
//
LOCUS       XP_041320779            1449 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X22 [Pyrgilauda ruficollis].
ACCESSION   XP_041320779
VERSION     XP_041320779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1449
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X22"
                     /calculated_mol_wt=160271
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          355..386
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(370,381)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          449..533
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(449,470..474,476,497,499,505,507..508,530,532..533)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(460..466,478,481,511,515,518..519)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          618..701
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(631..637,648,651,678,682,685..686)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          707..784
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          816..900
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(827..833,845,848,878,882,885..886)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          973..1069
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(985..991,1016,1019,1049,1053,1056..1057)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1126..1208
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1137..1143,1155,1158,1188,1192,1195..1196)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1449
                     /gene="MAGI1"
                     /coded_by="XM_041464845.1:118..4467"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced degvhteeld selelpagwe
      361 kiedpvygvy yvdhinrktq yenpvleakr kkqleqqqqp peewteecps lpppaapnhv
      421 snnqeavrea pvqgkpfftr npselkgkfi htklrkssrg fgftvvggde pdeflqiksl
      481 vldgpaaldg kmetgdvivs vndtcvlght haqvvkifqs ipigasvdle lcrgyplpfd
      541 pddpntslvt svaildkepi ivngqenyds pashssktgk vngtkearps spaevssngp
      601 hgypndtvsl assiatqpel itvhivkgpm gfgftiadsp ggggqrvkqi vdsprcrglk
      661 egdlivevnk knvqslthnq vvdmliecpk gsevtllvqr gglpvpkksp ksqplerkds
      721 qnssqqsvss hrsghtaspa hstqvlpdya apeapaadqp dtsgqkkpdp fkiwaqsrsm
      781 yesrpmspsp atglskgere reinstsfge fpdyqeqdif lwrketgfgf rilggnepge
      841 piyighivpl gaadadgrlr sgdelicvdg tpvvgkshql vvqlmqqaak qghvnltvrr
      901 kvvytvpkae nevpspassh hssnqpaslt eekrtpqgsq nslntvssgs gstsgigsgg
      961 gggsgvvsav vqpydveirr genegfgfvi vssvsrpeag ttfagnacva mphkigriie
     1021 gspadrcgkl kvgdrilavn gcsitnkshs divnlikeag ntvtlriipg dessnatllt
     1081 naekiatitt thtpqqipqe trnntkpkqe sqfdfkppqa aqdqdfytve lergakgfgf
     1141 slrggreynm dlyvlrlaed gpaercgkmr igdeileing ettknmkhar aieliknggr
     1201 kvrlflkrgd gsvpeydpss drnspatgsq nvsemkpaps drrqhpsses syppdlhkss
     1261 qhgdkrtyvr dlkgsrefsr hpnehhtwng tsktndhvpg rktersperr herqperavv
     1321 ngqkrrspek rregtrsadn tlerrerler rrdlsperrr erspgrrrrs lerlteprrs
     1381 perrrensld rrakssdrrr ersperrlre ervghreree pgwkhepsrr hppeqrrrpy
     1441 kecstdlsi
//
LOCUS       XP_041320787            1437 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X23 [Pyrgilauda ruficollis].
ACCESSION   XP_041320787
VERSION     XP_041320787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1437
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X23"
                     /calculated_mol_wt=159077
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          355..386
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(370,381)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          449..533
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(449,470..474,476,497,499,505,507..508,530,532..533)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(460..466,478,481,511,515,518..519)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          618..701
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(631..637,648,651,678,682,685..686)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          707..784
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          816..900
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(827..833,845,848,878,882,885..886)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          973..1057
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(985..991,1004,1007,1037,1041,1044..1045)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1114..1196
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1125..1131,1143,1146,1176,1180,1183..1184)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1437
                     /gene="MAGI1"
                     /coded_by="XM_041464853.1:118..4431"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced degvhteeld selelpagwe
      361 kiedpvygvy yvdhinrktq yenpvleakr kkqleqqqqp peewteecps lpppaapnhv
      421 snnqeavrea pvqgkpfftr npselkgkfi htklrkssrg fgftvvggde pdeflqiksl
      481 vldgpaaldg kmetgdvivs vndtcvlght haqvvkifqs ipigasvdle lcrgyplpfd
      541 pddpntslvt svaildkepi ivngqenyds pashssktgk vngtkearps spaevssngp
      601 hgypndtvsl assiatqpel itvhivkgpm gfgftiadsp ggggqrvkqi vdsprcrglk
      661 egdlivevnk knvqslthnq vvdmliecpk gsevtllvqr gglpvpkksp ksqplerkds
      721 qnssqqsvss hrsghtaspa hstqvlpdya apeapaadqp dtsgqkkpdp fkiwaqsrsm
      781 yesrpmspsp atglskgere reinstsfge fpdyqeqdif lwrketgfgf rilggnepge
      841 piyighivpl gaadadgrlr sgdelicvdg tpvvgkshql vvqlmqqaak qghvnltvrr
      901 kvvytvpkae nevpspassh hssnqpaslt eekrtpqgsq nslntvssgs gstsgigsgg
      961 gggsgvvsav vqpydveirr genegfgfvi vssvsrpeag ttfgriiegs padrcgklkv
     1021 gdrilavngc sitnkshsdi vnlikeagnt vtlriipgde ssnatlltna ekiatittth
     1081 tpqqipqetr nntkpkqesq fdfkppqaaq dqdfytvele rgakgfgfsl rggreynmdl
     1141 yvlrlaedgp aercgkmrig deileinget tknmkharai eliknggrkv rlflkrgdgs
     1201 vpeydpssdr nspatgsqnv semkpapsdr rqhpssessy ppdlhkssqh gdkrtyvrdl
     1261 kgsrefsrhp nehhtwngts ktndhvpgrk tersperrhe rqperavvng qkrrspekrr
     1321 egtrsadntl errerlerrr dlsperrrer spgrrrrsle rlteprrspe rrrensldrr
     1381 akssdrrrer sperrlreer vghrereepg wkhepsrrhp peqrrrpyke cstdlsi
//
LOCUS       XP_041320795            1437 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X24 [Pyrgilauda ruficollis].
ACCESSION   XP_041320795
VERSION     XP_041320795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1437
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X24"
                     /calculated_mol_wt=158931
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          437..521
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(437,458..462,464,485,487,493,495..496,518,520..521)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(448..454,466,469,499,503,506..507)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          606..689
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(619..625,636,639,666,670,673..674)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          695..772
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          804..888
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(815..821,833,836,866,870,873..874)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          961..1057
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(973..979,1004,1007,1037,1041,1044..1045)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1114..1196
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1125..1131,1143,1146,1176,1180,1183..1184)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1437
                     /gene="MAGI1"
                     /coded_by="XM_041464861.1:118..4431"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced delpagweki edpvygvyyv
      361 dhinrktqye npvleakrkk qleqqqqppe ewteecpslp ppaapnhvsn nqeavreapv
      421 qgkpfftrnp selkgkfiht klrkssrgfg ftvvggdepd eflqikslvl dgpaaldgkm
      481 etgdvivsvn dtcvlghtha qvvkifqsip igasvdlelc rgyplpfdpd dpntslvtsv
      541 aildkepiiv ngqenydspa shssktgkvn gtkearpssp aevssngphg ypndtvslas
      601 siatqpelit vhivkgpmgf gftiadspgg ggqrvkqivd sprcrglkeg dlivevnkkn
      661 vqslthnqvv dmliecpkgs evtllvqrgg lpvpkkspks qplerkdsqn ssqqsvsshr
      721 sghtaspahs tqvlpdyaap eapaadqpdt sgqkkpdpfk iwaqsrsmye srpmspspat
      781 glskgerere instsfgefp dyqeqdiflw rketgfgfri lggnepgepi yighivplga
      841 adadgrlrsg delicvdgtp vvgkshqlvv qlmqqaakqg hvnltvrrkv vytvpkaene
      901 vpspasshhs snqpasltee krtpqgsqns lntvssgsgs tsgigsgggg gsgvvsavvq
      961 pydveirrge negfgfvivs svsrpeagtt fagnacvamp hkigriiegs padrcgklkv
     1021 gdrilavngc sitnkshsdi vnlikeagnt vtlriipgde ssnatlltna ekiatittth
     1081 tpqqipqetr nntkpkqesq fdfkppqaaq dqdfytvele rgakgfgfsl rggreynmdl
     1141 yvlrlaedgp aercgkmrig deileinget tknmkharai eliknggrkv rlflkrgdgs
     1201 vpeydpssdr nspatgsqnv semkpapsdr rqhpssessy ppdlhkssqh gdkrtyvrdl
     1261 kgsrefsrhp nehhtwngts ktndhvpgrk tersperrhe rqperavvng qkrrspekrr
     1321 egtrsadntl errerlerrr dlsperrrer spgrrrrsle rlteprrspe rrrensldrr
     1381 akssdrrrer sperrlreer vghrereepg wkhepsrrhp peqrrrpyke cstdlsi
//
LOCUS       XP_041320804            1423 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X25 [Pyrgilauda ruficollis].
ACCESSION   XP_041320804
VERSION     XP_041320804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1423
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1423
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X25"
                     /calculated_mol_wt=157490
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..325
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          355..386
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(370,381)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          449..533
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(449,470..474,476,497,499,505,507..508,530,532..533)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(460..466,478,481,511,515,518..519)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          618..701
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(631..637,648,651,678,682,685..686)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          707..791
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          790..874
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(801..807,819,822,852,856,859..860)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          947..1043
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(959..965,990,993,1023,1027,1030..1031)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1100..1182
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1111..1117,1129,1132,1162,1166,1169..1170)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1423
                     /gene="MAGI1"
                     /coded_by="XM_041464870.1:117..4388"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced degvhteeld selelpagwe
      361 kiedpvygvy yvdhinrktq yenpvleakr kkqleqqqqp peewteecps lpppaapnhv
      421 snnqeavrea pvqgkpfftr npselkgkfi htklrkssrg fgftvvggde pdeflqiksl
      481 vldgpaaldg kmetgdvivs vndtcvlght haqvvkifqs ipigasvdle lcrgyplpfd
      541 pddpntslvt svaildkepi ivngqenyds pashssktgk vngtkearps spaevssngp
      601 hgypndtvsl assiatqpel itvhivkgpm gfgftiadsp ggggqrvkqi vdsprcrglk
      661 egdlivevnk knvqslthnq vvdmliecpk gsevtllvqr gglpvpkksp ksqplerkds
      721 qnssqqsvss hrsghtaspa hstqvlpdya apeapaadqp dtsgqkkpdp fkiwaqsrsm
      781 yesrlpdyqe qdiflwrket gfgfrilggn epgepiyigh ivplgaadad grlrsgdeli
      841 cvdgtpvvgk shqlvvqlmq qaakqghvnl tvrrkvvytv pkaenevpsp asshhssnqp
      901 aslteekrtp qgsqnslntv ssgsgstsgi gsgggggsgv vsavvqpydv eirrgenegf
      961 gfvivssvsr peagttfagn acvamphkig riiegspadr cgklkvgdri lavngcsitn
     1021 kshsdivnli keagntvtlr iipgdessna tlltnaekia tittthtpqq ipqetrnntk
     1081 pkqesqfdfk ppqaaqdqdf ytvelergak gfgfslrggr eynmdlyvlr laedgpaerc
     1141 gkmrigdeil eingettknm kharaielik nggrkvrlfl krgdgsvpey dpssdrnspa
     1201 tgsqnvsemk papsdrrqhp ssessyppdl hkssqhgdkr tyvrdlkgsr efsrhpnehh
     1261 twngtsktnd hvpgrkters perrherqpe ravvngqkrr spekrregtr sadntlerre
     1321 rlerrrdlsp errrerspgr rrrslerlte prrsperrre nsldrrakss drrrersper
     1381 rlreervghr ereepgwkhe psrrhppeqr rrpykecstd lsi
//
LOCUS       XP_041320814            1264 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X26 [Pyrgilauda ruficollis].
ACCESSION   XP_041320814
VERSION     XP_041320814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1264
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X26"
                     /calculated_mol_wt=137575
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          297..326
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          355..386
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(370,381)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          449..533
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(449,470..474,476,497,499,505,507..508,530,532..533)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(460..466,478,481,511,515,518..519)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          618..701
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(631..637,648,651,678,682,685..686)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          707..784
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          816..900
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(827..833,845,848,878,882,885..886)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          973..1069
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(985..991,1016,1019,1049,1053,1056..1057)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1126..1208
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1137..1143,1155,1158,1188,1192,1195..1196)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1264
                     /gene="MAGI1"
                     /coded_by="XM_041464880.1:126..3920"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced degvhteeld selelpagwe
      361 kiedpvygvy yvdhinrktq yenpvleakr kkqleqqqqp peewteecps lpppaapnhv
      421 snnqeavrea pvqgkpfftr npselkgkfi htklrkssrg fgftvvggde pdeflqiksl
      481 vldgpaaldg kmetgdvivs vndtcvlght haqvvkifqs ipigasvdle lcrgyplpfd
      541 pddpntslvt svaildkepi ivngqenyds pashssktgk vngtkearps spaevssngp
      601 hgypndtvsl assiatqpel itvhivkgpm gfgftiadsp ggggqrvkqi vdsprcrglk
      661 egdlivevnk knvqslthnq vvdmliecpk gsevtllvqr gglpvpkksp ksqplerkds
      721 qnssqqsvss hrsghtaspa hstqvlpdya apeapaadqp dtsgqkkpdp fkiwaqsrsm
      781 yesrpmspsp atglskgere reinstsfge fpdyqeqdif lwrketgfgf rilggnepge
      841 piyighivpl gaadadgrlr sgdelicvdg tpvvgkshql vvqlmqqaak qghvnltvrr
      901 kvvytvpkae nevpspassh hssnqpaslt eekrtpqgsq nslntvssgs gstsgigsgg
      961 gggsgvvsav vqpydveirr genegfgfvi vssvsrpeag ttfagnacva mphkigriie
     1021 gspadrcgkl kvgdrilavn gcsitnkshs divnlikeag ntvtlriipg dessnatllt
     1081 naekiatitt thtpqqipqe trnntkpkqe sqfdfkppqa aqdqdfytve lergakgfgf
     1141 slrggreynm dlyvlrlaed gpaercgkmr igdeileing ettknmkhar aieliknggr
     1201 kvrlflkrgd gsvpeyamip pniaacmrnd klgescfylm ghnqtttpav tgtvppqvhk
     1261 myrk
//
LOCUS       XP_041320821            1232 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X27 [Pyrgilauda ruficollis].
ACCESSION   XP_041320821
VERSION     XP_041320821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1232
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X27"
                     /calculated_mol_wt=133965
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          297..326
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          355..386
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(370,381)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          449..533
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(449,470..474,476,497,499,505,507..508,530,532..533)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(460..466,478,481,511,515,518..519)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          618..701
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(631..637,648,651,678,682,685..686)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          707..784
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          816..900
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(827..833,845,848,878,882,885..886)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          973..1069
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(985..991,1016,1019,1049,1053,1056..1057)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1126..1208
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1137..1143,1155,1158,1188,1192,1195..1196)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1232
                     /gene="MAGI1"
                     /coded_by="XM_041464887.1:127..3825"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced degvhteeld selelpagwe
      361 kiedpvygvy yvdhinrktq yenpvleakr kkqleqqqqp peewteecps lpppaapnhv
      421 snnqeavrea pvqgkpfftr npselkgkfi htklrkssrg fgftvvggde pdeflqiksl
      481 vldgpaaldg kmetgdvivs vndtcvlght haqvvkifqs ipigasvdle lcrgyplpfd
      541 pddpntslvt svaildkepi ivngqenyds pashssktgk vngtkearps spaevssngp
      601 hgypndtvsl assiatqpel itvhivkgpm gfgftiadsp ggggqrvkqi vdsprcrglk
      661 egdlivevnk knvqslthnq vvdmliecpk gsevtllvqr gglpvpkksp ksqplerkds
      721 qnssqqsvss hrsghtaspa hstqvlpdya apeapaadqp dtsgqkkpdp fkiwaqsrsm
      781 yesrpmspsp atglskgere reinstsfge fpdyqeqdif lwrketgfgf rilggnepge
      841 piyighivpl gaadadgrlr sgdelicvdg tpvvgkshql vvqlmqqaak qghvnltvrr
      901 kvvytvpkae nevpspassh hssnqpaslt eekrtpqgsq nslntvssgs gstsgigsgg
      961 gggsgvvsav vqpydveirr genegfgfvi vssvsrpeag ttfagnacva mphkigriie
     1021 gspadrcgkl kvgdrilavn gcsitnkshs divnlikeag ntvtlriipg dessnatllt
     1081 naekiatitt thtpqqipqe trnntkpkqe sqfdfkppqa aqdqdfytve lergakgfgf
     1141 slrggreynm dlyvlrlaed gpaercgkmr igdeileing ettknmkhar aieliknggr
     1201 kvrlflkrgd gsvpeyggsn yenipffpgi tp
//
LOCUS       XP_041320830            1220 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X28 [Pyrgilauda ruficollis].
ACCESSION   XP_041320830
VERSION     XP_041320830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1220
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X28"
                     /calculated_mol_wt=132626
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          297..326
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          437..521
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(437,458..462,464,485,487,493,495..496,518,520..521)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(448..454,466,469,499,503,506..507)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          606..689
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(619..625,636,639,666,670,673..674)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          695..772
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          804..888
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(815..821,833,836,866,870,873..874)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          961..1057
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(973..979,1004,1007,1037,1041,1044..1045)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1114..1196
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1125..1131,1143,1146,1176,1180,1183..1184)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1220
                     /gene="MAGI1"
                     /coded_by="XM_041464896.1:127..3789"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced delpagweki edpvygvyyv
      361 dhinrktqye npvleakrkk qleqqqqppe ewteecpslp ppaapnhvsn nqeavreapv
      421 qgkpfftrnp selkgkfiht klrkssrgfg ftvvggdepd eflqikslvl dgpaaldgkm
      481 etgdvivsvn dtcvlghtha qvvkifqsip igasvdlelc rgyplpfdpd dpntslvtsv
      541 aildkepiiv ngqenydspa shssktgkvn gtkearpssp aevssngphg ypndtvslas
      601 siatqpelit vhivkgpmgf gftiadspgg ggqrvkqivd sprcrglkeg dlivevnkkn
      661 vqslthnqvv dmliecpkgs evtllvqrgg lpvpkkspks qplerkdsqn ssqqsvsshr
      721 sghtaspahs tqvlpdyaap eapaadqpdt sgqkkpdpfk iwaqsrsmye srpmspspat
      781 glskgerere instsfgefp dyqeqdiflw rketgfgfri lggnepgepi yighivplga
      841 adadgrlrsg delicvdgtp vvgkshqlvv qlmqqaakqg hvnltvrrkv vytvpkaene
      901 vpspasshhs snqpasltee krtpqgsqns lntvssgsgs tsgigsgggg gsgvvsavvq
      961 pydveirrge negfgfvivs svsrpeagtt fagnacvamp hkigriiegs padrcgklkv
     1021 gdrilavngc sitnkshsdi vnlikeagnt vtlriipgde ssnatlltna ekiatittth
     1081 tpqqipqetr nntkpkqesq fdfkppqaaq dqdfytvele rgakgfgfsl rggreynmdl
     1141 yvlrlaedgp aercgkmrig deileinget tknmkharai eliknggrkv rlflkrgdgs
     1201 vpeyggsnye nipffpgitp
//
LOCUS       XP_041320839            1254 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 1 isoform X29 [Pyrgilauda ruficollis].
ACCESSION   XP_041320839
VERSION     XP_041320839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1254
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 1 isoform X29"
                     /calculated_mol_wt=136451
     Region          14..94
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(27..33,44,74,78,81..82)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          113..260
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          297..326
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(311,322)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          437..521
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(437,458..462,464,485,487,493,495..496,518,520..521)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(448..454,466,469,499,503,506..507)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          606..689
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(619..625,636,639,666,670,673..674)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          695..772
                     /region_name="MAGI_u5"
                     /note="Unstructured region on MAGI; pfam16666"
                     /db_xref="CDD:465224"
     Region          804..888
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(815..821,833,836,866,870,873..874)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          961..1057
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(973..979,1004,1007,1037,1041,1044..1045)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1116..1198
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1127..1133,1145,1148,1178,1182,1185..1186)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1254
                     /gene="MAGI1"
                     /coded_by="XM_041464905.1:125..3889"
                     /db_xref="GeneID:121352075"
ORIGIN      
        1 msrvvqkknh wssrvrqcal trgpggqlgf allggaehge fpyagaaagd geaalsegel
       61 llevqgvrvs glprydvlev irsckdpivv kavrqgsrln kdlrhylnqr fqkgspdhdl
      121 qqtirdnlyr havpcttrpp regevpgvdy nfltveefle lersgtllev gtyegnyygt
      181 pkppsqplsg kvtstnalqn lqsgskqstp krtksyndmq nagivhtene eeddvpemss
      241 sftaesgdqd ehsahigrea appstierht hvpttepsqn lpqylppsae dnlgplpenw
      301 emaytengev yfidhntktt swldprclnk qqkpleeced delpagweki edpvygvyyv
      361 dhinrktqye npvleakrkk qleqqqqppe ewteecpslp ppaapnhvsn nqeavreapv
      421 qgkpfftrnp selkgkfiht klrkssrgfg ftvvggdepd eflqikslvl dgpaaldgkm
      481 etgdvivsvn dtcvlghtha qvvkifqsip igasvdlelc rgyplpfdpd dpntslvtsv
      541 aildkepiiv ngqenydspa shssktgkvn gtkearpssp aevssngphg ypndtvslas
      601 siatqpelit vhivkgpmgf gftiadspgg ggqrvkqivd sprcrglkeg dlivevnkkn
      661 vqslthnqvv dmliecpkgs evtllvqrgg lpvpkkspks qplerkdsqn ssqqsvsshr
      721 sghtaspahs tqvlpdyaap eapaadqpdt sgqkkpdpfk iwaqsrsmye srpmspspat
      781 glskgerere instsfgefp dyqeqdiflw rketgfgfri lggnepgepi yighivplga
      841 adadgrlrsg delicvdgtp vvgkshqlvv qlmqqaakqg hvnltvrrkv vytvpkaene
      901 vpspasshhs snqpasltee krtpqgsqns lntvssgsgs tsgigsgggg gsgvvsavvq
      961 pydveirrge negfgfvivs svsrpeagtt fagnacvamp hkigriiegs padrcgklkv
     1021 gdrilavngc sitnkshsdi vnlikeagnt vtlriipgde ssnatlltna ekiatittth
     1081 tpqqipqets rnntkpkqes qfdfkppqaa qqdqdfytve lergakgfgf slrggreynm
     1141 dlyvlrlaed gpaercgkmr igdeileing ettknmkhar aieliknggr kvrlflkrgd
     1201 gsvpeyamip pniaacmrnd klgescfylm ghnqtttpav tgtvppqvhk myrk
//
LOCUS       XP_041320853             552 aa            linear   VRT 06-MAY-2021
DEFINITION  cilia- and flagella-associated protein 100 [Pyrgilauda ruficollis].
ACCESSION   XP_041320853
VERSION     XP_041320853.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464919.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..552
                     /product="cilia- and flagella-associated protein 100"
                     /calculated_mol_wt=64591
     Region          119..237
                     /region_name="DUF4200"
                     /note="Domain of unknown function (DUF4200); pfam13863"
                     /db_xref="CDD:464003"
     CDS             1..552
                     /gene="CFAP100"
                     /coded_by="XM_041464919.1:19..1677"
                     /db_xref="GeneID:121352187"
ORIGIN      
        1 methlvlpes teedeknpmk npfkvpsdte lfsmrdkeik kaqkererrk tmkvhektty
       61 stkmkaksgl rkalkteeee esrkeatcee rlkclqemls rklamkkdya fdretfhgyl
      121 qdrkqiffle htiavkrgei ekmeniakde ekklqkaerr mekdtamfde flkenhnnsv
      181 ealriakret saktkkitei qgltteikki qsdisrfedt lqeykmyrdi lyqlspkewq
      241 eehrkrhkke kdketesrne gsashpstte qdqgptdtah svtftdipss llfsesldfr
      301 srdvrpqlkh flkpllsrdl ssledaesei ssdedeepel yftdpeqllt tfmemldenl
      361 sfvlnsqdia enwnkvqqtf ittresteke laalkeqvnt lrasvakeee kvadlklkvq
      421 lfssgedegd dqdkmltsln kkvqevyfqc tgdnetnlpt vemlkviekq lndlldsver
      481 ippakiekav kdirkeqrar lreekqkqak qqqdeglkrd mersqvpeek ksyktmalps
      541 npharknsqg nr
//
LOCUS       XP_041320866             576 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320866
VERSION     XP_041320866.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464932.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..576
                     /product="rho guanine nucleotide exchange factor 3 isoform
                     X1"
                     /calculated_mol_wt=65522
     Region          181..357
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          371..503
                     /region_name="PH_RhoGEF3_XPLN"
                     /note="Rho guanine nucleotide exchange factor 3 Pleckstrin
                     homology (PH) domain; cd10572"
                     /db_xref="CDD:269976"
     CDS             1..576
                     /gene="ARHGEF3"
                     /coded_by="XM_041464932.1:93..1823"
                     /db_xref="GeneID:121352194"
ORIGIN      
        1 mpgaeqepdg arkkmnsess altmsspavi nqcarggmeq ekiwpkqqqq nnfslfsstk
       61 gwnfrgkkrk qstqdedtis icsldsseps nkrvkplsrv tslaslippv ratplkrfsq
      121 tlqrsisfrs esrpdllspr pwsrnvppas tkrrdsklws etfdvcvnhm ltskeikrqe
      181 aifelsqgee dliedlklak kayhdpmlkl simteqelnq ifgtldslip lhedllrrlq
      241 evrkpdgstd hvghilvgwl pclnsydsyc snqvaakall dhkkqdhrvq dflqrclesp
      301 fsrkldlwnf ldiprsrlvk yplllreilr htpndhpdqq hleeainiiq givaeinvkt
      361 gesecqyyke rliyleegqr dslidnsrav cchgelknnr gvklhvflfe evlvitravt
      421 hneqlcyqly rqpipvrell ledlqdgevr lggslrgafs nneriknffr vsfkngsqsq
      481 thslqandsf nkqqwlncir qakeraacag tagglearvp vspqgcrapq gealeqmeqs
      541 dcesdcsmdt selgadcerm eqtnscesqk qietnv
//
LOCUS       XP_041320875             521 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320875
VERSION     XP_041320875.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464941.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..521
                     /product="rho guanine nucleotide exchange factor 3 isoform
                     X2"
                     /calculated_mol_wt=59415
     Region          126..302
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          316..448
                     /region_name="PH_RhoGEF3_XPLN"
                     /note="Rho guanine nucleotide exchange factor 3 Pleckstrin
                     homology (PH) domain; cd10572"
                     /db_xref="CDD:269976"
     CDS             1..521
                     /gene="ARHGEF3"
                     /coded_by="XM_041464941.1:137..1702"
                     /db_xref="GeneID:121352194"
ORIGIN      
        1 mvakdypfyl sakranfale aqtvtspake teepsnkrvk plsrvtslas lippvratpl
       61 krfsqtlqrs isfrsesrpd llsprpwsrn vppastkrrd sklwsetfdv cvnhmltske
      121 ikrqeaifel sqgeedlied lklakkayhd pmlklsimte qelnqifgtl dsliplhedl
      181 lrrlqevrkp dgstdhvghi lvgwlpclns ydsycsnqva akalldhkkq dhrvqdflqr
      241 clespfsrkl dlwnfldipr srlvkyplll reilrhtpnd hpdqqhleea iniiqgivae
      301 invktgesec qyykerliyl eegqrdslid nsravcchge lknnrgvklh vflfeevlvi
      361 travthneql cyqlyrqpip vrellledlq dgevrlggsl rgafsnneri knffrvsfkn
      421 gsqsqthslq andsfnkqqw lncirqaker aacagtaggl earvpvspqg crapqgeale
      481 qmeqsdcesd csmdtselga dcermeqtns cesqkqietn v
//
LOCUS       XP_041320886             521 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320886
VERSION     XP_041320886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..521
                     /product="rho guanine nucleotide exchange factor 3 isoform
                     X3"
                     /calculated_mol_wt=59591
     Region          126..302
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          316..448
                     /region_name="PH_RhoGEF3_XPLN"
                     /note="Rho guanine nucleotide exchange factor 3 Pleckstrin
                     homology (PH) domain; cd10572"
                     /db_xref="CDD:269976"
     CDS             1..521
                     /gene="ARHGEF3"
                     /coded_by="XM_041464952.1:86..1651"
                     /db_xref="GeneID:121352194"
ORIGIN      
        1 mvwcclfvhh qkkrkqstqd edtisicsld ssepsnkrvk plsrvtslas lippvratpl
       61 krfsqtlqrs isfrsesrpd llsprpwsrn vppastkrrd sklwsetfdv cvnhmltske
      121 ikrqeaifel sqgeedlied lklakkayhd pmlklsimte qelnqifgtl dsliplhedl
      181 lrrlqevrkp dgstdhvghi lvgwlpclns ydsycsnqva akalldhkkq dhrvqdflqr
      241 clespfsrkl dlwnfldipr srlvkyplll reilrhtpnd hpdqqhleea iniiqgivae
      301 invktgesec qyykerliyl eegqrdslid nsravcchge lknnrgvklh vflfeevlvi
      361 travthneql cyqlyrqpip vrellledlq dgevrlggsl rgafsnneri knffrvsfkn
      421 gsqsqthslq andsfnkqqw lncirqaker aacagtaggl earvpvspqg crapqgeale
      481 qmeqsdcesd csmdtselga dcermeqtns cesqkqietn v
//
LOCUS       XP_041320899            2610 aa            linear   VRT 06-MAY-2021
DEFINITION  stabilin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320899
VERSION     XP_041320899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2610
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2610
                     /product="stabilin-1 isoform X1"
                     /calculated_mol_wt=282579
     Region          392..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          506..645
                     /region_name="FAS1"
                     /note="Uncaracterized surface protein containing fasciclin
                     (FAS1) repeats [General function prediction only];
                     COG2335"
                     /db_xref="CDD:441906"
     Region          835..862
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          874..905
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          917..948
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          954..990
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1007..1122
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          1142..1259
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; cl02663"
                     /db_xref="CDD:470649"
     Region          1431..1464
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1470..1506
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1512..1547
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1555..1591
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          <1603..1722
                     /region_name="FAS1"
                     /note="Uncaracterized surface protein containing fasciclin
                     (FAS1) repeats [General function prediction only];
                     COG2335"
                     /db_xref="CDD:441906"
     Region          1747..1877
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          2117..2152
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          2158..2195
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          2230..2322
                     /region_name="Link_Domain"
                     /note="The link domain is a hyaluronan (HA)-binding
                     domain. It functions to mediate adhesive interactions
                     during inflammatory leukocyte homing and tumor metastasis.
                     It is found in the CD44 receptor and in human TSG-6. TSG-6
                     is the protein product of the tumor...; cl02612"
                     /db_xref="CDD:470631"
     Site            2240..2241
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239592"
     Region          2388..2485
                     /region_name="FAS1"
                     /note="Four repeated domains in the Fasciclin I family of
                     proteins, present in many other contexts; smart00554"
                     /db_xref="CDD:214719"
     CDS             1..2610
                     /gene="STAB1"
                     /coded_by="XM_041464965.1:230..8062"
                     /db_xref="GeneID:121352205"
ORIGIN      
        1 mkmhppgllf fflaacftpt adcqsqklks mrcnvktmft lntactscaa vpkmlcprgw
       61 lkttqrsgvr dcrysvklge ntlslpgchh mckkeieekk ccpgfwgtec yecpgssenp
      121 cnghgtcldg iqqngtcice eqysgygcqn crdenrfgpd cqsecdcvhg ecnsgtagng
      181 sctcyggytg prcdqelalc rgvtceanse cvvrdgtalc dcklgyrkqg stcqaqdpcv
      241 pspcspfavc kalgprtyec tckegfqgdg kicqpinpcv dsnggcpens ticiyrrpge
      301 atcvcksgms rrtpssecla fpsdcrqylc dvtatcgins qgtpscvcke geigdgrscy
      361 kdllgeinqq nlrgrfirkl nvakkmfasg cstlltkygp ftvfvpsllp ildrmefndt
      421 aaeqlcrmhi vpglhliedm iktktmwtls ghqltfnsqt yiksfryqdl pgelynilqs
      481 nlpaangimh ivnslrkkts tdnlrnpqkt igeilasmei fsrfetilen cglpaildgp
      541 gpftvfvpsn davdrlrdgr liylftegin klqelvkhhi ytsaavtvgq lmmmphivtm
      601 anqiltinis adgrilmdes giplkmrdiv asngiihtld gifippsivp ilphrcneeq
      661 hkivmgscvd cevlnnsicp pgskemeatl spkecvyihd pkglnvlkkg carycnqtit
      721 kpgcckgffg pdcmpcpggf sspcygrgnc sdgiqgngnc hcfegfkgta chicanpnkh
      781 gencdedcgc vhgvcdnrpg sggvcqswsc kegytgkfcd ktskncgpsg lsqychqhav
      841 cslndtarci cmdgyegdgf scqpidlcsq perggcsqna lctstgpgta tcqcnvgwtg
      901 dgkacvpidn cvlesrgnch lnadcvytgp gqskcvckrg yagdghscda inpclmdngg
      961 chdlatcvpl gggerscacs egyfgdgmtc ygdilkelar nshfvgfynw vkkslfsipa
     1021 ganvtvlvps eaaiknlsta dkdfwltpym lpvlvrahfl egvftaeklk kygpelptln
     1081 pqtrwqintt sgvltiqnas vvvsdipasn giihvlskvl lpspgdipps ppglqeqlsr
     1141 vasfsifqel leeyqligkv esseqytifv pgnnsieeyc raanvtqldn etvqyhiilg
     1201 ekllpadlrs gvhknsmlgl sywlmfyqns tqkfvnnipl dgksfetrng iligvsqvlq
     1261 vqknrctant ttilksrcgk cdkgikcpsg svlleplgrg nlancrlrsa gagttgchft
     1321 cakvsltsvc cpgyyghmce mcpgkpgrwc sgngecqdgi qgsgecrcle gfhgtacemc
     1381 evgrygadck secacdngic ndglrgdgsc ecfpgwtgpt cqerikidlc nntchqmanc
     1441 lnsstdsqpt cfcsagytgn gthcteidpc ttdhggcsvh avctkvspge rtcackegya
     1501 gdgtlcmeid lclesnggch tnaeciktgp kkvacnclpg ysgdgvsqcn pinlceqnng
     1561 gcspfglcky tgpgtrncsc swhsigdgft crgklhqelg ripdasmffr miqaesikel
     1621 sgagpftvfv pqtdfigntt vfeewksrgl lrdllryhmv gcqkllssdl egqesltsls
     1681 ghkikitvne nsitlneeak vvtsdivgvn gvihfinkil ipsglvghni ssklsqqnit
     1741 dvaeafgyti yskllqdael lpllgnpvhr pftllwptna afgalpekqq kflyrrehrd
     1801 vlasylkahi irdtkivagn vpqvetirsm hgstisfscs kahvgeillg ngdatiiqrh
     1861 mefnggiayg idrlleppdl gsrcdeftli elqgsaescg lcgfeppcpa gsvqrgetrr
     1921 cyyygnyllr ntflfhhnsl lrpawpphsp wdpfrrhfss rgplrrgcrr scvsshwvpq
     1981 ccanhygrdc racpggletp cnnrgtcddk iggsgicncs qefigtgcel capgrygpec
     2041 recnctengv cngglhgdgf cfcaegwtgd rceirlvvtp tcsppchaqa acragnlcec
     2101 dlhyegdgrt csvidmcsqd nggcarhaqc sqtgvnvsca ctpgyrgdgy icepidrcad
     2161 grngdcseha lcistgpner rceckqgyvg dgiqcleeav pptdrcledn gqchreaict
     2221 dlhfhdktmg vfhlqsprkk ydftyeqaqa acaaegasla tfqqlaaaqq mgfhlclvgw
     2281 ldngtagypt aypnpscgss rvgivdygsr snlsetwdaf cyrekdvtcs crdgfvgdgy
     2341 wcsgklpdvl adqdrfstfy smllnfangt eegldffmyl sdisapktlf aplnsgfadn
     2401 etltgeelkl hvsssnvilf sfnlttgtii psqsgydlhv sdlpasnssk hsdakgindt
     2461 mivewdiiaf ngiihviaep lrippplvhv gqvngaaqgp gsvatgtlsa lgfalalvag
     2521 agvayycvrr rrqlgqfgyy qadlrgdeeq eddeaqprpe ragprtarpr pqrplvaipn
     2581 plygghapdy eplhdpplad tgtdplgfpq
//
LOCUS       XP_041320911            2515 aa            linear   VRT 06-MAY-2021
DEFINITION  stabilin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320911
VERSION     XP_041320911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464977.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2515
                     /product="stabilin-1 isoform X2"
                     /calculated_mol_wt=271705
     Region          105..139
                     /region_name="EGF_MSP1_1"
                     /note="MSP1 EGF domain 1; pfam12946"
                     /db_xref="CDD:403985"
     Region          297..400
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          411..550
                     /region_name="FAS1"
                     /note="Uncaracterized surface protein containing fasciclin
                     (FAS1) repeats [General function prediction only];
                     COG2335"
                     /db_xref="CDD:441906"
     Region          740..767
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          779..810
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          822..853
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          859..895
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          912..1027
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          1047..1164
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; cl02663"
                     /db_xref="CDD:470649"
     Region          1336..1369
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1375..1411
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1417..1452
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1460..1496
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          <1508..1627
                     /region_name="FAS1"
                     /note="Uncaracterized surface protein containing fasciclin
                     (FAS1) repeats [General function prediction only];
                     COG2335"
                     /db_xref="CDD:441906"
     Region          1652..1782
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          2022..2057
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          2063..2100
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          2135..2227
                     /region_name="Link_Domain"
                     /note="The link domain is a hyaluronan (HA)-binding
                     domain. It functions to mediate adhesive interactions
                     during inflammatory leukocyte homing and tumor metastasis.
                     It is found in the CD44 receptor and in human TSG-6. TSG-6
                     is the protein product of the tumor...; cl02612"
                     /db_xref="CDD:470631"
     Site            2145..2146
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239592"
     Region          2293..2390
                     /region_name="FAS1"
                     /note="Four repeated domains in the Fasciclin I family of
                     proteins, present in many other contexts; smart00554"
                     /db_xref="CDD:214719"
     CDS             1..2515
                     /gene="STAB1"
                     /coded_by="XM_041464977.1:26..7573"
                     /db_xref="GeneID:121352205"
ORIGIN      
        1 mamghvwmvy skmghasars ntvgmaarta gmkivlaqtv sqsvtvctgn ataallgmga
       61 ahameatqap gvtkifckvn yifyqwptcs kgnslccvta elalcrgvtc eansecvvrd
      121 gtalcdcklg yrkqgstcqa qdpcvpspcs pfavckalgp rtyectckeg fqgdgkicqp
      181 inpcvdsngg cpensticiy rrpgeatcvc ksgmsrrtps seclafpsdc rqylcdvtat
      241 cginsqgtps cvckegeigd grscykdllg einqqnlrgr firklnvakk mfasgcstll
      301 tkygpftvfv psllpildrm efndtaaeql crmhivpglh liedmiktkt mwtlsghqlt
      361 fnsqtyiksf ryqdlpgely nilqsnlpaa ngimhivnsl rkktstdnlr npqktigeil
      421 asmeifsrfe tilencglpa ildgpgpftv fvpsndavdr lrdgrliylf teginklqel
      481 vkhhiytsaa vtvgqlmmmp hivtmanqil tinisadgri lmdesgiplk mrdivasngi
      541 ihtldgifip psivpilphr cneeqhkivm gscvdcevln nsicppgske meatlspkec
      601 vyihdpkgln vlkkgcaryc nqtitkpgcc kgffgpdcmp cpggfsspcy grgncsdgiq
      661 gngnchcfeg fkgtachica npnkhgencd edcgcvhgvc dnrpgsggvc qswsckegyt
      721 gkfcdktskn cgpsglsqyc hqhavcslnd tarcicmdgy egdgfscqpi dlcsqpergg
      781 csqnalctst gpgtatcqcn vgwtgdgkac vpidncvles rgnchlnadc vytgpgqskc
      841 vckrgyagdg hscdainpcl mdnggchdla tcvplggger scacsegyfg dgmtcygdil
      901 kelarnshfv gfynwvkksl fsipaganvt vlvpseaaik nlstadkdfw ltpymlpvlv
      961 rahflegvft aeklkkygpe lptlnpqtrw qinttsgvlt iqnasvvvsd ipasngiihv
     1021 lskvllpspg dippsppglq eqlsrvasfs ifqelleeyq ligkvesseq ytifvpgnns
     1081 ieeycraanv tqldnetvqy hiilgekllp adlrsgvhkn smlglsywlm fyqnstqkfv
     1141 nnipldgksf etrngiligv sqvlqvqknr ctantttilk srcgkcdkgi kcpsgsvlle
     1201 plgrgnlanc rlrsagagtt gchftcakvs ltsvccpgyy ghmcemcpgk pgrwcsgnge
     1261 cqdgiqgsge crclegfhgt acemcevgry gadcksecac dngicndglr gdgscecfpg
     1321 wtgptcqeri kidlcnntch qmanclnsst dsqptcfcsa gytgngthct eidpcttdhg
     1381 gcsvhavctk vspgertcac kegyagdgtl cmeidlcles nggchtnaec iktgpkkvac
     1441 nclpgysgdg vsqcnpinlc eqnnggcspf glckytgpgt rncscswhsi gdgftcrgkl
     1501 hqelgripda smffrmiqae sikelsgagp ftvfvpqtdf ignttvfeew ksrgllrdll
     1561 ryhmvgcqkl lssdlegqes ltslsghkik itvnensitl neeakvvtsd ivgvngvihf
     1621 inkilipsgl vghnisskls qqnitdvaea fgytiyskll qdaellpllg npvhrpftll
     1681 wptnaafgal pekqqkflyr rehrdvlasy lkahiirdtk ivagnvpqve tirsmhgsti
     1741 sfscskahvg eillgngdat iiqrhmefng giaygidrll eppdlgsrcd eftlielqgs
     1801 aescglcgfe ppcpagsvqr getrrcyyyg nyllrntflf hhnsllrpaw pphspwdpfr
     1861 rhfssrgplr rgcrrscvss hwvpqccanh ygrdcracpg gletpcnnrg tcddkiggsg
     1921 icncsqefig tgcelcapgr ygpecrecnc tengvcnggl hgdgfcfcae gwtgdrceir
     1981 lvvtptcspp chaqaacrag nlcecdlhye gdgrtcsvid mcsqdnggca rhaqcsqtgv
     2041 nvscactpgy rgdgyicepi drcadgrngd csehalcist gpnerrceck qgyvgdgiqc
     2101 leeavpptdr cledngqchr eaictdlhfh dktmgvfhlq sprkkydfty eqaqaacaae
     2161 gaslatfqql aaaqqmgfhl clvgwldngt agyptaypnp scgssrvgiv dygsrsnlse
     2221 twdafcyrek dvtcscrdgf vgdgywcsgk lpdvladqdr fstfysmlln fangteegld
     2281 ffmylsdisa pktlfaplns gfadnetltg eelklhvsss nvilfsfnlt tgtiipsqsg
     2341 ydlhvsdlpa snsskhsdak gindtmivew diiafngiih viaeplripp plvhvgqvng
     2401 aaqgpgsvat gtlsalgfal alvagagvay ycvrrrrqlg qfgyyqadlr gdeeqeddea
     2461 qprperagpr tarprpqrpl vaipnplygg hapdyeplhd ppladtgtdp lgfpq
//
LOCUS       XP_041320924             561 aa            linear   VRT 06-MAY-2021
DEFINITION  5'-nucleotidase domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041320924
VERSION     XP_041320924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041464990.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..561
                     /product="5'-nucleotidase domain-containing protein 2"
                     /calculated_mol_wt=64764
     Region          105..538
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; pfam05761"
                     /db_xref="CDD:461733"
     CDS             1..561
                     /gene="NT5DC2"
                     /coded_by="XM_041464990.1:79..1764"
                     /db_xref="GeneID:121352222"
ORIGIN      
        1 maalgsaalr rgggaaprll avavscqscr hkatgdgghg qpreqhpaap grvggqpvpa
       61 egadtktylw aryhemkklv ydllppgvcn llnpaaiyan neislgdvei ygfdydytla
      121 qysnllhsmi fntardilie qfkypeglgk ydyipgfair glhydvqksl lmkidafhyv
      181 qlgtayrglk pvpdeeviel yggtqhiply qmsdfygkgp slkqfmdifs lpemtllssv
      241 idyfithgie fdqvhlykdi sdairdvhvk gvmykwiekd meqyilhgde iyavlnrlvn
      301 hkkklflitn spfsfvdkgm khmvgknwrd lfdmvivqad kpnfftdrrk pfrklddkgs
      361 lqwdkinqle kgkiykegnl fdflrltgwr gskvlyfgdh lysdladlml rhgwrtgaiv
      421 peleteirii nteqymhslt wqqaltglle rmqmyqdaes kqvllewmke rqeirsltkn
      481 lfnpqfgsif rtfhnptyfs rrlvrfsdiy masiscllny dvnftfyprr tplqheaplw
      541 mdqlctgcmk tpfleemvhi r
//
LOCUS       XP_041320937             797 aa            linear   VRT 06-MAY-2021
DEFINITION  ATR-interacting protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320937
VERSION     XP_041320937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465003.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="ATR-interacting protein isoform X1"
                     /calculated_mol_wt=87497
     Region          107..>206
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..797
                     /gene="LOC121352227"
                     /coded_by="XM_041465003.1:43..2436"
                     /db_xref="GeneID:121352227"
ORIGIN      
        1 maalpgprkr sgaalcgdsg aaaappalrn vlpphkrpks altgivdpfg dsddftaddl
       61 eqidilasqa lsqdppagha wgapelprgg rqagsraedg lmrdafqfev lqtqheevkq
      121 klkemqdeil tkngeikilr dsmqqmeham eeqkksylll eqqksqilse kekefskklq
      181 slhselqfkd aemnelrtrl qncernkhls qavpatspkk nlvvqgkseg cspqperrsf
      241 ptkesfnaem strpscssgn lvslttsike drkithpevs slkqhkatgk ngsynsvpkr
      301 ktqgsillna lmkqpivpgs llgfchllss dseplpgavl ppnsldmkpt qlpssrttqe
      361 giaplvslqe aqklaitgln lialdeglse gspaegqggl lpltqsriqg avhllplveh
      421 hvgafcqaeq lgdapgngac gthpaaasra stnsgsgked frlsleettl vslgilyylv
      481 fyswdvvhtl lsaemgnssa agdeqvskmd knvlcdnqcd nkeesrtqgg lppqdpastd
      541 raqhslfkkl lqiltfsaar gsqtdnilsq slkvlvklae nstmdllinf qhllrsqalq
      601 lclrpetpvp avlltvrllc alaqhhllva qlcshsdtcl llalymyits rpdksaseml
      661 wlqleqetvr lltrcmwcsr pavlfpgtdc qcylevvkal ivmlhrqwmk irseisscah
      721 rerviqflrd avlllhslsq kdklfhehcl evlhqydqam pgirailkkt qklsaseeli
      781 ldelyppepe eqgtdss
//
LOCUS       XP_041320945             796 aa            linear   VRT 06-MAY-2021
DEFINITION  ATR-interacting protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320945
VERSION     XP_041320945.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465011.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..796
                     /product="ATR-interacting protein isoform X2"
                     /calculated_mol_wt=87426
     Region          98..>201
                     /region_name="OmpH"
                     /note="Outer membrane protein (OmpH-like); pfam03938"
                     /db_xref="CDD:461098"
     CDS             1..796
                     /gene="LOC121352227"
                     /coded_by="XM_041465011.1:43..2433"
                     /db_xref="GeneID:121352227"
ORIGIN      
        1 maalpgprkr sgaalcgdsg aaaappalrn vlpphkrpks altgivdpfg dsddftaddl
       61 eqidilasqa lsqdppagha wgapelprgg rqgsraedgl mrdafqfevl qtqheevkqk
      121 lkemqdeilt kngeikilrd smqqmehame eqkksyllle qqksqilsek ekefskklqs
      181 lhselqfkda emnelrtrlq ncernkhlsq avpatspkkn lvvqgksegc spqperrsfp
      241 tkesfnaems trpscssgnl vslttsiked rkithpevss lkqhkatgkn gsynsvpkrk
      301 tqgsillnal mkqpivpgsl lgfchllssd seplpgavlp pnsldmkptq lpssrttqeg
      361 iaplvslqea qklaitglnl ialdeglseg spaegqggll pltqsriqga vhllplvehh
      421 vgafcqaeql gdapgngacg thpaaasras tnsgsgkedf rlsleettlv slgilyylvf
      481 yswdvvhtll saemgnssaa gdeqvskmdk nvlcdnqcdn keesrtqggl ppqdpastdr
      541 aqhslfkkll qiltfsaarg sqtdnilsqs lkvlvklaen stmdllinfq hllrsqalql
      601 clrpetpvpa vlltvrllca laqhhllvaq lcshsdtcll lalymyitsr pdksasemlw
      661 lqleqetvrl ltrcmwcsrp avlfpgtdcq cylevvkali vmlhrqwmki rseisscahr
      721 erviqflrda vlllhslsqk dklfhehcle vlhqydqamp girailkktq klsaseelil
      781 delyppepee qgtdss
//
LOCUS       XP_041320963            1089 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamate receptor-interacting protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041320963
VERSION     XP_041320963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465029.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1089
                     /product="glutamate receptor-interacting protein 2"
                     /calculated_mol_wt=118691
     Region          52..134
                     /region_name="PDZ1_GRIP1-2-like"
                     /note="PDZ domain 1 of glutamate receptor-interacting
                     protein 1 (GRIP1) and GRIP2, and related domains; cd06687"
                     /db_xref="CDD:467175"
     Site            order(63..69,81,84,114,118,121..122)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467175"
     Region          150..238
                     /region_name="PDZ2_GRIP1-2-like"
                     /note="PDZ domain 2 of glutamate receptor-interacting
                     protein 1 (GRIP1) and GRIP2, and related domains; cd06681"
                     /db_xref="CDD:467169"
     Site            order(162..168,184,187,217,221,224..225)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467169"
     Region          250..335
                     /region_name="PDZ3_GRIP1-2-like"
                     /note="PDZ domain 3 of glutamate receptor-interacting
                     protein 1 (GRIP1) and GRIP2, and related domains; cd06684"
                     /db_xref="CDD:467172"
     Site            order(263..269,282,285,315,319,322..323)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467172"
     Region          454..554
                     /region_name="PDZ4_GRIP1-2-like"
                     /note="PDZ domain 4 of glutamate receptor-interacting
                     protein 1 (GRIP1) and GRIP2, and related domains; cd06686"
                     /db_xref="CDD:467174"
     Site            order(459..462,503..504,506..508,547,549..554)
                     /site_type="other"
                     /note="PDZ5 interface [polypeptide binding]"
                     /db_xref="CDD:467174"
     Site            order(472..478,494,497,527,531,534..535)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467174"
     Region          562..645
                     /region_name="PDZ5_GRIP1-2-like"
                     /note="PDZ domain 5 of glutamate receptor-interacting
                     protein 1 (GRIP1) and GRIP2, and related domains; cd06682"
                     /db_xref="CDD:467170"
     Site            order(573..579,592,595,625,629,632..633)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467170"
     Region          658..742
                     /region_name="PDZ6_GRIP1-2-like"
                     /note="PDZ domain 6 of glutamate receptor-interacting
                     protein 1 (GRIP1) and GRIP2, and related domains; cd06683"
                     /db_xref="CDD:467171"
     Site            order(671..677,689,692,722,726,729..730)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467171"
     Region          971..1055
                     /region_name="PDZ7_GRIP1-2-like"
                     /note="PDZ domain 7 of glutamate receptor-interacting
                     protein 1 (GRIP1) and GRIP2, and related domains; cd06685"
                     /db_xref="CDD:467173"
     Site            order(986..992,1003,1006,1035,1039,1042..1043)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467173"
     Site            order(1025,1028,1033,1036..1037,1040..1041)
                     /site_type="other"
                     /note="GRASP-1 binding site [polypeptide binding]"
                     /db_xref="CDD:467173"
     CDS             1..1089
                     /gene="GRIP2"
                     /coded_by="XM_041465029.1:45..3314"
                     /db_xref="GeneID:121352239"
ORIGIN      
        1 mpgwrkslal clqrmqeddd gpyskgskds ggmdaalvsr rqsipeefrg vtivelikke
       61 gstlgltisg gtdkdgkprv snlrpgglaa rsdqlnvgdy iksvnginlt klrhdeiisl
      121 lknvgervvl eveyelppav pessagiipk tievslykeg nsfgfvlrgg ahedwhksrp
      181 lvltyvrpgg padregslki gdrllsvdgi plhsmthada lnilrqcsqe alfqieydvt
      241 imdtvanasg pllveiaktp gstlgitltt amhrnkqviv idkikpasvv drcgalhvgd
      301 hilsidgtst ehcslleatq llaatsenvk leilpvhqsr lplkppetvk vqksdhhhcw
      361 dpcvnychth hpghcktptw tqtsgqdyck slvaanfssp tmnaqgfpcq nsntlprssh
      421 pmsprttmlr rrqkkkehks slslasstvg pggqivhtet tevvlrgdpl ngfglqlqgg
      481 ifatetlssp plvrfiepds paercgllqv gdrvlsingi atedgtmeea nqllrdaalt
      541 nkvvleiefd vaesvipssg tfhvklpkkr gvelgitiss asrklgdpli isdikkgsva
      601 hrtgtlepgd kllaidnirl dncsmedavq ilrqcedlvk lkirkdedns deqettgaii
      661 ytvelkrygg plgitisgte epfdpivisg ltkrglaert gaihvgdril ainnvslkgk
      721 plseaihllq magetvtlki kkqteksypk ksgsinevsd pedeltdsqk tsklseiyst
      781 tipsvdntve swdgsaidag ygsqgtyipq aagialhphe wrhsrqksst ppadprknyp
      841 ymdgsfsedd wdkpgrypnr qngletthed nfwrvfgeal edletcgqse llreieasim
      901 tgsvhnlgle gskllldsvn psgmsplrka nssctdgqte gssspakkne rnldmkkmek
      961 emqeimsptp lefhkmtlhk dpesedfgfs lsdglleksv yvnmvrpdgp adqcglkpyd
     1021 rvlqvnrirt rdfdcclavp liseagdkld lvisrnplal aanapseenr elpaqvphsa
     1081 evkasvqtl
//
LOCUS       XP_041320975             867 aa            linear   VRT 06-MAY-2021
DEFINITION  scm-like with four MBT domains protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041320975
VERSION     XP_041320975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..867
                     /product="scm-like with four MBT domains protein 1"
                     /calculated_mol_wt=97679
     Region          47..140
                     /region_name="MBT_SFMBT1_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Scm-like with four MBT domains protein 1 (SFMBT1);
                     cd20111"
                     /db_xref="CDD:439101"
     Site            order(60,63,66,68,84,87,93)
                     /site_type="other"
                     /note="putative methyllysine peptide binding site
                     [polypeptide binding]"
                     /db_xref="CDD:439101"
     Region          159..248
                     /region_name="MBT_SFMBT1_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Scm-like with four MBT domains protein 1 (SFMBT1);
                     cd20113"
                     /db_xref="CDD:439103"
     Site            order(172,175,178,180,196,199,205)
                     /site_type="other"
                     /note="putative methyllysine peptide binding site
                     [polypeptide binding]"
                     /db_xref="CDD:439103"
     Region          274..367
                     /region_name="MBT_SFMBT1_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Scm-like with four MBT domains protein 1 (SFMBT1);
                     cd20115"
                     /db_xref="CDD:439105"
     Region          383..472
                     /region_name="MBT_SFMBT1_rpt4"
                     /note="fourth malignant brain tumor (MBT) repeat found in
                     Scm-like with four MBT domains protein 1 (SFMBT1);
                     cd20117"
                     /db_xref="CDD:439107"
     Region          503..618
                     /region_name="SLED"
                     /note="SLED domain; pfam12140"
                     /db_xref="CDD:463469"
     Region          783..867
                     /region_name="SAM_Scm-like-4MBT1,2"
                     /note="SAM domain of Scm-like-4MBT1,2 proteins of Polycomb
                     group; cd09581"
                     /db_xref="CDD:188980"
     Site            order(822..824,826..827,830..831,834..835,840)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188980"
     Site            order(843..846,848..849,852,855)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188980"
     CDS             1..867
                     /gene="SFMBT1"
                     /coded_by="XM_041465041.1:219..2822"
                     /db_xref="GeneID:121352248"
ORIGIN      
        1 mngeqqydad agssveemef nwdeyledtg ataaphgsfk hvdtslqngf apgmklevav
       61 ksdqntywva tiittcgqll llrydgyged rkadfwcdil tadlhpigwc qqnkkilkvp
      121 egikdkipdq eeflqrvlkg acsapanlle glhrgknpld liapgsrlel qntrdsleaw
      181 ivtvvenvgg rlklryegle dldkfdqwlf yldpflhqvg waaqhgyslq pplairslrs
      241 eadwqeilkk vkeeeeessv ptdlfkdkpv igvhsfsegm kleavdpmap fvispatvlk
      301 vyndkyfmie iddlraerts sqryvchvns agifpvqwsl knglhlsppp gypgqdfdwa
      361 dylkqcgaea apqscfpllt sdhgfkenmk leavnpvdpe evciatvtkl kdsylwlqle
      421 gskkpvpeci vsvesmnifp vgwcetngyq lrpprkaivn kqkkiavvqp ekqilssrtv
      481 hdglknqeln ssdsvvingk yccpkiyfnh rcfsgpylnk griaelpqsv gpgncvlvlk
      541 evltllinaa ykpsrvlrel qldeeaawhg hgetlkakyk gksyratvev vrtadrvadf
      601 crktciklec cpnlfgpqmv ldkcsencsv ltktkythyy gkrknkrigr ppgghsnlev
      661 amkkpnkrrk rrkhffvhkk krsstsvdnt pagspqgsga eeeddqdevd eesltedsts
      721 ehqdellees evsekkslss sptqselshs laqdrdkrkr klrtfsfsdd enkppspkdi
      781 kmevaeklql dsnplewsva dvvrflkstd caplarifld qeidgqalll ltlptvqecm
      841 dlklgpaikl chhiervkla fyqqfan
//
LOCUS       XP_041320986             684 aa            linear   VRT 06-MAY-2021
DEFINITION  protein kinase C delta type [Pyrgilauda ruficollis].
ACCESSION   XP_041320986
VERSION     XP_041320986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="protein kinase C delta type"
                     /calculated_mol_wt=78373
     Region          150..210
                     /region_name="C1_nPKC_theta-like_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) theta,
                     delta, and similar proteins; cd20834"
                     /db_xref="CDD:410384"
     Site            order(162..168,176..180,183)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410384"
     Region          229..278
                     /region_name="C1_nPKC_theta-like_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in novel protein kinase C (nPKC) theta,
                     delta, and similar proteins; cd20837"
                     /db_xref="CDD:410387"
     Site            order(234..240,248..252,255)
                     /site_type="other"
                     /note="DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410387"
     Region          361..676
                     /region_name="STKc_nPKC_delta"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Novel Protein Kinase C delta; cd05620"
                     /db_xref="CDD:173710"
     Site            order(363..367,371,384,386,419,435..436,438,442,444,481,
                     483,485..486,488,498..499,502,516..521,548,554,557)
                     /site_type="active"
                     /db_xref="CDD:173710"
     Site            order(363..367,371,384,386,419,436..438,442,481,483,
                     485..486,488,498..499)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173710"
     Site            order(367,442,444,481,483,485,502,516..521,548,554,557)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173710"
     Site            498..521
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173710"
     Site            653
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:173710"
     Site            668..673
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:173710"
     CDS             1..684
                     /gene="PRKCD"
                     /coded_by="XM_041465052.1:156..2210"
                     /db_xref="GeneID:121352257"
ORIGIN      
        1 mapflrisfn sfelgpvqnq geqlqpfcai kmkealtter gktlvqkkpt mypewkstfd
       61 ahiyegrviq ivlmkaaeep lsevtvgvsv laerckkgng kaefwldlqp qgkvlmavqy
      121 fledadcrqs mreeegtvti nrrgaikqak ihyikshefi atffgqptfc svcrdfvwgl
      181 nkqgykcrqc naaihkkcid kiigrctgta ansrdtmfqk erfnidmphr frvynymspt
      241 fcdhcgsllw glvrqglkce ecgmnvhhkc qkkvanlcgi nqkllaealn qvsqkstrrs
      301 dsgsvesvgi yqdfdkkhka pggdttadns eydklwevnt tkpaprtarr kfnidsfvfh
      361 kvlgkgsfgk vllaelkgkn effaikalkk dvvlidddve ctmvekrvla lawenpflth
      421 lyctfqtkdh lffvmeflng gdlmfhiqdk grfdlyratf ygaeilcglq flhskgiiyr
      481 dlkldnvmvd keghikiadf gmckenivgd skastfcgtp dyiapeilqg lrytfsvdww
      541 sfgvllyeml igqspfhgdd edelfesirv dtphyprwit keskdilekl ferdpakrlg
      601 vtgnirdhpf fktinwtale krevdppfrp kvksasdynn fdreflsekp klsysdknli
      661 esmdqsafdg fsfinpkfeq ilnk
//
LOCUS       XP_041321001             619 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 12 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321001
VERSION     XP_041321001.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465067.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="kelch repeat and BTB domain-containing protein
                     12"
                     /calculated_mol_wt=70337
     Region          10..136
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          33..586
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          128..227
                     /region_name="BACK_KBTBD12"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 12
                     (KBTBD12); cd18485"
                     /db_xref="CDD:350560"
     Region          326..371
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          375..422
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          426..479
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..535
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          541..587
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..619
                     /gene="KBTBD12"
                     /coded_by="XM_041465067.1:137..1996"
                     /db_xref="GeneID:121352266"
ORIGIN      
        1 mdrkaeekrk qrhsltlleq vkrmkestqi tdvvlvaege kfpchrvvla afsayframf
       61 tcglaectqr evvlhdvsae svsvilhyvy saelrltsln vqtvalaayf mqmeevcnmc
      121 qkymmdhmda sncvgiyyfa nhigaddlcd qarkymyqhf aevslqeeil eiefqqlltl
      181 iksddlnisr eesildlvir wvkhsresrs ehlvellkqv rlvlvspsfl vearkrntii
      241 lcnsecndmf eealktiqls rhpslslryg mettdlllci gnnslgirsr hgsyadasfc
      301 yapatrktyf isspkygegl gcvctgvvte kndiivagea savkmsrert rnieiyryhq
      361 rgnhfwhslc ttqlrelyal gtahndlyii ggqmkvknqy lvtncvekys meqgtwrsta
      421 plpvplachv vvtvkdklyv lggwtpqmdl pdeepdrlsn rtfrydpgqd kwverapmkf
      481 skyrfstavv sgeiyvlggi gclgydrgqt rkcldaveiy npdgdfwrdg ppmpspllsl
      541 rtnstsagcv egklylcggf hgaarhevit keileldtwe nqwnvvatnv lmhdsydvcl
      601 varlnprdli ppppdlvnq
//
LOCUS       XP_041321013             311 aa            linear   VRT 06-MAY-2021
DEFINITION  monoglyceride lipase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321013
VERSION     XP_041321013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="monoglyceride lipase isoform X1"
                     /calculated_mol_wt=34259
     Region          30..302
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Site            128..132
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238382"
     CDS             1..311
                     /gene="MGLL"
                     /coded_by="XM_041465079.1:447..1382"
                     /db_xref="GeneID:121352270"
ORIGIN      
        1 mktghssrmp eesspkrspq nipykdlphi inadgqylfc rywkpeaspr alvfiahgag
       61 ehcgryddla qkltglnlfv fahdhvghgq segdrmvvsd fhvfirdslq hidlmkkehp
      121 klpvlilghs mggaisilta serpsefsgm llisplvvas pevatpikvf aakvlnfvlp
      181 nlslgsidps aisrnkkeme sytsdplvyh ggmkvsfviq lmnaiarier alpkltlpil
      241 vlhgssdklc dirgsyllmd tvqsqdktlk vyeeayhalh kelpevstsv fteiltwigq
      301 kvsaagetsh t
//
LOCUS       XP_041321020             303 aa            linear   VRT 06-MAY-2021
DEFINITION  monoglyceride lipase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321020
VERSION     XP_041321020.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465086.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="monoglyceride lipase isoform X2"
                     /calculated_mol_wt=33374
     Region          22..294
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     Site            120..124
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238382"
     CDS             1..303
                     /gene="MGLL"
                     /coded_by="XM_041465086.1:144..1055"
                     /db_xref="GeneID:121352270"
ORIGIN      
        1 mpeesspkrs pqnipykdlp hiinadgqyl fcrywkpeas pralvfiahg agehcgrydd
       61 laqkltglnl fvfahdhvgh gqsegdrmvv sdfhvfirds lqhidlmkke hpklpvlilg
      121 hsmggaisil taserpsefs gmllisplvv aspevatpik vfaakvlnfv lpnlslgsid
      181 psaisrnkke mesytsdplv yhggmkvsfv iqlmnaiari eralpkltlp ilvlhgssdk
      241 lcdirgsyll mdtvqsqdkt lkvyeeayha lhkelpevst svfteiltwi gqkvsaaget
      301 sht
//
LOCUS       XP_041321033             945 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 66 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321033
VERSION     XP_041321033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..945
                     /product="coiled-coil domain-containing protein 66 isoform
                     X1"
                     /calculated_mol_wt=106969
     Region          <125..558
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          421..572
                     /region_name="CCDC66"
                     /note="Coiled-coil domain-containing protein 66;
                     pfam15236"
                     /db_xref="CDD:434558"
     CDS             1..945
                     /gene="CCDC66"
                     /coded_by="XM_041465099.1:78..2915"
                     /db_xref="GeneID:121352283"
ORIGIN      
        1 mkmgnkarap kqalrikhtg lilrptqnac ikqenitkpr sesslsmtkg eklqvnkhss
       61 heattkgysl ifqrdktnrh pdsedpsivk ktkhkpqaph vsaedlkslv cltqaqlqqi
      121 lmivkegrsi setqnekqee matneasees viaslqkvce vspvpdeans dsgrkqepqp
      181 qpaqnvikds wkpadlfstl geregekall efkktqwkke ldeqvalkkk lketlegevg
      241 yfwaklgskk tpkvetpdpd qtvlpadavh gteensacta alateadgva lnvprapagq
      301 ssdfspsdfp agsctalpfr eavpqerpfs alkheqqkkw leeldkqkee aklrkleekl
      361 nsskaeehdr wemhfdsfkk hfntnaqhpl ngmhgkpesl slspdpkdqs afihplspaa
      421 lgnlmplqmg iaekatknga leqsqrvsfl rsmtalldpa qieerdrrrq kqlehqkaim
      481 aqveekrkqk qreeeqrkwe eqqeelrlar ekaqlqkqfe eemlkqkqke elatlkakel
      541 yqtmekaqel aqgskqdqhi pdlaqkahdi selqnslggg dreldncnsg isaqstafpa
      601 gvesppeqqa sprkdtavqt dcfntsaymg saeertvcce spdisieyke isnskkyqke
      661 mqymdknklp gkgtsgiysd lyeqyarker hikssekysk rpdwninkpg kryipasery
      721 peplqkqree nkvrrqmell qlvernspgq lsarrgghsa rslspreeta vkskghrgrk
      781 eekfhknhln eersesppvp avrngllqaq qrqmqashfp vysqlcgrek daragsqqrs
      841 spaavpaspp rarfvpyvrt revfclppea ppshphdsyq mpqqifssdh vrdpllnpda
      901 vtirerqqei lkglsklrqg llqkqkelen tliptvaqen fmppf
//
LOCUS       XP_041321044             924 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 66 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321044
VERSION     XP_041321044.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465110.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..924
                     /product="coiled-coil domain-containing protein 66 isoform
                     X2"
                     /calculated_mol_wt=104834
     Region          <125..716
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          421..572
                     /region_name="CCDC66"
                     /note="Coiled-coil domain-containing protein 66;
                     pfam15236"
                     /db_xref="CDD:434558"
     CDS             1..924
                     /gene="CCDC66"
                     /coded_by="XM_041465110.1:78..2852"
                     /db_xref="GeneID:121352283"
ORIGIN      
        1 mkmgnkarap kqalrikhtg lilrptqnac ikqenitkpr sesslsmtkg eklqvnkhss
       61 heattkgysl ifqrdktnrh pdsedpsivk ktkhkpqaph vsaedlkslv cltqaqlqqi
      121 lmivkegrsi setqnekqee matneasees viaslqkvce vspvpdeans dsgrkqepqp
      181 qpaqnvikds wkpadlfstl geregekall efkktqwkke ldeqvalkkk lketlegevg
      241 yfwaklgskk tpkvetpdpd qtvlpadavh gteensacta alateadgva lnvprapagq
      301 ssdfspsdfp agsctalpfr eavpqerpfs alkheqqkkw leeldkqkee aklrkleekl
      361 nsskaeehdr wemhfdsfkk hfntnaqhpl ngmhgkpesl slspdpkdqs afihplspaa
      421 lgnlmplqmg iaekatknga leqsqrvsfl rsmtalldpa qieerdrrrq kqlehqkaim
      481 aqveekrkqk qreeeqrkwe eqqeelrlar ekaqlqkqfe eemlkqkqke elatlkakel
      541 yqtmekaqel aqgskqdqhi pdlaqkahdi selqnslggg vesppeqqas prkdtavqtd
      601 cfntsaymgs aeertvcces pdisieykei snskkyqkem qymdknklpg kgtsgiysdl
      661 yeqyarkerh ikssekyskr pdwninkpgk ryipaseryp eplqkqreen kvrrqmellq
      721 lvernspgql sarrgghsar slspreetav kskghrgrke ekfhknhlne ersesppvpa
      781 vrngllqaqq rqmqashfpv ysqlcgrekd aragsqqrss paavpasppr arfvpyvrtr
      841 evfclppeap pshphdsyqm pqqifssdhv rdpllnpdav tirerqqeil kglsklrqgl
      901 lqkqkelent liptvaqenf mppf
//
LOCUS       XP_041321053             901 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 66 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321053
VERSION     XP_041321053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465119.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..901
                     /product="coiled-coil domain-containing protein 66 isoform
                     X3"
                     /calculated_mol_wt=101682
     Region          377..528
                     /region_name="CCDC66"
                     /note="Coiled-coil domain-containing protein 66;
                     pfam15236"
                     /db_xref="CDD:434558"
     Region          <422..749
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..901
                     /gene="CCDC66"
                     /coded_by="XM_041465119.1:78..2783"
                     /db_xref="GeneID:121352283"
ORIGIN      
        1 mkmgnkarap kqalrikhtg lilrptqnac ikqenitkpr sesslsmtkg eklqvnkhss
       61 heattkgysl ifqrdktnrh pdsedpsivk ktkhkpqaph vsaedlkslv cltqaqlqqi
      121 lmivkegrsi setqnekqee matneasees viaslqkvce vspvpdeans dsgrkqepqp
      181 qpaqnvikds wkpadlfstl geregekall efkktqwkke ldeqvalkkk lketlegevg
      241 yfwaklgskk tpkvetpdpd qtvlpadavh gteensacta alateadgva lnvprapagq
      301 ssdfspsdfp agsctalpfr aeehdrwemh fdsfkkhfnt naqhplngmh gkpeslslsp
      361 dpkdqsafih plspaalgnl mplqmgiaek atkngaleqs qrvsflrsmt alldpaqiee
      421 rdrrrqkqle hqkaimaqve ekrkqkqree eqrkweeqqe elrlarekaq lqkqfeeeml
      481 kqkqkeelat lkakelyqtm ekaqelaqgs kqdqhipdla qkahdiselq nslgggdrel
      541 dncnsgisaq stafpagves ppeqqasprk dtavqtdcfn tsaymgsaee rtvccespdi
      601 sieykeisns kkyqkemqym dknklpgkgt sgiysdlyeq yarkerhiks sekyskrpdw
      661 ninkpgkryi paserypepl qkqreenkvr rqmellqlve rnspgqlsar rgghsarsls
      721 preetavksk ghrgrkeekf hknhlneers esppvpavrn gllqaqqrqm qashfpvysq
      781 lcgrekdara gsqqrsspaa vpaspprarf vpyvrtrevf clppeappsh phdsyqmpqq
      841 ifssdhvrdp llnpdavtir erqqeilkgl sklrqgllqk qkelentlip tvaqenfmpp
      901 f
//
LOCUS       XP_041321060             781 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 66 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321060
VERSION     XP_041321060.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465126.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..781
                     /product="coiled-coil domain-containing protein 66 isoform
                     X4"
                     /calculated_mol_wt=88902
     Region          257..408
                     /region_name="CCDC66"
                     /note="Coiled-coil domain-containing protein 66;
                     pfam15236"
                     /db_xref="CDD:434558"
     CDS             1..781
                     /gene="CCDC66"
                     /coded_by="XM_041465126.1:206..2551"
                     /db_xref="GeneID:121352283"
ORIGIN      
        1 mkqtliqagn knhnhsqhrm lcrkdswkpa dlfstlgere gekallefkk tqwkkeldeq
       61 valkkklket legevgyfwa klgskktpkv etpdpdqtvl padavhgtee nsactaalat
      121 eadgvalnvp rapagqssdf spsdfpagsc talpfreavp qerpfsalkh eqqkkwleel
      181 dkqkeeaklr kleeklnssk aeehdrwemh fdsfkkhfnt naqhplngmh gkpeslslsp
      241 dpkdqsafih plspaalgnl mplqmgiaek atkngaleqs qrvsflrsmt alldpaqiee
      301 rdrrrqkqle hqkaimaqve ekrkqkqree eqrkweeqqe elrlarekaq lqkqfeeeml
      361 kqkqkeelat lkakelyqtm ekaqelaqgs kqdqhipdla qkahdiselq nslgggdrel
      421 dncnsgisaq stafpagves ppeqqasprk dtavqtdcfn tsaymgsaee rtvccespdi
      481 sieykeisns kkyqkemqym dknklpgkgt sgiysdlyeq yarkerhiks sekyskrpdw
      541 ninkpgkryi paserypepl qkqreenkvr rqmellqlve rnspgqlsar rgghsarsls
      601 preetavksk ghrgrkeekf hknhlneers esppvpavrn gllqaqqrqm qashfpvysq
      661 lcgrekdara gsqqrsspaa vpaspprarf vpyvrtrevf clppeappsh phdsyqmpqq
      721 ifssdhvrdp llnpdavtir erqqeilkgl sklrqgllqk qkelentlip tvaqenfmpp
      781 f
//
LOCUS       XP_041321069             745 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 66 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321069
VERSION     XP_041321069.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465135.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..745
                     /product="coiled-coil domain-containing protein 66 isoform
                     X5"
                     /calculated_mol_wt=84672
     Region          221..372
                     /region_name="CCDC66"
                     /note="Coiled-coil domain-containing protein 66;
                     pfam15236"
                     /db_xref="CDD:434558"
     CDS             1..745
                     /gene="CCDC66"
                     /coded_by="XM_041465135.1:206..2443"
                     /db_xref="GeneID:121352283"
ORIGIN      
        1 mkqtliqagn knhnhsqhrm lyeqvalkkk lketlegevg yfwaklgskk tpkvetpdpd
       61 qtvlpadavh gteensacta alateadgva lnvprapagq ssdfspsdfp agsctalpfr
      121 eavpqerpfs alkheqqkkw leeldkqkee aklrkleekl nsskaeehdr wemhfdsfkk
      181 hfntnaqhpl ngmhgkpesl slspdpkdqs afihplspaa lgnlmplqmg iaekatknga
      241 leqsqrvsfl rsmtalldpa qieerdrrrq kqlehqkaim aqveekrkqk qreeeqrkwe
      301 eqqeelrlar ekaqlqkqfe eemlkqkqke elatlkakel yqtmekaqel aqgskqdqhi
      361 pdlaqkahdi selqnslggg dreldncnsg isaqstafpa gvesppeqqa sprkdtavqt
      421 dcfntsaymg saeertvcce spdisieyke isnskkyqke mqymdknklp gkgtsgiysd
      481 lyeqyarker hikssekysk rpdwninkpg kryipasery peplqkqree nkvrrqmell
      541 qlvernspgq lsarrgghsa rslspreeta vkskghrgrk eekfhknhln eersesppvp
      601 avrngllqaq qrqmqashfp vysqlcgrek daragsqqrs spaavpaspp rarfvpyvrt
      661 revfclppea ppshphdsyq mpqqifssdh vrdpllnpda vtirerqqei lkglsklrqg
      721 llqkqkelen tliptvaqen fmppf
//
LOCUS       XP_041321080             505 aa            linear   VRT 06-MAY-2021
DEFINITION  THUMP domain-containing protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321080
VERSION     XP_041321080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..505
                     /product="THUMP domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=54955
     Region          <236..292
                     /region_name="THUMP"
                     /note="The THUMP domain is named after after thiouridine
                     synthases, methylases and PSUSs; smart00981"
                     /db_xref="CDD:214952"
     Region          302..487
                     /region_name="UPF0020"
                     /note="Putative RNA methylase family UPF0020; pfam01170"
                     /db_xref="CDD:395932"
     CDS             1..505
                     /gene="THUMPD3"
                     /coded_by="XM_041465146.1:80..1597"
                     /db_xref="GeneID:121352318"
ORIGIN      
        1 maeaeaagda gpgpgpaaaq egaelaavig atvptgfeqt aaeevreklg sasriskdrg
       61 kiyfevpars lpqvhrlrsv dnlfvvvqef kdyqfkenke dalkdledlv kklpwtdplk
      121 vwelnnslkk kktkrkkhnl qspasrgkls dggeeggadq nntndqedca qnpgaveptg
      181 gqdtenaqgv tsrngveeee dneqsdvkae aeassesgst agdgrtgege akvlrfrvtc
      241 nragdkhsft sneaardfgg avqehfqwka dmtnfdvevl lnihssevvv gialteeslh
      301 rrnithfgpt tlrstlaygm lrlcdpqptd iivdpmcgtg aipiegaaew pycyhiagdn
      361 npqavkraan nissllrkne skdsstalgv pldvvqwdic nlplrtgsvd ivvtdmpfgk
      421 rigskkknwd lypaclmemg rictpgtgra vlltqdkkcf akalsrvghi wrraqtvwvn
      481 vgglhaavyl lrrtseraqe arccw
//
LOCUS       XP_041321089             504 aa            linear   VRT 06-MAY-2021
DEFINITION  THUMP domain-containing protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321089
VERSION     XP_041321089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..504
                     /product="THUMP domain-containing protein 3 isoform X2"
                     /calculated_mol_wt=54868
     Region          <236..292
                     /region_name="THUMP"
                     /note="The THUMP domain is named after after thiouridine
                     synthases, methylases and PSUSs; smart00981"
                     /db_xref="CDD:214952"
     Region          302..486
                     /region_name="UPF0020"
                     /note="Putative RNA methylase family UPF0020; pfam01170"
                     /db_xref="CDD:395932"
     CDS             1..504
                     /gene="THUMPD3"
                     /coded_by="XM_041465155.1:80..1594"
                     /db_xref="GeneID:121352318"
ORIGIN      
        1 maeaeaagda gpgpgpaaaq egaelaavig atvptgfeqt aaeevreklg sasriskdrg
       61 kiyfevpars lpqvhrlrsv dnlfvvvqef kdyqfkenke dalkdledlv kklpwtdplk
      121 vwelnnslkk kktkrkkhnl qspasrgkls dggeeggadq nntndqedca qnpgaveptg
      181 gqdtenaqgv tsrngveeee dneqsdvkae aeassesgst agdgrtgege akvlrfrvtc
      241 nragdkhsft sneaardfgg avqehfqwka dmtnfdvevl lnihssevvv gialteeslh
      301 rrnithfgpt tlrstlaygm lrlcdpqptd iivdpmcgtg aipiegaaew pycyhiagdn
      361 npqavkraan nissllrkne skdstalgvp ldvvqwdicn lplrtgsvdi vvtdmpfgkr
      421 igskkknwdl ypaclmemgr ictpgtgrav lltqdkkcfa kalsrvghiw rraqtvwvnv
      481 gglhaavyll rrtseraqea rccw
//
LOCUS       XP_041321104            2201 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-B1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321104
VERSION     XP_041321104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2201
                     /product="plexin-B1"
                     /calculated_mol_wt=244930
     Region          27..489
                     /region_name="Sema_plexin_B1"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin B1; cd11275"
                     /db_xref="CDD:200536"
     Site            order(79..81,137,139..141,179,210,215,217..218,220..221,
                     243,250,370..371,376..377,384,389..391)
                     /site_type="other"
                     /note="Semaphorin binding site [polypeptide binding]"
                     /db_xref="CDD:200536"
     Region          491..540
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          549..636
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          650..>677
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          <689..1002
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          989..1088
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          1089..1134
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          1136..1227
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          1228..1315
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          1318..1440
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          1627..2163
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..2201
                     /gene="PLXNB1"
                     /coded_by="XM_041465170.1:280..6885"
                     /db_xref="GeneID:121352326"
ORIGIN      
        1 mplgtfllpv lcflgasipr glqyvtfshn atkflhlsmd lesgtiylga tnflfqlssd
       61 lllenmvqtg pvldskdclp pvsklecpqa hhtdnhnkll lvntvqkeli vcgsvhqgic
      121 ekrslesidh vlfrpespgd tqyvaandpn ittvgliays kdevpllfvg rgytsrgvgg
      181 gippittrnl rahggdvqat dshsifsyee taklavgrls eynhhfiksf tyhssvyflf
      241 yrrdlksqsr eyktyisric lddshyysyv elpllcqska ntysllqaay vtrpgkelaq
      301 gqldtegevl faafsawqas sgklseesal cvytmeevdr ltnwtrdvcy mrdgkseegt
      361 evayieydvs sncvqlpadt lyaypcgsdh tpspmasrvp leaapllekt earltavavn
      421 vedghtiafl gdsrgrlhkv ylgaqgeaht yasvsiqvns mvsgdllfdq lqehlfvmtq
      481 smvvkvpime cslyldcesc lalkdpycgw cvlqgrcsrr seclrsrlse qwlwsfnstq
      541 qclsvqsltp anisreekrn iflaisdlps lreeefyscy fedyespavl tesgimcpsp
      601 dpsqapalpa gtdhvtikli vrfhdifias vdfsfydcaa vallwksapc qkcvsslwgc
      661 nwciqqhlct hkatceegti iyneraqipt ssvypssaap ltkssttapt matkpvttpv
      721 hvgpstvpht epvhvtpsaa settpaqtpg ytrlplptea aslqaatesp lpppadkpvt
      781 vpettspaas vlsspsknmd hialptegpa taqearhtdp pttlggsplh tspvaavtps
      841 phvtsfkwpp spfpttealt saisspqtps qvpgspvvsd dapglpgtel pvsrlptsap
      901 pqwlleegte lqdtedwmdl lqaendtslf sastllsgdg dsserdvpdf prilhpdldy
      961 qydapefwee seepswgpna cpcvqgiqgs slfpvnvark itllgknfhl yqdqqwdyec
     1021 vlnlegrtvv meayvegeet nkslcyitcq mnqysytapq lefnavvfvq rrrhlrvdsa
     1081 adlhvtfync svghtdcsrc qtadskyncv wcggdnpsci frgsckeeie dlcpaplihs
     1141 vyplsgpveg gtrititgsn lgqkhqdiae tvtvagipca vdaqeyeiss sivcvtggsw
     1201 terfghivve vpgggrgvsg hvftyqnpel ksivptqgpk aggtcltllg sklltghpne
     1261 isvllgdlpc qilsemtedq lacqtspsnv stelpvtiky geqerrlegs lfrytldpni
     1321 tfaeppksfl sggrvlrvhg ynldvvqkpk irvtvspser rrrgvgrwrr iipdsecpeg
     1381 slcsiqqfee pclvnssyli lcktpainll lrsariklef ildnlsfdfn slhpmpfsye
     1441 vnpilkplna edpakpyrhk pgsvisvege nldlaiskde vmamigegvc vvktltrnhl
     1501 yceppseqpa prhrtkregt dllpeftvqm gnlnfllgrv qydtesqltf pleaqiglgv
     1561 gasfvalivl vivfiyrrks kqalrdykkv qiqlenlets vrdrckkeft dlmtemmdlt
     1621 sdlvgtgipf ldyksyaeri ffpghrespl qrdldipecr rqtveqglvq lsnllnsklf
     1681 ltkfihtlei qrtfsprdra yvaslltvsl hgkleyftdi lktllndlve qyvaknpklm
     1741 lrrtetvvek lltnwmsicl yafvrdsvge plymlfrgik hqvdkgpvdw vtgkakytln
     1801 dnrllredle yrtltlnalt qagvgaggae dsqgisakvl dcdtitqvke kildqiykgt
     1861 pychrpdpdt ldlewrsgla ghlilsdedv tsvvqgtwkr lntlqhykvp dgatvalvpr
     1921 ltkhihrenq dyipgektpm ledadeggik lwhlvkptee pelpkhrrgs lrdrerakai
     1981 peiyltrlls mkgtlqkfvd dlfqvilstn rpvplavkyf fdlldeqaih ygitdpetih
     2041 iwktnslplr fwiniiknpq fvfdvqtsdn vdavllviaq tfmdsctiad hklgrdspin
     2101 kllyardipr ykqmveryya dirqtisasd qemnsalael srnysgdlns lvalhelyky
     2161 inkyydqiit aleedptaqk mqlgyrlqqi aaavenkvtd l
//
LOCUS       XP_041321117             261 aa            linear   VRT 06-MAY-2021
DEFINITION  ER membrane protein complex subunit 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321117
VERSION     XP_041321117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="ER membrane protein complex subunit 3 isoform
                     X1"
                     /calculated_mol_wt=29938
     Region          5..190
                     /region_name="EMC3_TMCO1"
                     /note="Integral membrane protein EMC3/TMCO1-like;
                     pfam01956"
                     /db_xref="CDD:396507"
     CDS             1..261
                     /gene="EMC3"
                     /coded_by="XM_041465183.1:75..860"
                     /db_xref="GeneID:121352330"
ORIGIN      
        1 msepelllds nirlwvvlpi vfitffvgmi rhyvsillqs dkrltqeqvs dsqvlirsrv
       61 lrengkyipk qsflsrkyff nnpedgffkk tkrkvvppsp mtdptmltdm mkgnvtnvlp
      121 miliggwinm tfsgfvttkv pfpltlrfkp mlqqgiellt ldaswvssas wyflnvfglr
      181 siytlilgqd naadqsrvmq eqmtgaamam padtnkafkt ewealeltdh qwaledveee
      241 lmakdlhfeg mfkeelqtsi f
//
LOCUS       XP_041321127             216 aa            linear   VRT 06-MAY-2021
DEFINITION  ER membrane protein complex subunit 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321127
VERSION     XP_041321127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="ER membrane protein complex subunit 3 isoform
                     X2"
                     /calculated_mol_wt=24024
     Region          <61..145
                     /region_name="EMC3_TMCO1"
                     /note="Integral membrane protein EMC3/TMCO1-like;
                     pfam01956"
                     /db_xref="CDD:396507"
     CDS             1..216
                     /gene="EMC3"
                     /coded_by="XM_041465193.1:116..766"
                     /db_xref="GeneID:121352330"
ORIGIN      
        1 mggaahrlhh vlrghdpalr vhpaperqap hagagvrqps pdpeqspsgk wkihskadpt
       61 mltdmmkgnv tnvlpmilig gwinmtfsgf vttkvpfplt lrfkpmlqqg ielltldasw
      121 vssaswyfln vfglrsiytl ilgqdnaadq srvmqeqmtg aamampadtn kafkteweal
      181 eltdhqwale dveeelmakd lhfegmfkee lqtsif
//
LOCUS       XP_041321141             712 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 174 [Pyrgilauda ruficollis].
ACCESSION   XP_041321141
VERSION     XP_041321141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..712
                     /product="coiled-coil domain-containing protein 174"
                     /calculated_mol_wt=79131
     Region          <19..387
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          213..301
                     /region_name="DUF4078"
                     /note="Domain of unknown function (DUF4078); pfam13300"
                     /db_xref="CDD:463837"
     Region          <427..692
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..712
                     /gene="CCDC174"
                     /coded_by="XM_041465207.1:39..2177"
                     /db_xref="GeneID:121352341"
ORIGIN      
        1 mdrrkkpldv aasslvdlka elfrkqeefk kekllkdagv fakprtsnkk psiwtkqntg
       61 vvnraakdve qkaeeqdild qsrkkleeka klyekmtkgd fpdeetedly lvdftqkiid
      121 kqhevqelqq seaagktser dtdeeetqpe adipppedpd eewvdyvdfl grsrrcmkkd
      181 lpsllkmdqe lqgkrpepdg ntllsedmrr elqrqqweke eeealrkpmg pihyediren
      241 earqlgvgyf afsrdqelrh kqratldmlr eqtldqrnkr eqlkekrkaa ldarlsklra
      301 rkikklreag leeeaeklen gemkgaaeep eppkvtaasr kveviiqerr dtkpgvpyvr
      361 ewdkgkelmf gqwekkqeel rderdpefap psdyflgqkk ddyhrsrnln ssetssekle
      421 teraqnqqrp svpggsgsst gdvplspqps ntnvplkpgs aepsggdtqg vssaeddssd
      481 dedmlppaqa ygfgaravpp plrgygysar gvpppmpayg ygtpkvpfpv qaygygapgm
      541 vppmhsygyg tpempfamqa ygygtqgvpp gmqtcgcssq dvppgmqtcg cssqdvppgm
      601 qtcscsaqdv ppgtqvcdls sqdvppgmht cgcssqdvpp gthacgcstq emppgtdtcg
      661 sstqdvppgt qasgcstqdm appvqtsssd tpnqeplyqs lddmlsyyrq vt
//
LOCUS       XP_041321158            1229 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-dependent secretion activator 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321158
VERSION     XP_041321158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465224.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1229
                     /product="calcium-dependent secretion activator 1 isoform
                     X1"
                     /calculated_mol_wt=140389
     Region          391..510
                     /region_name="PH_CADPS"
                     /note="Ca2+-dependent activator protein (also called CAPS)
                     Pleckstrin homology (PH) domain; cd01234"
                     /db_xref="CDD:269940"
     Region          712..1176
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     CDS             1..1229
                     /gene="CADPS"
                     /coded_by="XM_041465224.1:16..3705"
                     /db_xref="GeneID:121352355"
ORIGIN      
        1 mrciaypfna kqptdmarrq qkiskqqlqt ikdrfqafln getqivadea finavqsyye
       61 vflksdrvar mvqsggcsan dsrevfkkhi ekrvrslpei dglsketvls swmakfdaiy
      121 rgeedprkqq armtasaase lilskeqlye mfqnilgikk fehqllynac qldnpdeqaa
      181 qirreldgrl qmaeqiaker kfpkfvskem enmyieelks svnllmanle smpvskggse
      241 fklqklkrsh ntsiidmgee nenqlsksdv vlsfslevvi mevqglksla pnrivyctme
      301 veggeklqtd qaeaskptwg tqgdftttha lpavkvklft estgvlaled kelgrvvlhp
      361 tpnspkqsew hkmtvskncp dqdlkiklav rmdkpqnmkh sgylwaigkn vwkrwkkrff
      421 vlvqvsqytf amcsyrekka epqellqldg ytvdytdpqp gldggrtffn avkegdtvif
      481 asddeqdril wvqamyratg qshkpvpptq vqklnakggn vpqidapisq fyadraqkhg
      541 mdefissnpc nfdhaslfem vqrltldhrl ndsysclgwf spgqvfvlde ycarngvrgc
      601 hrhlcylrdl leraengami dptllhysfa fcashvhgnr pdgigtvtvd ekerfeeike
      661 rlrvllenqi thfrycfpfg rpegalkatl sllervlmkd ivtpvpqeev ktvirkcleq
      721 aalvnytrls eyakieenqk daenvgrlvt pakkledtir laelvievlq qneehhaevs
      781 svpgeafaww sdlmvehaet flslfavdmd aalevqppdt wdsfplfqli ndslrsdynl
      841 cngkfhkhlq dlfaplvvry vdlmessiaq sihrgferes wepvksltsn lpnvnlpnvn
      901 lpkvpnlpvn iplgipqmps fsapswmaai ydsdngsgts edmfwkldal qtfirdlhwp
      961 eeefgkhleq rlklmasdmi escvkrtria fevklqktsr stdfrvpqsi ctmfnvmvda
     1021 kaqstklcsm emgqehqyhs kidelieetv kemitllvak fvtilegvla klsrydegtl
     1081 fssflsftvk aaskyvdvpk pgmdvadayv tfvrhsqdvl rdkvneemyi erlfdqwyts
     1141 smsvvctwlt drmdlqlhiy qlktlirivk ktyrdfrlqg vldstlnskt yetirnrltv
     1201 eeatasvseg gglqgitmkd sdeedeedd
//
LOCUS       XP_041321166            1190 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-dependent secretion activator 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321166
VERSION     XP_041321166.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465232.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1190
                     /product="calcium-dependent secretion activator 1 isoform
                     X2"
                     /calculated_mol_wt=136483
     Region          391..510
                     /region_name="PH_CADPS"
                     /note="Ca2+-dependent activator protein (also called CAPS)
                     Pleckstrin homology (PH) domain; cd01234"
                     /db_xref="CDD:269940"
     Region          712..1137
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     CDS             1..1190
                     /gene="CADPS"
                     /coded_by="XM_041465232.1:16..3588"
                     /db_xref="GeneID:121352355"
ORIGIN      
        1 mrciaypfna kqptdmarrq qkiskqqlqt ikdrfqafln getqivadea finavqsyye
       61 vflksdrvar mvqsggcsan dsrevfkkhi ekrvrslpei dglsketvls swmakfdaiy
      121 rgeedprkqq armtasaase lilskeqlye mfqnilgikk fehqllynac qldnpdeqaa
      181 qirreldgrl qmaeqiaker kfpkfvskem enmyieelks svnllmanle smpvskggse
      241 fklqklkrsh ntsiidmgee nenqlsksdv vlsfslevvi mevqglksla pnrivyctme
      301 veggeklqtd qaeaskptwg tqgdftttha lpavkvklft estgvlaled kelgrvvlhp
      361 tpnspkqsew hkmtvskncp dqdlkiklav rmdkpqnmkh sgylwaigkn vwkrwkkrff
      421 vlvqvsqytf amcsyrekka epqellqldg ytvdytdpqp gldggrtffn avkegdtvif
      481 asddeqdril wvqamyratg qshkpvpptq vqklnakggn vpqidapisq fyadraqkhg
      541 mdefissnpc nfdhaslfem vqrltldhrl ndsysclgwf spgqvfvlde ycarngvrgc
      601 hrhlcylrdl leraengami dptllhysfa fcashvhgnr pdgigtvtvd ekerfeeike
      661 rlrvllenqi thfrycfpfg rpegalkatl sllervlmkd ivtpvpqeev ktvirkcleq
      721 aalvnytrls eyakiegkkr emyehpvfcl asqvmdltiq nvgrlvtpak kledtirlae
      781 lvievlqqne ehhaeafaww sdlmvehaet flslfavdmd aalevqppdt wdsfplfqli
      841 ndslrsdynl cngkfhkhlq dlfaplvvry vdlmessiaq sihrgferes wepvnngsgt
      901 sedmfwklda lqtfirdlhw peeefgkhle qrlklmasdm iescvkrtri afevklqkts
      961 rstdfrvpqs ictmfnvmvd akaqstklcs memgqehqyh skidelieet vkemitllva
     1021 kfvtilegvl aklsrydegt lfssflsftv kaaskyvdvp kpgmdvaday vtfvrhsqdv
     1081 lrdkvneemy ierlfdqwyt ssmsvvctwl tdrmdlqlhi yqlktliriv kktyrdfrlq
     1141 gvldstlnsk tyetirnrlt veeatasvse ggglqgitmk dsdeedeedd
//
LOCUS       XP_041321175            1222 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-dependent secretion activator 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321175
VERSION     XP_041321175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465241.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1222
                     /product="calcium-dependent secretion activator 1 isoform
                     X3"
                     /calculated_mol_wt=139605
     Region          391..510
                     /region_name="PH_CADPS"
                     /note="Ca2+-dependent activator protein (also called CAPS)
                     Pleckstrin homology (PH) domain; cd01234"
                     /db_xref="CDD:269940"
     Region          712..1169
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     CDS             1..1222
                     /gene="CADPS"
                     /coded_by="XM_041465241.1:16..3684"
                     /db_xref="GeneID:121352355"
ORIGIN      
        1 mrciaypfna kqptdmarrq qkiskqqlqt ikdrfqafln getqivadea finavqsyye
       61 vflksdrvar mvqsggcsan dsrevfkkhi ekrvrslpei dglsketvls swmakfdaiy
      121 rgeedprkqq armtasaase lilskeqlye mfqnilgikk fehqllynac qldnpdeqaa
      181 qirreldgrl qmaeqiaker kfpkfvskem enmyieelks svnllmanle smpvskggse
      241 fklqklkrsh ntsiidmgee nenqlsksdv vlsfslevvi mevqglksla pnrivyctme
      301 veggeklqtd qaeaskptwg tqgdftttha lpavkvklft estgvlaled kelgrvvlhp
      361 tpnspkqsew hkmtvskncp dqdlkiklav rmdkpqnmkh sgylwaigkn vwkrwkkrff
      421 vlvqvsqytf amcsyrekka epqellqldg ytvdytdpqp gldggrtffn avkegdtvif
      481 asddeqdril wvqamyratg qshkpvpptq vqklnakggn vpqidapisq fyadraqkhg
      541 mdefissnpc nfdhaslfem vqrltldhrl ndsysclgwf spgqvfvlde ycarngvrgc
      601 hrhlcylrdl leraengami dptllhysfa fcashvhgnr pdgigtvtvd ekerfeeike
      661 rlrvllenqi thfrycfpfg rpegalkatl sllervlmkd ivtpvpqeev ktvirkcleq
      721 aalvnytrls eyakiegpvs cttenvgrlv tpakkledti rlaelvievl qqneehhaeg
      781 keafawwsdl mvehaetfls lfavdmdaal evqppdtwds fplfqlinds lrsdynlcng
      841 kfhkhlqdlf aplvvryvdl messiaqsih rgfereswep vnnlpnvnlp nvnlpkvpnl
      901 pvniplgipq mpsfsapswm aaiydsdngs gtsedmfwkl dalqtfirdl hwpeeefgkh
      961 leqrlklmas dmiescvkrt riafevklqk tsrstdfrvp qsictmfnvm vdakaqstkl
     1021 csmemgqehq yhskidelie etvkemitll vakfvtileg vlaklsryde gtlfssflsf
     1081 tvkaaskyvd vpkpgmdvad ayvtfvrhsq dvlrdkvnee myierlfdqw ytssmsvvct
     1141 wltdrmdlql hiyqlktlir ivkktyrdfr lqgvldstln sktyetirnr ltveeatasv
     1201 seggglqgit mkdsdeedee dd
//
LOCUS       XP_041321185            1167 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-dependent secretion activator 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321185
VERSION     XP_041321185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1167
                     /product="calcium-dependent secretion activator 1 isoform
                     X4"
                     /calculated_mol_wt=133806
     Region          391..510
                     /region_name="PH_CADPS"
                     /note="Ca2+-dependent activator protein (also called CAPS)
                     Pleckstrin homology (PH) domain; cd01234"
                     /db_xref="CDD:269940"
     Region          712..1114
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     CDS             1..1167
                     /gene="CADPS"
                     /coded_by="XM_041465251.1:16..3519"
                     /db_xref="GeneID:121352355"
ORIGIN      
        1 mrciaypfna kqptdmarrq qkiskqqlqt ikdrfqafln getqivadea finavqsyye
       61 vflksdrvar mvqsggcsan dsrevfkkhi ekrvrslpei dglsketvls swmakfdaiy
      121 rgeedprkqq armtasaase lilskeqlye mfqnilgikk fehqllynac qldnpdeqaa
      181 qirreldgrl qmaeqiaker kfpkfvskem enmyieelks svnllmanle smpvskggse
      241 fklqklkrsh ntsiidmgee nenqlsksdv vlsfslevvi mevqglksla pnrivyctme
      301 veggeklqtd qaeaskptwg tqgdftttha lpavkvklft estgvlaled kelgrvvlhp
      361 tpnspkqsew hkmtvskncp dqdlkiklav rmdkpqnmkh sgylwaigkn vwkrwkkrff
      421 vlvqvsqytf amcsyrekka epqellqldg ytvdytdpqp gldggrtffn avkegdtvif
      481 asddeqdril wvqamyratg qshkpvpptq vqklnakggn vpqidapisq fyadraqkhg
      541 mdefissnpc nfdhaslfem vqrltldhrl ndsysclgwf spgqvfvlde ycarngvrgc
      601 hrhlcylrdl leraengami dptllhysfa fcashvhgnr pdgigtvtvd ekerfeeike
      661 rlrvllenqi thfrycfpfg rpegalkatl sllervlmkd ivtpvpqeev ktvirkcleq
      721 aalvnytrls eyakieenvg rlvtpakkle dtirlaelvi evlqqneehh aeafawwsdl
      781 mvehaetfls lfavdmdaal evqppdtwds fplfqlinds lrsdynlcng kfhkhlqdlf
      841 aplvvryvdl messiaqsih rgfereswep vnngsgtsed mfwkldalqt firdlhwpee
      901 efgkhleqrl klmasdmies cvkrtriafe vklqktsrst dfrvpqsict mfnvmvdaka
      961 qstklcsmem gqehqyhski delieetvke mitllvakfv tilegvlakl srydegtlfs
     1021 sflsftvkaa skyvdvpkpg mdvadayvtf vrhsqdvlrd kvneemyier lfdqwytssm
     1081 svvctwltdr mdlqlhiyql ktlirivkkt yrdfrlqgvl dstlnsktye tirnrltvee
     1141 atasvseggg lqgitmkdsd eedeedd
//
LOCUS       XP_041321194            1174 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-dependent secretion activator 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321194
VERSION     XP_041321194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1174
                     /product="calcium-dependent secretion activator 1 isoform
                     X5"
                     /calculated_mol_wt=134452
     Region          391..510
                     /region_name="PH_CADPS"
                     /note="Ca2+-dependent activator protein (also called CAPS)
                     Pleckstrin homology (PH) domain; cd01234"
                     /db_xref="CDD:269940"
     Region          712..1121
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     CDS             1..1174
                     /gene="CADPS"
                     /coded_by="XM_041465260.1:16..3540"
                     /db_xref="GeneID:121352355"
ORIGIN      
        1 mrciaypfna kqptdmarrq qkiskqqlqt ikdrfqafln getqivadea finavqsyye
       61 vflksdrvar mvqsggcsan dsrevfkkhi ekrvrslpei dglsketvls swmakfdaiy
      121 rgeedprkqq armtasaase lilskeqlye mfqnilgikk fehqllynac qldnpdeqaa
      181 qirreldgrl qmaeqiaker kfpkfvskem enmyieelks svnllmanle smpvskggse
      241 fklqklkrsh ntsiidmgee nenqlsksdv vlsfslevvi mevqglksla pnrivyctme
      301 veggeklqtd qaeaskptwg tqgdftttha lpavkvklft estgvlaled kelgrvvlhp
      361 tpnspkqsew hkmtvskncp dqdlkiklav rmdkpqnmkh sgylwaigkn vwkrwkkrff
      421 vlvqvsqytf amcsyrekka epqellqldg ytvdytdpqp gldggrtffn avkegdtvif
      481 asddeqdril wvqamyratg qshkpvpptq vqklnakggn vpqidapisq fyadraqkhg
      541 mdefissnpc nfdhaslfem vqrltldhrl ndsysclgwf spgqvfvlde ycarngvrgc
      601 hrhlcylrdl leraengami dptllhysfa fcashvhgnr pdgigtvtvd ekerfeeike
      661 rlrvllenqi thfrycfpfg rpegalkatl sllervlmkd ivtpvpqeev ktvirkcleq
      721 aalvnytrls eyakiegpvs cttenvgrlv tpakkledti rlaelvievl qqneehhaea
      781 fawwsdlmve haetflslfa vdmdaalevq ppdtwdsfpl fqlindslrs dynlcngkfh
      841 khlqdlfapl vvryvdlmes siaqsihrgf ereswepvnn gsgtsedmfw kldalqtfir
      901 dlhwpeeefg khleqrlklm asdmiescvk rtriafevkl qktsrstdfr vpqsictmfn
      961 vmvdakaqst klcsmemgqe hqyhskidel ieetvkemit llvakfvtil egvlaklsry
     1021 degtlfssfl sftvkaasky vdvpkpgmdv adayvtfvrh sqdvlrdkvn eemyierlfd
     1081 qwytssmsvv ctwltdrmdl qlhiyqlktl irivkktyrd frlqgvldst lnsktyetir
     1141 nrltveeata svseggglqg itmkdsdeed eedd
//
LOCUS       XP_041321203            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-dependent secretion activator 1 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321203
VERSION     XP_041321203.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465269.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="calcium-dependent secretion activator 1 isoform
                     X6"
                     /calculated_mol_wt=131791
     Region          391..510
                     /region_name="PH_CADPS"
                     /note="Ca2+-dependent activator protein (also called CAPS)
                     Pleckstrin homology (PH) domain; cd01234"
                     /db_xref="CDD:269940"
     Region          695..1097
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     CDS             1..1150
                     /gene="CADPS"
                     /coded_by="XM_041465269.1:16..3468"
                     /db_xref="GeneID:121352355"
ORIGIN      
        1 mrciaypfna kqptdmarrq qkiskqqlqt ikdrfqafln getqivadea finavqsyye
       61 vflksdrvar mvqsggcsan dsrevfkkhi ekrvrslpei dglsketvls swmakfdaiy
      121 rgeedprkqq armtasaase lilskeqlye mfqnilgikk fehqllynac qldnpdeqaa
      181 qirreldgrl qmaeqiaker kfpkfvskem enmyieelks svnllmanle smpvskggse
      241 fklqklkrsh ntsiidmgee nenqlsksdv vlsfslevvi mevqglksla pnrivyctme
      301 veggeklqtd qaeaskptwg tqgdftttha lpavkvklft estgvlaled kelgrvvlhp
      361 tpnspkqsew hkmtvskncp dqdlkiklav rmdkpqnmkh sgylwaigkn vwkrwkkrff
      421 vlvqvsqytf amcsyrekka epqellqldg ytvdytdpqp gldggrtffn avkegdtvif
      481 asddeqdril wvqamyratg qshkpvpptq vqklnakggn vpqidapisq fyadraqkhg
      541 mdefissnpc nfdhaslfem gwfspgqvfv ldeycarngv rgchrhlcyl rdlleraeng
      601 amidptllhy sfafcashvh gnrpdgigtv tvdekerfee ikerlrvlle nqithfrycf
      661 pfgrpegalk atlsllervl mkdivtpvpq eevktvirkc leqaalvnyt rlseyakiee
      721 nvgrlvtpak kledtirlae lvievlqqne ehhaeafaww sdlmvehaet flslfavdmd
      781 aalevqppdt wdsfplfqli ndslrsdynl cngkfhkhlq dlfaplvvry vdlmessiaq
      841 sihrgferes wepvnngsgt sedmfwklda lqtfirdlhw peeefgkhle qrlklmasdm
      901 iescvkrtri afevklqkts rstdfrvpqs ictmfnvmvd akaqstklcs memgqehqyh
      961 skidelieet vkemitllva kfvtilegvl aklsrydegt lfssflsftv kaaskyvdvp
     1021 kpgmdvaday vtfvrhsqdv lrdkvneemy ierlfdqwyt ssmsvvctwl tdrmdlqlhi
     1081 yqlktliriv kktyrdfrlq gvldstlnsk tyetirnrlt veeatasvse ggglqgitmk
     1141 dsdeedeedd
//
LOCUS       XP_041321216             160 aa            linear   VRT 06-MAY-2021
DEFINITION  von Hippel-Lindau disease tumor suppressor [Pyrgilauda ruficollis].
ACCESSION   XP_041321216
VERSION     XP_041321216.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465282.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..160
                     /product="von Hippel-Lindau disease tumor suppressor"
                     /calculated_mol_wt=18145
     Region          16..97
                     /region_name="pVHL"
                     /note="von Hippel-Landau (pVHL) tumor suppressor protein;
                     cl03381"
                     /db_xref="CDD:470794"
     Site            order(20,22,28,30..32,41,44,51..52,58..65,68,70)
                     /site_type="other"
                     /note="pVHL-HIF-1alpha interaction [polypeptide binding]"
                     /db_xref="CDD:176472"
     Site            order(32,102,108,110..112,114..115,123,126..127,133)
                     /site_type="other"
                     /note="pVHL-ElonginB-ElonginC (VBC) interface [polypeptide
                     binding]"
                     /db_xref="CDD:176472"
     Region          105..153
                     /region_name="VHL_C"
                     /note="VHL box domain; pfam17211"
                     /db_xref="CDD:407332"
     CDS             1..160
                     /gene="VHL"
                     /coded_by="XM_041465282.1:11..493"
                     /db_xref="GeneID:121352382"
ORIGIN      
        1 msppgpgrpa gagavlrsvn trelsevvfn nhsprcvlpv wldfegrprc ypvlqprsgr
       61 vmrsyrghlw lfrdagtndg llvnqqelfv aapdvtkadi tlpvftlker clqvvrslvs
      121 pvdyrkldiv qslyeeledh pdiwkdlrrl slernealrn
//
LOCUS       XP_041321227             334 aa            linear   VRT 06-MAY-2021
DEFINITION  glucoside xylosyltransferase 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321227
VERSION     XP_041321227.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465293.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="glucoside xylosyltransferase 2 isoform X1"
                     /calculated_mol_wt=39259
     Region          1..304
                     /region_name="GT8_like_2"
                     /note="GT8_like_2 represents a subfamily of GT8 with
                     unknown function; cd06430"
                     /db_xref="CDD:133052"
     Site            order(6..8,10..11,87,102,104..106,134,158..160,204..205,
                     230..231,251,253..254,257)
                     /site_type="active"
                     /note="putative ligand binding site [active]"
                     /db_xref="CDD:133052"
     Site            order(104,106,251)
                     /site_type="active"
                     /note="metal binding site [active]"
                     /db_xref="CDD:133052"
     CDS             1..334
                     /gene="GXYLT2"
                     /coded_by="XM_041465293.1:113..1117"
                     /db_xref="GeneID:121352391"
ORIGIN      
        1 mhlavvacgd rleetlimlk savlfssrrl cfhifaedsl kpefetklke wpssyrkkfe
       61 sniypitfsv gnaqewkklf kpcaaqrlfl pvilkdvdsl lyvdtdvlfl rpiddiwhll
      121 refnstqlaa mapeheipki gwysrfarhp fygstglnsg vmlmnltrir stqfknslip
      181 ggltweemly plyqkyknyi twgdqdllni ifyfnpecly vfpcqwnyrp dhcmygsncr
      241 gaeeegvsil hgnrgvyhdd kqptfralye virdfpfedn lfqslyyplq srfldtvhtl
      301 cgripqvflk qiektmkkvy enrvivylga nhry
//
LOCUS       XP_041321235             413 aa            linear   VRT 06-MAY-2021
DEFINITION  glucoside xylosyltransferase 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321235
VERSION     XP_041321235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="glucoside xylosyltransferase 2 isoform X2"
                     /calculated_mol_wt=47414
     Region          80..383
                     /region_name="GT8_like_2"
                     /note="GT8_like_2 represents a subfamily of GT8 with
                     unknown function; cd06430"
                     /db_xref="CDD:133052"
     Site            order(85..87,89..90,166,181,183..185,213,237..239,
                     283..284,309..310,330,332..333,336)
                     /site_type="active"
                     /note="putative ligand binding site [active]"
                     /db_xref="CDD:133052"
     Site            order(183,185,330)
                     /site_type="active"
                     /note="metal binding site [active]"
                     /db_xref="CDD:133052"
     CDS             1..413
                     /gene="GXYLT2"
                     /coded_by="XM_041465301.1:130..1371"
                     /db_xref="GeneID:121352391"
ORIGIN      
        1 mrrpckvaaa llclavllll yllagsaapp papsapgplp sgipgrcdpp aprvpsavsl
       61 wcrkpgeqkh pkepsslqcm hlavvacgdr leetlimlks avlfssrrlc fhifaedslk
      121 pefetklkew pssyrkkfes niypitfsvg naqewkklfk pcaaqrlflp vilkdvdsll
      181 yvdtdvlflr piddiwhllr efnstqlaam apeheipkig wysrfarhpf ygstglnsgv
      241 mlmnltrirs tqfknslipg gltweemlyp lyqkyknyit wgdqdllnii fyfnpeclyv
      301 fpcqwnyrpd hcmygsncrg aeeegvsilh gnrgvyhddk qptfralyev irdfpfednl
      361 fqslyyplqs rfldtvhtlc gripqvflkq iektmkkvye nrvivylgan hry
//
LOCUS       XP_041321246             580 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein-like 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321246
VERSION     XP_041321246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..580
                     /product="guanine nucleotide-binding protein-like 3"
                     /calculated_mol_wt=65452
     Region          15..89
                     /region_name="GN3L_Grn1"
                     /note="GNL3L/Grn1 putative GTPase; pfam08701"
                     /db_xref="CDD:462569"
     Region          142..310
                     /region_name="Nucleostemin_like"
                     /note="A circularly permuted subfamily of the Ras GTPases;
                     cd04178"
                     /db_xref="CDD:206753"
     Site            order(179..180,182..183,208..210,264..270,309)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206753"
     Site            179..182
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206753"
     Site            208..210
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206753"
     Site            262..269
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206753"
     Site            287..294
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206753"
     Site            290
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206753"
     Site            306..309
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206753"
     Site            308..310
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206753"
     CDS             1..580
                     /gene="GNL3"
                     /coded_by="XM_041465312.1:98..1840"
                     /db_xref="GeneID:121352407"
ORIGIN      
        1 mkrpklrkas krlschkryk iqkkirehhr kvrkeakkrg hkkpkkdpgi psaapfkeel
       61 lreaeqrkqr leelkqkqkl nrqkehekkr kleakknaaa ikeqaegkes sgkskgktkk
      121 plnknskksf crelmkvlea sdvvlevlda rdpmgcrcpq leqavtssgg nkklllvlnk
      181 idlvpkdnve kwlnylkkef ptvafksatm mkdktmqeqv tkrharvdfs etsqyfgskc
      241 llkllqgygr tqdkaiqvgv vgfpnvgkss iinslkgkra cnvglargvt ksmqtvhldk
      301 qtkildspsi iadpsnsala lalrsvidpe gsdsadvleg vnaiinhcsk qqvmmhynip
      361 dfrdpeefls llaqkrgmlk kggvpdienm aklvlcdwtg arikyysqpp gfqklppylt
      421 eqkiaemqeg fnlnnldqen sntvqalkhp spassiafqs agmtsgiiee hkvieeeskw
      481 anmetskeee qeeeeeeeee eegktesddg eddmeedddd diieesqvql trkaepgkrq
      541 tnprnskgqg agnersrsls fsldkpaded daydfntdyv
//
LOCUS       XP_041321262            1005 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-like modifier-activating enzyme 7 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321262
VERSION     XP_041321262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465328.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1005
                     /product="ubiquitin-like modifier-activating enzyme 7
                     isoform X1"
                     /calculated_mol_wt=110768
     Region          6..1002
                     /region_name="Ube1"
                     /note="ubiquitin-activating enzyme E1; TIGR01408"
                     /db_xref="CDD:273603"
     CDS             1..1005
                     /gene="UBA7"
                     /coded_by="XM_041465328.1:2..3019"
                     /db_xref="GeneID:121352411"
ORIGIN      
        1 megseeepry srqlyvlggg arrlpgsavl vsglrgtgaq vatalvlagt grvvlhdcga
       61 actadrthqf lleesdlgqn rakasqrala elnphvvvea htgelseafl asfqvvvlte
      121 spleeqlrvg dfchaqgicf ivadtkglag qlfcdfgerf vvhdptegdp vsaavehisq
      181 gnpgvvtymg tenshghlfc dgdlvtfsgv qgmtelncqe pvpvhvldaf rleisdtssf
      241 spyrcgglis qvqqpqecsh kplrqsleep kiqvanpedl prscslhaaf qalhafrreq
      301 grlprprapa daervlelar slgaqqgpld edivrafasv sagdlcpvaa vvgalaaqev
      361 lkaitgrflp ldqwlyfdal eclalagaaq ltetdcaprg srydgqiavf ganfqenlgh
      421 qkylvvgaga igcellknfa mmglaagpdg elivtdmdtv alsnlhrqll yrsadisepk
      481 svvaaaavqr mnpdvrvtah qnqvgpatem lykdnffrhl dgvasaldti eartylerrc
      541 lrcrtpllds gtegtrgnvl amvpsltepl rpastprdgt fpmctlrhfp rtiqhtlqwa
      601 rdefeglfql paeqvnqfme dpafleqqpp gkvleqvwer lrerpqdwrd cvrwarrrwq
      661 scyhdaiaql lhtyppehet spgvpfwagd rscphpltfn adndthldyv laaahlfaqv
      721 hrvppcrdra aiqailrdvv lppfapqegl qiplteepte eaqvptdhrq lteltqdvvq
      781 wrqelvgded tqaplmvpih fekdndvhid fitaasnlra enygispanw ltskriagri
      841 vpaiitttaa vaglaclevy klvwgcqdls cyrnsnisls aclllrvqpp paptyryggr
      901 ewscwdrlem ravgadgqvm tvqevlqwlq rthgwtvtml lcgdsvlyds kadaetrarq
      961 qaqrlsesle darmlqqqdl ellyiceged aeaedtrppl lcslp
//
LOCUS       XP_041321272             971 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-like modifier-activating enzyme 7 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321272
VERSION     XP_041321272.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465338.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..971
                     /product="ubiquitin-like modifier-activating enzyme 7
                     isoform X2"
                     /calculated_mol_wt=106787
     Region          6..968
                     /region_name="Ube1"
                     /note="ubiquitin-activating enzyme E1; TIGR01408"
                     /db_xref="CDD:273603"
     CDS             1..971
                     /gene="UBA7"
                     /coded_by="XM_041465338.1:2..2917"
                     /db_xref="GeneID:121352411"
ORIGIN      
        1 megseeepry srqlyvlggg arrlpgsavl vsglrgtgaq vatalvlagt grvvlhdcga
       61 actadrthqf lleesdlgqn rakasqrala elnphvvvea htgelseafl asfqvvvlte
      121 spleeqlrvg dfchaqgicf ivadtkglag qlfcdfgerf vvhdptegdp vsaavehisq
      181 gnpgvvtymg tenshghlfc dgdlvtfsgv qgmtelncqe pvpvhvldaf rleisdtssf
      241 spyrcgglis qvqqpqecsh kplrqsleep kiqvanpedl prscslhaaf qalhafrreq
      301 grlprprapa daervlelar slgaqqgpld edivrafasv sagdlcpvaa vvgalaaqev
      361 lkaitgrflp ldqwlyfdal eclalagaaq ltetdcaprg srydgqiavf ganfqenlgh
      421 qkylvvgaga igcellknfa mmglaagpdg elivtdmdtv alsnlhrqll yrsadisepk
      481 svvaaaavqr mnpdvrvtah qnqvgpatem lykdnffrhl dgvasaldti eartylerrc
      541 lrcrtpllds gtegtrgnvl amvpsltepl rpastprdgt fpmctlrhfp rtiqhtlqwa
      601 rdefeglfql paeqvnqfme dpafleqqpp gkvleqvwer lrerpqdwrd cvrwarrrwq
      661 scyhdaiaql lhtyppehet spgvpfwagd rscphpltfn adndthldyv laaahlfaqv
      721 hrvppcrdra aiqailrdvv lppfapqegl qiplteepte eaqvptdhrq lteltqdvvq
      781 wrqelvgded tqaplmvpih fekdndvhid fitaasnlra enygispanw ltskriagri
      841 vpaiitttaa vaglaclevy klvwgcqdls cyrnsnisls aclllrvqpp paptyrrthg
      901 wtvtmllcgd svlydskada etrarqqaqr lsesledarm lqqqdlelly icegedaeae
      961 dtrppllcsl p
//
LOCUS       XP_041321280             964 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-like modifier-activating enzyme 7 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321280
VERSION     XP_041321280.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465346.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..964
                     /product="ubiquitin-like modifier-activating enzyme 7
                     isoform X3"
                     /calculated_mol_wt=106151
     Region          6..950
                     /region_name="Ube1"
                     /note="ubiquitin-activating enzyme E1; TIGR01408"
                     /db_xref="CDD:273603"
     CDS             1..964
                     /gene="UBA7"
                     /coded_by="XM_041465346.1:2..2896"
                     /db_xref="GeneID:121352411"
ORIGIN      
        1 megseeepry srqlyvlggg arrlpgsavl vsglrgtgaq vatalvlagt grvvlhdcga
       61 actadrthqf lleesdlgqn rakasqrala elnphvvvea htgelseafl asfqvvvlte
      121 spleeqlrvg dfchaqgicf ivadtkglag qlfcdfgerf vvhdptegdp vsaavehisq
      181 gnpgvvtymg tenshghlfc dgdlvtfsgv qgmtelncqe pvpvhvldaf rleisdtssf
      241 spyrcgglis qvqqpqecsh kplrqsleep kiqvanpedl prscslhaaf qalhafrreq
      301 grlprprapa daervlelar slgaqqgpld edivrafasv sagdlcpvaa vvgalaaqev
      361 lkaitgrflp ldqwlyfdal eclalagaaq ltetdcaprg srydgqiavf ganfqenlgh
      421 qkylvvgaga igcellknfa mmglaagpdg elivtdmdtv alsnlhrqll yrsadisepk
      481 svvaaaavqr mnpdvrvtah qnqvgpatem lykdnffrhl dgvasaldti eartylerrc
      541 lrcrtpllds gtegtrgnvl amvpsltepl rpastprdgt fpmctlrhfp rtiqhtlqwa
      601 rdefeglfql paeqvnqfme dpafleqqpp gkvleqvwer lrerpqdwrd cvrwarrrwq
      661 scyhdaiaql lhtyppehet spgvpfwagd rscphpltfn adndthldyv laaahlfaqv
      721 hrvppcrdra aiqailrdvv lppfapqegl qiplteepte eaqvptdhrq lteltqdvvq
      781 wrqelvgded tqaplmvpih fekdndvhid fitaasnlra enygispanw ltskriagri
      841 vpaiitttaa vaglaclevy klvwgcqdls cyrnsnisls aclllrvqpp paptyryggr
      901 ewscwdrlem ravgadgqvm tvqevlqwlq rthgwtvtml lcgdsvlyds kadaetrarq
      961 qaqr
//
LOCUS       XP_041321287             942 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-like modifier-activating enzyme 7 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321287
VERSION     XP_041321287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465353.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..942
                     /product="ubiquitin-like modifier-activating enzyme 7
                     isoform X4"
                     /calculated_mol_wt=103837
     Region          6..939
                     /region_name="Ube1"
                     /note="ubiquitin-activating enzyme E1; TIGR01408"
                     /db_xref="CDD:273603"
     CDS             1..942
                     /gene="UBA7"
                     /coded_by="XM_041465353.1:2..2830"
                     /db_xref="GeneID:121352411"
ORIGIN      
        1 megseeepry srqlyvlggg arrlpgsavl vsglrgtgaq vatalvlagt grvvlhdcga
       61 actadrthqf lleesdlgqn rakasqrala elnphvvvea htgelseafl asfqvvvlte
      121 spleeqlrvg dfchaqgicf ivadtkglag qlfcdfgerf vvhdptegdp vsaavehisq
      181 gnpgvvtymg tenshghlfc dgdlvtfsgv qgmtelncqe pvpvhvldaf rleisdtssf
      241 spyrcgglis qvqqpqecsh kplrqsleep kiqvanpedl prscslhaaf qalhafrreq
      301 grlprprapa daervlelar slgaqqgpld edivrafasv sagdlcpvaa vvgalaaqev
      361 lkvgagaigc ellknfammg laagpdgeli vtdmdtvals nlhrqllyrs adisepksvv
      421 aaaavqrmnp dvrvtahqnq vgpatemlyk dnffrhldgv asaldtiear tylerrclrc
      481 rtplldsgte gtrgnvlamv pslteplrpa stprdgtfpm ctlrhfprti qhtlqwarde
      541 feglfqlpae qvnqfmedpa fleqqppgkv leqvwerlre rpqdwrdcvr warrrwqscy
      601 hdaiaqllht yppehetspg vpfwagdrsc phpltfnadn dthldyvlaa ahlfaqvhrv
      661 ppcrdraaiq ailrdvvlpp fapqeglqip lteepteeaq vptdhrqlte ltqdvvqwrq
      721 elvgdedtqa plmvpihfek dndvhidfit aasnlraeny gispanwlts kriagrivpa
      781 iitttaavag laclevyklv wgcqdlscyr nsnislsacl llrvqpppap tyryggrews
      841 cwdrlemrav gadgqvmtvq evlqwlqrth gwtvtmllcg dsvlydskad aetrarqqaq
      901 rlsesledar mlqqqdlell yicegedaea edtrppllcs lp
//
LOCUS       XP_041321300             356 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: PAK4-inhibitor INKA1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321300
VERSION     XP_041321300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465366.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="LOW QUALITY PROTEIN: PAK4-inhibitor INKA1"
                     /calculated_mol_wt=38353
     Region          188..245
                     /region_name="FAM212"
                     /note="FAM212 family; pfam15342"
                     /db_xref="CDD:434651"
     CDS             1..356
                     /gene="INKA1"
                     /coded_by="XM_041465366.1:1..1071"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121352428"
ORIGIN      
        1 mpsiptrggr pgqgrdrarp qcpplcttpl qaprhsssvg fgchptllhh aarsgtgkis
       61 welifgrwcr rdagptlrah mhgtrqtphh pgraagpapr aprpgsaads acsldpggee
      121 eegggpaars ppaserslef dsgyseasgg twreeevpvr rrhllpcqra hrlsagpaap
      181 ppaparrvrp kstsdacleq wralepadtq dwtvallsqs rnrqplvlgd ncfadlvenw
      241 mdlpevgaep rrrapaepsr rlakppafll slsgnvrrkl anmarprgad garpggrdat
      301 krfscplglg gqpkgacfhq shsniaqlat dfhrftalmn srsrqpiicn dvigyi
//
LOCUS       XP_041321314             262 aa            linear   VRT 06-MAY-2021
DEFINITION  RING1 and YY1-binding protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321314
VERSION     XP_041321314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="RING1 and YY1-binding protein isoform X1"
                     /calculated_mol_wt=28235
     Region          56..79
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          59..78
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          179..210
                     /region_name="YAF2_RYBP"
                     /note="Yaf2/RYBP C-terminal binding motif; pfam17219"
                     /db_xref="CDD:465386"
     CDS             1..262
                     /gene="LOC121352432"
                     /coded_by="XM_041465380.1:1..789"
                     /db_xref="GeneID:121352432"
ORIGIN      
        1 mvshvcvffl sssssslspp paaslllpkh trthtrfpsp spssrpkrqa kpaadegfwd
       61 csvctfrnsa eafkcsicdv rkgtstrkpr insqlvaqqv aqqyatpppp kkekkekvek
      121 qdkekpdkek eispsvtkkn tnkktkpksd ivkdppsean siqsgntttk tsdsnhtsrp
      181 rlknvdrsta qqlavtvgnv tviitdfkek trssstssst vtssagseqq nqsssgsest
      241 dkgssrsstp kgdmsavnde sf
//
LOCUS       XP_041321323             228 aa            linear   VRT 06-MAY-2021
DEFINITION  RING1 and YY1-binding protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321323
VERSION     XP_041321323.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465389.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="RING1 and YY1-binding protein isoform X2"
                     /calculated_mol_wt=24662
     Region          22..45
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          25..44
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          145..176
                     /region_name="YAF2_RYBP"
                     /note="Yaf2/RYBP C-terminal binding motif; pfam17219"
                     /db_xref="CDD:465386"
     CDS             1..228
                     /gene="LOC121352432"
                     /coded_by="XM_041465389.1:205..891"
                     /db_xref="GeneID:121352432"
ORIGIN      
        1 mvmgdkkspt rpkrqakpaa degfwdcsvc tfrnsaeafk csicdvrkgt strkprinsq
       61 lvaqqvaqqy atppppkkek kekvekqdke kpdkekeisp svtkkntnkk tkpksdivkd
      121 ppseansiqs gntttktsds nhtsrprlkn vdrstaqqla vtvgnvtvii tdfkektrss
      181 stssstvtss agseqqnqss sgsestdkgs srsstpkgdm savndesf
//
LOCUS       XP_041321333             638 aa            linear   VRT 06-MAY-2021
DEFINITION  netrin-4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321333
VERSION     XP_041321333.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465399.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..638
                     /product="netrin-4-like"
                     /calculated_mol_wt=71131
     Region          37..268
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); pfam00055"
                     /db_xref="CDD:459653"
     Region          269..323
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(270,272,279,296,298,307)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          335..395
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(335,337,344,362,365,374)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          398..449
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(398,400,416,423,425,434)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          528..636
                     /region_name="NTR_like"
                     /note="NTR_like domain; a beta barrel with an
                     oligosaccharide/oligonucleotide-binding fold found in
                     netrins, complement proteins, tissue inhibitors of
                     metalloproteases (TIMP), and procollagen C-proteinase
                     enhancers (PCOLCE), amongst others. In netrins, the...;
                     cl02512"
                     /db_xref="CDD:470599"
     CDS             1..638
                     /gene="LOC121352446"
                     /coded_by="XM_041465399.1:777..2693"
                     /db_xref="GeneID:121352446"
ORIGIN      
        1 mqhkgimllv fleyfisghg eadptrpraf rcsgracnpp vgnlatgrtp vttttcgqns
       61 telycsypdq nllhrlspgc gqprcakcni nqpnnshlpa dmtddffanp iswwqsaqgv
      121 hreeirldfe tefylthvia vfksprpaam vlersqdygq twrpykyfsv nctatfglqd
      181 dlieegsmct srysdavpct rgeviyrals pankiedpys peaqdllklt nlrllllkrq
      241 ecpchgsglv ekpqrfahya iydliirgsc fcnghaeece lanrtgvmen mvhgkcvcrh
      301 ntagdhcekc aplyndqpwk pgdgktgapn ecrkcrchsh aeschfdlsv wlasgkrsgg
      361 vcdnckhnte ghrcqrckpg fyrdrgkpls spevckpcac qpmgsanttf ssswrchprt
      421 gfcyckpgva gpscdrclvg ywgfgengcr pcdcardcdq rtgtclngyd sepffnvpig
      481 gripdlvqvp sneseeewkw ndheqgfsal rhpekcvcke kvlgsvsdfc qmkyayvika
      541 rilsahdkgt haevvvkvkk vlksgkvkia rsnrsiypes wtnrgctcpi lnpgtdylia
      601 gqedsrtgkl lvnmnslvkp wkaylgkqvs dilrtgck
//
LOCUS       XP_041321345             964 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein complementing XP-C cells [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321345
VERSION     XP_041321345.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465411.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..964
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..964
                     /product="DNA repair protein complementing XP-C cells"
                     /calculated_mol_wt=110168
     Region          172..892
                     /region_name="rad4"
                     /note="DNA repair protein rad4; TIGR00605"
                     /db_xref="CDD:273170"
     CDS             1..964
                     /gene="XPC"
                     /coded_by="XM_041465411.1:61..2955"
                     /db_xref="GeneID:121352455"
ORIGIN      
        1 mgrkrrastr paaakkrrsg glpkeeeeqq eeeeeeeddf edkkpsikkt skaparkkge
       61 dcdtevsksa ktskpskrep ksqikeskkn arnkencike etcsdplkhp qkemkiktes
      121 pvkkemdedn tdnddddese dewedveelq epatdkleea avlpsvglps npveieietp
      181 eqvkkrerre krkaefemyl rrmmkrfske vredthkvhl lcllangfyr nricsqpdll
      241 aiglsivptr ftqvpagqvg lvylsnlvkw fvgtftvnde lstekgeplq stlerrfaiy
      301 aaqddeelvh ifliilralq llcrlvlsfq piplketrpk gkssskrlsh sstseaqess
      361 attpkavaet cpckkakqde ksseskennk epkkpktaqt krthksklte gsqeqkesnn
      421 etssaekdvp vrpkndrrrr vaskvcykee sgsdegsasd felseeesdf sdedfesvpk
      481 rrrssqasqn sklttmkrsk aetsetrqsk nvceaetkpa ksatpglhqa qrkrnkiiss
      541 dedeghqemr kavgtdqwle vflepedkwv cvdcihgnvg qpqlcfahat kplfyvvgfd
      601 ndgsvrdvtq rydpvwmtst rksrvdpeww eetlqpyesp hvernkkeen efqvklqdqp
      661 lptaigeykn hplyalkrhl lkyqaiypet aailgycrge avysrdciht lhsrdtwlkq
      721 arvvrigevp ykmvrgfsnr arkarlaepa nrdledlalf grwqteeyqp piavdgkvpr
      781 neygnvylfl psmlpvgcvq lklpnlnrva rklnidcaqa itgfdfhggy shpvtdgyvv
      841 ceeykevlva aweneqaeie kkekekrekr algnwklltk gllirerlkq rysikaepsa
      901 petekgggfs sdeegapsse stvgntamyw pqnrqlekqe dittkkskre krgeaaqlfp
      961 fekl
//
LOCUS       XP_041321358             400 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 43 [Pyrgilauda ruficollis].
ACCESSION   XP_041321358
VERSION     XP_041321358.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465424.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..400
                     /product="transmembrane protein 43"
                     /calculated_mol_wt=44814
     Region          121..373
                     /region_name="TMEM43"
                     /note="Transmembrane protein 43; pfam07787"
                     /db_xref="CDD:462267"
     CDS             1..400
                     /gene="TMEM43"
                     /coded_by="XM_041465424.1:188..1390"
                     /db_xref="GeneID:121352463"
ORIGIN      
        1 msrnfsdtgs rkehvkitse pkpgflerls etsggmligl vtfllafyvl ftnegralrt
       61 aksldeglsl vvpldsihsi sqqnegrlvh lagalstskp lfdpsyglsi qavklkrnve
      121 myqwveyeds keseedgeik ketkysynte wksevvnsrn fdreighknp samavesfta
      181 vspnvqvgsf vlskglvdki ddfkqlslsh ledphadvtr redyfyhsdn prrpevgdlr
      241 vsffyaglsg ddphlgsadr vtviarqrgd qlvpyhtksg dvleilypgd lsveevfqke
      301 qesntmktwa lraagwlsmf vgislmtrif ytlvdwfpvv rdlvnvglka favcvassls
      361 lltiavgwlf yrplwalllv llsavpilla rsrvlpkkqq
//
LOCUS       XP_041321371             136 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial intermembrane space import and assembly protein 40
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321371
VERSION     XP_041321371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465437.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..136
                     /product="mitochondrial intermembrane space import and
                     assembly protein 40"
                     /calculated_mol_wt=14982
     Region          64..100
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..136
                     /gene="CHCHD4"
                     /coded_by="XM_041465437.1:202..612"
                     /db_xref="GeneID:121352467"
ORIGIN      
        1 msycrqegkd riifatkedh etpssaelva ddpddpyeeq glilpngdin wncpclggma
       61 sgpcgeqfks afscfhyste eikgsdcvdq framqecmqk ypdlypqede ndeksskdle
      121 aasmeasaak eeegss
//
LOCUS       XP_041321385             102 aa            linear   VRT 06-MAY-2021
DEFINITION  U6 snRNA-associated Sm-like protein LSm3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321385
VERSION     XP_041321385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..102
                     /product="U6 snRNA-associated Sm-like protein LSm3"
                     /calculated_mol_wt=11728
     Region          16..97
                     /region_name="LSm3"
                     /note="Like-Sm protein 3; cd01730"
                     /db_xref="CDD:212477"
     Site            order(21,24..25,30,32..34,37,39,44..47,50..51,53,84..96)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212477"
     Site            order(29..35,37..49,51..55)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212477"
     Site            order(47,49,88)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212477"
     Site            84..95
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212477"
     CDS             1..102
                     /gene="LSM3"
                     /coded_by="XM_041465451.1:94..402"
                     /db_xref="GeneID:121352472"
ORIGIN      
        1 madevdqqqt tntveepldl irlslderiy vkmrndrelr grlhaydqhl nmilgdveet
       61 vttieideet yeeiykstkr nipmlfvrgd gvvlvapplr vg
//
LOCUS       XP_041321397             822 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: interleukin-17 receptor C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321397
VERSION     XP_041321397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465463.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..822
                     /product="LOW QUALITY PROTEIN: interleukin-17 receptor C"
                     /calculated_mol_wt=86588
     Region          166..572
                     /region_name="IL17_R_N"
                     /note="Interleukin-17 receptor extracellular region;
                     pfam15037"
                     /db_xref="CDD:464460"
     Region          <666..794
                     /region_name="SEFIR"
                     /note="SEFIR domain; cl23749"
                     /db_xref="CDD:474043"
     CDS             1..822
                     /gene="IL17RC"
                     /coded_by="XM_041465463.1:1..2469"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 2 codons"
                     /db_xref="GeneID:121352478"
ORIGIN      
        1 mshrrcgcgg qpgavpvpws qvgcvgpqal pgwrdtepse vgagtggptp grpltprkep
       61 gvrdrsrkre psaavgpvep gerllassqr gagaprgpgp smhalgqlll vlvvgsaggr
      121 gdprdtlacs qgltcrlldt dvlcgteapg prhelalarl rlepalrcte ptacvpcvea
      181 rvrlalppat stgtesrlsv qpstsgteds gdggqwspat gatssqpnit gllllsghay
      241 assrcvavev waplrptlrg rsvgwvifrc feaplgselh isaymnsrgr qrlsqqqrvp
      301 dcswpaaqaa vpqcqvprlq vspgqkevvv evkgaavghs ytlrlyhnhs hgtsgpgrvv
      361 tmqsspvnhv lpadevlpcl clqvwletqd plratlcpff hdaeawdrlw aqsrlvlhie
      421 gqvltcslsa pcdllaelvp cwqpvpsgpc qpipglqqpa ggkgpqefgg lrphpnlcvq
      481 vwsggqvrlt qclrdralpg raddllllqh wgnaslcave rgactplasf tsrgagqpgl
      541 leqdlqrdva vgqcqqlwhp snrtgvvlwa cplhkylrth walvwmgvll gaacllllll
      601 mkkedmkgwl kslragygsn gplqgqrall vhaaepvaer aacalmaalh slgltvvaap
      661 gggsgvaalg plpwlhaqhh ralrdsdtii lllspaavaa aqqwdararv vpesgaaess
      721 lgprhspdpd dvpavapcev faaalscamp vlavadgryv varlealvpa vppalraapa
      781 falpsemegf lqalagparr rgrcpepyva avaeavqrav ge
//
LOCUS       XP_041321410             386 aa            linear   VRT 06-MAY-2021
DEFINITION  MAP kinase-activated protein kinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321410
VERSION     XP_041321410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..386
                     /product="MAP kinase-activated protein kinase 3"
                     /calculated_mol_wt=43729
     Region          41..306
                     /region_name="STKc_MAPKAPK3"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Mitogen-activated protein kinase-activated protein kinase
                     3; cd14172"
                     /db_xref="CDD:271074"
     Site            order(52..57,60,73,75,100,120..123,127,129,167..168,170,
                     172..173,175,188..189,192,205..209,211)
                     /site_type="active"
                     /db_xref="CDD:271074"
     Site            order(52..57,60,73,75,100,120..123,173,175,188..189)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271074"
     Site            order(54..57,59,208..212,216,218,221,242,244..247,
                     261..262,264..265,289..290)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271074"
     Site            order(56,127,129,167..168,170,172,192,205..209,211)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271074"
     Site            order(188..198,199..209)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271074"
     CDS             1..386
                     /gene="MAPKAPK3"
                     /coded_by="XM_041465476.1:262..1422"
                     /db_xref="GeneID:121352486"
ORIGIN      
        1 meqsegeqes qaesdvesks svkslpggta hvkleikkha vtddyklskr vlglgingkv
       61 lecfnketgq kcalkllydn pkarqeveyh wrasgcphiv hvldvyenih ngkrcllivm
      121 ecmeggelfs riqergdqaf tereaseimr digtaiqylh smniahrdvk penllytskd
      181 kdtvlkltdf gfakettvna lqtpcytpyy vapevlgpek ydkscdmwsl gvityillcg
      241 fppfysntgq aispgmkrri rmgqygfpnp ewaevseeak qlirhllktd ptermtvsqf
      301 mnhpwinrsm svpptplhta rvlqedkdhw devkeemtsa latmrvdydq vkikdlktsn
      361 nrllnkrrkk qkqagassaa pgcnnq
//
LOCUS       XP_041321419             386 aa            linear   VRT 06-MAY-2021
DEFINITION  MAP kinase-activated protein kinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321419
VERSION     XP_041321419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..386
                     /product="MAP kinase-activated protein kinase 3"
                     /calculated_mol_wt=43729
     Region          41..306
                     /region_name="STKc_MAPKAPK3"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Mitogen-activated protein kinase-activated protein kinase
                     3; cd14172"
                     /db_xref="CDD:271074"
     Site            order(52..57,60,73,75,100,120..123,127,129,167..168,170,
                     172..173,175,188..189,192,205..209,211)
                     /site_type="active"
                     /db_xref="CDD:271074"
     Site            order(52..57,60,73,75,100,120..123,173,175,188..189)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271074"
     Site            order(54..57,59,208..212,216,218,221,242,244..247,
                     261..262,264..265,289..290)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271074"
     Site            order(56,127,129,167..168,170,172,192,205..209,211)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271074"
     Site            order(188..198,199..209)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271074"
     CDS             1..386
                     /gene="MAPKAPK3"
                     /coded_by="XM_041465485.1:471..1631"
                     /db_xref="GeneID:121352486"
ORIGIN      
        1 meqsegeqes qaesdvesks svkslpggta hvkleikkha vtddyklskr vlglgingkv
       61 lecfnketgq kcalkllydn pkarqeveyh wrasgcphiv hvldvyenih ngkrcllivm
      121 ecmeggelfs riqergdqaf tereaseimr digtaiqylh smniahrdvk penllytskd
      181 kdtvlkltdf gfakettvna lqtpcytpyy vapevlgpek ydkscdmwsl gvityillcg
      241 fppfysntgq aispgmkrri rmgqygfpnp ewaevseeak qlirhllktd ptermtvsqf
      301 mnhpwinrsm svpptplhta rvlqedkdhw devkeemtsa latmrvdydq vkikdlktsn
      361 nrllnkrrkk qkqagassaa pgcnnq
//
LOCUS       XP_041321434            1120 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent calcium channel subunit alpha-2/delta-2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321434
VERSION     XP_041321434.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465500.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1120
                     /product="voltage-dependent calcium channel subunit
                     alpha-2/delta-2 isoform X1"
                     /calculated_mol_wt=126600
     Region          114..237
                     /region_name="VWA_N"
                     /note="VWA N-terminal; pfam08399"
                     /db_xref="CDD:462464"
     Region          249..428
                     /region_name="vWA_VGCC_like"
                     /note="VWA Voltage gated Calcium channel like:
                     Voltage-gated calcium channels are a complex of five
                     proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The
                     alpha 2 and delta subunits result from proteolytic
                     processing of a single gene product and carries at...;
                     cd01463"
                     /db_xref="CDD:238740"
     Site            order(269,271,273,341,373)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238740"
     Region          504..613
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          640..1085
                     /region_name="VGCC_alpha2"
                     /note="Neuronal voltage-dependent calcium channel alpha
                     2acd; pfam08473"
                     /db_xref="CDD:462488"
     CDS             1..1120
                     /gene="CACNA2D2"
                     /coded_by="XM_041465500.1:221..3583"
                     /db_xref="GeneID:121352495"
ORIGIN      
        1 mamaaptgsa apvapalcgh lalllllaap aahgysfpqq htmqywarrl eqeidgvmri
       61 fggvqqlrki yddnkslfev kenvprklve kvagdiesll akkvralkrl anaaekfqka
      121 hhwqdniree dieyydskad teyddpdgee iereksnslk leftdddnfk tkvnysyaav
      181 qiptdiykgs tvilnelnwt qaledvfien rkedpsllwq vfgsatgvtr yypatpwrap
      241 nkidlydvrr rpwyiqgass pkdmviivdv sgsvsgltlk lmktsvyeml dtlsdddyvn
      301 vasfnekakp vscfkhlvqa nirnkkvfke dvqgmvakgt tdykagfeya fdqlqnsnit
      361 rancnkmimm ftdggedrvq dvfekynwpn ktvrvftfsv gqhnydvtpl qwmacankgy
      421 yfeipsigai rintqeyldv lgrpmvlagn rakqvqwtnv yqdalglglv vtgtlpvfnl
      481 tedssdrknq lilgvmgidv alndikrltp rynlgangyv faidlngyvl lhpnlrpqii
      541 nfrepvtldf ldaeledenk eeirrsmidg ndgqrfiktl iksldeqyid evfrtytwap
      601 ikstnyslgl vlppystyyi qanlsdqilq vklpnikmkd feyllpnnfe seghvfiapr
      661 eyckdldlsd nnteflenfi almekvtpds kqcdnfllhn lildtgitqq lveqvwkdqd
      721 lntysllavf aatdggitrv fpnkaaddwe eepepfnasf yrrsldnkgy ifkppyrdag
      781 yrgldlennt igilvstave lsiggktlkp avvgvkldle awaekfkvla snrtdrdqlg
      841 trrcdpsssc emdceannkd licvliddgg flvlsnqedh wyqvgkffse vdanlmsaly
      901 nnsfyarkes ydfqsvcape apsntgaapr gvfvptvadl lslawwtsaa awslfqqfly
      961 sltysswfqt eevvgdgmea retscimkqt qyyfstvnat ynaiidcgnc srlfhaqrla
     1021 ntnllfvvad kplcsqcesv kllqaevrap prdpnqcelv drpryrkgph icfdynated
     1081 tsdcgrgasf spslgvllsl qllllyssts rhplppaacl
//
LOCUS       XP_041321442            1113 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent calcium channel subunit alpha-2/delta-2 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321442
VERSION     XP_041321442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1113
                     /product="voltage-dependent calcium channel subunit
                     alpha-2/delta-2 isoform X2"
                     /calculated_mol_wt=125823
     Region          114..237
                     /region_name="VWA_N"
                     /note="VWA N-terminal; pfam08399"
                     /db_xref="CDD:462464"
     Region          249..428
                     /region_name="vWA_VGCC_like"
                     /note="VWA Voltage gated Calcium channel like:
                     Voltage-gated calcium channels are a complex of five
                     proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The
                     alpha 2 and delta subunits result from proteolytic
                     processing of a single gene product and carries at...;
                     cd01463"
                     /db_xref="CDD:238740"
     Site            order(269,271,273,341,373)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238740"
     Region          504..613
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          633..1078
                     /region_name="VGCC_alpha2"
                     /note="Neuronal voltage-dependent calcium channel alpha
                     2acd; pfam08473"
                     /db_xref="CDD:462488"
     CDS             1..1113
                     /gene="CACNA2D2"
                     /coded_by="XM_041465508.1:221..3562"
                     /db_xref="GeneID:121352495"
ORIGIN      
        1 mamaaptgsa apvapalcgh lalllllaap aahgysfpqq htmqywarrl eqeidgvmri
       61 fggvqqlrki yddnkslfev kenvprklve kvagdiesll akkvralkrl anaaekfqka
      121 hhwqdniree dieyydskad teyddpdgee iereksnslk leftdddnfk tkvnysyaav
      181 qiptdiykgs tvilnelnwt qaledvfien rkedpsllwq vfgsatgvtr yypatpwrap
      241 nkidlydvrr rpwyiqgass pkdmviivdv sgsvsgltlk lmktsvyeml dtlsdddyvn
      301 vasfnekakp vscfkhlvqa nirnkkvfke dvqgmvakgt tdykagfeya fdqlqnsnit
      361 rancnkmimm ftdggedrvq dvfekynwpn ktvrvftfsv gqhnydvtpl qwmacankgy
      421 yfeipsigai rintqeyldv lgrpmvlagn rakqvqwtnv yqdalglglv vtgtlpvfnl
      481 tedssdrknq lilgvmgidv alndikrltp rynlgangyv faidlngyvl lhpnlrpqii
      541 nfrepvtldf ldaeledenk eeirrsmidg ndgqrfiktl iksldeqyid evfrtytwap
      601 ikstnyslgl vlppystyyi qanlsdqilq vkyfeyllpn nfeseghvfi apreyckdld
      661 lsdnntefle nfialmekvt pdskqcdnfl lhnlildtgi tqqlveqvwk dqdlntysll
      721 avfaatdggi trvfpnkaad dweeepepfn asfyrrsldn kgyifkppyr dagyrgldle
      781 nntigilvst avelsiggkt lkpavvgvkl dleawaekfk vlasnrtdrd qlgtrrcdps
      841 sscemdcean nkdlicvlid dggflvlsnq edhwyqvgkf fsevdanlms alynnsfyar
      901 kesydfqsvc apeapsntga aprgvfvptv adllslawwt saaawslfqq flysltyssw
      961 fqteevvgdg mearetscim kqtqyyfstv natynaiidc gncsrlfhaq rlantnllfv
     1021 vadkplcsqc esvkllqaev rapprdpnqc elvdrpryrk gphicfdyna tedtsdcgrg
     1081 asfspslgvl lslqllllys stsrhplppa acl
//
LOCUS       XP_041321451            1095 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent calcium channel subunit alpha-2/delta-2 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321451
VERSION     XP_041321451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1095
                     /product="voltage-dependent calcium channel subunit
                     alpha-2/delta-2 isoform X3"
                     /calculated_mol_wt=123791
     Region          114..237
                     /region_name="VWA_N"
                     /note="VWA N-terminal; pfam08399"
                     /db_xref="CDD:462464"
     Region          249..428
                     /region_name="vWA_VGCC_like"
                     /note="VWA Voltage gated Calcium channel like:
                     Voltage-gated calcium channels are a complex of five
                     proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The
                     alpha 2 and delta subunits result from proteolytic
                     processing of a single gene product and carries at...;
                     cd01463"
                     /db_xref="CDD:238740"
     Site            order(269,271,273,341,373)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238740"
     Region          479..588
                     /region_name="HK_sensor"
                     /note="Sensor domains of Histidine Kinase receptors;
                     cl38916"
                     /db_xref="CDD:365792"
     Region          615..1060
                     /region_name="VGCC_alpha2"
                     /note="Neuronal voltage-dependent calcium channel alpha
                     2acd; pfam08473"
                     /db_xref="CDD:462488"
     CDS             1..1095
                     /gene="CACNA2D2"
                     /coded_by="XM_041465517.1:222..3509"
                     /db_xref="GeneID:121352495"
ORIGIN      
        1 mamaaptgsa apvapalcgh lalllllaap aahgysfpqq htmqywarrl eqeidgvmri
       61 fggvqqlrki yddnkslfev kenvprklve kvagdiesll akkvralkrl anaaekfqka
      121 hhwqdniree dieyydskad teyddpdgee iereksnslk leftdddnfk tkvnysyaav
      181 qiptdiykgs tvilnelnwt qaledvfien rkedpsllwq vfgsatgvtr yypatpwrap
      241 nkidlydvrr rpwyiqgass pkdmviivdv sgsvsgltlk lmktsvyeml dtlsdddyvn
      301 vasfnekakp vscfkhlvqa nirnkkvfke dvqgmvakgt tdykagfeya fdqlqnsnit
      361 rancnkmimm ftdggedrvq dvfekynwpn ktvrvftfsv gqhnydvtpl qwmacankgy
      421 yfeipsigai rintqeyldv lgrpmvlagn rakqvqwtnv yqdalglglv vtgtlpvfnl
      481 tedssdrklg angyvfaidl ngyvllhpnl rpqiinfrep vtldfldael edenkeeirr
      541 smidgndgqr fiktliksld eqyidevfrt ytwapikstn yslglvlppy styyiqanls
      601 dqilqvklpn ikmkdfeyll pnnfeseghv fiapreyckd ldlsdnntef lenfialmek
      661 vtpdskqcdn fllhnlildt gitqqlveqv wkdqdlntys llavfaatdg gitrvfpnka
      721 addweeepep fnasfyrrsl dnkgyifkpp yrdagyrgld lenntigilv stavelsigg
      781 ktlkpavvgv kldleawaek fkvlasnrtd rdqlgtrrcd pssscemdce annkdlicvl
      841 iddggflvls nqedhwyqvg kffsevdanl msalynnsfy arkesydfqs vcapeapsnt
      901 gaaprgvfvp tvadllslaw wtsaaawslf qqflysltys swfqteevvg dgmearetsc
      961 imkqtqyyfs tvnatynaii dcgncsrlfh aqrlantnll fvvadkplcs qcesvkllqa
     1021 evrapprdpn qcelvdrpry rkgphicfdy natedtsdcg rgasfspslg vllslqllll
     1081 ysstsrhplp paacl
//
LOCUS       XP_041321464             405 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MYND domain-containing protein 10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321464
VERSION     XP_041321464.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465530.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="zinc finger MYND domain-containing protein 10"
                     /calculated_mol_wt=46179
     Region          356..392
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..405
                     /gene="ZMYND10"
                     /coded_by="XM_041465530.1:60..1277"
                     /db_xref="GeneID:121352510"
ORIGIN      
        1 mhgilsasag qeqlliellv thakipvlig elisveiwkh kvfpvlcrle dfrprstfpi
       61 yvvlhheasi inlletvffh keicesaeds ildlidychr kltllaarst kapavtsagl
      121 caeplaspss mqelqkqaev mefeislkal svlrfitdqv dslplsaltr mlnthnlpcl
      181 lvelvehcpw scweagklkk fengtwhvvp pedqvkmtkl dgqvwlalln lllrpecqrk
      241 yrfdgfnksq llklrafltd ilidqlpnlv emqrflsyla vtdpappkkd lileqvpviw
      301 dhilkknsgk weaiakhqvk hafspteeel rlqarrwaqt ysldmmeala pdkprcrvcg
      361 aeaakrcsrc rnewycsrac qvqhwqkhkp acnlmaevar svndl
//
LOCUS       XP_041321478             378 aa            linear   VRT 06-MAY-2021
DEFINITION  GATOR complex protein NPRL2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321478
VERSION     XP_041321478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="GATOR complex protein NPRL2 isoform X1"
                     /calculated_mol_wt=43317
     Region          5..368
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..378
                     /gene="NPRL2"
                     /coded_by="XM_041465544.1:124..1260"
                     /db_xref="GeneID:121352516"
ORIGIN      
        1 mggriecvff sefhptlgpk ityqvpedfi srelfdtiqv yvitkpelqn klitvtamek
       61 kligcpvcie hkkysrnall fnlgfvcdar akacalepiv kklagylttl elesgfisne
      121 eskqklvpim tilleelnak gkctlpides ntihlkvieq rpdppivqey dvpvftqdkd
      181 dffnsqwdlt tqqilpyidg frhvqkisae advelnlvri avqnllyygv vtlvsilqys
      241 nvycttpkvq dlvddkclqe eclsyvtkqg hkraslrdvf qlycglspgt tvrdlisryt
      301 lqlqrvderr liqfglmkgl irrlqkypvk vardershpa rlytgchsyd eiccktgmsy
      361 kelderlend pniivcwk
//
LOCUS       XP_041321487             363 aa            linear   VRT 06-MAY-2021
DEFINITION  GATOR complex protein NPRL2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321487
VERSION     XP_041321487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="GATOR complex protein NPRL2 isoform X2"
                     /calculated_mol_wt=41576
     Region          5..353
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..363
                     /gene="NPRL2"
                     /coded_by="XM_041465553.1:124..1215"
                     /db_xref="GeneID:121352516"
ORIGIN      
        1 mggriecvff sefhptlgpk ityqvpedfi srelfdtiqv tamekkligc pvciehkkys
       61 rnallfnlgf vcdarakaca lepivkklag ylttlelesg fisneeskqk lvpimtille
      121 elnakgkctl pidesntihl kvieqrpdpp ivqeydvpvf tqdkddffns qwdlttqqil
      181 pyidgfrhvq kisaeadvel nlvriavqnl lyygvvtlvs ilqysnvyct tpkvqdlvdd
      241 kclqeeclsy vtkqghkras lrdvfqlycg lspgttvrdl isrytlqlqr vderrliqfg
      301 lmkglirrlq kypvkvarde rshparlytg chsydeicck tgmsykelde rlendpniiv
      361 cwk
//
LOCUS       XP_041321492             321 aa            linear   VRT 06-MAY-2021
DEFINITION  GATOR complex protein NPRL2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321492
VERSION     XP_041321492.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465558.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="GATOR complex protein NPRL2 isoform X3"
                     /calculated_mol_wt=36774
     Region          4..311
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..321
                     /gene="NPRL2"
                     /coded_by="XM_041465558.1:138..1103"
                     /db_xref="GeneID:121352516"
ORIGIN      
        1 mekkligcpv ciehkkysrn allfnlgfvc darakacale pivkklagyl ttlelesgfi
       61 sneeskqklv pimtilleel nakgkctlpi desntihlkv ieqrpdppiv qeydvpvftq
      121 dkddffnsqw dlttqqilpy idgfrhvqki saeadvelnl vriavqnlly ygvvtlvsil
      181 qysnvycttp kvqdlvddkc lqeeclsyvt kqghkraslr dvfqlycgls pgttvrdlis
      241 rytlqlqrvd errliqfglm kglirrlqky pvkvarders hparlytgch sydeiccktg
      301 msykelderl endpniivcw k
//
LOCUS       XP_041321506             352 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 115 [Pyrgilauda ruficollis].
ACCESSION   XP_041321506
VERSION     XP_041321506.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465572.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="transmembrane protein 115"
                     /calculated_mol_wt=38190
     Region          50..152
                     /region_name="Rhomboid"
                     /note="Rhomboid family; cl21536"
                     /db_xref="CDD:451297"
     CDS             1..352
                     /gene="TMEM115"
                     /coded_by="XM_041465572.1:184..1242"
                     /db_xref="GeneID:121352527"
ORIGIN      
        1 mrrylpvarq hflaalagts vvvkslsaav vllyllsfgl dtayglgvtp gyllppnfwv
       61 wtllthglve erawglaasl atlgtagrll eplwgalell vffavvnisv gllaalayfl
      121 tyvasfhlhy lfavrihggl gflggvlval kqtmgdstvl kvpqvrmkav pmllllllal
      181 lrlaalvesn vlasygfgll sswvylrfyq rhsrgrgdms dhfafatffp eilqpvvglv
      241 anlvhsvlvk vrlcrktvkr ydvgapssit islpgtdpqd aerrrqlalk alnerlkrve
      301 dqsawpsmed eeeeataaak adspllpepg tagkspgqes nlisfqdapa ql
//
LOCUS       XP_041321518             222 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b561 domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321518
VERSION     XP_041321518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="cytochrome b561 domain-containing protein 2"
                     /calculated_mol_wt=24143
     Region          25..205
                     /region_name="Cyt_b561_CYB561D2_like"
                     /note="Eukaryotic cytochrome b(561), including the
                     CYB561D2 gene product; cd08761"
                     /db_xref="CDD:176491"
     Site            order(48,86,120,159)
                     /site_type="other"
                     /note="putative heme binding sites [chemical binding]"
                     /db_xref="CDD:176491"
     CDS             1..222
                     /gene="LOC121352533"
                     /coded_by="XM_041465584.1:136..804"
                     /db_xref="GeneID:121352533"
ORIGIN      
        1 maltaetesr lyrslrvvsg aaahlvalgf paavavlarp gsslfswhpl lmalafsflm
       61 teallifspe tsllrsfsrk vrvrvhwalq llallcallg lgiitynkhl ngkghfvtwh
      121 gltgllavly tggqcaggvl llypklmknw tlaklklyha tsglvgyllg caslmlgmcs
      181 lwftttvtga swylamlcpl vtslvimnqv snaylyrkrs qh
//
LOCUS       XP_041321534             784 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine--tRNA ligase [Pyrgilauda ruficollis].
ACCESSION   XP_041321534
VERSION     XP_041321534.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465600.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..784
                     /product="glutamine--tRNA ligase"
                     /calculated_mol_wt=88107
     Region          17..784
                     /region_name="PLN02859"
                     /note="glutamine-tRNA ligase"
                     /db_xref="CDD:178450"
     CDS             1..784
                     /gene="QARS1"
                     /coded_by="XM_041465600.1:33..2387"
                     /db_xref="GeneID:121352542"
ORIGIN      
        1 maaaaavmaa eeaeealglf tgiglseaka retlrngals allrqavlqa rsalgpaldk
       61 atgtllynta arlkdpkhlg flvgyiarre iltdlqlsaa leyvrshple pldvadfera
      121 cgvgvcitpe qieeaveavi skhrgellae ryhfnmgllm gearsqlrwa dgktiknevd
      181 lqvlhllgpk teadlekkpk vakarlapae kqkvavveng dmgtetqsll eqlrgealkf
      241 hkpgenykte gyvvtpntma llkqhlaitg gqvrtrfppe pngilhigha kainfnfgya
      301 kanggvcflr yddtnpekee ekyftairem vewlgyqpya vthasdyfdq lytwalelir
      361 rgqayvchqk veeikghnpp pspwrdrpve eslllfedmr kgkfgegeat lrmklvmedg
      421 kmdpvayrvk ftphhrtgdk wciyptydyt hclcdsiehi thslctkefq arrssyfwlc
      481 naldvycpvq weygrlnlly tvvskrkiir lvetgavrdw ddprlftlta lrrrgfppea
      541 innfcarvgv tvaqatmeph lleacarevl neqapramav leplkvtitn fpapkalevl
      601 vpnfpadesr gfhkvpfhqt iyieetdfre eadkgykrla pgqpvglrht gyvitvqnvi
      661 kdvsgrviel evtctksdva ekpkafihwv svplacevrl yerlflhknp edpsevpggf
      721 lsdlnpdslr vvhnalvdss vhsarpfdkf qferlgyfsv dpdseegkmv fnrtvtlked
      781 pgka
//
LOCUS       XP_041321547             154 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: urocortin-3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321547
VERSION     XP_041321547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465613.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..154
                     /product="LOW QUALITY PROTEIN: urocortin-3-like"
                     /calculated_mol_wt=16309
     Region          114..150
                     /region_name="CRF"
                     /note="Corticotropin-releasing factor family; pfam00473"
                     /db_xref="CDD:425703"
     CDS             1..154
                     /gene="LOC121352551"
                     /coded_by="XM_041465613.1:53..517"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121352551"
ORIGIN      
        1 mappatlrgr mllsflvllg aptgawkgps rewpspapqs vdggklmrqe stshnkmlpg
       61 lskmrrgddg sgagsqldea slsllegser qalpwlmspa akraapxkkg skvslsldvh
      121 thllkilldl arekelqaka aanaelmarl grrr
//
LOCUS       XP_041321561             354 aa            linear   VRT 06-MAY-2021
DEFINITION  MTRF1L release factor glutamine methyltransferase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321561
VERSION     XP_041321561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..354
                     /product="MTRF1L release factor glutamine
                     methyltransferase"
                     /calculated_mol_wt=39567
     Region          51..351
                     /region_name="HemK"
                     /note="Methylase of polypeptide chain release factors
                     [Translation, ribosomal structure and biogenesis];
                     COG2890"
                     /db_xref="CDD:442135"
     CDS             1..354
                     /gene="HEMK1"
                     /coded_by="XM_041465627.1:333..1397"
                     /db_xref="GeneID:121352559"
ORIGIN      
        1 mrcfthpllr kllslppqcv pgrgtqskga vlspkqlflr qscsagpglv tatdmanywq
       61 kvfetngipe aqessqyivs fvlgaktfqs ldskslhtpl talqqeqiqq lshkrlqrmp
      121 vqyvlgewdf qdltlkmrpp vfiprpeted lvslvveeef qkcensslcf pvpvphpvil
      181 eigcgsgaia lsllcklpqs rviamdkeka avdltrenay rlrlqerihi ihqdisnssa
      241 kqlllwgpid vivsnppyvf hedmasldae ilcyedldal dggddgmrvi ktilalapsl
      301 lkvsgsvfle vdprhpnmve hwlqahpell ltlraihkdf cgkprflhiq kqss
//
LOCUS       XP_041321572             147 aa            linear   VRT 06-MAY-2021
DEFINITION  sentan [Pyrgilauda ruficollis].
ACCESSION   XP_041321572
VERSION     XP_041321572.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465638.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="sentan"
                     /calculated_mol_wt=16017
     Region          54..138
                     /region_name="S-100"
                     /note="S-100 domain, which represents the largest family
                     within the superfamily of proteins carrying the Ca-binding
                     EF-hand motif. Note that this S-100 hierarchy contains
                     only S-100 EF-hand domains, other EF-hands have been
                     modeled separately. S100 proteins are...; cd00213"
                     /db_xref="CDD:238131"
     Site            order(54..71,75..76,85..86,88..90,118..121,123..124,
                     126..129,131..138)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(71,76,81..82,111,113,115,117,119,122)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..147
                     /gene="SNTN"
                     /coded_by="XM_041465638.1:1..444"
                     /db_xref="GeneID:121352568"
ORIGIN      
        1 mcgcrasvps mkqysvsqaa pastkkgppa aagmpkgvpi akqlasikal rkgsdlekaf
       61 ataalvynny adpesklsks etksllqsqf whfmqgqenk pkyqeiissl deesenkinf
      121 edfmillvsl tlmsdllqei nnvkttk
//
LOCUS       XP_041321583             338 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041321583
VERSION     XP_041321583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..338
                     /product="carbohydrate sulfotransferase 13"
                     /calculated_mol_wt=39720
     Region          99..330
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..338
                     /gene="CHST13"
                     /coded_by="XM_041465649.1:31..1047"
                     /db_xref="GeneID:121352578"
ORIGIN      
        1 mrrsraprla laaglgslll vlfyfqssls paseemrstw qgkagrsplq alyesdqfeq
       61 sslqavhqqr remlsnvcsr ytrkrrllrp ddlrhlvvdd ahgllycyvp kvactnwkrv
      121 mmvltgqgky qdpleipahe ahvpsnlrtl seysvpeins rlrsylkfvf vrepferlvs
      181 ayrnkftlsy ntafhkrygt kiirrhrqep seralergdd vrfeefvyyl ldprtqqeep
      241 fnehwervhs lchpciihyd vvgkyetlae danyilqlvg adtsvkfpas skttrttddm
      301 taqffqdisp fyqrrlfnly kmdyllfnys ipsylrir
//
LOCUS       XP_041321596             888 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA replication licensing factor MCM2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321596
VERSION     XP_041321596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..888
                     /product="DNA replication licensing factor MCM2"
                     /calculated_mol_wt=100255
     Region          <64..>138
                     /region_name="MCM2_N"
                     /note="Mini-chromosome maintenance protein 2; pfam12619"
                     /db_xref="CDD:403724"
     Region          184..274
                     /region_name="MCM_N"
                     /note="MCM N-terminal domain; pfam14551"
                     /db_xref="CDD:464206"
     Region          278..787
                     /region_name="MCM"
                     /note="minichromosome maintenance proteins; smart00350"
                     /db_xref="CDD:214631"
     Site            order(472,513..518,575,643,662,748..749)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350659"
     Site            order(492,497..498,511..513,529,545,550..552,555..559,
                     564..565,585,588..589,592..593,596..605,607..608,621..623,
                     653..654,656,659..660,662..663,666..667,669..673,719,721,
                     728,731,735..736,744,747..748,752,755)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:350659"
     Site            order(541,546,548,600..601)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350659"
     CDS             1..888
                     /gene="MCM2"
                     /coded_by="XM_041465662.1:31..2697"
                     /db_xref="GeneID:121352585"
ORIGIN      
        1 madssesqaa vtspvrssrr gdaftsspgr dlppfedese gllgteglpe eeeegeelig
       61 egmerdyrpi peldvyeaeg lalddedvee ltasqreaae rvmrqrdrel eqgmgrmrrg
      121 llydsddede drparkrrla eraaegmeee dedmiesien ledmkghsvr ewvsmaaprl
      181 eiyhrfknfl kthvddhghn vfkerisdmc kenreslvvn yedlaaqehv layflpeapa
      241 emlkifdeaa kevvlamypk ydriaqeihv rishlplvee lrslrqlhln qlirtsgvvt
      301 sctgvlpqls mikyncskcn filgpffqsq nqevkpgscp ecqslgpfei nmeetvyqny
      361 qrikiqespg kvaagrlprs kdailladlv dsckpgdeie ltgiyhnnyd gslntangfp
      421 vfatvilanh iakkdnklav geltdedvkv ivglskdeqi gekifasiap siyghedikr
      481 glalalfgge pknpggkhkv rgdinvllcg dpgtaksqfl kyiekvssra ifttgqgasa
      541 vgltayvqrh pvskewtlea galvladrgv clidefdkmn dqdrtsihea meqqsisisk
      601 agivtslqar ctiiaaanpi ggrydpsltf senvdltepi isrfdilcvv rdmvdpvqde
      661 mlarfvvgsh vkhhpgskea vngdtnevil pntygvepip qeilrkyivy akekvhpkln
      721 qmdqdkvarm ysdlrkesma tgsipitvrh iesmirmaea harmhlrdyv veddvnmair
      781 vmlesfidtq kfsvmrsmrk tfsrylsfkr dnnelllfil kqliaeqvmy qrnrygaqqd
      841 tievpekdlv dkarqinihn lsafydsevf kmnrfsrdvk rklivqqf
//
LOCUS       XP_041321609             957 aa            linear   VRT 06-MAY-2021
DEFINITION  contactin-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321609
VERSION     XP_041321609.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465675.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..957
                     /product="contactin-4"
                     /calculated_mol_wt=104816
     Region          <2..48
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          10..14
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          25..30
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          39..42
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          57..142
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          68..72
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          82..86
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          107..111
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          121..126
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          137..140
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          155..243
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          173..177
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          186..190
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          208..212
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          222..227
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          235..238
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          248..331
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          263..267
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          276..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          297..301
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..316
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          324..327
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          336..424
                     /region_name="Ig5_Contactin"
                     /note="Fifth immunoglobulin (Ig) domain of contactin;
                     cd04969"
                     /db_xref="CDD:409358"
     Region          336..341
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409358"
     Region          344..349
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409358"
     Region          353..360
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409358"
     Region          368..372
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409358"
     Region          386..389
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409358"
     Region          390..395
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409358"
     Region          403..411
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409358"
     Region          417..424
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409358"
     Region          426..527
                     /region_name="Ig6_Contactin-4"
                     /note="Sixth immunoglobulin (Ig) domain of contactin-4;
                     cd05853"
                     /db_xref="CDD:409439"
     Region          426..432
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409439"
     Region          435..440
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409439"
     Region          443..451
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409439"
     Region          460..464
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409439"
     Region          485..488
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409439"
     Region          489..493
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409439"
     Region          502..509
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409439"
     Region          516..520
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409439"
     Region          527..620
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(527,596,611)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(612..613,615..616)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          633..725
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          <699..>938
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(715..716,718..719)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..957
                     /gene="CNTN4"
                     /coded_by="XM_041465675.1:157..3030"
                     /db_xref="GeneID:121352591"
ORIGIN      
        1 mdyryslleg dllinnpnks ldagtyqcva tnpfgtivsr eaklqfayle nfktrtrstv
       61 svrqgqgmvl lcgppphsge ltyawifney ptfvhqdnrr fvsqetgnly iakvetsdvg
      121 nytcvvtntv tnskvlgppt plvlrndgvm geyepkievq fpetvpsakg ttvklecfal
      181 gnpvptiswr radgkqlprk arrhrssgll eipnfqqeda glyecvaenv rgknvargql
      241 tfyaqpswtq qirdvhaaie ervswecras grpkpsyrwl kdgepllpqg rvqleqgslt
      301 ipnvslsdag myqcvaenrh gvifasaels viaigpdfsk tllkkltlvk vggeviieck
      361 pkasprptys wkkgkdilre neritvlddg slrivnvtks dagsytcvat nhfgtasstg
      421 slvvkdptrv mvspfsmdvt vgesivlpcq vshdhsldiv ftwsfnghli dfekdgdhfe
      481 rvggqdsagd lmirsiqlkh agkyvcmvqt svdklsaaad livrgppgpp eavtieevtd
      541 staqlswrpg adnhspitmy avqartpfsv gwqavstvpe vidgrtftat vvglnpwvey
      601 efrvvaanli gigepsrpse krrteealpe vtpanvsggg gskselvitw etvpeelqng
      661 ggfgyvvafr plgtvswmqt vvaspdaary vfrneslppf spyevkvgvy nnkgegsfsp
      721 vtvvysaeee ptrapttvla rsisasdvev swappwenqh kgriqgyevr cwrhdekeen
      781 akrirtvgnq tstkvsnlrg nalyhlavra yntagtgpss aavnvttkkp ppsqppgniv
      841 wnssdskiil nwdqvkaldn esevrgykvl yrwnressts vietnktsve lslpfdedyi
      901 ieikpfsdgg dgssseqiri pkisnayarg sgsstssact lsalstimis ltarssl
//
LOCUS       XP_041321621             288 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptoporin [Pyrgilauda ruficollis].
ACCESSION   XP_041321621
VERSION     XP_041321621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="synaptoporin"
                     /calculated_mol_wt=31635
     Region          16..216
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..288
                     /gene="SYNPR"
                     /coded_by="XM_041465687.1:103..969"
                     /db_xref="GeneID:121352597"
ORIGIN      
        1 meavdqlasa gtfrvvkepl aflrvlewlf aifafatcgg ysgelrlsvd ctnksesdls
       61 idiafaypfr lhqvnfeapt cegkrketla ligdfsssae ffvtiavfaf lyslaatvvy
      121 iffqnkyren nrgplidfiv tvvfsflwlv sssawakgls dvkvatdpde vlllmsackq
      181 qsnkclpvrs pvmsslntsv vfgylnfilw agniwfvfke tgwhssgqrh padtmekqpg
      241 gynqggynqd sygpaggynq pgsygqvgey gqsqsygqsg ptsfanqi
//
LOCUS       XP_041321633             738 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-17 receptor D [Pyrgilauda ruficollis].
ACCESSION   XP_041321633
VERSION     XP_041321633.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465699.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..738
                     /product="interleukin-17 receptor D"
                     /calculated_mol_wt=82829
     Region          48..169
                     /region_name="IL17R_D_N"
                     /note="N-terminus of interleukin 17 receptor D; pfam16742"
                     /db_xref="CDD:465254"
     Region          356..510
                     /region_name="SEFIR"
                     /note="SEFIR domain; pfam08357"
                     /db_xref="CDD:254756"
     CDS             1..738
                     /gene="IL17RD"
                     /coded_by="XM_041465699.1:67..2283"
                     /db_xref="GeneID:121352606"
ORIGIN      
        1 mapglqlgsf llalaaclgg arlaagaagg rrgpaadaca grglssvtkn ngllnitfky
       61 dnctpylssv grhvigdvqn itisqfacqe qvavmilwta naigieylkg frvileelks
      121 egrqcqqmvl kdpkqlspsf krtgmesqpf vnlkfetdyf vkivpfpsik nesnyhpfff
      181 rtrscelllq penlvckpyw kprnvnvtqq gfnmqvsfdh aphnfgfryy flhyklkheg
      241 lfkqktcrqe qntdttscvl qnvspgdyii elvddtnttr ktmhyalkpv hspwagpira
      301 iaitvplvvi safatlftvm crkkqqeniy shldeesses sayaaglhve rlrprpkvfi
      361 cysskdcqkh inviqcfayf lqdfcgceva ldlwedlknc kedqkewlik kinesqfiii
      421 vcskgmkyfv ekknwkhrgv tkdagkgepf lfavltvaek lrqakqnsad lckfiavyfd
      481 yscegdipai ldlstkyklm dnlpqlyshl hsrdlsaqds evfpvniskr nyfrsksgrs
      541 lyvaicnmhq fidqepdwfe kqfipfppps lhysepimek fdsglvlndl vnkqvmdgdf
      601 ylktdlnisv gnsdshcviq hlnlgediet qdiqgggssv lqpllhvvka snlkdmprds
      661 giydssvpss elslplmegl ltdqmetssi tgsvssssgl geeeppvmta tkflvpgick
      721 aelhchihad elqaiapl
//
LOCUS       XP_041321640            1505 aa            linear   VRT 06-MAY-2021
DEFINITION  DDB1- and CUL4-associated factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321640
VERSION     XP_041321640.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465706.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1505
                     /product="DDB1- and CUL4-associated factor 1 isoform X1"
                     /calculated_mol_wt=168686
     Region          1089..>1286
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1093..1129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1135..1210
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1215..1252
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1258..1288
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1505
                     /gene="DCAF1"
                     /coded_by="XM_041465706.1:146..4663"
                     /db_xref="GeneID:121352613"
ORIGIN      
        1 mtsgsghvds kaelttlleq wekehgsgqd mvpiltrmse lieketeeyr kgdpdpfddr
       61 hpgradpecm lghllrilfk nddfmnalvn ayvmtsrepp lntaacrlll dimpgletav
      121 vfqekegive nlfkwaread qplrtyatgl lggamenqdi aanyrdensq lvalvlrrlr
      181 elqvtemttk qenkrpsprk vpsdpllpld eeavdmdyge mtvdgeqeev sgdmeisfhl
      241 dsshktssrv nsaaklddgg lrrsksgkqh erdgfrkakq klgfstsepe rmfvelsnss
      301 wsemspwvig tnytlypltp aieqrlilqy ltplgeyqel lpifmqlgsr elmmyyidlk
      361 rtndvlltfe alkhlaslll hnkfatefva hggvqkllei prpsmaatgv smclyylsyn
      421 qdamervcmh phnvlsdvvn ytlwlmecsh asgcchatmf fsicfsfrav lelfdrhdgl
      481 rrlvnlistl eilnledqga llsddeifas rqtgkhtcma lrryfeahla ikleqvkqsl
      541 qrteggilvh pqppykacsy theqivemme flieygpaql ywepaevflk lscvqlmlql
      601 isiacnwkty yarndtvrya ldvlailtvv pkiqlqlaep vdvldeagst vstvgisiil
      661 gvaegeffih daeiqksalq iiincvcgpd nrissigkfi sgtprrklpq apkssehtla
      721 kmwnvvqsnn gikvllslls vkmpitdadq iralackalv glsrsstvrq iisklplfss
      781 cqiqqlmkep vlqdkrsehv kfckyaaeli ervsgkplli gtdvslarlq kadvvaqsri
      841 tfpekellll irnhliskgl getasvltke adlpmtaash ssaftpvaaa aspvtlprtp
      901 riangisarl sshtavgsta tsvhaqarps asqgppalpg psyasnspli grisfvrerp
      961 spcngrkirv lrqksdhgay sqspaikkql drhlpspptl dsiiteylre qharcknpva
     1021 tcppfslftp hqcpepkqrr qaptnftsrl trraafpkyg gvdggcfdrh lifsrfrpis
     1081 vfreanedes gftccafsar erflmlgtct gqlklynvfs gqeeasynch nsaithleps
     1141 rdgsllltsa twsqplsalw gmksvfdmkh sfpddhyvef skhsqdrvig tkgdiahiyd
     1201 iqtgnklltl fnpdlannyk kncatfnptd dlvlndgvlw dvrsaqaihk fdkfnmtisg
     1261 vfhpnglevi vnteiwdlrt fhllhtvpal dqcrvvfnyt gtvmygamlq addeddllee
     1321 rmrspfgssf rtfnatdykp iatidvkrni fdlctdskdc ylavienqgs mdamnmdtvc
     1381 rlyevgrqrl aedeedeeed qeeeeqeeed ddeddddtdd ldeldtdqll eaeleedenn
     1441 enagedgend fspsddeeia nlleegdege dedsdadeev elilgdtdss dnsdleddii
     1501 lslne
//
LOCUS       XP_041321643            1505 aa            linear   VRT 06-MAY-2021
DEFINITION  DDB1- and CUL4-associated factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321643
VERSION     XP_041321643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1505
                     /product="DDB1- and CUL4-associated factor 1 isoform X1"
                     /calculated_mol_wt=168686
     Region          1089..>1286
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1093..1129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1135..1210
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1215..1252
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1258..1288
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1505
                     /gene="DCAF1"
                     /coded_by="XM_041465709.1:29..4546"
                     /db_xref="GeneID:121352613"
ORIGIN      
        1 mtsgsghvds kaelttlleq wekehgsgqd mvpiltrmse lieketeeyr kgdpdpfddr
       61 hpgradpecm lghllrilfk nddfmnalvn ayvmtsrepp lntaacrlll dimpgletav
      121 vfqekegive nlfkwaread qplrtyatgl lggamenqdi aanyrdensq lvalvlrrlr
      181 elqvtemttk qenkrpsprk vpsdpllpld eeavdmdyge mtvdgeqeev sgdmeisfhl
      241 dsshktssrv nsaaklddgg lrrsksgkqh erdgfrkakq klgfstsepe rmfvelsnss
      301 wsemspwvig tnytlypltp aieqrlilqy ltplgeyqel lpifmqlgsr elmmyyidlk
      361 rtndvlltfe alkhlaslll hnkfatefva hggvqkllei prpsmaatgv smclyylsyn
      421 qdamervcmh phnvlsdvvn ytlwlmecsh asgcchatmf fsicfsfrav lelfdrhdgl
      481 rrlvnlistl eilnledqga llsddeifas rqtgkhtcma lrryfeahla ikleqvkqsl
      541 qrteggilvh pqppykacsy theqivemme flieygpaql ywepaevflk lscvqlmlql
      601 isiacnwkty yarndtvrya ldvlailtvv pkiqlqlaep vdvldeagst vstvgisiil
      661 gvaegeffih daeiqksalq iiincvcgpd nrissigkfi sgtprrklpq apkssehtla
      721 kmwnvvqsnn gikvllslls vkmpitdadq iralackalv glsrsstvrq iisklplfss
      781 cqiqqlmkep vlqdkrsehv kfckyaaeli ervsgkplli gtdvslarlq kadvvaqsri
      841 tfpekellll irnhliskgl getasvltke adlpmtaash ssaftpvaaa aspvtlprtp
      901 riangisarl sshtavgsta tsvhaqarps asqgppalpg psyasnspli grisfvrerp
      961 spcngrkirv lrqksdhgay sqspaikkql drhlpspptl dsiiteylre qharcknpva
     1021 tcppfslftp hqcpepkqrr qaptnftsrl trraafpkyg gvdggcfdrh lifsrfrpis
     1081 vfreanedes gftccafsar erflmlgtct gqlklynvfs gqeeasynch nsaithleps
     1141 rdgsllltsa twsqplsalw gmksvfdmkh sfpddhyvef skhsqdrvig tkgdiahiyd
     1201 iqtgnklltl fnpdlannyk kncatfnptd dlvlndgvlw dvrsaqaihk fdkfnmtisg
     1261 vfhpnglevi vnteiwdlrt fhllhtvpal dqcrvvfnyt gtvmygamlq addeddllee
     1321 rmrspfgssf rtfnatdykp iatidvkrni fdlctdskdc ylavienqgs mdamnmdtvc
     1381 rlyevgrqrl aedeedeeed qeeeeqeeed ddeddddtdd ldeldtdqll eaeleedenn
     1441 enagedgend fspsddeeia nlleegdege dedsdadeev elilgdtdss dnsdleddii
     1501 lslne
//
LOCUS       XP_041321653            1492 aa            linear   VRT 06-MAY-2021
DEFINITION  DDB1- and CUL4-associated factor 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321653
VERSION     XP_041321653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1492
                     /product="DDB1- and CUL4-associated factor 1 isoform X2"
                     /calculated_mol_wt=167282
     Region          1089..>1286
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1093..1129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1135..1210
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1215..1252
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1258..1288
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1492
                     /gene="DCAF1"
                     /coded_by="XM_041465719.1:146..4624"
                     /db_xref="GeneID:121352613"
ORIGIN      
        1 mtsgsghvds kaelttlleq wekehgsgqd mvpiltrmse lieketeeyr kgdpdpfddr
       61 hpgradpecm lghllrilfk nddfmnalvn ayvmtsrepp lntaacrlll dimpgletav
      121 vfqekegive nlfkwaread qplrtyatgl lggamenqdi aanyrdensq lvalvlrrlr
      181 elqvtemttk qenkrpsprk vpsdpllpld eeavdmdyge mtvdgeqeev sgdmeisfhl
      241 dsshktssrv nsaaklddgg lrrsksgkqh erdgfrkakq klgfstsepe rmfvelsnss
      301 wsemspwvig tnytlypltp aieqrlilqy ltplgeyqel lpifmqlgsr elmmyyidlk
      361 rtndvlltfe alkhlaslll hnkfatefva hggvqkllei prpsmaatgv smclyylsyn
      421 qdamervcmh phnvlsdvvn ytlwlmecsh asgcchatmf fsicfsfrav lelfdrhdgl
      481 rrlvnlistl eilnledqga llsddeifas rqtgkhtcma lrryfeahla ikleqvkqsl
      541 qrteggilvh pqppykacsy theqivemme flieygpaql ywepaevflk lscvqlmlql
      601 isiacnwkty yarndtvrya ldvlailtvv pkiqlqlaep vdvldeagst vstvgisiil
      661 gvaegeffih daeiqksalq iiincvcgpd nrissigkfi sgtprrklpq apkssehtla
      721 kmwnvvqsnn gikvllslls vkmpitdadq iralackalv glsrsstvrq iisklplfss
      781 cqiqqlmkep vlqdkrsehv kfckyaaeli ervsgkplli gtdvslarlq kadvvaqsri
      841 tfpekellll irnhliskgl getasvltke adlpmtaash ssaftpvaaa aspvtlprtp
      901 riangisarl sshtavgsta tsvhaqarps asqgppalpg psyasnspli grisfvrerp
      961 spcngrkirv lrqksdhgay sqspaikkql drhlpspptl dsiiteylre qharcknpva
     1021 tcppfslftp hqcpepkqrr qaptnftsrl trraafpkyg gvdggcfdrh lifsrfrpis
     1081 vfreanedes gftccafsar erflmlgtct gqlklynvfs gqeeasynch nsaithleps
     1141 rdgsllltsa twsqplsalw gmksvfdmkh sfpddhyvef skhsqdrvig tkgdiahiyd
     1201 iqtgnklltl fnpdlannyk kncatfnptd dlvlndgvlw dvrsaqaihk fdkfnmtisg
     1261 vfhpnglevi vnteiwdlrt fhllhtvpal dqcrvvfnyt gtvmygamlq addeddllee
     1321 rmrspfgssf rtfnatdykp iatidvkrni fdlctdskdc ylavienqgs mdamnmdtvc
     1381 rlyevgrqrl aedeedeeed qeeeeqeeed ddeddddtdd ldeldtdqll eaeleedenn
     1441 enagedgend fspsddeeia nlleegdege dedsdadeev elilgdiicc iq
//
LOCUS       XP_041321663            1402 aa            linear   VRT 06-MAY-2021
DEFINITION  DDB1- and CUL4-associated factor 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321663
VERSION     XP_041321663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1402
                     /product="DDB1- and CUL4-associated factor 1 isoform X3"
                     /calculated_mol_wt=157128
     Region          1089..>1286
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          1093..1129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1135..1210
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1215..1252
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1258..1288
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1402
                     /gene="DCAF1"
                     /coded_by="XM_041465729.1:146..4354"
                     /db_xref="GeneID:121352613"
ORIGIN      
        1 mtsgsghvds kaelttlleq wekehgsgqd mvpiltrmse lieketeeyr kgdpdpfddr
       61 hpgradpecm lghllrilfk nddfmnalvn ayvmtsrepp lntaacrlll dimpgletav
      121 vfqekegive nlfkwaread qplrtyatgl lggamenqdi aanyrdensq lvalvlrrlr
      181 elqvtemttk qenkrpsprk vpsdpllpld eeavdmdyge mtvdgeqeev sgdmeisfhl
      241 dsshktssrv nsaaklddgg lrrsksgkqh erdgfrkakq klgfstsepe rmfvelsnss
      301 wsemspwvig tnytlypltp aieqrlilqy ltplgeyqel lpifmqlgsr elmmyyidlk
      361 rtndvlltfe alkhlaslll hnkfatefva hggvqkllei prpsmaatgv smclyylsyn
      421 qdamervcmh phnvlsdvvn ytlwlmecsh asgcchatmf fsicfsfrav lelfdrhdgl
      481 rrlvnlistl eilnledqga llsddeifas rqtgkhtcma lrryfeahla ikleqvkqsl
      541 qrteggilvh pqppykacsy theqivemme flieygpaql ywepaevflk lscvqlmlql
      601 isiacnwkty yarndtvrya ldvlailtvv pkiqlqlaep vdvldeagst vstvgisiil
      661 gvaegeffih daeiqksalq iiincvcgpd nrissigkfi sgtprrklpq apkssehtla
      721 kmwnvvqsnn gikvllslls vkmpitdadq iralackalv glsrsstvrq iisklplfss
      781 cqiqqlmkep vlqdkrsehv kfckyaaeli ervsgkplli gtdvslarlq kadvvaqsri
      841 tfpekellll irnhliskgl getasvltke adlpmtaash ssaftpvaaa aspvtlprtp
      901 riangisarl sshtavgsta tsvhaqarps asqgppalpg psyasnspli grisfvrerp
      961 spcngrkirv lrqksdhgay sqspaikkql drhlpspptl dsiiteylre qharcknpva
     1021 tcppfslftp hqcpepkqrr qaptnftsrl trraafpkyg gvdggcfdrh lifsrfrpis
     1081 vfreanedes gftccafsar erflmlgtct gqlklynvfs gqeeasynch nsaithleps
     1141 rdgsllltsa twsqplsalw gmksvfdmkh sfpddhyvef skhsqdrvig tkgdiahiyd
     1201 iqtgnklltl fnpdlannyk kncatfnptd dlvlndgvlw dvrsaqaihk fdkfnmtisg
     1261 vfhpnglevi vnteiwdlrt fhllhtvpal dqcrvvfnyt gtvmygamlq addeddllee
     1321 rmrspfgssf rtfnatdykp iatidvkrni fdlctdskdc ylavienqgs mdamnmdtvc
     1381 rlyevgrqrl aedeedeeed qt
//
LOCUS       XP_041321676            1474 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase ARIP4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321676
VERSION     XP_041321676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1474
                     /product="helicase ARIP4 isoform X1"
                     /calculated_mol_wt=163452
     Region          53..899
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          281..557
                     /region_name="DEXHc_ARIP4"
                     /note="DEXH-box helicase domain of ARIP4; cd18069"
                     /db_xref="CDD:350827"
     Site            order(317..323,356,473..474)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350827"
     CDS             1..1474
                     /gene="RAD54L2"
                     /coded_by="XM_041465742.1:177..4601"
                     /db_xref="GeneID:121352626"
ORIGIN      
        1 msdesisgsd pdldpdleqe dmeeeeeede eeameedndg ddeedlldes dqpqeavfsg
       61 dhaehaedge wqrststtss qseraeqllq nqhkslased tkkkraqkps hmrrnirkll
      121 redqleavtk aaqqeelerr krleqqrkdy pasiptvple flpedivfrt aeatqlppqv
      181 laeeviclds tssgseddtk gknsikdevi elssgeddal qivdssdsgn egeedgsees
      241 sgshvndaln qsdalgqviv ninhppneed iflapqlara vkphqiggir flydnlvesl
      301 erfktssgfg cilahsmglg ktiqvisfld vlfrhteakt vlaivpvntl qnwlaefnmw
      361 lpapenlpad ynskevqprt fkvhilndeh kttaarakvv ndwvteggvl lmgyemyrll
      421 slkksfatgr kkrtkkqtgp viidldeedr qqellkgiek alsrpgpdvv icdeghrikn
      481 chastsqalk nirsrrrvvl tgyplqnnli eywcmvdfvr pdflgsrqef snmferpiln
      541 gqcidstpqd vrlmryrshv lhsllegfvq rrghnvlkvq lpskeehvil vrlskiqrdl
      601 ytefmnrfrd agnsgwlgln plkafcvcck iwnhpdvlye alqkenlane qdldvddlst
      661 antnsrcqpq gikvktesna laspvgeatn skflqsvgfn pfqeranqvv tyewakdilc
      721 dyqtgvlens pkmvllfhli eesvklgdki lvfsqslstl svieeflakr pmpsppgsdg
      781 gvhnwvrnin yyrldgstsa sererlinqf ndasnasvwl fllstragcl gvnliganrv
      841 vvfdaswnpc hdaqavcrvy rygqkkpchi yrlvsdytle kkiydrqisk qgmsdrvvdd
      901 lnpvlnftrr evenllhfve eesdpaqlsl nlskmkesvl qlaclkyphl itkepfqhes
      961 llidrkehkl tkaekkaakk syeeekrasv pytrpsyaqy ypasdqslts ipafsqrnwr
     1021 palkgedkpv asvrpvqstp ipmmprhvpm ggagstsssn pavnfpinyl qragvfvqki
     1081 vtttdivipg tntstdvqar isagesihii rgtkgtyirt sdgrifairt tgkpkgnedr
     1141 rtaasgsqss slestsngrh sasspqlpst eeltrpispd speiiselqq yaeaaaares
     1201 rhsspstaas qghaartdna pgaaargaeq rvgvpcmaps vssalpatsq hsdahpvldl
     1261 rgnkrkstsp sapeeqsrrq qkkrqlpssv qpyehgypvs ggftmppvsl nhnlthpfas
     1321 qpgnslymgt gssyyqlpnl lpdphlvfpv ttdplltagt asssaatsat asvpsfmlnp
     1381 slagvlpnys lpftqsllpe prmfapfpap vlpsslprsm asaypgyvsp hsgypaggll
     1441 rsqvpqfepq evpevgcssn dedkdddvie itgk
//
LOCUS       XP_041321684            1435 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase ARIP4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321684
VERSION     XP_041321684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1435
                     /product="helicase ARIP4 isoform X2"
                     /calculated_mol_wt=159047
     Region          11..860
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          242..518
                     /region_name="DEXHc_ARIP4"
                     /note="DEXH-box helicase domain of ARIP4; cd18069"
                     /db_xref="CDD:350827"
     Site            order(278..284,317,434..435)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350827"
     CDS             1..1435
                     /gene="RAD54L2"
                     /coded_by="XM_041465750.1:593..4900"
                     /db_xref="GeneID:121352626"
ORIGIN      
        1 mllldesqqf pdqpqeavfs gdhaehaedg ewqrststts sqseraeqll qnqhkslase
       61 dtkkkraqkp shmrrnirkl lredqleavt kaaqqeeler rkrleqqrkd ypasiptvpl
      121 eflpedivfr taeatqlppq vlaeevicld stssgseddt kgknsikdev ielssgedda
      181 lqivdssdsg negeedgsee ssgshvndal nqsdalgqvi vninhppnee diflapqlar
      241 avkphqiggi rflydnlves lerfktssgf gcilahsmgl gktiqvisfl dvlfrhteak
      301 tvlaivpvnt lqnwlaefnm wlpapenlpa dynskevqpr tfkvhilnde hkttaarakv
      361 vndwvteggv llmgyemyrl lslkksfatg rkkrtkkqtg pviidldeed rqqellkgie
      421 kalsrpgpdv vicdeghrik nchastsqal knirsrrrvv ltgyplqnnl ieywcmvdfv
      481 rpdflgsrqe fsnmferpil ngqcidstpq dvrlmryrsh vlhsllegfv qrrghnvlkv
      541 qlpskeehvi lvrlskiqrd lytefmnrfr dagnsgwlgl nplkafcvcc kiwnhpdvly
      601 ealqkenlan eqdldvddls tantnsrcqp qgikvktesn alaspvgeat nskflqsvgf
      661 npfqeranqv vtyewakdil cdyqtgvlen spkmvllfhl ieesvklgdk ilvfsqslst
      721 lsvieeflak rpmpsppgsd ggvhnwvrni nyyrldgsts asererlinq fndasnasvw
      781 lfllstragc lgvnliganr vvvfdaswnp chdaqavcrv yrygqkkpch iyrlvsdytl
      841 ekkiydrqis kqgmsdrvvd dlnpvlnftr revenllhfv eeesdpaqls lnlskmkesv
      901 lqlaclkyph litkepfqhe sllidrkehk ltkaekkaak ksyeeekras vpytrpsyaq
      961 yypasdqslt sipafsqrnw rpalkgedkp vasvrpvqst pipmmprhvp mggagstsss
     1021 npavnfpiny lqragvfvqk ivtttdivip gtntstdvqa risagesihi irgtkgtyir
     1081 tsdgrifair ttgkpkgned rrtaasgsqs sslestsngr hsasspqlps teeltrpisp
     1141 dspeiiselq qyaeaaaare srhsspstaa sqghaartdn apgaaargae qrvgvpcmap
     1201 svssalpats qhsdahpvld lrgnkrksts psapeeqsrr qqkkrqlpss vqpyehgypv
     1261 sggftmppvs lnhnlthpfa sqpgnslymg tgssyyqlpn llpdphlvfp vttdplltag
     1321 tasssaatsa tasvpsfmln pslagvlpny slpftqsllp eprmfapfpa pvlpsslprs
     1381 masaypgyvs phsgypaggl lrsqvpqfep qevpevgcss ndedkdddvi eitgk
//
LOCUS       XP_041321693            1322 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase ARIP4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321693
VERSION     XP_041321693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465759.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1322
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1322
                     /product="helicase ARIP4 isoform X3"
                     /calculated_mol_wt=147586
     Region          53..899
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          281..557
                     /region_name="DEXHc_ARIP4"
                     /note="DEXH-box helicase domain of ARIP4; cd18069"
                     /db_xref="CDD:350827"
     Site            order(317..323,356,473..474)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350827"
     CDS             1..1322
                     /gene="RAD54L2"
                     /coded_by="XM_041465759.1:177..4145"
                     /db_xref="GeneID:121352626"
ORIGIN      
        1 msdesisgsd pdldpdleqe dmeeeeeede eeameedndg ddeedlldes dqpqeavfsg
       61 dhaehaedge wqrststtss qseraeqllq nqhkslased tkkkraqkps hmrrnirkll
      121 redqleavtk aaqqeelerr krleqqrkdy pasiptvple flpedivfrt aeatqlppqv
      181 laeeviclds tssgseddtk gknsikdevi elssgeddal qivdssdsgn egeedgsees
      241 sgshvndaln qsdalgqviv ninhppneed iflapqlara vkphqiggir flydnlvesl
      301 erfktssgfg cilahsmglg ktiqvisfld vlfrhteakt vlaivpvntl qnwlaefnmw
      361 lpapenlpad ynskevqprt fkvhilndeh kttaarakvv ndwvteggvl lmgyemyrll
      421 slkksfatgr kkrtkkqtgp viidldeedr qqellkgiek alsrpgpdvv icdeghrikn
      481 chastsqalk nirsrrrvvl tgyplqnnli eywcmvdfvr pdflgsrqef snmferpiln
      541 gqcidstpqd vrlmryrshv lhsllegfvq rrghnvlkvq lpskeehvil vrlskiqrdl
      601 ytefmnrfrd agnsgwlgln plkafcvcck iwnhpdvlye alqkenlane qdldvddlst
      661 antnsrcqpq gikvktesna laspvgeatn skflqsvgfn pfqeranqvv tyewakdilc
      721 dyqtgvlens pkmvllfhli eesvklgdki lvfsqslstl svieeflakr pmpsppgsdg
      781 gvhnwvrnin yyrldgstsa sererlinqf ndasnasvwl fllstragcl gvnliganrv
      841 vvfdaswnpc hdaqavcrvy rygqkkpchi yrlvsdytle kkiydrqisk qgmsdrvvdd
      901 lnpvlnftrr evenllhfve eesdpaqlsl nlskmkesvl qlaclkyphl itkepfqhes
      961 llidrkehkl tkaekkaakk syeeekrasv pytrpsyaqy ypasdqslts ipafsqrnwr
     1021 palkgedkpv asvrpvqstp ipmmprhvpm ggagstsssn pavnfpinyl qragvfvqki
     1081 vtttdivipg tntstdvqar isagesihii rgtkgtyirt sdgrifairt tgkpkgnedr
     1141 rtaasgsqss slestsngrh sasspqlpst eeltrpispd speiiselqq yaeaaaares
     1201 rhsspstaas qghaartdna pgaaargaeq rvgvpcmaps vssalpatsq hsdahpvldl
     1261 rgnkrkstsp sapeeqsrrq qkkrqlpssv qpyehgypvs gvenrgvlsk lldnlsldap
     1321 wk
//
LOCUS       XP_041321705            1418 aa            linear   VRT 06-MAY-2021
DEFINITION  macrophage-stimulating protein receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041321705
VERSION     XP_041321705.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465771.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1418
                     /product="macrophage-stimulating protein receptor"
                     /calculated_mol_wt=155393
     Region          21..516
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          519..561
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          562..683
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          684..771
                     /region_name="IPT"
                     /note="Immunoglobulin-like fold, Plexins, Transcription
                     factors (IPT). IPTs are also known as Transcription factor
                     ImmunoGlobin (TIG) domains. They are present in
                     intracellular transcription factors, cell surface
                     receptors (such as plexins and scatter factor...; cl15674"
                     /db_xref="CDD:472823"
     Region          772..864
                     /region_name="IPT"
                     /note="ig-like, plexins, transcription factors;
                     smart00429"
                     /db_xref="CDD:214657"
     Region          1099..1360
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(1101..1104,1107,1109,1125,1127,1157,1174..1177,1221,
                     1225..1226,1228,1238..1239)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1418
                     /gene="MST1R"
                     /coded_by="XM_041465771.1:217..4473"
                     /db_xref="GeneID:121352640"
ORIGIN      
        1 mglwccvclw llltlataga wqcpripyss trnfsipytl psldvgspiq nvavftdsdg
       61 pvaafvavrn rilllspelr llsvlvtgpv gsakceicrl cpattdgped tdnvlllldp
      121 lepwlyscgt aqhglcyqhq levqdgkvai tathclysam gnspafcpdc vvsplgtsat
      181 vvatsyasvf ylgstinssv aaryspqsvs irrlkgtldg fsndfqrltv lpqyrdsyti
      241 hyvhsfadgd hvyflmvqpe rpgstvyhtr larlstherh lrryrelvld crfeskrrrr
      301 rsgeedaerd iaynvlqaah aarpgarlar dlgindtdtv lfgafaesrp esrvpqensa
      361 vcafplrlln qameegmekc cgtghqpllr glsfyqpvey cphnvnlsap vvdtrcwdqp
      421 tlvpagsykv dlfngqltgv lltslfvtam gdvtvahlgt aegrifqmvl qrsssylltl
      481 snfslgepgp vrgamglqsh slfftagtkv wllnvtgpgc rhfstcqrcl raerfmgcgw
      541 cgdgcrrrhe cpghwvqdsc ppvltdfhpr saplrgrtrv tlcgmtfrsq sdpdpshspr
      601 gayrvavgrr gctvlpgesd syrplptsrr kefvhvlvce lepgapaaag gpaavvltve
      661 eparpsgfrv ygsatlggfv fvephvsalh ppfgprgggt hlslhgkhls agsswrvmvn
      721 gsecaltgqp rqgngtiqct apaagglgaa wislwidgee fpapvpfqyr pdpavsaivp
      781 scsyegsllt iigthldsvy rakirfeagg vitqatecks plapdrllch spafpfeskv
      841 evvlgnlsvl ldgadgrwlf rlryfsrpkv yplvqegrrl rlkpgddeie vhqlgldava
      901 tcmnismtvg gldchpnvlk nevtcrlpre lrlppagapv eicvngacea lgwvlsppts
      961 ldlaaslalg tgitflvcci laavlfrwrw kkrrgtenle llaqpgrsdp pvttqrpgvd
     1021 yrevlvlnta gtpgpvgprt rvtsagangs agagaagggs pvpllratsc cledlrpell
     1081 eevkdilipe erlvthrhqv igkghfgsvy hgtytdpllg dlhcavkslh ritdleevee
     1141 flregilmks fhhpqvlsll gvclprhglp lvvlpymrhg dlrqfirtqe rsptmkelig
     1201 fglqvalgme ylaqkkfvhr dlaarncmld etltvkvadf glardvfgke yysiqqhrha
     1261 klpvkwmale slqtqkfttk sdvwsfgvlm welltrgasp yagvdpydma hyllqgrrlp
     1321 qpshcpdtly rvmlscwapa pedrpsftgl vaelervlat ldgehyvnln vtytnldwgp
     1381 pfppappgql pdsededkhn eeeeeeneee edddtsvc
//
LOCUS       XP_041321717            1181 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321717
VERSION     XP_041321717.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465783.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1181
                     /product="RNA-binding protein 6"
                     /calculated_mol_wt=135032
     Region          476..553
                     /region_name="RRM1_RBM6"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding protein 6 (RBM6); cd12314"
                     /db_xref="CDD:409753"
     Region          689..775
                     /region_name="RRM2_RBM6"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding protein 6 (RBM6); cd12563"
                     /db_xref="CDD:409979"
     Region          804..854
                     /region_name="OCRE_RBM6"
                     /note="OCRE domain found in RNA-binding protein 6 (RBM6)
                     and similar proteins; cd16163"
                     /db_xref="CDD:293882"
     Region          809..816
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293882"
     Region          818..825
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293882"
     Region          826..833
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293882"
     Region          834..841
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293882"
     Region          843..850
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293882"
     Region          1111..1153
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     CDS             1..1181
                     /gene="RBM6"
                     /coded_by="XM_041465783.1:157..3702"
                     /db_xref="GeneID:121352644"
ORIGIN      
        1 mwgdhrqgnr mgsfrgsqee rfapgwnrey ppsldslgqe rhsgnfsgrk slpfdiqals
       61 gllnpqfanr eepsfsygar dgprsdfrgg dghhdfrgrd fppsdfqgrd esqmdfrgre
      121 pppseyrgrd mysgdfrere gppmdfrggd vpsgdyrnrd tfrmnyrdre ahnmdyrgre
      181 epppdfrgrg sydfdfrard gphsdfrard mseldyrgre hsysdfrnrd vpdldfrgmg
      241 tsdldfrnrn apssdfrnrh rsrsdqdfrs rdvappmdfs dremppvdqs lvdfrhnqst
      301 vplaeregsg lstskrdesa lsldrspfgs qkgefqhsea pareeeslgl glqddtshnf
      361 qnsrgplptl qdqeeqpqtf ankqqqqqls ggeqqrsdsd lglkgegdld flgrqdtdyr
      421 nmeyrdvdhr lpghqmfdye hgksfaegkp skdsrpyknl qdqdyrtcpk yvkpsklirl
      481 ggvpetatkd dilnafrgpd gtpvkdlrlk dyssgydygy vcvefsllee aigcmeanqg
      541 tltiggkevt leytpcpefw rckrckvctv gyrsscsyck lprdgsragp esrggaeged
      601 tsaeqeftet kleapeqels gqpgspkqpl qpsvpapqqe cqpqeqeprk rdegrehrps
      661 qekrrdmdrh qeppsqreae eatppdgggs rtimlkritr ftppevivgl lapyvrlsts
      721 svrimknkag rmgqtygfie leshaealrl lkilqnldpp icidgrtlev nlatgrkrnd
      781 ygehsdnsyy gpgrrgmrdr rggesqrrtr aqspsdvsty iydpdtgnyy dpiagtyydp
      841 rtqrevtidr epsppptesr rrrhgsqewt sdrkephgrd nrdkkdkgks tsaknepgee
      901 rffaedvfkk plppsvkkde sagltetgee kfsaedvfkk plppsvkkee saappkvvnp
      961 ligllgeygg dsdneeeeee eeqsqaqwlp ppphppapre eqprkakasd dkltdwnkla
     1021 cllcrrqfpn kevlikhqql snlhkqnlei hmkikqseqe laylekrere grhkdkgndr
     1081 rekfqqmdsp erkrlrydrd sesdydprvd snnkgnrmvq spgwkkgfgh nqqgtaspve
     1141 aenrrkgpgl gapgkppkrq snetyrdavr rvmfarykel e
//
LOCUS       XP_041321727            1181 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321727
VERSION     XP_041321727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1181
                     /product="RNA-binding protein 6"
                     /calculated_mol_wt=135032
     Region          476..553
                     /region_name="RRM1_RBM6"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding protein 6 (RBM6); cd12314"
                     /db_xref="CDD:409753"
     Region          689..775
                     /region_name="RRM2_RBM6"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding protein 6 (RBM6); cd12563"
                     /db_xref="CDD:409979"
     Region          804..854
                     /region_name="OCRE_RBM6"
                     /note="OCRE domain found in RNA-binding protein 6 (RBM6)
                     and similar proteins; cd16163"
                     /db_xref="CDD:293882"
     Region          809..816
                     /region_name="OCRE repeat 1"
                     /note="OCRE repeat 1 [structural motif]"
                     /db_xref="CDD:293882"
     Region          818..825
                     /region_name="OCRE repeat 2"
                     /note="OCRE repeat 2 [structural motif]"
                     /db_xref="CDD:293882"
     Region          826..833
                     /region_name="OCRE repeat 3"
                     /note="OCRE repeat 3 [structural motif]"
                     /db_xref="CDD:293882"
     Region          834..841
                     /region_name="OCRE repeat 4"
                     /note="OCRE repeat 4 [structural motif]"
                     /db_xref="CDD:293882"
     Region          843..850
                     /region_name="OCRE repeat 5"
                     /note="OCRE repeat 5 [structural motif]"
                     /db_xref="CDD:293882"
     Region          1111..1153
                     /region_name="G-patch"
                     /note="G-patch domain; pfam01585"
                     /db_xref="CDD:396249"
     CDS             1..1181
                     /gene="RBM6"
                     /coded_by="XM_041465793.1:144..3689"
                     /db_xref="GeneID:121352644"
ORIGIN      
        1 mwgdhrqgnr mgsfrgsqee rfapgwnrey ppsldslgqe rhsgnfsgrk slpfdiqals
       61 gllnpqfanr eepsfsygar dgprsdfrgg dghhdfrgrd fppsdfqgrd esqmdfrgre
      121 pppseyrgrd mysgdfrere gppmdfrggd vpsgdyrnrd tfrmnyrdre ahnmdyrgre
      181 epppdfrgrg sydfdfrard gphsdfrard mseldyrgre hsysdfrnrd vpdldfrgmg
      241 tsdldfrnrn apssdfrnrh rsrsdqdfrs rdvappmdfs dremppvdqs lvdfrhnqst
      301 vplaeregsg lstskrdesa lsldrspfgs qkgefqhsea pareeeslgl glqddtshnf
      361 qnsrgplptl qdqeeqpqtf ankqqqqqls ggeqqrsdsd lglkgegdld flgrqdtdyr
      421 nmeyrdvdhr lpghqmfdye hgksfaegkp skdsrpyknl qdqdyrtcpk yvkpsklirl
      481 ggvpetatkd dilnafrgpd gtpvkdlrlk dyssgydygy vcvefsllee aigcmeanqg
      541 tltiggkevt leytpcpefw rckrckvctv gyrsscsyck lprdgsragp esrggaeged
      601 tsaeqeftet kleapeqels gqpgspkqpl qpsvpapqqe cqpqeqeprk rdegrehrps
      661 qekrrdmdrh qeppsqreae eatppdgggs rtimlkritr ftppevivgl lapyvrlsts
      721 svrimknkag rmgqtygfie leshaealrl lkilqnldpp icidgrtlev nlatgrkrnd
      781 ygehsdnsyy gpgrrgmrdr rggesqrrtr aqspsdvsty iydpdtgnyy dpiagtyydp
      841 rtqrevtidr epsppptesr rrrhgsqewt sdrkephgrd nrdkkdkgks tsaknepgee
      901 rffaedvfkk plppsvkkde sagltetgee kfsaedvfkk plppsvkkee saappkvvnp
      961 ligllgeygg dsdneeeeee eeqsqaqwlp ppphppapre eqprkakasd dkltdwnkla
     1021 cllcrrqfpn kevlikhqql snlhkqnlei hmkikqseqe laylekrere grhkdkgndr
     1081 rekfqqmdsp erkrlrydrd sesdydprvd snnkgnrmvq spgwkkgfgh nqqgtaspve
     1141 aenrrkgpgl gapgkppkrq snetyrdavr rvmfarykel e
//
LOCUS       XP_041321737             762 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3D-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321737
VERSION     XP_041321737.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465803.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..762
                     /product="semaphorin-3D-like"
                     /calculated_mol_wt=86205
     Region          49..526
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          525..>550
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          584..675
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          584..590
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409455"
     Region          595..603
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(597,642)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          609..615
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          617..620
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          630..634
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          637..644
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          650..659
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          662..675
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..762
                     /gene="LOC121352654"
                     /coded_by="XM_041465803.1:217..2505"
                     /db_xref="GeneID:121352654"
ORIGIN      
        1 mwaapghwls latlllclql gssrawkqqa prlrltykdl lksnssrlll asgdgmefqa
       61 llmdedrawl mvgaknhifl lhldhpsrep ekifwpapre qvehcqlagk naetecanfi
      121 rllqpfnqsh vfacgtgsyq pvcafiqlga rgkgaraprm qlvthslesg rgrcpysphe
      181 pftglligge lysgtssdfm gssaaffrtw vhgaeqsyir teqnqdhwlh epvfvgayti
      241 pdtynphddk vyiffretam dagqweqrhi harvarvckn dvggkrslin rwstflkarl
      301 vcsipgpqgt ethfdqledv fllrtrdpqn plvfglftvs sgvfsgsavc iysmaavraa
      361 fsgpfahkeg fdyrwveykg rvpyprpgtc psetydpllq stkdfpdeli sfmrshqlmw
      421 epvypqgrqp vllrvnvpyr lrrllvhrld tesrdydvlf lgtddgkvlk valaggasrg
      481 pevisleeis vtkvpspild mklspkrqel fvssthgllq lslyrcelyg ksctdcclar
      541 dpyctwdskt caphlltekr rarcqdvlka dplsqcqdta egttavekvv fgveknstfl
      601 eclarspqit irwlvrrgee tapsevrnng hflvleqgll irllsredvg tyecqavers
      661 fsrlltrysl rvirheatel pphkrskgve pggthqsprp ridlnpsskg fpralgapgt
      721 sldaycnalr lqerqrqraw hkwqhqspds kngrvrrhpq rl
//
LOCUS       XP_041321746             549 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar fusion protein MON1 homolog A [Pyrgilauda ruficollis].
ACCESSION   XP_041321746
VERSION     XP_041321746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..549
                     /product="vacuolar fusion protein MON1 homolog A"
                     /calculated_mol_wt=61874
     Region          150..272
                     /region_name="Fuz_longin_1"
                     /note="First Longin domain of FUZ, MON1 and HPS1;
                     pfam19036"
                     /db_xref="CDD:465953"
     Region          310..404
                     /region_name="Fuz_longin_2"
                     /note="Second Longin domain of FUZ, MON1 and HPS1;
                     pfam19037"
                     /db_xref="CDD:465954"
     Region          438..538
                     /region_name="Fuz_longin_3"
                     /note="Third Longin domain of FUZ, MON1 and HPS1;
                     pfam19038"
                     /db_xref="CDD:465955"
     CDS             1..549
                     /gene="MON1A"
                     /coded_by="XM_041465812.1:192..1841"
                     /db_xref="GeneID:121352664"
ORIGIN      
        1 maadvhkkks wevpngslap gdgqhaerse sptpglaqgt epgagqegam fvhtrsyedl
       61 tspedgaaaa rspeerrgep aeqssmeqis kdfselstql tgmaldldee mragkegkle
      121 pspqtarrds vlsgkeeedv tmdtwrlhrk hvfvlseagk pvysrygsee alsstmgvmm
      181 alvsfleaek nairsihadg ykvvfvrrsp lvlvavartr qseqeiahel lyiyyqilsl
      241 ltwtqlnhif qqkqnydlrr llagseritd nlldlmahdp sflmgavrcl plaasvrdav
      301 ssslqqakak slvfsillsg nqlvslvrkk dqflhpidlh llfnlissss sfregeawtp
      361 iclpkfnssg ffhahisyle qemdlclllv stdredfftv sdckrrfqer lrrrgvhhal
      421 qealrtpfys vaqvgipdlr hfiykskssg lftspeieap yvqeeekerl lglyqylhsr
      481 ahnssrplkn iyftgprenl lawvtnafel yvcysplgtk againavnkl mkwirkeedr
      541 lfiltpqty
//
LOCUS       XP_041321755             549 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar fusion protein MON1 homolog A [Pyrgilauda ruficollis].
ACCESSION   XP_041321755
VERSION     XP_041321755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..549
                     /product="vacuolar fusion protein MON1 homolog A"
                     /calculated_mol_wt=61874
     Region          150..272
                     /region_name="Fuz_longin_1"
                     /note="First Longin domain of FUZ, MON1 and HPS1;
                     pfam19036"
                     /db_xref="CDD:465953"
     Region          310..404
                     /region_name="Fuz_longin_2"
                     /note="Second Longin domain of FUZ, MON1 and HPS1;
                     pfam19037"
                     /db_xref="CDD:465954"
     Region          438..538
                     /region_name="Fuz_longin_3"
                     /note="Third Longin domain of FUZ, MON1 and HPS1;
                     pfam19038"
                     /db_xref="CDD:465955"
     CDS             1..549
                     /gene="MON1A"
                     /coded_by="XM_041465821.1:20..1669"
                     /db_xref="GeneID:121352664"
ORIGIN      
        1 maadvhkkks wevpngslap gdgqhaerse sptpglaqgt epgagqegam fvhtrsyedl
       61 tspedgaaaa rspeerrgep aeqssmeqis kdfselstql tgmaldldee mragkegkle
      121 pspqtarrds vlsgkeeedv tmdtwrlhrk hvfvlseagk pvysrygsee alsstmgvmm
      181 alvsfleaek nairsihadg ykvvfvrrsp lvlvavartr qseqeiahel lyiyyqilsl
      241 ltwtqlnhif qqkqnydlrr llagseritd nlldlmahdp sflmgavrcl plaasvrdav
      301 ssslqqakak slvfsillsg nqlvslvrkk dqflhpidlh llfnlissss sfregeawtp
      361 iclpkfnssg ffhahisyle qemdlclllv stdredfftv sdckrrfqer lrrrgvhhal
      421 qealrtpfys vaqvgipdlr hfiykskssg lftspeieap yvqeeekerl lglyqylhsr
      481 ahnssrplkn iyftgprenl lawvtnafel yvcysplgtk againavnkl mkwirkeedr
      541 lfiltpqty
//
LOCUS       XP_041321769             150 aa            linear   VRT 06-MAY-2021
DEFINITION  caveolin-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321769
VERSION     XP_041321769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..150
                     /product="caveolin-3"
                     /calculated_mol_wt=16986
     Region          14..147
                     /region_name="Caveolin"
                     /note="pfam01146"
                     /db_xref="CDD:460081"
     CDS             1..150
                     /gene="CAV3"
                     /coded_by="XM_041465835.1:48..500"
                     /db_xref="GeneID:121352671"
ORIGIN      
        1 maeehgeleg iivkdqhtke idlvnrdpkh inedvvkvdf edviaepvgt ysfdgvwkss
       61 yttftvskyw cyrllsallg vplavvwgfl falisfchiw avvpciksyl ieiqcvsriy
      121 slcihtfcdp lfealakics nvrvavrkei
//
LOCUS       XP_041321781              75 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L29 [Pyrgilauda ruficollis].
ACCESSION   XP_041321781
VERSION     XP_041321781.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465847.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..75
                     /product="60S ribosomal protein L29"
                     /calculated_mol_wt=8675
     Region          4..42
                     /region_name="Ribosomal_L29e"
                     /note="Ribosomal L29e protein family; pfam01779"
                     /db_xref="CDD:460324"
     CDS             1..75
                     /gene="RPL29"
                     /coded_by="XM_041465847.1:148..375"
                     /db_xref="GeneID:121352678"
ORIGIN      
        1 maksknhtth nqsrkwhrng ikkpkthrye slkgvdpkfl rnmrfakkhn kkglkkmqan
       61 nakqaaqqaa qqkkd
//
LOCUS       XP_041321792             403 aa            linear   VRT 06-MAY-2021
DEFINITION  aminomethyltransferase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041321792
VERSION     XP_041321792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="aminomethyltransferase, mitochondrial"
                     /calculated_mol_wt=42919
     Region          1..400
                     /region_name="gcvT"
                     /note="glycine cleavage system aminomethyltransferase
                     GcvT; cl39066"
                     /db_xref="CDD:476863"
     CDS             1..403
                     /gene="AMT"
                     /coded_by="XM_041465858.1:115..1326"
                     /db_xref="GeneID:121352689"
ORIGIN      
        1 mlragcraal srrppgsapr rgaggsgage gglkqtplda lhrarggrmv pfagwtlplh
       61 ygqghlqshl htrrhcslfd vshmlqtlvy grdrvrfmes lvvgdiaelk pgqgtltllt
      121 nekggitddl ivtntsedhl yvvsnaacad kdlailrdra aqlqatgsdv hlevsdnall
      181 alqgpsmarv lqaglsddla klsfmnsitt tvfgvpgcrv trcgytgedg veisvpaaqa
      241 velaeqllgv pdvwlaglaa rdslrleagl clygndidet vtpaeaglmw tlgkrrrvam
      301 dfpgaavima qvkekprrrr vgltsvgpai rphmailgpe grpvgtvtsg cpspclgkni
      361 amgyveaahs ragteltvev rkkqhpavit rmpfvptqyy mak
//
LOCUS       XP_041321806             212 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily B member 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041321806
VERSION     XP_041321806.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465872.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="dnaJ homolog subfamily B member 8"
                     /calculated_mol_wt=24260
     Region          3..66
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(31..33,43,46..47,50..51)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..212
                     /gene="DNAJB8"
                     /coded_by="XM_041465872.1:141..779"
                     /db_xref="GeneID:121352698"
ORIGIN      
        1 mvdyykvlgl qknasqdaik ktyhklalkw hpdknpknke eaekkfkeiv eayeilsdpq
       61 krllydksve esrarrerst vdyssfsgsh hgspeqeevf rstypftcif lnsfdiring
      121 edwqntggrg grpremfvpq nsfcpdghha sffaentsgp ygprtvittt evingktitt
      181 rkifedgqet keveedgqlk sviingreyl nl
//
LOCUS       XP_041321817             218 aa            linear   VRT 06-MAY-2021
DEFINITION  histone H1.10 [Pyrgilauda ruficollis].
ACCESSION   XP_041321817
VERSION     XP_041321817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="histone H1.10"
                     /calculated_mol_wt=22978
     Region          56..129
                     /region_name="H15"
                     /note="linker histone 1 and histone 5 domains; the basic
                     subunit of chromatin is the nucleosome, consisting of an
                     octamer of core histones, two full turns of DNA, a linker
                     histone (H1 or H5) and a variable length of linker DNA;
                     H1/H5 are chromatin-associated...; cd00073"
                     /db_xref="CDD:238028"
     Site            order(58,70,101,115)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:238028"
     Site            96..107
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:238028"
     CDS             1..218
                     /gene="LOC121352704"
                     /coded_by="XM_041465883.1:203..859"
                     /db_xref="GeneID:121352704"
ORIGIN      
        1 msvdleetdl pmaeaeeapl spekkaaakk vkggggasls pskkrknnkk knqpgkysql
       61 vvetirklge rngsslakiy neakkvawfd qqngrtylky sikalvqndt llqvkgtgan
      121 gsfklnrkkl egggeggagn sahkslkkat vsstrraekp aakskkpekk shkkgaggaa
      181 akkdkgkakk ttkkgaaspg gkkvkksakp kalksrka
//
LOCUS       XP_041321827             395 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 71 [Pyrgilauda ruficollis].
ACCESSION   XP_041321827
VERSION     XP_041321827.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465893.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="coiled-coil domain-containing protein 71"
                     /calculated_mol_wt=42480
     Region          8..388
                     /region_name="CCDC71L"
                     /note="Coiled-coil domain-containing protein 71L;
                     pfam15374"
                     /db_xref="CDD:464682"
     CDS             1..395
                     /gene="CCDC71"
                     /coded_by="XM_041465893.1:189..1376"
                     /db_xref="GeneID:121352714"
ORIGIN      
        1 mniavnneee kavhswsris sagqkvleea lrvfnpmskd lsdtetqlva fiqglkeegy
       61 qptilrskdv ygyssctavt psqtetntqr ncasttqptq sparnsvakv aplptstpvs
      121 slkvssqpvs kgdsrnllls slkqtgsgts kaatvgfpts mypdvypamr lsvvlealvp
      181 lktatscles kctqgrlgis psdlkllkts ssprqfssgk ttkitkgkgy krlvkkapns
      241 asralkllrg pkggvlqesn ackasgvlng rvagsssqdc ttapqpktlk ikdkevlvgk
      301 tewkdsstcq egtgqkkrra teakeapqrk kantipvrkk trqaqsalnl lkfrtikvgn
      361 sssddevrrr aqkilrvnls pviqiqplsh shsvl
//
LOCUS       XP_041321836             395 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 71 [Pyrgilauda ruficollis].
ACCESSION   XP_041321836
VERSION     XP_041321836.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465902.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="coiled-coil domain-containing protein 71"
                     /calculated_mol_wt=42480
     Region          8..388
                     /region_name="CCDC71L"
                     /note="Coiled-coil domain-containing protein 71L;
                     pfam15374"
                     /db_xref="CDD:464682"
     CDS             1..395
                     /gene="CCDC71"
                     /coded_by="XM_041465902.1:202..1389"
                     /db_xref="GeneID:121352714"
ORIGIN      
        1 mniavnneee kavhswsris sagqkvleea lrvfnpmskd lsdtetqlva fiqglkeegy
       61 qptilrskdv ygyssctavt psqtetntqr ncasttqptq sparnsvakv aplptstpvs
      121 slkvssqpvs kgdsrnllls slkqtgsgts kaatvgfpts mypdvypamr lsvvlealvp
      181 lktatscles kctqgrlgis psdlkllkts ssprqfssgk ttkitkgkgy krlvkkapns
      241 asralkllrg pkggvlqesn ackasgvlng rvagsssqdc ttapqpktlk ikdkevlvgk
      301 tewkdsstcq egtgqkkrra teakeapqrk kantipvrkk trqaqsalnl lkfrtikvgn
      361 sssddevrrr aqkilrvnls pviqiqplsh shsvl
//
LOCUS       XP_041321848             357 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 8B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321848
VERSION     XP_041321848.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465914.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="kelch domain-containing protein 8B isoform X1"
                     /calculated_mol_wt=37318
     Region          <12..99
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          20..64
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          58..343
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          68..112
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          116..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          164..209
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          211..258
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          270..320
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..357
                     /gene="KLHDC8B"
                     /coded_by="XM_041465914.1:155..1228"
                     /db_xref="GeneID:121352724"
ORIGIN      
        1 maagagafaw atfpamptrr vycsaahrdg qlfvlggcgg ggralgtael ldlqaqrwat
       61 lpplptprag aavlalgkqi lvvggvdaaq splasvevyh vdegkwekka alaqpsmgis
      121 avqrdgavya lggmgadtsp qalvrvyepa kdhwqplpsm ptpcygasaf lqgnkifvlg
      181 grqgklpvta feafdletrn wtrypsvpsr rafaacamad gvvfslgglq qpgphnfysr
      241 phfvntvemf dpaqgvwrkp srtirmkekr adfvagclgg rvvavgglgn aggnqscpld
      301 svegfslsqk kweplppmpt grcscsscpa psllfiiggv aqgpsgavea lclrdvp
//
LOCUS       XP_041321849             357 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 8B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321849
VERSION     XP_041321849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="kelch domain-containing protein 8B isoform X1"
                     /calculated_mol_wt=37318
     Region          <12..99
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          20..64
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          58..343
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          68..112
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          116..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          164..209
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          211..258
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          270..320
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..357
                     /gene="KLHDC8B"
                     /coded_by="XM_041465915.1:142..1215"
                     /db_xref="GeneID:121352724"
ORIGIN      
        1 maagagafaw atfpamptrr vycsaahrdg qlfvlggcgg ggralgtael ldlqaqrwat
       61 lpplptprag aavlalgkqi lvvggvdaaq splasvevyh vdegkwekka alaqpsmgis
      121 avqrdgavya lggmgadtsp qalvrvyepa kdhwqplpsm ptpcygasaf lqgnkifvlg
      181 grqgklpvta feafdletrn wtrypsvpsr rafaacamad gvvfslgglq qpgphnfysr
      241 phfvntvemf dpaqgvwrkp srtirmkekr adfvagclgg rvvavgglgn aggnqscpld
      301 svegfslsqk kweplppmpt grcscsscpa psllfiiggv aqgpsgavea lclrdvp
//
LOCUS       XP_041321856             357 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 8B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321856
VERSION     XP_041321856.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465922.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="kelch domain-containing protein 8B isoform X1"
                     /calculated_mol_wt=37318
     Region          <12..99
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          20..64
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          58..343
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          68..112
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          116..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          164..209
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          211..258
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          270..320
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..357
                     /gene="KLHDC8B"
                     /coded_by="XM_041465922.1:228..1301"
                     /db_xref="GeneID:121352724"
ORIGIN      
        1 maagagafaw atfpamptrr vycsaahrdg qlfvlggcgg ggralgtael ldlqaqrwat
       61 lpplptprag aavlalgkqi lvvggvdaaq splasvevyh vdegkwekka alaqpsmgis
      121 avqrdgavya lggmgadtsp qalvrvyepa kdhwqplpsm ptpcygasaf lqgnkifvlg
      181 grqgklpvta feafdletrn wtrypsvpsr rafaacamad gvvfslgglq qpgphnfysr
      241 phfvntvemf dpaqgvwrkp srtirmkekr adfvagclgg rvvavgglgn aggnqscpld
      301 svegfslsqk kweplppmpt grcscsscpa psllfiiggv aqgpsgavea lclrdvp
//
LOCUS       XP_041321865             357 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 8B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321865
VERSION     XP_041321865.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465931.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="kelch domain-containing protein 8B isoform X1"
                     /calculated_mol_wt=37318
     Region          <12..99
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          20..64
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          58..343
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          68..112
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          116..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          164..209
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          211..258
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          270..320
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..357
                     /gene="KLHDC8B"
                     /coded_by="XM_041465931.1:220..1293"
                     /db_xref="GeneID:121352724"
ORIGIN      
        1 maagagafaw atfpamptrr vycsaahrdg qlfvlggcgg ggralgtael ldlqaqrwat
       61 lpplptprag aavlalgkqi lvvggvdaaq splasvevyh vdegkwekka alaqpsmgis
      121 avqrdgavya lggmgadtsp qalvrvyepa kdhwqplpsm ptpcygasaf lqgnkifvlg
      181 grqgklpvta feafdletrn wtrypsvpsr rafaacamad gvvfslgglq qpgphnfysr
      241 phfvntvemf dpaqgvwrkp srtirmkekr adfvagclgg rvvavgglgn aggnqscpld
      301 svegfslsqk kweplppmpt grcscsscpa psllfiiggv aqgpsgavea lclrdvp
//
LOCUS       XP_041321873             353 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 8B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321873
VERSION     XP_041321873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465939.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="kelch domain-containing protein 8B isoform X2"
                     /calculated_mol_wt=37019
     Region          <12..99
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          20..64
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          58..339
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          68..112
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          116..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          164..209
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          211..267
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          270..316
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..353
                     /gene="KLHDC8B"
                     /coded_by="XM_041465939.1:148..1209"
                     /db_xref="GeneID:121352724"
ORIGIN      
        1 maagagafaw atfpamptrr vycsaahrdg qlfvlggcgg ggralgtael ldlqaqrwat
       61 lpplptprag aavlalgkqi lvvggvdaaq splasvevyh vdegkwekka alaqpsmgis
      121 avqrdgavya lggmgadtsp qalvrvyepa kdhwqplpsm ptpcygasaf lqgnkifvlg
      181 grqgklpvta feafdletrn wtrypsvpsr rafaacamad gvvfslgglq qpgphnfysr
      241 phfvntvemf dpaqgvwrkp srtirmkekr adfvagclgg rvvavgglgn qscpldsveg
      301 fslsqkkwep lppmptgrcs csscpapsll fiiggvaqgp sgavealclr dvp
//
LOCUS       XP_041321881             357 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 8B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321881
VERSION     XP_041321881.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465947.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="kelch domain-containing protein 8B isoform X1"
                     /calculated_mol_wt=37318
     Region          <12..99
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          20..64
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          58..343
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          68..112
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          116..161
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          164..209
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          211..258
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          270..320
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..357
                     /gene="KLHDC8B"
                     /coded_by="XM_041465947.1:279..1352"
                     /db_xref="GeneID:121352724"
ORIGIN      
        1 maagagafaw atfpamptrr vycsaahrdg qlfvlggcgg ggralgtael ldlqaqrwat
       61 lpplptprag aavlalgkqi lvvggvdaaq splasvevyh vdegkwekka alaqpsmgis
      121 avqrdgavya lggmgadtsp qalvrvyepa kdhwqplpsm ptpcygasaf lqgnkifvlg
      181 grqgklpvta feafdletrn wtrypsvpsr rafaacamad gvvfslgglq qpgphnfysr
      241 phfvntvemf dpaqgvwrkp srtirmkekr adfvagclgg rvvavgglgn aggnqscpld
      301 svegfslsqk kweplppmpt grcscsscpa psllfiiggv aqgpsgavea lclrdvp
//
LOCUS       XP_041321894             346 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352758 [Pyrgilauda ruficollis].
ACCESSION   XP_041321894
VERSION     XP_041321894.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465960.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="uncharacterized protein LOC121352758"
                     /calculated_mol_wt=38979
     CDS             1..346
                     /gene="LOC121352758"
                     /coded_by="XM_041465960.1:9..1049"
                     /db_xref="GeneID:121352758"
ORIGIN      
        1 msggagrrrr lvlhvdlnnt vvvadtvtgq apraalntfl stvtwgrvga agewewvsdr
       61 pslrppcpga lsyysrhgrd pafteagpgr rfrdlharhl rllewpgrph dalsvpgepg
      121 kryhlilpsf frlldtlhrd grafavvfrt fgsdlpralq avssalrgqh pqfpalrdva
      181 lpvdltpgqi rcskkevvlt rgaerlatqe drrklynyfs sfegiggfqd hfdwwarnqf
      241 ssqggkplwv dphdpdvhhi fiddnirldd gdtivhpqvf seqgssnpks vptsalynic
      301 lvqtnlleai adedyfmhcv rrceenydry lacmekdtps qqwdgq
//
LOCUS       XP_041321906             729 aa            linear   VRT 06-MAY-2021
DEFINITION  acylamino-acid-releasing enzyme-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321906
VERSION     XP_041321906.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465972.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..729
                     /product="acylamino-acid-releasing enzyme-like"
                     /calculated_mol_wt=80625
     Region          <86..282
                     /region_name="APEH_N"
                     /note="Acylamino-acid-releasing enzyme, N-terminal domain;
                     pfam19283"
                     /db_xref="CDD:466026"
     Region          223..389
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          477..728
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     CDS             1..729
                     /gene="LOC121352763"
                     /coded_by="XM_041465972.1:48..2237"
                     /db_xref="GeneID:121352763"
ORIGIN      
        1 meppvqprae elselyrels qhpglsaacl gpdlttqygg kycslytews qrdlaraeni
       61 kfcrqylifh dgasivysgp agtcseikde llsrespsgm lkavlrkvpg kekekqflei
      121 wdqnrkvksi dltaldkhgs vydddqfgcl awshsethll yvaekkrpka esffqskape
      181 lgtsdedtgh pkkedapikg eqfvyhedwg etlstrsvpv lcvldiegns isvlegipeh
      241 lspgqafwsp edtgvvfvgw whdpfrlglr hctnrrsalf yvdltggrce llsedtkavw
      301 sprlspdgcr ivylennvlg phqqcsrlrm ydwytkhtst vleavprqaw gafpgiycga
      361 lpgmcwaads rrilldtaqr sqqdvfvvdt atgtttslta dspqgswsvl tisrdllvar
      421 fstpscppml kvavlpaagr eaqtqwiclq asppvpgisw girtlqpppe qehpqyggld
      481 fdailmrpse gpagqkpplv vmphggphsv ftagwmlypa alcrvgfavl lvnyrgslgf
      541 gqdsvaslpg nvgtqdvhdv qlcvervlqe etldasrval vggshggfla chligqfpdt
      601 yhacvvrnpv vniasmvttt dipdwcltet glpykpdalp dpaqwtemlh kspiryvdrv
      661 rapvllmlge ddrrvppkqg leyyralkar gvptrllwyp gnnhalagve aeadgfmnma
      721 lwllkhlqc
//
LOCUS       XP_041321919             399 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-dependent protein kinase type II-alpha regulatory subunit
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321919
VERSION     XP_041321919.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465985.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..399
                     /product="cAMP-dependent protein kinase type II-alpha
                     regulatory subunit"
                     /calculated_mol_wt=45100
     Region          3..43
                     /region_name="DD_RIIalpha_PKA"
                     /note="dimerization/docking (D/D) domain of the Type II
                     alpha Regulatory subunit of cAMP-dependent protein kinase;
                     cd12103"
                     /db_xref="CDD:438524"
     Site            order(3..7,9,12..13,16..17,20..21,24,27..30,32..33,36..37,
                     39..40)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:438524"
     Site            order(5,9..10,13..14,17..18,21..22)
                     /site_type="other"
                     /note="AKAP interaction site [polypeptide binding]"
                     /db_xref="CDD:438524"
     Region          135..248
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(203..204,213..215)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(235..237,241..243)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          257..377
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(332..333,342..344)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(364..366,370..372)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     CDS             1..399
                     /gene="PRKAR2A"
                     /coded_by="XM_041465985.1:1823..3022"
                     /db_xref="GeneID:121352770"
ORIGIN      
        1 msieippglt ellqgytvev lrhrpsdllg faaeyfarlr dardqeaggg rrvvsfdgep
       61 mqtesngdee pdrgddesds dfeppvvnry nrrvsvcaea fnpdeeeedt eqrvvhpktd
      121 eqrcrlqeac kdillfknld qeqlsqvlda mferkvkpqe hvidqgddgd nfyvvergly
      181 divvakdnqs rcvgrydnhg sfgelalmyn tpraativat tegalwgldr vtfrriilkn
      241 nakkrktyel fiesvpllks leasermkiv dvigekvyqd geriisqgdk adcfyivesg
      301 evkilikskt mtskeanqev eiarchrgqy fgelalvtnk praasayavg evkclvmdvq
      361 aferllgpcm dimkrnithy eeqlvamfgs smdlmdpgn
//
LOCUS       XP_041321932             168 aa            linear   VRT 06-MAY-2021
DEFINITION  hydroxyacyl-thioester dehydratase type 2, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321932
VERSION     XP_041321932.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465998.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="hydroxyacyl-thioester dehydratase type 2,
                     mitochondrial"
                     /calculated_mol_wt=18158
     Region          39..165
                     /region_name="R_hydratase"
                     /note="(R)-hydratase [(R)-specific enoyl-CoA hydratase]
                     catalyzes the hydration of trans-2-enoyl CoA to
                     (R)-3-hydroxyacyl-CoA as part of the PHA
                     (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase
                     contains a hot-dog fold similar to those of
                     thioesterase...; cd03449"
                     /db_xref="CDD:239533"
     Site            order(49,51,59,61..62,64..66,93,96..97,108..109,111..113,
                     115,117)
                     /site_type="other"
                     /note="dimer interaction site [polypeptide binding]"
                     /db_xref="CDD:239533"
     Site            order(59,65,67,70,87,89,92,95,99,110,113,115,117,131,145,
                     147,157,163)
                     /site_type="active"
                     /note="substrate-binding tunnel [active]"
                     /db_xref="CDD:239533"
     Site            order(60,65,67,70,85,88..89)
                     /site_type="active"
                     /db_xref="CDD:239533"
     Site            order(65,67,70,88)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:239533"
     Site            order(96,99,108,110)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239533"
     CDS             1..168
                     /gene="HTD2"
                     /coded_by="XM_041465998.1:1..507"
                     /db_xref="GeneID:121352776"
ORIGIN      
        1 mlwpfrrgis ggifqqgalt kptffnsllg hpvfqnlhik vgdkaelska ftqndvvtfs
       61 yltgdtnplh lneefakksr fgrtvvhgvl inglisavlg tkmpgqgcif lsqeirfpap
      121 lyvgeevtaa aevkrlkgsv ahisvscqvr esgktvmegm vkvmvpeg
//
LOCUS       XP_041321946             122 aa            linear   VRT 06-MAY-2021
DEFINITION  ribonuclease P protein subunit p14 [Pyrgilauda ruficollis].
ACCESSION   XP_041321946
VERSION     XP_041321946.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466012.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..122
                     /product="ribonuclease P protein subunit p14"
                     /calculated_mol_wt=13349
     Region          19..106
                     /region_name="RNase_P_Rpp14"
                     /note="Rpp14/Pop5 family; pfam01900"
                     /db_xref="CDD:460379"
     CDS             1..122
                     /gene="RPP14"
                     /coded_by="XM_041466012.1:1236..1604"
                     /db_xref="GeneID:121352782"
ORIGIN      
        1 maaaaferrv lrcaaehhyl rvrlelpdgg arpnaaqfkq lvvtalrelh geagaalpfd
       61 vltyeektls ailrvissgl vklwsaltll gfyqsrrcaf rvlqaspfll alsgnsrelv
      121 ld
//
LOCUS       XP_041321959             545 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321959
VERSION     XP_041321959.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466025.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..545
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..545
                     /product="microphthalmia-associated transcription factor
                     isoform X1"
                     /calculated_mol_wt=61174
     Region          75..213
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          319..422
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(335..336,338..339,342..343,347,368..369)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(345..346,349..350,352,356,369,373..374,377,379..381,
                     383..384,386..387,390,393..395)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          416..541
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..545
                     /gene="MITF"
                     /coded_by="XM_041466025.1:97..1734"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mscflemsvd prlepeqrhl eqmfqvdree ieelilkenn weyeegyrka svqfsnsehp
       61 gaskpplsss smtsrillrq qlmreqmqeq erreqqqkqq aaqfmqqrvp vsqtpainvs
      121 vptslppatq vpmevlkvqt hlenptkyhi qqaqrqqvkq ylsttlankh anqalslpcp
      181 nqpgdhvmpp gtgssapnsp mamltlnsnc ekegfykfee qsrvesecpa lnthsrascm
      241 qmddviddii slessyneei lglvdpalqm antlpvsgnl idlygnqsmp ppglnisnsc
      301 panlpnikre ltacifptes earalakerq kkdnhnlier rrrfnindri kelgtlipks
      361 ndpdmrwnkg tilkasvdyi rklqreqqrt kelenrqkkl ehanrhlllr iqelemqara
      421 hglslvpstg lcspdmvnrv ikqepvldnc sqemmphhtd lsctttldlt dgtitfsdnl
      481 gnvtepagty gvpakmgskl edilmddtls pvgvtdplls svspgaskts srrssvsmed
      541 tdhac
//
LOCUS       XP_041321967             539 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321967
VERSION     XP_041321967.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466033.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..539
                     /product="microphthalmia-associated transcription factor
                     isoform X2"
                     /calculated_mol_wt=60542
     Region          75..213
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          313..416
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(329..330,332..333,336..337,341,362..363)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(339..340,343..344,346,350,363,367..368,371,373..375,
                     377..378,380..381,384,387..389)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          410..535
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..539
                     /gene="MITF"
                     /coded_by="XM_041466033.1:93..1712"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mscflemsvd prlepeqrhl eqmfqvdree ieelilkenn weyeegyrka svqfsnsehp
       61 gaskpplsss smtsrillrq qlmreqmqeq erreqqqkqq aaqfmqqrvp vsqtpainvs
      121 vptslppatq vpmevlkvqt hlenptkyhi qqaqrqqvkq ylsttlankh anqalslpcp
      181 nqpgdhvmpp gtgssapnsp mamltlnsnc ekegfykfee qsrvesecpa lnthsrascm
      241 qmddviddii slessyneei lglvdpalqm antlpvsgnl idlygnqsmp ppglnisnsc
      301 panlpnikre ltesearala kerqkkdnhn lierrrrfni ndrikelgtl ipksndpdmr
      361 wnkgtilkas vdyirklqre qqrtkelenr qkklehanrh lllriqelem qarahglslv
      421 pstglcspdm vnrvikqepv ldncsqemmp hhtdlscttt ldltdgtitf sdnlgnvtep
      481 agtygvpakm gskledilmd dtlspvgvtd pllssvspga sktssrrssv smedtdhac
//
LOCUS       XP_041321976             525 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321976
VERSION     XP_041321976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..525
                     /product="microphthalmia-associated transcription factor
                     isoform X3"
                     /calculated_mol_wt=58437
     Region          55..193
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          299..402
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(315..316,318..319,322..323,327,348..349)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(325..326,329..330,332,336,349,353..354,357,359..361,
                     363..364,366..367,370,373..375)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          396..521
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..525
                     /gene="MITF"
                     /coded_by="XM_041466042.1:199..1776"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mqaesgivpd fevgeefhee pktyyelksq plkssnsehp gaskpplsss smtsrillrq
       61 qlmreqmqeq erreqqqkqq aaqfmqqrvp vsqtpainvs vptslppatq vpmevlkvqt
      121 hlenptkyhi qqaqrqqvkq ylsttlankh anqalslpcp nqpgdhvmpp gtgssapnsp
      181 mamltlnsnc ekegfykfee qsrvesecpa lnthsrascm qmddviddii slessyneei
      241 lglvdpalqm antlpvsgnl idlygnqsmp ppglnisnsc panlpnikre ltacifptes
      301 earalakerq kkdnhnlier rrrfnindri kelgtlipks ndpdmrwnkg tilkasvdyi
      361 rklqreqqrt kelenrqkkl ehanrhlllr iqelemqara hglslvpstg lcspdmvnrv
      421 ikqepvldnc sqemmphhtd lsctttldlt dgtitfsdnl gnvtepagty gvpakmgskl
      481 edilmddtls pvgvtdplls svspgaskts srrssvsmed tdhac
//
LOCUS       XP_041321983             519 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321983
VERSION     XP_041321983.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466049.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..519
                     /product="microphthalmia-associated transcription factor
                     isoform X4"
                     /calculated_mol_wt=57805
     Region          55..193
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          293..396
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(309..310,312..313,316..317,321,342..343)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(319..320,323..324,326,330,343,347..348,351,353..355,
                     357..358,360..361,364,367..369)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          390..515
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..519
                     /gene="MITF"
                     /coded_by="XM_041466049.1:198..1757"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mqaesgivpd fevgeefhee pktyyelksq plkssnsehp gaskpplsss smtsrillrq
       61 qlmreqmqeq erreqqqkqq aaqfmqqrvp vsqtpainvs vptslppatq vpmevlkvqt
      121 hlenptkyhi qqaqrqqvkq ylsttlankh anqalslpcp nqpgdhvmpp gtgssapnsp
      181 mamltlnsnc ekegfykfee qsrvesecpa lnthsrascm qmddviddii slessyneei
      241 lglvdpalqm antlpvsgnl idlygnqsmp ppglnisnsc panlpnikre ltesearala
      301 kerqkkdnhn lierrrrfni ndrikelgtl ipksndpdmr wnkgtilkas vdyirklqre
      361 qqrtkelenr qkklehanrh lllriqelem qarahglslv pstglcspdm vnrvikqepv
      421 ldncsqemmp hhtdlscttt ldltdgtitf sdnlgnvtep agtygvpakm gskledilmd
      481 dtlspvgvtd pllssvspga sktssrrssv smedtdhac
//
LOCUS       XP_041321994             517 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321994
VERSION     XP_041321994.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466060.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="microphthalmia-associated transcription factor
                     isoform X5"
                     /calculated_mol_wt=57957
     Region          75..219
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          291..394
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(307..308,310..311,314..315,319,340..341)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(317..318,321..322,324,328,341,345..346,349,351..353,
                     355..356,358..359,362,365..367)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          388..513
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..517
                     /gene="MITF"
                     /coded_by="XM_041466060.1:101..1654"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mscflemsvd prlepeqrhl eqmfqvdree ieelilkenn weyeegyrka svqfsnsehp
       61 gaskpplsss smtsrillrq qlmreqmqeq erreqqqkqq aaqfmqqrvp vsqtpainvs
      121 vptslppatq vpmevlkvqt hlenptkyhi qqaqrqqvkq ylsttlankh anqalslpcp
      181 nqpgdhvmpp gtgssapnsp mamltlnsnc ekemddvidd iislessyne eilglvdpal
      241 qmantlpvsg nlidlygnqs mpppglnisn scpanlpnik reltacifpt esearalake
      301 rqkkdnhnli errrrfnind rikelgtlip ksndpdmrwn kgtilkasvd yirklqreqq
      361 rtkelenrqk klehanrhll lriqelemqa rahglslvps tglcspdmvn rvikqepvld
      421 ncsqemmphh tdlsctttld ltdgtitfsd nlgnvtepag tygvpakmgs kledilmddt
      481 lspvgvtdpl lssvspgask tssrrssvsm edtdhac
//
LOCUS       XP_041322005             511 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322005
VERSION     XP_041322005.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466071.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="microphthalmia-associated transcription factor
                     isoform X6"
                     /calculated_mol_wt=57324
     Region          75..219
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          285..388
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(301..302,304..305,308..309,313,334..335)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(311..312,315..316,318,322,335,339..340,343,345..347,
                     349..350,352..353,356,359..361)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          382..507
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..511
                     /gene="MITF"
                     /coded_by="XM_041466071.1:96..1631"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mscflemsvd prlepeqrhl eqmfqvdree ieelilkenn weyeegyrka svqfsnsehp
       61 gaskpplsss smtsrillrq qlmreqmqeq erreqqqkqq aaqfmqqrvp vsqtpainvs
      121 vptslppatq vpmevlkvqt hlenptkyhi qqaqrqqvkq ylsttlankh anqalslpcp
      181 nqpgdhvmpp gtgssapnsp mamltlnsnc ekemddvidd iislessyne eilglvdpal
      241 qmantlpvsg nlidlygnqs mpppglnisn scpanlpnik relteseara lakerqkkdn
      301 hnlierrrrf nindrikelg tlipksndpd mrwnkgtilk asvdyirklq reqqrtkele
      361 nrqkklehan rhlllriqel emqarahgls lvpstglcsp dmvnrvikqe pvldncsqem
      421 mphhtdlsct ttldltdgti tfsdnlgnvt epagtygvpa kmgskledil mddtlspvgv
      481 tdpllssvsp gasktssrrs svsmedtdha c
//
LOCUS       XP_041322012             491 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322012
VERSION     XP_041322012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="microphthalmia-associated transcription factor
                     isoform X7"
                     /calculated_mol_wt=54587
     Region          55..199
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          265..368
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(281..282,284..285,288..289,293,314..315)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(291..292,295..296,298,302,315,319..320,323,325..327,
                     329..330,332..333,336,339..341)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          362..487
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..491
                     /gene="MITF"
                     /coded_by="XM_041466078.1:199..1674"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mqaesgivpd fevgeefhee pktyyelksq plkssnsehp gaskpplsss smtsrillrq
       61 qlmreqmqeq erreqqqkqq aaqfmqqrvp vsqtpainvs vptslppatq vpmevlkvqt
      121 hlenptkyhi qqaqrqqvkq ylsttlankh anqalslpcp nqpgdhvmpp gtgssapnsp
      181 mamltlnsnc ekemddvidd iislessyne eilglvdpal qmantlpvsg nlidlygnqs
      241 mpppglnisn scpanlpnik relteseara lakerqkkdn hnlierrrrf nindrikelg
      301 tlipksndpd mrwnkgtilk asvdyirklq reqqrtkele nrqkklehan rhlllriqel
      361 emqarahgls lvpstglcsp dmvnrvikqe pvldncsqem mphhtdlsct ttldltdgti
      421 tfsdnlgnvt epagtygvpa kmgskledil mddtlspvgv tdpllssvsp gasktssrrs
      481 svsmedtdha c
//
LOCUS       XP_041322018             474 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322018
VERSION     XP_041322018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="microphthalmia-associated transcription factor
                     isoform X8"
                     /calculated_mol_wt=52861
     Region          4..142
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          248..351
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(264..265,267..268,271..272,276,297..298)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(274..275,278..279,281,285,298,302..303,306,308..310,
                     312..313,315..316,319,322..324)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          345..470
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..474
                     /gene="MITF"
                     /coded_by="XM_041466084.1:1161..2585"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mtsrillrqq lmreqmqeqe rreqqqkqqa aqfmqqrvpv sqtpainvsv ptslppatqv
       61 pmevlkvqth lenptkyhiq qaqrqqvkqy lsttlankha nqalslpcpn qpgdhvmppg
      121 tgssapnspm amltlnsnce kegfykfeeq srvesecpal nthsrascmq mddviddiis
      181 lessyneeil glvdpalqma ntlpvsgnli dlygnqsmpp pglnisnscp anlpnikrel
      241 tacifptese aralakerqk kdnhnlierr rrfnindrik elgtlipksn dpdmrwnkgt
      301 ilkasvdyir klqreqqrtk elenrqkkle hanrhlllri qelemqarah glslvpstgl
      361 cspdmvnrvi kqepvldncs qemmphhtdl sctttldltd gtitfsdnlg nvtepagtyg
      421 vpakmgskle dilmddtlsp vgvtdpllss vspgasktss rrssvsmedt dhac
//
LOCUS       XP_041322026             474 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322026
VERSION     XP_041322026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="microphthalmia-associated transcription factor
                     isoform X8"
                     /calculated_mol_wt=52861
     Region          4..142
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          248..351
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(264..265,267..268,271..272,276,297..298)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(274..275,278..279,281,285,298,302..303,306,308..310,
                     312..313,315..316,319,322..324)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          345..470
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..474
                     /gene="MITF"
                     /coded_by="XM_041466092.1:224..1648"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mtsrillrqq lmreqmqeqe rreqqqkqqa aqfmqqrvpv sqtpainvsv ptslppatqv
       61 pmevlkvqth lenptkyhiq qaqrqqvkqy lsttlankha nqalslpcpn qpgdhvmppg
      121 tgssapnspm amltlnsnce kegfykfeeq srvesecpal nthsrascmq mddviddiis
      181 lessyneeil glvdpalqma ntlpvsgnli dlygnqsmpp pglnisnscp anlpnikrel
      241 tacifptese aralakerqk kdnhnlierr rrfnindrik elgtlipksn dpdmrwnkgt
      301 ilkasvdyir klqreqqrtk elenrqkkle hanrhlllri qelemqarah glslvpstgl
      361 cspdmvnrvi kqepvldncs qemmphhtdl sctttldltd gtitfsdnlg nvtepagtyg
      421 vpakmgskle dilmddtlsp vgvtdpllss vspgasktss rrssvsmedt dhac
//
LOCUS       XP_041322034             474 aa            linear   VRT 06-MAY-2021
DEFINITION  microphthalmia-associated transcription factor isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322034
VERSION     XP_041322034.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466100.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="microphthalmia-associated transcription factor
                     isoform X8"
                     /calculated_mol_wt=52861
     Region          4..142
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          248..351
                     /region_name="bHLHzip_MITF"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in microphthalmia-associated transcription factor
                     (MITF) and similar proteins; cd18926"
                     /db_xref="CDD:381496"
     Site            order(264..265,267..268,271..272,276,297..298)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381496"
     Site            order(274..275,278..279,281,285,298,302..303,306,308..310,
                     312..313,315..316,319,322..324)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381496"
     Region          345..470
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..474
                     /gene="MITF"
                     /coded_by="XM_041466100.1:74..1498"
                     /db_xref="GeneID:121352789"
ORIGIN      
        1 mtsrillrqq lmreqmqeqe rreqqqkqqa aqfmqqrvpv sqtpainvsv ptslppatqv
       61 pmevlkvqth lenptkyhiq qaqrqqvkqy lsttlankha nqalslpcpn qpgdhvmppg
      121 tgssapnspm amltlnsnce kegfykfeeq srvesecpal nthsrascmq mddviddiis
      181 lessyneeil glvdpalqma ntlpvsgnli dlygnqsmpp pglnisnscp anlpnikrel
      241 tacifptese aralakerqk kdnhnlierr rrfnindrik elgtlipksn dpdmrwnkgt
      301 ilkasvdyir klqreqqrtk elenrqkkle hanrhlllri qelemqarah glslvpstgl
      361 cspdmvnrvi kqepvldncs qemmphhtdl sctttldltd gtitfsdnlg nvtepagtyg
      421 vpakmgskle dilmddtlsp vgvtdpllss vspgasktss rrssvsmedt dhac
//
LOCUS       XP_041322055             380 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor 27 [Pyrgilauda ruficollis].
ACCESSION   XP_041322055
VERSION     XP_041322055.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466121.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="probable G-protein coupled receptor 27"
                     /calculated_mol_wt=42191
     Region          26..354
                     /region_name="7tmA_SREB-like"
                     /note="super conserved receptor expressed in brain and
                     related proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15005"
                     /db_xref="CDD:320134"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320134"
     Region          60..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320134"
     Site            order(82,85..86,99..104,106..107,110,155,157..161,184,
                     187..189,191..193,195..196,302,305..306,308..309,312,
                     321..322,324..326,329,332..333)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320134"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320134"
     Region          143..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320134"
     Region          184..213
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320134"
     Region          282..312
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320134"
     Region          322..347
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320134"
     CDS             1..380
                     /gene="GPR27"
                     /coded_by="XM_041466121.1:42..1184"
                     /db_xref="GeneID:121352840"
ORIGIN      
        1 mansselgss ssphlpsagg llsasglkla tlglilcvsl agnvlfawli lkdrhlhrap
       61 yyllldlcla dglrslacfp fvmlsvrsga awphgplsck vlaflavlfc fhaafllfcv
      121 gvtrymaiah hrfyakrmtg wtclavvcmv wtlsmamafp pvfdvgtykf ireeeqcife
      181 hryvkandtl gfmlmlaavi aathlvyikl lffihghrkm kpaqlvpais qnwtfhgpga
      241 tgqaaanwta gfgrgptppt lvgirqaths qikrllvlee fkmekrlckm fymitllfll
      301 lwspyivacy lrvfikassi pqvylttsvw mtfaqagvnp ilcfifnkel rvclrahfpc
      361 cqsiqstqgt ilcdlksfgm
//
LOCUS       XP_041322067             405 aa            linear   VRT 06-MAY-2021
DEFINITION  POC1 centriolar protein homolog A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322067
VERSION     XP_041322067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="POC1 centriolar protein homolog A isoform X1"
                     /calculated_mol_wt=44971
     Region          6..319
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          22..59
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          65..101
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          106..142
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..183
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          190..226
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..268
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..405
                     /gene="POC1A"
                     /coded_by="XM_041466133.1:40..1257"
                     /db_xref="GeneID:121352848"
ORIGIN      
        1 maavceedps lerhfkghrd avtsvdfsra kkqlvsgsmd sclmiwsmkp qmrayrflgh
       61 kdavlcvqfs psghlvasgs rdktvrlwip sakgestvfk ahtgtvrsvh fssdgqslvt
      121 asddktikvw tvhrqkflfs lsqhinwvrc arfspdgrli vsssddktvk lwdktsreci
      181 hsfcehggfv nhvdfnpsgn ciaaggtdst vklwdvrmnr llqhyqvhss vvnslsfhps
      241 gnylitasnd stlkildlle grllytlhgh qgpatcvafs rngdlfasgg sdeqvmvwkt
      301 nfdadygdav kpqkhsssve gthgtgqsem dggihhkktk tqdsvrtheq qeeetsiant
      361 lehimgqldv ltqtvsileq rltltedklk ecletqqkii qnktn
//
LOCUS       XP_041322077             405 aa            linear   VRT 06-MAY-2021
DEFINITION  POC1 centriolar protein homolog A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322077
VERSION     XP_041322077.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466143.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="POC1 centriolar protein homolog A isoform X1"
                     /calculated_mol_wt=44971
     Region          6..319
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          22..59
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          65..101
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          106..142
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..183
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          190..226
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..268
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..405
                     /gene="POC1A"
                     /coded_by="XM_041466143.1:40..1257"
                     /db_xref="GeneID:121352848"
ORIGIN      
        1 maavceedps lerhfkghrd avtsvdfsra kkqlvsgsmd sclmiwsmkp qmrayrflgh
       61 kdavlcvqfs psghlvasgs rdktvrlwip sakgestvfk ahtgtvrsvh fssdgqslvt
      121 asddktikvw tvhrqkflfs lsqhinwvrc arfspdgrli vsssddktvk lwdktsreci
      181 hsfcehggfv nhvdfnpsgn ciaaggtdst vklwdvrmnr llqhyqvhss vvnslsfhps
      241 gnylitasnd stlkildlle grllytlhgh qgpatcvafs rngdlfasgg sdeqvmvwkt
      301 nfdadygdav kpqkhsssve gthgtgqsem dggihhkktk tqdsvrtheq qeeetsiant
      361 lehimgqldv ltqtvsileq rltltedklk ecletqqkii qnktn
//
LOCUS       XP_041322086             404 aa            linear   VRT 06-MAY-2021
DEFINITION  POC1 centriolar protein homolog A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322086
VERSION     XP_041322086.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466152.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="POC1 centriolar protein homolog A isoform X2"
                     /calculated_mol_wt=44843
     Region          6..319
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          22..59
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          65..101
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          106..142
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          149..183
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          190..226
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..268
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..404
                     /gene="POC1A"
                     /coded_by="XM_041466152.1:40..1254"
                     /db_xref="GeneID:121352848"
ORIGIN      
        1 maavceedps lerhfkghrd avtsvdfsra kkqlvsgsmd sclmiwsmkp qmrayrflgh
       61 kdavlcvqfs psghlvasgs rdktvrlwip sakgestvfk ahtgtvrsvh fssdgqslvt
      121 asddktikvw tvhrqkflfs lsqhinwvrc arfspdgrli vsssddktvk lwdktsreci
      181 hsfcehggfv nhvdfnpsgn ciaaggtdst vklwdvrmnr llqhyqvhss vvnslsfhps
      241 gnylitasnd stlkildlle grllytlhgh qgpatcvafs rngdlfasgg sdeqvmvwkt
      301 nfdadygdav kpqkhsssve gthgtgsemd ggihhkktkt qdsvrtheqq eeetsiantl
      361 ehimgqldvl tqtvsileqr ltltedklke cletqqkiiq nktn
//
LOCUS       XP_041322097             345 aa            linear   VRT 06-MAY-2021
DEFINITION  POC1 centriolar protein homolog A isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322097
VERSION     XP_041322097.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466163.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..345
                     /product="POC1 centriolar protein homolog A isoform X3"
                     /calculated_mol_wt=38172
     Region          <7..241
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          23..59
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          64..90
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          92..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          130..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          215..238
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..345
                     /gene="POC1A"
                     /coded_by="XM_041466163.1:40..1077"
                     /db_xref="GeneID:121352848"
ORIGIN      
        1 maavceedps lerhfkghrd avtsvdfsra kkqlvsgsmd sclmiwsmkp qmrayrflgh
       61 kdavlcvqfs psghlvasgs rdktvrlwip safspdgrli vsssddktvk lwdktsreci
      121 hsfcehggfv nhvdfnpsgn ciaaggtdst vklwdvrmnr llqhyqvhss vvnslsfhps
      181 gnylitasnd stlkildlle grllytlhgh qgpatcvafs rngdlfasgg sdeqvmvwkt
      241 nfdadygdav kpqkhsssve gthgtgqsem dggihhkktk tqdsvrtheq qeeetsiant
      301 lehimgqldv ltqtvsileq rltltedklk ecletqqkii qnktn
//
LOCUS       XP_041322107             548 aa            linear   VRT 06-MAY-2021
DEFINITION  POC1 centriolar protein homolog A isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322107
VERSION     XP_041322107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..548
                     /product="POC1 centriolar protein homolog A isoform X4"
                     /calculated_mol_wt=61170
     Region          59..>132
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          151..463
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          166..203
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          209..245
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          250..286
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          293..327
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          334..370
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..412
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          419..442
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..548
                     /gene="POC1A"
                     /coded_by="XM_041466173.1:302..1948"
                     /db_xref="GeneID:121352848"
ORIGIN      
        1 maapglpgqg givpcdtamq amedeqdvws crdrhrtkra pavssestgk dnrflplcfp
       61 eklwkmlesd qfqsiwwseg gkcvainkdl fevevlgrgv cqrvfntqhi rsvirqlnly
      121 gftkvqrdfq rsaslpefls eeaatsahsq edpslerhfk ghrdavtsvd fsrakkqlvs
      181 gsmdsclmiw smkpqmrayr flghkdavlc vqfspsghlv asgsrdktvr lwipsakges
      241 tvfkahtgtv rsvhfssdgq slvtasddkt ikvwtvhrqk flfslsqhin wvrcarfspd
      301 grlivsssdd ktvklwdkts recihsfceh ggfvnhvdfn psgnciaagg tdstvklwdv
      361 rmnrllqhyq vhssvvnsls fhpsgnylit asndstlkil dllegrllyt lhghqgpatc
      421 vafsrngdlf asggsdeqvm vwktnfdady gdavkpqkhs ssvegthgtg semdggihhk
      481 ktktqdsvrt heqqeeetsi antlehimgq ldvltqtvsi leqrltlted klkecletqq
      541 kiiqnktn
//
LOCUS       XP_041322121             636 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronidase-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322121
VERSION     XP_041322121.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466187.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..636
                     /product="hyaluronidase-2 isoform X1"
                     /calculated_mol_wt=70078
     Region          191..524
                     /region_name="Glyco_hydro_56"
                     /note="Hyaluronidase; pfam01630"
                     /db_xref="CDD:460272"
     CDS             1..636
                     /gene="HYAL2"
                     /coded_by="XM_041466187.1:16..1926"
                     /db_xref="GeneID:121352862"
ORIGIN      
        1 mvgaaspaws grgagagpap prvvragrfk sggggaaavl eepaagdglr rgesragsgs
       61 gagppgaapr rfvcpartka aprrqpgehe rakplgtgip esqpsagals appgsslpre
      121 gtrirvrfgg cgqsgsclhp llpapfltlf srrpqvlsgr mrggcaaava vpwlallala
      181 rqppekpsaa phltrrpflv awnvptqdck prfqvsfdfs ifdlyaspne gfvgqnltif
      241 ykerlglypy ythqgvavng gvpqnsslse hlarlqdgid kyirsstkeg lavidweewr
      301 pvwarnwkpk diyreasqel vlqrqptwpp ekvnkqaafe fesaaqefmv ktlrkaksfr
      361 pkqlwgfylf pdcynhdynk nkesytgqcp dveksrndql kwlwkesmal ypsiyldpll
      421 dstpnsrkfv rarvmeamri sqkhhddysl pvfvytrpty irklnvlsqa dlistigesa
      481 algaagailw gdavdtrnre lcqfmknyle gdlgryivnv taaaelcstt lcqgrgrclr
      541 qdshadvflh lnstnfqlrr rdadhperpl fwaegqlssa dilflrthfh chcyqgwqgs
      601 gcqtragprs dapgplaplg lgvllllasw cyppld
//
LOCUS       XP_041322130             476 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronidase-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322130
VERSION     XP_041322130.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466196.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="hyaluronidase-2 isoform X2"
                     /calculated_mol_wt=54126
     Region          31..364
                     /region_name="Glyco_hydro_56"
                     /note="Hyaluronidase; pfam01630"
                     /db_xref="CDD:460272"
     CDS             1..476
                     /gene="HYAL2"
                     /coded_by="XM_041466196.1:61..1491"
                     /db_xref="GeneID:121352862"
ORIGIN      
        1 mrggcaaava vpwlallala rqppekpsaa phltrrpflv awnvptqdck prfqvsfdfs
       61 ifdlyaspne gfvgqnltif ykerlglypy ythqgvavng gvpqnsslse hlarlqdgid
      121 kyirsstkeg lavidweewr pvwarnwkpk diyreasqel vlqrqptwpp ekvnkqaafe
      181 fesaaqefmv ktlrkaksfr pkqlwgfylf pdcynhdynk nkesytgqcp dveksrndql
      241 kwlwkesmal ypsiyldpll dstpnsrkfv rarvmeamri sqkhhddysl pvfvytrpty
      301 irklnvlsqa dlistigesa algaagailw gdavdtrnre lcqfmknyle gdlgryivnv
      361 taaaelcstt lcqgrgrclr qdshadvflh lnstnfqlrr rdadhperpl fwaegqlssa
      421 dilflrthfh chcyqgwqgs gcqtragprs dapgplaplg lgvllllasw cyppld
//
LOCUS       XP_041322138             476 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronidase-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322138
VERSION     XP_041322138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466204.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="hyaluronidase-2 isoform X2"
                     /calculated_mol_wt=54126
     Region          31..364
                     /region_name="Glyco_hydro_56"
                     /note="Hyaluronidase; pfam01630"
                     /db_xref="CDD:460272"
     CDS             1..476
                     /gene="HYAL2"
                     /coded_by="XM_041466204.1:126..1556"
                     /db_xref="GeneID:121352862"
ORIGIN      
        1 mrggcaaava vpwlallala rqppekpsaa phltrrpflv awnvptqdck prfqvsfdfs
       61 ifdlyaspne gfvgqnltif ykerlglypy ythqgvavng gvpqnsslse hlarlqdgid
      121 kyirsstkeg lavidweewr pvwarnwkpk diyreasqel vlqrqptwpp ekvnkqaafe
      181 fesaaqefmv ktlrkaksfr pkqlwgfylf pdcynhdynk nkesytgqcp dveksrndql
      241 kwlwkesmal ypsiyldpll dstpnsrkfv rarvmeamri sqkhhddysl pvfvytrpty
      301 irklnvlsqa dlistigesa algaagailw gdavdtrnre lcqfmknyle gdlgryivnv
      361 taaaelcstt lcqgrgrclr qdshadvflh lnstnfqlrr rdadhperpl fwaegqlssa
      421 dilflrthfh chcyqgwqgs gcqtragprs dapgplaplg lgvllllasw cyppld
//
LOCUS       XP_041322150             435 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronidase-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322150
VERSION     XP_041322150.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466216.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..435
                     /product="hyaluronidase-1"
                     /calculated_mol_wt=49189
     Region          25..355
                     /region_name="Glyco_hydro_56"
                     /note="Hyaluronidase; pfam01630"
                     /db_xref="CDD:460272"
     CDS             1..435
                     /gene="HYAL1"
                     /coded_by="XM_041466216.1:853..2160"
                     /db_xref="GeneID:121352879"
ORIGIN      
        1 masawscwlp llllpaltha ggpgpvlvnr pfvtiwnipt ercaemynvt lslevfdvla
       61 ndqqsftgqd itlfysdkig lfpyytsegv pvngglpqna sleahirqat qdikvtlpsp
      121 dysglavidw ekwrplwirn wdsmeiyqqk seelvqqqhp qwppkeveem akqqfektac
      181 dfmnktlwlg eslrpsaywg fygfpdcynn hfdslhyngt cpdveqqrnk nlswlwrssr
      241 alypsiylpl clngtnkvla yvrhrvaeaf avqqgildsa ipvlpysqia fertldflsq
      301 edlmntiges aaqgaagiil wgsldysask emclrlkdyv egplghyivn vtasadlcsq
      361 slcsgqgrcv rldkqqgylh ldpsrftidl ragkpwleaq slepgedisk lakefscqcy
      421 dkwqgprcdi qvfak
//
LOCUS       XP_041322162             895 aa            linear   VRT 06-MAY-2021
DEFINITION  prickle-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322162
VERSION     XP_041322162.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466228.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..895
                     /product="prickle-like protein 2 isoform X1"
                     /calculated_mol_wt=101169
     Region          82..178
                     /region_name="PET_Prickle"
                     /note="The PET domain of Prickle; cd09827"
                     /db_xref="CDD:193602"
     Region          186..244
                     /region_name="LIM1_Prickle"
                     /note="The first LIM domain of Prickle; cd09415"
                     /db_xref="CDD:188799"
     Site            order(186,189,212,215,218,221,239,242)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188799"
     Region          249..304
                     /region_name="LIM2_Prickle"
                     /note="The second LIM domain of Prickle; cd09418"
                     /db_xref="CDD:188802"
     Site            order(251,254,272,275,278,281,299,302)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188802"
     Region          309..367
                     /region_name="LIM3_Prickle"
                     /note="The third LIM domain of Prickle; cd09420"
                     /db_xref="CDD:188804"
     Site            order(311,314,333,338,341,344,362,366)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188804"
     CDS             1..895
                     /gene="PRICKLE2"
                     /coded_by="XM_041466228.1:69..2756"
                     /db_xref="GeneID:121352886"
ORIGIN      
        1 mfgrgsrkrl ssrsltasge pergqpcntc gdqcpgfalh kwrkiclhck csqeehivtv
       61 mplemektvt klmfdfqrns tsdddsgcal eeyawvppgl kpeqvhqyys clpedkvpyv
      121 nspgeksrik qllhqlpphd nevrycnsld eeekrelklf snqrkrenlg rgnvrpfpvt
      181 mtgaiceqcg gqinggdmav fasraghgvc whppcficsv cnellvdliy fyqdgkiycg
      241 rhhaeclkpr caacdeiifa decteaegrh whmkhfccfe cetvlggqry imkdgrpycc
      301 scfeslyaey cdtcaqhigi dqgqmtydgq hwhatetcfc caqckksllg rpflpkqgqi
      361 fcsracsigd dpngsdssds afqsarakes rrsakigknk gkgeegarsp cnqlqvtsnr
      421 lstdvdplsl qmdllslasq tpslnrdhlw rsrdelyhyg gkmeqsqsqt plqllsqcni
      481 rtsynptqvp gsqsdlwakh fsnqkrsssl amkshggsfi qdcredyysg rlrsqesysd
      541 msnqsfpetr gsvkvpkyee eeeggmpasq crtrhpinal kftedltpte qtprgsmesl
      601 alsnatglsa dggakrqehl srfsmpdlsk dsgmnvsekm snmgtlnssm qfrsaesvrs
      661 llsvqqyqdm eptlhdlasp lgyqerpahg rmhqsfdygs gvpggklgaq eiprhtpmse
      721 rtrrrtvlrd ddrhyrphrp rrsrrsrsdn alhlaseqcy rlkerpslra rddydpfvhq
      781 rscretmeqg pcrdvyghcp rtvsdlalqn hlgerwgpyf aeydwcstcs sssesdnegy
      841 flgepipqpa rlryvtseel lhkygsysmp ksstvgargq lhsrkrqksk nciis
//
LOCUS       XP_041322171             835 aa            linear   VRT 06-MAY-2021
DEFINITION  prickle-like protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322171
VERSION     XP_041322171.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466237.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..835
                     /product="prickle-like protein 2 isoform X2"
                     /calculated_mol_wt=94468
     Region          22..118
                     /region_name="PET_Prickle"
                     /note="The PET domain of Prickle; cd09827"
                     /db_xref="CDD:193602"
     Region          126..184
                     /region_name="LIM1_Prickle"
                     /note="The first LIM domain of Prickle; cd09415"
                     /db_xref="CDD:188799"
     Site            order(126,129,152,155,158,161,179,182)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188799"
     Region          189..244
                     /region_name="LIM2_Prickle"
                     /note="The second LIM domain of Prickle; cd09418"
                     /db_xref="CDD:188802"
     Site            order(191,194,212,215,218,221,239,242)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188802"
     Region          249..307
                     /region_name="LIM3_Prickle"
                     /note="The third LIM domain of Prickle; cd09420"
                     /db_xref="CDD:188804"
     Site            order(251,254,273,278,281,284,302,306)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188804"
     CDS             1..835
                     /gene="PRICKLE2"
                     /coded_by="XM_041466237.1:239..2746"
                     /db_xref="GeneID:121352886"
ORIGIN      
        1 mplemektvt klmfdfqrns tsdddsgcal eeyawvppgl kpeqvhqyys clpedkvpyv
       61 nspgeksrik qllhqlpphd nevrycnsld eeekrelklf snqrkrenlg rgnvrpfpvt
      121 mtgaiceqcg gqinggdmav fasraghgvc whppcficsv cnellvdliy fyqdgkiycg
      181 rhhaeclkpr caacdeiifa decteaegrh whmkhfccfe cetvlggqry imkdgrpycc
      241 scfeslyaey cdtcaqhigi dqgqmtydgq hwhatetcfc caqckksllg rpflpkqgqi
      301 fcsracsigd dpngsdssds afqsarakes rrsakigknk gkgeegarsp cnqlqvtsnr
      361 lstdvdplsl qmdllslasq tpslnrdhlw rsrdelyhyg gkmeqsqsqt plqllsqcni
      421 rtsynptqvp gsqsdlwakh fsnqkrsssl amkshggsfi qdcredyysg rlrsqesysd
      481 msnqsfpetr gsvkvpkyee eeeggmpasq crtrhpinal kftedltpte qtprgsmesl
      541 alsnatglsa dggakrqehl srfsmpdlsk dsgmnvsekm snmgtlnssm qfrsaesvrs
      601 llsvqqyqdm eptlhdlasp lgyqerpahg rmhqsfdygs gvpggklgaq eiprhtpmse
      661 rtrrrtvlrd ddrhyrphrp rrsrrsrsdn alhlaseqcy rlkerpslra rddydpfvhq
      721 rscretmeqg pcrdvyghcp rtvsdlalqn hlgerwgpyf aeydwcstcs sssesdnegy
      781 flgepipqpa rlryvtseel lhkygsysmp ksstvgargq lhsrkrqksk nciis
//
LOCUS       XP_041322184             896 aa            linear   VRT 06-MAY-2021
DEFINITION  dystroglycan [Pyrgilauda ruficollis].
ACCESSION   XP_041322184
VERSION     XP_041322184.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466250.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="dystroglycan"
                     /calculated_mol_wt=97972
     Region          61..162
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          181..303
                     /region_name="a_DG1_N2"
                     /note="Alpha-Dystroglycan N-terminal domain 2; pfam18424"
                     /db_xref="CDD:465761"
     Site            order(198..199,203..204,206..207,210,221..227)
                     /site_type="other"
                     /note="CA-like domain interface [polypeptide binding]"
                     /db_xref="CDD:206765"
     Region          <306..498
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          502..603
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          607..896
                     /region_name="DAG1"
                     /note="Dystroglycan (Dystrophin-associated glycoprotein
                     1); pfam05454"
                     /db_xref="CDD:461655"
     CDS             1..896
                     /gene="DAG1"
                     /coded_by="XM_041466250.1:504..3194"
                     /db_xref="GeneID:121352897"
ORIGIN      
        1 mtvgcllqpp vlgrtwlpvl llaasahchw psepaevvrd wenqleasmh svlsdlretv
       61 pavvgipdss avvgryfrvs iptdliasng evvqiseagk dslpswlhwn aesssleglp
      121 ldtdkgvhyi svttlqpfpn gsyvpqttnv fsvevhqedh sepqsvrvav qdtsdtapfv
      181 cgseepvtil tvildadltk mtpkqriell nrmrsfseve lhnmklvpvv nnrlfdmsaf
      241 magpgnakkv vengallswk lgcslsqnsv pniskveapa kegtmsarlg ypvvgwhian
      301 kkphlpkrmr rqinatptpl taigppttaa qepptrivpt ptspaiappt ettappvrep
      361 iplprkptvt irtrgpivqt ptlgpiqptr vaegtgtasv pirptmpgyv eptavitpps
      421 tttkkprvst lkpatpsttd sstaitrrpt rrpktprptk ppsttrspis klttasppsr
      481 vrttasglpr pwepneppkl tnhidrvdaw egtyfevkip sdtfydkedt ttdklqltlk
      541 lkeqqmieen swvqfnstsq lmygmpdhnh igkheyfmya tdkgglfavd afeihvhkrp
      601 hgdkspvkfk arlegdhnav vndihkkiml vkklalafgd rnsstitvqd iakgsivvew
      661 tnntlplepc preqirtlsk kiaddsgrps pafsnvlqpe fkplnvsvvg sgscrhiqfv
      721 pvtkdgrvis eatptvaagk dpeksseddv ylhtvipavv vaaillvagi iamicyrkkr
      781 kgkltiedqa tfikkgvpii fadelddskp ppsssmplil qeekaplppp eypnqsmpet
      841 tplnqdtige ytplrdedpn appyqppppf tapmegkgsr pknmtpyrsp ppyvpp
//
LOCUS       XP_041322194             896 aa            linear   VRT 06-MAY-2021
DEFINITION  dystroglycan [Pyrgilauda ruficollis].
ACCESSION   XP_041322194
VERSION     XP_041322194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="dystroglycan"
                     /calculated_mol_wt=97972
     Region          61..162
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          181..303
                     /region_name="a_DG1_N2"
                     /note="Alpha-Dystroglycan N-terminal domain 2; pfam18424"
                     /db_xref="CDD:465761"
     Site            order(198..199,203..204,206..207,210,221..227)
                     /site_type="other"
                     /note="CA-like domain interface [polypeptide binding]"
                     /db_xref="CDD:206765"
     Region          <306..498
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          502..603
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          607..896
                     /region_name="DAG1"
                     /note="Dystroglycan (Dystrophin-associated glycoprotein
                     1); pfam05454"
                     /db_xref="CDD:461655"
     CDS             1..896
                     /gene="DAG1"
                     /coded_by="XM_041466260.1:534..3224"
                     /db_xref="GeneID:121352897"
ORIGIN      
        1 mtvgcllqpp vlgrtwlpvl llaasahchw psepaevvrd wenqleasmh svlsdlretv
       61 pavvgipdss avvgryfrvs iptdliasng evvqiseagk dslpswlhwn aesssleglp
      121 ldtdkgvhyi svttlqpfpn gsyvpqttnv fsvevhqedh sepqsvrvav qdtsdtapfv
      181 cgseepvtil tvildadltk mtpkqriell nrmrsfseve lhnmklvpvv nnrlfdmsaf
      241 magpgnakkv vengallswk lgcslsqnsv pniskveapa kegtmsarlg ypvvgwhian
      301 kkphlpkrmr rqinatptpl taigppttaa qepptrivpt ptspaiappt ettappvrep
      361 iplprkptvt irtrgpivqt ptlgpiqptr vaegtgtasv pirptmpgyv eptavitpps
      421 tttkkprvst lkpatpsttd sstaitrrpt rrpktprptk ppsttrspis klttasppsr
      481 vrttasglpr pwepneppkl tnhidrvdaw egtyfevkip sdtfydkedt ttdklqltlk
      541 lkeqqmieen swvqfnstsq lmygmpdhnh igkheyfmya tdkgglfavd afeihvhkrp
      601 hgdkspvkfk arlegdhnav vndihkkiml vkklalafgd rnsstitvqd iakgsivvew
      661 tnntlplepc preqirtlsk kiaddsgrps pafsnvlqpe fkplnvsvvg sgscrhiqfv
      721 pvtkdgrvis eatptvaagk dpeksseddv ylhtvipavv vaaillvagi iamicyrkkr
      781 kgkltiedqa tfikkgvpii fadelddskp ppsssmplil qeekaplppp eypnqsmpet
      841 tplnqdtige ytplrdedpn appyqppppf tapmegkgsr pknmtpyrsp ppyvpp
//
LOCUS       XP_041322204             896 aa            linear   VRT 06-MAY-2021
DEFINITION  dystroglycan [Pyrgilauda ruficollis].
ACCESSION   XP_041322204
VERSION     XP_041322204.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466270.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="dystroglycan"
                     /calculated_mol_wt=97972
     Region          61..162
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          181..303
                     /region_name="a_DG1_N2"
                     /note="Alpha-Dystroglycan N-terminal domain 2; pfam18424"
                     /db_xref="CDD:465761"
     Site            order(198..199,203..204,206..207,210,221..227)
                     /site_type="other"
                     /note="CA-like domain interface [polypeptide binding]"
                     /db_xref="CDD:206765"
     Region          <306..498
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          502..603
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          607..896
                     /region_name="DAG1"
                     /note="Dystroglycan (Dystrophin-associated glycoprotein
                     1); pfam05454"
                     /db_xref="CDD:461655"
     CDS             1..896
                     /gene="DAG1"
                     /coded_by="XM_041466270.1:152..2842"
                     /db_xref="GeneID:121352897"
ORIGIN      
        1 mtvgcllqpp vlgrtwlpvl llaasahchw psepaevvrd wenqleasmh svlsdlretv
       61 pavvgipdss avvgryfrvs iptdliasng evvqiseagk dslpswlhwn aesssleglp
      121 ldtdkgvhyi svttlqpfpn gsyvpqttnv fsvevhqedh sepqsvrvav qdtsdtapfv
      181 cgseepvtil tvildadltk mtpkqriell nrmrsfseve lhnmklvpvv nnrlfdmsaf
      241 magpgnakkv vengallswk lgcslsqnsv pniskveapa kegtmsarlg ypvvgwhian
      301 kkphlpkrmr rqinatptpl taigppttaa qepptrivpt ptspaiappt ettappvrep
      361 iplprkptvt irtrgpivqt ptlgpiqptr vaegtgtasv pirptmpgyv eptavitpps
      421 tttkkprvst lkpatpsttd sstaitrrpt rrpktprptk ppsttrspis klttasppsr
      481 vrttasglpr pwepneppkl tnhidrvdaw egtyfevkip sdtfydkedt ttdklqltlk
      541 lkeqqmieen swvqfnstsq lmygmpdhnh igkheyfmya tdkgglfavd afeihvhkrp
      601 hgdkspvkfk arlegdhnav vndihkkiml vkklalafgd rnsstitvqd iakgsivvew
      661 tnntlplepc preqirtlsk kiaddsgrps pafsnvlqpe fkplnvsvvg sgscrhiqfv
      721 pvtkdgrvis eatptvaagk dpeksseddv ylhtvipavv vaaillvagi iamicyrkkr
      781 kgkltiedqa tfikkgvpii fadelddskp ppsssmplil qeekaplppp eypnqsmpet
      841 tplnqdtige ytplrdedpn appyqppppf tapmegkgsr pknmtpyrsp ppyvpp
//
LOCUS       XP_041322214             896 aa            linear   VRT 06-MAY-2021
DEFINITION  dystroglycan [Pyrgilauda ruficollis].
ACCESSION   XP_041322214
VERSION     XP_041322214.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466280.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="dystroglycan"
                     /calculated_mol_wt=97972
     Region          61..162
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          181..303
                     /region_name="a_DG1_N2"
                     /note="Alpha-Dystroglycan N-terminal domain 2; pfam18424"
                     /db_xref="CDD:465761"
     Site            order(198..199,203..204,206..207,210,221..227)
                     /site_type="other"
                     /note="CA-like domain interface [polypeptide binding]"
                     /db_xref="CDD:206765"
     Region          <306..498
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          502..603
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          607..896
                     /region_name="DAG1"
                     /note="Dystroglycan (Dystrophin-associated glycoprotein
                     1); pfam05454"
                     /db_xref="CDD:461655"
     CDS             1..896
                     /gene="DAG1"
                     /coded_by="XM_041466280.1:494..3184"
                     /db_xref="GeneID:121352897"
ORIGIN      
        1 mtvgcllqpp vlgrtwlpvl llaasahchw psepaevvrd wenqleasmh svlsdlretv
       61 pavvgipdss avvgryfrvs iptdliasng evvqiseagk dslpswlhwn aesssleglp
      121 ldtdkgvhyi svttlqpfpn gsyvpqttnv fsvevhqedh sepqsvrvav qdtsdtapfv
      181 cgseepvtil tvildadltk mtpkqriell nrmrsfseve lhnmklvpvv nnrlfdmsaf
      241 magpgnakkv vengallswk lgcslsqnsv pniskveapa kegtmsarlg ypvvgwhian
      301 kkphlpkrmr rqinatptpl taigppttaa qepptrivpt ptspaiappt ettappvrep
      361 iplprkptvt irtrgpivqt ptlgpiqptr vaegtgtasv pirptmpgyv eptavitpps
      421 tttkkprvst lkpatpsttd sstaitrrpt rrpktprptk ppsttrspis klttasppsr
      481 vrttasglpr pwepneppkl tnhidrvdaw egtyfevkip sdtfydkedt ttdklqltlk
      541 lkeqqmieen swvqfnstsq lmygmpdhnh igkheyfmya tdkgglfavd afeihvhkrp
      601 hgdkspvkfk arlegdhnav vndihkkiml vkklalafgd rnsstitvqd iakgsivvew
      661 tnntlplepc preqirtlsk kiaddsgrps pafsnvlqpe fkplnvsvvg sgscrhiqfv
      721 pvtkdgrvis eatptvaagk dpeksseddv ylhtvipavv vaaillvagi iamicyrkkr
      781 kgkltiedqa tfikkgvpii fadelddskp ppsssmplil qeekaplppp eypnqsmpet
      841 tplnqdtige ytplrdedpn appyqppppf tapmegkgsr pknmtpyrsp ppyvpp
//
LOCUS       XP_041322220             896 aa            linear   VRT 06-MAY-2021
DEFINITION  dystroglycan [Pyrgilauda ruficollis].
ACCESSION   XP_041322220
VERSION     XP_041322220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="dystroglycan"
                     /calculated_mol_wt=97972
     Region          61..162
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          181..303
                     /region_name="a_DG1_N2"
                     /note="Alpha-Dystroglycan N-terminal domain 2; pfam18424"
                     /db_xref="CDD:465761"
     Site            order(198..199,203..204,206..207,210,221..227)
                     /site_type="other"
                     /note="CA-like domain interface [polypeptide binding]"
                     /db_xref="CDD:206765"
     Region          <306..498
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          502..603
                     /region_name="Dystroglycan_repeat"
                     /note="Cadherin-like repeat domain of alpha dystroglycan;
                     cd11303"
                     /db_xref="CDD:206636"
     Region          607..896
                     /region_name="DAG1"
                     /note="Dystroglycan (Dystrophin-associated glycoprotein
                     1); pfam05454"
                     /db_xref="CDD:461655"
     CDS             1..896
                     /gene="DAG1"
                     /coded_by="XM_041466286.1:380..3070"
                     /db_xref="GeneID:121352897"
ORIGIN      
        1 mtvgcllqpp vlgrtwlpvl llaasahchw psepaevvrd wenqleasmh svlsdlretv
       61 pavvgipdss avvgryfrvs iptdliasng evvqiseagk dslpswlhwn aesssleglp
      121 ldtdkgvhyi svttlqpfpn gsyvpqttnv fsvevhqedh sepqsvrvav qdtsdtapfv
      181 cgseepvtil tvildadltk mtpkqriell nrmrsfseve lhnmklvpvv nnrlfdmsaf
      241 magpgnakkv vengallswk lgcslsqnsv pniskveapa kegtmsarlg ypvvgwhian
      301 kkphlpkrmr rqinatptpl taigppttaa qepptrivpt ptspaiappt ettappvrep
      361 iplprkptvt irtrgpivqt ptlgpiqptr vaegtgtasv pirptmpgyv eptavitpps
      421 tttkkprvst lkpatpsttd sstaitrrpt rrpktprptk ppsttrspis klttasppsr
      481 vrttasglpr pwepneppkl tnhidrvdaw egtyfevkip sdtfydkedt ttdklqltlk
      541 lkeqqmieen swvqfnstsq lmygmpdhnh igkheyfmya tdkgglfavd afeihvhkrp
      601 hgdkspvkfk arlegdhnav vndihkkiml vkklalafgd rnsstitvqd iakgsivvew
      661 tnntlplepc preqirtlsk kiaddsgrps pafsnvlqpe fkplnvsvvg sgscrhiqfv
      721 pvtkdgrvis eatptvaagk dpeksseddv ylhtvipavv vaaillvagi iamicyrkkr
      781 kgkltiedqa tfikkgvpii fadelddskp ppsssmplil qeekaplppp eypnqsmpet
      841 tplnqdtige ytplrdedpn appyqppppf tapmegkgsr pknmtpyrsp ppyvpp
//
LOCUS       XP_041322233             705 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatocyte growth factor-like protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322233
VERSION     XP_041322233.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466299.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..705
                     /product="hepatocyte growth factor-like protein isoform
                     X1"
                     /calculated_mol_wt=79209
     Region          <50..102
                     /region_name="PAN_AP_HGF"
                     /note="Subfamily of PAN/APPLE-like domains; present in
                     N-terminal (N) domains of plasminogen/hepatocyte growth
                     factor proteins, and various proteins found in Bilateria,
                     such as leech anti-platelet proteins. PAN/APPLE domains
                     fulfill diverse biological functions...; cd01099"
                     /db_xref="CDD:238532"
     Region          106..186
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            117
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(132,142,166,168,176)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          189..268
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            198
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(213,223,248,250,258)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          280..360
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            289
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(304,314,339,341,349)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          379..447
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            order(391,401,427,429,437)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          478..701
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            478
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(516,562,655)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(649,674,676)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..705
                     /gene="MST1"
                     /coded_by="XM_041466299.1:104..2221"
                     /db_xref="GeneID:121352916"
ORIGIN      
        1 mqpvlgllla laaalgsghr splndfqrlr atellavpvd sppllpeqgt veqcaqrcat
       61 slacrafhhd qqsqlcqllp wtqhspriql qknirydlyq kkdymrdciv gdgsgyrgtr
      121 attekglrcq hwqattphdh rflpslrngl eenycrnpdr dkrgpwcytv dpnvrhqscg
      181 ikkcedavcm tcngedyrgt vdhtesgtec qrwdlqhphk hpyhpnkypd kglddnycrn
      241 pdsserpwcy ttdpererey chirvctekr prpvnitngc frgkgegyrg rvnvtvsgip
      301 cqrwdsqvph khhflpekyp ckdlqenycr npdgseapwc ftsrttiria fcfhirrcpd
      361 eqdaqecyhg hgkhyhghvs ktrkgitcqp waaqtphvpq ispathpeah leenycrnpd
      421 ddshgpwcyt mdprtpfdyc aikpcsgstv psimentdav afeqcgqree rlqqkgrivg
      481 gqpgnspwtv sirnragvhf cggslvkeqw vistrqcffs ceadltgyev qlgtlfkdpg
      541 pgdpdqqtip ivrivcgpse sqlvmlklar pavltrrval iclpperyvv pagtvceiag
      601 wgetrgtadg svlnvarlpv lahgecnral rgrlkeselc taplragvga cegdyggpla
      661 cltadcwvle gvitpsrvca rtdlpalfir vslyvdwisk vmkmg
//
LOCUS       XP_041322243             704 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatocyte growth factor-like protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322243
VERSION     XP_041322243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..704
                     /product="hepatocyte growth factor-like protein isoform
                     X2"
                     /calculated_mol_wt=79107
     Region          <50..102
                     /region_name="PAN_AP_HGF"
                     /note="Subfamily of PAN/APPLE-like domains; present in
                     N-terminal (N) domains of plasminogen/hepatocyte growth
                     factor proteins, and various proteins found in Bilateria,
                     such as leech anti-platelet proteins. PAN/APPLE domains
                     fulfill diverse biological functions...; cd01099"
                     /db_xref="CDD:238532"
     Region          106..186
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            117
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(132,142,166,168,176)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          189..266
                     /region_name="Kringle"
                     /note="Kringle domain; pfam00051"
                     /db_xref="CDD:395005"
     Site            198
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(213,223,248,250,258)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          279..359
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            288
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(303,313,338,340,348)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          378..446
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            order(390,400,426,428,436)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          477..700
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            477
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(515,561,654)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(648,673,675)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..704
                     /gene="MST1"
                     /coded_by="XM_041466309.1:104..2218"
                     /db_xref="GeneID:121352916"
ORIGIN      
        1 mqpvlgllla laaalgsghr splndfqrlr atellavpvd sppllpeqgt veqcaqrcat
       61 slacrafhhd qqsqlcqllp wtqhspriql qknirydlyq kkdymrdciv gdgsgyrgtr
      121 attekglrcq hwqattphdh rflpslrngl eenycrnpdr dkrgpwcytv dpnvrhqscg
      181 ikkcedavcm tcngedyrgt vdhtesgtec qrwdlqhphk hpyhpnkypd kglddnycrn
      241 pdsserpwcy ttdpererey chirvckkrp rpvnitngcf rgkgegyrgr vnvtvsgipc
      301 qrwdsqvphk hhflpekypc kdlqenycrn pdgseapwcf tsrttiriaf cfhirrcpde
      361 qdaqecyhgh gkhyhghvsk trkgitcqpw aaqtphvpqi spathpeahl eenycrnpdd
      421 dshgpwcytm dprtpfdyca ikpcsgstvp simentdava feqcgqreer lqqkgrivgg
      481 qpgnspwtvs irnragvhfc ggslvkeqwv istrqcffsc eadltgyevq lgtlfkdpgp
      541 gdpdqqtipi vrivcgpses qlvmlklarp avltrrvali clpperyvvp agtvceiagw
      601 getrgtadgs vlnvarlpvl ahgecnralr grlkeselct aplragvgac egdyggplac
      661 ltadcwvleg vitpsrvcar tdlpalfirv slyvdwiskv mkmg
//
LOCUS       XP_041322253             601 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatocyte growth factor-like protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322253
VERSION     XP_041322253.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466319.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="hepatocyte growth factor-like protein isoform
                     X3"
                     /calculated_mol_wt=67510
     Region          2..82
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            13
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(28,38,62,64,72)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          85..164
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            94
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(109,119,144,146,154)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          176..256
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            185
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(200,210,235,237,245)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          275..343
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            order(287,297,323,325,333)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          374..597
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            374
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(412,458,551)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(545,570,572)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..601
                     /gene="MST1"
                     /coded_by="XM_041466319.1:94..1899"
                     /db_xref="GeneID:121352916"
ORIGIN      
        1 mrdcivgdgs gyrgtratte kglrcqhwqa ttphdhrflp slrngleeny crnpdrdkrg
       61 pwcytvdpnv rhqscgikkc edavcmtcng edyrgtvdht esgtecqrwd lqhphkhpyh
      121 pnkypdkgld dnycrnpdss erpwcyttdp erereychir vctekrprpv nitngcfrgk
      181 gegyrgrvnv tvsgipcqrw dsqvphkhhf lpekypckdl qenycrnpdg seapwcftsr
      241 ttiriafcfh irrcpdeqda qecyhghgkh yhghvsktrk gitcqpwaaq tphvpqispa
      301 thpeahleen ycrnpdddsh gpwcytmdpr tpfdycaikp csgstvpsim entdavafeq
      361 cgqreerlqq kgrivggqpg nspwtvsirn ragvhfcggs lvkeqwvist rqcffscead
      421 ltgyevqlgt lfkdpgpgdp dqqtipivri vcgpsesqlv mlklarpavl trrvaliclp
      481 peryvvpagt vceiagwget rgtadgsvln varlpvlahg ecnralrgrl keselctapl
      541 ragvgacegd yggplaclta dcwvlegvit psrvcartdl palfirvsly vdwiskvmkm
      601 g
//
LOCUS       XP_041322267             650 aa            linear   VRT 06-MAY-2021
DEFINITION  acylamino-acid-releasing enzyme-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322267
VERSION     XP_041322267.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466333.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..650
                     /product="acylamino-acid-releasing enzyme-like isoform X1"
                     /calculated_mol_wt=70130
     Region          <103..273
                     /region_name="APEH_N"
                     /note="Acylamino-acid-releasing enzyme, N-terminal domain;
                     pfam19283"
                     /db_xref="CDD:466026"
     Region          221..386
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     Region          473..>642
                     /region_name="DAP2"
                     /note="Dipeptidyl aminopeptidase/acylaminoacyl peptidase
                     [Amino acid transport and metabolism]; COG1506"
                     /db_xref="CDD:441115"
     CDS             1..650
                     /gene="LOC121352923"
                     /coded_by="XM_041466333.1:53..2005"
                     /db_xref="GeneID:121352923"
ORIGIN      
        1 matgtekgve hvpsliqaar gpaacyrels rfpavtraal raaaggqtfl lytecsrpdp
       61 arrrllrfgr hyslrrtagr eglavsrtal saeihsqlls qdsptgqrra alkrcprqgh
      121 ellevwdsgg cshsvdltal gkhgdvyteg pfaclawsrs etrllyvaek srpkrqppcp
      181 wdvpgaawpa aededeegkq fvyhedwgea lstrsmpvlc vldleglsls vlegvpehls
      241 pgqalwspdd rgvvfvgwwh tpfrlglnac snrrsgifhl dlasgccell saengsvcsp
      301 rlspdgqrll ylegavggph rqclrlrmlt wqtrqtmtvl dvvqepteaf aglyaealpp
      361 rcwaadsrra vlgtpqrsrt dlllvdteac tvtnltagss egcwellslq wdllvatcsa
      421 phhppslvva vlppagqelt lvwvpvedtp tvpgvtwktl tvqppcsgqs paaqdtqafe
      481 alllspsdgt pphplvvcph gecgdsgdtl avlvapqvmp mlapggphav fdarwrpsma
      541 alcrlgfavl lvnyrgslgf gqatisslls rvgeqdvadt qlaveqalhr epldphrlal
      601 lagshgafia lhllareper yqacalrspv snlpallgts dipdwaalll
//
LOCUS       XP_041322275             586 aa            linear   VRT 06-MAY-2021
DEFINITION  acylamino-acid-releasing enzyme-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322275
VERSION     XP_041322275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="acylamino-acid-releasing enzyme-like isoform X2"
                     /calculated_mol_wt=62941
     Region          <103..273
                     /region_name="APEH_N"
                     /note="Acylamino-acid-releasing enzyme, N-terminal domain;
                     pfam19283"
                     /db_xref="CDD:466026"
     Region          221..386
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     CDS             1..586
                     /gene="LOC121352923"
                     /coded_by="XM_041466341.1:53..1813"
                     /db_xref="GeneID:121352923"
ORIGIN      
        1 matgtekgve hvpsliqaar gpaacyrels rfpavtraal raaaggqtfl lytecsrpdp
       61 arrrllrfgr hyslrrtagr eglavsrtal saeihsqlls qdsptgqrra alkrcprqgh
      121 ellevwdsgg cshsvdltal gkhgdvyteg pfaclawsrs etrllyvaek srpkrqppcp
      181 wdvpgaawpa aededeegkq fvyhedwgea lstrsmpvlc vldleglsls vlegvpehls
      241 pgqalwspdd rgvvfvgwwh tpfrlglnac snrrsgifhl dlasgccell saengsvcsp
      301 rlspdgqrll ylegavggph rqclrlrmlt wqtrqtmtvl dvvqepteaf aglyaealpp
      361 rcwaadsrra vlgtpqrsrt dlllvdteac tvtnltagss egcwellslq wdllvatcsa
      421 phhppslvva vlppagqelt lvwvpvedtp tvpgvtwktl tvqppcsgqs paaqdtqafe
      481 alllspsdgt pphplvvcph gecgdsgdtl avlvapqvmp mlapggphav fdarwrpsma
      541 alcrlgfavl lagsgagaaq rapgptppgp agwlprslhr pppprp
//
LOCUS       XP_041322284             586 aa            linear   VRT 06-MAY-2021
DEFINITION  acylamino-acid-releasing enzyme-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322284
VERSION     XP_041322284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="acylamino-acid-releasing enzyme-like isoform X2"
                     /calculated_mol_wt=62941
     Region          <103..273
                     /region_name="APEH_N"
                     /note="Acylamino-acid-releasing enzyme, N-terminal domain;
                     pfam19283"
                     /db_xref="CDD:466026"
     Region          221..386
                     /region_name="TolB"
                     /note="Periplasmic component TolB of the Tol biopolymer
                     transport system [Intracellular trafficking, secretion,
                     and vesicular transport]; COG0823"
                     /db_xref="CDD:440585"
     CDS             1..586
                     /gene="LOC121352923"
                     /coded_by="XM_041466350.1:53..1813"
                     /db_xref="GeneID:121352923"
ORIGIN      
        1 matgtekgve hvpsliqaar gpaacyrels rfpavtraal raaaggqtfl lytecsrpdp
       61 arrrllrfgr hyslrrtagr eglavsrtal saeihsqlls qdsptgqrra alkrcprqgh
      121 ellevwdsgg cshsvdltal gkhgdvyteg pfaclawsrs etrllyvaek srpkrqppcp
      181 wdvpgaawpa aededeegkq fvyhedwgea lstrsmpvlc vldleglsls vlegvpehls
      241 pgqalwspdd rgvvfvgwwh tpfrlglnac snrrsgifhl dlasgccell saengsvcsp
      301 rlspdgqrll ylegavggph rqclrlrmlt wqtrqtmtvl dvvqepteaf aglyaealpp
      361 rcwaadsrra vlgtpqrsrt dlllvdteac tvtnltagss egcwellslq wdllvatcsa
      421 phhppslvva vlppagqelt lvwvpvedtp tvpgvtwktl tvqppcsgqs paaqdtqafe
      481 alllspsdgt pphplvvcph gecgdsgdtl avlvapqvmp mlapggphav fdarwrpsma
      541 alcrlgfavl lagsgagaaq rapgptppgp agwlprslhr pppprp
//
LOCUS       XP_041322299             143 aa            linear   VRT 06-MAY-2021
DEFINITION  high mobility group protein HMGI-C-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322299
VERSION     XP_041322299.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466365.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..143
                     /product="high mobility group protein HMGI-C-like"
                     /calculated_mol_wt=15070
     CDS             1..143
                     /gene="LOC121352934"
                     /coded_by="XM_041466365.1:32..463"
                     /db_xref="GeneID:121352934"
ORIGIN      
        1 mssegaenpi sstltqgvkr krgrpkkqpq edggntaiip qdavepqpvk kprgrpkgsk
       61 kttvlsggma epsagkrrrg rprkwpqavv qegesqgedp lessdlnlns apatqditgk
      121 dgsrsakttg lrrclshipa aaq
//
LOCUS       XP_041322312             767 aa            linear   VRT 06-MAY-2021
DEFINITION  NCK-interacting protein with SH3 domain isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322312
VERSION     XP_041322312.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466378.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..767
                     /product="NCK-interacting protein with SH3 domain isoform
                     X1"
                     /calculated_mol_wt=83647
     Region          593..728
                     /region_name="SPIN90_LRD"
                     /note="SPIN90/Ldb17, leucine-rich domain; pfam09431"
                     /db_xref="CDD:462796"
     CDS             1..767
                     /gene="NCKIPSD"
                     /coded_by="XM_041466378.1:13..2316"
                     /db_xref="GeneID:121352941"
ORIGIN      
        1 mggssdrrag sgpgncvtge ghkragageg pvlvdpangp sgvgaggqsr gqgprsggls
       61 rglvpwvleq dvvlqsidra ieavhnaamk nggkynleqr dvlqklihhr ketvsrkshs
      121 ptpqgtvmtq sssdhhldvs rqpngvcrtg yerhhslpnt efegedegly qippqahraa
      181 pvtppppekr kntqigapik naveiipgsa ssassistts ldtlytassv setalptats
      241 spantpppvp srsvhttitr nldsgsvths rygtspkdts kspqskraap appaeggtqr
      301 shnvdgekts qvkktapgpp asldafsnlc ledkkaagve llpaeagglv asvpktigae
      361 lielvrrnth lsyelsrvai givighiqts vpatssimeq ilisvveskn lsaglpsgqi
      421 chdeqrlevi fadlarhkdd aqqrswalye denviccyle ellriltdad pevckkmckk
      481 nefesvlslv ayyqmehrvp lrllllkcfg amcnldaavi stlvnsvlpm elardmqtht
      541 qdhqkmcysa lvlammfsmg eplpyhhyeh lnsqfvqfll dviedglpsd ttdqlpdlfv
      601 nvllafnlhi pvpehsvimt tiskhsnvkt ftekllllln rgddpvcifk hqpqpphsvl
      661 kflqdifask dtasifyhtd mmvlidilvr qiadlspgdk lrmeylslmh aiirstpylq
      721 hqhrltdlqg ilqrilgeee edqqcqmekl iileiykefp eissgts
//
LOCUS       XP_041322321             766 aa            linear   VRT 06-MAY-2021
DEFINITION  NCK-interacting protein with SH3 domain isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322321
VERSION     XP_041322321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466387.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..766
                     /product="NCK-interacting protein with SH3 domain isoform
                     X2"
                     /calculated_mol_wt=84245
     Region          592..727
                     /region_name="SPIN90_LRD"
                     /note="SPIN90/Ldb17, leucine-rich domain; pfam09431"
                     /db_xref="CDD:462796"
     CDS             1..766
                     /gene="NCKIPSD"
                     /coded_by="XM_041466387.1:17..2317"
                     /db_xref="GeneID:121352941"
ORIGIN      
        1 mglgaavssw rapgltgcvp wpparllcll rvraspgrap ipcwgsgeer drprelaggs
       61 prgtqvleqd vvlqsidrai eavhnaamkn ggkynleqrd vlqklihhrk etvsrkshsp
      121 tpqgtvmtqs ssdhhldvsr qpngvcrtgy erhhslpnte fegedeglyq ippqahraap
      181 vtppppekrk ntqigapikn aveiipgsas sassisttsl dtlytassvs etalptatss
      241 pantpppvps rsvhttitrn ldsgsvthsr ygtspkdtsk spqskraapa ppaeggtqrs
      301 hnvdgektsq vkktapgppa sldafsnlcl edkkaagvel lpaeagglva svpktigael
      361 ielvrrnthl syelsrvaig ivighiqtsv patssimeqi lisvvesknl saglpsgqic
      421 hdeqrlevif adlarhkdda qqrswalyed enviccylee llriltdadp evckkmckkn
      481 efesvlslva yyqmehrvpl rllllkcfga mcnldaavis tlvnsvlpme lardmqthtq
      541 dhqkmcysal vlammfsmge plpyhhyehl nsqfvqflld viedglpsdt tdqlpdlfvn
      601 vllafnlhip vpehsvimtt iskhsnvktf teklllllnr gddpvcifkh qpqpphsvlk
      661 flqdifaskd tasifyhtdm mvlidilvrq iadlspgdkl rmeylslmha iirstpylqh
      721 qhrltdlqgi lqrilgeeee dqqcqmekli ileiykefpe issgts
//
LOCUS       XP_041322330             758 aa            linear   VRT 06-MAY-2021
DEFINITION  NCK-interacting protein with SH3 domain isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322330
VERSION     XP_041322330.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466396.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="NCK-interacting protein with SH3 domain isoform
                     X3"
                     /calculated_mol_wt=83919
     Region          1..54
                     /region_name="SH3_SPIN90"
                     /note="Src homology 3 domain of SH3 protein interacting
                     with Nck, 90 kDa (SPIN90); cd11849"
                     /db_xref="CDD:212783"
     Site            order(6,8,11,15,33..34,49,51..52)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212783"
     Region          584..719
                     /region_name="SPIN90_LRD"
                     /note="SPIN90/Ldb17, leucine-rich domain; pfam09431"
                     /db_xref="CDD:462796"
     CDS             1..758
                     /gene="NCKIPSD"
                     /coded_by="XM_041466396.1:80..2356"
                     /db_xref="GeneID:121352941"
ORIGIN      
        1 myralysfrs aepnslpfaa getflllers nqhwwlvtra gsgetgyapa sylqrlqvle
       61 qdvvlqsidr aieavhnaam knggkynleq rdvlqklihh rketvsrksh sptpqgtvmt
      121 qsssdhhldv srqpngvcrt gyerhhslpn tefegedegl yqippqahra apvtppppek
      181 rkntqigapi knaveiipgs assassistt sldtlytass vsetalptat sspantpppv
      241 psrsvhttit rnldsgsvth srygtspkdt skspqskraa pappaeggtq rshnvdgekt
      301 sqvkktapgp pasldafsnl cledkkaagv ellpaeaggl vasvpktiga elielvrrnt
      361 hlsyelsrva igivighiqt svpatssime qilisvvesk nlsaglpsgq ichdeqrlev
      421 ifadlarhkd daqqrswaly edenviccyl eellriltda dpevckkmck knefesvlsl
      481 vayyqmehrv plrllllkcf gamcnldaav istlvnsvlp melardmqth tqdhqkmcys
      541 alvlammfsm geplpyhhye hlnsqfvqfl ldviedglps dttdqlpdlf vnvllafnlh
      601 ipvpehsvim ttiskhsnvk tfteklllll nrgddpvcif khqpqpphsv lkflqdifas
      661 kdtasifyht dmmvlidilv rqiadlspgd klrmeylslm haiirstpyl qhqhrltdlq
      721 gilqrilgee eedqqcqmek liileiykef peissgts
//
LOCUS       XP_041322339             742 aa            linear   VRT 06-MAY-2021
DEFINITION  NCK-interacting protein with SH3 domain isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322339
VERSION     XP_041322339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466405.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..742
                     /product="NCK-interacting protein with SH3 domain isoform
                     X4"
                     /calculated_mol_wt=81879
     Region          568..703
                     /region_name="SPIN90_LRD"
                     /note="SPIN90/Ldb17, leucine-rich domain; pfam09431"
                     /db_xref="CDD:462796"
     CDS             1..742
                     /gene="NCKIPSD"
                     /coded_by="XM_041466405.1:229..2457"
                     /db_xref="GeneID:121352941"
ORIGIN      
        1 mkhipaagtg fsselssall aghwqlrwgv sgalwtcqdl wvleqdvvlq sidraieavh
       61 naamknggky nleqrdvlqk lihhrketvs rkshsptpqg tvmtqsssdh hldvsrqpng
      121 vcrtgyerhh slpntefege deglyqippq ahraapvtpp ppekrkntqi gapiknavei
      181 ipgsassass isttsldtly tassvsetal ptatsspant pppvpsrsvh ttitrnldsg
      241 svthsrygts pkdtskspqs kraapappae ggtqrshnvd gektsqvkkt apgppaslda
      301 fsnlcledkk aagvellpae agglvasvpk tigaelielv rrnthlsyel srvaigivig
      361 hiqtsvpats simeqilisv vesknlsagl psgqichdeq rlevifadla rhkddaqqrs
      421 walyedenvi ccyleellri ltdadpevck kmckknefes vlslvayyqm ehrvplrlll
      481 lkcfgamcnl daavistlvn svlpmelard mqthtqdhqk mcysalvlam mfsmgeplpy
      541 hhyehlnsqf vqflldvied glpsdttdql pdlfvnvlla fnlhipvpeh svimttiskh
      601 snvktftekl llllnrgddp vcifkhqpqp phsvlkflqd ifaskdtasi fyhtdmmvli
      661 dilvrqiadl spgdklrmey lslmhaiirs tpylqhqhrl tdlqgilqri lgeeeedqqc
      721 qmekliilei ykefpeissg ts
//
LOCUS       XP_041322347             717 aa            linear   VRT 06-MAY-2021
DEFINITION  NCK-interacting protein with SH3 domain isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322347
VERSION     XP_041322347.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466413.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..717
                     /product="NCK-interacting protein with SH3 domain isoform
                     X5"
                     /calculated_mol_wt=79218
     Region          543..678
                     /region_name="SPIN90_LRD"
                     /note="SPIN90/Ldb17, leucine-rich domain; pfam09431"
                     /db_xref="CDD:462796"
     CDS             1..717
                     /gene="NCKIPSD"
                     /coded_by="XM_041466413.1:171..2324"
                     /db_xref="GeneID:121352941"
ORIGIN      
        1 mcsntfysvs lvlclevleq dvvlqsidra ieavhnaamk nggkynleqr dvlqklihhr
       61 ketvsrkshs ptpqgtvmtq sssdhhldvs rqpngvcrtg yerhhslpnt efegedegly
      121 qippqahraa pvtppppekr kntqigapik naveiipgsa ssassistts ldtlytassv
      181 setalptats spantpppvp srsvhttitr nldsgsvths rygtspkdts kspqskraap
      241 appaeggtqr shnvdgekts qvkktapgpp asldafsnlc ledkkaagve llpaeagglv
      301 asvpktigae lielvrrnth lsyelsrvai givighiqts vpatssimeq ilisvveskn
      361 lsaglpsgqi chdeqrlevi fadlarhkdd aqqrswalye denviccyle ellriltdad
      421 pevckkmckk nefesvlslv ayyqmehrvp lrllllkcfg amcnldaavi stlvnsvlpm
      481 elardmqtht qdhqkmcysa lvlammfsmg eplpyhhyeh lnsqfvqfll dviedglpsd
      541 ttdqlpdlfv nvllafnlhi pvpehsvimt tiskhsnvkt ftekllllln rgddpvcifk
      601 hqpqpphsvl kflqdifask dtasifyhtd mmvlidilvr qiadlspgdk lrmeylslmh
      661 aiirstpylq hqhrltdlqg ilqrilgeee edqqcqmekl iileiykefp eissgts
//
LOCUS       XP_041322357             679 aa            linear   VRT 06-MAY-2021
DEFINITION  NCK-interacting protein with SH3 domain isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322357
VERSION     XP_041322357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466423.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..679
                     /product="NCK-interacting protein with SH3 domain isoform
                     X6"
                     /calculated_mol_wt=75054
     Region          505..640
                     /region_name="SPIN90_LRD"
                     /note="SPIN90/Ldb17, leucine-rich domain; pfam09431"
                     /db_xref="CDD:462796"
     CDS             1..679
                     /gene="NCKIPSD"
                     /coded_by="XM_041466423.1:586..2625"
                     /db_xref="GeneID:121352941"
ORIGIN      
        1 mknggkynle qrdvlqklih hrketvsrks hsptpqgtvm tqsssdhhld vsrqpngvcr
       61 tgyerhhslp ntefegedeg lyqippqahr aapvtppppe krkntqigap iknaveiipg
      121 sassassist tsldtlytas svsetalpta tsspantppp vpsrsvhtti trnldsgsvt
      181 hsrygtspkd tskspqskra apappaeggt qrshnvdgek tsqvkktapg ppasldafsn
      241 lcledkkaag vellpaeagg lvasvpktig aelielvrrn thlsyelsrv aigivighiq
      301 tsvpatssim eqilisvves knlsaglpsg qichdeqrle vifadlarhk ddaqqrswal
      361 yedenviccy leellriltd adpevckkmc kknefesvls lvayyqmehr vplrllllkc
      421 fgamcnldaa vistlvnsvl pmelardmqt htqdhqkmcy salvlammfs mgeplpyhhy
      481 ehlnsqfvqf lldviedglp sdttdqlpdl fvnvllafnl hipvpehsvi mttiskhsnv
      541 ktftekllll lnrgddpvci fkhqpqpphs vlkflqdifa skdtasifyh tdmmvlidil
      601 vrqiadlspg dklrmeylsl mhaiirstpy lqhqhrltdl qgilqrilge eeedqqcqme
      661 kliileiyke fpeissgts
//
LOCUS       XP_041322370             607 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SHQ1 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322370
VERSION     XP_041322370.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466436.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="protein SHQ1 homolog isoform X1"
                     /calculated_mol_wt=68707
     Region          232..413
                     /region_name="SHQ1"
                     /note="SHQ1 protein; pfam04925"
                     /db_xref="CDD:461483"
     CDS             1..607
                     /gene="SHQ1"
                     /coded_by="XM_041466436.1:68..1891"
                     /db_xref="GeneID:121352964"
ORIGIN      
        1 mitpafeltq dsdfltvkir vpyarasefd iyfegedfkf yakpyflrlt lpgrivedgr
       61 ekasyntdeg tftiqlpkev pgqyfegldm ltsllapkks rsakplveem dtaasaelse
      121 eneeefdwem dqipyeessp plqhpygfgn lrsgvfqrlq delsdvidik dpdqtpaeer
      181 rrrrlaaeaa kfepdhylad ffedetikhl lkykpwwmda hkkmtalqgg shqehdspaf
      241 vvfseeereq mrkftnktyl ldkrshrhvy lglidillay cyeirvnegd knvesswnir
      301 klsatlcwle sfssihdvlv sfgrrvlcyp lyrhfelvtr afndtvvilq lgkaavlkcl
      361 ldihkifmes dpayilndlf itdyciwiqk vkskklaalc eslqkttlsk shmeleleel
      421 eaaavlvqee ekalkaagtv skqqllcses etsdseesss tsssetegsd sdeqesstse
      481 dgeinsfqgt lqeertaplt dcnglrqgtd tlamevgdgk skdslqstta pgklveelem
      541 qmqsalrlse qpeglatagc isqeqeenpv pepdrfseda agkgnflevs pkpnpllflc
      601 stneded
//
LOCUS       XP_041322378             394 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SHQ1 homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322378
VERSION     XP_041322378.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466444.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..394
                     /product="protein SHQ1 homolog isoform X2"
                     /calculated_mol_wt=45879
     Region          232..392
                     /region_name="SHQ1"
                     /note="SHQ1 protein; pfam04925"
                     /db_xref="CDD:461483"
     CDS             1..394
                     /gene="SHQ1"
                     /coded_by="XM_041466444.1:68..1252"
                     /db_xref="GeneID:121352964"
ORIGIN      
        1 mitpafeltq dsdfltvkir vpyarasefd iyfegedfkf yakpyflrlt lpgrivedgr
       61 ekasyntdeg tftiqlpkev pgqyfegldm ltsllapkks rsakplveem dtaasaelse
      121 eneeefdwem dqipyeessp plqhpygfgn lrsgvfqrlq delsdvidik dpdqtpaeer
      181 rrrrlaaeaa kfepdhylad ffedetikhl lkykpwwmda hkkmtalqgg shqehdspaf
      241 vvfseeereq mrkftnktyl ldkrshrhvy lglidillay cyeirvnegd knvesswnir
      301 klsatlcwle sfssihdvlv sfgrrvlcyp lyrhfelvtr afndtvvilq lgkaavlkcl
      361 ldihkifmes dpayilndlf itdyciwiqk vnll
//
LOCUS       XP_041322404             347 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352984 [Pyrgilauda ruficollis].
ACCESSION   XP_041322404
VERSION     XP_041322404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="uncharacterized protein LOC121352984"
                     /calculated_mol_wt=37476
     CDS             1..347
                     /gene="LOC121352984"
                     /coded_by="XM_041466470.1:1682..2725"
                     /db_xref="GeneID:121352984"
ORIGIN      
        1 mkwlwgcsfs drqtlswwsg spswafpmlg wkrqrpwqtr vkpllqlcls lertlcdppg
       61 saghcepgpg pgnalqthge aksqrsyqkp arpelpcsfp gtrpskqnqr ssapglaaaa
      121 lqanggfwer vgfgeaeval aavcrtpgta galspcqatp lmavcsrrlc psadrdaqqq
      181 nssltgnirf ffqpallclg asfqdivkqp qqdsyqprsl lcmkgsrrfa lhvgsrgqrq
      241 qagsavgqgm agrshrllaa qralneqpqt tprrlqfgel pprrkhnqtr apcqtlyvfs
      301 cigcksqlqg pgrgplpchq aaqgtqgtlp qalqgrglgl rcplcsg
//
LOCUS       XP_041322411             347 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352984 [Pyrgilauda ruficollis].
ACCESSION   XP_041322411
VERSION     XP_041322411.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466477.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="uncharacterized protein LOC121352984"
                     /calculated_mol_wt=37476
     CDS             1..347
                     /gene="LOC121352984"
                     /coded_by="XM_041466477.1:1690..2733"
                     /db_xref="GeneID:121352984"
ORIGIN      
        1 mkwlwgcsfs drqtlswwsg spswafpmlg wkrqrpwqtr vkpllqlcls lertlcdppg
       61 saghcepgpg pgnalqthge aksqrsyqkp arpelpcsfp gtrpskqnqr ssapglaaaa
      121 lqanggfwer vgfgeaeval aavcrtpgta galspcqatp lmavcsrrlc psadrdaqqq
      181 nssltgnirf ffqpallclg asfqdivkqp qqdsyqprsl lcmkgsrrfa lhvgsrgqrq
      241 qagsavgqgm agrshrllaa qralneqpqt tprrlqfgel pprrkhnqtr apcqtlyvfs
      301 cigcksqlqg pgrgplpchq aaqgtqgtlp qalqgrglgl rcplcsg
//
LOCUS       XP_041322440             708 aa            linear   VRT 06-MAY-2021
DEFINITION  DCC-interacting protein 13-alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041322440
VERSION     XP_041322440.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466506.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="DCC-interacting protein 13-alpha"
                     /calculated_mol_wt=79557
     Region          20..234
                     /region_name="BAR_APPL1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Adaptor
                     protein, Phosphotyrosine interaction, PH domain and
                     Leucine zipper containing 1; cd07631"
                     /db_xref="CDD:153315"
     Site            order(20,45..46,119,121,124,130,146,149,152,154,158,173)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153315"
     Site            order(29,32..33,37,40,43..44,47,57..58,60..61,64..65,
                     67..68,71,89,186,189..190,192,197..198,200..201,204..205,
                     207..208,211..212,214..215,219,222)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153315"
     Region          252..376
                     /region_name="BAR-PH_APPL"
                     /note="Adaptor protein containing PH domain, PTB domain,
                     and Leucine zipper motif Bin1/amphiphysin/Rvs167
                     (BAR)-Pleckstrin homology (PH) domain; cd13247"
                     /db_xref="CDD:270067"
     Region          488..623
                     /region_name="PTB_APPL"
                     /note="Adaptor protein containing PH domain, PTB domain,
                     and Leucine zipper motif (APPL; also called
                     DCC-interacting protein (DIP)-13alpha)
                     Phosphotyrosine-binding (PTB) domain; cd13158"
                     /db_xref="CDD:269980"
     Site            order(503,580,605)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269980"
     Site            order(569..574,587,614,618)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269980"
     CDS             1..708
                     /gene="APPL1"
                     /coded_by="XM_041466506.1:87..2213"
                     /db_xref="GeneID:121353012"
ORIGIN      
        1 mpgidklpie etledspqtr sllgvfeeda aaisnyinql fqamhriyda qnelsaathl
       61 tskllkeyek qrfplggdde vmtstlqqfa kvidelssch avlstqlada mmfpitqfke
      121 rdlkeiltlk evfqiasndh daaitrysrl skrkenekik aevtedvyts rkkqhqtmmh
      181 yfcalntlqy kkkisllepl lgymqaqisf fkmgsenlte qleefltnig tsvqnvrrem
      241 dcevenmqqt iedlevasdp lylpdpdptk fpahrnltrk agylnarnkt glvssswerq
      301 fyftqggnlm sqargdvagg lvmdidncsv mavdcedrry cfqitsfdgk kssilqaesk
      361 kdyeewicti nniskqiyls enpeeiaarv nqsaleavtp spsfqqrhes mrpavqsrpp
      421 aartsstgsl gsdstalsal sldslvapdt piqfdiispv sedlpgqaks sgqsgrrtnp
      481 fgesggskpe tedsilhqlf ivrflgsmev rsdespdvvy etmrqilaar aihnvfrmte
      541 shllvtcdcl klidpqtqvt rlrfplpsvv lyathqenkr lfgfvlrtsg grvesrqtsi
      601 cyifesnneg ekicdsvgla kqialhaeld rkasekqkei drvkekqqke lnkqkqiekd
      661 leeqsrliaa ssrsnqsste gqfvvlsssq sedsdlgedg kkkresea
//
LOCUS       XP_041322451             594 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322451
VERSION     XP_041322451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="ankyrin repeat and SOCS box protein 14"
                     /calculated_mol_wt=66273
     Region          55..303
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          119..149
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          151..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(184,186,190..191,194..196,198..199,203,206,215,217,
                     219,223..224,227..229,231..232,236,239,248,250,252,
                     256..257,260..262,264..265,269,272)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          184..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          185..>448
                     /region_name="PHA02875"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165206"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..313
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          315..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..587
                     /region_name="SOCS_ASB14"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB14-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system; cd03730"
                     /db_xref="CDD:239700"
     Site            order(532..537,543,556,562,567)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239700"
     CDS             1..594
                     /gene="ASB14"
                     /coded_by="XM_041466517.1:217..2001"
                     /db_xref="GeneID:121353023"
ORIGIN      
        1 mnnsvymvdg dsdeeistqr aiqeslqdrh kfetsgsate iesfqytask ehgqiiaair
       61 tgqeealkkl vrhssafeea dqqgwlpvhe aaaqlnknil eitlkasrdi tweqstlkge
      121 tpllvavrnc fvdnvhflll ngcnpnvkne egdsplviai kldsydiasl llrsgarvnl
      181 rcvhertalh eaarlgrkdl vqlllesgad pdprsgyglt plalaaqmgh teimelllqk
      241 gadvlsqamd casilfeaag ggnpdsvsll leygadanvp khsghlpihr aayrghflal
      301 kylvpvtdfs aikesgispv hsaaagahpq clefllqsgf danfmlaqrv rkgyddhrks
      361 alyfavsngd icstqlllsa galtnqdpin clqialrmgn yelmnlllrh ganvnyfcrv
      421 ntthfpsalq yalkdevmlr mllnygydvh rcfdcprgsg dhsqyvtdgw tstvikdtmf
      481 cevitlswlk hvsgkvvrvm ldyvdhvkic wkleavlkeq elwpdihfil tnprslkhlc
      541 rlkiracmgr lrlrcpvfmt flplpnclkd yilykeydly gqenytgiyn lnca
//
LOCUS       XP_041322465             594 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322465
VERSION     XP_041322465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="ankyrin repeat and SOCS box protein 14"
                     /calculated_mol_wt=66273
     Region          55..303
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          119..149
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          151..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(184,186,190..191,194..196,198..199,203,206,215,217,
                     219,223..224,227..229,231..232,236,239,248,250,252,
                     256..257,260..262,264..265,269,272)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          184..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          185..>448
                     /region_name="PHA02875"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165206"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..313
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          315..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..587
                     /region_name="SOCS_ASB14"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB14-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system; cd03730"
                     /db_xref="CDD:239700"
     Site            order(532..537,543,556,562,567)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239700"
     CDS             1..594
                     /gene="ASB14"
                     /coded_by="XM_041466531.1:152..1936"
                     /db_xref="GeneID:121353023"
ORIGIN      
        1 mnnsvymvdg dsdeeistqr aiqeslqdrh kfetsgsate iesfqytask ehgqiiaair
       61 tgqeealkkl vrhssafeea dqqgwlpvhe aaaqlnknil eitlkasrdi tweqstlkge
      121 tpllvavrnc fvdnvhflll ngcnpnvkne egdsplviai kldsydiasl llrsgarvnl
      181 rcvhertalh eaarlgrkdl vqlllesgad pdprsgyglt plalaaqmgh teimelllqk
      241 gadvlsqamd casilfeaag ggnpdsvsll leygadanvp khsghlpihr aayrghflal
      301 kylvpvtdfs aikesgispv hsaaagahpq clefllqsgf danfmlaqrv rkgyddhrks
      361 alyfavsngd icstqlllsa galtnqdpin clqialrmgn yelmnlllrh ganvnyfcrv
      421 ntthfpsalq yalkdevmlr mllnygydvh rcfdcprgsg dhsqyvtdgw tstvikdtmf
      481 cevitlswlk hvsgkvvrvm ldyvdhvkic wkleavlkeq elwpdihfil tnprslkhlc
      541 rlkiracmgr lrlrcpvfmt flplpnclkd yilykeydly gqenytgiyn lnca
//
LOCUS       XP_041322474             594 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322474
VERSION     XP_041322474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="ankyrin repeat and SOCS box protein 14"
                     /calculated_mol_wt=66273
     Region          55..303
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          119..149
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          151..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(184,186,190..191,194..196,198..199,203,206,215,217,
                     219,223..224,227..229,231..232,236,239,248,250,252,
                     256..257,260..262,264..265,269,272)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          184..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          185..>448
                     /region_name="PHA02875"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165206"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..313
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          315..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..587
                     /region_name="SOCS_ASB14"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB14-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system; cd03730"
                     /db_xref="CDD:239700"
     Site            order(532..537,543,556,562,567)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239700"
     CDS             1..594
                     /gene="ASB14"
                     /coded_by="XM_041466540.1:154..1938"
                     /db_xref="GeneID:121353023"
ORIGIN      
        1 mnnsvymvdg dsdeeistqr aiqeslqdrh kfetsgsate iesfqytask ehgqiiaair
       61 tgqeealkkl vrhssafeea dqqgwlpvhe aaaqlnknil eitlkasrdi tweqstlkge
      121 tpllvavrnc fvdnvhflll ngcnpnvkne egdsplviai kldsydiasl llrsgarvnl
      181 rcvhertalh eaarlgrkdl vqlllesgad pdprsgyglt plalaaqmgh teimelllqk
      241 gadvlsqamd casilfeaag ggnpdsvsll leygadanvp khsghlpihr aayrghflal
      301 kylvpvtdfs aikesgispv hsaaagahpq clefllqsgf danfmlaqrv rkgyddhrks
      361 alyfavsngd icstqlllsa galtnqdpin clqialrmgn yelmnlllrh ganvnyfcrv
      421 ntthfpsalq yalkdevmlr mllnygydvh rcfdcprgsg dhsqyvtdgw tstvikdtmf
      481 cevitlswlk hvsgkvvrvm ldyvdhvkic wkleavlkeq elwpdihfil tnprslkhlc
      541 rlkiracmgr lrlrcpvfmt flplpnclkd yilykeydly gqenytgiyn lnca
//
LOCUS       XP_041322482             594 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322482
VERSION     XP_041322482.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466548.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="ankyrin repeat and SOCS box protein 14"
                     /calculated_mol_wt=66273
     Region          55..303
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          119..149
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          151..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(184,186,190..191,194..196,198..199,203,206,215,217,
                     219,223..224,227..229,231..232,236,239,248,250,252,
                     256..257,260..262,264..265,269,272)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          184..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          185..>448
                     /region_name="PHA02875"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165206"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..313
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          315..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..587
                     /region_name="SOCS_ASB14"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB14-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system; cd03730"
                     /db_xref="CDD:239700"
     Site            order(532..537,543,556,562,567)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239700"
     CDS             1..594
                     /gene="ASB14"
                     /coded_by="XM_041466548.1:158..1942"
                     /db_xref="GeneID:121353023"
ORIGIN      
        1 mnnsvymvdg dsdeeistqr aiqeslqdrh kfetsgsate iesfqytask ehgqiiaair
       61 tgqeealkkl vrhssafeea dqqgwlpvhe aaaqlnknil eitlkasrdi tweqstlkge
      121 tpllvavrnc fvdnvhflll ngcnpnvkne egdsplviai kldsydiasl llrsgarvnl
      181 rcvhertalh eaarlgrkdl vqlllesgad pdprsgyglt plalaaqmgh teimelllqk
      241 gadvlsqamd casilfeaag ggnpdsvsll leygadanvp khsghlpihr aayrghflal
      301 kylvpvtdfs aikesgispv hsaaagahpq clefllqsgf danfmlaqrv rkgyddhrks
      361 alyfavsngd icstqlllsa galtnqdpin clqialrmgn yelmnlllrh ganvnyfcrv
      421 ntthfpsalq yalkdevmlr mllnygydvh rcfdcprgsg dhsqyvtdgw tstvikdtmf
      481 cevitlswlk hvsgkvvrvm ldyvdhvkic wkleavlkeq elwpdihfil tnprslkhlc
      541 rlkiracmgr lrlrcpvfmt flplpnclkd yilykeydly gqenytgiyn lnca
//
LOCUS       XP_041322492             594 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322492
VERSION     XP_041322492.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466558.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="ankyrin repeat and SOCS box protein 14"
                     /calculated_mol_wt=66273
     Region          55..303
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          119..149
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          151..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(184,186,190..191,194..196,198..199,203,206,215,217,
                     219,223..224,227..229,231..232,236,239,248,250,252,
                     256..257,260..262,264..265,269,272)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          184..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          185..>448
                     /region_name="PHA02875"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165206"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..313
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          315..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..587
                     /region_name="SOCS_ASB14"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB14-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system; cd03730"
                     /db_xref="CDD:239700"
     Site            order(532..537,543,556,562,567)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239700"
     CDS             1..594
                     /gene="ASB14"
                     /coded_by="XM_041466558.1:107..1891"
                     /db_xref="GeneID:121353023"
ORIGIN      
        1 mnnsvymvdg dsdeeistqr aiqeslqdrh kfetsgsate iesfqytask ehgqiiaair
       61 tgqeealkkl vrhssafeea dqqgwlpvhe aaaqlnknil eitlkasrdi tweqstlkge
      121 tpllvavrnc fvdnvhflll ngcnpnvkne egdsplviai kldsydiasl llrsgarvnl
      181 rcvhertalh eaarlgrkdl vqlllesgad pdprsgyglt plalaaqmgh teimelllqk
      241 gadvlsqamd casilfeaag ggnpdsvsll leygadanvp khsghlpihr aayrghflal
      301 kylvpvtdfs aikesgispv hsaaagahpq clefllqsgf danfmlaqrv rkgyddhrks
      361 alyfavsngd icstqlllsa galtnqdpin clqialrmgn yelmnlllrh ganvnyfcrv
      421 ntthfpsalq yalkdevmlr mllnygydvh rcfdcprgsg dhsqyvtdgw tstvikdtmf
      481 cevitlswlk hvsgkvvrvm ldyvdhvkic wkleavlkeq elwpdihfil tnprslkhlc
      541 rlkiracmgr lrlrcpvfmt flplpnclkd yilykeydly gqenytgiyn lnca
//
LOCUS       XP_041322500             594 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322500
VERSION     XP_041322500.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466566.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508101.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="ankyrin repeat and SOCS box protein 14"
                     /calculated_mol_wt=66273
     Region          55..303
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          55..81
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          119..149
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          151..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(184,186,190..191,194..196,198..199,203,206,215,217,
                     219,223..224,227..229,231..232,236,239,248,250,252,
                     256..257,260..262,264..265,269,272)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          184..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          185..>448
                     /region_name="PHA02875"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165206"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..313
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          315..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..587
                     /region_name="SOCS_ASB14"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB14-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system; cd03730"
                     /db_xref="CDD:239700"
     Site            order(532..537,543,556,562,567)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239700"
     CDS             1..594
                     /gene="ASB14"
                     /coded_by="XM_041466566.1:103..1887"
                     /db_xref="GeneID:121353023"
ORIGIN      
        1 mnnsvymvdg dsdeeistqr aiqeslqdrh kfetsgsate iesfqytask ehgqiiaair
       61 tgqeealkkl vrhssafeea dqqgwlpvhe aaaqlnknil eitlkasrdi tweqstlkge
      121 tpllvavrnc fvdnvhflll ngcnpnvkne egdsplviai kldsydiasl llrsgarvnl
      181 rcvhertalh eaarlgrkdl vqlllesgad pdprsgyglt plalaaqmgh teimelllqk
      241 gadvlsqamd casilfeaag ggnpdsvsll leygadanvp khsghlpihr aayrghflal
      301 kylvpvtdfs aikesgispv hsaaagahpq clefllqsgf danfmlaqrv rkgyddhrks
      361 alyfavsngd icstqlllsa galtnqdpin clqialrmgn yelmnlllrh ganvnyfcrv
      421 ntthfpsalq yalkdevmlr mllnygydvh rcfdcprgsg dhsqyvtdgw tstvikdtmf
      481 cevitlswlk hvsgkvvrvm ldyvdhvkic wkleavlkeq elwpdihfil tnprslkhlc
      541 rlkiracmgr lrlrcpvfmt flplpnclkd yilykeydly gqenytgiyn lnca
//
LOCUS       XP_041322556             587 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of tumorigenicity 7 protein-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322556
VERSION     XP_041322556.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466622.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="suppressor of tumorigenicity 7 protein-like
                     isoform X1"
                     /calculated_mol_wt=66010
     Region          34..555
                     /region_name="ST7"
                     /note="ST7 protein; pfam04184"
                     /db_xref="CDD:461214"
     CDS             1..587
                     /gene="ST7L"
                     /coded_by="XM_041466622.1:51..1814"
                     /db_xref="GeneID:121353092"
ORIGIN      
        1 maegsggaas grgppcpgaa aafrrweqlr rraatpwarg llavaaglgl lyavlrvpvr
       61 lrdglaavtm flstltpkfy faltvtssfi sglifvfeww hfrkygtsfi eqvsvshlrp
      121 liggaesspp apaafsages etsrqnmpec kvwrnplnlf rgaeysrymw vtgkepltyy
      181 dmnlsaqdhq tfftcdtdal rpsdtvmqka wrernpqari kaayqaleln ndcatayvll
      241 aeeeattivd aekyfkqalk agemiyrksq nchsqspqhe aqlrrdtnvl vyvkrrlamc
      301 arklgrirea vkmmrdlmke fpllsmlnih enlleallel qayadvqavl akyddislpk
      361 saaicytaal lkaravserw vfpfrfspet asrrglstae inaveaihra vefnphvpky
      421 llemkslvlp pehilkrgds eavayaffhl qhwkriegal nllhctwegt frmipyplek
      481 ghlfypypsc tetadrellp tfhevsvypq kelpffihft aglcsfsaml allthqfpel
      541 mvifakamas riwipsgstd cswwmgcsvg vlrvlwpvsa psvlasg
//
LOCUS       XP_041322564             581 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of tumorigenicity 7 protein-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322564
VERSION     XP_041322564.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466630.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="suppressor of tumorigenicity 7 protein-like
                     isoform X2"
                     /calculated_mol_wt=65177
     Region          34..549
                     /region_name="ST7"
                     /note="ST7 protein; pfam04184"
                     /db_xref="CDD:461214"
     CDS             1..581
                     /gene="ST7L"
                     /coded_by="XM_041466630.1:45..1790"
                     /db_xref="GeneID:121353092"
ORIGIN      
        1 maegsggaas grgppcpgaa aafrrweqlr rraatpwarg llavaaglgl lyavlrvpvr
       61 lrdglaavtm flstltpkfy faltvtssfi sglifvfeww hfrkygtsfi eqvsvshlrp
      121 liggaesspp apaafsages etsrqnmpec kvwrnplnlf rgaeysrymw vtgkepltyy
      181 dmnlsaqdhq tfftcdtdal rpsdtvmqka wrernpqari kaayqaleln ndcatayvll
      241 aeeeattivd aekyfkqalk agemiyrksq nchsqspqhe aqlrrdtnvl vyvkrrlamc
      301 arklgrirea vkmmrdlmke fpllsmlnih enlleallel qayadvqavl akyddislpk
      361 saaicytaal lkaravserf spetasrrgl staeinavea ihravefnph vpkyllemks
      421 lvlppehilk rgdseavaya ffhlqhwkri egalnllhct wegtfrmipy plekghlfyp
      481 ypsctetadr ellptfhevs vypqkelpff ihftaglcsf samlallthq fpelmvifak
      541 amasriwips gstdcswwmg csvgvlrvlw pvsapsvlas g
//
LOCUS       XP_041322576             564 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of tumorigenicity 7 protein-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322576
VERSION     XP_041322576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..564
                     /product="suppressor of tumorigenicity 7 protein-like
                     isoform X3"
                     /calculated_mol_wt=63510
     Region          34..552
                     /region_name="ST7"
                     /note="ST7 protein; pfam04184"
                     /db_xref="CDD:461214"
     CDS             1..564
                     /gene="ST7L"
                     /coded_by="XM_041466642.1:43..1737"
                     /db_xref="GeneID:121353092"
ORIGIN      
        1 maegsggaas grgppcpgaa aafrrweqlr rraatpwarg llavaaglgl lyavlrvpvr
       61 lrdglaavtm flstltpkfy faltvtssfi sglifvfeww hfrkygtsfi eqvsvshlrp
      121 liggaesspp apaafsages etsrqnmpec kvwrnplnlf rgaeysrymw vtgkepltyy
      181 dmnlsaqdhq tfftcdtdal rpsdtvmqka wrernpqari kaayqaleln ndcatayvll
      241 aeeeattivd aekyfkqalk agemiyrksq nchsqspqhe aqlrrdtnvl vyvkrrlamc
      301 arklgrirea vkmmrdlmke fpllsmlnih enlleallel qayadvqavl akyddislpk
      361 saaicytaal lkaravserw vfpfrfspet asrrglstae inaveaihra vefnphvpky
      421 llemkslvlp pehilkrgds eavayaffhl qhwkriegal nllhctwegt frmipyplek
      481 ghlfypypsc tetadrellp tfhevsvypq kelpffihft aglcsfsaml allthqfpel
      541 mvifakavlr vlwpvsapsv lasg
//
LOCUS       XP_041322591             286 aa            linear   VRT 06-MAY-2021
DEFINITION  F-actin-capping protein subunit alpha-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322591
VERSION     XP_041322591.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466657.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..286
                     /product="F-actin-capping protein subunit alpha-1"
                     /calculated_mol_wt=32797
     Region          17..282
                     /region_name="F-actin_cap_A"
                     /note="F-actin capping protein alpha subunit; pfam01267"
                     /db_xref="CDD:460142"
     CDS             1..286
                     /gene="CAPZA1"
                     /coded_by="XM_041466657.1:107..967"
                     /db_xref="GeneID:121353107"
ORIGIN      
        1 madleervsd eekvriaakf ithappgefn evfndvrlll nndnllrega ahafaqynmd
       61 qftpvkiegy edqvlitehg dlgngrfldp rnklsfkfdh lrkeasdpqa edtesalkqw
      121 rdacdsalra yvkdhypngf ctvygksidg qqtiiacies hqfqpknfwn grwrsewkft
      181 itpptaqvaa vlkiqvhyye dgnvqlvshk diqdsvqvss dvqtakefik iienaeneyq
      241 taisenyqtm sdttfkalrr qlpvtrtkid wnkilsykig kemqna
//
LOCUS       XP_041322601            1469 aa            linear   VRT 06-MAY-2021
DEFINITION  UHRF1-binding protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322601
VERSION     XP_041322601.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466667.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1469
                     /product="UHRF1-binding protein 1"
                     /calculated_mol_wt=161712
     Region          1..>96
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     CDS             1..1469
                     /gene="UHRF1BP1"
                     /coded_by="XM_041466667.1:109..4518"
                     /db_xref="GeneID:121353115"
ORIGIN      
        1 magiikkqil khlsrftknl spdkinlstl kgqgqltnle ldeevlqnvl elptwlaitr
       61 vycnkasiri qwtklkthpi clyldkveve mrtceeprpp ngqspialaa gqseygfaek
      121 vvegmfivvn sitikihska fhasfelwql qgysvnpnwq qsdlrltrit dpqrgevltf
      181 keltwqtlri eadatengdq dpvttplrli tnqgriqisl krrtkdcnvv asklmflldd
      241 llwvltdsql kammkyaesl seameksaqq rkslapesvq itppapsaqq swaqpfgasp
      301 nassigqyfd khdmkessyh llisrldlhi cddshareag alkhgmlgga iqltfrrmaf
      361 dyypfhragd ackhwvryse ametrgqwak klvsefqskm eklyeetdpv fagtplspfk
      421 kkpeppqsaq rsppekgrap prslprlrhp pwhrlrsscv vvrvddldvh qvstagqqsk
      481 kpstllscsr kifklpdqvs aihiefteyy fpdnqdfpvp cpnlymqlng lmltldtpsv
      541 lwinlfcldl crsleqfkai ykledsgkrd ehvdvrldgf rlklsipvdk kvtehrdrpq
      601 alcvcmaevt atntrhapsc scqdlqslfr kfagseffhs syaefpraqd rfsllhtlfl
      661 hhayhvddrp qkhpgfpqlp hktsasedlw svnfselslg fegaesskgr alsfidpfpl
      721 slwaclpkrw gqaqiskrqe latsevkikp sasfsnhskn enlsrehgvc qrsktdqdlr
      781 niykapdtmd vlgesdcevd dgvdskelea sadihvlmss svhvkvrlnh yqylvllrmk
      841 evlqalqeql aqdtqevtgs plapmsacvg vmfhsaeval lmtpapgsvv eprsldsdtt
      901 slieselsps dskeglaaee kelksessse kglgstselp edsgiqdtga svqlerlprs
      961 asdgalgaap rgkgaeekgl ieeaheavea lvaegpaets shpqsppalp sspasdtqps
     1021 grggvalngq aeliplrsie eelssalhit kdatkealha tmdltkeams ltkdalslsr
     1081 dkmtstmqrm lslppardsv pkaeegavtp ggagsgrmrf fsmkrtssqh sfdttsvdgs
     1141 gpedglsvds dgsdgfvmlt dsepsldpls sgqlpqahnd tgsrsslvae deggvspevn
     1201 sstsqsedps lqlvsvlvlk mndvncavev qgddlsvalq vmnvvpeqln nvgmwqflrg
     1261 yvalgdpgve kaaspgagqp rpevclrlqs gpsaaalspl aerngflqvl lhsqctelct
     1321 scltslgpfl edeiipevip meievvdaki tlkddsppvy ptspgpvpit lamdhlvvrr
     1381 rddgvfylta sqgkdsvkqe kpvsvpeeqk apsesvspap aagarglqlk qvpelqrelq
     1441 tmklalaean mdkarllqei rkynplfql
//
LOCUS       XP_041322614             214 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription initiation factor TFIID subunit 11 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322614
VERSION     XP_041322614.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466680.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..214
                     /product="transcription initiation factor TFIID subunit 11
                     isoform X1"
                     /calculated_mol_wt=22592
     Region          111..196
                     /region_name="TAFII28"
                     /note="hTAFII28-like protein conserved region; pfam04719"
                     /db_xref="CDD:428086"
     Site            order(116,118,121..122,124..126,128..129,134,151,155,164,
                     175,178..179,186..188,191..192,194..196,198..200)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     Site            order(119,122..123,126..127,130..133,136..137,140..141,
                     144..145,160..162,164..166,169,173,184..187,190..191,194)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     CDS             1..214
                     /gene="TAF11"
                     /coded_by="XM_041466680.1:29..673"
                     /db_xref="GeneID:121353121"
ORIGIN      
        1 madpardalg aaapepppag csppaagdaa avgeaaaaeg agegevgeag ggselkaeva
       61 dgevrsadge aadsedpalq asaarkvkle lkerkekkqk vdedeiqkmq ilvssfseeq
      121 lnryemyrrs afpkaaikrl iqsitgtsvs qnvviamsgi skvfvgevve ealdgcekwg
      181 elpplqpkhm reavrrlkar gqipnskykk iifh
//
LOCUS       XP_041322624             196 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription initiation factor TFIID subunit 11 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322624
VERSION     XP_041322624.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466690.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..196
                     /product="transcription initiation factor TFIID subunit 11
                     isoform X2"
                     /calculated_mol_wt=20935
     Region          93..178
                     /region_name="TAFII28"
                     /note="hTAFII28-like protein conserved region; pfam04719"
                     /db_xref="CDD:428086"
     Site            order(98,100,103..104,106..108,110..111,116,133,137,146,
                     157,160..161,168..170,173..174,176..178,180..182)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     Site            order(101,104..105,108..109,112..115,118..119,122..123,
                     126..127,142..144,146..148,151,155,166..169,172..173,176)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467028"
     CDS             1..196
                     /gene="TAF11"
                     /coded_by="XM_041466690.1:20..610"
                     /db_xref="GeneID:121353121"
ORIGIN      
        1 madpardalg aaapepppag csppaagdaa avgeaaaaeg agegevrsad geaadsedpa
       61 lqasaarkvk lelkerkekk qkvdedeiqk mqilvssfse eqlnryemyr rsafpkaaik
      121 rliqsitgts vsqnvviams giskvfvgev veealdgcek wgelpplqpk hmreavrrlk
      181 argqipnsky kkiifh
//
LOCUS       XP_041322636             441 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisome proliferator-activated receptor delta isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322636
VERSION     XP_041322636.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466702.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="peroxisome proliferator-activated receptor delta
                     isoform X1"
                     /calculated_mol_wt=49647
     Region          72..155
                     /region_name="NR_DBD_Ppar"
                     /note="DNA-binding domain of peroxisome
                     proliferator-activated receptors (PPAR) is composed of two
                     C4-type zinc fingers; cd06965"
                     /db_xref="CDD:143523"
     Site            order(73,76,90,93,109,114,124,127)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143523"
     Site            order(81..85,91..92,94,96,98..99,102,121..122,125,128,139,
                     142..146,148)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143523"
     Site            order(119..120,122..123)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143523"
     Region          172..440
                     /region_name="NR_LBD_PPAR"
                     /note="The ligand binding domain of peroxisome
                     proliferator-activated receptors; cd06932"
                     /db_xref="CDD:132730"
     Site            order(248..249,253,287,291,294,303,305,328,413)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132730"
     Site            order(258,261,265,270,275..276,278..279,282..283)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132730"
     Site            order(337,359,362,371,394,398,401,403..404,407..408,415)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132730"
     CDS             1..441
                     /gene="PPARD"
                     /coded_by="XM_041466702.1:294..1619"
                     /db_xref="GeneID:121353130"
ORIGIN      
        1 meqlqeevpe vkeeeeeeav mvasgasdpt ggpdsslpss sytdlsqsss pslsdqlqmg
       61 ceeaalgaln vecrvcgdka sgfhygvhac egckgffrrt irmkleyekc ersckiqkkn
      121 rnkcqycrfq kclslgmshn airfgrmpea ekrklvaglt aseigcqnpq vadlkafskh
      181 iynaylknfn mtkkkargil tgkasstpqp fvihdmdtlw qaekglvwkq lvngippyke
      241 igvhvfyrcq cttvetvrel tefaksipsf iglylndqvt llkygvheai famlasimnk
      301 dgllvangng fvtreflrsl rkpfneimep kfefavkfna lelddsdlsl fvaaiilcgd
      361 rpglmnvkqv eeiqdnilra lefhlqsnhp daqylfpkll qkmadlrqlv tehaqlvqki
      421 kktetetslh pllqeiykdm y
//
LOCUS       XP_041322645             441 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisome proliferator-activated receptor delta isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322645
VERSION     XP_041322645.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466711.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="peroxisome proliferator-activated receptor delta
                     isoform X1"
                     /calculated_mol_wt=49647
     Region          72..155
                     /region_name="NR_DBD_Ppar"
                     /note="DNA-binding domain of peroxisome
                     proliferator-activated receptors (PPAR) is composed of two
                     C4-type zinc fingers; cd06965"
                     /db_xref="CDD:143523"
     Site            order(73,76,90,93,109,114,124,127)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143523"
     Site            order(81..85,91..92,94,96,98..99,102,121..122,125,128,139,
                     142..146,148)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143523"
     Site            order(119..120,122..123)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143523"
     Region          172..440
                     /region_name="NR_LBD_PPAR"
                     /note="The ligand binding domain of peroxisome
                     proliferator-activated receptors; cd06932"
                     /db_xref="CDD:132730"
     Site            order(248..249,253,287,291,294,303,305,328,413)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132730"
     Site            order(258,261,265,270,275..276,278..279,282..283)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132730"
     Site            order(337,359,362,371,394,398,401,403..404,407..408,415)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132730"
     CDS             1..441
                     /gene="PPARD"
                     /coded_by="XM_041466711.1:120..1445"
                     /db_xref="GeneID:121353130"
ORIGIN      
        1 meqlqeevpe vkeeeeeeav mvasgasdpt ggpdsslpss sytdlsqsss pslsdqlqmg
       61 ceeaalgaln vecrvcgdka sgfhygvhac egckgffrrt irmkleyekc ersckiqkkn
      121 rnkcqycrfq kclslgmshn airfgrmpea ekrklvaglt aseigcqnpq vadlkafskh
      181 iynaylknfn mtkkkargil tgkasstpqp fvihdmdtlw qaekglvwkq lvngippyke
      241 igvhvfyrcq cttvetvrel tefaksipsf iglylndqvt llkygvheai famlasimnk
      301 dgllvangng fvtreflrsl rkpfneimep kfefavkfna lelddsdlsl fvaaiilcgd
      361 rpglmnvkqv eeiqdnilra lefhlqsnhp daqylfpkll qkmadlrqlv tehaqlvqki
      421 kktetetslh pllqeiykdm y
//
LOCUS       XP_041322655             441 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisome proliferator-activated receptor delta isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322655
VERSION     XP_041322655.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466721.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="peroxisome proliferator-activated receptor delta
                     isoform X1"
                     /calculated_mol_wt=49647
     Region          72..155
                     /region_name="NR_DBD_Ppar"
                     /note="DNA-binding domain of peroxisome
                     proliferator-activated receptors (PPAR) is composed of two
                     C4-type zinc fingers; cd06965"
                     /db_xref="CDD:143523"
     Site            order(73,76,90,93,109,114,124,127)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143523"
     Site            order(81..85,91..92,94,96,98..99,102,121..122,125,128,139,
                     142..146,148)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143523"
     Site            order(119..120,122..123)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143523"
     Region          172..440
                     /region_name="NR_LBD_PPAR"
                     /note="The ligand binding domain of peroxisome
                     proliferator-activated receptors; cd06932"
                     /db_xref="CDD:132730"
     Site            order(248..249,253,287,291,294,303,305,328,413)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132730"
     Site            order(258,261,265,270,275..276,278..279,282..283)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132730"
     Site            order(337,359,362,371,394,398,401,403..404,407..408,415)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132730"
     CDS             1..441
                     /gene="PPARD"
                     /coded_by="XM_041466721.1:235..1560"
                     /db_xref="GeneID:121353130"
ORIGIN      
        1 meqlqeevpe vkeeeeeeav mvasgasdpt ggpdsslpss sytdlsqsss pslsdqlqmg
       61 ceeaalgaln vecrvcgdka sgfhygvhac egckgffrrt irmkleyekc ersckiqkkn
      121 rnkcqycrfq kclslgmshn airfgrmpea ekrklvaglt aseigcqnpq vadlkafskh
      181 iynaylknfn mtkkkargil tgkasstpqp fvihdmdtlw qaekglvwkq lvngippyke
      241 igvhvfyrcq cttvetvrel tefaksipsf iglylndqvt llkygvheai famlasimnk
      301 dgllvangng fvtreflrsl rkpfneimep kfefavkfna lelddsdlsl fvaaiilcgd
      361 rpglmnvkqv eeiqdnilra lefhlqsnhp daqylfpkll qkmadlrqlv tehaqlvqki
      421 kktetetslh pllqeiykdm y
//
LOCUS       XP_041322663             440 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisome proliferator-activated receptor delta isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322663
VERSION     XP_041322663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="peroxisome proliferator-activated receptor delta
                     isoform X2"
                     /calculated_mol_wt=49519
     Region          72..155
                     /region_name="NR_DBD_Ppar"
                     /note="DNA-binding domain of peroxisome
                     proliferator-activated receptors (PPAR) is composed of two
                     C4-type zinc fingers; cd06965"
                     /db_xref="CDD:143523"
     Site            order(73,76,90,93,109,114,124,127)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143523"
     Site            order(81..85,91..92,94,96,98..99,102,121..122,125,128,139,
                     142..146,148)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143523"
     Site            order(119..120,122..123)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143523"
     Region          172..439
                     /region_name="NR_LBD_PPAR"
                     /note="The ligand binding domain of peroxisome
                     proliferator-activated receptors; cd06932"
                     /db_xref="CDD:132730"
     Site            order(247..248,252,286,290,293,302,304,327,412)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132730"
     Site            order(257,260,264,269,274..275,277..278,281..282)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132730"
     Site            order(336,358,361,370,393,397,400,402..403,406..407,414)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132730"
     CDS             1..440
                     /gene="PPARD"
                     /coded_by="XM_041466729.1:292..1614"
                     /db_xref="GeneID:121353130"
ORIGIN      
        1 meqlqeevpe vkeeeeeeav mvasgasdpt ggpdsslpss sytdlsqsss pslsdqlqmg
       61 ceeaalgaln vecrvcgdka sgfhygvhac egckgffrrt irmkleyekc ersckiqkkn
      121 rnkcqycrfq kclslgmshn airfgrmpea ekrklvaglt aseigcqnpq vadlkafskh
      181 iynaylknfn mtkkkargil tgkasstppf vihdmdtlwq aekglvwkql vngippykei
      241 gvhvfyrcqc ttvetvrelt efaksipsfi glylndqvtl lkygvheaif amlasimnkd
      301 gllvangngf vtreflrslr kpfneimepk fefavkfnal elddsdlslf vaaiilcgdr
      361 pglmnvkqve eiqdnilral efhlqsnhpd aqylfpkllq kmadlrqlvt ehaqlvqkik
      421 ktetetslhp llqeiykdmy
//
LOCUS       XP_041322676             316 aa            linear   VRT 06-MAY-2021
DEFINITION  adenosine receptor A3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322676
VERSION     XP_041322676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="adenosine receptor A3"
                     /calculated_mol_wt=35183
     Region          14..290
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          15..39
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          48..70
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          84..106
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          129..145
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          171..194
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          224..246
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          258..283
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..316
                     /gene="ADORA3"
                     /coded_by="XM_041466742.1:567..1517"
                     /db_xref="GeneID:121353149"
ORIGIN      
        1 mlnsslalss ldgiyigtec lvaliatlgn vlviwaarln aacqnttlyf iaslaladaa
       61 mgllvmplav vvslgmampa ysclfmccll lvfsnasils llaiavdryl rvklptrykt
      121 itterrvwwa lglcwslsll gglvpmfgwn kagprsssyl rcrfisvmrm dymvyfcfft
      181 wtlvpllvmc vlyaeifyii htklsqgtav rgarafygqe fkaakslalv lllfaiswlp
      241 lciincifyf hpesqippyl iylaillsha nsamnpivya ykikkfktty llilrtyvlc
      301 knpdpalaeq ttdpes
//
LOCUS       XP_041322688             184 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rap-1A [Pyrgilauda ruficollis].
ACCESSION   XP_041322688
VERSION     XP_041322688.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466754.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="ras-related protein Rap-1A"
                     /calculated_mol_wt=20870
     Region          3..167
                     /region_name="Rap1"
                     /note="Rap1 family GTPase consists of Rap1a and Rap1b
                     isoforms; cd04175"
                     /db_xref="CDD:133375"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133375"
     Site            order(11..12,59..60)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133375"
     Site            order(12..18,28..30,32,34..35,60,116..117,119,147..149)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133375"
     Site            order(17..18,32,34,40..41,54..55,57,59..60,149)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133375"
     Site            order(25,31,33,36..41)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:133375"
     Site            33..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133375"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133375"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133375"
     Site            59..77
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133375"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133375"
     Site            147..149
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133375"
     CDS             1..184
                     /gene="RAP1A"
                     /coded_by="XM_041466754.1:229..783"
                     /db_xref="GeneID:121353155"
ORIGIN      
        1 mreyklvvlg sggvgksalt vqfvqgifve kydptiedsy rkqvevdcqq cmleildtag
       61 teqftamrdl ymkngqgfal vysitaqstf ndlqdlreqi lrvkdtedvp milvgnkcdl
      121 eeervvgkeq gqnlarqwcn caflessaks kinvneifyd lvrqinrktp vekkkpkkks
      181 clll
//
LOCUS       XP_041322696             184 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rap-1A [Pyrgilauda ruficollis].
ACCESSION   XP_041322696
VERSION     XP_041322696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="ras-related protein Rap-1A"
                     /calculated_mol_wt=20870
     Region          3..167
                     /region_name="Rap1"
                     /note="Rap1 family GTPase consists of Rap1a and Rap1b
                     isoforms; cd04175"
                     /db_xref="CDD:133375"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133375"
     Site            order(11..12,59..60)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133375"
     Site            order(12..18,28..30,32,34..35,60,116..117,119,147..149)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133375"
     Site            order(17..18,32,34,40..41,54..55,57,59..60,149)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133375"
     Site            order(25,31,33,36..41)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:133375"
     Site            33..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133375"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133375"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133375"
     Site            59..77
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133375"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133375"
     Site            147..149
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133375"
     CDS             1..184
                     /gene="RAP1A"
                     /coded_by="XM_041466762.1:71..625"
                     /db_xref="GeneID:121353155"
ORIGIN      
        1 mreyklvvlg sggvgksalt vqfvqgifve kydptiedsy rkqvevdcqq cmleildtag
       61 teqftamrdl ymkngqgfal vysitaqstf ndlqdlreqi lrvkdtedvp milvgnkcdl
      121 eeervvgkeq gqnlarqwcn caflessaks kinvneifyd lvrqinrktp vekkkpkkks
      181 clll
//
LOCUS       XP_041322717             252 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP synthase F(0) complex subunit B1, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322717
VERSION     XP_041322717.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466783.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..252
                     /product="ATP synthase F(0) complex subunit B1,
                     mitochondrial"
                     /calculated_mol_wt=28138
     Region          87..242
                     /region_name="Mt_ATP-synt_B"
                     /note="Mitochondrial ATP synthase B chain precursor
                     (ATP-synt_B); pfam05405"
                     /db_xref="CDD:368426"
     CDS             1..252
                     /gene="ATP5PB"
                     /coded_by="XM_041466783.1:111..869"
                     /db_xref="GeneID:121353174"
ORIGIN      
        1 mlsrlvlraa paalralppp vavgvlhatr plhttqqsla pvpplpekgg evrhglipee
       61 ffqflypktg vtgpymlgtg lllyllskei yvinhetaaa aciltvivya ikkfgpdvaa
      121 fadklneekv atalamknea iqtlqtaied ekkeqwraeg rsylfdakrn niamlletny
      181 rerlltvyne vkkrldyqva mqnlkrqkeq dhmiqwvern vvqsitpqqq kesiakcild
      241 lkalsksaha av
//
LOCUS       XP_041322730             119 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein C1orf162 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322730
VERSION     XP_041322730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..119
                     /product="transmembrane protein C1orf162 homolog"
                     /calculated_mol_wt=13203
     CDS             1..119
                     /gene="CUNH1orf162"
                     /coded_by="XM_041466796.1:112..471"
                     /db_xref="GeneID:121353183"
ORIGIN      
        1 mggfsskeap vapepicptt tvtttvhtpt pdfkaaearc winnheilyv slafisgill
       61 tvlvfaiifl frksskrshq nlpqetftqr aaeeslrntq nevtystlvf qrgrtplhl
//
LOCUS       XP_041322743             615 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 76 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322743
VERSION     XP_041322743.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466809.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..615
                     /product="zinc finger protein 76 isoform X1"
                     /calculated_mol_wt=66554
     Region          228..250
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(235,237,239,241..242,245..246,249,265,267,271..272,
                     275..276,279,295,297,299,301..302,305..306,309)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <240..427
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          258..280
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          288..310
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          318..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          348..370
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          378..400
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          408..426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..615
                     /gene="ZNF76"
                     /coded_by="XM_041466809.1:595..2442"
                     /db_xref="GeneID:121353188"
ORIGIN      
        1 melffllkar skddgpvslw apraarqdpc vgismeslgl pavtlgdsst aclqqaarge
       61 kliegqviel edgttayihq vtvqkeavaf edgqpvvled gsmafihsta kesyepstfq
      121 avqledgsta yihhpvilap gstilqvqte tglqelagee eddgldvdti nalqqygrkg
      181 sdeeeegvtd tchvkskdss nissqdlqee evqshrkgqq vgsrafrcgy kgcgrlytta
      241 hhlkvherah tgdrpytcdf pscgkafatg yglkshvrth tgekpykcpe dlcskafkts
      301 gdlqkhirth tgerpfkcpf vgcgrsftts nirkvhirth tgerpymcae pgcgrgftsa
      361 tnyknhmrih tgekpylctv pgcgkrftey sslykhhvvh thckpytcss cgktyrqtst
      421 lamhkrsshg eleateeseq alyeqqqlra aaaadrgspv esqhiaflse meedeeedav
      481 ptqislisqd gteqvslsqe elqalgsaig vvtqsgvlav pegqlaagdt gamtvastdg
      541 teaqevavva sgaeeesgit plchqqvall atshgthiav qleeqqslee alsmatavih
      601 yepvppdtal peqgs
//
LOCUS       XP_041322751             581 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 76 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322751
VERSION     XP_041322751.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466817.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="zinc finger protein 76 isoform X2"
                     /calculated_mol_wt=62797
     Region          194..216
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(201,203,205,207..208,211..212,215,231,233,237..238,
                     241..242,245,261,263,265,267..268,271..272,275)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <206..393
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          224..246
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          254..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          284..306
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          314..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          344..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          374..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..581
                     /gene="ZNF76"
                     /coded_by="XM_041466817.1:158..1903"
                     /db_xref="GeneID:121353188"
ORIGIN      
        1 meslglpavt lgdsstaclq qaargeklie gqvieledgt tayihqvtvq keavafedgq
       61 pvvledgsma fihstakesy epstfqavql edgstayihh pvilapgsti lqvqtetglq
      121 elageeeddg ldvdtinalq qygrkgsdee eegvtdtchv kskdssniss qdlqeeevqs
      181 hrkgqqvgsr afrcgykgcg rlyttahhlk vherahtgdr pytcdfpscg kafatgyglk
      241 shvrthtgek pykcpedlcs kafktsgdlq khirthtger pfkcpfvgcg rsfttsnirk
      301 vhirthtger pymcaepgcg rgftsatnyk nhmrihtgek pylctvpgcg krfteyssly
      361 khhvvhthck pytcsscgkt yrqtstlamh krsshgelea teeseqalye qqqlraaaaa
      421 drgspvesqh iaflsemeed eeedavptqi slisqdgteq vslsqeelqa lgsaigvvtq
      481 sgvlavpegq laagdtgamt vastdgteaq evavvasgae eesgitplch qqvallatsh
      541 gthiavqlee qqsleealsm atavihyepv ppdtalpeqg s
//
LOCUS       XP_041322761             581 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 76 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322761
VERSION     XP_041322761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="zinc finger protein 76 isoform X2"
                     /calculated_mol_wt=62797
     Region          194..216
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(201,203,205,207..208,211..212,215,231,233,237..238,
                     241..242,245,261,263,265,267..268,271..272,275)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <206..393
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          224..246
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          254..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          284..306
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          314..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          344..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          374..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..581
                     /gene="ZNF76"
                     /coded_by="XM_041466827.1:196..1941"
                     /db_xref="GeneID:121353188"
ORIGIN      
        1 meslglpavt lgdsstaclq qaargeklie gqvieledgt tayihqvtvq keavafedgq
       61 pvvledgsma fihstakesy epstfqavql edgstayihh pvilapgsti lqvqtetglq
      121 elageeeddg ldvdtinalq qygrkgsdee eegvtdtchv kskdssniss qdlqeeevqs
      181 hrkgqqvgsr afrcgykgcg rlyttahhlk vherahtgdr pytcdfpscg kafatgyglk
      241 shvrthtgek pykcpedlcs kafktsgdlq khirthtger pfkcpfvgcg rsfttsnirk
      301 vhirthtger pymcaepgcg rgftsatnyk nhmrihtgek pylctvpgcg krfteyssly
      361 khhvvhthck pytcsscgkt yrqtstlamh krsshgelea teeseqalye qqqlraaaaa
      421 drgspvesqh iaflsemeed eeedavptqi slisqdgteq vslsqeelqa lgsaigvvtq
      481 sgvlavpegq laagdtgamt vastdgteaq evavvasgae eesgitplch qqvallatsh
      541 gthiavqlee qqsleealsm atavihyepv ppdtalpeqg s
//
LOCUS       XP_041322770             513 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 76 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322770
VERSION     XP_041322770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..513
                     /product="zinc finger protein 76 isoform X3"
                     /calculated_mol_wt=55670
     Region          126..148
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(133,135,137,139..140,143..144,147,163,165,169..170,
                     173..174,177,193,195,197,199..200,203..204,207)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <138..325
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          156..178
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          186..208
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          216..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          246..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          276..298
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          306..324
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..513
                     /gene="ZNF76"
                     /coded_by="XM_041466836.1:81..1622"
                     /db_xref="GeneID:121353188"
ORIGIN      
        1 mafihstake syepstfqav qledgstayi hhpvilapgs tilqvqtetg lqelageeed
       61 dgldvdtina lqqygrkgsd eeeegvtdtc hvkskdssni ssqdlqeeev qshrkgqqvg
      121 srafrcgykg cgrlyttahh lkvherahtg drpytcdfps cgkafatgyg lkshvrthtg
      181 ekpykcpedl cskafktsgd lqkhirthtg erpfkcpfvg cgrsfttsni rkvhirthtg
      241 erpymcaepg cgrgftsatn yknhmrihtg ekpylctvpg cgkrfteyss lykhhvvhth
      301 ckpytcsscg ktyrqtstla mhkrsshgel eateeseqal yeqqqlraaa aadrgspves
      361 qhiaflseme edeeedavpt qislisqdgt eqvslsqeel qalgsaigvv tqsgvlavpe
      421 gqlaagdtga mtvastdgte aqevavvasg aeeesgitpl chqqvallat shgthiavql
      481 eeqqsleeal smatavihye pvppdtalpe qgs
//
LOCUS       XP_041322778             508 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 76 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322778
VERSION     XP_041322778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466844.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="zinc finger protein 76 isoform X4"
                     /calculated_mol_wt=56014
     Region          228..250
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(235,237,239,241..242,245..246,249,265,267,271..272,
                     275..276,279,295,297,299,301..302,305..306,309)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <240..427
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          258..280
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          288..310
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          318..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          348..370
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          378..400
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          408..426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..508
                     /gene="ZNF76"
                     /coded_by="XM_041466844.1:595..2121"
                     /db_xref="GeneID:121353188"
ORIGIN      
        1 melffllkar skddgpvslw apraarqdpc vgismeslgl pavtlgdsst aclqqaarge
       61 kliegqviel edgttayihq vtvqkeavaf edgqpvvled gsmafihsta kesyepstfq
      121 avqledgsta yihhpvilap gstilqvqte tglqelagee eddgldvdti nalqqygrkg
      181 sdeeeegvtd tchvkskdss nissqdlqee evqshrkgqq vgsrafrcgy kgcgrlytta
      241 hhlkvherah tgdrpytcdf pscgkafatg yglkshvrth tgekpykcpe dlcskafkts
      301 gdlqkhirth tgerpfkcpf vgcgrsftts nirkvhirth tgerpymcae pgcgrgftsa
      361 tnyknhmrih tgekpylctv pgcgkrftey sslykhhvvh thckpytcss cgktyrqtst
      421 lamhkrsshg eleateeseq alyeqqqlra aaaadrgspv esqhiaflse meedeeedav
      481 ptqislisqd gteqhffqtl ellglflp
//
LOCUS       XP_041322789             483 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 76 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322789
VERSION     XP_041322789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..483
                     /product="zinc finger protein 76 isoform X5"
                     /calculated_mol_wt=52970
     Region          228..250
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(235,237,239,241..242,245..246,249,265,267,271..272,
                     275..276,279,295,297,299,301..302,305..306,309)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <240..427
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          258..280
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          288..310
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          318..340
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          348..370
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          378..400
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          408..426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..483
                     /gene="ZNF76"
                     /coded_by="XM_041466855.1:595..2046"
                     /db_xref="GeneID:121353188"
ORIGIN      
        1 melffllkar skddgpvslw apraarqdpc vgismeslgl pavtlgdsst aclqqaarge
       61 kliegqviel edgttayihq vtvqkeavaf edgqpvvled gsmafihsta kesyepstfq
      121 avqledgsta yihhpvilap gstilqvqte tglqelagee eddgldvdti nalqqygrkg
      181 sdeeeegvtd tchvkskdss nissqdlqee evqshrkgqq vgsrafrcgy kgcgrlytta
      241 hhlkvherah tgdrpytcdf pscgkafatg yglkshvrth tgekpykcpe dlcskafkts
      301 gdlqkhirth tgerpfkcpf vgcgrsftts nirkvhirth tgerpymcae pgcgrgftsa
      361 tnyknhmrih tgekpylctv pgcgkrftey sslykhhvvh thckpytcss cgktyrqtst
      421 lamhkrsshg eleateeseq alyeqqqlrg qpvsggaagp gqchrrgdae rgprrargta
      481 gsw
//
LOCUS       XP_041322797             581 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 76 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322797
VERSION     XP_041322797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="zinc finger protein 76 isoform X2"
                     /calculated_mol_wt=62797
     Region          194..216
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(201,203,205,207..208,211..212,215,231,233,237..238,
                     241..242,245,261,263,265,267..268,271..272,275)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <206..393
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          224..246
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          254..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          284..306
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          314..336
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          344..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          374..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..581
                     /gene="ZNF76"
                     /coded_by="XM_041466863.1:150..1895"
                     /db_xref="GeneID:121353188"
ORIGIN      
        1 meslglpavt lgdsstaclq qaargeklie gqvieledgt tayihqvtvq keavafedgq
       61 pvvledgsma fihstakesy epstfqavql edgstayihh pvilapgsti lqvqtetglq
      121 elageeeddg ldvdtinalq qygrkgsdee eegvtdtchv kskdssniss qdlqeeevqs
      181 hrkgqqvgsr afrcgykgcg rlyttahhlk vherahtgdr pytcdfpscg kafatgyglk
      241 shvrthtgek pykcpedlcs kafktsgdlq khirthtger pfkcpfvgcg rsfttsnirk
      301 vhirthtger pymcaepgcg rgftsatnyk nhmrihtgek pylctvpgcg krfteyssly
      361 khhvvhthck pytcsscgkt yrqtstlamh krsshgelea teeseqalye qqqlraaaaa
      421 drgspvesqh iaflsemeed eeedavptqi slisqdgteq vslsqeelqa lgsaigvvtq
      481 sgvlavpegq laagdtgamt vastdgteaq evavvasgae eesgitplch qqvallatsh
      541 gthiavqlee qqsleealsm atavihyepv ppdtalpeqg s
//
LOCUS       XP_041322809             217 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L10a [Pyrgilauda ruficollis].
ACCESSION   XP_041322809
VERSION     XP_041322809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="60S ribosomal protein L10a"
                     /calculated_mol_wt=24570
     Region          2..217
                     /region_name="Ribosomal_L1"
                     /note="Ribosomal protein L1. The L1 protein, located near
                     the E-site of the ribosome, forms part of the L1 stalk
                     along with 23S rRNA. In bacteria and archaea, L1 functions
                     both as a ribosomal protein that binds rRNA, and as a
                     translation repressor that binds...; cl00322"
                     /db_xref="CDD:469720"
     Site            order(26..28,31,33,35,37,162,164,166,210..211,213)
                     /site_type="other"
                     /note="mRNA/rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238235"
     CDS             1..217
                     /gene="RPL10A"
                     /coded_by="XM_041466875.1:56..709"
                     /db_xref="GeneID:121353215"
ORIGIN      
        1 msskvsrdtl yeavkevlhg srakkrkfve tvelqislkn ydpqkdkrfs gtvrlkstpr
       61 pkfsvcllgd qqhcdeakav diphmdieal kklnknkklv kklakkydaf laseslikqi
      121 prilgpglnk agkfpsllth nenlvakvde vkstikfqmk kvlclavavg hvkmtedelv
      181 ynihlainfl vsllkknwqn vralyikstm gkpqrly
//
LOCUS       XP_041322811             953 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeats and immunoglobulin-like domains protein 2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322811
VERSION     XP_041322811.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466877.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..953
                     /product="leucine-rich repeats and immunoglobulin-like
                     domains protein 2 isoform X1"
                     /calculated_mol_wt=106409
     Region          18..444
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          19..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          114..137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          210..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          401..495
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          412..416
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          427..431
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          454..458
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          474..479
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          488..491
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          500..590
                     /region_name="IgI_LRIG1-like"
                     /note="Immunoglobulin (Ig)-like ectodomain of the LRIG1
                     (Leucine-rich Repeats And Immunoglobulin-like Domains
                     Protein 1) and similar proteins; member of the I-set of
                     IgSF domains; cd05763"
                     /db_xref="CDD:409420"
     Region          500..503
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409420"
     Region          507..511
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409420"
     Region          514..523
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409420"
     Region          529..534
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409420"
     Region          537..539
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409420"
     Region          547..551
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409420"
     Region          555..562
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409420"
     Region          568..576
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409420"
     Region          579..590
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409420"
     Region          593..680
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          610..614
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          623..627
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          646..650
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          660..665
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          673..676
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..953
                     /gene="LRIG2"
                     /coded_by="XM_041466877.1:1176..4037"
                     /db_xref="GeneID:121353227"
ORIGIN      
        1 mnynelseip yfgettsnit llslvhntip einaeqlqvy lslenldlss nliseikass
       61 fprmqlkyln lsnnrittle agcldnlsss lmviklnrnr isvippkifr lphvqflelk
      121 rnrikivesl tfqgleslks lkmqrngisr lmdgaffglg nieelelehn nltevnkgwl
      181 yglrtlqqly vsqnaitris pdawefcqrl aeldlsynql trlkesafvg lglleklnlg
      241 dnrinhiadg vfrgltnlqt ldlrnneisw aiedaneafv glsrldklil qgnqiksitk
      301 kafsglegle hldlsnnaim siqenafaha qlkelvlnts sllcdcqlkw lpqwlseshl
      361 lqtvsvscah pewlagqsll svdlddfvcd nfpkpqirvh pettvalrgt nvtlmctavs
      421 ssdspmataw rkdsevlyda dvesfaryqq qsgevleytt vlhlfnvnft degkyqcivt
      481 nhfgsnysnk akltvnelps flktpmdlti rtgamarlec aaeghpppqi swqkdggtdf
      541 paarerrmhv mpeddvffia nvkmedmgiy scmaqniagg lsanatltvl etpsfmrple
      601 drtvtrgeta vlqciaggsp aprlnwtkdd gpltvterhf faaanqllii vdagledagk
      661 ytcimsntlg terghiylnv laspncdssq gaivheedgw ttvgiviivv vccvvgtslv
      721 wviviyhmrr knedysitnt eemnlpadip sylssqgtls epqegysnle agshqqlmpp
      781 agsymhkgtd ggaaplvics dcydnaniys rtreycpyaf iteedpldqa lpnlmvqipk
      841 etytactqne asalgnllvd rdvpvfltnh dkktdkkiss qqiiepfqvp lwggskdlac
      901 shpqflqhpl aheasqplrs erdqasprpc rrlreesfdf drtrnirdhs ett
//
LOCUS       XP_041322820             953 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeats and immunoglobulin-like domains protein 2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322820
VERSION     XP_041322820.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466886.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..953
                     /product="leucine-rich repeats and immunoglobulin-like
                     domains protein 2 isoform X1"
                     /calculated_mol_wt=106409
     Region          18..444
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          19..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          43..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          91..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          114..137
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          138..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          210..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..282
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          285..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          309..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          401..495
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          412..416
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          427..431
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          454..458
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          474..479
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          488..491
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          500..590
                     /region_name="IgI_LRIG1-like"
                     /note="Immunoglobulin (Ig)-like ectodomain of the LRIG1
                     (Leucine-rich Repeats And Immunoglobulin-like Domains
                     Protein 1) and similar proteins; member of the I-set of
                     IgSF domains; cd05763"
                     /db_xref="CDD:409420"
     Region          500..503
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409420"
     Region          507..511
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409420"
     Region          514..523
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409420"
     Region          529..534
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409420"
     Region          537..539
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409420"
     Region          547..551
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409420"
     Region          555..562
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409420"
     Region          568..576
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409420"
     Region          579..590
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409420"
     Region          593..680
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          610..614
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          623..627
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          646..650
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          660..665
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          673..676
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..953
                     /gene="LRIG2"
                     /coded_by="XM_041466886.1:190..3051"
                     /db_xref="GeneID:121353227"
ORIGIN      
        1 mnynelseip yfgettsnit llslvhntip einaeqlqvy lslenldlss nliseikass
       61 fprmqlkyln lsnnrittle agcldnlsss lmviklnrnr isvippkifr lphvqflelk
      121 rnrikivesl tfqgleslks lkmqrngisr lmdgaffglg nieelelehn nltevnkgwl
      181 yglrtlqqly vsqnaitris pdawefcqrl aeldlsynql trlkesafvg lglleklnlg
      241 dnrinhiadg vfrgltnlqt ldlrnneisw aiedaneafv glsrldklil qgnqiksitk
      301 kafsglegle hldlsnnaim siqenafaha qlkelvlnts sllcdcqlkw lpqwlseshl
      361 lqtvsvscah pewlagqsll svdlddfvcd nfpkpqirvh pettvalrgt nvtlmctavs
      421 ssdspmataw rkdsevlyda dvesfaryqq qsgevleytt vlhlfnvnft degkyqcivt
      481 nhfgsnysnk akltvnelps flktpmdlti rtgamarlec aaeghpppqi swqkdggtdf
      541 paarerrmhv mpeddvffia nvkmedmgiy scmaqniagg lsanatltvl etpsfmrple
      601 drtvtrgeta vlqciaggsp aprlnwtkdd gpltvterhf faaanqllii vdagledagk
      661 ytcimsntlg terghiylnv laspncdssq gaivheedgw ttvgiviivv vccvvgtslv
      721 wviviyhmrr knedysitnt eemnlpadip sylssqgtls epqegysnle agshqqlmpp
      781 agsymhkgtd ggaaplvics dcydnaniys rtreycpyaf iteedpldqa lpnlmvqipk
      841 etytactqne asalgnllvd rdvpvfltnh dkktdkkiss qqiiepfqvp lwggskdlac
      901 shpqflqhpl aheasqplrs erdqasprpc rrlreesfdf drtrnirdhs ett
//
LOCUS       XP_041322830             811 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeats and immunoglobulin-like domains protein 2
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322830
VERSION     XP_041322830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..811
                     /product="leucine-rich repeats and immunoglobulin-like
                     domains protein 2 isoform X2"
                     /calculated_mol_wt=90192
     Region          <1..201
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          20..43
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          44..67
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          68..91
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          92..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          116..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          171..>248
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          252..339
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          358..448
                     /region_name="IgI_LRIG1-like"
                     /note="Immunoglobulin (Ig)-like ectodomain of the LRIG1
                     (Leucine-rich Repeats And Immunoglobulin-like Domains
                     Protein 1) and similar proteins; member of the I-set of
                     IgSF domains; cd05763"
                     /db_xref="CDD:409420"
     Region          358..361
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409420"
     Region          365..369
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409420"
     Region          372..381
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409420"
     Region          387..392
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409420"
     Region          395..397
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409420"
     Region          405..409
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409420"
     Region          413..420
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409420"
     Region          426..434
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409420"
     Region          437..448
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409420"
     Region          451..538
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          468..472
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          481..485
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          504..508
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          518..523
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          531..534
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..811
                     /gene="LRIG2"
                     /coded_by="XM_041466896.1:248..2683"
                     /db_xref="GeneID:121353227"
ORIGIN      
        1 mqrngisrlm dgaffglgni eelelehnnl tevnkgwlyg lrtlqqlyvs qnaitrispd
       61 awefcqrlae ldlsynqltr lkesafvglg lleklnlgdn rinhiadgvf rgltnlqtld
      121 lrnneiswai edaneafvgl srldklilqg nqiksitkka fsgleglehl dlsnnaimsi
      181 qenafahaql kelvlntssl lcdcqlkwlp qwlseshllq tvsvscahpe wlagqsllsv
      241 dlddfvcdnf pkpqirvhpe ttvalrgtnv tlmctavsss dspmatawrk dsevlydadv
      301 esfaryqqqs gevleyttvl hlfnvnftde gkyqcivtnh fgsnysnkak ltvnelpsfl
      361 ktpmdltirt gamarlecaa eghpppqisw qkdggtdfpa arerrmhvmp eddvffianv
      421 kmedmgiysc maqniaggls anatltvlet psfmrpledr tvtrgetavl qciaggspap
      481 rlnwtkddgp ltvterhffa aanqlliivd agledagkyt cimsntlgte rghiylnvla
      541 spncdssqga ivheedgwtt vgiviivvvc cvvgtslvwv iviyhmrrkn edysitntee
      601 mnlpadipsy lssqgtlsep qegysnleag shqqlmppag symhkgtdgg aaplvicsdc
      661 ydnaniysrt reycpyafit eedpldqalp nlmvqipket ytactqneas algnllvdrd
      721 vpvfltnhdk ktdkkissqq iiepfqvplw ggskdlacsh pqflqhplah easqplrser
      781 dqasprpcrr lreesfdfdr trnirdhset t
//
LOCUS       XP_041322844             496 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322844
VERSION     XP_041322844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466910.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="monocarboxylate transporter 1"
                     /calculated_mol_wt=53469
     Region          19..440
                     /region_name="MFS_MCT1"
                     /note="Monocarboxylate transporter 1 of the Major
                     Facilitator Superfamily of transporters; cd17426"
                     /db_xref="CDD:340984"
     Site            order(30..31,34..35,38,73,124..125,127..129,132,151,
                     154..155,158,269,272..273,276..278,281,308,312,365..366,
                     370,374,390,393..394,397..398,401)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340984"
     CDS             1..496
                     /gene="SLC16A1"
                     /coded_by="XM_041466910.1:163..1653"
                     /db_xref="GeneID:121353240"
ORIGIN      
        1 mppaiggpvg ytppeggwgw avvigafisi gfsyafpksi tvffkeievi fnassskvsw
       61 issimlavmy aggpissilv nkygsrpimi aggclsgcgl iaasfcntve elyfcvgvig
      121 glglafnlnp altmigkyff kkrplangla magspvflst lapvnqlffg ifgwrgsfli
      181 lgglllnccv agslmrpigp kpdqmkkean kevqqeagka gkkddgdtst dlidgkakke
      241 kssvfqtink fldlslfthr gfllylsgnv imffglfapl vflsnyaksk kiasdsaafl
      301 lsilafvdmv arpsmglvan tkwvrpriqy ffaisiiyng vchllvpmst syagfciyag
      361 ffgfafgwls silfetlmdl vgaqrfssav glvtiveccp vllgppmlgk lndmygdyky
      421 tywacgvvli isgiylfigm ginyrlvake ekakkegkgd etnideagkq keakndvaps
      481 pqknveggvk eeesrm
//
LOCUS       XP_041322854             496 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322854
VERSION     XP_041322854.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466920.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="monocarboxylate transporter 1"
                     /calculated_mol_wt=53469
     Region          19..440
                     /region_name="MFS_MCT1"
                     /note="Monocarboxylate transporter 1 of the Major
                     Facilitator Superfamily of transporters; cd17426"
                     /db_xref="CDD:340984"
     Site            order(30..31,34..35,38,73,124..125,127..129,132,151,
                     154..155,158,269,272..273,276..278,281,308,312,365..366,
                     370,374,390,393..394,397..398,401)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340984"
     CDS             1..496
                     /gene="SLC16A1"
                     /coded_by="XM_041466920.1:179..1669"
                     /db_xref="GeneID:121353240"
ORIGIN      
        1 mppaiggpvg ytppeggwgw avvigafisi gfsyafpksi tvffkeievi fnassskvsw
       61 issimlavmy aggpissilv nkygsrpimi aggclsgcgl iaasfcntve elyfcvgvig
      121 glglafnlnp altmigkyff kkrplangla magspvflst lapvnqlffg ifgwrgsfli
      181 lgglllnccv agslmrpigp kpdqmkkean kevqqeagka gkkddgdtst dlidgkakke
      241 kssvfqtink fldlslfthr gfllylsgnv imffglfapl vflsnyaksk kiasdsaafl
      301 lsilafvdmv arpsmglvan tkwvrpriqy ffaisiiyng vchllvpmst syagfciyag
      361 ffgfafgwls silfetlmdl vgaqrfssav glvtiveccp vllgppmlgk lndmygdyky
      421 tywacgvvli isgiylfigm ginyrlvake ekakkegkgd etnideagkq keakndvaps
      481 pqknveggvk eeesrm
//
LOCUS       XP_041322866             968 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase MOV-10 [Pyrgilauda ruficollis].
ACCESSION   XP_041322866
VERSION     XP_041322866.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466932.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..968
                     /product="helicase MOV-10"
                     /calculated_mol_wt=109149
     Region          491..729
                     /region_name="DEXXQc_Helz-like"
                     /note="DEXXQ/H-box helicase domain of Helz-like helicase;
                     cd18038"
                     /db_xref="CDD:350796"
     Site            order(496,520..525,679,728..729)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350796"
     Region          730..937
                     /region_name="SF1_C_Upf1"
                     /note="C-terminal helicase domain of Upf1-like family
                     helicases; cd18808"
                     /db_xref="CDD:350195"
     Site            order(830..832,862,864..865,880)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350195"
     Site            order(868,870,909)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350195"
     CDS             1..968
                     /gene="MOV10"
                     /coded_by="XM_041466932.1:315..3221"
                     /db_xref="GeneID:121353246"
ORIGIN      
        1 mprfsvaeas lwghqfvqfl qdtgreqtsl realraiynq efrgrtdvrt pnfscmlyal
       61 ktthqvqvrg evvkfkvtrh vvvadqyrrp rrnaqtsvst sasgqqlsst pqmpqsyakq
      121 waelirgkhg veiisdhdqg dgnirfpvep geprtvtvlv qncgtevvtl qrfqprqqaq
      181 elsftdeqga vqgqslllhp ggmypiqvrc lttcnghfsa vvffeftkep desfsisryv
      241 aavaesqlak dlrpsapfqp yeaslqrhvt vitedgippd sslknelere iplgtyhypk
      301 slkdtillgp ntsansswaa mrslleaplq aenyyqkfql llhleeiqme vdirrydmqd
      361 vtmvqdrall vldvpgvaen rpsvlrgdhl fahlsserdr splvrykgyv hsvelekvrl
      421 gfssklqkkf vnnlkfdvtf tfsrlplqvq hraavlaarr glfsllfpsa schkslfsgp
      481 fqprwfnhkl etneeqrrav thivtgvsrp apylifgppg tgktvtmvea ikqvwtcfkd
      541 ahilacapsn saadllcqcl ikdiapqnvy rliassrnyr evppdimpcc nwdheqssyv
      601 ypskktlrhy riiittlvta grlvsanfps glfshvfide cghavepesv vaiagllapm
      661 deetnpnggq lvlagdpkql gpvltsplat qyglgtslle rlmlhnplyk kssggydpqf
      721 itkllwnyrs heailripne lfydnelkvs rsdgldvrnl fctweelpkk gfpiifhgvc
      781 gedqrearsp sffntaeiev lvhylkkllq srgrgscpsv spkeigiisp yrkqvekirk
      841 avtsldpdlq klpdisqlkv gsveefqgqe rqvilistvr scstylqfdq tfrlgflknp
      901 krlnvaitra kallvvvgnp tvlskddhwl rflryckeqg gytgypyede ssaedrlane
      961 lhtlqlsv
//
LOCUS       XP_041322875             201 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoC isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322875
VERSION     XP_041322875.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466941.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="rho-related GTP-binding protein RhoC isoform X1"
                     /calculated_mol_wt=22652
     Region          13..187
                     /region_name="RhoA_like"
                     /note="Ras homology family A (RhoA)-like includes RhoA,
                     RhoB and RhoC; cd01870"
                     /db_xref="CDD:206662"
     Site            order(13,42,45..46,49,51,53,62,66..67,69..71,74,76,80)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206662"
     Site            order(23..28,42..43,45,67..68,126,128,169..170)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206662"
     Site            order(31,33..37,50..51,53..55,60..62,171..172,176..177,
                     180)
                     /site_type="active"
                     /note="PKN/PRK1 effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(42,44,46..47,71..74,77,80,102)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            42..50
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206662"
     Site            order(45..46,69,74,76..77,79..80,83,113..114,116)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            45
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206662"
     Site            order(47,73..77,80,105,109,113)
                     /site_type="active"
                     /note="Mdia effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(47..48,73..74,76..77,80)
                     /site_type="other"
                     /note="Rho kinase (ROCK) effector interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            67..70
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206662"
     Site            70..87
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206662"
     Site            125..128
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206662"
     Site            168..170
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206662"
     CDS             1..201
                     /gene="RHOC"
                     /coded_by="XM_041466941.1:371..976"
                     /db_xref="GeneID:121353254"
ORIGIN      
        1 mmsfgkgama airkklvivg dgacgktcll ivfskdqfpe vyvptvfeny iadievdgkq
       61 velalwdtag qedydrlrpl sypdtdvilm cfsidspdsl enipekwtpe vkhfcpnvpi
      121 ilvgnkkdlr ndehtrrela kmkqepvkpe egrdmanrin afgylecsak tkegvrevfe
      181 matraglqvr knkkrrgcpl l
//
LOCUS       XP_041322885             196 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoC isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322885
VERSION     XP_041322885.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466951.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..196
                     /product="rho-related GTP-binding protein RhoC isoform X2"
                     /calculated_mol_wt=22203
     Region          8..182
                     /region_name="RhoA_like"
                     /note="Ras homology family A (RhoA)-like includes RhoA,
                     RhoB and RhoC; cd01870"
                     /db_xref="CDD:206662"
     Site            order(8,37,40..41,44,46,48,57,61..62,64..66,69,71,75)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206662"
     Site            order(18..23,37..38,40,62..63,121,123,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206662"
     Site            order(26,28..32,45..46,48..50,55..57,166..167,171..172,
                     175)
                     /site_type="active"
                     /note="PKN/PRK1 effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(37,39,41..42,66..69,72,75,97)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            37..45
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206662"
     Site            order(40..41,64,69,71..72,74..75,78,108..109,111)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206662"
     Site            order(42,68..72,75,100,104,108)
                     /site_type="active"
                     /note="Mdia effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(42..43,68..69,71..72,75)
                     /site_type="other"
                     /note="Rho kinase (ROCK) effector interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            62..65
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206662"
     Site            65..82
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206662"
     Site            120..123
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206662"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206662"
     CDS             1..196
                     /gene="RHOC"
                     /coded_by="XM_041466951.1:190..780"
                     /db_xref="GeneID:121353254"
ORIGIN      
        1 mktmaairkk lvivgdgacg ktcllivfsk dqfpevyvpt vfenyiadie vdgkqvelal
       61 wdtagqedyd rlrplsypdt dvilmcfsid spdslenipe kwtpevkhfc pnvpiilvgn
      121 kkdlrndeht rrelakmkqe pvkpeegrdm anrinafgyl ecsaktkegv revfematra
      181 glqvrknkkr rgcpll
//
LOCUS       XP_041322894             193 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoC isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322894
VERSION     XP_041322894.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466960.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..193
                     /product="rho-related GTP-binding protein RhoC isoform X3"
                     /calculated_mol_wt=21842
     Region          5..179
                     /region_name="RhoA_like"
                     /note="Ras homology family A (RhoA)-like includes RhoA,
                     RhoB and RhoC; cd01870"
                     /db_xref="CDD:206662"
     Site            order(5,34,37..38,41,43,45,54,58..59,61..63,66,68,72)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            12..19
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206662"
     Site            order(15..20,34..35,37,59..60,118,120,161..162)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206662"
     Site            order(23,25..29,42..43,45..47,52..54,163..164,168..169,
                     172)
                     /site_type="active"
                     /note="PKN/PRK1 effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(34,36,38..39,63..66,69,72,94)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            34..42
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206662"
     Site            order(37..38,61,66,68..69,71..72,75,105..106,108)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            37
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206662"
     Site            order(39,65..69,72,97,101,105)
                     /site_type="active"
                     /note="Mdia effector interaction site [active]"
                     /db_xref="CDD:206662"
     Site            order(39..40,65..66,68..69,72)
                     /site_type="other"
                     /note="Rho kinase (ROCK) effector interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206662"
     Site            59..62
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206662"
     Site            62..79
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206662"
     Site            117..120
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206662"
     Site            160..162
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206662"
     CDS             1..193
                     /gene="RHOC"
                     /coded_by="XM_041466960.1:355..936"
                     /db_xref="GeneID:121353254"
ORIGIN      
        1 maairkklvi vgdgacgktc llivfskdqf pevyvptvfe nyiadievdg kqvelalwdt
       61 agqedydrlr plsypdtdvi lmcfsidspd slenipekwt pevkhfcpnv piilvgnkkd
      121 lrndehtrre lakmkqepvk peegrdmanr inafgylecs aktkegvrev fematraglq
      181 vrknkkrrgc pll
//
LOCUS       XP_041322908            1895 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322908
VERSION     XP_041322908.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466974.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1895
                     /product="plexin-A2"
                     /calculated_mol_wt=210535
     Region          38..552
                     /region_name="Sema_plexin_A2"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin A2; cd11272"
                     /db_xref="CDD:200533"
     Site            order(93,95..96,155,192..194,220..222,229..231,386,389,
                     391,394..398,408,411)
                     /site_type="other"
                     /note="Semaphorin binding site [polypeptide binding]"
                     /db_xref="CDD:200533"
     Region          565..654
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          655..702
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          708..802
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          806..856
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          859..954
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          955..1038
                     /region_name="IPT_plexin_repeat2"
                     /note="Second repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01179"
                     /db_xref="CDD:238584"
     Region          1042..1142
                     /region_name="IPT_plexin_repeat3"
                     /note="Third repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01181"
                     /db_xref="CDD:238586"
     Region          1160..1228
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1312..1860
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1895
                     /gene="PLXNA2"
                     /coded_by="XM_041466974.1:279..5966"
                     /db_xref="GeneID:121353264"
ORIGIN      
        1 mdqrrswprv ldsdgcsval lclflaslsr nvssnalfnt fhsenrdwtf nhltvhrgtg
       61 avyvgainrv yklsgnltil vahktgpeed nkscyppliv qpcsevltlt nnvnklliid
      121 ysenrllacg slyqgvckll rlddlfilve pshkkehyls svnktgtmyg vivrsegedg
      181 klfigtavdg kqdyfptlss rklprdpess amldyelhsd fvsslikips dtlalvshfd
      241 ifyiygfasg nfvyfltvqp etpegvsins asdlfytsri vrlckddpkf hsyvslpfgc
      301 vkgdteyrll qaaylskpgq vlaralnita qedvlfaifs kgqkqyhhpp ddsalcafpi
      361 rtvnahiker lqscyqgegn lelnwllgkd vqctkapvpi ddnfcgldin qplggsvpve
      421 gvtlftssrd rmtsvasyvy ngysvvfvgt ktgrlkkira dgppqggiqy evvpvfkdgs
      481 pvlrdmafss dhkylyvmse rqvsrvpves ceqyttcqec lssgdphcgw cslhhmcspr
      541 drceraeepf rfagsiaqcl svavqpssis vsehslplsl rvsdapdlsa gvsclfgnls
      601 evqgqvsgsq vvcvsppakd vpaipvdqdw fgvvlqlksr etgrtfvste fkfyncsahq
      661 lclscvnsaf rchwckyrnl cthdpttcsf qegrinvsed cpqlfpteei lipvgevkpi
      721 tlkarnlpqp qsgqrgyecv lsiqgivhrv palrfnsssv qcqnssylyd gmdisnlavd
      781 favvwngnfv idnpenlkvh lykcaaqres cglclkadpk fecgwcsgea kctlrphcgs
      841 pgalpwldws shnvkcsnpr iteiltvsgp peggtrvtir gvnlgldfse iaqgvqvagv
      901 qctplpehyi vaeqivcemg qalpgissgp vllcigeckp eftaksaqqy mfvtpavsfl
      961 spsrgpesgg tmvtisghyl gagsrvsvll gnqtcefler smneivcvsa psahglgavq
     1021 vsvsvdraql ertllfeyid dpkvqhiepe wsiasghtpl tvtgsnldvi qeprirvkhn
     1081 gkefvnvckv vnatalacla ppltaeyrpg ldaverpdef gfifnnvqsl llyndtkfiy
     1141 ypnptfemls stgvleqkpg spiilkgrnl cppapggakl nytvligetp cavtvsetql
     1201 lcepptltgq hkvvvrvggv ifspgsvsiv sdslltlpai vsiaaggsll liiviivlia
     1261 ykrksrendl tlkrlqmqmd nlesrvalec keafaelqtd ineltsdldr sgipyldyrt
     1321 yamrvlfpgi edhpvlrele vqgngqqsve kalklfaqli nnkvfllsfi rtlesqrsfs
     1381 mrdrgnvasl imtvlqskle yatdvlkqll sdlieknlen knhpklllrr tesvaekmlt
     1441 nwfafllhrf lkecageplf mlycaikqqm ekgpidaitg earyslsedk lirqqieykt
     1501 lilncvnpdn enspeipvkv lncdtitqvk ekildavykn vpysqrprav dmdlewrqgr
     1561 iarvvlqded ittkiegdwk rlntlvhyqv sdrsvvalvp kqtssynipa sasisrtsis
     1621 rydstfrytg spdslrsrap mitpdlesgv kvwhlvknhd hgdqkegdrg skmvseiylt
     1681 rllatkgtlq kfvddlfetl fstvhrgsal plaikymfdf ldeqadkhgi hdtdvrhtwk
     1741 snclplrfwv nviknpqfvf dihkgsitda clsvvaqtfm dscstsehrl gkdspsnkll
     1801 yakdipsyks wveryyadia klpaisdqdm naylaeqsrl havefnmlsa lneiysyvsk
     1861 yseeligale qdeqarrqrl aykveqliga msfes
//
LOCUS       XP_041322914            1895 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322914
VERSION     XP_041322914.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466980.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1895
                     /product="plexin-A2"
                     /calculated_mol_wt=210535
     Region          38..552
                     /region_name="Sema_plexin_A2"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin A2; cd11272"
                     /db_xref="CDD:200533"
     Site            order(93,95..96,155,192..194,220..222,229..231,386,389,
                     391,394..398,408,411)
                     /site_type="other"
                     /note="Semaphorin binding site [polypeptide binding]"
                     /db_xref="CDD:200533"
     Region          565..654
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          655..702
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          708..802
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          806..856
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          859..954
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          955..1038
                     /region_name="IPT_plexin_repeat2"
                     /note="Second repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01179"
                     /db_xref="CDD:238584"
     Region          1042..1142
                     /region_name="IPT_plexin_repeat3"
                     /note="Third repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01181"
                     /db_xref="CDD:238586"
     Region          1160..1228
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1312..1860
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1895
                     /gene="PLXNA2"
                     /coded_by="XM_041466980.1:327..6014"
                     /db_xref="GeneID:121353264"
ORIGIN      
        1 mdqrrswprv ldsdgcsval lclflaslsr nvssnalfnt fhsenrdwtf nhltvhrgtg
       61 avyvgainrv yklsgnltil vahktgpeed nkscyppliv qpcsevltlt nnvnklliid
      121 ysenrllacg slyqgvckll rlddlfilve pshkkehyls svnktgtmyg vivrsegedg
      181 klfigtavdg kqdyfptlss rklprdpess amldyelhsd fvsslikips dtlalvshfd
      241 ifyiygfasg nfvyfltvqp etpegvsins asdlfytsri vrlckddpkf hsyvslpfgc
      301 vkgdteyrll qaaylskpgq vlaralnita qedvlfaifs kgqkqyhhpp ddsalcafpi
      361 rtvnahiker lqscyqgegn lelnwllgkd vqctkapvpi ddnfcgldin qplggsvpve
      421 gvtlftssrd rmtsvasyvy ngysvvfvgt ktgrlkkira dgppqggiqy evvpvfkdgs
      481 pvlrdmafss dhkylyvmse rqvsrvpves ceqyttcqec lssgdphcgw cslhhmcspr
      541 drceraeepf rfagsiaqcl svavqpssis vsehslplsl rvsdapdlsa gvsclfgnls
      601 evqgqvsgsq vvcvsppakd vpaipvdqdw fgvvlqlksr etgrtfvste fkfyncsahq
      661 lclscvnsaf rchwckyrnl cthdpttcsf qegrinvsed cpqlfpteei lipvgevkpi
      721 tlkarnlpqp qsgqrgyecv lsiqgivhrv palrfnsssv qcqnssylyd gmdisnlavd
      781 favvwngnfv idnpenlkvh lykcaaqres cglclkadpk fecgwcsgea kctlrphcgs
      841 pgalpwldws shnvkcsnpr iteiltvsgp peggtrvtir gvnlgldfse iaqgvqvagv
      901 qctplpehyi vaeqivcemg qalpgissgp vllcigeckp eftaksaqqy mfvtpavsfl
      961 spsrgpesgg tmvtisghyl gagsrvsvll gnqtcefler smneivcvsa psahglgavq
     1021 vsvsvdraql ertllfeyid dpkvqhiepe wsiasghtpl tvtgsnldvi qeprirvkhn
     1081 gkefvnvckv vnatalacla ppltaeyrpg ldaverpdef gfifnnvqsl llyndtkfiy
     1141 ypnptfemls stgvleqkpg spiilkgrnl cppapggakl nytvligetp cavtvsetql
     1201 lcepptltgq hkvvvrvggv ifspgsvsiv sdslltlpai vsiaaggsll liiviivlia
     1261 ykrksrendl tlkrlqmqmd nlesrvalec keafaelqtd ineltsdldr sgipyldyrt
     1321 yamrvlfpgi edhpvlrele vqgngqqsve kalklfaqli nnkvfllsfi rtlesqrsfs
     1381 mrdrgnvasl imtvlqskle yatdvlkqll sdlieknlen knhpklllrr tesvaekmlt
     1441 nwfafllhrf lkecageplf mlycaikqqm ekgpidaitg earyslsedk lirqqieykt
     1501 lilncvnpdn enspeipvkv lncdtitqvk ekildavykn vpysqrprav dmdlewrqgr
     1561 iarvvlqded ittkiegdwk rlntlvhyqv sdrsvvalvp kqtssynipa sasisrtsis
     1621 rydstfrytg spdslrsrap mitpdlesgv kvwhlvknhd hgdqkegdrg skmvseiylt
     1681 rllatkgtlq kfvddlfetl fstvhrgsal plaikymfdf ldeqadkhgi hdtdvrhtwk
     1741 snclplrfwv nviknpqfvf dihkgsitda clsvvaqtfm dscstsehrl gkdspsnkll
     1801 yakdipsyks wveryyadia klpaisdqdm naylaeqsrl havefnmlsa lneiysyvsk
     1861 yseeligale qdeqarrqrl aykveqliga msfes
//
LOCUS       XP_041322922            1895 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322922
VERSION     XP_041322922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466988.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1895
                     /product="plexin-A2"
                     /calculated_mol_wt=210535
     Region          38..552
                     /region_name="Sema_plexin_A2"
                     /note="The Sema domain, a protein interacting module, of
                     Plexin A2; cd11272"
                     /db_xref="CDD:200533"
     Site            order(93,95..96,155,192..194,220..222,229..231,386,389,
                     391,394..398,408,411)
                     /site_type="other"
                     /note="Semaphorin binding site [polypeptide binding]"
                     /db_xref="CDD:200533"
     Region          565..654
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          655..702
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          708..802
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          806..856
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          859..954
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          955..1038
                     /region_name="IPT_plexin_repeat2"
                     /note="Second repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01179"
                     /db_xref="CDD:238584"
     Region          1042..1142
                     /region_name="IPT_plexin_repeat3"
                     /note="Third repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01181"
                     /db_xref="CDD:238586"
     Region          1160..1228
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1312..1860
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1895
                     /gene="PLXNA2"
                     /coded_by="XM_041466988.1:247..5934"
                     /db_xref="GeneID:121353264"
ORIGIN      
        1 mdqrrswprv ldsdgcsval lclflaslsr nvssnalfnt fhsenrdwtf nhltvhrgtg
       61 avyvgainrv yklsgnltil vahktgpeed nkscyppliv qpcsevltlt nnvnklliid
      121 ysenrllacg slyqgvckll rlddlfilve pshkkehyls svnktgtmyg vivrsegedg
      181 klfigtavdg kqdyfptlss rklprdpess amldyelhsd fvsslikips dtlalvshfd
      241 ifyiygfasg nfvyfltvqp etpegvsins asdlfytsri vrlckddpkf hsyvslpfgc
      301 vkgdteyrll qaaylskpgq vlaralnita qedvlfaifs kgqkqyhhpp ddsalcafpi
      361 rtvnahiker lqscyqgegn lelnwllgkd vqctkapvpi ddnfcgldin qplggsvpve
      421 gvtlftssrd rmtsvasyvy ngysvvfvgt ktgrlkkira dgppqggiqy evvpvfkdgs
      481 pvlrdmafss dhkylyvmse rqvsrvpves ceqyttcqec lssgdphcgw cslhhmcspr
      541 drceraeepf rfagsiaqcl svavqpssis vsehslplsl rvsdapdlsa gvsclfgnls
      601 evqgqvsgsq vvcvsppakd vpaipvdqdw fgvvlqlksr etgrtfvste fkfyncsahq
      661 lclscvnsaf rchwckyrnl cthdpttcsf qegrinvsed cpqlfpteei lipvgevkpi
      721 tlkarnlpqp qsgqrgyecv lsiqgivhrv palrfnsssv qcqnssylyd gmdisnlavd
      781 favvwngnfv idnpenlkvh lykcaaqres cglclkadpk fecgwcsgea kctlrphcgs
      841 pgalpwldws shnvkcsnpr iteiltvsgp peggtrvtir gvnlgldfse iaqgvqvagv
      901 qctplpehyi vaeqivcemg qalpgissgp vllcigeckp eftaksaqqy mfvtpavsfl
      961 spsrgpesgg tmvtisghyl gagsrvsvll gnqtcefler smneivcvsa psahglgavq
     1021 vsvsvdraql ertllfeyid dpkvqhiepe wsiasghtpl tvtgsnldvi qeprirvkhn
     1081 gkefvnvckv vnatalacla ppltaeyrpg ldaverpdef gfifnnvqsl llyndtkfiy
     1141 ypnptfemls stgvleqkpg spiilkgrnl cppapggakl nytvligetp cavtvsetql
     1201 lcepptltgq hkvvvrvggv ifspgsvsiv sdslltlpai vsiaaggsll liiviivlia
     1261 ykrksrendl tlkrlqmqmd nlesrvalec keafaelqtd ineltsdldr sgipyldyrt
     1321 yamrvlfpgi edhpvlrele vqgngqqsve kalklfaqli nnkvfllsfi rtlesqrsfs
     1381 mrdrgnvasl imtvlqskle yatdvlkqll sdlieknlen knhpklllrr tesvaekmlt
     1441 nwfafllhrf lkecageplf mlycaikqqm ekgpidaitg earyslsedk lirqqieykt
     1501 lilncvnpdn enspeipvkv lncdtitqvk ekildavykn vpysqrprav dmdlewrqgr
     1561 iarvvlqded ittkiegdwk rlntlvhyqv sdrsvvalvp kqtssynipa sasisrtsis
     1621 rydstfrytg spdslrsrap mitpdlesgv kvwhlvknhd hgdqkegdrg skmvseiylt
     1681 rllatkgtlq kfvddlfetl fstvhrgsal plaikymfdf ldeqadkhgi hdtdvrhtwk
     1741 snclplrfwv nviknpqfvf dihkgsitda clsvvaqtfm dscstsehrl gkdspsnkll
     1801 yakdipsyks wveryyadia klpaisdqdm naylaeqsrl havefnmlsa lneiysyvsk
     1861 yseeligale qdeqarrqrl aykveqliga msfes
//
LOCUS       XP_041322935             812 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1J [Pyrgilauda ruficollis].
ACCESSION   XP_041322935
VERSION     XP_041322935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467001.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..812
                     /product="protein phosphatase 1J"
                     /calculated_mol_wt=88452
     Region          <14..380
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          404..805
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(414,418..419,456..458,735,796)
                     /site_type="active"
                     /db_xref="CDD:238083"
     Region          <614..>679
                     /region_name="Cas12d"
                     /note="type V CRISPR-associated protein Cas12d; NF033951"
                     /db_xref="CDD:468262"
     CDS             1..812
                     /gene="PPM1J"
                     /coded_by="XM_041467001.1:1..2439"
                     /db_xref="GeneID:121353282"
ORIGIN      
        1 mdklmtpewd cprgpcppll pespvtgrra epaplnsgqg pcraphrpre prraagerdt
       61 pgaldrtaep wtgtpvppal agtpipaapr lpgprrdpas prsgarhrgg sgpgaavsfp
      121 paklstrtcr wprcgrgptl pmaggrcapg qrrlrgpqpp gaahrhrllp pgdrprdpgw
      181 hrhrhrllpp gdrprdpgwh rhrhrllppg drprdpgwhr hrhrllppsr drprdpglap
      241 apaahralaa aparegaapp rsapvpvkav geeeqaagye qpgtatrglm saagvakrpa
      301 lhgeavpdst ststrlrdng ggfiaregsf ssrlglgagp gaqppadprg ggagaargsp
      361 ppaafcrpaf lqltpeelrr addhagravq sprdgrrrlp wstgyaevin agksqhnedq
      421 accevvfveq rpsprgsgel dggrkgfyfh ywalfdghag sgaavmaser lhlhiceqlr
      481 dlveilqdps pppvclphda qtgsadpnhv shaeergevl ndavprfhle kavsheslvi
      541 gaienafkhm deqiereraa qhlpggccal aaiylmgkfy vanagdsrai iirngeiipm
      601 sreftpeter qrlqflallr pellgkefth lefprrvqpk elgkkmlyrd qdmngwaykk
      661 ieeddlkfpl ifgegkkarm matigvtrgl gdhdlkvfss nihikpflsc fpevrvydlt
      721 qyehcpddvl vlgtdglwdv tndkevagvv mevltsyepn dpcrytmvaq elvvrsrgvl
      781 kergwrland klgsgddisv fviplggpgn yt
//
LOCUS       XP_041322949             378 aa            linear   VRT 06-MAY-2021
DEFINITION  methylosome protein 50 [Pyrgilauda ruficollis].
ACCESSION   XP_041322949
VERSION     XP_041322949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467015.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="methylosome protein 50"
                     /calculated_mol_wt=39781
     Region          <72..358
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          120..157
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          164..200
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          207..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          251..288
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          296..330
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..378
                     /gene="WDR77"
                     /coded_by="XM_041467015.1:1..1137"
                     /db_xref="GeneID:121353288"
ORIGIN      
        1 maarlsrerg eggrgagala rgggggrppa ppdgaapaas ldgdpaaeaa aewnippnap
       61 acmerhlera hyradgalll gasglngrcw tgslwvfaep rrapsegfct agvqteagva
      121 dlcwladrgi lvasdsgave lweleenesl ivnkfckyeh ddivtsvsvl agssqavsgg
      181 rdccvkvwdi peqtvlhsyr ahsdavtcva scpgkdtvfl scaednrtll wdtrcpkpat
      241 rivcsacnyl ptsvmwhpqk sdifvlgdes gtvalvdtkn pdsalsaavh trgitgfafs
      301 ahsspllasi sedcsvavld sdlsevfrnh shrdfvkgls wspsddallt tvgwdhqvlh
      361 htvplpagea sgincvke
//
LOCUS       XP_041322964             166 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0739 protein C1orf74 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322964
VERSION     XP_041322964.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467030.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..166
                     /product="UPF0739 protein C1orf74 homolog"
                     /calculated_mol_wt=17344
     Region          <12..166
                     /region_name="DUF4504"
                     /note="Domain of unknown function (DUF4504); pfam14953"
                     /db_xref="CDD:464399"
     CDS             1..166
                     /gene="CUNH1orf74"
                     /coded_by="XM_041467030.1:1..501"
                     /db_xref="GeneID:121353292"
ORIGIN      
        1 mlltpspssa avdvsaarrg pqlcapaear avrrhlaall ghlrdaeans aepvtasevv
       61 asgwnlctva gvllgypavy tfaegaencl altplrlfta rascprikdg lrvqiysfsv
      121 peslcaelgd vldawcqelk eafsaqsdfv dlcissevvs lpaval
//
LOCUS       XP_041322975             512 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF3-interacting JNK-activating modulator [Pyrgilauda ruficollis].
ACCESSION   XP_041322975
VERSION     XP_041322975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467041.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..512
                     /product="TRAF3-interacting JNK-activating modulator"
                     /calculated_mol_wt=57710
     Region          11..>175
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          184..228
                     /region_name="CC1_T3JAM"
                     /note="first coiled-coil (CC1) domain found in
                     TRAF3-interacting JNK-activating modulator; cd21912"
                     /db_xref="CDD:409288"
     Site            order(195,198..199,202,205..206,209,213,216,219..220,
                     223..224,226..227)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:409288"
     Region          <275..>497
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..512
                     /gene="TRAF3IP3"
                     /coded_by="XM_041467041.1:365..1903"
                     /db_xref="GeneID:121353299"
ORIGIN      
        1 mrraagacsc prapgsapra gqepgtgqrp rgdkatmprr arprpgesye erserrqaar
       61 prgrdsavpc crparrpapp atsprqaqfl rrrnlaaepg etppghepea atplersptv
      121 epgasallqh prscptlppa qsllslsspr argdsvttqg tqtlpspspg vtdssqqtdw
      181 giavlnkemv qlsnylkeal hrelllkqkm vilqellstl lqasekswqg qlnedklrck
      241 lrvlenqlqa ctqsyskecv kkiliemedq kqtyeqkake alqkmledkl lteqklqnsq
      301 rslaemresl alwkehnatl kaeltketta htelrnsfqa lqselqrada qsqrlsrelr
      361 alrdertell qrasalrgdn drqaghirhi qdklqkeqeq kvtleatish lqnliqnqtn
      421 qqksqqvtvq rtdqvfttqt ppltpakekq kalsehpeee eeeeeeeeee egteslqdem
      481 qkrtsqltak enevlqqhlp iihvqaqtqc rp
//
LOCUS       XP_041322988            2744 aa            linear   VRT 06-MAY-2021
DEFINITION  complement receptor type 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322988
VERSION     XP_041322988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467054.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2744
                     /product="complement receptor type 1"
                     /calculated_mol_wt=295283
     Region          97..157
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(107,129)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          157..>352
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <633..716
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          677..930
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          828..1052
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          1067..1298
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          1297..1548
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          1445..1670
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          1676..1732
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(1686,1706)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1732..2042
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          <2064..2240
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2302..2554
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2499..>2612
                     /region_name="PHA02817"
                     /note="EEV Host range protein; Provisional"
                     /db_xref="CDD:165167"
     Region          2629..2682
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2635,2655)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..2744
                     /gene="CR1"
                     /coded_by="XM_041467054.1:177..8411"
                     /db_xref="GeneID:121353306"
ORIGIN      
        1 mpgvpgtahp arstpspaph rapgfrqslp gaelssaelg wpggtgggsa elgaaprerl
       61 rcpgsaggpa mgsgrrcsll llplllllll paawgdcgpl pnishaeprg dtkhqqsfsv
      121 gstvtfgcvp gytklpflsd tirclpnsrw sslpefcgrs cprprsvsfa aispedkmqn
      181 fyavnttvry icrqgfentt aqpptstcld nltwtevpkl cqkkscgvpa npehgqvilk
      241 ehqlgatarv vcdrgyrlkg aspsiscllq gdkavwsplp acqviscppp paiprgqhsg
      301 nssgdfvlgs vttytcepgl elvgedtlrc tgdtgdsgds gtwsgtppac rvkttaetnq
      361 tkpseenpyw lasilipsci vppvalgila giimrrkene khsynvnlqk qemkgrdaam
      421 hpevtdekkh pkpwnsyfch tgnchvcpsc eeqlhsdlap lsepphrgca tcqdwlssqk
      481 prsysvpsig agdsqspagt sspakavdvl radgtgeaap wwseaeqpmd hqsdhicpvc
      541 eswlrahagd ssavtpgewr dkgpqgpvcp pctdrqllsl vqgdtasspv cplagegtpa
      601 hlvplhspgc hlcpvcsvpt hahlcqpqrl apdgmvptft lcllgscall lsttpgaqaa
      661 rcpfprvlyg rvsprrssyw trdtvsvtcn pgyalqgpgs stckatsrwd pplpqckkev
      721 tcprppsian glhsghsrds fsrgvtvsys cregfellgn asitctsiag ftmgmsvkys
      781 cnpgyylvgn aavscrasgn wsqprprcqe vtcprppsia nglhsghsrd sfsrgvtvsy
      841 scregfellg nasitctdsg lwsrplprce aigcqvpevq ngkvhnvqst yragdtlrfg
      901 cdsgyttegs dearcqpggv wdppllvcqr vrpcpmppev angnhngrsi agftmgmsvk
      961 yscnpgyylv gnaavscras gnwsqprprc qgtvcinpiv angrqvgghg llsapgqtvt
     1021 frchdgyslq gsasvscqed gswqppapvc dralphhnsf trspgacgap trlqfaelne
     1081 ehrnafdfpv gktvqytclp gyakvpgmsp tmtclesgvw sealefwkqc shpgepvngk
     1141 iisltnlqlg stvvysceeg sarvggilfp gshlggipce pppdipngqh sgellsefhy
     1201 gtavtytcnr gfplhgqpsi hcttrdgrng vwseplpacg eancpvpqiq hgrivaarsa
     1261 yahrdtvtle cdpgyairgh reiqcqpnnt weppvpvceq agcraparlg faelkepyrd
     1321 qtvfpegsrv efvcqpgysq lpgvsaaitc lrnqtwsaal efcqsvtcaa ppaipqgths
     1381 ggsrdtfslg dvvtyscasg lapagdaslt ctsadgergt wsgavprcqe vrcpvppsia
     1441 ngqhgaspga whspgsvvly tcaegysllg nasirctarg twsrpqprcr atgctkpeie
     1501 ngkvtgsett yslediivfe cnfgyalkgs qesqcqfggk whppvpscek lppcpsppii
     1561 rngqhdskgv tefipgmavk yrcdpgyvlt gkttisclps gvwsipyprc evitcsspsi
     1621 kdgevaegrr avyhpgdnvt fqchpgfvlr gsrgakcqpd shwvpavptc qpvrlcpppp
     1681 viahatlsaq pgmnftsgts vsyscqpgfs llgdpsvlct awgnwslpyp rcaagcgtpt
     1741 pllfaelseq yenqtefpvg msvnytcrpg yveqpqispt itclenltws eaqefckmlq
     1801 cpsppnidkg shdsqdlevf ptgmvvnysc dpgyslrgea siyctdsgnw slplpqcagg
     1861 cgappnltfa eltreyknqq efavgdtvsy scrpghsrrl gvpqtltclq nhtwsealef
     1921 ckrkqcrhpe pprngrvvvl tdllfgstvs htcdegyrlv gqshrrceil grhvgwtglp
     1981 picqrvvcpa pqihsgrvav pkprytygds vtfkcrrgft lrghptsqcr gdrrwhpplp
     2041 vceqdgvser yhhpdtttkp alhcskpadi thgsfrgpak avftvgtsvn yicepgfsll
     2101 gtasiyctas gawshpppvc qavncqqppn itngrlkgns satfppgaav syscdpgysl
     2161 vgnafinctg sgswsqplpq ckeircefpd vqgvkkaikg ntyrsgtnit lecdegymle
     2221 gvshtqcqed fswdppvpac kltspkpgsv glgvaaaavl lllgagvvwk iiskqkegyy
     2281 htyenynyrt plnpdtehkg scacprperl qyaeldessr eiqdfppgtk isftcrpgyv
     2341 rlpgkaltwt cgedlewspk gvfctarkci ypgdlengyf dptdltfgsk ltfhckegyr
     2401 lrgkgeiscd ikngdvgwsg vlpyceripc epppkiangd yeerasyvyq ssvtyrcqdv
     2461 pkgsdpfsli gsdtihctsd ehsngvwsgp ppecrvvkce dprvengrkk sgfgltyryk
     2521 dsvvfecnqg yflvgaevit ceenntwdpp kptcekitad vcpapeipng vlipgkpaya
     2581 kgesvqircn agcsfpggsa emtvtcqeqs swgalqhctc epegsgstpv isygrviagq
     2641 kpsyfvgdfi tiecytgytl hgeariqyig nnhwepavpt cqlsgyiiai icvivvvvvl
     2701 laafwiykkf fsqngsytvd esckeicilk tnvpaemeet aqmn
//
LOCUS       XP_041322999             665 aa            linear   VRT 06-MAY-2021
DEFINITION  lysine-specific demethylase 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041322999
VERSION     XP_041322999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467065.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..665
                     /product="lysine-specific demethylase 9"
                     /calculated_mol_wt=74690
     CDS             1..665
                     /gene="RSBN1"
                     /coded_by="XM_041467065.1:1..1998"
                     /db_xref="GeneID:121353315"
ORIGIN      
        1 mvidpmetkp iafppssrgp rdprrahapp plfpnytsqg aprrrvrgga qrsghlnvce
       61 ggpemaaqva avprapeepp ppsadrparp rgtlifslls lpetpdengk tqradslimk
      121 kikkkkkkkh redvrgkrlk mynkevqtvc agltridket lsqgqcdnle mskesfrylk
      181 deqlcrlnlg mqeyrvpqgv qtpfvthqeh svrssflktg tkfsnfihee hqsnggalvl
      241 haymdelsfl spvemerfae eflalsfsen dknaayyala ivhgaaaylp dfldyfafnf
      301 pntpvkmeil gkkdiettti snfhsqvnrt yccgtyragp mrqislvgav deevgdyfpe
      361 fldmleespf lrmtlpwgtl sslrlqcrsq sddgpimwvr pgeqmiptad mpkspfkrrr
      421 smneiknlqy lprtseprev lfedrtraha dhvgqgfdwq staavgvlka vqfgewsdqp
      481 ritkdvvcfh aedftdvvqr lqldlheppv sqcvqwvdea klnqmrregi ryariqlcdn
      541 diyfiprnvi hqfktvsavc slawhirlkq yhpvgetspk aesnsslnsd vpgnteaege
      601 pqgvsvkies eepgmeiqlt pgvlsssvss isglvqadqv aqplpgfkie sdqqhnpqdh
      661 agssv
//
LOCUS       XP_041323009             506 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323009
VERSION     XP_041323009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467075.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..506
                     /product="peptidyl-prolyl cis-trans isomerase FKBP5"
                     /calculated_mol_wt=55708
     Region          115..202
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          315..>452
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          317..360
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          368..394
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(370..371,374..375,377,401,404..405,408..409,
                     411..412,435,438..439,442..443,446)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          399..429
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..506
                     /gene="FKBP5"
                     /coded_by="XM_041467075.1:18..1538"
                     /db_xref="GeneID:121353325"
ORIGIN      
        1 mrreqggaga rggaagpggr agplgagrrr qrrqrrqprp qvfprcvsgp glslhlqtfs
       61 kdcmvarske tmttdeatks egevqaaala ergeditpsk drgvlkiikr pgsedespmi
      121 gdkvyvhykg klangkkfds srdrnepfif slgkgqvika wdigvatmkk geicyllckp
      181 eyaygsagsa pkipsnatlf feaskagelp pcpscpsavh legfcggrrf dckdvkfvvg
      241 egedhdipig idkalekmqr gehcilylsp rygfgeagkp kfgiqgnael vyevtlksfe
      301 kakeswemdt kekleqaavv kekgtmyfke gkylqaviqy gkivswleme yglsekeska
      361 sdsfllaafl nlamcylklr eyakaveccd kalgldqdne kglyrrgear llmnefelak
      421 cdfqkvlevn pqnkaaksqi svcqkktkeh nerdrriyan mftkfaerda keaasktgve
      481 ktaekavcgk gpktpgaege eaeghv
//
LOCUS       XP_041323022             406 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol 1,4,5-triphosphate receptor associated 2-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323022
VERSION     XP_041323022.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467088.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..406
                     /product="inositol 1,4,5-triphosphate receptor associated
                     2-like"
                     /calculated_mol_wt=44720
     Region          <110..>313
                     /region_name="MRVI1"
                     /note="MRVI1 protein; pfam05781"
                     /db_xref="CDD:461738"
     CDS             1..406
                     /gene="LOC121353333"
                     /coded_by="XM_041467088.1:1..1221"
                     /db_xref="GeneID:121353333"
ORIGIN      
        1 mkaldgsspg qgeeeapgpa qgrrrrqrqr ascrpspspr rsggggsqsg tgteqaveda
       61 regpreqqae laglppspde gaetleepll slpselsvld rlglhrvalt eqdleaafah
      121 lalafrcdvf tlqqrvqvek rardaaeeni qeelgqcraa lerlgrscan agcketlqql
      181 qhnlavlsaa veratsaaek lgavhqearm sraaevmvqh venlkrhhqr ehaeleemkr
      241 liqqnsrnrq laetqddvep rlrphplkrt fqqgsarrrv siavipkqll pgaspesraa
      301 pagdlepega qrwpstqrre lepqdstvte klvaeadgrg ssagneepeq lgltskgsaa
      361 elwrpwlffp qhywlffwll llsiaflllv rvlelqrvqs aasska
//
LOCUS       XP_041323031             355 aa            linear   VRT 06-MAY-2021
DEFINITION  green-sensitive opsin [Pyrgilauda ruficollis].
ACCESSION   XP_041323031
VERSION     XP_041323031.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467097.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="green-sensitive opsin"
                     /calculated_mol_wt=39806
     Region          3..37
                     /region_name="Rhodopsin_N"
                     /note="Amino terminal of the G-protein receptor rhodopsin;
                     pfam10413"
                     /db_xref="CDD:313611"
     Region          43..317
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          43..64
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          73..95
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          111..133
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          201..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          251..273
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          285..310
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..355
                     /gene="LOC121353343"
                     /coded_by="XM_041467097.1:74..1141"
                     /db_xref="GeneID:121353343"
ORIGIN      
        1 mngteginfy vpmsnktgvv rspfeypqyy laepwkyrlv ccyifflist gfpinfltll
       61 vtfkhkklrq plnyilvnla vadlcmacfg ftvtfytawn gyfvfgptgc avegffatlg
      121 gqvalwslvv laieryivic kpmgnfrfsa shaimgiaft wvmaiscaap plfgwsryip
      181 egmqcscgpd yythnpdfhn esyvlymfii hfiipvviif fsygrlvckv reaaaqqqes
      241 attqkaekev trmvilmvlg fmlawtpyav vafwiftnkg adftatlmav paffsksssl
      301 ynpiiyvlmn kqfrncmitt iccgknpfgd eetsstvsqs ktevssvsss qvspa
//
LOCUS       XP_041323044            1222 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain and PHD finger-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323044
VERSION     XP_041323044.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467110.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1222
                     /product="bromodomain and PHD finger-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=138422
     Region          209..689
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          664..761
                     /region_name="Bromo_brd1_like"
                     /note="Bromodomain; brd1_like subfamily. BRD1 is a
                     mammalian gene which encodes for a nuclear protein assumed
                     to be a transcriptional regulator. BRD1 has been
                     implicated with brain development and susceptibility to
                     schizophrenia and bipolar affective disorder; cd05512"
                     /db_xref="CDD:99944"
     Site            order(689,694,697,736,740,746)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     Region          1091..1208
                     /region_name="PWWP_BRPF3"
                     /note="PWWP domain found in bromodomain and PHD
                     finger-containing protein 3 (BRPF3); cd20158"
                     /db_xref="CDD:438986"
     Site            order(1104,1107,1127..1129,1154..1155,1157,1159..1163)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438986"
     Site            1105..1108
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438986"
     CDS             1..1222
                     /gene="BRPF3"
                     /coded_by="XM_041467110.1:146..3814"
                     /db_xref="GeneID:121353350"
ORIGIN      
        1 mahpiccwal slylklhpqp vshpprsrgr vpvhlpcltw fqqyqgidkd rdpcmcqdkq
       61 lcdiswapth fivginggvr tinpwqvlwt tgmrkprrrc rqhlegrrsp spyslkcsps
      121 retltyaqaq rivevdidgr lhrisiydpl klitedelta qditecnsnk enseqplfts
      181 ksrktpskgk kkescskhap gislhlpqpk frvvdsfrqp dapplpaayy ryiekppedl
      241 dveveydmde edlawlemvn ekrradgygt vsadtfellv drlekesyle srnngaqqsl
      301 idedafccvc mddechnsnv ilfcdicnla vhqecygvpy ipegqwlcrc clqspsrpvd
      361 cvlcpnkgga fkqtsdgrwa hvvcaiwipe vcfantvfle pieginnipp arwkltccic
      421 kqkgmgaaiq chkvncytaf hvtcaqragl fmkiepmret singttftvr ktayceshsp
      481 pgtvrrgcpa aggdwqevtv keeeeeevns gplkgsvkkn qvklkqkikk epgdvtkgrs
      541 smpvvtvaqi psyrlnkics glslqrknqf mqrlhnywll krqarngvpl irrlhshlqs
      601 qrnaeqkeqd ektsavkeel kywqklrhdl erarllieli rkreklkreq vkvqqaamel
      661 qltpfnvllr ttldllqekd aaqiftepvn lnevpdylef isnpmdfstm rrkleshlyr
      721 tldefeedfn livancmryn akdtifhraa vrlrdlggai lrharrqads igfdtavgih
      781 lpespkphdf yrfswedvdn illpenrahl sleaqlkell ekldtvssmr ssgartrrir
      841 llrreinsir hklaqqqska lpngdavpre gletasregd eegekgdgak lpypptlept
      901 gpaptlseld slqdpptlkp isesrslnql qrrmvsdrel fdkkalqqes qafqrllsnn
      961 glnglalppa dsaaspalss vgrrtsvlfk kakngvklqr glecslenge ehrqggqhsp
     1021 scpdgerqar krsalgsglv feacsglvpp krsrgkpals rvpllegvng dsdfsgsgrp
     1081 llmsfesqae leplelvwak crgypsypal iidpkmpreg llhngvpipv ppmdvlklge
     1141 qrqteagekl flvlffdnkr twqwlprdkv fplgvddtvd klkmmegrkt sirksvqvay
     1201 dramihlsrv qgdnpfipat yl
//
LOCUS       XP_041323058            1130 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain and PHD finger-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323058
VERSION     XP_041323058.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467124.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1130
                     /product="bromodomain and PHD finger-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=127878
     Region          117..597
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          572..669
                     /region_name="Bromo_brd1_like"
                     /note="Bromodomain; brd1_like subfamily. BRD1 is a
                     mammalian gene which encodes for a nuclear protein assumed
                     to be a transcriptional regulator. BRD1 has been
                     implicated with brain development and susceptibility to
                     schizophrenia and bipolar affective disorder; cd05512"
                     /db_xref="CDD:99944"
     Site            order(597,602,605,644,648,654)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     Region          999..1116
                     /region_name="PWWP_BRPF3"
                     /note="PWWP domain found in bromodomain and PHD
                     finger-containing protein 3 (BRPF3); cd20158"
                     /db_xref="CDD:438986"
     Site            order(1012,1015,1035..1037,1062..1063,1065,1067..1071)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438986"
     Site            1013..1016
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438986"
     CDS             1..1130
                     /gene="BRPF3"
                     /coded_by="XM_041467124.1:191..3583"
                     /db_xref="GeneID:121353350"
ORIGIN      
        1 mrkprrrcrq hlegrrspsp yslkcspsre tltyaqaqri vevdidgrlh risiydplkl
       61 itedeltaqd itecnsnken seqplftsks rktpskgkkk escskhapgi slhlpqpkfr
      121 vvdsfrqpda pplpaayyry iekppedldv eveydmdeed lawlemvnek rradgygtvs
      181 adtfellvdr lekesylesr nngaqqslid edafccvcmd dechnsnvil fcdicnlavh
      241 qecygvpyip egqwlcrccl qspsrpvdcv lcpnkggafk qtsdgrwahv vcaiwipevc
      301 fantvflepi eginnippar wkltccickq kgmgaaiqch kvncytafhv tcaqraglfm
      361 kiepmretsi ngttftvrkt ayceshsppg tvrrgcpaag gdwqevtvke eeeeevnsgp
      421 lkgsvkknqv klkqkikkep gdvtkgrssm pvvtvaqips yrlnkicsgl slqrknqfmq
      481 rlhnywllkr qarngvplir rlhshlqsqr naeqkeqdek tsavkeelky wqklrhdler
      541 arllielirk reklkreqvk vqqaamelql tpfnvllrtt ldllqekdaa qiftepvnln
      601 evpdylefis npmdfstmrr kleshlyrtl defeedfnli vancmrynak dtifhraavr
      661 lrdlggailr harrqadsig fdtavgihlp espkphdfyr fswedvdnil lpenrahlsl
      721 eaqlkellek ldtvssmrss gartrrirll rreinsirhk laqqqskalp ngdavpregl
      781 etasregdee gekgdgaklp ypptleptgp aptlseldsl qdpptlkpis esrslnqlqr
      841 rmvsdrelfd kkalqqesqa fqrllsnngl nglalppads aaspalssvg rrtsvlfkka
      901 kngvklqrgl ecslengeeh rqggqhspsc pdgerqarkr salgsglvfe acsglvppkr
      961 srgkpalsrv pllegvngds dfsgsgrpll msfesqaele plelvwakcr gypsypalii
     1021 dpkmpregll hngvpipvpp mdvlklgeqr qteageklfl vlffdnkrtw qwlprdkvfp
     1081 lgvddtvdkl kmmegrktsi rksvqvaydr amihlsrvqg dnpfipatyl
//
LOCUS       XP_041323066            1130 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain and PHD finger-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323066
VERSION     XP_041323066.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467132.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1130
                     /product="bromodomain and PHD finger-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=127878
     Region          117..597
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          572..669
                     /region_name="Bromo_brd1_like"
                     /note="Bromodomain; brd1_like subfamily. BRD1 is a
                     mammalian gene which encodes for a nuclear protein assumed
                     to be a transcriptional regulator. BRD1 has been
                     implicated with brain development and susceptibility to
                     schizophrenia and bipolar affective disorder; cd05512"
                     /db_xref="CDD:99944"
     Site            order(597,602,605,644,648,654)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     Region          999..1116
                     /region_name="PWWP_BRPF3"
                     /note="PWWP domain found in bromodomain and PHD
                     finger-containing protein 3 (BRPF3); cd20158"
                     /db_xref="CDD:438986"
     Site            order(1012,1015,1035..1037,1062..1063,1065,1067..1071)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438986"
     Site            1013..1016
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438986"
     CDS             1..1130
                     /gene="BRPF3"
                     /coded_by="XM_041467132.1:141..3533"
                     /db_xref="GeneID:121353350"
ORIGIN      
        1 mrkprrrcrq hlegrrspsp yslkcspsre tltyaqaqri vevdidgrlh risiydplkl
       61 itedeltaqd itecnsnken seqplftsks rktpskgkkk escskhapgi slhlpqpkfr
      121 vvdsfrqpda pplpaayyry iekppedldv eveydmdeed lawlemvnek rradgygtvs
      181 adtfellvdr lekesylesr nngaqqslid edafccvcmd dechnsnvil fcdicnlavh
      241 qecygvpyip egqwlcrccl qspsrpvdcv lcpnkggafk qtsdgrwahv vcaiwipevc
      301 fantvflepi eginnippar wkltccickq kgmgaaiqch kvncytafhv tcaqraglfm
      361 kiepmretsi ngttftvrkt ayceshsppg tvrrgcpaag gdwqevtvke eeeeevnsgp
      421 lkgsvkknqv klkqkikkep gdvtkgrssm pvvtvaqips yrlnkicsgl slqrknqfmq
      481 rlhnywllkr qarngvplir rlhshlqsqr naeqkeqdek tsavkeelky wqklrhdler
      541 arllielirk reklkreqvk vqqaamelql tpfnvllrtt ldllqekdaa qiftepvnln
      601 evpdylefis npmdfstmrr kleshlyrtl defeedfnli vancmrynak dtifhraavr
      661 lrdlggailr harrqadsig fdtavgihlp espkphdfyr fswedvdnil lpenrahlsl
      721 eaqlkellek ldtvssmrss gartrrirll rreinsirhk laqqqskalp ngdavpregl
      781 etasregdee gekgdgaklp ypptleptgp aptlseldsl qdpptlkpis esrslnqlqr
      841 rmvsdrelfd kkalqqesqa fqrllsnngl nglalppads aaspalssvg rrtsvlfkka
      901 kngvklqrgl ecslengeeh rqggqhspsc pdgerqarkr salgsglvfe acsglvppkr
      961 srgkpalsrv pllegvngds dfsgsgrpll msfesqaele plelvwakcr gypsypalii
     1021 dpkmpregll hngvpipvpp mdvlklgeqr qteageklfl vlffdnkrtw qwlprdkvfp
     1081 lgvddtvdkl kmmegrktsi rksvqvaydr amihlsrvqg dnpfipatyl
//
LOCUS       XP_041323075            1130 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain and PHD finger-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323075
VERSION     XP_041323075.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467141.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1130
                     /product="bromodomain and PHD finger-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=127878
     Region          117..597
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          572..669
                     /region_name="Bromo_brd1_like"
                     /note="Bromodomain; brd1_like subfamily. BRD1 is a
                     mammalian gene which encodes for a nuclear protein assumed
                     to be a transcriptional regulator. BRD1 has been
                     implicated with brain development and susceptibility to
                     schizophrenia and bipolar affective disorder; cd05512"
                     /db_xref="CDD:99944"
     Site            order(597,602,605,644,648,654)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99944"
     Region          999..1116
                     /region_name="PWWP_BRPF3"
                     /note="PWWP domain found in bromodomain and PHD
                     finger-containing protein 3 (BRPF3); cd20158"
                     /db_xref="CDD:438986"
     Site            order(1012,1015,1035..1037,1062..1063,1065,1067..1071)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438986"
     Site            1013..1016
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438986"
     CDS             1..1130
                     /gene="BRPF3"
                     /coded_by="XM_041467141.1:140..3532"
                     /db_xref="GeneID:121353350"
ORIGIN      
        1 mrkprrrcrq hlegrrspsp yslkcspsre tltyaqaqri vevdidgrlh risiydplkl
       61 itedeltaqd itecnsnken seqplftsks rktpskgkkk escskhapgi slhlpqpkfr
      121 vvdsfrqpda pplpaayyry iekppedldv eveydmdeed lawlemvnek rradgygtvs
      181 adtfellvdr lekesylesr nngaqqslid edafccvcmd dechnsnvil fcdicnlavh
      241 qecygvpyip egqwlcrccl qspsrpvdcv lcpnkggafk qtsdgrwahv vcaiwipevc
      301 fantvflepi eginnippar wkltccickq kgmgaaiqch kvncytafhv tcaqraglfm
      361 kiepmretsi ngttftvrkt ayceshsppg tvrrgcpaag gdwqevtvke eeeeevnsgp
      421 lkgsvkknqv klkqkikkep gdvtkgrssm pvvtvaqips yrlnkicsgl slqrknqfmq
      481 rlhnywllkr qarngvplir rlhshlqsqr naeqkeqdek tsavkeelky wqklrhdler
      541 arllielirk reklkreqvk vqqaamelql tpfnvllrtt ldllqekdaa qiftepvnln
      601 evpdylefis npmdfstmrr kleshlyrtl defeedfnli vancmrynak dtifhraavr
      661 lrdlggailr harrqadsig fdtavgihlp espkphdfyr fswedvdnil lpenrahlsl
      721 eaqlkellek ldtvssmrss gartrrirll rreinsirhk laqqqskalp ngdavpregl
      781 etasregdee gekgdgaklp ypptleptgp aptlseldsl qdpptlkpis esrslnqlqr
      841 rmvsdrelfd kkalqqesqa fqrllsnngl nglalppads aaspalssvg rrtsvlfkka
      901 kngvklqrgl ecslengeeh rqggqhspsc pdgerqarkr salgsglvfe acsglvppkr
      961 srgkpalsrv pllegvngds dfsgsgrpll msfesqaele plelvwakcr gypsypalii
     1021 dpkmpregll hngvpipvpp mdvlklgeqr qteageklfl vlffdnkrtw qwlprdkvfp
     1081 lgvddtvdkl kmmegrktsi rksvqvaydr amihlsrvqg dnpfipatyl
//
LOCUS       XP_041323092             530 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 22B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323092
VERSION     XP_041323092.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467158.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..530
                     /product="TBC1 domain family member 22B isoform X1"
                     /calculated_mol_wt=61306
     Region          232..482
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..530
                     /gene="TBC1D22B"
                     /coded_by="XM_041467158.1:77..1669"
                     /db_xref="GeneID:121353372"
ORIGIN      
        1 maaesgrqfw krsaklpgrl nprwinsvrt sslegqplqc iqpvygaqhp pldsrltknf
       61 ikdrskatgl pmkskkassf hefarstsda wdigddeded fssssssssl qtlnskvaka
      121 aaaqvlenhs klrakpercq palgdlptnc kvikssseaq lsrtseeacv rsplqkqqsl
      181 plrpviplva risdqnasga ppmtvrektr lekfrqllss hntdldelrk cswpgvprev
      241 rpvtwrllsg ylpanserrk ltlqrkreey fgfiqqyyds rneehhqdty rqihidiprt
      301 npliplfqqp lvqeiferil fiwairhpas gyvqgindlv tpffvvflse hveedvenfd
      361 vtnlsqdvlr sieadsfwcm sklldgiqdn ytfaqpgiqk kvkaleelvs rideqvhnhf
      421 rkyeveylqf afrwmnnllm relplrctir lwdtyqsepe gfshfhlyvc aaflikwrke
      481 ildeedfqgl lmllqnlpti hwgneeigll laeayrlkym fadapnhyrr
//
LOCUS       XP_041323098             509 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 22B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323098
VERSION     XP_041323098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="TBC1 domain family member 22B isoform X2"
                     /calculated_mol_wt=58856
     Region          211..461
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..509
                     /gene="TBC1D22B"
                     /coded_by="XM_041467164.1:80..1609"
                     /db_xref="GeneID:121353372"
ORIGIN      
        1 maaesgrqfw krsaklpgsi qpvygaqhpp ldsrltknfi kdrskatglp mkskkassfh
       61 efarstsdaw digddededf sssssssslq tlnskvakaa aaqvlenhsk lrakpercqp
      121 algdlptnck vikssseaql srtseeacvr splqkqqslp lrpviplvar isdqnasgap
      181 pmtvrektrl ekfrqllssh ntdldelrkc swpgvprevr pvtwrllsgy lpanserrkl
      241 tlqrkreeyf gfiqqyydsr neehhqdtyr qihidiprtn pliplfqqpl vqeiferilf
      301 iwairhpasg yvqgindlvt pffvvflseh veedvenfdv tnlsqdvlrs ieadsfwcms
      361 klldgiqdny tfaqpgiqkk vkaleelvsr ideqvhnhfr kyeveylqfa frwmnnllmr
      421 elplrctirl wdtyqsepeg fshfhlyvca aflikwrkei ldeedfqgll mllqnlptih
      481 wgneeiglll aeayrlkymf adapnhyrr
//
LOCUS       XP_041323106             490 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 22B isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323106
VERSION     XP_041323106.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467172.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="TBC1 domain family member 22B isoform X3"
                     /calculated_mol_wt=56740
     Region          192..442
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..490
                     /gene="TBC1D22B"
                     /coded_by="XM_041467172.1:80..1552"
                     /db_xref="GeneID:121353372"
ORIGIN      
        1 maaesgrqfw krsaklpgsf ikdrskatgl pmkskkassf hefarstsda wdigddeded
       61 fssssssssl qtlnskvaka aaaqvlenhs klrakpercq palgdlptnc kvikssseaq
      121 lsrtseeacv rsplqkqqsl plrpviplva risdqnasga ppmtvrektr lekfrqllss
      181 hntdldelrk cswpgvprev rpvtwrllsg ylpanserrk ltlqrkreey fgfiqqyyds
      241 rneehhqdty rqihidiprt npliplfqqp lvqeiferil fiwairhpas gyvqgindlv
      301 tpffvvflse hveedvenfd vtnlsqdvlr sieadsfwcm sklldgiqdn ytfaqpgiqk
      361 kvkaleelvs rideqvhnhf rkyeveylqf afrwmnnllm relplrctir lwdtyqsepe
      421 gfshfhlyvc aaflikwrke ildeedfqgl lmllqnlpti hwgneeigll laeayrlkym
      481 fadapnhyrr
//
LOCUS       XP_041323128             401 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 13 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323128
VERSION     XP_041323128.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467194.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="mitogen-activated protein kinase 13 isoform X1"
                     /calculated_mol_wt=45966
     Region          77..387
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..401
                     /gene="MAPK13"
                     /coded_by="XM_041467194.1:2664..3869"
                     /db_xref="GeneID:121353388"
ORIGIN      
        1 mshlcfswcp tsspqehrlp katqgstelp kgpfsaallh aqepeallpl lepvglqnlf
       61 khstdirmvf lfaccssaid kktgekvaik klcrpfqsei fakrayrelm llkhmqhenv
      121 iglldvftst asyqgfqdfy lvmpymrtdl qkimghefsd ekiqylvyqm lkglkyihsa
      181 givhrdlkps nlavnedcql kildfglarq adaemtgyvv trwyrapevi lnwmhynqtv
      241 diwsigcima emltgktlfk gkdyldqltq ilkvtghpge dflekledka aksyikslpk
      301 ipkkdlsvlf pkanpqavdl ldkmlqldve krltateala hpyfdqfrdi eeeteaqhsy
      361 ddslehekls ieewkkhiyk eiltfspiar kdskkrsgms l
//
LOCUS       XP_041323137             365 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 13 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323137
VERSION     XP_041323137.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467203.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..365
                     /product="mitogen-activated protein kinase 13 isoform X2"
                     /calculated_mol_wt=42244
     Region          9..351
                     /region_name="STKc_p38delta"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     p38delta Mitogen-Activated Protein Kinase (also called
                     MAPK13); cd07879"
                     /db_xref="CDD:143384"
     Site            order(31..34,36,38..39,52,54,71,76,85,87,105,107..110,113,
                     115..116,150,152,154..155,157,167..168,170..171,180,
                     182..185,187,225)
                     /site_type="active"
                     /db_xref="CDD:143384"
     Site            order(31..32,36,38..39,52,54,76,85,87,105,107..110,113,
                     150,152,154..155,167..168,170)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143384"
     Site            order(71,115,150,152,171,180,182..185,187,225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143384"
     Site            order(112,117,125..126,129,158..162,311)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143384"
     Site            167..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143384"
     Site            order(191..192,195,197,199..201,236,242,246,249,259,
                     291..294)
                     /site_type="lipid-binding"
                     /note="lipid binding site [chemical binding]"
                     /db_xref="CDD:143384"
     CDS             1..365
                     /gene="MAPK13"
                     /coded_by="XM_041467203.1:1447..2544"
                     /db_xref="GeneID:121353388"
ORIGIN      
        1 mniarrrgfy rqevnntlwe lprrytslhp lgsgaygsvc saidkktgek vaikklcrpf
       61 qseifakray relmllkhmq henviglldv ftstasyqgf qdfylvmpym rtdlqkimgh
      121 efsdekiqyl vyqmlkglky ihsagivhrd lkpsnlavne dcqlkildfg larqadaemt
      181 gyvvtrwyra pevilnwmhy nqtvdiwsig cimaemltgk tlfkgkdyld qltqilkvtg
      241 hpgedflekl edkaaksyik slpkipkkdl svlfpkanpq avdlldkmlq ldvekrltat
      301 ealahpyfdq frdieeetea qhsyddsleh eklsieewkk hiykeiltfs piarkdskkr
      361 sgmsl
//
LOCUS       XP_041323147             360 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 14 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323147
VERSION     XP_041323147.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467213.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..360
                     /product="mitogen-activated protein kinase 14 isoform X1"
                     /calculated_mol_wt=41327
     Region          6..350
                     /region_name="STKc_p38alpha"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     p38alpha Mitogen-Activated Protein Kinase (also called
                     MAPK14); cd07877"
                     /db_xref="CDD:143382"
     Site            order(30..33,35,37..38,51,53,70,75,84,86,104,106..109,112,
                     114..115,150,152,154..155,157,167..168,170..171,180,
                     182..185,187,225)
                     /site_type="active"
                     /db_xref="CDD:143382"
     Site            order(30..31,35,37..38,51,53,75,84,86,104,106..109,112,
                     150,152,154..155,167..168,170)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143382"
     Site            order(70,114,150,152,171,180,182..185,187,225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143382"
     Site            order(111,116,119..120,125..126,129,158..162,311)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143382"
     Site            167..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143382"
     Site            order(191..192,195,197,199..201,236,242,246,249,259,
                     291..294)
                     /site_type="lipid-binding"
                     /note="lipid binding site [chemical binding]"
                     /db_xref="CDD:143382"
     CDS             1..360
                     /gene="MAPK14"
                     /coded_by="XM_041467213.1:600..1682"
                     /db_xref="GeneID:121353401"
ORIGIN      
        1 msqerpkfyr qelnktvwev peryqnlspv gsgaygsvcs afdtktglrv avkklsrpfq
       61 siihakrtyr elrllkhmkh enviglldvf tpaksleefn dvylvthlmg adlnnivkcq
      121 kltddhvqfl iyqilrglky ihsadiihrd lkpsnlavne dcelkildfg larhtddemt
      181 gyvatrwyra peimlnwmhy nqtvdiwsvg cimaelltgr tlfpgtdhid qlklilrlvg
      241 tpgpellkki ssesarnyiq slsympkmnf envfiganpl avdllekmlv ldtdkritaa
      301 ealahayfaq yhdpddepva dpydqsfesr eleieewksl tydevisfvp ppldqeemes
//
LOCUS       XP_041323156             360 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 14 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323156
VERSION     XP_041323156.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467222.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..360
                     /product="mitogen-activated protein kinase 14 isoform X2"
                     /calculated_mol_wt=41502
     Region          6..350
                     /region_name="STKc_p38alpha"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     p38alpha Mitogen-Activated Protein Kinase (also called
                     MAPK14); cd07877"
                     /db_xref="CDD:143382"
     Site            order(30..33,35,37..38,51,53,70,75,84,86,104,106..109,112,
                     114..115,150,152,154..155,157,167..168,170..171,180,
                     182..185,187,225)
                     /site_type="active"
                     /db_xref="CDD:143382"
     Site            order(30..31,35,37..38,51,53,75,84,86,104,106..109,112,
                     150,152,154..155,167..168,170)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143382"
     Site            order(70,114,150,152,171,180,182..185,187,225)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143382"
     Site            order(111,116,119..120,125..126,129,158..162,311)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143382"
     Site            167..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143382"
     Site            order(191..192,195,197,199..201,236,242,246,249,259,
                     291..294)
                     /site_type="lipid-binding"
                     /note="lipid binding site [chemical binding]"
                     /db_xref="CDD:143382"
     CDS             1..360
                     /gene="MAPK14"
                     /coded_by="XM_041467222.1:611..1693"
                     /db_xref="GeneID:121353401"
ORIGIN      
        1 msqerpkfyr qelnktvwev peryqnlspv gsgaygsvcs afdtktglrv avkklsrpfq
       61 siihakrtyr elrllkhmkh enviglldvf tpaksleefn dvylvthlmg adlnnivkcq
      121 kltddhvqfl iyqilrglky ihsadiihrd lkpsnlavne dcelkildfg larhtddemt
      181 gyvatrwyra peimlnwmhy nqtvdiwsvg cimaelltgr tlfpgtdhin qlqqimrltg
      241 tppaylinrm pshearnyiq slsympkmnf envfiganpl avdllekmlv ldtdkritaa
      301 ealahayfaq yhdpddepva dpydqsfesr eleieewksl tydevisfvp ppldqeemes
//
LOCUS       XP_041323180             658 aa            linear   VRT 06-MAY-2021
DEFINITION  SRSF protein kinase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323180
VERSION     XP_041323180.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467246.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..658
                     /product="SRSF protein kinase 1 isoform X1"
                     /calculated_mol_wt=74145
     Region          70..656
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(86..89,92,94,107,109,145,165..168,213,217..218,220,
                     320,378)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271120"
     Region          <496..>555
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..658
                     /gene="SRPK1"
                     /coded_by="XM_041467246.1:57..2033"
                     /db_xref="GeneID:121353417"
ORIGIN      
        1 merkvlalqa rkkrtkakkd kaqrkpdtqh rgpaaqsesd lpeqeeeilg sdddeqedpn
       61 dyckggyhlv kigdlfngry hvirklgwgh fstvwlawdi qgrrfvamkv vksaehytet
      121 aldeikllks vrnsdpndps kervvqlldd fkisgvngsh icmvfevlgh hllkwiiksn
      181 yqglplpcvk kiikqvlqgl dylhtkcrii htdikpenil lcvndqyirr laaeatewqr
      241 sgapppsgsa vstapqpkpa dkmsknkkkk lkkkqkrqae llekrmqeie emekeanpgq
      301 tqpeeveeaq tplemlikvs pseesiskkp aealgqegsn lmessvekgg teincngvip
      361 mtdltdsgne gsvrleddlh nandcgsdph tqknenlhsc nysqhnsdse srpqeavldl
      421 fvplvpedsm vcqptpnqeq afseqginnf qesirteips edenetnspt dnkgksaagn
      481 fllnplepkn adklkvkiad lgnacwvhkh ftediqtrqy rslevligsg yntpadiwst
      541 acmafelatg dylfephsge dysrdedhia liiellgkip rklilagkys kefftkkgdl
      601 khitklkpwg lfevlvekye waqdeaaaft dfllpmleli pekrataaec lrhpwlns
//
LOCUS       XP_041323189             657 aa            linear   VRT 06-MAY-2021
DEFINITION  SRSF protein kinase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323189
VERSION     XP_041323189.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467255.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..657
                     /product="SRSF protein kinase 1 isoform X2"
                     /calculated_mol_wt=73538
     Region          69..655
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(85..88,91,93,106,108,144,164..167,212,216..217,219,
                     319,377)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271120"
     Region          <495..>554
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..657
                     /gene="SRPK1"
                     /coded_by="XM_041467255.1:221..2194"
                     /db_xref="GeneID:121353417"
ORIGIN      
        1 mafsktigls sgisvsmggr ascrpdtqhr gpaaqsesdl peqeeeilgs dddeqedpnd
       61 yckggyhlvk igdlfngryh virklgwghf stvwlawdiq grrfvamkvv ksaehyteta
      121 ldeikllksv rnsdpndpsk ervvqllddf kisgvngshi cmvfevlghh llkwiiksny
      181 qglplpcvkk iikqvlqgld ylhtkcriih tdikpenill cvndqyirrl aaeatewqrs
      241 gapppsgsav stapqpkpad kmsknkkkkl kkkqkrqael lekrmqeiee mekeanpgqt
      301 qpeeveeaqt plemlikvsp seesiskkpa ealgqegsnl messvekggt eincngvipm
      361 tdltdsgneg svrleddlhn andcgsdpht qknenlhscn ysqhnsdses rpqeavldlf
      421 vplvpedsmv cqptpnqeqa fseqginnfq esirteipse denetnsptd nkgksaagnf
      481 llnplepkna dklkvkiadl gnacwvhkhf tediqtrqyr slevligsgy ntpadiwsta
      541 cmafelatgd ylfephsged ysrdedhial iiellgkipr klilagkysk efftkkgdlk
      601 hitklkpwgl fevlvekyew aqdeaaaftd fllpmlelip ekrataaecl rhpwlns
//
LOCUS       XP_041323200             657 aa            linear   VRT 06-MAY-2021
DEFINITION  SRSF protein kinase 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323200
VERSION     XP_041323200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..657
                     /product="SRSF protein kinase 1 isoform X3"
                     /calculated_mol_wt=74074
     Region          70..655
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(86..89,92,94,107,109,145,165..168,213,217..218,220,
                     320,377)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271120"
     Region          <495..>554
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..657
                     /gene="SRPK1"
                     /coded_by="XM_041467266.1:57..2030"
                     /db_xref="GeneID:121353417"
ORIGIN      
        1 merkvlalqa rkkrtkakkd kaqrkpdtqh rgpaaqsesd lpeqeeeilg sdddeqedpn
       61 dyckggyhlv kigdlfngry hvirklgwgh fstvwlawdi qgrrfvamkv vksaehytet
      121 aldeikllks vrnsdpndps kervvqlldd fkisgvngsh icmvfevlgh hllkwiiksn
      181 yqglplpcvk kiikqvlqgl dylhtkcrii htdikpenil lcvndqyirr laaeatewqr
      241 sgapppsgsa vstapqpkpa dkmsknkkkk lkkkqkrqae llekrmqeie emekeanpgq
      301 tqpeeveeaq tplemlikvs pseesiskkp ealgqegsnl messvekggt eincngvipm
      361 tdltdsgneg svrleddlhn andcgsdpht qknenlhscn ysqhnsdses rpqeavldlf
      421 vplvpedsmv cqptpnqeqa fseqginnfq esirteipse denetnsptd nkgksaagnf
      481 llnplepkna dklkvkiadl gnacwvhkhf tediqtrqyr slevligsgy ntpadiwsta
      541 cmafelatgd ylfephsged ysrdedhial iiellgkipr klilagkysk efftkkgdlk
      601 hitklkpwgl fevlvekyew aqdeaaaftd fllpmlelip ekrataaecl rhpwlns
//
LOCUS       XP_041323215             230 aa            linear   VRT 06-MAY-2021
DEFINITION  LHFPL tetraspan subfamily member 5 protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323215
VERSION     XP_041323215.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467281.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..230
                     /product="LHFPL tetraspan subfamily member 5 protein
                     isoform X1"
                     /calculated_mol_wt=25155
     Region          25..211
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..230
                     /gene="LHFPL5"
                     /coded_by="XM_041467281.1:119..811"
                     /db_xref="GeneID:121353425"
ORIGIN      
        1 mskllpaqea ariyhtnyvr naramgvlwa lftlcfsilm vvtfiqpywi gdsidtpqag
       61 yfglfsycig naltgelick gspldfgtip ssafktamff vgistfliig tilcfslfff
      121 cnaatvykvc awmqlaagaq cppvpaatgl migcliypdg wdssevrrmc gdktdkytlg
      181 actvrwayil ciigildali lsflafvlgn rqdnllpsdf kvenkeegnd
//
LOCUS       XP_041323222             221 aa            linear   VRT 06-MAY-2021
DEFINITION  LHFPL tetraspan subfamily member 5 protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323222
VERSION     XP_041323222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="LHFPL tetraspan subfamily member 5 protein
                     isoform X2"
                     /calculated_mol_wt=24334
     Region          25..202
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..221
                     /gene="LHFPL5"
                     /coded_by="XM_041467288.1:121..786"
                     /db_xref="GeneID:121353425"
ORIGIN      
        1 mskllpaqea ariyhtnyvr naramgvlwa lftlcfsilm vvtfiqpywi gdsidtpqag
       61 yfglfsycig naltgelick gspldfgtip ssafktamff vgistfliig tilcfslfff
      121 cnaatvykvc awmqlaaatg lmigcliypd gwdssevrrm cgdktdkytl gactvrwayi
      181 lciigildal ilsflafvlg nrqdnllpsd fkvenkeegn d
//
LOCUS       XP_041323228             208 aa            linear   VRT 06-MAY-2021
DEFINITION  LHFPL tetraspan subfamily member 5 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323228
VERSION     XP_041323228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="LHFPL tetraspan subfamily member 5 protein
                     isoform X3"
                     /calculated_mol_wt=22716
     Region          25..>137
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..208
                     /gene="LHFPL5"
                     /coded_by="XM_041467294.1:119..745"
                     /db_xref="GeneID:121353425"
ORIGIN      
        1 mskllpaqea ariyhtnyvr naramgvlwa lftlcfsilm vvtfiqpywi gdsidtpqag
       61 yfglfsycig naltgelick gspldfgtip ssafktamff vgistfliig tilcfslfff
      121 cnaatvykvc awmqlaaept afprreilsa nqgsclltll lacpqakrke nigkgqghcp
      181 rrgfwftehl vaerstaaps tsvlvpgk
//
LOCUS       XP_041323237             208 aa            linear   VRT 06-MAY-2021
DEFINITION  LHFPL tetraspan subfamily member 5 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323237
VERSION     XP_041323237.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467303.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="LHFPL tetraspan subfamily member 5 protein
                     isoform X3"
                     /calculated_mol_wt=22716
     Region          25..>137
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..208
                     /gene="LHFPL5"
                     /coded_by="XM_041467303.1:119..745"
                     /db_xref="GeneID:121353425"
ORIGIN      
        1 mskllpaqea ariyhtnyvr naramgvlwa lftlcfsilm vvtfiqpywi gdsidtpqag
       61 yfglfsycig naltgelick gspldfgtip ssafktamff vgistfliig tilcfslfff
      121 cnaatvykvc awmqlaaept afprreilsa nqgsclltll lacpqakrke nigkgqghcp
      181 rrgfwftehl vaerstaaps tsvlvpgk
//
LOCUS       XP_041323256             137 aa            linear   VRT 06-MAY-2021
DEFINITION  colipase [Pyrgilauda ruficollis].
ACCESSION   XP_041323256
VERSION     XP_041323256.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467322.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="colipase"
                     /calculated_mol_wt=14700
     Region          47..130
                     /region_name="CLPS"
                     /note="Colipase; cd23011"
                     /db_xref="CDD:437996"
     Site            order(47..48,55..57,77,79,85..87,105..108,130)
                     /site_type="other"
                     /note="lipase binding site [polypeptide binding]"
                     /db_xref="CDD:437996"
     CDS             1..137
                     /gene="CLPS"
                     /coded_by="XM_041467322.1:58..471"
                     /db_xref="GeneID:121353453"
ORIGIN      
        1 meivaikhll apwqshiept makvlpacll vallllapal paqqerglvl nldvgelclq
       61 saqcksgcch rvnglslarc apraaetqec spksiygvyy kcpcesgltc dadktivgsi
      121 tnkdfgvckd phearrr
//
LOCUS       XP_041323265             726 aa            linear   VRT 06-MAY-2021
DEFINITION  LEM domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323265
VERSION     XP_041323265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..726
                     /product="LEM domain-containing protein 2"
                     /calculated_mol_wt=79082
     Region          4..41
                     /region_name="LEM_LEMD2"
                     /note="LEM (Lap2/Emerin/Man1) domain found in LEM
                     domain-containing protein 2 (LEM2); cd12941"
                     /db_xref="CDD:240588"
     Site            order(6..7,19..24,26..27,30..31,33..34)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:240588"
     Region          40..>414
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <492..716
                     /region_name="MSC"
                     /note="Man1-Src1p-C-terminal domain; pfam09402"
                     /db_xref="CDD:430586"
     CDS             1..726
                     /gene="LEMD2"
                     /coded_by="XM_041467331.1:44..2224"
                     /db_xref="GeneID:121353465"
ORIGIN      
        1 maeltdaelr kellalgyrp gpitattrkv yikklgclra evaaarrsgr tappspgrss
       61 agppqaspsr qrsgftgeaa reseeedeee eeeeevgrpp asrwgtsges ggqawgdprg
      121 sppgraggir veggssrdsl grlspseqwg ttverggggl gaslaghggl sspsqwdtsi
      181 ersgglgadr agalssashw etsrdvaehg rglgqglgat ldgfrgsslq wgasersggl
      241 ssglrptldr frgsnstsqw spsaersggl gsragsgldg vgglsstpyw gssagskplp
      301 seeksrshwg tsgggvgaqs sraawdtagd rrglssnsww rretevtpst qwgssaapgr
      361 fsslfrrgke dlassvgkea erdagsrtgg lirrfpwraa sdgghgvtpr sallrsaprq
      421 qpegkgkgle yylsqflcla slvllliflg ilvvkmagsg wldgreesfn llpvdcdkrt
      481 ddfcqakhkd vimamlhely nylsvqagnf ecgnpenlks kciwvsevkd hvlnvtgsss
      541 qkfeaalhwi lnsnkdlgiw lkgrdlsepv ssveevfcle sahpqmglgc rfrravvtai
      601 mnlflffwsl itlwgillyl ryrwrkmeee eqamyemvkk iiavvqdhyk ewernleryp
      661 yvgifhvrds lippqsrkkm krvweravdf lasnesriqt eshrvagedm lvwrwtqpsy
      721 lsdseh
//
LOCUS       XP_041323279             104 aa            linear   VRT 06-MAY-2021
DEFINITION  G0/G1 switch protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323279
VERSION     XP_041323279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..104
                     /product="G0/G1 switch protein 2"
                     /calculated_mol_wt=11529
     Region          1..104
                     /region_name="G0-G1_switch_2"
                     /note="G0/G1 switch protein 2; pfam15103"
                     /db_xref="CDD:464504"
     CDS             1..104
                     /gene="G0S2"
                     /coded_by="XM_041467345.1:115..429"
                     /db_xref="GeneID:121353473"
ORIGIN      
        1 metvhelipf akemlsqkpn rkmvklymlg svlaffgvvi glvetvcspf sssgsleeee
       61 eegrkkpaap reqrlpqkre dlvpdkgkar palqralvtr qhas
//
LOCUS       XP_041323289            1457 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323289
VERSION     XP_041323289.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467355.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1457
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=158330
     Region          14..106
                     /region_name="PDZ0_MAGI-1_3-like"
                     /note="PDZ domain 0 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06730"
                     /db_xref="CDD:467212"
     Site            order(28..34,46,49,86,90,93..94)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467212"
     Region          125..>199
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..328
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(312,323)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          344..374
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          410..494
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(410,431..435,437,458,460,466,468..469,491,493..494)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(421..427,439,442,472,476,479..480)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          574..655
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(587..593,602,605,632,636,639..640)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          723..807
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(734..740,752,755,785,789,792..793)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          848..933
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(859..865,881,884,914,918,921..922)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1012..1094
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1023..1029,1041,1044,1074,1078,1081..1082)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1457
                     /gene="MAGI3"
                     /coded_by="XM_041467355.1:71..4444"
                     /db_xref="GeneID:121353480"
ORIGIN      
        1 msktlrkkrh wlskvqecvv swggpagpdp dllrggaerg efpylagrlp aggegapgpa
       61 llsgkapapg dvllevngtp vsglthrdtl avvrhfrepv rlktvrpgkv inkdlrhyls
      121 lqfqkgsidh klqqvirdnl ylrtipcttr aprdgevpgv dynfipveqf kaleesgall
      181 esgtydgnfy gtpkppaeps pfqpdpvdqv lfdndfdtes qrkrttsvsk mqrmesslpe
      241 eeeeeekeav ngsggienke khsdspdwmk pvpsynqtss nmdfrnylsr detleplpkn
      301 wemaytdtgm iyfidhntkt ttwldprlck kakapedced gelpygweki edpqygtyyv
      361 dhinqktqfe npvleakrkk qlgqtdagps ksgpgrsvft qdpsqltgal irtslkkstm
      421 gfgftiiggd rpdeflqvkn vlkdgpaaqd griapgdviv dingscvlgh thadvvqmfq
      481 lipinqyvnm tlcrgyplpd dnedpvvdim tatpvinglp vakgdasmss qdlvaatvvl
      541 dqngkvlvng rlngpsvdsa eqrvsfassg gsqpelvtip lvkgpkgfgf aiadsptgqk
      601 vkmildsqwc qglqkgdvik eichqnvqnl thlqvvevlk qfpvgaevpl lilrggppsp
      661 tkaakgkdkq dssgsleavs dtipqpmpfp psavrpgspk ldpsevylks ktiyedkpsn
      721 trdldvflrk qesgfgfrvl ggdgpdqpiy igaiiplgaa ekdgrlraad elmcidgvpv
      781 kgkshkqvld lmtsaarngq vlltvrrkif fsgekqaeee epqpvltqns sprlsrvdfa
      841 nqpcpevydv rlqrkenegf gfviltsknk pppgviphki grviegspad qcgklkvgdr
      901 isavnsqsiv elshdsivql ikeagnvvtl tvvaeeeqrg ppsgtnsarq spapqhrplg
      961 lapinpdrga aeseagkevs nsyqlswpeh khmaqldaas gvgsrhsqnp gcfpvelerg
     1021 prgfgfslrg gkeynmglfi lrlaedgpav kdgrihvgdq iveingeptq githtraiel
     1081 iqaggnkvml llrpgtglip dhsdwdsynp assnviyeeq spllsssshs aspsevcyla
     1141 vpgealtrvq lseeleqaen tvpdkistlt enlcerkpqs spqrtknrwe cpsspafgit
     1201 kgsseagtrr grsaspaktr aaegyphmgf hsprkgdpek nnlshksdss rseskttgkg
     1261 mknsdkqess hgsrgrsasp qrhlskpgst etvgriqtsc sveqlkggng kpevtrkerm
     1321 kqktpgkteg csadqhysvf ggnslpfrds krnaseddll tksssgdtgs srfktsslss
     1381 ipllsmekqr raetqealmm nrhhgerhme lpnetkdgts qpernspvrk tlitpgpwrv
     1441 psgckgspaa gvpgkgv
//
LOCUS       XP_041323299            1456 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323299
VERSION     XP_041323299.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467365.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1456
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 3 isoform X2"
                     /calculated_mol_wt=158202
     Region          14..106
                     /region_name="PDZ0_MAGI-1_3-like"
                     /note="PDZ domain 0 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06730"
                     /db_xref="CDD:467212"
     Site            order(28..34,46,49,86,90,93..94)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467212"
     Region          125..>199
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..328
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(312,323)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          344..374
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          410..494
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(410,431..435,437,458,460,466,468..469,491,493..494)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(421..427,439,442,472,476,479..480)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          574..655
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(587..593,602,605,632,636,639..640)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          722..806
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(733..739,751,754,784,788,791..792)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          847..932
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(858..864,880,883,913,917,920..921)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1011..1093
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1022..1028,1040,1043,1073,1077,1080..1081)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1456
                     /gene="MAGI3"
                     /coded_by="XM_041467365.1:71..4441"
                     /db_xref="GeneID:121353480"
ORIGIN      
        1 msktlrkkrh wlskvqecvv swggpagpdp dllrggaerg efpylagrlp aggegapgpa
       61 llsgkapapg dvllevngtp vsglthrdtl avvrhfrepv rlktvrpgkv inkdlrhyls
      121 lqfqkgsidh klqqvirdnl ylrtipcttr aprdgevpgv dynfipveqf kaleesgall
      181 esgtydgnfy gtpkppaeps pfqpdpvdqv lfdndfdtes qrkrttsvsk mqrmesslpe
      241 eeeeeekeav ngsggienke khsdspdwmk pvpsynqtss nmdfrnylsr detleplpkn
      301 wemaytdtgm iyfidhntkt ttwldprlck kakapedced gelpygweki edpqygtyyv
      361 dhinqktqfe npvleakrkk qlgqtdagps ksgpgrsvft qdpsqltgal irtslkkstm
      421 gfgftiiggd rpdeflqvkn vlkdgpaaqd griapgdviv dingscvlgh thadvvqmfq
      481 lipinqyvnm tlcrgyplpd dnedpvvdim tatpvinglp vakgdasmss qdlvaatvvl
      541 dqngkvlvng rlngpsvdsa eqrvsfassg gsqpelvtip lvkgpkgfgf aiadsptgqk
      601 vkmildsqwc qglqkgdvik eichqnvqnl thlqvvevlk qfpvgaevpl lilrggppsp
      661 tkaakgdkqd ssgsleavsd tipqpmpfpp savrpgspkl dpsevylksk tiyedkpsnt
      721 rdldvflrkq esgfgfrvlg gdgpdqpiyi gaiiplgaae kdgrlraade lmcidgvpvk
      781 gkshkqvldl mtsaarngqv lltvrrkiff sgekqaeeee pqpvltqnss prlsrvdfan
      841 qpcpevydvr lqrkenegfg fviltsknkp ppgviphkig rviegspadq cgklkvgdri
      901 savnsqsive lshdsivqli keagnvvtlt vvaeeeqrgp psgtnsarqs papqhrplgl
      961 apinpdrgaa eseagkevsn syqlswpehk hmaqldaasg vgsrhsqnpg cfpvelergp
     1021 rgfgfslrgg keynmglfil rlaedgpavk dgrihvgdqi veingeptqg ithtraieli
     1081 qaggnkvmll lrpgtglipd hsdwdsynpa ssnviyeeqs pllsssshsa spsevcylav
     1141 pgealtrvql seeleqaent vpdkistlte nlcerkpqss pqrtknrwec psspafgitk
     1201 gsseagtrrg rsaspaktra aegyphmgfh sprkgdpekn nlshksdssr seskttgkgm
     1261 knsdkqessh gsrgrsaspq rhlskpgste tvgriqtscs veqlkggngk pevtrkermk
     1321 qktpgktegc sadqhysvfg gnslpfrdsk rnaseddllt ksssgdtgss rfktsslssi
     1381 pllsmekqrr aetqealmmn rhhgerhmel pnetkdgtsq pernspvrkt litpgpwrvp
     1441 sgckgspaag vpgkgv
//
LOCUS       XP_041323308            1394 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323308
VERSION     XP_041323308.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467374.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1394
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 3 isoform X3"
                     /calculated_mol_wt=151688
     Region          14..106
                     /region_name="PDZ0_MAGI-1_3-like"
                     /note="PDZ domain 0 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06730"
                     /db_xref="CDD:467212"
     Site            order(28..34,46,49,86,90,93..94)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467212"
     Region          125..>199
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..328
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(312,323)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          344..374
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          <391..431
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Region          511..592
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(524..530,539,542,569,573,576..577)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          660..744
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(671..677,689,692,722,726,729..730)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          785..870
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(796..802,818,821,851,855,858..859)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          949..1031
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(960..966,978,981,1011,1015,1018..1019)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1394
                     /gene="MAGI3"
                     /coded_by="XM_041467374.1:71..4255"
                     /db_xref="GeneID:121353480"
ORIGIN      
        1 msktlrkkrh wlskvqecvv swggpagpdp dllrggaerg efpylagrlp aggegapgpa
       61 llsgkapapg dvllevngtp vsglthrdtl avvrhfrepv rlktvrpgkv inkdlrhyls
      121 lqfqkgsidh klqqvirdnl ylrtipcttr aprdgevpgv dynfipveqf kaleesgall
      181 esgtydgnfy gtpkppaeps pfqpdpvdqv lfdndfdtes qrkrttsvsk mqrmesslpe
      241 eeeeeekeav ngsggienke khsdspdwmk pvpsynqtss nmdfrnylsr detleplpkn
      301 wemaytdtgm iyfidhntkt ttwldprlck kakapedced gelpygweki edpqygtyyv
      361 dhinqktqfe npvleakrkk qlgqtdagps ksgdvivdin gscvlghtha dvvqmfqlip
      421 inqyvnmtlc rgyplpddne dpvvdimtat pvinglpvak gdasmssqdl vaatvvldqn
      481 gkvlvngrln gpsvdsaeqr vsfassggsq pelvtiplvk gpkgfgfaia dsptgqkvkm
      541 ildsqwcqgl qkgdvikeic hqnvqnlthl qvvevlkqfp vgaevpllil rggppsptka
      601 akgkdkqdss gsleavsdti pqpmpfppsa vrpgspkldp sevylkskti yedkpsntrd
      661 ldvflrkqes gfgfrvlggd gpdqpiyiga iiplgaaekd grlraadelm cidgvpvkgk
      721 shkqvldlmt saarngqvll tvrrkiffsg ekqaeeeepq pvltqnsspr lsrvdfanqp
      781 cpevydvrlq rkenegfgfv iltsknkppp gviphkigrv iegspadqcg klkvgdrisa
      841 vnsqsivels hdsivqlike agnvvtltvv aeeeqrgpps gtnsarqspa pqhrplglap
      901 inpdrgaaes eagkevsnsy qlswpehkhm aqldaasgvg srhsqnpgcf pvelergprg
      961 fgfslrggke ynmglfilrl aedgpavkdg rihvgdqive ingeptqgit htraieliqa
     1021 ggnkvmlllr pgtglipdhs dwdsynpass nviyeeqspl lsssshsasp sevcylavpg
     1081 ealtrvqlse eleqaentvp dkistltenl cerkpqsspq rtknrwecps spafgitkgs
     1141 seagtrrgrs aspaktraae gyphmgfhsp rkgdpeknnl shksdssrse skttgkgmkn
     1201 sdkqesshgs rgrsaspqrh lskpgstetv griqtscsve qlkggngkpe vtrkermkqk
     1261 tpgktegcsa dqhysvfggn slpfrdskrn aseddlltks ssgdtgssrf ktsslssipl
     1321 lsmekqrrae tqealmmnrh hgerhmelpn etkdgtsqpe rnspvrktli tpgpwrvpsg
     1381 ckgspaagvp gkgv
//
LOCUS       XP_041323317            1118 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-associated guanylate kinase, WW and PDZ domain-containing
            protein 3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323317
VERSION     XP_041323317.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467383.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1118
                     /product="membrane-associated guanylate kinase, WW and PDZ
                     domain-containing protein 3 isoform X4"
                     /calculated_mol_wt=121632
     Region          14..106
                     /region_name="PDZ0_MAGI-1_3-like"
                     /note="PDZ domain 0 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06730"
                     /db_xref="CDD:467212"
     Site            order(28..34,46,49,86,90,93..94)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467212"
     Region          125..>199
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     Region          296..328
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(312,323)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          343..374
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(358,369)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          410..494
                     /region_name="PDZ1_MAGI-1_3-like"
                     /note="PDZ domain 1 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06731"
                     /db_xref="CDD:467213"
     Site            order(410,431..435,437,458,460,466,468..469,491,493..494)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467213"
     Site            order(421..427,439,442,472,476,479..480)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467213"
     Region          574..655
                     /region_name="PDZ2_MAGI-1_3-like"
                     /note="PDZ domain 2 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06732"
                     /db_xref="CDD:467214"
     Site            order(587..593,602,605,632,636,639..640)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467214"
     Region          723..807
                     /region_name="PDZ3_MAGI-1_3-like"
                     /note="PDZ domain 3 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06733"
                     /db_xref="CDD:467215"
     Site            order(734..740,752,755,785,789,792..793)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467215"
     Region          848..933
                     /region_name="PDZ4_MAGI-1_3-like"
                     /note="PDZ domain 4 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06734"
                     /db_xref="CDD:467216"
     Site            order(859..865,881,884,914,918,921..922)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467216"
     Region          1012..1094
                     /region_name="PDZ5_MAGI-1_3-like"
                     /note="PDZ domain 5 of membrane-associated guanylate
                     kinase inverted 1 (MAGI-1), MAGI-2, and MAGI-3, and
                     related domains; cd06735"
                     /db_xref="CDD:467217"
     Site            order(1023..1029,1041,1044,1074,1078,1081..1082)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467217"
     CDS             1..1118
                     /gene="MAGI3"
                     /coded_by="XM_041467383.1:71..3427"
                     /db_xref="GeneID:121353480"
ORIGIN      
        1 msktlrkkrh wlskvqecvv swggpagpdp dllrggaerg efpylagrlp aggegapgpa
       61 llsgkapapg dvllevngtp vsglthrdtl avvrhfrepv rlktvrpgkv inkdlrhyls
      121 lqfqkgsidh klqqvirdnl ylrtipcttr aprdgevpgv dynfipveqf kaleesgall
      181 esgtydgnfy gtpkppaeps pfqpdpvdqv lfdndfdtes qrkrttsvsk mqrmesslpe
      241 eeeeeekeav ngsggienke khsdspdwmk pvpsynqtss nmdfrnylsr detleplpkn
      301 wemaytdtgm iyfidhntkt ttwldprlck kakapedced gelpygweki edpqygtyyv
      361 dhinqktqfe npvleakrkk qlgqtdagps ksgpgrsvft qdpsqltgal irtslkkstm
      421 gfgftiiggd rpdeflqvkn vlkdgpaaqd griapgdviv dingscvlgh thadvvqmfq
      481 lipinqyvnm tlcrgyplpd dnedpvvdim tatpvinglp vakgdasmss qdlvaatvvl
      541 dqngkvlvng rlngpsvdsa eqrvsfassg gsqpelvtip lvkgpkgfgf aiadsptgqk
      601 vkmildsqwc qglqkgdvik eichqnvqnl thlqvvevlk qfpvgaevpl lilrggppsp
      661 tkaakgkdkq dssgsleavs dtipqpmpfp psavrpgspk ldpsevylks ktiyedkpsn
      721 trdldvflrk qesgfgfrvl ggdgpdqpiy igaiiplgaa ekdgrlraad elmcidgvpv
      781 kgkshkqvld lmtsaarngq vlltvrrkif fsgekqaeee epqpvltqns sprlsrvdfa
      841 nqpcpevydv rlqrkenegf gfviltsknk pppgviphki grviegspad qcgklkvgdr
      901 isavnsqsiv elshdsivql ikeagnvvtl tvvaeeeqrg ppsgtnsarq spapqhrplg
      961 lapinpdrga aeseagkevs nsyqlswpeh khmaqldaas gvgsrhsqnp gcfpvelerg
     1021 prgfgfslrg gkeynmglfi lrlaedgpav kdgrihvgdq iveingeptq githtraiel
     1081 iqaggnkvml llrpgtglip dhslapsslc pyvkpeqh
//
LOCUS       XP_041323341             498 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type 1G [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323341
VERSION     XP_041323341.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467407.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="calcium/calmodulin-dependent protein kinase type
                     1G"
                     /calculated_mol_wt=54467
     Region          19..303
                     /region_name="STKc_CaMKI_gamma"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type I gamma;
                     cd14166"
                     /db_xref="CDD:271068"
     Site            order(29..33,37,50,52,81,97..100,104,106,142..143,145,
                     147..148,150,163..164,167,180..184,186)
                     /site_type="active"
                     /db_xref="CDD:271068"
     Site            order(29..32,37,50,52,81,97..100,104,147..148,150,
                     163..164)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271068"
     Site            order(33,104,106,142..143,145,147,167,180..184,186)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271068"
     Site            163..184
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271068"
     CDS             1..498
                     /gene="CAMK1G"
                     /coded_by="XM_041467407.1:1..1497"
                     /db_xref="GeneID:121353509"
ORIGIN      
        1 mgrkeedgsg swkkqtsnir ktfifmealg sgafsevflv kqkstgklfa lkcikkspln
       61 rdssleneia vlkkikheni vtlediyest thfylvmqlv sggelfdril ergvytekda
      121 slvihqvlta vkylhengiv hrdlkpenll yltpeenski mitdfglskm eqngimstac
      181 gtpgyvapev laqkpyskav dcwsigvity illcgyppfy eetesklfek ikegyfefes
      241 pfwddisesa kdfirhllek npsarftcee alrhpwingn talhrdiyps vsaqiqknfa
      301 kskwrqafna aavvhhmkkl hmsghgaaeg svpatetsep prpssptgtp ppaapsddkd
      361 taqgpsqghp npprppqpqq dpglgeeklp sspeegplpg dsslalpdtp sppeegplpg
      421 dsslalpdtp sppgrsscgc spscvghekm kasscsetvl lkkssrshhf ksevlvpmkt
      481 skhsshcgtg qtgvclim
//
LOCUS       XP_041323353             460 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon regulatory factor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323353
VERSION     XP_041323353.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467419.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..460
                     /product="interferon regulatory factor 6"
                     /calculated_mol_wt=52545
     Region          9..114
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(42,82,84..85,88)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(87..88,90,93)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          217..401
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..460
                     /gene="IRF6"
                     /coded_by="XM_041467419.1:10..1392"
                     /db_xref="GeneID:121353516"
ORIGIN      
        1 malhprrvrl kpwlvaqvds gmypgliwln reakrfqipw khatrhspqh eeentifkaw
       61 avetgkyqeg vdepdpakwk aqlrcalnks refnlmydgt kevpmnpiki yevcdipqsq
      121 gsiinpgstg sapwdekdnd lddeeeeeln qsqhvpiqet fpflnindsp mapasaencs
      181 setvwpknep ldmempptal qhdffsspel wisslpmtdl eikfeyrgke tgptttvsnp
      241 qgcrlfygel gpmpdqeelf gpisleqvkf pgteqitner qkiftsrlld vmdrglilev
      301 sghaiyavrl cqckvywsgp capssttpnl ierqkkvklf cletflseli ahqkgqiekq
      361 ppyeiyfcfg eewpdgkpre rklivvqvip vvarmiyemf sgdftrsfds gsvrlqistp
      421 dikdnivahl kqlyrllqnh qegwpmqapa mhmaqplpaq
//
LOCUS       XP_041323364             815 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein phosphatase non-receptor type 22 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323364
VERSION     XP_041323364.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467430.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="tyrosine-protein phosphatase non-receptor type
                     22"
                     /calculated_mol_wt=89598
     Region          92..325
                     /region_name="PTPc-N22"
                     /note="catalytic domain of tyrosine-protein phosphatase
                     non-receptor type 22; cd14602"
                     /db_xref="CDD:350450"
     Region          <374..601
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <500..790
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..815
                     /gene="PTPN22"
                     /coded_by="XM_041467430.1:189..2636"
                     /db_xref="GeneID:121353527"
ORIGIN      
        1 mksenhrqls paapsaadhl tcpvpggpgq apsstmdqrg illqnleraq gkklnrgefa
       61 eeflklkrqs tkyrsdkiyp taaseqpenv kknrykdilp fdhsrvelsl itsdtdshyi
      121 nanfikgvyg prayiatqgp lpttvtdfwr miweyevlvv vmacmefemg kkkcerywae
      181 vdgsplhcgp fsitceaeek rneyvirtlk vtlneaarti fhfhyknwpd hhvpssiepi
      241 lelvrdircf qpddrvpvci hcsagcgrtg vicaidytqk llkdgivpvn fsvfslvqem
      301 rtqrpcivqt keqyelvyda vielfkrqiq aldaqkdsaa sqegaghpaa kpvltpvedi
      361 yglssltcse reeqaphqpl ppqqdwhqhl pavapskasl pslcapgaqp ssargvppir
      421 qaisfgalnf sscrkaaage pwaagdapqk rcsweleldt kgagrrapga raplawtast
      481 plvlgqqgqg wewdagdakp vwspqwpkdg hssfqdgfsp vdmnpsrraa dappghrkqg
      541 qcphpslcsa edpyfsslsp ddpvspvfpf lggqdellps csasappqpt tasspsshha
      601 pldqerifss aplpgpdedd ddddappplp qrtpesfiva sepgqfpqat sdfqipdrnp
      661 nigtswewsg eshseefhdp vrlrpcksvk lwsprtetaq dhsnsppplp ertpesfvla
      721 eaaslqpaar nssspvglen kgsgttpkel ikcfrrsksl kilknvrksi cnpssltkss
      781 epaptnsprs flnfgfanrf skpkgprnpp pswni
//
LOCUS       XP_041323373             968 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptide, CUB and EGF-like domain-containing protein 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323373
VERSION     XP_041323373.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467439.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..968
                     /product="signal peptide, CUB and EGF-like
                     domain-containing protein 3"
                     /calculated_mol_wt=106900
     Region          10..45
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          53..87
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          93..128
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          138..174
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          178..213
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          217..252
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          258..293
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          <290..326
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          338..373
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          617..664
                     /region_name="Ephrin_rec_like"
                     /note="Tyrosine-protein kinase ephrin type A/B
                     receptor-like; pfam07699"
                     /db_xref="CDD:429604"
     Region          671..718
                     /region_name="Ephrin_rec_like"
                     /note="Tyrosine-protein kinase ephrin type A/B
                     receptor-like; pfam07699"
                     /db_xref="CDD:429604"
     Region          727..774
                     /region_name="Ephrin_rec_like"
                     /note="Tyrosine-protein kinase ephrin type A/B
                     receptor-like; pfam07699"
                     /db_xref="CDD:429604"
     Region          779..890
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(787,789,791,818,823,861,885,887,889..890)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     CDS             1..968
                     /gene="SCUBE3"
                     /coded_by="XM_041467439.1:1..2907"
                     /db_xref="GeneID:121353536"
ORIGIN      
        1 mhvvrdvdec vegtdnchid aicqntpksy kcicksgytg dgkhckdvde cerednagcv
       61 hecvnipgny rctcydgfrl ahdghncldl decsegnggc qqtcvnmmgs yecfcregff
      121 lsdnqhtciq rpeegmncmn knhgcahicr etpkggiace crpgfeltkn qrdckltcny
      181 gnggcqhtcd dtdqgpkcgc hvkfllhsdg vtcietcavn nggcdskchd aatgvhcscp
      241 mgfmlqpdrk tckdidecrl nnggcdhicr ntvgsfecsc kkgyklline rncqdidecs
      301 fdrtcdhlci ntpgsfqclc hkgytlyglt hcgdidecsi nrggckfgci ntpgsyqctc
      361 pagcklhwnk kdcvagacpl elvkclpgsv ppratltcnk mgkkdscals ctskarflpe
      421 sdssytvscg tpvlrqgsqh rptnssqqcl etvaapvkqk asfkikdakc hlhprtkgkq
      481 eeagkagaqg gsapcsdcqv tfvnlkcdss kkgkgrrarn spskevtrit lefeaeikpe
      541 eitascnlhc lrqrvekklk saikalkksi nqerfllrfs gmeyevarkl svaperqesc
      601 gpgqqrlask cvscsqgtyy hgqteqcvpc ppgtyqekeg qlscdlcprg dtfgpigatn
      661 itgctgqcpp gqhsadgfkp cqpcprgsyq pevgralcfp cggglttrhe galsfqdcdt
      721 kvqcspghyy ntsvhrcirc avgtyqpdfr qnyciscpgn tttdfdgsts vsqcknrqcg
      781 gelgeytgyi espnypgnyp aniectwnin pppkrkiliv vpeiflpsed ecgdvlvmrk
      841 nsspssitty etcqtyerpi aftarsrklw infktseans argfqipyvt ydedyeqlve
      901 divrdgrlya senhqeilkd kklikaffdv lahpqnyfky tekhkemlpr sfikllrskv
      961 ssflrpyk
//
LOCUS       XP_041323384             193 aa            linear   VRT 06-MAY-2021
DEFINITION  U1 small nuclear ribonucleoprotein C isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323384
VERSION     XP_041323384.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467450.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..193
                     /product="U1 small nuclear ribonucleoprotein C isoform X1"
                     /calculated_mol_wt=20504
     Region          37..71
                     /region_name="zf-U1"
                     /note="U1 zinc finger; pfam06220"
                     /db_xref="CDD:368798"
     CDS             1..193
                     /gene="SNRPC"
                     /coded_by="XM_041467450.1:274..855"
                     /db_xref="GeneID:121353547"
ORIGIN      
        1 mappagrger hreahplslp rptaagggqa adggavfycd ycdtylthds psvrkthcsg
       61 rkhkenvkdy yqkwmeeqaq slidktiaaa fqqgkipptp fsapppagam ippppsipgp
      121 prpgmmpaph mggppmmpmm gppppgmmpv gpapgmrppm gghmpmmpgp pmmrppsrpm
      181 mvptrpgmtr pdr
//
LOCUS       XP_041323393             192 aa            linear   VRT 06-MAY-2021
DEFINITION  U1 small nuclear ribonucleoprotein C isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323393
VERSION     XP_041323393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="U1 small nuclear ribonucleoprotein C isoform X2"
                     /calculated_mol_wt=20421
     Region          37..71
                     /region_name="zf-U1"
                     /note="U1 zinc finger; pfam06220"
                     /db_xref="CDD:368798"
     CDS             1..192
                     /gene="SNRPC"
                     /coded_by="XM_041467459.1:275..853"
                     /db_xref="GeneID:121353547"
ORIGIN      
        1 mappagrger hreahplslp rptaagggqa adggavfycd ycdtylthds psvrkthcsg
       61 rkhkenvkdy yqkwmeeqaq slidkttaaf qqgkipptpf sapppagami ppppsipgpp
      121 rpgmmpaphm ggppmmpmmg ppppgmmpvg papgmrppmg ghmpmmpgpp mmrppsrpmm
      181 vptrpgmtrp dr
//
LOCUS       XP_041323403             160 aa            linear   VRT 06-MAY-2021
DEFINITION  U1 small nuclear ribonucleoprotein C isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323403
VERSION     XP_041323403.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467469.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..160
                     /product="U1 small nuclear ribonucleoprotein C isoform X3"
                     /calculated_mol_wt=17362
     Region          1..38
                     /region_name="zf-U1"
                     /note="U1 zinc finger; pfam06220"
                     /db_xref="CDD:368798"
     CDS             1..160
                     /gene="SNRPC"
                     /coded_by="XM_041467469.1:110..592"
                     /db_xref="GeneID:121353547"
ORIGIN      
        1 mpkfycdycd tylthdspsv rkthcsgrkh kenvkdyyqk wmeeqaqsli dktiaaafqq
       61 gkipptpfsa pppagamipp ppsipgpprp gmmpaphmgg ppmmpmmgpp ppgmmpvgpa
      121 pgmrppmggh mpmmpgppmm rppsrpmmvp trpgmtrpdr
//
LOCUS       XP_041323410             159 aa            linear   VRT 06-MAY-2021
DEFINITION  U1 small nuclear ribonucleoprotein C isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323410
VERSION     XP_041323410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..159
                     /product="U1 small nuclear ribonucleoprotein C isoform X4"
                     /calculated_mol_wt=17279
     Region          1..38
                     /region_name="zf-U1"
                     /note="U1 zinc finger; pfam06220"
                     /db_xref="CDD:368798"
     CDS             1..159
                     /gene="SNRPC"
                     /coded_by="XM_041467476.1:110..589"
                     /db_xref="GeneID:121353547"
ORIGIN      
        1 mpkfycdycd tylthdspsv rkthcsgrkh kenvkdyyqk wmeeqaqsli dkttaafqqg
       61 kipptpfsap ppagamippp psipgpprpg mmpaphmggp pmmpmmgppp pgmmpvgpap
      121 gmrppmgghm pmmpgppmmr ppsrpmmvpt rpgmtrpdr
//
LOCUS       XP_041323422             134 aa            linear   VRT 06-MAY-2021
DEFINITION  chemokine-like protein TAFA-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323422
VERSION     XP_041323422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..134
                     /product="chemokine-like protein TAFA-3"
                     /calculated_mol_wt=14771
     Region          45..132
                     /region_name="TAFA"
                     /note="TAFA family; pfam12020"
                     /db_xref="CDD:432266"
     CDS             1..134
                     /gene="TAFA3"
                     /coded_by="XM_041467488.1:209..613"
                     /db_xref="GeneID:121353567"
ORIGIN      
        1 mserdlqsls kwvfvlslcl ttlwgrltla sthhhrshsv hvepgtcevi aahrccnrnk
       61 ieersqtvkc scfpgqvagt traapscvda sivlqkwwcq mepcldgeec kvlpdlsgws
      121 cssgnkvktt kvtr
//
LOCUS       XP_041323431             134 aa            linear   VRT 06-MAY-2021
DEFINITION  chemokine-like protein TAFA-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323431
VERSION     XP_041323431.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467497.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..134
                     /product="chemokine-like protein TAFA-3"
                     /calculated_mol_wt=14771
     Region          45..132
                     /region_name="TAFA"
                     /note="TAFA family; pfam12020"
                     /db_xref="CDD:432266"
     CDS             1..134
                     /gene="TAFA3"
                     /coded_by="XM_041467497.1:206..610"
                     /db_xref="GeneID:121353567"
ORIGIN      
        1 mserdlqsls kwvfvlslcl ttlwgrltla sthhhrshsv hvepgtcevi aahrccnrnk
       61 ieersqtvkc scfpgqvagt traapscvda sivlqkwwcq mepcldgeec kvlpdlsgws
      121 cssgnkvktt kvtr
//
LOCUS       XP_041323442             197 aa            linear   VRT 06-MAY-2021
DEFINITION  promotilin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323442
VERSION     XP_041323442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..197
                     /product="promotilin-like isoform X1"
                     /calculated_mol_wt=21952
     CDS             1..197
                     /gene="LOC121353582"
                     /coded_by="XM_041467508.1:235..828"
                     /db_xref="GeneID:121353582"
ORIGIN      
        1 mllknksvyt nsfekrivsq gtsqsrhfys qlrsnwksky psgglglswv aagaepkafl
       61 vtppspflpw cllscavqal rmvsrkvvas lllvsllsvl aeqtqgfmpf ftqsdfqkmq
      121 lqekernkag qkkslsslqq leeegfseqs gvdvnaaktl qqalpvrawl tprqlekyqd
      181 vlekllaell qdtpdad
//
LOCUS       XP_041323449             116 aa            linear   VRT 06-MAY-2021
DEFINITION  promotilin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323449
VERSION     XP_041323449.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467515.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..116
                     /product="promotilin-like isoform X2"
                     /calculated_mol_wt=12951
     CDS             1..116
                     /gene="LOC121353582"
                     /coded_by="XM_041467515.1:371..721"
                     /db_xref="GeneID:121353582"
ORIGIN      
        1 mvsrkvvasl llvsllsvla eqtqgfmpff tqsdfqkmql qekernkagq kkslsslqql
       61 eeegfseqsg vdvnaaktlq qalpvrawlt prqlekyqdv lekllaellq dtpdad
//
LOCUS       XP_041323460             116 aa            linear   VRT 06-MAY-2021
DEFINITION  promotilin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323460
VERSION     XP_041323460.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467526.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..116
                     /product="promotilin-like isoform X2"
                     /calculated_mol_wt=12951
     CDS             1..116
                     /gene="LOC121353582"
                     /coded_by="XM_041467526.1:66..416"
                     /db_xref="GeneID:121353582"
ORIGIN      
        1 mvsrkvvasl llvsllsvla eqtqgfmpff tqsdfqkmql qekernkagq kkslsslqql
       61 eeegfseqsg vdvnaaktlq qalpvrawlt prqlekyqdv lekllaellq dtpdad
//
LOCUS       XP_041323474             653 aa            linear   VRT 06-MAY-2021
DEFINITION  CTTNBP2 N-terminal-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041323474
VERSION     XP_041323474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..653
                     /product="CTTNBP2 N-terminal-like protein"
                     /calculated_mol_wt=70556
     Region          23..206
                     /region_name="CortBP2"
                     /note="Cortactin-binding protein-2; pfam09727"
                     /db_xref="CDD:462860"
     Region          <118..>301
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <304..631
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     CDS             1..653
                     /gene="CTTNBP2NL"
                     /coded_by="XM_041467540.1:5..1966"
                     /db_xref="GeneID:121353597"
ORIGIN      
        1 mskemptklg fiifqvfrmn leklskpell tlfsilegel eardlvieal kaqhrdtfie
       61 erygkynisd plmalqrdfe tlkegnhgek qpvcsnplsi lkvvmkhckn mqermlsqla
      121 aaesrhrkvi ldleeerqrh aqdtaegddv tymlekerer ltqqvefeks qvkkfekeqk
      181 klssqleeer arhkqlssml vveckkatak aaeegqktae lslklekeks kvskleeela
      241 akrkrglqme aqvekqlsef diereqlkak lnreenrtka lkeeveclkk alkeleascq
      301 ehspskpvpa spsvtsrgvt tdsppvksvs cqteglqaer anpassskap htvfaspsap
      361 vhsyaksngh cdtdlqvage tnaaesqapr eksaaasega vengsspvrt espvhavpqp
      421 psagaslsps staassltps pcsspvlakr lggasasspg yqssyqvgin qrfhaarhkf
      481 qsqaeqeqqp gglqsppsrd lsptladnsa akqlarntvt qvlsrftsqq gpikpvspns
      541 spfgtdyrnl asavgprtea ghcpspvkvs splsplspgi ksptipraer gnpppippkk
      601 pglaqspaaa aplskascqa sslgapldva tscsnssvvs ngkdleillp sss
//
LOCUS       XP_041323487             293 aa            linear   VRT 06-MAY-2021
DEFINITION  corticosteroid 11-beta-dehydrogenase isozyme 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323487
VERSION     XP_041323487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..293
                     /product="corticosteroid 11-beta-dehydrogenase isozyme
                     1-like"
                     /calculated_mol_wt=31868
     Region          32..280
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(41,43..44,46,65..67,119..121,168..170,183,187,
                     215..218)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(143,170,183,187)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..293
                     /gene="LOC121353601"
                     /coded_by="XM_041467553.1:1..882"
                     /db_xref="GeneID:121353601"
ORIGIN      
        1 mglllkilip llgaalafyf ysapenfsee mlrgkrvivt gassgigeqm ayhlarmeah
       61 llltartear lqkvvercle lgaasaryis gsmdspslpq ellreaentw ggldmlilnh
      121 igqsgftyfs gdvghvrrlm etnfisyval ataglpmlke sqgsivvvss iagkiagpft
      181 apysatkfal dgffsslrqe liidkvnvsi tlcilgyint esavqavshv ipdtpapkee
      241 caleiiraga lrrrelhypa rtvgsmllvh slapelldsl vrssyrlenv rrt
//
LOCUS       XP_041323497             298 aa            linear   VRT 06-MAY-2021
DEFINITION  corticosteroid 11-beta-dehydrogenase isozyme 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323497
VERSION     XP_041323497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="corticosteroid 11-beta-dehydrogenase isozyme
                     1-like"
                     /calculated_mol_wt=32897
     Region          32..280
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(41,43..44,46,65..67,119..120,122,168..170,183,187,
                     215..218)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(143,170,183,187)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..298
                     /gene="LOC121353609"
                     /coded_by="XM_041467563.1:1..897"
                     /db_xref="GeneID:121353609"
ORIGIN      
        1 mgrlqkilip flglvlafwf ysardtfnpe mlrgkrvivt gastgigeqm ayhlarmgsh
       61 vlltartepr lqsvvrrcle lgaasarfvs gtmedtafaq hvvreaqssl ggldmlilnh
      121 vgasyfgffd gdvehvrkll einflsyvam ttsalpmlke sqgsivvvss magkvgfpft
      181 vpysatkfal dgffsslrqe faiqsinvsi tlcilgfidt dravraaaev lqerpaprde
      241 caleilkgaa lrrrelyyry sstrlplllr dcaaelldyl vrsryrlpap paaprppl
//
LOCUS       XP_041323510             556 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group E protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323510
VERSION     XP_041323510.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467576.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="Fanconi anemia group E protein isoform X1"
                     /calculated_mol_wt=60125
     Region          304..552
                     /region_name="FANCE_c-term"
                     /note="Fanconi anemia complementation group E protein,
                     C-terminal domain; cd07439"
                     /db_xref="CDD:143633"
     Site            order(378,387,393,523)
                     /site_type="active"
                     /note="disease-associated mutation sites [active]"
                     /db_xref="CDD:143633"
     Site            order(469,506..508,512,543..544)
                     /site_type="other"
                     /note="predicted protein-protein interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:143633"
     CDS             1..556
                     /gene="FANCE"
                     /coded_by="XM_041467576.1:245..1915"
                     /db_xref="GeneID:121353617"
ORIGIN      
        1 mvpclpsgtr vrlgpvcgss lwssaapaaa meprcppwqq lcprpcrlll halssgpaga
       61 vaalralqrg qpqqgpgqpf pwqaltaalc aqepslegtk dtlavkprll llpvlcqrnl
      121 fslllvvqda vprdclhqll qaleqdshvd pwvqtlgdll qqrpraeegs prptalsavc
      181 qqqlrglcqk iaqkkpegqr rlnwcfskqp gapdsvpqgg krkkvseesl esdseregkr
      241 lllqevafep lgpqecgdva eveeevpeep sgdtsaqstd kaaqdspqqd gelrkisqte
      301 latevqsfvq vhgqglkvll lqesnhselh vppklsilns ctpsqleglc sflqlstcpe
      361 pllmrfcswl lalspdlshs saailaeqlf lrrvlslsqp psrhlmaalt afcskyshpl
      421 crvlvaaalq epgegaeqtk lmcelveecl ephsvqllls hvlevplsek llpvlqavlg
      481 rqevlpaell dllvltlcqq apafstslnf aklvtavltv yqsqvspahr sslaavldrs
      541 tavlkkslqa vlggar
//
LOCUS       XP_041323518             556 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group E protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323518
VERSION     XP_041323518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="Fanconi anemia group E protein isoform X2"
                     /calculated_mol_wt=60125
     Region          304..552
                     /region_name="FANCE_c-term"
                     /note="Fanconi anemia complementation group E protein,
                     C-terminal domain; cd07439"
                     /db_xref="CDD:143633"
     Site            order(378,387,393,523)
                     /site_type="active"
                     /note="disease-associated mutation sites [active]"
                     /db_xref="CDD:143633"
     Site            order(469,506..508,512,543..544)
                     /site_type="other"
                     /note="predicted protein-protein interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:143633"
     CDS             1..556
                     /gene="FANCE"
                     /coded_by="XM_041467584.1:245..1915"
                     /db_xref="GeneID:121353617"
ORIGIN      
        1 mvpclpsgtr vrlgpvcgss lwssaapaaa meprcppwqq lcprpcrlll halssgpaga
       61 vaalralqrg qpqqgpgqpf pwqaltaalc aqepslegtk dtlavkprll llpvlcqrnl
      121 fslllvvqda vprdclhqll qaleqdshvd pwvqtlgdll qqrpraeegs prptalsavc
      181 qqqlrglcqk iaqkkpegqr rlnwcfskqp gapdsvpqgg krkkvseesl esdseregkr
      241 lllqevafep lgpqecgdva eveeevpeep sgdtsaqstd kaaqdspqqd gelrkisqte
      301 latevqsfvq vhgqglkvll lqesnhselh vppklsilns ctpsqleglc sflqlstcpe
      361 pllmrfcswl lalspdlshs saailaeqlf lrrvlslsqp psrhlmaalt afcskyshpl
      421 crvlvaaalq epgegaeqtk lmcelveecl ephsvqllls hvlevplsek llpvlqavlg
      481 rqevlpaell dllvltlcqq apafstslnf aklvtavltv yqsqvspahr sslaavldrs
      541 tavlkkslqa vlggar
//
LOCUS       XP_041323526             526 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group E protein isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323526
VERSION     XP_041323526.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467592.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..526
                     /product="Fanconi anemia group E protein isoform X3"
                     /calculated_mol_wt=57200
     Region          274..522
                     /region_name="FANCE_c-term"
                     /note="Fanconi anemia complementation group E protein,
                     C-terminal domain; cd07439"
                     /db_xref="CDD:143633"
     Site            order(348,357,363,493)
                     /site_type="active"
                     /note="disease-associated mutation sites [active]"
                     /db_xref="CDD:143633"
     Site            order(439,476..478,482,513..514)
                     /site_type="other"
                     /note="predicted protein-protein interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:143633"
     CDS             1..526
                     /gene="FANCE"
                     /coded_by="XM_041467592.1:80..1660"
                     /db_xref="GeneID:121353617"
ORIGIN      
        1 meprcppwqq lcprpcrlll halssgpaga vaalralqrg qpqqgpgqpf pwqaltaalc
       61 aqepslegtk dtlavkprll llpvlcqrnl fslllvvqda vprdclhqll qaleqdshvd
      121 pwvqtlgdll qqrpraeegs prptalsavc qqqlrglcqk iaqkkpegqr rlnwcfskqp
      181 gapdsvpqgg krkkvseesl esdseregkr lllqevafep lgpqecgdva eveeevpeep
      241 sgdtsaqstd kaaqdspqqd gelrkisqte latevqsfvq vhgqglkvll lqesnhselh
      301 vppklsilns ctpsqleglc sflqlstcpe pllmrfcswl lalspdlshs saailaeqlf
      361 lrrvlslsqp psrhlmaalt afcskyshpl crvlvaaalq epgegaeqtk lmcelveecl
      421 ephsvqllls hvlevplsek llpvlqavlg rqevlpaell dllvltlcqq apafstslnf
      481 aklvtavltv yqsqvspahr sslaavldrs tavlkkslqa vlggar
//
LOCUS       XP_041323535             508 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group E protein isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323535
VERSION     XP_041323535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="Fanconi anemia group E protein isoform X4"
                     /calculated_mol_wt=54764
     Region          <329..504
                     /region_name="FANCE_c-term"
                     /note="Fanconi anemia complementation group E protein,
                     C-terminal domain; cl12008"
                     /db_xref="CDD:299861"
     Site            order(421,458..460,464,495..496)
                     /site_type="other"
                     /note="predicted protein-protein interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:143633"
     CDS             1..508
                     /gene="FANCE"
                     /coded_by="XM_041467601.1:245..1771"
                     /db_xref="GeneID:121353617"
ORIGIN      
        1 mvpclpsgtr vrlgpvcgss lwssaapaaa meprcppwqq lcprpcrlll halssgpaga
       61 vaalralqrg qpqqgpgqpf pwqaltaalc aqepslegtk dtlavkprll llpvlcqrnl
      121 fslllvvqda vprdclhqll qaleqdshvd pwvqtlgdll qqrpraeegs prptalsavc
      181 qqqlrglcqk iaqkkpegqr rlnwcfskqp gapdsvpqgg krkkvseesl esdseregkr
      241 lllqevafep lgpqecgdva eveeevpeep sgdtsaqstd kaaqdspqqd gelrkisqte
      301 latevqsfvq vhgqglkvll lqesnhselh vppklsilns ctpsqvlsls qppsrhlmaa
      361 ltafcskysh plcrvlvaaa lqepgegaeq tklmcelvee clephsvqll lshvlevpls
      421 ekllpvlqav lgrqevlpae lldllvltlc qqapafstsl nfaklvtavl tvyqsqvspa
      481 hrsslaavld rstavlkksl qavlggar
//
LOCUS       XP_041323556            1112 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C6orf132 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041323556
VERSION     XP_041323556.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467622.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1112
                     /product="uncharacterized protein C6orf132 homolog"
                     /calculated_mol_wt=115271
     Region          <285..>355
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          556..>963
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1112
                     /gene="CUNH6orf132"
                     /coded_by="XM_041467622.1:1..3339"
                     /db_xref="GeneID:121353638"
ORIGIN      
        1 mkkhqphsvq gtfsrlfgkr hsspsaaslf atnppwiftq evtsdsaggt gdvievyygd
       61 nrfgtvtdsg tatlkprprv rplltflpln aqeshgvavp tpsvpedfve kaalgpgsql
      121 ngnyrmyssv gdlrpqaldg daldeeippp psvppppppa pvspppaspv ppppemlppp
      181 pplppeivpp ppppemvppp lppemvpppp amaappppas alsspstpap pdfippappg
      241 ardpapfgms kwksetvlnt rqadaegplc aaeagapaap spkeslqpkp ephltfprsf
      301 kvpppapars ssipvqegqr gqepvprqph arpplppcft irpagrarpg egeqrssglr
      361 qgggkpavpp plspkpgpgl sqganpagrr splpgsegek ipqlkaagrd sppkseplta
      421 ndldlpppdy ptceddwkda nnlnklrdel sallrsprre erplekpgap qpvdgtpsra
      481 gshepglsep qlarkdtgls kggesgkkea pssppstsgg spstavtapd snpdtqprsv
      541 mtirneleav lslkkegkpa pglssqkqgv engistpqvr ksppelrksp pdtrdsvvpk
      601 pvpsplpapa aavkdetdhe dhpapatgkv tedvspapgs lnssvnppvp pqgpaeeppa
      661 psppsaavsp aqspapqpss aifqykvhga gassteppca pgsaeppcpg ssgrsppdps
      721 gagqeevlih pvtgerverg spmalllaar qraqrgrqag dgaaalrarp alrlssassd
      781 ttstsffrhe skpysftvvp rpsaaspaas gwskppsfss sseqgrdara ageaqppgpr
      841 raaassllrg lldsgqpsqp gparhgapre eengdtaldf giippppefs neaddgplps
      901 reesrkcpsv pegsrgsgep ryfrwagysr syggkqepaa plplekswrn gdftpqypdy
      961 sgstsfpshg pnprplikkr lymsepdssy praaaapras gtlsstlssy gpggfgstag
     1021 egsrrpgpgh rngpssaqgr rastdaagka aayggtaaea kykgqngdfs pagvltasrp
     1081 ahgtshyggp sntftvrpgt rqpisyayqs hr
//
LOCUS       XP_041323565            1215 aa            linear   VRT 06-MAY-2021
DEFINITION  homeodomain-interacting protein kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323565
VERSION     XP_041323565.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467631.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1215
                     /product="homeodomain-interacting protein kinase 1 isoform
                     X1"
                     /calculated_mol_wt=131486
     Region          174..528
                     /region_name="STKc_HIPK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Homeodomain-Interacting Protein Kinase 1; cd14228"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,233,252,268..271,274,276..277,
                     315,317,319..320,322,337,340,350,352..355,357,394)
                     /site_type="active"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,252,268..271,274,315,317,
                     319..320,322,337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271130"
     Site            order(233,276,315,317,340,350,352..355,357,394)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271130"
     Site            336..357
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271130"
     CDS             1..1215
                     /gene="HIPK1"
                     /coded_by="XM_041467631.1:153..3800"
                     /db_xref="GeneID:121353640"
ORIGIN      
        1 masqlqvfsp psvsssafcs akklkvepsv wdvsgqsssd kyythsknlp aaqgqasssh
       61 qvanfsipay dqnlllpaps vehivvtaad stgssatasf qssqtlthrs nvsllepyqk
      121 cglkrkseev dsngsvqiie ehpplmlqnr pavgaaattt tvttksssss gegdyqlvqh
      181 eilcsmtnsy evleflgrgt fgqvakcwkr stkeivaiki lknhpsyarq gqievsilsr
      241 lssenadeyn fvrsyecfqh knhtclvfem leqnlydflk qnkfsplplk yirpilqqva
      301 talmklkslg lihadlkpen imlvdparqp yrvkvidfgs ashvskavcs tylqsryyra
      361 peiilglpfc eaidmwslgc viaelflgwp lypgaseydq iryisqtqgl paeyllsagt
      421 ktsrffnrdp nlgyplwrlk tpeeheletg ikskearkyi fnclddmaqv nmstdlegtd
      481 mlaekadrre yidllkkmlt idadkrvtpl ktlnhsfvtm ahlldfphsn hvkscfqnme
      541 ickrrvnmyd tvnqikspft thvapntstn ltmsfnnqln tvhnqasvla snstaaatls
      601 lansdvslln yqsalypssa apvagvaqqs vslqpgttqi ctqtdpfqqt fivcppafqt
      661 glqattkhsg fpvrmenavp ivpqapaaqp lqiqsgvltq gsctplmvat lhpqvatitp
      721 qyavpftlnc aagrpalveq taavlqawpg gtqqillpst wqqlpgvalh nsvqpaavip
      781 etigssqqla dwrnahshgn qystlmqqps lltnhvtlat aqplnvgvah vvrqqqssnv
      841 pakknkqpap stakpsssle pvptqvysli gssplrsass ssnvlvpvqe qhqpivipdt
      901 psppvsviti rsdtdeeeds kykpaslgmk qrsnvisyvt vndspdsdss lsspyapdpl
      961 sslrstggal elpsraaads sssrtiivpp lkmqlndciv atqasgilss ssssskskpv
     1021 asvsgqtsgc citpsgyrsh rvvtngvqpl nlsqnqqttv lasqerngna vprrqqayva
     1081 pltstisqap ytfqhsspvh phlaaatasa hlpsqphmyt yapstaatlg sttsiahlfs
     1141 pqgssrhtty aahpstlvhq vpvsvgpsll tsanvppaqy qhqfapqsyi gasrgsaiyt
     1201 gyplsptkin qysyl
//
LOCUS       XP_041323576            1214 aa            linear   VRT 06-MAY-2021
DEFINITION  homeodomain-interacting protein kinase 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323576
VERSION     XP_041323576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1214
                     /product="homeodomain-interacting protein kinase 1 isoform
                     X2"
                     /calculated_mol_wt=131358
     Region          174..528
                     /region_name="STKc_HIPK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Homeodomain-Interacting Protein Kinase 1; cd14228"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,233,252,268..271,274,276..277,
                     315,317,319..320,322,337,340,350,352..355,357,394)
                     /site_type="active"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,252,268..271,274,315,317,
                     319..320,322,337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271130"
     Site            order(233,276,315,317,340,350,352..355,357,394)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271130"
     Site            336..357
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271130"
     CDS             1..1214
                     /gene="HIPK1"
                     /coded_by="XM_041467642.1:154..3798"
                     /db_xref="GeneID:121353640"
ORIGIN      
        1 masqlqvfsp psvsssafcs akklkvepsv wdvsgqsssd kyythsknlp aaqgqasssh
       61 qvanfsipay dqnlllpaps vehivvtaad stgssatasf qssqtlthrs nvsllepyqk
      121 cglkrkseev dsngsvqiie ehpplmlqnr pavgaaattt tvttksssss gegdyqlvqh
      181 eilcsmtnsy evleflgrgt fgqvakcwkr stkeivaiki lknhpsyarq gqievsilsr
      241 lssenadeyn fvrsyecfqh knhtclvfem leqnlydflk qnkfsplplk yirpilqqva
      301 talmklkslg lihadlkpen imlvdparqp yrvkvidfgs ashvskavcs tylqsryyra
      361 peiilglpfc eaidmwslgc viaelflgwp lypgaseydq iryisqtqgl paeyllsagt
      421 ktsrffnrdp nlgyplwrlk tpeeheletg ikskearkyi fnclddmaqv nmstdlegtd
      481 mlaekadrre yidllkkmlt idadkrvtpl ktlnhsfvtm ahlldfphsn hvkscfqnme
      541 ickrrvnmyd tvnqikspft thvapntstn ltmsfnnqln tvhnqasvla snstaaatls
      601 lansdvslln yqsalypssa apvagvaqqs vslqpgttqi ctqtdpfqqt fivcppafqt
      661 glqattkhsg fpvrmenavp ivpqapaaqp lqiqsgvltq gsctplmvat lhpqvatitp
      721 qyavpftlnc aagrpalveq taavlawpgg tqqillpstw qqlpgvalhn svqpaavipe
      781 tigssqqlad wrnahshgnq ystlmqqpsl ltnhvtlata qplnvgvahv vrqqqssnvp
      841 akknkqpaps takpssslep vptqvyslig ssplrsasss snvlvpvqeq hqpivipdtp
      901 sppvsvitir sdtdeeedsk ykpaslgmkq rsnvisyvtv ndspdsdssl sspyapdpls
      961 slrstggale lpsraaadss ssrtiivppl kmqlndciva tqasgilsss sssskskpva
     1021 svsgqtsgcc itpsgyrshr vvtngvqpln lsqnqqttvl asqerngnav prrqqayvap
     1081 ltstisqapy tfqhsspvhp hlaaatasah lpsqphmyty apstaatlgs ttsiahlfsp
     1141 qgssrhttya ahpstlvhqv pvsvgpsllt sanvppaqyq hqfapqsyig asrgsaiytg
     1201 yplsptkinq ysyl
//
LOCUS       XP_041323582            1170 aa            linear   VRT 06-MAY-2021
DEFINITION  homeodomain-interacting protein kinase 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323582
VERSION     XP_041323582.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467648.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1170
                     /product="homeodomain-interacting protein kinase 1 isoform
                     X3"
                     /calculated_mol_wt=126881
     Region          174..528
                     /region_name="STKc_HIPK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Homeodomain-Interacting Protein Kinase 1; cd14228"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,233,252,268..271,274,276..277,
                     315,317,319..320,322,337,340,350,352..355,357,394)
                     /site_type="active"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,252,268..271,274,315,317,
                     319..320,322,337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271130"
     Site            order(233,276,315,317,340,350,352..355,357,394)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271130"
     Site            336..357
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271130"
     CDS             1..1170
                     /gene="HIPK1"
                     /coded_by="XM_041467648.1:153..3665"
                     /db_xref="GeneID:121353640"
ORIGIN      
        1 masqlqvfsp psvsssafcs akklkvepsv wdvsgqsssd kyythsknlp aaqgqasssh
       61 qvanfsipay dqnlllpaps vehivvtaad stgssatasf qssqtlthrs nvsllepyqk
      121 cglkrkseev dsngsvqiie ehpplmlqnr pavgaaattt tvttksssss gegdyqlvqh
      181 eilcsmtnsy evleflgrgt fgqvakcwkr stkeivaiki lknhpsyarq gqievsilsr
      241 lssenadeyn fvrsyecfqh knhtclvfem leqnlydflk qnkfsplplk yirpilqqva
      301 talmklkslg lihadlkpen imlvdparqp yrvkvidfgs ashvskavcs tylqsryyra
      361 peiilglpfc eaidmwslgc viaelflgwp lypgaseydq iryisqtqgl paeyllsagt
      421 ktsrffnrdp nlgyplwrlk tpeeheletg ikskearkyi fnclddmaqv nmstdlegtd
      481 mlaekadrre yidllkkmlt idadkrvtpl ktlnhsfvtm ahlldfphsn hvkscfqnme
      541 ickrrvnmyd tvnqikspft thvapntstn ltmsfnnqln tvhnqasvla snstaaatls
      601 lansdvslln yqsalypssa apvagvaqqs vslqpgttqi ctqtdpfqqt fivcppafqt
      661 glqattkhsg fpvrmenavp ivpqapaaqp lqiqsgvltq qawpggtqqi llpstwqqlp
      721 gvalhnsvqp aavipetigs sqqladwrna hshgnqystl mqqpslltnh vtlataqpln
      781 vgvahvvrqq qssnvpakkn kqpapstakp ssslepvptq vysligsspl rsassssnvl
      841 vpvqeqhqpi vipdtpsppv svitirsdtd eeedskykpa slgmkqrsnv isyvtvndsp
      901 dsdsslsspy apdplsslrs tggalelpsr aaadssssrt iivpplkmql ndcivatqas
      961 gilsssssss kskpvasvsg qtsgccitps gyrshrvvtn gvqplnlsqn qqttvlasqe
     1021 rngnavprrq qayvapltst isqapytfqh sspvhphlaa atasahlpsq phmytyapst
     1081 aatlgsttsi ahlfspqgss rhttyaahps tlvhqvpvsv gpslltsanv ppaqyqhqfa
     1141 pqsyigasrg saiytgypls ptkinqysyl
//
LOCUS       XP_041323589            1127 aa            linear   VRT 06-MAY-2021
DEFINITION  homeodomain-interacting protein kinase 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323589
VERSION     XP_041323589.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467655.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1127
                     /product="homeodomain-interacting protein kinase 1 isoform
                     X4"
                     /calculated_mol_wt=122137
     Region          174..528
                     /region_name="STKc_HIPK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Homeodomain-Interacting Protein Kinase 1; cd14228"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,233,252,268..271,274,276..277,
                     315,317,319..320,322,337,340,350,352..355,357,394)
                     /site_type="active"
                     /db_xref="CDD:271130"
     Site            order(196..200,204,217,219,252,268..271,274,315,317,
                     319..320,322,337)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271130"
     Site            order(233,276,315,317,340,350,352..355,357,394)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271130"
     Site            336..357
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271130"
     CDS             1..1127
                     /gene="HIPK1"
                     /coded_by="XM_041467655.1:156..3539"
                     /db_xref="GeneID:121353640"
ORIGIN      
        1 masqlqvfsp psvsssafcs akklkvepsv wdvsgqsssd kyythsknlp aaqgqasssh
       61 qvanfsipay dqnlllpaps vehivvtaad stgssatasf qssqtlthrs nvsllepyqk
      121 cglkrkseev dsngsvqiie ehpplmlqnr pavgaaattt tvttksssss gegdyqlvqh
      181 eilcsmtnsy evleflgrgt fgqvakcwkr stkeivaiki lknhpsyarq gqievsilsr
      241 lssenadeyn fvrsyecfqh knhtclvfem leqnlydflk qnkfsplplk yirpilqqva
      301 talmklkslg lihadlkpen imlvdparqp yrvkvidfgs ashvskavcs tylqsryyra
      361 peiilglpfc eaidmwslgc viaelflgwp lypgaseydq iryisqtqgl paeyllsagt
      421 ktsrffnrdp nlgyplwrlk tpeeheletg ikskearkyi fnclddmaqv nmstdlegtd
      481 mlaekadrre yidllkkmlt idadkrvtpl ktlnhsfvtm ahlldfphsn hvkscfqnme
      541 ickrrvnmyd tvnqikspft thvapntstn ltmsfnnqln tvhnqasvla snstaaatls
      601 lansdvslln yqsalypssa apvagvaqqs vslqpgttqi ctqtdpfqqt fivcppafqt
      661 glqattkhsg fpvrmenavp ivpqapaaqp lqiqsgvltq gsctplmvat lhpqvatitp
      721 qyavpftlnc aagrpalveq taavlqawpg gtqqillpst wqqlpgvalh nsvqpaavip
      781 etigssqqla dwrnahshgn qystlmqqps lltnhvtlat aqplnvgvah vvrqqqssnv
      841 pakknkqpap stakpsssle pvptqvysli gssplrsass ssnvlvpvqe qhqpivipdt
      901 psppvsviti rsdtdeeeds kykpaslgmk qrsnvisyvt vndspdsdss lsspyapdpl
      961 sslrstggal elpsraaads sssrtiivpp lkmqlndciv atqasgilss ssssskskpv
     1021 asvsgqtsgc citpsgyrsh rvvtngvqpl nlsqgssrht tyaahpstlv hqvpvsvgps
     1081 lltsanvppa qyqhqfapqs yigasrgsai ytgyplsptk inqysyl
//
LOCUS       XP_041323603             756 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-4 complex subunit beta-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323603
VERSION     XP_041323603.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467669.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..756
                     /product="AP-4 complex subunit beta-1"
                     /calculated_mol_wt=83351
     Region          10..525
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          121..149
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          159..193
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          202..225
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          638..748
                     /region_name="B2-adapt-app_C"
                     /note="Beta2-adaptin appendage, C-terminal sub-domain;
                     pfam09066"
                     /db_xref="CDD:462667"
     CDS             1..756
                     /gene="AP4B1"
                     /coded_by="XM_041467669.1:107..2377"
                     /db_xref="GeneID:121353656"
ORIGIN      
        1 mpylggeeaq relrralsnp hvqadparyr gavlrvirlm aqgadvsglf pemvkagavp
       61 dvvqkklvsf yvraqaprqp qlallavnsl rkdcahpspa vrglalrtmc glrmpgiqey
      121 lqqplvsglr dkasyvrraa vlgcakmvkl qgdcevdgal vnelysllrd qdpivvvncl
      181 raleeilkke ggvvinkpia hhllnrmpdl dqwgqsevlt fllrykprse delfdilnll
      241 dgylksssps vvvaatklfl vlareypdvq advlvrvkgp llsactsesr elcftalchv
      301 rqilrslpgh fsshykkffc sysephyikc qkmevlcelv ndenvqqvle elqgyctdvs
      361 aelaqgaifa ianiartyte qcvgiltell glqqehitsa vvrafrdlaw lcpqctdavc
      421 qalpgcedti qdsegkqali wllgthgeki pnapyvledf venvrseslp avkmelltal
      481 lrlflarpae cqdtlgrllh ycieeeqdma vrdrglfyyr llqsgveevk rvlcspksdp
      541 slgllgeqsk qpvnawalef ntlatvygre rwalataqqp vepscscspg adsrsrdtes
      601 lvsegdkevl evhpdtpvse gdkellqahp dagslslipd vsltaeqfek twlsldtscq
      661 lsvpwcgpvh adtiqtalrv vhihtiamsk agaqpwkayl saqddsgclf ltelllqaad
      721 selqvsvkqn eakpealqsf isalrtvlea vagles
//
LOCUS       XP_041323617             451 aa            linear   VRT 06-MAY-2021
DEFINITION  5' exonuclease Apollo [Pyrgilauda ruficollis].
ACCESSION   XP_041323617
VERSION     XP_041323617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467683.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..451
                     /product="5' exonuclease Apollo"
                     /calculated_mol_wt=50710
     Region          6..143
                     /region_name="SNM1A-1C-like_MBL-fold"
                     /note="SNM1A, artemis/SNM1C, yeast Pso2p, and related
                     proteins; MBL-fold metallo-hydrolase domain; cd16273"
                     /db_xref="CDD:293831"
     Site            order(31,33,35..36,92..93,113,137)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293831"
     Region          207..296
                     /region_name="DRMBL"
                     /note="DNA repair metallo-beta-lactamase; pfam07522"
                     /db_xref="CDD:429512"
     Region          415..445
                     /region_name="apollo_TRF2_binding"
                     /note="TRF2-binding region of apollo and similar proteins;
                     cd11662"
                     /db_xref="CDD:212560"
     Site            order(415,417..427)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212560"
     CDS             1..451
                     /gene="DCLRE1B"
                     /coded_by="XM_041467683.1:5..1360"
                     /db_xref="GeneID:121353658"
ORIGIN      
        1 msgtvlagtp iavdfwslrk aagarlffls hmhsdhtvgl sstwsrplyc spltarllhh
       61 rlqvpkcwir plevgqshvv gevtvtlids nhcpgsvmfl fegafgtily tgdfrytsam
      121 qgepalrgrh idrlyldnth chperalpsr alatrqaarl irahpqhhvv igvytlgket
      181 llvdlalefs twvvvspwrl eqmrllelpd vftteegtgw iravdvaeir wdalvawnaq
      241 hptiaiiptg rpvkvthpni hlvpysdhss feelrefvkw lkpcsiipiv kdnmcqvyfq
      301 eylssapqvl pdfrvsktvq esgqqqrrrr gqkptslwkr algssvprgv vydspekntg
      361 kpevftdvkv pqhycepalc skegrtchrg dkeelsgehl gaagaalvfs ehlatglaeq
      421 ylltplhvlk qfssqkfdql vedflrkkdm p
//
LOCUS       XP_041323629             198 aa            linear   VRT 06-MAY-2021
DEFINITION  guanylyl cyclase-activating protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323629
VERSION     XP_041323629.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467695.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="guanylyl cyclase-activating protein 2"
                     /calculated_mol_wt=23000
     Region          33..170
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..198
                     /gene="GUCA1B"
                     /coded_by="XM_041467695.1:188..784"
                     /db_xref="GeneID:121353663"
ORIGIN      
        1 mgqqftnaeg eqgeidvael qewykkfvve cpsgtlfmhe fkrffgvqdn qeaaeyvenm
       61 frafdkngdn tidfleyvaa lnlvlrgkle hklrwtfkvy dkdgngcidk pelleivesi
      121 yrlkkvcwse vedrtplltp eevvdrifql vdengdgqls ldefidgark dkwvmkmlqm
      181 dvnpggwiie qrrksalf
//
LOCUS       XP_041323640             199 aa            linear   VRT 06-MAY-2021
DEFINITION  guanylyl cyclase-activating protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323640
VERSION     XP_041323640.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467706.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..199
                     /product="guanylyl cyclase-activating protein 1"
                     /calculated_mol_wt=22782
     Region          30..160
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..199
                     /gene="LOC121353669"
                     /coded_by="XM_041467706.1:1..600"
                     /db_xref="GeneID:121353669"
ORIGIN      
        1 mgnmdgkave elsttechqw ykkfmtecps gqltlyefkq ffglknlspa ankyveqmfe
       61 tfdfnkdgyi dfmeyvaals lvlkgkvdqk lrwyfklydv dgngcidrae llniikairs
      121 inrcnekmta eeftdmvfnk idingdgels leefmegvqk demlldiltr sldlthivrl
      181 iqndgknphe agqdaqaaq
//
LOCUS       XP_041323660             756 aa            linear   VRT 06-MAY-2021
DEFINITION  protein PHTF1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323660
VERSION     XP_041323660.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467726.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..756
                     /product="protein PHTF1 isoform X1"
                     /calculated_mol_wt=85475
     Region          1..147
                     /region_name="PHTF1-2_N"
                     /note="Homeodomain containing protein PHTF1/2, N-terminal;
                     pfam12129"
                     /db_xref="CDD:463466"
     CDS             1..756
                     /gene="PHTF1"
                     /coded_by="XM_041467726.1:92..2362"
                     /db_xref="GeneID:121353682"
ORIGIN      
        1 macrdaiswy qkkigaydqq iwekaveqtq mkgfknkpkk kghiqpdlid vdlisgstfa
       61 kakpeipwts ltrkgivrvv ffplfshwwi qvtsqrifmw llvlylmqvv avvlyflvpa
      121 vsasevmgpl clmlllgtvh cqivstqvnr aagsnglsrr rrklrkavgv dgsswcspdr
      181 tskeeqsgsa slltnlssll fqrrnrgvkl vaekgtetes gvsavgdgik prqarsehrl
      241 lhckekskls dgekshqddg ttrdgasdel sseedaedae daealaqril lrpsmegass
      301 dnsyeerkkr pllslnqavs qvkqalkaar dsdsvvesel estlyrqdpr sclsvgprsr
      361 sgsrrdsest rqdsetedml wddllhgpec rssgtsdsee rsrrdsrrdl kedvfqqnhl
      421 fwlqntspas akvsaliweg ndckkvdmsv leisgiimsr vnahqqgvgy qmlgniitig
      481 laflpflyrl frtdsleqlc sislmellhi fcgapistsv lilsainfle rlcltwmfff
      541 mmcvaertyk qrflfaklfs hitsarkark yeiphfrlkk venikiwlsl rsylkrrgpq
      601 rsvdvvvssv fllalsiafi ccaqvlkghk tflsaaynwe flmweaalll fllrlaslgs
      661 etnkkysnis illteqinly lkmekkpnkk eqlslvnnvl klstkllkel dspfrlyglt
      721 mnpliynitr vvilsavsgv isdllgfnir lwkikp
//
LOCUS       XP_041323670             697 aa            linear   VRT 06-MAY-2021
DEFINITION  protein PHTF1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323670
VERSION     XP_041323670.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467736.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..697
                     /product="protein PHTF1 isoform X2"
                     /calculated_mol_wt=78635
     Region          1..147
                     /region_name="PHTF1-2_N"
                     /note="Homeodomain containing protein PHTF1/2, N-terminal;
                     pfam12129"
                     /db_xref="CDD:463466"
     CDS             1..697
                     /gene="PHTF1"
                     /coded_by="XM_041467736.1:92..2185"
                     /db_xref="GeneID:121353682"
ORIGIN      
        1 macrdaiswy qkkigaydqq iwekaveqtq mkgfknkpkk kghiqpdlid vdlisgstfa
       61 kakpeipwts ltrkgivrvv ffplfshwwi qvtsqrifmw llvlylmqvv avvlyflvpa
      121 vsasevmgpl clmlllgtvh cqivstqvnr aagsnglsrr rrklrkavgv dgsswcspdr
      181 tskeeqsgsa slltnlssll fqrrnrgvkl vaekgtetes gvsavgdgik prqarsehrl
      241 lhckekskls dgekshqddg ttrdgasdel sseedaedae daealaqril lrpsmegass
      301 dnsyeerkkr pllslnqavs qvkqalkaar dsdsvvesel estlyrqdpr sclsvgprsr
      361 sgsrrdsest rqdsetedml wddllhgpec rssgtsdsee rsrrdsrrdl kedvfqqnhl
      421 fwlqntspas akvsaliweg ndckkvdmsv leisgiimsr vnahqqgvgy qmlgniitig
      481 laflpflyrl frtdsleqlc sislmellhi fcgapistsv lilsainfle rlcltwmfff
      541 mmcvaertyk qrflfaklfs hitsarkark yeiphfrlkk venikiwlsl rsylkrrgpq
      601 rsvdvvvssv fllalsiafi ccaqvlkghk tflsaaynwe flmweaalll fllrlaslgs
      661 etnkkysnis illteqvgis wglvleyqpl acdvchr
//
LOCUS       XP_041323684             312 aa            linear   VRT 06-MAY-2021
DEFINITION  probable E3 ubiquitin-protein ligase makorin-1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323684
VERSION     XP_041323684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="probable E3 ubiquitin-protein ligase makorin-1"
                     /calculated_mol_wt=34768
     Region          133..192
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(135,138,159,161,164,167,185,188)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          <224..244
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..312
                     /gene="LOC121353690"
                     /coded_by="XM_041467750.1:44..982"
                     /db_xref="GeneID:121353690"
ORIGIN      
        1 mphchwgqep gteptamdrd qggaqcttac sktcvafkfp kveveveekd kknipalgnv
       61 prgaisgefv ptkargasgf qprgpaldpg ssdpkkavle matqtdpakv laepgaeaal
      121 ltsaalrars eavvcgicmd rvyekplpee rlfgilpncs haycvgcirk wrrsrafqsa
      181 vikacpecri pssyyiphky wisdvaekeq lirafkartg kirckfflrg hcpfrseciy
      241 lhelpaswlr rhrqrqlrmp tvfipssses sdeedeelct lewaltvaml etefphssyg
      301 hqmflidfsd sd
//
LOCUS       XP_041323696             246 aa            linear   VRT 06-MAY-2021
DEFINITION  hornerin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323696
VERSION     XP_041323696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="hornerin-like"
                     /calculated_mol_wt=24960
     Region          <68..>230
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..246
                     /gene="LOC121353696"
                     /coded_by="XM_041467762.1:151..891"
                     /db_xref="GeneID:121353696"
ORIGIN      
        1 mgsgqraasa gsvgghrqpr slpapltpag reqavgrqga drewgagsgq cqravsegtg
       61 spagreqags rqgmgsgqra vpagsvgghr qprgqgagre qtgngeraag sasgqcrrap
      121 aapragsrqg adrewgagsg qcqravsegs vgghrqprsl papltpahgq waralhlpsp
      181 arpmaarprr calpgqwepa lalvndaavq grlshvswpp asmetpreqa gveasgrhss
      241 tcpqcf
//
LOCUS       XP_041323716             207 aa            linear   VRT 06-MAY-2021
DEFINITION  cuticle collagen 40-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323716
VERSION     XP_041323716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="cuticle collagen 40-like"
                     /calculated_mol_wt=21033
     CDS             1..207
                     /gene="LOC121353705"
                     /coded_by="XM_041467782.1:121..744"
                     /db_xref="GeneID:121353705"
ORIGIN      
        1 mqcagcaqdv rkkktggarg caqdvrgmca gmqrgergda arcergcggd aagrargrgg
       61 assemqrevr gmcagmqrdv rgmcagmrrd argmspeiqr dvravcagie rdvrgmcagc
      121 aravpgpdpp aprpryspga asparggsrg aaeswggagp aeaeeppgpf wiprrgggrg
      181 akvtprrlqf pgggetpgkg pggagqe
//
LOCUS       XP_041323743             355 aa            linear   VRT 06-MAY-2021
DEFINITION  hematopoietic progenitor cell antigen CD34 [Pyrgilauda ruficollis].
ACCESSION   XP_041323743
VERSION     XP_041323743.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467809.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="hematopoietic progenitor cell antigen CD34"
                     /calculated_mol_wt=36872
     Region          <16..146
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          166..355
                     /region_name="CD34_antigen"
                     /note="CD34/Podocalyxin family; pfam06365"
                     /db_xref="CDD:461884"
     CDS             1..355
                     /gene="CD34"
                     /coded_by="XM_041467809.1:286..1353"
                     /db_xref="GeneID:121353716"
ORIGIN      
        1 mecrqllcil cllelagfaa gsttatpspa gtardsgrgt astataataa tgdsssaqpt
       61 saaatagsaa tsptppellg qlrsspppsa aptallgssp gvptsrspps qpgdsaltsg
      121 ppssaatpeh pavpaattal hsspqpalra ischgardqg dtgaiclqln esstcehfle
      181 rkgldlwqal cenrthsvel pceikltpss ldrdclllil kgekdpdkll ntlqkshwek
      241 fgieslkkes trsrrdpsqr tlialvtsgl llaflglagy flmrrrswsp agqrlaedpy
      301 ytengsqgnt mlmspsqepa epqekpnlng gtqengtgsk ngrsgrqhsp adtem
//
LOCUS       XP_041323763             347 aa            linear   VRT 06-MAY-2021
DEFINITION  probable ATP-dependent RNA helicase DDX20 [Pyrgilauda ruficollis].
ACCESSION   XP_041323763
VERSION     XP_041323763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="probable ATP-dependent RNA helicase DDX20"
                     /calculated_mol_wt=38075
     Region          34..226
                     /region_name="DEADc_DDX20"
                     /note="DEAD-box helicase domain of DEAD box protein 20;
                     cd17943"
                     /db_xref="CDD:350701"
     Site            order(43,45,47,50,68..75)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350701"
     Region          237..>331
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..347
                     /gene="DDX20"
                     /coded_by="XM_041467829.1:11..1054"
                     /db_xref="GeneID:121353727"
ORIGIN      
        1 maapmeaagr frtrdvllpg gpsdfgslll sppvlaglea agfhrpspvq lkaiplgrcg
       61 ldlivqaksg tgktcvfati aldavlldsp atqililapt reiavqihav ittigikmeg
      121 lechvfiggt plsqdrsrlk kchiavgspg rikqlieley lstasvrllv ldeadkllee
      181 gsfqeqvnwi ysslpvnkqm lavsatypes laaaltrymr eptfvrlnpt dpsllglkqy
      241 ykivnshplp hktfeektqh lqelfskipf nqalvfsnlh sraqhlaeil tsrgfpaeci
      301 sgnmnqsqrl damaklkqfh crvlistdlv scycfqtsfl qillqiy
//
LOCUS       XP_041323774             912 aa            linear   VRT 06-MAY-2021
DEFINITION  metabotropic glutamate receptor 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323774
VERSION     XP_041323774.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467840.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="metabotropic glutamate receptor 4"
                     /calculated_mol_wt=101552
     Region          43..508
                     /region_name="PBP1_mGluR_groupIII"
                     /note="ligand-binding domain of the group III metabotropic
                     glutamate receptor; cd06376"
                     /db_xref="CDD:380599"
     Site            order(56,71,74,157,159,229..230)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380599"
     Site            order(113,116,164,167,190,255)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:380599"
     Region          516..566
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          586..912
                     /region_name="7tmC_mGluR4"
                     /note="metabotropic glutamate receptor 4 in group 3,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15452"
                     /db_xref="CDD:320568"
     Region          586..611
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320568"
     Site            order(589,592..593,596..597,599..600,634,638,641..642,650,
                     654)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320568"
     Region          623..644
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320568"
     Site            order(643,655..656,659..660,663,748,753,756..757,760,794,
                     797..798,801,805,818..819,822,825,829)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320568"
     Region          653..677
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320568"
     Region          699..719
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320568"
     Region          749..775
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320568"
     Region          783..806
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320568"
     Region          816..841
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320568"
     CDS             1..912
                     /gene="GRM4"
                     /coded_by="XM_041467840.1:350..3088"
                     /db_xref="GeneID:121353738"
ORIGIN      
        1 msgghfcmer lsfclllsaw swgwapggaa kpkgqgyphm nsiridgdit lgglfpvhgr
       61 gaegkacgel kkekgihrle amlfaldrin ndpdllpnit lgarildtcs rdthaleqsl
      121 tfvqaliekd stevrcvsgg ppiitkperv vgvigasgss vsimvanilr lfkipqisya
      181 stapdlsdns rydffsrvvp sdtyqaqamv divkalkwny vstlasegsy gesgveafiq
      241 ksredggvcv aqsvkiprep kpgefdkiir rlletshara viifaneddi rrvleaakra
      301 nqtghfiwmg sdswgskiap vlhleevaeg svtilpkrvs vrgfdryfss rtldnnrrni
      361 wfaefweenf hcklsrhalr kgsnikkctn rerigqdssy eqegkvqfvi davyamghal
      421 hnmhkklcpg kvglcpsmdp vdgvellkyi rnvnfsgiag tpvtfnengd apgrydiyqy
      481 qirnstpeyk vigqwtdhlh lkvenmlwpg ggsqqpssic slpckpgerk klvkgipccw
      541 hcercdgyqy qldefhckrc hfnerpnenh tsctpipiik lewsspwavv pvfiaivgii
      601 atlfvvitfv ryndtpivka sgrelsyvll tgiflcyatt flmiaepdls tcslrriflg
      661 lgmsisyaal ltktnriyri feqgkksvsa prfispasql vitfslislq lvgvciwfiv
      721 dpshsvidye dqrttnphfa rgilkcdisd lslicllgys mllmvtctvy aiktrgvpet
      781 fneakpigft myttcivwla fipiffgtsq saekmyiqtt tltisvslsa svslgmlymp
      841 kvyiilfhpe qnvpkrkrsl kavvtaatms nkfsqkggfr pngeakselc enletqalat
      901 kqtyvsysnh ai
//
LOCUS       XP_041323783             912 aa            linear   VRT 06-MAY-2021
DEFINITION  metabotropic glutamate receptor 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323783
VERSION     XP_041323783.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467849.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="metabotropic glutamate receptor 4"
                     /calculated_mol_wt=101552
     Region          43..508
                     /region_name="PBP1_mGluR_groupIII"
                     /note="ligand-binding domain of the group III metabotropic
                     glutamate receptor; cd06376"
                     /db_xref="CDD:380599"
     Site            order(56,71,74,157,159,229..230)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380599"
     Site            order(113,116,164,167,190,255)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:380599"
     Region          516..566
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          586..912
                     /region_name="7tmC_mGluR4"
                     /note="metabotropic glutamate receptor 4 in group 3,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15452"
                     /db_xref="CDD:320568"
     Region          586..611
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320568"
     Site            order(589,592..593,596..597,599..600,634,638,641..642,650,
                     654)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:320568"
     Region          623..644
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320568"
     Site            order(643,655..656,659..660,663,748,753,756..757,760,794,
                     797..798,801,805,818..819,822,825,829)
                     /site_type="other"
                     /note="putative allosteric modulator binding site
                     [chemical binding]"
                     /db_xref="CDD:320568"
     Region          653..677
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320568"
     Region          699..719
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320568"
     Region          749..775
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320568"
     Region          783..806
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320568"
     Region          816..841
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320568"
     CDS             1..912
                     /gene="GRM4"
                     /coded_by="XM_041467849.1:366..3104"
                     /db_xref="GeneID:121353738"
ORIGIN      
        1 msgghfcmer lsfclllsaw swgwapggaa kpkgqgyphm nsiridgdit lgglfpvhgr
       61 gaegkacgel kkekgihrle amlfaldrin ndpdllpnit lgarildtcs rdthaleqsl
      121 tfvqaliekd stevrcvsgg ppiitkperv vgvigasgss vsimvanilr lfkipqisya
      181 stapdlsdns rydffsrvvp sdtyqaqamv divkalkwny vstlasegsy gesgveafiq
      241 ksredggvcv aqsvkiprep kpgefdkiir rlletshara viifaneddi rrvleaakra
      301 nqtghfiwmg sdswgskiap vlhleevaeg svtilpkrvs vrgfdryfss rtldnnrrni
      361 wfaefweenf hcklsrhalr kgsnikkctn rerigqdssy eqegkvqfvi davyamghal
      421 hnmhkklcpg kvglcpsmdp vdgvellkyi rnvnfsgiag tpvtfnengd apgrydiyqy
      481 qirnstpeyk vigqwtdhlh lkvenmlwpg ggsqqpssic slpckpgerk klvkgipccw
      541 hcercdgyqy qldefhckrc hfnerpnenh tsctpipiik lewsspwavv pvfiaivgii
      601 atlfvvitfv ryndtpivka sgrelsyvll tgiflcyatt flmiaepdls tcslrriflg
      661 lgmsisyaal ltktnriyri feqgkksvsa prfispasql vitfslislq lvgvciwfiv
      721 dpshsvidye dqrttnphfa rgilkcdisd lslicllgys mllmvtctvy aiktrgvpet
      781 fneakpigft myttcivwla fipiffgtsq saekmyiqtt tltisvslsa svslgmlymp
      841 kvyiilfhpe qnvpkrkrsl kavvtaatms nkfsqkggfr pngeakselc enletqalat
      901 kqtyvsysnh ai
//
LOCUS       XP_041323796             445 aa            linear   VRT 06-MAY-2021
DEFINITION  protein kinase C and casein kinase substrate in neurons protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323796
VERSION     XP_041323796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="protein kinase C and casein kinase substrate in
                     neurons protein 1"
                     /calculated_mol_wt=50823
     Region          19..276
                     /region_name="F-BAR_PACSIN1"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein
                     kinase Substrate in Neurons 1 (PACSIN1); cd07680"
                     /db_xref="CDD:153364"
     Site            order(19..21,27..28,31,34,37..38,41..42,44..45,48..49,
                     52..53,55..56,59..60,63,66..67,84,87,90,98,146,150,157,
                     160..161,164..165,209,213,224,228,231,235,238..239,
                     241..242,245..246,249..250,252..253,256..260,264..265,
                     268..269,271..272,275..276)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153364"
     Site            order(26,30,36,47,51,54,65..66,73,102,114,133,140..141,
                     148..149,151,158,204,208,211)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153364"
     Region          389..444
                     /region_name="SH3_PACSIN1-2"
                     /note="Src homology 3 domain of Protein kinase C and
                     Casein kinase Substrate in Neurons 1 (PACSIN1) and PACSIN
                     2; cd11998"
                     /db_xref="CDD:212931"
     Site            order(395,397,400,404,423..424,438,440..441)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212931"
     CDS             1..445
                     /gene="PACSIN1"
                     /coded_by="XM_041467862.1:208..1545"
                     /db_xref="GeneID:121353748"
ORIGIN      
        1 msgsydesas aaeettdsfw evgnykrtvk riddghrlcn dlmncvhera kieksyaqql
       61 tdwskrwrql iekgpqygsl ekawaaimte adkvselhqe vknsllnddf ekvknwqkda
      121 yhkqimggfk eakeaedgfr kaqkpwakkl keletakkay hlackeekla mtreanskad
      181 qsntpeqqkk lqdkvekckq dvqktqekye kvldelnkct pqyiesmeqv feqcqqfeek
      241 rlnflkemll dikrhlnlae sssyanvyre leqtirmsda qedlrwfrst sgpgmpmnwp
      301 qfeewnpdlt htitrkekqk kgegvaltna ssagdtgaqa gergsvsshd rgqtysaews
      361 ddegsnsfnt seangganpf deesagkgvr vralydydgq eqdelsfkag deltklgeed
      421 eqgwckgrld ngqlglypan yveai
//
LOCUS       XP_041323808             165 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323808
VERSION     XP_041323808.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467874.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="40S ribosomal protein S10"
                     /calculated_mol_wt=18779
     Region          3..97
                     /region_name="S10_plectin"
                     /note="Plectin/S10 domain; pfam03501"
                     /db_xref="CDD:427337"
     CDS             1..165
                     /gene="RPS10"
                     /coded_by="XM_041467874.1:104..601"
                     /db_xref="GeneID:121353757"
ORIGIN      
        1 mlmpkknria iyellfkegv mvakkdvhmp khpelvdknv pnlhvmkamq slksrgyvke
       61 qfawrhfywy ltnegiqylr dylhlppeiv patlrrsrpe tgrprpkgle gerparltrg
      121 eadrdtyrrs avppgadkka eagagaatef qfrggfgrgr gqppq
//
LOCUS       XP_041323821             337 aa            linear   VRT 06-MAY-2021
DEFINITION  SAM pointed domain-containing Ets transcription factor [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323821
VERSION     XP_041323821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="SAM pointed domain-containing Ets transcription
                     factor"
                     /calculated_mol_wt=37647
     Region          138..218
                     /region_name="SAM_PNT-PDEF-like"
                     /note="Sterile alpha motif (SAM)/Pointed domain of
                     prostate-derived ETS factor; cd08532"
                     /db_xref="CDD:188878"
     Region          250..336
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..337
                     /gene="SPDEF"
                     /coded_by="XM_041467887.1:136..1149"
                     /db_xref="GeneID:121353765"
ORIGIN      
        1 mgsaspglta lppgrlawpd pallppprdp dprswgcpes psppstpeqp lpafclhyfd
       61 mlypedtawa skgsgeaahs sgqggreear kepeqcpiid sqglglgpeg dlqdslhlee
      121 hsleqvqsmv vgevlkdiet ackllniaad pmdwspgnvq kwilwtehqy rlpqigksfq
      181 elsgkdlcam seeqfcqrsp acgdilhahl diwksaawmk ekaapgdvry cggdtswads
      241 evdsscagqp ihlwqflkel llkphnygrf irwlnkdkgi fkiedsaqva rlwgirknrp
      301 amnydklsrs irqyykkgii rkpdisqrlv yqfvhpv
//
LOCUS       XP_041323833             291 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ILRUN [Pyrgilauda ruficollis].
ACCESSION   XP_041323833
VERSION     XP_041323833.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467899.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="protein ILRUN"
                     /calculated_mol_wt=31848
     Region          23..64
                     /region_name="UBA_CF106"
                     /note="UBA-like domain found in uncharacterized protein
                     C6orf106 and similar proteins; cd14349"
                     /db_xref="CDD:270534"
     Region          82..179
                     /region_name="N_BRCA1_IG"
                     /note="Ig-like domain from next to BRCA1 gene; pfam16158"
                     /db_xref="CDD:465035"
     CDS             1..291
                     /gene="ILRUN"
                     /coded_by="XM_041467899.1:67..942"
                     /db_xref="GeneID:121353773"
ORIGIN      
        1 megmdvdlda elmqkfsclg ttdkdvlige fqrllgfqls pagcaffldm tnwnlqaaig
       61 ayydfespni nvpsmsfved vtigegesip pdtqftktwr iqntgteawp pgvclkyvgg
      121 dqfghvnmvm vrslepqema dvsvqmcsps tagmyqgqwr mctatglyyg dviwvilsve
      181 aggllgvtqq lssfetefnt qphrkvegnf npfaspqknr qpdennlkdp ggselgtisk
      241 ntwgpapdqi eqdqnglsqn svnlspsshs nnlsvvtysk gfhgpyhfgq s
//
LOCUS       XP_041323844             169 aa            linear   VRT 06-MAY-2021
DEFINITION  diphosphoinositol polyphosphate phosphohydrolase 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323844
VERSION     XP_041323844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467910.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..169
                     /product="diphosphoinositol polyphosphate phosphohydrolase
                     1 isoform X1"
                     /calculated_mol_wt=19118
     Region          19..143
                     /region_name="NUDIX_DIPP2_like_Nudt4"
                     /note="diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase
                     type 2 and similar proteins; cd04666"
                     /db_xref="CDD:467551"
     CDS             1..169
                     /gene="NUDT3"
                     /coded_by="XM_041467910.1:253..762"
                     /db_xref="GeneID:121353782"
ORIGIN      
        1 mmklksnqtr tydgdgykkr aaclcfrses eeevllvsss rhpdrwivpg ggmepeeepg
       61 vaavrevcee agvkgtlgrl vgifenrdrk hrtyvyvliv tevledweds vnigrkrewf
      121 kiedaikvlq yhkpvqasyf etlrqgclan ngtpvmttpy sessvsdir
//
LOCUS       XP_041323855             146 aa            linear   VRT 06-MAY-2021
DEFINITION  diphosphoinositol polyphosphate phosphohydrolase 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323855
VERSION     XP_041323855.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467921.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..146
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..146
                     /product="diphosphoinositol polyphosphate phosphohydrolase
                     1 isoform X2"
                     /calculated_mol_wt=16339
     Region          10..120
                     /region_name="NUDIX_DIPP2_like_Nudt4"
                     /note="diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase
                     type 2 and similar proteins; cd04666"
                     /db_xref="CDD:467551"
     CDS             1..146
                     /gene="NUDT3"
                     /coded_by="XM_041467921.1:330..770"
                     /db_xref="GeneID:121353782"
ORIGIN      
        1 mdassrlscq vllvsssrhp drwivpgggm epeeepgvaa vrevceeagv kgtlgrlvgi
       61 fenrdrkhrt yvyvlivtev ledwedsvni grkrewfkie daikvlqyhk pvqasyfetl
      121 rqgclanngt pvmttpyses svsdir
//
LOCUS       XP_041323870             100 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 29 [Pyrgilauda ruficollis].
ACCESSION   XP_041323870
VERSION     XP_041323870.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467936.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..100
                     /product="small integral membrane protein 29"
                     /calculated_mol_wt=10735
     CDS             1..100
                     /gene="SMIM29"
                     /coded_by="XM_041467936.1:604..906"
                     /db_xref="GeneID:121353798"
ORIGIN      
        1 msnataptap gaagdslvgs vlgpfllltl lgallaavmy vkkrrsdrlr hrllpmysyd
       61 paeeppeseq ellveaeeaq vvpgwggpsp swpprrdwra
//
LOCUS       XP_041323879             100 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 29 [Pyrgilauda ruficollis].
ACCESSION   XP_041323879
VERSION     XP_041323879.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467945.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..100
                     /product="small integral membrane protein 29"
                     /calculated_mol_wt=10735
     CDS             1..100
                     /gene="SMIM29"
                     /coded_by="XM_041467945.1:416..718"
                     /db_xref="GeneID:121353798"
ORIGIN      
        1 msnataptap gaagdslvgs vlgpfllltl lgallaavmy vkkrrsdrlr hrllpmysyd
       61 paeeppeseq ellveaeeaq vvpgwggpsp swpprrdwra
//
LOCUS       XP_041323893              97 aa            linear   VRT 06-MAY-2021
DEFINITION  high mobility group protein HMG-I/HMG-Y isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323893
VERSION     XP_041323893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467959.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..97
                     /product="high mobility group protein HMG-I/HMG-Y isoform
                     X1"
                     /calculated_mol_wt=10571
     CDS             1..97
                     /gene="HMGA1"
                     /coded_by="XM_041467959.1:205..498"
                     /db_xref="GeneID:121353805"
ORIGIN      
        1 msessakssq plaskgekdv sekrgrgrpr kkpqqepsea ptpkrprgrp kgsknkatpk
       61 grkaavtpgr kprgrpkksq qdeeevnisq esseeeq
//
LOCUS       XP_041323900              96 aa            linear   VRT 06-MAY-2021
DEFINITION  high mobility group protein HMG-I/HMG-Y isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323900
VERSION     XP_041323900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="high mobility group protein HMG-I/HMG-Y isoform
                     X2"
                     /calculated_mol_wt=10443
     CDS             1..96
                     /gene="HMGA1"
                     /coded_by="XM_041467966.1:205..495"
                     /db_xref="GeneID:121353805"
ORIGIN      
        1 msessakssq plaskgekdv sekrgrgrpr kkpqepseap tpkrprgrpk gsknkatpkg
       61 rkaavtpgrk prgrpkksqq deeevnisqe sseeeq
//
LOCUS       XP_041323910              80 aa            linear   VRT 06-MAY-2021
DEFINITION  high mobility group protein HMG-I/HMG-Y isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323910
VERSION     XP_041323910.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467976.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..80
                     /product="high mobility group protein HMG-I/HMG-Y isoform
                     X3"
                     /calculated_mol_wt=8551
     CDS             1..80
                     /gene="HMGA1"
                     /coded_by="XM_041467976.1:281..523"
                     /db_xref="GeneID:121353805"
ORIGIN      
        1 msessakssq plaskgekdv sekrgrgrpr kkpqqepsea ptpkrprgrp kgsknkatpk
       61 grkaavtpgr kprgrpkksv
//
LOCUS       XP_041323921             331 aa            linear   VRT 06-MAY-2021
DEFINITION  PAK4-inhibitor INKA2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323921
VERSION     XP_041323921.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467987.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="PAK4-inhibitor INKA2 isoform X1"
                     /calculated_mol_wt=36059
     Region          139..202
                     /region_name="FAM212"
                     /note="FAM212 family; pfam15342"
                     /db_xref="CDD:434651"
     CDS             1..331
                     /gene="INKA2"
                     /coded_by="XM_041467987.1:51..1046"
                     /db_xref="GeneID:121353824"
ORIGIN      
        1 meqhlrrlrq ellsmkevgd glheqmtcmm galqelkllq vqtalerldi sgrrspseqr
       61 rccrggagpg rdplpggaqg qcppalpcpl prpasssqpa alaesdhpgd spcssrslcg
      121 dgpcppkgps sgstghgqpc apepskqgta gawppcqecp gcddghdwts slmsqsrnrq
      181 plvlgdnifa dlvgnwldlp eldkkgekge aslsvsrsqe lcrkfsltan ifkkflrsvr
      241 pdrdrllkek pcwlppedkq pqiskrskki nklkgtfylp lhgnlqshhs kaercprads
      301 rseppkmgtr kvpdprdysp agfdintavw v
//
LOCUS       XP_041323928             317 aa            linear   VRT 06-MAY-2021
DEFINITION  PAK4-inhibitor INKA2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323928
VERSION     XP_041323928.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467994.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..317
                     /product="PAK4-inhibitor INKA2 isoform X2"
                     /calculated_mol_wt=34268
     Region          125..188
                     /region_name="FAM212"
                     /note="FAM212 family; pfam15342"
                     /db_xref="CDD:434651"
     CDS             1..317
                     /gene="INKA2"
                     /coded_by="XM_041467994.1:154..1107"
                     /db_xref="GeneID:121353824"
ORIGIN      
        1 mkevgdglhe qmtcmmgalq elkllqvqta lerldisgrr spseqrrccr ggagpgrdpl
       61 pggaqgqcpp alpcplprpa sssqpaalae sdhpgdspcs srslcgdgpc ppkgpssgst
      121 ghgqpcapep skqgtagawp pcqecpgcdd ghdwtsslms qsrnrqplvl gdnifadlvg
      181 nwldlpeldk kgekgeasls vsrsqelcrk fsltanifkk flrsvrpdrd rllkekpcwl
      241 ppedkqpqis krskkinklk gtfylplhgn lqshhskaer cpradsrsep pkmgtrkvpd
      301 prdyspagfd intavwv
//
LOCUS       XP_041323939            1153 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323939
VERSION     XP_041323939.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468005.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1153
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X1"
                     /calculated_mol_wt=124743
     Region          66..309
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          114..169
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(171,173,177..178,181..183,185..186,190,193,202,204,
                     206,210..211,214..216,218..219,223,226,235,237,239,
                     243..244,247..249,251..252,256,259)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          171..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          204..235
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          237..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          270..300
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          710..776
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(732..735,737,739..740,743..744,746..747,750,
                     753..754)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          781..845
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(831..834,836..837)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          939..1083
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(958,1033,1053)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(1022..1027,1040,1064,1068)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..1153
                     /gene="ANKS1A"
                     /coded_by="XM_041468005.1:11..3472"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mgkeqellea artgnlpave kllsgkrlss gfggsggggg ssggsagggg ggsggsvgvg
       61 hplssllsiw rgpnvncvds tgytplhhaa lnghkdvvev llrndaltnv adckgcyplh
      121 laawkgdadi vkllihqgps htkvneqnal eikelkkygp fdpyinaknn dnetalhcaa
      181 qhghtevvkv lleeltdptm rnnkfetpld laalygrlev vkmllnahpn llscntkkht
      241 plhlaarngh kavvhvllda gmdsnyqtek gsalheaalf gktdvvqill aagidvnikd
      301 nrgltaldiv relpsqksqh iaaliedytv gkksakavek sapaplaaat dpsgrtsqgd
      361 vdkavtelii dfdvnpeees pyealynats chsldslasg kssdresgnk eaepsglkaa
      421 avrprerppp pakpppdeee eqnvekktgh sapceasaar gksrgsgaee eehpyelllt
      481 aetkkpvavd rktkdhrrss ggrsqdsaes qdiqvpeqfs gllhgsspic eisedpfrla
      541 sseekgdtea tshpaamqle daeltssgpa rssspdptqt vvyatvqhvs radpaaavtp
      601 hvqqhpggae pegdravgra hpgskpkael klsrslsksd sdlltcspte ddamgsrses
      661 lsncstgkkr lekspsfase wdeiekimss igegidfsqe qhrisgsrml eqsvgewles
      721 iglqqyeskl llngfddvrf lgcnvmedqd lrdigigdpq hrrkllqaar slpklkplgc
      781 dgnsqpsvpa wldslglqdy iqsflssgys sidtvknlwe leivnvlkvn llghrkriia
      841 sladrpyeep pakpprfsql rcqdlmsqts splsqndsct grsadlllps gdtakrqhdr
      901 gtevapysra erykaqedrr esrltlrpps laapyapvqn wqhqpeklif escgyeanyl
      961 gsmlikdlrg testqdacak mrkstehmkk iptiilsity kgvkfidasn knviaeheir
     1021 niscaaqdpe dlctfayitk dlqtshhych vfstvdvnlt yeiiltlgqa fevayqlalq
     1081 aqrakplgag agemietkss kpvpkpragm rksaldppev dqdsqshasv swvvdpkqds
     1141 krtlstkyet tif
//
LOCUS       XP_041323947            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323947
VERSION     XP_041323947.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468013.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X2"
                     /calculated_mol_wt=124262
     Region          66..309
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          114..169
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(171,173,177..178,181..183,185..186,190,193,202,204,
                     206,210..211,214..216,218..219,223,226,235,237,239,
                     243..244,247..249,251..252,256,259)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          171..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          204..235
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          237..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          270..300
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          710..776
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(732..735,737,739..740,743..744,746..747,750,
                     753..754)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          781..845
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(831..834,836..837)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          939..1083
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(958,1033,1053)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(1022..1027,1040,1064,1068)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..1150
                     /gene="ANKS1A"
                     /coded_by="XM_041468013.1:11..3463"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mgkeqellea artgnlpave kllsgkrlss gfggsggggg ssggsagggg ggsggsvgvg
       61 hplssllsiw rgpnvncvds tgytplhhaa lnghkdvvev llrndaltnv adckgcyplh
      121 laawkgdadi vkllihqgps htkvneqnal eikelkkygp fdpyinaknn dnetalhcaa
      181 qhghtevvkv lleeltdptm rnnkfetpld laalygrlev vkmllnahpn llscntkkht
      241 plhlaarngh kavvhvllda gmdsnyqtek gsalheaalf gktdvvqill aagidvnikd
      301 nrgltaldiv relpsqksqh iaaliedytv gkksakavek sapaplaaat dpsgrtsqgd
      361 vdkavtelii dfdvnpeees pyealynats chsldslasg kssdresgnk eaepsglkaa
      421 avrprerppp pakpppdeee eqnvekktgh sapceasaar gksrgsgaee eehpyelllt
      481 aetkkpvavd rktkdhrrss ggrsqdsaes qdiqvpeqfs gllhgsspic eisedpfrla
      541 sseekgdtea tshpaamqle daeltssgpa rssspdptqt vvyatvqhvs radpaaavtp
      601 hvqqhpggae pegdravgra hpgskpkael klsrslsksd sdlltcspte ddamgsrses
      661 lsncstgkkr lekspsfase wdeiekimss igegidfsqe qhrisgsrml eqsvgewles
      721 iglqqyeskl llngfddvrf lgcnvmedqd lrdigigdpq hrrkllqaar slpklkplgc
      781 dgnsqpsvpa wldslglqdy iqsflssgys sidtvknlwe leivnvlkvn llghrkriia
      841 sladrpyeep pakpprfsql rcqdlmsqts splsqndsct grsadlllps gdtakrqhdr
      901 gtevapysra erykaqedrr esrltlrpps laapyapvqn wqhqpeklif escgyeanyl
      961 gsmlikdlrg testqdacak mrkstehmkk iptiilsity kgvkfidasn knviaeheir
     1021 niscaaqdpe dlctfayitk dlqtshhych vfstvdvnlt yeiiltlgqa fevayqlalq
     1081 aqrakplgag agemietkss kpvpkpragm rksaldppev dqdsqshasv swvvdpkqds
     1141 krtlstncsp
//
LOCUS       XP_041323957            1147 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323957
VERSION     XP_041323957.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468023.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1147
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X3"
                     /calculated_mol_wt=123974
     Region          66..309
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          114..169
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(171,173,177..178,181..183,185..186,190,193,202,204,
                     206,210..211,214..216,218..219,223,226,235,237,239,
                     243..244,247..249,251..252,256,259)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          171..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          204..235
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          237..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          270..300
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          710..776
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(732..735,737,739..740,743..744,746..747,750,
                     753..754)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          781..845
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(831..834,836..837)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          939..1083
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(958,1033,1053)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(1022..1027,1040,1064,1068)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..1147
                     /gene="ANKS1A"
                     /coded_by="XM_041468023.1:11..3454"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mgkeqellea artgnlpave kllsgkrlss gfggsggggg ssggsagggg ggsggsvgvg
       61 hplssllsiw rgpnvncvds tgytplhhaa lnghkdvvev llrndaltnv adckgcyplh
      121 laawkgdadi vkllihqgps htkvneqnal eikelkkygp fdpyinaknn dnetalhcaa
      181 qhghtevvkv lleeltdptm rnnkfetpld laalygrlev vkmllnahpn llscntkkht
      241 plhlaarngh kavvhvllda gmdsnyqtek gsalheaalf gktdvvqill aagidvnikd
      301 nrgltaldiv relpsqksqh iaaliedytv gkksakavek sapaplaaat dpsgrtsqgd
      361 vdkavtelii dfdvnpeees pyealynats chsldslasg kssdresgnk eaepsglkaa
      421 avrprerppp pakpppdeee eqnvekktgh sapceasaar gksrgsgaee eehpyelllt
      481 aetkkpvavd rktkdhrrss ggrsqdsaes qdiqvpeqfs gllhgsspic eisedpfrla
      541 sseekgdtea tshpaamqle daeltssgpa rssspdptqt vvyatvqhvs radpaaavtp
      601 hvqqhpggae pegdravgra hpgskpkael klsrslsksd sdlltcspte ddamgsrses
      661 lsncstgkkr lekspsfase wdeiekimss igegidfsqe qhrisgsrml eqsvgewles
      721 iglqqyeskl llngfddvrf lgcnvmedqd lrdigigdpq hrrkllqaar slpklkplgc
      781 dgnsqpsvpa wldslglqdy iqsflssgys sidtvknlwe leivnvlkvn llghrkriia
      841 sladrpyeep pakpprfsql rcqdlmsqts splsqndsct grsadlllps gdtakrqhdr
      901 gtevapysra erykaqedrr esrltlrpps laapyapvqn wqhqpeklif escgyeanyl
      961 gsmlikdlrg testqdacak mrkstehmkk iptiilsity kgvkfidasn knviaeheir
     1021 niscaaqdpe dlctfayitk dlqtshhych vfstvdvnlt yeiiltlgqa fevayqlalq
     1081 aqrakplgag agemietkss kpvpkpragm rksaldppev dqdsqshasv swvvdpkqds
     1141 krtlstn
//
LOCUS       XP_041323965            1132 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323965
VERSION     XP_041323965.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468031.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1132
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X4"
                     /calculated_mol_wt=122309
     Region          66..288
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(83,87..88,91..93,95..96,100,103,112,114,116,
                     120..121,124..126,128..129,133,136,148,150,152,156..157,
                     160..162,164..165,169,172,181)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          114..148
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          150..181
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          183..214
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          216..246
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          249..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          689..755
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(711..714,716,718..719,722..723,725..726,729,
                     732..733)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          760..824
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(810..813,815..816)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          918..1062
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(937,1012,1032)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(1001..1006,1019,1043,1047)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..1132
                     /gene="ANKS1A"
                     /coded_by="XM_041468031.1:11..3409"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mgkeqellea artgnlpave kllsgkrlss gfggsggggg ssggsagggg ggsggsvgvg
       61 hplssllsiw rgpnvncvds tgytplhhaa lnghkdvvev llrndaltnv adckgcyplh
      121 laawkgdadi vkllihqgps htkvneqnnd netalhcaaq hghtevvkvl leeltdptmr
      181 nnkfetpldl aalygrlevv kmllnahpnl lscntkkhtp lhlaarnghk avvhvlldag
      241 mdsnyqtekg salheaalfg ktdvvqilla agidvnikdn rgltaldivr elpsqksqhi
      301 aaliedytvg kksakaveks apaplaaatd psgrtsqgdv dkavteliid fdvnpeeesp
      361 yealynatsc hsldslasgk ssdresgnke aepsglkaaa vrprerpppp akpppdeeee
      421 qnvekktghs apceasaarg ksrgsgaeee ehpyelllta etkkpvavdr ktkdhrrssg
      481 grsqdsaesq diqvpeqfsg llhgsspice isedpfrlas seekgdteat shpaamqled
      541 aeltssgpar ssspdptqtv vyatvqhvsr adpaaavtph vqqhpggaep egdravgrah
      601 pgskpkaelk lsrslsksds dlltcspted damgsrsesl sncstgkkrl ekspsfasew
      661 deiekimssi gegidfsqeq hrisgsrmle qsvgewlesi glqqyeskll lngfddvrfl
      721 gcnvmedqdl rdigigdpqh rrkllqaars lpklkplgcd gnsqpsvpaw ldslglqdyi
      781 qsflssgyss idtvknlwel eivnvlkvnl lghrkriias ladrpyeepp akpprfsqlr
      841 cqdlmsqtss plsqndsctg rsadlllpsg dtakrqhdrg tevapysrae rykaqedrre
      901 srltlrppsl aapyapvqnw qhqpeklife scgyeanylg smlikdlrgt estqdacakm
      961 rkstehmkki ptiilsityk gvkfidasnk nviaeheirn iscaaqdped lctfayitkd
     1021 lqtshhychv fstvdvnlty eiiltlgqaf evayqlalqa qrakplgaga gemietkssk
     1081 pvpkpragmr ksaldppevd qdsqshasvs wvvdpkqdsk rtlstkyett if
//
LOCUS       XP_041323974            1121 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323974
VERSION     XP_041323974.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468040.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1121
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X5"
                     /calculated_mol_wt=121558
     Region          66..309
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          114..169
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(171,173,177..178,181..183,185..186,190,193,202,204,
                     206,210..211,214..216,218..219,223,226,235,237,239,
                     243..244,247..249,251..252,256,259)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          171..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          204..235
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          237..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          270..300
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          274..363
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          302..345
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          678..744
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(700..703,705,707..708,711..712,714..715,718,
                     721..722)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          749..813
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(799..802,804..805)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          907..1051
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(926,1001,1021)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(990..995,1008,1032,1036)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..1121
                     /gene="ANKS1A"
                     /coded_by="XM_041468040.1:11..3376"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mgkeqellea artgnlpave kllsgkrlss gfggsggggg ssggsagggg ggsggsvgvg
       61 hplssllsiw rgpnvncvds tgytplhhaa lnghkdvvev llrndaltnv adckgcyplh
      121 laawkgdadi vkllihqgps htkvneqnal eikelkkygp fdpyinaknn dnetalhcaa
      181 qhghtevvkv lleeltdptm rnnkfetpld laalygrlev vkmllnahpn llscntkkht
      241 plhlaarngh kavvhvllda gmdsnyqtek gsalheaalf gktdvvqill aagidvnikd
      301 nrgltaldiv relpsqksqh iaaliegdvd kavteliidf dvnpeeespy ealynatsch
      361 sldslasgks sdresgnkea epsglkaaav rprerppppa kpppdeeeeq nvekktghsa
      421 pceasaargk srgsgaeeee hpyellltae tkkpvavdrk tkdhrrssgg rsqdsaesqd
      481 iqvpeqfsgl lhgsspicei sedpfrlass eekgdteats hpaamqleda eltssgpars
      541 sspdptqtvv yatvqhvsra dpaaavtphv qqhpggaepe gdravgrahp gskpkaelkl
      601 srslsksdsd lltcsptedd amgsrsesls ncstgkkrle kspsfasewd eiekimssig
      661 egidfsqeqh risgsrmleq svgewlesig lqqyesklll ngfddvrflg cnvmedqdlr
      721 digigdpqhr rkllqaarsl pklkplgcdg nsqpsvpawl dslglqdyiq sflssgyssi
      781 dtvknlwele ivnvlkvnll ghrkriiasl adrpyeeppa kpprfsqlrc qdlmsqtssp
      841 lsqndsctgr sadlllpsgd takrqhdrgt evapysraer ykaqedrres rltlrppsla
      901 apyapvqnwq hqpeklifes cgyeanylgs mlikdlrgte stqdacakmr kstehmkkip
      961 tiilsitykg vkfidasnkn viaeheirni scaaqdpedl ctfayitkdl qtshhychvf
     1021 stvdvnltye iiltlgqafe vayqlalqaq rakplgagag emietksskp vpkpragmrk
     1081 saldppevdq dsqshasvsw vvdpkqdskr tlstkyetti f
//
LOCUS       XP_041323983             954 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323983
VERSION     XP_041323983.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468049.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..954
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X6"
                     /calculated_mol_wt=104172
     Region          <2..150
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(7,11..12,15..17,19..20,24,27,36,38,40,44..45,48..50,
                     52..53,57,60,69,71,76..77,80..82,84..85,89,92,101)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          7..36
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..69
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          71..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          511..577
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(533..536,538,540..541,544..545,547..548,551,
                     554..555)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          582..646
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(632..635,637..638)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          740..884
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(759,834,854)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(823..828,841,865,869)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..954
                     /gene="ANKS1A"
                     /coded_by="XM_041468049.1:183..3047"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mrnnkfetpl dlaalygrle vvkmllnahp nllscntkkh tplhlaarng hkavvhvlld
       61 agmdsnyqte kgsalheaal fgktdvvqil laagidvnik dnrgltaldi vrelpsqksq
      121 hiaaliedyt vgkksakave ksapaplaaa tdpsgrtsqg dvdkavteli idfdvnpeee
      181 spyealynat schsldslas gkssdresgn keaepsglka aavrprerpp ppakpppdee
      241 eeqnvekktg hsapceasaa rgksrgsgae eeehpyelll taetkkpvav drktkdhrrs
      301 sggrsqdsae sqdiqvpeqf sgllhgsspi ceisedpfrl asseekgdte atshpaamql
      361 edaeltssgp arssspdptq tvvyatvqhv sradpaaavt phvqqhpgga epegdravgr
      421 ahpgskpkae lklsrslsks dsdlltcspt eddamgsrse slsncstgkk rlekspsfas
      481 ewdeiekims sigegidfsq eqhrisgsrm leqsvgewle siglqqyesk lllngfddvr
      541 flgcnvmedq dlrdigigdp qhrrkllqaa rslpklkplg cdgnsqpsvp awldslglqd
      601 yiqsflssgy ssidtvknlw eleivnvlkv nllghrkrii asladrpyee ppakpprfsq
      661 lrcqdlmsqt ssplsqndsc tgrsadlllp sgdtakrqhd rgtevapysr aerykaqedr
      721 resrltlrpp slaapyapvq nwqhqpekli fescgyeany lgsmlikdlr gtestqdaca
      781 kmrkstehmk kiptiilsit ykgvkfidas nknviaehei rniscaaqdp edlctfayit
      841 kdlqtshhyc hvfstvdvnl tyeiiltlgq afevayqlal qaqrakplga gagemietks
      901 skpvpkprag mrksaldppe vdqdsqshas vswvvdpkqd skrtlstkye ttif
//
LOCUS       XP_041323991            1186 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323991
VERSION     XP_041323991.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468057.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1186
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X7"
                     /calculated_mol_wt=128382
     Region          66..309
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          114..169
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(171,173,177..178,181..183,185..186,190,193,202,204,
                     206,210..211,214..216,218..219,223,226,235,237,239,
                     243..244,247..249,251..252,256,259)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          171..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          204..235
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          237..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          270..300
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          710..776
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(732..735,737,739..740,743..744,746..747,750,
                     753..754)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          781..845
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(831..834,836..837)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          939..1083
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(958,1033,1053)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(1022..1027,1040,1064,1068)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..1186
                     /gene="ANKS1A"
                     /coded_by="XM_041468057.1:11..3571"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mgkeqellea artgnlpave kllsgkrlss gfggsggggg ssggsagggg ggsggsvgvg
       61 hplssllsiw rgpnvncvds tgytplhhaa lnghkdvvev llrndaltnv adckgcyplh
      121 laawkgdadi vkllihqgps htkvneqnal eikelkkygp fdpyinaknn dnetalhcaa
      181 qhghtevvkv lleeltdptm rnnkfetpld laalygrlev vkmllnahpn llscntkkht
      241 plhlaarngh kavvhvllda gmdsnyqtek gsalheaalf gktdvvqill aagidvnikd
      301 nrgltaldiv relpsqksqh iaaliedytv gkksakavek sapaplaaat dpsgrtsqgd
      361 vdkavtelii dfdvnpeees pyealynats chsldslasg kssdresgnk eaepsglkaa
      421 avrprerppp pakpppdeee eqnvekktgh sapceasaar gksrgsgaee eehpyelllt
      481 aetkkpvavd rktkdhrrss ggrsqdsaes qdiqvpeqfs gllhgsspic eisedpfrla
      541 sseekgdtea tshpaamqle daeltssgpa rssspdptqt vvyatvqhvs radpaaavtp
      601 hvqqhpggae pegdravgra hpgskpkael klsrslsksd sdlltcspte ddamgsrses
      661 lsncstgkkr lekspsfase wdeiekimss igegidfsqe qhrisgsrml eqsvgewles
      721 iglqqyeskl llngfddvrf lgcnvmedqd lrdigigdpq hrrkllqaar slpklkplgc
      781 dgnsqpsvpa wldslglqdy iqsflssgys sidtvknlwe leivnvlkvn llghrkriia
      841 sladrpyeep pakpprfsql rcqdlmsqts splsqndsct grsadlllps gdtakrqhdr
      901 gtevapysra erykaqedrr esrltlrpps laapyapvqn wqhqpeklif escgyeanyl
      961 gsmlikdlrg testqdacak mrkstehmkk iptiilsity kgvkfidasn knviaeheir
     1021 niscaaqdpe dlctfayitk dlqtshhych vfstvdvnlt yeiiltlgqa fevayqlalq
     1081 aqrakplgag agemietkss kpvpkpragm rksavplppd trccychtct thrpsylplq
     1141 svspgvkldp pevdqdsqsh asvswvvdpk qdskrtlstk yettif
//
LOCUS       XP_041324001            1165 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SAM domain-containing protein 1A isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324001
VERSION     XP_041324001.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468067.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1165
                     /product="ankyrin repeat and SAM domain-containing protein
                     1A isoform X8"
                     /calculated_mol_wt=125949
     Region          66..288
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(83,87..88,91..93,95..96,100,103,112,114,116,
                     120..121,124..126,128..129,133,136,148,150,152,156..157,
                     160..162,164..165,169,172,181)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          114..148
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          150..181
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          183..214
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          216..246
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          249..279
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          689..755
                     /region_name="SAM_AIDA1AB-like_repeat1"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 1;
                     cd09499"
                     /db_xref="CDD:188898"
     Site            order(711..714,716,718..719,722..723,725..726,729,
                     732..733)
                     /site_type="other"
                     /note="intramolecular dimer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188898"
     Region          760..824
                     /region_name="SAM_AIDA1AB-like_repeat2"
                     /note="SAM domain of AIDA1AB-like proteins, repeat 2;
                     cd09500"
                     /db_xref="CDD:188899"
     Site            order(810..813,815..816)
                     /site_type="other"
                     /note="intramolecular dimer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188899"
     Region          918..1062
                     /region_name="PTB_Anks"
                     /note="Ankyrin repeat and sterile alpha motif (SAM)
                     domain-containing (Anks) protein family
                     Phosphotyrosine-binding (PTB) domain; cd01274"
                     /db_xref="CDD:269972"
     Site            order(937,1012,1032)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269972"
     Site            order(1001..1006,1019,1043,1047)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269972"
     CDS             1..1165
                     /gene="ANKS1A"
                     /coded_by="XM_041468067.1:11..3508"
                     /db_xref="GeneID:121353841"
ORIGIN      
        1 mgkeqellea artgnlpave kllsgkrlss gfggsggggg ssggsagggg ggsggsvgvg
       61 hplssllsiw rgpnvncvds tgytplhhaa lnghkdvvev llrndaltnv adckgcyplh
      121 laawkgdadi vkllihqgps htkvneqnnd netalhcaaq hghtevvkvl leeltdptmr
      181 nnkfetpldl aalygrlevv kmllnahpnl lscntkkhtp lhlaarnghk avvhvlldag
      241 mdsnyqtekg salheaalfg ktdvvqilla agidvnikdn rgltaldivr elpsqksqhi
      301 aaliedytvg kksakaveks apaplaaatd psgrtsqgdv dkavteliid fdvnpeeesp
      361 yealynatsc hsldslasgk ssdresgnke aepsglkaaa vrprerpppp akpppdeeee
      421 qnvekktghs apceasaarg ksrgsgaeee ehpyelllta etkkpvavdr ktkdhrrssg
      481 grsqdsaesq diqvpeqfsg llhgsspice isedpfrlas seekgdteat shpaamqled
      541 aeltssgpar ssspdptqtv vyatvqhvsr adpaaavtph vqqhpggaep egdravgrah
      601 pgskpkaelk lsrslsksds dlltcspted damgsrsesl sncstgkkrl ekspsfasew
      661 deiekimssi gegidfsqeq hrisgsrmle qsvgewlesi glqqyeskll lngfddvrfl
      721 gcnvmedqdl rdigigdpqh rrkllqaars lpklkplgcd gnsqpsvpaw ldslglqdyi
      781 qsflssgyss idtvknlwel eivnvlkvnl lghrkriias ladrpyeepp akpprfsqlr
      841 cqdlmsqtss plsqndsctg rsadlllpsg dtakrqhdrg tevapysrae rykaqedrre
      901 srltlrppsl aapyapvqnw qhqpeklife scgyeanylg smlikdlrgt estqdacakm
      961 rkstehmkki ptiilsityk gvkfidasnk nviaeheirn iscaaqdped lctfayitkd
     1021 lqtshhychv fstvdvnlty eiiltlgqaf evayqlalqa qrakplgaga gemietkssk
     1081 pvpkpragmr ksavplppdt rccychtctt hrpsylplqs vspgvkldpp evdqdsqsha
     1141 svswvvdpkq dskrtlstky ettif
//
LOCUS       XP_041324006             359 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324006
VERSION     XP_041324006.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468072.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..359
                     /product="tubby-related protein 1 isoform X1"
                     /calculated_mol_wt=40347
     Region          114..354
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..359
                     /gene="TULP1"
                     /coded_by="XM_041468072.1:284..1363"
                     /db_xref="GeneID:121353879"
ORIGIN      
        1 msvfqvkkek kskkkaatss deeddsdsst kpirsekkkn paslfqtggd ppkerkskkk
       61 avppkgaese eetpeaqqkn snkkgkakks kkqqkeerpp spvievdnle efvlqpapqg
      121 vtvkcrvtrd kkgmdrglyp tyylhldndk kvfllagrkr kksktsnyli sidptdlsrg
      181 genfigklrs nlmgtrftvf dnganpdran adwsnvrqel savvyetnvl gfkgprkmtv
      241 iipgmnadce rvpirprndn dgllmrwqnr nmdnvielhn kapvwndetq syvlnfhgrv
      301 thasvknfqi vhssdpdyiv mqfgrvadda ftmdynyplc avqafaials sfdgklace
//
LOCUS       XP_041324016             358 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324016
VERSION     XP_041324016.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468082.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="tubby-related protein 1 isoform X2"
                     /calculated_mol_wt=40276
     Region          113..353
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..358
                     /gene="TULP1"
                     /coded_by="XM_041468082.1:284..1360"
                     /db_xref="GeneID:121353879"
ORIGIN      
        1 msvfqvkkek kskkkaatss deeddsdsst kpirsekkkn paslfqtggd ppkerkskkk
       61 vppkgaesee etpeaqqkns nkkgkakksk kqqkeerpps pvievdnlee fvlqpapqgv
      121 tvkcrvtrdk kgmdrglypt yylhldndkk vfllagrkrk ksktsnylis idptdlsrgg
      181 enfigklrsn lmgtrftvfd nganpdrana dwsnvrqels avvyetnvlg fkgprkmtvi
      241 ipgmnadcer vpirprndnd gllmrwqnrn mdnvielhnk apvwndetqs yvlnfhgrvt
      301 hasvknfqiv hssdpdyivm qfgrvaddaf tmdynyplca vqafaialss fdgklace
//
LOCUS       XP_041324024             358 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324024
VERSION     XP_041324024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="tubby-related protein 1 isoform X3"
                     /calculated_mol_wt=40219
     Region          113..353
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..358
                     /gene="TULP1"
                     /coded_by="XM_041468090.1:284..1360"
                     /db_xref="GeneID:121353879"
ORIGIN      
        1 msvfqvkkek kskkkaatss deeddsdsst kpirsekkkn paslfqtggd ppkerkskkk
       61 avppkgaese eetpeaqqkn snkkgkakks kkqkeerpps pvievdnlee fvlqpapqgv
      121 tvkcrvtrdk kgmdrglypt yylhldndkk vfllagrkrk ksktsnylis idptdlsrgg
      181 enfigklrsn lmgtrftvfd nganpdrana dwsnvrqels avvyetnvlg fkgprkmtvi
      241 ipgmnadcer vpirprndnd gllmrwqnrn mdnvielhnk apvwndetqs yvlnfhgrvt
      301 hasvknfqiv hssdpdyivm qfgrvaddaf tmdynyplca vqafaialss fdgklace
//
LOCUS       XP_041324034             357 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324034
VERSION     XP_041324034.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468100.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="tubby-related protein 1 isoform X4"
                     /calculated_mol_wt=40148
     Region          112..352
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..357
                     /gene="TULP1"
                     /coded_by="XM_041468100.1:284..1357"
                     /db_xref="GeneID:121353879"
ORIGIN      
        1 msvfqvkkek kskkkaatss deeddsdsst kpirsekkkn paslfqtggd ppkerkskkk
       61 vppkgaesee etpeaqqkns nkkgkakksk kqkeerppsp vievdnleef vlqpapqgvt
      121 vkcrvtrdkk gmdrglypty ylhldndkkv fllagrkrkk sktsnylisi dptdlsrgge
      181 nfigklrsnl mgtrftvfdn ganpdranad wsnvrqelsa vvyetnvlgf kgprkmtvii
      241 pgmnadcerv pirprndndg llmrwqnrnm dnvielhnka pvwndetqsy vlnfhgrvth
      301 asvknfqivh ssdpdyivmq fgrvaddaft mdynyplcav qafaialssf dgklace
//
LOCUS       XP_041324047             385 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Wnt-2b [Pyrgilauda ruficollis].
ACCESSION   XP_041324047
VERSION     XP_041324047.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468113.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..385
                     /product="protein Wnt-2b"
                     /calculated_mol_wt=42841
     Region          61..374
                     /region_name="Wnt_Wnt2b"
                     /note="Wnt domain found in protein Wnt-2b and similar
                     proteins; cd19346"
                     /db_xref="CDD:381720"
     Site            order(232..233,236..238,246,353,355,357,359)
                     /site_type="other"
                     /note="Frizzled receptor binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381720"
     CDS             1..385
                     /gene="WNT2B"
                     /coded_by="XM_041468113.1:386..1543"
                     /db_xref="GeneID:121353897"
ORIGIN      
        1 mlspnrleas pgiavapgra ecgafprtag aaprlclplv llllaltpra dsswwyigal
       61 garvicdnip glvnkqrqlc qrypdimqsv gegakewire cqhqfrhhrw ncstldrdht
      121 vfgrvmlrss reaafvyais sagvvyaitr acsqgdlkvc scdplkrgrs kdergefdwg
      181 gcsdninygi rfakafvdak ekkvkdaral mnlhnnrcgr mavkrflkle ckchgvsgsc
      241 tlrtcwlams dfrktgdylr kkyngaiqvt mnqdgtgftv anknfrkptk tdlvyfensp
      301 dycvmdksag slgtagrvcs kasrgtdgce vmccgrgydt trvtrvtkce ckfhwccavr
      361 ckecedtvdv htckapkrae wldqt
//
LOCUS       XP_041324058             653 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium voltage-gated channel subfamily D member 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324058
VERSION     XP_041324058.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468124.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..653
                     /product="potassium voltage-gated channel subfamily D
                     member 3 isoform X1"
                     /calculated_mol_wt=72939
     Region          6..143
                     /region_name="BTB_POZ_KCND3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily D member 3 (KCND3);
                     cd18419"
                     /db_xref="CDD:349726"
     Site            order(7..19,21..22,26..27,29,31,34,36..37,39,54)
                     /site_type="other"
                     /note="beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:349726"
     Site            order(41,45,47..54,57,83,85..87,89,92,96,99..100,102,104,
                     107..110,112..113,116,131..132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349726"
     Region          187..413
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          471..565
                     /region_name="DUF3399"
                     /note="Domain of unknown function (DUF3399); pfam11879"
                     /db_xref="CDD:463381"
     CDS             1..653
                     /gene="KCND3"
                     /coded_by="XM_041468124.1:1..1962"
                     /db_xref="GeneID:121353905"
ORIGIN      
        1 maagvaawlp faraaaigwm pvancpmpla pteknkrqde liilnvsgrr fqtwrttler
       61 ypdtllgste kefffnedtk eyffdrdpev frcilnfyrt gklhypryec isaydeelaf
      121 ygilpeiigd ccyeeykdrk renaerlmdd ndsennqegs mpslsfrqtm wrafenphts
      181 tlalvfyyvt gffiavsvit nvvetvpcgt vpgnkelpcg eryavaffcl dtacvmiftv
      241 eyllrlfaap sryrfirsvm siidvvaimp yyiglvmtnn edvsgafvtl rvfrvfrifk
      301 fsrhsqglri lgytlkscas elgfllfslt maiiifatvm fyaekgssas kftsipasfw
      361 ytivtmttlg ygdmvpktia gkifgsicsl sgvlvialpv pvivsnfsri yhqnqradkr
      421 raqkkarlar irvaktgssn aylhskrngl lnealelpgs teeeqhmtkg tsliesqhhh
      481 llhclekttg lsylvddpll svrtstiknh efideqlfeq ncmessmqny pssrspslss
      541 qaglgssccs rrhkksahlp ncsvpatrlr smqelstihi qcseqpsltt srsslnmkad
      601 dglrpnckga qittaiisip tppaltpege sragpgspgp atnvpnvvkv sal
//
LOCUS       XP_041324067             652 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium voltage-gated channel subfamily D member 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324067
VERSION     XP_041324067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..652
                     /product="potassium voltage-gated channel subfamily D
                     member 3 isoform X2"
                     /calculated_mol_wt=72939
     Region          6..143
                     /region_name="BTB_POZ_KCND3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily D member 3 (KCND3);
                     cd18419"
                     /db_xref="CDD:349726"
     Site            order(7..19,21..22,26..27,29,31,34,36..37,39,54)
                     /site_type="other"
                     /note="beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:349726"
     Site            order(41,45,47..54,57,83,85..87,89,92,96,99..100,102,104,
                     107..110,112..113,116,131..132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349726"
     Region          187..413
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          471..565
                     /region_name="DUF3399"
                     /note="Domain of unknown function (DUF3399); pfam11879"
                     /db_xref="CDD:463381"
     CDS             1..652
                     /gene="KCND3"
                     /coded_by="XM_041468133.1:1..1959"
                     /db_xref="GeneID:121353905"
ORIGIN      
        1 maagvaawlp faraaaigwm pvancpmpla pteknkrqde liilnvsgrr fqtwrttler
       61 ypdtllgste kefffnedtk eyffdrdpev frcilnfyrt gklhypryec isaydeelaf
      121 ygilpeiigd ccyeeykdrk renaerlmdd ndsennqegs mpslsfrqtm wrafenphts
      181 tlalvfyyvt gffiavsvit nvvetvpcgt vpgnkelpcg eryavaffcl dtacvmiftv
      241 eyllrlfaap sryrfirsvm siidvvaimp yyiglvmtnn edvsgafvtl rvfrvfrifk
      301 fsrhsqglri lgytlkscas elgfllfslt maiiifatvm fyaekgssas kftsipasfw
      361 ytivtmttlg ygdmvpktia gkifgsicsl sgvlvialpv pvivsnfsri yhqnqradkr
      421 raqkkarlar irvaktgssn aylhskrngl lnealelpgs teeeqhmtkg tsliesqhhh
      481 llhclekttg lsylvddpll svrtstiknh efideqlfeq ncmessmqny pssrspslss
      541 qaglgssccs rrhkksahlp ncsvpatrlr smqelstihi qcseqpsltt srsslnmkad
      601 dglrpnckga qittaiisip tppaltpege sragpgspgp atnvpnvvke ki
//
LOCUS       XP_041324076             634 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium voltage-gated channel subfamily D member 3 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324076
VERSION     XP_041324076.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468142.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..634
                     /product="potassium voltage-gated channel subfamily D
                     member 3 isoform X3"
                     /calculated_mol_wt=70880
     Region          6..143
                     /region_name="BTB_POZ_KCND3"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily D member 3 (KCND3);
                     cd18419"
                     /db_xref="CDD:349726"
     Site            order(7..19,21..22,26..27,29,31,34,36..37,39,54)
                     /site_type="other"
                     /note="beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:349726"
     Site            order(41,45,47..54,57,83,85..87,89,92,96,99..100,102,104,
                     107..110,112..113,116,131..132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349726"
     Region          187..413
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          471..546
                     /region_name="DUF3399"
                     /note="Domain of unknown function (DUF3399); pfam11879"
                     /db_xref="CDD:463381"
     CDS             1..634
                     /gene="KCND3"
                     /coded_by="XM_041468142.1:1..1905"
                     /db_xref="GeneID:121353905"
ORIGIN      
        1 maagvaawlp faraaaigwm pvancpmpla pteknkrqde liilnvsgrr fqtwrttler
       61 ypdtllgste kefffnedtk eyffdrdpev frcilnfyrt gklhypryec isaydeelaf
      121 ygilpeiigd ccyeeykdrk renaerlmdd ndsennqegs mpslsfrqtm wrafenphts
      181 tlalvfyyvt gffiavsvit nvvetvpcgt vpgnkelpcg eryavaffcl dtacvmiftv
      241 eyllrlfaap sryrfirsvm siidvvaimp yyiglvmtnn edvsgafvtl rvfrvfrifk
      301 fsrhsqglri lgytlkscas elgfllfslt maiiifatvm fyaekgssas kftsipasfw
      361 ytivtmttlg ygdmvpktia gkifgsicsl sgvlvialpv pvivsnfsri yhqnqradkr
      421 raqkkarlar irvaktgssn aylhskrngl lnealelpgs teeeqhmtkg tsliesqhhh
      481 llhclekttn hefideqlfe qncmessmqn ypssrspsls sqaglgsscc srrhkksahl
      541 pncsvpatrl rsmqelstih iqcseqpslt tsrsslnmka ddglrpnckg aqittaiisi
      601 ptppaltpeg esragpgspg patnvpnvvk vsal
//
LOCUS       XP_041324088             624 aa            linear   VRT 06-MAY-2021
DEFINITION  differentially expressed in FDCP 6 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324088
VERSION     XP_041324088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="differentially expressed in FDCP 6 homolog"
                     /calculated_mol_wt=73143
     Region          207..315
                     /region_name="PH_SWAP-70"
                     /note="Switch-associated protein-70 Pleckstrin homology
                     (PH) domain; cd13273"
                     /db_xref="CDD:270092"
     Region          <293..>533
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..624
                     /gene="DEF6"
                     /coded_by="XM_041468154.1:123..1997"
                     /db_xref="GeneID:121353923"
ORIGIN      
        1 mdlraellks iwyaftaldv eksgkvsksq lkvlshnlyt vlciphdpva leehfrdddd
       61 gpvssqgymp ylnkyildkv eegafvkenf delcwtltak knykpdrngn svvshqdafk
      121 lwclfnflse dkyplvmvpd eveyllkkic tamnvelnsc elddylsqep qgqggltvwq
      181 fldmvnsgrf lrgieqeais maveevyqev iedvlkqgyl wkkgqlrrnw serwfmlkps
      241 vlsyymseer kekkgsipld khccvevlpd rdgkrcmfcv ktvsrtyems asdtrqrqew
      301 tlaiqtairl qaegkkslhk dlkqkrreqr eqreqrkaak eeetqrlkql qeekerklqe
      361 lellkeaqrq aeillqeeeq rrrqqheemq rtleiqlrea eqarasmqae mvlkeaeaer
      421 qrkrileled mqerlqealq qevkarqdee avryaqarll aeeeeklkel mklkeeqeey
      481 iirtqrekqv lkqemenknk cleeaqkqle evrvnrqrvd qdvmaaqrkl rqastnvkhw
      541 nvqmnrlmhp igpgdkrtnv sggvfagyqp llsrrdsslk lkqrvedkgn dptrensken
      601 vsnggnssts pspdadtmat epnn
//
LOCUS       XP_041324097            1166 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit beta-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324097
VERSION     XP_041324097.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468163.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1166
                     /product="laminin subunit beta-3"
                     /calculated_mol_wt=124572
     Region          33..251
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); pfam00055"
                     /db_xref="CDD:459653"
     Region          252..301
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(253,255,269,276,278,287)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          312..365
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(313,315,322,340,343,352)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          376..425
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(376,378,389,396,398,407)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          428..476
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(428,430,442,449,451,460)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          479..532
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(479,481,491,498,500,509)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          532..>569
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(532,534,544,551,553,562)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          831..1043
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1096..1166
                     /region_name="cc_LAMB_C"
                     /note="C-terminal coiled-coil domain found in the laminin
                     subunit beta (LAMB) family; cl40438"
                     /db_xref="CDD:424069"
     Site            order(1098..1099,1102..1103,1105..1106,1109,1116..1117,
                     1119..1120,1123,1126..1127,1130..1131,1133..1135,
                     1137..1138,1141,1144..1145,1147..1149,1151..1152,
                     1154..1156,1158..1160,1162..1165)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:411969"
     CDS             1..1166
                     /gene="LAMB3"
                     /coded_by="XM_041468163.1:186..3686"
                     /db_xref="GeneID:121353934"
ORIGIN      
        1 meprcqpwpw avlvllaapg llaaqracsq gacypapgdl llgraphlra sstcglskpe
       61 tyctphgqws mkccrcdsrl phsssghrve nvlssagrar wwqsqngver vslqldleqm
      121 fqldsvvlhf rsppaamlie rsldagrtwq vlqylasdca tafprvprgs pegwqdprcq
      181 elrghpvhgg tvkfsvqdlg stisssysqa igrlgpftnl rinftelphi prqgyhspst
      241 fyavtelqvl gscfchghae rcgpegdqhs tvpghcvcqh ntagphcerc aalfnarpwa
      301 paedsdphac qrcdcnghss schfdpelyq asggasggvc dscqhntegn ncercktgyf
      361 rnprrelshp eaclpcecdp dgtvpgsvcd pgtgrcvckd nvqgdrchlc kpgfaqlaga
      421 npagcrrctc nalgtrqdtv pcdgdtgscf clpnvvgsdc gqcaaghwgl gsgqgcqpca
      481 chprgsrsph cnqftgqcpc rdgftgqtcs avgqqqcppr hyrdarggct ecdcdfqgte
      541 eagcepatgr clcragaagp rcercqrghc ssqpgcqpch pcfhaydgdi erlrqrqagl
      601 anatarlpag tggsqlgprl araqgnlqqa lgilghpagt qqglaqagsa laaireqvrg
      661 inpnlrlldd taslsrelea lnsslfvtss qyqskktqfe ssrstdlsga fqtilsayrs
      721 sgrasslaeg apgllaqare srrsavglqg tlagdtakll alkgelasap dltpvinqvc
      781 ggarvepctp arcqgllcpr dnssvcgagr pchglfplas galaaagraa kefsslsarl
      841 rdtaqliqtt elsasqiqss trrlaeqlgq srtqlqgdvr rarqllqrlr afladkdtdp
      901 asiqeisesv lslrlptdaa avrrrmteiq klatelqcpe dilaqtaedi arakrlqqea
      961 eqarnranav egsveevlgs lqrantvlle aqgalrgsgs slrfiqerve eieavlgpae
     1021 knvvamgagl aglagrlsql qhsteqnrlr agdtqdtagt aaqqasraqq alaqvkelys
     1081 elqsrlgqgp algeqgrrvq sigqeaqalf qetvgimlrm etleseiqeg nkalvsrmsr
     1141 lsgleekvgk irdnikrkva yyescs
//
LOCUS       XP_041324105            1240 aa            linear   VRT 06-MAY-2021
DEFINITION  F-actin-monooxygenase MICAL1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324105
VERSION     XP_041324105.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468171.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1240
                     /product="F-actin-monooxygenase MICAL1 isoform X1"
                     /calculated_mol_wt=137030
     Region          86..>220
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     Region          509..611
                     /region_name="CH_MICAL_EHBP-like"
                     /note="calponin homology (CH) domain found in the MICAL
                     and EHBP families; cd22198"
                     /db_xref="CDD:409188"
     Site            order(512,562,564..565,568..569,571,581..588,596,598..599,
                     601..602,605..606,609)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409188"
     Region          818..872
                     /region_name="LIM_Mical"
                     /note="The LIM domain of Mical (molecule interacting with
                     CasL); cd09439"
                     /db_xref="CDD:188823"
     Site            order(818,821,839,842,845,848,868,871)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188823"
     Region          <873..1019
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1113..1238
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1240
                     /gene="MICAL1"
                     /coded_by="XM_041468171.1:633..4355"
                     /db_xref="GeneID:121353947"
ORIGIN      
        1 msvpadepgn pahaiferfl ragecrevlg cflelcqqlg lqgsglqlyh glkaalnywn
       61 akalwskldk kaghkdydqg tacagtkclv vgagpcglra aielallgar vvllekrdsf
      121 srnnvlhlwp ftihdlralg akkfygrfct gtldhisirq lqlillkval llgvevhtnv
      181 rfeglvppag kaggwqavlq psssplthye fdvlisaggg kfvpegfkrk etrgklaigi
      241 ttnfinrhsr aevevaeisg variynqkff qnlynktgid lenivyykdd thyfvmtakk
      301 qsllkkgvil qdkadiesll apdnvnrdal lsyakeaanf stnyclpele falnhrdlpd
      361 vdmfdftcmt rsenaalvre hngsrvllgl vgdclvepfw plgtgvargf laafdaawmv
      421 rrwaagtppl evlaeresiy qrlsqtspdn tnknvsqysi dpatrypnin lqaikasqvk
      481 dlylvgmvev dhkrksdnrl stvapgavce ellswcqast agypgvavtn fstswtsgla
      541 lcalihrfrp dlldfdsvdp qdaiqthqmv ldvaeqelgi qpvlssaema tltepdrldl
      601 itylshfyqi fgaspevevs kkplsppgtr gailflsklq ksrnlahkrt qdgaqkdsea
      661 krsrrdaeld tgldgdtpds ahelpqatvm dpgqvgpcvt lgwsvqlrag gapgghqwla
      721 gpsqglgpel hkrtptgsql lpacfltqlv frsqdchslt hperpdpalr egqsparapm
      781 aagtatgqgg cqspaatpac plppqpprdr tgensdacyf cgrrvyiver asaegrffhr
      841 gcfqcrrcga tlrlgdyafd eedgnfycsl hypnpasmdl prdeasalpd gdadaaahpp
      901 sdagrssvsp mewapsppqp tpaasqagee pgdiedtadt gdmeeqella qpggdvreee
      961 vpraepqgta eegeesggrr kivltplekl slstlnltse aepeppvkpa rlrlpaapea
     1021 lpalrqgqga weeeeeeeki dmekdledsd seegeeeeeg keeeqdtglg ivkelypdpr
     1081 eeekfptwkr tlarraresq mkrfckaqai qrrleeievt freleqqgik lekllrdene
     1141 sladqqtqwt nqllylvqkk nnlmseesdl miavqelkle eqqcqldekl rsymnkedal
     1201 ktpedekaeq dilkqlvevv nkrnvliqlq eekrlselra
//
LOCUS       XP_041324114            1240 aa            linear   VRT 06-MAY-2021
DEFINITION  F-actin-monooxygenase MICAL1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324114
VERSION     XP_041324114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1240
                     /product="F-actin-monooxygenase MICAL1 isoform X1"
                     /calculated_mol_wt=137030
     Region          86..>220
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     Region          509..611
                     /region_name="CH_MICAL_EHBP-like"
                     /note="calponin homology (CH) domain found in the MICAL
                     and EHBP families; cd22198"
                     /db_xref="CDD:409188"
     Site            order(512,562,564..565,568..569,571,581..588,596,598..599,
                     601..602,605..606,609)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409188"
     Region          818..872
                     /region_name="LIM_Mical"
                     /note="The LIM domain of Mical (molecule interacting with
                     CasL); cd09439"
                     /db_xref="CDD:188823"
     Site            order(818,821,839,842,845,848,868,871)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188823"
     Region          <873..1019
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1113..1238
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1240
                     /gene="MICAL1"
                     /coded_by="XM_041468180.1:372..4094"
                     /db_xref="GeneID:121353947"
ORIGIN      
        1 msvpadepgn pahaiferfl ragecrevlg cflelcqqlg lqgsglqlyh glkaalnywn
       61 akalwskldk kaghkdydqg tacagtkclv vgagpcglra aielallgar vvllekrdsf
      121 srnnvlhlwp ftihdlralg akkfygrfct gtldhisirq lqlillkval llgvevhtnv
      181 rfeglvppag kaggwqavlq psssplthye fdvlisaggg kfvpegfkrk etrgklaigi
      241 ttnfinrhsr aevevaeisg variynqkff qnlynktgid lenivyykdd thyfvmtakk
      301 qsllkkgvil qdkadiesll apdnvnrdal lsyakeaanf stnyclpele falnhrdlpd
      361 vdmfdftcmt rsenaalvre hngsrvllgl vgdclvepfw plgtgvargf laafdaawmv
      421 rrwaagtppl evlaeresiy qrlsqtspdn tnknvsqysi dpatrypnin lqaikasqvk
      481 dlylvgmvev dhkrksdnrl stvapgavce ellswcqast agypgvavtn fstswtsgla
      541 lcalihrfrp dlldfdsvdp qdaiqthqmv ldvaeqelgi qpvlssaema tltepdrldl
      601 itylshfyqi fgaspevevs kkplsppgtr gailflsklq ksrnlahkrt qdgaqkdsea
      661 krsrrdaeld tgldgdtpds ahelpqatvm dpgqvgpcvt lgwsvqlrag gapgghqwla
      721 gpsqglgpel hkrtptgsql lpacfltqlv frsqdchslt hperpdpalr egqsparapm
      781 aagtatgqgg cqspaatpac plppqpprdr tgensdacyf cgrrvyiver asaegrffhr
      841 gcfqcrrcga tlrlgdyafd eedgnfycsl hypnpasmdl prdeasalpd gdadaaahpp
      901 sdagrssvsp mewapsppqp tpaasqagee pgdiedtadt gdmeeqella qpggdvreee
      961 vpraepqgta eegeesggrr kivltplekl slstlnltse aepeppvkpa rlrlpaapea
     1021 lpalrqgqga weeeeeeeki dmekdledsd seegeeeeeg keeeqdtglg ivkelypdpr
     1081 eeekfptwkr tlarraresq mkrfckaqai qrrleeievt freleqqgik lekllrdene
     1141 sladqqtqwt nqllylvqkk nnlmseesdl miavqelkle eqqcqldekl rsymnkedal
     1201 ktpedekaeq dilkqlvevv nkrnvliqlq eekrlselra
//
LOCUS       XP_041324124            1240 aa            linear   VRT 06-MAY-2021
DEFINITION  F-actin-monooxygenase MICAL1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324124
VERSION     XP_041324124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1240
                     /product="F-actin-monooxygenase MICAL1 isoform X1"
                     /calculated_mol_wt=137030
     Region          86..>220
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     Region          509..611
                     /region_name="CH_MICAL_EHBP-like"
                     /note="calponin homology (CH) domain found in the MICAL
                     and EHBP families; cd22198"
                     /db_xref="CDD:409188"
     Site            order(512,562,564..565,568..569,571,581..588,596,598..599,
                     601..602,605..606,609)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409188"
     Region          818..872
                     /region_name="LIM_Mical"
                     /note="The LIM domain of Mical (molecule interacting with
                     CasL); cd09439"
                     /db_xref="CDD:188823"
     Site            order(818,821,839,842,845,848,868,871)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188823"
     Region          <873..1019
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1113..1238
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1240
                     /gene="MICAL1"
                     /coded_by="XM_041468190.1:638..4360"
                     /db_xref="GeneID:121353947"
ORIGIN      
        1 msvpadepgn pahaiferfl ragecrevlg cflelcqqlg lqgsglqlyh glkaalnywn
       61 akalwskldk kaghkdydqg tacagtkclv vgagpcglra aielallgar vvllekrdsf
      121 srnnvlhlwp ftihdlralg akkfygrfct gtldhisirq lqlillkval llgvevhtnv
      181 rfeglvppag kaggwqavlq psssplthye fdvlisaggg kfvpegfkrk etrgklaigi
      241 ttnfinrhsr aevevaeisg variynqkff qnlynktgid lenivyykdd thyfvmtakk
      301 qsllkkgvil qdkadiesll apdnvnrdal lsyakeaanf stnyclpele falnhrdlpd
      361 vdmfdftcmt rsenaalvre hngsrvllgl vgdclvepfw plgtgvargf laafdaawmv
      421 rrwaagtppl evlaeresiy qrlsqtspdn tnknvsqysi dpatrypnin lqaikasqvk
      481 dlylvgmvev dhkrksdnrl stvapgavce ellswcqast agypgvavtn fstswtsgla
      541 lcalihrfrp dlldfdsvdp qdaiqthqmv ldvaeqelgi qpvlssaema tltepdrldl
      601 itylshfyqi fgaspevevs kkplsppgtr gailflsklq ksrnlahkrt qdgaqkdsea
      661 krsrrdaeld tgldgdtpds ahelpqatvm dpgqvgpcvt lgwsvqlrag gapgghqwla
      721 gpsqglgpel hkrtptgsql lpacfltqlv frsqdchslt hperpdpalr egqsparapm
      781 aagtatgqgg cqspaatpac plppqpprdr tgensdacyf cgrrvyiver asaegrffhr
      841 gcfqcrrcga tlrlgdyafd eedgnfycsl hypnpasmdl prdeasalpd gdadaaahpp
      901 sdagrssvsp mewapsppqp tpaasqagee pgdiedtadt gdmeeqella qpggdvreee
      961 vpraepqgta eegeesggrr kivltplekl slstlnltse aepeppvkpa rlrlpaapea
     1021 lpalrqgqga weeeeeeeki dmekdledsd seegeeeeeg keeeqdtglg ivkelypdpr
     1081 eeekfptwkr tlarraresq mkrfckaqai qrrleeievt freleqqgik lekllrdene
     1141 sladqqtqwt nqllylvqkk nnlmseesdl miavqelkle eqqcqldekl rsymnkedal
     1201 ktpedekaeq dilkqlvevv nkrnvliqlq eekrlselra
//
LOCUS       XP_041324134            1129 aa            linear   VRT 06-MAY-2021
DEFINITION  F-actin-monooxygenase MICAL1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324134
VERSION     XP_041324134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468200.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1129
                     /product="F-actin-monooxygenase MICAL1 isoform X2"
                     /calculated_mol_wt=125697
     Region          86..>220
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     Region          509..611
                     /region_name="CH_MICAL_EHBP-like"
                     /note="calponin homology (CH) domain found in the MICAL
                     and EHBP families; cd22198"
                     /db_xref="CDD:409188"
     Site            order(512,562,564..565,568..569,571,581..588,596,598..599,
                     601..602,605..606,609)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409188"
     Region          707..761
                     /region_name="LIM_Mical"
                     /note="The LIM domain of Mical (molecule interacting with
                     CasL); cd09439"
                     /db_xref="CDD:188823"
     Site            order(707,710,728,731,734,737,757,760)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188823"
     Region          <762..908
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1002..1127
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1129
                     /gene="MICAL1"
                     /coded_by="XM_041468200.1:632..4021"
                     /db_xref="GeneID:121353947"
ORIGIN      
        1 msvpadepgn pahaiferfl ragecrevlg cflelcqqlg lqgsglqlyh glkaalnywn
       61 akalwskldk kaghkdydqg tacagtkclv vgagpcglra aielallgar vvllekrdsf
      121 srnnvlhlwp ftihdlralg akkfygrfct gtldhisirq lqlillkval llgvevhtnv
      181 rfeglvppag kaggwqavlq psssplthye fdvlisaggg kfvpegfkrk etrgklaigi
      241 ttnfinrhsr aevevaeisg variynqkff qnlynktgid lenivyykdd thyfvmtakk
      301 qsllkkgvil qdkadiesll apdnvnrdal lsyakeaanf stnyclpele falnhrdlpd
      361 vdmfdftcmt rsenaalvre hngsrvllgl vgdclvepfw plgtgvargf laafdaawmv
      421 rrwaagtppl evlaeresiy qrlsqtspdn tnknvsqysi dpatrypnin lqaikasqvk
      481 dlylvgmvev dhkrksdnrl stvapgavce ellswcqast agypgvavtn fstswtsgla
      541 lcalihrfrp dlldfdsvdp qdaiqthqmv ldvaeqelgi qpvlssaema tltepdrldl
      601 itylshfyqi fgaspevevs kkplsppgtr gailflsklq ksrnlahkrt qdgaqkdsea
      661 krsrrdaeld tgldgdtpds ahelpqatvm dpgqpprdrt gensdacyfc grrvyivera
      721 saegrffhrg cfqcrrcgat lrlgdyafde edgnfycslh ypnpasmdlp rdeasalpdg
      781 dadaaahpps dagrssvspm ewapsppqpt paasqageep gdiedtadtg dmeeqellaq
      841 pggdvreeev praepqgtae egeesggrrk ivltplekls lstlnltsea epeppvkpar
      901 lrlpaapeal palrqgqgaw eeeeeeekid mekdledsds eegeeeeegk eeeqdtglgi
      961 vkelypdpre eekfptwkrt larraresqm krfckaqaiq rrleeievtf releqqgikl
     1021 ekllrdenes ladqqtqwtn qllylvqkkn nlmseesdlm iavqelklee qqcqldeklr
     1081 symnkedalk tpedekaeqd ilkqlvevvn krnvliqlqe ekrlselra
//
LOCUS       XP_041324143            1103 aa            linear   VRT 06-MAY-2021
DEFINITION  F-actin-monooxygenase MICAL1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324143
VERSION     XP_041324143.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468209.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1103
                     /product="F-actin-monooxygenase MICAL1 isoform X3"
                     /calculated_mol_wt=123034
     Region          86..>220
                     /region_name="UbiH"
                     /note="2-polyprenyl-6-methoxyphenol hydroxylase and
                     related FAD-dependent oxidoreductases [Coenzyme transport
                     and metabolism, Energy production and conversion];
                     COG0654"
                     /db_xref="CDD:440419"
     Region          509..611
                     /region_name="CH_MICAL_EHBP-like"
                     /note="calponin homology (CH) domain found in the MICAL
                     and EHBP families; cd22198"
                     /db_xref="CDD:409188"
     Site            order(512,562,564..565,568..569,571,581..588,596,598..599,
                     601..602,605..606,609)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409188"
     Region          681..735
                     /region_name="LIM_Mical"
                     /note="The LIM domain of Mical (molecule interacting with
                     CasL); cd09439"
                     /db_xref="CDD:188823"
     Site            order(681,684,702,705,708,711,731,734)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188823"
     Region          <736..882
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          976..1101
                     /region_name="bMERB_dom"
                     /note="Bivalent Mical/EHBP Rab binding domain; pfam12130"
                     /db_xref="CDD:463467"
     CDS             1..1103
                     /gene="MICAL1"
                     /coded_by="XM_041468209.1:632..3943"
                     /db_xref="GeneID:121353947"
ORIGIN      
        1 msvpadepgn pahaiferfl ragecrevlg cflelcqqlg lqgsglqlyh glkaalnywn
       61 akalwskldk kaghkdydqg tacagtkclv vgagpcglra aielallgar vvllekrdsf
      121 srnnvlhlwp ftihdlralg akkfygrfct gtldhisirq lqlillkval llgvevhtnv
      181 rfeglvppag kaggwqavlq psssplthye fdvlisaggg kfvpegfkrk etrgklaigi
      241 ttnfinrhsr aevevaeisg variynqkff qnlynktgid lenivyykdd thyfvmtakk
      301 qsllkkgvil qdkadiesll apdnvnrdal lsyakeaanf stnyclpele falnhrdlpd
      361 vdmfdftcmt rsenaalvre hngsrvllgl vgdclvepfw plgtgvargf laafdaawmv
      421 rrwaagtppl evlaeresiy qrlsqtspdn tnknvsqysi dpatrypnin lqaikasqvk
      481 dlylvgmvev dhkrksdnrl stvapgavce ellswcqast agypgvavtn fstswtsgla
      541 lcalihrfrp dlldfdsvdp qdaiqthqmv ldvaeqelgi qpvlssaema tltepdrldl
      601 itylshfyqi fgaspevevs kkplsppgtr gailflsklq ksrnlahkrt qdgaqkdsea
      661 krsrrdaepp rdrtgensda cyfcgrrvyi verasaegrf fhrgcfqcrr cgatlrlgdy
      721 afdeedgnfy cslhypnpas mdlprdeasa lpdgdadaaa hppsdagrss vspmewapsp
      781 pqptpaasqa geepgdiedt adtgdmeeqe llaqpggdvr eeevpraepq gtaeegeesg
      841 grrkivltpl eklslstlnl tseaepeppv kparlrlpaa pealpalrqg qgaweeeeee
      901 ekidmekdle dsdseegeee eegkeeeqdt glgivkelyp dpreeekfpt wkrtlarrar
      961 esqmkrfcka qaiqrrleei evtfreleqq giklekllrd enesladqqt qwtnqllylv
     1021 qkknnlmsee sdlmiavqel kleeqqcqld eklrsymnke dalktpedek aeqdilkqlv
     1081 evvnkrnvli qlqeekrlse lra
//
LOCUS       XP_041324155             432 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional enhancer factor TEF-5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324155
VERSION     XP_041324155.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468221.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="transcriptional enhancer factor TEF-5 isoform
                     X1"
                     /calculated_mol_wt=48684
     Region          8..75
                     /region_name="TEA"
                     /note="TEA domain; smart00426"
                     /db_xref="CDD:128703"
     Region          <146..216
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          221..429
                     /region_name="YBD"
                     /note="YAP binding domain; pfam17725"
                     /db_xref="CDD:435993"
     CDS             1..432
                     /gene="TEAD3"
                     /coded_by="XM_041468221.1:234..1532"
                     /db_xref="GeneID:121353969"
ORIGIN      
        1 mdksldndae gvwspdieqs fqealaiypp cgrrkiilsd egkmygrnel iaryiklrtg
       61 ktrtrkqvss hiqvlarkkv reyqvgikvs shlqvlarrk sreiqsklka mnldqvskdk
      121 alqsmasmss aqivsasvlq nklspppplp qavfsaaprf wsgpipgqpg psqdikpfaq
      181 paypiqppmp pslasyepla plppaasavp vwqdrtiast klrlleysaf mevprdaety
      241 skhlfvhigq tnpsysdpll eavdirqiyd kfpekkgglk elyergpqns fflvkfwadl
      301 nstiqdgpgt fygvssqyss aenmtitvst kvcsfgkqvv ekveteyarl engrfvyrih
      361 rspmceymin fihklkhlpe kymmnsvlen ftilqvvtnr dtqetllcia fvfevstseh
      421 gaqhhvyklv kd
//
LOCUS       XP_041324165             432 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional enhancer factor TEF-5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324165
VERSION     XP_041324165.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468231.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="transcriptional enhancer factor TEF-5 isoform
                     X1"
                     /calculated_mol_wt=48684
     Region          8..75
                     /region_name="TEA"
                     /note="TEA domain; smart00426"
                     /db_xref="CDD:128703"
     Region          <146..216
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          221..429
                     /region_name="YBD"
                     /note="YAP binding domain; pfam17725"
                     /db_xref="CDD:435993"
     CDS             1..432
                     /gene="TEAD3"
                     /coded_by="XM_041468231.1:177..1475"
                     /db_xref="GeneID:121353969"
ORIGIN      
        1 mdksldndae gvwspdieqs fqealaiypp cgrrkiilsd egkmygrnel iaryiklrtg
       61 ktrtrkqvss hiqvlarkkv reyqvgikvs shlqvlarrk sreiqsklka mnldqvskdk
      121 alqsmasmss aqivsasvlq nklspppplp qavfsaaprf wsgpipgqpg psqdikpfaq
      181 paypiqppmp pslasyepla plppaasavp vwqdrtiast klrlleysaf mevprdaety
      241 skhlfvhigq tnpsysdpll eavdirqiyd kfpekkgglk elyergpqns fflvkfwadl
      301 nstiqdgpgt fygvssqyss aenmtitvst kvcsfgkqvv ekveteyarl engrfvyrih
      361 rspmceymin fihklkhlpe kymmnsvlen ftilqvvtnr dtqetllcia fvfevstseh
      421 gaqhhvyklv kd
//
LOCUS       XP_041324173             411 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional enhancer factor TEF-5 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324173
VERSION     XP_041324173.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468239.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="transcriptional enhancer factor TEF-5 isoform
                     X2"
                     /calculated_mol_wt=46263
     Region          8..75
                     /region_name="TEA"
                     /note="TEA domain; smart00426"
                     /db_xref="CDD:128703"
     Region          <125..195
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          200..408
                     /region_name="YBD"
                     /note="YAP binding domain; pfam17725"
                     /db_xref="CDD:435993"
     CDS             1..411
                     /gene="TEAD3"
                     /coded_by="XM_041468239.1:232..1467"
                     /db_xref="GeneID:121353969"
ORIGIN      
        1 mdksldndae gvwspdieqs fqealaiypp cgrrkiilsd egkmygrnel iaryiklrtg
       61 ktrtrkqvss hlqvlarrks reiqsklkam nldqvskdka lqsmasmssa qivsasvlqn
      121 klspppplpq avfsaaprfw sgpipgqpgp sqdikpfaqp aypiqppmpp slasyeplap
      181 lppaasavpv wqdrtiastk lrlleysafm evprdaetys khlfvhigqt npsysdplle
      241 avdirqiydk fpekkgglke lyergpqnsf flvkfwadln stiqdgpgtf ygvssqyssa
      301 enmtitvstk vcsfgkqvve kveteyarle ngrfvyrihr spmceyminf ihklkhlpek
      361 ymmnsvlenf tilqvvtnrd tqetllciaf vfevstsehg aqhhvyklvk d
//
LOCUS       XP_041324181             411 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional enhancer factor TEF-5 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324181
VERSION     XP_041324181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468247.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="transcriptional enhancer factor TEF-5 isoform
                     X3"
                     /calculated_mol_wt=46238
     Region          8..75
                     /region_name="TEA"
                     /note="TEA domain; smart00426"
                     /db_xref="CDD:128703"
     Region          <125..195
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          200..408
                     /region_name="YBD"
                     /note="YAP binding domain; pfam17725"
                     /db_xref="CDD:435993"
     CDS             1..411
                     /gene="TEAD3"
                     /coded_by="XM_041468247.1:235..1470"
                     /db_xref="GeneID:121353969"
ORIGIN      
        1 mdksldndae gvwspdieqs fqealaiypp cgrrkiilsd egkmygrnel iaryiklrtg
       61 ktrtrkqvss hiqvlarkkv reyqvgikam nldqvskdka lqsmasmssa qivsasvlqn
      121 klspppplpq avfsaaprfw sgpipgqpgp sqdikpfaqp aypiqppmpp slasyeplap
      181 lppaasavpv wqdrtiastk lrlleysafm evprdaetys khlfvhigqt npsysdplle
      241 avdirqiydk fpekkgglke lyergpqnsf flvkfwadln stiqdgpgtf ygvssqyssa
      301 enmtitvstk vcsfgkqvve kveteyarle ngrfvyrihr spmceyminf ihklkhlpek
      361 ymmnsvlenf tilqvvtnrd tqetllciaf vfevstsehg aqhhvyklvk d
//
LOCUS       XP_041324189             432 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional enhancer factor TEF-5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324189
VERSION     XP_041324189.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468255.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="transcriptional enhancer factor TEF-5 isoform
                     X1"
                     /calculated_mol_wt=48684
     Region          8..75
                     /region_name="TEA"
                     /note="TEA domain; smart00426"
                     /db_xref="CDD:128703"
     Region          <146..216
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          221..429
                     /region_name="YBD"
                     /note="YAP binding domain; pfam17725"
                     /db_xref="CDD:435993"
     CDS             1..432
                     /gene="TEAD3"
                     /coded_by="XM_041468255.1:198..1496"
                     /db_xref="GeneID:121353969"
ORIGIN      
        1 mdksldndae gvwspdieqs fqealaiypp cgrrkiilsd egkmygrnel iaryiklrtg
       61 ktrtrkqvss hiqvlarkkv reyqvgikvs shlqvlarrk sreiqsklka mnldqvskdk
      121 alqsmasmss aqivsasvlq nklspppplp qavfsaaprf wsgpipgqpg psqdikpfaq
      181 paypiqppmp pslasyepla plppaasavp vwqdrtiast klrlleysaf mevprdaety
      241 skhlfvhigq tnpsysdpll eavdirqiyd kfpekkgglk elyergpqns fflvkfwadl
      301 nstiqdgpgt fygvssqyss aenmtitvst kvcsfgkqvv ekveteyarl engrfvyrih
      361 rspmceymin fihklkhlpe kymmnsvlen ftilqvvtnr dtqetllcia fvfevstseh
      421 gaqhhvyklv kd
//
LOCUS       XP_041324200             411 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional enhancer factor TEF-5 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324200
VERSION     XP_041324200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="transcriptional enhancer factor TEF-5 isoform
                     X3"
                     /calculated_mol_wt=46238
     Region          8..75
                     /region_name="TEA"
                     /note="TEA domain; smart00426"
                     /db_xref="CDD:128703"
     Region          <125..195
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          200..408
                     /region_name="YBD"
                     /note="YAP binding domain; pfam17725"
                     /db_xref="CDD:435993"
     CDS             1..411
                     /gene="TEAD3"
                     /coded_by="XM_041468266.1:200..1435"
                     /db_xref="GeneID:121353969"
ORIGIN      
        1 mdksldndae gvwspdieqs fqealaiypp cgrrkiilsd egkmygrnel iaryiklrtg
       61 ktrtrkqvss hiqvlarkkv reyqvgikam nldqvskdka lqsmasmssa qivsasvlqn
      121 klspppplpq avfsaaprfw sgpipgqpgp sqdikpfaqp aypiqppmpp slasyeplap
      181 lppaasavpv wqdrtiastk lrlleysafm evprdaetys khlfvhigqt npsysdplle
      241 avdirqiydk fpekkgglke lyergpqnsf flvkfwadln stiqdgpgtf ygvssqyssa
      301 enmtitvstk vcsfgkqvve kveteyarle ngrfvyrihr spmceyminf ihklkhlpek
      361 ymmnsvlenf tilqvvtnrd tqetllciaf vfevstsehg aqhhvyklvk d
//
LOCUS       XP_041324212             409 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin phosphodiesterase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324212
VERSION     XP_041324212.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468278.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="sphingomyelin phosphodiesterase 2"
                     /calculated_mol_wt=45524
     Region          14..279
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(15,49,136,178,180,238,271..272)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(49,271)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(136,180,272)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..409
                     /gene="SMPD2"
                     /coded_by="XM_041468278.1:738..1967"
                     /db_xref="GeneID:121353998"
ORIGIN      
        1 megeptlrlr ifnlncwair ylskrrqqrv rligdtlrqe gfdlvllqev wseqdysdlk
       61 vklagcypfs hyfrsgvigs glcvfsrfpi ldtllyqysl ngypymlqhg dwfcgksvgl
      121 vimkisgiif nvyvthlhae ycrdkdaylp hrlvqawela qfirhtskaa dvvllggdln
      181 mhpedvgirl lrgwtglqda faeamhfegc kngctlvpdn cftdkaellp fplgiridyi
      241 lykaissftv kceelktttg rapgvdipfs dheavmatlh iqrqgqpaga tlgtadlala
      301 dvvteartev gvglqaarrq ryssgrmavl allllllqaa aalatlaglg tdqpfpklsf
      361 cllaflalgv lvlatglhlf htmevkmlhg tedqmwmvlr alqerpseg
//
LOCUS       XP_041324220             409 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin phosphodiesterase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324220
VERSION     XP_041324220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="sphingomyelin phosphodiesterase 2"
                     /calculated_mol_wt=45524
     Region          14..279
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(15,49,136,178,180,238,271..272)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(49,271)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(136,180,272)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..409
                     /gene="SMPD2"
                     /coded_by="XM_041468286.1:459..1688"
                     /db_xref="GeneID:121353998"
ORIGIN      
        1 megeptlrlr ifnlncwair ylskrrqqrv rligdtlrqe gfdlvllqev wseqdysdlk
       61 vklagcypfs hyfrsgvigs glcvfsrfpi ldtllyqysl ngypymlqhg dwfcgksvgl
      121 vimkisgiif nvyvthlhae ycrdkdaylp hrlvqawela qfirhtskaa dvvllggdln
      181 mhpedvgirl lrgwtglqda faeamhfegc kngctlvpdn cftdkaellp fplgiridyi
      241 lykaissftv kceelktttg rapgvdipfs dheavmatlh iqrqgqpaga tlgtadlala
      301 dvvteartev gvglqaarrq ryssgrmavl allllllqaa aalatlaglg tdqpfpklsf
      361 cllaflalgv lvlatglhlf htmevkmlhg tedqmwmvlr alqerpseg
//
LOCUS       XP_041324228             409 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin phosphodiesterase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324228
VERSION     XP_041324228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="sphingomyelin phosphodiesterase 2"
                     /calculated_mol_wt=45524
     Region          14..279
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(15,49,136,178,180,238,271..272)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(49,271)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(136,180,272)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..409
                     /gene="SMPD2"
                     /coded_by="XM_041468294.1:112..1341"
                     /db_xref="GeneID:121353998"
ORIGIN      
        1 megeptlrlr ifnlncwair ylskrrqqrv rligdtlrqe gfdlvllqev wseqdysdlk
       61 vklagcypfs hyfrsgvigs glcvfsrfpi ldtllyqysl ngypymlqhg dwfcgksvgl
      121 vimkisgiif nvyvthlhae ycrdkdaylp hrlvqawela qfirhtskaa dvvllggdln
      181 mhpedvgirl lrgwtglqda faeamhfegc kngctlvpdn cftdkaellp fplgiridyi
      241 lykaissftv kceelktttg rapgvdipfs dheavmatlh iqrqgqpaga tlgtadlala
      301 dvvteartev gvglqaarrq ryssgrmavl allllllqaa aalatlaglg tdqpfpklsf
      361 cllaflalgv lvlatglhlf htmevkmlhg tedqmwmvlr alqerpseg
//
LOCUS       XP_041324237             409 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin phosphodiesterase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324237
VERSION     XP_041324237.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468303.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508102.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="sphingomyelin phosphodiesterase 2"
                     /calculated_mol_wt=45524
     Region          14..279
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(15,49,136,178,180,238,271..272)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(49,271)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(136,180,272)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     CDS             1..409
                     /gene="SMPD2"
                     /coded_by="XM_041468303.1:380..1609"
                     /db_xref="GeneID:121353998"
ORIGIN      
        1 megeptlrlr ifnlncwair ylskrrqqrv rligdtlrqe gfdlvllqev wseqdysdlk
       61 vklagcypfs hyfrsgvigs glcvfsrfpi ldtllyqysl ngypymlqhg dwfcgksvgl
      121 vimkisgiif nvyvthlhae ycrdkdaylp hrlvqawela qfirhtskaa dvvllggdln
      181 mhpedvgirl lrgwtglqda faeamhfegc kngctlvpdn cftdkaellp fplgiridyi
      241 lykaissftv kceelktttg rapgvdipfs dheavmatlh iqrqgqpaga tlgtadlala
      301 dvvteartev gvglqaarrq ryssgrmavl allllllqaa aalatlaglg tdqpfpklsf
      361 cllaflalgv lvlatglhlf htmevkmlhg tedqmwmvlr alqerpseg
//
LOCUS       XP_041324260             176 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-B5-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324260
VERSION     XP_041324260.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468326.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508135.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>176
                     /product="protocadherin gamma-B5-like"
     Region          41..133
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          141..>176
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..176
                     /gene="LOC121354021"
                     /coded_by="XM_041468326.1:<1..>530"
                     /codon_start=2
                     /db_xref="GeneID:121354021"
ORIGIN      
        1 fevllhnpln ifhvevaied vndnspvfsk paldleigew tlpgarfple mardadvgrn
       61 clvtyqlasn psfsltlkek pggkkqpelv lerpldrekq ssvelvltav dsgeparsgt
      121 vlvlvnvtdl ndnppmfsks vyearvaenl pagslalrvv atdadlgsng rvsysf
//
LOCUS       XP_041324273             143 aa            linear   VRT 06-MAY-2021
DEFINITION  phenylethanolamine N-methyltransferase-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324273
VERSION     XP_041324273.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468339.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508146.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..143
                     /product="phenylethanolamine N-methyltransferase-like"
     Region          <2..139
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..143
                     /gene="LOC121354027"
                     /coded_by="XM_041468339.1:<1..432"
                     /db_xref="GeneID:121354027"
ORIGIN      
        1 pwqdkerrlr qrlrrilpid vhrpeplgap lrpradalls afcleavspd raafvralah
       61 vgnllrpggh avllgalges fylagparlp vvplresdvr ealaaagfal relrsyampp
      121 alrtgvddvd gvffahaqkp les
//
LOCUS       XP_041324285             381 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: REST corepressor 2-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324285
VERSION     XP_041324285.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468351.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508147.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>381
                     /product="LOW QUALITY PROTEIN: REST corepressor 2-like"
     Region          116..160
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Site            order(117,146..147,149..150,152..154,156..158)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          312..350
                     /region_name="Myb_DNA-binding"
                     /note="Myb-like DNA-binding domain; pfam00249"
                     /db_xref="CDD:459731"
     CDS             1..381
                     /gene="LOC121354035"
                     /coded_by="XM_041468351.1:1..>1145"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121354035"
ORIGIN      
        1 mpsvmekpsg ilsrsrakag gaagpphsed easedehahg extpspknkk kttkpprtce
       61 pptxppqtpp vdryiamakd khgynieqal gmllwhkhdv eksladlanf tpfpdewtve
      121 dkvlfeqafs fhgksfariq qmlpdklips lvkyyyswkk trsrtsvmdr qarrllgrrd
      181 rddrqgpqkg cpnqlkptep indralinap grcqacfpka gprkepqyrh hpparqrrrp
      241 prgmrlsred vaevtanpdl garalrqldc qlvalkrqvq rikqinsglr qaldgglegl
      301 rppegsskfs srwttdeqll vvqalrrygr dfpavaavlg nktaaqvrsf vlgprrrpgl
      361 erllqgqgep pgerpeppeg c
//
LOCUS       XP_041324297              84 aa            linear   VRT 06-MAY-2021
DEFINITION  N-alpha-acetyltransferase 40 [Pyrgilauda ruficollis].
ACCESSION   XP_041324297
VERSION     XP_041324297.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468363.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508147.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="N-alpha-acetyltransferase 40"
                     /calculated_mol_wt=9411
     CDS             1..84
                     /gene="NAA40"
                     /coded_by="XM_041468363.1:58..312"
                     /db_xref="GeneID:121354045"
ORIGIN      
        1 mgrkssrake kkqrrleera amaavcakve aanqlrdple afpvfkkydr nglnvsiecr
       61 rvsglepstl dwafeltkan mqsl
//
LOCUS       XP_041324310              78 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L11, mitochondrial, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324310
VERSION     XP_041324310.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468376.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508177.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>78
                     /product="39S ribosomal protein L11, mitochondrial"
     Site            order(42,46)
                     /site_type="active"
                     /note="putative thiostrepton binding site [active]"
                     /db_xref="CDD:100101"
     Region          44..>78
                     /region_name="Ribosomal_L11"
                     /note="Ribosomal protein L11. Ribosomal protein L11,
                     together with proteins L10 and L7/L12, and 23S rRNA, form
                     the L7/L12 stalk on the surface of the large subunit of
                     the ribosome. The homologous eukaryotic cytoplasmic
                     protein is also called 60S ribosomal...; cl29338"
                     /db_xref="CDD:475185"
     CDS             1..78
                     /gene="MRPL11"
                     /coded_by="XM_041468376.1:152..>385"
                     /db_xref="GeneID:121354051"
ORIGIN      
        1 msraarsvra aagaksgrga aprpvrilip aggaapgppl gpvlgqrgvs iaafckdfne
       61 rtrdikpgvp lrvrllvh
//
LOCUS       XP_041324326             839 aa            linear   VRT 06-MAY-2021
DEFINITION  ryanodine receptor 1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324326
VERSION     XP_041324326.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468392.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508180.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>839
                     /product="ryanodine receptor 1-like"
     Region          35..169
                     /region_name="SPRY3_RyR"
                     /note="SPRY domain 3 (SPRY3) of ryanodine receptor (RyR);
                     cd12879"
                     /db_xref="CDD:293937"
     CDS             1..839
                     /gene="LOC121354054"
                     /coded_by="XM_041468392.1:<1..>2517"
                     /db_xref="GeneID:121354054"
ORIGIN      
        1 yyysvrlfag qepgsawyyy svrlfagqep gsawyyysvr lfagqepgsa wvgwvtphfh
       61 qhdpdfelsr vrsvtvtmgd drgnvhdsik rsncymvwgg efatptqqar vshtdlvigc
      121 lvdlatglmt ftangkeint ffqvepntkl fpavfvqptt qnvlqfelgk lknimpisaa
      181 mfsserqnpa pqcpprlviq qltpvtwsrm pteylavesa rlgerqgwav ecseplqmma
      241 lhipeedrci dilelweree llqfqchtlr lycavcalgn nrvahalcsh vdqaqllfai
      301 etpelpgplr agyydlllam hldaaqrars smsaefivpi teatrsialf pdggrcpgpp
      361 gvgpsaclrp qphfsepcfi ragggggrap lspaipldel gakamrmlae avagggphar
      421 dpvggsvefq lvpvlklvsa llavgalgdg dvrrvlrmie prvfgdgegr reegqeeeee
      481 eegvkaieag eeeegedeea rrkkaveage leeeeeeeee vrrrkaieag elqeeeedee
      541 earrtkaiea aevqeeeeek eeeleegllq mklpesvklq gdlgtacgdm wgtrggvyrg
      601 gpvtwcppvs prvppcpqin mlmqykggae deecpvpgdi rdelldfhnd llahcgvelt
      661 eeeeeeeeet slrqrllglv qkvvgvrgpp keeetppeep pvpstlqeli sqtmvhwaqe
      721 sfiqspalvr amfsllhrqy dalgelgral pkayaisats vpdttallec lgqirslliv
      781 qmgpeeenlm iqsigcvgps aspvsslgmq gstpldvaaa svidnnelal alkeqdlek
//
LOCUS       XP_041324346             575 aa            linear   VRT 06-MAY-2021
DEFINITION  rhodopsin kinase GRK1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324346
VERSION     XP_041324346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508191.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="rhodopsin kinase GRK1"
                     /calculated_mol_wt=62052
     Region          37..199
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     Region          208..487
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(216..219,222,224,237,239,271,287..290,337,341..342,
                     344,350..351)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..575
                     /gene="GRK1"
                     /coded_by="XM_041468412.1:1..1728"
                     /db_xref="GeneID:121354065"
ORIGIN      
        1 mdiggletvv ansayvsarg gpgggkerrs karlrlphis qcealraqlg gtagtqnggp
       61 gapngappgh tqdggqetsf rwqcveqpig kllfrrfleg saqfaaagal waeieafeqc
      121 edaereaaak rlrsrfftpg gsehcgflsa aatappagst lpcdafvpar rellahleaa
      181 awgpyrgspe fsrfvqfkwl esqavnadaf vefrvlgkgg fgevcacqrr atgkmyankr
      241 lnkkrlkkrk gyeaalvekr ilarvhsrfi vslacafqtk tdlclvmtim nggdlryhiy
      301 nvdeenpgfa epravfytaq illglehlhq hrivyrdlkp envllddagg dtgtlggqgd
      361 tggigdtggf mapellkned ydwsvdyftl gvtiyemlea kgpfrrrgek venkevtrri
      421 lndpvtysek fsaaareace gllakdpqar lgfrdndcaq lkahpffgsi nwgrleaglv
      481 pppfvpdprr vyakdlgdvg afstvkgvel dagdaalcda fasgtvpipw qeelietgvf
      541 eelnvwgapg tlppdldpsa aggagggkss tchll
//
LOCUS       XP_041324358             194 aa            linear   VRT 06-MAY-2021
DEFINITION  kallikrein-14-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324358
VERSION     XP_041324358.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468424.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508202.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..194
                     /product="kallikrein-14-like"
     Region          4..188
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; smart00020"
                     /db_xref="CDD:214473"
     Site            order(142,163,165)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..194
                     /gene="LOC121354074"
                     /coded_by="XM_041468424.1:<1..586"
                     /codon_start=2
                     /db_xref="GeneID:121354074"
ORIGIN      
        1 elqvllgtnt lragscrelq vligtntlra gtgqvrrvsr lqvhpaydpr rndndfmllh
       61 ldapvrfgpr vkkirvatrc pragqncsvs gwgttkspga klprdlqcaq vqtfgpeqca
      121 raygsavtrn mfcagvpqgg vdscqgdsgg plvcggylqg vvswglavcg qrgnpgvysn
      181 vcrasawirr tigq
//
LOCUS       XP_041324372             737 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydroxyacetone phosphate acyltransferase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324372
VERSION     XP_041324372.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468438.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="dihydroxyacetone phosphate acyltransferase
                     isoform X1"
                     /calculated_mol_wt=82991
     Region          124..696
                     /region_name="PlsB"
                     /note="Glycerol-3-phosphate O-acyltransferase [Lipid
                     transport and metabolism]; COG2937"
                     /db_xref="CDD:442180"
     CDS             1..737
                     /gene="GNPAT"
                     /coded_by="XM_041468438.1:1..2214"
                     /db_xref="GeneID:121354081"
ORIGIN      
        1 mappmarcpr lppphrirqp grggagpwap reaaaggrta rrgragdrga grrggarrtm
       61 ataaaaapgr arrgapmysq keltskkrde fedileerrl ssdlryamkc ytpviykgls
      121 pckpnaiksa vlqseqvqyv ikqlakemge spdiiqeeat eildemghhm qlgavrffaf
      181 tlskifkqlf qrvcvneegm qrlqhaiqeh pvvllpshrs yvdflmlsyl lytydlalpv
      241 iaagidflgm kivgellrra gaffmrrsfg gnrlywavfa eyvktmlrsg yapieffleg
      301 trsrtaktlt pkfgllsivm epffkrevfd tylvpisisy erileeslya yellgvpkpk
      361 estsgllkar rilsdnfgti hiyvgqpvsl rtlasgrinr cpynlvprhl pqkpsediqe
      421 fvsdvaykme llqienmvls pwvlvaavll qnlpamefdl liektlwlkg ltqtfggfie
      481 wpenlcakka vlsglilhsn iarlvdghmv lndkgvedga vgeivfrhal avlmcatyrn
      541 qllnvfvrpa lvavalqmap sfrkeevysc fnflrdvfsd efiffpgisl kdfeegcfll
      601 tkcdaiqtsq qeiyptdkgs dtvsflsamf rpfvegyqli frylskemke aftekqfipg
      661 vrnfvfqlle kgstqcyeal ssdmqknals alvqlgavkk kkmpngftyn vnqeavskil
      721 dmfdaripvq kpvaarl
//
LOCUS       XP_041324380             736 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydroxyacetone phosphate acyltransferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324380
VERSION     XP_041324380.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468446.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..736
                     /product="dihydroxyacetone phosphate acyltransferase
                     isoform X2"
                     /calculated_mol_wt=82863
     Region          123..695
                     /region_name="PlsB"
                     /note="Glycerol-3-phosphate O-acyltransferase [Lipid
                     transport and metabolism]; COG2937"
                     /db_xref="CDD:442180"
     CDS             1..736
                     /gene="GNPAT"
                     /coded_by="XM_041468446.1:1..2211"
                     /db_xref="GeneID:121354081"
ORIGIN      
        1 mappmarcpr lppphrirqp grggagpwap reaaaggrta rrgragdrga grrggarrtm
       61 ataaaaapgr arrgapmysk eltskkrdef edileerrls sdlryamkcy tpviykglsp
      121 ckpnaiksav lqseqvqyvi kqlakemges pdiiqeeate ildemghhmq lgavrffaft
      181 lskifkqlfq rvcvneegmq rlqhaiqehp vvllpshrsy vdflmlsyll ytydlalpvi
      241 aagidflgmk ivgellrrag affmrrsfgg nrlywavfae yvktmlrsgy apiefflegt
      301 rsrtaktltp kfgllsivme pffkrevfdt ylvpisisye rileeslyay ellgvpkpke
      361 stsgllkarr ilsdnfgtih iyvgqpvslr tlasgrinrc pynlvprhlp qkpsediqef
      421 vsdvaykmel lqienmvlsp wvlvaavllq nlpamefdll iektlwlkgl tqtfggfiew
      481 penlcakkav lsglilhsni arlvdghmvl ndkgvedgav geivfrhala vlmcatyrnq
      541 llnvfvrpal vavalqmaps frkeevyscf nflrdvfsde fiffpgislk dfeegcfllt
      601 kcdaiqtsqq eiyptdkgsd tvsflsamfr pfvegyqlif rylskemkea ftekqfipgv
      661 rnfvfqllek gstqcyeals sdmqknalsa lvqlgavkkk kmpngftynv nqeavskild
      721 mfdaripvqk pvaarl
//
LOCUS       XP_041324394             376 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324394
VERSION     XP_041324394.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468460.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..376
                     /product="programmed cell death protein 2"
                     /calculated_mol_wt=41055
     Region          142..179
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          268..369
                     /region_name="PDCD2_C"
                     /note="Programmed cell death protein 2, C-terminal
                     putative domain; pfam04194"
                     /db_xref="CDD:461221"
     CDS             1..376
                     /gene="PDCD2"
                     /coded_by="XM_041468460.1:67..1197"
                     /db_xref="GeneID:121354091"
ORIGIN      
        1 mapgvelgfa aaaaegpgga wrlhstyfps kvggrpawlg eaglpgpaal rcgqcqqpra
       61 fllqlyaplp grpdafhrtl fvfacrspac yrlagpcgpf rvfrnqlprr ndtypeeppp
      121 eepppgpgpa pprrlgsgaa lcrvcgclgp rccgrcrraa ycgpehqald wrrghrrscg
      181 qhaagddsad aipehneflf peyeiliepe epefptdstd deqgaedtsk dakeqgelga
      241 agtadeafqs ldeetleama kheteeekif qvfkkqvaae peqiirycrg gegplwvsge
      301 nrpeekdipn cvcgakrife fqimpqllnh lqvdslgesi dwgtlvvytc adscgggsey
      361 leefiwkqdy smgstl
//
LOCUS       XP_041324407             296 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C1orf131 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324407
VERSION     XP_041324407.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468473.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="uncharacterized protein C1orf131 homolog"
                     /calculated_mol_wt=32334
     Region          161..260
                     /region_name="DUF4602"
                     /note="Domain of unknown function (DUF4602); pfam15375"
                     /db_xref="CDD:464683"
     CDS             1..296
                     /gene="CUNH1orf131"
                     /coded_by="XM_041468473.1:1..891"
                     /db_xref="GeneID:121354097"
ORIGIN      
        1 mrcgggrrgh ramggamsga tgaaggqtla rppaaaamgp rephrrleav lgtlydlgek
       61 pggawraaed getravppsa eeeeeeeeer repqpaaggr rgargffgel raelsaagta
      121 apppaappav evvvfrgrkr kerqgpsvap aggaqtqivn eeknavreef nfekarlevh
      181 kfgitgykkq eqrvweqera imlgakppkk ahvnyrtyqe klkekktvkd adkekehkgd
      241 sikkkkkkhk eqerkakrkk svpsiwpagq vgkfrngtli lqscdikkik sskvsk
//
LOCUS       XP_041324418             300 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA-box-binding protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324418
VERSION     XP_041324418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468484.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="TATA-box-binding protein"
                     /calculated_mol_wt=32778
     Region          123..299
                     /region_name="PLN00062"
                     /note="TATA-box-binding protein; Provisional"
                     /db_xref="CDD:177693"
     CDS             1..300
                     /gene="LOC121354105"
                     /coded_by="XM_041468484.1:266..1168"
                     /db_xref="GeneID:121354105"
ORIGIN      
        1 mdqnnslppy aqglaspqga mtpgipifsp mmpygtgltp qpvqstnsls ileeqqrqqq
       61 qaaqqstsqq atqgtsgqtp qlfhsqtltt aplpgttply sspmtpmtpi tpatpasess
      121 givpqlqniv stvnlgckld lktialrarn aeynpkrfaa vimrireprt talifssgkm
      181 vctgakseeq srlaarkyar vvqklgfpak fldfkiqnmv gscdvkfpir leglvlthqq
      241 fssyepelfp gliyrmikpr ivllifvsgk vvltgakvra eiyeafeniy pilkgfrktt
//
LOCUS       XP_041324426             300 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA-box-binding protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324426
VERSION     XP_041324426.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468492.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="TATA-box-binding protein"
                     /calculated_mol_wt=32778
     Region          123..299
                     /region_name="PLN00062"
                     /note="TATA-box-binding protein; Provisional"
                     /db_xref="CDD:177693"
     CDS             1..300
                     /gene="LOC121354105"
                     /coded_by="XM_041468492.1:513..1415"
                     /db_xref="GeneID:121354105"
ORIGIN      
        1 mdqnnslppy aqglaspqga mtpgipifsp mmpygtgltp qpvqstnsls ileeqqrqqq
       61 qaaqqstsqq atqgtsgqtp qlfhsqtltt aplpgttply sspmtpmtpi tpatpasess
      121 givpqlqniv stvnlgckld lktialrarn aeynpkrfaa vimrireprt talifssgkm
      181 vctgakseeq srlaarkyar vvqklgfpak fldfkiqnmv gscdvkfpir leglvlthqq
      241 fssyepelfp gliyrmikpr ivllifvsgk vvltgakvra eiyeafeniy pilkgfrktt
//
LOCUS       XP_041324435             300 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA-box-binding protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324435
VERSION     XP_041324435.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468501.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="TATA-box-binding protein"
                     /calculated_mol_wt=32778
     Region          123..299
                     /region_name="PLN00062"
                     /note="TATA-box-binding protein; Provisional"
                     /db_xref="CDD:177693"
     CDS             1..300
                     /gene="LOC121354105"
                     /coded_by="XM_041468501.1:280..1182"
                     /db_xref="GeneID:121354105"
ORIGIN      
        1 mdqnnslppy aqglaspqga mtpgipifsp mmpygtgltp qpvqstnsls ileeqqrqqq
       61 qaaqqstsqq atqgtsgqtp qlfhsqtltt aplpgttply sspmtpmtpi tpatpasess
      121 givpqlqniv stvnlgckld lktialrarn aeynpkrfaa vimrireprt talifssgkm
      181 vctgakseeq srlaarkyar vvqklgfpak fldfkiqnmv gscdvkfpir leglvlthqq
      241 fssyepelfp gliyrmikpr ivllifvsgk vvltgakvra eiyeafeniy pilkgfrktt
//
LOCUS       XP_041324448             238 aa            linear   VRT 06-MAY-2021
DEFINITION  proteasome subunit beta type-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324448
VERSION     XP_041324448.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468514.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="proteasome subunit beta type-1"
                     /calculated_mol_wt=26055
     Region          27..238
                     /region_name="proteasome_beta_type_1"
                     /note="proteasome beta type-1 subunit. The 20S proteasome,
                     multisubunit proteolytic complex, is the central enzyme of
                     nonlysosomal protein degradation in both the cytosol and
                     nucleus. It is composed of 28 subunits arranged as four
                     homoheptameric rings that...; cd03757"
                     /db_xref="CDD:239726"
     Site            order(35,51,53,67,165,211,214..215)
                     /site_type="active"
                     /db_xref="CDD:239726"
     Site            order(53,56,58..63,83,85,100,112,115..116,118..119,122,
                     125,150,152,154..157,160,168..169,171..172,175..177,202,
                     209..212,215..216)
                     /site_type="other"
                     /note="beta subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239726"
     CDS             1..238
                     /gene="PSMB1"
                     /coded_by="XM_041468514.1:64..780"
                     /db_xref="GeneID:121354124"
ORIGIN      
        1 mlstagcgps rpetgyglea pvqhyrfspy tfnggtvlai agedfcivas dtrlsegysi
       61 hsrdspkcyk lteqtvigct gfhgdcltlt kiiearlkmy khsnnktmtt gaiaamlsti
      121 lysrrffpyy vyniigglde egkgavysfd pvgsyerdtf kaggsasaml qplldnqigf
      181 knmqnvehvp ltlekalqlv kdvfisaaer dvytgdalki civtkdgike qtvqlrkd
//
LOCUS       XP_041324461             839 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 13 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324461
VERSION     XP_041324461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..839
                     /product="tetratricopeptide repeat protein 13 isoform X1"
                     /calculated_mol_wt=95088
     Region          107..223
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          122..147
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          155..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          185..427
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          192..220
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          225..253
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(226,229..230,233..234,236,260,263..264,267..268,
                     270..271,294,297..298,301..302,305)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          258..288
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          293..320
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          327..355
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          361..388
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..839
                     /gene="TTC13"
                     /coded_by="XM_041468527.1:1..2520"
                     /db_xref="GeneID:121354131"
ORIGIN      
        1 mravkmapag glapgpwvpl allallarta lalterypal sliqqerhrq rhgpagewae
       61 qysaecdssf lhfhesdcdm ggssscesil slntekilsq akllaeqkrf pfatdndntn
      121 eelaiayvli gnglydeair hfstmlqeep elvsaiygrg iaygkkglhd mknaelalfe
      181 lsrvislepd hpevfeqrae ilsplgrise alsdltkaiq lqpsarlyrh rgtlyfised
      241 yatahedfqr slelnknqpi amlykgltff hrgllkeaie sfkealkqka dfidaykslg
      301 qayrelgnfd aatesfqkal llnqnhvqtl qlkgmmlyhh gsldealknf krclqlepyn
      361 evcqymkgls hvamgqfyeg ikaqtkvmln dplpgqkanp eylkvkylre ysrylhahld
      421 tplteyntdt dlpgnfkdhw aknlpflien yeeqpglqph ikdvlfqnfe sykpdvqeli
      481 cvadhlgsmm qyetpgflpn krihramgla slevmqavqr twanskvrmn gktrlmqwrd
      541 mfdiavkwrr iadpdqpvlw ldqmparsls rgfnnhinli rgqvinmryl eyfekilhfi
      601 kdrilvyhga nnpkgllevr ealekvhkve dllpimkqfn sktrdgftvn tkvpslkdqg
      661 keydgftiti tgdkvgnilf svetqtteer tqlyhaeida lykdltakgk ililsaelge
      721 vdavcnlils lvyyfynlmp lsrgssviay svimgalmas gkevsgkipk gklvdfeamt
      781 apgseaftki arswmnlksi spsykslpsv setfptlrtm ievlntdssh clkktivvv
//
LOCUS       XP_041324470             695 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 13 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324470
VERSION     XP_041324470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..695
                     /product="tetratricopeptide repeat protein 13 isoform X2"
                     /calculated_mol_wt=79275
     Region          11..42
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          41..283
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          48..76
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          81..109
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(82,85..86,89..90,92,116,119..120,123..124,126..127,
                     150,153..154,157..158,161)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          114..144
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          149..176
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          183..211
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          217..244
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..695
                     /gene="TTC13"
                     /coded_by="XM_041468536.1:204..2291"
                     /db_xref="GeneID:121354131"
ORIGIN      
        1 mlqeepelvs aiygrgiayg kkglhdmkna elalfelsrv islepdhpev feqraeilsp
       61 lgrisealsd ltkaiqlqps arlyrhrgtl yfisedyata hedfqrslel nknqpiamly
      121 kgltffhrgl lkeaiesfke alkqkadfid aykslgqayr elgnfdaate sfqkalllnq
      181 nhvqtlqlkg mmlyhhgsld ealknfkrcl qlepynevcq ymkglshvam gqfyegikaq
      241 tkvmlndplp gqkanpeylk vkylreysry lhahldtplt eyntdtdlpg nfkdhwaknl
      301 pflienyeeq pglqphikdv lfqnfesykp dvqelicvad hlgsmmqyet pgflpnkrih
      361 ramglaslev mqavqrtwan skvrmngktr lmqwrdmfdi avkwrriadp dqpvlwldqm
      421 parslsrgfn nhinlirgqv inmryleyfe kilhfikdri lvyhgannpk gllevreale
      481 kvhkvedllp imkqfnsktr dgftvntkvp slkdqgkeyd gftititgdk vgnilfsvet
      541 qtteertqly haeidalykd ltakgkilil saelgevdav cnlilslvyy fynlmplsrg
      601 ssviaysvim galmasgkev sgkipkgklv dfeamtapgs eaftkiarsw mnlksispsy
      661 kslpsvsetf ptlrtmievl ntdsshclkk tivvv
//
LOCUS       XP_041324481             315 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protein ARV1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324481
VERSION     XP_041324481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468547.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 3 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="LOW QUALITY PROTEIN: protein ARV1"
                     /calculated_mol_wt=35429
     Region          89..279
                     /region_name="Arv1"
                     /note="Arv1-like family; pfam04161"
                     /db_xref="CDD:461202"
     CDS             1..315
                     /gene="ARV1"
                     /coded_by="XM_041468547.1:16..963"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     deleted 3 bases in 2 codons"
                     /db_xref="GeneID:121354142"
ORIGIN      
        1 mcaasagstg cprrpahraa valplgtwss pparsgvrqx aenhssrdaa rrglarlrfr
       61 trkrgggvea ltglgvlptg amaalgayrc iecngeatel yrdyqrgvlr isickscqkp
      121 vdkyieydpv iilinavlck aqayrhilfn tkinihgklc vfcllceayi rwlqlqdssq
      181 ntdpddliry akewdfyrmf giasleqisf figifitlww mtpemlkrks dfilllkall
      241 lstygkllli paviwehdyt plclafikvf vlisnsqair vtlnlnrilp wfaiffglil
      301 engvvclfqk mewdv
//
LOCUS       XP_041324493             252 aa            linear   VRT 06-MAY-2021
DEFINITION  centriole, cilia and spindle-associated protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324493
VERSION     XP_041324493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468559.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..252
                     /product="centriole, cilia and spindle-associated protein"
                     /calculated_mol_wt=28265
     Region          8..250
                     /region_name="CCSAP"
                     /note="Centriole, cilia and spindle-associated; pfam15748"
                     /db_xref="CDD:464842"
     CDS             1..252
                     /gene="LOC121354152"
                     /coded_by="XM_041468559.1:54..812"
                     /db_xref="GeneID:121354152"
ORIGIN      
        1 mvvparrvkt eymkrfkepk wescgacyle llhyrlsrrl leqahrpwlw dgweqdsgsg
       61 ggstagspsp pgagspaaar eeeeaaagaa apseagrasp ekekedqekq ekeeqektve
      121 rnsvkeadkt srtgrrpsrs alssrndrks akspqrtdap kenkhpfaly gwgerqtdtg
      181 sqkthnvcas asvneihesa lraknrrqve krklsqrrvr saeaentwrt kpspadnpwm
      241 teymrcysar al
//
LOCUS       XP_041324506             218 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-4A [Pyrgilauda ruficollis].
ACCESSION   XP_041324506
VERSION     XP_041324506.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468572.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="ras-related protein Rab-4A"
                     /calculated_mol_wt=24235
     Region          14..174
                     /region_name="Rab4"
                     /note="Rab GTPase family 4 (Rab4); cd04113"
                     /db_xref="CDD:206696"
     Site            14..15
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206696"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206696"
     Site            order(22..28,38,42,45,71,126..127,129..130,157..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206696"
     Site            order(28..39,43..44)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206696"
     Site            order(38,43..51)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206696"
     Site            order(43,47..54,61,63)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206696"
     Site            45
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206696"
     Site            order(46..52,63,65,74,82)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206696"
     Site            order(46..47,49,67..68,75,77,79..81)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206696"
     Site            46..50
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206696"
     Site            63..67
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206696"
     Site            68..71
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206696"
     Site            order(71,73..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206696"
     Site            74..79
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206696"
     Site            82..86
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206696"
     Site            91..96
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206696"
     Site            114..123
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206696"
     Site            126..129
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206696"
     Site            156..158
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206696"
     Site            172..174
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206696"
     CDS             1..218
                     /gene="RAB4A"
                     /coded_by="XM_041468572.1:116..772"
                     /db_xref="GeneID:121354160"
ORIGIN      
        1 msqsamsety dflfkflvig nagtgkscll hqfiekkfkd dsnhtigvef gskiinvggk
       61 yvklqiwdta gqerfrsvtr syyrgaagal lvyditsret ynaltnwltd armlasqniv
      121 iilcgnkkdl dadrevtfle asrfaqenel mfletsaltg enveeafvqc arkilnkies
      181 geldpermgs giqygdaalr qlrsprraqa qsaqdcgc
//
LOCUS       XP_041324519             573 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-binding cassette sub-family B member 10, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324519
VERSION     XP_041324519.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468585.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..573
                     /product="ATP-binding cassette sub-family B member 10,
                     mitochondrial"
                     /calculated_mol_wt=62253
     Region          4..549
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..573
                     /gene="ABCB10"
                     /coded_by="XM_041468585.1:60..1781"
                     /db_xref="GeneID:121354165"
ORIGIN      
        1 msapffmgkv idiiytnpse dftdsltslc allsgiflcg aaanatrvyl mqtagqrivk
       61 rlratmfssi vkqetaffdk trtgelinrl ssdtallgrs vtenlsdglr agaqasvgvg
      121 mmffvspsla afvlsvvppl avlaviygry lrkltkitqd slaeatqlae erignirtvr
      181 afgqevaeme kytnkvdyvl qlakkealar agffgatgls gnlivlsvly kggllmgsay
      241 mtvgelssfl myafwvgisi gglssfysel mkglgaggrl welierkpql pfnegitlgk
      301 dvfrgalefk dvefayptrp evsifkdfsl sipagsvmal vgpsgtgkst ivslllrlyd
      361 pisgtitvdg fdirqlnplw frtkigtvsq epilfscsia eniaygaedp stvtaeeilk
      421 vaeianaasf irdfpkgfdt vvgekgills ggqkqriaia rallknpkil lldeatsald
      481 aeneylvqea ldrlmegrtv liiahrlsti qnadfvavlg qgkilecgkh eellanpngl
      541 frklmqkqaf lqnndtfald lqsrekdilk env
//
LOCUS       XP_041324527             573 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-binding cassette sub-family B member 10, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324527
VERSION     XP_041324527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468593.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..573
                     /product="ATP-binding cassette sub-family B member 10,
                     mitochondrial"
                     /calculated_mol_wt=62253
     Region          4..549
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..573
                     /gene="ABCB10"
                     /coded_by="XM_041468593.1:436..2157"
                     /db_xref="GeneID:121354165"
ORIGIN      
        1 msapffmgkv idiiytnpse dftdsltslc allsgiflcg aaanatrvyl mqtagqrivk
       61 rlratmfssi vkqetaffdk trtgelinrl ssdtallgrs vtenlsdglr agaqasvgvg
      121 mmffvspsla afvlsvvppl avlaviygry lrkltkitqd slaeatqlae erignirtvr
      181 afgqevaeme kytnkvdyvl qlakkealar agffgatgls gnlivlsvly kggllmgsay
      241 mtvgelssfl myafwvgisi gglssfysel mkglgaggrl welierkpql pfnegitlgk
      301 dvfrgalefk dvefayptrp evsifkdfsl sipagsvmal vgpsgtgkst ivslllrlyd
      361 pisgtitvdg fdirqlnplw frtkigtvsq epilfscsia eniaygaedp stvtaeeilk
      421 vaeianaasf irdfpkgfdt vvgekgills ggqkqriaia rallknpkil lldeatsald
      481 aeneylvqea ldrlmegrtv liiahrlsti qnadfvavlg qgkilecgkh eellanpngl
      541 frklmqkqaf lqnndtfald lqsrekdilk env
//
LOCUS       XP_041324539             377 aa            linear   VRT 06-MAY-2021
DEFINITION  actin, alpha skeletal muscle [Pyrgilauda ruficollis].
ACCESSION   XP_041324539
VERSION     XP_041324539.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468605.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="actin, alpha skeletal muscle"
                     /calculated_mol_wt=41920
     Region          8..372
                     /region_name="ASKHA_NBD_actin"
                     /note="nucleotide-binding domain (NBD) of actin and
                     similar proteins; cd10224"
                     /db_xref="CDD:466823"
     CDS             1..377
                     /gene="ACTA1"
                     /coded_by="XM_041468605.1:171..1304"
                     /db_xref="GeneID:121354178"
ORIGIN      
        1 mcdedettal vcdngsglvk agfagddapr avfpsivgrp rhqgvmvgmg qkdsyvgdea
       61 qskrgiltlk ypiehgiitn wddmekiwhh tfynelrvap eehptlltea plnpkanrek
      121 mtqimfetfn vpamyvaiqa vlslyasgrt tgivldsgdg vthnvpiyeg yalphaimrl
      181 dlagrdltdy lmkiltergy sfvttaerei vrdikeklcy valdfenema taasssslek
      241 syelpdgqvi tignerfrcp etlfqpsfig mesagihett ynsimkcdid irkdlyannv
      301 msggttmypg iadrmqkeit alapstmkik iiapperkys vwiggsilas lstfqqmwit
      361 kqeydeagps ivhrkcf
//
LOCUS       XP_041324550             690 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324550
VERSION     XP_041324550.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468616.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..690
                     /product="calpain-9 isoform X1"
                     /calculated_mol_wt=78336
     Region          43..335
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          347..496
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cd00214"
                     /db_xref="CDD:238132"
     Site            order(385..387,394)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          522..690
                     /region_name="EFh_PEF"
                     /note="The penta-EF hand (PEF) family; cl25352"
                     /db_xref="CDD:355382"
     Region          522..550
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Site            order(534,541,574,576,578,585,604,606,608,615)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320054"
     Site            order(565,567,577,631,634,637..640,650,654,657..658,
                     661..662,665,674..681,683..689)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320054"
     Region          565..594
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          595..624
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          631..659
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          661..689
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     CDS             1..690
                     /gene="CAPN9"
                     /coded_by="XM_041468616.1:1..2073"
                     /db_xref="GeneID:121354187"
ORIGIN      
        1 mpclfqnskp rpaahpggar gthssgkgye qlkqeclrrg vlfedpdfpa cnsslffsen
       61 ppipfiwkrp gdivkdpkfi lggatrtdic qgdlgdcwll aaiasltlne ktlarvvpld
      121 qnfgpdyagi fhfqfwqhne wldvviddrl ptfkgrlvfl hsaelnefws allekayakl
      181 ngsyeslkgg stieamedft ggigetydvk eapdnfceil gkalkrcsmv gcsidtssaa
      241 eseartpfgl vkghaysvtg ieevsyrgqq vqlirirnpw gqvewngpws dnsaewhsvs
      301 pseqrrlsqa arddgefwmk fedfkvhfdk veicnltpda ledstahkwe vaihqgswvr
      361 gataggcrnf letfwtnpqi klhltekddg qdgctfiaal mqkgrrklkk lgaemltigy
      421 siyespgrde rlgkdffkyh pskarsktyi nlrevshrfk lppgdyilip ttfephqead
      481 fclrifsekk aitedldenv aidlpeplpp tpspqeteee kqfralfeqi sgkdmeisae
      541 eleyvlnavl kktknikfkn lsltscrnii slmgtngygk lefsefkvfw eklkkwinif
      601 lqfdfdksgs mssyelrgal kaagyqlnny llqlivlrys deqfqiefdd flnclirlen
      661 asrvfqalsv enkefinlni cefinlgmni
//
LOCUS       XP_041324557             664 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324557
VERSION     XP_041324557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..664
                     /product="calpain-9 isoform X2"
                     /calculated_mol_wt=75336
     Region          43..309
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          321..470
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cd00214"
                     /db_xref="CDD:238132"
     Site            order(359..361,368)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          496..664
                     /region_name="EFh_PEF"
                     /note="The penta-EF hand (PEF) family; cl25352"
                     /db_xref="CDD:355382"
     Region          496..524
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Site            order(508,515,548,550,552,559,578,580,582,589)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320054"
     Site            order(539,541,551,605,608,611..614,624,628,631..632,
                     635..636,639,648..655,657..663)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320054"
     Region          539..568
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          569..598
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          605..633
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          635..663
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     CDS             1..664
                     /gene="CAPN9"
                     /coded_by="XM_041468623.1:1..1995"
                     /db_xref="GeneID:121354187"
ORIGIN      
        1 mpclfqnskp rpaahpggar gthssgkgye qlkqeclrrg vlfedpdfpa cnsslffsen
       61 ppipfiwkrp gdivkdpkfi lggatrtdic qgdlgdcwll aaiasltlne ktlarvvpld
      121 qnfgpdyagi fhfqfwqhne wldvviddrl ptfkgrlvfl hsaelnefws allekayakl
      181 ngsyeslkgg stieamedft ggigetydvk eapdnfceil gkalkrcsmv gcsidtssaa
      241 eseartpfgl vkghaysvtg ieevsyrgqq vqlirirnpw gqvewngpws dkmkfedfkv
      301 hfdkveicnl tpdaledsta hkwevaihqg swvrgatagg crnfletfwt npqiklhlte
      361 kddgqdgctf iaalmqkgrr klkklgaeml tigysiyesp grderlgkdf fkyhpskars
      421 ktyinlrevs hrfklppgdy ilipttfeph qeadfclrif sekkaitedl denvaidlpe
      481 plpptpspqe teeekqfral feqisgkdme isaeeleyvl navlkktkni kfknlsltsc
      541 rniislmgtn gygklefsef kvfweklkkw iniflqfdfd ksgsmssyel rgalkaagyq
      601 lnnyllqliv lrysdeqfqi efddflncli rlenasrvfq alsvenkefi nlnicefinl
      661 gmni
//
LOCUS       XP_041324565             627 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-9 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324565
VERSION     XP_041324565.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468631.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="calpain-9 isoform X3"
                     /calculated_mol_wt=71490
     Region          43..272
                     /region_name="Peptidase_C2"
                     /note="Calpain family cysteine protease; pfam00648"
                     /db_xref="CDD:459889"
     Region          284..433
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cd00214"
                     /db_xref="CDD:238132"
     Site            order(322..324,331)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     Region          459..627
                     /region_name="EFh_PEF"
                     /note="The penta-EF hand (PEF) family; cl25352"
                     /db_xref="CDD:355382"
     Region          459..487
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Site            order(471,478,511,513,515,522,541,543,545,552)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320054"
     Site            order(502,504,514,568,571,574..577,587,591,594..595,
                     598..599,602,611..618,620..626)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320054"
     Region          502..531
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          532..561
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          568..596
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     Region          598..626
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320054"
     CDS             1..627
                     /gene="CAPN9"
                     /coded_by="XM_041468631.1:1..1884"
                     /db_xref="GeneID:121354187"
ORIGIN      
        1 mpclfqnskp rpaahpggar gthssgkgye qlkqeclrrg vlfedpdfpa cnsslffsen
       61 ppipfiwkrp gfwqhnewld vviddrlptf kgrlvflhsa elnefwsall ekayaklngs
      121 yeslkggsti eamedftggi getydvkeap dnfceilgka lkrcsmvgcs idtssaaese
      181 artpfglvkg haysvtgiee vsyrgqqvql irirnpwgqv ewngpwsdns aewhsvspse
      241 qrrlsqaard dgefwmkfed fkvhfdkvei cnltpdaled stahkwevai hqgswvrgat
      301 aggcrnflet fwtnpqiklh ltekddgqdg ctfiaalmqk grrklkklga emltigysiy
      361 espgrderlg kdffkyhpsk arsktyinlr evshrfklpp gdyilipttf ephqeadfcl
      421 rifsekkait edldenvaid lpeplpptps pqeteeekqf ralfeqisgk dmeisaeele
      481 yvlnavlkkt knikfknlsl tscrniislm gtngygklef sefkvfwekl kkwiniflqf
      541 dfdksgsmss yelrgalkaa gyqlnnyllq livlrysdeq fqiefddfln clirlenasr
      601 vfqalsvenk efinlnicef inlgmni
//
LOCUS       XP_041324577             461 aa            linear   VRT 06-MAY-2021
DEFINITION  angiotensinogen [Pyrgilauda ruficollis].
ACCESSION   XP_041324577
VERSION     XP_041324577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468643.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="angiotensinogen"
                     /calculated_mol_wt=50501
     Region          23..458
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     Site            order(411..421,435)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381010"
     CDS             1..461
                     /gene="AGT"
                     /coded_by="XM_041468643.1:83..1468"
                     /db_xref="GeneID:121354205"
ORIGIN      
        1 mnvvadflcl lacltvvtcd rvyvhpfnlf sfnesdcdkl eklvqegkti vpvsiesqtt
       61 peyedgmndk leapslstwg keersylsdl vvvlgmrfys alqkaqrgqn vllsptslys
      121 slvsfylgas nqtaldlqgl lgfvppsgnp dctstavgsn flsslrtier lvksgdeell
      181 fsktlslfsa pgialfqlfm ehllpsadaf yaravdfanp gkaakqinaf veaksegqsk
      241 gfladmdpsa ellfavdvrl avnvkqafpl kepqefwvds ntkvlvpmls imgtfkyktd
      301 asgtfsimev pisqtallvl lqpingsdle rlesqlpwqs sawlqrlspr eikltlpalt
      361 ledscdlqel ladmelpall gkgadfskis nasltlgkvi nkaffklasd gtdqpedpaa
      421 qkedgvyldv tlnkpflfav fekqsramlf lgrvvnplhe d
//
LOCUS       XP_041324587             727 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324587
VERSION     XP_041324587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..727
                     /product="delta-like protein 1"
                     /calculated_mol_wt=79597
     Region          24..184
                     /region_name="MNNL"
                     /note="N terminus of Notch ligand C2-like domain;
                     pfam07657"
                     /db_xref="CDD:462222"
     Region          166..228
                     /region_name="DSL"
                     /note="delta serrate ligand; smart00051"
                     /db_xref="CDD:128366"
     Region          295..333
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(295,298,313)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          336..371
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          <380..410
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          413..447
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          450..485
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(450,453,467)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          493..524
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     CDS             1..727
                     /gene="DLL1"
                     /coded_by="XM_041468653.1:830..3013"
                     /db_xref="GeneID:121354215"
ORIGIN      
        1 mggrflltla vlsvllsrcq vgssgvfelk lqefvnkkgl lsnrnccrgg gpgagglqqc
       61 dcktffrvcl khyqasvspe ppctygsait pvlgansfsv pdgaggadpa fsnpirfpfg
      121 ftwpgtfsli iealhtdspd dlttenperl isrlatqrhl avgeewsqdl hssgrtdlky
      181 syrfvcdehy ygegcsvfcr prddafghft cgergekvcn pgwkgqycte piclpgcdeq
      241 hgfcdkpgec kcrvgwqgry cdecirypgc lhgtcqqpwq cncqegwggl fcnqdlnyct
      301 hhkpckngat ctntgqgsyt cscrpgytgs nceievnecd anpcknggsc tdlensysct
      361 cppgfygknc elsamtcadg pcfnggrctd npdggyscrc plgysgfnce kkidycsssp
      421 cangaqcvdl gnsyicqcqa gftgrhcddn vddcasfpcv nggtcqdgin dysctcppgy
      481 ngkncstpvs rcehnpchng atchernnry vcecargygg lncqfllpep pqgpvivdft
      541 ekytegqnsq fpwiavcagi ilvlmlllgc aavvvcvrlr vqkrhhqpda crsetetmnn
      601 lancqrekdi sisvigatqi kntnkkvdfh sdnsdkngyk vrypsvdynl vhelknedsv
      661 keehskceak cetydseaee ksavqlksdt serkrpdsvy stskdtkyqs vyviseekde
      721 ciiatev
//
LOCUS       XP_041324598             708 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324598
VERSION     XP_041324598.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468664.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="exocyst complex component 8"
                     /calculated_mol_wt=80222
     Region          18..104
                     /region_name="Vps51"
                     /note="Vps51/Vps67; pfam08700"
                     /db_xref="CDD:462568"
     Region          162..274
                     /region_name="PH_RalBD_exo84"
                     /note="Exocyst complex 84-kDa subunit Ral-binding
                     domain/Pleckstrin Homology (PH) domain; cd01226"
                     /db_xref="CDD:269933"
     Site            order(162..208,211..274)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269933"
     Site            order(180..181,183,219..228,230,238,240..242,264,267,271,
                     274)
                     /site_type="other"
                     /note="RalA binding site [polypeptide binding]"
                     /db_xref="CDD:269933"
     Region          319..523
                     /region_name="Exo84_C"
                     /note="Exocyst component 84 C-terminal; pfam16528"
                     /db_xref="CDD:465161"
     CDS             1..708
                     /gene="EXOC8"
                     /coded_by="XM_041468664.1:81..2207"
                     /db_xref="GeneID:121354223"
ORIGIN      
        1 malslgeggg gsrlrrqles ggfaageyvk qlsqqsdgdr dlqehrqriq alseetaqsl
       61 krnvyqnyrq fietareisy lesemyqlsh ilteqkgime avtqalllqa drddpalgar
      121 raaaadpflp lsakdaaane egrqrtlttl lekvegcrdl lpespgkylv yngdlveyda
      181 dhmaqiqrvh aflmndcllv atalpnrrga yrydalypld glavvnvkdn ppmkdmfkll
      241 mfpesrifqa enakikkewl evleetkrnr alsekrrleq ealprpaptp pestnpfded
      301 eeeedepsae eevvdlslew iqelpedldv ciaqrdfega vdlldklney ladkpvsqpv
      361 kelrakvder vrqltdvlvf elspdrslrg gpratrravs qlirlgqstk acelflknra
      421 aavqtairql riegatllyi hklchvffts lletarefet dfagnngcys afvvwarssm
      481 rmfvdafskq vfdskeslst aaecvkvake hckqlseigl dltfiihall vkdikgalqs
      541 ykdiiieatk hrnseemwrk mnlmtpealg klreemrscg vgsfdqytgd dcwvnlsytv
      601 vaftkqtmaf leealklyfp elhmvllesl veiilvavqh vdyslrceqd pekkafirqn
      661 asflyetvlp vvekrfeegv gkpakqlqdl rnasrlmrvn pesttsvv
//
LOCUS       XP_041324610             499 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-dependent metalloprotease SPRTN [Pyrgilauda ruficollis].
ACCESSION   XP_041324610
VERSION     XP_041324610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468676.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..499
                     /product="DNA-dependent metalloprotease SPRTN"
                     /calculated_mol_wt=55867
     Region          2..>21
                     /region_name="MIU2_RNF168-like"
                     /note="second motif interacting with ubiquitin domain
                     found in RING finger protein 168 and similar domains;
                     cl41736"
                     /db_xref="CDD:425367"
     Region          67..172
                     /region_name="SprT-like"
                     /note="SprT-like family; pfam10263"
                     /db_xref="CDD:463033"
     Region          476..498
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     CDS             1..499
                     /gene="SPRTN"
                     /coded_by="XM_041468676.1:76..1575"
                     /db_xref="GeneID:121354233"
ORIGIN      
        1 mededfllal rlqreweeqd kaaaaaaaaa aaakrpdvsp yrsslrplsv vdeawelldp
       61 spdvhglfvh fnqtlfwgkl eavtvswspr mtssagicsy hersglcsir lsepllklrp
      121 rkdlvetllh emihallfvt hnykdreshg pefckhmrri nlltganvti yhnfydeinl
      181 yrqhwwrcng pcqsrapyfg yvkrsmnrap sahdfwwdeh qrtcggtftk vkepdkfsek
      241 skqktqtakp phfkstnkgk tqmhgnckdl tpfsgtgyrl gggdgvlsek ntnassstan
      301 seahgslhps avrtipipkn eikleklphg sifplhtnga seksnlalkr efpklsaant
      361 egdenecglp armacvaeet ssqgspvgkr ampssnwspk riclehtpra wgasqkksle
      421 cvntlqqwpk kedktafeky fnkkggtdvt tttktrveft qssaspsnpv rqerrvscpv
      481 cetdvlesei nehldscls
//
LOCUS       XP_041324621             419 aa            linear   VRT 06-MAY-2021
DEFINITION  egl nine homolog 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324621
VERSION     XP_041324621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="egl nine homolog 1 isoform X1"
                     /calculated_mol_wt=44499
     Region          32..69
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          217..384
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..419
                     /gene="EGLN1"
                     /coded_by="XM_041468687.1:391..1650"
                     /db_xref="GeneID:121354244"
ORIGIN      
        1 mandsgggag qggqgesssn ssssserdrq ycelcgkmen llrcgrcrss fycskehqrq
       61 dwkkhklicr gggasaagaa ggatephggh aaegsgsrag vgkgaappsp eapaeaaplt
      121 nnhvagaaag geaeasaaaq spspsgeavl lyrdksnlyp ggvqagpgga alrpngqtks
      181 lvpqrlaley ivpcmnkhgi cvvddflgke lgglvaeevr alhhtgrftd gqlvsqksds
      241 skdirgdkit wvegkepgcq tirllmnsmd dlirhcngkl gnykingrtk amvacypgng
      301 tgyvlhvdnp ngdgrcvtci yylnkdwdak vsggilrifp egkaqfadie pkfdrllffw
      361 sdrrnphevq pafatryait vwyfdadera rakvkyltge kgvrvelnkp tdsvgkdvl
//
LOCUS       XP_041324629             400 aa            linear   VRT 06-MAY-2021
DEFINITION  egl nine homolog 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324629
VERSION     XP_041324629.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468695.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..400
                     /product="egl nine homolog 1 isoform X2"
                     /calculated_mol_wt=42391
     Region          32..69
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     Region          217..384
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..400
                     /gene="EGLN1"
                     /coded_by="XM_041468695.1:391..1593"
                     /db_xref="GeneID:121354244"
ORIGIN      
        1 mandsgggag qggqgesssn ssssserdrq ycelcgkmen llrcgrcrss fycskehqrq
       61 dwkkhklicr gggasaagaa ggatephggh aaegsgsrag vgkgaappsp eapaeaaplt
      121 nnhvagaaag geaeasaaaq spspsgeavl lyrdksnlyp ggvqagpgga alrpngqtks
      181 lvpqrlaley ivpcmnkhgi cvvddflgke lgglvaeevr alhhtgrftd gqlvsqksds
      241 skdirgdkit wvegkepgcq tirllmnsmd dlirhcngkl gnykingrtk amvacypgng
      301 tgyvlhvdnp ngdgrcvtci yylnkdwdak vsggilrifp egkaqfadie pkfdrllffw
      361 sdrrnphevq pafatryait vwyfdadera rakvkyltgg
//
LOCUS       XP_041324648             737 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 67 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324648
VERSION     XP_041324648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="tripartite motif-containing protein 67 isoform
                     X1"
                     /calculated_mol_wt=79886
     Region          2..>47
                     /region_name="RING-HC_TRIM67"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 67 (TRIM67) and similar proteins;
                     cd16758"
                     /db_xref="CDD:438416"
     Region          182..227
                     /region_name="Bbox1_TRIM67_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 67 (TRIM67) and similar proteins;
                     cd19844"
                     /db_xref="CDD:380902"
     Region          255..299
                     /region_name="Bbox2_TRIM67_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 67 (TRIM67) and similar proteins;
                     cd19827"
                     /db_xref="CDD:380885"
     Region          301..427
                     /region_name="BBC"
                     /note="B-Box C-terminal domain; smart00502"
                     /db_xref="CDD:128778"
     Region          482..558
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(547..548,550..551)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          556..726
                     /region_name="SPRY_PRY_TRIM67_9"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     proteins, TRIM9 and TRIM67; cd12889"
                     /db_xref="CDD:293947"
     CDS             1..737
                     /gene="TRIM67"
                     /coded_by="XM_041468714.1:50..2263"
                     /db_xref="GeneID:121354263"
ORIGIN      
        1 meeelkcpvc gslfrepiil pcshnvclpc artiavqtpe seqhlppllh srgpapspaa
       61 apgagpgaaa gsaacldses aagggggdha dklslhsetd sgygsytpsl kspngvrvlp
      121 lvpappgaaa aprgagpass sltcpqchrs asldqrglrg fqrnrlleai vqryqqgraa
      181 aaakcqlcdr sppepaavlc eqcevlycaa cqlrchparg pfakhrlapp pahpgapggg
      241 gdgagkgagg grklptcaeh dlenysmycv scrspvcyqc leegkhnkhd vkalgamwkq
      301 hkaqlsqaln gvsdkakeak eflvqlknll qqiqengldy eaclvaqcda lvdaltrqka
      361 klltkvtker ehklkvvwdq inhctlklrq stglmeycle vikendpsgf lqisdalikr
      421 vqvsqeqwvk galepkvsae fdltldsepl lqsihqldfi qmkcrvppvp llqlekcctr
      481 nnsvtlawrm pplshnpveg yilelddgdg gqfrevyvgk etlctidglh fnstynarvk
      541 afnssgigpy sktvilqtsd vawftfdpss ahrdivlsnd nqtatcnsyd drvvlgtaaf
      601 skgvhywelh vdrydnhpdp afgiarinvv kdmmlgkddk awamyvdnnr swfmhcnsht
      661 nrteggvskg atvgvlldln khnltfying qqqgppafen iegvfmpals lnrnvqvtlh
      721 tglevpqsvk qpklpnn
//
LOCUS       XP_041324655             700 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 67 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324655
VERSION     XP_041324655.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468721.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..700
                     /product="tripartite motif-containing protein 67 isoform
                     X2"
                     /calculated_mol_wt=76554
     Region          2..112
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(7,10,22,24,27,30,107,110)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          145..190
                     /region_name="Bbox1_TRIM67_C-I"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 67 (TRIM67) and similar proteins;
                     cd19844"
                     /db_xref="CDD:380902"
     Region          218..262
                     /region_name="Bbox2_TRIM67_C-I"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 67 (TRIM67) and similar proteins;
                     cd19827"
                     /db_xref="CDD:380885"
     Region          264..390
                     /region_name="BBC"
                     /note="B-Box C-terminal domain; smart00502"
                     /db_xref="CDD:128778"
     Region          445..521
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(510..511,513..514)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          519..689
                     /region_name="SPRY_PRY_TRIM67_9"
                     /note="PRY/SPRY domain in tripartite motif-containing
                     proteins, TRIM9 and TRIM67; cd12889"
                     /db_xref="CDD:293947"
     CDS             1..700
                     /gene="TRIM67"
                     /coded_by="XM_041468721.1:50..2152"
                     /db_xref="GeneID:121354263"
ORIGIN      
        1 meeelkcpvc gslfrepiil pcshnvclpc artiavqtpe sehaaggggg dhadklslhs
       61 etdsgygsyt pslkspngvr vlplvpappg aaaaprgagp asssltcpqc hrsasldqrg
      121 lrgfqrnrll eaivqryqqg raaaaakcql cdrsppepaa vlceqcevly caacqlrchp
      181 argpfakhrl apppahpgap ggggdgagkg agggrklptc aehdlenysm ycvscrspvc
      241 yqcleegkhn khdvkalgam wkqhkaqlsq alngvsdkak eakeflvqlk nllqqiqeng
      301 ldyeaclvaq cdalvdaltr qkaklltkvt kerehklkvv wdqinhctlk lrqstglmey
      361 clevikendp sgflqisdal ikrvqvsqeq wvkgalepkv saefdltlds epllqsihql
      421 dfiqmkcrvp pvpllqlekc ctrnnsvtla wrmpplshnp vegyileldd gdggqfrevy
      481 vgketlctid glhfnstyna rvkafnssgi gpysktvilq tsdvawftfd pssahrdivl
      541 sndnqtatcn syddrvvlgt aafskgvhyw elhvdrydnh pdpafgiari nvvkdmmlgk
      601 ddkawamyvd nnrswfmhcn shtnrteggv skgatvgvll dlnkhnltfy ingqqqgppa
      661 feniegvfmp alslnrnvqv tlhtglevpq svkqpklpnn
//
LOCUS       XP_041324683             388 aa            linear   VRT 06-MAY-2021
DEFINITION  disrupted in schizophrenia 1 protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324683
VERSION     XP_041324683.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468749.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="disrupted in schizophrenia 1 protein-like"
                     /calculated_mol_wt=41402
     CDS             1..388
                     /gene="LOC121354283"
                     /coded_by="XM_041468749.1:43..1209"
                     /db_xref="GeneID:121354283"
ORIGIN      
        1 mwrpqpqprp ggtdrrrrgg gghaagagds qqlmpagslp kkklarrpgy mrpeaqrqie
       61 fqsagacagc spaelqhgrq lcggtegcal hrqcqndlel lrcsaassav apangvtsla
      121 atgntpgcce nlschngprs dsagtgvcpa attgkgdasa vcctwqksrg tkvskppnmy
      181 aldqtevnnn ceyqnrdgis hsagaqdsft ssfsfiqlsl nsasgvndve gksieedeiv
      241 lhpkttgnlq kpeemaqthe hlgdlccsss sgedlqhece spvnnklqdc esvslldida
      301 tfsystdssd aasagssvts gyessftvsd hnwdtlmkky epvlqdcllg nrstlklksl
      361 ilrlqrlqek aveeddydrd gcynrtqk
//
LOCUS       XP_041324697             835 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 27 [Pyrgilauda ruficollis].
ACCESSION   XP_041324697
VERSION     XP_041324697.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468763.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..835
                     /product="WD repeat-containing protein 27"
                     /calculated_mol_wt=92948
     Region          37..237
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          73..118
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          126..160
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          156..587
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(162,181,185,191..192,206..207,225,229,235..236,
                     300..301,316,349,356,368,385,408,414,422,435..436,454,475,
                     481..482,494..495,533,538,544..545,557..558,576,580,
                     586..587)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          166..204
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          211..237
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <519..816
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          520..557
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          563..602
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          607..654
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          664..701
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          708..754
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          762..798
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..835
                     /gene="WDR27"
                     /coded_by="XM_041468763.1:515..3022"
                     /db_xref="GeneID:121354287"
ORIGIN      
        1 megagagfas ggsqrdpdvv cekhlfkgkl peplfqlacs hhhfafpvsl nglciwntat
       61 aqplylsghh ysisalsfgn kinpllvcsa shervivwnl dectqkvqeg frpqgivigt
      121 llgmvlhvrf spddqqvavc agnhiymlsa kneaklaeld ghlspvtaae fctweknmli
      181 svsedrtfkv wdystsqliy qsgiitaafp llsllideen kqiitgcaeg qlwifslisd
      241 hnyrcvahid lkkeqekfcn kvwksgkeig egqnnsklck tdsmrpegsv etslpillie
      301 hcdffvcfhn eeniysaqnt syfwigtstg lliinlanfe leavlsyrdy sdlsiwiars
      361 caltrkagng kvlcliasmf edmiavlevn laalvrtqhs dflpcgneks lsviarctll
      421 ansplckclk knmkepsnki lavkntekdk plvfhnkiks sgytaaprma mfapntnlkk
      481 keaskwktsc kcknkeyple syppikyeke isvtckptpi fcvqysgdge llacgqadkt
      541 vlifnsnltg vhnvfsghdg avnsvgwshd rkwlvsased rtlrvwsvcn keptlilgke
      601 kfhktacfaq fyfidtfill ccgaefhlls fhldttkddl krykqrsvck lvqkfamtsa
      661 meitslsavn efysyivlta gsnraleifd lnagcstavi qeahvravhq icqnkgssfs
      721 tqqpeaynlf lttaagdgik lwdlrtlrce rrfeghssrc ypcgiavspc grfiasgsdd
      781 kyayiyemrs stflqklgrh tesvinvsfn pssprvkded vmwalvkglq mspgg
//
LOCUS       XP_041324709             279 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoU [Pyrgilauda ruficollis].
ACCESSION   XP_041324709
VERSION     XP_041324709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..279
                     /product="rho-related GTP-binding protein RhoU"
                     /calculated_mol_wt=29850
     Region          71..243
                     /region_name="Wrch_1"
                     /note="Wnt-1 responsive Cdc42 homolog (Wrch-1) is a Rho
                     family GTPase similar to Cdc42; cd04130"
                     /db_xref="CDD:133330"
     Site            order(72,102..103,105..106,108,110,119,123..124,126..128,
                     134,137)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133330"
     Site            77..84
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133330"
     Site            order(80..85,124..125,127,183,185,226..227)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133330"
     Site            101..107
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133330"
     Site            102
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133330"
     Site            order(103,126,134,136)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133330"
     Site            order(103..104,128,134)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133330"
     Site            order(104..105,134,137)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133330"
     Site            124..127
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133330"
     Site            order(127..128,134..137,142..144)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133330"
     Site            182..185
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133330"
     Site            225..227
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133330"
     CDS             1..279
                     /gene="RHOU"
                     /coded_by="XM_041468775.1:50..889"
                     /db_xref="GeneID:121354294"
ORIGIN      
        1 mppqqegeag yiskpvppgg cevppvpprr vrsgraaaal gaalggrcra agsgavagag
       61 agvgseprrs ikcvlvgdga vgktslvvsy ttngypteyi ptafdnfsav vsvdgkpvrl
      121 qlcdtagqde fdklrplcyt ntdifllcfs vvspssfqnv sekwvpeirc hcpkapiilv
      181 gtqsdlredv kvlieldkck ekpvseeaak lcaeeikaas yiecsaltqk nlkevfdaai
      241 vagiqysdtq qqpkkskcrt pdkmknlsks wwkkyccfv
//
LOCUS       XP_041324724             313 aa            linear   VRT 06-MAY-2021
DEFINITION  sulfotransferase 6B1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324724
VERSION     XP_041324724.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468790.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="sulfotransferase 6B1-like"
                     /calculated_mol_wt=35885
     Region          57..300
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..313
                     /gene="LOC121354298"
                     /coded_by="XM_041468790.1:758..1699"
                     /db_xref="GeneID:121354298"
ORIGIN      
        1 meksrktfvg fidkalatas tmrrdellfs ykgilyprtf yspetfkale sfearnddvi
       61 laaypksgtn wlsqiltdli aicqkktpgs essvnaeepe efpyleagda ekfermtklp
      121 sprfmvtnlh penlpqsifk nnikilllir npkdvatsyy hfsngvttvp syetwddfft
      181 dfmakktawg cyleylsewn kysdkenimt ityeeikenp alsvkniatf fgialteeel
      241 qlvverssfq smkknsdkth gsfgkvlfrk ggvsdwknlf sedqnekmdk afeehiagtt
      301 lgkklkydly ckv
//
LOCUS       XP_041324738             290 aa            linear   VRT 06-MAY-2021
DEFINITION  translin-associated protein X [Pyrgilauda ruficollis].
ACCESSION   XP_041324738
VERSION     XP_041324738.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468804.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..290
                     /product="translin-associated protein X"
                     /calculated_mol_wt=33085
     Region          43..256
                     /region_name="Translin-like"
                     /note="Translin and translin-associated factor-X (TRAX);
                     cl00957"
                     /db_xref="CDD:470011"
     Site            order(43..44,47,50..51,115..116,187..188,220,223..224,227,
                     230..231)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:271348"
     CDS             1..290
                     /gene="TSNAX"
                     /coded_by="XM_041468804.1:281..1153"
                     /db_xref="GeneID:121354305"
ORIGIN      
        1 msgkegsggf rkrkhdnfph gqrreekenv nppsalmksf ksfqleldtr hdkyerlvkl
       61 srditieskr tifllhrfis apngeeilse sevkldavrq kikqvaqeli gedmyqfhra
      121 ispglqeyve avsfqyfikt rslisveein kqliftaedr eettnmtsns hdkqphtwsl
      181 kvtpvdyllg vadltgelmr lcissvgngd idtpfelsqf lrqiydgftf igntgpyevs
      241 kklytlkqsl akvenacytl kvrgseipkh mladvfstkt elidqeeglp
//
LOCUS       XP_041324751             334 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C1orf198 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324751
VERSION     XP_041324751.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468817.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="uncharacterized protein C1orf198 homolog"
                     /calculated_mol_wt=37369
     Region          31..139
                     /region_name="DUF4706"
                     /note="Domain of unknown function (DUF4706); pfam15797"
                     /db_xref="CDD:464877"
     CDS             1..334
                     /gene="CUNH1orf198"
                     /coded_by="XM_041468817.1:90..1094"
                     /db_xref="GeneID:121354309"
ORIGIN      
        1 masmaaaiaa srtavmngnr pldererkrf syfsslspma rkimaekeri rerygpewer
       61 lpprqqdeii dkclvephvq aryaahrgtt rppappasyp slrlntgqkv vrfgdeditw
      121 qdehsapfsw etksqmefsi aslsiqeqgg aqmqneqrqp vkaapgvqvp kssqanktpg
      181 segliasrke eessfwkina erskfegdks efqsltpsqi ksmekgekpl psfyrqesap
      241 kettkaekps iikpeksvap stpsvslewe kprptqlpss lddfflpdpp qdlassrtnk
      301 edtdgtiltd pqmpgqtsts nvilktgfdf ldnw
//
LOCUS       XP_041324764             570 aa            linear   VRT 06-MAY-2021
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324764
VERSION     XP_041324764.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468830.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..570
                     /product="polypeptide N-acetylgalactosaminyltransferase 2"
                     /calculated_mol_wt=64595
     Region          138..433
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(142..144,146,175,200,203,207,223..225,307..308,
                     330..331,333,358,361,366)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(223,225,358)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          445..564
                     /region_name="beta-trefoil_Ricin_GALNT2"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in polypeptide N-acetylgalactosaminyltransferase 2
                     (GALNT2) and similar proteins; cd23434"
                     /db_xref="CDD:467312"
     Site            order(457..460,468,470,473,478..479)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467312"
     Site            order(497..500,508,510,513,518..519)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467312"
     Site            order(540..543,550,552,555,559..560)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467312"
     CDS             1..570
                     /gene="GALNT2"
                     /coded_by="XM_041468830.1:103..1815"
                     /db_xref="GeneID:121354316"
ORIGIN      
        1 mrrrsrlllc faflwvlgia yymysggsaa lagggggggr rkedpndidp krkevrgndv
       61 edkaqsvetl ppgkvwwqdf dqdsyvgatv vrsgqdpyar nkfnqvesdk lrmdrsipdt
      121 rhdqcqrkqw ridlpatsvv itfhnearsa llrtvvsvlk kspshlikei ilvddysndp
      181 ddgallgkie kvrvlrndrr eglmrsrvrg adaaqakvlt fldshcecne hwlepllerv
      241 aedktrvvsp iidvinmdnf qyvgasadlk ggfdwnlvfk wdymtpeqrr arqgnpvapi
      301 ktpmiagglf vmdksyfeel gkydmmmdvw ggenleisfr vwqcggslei ipcsrvghvf
      361 rkqhpytfpg gsgtvfarnt rraaevwmde yknfyyaavp sarnvpygni qsrmelrkrl
      421 sckpfkwyle nvypelrvpd hqdiafgalq qgtncldtlg hfadgvvgvy echnaggnqe
      481 waltkdksvk hmdlcltvvd rapgsliklq gcrendsrqk weqiesnskl rhvgsnlcld
      541 srnakngglt veicnpslsq qwkftlnlqq
//
LOCUS       XP_041324777             738 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324777
VERSION     XP_041324777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..738
                     /product="conserved oligomeric Golgi complex subunit 2
                     isoform X1"
                     /calculated_mol_wt=83251
     Region          14..146
                     /region_name="COG2"
                     /note="COG (conserved oligomeric Golgi) complex component,
                     COG2; pfam06148"
                     /db_xref="CDD:399271"
     Region          573..699
                     /region_name="COG2_C"
                     /note="COG complex component, COG2, C-terminal; pfam12022"
                     /db_xref="CDD:463434"
     CDS             1..738
                     /gene="COG2"
                     /coded_by="XM_041468843.1:13..2229"
                     /db_xref="GeneID:121354321"
ORIGIN      
        1 meakmnlprg penlcfdkde fmkadfdvdh fvsdcrkrvq leelredlel yykllktamv
       61 elinkdyadf vnlstnlvgm dkalnqlsvp lgqlreevms lkscvsegiq avddrmtkqe
      121 dirrkkmcvl rlihviqsve kiekilhsqg tkelsslegn splltgqvle riatefnqlq
      181 fhavqskgmp lldkvrpria gitamlqqsl egllleglqt snvdiirhcl rtyatidktr
      241 daealvgqvl vkpyvdemmv eqyvqshpng lqamynrlle fvphhcrllr evtggaisse
      301 kadivpgydf lvnsvwpeiv rgleeklpsl fnpgnpdvfh ekyttsmdfv rkferqcgsq
      361 asvkrlrahp syhsfnnkwn lpvyfqirfr eiagaleeal sdtleeapag ssfcllathm
      421 vwtslvkcws dqmflpllah rlwklslqil arysvfisev yvrpissest keskkpvpvg
      481 rkesslslnp sedqgsgssp eslplssiss tqliyvaadl dklqdripdi ldmikpklem
      541 igfkniscia galedsktsl sacvptlnnr iiqdlsessf aylksalevp rlyrrtnkev
      601 ptkaspyvds alkpfyrlqn dyrdalkqpm ihqwlegals estqkyyetv sdvlssvkkm
      661 eeslkrlkqa rrsatsnpvg tnggmsddnk irlqlaldve yfgeqiqkmg letssiksfs
      721 alaelvltak dqatleps
//
LOCUS       XP_041324786             600 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324786
VERSION     XP_041324786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="conserved oligomeric Golgi complex subunit 2
                     isoform X2"
                     /calculated_mol_wt=67804
     Region          14..146
                     /region_name="COG2"
                     /note="COG (conserved oligomeric Golgi) complex component,
                     COG2; pfam06148"
                     /db_xref="CDD:399271"
     Region          573..>598
                     /region_name="COG2_C"
                     /note="COG complex component, COG2, C-terminal; pfam12022"
                     /db_xref="CDD:463434"
     CDS             1..600
                     /gene="COG2"
                     /coded_by="XM_041468852.1:13..1815"
                     /db_xref="GeneID:121354321"
ORIGIN      
        1 meakmnlprg penlcfdkde fmkadfdvdh fvsdcrkrvq leelredlel yykllktamv
       61 elinkdyadf vnlstnlvgm dkalnqlsvp lgqlreevms lkscvsegiq avddrmtkqe
      121 dirrkkmcvl rlihviqsve kiekilhsqg tkelsslegn splltgqvle riatefnqlq
      181 fhavqskgmp lldkvrpria gitamlqqsl egllleglqt snvdiirhcl rtyatidktr
      241 daealvgqvl vkpyvdemmv eqyvqshpng lqamynrlle fvphhcrllr evtggaisse
      301 kadivpgydf lvnsvwpeiv rgleeklpsl fnpgnpdvfh ekyttsmdfv rkferqcgsq
      361 asvkrlrahp syhsfnnkwn lpvyfqirfr eiagaleeal sdtleeapag ssfcllathm
      421 vwtslvkcws dqmflpllah rlwklslqil arysvfisev yvrpissest keskkpvpvg
      481 rkesslslnp sedqgsgssp eslplssiss tqliyvaadl dklqdripdi ldmikpklem
      541 igfkniscia galedsktsl sacvptlnnr iiqdlsessf aylksalevp rlyrrtnkvl
//
LOCUS       XP_041324799             643 aa            linear   VRT 06-MAY-2021
DEFINITION  piggyBac transposable element-derived protein 5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324799
VERSION     XP_041324799.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468865.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..643
                     /product="piggyBac transposable element-derived protein 5"
                     /calculated_mol_wt=71709
     Region          240..606
                     /region_name="DDE_Tnp_1_7"
                     /note="Transposase IS4; pfam13843"
                     /db_xref="CDD:433521"
     CDS             1..643
                     /gene="PGBD5"
                     /coded_by="XM_041468865.1:25..1956"
                     /db_xref="GeneID:121354331"
ORIGIN      
        1 mwylemlswl lppmslhthr ggwcgrerea glspgggggg asptrclpaa vpepllllgc
       61 clrpqdpaep gqgergrlla aaemmaeggg gparrkalsl leaarsryes lqisddvfge
      121 sgqdssgnpf ystsadsrsa assqdeddde edqgrlavss prsraarrra praaaipaer
      181 rrqrqvcggs avpggsgpme eeeeeeeaek ggwtrslrdv ppphfkdgsg ptrkmpltas
      241 amdffqlfvp dnvlknmvvq tnmyakkyqe rfgsddawid vtltemkafl gymistsihh
      301 cesvlsiwss gfysnksial imtqsrfeki lkyfhivafr ssqtthslyk iqpfldslqn
      361 gfdsafrpsq aqvlheplid edpvfiatct erelrkrkkr kfslwvrqcs stgficqiyv
      421 hlkegsgadg ldalknkpql hsmvakslcq nasgknyiif tgpsitslnl feefekqeiy
      481 ccgllstrks dctglppsml nnsatpqsrg qyrirmkgnm slicwynkgh frfltnaysp
      541 vqqgviikrk sgeipcplav eafaahlsyi ckyddkysky fishkpnktw qqvfwfaisi
      601 ainnayilyk mseayhvtry sraqfgerlv kellgledts pth
//
LOCUS       XP_041324810            1651 aa            linear   VRT 06-MAY-2021
DEFINITION  unhealthy ribosome biogenesis protein 2 homolog isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324810
VERSION     XP_041324810.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468876.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1651
                     /product="unhealthy ribosome biogenesis protein 2 homolog
                     isoform X1"
                     /calculated_mol_wt=184742
     Region          <10..115
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1448..1644
                     /region_name="Urb2"
                     /note="Urb2/Npa2 family; pfam10441"
                     /db_xref="CDD:431289"
     CDS             1..1651
                     /gene="URB2"
                     /coded_by="XM_041468876.1:3365..8320"
                     /db_xref="GeneID:121354337"
ORIGIN      
        1 mtlcqfhivs prpprgpksv pssaspmssv gpaghaflqp tshhlgfspa tpdpswaers
       61 rgtrhgslvg pagghragsp agprarpgaa praegrslkg rqrrvsassl fpraapmaai
      121 ysgiylklks aktswedklk larfawishq cvlpnkeqvl ldwvsqalvs nynkkheled
      181 evveklwayl dnvihskrlq dllksgktvg lsfsiaeiin krlseaysek tqqnigtvls
      241 csngilstps lsiiytakce llvdllskls klacqqlasd davgsqlfsv lqltfaqyll
      301 iqrqqtnpnr vfgrvtshll qpclllrhll tvrswtqadd nhvcqhlsre irsqietllh
      361 aglfqpelfs sykeellseq esqekkkgsl ktlllpvntv qtklgsdlce palhgavvag
      421 svsllyklfl dsyckaenhl vcfhmlsrlf gclrlsdlqe agrsdtlfpv dwsmellale
      481 qllnlvlsnd iynvasdrir hkevqfgfyr klaqmllths qasipawfrc lkllmslnhl
      541 ivepdlddlv ssawidaeay dprtkkpqet listifqiys klrqfprlfe evltvicrpa
      601 vdelrpsifs agltaklrec llelppnqil dilclfvekc qtliipaveg svdialklms
      661 vcsvlhaflf nmrslddvtp spvvlrtqrl maniqegiiq plmellqapr reeekselwl
      721 rkasdaalll vytwvevdal fgvscskyms ptaetavtep aarhwgisaf lpgveeqcwr
      781 rvmelassfa stskyclell tlqkmkmmlm qtkadlqalh haaafilesg rstmsrgese
      841 pwdgdisvit elsyptahwh lvisnltill pylslkdvey ianvllqtlm taeaqeaatd
      901 qepsisiaki slglihssll pemrvlhcaf lthlihqfat vlptstrdsv dlplqqlsvt
      961 sipwheeila scktvdalen kvqkdelsls wktlekvaqc iallakngcp iilkerqlqr
     1021 clglleivsl lkldsflpsd ctrcflvlls llvntrasvs cskllllkvl stclhllrcl
     1081 qagrnsnsvl kvlhasdvle avmtsqltac kfftdvltvp vwaqyvqevq eflenflqmi
     1141 ierrqsvkln lekfmsflvs crpdtgaaks iewknwnpea eqllltaftt lchvvtlhlq
     1201 qlpekklhsv dvlcallepv vlqmvrtveh glqsntpnqp lpvafiasvs tllkadlshp
     1261 vkkdwqkeps gcwkqprvkl yqefysqilk elpcagsnlq flqlalqflt vfcsvpalyp
     1321 eketavmvvf aikkllsgpa itiqvirnme meltevlvqv lgncsaeefy aimrlvlqgl
     1381 evrniwqqka kevlsavslt klllscplsg dkgkafwfas pqiitalalq tkeacqdqal
     1441 isiivipile tvsallrqge gilvnphhvs lafsilltvp ldhlktedyh gvflgvhevl
     1501 fsivqchpkv llkaapsfls sfhrlvvsvm hegrqkgdrg nvdefemilk cahlvermyt
     1561 yiaaemedft vfsafivahy vtelqkvtlh pavkthlteg iyhildlcie rdikflnasl
     1621 pagvrqvfkd lyddynryhk akkqgeekyt a
//
LOCUS       XP_041324820            1535 aa            linear   VRT 06-MAY-2021
DEFINITION  unhealthy ribosome biogenesis protein 2 homolog isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324820
VERSION     XP_041324820.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468886.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1535
                     /product="unhealthy ribosome biogenesis protein 2 homolog
                     isoform X2"
                     /calculated_mol_wt=172793
     Region          1332..1528
                     /region_name="Urb2"
                     /note="Urb2/Npa2 family; pfam10441"
                     /db_xref="CDD:431289"
     CDS             1..1535
                     /gene="URB2"
                     /coded_by="XM_041468886.1:243..4850"
                     /db_xref="GeneID:121354337"
ORIGIN      
        1 maaiysgiyl klksaktswe dklklarfaw ishqcvlpnk eqvlldwvsq alvsnynkkh
       61 eledevvekl wayldnvihs krlqdllksg ktvglsfsia eiinkrlsea ysektqqnig
      121 tvlscsngil stpslsiiyt akcellvdll sklsklacqq lasddavgsq lfsvlqltfa
      181 qylliqrqqt npnrvfgrvt shllqpclll rhlltvrswt qaddnhvcqh lsreirsqie
      241 tllhaglfqp elfssykeel lseqesqekk kgslktlllp vntvqtklgs dlcepalhga
      301 vvagsvslly klfldsycka enhlvcfhml srlfgclrls dlqeagrsdt lfpvdwsmel
      361 laleqllnlv lsndiynvas drirhkevqf gfyrklaqml lthsqasipa wfrclkllms
      421 lnhlivepdl ddlvssawid aeaydprtkk pqetlistif qiysklrqfp rlfeevltvi
      481 crpavdelrp sifsagltak lrecllelpp nqildilclf vekcqtliip avegsvdial
      541 klmsvcsvlh aflfnmrsld dvtpspvvlr tqrlmaniqe giiqplmell qaprreeeks
      601 elwlrkasda alllvytwve vdalfgvscs kymsptaeta vtepaarhwg isaflpgvee
      661 qcwrrvmela ssfastskyc lelltlqkmk mmlmqtkadl qalhhaaafi lesgrstmsr
      721 gesepwdgdi svitelsypt ahwhlvisnl tillpylslk dveyianvll qtlmtaeaqe
      781 aatdqepsis iakislglih ssllpemrvl hcaflthlih qfatvlptst rdsvdlplqq
      841 lsvtsipwhe eilascktvd alenkvqkde lslswktlek vaqciallak ngcpiilker
      901 qlqrclglle ivsllkldsf lpsdctrcfl vllsllvntr asvscsklll lkvlstclhl
      961 lrclqagrns nsvlkvlhas dvleavmtsq ltackfftdv ltvpvwaqyv qevqeflenf
     1021 lqmiierrqs vklnlekfms flvscrpdtg aaksiewknw npeaeqlllt afttlchvvt
     1081 lhlqqlpekk lhsvdvlcal lepvvlqmvr tvehglqsnt pnqplpvafi asvstllkad
     1141 lshpvkkdwq kepsgcwkqp rvklyqefys qilkelpcag snlqflqlal qfltvfcsvp
     1201 alypeketav mvvfaikkll sgpaitiqvi rnmemeltev lvqvlgncsa eefyaimrlv
     1261 lqglevrniw qqkakevlsa vsltklllsc plsgdkgkaf wfaspqiita lalqtkeacq
     1321 dqalisiivi piletvsall rqgegilvnp hhvslafsil ltvpldhlkt edyhgvflgv
     1381 hevlfsivqc hpkvllkaap sflssfhrlv vsvmhegrqk gdrgnvdefe milkcahlve
     1441 rmytyiaaem edftvfsafi vahyvtelqk vtlhpavkth ltegiyhild lcierdikfl
     1501 naslpagvrq vfkdlyddyn ryhkakkqge ekyta
//
LOCUS       XP_041324831             589 aa            linear   VRT 06-MAY-2021
DEFINITION  TAF5-like RNA polymerase II p300/CBP-associated factor-associated
            factor 65 kDa subunit 5L [Pyrgilauda ruficollis].
ACCESSION   XP_041324831
VERSION     XP_041324831.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468897.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="TAF5-like RNA polymerase II p300/CBP-associated
                     factor-associated factor 65 kDa subunit 5L"
                     /calculated_mol_wt=66015
     Region          67..201
                     /region_name="TAF5_NTD2"
                     /note="TAF5_NTD2 is the second conserved N-terminal region
                     of TATA Binding Protein (TBP) Associated Factor 5 (TAF5),
                     involved in forming Transcription Factor IID (TFIID);
                     cd08044"
                     /db_xref="CDD:176269"
     Site            order(90..91,133,162..166,198)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:176269"
     Site            order(132,135..136)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176269"
     Region          <272..581
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          273..340
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          345..382
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          388..424
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          429..465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          472..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..589
                     /gene="TAF5L"
                     /coded_by="XM_041468897.1:203..1972"
                     /db_xref="GeneID:121354347"
ORIGIN      
        1 mkrvrteqiq mavscylkrr qyvdsegplk qglrlcqtae emaanltvqs esgcanvvsa
       61 apclaepqqy evqfgrlrnf ltdsdsqhsh evmpllyplf vylhlnmvqn glkstvdsfy
      121 srfhgmflqn asqkdiieql qttmtiqdil snlklrafld nkyvirlqed synyllrylq
      181 sdnnnalckv ltlhihldvq pakrtdyqly aggsssrnes nglepsdmpa silqneaald
      241 llqdsikrvk dgppslttic fyafynteql lntaeispns kllaagfdns cvklwslrsr
      301 klksephlvd vsrirlacdi ldeeeeeddn agtemkilrg hcgpvystrf lsdssgllsc
      361 sedmsirywd lgsftntvly qghaypvwdl dispcslyfa sgshdrtarl wsfdrtyplr
      421 iyaghladvd cikfhpnsny latgstdktv rlwstqqgns vrlftghrgp vlalafspng
      481 kylasagedq rlklwdlasg tlykelrght dnitsltfsp dssliasasm dnsvrvwdir
      541 ntycnapadg ssselvgvyt gqmnnvlsvq fmacnlllvt giaqenqeh
//
LOCUS       XP_041324838             589 aa            linear   VRT 06-MAY-2021
DEFINITION  TAF5-like RNA polymerase II p300/CBP-associated factor-associated
            factor 65 kDa subunit 5L [Pyrgilauda ruficollis].
ACCESSION   XP_041324838
VERSION     XP_041324838.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468904.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="TAF5-like RNA polymerase II p300/CBP-associated
                     factor-associated factor 65 kDa subunit 5L"
                     /calculated_mol_wt=66015
     Region          67..201
                     /region_name="TAF5_NTD2"
                     /note="TAF5_NTD2 is the second conserved N-terminal region
                     of TATA Binding Protein (TBP) Associated Factor 5 (TAF5),
                     involved in forming Transcription Factor IID (TFIID);
                     cd08044"
                     /db_xref="CDD:176269"
     Site            order(90..91,133,162..166,198)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:176269"
     Site            order(132,135..136)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176269"
     Region          <272..581
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          273..340
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          345..382
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          388..424
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          429..465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          472..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..589
                     /gene="TAF5L"
                     /coded_by="XM_041468904.1:189..1958"
                     /db_xref="GeneID:121354347"
ORIGIN      
        1 mkrvrteqiq mavscylkrr qyvdsegplk qglrlcqtae emaanltvqs esgcanvvsa
       61 apclaepqqy evqfgrlrnf ltdsdsqhsh evmpllyplf vylhlnmvqn glkstvdsfy
      121 srfhgmflqn asqkdiieql qttmtiqdil snlklrafld nkyvirlqed synyllrylq
      181 sdnnnalckv ltlhihldvq pakrtdyqly aggsssrnes nglepsdmpa silqneaald
      241 llqdsikrvk dgppslttic fyafynteql lntaeispns kllaagfdns cvklwslrsr
      301 klksephlvd vsrirlacdi ldeeeeeddn agtemkilrg hcgpvystrf lsdssgllsc
      361 sedmsirywd lgsftntvly qghaypvwdl dispcslyfa sgshdrtarl wsfdrtyplr
      421 iyaghladvd cikfhpnsny latgstdktv rlwstqqgns vrlftghrgp vlalafspng
      481 kylasagedq rlklwdlasg tlykelrght dnitsltfsp dssliasasm dnsvrvwdir
      541 ntycnapadg ssselvgvyt gqmnnvlsvq fmacnlllvt giaqenqeh
//
LOCUS       XP_041324851            1153 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear pore complex protein Nup133 [Pyrgilauda ruficollis].
ACCESSION   XP_041324851
VERSION     XP_041324851.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468917.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1153
                     /product="nuclear pore complex protein Nup133"
                     /calculated_mol_wt=128386
     Region          87..>383
                     /region_name="Nucleoporin_N"
                     /note="Nup133 N terminal like; pfam08801"
                     /db_xref="CDD:400932"
     Region          596..1128
                     /region_name="Nucleoporin_C"
                     /note="Non-repetitive/WGA-negative nucleoporin C-terminal;
                     pfam03177"
                     /db_xref="CDD:427181"
     CDS             1..1153
                     /gene="NUP133"
                     /coded_by="XM_041468917.1:65..3526"
                     /db_xref="GeneID:121354360"
ORIGIN      
        1 mfpsapvspr tpggsarrtl gsaapsplsr pggkkglpvv aaaaspvlfs paarrsgsls
       61 aratptrviq lptatetiny dvkafgsslp vkvmealkka daddhlsvqv desgwawlvh
      121 kerliiwkig qsavaklslc kelqlppsdf qwssslaais clnssgeaps lqslaimvat
      181 segsvrywpn lahegsytdt stdfggslcs fltavkggsf ilsssrgqlv rlipdssgki
      241 hqhalpqgqg mfsgigrkvs sflgilspgn davissvlwd rerssfymlt ssnlnkweid
      301 dsseryilsw dinrilkehi tdaiwgsesn yedikggvnt qymdlqqnrd glvilaaawh
      361 pgdrpclvyy tlitvedkgy qmsddvvvev tqynpsfqse devlcclvvp dyfshaayly
      421 kedevfacst gtgrislpqe kiifglqgds ilgagscnsl pvffakksgl ltilsrenis
      481 vlpedledal sssiagprse spafdatgrl eviaqedktk llkaaflqyc rkdvvnaqsm
      541 vielfpsnad lesdaeldra vtqisvdlmd dypasdprwa esvseeaagf sntslillhq
      601 ledktkahsf fieflhqvgv ferlgsfpvr gmpmatrlll cehaeklaaa ivlknhhsrl
      661 pelvnaaili alnkrecdvp asltpadvff revsqidsif eclleeeeqi lkdmpiesie
      721 waqivvnvnn iikdmlqvac qyrqsrasly ktgelperep eyipwtassg lrtaimrqhg
      781 tilkvvypqv dsnlrsvvae qlvalldcfl dgyvaqlksv drladqerys svemeyvqkr
      841 sellspllsl gqyqlaaala ekycdfdilv qiceqtdnqa rlqrymtqfa dqnfsdflfr
      901 wylekgkrgk llsqpiaqhg qlasflqahe hlswlhdins qdlqkahrtl qtlanmetry
      961 ftkkktllgl sklaalasdl sedilqekie eiseqerfll hqetlpeqll aekqlnlndm
     1021 pvlsasllid lficdenrra neydfkkald lleyideeee vdvndlklki lckalqrdgw
     1081 scsdgrddpi easkdsifvk ilqkllkegv qlseylpevk dllqanelgn lkynsyfefv
     1141 lkanyelyvq gqa
//
LOCUS       XP_041324866             311 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: sulfotransferase 6B1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324866
VERSION     XP_041324866.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468932.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="LOW QUALITY PROTEIN: sulfotransferase 6B1-like"
                     /calculated_mol_wt=35633
     Region          57..297
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..311
                     /gene="LOC121354366"
                     /coded_by="XM_041468932.1:1..936"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121354366"
ORIGIN      
        1 mtrnseriie lvdkcfsegd rmvpedmpfs yrgilypvti sspqtlealk sfearsddvi
       61 lagypkxgtn wleqmvkela dakyteeerk erinaekkle tfqrlefgdp gilkrmkqlp
      121 srrxgsnpsd llppsilqsk akilvlvqnp kdtavfyyhf cnnlpvmpsf apwdeyfadf
      181 mngklawgsy fdhlvewnky idnerimtis yeelkedpil gmkkiasffg fslceedfsr
      241 iarkisfksm kdkssethgk sgdilfhkgv vgnwrdifsk aqheemdwkf qdslggtkia
      301 akikydvyck a
//
LOCUS       XP_041324878             666 aa            linear   VRT 06-MAY-2021
DEFINITION  endoplasmic reticulum membrane-associated RNA degradation protein
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324878
VERSION     XP_041324878.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468944.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..666
                     /product="endoplasmic reticulum membrane-associated RNA
                     degradation protein"
                     /calculated_mol_wt=75988
     Region          131..212
                     /region_name="DUF4209"
                     /note="Domain of unknown function (DUF4209); pfam13910"
                     /db_xref="CDD:433574"
     CDS             1..666
                     /gene="ERMARD"
                     /coded_by="XM_041468944.1:1037..3037"
                     /db_xref="GeneID:121354374"
ORIGIN      
        1 malpdsvttc lsqpvryaic klgfekedty dinnilsgng evcwqavteh vcylesdqsv
       61 dyiksirslg pvcesvnsyf ksltkeqfvi qyvscfhwtn ctevfldvfd vlqstqatev
      121 alglmkltsc leralgdvyl lkgndcpfll rdllaseqla dvfgqavmnv lrvfigsphg
      181 lnlrnvlwhg fvspqeipak ycamllflta glgqllqayl lqtksvlvhr syvifislee
      241 ldafpdlnne ilsiaeelvk lsrfvlkiml pfwvaaltaf kqsryadsvi lllpqleagl
      301 rllftttnkc pnrlltaess alyttfdeml akhldneevn qlpvvleepa mdflwdflnh
      361 qegprirdrl shgeinletf preianqivg faitilcrfs dknmfslkeh mvikplmsca
      421 scyqsrfhpi srlkkqvlec mksiclwpel etvpeeqvqk ikglegnaea ntlillisei
      481 isqlqhympq nccssddpin gvlterllve lcdtrictly sprpvlevvv vlrkistqch
      541 qvsqqviaga glrytqwlnk tlrsrqrhny rrmlnsikfl spvlrlilll itlelvsvhs
      601 vckknpfdyq qylkflksvl qytenlvtyt spdknkwdet veltkktlik irkisdrklm
      661 lmhlat
//
LOCUS       XP_041324884             666 aa            linear   VRT 06-MAY-2021
DEFINITION  endoplasmic reticulum membrane-associated RNA degradation protein
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324884
VERSION     XP_041324884.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468950.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..666
                     /product="endoplasmic reticulum membrane-associated RNA
                     degradation protein"
                     /calculated_mol_wt=75988
     Region          131..212
                     /region_name="DUF4209"
                     /note="Domain of unknown function (DUF4209); pfam13910"
                     /db_xref="CDD:433574"
     CDS             1..666
                     /gene="ERMARD"
                     /coded_by="XM_041468950.1:107..2107"
                     /db_xref="GeneID:121354374"
ORIGIN      
        1 malpdsvttc lsqpvryaic klgfekedty dinnilsgng evcwqavteh vcylesdqsv
       61 dyiksirslg pvcesvnsyf ksltkeqfvi qyvscfhwtn ctevfldvfd vlqstqatev
      121 alglmkltsc leralgdvyl lkgndcpfll rdllaseqla dvfgqavmnv lrvfigsphg
      181 lnlrnvlwhg fvspqeipak ycamllflta glgqllqayl lqtksvlvhr syvifislee
      241 ldafpdlnne ilsiaeelvk lsrfvlkiml pfwvaaltaf kqsryadsvi lllpqleagl
      301 rllftttnkc pnrlltaess alyttfdeml akhldneevn qlpvvleepa mdflwdflnh
      361 qegprirdrl shgeinletf preianqivg faitilcrfs dknmfslkeh mvikplmsca
      421 scyqsrfhpi srlkkqvlec mksiclwpel etvpeeqvqk ikglegnaea ntlillisei
      481 isqlqhympq nccssddpin gvlterllve lcdtrictly sprpvlevvv vlrkistqch
      541 qvsqqviaga glrytqwlnk tlrsrqrhny rrmlnsikfl spvlrlilll itlelvsvhs
      601 vckknpfdyq qylkflksvl qytenlvtyt spdknkwdet veltkktlik irkisdrklm
      661 lmhlat
//
LOCUS       XP_041324900             490 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 10 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324900
VERSION     XP_041324900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="PHD finger protein 10 isoform X1"
                     /calculated_mol_wt=55521
     Region          67..153
                     /region_name="WH_NTD_PHF10"
                     /note="N-terminal winged helix DNA-binding domain found in
                     PHD finger protein 10 (PHF10) and similar proteins;
                     cd21085"
                     /db_xref="CDD:411035"
     Region          371..425
                     /region_name="PHD1_PHF10"
                     /note="PHD finger 1 found in PHD finger protein 10 (PHF10)
                     and similar proteins; cd15528"
                     /db_xref="CDD:277003"
     Site            order(371,389..393,397,420)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277003"
     Region          427..470
                     /region_name="PHD2_PHF10"
                     /note="PHD finger 2 found in PHD finger protein 10 (PHF10)
                     and similar proteins; cd15529"
                     /db_xref="CDD:277004"
     Site            order(427,439..443,447,465)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277004"
     CDS             1..490
                     /gene="PHF10"
                     /coded_by="XM_041468966.1:122..1594"
                     /db_xref="GeneID:121354382"
ORIGIN      
        1 mavvlsprlc dsdpatpgaq slkddteens ndgsqpskrr rmgsgdssrs cetssqdvgy
       61 syfpaenlie ykwppdetge yymlqeqvse ylgvtsfkrk yperrdlshk eklylrelnv
      121 itetqctlgl talrsdevid lmikeypakh aeysvilqek erqritdhyk eysqmqqqnt
      181 qkveaskvpe yikkaakkaa efnsnlnrer meerrayfdl qthiiqvpqg kykvlptert
      241 kvspypvali pgqfqeyykr yspdelrylp lntalyeppl dpelltldsd gdsddaeegr
      301 gdekrktkgn sdnssgnvse gdcatdnqed sfqgrqktrd ksatprkdgs krsvlpksvp
      361 gykpkvipna icgiclkgke snkkgkpeal ihcsqcdnsg hpscldmtpe lvtmiktypw
      421 qcmecktcii cgqphheeem mfcdvcdrgy htfcvgldai psgrwicdcc qkdppvprrg
      481 grrgknskeg
//
LOCUS       XP_041324909             438 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 10 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324909
VERSION     XP_041324909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..438
                     /product="PHD finger protein 10 isoform X2"
                     /calculated_mol_wt=49909
     Region          67..153
                     /region_name="WH_NTD_PHF10"
                     /note="N-terminal winged helix DNA-binding domain found in
                     PHD finger protein 10 (PHF10) and similar proteins;
                     cd21085"
                     /db_xref="CDD:411035"
     Region          319..373
                     /region_name="PHD1_PHF10"
                     /note="PHD finger 1 found in PHD finger protein 10 (PHF10)
                     and similar proteins; cd15528"
                     /db_xref="CDD:277003"
     Site            order(319,337..341,345,368)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277003"
     Region          375..418
                     /region_name="PHD2_PHF10"
                     /note="PHD finger 2 found in PHD finger protein 10 (PHF10)
                     and similar proteins; cd15529"
                     /db_xref="CDD:277004"
     Site            order(375,387..391,395,413)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277004"
     CDS             1..438
                     /gene="PHF10"
                     /coded_by="XM_041468975.1:122..1438"
                     /db_xref="GeneID:121354382"
ORIGIN      
        1 mavvlsprlc dsdpatpgaq slkddteens ndgsqpskrr rmgsgdssrs cetssqdvgy
       61 syfpaenlie ykwppdetge yymlqeqvse ylgvtsfkrk yperrdlshk eklylrelnv
      121 itetqctlgl talrsdevid lmikeypakh aeysvilqek erqritdhyk eysqmqqqnt
      181 qkveaskvpe yikkaakkaa efnsnlnrer meerrayfdl qthiiqvpqg kykvlptert
      241 kvspypvali pgqfqeyykr yspdelrylp lntalyeppl dpelltldsd gdsddaeegr
      301 gdekrktkgn spkvipnaic giclkgkesn kkgkpealih csqcdnsghp scldmtpelv
      361 tmiktypwqc mecktciicg qphheeemmf cdvcdrgyht fcvgldaips grwicdccqk
      421 dppvprrggr rgknskeg
//
LOCUS       XP_041324917             409 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 10 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324917
VERSION     XP_041324917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468983.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="PHD finger protein 10 isoform X3"
                     /calculated_mol_wt=46279
     Region          67..153
                     /region_name="WH_NTD_PHF10"
                     /note="N-terminal winged helix DNA-binding domain found in
                     PHD finger protein 10 (PHF10) and similar proteins;
                     cd21085"
                     /db_xref="CDD:411035"
     Region          371..>400
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(371,390..393,397)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..409
                     /gene="PHF10"
                     /coded_by="XM_041468983.1:122..1351"
                     /db_xref="GeneID:121354382"
ORIGIN      
        1 mavvlsprlc dsdpatpgaq slkddteens ndgsqpskrr rmgsgdssrs cetssqdvgy
       61 syfpaenlie ykwppdetge yymlqeqvse ylgvtsfkrk yperrdlshk eklylrelnv
      121 itetqctlgl talrsdevid lmikeypakh aeysvilqek erqritdhyk eysqmqqqnt
      181 qkveaskvpe yikkaakkaa efnsnlnrer meerrayfdl qthiiqvpqg kykvlptert
      241 kvspypvali pgqfqeyykr yspdelrylp lntalyeppl dpelltldsd gdsddaeegr
      301 gdekrktkgn sdnssgnvse gdcatdnqed sfqgrqktrd ksatprkdgs krsvlpksvp
      361 gykpkvipna icgiclkgke snkkgkpeal ihcsqcdnsg ikviilvli
//
LOCUS       XP_041324929             185 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0669 protein C6orf120 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324929
VERSION     XP_041324929.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468995.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="UPF0669 protein C6orf120 homolog"
                     /calculated_mol_wt=21226
     Region          1..171
                     /region_name="UPF0669"
                     /note="Putative cytokine, C6ORF120; pfam17065"
                     /db_xref="CDD:293670"
     CDS             1..185
                     /gene="CUNH6orf120"
                     /coded_by="XM_041468995.1:271..828"
                     /db_xref="GeneID:121354397"
ORIGIN      
        1 mathwrrilt vfvtaqvlfv vnafeeedvp eewillhvvq gqigagnysy lrlnhegkiv
       61 lqmrslkgda dlyvsdvtlh psfdeyelqs vtcgqdivhv pahfrrpvgi giyghpshle
      121 sefemkvyyd rtvvqypfge asynpeemea nqkysqsted esqdeesvfw tiligilkli
      181 leilf
//
LOCUS       XP_041324938             185 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0669 protein C6orf120 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324938
VERSION     XP_041324938.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469004.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="UPF0669 protein C6orf120 homolog"
                     /calculated_mol_wt=21226
     Region          1..171
                     /region_name="UPF0669"
                     /note="Putative cytokine, C6ORF120; pfam17065"
                     /db_xref="CDD:293670"
     CDS             1..185
                     /gene="CUNH6orf120"
                     /coded_by="XM_041469004.1:170..727"
                     /db_xref="GeneID:121354397"
ORIGIN      
        1 mathwrrilt vfvtaqvlfv vnafeeedvp eewillhvvq gqigagnysy lrlnhegkiv
       61 lqmrslkgda dlyvsdvtlh psfdeyelqs vtcgqdivhv pahfrrpvgi giyghpshle
      121 sefemkvyyd rtvvqypfge asynpeemea nqkysqsted esqdeesvfw tiligilkli
      181 leilf
//
LOCUS       XP_041324952             151 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein light chain Tctex-type protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324952
VERSION     XP_041324952.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469018.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..151
                     /product="dynein light chain Tctex-type protein 2"
                     /calculated_mol_wt=16687
     Region          38..149
                     /region_name="DLC-like_SF"
                     /note="dynein light chain (DLC)-like domain superfamily;
                     cl41776"
                     /db_xref="CDD:425407"
     CDS             1..151
                     /gene="DYNLT2"
                     /coded_by="XM_041469018.1:157..612"
                     /db_xref="GeneID:121354406"
ORIGIN      
        1 meggkkrqdk dtskgkkapq dasgtapteg kakpknrnty rleprtkvqd gllrdkaqai
       61 ltnklqeaty dgasspflca svseeilnav keldydryky vvsvliveka nqamivasrc
      121 lwdaqrdtwv sakcetdtfi alalvmacyy d
//
LOCUS       XP_041324965            1180 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324965
VERSION     XP_041324965.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469031.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1180
                     /product="thrombospondin-2"
                     /calculated_mol_wt=131770
     Region          37..225
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          328..382
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     Region          393..438
                     /region_name="TSP_1"
                     /note="Thrombospondin type 1 domain; pfam00090"
                     /db_xref="CDD:459668"
     Region          448..500
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          505..557
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          660..699
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          701..736
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          737..772
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          774..795
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          797..831
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          797..831
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          832..854
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          855..892
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          855..892
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          893..928
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          929..959
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          982..1179
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..1180
                     /gene="THBS2"
                     /coded_by="XM_041469031.1:250..3792"
                     /db_xref="GeneID:121354412"
ORIGIN      
        1 mpevmlkrrg llwlavlltv wvssnaqdgd keeettfdll qvsninrkti gakvfrgpdp
       61 tmpayrfirf dhippckpek lkkilklirq negfilsatl rqdrqsrgtv lalegpgise
      121 rqfeiisngr antldliywv dgfqnvisle dvdladsqwk nltvqitgen ynlyvgcdli
      181 dsfileepfy ehlkaessrl yvakgssren hfrgllqniq lifdtsvedv lrkkgcqrsq
      241 stevntines teilhlspav tieyvgekpk aefcdrscee lgsmfteltg lrivvnnlad
      301 nlqkvseenq imweligpnk tmknqpvcwq dgrvfadnen wivdsctkci cqdskivcnq
      361 itcpavscad pvfvegeccp vcshsddsee gwspwsdwtk csvtcgsgtq mrgrscdvtr
      421 sactgphiqt rmcsfkkcdh rirqdggwsh wspwsscsvt cgvgnitrir lcnspipqmg
      481 gkncvgngre tekcekvpcp vngqwgpwsp wsactvtcgg girersrlcn spepqyggkl
      541 cvgdikqhdm cnkkdcpidg clsnpcfpga ecnsypdgsw scgacpagyl gngtfcedld
      601 eciavsdvcf kvnqvhrcvn tnpgfhclpc pprykgsqpy gvglevakte kqvcepenpc
      661 kdkthschks aeciylghfs dpmykcecrt gyagdghicg edsdldgwpn nnlvcaanat
      721 yhcvkdncpl lpnsgqedfd kdgkgdacde dddndgvedd kdncpllfnp rqfdydkdev
      781 gdrcdncpyv hnpaqidtdn ngegdscavd idgddifner dncpyvyntd qsdtdgdgvg
      841 dqcdncplmh npdqtdadnd lvgdqcdnne didedghqnn qdncpyipna nqadhdqdgk
      901 gdacdpdddn dgvpddrdnc rlrynpeqed sdgdgrgdic kddfdndnvp diydvcpenn
      961 aisetdfrkf qmvpldpkgt aqidpnwvir hqgkelvqta nsdpgiavgy defssvdfsg
     1021 tfyvntdrdd dyagfvfgyq sssrfyvlmw kqvtqtywed kptraygysg vslkvvnstt
     1081 gtgehlrnal whtgntpgqv rtlwhdpkni gwkdytayrw hlihrpktgl ikvlvyegkq
     1141 vmvdsgpiyd ttfaggrlgl fvfsqemvyf sdlkyecrda
//
LOCUS       XP_041324976             454 aa            linear   VRT 06-MAY-2021
DEFINITION  SPARC-related modular calcium-binding protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324976
VERSION     XP_041324976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="SPARC-related modular calcium-binding protein 2
                     isoform X1"
                     /calculated_mol_wt=50642
     Region          50..81
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          87..150
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(91,105,123,127)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          151..211
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          213..278
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(217,232,250,254)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          301..414
                     /region_name="EFh_SPARC_SMOC2"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 2
                     (SMOC-2); cd16241"
                     /db_xref="CDD:320020"
     Region          345..377
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     Site            order(357,359,361,368,394,396,398,405)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320020"
     Region          382..414
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     CDS             1..454
                     /gene="SMOC2"
                     /coded_by="XM_041469042.1:510..1874"
                     /db_xref="GeneID:121354419"
ORIGIN      
        1 mwvplllllt ellpavpaqk lsaltflrvd qdkdrecsld cagspqkslc asdgrtflsr
       61 cefqrakckd pqleiayrgn ckdvsrcvae rkytqeqark efqqvfipec nddgtysqvq
      121 chsytgycwc vtpngrpisg tavahktphc pgsvseklpq regtgktdda sapaletqpq
      181 gdeediasrf ptlwteqvks rqnktnkssa sscdqelqsa leeakqpqkd nvfipdcaqg
      241 glykpvqchp stgycwcvlv dtgrpipgts tryeqpkcdn garahptktk dlykgrqlqg
      301 cpgakknefl tsvldalstd mvhavsdpsl sssrvsepdp nhtleervvh wyfkqldkns
      361 sgdigkkeik pfkrflrkks kpkkcvkkfv eycdvnndks lsvqelmgcl gvtkeegkae
      421 tkkrhmvprt nnmestsssr qvfptnylhl nkta
//
LOCUS       XP_041324985             448 aa            linear   VRT 06-MAY-2021
DEFINITION  SPARC-related modular calcium-binding protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324985
VERSION     XP_041324985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469051.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="SPARC-related modular calcium-binding protein 2
                     isoform X2"
                     /calculated_mol_wt=49898
     Region          50..81
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          87..150
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(91,105,123,127)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          151..211
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          213..278
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(217,232,250,254)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          301..414
                     /region_name="EFh_SPARC_SMOC2"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 2
                     (SMOC-2); cd16241"
                     /db_xref="CDD:320020"
     Region          345..377
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     Site            order(357,359,361,368,394,396,398,405)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320020"
     Region          382..414
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     CDS             1..448
                     /gene="SMOC2"
                     /coded_by="XM_041469051.1:510..1856"
                     /db_xref="GeneID:121354419"
ORIGIN      
        1 mwvplllllt ellpavpaqk lsaltflrvd qdkdrecsld cagspqkslc asdgrtflsr
       61 cefqrakckd pqleiayrgn ckdvsrcvae rkytqeqark efqqvfipec nddgtysqvq
      121 chsytgycwc vtpngrpisg tavahktphc pgsvseklpq regtgktdda sapaletqpq
      181 gdeediasrf ptlwteqvks rqnktnkssa sscdqelqsa leeakqpqkd nvfipdcaqg
      241 glykpvqchp stgycwcvlv dtgrpipgts tryeqpkcdn garahptktk dlykgrqlqg
      301 cpgakknefl tsvldalstd mvhavsdpsl sssrvsepdp nhtleervvh wyfkqldkns
      361 sgdigkkeik pfkrflrkks kpkkcvkkfv eycdvnndks lsvqelmgcl gvtkeegkae
      421 tkkrhmvprt nnmestsssr qqvskkqg
//
LOCUS       XP_041324995             448 aa            linear   VRT 06-MAY-2021
DEFINITION  SPARC-related modular calcium-binding protein 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324995
VERSION     XP_041324995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="SPARC-related modular calcium-binding protein 2
                     isoform X3"
                     /calculated_mol_wt=50010
     Region          50..81
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          87..150
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(91,105,123,127)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          151..211
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          213..278
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(217,232,250,254)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          301..414
                     /region_name="EFh_SPARC_SMOC2"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 2
                     (SMOC-2); cd16241"
                     /db_xref="CDD:320020"
     Region          345..377
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     Site            order(357,359,361,368,394,396,398,405)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320020"
     Region          382..414
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     CDS             1..448
                     /gene="SMOC2"
                     /coded_by="XM_041469061.1:510..1856"
                     /db_xref="GeneID:121354419"
ORIGIN      
        1 mwvplllllt ellpavpaqk lsaltflrvd qdkdrecsld cagspqkslc asdgrtflsr
       61 cefqrakckd pqleiayrgn ckdvsrcvae rkytqeqark efqqvfipec nddgtysqvq
      121 chsytgycwc vtpngrpisg tavahktphc pgsvseklpq regtgktdda sapaletqpq
      181 gdeediasrf ptlwteqvks rqnktnkssa sscdqelqsa leeakqpqkd nvfipdcaqg
      241 glykpvqchp stgycwcvlv dtgrpipgts tryeqpkcdn garahptktk dlykgrqlqg
      301 cpgakknefl tsvldalstd mvhavsdpsl sssrvsepdp nhtleervvh wyfkqldkns
      361 sgdigkkeik pfkrflrkks kpkkcvkkfv eycdvnndks lsvqelmgcl gvtkeegkae
      421 tkkrhmvprt nnmestsssr qcffhmcv
//
LOCUS       XP_041325003             445 aa            linear   VRT 06-MAY-2021
DEFINITION  SPARC-related modular calcium-binding protein 2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325003
VERSION     XP_041325003.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469069.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="SPARC-related modular calcium-binding protein 2
                     isoform X4"
                     /calculated_mol_wt=49573
     Region          50..81
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          87..150
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(91,105,123,127)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          151..211
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          213..278
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(217,232,250,254)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          301..414
                     /region_name="EFh_SPARC_SMOC2"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 2
                     (SMOC-2); cd16241"
                     /db_xref="CDD:320020"
     Region          345..377
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     Site            order(357,359,361,368,394,396,398,405)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320020"
     Region          382..414
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     CDS             1..445
                     /gene="SMOC2"
                     /coded_by="XM_041469069.1:510..1847"
                     /db_xref="GeneID:121354419"
ORIGIN      
        1 mwvplllllt ellpavpaqk lsaltflrvd qdkdrecsld cagspqkslc asdgrtflsr
       61 cefqrakckd pqleiayrgn ckdvsrcvae rkytqeqark efqqvfipec nddgtysqvq
      121 chsytgycwc vtpngrpisg tavahktphc pgsvseklpq regtgktdda sapaletqpq
      181 gdeediasrf ptlwteqvks rqnktnkssa sscdqelqsa leeakqpqkd nvfipdcaqg
      241 glykpvqchp stgycwcvlv dtgrpipgts tryeqpkcdn garahptktk dlykgrqlqg
      301 cpgakknefl tsvldalstd mvhavsdpsl sssrvsepdp nhtleervvh wyfkqldkns
      361 sgdigkkeik pfkrflrkks kpkkcvkkfv eycdvnndks lsvqelmgcl gvtkeevvpr
      421 tnnmestsss rqvfptnylh lnkta
//
LOCUS       XP_041325011             439 aa            linear   VRT 06-MAY-2021
DEFINITION  SPARC-related modular calcium-binding protein 2 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325011
VERSION     XP_041325011.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469077.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..439
                     /product="SPARC-related modular calcium-binding protein 2
                     isoform X5"
                     /calculated_mol_wt=48829
     Region          50..81
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          87..150
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(91,105,123,127)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          151..211
                     /region_name="Thyroglob_assoc"
                     /note="Thyroglobulin_1 repeat associated disordered
                     domain; pfam16597"
                     /db_xref="CDD:435450"
     Region          213..278
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(217,232,250,254)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     Region          301..414
                     /region_name="EFh_SPARC_SMOC2"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted modular calcium-binding protein 2
                     (SMOC-2); cd16241"
                     /db_xref="CDD:320020"
     Region          345..377
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     Site            order(357,359,361,368,394,396,398,405)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320020"
     Region          382..414
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320020"
     CDS             1..439
                     /gene="SMOC2"
                     /coded_by="XM_041469077.1:510..1829"
                     /db_xref="GeneID:121354419"
ORIGIN      
        1 mwvplllllt ellpavpaqk lsaltflrvd qdkdrecsld cagspqkslc asdgrtflsr
       61 cefqrakckd pqleiayrgn ckdvsrcvae rkytqeqark efqqvfipec nddgtysqvq
      121 chsytgycwc vtpngrpisg tavahktphc pgsvseklpq regtgktdda sapaletqpq
      181 gdeediasrf ptlwteqvks rqnktnkssa sscdqelqsa leeakqpqkd nvfipdcaqg
      241 glykpvqchp stgycwcvlv dtgrpipgts tryeqpkcdn garahptktk dlykgrqlqg
      301 cpgakknefl tsvldalstd mvhavsdpsl sssrvsepdp nhtleervvh wyfkqldkns
      361 sgdigkkeik pfkrflrkks kpkkcvkkfv eycdvnndks lsvqelmgcl gvtkeevvpr
      421 tnnmestsss rqqvskkqg
//
LOCUS       XP_041325026             137 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM89A [Pyrgilauda ruficollis].
ACCESSION   XP_041325026
VERSION     XP_041325026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="protein FAM89A"
                     /calculated_mol_wt=14395
     CDS             1..137
                     /gene="FAM89A"
                     /coded_by="XM_041469092.1:309..722"
                     /db_xref="GeneID:121354441"
ORIGIN      
        1 msgpglpgpg ggaglpplpk slsgllnsss sgggggqggr wrdlerlyaq ksriqdelsg
       61 ggrgsprppk ppnldaalal lrkemvglrq ldmsllcqly slyesiqeyk gacqadsnad
      121 csyalengff deeeeyf
//
LOCUS       XP_041325040             681 aa            linear   VRT 06-MAY-2021
DEFINITION  constitutive coactivator of peroxisome proliferator-activated
            receptor gamma [Pyrgilauda ruficollis].
ACCESSION   XP_041325040
VERSION     XP_041325040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..681
                     /product="constitutive coactivator of peroxisome
                     proliferator-activated receptor gamma"
                     /calculated_mol_wt=77266
     Region          5..213
                     /region_name="PIN_FAM120B-like"
                     /note="FEN-like PIN domains of FAM120B (family with
                     sequence similarity 120B) and related proteins; cd18672"
                     /db_xref="CDD:350239"
     Site            order(96..104,126..134)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350239"
     CDS             1..681
                     /gene="FAM120B"
                     /coded_by="XM_041469106.1:366..2411"
                     /db_xref="GeneID:121354448"
ORIGIN      
        1 mgvrglqgfv arvcpdacqt vdlremaekh rfdhpdcppv ivvdamscvr rwytpeswvc
       61 ggqwreylai ledfinafma agiklvfyfd gvveekkrde wikrrmknte eiarlfqfik
      121 thrkqpgrem fvlpsalptf tryalkslgq ktvctlqead fevaayglqh ncigilgqds
      181 dyliyntcpy fsienlhldr lvtvmysrev lchvlgisla hlplfacllg ndvvpesmle
      241 gfwhkcltts phrnnsynrr tnillsvany iskipcsyss vkhleeilpl gsdktllcrg
      301 vnsyllpgqq spwvppnetn crmlslqqqs alcqdkeifq lakeqhiqse nysifnilsh
      361 geiecsnsle ddydteipgq aliyrparqh iysillesgk ggtyplvkew fvyfgnplkq
      421 pdliqpvqps vtggtpnlkt lwlakgpdve kqrystflac fhlqdgmeel qaleapvagf
      481 ccllaylmmq vsslsledln aflalilclk gksaaqltgl qlaqvdsrav hlgavlirgl
      541 ttllmansac gfpfrmddlm pwavfdgklf qekyqkahrg csveellegn eslytpfqnl
      601 kslickvcma knrtiqsrpr gngfntgreq rdfnprlqqp hrshfvspyh nqmrgftqrh
      661 lqsqgrgsgh phgrryhlpp r
//
LOCUS       XP_041325049             681 aa            linear   VRT 06-MAY-2021
DEFINITION  constitutive coactivator of peroxisome proliferator-activated
            receptor gamma [Pyrgilauda ruficollis].
ACCESSION   XP_041325049
VERSION     XP_041325049.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469115.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508213.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..681
                     /product="constitutive coactivator of peroxisome
                     proliferator-activated receptor gamma"
                     /calculated_mol_wt=77266
     Region          5..213
                     /region_name="PIN_FAM120B-like"
                     /note="FEN-like PIN domains of FAM120B (family with
                     sequence similarity 120B) and related proteins; cd18672"
                     /db_xref="CDD:350239"
     Site            order(96..104,126..134)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350239"
     CDS             1..681
                     /gene="FAM120B"
                     /coded_by="XM_041469115.1:42..2087"
                     /db_xref="GeneID:121354448"
ORIGIN      
        1 mgvrglqgfv arvcpdacqt vdlremaekh rfdhpdcppv ivvdamscvr rwytpeswvc
       61 ggqwreylai ledfinafma agiklvfyfd gvveekkrde wikrrmknte eiarlfqfik
      121 thrkqpgrem fvlpsalptf tryalkslgq ktvctlqead fevaayglqh ncigilgqds
      181 dyliyntcpy fsienlhldr lvtvmysrev lchvlgisla hlplfacllg ndvvpesmle
      241 gfwhkcltts phrnnsynrr tnillsvany iskipcsyss vkhleeilpl gsdktllcrg
      301 vnsyllpgqq spwvppnetn crmlslqqqs alcqdkeifq lakeqhiqse nysifnilsh
      361 geiecsnsle ddydteipgq aliyrparqh iysillesgk ggtyplvkew fvyfgnplkq
      421 pdliqpvqps vtggtpnlkt lwlakgpdve kqrystflac fhlqdgmeel qaleapvagf
      481 ccllaylmmq vsslsledln aflalilclk gksaaqltgl qlaqvdsrav hlgavlirgl
      541 ttllmansac gfpfrmddlm pwavfdgklf qekyqkahrg csveellegn eslytpfqnl
      601 kslickvcma knrtiqsrpr gngfntgreq rdfnprlqqp hrshfvspyh nqmrgftqrh
      661 lqsqgrgsgh phgrryhlpp r
//
LOCUS       XP_041325082             295 aa            linear   VRT 06-MAY-2021
DEFINITION  hsp90 co-chaperone Cdc37-like 1, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325082
VERSION     XP_041325082.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469148.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508214.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..295
                     /product="hsp90 co-chaperone Cdc37-like 1"
     Region          <34..102
                     /region_name="CDC37_N"
                     /note="Cdc37 N terminal kinase binding; cl03951"
                     /db_xref="CDD:446243"
     Region          108..243
                     /region_name="CDC37_M"
                     /note="Cdc37 Hsp90 binding domain; smart01070"
                     /db_xref="CDD:215010"
     CDS             1..295
                     /gene="LOC121354476"
                     /coded_by="XM_041469148.1:<1..888"
                     /db_xref="GeneID:121354476"
ORIGIN      
        1 hvlfstqnyd qgielicqkq eefvkssies kwnlaeaqqk lgslalhnse smdqeyakaq
       61 teaselrqre eewkrkeaal iererqnlwn tdsfskevfn ksfiskytrk ededisksfi
      121 qkheqkiryf gmlgrwddsq rflsdhpylv ceetakylil wcfhleaeqk ralmeqiahq
      181 alvmqfiiem arscnvdprg cfrlffqkak ageegyleaf kteleafksr vricsqsqgf
      241 qamsvenssv ytgivegles lsqnandlqg cinrsvcnln smlqkdeevk mmdtv
//
LOCUS       XP_041325106             294 aa            linear   VRT 06-MAY-2021
DEFINITION  5'-3' exonuclease PLD3-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325106
VERSION     XP_041325106.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469172.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508247.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..294
                     /product="5'-3' exonuclease PLD3-like"
     Region          21..284
                     /region_name="PHA02820"
                     /note="phospholipase-D-like protein; Provisional"
                     /db_xref="CDD:222934"
     CDS             1..294
                     /gene="LOC121354491"
                     /coded_by="XM_041469172.1:<1..887"
                     /codon_start=3
                     /db_xref="GeneID:121354491"
ORIGIN      
        1 ifahfspfsp hfprspsrpq gerilaelqr lpargvavrv avsapspaap lddlralers
       61 gaavravdlp rltggvlhtk fwlvdgvhly igsanmdwra ltqvkelgaa iyncsclakd
      121 lgkifeayws lgvpdasipa pwpdnfstsi nlqtplettl ndtaaavyfs vgvtaglwgs
      181 pgvsgesprg gdnppcpqrl flvpasaaqs ripfarvsht kymvtdkaay vgtsnwsgdy
      241 fertagsalv vaqpgpgagt frerlrdlfe rdwssrysvd igdtegwagr cgpr
//
LOCUS       XP_041325118             475 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich protein 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325118
VERSION     XP_041325118.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469184.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508269.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="proline-rich protein 2-like"
                     /calculated_mol_wt=47825
     Region          <192..474
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..475
                     /gene="LOC121354499"
                     /coded_by="XM_041469184.1:1..1428"
                     /db_xref="GeneID:121354499"
ORIGIN      
        1 mrrdtggprr ghgvtragrr aptagargvp keagaaargh qgtpgdirgq redkhrrpsr
       61 rplpvqalar nppvapaqsg rgagraarge rgapgapgtg gtgstggtgh gvcgqghtrv
      121 rwrvpgactr vcgagaeaar saagrrprrn rppkpprkag ekgngggggg aaatpggggp
      181 ptapggtpga srdseeggtd pcgtpepqpp scalsgkrpl flppppkngm aapppstpgt
      241 rrprsrcprg frprslpaal rrvpplpprs gaavppvpav pgtpkprgtg gpvpalplra
      301 prrpgarirs aprqnreppr taephrdgsp apapsrspqp plpreapgva pppvtphfgg
      361 aaaergqrqs appratvtvt pqgpagdsds rrsrgsldar prpprglpkp crdprdqppv
      421 lpgtpgnpsg pprppgttet pgnppgppgt pqdsperpgp pghpetpaqa pppts
//
LOCUS       XP_041325131             183 aa            linear   VRT 06-MAY-2021
DEFINITION  growth arrest and DNA damage-inducible proteins-interacting protein
            1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325131
VERSION     XP_041325131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469197.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508269.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="growth arrest and DNA damage-inducible
                     proteins-interacting protein 1"
                     /calculated_mol_wt=20692
     Region          28..>125
                     /region_name="CR6_interact"
                     /note="Growth arrest and DNA-damage-inducible
                     proteins-interacting protein 1; pfam10147"
                     /db_xref="CDD:431088"
     CDS             1..183
                     /gene="GADD45GIP1"
                     /coded_by="XM_041469197.1:21..572"
                     /db_xref="GeneID:121354507"
ORIGIN      
        1 maaplrrall algparsrlp epvpvptrly radplrrrpg papadpgdlr aaarrfgrlg
       61 eaagvpvwrl wpspeqlrea eaeerewdpp lreveavldq rereeerrrk ereerqarsl
      121 aamparvaew rreraaarer pallrattdp rdpqprhplt prtpapgpla qltperdphp
      181 gtl
//
LOCUS       XP_041325140             155 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear factor 1 X-type-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325140
VERSION     XP_041325140.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469206.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508269.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>155
                     /product="nuclear factor 1 X-type-like"
     Region          20..121
                     /region_name="MH1"
                     /note="N-terminal Mad Homology 1 (MH1) domain; cl00055"
                     /db_xref="CDD:469592"
     CDS             1..155
                     /gene="LOC121354514"
                     /coded_by="XM_041469206.1:137..>601"
                     /db_xref="GeneID:121354514"
ORIGIN      
        1 mskeeeravk dellgekpev kqkwasrlla klrkdirpec redfvlsvtg kkapccvlsn
       61 pdqkgkirri dclrqadkvw rldlvmvilf kgvplestdg erlakapqca spglcvqphh
      121 igvtikeldl ylayfvhapg errvfpetpp trgtp
//
LOCUS       XP_041325152             694 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: lysine-specific demethylase 6B-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325152
VERSION     XP_041325152.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469218.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508291.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..694
                     /product="LOW QUALITY PROTEIN: lysine-specific demethylase
                     6B-like"
     Region          428..536
                     /region_name="JmjC"
                     /note="JmjC domain, hydroxylase; pfam02373"
                     /db_xref="CDD:396791"
     CDS             1..694
                     /gene="LOC121354525"
                     /coded_by="XM_041469218.1:<1..2085"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121354525"
ORIGIN      
        1 lavpppgrse sealeeisra cetlaeqagr psppspdtpp klglgggrrh rrppsrhrdl
       61 rrgpprrrhp rkeereqqqq qqqqqqreqq qrdrpvlatl dlqspgvqek ggppprletk
      121 ggappnnnpp apaapagppp afvssadllk lrslgegppk elkirlikve sgaggpggip
      181 glggtpagda laasevaepr glplaqltir hsaaevvras kwwravigpc vgcrsligcr
      241 csqleskrda fspvllqfct dpknpitvir glagslrlnl glfstktlve asgehavevr
      301 tqvqqpsdqn wdlsgtrqvw pcessrshtt iakyaqyqas sfqeslqedk dsedeeaeep
      361 dsttetppsp pdqkshqiik fgtnidlsda krxtagtlrg qggyiqhtst gnmlshvght
      421 ilgmntvqly mkvpgshtpg hqennnfcsv ninigpgdce wfavhehywe tisafcdrhg
      481 vdyltgswwp iledlyrsni pvyrfvqrpg dlvwinagtv hwvqatgwcn niawnvgplt
      541 ayqyqlaler yewnevknvk sivpmihvsw nvartvkisd pdlykmikyc llqsikhcqv
      601 qreslvragk kiayqgrvkd epayycnecd vevfnilfvt setggrntyl vhcegcarrr
      661 ggglagvivl eqykteelmq iydgftlvtp ptpr
//
LOCUS       XP_041325175             419 aa            linear   VRT 06-MAY-2021
DEFINITION  chondrolectin [Pyrgilauda ruficollis].
ACCESSION   XP_041325175
VERSION     XP_041325175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469241.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508324.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="chondrolectin"
                     /calculated_mol_wt=45077
     Region          158..311
                     /region_name="CLECT_chondrolectin_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in the human type-1A transmembrane proteins chondrolectin
                     (CHODL) and layilin; cd03595"
                     /db_xref="CDD:153065"
     Site            order(273,277,279,295,297..300,303..305)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153065"
     CDS             1..419
                     /gene="CHODL"
                     /coded_by="XM_041469241.1:1..1260"
                     /db_xref="GeneID:121354542"
ORIGIN      
        1 mgaggglgla avlaaavlcg pgalagrvls gecavrgrag aqrsgsgagr ardrarsadh
       61 psidgerwer lpgaraprrs gdaagnagae hpgglrapaa apspvlpspv lpslscpvfp
      121 elvhcrrsps psnrfkkier lpedglcagf cwqldsgqkv cygafkhscy klayfqdlsr
      181 rvgfqearqa ceidggalls leseaeqqli enmlqnltrs gsgisdgdfw iglwrsgdgl
      241 atssacpdly qwadgsmspf rnwytdepsc gseacvvmyh qptanpglgg pylyqwnddr
      301 cnmkhnfick yapdnvleke lgdrtepeyd ifptvpagnp ydtskpedqy hiiatetgii
      361 pnliyvvipt ipllllilva fgtccfqmlh kskgrtktsp nqstlwiskt prkdssmev
//
LOCUS       XP_041325189            1041 aa            linear   VRT 06-MAY-2021
DEFINITION  enteropeptidase [Pyrgilauda ruficollis].
ACCESSION   XP_041325189
VERSION     XP_041325189.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469255.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508324.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1041
                     /product="enteropeptidase"
                     /calculated_mol_wt=115730
     Region          58..149
                     /region_name="SEA"
                     /note="SEA domain; pfam01390"
                     /db_xref="CDD:460188"
     Region          215..240
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(226,229,233,239..240)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            236..240
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          249..357
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(259,261,263,290,295,328,352,354,356..357)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          371..526
                     /region_name="MAM"
                     /note="MAM domain, meprin/A5/mu; pfam00629"
                     /db_xref="CDD:459878"
     Region          549..656
                     /region_name="CUB"
                     /note="CUB domain; pfam00431"
                     /db_xref="CDD:395345"
     Site            order(559,561,563,590,595,629,653,655,657..658)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          665..699
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(670,678,689..690)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(682,685,689,695..696)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            692..696
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          700..>761
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          807..1039
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            807
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(847,898,993)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(987,1012,1014)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..1041
                     /gene="TMPRSS15"
                     /coded_by="XM_041469255.1:1..3126"
                     /db_xref="GeneID:121354546"
ORIGIN      
        1 mkakklsdek yvslssyeif ftsllaifvc vsvglivlsw lsiqelerae advnthgymg
       61 ilkivsgtsf tstlqnsssv dfkvlafdve kliqnifqes dlkykferce isqfkksedd
      121 hgrltsetgv vviltlyftq mvtaekikne lvlgviannp nptkalkidv nsiqitvaaa
      181 npttaiplts sgsgqlttsk ssttvaecll paelcadgat cisedffcdg vlncpdgsde
      241 sekrcaavcd gkfmltgssg ffhsmnypep ynenifcqwi ivvpqglsik lnfssfetqp
      301 yadelsifeg lgqnkvlras lsgtkletiy ifsheataqf msdysenyng fnatytafna
      361 selnnyekin ctfedgfcfw iqdldddsdw drvhgptfpl mtgpdfdhtf gnlsgfyist
      421 piglglieer vrilslplvp seayclsfwy fmygdnvyrl rvsisdergq ekiifekegn
      481 ygnnwnygqv tlnetsdfkv ifdafkrrgp sdialddtgl tkgkcnedny veptvrptaa
      541 ttplvptdcg gpvelwepnn tfssanfpnn ypnlafcmwy lnaengkniq lhfqffdlen
      601 indvveirdg rgpdslllav ytgkgplpdi fsttnqmtvi lqtdksstgk gflanfttgy
      661 hlrackvdeh qcgsgkcipl hnlcdhvpqc edgsdeakcm rllngslste glvqarvgkm
      721 whlacaddws gdisdrvcql lglgaanmss pvlftgdgpf vtitkggdhs liftkrehcw
      781 dnlvvhlqcn iqscgkhlvt qnnetrivgg ndarreawpw ivslrfnlrp vcgaslvsde
      841 wlvtaahcvy grqlkpfrwq aalglysqse leqpptvvrn idrivinphy skqtkdsdia
      901 lmhlqhkvqy tdyiqpiclp eknqqflpgi ncsiagwgdi rnegpssnil qeaevpllsn
      961 ekcqqwmpky nitenmlcag ydmggidscq gdsggpltfk dgdkwflvgv vsfgegcalp
     1021 qrpgvyvrvt mfvdwiksii y
//
LOCUS       XP_041325202             828 aa            linear   VRT 06-MAY-2021
DEFINITION  neural cell adhesion molecule 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325202
VERSION     XP_041325202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469268.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508324.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..828
                     /product="neural cell adhesion molecule 2"
                     /calculated_mol_wt=91836
     Region          12..104
                     /region_name="IgI_1_NCAM-2"
                     /note="First immunoglobulin (Ig)-like domain of neural
                     cell adhesion molecule NCAM-2; member of the I-set of Ig
                     superfamily (IgSF) domains; cd05866"
                     /db_xref="CDD:409452"
     Region          12..17
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409452"
     Region          20..24
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409452"
     Region          26..36
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409452"
     Site            order(27,29..30)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409452"
     Region          40..46
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409452"
     Region          49..51
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409452"
     Region          57..63
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409452"
     Region          65..73
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409452"
     Region          80..87
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409452"
     Region          92..103
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409452"
     Region          113..178
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          123..127
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          136..140
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          160..164
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          174..179
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          200..289
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          219..223
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          232..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          255..259
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          269..274
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          282..285
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          291..388
                     /region_name="IgI_NCAM-2"
                     /note="Immunoglobulin (Ig)-like I-set domain of Neural
                     Cell Adhesion Molecule 2 (NCAM-2); cd05870"
                     /db_xref="CDD:143278"
     Region          291..296
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:143278"
     Region          300..304
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:143278"
     Region          308..316
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:143278"
     Region          322..328
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:143278"
     Region          331..334
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:143278"
     Region          344..350
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:143278"
     Region          353..359
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:143278"
     Region          367..375
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:143278"
     Region          378..388
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:143278"
     Region          392..470
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          487..579
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(487,552,567)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(568..569,571..572)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          585..669
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(585,649,664)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(665..666,668..669)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..828
                     /gene="NCAM2"
                     /coded_by="XM_041469268.1:1..2487"
                     /db_xref="GeneID:121354556"
ORIGIN      
        1 mataclqmps llqvtislsk velsvgeskf ftctaigepe nidwynpqge kivsgqrvvv
       61 qkegvrsrlt iynaniedag iyrcqatdak gqtqeatvvl eiyqkltfrd ivspqefrqg
      121 edaevvcrvt sspapvvswl yrneevttia dnrfavlann nlqilkinks degvyrcegr
      181 veargeidfr diivivnvpp aiillqksfn atadrgeait lfcratgspp peitwyrngk
      241 lleenekyvl rgsntqltir diknidagpy icnaknkagn dkkqtvlqvf vqpqiiqlkn
      301 ettfengkat liceaegepi peitwkraid gmtfsegdks pdgrievkgq hgksslhikd
      361 vklsdsgryd ceaasriggh qksmyldiey aptfmsnqtm yyswegnpin iscevlanps
      421 asvqwkrgkl vlpvkntthl ktystgrkli leiaptsdsd fgrynctatn rigtryqeyt
      481 lgqadvpsnp ygvqvlelsq ttakvsfnkp dshggvpihh yqvdvkevas etwkivrshg
      541 vqtmvvlsnl epnttyeikv aavngkgqge yskieifqtl pvrepsppsi hgqpesgksf
      601 klsitkqddg gapileyivk yrskdkedqw lekkvqgsrd hiilehlqwt mgyevqitaa
      661 nrlgyseptl yefsmppkpn iitdtlfngl glgaviglgv aalllilvvt dvscffvrqc
      721 gllmcitrri cgkksgssgk skeleegkaa ylkdgskepi vemrtederi tsnedgspvn
      781 epnettplte peklplkeen gkealnpeti eikvandiiq skeddska
//
LOCUS       XP_041325215             287 aa            linear   VRT 06-MAY-2021
DEFINITION  protein EURL homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325215
VERSION     XP_041325215.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469281.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508324.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="protein EURL homolog isoform X1"
                     /calculated_mol_wt=32532
     Region          1..283
                     /region_name="EURL"
                     /note="EURL protein; pfam06937"
                     /db_xref="CDD:284377"
     CDS             1..287
                     /gene="CUNH21orf91"
                     /coded_by="XM_041469281.1:374..1237"
                     /db_xref="GeneID:121354562"
ORIGIN      
        1 mneeqfvsid ldddnicsvc klgteketls fchvcfelni egvpksdllh trslrghrdc
       61 fekfhlianq dcprsklsks pyaevknils kkinwiiqya qnkdldsdse sskpsqhqlf
      121 sfrhqtdrkl lpqfdspvpr ysakwidgks ggisscsqtl leprestdfr lgatfccssv
      181 lwsnrsqvqk aekaegdsla svhrrhpqhs reelttmtlg elkqlnekll kqiqdvfeel
      241 aqqvqekdsl aselnvrhia ieqllkncsk lpclqmgrag mksnvpi
//
LOCUS       XP_041325224             266 aa            linear   VRT 06-MAY-2021
DEFINITION  protein EURL homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325224
VERSION     XP_041325224.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469290.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508324.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="protein EURL homolog isoform X2"
                     /calculated_mol_wt=30129
     Region          1..262
                     /region_name="EURL"
                     /note="EURL protein; pfam06937"
                     /db_xref="CDD:284377"
     CDS             1..266
                     /gene="CUNH21orf91"
                     /coded_by="XM_041469290.1:380..1180"
                     /db_xref="GeneID:121354562"
ORIGIN      
        1 mneeqfvsid ldddnicsvc klgteketls fchvcfelni egvpksdllh trslrghrdc
       61 fekfhlianq dcprsklsks pyaevknils kkinwiiqya qnkdldsdse sskpsqhqlf
      121 sfrhqtdrkl lpqfdspvpr ysakwidgks ggisscsqtl leprestdfr lgatfccssv
      181 lwsnrsqvqk aekaegdsla svhrrhpqhs reehvfeela qqvqekdsla selnvrhiai
      241 eqllkncskl pclqmgragm ksnvpi
//
LOCUS       XP_041325244             633 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: integrin alpha-10-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325244
VERSION     XP_041325244.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469310.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..633
                     /product="LOW QUALITY PROTEIN: integrin alpha-10-like"
                     /calculated_mol_wt=67738
     Region          158..338
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(165,235,268)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          474..525
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          602..>628
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     CDS             1..633
                     /gene="LOC121354578"
                     /coded_by="XM_041469310.1:127..2028"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:121354578"
ORIGIN      
        1 mrgvgnqgll lalillpgla ggfnidvgrp rlfrgppesq fgyrvlqrgg rgdtwxvthg
       61 aphdpepaev lgspprcxpr fcprcpqgae ipwlsssagh lgmtlsdsed ggfvacaplw
      121 sqecgtsvfs tgrcvrldee lrpvgtvapt aqrcptfmdi vlvldgsnsi ypweevqafl
      181 gnilgrffig pgqtqvrvgr lggtavdvpv lgehptaqsl leaarnltrq egretrtama
      241 ireactesfs earggrpgaa rlllvvtdge shdgdelpaa laecdrrnvt ryaiavlghy
      301 lrrqqdpedf ireiktiasd pdekyffnvt deaalndivd algdrifsle gthgdnesaf
      361 elemsqigfs vhhledgilf gmvgahdweg gvlqerqrgr vvpareafqe efplqlrnha
      421 aylgysvssl qlpggqrllv agaprfqhkg kvvlfqldpr gtvtvaqalv gdqigsyfgs
      481 evlaldlegd gdselllvaa psylggqswe tgrvyvyrvg qdrlspagsl lpeprpqdcr
      541 fgsalgavpn lsqdglagav vgapledghr galyvfhiap rsllprraqr vgaaalgwsl
      601 ryfgisvdgr vdmdgdglvd vavgargaav vlr
//
LOCUS       XP_041325263             152 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase SRCAP-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325263
VERSION     XP_041325263.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469329.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508358.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>152
                     /product="helicase SRCAP-like"
     Region          13..84
                     /region_name="HSA"
                     /note="domain in helicases and associated with SANT
                     domains; smart00573"
                     /db_xref="CDD:214727"
     CDS             1..152
                     /gene="LOC121354594"
                     /coded_by="XM_041469329.1:20..>476"
                     /db_xref="GeneID:121354594"
ORIGIN      
        1 mkregfwslr rlpkvpepar pkvhwdylce emqwlaadfa qerrwkrgva rkvvrmvmrh
       61 heeqrqrqer akreeqaklr rvaaaiarev rhfwssvekv vqfkqqsrle ekrkkaldlq
      121 ldfivgqter ysdllsrsln aprprpaalt ca
//
LOCUS       XP_041325276             428 aa            linear   VRT 06-MAY-2021
DEFINITION  fructose-bisphosphate aldolase A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325276
VERSION     XP_041325276.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469342.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508369.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..428
                     /product="fructose-bisphosphate aldolase A-like"
                     /calculated_mol_wt=46303
     Region          4..>246
                     /region_name="Glycolytic"
                     /note="Fructose-bisphosphate aldolase class-I; pfam00274"
                     /db_xref="CDD:459742"
     CDS             1..428
                     /gene="LOC121354599"
                     /coded_by="XM_041469342.1:1..1287"
                     /db_xref="GeneID:121354599"
ORIGIN      
        1 mvytgsiakr lssvgaente enrrwyrqll ftadkrvepc iggvilfhet myqkaddgrp
       61 fpqvirdkga lvdcpqrpqc pqrprcpqrp rcpllspgld glmercaqyk kdgadfakwr
      121 cvlkitahtp trlavmenan vlaryasicq qngivpivep eilpdgdhdl ktcqyvtekv
      181 laavykalsd hhvylegtll kpnmvtagha catkyspeei amatvtalrr tvppavpgvt
      241 flsgsergga vtvpqrhhll spvslshpsv prlchsdvpm spagvtflsg serggavtvp
      301 qrhhplspvs lshpsvprlc hcpqavslsp gcvtvmspcp qqgsrscqgq seeelslsln
      361 aitqcpqcpc aipvslshps vprlmsqcpl dvpsrghvpv rvrarrschc pstpspsvps
      421 vpvpfpcp
//
LOCUS       XP_041325290             308 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 23-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325290
VERSION     XP_041325290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469356.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508380.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..308
                     /product="PHD finger protein 23-like"
     Region          247..290
                     /region_name="PHD_PHF23"
                     /note="PHD finger found in PHD finger protein 23 (PHF23);
                     cd15631"
                     /db_xref="CDD:277101"
     Site            order(254,256..261,268,278,281..283)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277101"
     CDS             1..308
                     /gene="LOC121354605"
                     /coded_by="XM_041469356.1:<1..927"
                     /db_xref="GeneID:121354605"
ORIGIN      
        1 gfwaswlgfw aprvgfwasw lgfwaprvgf waprvgfrgk fecarldfgv nlgalgcild
       61 tpgwilgriw gspihfgtfp pqdppwpssg pssprpaggd awgsapaalr tietfvrkak
      121 sskkralapp esaildkmrl kdslfdlpap qnnpgpppqk rrerrnrrgd sgmgggsrgg
      181 rensrirvkk skkrrwkkgd rgvlgrgsps eetdseeepp sppppppptf ylflgfflgd
      241 dswdlitcyc qkpfagrpmi ecsqcgtwih lscakvkknn vpdvfycqkc regprratpa
      301 tpraagds
//
LOCUS       XP_041325303             174 aa            linear   VRT 06-MAY-2021
DEFINITION  very long-chain specific acyl-CoA dehydrogenase,
            mitochondrial-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325303
VERSION     XP_041325303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508380.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>174
                     /product="very long-chain specific acyl-CoA dehydrogenase,
                     mitochondrial-like"
     Region          1..>174
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     CDS             1..174
                     /gene="LOC121354609"
                     /coded_by="XM_041469369.1:35..>558"
                     /db_xref="GeneID:121354609"
ORIGIN      
        1 mflgrlnaeq vfpypsvlte eqeqtlqelv gpltrffeev nnpakndale kvedetmkgl
       61 kelgtfglqv ppefgglgln ntqyarlvqi vgqhdlgvgi tlgahqsigf kglllygtpq
      121 qkekylprla tgewvaafcl tepgsgsdaa sirtratpsp cgtfwtlege kiwi
//
LOCUS       XP_041325316             104 aa            linear   VRT 06-MAY-2021
DEFINITION  probable ATP-dependent RNA helicase DDX52, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325316
VERSION     XP_041325316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508381.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>104
                     /product="probable ATP-dependent RNA helicase DDX52"
     Region          37..>103
                     /region_name="PLN00206"
                     /note="DEAD-box ATP-dependent RNA helicase; Provisional"
                     /db_xref="CDD:215103"
     CDS             1..104
                     /gene="LOC121354616"
                     /coded_by="XM_041469382.1:2..>313"
                     /db_xref="GeneID:121354616"
ORIGIN      
        1 msmpelsenn gikwmsslea kfedakdkkp taeklerlrr ekvnrfrhrh risiqgtdlp
       61 dpiatfeqlq eeykvhpkil eniqaagfrv ptaiqmqaip vmlh
//
LOCUS       XP_041325324             776 aa            linear   VRT 06-MAY-2021
DEFINITION  filamin-A-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325324
VERSION     XP_041325324.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469390.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508424.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>776
                     /product="filamin-A-like"
     Region          2..82
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          85..174
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          178..270
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          277..373
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          376..465
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          469..563
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          566..660
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          686..763
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     CDS             1..776
                     /gene="LOC121354639"
                     /coded_by="XM_041469390.1:<1..>2329"
                     /codon_start=3
                     /db_xref="GeneID:121354639"
ORIGIN      
        1 levgkaqeft vkakgaggqg kvgarilgps rkavpctvep gaapessavr fvprdegphs
       61 vevtydgvpv pgspfpvevv patdpskvra fgpglqggla gvpapftidt kgagtgglgl
      121 tvegpceaki ecqdngdgtc svsylptepg dyninilfag ahipgspfra piqpkfdpsk
      181 vtcegpglek atagqpgrfr vdcsragtae ltigiaseag aradvrveen gdgiytiayt
      241 prsagvhtvt veyggqpvph fpstvrvepa paavdtsgik vygpgvegka vfreavtefe
      301 vdaravskag gphvkalvsn psgnvtetfv edrgdgtyhv eytpyeeglh kvdvtyggsp
      361 vplspfrvpv tegcdptrvr vhgpgiqsgt tnqpnkftve trgagtgglg lavegpseak
      421 msctdnkdgs csveyipyep gtyslnvtyg ghqvpgspfq vpvsdvvdas rvscggpglt
      481 pghvranvpq tftvdtskag vapldvkvqg pkgvlepvdv adngdgtqrv syvpsregpy
      541 sisvrygdhe vprspfkvka lpthdaskvr asgpglnttg vpaslpveft idakdagegl
      601 lavqitdpeg kpkkasirdn qdgtytvsyv pdmtgrytil ikyggdeipy spyriravpt
      661 gdaskctvtv sigghglgrg lgptiqlgeq tlitvdakaa gkgkvtcsvc tpdgsevdvd
      721 vvenpdgtfd ifytapqpgk yvicvrfgge hipnspfqvm vseergekgk nggkwg
//
LOCUS       XP_041325347             226 aa            linear   VRT 06-MAY-2021
DEFINITION  F-BAR domain only protein 2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325347
VERSION     XP_041325347.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469413.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508435.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..226
                     /product="F-BAR domain only protein 2-like"
     Region          1..224
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     CDS             1..226
                     /gene="LOC121354656"
                     /coded_by="XM_041469413.1:<1..682"
                     /codon_start=2
                     /db_xref="GeneID:121354656"
ORIGIN      
        1 aaieevysrs mtklaksvsn ytqlgtfapv wdvfkistek laschldlmr rlqelikevh
       61 kygdeqikty kktkedvsgt leavqniqsi tqalqksken ynakfveqer lkkegatqre
      121 vykaavklkk atdtyklyve kyaavksafe qkmtetaqkf qdieethllh mkeiieslsn
      181 sikeihlqig evheefidnm tnttvksliq kfseskgtgk erpgkr
//
LOCUS       XP_041325359             503 aa            linear   VRT 06-MAY-2021
DEFINITION  cystine/glutamate transporter isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325359
VERSION     XP_041325359.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469425.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508435.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="cystine/glutamate transporter isoform X1"
                     /calculated_mol_wt=55043
     Region          1..499
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..503
                     /gene="SLC7A11"
                     /coded_by="XM_041469425.1:1..1512"
                     /db_xref="GeneID:121354662"
ORIGIN      
        1 mfrktavptv sngsylqgqa ngklssldsg qpaqegkvvl kkkvtllrgi siiigtiiga
       61 gifispkgil kntgsvgmsl tvwtvcgils lfgalcyael gtcikksggh ytyileafgp
      121 lpafvrvwve lliirpaata vislafgryi lepffmqcei pelaiklita vgitlvmvln
      181 stsvswsari qmfltfcklv ailiiivpgv iqlikgetqh fknafagnda svmglplafy
      241 sgmyaysgwf ylnfvteeve npekniplai cismiivtvg yvltnvayft tisagellls
      301 kavavtfaer lmgnfslavp vfvalscfgs mnggvfavsr mffvasregh lpeilsmihv
      361 rkhtplpavi vlhpltmiml fngdlyslln flsfarwlfi glvvagliyl rykrpdmprp
      421 fkvplfipal fsftclfmva lslysdpvnt gigfaitltg ipayylfivw dnkpkwfrkl
      481 lgrvtttlqi llevipaeen qks
//
LOCUS       XP_041325367             503 aa            linear   VRT 06-MAY-2021
DEFINITION  cystine/glutamate transporter isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325367
VERSION     XP_041325367.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469433.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508435.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="cystine/glutamate transporter isoform X2"
                     /calculated_mol_wt=55015
     Region          1..499
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..503
                     /gene="SLC7A11"
                     /coded_by="XM_041469433.1:1..1512"
                     /db_xref="GeneID:121354662"
ORIGIN      
        1 mfrktavptv sngsylqgqa ngklssldsg qpaqegkvvl kkkvtllrgi siiigtiiga
       61 gifispkgil kntgsvgmsl tvwtvcgils lfgalcyael gtcikksggh ytyileafgp
      121 lpafvrvwve lliirpaata vislafgryi lepffmqcei pelaiklita vgitlvmvln
      181 stsvswsari qmfltfcklv ailiiivpgv iqlikgetqh fknafagnda svmglplafy
      241 sgmyaysgwf ylnfvteeve npekniplai cismiivtvg yvltnvayft tisagellls
      301 kavavtfaer lmgnfslavp vfvalscfgs mnggvfavsr mffvasregh lpeilsmihv
      361 rkhtplpavi vlhpltmiml fngdlyslln flsfarwlfi glvvagliyl rykrpdmprp
      421 fkvplfipal fsftclfmva lslysdpvnt gigfaitltg ipayylfivw dnkpkwfrkl
      481 lgkvtttlqi llevipaeen qks
//
LOCUS       XP_041325378            1135 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-18 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325378
VERSION     XP_041325378.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469444.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508435.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1135
                     /product="protocadherin-18 isoform X1"
                     /calculated_mol_wt=125740
     Region          32..111
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          144..242
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(148..149,205,207,238,240..241)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          250..350
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(257..258,313,315,346,348..349)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          369..461
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(371..372,424,426,457,459..460)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          470..571
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(476..477,534,536,567,569..570)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          586..676
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..1135
                     /gene="PCDH18"
                     /coded_by="XM_041469444.1:401..3808"
                     /db_xref="GeneID:121354677"
ORIGIN      
        1 myridgkmhf lfifaliiis cnnavlgknl kyriyeeqrv gsviarlsed vadvllkmpn
       61 pssvrframq rgnspllvvr edngeisiga kidreqlcqk nlncsiefdv itlptehlql
      121 fhvevevldi ndnspqfsra lipieisesa avgtriplds afdpdvgdns lhtyslsand
      181 ffsidvrtrt dgakyaeliv vkeldrelks tyelqltasd kgvpqrsgss llkisisdsn
      241 dnspvfeqqs yiiqlfensp igtllidlna tdpdegangk vvysfsshvs akiietfrid
      301 pekghltllk qvdyevtksy eidaqaqdmg pnsipahcki iikvvdvndn kpeinlnlms
      361 tereevacis egspldtfva lvrvqdkdsg vngeivcklh ghghfklqkt yennyliltn
      421 atldrekrse yiltviaedk gtpslstvkh ftvqisdend npprfqtnry evvilennsp
      481 gayitsvtat dpdlgdngqv tytilensvl gssittyvti dpsngaiyal rtfdheevnq
      541 iafmvqardg gtqqlisntt vvltiidend napvivgpal rnstaeisip kdaeigflvt
      601 riratdrdsg mnselscsia adkensifvm dpqtcdisin vsvesvpakq weflvivqdk
      661 gspqlstkal lkctilehvy sfssteatlv sqpsldismi tiislgsica vllvimvifa
      721 trcnrekkdt rsyncrvaes tyqhhpkrps rqihkgditl vptvngtlpi rshhraspss
      781 spalergqms srqshhshqs lnslvtissn hvpesfslel thatpavevs qllsmlhqgq
      841 yqprpsfrgn kysrsyryal qdmdkfslkd sgrgdseagd sdydlgresp idrllgegfs
      901 dlfltdgrip aamrlcteec rvlghsdqcw mpplpspssd yrsnmfipge efqspqqhlq
      961 qqqhhqglee daqaadtsek kksfstfgkd cqseedsgdt ctssllsems svfqrllpps
     1021 ldaytecnei drsnslerrk ghlpaknvny ppgvaawaas thfqnpanng palgthsgaq
     1081 psskwlpame eipenyeedd fdnvlnhlsd gkhelmdase lvaeinkllq dvrqn
//
LOCUS       XP_041325389            1088 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-18 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325389
VERSION     XP_041325389.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469455.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508435.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1088
                     /product="protocadherin-18 isoform X2"
                     /calculated_mol_wt=120518
     Region          <18..64
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          97..195
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(101..102,158,160,191,193..194)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          203..303
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(210..211,266,268,299,301..302)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          322..414
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(324..325,377,379,410,412..413)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          423..524
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(429..430,487,489,520,522..523)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          539..629
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..1088
                     /gene="PCDH18"
                     /coded_by="XM_041469455.1:176..3442"
                     /db_xref="GeneID:121354677"
ORIGIN      
        1 mrkrglltdc iwmsrnvrfr amqrgnspll vvredngeis igakidreql cqknlncsie
       61 fdvitlpteh lqlfhvevev ldindnspqf sralipieis esaavgtrip ldsafdpdvg
      121 dnslhtysls andffsidvr trtdgakyae livvkeldre lkstyelqlt asdkgvpqrs
      181 gssllkisis dsndnspvfe qqsyiiqlfe nspigtllid lnatdpdega ngkvvysfss
      241 hvsakiietf ridpekghlt llkqvdyevt ksyeidaqaq dmgpnsipah ckiiikvvdv
      301 ndnkpeinln lmstereeva cisegspldt fvalvrvqdk dsgvngeivc klhghghfkl
      361 qktyennyli ltnatldrek rseyiltvia edkgtpslst vkhftvqisd endnpprfqt
      421 nryevvilen nspgayitsv tatdpdlgdn gqvtytilen svlgssitty vtidpsngai
      481 yalrtfdhee vnqiafmvqa rdggtqqlis nttvvltiid endnapvivg palrnstaei
      541 sipkdaeigf lvtriratdr dsgmnselsc siaadkensi fvmdpqtcdi sinvsvesvp
      601 akqweflviv qdkgspqlst kallkctile hvysfsstea tlvsqpsldi smitiislgs
      661 icavllvimv ifatrcnrek kdtrsyncrv aestyqhhpk rpsrqihkgd itlvptvngt
      721 lpirshhras pssspalerg qmssrqshhs hqslnslvti ssnhvpesfs lelthatpav
      781 evsqllsmlh qgqyqprpsf rgnkysrsyr yalqdmdkfs lkdsgrgdse agdsdydlgr
      841 espidrllge gfsdlfltdg ripaamrlct eecrvlghsd qcwmpplpsp ssdyrsnmfi
      901 pgeefqspqq hlqqqqhhqg leedaqaadt sekkksfstf gkdcqseeds gdtctsslls
      961 emssvfqrll ppsldaytec neidrsnsle rrkghlpakn vnyppgvaaw aasthfqnpa
     1021 nngpalgths gaqpsskwlp ameeipenye eddfdnvlnh lsdgkhelmd aselvaeink
     1081 llqdvrqn
//
LOCUS       XP_041325400             715 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein
            2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325400
VERSION     XP_041325400.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469466.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508447.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 20% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>715
                     /product="LOW QUALITY PROTEIN: IQ motif and SEC7
                     domain-containing protein 2-like"
     Region          171..359
                     /region_name="Sec7"
                     /note="Sec7 domain; pfam01369"
                     /db_xref="CDD:460178"
     Region          <376..463
                     /region_name="IQ_SEC7_PH"
                     /note="PH domain; pfam16453"
                     /db_xref="CDD:465120"
     CDS             1..715
                     /gene="LOC121354688"
                     /coded_by="XM_041469466.1:311..>2455"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121354688"
ORIGIN      
        1 mlerkyggyf rsrraartiq aafrryrmaq kferlrsegg rarrlalpgl rlqfsfeeyd
       61 rgppapapgp pvemlerkyg gyfrsrraar tiqaafrryr maqkferlrs eggrarrlal
      121 pglrlqfsfe dppptappqp pgaagapgka tyqreprqsw dspalnndvv qrrqyrigln
      181 lfnkkpekgi qyliergfls dtpvgvahfi lerkglsrqm igeflgnrqk qfnrdvldcv
      241 vdemdfsgme ldealrkfqs hirvqgeaqk verlieassq rycvcnaall rqfrnpdtif
      301 ilafaiilln tdmyspsvka erkmkledfi knlrgvdnge diprdmlvgi yqriqsrelr
      361 tnddhvsqvq avermivgkk pxcvssilvt ysfrqsfplv emhmqlfqna yyqfgiklls
      421 aapggerkvl ivfnapspqd rlrfasdlre svaevqemek yrvegehweh wehwegdwgg
      481 lgsswdyqfg ikllsaapgg erkvlivfna pspqdrlrfa sdlresvaev qemekalgns
      541 gcpggvswgd lgcpegfgvs wegpwgdlgc pegfgvswgg pwgspltapp ppgkrgrrns
      601 vgsldstieg siissprpqa rggpggapdg aykpparpvs nsssflgslf gsrrgkgppg
      661 pppgaggpts asassssass shhhhhpppa appeapsklq alhaqychgp gggsa
//
LOCUS       XP_041325414             183 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 668-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325414
VERSION     XP_041325414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469480.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508457.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>183
                     /product="zinc finger protein 668-like"
     Region          86..106
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(91,93,95,97..98,101..102,105,119,121,125..126,
                     129..130,133,147,149,151,153..154,157..158,161)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          114..134
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          142..162
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..183
                     /gene="LOC121354692"
                     /coded_by="XM_041469480.1:<1..>549"
                     /db_xref="GeneID:121354692"
ORIGIN      
        1 spgdvtapls tpgpahhspg dvtgpsspah dspganpdsp gdvtgplstp gdvtapsssp
       61 gpaqdspgdv tgpapgpsps appwacpscp rrfpsparla ahlrshsger pltcpqcaka
      121 faapaafrrh lrghaglrph tcgtcakaya erkdltnhlr ahtgeghtwd tpggdgthlt
      181 ytw
//
LOCUS       XP_041325426             450 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 4B-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325426
VERSION     XP_041325426.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469492.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508458.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>450
                     /product="leucine-rich repeat-containing protein 4B-like"
     Region          <10..>224
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          24..47
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          48..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          72..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..120
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          121..142
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          143..166
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          167..190
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          191..212
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          223..273
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     Region          276..350
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     CDS             1..450
                     /gene="LOC121354701"
                     /coded_by="XM_041469492.1:1..>1349"
                     /db_xref="GeneID:121354701"
ORIGIN      
        1 mtnpitsppl qvirtdtfkh lrhleilqls rnlvrkvevg afnglpnlnt lelfdnrltt
       61 vptqafeyls klrelwlrnn piesipsyaf nrvpslrrld lgelkrleyi seaafeglvn
      121 lrylnlgmcn lkeipnltal vrleelelsg nrlgrvrpgs fqglgslrkl wlmharvaav
      181 ernafddlka leelnlahnd laslphdlfa plhrlervhl hhnpwrcdcd vlwlswwlre
      241 tvpsntscca rchappalrg rylgelepgh ftcyapvive ppadlnvteg maaelkcrtg
      301 tamtsvnwlt pngtlmthgs yrvrisvlhd gtlnftnvtv qdtgqytcmv tnaagnttat
      361 atlnvsaada aaaaaaaaaa tgytyfttvt vettegaggd dqapqtpaap taagwepaga
      421 staapatrat gkpftvpita aaaaaagrgg
//
LOCUS       XP_041325439             251 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily C member 27, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325439
VERSION     XP_041325439.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469505.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508469.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>251
                     /product="dnaJ homolog subfamily C member 27"
     Region          <16..119
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            69..72
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133319"
     Site            99..101
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133319"
     CDS             1..251
                     /gene="DNAJC27"
                     /coded_by="XM_041469505.1:<1..>755"
                     /db_xref="GeneID:121354710"
ORIGIN      
        1 vpnefyrdtq vlvhhvrnef yrdtqgvllv ydvgskdsfe aldswlaemr relgphgsld
       61 nvvfavcank vdagklrvvd esegrlwaes rgflywetsa qsgegiqemf qnfysaivdl
      121 cenggkrppg gsgisftreq adairrirss kdswdalglk pgasrcggrr kngnspwekg
      181 gippgksgkk paefrweknf ysaivdlcen ggkrppggsg isftreqada irrirsskds
      241 wdalglkpga s
//
LOCUS       XP_041325453              88 aa            linear   VRT 06-MAY-2021
DEFINITION  SCO-spondin-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325453
VERSION     XP_041325453.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469519.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508475.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..88
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>88
                     /product="SCO-spondin-like"
     CDS             1..88
                     /gene="LOC121354712"
                     /coded_by="XM_041469519.1:<1..>265"
                     /db_xref="GeneID:121354712"
ORIGIN      
        1 rtvpvteqqe vtprreaavp cpslyqysla gwrldrdrtr rergnspgdt gtdpalcyvy
       61 rppemqpvvr nrtergccpg wsgarcte
//
LOCUS       XP_041325468             287 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoprotein L-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325468
VERSION     XP_041325468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469534.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508480.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="heterogeneous nuclear ribonucleoprotein L-like"
                     /calculated_mol_wt=29544
     Region          90..>250
                     /region_name="hnRNP-L_PTB"
                     /note="hnRNP-L/PTB/hephaestus splicing factor family;
                     TIGR01649"
                     /db_xref="CDD:273733"
     CDS             1..287
                     /gene="LOC121354717"
                     /coded_by="XM_041469534.1:34..897"
                     /db_xref="GeneID:121354717"
ORIGIN      
        1 msrrrwrgpq gaegggrgad mgkmatgggg ggsgryyggg ggseggrapk rlktesaeap
       61 phgpggpgga gggagaggse nyedphktpa spvvhirgli dgiveadlve alqefgpirw
      121 ghwghggdsv svlgtwgqca rdvtnnvllf ailnpiysit tdvlyticnp cgpvqrivif
      181 rkngvqamve fdsvqsaqra kaslngadiy sgcctlkiey akpsrlnvfk ndqdtwdytn
      241 pnlsgtgkag qphlgqvgtr eggatappql wggslgfwev wkgggag
//
LOCUS       XP_041325482              96 aa            linear   VRT 06-MAY-2021
DEFINITION  uracil phosphoribosyltransferase homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041325482
VERSION     XP_041325482.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469548.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508519.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="uracil phosphoribosyltransferase homolog"
                     /calculated_mol_wt=9721
     CDS             1..96
                     /gene="LOC121354723"
                     /coded_by="XM_041469548.1:24..314"
                     /db_xref="GeneID:121354723"
ORIGIN      
        1 meampcqnqr lgprpqdepp aaatatasgg srlirfaeps edsgcpspds sssssngvva
       61 apvpagegga paigpqlkll pmndqlrelq tiirdk
//
LOCUS       XP_041325494             135 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type I cytoskeletal 14-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325494
VERSION     XP_041325494.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469560.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508521.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>135
                     /product="keratin, type I cytoskeletal 14-like"
     Region          <1..135
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..135
                     /gene="LOC121354729"
                     /coded_by="XM_041469560.1:1..>407"
                     /db_xref="GeneID:121354729"
ORIGIN      
        1 mtalrgqvgg eisvemdaap gidltkilae mreqyeslae knrrdaeqwf fskteelnre
       61 vainteqlqs gkteitelrr tiqsleidlq sqlstkaale gtladteary gsqlaqlqml
      121 itgveeqlae lrcdm
//
LOCUS       XP_041325502             129 aa            linear   VRT 06-MAY-2021
DEFINITION  SUMO-activating enzyme subunit 1, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325502
VERSION     XP_041325502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508523.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>129
                     /product="SUMO-activating enzyme subunit 1"
     Region          17..>128
                     /region_name="E1_enzyme_family"
                     /note="Superfamily of activating enzymes (E1) of the
                     ubiquitin-like proteins. This family includes classical
                     ubiquitin-activating enzymes E1, ubiquitin-like (ubl)
                     activating enzymes and other mechanistic homologes, like
                     MoeB, Thif1 and others. The common...; cl22428"
                     /db_xref="CDD:451392"
     CDS             1..129
                     /gene="SAE1"
                     /coded_by="XM_041469568.1:183..>569"
                     /db_xref="GeneID:121354736"
ORIGIN      
        1 mvekdesspg giseeeaaqy drqirlwgle aqkrlrasrv llvglrglga evaknlilag
       61 vrgltlldhq qvspedsraq flipagslgr nraeaslera qslnpmvevk adpesveskp
      121 hefftqfda
//
LOCUS       XP_041325514            1615 aa            linear   VRT 06-MAY-2021
DEFINITION  SET-binding protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325514
VERSION     XP_041325514.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469580.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1615
                     /product="SET-binding protein isoform X1"
                     /calculated_mol_wt=177644
     CDS             1..1615
                     /gene="SETBP1"
                     /coded_by="XM_041469580.1:671..5518"
                     /db_xref="GeneID:121354745"
ORIGIN      
        1 mepretlsss rqrggeadfl paavtstkpl pvsgcagetm lsssgagkgi pvsserlepe
       61 eedelgsgrd vdstsnadse kwvagdglee qefsikeanf tegslklkiq ttkrakkppk
      121 nlenyicppe ikitikqsge qklsrtgkns kttkeedrsh skkkgkvigd akllmscgcr
      181 kgknsqvkds dqsqmknlgr ecgfpvqspv tksvnkvydr pqkhsalhyd pglqqdftsd
      241 tlkskhqqks snqhhidwsa ssdtgpasqs cfintepsre aisatkvsal epgvsysksq
      301 akkscsssss sswgqlsvss kelaicstvp spssistaaq pssasecngl lplgdqegav
      361 qleapdqpag stkkksskkd lmsqtiqttd mewvksaqka fdskshdgme gkkesysmds
      421 mldmspskqn pvsastcesd tnhvritipi kspttdvsgh krkkrqsiks siektiqeks
      481 lpsvlalsse manrtssqpe gskkdlratk pgkvtenesp lvaidsgvft dkaspnsaar
      541 prkplpvtst llptnlstag klpdiqhpkh aakrrwtcsk pksilretsl ttseklmvep
      601 psaypitpss plytntdslt vitpvkkkrg rpkkqplltv etihegtsts pvspinrefp
      661 gtkkrkrrrn lakfaqmvpg edksiselkf hkkvgklgvl dkktiktink mktlkrknil
      721 nqilsscsss ialkakvqpp ssagpttida rlgkqinvsk rgtiyigkkr grkpraelqp
      781 qteepktaik hsrpvssqpe npavpsnlqs lvasspaaih plstqlvgin gnlspastet
      841 nfselktmpn lqpisalptk tqkgmhsgtw klspprlman spshlceigs lkevtlspvs
      901 eshseetips dsgigtdnns tsdqaeksse srrrysfdfc tldnpeaips dtstknrhgh
      961 rqkhlivdnf lshesikkpk hkrkrkslqn rddlqfladl eelinkfqvf rishrsytfy
     1021 henpypsifr infdhyypvp yiqydpllyl rrtsdmkskk krgrpaktnd tmtkvpflqg
     1081 fgypipsgsy yapygmpyts mpmmnlgyyg qypaplylsh tlgaaspfmr ptvpppqfha
     1141 sshmkmstta khkakhgvhl qtpvgmglgd mqsslappkv ggaslssgrl hkrkhkhkhk
     1201 hkderilgth edlsglfask stgfsshain erlsgsdkdl sllnekskhk ekqkhqhcet
     1261 ghkgsksnfe vdtlstlsls daqqwsqskd ksdsssdpid sctkrysgnt esngrsesld
     1321 mfgeinssse krdndasgnk rrsfegfgty rekdiqpfkt nrkdrstfds sassgitgph
     1381 lkadqtslhg kmessacnvm trrkpaavds vampspvlsl lpsssatsea assplkkrfk
     1441 rreieaiqce vrkmcnytki lstkknldhv nkilkakrlq rqsktgnnfv kkrrgrprkq
     1501 plsfdedsrd qmpvlekcvd lpskrgqrpt lnplileqaa tqdtimatie avihmaretp
     1561 plppplpppp pplplplpra prvgkrknks pqeeeedvkv krhrkgrgse seglp
//
LOCUS       XP_041325524            1587 aa            linear   VRT 06-MAY-2021
DEFINITION  SET-binding protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325524
VERSION     XP_041325524.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469590.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1587
                     /product="SET-binding protein isoform X2"
                     /calculated_mol_wt=174696
     CDS             1..1587
                     /gene="SETBP1"
                     /coded_by="XM_041469590.1:671..5434"
                     /db_xref="GeneID:121354745"
ORIGIN      
        1 mepretlsss rqrggeadfl paavtstkpl pvsgcagetm lsssgagkgi pvsserlepe
       61 eedelgsgrd vdstsnadse kwvagdglee qefsikeanf tegslklkiq ttkrakkppk
      121 nlenyicppe ikitikqsge qklsrtgkns kttkeedrsh skkksqmknl grecgfpvqs
      181 pvtksvnkvy drpqkhsalh ydpglqqdft sdtlkskhqq kssnqhhidw sassdtgpas
      241 qscfinteps reaisatkvs alepgvsysk sqakkscsss sssswgqlsv sskelaicst
      301 vpspssista aqpssasecn gllplgdqeg avqleapdqp agstkkkssk kdlmsqtiqt
      361 tdmewvksaq kafdskshdg megkkesysm dsmldmspsk qnpvsastce sdtnhvriti
      421 pikspttdvs ghkrkkrqsi kssiektiqe kslpsvlals semanrtssq pegskkdlra
      481 tkpgkvtene splvaidsgv ftdkaspnsa arprkplpvt stllptnlst agklpdiqhp
      541 khaakrrwtc skpksilret slttseklmv eppsaypitp ssplytntds ltvitpvkkk
      601 rgrpkkqpll tvetihegts tspvspinre fpgtkkrkrr rnlakfaqmv pgedksisel
      661 kfhkkvgklg vldkktikti nkmktlkrkn ilnqilsscs ssialkakvq ppssagptti
      721 darlgkqinv skrgtiyigk krgrkprael qpqteepkta ikhsrpvssq penpavpsnl
      781 qslvasspaa ihplstqlvg ingnlspast etnfselktm pnlqpisalp tktqkgmhsg
      841 twklspprlm anspshlcei gslkevtlsp vseshseeti psdsgigtdn nstsdqaeks
      901 sesrrrysfd fctldnpeai psdtstknrh ghrqkhlivd nflshesikk pkhkrkrksl
      961 qnrddlqfla dleelinkfq vfrishrsyt fyhenpypsi frinfdhyyp vpyiqydpll
     1021 ylrrtsdmks kkkrgrpakt ndtmtkvpfl qgfgypipsg syyapygmpy tsmpmmnlgy
     1081 ygqypaplyl shtlgaaspf mrptvpppqf hasshmkmst takhkakhgv hlqtpvgmgl
     1141 gdmqsslapp kvggaslssg rlhkrkhkhk hkhkderilg thedlsglfa skstgfssha
     1201 inerlsgsdk dlsllneksk hkekqkhqhc etghkgsksn fevdtlstls lsdaqqwsqs
     1261 kdksdsssdp idsctkrysg ntesngrses ldmfgeinss sekrdndasg nkrrsfegfg
     1321 tyrekdiqpf ktnrkdrstf dssassgitg phlkadqtsl hgkmessacn vmtrrkpaav
     1381 dsvampspvl sllpsssats eaassplkkr fkrreieaiq cevrkmcnyt kilstkknld
     1441 hvnkilkakr lqrqsktgnn fvkkrrgrpr kqplsfdeds rdqmpvlekc vdlpskrgqr
     1501 ptlnplileq aatqdtimat ieavihmare tpplppplpp pppplplplp raprvgkrkn
     1561 kspqeeeedv kvkrhrkgrg seseglp
//
LOCUS       XP_041325535             405 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C18orf25 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325535
VERSION     XP_041325535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="uncharacterized protein C18orf25 homolog isoform
                     X1"
                     /calculated_mol_wt=43307
     Region          <91..228
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     CDS             1..405
                     /gene="CUNH18orf25"
                     /coded_by="XM_041469601.1:213..1430"
                     /db_xref="GeneID:121354757"
ORIGIN      
        1 mkmeavgkae elvdseippk tsekqetapd edrpieletq pqkdsvptaa dsgvlstmpc
       61 llmelrrdss esqlastesd kpaggrvyes dssnhcmlsp sssghladsd tlssaeenep
      121 cqaeaaaegd psavsgaavg rksrrsrses etstmaakkn rqssdkqngr vtkvkghrsq
      181 khkerirllr qkreaaarkk ynllqdssts dsdltcdsst sssdddeevs gssktitaei
      241 pdgppvvahy disdtnsdpe vvnvdnllaa avvqehsnsl gnqdsgsawr trgllnemsa
      301 dtgrldpgfl agdktscgna qaneeisias sdseveivgv qeharcvhpr ggviqsvssw
      361 krgspfgsaq paqpwtavap qqnwssppev vdltldedtr rkyll
//
LOCUS       XP_041325544             392 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C18orf25 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325544
VERSION     XP_041325544.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469610.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="uncharacterized protein C18orf25 homolog isoform
                     X2"
                     /calculated_mol_wt=42691
     Region          <91..228
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     CDS             1..392
                     /gene="CUNH18orf25"
                     /coded_by="XM_041469610.1:213..1391"
                     /db_xref="GeneID:121354757"
ORIGIN      
        1 mkmeavgkae elvdseippk tsekqetapd edrpieletq pqkdsvptaa dsgvlstmpc
       61 llmelrrdss esqlastesd kpaggrvyes dssnhcmlsp sssghladsd tlssaeenep
      121 cqaeaaaegd psavsgaavg rksrrsrses etstmaakkn rqssdkqngr vtkvkghrsq
      181 khkerirllr qkreaaarkk ynllqdssts dsdltcdsst sssdddeevs gssktitaei
      241 pagfsraggs ggatreipgl ldrgtvwdrn cignvleeam ncfaemqrqt eekfrmwiek
      301 lthldtdees kqqleprepk iqlvgqripp ttqsgafvqm pdsqalpqqp fnsyvgyqna
      361 daalefpvtf nnnfppifpe ngnmaepdln ks
//
LOCUS       XP_041325569             425 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325569
VERSION     XP_041325569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="synaptotagmin-4"
                     /calculated_mol_wt=47898
     Region          153..279
                     /region_name="C2A_Synaptotagmin-4-11"
                     /note="C2A domain first repeat present in Synaptotagmins 4
                     and 11; cd08388"
                     /db_xref="CDD:176034"
     Region          288..423
                     /region_name="C2B_Synaptotagmin-4"
                     /note="C2 domain second repeat present in Synaptotagmin 4;
                     cd08404"
                     /db_xref="CDD:176049"
     Site            order(318,324,378,380,385)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176049"
     CDS             1..425
                     /gene="SYT4"
                     /coded_by="XM_041469635.1:401..1678"
                     /db_xref="GeneID:121354774"
ORIGIN      
        1 mapiadsrqq fdeipavvgi fsafglvfsv slfawiccqr kssksnktpp ykfvhvlkgv
       61 diypenlnsk kkfgaddkse aknksampkn slhldlekrd lngnfpktnt kmqgspdlen
      121 sspkhfaerk kdsvspdslk sitslssedk qdklgtlffs leynfekkaf vvnikeargl
      181 pamdeqsmts dpyikmtilp ekkhkvktrv lrktldpafd etftfygipy sqiqdltlhf
      241 milsfdrfsr ddvigevlip lagielsegr llmdreiikr nvrkssgrge llvslcyqst
      301 tntltvvvlk arhlpksdvs glsdpyvkvn lyhakkrisk kkthvkkctp navfnelfvf
      361 dipceglddi sieflvldsd rgsrnevigr ltlgssaegt ggehwkeice yprrqiakwh
      421 mlcdg
//
LOCUS       XP_041325580             217 aa            linear   VRT 06-MAY-2021
DEFINITION  GTP-binding protein Rit2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325580
VERSION     XP_041325580.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469646.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="GTP-binding protein Rit2"
                     /calculated_mol_wt=24774
     Region          19..186
                     /region_name="Rit_Rin_Ric"
                     /note="Ras-like protein in all tissues (Rit), Ras-like
                     protein in neurons (Rin) and Ras-related protein which
                     interacts with calmodulin (Ric); cd04141"
                     /db_xref="CDD:206712"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206712"
     Site            order(28..29,76..77)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206712"
     Site            order(29..35,74,77,133..134,136,163..164)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206712"
     Site            order(34..35,49,51,57..58,71..72,74,76..77,165)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206712"
     Site            order(50..51,55..58)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206712"
     Site            50..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206712"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206712"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206712"
     Site            order(76..80,82..94)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206712"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206712"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206712"
     CDS             1..217
                     /gene="RIT2"
                     /coded_by="XM_041469646.1:1..654"
                     /db_xref="GeneID:121354782"
ORIGIN      
        1 melenamiss ssssssgsre ykvvmlgagg vgksamtmqf ishrfpdyhd ptiedayktq
       61 vriddepayl dildtagqae ftamrdqymr ggegfiicys itdrqsfqea aefkeliyrv
      121 rhtydipvvl vgnkidleef rqvsteegms lareyscsff etsaalrfyi ddvfhglvre
      181 irrkesslsm iekkmkrkds lwrklkgslk kkkestt
//
LOCUS       XP_041325592            2573 aa            linear   VRT 06-MAY-2021
DEFINITION  ectopic P granules protein 5 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325592
VERSION     XP_041325592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2573
                     /product="ectopic P granules protein 5 homolog isoform X1"
                     /calculated_mol_wt=291339
     CDS             1..2573
                     /gene="EPG5"
                     /coded_by="XM_041469658.1:57..7778"
                     /db_xref="GeneID:121354793"
ORIGIN      
        1 maeavrpprr arsrpkekkk ksseepqvqe pddvflppvp egssqagrvq vehpgeftei
       61 qlrdeadnrr tindvsdipq sslspanega lavtleppkd aeevkadpsq eecvenieks
      121 kldkpqspve avasgsrnsd llssafqssa applsvmgfv qgrraesrqd frdplscsse
      181 klslsssqhs ekskarvprp vypdlslels yekptimavk pllhherlyp elpsepelvp
      241 ftreqlkife pcswlenvds yaeefesvah qdrhefyell lnymrcrkql llaeaelqam
      301 ttdcqnvkgr lwtfkeqqkt vqgvcadqck vtghhryqtv elnesvlgel kklfeakaeh
      361 vhqtlalhsy tsvlsrlqve syvyrllsss sllrsvalqq qeqvskqsen lssdlshlke
      421 cisvlfsftr rviedpqfhs dllmwlqrlv svlqrigcpg dhlflfnhil rcpagisewa
      481 cpfiqikvlg npsgvfhfmq slallmspvk nrvdfmchmk pserksssss gkesgnwtlv
      541 deggeededp etswillled dliallsqfp fhelfqqflg ftsegayfpe ktspqkmmki
      601 fafanslvel lsvgletfnr aryrqfvkri gqlikmtlch vsdhwaqyvs gnkqygsveh
      661 pysveklqle fdelffravl hvlkakrlgv wlfmsempyg tlsssmlwrl ffvmhcaene
      721 hleqlcstlq padykrrlkd pehlaqfeky lqsmncseei cllttfaqma qtkradided
      781 fikivvleiy evsyvslstr etfskvgrel lgaiasihtq iisvlldrir etiekvgmvs
      841 lylfkelply lwkpssseia lirdwllnys ltavenklac iileglnwgf geqqntlhld
      901 pavhsevalm vleayqkyls qkpyagllse sikqvsylas ivrygetpet sfnqwawslv
      961 lrlklhrndr gvqqsglavp acdsaldtae svtlhpllka vkanvpigcy lalamttlgh
     1021 siekfcaegi pllgvlvqsr hlrtvvhvld kilplfyscq yyllkneqfl syvelflhld
     1081 sgvpqgvtqq vthkvtqhlt gvnygenvkl lssmiqthif lsdhpngvgp aavlefwvqv
     1141 ltsqqlwhrd ratlcllddl ckaafqysqe dcvqkllyqq hknalgyhcd kgmlsslvsw
     1201 ivagnvtpsf vegsanssqv wfawtvlnme sifeedsqlr rvvegelvin altpdqalkk
     1261 aqtqlklpiv pslqrlmiyr wahqalatpa dhplmplvwq kffllylhrp gpqyglpvdg
     1321 cigrrffqsa ahvnllnemk qrltevadfh haaskalrve spegsdrspe kascsadylt
     1381 spelhkelvr lcnvlilwle eesfqkgdty ipslpkqyda hrlakvmqnq qdlwmeyvnv
     1441 elihhefqea lnlwlqvqle shptcasage tdftnplsak vrimnnlkkl dtpkpplplq
     1501 tmkapvpvis satlvsqkda iqlmrrdlni lqqhaktaal cesqhvalns eildtvpkly
     1561 vnreeqitlh lecrgisnkg cqgaaqltiq fegkhkneav sqqlhalrke vrqlqaeamk
     1621 ppslgvveaa vhvenfital iniykvqpmp aikkvgiglf ftlveyvcde tqrnpptrqf
     1681 ftscieilgq vfisgtksec krllqtilqn rrlctllspy ftpvaspsef vtlyekvvaf
     1741 lsednsdvvf mlltkfdltq wlsvakppls ertqllesih lalnacglep eedilmpfni
     1801 fckhwtnllq yqfpdhysdf lrlfvqssse qllspdcwka slqalgcdsa vteqgsfkks
     1861 dsaegpvvrd gaktllsieq vretiewlst sfcklrlasv dfrtfglfsk wtpyvaavnt
     1921 flqylikrlt dtevanlaqe pigssrilaa lqslysviag lfrpwilvle kedassqpcy
     1981 pwlesdtpva stmvclfadc ikllhesfke kllpshhgal wlhlmhycec ctapkmpefi
     2041 lyafhtefkr lpwkemhpdq mlmeeffkie rgspkscflf lgyvlcevnw vsvlsdawnp
     2101 nphpqthsmi vcllymmvll akeeqligee esplinllgq tsslpwqlvg issyesiisy
     2161 cnshyppsvi lakdagaeli vkllkisagf gtssdshihl datlkcrvyi rqvvqflstl
     2221 eqsgkitlav leqemaklld dvvifnppdm dlqtrhlals slftetlmml nnssittaes
     2281 lrgslrrwih srvqgllamp lltaachsla svrhmaette acitsyfskd sphhqelgwg
     2341 pilaslqvpe ltmeeflqec lslgsyltly vyllqclntd qtlanemkil ltiskwleqv
     2401 ypssakeeak lflwwhkamq lslvqleqdd pvliesvirt llsiqvrqsq laeerltsgi
     2461 lgaiglgrrs plsprfrvva rslsafllvq ipaesqvrlk agseprlsqk aqqalsalea
     2521 mssnkqymdy qeqlsqaclf ikhpehclqd gnnllsllvn tlypevhfld sir
//
LOCUS       XP_041325612            2572 aa            linear   VRT 06-MAY-2021
DEFINITION  ectopic P granules protein 5 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325612
VERSION     XP_041325612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2572
                     /product="ectopic P granules protein 5 homolog isoform X2"
                     /calculated_mol_wt=291211
     CDS             1..2572
                     /gene="EPG5"
                     /coded_by="XM_041469678.1:57..7775"
                     /db_xref="GeneID:121354793"
ORIGIN      
        1 maeavrpprr arsrpkekkk ksseepqvqe pddvflppvp egssqagrvq vehpgeftei
       61 qlrdeadnrr tindvsdipq sslspanega lavtleppkd aeevkadpsq eecvenieks
      121 kldkpqspve avasgsrnsd llssafqssa applsvmgfv qgrraesrqd frdplscsse
      181 klslsssqhs ekskarvprp vypdlslels yekptimavk pllhherlyp elpsepelvp
      241 ftreqlkife pcswlenvds yaeefesvah qdrhefyell lnymrcrkql llaeaelqam
      301 ttdcqnvkgr lwtfkeqqkt vqgvcadqck vtghhryqtv elnesvlgel kklfeakaeh
      361 vhqtlalhsy tsvlsrlqve syvyrllsss sllrsvalqq qeqvskqsen lssdlshlke
      421 cisvlfsftr rviedpqfhs dllmwlqrlv svlqrigcpg dhlflfnhil rcpagisewa
      481 cpfiqikvlg npsgvfhfmq slallmspvk nrvdfmchmk pserksssss gkesgnwtlv
      541 deggeededp etswillled dliallsqfp fhelfqqflg ftsegayfpe ktspqkmmki
      601 fafanslvel lsvgletfnr aryrqfvkri gqlikmtlch vsdhwaqyvs gnkqygsveh
      661 pysveklqle fdelffravl hvlkakrlgv wlfmsempyg tlsssmlwrl ffvmhcaene
      721 hleqlcstlq padykrrlkd pehlaqfeky lqsmncseei cllttfaqma qtkradided
      781 fikivvleiy evsyvslstr etfskvgrel lgaiasihtq iisvlldrir etiekvgmvs
      841 lylfkelply lwkpssseia lirdwllnys ltavenklac iileglnwgf geqntlhldp
      901 avhsevalmv leayqkylsq kpyagllses ikqvsylasi vrygetpets fnqwawslvl
      961 rlklhrndrg vqqsglavpa cdsaldtaes vtlhpllkav kanvpigcyl alamttlghs
     1021 iekfcaegip llgvlvqsrh lrtvvhvldk ilplfyscqy yllkneqfls yvelflhlds
     1081 gvpqgvtqqv thkvtqhltg vnygenvkll ssmiqthifl sdhpngvgpa avlefwvqvl
     1141 tsqqlwhrdr atlcllddlc kaafqysqed cvqkllyqqh knalgyhcdk gmlsslvswi
     1201 vagnvtpsfv egsanssqvw fawtvlnmes ifeedsqlrr vvegelvina ltpdqalkka
     1261 qtqlklpivp slqrlmiyrw ahqalatpad hplmplvwqk ffllylhrpg pqyglpvdgc
     1321 igrrffqsaa hvnllnemkq rltevadfhh aaskalrves pegsdrspek ascsadylts
     1381 pelhkelvrl cnvlilwlee esfqkgdtyi pslpkqydah rlakvmqnqq dlwmeyvnve
     1441 lihhefqeal nlwlqvqles hptcasaget dftnplsakv rimnnlkkld tpkpplplqt
     1501 mkapvpviss atlvsqkdai qlmrrdlnil qqhaktaalc esqhvalnse ildtvpklyv
     1561 nreeqitlhl ecrgisnkgc qgaaqltiqf egkhkneavs qqlhalrkev rqlqaeamkp
     1621 pslgvveaav hvenfitali niykvqpmpa ikkvgiglff tlveyvcdet qrnpptrqff
     1681 tscieilgqv fisgtkseck rllqtilqnr rlctllspyf tpvaspsefv tlyekvvafl
     1741 sednsdvvfm lltkfdltqw lsvakpplse rtqllesihl alnacglepe edilmpfnif
     1801 ckhwtnllqy qfpdhysdfl rlfvqssseq llspdcwkas lqalgcdsav teqgsfkksd
     1861 saegpvvrdg aktllsieqv retiewlsts fcklrlasvd frtfglfskw tpyvaavntf
     1921 lqylikrltd tevanlaqep igssrilaal qslysviagl frpwilvlek edassqpcyp
     1981 wlesdtpvas tmvclfadci kllhesfkek llpshhgalw lhlmhycecc tapkmpefil
     2041 yafhtefkrl pwkemhpdqm lmeeffkier gspkscflfl gyvlcevnwv svlsdawnpn
     2101 phpqthsmiv cllymmvlla keeqligeee splinllgqt sslpwqlvgi ssyesiisyc
     2161 nshyppsvil akdagaeliv kllkisagfg tssdshihld atlkcrvyir qvvqflstle
     2221 qsgkitlavl eqemaklldd vvifnppdmd lqtrhlalss lftetlmmln nssittaesl
     2281 rgslrrwihs rvqgllampl ltaachslas vrhmaettea citsyfskds phhqelgwgp
     2341 ilaslqvpel tmeeflqecl slgsyltlyv yllqclntdq tlanemkill tiskwleqvy
     2401 pssakeeakl flwwhkamql slvqleqddp vliesvirtl lsiqvrqsql aeerltsgil
     2461 gaiglgrrsp lsprfrvvar slsafllvqi paesqvrlka gseprlsqka qqalsaleam
     2521 ssnkqymdyq eqlsqaclfi khpehclqdg nnllsllvnt lypevhflds ir
//
LOCUS       XP_041325622            2572 aa            linear   VRT 06-MAY-2021
DEFINITION  ectopic P granules protein 5 homolog isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325622
VERSION     XP_041325622.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469688.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2572
                     /product="ectopic P granules protein 5 homolog isoform X3"
                     /calculated_mol_wt=291252
     CDS             1..2572
                     /gene="EPG5"
                     /coded_by="XM_041469688.1:57..7775"
                     /db_xref="GeneID:121354793"
ORIGIN      
        1 maeavrpprr arsrpkekkk ksseepqvqe pddvflppvp egssqagrvq vehpgeftei
       61 qlrdeadnrr tindvsdipq sslspanega lavtleppkd aeevkadpsq eecvenieks
      121 kldkpqspve avasgsrnsd llssafqssa applsvmgfv qgrraesrqd frdplscsse
      181 klslsssqhs ekskarvprp vypdlslels yekptimavk pllhherlyp elpsepelvp
      241 ftreqlkife pcswlenvds yaeefesvah qdrhefyell lnymrcrkql llaeaelqam
      301 ttdcqnvkgr lwtfkeqqkt vqgvcadqck vtghhryqtv elnesvlgel kklfeakaeh
      361 vhqtlalhsy tsvlsrlqve syvyrllsss sllrsvalqq qeqvskqsen lssdlshlke
      421 cisvlfsftr rviedpqfhs dllmwlqrlv svlqrigcpg dhlflfnhil rcpagisewa
      481 cpfiqikvlg npsgvfhfmq slallmspvk nrvdfmchmk pserksssss gkesgnwtlv
      541 deggeededp etswillled dliallsqfp fhelfqqflg ftsegayfpe ktspqkmmki
      601 fafanslvel lsvgletfnr aryrqfvkri gqlikmtlch vsdhwaqyvs gnkqygsveh
      661 pysveklqle fdelffravl hvlkakrlgv wlfmsempyg tlsssmlwrl ffvmhcaene
      721 hleqlcstlq padykrrlkd pehlaqfeky lqsmncseei cllttfaqma qtkradided
      781 fikivvleiy evsyvslstr etfskvgrel lgaiasihtq iisvlldrir etiekvgmvs
      841 lylfkelply lwkpssseia lirdwllnys ltavenklac iileglnwgf geqqntlhld
      901 pavhsevalm vleayqkyls qkpyagllse sikqvsylas ivrygetpet sfnqwawslv
      961 lrlklhrndr gvqqsglavp acdsaldtae svtlhpllka vkanvpigcy lalamttlgh
     1021 siekfcaegi pllgvlvqsr hlrtvvhvld kilplfyscq yyllkneqfl syvelflhld
     1081 sgvpqgvtqq vthkvtqhlt gvnygenvkl lssmiqthif lsdhpngvgp aavlefwvqv
     1141 ltsqqlwhrd ratlcllddl ckaafqysqe dcvqkllyqq hknalgyhcd kgmlsslvsw
     1201 ivagnvtpsf vegsanssqv wfawtvlnme sifeedsqlr rvvegelvin altpdqalkk
     1261 aqtqlklpiv pslqrlmiyr wahqalatpa dhplmplvwq kffllylhrp gpqyglpvdg
     1321 cigrrffqsa ahvnllnemk qrltevadfh haaskalrve spegsdrspe kascsadylt
     1381 spelhkelvr lcnvlilwle eesfqkgdty ipslpkqyda hrlakvmqnq qdlwmeyvnv
     1441 elihhefqea lnlwlqvqle shptcasage tdftnplsak vrimnnlkkl dtpkpplplq
     1501 tmkapvpvis satlvsqkda iqlmrrdlni lqqhaktaal cesqhvalns eildtvpkly
     1561 vnreeqitlh lecrgisnkg cqgaaqltiq fegkhkneav sqqlhalrke vrqlqaeamk
     1621 ppslgvveaa vhvenfital iniykvqpmp aikkvgiglf ftlveyvcde tqrnpptrqf
     1681 ftscieilgq vfisgtksec krllqtilqn rrlctllspy ftpvaspsef vtlyekvvaf
     1741 lsednsdvvf mlltkfdltq wlsvakppls ertqllesih lalnacglep eedilmpfni
     1801 fckhwtnllq yqfpdhysdf lrlfvqssse qllspdcwka slqalgcdsa vteqgsfkks
     1861 dsaegpvvrd gaktllsieq vretiewlst sfcklrlasv dfrtfglfsk wtpyvaavnt
     1921 flqylikrlt dtevanlaqe pigssrilaa lqslysviag lfrpwilvle kedasqpcyp
     1981 wlesdtpvas tmvclfadci kllhesfkek llpshhgalw lhlmhycecc tapkmpefil
     2041 yafhtefkrl pwkemhpdqm lmeeffkier gspkscflfl gyvlcevnwv svlsdawnpn
     2101 phpqthsmiv cllymmvlla keeqligeee splinllgqt sslpwqlvgi ssyesiisyc
     2161 nshyppsvil akdagaeliv kllkisagfg tssdshihld atlkcrvyir qvvqflstle
     2221 qsgkitlavl eqemaklldd vvifnppdmd lqtrhlalss lftetlmmln nssittaesl
     2281 rgslrrwihs rvqgllampl ltaachslas vrhmaettea citsyfskds phhqelgwgp
     2341 ilaslqvpel tmeeflqecl slgsyltlyv yllqclntdq tlanemkill tiskwleqvy
     2401 pssakeeakl flwwhkamql slvqleqddp vliesvirtl lsiqvrqsql aeerltsgil
     2461 gaiglgrrsp lsprfrvvar slsafllvqi paesqvrlka gseprlsqka qqalsaleam
     2521 ssnkqymdyq eqlsqaclfi khpehclqdg nnllsllvnt lypevhflds ir
//
LOCUS       XP_041325636             426 aa            linear   VRT 06-MAY-2021
DEFINITION  urea transporter 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325636
VERSION     XP_041325636.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469702.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="urea transporter 2-like"
                     /calculated_mol_wt=46818
     Region          64..359
                     /region_name="UT"
                     /note="Urea transporter; pfam03253"
                     /db_xref="CDD:460863"
     CDS             1..426
                     /gene="LOC121354801"
                     /coded_by="XM_041469702.1:1..1281"
                     /db_xref="GeneID:121354801"
ORIGIN      
        1 melgeivvte hpnerqlykk empraqdllw rsgnwihhsf gyltgemney gewmknkpli
       61 vqlvdwilrg tsqvmfvnnp lsgliilvgl fiqspwwmlt gftgttvstl talalsqdrs
      121 siaaglhgyn gilvgllmav ysdkgdyyww llppvavism acpvlssalg sifrkwdlpv
      181 ftlpfnivvt lylaatghyn pffpttlikp iaavpnitws dinvplllqs ipagigqvyg
      241 cgnpwtggif lvallisspl iclhaaigsa vgmfaalsia spfdsiylgl hnyncalaci
      301 aiggmfyalt wqthllslac alfcaysgaa lanalavlgl pvctwpfcls allfllitse
      361 npaiykiplc kvthpeanri yylrmrrras esrreeqkrk eqkpsdgski nsggtplwtp
      421 ksrhah
//
LOCUS       XP_041325652             389 aa            linear   VRT 06-MAY-2021
DEFINITION  urea transporter 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325652
VERSION     XP_041325652.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469718.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="urea transporter 2-like"
                     /calculated_mol_wt=41832
     Region          58..353
                     /region_name="UT"
                     /note="Urea transporter; pfam03253"
                     /db_xref="CDD:460863"
     CDS             1..389
                     /gene="LOC121354804"
                     /coded_by="XM_041469718.1:122..1291"
                     /db_xref="GeneID:121354804"
ORIGIN      
        1 mencvdvkie tngermpmkq nplstggksf cravgyltgd mkdfgtwlkd kplmiqlldw
       61 vlrgisqvmf vnnplsglvi laglllqnpw wtltgcvgtl vstltalilg qdrsaiaagl
      121 ygyngvlvgl lmavfsadgd ynwwlllpva lvsmtcpift salsavfskw dlpvltlpfn
      181 laltlylaas gphnlffptt vihpatatpn iswaeaeitm llrsipvgvg qvygcdnpwt
      241 ggifliglfi ssplicihtv igsavgmlag lslatpfdqi ysglwgynss lscaaiggmf
      301 laltwqthll amacalfsay lgaavthmls vfgvpsgtwp fclsaltfll mttshsaicr
      361 lplskvtype anrayylmmk kheksccea
//
LOCUS       XP_041325665             302 aa            linear   VRT 06-MAY-2021
DEFINITION  sialic acid-binding Ig-like lectin 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041325665
VERSION     XP_041325665.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469731.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="sialic acid-binding Ig-like lectin 15"
                     /calculated_mol_wt=33515
     Region          24..145
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          58..62
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          105..109
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          119..124
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          133..140
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..222
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          161..167
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409570"
     Region          176..180
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409570"
     Region          202..205
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409570"
     Region          209..214
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409570"
     Region          222..225
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409570"
     CDS             1..302
                     /gene="SIGLEC15"
                     /coded_by="XM_041469731.1:2978..3886"
                     /db_xref="GeneID:121354811"
ORIGIN      
        1 mrelglvllc llrlsrkgvq cngwsvhvps dvtgelgkmv ilpctfthpy ktfdraltai
       61 wrikepyngt vifkcvsqss selcrtaish knkykllgnp rhkdlsirvd nltwsdsery
      121 fcrvelagdv qdkyesrngi klhviaapri initvsssrd htfqarctae gepapiltwt
      181 gppysnlsss sssshritke lhslthdgky tctavnshgr aegavyfykf rasdsssfmi
      241 lifvplgikv villailsft afsregqcpg lppstgnqgw mrrqitqegt gfvwgegvlm
      301 is
//
LOCUS       XP_041325679             374 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP synthase subunit alpha, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041325679
VERSION     XP_041325679.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469745.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="ATP synthase subunit alpha, mitochondrial"
                     /calculated_mol_wt=40505
     Region          28..374
                     /region_name="PRK09281"
                     /note="F0F1 ATP synthase subunit alpha; Validated"
                     /db_xref="CDD:236448"
     CDS             1..374
                     /gene="ATP5F1A"
                     /coded_by="XM_041469745.1:92..1216"
                     /db_xref="GeneID:121354815"
ORIGIN      
        1 mlsarvaaal arslprqagl vsrntlagnd rlikegdvvk rtgaivdvpv geellgrvvd
       61 algnpidgkg aiasktrrrv glkapgiipr isvrepmqtg ikavdslvpi grgqreliig
      121 drqtgktsia idtiinqkrf ndgtdekkkl yciyvaigqk rstvaqlvkr ltdadamkyt
      181 ivvsatasda aplqylapys gcsmgeyfrd ngkhaliiyd dlskqavayr qmslllrrpp
      241 greaypgdvf ylhsrllera akmndsfggg sltalpviet qagdvsayip tnvisitdgq
      301 vglphspasl wnlvimiqfy paskitkfes aflahvlsqh qdllstirte gkisdqteak
      361 lkeivtkfls tfea
//
LOCUS       XP_041325693             304 aa            linear   VRT 06-MAY-2021
DEFINITION  HAUS augmin-like complex subunit 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325693
VERSION     XP_041325693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469759.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..304
                     /product="HAUS augmin-like complex subunit 1"
                     /calculated_mol_wt=34863
     CDS             1..304
                     /gene="HAUS1"
                     /coded_by="XM_041469759.1:1..915"
                     /db_xref="GeneID:121354818"
ORIGIN      
        1 mgrgqeygqg qgqkrypags fpgvqhhfth rgevalwlkk lyngvpipvy evnertvdil
       61 hevmkcnevr ekdvmllied mkdraskyea eadywhnilr qtlgffessl seeatndlfd
      121 lvgsaielev entsltsfys alndmtsely ktkskndeme wklkiltkkl tsalmvekhl
      181 ekdveklkts qkaeqakdei hsktlkflqd kskdlririr gaegeliarg lnksltheal
      241 mkssekvaal rkeieplkre vasyldlpps irlarvkvee arrelkalde eltreiealp
      301 feli
//
LOCUS       XP_041325707             334 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-serine-threonine phosphatase-interacting protein 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325707
VERSION     XP_041325707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="proline-serine-threonine phosphatase-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=39072
     Region          15..254
                     /region_name="F-BAR_PSTPIP2"
                     /note="The F-BAR (FES-CIP4 Homology and
                     Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine
                     Phosphatase-Interacting Protein 2; cd07672"
                     /db_xref="CDD:153356"
     Site            order(20,23,30,33..34,37,40..41,44..45,48,52,55,59,83,86,
                     188,192,217,221,224,227..228,231,235,238,242,246,249..250,
                     253)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153356"
     CDS             1..334
                     /gene="PSTPIP2"
                     /coded_by="XM_041469773.1:48..1052"
                     /db_xref="GeneID:121354822"
ORIGIN      
        1 mrearfrdnf wstdltstvg ydsiiqhlnd grknckefed flkeraviee kygkelinls
       61 kkkpcgqtel ntlkrsldvf kqqidnvgqg hiqlaqtlre eakkmedfre kqklhrkkie
      121 limeaihknr nlqykktmea krlyeqrcrd kdeaeqavhr nanlvtqkqq eklflklaqt
      181 ksaledtdrs yqqsvttmek irdewqnehi kaceffetqe cerinyfrna lwlhvnqlsl
      241 gcvqndekye eirkslemcs iekdvdffvn lrktgslapa pvvyenyyna qrnvtparsp
      301 apvpisrrgp lptptsapge pdyatvdgys lvhf
//
LOCUS       XP_041325717             301 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-serine-threonine phosphatase-interacting protein 2 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325717
VERSION     XP_041325717.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469783.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="proline-serine-threonine phosphatase-interacting
                     protein 2 isoform X2"
                     /calculated_mol_wt=35106
     Region          15..221
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(20,23..24,28,30..31,34..35,37..38,48..49,51..52,
                     55..56,58..59,62,86,89..90,180,183..184,186,188,191..192,
                     194..195,198..199,202..203,205..206,209..210,212..213)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     CDS             1..301
                     /gene="PSTPIP2"
                     /coded_by="XM_041469783.1:48..953"
                     /db_xref="GeneID:121354822"
ORIGIN      
        1 mrearfrdnf wstdltstvg ydsiiqhlnd grknckefed flkeraviee kygkelinls
       61 kkkpcgqtel ntlkrsldvf kqqidnvgqg hiqlaqtlre eakkmedfre kqklhrkkie
      121 limeaihknr nlqykktmel flklaqtksa ledtdrsyqq svttmekird ewqnehikac
      181 effetqecer inyfrnalwl hvnqlslgcv qndekyeeir kslemcsiek dvdffvnlrk
      241 tgslapapvv yenyynaqrn vtparspapv pisrrgplpt ptsapgepdy atvdgyslvh
      301 f
//
LOCUS       XP_041325731             264 aa            linear   VRT 06-MAY-2021
DEFINITION  methyl-CpG-binding protein 2, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325731
VERSION     XP_041325731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469797.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508568.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..264
                     /product="methyl-CpG-binding protein 2"
     Region          97..174
                     /region_name="MBD"
                     /note="Methyl-CpG binding domain; smart00391"
                     /db_xref="CDD:128673"
     Site            order(112,114,116,124,126,135,138,142)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238690"
     CDS             1..264
                     /gene="MECP2"
                     /coded_by="XM_041469797.1:<1..797"
                     /codon_start=3
                     /db_xref="GeneID:121354830"
ORIGIN      
        1 trvasprvph vrasiptlsp plltaacphr eekseenlqr ppkakkpkke rkepeqpaae
       61 paeagkaess egagaapaap easaspkqrr siirdrgpmy ddptlpegwt rklkqrksgr
      121 sagkydvyli npqgkafrsk veliayfekv gdtsldpndf dftvtgrgsp srreqrppkk
      181 pkspkgpgtg rgraevsprp fppppvlgsa levvtsrhda ipdcdvitpm tssrtrgrav
      241 lsgpapfpaf aprsatlkma plpr
//
LOCUS       XP_041325745             138 aa            linear   VRT 06-MAY-2021
DEFINITION  maestro heat-like repeat-containing protein family member 1,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325745
VERSION     XP_041325745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469811.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508590.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>138
                     /product="maestro heat-like repeat-containing protein
                     family member 1"
     CDS             1..138
                     /gene="LOC121354836"
                     /coded_by="XM_041469811.1:<1..>415"
                     /db_xref="GeneID:121354836"
ORIGIN      
        1 efpreapgal lellrallrr rphglqeifa hlgpwirspr gaereralgl srallgsflg
       61 elrlssltpf halgsllall aprcsdpvpl pdssltpfha lgsllallap rcsdpvpqir
      121 rhaldcvral lriqlcyq
//
LOCUS       XP_041325759             222 aa            linear   VRT 06-MAY-2021
DEFINITION  hormone-sensitive lipase-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325759
VERSION     XP_041325759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508612.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>222
                     /product="hormone-sensitive lipase-like"
     Region          3..>222
                     /region_name="HSL_N"
                     /note="Hormone-sensitive lipase (HSL) N-terminus;
                     pfam06350"
                     /db_xref="CDD:461882"
     CDS             1..222
                     /gene="LOC121354841"
                     /coded_by="XM_041469825.1:34..>700"
                     /db_xref="GeneID:121354841"
ORIGIN      
        1 mdllqslqll ardnlaffsp pggaaaatag tsrrfadafs allhhgrhlg palahlaqva
       61 pnydldeatp gngyrsliev vqvcldrave rsryvaahrk slffragana aeieavaaal
      121 gqlrallvla akmaeiskpg clfpdgekvr kdqeeeeeee eeeeeegise vvlreystmh
      181 ngcfygrclg fqfvpslrpf lqtlaiglvs fgenyrerdp gi
//
LOCUS       XP_041325768             105 aa            linear   VRT 06-MAY-2021
DEFINITION  nicotinate-nucleotide pyrophosphorylase [carboxylating] [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325768
VERSION     XP_041325768.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469834.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508623.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..105
                     /product="nicotinate-nucleotide pyrophosphorylase
                     [carboxylating]"
                     /calculated_mol_wt=10780
     Region          <5..101
                     /region_name="TIM-like beta/alpha barrel domains"
                     /note="A large family of domains similar to triose
                     phosphate isomerase (TIM) which, in general, share an
                     eight beta/alpha closed barrel structure; cl21457"
                     /db_xref="CDD:473867"
     CDS             1..105
                     /gene="QPRT"
                     /coded_by="XM_041469834.1:58..375"
                     /db_xref="GeneID:121354847"
ORIGIN      
        1 milgvrragg ftrrlevecs saeealaaag agadiimldn lapqelhaaa aqvkaahprv
       61 mveasggivl etlpqflgph idvvsmgclt hsapaldfal rvlep
//
LOCUS       XP_041325781             227 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosyldihydronicotinamide dehydrogenase [quinone]-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325781
VERSION     XP_041325781.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469847.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508645.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..227
                     /product="ribosyldihydronicotinamide dehydrogenase
                     [quinone]-like isoform X1"
                     /calculated_mol_wt=26098
     Region          5..213
                     /region_name="MdaB"
                     /note="Putative NADPH-quinone reductase (modulator of drug
                     activity B) [General function prediction only]; COG2249"
                     /db_xref="CDD:441850"
     CDS             1..227
                     /gene="LOC121354851"
                     /coded_by="XM_041469847.1:469..1152"
                     /db_xref="GeneID:121354851"
ORIGIN      
        1 magkkvlivy ahqepksfng sllkiaveel tkqgcsvtvs dlyamqfepr atrkdivghl
       61 hnseafnygv etweaykrgs lskdlveeqk kvqeadllif qfplfwfsmp ailkgwmdrv
      121 lvqgfaydls kvydggllqd klslfsfttg gskekyairg diryllwpmq hgimhfcgvk
      181 vlephicyap envseekrke mlaawtqrlk slwkeepidc spewyfk
//
LOCUS       XP_041325791             227 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosyldihydronicotinamide dehydrogenase [quinone]-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325791
VERSION     XP_041325791.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469857.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508645.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..227
                     /product="ribosyldihydronicotinamide dehydrogenase
                     [quinone]-like isoform X1"
                     /calculated_mol_wt=26098
     Region          5..213
                     /region_name="MdaB"
                     /note="Putative NADPH-quinone reductase (modulator of drug
                     activity B) [General function prediction only]; COG2249"
                     /db_xref="CDD:441850"
     CDS             1..227
                     /gene="LOC121354851"
                     /coded_by="XM_041469857.1:229..912"
                     /db_xref="GeneID:121354851"
ORIGIN      
        1 magkkvlivy ahqepksfng sllkiaveel tkqgcsvtvs dlyamqfepr atrkdivghl
       61 hnseafnygv etweaykrgs lskdlveeqk kvqeadllif qfplfwfsmp ailkgwmdrv
      121 lvqgfaydls kvydggllqd klslfsfttg gskekyairg diryllwpmq hgimhfcgvk
      181 vlephicyap envseekrke mlaawtqrlk slwkeepidc spewyfk
//
LOCUS       XP_041325800             188 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosyldihydronicotinamide dehydrogenase [quinone]-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325800
VERSION     XP_041325800.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469866.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508645.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="ribosyldihydronicotinamide dehydrogenase
                     [quinone]-like isoform X2"
                     /calculated_mol_wt=21462
     Region          5..>166
                     /region_name="MdaB"
                     /note="Putative NADPH-quinone reductase (modulator of drug
                     activity B) [General function prediction only]; COG2249"
                     /db_xref="CDD:441850"
     CDS             1..188
                     /gene="LOC121354851"
                     /coded_by="XM_041469866.1:468..1034"
                     /db_xref="GeneID:121354851"
ORIGIN      
        1 magkkvlivy ahqepksfng sllkiaveel tkqgcsvtvs dlyamqfepr atrkdivghl
       61 hnseafnygv etweaykrgs lskdlveeqk kvqeadllif qfplfwfsmp ailkgwmdrv
      121 lvqgfaydls kvydggllqd klslfsfttg gskekyairg diryllwpmq rmslrrrgrr
      181 cwlpgpsv
//
LOCUS       XP_041325813            1792 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325813
VERSION     XP_041325813.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469879.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1792
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=199009
     Region          6..65
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          <76..524
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          498..589
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          603..688
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          698..813
                     /region_name="ArfGap_ARAP3"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing protein 3; cd17902"
                     /db_xref="CDD:350089"
     Site            order(713,716,733,736,741)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350089"
     Site            order(713,716,733,736)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350089"
     Region          901..1014
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1027..1120
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1127..1305
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1163,1202,1206,1275,1278..1279,1295)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1163
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1337..1434
                     /region_name="RA_ARAP3"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 3 (ARAP3); cd17228"
                     /db_xref="CDD:340748"
     Region          1433..1552
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..1792
                     /gene="ARAP3"
                     /coded_by="XM_041469879.1:193..5571"
                     /db_xref="GeneID:121354864"
ORIGIN      
        1 msspcgpdsd iadwlatihl eryrdvfkqh gyhvardatl ldshhlqqig itatghrkri
       61 ltlaqqtrml sqsrgrpvag dtrsrgtevl dapqegkdam raepggtsda fgtqqrvtvp
      121 sqappgdkda appalkpvpk prtvfprskp eqglvpvppa rstvpahgpg serapaafvv
      181 legfvpgess tdlespepga apgaavamga iasrlrgrds areetrpsps hgqaletpek
      241 cppsvpcvpp rhrhrglaae pspgsaqegl pgpsaaparr epspcpraas sqpgpgqprl
      301 emvsnviyeg lerpaapaee pggedgprge gvpqppapsp qeharpedrs dpgwpggalp
      361 pipqrptgkp egndppitpy setvfghaal prepkgvgis seqsyeavse leleregcrt
      421 ssecssegrs edeesrsrli eriahndteg ystveaprae gapfslpahl ypdellddlt
      481 ispyasftsl seprptmlsg wldklspqgn yvfqrryvrf dgknlmyfss ekepypkgvi
      541 plsviemars tkdnkfqvit shrifvfrae neaqrnewcs tlqkkvmeqr lvgsrprpan
      601 tahcqksgtl elkgqkskvf aalslpemwl ykseqffkmg iamcfiemrg stireaksrg
      661 felitpsktf sfvaeserek rewmealqea iaemlydyev aekiwsnkan kycadcwaqs
      721 pdwasinlcv vickqcagqh rslgsniskv qslkldtsvw sneivqlfiv lgndranrfw
      781 aarlpateai tpdsgaeqrr efitrkyreg ryrlphphya tqeevlqalc savagpallk
      841 tilqffssse aalasdpaas eaapgadlww gpeskrrrnl sgsphardpg pegvyneitq
      901 pvthsgylyr atappklpga rkckedfqrt wcslerallf fetekctepl ghidsgdlis
      961 lgvnrahqtl tspgpterfr ftlelfltge kvqqlgtdgp etlqawasai gkwftpvsch
     1021 cllgyefqrv gqlrykcmln perwqraffi lqkshlficp aeedgaedsi nlrrlqelsl
     1081 vpptdtpekk ellvlvemgr tfylqglsra dsaawygdiq asaggrgnal rdqqlsrgdi
     1141 piivdsciaf itqyglrheg iyrkngaksr ikvlmeefrr darnvklris dnfiedvtdv
     1201 lkrffreled piftlelhpq wkeaaeissk pqrlerykel ihrlprlnhk tlaalighly
     1261 rvqkcadlnq mstknlsllf apslfqtdgk gehevkvmed lidnyvsifn idedqvsqmd
     1321 lenslittwk dtqlsqagdl iievyleqkv pdccvtlkvs ptmtaeeltn hvlemrnvaa
     1381 sldiwltfea lengelerpl hpkekvleqa lqwcklpeps aayllvrkvp igegsclftg
     1441 akretpkcgl lkcreeppkl lgnkfqeryf virdrrllll kekrsakper ewpldaakvy
     1501 mgirkklkpp aqwgftltld kqqlylvcsg qaelwdwtts ilkaqhddlr pvvlrrrsss
     1561 dlakqkfgtm plvplhgdst datmlsanqt lrrlhtrrtl smffpmkihq dsleeqqeke
     1621 adtdpvyeev gnfpelaald lgqgllaela avppvdrskk pspfpeeppg talrsslpas
     1681 pahkvtgpsv tkavslergl nlesnkapsp glrptktssl ernvepslal grdweqaatp
     1741 essstaetsl elprkrslqp pspisdklmq elssvilkks dgqpagpgqp vt
//
LOCUS       XP_041325822            1792 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325822
VERSION     XP_041325822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469888.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1792
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=199009
     Region          6..65
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          <76..524
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          498..589
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          603..688
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          698..813
                     /region_name="ArfGap_ARAP3"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing protein 3; cd17902"
                     /db_xref="CDD:350089"
     Site            order(713,716,733,736,741)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350089"
     Site            order(713,716,733,736)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350089"
     Region          901..1014
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1027..1120
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1127..1305
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1163,1202,1206,1275,1278..1279,1295)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1163
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1337..1434
                     /region_name="RA_ARAP3"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 3 (ARAP3); cd17228"
                     /db_xref="CDD:340748"
     Region          1433..1552
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..1792
                     /gene="ARAP3"
                     /coded_by="XM_041469888.1:248..5626"
                     /db_xref="GeneID:121354864"
ORIGIN      
        1 msspcgpdsd iadwlatihl eryrdvfkqh gyhvardatl ldshhlqqig itatghrkri
       61 ltlaqqtrml sqsrgrpvag dtrsrgtevl dapqegkdam raepggtsda fgtqqrvtvp
      121 sqappgdkda appalkpvpk prtvfprskp eqglvpvppa rstvpahgpg serapaafvv
      181 legfvpgess tdlespepga apgaavamga iasrlrgrds areetrpsps hgqaletpek
      241 cppsvpcvpp rhrhrglaae pspgsaqegl pgpsaaparr epspcpraas sqpgpgqprl
      301 emvsnviyeg lerpaapaee pggedgprge gvpqppapsp qeharpedrs dpgwpggalp
      361 pipqrptgkp egndppitpy setvfghaal prepkgvgis seqsyeavse leleregcrt
      421 ssecssegrs edeesrsrli eriahndteg ystveaprae gapfslpahl ypdellddlt
      481 ispyasftsl seprptmlsg wldklspqgn yvfqrryvrf dgknlmyfss ekepypkgvi
      541 plsviemars tkdnkfqvit shrifvfrae neaqrnewcs tlqkkvmeqr lvgsrprpan
      601 tahcqksgtl elkgqkskvf aalslpemwl ykseqffkmg iamcfiemrg stireaksrg
      661 felitpsktf sfvaeserek rewmealqea iaemlydyev aekiwsnkan kycadcwaqs
      721 pdwasinlcv vickqcagqh rslgsniskv qslkldtsvw sneivqlfiv lgndranrfw
      781 aarlpateai tpdsgaeqrr efitrkyreg ryrlphphya tqeevlqalc savagpallk
      841 tilqffssse aalasdpaas eaapgadlww gpeskrrrnl sgsphardpg pegvyneitq
      901 pvthsgylyr atappklpga rkckedfqrt wcslerallf fetekctepl ghidsgdlis
      961 lgvnrahqtl tspgpterfr ftlelfltge kvqqlgtdgp etlqawasai gkwftpvsch
     1021 cllgyefqrv gqlrykcmln perwqraffi lqkshlficp aeedgaedsi nlrrlqelsl
     1081 vpptdtpekk ellvlvemgr tfylqglsra dsaawygdiq asaggrgnal rdqqlsrgdi
     1141 piivdsciaf itqyglrheg iyrkngaksr ikvlmeefrr darnvklris dnfiedvtdv
     1201 lkrffreled piftlelhpq wkeaaeissk pqrlerykel ihrlprlnhk tlaalighly
     1261 rvqkcadlnq mstknlsllf apslfqtdgk gehevkvmed lidnyvsifn idedqvsqmd
     1321 lenslittwk dtqlsqagdl iievyleqkv pdccvtlkvs ptmtaeeltn hvlemrnvaa
     1381 sldiwltfea lengelerpl hpkekvleqa lqwcklpeps aayllvrkvp igegsclftg
     1441 akretpkcgl lkcreeppkl lgnkfqeryf virdrrllll kekrsakper ewpldaakvy
     1501 mgirkklkpp aqwgftltld kqqlylvcsg qaelwdwtts ilkaqhddlr pvvlrrrsss
     1561 dlakqkfgtm plvplhgdst datmlsanqt lrrlhtrrtl smffpmkihq dsleeqqeke
     1621 adtdpvyeev gnfpelaald lgqgllaela avppvdrskk pspfpeeppg talrsslpas
     1681 pahkvtgpsv tkavslergl nlesnkapsp glrptktssl ernvepslal grdweqaatp
     1741 essstaetsl elprkrslqp pspisdklmq elssvilkks dgqpagpgqp vt
//
LOCUS       XP_041325831            1790 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325831
VERSION     XP_041325831.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469897.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1790
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 3 isoform X2"
                     /calculated_mol_wt=198737
     Region          6..65
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          51..>382
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          496..587
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          601..686
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          696..811
                     /region_name="ArfGap_ARAP3"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing protein 3; cd17902"
                     /db_xref="CDD:350089"
     Site            order(711,714,731,734,739)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350089"
     Site            order(711,714,731,734)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350089"
     Region          899..1012
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1025..1118
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1125..1303
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1161,1200,1204,1273,1276..1277,1293)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1161
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1335..1432
                     /region_name="RA_ARAP3"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 3 (ARAP3); cd17228"
                     /db_xref="CDD:340748"
     Region          1431..1550
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..1790
                     /gene="ARAP3"
                     /coded_by="XM_041469897.1:193..5565"
                     /db_xref="GeneID:121354864"
ORIGIN      
        1 msspcgpdsd iadwlatihl eryrdvfkqh gyhvardatl ldshhlqqig itatghrkri
       61 ltlaqqtrml sqsrgrpvag dtrsrgtevl dapqegkdam raepggtsda fgtqqrvtvp
      121 sqappgdkda appalkpvpk prtvfprskp eqglvpvppa rstvpahgpg serapaafvv
      181 legfvpgess tdlespepga apgaavamga iasrlrgrds areetrpsps hgqaletpek
      241 cppsvpcvpp rhrhrglaae pspgsaqegl pgpsaaparr epspcpraas sqpgpgqprl
      301 emvsnviyeg lerpaapaee pggedgprge gvpqppapsp qeharpedsp gwpggalppi
      361 pqrptgkpeg ndppitpyse tvfghaalpr epkgvgisse qsyeavsele leregcrtss
      421 ecssegrsed eesrsrlier iahndtegys tveapraega pfslpahlyp dellddltis
      481 pyasftslse prptmlsgwl dklspqgnyv fqrryvrfdg knlmyfssek epypkgvipl
      541 sviemarstk dnkfqvitsh rifvfraene aqrnewcstl qkkvmeqrlv gsrprpanta
      601 hcqksgtlel kgqkskvfaa lslpemwlyk seqffkmgia mcfiemrgst ireaksrgfe
      661 litpsktfsf vaeserekre wmealqeaia emlydyevae kiwsnkanky cadcwaqspd
      721 wasinlcvvi ckqcagqhrs lgsniskvqs lkldtsvwsn eivqlfivlg ndranrfwaa
      781 rlpateaitp dsgaeqrref itrkyregry rlphphyatq eevlqalcsa vagpallkti
      841 lqffssseaa lasdpaasea apgadlwwgp eskrrrnlsg sphardpgpe gvyneitqpv
      901 thsgylyrat appklpgark ckedfqrtwc slerallffe tekcteplgh idsgdlislg
      961 vnrahqtlts pgpterfrft lelfltgekv qqlgtdgpet lqawasaigk wftpvschcl
     1021 lgyefqrvgq lrykcmlnpe rwqraffilq kshlficpae edgaedsinl rrlqelslvp
     1081 ptdtpekkel lvlvemgrtf ylqglsrads aawygdiqas aggrgnalrd qqlsrgdipi
     1141 ivdsciafit qyglrhegiy rkngaksrik vlmeefrrda rnvklrisdn fiedvtdvlk
     1201 rffreledpi ftlelhpqwk eaaeisskpq rlerykelih rlprlnhktl aalighlyrv
     1261 qkcadlnqms tknlsllfap slfqtdgkge hevkvmedli dnyvsifnid edqvsqmdle
     1321 nslittwkdt qlsqagdlii evyleqkvpd ccvtlkvspt mtaeeltnhv lemrnvaasl
     1381 diwltfeale ngelerplhp kekvleqalq wcklpepsaa yllvrkvpig egsclftgak
     1441 retpkcgllk creeppkllg nkfqeryfvi rdrrllllke krsakperew pldaakvymg
     1501 irkklkppaq wgftltldkq qlylvcsgqa elwdwttsil kaqhddlrpv vlrrrsssdl
     1561 akqkfgtmpl vplhgdstda tmlsanqtlr rlhtrrtlsm ffpmkihqds leeqqekead
     1621 tdpvyeevgn fpelaaldlg qgllaelaav ppvdrskkps pfpeeppgta lrsslpaspa
     1681 hkvtgpsvtk avslerglnl esnkapspgl rptktssler nvepslalgr dweqaatpes
     1741 sstaetslel prkrslqpps pisdklmqel ssvilkksdg qpagpgqpvt
//
LOCUS       XP_041325841            1779 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325841
VERSION     XP_041325841.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469907.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1779
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 3 isoform X3"
                     /calculated_mol_wt=197306
     Region          6..65
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          <76..524
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          498..589
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          603..688
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          698..813
                     /region_name="ArfGap_ARAP3"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing protein 3; cd17902"
                     /db_xref="CDD:350089"
     Site            order(713,716,733,736,741)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350089"
     Site            order(713,716,733,736)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350089"
     Region          901..1014
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1027..1120
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1127..1305
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1163,1202,1206,1275,1278..1279,1295)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1163
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1337..1434
                     /region_name="RA_ARAP3"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 3 (ARAP3); cd17228"
                     /db_xref="CDD:340748"
     Region          1433..1552
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..1779
                     /gene="ARAP3"
                     /coded_by="XM_041469907.1:193..5532"
                     /db_xref="GeneID:121354864"
ORIGIN      
        1 msspcgpdsd iadwlatihl eryrdvfkqh gyhvardatl ldshhlqqig itatghrkri
       61 ltlaqqtrml sqsrgrpvag dtrsrgtevl dapqegkdam raepggtsda fgtqqrvtvp
      121 sqappgdkda appalkpvpk prtvfprskp eqglvpvppa rstvpahgpg serapaafvv
      181 legfvpgess tdlespepga apgaavamga iasrlrgrds areetrpsps hgqaletpek
      241 cppsvpcvpp rhrhrglaae pspgsaqegl pgpsaaparr epspcpraas sqpgpgqprl
      301 emvsnviyeg lerpaapaee pggedgprge gvpqppapsp qeharpedrs dpgwpggalp
      361 pipqrptgkp egndppitpy setvfghaal prepkgvgis seqsyeavse leleregcrt
      421 ssecssegrs edeesrsrli eriahndteg ystveaprae gapfslpahl ypdellddlt
      481 ispyasftsl seprptmlsg wldklspqgn yvfqrryvrf dgknlmyfss ekepypkgvi
      541 plsviemars tkdnkfqvit shrifvfrae neaqrnewcs tlqkkvmeqr lvgsrprpan
      601 tahcqksgtl elkgqkskvf aalslpemwl ykseqffkmg iamcfiemrg stireaksrg
      661 felitpsktf sfvaeserek rewmealqea iaemlydyev aekiwsnkan kycadcwaqs
      721 pdwasinlcv vickqcagqh rslgsniskv qslkldtsvw sneivqlfiv lgndranrfw
      781 aarlpateai tpdsgaeqrr efitrkyreg ryrlphphya tqeevlqalc savagpallk
      841 tilqffssse aalasdpaas eaapgadlww gpeskrrrnl sgsphardpg pegvyneitq
      901 pvthsgylyr atappklpga rkckedfqrt wcslerallf fetekctepl ghidsgdlis
      961 lgvnrahqtl tspgpterfr ftlelfltge kvqqlgtdgp etlqawasai gkwftpvsch
     1021 cllgyefqrv gqlrykcmln perwqraffi lqkshlficp aeedgaedsi nlrrlqelsl
     1081 vpptdtpekk ellvlvemgr tfylqglsra dsaawygdiq asaggrgnal rdqqlsrgdi
     1141 piivdsciaf itqyglrheg iyrkngaksr ikvlmeefrr darnvklris dnfiedvtdv
     1201 lkrffreled piftlelhpq wkeaaeissk pqrlerykel ihrlprlnhk tlaalighly
     1261 rvqkcadlnq mstknlsllf apslfqtdgk gehevkvmed lidnyvsifn idedqvsqmd
     1321 lenslittwk dtqlsqagdl iievyleqkv pdccvtlkvs ptmtaeeltn hvlemrnvaa
     1381 sldiwltfea lengelerpl hpkekvleqa lqwcklpeps aayllvrkvp igegsclftg
     1441 akretpkcgl lkcreeppkl lgnkfqeryf virdrrllll kekrsakper ewpldaakvy
     1501 mgirkklkpp aqwgftltld kqqlylvcsg qaelwdwtts ilkaqhddlr pvvlrrrsss
     1561 dlakqkfgtm plvplhgdst datmlsanqt lpmkihqdsl eeqqekeadt dpvyeevgnf
     1621 pelaaldlgq gllaelaavp pvdrskkpsp fpeeppgtal rsslpaspah kvtgpsvtka
     1681 vslerglnle snkapspglr ptktsslern vepslalgrd weqaatpess staetslelp
     1741 rkrslqppsp isdklmqels svilkksdgq pagpgqpvt
//
LOCUS       XP_041325853             857 aa            linear   VRT 06-MAY-2021
DEFINITION  F-BAR and double SH3 domains protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325853
VERSION     XP_041325853.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469919.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..857
                     /product="F-BAR and double SH3 domains protein 1 isoform
                     X1"
                     /calculated_mol_wt=91951
     Region          164..425
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(169,172..173,177,179..180,183..184,186..187,
                     197..198,200..201,204..205,207..208,211,243,246..247,370,
                     373..374,376,379,382..383,385..386,389..390,393..394,
                     396..397,400..401,403..404)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          622..676
                     /region_name="SH3_FCHSD_1"
                     /note="First Src Homology 3 domain of FCH and double SH3
                     domains proteins; cd11761"
                     /db_xref="CDD:212695"
     Site            order(629,631,634,638,657..658,672,674..675)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212695"
     Region          715..772
                     /region_name="SH3_FCHSD1_2"
                     /note="Second Src Homology 3 domain of FCH and double SH3
                     domains protein 1; cd11895"
                     /db_xref="CDD:212828"
     Site            order(720,722,725,729,751..752,765,767..768)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212828"
     CDS             1..857
                     /gene="FCHSD1"
                     /coded_by="XM_041469919.1:16..2589"
                     /db_xref="GeneID:121354886"
ORIGIN      
        1 msfplislcs hvplspspcp iapptraapt trrrcsprga glagrdgrgs pagrvkgrgr
       61 grgrlgarsg acpslcggrg lvgqarlgac lwrvgawsvw gvvsgrgaag pavpgsahag
      121 rgggdrgpap gsgsapgqrs daaaaaqgls gtfpqvkltq elrvhlleql sglqskqqrd
      181 aelledirsy skqratidre ygqalqrlas qfvkrdwqrg rgesgdsrsv aavwkgvieg
      241 tahagqvrvt asesyralaa eaarsarlsk ertlkkgier lqkaqvelle tvkeldkakk
      301 qfshlrrsse vakdkaadve arlrksdrri fhtkaslqkl sakfsarlae hsrqlagvqn
      361 eysfalvsas ahlehyqrve lpaamqaldg dlyerlrehl saasrtevet cratrdwfqg
      421 vveasarvcr eqdlllflqd hpafslapeq rfqltgveev sggghyskvg saqpapchrr
      481 vlaqvcllpp addgasleke arrwatrvar ehknrahsee vlqrlearrq qgleaevaav
      541 erqmeevren irkaevsrvk aearlallra agldvdtwla gamvgtgeet ptgldpaefd
      601 dyedsdepde ddepgpaart ypytcrvifg yqgcqadels isqgeeleii edgdaeewvk
      661 arnkagqvgy vpekyllslg cdsgaglgpp gpcalhrqls simaaelvle pgawlvraly
      721 dyegqspeel sfpegaiirv lpraagevdd gfwtgdfdgr vgvfpslvve eltgareaag
      781 qelpspsppp fsppglapga slvpspapet alggcrqdgt gsgqsspdla atrlrplrap
      841 ppppgrapep dpelhfs
//
LOCUS       XP_041325863             832 aa            linear   VRT 06-MAY-2021
DEFINITION  F-BAR and double SH3 domains protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325863
VERSION     XP_041325863.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469929.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..832
                     /product="F-BAR and double SH3 domains protein 1 isoform
                     X2"
                     /calculated_mol_wt=89406
     Region          164..425
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(169,172..173,177,179..180,183..184,186..187,
                     197..198,200..201,204..205,207..208,211,243,246..247,370,
                     373..374,376,379,382..383,385..386,389..390,393..394,
                     396..397,400..401,403..404)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          597..651
                     /region_name="SH3_FCHSD_1"
                     /note="First Src Homology 3 domain of FCH and double SH3
                     domains proteins; cd11761"
                     /db_xref="CDD:212695"
     Site            order(604,606,609,613,632..633,647,649..650)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212695"
     Region          690..747
                     /region_name="SH3_FCHSD1_2"
                     /note="Second Src Homology 3 domain of FCH and double SH3
                     domains protein 1; cd11895"
                     /db_xref="CDD:212828"
     Site            order(695,697,700,704,726..727,740,742..743)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212828"
     CDS             1..832
                     /gene="FCHSD1"
                     /coded_by="XM_041469929.1:16..2514"
                     /db_xref="GeneID:121354886"
ORIGIN      
        1 msfplislcs hvplspspcp iapptraapt trrrcsprga glagrdgrgs pagrvkgrgr
       61 grgrlgarsg acpslcggrg lvgqarlgac lwrvgawsvw gvvsgrgaag pavpgsahag
      121 rgggdrgpap gsgsapgqrs daaaaaqgls gtfpqvkltq elrvhlleql sglqskqqrd
      181 aelledirsy skqratidre ygqalqrlas qfvkrdwqrg rgesgdsrsv aavwkgvieg
      241 tahagqvrvt asesyralaa eaarsarlsk ertlkkgier lqkaqvelle tvkeldkakk
      301 qfshlrrsse vakdkaadve arlrksdrri fhtkaslqkl sakfsarlae hsrqlagvqn
      361 eysfalvsas ahlehyqrve lpaamqaldg dlyerlrehl saasrtevet cratrdwfqg
      421 vveasarvcr eqdlllflqd hpafslapeq rfqltgveev cllppaddga slekearrwa
      481 trvarehknr ahseevlqrl earrqqglea evaaverqme evrenirkae vsrvkaearl
      541 allraagldv dtwlagamvg tgeetptgld paefddyeds depdeddepg paartypytc
      601 rvifgyqgcq adelsisqge eleiiedgda eewvkarnka gqvgyvpeky llslgcdsga
      661 glgppgpcal hrqlssimaa elvlepgawl vralydyegq speelsfpeg aiirvlpraa
      721 gevddgfwtg dfdgrvgvfp slvveeltga reaagqelps pspppfsppg lapgaslvps
      781 papetalggc rqdgtgsgqs spdlaatrlr plrapppppg rapepdpelh fs
//
LOCUS       XP_041325873             709 aa            linear   VRT 06-MAY-2021
DEFINITION  F-BAR and double SH3 domains protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325873
VERSION     XP_041325873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469939.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="F-BAR and double SH3 domains protein 1 isoform
                     X3"
                     /calculated_mol_wt=77681
     Region          16..277
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(21,24..25,29,31..32,35..36,38..39,49..50,52..53,
                     56..57,59..60,63,95,98..99,222,225..226,228,231,234..235,
                     237..238,241..242,245..246,248..249,252..253,255..256)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          474..528
                     /region_name="SH3_FCHSD_1"
                     /note="First Src Homology 3 domain of FCH and double SH3
                     domains proteins; cd11761"
                     /db_xref="CDD:212695"
     Site            order(481,483,486,490,509..510,524,526..527)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212695"
     Region          567..624
                     /region_name="SH3_FCHSD1_2"
                     /note="Second Src Homology 3 domain of FCH and double SH3
                     domains protein 1; cd11895"
                     /db_xref="CDD:212828"
     Site            order(572,574,577,581,603..604,617,619..620)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212828"
     CDS             1..709
                     /gene="FCHSD1"
                     /coded_by="XM_041469939.1:126..2255"
                     /db_xref="GeneID:121354886"
ORIGIN      
        1 mqppprkvkl tqelrvhlle qlsglqskqq rdaelledir syskqratid reygqalqrl
       61 asqfvkrdwq rgrgesgdsr svaavwkgvi egtahagqvr vtasesyral aaeaarsarl
      121 skertlkkgi erlqkaqvel letvkeldka kkqfshlrrs sevakdkaad vearlrksdr
      181 rifhtkaslq klsakfsarl aehsrqlagv qneysfalvs asahlehyqr velpaamqal
      241 dgdlyerlre hlsaasrtev etcratrdwf qgvveasarv creqdlllfl qdhpafslap
      301 eqrfqltgve evsggghysk vgsaqpapch rrvlaqvcll ppaddgasle kearrwatrv
      361 arehknrahs eevlqrlear rqqgleaeva averqmeevr enirkaevsr vkaearlall
      421 raagldvdtw lagamvgtge etptgldpae fddyedsdep deddepgpaa rtypytcrvi
      481 fgyqgcqade lsisqgeele iiedgdaeew vkarnkagqv gyvpekylls lgcdsgaglg
      541 ppgpcalhrq lssimaaelv lepgawlvra lydyegqspe elsfpegaii rvlpraagev
      601 ddgfwtgdfd grvgvfpslv veeltgarea agqelpspsp ppfsppglap gaslvpspap
      661 etalggcrqd gtgsgqsspd laatrlrplr apppppgrap epdpelhfs
//
LOCUS       XP_041325880             684 aa            linear   VRT 06-MAY-2021
DEFINITION  F-BAR and double SH3 domains protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325880
VERSION     XP_041325880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469946.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="F-BAR and double SH3 domains protein 1 isoform
                     X4"
                     /calculated_mol_wt=75136
     Region          16..277
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(21,24..25,29,31..32,35..36,38..39,49..50,52..53,
                     56..57,59..60,63,95,98..99,222,225..226,228,231,234..235,
                     237..238,241..242,245..246,248..249,252..253,255..256)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          449..503
                     /region_name="SH3_FCHSD_1"
                     /note="First Src Homology 3 domain of FCH and double SH3
                     domains proteins; cd11761"
                     /db_xref="CDD:212695"
     Site            order(456,458,461,465,484..485,499,501..502)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212695"
     Region          542..599
                     /region_name="SH3_FCHSD1_2"
                     /note="Second Src Homology 3 domain of FCH and double SH3
                     domains protein 1; cd11895"
                     /db_xref="CDD:212828"
     Site            order(547,549,552,556,578..579,592,594..595)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212828"
     CDS             1..684
                     /gene="FCHSD1"
                     /coded_by="XM_041469946.1:126..2180"
                     /db_xref="GeneID:121354886"
ORIGIN      
        1 mqppprkvkl tqelrvhlle qlsglqskqq rdaelledir syskqratid reygqalqrl
       61 asqfvkrdwq rgrgesgdsr svaavwkgvi egtahagqvr vtasesyral aaeaarsarl
      121 skertlkkgi erlqkaqvel letvkeldka kkqfshlrrs sevakdkaad vearlrksdr
      181 rifhtkaslq klsakfsarl aehsrqlagv qneysfalvs asahlehyqr velpaamqal
      241 dgdlyerlre hlsaasrtev etcratrdwf qgvveasarv creqdlllfl qdhpafslap
      301 eqrfqltgve evcllppadd gaslekearr watrvarehk nrahseevlq rlearrqqgl
      361 eaevaaverq meevrenirk aevsrvkaea rlallraagl dvdtwlagam vgtgeetptg
      421 ldpaefddye dsdepdedde pgpaartypy tcrvifgyqg cqadelsisq geeleiiedg
      481 daeewvkarn kagqvgyvpe kyllslgcds gaglgppgpc alhrqlssim aaelvlepga
      541 wlvralydye gqspeelsfp egaiirvlpr aagevddgfw tgdfdgrvgv fpslvveelt
      601 gareaagqel pspspppfsp pglapgaslv pspapetalg gcrqdgtgsg qsspdlaatr
      661 lrplrapppp pgrapepdpe lhfs
//
LOCUS       XP_041325893             428 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325893
VERSION     XP_041325893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469959.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..428
                     /product="histone deacetylase 3"
                     /calculated_mol_wt=48788
     Region          3..383
                     /region_name="HDAC3"
                     /note="Histone deacetylase 3 (HDAC3); cd10005"
                     /db_xref="CDD:212529"
     Site            order(134..135,143..144,170,172,259,266,296,298)
                     /site_type="active"
                     /db_xref="CDD:212529"
     CDS             1..428
                     /gene="HDAC3"
                     /coded_by="XM_041469959.1:109..1395"
                     /db_xref="GeneID:121354901"
ORIGIN      
        1 maktvayfyd pdvgnfhyga ghpmkphrla lthslvlhyg lykkmivfkp yqasqhdmcr
       61 fhsedyidfl qrvspnnmqg ftkslnafnv gddcpvfpgl fefcsrytga slqgatqlnn
      121 kicdiainwa gglhhakkfe asgfcyvndi vigilellky hprvlyidid ihhgdgvqea
      181 fyltdrvmtv sfhkygnyff pgtgdmyevg aesgryycln vplrdgiddq sykhlfqpvi
      241 nqvvdyyqpt civlqcgads lgcdrlgcfn lsirghgecv eyvksfnipl lvlggggytv
      301 rnvarcwtye tsllvdepis delpyseyfe yfapdftlhp dvstrienqn srqyldqirq
      361 tifenlkmln hapsvqihdv psdllsydrt depdpeergs eenysrpeap nefydgdhdn
      421 dkesdvei
//
LOCUS       XP_041325905             422 aa            linear   VRT 06-MAY-2021
DEFINITION  RELT-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325905
VERSION     XP_041325905.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469971.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="RELT-like protein 2 isoform X1"
                     /calculated_mol_wt=44577
     Region          <30..60
                     /region_name="RELT"
                     /note="Tumour necrosis factor receptor superfamily member
                     19; pfam12606"
                     /db_xref="CDD:403713"
     CDS             1..422
                     /gene="RELL2"
                     /coded_by="XM_041469971.1:1142..2410"
                     /db_xref="GeneID:121354911"
ORIGIN      
        1 msdyhdphdg esdpqhgitv vfllvlvffi mglvgflich vlkkkgyrcr tfrdeldpdd
       61 kdgveelqdd eaeknddtve kivrciiqne gehflgrpra vlttladafl ffslssanve
      121 alkemlgene gdvpvpvpsl chhsssqdgg pphhhtvhlg stqapcihcs rrkrhplqrq
      181 grskegksrm hpgettvfsv grfrvthigk kpsvqeqqdg alpagsrqps teelerssem
      241 lqreralngt vptgglqnga iptgtqsgrs aeqslsaspa antpassgtr dsrragagsg
      301 tagsgtvglg tagsgpvglg tagslqdags apgsssrqrr lmslpvlgas spnipgelar
      361 egagicleei glasadevsd ihgslslqeq adelgrdens rkqsggedgk qqepsaaeqd
      421 rv
//
LOCUS       XP_041325914             422 aa            linear   VRT 06-MAY-2021
DEFINITION  RELT-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325914
VERSION     XP_041325914.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469980.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="RELT-like protein 2 isoform X1"
                     /calculated_mol_wt=44577
     Region          <30..60
                     /region_name="RELT"
                     /note="Tumour necrosis factor receptor superfamily member
                     19; pfam12606"
                     /db_xref="CDD:403713"
     CDS             1..422
                     /gene="RELL2"
                     /coded_by="XM_041469980.1:148..1416"
                     /db_xref="GeneID:121354911"
ORIGIN      
        1 msdyhdphdg esdpqhgitv vfllvlvffi mglvgflich vlkkkgyrcr tfrdeldpdd
       61 kdgveelqdd eaeknddtve kivrciiqne gehflgrpra vlttladafl ffslssanve
      121 alkemlgene gdvpvpvpsl chhsssqdgg pphhhtvhlg stqapcihcs rrkrhplqrq
      181 grskegksrm hpgettvfsv grfrvthigk kpsvqeqqdg alpagsrqps teelerssem
      241 lqreralngt vptgglqnga iptgtqsgrs aeqslsaspa antpassgtr dsrragagsg
      301 tagsgtvglg tagsgpvglg tagslqdags apgsssrqrr lmslpvlgas spnipgelar
      361 egagicleei glasadevsd ihgslslqeq adelgrdens rkqsggedgk qqepsaaeqd
      421 rv
//
LOCUS       XP_041325923             412 aa            linear   VRT 06-MAY-2021
DEFINITION  RELT-like protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325923
VERSION     XP_041325923.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469989.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..412
                     /product="RELT-like protein 2 isoform X2"
                     /calculated_mol_wt=43777
     Region          <30..60
                     /region_name="RELT"
                     /note="Tumour necrosis factor receptor superfamily member
                     19; pfam12606"
                     /db_xref="CDD:403713"
     CDS             1..412
                     /gene="RELL2"
                     /coded_by="XM_041469989.1:1146..2384"
                     /db_xref="GeneID:121354911"
ORIGIN      
        1 msdyhdphdg esdpqhgitv vfllvlvffi mglvgflich vlkkkgyrcr tfrdeldpdd
       61 kdgveelqdd eaeknddtve kivrciiqne gehflgrpra vlttladafl ffslssanve
      121 alkemlgene gdvpvpvpsl chhsssqdgg pphhhtvhlg stqapcihcs rrkrhplqrq
      181 grskegksrm hpgettvfsv grfrvthigk kpsvqeqqdg alpagsrqps teelerssem
      241 lqreralngt vptgglqnga iptgtqsgrs aeqslsaspa antpassgtr dsrragagsg
      301 tagsgpvglg tagslqdags apgsssrqrr lmslpvlgas spnipgelar egagicleei
      361 glasadevsd ihgslslqeq adelgrdens rkqsggedgk qqepsaaeqd rv
//
LOCUS       XP_041325932             396 aa            linear   VRT 06-MAY-2021
DEFINITION  RELT-like protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325932
VERSION     XP_041325932.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469998.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..396
                     /product="RELT-like protein 2 isoform X3"
                     /calculated_mol_wt=41742
     Region          <30..60
                     /region_name="RELT"
                     /note="Tumour necrosis factor receptor superfamily member
                     19; pfam12606"
                     /db_xref="CDD:403713"
     CDS             1..396
                     /gene="RELL2"
                     /coded_by="XM_041469998.1:1137..2327"
                     /db_xref="GeneID:121354911"
ORIGIN      
        1 msdyhdphdg esdpqhgitv vfllvlvffi mglvgflich vlkkkgyrcr tfrdeldpdd
       61 kdgveelqdd eaeknddtve kivrciiqne anvealkeml genegdvpvp vpslchhsss
      121 qdggpphhht vhlgstqapc ihcsrrkrhp lqrqgrskeg ksrmhpgett vfsvgrfrvt
      181 higkkpsvqe qqdgalpags rqpsteeler ssemlqrera lngtvptggl qngaiptgtq
      241 sgrsaeqsls aspaantpas sgtrdsrrag agsgtagsgt vglgtagsgp vglgtagslq
      301 dagsapgsss rqrrlmslpv lgasspnipg elaregagic leeiglasad evsdihgsls
      361 lqeqadelgr densrkqsgg edgkqqepsa aeqdrv
//
LOCUS       XP_041325945             386 aa            linear   VRT 06-MAY-2021
DEFINITION  proteinase-activated receptor 3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325945
VERSION     XP_041325945.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470011.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..386
                     /product="proteinase-activated receptor 3-like"
                     /calculated_mol_wt=42325
     Region          67..336
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          69..93
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320494"
     Region          101..122
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320494"
     Region          139..161
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320494"
     Region          184..200
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320494"
     Region          230..253
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320494"
     Region          270..292
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320494"
     Region          307..332
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320494"
     CDS             1..386
                     /gene="LOC121354930"
                     /coded_by="XM_041470011.1:100..1260"
                     /db_xref="GeneID:121354930"
ORIGIN      
        1 mswrllspas aatcvtllis cawlgsaaqp ssvpkkgral lpltpqeknv csqaseedfl
       61 nstlstrllp alysavllvg lpanalacwv latnfrrcss tifllnlaga dllfvlllpf
      121 kisyhllgnh wpfgdylcra mvaffygnmy ssiffltcig leryisvahp flwkgsswmr
      181 gkvgicvgiw llvglgmspl llrshthhis rlnittchdv lekdtqmffg yyflflvglg
      241 fglpfvlmii syscilarll akggshaqvv rvlalvllvf ilcftpsnvm lfihhllept
      301 gcnngtyisy tlalvlsacn ncfdpfiyfy vsrdfrgwvr daggrclqrl eassgrstek
      361 talplrsseq sqgcqavspc pgdgga
//
LOCUS       XP_041325958             127 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 33 [Pyrgilauda ruficollis].
ACCESSION   XP_041325958
VERSION     XP_041325958.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470024.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..127
                     /product="small integral membrane protein 33"
                     /calculated_mol_wt=13736
     CDS             1..127
                     /gene="SMIM33"
                     /coded_by="XM_041470024.1:1..384"
                     /db_xref="GeneID:121354933"
ORIGIN      
        1 mnasvpgsql rqpelqdtaa ftpvsivksv tkksdalpvi svivvlfvll avfivlvvhy
       61 gpqlrtvqvt lhhepmaqhm dsvlltdwrr ldahgkmgsa gvtchcscnh hlphgsaepn
      121 vieityl
//
LOCUS       XP_041325969             905 aa            linear   VRT 06-MAY-2021
DEFINITION  catenin alpha-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325969
VERSION     XP_041325969.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470035.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..905
                     /product="catenin alpha-1"
                     /calculated_mol_wt=99841
     Region          19..866
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..905
                     /gene="CTNNA1"
                     /coded_by="XM_041470035.1:123..2840"
                     /db_xref="GeneID:121354941"
ORIGIN      
        1 mtavtaanvn fkwdpkslei rtlaverlle plvtqvttlv ntsnkgpsnk krgrskkahv
       61 laasveqate nflekgdkia kesqflkeel vaavedvrkq gdlmksasge faddpcssvk
      121 rgnmvraara llsavtrlli ladmadvykl lvqlkvvedg ilklrnagte qdlgiqykal
      181 kpevdklnim aakrqqelkd vghrdqmaaa rgilqknvpi lytasqaclq hpdvaaykan
      241 rdliykqlqq avsgisnaaq ataaddagqq qggggelaya lnnfdkqiiv dpstfseerf
      301 rpsleerles iisgaalmad ssctrddrre rivaecnavr qalqdllsey mgnagrkers
      361 dalnsaidkm tkktrdlrrq lrkavmdhvs dsfletnvpl lvlieaakng nekevkeyaq
      421 vfrehankli evanlacsis nneegvklvr msasqlealc pqvinaalal aakpqsklaq
      481 enmdlfkeqw erqvrvltda vdditsiddf lavsenhile dvnkcvialq ekdvdgldrt
      541 agairgraar vihvvtsemd nyepgvytek vleatkllsn tvmprfteqv eaavealssd
      601 paqpmdenef idasrlvydg irdirkavlm irtpeeldds dfetedfdvr srtsiqtedd
      661 qliagqsara imaqlpqeqk akiaeqvasf qeekskldae vskwddsgnd iivlakqmcm
      721 immemtdftr gkgplkntsd visaakkiae agsrmdklgr tiadhcpdsa ckqdllaylq
      781 rialychqln icskvkaevq nlggelvvsg vdsamsliqa aknlmnavvq tvkasyvast
      841 kyqksqgmas lnlpavswkm kapekkplvk rekqdetqtk ikrasqkkhv npvqalsefk
      901 amesi
//
LOCUS       XP_041325982             461 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleotide exchange factor SIL1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325982
VERSION     XP_041325982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="nucleotide exchange factor SIL1"
                     /calculated_mol_wt=51993
     Region          134..>181
                     /region_name="Phage_capsid"
                     /note="Phage capsid family; cl46099"
                     /db_xref="CDD:480439"
     Region          221..258
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          225..>318
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          264..296
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..461
                     /gene="SIL1"
                     /coded_by="XM_041470048.1:218..1603"
                     /db_xref="GeneID:121354949"
ORIGIN      
        1 mspwtgllpt tarvslllll gsvlfscssv ghrvpefalt kieesdikdd sgrepgtedd
       61 adpedlevfy ptdqwqtlrp gqavpagshv rlnlqtgere aklpdrekge sdtrekrrrk
      121 slgkvdvdan sftseelkka lakmkeseka erkareeevr kkfrpieqlk eefeklnmki
      181 etdyeimvkl iskfnssast ldekvaslyd leyyvhqvdn akdflsiggl qlvieglnss
      241 easlkehaaf vlgaalssnp kvqieaiegg alqkllvila teqplavrkk alfalssmlr
      301 hfpyaqqqfl klgglqvlrs lfrqkgmepl hvrvvtllyd limekmllqd sqhgeqmeek
      361 iqqyqqvrlv pavveqgwct lvpnllampe hdtrekvlkl vgvlvafcre hyrgdpalgt
      421 tlsllrseye elaaeeqreg dkdgyfrell gsintiiqel r
//
LOCUS       XP_041325990             461 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleotide exchange factor SIL1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325990
VERSION     XP_041325990.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470056.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="nucleotide exchange factor SIL1"
                     /calculated_mol_wt=51993
     Region          134..>181
                     /region_name="Phage_capsid"
                     /note="Phage capsid family; cl46099"
                     /db_xref="CDD:480439"
     Region          221..258
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          225..>318
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          264..296
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..461
                     /gene="SIL1"
                     /coded_by="XM_041470056.1:65..1450"
                     /db_xref="GeneID:121354949"
ORIGIN      
        1 mspwtgllpt tarvslllll gsvlfscssv ghrvpefalt kieesdikdd sgrepgtedd
       61 adpedlevfy ptdqwqtlrp gqavpagshv rlnlqtgere aklpdrekge sdtrekrrrk
      121 slgkvdvdan sftseelkka lakmkeseka erkareeevr kkfrpieqlk eefeklnmki
      181 etdyeimvkl iskfnssast ldekvaslyd leyyvhqvdn akdflsiggl qlvieglnss
      241 easlkehaaf vlgaalssnp kvqieaiegg alqkllvila teqplavrkk alfalssmlr
      301 hfpyaqqqfl klgglqvlrs lfrqkgmepl hvrvvtllyd limekmllqd sqhgeqmeek
      361 iqqyqqvrlv pavveqgwct lvpnllampe hdtrekvlkl vgvlvafcre hyrgdpalgt
      421 tlsllrseye elaaeeqreg dkdgyfrell gsintiiqel r
//
LOCUS       XP_041325999             461 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleotide exchange factor SIL1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325999
VERSION     XP_041325999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470065.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="nucleotide exchange factor SIL1"
                     /calculated_mol_wt=51993
     Region          134..>181
                     /region_name="Phage_capsid"
                     /note="Phage capsid family; cl46099"
                     /db_xref="CDD:480439"
     Region          221..258
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          225..>318
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          264..296
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..461
                     /gene="SIL1"
                     /coded_by="XM_041470065.1:96..1481"
                     /db_xref="GeneID:121354949"
ORIGIN      
        1 mspwtgllpt tarvslllll gsvlfscssv ghrvpefalt kieesdikdd sgrepgtedd
       61 adpedlevfy ptdqwqtlrp gqavpagshv rlnlqtgere aklpdrekge sdtrekrrrk
      121 slgkvdvdan sftseelkka lakmkeseka erkareeevr kkfrpieqlk eefeklnmki
      181 etdyeimvkl iskfnssast ldekvaslyd leyyvhqvdn akdflsiggl qlvieglnss
      241 easlkehaaf vlgaalssnp kvqieaiegg alqkllvila teqplavrkk alfalssmlr
      301 hfpyaqqqfl klgglqvlrs lfrqkgmepl hvrvvtllyd limekmllqd sqhgeqmeek
      361 iqqyqqvrlv pavveqgwct lvpnllampe hdtrekvlkl vgvlvafcre hyrgdpalgt
      421 tlsllrseye elaaeeqreg dkdgyfrell gsintiiqel r
//
LOCUS       XP_041326011             670 aa            linear   VRT 06-MAY-2021
DEFINITION  stress-70 protein, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041326011
VERSION     XP_041326011.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470077.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..670
                     /product="stress-70 protein, mitochondrial"
                     /calculated_mol_wt=72572
     Region          49..664
                     /region_name="dnaK"
                     /note="molecular chaperone DnaK; Provisional; PRK00290"
                     /db_xref="CDD:234715"
     CDS             1..670
                     /gene="HSPA9"
                     /coded_by="XM_041470077.1:298..2310"
                     /db_xref="GeneID:121354964"
ORIGIN      
        1 mlsasrlpll lpraapappa rpaqtfwngl sqnvlraass rkyaseaikg avigidlgtt
       61 nscvavmegk qakvlenseg arttpsvvaf taegerlvgm pakrqavtnp hntfyatkrl
      121 igrrfddsev kkdiknvpfk ivrasngdaw veahgklysp sqigafvlmk mketaenylg
      181 haaknavitv payfndsqrq atkdagqiag lnvlrvinep taaalaygld ksedkviavy
      241 dlgggtfdis vleiqkgvfe vkstngdtfl ggedfdqall qyivkefkre tgvdltkdnm
      301 alqrvrease kakcelsssv qtdinlpylt mdasgpkhln mklsraqfeg ivadlikrtv
      361 apcqkamqda evsksdigev ilvggmtrmp kvqqtvqelf grapskavnp deavaigaai
      421 qggvlagdvt dvllldvtpl slgietlggv ftklinrntt iptkksqvfs taadgqtqve
      481 ikvcqgerem asdnkllgqf tlvgippapr gvpqievtfd idangivhvs akdkgtgreq
      541 qiviqssggl skdeienmvk naekyaeedr rrkerveavn maegiihdte skmeefkdql
      601 padecnklke eiakmrella rkdsetgeni rqaatslqqa slklfemayk kmaseregsg
      661 spgdqkeekq
//
LOCUS       XP_041326024             404 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic peptide chain release factor subunit 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326024
VERSION     XP_041326024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="eukaryotic peptide chain release factor subunit
                     1"
                     /calculated_mol_wt=45332
     Region          1..384
                     /region_name="aRF1/eRF1"
                     /note="peptide chain release factor 1, archaeal and
                     eukaryotic forms; cl42864"
                     /db_xref="CDD:456209"
     CDS             1..404
                     /gene="ETF1"
                     /coded_by="XM_041470090.1:29..1243"
                     /db_xref="GeneID:121354974"
ORIGIN      
        1 misliippkd qisrvakmla defgtasnik srvnrlsvlg aitsvqqrlk lynkvppngl
       61 vvycgtivte egkekkvnid fepfkpints lylcdnkfht ealtallsdd skfgfividg
      121 sgalfgtlqg ntrevlhkft vdlpkkhgrg gqsalrfarl rmekrhnyvr kvaetavqlf
      181 isgdkvnvag lvlagsadfk telsqsdmfd qrlqskvlkl vdisyggeng fnqaielste
      241 vlsnvkfiqe kkligryfde isqdtgkycf gvedtlkale mgaveilivy enldimryvl
      301 hcqgteeeki lyltpeqekd kshftdketg qeheliesmp llewfannyk kfgatleivt
      361 dksqegsqfv kgfggiggil ryrvdfqgme yqggddeffd lddy
//
LOCUS       XP_041326038             404 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic peptide chain release factor subunit 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326038
VERSION     XP_041326038.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470104.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="eukaryotic peptide chain release factor subunit
                     1"
                     /calculated_mol_wt=45332
     Region          1..384
                     /region_name="aRF1/eRF1"
                     /note="peptide chain release factor 1, archaeal and
                     eukaryotic forms; cl42864"
                     /db_xref="CDD:456209"
     CDS             1..404
                     /gene="ETF1"
                     /coded_by="XM_041470104.1:30..1244"
                     /db_xref="GeneID:121354974"
ORIGIN      
        1 misliippkd qisrvakmla defgtasnik srvnrlsvlg aitsvqqrlk lynkvppngl
       61 vvycgtivte egkekkvnid fepfkpints lylcdnkfht ealtallsdd skfgfividg
      121 sgalfgtlqg ntrevlhkft vdlpkkhgrg gqsalrfarl rmekrhnyvr kvaetavqlf
      181 isgdkvnvag lvlagsadfk telsqsdmfd qrlqskvlkl vdisyggeng fnqaielste
      241 vlsnvkfiqe kkligryfde isqdtgkycf gvedtlkale mgaveilivy enldimryvl
      301 hcqgteeeki lyltpeqekd kshftdketg qeheliesmp llewfannyk kfgatleivt
      361 dksqegsqfv kgfggiggil ryrvdfqgme yqggddeffd lddy
//
LOCUS       XP_041326049             517 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat transmembrane neuronal protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326049
VERSION     XP_041326049.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470115.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="leucine-rich repeat transmembrane neuronal
                     protein 2"
                     /calculated_mol_wt=58945
     Region          56..>312
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          66..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          87..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          279..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          284..>351
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     CDS             1..517
                     /gene="LRRTM2"
                     /coded_by="XM_041470115.1:1..1554"
                     /db_xref="GeneID:121354987"
ORIGIN      
        1 mglhfkwplg armlaalyam smvlkmlpal gmacppkcrc ekllfycdsq gfhsvpntte
       61 kgslglslrh nyiselerdq fasfsqltwl hldhnqiatv redsfqglyk lkelvlssnk
      121 ifhlpnttfs qllnlqnldl sfnqlsslhp elfyglrklq tlhlrsnslr tipvrlfwdc
      181 rslefldlst nrlrslarng fagliklrel hlehnqltki nfahflrlss lhtlflqwnk
      241 isnltcgmew twgtlakldl tgneikaidf avfetmpnlk tllmdnnklt tldskilssl
      301 tslttvglsg nlwecspkic alatwlsgfq grwehsilch spdhtqgedi ldavygfqlc
      361 wnlstvvtpv attsytaptt eytkrisssh fhvgdkeipt tagmvvttee qfpepnnaif
      421 tqrvitgtma llfsfffiif ivfisrkccp ptlrrirqcs miqnhrqlrs qtrlhmanms
      481 dqgpyneyep thegpfiiin gygqckcqql pykecev
//
LOCUS       XP_041326061            1179 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-12 [Pyrgilauda ruficollis].
ACCESSION   XP_041326061
VERSION     XP_041326061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470127.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1179
                     /product="protocadherin-12"
                     /calculated_mol_wt=126574
     Region          66..145
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          173..274
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(180..181,237,239,270,272..273)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          285..382
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(289..290,345,347,378,380..381)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          397..490
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(399..400,453,455,486,488..489)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          512..595
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          646..720
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <819..975
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..1179
                     /gene="PCDH12"
                     /coded_by="XM_041470127.1:145..3684"
                     /db_xref="GeneID:121354995"
ORIGIN      
        1 mprpcggped spgmrwpagq pmaarrgrgg sassvlglsr salrlpalww wylflsadaq
       61 evatftvqyr vleevppgtv igslaehfeg gesgeaaetf qlmetpgrfp lhvgsgdgvl
      121 stagrvdreq lcrhsdpcwv sfdvlaaqnp alihvevqvm dindnaprfp tpeleleise
      181 saslrtripl draldadagp narcsyalsp sehfalevvs ssdgtrhael vvvkevdrel
      241 hssfdlvlta tdhgeppksg tavikvivld sndnspvfae sslmvevred aqpgtllvtv
      301 tatdpdqgpn geieyslsrh appevlstfs idartgsill rlpldyeeth ayeldvqard
      361 lganpipahc kvlvkvldvn dnapdvhvtw aarepvlsea lpkdsfvalv tasdpdsgsn
      421 gqvlcslsqg yehfrlkrtn shsfalltna sldrerhaey nltlvvrdmg dlslavlkhl
      481 ticisdvndn apafeeaaye aavaengeap aflltvratd pdlgtngkvt yrildpsalg
      541 lvsvdpitgd vfalqafdye qvrsleflvt aedgghpkla snisirlavl drndnapiit
      601 tpalvggvat isvlvnvdtg ccwvvpgngs tqgatamtns tlvscpanpf lftimardvd
      661 sgingalryd lvggddaglf ildpllgqvs lnasnassla gsqrellvrv sdqgdtplht
      721 larlrllfrr hgafskmsar dpgwpslpvv lliclaallg gcvlllaltl slrkkdkkdg
      781 mayncreaed arrqqqlkkp hrqiqkadih lvpllrgrpr epeppracqe eqpdtatpaa
      841 ggspqaplhl tptlyrtlrn qrtqkgseeq qgtlelpvlq rrpcqphrpk hpvkeaagpp
      901 eaplhgksll kppmgeprvp aeqplgtggs gqpqphqqil rslvrlslva laeqsptgef
      961 amesppvqqi sqlltllhqg qfqpktnyrg nkytakngsr aagldtgldt gldtdclstk
     1021 dsghgeseag drdsdsafel svqqlvgeel etllepqael alkrltaadp awvarlslpl
     1081 tssykdnvfc pdspcspede eaarqekprt fetfgkgaga epggsgtrla stflsemstl
     1141 femilsqkaq vhseagagll rqlsarrhsl glgdaapgl
//
LOCUS       XP_041326075             474 aa            linear   VRT 06-MAY-2021
DEFINITION  death ligand signal enhancer [Pyrgilauda ruficollis].
ACCESSION   XP_041326075
VERSION     XP_041326075.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470141.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="death ligand signal enhancer"
                     /calculated_mol_wt=51533
     Region          <218..372
                     /region_name="TPR"
                     /note="TPR repeat [General function prediction only];
                     COG0790"
                     /db_xref="CDD:440553"
     Region          218..243
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          250..280
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     Region          287..351
                     /region_name="SLR repeat"
                     /note="SLR repeat [structural motif]"
                     /db_xref="CDD:276807"
     CDS             1..474
                     /gene="DELE1"
                     /coded_by="XM_041470141.1:39..1463"
                     /db_xref="GeneID:121355002"
ORIGIN      
        1 mwrllllgrg rcaptparpa cvpglgggrg hsperapacq dgperggrrq plpglvprys
       61 vreavtwgav galllqllrq iaglrslqda rterrlpwrs slhpqpavvt eastgspgeq
      121 lgsqflqkas peavadnsss gipsgqgerq pwaeagefqi pvssgvgpvl hsakgdpaqr
      181 ghleeaafql qqifridisi alnilgiesm raghcrvaft cfklaadrgy skaqfnvglc
      241 yehgrgtekd lekagfyycq aassrhpmaq yryaryllqh gpgspwdrhh kavalleqaa
      301 gagiteaqay lgvfymrglq pqekrglkyl lqaansgdaq srfhvgvcye qglgvqqnma
      361 ealrhyrqsa aagnrqarer lraweqelqd vhtkhpfpsg lrasssspdf wtiepvsagl
      421 hssqpgqcgl tlphswstgt lhvmllssag wscafgartv plelqgwepq hcwq
//
LOCUS       XP_041326087             510 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/WD repeat-containing protein 11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326087
VERSION     XP_041326087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="F-box/WD repeat-containing protein 11"
                     /calculated_mol_wt=58661
     Region          46..84
                     /region_name="Beta-TrCP_D"
                     /note="D domain of beta-TrCP; pfam12125"
                     /db_xref="CDD:463465"
     Region          84..134
                     /region_name="F-box_FBXW1B"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 1B (FBXW1B) and similar proteins; cd22183"
                     /db_xref="CDD:438954"
     Site            order(84..87,90..91,96,98..99,103,106..108,111,113..114,
                     116..120,122..123)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438954"
     Region          211..246
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <217..486
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          252..286
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          291..328
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          335..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          374..408
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          414..457
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          463..485
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..510
                     /gene="FBXW11"
                     /coded_by="XM_041470153.1:94..1626"
                     /db_xref="GeneID:121355007"
ORIGIN      
        1 medqnedesp kkntlwqisn gtssvivsrk rpsegnyeke kdlcikyfdq wsesdqvefv
       61 ehlisrmchy qhghinsylk pmlqrdfita lpeqgldhia enilsyldar slcaaelvck
      121 ewqrvisegm lwkkliermv rtdplwkgls errgwdqylf knrptdgppn sfyrslypki
      181 iqdietiesn wrcgrhnlqr iqcrsenskg vyclqyddek iisglrdnsi kiwdktslec
      241 lkvltghtgs vlclqyderv ivtgssdstv rvwdvntgev lntlihhnea vlhlrfsngl
      301 mvtcskdrsi avwdmasptd itlrrvlvgh raavnvvdfd dkyivsasgd rtikvwstst
      361 cefvrtlngh krgiaclqyr drlvvsgssd ntirlwdiec gaclrvlegh eelvrcirfd
      421 nkrivsgayd gkikvwdlqa aldprapast lclrtlvehs grvfrlqfde fqiissshdd
      481 tiliwdflnv ppsaqnetrs psrtytyisr
//
LOCUS       XP_041326092             510 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/WD repeat-containing protein 11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326092
VERSION     XP_041326092.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470158.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="F-box/WD repeat-containing protein 11"
                     /calculated_mol_wt=58661
     Region          46..84
                     /region_name="Beta-TrCP_D"
                     /note="D domain of beta-TrCP; pfam12125"
                     /db_xref="CDD:463465"
     Region          84..134
                     /region_name="F-box_FBXW1B"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 1B (FBXW1B) and similar proteins; cd22183"
                     /db_xref="CDD:438954"
     Site            order(84..87,90..91,96,98..99,103,106..108,111,113..114,
                     116..120,122..123)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438954"
     Region          211..246
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <217..486
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          252..286
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          291..328
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          335..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          374..408
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          414..457
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          463..485
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..510
                     /gene="FBXW11"
                     /coded_by="XM_041470158.1:38..1570"
                     /db_xref="GeneID:121355007"
ORIGIN      
        1 medqnedesp kkntlwqisn gtssvivsrk rpsegnyeke kdlcikyfdq wsesdqvefv
       61 ehlisrmchy qhghinsylk pmlqrdfita lpeqgldhia enilsyldar slcaaelvck
      121 ewqrvisegm lwkkliermv rtdplwkgls errgwdqylf knrptdgppn sfyrslypki
      181 iqdietiesn wrcgrhnlqr iqcrsenskg vyclqyddek iisglrdnsi kiwdktslec
      241 lkvltghtgs vlclqyderv ivtgssdstv rvwdvntgev lntlihhnea vlhlrfsngl
      301 mvtcskdrsi avwdmasptd itlrrvlvgh raavnvvdfd dkyivsasgd rtikvwstst
      361 cefvrtlngh krgiaclqyr drlvvsgssd ntirlwdiec gaclrvlegh eelvrcirfd
      421 nkrivsgayd gkikvwdlqa aldprapast lclrtlvehs grvfrlqfde fqiissshdd
      481 tiliwdflnv ppsaqnetrs psrtytyisr
//
LOCUS       XP_041326104             341 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily C member 18 [Pyrgilauda ruficollis].
ACCESSION   XP_041326104
VERSION     XP_041326104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="dnaJ homolog subfamily C member 18"
                     /calculated_mol_wt=38876
     Region          64..>169
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          233..331
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..341
                     /gene="DNAJC18"
                     /coded_by="XM_041470170.1:16..1041"
                     /db_xref="GeneID:121355022"
ORIGIN      
        1 mtsapfavts rtagsagpap sspraqdgga grravseglq rpradmtyta eqldgvqrik
       61 rcrdyyeilg vsrdageeel krayrrlalk fhpdknrapg ateafkaign afavlsnpek
      121 rlrydelgsd hehvstgqar hynyytefea ditpeeifnv ffgghfptgn ihmfsnvard
      181 ahyyprrhra erawtqepee eehrpqnsys afiqlmpvfi iiivsvitql matnppyslf
      241 ykssighvvs retehlqvpy yvdknfenny qgaelqelek tvekdyidyi qtscwkekqq
      301 ksdlsnlakl yrderlkqka eslklehcek lssligmhkg g
//
LOCUS       XP_041326117            1225 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326117
VERSION     XP_041326117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1225
                     /product="protocadherin-1 isoform X1"
                     /calculated_mol_wt=134315
     Region          53..156
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(58..59,108,110,152,154..155)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          164..268
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(171..172,231,233,264,266..267)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          277..375
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(283..284,338,340,371,373..374)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          394..494
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(398..399,457,459,490,492..493)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          504..600
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(509..510,563,565,596,598..599)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          609..703
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(615..616,666,668,699,701..702)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          717..804
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          807..1020
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1225
                     /gene="PCDH1"
                     /coded_by="XM_041470183.1:78..3755"
                     /db_xref="GeneID:121355031"
ORIGIN      
        1 mepprdqrag trhgaqrrhh ptplqrrmnp lasclglwll cqlpalalgt ravykvqeeq
       61 ppnsligsla sdyglpdmgh lyklevgapy lrvdgktgdi yttetsidre slrecqhllp
      121 gepcflefev sitnlnanss prllegqiev ldindntpnf aspvltlsip entnvgtlfp
      181 iplamdrdsg pngvasyelm agpeaqelfg lqvaedqdek qpqlivmgnl dreqwdsydl
      241 tikvqdggnp prassallri tildmndnap kfekalyeae lsenspvghs vlqvkandsd
      301 qganaeidys fhqasdmvrr llrldratgl itvqgpidre digtlkfsvm akdkganpks
      361 artqvvvtik dmndnapsie irgiglvthq dgmanisedv pvetavalvq vsdrdegena
      421 vvtcvvagdv pfqlrqaset gsdskkkyfl qtttpldyes vkeytieiva vdsgnpplss
      481 tnslkvqvmd vndnapvfsq sftevafpen nepdelvmev satdadsgsn aklvyslvtd
      541 psskgsftid pdsgeirvka vldreqrery eflvvaedkg spskqgtasv ainvmdrndn
      601 dpkfmlsgyn fsvmenmppl spvgmvtvid adkgenariq lsveqdngdf viqngtgtil
      661 ssisfdreqq stytfrlkav dggdpprsay vgvtinvlde ndnapfitsp snatykhilp
      721 htspgqqvsk vkaedidsgi naeliysitg gnpfelfqis pqsgditlek eilrkhhglh
      781 rlvvrvndkg kpsrhgtalv hfyvnetlan rtlldtlvgh sldtpldidi agdpeyersk
      841 qrsnilfgvi agivavtlvi vlvvlvrycr qreaksgyqa gkketkdlya pkqasksgks
      901 knkvkksksp kppkptedee etglqkslkf nlmndsvsds prihlplnyp pgspdlgrhy
      961 rsnsplpsiq lqpqspsask khqvvqdlpa tntfvgtgdn nstgseqysd ysyrtnpqky
     1021 tnkqlphrrv tfsaasqaqd lqdpsqhsyy dsgleesetp ssksssgpri gplalpedhy
     1081 erttpdgsig emehpendlr plpdvamtgt ctrectefgh sdtcwmpgqs spsrrpknal
     1141 klstfvpyqd rgsqeqvgng sprlseerst kmanlrllpt ysafsnsshe pckdspmeei
     1201 pltqtsdfqp attpsaqttk reiyl
//
LOCUS       XP_041326125            1211 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326125
VERSION     XP_041326125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470191.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1211
                     /product="protocadherin-1 isoform X2"
                     /calculated_mol_wt=132418
     Region          39..142
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(44..45,94,96,138,140..141)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          150..254
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(157..158,217,219,250,252..253)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          263..361
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(269..270,324,326,357,359..360)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          380..480
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(384..385,443,445,476,478..479)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          490..586
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(495..496,549,551,582,584..585)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          595..689
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(601..602,652,654,685,687..688)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          703..790
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          793..1006
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1211
                     /gene="PCDH1"
                     /coded_by="XM_041470191.1:96..3731"
                     /db_xref="GeneID:121355031"
ORIGIN      
        1 mgdssgaapl qrrmnplasc lglwllcqlp alalgtravy kvqeeqppns ligslasdyg
       61 lpdmghlykl evgapylrvd gktgdiytte tsidreslre cqhllpgepc flefevsitn
      121 lnanssprll egqievldin dntpnfaspv ltlsipentn vgtlfpipla mdrdsgpngv
      181 asyelmagpe aqelfglqva edqdekqpql ivmgnldreq wdsydltikv qdggnppras
      241 sallritild mndnapkfek alyeaelsen spvghsvlqv kandsdqgan aeidysfhqa
      301 sdmvrrllrl dratglitvq gpidredigt lkfsvmakdk ganpksartq vvvtikdmnd
      361 napsieirgi glvthqdgma nisedvpvet avalvqvsdr degenavvtc vvagdvpfql
      421 rqasetgsds kkkyflqttt pldyesvkey tieivavdsg npplsstnsl kvqvmdvndn
      481 apvfsqsfte vafpennepd elvmevsatd adsgsnaklv yslvtdpssk gsftidpdsg
      541 eirvkavldr eqreryeflv vaedkgspsk qgtasvainv mdrndndpkf mlsgynfsvm
      601 enmpplspvg mvtvidadkg enariqlsve qdngdfviqn gtgtilssis fdreqqstyt
      661 frlkavdggd pprsayvgvt invldendna pfitspsnat ykhilphtsp gqqvskvkae
      721 didsginael iysitggnpf elfqispqsg ditlekeilr khhglhrlvv rvndkgkpsr
      781 hgtalvhfyv netlanrtll dtlvghsldt pldidiagdp eyerskqrsn ilfgviagiv
      841 avtlvivlvv lvrycrqrea ksgyqagkke tkdlyapkqa sksgksknkv kkskspkppk
      901 ptedeeetgl qkslkfnlmn dsvsdsprih lplnyppgsp dlgrhyrsns plpsiqlqpq
      961 spsaskkhqv vqdlpatntf vgtgdnnstg seqysdysyr tnpqkytnkq lphrrvtfsa
     1021 asqaqdlqdp sqhsyydsgl eesetpssks ssgprigpla lpedhyertt pdgsigemeh
     1081 pendlrplpd vamtgtctre ctefghsdtc wmpgqsspsr rpknalklst fvpyqdrgsq
     1141 eqvgngsprl seerstkman lrllptysaf snsshepckd spmeeipltq tsdfqpattp
     1201 saqttkreiy l
//
LOCUS       XP_041326133            1198 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326133
VERSION     XP_041326133.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470199.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1198
                     /product="protocadherin-1 isoform X3"
                     /calculated_mol_wt=131091
     Region          26..129
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(31..32,81,83,125,127..128)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          137..241
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(144..145,204,206,237,239..240)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          250..348
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(256..257,311,313,344,346..347)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          367..467
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(371..372,430,432,463,465..466)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          477..573
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(482..483,536,538,569,571..572)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          582..676
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(588..589,639,641,672,674..675)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          690..777
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          780..993
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1198
                     /gene="PCDH1"
                     /coded_by="XM_041470199.1:264..3860"
                     /db_xref="GeneID:121355031"
ORIGIN      
        1 mnplasclgl wllcqlpala lgtravykvq eeqppnslig slasdyglpd mghlyklevg
       61 apylrvdgkt gdiyttetsi dreslrecqh llpgepcfle fevsitnlna nssprllegq
      121 ievldindnt pnfaspvltl sipentnvgt lfpiplamdr dsgpngvasy elmagpeaqe
      181 lfglqvaedq dekqpqlivm gnldreqwds ydltikvqdg gnpprassal lritildmnd
      241 napkfekaly eaelsenspv ghsvlqvkan dsdqganaei dysfhqasdm vrrllrldra
      301 tglitvqgpi dredigtlkf svmakdkgan pksartqvvv tikdmndnap sieirgiglv
      361 thqdgmanis edvpvetava lvqvsdrdeg enavvtcvva gdvpfqlrqa setgsdskkk
      421 yflqtttpld yesvkeytie ivavdsgnpp lsstnslkvq vmdvndnapv fsqsftevaf
      481 pennepdelv mevsatdads gsnaklvysl vtdpsskgsf tidpdsgeir vkavldreqr
      541 eryeflvvae dkgspskqgt asvainvmdr ndndpkfmls gynfsvmenm pplspvgmvt
      601 vidadkgena riqlsveqdn gdfviqngtg tilssisfdr eqqstytfrl kavdggdppr
      661 sayvgvtinv ldendnapfi tspsnatykh ilphtspgqq vskvkaedid sginaeliys
      721 itggnpfelf qispqsgdit lekeilrkhh glhrlvvrvn dkgkpsrhgt alvhfyvnet
      781 lanrtlldtl vghsldtpld idiagdpeye rskqrsnilf gviagivavt lvivlvvlvr
      841 ycrqreaksg yqagkketkd lyapkqasks gksknkvkks kspkppkpte deeetglqks
      901 lkfnlmndsv sdsprihlpl nyppgspdlg rhyrsnsplp siqlqpqsps askkhqvvqd
      961 lpatntfvgt gdnnstgseq ysdysyrtnp qkytnkqlph rrvtfsaasq aqdlqdpsqh
     1021 syydsglees etpssksssg prigplalpe dhyerttpdg sigemehpen dlrplpdvam
     1081 tgtctrecte fghsdtcwmp gqsspsrrpk nalklstfvp yqdrgsqeqv gngsprlsee
     1141 rstkmanlrl lptysafsns shepckdspm eeipltqtsd fqpattpsaq ttkreiyl
//
LOCUS       XP_041326141            1198 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326141
VERSION     XP_041326141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1198
                     /product="protocadherin-1 isoform X3"
                     /calculated_mol_wt=131091
     Region          26..129
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(31..32,81,83,125,127..128)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          137..241
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(144..145,204,206,237,239..240)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          250..348
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(256..257,311,313,344,346..347)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          367..467
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(371..372,430,432,463,465..466)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          477..573
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(482..483,536,538,569,571..572)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          582..676
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(588..589,639,641,672,674..675)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          690..777
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          780..993
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1198
                     /gene="PCDH1"
                     /coded_by="XM_041470207.1:196..3792"
                     /db_xref="GeneID:121355031"
ORIGIN      
        1 mnplasclgl wllcqlpala lgtravykvq eeqppnslig slasdyglpd mghlyklevg
       61 apylrvdgkt gdiyttetsi dreslrecqh llpgepcfle fevsitnlna nssprllegq
      121 ievldindnt pnfaspvltl sipentnvgt lfpiplamdr dsgpngvasy elmagpeaqe
      181 lfglqvaedq dekqpqlivm gnldreqwds ydltikvqdg gnpprassal lritildmnd
      241 napkfekaly eaelsenspv ghsvlqvkan dsdqganaei dysfhqasdm vrrllrldra
      301 tglitvqgpi dredigtlkf svmakdkgan pksartqvvv tikdmndnap sieirgiglv
      361 thqdgmanis edvpvetava lvqvsdrdeg enavvtcvva gdvpfqlrqa setgsdskkk
      421 yflqtttpld yesvkeytie ivavdsgnpp lsstnslkvq vmdvndnapv fsqsftevaf
      481 pennepdelv mevsatdads gsnaklvysl vtdpsskgsf tidpdsgeir vkavldreqr
      541 eryeflvvae dkgspskqgt asvainvmdr ndndpkfmls gynfsvmenm pplspvgmvt
      601 vidadkgena riqlsveqdn gdfviqngtg tilssisfdr eqqstytfrl kavdggdppr
      661 sayvgvtinv ldendnapfi tspsnatykh ilphtspgqq vskvkaedid sginaeliys
      721 itggnpfelf qispqsgdit lekeilrkhh glhrlvvrvn dkgkpsrhgt alvhfyvnet
      781 lanrtlldtl vghsldtpld idiagdpeye rskqrsnilf gviagivavt lvivlvvlvr
      841 ycrqreaksg yqagkketkd lyapkqasks gksknkvkks kspkppkpte deeetglqks
      901 lkfnlmndsv sdsprihlpl nyppgspdlg rhyrsnsplp siqlqpqsps askkhqvvqd
      961 lpatntfvgt gdnnstgseq ysdysyrtnp qkytnkqlph rrvtfsaasq aqdlqdpsqh
     1021 syydsglees etpssksssg prigplalpe dhyerttpdg sigemehpen dlrplpdvam
     1081 tgtctrecte fghsdtcwmp gqsspsrrpk nalklstfvp yqdrgsqeqv gngsprlsee
     1141 rstkmanlrl lptysafsns shepckdspm eeipltqtsd fqpattpsaq ttkreiyl
//
LOCUS       XP_041326150            1105 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326150
VERSION     XP_041326150.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470216.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1105
                     /product="protocadherin-1 isoform X4"
                     /calculated_mol_wt=121047
     Region          53..156
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(58..59,108,110,152,154..155)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          164..268
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(171..172,231,233,264,266..267)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          277..375
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(283..284,338,340,371,373..374)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          394..494
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(398..399,457,459,490,492..493)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          504..600
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(509..510,563,565,596,598..599)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          609..703
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(615..616,666,668,699,701..702)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          717..804
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          807..1020
                     /region_name="Protocadherin"
                     /note="pfam08374"
                     /db_xref="CDD:462451"
     CDS             1..1105
                     /gene="PCDH1"
                     /coded_by="XM_041470216.1:78..3395"
                     /db_xref="GeneID:121355031"
ORIGIN      
        1 mepprdqrag trhgaqrrhh ptplqrrmnp lasclglwll cqlpalalgt ravykvqeeq
       61 ppnsligsla sdyglpdmgh lyklevgapy lrvdgktgdi yttetsidre slrecqhllp
      121 gepcflefev sitnlnanss prllegqiev ldindntpnf aspvltlsip entnvgtlfp
      181 iplamdrdsg pngvasyelm agpeaqelfg lqvaedqdek qpqlivmgnl dreqwdsydl
      241 tikvqdggnp prassallri tildmndnap kfekalyeae lsenspvghs vlqvkandsd
      301 qganaeidys fhqasdmvrr llrldratgl itvqgpidre digtlkfsvm akdkganpks
      361 artqvvvtik dmndnapsie irgiglvthq dgmanisedv pvetavalvq vsdrdegena
      421 vvtcvvagdv pfqlrqaset gsdskkkyfl qtttpldyes vkeytieiva vdsgnpplss
      481 tnslkvqvmd vndnapvfsq sftevafpen nepdelvmev satdadsgsn aklvyslvtd
      541 psskgsftid pdsgeirvka vldreqrery eflvvaedkg spskqgtasv ainvmdrndn
      601 dpkfmlsgyn fsvmenmppl spvgmvtvid adkgenariq lsveqdngdf viqngtgtil
      661 ssisfdreqq stytfrlkav dggdpprsay vgvtinvlde ndnapfitsp snatykhilp
      721 htspgqqvsk vkaedidsgi naeliysitg gnpfelfqis pqsgditlek eilrkhhglh
      781 rlvvrvndkg kpsrhgtalv hfyvnetlan rtlldtlvgh sldtpldidi agdpeyersk
      841 qrsnilfgvi agivavtlvi vlvvlvrycr qreaksgyqa gkketkdlya pkqasksgks
      901 knkvkksksp kppkptedee etglqkslkf nlmndsvsds prihlplnyp pgspdlgrhy
      961 rsnsplpsiq lqpqspsask khqvvqdlpa tntfvgtgdn nstgseqysd ysyrtnpqky
     1021 tnkqlphrrv tfsaasqaqd lqdpsqhsyy dsgleesetp ssksssgpri gplalpedhy
     1081 erttpdgsig emehpenesp ersrl
//
LOCUS       XP_041326162             127 aa            linear   VRT 06-MAY-2021
DEFINITION  polyadenylate-binding protein-interacting protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326162
VERSION     XP_041326162.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470228.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..127
                     /product="polyadenylate-binding protein-interacting
                     protein 2"
                     /calculated_mol_wt=14912
     Region          108..123
                     /region_name="PAM2"
                     /note="Ataxin-2 C-terminal region; pfam07145"
                     /db_xref="CDD:429316"
     CDS             1..127
                     /gene="PAIP2"
                     /coded_by="XM_041470228.1:186..569"
                     /db_xref="GeneID:121355063"
ORIGIN      
        1 mkdpsrssts psiisedvii nghsheddnp faeymwmene eefnrqieee lweeefierc
       61 fqemleeeee hewfipardl pqtmdqiqdq fndlvisdss sledlvvksn lnpnakefvp
      121 gvkylni
//
LOCUS       XP_041326166             127 aa            linear   VRT 06-MAY-2021
DEFINITION  polyadenylate-binding protein-interacting protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326166
VERSION     XP_041326166.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470232.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..127
                     /product="polyadenylate-binding protein-interacting
                     protein 2"
                     /calculated_mol_wt=14912
     Region          108..123
                     /region_name="PAM2"
                     /note="Ataxin-2 C-terminal region; pfam07145"
                     /db_xref="CDD:429316"
     CDS             1..127
                     /gene="PAIP2"
                     /coded_by="XM_041470232.1:164..547"
                     /db_xref="GeneID:121355063"
ORIGIN      
        1 mkdpsrssts psiisedvii nghsheddnp faeymwmene eefnrqieee lweeefierc
       61 fqemleeeee hewfipardl pqtmdqiqdq fndlvisdss sledlvvksn lnpnakefvp
      121 gvkylni
//
LOCUS       XP_041326179             192 aa            linear   VRT 06-MAY-2021
DEFINITION  marginal zone B- and B1-cell-specific protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326179
VERSION     XP_041326179.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470245.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="marginal zone B- and B1-cell-specific protein"
                     /calculated_mol_wt=20612
     CDS             1..192
                     /gene="MZB1"
                     /coded_by="XM_041470245.1:4..582"
                     /db_xref="GeneID:121355076"
ORIGIN      
        1 mraalaawlv lsllggtgae dtcgdppaap shsvpapqls peerlsphmp eslrcdacha
       61 iafqieeqls kaegkvgkka lkesdyievl erscsqdwes ygvleldgek rlsgpglprq
      121 qplsvlvsgg pwpsrlsklc hgyvgergea hiygahrrgp aalrqllchg dkgpcagrke
      181 rpdprkalqn el
//
LOCUS       XP_041326193             673 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: solute carrier family 23 member 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326193
VERSION     XP_041326193.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470259.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..673
                     /product="LOW QUALITY PROTEIN: solute carrier family 23
                     member 1"
                     /calculated_mol_wt=71432
     Region          100..597
                     /region_name="UraA"
                     /note="Xanthine/uracil permease [Nucleotide transport and
                     metabolism]; COG2233"
                     /db_xref="CDD:441834"
     CDS             1..673
                     /gene="SLC23A1"
                     /coded_by="XM_041470259.1:1..2022"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons"
                     /db_xref="GeneID:121355083"
ORIGIN      
        1 madpcrgcar rfhnpqpmax pppatatarp gtkvlptaik ppxagtappg trrrmgtrsg
       61 dlaqpqngtl alapagsphs pgkelpvagr qdpgagtrpp rpevdmlyki edvppwylci
      121 llgfqhyltc fsgtiavpfl laeslcvgkd qltvsyligt iftcvgittl iqttvgirlp
      181 lfqasalafl vpaksilale kwrcpseeqi ygnwslplnt shiwqprmre iqgaiivssl
      241 vevvigllgl pgallsyigp ltvtptvsli glsvfqaagd ragshwgisv ltiflivlfa
      301 qylrqvaicl pgyrrghgfv llriqifkmf piilaimlvw licyvltrtg vfpsqpeeyg
      361 ykartdarge ilsvapwfrv pypcqwglpt vtsaavlgmf satlagiies igdyyscarl
      421 agappppvha inrgiftegi sciiagllgt gngstssspn igvlgitkvg srrviqygag
      481 imlllgtigk ftalfaslpd pvlggmfctl fgmitavgls nlqfvdmnss rnlfvlgfam
      541 ffgltlpnyl dshpgaintg vpeldqiltv llttemfvgg tiafvldnti pgteeerglv
      601 qwkagahsds tssaslrsyd fpfgmgvvrs srwlrkvpic pvftgfrarp ggrgtaaaqg
      661 pdgtdggsvc tkv
//
LOCUS       XP_041326209             207 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 18 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326209
VERSION     XP_041326209.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470275.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="fibroblast growth factor 18 isoform X1"
                     /calculated_mol_wt=23925
     Region          53..178
                     /region_name="beta-trefoil_FGF18"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 18 (FGF18) and similar proteins; cd23324"
                     /db_xref="CDD:467010"
     CDS             1..207
                     /gene="FGF18"
                     /coded_by="XM_041470275.1:302..925"
                     /db_xref="GeneID:121355098"
ORIGIN      
        1 mysllsactc lclhflllcf qvqmfaaeen vdfrihvenq trarddvsrk qlrlyqlysr
       61 tsgkhiqvlg rrisakgedg dkyaqllvet dtfgsqvrik gketdfylcm nrkgklvgkp
      121 dgtskecvfi ekvlennyta lmsakysgwy vgftkkgrpr kgpktrenqq dvhfmkrypk
      181 gqmeiqkpfk yttvtkrtkr irptnps
//
LOCUS       XP_041326218             207 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 18 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326218
VERSION     XP_041326218.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470284.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="fibroblast growth factor 18 isoform X1"
                     /calculated_mol_wt=23925
     Region          53..178
                     /region_name="beta-trefoil_FGF18"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 18 (FGF18) and similar proteins; cd23324"
                     /db_xref="CDD:467010"
     CDS             1..207
                     /gene="FGF18"
                     /coded_by="XM_041470284.1:320..943"
                     /db_xref="GeneID:121355098"
ORIGIN      
        1 mysllsactc lclhflllcf qvqmfaaeen vdfrihvenq trarddvsrk qlrlyqlysr
       61 tsgkhiqvlg rrisakgedg dkyaqllvet dtfgsqvrik gketdfylcm nrkgklvgkp
      121 dgtskecvfi ekvlennyta lmsakysgwy vgftkkgrpr kgpktrenqq dvhfmkrypk
      181 gqmeiqkpfk yttvtkrtkr irptnps
//
LOCUS       XP_041326228             185 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 18 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326228
VERSION     XP_041326228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="fibroblast growth factor 18 isoform X2"
                     /calculated_mol_wt=21424
     Region          31..156
                     /region_name="beta-trefoil_FGF18"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 18 (FGF18) and similar proteins; cd23324"
                     /db_xref="CDD:467010"
     CDS             1..185
                     /gene="FGF18"
                     /coded_by="XM_041470294.1:118..675"
                     /db_xref="GeneID:121355098"
ORIGIN      
        1 mmfaaeenvd frihvenqtr arddvsrkql rlyqlysrts gkhiqvlgrr isakgedgdk
       61 yaqllvetdt fgsqvrikgk etdfylcmnr kgklvgkpdg tskecvfiek vlennytalm
      121 sakysgwyvg ftkkgrprkg pktrenqqdv hfmkrypkgq meiqkpfkyt tvtkrtkrir
      181 ptnps
//
LOCUS       XP_041326242             445 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit pi
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326242
VERSION     XP_041326242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470308.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="LOW QUALITY PROTEIN: gamma-aminobutyric acid
                     receptor subunit pi"
                     /calculated_mol_wt=50616
     Region          42..442
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          59..240
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(70,72,78..79,86,103,105,117..118,120,122..123,
                     136..138,140,150,152,154,158,180,240)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349787"
     CDS             1..445
                     /gene="LOC121355114"
                     /coded_by="XM_041470308.1:1..1338"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121355114"
ORIGIN      
        1 mlcryfsffg lclflptqrx vslghgsslh grgttslpgf enltmgynky lrpyfggepv
       61 qiamsldias issisesdmd ytatislrqr wtdprlvfhg nksftldarl vellwvpdty
      121 iveskrsflh dvtvgnrlvr lfsngtvlya lritttvacn mdlskypmdt qtcqlqlesw
      181 gydendvtft wlkgnnsvhg ieklrlsqyt veryhtlvsk sqqetgsypr lilqfelkrn
      241 ilyfiletyv pstllvmlsw vsfwitldsv partcigvtt vlsmttlmig srsslskinc
      301 fikaidvylg icfsfifgal veyavahyss sqkcaakvpe egpaneltee ieevnitnil
      361 knsitsyeqk isftsieiss dnvncsdltm kshekikcvl rnkmhriigy ftiqnpgnvd
      421 hyskllfplf fmvvnvfywa yylyf
//
LOCUS       XP_041326253             295 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleophosmin [Pyrgilauda ruficollis].
ACCESSION   XP_041326253
VERSION     XP_041326253.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470319.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="nucleophosmin"
                     /calculated_mol_wt=32516
     Region          20..119
                     /region_name="Nucleoplasmin"
                     /note="Nucleoplasmin/nucleophosmin domain; pfam03066"
                     /db_xref="CDD:460792"
     Region          246..294
                     /region_name="NPM1-C"
                     /note="Nucleophosmin C-terminal domain; pfam16276"
                     /db_xref="CDD:465081"
     CDS             1..295
                     /gene="NPM1"
                     /coded_by="XM_041470319.1:71..958"
                     /db_xref="GeneID:121355120"
ORIGIN      
        1 medcamdmes mgplrpqtfl fgcelkadke fqfkvddeen ehqlslrtvt lgagakdelh
       61 iveaealdye gnptkvvlas lkmsvqptvs lggfeitppv vlrlkcgsgp vyvsgqhlva
      121 leeepesdde eeddtkivna stkrpasggg aktpqkkpkl aeddedgded eddddddedd
      181 leddeeeika pikkpvreva gknmqkakqn gkdskpstpa sksktpdskk dktltpktpk
      241 vplsleeika kmqasvdkgt tlpklepkfa nyvkncfrte dqkviqalwq wrqtl
//
LOCUS       XP_041326263             302 aa            linear   VRT 06-MAY-2021
DEFINITION  kazal-type serine protease inhibitor domain-containing protein
            1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326263
VERSION     XP_041326263.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470329.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="kazal-type serine protease inhibitor
                     domain-containing protein 1-like"
                     /calculated_mol_wt=33333
     Region          39..93
                     /region_name="IGFBP"
                     /note="Insulin-like growth factor binding protein;
                     pfam00219"
                     /db_xref="CDD:459717"
     Region          <118..150
                     /region_name="KAZAL"
                     /note="Kazal type serine protease inhibitors; smart00280"
                     /db_xref="CDD:197624"
     Region          154..252
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          171..175
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          184..188
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          209..222
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          232..237
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          245..248
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..302
                     /gene="LOC121355130"
                     /coded_by="XM_041470329.1:214..1122"
                     /db_xref="GeneID:121355130"
ORIGIN      
        1 mkhrmvtavl valvqvsqsf palyhrgwwr llregdscgk cdlalcsepk dcpagavldr
       61 cgccpecgnv egqicdldqg nhfygqcgdh lecrldadea rfgevpepqc vcksqesicg
      121 pdgktyenic qfnkayaakr nismkhkgpc esapvisvpp qdiqnytgnd vifgcevsay
      181 pmpqlewkkk gnkmflpgdd thvsvqargg pqkygvtgwl qiqglkksde giyichtknk
      241 hgatyasarl kvidgpspaf aftagsrsvs ysmeyeeyyd nsdeeddeey esgnydnenn
      301 se
//
LOCUS       XP_041326275             266 aa            linear   VRT 06-MAY-2021
DEFINITION  START domain-containing protein 10-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326275
VERSION     XP_041326275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="START domain-containing protein 10-like"
                     /calculated_mol_wt=30616
     Region          5..227
                     /region_name="START_STARD10-like"
                     /note="Lipid-binding START domain of mammalian STARD10 and
                     related proteins; cd08871"
                     /db_xref="CDD:176880"
     Site            order(32..33,40,54,56,68,72,78,81..82,84..85,104,106..109,
                     111,114,116,118,133,150,152..155,157,169,171,173,175,177,
                     179,186,188..190,192..194,197..198,201)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176880"
     CDS             1..266
                     /gene="LOC121355139"
                     /coded_by="XM_041470341.1:1..801"
                     /db_xref="GeneID:121355139"
ORIGIN      
        1 msrggemvyi pddsdfssfr dqceslegwh crynkagvtv wsqgqeesct vqkiktrisc
       61 kdvpaetlyd vlhdtryrrk wdsnmietyd igrltvnadv gyyswkcpsp lknrdfvtlr
      121 swlplgndym iinysvkhpk ypprkdfvra vslqtgylik angdgacily yltqvdprgs
      181 lpkwvvnrvs qfvapkamkk iykaglkype wkrrhdpeyk pwvypeqntl psvslaelsv
      241 qhadslenid etglseehls tsdhea
//
LOCUS       XP_041326289             861 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-C5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326289
VERSION     XP_041326289.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470355.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..861
                     /product="protocadherin gamma-C5-like"
                     /calculated_mol_wt=92931
     Region          34..116
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          143..242
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(148..149,205,207,238,240..241)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          250..350
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(257..258,313,315,346,348..349)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          363..454
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(365..366,417,419,450,452..453)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          462..564
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(469..470,527,529,560,562..563)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          582..668
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          693..795
                     /region_name="Cadherin_C_2"
                     /note="Cadherin cytoplasmic C-terminal; pfam16492"
                     /db_xref="CDD:465139"
     CDS             1..861
                     /gene="LOC121355146"
                     /coded_by="XM_041470355.1:650..3235"
                     /db_xref="GeneID:121355146"
ORIGIN      
        1 mrtdmesasl qrpawkwqvl slfllcgwgw vsgqihysvv eeselgtvvg nvaqdlglkv
       61 eelpgrrlrl gseeslryfa vrldsgalvv sqrldrerlc gaaascvlsv qvvtenplql
      121 frleveildl ndnspsfpta hrtlriaesa tvaarfples aqdpdvgtna vssyrlspns
      181 hfsldvkqqp dgklfpelvl eraldreeqp evqlvltavd ggsparsgta qitvqvldvn
      241 dnaptfdhtt yrvkvlentp vgavllrvna sdpdegpnge tqysfgvhts dsvrrlfald
      301 prsgevrvsg aldfeesrfy eiyvrahdgg vpemegncvl qvqvedandn ppevlltsll
      361 npvpedtppe tvvglfnvrd rdsgangdvs leispdvpfa irslqnhfsl vtqksldres
      421 tsqyavelia qdggspaltt tltlllnisd vndnpprfsq psydaflqen nppgsllctv
      481 satdpddgvn srlvysiesg qvqdgpissf vhinpdngnl yaqrtfdfel lqvlpvsvvv
      541 rdsgspplya nvtvyifvld qndhpptilh pasdsdvpap qrvplsappg ylvakvtavd
      601 adaghnawls yrllpqstdp slfhvslytg evrtarafqd sdmavqqlvv lvtdngdppl
      661 sttatitval eeaaleesfk pqdflagake kpdltfylii alaaistval atvtllaarc
      721 lrrrgraavs pycccwlses psrdfckhss pklqlssdgt lkymevtlrp tdspsqcyst
      781 cfspgsersd ftflrpcptp atlpresgaf lpaagtlrdr gqvsgnagag pavpgaptar
      841 sprgarsgra gsrraaaarg p
//
LOCUS       XP_041326300            1500 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich basic protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326300
VERSION     XP_041326300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1500
                     /product="proline-rich basic protein 1 isoform X1"
                     /calculated_mol_wt=155048
     Region          <649..1098
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1096..>1237
                     /region_name="COG5099"
                     /note="RNA-binding protein of the Puf family,
                     translational repressor [Translation, ribosomal structure
                     and biogenesis]"
                     /db_xref="CDD:227430"
     Region          1345..1409
                     /region_name="DUF4585"
                     /note="Domain of unknown function (DUF4585); pfam15232"
                     /db_xref="CDD:464574"
     CDS             1..1500
                     /gene="PROB1"
                     /coded_by="XM_041470366.1:307..4809"
                     /db_xref="GeneID:121355153"
ORIGIN      
        1 mghpqrglqg ppapgqprpw dhnrelygvp wdmscglgra vrdeeqgwag gprqvpeagg
       61 gggipamrla saapagarrv hvirgllcaa agssrrdgeg arrssqrprq srpspeqgsp
      121 asaeapgllp atmprgkrdp vllspaelpg peaegpraaa dgrrsaeeee eedghlpglp
      181 rddltksmss ssvssyhsal csdgtetfkd clefldeegs pgraapgrwa pagapgvppp
      241 pgplarpqra qlssaaknsp apgqggrmgp lggdrqpvpa aaaggepavp rqpgamlaga
      301 psdsdevdge vqaltarafr slsglpgarl dmcsshtsss lsnslsedgg rprrwpagag
      361 eprgaatalh grvgwpflag vdgellakeq fecvdveles gearkghgkk rtvpkrqill
      421 krkerketgf gtrgdgpapq pparkeppsk gravgedfrl nyqqfmkaas leagpdrtra
      481 asclvknvla kkmqyeqrik meqkglrgss tssgpssagt dllgdglegk ssslsrsdcs
      541 fsaedlrggg mpvatavaes sattthptkg vvlseatret vcnlrktfne lnqrmkyqev
      601 legrwlpaaa ekhtsericy qraralfeaq pgvgkvldva prfaraprpw pslkeraigp
      661 ihsqslpfka esralpatpp rrpfassraq eartlpqsqp ekppavprrp pspgtipapr
      721 gsppaappkp eekgkgrvpq prdvrklvks syslkfgtag asrgtvapas sgepppatpl
      781 vihctsvrre pppepageev laapgrepap acaegpaktp hsspinitrv qatrrgaaps
      841 eeppaspprr erselrlppr apaaervphv ethlhvlvgr papaaressp aqssavlrae
      901 ktvllppppp spaegeevrg rgssralpaa egpeslgqrp rsgdsrdpra gapggssarp
      961 rpaepaarsa aepggseqrq qqpggrrvsv gsggsaggtg paaplragds seaspgrlpe
     1021 qreawehspq wpaaaepypp aapaensnyl aiperapkst qmpklssvpn pgsasfgtpf
     1081 vpspasasfg apsapnpasa sfgtsmvtnv tgssfgfpsa sslastsfgt plvsssnksf
     1141 gaplvpnlcs tsfgnplvpn assasignpl vpnpssmsfg nplvpnassa sfgnplvpnp
     1201 ssasfgnplv pnassmsfgn plipnpgrss fgsplvsnpa ptslghpsvs svagsffgsp
     1261 fvpnpasapl gtgayplpgg evpwgkpspe pplprppegs aaveppaqph ledaphflrr
     1321 tdgsspsgrs rqspskpfpt avpaqrrmlv dpssgkfyyv epprqpqmkt lydpetgqyl
     1381 evlvppvash tglyqapfnp lvmapgvygp pyasyggfpg lpapppsaps pphpslpaad
     1441 npgtpgsapk gegsssaggp dcgyleslyy iptgmraspg peqpparasp aapegsllrm
//
LOCUS       XP_041326308            1487 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich basic protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326308
VERSION     XP_041326308.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470374.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1487
                     /product="proline-rich basic protein 1 isoform X2"
                     /calculated_mol_wt=153672
     Region          <649..1230
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1332..1396
                     /region_name="DUF4585"
                     /note="Domain of unknown function (DUF4585); pfam15232"
                     /db_xref="CDD:464574"
     CDS             1..1487
                     /gene="PROB1"
                     /coded_by="XM_041470374.1:307..4770"
                     /db_xref="GeneID:121355153"
ORIGIN      
        1 mghpqrglqg ppapgqprpw dhnrelygvp wdmscglgra vrdeeqgwag gprqvpeagg
       61 gggipamrla saapagarrv hvirgllcaa agssrrdgeg arrssqrprq srpspeqgsp
      121 asaeapgllp atmprgkrdp vllspaelpg peaegpraaa dgrrsaeeee eedghlpglp
      181 rddltksmss ssvssyhsal csdgtetfkd clefldeegs pgraapgrwa pagapgvppp
      241 pgplarpqra qlssaaknsp apgqggrmgp lggdrqpvpa aaaggepavp rqpgamlaga
      301 psdsdevdge vqaltarafr slsglpgarl dmcsshtsss lsnslsedgg rprrwpagag
      361 eprgaatalh grvgwpflag vdgellakeq fecvdveles gearkghgkk rtvpkrqill
      421 krkerketgf gtrgdgpapq pparkeppsk gravgedfrl nyqqfmkaas leagpdrtra
      481 asclvknvla kkmqyeqrik meqkglrgss tssgpssagt dllgdglegk ssslsrsdcs
      541 fsaedlrggg mpvatavaes sattthptkg vvlseatret vcnlrktfne lnqrmkyqev
      601 legrwlpaaa ekhtsericy qraralfeaq pgvgkvldva prfaraprpw pslkeraigp
      661 ihsqslpfka esralpatpp rrpfassraq eartlpqsqp ekppavprrp pspgtipapr
      721 gsppaappkp eekgkgrvpq prdvrklvks syslkfgtag asrgtvapas sgepppatpl
      781 vihctsvrre pppepageev laapgrepap acaegpaktp hsspinitrv qatrrgaaps
      841 eeppaspprr erselrlppr apaaervphv ethlhvlvgr papaaressp aqssavlrae
      901 ktvllppppp spaegeevrg rgssralpaa egpeslgqrp rsgdsrdpra gapggssarp
      961 rpaepaarsa aepggseqrq qqpggrrvsv gsggsaggtg paaplragds seaspgrlpe
     1021 qreawehspq wpaaaepypp aapaensnyl aiperapkst qmpklssvpn pgsasfgtpf
     1081 vpspasasfg apsapnpasa sfgtsmvtnv tgssfgfpsa sslastsfgt plvsssnksf
     1141 gaplvpnlcs tsfgnplvpn assasignpl vpnpssasfg splipnpssa sfgsplvpnp
     1201 ssasfgnpli pnpgrssfgs plvsnpapts lghpsvssva gsffgspfvp npasaplgtg
     1261 ayplpggevp wgkpspeppl prppegsaav eppaqphled aphflrrtdg sspsgrsrqs
     1321 pskpfptavp aqrrmlvdps sgkfyyvepp rqpqmktlyd petgqylevl vppvashtgl
     1381 yqapfnplvm apgvygppya syggfpglpa pppsapspph pslpaadnpg tpgsapkgeg
     1441 sssaggpdcg yleslyyipt gmraspgpeq pparaspaap egsllrm
//
LOCUS       XP_041326317            1487 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich basic protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326317
VERSION     XP_041326317.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470383.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1487
                     /product="proline-rich basic protein 1 isoform X3"
                     /calculated_mol_wt=153672
     Region          <649..1230
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1332..1396
                     /region_name="DUF4585"
                     /note="Domain of unknown function (DUF4585); pfam15232"
                     /db_xref="CDD:464574"
     CDS             1..1487
                     /gene="PROB1"
                     /coded_by="XM_041470383.1:307..4770"
                     /db_xref="GeneID:121355153"
ORIGIN      
        1 mghpqrglqg ppapgqprpw dhnrelygvp wdmscglgra vrdeeqgwag gprqvpeagg
       61 gggipamrla saapagarrv hvirgllcaa agssrrdgeg arrssqrprq srpspeqgsp
      121 asaeapgllp atmprgkrdp vllspaelpg peaegpraaa dgrrsaeeee eedghlpglp
      181 rddltksmss ssvssyhsal csdgtetfkd clefldeegs pgraapgrwa pagapgvppp
      241 pgplarpqra qlssaaknsp apgqggrmgp lggdrqpvpa aaaggepavp rqpgamlaga
      301 psdsdevdge vqaltarafr slsglpgarl dmcsshtsss lsnslsedgg rprrwpagag
      361 eprgaatalh grvgwpflag vdgellakeq fecvdveles gearkghgkk rtvpkrqill
      421 krkerketgf gtrgdgpapq pparkeppsk gravgedfrl nyqqfmkaas leagpdrtra
      481 asclvknvla kkmqyeqrik meqkglrgss tssgpssagt dllgdglegk ssslsrsdcs
      541 fsaedlrggg mpvatavaes sattthptkg vvlseatret vcnlrktfne lnqrmkyqev
      601 legrwlpaaa ekhtsericy qraralfeaq pgvgkvldva prfaraprpw pslkeraigp
      661 ihsqslpfka esralpatpp rrpfassraq eartlpqsqp ekppavprrp pspgtipapr
      721 gsppaappkp eekgkgrvpq prdvrklvks syslkfgtag asrgtvapas sgepppatpl
      781 vihctsvrre pppepageev laapgrepap acaegpaktp hsspinitrv qatrrgaaps
      841 eeppaspprr erselrlppr apaaervphv ethlhvlvgr papaaressp aqssavlrae
      901 ktvllppppp spaegeevrg rgssralpaa egpeslgqrp rsgdsrdpra gapggssarp
      961 rpaepaarsa aepggseqrq qqpggrrvsv gsggsaggtg paaplragds seaspgrlpe
     1021 qreawehspq wpaaaepypp aapaensnyl aiperapkst qmpklssvpn pgsasfgtpf
     1081 vpspasasfg apsapnpasa sfgtsmvtnv tgssfgfpsa sslastsfgt plvsssnksf
     1141 gaplvpnlcs tsfgnplvpn assasignpl vpnpssasfg splipnpssa sfgsplvpnp
     1201 ssasfgnpli pnpgrssfgs plvsnpapts lghpsvssva gsffgspfvp npasaplgtg
     1261 ayplpggevp wgkpspeppl prppegsaav eppaqphled aphflrrtdg sspsgrsrqs
     1321 pskpfptavp aqrrmlvdps sgkfyyvepp rqpqmktlyd petgqylevl vppvashtgl
     1381 yqapfnplvm apgvygppya syggfpglpa pppsapspph pslpaadnpg tpgsapkgeg
     1441 sssaggpdcg yleslyyipt gmraspgpeq pparaspaap egsllrm
//
LOCUS       XP_041326329             941 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-B5-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326329
VERSION     XP_041326329.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470395.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..941
                     /product="protocadherin gamma-B5-like isoform X1"
                     /calculated_mol_wt=99997
     Region          34..113
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          139..239
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(145..146,202,204,235,237..238)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          248..344
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(254..255,309,311,340,342..343)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          357..449
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(359..360,412,414,445,447..448)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          458..559
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(464..465,522,524,555,557..558)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          591..677
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <719..784
                     /region_name="Cadherin_C_2"
                     /note="Cadherin cytoplasmic C-terminal; pfam16492"
                     /db_xref="CDD:465139"
     Region          820..924
                     /region_name="Cadherin_tail"
                     /note="Cadherin C-terminal cytoplasmic tail,
                     catenin-binding region; pfam15974"
                     /db_xref="CDD:435046"
     CDS             1..941
                     /gene="LOC121355170"
                     /coded_by="XM_041470395.1:567..3392"
                     /db_xref="GeneID:121355170"
ORIGIN      
        1 mavrrrqrrg pgggrallaa vllcvwgraa aervryaipe elgrgslvgp lardlglsad
       61 elparklrls eekqyftvne engnlyvner ldreemcges atcsvsfeal vhnplnvfrv
      121 evdiqdvndn aprflkekih feiiestppg arfsvdvaed advgsnslqg yqletngffa
      181 vevkenqdgs kfaelvlrra ldresenslr llltaldggd pprtgtaqlw invtdandnp
      241 pvfaqdryrv slredtppgs tvlnisasda dagtnahity gfgktpakvl qkfvvdaesg
      301 tislqekldf edtrgymlll eardggglva hckvevevld vndnapeiti lslsspvped
      361 spagtviall kvrdrdsgen gqvscelsge aplsivassg gsykvvtasa ldreqasehr
      421 vtvvardrgr palwsstelv levsdvndna pvfeeaaysa yvaennaaga lvlrvqarda
      481 dagangrvsy wlaggsagaa gaaplvsvea rsgalyaqrs ldyeqcreft vavraqdggs
      541 parsstatvr vfvldrndna prvlwpaaag ggaaaapgea pgaaatpfev vprsaeagyl
      601 vakvvavdad agrnawlsye lvpasepalf rvglhsgevr taravserda akqrvvavvk
      661 dhgqpalsat atlhvvlaes lqealpelsd rdavshltsd lnlilvvsls vvsllfvstv
      721 ifvfffkfrq srsppifits dkelystlgs kapynycsst lplpysydvc lasesgqkdf
      781 tflrpgaavl sagllsadpg sgtrsekdpp spgssaqqaq pntdwrfsqt qrpgtsgsqn
      841 geeagawpnn qfdtemlqam ilasaneaad gnstlgggng tmglsarygp qftlqhvpdy
      901 rqnvyipgsn atltnaagkr daknaapagg nkkksgkkek k
//
LOCUS       XP_041326337             940 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-B5-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326337
VERSION     XP_041326337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470403.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..940
                     /product="protocadherin gamma-B5-like isoform X2"
                     /calculated_mol_wt=99868
     Region          34..113
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          139..239
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(145..146,202,204,235,237..238)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          248..344
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(254..255,309,311,340,342..343)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          357..449
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(359..360,412,414,445,447..448)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          458..559
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(464..465,522,524,555,557..558)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          591..677
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <719..784
                     /region_name="Cadherin_C_2"
                     /note="Cadherin cytoplasmic C-terminal; pfam16492"
                     /db_xref="CDD:465139"
     Region          820..923
                     /region_name="Cadherin_tail"
                     /note="Cadherin C-terminal cytoplasmic tail,
                     catenin-binding region; pfam15974"
                     /db_xref="CDD:435046"
     CDS             1..940
                     /gene="LOC121355170"
                     /coded_by="XM_041470403.1:573..3395"
                     /db_xref="GeneID:121355170"
ORIGIN      
        1 mavrrrqrrg pgggrallaa vllcvwgraa aervryaipe elgrgslvgp lardlglsad
       61 elparklrls eekqyftvne engnlyvner ldreemcges atcsvsfeal vhnplnvfrv
      121 evdiqdvndn aprflkekih feiiestppg arfsvdvaed advgsnslqg yqletngffa
      181 vevkenqdgs kfaelvlrra ldresenslr llltaldggd pprtgtaqlw invtdandnp
      241 pvfaqdryrv slredtppgs tvlnisasda dagtnahity gfgktpakvl qkfvvdaesg
      301 tislqekldf edtrgymlll eardggglva hckvevevld vndnapeiti lslsspvped
      361 spagtviall kvrdrdsgen gqvscelsge aplsivassg gsykvvtasa ldreqasehr
      421 vtvvardrgr palwsstelv levsdvndna pvfeeaaysa yvaennaaga lvlrvqarda
      481 dagangrvsy wlaggsagaa gaaplvsvea rsgalyaqrs ldyeqcreft vavraqdggs
      541 parsstatvr vfvldrndna prvlwpaaag ggaaaapgea pgaaatpfev vprsaeagyl
      601 vakvvavdad agrnawlsye lvpasepalf rvglhsgevr taravserda akqrvvavvk
      661 dhgqpalsat atlhvvlaes lqealpelsd rdavshltsd lnlilvvsls vvsllfvstv
      721 ifvfffkfrq srsppifits dkelystlgs kapynycsst lplpysydvc lasesgqkdf
      781 tflrpgaavl sagllsadpg sgtrsekdpp spgssaqqaq pntdwrfsqt qrpgtsgsqn
      841 geeagawpnn qfdtemlqam ilasanaadg nstlgggngt mglsarygpq ftlqhvpdyr
      901 qnvyipgsna tltnaagkrd aknaapaggn kkksgkkekk
//
LOCUS       XP_041326345             935 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-C3-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326345
VERSION     XP_041326345.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470411.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..935
                     /product="protocadherin gamma-C3-like isoform X3"
                     /calculated_mol_wt=100885
     Region          32..114
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          141..240
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(146..147,203,205,236,238..239)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          248..348
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(255..256,311,313,344,346..347)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          361..453
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(363..364,416,418,449,451..452)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          461..560
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(468..469,523,525,556,558..559)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          574..665
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          688..770
                     /region_name="Cadherin_C_2"
                     /note="Cadherin cytoplasmic C-terminal; pfam16492"
                     /db_xref="CDD:465139"
     Region          814..918
                     /region_name="Cadherin_tail"
                     /note="Cadherin C-terminal cytoplasmic tail,
                     catenin-binding region; pfam15974"
                     /db_xref="CDD:435046"
     CDS             1..935
                     /gene="LOC121355170"
                     /coded_by="XM_041470411.1:387..3194"
                     /db_xref="GeneID:121355170"
ORIGIN      
        1 mngvavrsrg vttgqvlsll llfgvsdwvs aairyaipee arrgsavgnv vadlaldlgr
       61 lpgrrlrvvs ggnkkyfgvd ltsgallvne ridreelcga lspcslgfei vvenplelys
      121 gtveiqdind ndpvfpsgqa rleisesvaa garfplesaq dpdvginslq ayqlsanpnf
      181 aldvqtrvdg skyaelvlek eldreeqrel nlvltaldgg spprsaqvqi hidvvdandn
      241 apvfnqstyk asvrentpsg tlvarisayd lddgpngdii ysfsshtpak vrelfaldsa
      301 tgelrvkgql dyeetklyei ylqakdkgav pgvahckvlv evvdvndnap evtvtsvysp
      361 vpedaapgtv vallsvtdld shdnglvncf ispgipfmls sslknyytlk tegaldreka
      421 aeynititak dsgspplsav khilvqvsdv ndnaprssqd sydvyvlenn mpgipilnvs
      481 atdpdlgrna hlsytllqgd ttfghlfsin rengtlyllt sldhedqvef nmmvqiqdgg
      541 fpplatnvsv svfvtdlndn aptvlyphpn ttatytdvva pgtpaghmvt kvvavdadag
      601 ynawisytll qatdpslfsv glhngeifta rqlreddape htlvillkdh gepvlstsat
      661 isisvaemvk evltdltdvt pandprrhvt fylilavilv saaffitmls vgifkcykwr
      721 qsrelynssr sttyrtpgpf hhidavrggf tppsfyhqvy lttdsrqsdl lckkpftssp
      781 lgsrqgtirn gepglyhqiv gtasrlptpa eqaqpntdwr fsqtqrpgts gsqngeeaga
      841 wpnnqfdtem lqamilasan eaadgnstlg ggngtmglsa rygpqftlqh vpdyrqnvyi
      901 pgsnatltna agkrdaknaa paggnkkksg kkekk
//
LOCUS       XP_041326354             935 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-C5-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326354
VERSION     XP_041326354.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470420.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..935
                     /product="protocadherin gamma-C5-like isoform X4"
                     /calculated_mol_wt=100314
     Region          28..110
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          135..236
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(142..143,199,201,232,234..235)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          247..346
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(251..252,309,311,342,344..345)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          359..451
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(361..362,414,416,447,449..450)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          461..561
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(466..467,524,526,557,559..560)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          580..663
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          688..784
                     /region_name="Cadherin_C_2"
                     /note="Cadherin cytoplasmic C-terminal; pfam16492"
                     /db_xref="CDD:465139"
     Region          814..918
                     /region_name="Cadherin_tail"
                     /note="Cadherin C-terminal cytoplasmic tail,
                     catenin-binding region; pfam15974"
                     /db_xref="CDD:435046"
     CDS             1..935
                     /gene="LOC121355170"
                     /coded_by="XM_041470420.1:461..3268"
                     /db_xref="GeneID:121355170"
ORIGIN      
        1 mlagrslpwq lplllavlsc lpapscaqlh ysvpedrepg fsvgdlakdl gvevrslaar
       61 nlrlvseggq rhfqvdlaag vllldsrldr ealcgqsptc slhlqlvmen plqlhrvevd
      121 vldvndnapq fpkpevvlei tevanpgtrl plevaedpdm gsnsistyel spskhfalsi
      181 nvrgdgvkmp eivlekaldr ekvpvhhltl taldggnpvk sgtarvtihv ldandnppvc
      241 dppiskvlle envpvgtlvt klnvtdldeg pngdveysfk tsnnapgkft klfsldartg
      301 eirtkapldy eessayeiav rardkgspam eghchlrvel idindnspei vltsvsspvq
      361 edaapgtvia ligvkdsdsg dngqvrlqia kelpfklvss fkehfslvts gpldrekasg
      421 ynitvravds gspqratqkt fylriadvnd napnfsspfd tahvqenslp gtsvfsvsas
      481 dpdegsnakl sysildngmq dapistyfri dqdngtiytv raldyeqdkv fqvpvevkda
      541 gspalsstav vhvfvldend napnivypsv pkgsafhqai palaepgylv tkivavdads
      601 ghnawlsyql qesaealpfq verrsgeirv aqalreseds hrlvvevrdn gtpslsasvv
      661 ivispeensv qdfsksldlp qpssedtnlt lyliislvsi slvscvmfgl aaarclkags
      721 aswtfagccr gtgrkpashf rgqmkpdgfi kyldvggagl tsqaqnytsc fspmseqsdf
      781 lfvkpfshss taetvaayeq vtstlaspcd gqaqpntdwr fsqtqrpgts gsqngeeaga
      841 wpnnqfdtem lqamilasan eaadgnstlg ggngtmglsa rygpqftlqh vpdyrqnvyi
      901 pgsnatltna agkrdaknaa paggnkkksg kkekk
//
LOCUS       XP_041326364             139 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-B4-like isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326364
VERSION     XP_041326364.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470430.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="protocadherin gamma-B4-like isoform X5"
                     /calculated_mol_wt=14482
     Region          18..>112
                     /region_name="Cadherin_tail"
                     /note="Cadherin C-terminal cytoplasmic tail,
                     catenin-binding region; pfam15974"
                     /db_xref="CDD:435046"
     CDS             1..139
                     /gene="LOC121355170"
                     /coded_by="XM_041470430.1:278..697"
                     /db_xref="GeneID:121355170"
ORIGIN      
        1 mngvavrsrg vttgqqaqpn tdwrfsqtqr pgtsgsqnge eagawpnnqf dtemlqamil
       61 asaneaadgn stlgggngtm glsarygpqf tlqhvpdyrq nvyipgsnat ltnaagkrda
      121 knaapaggnk kksgkkekk
//
LOCUS       XP_041326375             294 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell leukemia homeobox protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326375
VERSION     XP_041326375.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470441.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="T-cell leukemia homeobox protein 3"
                     /calculated_mol_wt=32267
     Region          170..226
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..294
                     /gene="TLX3"
                     /coded_by="XM_041470441.1:1..885"
                     /db_xref="GeneID:121355197"
ORIGIN      
        1 mdpprmdppg paqgqhqhep isfgidqiln speqdsappp pprgpdgatf lggpggrgga
       61 pypalpapfp aiaapfedsg sysvnlslap agvirvpahr pipgavpppi ssaipampav
      121 pslgslnfpw messrrfvkd rftaaaaltp ftvtrrighp yqnrtppkrk kprtsfsrvq
      181 icelekrfhr qkylasaera alakalkmtd aqvktwfqnr rtkwrrqtae ereaerqqas
      241 rlmlqlqhda fqkslnesiq pdplclhnss lfalqnlqpw eeesakippv tslv
//
LOCUS       XP_041326386             248 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelial cell-specific chemotaxis regulator isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326386
VERSION     XP_041326386.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470452.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="endothelial cell-specific chemotaxis regulator
                     isoform X1"
                     /calculated_mol_wt=25722
     Region          147..240
                     /region_name="ECSCR"
                     /note="Endothelial cell-specific chemotaxis regulator;
                     pfam15820"
                     /db_xref="CDD:292448"
     CDS             1..248
                     /gene="ECSCR"
                     /coded_by="XM_041470452.1:76..822"
                     /db_xref="GeneID:121355207"
ORIGIN      
        1 mplaslhpll clllllpgst aptnsstptg tgpsqpttps peaknhnsep svkstpltnl
       61 sltsvgqttt akpspttttt ltaiterddk psgnrstaap spaprgqdpm rnestttsat
      121 qgssssqrgt skpitptpns ssqlpeptpt dekspltvaa fgvisfvvil ivvviilvsv
      181 vslrfkcnhs kdsedkqkpg tsmvsescsa dmsqkgnsit lismknintn nsmsyppsek
      241 vslfslaf
//
LOCUS       XP_041326393             242 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelial cell-specific chemotaxis regulator isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326393
VERSION     XP_041326393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="endothelial cell-specific chemotaxis regulator
                     isoform X2"
                     /calculated_mol_wt=25069
     Region          147..240
                     /region_name="ECSCR"
                     /note="Endothelial cell-specific chemotaxis regulator;
                     pfam15820"
                     /db_xref="CDD:292448"
     CDS             1..242
                     /gene="ECSCR"
                     /coded_by="XM_041470459.1:76..804"
                     /db_xref="GeneID:121355207"
ORIGIN      
        1 mplaslhpll clllllpgst aptnsstptg tgpsqpttps peaknhnsep svkstpltnl
       61 sltsvgqttt akpspttttt ltaiterddk psgnrstaap spaprgqdpm rnestttsat
      121 qgssssqrgt skpitptpns ssqlpeptpt dekspltvaa fgvisfvvil ivvviilvsv
      181 vslrfkcnhs kdsedkqkpg tsmvsescsa dmsqkgnsit lismknintn nsmsyppsek
      241 vl
//
LOCUS       XP_041326404             213 aa            linear   VRT 06-MAY-2021
DEFINITION  Kv channel-interacting protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326404
VERSION     XP_041326404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..213
                     /product="Kv channel-interacting protein 1 isoform X1"
                     /calculated_mol_wt=24883
     Region          63..198
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..213
                     /gene="LOC121355219"
                     /coded_by="XM_041470470.1:52..693"
                     /db_xref="GeneID:121355219"
ORIGIN      
        1 mqhicallgr tfvtkciyki edelemttvc hrpegleqle aqtnftkrel qvlyrgfkne
       61 cpsgvvneet fkqiyaqffp hgdasmyahy lfnafdtaqn gsvkfedfvm alsillrgtv
      121 heklrwtfnl ydinkdgyin keemmdivka iydmmgkyty pvlkedaprq hvevffqkmd
      181 knkdgvvtld efiescqedd nimrslqlfe nvm
//
LOCUS       XP_041326410             188 aa            linear   VRT 06-MAY-2021
DEFINITION  Kv channel-interacting protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326410
VERSION     XP_041326410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="Kv channel-interacting protein 1 isoform X2"
                     /calculated_mol_wt=21946
     Region          38..173
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..188
                     /gene="LOC121355219"
                     /coded_by="XM_041470476.1:79..645"
                     /db_xref="GeneID:121355219"
ORIGIN      
        1 mttvchrpeg leqleaqtnf tkrelqvlyr gfknecpsgv vneetfkqiy aqffphgdas
       61 myahylfnaf dtaqngsvkf edfvmalsil lrgtvheklr wtfnlydink dgyinkeemm
      121 divkaiydmm gkytypvlke daprqhvevf fqkmdknkdg vvtldefies cqeddnimrs
      181 lqlfenvm
//
LOCUS       XP_041326420             902 aa            linear   VRT 06-MAY-2021
DEFINITION  matrin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326420
VERSION     XP_041326420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..902
                     /product="matrin-3 isoform X1"
                     /calculated_mol_wt=100268
     Region          281..315
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          388..463
                     /region_name="RRM1_MATR3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     matrin-3; cd12714"
                     /db_xref="CDD:410113"
     Region          487..566
                     /region_name="RRM2_MATR3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     matrin-3; cd12715"
                     /db_xref="CDD:410114"
     Region          853..887
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..902
                     /gene="MATR3"
                     /coded_by="XM_041470486.1:543..3251"
                     /db_xref="GeneID:121355230"
ORIGIN      
        1 msksfqqssl srdsqghgrd lsagigllaa atqslnmpas lgrmnqgtar laslmnlgms
       61 sslnqqgshs alssgstssh nlqsifnigs rgplplssqh rgdadqatni lasfglsard
      121 ldelsryped kitpenlpqi llqlkrrrae egygrdgrss treppyrvpr ddweekrhfr
      181 rdsfddrgps lnpvvdydhg srsqesgyyd rmdyeddrlr dgercrdesf ygetshnyhk
      241 fdseydrmgr gpgperslfe kkrgappnsn iedfhgflpk gyphlcsicd mpvhsnkewn
      301 hhingathsr rcqllleiyp ewnpdsdsgh gmgdpfmlqq stnpapgilg pppppfhlgg
      361 ppvgprgagn gnmqgprhmq kgrvetsrvv himdfqrgkn lryqllqlve pfgiitnhli
      421 lnkineafie msttedaqaa veyysttpal vfgkpvrvhl sqkykrikkp egkpdqktep
      481 pkpelgrvih lsnlphsgys dnavlklaep ygkiknyilm rmksqafiem etredalamv
      541 ehcankalwf qgrcvkvdls ekykklvlri pnkgvellkk dktrkrtysp dskdspsdkk
      601 sktepaqkpe sgnteekake ekqedaaeps gaksgeqteq depslllese dellvdeeea
      661 aallesgssa gedadvanla dvateekkdt pddaavkteg nvavtpgakk klkkryvggf
      721 prsmegfvtl devgdeedsd hqklrksgla akaagkseds laeikvdkie epeqesetle
      781 ngtkseesak aesveasdat taqdtekstq entdpqgeqe tksvlekplv pdefrigpyq
      841 pnipvgvnyv vpktgfyckl cslfytnedv akkthcsslp hyqklkkild kmaedfrqkk
      901 eg
//
LOCUS       XP_041326430             902 aa            linear   VRT 06-MAY-2021
DEFINITION  matrin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326430
VERSION     XP_041326430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..902
                     /product="matrin-3 isoform X1"
                     /calculated_mol_wt=100268
     Region          281..315
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          388..463
                     /region_name="RRM1_MATR3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     matrin-3; cd12714"
                     /db_xref="CDD:410113"
     Region          487..566
                     /region_name="RRM2_MATR3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     matrin-3; cd12715"
                     /db_xref="CDD:410114"
     Region          853..887
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..902
                     /gene="MATR3"
                     /coded_by="XM_041470496.1:267..2975"
                     /db_xref="GeneID:121355230"
ORIGIN      
        1 msksfqqssl srdsqghgrd lsagigllaa atqslnmpas lgrmnqgtar laslmnlgms
       61 sslnqqgshs alssgstssh nlqsifnigs rgplplssqh rgdadqatni lasfglsard
      121 ldelsryped kitpenlpqi llqlkrrrae egygrdgrss treppyrvpr ddweekrhfr
      181 rdsfddrgps lnpvvdydhg srsqesgyyd rmdyeddrlr dgercrdesf ygetshnyhk
      241 fdseydrmgr gpgperslfe kkrgappnsn iedfhgflpk gyphlcsicd mpvhsnkewn
      301 hhingathsr rcqllleiyp ewnpdsdsgh gmgdpfmlqq stnpapgilg pppppfhlgg
      361 ppvgprgagn gnmqgprhmq kgrvetsrvv himdfqrgkn lryqllqlve pfgiitnhli
      421 lnkineafie msttedaqaa veyysttpal vfgkpvrvhl sqkykrikkp egkpdqktep
      481 pkpelgrvih lsnlphsgys dnavlklaep ygkiknyilm rmksqafiem etredalamv
      541 ehcankalwf qgrcvkvdls ekykklvlri pnkgvellkk dktrkrtysp dskdspsdkk
      601 sktepaqkpe sgnteekake ekqedaaeps gaksgeqteq depslllese dellvdeeea
      661 aallesgssa gedadvanla dvateekkdt pddaavkteg nvavtpgakk klkkryvggf
      721 prsmegfvtl devgdeedsd hqklrksgla akaagkseds laeikvdkie epeqesetle
      781 ngtkseesak aesveasdat taqdtekstq entdpqgeqe tksvlekplv pdefrigpyq
      841 pnipvgvnyv vpktgfyckl cslfytnedv akkthcsslp hyqklkkild kmaedfrqkk
      901 eg
//
LOCUS       XP_041326440             626 aa            linear   VRT 06-MAY-2021
DEFINITION  matrin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326440
VERSION     XP_041326440.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470506.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..626
                     /product="matrin-3 isoform X2"
                     /calculated_mol_wt=69245
     Region          112..187
                     /region_name="RRM1_MATR3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     matrin-3; cd12714"
                     /db_xref="CDD:410113"
     Region          211..290
                     /region_name="RRM2_MATR3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     matrin-3; cd12715"
                     /db_xref="CDD:410114"
     Region          577..611
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..626
                     /gene="MATR3"
                     /coded_by="XM_041470506.1:4163..6043"
                     /db_xref="GeneID:121355230"
ORIGIN      
        1 mtlweglpcv aancalftll qewnhhinga thsrrcqlll eiypewnpds dsghgmgdpf
       61 mlqqstnpap gilgpppppf hlggppvgpr gagngnmqgp rhmqkgrvet srvvhimdfq
      121 rgknlryqll qlvepfgiit nhlilnkine afiemstted aqaaveyyst tpalvfgkpv
      181 rvhlsqkykr ikkpegkpdq kteppkpelg rvihlsnlph sgysdnavlk laepygkikn
      241 yilmrmksqa fiemetreda lamvehcank alwfqgrcvk vdlsekykkl vlripnkgve
      301 llkkdktrkr tyspdskdsp sdkksktepa qkpesgntee kakeekqeda aepsgaksge
      361 qteqdepsll lesedellvd eeeaaalles gssagedadv anladvatee kkdtpddaav
      421 ktegnvavtp gakkklkkry vggfprsmeg fvtldevgde edsdhqklrk sglaakaagk
      481 sedslaeikv dkieepeqes etlengtkse esakaesvea sdattaqdte kstqentdpq
      541 geqetksvle kplvpdefri gpyqpnipvg vnyvvpktgf ycklcslfyt nedvakkthc
      601 sslphyqklk kildkmaedf rqkkeg
//
LOCUS       XP_041326449             571 aa            linear   VRT 06-MAY-2021
DEFINITION  matrin-3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326449
VERSION     XP_041326449.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470515.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..571
                     /product="matrin-3 isoform X3"
                     /calculated_mol_wt=63016
     Region          57..132
                     /region_name="RRM1_MATR3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     matrin-3; cd12714"
                     /db_xref="CDD:410113"
     Region          156..235
                     /region_name="RRM2_MATR3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     matrin-3; cd12715"
                     /db_xref="CDD:410114"
     Region          522..556
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..571
                     /gene="MATR3"
                     /coded_by="XM_041470515.1:457..2172"
                     /db_xref="GeneID:121355230"
ORIGIN      
        1 mgdpfmlqqs tnpapgilgp ppppfhlggp pvgprgagng nmqgprhmqk grvetsrvvh
       61 imdfqrgknl ryqllqlvep fgiitnhlil nkineafiem sttedaqaav eyysttpalv
      121 fgkpvrvhls qkykrikkpe gkpdqktepp kpelgrvihl snlphsgysd navlklaepy
      181 gkiknyilmr mksqafieme tredalamve hcankalwfq grcvkvdlse kykklvlrip
      241 nkgvellkkd ktrkrtyspd skdspsdkks ktepaqkpes gnteekakee kqedaaepsg
      301 aksgeqteqd epslllesed ellvdeeeaa allesgssag edadvanlad vateekkdtp
      361 ddaavktegn vavtpgakkk lkkryvggfp rsmegfvtld evgdeedsdh qklrksglaa
      421 kaagksedsl aeikvdkiee peqesetlen gtkseesaka esveasdatt aqdtekstqe
      481 ntdpqgeqet ksvlekplvp defrigpyqp nipvgvnyvv pktgfycklc slfytnedva
      541 kkthcsslph yqklkkildk maedfrqkke g
//
LOCUS       XP_041326457             571 aa            linear   VRT 06-MAY-2021
DEFINITION  matrin-3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326457
VERSION     XP_041326457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508656.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..571
                     /product="matrin-3 isoform X3"
                     /calculated_mol_wt=63016
     Region          57..132
                     /region_name="RRM1_MATR3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     matrin-3; cd12714"
                     /db_xref="CDD:410113"
     Region          156..235
                     /region_name="RRM2_MATR3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     matrin-3; cd12715"
                     /db_xref="CDD:410114"
     Region          522..556
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..571
                     /gene="MATR3"
                     /coded_by="XM_041470523.1:160..1875"
                     /db_xref="GeneID:121355230"
ORIGIN      
        1 mgdpfmlqqs tnpapgilgp ppppfhlggp pvgprgagng nmqgprhmqk grvetsrvvh
       61 imdfqrgknl ryqllqlvep fgiitnhlil nkineafiem sttedaqaav eyysttpalv
      121 fgkpvrvhls qkykrikkpe gkpdqktepp kpelgrvihl snlphsgysd navlklaepy
      181 gkiknyilmr mksqafieme tredalamve hcankalwfq grcvkvdlse kykklvlrip
      241 nkgvellkkd ktrkrtyspd skdspsdkks ktepaqkpes gnteekakee kqedaaepsg
      301 aksgeqteqd epslllesed ellvdeeeaa allesgssag edadvanlad vateekkdtp
      361 ddaavktegn vavtpgakkk lkkryvggfp rsmegfvtld evgdeedsdh qklrksglaa
      421 kaagksedsl aeikvdkiee peqesetlen gtkseesaka esveasdatt aqdtekstqe
      481 ntdpqgeqet ksvlekplvp defrigpyqp nipvgvnyvv pktgfycklc slfytnedva
      541 kkthcsslph yqklkkildk maedfrqkke g
//
LOCUS       XP_041326487             113 aa            linear   VRT 06-MAY-2021
DEFINITION  neuropeptide W-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326487
VERSION     XP_041326487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508666.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>113
                     /product="neuropeptide W-like"
     Region          15..>64
                     /region_name="NPBW"
                     /note="Neuropeptides B and W; pfam15180"
                     /db_xref="CDD:464547"
     CDS             1..113
                     /gene="LOC121355275"
                     /coded_by="XM_041470553.1:64..>402"
                     /db_xref="GeneID:121355275"
ORIGIN      
        1 margqlsggt wgalvllglm lpaapagawy khvaspryht vgrasgllmg vrrspylwrr
       61 elpvepsrhp etptgdsppg tpgrpagesp paaapapppp gpgrllqrll rrg
//
LOCUS       XP_041326495             205 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosome biogenesis protein BOP1-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326495
VERSION     XP_041326495.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470561.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508668.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>205
                     /product="ribosome biogenesis protein BOP1-like"
     Region          <67..>195
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          127..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          168..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..205
                     /gene="LOC121355284"
                     /coded_by="XM_041470561.1:<1..>616"
                     /codon_start=3
                     /db_xref="GeneID:121355284"
ORIGIN      
        1 iiprfpwnpn psvclvavav deqvllvnpg lgdrllvaat dqlldsweap eeervqpvrw
       61 ipaspeergk girllvqhgk pvtqvtwhgk gdywasvvrn pgsrqvlihq ssrrwsqdpf
      121 rkspgmiqcv qfhplrpyfl vasqrsvrvy nllrqeltkk lqsncqwiss mavhpggdnv
      181 icgsydskva wfdldlstrp yrllr
//
LOCUS       XP_041326508             180 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 35 member F6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326508
VERSION     XP_041326508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508679.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..180
                     /product="solute carrier family 35 member F6-like"
                     /calculated_mol_wt=19044
     CDS             1..180
                     /gene="LOC121355295"
                     /coded_by="XM_041470574.1:86..628"
                     /db_xref="GeneID:121355295"
ORIGIN      
        1 mvleekfifs hdvhplravg teglfgfsil alllvplsfi pagrlsgnpr gvledpadaw
       61 cqirrdplil aallgnvgsi sffnfagisv trelsattrt vldslrtllv walslalrwe
      121 rfhplqipgf alllagaaly nglhralrga gnngdsgnng dgaereallg gdgdsdnsqg
//
LOCUS       XP_041326523             353 aa            linear   VRT 06-MAY-2021
DEFINITION  clusterin, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326523
VERSION     XP_041326523.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470589.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508679.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..353
                     /product="clusterin"
     Region          <1..350
                     /region_name="Clusterin"
                     /note="pfam01093"
                     /db_xref="CDD:460061"
     CDS             1..353
                     /gene="CLU"
                     /coded_by="XM_041470589.1:<1..1062"
                     /db_xref="GeneID:121355301"
ORIGIN      
        1 sqleeflnhs spisiwvdge rldsllerde rqerqlqdle erfglledgv qdilqdssqv
       61 qgrlhpffqa pfggfrealr ppvqrlrfpr rfrrfsgdff pffphrhggf qqlfqplfqi
      121 tqrmledaqg swenpsgefe tgrregsaia dggsqipvgl gervaenphq itqrmledaq
      181 gswenpsgef etgrregsai adggsqipip shpipdcgqe dpsqqelreq ledavrvaer
      241 ftsrydsllr efqeemlnts glldqlnrqf gwvsrlanhs mgsdgflqvt tvlskapnpe
      301 dpssppdtqv tvqlfdsepl altvpgdipw ddprfmesva qqalqhfken aie
//
LOCUS       XP_041326535             195 aa            linear   VRT 06-MAY-2021
DEFINITION  single-strand selective monofunctional uracil DNA glycosylase,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326535
VERSION     XP_041326535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470601.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508694.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>195
                     /product="single-strand selective monofunctional uracil
                     DNA glycosylase"
     Region          <10..175
                     /region_name="UDG-like"
                     /note="uracil-DNA glycosylases (UDG) and related enzymes;
                     cl00483"
                     /db_xref="CDD:444933"
     CDS             1..195
                     /gene="SMUG1"
                     /coded_by="XM_041470601.1:<1..>585"
                     /db_xref="GeneID:121355307"
ORIGIN      
        1 tdapspppqv pfgeawhvre wlrvsgavrr pprehpkrpv lglrcprsev sgarfwglir
       61 slcpepraff rhcfvhnlcp llflaasgrn vpppelraae rerllapcga alaavvaalg
      121 vrlvlalgrl aelrarralr daglavpvaw iphpsprnar sargwesear erlrelgvlr
      181 llgvrdgagg ergrl
//
LOCUS       XP_041326550             308 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial inner membrane protein OXA1L, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326550
VERSION     XP_041326550.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470616.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508734.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..308
                     /product="mitochondrial inner membrane protein OXA1L"
     Region          52..242
                     /region_name="5TM_Oxa1-like"
                     /note="Five transmembrane core domain of mitochondrial
                     inner membrane protein Oxa1 and similar proteins; cd20069"
                     /db_xref="CDD:410993"
     CDS             1..308
                     /gene="OXA1L"
                     /coded_by="XM_041470616.1:<1..929"
                     /codon_start=3
                     /db_xref="GeneID:121355312"
ORIGIN      
        1 ppffllpsgr hdgggdpaaa aaaarpegse vagsrvvlrs pgregggerr ragtvgaril
       61 llplvlrgqr eaarlsrhlp elqrlsqrva earrgsdpnq vavayselvs yqrrhnvnpl
      121 rgflvplvqt plfvsfffal qgmaaapvpg llqgglgwfp nlaapdpfyv lpvlvtastw
      181 lvlelgaetg vsapgagpvr qilrllplff lpfivhfpta vftywltsns fsllqtgllr
      241 vpalrsklgv apppappqat ptghapqskg giltqlkkge kwgkngnfwg ilgnflefgn
      301 frnfwgki
//
LOCUS       XP_041326565             206 aa            linear   VRT 06-MAY-2021
DEFINITION  epithelial discoidin domain-containing receptor 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326565
VERSION     XP_041326565.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470631.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508755.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>206
                     /product="epithelial discoidin domain-containing receptor
                     1-like"
     Region          40..167
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cl25480"
                     /db_xref="CDD:330301"
     Site            order(57,88,96)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     CDS             1..206
                     /gene="LOC121355318"
                     /coded_by="XM_041470631.1:<1..>617"
                     /db_xref="GeneID:121355318"
ORIGIN      
        1 slpvlpvppg wgrghggaaa appppaagrg grgdpagdrg dsagpglgrs dgdgawcpag
       61 pvfpaeqefl evdlgrlhlv tlvgtqgrha gghgrefarq yrlrysrdrr rwlrwrdrwg
      121 deviggnedp egvvlkdlsp apvaralrvy prapramsvc lrlelygcpw eagllsytap
      181 rghvmaldpv pivlndstyd gfsagp
//
LOCUS       XP_041326581            2261 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase ABCA1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326581
VERSION     XP_041326581.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470647.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2261
                     /product="phospholipid-transporting ATPase ABCA1"
                     /calculated_mol_wt=253843
     Region          1..2236
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..2261
                     /gene="ABCA1"
                     /coded_by="XM_041470647.1:179..6964"
                     /db_xref="GeneID:121355319"
ORIGIN      
        1 mafwtqlgll lwknftyrrr qtfqllieva wplfiffili svrlsyppye qhechfpnka
       61 mpsagtlpwi qgiicnannp cfryptpges pgivgnfnas ivsrlfsdar rlllysqqdt
      121 sikdvqkvlg klrklgnssg ldlklrdfli dnetfsdflh hnmsmpssav eelldagvnl
      181 qqvivsgyrm rlrdlcnssa sseflmiqnq ttamdseafi ctlskeklha aeqafranln
      241 plkplqrqls fnsslwdlse tvetlresig klvkellsmk swsdmrqevm fltnvnasns
      301 stqiyqavsr ivcghpeggg lkikslnwye dnnykalfgg nsteddvinf ydnsttpycn
      361 elmknlessp lsriiwralk plligkilyt pdtpairkvm sevnrtfqel gvfrdlggmw
      421 eeispkiwtf messqemdli rtllkgkalw dlhlpasnwt vedvarflsn spedfeteng
      481 svytwmdafn etdraiqtis rfmecvnldk lepvptevql vnkslellde rrfwagivft
      541 eiapdstdlp qhvkykirmd idnvertnki kdgywdpgpr adpfedmryv wggfvylqdv
      601 veqaiirvqt gtekktgvyv qqmpypcyvd diflrvmsrs mplfmtlawi ysvaviikgi
      661 vyekearlke tmrimgldng ilwlswfiss lvpllmsagl lvlilkmgnl lpysdpsvvf
      721 iflsifgvvt ilqcflistv fsranlaaac ggivyftlyl pyvlcvawqd hisfslkifa
      781 sllspvafgf gceyfalfee qgvgvqwdnf fespleedgf sittsavmml fdtflygvmt
      841 wyiesvfpgq ygiprpwyfp ftksywfgee pqdrqhshpd qkgssevcke eepvhlslgv
      901 siqnlvkvyr dgkkvavdgl tlnfyegqit sflghngagk tttmsiltgl fpptsgtafi
      961 lgkdirsels tirqnlgvcp qhnvlfdllt veehiwfyar lkglpekkvk eemeqmatdv
     1021 glphklkart sklsggmqrk lsvalafvgg skvvildept agvdpysrrg iwelllkyrq
     1081 grtiilsthh mdeadilgdr iaiishgklc cvgsslflkn qlgtgyyltl vkkdvdssls
     1141 scrnssstvs ylkkddsvsq sssdaglgsd hesdtltidv saisnlitkh vpearlvedi
     1201 gheltyvlpy kaakegafve lfheiddrls dlgissygis ettleeiflk vaddsgvdae
     1261 tsdgtlparr nrrvfgdkqs clrpftedda fdpndsdidp esretdllsg mdgkgsyqmk
     1321 gwkltqqqfm allwkrmlia krswkgffaq ivlpavfvci almfslivpp fgkypslelq
     1381 pwmydeqytf isndapedag thnlldalld kpgfgtrcmq ghsipdtpct vgqkewttas
     1441 vpesvldifv kgnwsmenps pscecsseki kkmlpvcppg agglpppqre qdtadilqnl
     1501 tgrnisdylv ktyaqiigks lknkiwvnef ryggfslgas sslvlppshe vtdavkrvkk
     1561 ilelaqgssg drflnslssf mkgldtknnv kvwfnnkgwh aiasflnvin nailranlqq
     1621 genpsaygit alnhplnltk qqlsevalmt tsvdvlvsic vifamsfvpa sfvvfliqer
     1681 vskakhlqfi sgvkpviywl anfvwdmcny ivpatlvvii ficfqqksyv sssnlpvlal
     1741 llflygwsit plmypasfvf kipstayvvl tsvnlfigin gsvatfvlel ftnnklkdin
     1801 dilksvflif phfclgrgli dmvknqamad alerfgenrf vsplswdlvg rnlfamaveg
     1861 vvfflitvli qyrffikprp vyaklppvnd ededvtrerq riisgggqsd ileikeltki
     1921 yrmkrkpavd ricvgippge cfgllgvnga gksstfkmlt gdtdvtggea flkgnsilsn
     1981 iqevhqnmgy cpqfdavnel ltgrehleff allrgvpeke vckvgewair klglvkygek
     2041 yagnysggnr rklstaiali ggppvvflde pttgmdpkar rflwncalsv ikegrsvvlt
     2101 shsmeeceal ctrmaimvng rfrclgsvqh lknrfgdgyt ivvriaganp dlkpveeffg
     2161 hafpgsvlke khrnmlqyql psspsslaki fsilsqnkkr lhiedysvsq ttldqvfvnf
     2221 akdqsdddht kdlslhknqt lvdiailnsf lqdekvkesc v
//
LOCUS       XP_041326596            1351 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-G-associated kinase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326596
VERSION     XP_041326596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1351
                     /product="cyclin-G-associated kinase isoform X1"
                     /calculated_mol_wt=149195
     Region          38..319
                     /region_name="STKc_GAK"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, cyclin G-Associated Kinase; cd14036"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,130,172,174,
                     176..177,179,190,193,221..224)
                     /site_type="active"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270938"
     Site            order(49,128,130,172,174,176,193,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270938"
     Site            order(189..219,221..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270938"
     Region          406..568
                     /region_name="PTP_GAK"
                     /note="protein tyrosine phosphatase-like domain of
                     cyclin-G-associated kinase; cd14564"
                     /db_xref="CDD:350412"
     Region          576..745
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     Region          <1299..1344
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cd06257"
                     /db_xref="CDD:99751"
     Site            order(1315..1317,1329,1332..1333,1336..1337)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..1351
                     /gene="GAK"
                     /coded_by="XM_041470662.1:158..4213"
                     /db_xref="GeneID:121355320"
ORIGIN      
        1 mslfqsaldf lagpgslgaa srdqndfvgq tvemgdmklr ikrviaeggf afvyeaqdlg
       61 sgkdyalkrl lsneeeknka iiqevcfmkk lsghpnivqf csaasigkee sdtgqgefll
      121 ltelckgqlv eflkkveskg piscdtvlki fyqtcravqh mhkqkppiih rdlkvenlli
      181 snqgtiklcd fgsattiayy pdynwsaqkr avveeeitrn ttpmyrtpem idlysnfpig
      241 ekqdiwalgc ilyllcfrqh pfedgaklri vngkyvipqn dtrysvfhdl irstlkvnpe
      301 erlsitelvn qlqeiaaarn vnpkspitel leqnggygnn aqprtsvtsv sqsskpagql
      361 nnlynagltv aecdqtyggf fdilrggter fftnikdtss kviqsvanya kgdldisyit
      421 sriavmsfpa egvesaiknn iedvrlclds khpghyavyn lsprtyrpsr fhnrvsecgw
      481 parrapnlqn lysicknmhl wlkqdqknvc ivhclvgraa savvvcsflc fcrlfttaea
      541 avymfsmkrc ppgiwpshkr yieymcdmma eepiiphskp ilvrsivmtp vplfskqrng
      601 crpfcevyvg dervtttsqe ydkmkefkie dgkaviplgi tvqgdvlivi yharstlggr
      661 lqakrnvcgf hslvnstfss llsmstpnav hvdafmasmk mfqiqfhtgf vprnattvkf
      721 akydldacdi qekypdlfqv nleveveprd rpsceqppwd nmnikglnpk ilfstreeqq
      781 eilskfgkpe lprqpgstaq yepeasqleq ssesaptdte sphsgstdan nffhsldwke
      841 gktpesgied ssskndcvql sddreesdps deefptfpde gsavivdekd stpegellfe
      901 asfetpsapl qkslpeenvd llgldsdisa eqkqpisein ssssnadlln nlfvssvsqv
      961 sneptgdllg qgadfffssq rpaatqgsss aaavssadpf dpftmsssse nqalsgpdlf
     1021 gdflnptsts tantvpstqs slppssssdf lnlgnltpep pkissstshp dllsgwdswa
     1081 dssttsnvas pqlkpvcegq afttgsqssv ssglsfsqak aqnfdpfadl anlgsglpgs
     1141 stggllgsgf sqktapsqkl gnqwqksskp pstswqsqtk sstaakpnyt vnfsviggre
     1201 ergvrapsfg qkpkvsendf edllsnqgfs aksdkkgpkt iaemrkqems kdmdplklki
     1261 lewiegkern iralistlht vlwegenkwk pvsmadlvtp eqvkkyyrka vlvvhpdkat
     1321 gqpyeqyakm ifmelndaws efenqgsksl f
//
LOCUS       XP_041326605            1350 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-G-associated kinase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326605
VERSION     XP_041326605.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470671.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1350
                     /product="cyclin-G-associated kinase isoform X2"
                     /calculated_mol_wt=149065
     Region          38..319
                     /region_name="STKc_GAK"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, cyclin G-Associated Kinase; cd14036"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,130,172,174,
                     176..177,179,190,193,221..224)
                     /site_type="active"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270938"
     Site            order(49,128,130,172,174,176,193,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270938"
     Site            order(189..219,221..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270938"
     Region          406..568
                     /region_name="PTP_GAK"
                     /note="protein tyrosine phosphatase-like domain of
                     cyclin-G-associated kinase; cd14564"
                     /db_xref="CDD:350412"
     Region          576..745
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     Region          <1298..1343
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cd06257"
                     /db_xref="CDD:99751"
     Site            order(1314..1316,1328,1331..1332,1335..1336)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..1350
                     /gene="GAK"
                     /coded_by="XM_041470671.1:158..4210"
                     /db_xref="GeneID:121355320"
ORIGIN      
        1 mslfqsaldf lagpgslgaa srdqndfvgq tvemgdmklr ikrviaeggf afvyeaqdlg
       61 sgkdyalkrl lsneeeknka iiqevcfmkk lsghpnivqf csaasigkee sdtgqgefll
      121 ltelckgqlv eflkkveskg piscdtvlki fyqtcravqh mhkqkppiih rdlkvenlli
      181 snqgtiklcd fgsattiayy pdynwsaqkr avveeeitrn ttpmyrtpem idlysnfpig
      241 ekqdiwalgc ilyllcfrqh pfedgaklri vngkyvipqn dtrysvfhdl irstlkvnpe
      301 erlsitelvn qlqeiaaarn vnpkspitel leqnggygnn aqprtsvtsv sqsskpagql
      361 nnlynagltv aecdqtyggf fdilrggter fftnikdtss kviqsvanya kgdldisyit
      421 sriavmsfpa egvesaiknn iedvrlclds khpghyavyn lsprtyrpsr fhnrvsecgw
      481 parrapnlqn lysicknmhl wlkqdqknvc ivhclvgraa savvvcsflc fcrlfttaea
      541 avymfsmkrc ppgiwpshkr yieymcdmma eepiiphskp ilvrsivmtp vplfskqrng
      601 crpfcevyvg dervtttsqe ydkmkefkie dgkaviplgi tvqgdvlivi yharstlggr
      661 lqakrnvcgf hslvnstfss llsmstpnav hvdafmasmk mfqiqfhtgf vprnattvkf
      721 akydldacdi qekypdlfqv nleveveprd rpsceqppwd nmnikglnpk ilfstreeqq
      781 eilskfgkpe lprqpgstaq yepeasqleq ssesaptdte sphsgstdan nffhsldwkg
      841 ktpesgieds sskndcvqls ddreesdpsd eefptfpdeg savivdekds tpegellfea
      901 sfetpsaplq kslpeenvdl lgldsdisae qkqpiseins sssnadllnn lfvssvsqvs
      961 neptgdllgq gadfffssqr paatqgsssa aavssadpfd pftmssssen qalsgpdlfg
     1021 dflnptstst antvpstqss lppssssdfl nlgnltpepp kissstshpd llsgwdswad
     1081 ssttsnvasp qlkpvcegqa fttgsqssvs sglsfsqaka qnfdpfadla nlgsglpgss
     1141 tggllgsgfs qktapsqklg nqwqksskpp stswqsqtks staakpnytv nfsviggree
     1201 rgvrapsfgq kpkvsendfe dllsnqgfsa ksdkkgpkti aemrkqemsk dmdplklkil
     1261 ewiegkerni ralistlhtv lwegenkwkp vsmadlvtpe qvkkyyrkav lvvhpdkatg
     1321 qpyeqyakmi fmelndawse fenqgskslf
//
LOCUS       XP_041326614            1320 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-G-associated kinase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326614
VERSION     XP_041326614.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470680.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1320
                     /product="cyclin-G-associated kinase isoform X3"
                     /calculated_mol_wt=145874
     Region          38..319
                     /region_name="STKc_GAK"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, cyclin G-Associated Kinase; cd14036"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,130,172,174,
                     176..177,179,190,193,221..224)
                     /site_type="active"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270938"
     Site            order(49,128,130,172,174,176,193,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270938"
     Site            order(189..219,221..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270938"
     Region          406..568
                     /region_name="PTP_GAK"
                     /note="protein tyrosine phosphatase-like domain of
                     cyclin-G-associated kinase; cd14564"
                     /db_xref="CDD:350412"
     Region          576..714
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     Region          <1268..1313
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cd06257"
                     /db_xref="CDD:99751"
     Site            order(1284..1286,1298,1301..1302,1305..1306)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..1320
                     /gene="GAK"
                     /coded_by="XM_041470680.1:158..4120"
                     /db_xref="GeneID:121355320"
ORIGIN      
        1 mslfqsaldf lagpgslgaa srdqndfvgq tvemgdmklr ikrviaeggf afvyeaqdlg
       61 sgkdyalkrl lsneeeknka iiqevcfmkk lsghpnivqf csaasigkee sdtgqgefll
      121 ltelckgqlv eflkkveskg piscdtvlki fyqtcravqh mhkqkppiih rdlkvenlli
      181 snqgtiklcd fgsattiayy pdynwsaqkr avveeeitrn ttpmyrtpem idlysnfpig
      241 ekqdiwalgc ilyllcfrqh pfedgaklri vngkyvipqn dtrysvfhdl irstlkvnpe
      301 erlsitelvn qlqeiaaarn vnpkspitel leqnggygnn aqprtsvtsv sqsskpagql
      361 nnlynagltv aecdqtyggf fdilrggter fftnikdtss kviqsvanya kgdldisyit
      421 sriavmsfpa egvesaiknn iedvrlclds khpghyavyn lsprtyrpsr fhnrvsecgw
      481 parrapnlqn lysicknmhl wlkqdqknvc ivhclvgraa savvvcsflc fcrlfttaea
      541 avymfsmkrc ppgiwpshkr yieymcdmma eepiiphskp ilvrsivmtp vplfskqrng
      601 crpfcevyvg dervtttsqe ydkmkefkie dgkaviplgi tvqgdvlivi yharstlggr
      661 lqakmasmkm fqiqfhtgfv prnattvkfa kydldacdiq ekypdlfqvn leveveprdr
      721 psceqppwdn mnikglnpki lfstreeqqe ilskfgkpel prqpgstaqy epeasqleqs
      781 sesaptdtes phsgstdann ffhsldwkeg ktpesgieds sskndcvqls ddreesdpsd
      841 eefptfpdeg savivdekds tpegellfea sfetpsaplq kslpeenvdl lgldsdisae
      901 qkqpiseins sssnadllnn lfvssvsqvs neptgdllgq gadfffssqr paatqgsssa
      961 aavssadpfd pftmssssen qalsgpdlfg dflnptstst antvpstqss lppssssdfl
     1021 nlgnltpepp kissstshpd llsgwdswad ssttsnvasp qlkpvcegqa fttgsqssvs
     1081 sglsfsqaka qnfdpfadla nlgsglpgss tggllgsgfs qktapsqklg nqwqksskpp
     1141 stswqsqtks staakpnytv nfsviggree rgvrapsfgq kpkvsendfe dllsnqgfsa
     1201 ksdkkgpkti aemrkqemsk dmdplklkil ewiegkerni ralistlhtv lwegenkwkp
     1261 vsmadlvtpe qvkkyyrkav lvvhpdkatg qpyeqyakmi fmelndawse fenqgskslf
//
LOCUS       XP_041326621            1319 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-G-associated kinase isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326621
VERSION     XP_041326621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1319
                     /product="cyclin-G-associated kinase isoform X4"
                     /calculated_mol_wt=145745
     Region          38..319
                     /region_name="STKc_GAK"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, cyclin G-Associated Kinase; cd14036"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,130,172,174,
                     176..177,179,190,193,221..224)
                     /site_type="active"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270938"
     Site            order(49,128,130,172,174,176,193,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270938"
     Site            order(189..219,221..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270938"
     Region          406..568
                     /region_name="PTP_GAK"
                     /note="protein tyrosine phosphatase-like domain of
                     cyclin-G-associated kinase; cd14564"
                     /db_xref="CDD:350412"
     Region          576..714
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     Region          <1267..1312
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cd06257"
                     /db_xref="CDD:99751"
     Site            order(1283..1285,1297,1300..1301,1304..1305)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..1319
                     /gene="GAK"
                     /coded_by="XM_041470687.1:158..4117"
                     /db_xref="GeneID:121355320"
ORIGIN      
        1 mslfqsaldf lagpgslgaa srdqndfvgq tvemgdmklr ikrviaeggf afvyeaqdlg
       61 sgkdyalkrl lsneeeknka iiqevcfmkk lsghpnivqf csaasigkee sdtgqgefll
      121 ltelckgqlv eflkkveskg piscdtvlki fyqtcravqh mhkqkppiih rdlkvenlli
      181 snqgtiklcd fgsattiayy pdynwsaqkr avveeeitrn ttpmyrtpem idlysnfpig
      241 ekqdiwalgc ilyllcfrqh pfedgaklri vngkyvipqn dtrysvfhdl irstlkvnpe
      301 erlsitelvn qlqeiaaarn vnpkspitel leqnggygnn aqprtsvtsv sqsskpagql
      361 nnlynagltv aecdqtyggf fdilrggter fftnikdtss kviqsvanya kgdldisyit
      421 sriavmsfpa egvesaiknn iedvrlclds khpghyavyn lsprtyrpsr fhnrvsecgw
      481 parrapnlqn lysicknmhl wlkqdqknvc ivhclvgraa savvvcsflc fcrlfttaea
      541 avymfsmkrc ppgiwpshkr yieymcdmma eepiiphskp ilvrsivmtp vplfskqrng
      601 crpfcevyvg dervtttsqe ydkmkefkie dgkaviplgi tvqgdvlivi yharstlggr
      661 lqakmasmkm fqiqfhtgfv prnattvkfa kydldacdiq ekypdlfqvn leveveprdr
      721 psceqppwdn mnikglnpki lfstreeqqe ilskfgkpel prqpgstaqy epeasqleqs
      781 sesaptdtes phsgstdann ffhsldwkgk tpesgiedss skndcvqlsd dreesdpsde
      841 efptfpdegs avivdekdst pegellfeas fetpsaplqk slpeenvdll gldsdisaeq
      901 kqpiseinss ssnadllnnl fvssvsqvsn eptgdllgqg adfffssqrp aatqgsssaa
      961 avssadpfdp ftmssssenq alsgpdlfgd flnptststa ntvpstqssl ppssssdfln
     1021 lgnltpeppk issstshpdl lsgwdswads sttsnvaspq lkpvcegqaf ttgsqssvss
     1081 glsfsqakaq nfdpfadlan lgsglpgsst ggllgsgfsq ktapsqklgn qwqksskpps
     1141 tswqsqtkss taakpnytvn fsviggreer gvrapsfgqk pkvsendfed llsnqgfsak
     1201 sdkkgpktia emrkqemskd mdplklkile wiegkernir alistlhtvl wegenkwkpv
     1261 smadlvtpeq vkkyyrkavl vvhpdkatgq pyeqyakmif melndawsef enqgskslf
//
LOCUS       XP_041326629            1286 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-G-associated kinase isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326629
VERSION     XP_041326629.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470695.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1286
                     /product="cyclin-G-associated kinase isoform X5"
                     /calculated_mol_wt=141610
     Region          38..319
                     /region_name="STKc_GAK"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, cyclin G-Associated Kinase; cd14036"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,130,172,174,
                     176..177,179,190,193,221..224)
                     /site_type="active"
                     /db_xref="CDD:270938"
     Site            order(45..49,53,66,68,98,122..125,128,172,174,176..177,
                     179,190)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270938"
     Site            order(49,128,130,172,174,176,193,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270938"
     Site            order(189..219,221..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270938"
     Region          406..560
                     /region_name="PTP_GAK"
                     /note="protein tyrosine phosphatase-like domain of
                     cyclin-G-associated kinase; cd14564"
                     /db_xref="CDD:350412"
     Region          <558..680
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     Region          <1234..1279
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cd06257"
                     /db_xref="CDD:99751"
     Site            order(1250..1252,1264,1267..1268,1271..1272)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..1286
                     /gene="GAK"
                     /coded_by="XM_041470695.1:158..4018"
                     /db_xref="GeneID:121355320"
ORIGIN      
        1 mslfqsaldf lagpgslgaa srdqndfvgq tvemgdmklr ikrviaeggf afvyeaqdlg
       61 sgkdyalkrl lsneeeknka iiqevcfmkk lsghpnivqf csaasigkee sdtgqgefll
      121 ltelckgqlv eflkkveskg piscdtvlki fyqtcravqh mhkqkppiih rdlkvenlli
      181 snqgtiklcd fgsattiayy pdynwsaqkr avveeeitrn ttpmyrtpem idlysnfpig
      241 ekqdiwalgc ilyllcfrqh pfedgaklri vngkyvipqn dtrysvfhdl irstlkvnpe
      301 erlsitelvn qlqeiaaarn vnpkspitel leqnggygnn aqprtsvtsv sqsskpagql
      361 nnlynagltv aecdqtyggf fdilrggter fftnikdtss kviqsvanya kgdldisyit
      421 sriavmsfpa egvesaiknn iedvrlclds khpghyavyn lsprtyrpsr fhnrvsecgw
      481 parrapnlqn lysicknmhl wlkqdqknvc ivhclvgraa savvvcsflc fcrlfttaea
      541 avymfsmkrc ppgiwpshkr efkiedgkav iplgitvqgd vliviyhars tlggrlqakr
      601 nvcgfhslvn stfssllsms tpnavhvdaf masmkmfqiq fhtgfvprna ttvkfakydl
      661 dacdiqekyp dlfqvnleve veprdrpsce qppwdnmnik glnpkilfst reeqqeilsk
      721 fgkpelprqp gstaqyepea sqleqssesa ptdtesphsg stdannffhs ldwkegktpe
      781 sgiedssskn dcvqlsddre esdpsdeefp tfpdegsavi vdekdstpeg ellfeasfet
      841 psaplqkslp eenvdllgld sdisaeqkqp iseinssssn adllnnlfvs svsqvsnept
      901 gdllgqgadf ffssqrpaat qgsssaaavs sadpfdpftm ssssenqals gpdlfgdfln
      961 ptststantv pstqsslpps sssdflnlgn ltpeppkiss stshpdllsg wdswadsstt
     1021 snvaspqlkp vcegqafttg sqssvssgls fsqakaqnfd pfadlanlgs glpgsstggl
     1081 lgsgfsqkta psqklgnqwq ksskppstsw qsqtksstaa kpnytvnfsv iggreergvr
     1141 apsfgqkpkv sendfedlls nqgfsaksdk kgpktiaemr kqemskdmdp lklkilewie
     1201 gkernirali stlhtvlweg enkwkpvsma dlvtpeqvkk yyrkavlvvh pdkatgqpye
     1261 qyakmifmel ndawsefenq gskslf
//
LOCUS       XP_041326641             484 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoprotein lipase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326641
VERSION     XP_041326641.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470707.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..484
                     /product="lipoprotein lipase isoform X1"
                     /calculated_mol_wt=54659
     Region          27..467
                     /region_name="lipo_lipase"
                     /note="lipoprotein lipase; TIGR03230"
                     /db_xref="CDD:132274"
     CDS             1..484
                     /gene="LPL"
                     /coded_by="XM_041470707.1:185..1639"
                     /db_xref="GeneID:121355346"
ORIGIN      
        1 mwrkaflaav clclrcvpal gaegknnfeg ieskfslrtp aepdedvcyl vpgqvnslaq
       61 cnfnhtsktf vvihgwtvtg myeswvpklv dalykrepds nvivvdwlvr aqqhypvsaa
      121 ytrlvgkdva tfidwmeeqf nyplnnlhll gyslgahaag iagnltkkkv nritgldpag
      181 ptfeyadelt rlspddaefv dvlhtytrgs pdrsigiqkp vghidiypng ggfqpgcnlg
      241 ealrliaekg lgdvdqlvkc shersihlfi dsllneekps mayrcntkea fekglclscr
      301 knrcnnlgyk vnrvrtkrnt kmylktraqm pykvfhyqvk ihffgktnmt ktnqpflisl
      361 ygtldkseni gftlpevssn ktfsfliyte vdigdlfmvk lqwekdtffs wsdwwtpftf
      421 diqrirmksg etqkkvvfcs rdgtsrlgkg eeaavfvkcs eqpinrkrgg tkraskensa
      481 hesa
//
LOCUS       XP_041326656             483 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoprotein lipase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326656
VERSION     XP_041326656.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470722.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..483
                     /product="lipoprotein lipase isoform X2"
                     /calculated_mol_wt=54588
     Region          26..466
                     /region_name="lipo_lipase"
                     /note="lipoprotein lipase; TIGR03230"
                     /db_xref="CDD:132274"
     CDS             1..483
                     /gene="LPL"
                     /coded_by="XM_041470722.1:185..1636"
                     /db_xref="GeneID:121355346"
ORIGIN      
        1 mwrkaflaav clclrcvpal gegknnfegi eskfslrtpa epdedvcylv pgqvnslaqc
       61 nfnhtsktfv vihgwtvtgm yeswvpklvd alykrepdsn vivvdwlvra qqhypvsaay
      121 trlvgkdvat fidwmeeqfn yplnnlhllg yslgahaagi agnltkkkvn ritgldpagp
      181 tfeyadeltr lspddaefvd vlhtytrgsp drsigiqkpv ghidiypngg gfqpgcnlge
      241 alrliaekgl gdvdqlvkcs hersihlfid sllneekpsm ayrcntkeaf ekglclscrk
      301 nrcnnlgykv nrvrtkrntk mylktraqmp ykvfhyqvki hffgktnmtk tnqpflisly
      361 gtldksenig ftlpevssnk tfsfliytev digdlfmvkl qwekdtffsw sdwwtpftfd
      421 iqrirmksge tqkkvvfcsr dgtsrlgkge eaavfvkcse qpinrkrggt kraskensah
      481 esa
//
LOCUS       XP_041326669             493 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal acetylcholine receptor subunit alpha-6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326669
VERSION     XP_041326669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="neuronal acetylcholine receptor subunit alpha-6"
                     /calculated_mol_wt=57686
     Region          16..486
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          34..240
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(69,71,77..78,85,107,109,118..119,121,123..124,
                     135..137,139,149,151,153,157,179,239)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349787"
     CDS             1..493
                     /gene="CHRNA6"
                     /coded_by="XM_041470735.1:172..1653"
                     /db_xref="GeneID:121355358"
ORIGIN      
        1 mhpetrlcwc cpafcvwafv ftslikdtta ceseerlfhk lfsqynqfir pvenvsdpvt
       61 vyfelaitql tnvdevnqim etnlwlrhiw ndyklrwdpr qydgiefvrv padkiwkpdi
      121 vlynnavgdf qvesktkall rydgmitwtp paifksscpm ditffpfdhq ncslkfgswt
      181 ydkakidlli igskvdmndf wenseweivd asgykhdiky ncceeiytdi tysfyirrlp
      241 mfytinliip clfisfltvl vfylpsdcge kvnlcisvll sltvfllvit etipstslvi
      301 plvgeyllft mifvtlsivi tvfvlnihyr tpmthtmpkw vktvflsllp rvllmqrple
      361 qqkkntsrkn kkvsdsklgk skhskhkdtk lhkeqrcshc dqatelpttk rqlshqslrw
      421 maehmeyspe vkdvisnvqf iaenmrsqne tkeveddwky iamvidrvfl wvfiilcvfg
      481 tvglfiqpli aet
//
LOCUS       XP_041326681             455 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal acetylcholine receptor subunit beta-3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326681
VERSION     XP_041326681.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470747.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="neuronal acetylcholine receptor subunit beta-3"
                     /calculated_mol_wt=52159
     Region          1..446
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          51..229
                     /region_name="LGIC_ECD_nAChR_B3"
                     /note="extracellular domain of nicotinic acetylcholine
                     receptor subunit beta 3 (CHRNB3); cd19026"
                     /db_xref="CDD:349827"
     Site            order(61,63,69..70,77,99,101,110..111,113,115..116,120,
                     122..123,127..129,131,141,143,145,149,171,229)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349827"
     Region          150..164
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349827"
     CDS             1..455
                     /gene="CHRNB3"
                     /coded_by="XM_041470747.1:1..1368"
                     /db_xref="GeneID:121355365"
ORIGIN      
        1 mlclvlialc lshsdvnafs svaenedall khlfegyqkw vrpvensndt ikvlfglkis
       61 qlvdvdeknq lmttnvwlkq ewidhklswn pdeyggitai rvpseslwlp divlfenadg
      121 rfegslmtka ivkyngvvsw tppasykssc tmdvtffpfd rqncsmkfgs wtydgnmvdl
      181 ilvdenvdrk dffdngewei lnakgmkgnr kdglysypfv tysfvlrrlp lfytlfliip
      241 clglsfltvl vfylpsdege klslstsvlv sltvfllvie eiipssskvi pligeyllfi
      301 mifvtlsiiv tvfvinvhhr ssatyhpmap wvkrlflqkl prllcmkahv drysfsdtee
      361 kgatskskfl gkqrykqakd gekiiiafle kaadsiryis rhvkkehfir qvvqdwkfva
      421 qvldriflwl flvvsvtgsv liftpalrmw lnntl
//
LOCUS       XP_041326693             753 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: sulfate anion transporter 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326693
VERSION     XP_041326693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470759.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="LOW QUALITY PROTEIN: sulfate anion transporter
                     1"
                     /calculated_mol_wt=83537
     Region          98..738
                     /region_name="sulP"
                     /note="high affinity sulphate transporter 1; TIGR00815"
                     /db_xref="CDD:273284"
     CDS             1..753
                     /gene="SLC26A1"
                     /coded_by="XM_041470759.1:1..2262"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121355375"
ORIGIN      
        1 mqiexclaed fhsfqcakte llhscqkaiq ehindvntgk merpleatrm enntsscflm
       61 krkthvkinr keimlaklrk scsctpqklk nflmdffpvl rwlpkyrcke yiwgdimsgl
      121 vigiilvpqa iaysllaglk piyslytsff aniiyflmgt srhvsvgifs lislmvgqvv
      181 drelllagfd lnddappasg dgslqndnls nitafnltiv ginaecgkec yaigiatalt
      241 fmagvyqvlm gifrlgfvsm ylsesvldgf atgasltilt aqvkyligik iprsqghgml
      301 vitwinifrn isqanlcdvi tsaicivvlv takelgdryk hklkfplpte lvvivvatlv
      361 shygklnevy assvsgaipt gfippkvpef nlmlrvalda lplaivsfvf tvslsemfak
      421 kyaytiranq emfavgfcni ipsffhsfat saalaktlvk tstgcqtqis gvisamvvll
      481 vllflaplfy slqkcvlaci iivslrgalr kfrdvparyc mnkvdtlvwv vtmaasalvs
      541 teigllvgiv fsmlciivrt qrprtallgq iqdtsfyedd leyenlstvp kvkifrfeap
      601 lyyanrnyfl kslyrltnld pnleaarrkk yekkekqhlk kgnhrtangl gigettlqlv
      661 pkqidfqalv idcssisfld ttgvntlkei lkdyknlnis vllaccnpsv idslkrggyf
      721 gkdfgcmqem lfysihnavl fakdqklpad csv
//
LOCUS       XP_041326703             631 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-L-iduronidase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326703
VERSION     XP_041326703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="alpha-L-iduronidase isoform X1"
                     /calculated_mol_wt=71476
     Region          19..514
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     CDS             1..631
                     /gene="IDUA"
                     /coded_by="XM_041470769.1:283..2178"
                     /db_xref="GeneID:121355383"
ORIGIN      
        1 mgpllwlllv plgagsaaye vyvdarraer plqhfwrstg fcpplphsra dlfdlskdqe
       61 lnlayissvp hggieqvrih wllelvalrv vngklnydft aldnlmdwlw enklipgfel
      121 mgnpsgyfld fedkervvqw rnlitvlarr yidryglehv akwnfetwne pdhhdfdnvs
      181 mtvkgflnyy dacseglkaa spflkfggpg dsfhplpksp mcwsllchcy ngtnfftget
      241 gvrldyisvh kkgdgnslyi lqqeveavqq iqklfpgfss vaiyndeadp mvgwsipqlw
      301 radvtyaamv vkiiiqhqnl liskanntin ysllsndnaf lsyyphyftq rtltarfqmn
      361 ntkpphvqmv rkpvltamgl lallgekqif aevkisgdes aqnstvgvla svhtpsetqp
      421 sdswqatvlm yssednrtss nissvivnat hfpkhremvy vtyymdnnqt npylkwknlg
      481 spdfpspeqf qqirdaedpl vtgpfpfpea giltlkqdfp vpsvflihic arprsapdqv
      541 tgvrlipltk gqvivlwddd cvkskciktf evefssdgkv yqrinakdti ftlwvyspgr
      601 svsgfyrvra idywgkagls slpvgyieaf k
//
LOCUS       XP_041326714             625 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-L-iduronidase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326714
VERSION     XP_041326714.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470780.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..625
                     /product="alpha-L-iduronidase isoform X2"
                     /calculated_mol_wt=70847
     Region          19..508
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     CDS             1..625
                     /gene="IDUA"
                     /coded_by="XM_041470780.1:283..2160"
                     /db_xref="GeneID:121355383"
ORIGIN      
        1 mgpllwlllv plgagsaaye vyvdarraer plqhfwrstg fcradlfdls kdqelnlayi
       61 ssvphggieq vrihwllelv alrvvngkln ydftaldnlm dwlwenklip gfelmgnpsg
      121 yfldfedker vvqwrnlitv larryidryg lehvakwnfe twnepdhhdf dnvsmtvkgf
      181 lnyydacseg lkaaspflkf ggpgdsfhpl pkspmcwsll chcyngtnff tgetgvrldy
      241 isvhkkgdgn slyilqqeve avqqiqklfp gfssvaiynd eadpmvgwsi pqlwradvty
      301 aamvvkiiiq hqnlliskan ntinysllsn dnaflsyyph yftqrtltar fqmnntkpph
      361 vqmvrkpvlt amgllallge kqifaevkis gdesaqnstv gvlasvhtps etqpsdswqa
      421 tvlmyssedn rtssnissvi vnathfpkhr emvyvtyymd nnqtnpylkw knlgspdfps
      481 peqfqqirda edplvtgpfp fpeagiltlk qdfpvpsvfl ihicarprsa pdqvtgvrli
      541 pltkgqvivl wdddcvkskc iktfevefss dgkvyqrina kdtiftlwvy spgrsvsgfy
      601 rvraidywgk aglsslpvgy ieafk
//
LOCUS       XP_041326725             685 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-neuregulin-1, membrane-bound isoform isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326725
VERSION     XP_041326725.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470791.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..685
                     /product="pro-neuregulin-1, membrane-bound isoform isoform
                     X1"
                     /calculated_mol_wt=74982
     Region          232..262
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          314..667
                     /region_name="Neuregulin"
                     /note="Neuregulin intracellular region; pfam02158"
                     /db_xref="CDD:426627"
     CDS             1..685
                     /gene="NRG1"
                     /coded_by="XM_041470791.1:614..2671"
                     /db_xref="GeneID:121355394"
ORIGIN      
        1 msevaadtfp spsaqlspda slnglpdeen mpgtqredrr vqgiaglaat ccvcleaerl
       61 kgclnsekic iapilaclls lclciaglkw vfvdkifeyd spthldpgri gqdpksavdp
      121 talsawvpse vyaspflvps pkskaevtvh sdsslvpskp flqpslynri ldvgllssaa
      181 pslsppalep ttasqaqate tnlqtapkls tststtgtsh ltkcdikqka fcvnggecym
      241 vkdlpnppry lcrcpneftg drcqnyvmas fykhlgiefm eaeelyqkrv ltitgicial
      301 lvvgimcvva ycktkkqrkk lhdrlrqslr sernnvmnma ngphhpnppp dnvqlvnqyv
      361 sknvissehv ieretetsfs tshytstthh svtvtqtpsh swsnghtesi lseshsvlvs
      421 ssmensrhas pagprgrlng iggpregssf lrharetpds yrdsphsery vsamttparm
      481 spvefhtpts pksrpstmsp passltvsip svavspfiee erplllvtpl qlhekydhhl
      541 qqfnsfhhna thesnslpps plrivedeey ettqeyepaq eppkkltnsr rvkrtkpngh
      601 issrvevdsd tssesssset etederiged tpflsipnpg atglepataf rlaetrtnpa
      661 nrfstpeelq arlssvianq dpiav
//
LOCUS       XP_041326734             688 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-neuregulin-1, membrane-bound isoform isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326734
VERSION     XP_041326734.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470800.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="pro-neuregulin-1, membrane-bound isoform isoform
                     X2"
                     /calculated_mol_wt=75189
     Region          <232..264
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          317..670
                     /region_name="Neuregulin"
                     /note="Neuregulin intracellular region; pfam02158"
                     /db_xref="CDD:426627"
     CDS             1..688
                     /gene="NRG1"
                     /coded_by="XM_041470800.1:1..2067"
                     /db_xref="GeneID:121355394"
ORIGIN      
        1 msevaadtfp spsaqlspda slnglpdeen mpgtqredrr vqgiaglaat ccvcleaerl
       61 kgclnsekic iapilaclls lclciaglkw vfvdkifeyd spthldpgri gqdpksavdp
      121 talsawvpse vyaspflvps pkskaevtvh sdsslvpskp flqpslynri ldvgllssaa
      181 pslsppalep ttasqaqate tnlqtapkls tststtgtsh ltkcdikqka fcvnggecym
      241 vkdlpnppry lcrcqpgftg arctetlpmk iqnqekhlgi efmeaeelyq krvltitgic
      301 iallvvgimc vvaycktkkq rkklhdrlrq slrsernnvm nmangphhpn pppdnvqlvn
      361 qyvsknviss ehvieretet sfstshytst thhsvtvtqt pshswsnght esilseshsv
      421 lvsssmensr haspagprgr lngiggpreg ssflrharet pdsyrdsphs eryvsamttp
      481 armspvefht ptspksrpst msppassltv sipsvavspf ieeerplllv tplqlhekyd
      541 hhlqqfnsfh hnathesnsl ppsplrived eeyettqeye paqeppkklt nsrrvkrtkp
      601 nghissrvev dsdtssesss setetederi gedtpflsip npgatglepa tafrlaetrt
      661 npanrfstpe elqarlssvi anqdpiav
//
LOCUS       XP_041326744             677 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-neuregulin-1, membrane-bound isoform isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326744
VERSION     XP_041326744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..677
                     /product="pro-neuregulin-1, membrane-bound isoform isoform
                     X3"
                     /calculated_mol_wt=74024
     Region          193..313
                     /region_name="PHA03099"
                     /note="epidermal growth factor-like protein (EGF-like
                     protein); Provisional"
                     /db_xref="CDD:165381"
     Region          232..262
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          306..659
                     /region_name="Neuregulin"
                     /note="Neuregulin intracellular region; pfam02158"
                     /db_xref="CDD:426627"
     CDS             1..677
                     /gene="NRG1"
                     /coded_by="XM_041470810.1:614..2647"
                     /db_xref="GeneID:121355394"
ORIGIN      
        1 msevaadtfp spsaqlspda slnglpdeen mpgtqredrr vqgiaglaat ccvcleaerl
       61 kgclnsekic iapilaclls lclciaglkw vfvdkifeyd spthldpgri gqdpksavdp
      121 talsawvpse vyaspflvps pkskaevtvh sdsslvpskp flqpslynri ldvgllssaa
      181 pslsppalep ttasqaqate tnlqtapkls tststtgtsh ltkcdikqka fcvnggecym
      241 vkdlpnppry lcrcpneftg drcqnyvmas fykaeelyqk rvltitgici allvvgimcv
      301 vaycktkkqr kklhdrlrqs lrsernnvmn mangphhpnp ppdnvqlvnq yvsknvisse
      361 hvieretets fstshytstt hhsvtvtqtp shswsnghte silseshsvl vsssmensrh
      421 aspagprgrl ngiggpregs sflrharetp dsyrdsphse ryvsamttpa rmspvefhtp
      481 tspksrpstm sppassltvs ipsvavspfi eeerplllvt plqlhekydh hlqqfnsfhh
      541 nathesnslp psplrivede eyettqeyep aqeppkkltn srrvkrtkpn ghissrvevd
      601 sdtssessss etetederig edtpflsipn pgatglepat afrlaetrtn panrfstpee
      661 lqarlssvia nqdpiav
//
LOCUS       XP_041326752             676 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-neuregulin-1, membrane-bound isoform isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326752
VERSION     XP_041326752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470818.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..676
                     /product="pro-neuregulin-1, membrane-bound isoform isoform
                     X4"
                     /calculated_mol_wt=73903
     Region          78..170
                     /region_name="Ig_Pro_neuregulin-1"
                     /note="Immunoglobulin (Ig)-like domain found in neuregulin
                     (NRG)-1; cd05895"
                     /db_xref="CDD:409476"
     Region          78..83
                     /region_name="putative Ig strand A"
                     /note="putative Ig strand A [structural motif]"
                     /db_xref="CDD:409476"
     Region          91..99
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409476"
     Region          106..111
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409476"
     Region          125..130
                     /region_name="putative Ig strand D"
                     /note="putative Ig strand D [structural motif]"
                     /db_xref="CDD:409476"
     Region          136..140
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409476"
     Region          150..155
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409476"
     Region          162..170
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409476"
     Region          <223..312
                     /region_name="PHA03099"
                     /note="epidermal growth factor-like protein (EGF-like
                     protein); Provisional"
                     /db_xref="CDD:165381"
     Region          231..261
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          305..658
                     /region_name="Neuregulin"
                     /note="Neuregulin intracellular region; pfam02158"
                     /db_xref="CDD:426627"
     CDS             1..676
                     /gene="NRG1"
                     /coded_by="XM_041470818.1:67..2097"
                     /db_xref="GeneID:121355394"
ORIGIN      
        1 mlepralrep taaavaaegv tagmaaaags agpagagmae kkkagngrkg rkgkgpgkkp
       61 sppeegeapg sttvvplklk emknqeaavg qklvlrcett seypavrfkw lkngkeitkk
      121 nrpenikipk kqkkyselhi yratladage yvcrvssklg ndstkasvii tdtnestski
      181 pvstevtkts sqpmlriqas tegtntssst ststtgtshl tkcdikqkaf cvnggecymv
      241 kdlpnppryl crcpneftgd rcqnyvmasf ykaeelyqkr vltitgicia llvvgimcvv
      301 aycktkkqrk klhdrlrqsl rsernnvmnm angphhpnpp pdnvqlvnqy vsknvisseh
      361 vieretetsf stshytstth hsvtvtqtps hswsnghtes ilseshsvlv sssmensrha
      421 spagprgrln giggpregss flrharetpd syrdsphser yvsamttpar mspvefhtpt
      481 spksrpstms ppassltvsi psvavspfie eerplllvtp lqlhekydhh lqqfnsfhhn
      541 athesnslpp splrivedee yettqeyepa qeppkkltns rrvkrtkpng hissrvevds
      601 dtssesssse tetederige dtpflsipnp gatglepata frlaetrtnp anrfstpeel
      661 qarlssvian qdpiav
//
LOCUS       XP_041326764             748 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Hook homolog 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326764
VERSION     XP_041326764.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470830.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..748
                     /product="protein Hook homolog 3 isoform X1"
                     /calculated_mol_wt=86088
     Region          8..160
                     /region_name="HkD_SF"
                     /note="Hook domain-containing proteins superfamily;
                     cl41774"
                     /db_xref="CDD:425405"
     Site            order(127,144,147..148,150..151,154..155,158)
                     /site_type="other"
                     /note="LIC-binding interface [polypeptide binding]"
                     /db_xref="CDD:411797"
     Region          184..735
                     /region_name="HOOK"
                     /note="HOOK protein coiled-coil region; pfam05622"
                     /db_xref="CDD:461694"
     CDS             1..748
                     /gene="HOOK3"
                     /coded_by="XM_041470830.1:68..2314"
                     /db_xref="GeneID:121355415"
ORIGIN      
        1 mfnveslera elgeslltwi qtfnveapcq tvedltsgvv maqvlqkidp ayfdenwlnr
       61 iktevgdnwr lkvsnlkkil kgildynhei lgqqindftl pdvnligeha daaelgrmlq
      121 lilgcavnce qkqeyiqtim mmeesvqhvv mtaiqelmsk espvsvgnda yvdldrqlkk
      181 tteelneala tkeeiaqrch eldmqvaalq eekssllaen qilmerlnqs dsiedpnspa
      241 grrhlqlqtq leqlqeetfr leaakddyri rceelekeia elrqqteelt tlaeeaqslk
      301 deidvlrhss dkvaklesqv esykkkledl gdlrrqvkll eekntmymqn tvsleeelrk
      361 anaarsqlet ykrqavelqn rlseeskkad kldyeckrlk ekvdslqkek drlrterdsl
      421 ketieelrcv qaqegqlstt glmplgrqep sdslaaeiit peikeklirl qhenkmlkln
      481 qegsdnekia llqsllddan lrkneleten rlvnqrllev qsqveelqks lqdqgskaed
      541 flllaavlly tnvisvswhg lllkaisvll kkkleehlek lheannelqk kraiiedlep
      601 rcnnsslkie elqealrkke eemkqmeery kkylekaksv irtldpkqnq gaapeiqalk
      661 nqlqerdrml hslekeyekt ksqremeekf ivsawynmgm tlhkkaaedr lastgsgqsf
      721 larqrqatst rrsypghvqp atasdvva
//
LOCUS       XP_041326771             724 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Hook homolog 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326771
VERSION     XP_041326771.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470837.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..724
                     /product="protein Hook homolog 3 isoform X2"
                     /calculated_mol_wt=83422
     Region          8..160
                     /region_name="HkD_SF"
                     /note="Hook domain-containing proteins superfamily;
                     cl41774"
                     /db_xref="CDD:425405"
     Site            order(127,144,147..148,150..151,154..155,158)
                     /site_type="other"
                     /note="LIC-binding interface [polypeptide binding]"
                     /db_xref="CDD:411797"
     Region          184..711
                     /region_name="HOOK"
                     /note="HOOK protein coiled-coil region; pfam05622"
                     /db_xref="CDD:461694"
     CDS             1..724
                     /gene="HOOK3"
                     /coded_by="XM_041470837.1:68..2242"
                     /db_xref="GeneID:121355415"
ORIGIN      
        1 mfnveslera elgeslltwi qtfnveapcq tvedltsgvv maqvlqkidp ayfdenwlnr
       61 iktevgdnwr lkvsnlkkil kgildynhei lgqqindftl pdvnligeha daaelgrmlq
      121 lilgcavnce qkqeyiqtim mmeesvqhvv mtaiqelmsk espvsvgnda yvdldrqlkk
      181 tteelneala tkeeiaqrch eldmqvaalq eekssllaen qilmerlnqs dsiedpnspa
      241 grrhlqlqtq leqlqeetfr leaakddyri rceelekeia elrqqteelt tlaeeaqslk
      301 deidvlrhss dkvaklesqv esykkkledl gdlrrqvkll eekntmymqn tvsleeelrk
      361 anaarsqlet ykrqavelqn rlseeskkad kldyeckrlk ekvdslqkek drlrterdsl
      421 ketieelrcv qaqegqlstt glmplgrqep sdslaaeiit peikeklirl qhenkmlkln
      481 qegsdnekia llqsllddan lrkneleten rlvnqrllev qsqveelqks lqdqgskaed
      541 aisvllkkkl eehleklhea nnelqkkrai iedleprcnn sslkieelqe alrkkeeemk
      601 qmeerykkyl ekaksvirtl dpkqnqgaap eiqalknqlq erdrmlhsle keyektksqr
      661 emeekfivsa wynmgmtlhk kaaedrlast gsgqsflarq rqatstrrsy pghvqpatas
      721 dvva
//
LOCUS       XP_041326779             722 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Hook homolog 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326779
VERSION     XP_041326779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..722
                     /product="protein Hook homolog 3 isoform X3"
                     /calculated_mol_wt=83238
     Region          8..160
                     /region_name="HkD_SF"
                     /note="Hook domain-containing proteins superfamily;
                     cl41774"
                     /db_xref="CDD:425405"
     Site            order(127,144,147..148,150..151,154..155,158)
                     /site_type="other"
                     /note="LIC-binding interface [polypeptide binding]"
                     /db_xref="CDD:411797"
     Region          184..709
                     /region_name="HOOK"
                     /note="HOOK protein coiled-coil region; pfam05622"
                     /db_xref="CDD:461694"
     CDS             1..722
                     /gene="HOOK3"
                     /coded_by="XM_041470845.1:68..2236"
                     /db_xref="GeneID:121355415"
ORIGIN      
        1 mfnveslera elgeslltwi qtfnveapcq tvedltsgvv maqvlqkidp ayfdenwlnr
       61 iktevgdnwr lkvsnlkkil kgildynhei lgqqindftl pdvnligeha daaelgrmlq
      121 lilgcavnce qkqeyiqtim mmeesvqhvv mtaiqelmsk espvsvgnda yvdldrqlkk
      181 tteelneala tkeeiaqrch eldmqvaalq eekssllaen qilmerlnqs dsiedpnspa
      241 grrhlqlqtq leqlqeetfr leaakddyri rceelekeia elrqqteelt tlaeeaqslk
      301 deidvlrhss dkvaklesqv esykkkledl gdlrrqvkll eekntmymqn tvsleeelrk
      361 anaarsqlet ykrqavelqn rlseeskkad kldyeckrlk ekvdslqkek drlrterdsl
      421 ketieelrcv qaqegqlstt glmplgrqep sdslaaeiit peikeklirl qhenkmlkln
      481 qegsdnekia llqsllddan lrkneleten rlvnqrllev qsqveelqks lqdqgskaed
      541 svllkkklee hleklheann elqkkraiie dleprcnnss lkieelqeal rkkeeemkqm
      601 eerykkylek aksvirtldp kqnqgaapei qalknqlqer drmlhsleke yektksqrem
      661 eekfivsawy nmgmtlhkka aedrlastgs gqsflarqrq atstrrsypg hvqpatasdv
      721 va
//
LOCUS       XP_041326788             718 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Hook homolog 3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326788
VERSION     XP_041326788.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470854.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..718
                     /product="protein Hook homolog 3 isoform X4"
                     /calculated_mol_wt=82922
     Region          8..160
                     /region_name="HkD_SF"
                     /note="Hook domain-containing proteins superfamily;
                     cl41774"
                     /db_xref="CDD:425405"
     Site            order(127,144,147..148,150..151,154..155,158)
                     /site_type="other"
                     /note="LIC-binding interface [polypeptide binding]"
                     /db_xref="CDD:411797"
     Region          184..709
                     /region_name="HOOK"
                     /note="HOOK protein coiled-coil region; pfam05622"
                     /db_xref="CDD:461694"
     CDS             1..718
                     /gene="HOOK3"
                     /coded_by="XM_041470854.1:68..2224"
                     /db_xref="GeneID:121355415"
ORIGIN      
        1 mfnveslera elgeslltwi qtfnveapcq tvedltsgvv maqvlqkidp ayfdenwlnr
       61 iktevgdnwr lkvsnlkkil kgildynhei lgqqindftl pdvnligeha daaelgrmlq
      121 lilgcavnce qkqeyiqtim mmeesvqhvv mtaiqelmsk espvsvgnda yvdldrqlkk
      181 tteelneala tkeeiaqrch eldmqvaalq eekssllaen qilmerlnqs dsiedpnspa
      241 grrhlqlqtq leqlqeetfr leaakddyri rceelekeia elrqqteelt tlaeeaqslk
      301 deidvlrhss dkvaklesqv esykkkledl gdlrrqvkll eekntmymqn tvsleeelrk
      361 anaarsqlet ykrqavelqn rlseeskkad kldyeckrlk ekvdslqkek drlrterdsl
      421 ketieelrcv qaqegqlstt glmplgrqep sdslaaeiit peikeklirl qhenkmlkln
      481 qegsdnekia llqsllddan lrkneleten rlvnqrllev qsqveelqks lqdqgskaed
      541 svllkkklee hleklheann elqkkraiie dleprcnnss lkieelqeal rkkeeemkqm
      601 eerykkylek aksvirtldp kqnqgaapei qalknqlqer drmlhsleke yektksqrem
      661 eekfivsawy nmgmtlhkka aedrlastgs gqsflarqrq atstrrsypg hvqpatar
//
LOCUS       XP_041326800             257 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326800
VERSION     XP_041326800.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470866.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X1"
                     /calculated_mol_wt=29416
     Region          85..141
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          203..238
                     /region_name="DUF1232"
                     /note="Protein of unknown function (DUF1232); pfam06803"
                     /db_xref="CDD:462011"
     CDS             1..257
                     /gene="RNF170"
                     /coded_by="XM_041470866.1:123..896"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mashqaevqs lkldndsvie gvsdqvlvav vlsftfiaal vytllrnehq nihpenqelv
       61 ralrqqlqtd qqdasagdrh rfytdmscpv clqqatfpie tncghlfcgs ciiaywrygs
      121 wlgaircpic rqtvtlflpl fgedqqgaaq vfqdvndynr rfsgqprsim erimdlptll
      181 rhafremfsv gglfwmfrir iflcligall ylaspldflp ealfgilgfl ddffviflll
      241 iyisimyrev vtqrlnr
//
LOCUS       XP_041326809             257 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326809
VERSION     XP_041326809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X1"
                     /calculated_mol_wt=29416
     Region          85..141
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          203..238
                     /region_name="DUF1232"
                     /note="Protein of unknown function (DUF1232); pfam06803"
                     /db_xref="CDD:462011"
     CDS             1..257
                     /gene="RNF170"
                     /coded_by="XM_041470875.1:285..1058"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mashqaevqs lkldndsvie gvsdqvlvav vlsftfiaal vytllrnehq nihpenqelv
       61 ralrqqlqtd qqdasagdrh rfytdmscpv clqqatfpie tncghlfcgs ciiaywrygs
      121 wlgaircpic rqtvtlflpl fgedqqgaaq vfqdvndynr rfsgqprsim erimdlptll
      181 rhafremfsv gglfwmfrir iflcligall ylaspldflp ealfgilgfl ddffviflll
      241 iyisimyrev vtqrlnr
//
LOCUS       XP_041326821             257 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326821
VERSION     XP_041326821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X1"
                     /calculated_mol_wt=29416
     Region          85..141
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          203..238
                     /region_name="DUF1232"
                     /note="Protein of unknown function (DUF1232); pfam06803"
                     /db_xref="CDD:462011"
     CDS             1..257
                     /gene="RNF170"
                     /coded_by="XM_041470887.1:85..858"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mashqaevqs lkldndsvie gvsdqvlvav vlsftfiaal vytllrnehq nihpenqelv
       61 ralrqqlqtd qqdasagdrh rfytdmscpv clqqatfpie tncghlfcgs ciiaywrygs
      121 wlgaircpic rqtvtlflpl fgedqqgaaq vfqdvndynr rfsgqprsim erimdlptll
      181 rhafremfsv gglfwmfrir iflcligall ylaspldflp ealfgilgfl ddffviflll
      241 iyisimyrev vtqrlnr
//
LOCUS       XP_041326835             257 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326835
VERSION     XP_041326835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X1"
                     /calculated_mol_wt=29416
     Region          85..141
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          203..238
                     /region_name="DUF1232"
                     /note="Protein of unknown function (DUF1232); pfam06803"
                     /db_xref="CDD:462011"
     CDS             1..257
                     /gene="RNF170"
                     /coded_by="XM_041470901.1:141..914"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mashqaevqs lkldndsvie gvsdqvlvav vlsftfiaal vytllrnehq nihpenqelv
       61 ralrqqlqtd qqdasagdrh rfytdmscpv clqqatfpie tncghlfcgs ciiaywrygs
      121 wlgaircpic rqtvtlflpl fgedqqgaaq vfqdvndynr rfsgqprsim erimdlptll
      181 rhafremfsv gglfwmfrir iflcligall ylaspldflp ealfgilgfl ddffviflll
      241 iyisimyrev vtqrlnr
//
LOCUS       XP_041326843             256 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326843
VERSION     XP_041326843.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470909.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X2"
                     /calculated_mol_wt=29288
     Region          84..140
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          202..237
                     /region_name="DUF1232"
                     /note="Protein of unknown function (DUF1232); pfam06803"
                     /db_xref="CDD:462011"
     CDS             1..256
                     /gene="RNF170"
                     /coded_by="XM_041470909.1:105..875"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mashqaevqs lkldndsvie gvsdqvlvav vlsftfiaal vytllrnehq nihpenqelv
       61 ralrqqlqtd qdasagdrhr fytdmscpvc lqqatfpiet ncghlfcgsc iiaywrygsw
      121 lgaircpicr qtvtlflplf gedqqgaaqv fqdvndynrr fsgqprsime rimdlptllr
      181 hafremfsvg glfwmfriri flcligally laspldflpe alfgilgfld dffvifllli
      241 yisimyrevv tqrlnr
//
LOCUS       XP_041326853             172 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326853
VERSION     XP_041326853.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470919.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X3"
                     /calculated_mol_wt=19801
     Region          1..56
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          <120..>159
                     /region_name="YkvA"
                     /note="Uncharacterized membrane protein YkvA, DUF1232
                     family [Function unknown]; COG3339"
                     /db_xref="CDD:442568"
     CDS             1..172
                     /gene="RNF170"
                     /coded_by="XM_041470919.1:311..829"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mscpvclqqa tfpietncgh lfcgsciiay wrygswlgai rcpicrqtvt lflplfgedq
       61 qgaaqvfqdv ndynrrfsgq prsimerimd lptllrhafr emfsvgglfw mfririflcl
      121 igallylasp ldflpealfg ilgflddffv ifllliyisi myrevvtqrl nr
//
LOCUS       XP_041326862             172 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326862
VERSION     XP_041326862.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470928.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X3"
                     /calculated_mol_wt=19801
     Region          1..56
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          <120..>159
                     /region_name="YkvA"
                     /note="Uncharacterized membrane protein YkvA, DUF1232
                     family [Function unknown]; COG3339"
                     /db_xref="CDD:442568"
     CDS             1..172
                     /gene="RNF170"
                     /coded_by="XM_041470928.1:213..731"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mscpvclqqa tfpietncgh lfcgsciiay wrygswlgai rcpicrqtvt lflplfgedq
       61 qgaaqvfqdv ndynrrfsgq prsimerimd lptllrhafr emfsvgglfw mfririflcl
      121 igallylasp ldflpealfg ilgflddffv ifllliyisi myrevvtqrl nr
//
LOCUS       XP_041326870             172 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326870
VERSION     XP_041326870.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470936.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X3"
                     /calculated_mol_wt=19801
     Region          1..56
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          <120..>159
                     /region_name="YkvA"
                     /note="Uncharacterized membrane protein YkvA, DUF1232
                     family [Function unknown]; COG3339"
                     /db_xref="CDD:442568"
     CDS             1..172
                     /gene="RNF170"
                     /coded_by="XM_041470936.1:186..704"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mscpvclqqa tfpietncgh lfcgsciiay wrygswlgai rcpicrqtvt lflplfgedq
       61 qgaaqvfqdv ndynrrfsgq prsimerimd lptllrhafr emfsvgglfw mfririflcl
      121 igallylasp ldflpealfg ilgflddffv ifllliyisi myrevvtqrl nr
//
LOCUS       XP_041326874             172 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326874
VERSION     XP_041326874.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470940.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X3"
                     /calculated_mol_wt=19801
     Region          1..56
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          <120..>159
                     /region_name="YkvA"
                     /note="Uncharacterized membrane protein YkvA, DUF1232
                     family [Function unknown]; COG3339"
                     /db_xref="CDD:442568"
     CDS             1..172
                     /gene="RNF170"
                     /coded_by="XM_041470940.1:314..832"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mscpvclqqa tfpietncgh lfcgsciiay wrygswlgai rcpicrqtvt lflplfgedq
       61 qgaaqvfqdv ndynrrfsgq prsimerimd lptllrhafr emfsvgglfw mfririflcl
      121 igallylasp ldflpealfg ilgflddffv ifllliyisi myrevvtqrl nr
//
LOCUS       XP_041326884             172 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326884
VERSION     XP_041326884.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470950.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X3"
                     /calculated_mol_wt=19801
     Region          1..56
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          <120..>159
                     /region_name="YkvA"
                     /note="Uncharacterized membrane protein YkvA, DUF1232
                     family [Function unknown]; COG3339"
                     /db_xref="CDD:442568"
     CDS             1..172
                     /gene="RNF170"
                     /coded_by="XM_041470950.1:189..707"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mscpvclqqa tfpietncgh lfcgsciiay wrygswlgai rcpicrqtvt lflplfgedq
       61 qgaaqvfqdv ndynrrfsgq prsimerimd lptllrhafr emfsvgglfw mfririflcl
      121 igallylasp ldflpealfg ilgflddffv ifllliyisi myrevvtqrl nr
//
LOCUS       XP_041326893             257 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326893
VERSION     XP_041326893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470959.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X1"
                     /calculated_mol_wt=29416
     Region          85..141
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          203..238
                     /region_name="DUF1232"
                     /note="Protein of unknown function (DUF1232); pfam06803"
                     /db_xref="CDD:462011"
     CDS             1..257
                     /gene="RNF170"
                     /coded_by="XM_041470959.1:125..898"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mashqaevqs lkldndsvie gvsdqvlvav vlsftfiaal vytllrnehq nihpenqelv
       61 ralrqqlqtd qqdasagdrh rfytdmscpv clqqatfpie tncghlfcgs ciiaywrygs
      121 wlgaircpic rqtvtlflpl fgedqqgaaq vfqdvndynr rfsgqprsim erimdlptll
      181 rhafremfsv gglfwmfrir iflcligall ylaspldflp ealfgilgfl ddffviflll
      241 iyisimyrev vtqrlnr
//
LOCUS       XP_041326903             172 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF170 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326903
VERSION     XP_041326903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="E3 ubiquitin-protein ligase RNF170 isoform X3"
                     /calculated_mol_wt=19801
     Region          1..56
                     /region_name="RING-HC_RNF170"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 170 (RNF170) and similar proteins; cd16553"
                     /db_xref="CDD:438215"
     Region          <120..>159
                     /region_name="YkvA"
                     /note="Uncharacterized membrane protein YkvA, DUF1232
                     family [Function unknown]; COG3339"
                     /db_xref="CDD:442568"
     CDS             1..172
                     /gene="RNF170"
                     /coded_by="XM_041470969.1:231..749"
                     /db_xref="GeneID:121355440"
ORIGIN      
        1 mscpvclqqa tfpietncgh lfcgsciiay wrygswlgai rcpicrqtvt lflplfgedq
       61 qgaaqvfqdv ndynrrfsgq prsimerimd lptllrhafr emfsvgglfw mfririflcl
      121 igallylasp ldflpealfg ilgflddffv ifllliyisi myrevvtqrl nr
//
LOCUS       XP_041326916             334 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: transmembrane protein 271 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326916
VERSION     XP_041326916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470982.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="LOW QUALITY PROTEIN: transmembrane protein 271"
                     /calculated_mol_wt=33677
     CDS             1..334
                     /gene="TMEM271"
                     /coded_by="XM_041470982.1:1..1005"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121355500"
ORIGIN      
        1 mkwsvrgaca alssclllac alsaaavglk cfslgselkg epfrlgtaag afysglllaa
       61 glsllaaall ccrppdeapv apapapapap apapasalap agdpdpasgg pggaeaaaap
      121 sgpvekaspg grqnflllgv lvfmlgvlsa fagavidgdt vslverkysh ycllqpggaa
      181 rprsgpaapd gtaaalrcqk lrdyqqglvl stvfnalecl lgllnlllvk nyxgggrrap
      241 rhsqgslfsg gepelspgdc pfqavsyinv gvfhvfdeag vevhcgghps velpgyspmd
      301 pelnasypyc yplpseqppa yeeiypgepc ahgt
//
LOCUS       XP_041326927             196 aa            linear   VRT 06-MAY-2021
DEFINITION  purpurin [Pyrgilauda ruficollis].
ACCESSION   XP_041326927
VERSION     XP_041326927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..196
                     /product="purpurin"
                     /calculated_mol_wt=21853
     Region          24..196
                     /region_name="lipocalin_RBP_like"
                     /note="retinol-binding protein 4 and similar proteins;
                     cd00743"
                     /db_xref="CDD:381184"
     Site            order(40,44,49,52,55..57,63,65,73,75..77,81,83,93..95,97,
                     108,110,112,118..120,124,126,128,137,139,141,143,155,157,
                     159)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381184"
     Site            order(49,52,55..57,63,65,75..77,81,83,93..95,97,110,112,
                     118..120,124,126,139,143,155,157,159)
                     /site_type="other"
                     /note="retinol binding site [chemical binding]"
                     /db_xref="CDD:381184"
     Site            order(83..87,111,113,117..121)
                     /site_type="other"
                     /note="transthyretin interface [polypeptide binding]"
                     /db_xref="CDD:381184"
     CDS             1..196
                     /gene="LOC121355509"
                     /coded_by="XM_041470993.1:1148..1738"
                     /db_xref="GeneID:121355509"
ORIGIN      
        1 mkyaqyvfla svcytveysl aqtcavesfs vkdnfdpkry agkwyalakk dpeglflqdn
       61 isaeytveed gtmtasskgr vklfgfwvic admaaqytvp dpttpakmym tyqglasyls
      121 sggdnywvid tdydnyaity acrslkedgs cddgyslifs rnprglppai qrivrqkqee
      181 icmsgqfqpv lqsgac
//
LOCUS       XP_041326934             196 aa            linear   VRT 06-MAY-2021
DEFINITION  purpurin [Pyrgilauda ruficollis].
ACCESSION   XP_041326934
VERSION     XP_041326934.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471000.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..196
                     /product="purpurin"
                     /calculated_mol_wt=21853
     Region          24..196
                     /region_name="lipocalin_RBP_like"
                     /note="retinol-binding protein 4 and similar proteins;
                     cd00743"
                     /db_xref="CDD:381184"
     Site            order(40,44,49,52,55..57,63,65,73,75..77,81,83,93..95,97,
                     108,110,112,118..120,124,126,128,137,139,141,143,155,157,
                     159)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381184"
     Site            order(49,52,55..57,63,65,75..77,81,83,93..95,97,110,112,
                     118..120,124,126,139,143,155,157,159)
                     /site_type="other"
                     /note="retinol binding site [chemical binding]"
                     /db_xref="CDD:381184"
     Site            order(83..87,111,113,117..121)
                     /site_type="other"
                     /note="transthyretin interface [polypeptide binding]"
                     /db_xref="CDD:381184"
     CDS             1..196
                     /gene="LOC121355509"
                     /coded_by="XM_041471000.1:249..839"
                     /db_xref="GeneID:121355509"
ORIGIN      
        1 mkyaqyvfla svcytveysl aqtcavesfs vkdnfdpkry agkwyalakk dpeglflqdn
       61 isaeytveed gtmtasskgr vklfgfwvic admaaqytvp dpttpakmym tyqglasyls
      121 sggdnywvid tdydnyaity acrslkedgs cddgyslifs rnprglppai qrivrqkqee
      181 icmsgqfqpv lqsgac
//
LOCUS       XP_041326948             434 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041326948
VERSION     XP_041326948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="tripartite motif-containing protein 14"
                     /calculated_mol_wt=49917
     Region          14..57
                     /region_name="Bbox2_TRIM14"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 14 (TRIM14) and similar proteins;
                     cd19768"
                     /db_xref="CDD:380826"
     Region          261..433
                     /region_name="SPRY_PRY_TRIM14"
                     /note="PRY/SPRY domain of tripartite motif-binding protein
                     14 (TRIM14); cd13738"
                     /db_xref="CDD:293973"
     CDS             1..434
                     /gene="TRIM14"
                     /coded_by="XM_041471014.1:6..1310"
                     /db_xref="GeneID:121355524"
ORIGIN      
        1 maqgepraaa pgarlcaaha grplelfced cgccvcalcp algahrghra cllpqavrrt
       61 qelmalclkn leerkeeedg nrrsieqavn dvkahadmik rqlsekvtel qlllreeesl
      121 akifidektq qalgthdqhl rscqeqleal etfthrirqi qqdsdpihll ekyteiekei
      181 kesrhplekw hpiplsfehl lnhykhfira lqsilqkple arlkedvfss lnptakkepg
      241 tvlktktpvd rllflkhars ptweydsihp rlklsddrle vscswrkily pcspqrfdkl
      301 wqvlsrdafl sgshywevdl lragagwwig aayptigrkg dseacrlgwn raswclkkfd
      361 feywafhkge ripilieddp dcigifldye agilsfynvs dgmahlhtfc ckftepvypa
      421 lrlwegsirt cklt
//
LOCUS       XP_041326961             836 aa            linear   VRT 06-MAY-2021
DEFINITION  rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326961
VERSION     XP_041326961.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471027.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..836
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..836
                     /product="rod cGMP-specific 3',5'-cyclic phosphodiesterase
                     subunit beta"
                     /calculated_mol_wt=96560
     Region          52..211
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          233..420
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          537..781
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..836
                     /gene="PDE6B"
                     /coded_by="XM_041471027.1:153..2663"
                     /db_xref="GeneID:121355531"
ORIGIN      
        1 msiseddvek fldgnpafak qyfekklkte swdnneseil feliqdmqes inmekvvfkt
       61 lrrirsliha drcslfmyrq rngtpelatr lfniqegstl eeclvapdce ivypldigiv
      121 ghvaqtkktm nikdvrecaq fspfvdeltd yttknilatp ilngkdlvav ivainklngp
      181 hftssdetlf lkylnfasln lkiyhlsylh ncetrrgqvl lwsankvfee ltdierqfhk
      241 afytvrayln cdrysvglld mtkqkeffdl wpvllgevpp ysgprtpdgr eivfykvidy
      301 ilhgkedikv ipnptpdhwa lvtglpayva esgficnimn aaademfnfq egpldesgwi
      361 iknvlsmpiv nkreeivgvv tfynrkdgkp fdeqdetlme sltqflgwsv lntdtydkmn
      421 klenrkdiaq dmvlyhvkcd kdeiqeilpt reklgkepse cdeeelasil keelpgptkf
      481 eiyefrfsdf dctelelvkc giqmyyelgv vkkfqipqev lvrfvysvsk gyrkityhnw
      541 rhgfnvaqtm ftllmtgklk ryytdleala mvtaalchdi dhrgtnnlyq mksqnplakl
      601 hgssilerhh lefgkfllse eslnicqnln rrqhehvihl meiaiiatdl alyfkkrtmf
      661 qkivdeckty dsvtawteyl slettkkevv mammmtacdl saitkpwevq skvallvaae
      721 fweqgdleis vlqqqpipmm drrkaaelpk lqvgfidfvc tfvykefsrf heeiqpmldg
      781 llnnrnewkt radeydakik aleeekkkee ermaakqgei tcnggtapas ktcsil
//
LOCUS       XP_041326972             553 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KCMF1-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326972
VERSION     XP_041326972.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471038.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..553
                     /product="LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
                     KCMF1-like"
                     /calculated_mol_wt=58944
     Region          182..230
                     /region_name="ZZ_PCMF_like"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     potassium channel modulatory factor (PCMF) 1 and related
                     proteins. The ZZ motif coordinates two zinc ions and most
                     likely participates in ligand binding or molecular
                     scaffolding. Human potassium channel...; cd02338"
                     /db_xref="CDD:239078"
     Site            order(184,187,199,202,208,211,221,225)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239078"
     Site            order(184,187,208,211)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239078"
     Site            order(185,196,198,204,206)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239078"
     Site            order(197,212,227,230)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239078"
     Site            order(199,202,221,225)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239078"
     Region          251..312
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     CDS             1..553
                     /gene="LOC121355537"
                     /coded_by="XM_041471038.1:1..1662"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121355537"
ORIGIN      
        1 mrvlrvrpgl gsvsstaslp ragalarqpa reghrpagel plppvarpgr eeegegagag
       61 kaparpppsl vrqgrggagg gasgrrgpes pchgareava agsaprrase eaggggeggg
      121 grpaprrllc frplpgpapa pllshrgggg grgrsgaraa rgspgtglgr rlwtrmsrhe
      181 gvscdaclkg nfrgrrykcl icydydlcat cyesgatttr httdhpmqci ltrvdfdlyy
      241 ggeafsveqp qsftcpycgk mgytetslqe hvtsehaets tevicpicaa lpggdpnhvt
      301 ddfaahltle hraprdldes sgvrhvrrmf hpgrglggpr arrsnmhftt sspgglsssq
      361 ssyspsnrea mdpiaellsq lsgvrrsagg qlnssgpsas qlqqlqmqlq lerqhaqaar
      421 qqletarnat rrtntinvnt tmtqsttttn tsntensqqt iqnsqflltr lndpkmseae
      481 rqsmeserad cslfvqelll stlmqeesss sdedergeia dfgamgcvdi mpldvalenl
      541 nlkennkgne ppl
//
LOCUS       XP_041326985             292 aa            linear   VRT 06-MAY-2021
DEFINITION  complexin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326985
VERSION     XP_041326985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471051.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..292
                     /product="complexin-1"
                     /calculated_mol_wt=31662
     Region          151..>219
                     /region_name="Synaphin"
                     /note="Synaphin protein; pfam05835"
                     /db_xref="CDD:461755"
     CDS             1..292
                     /gene="CPLX1"
                     /coded_by="XM_041471051.1:1..879"
                     /db_xref="GeneID:121355548"
ORIGIN      
        1 mgwgtrmqah aphrgvrgap pacsaasteg rgrrregage peagggresg srnegrrkeg
       61 pcrwdgrscg lipsprlrar nfpgnlrahg rrpepvgder srssrhlpqp paparpvsaq
      121 rlspseaafq gfpvsvhvrc eggqdpkqqi mdfvmkqalg gatkdmgkml ggdeekdpda
      181 akkeeerqea lrqqeeerka kyakmeaere vmrqgirdkg agkldqqqsd veqegkmqsp
      241 ahgkeknsht vgdkqldcst aqkdlgvlvd skltmslqgt lrvaqgeklp ag
//
LOCUS       XP_041326997             642 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 49 member A3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326997
VERSION     XP_041326997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471063.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="solute carrier family 49 member A3"
                     /calculated_mol_wt=69026
     Region          54..>193
                     /region_name="PHA03381"
                     /note="tegument protein VP22; Provisional"
                     /db_xref="CDD:177618"
     Region          196..612
                     /region_name="MFS_MFSD7"
                     /note="Major facilitator superfamily domain-containing
                     protein 7; cd17399"
                     /db_xref="CDD:340957"
     Site            order(211..212,215..216,219,251,310..311,313..315,318,338,
                     341..342,345,425,428..429,432..434,437,464,468,522..523,
                     527,531,547,550..551,554..555,558)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340957"
     CDS             1..642
                     /gene="SLC49A3"
                     /coded_by="XM_041471063.1:1..1929"
                     /db_xref="GeneID:121355556"
ORIGIN      
        1 mtylvderka vdvvsvnpde afdtishsfl leklavhgld wctlgwsffc sskrsplgqg
       61 csrkaspgsc rhhhpqlrqm plgccpeata ngdyhgnaep srhtsrrgvs lpgqppsahl
      121 sspgaergaf prrgarqarp aprgragarp gaaprrghar saapaapsra aegseaasll
      181 gesslgppar fktyrrrwfl lavvcllncs namlwltfap vadktaayfh isletvnwls
      241 mvyllisipf glvatwvlds vglrcavvls awlnmvgsit rmfsvlkfls lgsqnywylf
      301 vgqcfsalaq pliifsptkl aalwfpdhqr atanmiasms nplgilianl lspalvpegk
      361 hiplmlgiya vpavtacala tlgihekvpp tppsasatns nsqpfftglk mllrnkpyii
      421 lavcfgggig mftcfsalle qilcekgysn dfaglngalf tvcgllgafl lgmyvdrtrk
      481 fiestkisfc lsalasimfa vtsrfrhqai mlaitsslfg ffgfaiypia melavecsyp
      541 vgegtstgli fvasqiegvi lmillqaltv hvsedpfstc aldedgaldw ttpvlvlagl
      601 csgmacfyvi ffhtdykrlh aetisadlvk aedaatahvp es
//
LOCUS       XP_041327009             288 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor jun-D-like [Pyrgilauda ruficollis].
ACCESSION   XP_041327009
VERSION     XP_041327009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471075.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="transcription factor jun-D-like"
                     /calculated_mol_wt=29529
     Region          <31..159
                     /region_name="Jun"
                     /note="Jun-like transcription factor; pfam03957"
                     /db_xref="CDD:461108"
     Region          188..247
                     /region_name="bZIP_Jun"
                     /note="Basic leucine zipper (bZIP) domain of Jun proteins
                     and similar proteins: a DNA-binding and dimerization
                     domain; cd14696"
                     /db_xref="CDD:269844"
     Region          189..240
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269844"
     Site            order(193,195..197,199..204,206..208)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269844"
     Site            order(207..208,210..211,213..215,217..218,221..222,
                     224..225,227..229,231..232,235..236,239,242,245..247)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269844"
     CDS             1..288
                     /gene="LOC121355563"
                     /coded_by="XM_041471075.1:1..867"
                     /db_xref="GeneID:121355563"
ORIGIN      
        1 msggrsgrsa vkmeapfype eglellpdfv plpgfvyrqp vtqeqegfad gfvkaladlh
       61 kqnqllaapp plsapgpcct arpgppgapa taaadppavy tnlsgfnpag plspsgsayp
      121 sasapppppg lafgaaglgs grlpparsle epqtvpevpp saggeggssa ptppslspld
      181 aesqerlkae rkrlrnriaa skcrrrkler iarleekvka lkgqnaelaa tanllraqvt
      241 qlqgrvrshl ssgchinaag hpppphaaaq pretppeaaa aapetsac
//
LOCUS       XP_041327023             988 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI ethanolamine phosphate transferase 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327023
VERSION     XP_041327023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..988
                     /product="GPI ethanolamine phosphate transferase 2 isoform
                     X1"
                     /calculated_mol_wt=109707
     Region          64..336
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(76..77,117,221,269..270)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(76,117,221,270)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     Region          649..960
                     /region_name="PIGO_PIGG"
                     /note="GPI ethanolamine phosphate transferase membrane
                     region; pfam19316"
                     /db_xref="CDD:437148"
     CDS             1..988
                     /gene="PIGG"
                     /coded_by="XM_041471089.1:52..3018"
                     /db_xref="GeneID:121355569"
ORIGIN      
        1 mrlrsgvfas scllvqalgv alflrgffpv pvrsvprrea radppaepap pgpgmvsnwt
       61 kippplfkkv vivlidalrd dfmfgskgkq fmpyttqvve kgtsysfiae akpptvtmpr
      121 ikalmtgsip gfidvvvnln spallddnli wqaktagkri ifygddtwvk lfpkhfveyd
      181 gttsffvsdf tevddnvtrh ldrvlkredw dllilhylgl dhighmtgpn splvgpklre
      241 mdnilkkihi sllskeeasf pnllvvcgdh gmsetgshgg ssegevhtpl lfissafgkr
      301 saplaqpehv qqtdlastla iglglpisrn svgnlilpvv ggktmreqlr fvhlngfqls
      361 rllqentpay ekdpgyehfk iaekshgnwi klylegnnse illnlgkkvl kqylealktl
      421 ssslskqvaq ydmysmmvgt viimevlill llsvpkalsk raefevplsp plfsllfylm
      481 clmlcavhvi vctsaeslcy fcsmswltav gvmmlisalm cgilsavaki fenyrlppkn
      541 pvvssynwse idvlilagti ghvlslgass fieeehqtwy flintlclvl cqelcrnnfl
      601 lkepdpqhst nvkqnfdsig essecknidi paacnsklgk atsssefikg sdkwislatp
      661 wiiliccrll rslnqtgvqw ahrpdfghwl tssehksels flaavsllmi fflvqrrcsl
      721 vskiamalgl lgvysyrasi gnvafpwqhg gkdiskgite arfvyvfvlg ivftgtkdll
      781 ksqvisadss mkstglwevy sglvllaall frphnlpvlv fclliqtmmt kyiwrplkfd
      841 aaqitimhyw fgqaffyfqg nsngiatvdi sagfvgldsy veipaiflta fatyagpflw
      901 aihllcylss evsrnsaavg hgcfcyalmr sipvaiyvvl vtglryhlfi wsvfspklly
      961 egvhvfitaa vclfftamdq nhsykvqd
//
LOCUS       XP_041327032             934 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI ethanolamine phosphate transferase 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327032
VERSION     XP_041327032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..934
                     /product="GPI ethanolamine phosphate transferase 2 isoform
                     X2"
                     /calculated_mol_wt=104010
     Region          10..282
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(22..23,63,167,215..216)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(22,63,167,216)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     Region          595..906
                     /region_name="PIGO_PIGG"
                     /note="GPI ethanolamine phosphate transferase membrane
                     region; pfam19316"
                     /db_xref="CDD:437148"
     CDS             1..934
                     /gene="PIGG"
                     /coded_by="XM_041471098.1:148..2952"
                     /db_xref="GeneID:121355569"
ORIGIN      
        1 mvsnwtkipp plfkkvvivl idalrddfmf gskgkqfmpy ttqvvekgts ysfiaeakpp
       61 tvtmprikal mtgsipgfid vvvnlnspal lddnliwqak tagkriifyg ddtwvklfpk
      121 hfveydgtts ffvsdftevd dnvtrhldrv lkredwdlli lhylgldhig hmtgpnsplv
      181 gpklremdni lkkihislls keeasfpnll vvcgdhgmse tgshggsseg evhtpllfis
      241 safgkrsapl aqpehvqqtd lastlaiglg lpisrnsvgn lilpvvggkt mreqlrfvhl
      301 ngfqlsrllq entpayekdp gyehfkiaek shgnwiklyl egnnseilln lgkkvlkqyl
      361 ealktlsssl skqvaqydmy smmvgtviim evlillllsv pkalskraef evplspplfs
      421 llfylmclml cavhvivcts aeslcyfcsm swltavgvmm lisalmcgil savakifeny
      481 rlppknpvvs synwseidvl ilagtighvl slgassfiee ehqtwyflin tlclvlcqel
      541 crnnfllkep dpqhstnvkq nfdsigesse cknidipaac nsklgkatss sefikgsdkw
      601 islatpwiil iccrllrsln qtgvqwahrp dfghwltsse hkselsflaa vsllmifflv
      661 qrrcslvski amalgllgvy syrasignva fpwqhggkdi skgitearfv yvfvlgivft
      721 gtkdllksqv isadssmkst glwevysglv llaallfrph nlpvlvfcll iqtmmtkyiw
      781 rplkfdaaqi timhywfgqa ffyfqgnsng iatvdisagf vgldsyveip aifltafaty
      841 agpflwaihl lcylssevsr nsaavghgcf cyalmrsipv aiyvvlvtgl ryhlfiwsvf
      901 spkllyegvh vfitaavclf ftamdqnhsy kvqd
//
LOCUS       XP_041327040             713 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI ethanolamine phosphate transferase 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327040
VERSION     XP_041327040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..713
                     /product="GPI ethanolamine phosphate transferase 2 isoform
                     X3"
                     /calculated_mol_wt=79238
     Region          64..336
                     /region_name="GPI_EPT_2"
                     /note="GPI ethanolamine phosphate transferase 2; PIG-G;
                     cd16024"
                     /db_xref="CDD:293748"
     Site            order(76..77,117,221,269..270)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293748"
     Site            order(76,117,221,270)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293748"
     CDS             1..713
                     /gene="PIGG"
                     /coded_by="XM_041471106.1:52..2193"
                     /db_xref="GeneID:121355569"
ORIGIN      
        1 mrlrsgvfas scllvqalgv alflrgffpv pvrsvprrea radppaepap pgpgmvsnwt
       61 kippplfkkv vivlidalrd dfmfgskgkq fmpyttqvve kgtsysfiae akpptvtmpr
      121 ikalmtgsip gfidvvvnln spallddnli wqaktagkri ifygddtwvk lfpkhfveyd
      181 gttsffvsdf tevddnvtrh ldrvlkredw dllilhylgl dhighmtgpn splvgpklre
      241 mdnilkkihi sllskeeasf pnllvvcgdh gmsetgshgg ssegevhtpl lfissafgkr
      301 saplaqpehv qqtdlastla iglglpisrn svgnlilpvv ggktmreqlr fvhlngfqls
      361 rllqentpay ekdpgyehfk iaekshgnwi klylegnnse illnlgkkvl kqylealktl
      421 ssslskqvaq ydmysmmvgt viimevlill llsvpkalsk raefevplsp plfsllfylm
      481 clmlcavhvi vctsaeslcy fcsmswltav gvmmlisalm cgilsavaki fenyrlppkn
      541 pvvssynwse idvlilagti ghvlslgass fieeehqtwy flintlclvl cqelcrnnfl
      601 lkepdpqhst nvkqnfdsig essecknidi paacnsklgk atsssefikg sdkwislatp
      661 wiiliccrll rslnqtgvqw ahrpdfghwl trqtvkpeky fdgtkskrks dsr
//
LOCUS       XP_041327050             509 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI ethanolamine phosphate transferase 2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327050
VERSION     XP_041327050.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471116.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="GPI ethanolamine phosphate transferase 2 isoform
                     X4"
                     /calculated_mol_wt=56574
     Region          170..481
                     /region_name="PIGO_PIGG"
                     /note="GPI ethanolamine phosphate transferase membrane
                     region; pfam19316"
                     /db_xref="CDD:437148"
     CDS             1..509
                     /gene="PIGG"
                     /coded_by="XM_041471116.1:200..1729"
                     /db_xref="GeneID:121355569"
ORIGIN      
        1 mclmlcavhv ivctsaeslc yfcsmswlta vgvmmlisal mcgilsavak ifenyrlppk
       61 npvvssynws eidvlilagt ighvlslgas sfieeehqtw yflintlclv lcqelcrnnf
      121 llkepdpqhs tnvkqnfdsi gessecknid ipaacnsklg katsssefik gsdkwislat
      181 pwiiliccrl lrslnqtgvq wahrpdfghw ltssehksel sflaavsllm ifflvqrrcs
      241 lvskiamalg llgvysyras ignvafpwqh ggkdiskgit earfvyvfvl givftgtkdl
      301 lksqvisads smkstglwev ysglvllaal lfrphnlpvl vfclliqtmm tkyiwrplkf
      361 daaqitimhy wfgqaffyfq gnsngiatvd isagfvglds yveipaiflt afatyagpfl
      421 waihllcyls sevsrnsaav ghgcfcyalm rsipvaiyvv lvtglryhlf iwsvfspkll
      481 yegvhvfita avclfftamd qnhsykvqd
//
LOCUS       XP_041327056             509 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI ethanolamine phosphate transferase 2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327056
VERSION     XP_041327056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471122.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="GPI ethanolamine phosphate transferase 2 isoform
                     X4"
                     /calculated_mol_wt=56574
     Region          170..481
                     /region_name="PIGO_PIGG"
                     /note="GPI ethanolamine phosphate transferase membrane
                     region; pfam19316"
                     /db_xref="CDD:437148"
     CDS             1..509
                     /gene="PIGG"
                     /coded_by="XM_041471122.1:204..1733"
                     /db_xref="GeneID:121355569"
ORIGIN      
        1 mclmlcavhv ivctsaeslc yfcsmswlta vgvmmlisal mcgilsavak ifenyrlppk
       61 npvvssynws eidvlilagt ighvlslgas sfieeehqtw yflintlclv lcqelcrnnf
      121 llkepdpqhs tnvkqnfdsi gessecknid ipaacnsklg katsssefik gsdkwislat
      181 pwiiliccrl lrslnqtgvq wahrpdfghw ltssehksel sflaavsllm ifflvqrrcs
      241 lvskiamalg llgvysyras ignvafpwqh ggkdiskgit earfvyvfvl givftgtkdl
      301 lksqvisads smkstglwev ysglvllaal lfrphnlpvl vfclliqtmm tkyiwrplkf
      361 daaqitimhy wfgqaffyfq gnsngiatvd isagfvglds yveipaiflt afatyagpfl
      421 waihllcyls sevsrnsaav ghgcfcyalm rsipvaiyvv lvtglryhlf iwsvfspkll
      481 yegvhvfita avclfftamd qnhsykvqd
//
LOCUS       XP_041327075             511 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal acetylcholine receptor subunit alpha-7-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327075
VERSION     XP_041327075.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471141.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="neuronal acetylcholine receptor subunit
                     alpha-7-like"
                     /calculated_mol_wt=58438
     Region          16..499
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     CDS             1..511
                     /gene="LOC121355591"
                     /coded_by="XM_041471141.1:48..1583"
                     /db_xref="GeneID:121355591"
ORIGIN      
        1 mltekclafv ysalylwssl lfslfnvsqq gesqrrlyre llrnynrler pvmndsqplv
       61 velqlsllqi idvdeknqvl itnawlqmsw vdvylswdqy eypgvqnlrf psdqiwvpdi
      121 llynsaderf datfhtnvlv nysrscqylp pgilkstcyi dvrwfpfdmq kcdlkfgswt
      181 hsgwlidlqm leadisnyis ngewdlvgvp gkrneiyyec ckepypdvty titmrrrtly
      241 yglnllipcv lisglallvf llpadsgeki slgitvllsl tvfmllvaei mpatsdsvpl
      301 iaqyfasimv ivglsvvvtv lvlqfhhhdp qagkmpkwvr villnwcawf lrmkkpgeni
      361 kplsckysys kqqlsinsme vnvlpghqss ngntiysyha mespccpqqn dlgskggkmt
      421 cplsediefv qkkalmdtlp vivkileevq fiamrfrkqd egeeicsewk faaavidrlc
      481 lvaftlfaii ctftilmsap nfieavskdf a
//
LOCUS       XP_041327088             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327088
VERSION     XP_041327088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471154.1:421..1149"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327098             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327098
VERSION     XP_041327098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471164.1:383..1111"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327108             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327108
VERSION     XP_041327108.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471174.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471174.1:553..1281"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327117             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327117
VERSION     XP_041327117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471183.1:277..1005"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327125             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327125
VERSION     XP_041327125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471191.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471191.1:291..1019"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327132             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327132
VERSION     XP_041327132.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471198.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471198.1:340..1068"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327141             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327141
VERSION     XP_041327141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471207.1:490..1218"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327147             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327147
VERSION     XP_041327147.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471213.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471213.1:358..1086"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327158             242 aa            linear   VRT 06-MAY-2021
DEFINITION  polycomb group RING finger protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327158
VERSION     XP_041327158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471224.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="polycomb group RING finger protein 3"
                     /calculated_mol_wt=28158
     Region          4..69
                     /region_name="RING-HC_PCGF3"
                     /note="RING finger found in polycomb group RING finger
                     protein 3 (PCGF3) and similar proteins; cd16735"
                     /db_xref="CDD:438393"
     Site            order(16,20,22..23,26,28..29,31..35,38..41,43..44)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:438393"
     Region          154..236
                     /region_name="RAWUL_PCGF3"
                     /note="RING finger- and WD40-associated ubiquitin-like
                     (RAWUL) domain found in polycomb group RING finger protein
                     3 (PCGF3) and similar proteins; cd17083"
                     /db_xref="CDD:340603"
     CDS             1..242
                     /gene="PCGF3"
                     /coded_by="XM_041471224.1:320..1048"
                     /db_xref="GeneID:121355599"
ORIGIN      
        1 mltrkiklwd inahitcrlc ngylidattv teclhtfcrs clvkyleenn tcptcrivih
       61 qshplqyigh drtmqdivyk lvpglqeaem kkqrefyhkl gmevpgdikg etcstkqhld
      121 shrngetkad eninketsee kqeedndyhr sdeqvsicle cnssklrglk rkwircsaqa
      181 tvlhlkkfia kklnlssfne ldilcneeil gkdhtlkfvv vtrwrfkkap lllhyrpkmd
      241 ll
//
LOCUS       XP_041327176             496 aa            linear   VRT 06-MAY-2021
DEFINITION  endosomal/lysosomal potassium channel TMEM175 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041327176
VERSION     XP_041327176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471242.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="endosomal/lysosomal potassium channel TMEM175
                     isoform X1"
                     /calculated_mol_wt=55452
     Region          28..117
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     Region          255..351
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     CDS             1..496
                     /gene="TMEM175"
                     /coded_by="XM_041471242.1:43..1533"
                     /db_xref="GeneID:121355631"
ORIGIN      
        1 msapraaare rgpglgpepg sstqtshrll aysdallsii atvmilpvah tkihpdqklg
       61 esvqqlllak iavylmtfli vtvawaahvr lfqviehidd vlallnlacm miitflpytf
      121 slmasfpgvp fgiflfsvca vvigliqavi vaygfyhphl lnqqiqesen qnfykhhilk
      181 iilrgpilcf laaifsfffi plsyvllglv ivfphltrli twcknkilgq rgeeeehhsl
      241 etftfylsep lskerveafs dgvyaivatl lildicednv pdpreveekf hgsllealse
      301 ygpnylayfg sfvtigllwf vhhslflyvt katrlmglln ilslafiggl playqltsef
      361 aekshneiea iqvscvitff asifqfaiwt tallneeetl hafaryggke hafmfaklal
      421 ypcvslgaff ltcllsefst aifhlmqivi pfaflalrif vrisltalks vmslsrrkvv
      481 lleeeeacls pnetls
//
LOCUS       XP_041327185             467 aa            linear   VRT 06-MAY-2021
DEFINITION  endosomal/lysosomal potassium channel TMEM175 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041327185
VERSION     XP_041327185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="endosomal/lysosomal potassium channel TMEM175
                     isoform X2"
                     /calculated_mol_wt=52433
     Region          28..117
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     Region          255..351
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     CDS             1..467
                     /gene="TMEM175"
                     /coded_by="XM_041471251.1:43..1446"
                     /db_xref="GeneID:121355631"
ORIGIN      
        1 msapraaare rgpglgpepg sstqtshrll aysdallsii atvmilpvah tkihpdqklg
       61 esvqqlllak iavylmtfli vtvawaahvr lfqviehidd vlallnlacm miitflpytf
      121 slmasfpgvp fgiflfsvca vvigliqavi vaygfyhphl lnqqiqesen qnfykhhilk
      181 iilrgpilcf laaifsfffi plsyvllglv ivfphltrli twcknkilgq rgeeeehhsl
      241 etftfylsep lskerveafs dgvyaivatl lildicednv pdpreveekf hgsllealse
      301 ygpnylayfg sfvtigllwf vhhslflyvt katrlmglln ilslafiggl playqltsef
      361 aekshneiea iqvscvitff asifqfaiwt tallneeetl hafaryggfl clffvwqwni
      421 lllfrrhgvi fkesmrlqcv rvpqsgkgve gvelspelwt akgimcp
//
LOCUS       XP_041327193             447 aa            linear   VRT 06-MAY-2021
DEFINITION  endosomal/lysosomal potassium channel TMEM175 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041327193
VERSION     XP_041327193.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471259.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..447
                     /product="endosomal/lysosomal potassium channel TMEM175
                     isoform X3"
                     /calculated_mol_wt=50277
     Region          28..117
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     Region          255..351
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     CDS             1..447
                     /gene="TMEM175"
                     /coded_by="XM_041471259.1:43..1386"
                     /db_xref="GeneID:121355631"
ORIGIN      
        1 msapraaare rgpglgpepg sstqtshrll aysdallsii atvmilpvah tkihpdqklg
       61 esvqqlllak iavylmtfli vtvawaahvr lfqviehidd vlallnlacm miitflpytf
      121 slmasfpgvp fgiflfsvca vvigliqavi vaygfyhphl lnqqiqesen qnfykhhilk
      181 iilrgpilcf laaifsfffi plsyvllglv ivfphltrli twcknkilgq rgeeeehhsl
      241 etftfylsep lskerveafs dgvyaivatl lildicednv pdpreveekf hgsllealse
      301 ygpnylayfg sfvtigllwf vhhslflyvt katrlmglln ilslafiggl playqltsef
      361 aekshneiea iqvscvitff asifqfaiwt tallneeetl hafaryggfl clffvwqwni
      421 lllfrrhgvi fkesmrlqcv rvpqsag
//
LOCUS       XP_041327200             372 aa            linear   VRT 06-MAY-2021
DEFINITION  endosomal/lysosomal potassium channel TMEM175 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041327200
VERSION     XP_041327200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="endosomal/lysosomal potassium channel TMEM175
                     isoform X4"
                     /calculated_mol_wt=41617
     Region          28..117
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     Region          255..>321
                     /region_name="TMEM175"
                     /note="Endosomal/lysosomal potassium channel TMEM175;
                     pfam06736"
                     /db_xref="CDD:429088"
     CDS             1..372
                     /gene="TMEM175"
                     /coded_by="XM_041471266.1:43..1161"
                     /db_xref="GeneID:121355631"
ORIGIN      
        1 msapraaare rgpglgpepg sstqtshrll aysdallsii atvmilpvah tkihpdqklg
       61 esvqqlllak iavylmtfli vtvawaahvr lfqviehidd vlallnlacm miitflpytf
      121 slmasfpgvp fgiflfsvca vvigliqavi vaygfyhphl lnqqiqesen qnfykhhilk
      181 iilrgpilcf laaifsfffi plsyvllglv ivfphltrli twcknkilgq rgeeeehhsl
      241 etftfylsep lskerveafs dgvyaivatl lildicednv pdpreveekf hgsllealse
      301 ygpnylayfg sfvtigllwl fvsvfclame hpsviqkawc hiqgeyetav cesstiswis
      361 ivlfessklw lp
//
LOCUS       XP_041327213            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  PH and SEC7 domain-containing protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327213
VERSION     XP_041327213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="PH and SEC7 domain-containing protein 3 isoform
                     X1"
                     /calculated_mol_wt=114468
     Region          559..721
                     /region_name="Sec7"
                     /note="Sec7 domain; Domain named after the S. cerevisiae
                     SEC7 gene product. The Sec7 domain is the central domain
                     of the guanine-nucleotide-exchange factors (GEFs) of the
                     ADP-ribosylation factor family of small GTPases (ARFs) .
                     It carries the exchange factor...; cd00171"
                     /db_xref="CDD:238100"
     Site            order(629..636,665..678)
                     /site_type="active"
                     /note="active site/putative ARF binding site [active]"
                     /db_xref="CDD:238100"
     Region          766..891
                     /region_name="PH_EFA6"
                     /note="Exchange Factor for ARF6 Pleckstrin homology (PH)
                     domain; cd13295"
                     /db_xref="CDD:270107"
     CDS             1..1032
                     /gene="PSD3"
                     /coded_by="XM_041471279.1:55..3153"
                     /db_xref="GeneID:121355653"
ORIGIN      
        1 megaggaaet lvrdndisah aqnvakakye flfgleeekp sgmgsgrgss slpphtiine
       61 fpeygtvess rqapsalstc qaepvthspe rrdshhrvrp ipqcaapahn lrpdagavql
      121 htpeeglqpa gnlpeimkis rqleaakvqe rantsldset qmekkcvtgs qnvqaarepv
      181 ptgqeklsdm llpsertaee kkylivekdl asvragekqs essqavsnka eevhtaqeps
      241 chkssvtnle avsrvergtr feefsehnqg kmqtgterrl akeaavskhv efqgveilwl
      301 ekaeeqkrrk hslldsvsve rkafaktssh svspmvspal lslpdsawne vcedprlepa
      361 asgatplpll eesrmdevsv kdrkncgeee mtvlargqgr mveegeaatg gyedflgqrh
      421 sdvstdlyss qfenildnas lyysaeslet lysepdsyfs fempltpmiq qrmkeggqfl
      481 drtsavgqtd vpdrevkgcg egianglrdv setlfkgdit evprlesnvg lqnvvldssa
      541 amgsselqek datgalghdl snggssnlea arrlakrlyh ldrfkrsdva khlgknnefs
      601 klvaeeylkf fdftgmtldc slrsffkafs ligetqerer vlihfssryy qcnpnaissq
      661 dgvhcltcam mllntdlhgh nigkkmtcqe fianlqgmnd gkdfprgllk alynsiknek
      721 lewavdeeek kkshsdgade kdngnqtkav srignsnnpf ldiphdsnaa vyktgflark
      781 ihadmdgkkt prgkrgwktf yavlkgtvly lqkdeykpek alseedlkna vsvhhalask
      841 atdyekkpnv lklktadwrv llfqaqsqee mqtwinkinc vaavfsappf paaigsqkkf
      901 srpllpattt klsqdeqlks heaklkqist elaehrsypp dkklkgkevd dyklkdhyle
      961 feknryeiyv gllkegvkel lsggendapg lkkshsspsl nqespvsakv krnvserkdy
     1021 rpetpsikqk vt
//
LOCUS       XP_041327221            1024 aa            linear   VRT 06-MAY-2021
DEFINITION  PH and SEC7 domain-containing protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327221
VERSION     XP_041327221.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471287.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1024
                     /product="PH and SEC7 domain-containing protein 3 isoform
                     X2"
                     /calculated_mol_wt=113412
     Region          559..721
                     /region_name="Sec7"
                     /note="Sec7 domain; Domain named after the S. cerevisiae
                     SEC7 gene product. The Sec7 domain is the central domain
                     of the guanine-nucleotide-exchange factors (GEFs) of the
                     ADP-ribosylation factor family of small GTPases (ARFs) .
                     It carries the exchange factor...; cd00171"
                     /db_xref="CDD:238100"
     Site            order(629..636,665..678)
                     /site_type="active"
                     /note="active site/putative ARF binding site [active]"
                     /db_xref="CDD:238100"
     Region          766..891
                     /region_name="PH_EFA6"
                     /note="Exchange Factor for ARF6 Pleckstrin homology (PH)
                     domain; cd13295"
                     /db_xref="CDD:270107"
     CDS             1..1024
                     /gene="PSD3"
                     /coded_by="XM_041471287.1:55..3129"
                     /db_xref="GeneID:121355653"
ORIGIN      
        1 megaggaaet lvrdndisah aqnvakakye flfgleeekp sgmgsgrgss slpphtiine
       61 fpeygtvess rqapsalstc qaepvthspe rrdshhrvrp ipqcaapahn lrpdagavql
      121 htpeeglqpa gnlpeimkis rqleaakvqe rantsldset qmekkcvtgs qnvqaarepv
      181 ptgqeklsdm llpsertaee kkylivekdl asvragekqs essqavsnka eevhtaqeps
      241 chkssvtnle avsrvergtr feefsehnqg kmqtgterrl akeaavskhv efqgveilwl
      301 ekaeeqkrrk hslldsvsve rkafaktssh svspmvspal lslpdsawne vcedprlepa
      361 asgatplpll eesrmdevsv kdrkncgeee mtvlargqgr mveegeaatg gyedflgqrh
      421 sdvstdlyss qfenildnas lyysaeslet lysepdsyfs fempltpmiq qrmkeggqfl
      481 drtsavgqtd vpdrevkgcg egianglrdv setlfkgdit evprlesnvg lqnvvldssa
      541 amgsselqek datgalghdl snggssnlea arrlakrlyh ldrfkrsdva khlgknnefs
      601 klvaeeylkf fdftgmtldc slrsffkafs ligetqerer vlihfssryy qcnpnaissq
      661 dgvhcltcam mllntdlhgh nigkkmtcqe fianlqgmnd gkdfprgllk alynsiknek
      721 lewavdeeek kkshsdgade kdngnqtkav srignsnnpf ldiphdsnaa vyktgflark
      781 ihadmdgkkt prgkrgwktf yavlkgtvly lqkdeykpek alseedlkna vsvhhalask
      841 atdyekkpnv lklktadwrv llfqaqsqee mqtwinkinc vaavfsappf paaigsqkkf
      901 srpllpattt klsqdeqlks heaklkqist elaehrsypp dkklkgkevd dyklkdhyle
      961 feknryeiyv gllkegvkel lsggendapg lkkshsspsl nqespvsakv sqdalpysas
     1021 ciwy
//
LOCUS       XP_041327235             366 aa            linear   VRT 06-MAY-2021
DEFINITION  sialic acid synthase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041327235
VERSION     XP_041327235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="sialic acid synthase isoform X1"
                     /calculated_mol_wt=41188
     Region          17..286
                     /region_name="SpsE"
                     /note="Sialic acid synthase SpsE, contains C-terminal SAF
                     domain [Cell wall/membrane/envelope biogenesis]; COG2089"
                     /db_xref="CDD:441692"
     CDS             1..366
                     /gene="NANS"
                     /coded_by="XM_041471301.1:59..1159"
                     /db_xref="GeneID:121355663"
ORIGIN      
        1 marefelcpg rrvggdqpcf iiaeigqnhq gdldiakrmi rmvkdcgadc akfqkseley
       61 kfnkkalerp ytskhswgkt ygehkrhlef shdqyrelkk yaeeigifft asgmdemave
      121 flheldvpff kvgsgdtnnf pylektakkg rpmvissgmq smntmhqvyq ivkpinpnfc
      181 flqctsaypl qpedvnlrvi sayqsafpdi pigysghetg iaisvaavam gakvlerhvt
      241 ldktwkgsdh qaslepnela elvkairtve kamgspikql lpcemacnek akhpqlpqpl
      301 lgglvlrtfh qlrgpsldsl qhfnvllvvr gpeldmgfkv wphqcqvlgn tnrnnismvl
      361 yelllh
//
LOCUS       XP_041327242             359 aa            linear   VRT 06-MAY-2021
DEFINITION  sialic acid synthase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041327242
VERSION     XP_041327242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471308.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..359
                     /product="sialic acid synthase isoform X2"
                     /calculated_mol_wt=40073
     Region          17..346
                     /region_name="SpsE"
                     /note="Sialic acid synthase SpsE, contains C-terminal SAF
                     domain [Cell wall/membrane/envelope biogenesis]; COG2089"
                     /db_xref="CDD:441692"
     CDS             1..359
                     /gene="NANS"
                     /coded_by="XM_041471308.1:40..1119"
                     /db_xref="GeneID:121355663"
ORIGIN      
        1 marefelcpg rrvggdqpcf iiaeigqnhq gdldiakrmi rmvkdcgadc akfqkseley
       61 kfnkkalerp ytskhswgkt ygehkrhlef shdqyrelkk yaeeigifft asgmdemave
      121 flheldvpff kvgsgdtnnf pylektakkg rpmvissgmq smntmhqvyq ivkpinpnfc
      181 flqctsaypl qpedvnlrvi sayqsafpdi pigysghetg iaisvaavam gakvlerhvt
      241 ldktwkgsdh qaslepnela elvkairtve kamgspikql lpcemacnek lgksvvakva
      301 ipegailtld mltvkvgepk gfppecifdl vgqkvkknie edetiteqvv enhvkkvkc
//
LOCUS       XP_041327254             367 aa            linear   VRT 06-MAY-2021
DEFINITION  protein farnesyltransferase/geranylgeranyltransferase type-1
            subunit alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041327254
VERSION     XP_041327254.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471320.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..367
                     /product="protein
                     farnesyltransferase/geranylgeranyltransferase type-1
                     subunit alpha"
                     /calculated_mol_wt=42813
     Region          49..343
                     /region_name="PLN02789"
                     /note="farnesyltranstransferase"
                     /db_xref="CDD:215423"
     CDS             1..367
                     /gene="FNTA"
                     /coded_by="XM_041471320.1:36..1139"
                     /db_xref="GeneID:121355676"
ORIGIN      
        1 maadgraaaa avveelppeg dveggssepe ggfgqlleee edgedagyvl yrdrkewadi
       61 epvpqndgpn pvvqiiysek frdvydyfra vlqrderser afkltadaie lnaanytvwh
      121 frrvllqslg kdlheelkyi taiiedqpkn yqvwhhrrvl vewlqdpsqe lefiadilnq
      181 daknyhawqh rqwviqefkl wdneldyvdq llredvrnns vwnqrhfvif nttgyddpav
      241 ldrevrytle mitavphnes awnylkgilq drglskypnl leellnlqps hsspyliafl
      301 vdiyedmlen qcdnkeetln kalelceila kekdtirkey wryigrslks khssgteqss
      361 tmtdkeq
//
LOCUS       XP_041327262             475 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-(1,3)-fucosyltransferase 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041327262
VERSION     XP_041327262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471328.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="alpha-(1,3)-fucosyltransferase 10"
                     /calculated_mol_wt=55730
     Region          80..174
                     /region_name="Glyco_tran_10_N"
                     /note="Fucosyltransferase, N-terminal; pfam17039"
                     /db_xref="CDD:465336"
     Region          203..>351
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..475
                     /gene="FUT10"
                     /coded_by="XM_041471328.1:370..1797"
                     /db_xref="GeneID:121355686"
ORIGIN      
        1 mmrmrrkilw ascfcfaaaf flvltlqvit elgnsenkvs iisslhsspl kpgerqafqf
       61 kkqelhssfk tesdvnhypv llwwspltge tgrfsqcged vcffttnkty qhnqmtrafl
      121 fygtdfsids lplprkeyhd walfheespk nnyklfheaa itlfnhtatf srhshlpltt
      181 qylegvevlk slrfmiplqm knslrkrlap lvyvqsdcnp psdrdsyvre lmchievdsy
      241 geclhnrdlp qhlrnpaamd dgnflkilaq ykfilafena icddyitekl wrplklgvvp
      301 vyfgspsivd wlpsnksail vssfshprdl ahyiktldtn deeyesylqw klkgdisnpr
      361 llrtmkerkw gvqditqdny idtfecmvcn rvwenirrke kgwlpqkwea qvshlscpkp
      421 qafwfsssnp gwislqkmwi psfeqskkea walrhlvern knftaeefwm lvfke
//
LOCUS       XP_041327270             475 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-(1,3)-fucosyltransferase 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041327270
VERSION     XP_041327270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="alpha-(1,3)-fucosyltransferase 10"
                     /calculated_mol_wt=55730
     Region          80..174
                     /region_name="Glyco_tran_10_N"
                     /note="Fucosyltransferase, N-terminal; pfam17039"
                     /db_xref="CDD:465336"
     Region          203..>351
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..475
                     /gene="FUT10"
                     /coded_by="XM_041471336.1:373..1800"
                     /db_xref="GeneID:121355686"
ORIGIN      
        1 mmrmrrkilw ascfcfaaaf flvltlqvit elgnsenkvs iisslhsspl kpgerqafqf
       61 kkqelhssfk tesdvnhypv llwwspltge tgrfsqcged vcffttnkty qhnqmtrafl
      121 fygtdfsids lplprkeyhd walfheespk nnyklfheaa itlfnhtatf srhshlpltt
      181 qylegvevlk slrfmiplqm knslrkrlap lvyvqsdcnp psdrdsyvre lmchievdsy
      241 geclhnrdlp qhlrnpaamd dgnflkilaq ykfilafena icddyitekl wrplklgvvp
      301 vyfgspsivd wlpsnksail vssfshprdl ahyiktldtn deeyesylqw klkgdisnpr
      361 llrtmkerkw gvqditqdny idtfecmvcn rvwenirrke kgwlpqkwea qvshlscpkp
      421 qafwfsssnp gwislqkmwi psfeqskkea walrhlvern knftaeefwm lvfke
//
LOCUS       XP_041327279             475 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-(1,3)-fucosyltransferase 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041327279
VERSION     XP_041327279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="alpha-(1,3)-fucosyltransferase 10"
                     /calculated_mol_wt=55730
     Region          80..174
                     /region_name="Glyco_tran_10_N"
                     /note="Fucosyltransferase, N-terminal; pfam17039"
                     /db_xref="CDD:465336"
     Region          203..>351
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..475
                     /gene="FUT10"
                     /coded_by="XM_041471345.1:258..1685"
                     /db_xref="GeneID:121355686"
ORIGIN      
        1 mmrmrrkilw ascfcfaaaf flvltlqvit elgnsenkvs iisslhsspl kpgerqafqf
       61 kkqelhssfk tesdvnhypv llwwspltge tgrfsqcged vcffttnkty qhnqmtrafl
      121 fygtdfsids lplprkeyhd walfheespk nnyklfheaa itlfnhtatf srhshlpltt
      181 qylegvevlk slrfmiplqm knslrkrlap lvyvqsdcnp psdrdsyvre lmchievdsy
      241 geclhnrdlp qhlrnpaamd dgnflkilaq ykfilafena icddyitekl wrplklgvvp
      301 vyfgspsivd wlpsnksail vssfshprdl ahyiktldtn deeyesylqw klkgdisnpr
      361 llrtmkerkw gvqditqdny idtfecmvcn rvwenirrke kgwlpqkwea qvshlscpkp
      421 qafwfsssnp gwislqkmwi psfeqskkea walrhlvern knftaeefwm lvfke
//
LOCUS       XP_041327292             248 aa            linear   VRT 06-MAY-2021
DEFINITION  THAP domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041327292
VERSION     XP_041327292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="THAP domain-containing protein 1"
                     /calculated_mol_wt=28399
     Region          4..81
                     /region_name="THAP"
                     /note="The THAP domain is a putative DNA-binding domain
                     (DBD) and probably also binds a zinc ion; smart00980"
                     /db_xref="CDD:214951"
     CDS             1..248
                     /gene="THAP1"
                     /coded_by="XM_041471358.1:230..976"
                     /db_xref="GeneID:121355705"
ORIGIN      
        1 mvqscsayrc rnrydkekpi sfhkfpltrp dlckkweaav krknfkptky ssicsehftp
       61 dcfkrecnnk llkenavpti fcytepgeks eefaeqpedp lpppplpplp pppppppppp
      121 pppaapvlpq spstpsfhls qidarfvdps igllmpplqt psnlavfcdh nytvedtvhq
      181 rkriqqleeq veklrkklkt aqqrcrrqer qieklreivq fqkekdilag kgyvilpndy
      241 fevvevpa
//
LOCUS       XP_041327303             228 aa            linear   VRT 06-MAY-2021
DEFINITION  clathrin light chain A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041327303
VERSION     XP_041327303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="clathrin light chain A isoform X1"
                     /calculated_mol_wt=25320
     Region          1..228
                     /region_name="Clathrin_lg_ch"
                     /note="Clathrin light chain; pfam01086"
                     /db_xref="CDD:460056"
     CDS             1..228
                     /gene="CLTA"
                     /coded_by="XM_041471369.1:49..735"
                     /db_xref="GeneID:121355711"
ORIGIN      
        1 madmeffgaq qpqqppagng mpdggeedpa aaflaqqene iagiendegy gilengevpe
       61 alqdpeglgm davagvvngd vyqesngptd cyaaisqvdr lqsepesirk wreeqkerle
      121 qldansrkqe aewkekaike leewyarqde klektkasns tninhpcysl eqaaeeafvn
      181 daeevfpgte wervaqlcdf npksskqakd vsrmrsvlis lkqaplvr
//
LOCUS       XP_041327311             227 aa            linear   VRT 06-MAY-2021
DEFINITION  clathrin light chain A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041327311
VERSION     XP_041327311.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471377.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..227
                     /product="clathrin light chain A isoform X2"
                     /calculated_mol_wt=25191
     Region          1..227
                     /region_name="Clathrin_lg_ch"
                     /note="Clathrin light chain; pfam01086"
                     /db_xref="CDD:460056"
     CDS             1..227
                     /gene="CLTA"
                     /coded_by="XM_041471377.1:49..732"
                     /db_xref="GeneID:121355711"
ORIGIN      
        1 madmeffgaq qpqqppagng mpdggeedpa aaflaqqene iagiendegy gilengevpe
       61 alqdpeglgm davagvvngd vyqsngptdc yaaisqvdrl qsepesirkw reeqkerleq
      121 ldansrkqea ewkekaikel eewyarqdek lektkasnst ninhpcysle qaaeeafvnd
      181 aeevfpgtew ervaqlcdfn pksskqakdv srmrsvlisl kqaplvr
//
LOCUS       XP_041327321             216 aa            linear   VRT 06-MAY-2021
DEFINITION  clathrin light chain A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327321
VERSION     XP_041327321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471387.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="clathrin light chain A isoform X3"
                     /calculated_mol_wt=23988
     Region          1..216
                     /region_name="Clathrin_lg_ch"
                     /note="Clathrin light chain; pfam01086"
                     /db_xref="CDD:460056"
     CDS             1..216
                     /gene="CLTA"
                     /coded_by="XM_041471387.1:49..699"
                     /db_xref="GeneID:121355711"
ORIGIN      
        1 madmeffgaq qpqqppagng mpdggeedpa aaflaqqene iagiendegy gilengevpe
       61 alqdpeglgm davagvvngd vyqesngptd cyaaisqvdr lqsepesirk wreeqkerle
      121 qldansrkqe aewkekaike leewyarqde klektkasnr aaeeafvnda eevfpgtewe
      181 rvaqlcdfnp ksskqakdvs rmrsvlislk qaplvr
//
LOCUS       XP_041327329             246 aa            linear   VRT 06-MAY-2021
DEFINITION  clathrin light chain A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041327329
VERSION     XP_041327329.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471395.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="clathrin light chain A isoform X4"
                     /calculated_mol_wt=27403
     Region          1..246
                     /region_name="Clathrin_lg_ch"
                     /note="Clathrin light chain; pfam01086"
                     /db_xref="CDD:460056"
     CDS             1..246
                     /gene="CLTA"
                     /coded_by="XM_041471395.1:49..789"
                     /db_xref="GeneID:121355711"
ORIGIN      
        1 madmeffgaq qpqqppagng mpdggeedpa aaflaqqene iagiendegy gilengevpe
       61 alqdpeglgm davagvvngd vyqesngptd cyaaisqvdr lqsepesirk wreeqkerle
      121 qldansrkqe aewkekaike leewyarqde klektkasnr vadeafykqp fadvigyvtn
      181 inhpcysleq aaeeafvnda eevfpgtewe rvaqlcdfnp ksskqakdvs rmrsvlislk
      241 qaplvr
//
LOCUS       XP_041327341             722 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional UDP-N-acetylglucosamine
            2-epimerase/N-acetylmannosamine kinase [Pyrgilauda ruficollis].
ACCESSION   XP_041327341
VERSION     XP_041327341.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471407.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..722
                     /product="bifunctional UDP-N-acetylglucosamine
                     2-epimerase/N-acetylmannosamine kinase"
                     /calculated_mol_wt=78876
     Region          11..374
                     /region_name="NeuC_NnaA"
                     /note="UDP-N-acetyl-D-glucosamine 2-epimerase,
                     UDP-hydrolysing; TIGR03568"
                     /db_xref="CDD:274654"
     Region          408..712
                     /region_name="ASKHA_NBD_ROK_GNE"
                     /note="nucleotide-binding domain (NBD) of bifunctional
                     UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine
                     kinase (GNE) and similar proteins; cd24060"
                     /db_xref="CDD:466910"
     CDS             1..722
                     /gene="GNE"
                     /coded_by="XM_041471407.1:101..2269"
                     /db_xref="GeneID:121355735"
ORIGIN      
        1 mekngnnhkl rvcvatcnra dysklapimf gikaepqffe ldvvvlgshl iddygntyrm
       61 ieqddfdiht rlhtivrged eaamvesvgl alvklpdvln rlkpdimivh gdrfdalala
      121 tsaalmniri lhieggevsg tiddsirhai tklahyhvcc trsaeqhlia mcedhdrill
      181 agcpsydkll saknkdymsi ismwlgedvk trdyivalqh pvttdikhsi kmfeltldal
      241 isfnkrtlvl fpnvdagske mvrvmrkkgi ehhpnfravk hvpfdqfiql vahagcmign
      301 sscgvrevga fgtpvinlgt rqtgretgen vlhvrdadtq dkilhalqlq fgkqypcski
      361 ygdgnavpri lkflksidlk eplqkkfcfp pvkdnisqdi dhiletqsal avdlggtnlr
      421 vaivsmkgei vkkytqlnpk tyedrlalil kmcveaasea vnvncrilgv gistggrvnp
      481 regivlhstk liqewssvdl rtpisdalhl pvwvdndgnc aalaerkfgh gkgienfvtl
      541 itgtgigggi vhqhelihgs sfcaaelghi vvsldgpecl cgsqgcieay asgialqrea
      601 kklhdddlll vegmsmkeee ivsaahliqa aklgntkaes ilrtagtalg lgvvnilhtv
      661 npslvilsgv lanhyvnavk dvinrqalss vktvdvvvsn ladpallgaa slvldyttrr
      721 iy
//
LOCUS       XP_041327354              71 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP synthase subunit e, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041327354
VERSION     XP_041327354.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471420.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..71
                     /product="ATP synthase subunit e, mitochondrial"
                     /calculated_mol_wt=8208
     Region          3..>35
                     /region_name="ATP-synt_E"
                     /note="ATP synthase E chain; pfam05680"
                     /db_xref="CDD:368558"
     CDS             1..71
                     /gene="ATP5ME"
                     /coded_by="XM_041471420.1:128..343"
                     /db_xref="GeneID:121355743"
ORIGIN      
        1 mippvqvspl ikftrysall vgmiygkkry dylkpiaeee rrieaeekkk reeleriake
       61 laeasedsil k
//
LOCUS       XP_041327366             199 aa            linear   VRT 06-MAY-2021
DEFINITION  protein NipSnap homolog 3A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041327366
VERSION     XP_041327366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..199
                     /product="protein NipSnap homolog 3A-like"
                     /calculated_mol_wt=22716
     Region          1..87
                     /region_name="NIPSNAP"
                     /note="pfam07978"
                     /db_xref="CDD:429767"
     Region          98..197
                     /region_name="NIPSNAP"
                     /note="pfam07978"
                     /db_xref="CDD:429767"
     CDS             1..199
                     /gene="LOC121355751"
                     /coded_by="XM_041471432.1:78..677"
                     /db_xref="GeneID:121355751"
ORIGIN      
        1 mkeflemvsk yfhfrtahse lvgfwyselg amnkvlhiwk ydnfahrtav rhalandkdw
       61 qgkfisaalp lvekqhneva ylvpwcqlgk pskeggvyew vtfqmkpggp alwgeafraa
      121 inahintgyt kligvfhtey gllntvhvlw wnespddraa grhrahedar vvaavrdsvr
      181 flesqqnmll iplqcsplk
//
LOCUS       XP_041327388             508 aa            linear   VRT 06-MAY-2021
DEFINITION  metalloprotease TIKI1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041327388
VERSION     XP_041327388.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471454.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="metalloprotease TIKI1 isoform X1"
                     /calculated_mol_wt=58703
     Region          46..352
                     /region_name="Tiki"
                     /note="Tiki homology domain antagonizes Wnt function via
                     cleavage of amino-terminal residues; cd14789"
                     /db_xref="CDD:350614"
     CDS             1..508
                     /gene="TRABD2A"
                     /coded_by="XM_041471454.1:84..1610"
                     /db_xref="GeneID:121355762"
ORIGIN      
        1 mvrpgglcrl lllllqgsll llatarhgra aacplrrkqn elnsflwtik rdppsyffgt
       61 ihvpytrvwd fipenskkaf qqshivyfel dltdpytisa ltscqllpqg knlqdvlpqd
      121 iyrrlkrhle yvklmmpswm tpdqrgkgly adylfnaiag nweqkrpvwv mlmvnsltev
      181 diksrgvpvl dlflaqeaer lrkqtgavek veeqchplng lnfsqvvfal nqtllqqesl
      241 ragsfqipyt tedlikhync gdlssiifnh dtsqvpnfin atlpaherit aqeidsyfrq
      301 eliykrnerm grrvkdllee hpdksfffaf gaghfmgnnt vidvlrregy evehtpagqa
      361 innrkspktl lafssshspy vmshelpvhp qkeeeeeeee eeflphllfp dsidvlmkvd
      421 rkykkkkkkq qkkqklrqfn dlwvrleesa tdpppririi ngyitvepqp rghgrsshtr
      481 adtssahqis hslflplltl tlrkimlh
//
LOCUS       XP_041327397             488 aa            linear   VRT 06-MAY-2021
DEFINITION  metalloprotease TIKI1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041327397
VERSION     XP_041327397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471463.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..488
                     /product="metalloprotease TIKI1 isoform X2"
                     /calculated_mol_wt=56620
     Region          26..332
                     /region_name="Tiki"
                     /note="Tiki homology domain antagonizes Wnt function via
                     cleavage of amino-terminal residues; cd14789"
                     /db_xref="CDD:350614"
     CDS             1..488
                     /gene="TRABD2A"
                     /coded_by="XM_041471463.1:227..1693"
                     /db_xref="GeneID:121355762"
ORIGIN      
        1 mhtcctgevp kpqqahcrqn elnsflwtik rdppsyffgt ihvpytrvwd fipenskkaf
       61 qqshivyfel dltdpytisa ltscqllpqg knlqdvlpqd iyrrlkrhle yvklmmpswm
      121 tpdqrgkgly adylfnaiag nweqkrpvwv mlmvnsltev diksrgvpvl dlflaqeaer
      181 lrkqtgavek veeqchplng lnfsqvvfal nqtllqqesl ragsfqipyt tedlikhync
      241 gdlssiifnh dtsqvpnfin atlpaherit aqeidsyfrq eliykrnerm grrvkdllee
      301 hpdksfffaf gaghfmgnnt vidvlrregy evehtpagqa innrkspktl lafssshspy
      361 vmshelpvhp qkeeeeeeee eeflphllfp dsidvlmkvd rkykkkkkkq qkkqklrqfn
      421 dlwvrleesa tdpppririi ngyitvepqp rghgrsshtr adtssahqis hslflplltl
      481 tlrkimlh
//
LOCUS       XP_041327406             459 aa            linear   VRT 06-MAY-2021
DEFINITION  metalloprotease TIKI1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327406
VERSION     XP_041327406.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471472.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..459
                     /product="metalloprotease TIKI1 isoform X3"
                     /calculated_mol_wt=53163
     Region          46..303
                     /region_name="Tiki"
                     /note="Tiki homology domain antagonizes Wnt function via
                     cleavage of amino-terminal residues; cd14789"
                     /db_xref="CDD:350614"
     CDS             1..459
                     /gene="TRABD2A"
                     /coded_by="XM_041471472.1:84..1463"
                     /db_xref="GeneID:121355762"
ORIGIN      
        1 mvrpgglcrl lllllqgsll llatarhgra aacplrrkqn elnsflwtik rdppsyffgt
       61 ihvpytrvwd fipenskkaf qqshivyfel dltdpytisa ltscqllpqg knlqdvlpqd
      121 iyrrlkrhle yvklmmpswm tpdqrgkgly adylfnaiag nweqkrpvwv mlmvnsltev
      181 diksrgvpvl dlflaqeaer lrkqtgavek veeqchplng lnfsqvpnfi natlpaheri
      241 taqeidsyfr qeliykrner mgrrvkdlle ehpdksfffa fgaghfmgnn tvidvlrreg
      301 yevehtpagq ainnrkspkt llafssshsp yvmshelpvh pqkeeeeeee eeeflphllf
      361 pdsidvlmkv drkykkkkkk qqkkqklrqf ndlwvrlees atdpppriri ingyitvepq
      421 prghgrssht radtssahqi shslflpllt ltlrkimlh
//
LOCUS       XP_041327435             313 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein DKFZp434B061-like [Pyrgilauda ruficollis].
ACCESSION   XP_041327435
VERSION     XP_041327435.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471501.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="uncharacterized protein DKFZp434B061-like"
                     /calculated_mol_wt=33136
     Region          <227..>311
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     CDS             1..313
                     /gene="LOC121355791"
                     /coded_by="XM_041471501.1:103..1044"
                     /db_xref="GeneID:121355791"
ORIGIN      
        1 mltaailshs lpsailfysl msailsysls sailshplta ailshsllsa ilpsmlmaai
       61 lfyslmsail shslpsails cpltaailsr slpsailshs lpsailscpl taailsrsls
      121 sailshslss ailpsllmaa ilshslmsai lshslpsail shslmsails hslpsailsr
      181 slqsailshs lpsailshsp psailplplt sptpprplta ailsggqeee allsemdvtg
      241 qafedmqeqn lrllqqlrek ddanfklmse rikanqihkl lreekdelae qvlalkaqve
      301 aqlqveqelr ktn
//
LOCUS       XP_041327447             284 aa            linear   VRT 06-MAY-2021
DEFINITION  probable serine/threonine-protein kinase samkC isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041327447
VERSION     XP_041327447.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471513.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="probable serine/threonine-protein kinase samkC
                     isoform X1"
                     /calculated_mol_wt=31367
     CDS             1..284
                     /gene="LOC121355800"
                     /coded_by="XM_041471513.1:401..1255"
                     /db_xref="GeneID:121355800"
ORIGIN      
        1 mvssrsrppq wsaqltvnqi ktnptvisin gqqdqdqhpw saqvkaeprr vkvnqpmvkl
       61 ktkprwsaqs rpspnppktn ptppqcppks gptndqphla ngqpkpwstq dqpsqwsvrg
      121 qgqprgqsla kpsqgqlnqr sakatpsqgd teptvkprst ngqaksdqws iqdqplvkpg
      181 qtnsqakanq wpvrsritqs sthdqptvtk vkmnqpvvdt npshsrqrpk spkgqpntnq
      241 wsavnqwssl tkqwsvrsis tkqrsvrsis tnqgsvrsmp tnqs
//
LOCUS       XP_041327457             284 aa            linear   VRT 06-MAY-2021
DEFINITION  probable serine/threonine-protein kinase samkC isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041327457
VERSION     XP_041327457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="probable serine/threonine-protein kinase samkC
                     isoform X2"
                     /calculated_mol_wt=31367
     CDS             1..284
                     /gene="LOC121355800"
                     /coded_by="XM_041471523.1:401..1255"
                     /db_xref="GeneID:121355800"
ORIGIN      
        1 mvssrsrppq wsaqltvnqi ktnptvisin gqqdqdqhpw saqvkaeprr vkvnqpmvkl
       61 ktkprwsaqs rpspnppktn ptppqcppks gptndqphla ngqpkpwstq dqpsqwsvrg
      121 qgqprgqsla kpsqgqlnqr sakatpsqgd teptvkprst ngqaksdqws iqdqplvkpg
      181 qtnsqakanq wpvrsritqs sthdqptvtk vkmnqpvvdt npshsrqrpk spkgqpntnq
      241 wsavnqwssl tkqwsvrsis tkqrsvrsis tnqgsvrsmp tnqs
//
LOCUS       XP_041327472             251 aa            linear   VRT 06-MAY-2021
DEFINITION  protein fosB [Pyrgilauda ruficollis].
ACCESSION   XP_041327472
VERSION     XP_041327472.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471538.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508833.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..251
                     /product="protein fosB"
                     /calculated_mol_wt=26546
     Region          153..206
                     /region_name="bZIP_Fos"
                     /note="Basic leucine zipper (bZIP) domain of the oncogene
                     Fos (Fos): a DNA-binding and dimerization domain; cd14721"
                     /db_xref="CDD:269869"
     Region          153..205
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269869"
     Site            order(164,167..168,171..172,174..175,178..179,181..182,
                     185..186,188..189,192..193,195..196,199..200,202..203)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269869"
     CDS             1..251
                     /gene="FOSB"
                     /coded_by="XM_041471538.1:613..1368"
                     /db_xref="GeneID:121355809"
ORIGIN      
        1 mfqgfpgdyd sgsrcsssps aesqylspld sfgspgaaag aaqecgglgd mpgsfvptvt
       61 aittsqdlqw lvqptlissv apgapmaqpp ppaldpydlp gpsystppam gggfagppaa
      121 tpgraprarp rrgreetltp eeeekrrvrr ernklaaakc rnrrreltdr lqaetdqlee
      181 ekaeleseia elrkekerle fvlvahapac kvpfddiata ataatalpae reprveprts
      241 gaaaatsprt p
//
LOCUS       XP_041327487             125 aa            linear   VRT 06-MAY-2021
DEFINITION  3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041327487
VERSION     XP_041327487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471553.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508842.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>125
                     /product="3-beta-hydroxysteroid-Delta(8),
                     Delta(7)-isomerase"
     CDS             1..125
                     /gene="LOC121355810"
                     /coded_by="XM_041471553.1:39..>414"
                     /db_xref="GeneID:121355810"
ORIGIN      
        1 metsahpywp ralalpgyva garpgwqcag avaaaaaall algwalggag ggtkggakgv
       61 akrsparrlv lgwfllcagi hgvlegyfsl rhrelpadtg lladvcehpr ggwvpwgalg
      121 rgpkg
//
LOCUS       XP_041327499             528 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: prickle planar cell polarity protein 3-like,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041327499
VERSION     XP_041327499.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471565.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508844.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 46% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>528
                     /product="LOW QUALITY PROTEIN: prickle planar cell
                     polarity protein 3-like"
     Region          160..215
                     /region_name="PET"
                     /note="PET ((Prickle Espinas Testin) domain is involved in
                     protein-protein interactions; cl05674"
                     /db_xref="CDD:471291"
     Region          321..373
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(322,325,343,346,349,352,370,373)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     CDS             1..528
                     /gene="LOC121355820"
                     /coded_by="XM_041471565.1:<1..>1586"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121355820"
ORIGIN      
        1 dpergrpcra crelcpgfqe hpwrxagcap rkicqhckcp rgehvgggvp palqgvlarl
       61 lpeshpppgs edsgcsaeef awappglspd qvtppgpqnp rdgdpspiyf evphdrnlgk
      121 icqhckcprg ehvgggvppa lqgvlarllp eshpppgsed sgcsaeefaw appglspdqp
      181 qfchdldeve rrefklfaqr rkrenlgqgs vrplpltsvg avcqqvgapq krdpkngtpk
      241 tgtlkwdpkn gdpkngtpqk kscgtqewgw eaprcpltpv vrvgsynrgd ctpnsrgalv
      301 taraegwllc grhhgdsvrh rcpgcdelif ggrwaeaggr rwhlrhlrcl ecegpleprd
      361 lpgegaqplc ppcrarrahl cdtcgdpige grgpgglgvs ggppdlcpvt fdprsaalik
      421 grcprcvpav pgvpvtcggg gvpgaailng tprkqrgana ppnmaapvra arsdwlsasa
      481 cpaadwltpr pepeeeiiae dyddahvdye asrleglvpp wykvidpt
//
LOCUS       XP_041327520             492 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041327520
VERSION     XP_041327520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="CUGBP Elav-like family member 4 isoform X1"
                     /calculated_mol_wt=52946
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          318..>482
                     /region_name="half-pint"
                     /note="poly-U binding splicing factor, half-pint family;
                     TIGR01645"
                     /db_xref="CDD:130706"
     Region          403..481
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..492
                     /gene="CELF4"
                     /coded_by="XM_041471586.1:1..1479"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyaaaypa aygqisqafp qpppmipqqq regpegcnlf iyhlpqefgd
      421 aelmqmflpf gnvisskvfv dratnqskcf gfvsfdnpas aqaaiqamng fqigmkrlkv
      481 qlkrpkdanr py
//
LOCUS       XP_041327528             494 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041327528
VERSION     XP_041327528.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471594.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="CUGBP Elav-like family member 4 isoform X2"
                     /calculated_mol_wt=53100
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          405..483
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..494
                     /gene="CELF4"
                     /coded_by="XM_041471594.1:1..1485"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyagpaay paaygqisqa fpqpppmipq qqregpegcn lfiyhlpqef
      421 gdaelmqmfl pfgnvisskv fvdratnqsk cfgfvsfdnp asaqaaiqam ngfqigmkrl
      481 kvqlkrpkda nrpy
//
LOCUS       XP_041327536             472 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041327536
VERSION     XP_041327536.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471602.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="CUGBP Elav-like family member 4 isoform X3"
                     /calculated_mol_wt=50763
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          401..471
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..472
                     /gene="CELF4"
                     /coded_by="XM_041471602.1:1..1419"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyaaaypa aygqisqafp qpppmipqqq regpegcnlf iyhlpqefgd
      421 aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr py
//
LOCUS       XP_041327544             491 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041327544
VERSION     XP_041327544.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471610.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="CUGBP Elav-like family member 4 isoform X4"
                     /calculated_mol_wt=52899
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          402..480
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..491
                     /gene="CELF4"
                     /coded_by="XM_041471610.1:1..1476"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqhysaypaa ygqisqafpq pppmipqqqr egpegcnlfi yhlpqefgda
      421 elmqmflpfg nvisskvfvd ratnqskcfg fvsfdnpasa qaaiqamngf qigmkrlkvq
      481 lkrpkdanrp y
//
LOCUS       XP_041327548             502 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041327548
VERSION     XP_041327548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="CUGBP Elav-like family member 4 isoform X5"
                     /calculated_mol_wt=53995
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          413..491
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..502
                     /gene="CELF4"
                     /coded_by="XM_041471614.1:1..1509"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regpegcnlf
      421 iyhlpqefgd aelmqmflpf gnvisskvfv dratnqskcf gfvsfdnpas aqaaiqamng
      481 fqigmkrlkv qlkrpkdanr py
//
LOCUS       XP_041327556             493 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041327556
VERSION     XP_041327556.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471622.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="CUGBP Elav-like family member 4 isoform X6"
                     /calculated_mol_wt=52971
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          404..482
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..493
                     /gene="CELF4"
                     /coded_by="XM_041471622.1:1..1482"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregpegcnl fiyhlpqefg
      421 daelmqmflp fgnvisskvf vdratnqskc fgfvsfdnpa saqaaiqamn gfqigmkrlk
      481 vqlkrpkdan rpy
//
LOCUS       XP_041327568             473 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041327568
VERSION     XP_041327568.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471634.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="CUGBP Elav-like family member 4 isoform X7"
                     /calculated_mol_wt=50846
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          402..472
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..473
                     /gene="CELF4"
                     /coded_by="XM_041471634.1:1..1422"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyagpayp aaygqisqaf pqpppmipqq qregpegcnl fiyhlpqefg
      421 daelmqmflp fgfvsfdnpa saqaaiqamn gfqigmkrlk vqlkrpkdan rpy
//
LOCUS       XP_041327579             491 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041327579
VERSION     XP_041327579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="CUGBP Elav-like family member 4 isoform X8"
                     /calculated_mol_wt=52828
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Region          <50..383
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          402..480
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..491
                     /gene="CELF4"
                     /coded_by="XM_041471645.1:1..1476"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm nglaaapmtp
      301 tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp ypaqsptaad
      361 plqqayagvq qyagpaypaa ygqisqafpq pppmipqqqr egpegcnlfi yhlpqefgda
      421 elmqmflpfg nvisskvfvd ratnqskcfg fvsfdnpasa qaaiqamngf qigmkrlkvq
      481 lkrpkdanrp y
//
LOCUS       XP_041327590             471 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041327590
VERSION     XP_041327590.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471656.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="CUGBP Elav-like family member 4 isoform X9"
                     /calculated_mol_wt=50634
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          400..470
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..471
                     /gene="CELF4"
                     /coded_by="XM_041471656.1:1..1416"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyaaaypaa ygqisqafpq pppmipqqqr egpegcnlfi yhlpqefgda
      421 elmqmflpfg fvsfdnpasa qaaiqamngf qigmkrlkvq lkrpkdanrp y
//
LOCUS       XP_041327600             482 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327600
VERSION     XP_041327600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="CUGBP Elav-like family member 4 isoform X10"
                     /calculated_mol_wt=51835
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          <54..376
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          411..481
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..482
                     /gene="CELF4"
                     /coded_by="XM_041471666.1:1..1449"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal
      301 nmnglaaapm tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi
      361 hpypaqspta adplqqayag vqqyaaaypa aygqisqafp qpppmipqqq regpegcnlf
      421 iyhlpqefgd aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr
      481 py
//
LOCUS       XP_041327608             481 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327608
VERSION     XP_041327608.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471674.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="CUGBP Elav-like family member 4 isoform X11"
                     /calculated_mol_wt=51729
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          410..480
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..481
                     /gene="CELF4"
                     /coded_by="XM_041471674.1:1..1446"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyaaaypaa ygqisqafpq pppmipqqqr egpegcnlfi
      421 yhlpqefgda elmqmflpfg fvsfdnpasa qaaiqamngf qigmkrlkvq lkrpkdanrp
      481 y
//
LOCUS       XP_041327617             472 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X12 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327617
VERSION     XP_041327617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471683.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="CUGBP Elav-like family member 4 isoform X12"
                     /calculated_mol_wt=50775
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          401..471
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..472
                     /gene="CELF4"
                     /coded_by="XM_041471683.1:1..1419"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regpegcnlf iyhlpqefgd
      421 aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr py
//
LOCUS       XP_041327626             472 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X13 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327626
VERSION     XP_041327626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="CUGBP Elav-like family member 4 isoform X13"
                     /calculated_mol_wt=50717
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          401..471
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..472
                     /gene="CELF4"
                     /coded_by="XM_041471692.1:1..1419"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regpegcnlf iyhlpqefgd
      421 aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr py
//
LOCUS       XP_041327633             483 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X14 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327633
VERSION     XP_041327633.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471699.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..483
                     /product="CUGBP Elav-like family member 4 isoform X14"
                     /calculated_mol_wt=51918
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          <54..376
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          412..482
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..483
                     /gene="CELF4"
                     /coded_by="XM_041471699.1:1..1452"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal
      301 nmnglaaapm tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi
      361 hpypaqspta adplqqayag vqqyagpayp aaygqisqaf pqpppmipqq qregpegcnl
      421 fiyhlpqefg daelmqmflp fgfvsfdnpa saqaaiqamn gfqigmkrlk vqlkrpkdan
      481 rpy
//
LOCUS       XP_041327642             482 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X15 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327642
VERSION     XP_041327642.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471708.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="CUGBP Elav-like family member 4 isoform X15"
                     /calculated_mol_wt=51812
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          411..481
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..482
                     /gene="CELF4"
                     /coded_by="XM_041471708.1:1..1449"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regpegcnlf
      421 iyhlpqefgd aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr
      481 py
//
LOCUS       XP_041327650             480 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X16 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327650
VERSION     XP_041327650.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471716.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..480
                     /product="CUGBP Elav-like family member 4 isoform X16"
                     /calculated_mol_wt=51658
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          409..479
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..480
                     /gene="CELF4"
                     /coded_by="XM_041471716.1:1..1443"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm
      301 nglaaapmtp tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp
      361 ypaqsptaad plqqayagvq qyaaaypaay gqisqafpqp ppmipqqqre gpegcnlfiy
      421 hlpqefgdae lmqmflpfgf vsfdnpasaq aaiqamngfq igmkrlkvql krpkdanrpy
//
LOCUS       XP_041327659             473 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X17 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327659
VERSION     XP_041327659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="CUGBP Elav-like family member 4 isoform X17"
                     /calculated_mol_wt=50788
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          402..472
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..473
                     /gene="CELF4"
                     /coded_by="XM_041471725.1:1..1422"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregpegcnl fiyhlpqefg
      421 daelmqmflp fgfvsfdnpa saqaaiqamn gfqigmkrlk vqlkrpkdan rpy
//
LOCUS       XP_041327669             473 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X18 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327669
VERSION     XP_041327669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="CUGBP Elav-like family member 4 isoform X18"
                     /calculated_mol_wt=50846
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          402..472
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..473
                     /gene="CELF4"
                     /coded_by="XM_041471735.1:1..1422"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregpegcnl fiyhlpqefg
      421 daelmqmflp fgfvsfdnpa saqaaiqamn gfqigmkrlk vqlkrpkdan rpy
//
LOCUS       XP_041327680             465 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X19 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327680
VERSION     XP_041327680.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471746.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="CUGBP Elav-like family member 4 isoform X19"
                     /calculated_mol_wt=49978
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          376..454
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..465
                     /gene="CELF4"
                     /coded_by="XM_041471746.1:1..1398"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyagpegc nlfiyhlpqe fgdaelmqmf lpfgnvissk vfvdratnqs
      421 kcfgfvsfdn pasaqaaiqa mngfqigmkr lkvqlkrpkd anrpy
//
LOCUS       XP_041327691             471 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X20 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327691
VERSION     XP_041327691.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471757.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="CUGBP Elav-like family member 4 isoform X20"
                     /calculated_mol_wt=50646
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          400..470
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..471
                     /gene="CELF4"
                     /coded_by="XM_041471757.1:1..1416"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm nglaaapmtp
      301 tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp ypaqsptaad
      361 plqqayagvq qyagpaypaa ygqisqafpq pppmipqqqr egpegcnlfi yhlpqefgda
      421 elmqmflpfg fvsfdnpasa qaaiqamngf qigmkrlkvq lkrpkdanrp y
//
LOCUS       XP_041327702             484 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X21 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327702
VERSION     XP_041327702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..484
                     /product="CUGBP Elav-like family member 4 isoform X21"
                     /calculated_mol_wt=51989
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          <54..376
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          413..483
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..484
                     /gene="CELF4"
                     /coded_by="XM_041471768.1:1..1455"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal
      301 nmnglaaapm tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi
      361 hpypaqspta adplqqayag vqqyagpaay paaygqisqa fpqpppmipq qqregpegcn
      421 lfiyhlpqef gdaelmqmfl pfgfvsfdnp asaqaaiqam ngfqigmkrl kvqlkrpkda
      481 nrpy
//
LOCUS       XP_041327704             483 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X22 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327704
VERSION     XP_041327704.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471770.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..483
                     /product="CUGBP Elav-like family member 4 isoform X22"
                     /calculated_mol_wt=51883
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          412..482
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..483
                     /gene="CELF4"
                     /coded_by="XM_041471770.1:1..1452"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregpegcnl
      421 fiyhlpqefg daelmqmflp fgfvsfdnpa saqaaiqamn gfqigmkrlk vqlkrpkdan
      481 rpy
//
LOCUS       XP_041327709             482 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X23 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327709
VERSION     XP_041327709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="CUGBP Elav-like family member 4 isoform X23"
                     /calculated_mol_wt=51847
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          411..481
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..482
                     /gene="CELF4"
                     /coded_by="XM_041471775.1:1..1449"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regpegcnlf
      421 iyhlpqefgd aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr
      481 py
//
LOCUS       XP_041327718             481 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X24 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327718
VERSION     XP_041327718.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471784.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="CUGBP Elav-like family member 4 isoform X24"
                     /calculated_mol_wt=51741
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          410..480
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..481
                     /gene="CELF4"
                     /coded_by="XM_041471784.1:1..1446"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm
      301 nglaaapmtp tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp
      361 ypaqsptaad plqqayagvq qyagpaypaa ygqisqafpq pppmipqqqr egpegcnlfi
      421 yhlpqefgda elmqmflpfg fvsfdnpasa qaaiqamngf qigmkrlkvq lkrpkdanrp
      481 y
//
LOCUS       XP_041327727             472 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X25 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327727
VERSION     XP_041327727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="CUGBP Elav-like family member 4 isoform X25"
                     /calculated_mol_wt=50717
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          401..471
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..472
                     /gene="CELF4"
                     /coded_by="XM_041471793.1:1..1419"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm nglaaapmtp
      301 tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp ypaqsptaad
      361 plqqayagvq qyagpaaypa aygqisqafp qpppmipqqq regpegcnlf iyhlpqefgd
      421 aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr py
//
LOCUS       XP_041327736             482 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X26 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327736
VERSION     XP_041327736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="CUGBP Elav-like family member 4 isoform X26"
                     /calculated_mol_wt=51812
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          411..481
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..482
                     /gene="CELF4"
                     /coded_by="XM_041471802.1:1..1449"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm
      301 nglaaapmtp tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp
      361 ypaqsptaad plqqayagvq qyagpaaypa aygqisqafp qpppmipqqq regpegcnlf
      421 iyhlpqefgd aelmqmflpf gfvsfdnpas aqaaiqamng fqigmkrlkv qlkrpkdanr
      481 py
//
LOCUS       XP_041327746             444 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X27 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327746
VERSION     XP_041327746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..444
                     /product="CUGBP Elav-like family member 4 isoform X27"
                     /calculated_mol_wt=47536
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..440
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..444
                     /gene="CELF4"
                     /coded_by="XM_041471812.1:1..1335"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyaaaypa aygqisqafp qpppmipqqq regfvsfdnp asaqaaiqam
      421 ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327753             372 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X28 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327753
VERSION     XP_041327753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="CUGBP Elav-like family member 4 isoform X28"
                     /calculated_mol_wt=39577
     Region          <2..368
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          19..99
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(21,23,25..26,29,48,50,52,60..62,64,94,96)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          283..361
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..372
                     /gene="CELF4"
                     /coded_by="XM_041471819.1:1..1119"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 mnrpiqvkpa dsesrggkdr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
       61 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      121 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      181 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      241 adplqqayag vqqyaaaypa aygqisqafp qpppmipqqq regpegcnlf iyhlpqefgd
      301 aelmqmflpf gnvisskvfv dratnqskcf gfvsfdnpas aqaaiqamng fqigmkrlkv
      361 qlkrpkdanr py
//
LOCUS       XP_041327762             445 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X29 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327762
VERSION     XP_041327762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="CUGBP Elav-like family member 4 isoform X29"
                     /calculated_mol_wt=47619
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..441
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..445
                     /gene="CELF4"
                     /coded_by="XM_041471828.1:1..1338"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyagpayp aaygqisqaf pqpppmipqq qregfvsfdn pasaqaaiqa
      421 mngfqigmkr lkvqlkrpkd anrpy
//
LOCUS       XP_041327770             454 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X30 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327770
VERSION     XP_041327770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="CUGBP Elav-like family member 4 isoform X30"
                     /calculated_mol_wt=48608
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          <54..376
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          <413..453
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..454
                     /gene="CELF4"
                     /coded_by="XM_041471836.1:1..1365"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal
      301 nmnglaaapm tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi
      361 hpypaqspta adplqqayag vqqyaaaypa aygqisqafp qpppmipqqq regfvsfdnp
      421 asaqaaiqam ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327776             453 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X31 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327776
VERSION     XP_041327776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="CUGBP Elav-like family member 4 isoform X31"
                     /calculated_mol_wt=48502
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          <412..452
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..453
                     /gene="CELF4"
                     /coded_by="XM_041471842.1:1..1362"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyaaaypaa ygqisqafpq pppmipqqqr egfvsfdnpa
      421 saqaaiqamn gfqigmkrlk vqlkrpkdan rpy
//
LOCUS       XP_041327787             446 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X32 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327787
VERSION     XP_041327787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="CUGBP Elav-like family member 4 isoform X32"
                     /calculated_mol_wt=47690
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..442
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..446
                     /gene="CELF4"
                     /coded_by="XM_041471853.1:1..1341"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal nmnglaaapm
      301 tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi hpypaqspta
      361 adplqqayag vqqyagpaay paaygqisqa fpqpppmipq qqregfvsfd npasaqaaiq
      421 amngfqigmk rlkvqlkrpk danrpy
//
LOCUS       XP_041327796             444 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X33 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327796
VERSION     XP_041327796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..444
                     /product="CUGBP Elav-like family member 4 isoform X33"
                     /calculated_mol_wt=47548
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..440
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..444
                     /gene="CELF4"
                     /coded_by="XM_041471862.1:1..1335"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regfvsfdnp asaqaaiqam
      421 ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327805             444 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X34 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327805
VERSION     XP_041327805.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471871.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..444
                     /product="CUGBP Elav-like family member 4 isoform X34"
                     /calculated_mol_wt=47490
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..440
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..444
                     /gene="CELF4"
                     /coded_by="XM_041471871.1:1..1335"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regfvsfdnp asaqaaiqam
      421 ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327814             455 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X35 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327814
VERSION     XP_041327814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="CUGBP Elav-like family member 4 isoform X35"
                     /calculated_mol_wt=48692
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          <54..376
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          <414..454
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..455
                     /gene="CELF4"
                     /coded_by="XM_041471880.1:1..1368"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal
      301 nmnglaaapm tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi
      361 hpypaqspta adplqqayag vqqyagpayp aaygqisqaf pqpppmipqq qregfvsfdn
      421 pasaqaaiqa mngfqigmkr lkvqlkrpkd anrpy
//
LOCUS       XP_041327823             454 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X36 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327823
VERSION     XP_041327823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="CUGBP Elav-like family member 4 isoform X36"
                     /calculated_mol_wt=48585
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          <413..453
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..454
                     /gene="CELF4"
                     /coded_by="XM_041471889.1:1..1365"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regfvsfdnp
      421 asaqaaiqam ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327835             445 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X37 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327835
VERSION     XP_041327835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="CUGBP Elav-like family member 4 isoform X37"
                     /calculated_mol_wt=47619
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..441
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          139..219
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(141,143,145..146,149,168,170,172,180..182,184,214,
                     216)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..445
                     /gene="CELF4"
                     /coded_by="XM_041471901.1:1..1338"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgedr klfvgmlnkq qseddvrrlf eafgnieect ilrgpdgnsk
      181 gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq qmagqmgmfn
      241 pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregfvsfdn pasaqaaiqa
      421 mngfqigmkr lkvqlkrpkd anrpy
//
LOCUS       XP_041327844             445 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X38 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327844
VERSION     XP_041327844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471910.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="CUGBP Elav-like family member 4 isoform X38"
                     /calculated_mol_wt=47561
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..441
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..445
                     /gene="CELF4"
                     /coded_by="XM_041471910.1:1..1338"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln mnglaaapmt
      301 ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih pypaqsptaa
      361 dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregfvsfdn pasaqaaiqa
      421 mngfqigmkr lkvqlkrpkd anrpy
//
LOCUS       XP_041327850             443 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X39 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327850
VERSION     XP_041327850.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471916.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..443
                     /product="CUGBP Elav-like family member 4 isoform X39"
                     /calculated_mol_wt=47419
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..439
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..443
                     /gene="CELF4"
                     /coded_by="XM_041471916.1:1..1332"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm nglaaapmtp
      301 tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp ypaqsptaad
      361 plqqayagvq qyagpaypaa ygqisqafpq pppmipqqqr egfvsfdnpa saqaaiqamn
      421 gfqigmkrlk vqlkrpkdan rpy
//
LOCUS       XP_041327859             456 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X40 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327859
VERSION     XP_041327859.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471925.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="CUGBP Elav-like family member 4 isoform X40"
                     /calculated_mol_wt=48763
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          <54..376
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          <415..455
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..456
                     /gene="CELF4"
                     /coded_by="XM_041471925.1:1..1371"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqalmqqq aaimasvaqg gylnpmaafa aaqmqqmaal
      301 nmnglaaapm tptsggstpp gitapavpsi pspigvngft glppqangqp aaeavfangi
      361 hpypaqspta adplqqayag vqqyagpaay paaygqisqa fpqpppmipq qqregfvsfd
      421 npasaqaaiq amngfqigmk rlkvqlkrpk danrpy
//
LOCUS       XP_041327868             455 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X41 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327868
VERSION     XP_041327868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="CUGBP Elav-like family member 4 isoform X41"
                     /calculated_mol_wt=48657
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          <414..454
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..455
                     /gene="CELF4"
                     /coded_by="XM_041471934.1:1..1368"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqalmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregfvsfdn
      421 pasaqaaiqa mngfqigmkr lkvqlkrpkd anrpy
//
LOCUS       XP_041327877             454 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X42 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327877
VERSION     XP_041327877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471943.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="CUGBP Elav-like family member 4 isoform X42"
                     /calculated_mol_wt=48620
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..450
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..454
                     /gene="CELF4"
                     /coded_by="XM_041471943.1:1..1365"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaypa aygqisqafp qpppmipqqq regfvsfdnp
      421 asaqaaiqam ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327886             453 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X43 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327886
VERSION     XP_041327886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="CUGBP Elav-like family member 4 isoform X43"
                     /calculated_mol_wt=48514
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..449
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..453
                     /gene="CELF4"
                     /coded_by="XM_041471952.1:1..1362"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm
      301 nglaaapmtp tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp
      361 ypaqsptaad plqqayagvq qyagpaypaa ygqisqafpq pppmipqqqr egfvsfdnpa
      421 saqaaiqamn gfqigmkrlk vqlkrpkdan rpy
//
LOCUS       XP_041327896             444 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X44 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327896
VERSION     XP_041327896.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471962.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..444
                     /product="CUGBP Elav-like family member 4 isoform X44"
                     /calculated_mol_wt=47490
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..440
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          138..218
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(140,142,144..145,148,167,169,171,179..181,183,213,
                     215)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..444
                     /gene="CELF4"
                     /coded_by="XM_041471962.1:1..1335"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrgdrk lfvgmlnkqq seddvrrlfe afgnieecti lrgpdgnskg
      181 cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq magqmgmfnp
      241 maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm nglaaapmtp
      301 tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp ypaqsptaad
      361 plqqayagvq qyagpaaypa aygqisqafp qpppmipqqq regfvsfdnp asaqaaiqam
      421 ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327905             455 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X45 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327905
VERSION     XP_041327905.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471971.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="CUGBP Elav-like family member 4 isoform X45"
                     /calculated_mol_wt=48692
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..451
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..455
                     /gene="CELF4"
                     /coded_by="XM_041471971.1:1..1368"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregfvsfdn
      421 pasaqaaiqa mngfqigmkr lkvqlkrpkd anrpy
//
LOCUS       XP_041327914             454 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X46 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327914
VERSION     XP_041327914.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471980.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="CUGBP Elav-like family member 4 isoform X46"
                     /calculated_mol_wt=48585
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          54..450
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          148..228
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(150,152,154..155,158,177,179,181,189..191,193,223,
                     225)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     CDS             1..454
                     /gene="CELF4"
                     /coded_by="XM_041471980.1:1..1365"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpshrk lfvgmlnkqq seddvrrlfe afgnieecti
      181 lrgpdgnskg cafvkyssha eaqaainalh gsqtmpgass slvvkfadtd kertmrrmqq
      241 magqmgmfnp maiqfgayga yaqlmqqqaa imasvaqggy lnpmaafaaa qmqqmaalnm
      301 nglaaapmtp tsggstppgi tapavpsips pigvngftgl ppqangqpaa eavfangihp
      361 ypaqsptaad plqqayagvq qyagpaaypa aygqisqafp qpppmipqqq regfvsfdnp
      421 asaqaaiqam ngfqigmkrl kvqlkrpkda nrpy
//
LOCUS       XP_041327922             483 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 4 isoform X47 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327922
VERSION     XP_041327922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471988.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..483
                     /product="CUGBP Elav-like family member 4 isoform X47"
                     /calculated_mol_wt=51918
     Region          47..133
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(53,55,57..58,61,80,82,84,93..95,97,127,129)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          149..229
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(151,153,155..156,159,178,180,182,190..192,194,224,
                     226)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          412..482
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..483
                     /gene="CELF4"
                     /coded_by="XM_041471988.1:16..1467"
                     /db_xref="GeneID:121355830"
ORIGIN      
        1 myikmatlan gqpdntslss nhsnpstngh mnglnhspgn pstipmkdhd aiklfigqip
       61 rnldekdlkp lfeefgkiye ltvlkdrftg mhkgcaflty ceresalkaq salheqktlp
      121 gmnrpiqvkp adsesrggse clrqdpsqdr klfvgmlnkq qseddvrrlf eafgnieect
      181 ilrgpdgnsk gcafvkyssh aeaqaainal hgsqtmpgas sslvvkfadt dkertmrrmq
      241 qmagqmgmfn pmaiqfgayg ayaqlmqqqa aimasvaqgg ylnpmaafaa aqmqqmaaln
      301 mnglaaapmt ptsggstppg itapavpsip spigvngftg lppqangqpa aeavfangih
      361 pypaqsptaa dplqqayagv qqyagpaayp aaygqisqaf pqpppmipqq qregpegcnl
      421 fiyhlpqefg daelmqmflp fgfvsfdnpa saqaaiqamn gfqigmkrlk vqlkrpkdan
      481 rpy
//
LOCUS       XP_041327932            1132 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar protein 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041327932
VERSION     XP_041327932.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041471998.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1132
                     /product="nucleolar protein 6 isoform X1"
                     /calculated_mol_wt=127708
     Region          165..305
                     /region_name="Nrap"
                     /note="Nrap protein domain 1; pfam03813"
                     /db_xref="CDD:461061"
     Region          310..450
                     /region_name="Nrap_D2"
                     /note="Nrap protein PAP/OAS-like domain; pfam17403"
                     /db_xref="CDD:465416"
     Region          453..615
                     /region_name="Nrap_D3"
                     /note="Nrap protein domain 3; pfam17404"
                     /db_xref="CDD:465417"
     Region          628..831
                     /region_name="Nrap_D4"
                     /note="Nrap protein nucleotidyltransferase domain 4;
                     pfam17405"
                     /db_xref="CDD:465418"
     Region          833..988
                     /region_name="Nrap_D5"
                     /note="Nrap protein PAP/OAS1-like domain 5; pfam17406"
                     /db_xref="CDD:465419"
     Region          990..1123
                     /region_name="Nrap_D6"
                     /note="Nrap protein domain 6; pfam17407"
                     /db_xref="CDD:465420"
     CDS             1..1132
                     /gene="NOL6"
                     /coded_by="XM_041471998.1:198..3596"
                     /db_xref="GeneID:121356001"
ORIGIN      
        1 mnqgspeaae eaeqgpeppa ggavqrgkra apgaaapqpa klsraelykp ptseeltqlk
       61 etedlfhssl lrlqieellk evtlkekkkk kidaflhein sllstipetp eteltdqawl
      121 sqdvkvpflq vpfnvkgrfr fvppaelkvv gsyllgtcvr peinvdiavt mpreifqdkd
      181 nlnqryhrkr alylshiaqh fskeklfgsv kfaymnsnhl kpilllrpqg kdekivtvrl
      241 hacpdadlfk psrfypsknn vrtawfmeqs tpkegatepp tphynnsilc dtvmlphlhf
      301 lsnaatdfpg mkdglallkv wlnqrqlskg lgcfsgflvs mlvayllmkr kivkmmsgyq
      361 vlrstlqfla ttdlsvtgis lakdadpslp vlddfhqafe vvfvdpsglv nlcadmtask
      421 yhqvqfeakr smeilddrmv dgfqvllmtp kpmlrtfdhv fhlkhvsklq gtckkmqlln
      481 elmdrggnyv aaalpfvvsl larglsqraq lvahslpqip ewpidaeppk hkdvgpltfg
      541 llfvpefats tlekgpqadh pkalefrtfw gekselrrfq dgsiceavvw eastvsqkrl
      601 ipeqiirhll klhadipess icytgalles virtgkeagg tgeealvsvv csyddlsrkl
      661 wnlkelpltv tavqgvhpal rytdvfppip vkpiysfhnr skhlllpsee kpcpayitpl
      721 kiichmegsg qwpqdkgaik rikaafhlql aellrqqhql vcrpavthtd vykdgyvfrl
      781 qvayhrepli lkevvtpegm lkyqdteesr qleletlhlp yltsslhglq qqhpvfgsts
      841 rlakrwisaq llsdsiseec vdllvaflfl hpapftppss pqvgflrfln llttfdwknn
      901 plivnlntgl tesdcteikk kfvaarahlp vmflatpkdq wssmwtrerp saqilqrlvl
      961 laseslrale eqlmdplrdq dvkmvfrppl dfydvlihln pnqiprlles vdrpvksvsr
     1021 gvvknssatn ilfpvvdydp vqlylkelrn afddlalffy dkhggeviav lwkplsfqpq
     1081 pfkvssmrgr kvttlnnelv cvpnveaile dfeilgeglv ksveartekw ti
//
LOCUS       XP_041327942            1132 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar protein 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041327942
VERSION     XP_041327942.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472008.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1132
                     /product="nucleolar protein 6 isoform X1"
                     /calculated_mol_wt=127708
     Region          165..305
                     /region_name="Nrap"
                     /note="Nrap protein domain 1; pfam03813"
                     /db_xref="CDD:461061"
     Region          310..450
                     /region_name="Nrap_D2"
                     /note="Nrap protein PAP/OAS-like domain; pfam17403"
                     /db_xref="CDD:465416"
     Region          453..615
                     /region_name="Nrap_D3"
                     /note="Nrap protein domain 3; pfam17404"
                     /db_xref="CDD:465417"
     Region          628..831
                     /region_name="Nrap_D4"
                     /note="Nrap protein nucleotidyltransferase domain 4;
                     pfam17405"
                     /db_xref="CDD:465418"
     Region          833..988
                     /region_name="Nrap_D5"
                     /note="Nrap protein PAP/OAS1-like domain 5; pfam17406"
                     /db_xref="CDD:465419"
     Region          990..1123
                     /region_name="Nrap_D6"
                     /note="Nrap protein domain 6; pfam17407"
                     /db_xref="CDD:465420"
     CDS             1..1132
                     /gene="NOL6"
                     /coded_by="XM_041472008.1:489..3887"
                     /db_xref="GeneID:121356001"
ORIGIN      
        1 mnqgspeaae eaeqgpeppa ggavqrgkra apgaaapqpa klsraelykp ptseeltqlk
       61 etedlfhssl lrlqieellk evtlkekkkk kidaflhein sllstipetp eteltdqawl
      121 sqdvkvpflq vpfnvkgrfr fvppaelkvv gsyllgtcvr peinvdiavt mpreifqdkd
      181 nlnqryhrkr alylshiaqh fskeklfgsv kfaymnsnhl kpilllrpqg kdekivtvrl
      241 hacpdadlfk psrfypsknn vrtawfmeqs tpkegatepp tphynnsilc dtvmlphlhf
      301 lsnaatdfpg mkdglallkv wlnqrqlskg lgcfsgflvs mlvayllmkr kivkmmsgyq
      361 vlrstlqfla ttdlsvtgis lakdadpslp vlddfhqafe vvfvdpsglv nlcadmtask
      421 yhqvqfeakr smeilddrmv dgfqvllmtp kpmlrtfdhv fhlkhvsklq gtckkmqlln
      481 elmdrggnyv aaalpfvvsl larglsqraq lvahslpqip ewpidaeppk hkdvgpltfg
      541 llfvpefats tlekgpqadh pkalefrtfw gekselrrfq dgsiceavvw eastvsqkrl
      601 ipeqiirhll klhadipess icytgalles virtgkeagg tgeealvsvv csyddlsrkl
      661 wnlkelpltv tavqgvhpal rytdvfppip vkpiysfhnr skhlllpsee kpcpayitpl
      721 kiichmegsg qwpqdkgaik rikaafhlql aellrqqhql vcrpavthtd vykdgyvfrl
      781 qvayhrepli lkevvtpegm lkyqdteesr qleletlhlp yltsslhglq qqhpvfgsts
      841 rlakrwisaq llsdsiseec vdllvaflfl hpapftppss pqvgflrfln llttfdwknn
      901 plivnlntgl tesdcteikk kfvaarahlp vmflatpkdq wssmwtrerp saqilqrlvl
      961 laseslrale eqlmdplrdq dvkmvfrppl dfydvlihln pnqiprlles vdrpvksvsr
     1021 gvvknssatn ilfpvvdydp vqlylkelrn afddlalffy dkhggeviav lwkplsfqpq
     1081 pfkvssmrgr kvttlnnelv cvpnveaile dfeilgeglv ksveartekw ti
//
LOCUS       XP_041327950            1131 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar protein 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041327950
VERSION     XP_041327950.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472016.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1131
                     /product="nucleolar protein 6 isoform X2"
                     /calculated_mol_wt=127536
     Region          164..304
                     /region_name="Nrap"
                     /note="Nrap protein domain 1; pfam03813"
                     /db_xref="CDD:461061"
     Region          309..449
                     /region_name="Nrap_D2"
                     /note="Nrap protein PAP/OAS-like domain; pfam17403"
                     /db_xref="CDD:465416"
     Region          452..614
                     /region_name="Nrap_D3"
                     /note="Nrap protein domain 3; pfam17404"
                     /db_xref="CDD:465417"
     Region          627..830
                     /region_name="Nrap_D4"
                     /note="Nrap protein nucleotidyltransferase domain 4;
                     pfam17405"
                     /db_xref="CDD:465418"
     Region          832..987
                     /region_name="Nrap_D5"
                     /note="Nrap protein PAP/OAS1-like domain 5; pfam17406"
                     /db_xref="CDD:465419"
     Region          989..1122
                     /region_name="Nrap_D6"
                     /note="Nrap protein domain 6; pfam17407"
                     /db_xref="CDD:465420"
     CDS             1..1131
                     /gene="NOL6"
                     /coded_by="XM_041472016.1:872..4267"
                     /db_xref="GeneID:121356001"
ORIGIN      
        1 magspeaaee aeqgpeppag gavqrgkraa pgaaapqpak lsraelykpp tseeltqlke
       61 tedlfhssll rlqieellke vtlkekkkkk idaflheins llstipetpe teltdqawls
      121 qdvkvpflqv pfnvkgrfrf vppaelkvvg syllgtcvrp einvdiavtm preifqdkdn
      181 lnqryhrkra lylshiaqhf skeklfgsvk faymnsnhlk pilllrpqgk dekivtvrlh
      241 acpdadlfkp srfypsknnv rtawfmeqst pkegateppt phynnsilcd tvmlphlhfl
      301 snaatdfpgm kdglallkvw lnqrqlskgl gcfsgflvsm lvayllmkrk ivkmmsgyqv
      361 lrstlqflat tdlsvtgisl akdadpslpv lddfhqafev vfvdpsglvn lcadmtasky
      421 hqvqfeakrs meilddrmvd gfqvllmtpk pmlrtfdhvf hlkhvsklqg tckkmqllne
      481 lmdrggnyva aalpfvvsll arglsqraql vahslpqipe wpidaeppkh kdvgpltfgl
      541 lfvpefatst lekgpqadhp kalefrtfwg ekselrrfqd gsiceavvwe astvsqkrli
      601 peqiirhllk lhadipessi cytgallesv irtgkeaggt geealvsvvc syddlsrklw
      661 nlkelpltvt avqgvhpalr ytdvfppipv kpiysfhnrs khlllpseek pcpayitplk
      721 iichmegsgq wpqdkgaikr ikaafhlqla ellrqqhqlv crpavthtdv ykdgyvfrlq
      781 vayhreplil kevvtpegml kyqdteesrq leletlhlpy ltsslhglqq qhpvfgstsr
      841 lakrwisaql lsdsiseecv dllvaflflh papftppssp qvgflrflnl lttfdwknnp
      901 livnlntglt esdcteikkk fvaarahlpv mflatpkdqw ssmwtrerps aqilqrlvll
      961 aseslralee qlmdplrdqd vkmvfrppld fydvlihlnp nqiprllesv drpvksvsrg
     1021 vvknssatni lfpvvdydpv qlylkelrna fddlalffyd khggeviavl wkplsfqpqp
     1081 fkvssmrgrk vttlnnelvc vpnveailed feilgeglvk sveartekwt i
//
LOCUS       XP_041327964             228 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipase A2 inhibitor subunit gamma B-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041327964
VERSION     XP_041327964.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472030.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="phospholipase A2 inhibitor subunit gamma B-like"
                     /calculated_mol_wt=23895
     Region          20..100
                     /region_name="TFP_LU_ECD_PLIG"
                     /note="extracellular domain (ECD) found in Elaphe
                     quadrivirgata phospholipase A2 inhibitor gamma subunit
                     (gamma-PLI) family; cd23588"
                     /db_xref="CDD:467117"
     Region          114..192
                     /region_name="TFP_LU_ECD_PINLYP_rpt2"
                     /note="second extracellular domain (ECD) found in
                     phospholipase A2 inhibitor and Ly6/PLAUR domain-containing
                     protein (PINLYP) and similar proteins; cd23572"
                     /db_xref="CDD:467102"
     CDS             1..228
                     /gene="LOC121356015"
                     /coded_by="XM_041472030.1:55..741"
                     /db_xref="GeneID:121356015"
ORIGIN      
        1 mrlslglsfl lafldpgtcl qceichsigk scsgpmktct ggedtcgiil hevliggmai
       61 sssiksclps hvchlgpvtv nygkvkaksh lvcctgddcr ttsvslppdn dvpngyqcpa
      121 cysvdsfqcs nevvnctgse dqcvdlaglm nagglslkaa mkgcttisec smvgdeknsl
      181 gmmdiklkrf qcrpasamys vvysagiapp httflpvlsg filekvlf
//
LOCUS       XP_041327976             294 aa            linear   VRT 06-MAY-2021
DEFINITION  aquaporin-3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041327976
VERSION     XP_041327976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="aquaporin-3-like"
                     /calculated_mol_wt=31382
     Region          23..265
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cd00333"
                     /db_xref="CDD:238204"
     Site            order(63,81..83,211..212,215,218)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(83..85,215..217)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..294
                     /gene="LOC121356021"
                     /coded_by="XM_041472042.1:96..980"
                     /db_xref="GeneID:121356021"
ORIGIN      
        1 mgrqkdvlat ieehlrirnk lvrqalaecl gtlilvlfgc gsvaqiilsr gthggfltvn
       61 lafgfavtlg iliagqvsgg hlnpavtfam cllarepwik lpiyalaqtl gaflgagivf
      121 glyydaiwaf dnnqltvigk natagifaty psehlnvvng ffdqfigtas livcvlaivd
      181 pynnpvptgl eaftvgfvvl vigtsmgfns gyavnpardf gprlftaiag wgtevfrvgk
      241 pshwwwvpvv apflgavagv ivyqltigch depsppaseq etvklanvkh kerv
//
LOCUS       XP_041327990             283 aa            linear   VRT 06-MAY-2021
DEFINITION  aquaporin-7-like [Pyrgilauda ruficollis].
ACCESSION   XP_041327990
VERSION     XP_041327990.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472056.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="aquaporin-7-like"
                     /calculated_mol_wt=30089
     Region          16..259
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     Site            order(57,75..77,205..206,209,212)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(77..79,209..211)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..283
                     /gene="LOC121356027"
                     /coded_by="XM_041472056.1:1..852"
                     /db_xref="GeneID:121356027"
ORIGIN      
        1 mlektkkafr ihntavrgml aealgtfilm vfglssvaqv vlgrgnsgqy lsiniafgig
       61 vtlgiyaagk isgahlnaai titqcvlgni swttlvayit gqflgsftaa atvfalyyea
      121 iysytngnft vtgptatami fstypasnvs lkgaffteft atvmlilgil vihdeknnaa
      181 tkgaqpmltg vlvlgiglgm glntgyainp srdlpprift aiagwgtavf tahhswwwip
      241 vaapilgslf gvliyklcid fhnqpghete hekeqadmet skl
//
LOCUS       XP_041328002             652 aa            linear   VRT 06-MAY-2021
DEFINITION  protein hinderin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041328002
VERSION     XP_041328002.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472068.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..652
                     /product="protein hinderin isoform X1"
                     /calculated_mol_wt=72263
     Region          90..450
                     /region_name="KIAA1328"
                     /note="Uncharacterized protein KIAA1328; pfam15369"
                     /db_xref="CDD:464679"
     CDS             1..652
                     /gene="KIAA1328"
                     /coded_by="XM_041472068.1:28..1986"
                     /db_xref="GeneID:121356035"
ORIGIN      
        1 maaaaagvgg garrgrdssd eedplvpgsg vstkgnlrtr clpkyqtget elkvpvavas
       61 vsmdpdrgtg gltgqqstne ggmksaslkd lcpedkrria nlikelarvs eekevteerl
      121 kaeqesfekk irqleeqnel iikerealqq qyrecqells lyqkylaeqq eklshslsel
      181 saakekeqke lvnwsspsaa ashwtatgay gfsvppefvp lqvsskksls qqhslglgsp
      241 clgvggawtl hknsrapkav sparivlsqp crnnhdyrte mhynpqeclk eypmendlhr
      301 kcnnvispak qrsphhvkqa qemdqrasef qstcpqqvsh gcawrhvgns gsveesccvs
      361 qvlrkhsgtv hktydhsrhc sgsrlnhstd sgpaetelak rlyeerrqkl llqkmeleie
      421 kerlqhlltk qeaklllkqq qlhqsrmdyn rvrghvpgse dvpiaeiprd lalmmngssm
      481 glsvpvlkhe dyllrtspvs knsrkpgssh gsssrkkmvg fgvnrddgqs pqmqtkregt
      541 ksrkgttsgl rkdaaispgl mgssrvpatt avspiqhdps ryqaslldlv eamnpipasg
      601 qlcrepcdrn kphppccash rlssswcqtp csprsradel eesrlleeif fi
//
LOCUS       XP_041328011             619 aa            linear   VRT 06-MAY-2021
DEFINITION  protein hinderin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041328011
VERSION     XP_041328011.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472077.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="protein hinderin isoform X2"
                     /calculated_mol_wt=68776
     Region          90..417
                     /region_name="KIAA1328"
                     /note="Uncharacterized protein KIAA1328; pfam15369"
                     /db_xref="CDD:464679"
     CDS             1..619
                     /gene="KIAA1328"
                     /coded_by="XM_041472077.1:6..1865"
                     /db_xref="GeneID:121356035"
ORIGIN      
        1 maaaaagvgg garrgrdssd eedplvpgsg vstkgnlrtr clpkyqtget elkvpvavas
       61 vsmdpdrgtg gltgqqstne ggmksaslkd lcpedkrria nlikelarvs eekevteerl
      121 kaeqesfekk irqleeqnel iikerealqq qyrecqells lyqkylaeqq eklshslsel
      181 saakekeqkv sskkslsqqh slglgspclg vggawtlhkn srapkavspa rivlsqpcrn
      241 nhdyrtemhy npqeclkeyp mendlhrkcn nvispakqrs phhvkqaqem dqrasefqst
      301 cpqqvshgca wrhvgnsgsv eesccvsqvl rkhsgtvhkt ydhsrhcsgs rlnhstdsgp
      361 aetelakrly eerrqklllq kmeleieker lqhlltkqea klllkqqqlh qsrmdynrvr
      421 ghvpgsedvp iaeiprdlal mmngssmgls vpvlkhedyl lrtspvskns rkpgsshgss
      481 srkkmvgfgv nrddgqspqm qtkregtksr kgttsglrkd aaispglmgs srvpattavs
      541 piqhdpsryq aslldlveam npipasgqlc repcdrnkph ppccashrls sswcqtpcsp
      601 rsradelees rlleeiffi
//
LOCUS       XP_041328024             291 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin polyglutamylase complex subunit 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328024
VERSION     XP_041328024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="tubulin polyglutamylase complex subunit 2
                     isoform X1"
                     /calculated_mol_wt=32581
     Region          40..189
                     /region_name="SMI1_KNR4"
                     /note="SMI1 / KNR4 family; smart00860"
                     /db_xref="CDD:214864"
     CDS             1..291
                     /gene="TPGS2"
                     /coded_by="XM_041472090.1:49..924"
                     /db_xref="GeneID:121356049"
ORIGIN      
        1 meeklptgik pyldkltlgv triletspgv aevtfvekep aerhtivswe qknscvlped
       61 lknfylmtdg fqmtwsvktd dtpmplgsmv insvsklcrl ggssmytlps aptladledd
      121 tdeegngdkp ekphfdsrsl ifeldpcngn gkvclvykha epvvspdtei wfldralywh
      181 fltktftayy rllithlglp qwqyaftsyg vspqakqwfn mykpitinta llseeadsfv
      241 nkldpnkvfk sknktpvlkk kqpsqppgsq kshtsmtsak tsslagnssr k
//
LOCUS       XP_041328033             156 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin polyglutamylase complex subunit 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328033
VERSION     XP_041328033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="tubulin polyglutamylase complex subunit 2
                     isoform X2"
                     /calculated_mol_wt=17079
     Region          40..>77
                     /region_name="SMI1_KNR4"
                     /note="SMI1 / KNR4 family; smart00860"
                     /db_xref="CDD:214864"
     CDS             1..156
                     /gene="TPGS2"
                     /coded_by="XM_041472099.1:35..505"
                     /db_xref="GeneID:121356049"
ORIGIN      
        1 meeklptgik pyldkltlgv triletspgv aevtfvekep aerhtivswe qknscvlped
       61 lknfylmtdg fqmtwsvktd dtpmplgsmv insvsklcrl ggssmytlps aptladledd
      121 tdeegsimcl isslqpwqvg lyavnvlgis vtcilf
//
LOCUS       XP_041328062             152 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 R2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328062
VERSION     XP_041328062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472128.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..152
                     /product="ubiquitin-conjugating enzyme E2 R2-like"
                     /calculated_mol_wt=17012
     Region          47..>152
                     /region_name="UBCc_UEV"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain/ubiquitin E2 variant (UEV) domain; cl49610"
                     /db_xref="CDD:483950"
     CDS             1..152
                     /gene="LOC121356065"
                     /coded_by="XM_041472128.1:1..459"
                     /db_xref="GeneID:121356065"
ORIGIN      
        1 mttsyicgey ennmlgtaka pgsaaplkar gggrgarqrv rrgrgpelks lqeepvegfr
       61 itlvdesdly nwevaifgpp ntlyeggyfk ahikfpidyp yspptfrflt kmwhpniyen
      121 gdvcisilhp pvddpqsgel pserwnptqn vr
//
LOCUS       XP_041328073             283 aa            linear   VRT 06-MAY-2021
DEFINITION  urease accessory protein UreE-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328073
VERSION     XP_041328073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472139.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508878.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>283
                     /product="urease accessory protein UreE-like"
     CDS             1..283
                     /gene="LOC121356074"
                     /coded_by="XM_041472139.1:12..>859"
                     /db_xref="GeneID:121356074"
ORIGIN      
        1 mmmmmatkvt katmmvmmaa mtmgivtkat vvtmmkmmat kamdivtgat kdtmatvrmm
       61 vatkpmdivt matmmmmmaa mateamakvt kattmvlmat mmmmmatkat kdtkamakav
      121 matmmkmmat kamakvtkat mmvmmvamtm dvvtkatvat vrvmmatkvt katmrvmmaa
      181 mvatvaipvv vsaarvgcgh sghdghcghr dngrhghrhn ghhdrcpdgr rgddhdhqng
      241 rrghhdhhdd dhdhqnghqg hhehghqghh dhhddghhdd dhg
//
LOCUS       XP_041328089             509 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 574, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328089
VERSION     XP_041328089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508878.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>509
                     /product="zinc finger protein 574"
     Region          213..233
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(218,220,222,224..225,228..229,232,245,247,251..252,
                     255..256,259,273,275,277,279..280,283..284,287)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          240..260
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          268..288
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          297..316
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          317..>361
                     /region_name="lambda-1"
                     /note="inner capsid protein lambda-1 or VP3; cd11674"
                     /db_xref="CDD:212564"
     Region          338..359
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(338,341,354,359)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:212564"
     Region          <364..509
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          367..387
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(372,374,376,378..379,382..383,386,400,402,406..407,
                     410..411,414,428,430,432,434..435,438..439,442)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          395..415
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          423..443
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          451..471
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          479..499
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..509
                     /gene="ZNF574"
                     /coded_by="XM_041472155.1:2..>1528"
                     /db_xref="GeneID:121356078"
ORIGIN      
        1 msspeetlll lehryvcsec shlspsleea llphqhhlqp paagpqtqfp apppahphle
       61 llgvpaelep psqfqclecg allltpgqll ehqelhlkll aepprpspns aihfecpecr
      121 alfqsqelwl ahrqshrnap nppqnptrvd lehsyrkhga dgaaeppada essvqlllye
      181 cgeclqlfqt pkdflehqsa hlappapppe prcqhcrell psarllrrhl rchalgafqc
      241 plcprvlpdp aelrrhragh agdslflcld cgsaldteaa llahrrghgv aeplhrcacg
      301 ktfasmtkfl yhrrshaapg sipapeplle qpevslacgt cqkafpsaaa larhqrfvhr
      361 lerrhrcgac gksfkksshl rnharthtge rpfpcgecgr rfssranllr hrlthtgerp
      421 hqcpecgkrf aqnstlrqhl qlhlrrfphr cgdcglrfrr phrlllhrah hsgeypykcp
      481 qcgctfllrr lldvhllgha gkeparcqg
//
LOCUS       XP_041328101             185 aa            linear   VRT 06-MAY-2021
DEFINITION  galactose-3-O-sulfotransferase 2-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328101
VERSION     XP_041328101.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472167.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508882.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>185
                     /product="galactose-3-O-sulfotransferase 2-like"
     Region          <1..>170
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; cl22970"
                     /db_xref="CDD:451469"
     CDS             1..185
                     /gene="LOC121356083"
                     /coded_by="XM_041472167.1:<1..>554"
                     /db_xref="GeneID:121356083"
ORIGIN      
        1 aqvqrvmpnd sfyfsivrdp gavaessfsy fraaapafrn spslsaflas psrffragqr
       61 gnhyarnlqw fdfglpepag paeipamlen lervfplvll aerfdeslvl lrhrlcwprd
      121 avdsfrqnar gaaprlsaeq lrrlrawnsl dwalyshfnr sfwreaerfg lerlrreaae
      181 lrrrr
//
LOCUS       XP_041328112             488 aa            linear   VRT 06-MAY-2021
DEFINITION  glutenin, high molecular weight subunit DX5-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041328112
VERSION     XP_041328112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472178.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508933.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>488
                     /product="glutenin, high molecular weight subunit
                     DX5-like"
     Region          288..>385
                     /region_name="Plasmodium_HRP"
                     /note="Plasmodium histidine-rich protein (HRPII/III);
                     pfam05403"
                     /db_xref="CDD:253181"
     CDS             1..488
                     /gene="LOC121356091"
                     /coded_by="XM_041472178.1:66..>1530"
                     /db_xref="GeneID:121356091"
ORIGIN      
        1 mtspngvlal spdpmtspng vvplspdpmt spgglvappr sptsppgppr lwgqraalea
       61 sarprpprpl sprgdtsedd deagaagrvt vtprgryfgy artvvapala lsplspcpri
      121 rqldgaddga rgtagtegta gtgpppaevp pppeglppdi vdfvlrgvtg hgdsngdtat
      181 ngdtaatngd tavtngdmaa tngdmaatng dmavtngdta atngawqgqr lgdigqghrl
      241 gdirqghqlg didqshqlgd iaechrlgdi rqgqrlgdid qghrlgdisq shqlgdiaqg
      301 hqlgnaqghh lgdigqghhl gdigqgqqls dviqghrlgd igqghqlgdi gqghhhvrna
      361 qghhpgdigq ghhpgdigqg hhpgdmgqgq rqlgdisqgh qlgatapngh gdalgtpwgh
      421 pkrpgegtgp gtkrprleld tgdsglkeep eelmsdscgs ppgdvtaepp waacagggga
      481 gpfgenlg
//
LOCUS       XP_041328125             182 aa            linear   VRT 06-MAY-2021
DEFINITION  CTD nuclear envelope phosphatase 1, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328125
VERSION     XP_041328125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472191.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508966.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>182
                     /product="CTD nuclear envelope phosphatase 1"
     Region          57..>182
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     CDS             1..182
                     /gene="CTDNEP1"
                     /coded_by="XM_041472191.1:1..>546"
                     /db_xref="GeneID:121356098"
ORIGIN      
        1 maapaaapve prwnlgipef rgppkfgvsq viqyqtvryd vlplspisrn rlnqvkrkil
       61 vldldetlih shhdgvlrpt vrpgtppdfi lkvvidkhpv rffvhkrphv dfflevvsqw
      121 yelvvftasm eiygcavadk ldnnrsilnr ryyrqhctle lgsyikdlsv vhsdlssivi
      181 ld
//
LOCUS       XP_041328134             192 aa            linear   VRT 06-MAY-2021
DEFINITION  toll-like receptor 2 type-2, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328134
VERSION     XP_041328134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472200.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508968.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>192
                     /product="toll-like receptor 2 type-2"
     Region          24..43
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <42..>176
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          44..67
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          67..124
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          68..91
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          92..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          116..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          141..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..192
                     /gene="LOC121356106"
                     /coded_by="XM_041472200.1:1..>576"
                     /db_xref="GeneID:121356106"
ORIGIN      
        1 mvlaaslskq qalkqacpsc dasqlcncss mglefippgl takitvlnlt hnrikriqsq
       61 dlqqavnlrt lllqsnqiss idedsfqsla klelldlsnn slahlspvwf ghlfslqhly
      121 lqgnsyrdlg qsspfsslrn lsslhlgnaq fsvirqgnfe giellhklwi dgsnlsqyeq
      181 gslksikqin hm
//
LOCUS       XP_041328146             515 aa            linear   VRT 06-MAY-2021
DEFINITION  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041328146
VERSION     XP_041328146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472212.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="succinyl-CoA:3-ketoacid coenzyme A transferase
                     1, mitochondrial isoform X1"
                     /calculated_mol_wt=55958
     Region          39..277
                     /region_name="AtoD"
                     /note="Acyl CoA:acetate/3-ketoacid CoA transferase, alpha
                     subunit [Lipid transport and metabolism]; COG1788"
                     /db_xref="CDD:441394"
     Region          297..505
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     CDS             1..515
                     /gene="OXCT1"
                     /coded_by="XM_041472212.1:146..1693"
                     /db_xref="GeneID:121356114"
ORIGIN      
        1 maafkfllpp lgrrillpaa rraeicgcyf stschrntkf ytdpveavkd ipngatilvg
       61 gfglcgipen liggllktgv kgitavsnna gvdnfglgll lqtkqikrmv ssyvgenaef
      121 erqylsgele veltpqgtla eriraggagi pafytstgyg tlvqeggapi kyntdgtiai
      181 asqprevref dgrhfileks itgdfalvka wkadragnii frktarnfnq pmckaakttv
      241 veveeivdig afapedihvp kiyvdrllqg ekfekrierl sirkpedsta kqkkgdnvre
      301 riikraalef edgmyanlgi gipllasnfi spditvhlqs engvlglgpy plenevdpdl
      361 inagketvtv lpgssyfssd esfamirggh vdltmlgamq vskygdlanw mipgkmvkgm
      421 ggamdlvssa qtkvvvtmeh sakgnvhkil ekcslpltgk qcvdriitek avfdvdkkkg
      481 ltlieiwegl tvddikkstg cdfavspkli pmrqi
//
LOCUS       XP_041328154             515 aa            linear   VRT 06-MAY-2021
DEFINITION  succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041328154
VERSION     XP_041328154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="succinyl-CoA:3-ketoacid coenzyme A transferase
                     1, mitochondrial isoform X2"
                     /calculated_mol_wt=55958
     Region          39..277
                     /region_name="AtoD"
                     /note="Acyl CoA:acetate/3-ketoacid CoA transferase, alpha
                     subunit [Lipid transport and metabolism]; COG1788"
                     /db_xref="CDD:441394"
     Region          297..505
                     /region_name="SugarP_isomerase"
                     /note="Sugar Phosphate Isomerase family; includes type A
                     ribose 5-phosphate isomerase (RPI_A),
                     glucosamine-6-phosphate (GlcN6P) deaminase, and
                     6-phosphogluconolactonase (6PGL). RPI catalyzes the
                     reversible conversion of ribose-5-phosphate to
                     ribulose...; cl00339"
                     /db_xref="CDD:469729"
     CDS             1..515
                     /gene="OXCT1"
                     /coded_by="XM_041472220.1:147..1694"
                     /db_xref="GeneID:121356114"
ORIGIN      
        1 maafkfllpp lgrrillpaa rraeicgcyf stschrntkf ytdpveavkd ipngatilvg
       61 gfglcgipen liggllktgv kgitavsnna gvdnfglgll lqtkqikrmv ssyvgenaef
      121 erqylsgele veltpqgtla eriraggagi pafytstgyg tlvqeggapi kyntdgtiai
      181 asqprevref dgrhfileks itgdfalvka wkadragnii frktarnfnq pmckaakttv
      241 veveeivdig afapedihvp kiyvdrllqg ekfekrierl sirkpedsta kqkkgdnvre
      301 riikraalef edgmyanlgi gipllasnfi spditvhlqs engvlglgpy plenevdpdl
      361 inagketvtv lpgssyfssd esfamirggh vdltmlgamq vskygdlanw mipgkmvkgm
      421 ggamdlvssa qtkvvvtmeh sakgnvhkil ekcslpltgk qcvdriitek avfdvdkkkg
      481 ltlieiwegl tvddikkstg cdfavspkli pmrqi
//
LOCUS       XP_041328174             357 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041328174
VERSION     XP_041328174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="F-box only protein 4 isoform X1"
                     /calculated_mol_wt=39959
     Region          26..75
                     /region_name="F-box_FBXO4"
                     /note="F-box domain found in F-box only protein 4 (FBXO4)
                     and similar proteins; cd22085"
                     /db_xref="CDD:438857"
     Site            order(26..29,31,34..35,38..39,42..43,45,47,49..56,58..59,
                     63)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438857"
     Region          131..354
                     /region_name="FBX4_GTPase_like"
                     /note="C-terminal GTPase-like domain of F-Box Only Protein
                     4; cd11656"
                     /db_xref="CDD:212555"
     Site            order(134,140)
                     /site_type="other"
                     /note="SKP1 binding interface [polypeptide binding]"
                     /db_xref="CDD:212555"
     Site            order(310,312..313,315,326..327,329,331)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:212555"
     Site            order(311..312,315..316,327..331,342)
                     /site_type="other"
                     /note="TRF1 binding interface [polypeptide binding]"
                     /db_xref="CDD:212555"
     CDS             1..357
                     /gene="FBXO4"
                     /coded_by="XM_041472240.1:36..1109"
                     /db_xref="GeneID:121356133"
ORIGIN      
        1 mrgtrepgrt apapppaapd gahgvstlqt lpidvqlnim sflspqdlcr lgstscywra
       61 avqdpllwry fllrdlpswt sidwkslpde eifnkafsev gdnalydyma vykrscpqgr
      121 rslkssrpry gtvtsflqsl vtqaeprfam fgpgleqldn slvqkmmtcp eillvaglph
      181 rqihgigsgv sfqfnnnqkf nivtlystts verrrareeq avavnkmfyq enstegnqqa
      241 mhysviaqvr kvcevvdgfi yvanaeahre hdrqeelari lamvdpalgp pnrpllvlsc
      301 vshvgvkrip cvyvahqlql nllhqpwmmq dtvaatldgl lngiewllae anyksaq
//
LOCUS       XP_041328182             318 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041328182
VERSION     XP_041328182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="F-box only protein 4 isoform X2"
                     /calculated_mol_wt=35973
     Region          <1..36
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Region          92..315
                     /region_name="FBX4_GTPase_like"
                     /note="C-terminal GTPase-like domain of F-Box Only Protein
                     4; cd11656"
                     /db_xref="CDD:212555"
     Site            order(95,101)
                     /site_type="other"
                     /note="SKP1 binding interface [polypeptide binding]"
                     /db_xref="CDD:212555"
     Site            order(271,273..274,276,287..288,290,292)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:212555"
     Site            order(272..273,276..277,288..292,303)
                     /site_type="other"
                     /note="TRF1 binding interface [polypeptide binding]"
                     /db_xref="CDD:212555"
     CDS             1..318
                     /gene="FBXO4"
                     /coded_by="XM_041472248.1:150..1106"
                     /db_xref="GeneID:121356133"
ORIGIN      
        1 msflspqdlc rlgstscywr aavqdpllwr yfllrdlpsw tsidwkslpd eeifnkafse
       61 vgdnalydym avykrscpqg rrslkssrpr ygtvtsflqs lvtqaeprfa mfgpgleqld
      121 nslvqkmmtc peillvaglp hrqihgigsg vsfqfnnnqk fnivtlystt sverrraree
      181 qavavnkmfy qenstegnqq amhysviaqv rkvcevvdgf iyvanaeahr ehdrqeelar
      241 ilamvdpalg ppnrpllvls cvshvgvkri pcvyvahqlq lnllhqpwmm qdtvaatldg
      301 llngiewlla eanyksaq
//
LOCUS       XP_041328195            1713 aa            linear   VRT 06-MAY-2021
DEFINITION  rapamycin-insensitive companion of mTOR [Pyrgilauda ruficollis].
ACCESSION   XP_041328195
VERSION     XP_041328195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1713
                     /product="rapamycin-insensitive companion of mTOR"
                     /calculated_mol_wt=192152
     Region          58..437
                     /region_name="RICTOR_N"
                     /note="Rapamycin-insensitive companion of mTOR, N-term;
                     pfam14664"
                     /db_xref="CDD:464246"
     Region          636..739
                     /region_name="RICTOR_M"
                     /note="Rapamycin-insensitive companion of mTOR, middle
                     domain; pfam14666"
                     /db_xref="CDD:464248"
     Region          746..852
                     /region_name="RasGEF_N_2"
                     /note="Rapamycin-insensitive companion of mTOR RasGEF_N
                     domain; pfam14663"
                     /db_xref="CDD:464245"
     Region          921..990
                     /region_name="RICTOR_V"
                     /note="Rapamycin-insensitive companion of mTOR, domain 5;
                     pfam14668"
                     /db_xref="CDD:464249"
     Region          1085..1194
                     /region_name="RICTOR_phospho"
                     /note="Rapamycin-insensitive companion of mTOR,
                     phosphorylation-site; pfam14665"
                     /db_xref="CDD:464247"
     CDS             1..1713
                     /gene="RICTOR"
                     /coded_by="XM_041472261.1:38..5179"
                     /db_xref="GeneID:121356144"
ORIGIN      
        1 maatlrarsl rhlrirgrnd sgeenvsldl srdpcdnmre ilqnvaklqg vsnmrklghl
       61 nnftkllcni ghaeeklgft ydsiiiclrl allneakevr aaglralryl irdstilqkv
      121 lklkvdylia rcidiqqsne vertqalrlv rkmitvnasl fpssitnsli avgndglqer
      181 drmvraciai icelalqnpe vvalrgglst ilknvidcql srinealitt vlhlinhpkt
      241 rqyvradvel erilapytdf hyrhnpdtae gqlkedrear flaskmgiva afrswagiis
      301 lckpgnsgiq sligvlcipn meirrgllev lydifrlplp viaeefieal lsvdpgrfqd
      361 cwrlsdgfva aeaktvlphr arsrpdlmdn ylalvlsafi tnglleglve vitssddhvs
      421 vratillgel lhmantilph shshhlhclp tlmnmaasfd imkekrqras aalnclkrfh
      481 emkkrgpkpy slhldhiiqk aisthqkrdq yrvqkdifil kdteealimn lrdsqvlnhk
      541 enldwnwnli gtilkwpnin lrnykdeqlh rfvrrllyfy kpssklyanl dldyakakql
      601 tvvgcqftef lleseedgqg yleelvkdiv lwlnsssgmk perslqnngl lntlsqhyfl
      661 ffgtlschph gvkmlekcnv fqcllnlcsl knqdhllklt vssldysrdg larvilskil
      721 taatdscrly atkhlrvllr anveffsnwg iellvtqlhd knktisseal dildeacedk
      781 anlhaliqmk palshlgdkg lllllrflsi pkgfsylner gyvtkqmekw qkeynlkyve
      841 lieeqlneal ttyrkpvdgd nyvrrsnqrl qrphvylpvh lygqlvhhkt gchllesqsi
      901 vtdlsytvrs pmldkwegik qlkaalwalg nigssnwgln llqeenvipd imalaqhcev
      961 lsvrgtcvyv lgliaktkqg cdilkhhnwd avrhsrrqpw pvvpddmeql cnelssipst
     1021 lslnsestss rhnsesesap ssmfimeddr fgstststff lditedaeqi fydrpgpskd
     1081 kdrspfpffs ssrlvknril nsltlpnkkh rsssdpkggk ltssdsksgl rrnrtvteps
     1141 gsidfpagee lnpvfrvpki qtlrletsfv gskhaedtdc tqsigendlk lpkglgneih
     1201 rentskerli gdgttqthfk srslsfntdt ttsgissmss spsretvgvd ttnvdtdcgs
     1261 lstvvstktv kpshcstpqs nhlplsksns vslvppgssh tlprraqslk apslatiksl
     1321 adynfsytss rdafgyatlk rlqqqrmhps lshsealasp akdvlftdti tmksgsldsr
     1381 ltpsrfmkal syasldkedl lspinqntlq rsssvrsmvs natygssddy iglalpvdin
     1441 eifqvketpy fqkkttppfd ehgsrvftsd agglpsgasd avkspfqmlr qqislteimn
     1501 tsrsdacqfl egtedtglqe htdenclycv ciqilgyqpn tkasssynrt dfsdipytdw
     1561 cgqtihnhld vhsskfsgis gcsdavshgs asstkstelv lgvksipddt pvcrillrke
     1621 vlrlvinlss svgtkghetg lltikekypq afddiclyse vsyllahctf rlpsrrfiqe
     1681 lfqdvqflqm heeaeailat ptqqpvidas aes
//
LOCUS       XP_041328222            1023 aa            linear   VRT 06-MAY-2021
DEFINITION  pikachurin [Pyrgilauda ruficollis].
ACCESSION   XP_041328222
VERSION     XP_041328222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1023
                     /product="pikachurin"
                     /calculated_mol_wt=111741
     Region          40..146
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(135..136,138..139)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          155..247
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(155,221,236)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(237..238,240..241)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          405..555
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          574..616
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(574,577,597)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          642..779
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          <805..834
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          874..999
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     CDS             1..1023
                     /gene="EGFLAM"
                     /coded_by="XM_041472288.1:118..3189"
                     /db_xref="GeneID:121356157"
ORIGIN      
        1 mevpggchrr clalvlllas cigcaatprr niprrqdrlg ppldilldsv nctafsvqwk
       61 mpkqhastit gytvfyseve gdkavkqlsh dvplsldmis mgqlegqaif dvvigglkpg
      121 tphrvsvgay swagkgrpsm prevttlsqd kcmppappyq pqivvvsdse valswkpgvs
      181 egsspiqyym vefirpdlds nwtvireqiq mesmvlkgll pntkyqfair aansfgsspa
      241 stpsdvirtf sseelgsgsy ghryvtdtvt gdgdgfdidd sdydiyieel rplpaikggn
      301 rkflvetkvt pgsssrllsr vltttseptt staastqpas taraarrgsa spaarlfdlp
      361 cdeavcsads fcindydrgg srchcnlgka gdtceedisi qypqfsgysy itfeplkksy
      421 qtfqitlefr aesedgllly cgenehgrgd fmslaiirrs lqfrfncgtg vgvitsenki
      481 klgnwhsvtl frdgvngwlr mdnnapvtgk sqgqyskitf qtpfyvggap svywlvratg
      541 tnrgfqgcvq slsingkiid mrpwplgkal sgadvgecss gicdeaacin sgtctaskad
      601 syiclcplgf kghhceealt laipqfnesl rsfastpwpl epqnylsfme feltfrpdle
      661 tgvllysydt dskdflsinm vagyvefrfd cgsgtavirs eepvslgqwh elrvsrtakn
      721 gilqvdkqkp vegmaegaft qikcsseifi ggvpsyddvk knsgilrpfs gsiqkiilnd
      781 rtidvkqdft fginlanaah pcvtspcang gtcipkkdsy ecdcplgfdg qhcqkaitea
      841 ieipqfigrs yltydnpdil krvsgtrtnv fmrfkttmke gllmwrgnsp mrpnsdfisl
      901 glqegalifs ynlgsgiasv mvngsfsdgr whrvkavrdg qsgkvtvddy gartgkspgk
      961 mrqlningdl yvggmkeial htnrqylrgl vgcishltls tdyhislved aangknintc
     1021 gtk
//
LOCUS       XP_041328231             154 aa            linear   VRT 06-MAY-2021
DEFINITION  nascent polypeptide-associated complex subunit alpha,
            muscle-specific form-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328231
VERSION     XP_041328231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..154
                     /product="nascent polypeptide-associated complex subunit
                     alpha, muscle-specific form-like"
                     /calculated_mol_wt=16316
     Region          <31..89
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..154
                     /gene="LOC121356164"
                     /coded_by="XM_041472297.1:1..465"
                     /db_xref="GeneID:121356164"
ORIGIN      
        1 mglrplgagh gsappprgaa aparptqsrw rgrgvpcrea pappgslgsp alpagralrt
       61 ppwvpwgtvs plpqrgpcrp ppsapmrpar pqpqrgspqg asafvmgffl ffslrrcgae
      121 mlancwgege arkricfrrl slqpcklatc lllr
//
LOCUS       XP_041328244             218 aa            linear   VRT 06-MAY-2021
DEFINITION  glial cell line-derived neurotrophic factor [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328244
VERSION     XP_041328244.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472310.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="glial cell line-derived neurotrophic factor"
                     /calculated_mol_wt=24494
     Region          122..217
                     /region_name="TGF_beta_GDNF"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in glial cell line-derived neurotrophic
                     factor (GDNF) and similar proteins; cd19380"
                     /db_xref="CDD:381650"
     Site            order(130,132,136..139,149..153,162..164,166..167,
                     169..170,182..188,191,208..210)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381650"
     Site            order(131,144..146,148,193..198,200..204,206)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381650"
     CDS             1..218
                     /gene="GDNF"
                     /coded_by="XM_041472310.1:149..805"
                     /db_xref="GeneID:121356171"
ORIGIN      
        1 mklwdvvavc vvllntvstl plptgktppk gspsvvegpe ddlspisllp pyavhsdsnm
       61 pedypdqfde vvdfiqatik rlrrspdkqt pifsrrernr qnaatniens nkkgrrnqkg
      121 knrgcvltei hlnvtdldlg yetkeelifr ycsgscdaae ttydkilknl trkkklvtdk
      181 vrqaccrpta fdddlsfldd nlvyhilkkh sakrcgcv
//
LOCUS       XP_041328258             259 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 33 [Pyrgilauda ruficollis].
ACCESSION   XP_041328258
VERSION     XP_041328258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472324.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="tetratricopeptide repeat protein 33"
                     /calculated_mol_wt=29001
     Region          59..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(60,63..64,67..68,70,94,97..98,101..102,104..105,128,
                     131..132,135..136,139)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          66..>199
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          92..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          127..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..259
                     /gene="TTC33"
                     /coded_by="XM_041472324.1:67..846"
                     /db_xref="GeneID:121356177"
ORIGIN      
        1 masfgwkrki gekvskatsq qfeaeaadde dlgddddanw vlaakrrkev lledcvrksk
       61 elkdeganla enrryrealv kwdealqltp edatlyemks qvlmslhemf pavhaaemav
      121 qrnprswdaw qtlgraqlgl geialairsf qvslhifpmn pevwkedlsw arklqeqqka
      181 tktesaqala keleqesipd ydfesdeiva vcaaiaekek alsaaktmvi vsasgtvetv
      241 teqdncpatp detlfirar
//
LOCUS       XP_041328267             259 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 33 [Pyrgilauda ruficollis].
ACCESSION   XP_041328267
VERSION     XP_041328267.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472333.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="tetratricopeptide repeat protein 33"
                     /calculated_mol_wt=29001
     Region          59..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(60,63..64,67..68,70,94,97..98,101..102,104..105,128,
                     131..132,135..136,139)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          66..>199
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          92..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          127..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..259
                     /gene="TTC33"
                     /coded_by="XM_041472333.1:145..924"
                     /db_xref="GeneID:121356177"
ORIGIN      
        1 masfgwkrki gekvskatsq qfeaeaadde dlgddddanw vlaakrrkev lledcvrksk
       61 elkdeganla enrryrealv kwdealqltp edatlyemks qvlmslhemf pavhaaemav
      121 qrnprswdaw qtlgraqlgl geialairsf qvslhifpmn pevwkedlsw arklqeqqka
      181 tktesaqala keleqesipd ydfesdeiva vcaaiaekek alsaaktmvi vsasgtvetv
      241 teqdncpatp detlfirar
//
LOCUS       XP_041328277             259 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 33 [Pyrgilauda ruficollis].
ACCESSION   XP_041328277
VERSION     XP_041328277.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472343.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="tetratricopeptide repeat protein 33"
                     /calculated_mol_wt=29001
     Region          59..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(60,63..64,67..68,70,94,97..98,101..102,104..105,128,
                     131..132,135..136,139)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          66..>199
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          92..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          127..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..259
                     /gene="TTC33"
                     /coded_by="XM_041472343.1:122..901"
                     /db_xref="GeneID:121356177"
ORIGIN      
        1 masfgwkrki gekvskatsq qfeaeaadde dlgddddanw vlaakrrkev lledcvrksk
       61 elkdeganla enrryrealv kwdealqltp edatlyemks qvlmslhemf pavhaaemav
      121 qrnprswdaw qtlgraqlgl geialairsf qvslhifpmn pevwkedlsw arklqeqqka
      181 tktesaqala keleqesipd ydfesdeiva vcaaiaekek alsaaktmvi vsasgtvetv
      241 teqdncpatp detlfirar
//
LOCUS       XP_041328284             259 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 33 [Pyrgilauda ruficollis].
ACCESSION   XP_041328284
VERSION     XP_041328284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="tetratricopeptide repeat protein 33"
                     /calculated_mol_wt=29001
     Region          59..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(60,63..64,67..68,70,94,97..98,101..102,104..105,128,
                     131..132,135..136,139)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          66..>199
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          92..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          127..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..259
                     /gene="TTC33"
                     /coded_by="XM_041472350.1:131..910"
                     /db_xref="GeneID:121356177"
ORIGIN      
        1 masfgwkrki gekvskatsq qfeaeaadde dlgddddanw vlaakrrkev lledcvrksk
       61 elkdeganla enrryrealv kwdealqltp edatlyemks qvlmslhemf pavhaaemav
      121 qrnprswdaw qtlgraqlgl geialairsf qvslhifpmn pevwkedlsw arklqeqqka
      181 tktesaqala keleqesipd ydfesdeiva vcaaiaekek alsaaktmvi vsasgtvetv
      241 teqdncpatp detlfirar
//
LOCUS       XP_041328293             259 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 33 [Pyrgilauda ruficollis].
ACCESSION   XP_041328293
VERSION     XP_041328293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472359.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="tetratricopeptide repeat protein 33"
                     /calculated_mol_wt=29001
     Region          59..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(60,63..64,67..68,70,94,97..98,101..102,104..105,128,
                     131..132,135..136,139)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          66..>199
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          92..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          127..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..259
                     /gene="TTC33"
                     /coded_by="XM_041472359.1:86..865"
                     /db_xref="GeneID:121356177"
ORIGIN      
        1 masfgwkrki gekvskatsq qfeaeaadde dlgddddanw vlaakrrkev lledcvrksk
       61 elkdeganla enrryrealv kwdealqltp edatlyemks qvlmslhemf pavhaaemav
      121 qrnprswdaw qtlgraqlgl geialairsf qvslhifpmn pevwkedlsw arklqeqqka
      181 tktesaqala keleqesipd ydfesdeiva vcaaiaekek alsaaktmvi vsasgtvetv
      241 teqdncpatp detlfirar
//
LOCUS       XP_041328303             259 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 33 [Pyrgilauda ruficollis].
ACCESSION   XP_041328303
VERSION     XP_041328303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="tetratricopeptide repeat protein 33"
                     /calculated_mol_wt=29001
     Region          59..87
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(60,63..64,67..68,70,94,97..98,101..102,104..105,128,
                     131..132,135..136,139)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          66..>199
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          92..122
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          127..154
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..259
                     /gene="TTC33"
                     /coded_by="XM_041472369.1:230..1009"
                     /db_xref="GeneID:121356177"
ORIGIN      
        1 masfgwkrki gekvskatsq qfeaeaadde dlgddddanw vlaakrrkev lledcvrksk
       61 elkdeganla enrryrealv kwdealqltp edatlyemks qvlmslhemf pavhaaemav
      121 qrnprswdaw qtlgraqlgl geialairsf qvslhifpmn pevwkedlsw arklqeqqka
      181 tktesaqala keleqesipd ydfesdeiva vcaaiaekek alsaaktmvi vsasgtvetv
      241 teqdncpatp detlfirar
//
LOCUS       XP_041328314             561 aa            linear   VRT 06-MAY-2021
DEFINITION  5'-AMP-activated protein kinase catalytic subunit alpha-1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041328314
VERSION     XP_041328314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..561
                     /product="5'-AMP-activated protein kinase catalytic
                     subunit alpha-1"
                     /calculated_mol_wt=63794
     Region          26..281
                     /region_name="STKc_AMPK_alpha"
                     /note="Catalytic domain of the Alpha subunit of the
                     Serine/Threonine Kinase, AMP-activated protein kinase;
                     cd14079"
                     /db_xref="CDD:270981"
     Site            order(35..39,43,56,58,90,106..109,113,115..116,118,
                     151..152,154,156..157,159,169..170,173,187..191,193,
                     223..226)
                     /site_type="active"
                     /db_xref="CDD:270981"
     Site            order(35..38,43,56,58,90,106..109,113,156..157,159,
                     169..170)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270981"
     Site            order(113,115..116,118,152,154,156,173,187..191,193,
                     223..226)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270981"
     Site            169..191
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270981"
     Site            order(177..182,201..202,204,207,267)
                     /site_type="other"
                     /note="heterotrimer interface [polypeptide binding]"
                     /db_xref="CDD:270981"
     Region          298..362
                     /region_name="UBA_AID_AAPK1"
                     /note="UBA-like autoinhibitory domain (AID) found in
                     vertebrate 5'-AMP-activated protein kinase catalytic
                     subunit alpha-1 (AMPKalpha-1); cd14403"
                     /db_xref="CDD:270586"
     Region          406..559
                     /region_name="AMPKA1_C"
                     /note="C-terminal regulatory domain of 5'-AMP-activated
                     protein kinase (AMPK) alpha 1 catalytic subunit; cd12199"
                     /db_xref="CDD:213384"
     Site            order(406..412,414,419,441..443,463..467,472,475..478,480,
                     545,548..550,552..553,557)
                     /site_type="other"
                     /note="beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:213384"
     Site            order(406,451,453,543..544,546..547,550)
                     /site_type="other"
                     /note="gamma subunit interface [polypeptide binding]"
                     /db_xref="CDD:213384"
     CDS             1..561
                     /gene="PRKAA1"
                     /coded_by="XM_041472380.1:19..1704"
                     /db_xref="GeneID:121356199"
ORIGIN      
        1 mrrlgpclkm aavadkqkhe hgrvkighyi lgdtlgvgtf gkvkvgkhel tghkvavkil
       61 nrqkirsldv vgkirreiqn lklfrhphii klyqvistpt difmvmeyvs ggelfdyick
      121 ngrldekesr rlfqqilsgv dychrhmvvh rdlkpenvll dahmnakiad fglsnmmsdg
      181 eflrtscgsp nyaapevisg rlyagpevdi wssgvilyal lcgtlpfddd hvptlfkkic
      241 dgifytpqyl npsvisllkh mlqvdpmkra tirdirehew fkqdlpkylf pedpsysstm
      301 iddealkevc ekfecteeev lsclysrnhq dplavayhli idnrrimnea kdfylatspp
      361 dsflddhhls rphpervpfl vaeaprprht ldelnpqksk hqgvrrakwh lgirsqsrpn
      421 dimaevcrai kqldyewkvv npyylrvrrk npvtsayskm slqlyqvdsr tylldfrsid
      481 deiaeaksgt atpqrsgsvs nykscqkdsd adaqgksadt sltssvnssl dsstadvtpr
      541 pgshtieffe mcanlikila q
//
LOCUS       XP_041328325             950 aa            linear   VRT 06-MAY-2021
DEFINITION  complement component C6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328325
VERSION     XP_041328325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472391.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..950
                     /product="complement component C6"
                     /calculated_mol_wt=105681
     Region          43..93
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; cl46269"
                     /db_xref="CDD:480609"
     Region          97..143
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; cl46269"
                     /db_xref="CDD:480609"
     Region          157..188
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(159,167,178..179)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(171,174,178,184..185)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            181..185
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          309..528
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     Region          583..626
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          <648..>780
                     /region_name="PHA02831"
                     /note="EEV host range protein; Provisional"
                     /db_xref="CDD:165176"
     Region          784..853
                     /region_name="FIMAC"
                     /note="factor I membrane attack complex; smart00057"
                     /db_xref="CDD:214493"
     Region          878..949
                     /region_name="FIMAC"
                     /note="factor I membrane attack complex; smart00057"
                     /db_xref="CDD:214493"
     CDS             1..950
                     /gene="C6"
                     /coded_by="XM_041472391.1:1..2853"
                     /db_xref="GeneID:121356206"
ORIGIN      
        1 mslqhtltfq mdtfatgmtv pvllvllslv igssqgcyce hypwgswsac sqtcnfgtqt
       61 rhrqirmdey ysqnfcdqlc kkqesrpcnq qtcpincqlg dfgpwsecdp cvkkqfrtrp
      121 llrpsqfggq acteplvdsr pcfpaklcni vevdcknkfr cesgrciskt lecngendcg
      181 dnsderncrs kktvcnrkye sipgvqligs gfhilsgesr gevlgnsfng grcttvkhne
      241 trklyrvpan leavsfqvtd eeddvtsdfy kdltplsesa sgssssthsg khssgipflf
      301 srktrvqvts sssfkkaiea syeknsnfir vhkvisvanf tmkqsdlqls dvflkalnql
      361 pleynyalys rifddfgthy ytsgkmggsy dilyqyssee lqnsglsiee stecvrteti
      421 rrvffikkkk vstkcttnrm tvkhegsile saersislvk ggrseyaaal awekkgafpg
      481 htvfrdwles tkdnpvvidf evspivdlvr nvpcavtkrr hlrralreqa ggldacrcap
      541 cpgggrpvla gtrclclcpp gthgphcatr apghapvavd grwgcwsews pcdasfkkrr
      601 trecnnpspm nggkpceger eeeedcyisv ftdrgapcin ddeakreenv ligepasgcs
      661 rpeppeygfi rneknqyavg eeveiacvsg hslsgyqylr clpdqtwtqq hiecqpsvcl
      721 rppisdsvti spykqqysig etmklscqag fivtghakyt cgkdlswipp ilrsitcekd
      781 vltkirgics pgqkqvgsqc vcmspeedcg hysedicvlh avseqnvtkp scqysaemcl
      841 gvqsfhflha gpchgnsnld waieraklst nsvkkvpcgy dtcydwedcq etqtqcsclm
      901 pyqcpkgeir phciqmettg rrrtvshcml aamkcagikl qvleqgsclp
//
LOCUS       XP_041328337            3212 aa            linear   VRT 06-MAY-2021
DEFINITION  ciliogenesis and planar polarity effector 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328337
VERSION     XP_041328337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472403.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3212
                     /product="ciliogenesis and planar polarity effector 1
                     isoform X1"
                     /calculated_mol_wt=361712
     Region          2874..3211
                     /region_name="Joubert"
                     /note="Joubert syndrome-associated; pfam15392"
                     /db_xref="CDD:464699"
     CDS             1..3212
                     /gene="CPLANE1"
                     /coded_by="XM_041472403.1:189..9827"
                     /db_xref="GeneID:121356212"
ORIGIN      
        1 meikldvlis tcikqrkpwp riswvgqeke avflldgkhi neinlasgkt kkkipslqsl
       61 lknvvvltts gnaawlagil ttgelflwnk dqdclkivpa ieeskkvvag aqeclmrlyl
      121 yvsgdgrkvl lttptacafl westehenta sgktslsgrw tqvltdesvi lpsteekeig
      181 vdaafiqnev lgdcclcsfv fysgeclmlt flilrwhent fknisslpyq iqwvqqtcsl
      241 vnlvpqcvsv ksrgallcaf ardglllava vnqtdpkatq vlflntlnfv tvsgslkgcs
      301 skssmtpsrf irsywvgdms wtpdslflac mlkrgclvll tcmgelltli asgcsvefgp
      361 aqfipfhpli tyrqhhsccr dssqslgssd sdrdllkqrf svashprlpy livsdgymit
      421 llrfpnnfsp sgfmrsllld saqqlenirq nlmnfkckgr srylrsllsl kasllkqvqn
      481 qssifstipr fleedttemn ektmdlldle eesdngkqfy nspssfynqr iyssvgkade
      541 gclefasmfd tihaeddiee kdksalelys iqknllgawq igisknieek dallnytvnc
      601 iihffsiiqf vkctllnqda flnkslkttq wmhfvlkyfq qcltvlywhs rasvtghvak
      661 ltfetlklmf iqqqdqlfsk nllacfcllk mvshtlsrvc vlqyenffas pdsntlveld
      721 sltvpvflvl denttqqfss lksllrecpq vihdaktekr ltvlwqllyk kvvwyqvqlk
      781 rkvnksaeev svvslllshi qaaiqssgvt leqhmkinsv sgeeqfllgs yresvdiwkr
      841 slcelktngg kracflqrry ylailfchly qynvceaqgl cdhlvreilr rsqlstsqve
      901 efsdikyvqh elwmvtsiht dtamaviqsm arfmaayftk qllyifpphn vdilhplhik
      961 qdspprvipl qhclvtravr dqklssvwtv eyaldlffig glipeavwla htlgdwklsv
     1021 siglayqlyc qnseelsrmn kpechlplsl lpmqtfrekl qcllgqpvts etsghikykk
     1081 ftdpieeeda dvlyssiqel lkaavmadvd ilsetfqllm dsakdlcrkf yglvpvglcl
     1141 papplycpqp aslseedsdd illktekevr qkvsgvlqri illfraahcs csaaqwyitq
     1201 lkwarkvmqk irmkgslpll spfpetllcy cnfrtalygs tssgahqfdd itckilgwfr
     1261 efcalcwmfh vreklsdncr ryqtaredin nikdpnkngy daytvehcln avewacrmlp
     1321 fcrfmnveel vqdvilsllg elppikkvae vfvkafpnpe dvrvplrdky hgllqrlrhs
     1381 takegpesee mmsiqaaeev rkkalrrvlk nigpievniw epveeaasnd eehcydrfsl
     1441 gtslststlt dvgnpqvynd adtpdtlsda lfteetrpqt psfprenelq rqreignknt
     1501 thtikapnck tkhkdkvcrr drlnqhnlpv vgaweferdd deyvrflelf lsyvlerdli
     1561 kygdlgipfl tsfsgllreh elnslffdvh ttlkrrqnkt rspsvfrags cytvtlascd
     1621 peevpacnen knilekptiv qsvgqtteps vcnlkkrlke glfglkykpi yraqtdnqgv
     1681 svaqasqtfr nrasstlqtq aipkyiyktl dvvgivpaee lpidlmgkls niskllewmi
     1741 rwsdkrlpcg snkqdcleet lpmihlktss aavltsfwll eqlygdrsqt rsvkckhpdd
     1801 qylkeiasls eaqsraeees cmdegsstva nspldvqivq vcdnlresdl gmsakskyfy
     1861 kkkinhgnns vshitedlne vgpfvqqeld vtseqeffee pyetskssns svkirpvehq
     1921 reqgavpwdp tkqlpeeakv csskvkvais avdsaqedpn leetkeekae qniadavsds
     1981 qpsetavstm sslasytsvr akqevkeevp reekpstset vrqmlqdemf klvqlqqinf
     2041 mslmqlvqss ftnvpnvqqv lqqhrlvhla gsqpahtaes naspkmqeet gktgqessvf
     2101 qprrsvedes nngqikncvd mstslalfes nsketelmsp yqdlhssvpt kplhllapss
     2161 giqkkvklip vekessysng fplltlessy hvkpaflhpt empsafarlp svprvawsss
     2221 dslwnhqssy aprkskaeed fhrnscnpei srqkykeker waetvhegpp khlnsdqceg
     2281 qqedspqpqf penvnvfkap ttqnlaaipl lrlqldpvpr vppavrqpit ttlipikpaa
     2341 kdadsretqw dagisllqin lrqkkkapnl iplgdliafe qchkhhsvps ssfgqdqtks
     2401 iqllrtdvep felrdvqnkr kskkrrskkq lkekedkkkl svsfrpddsi isisdtavas
     2461 esetgdhkpk stsyvqdgfp vsmdimdkas itsadlhyla svgkktaetq dastntnpvl
     2521 ksyedhgtsg gnevskvqen elvtsvpvse ssssseillp dmylnlsfpt evnekplpsl
     2581 lsdapdlhkr eyisvvdied sdilsnlplk seseeeraae qekklevpst tklhdtaasv
     2641 tnavppealh kqdnhqknvs dklqkkdksd svtdivtwnt ahedggtvps sglppkliek
     2701 eyfstrqkem dmqlrvleni venmeqdfrn skmlvklied femaadsdlg ahpavsevag
     2761 vigaesehhl tgmifedvid dqkeslnlky papssttvda hssassalas kfpsglksps
     2821 dgeislgeea vlflprqpyc ssvassefqa sseyldssss hicrdlcpgs ledplqiagp
     2881 sdvtdigndr vvesdtslle lsfartqakk tfrvldsasg hsqrtekerk eiqtwmkrkq
     2941 kermreylkk ldeqrqkehh pfslrknvhh nptskdirvf qkkkeekdka llsehhrirv
     3001 sqalslmnem lsetvaspas dhrmlsstrs aqaysrrkva sstgahlssp vlaersrtaa
     3061 kpgfgqkvqh ftptlgltqs rgnacmllqk stsrrrlrna tngpvksrhs aecrvsrgsi
     3121 qkppqvatav qtegvdpdtd rdvvspwtmp ddiqrilqdt hdsmfqasav hsmsfsplss
     3181 intdsvsest gsilskldwn aveamiadve dt
//
LOCUS       XP_041328346            3176 aa            linear   VRT 06-MAY-2021
DEFINITION  ciliogenesis and planar polarity effector 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328346
VERSION     XP_041328346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3176
                     /product="ciliogenesis and planar polarity effector 1
                     isoform X2"
                     /calculated_mol_wt=357816
     Region          2838..3175
                     /region_name="Joubert"
                     /note="Joubert syndrome-associated; pfam15392"
                     /db_xref="CDD:464699"
     CDS             1..3176
                     /gene="CPLANE1"
                     /coded_by="XM_041472412.1:189..9719"
                     /db_xref="GeneID:121356212"
ORIGIN      
        1 meikldvlis tcikqrkpwp riswvgqeke avflldgkhi neinlasgkt kkkipslqsl
       61 lknvvvltts gnaawlagil ttgelflwnk dqdclkivpa ieeskkvvag aqeclmrlyl
      121 yvsgdgrkvl lttptacafl westehenta sgktslsgrw tqvltdesvi lpsteekeig
      181 vdaafiqnev lgdcclcsfv fysgeclmlt flilrwhent fknisslpyq iqwvqqtcsl
      241 vnlvpqcvsv ksrgallcaf ardglllava vnqtdpkatq vlflntlnfv tvsgslkgcs
      301 skssmtpsrf irsywvgdms wtpdslflac mlkrgclvll tcmgelltli asgcsvefgp
      361 aqfipfhpli tyrqhhsccr dssqslgssd sdrdllkqrf svashprlpy livsdgymit
      421 llrfpnnfsp sgfmrsllld saqqlenirq nlmnfkckgr srylrsllsl kasllkqvqn
      481 qssifstipr fleedttemn ektmdlldle eesdngkqfy nspssfynqr iyssvgkade
      541 gclefasmfd tihaeddiee kdksalelys iqknllgawq igisknieek dallnytvnc
      601 iihffsiiqf vkctllnqda flnkslkttq wmhfvlkyfq qcltvlywhs rasvtghvak
      661 ltfetlklmf iqqqdqlfsk nllacfcllk mvshtlsrvc vlqyenffas pdsntlveld
      721 sltvpvflvl denttqqfss lksllrecpq vihdaktekr ltvlwqllyk kvvwyqvqlk
      781 rkvnksaeev svvslllshi qaaiqssgvt leqhmkinsv sgeeqfllgs yresvdiwkr
      841 slcelktngg kracflqrry ylailfchly qynvceaqgl cdhlvreilr rsqlstsqve
      901 efsdikyvqh elwmvtsiht dtamaviqsm arfmaayftk qllyifpphn vdilhplhik
      961 qdspprvipl qhclvtravr dqklssvwtv eyaldlffig glipeavwla htlgdwklsv
     1021 siglayqlyc qnseelsrmn kpechlplsl lpmqtfrekl qcllgqpvts etsghikykk
     1081 ftdpieeeda dvlyssiqel lkaavmadvd ilsetfqllm dsakdlcrkf yglvpvglcl
     1141 papplycpqp aslseedsdd illktekevr qkvsgvlqri illfraahcs csaaqwyitq
     1201 lkwarkvmqk irmkgslpll spfpetllcy cnfrtalygs tssgahqfdd itckilgwfr
     1261 efcalcwmfh vreklsdncr ryqtaredin nikdpnkngy daytvehcln avewacrmlp
     1321 fcrfmnveel vqdvilsllg elppikkvae vfvkafpnpe dvrvplrdky hgllqrlrhs
     1381 takegpesee mmsiqaaeev rkkalrrvlk nigpievniw epveeaasnd eehcydrfsl
     1441 gtslststlt dvgnpqvynd adtpdtlsda lfteetrpqt psfprenelq rqreignknt
     1501 thtikapnck tkhkdkvcrr drlnqhnlpv vgaweferdd deyvrflelf lsyvlerdli
     1561 kygdlgipfl tsfsgllreh elnslffdvh ttlkrrqnkt rspsvfrags cytvtlascd
     1621 peevpacnen knilekptiv qsvgqtteps vcnlkkrlke glfglkykpi yraqtdnqgv
     1681 svaqasqtfr nrasstlqtq aipkyiyktl dvvgivpaee lpidlmgkls niskllewmi
     1741 rwsdkrlpcg snkqdcleet lpmihlktss aavltsfwll eqlygdrsqt rsvkckhpdd
     1801 qylkeiasls eaqsraeees cmdegsstva nspldvqivq vcdnlresdl gmsakskyfy
     1861 kkkinhgnns vshitedlne vgpfvqqeld vtseqeffee pyetskssns svkirpvehq
     1921 reqgavpwdp tkqlpeeakv csskvkqvai savdsaqedp nleetkeeka eqnisadavs
     1981 dsqpsetavs tmsslasyts vrakqevkee vpreekpsts etvrqmlqde mfklvqlqqi
     2041 nfmslmqlvq ssftnvpnvq qvlqqhrlvh lagsqpahta esnaspkmqe etgktgqess
     2101 vfqprrsved esnngqiknc vdmstslalf esnsketelm spyqdlhssv ptkplhllap
     2161 ssgiqkkvkl ipvekessys ngfplltles syhvkpaflh ptempsafar lpsvprvaws
     2221 ssdslwnhqs syaprkskae edfhrnscnp eisrqkykek erwaetvheg ppkhlnsdqc
     2281 egqqedspqp qfpenvnvfk apttqnlaai pllrlqldpv prvppavrqp itttlipikp
     2341 aakdadsret qwdagisllq inlrqkkkap nliplgdlia feqchkhhsv psssfgqdqt
     2401 ksiqllrtdv epfelrdvqn krkskkrrsk kqlkekedkk klsvsfrpdd siisisdtav
     2461 asesetgdhk pkstsyvqdg fpvsmdimdk asitsadlhy lasvgkktae tqdastntnp
     2521 vlksyedhgt sggnevskvq enelvtsvpv sessssseil lpdmylnlsf ptevnekplp
     2581 sllsdapdlh kreyisvvdi edsdilsnlp lkseseeera aeqekklevp sttklhdtaa
     2641 svtnavppea lhkqdnhqkn vsdklqkkdk sdsvtdivtw ntahedggtv pssglppkli
     2701 ekeyfstrqk emdmqlrvle nivenmeqdf rnskmlvkli edfemaadsd lgahpavsev
     2761 agvigaeseh hltgmifedv iddqkeslnl kypapssttv dahssassal askfpsglks
     2821 psgshicrdl cpgsledplq iagpsdvtdi gndrvvesdt sllelsfart qakktfrvld
     2881 sasghsqrte kerkeiqtwm krkqkermre ylkkldeqrq kehhpfslrk nvhhnptskd
     2941 irvfqkkkee kdkallsehh rirvsqalsl mnemlsetva spasdhrmls strsaqaysr
     3001 rkvasstgah lsspvlaers rtaakpgfgq kvqhftptlg ltqsrgnacm llqkstsrrr
     3061 lrnatngpvk srhsaecrvs rgsiqkppqv atavqtegvd pdtdrdvvsp wtmpddiqri
     3121 lqdthdsmfq asavhsmsfs plssintdsv sestgsilsk ldwnaveami advedt
//
LOCUS       XP_041328359             322 aa            linear   VRT 06-MAY-2021
DEFINITION  PI-PLC X domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041328359
VERSION     XP_041328359.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472425.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..322
                     /product="PI-PLC X domain-containing protein 3"
                     /calculated_mol_wt=36080
     Region          19..311
                     /region_name="PI-PLCXD1c"
                     /note="Catalytic domain of phosphatidylinositol-specific
                     phospholipase C, X domain containing 1; cd08616"
                     /db_xref="CDD:176555"
     Site            order(37,98,114,144,195,214,216,296)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176555"
     Site            order(37,114)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176555"
     CDS             1..322
                     /gene="PLCXD3"
                     /coded_by="XM_041472425.1:40..1008"
                     /db_xref="GeneID:121356225"
ORIGIN      
        1 massqgknel lfadwmaalp gslhstpltn laipgshdsf sfyideaspv gpeqpetvqn
       61 fvsvfgtvak klmrkwlatq tmnftsqlga giryfdlris tkprdpdnel yfahglfsak
      121 vkegleeina fltehpkevv fldfnhfygm qkchheklvq mlkdtygnkm cpaifahevs
      181 lqylwekehq vlvfyhspva vevaflwpgq mmpapwantt dtekliqflq tsiterrkkg
      241 sffisqvvlt pkastvvkgv asglretite ralpammewv rtqkagesgv niitadfvel
      301 gdfistvikl nysldegedd tt
//
LOCUS       XP_041328381             945 aa            linear   VRT 06-MAY-2021
DEFINITION  oncostatin-M-specific receptor subunit beta-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328381
VERSION     XP_041328381.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472447.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..945
                     /product="oncostatin-M-specific receptor subunit
                     beta-like"
                     /calculated_mol_wt=107547
     Region          34..124
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          322..413
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(322,383,401)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(402..403,405..406)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          619..723
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(712..713,715..716)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..945
                     /gene="LOC121356235"
                     /coded_by="XM_041472447.1:165..3002"
                     /db_xref="GeneID:121356235"
ORIGIN      
        1 mmnhfmilav llplrtcytk ysqqepdvfp vmylnvskdl dlqqllvewd vaksahdael
       61 aisfeiqvrr inttvrtgfq nvtldklgkp lhwawdsdip lecmshdvri rskaetskiw
      121 sqwslwetlp gldtsnrigp qifpkekila egsnitlcci ggkgqtikef tvyptvyvnn
      181 tvnhtnsqvr flpvnnlshe kgsnihvycy dednrsheaa ffvgkppdap kdfscqtqdm
      241 krvtcswree etylyginsp lytlsktssq ktalceascs krcsctwdig qqwiwnvtvt
      301 venplgkkta tdvfdvkhrm yptapfqvwe dctdtemtlh wnyenngiel fcqtevvqpd
      361 gkvelhngsv adsrrvtvrg lqpyteytar vhcgaakhfw rwsewsqplt trtkegtpsg
      421 kldiwreitp vlrgrnvtlf wketpnfqan grilsyevtw ekiedgsqpe risissvyns
      481 trifidnhsy risimannsv nfslpsvlii sratdnstee lkegqvngtg dgifiswepr
      541 siydsyiidw cnfprlqpcd lqwkrfgpnt ssavissaaf vpgvrykfhi ygsvanrasl
      601 lekkigylre lppcldpivr kvdltydsvt lswdsyltne sepgfvrgyh vyvspiqgnc
      661 nlkgskkhil sdeselckyt ienpeekryt vkhlmpntky kivvkaftgg getpivnfry
      721 idtpynsnml yfvfllvivp tlvaaichwk mkwvkewccp vipspnkskv lsfkefkids
      781 ekvlkindcl pdmlamdsna eahklhpvtw splsstpted kidghnsswi ypsdnvagdf
      841 lptpapqtht cfenfayssp lgaepdpyqi petleagktn qavvlyqpqc yidifhedaa
      901 sttretgerk nslkyisqtd acwlgggfdv lsssesiqcl athyk
//
LOCUS       XP_041328391             945 aa            linear   VRT 06-MAY-2021
DEFINITION  oncostatin-M-specific receptor subunit beta-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328391
VERSION     XP_041328391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..945
                     /product="oncostatin-M-specific receptor subunit
                     beta-like"
                     /calculated_mol_wt=107547
     Region          34..124
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          322..413
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(322,383,401)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(402..403,405..406)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          619..723
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(712..713,715..716)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..945
                     /gene="LOC121356235"
                     /coded_by="XM_041472457.1:232..3069"
                     /db_xref="GeneID:121356235"
ORIGIN      
        1 mmnhfmilav llplrtcytk ysqqepdvfp vmylnvskdl dlqqllvewd vaksahdael
       61 aisfeiqvrr inttvrtgfq nvtldklgkp lhwawdsdip lecmshdvri rskaetskiw
      121 sqwslwetlp gldtsnrigp qifpkekila egsnitlcci ggkgqtikef tvyptvyvnn
      181 tvnhtnsqvr flpvnnlshe kgsnihvycy dednrsheaa ffvgkppdap kdfscqtqdm
      241 krvtcswree etylyginsp lytlsktssq ktalceascs krcsctwdig qqwiwnvtvt
      301 venplgkkta tdvfdvkhrm yptapfqvwe dctdtemtlh wnyenngiel fcqtevvqpd
      361 gkvelhngsv adsrrvtvrg lqpyteytar vhcgaakhfw rwsewsqplt trtkegtpsg
      421 kldiwreitp vlrgrnvtlf wketpnfqan grilsyevtw ekiedgsqpe risissvyns
      481 trifidnhsy risimannsv nfslpsvlii sratdnstee lkegqvngtg dgifiswepr
      541 siydsyiidw cnfprlqpcd lqwkrfgpnt ssavissaaf vpgvrykfhi ygsvanrasl
      601 lekkigylre lppcldpivr kvdltydsvt lswdsyltne sepgfvrgyh vyvspiqgnc
      661 nlkgskkhil sdeselckyt ienpeekryt vkhlmpntky kivvkaftgg getpivnfry
      721 idtpynsnml yfvfllvivp tlvaaichwk mkwvkewccp vipspnkskv lsfkefkids
      781 ekvlkindcl pdmlamdsna eahklhpvtw splsstpted kidghnsswi ypsdnvagdf
      841 lptpapqtht cfenfayssp lgaepdpyqi petleagktn qavvlyqpqc yidifhedaa
      901 sttretgerk nslkyisqtd acwlgggfdv lsssesiqcl athyk
//
LOCUS       XP_041328401             945 aa            linear   VRT 06-MAY-2021
DEFINITION  oncostatin-M-specific receptor subunit beta-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328401
VERSION     XP_041328401.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472467.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..945
                     /product="oncostatin-M-specific receptor subunit
                     beta-like"
                     /calculated_mol_wt=107547
     Region          34..124
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          322..413
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(322,383,401)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(402..403,405..406)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          619..723
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(712..713,715..716)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..945
                     /gene="LOC121356235"
                     /coded_by="XM_041472467.1:152..2989"
                     /db_xref="GeneID:121356235"
ORIGIN      
        1 mmnhfmilav llplrtcytk ysqqepdvfp vmylnvskdl dlqqllvewd vaksahdael
       61 aisfeiqvrr inttvrtgfq nvtldklgkp lhwawdsdip lecmshdvri rskaetskiw
      121 sqwslwetlp gldtsnrigp qifpkekila egsnitlcci ggkgqtikef tvyptvyvnn
      181 tvnhtnsqvr flpvnnlshe kgsnihvycy dednrsheaa ffvgkppdap kdfscqtqdm
      241 krvtcswree etylyginsp lytlsktssq ktalceascs krcsctwdig qqwiwnvtvt
      301 venplgkkta tdvfdvkhrm yptapfqvwe dctdtemtlh wnyenngiel fcqtevvqpd
      361 gkvelhngsv adsrrvtvrg lqpyteytar vhcgaakhfw rwsewsqplt trtkegtpsg
      421 kldiwreitp vlrgrnvtlf wketpnfqan grilsyevtw ekiedgsqpe risissvyns
      481 trifidnhsy risimannsv nfslpsvlii sratdnstee lkegqvngtg dgifiswepr
      541 siydsyiidw cnfprlqpcd lqwkrfgpnt ssavissaaf vpgvrykfhi ygsvanrasl
      601 lekkigylre lppcldpivr kvdltydsvt lswdsyltne sepgfvrgyh vyvspiqgnc
      661 nlkgskkhil sdeselckyt ienpeekryt vkhlmpntky kivvkaftgg getpivnfry
      721 idtpynsnml yfvfllvivp tlvaaichwk mkwvkewccp vipspnkskv lsfkefkids
      781 ekvlkindcl pdmlamdsna eahklhpvtw splsstpted kidghnsswi ypsdnvagdf
      841 lptpapqtht cfenfayssp lgaepdpyqi petleagktn qavvlyqpqc yidifhedaa
      901 sttretgerk nslkyisqtd acwlgggfdv lsssesiqcl athyk
//
LOCUS       XP_041328412             829 aa            linear   VRT 06-MAY-2021
DEFINITION  complement component C7 [Pyrgilauda ruficollis].
ACCESSION   XP_041328412
VERSION     XP_041328412.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472478.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..829
                     /product="complement component C7"
                     /calculated_mol_wt=92674
     Region          29..79
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          86..118
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(88,96,107..108)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(100,103,107,114..115)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            111..115
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          211..430
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     Region          <553..665
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          685..747
                     /region_name="FIMAC"
                     /note="factor I membrane attack complex; smart00057"
                     /db_xref="CDD:214493"
     Region          775..824
                     /region_name="Kazal_3"
                     /note="Kazal-type serine protease inhibitor domain;
                     pfam18434"
                     /db_xref="CDD:436499"
     CDS             1..829
                     /gene="C7"
                     /coded_by="XM_041472478.1:150..2639"
                     /db_xref="GeneID:121356249"
ORIGIN      
        1 mkvlriflll eisgffpifs spslihcrwn sfgpwsecng ctqkqirrrt vavygqyggn
       61 pcsghtfetr pctptrgcpt edgcgdrfrc fsgqcisrsl vcngdqdced dgadedqcee
      121 rktvcdidkt plnseltgag fdiitgetkg rvihtksfgg qcrkvfsgdr reyyrlsesv
      181 laynfqvkvq ndfsyeffns twsymkhveq yensnkykqt enknlqkskq lmvventvev
      241 aqfinnrpdf ltlaesfwke lfnlpviyey siyrrliehf gthflhsgsl gghykvifym
      301 dtdkmkaegv sitdlykcts sgwnalivkk rkkectklde llltssgstg nkikgdpyie
      361 ggspgavagl syldldnpag nsrmytlwaa svtdyprvik kkltplyelv kevpcssvkk
      421 yylkqaieey maendpckcq pcqnggeaav egtqcvcyck pytfgaacel gtlvqdqpgv
      481 vdghwscwss wspcsggrks rsrtcnnpsp rgggkaclgd qherkacede elqhlrliep
      541 hcfdlsinpt efcsppplle ngfvqnaens ypvgknivya ckhgyslvgd pvakcrsnlq
      601 wqvgerycqe tacllpeleg glqgepwkpv yeigeritls cphgmhlega hsilcepslk
      661 wspdmktiqc krpvpsvkte vtetkcqpwe kvyqsqcvck mpyecgpsld tcatdqrtkr
      721 ntpltvckmh alecmgrkys ltnvenckvp qaaeipcgsc rswekcnvps ntcvcdedgl
      781 ceeggaqvca evsgsaarrt mtecevgllr crgetvtlvs irpcdtqsk
//
LOCUS       XP_041328424            1332 aa            linear   VRT 06-MAY-2021
DEFINITION  nipped-B-like protein, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328424
VERSION     XP_041328424.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472490.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..1332
                     /product="nipped-B-like protein"
     Region          9..995
                     /region_name="SCC2"
                     /note="Sister chromatid cohesion protein 2 and homologs;
                     cd23958"
                     /db_xref="CDD:467937"
     Region          337..365
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          374..400
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..1332
                     /gene="LOC121356258"
                     /coded_by="XM_041472490.1:<1..4000"
                     /codon_start=2
                     /db_xref="GeneID:121356258"
ORIGIN      
        1 lnssdtdgep myiqmvtalv lqliqcvvhl pstekdsnse eesnkkvdqd vlmtnsyeta
       61 mrtaqnflsi flkkcgskqg eedyrplfen fiqdllstvn kpewpaaell lsllgrllvh
      121 qfsnkstema lrvasldylg tvaarlrkda vtskmdqgsi arilkqvsgg edeiqqlqka
      181 lldyldente idaslvfsrk fyiaqwfrdt tmetekaiks qkdedssegt hhakdvettg
      241 qimhraesrk kflrsiikta psqfstlkmn sdtvdyedac livrylasmr pfaqsfdiyl
      301 tqilrvlgen aiavrtkamk clsevvavdp silarldmqr gvhgrlmdns tsvreaavel
      361 lgrfvlcrpq laeqyydmli erildtgisv rkrvikilrd icieqptfpk itemcvkmir
      421 rvndeegikk lvnetfqklw ftptlhhdke amtrkilnit dvvsltlnhf lfhllqllks
      481 eedasykpvk kactqlvdnl vehilkyees lsdsdnksvn sgrlvacitt lflfskirpq
      541 lmvkhamtmq pylttkcstq ndfmvicnva kilelvvplm ehpsetflat ieedlmklii
      601 kygmtvvqhc vsclgavvnk vtqnykfvwa cfnryygals klksqhqeda nstiltankp
      661 allrslftvg alcrhfdfdq edfkgnskvn ikdkvlellm yftkhsdeev qtkaiiglgf
      721 afiqhpslmf eqevktlyns ilsdkncsvn lkiqvlknlq tylqeedtrm qqadrdwkkv
      781 akqedlkemg dissgmsssi mqlylkqvle affhnqssvr hfalnvialt lnqglihpvq
      841 cvpyliamgt dpepsmrnka dqqlveidkk yagfihmkav agmkmsyqvq qaintcpqdp
      901 vrgfrhdess nalcshlysm irgnrqhrra flisllnlfd dtaktevnml lyiadnlacf
      961 pyqtqeeplf imhhiditls vsgsnllqsf kesmvkdkkk erkpssdeet esdsnsgses
     1021 kseeeaskpr rlrkrvdsds dsdeendina vmkclpensa pliefanvsq gillllmlkq
     1081 hlknlcgfsd skiqkyspse sakvydkain rktgvhfhpk qtldflrsdm anskiteevk
     1141 rsivkqyldf kllmehldpd eeeedgevsa stnarnkait sllgggspkn naaeteddes
     1201 dgedrgggts gslrrskrns dstelaaqmn esvdvmdvia iccpkykdrp qiarvvqkts
     1261 ngfsvqwmag sysgswteak rrdgrklvpw vdtikesdii ykkialtsan kltnkvvqtl
     1321 rslyaakdgt ss
//
LOCUS       XP_041328435             347 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0600 protein C5orf51 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041328435
VERSION     XP_041328435.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472501.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="UPF0600 protein C5orf51 homolog"
                     /calculated_mol_wt=38506
     Region          90..342
                     /region_name="DUF5561"
                     /note="Family of unknown function (DUF5561); pfam17716"
                     /db_xref="CDD:407593"
     CDS             1..347
                     /gene="CUNH5orf51"
                     /coded_by="XM_041472501.1:1..1044"
                     /db_xref="GeneID:121356268"
ORIGIN      
        1 mrggevwvsp ektdgalqtp hlsvmkelsr phkprtavpa vnarraggpa vsrrcpggvg
       61 grvsgpgraa atppgpapgr ehcvlpsdtf lakgsanldk lkdlckegke hpstlfqlyt
      121 qavldityfe enqlvdedfp eesalqklke lisvlseped lvrecgikep inilgaelle
      181 clywrkgall ymychtaker sewlqeniat fkkclndgvq ylmkmlsfrc plqldedisl
      241 qdkdtarlls egifsdthll ammysgemcy wrlkhcgegk qeslesidpv snsdlgsrsq
      301 sisldfqetg rlmltkyvav cegplkgqgw ntttakqmlh yflkshd
//
LOCUS       XP_041328448             595 aa            linear   VRT 06-MAY-2021
DEFINITION  complement component C9 [Pyrgilauda ruficollis].
ACCESSION   XP_041328448
VERSION     XP_041328448.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472514.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..595
                     /product="complement component C9"
                     /calculated_mol_wt=66841
     Region          50..99
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          109..139
                     /region_name="Ldl_recept_a"
                     /note="Low-density lipoprotein receptor domain class A;
                     pfam00057"
                     /db_xref="CDD:395011"
     Site            order(110,118,129..130)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(122,125,129,135..136)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            132..136
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          273..495
                     /region_name="MACPF"
                     /note="MAC/Perforin domain; pfam01823"
                     /db_xref="CDD:460349"
     Region          549..595
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     CDS             1..595
                     /gene="C9"
                     /coded_by="XM_041472514.1:1..1788"
                     /db_xref="GeneID:121356277"
ORIGIN      
        1 mhvilqliai lcnaetvati wqesrsssek afhrgtreln apspidcklg swsawgpcdp
       61 ctnqrfrsrr ierfgqfggk aclealgdtq tcktskacpe epepdcgtdf qcssgrcikr
      121 rlvcnvdndc gdysdeddce seprspcrnh didvsevgrt aghginvlgm qpvaspfdnd
      181 ffnglcervr dgntrtyyrk pwnvavltyd tkadktfssv yyhdrvkmlq evyiekqkyf
      241 svdaslkytp tdgsnknase gnfkydyrkn ytfgsilqsy ternqtflhv kgqiqlgrfq
      301 irsrdvrltd sflddlkflp aeydkgeyfk fledygthya vsgavggkye lvyvldnyvm
      361 sqlgitvedv kkclgyhlga niayeniqan fnvdsgkcen ihrmdksemn dnaviddvls
      421 lveggkidfs vkikemllrg aktvdvedyi ewakslvdap vviqqrpspi htlvpvklrd
      481 aylkkqnler aiedyiteys vckcepckng gtlvlvdgvc tclcssyfkg iacqipkstl
      541 vkvvtdggws cwtawstcin gestrtrqcn npapgpdgrp cqgesiekrp ceegk
//
LOCUS       XP_041328457             732 aa            linear   VRT 06-MAY-2021
DEFINITION  disabled homolog 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041328457
VERSION     XP_041328457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="disabled homolog 2 isoform X1"
                     /calculated_mol_wt=79411
     Region          36..173
                     /region_name="PTB_Dab"
                     /note="Disabled (Dab) Phosphotyrosine-binding domain;
                     cd01215"
                     /db_xref="CDD:269926"
     Site            order(54,88,90..91,133,151)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269926"
     Site            order(65,119..123,140,160,163..164,167)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269926"
     Region          <404..605
                     /region_name="PPE"
                     /note="PPE-repeat protein [Function unknown]; COG5651"
                     /db_xref="CDD:444372"
     CDS             1..732
                     /gene="DAB2"
                     /coded_by="XM_041472523.1:179..2377"
                     /db_xref="GeneID:121356284"
ORIGIN      
        1 msteaetaat nsqpeqqapp kaqsskkekk kgpektdesl larfkgdgvk ykakligidd
       61 vpeargdkms qdsmmklkgm aaaarsqgqh kqkiwvnisl sgikiidekt gviehehpvn
      121 kisfiardvt dnrafgyvcg gegqhqffai ktaqqaeplv sdlkdlfqli ynmkkkeeee
      181 kknndgeelp adqadkmkpg vdqmdlfgdm stppdmsspt eakeillvdf nseietkqtf
      241 akedlflngi taslpqpkaq ppflpensfs tnlsffptpn pdpfsddpft qpvqsalssf
      301 dslksdqkks pttltsggng dpngdtdyfd kqfdqisnrt gkqealtcqw pleskspaar
      361 ipnviperer ngfpeaqtnl flegaskgts lqngvkldse nniqltphep itispppqst
      421 kpgrgrrsvk tasddlfssd ffvpstesls lssgaqagas ltnpldlftk ssttasplaa
      481 lgglpvtssp wtpqtvsftq atsvfhgsmm paqspgftqp lvfgtqtvpg wnqsssfgat
      541 ptqssglwsq paqvtpsswa qptsavnpfq ssmftspplp aqtasalpsl staasppqpp
      601 praavqkels kkesdafial dplgdremkd vkemfkdfql tkppavparr geqqslsgas
      661 gvpssycrsk shqslflnkv rcqlkaclkv kikqtlsvph lrnlrihllv llminlatrl
      721 hrscvtrkgq me
//
LOCUS       XP_041328464             731 aa            linear   VRT 06-MAY-2021
DEFINITION  disabled homolog 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041328464
VERSION     XP_041328464.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472530.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..731
                     /product="disabled homolog 2 isoform X2"
                     /calculated_mol_wt=79255
     Region          36..173
                     /region_name="PTB_Dab"
                     /note="Disabled (Dab) Phosphotyrosine-binding domain;
                     cd01215"
                     /db_xref="CDD:269926"
     Site            order(54,88,90..91,133,151)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269926"
     Site            order(65,119..123,140,160,163..164,167)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269926"
     Region          <404..605
                     /region_name="PPE"
                     /note="PPE-repeat protein [Function unknown]; COG5651"
                     /db_xref="CDD:444372"
     CDS             1..731
                     /gene="DAB2"
                     /coded_by="XM_041472530.1:179..2374"
                     /db_xref="GeneID:121356284"
ORIGIN      
        1 msteaetaat nsqpeqqapp kaqsskkekk kgpektdesl larfkgdgvk ykakligidd
       61 vpeargdkms qdsmmklkgm aaaarsqgqh kqkiwvnisl sgikiidekt gviehehpvn
      121 kisfiardvt dnrafgyvcg gegqhqffai ktaqqaeplv sdlkdlfqli ynmkkkeeee
      181 kknndgeelp adqadkmkpg vdqmdlfgdm stppdmsspt eakeillvdf nseietkqtf
      241 akedlflngi taslpqpkaq ppflpensfs tnlsffptpn pdpfsddpft qpvqsalssf
      301 dslksdqkks pttltsggng dpngdtdyfd kqfdqisnrt gkqealtcqw pleskspaar
      361 ipnviperer ngfpeaqtnl flegaskgts lqngvkldse nniqltphep itispppqst
      421 kpgrgrrsvk tasddlfssd ffvpstesls lssgaqagas ltnpldlftk ssttasplaa
      481 lgglpvtssp wtpqtvsftq atsvfhgsmm paqspgftqp lvfgtqtvpg wnqsssfgat
      541 ptqssglwsq paqvtpsswa qptsavnpfq ssmftspplp aqtasalpsl staasppqpp
      601 praavqkels kkesdafial dplgdremkd vkemfkdfql tkppavparr geqqslsgas
      661 gvpssycrsk shqslflnkv rcqlkaclkv kikqtlsvph lnlrihllvl lminlatrlh
      721 rscvtrkgqm e
//
LOCUS       XP_041328473             708 aa            linear   VRT 06-MAY-2021
DEFINITION  disabled homolog 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041328473
VERSION     XP_041328473.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472539.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="disabled homolog 2 isoform X3"
                     /calculated_mol_wt=76347
     Region          36..173
                     /region_name="PTB_Dab"
                     /note="Disabled (Dab) Phosphotyrosine-binding domain;
                     cd01215"
                     /db_xref="CDD:269926"
     Site            order(54,88,90..91,133,151)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269926"
     Site            order(65,119..123,140,160,163..164,167)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269926"
     Region          <404..605
                     /region_name="PPE"
                     /note="PPE-repeat protein [Function unknown]; COG5651"
                     /db_xref="CDD:444372"
     CDS             1..708
                     /gene="DAB2"
                     /coded_by="XM_041472539.1:179..2305"
                     /db_xref="GeneID:121356284"
ORIGIN      
        1 msteaetaat nsqpeqqapp kaqsskkekk kgpektdesl larfkgdgvk ykakligidd
       61 vpeargdkms qdsmmklkgm aaaarsqgqh kqkiwvnisl sgikiidekt gviehehpvn
      121 kisfiardvt dnrafgyvcg gegqhqffai ktaqqaeplv sdlkdlfqli ynmkkkeeee
      181 kknndgeelp adqadkmkpg vdqmdlfgdm stppdmsspt eakeillvdf nseietkqtf
      241 akedlflngi taslpqpkaq ppflpensfs tnlsffptpn pdpfsddpft qpvqsalssf
      301 dslksdqkks pttltsggng dpngdtdyfd kqfdqisnrt gkqealtcqw pleskspaar
      361 ipnviperer ngfpeaqtnl flegaskgts lqngvkldse nniqltphep itispppqst
      421 kpgrgrrsvk tasddlfssd ffvpstesls lssgaqagas ltnpldlftk ssttasplaa
      481 lgglpvtssp wtpqtvsftq atsvfhgsmm paqspgftqp lvfgtqtvpg wnqsssfgat
      541 ptqssglwsq paqvtpsswa qptsavnpfq ssmftspplp aqtasalpsl staasppqpp
      601 praavqkels kkesdafial dplgdremkd vkemfkdfql tkppavparr geqqslsepp
      661 kpvpqqsalp aeglfesqdk tdpfsasske sqnppsgpfd dqfgnpfa
//
LOCUS       XP_041328481             707 aa            linear   VRT 06-MAY-2021
DEFINITION  disabled homolog 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041328481
VERSION     XP_041328481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="disabled homolog 2 isoform X4"
                     /calculated_mol_wt=76219
     Region          36..173
                     /region_name="PTB_Dab"
                     /note="Disabled (Dab) Phosphotyrosine-binding domain;
                     cd01215"
                     /db_xref="CDD:269926"
     Site            order(54,88,90..91,133,151)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269926"
     Site            order(65,119..123,140,160,163..164,167)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269926"
     Region          <404..605
                     /region_name="PPE"
                     /note="PPE-repeat protein [Function unknown]; COG5651"
                     /db_xref="CDD:444372"
     Region          <540..697
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..707
                     /gene="DAB2"
                     /coded_by="XM_041472547.1:179..2302"
                     /db_xref="GeneID:121356284"
ORIGIN      
        1 msteaetaat nsqpeqqapp kaqsskkekk kgpektdesl larfkgdgvk ykakligidd
       61 vpeargdkms qdsmmklkgm aaaarsqgqh kqkiwvnisl sgikiidekt gviehehpvn
      121 kisfiardvt dnrafgyvcg gegqhqffai ktaqqaeplv sdlkdlfqli ynmkkkeeee
      181 kknndgeelp adqadkmkpg vdqmdlfgdm stppdmsspt eakeillvdf nseietkqtf
      241 akedlflngi taslpqpkaq ppflpensfs tnlsffptpn pdpfsddpft qpvqsalssf
      301 dslksdqkks pttltsggng dpngdtdyfd kqfdqisnrt gkqealtcqw pleskspaar
      361 ipnviperer ngfpeaqtnl flegaskgts lqngvkldse nniqltphep itispppqst
      421 kpgrgrrsvk tasddlfssd ffvpstesls lssgaqagas ltnpldlftk ssttasplaa
      481 lgglpvtssp wtpqtvsftq atsvfhgsmm paqspgftqp lvfgtqtvpg wnqsssfgat
      541 ptqssglwsq paqvtpsswa qptsavnpfq ssmftspplp aqtasalpsl staasppqpp
      601 praavqkels kkesdafial dplgdremkd vkemfkdfql tkppavparr geqqslsepp
      661 kpvpqqsalp aeglfesqdk tdpfsasses qnppsgpfdd qfgnpfa
//
LOCUS       XP_041328495            1407 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear pore complex protein Nup155 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328495
VERSION     XP_041328495.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472561.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1407
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1407
                     /product="nuclear pore complex protein Nup155 isoform X1"
                     /calculated_mol_wt=156302
     Region          70..502
                     /region_name="Nucleoporin_N"
                     /note="Nup133 N terminal like; pfam08801"
                     /db_xref="CDD:400932"
     Region          77..1343
                     /region_name="NUP170"
                     /note="Nuclear pore complex subunit [Intracellular
                     trafficking and secretion]; COG5308"
                     /db_xref="CDD:227624"
     CDS             1..1407
                     /gene="NUP155"
                     /coded_by="XM_041472561.1:86..4309"
                     /db_xref="GeneID:121356308"
ORIGIN      
        1 mpaatspaap aaqealeiag riidrqiqdd rcypdlsell avpapgsptv sgmsdmdypl
       61 qgpgllsipn lpeissvrrv plppelveqf ghmqcncmmg vfpeisrawl tidsdifmwn
      121 yedggdlayf dglsetilav glvkpkagif qphvrhllvl atpvdivilg lhcsnlqsgt
      181 gslndsmsgg mqllpdplys lptdntyila itstdngrif lagkdgclye vayqaeagwf
      241 sqrcrkinhs ksalsflips llqftfsedd pvvqiaidns rnilytrsek gvlqvydlgq
      301 dgqgmtrvts lsqnaivsaa gsiartidrs vfkpviqiav iessesidcq llaithagvr
      361 lyfstsqfkh ptarpsmltl vhvrlppgfs assnvekpak vhralyskgv llmaasened
      421 ndilwcvnhd sfpfqkpmme tqmttrvdgh swalsaidef kvqkivtpln kdiipitdsp
      481 vvvqqhmlpp kkfvllsaqg simfhklrpv dqlrhllvsn tggdgeeier ffklhqedqa
      541 catclilacs naaydrevsa watraffryg geaqmrfpsa lpppsnvgpi lgspvsavtg
      601 pggrwhhssp ttfsvyskgt pltvdspysn psiltsgqgl qppamstpif tpgnsmshpg
      661 tsisgmmgpe ivfsgrhngi ciyfariign iwdgsivver vfksgnreiv aiessvpsrm
      721 lecvlqelkg lqefldrnsq fatvgalgnp sfstpanlqq rllgfmrpdg gssqqvqqel
      781 qrkyhaeaql tektslqgiq qlvrktcqal alwkllcehq fsvavgelqk elqeqlkvta
      841 fkdlvirdre ltgaliasli ncyirdnaav dgiiahlqdi cpllystdda vcskanellq
      901 rsrqaqskme kekmlreslk eyqkisnqvd lanvcaqyrq vrfyegvvel sltaaekkdp
      961 qglglhfykn gepeedvvgl qafqerlnsy kcitdtlqel vnqskaapqs psvpkkpgpp
     1021 vlssdpnmls neeaghhfeq mlklaqrstd elfsialynw liqadladkl lqvtapflep
     1081 ylvrmtkidq nkvrymdllw ryfeknrnfs naarvlakla dlhsteislq qrleyiarai
     1141 lsaksstais slaadgeflh eleekmevar iqlqiqetlq rqyshhssvq daisqldael
     1201 mditklygef adpfklseck laiihcaghs dpilvqtlwq eviekelsds vslspadrmq
     1261 alclklallg kiyagtpryf pldflvqfle qqvctlnwdv gfvtytmqei gvplprllev
     1321 ydqlfkardp ywsrmkkplh llecihvlls gyvqdpsrvp mrrrftnvcl davscylvel
     1381 qsmsptlmvq ttignfkslq aklerlh
//
LOCUS       XP_041328504            1386 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear pore complex protein Nup155 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328504
VERSION     XP_041328504.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472570.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1386
                     /product="nuclear pore complex protein Nup155 isoform X2"
                     /calculated_mol_wt=154032
     Region          70..502
                     /region_name="Nucleoporin_N"
                     /note="Nup133 N terminal like; pfam08801"
                     /db_xref="CDD:400932"
     Region          77..1322
                     /region_name="NUP170"
                     /note="Nuclear pore complex subunit [Intracellular
                     trafficking and secretion]; COG5308"
                     /db_xref="CDD:227624"
     CDS             1..1386
                     /gene="NUP155"
                     /coded_by="XM_041472570.1:86..4246"
                     /db_xref="GeneID:121356308"
ORIGIN      
        1 mpaatspaap aaqealeiag riidrqiqdd rcypdlsell avpapgsptv sgmsdmdypl
       61 qgpgllsipn lpeissvrrv plppelveqf ghmqcncmmg vfpeisrawl tidsdifmwn
      121 yedggdlayf dglsetilav glvkpkagif qphvrhllvl atpvdivilg lhcsnlqsgt
      181 gslndsmsgg mqllpdplys lptdntyila itstdngrif lagkdgclye vayqaeagwf
      241 sqrcrkinhs ksalsflips llqftfsedd pvvqiaidns rnilytrsek gvlqvydlgq
      301 dgqgmtrvts lsqnaivsaa gsiartidrs vfkpviqiav iessesidcq llaithagvr
      361 lyfstsqfkh ptarpsmltl vhvrlppgfs assnvekpak vhralyskgv llmaasened
      421 ndilwcvnhd sfpfqkpmme tqmttrvdgh swalsaidef kvqkivtpln kdiipitdsp
      481 vvvqqhmlpp kkfvllsaqg simfhklrpv dqlrhllvsn tggdgeeier ffklhqedqa
      541 catclilacs naaydrevsa watraffryg geaqmrfpsa lpppsnvgpi lgspvsagtp
      601 ltvdspysnp siltsgqglq ppamstpift pgnsmshpgt sisgmmgpei vfsgrhngic
      661 iyfariigni wdgsivverv fksgnreiva iessvpsrml ecvlqelkgl qefldrnsqf
      721 atvgalgnps fstpanlqqr llgfmrpdgg ssqqvqqelq rkyhaeaqlt ektslqgiqq
      781 lvrktcqala lwkllcehqf svavgelqke lqeqlkvtaf kdlvirdrel tgaliaslin
      841 cyirdnaavd giiahlqdic pllystddav cskanellqr srqaqskmek ekmlreslke
      901 yqkisnqvdl anvcaqyrqv rfyegvvels ltaaekkdpq glglhfykng epeedvvglq
      961 afqerlnsyk citdtlqelv nqskaapqsp svpkkpgppv lssdpnmlsn eeaghhfeqm
     1021 lklaqrstde lfsialynwl iqadladkll qvtapflepy lvrmtkidqn kvrymdllwr
     1081 yfeknrnfsn aarvlaklad lhsteislqq rleyiarail saksstaiss laadgeflhe
     1141 leekmevari qlqiqetlqr qyshhssvqd aisqldaelm ditklygefa dpfklseckl
     1201 aiihcaghsd pilvqtlwqe viekelsdsv slspadrmqa lclklallgk iyagtpryfp
     1261 ldflvqfleq qvctlnwdvg fvtytmqeig vplprllevy dqlfkardpy wsrmkkplhl
     1321 lecihvllsg yvqdpsrvpm rrrftnvcld avscylvelq smsptlmvqt tignfkslqa
     1381 klerlh
//
LOCUS       XP_041328517             100 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L37, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328517
VERSION     XP_041328517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472583.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..100
                     /product="60S ribosomal protein L37"
     Region          5..91
                     /region_name="PTZ00073"
                     /note="60S ribosomal protein L37; Provisional"
                     /db_xref="CDD:240257"
     CDS             1..100
                     /gene="RPL37"
                     /coded_by="XM_041472583.1:<1..303"
                     /db_xref="GeneID:121356319"
ORIGIN      
        1 nafqtkgtss fgkrrnktht lcrrcgskay hlqkstcgkc gypakrkrky nwsakakrrn
       61 ttgtgrmrhl kkvyrrfrng fregttpkpk raavaassss
//
LOCUS       XP_041328532             653 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 70 [Pyrgilauda ruficollis].
ACCESSION   XP_041328532
VERSION     XP_041328532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472598.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..653
                     /product="WD repeat-containing protein 70"
                     /calculated_mol_wt=72382
     Region          177..498
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(181,199,203,209..210,226,230,246,250,256..257,
                     281..282,300,305,311..312,331,348,353,359..360,374..375,
                     395,399,405..406,419..420,439,450,456..457,469..470,488,
                     492,498)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          185..229
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          233..281
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          336..370
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          377..418
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          426..468
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          475..498
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..653
                     /gene="WDR70"
                     /coded_by="XM_041472598.1:25..1986"
                     /db_xref="GeneID:121356324"
ORIGIN      
        1 mepaaegdae mlgtpdqela stmgfsgfgk kartfdleam feqtrrtave rsrkvleare
       61 rekedqteke fripysassv sassatgpgs tltereavcs esedssneal sgpsmqsqss
      121 akgpaedtdd dddeeeqfig pplppgfkds dddndnddae eednnpvkki pdsheitlqh
      181 gtktvsalgl dpsgarlitg gydydvkfwd fagmdaslqa frslqpcech qikslqysst
      241 gdvilvvsgn sqakvldrdg fpvmecikgd qyivdmtntk ghtamlnsgc whpklkeefl
      301 tcsndgtvrt wdvnnekkhk svfkprsvqg krvipttcty srdgkliaag cqdgsiqiwd
      361 rnmsvhtkfh crqahapgtd tscltfsydg tvlasrggdd tlkiwdirqf kkplnsadgl
      421 psffpmtdcc fspddkilvt gtsvkkgggs gklfffyret fqklyeievt dasvvrclwh
      481 pklnqimvgt gnglakvyyd pvksqrgakl cvvktkrker qaetltqdyi itphalpmfr
      541 eprqrstrkq lekdrldpmk shkpeppvag agrggrvgth gvtlssyivk nialdktdds
      601 npreailrha keaeenpywv apayaktqpk tvfaeveped detdkpewkk rki
//
LOCUS       XP_041328543             842 aa            linear   VRT 06-MAY-2021
DEFINITION  FYN-binding protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041328543
VERSION     XP_041328543.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472609.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..842
                     /product="FYN-binding protein 1 isoform X1"
                     /calculated_mol_wt=93714
     Region          <51..416
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          499..>563
                     /region_name="hSH3"
                     /note="Helically-extended SH3 domain; pfam14603"
                     /db_xref="CDD:464216"
     Region          755..836
                     /region_name="hSH3"
                     /note="Helically-extended SH3 domain; pfam14603"
                     /db_xref="CDD:464216"
     CDS             1..842
                     /gene="FYB1"
                     /coded_by="XM_041472609.1:108..2636"
                     /db_xref="GeneID:121356329"
ORIGIN      
        1 mekfercnrd tedpsnsrpi kiprkdaakg lqmrkaifee ctdkgctafp pgpstlhkpv
       61 qskppmavkp ssddktdkdp npphlkpvtq rfgvqlqpin rgndekagcs kfsiktsdps
      121 kedpkpsnpk paqnkflapp nkeknplgpk pnlnfasqen eakpefskva avkeklrsat
      181 qenepkppvs kpplaqkpsl nnevsqnent syksgfrqrp saprknihah qvakemgens
      241 nsaaeapgsn ipkialkptg hgyslpkgpp ktmadnseek gmsaaknifl kkitqeeags
      301 shkflktnma laagrpsges keneerrstm prlkvlpqgl kpsqppqkpd rpltvdleif
      361 qktcqenspk nkglkqktss saalappipp shtavppppp afhpslqvpa apslpprnik
      421 tssetinlen eenyddvefv sqghgntqrg qesdgemyed indirssrgk ekkqdkedkr
      481 rmdqekigqk ekdkkelelr kkfkltgpie vlhqaracin ykggrneltv kqgdkieiir
      541 ltnnpegkwl grikgcygyi kttmveidyd slkrkqkpst raavkhteqd qgtyddvgqq
      601 dttssqsgdr dggesmfppp psdqdiydgi ddedaiarsv sqdedkngiw swgilkrlkv
      661 kdgkkksvre ktakvneaee nenlfmssst kqsgkdygdn vyddvdssdf sapppvssss
      721 ksvslgkpks dakygqklkk mekeekefrk rfkfdseikv lystttvqnl sqkrwwykdl
      781 qikpgesldi iestddtkvl crnkegkygy vlrsnlvqnd geiyddigdd ciydndsdae
      841 cs
//
LOCUS       XP_041328553             842 aa            linear   VRT 06-MAY-2021
DEFINITION  FYN-binding protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041328553
VERSION     XP_041328553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..842
                     /product="FYN-binding protein 1 isoform X1"
                     /calculated_mol_wt=93714
     Region          <51..416
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          499..>563
                     /region_name="hSH3"
                     /note="Helically-extended SH3 domain; pfam14603"
                     /db_xref="CDD:464216"
     Region          755..836
                     /region_name="hSH3"
                     /note="Helically-extended SH3 domain; pfam14603"
                     /db_xref="CDD:464216"
     CDS             1..842
                     /gene="FYB1"
                     /coded_by="XM_041472619.1:167..2695"
                     /db_xref="GeneID:121356329"
ORIGIN      
        1 mekfercnrd tedpsnsrpi kiprkdaakg lqmrkaifee ctdkgctafp pgpstlhkpv
       61 qskppmavkp ssddktdkdp npphlkpvtq rfgvqlqpin rgndekagcs kfsiktsdps
      121 kedpkpsnpk paqnkflapp nkeknplgpk pnlnfasqen eakpefskva avkeklrsat
      181 qenepkppvs kpplaqkpsl nnevsqnent syksgfrqrp saprknihah qvakemgens
      241 nsaaeapgsn ipkialkptg hgyslpkgpp ktmadnseek gmsaaknifl kkitqeeags
      301 shkflktnma laagrpsges keneerrstm prlkvlpqgl kpsqppqkpd rpltvdleif
      361 qktcqenspk nkglkqktss saalappipp shtavppppp afhpslqvpa apslpprnik
      421 tssetinlen eenyddvefv sqghgntqrg qesdgemyed indirssrgk ekkqdkedkr
      481 rmdqekigqk ekdkkelelr kkfkltgpie vlhqaracin ykggrneltv kqgdkieiir
      541 ltnnpegkwl grikgcygyi kttmveidyd slkrkqkpst raavkhteqd qgtyddvgqq
      601 dttssqsgdr dggesmfppp psdqdiydgi ddedaiarsv sqdedkngiw swgilkrlkv
      661 kdgkkksvre ktakvneaee nenlfmssst kqsgkdygdn vyddvdssdf sapppvssss
      721 ksvslgkpks dakygqklkk mekeekefrk rfkfdseikv lystttvqnl sqkrwwykdl
      781 qikpgesldi iestddtkvl crnkegkygy vlrsnlvqnd geiyddigdd ciydndsdae
      841 cs
//
LOCUS       XP_041328562             795 aa            linear   VRT 06-MAY-2021
DEFINITION  FYN-binding protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041328562
VERSION     XP_041328562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..795
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..795
                     /product="FYN-binding protein 1 isoform X2"
                     /calculated_mol_wt=88230
     Region          <51..416
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          493..566
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(519,522,527,547..548,561,563..564)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212801"
     Region          708..789
                     /region_name="hSH3"
                     /note="Helically-extended SH3 domain; pfam14603"
                     /db_xref="CDD:464216"
     CDS             1..795
                     /gene="FYB1"
                     /coded_by="XM_041472628.1:108..2495"
                     /db_xref="GeneID:121356329"
ORIGIN      
        1 mekfercnrd tedpsnsrpi kiprkdaakg lqmrkaifee ctdkgctafp pgpstlhkpv
       61 qskppmavkp ssddktdkdp npphlkpvtq rfgvqlqpin rgndekagcs kfsiktsdps
      121 kedpkpsnpk paqnkflapp nkeknplgpk pnlnfasqen eakpefskva avkeklrsat
      181 qenepkppvs kpplaqkpsl nnevsqnent syksgfrqrp saprknihah qvakemgens
      241 nsaaeapgsn ipkialkptg hgyslpkgpp ktmadnseek gmsaaknifl kkitqeeags
      301 shkflktnma laagrpsges keneerrstm prlkvlpqgl kpsqppqkpd rpltvdleif
      361 qktcqenspk nkglkqktss saalappipp shtavppppp afhpslqvpa apslpprnik
      421 tssetinlen eenyddvefv sqghgntqrg qesdgemyed indirssrgk ekkqdkedkr
      481 rmdqekigqk ekdkkelelr kkfkltgpie vlhqaracin ykggrneltv kqgdkieiir
      541 ltnnpegkwl grikgcygyi kttmveidyd slkrkqkpst raavkhteqd qgtyddvgqq
      601 dttssqsgdr dggesmfppp psdqdiydgi ddedaiasms sstkqsgkdy gdnvyddvds
      661 sdfsapppvs sssksvslgk pksdakygqk lkkmekeeke frkrfkfdse ikvlystttv
      721 qnlsqkrwwy kdlqikpges ldiiestddt kvlcrnkegk ygyvlrsnlv qndgeiyddi
      781 gddciydnds daecs
//
LOCUS       XP_041328574            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  leukemia inhibitory factor receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328574
VERSION     XP_041328574.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472640.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="leukemia inhibitory factor receptor-like"
                     /calculated_mol_wt=121147
     Region          35..112
                     /region_name="LIFR_N"
                     /note="Leukemia inhibitory factor receptor N-terminal
                     domain; pfam18207"
                     /db_xref="CDD:436347"
     Region          114..227
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          <389..>634
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          418..516
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(418,486,501)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(505..506,508..509)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          715..815
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(805..806,808..809)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1090
                     /gene="LOC121356345"
                     /coded_by="XM_041472640.1:203..3475"
                     /db_xref="GeneID:121356345"
ORIGIN      
        1 mwknsslrcl lalailclrs lmysqeigsp rdpqnlkcvt hnlhkmlctw dvpsrgrhgq
       61 tdfcyttndl tpqvcfktke rrveipvpes sitvtikssg aafatrefvi hqkdisfvpv
      121 tphilslmpd fptstlnlkw sdngsvfpyg ldalwqiqil rkealevvtq vtyyskltre
      181 dvilswnwts dmplectshy vkirsyinat qfvgpkdwsd wspaevipgk dtepggsgvf
      241 pldpvvavgs dltfccvhee dqhitnmtyg sksytmmqls rrshairvln asvsntsgtn
      301 vvcrlengle gsvvfvgyap dipqnlscet pnfliikctw kpgrpsglyg errtkyslfe
      361 rtsgknvsce vnevnrdhvc gfpvlpdqkt ydfilgvsnp igqaqssllv ditqrvhpka
      421 pekltvtgnn stsiqlrwfi ngsfaetrll cqieissshs erklrnvsip grksstytaq
      481 lnalhpdtky qlrvrcsaad hfwrwsdwsr gveqttseap pargpdiwre rspsgesliv
      541 fwkplslset ngkivshevs cylletlles kvvlepsnst eiklgksdcv isvvarnrag
      601 ssppsritsv elpsdnvttd qavamgngin iswdsypnmt cgyivkwchs sgseacsvdw
      661 qkfpsnttna viksalfkpg vrynfslygc ksmgyqllkn vtgymkelpp ktapnfivee
      721 tssdsilvkw edipieecrg flkgyllsfa kgekdalkpr lsesgnpelk vnnitdltkk
      781 smkildlqgk tsyqlelqay tagglsppns lyvvtkedsv gliiailipv avvlllgvla
      841 sifcyrkrew iketfypeip npenskalqf qrnicegnkt lktlemnpct pnsvevvetq
      901 stapkiedte mmspaaettv pedgsdseme nhvvvsycpp iieeeisnlp tdepggssqv
      961 vyidiqsmyq pqikpeeepg idlvttagyk pqmqlsisal kieghspvee eldktagyrp
     1021 qantntntwn mgtpdspgsv essnenasfg spcsinsrqf llppkddeds pkpintgwsf
     1081 thffqnkpnd
//
LOCUS       XP_041328582            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  leukemia inhibitory factor receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328582
VERSION     XP_041328582.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472648.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="leukemia inhibitory factor receptor-like"
                     /calculated_mol_wt=121147
     Region          35..112
                     /region_name="LIFR_N"
                     /note="Leukemia inhibitory factor receptor N-terminal
                     domain; pfam18207"
                     /db_xref="CDD:436347"
     Region          114..227
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          <389..>634
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          418..516
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(418,486,501)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(505..506,508..509)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          715..815
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(805..806,808..809)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1090
                     /gene="LOC121356345"
                     /coded_by="XM_041472648.1:211..3483"
                     /db_xref="GeneID:121356345"
ORIGIN      
        1 mwknsslrcl lalailclrs lmysqeigsp rdpqnlkcvt hnlhkmlctw dvpsrgrhgq
       61 tdfcyttndl tpqvcfktke rrveipvpes sitvtikssg aafatrefvi hqkdisfvpv
      121 tphilslmpd fptstlnlkw sdngsvfpyg ldalwqiqil rkealevvtq vtyyskltre
      181 dvilswnwts dmplectshy vkirsyinat qfvgpkdwsd wspaevipgk dtepggsgvf
      241 pldpvvavgs dltfccvhee dqhitnmtyg sksytmmqls rrshairvln asvsntsgtn
      301 vvcrlengle gsvvfvgyap dipqnlscet pnfliikctw kpgrpsglyg errtkyslfe
      361 rtsgknvsce vnevnrdhvc gfpvlpdqkt ydfilgvsnp igqaqssllv ditqrvhpka
      421 pekltvtgnn stsiqlrwfi ngsfaetrll cqieissshs erklrnvsip grksstytaq
      481 lnalhpdtky qlrvrcsaad hfwrwsdwsr gveqttseap pargpdiwre rspsgesliv
      541 fwkplslset ngkivshevs cylletlles kvvlepsnst eiklgksdcv isvvarnrag
      601 ssppsritsv elpsdnvttd qavamgngin iswdsypnmt cgyivkwchs sgseacsvdw
      661 qkfpsnttna viksalfkpg vrynfslygc ksmgyqllkn vtgymkelpp ktapnfivee
      721 tssdsilvkw edipieecrg flkgyllsfa kgekdalkpr lsesgnpelk vnnitdltkk
      781 smkildlqgk tsyqlelqay tagglsppns lyvvtkedsv gliiailipv avvlllgvla
      841 sifcyrkrew iketfypeip npenskalqf qrnicegnkt lktlemnpct pnsvevvetq
      901 stapkiedte mmspaaettv pedgsdseme nhvvvsycpp iieeeisnlp tdepggssqv
      961 vyidiqsmyq pqikpeeepg idlvttagyk pqmqlsisal kieghspvee eldktagyrp
     1021 qantntntwn mgtpdspgsv essnenasfg spcsinsrqf llppkddeds pkpintgwsf
     1081 thffqnkpnd
//
LOCUS       XP_041328590            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  leukemia inhibitory factor receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328590
VERSION     XP_041328590.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472656.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="leukemia inhibitory factor receptor-like"
                     /calculated_mol_wt=121147
     Region          35..112
                     /region_name="LIFR_N"
                     /note="Leukemia inhibitory factor receptor N-terminal
                     domain; pfam18207"
                     /db_xref="CDD:436347"
     Region          114..227
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          <389..>634
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          418..516
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(418,486,501)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(505..506,508..509)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          715..815
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(805..806,808..809)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1090
                     /gene="LOC121356345"
                     /coded_by="XM_041472656.1:175..3447"
                     /db_xref="GeneID:121356345"
ORIGIN      
        1 mwknsslrcl lalailclrs lmysqeigsp rdpqnlkcvt hnlhkmlctw dvpsrgrhgq
       61 tdfcyttndl tpqvcfktke rrveipvpes sitvtikssg aafatrefvi hqkdisfvpv
      121 tphilslmpd fptstlnlkw sdngsvfpyg ldalwqiqil rkealevvtq vtyyskltre
      181 dvilswnwts dmplectshy vkirsyinat qfvgpkdwsd wspaevipgk dtepggsgvf
      241 pldpvvavgs dltfccvhee dqhitnmtyg sksytmmqls rrshairvln asvsntsgtn
      301 vvcrlengle gsvvfvgyap dipqnlscet pnfliikctw kpgrpsglyg errtkyslfe
      361 rtsgknvsce vnevnrdhvc gfpvlpdqkt ydfilgvsnp igqaqssllv ditqrvhpka
      421 pekltvtgnn stsiqlrwfi ngsfaetrll cqieissshs erklrnvsip grksstytaq
      481 lnalhpdtky qlrvrcsaad hfwrwsdwsr gveqttseap pargpdiwre rspsgesliv
      541 fwkplslset ngkivshevs cylletlles kvvlepsnst eiklgksdcv isvvarnrag
      601 ssppsritsv elpsdnvttd qavamgngin iswdsypnmt cgyivkwchs sgseacsvdw
      661 qkfpsnttna viksalfkpg vrynfslygc ksmgyqllkn vtgymkelpp ktapnfivee
      721 tssdsilvkw edipieecrg flkgyllsfa kgekdalkpr lsesgnpelk vnnitdltkk
      781 smkildlqgk tsyqlelqay tagglsppns lyvvtkedsv gliiailipv avvlllgvla
      841 sifcyrkrew iketfypeip npenskalqf qrnicegnkt lktlemnpct pnsvevvetq
      901 stapkiedte mmspaaettv pedgsdseme nhvvvsycpp iieeeisnlp tdepggssqv
      961 vyidiqsmyq pqikpeeepg idlvttagyk pqmqlsisal kieghspvee eldktagyrp
     1021 qantntntwn mgtpdspgsv essnenasfg spcsinsrqf llppkddeds pkpintgwsf
     1081 thffqnkpnd
//
LOCUS       XP_041328598            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  leukemia inhibitory factor receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328598
VERSION     XP_041328598.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472664.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="leukemia inhibitory factor receptor-like"
                     /calculated_mol_wt=121147
     Region          35..112
                     /region_name="LIFR_N"
                     /note="Leukemia inhibitory factor receptor N-terminal
                     domain; pfam18207"
                     /db_xref="CDD:436347"
     Region          114..227
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          <389..>634
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          418..516
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(418,486,501)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(505..506,508..509)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          715..815
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(805..806,808..809)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1090
                     /gene="LOC121356345"
                     /coded_by="XM_041472664.1:255..3527"
                     /db_xref="GeneID:121356345"
ORIGIN      
        1 mwknsslrcl lalailclrs lmysqeigsp rdpqnlkcvt hnlhkmlctw dvpsrgrhgq
       61 tdfcyttndl tpqvcfktke rrveipvpes sitvtikssg aafatrefvi hqkdisfvpv
      121 tphilslmpd fptstlnlkw sdngsvfpyg ldalwqiqil rkealevvtq vtyyskltre
      181 dvilswnwts dmplectshy vkirsyinat qfvgpkdwsd wspaevipgk dtepggsgvf
      241 pldpvvavgs dltfccvhee dqhitnmtyg sksytmmqls rrshairvln asvsntsgtn
      301 vvcrlengle gsvvfvgyap dipqnlscet pnfliikctw kpgrpsglyg errtkyslfe
      361 rtsgknvsce vnevnrdhvc gfpvlpdqkt ydfilgvsnp igqaqssllv ditqrvhpka
      421 pekltvtgnn stsiqlrwfi ngsfaetrll cqieissshs erklrnvsip grksstytaq
      481 lnalhpdtky qlrvrcsaad hfwrwsdwsr gveqttseap pargpdiwre rspsgesliv
      541 fwkplslset ngkivshevs cylletlles kvvlepsnst eiklgksdcv isvvarnrag
      601 ssppsritsv elpsdnvttd qavamgngin iswdsypnmt cgyivkwchs sgseacsvdw
      661 qkfpsnttna viksalfkpg vrynfslygc ksmgyqllkn vtgymkelpp ktapnfivee
      721 tssdsilvkw edipieecrg flkgyllsfa kgekdalkpr lsesgnpelk vnnitdltkk
      781 smkildlqgk tsyqlelqay tagglsppns lyvvtkedsv gliiailipv avvlllgvla
      841 sifcyrkrew iketfypeip npenskalqf qrnicegnkt lktlemnpct pnsvevvetq
      901 stapkiedte mmspaaettv pedgsdseme nhvvvsycpp iieeeisnlp tdepggssqv
      961 vyidiqsmyq pqikpeeepg idlvttagyk pqmqlsisal kieghspvee eldktagyrp
     1021 qantntntwn mgtpdspgsv essnenasfg spcsinsrqf llppkddeds pkpintgwsf
     1081 thffqnkpnd
//
LOCUS       XP_041328606            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  leukemia inhibitory factor receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328606
VERSION     XP_041328606.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472672.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="leukemia inhibitory factor receptor-like"
                     /calculated_mol_wt=121147
     Region          35..112
                     /region_name="LIFR_N"
                     /note="Leukemia inhibitory factor receptor N-terminal
                     domain; pfam18207"
                     /db_xref="CDD:436347"
     Region          114..227
                     /region_name="LIFR_D2"
                     /note="Leukemia inhibitory factor receptor D2 domain;
                     pfam17971"
                     /db_xref="CDD:375455"
     Region          <389..>634
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          418..516
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(418,486,501)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(505..506,508..509)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          715..815
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(805..806,808..809)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1090
                     /gene="LOC121356345"
                     /coded_by="XM_041472672.1:183..3455"
                     /db_xref="GeneID:121356345"
ORIGIN      
        1 mwknsslrcl lalailclrs lmysqeigsp rdpqnlkcvt hnlhkmlctw dvpsrgrhgq
       61 tdfcyttndl tpqvcfktke rrveipvpes sitvtikssg aafatrefvi hqkdisfvpv
      121 tphilslmpd fptstlnlkw sdngsvfpyg ldalwqiqil rkealevvtq vtyyskltre
      181 dvilswnwts dmplectshy vkirsyinat qfvgpkdwsd wspaevipgk dtepggsgvf
      241 pldpvvavgs dltfccvhee dqhitnmtyg sksytmmqls rrshairvln asvsntsgtn
      301 vvcrlengle gsvvfvgyap dipqnlscet pnfliikctw kpgrpsglyg errtkyslfe
      361 rtsgknvsce vnevnrdhvc gfpvlpdqkt ydfilgvsnp igqaqssllv ditqrvhpka
      421 pekltvtgnn stsiqlrwfi ngsfaetrll cqieissshs erklrnvsip grksstytaq
      481 lnalhpdtky qlrvrcsaad hfwrwsdwsr gveqttseap pargpdiwre rspsgesliv
      541 fwkplslset ngkivshevs cylletlles kvvlepsnst eiklgksdcv isvvarnrag
      601 ssppsritsv elpsdnvttd qavamgngin iswdsypnmt cgyivkwchs sgseacsvdw
      661 qkfpsnttna viksalfkpg vrynfslygc ksmgyqllkn vtgymkelpp ktapnfivee
      721 tssdsilvkw edipieecrg flkgyllsfa kgekdalkpr lsesgnpelk vnnitdltkk
      781 smkildlqgk tsyqlelqay tagglsppns lyvvtkedsv gliiailipv avvlllgvla
      841 sifcyrkrew iketfypeip npenskalqf qrnicegnkt lktlemnpct pnsvevvetq
      901 stapkiedte mmspaaettv pedgsdseme nhvvvsycpp iieeeisnlp tdepggssqv
      961 vyidiqsmyq pqikpeeepg idlvttagyk pqmqlsisal kieghspvee eldktagyrp
     1021 qantntntwn mgtpdspgsv essnenasfg spcsinsrqf llppkddeds pkpintgwsf
     1081 thffqnkpnd
//
LOCUS       XP_041328617             474 aa            linear   VRT 06-MAY-2021
DEFINITION  prostaglandin E2 receptor EP4 subtype [Pyrgilauda ruficollis].
ACCESSION   XP_041328617
VERSION     XP_041328617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472683.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="prostaglandin E2 receptor EP4 subtype"
                     /calculated_mol_wt=51551
     Region          25..329
                     /region_name="7tmA_PGE2_EP4"
                     /note="prostaglandin E2 receptor EP4 subtype, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15142"
                     /db_xref="CDD:320270"
     Region          26..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320270"
     Region          61..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320270"
     Site            order(83,86..87,99..104,106..107,110,155,157..161,187,
                     190..192,194..196,198..199,273,276..277,279..280,283,
                     295..296,298..300,303,306..307)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320270"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320270"
     Region          141..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320270"
     Region          187..216
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320270"
     Region          253..283
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320270"
     Region          296..321
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320270"
     CDS             1..474
                     /gene="PTGER4"
                     /coded_by="XM_041472683.1:550..1974"
                     /db_xref="GeneID:121356375"
ORIGIN      
        1 msfdptimpp angsangtas gaeggkppti ptvmfifgvv gnliaivvlc ksrkeqkett
       61 fytlvcglav tdllgtclvs pvtiatylqn qwpggaalce yssfillffg lsglsiicam
      121 sierylainh ayfynhyvdk klagltlfai yasnvlfcal psmglgkstl qypytwcfid
      181 wrtnvsthaa ysymyagfss flilvtvicn ilvcvalirm hrqfmrrtsl gtdttssrls
      241 dfrrrrsfrr magaeiqmvi lliatslvvv icsiplvvrv fvnqlyrpes vedvrqnpdl
      301 qairiasvnp ildpwiyill rktvlskaie kikclfcrig garrqhsggn fncvdgrrts
      361 savssqspsf isrelreiss tsqtllyppe lsessvggrv llpgpsassa qsdttsvrtl
      421 rssdtsdssq ghdsesvflv seissgggas sapksgplqv tfptetlnls ekci
//
LOCUS       XP_041328627              42 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328627
VERSION     XP_041328627.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472693.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024508999.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..42
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..42
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-3"
     Region          <1..42
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     CDS             1..42
                     /gene="LOC121356384"
                     /coded_by="XM_041472693.1:<1..129"
                     /db_xref="GeneID:121356384"
ORIGIN      
        1 vskaaaells yceahacedp lltpvptsen pfrekkffca ll
//
LOCUS       XP_041328639             203 aa            linear   VRT 06-MAY-2021
DEFINITION  alanine aminotransferase 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328639
VERSION     XP_041328639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509011.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..203
                     /product="alanine aminotransferase 2-like"
                     /calculated_mol_wt=22485
     Region          <2..203
                     /region_name="PTZ00377"
                     /note="alanine aminotransferase; Provisional"
                     /db_xref="CDD:240391"
     CDS             1..203
                     /gene="LOC121356391"
                     /coded_by="XM_041472705.1:138..749"
                     /db_xref="GeneID:121356391"
ORIGIN      
        1 memgppysds velasfhsis kgymgecglr ggymevvnlh pevkaelakl vsvrlcppvp
       61 gqmvldvvmd ppkpgdpsye rfqaekeavl salaekarlt qeifnrtpgi hcnpvqgamy
      121 sfpridlppr avaaarekkq apdmffcmrl leetgicvvp gsgfgqkegt yhfrmtilpp
      181 teklkillek lsdfytkfvq efs
//
LOCUS       XP_041328651             347 aa            linear   VRT 06-MAY-2021
DEFINITION  mucolipin-1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328651
VERSION     XP_041328651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472717.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509022.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="mucolipin-1-like"
                     /calculated_mol_wt=37103
     Region          <94..127
                     /region_name="ELD_TRPML"
                     /note="extracytosolic/lumenal domain (ELD) found in
                     transient receptor potential channel mucolipins (TRPMLs);
                     cl41763"
                     /db_xref="CDD:425394"
     Region          <197..330
                     /region_name="PKD_channel"
                     /note="Polycystin cation channel; pfam08016"
                     /db_xref="CDD:462341"
     CDS             1..347
                     /gene="LOC121356400"
                     /coded_by="XM_041472717.1:1..1044"
                     /db_xref="GeneID:121356400"
ORIGIN      
        1 mavavtvtvt mtlittttvt ttltvtvtit itvtmsdndn eintdndtds dsdidadsdn
       61 dadsdndtds didadsdtds dnnidndsch pcpqvtfdns ahsgrvrirl dthaairech
      121 hpslpgrgds gamsptgdtv slgtmgtlsl pgrdtatlgt mgghivtspr vtvawgrggg
      181 tvpvspqnfs gydvcsillg tstllvwvgv iryltffrky nilivtlrva lpnvmrfccc
      241 vaviylgycf cgwivlgphh vkfrslsmvs eclfslvngd dmfatfaalr psgalvwlfs
      301 qvylysfsal fiymvlslfi alitgsydti kvsatggtsp gcditwv
//
LOCUS       XP_041328663             522 aa            linear   VRT 06-MAY-2021
DEFINITION  transportin-2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328663
VERSION     XP_041328663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472729.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509033.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>522
                     /product="transportin-2-like"
     Region          9..>136
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     Region          43..64
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(56..57,60,63..64,94..95,98,101..102,105,140..141,
                     144,147..148,151,181..182,185,188..189,222..223,226,
                     229..230)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          75..226
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          77..105
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          122..152
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          163..189
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          200..231
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          474..522
                     /region_name="HEAT_EZ"
                     /note="HEAT-like repeat; pfam13513"
                     /db_xref="CDD:463906"
     CDS             1..522
                     /gene="LOC121356407"
                     /coded_by="XM_041472729.1:<1..>1568"
                     /db_xref="GeneID:121356407"
ORIGIN      
        1 ptppvappde ptrslsglil knnvkahfqs fpppvaefik qeclnhlgda ssliratigi
       61 littiaskge lqmwpellpq lcnllnsedy ntcegafgal qkicedssel ldsdalnrpl
      121 nvmipkflqf fkhcspkirs haiacvnqfi mdraqalmen idtfiehlfa lavdedpevr
      181 knvcralvml levridrlip hmysiiqyml qrtqdsdenv aleacefwlt laeqpickdv
      241 ltahlvhcdt ttsrchavms hrytilcrnm vtsrhdtttl crdtmasrhd ttalrhaamt
      301 shrdtvtsrh htttshrdmt scrdtmtsry ksiaplrddi tlvpttsrch attphrdakp
      361 lrrdattsrr nttshrdvsr ypqgdveede avpdseqdik prfhksrtvt laheeqrgdg
      421 dgdgddeddd dtlsdwnlrk csaaaldvla nvfreellph llpllkellf hlewvvkesg
      481 ilvlgaiaeg cmqgmvpylp kliphliphl ipdpvsqaac ra
//
LOCUS       XP_041328688             784 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich protein 12-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328688
VERSION     XP_041328688.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472754.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509044.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>784
                     /product="proline-rich protein 12-like"
     Region          <323..539
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..784
                     /gene="LOC121356411"
                     /coded_by="XM_041472754.1:<1..>2355"
                     /codon_start=3
                     /db_xref="GeneID:121356411"
ORIGIN      
        1 vpvspglsgl fetglhhagg aapdasvmnl isalesrgpq pgpsasslls qfrtlpiypr
       61 gamhtpapae lfisgalpgs gtfpsssalg pyqhpasfgg rsfpvgspls lpeaafspgs
      121 ngllsphdpl lhikptqpav psslgfdrlg savlgsalpa qtppyrpaps ssqfnllaat
      181 eqppqlynap vfgganaagg gdraisrqds vikhyqrpgg aqpqlppapg lqhylscggs
      241 yqqvpahrap lscsplgeqs passegsqqp pkaappaprp epgyrpiiqs pgysggaaga
      301 agnggagggn ggksksysas rqpprstntp kcqssytpst pkpssviasq spayspgqpp
      361 qsllamggap gysapgapqs lagaaqpagg fsggqagdlg gkgggyqggg qgggqgglqp
      421 cvsgagtysp eqlqalpygv qpeggqaggy gppapsqglp taspsltyst ghspampgpp
      481 lpyaglggss pspiirplqs ppaarpqsga spgqsqkylg svlspsfmap qgygaapggg
      541 lerqpppapp gappnfgkga kgeaellaae rsededfliq hllqapsppr eglggceerp
      601 ktlggyggal gkeeryqlqs virpnsnlea plelallkek kkpergkefr gaggggggge
      661 vaatsvvhyg hqpppaldty elkkppehla ggkelgqppp phsylpktpe hgrlvgegpp
      721 lephnllldp spelggsllp svlthtqsql hprpkarapl dvhlleqqrm pppppppppg
      781 gfgm
//
LOCUS       XP_041328701             109 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 28B-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328701
VERSION     XP_041328701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472767.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509056.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>109
                     /product="coiled-coil domain-containing protein 28B-like"
     Region          <13..71
                     /region_name="CCDC28"
                     /note="Coiled-coil domain-containing protein 28;
                     pfam13270"
                     /db_xref="CDD:463822"
     CDS             1..109
                     /gene="LOC121356415"
                     /coded_by="XM_041472767.1:<1..>329"
                     /codon_start=2
                     /db_xref="GeneID:121356415"
ORIGIN      
        1 csgqfwkvll spgkacsfeq lehvrelqek larlhfgldg cveelpeeqk kaaadrnldq
       61 llahleelss smypwlvava vagvavagvv dgddgsggsd gsvsggcds
//
LOCUS       XP_041328715             428 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: CD226 antigen [Pyrgilauda ruficollis].
ACCESSION   XP_041328715
VERSION     XP_041328715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472781.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 30% of CDS bases
            frameshifts          :: corrected 5 indels
            internal stop codons :: corrected 3 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..428
                     /product="LOW QUALITY PROTEIN: CD226 antigen"
                     /calculated_mol_wt=48538
     Region          2..108
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          16..20
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          32..36
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          83..91
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..103
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..428
                     /gene="CD226"
                     /coded_by="XM_041472781.1:1..1287"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 4 bases in 3 codons;
                     deleted 3 bases in 2 codons; substituted 3 bases at 3
                     genomic stop codons"
                     /db_xref="GeneID:121356422"
ORIGIN      
        1 meaxfadssa kxsekvkmqc iypkkkkavi iqtsrmklnv tlrentavln piygihtkdk
       61 ynrricfenn axfiestled hglhitnifs ivtnpegilk kvieithstd afevsekqnn
      121 rmftkpggnv aftxpdkigd svqxamwesi kadwvdivil cnssgkqsfg lgfkectpvd
      181 csdqeisgtv fqnvtasdfv myfhvaagrn knymmnvtva vnpsnssivv avywrkeyes
      241 ieehevqyes entplypfkr ppstwdhkwf itylaerisa avsmldflli ffittachrk
      301 rkkrriteal skalystqiw lrspvemkit hatfrdysgl ciivscygrs nfhgihsrer
      361 rgexsslrqt eeiyvncknv sqkhkkrslg sflrmkqseh rpfiyridfi fsvlynalrv
      421 mrreqasg
//
LOCUS       XP_041328736             316 aa            linear   VRT 06-MAY-2021
DEFINITION  protein disulfide-isomerase TMX3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328736
VERSION     XP_041328736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="protein disulfide-isomerase TMX3 isoform X1"
                     /calculated_mol_wt=36015
     Region          28..131
                     /region_name="PDI_a_TMX3"
                     /note="PDIa family, TMX3 subfamily; composed of eukaryotic
                     proteins similar to human TMX3, a TRX related
                     transmembrane protein containing one redox active TRX
                     domain at the N-terminus and a classical ER retrieval
                     sequence for type I transmembrane proteins at...; cd03000"
                     /db_xref="CDD:239298"
     Region          30..>282
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     Site            order(54,57,118)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239298"
     CDS             1..316
                     /gene="TMX3"
                     /coded_by="XM_041472802.1:14..964"
                     /db_xref="GeneID:121356431"
ORIGIN      
        1 maaapggrpr cllwaavvah vvasgagfve dldesfkenr kddiwlvdfy apwcghckkl
       61 epvwnevgie mrnmgspvkv gkmdatsfss iasefgvrgy ptikllkgdl aynyrgprtk
      121 ddiiefanrv agplirplps qhmfehvqkr hrvlfvyvgg esplkekyie vaselivyty
      181 ffsasedvlp eyvtlpelpa vmvfkdgtyf vydeyedgdl sswinrerfq gylhvdgftl
      241 yelgdtgklv aiaviddkns svehtrlksi iqevardyrd hfhrdfqfgh mdgndyinsl
      301 lmehrvvmdf cnesre
//
LOCUS       XP_041328746             247 aa            linear   VRT 06-MAY-2021
DEFINITION  protein disulfide-isomerase TMX3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328746
VERSION     XP_041328746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..247
                     /product="protein disulfide-isomerase TMX3 isoform X2"
                     /calculated_mol_wt=27898
     Region          28..131
                     /region_name="PDI_a_TMX3"
                     /note="PDIa family, TMX3 subfamily; composed of eukaryotic
                     proteins similar to human TMX3, a TRX related
                     transmembrane protein containing one redox active TRX
                     domain at the N-terminus and a classical ER retrieval
                     sequence for type I transmembrane proteins at...; cd03000"
                     /db_xref="CDD:239298"
     Site            order(54,57,118)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239298"
     Region          161..>243
                     /region_name="Thioredoxin_6"
                     /note="Thioredoxin-like domain; pfam13848"
                     /db_xref="CDD:463999"
     CDS             1..247
                     /gene="TMX3"
                     /coded_by="XM_041472812.1:14..757"
                     /db_xref="GeneID:121356431"
ORIGIN      
        1 maaapggrpr cllwaavvah vvasgagfve dldesfkenr kddiwlvdfy apwcghckkl
       61 epvwnevgie mrnmgspvkv gkmdatsfss iasefgvrgy ptikllkgdl aynyrgprtk
      121 ddiiefanrv agplirplps qhmfehvqkr hrvlfvyvgg esplkekyie vaselivyty
      181 ffsasedvlp eyvtlpelpa vmvfkdgtyf vydeyedgdl sswinrerfq gylhvdgftl
      241 yelgdtd
//
LOCUS       XP_041328762            2230 aa            linear   VRT 06-MAY-2021
DEFINITION  rotatin [Pyrgilauda ruficollis].
ACCESSION   XP_041328762
VERSION     XP_041328762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2230
                     /product="rotatin"
                     /calculated_mol_wt=247710
     Region          16..112
                     /region_name="RTTN_N"
                     /note="Rotatin, an armadillo repeat protein, centriole
                     functioning; pfam14726"
                     /db_xref="CDD:464283"
     CDS             1..2230
                     /gene="RTTN"
                     /coded_by="XM_041472828.1:39..6731"
                     /db_xref="GeneID:121356438"
ORIGIN      
        1 melsalvrkl ghelteirer slktilfkld hnlisyadli hekalfrnll ewfnfpvvpi
       61 keevlnfvns likhppaaqk migigaveff sqlrsdvdpn lqaiidgivd rlfflsselp
      121 stssvcyqaq sqpsadqpvl pqeelftgyf cqsrshlpql eispkrtvvk clkfstfpwl
      181 tltstdrhvl ssnesslrsn nqsliwstce llqdvimqdf paeiflqrpk ivqsllslln
      241 lafggdgrhq lalqavsclq qlciflrsrl nfhrdpsfss seqgtasqns sisycqearg
      301 aprsqnpspg sssprpsvig rtvqrprgdg qdwdavsssg nstqanansr islhspfdvg
      361 hidlpdtene dtlelqmkql slpqfcvsil enaipllrig srrvtmevle llledmslig
      421 daisenvwed dslfalelkd klllvlgllg etilyhksni saeqpkvmlv hhrmafisis
      481 lftvrllqvl lpvekaskvt qksllnalfl lsldmsfsle ypsvhesvaa yleqmsteny
      541 siykqvseaa ysiectcsfm veahkegdkn lselleladq alsslpfhlh fpllqecihi
      601 csniwksaea nsllqvegqk lllhllshpl lnikaeayhc clevvkdclg ihniakpvps
      661 vcqgvhfllh pkvlyeictf glqedknevn stakailihl lqgrlmmevm twnkfiealc
      721 pvipvlqgya dtkdtlgkci lslsetttdk gegilpgtpr lqaalrllfs kkqqvrsvaa
      781 khlafhvlse eganlkrpcl dgnvlssisn lfiiegamel klddkmnsii kaetveklyd
      841 iltsdavdlv lrksaaeqlv viledtkmhd ilkklgviek ilaylnecvh vdgklmesiv
      901 vpcltllrki vcadpvvrls laqqpsllll lfrvslilqs dravltettv llclllfdev
      961 artetwadgi asnnaevpaf slpvavvrry hlpvritahh vvspntvvvp lsseclamkp
     1021 vadmlktawn lswyhgienl lqlvnyeket erfldslkls sedililkit htnhglqdcl
     1081 sliiqaashr dvrtaltrls fyvlndrlal kcssgpcgtt lksfvwqkam nrflqvlpas
     1141 vedekllvdv lrflnkllre qksnlesdhl kwilksllkn qpksltdllv rpesqvqdev
     1201 detqaavrqr ldkelvrlfn lllvcsmsvt dreglelags frtelalkll qclrltdaph
     1261 fyglpslert lqgmvhvtal pgwstysaav epitickkyl tgllevissf yvewggnams
     1321 fmgkgvtkst vlcllhlshe mmaqandmdw islwslpyds geeqvlshlg lawlvplwvd
     1381 rdpevrftal gigsaltsle igcialaesc qnisgglwgt vinilldqse csmvrreaaf
     1441 ilqnllvipi ptedtkdciw qgpcvhdees glsqtgipal kallyhcqfy ehvnqmvkrc
     1501 ylgcymfdln sykedklsve kggitdfdds lslwkappsq rksshshsts etmilsasps
     1561 lgsvtelqat vpssasfipe tvadrltaqg qsdttitesp sqhdspmsaa lskqravvtp
     1621 allsavcsll hnllvvmpkd tgialqqthl lttlsslvsa nlvercilel kaplghrchi
     1681 ehvkaqvlll lqylssvsrl lkscllvdsq llsqdellkp llgntfrilt irpkdgldae
     1741 ltsvlhetwv dsfsllatll wksgqisfpa vtaalanhct avidtisdci hlsttypaly
     1801 vaslqflsvl lneegrkqlq dkqsvcqnlt isflldhtee cqapvtqlta liiqvcerks
     1861 skdvlkevat nallsllavs knaqkcalea dlidscienm khihaqlnld slkpgkaqrk
     1921 kednlikelr csmqllrncl fqneeckmaa lkahlvpvlh slwpwfladd ssmqialhll
     1981 cvytanypag ctslcwasgg qsslpsgrsa agnslmhyil klasyvsndn spvqqvvfcl
     2041 isnlalshdc kgiiqksnfl qnflslslpk gsnknsgnvs tlwlklllni sfgeegqqmi
     2101 mkingfldqi iemckykhks sqhlallilh nicfspankp kilgndqaia vlsdclesns
     2161 pavqrigaas lwallhnyqk akgilknpsi rrrideahss vkksspqpee nelhayhvkc
     2221 lenivqlldc
//
LOCUS       XP_041328777             534 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328777
VERSION     XP_041328777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="suppressor of cytokine signaling 6"
                     /calculated_mol_wt=59685
     Region          372..471
                     /region_name="SH2_SOCS6"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10387"
                     /db_xref="CDD:198250"
     Site            order(390,408,410,418,431)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198250"
     Site            order(441,443,460)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198250"
     Region          494..534
                     /region_name="SOCS_SOCS6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS6-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03740"
                     /db_xref="CDD:239709"
     Site            order(495..500,506,513,519,524)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239709"
     CDS             1..534
                     /gene="SOCS6"
                     /coded_by="XM_041472843.1:248..1852"
                     /db_xref="GeneID:121356441"
ORIGIN      
        1 mkkislktir ksfnlnkskd esdfvvvqqp slsefgkdds lfgscygkdl ascevnsede
       61 kggknrskse slmgtlkrrl sakqkqkgkg stpsvssadd dtfssssapi tfkdvraqrp
      121 lrstslrnhh ysptpwplrp tnseetcikm evkvkalvhs snpspalngv rkdfhdlqse
      181 nvfqeqtnal kstesqngdl hlhidehvpv viglmpqdyi qytvpldegm yplegsrsyc
      241 ldssspmevs tvssqvggna fhedesqvdq divvapdifv dqtvngllig ttgvmlqspr
      301 vnhsdvppls pllppmqnnq iqrnfnglng tdahvaesmr chlnfdpnta pgvgrvydsv
      361 qnsgpmvvts lteelkklak qgwywgpitr weaegklanv pdgsflvrds sddryllsls
      421 frshgktlht riehsngrfs fyeqpdvegh tsivdliehs irdsengafc ysrsrlpgsa
      481 typvrltnpv srfmqvrslq ylcrfvirqy tridliqklp lpnkmkdylq ekhy
//
LOCUS       XP_041328785             534 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328785
VERSION     XP_041328785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="suppressor of cytokine signaling 6"
                     /calculated_mol_wt=59685
     Region          372..471
                     /region_name="SH2_SOCS6"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10387"
                     /db_xref="CDD:198250"
     Site            order(390,408,410,418,431)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198250"
     Site            order(441,443,460)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198250"
     Region          494..534
                     /region_name="SOCS_SOCS6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS6-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03740"
                     /db_xref="CDD:239709"
     Site            order(495..500,506,513,519,524)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239709"
     CDS             1..534
                     /gene="SOCS6"
                     /coded_by="XM_041472851.1:357..1961"
                     /db_xref="GeneID:121356441"
ORIGIN      
        1 mkkislktir ksfnlnkskd esdfvvvqqp slsefgkdds lfgscygkdl ascevnsede
       61 kggknrskse slmgtlkrrl sakqkqkgkg stpsvssadd dtfssssapi tfkdvraqrp
      121 lrstslrnhh ysptpwplrp tnseetcikm evkvkalvhs snpspalngv rkdfhdlqse
      181 nvfqeqtnal kstesqngdl hlhidehvpv viglmpqdyi qytvpldegm yplegsrsyc
      241 ldssspmevs tvssqvggna fhedesqvdq divvapdifv dqtvngllig ttgvmlqspr
      301 vnhsdvppls pllppmqnnq iqrnfnglng tdahvaesmr chlnfdpnta pgvgrvydsv
      361 qnsgpmvvts lteelkklak qgwywgpitr weaegklanv pdgsflvrds sddryllsls
      421 frshgktlht riehsngrfs fyeqpdvegh tsivdliehs irdsengafc ysrsrlpgsa
      481 typvrltnpv srfmqvrslq ylcrfvirqy tridliqklp lpnkmkdylq ekhy
//
LOCUS       XP_041328795             534 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328795
VERSION     XP_041328795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="suppressor of cytokine signaling 6"
                     /calculated_mol_wt=59685
     Region          372..471
                     /region_name="SH2_SOCS6"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10387"
                     /db_xref="CDD:198250"
     Site            order(390,408,410,418,431)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198250"
     Site            order(441,443,460)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198250"
     Region          494..534
                     /region_name="SOCS_SOCS6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS6-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03740"
                     /db_xref="CDD:239709"
     Site            order(495..500,506,513,519,524)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239709"
     CDS             1..534
                     /gene="SOCS6"
                     /coded_by="XM_041472861.1:257..1861"
                     /db_xref="GeneID:121356441"
ORIGIN      
        1 mkkislktir ksfnlnkskd esdfvvvqqp slsefgkdds lfgscygkdl ascevnsede
       61 kggknrskse slmgtlkrrl sakqkqkgkg stpsvssadd dtfssssapi tfkdvraqrp
      121 lrstslrnhh ysptpwplrp tnseetcikm evkvkalvhs snpspalngv rkdfhdlqse
      181 nvfqeqtnal kstesqngdl hlhidehvpv viglmpqdyi qytvpldegm yplegsrsyc
      241 ldssspmevs tvssqvggna fhedesqvdq divvapdifv dqtvngllig ttgvmlqspr
      301 vnhsdvppls pllppmqnnq iqrnfnglng tdahvaesmr chlnfdpnta pgvgrvydsv
      361 qnsgpmvvts lteelkklak qgwywgpitr weaegklanv pdgsflvrds sddryllsls
      421 frshgktlht riehsngrfs fyeqpdvegh tsivdliehs irdsengafc ysrsrlpgsa
      481 typvrltnpv srfmqvrslq ylcrfvirqy tridliqklp lpnkmkdylq ekhy
//
LOCUS       XP_041328803             534 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328803
VERSION     XP_041328803.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472869.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="suppressor of cytokine signaling 6"
                     /calculated_mol_wt=59685
     Region          372..471
                     /region_name="SH2_SOCS6"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10387"
                     /db_xref="CDD:198250"
     Site            order(390,408,410,418,431)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198250"
     Site            order(441,443,460)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198250"
     Region          494..534
                     /region_name="SOCS_SOCS6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS6-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03740"
                     /db_xref="CDD:239709"
     Site            order(495..500,506,513,519,524)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239709"
     CDS             1..534
                     /gene="SOCS6"
                     /coded_by="XM_041472869.1:315..1919"
                     /db_xref="GeneID:121356441"
ORIGIN      
        1 mkkislktir ksfnlnkskd esdfvvvqqp slsefgkdds lfgscygkdl ascevnsede
       61 kggknrskse slmgtlkrrl sakqkqkgkg stpsvssadd dtfssssapi tfkdvraqrp
      121 lrstslrnhh ysptpwplrp tnseetcikm evkvkalvhs snpspalngv rkdfhdlqse
      181 nvfqeqtnal kstesqngdl hlhidehvpv viglmpqdyi qytvpldegm yplegsrsyc
      241 ldssspmevs tvssqvggna fhedesqvdq divvapdifv dqtvngllig ttgvmlqspr
      301 vnhsdvppls pllppmqnnq iqrnfnglng tdahvaesmr chlnfdpnta pgvgrvydsv
      361 qnsgpmvvts lteelkklak qgwywgpitr weaegklanv pdgsflvrds sddryllsls
      421 frshgktlht riehsngrfs fyeqpdvegh tsivdliehs irdsengafc ysrsrlpgsa
      481 typvrltnpv srfmqvrslq ylcrfvirqy tridliqklp lpnkmkdylq ekhy
//
LOCUS       XP_041328813             534 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328813
VERSION     XP_041328813.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472879.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="suppressor of cytokine signaling 6"
                     /calculated_mol_wt=59685
     Region          372..471
                     /region_name="SH2_SOCS6"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10387"
                     /db_xref="CDD:198250"
     Site            order(390,408,410,418,431)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198250"
     Site            order(441,443,460)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198250"
     Region          494..534
                     /region_name="SOCS_SOCS6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS6-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03740"
                     /db_xref="CDD:239709"
     Site            order(495..500,506,513,519,524)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239709"
     CDS             1..534
                     /gene="SOCS6"
                     /coded_by="XM_041472879.1:243..1847"
                     /db_xref="GeneID:121356441"
ORIGIN      
        1 mkkislktir ksfnlnkskd esdfvvvqqp slsefgkdds lfgscygkdl ascevnsede
       61 kggknrskse slmgtlkrrl sakqkqkgkg stpsvssadd dtfssssapi tfkdvraqrp
      121 lrstslrnhh ysptpwplrp tnseetcikm evkvkalvhs snpspalngv rkdfhdlqse
      181 nvfqeqtnal kstesqngdl hlhidehvpv viglmpqdyi qytvpldegm yplegsrsyc
      241 ldssspmevs tvssqvggna fhedesqvdq divvapdifv dqtvngllig ttgvmlqspr
      301 vnhsdvppls pllppmqnnq iqrnfnglng tdahvaesmr chlnfdpnta pgvgrvydsv
      361 qnsgpmvvts lteelkklak qgwywgpitr weaegklanv pdgsflvrds sddryllsls
      421 frshgktlht riehsngrfs fyeqpdvegh tsivdliehs irdsengafc ysrsrlpgsa
      481 typvrltnpv srfmqvrslq ylcrfvirqy tridliqklp lpnkmkdylq ekhy
//
LOCUS       XP_041328822             534 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328822
VERSION     XP_041328822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472888.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="suppressor of cytokine signaling 6"
                     /calculated_mol_wt=59685
     Region          372..471
                     /region_name="SH2_SOCS6"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10387"
                     /db_xref="CDD:198250"
     Site            order(390,408,410,418,431)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198250"
     Site            order(441,443,460)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198250"
     Region          494..534
                     /region_name="SOCS_SOCS6"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS6-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03740"
                     /db_xref="CDD:239709"
     Site            order(495..500,506,513,519,524)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239709"
     CDS             1..534
                     /gene="SOCS6"
                     /coded_by="XM_041472888.1:233..1837"
                     /db_xref="GeneID:121356441"
ORIGIN      
        1 mkkislktir ksfnlnkskd esdfvvvqqp slsefgkdds lfgscygkdl ascevnsede
       61 kggknrskse slmgtlkrrl sakqkqkgkg stpsvssadd dtfssssapi tfkdvraqrp
      121 lrstslrnhh ysptpwplrp tnseetcikm evkvkalvhs snpspalngv rkdfhdlqse
      181 nvfqeqtnal kstesqngdl hlhidehvpv viglmpqdyi qytvpldegm yplegsrsyc
      241 ldssspmevs tvssqvggna fhedesqvdq divvapdifv dqtvngllig ttgvmlqspr
      301 vnhsdvppls pllppmqnnq iqrnfnglng tdahvaesmr chlnfdpnta pgvgrvydsv
      361 qnsgpmvvts lteelkklak qgwywgpitr weaegklanv pdgsflvrds sddryllsls
      421 frshgktlht riehsngrfs fyeqpdvegh tsivdliehs irdsengafc ysrsrlpgsa
      481 typvrltnpv srfmqvrslq ylcrfvirqy tridliqklp lpnkmkdylq ekhy
//
LOCUS       XP_041328835             331 aa            linear   VRT 06-MAY-2021
DEFINITION  docking protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041328835
VERSION     XP_041328835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="docking protein 6"
                     /calculated_mol_wt=38042
     Region          9..113
                     /region_name="PH_DOK4_DOK5_DOK6"
                     /note="Pleckstrin homology (PH) domain of Downstream of
                     tyrosine kinase 4, 5, and 6 proteins; cd14678"
                     /db_xref="CDD:270197"
     Region          133..235
                     /region_name="PTB_DOK4_DOK5_DOK6"
                     /note="Downstream of tyrosine kinase 4, 5, and 6 proteins
                     phosphotyrosine-binding domain (PTBi); cd13164"
                     /db_xref="CDD:241318"
     Site            order(184..189,195,199..200,210,223)
                     /site_type="other"
                     /note="putative phosphopeptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:241318"
     CDS             1..331
                     /gene="DOK6"
                     /coded_by="XM_041472901.1:215..1210"
                     /db_xref="GeneID:121356460"
ORIGIN      
        1 masnfndivk qgyvkirsrk lgifrrcwlv fkkasskgpr rlekfpdeka ayfrnfhkvt
       61 elhniknitr lpretkkhav aiifhdetsk tfaceselea eewckhlcme clgarlndis
      121 lgepdllaag vqreqnerfn vylmptpnld iygectmqit heniylwdih nakvklvmwp
      181 lsslrrygrd stwftfesgr mcdtgeglft fqtregemiy qkvhsatlai aeqherlmme
      241 meqkarlqts lsepmtlsks islprsaywh hitrqnsvge iyslqghslg sakvsraqtf
      301 psypseqgee hqqplslass yafsygsglv q
//
LOCUS       XP_041328849            1216 aa            linear   VRT 06-MAY-2021
DEFINITION  dermatan-sulfate epimerase-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041328849
VERSION     XP_041328849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1216
                     /product="dermatan-sulfate epimerase-like protein"
                     /calculated_mol_wt=139285
     Region          <1081..1155
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; cl46325"
                     /db_xref="CDD:480665"
     CDS             1..1216
                     /gene="DSEL"
                     /coded_by="XM_041472915.1:1288..4938"
                     /db_xref="GeneID:121356466"
ORIGIN      
        1 malmftghtl flalmvfdvf tfeesvsnys dwvtfienvd qyekqqlegl saeqklkrtv
       61 lhpslyfdpq dvqalrqkar tshlhlfrai rsavmvmlsn plyylpppkh idfaakwnei
      121 ygnnlpplaf ycllcpedka afdfaleymd rmagyknwlv enapgdevpl ghsltgfata
      181 fdflynslen grrqkyleki wsvseemyey skvrswgkql lhnhqatnml alligalvag
      241 vdkgsqaniw khtvvdvmek tmfllnhivd gsldegvayg sytaksvtqy vflaqrhfgi
      301 nnlennwlkm hfwfyyatll pgfqrtvgva dsnynwfygp esqlvfldkf imkngagnwl
      361 aqqirkhrpk dgpmvpstaq rwstlhtefi wyaaeitpqp ppdygtakmh vfpnwgvvty
      421 gaglpnsqtn tfvsfksgkl ggravydivh fqpyrwidgw rsfnpghehp dqnsftfapn
      481 gqvfvsealy gpklshlnnv lvfapsptsq cnqpwegqlg ecaqwlkwmg devgdstgei
      541 itasqagemm fvsgeavsay tstmklksvy rvllllnsqt llvvdhieke edspvnsvsa
      601 ffhnldidfk yipykfknky ngammdvwda hykmfwfdhr gsspvariqe aeqaaefkkr
      661 wtqfvnvtfp mknmltrivy lfygpyvnvs ncrfmdnaks gfqislnvnn tentisvvte
      721 yqnlkarfdy lgfggfakvv henkvtkfgl gtesvkkdik nnrvvfpfgf kvniiaglil
      781 avslvilafq wrfylsfgkm lrwililvvt lwlvelvdvw smctqpicak wsadvtrleg
      841 dkgnkakkle gnpvvlpdvi itslptsgae ilkqlffnts dflyiripth yleipetefe
      901 idsfvdpcew kvsdvqngnf rlirgwlqsl vqdtklhlqn ihlyeasrsk itqhsalskd
      961 kkkrskkres lleqrsrarg sqekdaeyir elrkhlvyyp narpvlslts gswtlklpff
     1021 qeilgpsmra lyvvrdpraw vysmlyknkp slyslknipq rlaamfkeen gkekcslneg
     1081 yasefeslrk eisnsnsnai svlshlwlan taaamrinrd llptnyqlvk fedivsfpqk
     1141 taeaifaflg iplppaslnq ilfatstslf ylpyegeisp ssihawkqnm pheeirqied
     1201 iccalmdhlg ypkfie
//
LOCUS       XP_041328864             373 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 102B [Pyrgilauda ruficollis].
ACCESSION   XP_041328864
VERSION     XP_041328864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="coiled-coil domain-containing protein 102B"
                     /calculated_mol_wt=44111
     CDS             1..373
                     /gene="CCDC102B"
                     /coded_by="XM_041472930.1:204..1325"
                     /db_xref="GeneID:121356471"
ORIGIN      
        1 mmnqnmnlds iqkqmeeiei fgnqptqpde ldrcwqpgdh lfhsnlppqs fypnsphyah
       61 mhtsfssdwe ifeavkiqel eevkaraaqm ektmrwwsdc tanwrekwsk vrgernkare
      121 earqlrikld svikelsmlk kinqdlisek enlengtawk mecccsetsc ikkdqsllmf
      181 leperlkdlm kittipgaed tkkdvnkdqs ndnkkvttkp pnflpnglps iyledpkisl
      241 gttakttend lihasvlnlh laemrkilqk eremnvflek emekmenelf lwkwkyeelr
      301 qtkleslkkm ervrcenase wgkrerlgae kqsleeetrk lkmqskeaeg sqhriwdqtk
      361 flvccwrfyh dse
//
LOCUS       XP_041321696              92 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321696
VERSION     XP_041321696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518114.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>92
                     /product="WAS/WASL-interacting protein family member
                     1-like"
     CDS             1..92
                     /gene="LOC121352636"
                     /coded_by="XM_041465762.1:<1..>276"
                     /db_xref="GeneID:121352636"
ORIGIN      
        1 sgprtaapdp qrsrvppprp dagskpeaap ppvpstprpi asslhnrgsp pvpglsrqps
       61 lgpspppfpg srgsgsaapl rqpgpgaasp fs
//
LOCUS       XP_041321697             166 aa            linear   VRT 06-MAY-2021
DEFINITION  PDZ domain-containing protein GIPC1-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321697
VERSION     XP_041321697.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465763.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518174.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 40% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>166
                     /product="PDZ domain-containing protein GIPC1-like"
     Region          35..>107
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Region          144..>166
                     /region_name="GH2_like"
                     /note="GIPC homology 2 (GH2) domain-like family; cl41749"
                     /db_xref="CDD:425380"
     CDS             1..166
                     /gene="LOC121352637"
                     /coded_by="XM_041465763.1:<1..>499"
                     /db_xref="GeneID:121352637"
ORIGIN      
        1 psevlfctln tpqvdmekll ggqigledfi fahtrgrqkd vqvlkseeal gltitdngag
       61 yafikvrhtw pelgltitdn gagyafikri hegsvmartp qvlprrhrfq lqltepwrdw
      121 gadpktspet pklamlqeqp safeeravak vddllesymg irdsel
//
LOCUS       XP_041321698             161 aa            linear   VRT 06-MAY-2021
DEFINITION  helix-loop-helix protein 13-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321698
VERSION     XP_041321698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..161
                     /product="helix-loop-helix protein 13-like"
                     /calculated_mol_wt=18205
     Region          65..123
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(73..74,76,81,101..102)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381422"
     Site            order(79..80,83..84,86..87,91,102..103,106..107,110,
                     112..113,116..117)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381422"
     CDS             1..161
                     /gene="LOC121352638"
                     /coded_by="XM_041465764.1:1..486"
                     /db_xref="GeneID:121352638"
ORIGIN      
        1 meelcysfee gdptaesllw eppdpdtqle nflleclaep srtepggael dkcpvppepp
       61 gqprqrraan lrerrrmlsi naafeelrgr vptfpyerrl skidtlrlai ayiallgdil
      121 lsgchpkayv eqclrsgars pqrlawntsd ltarlswvkw d
//
LOCUS       XP_041321699            1102 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321699
VERSION     XP_041321699.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465765.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1102
                     /product="histone deacetylase 4 isoform X1"
                     /calculated_mol_wt=121561
     Region          <104..165
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(106,110,121..122,125,132,136..137)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          667..1075
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(820..821,829..830,858,860,952,992)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1102
                     /gene="HDAC4"
                     /coded_by="XM_041465765.1:59..3367"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mvrtllcsrs prssaggclp dglsgrdqpv ellnpprvnh mpssvdvsta lplqvapssv
       61 pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq iliaefqrqh eqlsrqheaq
      121 lhehikqqqe mlamkhqqel lehqrkleqh rqeqelekqh reqklqqlkn kekgkesava
      181 stevkmklqe fvlnkkkala hrnlnhciss dprfwygktq hssldqsspp qsgvsgtynh
      241 pvlgmydskd dfplrktase pnlklrsrlk qkvaerrssp llrrkdgpvv talkkrpldv
      301 tgtadsacns apgsgpsspn nssnnisten giagsvtsiq aetslahrlv nregsvtqlp
      361 lytspslpni tlglpatgps sagqaqqdae rlaipalqqr islfpgthlt pylstttler
      421 dggtahnpll qhmvlleqpt aqtplvtdwy lsglplhaqp lvggdrvsps ihklrqhrpl
      481 grtqsaplpq naqalqqlvi qqqhqqflek hkqqfqqqql hinkiiskpt eparqheshp
      541 eeteeelreh qalleepyge ratgqkepag lasvvqvkqe piesdeeeae aqqelepgqr
      601 qaeqellfrq qallleqqri hqlrnyqasl eaagmpvsfg ghrplsraqs spasatfpms
      661 vqepptkprf ttglvydtlm lkhqctcgnt nshpehagri qsiwsrlqet glrgkcecir
      721 grkatleelq tvhseahtll ygtnplnrqk ldskkllgsl tsmfvrlpcg gvgvdsdtiw
      781 nevhssgaar lavgcvielv fkvatgelkn gfavvrppgh haeestpmgf cyfnsvaiaa
      841 kllqqrlnvs kilivdwdvh hgngtqqafy ndpnvlyisl hryddgnffp gsgapdevgt
      901 gagvgfnvnm aftggldppm gdteyltafr tvvmpianef apdvvlvssg fdaveghptp
      961 lggynlsakc fgyltkqlmg laggrvvlal egghdltaic daseacvsal lgneldplpe
     1021 kvfqqranan avhsmekvie ihskywhslq rfastvgysl veaqkcenee aetvtamasl
     1081 svgvkpaekr pedepmeeep pl
//
LOCUS       XP_041321700            1101 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321700
VERSION     XP_041321700.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465766.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1101
                     /product="histone deacetylase 4 isoform X2"
                     /calculated_mol_wt=121433
     Region          <104..164
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(106,110,121..122,125,131,135..136)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          666..1074
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(819..820,828..829,857,859,951,991)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1101
                     /gene="HDAC4"
                     /coded_by="XM_041465766.1:59..3364"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mvrtllcsrs prssaggclp dglsgrdqpv ellnpprvnh mpssvdvsta lplqvapssv
       61 pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq iliaefqrqh eqlsrqheaq
      121 lhehikqqem lamkhqqell ehqrkleqhr qeqelekqhr eqklqqlknk ekgkesavas
      181 tevkmklqef vlnkkkalah rnlnhcissd prfwygktqh ssldqssppq sgvsgtynhp
      241 vlgmydskdd fplrktasep nlklrsrlkq kvaerrsspl lrrkdgpvvt alkkrpldvt
      301 gtadsacnsa pgsgpsspnn ssnnisteng iagsvtsiqa etslahrlvn regsvtqlpl
      361 ytspslpnit lglpatgpss agqaqqdaer laipalqqri slfpgthltp ylstttlerd
      421 ggtahnpllq hmvlleqpta qtplvtdwyl sglplhaqpl vggdrvspsi hklrqhrplg
      481 rtqsaplpqn aqalqqlviq qqhqqflekh kqqfqqqqlh inkiiskpte parqheshpe
      541 eteeelrehq alleepyger atgqkepagl asvvqvkqep iesdeeeaea qqelepgqrq
      601 aeqellfrqq allleqqrih qlrnyqasle aagmpvsfgg hrplsraqss pasatfpmsv
      661 qepptkprft tglvydtlml khqctcgntn shpehagriq siwsrlqetg lrgkcecirg
      721 rkatleelqt vhseahtlly gtnplnrqkl dskkllgslt smfvrlpcgg vgvdsdtiwn
      781 evhssgaarl avgcvielvf kvatgelkng favvrppghh aeestpmgfc yfnsvaiaak
      841 llqqrlnvsk ilivdwdvhh gngtqqafyn dpnvlyislh ryddgnffpg sgapdevgtg
      901 agvgfnvnma ftggldppmg dteyltafrt vvmpianefa pdvvlvssgf daveghptpl
      961 ggynlsakcf gyltkqlmgl aggrvvlale gghdltaicd aseacvsall gneldplpek
     1021 vfqqranana vhsmekviei hskywhslqr fastvgyslv eaqkceneea etvtamasls
     1081 vgvkpaekrp edepmeeepp l
//
LOCUS       XP_041321701            1099 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321701
VERSION     XP_041321701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465767.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1099
                     /product="histone deacetylase 4 isoform X3"
                     /calculated_mol_wt=121332
     Region          <104..165
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(106,110,121..122,125,132,136..137)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          664..1072
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(817..818,826..827,855,857,949,989)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1099
                     /gene="HDAC4"
                     /coded_by="XM_041465767.1:59..3358"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mvrtllcsrs prssaggclp dglsgrdqpv ellnpprvnh mpssvdvsta lplqvapssv
       61 pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq iliaefqrqh eqlsrqheaq
      121 lhehikqqqe mlamkhqqel lehqrkleqh rqeqelekqh reqklqqlkn kekgkesava
      181 stevkmklqe fvlnkkkala hrnlnhciss dprfwygktq hssldqsspp qsgvsgtynh
      241 pvlgmydskd dfplrktase pnlklrsrlk qkvaerrssp llrrkdgpvv talkkrpldv
      301 tdsacnsapg sgpsspnnss nnistengia gsvtsiqaet slahrlvnre gsvtqlplyt
      361 spslpnitlg lpatgpssag qaqqdaerla ipalqqrisl fpgthltpyl stttlerdgg
      421 tahnpllqhm vlleqptaqt plvtdwylsg lplhaqplvg gdrvspsihk lrqhrplgrt
      481 qsaplpqnaq alqqlviqqq hqqflekhkq qfqqqqlhin kiiskptepa rqheshpeet
      541 eeelrehqal leepygerat gqkepaglas vvqvkqepie sdeeeaeaqq elepgqrqae
      601 qellfrqqal lleqqrihql rnyqasleaa gmpvsfgghr plsraqsspa satfpmsvqe
      661 pptkprfttg lvydtlmlkh qctcgntnsh pehagriqsi wsrlqetglr gkcecirgrk
      721 atleelqtvh seahtllygt nplnrqklds kkllgsltsm fvrlpcggvg vdsdtiwnev
      781 hssgaarlav gcvielvfkv atgelkngfa vvrppghhae estpmgfcyf nsvaiaakll
      841 qqrlnvskil ivdwdvhhgn gtqqafyndp nvlyislhry ddgnffpgsg apdevgtgag
      901 vgfnvnmaft ggldppmgdt eyltafrtvv mpianefapd vvlvssgfda veghptplgg
      961 ynlsakcfgy ltkqlmglag grvvlalegg hdltaicdas eacvsallgn eldplpekvf
     1021 qqrananavh smekvieihs kywhslqrfa stvgyslvea qkceneeaet vtamaslsvg
     1081 vkpaekrped epmeeeppl
//
LOCUS       XP_041321702            1097 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321702
VERSION     XP_041321702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1097
                     /product="histone deacetylase 4 isoform X4"
                     /calculated_mol_wt=120896
     Region          <104..165
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(106,110,121..122,125,132,136..137)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          662..1070
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(815..816,824..825,853,855,947,987)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1097
                     /gene="HDAC4"
                     /coded_by="XM_041465768.1:59..3352"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mvrtllcsrs prssaggclp dglsgrdqpv ellnpprvnh mpssvdvsta lplqvapssv
       61 pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq iliaefqrqh eqlsrqheaq
      121 lhehikqqqe mlamkhqqel lehqrkleqh rqeqelekqh reqklqqlkn kekgkesava
      181 stevkmklqe fvlnkkkala hrnlnhciss dprfwygktq hssldqsspp qsgvsgtynh
      241 pvlgmydskd dfplrktase pnlklrsrlk qkvaerrssp llrrkdgpvv talkkrpldv
      301 tgtadsacns apgsgpsspn nssnnisten giagsvtsiq aetslahrlv nregsvtqlp
      361 lytspslpni tlglpatgps sagqaqqdae rlaipalqqr islfpgthlt pylstttler
      421 dggtahnpll qhmvlleqpt aqtplvtglp lhaqplvggd rvspsihklr qhrplgrtqs
      481 aplpqnaqal qqlviqqqhq qflekhkqqf qqqqlhinki iskpteparq heshpeetee
      541 elrehqalle epygeratgq kepaglasvv qvkqepiesd eeeaeaqqel epgqrqaeqe
      601 llfrqqalll eqqrihqlrn yqasleaagm pvsfgghrpl sraqsspasa tfpmsvqepp
      661 tkprfttglv ydtlmlkhqc tcgntnshpe hagriqsiws rlqetglrgk cecirgrkat
      721 leelqtvhse ahtllygtnp lnrqkldskk llgsltsmfv rlpcggvgvd sdtiwnevhs
      781 sgaarlavgc vielvfkvat gelkngfavv rppghhaees tpmgfcyfns vaiaakllqq
      841 rlnvskiliv dwdvhhgngt qqafyndpnv lyislhrydd gnffpgsgap devgtgagvg
      901 fnvnmaftgg ldppmgdtey ltafrtvvmp ianefapdvv lvssgfdave ghptplggyn
      961 lsakcfgylt kqlmglaggr vvlalegghd ltaicdasea cvsallgnel dplpekvfqq
     1021 rananavhsm ekvieihsky whslqrfast vgyslveaqk ceneeaetvt amaslsvgvk
     1081 paekrpedep meeeppl
//
LOCUS       XP_041321703            1094 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041321703
VERSION     XP_041321703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1094
                     /product="histone deacetylase 4 isoform X5"
                     /calculated_mol_wt=120667
     Region          <104..165
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(106,110,121..122,125,132,136..137)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          659..1067
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(812..813,821..822,850,852,944,984)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1094
                     /gene="HDAC4"
                     /coded_by="XM_041465769.1:59..3343"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mvrtllcsrs prssaggclp dglsgrdqpv ellnpprvnh mpssvdvsta lplqvapssv
       61 pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq iliaefqrqh eqlsrqheaq
      121 lhehikqqqe mlamkhqqel lehqrkleqh rqeqelekqh reqklqqlkn kekgkesava
      181 stevkmklqe fvlnkkkala hrnlnhciss dprfwygktq hssldqsspp qsgvsgtynh
      241 pvlgmydskd dfplrktase pnlklrsrlk qkvaerrssp llrrkdgpvv talkkrpldv
      301 tdsacnsapg sgpsspnnss nnistengia gsvtsiqaet slahrlvnre gsvtqlplyt
      361 spslpnitlg lpatgpssag qaqqdaerla ipalqqrisl fpgthltpyl stttlerdgg
      421 tahnpllqhm vlleqptaqt plvtglplha qplvggdrvs psihklrqhr plgrtqsapl
      481 pqnaqalqql viqqqhqqfl ekhkqqfqqq qlhinkiisk pteparqhes hpeeteeelr
      541 ehqalleepy geratgqkep aglasvvqvk qepiesdeee aeaqqelepg qrqaeqellf
      601 rqqallleqq rihqlrnyqa sleaagmpvs fgghrplsra qsspasatfp msvqepptkp
      661 rfttglvydt lmlkhqctcg ntnshpehag riqsiwsrlq etglrgkcec irgrkatlee
      721 lqtvhseaht llygtnplnr qkldskkllg sltsmfvrlp cggvgvdsdt iwnevhssga
      781 arlavgcvie lvfkvatgel kngfavvrpp ghhaeestpm gfcyfnsvai aakllqqrln
      841 vskilivdwd vhhgngtqqa fyndpnvlyi slhryddgnf fpgsgapdev gtgagvgfnv
      901 nmaftggldp pmgdteylta frtvvmpian efapdvvlvs sgfdaveghp tplggynlsa
      961 kcfgyltkql mglaggrvvl alegghdlta icdaseacvs allgneldpl pekvfqqran
     1021 anavhsmekv ieihskywhs lqrfastvgy slveaqkcen eeaetvtama slsvgvkpae
     1081 krpedepmee eppl
//
LOCUS       XP_041321704            1093 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321704
VERSION     XP_041321704.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465770.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1093
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1093
                     /product="histone deacetylase 4 isoform X6"
                     /calculated_mol_wt=120539
     Region          <104..164
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(106,110,121..122,125,131,135..136)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          658..1066
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(811..812,820..821,849,851,943,983)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1093
                     /gene="HDAC4"
                     /coded_by="XM_041465770.1:59..3340"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mvrtllcsrs prssaggclp dglsgrdqpv ellnpprvnh mpssvdvsta lplqvapssv
       61 pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq iliaefqrqh eqlsrqheaq
      121 lhehikqqem lamkhqqell ehqrkleqhr qeqelekqhr eqklqqlknk ekgkesavas
      181 tevkmklqef vlnkkkalah rnlnhcissd prfwygktqh ssldqssppq sgvsgtynhp
      241 vlgmydskdd fplrktasep nlklrsrlkq kvaerrsspl lrrkdgpvvt alkkrpldvt
      301 dsacnsapgs gpsspnnssn nistengiag svtsiqaets lahrlvnreg svtqlplyts
      361 pslpnitlgl patgpssagq aqqdaerlai palqqrislf pgthltpyls tttlerdggt
      421 ahnpllqhmv lleqptaqtp lvtglplhaq plvggdrvsp sihklrqhrp lgrtqsaplp
      481 qnaqalqqlv iqqqhqqfle khkqqfqqqq lhinkiiskp teparqhesh peeteeelre
      541 hqalleepyg eratgqkepa glasvvqvkq epiesdeeea eaqqelepgq rqaeqellfr
      601 qqallleqqr ihqlrnyqas leaagmpvsf gghrplsraq sspasatfpm svqepptkpr
      661 fttglvydtl mlkhqctcgn tnshpehagr iqsiwsrlqe tglrgkceci rgrkatleel
      721 qtvhseahtl lygtnplnrq kldskkllgs ltsmfvrlpc ggvgvdsdti wnevhssgaa
      781 rlavgcviel vfkvatgelk ngfavvrppg hhaeestpmg fcyfnsvaia akllqqrlnv
      841 skilivdwdv hhgngtqqaf yndpnvlyis lhryddgnff pgsgapdevg tgagvgfnvn
      901 maftggldpp mgdteyltaf rtvvmpiane fapdvvlvss gfdaveghpt plggynlsak
      961 cfgyltkqlm glaggrvvla legghdltai cdaseacvsa llgneldplp ekvfqqrana
     1021 navhsmekvi eihskywhsl qrfastvgys lveaqkcene eaetvtamas lsvgvkpaek
     1081 rpedepmeee ppl
//
LOCUS       XP_041321706            1089 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041321706
VERSION     XP_041321706.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465772.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1089
                     /product="histone deacetylase 4 isoform X7"
                     /calculated_mol_wt=120242
     Region          <91..152
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(93,97,108..109,112,119,123..124)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          654..1062
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(807..808,816..817,845,847,939,979)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1089
                     /gene="HDAC4"
                     /coded_by="XM_041465772.1:365..3634"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mssqshpdgl sgrdqpvell npprvnhmps svdvstalpl qvapssvpmd lrldhqfsmp
       61 vteptlreqq lqqellalkq kqqiqrqili aefqrqheql srqheaqlhe hikqqqemla
      121 mkhqqelleh qrkleqhrqe qelekqhreq klqqlknkek gkesavaste vkmklqefvl
      181 nkkkalahrn lnhcissdpr fwygktqhss ldqssppqsg vsgtynhpvl gmydskddfp
      241 lrktasepnl klrsrlkqkv aerrsspllr rkdgpvvtal kkrpldvtgt adsacnsapg
      301 sgpsspnnss nnistengia gsvtsiqaet slahrlvnre gsvtqlplyt spslpnitlg
      361 lpatgpssag qaqqdaerla ipalqqrisl fpgthltpyl stttlerdgg tahnpllqhm
      421 vlleqptaqt plvtdwylsg lplhaqplvg gdrvspsihk lrqhrplgrt qsaplpqnaq
      481 alqqlviqqq hqqflekhkq qfqqqqlhin kiiskptepa rqheshpeet eeelrehqal
      541 leepygerat gqkepaglas vvqvkqepie sdeeeaeaqq elepgqrqae qellfrqqal
      601 lleqqrihql rnyqasleaa gmpvsfgghr plsraqsspa satfpmsvqe pptkprfttg
      661 lvydtlmlkh qctcgntnsh pehagriqsi wsrlqetglr gkcecirgrk atleelqtvh
      721 seahtllygt nplnrqklds kkllgsltsm fvrlpcggvg vdsdtiwnev hssgaarlav
      781 gcvielvfkv atgelkngfa vvrppghhae estpmgfcyf nsvaiaakll qqrlnvskil
      841 ivdwdvhhgn gtqqafyndp nvlyislhry ddgnffpgsg apdevgtgag vgfnvnmaft
      901 ggldppmgdt eyltafrtvv mpianefapd vvlvssgfda veghptplgg ynlsakcfgy
      961 ltkqlmglag grvvlalegg hdltaicdas eacvsallgn eldplpekvf qqrananavh
     1021 smekvieihs kywhslqrfa stvgyslvea qkceneeaet vtamaslsvg vkpaekrped
     1081 epmeeeppl
//
LOCUS       XP_041321707            1089 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041321707
VERSION     XP_041321707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1089
                     /product="histone deacetylase 4 isoform X7"
                     /calculated_mol_wt=120242
     Region          <91..152
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(93,97,108..109,112,119,123..124)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          654..1062
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(807..808,816..817,845,847,939,979)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1089
                     /gene="HDAC4"
                     /coded_by="XM_041465773.1:437..3706"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mssqshpdgl sgrdqpvell npprvnhmps svdvstalpl qvapssvpmd lrldhqfsmp
       61 vteptlreqq lqqellalkq kqqiqrqili aefqrqheql srqheaqlhe hikqqqemla
      121 mkhqqelleh qrkleqhrqe qelekqhreq klqqlknkek gkesavaste vkmklqefvl
      181 nkkkalahrn lnhcissdpr fwygktqhss ldqssppqsg vsgtynhpvl gmydskddfp
      241 lrktasepnl klrsrlkqkv aerrsspllr rkdgpvvtal kkrpldvtgt adsacnsapg
      301 sgpsspnnss nnistengia gsvtsiqaet slahrlvnre gsvtqlplyt spslpnitlg
      361 lpatgpssag qaqqdaerla ipalqqrisl fpgthltpyl stttlerdgg tahnpllqhm
      421 vlleqptaqt plvtdwylsg lplhaqplvg gdrvspsihk lrqhrplgrt qsaplpqnaq
      481 alqqlviqqq hqqflekhkq qfqqqqlhin kiiskptepa rqheshpeet eeelrehqal
      541 leepygerat gqkepaglas vvqvkqepie sdeeeaeaqq elepgqrqae qellfrqqal
      601 lleqqrihql rnyqasleaa gmpvsfgghr plsraqsspa satfpmsvqe pptkprfttg
      661 lvydtlmlkh qctcgntnsh pehagriqsi wsrlqetglr gkcecirgrk atleelqtvh
      721 seahtllygt nplnrqklds kkllgsltsm fvrlpcggvg vdsdtiwnev hssgaarlav
      781 gcvielvfkv atgelkngfa vvrppghhae estpmgfcyf nsvaiaakll qqrlnvskil
      841 ivdwdvhhgn gtqqafyndp nvlyislhry ddgnffpgsg apdevgtgag vgfnvnmaft
      901 ggldppmgdt eyltafrtvv mpianefapd vvlvssgfda veghptplgg ynlsakcfgy
      961 ltkqlmglag grvvlalegg hdltaicdas eacvsallgn eldplpekvf qqrananavh
     1021 smekvieihs kywhslqrfa stvgyslvea qkceneeaet vtamaslsvg vkpaekrped
     1081 epmeeeppl
//
LOCUS       XP_041321708            1089 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041321708
VERSION     XP_041321708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1089
                     /product="histone deacetylase 4 isoform X7"
                     /calculated_mol_wt=120242
     Region          <91..152
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(93,97,108..109,112,119,123..124)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          654..1062
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(807..808,816..817,845,847,939,979)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1089
                     /gene="HDAC4"
                     /coded_by="XM_041465774.1:326..3595"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mssqshpdgl sgrdqpvell npprvnhmps svdvstalpl qvapssvpmd lrldhqfsmp
       61 vteptlreqq lqqellalkq kqqiqrqili aefqrqheql srqheaqlhe hikqqqemla
      121 mkhqqelleh qrkleqhrqe qelekqhreq klqqlknkek gkesavaste vkmklqefvl
      181 nkkkalahrn lnhcissdpr fwygktqhss ldqssppqsg vsgtynhpvl gmydskddfp
      241 lrktasepnl klrsrlkqkv aerrsspllr rkdgpvvtal kkrpldvtgt adsacnsapg
      301 sgpsspnnss nnistengia gsvtsiqaet slahrlvnre gsvtqlplyt spslpnitlg
      361 lpatgpssag qaqqdaerla ipalqqrisl fpgthltpyl stttlerdgg tahnpllqhm
      421 vlleqptaqt plvtdwylsg lplhaqplvg gdrvspsihk lrqhrplgrt qsaplpqnaq
      481 alqqlviqqq hqqflekhkq qfqqqqlhin kiiskptepa rqheshpeet eeelrehqal
      541 leepygerat gqkepaglas vvqvkqepie sdeeeaeaqq elepgqrqae qellfrqqal
      601 lleqqrihql rnyqasleaa gmpvsfgghr plsraqsspa satfpmsvqe pptkprfttg
      661 lvydtlmlkh qctcgntnsh pehagriqsi wsrlqetglr gkcecirgrk atleelqtvh
      721 seahtllygt nplnrqklds kkllgsltsm fvrlpcggvg vdsdtiwnev hssgaarlav
      781 gcvielvfkv atgelkngfa vvrppghhae estpmgfcyf nsvaiaakll qqrlnvskil
      841 ivdwdvhhgn gtqqafyndp nvlyislhry ddgnffpgsg apdevgtgag vgfnvnmaft
      901 ggldppmgdt eyltafrtvv mpianefapd vvlvssgfda veghptplgg ynlsakcfgy
      961 ltkqlmglag grvvlalegg hdltaicdas eacvsallgn eldplpekvf qqrananavh
     1021 smekvieihs kywhslqrfa stvgyslvea qkceneeaet vtamaslsvg vkpaekrped
     1081 epmeeeppl
//
LOCUS       XP_041321709            1089 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041321709
VERSION     XP_041321709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1089
                     /product="histone deacetylase 4 isoform X7"
                     /calculated_mol_wt=120242
     Region          <91..152
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(93,97,108..109,112,119,123..124)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          654..1062
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(807..808,816..817,845,847,939,979)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1089
                     /gene="HDAC4"
                     /coded_by="XM_041465775.1:390..3659"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mssqshpdgl sgrdqpvell npprvnhmps svdvstalpl qvapssvpmd lrldhqfsmp
       61 vteptlreqq lqqellalkq kqqiqrqili aefqrqheql srqheaqlhe hikqqqemla
      121 mkhqqelleh qrkleqhrqe qelekqhreq klqqlknkek gkesavaste vkmklqefvl
      181 nkkkalahrn lnhcissdpr fwygktqhss ldqssppqsg vsgtynhpvl gmydskddfp
      241 lrktasepnl klrsrlkqkv aerrsspllr rkdgpvvtal kkrpldvtgt adsacnsapg
      301 sgpsspnnss nnistengia gsvtsiqaet slahrlvnre gsvtqlplyt spslpnitlg
      361 lpatgpssag qaqqdaerla ipalqqrisl fpgthltpyl stttlerdgg tahnpllqhm
      421 vlleqptaqt plvtdwylsg lplhaqplvg gdrvspsihk lrqhrplgrt qsaplpqnaq
      481 alqqlviqqq hqqflekhkq qfqqqqlhin kiiskptepa rqheshpeet eeelrehqal
      541 leepygerat gqkepaglas vvqvkqepie sdeeeaeaqq elepgqrqae qellfrqqal
      601 lleqqrihql rnyqasleaa gmpvsfgghr plsraqsspa satfpmsvqe pptkprfttg
      661 lvydtlmlkh qctcgntnsh pehagriqsi wsrlqetglr gkcecirgrk atleelqtvh
      721 seahtllygt nplnrqklds kkllgsltsm fvrlpcggvg vdsdtiwnev hssgaarlav
      781 gcvielvfkv atgelkngfa vvrppghhae estpmgfcyf nsvaiaakll qqrlnvskil
      841 ivdwdvhhgn gtqqafyndp nvlyislhry ddgnffpgsg apdevgtgag vgfnvnmaft
      901 ggldppmgdt eyltafrtvv mpianefapd vvlvssgfda veghptplgg ynlsakcfgy
      961 ltkqlmglag grvvlalegg hdltaicdas eacvsallgn eldplpekvf qqrananavh
     1021 smekvieihs kywhslqrfa stvgyslvea qkceneeaet vtamaslsvg vkpaekrped
     1081 epmeeeppl
//
LOCUS       XP_041321710            1062 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041321710
VERSION     XP_041321710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465776.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1062
                     /product="histone deacetylase 4 isoform X8"
                     /calculated_mol_wt=117292
     Region          <64..125
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(66,70,81..82,85,92,96..97)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          627..1035
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(780..781,789..790,818,820,912,952)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1062
                     /gene="HDAC4"
                     /coded_by="XM_041465776.1:180..3368"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mpssvdvsta lplqvapssv pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq
       61 iliaefqrqh eqlsrqheaq lhehikqqqe mlamkhqqel lehqrkleqh rqeqelekqh
      121 reqklqqlkn kekgkesava stevkmklqe fvlnkkkala hrnlnhciss dprfwygktq
      181 hssldqsspp qsgvsgtynh pvlgmydskd dfplrktase pnlklrsrlk qkvaerrssp
      241 llrrkdgpvv talkkrpldv tgtadsacns apgsgpsspn nssnnisten giagsvtsiq
      301 aetslahrlv nregsvtqlp lytspslpni tlglpatgps sagqaqqdae rlaipalqqr
      361 islfpgthlt pylstttler dggtahnpll qhmvlleqpt aqtplvtdwy lsglplhaqp
      421 lvggdrvsps ihklrqhrpl grtqsaplpq naqalqqlvi qqqhqqflek hkqqfqqqql
      481 hinkiiskpt eparqheshp eeteeelreh qalleepyge ratgqkepag lasvvqvkqe
      541 piesdeeeae aqqelepgqr qaeqellfrq qallleqqri hqlrnyqasl eaagmpvsfg
      601 ghrplsraqs spasatfpms vqepptkprf ttglvydtlm lkhqctcgnt nshpehagri
      661 qsiwsrlqet glrgkcecir grkatleelq tvhseahtll ygtnplnrqk ldskkllgsl
      721 tsmfvrlpcg gvgvdsdtiw nevhssgaar lavgcvielv fkvatgelkn gfavvrppgh
      781 haeestpmgf cyfnsvaiaa kllqqrlnvs kilivdwdvh hgngtqqafy ndpnvlyisl
      841 hryddgnffp gsgapdevgt gagvgfnvnm aftggldppm gdteyltafr tvvmpianef
      901 apdvvlvssg fdaveghptp lggynlsakc fgyltkqlmg laggrvvlal egghdltaic
      961 daseacvsal lgneldplpe kvfqqranan avhsmekvie ihskywhslq rfastvgysl
     1021 veaqkcenee aetvtamasl svgvkpaekr pedepmeeep pl
//
LOCUS       XP_041321712            1062 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 4 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041321712
VERSION     XP_041321712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1062
                     /product="histone deacetylase 4 isoform X8"
                     /calculated_mol_wt=117292
     Region          <64..125
                     /region_name="ClassIIa_HDAC4_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC4,
                     a Class IIa histone deacetylase; cd10162"
                     /db_xref="CDD:197398"
     Site            order(66,70,81..82,85,92,96..97)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197398"
     Region          627..1035
                     /region_name="HDAC4"
                     /note="Histone deacetylase 4; cd10006"
                     /db_xref="CDD:212530"
     Site            order(780..781,789..790,818,820,912,952)
                     /site_type="active"
                     /db_xref="CDD:212530"
     CDS             1..1062
                     /gene="HDAC4"
                     /coded_by="XM_041465778.1:226..3414"
                     /db_xref="GeneID:121352639"
ORIGIN      
        1 mpssvdvsta lplqvapssv pmdlrldhqf smpvteptlr eqqlqqella lkqkqqiqrq
       61 iliaefqrqh eqlsrqheaq lhehikqqqe mlamkhqqel lehqrkleqh rqeqelekqh
      121 reqklqqlkn kekgkesava stevkmklqe fvlnkkkala hrnlnhciss dprfwygktq
      181 hssldqsspp qsgvsgtynh pvlgmydskd dfplrktase pnlklrsrlk qkvaerrssp
      241 llrrkdgpvv talkkrpldv tgtadsacns apgsgpsspn nssnnisten giagsvtsiq
      301 aetslahrlv nregsvtqlp lytspslpni tlglpatgps sagqaqqdae rlaipalqqr
      361 islfpgthlt pylstttler dggtahnpll qhmvlleqpt aqtplvtdwy lsglplhaqp
      421 lvggdrvsps ihklrqhrpl grtqsaplpq naqalqqlvi qqqhqqflek hkqqfqqqql
      481 hinkiiskpt eparqheshp eeteeelreh qalleepyge ratgqkepag lasvvqvkqe
      541 piesdeeeae aqqelepgqr qaeqellfrq qallleqqri hqlrnyqasl eaagmpvsfg
      601 ghrplsraqs spasatfpms vqepptkprf ttglvydtlm lkhqctcgnt nshpehagri
      661 qsiwsrlqet glrgkcecir grkatleelq tvhseahtll ygtnplnrqk ldskkllgsl
      721 tsmfvrlpcg gvgvdsdtiw nevhssgaar lavgcvielv fkvatgelkn gfavvrppgh
      781 haeestpmgf cyfnsvaiaa kllqqrlnvs kilivdwdvh hgngtqqafy ndpnvlyisl
      841 hryddgnffp gsgapdevgt gagvgfnvnm aftggldppm gdteyltafr tvvmpianef
      901 apdvvlvssg fdaveghptp lggynlsakc fgyltkqlmg laggrvvlal egghdltaic
      961 daseacvsal lgneldplpe kvfqqranan avhsmekvie ihskywhslq rfastvgysl
     1021 veaqkcenee aetvtamasl svgvkpaekr pedepmeeep pl
//
LOCUS       XP_041321713             291 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-glucuronosyltransferase 1A1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321713
VERSION     XP_041321713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465779.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="UDP-glucuronosyltransferase 1A1-like"
                     /calculated_mol_wt=32720
     Region          26..>281
                     /region_name="Glycosyltransferase_GTB-type"
                     /note="glycosyltransferase family 1 and related proteins
                     with GTB topology; cl10013"
                     /db_xref="CDD:471961"
     CDS             1..291
                     /gene="LOC121352642"
                     /coded_by="XM_041465779.1:1..876"
                     /db_xref="GeneID:121352642"
ORIGIN      
        1 mapglsaspa vvllllsllg laaagkllvv pvdgshwlsm revldmlqqk ghevvvvape
       61 vsmhlkqskn fvmkmypvpy tkeemekdfk affhgsfeeg tffgrffhll egmkrlgnfw
      121 vssceqllqn kelirylees kfdailtdpf vpcgvilaeh lslpsvyflr gipcgldfda
      181 tqcpnppsyv pkvftdltdr mtflqrvknl lfdipniflc dfafepyskl aseflqrevt
      241 vqdllrkgsv wllrldfvld yprplmpnii piggvncahk dltqaavpsg f
//
LOCUS       XP_041321714             660 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF3-interacting protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321714
VERSION     XP_041321714.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465780.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..660
                     /product="TRAF3-interacting protein 1 isoform X1"
                     /calculated_mol_wt=75210
     Region          7..117
                     /region_name="MIP-T3"
                     /note="Microtubule-binding protein MIP-T3 CH-like domain;
                     pfam10243"
                     /db_xref="CDD:463020"
     Region          122..>287
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          <308..477
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          500..654
                     /region_name="MIP-T3_C"
                     /note="Microtubule-binding protein MIP-T3 C-terminal
                     region; pfam17749"
                     /db_xref="CDD:465481"
     CDS             1..660
                     /gene="TRAF3IP1"
                     /coded_by="XM_041465780.1:61..2043"
                     /db_xref="GeneID:121352645"
ORIGIN      
        1 mneavsrqtr etlgqvirkp pltdallskp pfrylhdlic evirvtgflr glytdfelks
       61 dnvkdkeski sflqkaidav vmvtgeplsv kparvvaghe pektneflqa igkcclnkls
      121 sdaavkrvla gekadakgkp ppskprqkes reakaeeqks hkdkesrrdt eikdrspsrd
      181 rkpkgdlkes rerekerenq knnedrhkep erdtskegek qereggksrt nkqgretekn
      241 kgkgdperge dlrhdkgqer ekrheggrek drlkgrdkdk ardregekds errrdrdrek
      301 dgehlrehgk ekaekkpsds eesmhrkpqr ptkdskcqpd tenetparis kqpsakasrh
      361 askpggegav dmrsvadgis eddvaelqek nepglaekqk erevesaapd kpengeappd
      421 vpprpaqrri prpgsarlap prvkhqeste llipersgss ktaptvlreq qvsdeedeqf
      481 vvetaaplpe mpkepevelv edqkhgglvk riletkkdye asqkpsqttd rekpvvseas
      541 rkrerdlvak eiekfqgsiq tvcqhvfrlg rmvdyiqedm damrnellmw rqenrehaea
      601 lrreqsitds tleplkaela eleqlmkdqq dkicaakann lrndekiqrm ilsisvssrr
//
LOCUS       XP_041321715             608 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF3-interacting protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321715
VERSION     XP_041321715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="TRAF3-interacting protein 1 isoform X2"
                     /calculated_mol_wt=69398
     Region          7..117
                     /region_name="MIP-T3"
                     /note="Microtubule-binding protein MIP-T3 CH-like domain;
                     pfam10243"
                     /db_xref="CDD:463020"
     Region          122..>287
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          <308..477
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          500..>606
                     /region_name="MIP-T3_C"
                     /note="Microtubule-binding protein MIP-T3 C-terminal
                     region; pfam17749"
                     /db_xref="CDD:465481"
     CDS             1..608
                     /gene="TRAF3IP1"
                     /coded_by="XM_041465781.1:61..1887"
                     /db_xref="GeneID:121352645"
ORIGIN      
        1 mneavsrqtr etlgqvirkp pltdallskp pfrylhdlic evirvtgflr glytdfelks
       61 dnvkdkeski sflqkaidav vmvtgeplsv kparvvaghe pektneflqa igkcclnkls
      121 sdaavkrvla gekadakgkp ppskprqkes reakaeeqks hkdkesrrdt eikdrspsrd
      181 rkpkgdlkes rerekerenq knnedrhkep erdtskegek qereggksrt nkqgretekn
      241 kgkgdperge dlrhdkgqer ekrheggrek drlkgrdkdk ardregekds errrdrdrek
      301 dgehlrehgk ekaekkpsds eesmhrkpqr ptkdskcqpd tenetparis kqpsakasrh
      361 askpggegav dmrsvadgis eddvaelqek nepglaekqk erevesaapd kpengeappd
      421 vpprpaqrri prpgsarlap prvkhqeste llipersgss ktaptvlreq qvsdeedeqf
      481 vvetaaplpe mpkepevelv edqkhgglvk riletkkdye asqkpsqttd rekpvvseas
      541 rkrerdlvak eiekfqgsiq tvcqhvfrlg rmvdyiqedm damrnellmw rqenrehaea
      601 lrreqrtr
//
LOCUS       XP_041321716             960 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 domain-binding protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321716
VERSION     XP_041321716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..960
                     /product="SH3 domain-binding protein 4"
                     /calculated_mol_wt=107400
     Region          59..110
                     /region_name="SH3_SH3BP4"
                     /note="Src Homology 3 domain of SH3 domain-binding protein
                     4; cd11757"
                     /db_xref="CDD:212691"
     Site            order(64,66,69,73,91..92,105,107..108)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212691"
     Region          320..>392
                     /region_name="ZU5"
                     /note="ZU5 domain; cl02517"
                     /db_xref="CDD:470600"
     Region          655..719
                     /region_name="SH3_2"
                     /note="Variant SH3 domain; pfam07653"
                     /db_xref="CDD:429575"
     CDS             1..960
                     /gene="SH3BP4"
                     /coded_by="XM_041465782.1:106..2988"
                     /db_xref="GeneID:121352646"
ORIGIN      
        1 maaqriraan sgglprckse gtlidlgegf aettlcdvkv pspsallvdn ptsfgnakev
       61 vaikdycptn fttlkfskgd hlyvldtsgg ewwyahntte mgyipssyvq pvnhrnsslt
      121 dsgvidnlle spdegvkeld llgewtdvkr nsaksyhnnp flngvqtnpf lngnlqaapg
      181 sdkesdssva mdlllfdtaa pmatlpnssl gnlfdefpst nrldveqpvr rdnpffrskr
      241 syslselsvl qaksdapass gffsglkspt peqfqsredf rtawlnhrkl arschdldll
      301 gqnpgwgqtq pvetnivckl dssggavqlp dtnisihvpe ghvcpgetqq ismkamldpp
      361 lelnsdkcst ispvlqikls nmevktfiil emkvsaevkn dvmskslvgl qclrsdmkeg
      421 pytpmqlsys ygdtiqvqle nlepcmyiaa vaqgqnilyp ytvwdyiskk itvgvygpkh
      481 ihpsfktvva mfghecapkt llvnevtrqs hspapvalql wgkhqfalsr pqdlklcmfs
      541 nmtnyevkas eqakivrgfq mklgkvsrli fpiashdpne lsdftlriqv kddqdailtq
      601 fcvqtpqppp knaikptgqr rflkknevgk iilsplaata kypvfqdrpv lslkygkllk
      661 tvvrqsknhy lleykkgdvi allseekirl kgqlwtkewy igyyqgkvgl vhtknvlvvg
      721 kvkpsyfsgp dlttsllleq ilrpckflty iyasvrtllm enlsswrsfa dalgylnlpl
      781 tffcraemds epervasvle klkedcnsve nkerksfqke lmtallkmdc qglvvrliqd
      841 fvllttavev aqrwrelaek lakvskqqmd ayeaphrdks gtvdaeamwk paydflltws
      901 sqmgdsyrdv iqelhtgldk mknpitkrwk hltgtlilvn sldmlraaaf spqdhedfai
//
LOCUS       XP_041321718             160 aa            linear   VRT 06-MAY-2021
DEFINITION  twist-related protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321718
VERSION     XP_041321718.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465784.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..160
                     /product="twist-related protein 2"
                     /calculated_mol_wt=18071
     Region          51..132
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(75..76,78,83,102..103)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(81..82,85..86,88..89,93,103..104,107..108,111,
                     113..114,117..118)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..160
                     /gene="TWIST2"
                     /coded_by="XM_041465784.1:157..639"
                     /db_xref="GeneID:121352647"
ORIGIN      
        1 meesssspvs pvdslgtsee elerqpkrfg rkrryskkss edgspnpgkr gkksspssqs
       61 yeelqsqril anvrerqrtq slneafaalr kiiptlpsdk lskiqtlkla aryidflyqv
      121 lqsdemdskm tscsyvaher lsyafsvwrm egawsmsash
//
LOCUS       XP_041321719            1244 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 40 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321719
VERSION     XP_041321719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1244
                     /product="ubiquitin carboxyl-terminal hydrolase 40 isoform
                     X1"
                     /calculated_mol_wt=140811
     Region          39..387
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(45,50,305,336)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1244
                     /gene="USP40"
                     /coded_by="XM_041465785.1:236..3970"
                     /db_xref="GeneID:121352648"
ORIGIN      
        1 mfgdlfeedf sfisnnhygk gkkskprese ppaprdftnl sgiknqggtc ylnsllqtll
       61 ftpefrealf slgpeelgtl ddsrkpdakv riiplqlqrl faqlllldqq aastadltes
      121 fgwssheemr qhdvqelnri lfsaletslv gtsghdlinr lyhgivvnqi vckecknvse
      181 rqedfldltv avkgvaglee alwnmyveee yfendnlyrc gacdklveas ksaklrklpp
      241 fltisllrfn fdfekceryk etscytfpiq inlkpfceqt emddseymye lfsviihkgg
      301 cygghyhvyi rdvdelgnwq lqeeedglie ekalrdtena ketenplavl kgilleeeak
      361 qipmdqlgqk llekkgvswn kkyrkqygpl rkylqnhpqi fqlspdgnkv slkethkllf
      421 kldshgqnlq spsqkndvqw ncekkpprpr aasagchwfd lndskvqpik ekdiekqfqg
      481 kesaymlfyr kaqlkrppea hgnpryqipe hllnemnaan telqkkraec dsanngidlh
      541 lhlsscykfh ngalhpslsw kesvvdltid rrktlgdlrq avfqmleswe gdmvlsmakp
      601 lpaglhlyqv ldgdeltldg igladgadif vwngkevggt kvlagpehep vvlnvlrlae
      661 hneggkgqhf seaqhvfscs tslgqlhsal apaggiilkn gsgaeteakn wevfheedmk
      721 etvrsvglrd gcsvlildsh dqsfvnvasg nltaftydis wlqvknfcgg eeeekhvkit
      781 atietvmsdi kmkairelql eeelankscl rpvsgngkll spvpedytvk eaelkmgsll
      841 glcrgkapts tqlflyfmvg sdqscspeme ivveetasvs eclnlmleks glsgdnwhlr
      901 rldwcyeage alsqenatlk elnvcrgdtl vitegklpek gflkipiwwl kpsshkkhge
      961 naqdqvngit wkmealqvsa aaaapepthp gldlcyagri eiageasled lkmqaltlpc
     1021 cqeqvvplps flrawtmdnk rpgkllrdnk rrlsdyrlga rveicieplq eeenlgpqel
     1081 llrvqmgipg erdyssswdl vwdiskectt walrqrvash yclpvdkiei akyfperfew
     1141 lpisswtqqi skrkrrkkqa slqsapyhlk dgdiigvknl llddtkdfst vrddigkekq
     1201 rqlalekrks rqeraqdplf peerlptkpr kpevalsisv gvfr
//
LOCUS       XP_041321720            1244 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 40 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321720
VERSION     XP_041321720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465786.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1244
                     /product="ubiquitin carboxyl-terminal hydrolase 40 isoform
                     X1"
                     /calculated_mol_wt=140811
     Region          39..387
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(45,50,305,336)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1244
                     /gene="USP40"
                     /coded_by="XM_041465786.1:202..3936"
                     /db_xref="GeneID:121352648"
ORIGIN      
        1 mfgdlfeedf sfisnnhygk gkkskprese ppaprdftnl sgiknqggtc ylnsllqtll
       61 ftpefrealf slgpeelgtl ddsrkpdakv riiplqlqrl faqlllldqq aastadltes
      121 fgwssheemr qhdvqelnri lfsaletslv gtsghdlinr lyhgivvnqi vckecknvse
      181 rqedfldltv avkgvaglee alwnmyveee yfendnlyrc gacdklveas ksaklrklpp
      241 fltisllrfn fdfekceryk etscytfpiq inlkpfceqt emddseymye lfsviihkgg
      301 cygghyhvyi rdvdelgnwq lqeeedglie ekalrdtena ketenplavl kgilleeeak
      361 qipmdqlgqk llekkgvswn kkyrkqygpl rkylqnhpqi fqlspdgnkv slkethkllf
      421 kldshgqnlq spsqkndvqw ncekkpprpr aasagchwfd lndskvqpik ekdiekqfqg
      481 kesaymlfyr kaqlkrppea hgnpryqipe hllnemnaan telqkkraec dsanngidlh
      541 lhlsscykfh ngalhpslsw kesvvdltid rrktlgdlrq avfqmleswe gdmvlsmakp
      601 lpaglhlyqv ldgdeltldg igladgadif vwngkevggt kvlagpehep vvlnvlrlae
      661 hneggkgqhf seaqhvfscs tslgqlhsal apaggiilkn gsgaeteakn wevfheedmk
      721 etvrsvglrd gcsvlildsh dqsfvnvasg nltaftydis wlqvknfcgg eeeekhvkit
      781 atietvmsdi kmkairelql eeelankscl rpvsgngkll spvpedytvk eaelkmgsll
      841 glcrgkapts tqlflyfmvg sdqscspeme ivveetasvs eclnlmleks glsgdnwhlr
      901 rldwcyeage alsqenatlk elnvcrgdtl vitegklpek gflkipiwwl kpsshkkhge
      961 naqdqvngit wkmealqvsa aaaapepthp gldlcyagri eiageasled lkmqaltlpc
     1021 cqeqvvplps flrawtmdnk rpgkllrdnk rrlsdyrlga rveicieplq eeenlgpqel
     1081 llrvqmgipg erdyssswdl vwdiskectt walrqrvash yclpvdkiei akyfperfew
     1141 lpisswtqqi skrkrrkkqa slqsapyhlk dgdiigvknl llddtkdfst vrddigkekq
     1201 rqlalekrks rqeraqdplf peerlptkpr kpevalsisv gvfr
//
LOCUS       XP_041321721            1244 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 40 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321721
VERSION     XP_041321721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1244
                     /product="ubiquitin carboxyl-terminal hydrolase 40 isoform
                     X1"
                     /calculated_mol_wt=140811
     Region          39..387
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(45,50,305,336)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1244
                     /gene="USP40"
                     /coded_by="XM_041465787.1:232..3966"
                     /db_xref="GeneID:121352648"
ORIGIN      
        1 mfgdlfeedf sfisnnhygk gkkskprese ppaprdftnl sgiknqggtc ylnsllqtll
       61 ftpefrealf slgpeelgtl ddsrkpdakv riiplqlqrl faqlllldqq aastadltes
      121 fgwssheemr qhdvqelnri lfsaletslv gtsghdlinr lyhgivvnqi vckecknvse
      181 rqedfldltv avkgvaglee alwnmyveee yfendnlyrc gacdklveas ksaklrklpp
      241 fltisllrfn fdfekceryk etscytfpiq inlkpfceqt emddseymye lfsviihkgg
      301 cygghyhvyi rdvdelgnwq lqeeedglie ekalrdtena ketenplavl kgilleeeak
      361 qipmdqlgqk llekkgvswn kkyrkqygpl rkylqnhpqi fqlspdgnkv slkethkllf
      421 kldshgqnlq spsqkndvqw ncekkpprpr aasagchwfd lndskvqpik ekdiekqfqg
      481 kesaymlfyr kaqlkrppea hgnpryqipe hllnemnaan telqkkraec dsanngidlh
      541 lhlsscykfh ngalhpslsw kesvvdltid rrktlgdlrq avfqmleswe gdmvlsmakp
      601 lpaglhlyqv ldgdeltldg igladgadif vwngkevggt kvlagpehep vvlnvlrlae
      661 hneggkgqhf seaqhvfscs tslgqlhsal apaggiilkn gsgaeteakn wevfheedmk
      721 etvrsvglrd gcsvlildsh dqsfvnvasg nltaftydis wlqvknfcgg eeeekhvkit
      781 atietvmsdi kmkairelql eeelankscl rpvsgngkll spvpedytvk eaelkmgsll
      841 glcrgkapts tqlflyfmvg sdqscspeme ivveetasvs eclnlmleks glsgdnwhlr
      901 rldwcyeage alsqenatlk elnvcrgdtl vitegklpek gflkipiwwl kpsshkkhge
      961 naqdqvngit wkmealqvsa aaaapepthp gldlcyagri eiageasled lkmqaltlpc
     1021 cqeqvvplps flrawtmdnk rpgkllrdnk rrlsdyrlga rveicieplq eeenlgpqel
     1081 llrvqmgipg erdyssswdl vwdiskectt walrqrvash yclpvdkiei akyfperfew
     1141 lpisswtqqi skrkrrkkqa slqsapyhlk dgdiigvknl llddtkdfst vrddigkekq
     1201 rqlalekrks rqeraqdplf peerlptkpr kpevalsisv gvfr
//
LOCUS       XP_041321722            1244 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 40 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321722
VERSION     XP_041321722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1244
                     /product="ubiquitin carboxyl-terminal hydrolase 40 isoform
                     X1"
                     /calculated_mol_wt=140811
     Region          39..387
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(45,50,305,336)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1244
                     /gene="USP40"
                     /coded_by="XM_041465788.1:87..3821"
                     /db_xref="GeneID:121352648"
ORIGIN      
        1 mfgdlfeedf sfisnnhygk gkkskprese ppaprdftnl sgiknqggtc ylnsllqtll
       61 ftpefrealf slgpeelgtl ddsrkpdakv riiplqlqrl faqlllldqq aastadltes
      121 fgwssheemr qhdvqelnri lfsaletslv gtsghdlinr lyhgivvnqi vckecknvse
      181 rqedfldltv avkgvaglee alwnmyveee yfendnlyrc gacdklveas ksaklrklpp
      241 fltisllrfn fdfekceryk etscytfpiq inlkpfceqt emddseymye lfsviihkgg
      301 cygghyhvyi rdvdelgnwq lqeeedglie ekalrdtena ketenplavl kgilleeeak
      361 qipmdqlgqk llekkgvswn kkyrkqygpl rkylqnhpqi fqlspdgnkv slkethkllf
      421 kldshgqnlq spsqkndvqw ncekkpprpr aasagchwfd lndskvqpik ekdiekqfqg
      481 kesaymlfyr kaqlkrppea hgnpryqipe hllnemnaan telqkkraec dsanngidlh
      541 lhlsscykfh ngalhpslsw kesvvdltid rrktlgdlrq avfqmleswe gdmvlsmakp
      601 lpaglhlyqv ldgdeltldg igladgadif vwngkevggt kvlagpehep vvlnvlrlae
      661 hneggkgqhf seaqhvfscs tslgqlhsal apaggiilkn gsgaeteakn wevfheedmk
      721 etvrsvglrd gcsvlildsh dqsfvnvasg nltaftydis wlqvknfcgg eeeekhvkit
      781 atietvmsdi kmkairelql eeelankscl rpvsgngkll spvpedytvk eaelkmgsll
      841 glcrgkapts tqlflyfmvg sdqscspeme ivveetasvs eclnlmleks glsgdnwhlr
      901 rldwcyeage alsqenatlk elnvcrgdtl vitegklpek gflkipiwwl kpsshkkhge
      961 naqdqvngit wkmealqvsa aaaapepthp gldlcyagri eiageasled lkmqaltlpc
     1021 cqeqvvplps flrawtmdnk rpgkllrdnk rrlsdyrlga rveicieplq eeenlgpqel
     1081 llrvqmgipg erdyssswdl vwdiskectt walrqrvash yclpvdkiei akyfperfew
     1141 lpisswtqqi skrkrrkkqa slqsapyhlk dgdiigvknl llddtkdfst vrddigkekq
     1201 rqlalekrks rqeraqdplf peerlptkpr kpevalsisv gvfr
//
LOCUS       XP_041321723            1206 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 40 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321723
VERSION     XP_041321723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1206
                     /product="ubiquitin carboxyl-terminal hydrolase 40 isoform
                     X2"
                     /calculated_mol_wt=136532
     Region          39..349
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     Site            order(45,50,267,298)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..1206
                     /gene="USP40"
                     /coded_by="XM_041465789.1:236..3856"
                     /db_xref="GeneID:121352648"
ORIGIN      
        1 mfgdlfeedf sfisnnhygk gkkskprese ppaprdftnl sgiknqggtc ylnsllqtll
       61 ftpefrealf slgpeelgtl ddsrkpdake mrqhdvqeln rilfsalets lvgtsghdli
      121 nrlyhgivvn qivckecknv serqedfldl tvavkgvagl eealwnmyve eeyfendnly
      181 rcgacdklve asksaklrkl ppfltisllr fnfdfekcer yketscytfp iqinlkpfce
      241 qtemddseym yelfsviihk ggcygghyhv yirdvdelgn wqlqeeedgl ieekalrdte
      301 naketenpla vlkgilleee akqipmdqlg qkllekkgvs wnkkyrkqyg plrkylqnhp
      361 qifqlspdgn kvslkethkl lfkldshgqn lqspsqkndv qwncekkppr praasagchw
      421 fdlndskvqp ikekdiekqf qgkesaymlf yrkaqlkrpp eahgnpryqi pehllnemna
      481 antelqkkra ecdsanngid lhlhlsscyk fhngalhpsl swkesvvdlt idrrktlgdl
      541 rqavfqmles wegdmvlsma kplpaglhly qvldgdeltl dgigladgad ifvwngkevg
      601 gtkvlagpeh epvvlnvlrl aehneggkgq hfseaqhvfs cstslgqlhs alapaggiil
      661 kngsgaetea knwevfheed mketvrsvgl rdgcsvlild shdqsfvnva sgnltaftyd
      721 iswlqvknfc ggeeeekhvk itatietvms dikmkairel qleeelanks clrpvsgngk
      781 llspvpedyt vkeaelkmgs llglcrgkap tstqlflyfm vgsdqscspe meivveetas
      841 vseclnlmle ksglsgdnwh lrrldwcyea gealsqenat lkelnvcrgd tlvitegklp
      901 ekgflkipiw wlkpsshkkh genaqdqvng itwkmealqv saaaaapept hpgldlcyag
      961 rieiageasl edlkmqaltl pccqeqvvpl psflrawtmd nkrpgkllrd nkrrlsdyrl
     1021 garveiciep lqeeenlgpq elllrvqmgi pgerdysssw dlvwdiskec ttwalrqrva
     1081 shyclpvdki eiakyfperf ewlpisswtq qiskrkrrkk qaslqsapyh lkdgdiigvk
     1141 nlllddtkdf stvrddigke kqrqlalekr ksrqeraqdp lfpeerlptk prkpevalsi
     1201 svgvfr
//
LOCUS       XP_041321724            1027 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 40 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321724
VERSION     XP_041321724.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465790.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1027
                     /product="ubiquitin carboxyl-terminal hydrolase 40 isoform
                     X3"
                     /calculated_mol_wt=115479
     Region          39..387
                     /region_name="peptidase_C19C"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02659"
                     /db_xref="CDD:239124"
     Site            order(45,50,305,336)
                     /site_type="active"
                     /db_xref="CDD:239124"
     CDS             1..1027
                     /gene="USP40"
                     /coded_by="XM_041465790.1:236..3319"
                     /db_xref="GeneID:121352648"
ORIGIN      
        1 mfgdlfeedf sfisnnhygk gkkskprese ppaprdftnl sgiknqggtc ylnsllqtll
       61 ftpefrealf slgpeelgtl ddsrkpdakv riiplqlqrl faqlllldqq aastadltes
      121 fgwssheemr qhdvqelnri lfsaletslv gtsghdlinr lyhgivvnqi vckecknvse
      181 rqedfldltv avkgvaglee alwnmyveee yfendnlyrc gacdklveas ksaklrklpp
      241 fltisllrfn fdfekceryk etscytfpiq inlkpfceqt emddseymye lfsviihkgg
      301 cygghyhvyi rdvdelgnwq lqeeedglie ekalrdtena ketenplavl kgilleeeak
      361 qipmdqlgqk llekkgvswn kkyrkqygpl rkylqnhpqi fqlspdgnkv slkethkllf
      421 kldshgqnlq spsqkndvqw ncekkpprpr aasagchwfd lndskvqpik ekdiekqfqg
      481 kesaymlfyr kaqlkrppea hgnpryqipe hllnemnaan telqkkraec dsanngidlh
      541 lhlsscykfh ngalhpslsw kesvvdltid rrktlgdlrq avfqmleswe gdmvlsmakp
      601 lpaglhlyqv ldgdeltldg igladgadif vwngkevggt kvlagpehep vvlnvlrlae
      661 hneggkgqhf seaqhvfscs tslgqlhsal apaggiilkn gsgaeteakn wevfheedmk
      721 etvrsvglrd gcsvlildsh dqsfvnvasg nltaftydis wlqvknfcgg eeeekhvkit
      781 atietvmsdi kmkairelql eeelankscl rpvsgngkll spvpedytvk eaelkmgsll
      841 glcrgkapts tqlflyfmvg sdqscspeme ivveetasvs eclnlmleks glsgdnwhlr
      901 rldwcyeage alsqenatlk elnvcrgdtl vitegklpek gflkipiwwl kpsshkkhge
      961 naqdqvngit wkmealqvsa aaaapepthp gldlcyagri eiageasled lkmqsvvpwc
     1021 lchghwl
//
LOCUS       XP_041321725             187 aa            linear   VRT 06-MAY-2021
DEFINITION  secreted phosphoprotein 24 [Pyrgilauda ruficollis].
ACCESSION   XP_041321725
VERSION     XP_041321725.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465791.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..187
                     /product="secreted phosphoprotein 24"
                     /calculated_mol_wt=20675
     Region          63..123
                     /region_name="Cathelicidins"
                     /note="cl29764"
                     /db_xref="CDD:453055"
     CDS             1..187
                     /gene="SPP2"
                     /coded_by="XM_041465791.1:25..588"
                     /db_xref="GeneID:121352649"
ORIGIN      
        1 mriliflltl gvfscsgfpa ydydlpvtee alnasiarin sqswsrnlyg vvrsrvmgvd
       61 twdsdtygld lhfsiretvc tkasgrdpst cdfktgpfvp tascrsivev sgglianltv
      121 rchrstfsse svsseemmhv pittpdrwgg arreddafap eafpsrgrgs srgdwnkpry
      181 fnpdkme
//
LOCUS       XP_041321726             187 aa            linear   VRT 06-MAY-2021
DEFINITION  secreted phosphoprotein 24 [Pyrgilauda ruficollis].
ACCESSION   XP_041321726
VERSION     XP_041321726.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465792.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..187
                     /product="secreted phosphoprotein 24"
                     /calculated_mol_wt=20675
     Region          63..123
                     /region_name="Cathelicidins"
                     /note="cl29764"
                     /db_xref="CDD:453055"
     CDS             1..187
                     /gene="SPP2"
                     /coded_by="XM_041465792.1:25..588"
                     /db_xref="GeneID:121352649"
ORIGIN      
        1 mriliflltl gvfscsgfpa ydydlpvtee alnasiarin sqswsrnlyg vvrsrvmgvd
       61 twdsdtygld lhfsiretvc tkasgrdpst cdfktgpfvp tascrsivev sgglianltv
      121 rchrstfsse svsseemmhv pittpdrwgg arreddafap eafpsrgrgs srgdwnkpry
      181 fnpdkme
//
LOCUS       XP_041321728             364 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10,
            mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041321728
VERSION     XP_041321728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..364
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex subunit 10, mitochondrial"
                     /calculated_mol_wt=40978
     Region          68..286
                     /region_name="NDUO42"
                     /note="NADH:Ubiquinone oxioreductase, 42 kDa (NDUO42) is a
                     family of proteins that are highly similar to
                     deoxyribonucleoside kinases (dNK). Members of this family
                     have been identified as one of the subunits of
                     NADH:Ubiquinone oxioreductase (complex I), a...; cd02030"
                     /db_xref="CDD:238988"
     CDS             1..364
                     /gene="NDUFA10"
                     /coded_by="XM_041465794.1:53..1147"
                     /db_xref="GeneID:121352650"
ORIGIN      
        1 mslwvsrlgr aaaargrrgs sgpgsaalgs vllgarihts peqslqygwl aymlgertsk
       61 kftehskvft vegnlssgkg klaqqladkl gmkyfpeadi hyqdrlsgdg kllpekfngf
      121 cslekfytdp kspdghsyrl qswlfgsrvl qyadalehll stgqgvvler spysdfvfld
      181 amlkqgyvhk rcldhykevk eisiseflpp hlviyvdvpv pevqkriqdt gkpyekkvsp
      241 sylqsieday kttflpaise ssevlqytat aaedvekvie dieylkfdkg pwveqddvsf
      301 hhlrlhvqdk agvldsvsip rfipeitigg seydkiyyey ralpgrkyka gynadagdkw
      361 iwlk
//
LOCUS       XP_041321729             358 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321729
VERSION     XP_041321729.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465795.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="ankyrin repeat and SOCS box protein 1 isoform
                     X1"
                     /calculated_mol_wt=38993
     Region          46..91
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          49..129
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Site            order(100,104..105,108..110,112..113,117,120,129,131,133,
                     137..138,141..143,145..146,150,153,162,164,166,170..171,
                     174..176,178..179,183,186)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          100..129
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <101..317
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          131..162
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          164..193
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          200..240
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          315..356
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(316..321,327,337,343)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..358
                     /gene="ASB1"
                     /coded_by="XM_041465795.1:24..1100"
                     /db_xref="GeneID:121352653"
ORIGIN      
        1 maeggdppap gsplsprrvp lssagrnlke wlreqfcdhp lehcedtrlh daafvgdlpt
       61 lrsllqdesf qrewgcsnrv sprhsrinek svwccgwlpc tplriaatag hgpcvdfllr
      121 kgaeidlvdv kgqtalyvav vnghlecaki llkagadpng srhhrstpvy haarvgradi
      181 lqelirygad vdvnqqlasr gpgqaprplt tlvvcplyis aayhnlpcfr lllqaganpd
      241 fnccgpinvr gfsrgspvcv ldavlrhgce pafvrllvdf gadlnlvkve algveaagrv
      301 kvnaealevf keargrarsl lslcriavrr ilgksrldli pslpipdpik qfllhehs
//
LOCUS       XP_041321730             347 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321730
VERSION     XP_041321730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="ankyrin repeat and SOCS box protein 1 isoform
                     X2"
                     /calculated_mol_wt=37803
     Region          35..80
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..118
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Site            order(89,93..94,97..99,101..102,106,109,118,120,122,
                     126..127,130..132,134..135,139,142,151,153,155,159..160,
                     163..165,167..168,172,175)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          89..118
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <90..306
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          120..151
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          153..182
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          189..229
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          304..345
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(305..310,316,326,332)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..347
                     /gene="ASB1"
                     /coded_by="XM_041465796.1:24..1067"
                     /db_xref="GeneID:121352653"
ORIGIN      
        1 maeggdppap gsagrnlkew lreqfcdhpl ehcedtrlhd aafvgdlptl rsllqdesfq
       61 rewgcsnrvs prhsrineks vwccgwlpct plriaatagh gpcvdfllrk gaeidlvdvk
      121 gqtalyvavv nghlecakil lkagadpngs rhhrstpvyh aarvgradil qelirygadv
      181 dvnqqlasrg pgqaprpltt lvvcplyisa ayhnlpcfrl llqaganpdf nccgpinvrg
      241 fsrgspvcvl davlrhgcep afvrllvdfg adlnlvkvea lgveaagrvk vnaealevfk
      301 eargrarsll slcriavrri lgksrldlip slpipdpikq fllhehs
//
LOCUS       XP_041321731             345 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321731
VERSION     XP_041321731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465797.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..345
                     /product="ankyrin repeat and SOCS box protein 1 isoform
                     X3"
                     /calculated_mol_wt=37427
     Region          <46..227
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..78
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(87,91..92,95..97,99..100,104,107,116,118,120,
                     124..125,128..130,132..133,137,140,149,151,153,157..158,
                     161..163,165..166,170,173)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          87..116
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          118..149
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          151..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          187..227
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          302..343
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(303..308,314,324,330)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..345
                     /gene="ASB1"
                     /coded_by="XM_041465797.1:24..1061"
                     /db_xref="GeneID:121352653"
ORIGIN      
        1 maeggdppap gsplsprrvp lssagrnlke wlreqfcdhp lehcedtrlh daafvgdlpt
       61 lrsllqdesf qsrineksvw ccgwlpctpl riaataghgp cvdfllrkga eidlvdvkgq
      121 talyvavvng hlecakillk agadpngsrh hrstpvyhaa rvgradilqe lirygadvdv
      181 nqqlasrgpg qaprplttlv vcplyisaay hnlpcfrlll qaganpdfnc cgpinvrgfs
      241 rgspvcvlda vlrhgcepaf vrllvdfgad lnlvkvealg veaagrvkvn aealevfkea
      301 rgrarsllsl criavrrilg ksrldlipsl pipdpikqfl lhehs
//
LOCUS       XP_041321732             334 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321732
VERSION     XP_041321732.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465798.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="ankyrin repeat and SOCS box protein 1 isoform
                     X4"
                     /calculated_mol_wt=36237
     Region          <35..216
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          35..67
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(76,80..81,84..86,88..89,93,96,105,107,109,113..114,
                     117..119,121..122,126,129,138,140,142,146..147,150..152,
                     154..155,159,162)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          76..105
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          107..138
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          140..169
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          176..216
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          291..332
                     /region_name="SOCS"
                     /note="SOCS (suppressors of cytokine signaling) box. The
                     SOCS box is found in the C-terminal region of CIS/SOCS
                     family proteins (in combination with a SH2 domain), ASBs
                     (ankyrin repeat-containing proteins with a SOCS box), SSBs
                     (SPRY domain-containing proteins...; cl02533"
                     /db_xref="CDD:470605"
     Site            order(292..297,303,313,319)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     CDS             1..334
                     /gene="ASB1"
                     /coded_by="XM_041465798.1:24..1028"
                     /db_xref="GeneID:121352653"
ORIGIN      
        1 maeggdppap gsagrnlkew lreqfcdhpl ehcedtrlhd aafvgdlptl rsllqdesfq
       61 srineksvwc cgwlpctplr iaataghgpc vdfllrkgae idlvdvkgqt alyvavvngh
      121 lecakillka gadpngsrhh rstpvyhaar vgradilqel irygadvdvn qqlasrgpgq
      181 aprplttlvv cplyisaayh nlpcfrlllq aganpdfncc gpinvrgfsr gspvcvldav
      241 lrhgcepafv rllvdfgadl nlvkvealgv eaagrvkvna ealevfkear grarsllslc
      301 riavrrilgk srldlipslp ipdpikqfll hehs
//
LOCUS       XP_041321733             951 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321733
VERSION     XP_041321733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..951
                     /product="aryl hydrocarbon receptor-like"
                     /calculated_mol_wt=103309
     Region          20..80
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(28..29,31,36,57..58)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(34..35,38..39,41..42,46,58..59,62..63,66,68..69,
                     72..73)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     Region          108..171
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Site            order(130,134,140,153..156,173,178)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Site            order(150,154,162,165..166,189,191)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     Region          289..374
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(317,325,328..329,357,359)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     CDS             1..951
                     /gene="LOC121352655"
                     /coded_by="XM_041465799.1:1..2856"
                     /db_xref="GeneID:121352655"
ORIGIN      
        1 myagrrrrkp vpratrpgpa egggsnpskr hrerlnrele rlagllpfpp dvvagldkls
       61 vlrlsagflr arsffgvalk npgakeaqrd racgtgpalg satvpegell lqalngfvlv
      121 vtseglifys shtiqdylgf hqtdvmhqsv felihtedqp efrrnlhwal dplhtaegep
      181 fpaagkslss saviykpdql ppedssfler sfvcrfrcll dnssgflaln lqgrlkflhg
      241 qskrsedgsv lppqlalfai stplqppsil qirtknmifr tkhkldftpl acdakgkvvl
      301 gyteaelrmc gtgyqfvhaa dmlycaenhv rmmktgesgl tvfrlltkdn rwkwvqanar
      361 liyknskpey ivvtqrplvd eeggehlrkr smhlpftfat geallyqsth plpgfpdlfq
      421 skeklskskr psscshvgrf qkngvdprsl lgavmqqdka vytshsapip npsfsstfql
      481 egvslpgagg dvwsmdtapa ssrgsslqek lldlqqddpl ldtmdllsik sdqscsnelf
      541 saleglglna edvellllge kmvmvstdpd qspslnnsva snqilcvpsp padgheggqq
      601 vcplpdtaps pqggtapcha qskdsrchla qqaeqrsaal aqppillweq prsavpglls
      661 glaeqeelss gsqwrpageg tvlhsfqpvq gtpwhrapss apgdpcpqeq prarqlqgdf
      721 savqplqedi hqpfsqpsqc qdhvappsqp khhhllvdrv cghspssspq pspwqdyvcp
      781 llqspaqpgv cglssdvisq tqgclgprpg vppqhfnlng lcsvdaagtg dsweeapypr
      841 ffppfyqlip ekqlspvlsm pqrsspssaa ghfgsisspl etlnsygthg taqhqegrhr
      901 pcsgcglpss pmglpqdhpv lgrslalpcq pqsraevlpd pphasrgdfy l
//
LOCUS       XP_041321734             528 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-glucuronosyltransferase 1A8-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321734
VERSION     XP_041321734.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465800.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..528
                     /product="UDP-glucuronosyltransferase 1A8-like isoform X1"
                     /calculated_mol_wt=59228
     Region          23..500
                     /region_name="UDPGT"
                     /note="UDP-glucoronosyl and UDP-glucosyl transferase;
                     pfam00201"
                     /db_xref="CDD:278624"
     Site            order(33..34,36,197,200..201,205,246,304,367,369,371..372,
                     375)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(33,304,367,369,371..372)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            34
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..528
                     /gene="LOC121352656"
                     /coded_by="XM_041465800.1:1..1587"
                     /db_xref="GeneID:121352656"
ORIGIN      
        1 mavrlccawi sillllpsls dggkllvvpm vgshwlsmqe aveklsergh evvvlvpevs
       61 wqmettqayk vvthpvsqtl eeldnafqey vtvhltqkpf plnalamyna svhvfstffg
      121 qckdlfrsqe ilkflnesrf davltdplfm cgpilahhls lpfvffmrgf gcnlhfaapq
      181 cpsplsyipr vfsfnsdhmt ffqrvenali slleldycng fyaealqlss evlqrdvslm
      241 dlvnsaaiwi lrfdfvfeyv rpvmpnmvfv ggincakkkp lpkefeamvn asgehgivvf
      301 slgsmvseip mkkameiaeg lgtvpqtvfw rytgkappnl pknvklvkwl pqndllahpk
      361 trafithggs hgvyegicna vpmvlmplfg dqmdnakrve srgagltlni lemtsndisn
      421 alkavindkt ykeniqrlsd lhldrpihpl dlavhwvefv mrhkgaphlr paahdlnwvq
      481 yhsldviafl aavtlltlfi sfkcclcccr rcfckkgrig katkaksh
//
LOCUS       XP_041321735             524 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-glucuronosyltransferase 1-6-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321735
VERSION     XP_041321735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..524
                     /product="UDP-glucuronosyltransferase 1-6-like isoform X2"
                     /calculated_mol_wt=59057
     Region          23..496
                     /region_name="UDPGT"
                     /note="UDP-glucoronosyl and UDP-glucosyl transferase;
                     pfam00201"
                     /db_xref="CDD:278624"
     Site            order(33..34,36,193,196..197,201,232,300,363,365,367..368,
                     371)
                     /site_type="active"
                     /db_xref="CDD:340817"
     Site            order(33,300,363,365,367..368)
                     /site_type="active"
                     /note="TDP-binding site [active]"
                     /db_xref="CDD:340817"
     Site            34
                     /site_type="active"
                     /note="acceptor substrate-binding pocket [active]"
                     /db_xref="CDD:340817"
     CDS             1..524
                     /gene="LOC121352656"
                     /coded_by="XM_041465801.1:1..1575"
                     /db_xref="GeneID:121352656"
ORIGIN      
        1 mwrhqvhagl vlflafwsla dggkllvvpq dgshwlsmri vleklwekgh eivvvipdaa
       61 lllkssqsft iktysvpytq efvdqyyqkl gedsfetlnl sfllsnitel tnmftsacrh
      121 llsdkvlmky lqdskfdaim mdpvlpcgpi laeylslpsv yfmrglpctl dykaaqspsp
      181 vsyvpktlss lsnrmtfper vknfliglse pllchlfylk yeslaseflq rdvtiqelfs
      241 qasvllmryd fvfeyprpvm pnmvyvggin clqkkplske feamvnasge hgivvfslgs
      301 mvseipmkka meiaeglgtv pqtvfwrytg kappnlpknv klvkwlpqnd llahpktraf
      361 ithggshgvy egicnavpmv lmplfgdqmd nakrvesrga gltlnilemt sndisnalka
      421 vindktyken iqrlsdlhld rpihpldlav hwvefvmrhk gaphlrpaah dlnwvqyhsl
      481 dviaflaavt lltlfisfkc clcccrrcfc kkgrigkatk aksh
//
LOCUS       XP_041321736             192 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 4C [Pyrgilauda ruficollis].
ACCESSION   XP_041321736
VERSION     XP_041321736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="ADP-ribosylation factor-like protein 4C"
                     /calculated_mol_wt=21402
     Region          11..192
                     /region_name="Arl4_Arl7"
                     /note="Arf-like 4 (Arl4) and 7 (Arl7) GTPases; cd04152"
                     /db_xref="CDD:206719"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206719"
     Site            order(22..28,43..44,71,127..128,130,161..163)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206719"
     Site            order(22..23,27,31,43..50,77,82)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206719"
     Site            32..47
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206719"
     Site            order(44..48,53,68,72,78,80..82)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206719"
     Site            44
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206719"
     Site            order(45..52,67,78,81..82)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206719"
     Site            order(48..60,62..67)
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206719"
     Site            68..85
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206719"
     Site            68..71
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206719"
     Site            127..130
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206719"
     Site            161..163
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206719"
     Site            order(181..184,190..192)
                     /site_type="active"
                     /note="putative nuclear localization signal [active]"
                     /db_xref="CDD:206719"
     CDS             1..192
                     /gene="ARL4C"
                     /coded_by="XM_041465802.1:179..757"
                     /db_xref="GeneID:121352657"
ORIGIN      
        1 mgnissnisa fqslhivmlg ldsagkttvl yrlkfnefvn tvptigfnte kirlsngtak
       61 gischfwdvg gqeklrplwk sysrctdgii yvvdsvdvdr leeaktelhk vtkfaenqgt
      121 pllviankqd lpkslpvaei ekqlalhelt psttyhiqpa caiigeglte gmdklyemil
      181 krrkslkqkk kr
//
LOCUS       XP_041321738             566 aa            linear   VRT 06-MAY-2021
DEFINITION  splicing factor, arginine/serine-rich 19, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321738
VERSION     XP_041321738.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465804.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518263.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>566
                     /product="splicing factor, arginine/serine-rich 19"
     Region          <136..>421
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..566
                     /gene="SCAF1"
                     /coded_by="XM_041465804.1:1..>1699"
                     /db_xref="GeneID:121352660"
ORIGIN      
        1 mgnfgaklgn fgwkwgiqgg ngefwgdrsp saasrkkskr srerggsgaa awagakkape
       61 papkskerhr rrgsrsrsrr rswsrrsrsr ekrrrrrsgs sgrsrhkekh rgekkkkkqr
      121 srsrerrgsr rdgegkaaek seaarrrepr avvppsvqel ndsdlfaikr titvnrraag
      181 tpepkrevly dseglsfegf sdrehaefpg rktearpapp epgkkekerk rsrpeerpag
      241 wekykkkfkd yaepaaaeag kskekqreks grkgktgggh kegaetaapk tpaavprkvk
      301 lqskvsvlir egvsstttpg kdggagggag igvkfarnae sraaflkaee kaekatpknd
      361 ggqardagak prkakppkvk ggvkkvkvka kgetrkkrkt kvksgggalk kskadscsqs
      421 agtpphrlpp kpdpawsgse ksaggstpkp psppraaaga pkpapvsaaa apaereltpd
      481 sqtvdssckt pdvsflpeeg aggppqaagt egsgsgdppg gepeadsrcg egkeeaprva
      541 aaaapgaaag wslqggvdca tsgvla
//
LOCUS       XP_041321739             137 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L28 [Pyrgilauda ruficollis].
ACCESSION   XP_041321739
VERSION     XP_041321739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518307.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="60S ribosomal protein L28"
                     /calculated_mol_wt=15683
     Region          5..120
                     /region_name="Ribosomal_L28e"
                     /note="Ribosomal L28e protein family; pfam01778"
                     /db_xref="CDD:460323"
     CDS             1..137
                     /gene="RPL28"
                     /coded_by="XM_041465805.1:137..550"
                     /db_xref="GeneID:121352661"
ORIGIN      
        1 msahlqwmvv rncssfllkr nnqtystepn nlkarnsfry nglihrktvg vepapdgkgi
       61 vvvlkkrsgq rkpatsyvrv rirrdargsl rslrhliskn ryrrdlrmaa lrrasailrs
      121 qkpvvvrkkr vraakap
//
LOCUS       XP_041321740             612 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA polymerase II elongation factor ELL [Pyrgilauda ruficollis].
ACCESSION   XP_041321740
VERSION     XP_041321740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..612
                     /product="RNA polymerase II elongation factor ELL"
                     /calculated_mol_wt=68371
     Region          7..285
                     /region_name="ELL"
                     /note="RNA polymerase II elongation factor ELL; pfam10390"
                     /db_xref="CDD:463068"
     Region          508..609
                     /region_name="Occludin_ELL"
                     /note="Occludin homology domain; pfam07303"
                     /db_xref="CDD:462140"
     CDS             1..612
                     /gene="ELL"
                     /coded_by="XM_041465806.1:48..1886"
                     /db_xref="GeneID:121352662"
ORIGIN      
        1 maalqaergy glscgrlgrg trvsvfhvkl tesalrafes yqackdavts kpviqfqgsq
       61 ghiaiprpdr paevrtftfy lsnigkdspq gsfdciqqyv ssngnihldc lgsiqdkitv
      121 catddsyqka rqsmaqaeee trsrsaivik pggryvgkkv qvrkpapgas davpsrkrpt
      181 pvnlasaikr gnsaisqrpf kdrvvhllal kpykkpelil rlqkdglsqq dkdlldnllq
      241 qvanlsakds tftlkdcvyk evqkdwpgys egdqqllkri lvrklcqpqn sgafqgeaps
      301 lsppkdtlns ssppqkrplp vefidplank kprishlahr tqptlngkln ssngkdslap
      361 palppalpep pvssssslpa lelprphdpl sdvsndlthn grdcesstep perlshplpt
      421 dcaqsskhnc gsyvkskkks kkhkdkeker kekkseekck eekqncevik nadlvsvpqe
      481 qvpglngtcn nssvptstse mpdyllkyaa issseqrqsy kndfnaeyne yrdlharier
      541 itrrftqlda klkqllqgse eyktihdqil qeyrkikktn pnysqeknrc eylhnklahi
      601 kkliaeydqq qf
//
LOCUS       XP_041321741             325 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial coenzyme A transporter SLC25A42 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321741
VERSION     XP_041321741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465807.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="mitochondrial coenzyme A transporter SLC25A42"
                     /calculated_mol_wt=35947
     Region          31..296
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..325
                     /gene="SLC25A42"
                     /coded_by="XM_041465807.1:89..1066"
                     /db_xref="GeneID:121352663"
ORIGIN      
        1 mgngvregpv efqrdvepvt aripaednqe kkkvlnslms galagavakt avapldrtki
       61 mfqvsskrfs akeayrliyh tylnegfwsl wrgnsatmvr vipyaaiqfc aheeykqilg
      121 nyygfqgkal tpfprfiags lagttaamlt ypldmvrarm avtpkemyss ivhvfirisr
      181 eeglktlyrg ftptilgvip yaglsfftye tlkkvhaehs gkaqpspper llfgacagli
      241 gqsasypldv vrrrmqtagv lghsyssill tmqdivreeg lvrglykgls mnwvkgpiav
      301 gisfttfdlt qillrklqhg pgler
//
LOCUS       XP_041321742             325 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial coenzyme A transporter SLC25A42 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321742
VERSION     XP_041321742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="mitochondrial coenzyme A transporter SLC25A42"
                     /calculated_mol_wt=35947
     Region          31..296
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..325
                     /gene="SLC25A42"
                     /coded_by="XM_041465808.1:738..1715"
                     /db_xref="GeneID:121352663"
ORIGIN      
        1 mgngvregpv efqrdvepvt aripaednqe kkkvlnslms galagavakt avapldrtki
       61 mfqvsskrfs akeayrliyh tylnegfwsl wrgnsatmvr vipyaaiqfc aheeykqilg
      121 nyygfqgkal tpfprfiags lagttaamlt ypldmvrarm avtpkemyss ivhvfirisr
      181 eeglktlyrg ftptilgvip yaglsfftye tlkkvhaehs gkaqpspper llfgacagli
      241 gqsasypldv vrrrmqtagv lghsyssill tmqdivreeg lvrglykgls mnwvkgpiav
      301 gisfttfdlt qillrklqhg pgler
//
LOCUS       XP_041321743             467 aa            linear   VRT 06-MAY-2021
DEFINITION  armadillo repeat-containing protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321743
VERSION     XP_041321743.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465809.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="armadillo repeat-containing protein 6"
                     /calculated_mol_wt=50231
     Region          <266..>407
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     CDS             1..467
                     /gene="ARMC6"
                     /coded_by="XM_041465809.1:164..1567"
                     /db_xref="GeneID:121352665"
ORIGIN      
        1 mgskqiaqet fddavqenit efemepeeav reavqqfeaq gvdlsnivka vrppasengq
       61 rqkhqilltl eclgravaeq dvaqlpqqls afaaqckeql afrhlagqng aypavlsacq
      121 laagdrdlll qafstlgall dgqpdlldaa gqelllrslr errgdaevtl agircvrhac
      181 lkhehnrqgf vkggilpllt gaitqhgssa elvrmaasal rvmtfdddir vpfghahdha
      241 kmivlendgl rvlieaakaf rdnsgvlsel catlsrlsvr nefcqeivdl gglnfmvtll
      301 adcmehpdvv kqvlsairav agnddvkdai veagatdliv laishhlgnp qiceqgcaal
      361 cmlalrkpen csvimesgga laalqamkah prevavqkqa cmlirnlvar srelcgpila
      421 lgaevliaea raahrdcddv araalrdlgc kvelrelwtg qkgslaq
//
LOCUS       XP_041321744             467 aa            linear   VRT 06-MAY-2021
DEFINITION  armadillo repeat-containing protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321744
VERSION     XP_041321744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="armadillo repeat-containing protein 6"
                     /calculated_mol_wt=50231
     Region          <266..>407
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     CDS             1..467
                     /gene="ARMC6"
                     /coded_by="XM_041465810.1:188..1591"
                     /db_xref="GeneID:121352665"
ORIGIN      
        1 mgskqiaqet fddavqenit efemepeeav reavqqfeaq gvdlsnivka vrppasengq
       61 rqkhqilltl eclgravaeq dvaqlpqqls afaaqckeql afrhlagqng aypavlsacq
      121 laagdrdlll qafstlgall dgqpdlldaa gqelllrslr errgdaevtl agircvrhac
      181 lkhehnrqgf vkggilpllt gaitqhgssa elvrmaasal rvmtfdddir vpfghahdha
      241 kmivlendgl rvlieaakaf rdnsgvlsel catlsrlsvr nefcqeivdl gglnfmvtll
      301 adcmehpdvv kqvlsairav agnddvkdai veagatdliv laishhlgnp qiceqgcaal
      361 cmlalrkpen csvimesgga laalqamkah prevavqkqa cmlirnlvar srelcgpila
      421 lgaevliaea raahrdcddv araalrdlgc kvelrelwtg qkgslaq
//
LOCUS       XP_041321745             467 aa            linear   VRT 06-MAY-2021
DEFINITION  armadillo repeat-containing protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321745
VERSION     XP_041321745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="armadillo repeat-containing protein 6"
                     /calculated_mol_wt=50231
     Region          <266..>407
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     CDS             1..467
                     /gene="ARMC6"
                     /coded_by="XM_041465811.1:149..1552"
                     /db_xref="GeneID:121352665"
ORIGIN      
        1 mgskqiaqet fddavqenit efemepeeav reavqqfeaq gvdlsnivka vrppasengq
       61 rqkhqilltl eclgravaeq dvaqlpqqls afaaqckeql afrhlagqng aypavlsacq
      121 laagdrdlll qafstlgall dgqpdlldaa gqelllrslr errgdaevtl agircvrhac
      181 lkhehnrqgf vkggilpllt gaitqhgssa elvrmaasal rvmtfdddir vpfghahdha
      241 kmivlendgl rvlieaakaf rdnsgvlsel catlsrlsvr nefcqeivdl gglnfmvtll
      301 adcmehpdvv kqvlsairav agnddvkdai veagatdliv laishhlgnp qiceqgcaal
      361 cmlalrkpen csvimesgga laalqamkah prevavqkqa cmlirnlvar srelcgpila
      421 lgaevliaea raahrdcddv araalrdlgc kvelrelwtg qkgslaq
//
LOCUS       XP_041321747             467 aa            linear   VRT 06-MAY-2021
DEFINITION  armadillo repeat-containing protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321747
VERSION     XP_041321747.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465813.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="armadillo repeat-containing protein 6"
                     /calculated_mol_wt=50231
     Region          <266..>407
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     CDS             1..467
                     /gene="ARMC6"
                     /coded_by="XM_041465813.1:135..1538"
                     /db_xref="GeneID:121352665"
ORIGIN      
        1 mgskqiaqet fddavqenit efemepeeav reavqqfeaq gvdlsnivka vrppasengq
       61 rqkhqilltl eclgravaeq dvaqlpqqls afaaqckeql afrhlagqng aypavlsacq
      121 laagdrdlll qafstlgall dgqpdlldaa gqelllrslr errgdaevtl agircvrhac
      181 lkhehnrqgf vkggilpllt gaitqhgssa elvrmaasal rvmtfdddir vpfghahdha
      241 kmivlendgl rvlieaakaf rdnsgvlsel catlsrlsvr nefcqeivdl gglnfmvtll
      301 adcmehpdvv kqvlsairav agnddvkdai veagatdliv laishhlgnp qiceqgcaal
      361 cmlalrkpen csvimesgga laalqamkah prevavqkqa cmlirnlvar srelcgpila
      421 lgaevliaea raahrdcddv araalrdlgc kvelrelwtg qkgslaq
//
LOCUS       XP_041321748             255 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-3A [Pyrgilauda ruficollis].
ACCESSION   XP_041321748
VERSION     XP_041321748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="ras-related protein Rab-3A"
                     /calculated_mol_wt=28544
     Region          57..221
                     /region_name="Rab3"
                     /note="Rab GTPase family 3 contains Rab3A, Rab3B, Rab3C
                     and Rab3D; cd01865"
                     /db_xref="CDD:206657"
     Site            order(57,90,92..94,109,111,118..119,122,126,128..131,
                     160..162,218,221)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206657"
     Site            57..59
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206657"
     Site            64..71
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206657"
     Site            order(66..72,82..83,86,88..89,115,170..171,173..174,
                     200..202)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206657"
     Site            order(72..83,86..88)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206657"
     Site            order(82,87..95)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206657"
     Site            order(87,91..98,105,107)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206657"
     Site            89
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206657"
     Site            order(90..91,93,111..112,119,121,123..125)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206657"
     Site            90..94
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206657"
     Site            107..111
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206657"
     Site            112..115
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206657"
     Site            order(115,117..127)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206657"
     Site            118..123
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206657"
     Site            126..130
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206657"
     Site            135..140
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206657"
     Site            158..167
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206657"
     Site            170..173
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206657"
     Site            200..202
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206657"
     Site            216..221
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206657"
     CDS             1..255
                     /gene="RAB3A"
                     /coded_by="XM_041465814.1:136..903"
                     /db_xref="GeneID:121352666"
ORIGIN      
        1 maapspilsq nvpdpcweta psgarhrhgl sptlqmasat dsrygqkess dqnfdymfki
       61 liignssvgk tsflfryadd sftpafvstv gidfkvktiy rndkriklqi wdtagqeryr
      121 tittayyrga mgfilmydit neesfnavqd wstqiktysw dnaqvllvgn kcdmedervv
      181 ssekgrqlae hlgfeffeas akdninvkqt ferlvdiice kmsesldtad pavtgakqgp
      241 qltdqqapph qdcac
//
LOCUS       XP_041321749             410 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321749
VERSION     XP_041321749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="peptidyl-prolyl cis-trans isomerase FKBP8
                     isoform X1"
                     /calculated_mol_wt=44411
     Region          110..197
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          217..245
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(218,221..222,225..226,228,269,272..273,276..277,
                     279..280,303,306..307,310..311,314)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          223..>342
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          259..297
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          302..330
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          336..364
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..410
                     /gene="FKBP8"
                     /coded_by="XM_041465815.1:198..1430"
                     /db_xref="GeneID:121352667"
ORIGIN      
        1 massgeeprs gspgragagt eaaadaaqld taedfevlee eeeeeeeded dlselppled
       61 vgrpaappre daqppervgg daagdpqewl dvlgngllkk ktlvpgqgve srpqkgqdvt
      121 irlkatledg tvveedpalt ftlgdcdvlq aldlcvqlle mgetalivsd akycygaqgr
      181 speippnasl tlevellaar dapdlellsg kekiqlanrk rergnffyqq adyvlainsy
      241 dialrivgss skvdfspdee aelldvkvkc lnnlaasqlk ldhfkaalks cnlvlehqpg
      301 nikalfrkgk vlaqqgeyre aipilkaalk lepsnktiha elsklvkkha dqrnvetemy
      361 rkmlgnpsta stprkckdkl pwsipwkwlf gataialggv alsvviaarn
//
LOCUS       XP_041321750             410 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321750
VERSION     XP_041321750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="peptidyl-prolyl cis-trans isomerase FKBP8
                     isoform X2"
                     /calculated_mol_wt=44411
     Region          110..197
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          217..245
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(218,221..222,225..226,228,269,272..273,276..277,
                     279..280,303,306..307,310..311,314)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          223..>342
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          259..297
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          302..330
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          336..364
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..410
                     /gene="FKBP8"
                     /coded_by="XM_041465816.1:183..1415"
                     /db_xref="GeneID:121352667"
ORIGIN      
        1 massgeeprs gspgragagt eaaadaaqld taedfevlee eeeeeeeded dlselppled
       61 vgrpaappre daqppervgg daagdpqewl dvlgngllkk ktlvpgqgve srpqkgqdvt
      121 irlkatledg tvveedpalt ftlgdcdvlq aldlcvqlle mgetalivsd akycygaqgr
      181 speippnasl tlevellaar dapdlellsg kekiqlanrk rergnffyqq adyvlainsy
      241 dialrivgss skvdfspdee aelldvkvkc lnnlaasqlk ldhfkaalks cnlvlehqpg
      301 nikalfrkgk vlaqqgeyre aipilkaalk lepsnktiha elsklvkkha dqrnvetemy
      361 rkmlgnpsta stprkckdkl pwsipwkwlf gataialggv alsvviaarn
//
LOCUS       XP_041321751             410 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321751
VERSION     XP_041321751.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465817.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="peptidyl-prolyl cis-trans isomerase FKBP8
                     isoform X1"
                     /calculated_mol_wt=44411
     Region          110..197
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          217..245
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(218,221..222,225..226,228,269,272..273,276..277,
                     279..280,303,306..307,310..311,314)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          223..>342
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          259..297
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          302..330
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          336..364
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..410
                     /gene="FKBP8"
                     /coded_by="XM_041465817.1:33..1265"
                     /db_xref="GeneID:121352667"
ORIGIN      
        1 massgeeprs gspgragagt eaaadaaqld taedfevlee eeeeeeeded dlselppled
       61 vgrpaappre daqppervgg daagdpqewl dvlgngllkk ktlvpgqgve srpqkgqdvt
      121 irlkatledg tvveedpalt ftlgdcdvlq aldlcvqlle mgetalivsd akycygaqgr
      181 speippnasl tlevellaar dapdlellsg kekiqlanrk rergnffyqq adyvlainsy
      241 dialrivgss skvdfspdee aelldvkvkc lnnlaasqlk ldhfkaalks cnlvlehqpg
      301 nikalfrkgk vlaqqgeyre aipilkaalk lepsnktiha elsklvkkha dqrnvetemy
      361 rkmlgnpsta stprkckdkl pwsipwkwlf gataialggv alsvviaarn
//
LOCUS       XP_041321752             410 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321752
VERSION     XP_041321752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465818.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="peptidyl-prolyl cis-trans isomerase FKBP8
                     isoform X2"
                     /calculated_mol_wt=44411
     Region          110..197
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          217..245
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(218,221..222,225..226,228,269,272..273,276..277,
                     279..280,303,306..307,310..311,314)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          223..>342
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          259..297
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          302..330
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          336..364
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..410
                     /gene="FKBP8"
                     /coded_by="XM_041465818.1:199..1431"
                     /db_xref="GeneID:121352667"
ORIGIN      
        1 massgeeprs gspgragagt eaaadaaqld taedfevlee eeeeeeeded dlselppled
       61 vgrpaappre daqppervgg daagdpqewl dvlgngllkk ktlvpgqgve srpqkgqdvt
      121 irlkatledg tvveedpalt ftlgdcdvlq aldlcvqlle mgetalivsd akycygaqgr
      181 speippnasl tlevellaar dapdlellsg kekiqlanrk rergnffyqq adyvlainsy
      241 dialrivgss skvdfspdee aelldvkvkc lnnlaasqlk ldhfkaalks cnlvlehqpg
      301 nikalfrkgk vlaqqgeyre aipilkaalk lepsnktiha elsklvkkha dqrnvetemy
      361 rkmlgnpsta stprkckdkl pwsipwkwlf gataialggv alsvviaarn
//
LOCUS       XP_041321753             410 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321753
VERSION     XP_041321753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="peptidyl-prolyl cis-trans isomerase FKBP8
                     isoform X2"
                     /calculated_mol_wt=44411
     Region          110..197
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          217..245
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(218,221..222,225..226,228,269,272..273,276..277,
                     279..280,303,306..307,310..311,314)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          223..>342
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          259..297
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          302..330
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          336..364
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..410
                     /gene="FKBP8"
                     /coded_by="XM_041465819.1:34..1266"
                     /db_xref="GeneID:121352667"
ORIGIN      
        1 massgeeprs gspgragagt eaaadaaqld taedfevlee eeeeeeeded dlselppled
       61 vgrpaappre daqppervgg daagdpqewl dvlgngllkk ktlvpgqgve srpqkgqdvt
      121 irlkatledg tvveedpalt ftlgdcdvlq aldlcvqlle mgetalivsd akycygaqgr
      181 speippnasl tlevellaar dapdlellsg kekiqlanrk rergnffyqq adyvlainsy
      241 dialrivgss skvdfspdee aelldvkvkc lnnlaasqlk ldhfkaalks cnlvlehqpg
      301 nikalfrkgk vlaqqgeyre aipilkaalk lepsnktiha elsklvkkha dqrnvetemy
      361 rkmlgnpsta stprkckdkl pwsipwkwlf gataialggv alsvviaarn
//
LOCUS       XP_041321754             408 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321754
VERSION     XP_041321754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465820.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="peptidyl-prolyl cis-trans isomerase FKBP8
                     isoform X3"
                     /calculated_mol_wt=44153
     Region          108..195
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          215..243
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(216,219..220,223..224,226,267,270..271,274..275,
                     277..278,301,304..305,308..309,312)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          221..>340
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          257..295
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          300..328
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          334..362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..408
                     /gene="FKBP8"
                     /coded_by="XM_041465820.1:183..1409"
                     /db_xref="GeneID:121352667"
ORIGIN      
        1 massgeeprs gspgragagt eaaadaaqld taedfevlee eeeeededdl selppledvg
       61 rpaappreda qppervggda agdpqewldv lgngllkkkt lvpgqgvesr pqkgqdvtir
      121 lkatledgtv veedpaltft lgdcdvlqal dlcvqllemg etalivsdak ycygaqgrsp
      181 eippnasltl evellaarda pdlellsgke kiqlanrkre rgnffyqqad yvlainsydi
      241 alrivgsssk vdfspdeeae lldvkvkcln nlaasqlkld hfkaalkscn lvlehqpgni
      301 kalfrkgkvl aqqgeyreai pilkaalkle psnktihael sklvkkhadq rnvetemyrk
      361 mlgnpstast prkckdklpw sipwkwlfga taialggval svviaarn
//
LOCUS       XP_041321756             128 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-60S ribosomal protein L40 [Pyrgilauda ruficollis].
ACCESSION   XP_041321756
VERSION     XP_041321756.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465822.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..128
                     /product="ubiquitin-60S ribosomal protein L40"
                     /calculated_mol_wt=14608
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          79..126
                     /region_name="Ribosomal_L40e"
                     /note="Ribosomal L40e family; pfam01020"
                     /db_xref="CDD:395807"
     CDS             1..128
                     /gene="UBA52"
                     /coded_by="XM_041465822.1:67..453"
                     /db_xref="GeneID:121352668"
ORIGIN      
        1 mqifvktltg ktitlevepn dtienvkaki qdkegippdq qrlifagkql edgrtladyn
       61 iqkestlhlv lrlrggiiep slrqlaqkyn cdkmicrkcy arlhpravnc rkkkcghtnn
      121 lrpkkkvk
//
LOCUS       XP_041321757             128 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-60S ribosomal protein L40 [Pyrgilauda ruficollis].
ACCESSION   XP_041321757
VERSION     XP_041321757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..128
                     /product="ubiquitin-60S ribosomal protein L40"
                     /calculated_mol_wt=14608
     Region          1..76
                     /region_name="Ubl_ubiquitin"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin;
                     cd01803"
                     /db_xref="CDD:340501"
     Site            order(6..9,11,34..37,40,42,44,46..49,68..76)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:340501"
     Site            order(8..12,31..35,40,42,44,46..49,68,70..76)
                     /site_type="other"
                     /note="E1 interaction site [polypeptide binding]"
                     /db_xref="CDD:340501"
     Region          79..126
                     /region_name="Ribosomal_L40e"
                     /note="Ribosomal L40e family; pfam01020"
                     /db_xref="CDD:395807"
     CDS             1..128
                     /gene="UBA52"
                     /coded_by="XM_041465823.1:40..426"
                     /db_xref="GeneID:121352668"
ORIGIN      
        1 mqifvktltg ktitlevepn dtienvkaki qdkegippdq qrlifagkql edgrtladyn
       61 iqkestlhlv lrlrggiiep slrqlaqkyn cdkmicrkcy arlhpravnc rkkkcghtnn
      121 lrpkkkvk
//
LOCUS       XP_041321758             774 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321758
VERSION     XP_041321758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..774
                     /product="tRNA-dihydrouridine(47) synthase
                     [NAD(P)(+)]-like isoform X1"
                     /calculated_mol_wt=84991
     Region          100..124
                     /region_name="zf-CCCH_4"
                     /note="CCCH-type zinc finger; pfam18044"
                     /db_xref="CDD:465626"
     Region          <243..412
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          430..662
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(434..436,460,489,517,559,589,621,623,644..645)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(489,520..521,559,561,588..589,591..592,622..623,645)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(520,561,589,591)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(521,559,588,592,622..623)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     CDS             1..774
                     /gene="DUS3L"
                     /coded_by="XM_041465824.1:6..2330"
                     /db_xref="GeneID:121352669"
ORIGIN      
        1 maaapgvapv rarfltskeq fhaylragge eeeeekeeke eeeqvseppa krvkadelgq
       61 dgesqgnagg eekerpekkr argqnksrpc mkpscyeqsr lcpsvtqgra gqchfgprcr
      121 flhdvseyla akpadlgqrc vlfdtfglcp ygvtcrfgqa hlgdghqnlv naalarqweg
      181 kvlvrnglsk elqqqlrkrr fsfqkaeefl rglragkggk aaggstevsn ctarqeglrd
      241 spvlqeqgee prpealqgsq raegaakpea lqssqgaega akseilqgsp etecapklea
      301 lqssqgaega akseilqgsp etecapklea lqssqgaega pepealqssq gaegaaksei
      361 lqgspgteda prpetlqssq gaecapkpea lqnsqgaega psiptvgplt deditklrpc
      421 ekkkleiqgk lylaplttcg nlpfrrickr fgadvtcgem avctnllqgq ssewallkrh
      481 htedifgvql egafpdtmtk caellnrtie vdfvdinvgc pidlvykkgg gcalmtrsnk
      541 feqivrgmns vldvpltvki rtgvqekvnv ahkiiprire wgaamvtlhg rsreqrytrs
      601 adwpyiaeca rlaspmplfg ngdilsyeda nramqmgvsg imiargalik pwlfteikeq
      661 rhwdissser fdilkdftny glehwgsdtq gvektrkfll ewlsflcryi pvgllehlpq
      721 kinerppyyl grdyletlma sqnvddwiki selllgpvpp sftflpkhka nsyr
//
LOCUS       XP_041321759             774 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321759
VERSION     XP_041321759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..774
                     /product="tRNA-dihydrouridine(47) synthase
                     [NAD(P)(+)]-like isoform X1"
                     /calculated_mol_wt=84991
     Region          100..124
                     /region_name="zf-CCCH_4"
                     /note="CCCH-type zinc finger; pfam18044"
                     /db_xref="CDD:465626"
     Region          <243..412
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          430..662
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(434..436,460,489,517,559,589,621,623,644..645)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(489,520..521,559,561,588..589,591..592,622..623,645)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(520,561,589,591)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(521,559,588,592,622..623)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     CDS             1..774
                     /gene="DUS3L"
                     /coded_by="XM_041465825.1:6..2330"
                     /db_xref="GeneID:121352669"
ORIGIN      
        1 maaapgvapv rarfltskeq fhaylragge eeeeekeeke eeeqvseppa krvkadelgq
       61 dgesqgnagg eekerpekkr argqnksrpc mkpscyeqsr lcpsvtqgra gqchfgprcr
      121 flhdvseyla akpadlgqrc vlfdtfglcp ygvtcrfgqa hlgdghqnlv naalarqweg
      181 kvlvrnglsk elqqqlrkrr fsfqkaeefl rglragkggk aaggstevsn ctarqeglrd
      241 spvlqeqgee prpealqgsq raegaakpea lqssqgaega akseilqgsp etecapklea
      301 lqssqgaega akseilqgsp etecapklea lqssqgaega pepealqssq gaegaaksei
      361 lqgspgteda prpetlqssq gaecapkpea lqnsqgaega psiptvgplt deditklrpc
      421 ekkkleiqgk lylaplttcg nlpfrrickr fgadvtcgem avctnllqgq ssewallkrh
      481 htedifgvql egafpdtmtk caellnrtie vdfvdinvgc pidlvykkgg gcalmtrsnk
      541 feqivrgmns vldvpltvki rtgvqekvnv ahkiiprire wgaamvtlhg rsreqrytrs
      601 adwpyiaeca rlaspmplfg ngdilsyeda nramqmgvsg imiargalik pwlfteikeq
      661 rhwdissser fdilkdftny glehwgsdtq gvektrkfll ewlsflcryi pvgllehlpq
      721 kinerppyyl grdyletlma sqnvddwiki selllgpvpp sftflpkhka nsyr
//
LOCUS       XP_041321760             774 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321760
VERSION     XP_041321760.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465826.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..774
                     /product="tRNA-dihydrouridine(47) synthase
                     [NAD(P)(+)]-like isoform X1"
                     /calculated_mol_wt=84991
     Region          100..124
                     /region_name="zf-CCCH_4"
                     /note="CCCH-type zinc finger; pfam18044"
                     /db_xref="CDD:465626"
     Region          <243..412
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          430..662
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(434..436,460,489,517,559,589,621,623,644..645)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(489,520..521,559,561,588..589,591..592,622..623,645)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(520,561,589,591)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(521,559,588,592,622..623)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     CDS             1..774
                     /gene="DUS3L"
                     /coded_by="XM_041465826.1:6..2330"
                     /db_xref="GeneID:121352669"
ORIGIN      
        1 maaapgvapv rarfltskeq fhaylragge eeeeekeeke eeeqvseppa krvkadelgq
       61 dgesqgnagg eekerpekkr argqnksrpc mkpscyeqsr lcpsvtqgra gqchfgprcr
      121 flhdvseyla akpadlgqrc vlfdtfglcp ygvtcrfgqa hlgdghqnlv naalarqweg
      181 kvlvrnglsk elqqqlrkrr fsfqkaeefl rglragkggk aaggstevsn ctarqeglrd
      241 spvlqeqgee prpealqgsq raegaakpea lqssqgaega akseilqgsp etecapklea
      301 lqssqgaega akseilqgsp etecapklea lqssqgaega pepealqssq gaegaaksei
      361 lqgspgteda prpetlqssq gaecapkpea lqnsqgaega psiptvgplt deditklrpc
      421 ekkkleiqgk lylaplttcg nlpfrrickr fgadvtcgem avctnllqgq ssewallkrh
      481 htedifgvql egafpdtmtk caellnrtie vdfvdinvgc pidlvykkgg gcalmtrsnk
      541 feqivrgmns vldvpltvki rtgvqekvnv ahkiiprire wgaamvtlhg rsreqrytrs
      601 adwpyiaeca rlaspmplfg ngdilsyeda nramqmgvsg imiargalik pwlfteikeq
      661 rhwdissser fdilkdftny glehwgsdtq gvektrkfll ewlsflcryi pvgllehlpq
      721 kinerppyyl grdyletlma sqnvddwiki selllgpvpp sftflpkhka nsyr
//
LOCUS       XP_041321761             759 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321761
VERSION     XP_041321761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..759
                     /product="tRNA-dihydrouridine(47) synthase
                     [NAD(P)(+)]-like isoform X2"
                     /calculated_mol_wt=83466
     Region          100..124
                     /region_name="zf-CCCH_4"
                     /note="CCCH-type zinc finger; pfam18044"
                     /db_xref="CDD:465626"
     Region          <243..393
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          415..647
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(419..421,445,474,502,544,574,606,608,629..630)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(474,505..506,544,546,573..574,576..577,607..608,630)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(505,546,574,576)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(506,544,573,577,607..608)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     CDS             1..759
                     /gene="DUS3L"
                     /coded_by="XM_041465827.1:6..2285"
                     /db_xref="GeneID:121352669"
ORIGIN      
        1 maaapgvapv rarfltskeq fhaylragge eeeeekeeke eeeqvseppa krvkadelgq
       61 dgesqgnagg eekerpekkr argqnksrpc mkpscyeqsr lcpsvtqgra gqchfgprcr
      121 flhdvseyla akpadlgqrc vlfdtfglcp ygvtcrfgqa hlgdghqnlv naalarqweg
      181 kvlvrnglsk elqqqlrkrr fsfqkaeefl rglragkggk aaggstevsn ctarqeglrd
      241 spvlqeqgee prpealqgsq raegaakpea lqssqgaega akseilqgsp etecapklea
      301 lqssqgaega akseilqgsp etecapklea lqssqgaega pepealqssq gaegaaksei
      361 lqgspgteda prpetlqssq gaegapsipt vgpltdedit klrpcekkkl eiqgklylap
      421 lttcgnlpfr rickrfgadv tcgemavctn llqgqssewa llkrhhtedi fgvqlegafp
      481 dtmtkcaell nrtievdfvd invgcpidlv ykkgggcalm trsnkfeqiv rgmnsvldvp
      541 ltvkirtgvq ekvnvahkii prirewgaam vtlhgrsreq rytrsadwpy iaecarlasp
      601 mplfgngdil syedanramq mgvsgimiar galikpwlft eikeqrhwdi ssserfdilk
      661 dftnyglehw gsdtqgvekt rkfllewlsf lcryipvgll ehlpqkiner ppyylgrdyl
      721 etlmasqnvd dwikiselll gpvppsftfl pkhkansyr
//
LOCUS       XP_041321762             473 aa            linear   VRT 06-MAY-2021
DEFINITION  mpv17-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321762
VERSION     XP_041321762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="mpv17-like protein 2 isoform X1"
                     /calculated_mol_wt=48461
     CDS             1..473
                     /gene="MPV17L2"
                     /coded_by="XM_041465828.1:31..1452"
                     /db_xref="GeneID:121352670"
ORIGIN      
        1 mssgvtnsqd keqqcppsps aaphdqsdte lmfklqreas qrilkalgta wrvsaasprl
       61 gdpsgtsrvg ravipalltp imatstgnrs spttllppdq gvrdraglgh rgdpldhpql
      121 appqasgraa asvgvmaasc tsvgvmaasc tsvgvmaasc tsvgvmaasy aavavmaeag
      181 sgsrrchvtl arfrlrvavt pgrggggtrg epeapgtggg vregalgpsg gqpavtgpsp
      241 pcragravpc raqdaaalla vavhgpaaap hqhrelrgap gggglpaagv appqaprepa
      301 aagphclgpl mhywylwlds afpargvrsl rtvlkkvlid qlvaspsmga wyfvvpadps
      361 cprshrhagg pispgelgra egeilgilqg rlepvaggad pqlplraarl prgvrqrgdp
      421 glghlpvlpq tqapqlraga ttaepeqrrr lereqllqss lemdfwalws pps
//
LOCUS       XP_041321763             467 aa            linear   VRT 06-MAY-2021
DEFINITION  mpv17-like protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321763
VERSION     XP_041321763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="mpv17-like protein 2 isoform X2"
                     /calculated_mol_wt=49053
     CDS             1..467
                     /gene="MPV17L2"
                     /coded_by="XM_041465829.1:20..1423"
                     /db_xref="GeneID:121352670"
ORIGIN      
        1 mssgvtnsqd keqqcppsps aaphdqsdte lmfklqreas qrilkalgta wrvsaasprl
       61 gdpsgtsrvg ravipalltp imatstgnrs spttllppdq gvrdraglgh rgdpldhpql
      121 appqasgraa asvgvmaasc tsvgvmaasc tsvgvmaasc tsvgvmaasy aavavmaeag
      181 sgsrrchvtl arfrlrvavt pgrggggtrg epeapgtggg vregalgpsg avpcravprm
      241 llrswrslft grlllltntv scggllaagd clqqewhrrk hpesqlqlgr tgrmfvvgcs
      301 lgplmhywyl wldsafparg vrslrtvlkk vlidqlvasp smgawyfvvp adpscprshr
      361 haggpispge lgraegeilg ilqgrlepva ggadpqlplr aarlprgvrq rgdpglghlp
      421 vlpqtqapql ragattaepe qrrrlereql lqsslemdfw alwspps
//
LOCUS       XP_041321764             441 aa            linear   VRT 06-MAY-2021
DEFINITION  mpv17-like protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321764
VERSION     XP_041321764.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465830.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="mpv17-like protein 2 isoform X3"
                     /calculated_mol_wt=45688
     Region          357..418
                     /region_name="Mpv17_PMP22"
                     /note="Mpv17 / PMP22 family; pfam04117"
                     /db_xref="CDD:461182"
     CDS             1..441
                     /gene="MPV17L2"
                     /coded_by="XM_041465830.1:27..1352"
                     /db_xref="GeneID:121352670"
ORIGIN      
        1 mssgvtnsqd keqqcppsps aaphdqsdte lmfklqreas qrilkalgta wrvsaasprl
       61 gdpsgtsrvg ravipalltp imatstgnrs spttllppdq gvrdraglgh rgdpldhpql
      121 appqasgraa asvgvmaasc tsvgvmaasc tsvgvmaasc tsvgvmaasy aavavmaeag
      181 sgsrrchvtl arfrlrvavt pgrggggtrg epeapgtggg vregalgpsg gqpavtgpsp
      241 pcragravpc raqdaaalla vavhgpaaap hqhrelrgap gggglpaagv appqaprepa
      301 aagphclgpl mhywylwlds afpargvrsl rtvlkkvlid qlvaspsmga wyfvaigtle
      361 gqslqeswde lkekfwefyk adwslwpaaq ilnflfvppa yrvvyvnvvt lgwdtylsyl
      421 khrprssgqe pprqsqssag a
//
LOCUS       XP_041321765             435 aa            linear   VRT 06-MAY-2021
DEFINITION  mpv17-like protein 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321765
VERSION     XP_041321765.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465831.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..435
                     /product="mpv17-like protein 2 isoform X4"
                     /calculated_mol_wt=46280
     Region          351..412
                     /region_name="Mpv17_PMP22"
                     /note="Mpv17 / PMP22 family; pfam04117"
                     /db_xref="CDD:461182"
     CDS             1..435
                     /gene="MPV17L2"
                     /coded_by="XM_041465831.1:14..1321"
                     /db_xref="GeneID:121352670"
ORIGIN      
        1 mssgvtnsqd keqqcppsps aaphdqsdte lmfklqreas qrilkalgta wrvsaasprl
       61 gdpsgtsrvg ravipalltp imatstgnrs spttllppdq gvrdraglgh rgdpldhpql
      121 appqasgraa asvgvmaasc tsvgvmaasc tsvgvmaasc tsvgvmaasy aavavmaeag
      181 sgsrrchvtl arfrlrvavt pgrggggtrg epeapgtggg vregalgpsg avpcravprm
      241 llrswrslft grlllltntv scggllaagd clqqewhrrk hpesqlqlgr tgrmfvvgcs
      301 lgplmhywyl wldsafparg vrslrtvlkk vlidqlvasp smgawyfvai gtlegqslqe
      361 swdelkekfw efykadwslw paaqilnflf vppayrvvyv nvvtlgwdty lsylkhrprs
      421 sgqepprqsq ssaga
//
LOCUS       XP_041321766             355 aa            linear   VRT 06-MAY-2021
DEFINITION  embryonic growth/differentiation factor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321766
VERSION     XP_041321766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="embryonic growth/differentiation factor 1"
                     /calculated_mol_wt=39306
     Region          <79..206
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Region          254..355
                     /region_name="TGF_beta_GDF1_3_like"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in embryonic growth/differentiation factor 1
                     (GDF1), factor 3 (GDF3) and similar proteins; cd13764"
                     /db_xref="CDD:381642"
     Site            order(259,261,265..266,268,278,280..282,299..300,303..304,
                     306..307,310,315..316,319,321..322,325,345..347,349,355)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381642"
     CDS             1..355
                     /gene="GDF1"
                     /coded_by="XM_041465832.1:1445..2512"
                     /db_xref="GeneID:121352672"
ORIGIN      
        1 mwllrslawa llspvlatel spqessllks lglsarpspk spvpvppvlw rifqkrktlp
       61 wpegepdscr veefnvpgni vrvfadqgrf lpagqpqgwl clrkllffnl saleegerlt
      121 maqlelqfhh nsyhgpssgq vlelrlypvs prgqpqpgrr pllersfvql rksllfnlsa
      181 alkdgelpgr nlsfvleisl sgraghagtp rslcastdaf aatslllvtl grqcqagrrr
      241 rsapsppvtp splckprrly isfsdvgwen wiiapqgyla nycrgdcpfp laaelnstnh
      301 avlqtmvhsl dpqgtpqpcc vpvrlspisi lyydnsdnvv lrhyedmvvd ecgcr
//
LOCUS       XP_041321767             741 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321767
VERSION     XP_041321767.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465833.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 4C
                     isoform X1"
                     /calculated_mol_wt=82330
     Region          120..234
                     /region_name="PDE4_UCR"
                     /note="Phosphodiesterase 4 upstream conserved regions
                     (UCR); pfam18100"
                     /db_xref="CDD:465648"
     Region          358..598
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..741
                     /gene="PDE4C"
                     /coded_by="XM_041465833.1:162..2387"
                     /db_xref="GeneID:121352673"
ORIGIN      
        1 mlptahcspg aspaasprss prnspvlfrk llmnqsirlq rrftvahplc fdlengppgr
       61 galdpqaspg aglvlqgtfs hgqrresfly rsdsdydlsp kamsrnssia sdlhgedmiv
      121 tpfaqvlasl rtvrsnlthl qdragikrgs ssslpsgska slsaedahqk lsretleeld
      181 wcldqletlq trhsvsemas nkfkrmlsre lthlsetsrs gnqvseyiss tfldkqheve
      241 ipsapakdke kerrkrpmsq isgvrklkhs sslatagipr fgvrteheal lakeledtnk
      301 wgldvfkvae ysgnrpltvi mysifqerdl mktfripvnt fitymltled hyhadvayhn
      361 slhaadvaqs thvllstpal eavftdleim aaifasaihd vdhpgvsnqf lintnselal
      421 myndasvlen hhlavgfkll qeencdifqn lsrkqrqtlr kmvidmvlat dmskhmnlla
      481 dlktmvetkk vtslgvllld nysdriqvlq nmvhcadlsn ptkplelyrq wtdrimveff
      541 hqgdrerekg meispmcdkh tasveksqvg fidfiahplw etwadlvhpd aqelldtled
      601 nrewyqsmip rspspppeap avspattdkf qfeltleeee eeegesdtep egaesplded
      661 nsgsktpgtd dsecadtkrl spgpgdrdsp vprprdvdnr qalegslpkd ggsgcsvpgp
      721 egsrglcldt egnvtflslg t
//
LOCUS       XP_041321768             740 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321768
VERSION     XP_041321768.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465834.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..740
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 4C
                     isoform X2"
                     /calculated_mol_wt=82259
     Region          120..233
                     /region_name="PDE4_UCR"
                     /note="Phosphodiesterase 4 upstream conserved regions
                     (UCR); pfam18100"
                     /db_xref="CDD:465648"
     Region          357..597
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..740
                     /gene="PDE4C"
                     /coded_by="XM_041465834.1:161..2383"
                     /db_xref="GeneID:121352673"
ORIGIN      
        1 mlptahcspg aspaasprss prnspvlfrk llmnqsirlq rrftvahplc fdlengppgr
       61 galdpqaspg aglvlqgtfs hgqrresfly rsdsdydlsp kamsrnssia sdlhgedmiv
      121 tpfaqvlasl rtvrsnlthl qdragikrgs ssslpsgska slsedahqkl sretleeldw
      181 cldqletlqt rhsvsemasn kfkrmlsrel thlsetsrsg nqvseyisst fldkqhevei
      241 psapakdkek errkrpmsqi sgvrklkhss slatagiprf gvrteheall akeledtnkw
      301 gldvfkvaey sgnrpltvim ysifqerdlm ktfripvntf itymltledh yhadvayhns
      361 lhaadvaqst hvllstpale avftdleima aifasaihdv dhpgvsnqfl intnselalm
      421 yndasvlenh hlavgfkllq eencdifqnl srkqrqtlrk mvidmvlatd mskhmnllad
      481 lktmvetkkv tslgvllldn ysdriqvlqn mvhcadlsnp tkplelyrqw tdrimveffh
      541 qgdrerekgm eispmcdkht asveksqvgf idfiahplwe twadlvhpda qelldtledn
      601 rewyqsmipr spspppeapa vspattdkfq feltleeeee eegesdtepe gaespldedn
      661 sgsktpgtdd secadtkrls pgpgdrdspv prprdvdnrq alegslpkdg gsgcsvpgpe
      721 gsrglcldte gnvtflslgt
//
LOCUS       XP_041321770             639 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321770
VERSION     XP_041321770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..639
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 4C
                     isoform X3"
                     /calculated_mol_wt=71287
     Region          18..132
                     /region_name="PDE4_UCR"
                     /note="Phosphodiesterase 4 upstream conserved regions
                     (UCR); pfam18100"
                     /db_xref="CDD:465648"
     Region          256..496
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..639
                     /gene="PDE4C"
                     /coded_by="XM_041465836.1:329..2248"
                     /db_xref="GeneID:121352673"
ORIGIN      
        1 msrnssiasd lhgedmivtp faqvlaslrt vrsnlthlqd ragikrgsss slpsgskasl
       61 saedahqkls retleeldwc ldqletlqtr hsvsemasnk fkrmlsrelt hlsetsrsgn
      121 qvseyisstf ldkqheveip sapakdkeke rrkrpmsqis gvrklkhsss latagiprfg
      181 vrtehealla keledtnkwg ldvfkvaeys gnrpltvimy sifqerdlmk tfripvntfi
      241 tymltledhy hadvayhnsl haadvaqsth vllstpalea vftdleimaa ifasaihdvd
      301 hpgvsnqfli ntnselalmy ndasvlenhh lavgfkllqe encdifqnls rkqrqtlrkm
      361 vidmvlatdm skhmnlladl ktmvetkkvt slgvllldny sdriqvlqnm vhcadlsnpt
      421 kplelyrqwt drimveffhq gdrerekgme ispmcdkhta sveksqvgfi dfiahplwet
      481 wadlvhpdaq elldtlednr ewyqsmiprs pspppeapav spattdkfqf eltleeeeee
      541 egesdtepeg aespldedns gsktpgtdds ecadtkrlsp gpgdrdspvp rprdvdnrqa
      601 legslpkdgg sgcsvpgpeg srglcldteg nvtflslgt
//
LOCUS       XP_041321771             707 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321771
VERSION     XP_041321771.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465837.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 4C
                     isoform X4"
                     /calculated_mol_wt=78647
     Region          86..200
                     /region_name="PDE4_UCR"
                     /note="Phosphodiesterase 4 upstream conserved regions
                     (UCR); pfam18100"
                     /db_xref="CDD:465648"
     Region          324..564
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..707
                     /gene="PDE4C"
                     /coded_by="XM_041465837.1:718..2841"
                     /db_xref="GeneID:121352673"
ORIGIN      
        1 mlpgsrypsr rhscigfdle ngppgrgald pqaspgaglv lqgtfshgqr resflyrsds
       61 dydlspkams rnssiasdlh gedmivtpfa qvlaslrtvr snlthlqdra gikrgssssl
      121 psgskaslsa edahqklsre tleeldwcld qletlqtrhs vsemasnkfk rmlsrelthl
      181 setsrsgnqv seyisstfld kqheveipsa pakdkekerr krpmsqisgv rklkhsssla
      241 tagiprfgvr teheallake ledtnkwgld vfkvaeysgn rpltvimysi fqerdlmktf
      301 ripvntfity mltledhyha dvayhnslha advaqsthvl lstpaleavf tdleimaaif
      361 asaihdvdhp gvsnqflint nselalmynd asvlenhhla vgfkllqeen cdifqnlsrk
      421 qrqtlrkmvi dmvlatdmsk hmnlladlkt mvetkkvtsl gvllldnysd riqvlqnmvh
      481 cadlsnptkp lelyrqwtdr imveffhqgd rerekgmeis pmcdkhtasv eksqvgfidf
      541 iahplwetwa dlvhpdaqel ldtlednrew yqsmiprsps pppeapavsp attdkfqfel
      601 tleeeeeeeg esdtepegae spldednsgs ktpgtddsec adtkrlspgp gdrdspvprp
      661 rdvdnrqale gslpkdggsg csvpgpegsr glcldtegnv tflslgt
//
LOCUS       XP_041321772             706 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321772
VERSION     XP_041321772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..706
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 4C
                     isoform X5"
                     /calculated_mol_wt=78576
     Region          86..199
                     /region_name="PDE4_UCR"
                     /note="Phosphodiesterase 4 upstream conserved regions
                     (UCR); pfam18100"
                     /db_xref="CDD:465648"
     Region          323..563
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..706
                     /gene="PDE4C"
                     /coded_by="XM_041465838.1:717..2837"
                     /db_xref="GeneID:121352673"
ORIGIN      
        1 mlpgsrypsr rhscigfdle ngppgrgald pqaspgaglv lqgtfshgqr resflyrsds
       61 dydlspkams rnssiasdlh gedmivtpfa qvlaslrtvr snlthlqdra gikrgssssl
      121 psgskaslse dahqklsret leeldwcldq letlqtrhsv semasnkfkr mlsrelthls
      181 etsrsgnqvs eyisstfldk qheveipsap akdkekerrk rpmsqisgvr klkhssslat
      241 agiprfgvrt eheallakel edtnkwgldv fkvaeysgnr pltvimysif qerdlmktfr
      301 ipvntfitym ltledhyhad vayhnslhaa dvaqsthvll stpaleavft dleimaaifa
      361 saihdvdhpg vsnqflintn selalmynda svlenhhlav gfkllqeenc difqnlsrkq
      421 rqtlrkmvid mvlatdmskh mnlladlktm vetkkvtslg vllldnysdr iqvlqnmvhc
      481 adlsnptkpl elyrqwtdri mveffhqgdr erekgmeisp mcdkhtasve ksqvgfidfi
      541 ahplwetwad lvhpdaqell dtlednrewy qsmiprspsp ppeapavspa ttdkfqfelt
      601 leeeeeeege sdtepegaes pldednsgsk tpgtddseca dtkrlspgpg drdspvprpr
      661 dvdnrqaleg slpkdggsgc svpgpegsrg lcldtegnvt flslgt
//
LOCUS       XP_041321773             560 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 4C isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321773
VERSION     XP_041321773.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465839.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..560
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 4C
                     isoform X6"
                     /calculated_mol_wt=56039
     CDS             1..560
                     /gene="PDE4C"
                     /coded_by="XM_041465839.1:288..1970"
                     /db_xref="GeneID:121352673"
ORIGIN      
        1 mtpgpfvptf prssvpvsry lpfprslcpk iptsqcprip rslcarfpvs prvrrdrgra
       61 gsryrgcftt agwemgggng rsvcgwgnfg gflpvpagsr rcgaaryrqg aappppgrik
      121 saapapggma rgalrllcca aallaaagle pgrgtdpait asqnssgtav spspsrsata
      181 tsqgtqsvsl sgpdsgrvha vptssttptt psstsasktp pislsspttp atpsstsgst
      241 spssasstrt ptpsktsrst ppssppsptt pttpsstsgs kpppsspssp ttpttphnis
      301 estppvsssn tttapssart pgsttplips snatmapppp htsvsrpteh psnsttppap
      361 sspkpsgpas pssptvspgp nststvttss rrtaatgsma gnseqhptel spavvvlisl
      421 avclllpgva vllvqlsrrg tppfqhldev pmvrggaggg agggaaragp sdrdqhgapp
      481 grsprpspll rfpaalprsr rgrpvgpgpg sgrgrrappf lrdpvaaaag lpvggggprp
      541 rargcpggvh hrgerpqqrr
//
LOCUS       XP_041321774             314 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor jun-D [Pyrgilauda ruficollis].
ACCESSION   XP_041321774
VERSION     XP_041321774.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465840.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="transcription factor jun-D"
                     /calculated_mol_wt=32383
     Region          2..221
                     /region_name="Jun"
                     /note="Jun-like transcription factor; pfam03957"
                     /db_xref="CDD:461108"
     Region          235..294
                     /region_name="bZIP_Jun"
                     /note="Basic leucine zipper (bZIP) domain of Jun proteins
                     and similar proteins: a DNA-binding and dimerization
                     domain; cd14696"
                     /db_xref="CDD:269844"
     Region          236..287
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269844"
     Site            order(240,242..244,246..251,253..255)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269844"
     Site            order(254..255,257..258,260..262,264..265,268..269,
                     271..272,274..276,278..279,282..283,286,289,292..294)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269844"
     CDS             1..314
                     /gene="JUND"
                     /coded_by="XM_041465840.1:143..1087"
                     /db_xref="GeneID:121352674"
ORIGIN      
        1 metpfyhddv lsglgsgfap ssgsnglllp fpggsmmkkd algmalpeqv aaalkapgaa
       61 sgeaagllgs aelgllklas pelerliiqs nglvtttpts gqflypkaaa seeqefaegf
      121 vkaledlhkq nqlgggaags gggagggggg gsggagelpa agmapeppvy anlstypavs
      181 yaadpgpfaa ppprlppppp ppplkdepqi vpevpsfges pplspidmdt qerikaerkr
      241 lrnriaaskc rkrklerisr leekvkslks qntelastas llreqvaqlk qkvlshvnsg
      301 cqllpqhqhq vpay
//
LOCUS       XP_041321775             138 aa            linear   VRT 06-MAY-2021
DEFINITION  U6 snRNA-associated Sm-like protein LSm4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321775
VERSION     XP_041321775.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465841.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..138
                     /product="U6 snRNA-associated Sm-like protein LSm4"
                     /calculated_mol_wt=15211
     Region          2..77
                     /region_name="LSm4"
                     /note="Like-Sm protein 4; cd01723"
                     /db_xref="CDD:212470"
     Site            order(7,10..11,16,18..20,23,25,30..33,36..37,39,58..70)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212470"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212470"
     Site            order(33,35,62)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212470"
     Site            58..69
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212470"
     CDS             1..138
                     /gene="LSM4"
                     /coded_by="XM_041465841.1:139..555"
                     /db_xref="GeneID:121352675"
ORIGIN      
        1 mlplsllkta qnhpmlvelk ngetynghlv scdnwmninl revictsrdg dkfwrmpecy
       61 irgstikylr ipdeiidmvk eevvskgrgr ggmqqqkqqk grgvggagrg vfggrgrgip
      121 gsgrgqqekk pgrqsakq
//
LOCUS       XP_041321776             132 aa            linear   VRT 06-MAY-2021
DEFINITION  pyroglutamyl-peptidase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321776
VERSION     XP_041321776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="pyroglutamyl-peptidase 1"
                     /calculated_mol_wt=14479
     Region          <1..116
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cl00237"
                     /db_xref="CDD:444776"
     Site            order(2..4,53,56..60,101..102,104,107)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(8,72,96)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(9..10,14,16,18,27..28,37..40,46,65..66,69)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            107
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..132
                     /gene="PGPEP1"
                     /coded_by="XM_041465842.1:148..546"
                     /db_xref="GeneID:121352676"
ORIGIN      
        1 mattvtlekc ghnvgykgld ncrfcpgsqc cveggpecid siidmdavcr rvsalgldvt
       61 vtiskdagry lcdftyytsl yqsrgrsafv hvpplgkpys aeqlgralqa iieemldfle
      121 hsedkincqh eh
//
LOCUS       XP_041321777             858 aa            linear   VRT 06-MAY-2021
DEFINITION  elongation factor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321777
VERSION     XP_041321777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..858
                     /product="elongation factor 2"
                     /calculated_mol_wt=95256
     Region          1..858
                     /region_name="PTZ00416"
                     /note="elongation factor 2; Provisional"
                     /db_xref="CDD:240409"
     CDS             1..858
                     /gene="EEF2"
                     /coded_by="XM_041465843.1:145..2721"
                     /db_xref="GeneID:121352677"
ORIGIN      
        1 mvnftvdqir aimdkkanir nmsviahvdh gkstltdslv ckagiiasar agetrftdtr
       61 kdeqerciti kstaislfye lsendlafik qskdgsgfli nlidspghvd fssevtaalr
      121 vtdgalvvvd cvsgvcvqte tvlrqaiaer ikpvlmmnkm drallelqle peelyqtfqr
      181 ivenvnviis tygegesgpm gnimidpvlg tvgfgsglhg waftlkqfae myvakfaakg
      241 daqlspaera kkvedmmkkl wgdryfdpat gkfsksatsp dgkklprtfc qlildpifkv
      301 fdaimnfkke eaakliekld ikldsedkdk egkpllkavm rrwlpagdal lqmitihlps
      361 pvtaqkyrce llyegppdde aaigikncdp kgplmmyisk mvptsdkgrf yafgrvfsgl
      421 vstglkvrim gpnytpgkke dlylkpiqrt ilmmgryvep iedvpcgniv glvgvdqflv
      481 ktgtittfeh ahnmrvmkfs vspvvrvave aknpadlpkl veglkrlaks dpmvqciiee
      541 sgehiiagag elhleiclkd leedhacipi kksdpvvsyr etvseesnvm clskspnkhn
      601 rlymkarpfp dglaedidkg evsarqelkq rarylaekye wdvtearkiw cfgpdgtgpn
      661 iltditkgvq ylneikdsvv agfqwatkeg vlceenmrav rfdvhdvtlh adaihrgggq
      721 iiptarrcly acvltaqprl mepiylveiq cpeqvvggiy gvlnrkrghv feetqvagtp
      781 mfvvkaylpv nesfgftadl rsntggqafp qcvfdhwqil pgdpfdsasr pcqvvaetrk
      841 rkglkegipa ldnfldkl
//
LOCUS       XP_041321778             456 aa            linear   VRT 06-MAY-2021
DEFINITION  death-associated protein kinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321778
VERSION     XP_041321778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465844.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="death-associated protein kinase 3"
                     /calculated_mol_wt=53109
     Region          7..275
                     /region_name="STKc_DAPK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Death-Associated Protein Kinase; cd14105"
                     /db_xref="CDD:271007"
     Site            order(19..23,25,27,40,42,77,93..94,96,100,102,139,141,
                     143..144,146,160..161,164,179..182)
                     /site_type="active"
                     /db_xref="CDD:271007"
     Site            order(19..23,25,27,40,42,77,93..94,96,100,143..144,146,
                     160..161)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271007"
     Site            order(23,100,102,139,141,143,164,179..182)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271007"
     Site            160..182
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271007"
     CDS             1..456
                     /gene="DAPK3"
                     /coded_by="XM_041465844.1:391..1761"
                     /db_xref="GeneID:121352679"
ORIGIN      
        1 mstfrqesve dfyemgeelg sgqfaivrkc rerktgleya akfikkrrls ssrrgvsree
       61 ierevdilre iqhpniitlh difenktdvv lilelvsgge lfdflaekes lteeeatqfl
      121 kqildgvhyl hskriahfdl kpenimlldk nvpnprikli dfgiahkiea gnefknifgt
      181 pefvapeivn yeplgleadm wsigvityil lsgaspflge tkqetltnis avnydfdeey
      241 fsntselakd firrllvkdp kkrmtiaqsl ehpwikvikr rnvrnedsck kperrrlktt
      301 rlkeytiksh ssmppnntyi nferfskvme evaaaeeslr elernkksfq edieallsiy
      361 eekeswykee nesisqdlrq irqelqktea lkkqaqeetk svvqaanglk rryrklenhy
      421 ealakqvase mkfvqelvws iereklqsse gdgsir
//
LOCUS       XP_041321779             199 aa            linear   VRT 06-MAY-2021
DEFINITION  nicotinamide riboside kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321779
VERSION     XP_041321779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..199
                     /product="nicotinamide riboside kinase 2"
                     /calculated_mol_wt=22797
     Region          4..169
                     /region_name="NRK1"
                     /note="Nicotinamide riboside kinase (NRK) is an enzyme
                     involved in the metabolism of nicotinamide adenine
                     dinucleotide (NAD+). This enzyme catalyzes the
                     phosphorylation of nicotinamide riboside (NR) to form
                     nicotinamide mononucleotide (NMN). It defines the NR...;
                     cd02024"
                     /db_xref="CDD:238982"
     Site            order(9,14..17)
                     /site_type="active"
                     /db_xref="CDD:238982"
     CDS             1..199
                     /gene="NMRK2"
                     /coded_by="XM_041465845.1:153..752"
                     /db_xref="GeneID:121352680"
ORIGIN      
        1 mkyiigiggv tnggkttltn rlvkalpncc vvhqddffkp qdqievgedg fkqwdvldsl
       61 dmeamvstvr awienpvkfa rshgvnvtpg sreptsqdih vlviegflly nykplielfd
      121 lryylavpyq eckrrrstrn ytvpdppglf dghvwpmylk hrkemedsgv dvvyldglks
      181 rddlynqvfe dihnkllnc
//
LOCUS       XP_041321780             340 aa            linear   VRT 06-MAY-2021
DEFINITION  single-stranded DNA-binding protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321780
VERSION     XP_041321780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465846.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="single-stranded DNA-binding protein 4"
                     /calculated_mol_wt=34900
     Region          110..324
                     /region_name="SSDP"
                     /note="Single-stranded DNA binding protein, SSDP;
                     pfam04503"
                     /db_xref="CDD:461334"
     CDS             1..340
                     /gene="SSBP4"
                     /coded_by="XM_041465846.1:1..1023"
                     /db_xref="GeneID:121352681"
ORIGIN      
        1 mippvrairq glggglrpgr asgsvgwgch rgggrsltls lspscpprla lyvyeyllhv
       61 gaqksaqtfl seirweknit lgeppgflhs wwcvfwdlyc aapdrretce hsseakafhd
      121 ysaaaapspv mgnlppgdgm gggpvppaff qppvgvpgsq pllpnamdpa arsqghpgmg
      181 gpmqrmnppr gmagmgpqsy gsgmrpppss lagpgmptmn mgpggrgpwp npnansiays
      241 ssspgnyvgp pggggppgtp ilpspgdstn ssenmytmmn pigpagsrps fpmgpgaegp
      301 mggmsameph hmngslgsgd mdglpkvswg pwdphgagth
//
LOCUS       XP_041321782             503 aa            linear   VRT 06-MAY-2021
DEFINITION  probable ATP-dependent RNA helicase DDX49 [Pyrgilauda ruficollis].
ACCESSION   XP_041321782
VERSION     XP_041321782.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465848.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="probable ATP-dependent RNA helicase DDX49"
                     /calculated_mol_wt=56815
     Region          1..461
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..503
                     /gene="DDX49"
                     /coded_by="XM_041465848.1:26..1537"
                     /db_xref="GeneID:121352682"
ORIGIN      
        1 maefralgla pwlaeqarqv gllrptpvqa acipavlqge rsggerrsrf pshrrerplv
       61 gefggalgnw gepwgggrss gefggalgsp gqpshppcre layqiaeqfr vlgkplglkd
      121 cvvvggldmv aqalelsrrp hvvvatpgrl adhlrsngst aslrrvrflv ldeadrlleq
      181 gtadfsadle lilgavparr qtllfsatlt atlsqlrala anspffweat spvrtveqle
      241 qryllvpeal kdaylvhlvq sfqdqhedwa iiiftktckd cqvlnmmlrr fsfpsvalhs
      301 mmkqkqrfaa lakfkssifk iliatdvaar gldipavqvv inhntpglpk iyihrvgrta
      361 ragrnglait lvtqydihlv haieeeiklq lkefsveeql vldiltqvnv trreceiele
      421 gmdfdekkei nkrkqmileg kdpelearrr aelarirgrn recreklqqg lqrrrqlqlr
      481 rklhkrmerr krkmekekee eeq
//
LOCUS       XP_041321783            1194 aa            linear   VRT 06-MAY-2021
DEFINITION  SURP and G-patch domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321783
VERSION     XP_041321783.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465849.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1194
                     /product="SURP and G-patch domain-containing protein 2"
                     /calculated_mol_wt=130814
     Region          708..>868
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          890..940
                     /region_name="Surp"
                     /note="Surp module; pfam01805"
                     /db_xref="CDD:460339"
     CDS             1..1194
                     /gene="SUGP2"
                     /coded_by="XM_041465849.1:29..3613"
                     /db_xref="GeneID:121352683"
ORIGIN      
        1 masrritret feavvqdkvk ryrsgaagdp ihhfpahsrp lprprynesf hhdgrfphan
       61 cqhqdwseep gedypgenyp gedypgenyp gedypgenyp gedypgenyp genypgpsyr
      121 aaspllrken yfhgqfsrpa prerefgrdy gkfgraaaps reyghhaapq greygqqhre
      181 ygqqrdrdyg qqqdygpsds weaggqqgag fgssevlgdf rspglmeeey ggvedqeyea
      241 adsefrpplr rggvgrgrvl rgkrltrgvv kpkvfkgdik splkkwgvkk pqpgmdpkal
      301 dqplevadra eqrpvplqqh pklpphplaa qrailrlpkp ahvfrnlsfd lvdksdifst
      361 fgieiikwag fhaikndaef srlfgalfel etetcakmla sfkcslrpeh rdycfftiks
      421 lqhaalktpk vdneflnmll dkgavktknc ffeiikpfdk yimrlqdrll kgvtpllmac
      481 nayelslktn gfgnpreman afettvslcr kslallgqtf alasvfrqek ileavglqem
      541 apaptsfpnf ddstlfgrey ienlkawlek sgypiqmkra eaggteqlkt aspdpkapqr
      601 adrkvldtie qlvssivagt lsakdrnaqk nspeywflcd eesleykyyr lrlsevqrss
      661 lageaaapes lramlyarrv asikrrlfkh kkkpvlvpar arrvrrastg tqtllsagtv
      721 lkqpdknppg akaglaqpgl gatssapqga tssapqgasc apqgattsal qgatssapqg
      781 atcapqgatc tpqdatssal qgatssalqg atssalqgat psalqgatss apggascapq
      841 gascapqgas ccqvpgaaeg kadpealaaa pellpglgsq fadvdaktme taeklarfva
      901 qvgpeieqfs idnsadnpdl wflqdqtspa fkfyrmkvme lcpsitfspe aaeaaraagt
      961 tldmeedeee eeeeeeeeee eeeaefepsq pdeedeedee dvaagrrvtk leedlvsrag
     1021 eemsggevql sspsdgavpn lstqapgpgp garfprkrvs skslrvglip apkricliqe
     1081 pkgvstkslr vglipapkri gliqqpkvql rvpeggpdpn pqricliqes kvhepvriay
     1141 drprgcpvtk kkkkpravev pqkrlsprnl qsfkrgnsfk nallkrgnsf kkfl
//
LOCUS       XP_041321784             200 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 161A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321784
VERSION     XP_041321784.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465850.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="transmembrane protein 161A-like"
                     /calculated_mol_wt=22354
     Region          2..>199
                     /region_name="Tmemb_161AB"
                     /note="Predicted transmembrane protein 161AB; pfam10268"
                     /db_xref="CDD:463037"
     CDS             1..200
                     /gene="LOC121352684"
                     /coded_by="XM_041465850.1:42..644"
                     /db_xref="GeneID:121352684"
ORIGIN      
        1 mavmgvqvvv tllaaslmhr maphcsfarw llcngslyry khpsdeelca lagkqrpksr
       61 rdrrasgvae dkplsvprdi elqldtspit avdalvlryf peyqwfvdfs vyagavyvfs
      121 egyfslasag retnlgvlws lltvlfsvkv fftvmrhyfr seeggersvc lsaaffflll
      181 amlalvvree ylefgleagg
//
LOCUS       XP_041321785             491 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase PIAS4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321785
VERSION     XP_041321785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="E3 SUMO-protein ligase PIAS4"
                     /calculated_mol_wt=54476
     Region          12..46
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          133..276
                     /region_name="PINIT"
                     /note="PINIT domain; pfam14324"
                     /db_xref="CDD:464136"
     Region          317..374
                     /region_name="SP-RING_PIAS4"
                     /note="SP-RING finger found in protein inhibitor of
                     activated STAT protein 4 (PIAS4) and similar proteins;
                     cd16821"
                     /db_xref="CDD:438470"
     CDS             1..491
                     /gene="PIAS4"
                     /coded_by="XM_041465851.1:45..1520"
                     /db_xref="GeneID:121352685"
ORIGIN      
        1 maaelveakn mvmsfrvsdl qmllgfvgrs ksglkhelvt ralqlvqfdc spevfkkike
       61 lyetrynkkg sevapapara eglalhsssy ergsavprtl paasidypal ygkylnglgr
      121 lppkvakpev rlvklpfytt ldellkptel vpqnneklqe spcifaltpr qvelirnsre
      181 lqpgvksvqv vlricytdts spqedqyppn iavkvnhsyc svpgyypsnk pgvepkrpcr
      241 pinlthlmyl saatnritvt wgnygksysv glylvrqmts aellqrlkti gikhpelcka
      301 lvkeklrldp dseiattgvr vslicplvkm rlsvpcraet cahlqcfdav fylqmnekkp
      361 twmcpvcdkp apydqliidg llskiltece dadeieylvd gswcpiraek erscspqcpi
      421 lvlgssevng llatpngtge ngkapadvvd ltldssssee deeedeeedd ddegpqpkrr
      481 csyekglvsa c
//
LOCUS       XP_041321786             605 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol-3-phosphate synthase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321786
VERSION     XP_041321786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..605
                     /product="inositol-3-phosphate synthase 1"
                     /calculated_mol_wt=65965
     Region          3..488
                     /region_name="NAD_binding_5"
                     /note="Myo-inositol-1-phosphate synthase; cl00554"
                     /db_xref="CDD:469819"
     CDS             1..605
                     /gene="ISYNA1"
                     /coded_by="XM_041465852.1:345..2162"
                     /db_xref="GeneID:121352686"
ORIGIN      
        1 maepflvesp nvtyskdfie akytystvhv ckengvtkvr pcstrftfrt grqvprlgvm
       61 lvgwggnngt tvtaavlanr lglswmtktg rktanyygsl lqastvclgt gpsgdvyvpf
      121 rdllpmvhpn divfdgwdis slnlaeamrr aevlewplqe qlwphmekmk prasiyipef
      181 iaanqeerad nvlrgsmaeq veqirrdird fkessgvdkv ivlwtanter fcdivpglnd
      241 tadnllraie rglevspstl favasilegc ayingspqnt fvpgavelaa qrrvfiggdd
      301 fksgqtklks vlvdflvgag lktksivsyn hlgnndgknl sapqqfrske isksnvvddt
      361 vqanpvlygp qdkpdhcvvi kyvpyvgdsk raldeytsei mmggtntivi hntcedslla
      421 spiildlail telcqritfc teadpefqgf hsvlsilafl ckaplvpegt pvvnalfrqr
      481 scienilryp gdpvlvatkc hhagarggtr rlagwsqcgi lrvpggpsah rggvqiqgvl
      541 epkawwvgps vtsgfqsvlv mvpvprdaqe qgpskdgspf pshgvpkgdw gvpahrpwhp
      601 vgpsa
//
LOCUS       XP_041321787             362 aa            linear   VRT 06-MAY-2021
DEFINITION  caytaxin [Pyrgilauda ruficollis].
ACCESSION   XP_041321787
VERSION     XP_041321787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="caytaxin"
                     /calculated_mol_wt=41003
     Region          61..189
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          191..328
                     /region_name="CRAL_TRIO_2"
                     /note="Divergent CRAL/TRIO domain; pfam13716"
                     /db_xref="CDD:463965"
     CDS             1..362
                     /gene="ATCAY"
                     /coded_by="XM_041465853.1:243..1331"
                     /db_xref="GeneID:121352687"
ORIGIN      
        1 mgtteatlrm envdvkeewq dedfprplpe etgmeslgsp tedettsspp ntlnfngahr
       61 krktlvapei nisldqsegs ilsddfldtp ddldinvddi etpdetdsle flgngnelew
      121 eddtpvatak nmpgdsadlf gdggtedgsa tngrlwrtvi igeqehridl qmikpymrvv
      181 thggyygegl naiivfaacy lpdsnladyh yimenlflyv isslellvae dymivylnga
      241 tprrrmpglg wlkkcyqmid rrlrknlkal iivhpswfir tvlaisrpfi svkfinkiqy
      301 vhsleeleql ipmehvqipd cvlqyeeeri karkeraeek qdmaegesrp vppaedqets
      361 ms
//
LOCUS       XP_041321789             344 aa            linear   VRT 06-MAY-2021
DEFINITION  ceramide synthase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321789
VERSION     XP_041321789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="ceramide synthase 1"
                     /calculated_mol_wt=39501
     Region          83..288
                     /region_name="TRAM_LAG1_CLN8"
                     /note="TLC domain; pfam03798"
                     /db_xref="CDD:461055"
     CDS             1..344
                     /gene="CERS1"
                     /coded_by="XM_041465855.1:13..1047"
                     /db_xref="GeneID:121352690"
ORIGIN      
        1 mpgygellrr gygslaaaar scgdcgwela lrtwaenahl gwaevllcgl calgwtalrr
       61 acsrrlfrpf gewcklqpkd aakmpesawk llfyslswsy gayllfctdy pffhdppsvf
      121 ygwqrgmevp gdiavayllq gsfyghslya taymdtwrkd slvmllhhlv tltllassya
      181 fryhnvgvlv lflhdvndvq leftklnvyf khrggvyhrl ndvvsnigcl afsvswfwfr
      241 lywfplkvly atchsslqsv pnipfyfffn alllvltlmn iywflyivlf vakvllgqmq
      301 evndvreydv eesrkpgkea giqlpqalke glhlknglvk dkrl
//
LOCUS       XP_041321790             310 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: coatomer subunit epsilon [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321790
VERSION     XP_041321790.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465856.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="LOW QUALITY PROTEIN: coatomer subunit epsilon"
                     /calculated_mol_wt=33916
     Region          11..307
                     /region_name="Coatomer_E"
                     /note="Coatomer epsilon subunit; pfam04733"
                     /db_xref="CDD:398419"
     CDS             1..310
                     /gene="COPE"
                     /coded_by="XM_041465856.1:42..974"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:121352691"
ORIGIN      
        1 magaapagea delfdlrnnf yigayqaain eaqrakpssp qkeaerdvfl frayiaqrkf
       61 gvvldelqgs pspelqavrm faqflasdsq rxgcpgpfgv pqflhcqelw gagafniqgs
      121 lpdhprcpxa lcrcswagnp avslfscpcs lammiqillk ldrldlarke lkkmqeqded
      181 atltqlataw vnlasggekl qdafytfqel adrycpslll lngqaaaama qgrwdeaegl
      241 lqealdkdsg hpetllnlvv lsqhlgkape vtnrylsqlk dahknhpfik eyqakendfd
      301 rlalqyapsa
//
LOCUS       XP_041321791             372 aa            linear   VRT 06-MAY-2021
DEFINITION  growth/differentiation factor 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041321791
VERSION     XP_041321791.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465857.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="growth/differentiation factor 15"
                     /calculated_mol_wt=41773
     Region          37..226
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Region          273..372
                     /region_name="TGF_beta_GDF15"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in mammalian growth/differentiation factor 15
                     (GDF-15) and similar proteins; cd19376"
                     /db_xref="CDD:381646"
     Site            order(280,282,286..287,289,301..305,333..339,342,362..364,
                     372)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381646"
     CDS             1..372
                     /gene="GDF15"
                     /coded_by="XM_041465857.1:1..1119"
                     /db_xref="GeneID:121352692"
ORIGIN      
        1 mpraamrgaa lsclqlllll savdsrphtw dqdrfqleav kkeilerlgm pappvirrql
       61 dqesiqraqr lyqrkvaela gnrsreeeee eeeavsrsrr lhrltptllr wldipeghed
      121 sqghrdpqgh replgpyryh lllsrtadfh rqlrvvrael kllkqplspp gasvpprvti
      181 ytlqgaegtp qllhsqelhw dsrsldltga iqpwvagpeg tlrleldfnt disaalatsg
      241 getllleves lekapravrr argleeecgk sdgkcclksl kvsfqdigws dwviapnsyy
      301 mrfcegscph nykpasmhaq iksrvhslsk aapppccvpa gydpmvlmhl dsegrlvssl
      361 fedmlvtrch ca
//
LOCUS       XP_041321793             614 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 161A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321793
VERSION     XP_041321793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..614
                     /product="transmembrane protein 161A isoform X1"
                     /calculated_mol_wt=66431
     Region          <6..140
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          138..611
                     /region_name="Tmemb_161AB"
                     /note="Predicted transmembrane protein 161AB; pfam10268"
                     /db_xref="CDD:463037"
     CDS             1..614
                     /gene="TMEM161A"
                     /coded_by="XM_041465859.1:21..1865"
                     /db_xref="GeneID:121352693"
ORIGIN      
        1 mdrgwtgsse rgvhgqaarg sqgsarpggp gvtvargpcp aggprgslqc ppasrrvpar
       61 wlhtgvsqrv sprgvpsrdr aghspaagsa glspgvpspg dprgvpsrdr aghspaagsa
      121 glspgvpspg dprlspqavm gvqvvvtlla aslmhrmaph csfarwllcn gslyrykhps
      181 deelcalagk qrpksrrdrr asgvaedkpl svprdielql dtspitavda lvlryfpeyq
      241 wfvdfsvyag avyvfsegyf slasagretn lgvlwslltv lfsvkvfftv mrhyfrseeg
      301 gersvclsaa ffflllamla lvvreeylef gleaglagvs snlepilkpr gwewtlplar
      361 lafrlglaal csflgacltf pglrlaqthl dalsmaagkp ltqvllhvgf vapvlvvllw
      421 vrplsrdfll qaplgketvq ilsdssfdtl rlwavvalsl lrllgtrhhl qaylglaerw
      481 vrrmrrqagr ipareiqqqi triycyvsvv slqylgpvil tlhcalllkt lghhswglyp
      541 espavspaap valprpegdg dvqvvvqeis gvlgciftpp ffrglfsflt wwvaacqvvt
      601 slfglyfhqy laas
//
LOCUS       XP_041321794             566 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 161A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321794
VERSION     XP_041321794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465860.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..566
                     /product="transmembrane protein 161A isoform X2"
                     /calculated_mol_wt=61439
     Region          <6..140
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          138..563
                     /region_name="Tmemb_161AB"
                     /note="Predicted transmembrane protein 161AB; pfam10268"
                     /db_xref="CDD:463037"
     CDS             1..566
                     /gene="TMEM161A"
                     /coded_by="XM_041465860.1:16..1716"
                     /db_xref="GeneID:121352693"
ORIGIN      
        1 mdrgwtgsse rgvhgqaarg sqgsarpggp gvtvargpcp aggprgslqc ppasrrvpar
       61 wlhtgvsqrv sprgvpsrdr aghspaagsa glspgvpspg dprgvpsrdr aghspaagsa
      121 glspgvpspg dprlspqavm gvqvvvtlla aslmhrmaph csfarwllcn gslyrykhps
      181 deelcalagk qrpksrrdrr asgvaedkpl svprdielql dtspitavda lvlryfpeyq
      241 wfvdfsvyag avyvfsegyf slasagretn lgvlwslltv lfsvkvfftv mrhyfrseeg
      301 gersvclsaa ffflllamla lvvreeylef gleaglagvs snlepilkpr gwewtvllhv
      361 gfvapvlvvl lwvrplsrdf llqaplgket vqilsdssfd tlrlwavval sllrllgtrh
      421 hlqaylglae rwvrrmrrqa gripareiqq qitriycyvs vvslqylgpv iltlhcalll
      481 ktlghhswgl ypespavspa apvalprpeg dgdvqvvvqe isgvlgcift ppffrglfsf
      541 ltwwvaacqv vtslfglyfh qylaas
//
LOCUS       XP_041321795             356 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321795
VERSION     XP_041321795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="homer protein homolog 3 isoform X1"
                     /calculated_mol_wt=39467
     Region          6..114
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(27,73,77,92)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <152..>293
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..356
                     /gene="HOMER3"
                     /coded_by="XM_041465861.1:787..1857"
                     /db_xref="GeneID:121352694"
ORIGIN      
        1 mstareqpif strahvfqid patkrnwipa skhaltvsyf ydatrsvyri isvggtkaii
       61 nstitpnmtf tktsqkfgqw adsrantvyg lgfaseqhls qfaekfqevk eaarvarekc
      121 qdkteltnpa lsipshqvlp spiissngpg edklfrsqsa dveisteker lkkmlsegsv
      181 sevqweaeff slqdnnsklv aalheanasv eqwkqqlaay qeetealrhr vaeleaqgth
      241 dsssennkee lsqtleelel lvkakdeeiq mlksqrcrwe aegereetlq klqisclppl
      301 ageaggaghc qefllflflh agcsqplehp rgaeteensg kfslapegns alsqpg
//
LOCUS       XP_041321796             355 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321796
VERSION     XP_041321796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="homer protein homolog 3 isoform X2"
                     /calculated_mol_wt=40136
     Region          6..114
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(27,73,77,92)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <152..>321
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..355
                     /gene="HOMER3"
                     /coded_by="XM_041465862.1:787..1854"
                     /db_xref="GeneID:121352694"
ORIGIN      
        1 mstareqpif strahvfqid patkrnwipa skhaltvsyf ydatrsvyri isvggtkaii
       61 nstitpnmtf tktsqkfgqw adsrantvyg lgfaseqhls qfaekfqevk eaarvarekc
      121 qdkteltnpa lsipshqvlp spiissngpg edklfrsqsa dveisteker lkkmlsegsv
      181 sevqweaeff slqdnnsklv aalheanasv eqwkqqlaay qeetealrhr vaeleaqgth
      241 dsssennkee lsqtleelel lvkakdeeiq mlksqrcrwe aegereetlq klqelearna
      301 eleqrlqlae qslaeslaer drmhhevtkv aeimdvkife lselrqglak lvesn
//
LOCUS       XP_041321797             353 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321797
VERSION     XP_041321797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="homer protein homolog 3 isoform X3"
                     /calculated_mol_wt=39109
     Region          3..111
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(24,70,74,89)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <149..>290
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..353
                     /gene="HOMER3"
                     /coded_by="XM_041465863.1:658..1719"
                     /db_xref="GeneID:121352694"
ORIGIN      
        1 mgeqpifstr ahvfqidpat krnwipaskh altvsyfyda trsvyriisv ggtkaiinst
       61 itpnmtftkt sqkfgqwads rantvyglgf aseqhlsqfa ekfqevkeaa rvarekcqdk
      121 teltnpalsi pshqvlpspi issngpgedk lfrsqsadve istekerlkk mlsegsvsev
      181 qweaeffslq dnnsklvaal heanasveqw kqqlaayqee tealrhrvae leaqgthdss
      241 sennkeelsq tleelellvk akdeeiqmlk sqrcrweaeg ereetlqklq isclpplage
      301 aggaghcqef llflflhagc sqplehprga eteensgkfs lapegnsals qpg
//
LOCUS       XP_041321798             552 aa            linear   VRT 06-MAY-2021
DEFINITION  cytokine receptor-like factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321798
VERSION     XP_041321798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..552
                     /product="cytokine receptor-like factor 1 isoform X1"
                     /calculated_mol_wt=60241
     Region          90..177
                     /region_name="Lep_receptor_Ig"
                     /note="Ig-like C2-type domain; pfam06328"
                     /db_xref="CDD:461878"
     Region          181..276
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          284..386
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(375..376,378..379)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..552
                     /gene="CRLF1"
                     /coded_by="XM_041465864.1:93..1751"
                     /db_xref="GeneID:121352695"
ORIGIN      
        1 melggwrgrw lsappgavpg rgqggswgfg nrgllrlard fpgragalrr pghrrapeqa
       61 mppppllpml plllllcprl pradplsypa vispqdptll igsslvatct vspdfplkae
      121 dlywtlngrr lpaasyaalg pstlsvalar lngsrqqsgd nlvchsrdgg ilagsclyvg
      181 lppekpvnit cwsknmkdlt ckwapgtege tflhtnytlk ykrrwygqdn tcqeyhtagt
      241 yschipkdla lftpyeiwve asnrlgvavs dvvmldildv vttdppsdvh vsrvgdledq
      301 lsvrwssppa lkdflfqaky qiqyrvedss ewkvvddvgn qtscrlaglr pgtvyfvqvr
      361 cnpfsiygsk kagiwsdwsn ptaastprse rvaggcdpkg geqnttlrre lkqffgwvkk
      421 haygcsnlgi klydqwrvwl qkshktrnqf fpaiscsprg terrqdgtgr paptrdrprp
      481 prprrggagr rpgrsaapqp wgtgwgevgg pgwpspggsv gpwpcgsegt pqpcpagggt
      541 eallhqpeqp lg
//
LOCUS       XP_041321799             455 aa            linear   VRT 06-MAY-2021
DEFINITION  cytokine receptor-like factor 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321799
VERSION     XP_041321799.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465865.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="cytokine receptor-like factor 1 isoform X2"
                     /calculated_mol_wt=50279
     Region          90..177
                     /region_name="Lep_receptor_Ig"
                     /note="Ig-like C2-type domain; pfam06328"
                     /db_xref="CDD:461878"
     Region          181..276
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          284..386
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(375..376,378..379)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..455
                     /gene="CRLF1"
                     /coded_by="XM_041465865.1:90..1457"
                     /db_xref="GeneID:121352695"
ORIGIN      
        1 melggwrgrw lsappgavpg rgqggswgfg nrgllrlard fpgragalrr pghrrapeqa
       61 mppppllpml plllllcprl pradplsypa vispqdptll igsslvatct vspdfplkae
      121 dlywtlngrr lpaasyaalg pstlsvalar lngsrqqsgd nlvchsrdgg ilagsclyvg
      181 lppekpvnit cwsknmkdlt ckwapgtege tflhtnytlk ykrrwygqdn tcqeyhtagt
      241 yschipkdla lftpyeiwve asnrlgvavs dvvmldildv vttdppsdvh vsrvgdledq
      301 lsvrwssppa lkdflfqaky qiqyrvedss ewkvvddvgn qtscrlaglr pgtvyfvqvr
      361 cnpfsiygsk kagiwsdwsn ptaastprse rvaggcdpkg geqnttlrre lkqffgwvkk
      421 haygcsnlgi klydqwrvwl qkshktrnqv gssrr
//
LOCUS       XP_041321800             150 aa            linear   VRT 06-MAY-2021
DEFINITION  required for excision 1-B domain-containing protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321800
VERSION     XP_041321800.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465866.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..150
                     /product="required for excision 1-B domain-containing
                     protein"
                     /calculated_mol_wt=17468
     Region          8..98
                     /region_name="DNA_repr_REX1B"
                     /note="DNA repair REX1-B; pfam14966"
                     /db_xref="CDD:434355"
     CDS             1..150
                     /gene="REX1BD"
                     /coded_by="XM_041465866.1:30..482"
                     /db_xref="GeneID:121352696"
ORIGIN      
        1 mtgeavrell qrlrelqser vetyrlfeeg hraylssaph ydfpryrqlv hevtvafsgi
       61 srevldiagr lrdelgrpdl aqhlarlqdr eqeklqltaq lqlarqqaqd qpevdahqqe
      121 vqelkhklik tieaiseilq dlkydseeve
//
LOCUS       XP_041321801             789 aa            linear   VRT 06-MAY-2021
DEFINITION  cartilage oligomeric matrix protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321801
VERSION     XP_041321801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..789
                     /product="cartilage oligomeric matrix protein isoform X1"
                     /calculated_mol_wt=86152
     Region          54..96
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293924"
     Region          54..96
                     /region_name="TSP-5cc"
                     /note="Coiled coil region of thrombospondin-5 (TSP-5);
                     cd16077"
                     /db_xref="CDD:293924"
     Site            order(57..59,61..66,69,71..73,75..77,79..80,82..87,89..91,
                     93..96)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293924"
     Site            order(65,76,79)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293924"
     Region          151..185
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(151,154,168)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          204..241
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(204,207,224)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          296..328
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          329..364
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          365..387
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          447..484
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          447..484
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          485..524
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          525..559
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          525..556
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          578..775
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..789
                     /gene="LOC121352697"
                     /coded_by="XM_041465867.1:167..2536"
                     /db_xref="GeneID:121352697"
ORIGIN      
        1 mvpallllll lacprswcqq rridpsrplp saaarrdpas srgagnaaga ggevgpemlq
       61 emretnrvll evrdllkqqi keitflkntv mecdacgmrp evtgpvitmt qfnrcvpnpc
      121 fpgvpctesg gsfrcgpcpa gysgngthcs dinecnanpc fpkvqcintn pgfrcdpcpp
      181 gftgqllegv glafarankq vctdinecet gaarncvpns icintrgsyk cgackpgfvg
      241 dqisgcrsqt atgarrcpng eispchekae civerdgsls cqclvgwagn gyvcgkdtdi
      301 dgvpdekqrc sdkkcrkdnc vtvpnsgqed adrdgigdac dddadgdgip naedncvytr
      361 nadqrnadkd nfgdacdncr qvknndqrdi dgdgrgdecd ddmdgdgikn tmdncrrvpn
      421 pdqrdgdgdg vgdacdscpt lsnpdqkdtd hdlvgdvcdt nqdsdgdghq dsrdncptvp
      481 nssqvdtdgd glgdecdedd dddgipdfrp pgpdncrlvp npgqedsdgd gvgnlceddf
      541 drdmvidrid vcpenaevtl tdfrafqtvv ldpegdaqid pnwivlnqgm eivqtmnsdp
      601 glavgytafn gvdfegtfhv ntatdddyag fifgyqdsss fyvvmwkqme qtywqanpfr
      661 avaepgiqlk avksktgpge ylrnslwhtg dttdqvkllw kdprnsgwkd ktsyrwflqh
      721 rpqvgyirar fyegpevvad tgvvldttmr ggrlgvfcfs qeniiwsnlr yrcndtiped
      781 yetfrfqqd
//
LOCUS       XP_041321802             762 aa            linear   VRT 06-MAY-2021
DEFINITION  cartilage oligomeric matrix protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321802
VERSION     XP_041321802.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465868.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..762
                     /product="cartilage oligomeric matrix protein isoform X2"
                     /calculated_mol_wt=83593
     Region          27..69
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293924"
     Region          27..69
                     /region_name="TSP-5cc"
                     /note="Coiled coil region of thrombospondin-5 (TSP-5);
                     cd16077"
                     /db_xref="CDD:293924"
     Site            order(30..32,34..39,42,44..46,48..50,52..53,55..60,62..64,
                     66..69)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293924"
     Site            order(38,49,52)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293924"
     Region          124..158
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(124,127,141)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          177..214
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(177,180,197)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          269..301
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          302..337
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          338..360
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          420..457
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          420..457
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          458..497
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          498..532
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          498..529
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          551..748
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..762
                     /gene="LOC121352697"
                     /coded_by="XM_041465868.1:165..2453"
                     /db_xref="GeneID:121352697"
ORIGIN      
        1 mvpallllll lacprswcqq rriggevgpe mlqemretnr vllevrdllk qqikeitflk
       61 ntvmecdacg mrpevtgpvi tmtqfnrcvp npcfpgvpct esggsfrcgp cpagysgngt
      121 hcsdinecna npcfpkvqci ntnpgfrcdp cppgftgqll egvglafara nkqvctdine
      181 cetgaarncv pnsicintrg sykcgackpg fvgdqisgcr sqtatgarrc pngeispche
      241 kaeciverdg slscqclvgw agngyvcgkd tdidgvpdek qrcsdkkcrk dncvtvpnsg
      301 qedadrdgig dacdddadgd gipnaedncv ytrnadqrna dkdnfgdacd ncrqvknndq
      361 rdidgdgrgd ecdddmdgdg ikntmdncrr vpnpdqrdgd gdgvgdacds cptlsnpdqk
      421 dtdhdlvgdv cdtnqdsdgd ghqdsrdncp tvpnssqvdt dgdglgdecd edddddgipd
      481 frppgpdncr lvpnpgqeds dgdgvgnlce ddfdrdmvid ridvcpenae vtltdfrafq
      541 tvvldpegda qidpnwivln qgmeivqtmn sdpglavgyt afngvdfegt fhvntatddd
      601 yagfifgyqd sssfyvvmwk qmeqtywqan pfravaepgi qlkavksktg pgeylrnslw
      661 htgdttdqvk llwkdprnsg wkdktsyrwf lqhrpqvgyi rarfyegpev vadtgvvldt
      721 tmrggrlgvf cfsqeniiws nlryrcndti pedyetfrfq qd
//
LOCUS       XP_041321803             651 aa            linear   VRT 06-MAY-2021
DEFINITION  CREB-regulated transcription coactivator 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321803
VERSION     XP_041321803.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465869.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..651
                     /product="CREB-regulated transcription coactivator 1
                     isoform X1"
                     /calculated_mol_wt=69764
     Region          23..83
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          181..327
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <242..504
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          576..651
                     /region_name="TORC_C"
                     /note="Transducer of regulated CREB activity, C terminus;
                     pfam12886"
                     /db_xref="CDD:463740"
     CDS             1..651
                     /gene="CRTC1"
                     /coded_by="XM_041465869.1:12..1967"
                     /db_xref="GeneID:121352699"
ORIGIN      
        1 mrvapprprg ggcgrgkmaa snnprkfsek ialhnqkqae etaafeevmk dlsltrahrl
       61 qlqktqylql gqsrgqyygg slpnvnqign samdlpfqhn galaeafgav pvsltpfqss
      121 aldtsrttrh hglvdrvyrd rnrlgsphrr plsvdkhgrq vdscpygtvy lsppsdtswr
      181 rtnsdsalhq stmtpaqqes fsggsqdmqq krvllltvpg meettsdadk tlskqgwdtk
      241 ktgssrpksc evpginifps aeqenttali pathntggsl pdltnihfps plptpldpee
      301 ssfpalssss stgnlaanlt hlgistasqg mtttpapsqh rqpsvsplsl gadsrrpqsq
      361 qmsptlspls pitqavamda lsleqqlppy pfftqtssqq qqqpavassl pqtppllqss
      421 glqrgpqlpp lsvtvpstip qsppgnqsqp smgidinsas lqqyrsnags panqsptspv
      481 snqgfspgss pqhssmlgsv fgdsyyeqqm tarqanalsh qleqfnmien aissnslysp
      541 cstlnysqaa mmgltgshgs lqdsqqlnys shgnipniil tvtgesppsl skeltsslag
      601 vgdvsfdtds qfpldelkid pltldglhml ndpdmvltdp atedtfrmdr l
//
LOCUS       XP_041321804             635 aa            linear   VRT 06-MAY-2021
DEFINITION  CREB-regulated transcription coactivator 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321804
VERSION     XP_041321804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..635
                     /product="CREB-regulated transcription coactivator 1
                     isoform X2"
                     /calculated_mol_wt=68229
     Region          23..83
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          165..311
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <226..488
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          560..635
                     /region_name="TORC_C"
                     /note="Transducer of regulated CREB activity, C terminus;
                     pfam12886"
                     /db_xref="CDD:463740"
     CDS             1..635
                     /gene="CRTC1"
                     /coded_by="XM_041465870.1:9..1916"
                     /db_xref="GeneID:121352699"
ORIGIN      
        1 mrvapprprg ggcgrgkmaa snnprkfsek ialhnqkqae etaafeevmk dlsltrahrl
       61 qlqktqylql gqsrgqyygg slpnvnqign samdlpfqtp fqssaldtsr ttrhhglvdr
      121 vyrdrnrlgs phrrplsvdk hgrqvdscpy gtvylsppsd tswrrtnsds alhqstmtpa
      181 qqesfsggsq dmqqkrvlll tvpgmeetts dadktlskqg wdtkktgssr pkscevpgin
      241 ifpsaeqent talipathnt ggslpdltni hfpsplptpl dpeessfpal ssssstgnla
      301 anlthlgist asqgmtttpa psqhrqpsvs plslgadsrr pqsqqmsptl splspitqav
      361 amdalsleqq lppypfftqt ssqqqqqpav asslpqtppl lqssglqrgp qlpplsvtvp
      421 stipqsppgn qsqpsmgidi nsaslqqyrs nagspanqsp tspvsnqgfs pgsspqhssm
      481 lgsvfgdsyy eqqmtarqan alshqleqfn mienaissns lyspcstlny sqaammgltg
      541 shgslqdsqq lnysshgnip niiltvtges ppslskelts slagvgdvsf dtdsqfplde
      601 lkidpltldg lhmlndpdmv ltdpatedtf rmdrl
//
LOCUS       XP_041321805             617 aa            linear   VRT 06-MAY-2021
DEFINITION  CREB-regulated transcription coactivator 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321805
VERSION     XP_041321805.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465871.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..617
                     /product="CREB-regulated transcription coactivator 1
                     isoform X3"
                     /calculated_mol_wt=66347
     Region          23..83
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          181..327
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <325..>453
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          542..617
                     /region_name="TORC_C"
                     /note="Transducer of regulated CREB activity, C terminus;
                     pfam12886"
                     /db_xref="CDD:463740"
     CDS             1..617
                     /gene="CRTC1"
                     /coded_by="XM_041465871.1:10..1863"
                     /db_xref="GeneID:121352699"
ORIGIN      
        1 mrvapprprg ggcgrgkmaa snnprkfsek ialhnqkqae etaafeevmk dlsltrahrl
       61 qlqktqylql gqsrgqyygg slpnvnqign samdlpfqhn galaeafgav pvsltpfqss
      121 aldtsrttrh hglvdrvyrd rnrlgsphrr plsvdkhgrq vdscpygtvy lsppsdtswr
      181 rtnsdsalhq stmtpaqqes fsggsqdmqq krvllltvpg meettsdadk tlskqgwdtk
      241 ktgssrpksc evpginifps aeqenttali pathntggsl pdltnihfps plptpldpee
      301 ssfpalssss stgnlaanlt hlgistasqg mtttpapsqh rqpsvsplsl gadsrrpqsq
      361 qmsptlspls pitqavamda lsleqqlppy pfftqtssqq qqqpavassl pqtppllqss
      421 glqrgpqlpp lsvtvpstip qsppgnqsqp smgidinshs smlgsvfgds yyeqqmtarq
      481 analshqleq fnmienaiss nslyspcstl nysqaammgl tgshgslqds qqlnysshgn
      541 ipniiltvtg esppslskel tsslagvgdv sfdtdsqfpl delkidpltl dglhmlndpd
      601 mvltdpated tfrmdrl
//
LOCUS       XP_041321807             588 aa            linear   VRT 06-MAY-2021
DEFINITION  CREB-regulated transcription coactivator 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321807
VERSION     XP_041321807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..588
                     /product="CREB-regulated transcription coactivator 1
                     isoform X4"
                     /calculated_mol_wt=63121
     Region          23..83
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          181..327
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <325..>453
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          513..588
                     /region_name="TORC_C"
                     /note="Transducer of regulated CREB activity, C terminus;
                     pfam12886"
                     /db_xref="CDD:463740"
     CDS             1..588
                     /gene="CRTC1"
                     /coded_by="XM_041465873.1:11..1777"
                     /db_xref="GeneID:121352699"
ORIGIN      
        1 mrvapprprg ggcgrgkmaa snnprkfsek ialhnqkqae etaafeevmk dlsltrahrl
       61 qlqktqylql gqsrgqyygg slpnvnqign samdlpfqhn galaeafgav pvsltpfqss
      121 aldtsrttrh hglvdrvyrd rnrlgsphrr plsvdkhgrq vdscpygtvy lsppsdtswr
      181 rtnsdsalhq stmtpaqqes fsggsqdmqq krvllltvpg meettsdadk tlskqgwdtk
      241 ktgssrpksc evpginifps aeqenttali pathntggsl pdltnihfps plptpldpee
      301 ssfpalssss stgnlaanlt hlgistasqg mtttpapsqh rqpsvsplsl gadsrrpqsq
      361 qmsptlspls pitqavamda lsleqqlppy pfftqtssqq qqqpavassl pqtppllqss
      421 glqrgpqlpp lsvtvpstip qsppgnqsqp smgidinsle qfnmienais snslyspcst
      481 lnysqaammg ltgshgslqd sqqlnysshg nipniiltvt gesppslske ltsslagvgd
      541 vsfdtdsqfp ldelkidplt ldglhmlndp dmvltdpate dtfrmdrl
//
LOCUS       XP_041321808             533 aa            linear   VRT 06-MAY-2021
DEFINITION  CREB-regulated transcription coactivator 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321808
VERSION     XP_041321808.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465874.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..533
                     /product="CREB-regulated transcription coactivator 1
                     isoform X5"
                     /calculated_mol_wt=57337
     Region          23..83
                     /region_name="TORC_N"
                     /note="Transducer of regulated CREB activity, N terminus;
                     pfam12884"
                     /db_xref="CDD:463738"
     Region          181..327
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <292..490
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..533
                     /gene="CRTC1"
                     /coded_by="XM_041465874.1:13..1614"
                     /db_xref="GeneID:121352699"
ORIGIN      
        1 mrvapprprg ggcgrgkmaa snnprkfsek ialhnqkqae etaafeevmk dlsltrahrl
       61 qlqktqylql gqsrgqyygg slpnvnqign samdlpfqhn galaeafgav pvsltpfqss
      121 aldtsrttrh hglvdrvyrd rnrlgsphrr plsvdkhgrq vdscpygtvy lsppsdtswr
      181 rtnsdsalhq stmtpaqqes fsggsqdmqq krvllltvpg meettsdadk tlskqgwdtk
      241 ktgssrpksc evpginifps aeqenttali pathntggsl pdltnihfps plptpldpee
      301 ssfpalssss stgnlaanlt hlgistasqg mtttpapsqh rqpsvsplsl gadsrrpqsq
      361 qmsptlspls pitqavamda lsleqqlppy pfftqtssqq qqqpavassl pqtppllqss
      421 glqrgpqlpp lsvtvpstip qsppgnqsqp smgidinsas lqqyrsnags panqsptspv
      481 snqgfspgss pqclmllkep qlaalenptw rkevqgilpe hhkslkihfl fhh
//
LOCUS       XP_041321809             615 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 26 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321809
VERSION     XP_041321809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..615
                     /product="kelch-like protein 26 isoform X1"
                     /calculated_mol_wt=68783
     Region          45..165
                     /region_name="BTB_POZ_KLHL26"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 26 (KLHL26); cd18255"
                     /db_xref="CDD:349564"
     Region          65..597
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          160..256
                     /region_name="BACK_KLHL26"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 26 (KLHL26); cd18465"
                     /db_xref="CDD:350540"
     Region          352..399
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          403..446
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          450..495
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          498..545
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          549..590
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..615
                     /gene="KLHL26"
                     /coded_by="XM_041465875.1:620..2467"
                     /db_xref="GeneID:121352700"
ORIGIN      
        1 mcaaglsavp ediwktwkcf vlgegsssma dknstlkctf sapghsttll qglaslraqa
       61 qlldviltin nevfqvhkvv laacsdyfra mftggmreas qdvielkgvs akglkhiidf
      121 aysaevtldl dciqdvlgaa vflqmvpvve lceeflksam svetclnigq mattfslasl
      181 kesvdaftfr hflqiseeed flhlplerlv fflqsnklks cseielfraa vrwlqfdpar
      241 rasasrvlch irfplmksse lvdsvqtldi mvedvlcrqy lleafnyqil pfrqhemqsp
      301 rtairsdvls lvtfggtpyt dndrtvspkv fclpdaggrq frelgemevg sshscvavld
      361 nfvylvggqq lqyrsgegav dvsyrydphl nqwlriqamq esriqfqlnv lrgmvyatgg
      421 rnrsgslasv ekycpkdnew tyvcslkrrt wghagatvgd klyisggygi svedkkalhc
      481 ydpaadqwef ktpmneprvl hamvsangri yalggrmdhv drcfdvlave yyvpetdqwt
      541 tvspmragqs eagccllekk iyivggynwh lnnvtsivqv yntetdewer dlhfpesfag
      601 iacapvilpq vtsqr
//
LOCUS       XP_041321810             595 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 26 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321810
VERSION     XP_041321810.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465876.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..595
                     /product="kelch-like protein 26 isoform X2"
                     /calculated_mol_wt=66724
     Region          25..145
                     /region_name="BTB_POZ_KLHL26"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 26 (KLHL26); cd18255"
                     /db_xref="CDD:349564"
     Region          45..577
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          140..236
                     /region_name="BACK_KLHL26"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 26 (KLHL26); cd18465"
                     /db_xref="CDD:350540"
     Region          332..379
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          383..426
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          430..475
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          478..525
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          529..570
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..595
                     /gene="KLHL26"
                     /coded_by="XM_041465876.1:91..1878"
                     /db_xref="GeneID:121352700"
ORIGIN      
        1 mfsgwlssma dknstlkctf sapghsttll qglaslraqa qlldviltin nevfqvhkvv
       61 laacsdyfra mftggmreas qdvielkgvs akglkhiidf aysaevtldl dciqdvlgaa
      121 vflqmvpvve lceeflksam svetclnigq mattfslasl kesvdaftfr hflqiseeed
      181 flhlplerlv fflqsnklks cseielfraa vrwlqfdpar rasasrvlch irfplmksse
      241 lvdsvqtldi mvedvlcrqy lleafnyqil pfrqhemqsp rtairsdvls lvtfggtpyt
      301 dndrtvspkv fclpdaggrq frelgemevg sshscvavld nfvylvggqq lqyrsgegav
      361 dvsyrydphl nqwlriqamq esriqfqlnv lrgmvyatgg rnrsgslasv ekycpkdnew
      421 tyvcslkrrt wghagatvgd klyisggygi svedkkalhc ydpaadqwef ktpmneprvl
      481 hamvsangri yalggrmdhv drcfdvlave yyvpetdqwt tvspmragqs eagccllekk
      541 iyivggynwh lnnvtsivqv yntetdewer dlhfpesfag iacapvilpq vtsqr
//
LOCUS       XP_041321811             587 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 26 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321811
VERSION     XP_041321811.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465877.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="kelch-like protein 26 isoform X3"
                     /calculated_mol_wt=65828
     Region          17..137
                     /region_name="BTB_POZ_KLHL26"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 26 (KLHL26); cd18255"
                     /db_xref="CDD:349564"
     Region          37..569
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          132..228
                     /region_name="BACK_KLHL26"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 26 (KLHL26); cd18465"
                     /db_xref="CDD:350540"
     Region          324..371
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          375..418
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          422..467
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          470..517
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          521..562
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..587
                     /gene="KLHL26"
                     /coded_by="XM_041465877.1:971..2734"
                     /db_xref="GeneID:121352700"
ORIGIN      
        1 madknstlkc tfsapghstt llqglaslra qaqlldvilt innevfqvhk vvlaacsdyf
       61 ramftggmre asqdvielkg vsakglkhii dfaysaevtl dldciqdvlg aavflqmvpv
      121 velceeflks amsvetclni gqmattfsla slkesvdaft frhflqisee edflhlpler
      181 lvfflqsnkl kscseielfr aavrwlqfdp arrasasrvl chirfplmks selvdsvqtl
      241 dimvedvlcr qylleafnyq ilpfrqhemq sprtairsdv lslvtfggtp ytdndrtvsp
      301 kvfclpdagg rqfrelgeme vgsshscvav ldnfvylvgg qqlqyrsgeg avdvsyrydp
      361 hlnqwlriqa mqesriqfql nvlrgmvyat ggrnrsgsla svekycpkdn ewtyvcslkr
      421 rtwghagatv gdklyisggy gisvedkkal hcydpaadqw efktpmnepr vlhamvsang
      481 riyalggrmd hvdrcfdvla veyyvpetdq wttvspmrag qseagcclle kkiyivggyn
      541 whlnnvtsiv qvyntetdew erdlhfpesf agiacapvil pqvtsqr
//
LOCUS       XP_041321812            1117 aa            linear   VRT 06-MAY-2021
DEFINITION  regulator of nonsense transcripts 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321812
VERSION     XP_041321812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1117
                     /product="regulator of nonsense transcripts 1"
                     /calculated_mol_wt=123309
     Region          120..271
                     /region_name="UPF1_Zn_bind"
                     /note="RNA helicase (UPF2 interacting domain); pfam09416"
                     /db_xref="CDD:401391"
     Region          347..899
                     /region_name="TIGR00376"
                     /note="DNA helicase, putative"
                     /db_xref="CDD:273041"
     Region          469..702
                     /region_name="DEXXQc_UPF1"
                     /note="DEXXQ-box helicase domain of UPF1; cd18039"
                     /db_xref="CDD:350797"
     Site            order(469..471,474,493..499,664,701..702)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350797"
     Site            order(521..523,545..548,599,615,617,668,670)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350797"
     CDS             1..1117
                     /gene="UPF1"
                     /coded_by="XM_041465878.1:58..3411"
                     /db_xref="GeneID:121352701"
ORIGIN      
        1 msveaygpss qtltfldtee aellgadtqg sefeftdftl psqtqtppgp gqagpaqgqg
       61 ppgagqgapg pleaqvngpd gilqngavde nvaktsqlla elnfeedeed tyytkdlpvh
      121 acsycgihdp acvvycntsk kwfcngrgnt sgshivnhlv rakckevtlh kdgplgetvl
      181 ecyncgcrnv fllgfipaka dsvvvllcrq pcasqsslkd inwdssqwqp liqdrcflsw
      241 lvkipseqeq lrarqitaqq inkleelwke npsatledle kpgvdeepqh vllryedayq
      301 yqnifgplvk leadydkklk esqtqdnitv rwdlglnkkr iayftlpktd sdmrlmqgde
      361 iclrykgdla plwkgighvi kvpdnygdei aielrssvga pvevthnfqv dfvwkstsfd
      421 rmqsalktfa vdetsvsgyi yhkllgheve dviikcqlpk rftaqglpdl nhsqvyavkt
      481 vlqrplsliq gppgtgktvt sativyhlar qgngpvlvca psniavdqlt ekihqtglkv
      541 vrlcaksrea idspvsflal hnqirnmdsm pelqklqqlk detgelssad ekryralkrt
      601 aerellmnad vicctcvgag dprlakmqfr silidestqa tepecmvpvv lgakqlilvg
      661 dhcqlgpvvm ckkaakagls qslferlvvl girpirlqvq yrmhpalsaf psnifyegsl
      721 qngvtaadrv kkgfdfqwpq pdkpmffyvt qgqeeiassg tsylnrteaa nvekittkll
      781 kagakpdqig iitpyegqrs ylvqymqfsg slhtklyqev eiasvdafqg rekdfiilsc
      841 vranehqgig flndprrlnv altrarygvi ivgnpkalsk qplwnhllny ykeqkvlveg
      901 plnnlreslm qfskprklvn tinpgarfmt tamydareai ipgsvydrss qgrpsnmyfq
      961 thdqigmisa gpshvtamni pipfnlvmpp mpppgyfgqa ngpaagrgap kgktgrggrq
     1021 knrfgipgts qsnlpnsqas qdvvsqpfsq gpltqgyism sqpsqmsqpg lsqpelsqds
     1081 ylgdefksqi dvalsqdsty qgerayqhgg vtglsqy
//
LOCUS       XP_041321813             343 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 59-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321813
VERSION     XP_041321813.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465879.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="transmembrane protein 59-like isoform X1"
                     /calculated_mol_wt=36471
     Region          62..274
                     /region_name="BSMAP"
                     /note="Brain specific membrane anchored protein;
                     pfam12280"
                     /db_xref="CDD:463519"
     CDS             1..343
                     /gene="TMEM59L"
                     /coded_by="XM_041465879.1:48..1079"
                     /db_xref="GeneID:121352703"
ORIGIN      
        1 maaparrpra llalglalla aaaaatdpfs pqlgdtggcr gqcgrslqrr aaadavlnac
       61 yrgcrlfsic hfvdasaeln ttraeceaac aeaygnaeeq fgcvtgcrkq lpeveesrke
      121 kslelkapsf smldlvstfc ndivssaqsf isstwtfylq addgkvvvfq sqpemeypap
      181 ealeiqpaqp glgsgsspgv pqphtgprak gdkppvkepr gkakahppep pqqehdflgc
      241 mskrgvvgcy rrsglprwil aaclflsimv mlwlscaslv tapeqhvktq plsingdkey
      301 ledldgpgtf plppvitvtl cpahggeaag plplkvdldk til
//
LOCUS       XP_041321814             335 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 59-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321814
VERSION     XP_041321814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..335
                     /product="transmembrane protein 59-like isoform X2"
                     /calculated_mol_wt=35580
     Region          62..266
                     /region_name="BSMAP"
                     /note="Brain specific membrane anchored protein;
                     pfam12280"
                     /db_xref="CDD:463519"
     CDS             1..335
                     /gene="TMEM59L"
                     /coded_by="XM_041465880.1:48..1055"
                     /db_xref="GeneID:121352703"
ORIGIN      
        1 maaparrpra llalglalla aaaaatdpfs pqlgdtggcr gqcgrslqrr aaadavlnac
       61 yrgcrlfsic hfvdasaeln ttraeceaac aeaygnaeeq fgcvtgcrkq lpeveesrke
      121 kslelkapsf smldlvstfc ndivssaqsf isstwtfylq addgkvvvfq sqpemeypap
      181 ealeiqpaqp glgsgsspgv pqphtgprak gdkppvkepr gkakahppep pqqehdflgc
      241 mskrsglprw ilaaclflsi mvmlwlscas lvtapeqhvk tqplsingdk eyledldgpg
      301 tfplppvitv tlcpahggea agplplkvdl dktil
//
LOCUS       XP_041321815             455 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352705 [Pyrgilauda ruficollis].
ACCESSION   XP_041321815
VERSION     XP_041321815.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465881.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="uncharacterized protein LOC121352705"
                     /calculated_mol_wt=47564
     Region          <206..>274
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          246..270
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..455
                     /gene="LOC121352705"
                     /coded_by="XM_041465881.1:558..1925"
                     /db_xref="GeneID:121352705"
ORIGIN      
        1 mmhsghgeat pgwgqppcqg tqpqsplapt rprgpltlgg slccrgggsv cpracppppl
       61 gsrgspghsa sargmlsspk rtgrvwqgsg gaevgvlppc pplrgrlrpg rvtrdsrtrl
      121 flfptpgssg rsagsrcsgr tmgvpaapll lllllllpvs pffivspcfp lllgisdeld
      181 lsnrssgcae ldwgpfrrqr rlllrnngie alspsarlgp rleeldlaen rlrelprgff
      241 snatalrsls legnplpavp paafqptlss lsvscrcdll gtvlapcare gitclcltsh
      301 ghpfnvtefh grecgpgagl aagvaagvvv lvaalvaalv aavryrrrra gaavggvgrg
      361 krdpagnprq pryisrdtgs gsadvtdgpd yenvfvspgt apgaprgwap agqepryspq
      421 vlldedyfle sdpgdqpiya ntvcptediy iipdq
//
LOCUS       XP_041321816             233 aa            linear   VRT 06-MAY-2021
DEFINITION  neurturin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321816
VERSION     XP_041321816.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465882.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="neurturin isoform X1"
                     /calculated_mol_wt=25825
     Region          136..233
                     /region_name="TGF_beta_Neurturin"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in Neurturin and similar proteins; cd19383"
                     /db_xref="CDD:381653"
     Site            order(137,142..146,150..153,158..168,175..178,181,
                     183..184,187,188,196..203,206..207,209..211,213,217..219,
                     221,223..225,227,233)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381653"
     Site            order(137,142,144..146,150..151,163..168,175..181,
                     183..184,189,196,198..203,206,222..225,233)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381653"
     CDS             1..233
                     /gene="NRTN"
                     /coded_by="XM_041465882.1:122..823"
                     /db_xref="GeneID:121352707"
ORIGIN      
        1 mkvwkcaaia smllssmlsi lvcrdmfsgs refsplpssp sssrdssssf ssssssssss
       61 ssslpaaprr spralqrhgs llaqysalle sytegeirql isalveryrq amnsgghelp
      121 lfpragsrrk rararhkpce lrelevsvse lglgyesdet vlfrycsgtc eaavrsydls
      181 lksmrsrrki rkekirarpc crplaydddv sfldaynryy tvnelsakec gcv
//
LOCUS       XP_041321818             233 aa            linear   VRT 06-MAY-2021
DEFINITION  neurturin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321818
VERSION     XP_041321818.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465884.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="neurturin isoform X1"
                     /calculated_mol_wt=25825
     Region          136..233
                     /region_name="TGF_beta_Neurturin"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in Neurturin and similar proteins; cd19383"
                     /db_xref="CDD:381653"
     Site            order(137,142..146,150..153,158..168,175..178,181,
                     183..184,187,188,196..203,206..207,209..211,213,217..219,
                     221,223..225,227,233)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381653"
     Site            order(137,142,144..146,150..151,163..168,175..181,
                     183..184,189,196,198..203,206,222..225,233)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381653"
     CDS             1..233
                     /gene="NRTN"
                     /coded_by="XM_041465884.1:89..790"
                     /db_xref="GeneID:121352707"
ORIGIN      
        1 mkvwkcaaia smllssmlsi lvcrdmfsgs refsplpssp sssrdssssf ssssssssss
       61 ssslpaaprr spralqrhgs llaqysalle sytegeirql isalveryrq amnsgghelp
      121 lfpragsrrk rararhkpce lrelevsvse lglgyesdet vlfrycsgtc eaavrsydls
      181 lksmrsrrki rkekirarpc crplaydddv sfldaynryy tvnelsakec gcv
//
LOCUS       XP_041321819             208 aa            linear   VRT 06-MAY-2021
DEFINITION  neurturin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321819
VERSION     XP_041321819.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465885.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="neurturin isoform X2"
                     /calculated_mol_wt=23073
     Region          111..208
                     /region_name="TGF_beta_Neurturin"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in Neurturin and similar proteins; cd19383"
                     /db_xref="CDD:381653"
     Site            order(112,117..121,125..128,133..143,150..153,156,
                     158..159,162,163,171..178,181..182,184..186,188,192..194,
                     196,198..200,202,208)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381653"
     Site            order(112,117,119..121,125..126,138..143,150..156,
                     158..159,164,171,173..178,181,197..200,208)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381653"
     CDS             1..208
                     /gene="NRTN"
                     /coded_by="XM_041465885.1:307..933"
                     /db_xref="GeneID:121352707"
ORIGIN      
        1 mfsgsrefsp lpsspsssrd ssssfsssss sssssssslp aaprrspral qrhgsllaqy
       61 sallesyteg eirqlisalv eryrqamnsg ghelplfpra gsrrkrarar hkpcelrele
      121 vsvselglgy esdetvlfry csgtceaavr sydlslksmr srrkirkeki rarpccrpla
      181 ydddvsflda ynryytvnel sakecgcv
//
LOCUS       XP_041321820             718 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin gamma-B5-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041321820
VERSION     XP_041321820.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465886.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>718
                     /product="protocadherin gamma-B5-like"
     Region          28..128
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(34..35,91,93,124,126..127)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          137..233
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(143..144,198,200,229,231..232)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          246..338
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(248..249,301,303,334,336..337)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          347..448
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(353..354,411,413,444,446..447)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          480..566
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..718
                     /gene="LOC121352708"
                     /coded_by="XM_041465886.1:<1..>2154"
                     /db_xref="GeneID:121352708"
ORIGIN      
        1 hnplnvfhie vtiqdvndnt prflrdkfql eiseftspga rfylgmaedp dvgsnslqgy
       61 elepngyfiv evkdsqdgsk saelvlrhsl dreseptlrl lltaldggdp prtgtaqlwi
      121 nvtdandnpp vfaqdrylvs lredtppgst vlnvsasdad agtnaqityr fgempatllq
      181 kftvdaqtgt itlqealdfe ntrafslave atdggglvah ckvevevldv ndnppkitil
      241 slsspvpeda pvgtvvalln vndldsgdsg qvscelsgea plsivassgg sykvvtasal
      301 dreqasehrv tvvardrgrp alwsstelvl evsdvndnap vfeeaaysay vaennaagal
      361 vlrvqardad agangrvsyw laggsagaag aaplvsvear sgalyaqrsl dyeqcreftv
      421 avraqdggsp arsstatvrv fvldrndnap rvlwpaaagg gaaaapgeap gaaatpfevv
      481 prsaeagylv akvvavdada grnawlsyel vpasepalfr vglhsgevrt aravserdaa
      541 kqrvvavvkd hgqpalsata tlhvvlaesl qealpelser pagaeaaaaa elqfylvlal
      601 allsallvls valavlarlr ragppavlrc lgaqrfslag aafpadfceg tlpysynlcv
      661 aaparavpea awpppppvpi lsaeellggd scekpssnss afggevsakp dlpqvckt
//
LOCUS       XP_041321821             307 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 14J1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321821
VERSION     XP_041321821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518396.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..307
                     /product="olfactory receptor 14J1-like"
                     /calculated_mol_wt=33457
     Region          32..292
                     /region_name="7tmA_OR14-like"
                     /note="olfactory receptor family 14 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15227"
                     /db_xref="CDD:320355"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320355"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,250,253..254,256..257,260,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320355"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320355"
     Region          137..158
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320355"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320355"
     Region          230..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320355"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320355"
     CDS             1..307
                     /gene="LOC121352709"
                     /coded_by="XM_041465887.1:1..924"
                     /db_xref="GeneID:121352709"
ORIGIN      
        1 msnsssishf lllaladtrq lqllhfclll gislaallgn gliisavacg qhlhtpmfff
       61 llnlalsdlg sicttvpkam hnslwdtrhi sytgcaaqly ltvvfisaey slltimcydr
      121 yvsickalhy gtllgsraca hmaaaawasa flysllhtan tfslplchgn algqffceip
      181 qilklscsks hlrklgplav ssclgfgwfv fivftyvqif ravlripseq grhkafstcl
      241 phlavvslfi stavfaylkp psmsspsldl alsvlysvvp palnpliysl rnqelkaavr
      301 rlmtgcf
//
LOCUS       XP_041321822            1262 aa            linear   VRT 06-MAY-2021
DEFINITION  sal-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321822
VERSION     XP_041321822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465888.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1262
                     /product="sal-like protein 3"
                     /calculated_mol_wt=134184
     Region          <250..669
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          438..520
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          441..462
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          441..461
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(446,452,459,461,468,475)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          469..489
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          469..489
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          707..>769
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          707..728
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          707..727
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(712,714,716,718..719,722..723,726,740,742,746..747,
                     750..751,754,772,774,776,778..779,782..783,786)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Site            order(712,718,725,727,734,741)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          719..744
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          735..755
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          735..755
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          765..787
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          767..787
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1077..>1122
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          1077..1098
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          1077..1097
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1082,1088,1095,1097,1104,1111)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          1105..1125
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1105..1122
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     CDS             1..1262
                     /gene="SALL3"
                     /coded_by="XM_041465888.1:1..3789"
                     /db_xref="GeneID:121352710"
ORIGIN      
        1 msrrkqakpq hlksdeelqa evvsehavpg egaddgdsgn esrsgseetn vcekccaeff
       61 kwtdflehkk sctknplvli vnedepappp aeefpdpspa sspsdqaese aaeegvqaen
      121 ndssevknte keeepmevet saeknfqnqg tsntatplpq ipepssmtsy nmpntnvtle
      181 tllstkvava qfsqsarasa stsissgvta vaipmileql malqqqqihq lqlieqirsq
      241 vammnrqplr pslnqivaaq ggpgqasnql qgfatsaavq ltavipsaiv gqatsgqpta
      301 fdgsqhisrp tsgtstpnis ssgssalpes gvpsssnait sitpvsvsna pnsasqpqna
      361 stppsighgs ltsvsslpnp llpqtssnsv ifpnplvsia atanaldpls almkhrkgkp
      421 pnvsvfepks ssedpffkhk crfcakvfgs dsalqihlrs htgerpfkcn icgnrfstkg
      481 nlkvhfqrhk ekyphiqmnp ypvpeyldnv ptcsgipygm slppekpvtt wldskpvlpt
      541 vptsiglqlp ptipgvnsyg dspsitpmsr spqrpspass ectslspsln tsesgvpasa
      601 espqpiqsgs sltkaepvtl ppmstrlgdl saggqvsaaa tssiptvvtd ssvatslpnp
      661 vlpavsdqfk akfpfgglld smqtsetskl qqlvenidkk mtdpnqcvic hrvlscqsal
      721 kmhyrthtge rpfkckicgr afttkgnlkt hfgvhrakpp lrvqhscpic qkkftnavvl
      781 qqhirmhmgg qipntplpeg fqdamdsels ydeknvdtls nfdddidens meedpelkdt
      841 asdsskplis ysgscpsspp svissiaale nqmkmidsvm ncqqltslks iengsgesdh
      901 lsndsssavg dlesqsagsp amsessssmq alspvnsnse sfrskspgls nqeepqeiql
      961 ktekpdsppp ttenggaldl tstnpgrpvi keeapfsllf lnrergpsqs tpslvtstap
     1021 tmikmevngh skpislgevp slpagiqvpa apqtvmspgi tpmlappprr tpkqhncqsc
     1081 gktfssasal qiherthtge kpfgcticgr afttkgnlkv hmgthmwnna parrgrrlsv
     1141 enpmallggd alkfsemfqk dlaaramnvd pnfwnqyaaa itnglamknn eisviqnggi
     1201 pqlpvslggg aipplsnltg gmdkartgss ppivsldkas setgasrpft rfiednkeig
     1261 in
//
LOCUS       XP_041321823              81 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 3 subunit C-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321823
VERSION     XP_041321823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518493.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>81
                     /product="eukaryotic translation initiation factor 3
                     subunit C-like"
     Region          <1..81
                     /region_name="eIF-3c_N"
                     /note="Eukaryotic translation initiation factor 3 subunit
                     8 N-terminus; pfam05470"
                     /db_xref="CDD:428482"
     CDS             1..81
                     /gene="LOC121352712"
                     /coded_by="XM_041465889.1:21..>263"
                     /db_xref="GeneID:121352712"
ORIGIN      
        1 mvqlgicafr qglikdahna lldiqssgra kellgqglll rslqernaeq ekvekrrqvp
       61 fhmhvnlell ecvylvaaml l
//
LOCUS       XP_041321824            1977 aa            linear   VRT 06-MAY-2021
DEFINITION  myosin-3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321824
VERSION     XP_041321824.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465890.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1977
                     /product="myosin-3-like"
                     /calculated_mol_wt=226886
     Region          27..71
                     /region_name="Myosin_N"
                     /note="Myosin N-terminal SH3-like domain; pfam02736"
                     /db_xref="CDD:460670"
     Region          94..763
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(121..122,173..180,228..229,456..461)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276878"
     Region          843..1920
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1977
                     /gene="LOC121352713"
                     /coded_by="XM_041465890.1:1..5934"
                     /db_xref="GeneID:121352713"
ORIGIN      
        1 meifgeaapy lrksekerie aqnqpfdakt ycfvadpeve ytrgrikaaq dgkitveted
       61 grtvavkpdd vyamnppkfd rvedvamlth lhepavlynl kdrysswmiy tysglfcvtv
      121 npykwlpvyn pevvlayrgk krqeapphif sisdnayqfm ltdrenqsil itgesgagkt
      181 vntkrviqyy atiaasgdta tkkepqlkgt lkdqilsanp lleafgnakt vrndnssrfg
      241 kfirihfgts gklasgdiet ylleksrvtf qlkaersyhi fyqilsnkkp ellemllvta
      301 npydypfisq gqisvasidd qeelvatdaa idtlgfspde rvgiykltga ilhygnmkfk
      361 qkpreeqaep dgteeadkaa ylmglnsadl lkalsyprvk vgneyvlkgq tvdqvhqavn
      421 alaksvyekl flwmvmrinq qldtklprqh figvldiagf eifefnsfeq lcinftnekl
      481 qqffnhhmfv leqeeykkeg iewefidfgm dlaacielie kpmgifsile eecmfpkatd
      541 tsfknklydq hlgkcssfqk pkpgkgkaea hfslvhyagt vdynitgwle knkdplnetv
      601 iglyqkssmk ilchlyasfa sideaegggk kkggkkkgss fqtvsvlfre nlnklmsnlr
      661 tthphfvrci ipnetktpgl mdhklvlhql rcngvlegir icrkgfpnki pygdfkqryh
      721 llnasvipeg kfidsrkace kllssieidh tqykfghtkv ffkagllgvl eemrderlgq
      781 mitrtqalcr gylrrlelkk mfdhresilc iqynirafmk vkqwpwmkly fkfkpllksv
      841 gtekelammk eefertkeel akseatrnkl eekmvalvqe kkdlqlqvqt enenladaee
      901 rcdqliklkf qlearikevm ekleddeemn adlaarkrkl edecselkkd mddleltlvk
      961 aekekhaten kvknlaevvt gldktvaklv kekkalqeaq qqalddlqie eekvntltka
     1021 rikleqqvnh aegslelerk acvdlerakr klegdlklaq etivdlendk qhldeklrkk
     1081 dfdfnqmqnk iaeqrnsgth lqkkirelqa raaeleeetm sekttrtkae krcaelarel
     1141 eetrgsleea ggattaqtel skkreaefqk mrrdleeatl qheataaalr kkhadstael
     1201 geqidnlqrv kqklekekse lkmeiddlag rteavtkska vlekryrtle demsemkarl
     1261 eehqrnvnev vmqkaqlqte sgelsrqlke ketvrlqlsr skqaltqqie elkrqleeei
     1321 kaknalahal qsarhdcdll reqyeeeqea kgelqralsk ansevsqwrt kyetdaiqrt
     1381 eeleeakkkl sqrlqeagqq admlnskcas lekmkfklqg evedlrldie rantsaaald
     1441 rkqqnfdkvm aewkgkyees qlerealske agslntelfk vknayeetld qletikrens
     1501 alqqeaadlt eqitangkmi rdlekakkqa eaeknglqta ledaeaaleh eevkilgvnq
     1561 eltqikseis rkiadkdeei nqlkknheri vetmqgvlda eirsrnealr lkkkmegdln
     1621 emeiqlshan rqaaeaqknl hsiqgalkdt qihlddalrt qddlkeqvam verranllqa
     1681 eveelraale qtersrklae qelldatera qllhtqnssl fntkkkletd maqlqteied
     1741 vtnegksaee rakkamtdaa rmaeelkkeq dtsahlermk knldqtvkdl qlrldeaeqv
     1801 tlkggkkeiq kleakirele aelqeehkks seavknicky errfkeltfq ceeqkknmvr
     1861 lqdlidqlqv kiksyrkqae eageqanadl sklrnalhkm gealeradia esqanklrak
     1921 aregsatkvr lycrcavcss epssrfvpct giiwkgqlwk egafkhklec vwvvkme
//
LOCUS       XP_041321825             262 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SCO1 homolog, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041321825
VERSION     XP_041321825.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465891.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="protein SCO1 homolog, mitochondrial"
                     /calculated_mol_wt=28863
     Region          99..241
                     /region_name="SCO"
                     /note="SCO (an acronym for Synthesis of Cytochrome c
                     Oxidase) family; composed of proteins similar to Sco1, a
                     membrane-anchored protein possessing a soluble domain with
                     a TRX fold. Members of this family are required for the
                     proper assembly of cytochrome c...; cd02968"
                     /db_xref="CDD:239266"
     Site            order(132,136,223)
                     /site_type="other"
                     /note="Cu(I) binding site [ion binding]"
                     /db_xref="CDD:239266"
     CDS             1..262
                     /gene="LOC121352716"
                     /coded_by="XM_041465891.1:1..789"
                     /db_xref="GeneID:121352716"
ORIGIN      
        1 magaaglwrl raspglwplp gpavrgwavl paprsrplsq lppgggprag aqrrlvswrs
       61 laatvvlggg llagmklmkr hkeekleker nrgigkpllg gpfslvsheg qprtskdyig
      121 qwvliyfgft hcpdicpdel ekmiavvdei dripslpnlt plfitidper dnqeaiaryv
      181 kefspklvgl tgskaqidqv akayrvyyse gpkdedndyi vdhtiimyll gpdgdfvdyy
      241 gqnkksaeis ssiaahmrky rs
//
LOCUS       XP_041321826             318 aa            linear   VRT 06-MAY-2021
DEFINITION  manganese-dependent ADP-ribose/CDP-alcohol diphosphatase
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321826
VERSION     XP_041321826.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465892.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="manganese-dependent ADP-ribose/CDP-alcohol
                     diphosphatase"
                     /calculated_mol_wt=35215
     Region          7..306
                     /region_name="MPP_Nbla03831"
                     /note="Homo sapiens Nbla03831 and related proteins,
                     metallophosphatase domain; cd07396"
                     /db_xref="CDD:277341"
     Site            order(14,16,32,63,99..100,225,262,264)
                     /site_type="active"
                     /db_xref="CDD:277341"
     Site            order(14,16,63,99,225,262,264)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277341"
     CDS             1..318
                     /gene="ADPRM"
                     /coded_by="XM_041465892.1:1..957"
                     /db_xref="GeneID:121352717"
ORIGIN      
        1 mqaaprlafg viadiqfada edgydfggcr rryyrhslrl lreavrewag esppidlvlq
       61 lgdsidgqna rrgeaesalq qvlevlgqls vpvhhtwgnh elynfsrarl vhtglysrpa
      121 ggsdgppdre chayhcspap rlrlvvldsy dastlgtdpg slryqeslrl lreknpnedl
      181 nspeglkepy fvafnggfsq aqldwfdgvl kfsdenqekv ivmahvpihp casngvclaw
      241 nyeaalsvih ahrcvvcvla ghlhdgaycl dshgvhhltl eglietppds nafgtvhvye
      301 dkmvlkgrgr ipdrvmqf
//
LOCUS       XP_041321828             159 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 220 [Pyrgilauda ruficollis].
ACCESSION   XP_041321828
VERSION     XP_041321828.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465894.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..159
                     /product="transmembrane protein 220"
                     /calculated_mol_wt=17190
     Region          16..113
                     /region_name="TMEM220"
                     /note="Transmembrane family 220, helix; pfam15071"
                     /db_xref="CDD:434437"
     CDS             1..159
                     /gene="TMEM220"
                     /coded_by="XM_041465894.1:27..506"
                     /db_xref="GeneID:121352718"
ORIGIN      
        1 maarlwrlcn llmaaffgla aavqvndpda glwtvvylvp aaltllvsin psitdngvwr
       61 slcdlhsagc vvgtialacs lfayaqgnif heeegrelfg lviiaiwmsl crssaksplg
      121 garlvaavvv alfpfvswly iyvnkdmres wpthcktvm
//
LOCUS       XP_041321829             899 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321829
VERSION     XP_041321829.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465895.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..899
                     /product="myocardin isoform X1"
                     /calculated_mol_wt=96886
     Region          26..48
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          68..93
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <116..>243
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          335..368
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..899
                     /gene="MYOCD"
                     /coded_by="XM_041465895.1:139..2838"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mpplkspsaf heqrkslera ktedylkhki rsrpersdlv nmhilqdsaa egsiqstqmk
       61 lkrarladdl nekialrpgp lelvekniip vdsavkeaik gtqggfprqs dafafeedss
      121 ndglsperpr srgspgpaep ppgskapepp pagpagapqd rppsadghap dtapgqgsqc
      181 dspkqpagqe sptlpvpsav ksksasdskn rhkkpkdtkp kvkklkyhqy ippdqkaeks
      241 pppmdsayar llqqqqlflq lqilsqqqqq qqqqqhfsyp gmhqgqlkqs neqmvkssnp
      301 sstsgnntpl spvkttfsgq tcvssikpgp lpsnlddlkv selrqqlrir glpvsgtkta
      361 lmerlrpfqe cssstvpsfs eittvtfpvt ptstlssyqs qsstsmlsng fyhfgstsst
      421 ppispassdl svsgslpdtf ndgpmaspqf alqpspvhgs aeeslmssmn ggsiqleleg
      481 idtekdkmlv ekqkvinelt wklqqeqrqv eelrmqlqkr krsngleekq qpaqhffgvp
      541 ikqentvssc pfaskqmalk gqagssdkls ncgvpqvphi vnshclepag qstitsstfl
      601 spqcspqhsp lgaakspqhi slppspnshy llpvspegrs gsppgssclr tapmaaqsgq
      661 kfsisspsfc ksspalsevk qpppyedavk qqmtrsqqmd elldvliesg eipanakedr
      721 sclqkvpqim vspgssggpv pkgsapfepv ssaplpfehc pgssdahlev llnahsplgr
      781 vsemallklg geephfegmm egfsgkaade llnsqeilqt plspmdtqls pspaessalq
      841 msftespwet mewldltpps satgfssltp agpsifnidf ldvadlnlnt smdlhlqqw
//
LOCUS       XP_041321830             898 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321830
VERSION     XP_041321830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..898
                     /product="myocardin isoform X2"
                     /calculated_mol_wt=96758
     Region          26..48
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          68..93
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <116..>243
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          335..368
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..898
                     /gene="MYOCD"
                     /coded_by="XM_041465896.1:139..2835"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mpplkspsaf heqrkslera ktedylkhki rsrpersdlv nmhilqdsaa egsiqstqmk
       61 lkrarladdl nekialrpgp lelvekniip vdsavkeaik gtqggfprqs dafafeedss
      121 ndglsperpr srgspgpaep ppgskapepp pagpagapqd rppsadghap dtapgqgsqc
      181 dspkqpagqe sptlpvpsav ksksasdskn rhkkpkdtkp kvkklkyhqy ippdqkaeks
      241 pppmdsayar llqqqqlflq lqilsqqqqq qqqqqhfsyp gmhqgqlkqs neqmvkssnp
      301 sstsgnntpl spvkttfsgq tcvssikpgp lpsnlddlkv selrqqlrir glpvsgtkta
      361 lmerlrpfqe cssstvpsfs eittvtfpvt ptstlssyqs qsstsmlsng fyhfgstsst
      421 ppispassdl svsgslpdtf ndgpmaspqf alqpspvhgs aeeslmssmn ggsiqleleg
      481 idtekdkmlv ekqkvinelt wklqqeqrqv eelrmqlqkr krsngleekq qpaqhffgvp
      541 ikqentvssc pfaskqmalk gqagssdkls ncgvpqvphi vnshclepag qstitsstfl
      601 spqcspqhsp lgaakspqhi slppspnshy llpvspegrs gsppgssclr tapmaaqsgq
      661 kfsisspsfc ksspalsevk qpppyedavk qmtrsqqmde lldvliesge ipanakedrs
      721 clqkvpqimv spgssggpvp kgsapfepvs saplpfehcp gssdahlevl lnahsplgrv
      781 semallklgg eephfegmme gfsgkaadel lnsqeilqtp lspmdtqlsp spaessalqm
      841 sftespwetm ewldltppss atgfssltpa gpsifnidfl dvadlnlnts mdlhlqqw
//
LOCUS       XP_041321831             930 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321831
VERSION     XP_041321831.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465897.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..930
                     /product="myocardin isoform X3"
                     /calculated_mol_wt=100561
     Region          57..79
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          99..124
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <147..>274
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          366..399
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..930
                     /gene="MYOCD"
                     /coded_by="XM_041465897.1:32..2824"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mfmplvtgci yilqlrlqqr rtreqladqg impplkspsa fheqrksler aktedylkhk
       61 irsrpersdl vnmhilqdsa aegsiqstqm klkrarladd lnekialrpg plelveknii
      121 pvdsavkeai kgtqggfprq sdafafeeds sndglsperp rsrgspgpae pppgskapep
      181 ppagpagapq drppsadgha pdtapgqgsq cdspkqpagq esptlpvpsa vksksasdsk
      241 nrhkkpkdtk pkvkklkyhq yippdqkaek spppmdsaya rllqqqqlfl qlqilsqqqq
      301 qqqqqqhfsy pgmhqgqlkq sneqmvkssn psstsgnntp lspvkttfsg qtcvssikpg
      361 plpsnlddlk vselrqqlri rglpvsgtkt almerlrpfq ecssstvpsf seittvtfpv
      421 tptstlssyq sqsstsmlsn gfyhfgstss tppispassd lsvsgslpdt fndgpmaspq
      481 falqpspvhg saeeslmssm nggsiqlele gidtekdkml vekqkvinel twklqqeqrq
      541 veelrmqlqk rkrsngleek qqpaqhffgv pikqentvss cpfaskqmal kgqagssdkl
      601 sncgvpqvph ivnshclepa gqstitsstf lspqcspqhs plgaakspqh islppspnsh
      661 yllpvspegr sgsppgsscl rtapmaaqsg qkfsisspsf cksspalsev kqpppyedav
      721 kqqmtrsqqm delldvlies geipanaked rsclqkvpqi mvspgssggp vpkgsapfep
      781 vssaplpfeh cpgssdahle vllnahsplg rvsemallkl ggeephfegm megfsgkaad
      841 ellnsqeilq tplspmdtql spspaessal qmsftespwe tmewldltpp ssatgfsslt
      901 pagpsifnid fldvadlnln tsmdlhlqqw
//
LOCUS       XP_041321832             937 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321832
VERSION     XP_041321832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465898.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..937
                     /product="myocardin isoform X4"
                     /calculated_mol_wt=101347
     Region          18..43
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          64..86
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          106..131
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <154..>281
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          373..406
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..937
                     /gene="MYOCD"
                     /coded_by="XM_041465898.1:330..3143"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mtllgsehsl lirskfrsvl qlrlqqrrtr eqladqgimp plkspsafhe qrkslerakt
       61 edylkhkirs rpersdlvnm hilqdsaaeg siqstqmklk rarladdlne kialrpgple
      121 lvekniipvd savkeaikgt qggfprqsda fafeedssnd glsperprsr gspgpaeppp
      181 gskapepppa gpagapqdrp psadghapdt apgqgsqcds pkqpagqesp tlpvpsavks
      241 ksasdsknrh kkpkdtkpkv kklkyhqyip pdqkaekspp pmdsayarll qqqqlflqlq
      301 ilsqqqqqqq qqqhfsypgm hqgqlkqsne qmvkssnpss tsgnntplsp vkttfsgqtc
      361 vssikpgplp snlddlkvse lrqqlrirgl pvsgtktalm erlrpfqecs sstvpsfsei
      421 ttvtfpvtpt stlssyqsqs stsmlsngfy hfgstsstpp ispassdlsv sgslpdtfnd
      481 gpmaspqfal qpspvhgsae eslmssmngg siqlelegid tekdkmlvek qkvineltwk
      541 lqqeqrqvee lrmqlqkrkr sngleekqqp aqhffgvpik qentvsscpf askqmalkgq
      601 agssdklsnc gvpqvphivn shclepagqs titsstflsp qcspqhsplg aakspqhisl
      661 ppspnshyll pvspegrsgs ppgssclrta pmaaqsgqkf sisspsfcks spalsevkqp
      721 ppyedavkqq mtrsqqmdel ldvliesgei panakedrsc lqkvpqimvs pgssggpvpk
      781 gsapfepvss aplpfehcpg ssdahlevll nahsplgrvs emallklgge ephfegmmeg
      841 fsgkaadell nsqeilqtpl spmdtqlsps paessalqms ftespwetme wldltppssa
      901 tgfssltpag psifnidfld vadlnlntsm dlhlqqw
//
LOCUS       XP_041321833             861 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041321833
VERSION     XP_041321833.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465899.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..861
                     /product="myocardin isoform X5"
                     /calculated_mol_wt=92848
     Region          26..48
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          68..93
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <116..>243
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          335..368
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..861
                     /gene="MYOCD"
                     /coded_by="XM_041465899.1:136..2721"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mpplkspsaf heqrkslera ktedylkhki rsrpersdlv nmhilqdsaa egsiqstqmk
       61 lkrarladdl nekialrpgp lelvekniip vdsavkeaik gtqggfprqs dafafeedss
      121 ndglsperpr srgspgpaep ppgskapepp pagpagapqd rppsadghap dtapgqgsqc
      181 dspkqpagqe sptlpvpsav ksksasdskn rhkkpkdtkp kvkklkyhqy ippdqkaeks
      241 pppmdsayar llqqqqlflq lqilsqqqqq qqqqqhfsyp gmhqgqlkqs neqmvkssnp
      301 sstsgnntpl spvkttfsgq tcvssikpgp lpsnlddlkv selrqqlrir glpvsgtkta
      361 lmerlrpfqe cssstvpsfs eittvtfpvt ptstlssyqs qsstsmlsng fyhfgstsst
      421 ppispassdl svsgslpdtf ndgpmaspqf alqpspvhgs aeeslmssmn ggsiqleleg
      481 idtekdkmlv ekqkvinelt wklqqeqrqv eelrmqlqkr krsngleekq qpaqhffgvp
      541 ikqentvssc pfaskqmalk gqagssdkls ncgvpqvphi vnshclepag qstitsstfl
      601 spqcspqhsp lgaakspqhi slppspnshy llpvspegrs gsppgssclr tapqmtrsqq
      661 mdelldvlie sgeipanake drsclqkvpq imvspgssgg pvpkgsapfe pvssaplpfe
      721 hcpgssdahl evllnahspl grvsemallk lggeephfeg mmegfsgkaa dellnsqeil
      781 qtplspmdtq lspspaessa lqmsftespw etmewldltp pssatgfssl tpagpsifni
      841 dfldvadlnl ntsmdlhlqq w
//
LOCUS       XP_041321834             860 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321834
VERSION     XP_041321834.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465900.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..860
                     /product="myocardin isoform X6"
                     /calculated_mol_wt=92720
     Region          26..48
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          68..93
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <116..>243
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          335..368
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..860
                     /gene="MYOCD"
                     /coded_by="XM_041465900.1:137..2719"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mpplkspsaf heqrkslera ktedylkhki rsrpersdlv nmhilqdsaa egsiqstqmk
       61 lkrarladdl nekialrpgp lelvekniip vdsavkeaik gtqggfprqs dafafeedss
      121 ndglsperpr srgspgpaep ppgskapepp pagpagapqd rppsadghap dtapgqgsqc
      181 dspkqpagqe sptlpvpsav ksksasdskn rhkkpkdtkp kvkklkyhqy ippdqkaeks
      241 pppmdsayar llqqqqlflq lqilsqqqqq qqqqqhfsyp gmhqgqlkqs neqmvkssnp
      301 sstsgnntpl spvkttfsgq tcvssikpgp lpsnlddlkv selrqqlrir glpvsgtkta
      361 lmerlrpfqe cssstvpsfs eittvtfpvt ptstlssyqs qsstsmlsng fyhfgstsst
      421 ppispassdl svsgslpdtf ndgpmaspqf alqpspvhgs aeeslmssmn ggsiqleleg
      481 idtekdkmlv ekqkvinelt wklqqeqrqv eelrmqlqkr krsngleekq qpaqhffgvp
      541 ikqentvssc pfaskqmalk gqagssdkls ncgvpqvphi vnshclepag qstitsstfl
      601 spqcspqhsp lgaakspqhi slppspnshy llpvspegrs gsppgssclr tapmtrsqqm
      661 delldvlies geipanaked rsclqkvpqi mvspgssggp vpkgsapfep vssaplpfeh
      721 cpgssdahle vllnahsplg rvsemallkl ggeephfegm megfsgkaad ellnsqeilq
      781 tplspmdtql spspaessal qmsftespwe tmewldltpp ssatgfsslt pagpsifnid
      841 fldvadlnln tsmdlhlqqw
//
LOCUS       XP_041321835             915 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041321835
VERSION     XP_041321835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..915
                     /product="myocardin isoform X7"
                     /calculated_mol_wt=98393
     Region          42..64
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          84..109
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <132..>259
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          351..384
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..915
                     /gene="MYOCD"
                     /coded_by="XM_041465901.1:37..2784"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mapsssrrps psgrtfyssg ssregpvssw qtkaschted ylkhkirsrp ersdlvnmhi
       61 lqdsaaegsi qstqmklkra rladdlneki alrpgplelv ekniipvdsa vkeaikgtqg
      121 gfprqsdafa feedssndgl sperprsrgs pgpaepppgs kapepppagp agapqdrpps
      181 adghapdtap gqgsqcdspk qpagqesptl pvpsavksks asdsknrhkk pkdtkpkvkk
      241 lkyhqyippd qkaekspppm dsayarllqq qqlflqlqil sqqqqqqqqq qhfsypgmhq
      301 gqlkqsneqm vkssnpssts gnntplspvk ttfsgqtcvs sikpgplpsn lddlkvselr
      361 qqlrirglpv sgtktalmer lrpfqecsss tvpsfseitt vtfpvtptst lssyqsqsst
      421 smlsngfyhf gstsstppis passdlsvsg slpdtfndgp maspqfalqp spvhgsaees
      481 lmssmnggsi qlelegidte kdkmlvekqk vineltwklq qeqrqveelr mqlqkrkrsn
      541 gleekqqpaq hffgvpikqe ntvsscpfas kqmalkgqag ssdklsncgv pqvphivnsh
      601 clepagqsti tsstflspqc spqhsplgaa kspqhislpp spnshyllpv spegrsgspp
      661 gssclrtapm aaqsgqkfsi sspsfckssp alsevkqppp yedavkqqmt rsqqmdelld
      721 vliesgeipa nakedrsclq kvpqimvspg ssggpvpkgs apfepvssap lpfehcpgss
      781 dahlevllna hsplgrvsem allklggeep hfegmmegfs gkaadellns qeilqtplsp
      841 mdtqlspspa essalqmsft espwetmewl dltppssatg fssltpagps ifnidfldva
      901 dlnlntsmdl hlqqw
//
LOCUS       XP_041321837             907 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041321837
VERSION     XP_041321837.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465903.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..907
                     /product="myocardin isoform X8"
                     /calculated_mol_wt=97751
     Region          34..56
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          76..101
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <124..>251
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          343..376
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..907
                     /gene="MYOCD"
                     /coded_by="XM_041465903.1:429..3152"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mcksgltwdp alkspsafhe qrkslerakt edylkhkirs rpersdlvnm hilqdsaaeg
       61 siqstqmklk rarladdlne kialrpgple lvekniipvd savkeaikgt qggfprqsda
      121 fafeedssnd glsperprsr gspgpaeppp gskapepppa gpagapqdrp psadghapdt
      181 apgqgsqcds pkqpagqesp tlpvpsavks ksasdsknrh kkpkdtkpkv kklkyhqyip
      241 pdqkaekspp pmdsayarll qqqqlflqlq ilsqqqqqqq qqqhfsypgm hqgqlkqsne
      301 qmvkssnpss tsgnntplsp vkttfsgqtc vssikpgplp snlddlkvse lrqqlrirgl
      361 pvsgtktalm erlrpfqecs sstvpsfsei ttvtfpvtpt stlssyqsqs stsmlsngfy
      421 hfgstsstpp ispassdlsv sgslpdtfnd gpmaspqfal qpspvhgsae eslmssmngg
      481 siqlelegid tekdkmlvek qkvineltwk lqqeqrqvee lrmqlqkrkr sngleekqqp
      541 aqhffgvpik qentvsscpf askqmalkgq agssdklsnc gvpqvphivn shclepagqs
      601 titsstflsp qcspqhsplg aakspqhisl ppspnshyll pvspegrsgs ppgssclrta
      661 pmaaqsgqkf sisspsfcks spalsevkqp ppyedavkqq mtrsqqmdel ldvliesgei
      721 panakedrsc lqkvpqimvs pgssggpvpk gsapfepvss aplpfehcpg ssdahlevll
      781 nahsplgrvs emallklgge ephfegmmeg fsgkaadell nsqeilqtpl spmdtqlsps
      841 paessalqms ftespwetme wldltppssa tgfssltpag psifnidfld vadlnlntsm
      901 dlhlqqw
//
LOCUS       XP_041321838             907 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041321838
VERSION     XP_041321838.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465904.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..907
                     /product="myocardin isoform X8"
                     /calculated_mol_wt=97751
     Region          34..56
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          76..101
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <124..>251
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          343..376
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..907
                     /gene="MYOCD"
                     /coded_by="XM_041465904.1:203..2926"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mcksgltwdp alkspsafhe qrkslerakt edylkhkirs rpersdlvnm hilqdsaaeg
       61 siqstqmklk rarladdlne kialrpgple lvekniipvd savkeaikgt qggfprqsda
      121 fafeedssnd glsperprsr gspgpaeppp gskapepppa gpagapqdrp psadghapdt
      181 apgqgsqcds pkqpagqesp tlpvpsavks ksasdsknrh kkpkdtkpkv kklkyhqyip
      241 pdqkaekspp pmdsayarll qqqqlflqlq ilsqqqqqqq qqqhfsypgm hqgqlkqsne
      301 qmvkssnpss tsgnntplsp vkttfsgqtc vssikpgplp snlddlkvse lrqqlrirgl
      361 pvsgtktalm erlrpfqecs sstvpsfsei ttvtfpvtpt stlssyqsqs stsmlsngfy
      421 hfgstsstpp ispassdlsv sgslpdtfnd gpmaspqfal qpspvhgsae eslmssmngg
      481 siqlelegid tekdkmlvek qkvineltwk lqqeqrqvee lrmqlqkrkr sngleekqqp
      541 aqhffgvpik qentvsscpf askqmalkgq agssdklsnc gvpqvphivn shclepagqs
      601 titsstflsp qcspqhsplg aakspqhisl ppspnshyll pvspegrsgs ppgssclrta
      661 pmaaqsgqkf sisspsfcks spalsevkqp ppyedavkqq mtrsqqmdel ldvliesgei
      721 panakedrsc lqkvpqimvs pgssggpvpk gsapfepvss aplpfehcpg ssdahlevll
      781 nahsplgrvs emallklgge ephfegmmeg fsgkaadell nsqeilqtpl spmdtqlsps
      841 paessalqms ftespwetme wldltppssa tgfssltpag psifnidfld vadlnlntsm
      901 dlhlqqw
//
LOCUS       XP_041321839             899 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041321839
VERSION     XP_041321839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..899
                     /product="myocardin isoform X9"
                     /calculated_mol_wt=97309
     Region          18..43
                     /region_name="RPEL"
                     /note="RPEL repeat; cl29414"
                     /db_xref="CDD:475195"
     Region          64..86
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          106..131
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <154..>281
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          373..406
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..899
                     /gene="MYOCD"
                     /coded_by="XM_041465905.1:330..3029"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mtllgsehsl lirskfrsvl qlrlqqrrtr eqladqgimp plkspsafhe qrkslerakt
       61 edylkhkirs rpersdlvnm hilqdsaaeg siqstqmklk rarladdlne kialrpgple
      121 lvekniipvd savkeaikgt qggfprqsda fafeedssnd glsperprsr gspgpaeppp
      181 gskapepppa gpagapqdrp psadghapdt apgqgsqcds pkqpagqesp tlpvpsavks
      241 ksasdsknrh kkpkdtkpkv kklkyhqyip pdqkaekspp pmdsayarll qqqqlflqlq
      301 ilsqqqqqqq qqqhfsypgm hqgqlkqsne qmvkssnpss tsgnntplsp vkttfsgqtc
      361 vssikpgplp snlddlkvse lrqqlrirgl pvsgtktalm erlrpfqecs sstvpsfsei
      421 ttvtfpvtpt stlssyqsqs stsmlsngfy hfgstsstpp ispassdlsv sgslpdtfnd
      481 gpmaspqfal qpspvhgsae eslmssmngg siqlelegid tekdkmlvek qkvineltwk
      541 lqqeqrqvee lrmqlqkrkr sngleekqqp aqhffgvpik qentvsscpf askqmalkgq
      601 agssdklsnc gvpqvphivn shclepagqs titsstflsp qcspqhsplg aakspqhisl
      661 ppspnshyll pvspegrsgs ppgssclrta pqmtrsqqmd elldvliesg eipanakedr
      721 sclqkvpqim vspgssggpv pkgsapfepv ssaplpfehc pgssdahlev llnahsplgr
      781 vsemallklg geephfegmm egfsgkaade llnsqeilqt plspmdtqls pspaessalq
      841 msftespwet mewldltpps satgfssltp agpsifnidf ldvadlnlnt smdlhlqqw
//
LOCUS       XP_041321840             899 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321840
VERSION     XP_041321840.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465906.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..899
                     /product="myocardin isoform X1"
                     /calculated_mol_wt=96886
     Region          26..48
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          68..93
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <116..>243
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          335..368
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..899
                     /gene="MYOCD"
                     /coded_by="XM_041465906.1:328..3027"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mpplkspsaf heqrkslera ktedylkhki rsrpersdlv nmhilqdsaa egsiqstqmk
       61 lkrarladdl nekialrpgp lelvekniip vdsavkeaik gtqggfprqs dafafeedss
      121 ndglsperpr srgspgpaep ppgskapepp pagpagapqd rppsadghap dtapgqgsqc
      181 dspkqpagqe sptlpvpsav ksksasdskn rhkkpkdtkp kvkklkyhqy ippdqkaeks
      241 pppmdsayar llqqqqlflq lqilsqqqqq qqqqqhfsyp gmhqgqlkqs neqmvkssnp
      301 sstsgnntpl spvkttfsgq tcvssikpgp lpsnlddlkv selrqqlrir glpvsgtkta
      361 lmerlrpfqe cssstvpsfs eittvtfpvt ptstlssyqs qsstsmlsng fyhfgstsst
      421 ppispassdl svsgslpdtf ndgpmaspqf alqpspvhgs aeeslmssmn ggsiqleleg
      481 idtekdkmlv ekqkvinelt wklqqeqrqv eelrmqlqkr krsngleekq qpaqhffgvp
      541 ikqentvssc pfaskqmalk gqagssdkls ncgvpqvphi vnshclepag qstitsstfl
      601 spqcspqhsp lgaakspqhi slppspnshy llpvspegrs gsppgssclr tapmaaqsgq
      661 kfsisspsfc ksspalsevk qpppyedavk qqmtrsqqmd elldvliesg eipanakedr
      721 sclqkvpqim vspgssggpv pkgsapfepv ssaplpfehc pgssdahlev llnahsplgr
      781 vsemallklg geephfegmm egfsgkaade llnsqeilqt plspmdtqls pspaessalq
      841 msftespwet mewldltpps satgfssltp agpsifnidf ldvadlnlnt smdlhlqqw
//
LOCUS       XP_041321841             858 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041321841
VERSION     XP_041321841.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465907.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..858
                     /product="myocardin isoform X10"
                     /calculated_mol_wt=92028
     Region          27..52
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <75..>202
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          294..327
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..858
                     /gene="MYOCD"
                     /coded_by="XM_041465907.1:378..2954"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mhilqdsaae gsiqstqmkl krarladdln ekialrpgpl elvekniipv dsavkeaikg
       61 tqggfprqsd afafeedssn dglsperprs rgspgpaepp pgskapeppp agpagapqdr
      121 ppsadghapd tapgqgsqcd spkqpagqes ptlpvpsavk sksasdsknr hkkpkdtkpk
      181 vkklkyhqyi ppdqkaeksp ppmdsayarl lqqqqlflql qilsqqqqqq qqqqhfsypg
      241 mhqgqlkqsn eqmvkssnps stsgnntpls pvkttfsgqt cvssikpgpl psnlddlkvs
      301 elrqqlrirg lpvsgtktal merlrpfqec ssstvpsfse ittvtfpvtp tstlssyqsq
      361 sstsmlsngf yhfgstsstp pispassdls vsgslpdtfn dgpmaspqfa lqpspvhgsa
      421 eeslmssmng gsiqlelegi dtekdkmlve kqkvineltw klqqeqrqve elrmqlqkrk
      481 rsngleekqq paqhffgvpi kqentvsscp faskqmalkg qagssdklsn cgvpqvphiv
      541 nshclepagq stitsstfls pqcspqhspl gaakspqhis lppspnshyl lpvspegrsg
      601 sppgssclrt apmaaqsgqk fsisspsfck sspalsevkq pppyedavkq qmtrsqqmde
      661 lldvliesge ipanakedrs clqkvpqimv spgssggpvp kgsapfepvs saplpfehcp
      721 gssdahlevl lnahsplgrv semallklgg eephfegmme gfsgkaadel lnsqeilqtp
      781 lspmdtqlsp spaessalqm sftespwetm ewldltppss atgfssltpa gpsifnidfl
      841 dvadlnlnts mdlhlqqw
//
LOCUS       XP_041321842             858 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardin isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041321842
VERSION     XP_041321842.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465908.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..858
                     /product="myocardin isoform X10"
                     /calculated_mol_wt=92028
     Region          27..52
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          <75..>202
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          294..327
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     CDS             1..858
                     /gene="MYOCD"
                     /coded_by="XM_041465908.1:395..2971"
                     /db_xref="GeneID:121352720"
ORIGIN      
        1 mhilqdsaae gsiqstqmkl krarladdln ekialrpgpl elvekniipv dsavkeaikg
       61 tqggfprqsd afafeedssn dglsperprs rgspgpaepp pgskapeppp agpagapqdr
      121 ppsadghapd tapgqgsqcd spkqpagqes ptlpvpsavk sksasdsknr hkkpkdtkpk
      181 vkklkyhqyi ppdqkaeksp ppmdsayarl lqqqqlflql qilsqqqqqq qqqqhfsypg
      241 mhqgqlkqsn eqmvkssnps stsgnntpls pvkttfsgqt cvssikpgpl psnlddlkvs
      301 elrqqlrirg lpvsgtktal merlrpfqec ssstvpsfse ittvtfpvtp tstlssyqsq
      361 sstsmlsngf yhfgstsstp pispassdls vsgslpdtfn dgpmaspqfa lqpspvhgsa
      421 eeslmssmng gsiqlelegi dtekdkmlve kqkvineltw klqqeqrqve elrmqlqkrk
      481 rsngleekqq paqhffgvpi kqentvsscp faskqmalkg qagssdklsn cgvpqvphiv
      541 nshclepagq stitsstfls pqcspqhspl gaakspqhis lppspnshyl lpvspegrsg
      601 sppgssclrt apmaaqsgqk fsisspsfck sspalsevkq pppyedavkq qmtrsqqmde
      661 lldvliesge ipanakedrs clqkvpqimv spgssggpvp kgsapfepvs saplpfehcp
      721 gssdahlevl lnahsplgrv semallklgg eephfegmme gfsgkaadel lnsqeilqtp
      781 lspmdtqlsp spaessalqm sftespwetm ewldltppss atgfssltpa gpsifnidfl
      841 dvadlnlnts mdlhlqqw
//
LOCUS       XP_041321843             392 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity mitogen-activated protein kinase kinase 4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321843
VERSION     XP_041321843.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465909.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="dual specificity mitogen-activated protein
                     kinase kinase 4"
                     /calculated_mol_wt=43615
     Region          88..378
                     /region_name="PKc_MKK4"
                     /note="Catalytic domain of the dual-specificity Protein
                     Kinase, Mitogen-activated protein Kinase Kinase 4;
                     cd06616"
                     /db_xref="CDD:270790"
     Site            order(88..92,114,119,121,139,158,160..162,170)
                     /site_type="other"
                     /note="allosteric peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270790"
     Site            order(101..105,109,122,124,155,171..174,176..177,180,222,
                     224..227,229,239..240,243,256..259,261,292,301)
                     /site_type="active"
                     /db_xref="CDD:270790"
     Site            order(101..105,107,109,122,124,155,171..174,176..177,
                     179..180,224,226..227,229,240)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270790"
     Site            order(104..105,222,224..226,243,256..259,261,292,301)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270790"
     Site            239..261
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270790"
     CDS             1..392
                     /gene="MAP2K4"
                     /coded_by="XM_041465909.1:125..1303"
                     /db_xref="GeneID:121352721"
ORIGIN      
        1 matpspsggs ggsgsgpgpg aagssssssm qgkrkalkln fanppfksta rftlntsgvp
       61 fqnphierlr thsiessgkl kispeqhwdf taedlkdlge igrgaygsvn kmvhkpsgqi
      121 mavkrirstv dekeqkqllm dldvvmrssd cpyivqfyga lfregdcwic melmstsfdk
      181 fykyvysvld dvipeeilgk itlatvkaln hlkenlkiih rdikpsnill drngniklcd
      241 fgisgqlvds iaktrdagcr pymaperidp sasrqgydvr sdvwslgitl yelatgrfpy
      301 pkwnsvfdql tqvvkgdppq lsnseerefs psfinfvnlc ltkdeskrpk ykellkhpfi
      361 lmyeertvdv acyvckildq mpatpsspmy vd
//
LOCUS       XP_041321844             821 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc phosphodiesterase ELAC protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321844
VERSION     XP_041321844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465910.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..821
                     /product="zinc phosphodiesterase ELAC protein 2"
                     /calculated_mol_wt=91226
     Region          42..303
                     /region_name="metallo-hydrolase-like_MBL-fold"
                     /note="mainly hydrolytic enzymes and related proteins
                     which carry out various biological functions; MBL-fold
                     metallohydrolase domain; cl23716"
                     /db_xref="CDD:451500"
     Site            order(94,96,98..99,240..241,272,303)
                     /site_type="active"
                     /db_xref="CDD:293854"
     Region          473..678
                     /region_name="RNaseZ_ELAC1_ELAC2-C-term-like_MBL-fold"
                     /note="Ribonuclease Z ELAC1, C-terminus of ELAC2, and
                     related proteins; MBL-fold metallo-hydrolase domain;
                     cd07718"
                     /db_xref="CDD:293804"
     Site            order(505,535..536,538,540..541,634..635,656,676)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293804"
     CDS             1..821
                     /gene="ELAC2"
                     /coded_by="XM_041465910.1:16..2481"
                     /db_xref="GeneID:121352722"
ORIGIN      
        1 maegpsaarp arrpkdvprh vwarerrrna gtglagpntv yvqvvaagsr dagaavyvfs
       61 efnrylfncg egtqramqeh klkishldsi flsrvswanv gglpgmiltl kaiglqrcvf
      121 lgppklqnyl kairlfpgpl krmdlavqlh tepeykdetm tvyqipltgk plaagssppq
      181 spgasppggn spkgdtgpgs praaqqslee gkespkkagd eqkcarkhpe lvtaflckvh
      241 prkgkflaak aqelglpvgt pailpiital kngesitfeg kelfpeelct ptdpgpvflv
      301 lecphegfvd avcenetfrr yqegvaehqv alvihmtpep vlrdsryqhw mqrfgpgtqh
      361 lvlnenssav hnprsykiqt qlnlihpeif pllttyqske aeavcpvpiv rgecllkyhl
      421 rpqqewqrda vtvcdpdefv tealdlpdfq trvkeckesl salpgnvgay peivflgtgs
      481 aipmkirnvs stllntsatr sllldcgegt fgqlcrhyge qvdqvlcnlv avfvshmhtd
      541 hhsglvnilm errrafaalg qdfsplflva peqimpwlhe yhnhceeilg dikmipsqsl
      601 vkgcenmrpk akefvsslle sydlaefqtc evqhcknafa csvihksgwk vvysgdtmpc
      661 malvqmgkna nlliheatle dgmekeaiek thsttsqaiq tgmkmnaefi mlnhfsqrya
      721 kiplfsedfs drvgiafdhm rvrfgdfpai pklipplkal faddivemee rkekremrll
      781 ketalvldkl trgdsteaac qkrkqaknhq elpdkklkta n
//
LOCUS       XP_041321845            1472 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: myosin heavy chain, skeletal muscle,
            adult-like [Pyrgilauda ruficollis].
ACCESSION   XP_041321845
VERSION     XP_041321845.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465911.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1472
                     /product="LOW QUALITY PROTEIN: myosin heavy chain,
                     skeletal muscle, adult-like"
                     /calculated_mol_wt=168203
     Region          34..78
                     /region_name="Myosin_N"
                     /note="Myosin N-terminal SH3-like domain; pfam02736"
                     /db_xref="CDD:460670"
     Region          101..777
                     /region_name="MYSc_class_II"
                     /note="class II myosins, motor domain; cd01377"
                     /db_xref="CDD:276951"
     Site            order(128..136,180..187,237..247,465..470)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276951"
     Site            128..136
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276951"
     Site            180..187
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276951"
     Site            237..247
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276951"
     Site            465..470
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276951"
     Site            494..517
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276951"
     Site            708..717
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276951"
     Site            order(720..736,766..777)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276951"
     Region          857..>1471
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1472
                     /gene="LOC121352723"
                     /coded_by="XM_041465911.1:16..4434"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121352723"
ORIGIN      
        1 masgdaemav fgeaapylrk sekeriaaqn kpfdakssvf vahpkesfvk gtitsresgk
       61 vtvktegget ltvkedqvfs mnppkydkie dmammthlhe pavlynlker yaawmiytys
      121 glfcvtvnpy kwlpvynpev vlayrgkkrq eapphifsis dnayqsmltd renqsilitg
      181 esgagktvnt krviqyfati aasgekkkee hasgkmqgtl edqiisanpl leafgnaktv
      241 rndnssrfgk firihfgatg klasadiety lleksrvtfq lkaersyhif yqimsnkkpe
      301 lidmllittn pydfhfvsqg eitvpsiddq eelmatdsai dilgfsadek taiykltgav
      361 mhygnlkfkq kqreeqaepd gtevadkaay lmglnsadll kalcyprvkv gneyvtkgqt
      421 vqqvnnsvga lakavyekmf lwmvvrineq ldtkqprqyf igvldiagfe ifdynsfeql
      481 cinftneklq qffnhhmfvl eqeeykkegi ewtfidfgmd laacieliek pmgifsilee
      541 ecmfpkatdt sfknklydqh lgksnnfqkp kpakgkaeah fslvhyagtv dynisgwlek
      601 nkdplnetvi glyqkssvkt lallfanygg adagqfygnx agsgkkggkk kgssfqtvsa
      661 lfrenlnklm tnlrsthphf vrciipnetk tpgamehelv lhqlrcngvl egiricrkgf
      721 psrvlyadfk qrykvlnasa ipegqfidsk kasekllgsi dvdhtqykfg htkvffkagl
      781 igileemrde klaqlitrtq arcrgflmrv eyqrmverre sifciqynir afmnvkhwpw
      841 mklffkikpl lksaesekem anmkqefekt keelakseak rkeleekmvk lvqekndlql
      901 qvqaeadsla daeercdqli knkiqleaki kelteraeee eeinaeltak krkledecse
      961 lkkdiddlel tlakvekekh atenkvknlt eemaaldeti akltkekkal qeahqqtldd
     1021 lqaeedkvnt ltkaktkleq qvddlegsle qekklrmdle rakrklegdl klaqdsimdl
     1081 endkqqldek lkkkdfdfnq mqnkiaeqrn sgthlqkkir elqaraaele eetmsekttr
     1141 tkaekrcael areleetrgs leeaggatta qtelskkrea efqkmrrdle eatlqheata
     1201 aalrkkhads taelgeqidn lqrvkqklek ekselkmeid dlasnmesvs kakanlekmc
     1261 rtledqlsei kskeeehqrm indlnaqrar lqtesgeysr qveekdglis qlsrskqaft
     1321 qqieelkrhl eeeikaknal ahalqsarhd cdllreqyee eqeakgelqr alskansevs
     1381 qwrtkyetda iqrteeleea kkklaqrlqd aeeqaagsgg qaeqlsnvnl skfrkiqhel
     1441 eeaeeradia esqvnklrak srefhrriee ee
//
LOCUS       XP_041321846            4349 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: dynein heavy chain 9, axonemal [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321846
VERSION     XP_041321846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465912.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4349
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4349
                     /product="LOW QUALITY PROTEIN: dynein heavy chain 9,
                     axonemal"
                     /calculated_mol_wt=492534
     Region          183..715
                     /region_name="DHC_N1"
                     /note="Dynein heavy chain, N-terminal region 1; pfam08385"
                     /db_xref="CDD:462457"
     Region          1220..1621
                     /region_name="DHC_N2"
                     /note="Dynein heavy chain, N-terminal region 2; pfam08393"
                     /db_xref="CDD:462462"
     Region          1233..4013
                     /region_name="DYN1"
                     /note="Dynein, heavy chain [Cytoskeleton]; COG5245"
                     /db_xref="CDD:227570"
     Region          1760..2086
                     /region_name="AAA_6"
                     /note="Hydrolytic ATP binding site of dynein motor region;
                     pfam12774"
                     /db_xref="CDD:463697"
     Region          2941..3284
                     /region_name="MT"
                     /note="Microtubule-binding stalk of dynein motor;
                     pfam12777"
                     /db_xref="CDD:463699"
     Region          4052..4347
                     /region_name="Dynein_C"
                     /note="Dynein heavy chain C-terminal domain; pfam18199"
                     /db_xref="CDD:465677"
     CDS             1..4349
                     /gene="DNAH9"
                     /coded_by="XM_041465912.1:1..13050"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121352725"
ORIGIN      
        1 meaegdrgva gpdpkefpre fppeeppeep cwarlargaa ralavpperw rrwagpalla
       61 wrspagelgl ragpppppps atkalfflrp paagpgpael lcgdlpaepl phfaalveev
      121 ivpiltnrrn hqgwprvvsq diihhvhslk ntvfkvvgqv kgktllplpa gsegienidp
      181 kneklcadle gihsqltsrr vsnlleller vqsiyvpafq smltdveaal seaqdidlhl
      241 aalqqpleqv eaaefskvkp llapllhavc wlwvscqhys vplrlvvllq eicnlliqqa
      301 mvylspedll kgeveeslgk vqtvfdilta fkgaleerrt nlqvyyepgq qvrswdfhsr
      361 lvfarldsfl qrlqmvkgvl staldlaqle kiefggmkgk algqqvldmh eefqegfqvf
      421 seraydcldl anlefeqdal dfqqkvedid rrlgtvfsqa fsdapglehi fkllamfqnl
      481 lqrpvmaaaa adkvpvllsv fstvldqarl tytrhtqagl qlgfpplhkn vppvagalgw
      541 arelrariqg plehlrhipg lsldsargrr vvqkyeemiq lldryqekly ldwsqtvsek
      601 sqynltqpli rrdpqtklit vnfdpqlvsv lrevsylrgs gagaippaaa elhsckesfw
      661 qlvaslelmg nsynkvlrtv leveyplvqg qlqdidlklr eaeetltwrt egvwdhisgv
      721 mgdvcdleqr vqkakgnvee iqgivhswgs pilerrdskk eavlsleecq erlerryslv
      781 rdcgqrihwl vkenqsllra dpasdawkvy ldyvdeivld gfftaiecsl kyllentdpk
      841 aglaplfevq ldlvipdlvf rpsldpgtnd gfcdmvesll qgiyhisslv prlathsgfc
      901 hyqadleamp alcpwrqell graqaaaaac rehraglerr fshlcgddrr elcrqlllhg
      961 rvptpadvea hgeegvpeap atlqqfreqm gsyeqlyeev armqplctfq gwlrldarpf
     1021 kaallneikr wslvfkqhll dhvthsladl defiqsaekg lsrkvergdy gglvevmghl
     1081 lavkerrsat damfeplkei iellrayeqq lpeevhqqle elpekwsqvk klaqavkqqv
     1141 aplqagevta lrqscaafda qqlrlrerfa aeapfrfdte kpyqlldakh meikqmetam
     1201 tsiyesaglf evmvpeykql kqcrkelcll kelwdmislv ntslddwqtt rwvdinvekm
     1261 dleckkfare irnldkemra wdafsgldsk vknmltalka vaelqnpair erhwnqlmqv
     1321 tgvrfamdsd ttladllkln lhefegevhg ivdkavrems mekvlkelrm twssrefqye
     1381 phprthtpll ksdeelietl ednqvqlqnl msskyiaffl eevsawqrkl stadsvislw
     1441 fevqrtwshl egifigsedi raqlpqdskr fegidvdfke layevqktpn vveatnkpgl
     1501 sqklediqsr lclcekalae yldmkrlafp rfyfissadl ldilsngtnp hlvqrhlpkl
     1561 fdnlarlkfq vdseqkttkv glgmysreee yvqfsdpcdc sgqvevwlgr lldtmratvr
     1621 dgmgmavaay edkprdqwlf dhpaqvalcc tqiwwtaevg mafsrmkegy ekamkeyhkk
     1681 qvaqlntlvt mllgqlsrgd rqkimticti dvhardvvak miaqkvdngq afvwlaqlrh
     1741 rwsdeerhcw anicdaqfly cyeylgntpr lvitpltdrc yitltqslhl tmsgapagpa
     1801 gtgktettkd lgralgimvy vfncseqmdy kscgniykgl sqtgawgcfd efnrisvevl
     1861 svvavqvksv qdairekkks fnflgedinl vpsvgifitm npgyagrtel penlkalfrp
     1921 camvvpdfel iceimlvaeg flqaralark fitlyqlcke llskqdhydw glraiksvlv
     1981 vagslkradp erpeeqvlmr slrdfnipki mtddvpvfmg ligdlfpald vprkrdldfe
     2041 avvkeavlel rlqpednfvl kvvqleells vrhsvfvvga agtgksqvlr slhktyqrmr
     2101 rrpvwtdlnp kavtndelfg iinpatrewr dglfssimre lanishdgpk wmvldgdidp
     2161 mwieslntvm ddnkvltlas neriplkptm rllfeishlr tatpatvsra gilyinpsdl
     2221 gwnapvsswi drrevqsera nltilfdkyl pvcldtlrar fkkiipipeq smvqmlcyll
     2281 eclltedntp pdcpkelyel yfvfaavwaf ggsmfqdqlv dyrvefskww vaefktikfp
     2341 sqgtvfdfyv dpetkkfepw sklipqfefd pevplqaclv ptaqtvrlrf lvarllqrrr
     2401 pvllvgtagt gksvllgdtl csldtdvflv kkvpfnyytt samlqgvlek pldkkagrsy
     2461 gppgtkrlvy fmddlnmpqv daygtvqpht llrqhldygh wydrsrlclk eisnvqyvsc
     2521 mnptagsfti nprlqrhfcv falsnpeqds lsriystile qhlasgnfse avqksaqqli
     2581 alalglhqkv aatflptavk fhyvfnlrdf snifqgllfs tpeclkqpqd lvklylhesn
     2641 rvyrdrmvee vdwdtfdkiq remvkkcydd iedtleqakh mniychfakg lgepgyrpvp
     2701 sweelnqilv ealesynevn aamdlvlfed amshvcrisr vlaaprgnal lvgvggtgkq
     2761 sltrlaafls slevfqitlr kgygvpdlka dlanlylkag lksvgsvfll sdaqladeqf
     2821 lvlvndflas geipdlfpdd eveniissvr ndvrgrglld srencwrffi ervrrqlkds
     2881 vkesiskfma hvhisvnevs rlylsnerry nyttpksfle qiklyqnlll rkdkdlkakm
     2941 erlenglekl kstsaqvdel kaklaaqeve lkqknedadk liqvvgvete kvsrkkavad
     3001 eeerkvalia qeveqkqkdc eedlakaepa laaaqaalnt lnktnltelr sfgsppsavs
     3061 nvtaavmvlt apggkipkdr swkaarvama rvdsfldsli kfnkenihen clkalqpylq
     3121 dpkfnpefva tksaaaaglc swvlnierfh rvfcevqpkr qaldranael aaaqdklatv
     3181 kakiarlnen lgkltarfek atsdklrcqq eaeatactit lanrlvggla senvrwaeav
     3241 kdfkqqqstl cgdvllvtaf vsylgyftrk yrqdlldgiw rpylhqlevp ipvtprlepl
     3301 svladeaava awrnqglpad ctssenaail sscqrwpllv dpqlqgskwi ksthgeglrv
     3361 ipagqkgxrr psleggaagv vengavvave vswmrgryik igdkecalhp afrlilhtkl
     3421 anphyqpelq aqctlinfsv trdgleeqll asvvrlerpd leelksdltk qqngfkitlk
     3481 tlednllsrl ssasgnflgd talvenlest krtaaeivek vqefkvtegr ineareqyrp
     3541 aacraamlyf tmselhavhp myqfslkafh vvfqkamera apaeslagrv lsltdsitfs
     3601 vfqytarglf erdkltfsaq ltfqillrnk didpaeldfl lrypaqpgvt spveflsdha
     3661 wggikalssm eefrnldrdi egsakrwkkf vesecpeker fpqdwknksa lqrlcilral
     3721 rpdrvpcavr dfveeklgsk yvvgrsldfa ttfeesgpat pmffilspgv dplkdvekhg
     3781 kklgytfnhr nlhnislgqg qelvaeqald vaakeghwvi lqnihlvakw lgslekrleq
     3841 hsegshqdfr vflsaepapc peshiipqgi lensikitse aptgmhanlh kaldnfsqdt
     3901 lemcsqekef rsilfalcyf havvaerrkf gpqgwnrpyp fstgdltisv nvlynylqas
     3961 skvpyddlry lvgeimyggh itddwdrrlc ktyleefikp emlegelcla pgfllpgnmd
     4021 yngyhqyidd alppespyly glhpnaeigf ltqsserllr tvlelqprds stgqgavgth
     4081 eemvqallee mlekltdefn maelmarvee rtpyavvalq ecermnaltt emrrslaele
     4141 lglkgeltmt sdmetlqncl flgtvpeswv krsypstasl aswfadllar iseleawtrd
     4201 fslpstlwlg gffnpqsilt aimqttarkn rwpldkmtlq cdvtkksred fasapregay
     4261 vhglfmegar wdaqtgtiae arlkeltpam pvvfikaipd dkqdtrglyp cplyktrqrg
     4321 ptyvwtfnlk tkenpskwvl agvalllqv
//
LOCUS       XP_041321847             254 aa            linear   VRT 06-MAY-2021
DEFINITION  protein shisa-6-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041321847
VERSION     XP_041321847.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465913.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..254
                     /product="protein shisa-6-like"
     CDS             1..254
                     /gene="LOC121352726"
                     /coded_by="XM_041465913.1:<1..767"
                     /codon_start=3
                     /db_xref="GeneID:121352726"
ORIGIN      
        1 dqeqnynhli lnsdnqtpth dkprmnnilt satepydlsf srsfqnlshl ppsyesavkt
       61 npskysslkr ltdkeadeyy mrrrhlpdla argtlpinvi kmsqqgnhrd rprrpirams
      121 qdrvlsperi mpeefsmsye rilsdeqlls aerlhsqdpl lspersgype qsmsralsht
      181 dvfvstpvld ryrmskmhsh psasnnlynt lsmnptsakr qafasrrhnt veqlhyipgh
      241 hhhyrtaskt evtv
//
LOCUS       XP_041321850             145 aa            linear   VRT 06-MAY-2021
DEFINITION  protein C19orf12 homolog, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041321850
VERSION     XP_041321850.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465916.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518596.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..145
                     /product="protein C19orf12 homolog"
     CDS             1..145
                     /gene="LOC121352735"
                     /coded_by="XM_041465916.1:<1..440"
                     /codon_start=3
                     /db_xref="GeneID:121352735"
ORIGIN      
        1 lgeaedtara ddvmtmlthi atvtgmkaav thscrgaava spfiivcgml fgpvgifigg
       61 alggliawmt sedfksvpqv lmelspaerq klcaeamavv qnfdwkdaae likfvmsnsf
      121 irdkvlgvln tyvtnklkak pkytk
//
LOCUS       XP_041321851             298 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic carboxypeptidase-like protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041321851
VERSION     XP_041321851.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465917.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518607.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="cytosolic carboxypeptidase-like protein 5"
                     /calculated_mol_wt=34445
     Region          10..149
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          178..>298
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     CDS             1..298
                     /gene="LOC121352736"
                     /coded_by="XM_041465917.1:161..1057"
                     /db_xref="GeneID:121352736"
ORIGIN      
        1 meircggllf ssrfdsgnla hveqvrptep gggpaarana lpaadyefnv wtrpdcahte
       61 yengnrswfy fsvrggapgk liklhilnmn kqsrlyaqgm tpfvrtlpvr prwerirqrp
      121 sfqvveaqfv lsfvhrfleh rgattyfafc ypfsytecqd mlaqldgrfq dcrhmspssp
      181 ldsvyyhrel lchsldklrv dlltitschg mqekreprld klfpdtstpr phcftgkrvf
      241 flssrvhpge tpssfvfngf ldfilreedp raqmlrrmfv fklipmlnpd gvlrghyr
//
LOCUS       XP_041321852             168 aa            linear   VRT 06-MAY-2021
DEFINITION  mucin-7-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041321852
VERSION     XP_041321852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465918.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518618.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>168
                     /product="mucin-7-like"
     CDS             1..168
                     /gene="LOC121352737"
                     /coded_by="XM_041465918.1:<1..>504"
                     /db_xref="GeneID:121352737"
ORIGIN      
        1 twtsargapp apptaaastp papsaasata atapppappp armstsawrv tsasrtasas
       61 trpapsaasa ptatpappta ppaptwtsar gappapptaa astppapsaa sataatappp
      121 appparmsts awrvtsasrt asastrpaps aasaptatpa pptappap
//
LOCUS       XP_041321853             156 aa            linear   VRT 06-MAY-2021
DEFINITION  vitamin K epoxide reductase complex subunit 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321853
VERSION     XP_041321853.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465919.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518640.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="vitamin K epoxide reductase complex subunit
                     1-like"
                     /calculated_mol_wt=16076
     Region          5..143
                     /region_name="VKOR_euk"
                     /note="Vitamin K epoxide reductase family in eukaryotes,
                     excluding plants; cd12917"
                     /db_xref="CDD:240600"
     Site            order(37,45,51,126,129)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:240600"
     Site            126..129
                     /site_type="active"
                     /note="redox center [active]"
                     /db_xref="CDD:240600"
     CDS             1..156
                     /gene="LOC121352738"
                     /coded_by="XM_041465919.1:40..510"
                     /db_xref="GeneID:121352738"
ORIGIN      
        1 maaalraalc vagaalsvya lhvehqaard psyraacdlg psvsctrvfs srwgrglglv
       61 epvlggdsal nvpngaigll fyllqgllga srgraaavtl lgtsvasala slwlggvllf
      121 glrdlcllcl sthgvnlall glnlrrwkrg karkne
//
LOCUS       XP_041321854            1366 aa            linear   VRT 06-MAY-2021
DEFINITION  NPC1-like intracellular cholesterol transporter 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321854
VERSION     XP_041321854.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465920.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1366
                     /product="NPC1-like intracellular cholesterol transporter
                     1"
                     /calculated_mol_wt=146523
     Region          86..1314
                     /region_name="2A060601"
                     /note="Niemann-Pick C type protein family; TIGR00917"
                     /db_xref="CDD:273337"
     CDS             1..1366
                     /gene="NPC1L1"
                     /coded_by="XM_041465920.1:1..4101"
                     /db_xref="GeneID:121352739"
ORIGIN      
        1 maaslalpga llaallalel avaecgdnvv vptgchleea kvpelwrplr gahrvplapq
       61 gattvppsps pqaspsltpv rqagvcafyg ecgrnpevnv slvpskvpcl sntparvaqg
      121 allsllrsvc pelargdnet trvccsygql salrvsvgls gavlarcpac arnfanlych
      181 nicspdqslf tnvtrvanyt avpgaravle yqlfysrrya eaafascqgv rlpatggyai
      241 stmcgrygaq lctaqrwldy qgnknnglap lqinfqllpn gsepgqgivp ldapawgcdq
      301 apgadqepcs cqdcaqacpp vvppadpppp frigradgvl vicvllfaal alaflvavlc
      361 qrgaaevalk prargcpqra seawqrgler afrrwgtava trpvavlava vvvagglsag
      421 lvtlqlttdp velwsapgsr arqekefhdr hfgpflrtnq vivtapgrpg ttydsvvlgt
      481 knfsgvlaqd vllallelqe tlagttawap gagrnvslqd vcyaplnpaa pgvgdcavns
      541 vtqyfqnnrs rlalsawqqd skeqgtvdwh dhlmycvnsp lsfkditale lscmaeygap
      601 vfpyialggy reseyteaea livtyslnnf pagdprlewa lswerqflrv vrdfqrrhgr
      661 dlsvtfmaer sledeinrts gedlpvfats yllvfayial algeytawrr veskvtlalg
      721 giavvlgavl aamgllallg lrssliiiev vpflvlavga dnififvqel qqsqqepget
      781 reqhlgrvla qvapsmllcs lsetvcfllg alssmpavrt faltaalaia ldfalqmsgf
      841 valvaldrrr qeagrfdlcc ccgkgkggta gagrgllrpl lerfytpvll hplvrpavvl
      901 lflflacagl fllfhvsvgl dqelalpeds yllpyfseln rylavgvpty fvttsgynfs
      961 sengtnaics sagcdadslt qsiqlatrfp nvsylaipat swlddfldwl nptvrccrih
     1021 qsgehkgefc pststdpsca lgqclkrlrr ptaeefqrfl pwflqdrptl qcakgglgay
     1081 dtavsmdang tilatrfmay qrplrtsqey tgalraaral aeritgtlra vpgtdpafrv
     1141 fpytvtyvyy eqyltvvpeg lvtlalclvp tfavsflllg mdvrsslatl ltiamallgt
     1201 vgcmalwavp ynavalinlv aavgisvefv shitcafars rqptrvaraa eatvtmgskv
     1261 vagvamtnlp gvavlafaka rlvrifffrl nlivtvlgla hglaflpvll syigpapqvp
     1321 agedtpgdtv qgtrlglgnp cfkdtdtdtd kdkdrdkdkd kgsakg
//
LOCUS       XP_041321855             590 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat transmembrane neuronal protein 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321855
VERSION     XP_041321855.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465921.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..590
                     /product="leucine-rich repeat transmembrane neuronal
                     protein 4"
                     /calculated_mol_wt=66802
     Region          58..>311
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          64..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          87..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          279..297
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..590
                     /gene="LRRTM4"
                     /coded_by="XM_041465921.1:112..1884"
                     /db_xref="GeneID:121352740"
ORIGIN      
        1 mgfhvikqrg gsrvllgllp lallaglaga qracpkscrc dgkivycesh afrdiphnis
       61 ggsqglslry nsiqklkshq faglnqliwl yldhnyissv dedafqgirr lkelilssnk
      121 ithlhnktfh pvpnlrnldl synklqvlqa eqfkglrkll ilhlrsnslk tvpirvfqdc
      181 rnldfldlgy nrlrslsrna fagllkltel hlehnqfski nfahfprlfn lrsiylqwnr
      241 irsisqgltw twsslhnldl sgndiagvep gtfqclpnlq klnldsnklt nisqetintw
      301 islisitlsg nmwectrsic plfnwlknfk gnkestmica gpkhiqgekv sdavetynic
      361 aeiqvvpter syqapktpqr pvfipkptvs kleshqptsa mpspsadipt pavepeyehv
      421 sfhkiiagsv alflsvamil lviyvswkry pasmkqlqqh tlmkrrrkka reserqmnsp
      481 lqeyyvdykp tnsetmdvsv ngsgpctyti sgsrecevph hmktlpyysy dqpvigycqa
      541 hkplhvnkgy etvsrepaet snldlgrdhs fiatiarsaa paiyieripn
//
LOCUS       XP_041321857             201 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-36 receptor antagonist protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321857
VERSION     XP_041321857.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465923.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="interleukin-36 receptor antagonist protein-like"
                     /calculated_mol_wt=21231
     Region          60..201
                     /region_name="beta-trefoil_IL1"
                     /note="beta-trefoil domain found in the interleukin-1
                     (IL-1) family of cytokines; cl00094"
                     /db_xref="CDD:469612"
     CDS             1..201
                     /gene="LOC121352741"
                     /coded_by="XM_041465923.1:614..1219"
                     /db_xref="GeneID:121352741"
ORIGIN      
        1 mshtsraalr gtprghrpgv tsgngdtaen vidpdmvalf edflgtemav afgagrpgaq
       61 pyhyvlrdte qqglclrhgh lvatslqgan atqeepisvv pnrhlerqrc plivgirggt
      121 ralscgtgpe prlsledvgl lelfsgdkdr atpftfyktf ggsthtfeaa afpglflsta
      181 agpgealala pgatafylrr k
//
LOCUS       XP_041321858              66 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM136A, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041321858
VERSION     XP_041321858.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465924.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..66
                     /product="protein FAM136A"
     Region          <4..55
                     /region_name="DUF842"
                     /note="Eukaryotic protein of unknown function (DUF842);
                     pfam05811"
                     /db_xref="CDD:461747"
     CDS             1..66
                     /gene="FAM136A"
                     /coded_by="XM_041465924.1:<1..202"
                     /codon_start=2
                     /db_xref="GeneID:121352743"
ORIGIN      
        1 crpqdrlsrc slqcsdqakd aldsggsepr vrgqldacla tcgdqhlrlv pamakkmreg
       61 laniqq
//
LOCUS       XP_041321859             496 aa            linear   VRT 06-MAY-2021
DEFINITION  prenylcysteine oxidase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321859
VERSION     XP_041321859.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465925.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="prenylcysteine oxidase 1"
                     /calculated_mol_wt=54404
     Region          42..>142
                     /region_name="HemY"
                     /note="Protoporphyrinogen oxidase HemY/PPOX [Coenzyme
                     transport and metabolism]; COG1232"
                     /db_xref="CDD:440845"
     Region          119..485
                     /region_name="Prenylcys_lyase"
                     /note="Prenylcysteine lyase; pfam07156"
                     /db_xref="CDD:462104"
     CDS             1..496
                     /gene="PCYOX1"
                     /coded_by="XM_041465925.1:45..1535"
                     /db_xref="GeneID:121352744"
ORIGIN      
        1 mpglcrllvl lsalcppals lrhgpskiav vgggiggsaa ayflrqkfgr svqlhvleka
       61 avggrldtld vegasyesgg svihplnlhm khfvkelgls vaspqgslag vyngeefvfe
      121 esswsfinll rllwhyglnp lrmsmwvedi ldkfmriyry qmhdyafssn erllhalggd
      181 dfarllnqsi deamqkagfs qkfinqvvcp amrvnygqgv tingfvgavs lagaqsglws
      241 vkggnklvcs gliysskaev ipgtvvsiep ktrhkrggda vklyevtynt ssgltgdtyd
      301 ivliaaplgr kmanitfrnf dppipeflnp yhqtvttlvh grlntsffgy qdpqafhlga
      361 ifttdnpklf inslgvvspv rdtgtggklp lpsavwkvfs neeltkeqln llfssydsvk
      421 vkpwlaypqy sapekfppii lheqlyylng leraasamem saiaarnaal lafhrwhghs
      481 asvdqedlhe klktel
//
LOCUS       XP_041321861              96 aa            linear   VRT 06-MAY-2021
DEFINITION  small nuclear ribonucleoprotein G isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321861
VERSION     XP_041321861.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465927.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="small nuclear ribonucleoprotein G isoform X1"
                     /calculated_mol_wt=10373
     Region          5..94
                     /region_name="Sm_G"
                     /note="Sm protein G; cd01719"
                     /db_xref="CDD:212466"
     Site            order(8,12,40,45,58,79,81..82,84,87..91,93)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212466"
     Site            order(17..18,39..43,45..57,59..63)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212466"
     Site            order(57,59,83,85)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212466"
     Site            79..90
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212466"
     CDS             1..96
                     /gene="SNRPG"
                     /coded_by="XM_041465927.1:68..358"
                     /db_xref="GeneID:121352745"
ORIGIN      
        1 mskahppelk kfmdkklscc svragvpfwp cpltpvpavk lnggrhvqgi lrgfdpfmnl
       61 videcvemaa ggqqnnigmv virgnsiiml ealerv
//
LOCUS       XP_041321862              76 aa            linear   VRT 06-MAY-2021
DEFINITION  small nuclear ribonucleoprotein G isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321862
VERSION     XP_041321862.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465928.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..76
                     /product="small nuclear ribonucleoprotein G isoform X2"
                     /calculated_mol_wt=8305
     Region          5..74
                     /region_name="Sm_G"
                     /note="Sm protein G; cd01719"
                     /db_xref="CDD:212466"
     Site            order(8,12,20,25,38,59,61..62,64,67..71,73)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212466"
     Site            order(17..23,25..37,39..43)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212466"
     Site            order(37,39,63,65)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212466"
     Site            59..70
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212466"
     CDS             1..76
                     /gene="SNRPG"
                     /coded_by="XM_041465928.1:93..323"
                     /db_xref="GeneID:121352745"
ORIGIN      
        1 mskahppelk kfmdkklslk lnggrhvqgi lrgfdpfmnl videcvemaa ggqqnnigmv
       61 virgnsiiml ealerv
//
LOCUS       XP_041321863             368 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolysin TIA-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321863
VERSION     XP_041321863.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465929.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..368
                     /product="nucleolysin TIA-1 isoform X1"
                     /calculated_mol_wt=40421
     Region          8..81
                     /region_name="RRM1_TIA1"
                     /note="RNA recognition motif 1 (RRM1) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12615"
                     /db_xref="CDD:410027"
     Region          93..170
                     /region_name="RRM2_TIA1"
                     /note="RNA recognition motif 2 (RRM2) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12618"
                     /db_xref="CDD:410030"
     Site            order(105,107,109,113,116,120..121)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410030"
     Region          203..275
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..368
                     /gene="TIA1"
                     /coded_by="XM_041465929.1:94..1200"
                     /db_xref="GeneID:121352746"
ORIGIN      
        1 medempktly vgnlsrdvte alilqlfsqi gpcknckmim dtagndpycf vefyehrhaa
       61 aalaamngrk imgkevkvnw attpssqkkd tsnhfhvfvg dlspeitted ikaafapfgr
      121 isdarvvkdm atgkskgygf vsffnkwdae naiqqmggqw lggrqirtnw atrkppapks
      181 tyetstkqls ydevvtqssp snctvycggv tsglteqlmr qtfspfgqim eirvfpdkgy
      241 sfvrfsshes aahaivsvng ttieghvvkc ywgketpdma spvqqgqlsy ppaygqwaqw
      301 yggaqlgqyv pngwqvptyg vygqawsqqg fgqsqppapw lpapfsvqgq ngavlpaqpg
      361 frvgfetp
//
LOCUS       XP_041321864             330 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolysin TIA-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321864
VERSION     XP_041321864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..330
                     /product="nucleolysin TIA-1 isoform X2"
                     /calculated_mol_wt=35981
     Region          8..81
                     /region_name="RRM1_TIA1"
                     /note="RNA recognition motif 1 (RRM1) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12615"
                     /db_xref="CDD:410027"
     Region          93..>152
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          166..237
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..330
                     /gene="TIA1"
                     /coded_by="XM_041465930.1:64..1056"
                     /db_xref="GeneID:121352746"
ORIGIN      
        1 medempktly vgnlsrdvte alilqlfsqi gpcknckmim dtagndpycf vefyehrhaa
       61 aalaamngrk imgkevkvnw attpssqkkd tsnhfhvfvg dlspeitted ikaafapfgr
      121 isdarvvkdm atgkskgygf vsffnkwrap sscpttrwsl spapatapct aggsprasql
      181 mrqtfspfgq imeirvfpdk gysfvrfssh esaahaivsv ngttieghvv kcywgketpd
      241 maspvqqgql syppaygqwa qwyggaqlgq yvpngwqvpt ygvygqawsq qgfgqsqppa
      301 pwlpapfsvq gqngavlpaq pgfrvgfetp
//
LOCUS       XP_041321866             303 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolysin TIA-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321866
VERSION     XP_041321866.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465932.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="nucleolysin TIA-1 isoform X3"
                     /calculated_mol_wt=33155
     Region          <1..23
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          28..105
                     /region_name="RRM2_TIA1"
                     /note="RNA recognition motif 2 (RRM2) found in nucleolysin
                     TIA-1 isoform p40 (p40-TIA-1) and similar proteins;
                     cd12618"
                     /db_xref="CDD:410030"
     Site            order(40,42,44,48,51,55..56)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:410030"
     Region          138..210
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..303
                     /gene="TIA1"
                     /coded_by="XM_041465932.1:209..1120"
                     /db_xref="GeneID:121352746"
ORIGIN      
        1 mngrkimgke vkvnwattps sqkkdtsnhf hvfvgdlspe ittedikaaf apfgrisdar
       61 vvkdmatgks kgygfvsffn kwdaenaiqq mggqwlggrq irtnwatrkp papkstyets
      121 tkqlsydevv tqsspsnctv ycggvtsglt eqlmrqtfsp fgqimeirvf pdkgysfvrf
      181 sshesaahai vsvngttieg hvvkcywgke tpdmaspvqq gqlsyppayg qwaqwyggaq
      241 lgqyvpngwq vptygvygqa wsqqgfgqsq ppapwlpapf svqgqngavl paqpgfrvgf
      301 etp
//
LOCUS       XP_041321867             239 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolysin TIA-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321867
VERSION     XP_041321867.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465933.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..239
                     /product="nucleolysin TIA-1 isoform X4"
                     /calculated_mol_wt=26068
     Region          <1..41
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          74..146
                     /region_name="RRM3_TIAR"
                     /note="RNA recognition motif 3 (RRM3) found in nucleolysin
                     TIAR and similar proteins; cd12620"
                     /db_xref="CDD:241064"
     CDS             1..239
                     /gene="TIA1"
                     /coded_by="XM_041465933.1:130..849"
                     /db_xref="GeneID:121352746"
ORIGIN      
        1 matgkskgyg fvsffnkwda enaiqqmggq wlggrqirtn watrkppapk styetstkql
       61 sydevvtqss psnctvycgg vtsglteqlm rqtfspfgqi meirvfpdkg ysfvrfsshe
      121 saahaivsvn gttieghvvk cywgketpdm aspvqqgqls yppaygqwaq wyggaqlgqy
      181 vpngwqvpty gvygqawsqq gfgqsqppap wlpapfsvqg qngavlpaqp gfrvgfetp
//
LOCUS       XP_041321868             371 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352747 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321868
VERSION     XP_041321868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="uncharacterized protein LOC121352747 isoform X1"
                     /calculated_mol_wt=38907
     Region          222..371
                     /region_name="beta-trefoil_IL1RA"
                     /note="beta-trefoil domain found in interleukin-1 receptor
                     antagonist protein (IL-1RA) and similar proteins; cd23297"
                     /db_xref="CDD:466779"
     Site            order(222..223,225,228,230,232..234,238..241,243,248..251,
                     253,256,264,272..273,275,322,346..348,350,367,369..371)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:466779"
     Site            order(230,233..234,248..250,361..363)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:466779"
     CDS             1..371
                     /gene="LOC121352747"
                     /coded_by="XM_041465934.1:1..1116"
                     /db_xref="GeneID:121352747"
ORIGIN      
        1 mralrrcgaa grallsgsrn rgfeprrnrh grrgvpaacr avtpprhgsp rlsprggaeq
       61 wrgrgapfsa vwqhhrqlss flpsslaaar carsrgptga rgvtgaggvt gaggatrtgg
      121 lteagglsgv ggvtgaggrt gaggvtgagg lmgercpgtp rtarrghgap gtagalgrgp
      181 qgsggagrgr gglrvaalsl allflraeae gfalchapal qtkvfqyrlw dvnqrslylr
      241 deqllaghlq ganaaleekv fwvpnralep arlpvilsvr sgsrclrter gpggeprlrl
      301 qdvdirelpr agdsavaftf frsyrdglwr fesaahpgwf lctsprghqp lalcrhgdvt
      361 sqlldfyfql c
//
LOCUS       XP_041321869             316 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352747 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321869
VERSION     XP_041321869.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465935.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="uncharacterized protein LOC121352747 isoform X2"
                     /calculated_mol_wt=33604
     Region          167..316
                     /region_name="beta-trefoil_IL1RA"
                     /note="beta-trefoil domain found in interleukin-1 receptor
                     antagonist protein (IL-1RA) and similar proteins; cd23297"
                     /db_xref="CDD:466779"
     Site            order(167..168,170,173,175,177..179,183..186,188,193..196,
                     198,201,209,217..218,220,267,291..293,295,312,314..316)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:466779"
     Site            order(175,178..179,193..195,306..308)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:466779"
     CDS             1..316
                     /gene="LOC121352747"
                     /coded_by="XM_041465935.1:1..951"
                     /db_xref="GeneID:121352747"
ORIGIN      
        1 mralrrcgaa grallsgsrn rgfeprrnrh grrgvpaacr avtpprhgsp rlsprggaeq
       61 wrgrgapfsa vwqhhrqlss flpsslaaar carsrgptga rgvtgaggvt gaggatrtgg
      121 lteagglsgv ggvtgaggrt gaggvtgagg lmeaegfalc hapalqtkvf qyrlwdvnqr
      181 slylrdeqll aghlqganaa leekvfwvpn raleparlpv ilsvrsgsrc lrtergpgge
      241 prlrlqdvdi relpragdsa vaftffrsyr dglwrfesaa hpgwflctsp rghqplalcr
      301 hgdvtsqlld fyfqlc
//
LOCUS       XP_041321870             280 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: transmembrane emp24 domain-containing protein
            4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321870
VERSION     XP_041321870.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465936.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..280
                     /product="LOW QUALITY PROTEIN: transmembrane emp24
                     domain-containing protein 4"
                     /calculated_mol_wt=31021
     Region          74..275
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..280
                     /gene="TMED4"
                     /coded_by="XM_041465936.1:1..843"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121352748"
ORIGIN      
        1 mrrarreaar dgpgtegsta ralsvrrvra epgeelahaq sapggraggt maalwealra
       61 amaavlllgw gahglyfhig etekrcfiee ipdetmviga ggggesrewr gpxggngrdh
      121 swaslghgeg llgipwawgg vvmsrqygse grftftshtp gehqiclhsn strmalfagg
      181 klrvhldiqv gehtnnypei aardkltelq lrarqlleqv eqiqkeqnyq ryreerfrmt
      241 sestnqrvlw wsiaqtvili ltglwqmrhl ksffeakklv
//
LOCUS       XP_041321871             688 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C2orf42 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321871
VERSION     XP_041321871.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465937.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="uncharacterized protein C2orf42 homolog isoform
                     X1"
                     /calculated_mol_wt=72012
     Region          26..67
                     /region_name="zf-tcix"
                     /note="Putative treble-clef, zinc-finger, Zn-binding;
                     pfam14952"
                     /db_xref="CDD:464398"
     CDS             1..688
                     /gene="CUNH2orf42"
                     /coded_by="XM_041465937.1:113..2179"
                     /db_xref="GeneID:121352749"
ORIGIN      
        1 mlgnpgkrra mdpcpgrpka psflsdlgka tlrgirkcpr cgtyngtrgl scknktcgav
       61 fragarrapg adavrllsga hgqlysvrqr qrrcfvqlgv sqtaiqtpeg tlitqlssgr
      121 chapacagaa adeqcqhlkl algcqaeatp lplkssvlga vqapaeakqs lwelateptg
      181 plvqrvtksv lvvkckasqr hslgylhasf gqrrfscacr apghgrakge reedeeeeee
      241 eeeeepparc ihflacicaf asdeslaqef seflasdgsg lkgtvipqll rgpgstarar
      301 gaaaakakrr rkdlgpgpqv pgpllapdpa hpsprrsslr klpivsssps ssssslkrhg
      361 cpqaldesqv slsfqewlgs vterihqtmh yqfegrpepl vfhipqsffe alqqrissgs
      421 gkkrlpnstt geadlrharg aagdhpelra eprrllralp qpprgggepa rgagppreta
      481 paaapgaadl pqsrthvpha egahalhhrv dprhpaalpp graapqvpvr aprgapaapr
      541 prdpprrapp aapappghhr lplspprrdg glglgaapgs tprinrqhpt glsvcggagg
      601 pqngggnmgd ppewggkggk twgtprmgre twetpkvggg slgddlpqng rgepgrppkw
      661 gggggvghlg dpqngggkga grapkgsq
//
LOCUS       XP_041321872             653 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C2orf42 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321872
VERSION     XP_041321872.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465938.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..653
                     /product="uncharacterized protein C2orf42 homolog isoform
                     X2"
                     /calculated_mol_wt=67947
     Region          26..67
                     /region_name="zf-tcix"
                     /note="Putative treble-clef, zinc-finger, Zn-binding;
                     pfam14952"
                     /db_xref="CDD:464398"
     CDS             1..653
                     /gene="CUNH2orf42"
                     /coded_by="XM_041465938.1:113..2074"
                     /db_xref="GeneID:121352749"
ORIGIN      
        1 mlgnpgkrra mdpcpgrpka psflsdlgka tlrgirkcpr cgtyngtrgl scknktcgav
       61 fragarrapg adavrllsga hgqlysvrqr qrrcfvqlgv sqtaiqtpeg tlitqlssgr
      121 chapacagaa adeqcqhlkl algcqaeatp lplkssvlga vqapaeakqs lwelateptg
      181 plvqrvtksv lvvkckasqr hslgylhasf gqrrfscacr apghgrakge reedeeeeee
      241 eeeeepparc ihflacicaf asdeslaqef seflasdgsg lkgtvipqll rgpgstarar
      301 gaaaakakrr rkdlgpgpqv pgpllapdpa hpsprrsslr klpivsssps ssssslkrhg
      361 rpeplvfhip qsffealqqr issgsgkkrl pnsttgeadl rhargaagdh pelraeprrl
      421 lralpqpprg ggepargagp pretapaaap gaadlpqsrt hvphaegaha lhhrvdprhp
      481 aalppgraap qvpvraprga paaprprdpp rrappaapap pghhrlplsp prrdgglglg
      541 aapgstprin rqhptglsvc ggaggpqngg gnmgdppewg gkggktwgtp rmgretwetp
      601 kvgggslgdd lpqngrgepg rppkwggggg vghlgdpqng ggkgagrapk gsq
//
LOCUS       XP_041321874             587 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C2orf42 homolog isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321874
VERSION     XP_041321874.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465940.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="uncharacterized protein C2orf42 homolog isoform
                     X3"
                     /calculated_mol_wt=63764
     Region          26..67
                     /region_name="zf-tcix"
                     /note="Putative treble-clef, zinc-finger, Zn-binding;
                     pfam14952"
                     /db_xref="CDD:464398"
     CDS             1..587
                     /gene="CUNH2orf42"
                     /coded_by="XM_041465940.1:113..1876"
                     /db_xref="GeneID:121352749"
ORIGIN      
        1 mlgnpgkrra mdpcpgrpka psflsdlgka tlrgirkcpr cgtyngtrgl scknktcgav
       61 fragarrapg adavrllsga hgqlysvrqr qrrcfvqlgv sqtaiqtpeg tlitqlssgr
      121 chapacagaa adeqcqhlkl algcqaeatp lplkssvlga vqapaeakqs lwelateptg
      181 plvqrvtksv lvvkckasqr hslgylhasf gqrrfscacr apghgrakge reedeeeeee
      241 eeeeepparc ihflacicaf asdeslaqef seflasdgsg lkgtvipqll rgpgstarar
      301 gaaaakakrr rkdlgpgpqv pgpllapdpa hpsprrsslr klpivsssps ssssslkrhg
      361 cpqaldesqv slsfqewlgs vterihqtmh yqfegrpepl vfhipqsffe alqqrissgs
      421 gkkrlpnstt afvrrdalpl gtfskytwhi tnvlqvkqif dtpevpleit rsfvqnrdgs
      481 yepfrsprve veslpeglgp hekqpplrpl elqtflkvgh tsptqkeptp ftiewipdil
      541 prsrlgelrl kfqyghhggp rqppgrgtpp aeppplplpp lgtiafp
//
LOCUS       XP_041321875             552 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C2orf42 homolog isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321875
VERSION     XP_041321875.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465941.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..552
                     /product="uncharacterized protein C2orf42 homolog isoform
                     X4"
                     /calculated_mol_wt=59699
     Region          26..67
                     /region_name="zf-tcix"
                     /note="Putative treble-clef, zinc-finger, Zn-binding;
                     pfam14952"
                     /db_xref="CDD:464398"
     CDS             1..552
                     /gene="CUNH2orf42"
                     /coded_by="XM_041465941.1:113..1771"
                     /db_xref="GeneID:121352749"
ORIGIN      
        1 mlgnpgkrra mdpcpgrpka psflsdlgka tlrgirkcpr cgtyngtrgl scknktcgav
       61 fragarrapg adavrllsga hgqlysvrqr qrrcfvqlgv sqtaiqtpeg tlitqlssgr
      121 chapacagaa adeqcqhlkl algcqaeatp lplkssvlga vqapaeakqs lwelateptg
      181 plvqrvtksv lvvkckasqr hslgylhasf gqrrfscacr apghgrakge reedeeeeee
      241 eeeeepparc ihflacicaf asdeslaqef seflasdgsg lkgtvipqll rgpgstarar
      301 gaaaakakrr rkdlgpgpqv pgpllapdpa hpsprrsslr klpivsssps ssssslkrhg
      361 rpeplvfhip qsffealqqr issgsgkkrl pnsttafvrr dalplgtfsk ytwhitnvlq
      421 vkqifdtpev pleitrsfvq nrdgsyepfr sprveveslp eglgphekqp plrplelqtf
      481 lkvghtsptq keptpftiew ipdilprsrl gelrlkfqyg hhggprqppg rgtppaeppp
      541 lplpplgtia fp
//
LOCUS       XP_041321876             163 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S24, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041321876
VERSION     XP_041321876.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465942.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..163
                     /product="28S ribosomal protein S24, mitochondrial"
                     /calculated_mol_wt=17830
     Region          32..163
                     /region_name="MRP-S24"
                     /note="Mitochondrial ribosome subunit S24; pfam14955"
                     /db_xref="CDD:464401"
     CDS             1..163
                     /gene="MRPS24"
                     /coded_by="XM_041465942.1:32..523"
                     /db_xref="GeneID:121352750"
ORIGIN      
        1 maaaaralrv lpralrvpsa trqlhsspvc lkaraarvra gkgdkmvtye qahapqhigh
       61 rkgwlslhtg nlrgeagaap raledaflrr flagtfpgll adeavlkrrg nllvicalla
      121 ralpphklyf llgyaetllg hfykcpvrle lqtvparvpy kfi
//
LOCUS       XP_041321877             541 aa            linear   VRT 06-MAY-2021
DEFINITION  probable ATP-dependent RNA helicase DDX56 [Pyrgilauda ruficollis].
ACCESSION   XP_041321877
VERSION     XP_041321877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465943.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..541
                     /product="probable ATP-dependent RNA helicase DDX56"
                     /calculated_mol_wt=59673
     Region          10..408
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     Region          <352..>471
                     /region_name="RecQ"
                     /note="Superfamily II DNA helicase RecQ [Replication,
                     recombination and repair]; COG0514"
                     /db_xref="CDD:440280"
     CDS             1..541
                     /gene="DDX56"
                     /coded_by="XM_041465943.1:34..1659"
                     /db_xref="GeneID:121352751"
ORIGIN      
        1 maaemeekgf ehmgldgrll ravaelgwav ptaiqaraip lamegrdlla rartgsgktg
       61 ayglpllhkl lgikeaspav pqavralvlv psaelarqvg htlrrlaafc arqlrvaelc
      121 ghsdiaeqrp vlmeqpdivv gtpgrvlahv aghslalrpw lellvldead lllsfgfgdd
      181 irallwcrwc ppsrgcravp isssspvqvv ppeprlpgrs qlqqfqlrcg teedkfllla
      241 allklrllrg rallfvgsla rafrvklfle qfgiaacaln pqlparsrch viaqfnrgly
      301 dyivatdeeg paepprhrpr kggtarkgdk kgdrkgqppq cpqdpefgvs rgidfqnvaa
      361 vinfdvpnsv etyihrvgrt argdspgtal tlalpdeleg lrriedtlaa engqsmlqpy
      421 efrmeeietl ryrcrdamra vtkqavrear lrelrqelln ceklkvyfed nprdlqalrh
      481 drplhpasvq phlghvpdyl vppslrgiad pnpkkrkcpr gagarrggsk vrdpkspqnp
      541 p
//
LOCUS       XP_041321878             326 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 81 [Pyrgilauda ruficollis].
ACCESSION   XP_041321878
VERSION     XP_041321878.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465944.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 45% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="coiled-coil domain-containing protein 81"
                     /calculated_mol_wt=36160
     Region          <18..72
                     /region_name="HU-CCDC81_euk_1"
                     /note="CCDC81 eukaryotic HU domain 1; pfam14908"
                     /db_xref="CDD:464364"
     Region          89..163
                     /region_name="HU-CCDC81_euk_2"
                     /note="CCDC81 eukaryotic HU domain 2; pfam18289"
                     /db_xref="CDD:465696"
     CDS             1..326
                     /gene="CCDC81"
                     /coded_by="XM_041465944.1:1..981"
                     /db_xref="GeneID:121352752"
ORIGIN      
        1 mpsitptvvf pcfperkavw davasniqqq lllhkgirip tlgsfdvvht etlvenktvi
       61 lqrpvfhlar nlggvqnlen rddlaggkql eplkyakvat qasvsrkkve ccilgtmsll
      121 hhclekgmsv afvlrdvgvl liegsmvlmr fyldflekvt geriqdratl kalqqldivv
      181 srvvpvasls fsghviifpn feqtfqptsl prdhlkdfgf vpgedkrnki slppirqgme
      241 grlpglpmpa yqgstakage qpqdeevmei rhsprvrklp visgaaarrk qpvadqdtgk
      301 pdamasqlpm lkkremvarg pwpwve
//
LOCUS       XP_041321879             116 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase SKI2W-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041321879
VERSION     XP_041321879.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465945.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518652.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>116
                     /product="helicase SKI2W-like"
     Region          <16..>92
                     /region_name="Dob10"
                     /note="Superfamily II RNA helicase [Replication,
                     recombination and repair]; COG4581"
                     /db_xref="CDD:443638"
     CDS             1..116
                     /gene="LOC121352754"
                     /coded_by="XM_041465945.1:72..>419"
                     /db_xref="GeneID:121352754"
ORIGIN      
        1 mggsnpgqer gvwlslletl rerellpavt ftfsrgrcee qaaalgslel lggperaqvr
       61 qfltrclarl rgsdrrlpqv lqlsdllqrg igekveiwee klrekegngv vivvgn
//
LOCUS       XP_041321880             118 aa            linear   VRT 06-MAY-2021
DEFINITION  josephin-2-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321880
VERSION     XP_041321880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465946.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518740.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="josephin-2-like isoform X1"
                     /calculated_mol_wt=12938
     Region          <10..94
                     /region_name="Josephin"
                     /note="pfam02099"
                     /db_xref="CDD:460444"
     CDS             1..118
                     /gene="LOC121352755"
                     /coded_by="XM_041465946.1:186..542"
                     /db_xref="GeneID:121352755"
ORIGIN      
        1 meshcpsgtl glaavwwdkr rplerlslph vlgfllnvps rvtlgtlalp lsrphwlcvr
       61 pfgdtfynld sklaspapig aepqlrqflr aalakapsel flvvtrdvee agtwlspe
//
LOCUS       XP_041321882             102 aa            linear   VRT 06-MAY-2021
DEFINITION  josephin-2-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321882
VERSION     XP_041321882.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465948.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518740.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..102
                     /product="josephin-2-like isoform X2"
                     /calculated_mol_wt=11357
     Region          <10..80
                     /region_name="Josephin"
                     /note="pfam02099"
                     /db_xref="CDD:460444"
     CDS             1..102
                     /gene="LOC121352755"
                     /coded_by="XM_041465948.1:193..501"
                     /db_xref="GeneID:121352755"
ORIGIN      
        1 meshcpsgtl glaavwwdkr rplerlslph vlgfllnvps rvtlgtlalp lsrphwlcvr
       61 pfgdtfynld sklaspapig aepqlsscgr rwprlprscs ww
//
LOCUS       XP_041321883             806 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase MARCHF7 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321883
VERSION     XP_041321883.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465949.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="E3 ubiquitin-protein ligase MARCHF7 isoform X1"
                     /calculated_mol_wt=88734
     Region          606..664
                     /region_name="RING_CH-C4HC3_MARCH7"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH7 (MARCH7); cd16812"
                     /db_xref="CDD:438461"
     CDS             1..806
                     /gene="MARCHF7"
                     /coded_by="XM_041465949.1:620..3040"
                     /db_xref="GeneID:121352756"
ORIGIN      
        1 mslyriqrme skpsriprri svqassspvg srtgnslsga ystresswrl esgyqessvl
       61 nsssrdwrig erdtretawk ltasspthys gtldhphsgr flgsrsrlst ssshfpsgcy
      121 gesertqgay prlhshqqds dskrpklsct stssvrsngl tafsdsswrc sriprsssvv
      181 lgslgtdlvr ertqlerrad lsvnnlvdps ygnsdfspst ylqdrpassy aegarpkens
      241 lsalrlnapm nrqlpsdhrp sffnrdsnvs ssrpsyssrq rrnelespqr svqppfslta
      301 irdetasssg serilssqrs lnesaadseg rrttrqllsr lassmsstff srrssqdplh
      361 trslgpeest viprvqaaal sssngaatpe vpglqsseas qgfsflgrrw glsgvsqnrn
      421 sdsdgesyrp dtesrstgsw lssslrnrct plfsrrrreg rdestriata dttarsqhvf
      481 rrresaeets leasdsppra svsrptpavs vistataspp dsassgrssg ilpaslfrfa
      541 vppalgssls dnlmitvdii psgwnqsdgq esgkskipps rdperlqkik esllleesed
      601 eegdlcricq mssassdnll iepckctgsl qyvhqecmkk wlqskinsgs sleavttcel
      661 ckeklnlnle dfdvhelyra haneqadyef issglylvvl lhlceqrfsd mlgtaneast
      721 rvrllkmtlk tdagrtfilq etsriaaeml nwqeqhqhaf glflslvkca lnitvvfeal
      781 lnskstaaqw ssvdlrttqh vcgldt
//
LOCUS       XP_041321884             798 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase MARCHF7 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321884
VERSION     XP_041321884.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465950.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..798
                     /product="E3 ubiquitin-protein ligase MARCHF7 isoform X2"
                     /calculated_mol_wt=87686
     Region          598..656
                     /region_name="RING_CH-C4HC3_MARCH7"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH7 (MARCH7); cd16812"
                     /db_xref="CDD:438461"
     CDS             1..798
                     /gene="MARCHF7"
                     /coded_by="XM_041465950.1:61..2457"
                     /db_xref="GeneID:121352756"
ORIGIN      
        1 meskpsripr risvqasssp vgsrtgnsls gaystressw rlesgyqess vlnsssrdwr
       61 igerdtreta wkltasspth ysgtldhphs grflgsrsrl stssshfpsg cygesertqg
      121 ayprlhshqq dsdskrpkls ctstssvrsn gltafsdssw rcsriprsss vvlgslgtdl
      181 vrertqlerr adlsvnnlvd psygnsdfsp stylqdrpas syaegarpke nslsalrlna
      241 pmnrqlpsdh rpsffnrdsn vsssrpsyss rqrrnelesp qrsvqppfsl tairdetass
      301 sgserilssq rslnesaads egrrttrqll srlassmsst ffsrrssqdp lhtrslgpee
      361 stviprvqaa alsssngaat pevpglqsse asqgfsflgr rwglsgvsqn rnsdsdgesy
      421 rpdtesrstg swlssslrnr ctplfsrrrr egrdestria tadttarsqh vfrrresaee
      481 tsleasdspp rasvsrptpa vsvistatas ppdsassgrs sgilpaslfr favppalgss
      541 lsdnlmitvd iipsgwnqsd gqesgkskip psrdperlqk ikeslllees edeegdlcri
      601 cqmssassdn lliepckctg slqyvhqecm kkwlqskins gssleavttc elckeklnln
      661 ledfdvhely rahaneqady efissglylv vllhlceqrf sdmlgtanea strvrllkmt
      721 lktdagrtfi lqetsriaae mlnwqeqhqh afglflslvk calnitvvfe allnskstaa
      781 qwssvdlrtt qhvcgldt
//
LOCUS       XP_041321885             798 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase MARCHF7 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321885
VERSION     XP_041321885.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465951.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..798
                     /product="E3 ubiquitin-protein ligase MARCHF7 isoform X2"
                     /calculated_mol_wt=87686
     Region          598..656
                     /region_name="RING_CH-C4HC3_MARCH7"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH7 (MARCH7); cd16812"
                     /db_xref="CDD:438461"
     CDS             1..798
                     /gene="MARCHF7"
                     /coded_by="XM_041465951.1:142..2538"
                     /db_xref="GeneID:121352756"
ORIGIN      
        1 meskpsripr risvqasssp vgsrtgnsls gaystressw rlesgyqess vlnsssrdwr
       61 igerdtreta wkltasspth ysgtldhphs grflgsrsrl stssshfpsg cygesertqg
      121 ayprlhshqq dsdskrpkls ctstssvrsn gltafsdssw rcsriprsss vvlgslgtdl
      181 vrertqlerr adlsvnnlvd psygnsdfsp stylqdrpas syaegarpke nslsalrlna
      241 pmnrqlpsdh rpsffnrdsn vsssrpsyss rqrrnelesp qrsvqppfsl tairdetass
      301 sgserilssq rslnesaads egrrttrqll srlassmsst ffsrrssqdp lhtrslgpee
      361 stviprvqaa alsssngaat pevpglqsse asqgfsflgr rwglsgvsqn rnsdsdgesy
      421 rpdtesrstg swlssslrnr ctplfsrrrr egrdestria tadttarsqh vfrrresaee
      481 tsleasdspp rasvsrptpa vsvistatas ppdsassgrs sgilpaslfr favppalgss
      541 lsdnlmitvd iipsgwnqsd gqesgkskip psrdperlqk ikeslllees edeegdlcri
      601 cqmssassdn lliepckctg slqyvhqecm kkwlqskins gssleavttc elckeklnln
      661 ledfdvhely rahaneqady efissglylv vllhlceqrf sdmlgtanea strvrllkmt
      721 lktdagrtfi lqetsriaae mlnwqeqhqh afglflslvk calnitvvfe allnskstaa
      781 qwssvdlrtt qhvcgldt
//
LOCUS       XP_041321886             798 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase MARCHF7 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321886
VERSION     XP_041321886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..798
                     /product="E3 ubiquitin-protein ligase MARCHF7 isoform X2"
                     /calculated_mol_wt=87686
     Region          598..656
                     /region_name="RING_CH-C4HC3_MARCH7"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH7 (MARCH7); cd16812"
                     /db_xref="CDD:438461"
     CDS             1..798
                     /gene="MARCHF7"
                     /coded_by="XM_041465952.1:156..2552"
                     /db_xref="GeneID:121352756"
ORIGIN      
        1 meskpsripr risvqasssp vgsrtgnsls gaystressw rlesgyqess vlnsssrdwr
       61 igerdtreta wkltasspth ysgtldhphs grflgsrsrl stssshfpsg cygesertqg
      121 ayprlhshqq dsdskrpkls ctstssvrsn gltafsdssw rcsriprsss vvlgslgtdl
      181 vrertqlerr adlsvnnlvd psygnsdfsp stylqdrpas syaegarpke nslsalrlna
      241 pmnrqlpsdh rpsffnrdsn vsssrpsyss rqrrnelesp qrsvqppfsl tairdetass
      301 sgserilssq rslnesaads egrrttrqll srlassmsst ffsrrssqdp lhtrslgpee
      361 stviprvqaa alsssngaat pevpglqsse asqgfsflgr rwglsgvsqn rnsdsdgesy
      421 rpdtesrstg swlssslrnr ctplfsrrrr egrdestria tadttarsqh vfrrresaee
      481 tsleasdspp rasvsrptpa vsvistatas ppdsassgrs sgilpaslfr favppalgss
      541 lsdnlmitvd iipsgwnqsd gqesgkskip psrdperlqk ikeslllees edeegdlcri
      601 cqmssassdn lliepckctg slqyvhqecm kkwlqskins gssleavttc elckeklnln
      661 ledfdvhely rahaneqady efissglylv vllhlceqrf sdmlgtanea strvrllkmt
      721 lktdagrtfi lqetsriaae mlnwqeqhqh afglflslvk calnitvvfe allnskstaa
      781 qwssvdlrtt qhvcgldt
//
LOCUS       XP_041321887             747 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase MARCHF7 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321887
VERSION     XP_041321887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..747
                     /product="E3 ubiquitin-protein ligase MARCHF7 isoform X3"
                     /calculated_mol_wt=82223
     Region          606..664
                     /region_name="RING_CH-C4HC3_MARCH7"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     membrane-associated RING-CH7 (MARCH7); cd16812"
                     /db_xref="CDD:438461"
     CDS             1..747
                     /gene="MARCHF7"
                     /coded_by="XM_041465953.1:620..2863"
                     /db_xref="GeneID:121352756"
ORIGIN      
        1 mslyriqrme skpsriprri svqassspvg srtgnslsga ystresswrl esgyqessvl
       61 nsssrdwrig erdtretawk ltasspthys gtldhphsgr flgsrsrlst ssshfpsgcy
      121 gesertqgay prlhshqqds dskrpklsct stssvrsngl tafsdsswrc sriprsssvv
      181 lgslgtdlvr ertqlerrad lsvnnlvdps ygnsdfspst ylqdrpassy aegarpkens
      241 lsalrlnapm nrqlpsdhrp sffnrdsnvs ssrpsyssrq rrnelespqr svqppfslta
      301 irdetasssg serilssqrs lnesaadseg rrttrqllsr lassmsstff srrssqdplh
      361 trslgpeest viprvqaaal sssngaatpe vpglqsseas qgfsflgrrw glsgvsqnrn
      421 sdsdgesyrp dtesrstgsw lssslrnrct plfsrrrreg rdestriata dttarsqhvf
      481 rrresaeets leasdsppra svsrptpavs vistataspp dsassgrssg ilpaslfrfa
      541 vppalgssls dnlmitvdii psgwnqsdgq esgkskipps rdperlqkik esllleesed
      601 eegdlcricq mssassdnll iepckctgsl qyvhqecmkk wlqskinsgs sleavttcel
      661 ckeklnlnle dfdvhelyra haneqadyef issglylvvl lhlceqrfsd mlgtaneast
      721 rvrfinlart lqahmediet seddsed
//
LOCUS       XP_041321888            2513 aa            linear   VRT 06-MAY-2021
DEFINITION  fatty acid synthase [Pyrgilauda ruficollis].
ACCESSION   XP_041321888
VERSION     XP_041321888.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465954.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2513
                     /product="fatty acid synthase"
                     /calculated_mol_wt=275409
     Region          1..>809
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          874..1060
                     /region_name="hot_dog"
                     /note="The hotdog fold was initially identified in the E.
                     coli FabA (beta-hydroxydecanoyl-acyl carrier protein
                     (ACP)-dehydratase) structure and subsequently in 4HBT
                     (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A
                     number of other seemingly unrelated...; cl00509"
                     /db_xref="CDD:469797"
     Region          1322..>1552
                     /region_name="KR_1_FAS_SDR_x"
                     /note="beta-ketoacyl reductase (KR) domain of fatty acid
                     synthase (FAS), subgroup 1, complex (x) SDRs; cd08954"
                     /db_xref="CDD:187657"
     Region          1567..1857
                     /region_name="PKS_ER"
                     /note="Enoylreductase; smart00829"
                     /db_xref="CDD:214840"
     Site            order(1576,1657,1678,1680..1683,1702..1703,1707,
                     1726..1727,1750,1772,1797..1799,1846..1847,1849,1851)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176179"
     Region          <1879..2115
                     /region_name="KR_1_FAS_SDR_x"
                     /note="beta-ketoacyl reductase (KR) domain of fatty acid
                     synthase (FAS), subgroup 1, complex (x) SDRs; cd08954"
                     /db_xref="CDD:187657"
     Site            order(1896..1897,1899,1919..1922,1947..1950,1974..1976,
                     1997..1998,2022..2023,2037,2064..2065)
                     /site_type="other"
                     /note="putative NADP binding site [chemical binding]"
                     /db_xref="CDD:187657"
     Site            order(1998,2024,2037,2041)
                     /site_type="active"
                     /db_xref="CDD:187657"
     Region          2114..>2173
                     /region_name="PKS_PP"
                     /note="Phosphopantetheine attachment site; smart00823"
                     /db_xref="CDD:214834"
     Region          2244..2503
                     /region_name="Thioesterase"
                     /note="Thioesterase domain; pfam00975"
                     /db_xref="CDD:395776"
     CDS             1..2513
                     /gene="FASN"
                     /coded_by="XM_041465954.1:139..7680"
                     /db_xref="GeneID:121352757"
ORIGIN      
        1 medvviagia grlpesenlq efwenllngv dmvteddrrw kpgiyglpkr ngklkdlskf
       61 dasffgvhpk qantmdpqlr lllevsyeai ldgginpgal rgtdtgvwvg asgseageal
      121 sqdpeellgy smtgcqraml anrisyfydf ngpsltvdta cssslvalen aykairhgqc
      181 stalvggvnl llkpntsvqf mklgllsrdg ackafdvsgd gycrseaavv vllmkrsmak
      241 riyativnag vntdgfkeqg vtfpsgemqe klirslyres gvkpeeveyi eahgtgtkvg
      301 dpqevnsitg ifcdckrepl ligstksnmg hpepasglaa lakvilsleh glwtpnlhfn
      361 tpnpdipalr dgslevvckp tpvkggligi nsfgfggana hvilrpnkkk cqpletsnmp
      421 rlvqisgrtq eavetliqes rkhgecspfv nllndisavp vssmpyrgyt lvgtesdike
      481 iqqvqasgrp lwyicsgmgt qwkgmglslm kldlfrqsim rsdealkntg lkvsdlllqa
      541 nentfddtvh afvglaaiqi aqidmlkaag lhpdgilghs vgelacgyad nslsheeail
      601 aaywrgrcvk eaklppggma avgltweeck qrcppnvvpa chnsedtvtv sgpldpvnef
      661 varlkkegvf akevrsagva fhshymasia pallsalkkv iprpkprsar wistsipesq
      721 wqgdlaknss aeyhvnnlvn pvlfheglkh ipenavvvei aphallqail krtlkptcti
      781 lplmkkdhkn nleffltqig kihltginvl gnnlfpsvey pvpvgtplis pyikwdhsqd
      841 wdvpkaedfp agskgsasas vynidvspes pdhylighci dgrvlypatg ylvlawrtla
      901 rslgvameem avifedvtih qatiipkkgp vqlevrlmpa shcfevsgng nlavsgkisl
      961 lentaqknfs nqpdgfqtqv drsskpglsk edvyqelhlr gynygptfqg vlecnseasa
     1021 gkvlwngnwv tfldtllhml ilpetgrslr lptrirsvci dpvlhrehvc qyqdnieafe
     1081 vvvdhcldsl kaggvqingl hasvaprrqq eqipptlekf cfvpytessc lsssahlhay
     1141 leqckgliqk lqskvamhgv klvipglena vaatgsstqk glqhilaeic rlelngnlhs
     1201 elqqvvirek mhfqndplls glldsaelrt cldvalenmi shrmkivean agsgqlfsrv
     1261 ksilnaqpll qvdyiatdci lenlsaiete lqdagvvssr wdpsslpsgn ltdadlvvyn
     1321 cstsvlvntt eilpnlaaav keggfvllht llkgetlget vsfltspdlq qkhsflseaq
     1381 wedlfskasl nlvamkksff gsviflcrrq apvktpvflp vdetnyqwve slkeiladps
     1441 ekpvwltats cansgilgmv nclrleaegh rircvfisnl npssavppts lsslemqkiv
     1501 qkdlvmnvyr dgkwgsfrhl plqqaqpqel teyayvnvlt rgdlsslrwi vsplrhfhtt
     1561 dpnvllckvy yaslnfrdim latgklspda ipgnwalqqc mlgmefsgrd vagrrvmgll
     1621 pakglatvvd cekrflwevp enwtleeaas vpvvyatayy alvvrggmkk gesvlihsgs
     1681 ggvgqaaiai alsmgcrvft tvgstekrky lqarfpqlda nsfsssrdtt feqhirrvtn
     1741 gkgvnlvlns laeeklqasl rclarhgrfl eigkfdlsnn sqlgmslflk nvafhgilld
     1801 sifdegnqew evvsellkkg irdgvvkplr stvfskeeve aafrfmaqgk higkviikvq
     1861 eeekeyplrk sepvrisais rtscpptksy iitgglggfg lelaqwlver gaqkivltsr
     1921 sgirtgyqak rvkewkalgi kvlvstsdig tlegtqqlie ealklgpvgg ifnlavvlrd
     1981 gmienqtpel fcevnkpkys gtlhldwvtr kkcpdldyfv vfssvscgrg nagqsnygfa
     2041 nstmericeq rhhdglpgla iqwgaigdvg ilmktmgnkd ivvggtipqq mssclevldv
     2101 flnqphpvms sfvlaekvsv kaeggsqrdl veavahilgv rdvsslnaes sladlgldsl
     2161 mgvevrqtle rdydmvmtmr eirlltinkl relsskskkt eelkssplmk agpgespkld
     2221 lnillvnpeg ptitrlndvq smerplflvh piegsiavfy tlasrlhmpc yglqctkaap
     2281 ldsiqslaay yidcmkqiqp egpyriagys fgacvafemc sqlqaqqnas halnslflfd
     2341 gshsfvaayt qsyrakltqg neaaleteal cafvqqftgt eynkllevll plkdlearvn
     2401 aavdliteih tninrealsf aatsfyhklk aadkyipesk yhgnvtlmra ksrneyeegl
     2461 grdyklsevc dgkisvhvie gdhrtllegn gvesiigiih sslaeprvsv reg
//
LOCUS       XP_041321889            1192 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321889
VERSION     XP_041321889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1192
                     /product="plakophilin-4 isoform X1"
                     /calculated_mol_wt=131198
     Region          168..>361
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          515..554
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          528..553
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(544,548,552,586,590,594,630,635,639)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          557..596
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          561..597
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          601..642
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          605..640
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          647..698
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          706..747
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          823..853
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          846..>967
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          863..898
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          865..897
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(888,892,896,934,938,942,980,984)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          904..945
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          951..986
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1192
                     /gene="PKP4"
                     /coded_by="XM_041465955.1:1..3579"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mpapeqspmv eeglpqtaqe tstgpgmepe ttattilasv keqelqfqrl treleverqi
       61 vanqlercrl gaespsiast ssteksfpwr ssdppptsvs kpqvsegvht naydirteae
      121 qgtlyspeqt slhesegsvg nsrsstqmns ysdsgyqeis sfhnsqnlnk aeirqqhslg
      181 gplnshdvvr ssraegqtsv qpsantatnr vmrrvssvps raqspsyavs tsmspsrgsl
      241 rtslgsgygs psvaeqrslp shayssttlp vqragspyga hrpaspsavr rvgsltsrqa
      301 npgsgtapyq tagrvgspla ltdvqtrvgs psqtqlgsss pkrsgmtavp qhlgttlqrt
      361 ihdmeqygqq ydiyermvpp rpdsltglrs syasqhsqlg qelrsavspd mhitpiyegr
      421 tfyspvyrsp nhgtielhhg sqaalfrtgs gmgnlqrsss qrstltyqrn tyglptaaal
      481 aeplralpfr lpepgygrlh pdggttrsps idsihkdpre fawrdpelpe vihmlqhqfp
      541 svqanaaayl qhlcfgdnkv ktevcrlggi khlvdlldhr vlevqknacg alrnlvygks
      601 tdenkiamkn vggipallrl lrksvdgevk elvtgvlwnl sscdavkmti irdalstltn
      661 tvivphsgwn sssfdddhkm kfqtslvlrn ttgclrnlss ageearkqmr sceglvdsll
      721 yvihtcvnts dydsktvenc vctlrnlsyr lelevpqarl lginelddll gkespskdse
      781 pscwgkkkkk kkktsqedqw dgvgpipgfs kspkgvemlw hpsvvkpylt llaessnpat
      841 legsagslqn lsagnwkfaa yiraavrkek glpilvellr mdndrvvssv atalrnmald
      901 vrnkeligky amrdlvnrlp ggngpsilsd etvaaiccal hevtsknmen akaladtggi
      961 eklvnitkgr gdrsslkvvk aaaqvlntlw qyrdlrsiyk kdgwnqshfi tpvstlerer
     1021 fkshpslsta nqqmspvmqs vgstssspal lgireprsey drthpsmqyy ssqgdviahk
     1081 diytgsskas piyissyssp areqnrrlqq hqqlyysqed strknydayr lylqsphsye
     1141 dpyfddrvhf patsdyttqy glksttnyvd fystrrssyr aeqypgspds wv
//
LOCUS       XP_041321890            1191 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321890
VERSION     XP_041321890.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465956.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1191
                     /product="plakophilin-4 isoform X2"
                     /calculated_mol_wt=131070
     Region          168..>361
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          515..554
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          528..553
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(544,548,552,586,590,594,630,635,639)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          557..596
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          561..597
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          601..642
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          605..640
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          647..698
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          706..747
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          823..853
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          846..>967
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          863..898
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          865..897
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(888,892,896,934,938,942,980,984)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          904..945
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          951..986
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1191
                     /gene="PKP4"
                     /coded_by="XM_041465956.1:1..3576"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mpapeqspmv eeglpqtaqe tstgpgmepe ttattilasv keqelqfqrl treleverqi
       61 vanqlercrl gaespsiast ssteksfpwr ssdppptsvs kpqvsegvht naydirteae
      121 qgtlyspeqt slhesegsvg nsrsstqmns ysdsgyqeis sfhnsqnlnk aeirqqhslg
      181 gplnshdvvr ssraegqtsv qpsantatnr vmrrvssvps raqspsyavs tsmspsrgsl
      241 rtslgsgygs psvaeqrslp shayssttlp vqragspyga hrpaspsavr rvgsltsrqa
      301 npgsgtapyq tagrvgspla ltdvqtrvgs psqtqlgsss pkrsgmtavp qhlgttlqrt
      361 ihdmeqygqq ydiyermvpp rpdsltglrs syasqhsqlg qelrsavspd mhitpiyegr
      421 tfyspvyrsp nhgtielhhg sqaalfrtgs gmgnlqrsss qrstltyqrn tyglptaaal
      481 aeplralpfr lpepgygrlh pdggttrsps idsihkdpre fawrdpelpe vihmlqhqfp
      541 svqanaaayl qhlcfgdnkv ktevcrlggi khlvdlldhr vlevqknacg alrnlvygks
      601 tdenkiamkn vggipallrl lrksvdgevk elvtgvlwnl sscdavkmti irdalstltn
      661 tvivphsgwn sssfdddhkm kfqtslvlrn ttgclrnlss ageearkqmr sceglvdsll
      721 yvihtcvnts dydsktvenc vctlrnlsyr lelevpqarl lginelddll gkespskdse
      781 pscwgkkkkk kkktsqedqw dgvgpipgfs kspkgvemlw hpsvvkpylt llaessnpat
      841 legsagslqn lsagnwkfaa yiraavrkek glpilvellr mdndrvvssv atalrnmald
      901 vrnkeligky amrdlvnrlp ggngpsilsd etvaaiccal hevtsknmen akaladtggi
      961 eklvnitkgr gdrsslkvvk aaaqvlntlw qyrdlrsiyk kdgwnqshfi tpvstlerer
     1021 fkshpslsta nqqmspvmqs vgstssspal lgireprsey drthpsmqyy ssqgdviahk
     1081 diytgsskas piyissyssp areqnrrlqh qqlyysqeds trknydayrl ylqsphsyed
     1141 pyfddrvhfp atsdyttqyg lksttnyvdf ystrrssyra eqypgspdsw v
//
LOCUS       XP_041321891            1190 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321891
VERSION     XP_041321891.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465957.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1190
                     /product="plakophilin-4 isoform X3"
                     /calculated_mol_wt=131081
     Region          166..>359
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          513..552
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          526..551
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(542,546,550,584,588,592,628,633,637)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          555..594
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          559..595
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          599..640
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          603..638
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          645..696
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          704..745
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          821..851
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          844..>965
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          861..896
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          863..895
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(886,890,894,932,936,940,978,982)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          902..943
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          949..984
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1190
                     /gene="PKP4"
                     /coded_by="XM_041465957.1:1..3573"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mpapeqspmv eeglpqtaqe tstgpgmepe ttattilasv keqelqfqrl treleverqi
       61 vanqlercrl gaespsiast ssteksfpwr ssdppptsvs kpqvsegvht naydirteae
      121 qgtlyspeqt slhersvgns rsstqmnsys dsgyqeissf hnsqnlnkae irqqhslggp
      181 lnshdvvrss raegqtsvqp santatnrvm rrvssvpsra qspsyavsts mspsrgslrt
      241 slgsgygsps vaeqrslpsh ayssttlpvq ragspygahr paspsavrrv gsltsrqanp
      301 gsgtapyqta grvgsplalt dvqtrvgsps qtqlgssspk rsgmtavpqh lgttlqrtih
      361 dmeqygqqyd iyermvpprp dsltglrssy asqhsqlgqe lrsavspdmh itpiyegrtf
      421 yspvyrspnh gtielhhgsq aalfrtgsgm gnlqrsssqr stltyqrnty glptaaalae
      481 plralpfrlp epgygrlhpd ggttrspsid sihkdprefa wrdpelpevi hmlqhqfpsv
      541 qanaaaylqh lcfgdnkvkt evcrlggikh lvdlldhrvl evqknacgal rnlvygkstd
      601 enkiamknvg gipallrllr ksvdgevkel vtgvlwnlss cdavkmtiir dalstltntv
      661 ivphsgwnss sfdddhkmkf qtslvlrntt gclrnlssag eearkqmrsc eglvdsllyv
      721 ihtcvntsdy dsktvencvc tlrnlsyrle levpqarllg inelddllgk espskdseps
      781 cwgkkkkkkk ktsqedqwdg vgpipgfsks pkgvemlwhp svvkpyltll aessnpatle
      841 gsagslqnls agnwkfaayi raavrkekgl pilvellrmd ndrvvssvat alrnmaldvr
      901 nkeligkyam rdlvnrlpgg ngpsilsdet vaaiccalhe vtsknmenak aladtggiek
      961 lvnitkgrgd rsslkvvkaa aqvlntlwqy rdlrsiykkd gwnqshfitp vstlererfk
     1021 shpslstanq qmspvmqsvg stssspallg ireprseydr thpsmqyyss qgdviahkdi
     1081 ytgsskaspi yissysspar eqnrrlqqhq qlyysqedst rknydayrly lqsphsyedp
     1141 yfddrvhfpa tsdyttqygl ksttnyvdfy strrssyrae qypgspdswv
//
LOCUS       XP_041321892            1148 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321892
VERSION     XP_041321892.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465958.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1148
                     /product="plakophilin-4 isoform X4"
                     /calculated_mol_wt=126403
     Region          124..>317
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          471..510
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          484..509
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(500,504,508,542,546,550,586,591,595)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          513..552
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          517..553
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          557..598
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          561..596
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          603..654
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          662..703
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          779..809
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          802..>923
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          819..854
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          821..853
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(844,848,852,890,894,898,936,940)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          860..901
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          907..942
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1148
                     /gene="PKP4"
                     /coded_by="XM_041465958.1:1..3447"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mpapeqspmv eeglpqtaqe tstgpgmepe ttattilasv keqelqfqrl treleverqi
       61 vanqlercrl gaespsiast ssteksfpwr ssgsvgnsrs stqmnsysds gyqeissfhn
      121 sqnlnkaeir qqhslggpln shdvvrssra egqtsvqpsa ntatnrvmrr vssvpsraqs
      181 psyavstsms psrgslrtsl gsgygspsva eqrslpshay ssttlpvqra gspygahrpa
      241 spsavrrvgs ltsrqanpgs gtapyqtagr vgsplaltdv qtrvgspsqt qlgssspkrs
      301 gmtavpqhlg ttlqrtihdm eqygqqydiy ermvpprpds ltglrssyas qhsqlgqelr
      361 savspdmhit piyegrtfys pvyrspnhgt ielhhgsqaa lfrtgsgmgn lqrsssqrst
      421 ltyqrntygl ptaaalaepl ralpfrlpep gygrlhpdgg ttrspsidsi hkdprefawr
      481 dpelpevihm lqhqfpsvqa naaaylqhlc fgdnkvktev crlggikhlv dlldhrvlev
      541 qknacgalrn lvygkstden kiamknvggi pallrllrks vdgevkelvt gvlwnlsscd
      601 avkmtiirda lstltntviv phsgwnsssf dddhkmkfqt slvlrnttgc lrnlssagee
      661 arkqmrsceg lvdsllyvih tcvntsdyds ktvencvctl rnlsyrlele vpqarllgin
      721 elddllgkes pskdsepscw gkkkkkkkkt sqedqwdgvg pipgfskspk gvemlwhpsv
      781 vkpyltllae ssnpatlegs agslqnlsag nwkfaayira avrkekglpi lvellrmdnd
      841 rvvssvatal rnmaldvrnk eligkyamrd lvnrlpggng psilsdetva aiccalhevt
      901 sknmenakal adtggieklv nitkgrgdrs slkvvkaaaq vlntlwqyrd lrsiykkdgw
      961 nqshfitpvs tlererfksh pslstanqqm spvmqsvgst ssspallgir eprseydrth
     1021 psmqyyssqg dviahkdiyt gsskaspiyi ssysspareq nrrlqqhqql yysqedstrk
     1081 nydayrlylq sphsyedpyf ddrvhfpats dyttqyglks ttnyvdfyst rrssyraeqy
     1141 pgspdswv
//
LOCUS       XP_041321893            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041321893
VERSION     XP_041321893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465959.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="plakophilin-4 isoform X5"
                     /calculated_mol_wt=115225
     Region          21..>214
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          368..407
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          381..406
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(397,401,405,439,443,447,483,488,492)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          410..449
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          414..450
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          454..495
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          458..493
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          500..551
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          559..600
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          676..706
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          699..>820
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          716..751
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          718..750
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(741,745,749,787,791,795,833,837)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          757..798
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          804..839
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1045
                     /gene="PKP4"
                     /coded_by="XM_041465959.1:335..3472"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mnsysdsgyq eissfhnsqn lnkaeirqqh slggplnshd vvrssraegq tsvqpsanta
       61 tnrvmrrvss vpsraqspsy avstsmspsr gslrtslgsg ygspsvaeqr slpshaysst
      121 tlpvqragsp ygahrpasps avrrvgslts rqanpgsgta pyqtagrvgs plaltdvqtr
      181 vgspsqtqlg ssspkrsgmt avpqhlgttl qrtihdmeqy gqqydiyerm vpprpdsltg
      241 lrssyasqhs qlgqelrsav spdmhitpiy egrtfyspvy rspnhgtiel hhgsqaalfr
      301 tgsgmgnlqr sssqrstlty qrntyglpta aalaeplral pfrlpepgyg rlhpdggttr
      361 spsidsihkd prefawrdpe lpevihmlqh qfpsvqanaa aylqhlcfgd nkvktevcrl
      421 ggikhlvdll dhrvlevqkn acgalrnlvy gkstdenkia mknvggipal lrllrksvdg
      481 evkelvtgvl wnlsscdavk mtiirdalst ltntvivphs gwnsssfddd hkmkfqtslv
      541 lrnttgclrn lssageeark qmrsceglvd sllyvihtcv ntsdydsktv encvctlrnl
      601 syrlelevpq arllgineld dllgkespsk dsepscwgkk kkkkkktsqe dqwdgvgpip
      661 gfskspkgve mlwhpsvvkp yltllaessn patlegsags lqnlsagnwk faayiraavr
      721 kekglpilve llrmdndrvv ssvatalrnm aldvrnkeli gkyamrdlvn rlpggngpsi
      781 lsdetvaaic calhevtskn menakaladt ggieklvnit kgrgdrsslk vvkaaaqvln
      841 tlwqyrdlrs iykkdgwnqs hfitpvstle rerfkshpsl stanqqmspv mqsvgstsss
      901 pallgirepr seydrthpsm qyyssqgdvi ahkdiytgss kaspiyissy sspareqnrr
      961 lqqhqqlyys qedstrknyd ayrlylqsph syedpyfddr vhfpatsdyt tqyglksttn
     1021 yvdfystrrs syraeqypgs pdswv
//
LOCUS       XP_041321895            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041321895
VERSION     XP_041321895.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465961.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="plakophilin-4 isoform X5"
                     /calculated_mol_wt=115225
     Region          21..>214
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          368..407
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          381..406
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(397,401,405,439,443,447,483,488,492)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          410..449
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          414..450
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          454..495
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          458..493
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          500..551
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          559..600
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          676..706
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          699..>820
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          716..751
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          718..750
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(741,745,749,787,791,795,833,837)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          757..798
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          804..839
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1045
                     /gene="PKP4"
                     /coded_by="XM_041465961.1:356..3493"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mnsysdsgyq eissfhnsqn lnkaeirqqh slggplnshd vvrssraegq tsvqpsanta
       61 tnrvmrrvss vpsraqspsy avstsmspsr gslrtslgsg ygspsvaeqr slpshaysst
      121 tlpvqragsp ygahrpasps avrrvgslts rqanpgsgta pyqtagrvgs plaltdvqtr
      181 vgspsqtqlg ssspkrsgmt avpqhlgttl qrtihdmeqy gqqydiyerm vpprpdsltg
      241 lrssyasqhs qlgqelrsav spdmhitpiy egrtfyspvy rspnhgtiel hhgsqaalfr
      301 tgsgmgnlqr sssqrstlty qrntyglpta aalaeplral pfrlpepgyg rlhpdggttr
      361 spsidsihkd prefawrdpe lpevihmlqh qfpsvqanaa aylqhlcfgd nkvktevcrl
      421 ggikhlvdll dhrvlevqkn acgalrnlvy gkstdenkia mknvggipal lrllrksvdg
      481 evkelvtgvl wnlsscdavk mtiirdalst ltntvivphs gwnsssfddd hkmkfqtslv
      541 lrnttgclrn lssageeark qmrsceglvd sllyvihtcv ntsdydsktv encvctlrnl
      601 syrlelevpq arllgineld dllgkespsk dsepscwgkk kkkkkktsqe dqwdgvgpip
      661 gfskspkgve mlwhpsvvkp yltllaessn patlegsags lqnlsagnwk faayiraavr
      721 kekglpilve llrmdndrvv ssvatalrnm aldvrnkeli gkyamrdlvn rlpggngpsi
      781 lsdetvaaic calhevtskn menakaladt ggieklvnit kgrgdrsslk vvkaaaqvln
      841 tlwqyrdlrs iykkdgwnqs hfitpvstle rerfkshpsl stanqqmspv mqsvgstsss
      901 pallgirepr seydrthpsm qyyssqgdvi ahkdiytgss kaspiyissy sspareqnrr
      961 lqqhqqlyys qedstrknyd ayrlylqsph syedpyfddr vhfpatsdyt tqyglksttn
     1021 yvdfystrrs syraeqypgs pdswv
//
LOCUS       XP_041321896            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041321896
VERSION     XP_041321896.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465962.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="plakophilin-4 isoform X5"
                     /calculated_mol_wt=115225
     Region          21..>214
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          368..407
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          381..406
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(397,401,405,439,443,447,483,488,492)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          410..449
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          414..450
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          454..495
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          458..493
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          500..551
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          559..600
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          676..706
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          699..>820
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          716..751
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          718..750
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(741,745,749,787,791,795,833,837)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          757..798
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          804..839
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1045
                     /gene="PKP4"
                     /coded_by="XM_041465962.1:203..3340"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mnsysdsgyq eissfhnsqn lnkaeirqqh slggplnshd vvrssraegq tsvqpsanta
       61 tnrvmrrvss vpsraqspsy avstsmspsr gslrtslgsg ygspsvaeqr slpshaysst
      121 tlpvqragsp ygahrpasps avrrvgslts rqanpgsgta pyqtagrvgs plaltdvqtr
      181 vgspsqtqlg ssspkrsgmt avpqhlgttl qrtihdmeqy gqqydiyerm vpprpdsltg
      241 lrssyasqhs qlgqelrsav spdmhitpiy egrtfyspvy rspnhgtiel hhgsqaalfr
      301 tgsgmgnlqr sssqrstlty qrntyglpta aalaeplral pfrlpepgyg rlhpdggttr
      361 spsidsihkd prefawrdpe lpevihmlqh qfpsvqanaa aylqhlcfgd nkvktevcrl
      421 ggikhlvdll dhrvlevqkn acgalrnlvy gkstdenkia mknvggipal lrllrksvdg
      481 evkelvtgvl wnlsscdavk mtiirdalst ltntvivphs gwnsssfddd hkmkfqtslv
      541 lrnttgclrn lssageeark qmrsceglvd sllyvihtcv ntsdydsktv encvctlrnl
      601 syrlelevpq arllgineld dllgkespsk dsepscwgkk kkkkkktsqe dqwdgvgpip
      661 gfskspkgve mlwhpsvvkp yltllaessn patlegsags lqnlsagnwk faayiraavr
      721 kekglpilve llrmdndrvv ssvatalrnm aldvrnkeli gkyamrdlvn rlpggngpsi
      781 lsdetvaaic calhevtskn menakaladt ggieklvnit kgrgdrsslk vvkaaaqvln
      841 tlwqyrdlrs iykkdgwnqs hfitpvstle rerfkshpsl stanqqmspv mqsvgstsss
      901 pallgirepr seydrthpsm qyyssqgdvi ahkdiytgss kaspiyissy sspareqnrr
      961 lqqhqqlyys qedstrknyd ayrlylqsph syedpyfddr vhfpatsdyt tqyglksttn
     1021 yvdfystrrs syraeqypgs pdswv
//
LOCUS       XP_041321897            1189 aa            linear   VRT 06-MAY-2021
DEFINITION  plakophilin-4 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321897
VERSION     XP_041321897.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465963.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1189
                     /product="plakophilin-4 isoform X6"
                     /calculated_mol_wt=130953
     Region          166..>359
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          513..552
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          526..551
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(542,546,550,584,588,592,628,633,637)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          555..594
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          559..595
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          599..640
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          603..638
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          645..696
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          704..745
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          821..851
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          844..>965
                     /region_name="PLN03200"
                     /note="cellulose synthase-interactive protein;
                     Provisional"
                     /db_xref="CDD:215629"
     Region          861..896
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          863..895
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(886,890,894,932,936,940,978,982)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          902..943
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          949..984
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..1189
                     /gene="PKP4"
                     /coded_by="XM_041465963.1:1..3570"
                     /db_xref="GeneID:121352759"
ORIGIN      
        1 mpapeqspmv eeglpqtaqe tstgpgmepe ttattilasv keqelqfqrl treleverqi
       61 vanqlercrl gaespsiast ssteksfpwr ssdppptsvs kpqvsegvht naydirteae
      121 qgtlyspeqt slhersvgns rsstqmnsys dsgyqeissf hnsqnlnkae irqqhslggp
      181 lnshdvvrss raegqtsvqp santatnrvm rrvssvpsra qspsyavsts mspsrgslrt
      241 slgsgygsps vaeqrslpsh ayssttlpvq ragspygahr paspsavrrv gsltsrqanp
      301 gsgtapyqta grvgsplalt dvqtrvgsps qtqlgssspk rsgmtavpqh lgttlqrtih
      361 dmeqygqqyd iyermvpprp dsltglrssy asqhsqlgqe lrsavspdmh itpiyegrtf
      421 yspvyrspnh gtielhhgsq aalfrtgsgm gnlqrsssqr stltyqrnty glptaaalae
      481 plralpfrlp epgygrlhpd ggttrspsid sihkdprefa wrdpelpevi hmlqhqfpsv
      541 qanaaaylqh lcfgdnkvkt evcrlggikh lvdlldhrvl evqknacgal rnlvygkstd
      601 enkiamknvg gipallrllr ksvdgevkel vtgvlwnlss cdavkmtiir dalstltntv
      661 ivphsgwnss sfdddhkmkf qtslvlrntt gclrnlssag eearkqmrsc eglvdsllyv
      721 ihtcvntsdy dsktvencvc tlrnlsyrle levpqarllg inelddllgk espskdseps
      781 cwgkkkkkkk ktsqedqwdg vgpipgfsks pkgvemlwhp svvkpyltll aessnpatle
      841 gsagslqnls agnwkfaayi raavrkekgl pilvellrmd ndrvvssvat alrnmaldvr
      901 nkeligkyam rdlvnrlpgg ngpsilsdet vaaiccalhe vtsknmenak aladtggiek
      961 lvnitkgrgd rsslkvvkaa aqvlntlwqy rdlrsiykkd gwnqshfitp vstlererfk
     1021 shpslstanq qmspvmqsvg stssspallg ireprseydr thpsmqyyss qgdviahkdi
     1081 ytgsskaspi yissysspar eqnrrlqhqq lyysqedstr knydayrlyl qsphsyedpy
     1141 fddrvhfpat sdyttqyglk sttnyvdfys trrssyraeq ypgspdswv
//
LOCUS       XP_041321898             799 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane channel-like protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041321898
VERSION     XP_041321898.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465964.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..799
                     /product="transmembrane channel-like protein 6"
                     /calculated_mol_wt=90545
     Region          557..663
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..799
                     /gene="TMC6"
                     /coded_by="XM_041465964.1:145..2544"
                     /db_xref="GeneID:121352760"
ORIGIN      
        1 msqppsitll vpegtesdgq epspdneral htsfhqlile qsslieagle levlerares
       61 paclatpeac amawpepgqg eehpsyssps lqilasmpsr tigrnlgaii sqycnrtarl
      121 rrrsgrpplq qlcraarpsl rhydldtdps ratleekrrl lvkellslsp sqcshmlltm
      181 plslvekril rrqlsgqrgp vrqrthhwap fspcgwskvf vslgcrgvwy rllsllraaq
      241 pghyalkqig grfgssvlsy flflktllml nffsffilla fvvvlqavyp tasvspqpfs
      301 glelltgagy fthsllyygy ysnvtlndpc tsspegsvcp lpapllpynl playlfsvgv
      361 sflvtcillv ysvsrsfres vgsstgdlai kvfcawdfkv iqrrsvklqc enictqlkel
      421 lgeqrsrsha qgrcqclrhc lvvllawlla lasvsgcvla vhyfsehmhv vqqelqaqgs
      481 grwqqeaill vlplvvslln almphlfnll amwerqdspv tevyvaiirn lilkmvilsl
      541 lcyhwlsrsi icsteecwet cvgqdlyrfv vmdfiftlld tlfgeliwrl ilkkrlktkq
      601 rpefdiarnv leliygqtlt wlgilfapll pavqmlklll lfyikktslm rncqspskpw
      661 qashmttvfi tllcfpsflg aaaflsytiw svqpsetcgp frgletiyks gkrwvlvlek
      721 snpnitwfaw vyqhllentc llffmsvali aviyfniqvv rgrqrvicll qeqianeged
      781 kvfliqklhs vyeqrhrrs
//
LOCUS       XP_041321899             756 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatocyte growth factor-regulated tyrosine kinase substrate
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321899
VERSION     XP_041321899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..756
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..756
                     /product="hepatocyte growth factor-regulated tyrosine
                     kinase substrate isoform X1"
                     /calculated_mol_wt=83884
     Region          6..143
                     /region_name="VHS_Hrs"
                     /note="VHS (Vps27/Hrs/STAM) domain of Hepatocyte growth
                     factor-regulated tyrosine kinase substrate, Hrs; cd03569"
                     /db_xref="CDD:340771"
     Site            order(25..26,29,33,73..74)
                     /site_type="other"
                     /note="FYVE domain interface [polypeptide binding]"
                     /db_xref="CDD:340771"
     Region          159..219
                     /region_name="FYVE_Hrs"
                     /note="FYVE domain found in hepatocyte growth factor
                     (HGF)-regulated tyrosine kinase substrate (Hrs) and
                     similar proteins; cd15720"
                     /db_xref="CDD:277260"
     Site            order(160,162,178..183,185..186,210..212)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277260"
     Region          <228..368
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     Region          386..481
                     /region_name="GAT_Hrs"
                     /note="non-canonical GAT domain found in metazoan
                     hepatocyte growth factor-regulated tyrosine kinase
                     substrate (Hrs) and similar proteins; cd21387"
                     /db_xref="CDD:410592"
     Site            order(389,393,396,399..400,403,407,413,419..420,423,
                     426..427,430,433..434,436..437,440..441,443..444,447,450,
                     453..454,456..457,460..461,464,467..468,471)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:410592"
     Region          <434..>539
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <435..693
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..756
                     /gene="HGS"
                     /coded_by="XM_041465965.1:92..2362"
                     /db_xref="GeneID:121352761"
ORIGIN      
        1 mgrgggtfer lldkatsqll letdwesilq icdmirqgdt qakyavnaik kkvndknphv
       61 alyalevmes vvkncgqtvh devankqtme elkeilkrqv etsvrskily liqawahafr
      121 nepkykvvqd tyqimkvegh vfpefkesda mfaaerapdw vdaeechrcr vqfgvvtrkh
      181 hcracgqifc gkcsskysti pkfgiekevr vcepcyehln kktegkaaat selppeylts
      241 plsqqsqlpp krdetalqee eelqlaials qseaeekerm rqkttysmyp kaeptpvtss
      301 appvstlysp pvnssaplae didpelaryl nrnywekkqe evrksptpsa plsltepavq
      361 pgeahpaplg vveqqyqnge seenheqflk alqnavttfv nrmksnhmrg rsitndsavl
      421 slfqsinnmh pqllellnql derrlyyegl qdklaqirda rgalnalree hqeklrraae
      481 eaerqrqiql aqkleimrqk kqeylemqrq laiqrlqeqe kerqlrleqq kqtiqmraqm
      541 pafslpyaql qampaaggvi yqpsgstsfp gtfspagsve gspmhsvymn qaaqggagpy
      601 aampgtdpsm vnaymyqpgt ssgqgpqqgp avptttpays syqptptqgy qtaasqsqsi
      661 paisqapqsg tmgymgsqsv smgyqpysmq glmsalpgqd talsslpaqq sylpgqqply
      721 qqvapaggpp qqqppaapap gqqppgsgea qlisfd
//
LOCUS       XP_041321900             755 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatocyte growth factor-regulated tyrosine kinase substrate
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321900
VERSION     XP_041321900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..755
                     /product="hepatocyte growth factor-regulated tyrosine
                     kinase substrate isoform X2"
                     /calculated_mol_wt=83756
     Region          6..143
                     /region_name="VHS_Hrs"
                     /note="VHS (Vps27/Hrs/STAM) domain of Hepatocyte growth
                     factor-regulated tyrosine kinase substrate, Hrs; cd03569"
                     /db_xref="CDD:340771"
     Site            order(25..26,29,33,73..74)
                     /site_type="other"
                     /note="FYVE domain interface [polypeptide binding]"
                     /db_xref="CDD:340771"
     Region          159..219
                     /region_name="FYVE_Hrs"
                     /note="FYVE domain found in hepatocyte growth factor
                     (HGF)-regulated tyrosine kinase substrate (Hrs) and
                     similar proteins; cd15720"
                     /db_xref="CDD:277260"
     Site            order(160,162,178..183,185..186,210..212)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277260"
     Region          <228..368
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     Region          385..480
                     /region_name="GAT_Hrs"
                     /note="non-canonical GAT domain found in metazoan
                     hepatocyte growth factor-regulated tyrosine kinase
                     substrate (Hrs) and similar proteins; cd21387"
                     /db_xref="CDD:410592"
     Site            order(388,392,395,398..399,402,406,412,418..419,422,
                     425..426,429,432..433,435..436,439..440,442..443,446,449,
                     452..453,455..456,459..460,463,466..467,470)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:410592"
     Region          <433..>538
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <434..692
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     CDS             1..755
                     /gene="HGS"
                     /coded_by="XM_041465966.1:92..2359"
                     /db_xref="GeneID:121352761"
ORIGIN      
        1 mgrgggtfer lldkatsqll letdwesilq icdmirqgdt qakyavnaik kkvndknphv
       61 alyalevmes vvkncgqtvh devankqtme elkeilkrqv etsvrskily liqawahafr
      121 nepkykvvqd tyqimkvegh vfpefkesda mfaaerapdw vdaeechrcr vqfgvvtrkh
      181 hcracgqifc gkcsskysti pkfgiekevr vcepcyehln kktegkaaat selppeylts
      241 plsqqsqlpp krdetalqee eelqlaials qseaeekerm rqkttysmyp kaeptpvtss
      301 appvstlysp pvnssaplae didpelaryl nrnywekkqe evrksptpsa plsltepavq
      361 pgeahpaplg vveqyqnges eenheqflka lqnavttfvn rmksnhmrgr sitndsavls
      421 lfqsinnmhp qllellnqld errlyyeglq dklaqirdar galnalreeh qeklrraaee
      481 aerqrqiqla qkleimrqkk qeylemqrql aiqrlqeqek erqlrleqqk qtiqmraqmp
      541 afslpyaqlq ampaaggviy qpsgstsfpg tfspagsveg spmhsvymnq aaqggagpya
      601 ampgtdpsmv naymyqpgts sgqgpqqgpa vptttpayss yqptptqgyq taasqsqsip
      661 aisqapqsgt mgymgsqsvs mgyqpysmqg lmsalpgqdt alsslpaqqs ylpgqqplyq
      721 qvapaggppq qqppaapapg qqppgsgeaq lisfd
//
LOCUS       XP_041321901             722 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321901
VERSION     XP_041321901.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465967.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..722
                     /product="glycerol-3-phosphate dehydrogenase,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=80266
     Region          1..594
                     /region_name="DAO"
                     /note="FAD dependent oxidoreductase; cl40741"
                     /db_xref="CDD:477422"
     Region          622..684
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(631,633,635,642,667,669,671,678)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..722
                     /gene="GPD2"
                     /coded_by="XM_041465967.1:252..2420"
                     /db_xref="GeneID:121352762"
ORIGIN      
        1 mafqkavkgt aligggaiat vfglsqfsqh rnkhgalvqv qaeegvprrk dhlpsreqql
       61 aalqssgefd vlvigggatg cgcaldaatr glktallerd dfssgtssrs tklihggvry
      121 lqkaimrldf eqyrmvkeal eerahllqsa phlsaalpim lpiykwwqlp yywmgiklyd
      181 lvagsqclks syvltkdral elfpmlrrdk lvgaivyydg qhndarmnla ialtaaryga
      241 atanytevrh llkstdtgrv cgvrcrdvlt gkefdvrakc vinatgpftd svrkmddqev
      301 pnicqpsagv hivmpgyysp dnmglldpat sdgrvifflp wekmtiagtt dsptdvtshp
      361 ipteedinfi lsevrnylgp dvevrrgdvl aawsgirplv tnpdskdtqs lsrnhvvtis
      421 dsglitiagg kwttyramar dtidaavrkh nlqagscrtm glqlegaqdw sptlyirlvq
      481 dyglesevaq hlastygdka fevakiaqvt gkrwpivgkr lvsefpyiea evvygvkeya
      541 rtavdiisrr trlaflnvqa adealprivd imakelnwse qkkkeeleta ktflyyemgy
      601 kvktdqltds seislvpsdi erykkrfrmf dkdkkgfiti ldvqrvlqsi svqmdentlh
      661 eilnevdlnk ngqvelnefl qlmsaiqkgr vsgsrlavlm ksaeenlrrr qaipvdrsgg
      721 gl
//
LOCUS       XP_041321902             722 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321902
VERSION     XP_041321902.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465968.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..722
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..722
                     /product="glycerol-3-phosphate dehydrogenase,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=80266
     Region          1..594
                     /region_name="DAO"
                     /note="FAD dependent oxidoreductase; cl40741"
                     /db_xref="CDD:477422"
     Region          622..684
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(631,633,635,642,667,669,671,678)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..722
                     /gene="GPD2"
                     /coded_by="XM_041465968.1:262..2430"
                     /db_xref="GeneID:121352762"
ORIGIN      
        1 mafqkavkgt aligggaiat vfglsqfsqh rnkhgalvqv qaeegvprrk dhlpsreqql
       61 aalqssgefd vlvigggatg cgcaldaatr glktallerd dfssgtssrs tklihggvry
      121 lqkaimrldf eqyrmvkeal eerahllqsa phlsaalpim lpiykwwqlp yywmgiklyd
      181 lvagsqclks syvltkdral elfpmlrrdk lvgaivyydg qhndarmnla ialtaaryga
      241 atanytevrh llkstdtgrv cgvrcrdvlt gkefdvrakc vinatgpftd svrkmddqev
      301 pnicqpsagv hivmpgyysp dnmglldpat sdgrvifflp wekmtiagtt dsptdvtshp
      361 ipteedinfi lsevrnylgp dvevrrgdvl aawsgirplv tnpdskdtqs lsrnhvvtis
      421 dsglitiagg kwttyramar dtidaavrkh nlqagscrtm glqlegaqdw sptlyirlvq
      481 dyglesevaq hlastygdka fevakiaqvt gkrwpivgkr lvsefpyiea evvygvkeya
      541 rtavdiisrr trlaflnvqa adealprivd imakelnwse qkkkeeleta ktflyyemgy
      601 kvktdqltds seislvpsdi erykkrfrmf dkdkkgfiti ldvqrvlqsi svqmdentlh
      661 eilnevdlnk ngqvelnefl qlmsaiqkgr vsgsrlavlm ksaeenlrrr qaipvdrsgg
      721 gl
//
LOCUS       XP_041321903             699 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate dehydrogenase, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321903
VERSION     XP_041321903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..699
                     /product="glycerol-3-phosphate dehydrogenase,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=77906
     Region          1..594
                     /region_name="DAO"
                     /note="FAD dependent oxidoreductase; cl40741"
                     /db_xref="CDD:477422"
     Region          622..682
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(631,633,635,642,667,669,671,678)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..699
                     /gene="GPD2"
                     /coded_by="XM_041465969.1:253..2352"
                     /db_xref="GeneID:121352762"
ORIGIN      
        1 mafqkavkgt aligggaiat vfglsqfsqh rnkhgalvqv qaeegvprrk dhlpsreqql
       61 aalqssgefd vlvigggatg cgcaldaatr glktallerd dfssgtssrs tklihggvry
      121 lqkaimrldf eqyrmvkeal eerahllqsa phlsaalpim lpiykwwqlp yywmgiklyd
      181 lvagsqclks syvltkdral elfpmlrrdk lvgaivyydg qhndarmnla ialtaaryga
      241 atanytevrh llkstdtgrv cgvrcrdvlt gkefdvrakc vinatgpftd svrkmddqev
      301 pnicqpsagv hivmpgyysp dnmglldpat sdgrvifflp wekmtiagtt dsptdvtshp
      361 ipteedinfi lsevrnylgp dvevrrgdvl aawsgirplv tnpdskdtqs lsrnhvvtis
      421 dsglitiagg kwttyramar dtidaavrkh nlqagscrtm glqlegaqdw sptlyirlvq
      481 dyglesevaq hlastygdka fevakiaqvt gkrwpivgkr lvsefpyiea evvygvkeya
      541 rtavdiisrr trlaflnvqa adealprivd imakelnwse qkkkeeleta ktflyyemgy
      601 kvktdqltds seislvpsdi erykkrfrmf dkdkkgfiti ldvqrvlqsi svqmdentlh
      661 eilnevdlnk ngqvelnefl qlptsmptaf nrtiqgmqr
//
LOCUS       XP_041321904             673 aa            linear   VRT 06-MAY-2021
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321904
VERSION     XP_041321904.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465970.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..673
                     /product="polypeptide N-acetylgalactosaminyltransferase 5"
                     /calculated_mol_wt=74129
     Region          <56..>164
                     /region_name="dnaA"
                     /note="chromosomal replication initiator protein DnaA;
                     cl42516"
                     /db_xref="CDD:455861"
     Region          230..531
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(234..236,238,267,296,299,303,319..321,403..404,
                     426..427,429,454,457,462)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(319,321,454)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          537..671
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(555..557,562,564,572..573)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467314"
     Site            order(591..592,600,602,610..611)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467314"
     Site            order(643..645,652,654,662..663)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467314"
     CDS             1..673
                     /gene="GALNT5"
                     /coded_by="XM_041465970.1:20..2041"
                     /db_xref="GeneID:121352764"
ORIGIN      
        1 mnlaspaapr rgphsagnat grrgkhkela gkssggahaa tatagatavg grnrtlgttp
       61 raaptvagtg qngqeqrrta pgadgtgqdg qeqrraaptv tgtgqdgleq retapgaagt
      121 gqdeqergga aptaagtgrd gqeqaggspg mhrvlsmdat lsprdprapg qfghpvvvpd
      181 dkqeeaksrw kegnfnvyls dlipvdraia dtrpagcseq qvhddlpsts iimcfvdevw
      241 stllrsvhsv lgrspphlve eiilvddfst keylkeqlda ymsrfpkvki lrlrerhgli
      301 rarlagaeva rgavltflds hvecnvgwle pllqrvrlrr tkvacpviev isdkdmsymt
      361 vdnfqrgift wpmnfgwrqi pqevieknki ketdiircpv magglfsidk kyfselgmyd
      421 pgldvwggen meisfkvwmc ggeieivpcs rvghifrndn pysfpkdrvr tvernlarva
      481 evwldeykel fyghayhllh savdvgdlsq qirlreqlrc ksfrwylenv ypdleaplvk
      541 asgllvnval agciavegts lafeecdvns thqkfnytwl rliqhgelcv apagvvgavg
      601 lrrcqgrsrs lawlhrslat vqpglthhlv sehrqlpqpa clevdpsyra lrvkgcdprn
      661 phqkwqfsry had
//
LOCUS       XP_041321905             670 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 45 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321905
VERSION     XP_041321905.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465971.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..670
                     /product="leucine-rich repeat-containing protein 45
                     isoform X1"
                     /calculated_mol_wt=75620
     Region          <28..>229
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          90..117
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          176..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          204..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <285..>557
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <554..>649
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..670
                     /gene="LRRC45"
                     /coded_by="XM_041465971.1:29..2041"
                     /db_xref="GeneID:121352765"
ORIGIN      
        1 merfgreyar lcaaagaapq eavlrglrep ggprgrldla aqslslptcs algrllpgaa
       61 pfaalalgdc glseegvrll lnglctnttv ksldlkgnnl rtmgaealgk llkqnksirs
      121 ltlewnslgm weegfsffcq glrannflqr ldlrnnqinh qgagelamal tqntslqeld
      181 lrwnnigllg grallnclhs nrtlkrlela gnnvpgdilk avehaldhnq dreailseaq
      241 nqvsilskev lslkdeknkq fmdfvdtvdk qkeerarsek msavrvsqlq ealdeqysim
      301 nslktklqmt eaalalseqk vhtlgellna mkqeqnsvae chlrelqqqk qegadregrl
      361 lhdlsaarek nlllrnqvde lerkckvqqd qlflvkqdlt nttaelklra veaeerleme
      421 krrckqsled meslrvkevd rmaqqmease rsmhdriqrl eairisldee lsqvkaaala
      481 ergraeeelv kvrsqarlee qqrlehleek lrlmtesrde aqncclkqke mvaeaqakak
      541 qlslcadglr rrlnelqqdl drkeeekvte vnklkvelqe qighldaert aqdglrekia
      601 alerqlkals snhrealldk egeislllek lrmkeaeisr mreeeaqras flqnaimayv
      661 qgsplgssrk
//
LOCUS       XP_041321907             669 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 45 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321907
VERSION     XP_041321907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465973.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..669
                     /product="leucine-rich repeat-containing protein 45
                     isoform X2"
                     /calculated_mol_wt=75491
     Region          <28..>229
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          90..117
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..144
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          148..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          176..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          204..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <285..>541
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          443..>662
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..669
                     /gene="LRRC45"
                     /coded_by="XM_041465973.1:30..2039"
                     /db_xref="GeneID:121352765"
ORIGIN      
        1 merfgreyar lcaaagaapq eavlrglrep ggprgrldla aqslslptcs algrllpgaa
       61 pfaalalgdc glseegvrll lnglctnttv ksldlkgnnl rtmgaealgk llkqnksirs
      121 ltlewnslgm weegfsffcq glrannflqr ldlrnnqinh qgagelamal tqntslqeld
      181 lrwnnigllg grallnclhs nrtlkrlela gnnvpgdilk avehaldhnq dreailseaq
      241 nqvsilskev lslkdeknkq fmdfvdtvdk qkeerarsek msavrvsqlq ealdeqysim
      301 nslktklqmt eaalalseqk vhtlgellna mkqeqnsvae chlrelqqqk qegadregrl
      361 lhdlsaarek nlllrnqvde lerkckvqqd qlflvkqdlt nttaelklra veaeerleme
      421 krrckqsled meslrvkevd rmaqqmease rsmhdriqrl eairisldee lsqvkaaala
      481 ergraeeelv kvrsqarlee qrlehleekl rlmtesrdea qncclkqkem vaeaqakakq
      541 lslcadglrr rlnelqqdld rkeeekvtev nklkvelqeq ighldaerta qdglrekiaa
      601 lerqlkalss nhrealldke geislllekl rmkeaeisrm reeeaqrasf lqnaimayvq
      661 gsplgssrk
//
LOCUS       XP_041321908             568 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 45 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321908
VERSION     XP_041321908.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465974.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="leucine-rich repeat-containing protein 45
                     isoform X3"
                     /calculated_mol_wt=65075
     Region          <2..>127
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          16..42
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          46..73
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          74..97
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          102..122
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <183..>455
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <452..>547
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..568
                     /gene="LRRC45"
                     /coded_by="XM_041465974.1:376..2082"
                     /db_xref="GeneID:121352765"
ORIGIN      
        1 mgaealgkll kqnksirslt lewnslgmwe egfsffcqgl rannflqrld lrnnqinhqg
       61 agelamaltq ntslqeldlr wnnigllggr allnclhsnr tlkrlelagn nvpgdilkav
      121 ehaldhnqdr eailseaqnq vsilskevls lkdeknkqfm dfvdtvdkqk eerarsekms
      181 avrvsqlqea ldeqysimns lktklqmtea alalseqkvh tlgellnamk qeqnsvaech
      241 lrelqqqkqe gadregrllh dlsaareknl llrnqvdele rkckvqqdql flvkqdltnt
      301 taelklrave aeerlemekr rckqsledme slrvkevdrm aqqmeasers mhdriqrlea
      361 irisldeels qvkaaalaer graeeelvkv rsqarleeqq rlehleeklr lmtesrdeaq
      421 ncclkqkemv aeaqakakql slcadglrrr lnelqqdldr keeekvtevn klkvelqeqi
      481 ghldaertaq dglrekiaal erqlkalssn hrealldkeg eisllleklr mkeaeisrmr
      541 eeeaqrasfl qnaimayvqg splgssrk
//
LOCUS       XP_041321909             471 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321909
VERSION     XP_041321909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="COP9 signalosome complex subunit 1 isoform X1"
                     /calculated_mol_wt=53433
     Region          107..289
                     /region_name="RPN7"
                     /note="26S proteasome subunit RPN7; pfam10602"
                     /db_xref="CDD:431387"
     Region          304..408
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..471
                     /gene="GPS1"
                     /coded_by="XM_041465975.1:188..1603"
                     /db_xref="GeneID:121352766"
ORIGIN      
        1 mqidvdpqed qqnspdinyv venptldleq yassysglmr ierlqfiadh cpqlrvealk
       61 malsfvqrtf nvdvyeeihr klseatrelq ntpdavpdsg iepppldtaw veatrkkall
      121 klekldtdlk nykgnsikes irrghddlgd hyldcgdlsn alkcysrard yctsakhvin
      181 mclnvikvsv ylqnwshvls yvskaestpe iaeqrgerds qtqailtklk caaglaelaa
      241 rkykqaakcf llasfdhcdf pellspsnva vygglcalat fdrqelqrnv issssfklfl
      301 elepqvrdii fkfyeskyas clkmldemkd nllldmylap hvrtlytqir nraliqyfsp
      361 yvsadmrkma tafnttvaal edeltqlile glinaridsh skilyardvd qrsttfeksl
      421 lmgkefqrra kamilraavl rnqihvkspp regsqgeltp ansqsrmstn m
//
LOCUS       XP_041321910             487 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321910
VERSION     XP_041321910.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465976.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..487
                     /product="COP9 signalosome complex subunit 1 isoform X2"
                     /calculated_mol_wt=55154
     Region          123..305
                     /region_name="RPN7"
                     /note="26S proteasome subunit RPN7; pfam10602"
                     /db_xref="CDD:431387"
     Region          320..424
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..487
                     /gene="GPS1"
                     /coded_by="XM_041465976.1:36..1499"
                     /db_xref="GeneID:121352766"
ORIGIN      
        1 mplpvqvfnl qgavepmqid vdpqedqqns pdinyvvenp tldleqyass ysglmrierl
       61 qfiadhcpql rvealkmals fvqrtfnvdv yeeihrklse atrelqntpd avpdsgiepp
      121 pldtawveat rkkallklek ldtdlknykg nsikesirrg hddlgdhyld cgdlsnalkc
      181 ysrardycts akhvinmcln vikvsvylqn wshvlsyvsk aestpeiaeq rgerdsqtqa
      241 iltklkcaag laelaarkyk qaakcfllas fdhcdfpell spsnvavygg lcalatfdrq
      301 elqrnvisss sfklflelep qvrdiifkfy eskyasclkm ldemkdnlll dmylaphvrt
      361 lytqirnral iqyfspyvsa dmrkmatafn ttvaaledel tqlileglin aridshskil
      421 yardvdqrst tfeksllmgk efqrrakami lraavlrnqi hvksppregs qgeltpansq
      481 srmstnm
//
LOCUS       XP_041321911             471 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321911
VERSION     XP_041321911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465977.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="COP9 signalosome complex subunit 1 isoform X1"
                     /calculated_mol_wt=53433
     Region          107..289
                     /region_name="RPN7"
                     /note="26S proteasome subunit RPN7; pfam10602"
                     /db_xref="CDD:431387"
     Region          304..408
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..471
                     /gene="GPS1"
                     /coded_by="XM_041465977.1:164..1579"
                     /db_xref="GeneID:121352766"
ORIGIN      
        1 mqidvdpqed qqnspdinyv venptldleq yassysglmr ierlqfiadh cpqlrvealk
       61 malsfvqrtf nvdvyeeihr klseatrelq ntpdavpdsg iepppldtaw veatrkkall
      121 klekldtdlk nykgnsikes irrghddlgd hyldcgdlsn alkcysrard yctsakhvin
      181 mclnvikvsv ylqnwshvls yvskaestpe iaeqrgerds qtqailtklk caaglaelaa
      241 rkykqaakcf llasfdhcdf pellspsnva vygglcalat fdrqelqrnv issssfklfl
      301 elepqvrdii fkfyeskyas clkmldemkd nllldmylap hvrtlytqir nraliqyfsp
      361 yvsadmrkma tafnttvaal edeltqlile glinaridsh skilyardvd qrsttfeksl
      421 lmgkefqrra kamilraavl rnqihvkspp regsqgeltp ansqsrmstn m
//
LOCUS       XP_041321912             471 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321912
VERSION     XP_041321912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465978.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="COP9 signalosome complex subunit 1 isoform X1"
                     /calculated_mol_wt=53433
     Region          107..289
                     /region_name="RPN7"
                     /note="26S proteasome subunit RPN7; pfam10602"
                     /db_xref="CDD:431387"
     Region          304..408
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..471
                     /gene="GPS1"
                     /coded_by="XM_041465978.1:141..1556"
                     /db_xref="GeneID:121352766"
ORIGIN      
        1 mqidvdpqed qqnspdinyv venptldleq yassysglmr ierlqfiadh cpqlrvealk
       61 malsfvqrtf nvdvyeeihr klseatrelq ntpdavpdsg iepppldtaw veatrkkall
      121 klekldtdlk nykgnsikes irrghddlgd hyldcgdlsn alkcysrard yctsakhvin
      181 mclnvikvsv ylqnwshvls yvskaestpe iaeqrgerds qtqailtklk caaglaelaa
      241 rkykqaakcf llasfdhcdf pellspsnva vygglcalat fdrqelqrnv issssfklfl
      301 elepqvrdii fkfyeskyas clkmldemkd nllldmylap hvrtlytqir nraliqyfsp
      361 yvsadmrkma tafnttvaal edeltqlile glinaridsh skilyardvd qrsttfeksl
      421 lmgkefqrra kamilraavl rnqihvkspp regsqgeltp ansqsrmstn m
//
LOCUS       XP_041321913             540 aa            linear   VRT 06-MAY-2021
DEFINITION  glucagon receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041321913
VERSION     XP_041321913.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465979.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..540
                     /product="glucagon receptor"
                     /calculated_mol_wt=61663
     Region          93..162
                     /region_name="HRM"
                     /note="Hormone receptor domain; pfam02793"
                     /db_xref="CDD:397086"
     Region          174..454
                     /region_name="7tmB1_GCGR"
                     /note="glucagon receptor, member of the class B family of
                     seven-transmembrane G protein-coupled receptors; cd15267"
                     /db_xref="CDD:320395"
     Site            order(177,183,187,225,229,232..233,236,262,268..269,272,
                     276,332..333,340..341,343..345,399,402,419..420,423)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320395"
     Region          178..203
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320395"
     Site            order(206,215,286,289..291,366,369,387..388,391,394,
                     436..437,440..441,443,447,450,454)
                     /site_type="other"
                     /note="putative G protein interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:320395"
     Region          212..234
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320395"
     Region          262..289
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320395"
     Region          301..321
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320395"
     Region          337..366
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320395"
     Site            order(366,382..383,385..387,389..390,436,440..442)
                     /site_type="other"
                     /note="allosteric modulator binding site [chemical
                     binding]"
                     /db_xref="CDD:320395"
     Region          382..407
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320395"
     Region          416..441
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320395"
     CDS             1..540
                     /gene="GCGR"
                     /coded_by="XM_041465979.1:753..2375"
                     /db_xref="GeneID:121352767"
ORIGIN      
        1 mtrrlaqgcp haravttrve kllrasrkpc alrcvpcmws rggmsqprll tllvlllccq
       61 gpsaqitdyv vekwkeysee cqrnmsrlpa ptelvcnrtf dkfscwpdtm pnstasvpcp
      121 wflpwyqkvk hrhvfktcgp dgqwvtgprg qslrdatqce qddedlkaqe kfaktygsfk
      181 vmytvgysvs lcalllalal llgfsklhcm rnyihmnlfa sfilkgvsvl vidallkthy
      241 sdkidgynvq vwlsdeaaag craatvfmqy givanycwll vegiylhnll vvavfsersy
      301 ftlylcigwg apmlflipwv ivkflyeniq cwstnnnmgf wwilrfpvfl ailinffifi
      361 riiqilvskl rahqmrytdy kfrlarstlt lipllgihev vfafitdeha qgtlryvklf
      421 fdlflssfqg llvailycfv nkevqaellk rwqrwklgkd laeeykhtys hapsarngag
      481 stcekhqlvs gctnglgrsl apqpssqrle rsgrsaaehl algghhhcye fpettaeshf
//
LOCUS       XP_041321914             605 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 148 [Pyrgilauda ruficollis].
ACCESSION   XP_041321914
VERSION     XP_041321914.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465980.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..605
                     /product="coiled-coil domain-containing protein 148"
                     /calculated_mol_wt=70903
     Region          <312..>542
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..605
                     /gene="CCDC148"
                     /coded_by="XM_041465980.1:1..1818"
                     /db_xref="GeneID:121352768"
ORIGIN      
        1 mgeldhgtlf sahrisggdn lavparnalc sqkykpvdyk hlyeiaaeak masaqiqlki
       61 kkaeqlskis kaqmllkqhr qvwwqeykrl sesrqkaeee mktfldeesh knnffldlre
      121 leqklseewd tyqanalvpv wqlkedlklk lsqvqrylsk escqkpkins aevlqqikfm
      181 knqqkavleg lileslaler eleehkenal vhsseekngl flevppelqs lecpypdlka
      241 lviqqyqela sghwaklrev eqqlealsrn sdwkeedqwv frtvinqyps dlqrrrtlyl
      301 dvlqrylphk srqelvahek aldhchsirn qhrvllsawa qlrkafvlra mataaeaaaa
      361 heaevvlads rqkqleicad lrakvlqwka qqeeaaklea avaarrkeke dererlqreq
      421 etirraqdke klkkywaeke lkwqeqeerd lqqleelrkl maeqaakdre rvrfrralle
      481 krllqkkela lrqarqeeek ekrlealrqq vavvakldpa ravadtvask armgigande
      541 felqqplfrl htyreeqvis dprlrvelal reaglhktly arevlsklpp lklprrdmes
      601 tafkm
//
LOCUS       XP_041321915             516 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321915
VERSION     XP_041321915.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465981.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..516
                     /product="tRNA-dihydrouridine(16/17) synthase
                     [NAD(P)(+)]-like isoform X1"
                     /calculated_mol_wt=58625
     Region          19..250
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(22..24,48,79,105,147,175,208,210,232..233)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(79,108..109,147,149,174..175,177..178,209..210,233)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(108,149,175,177)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(109,147,174,178,209..210)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Region          434..>468
                     /region_name="DUF702"
                     /note="Domain of unknown function (DUF702); pfam05142"
                     /db_xref="CDD:461560"
     CDS             1..516
                     /gene="DUS1L"
                     /coded_by="XM_041465981.1:134..1684"
                     /db_xref="GeneID:121352769"
ORIGIN      
        1 mpklrgeafw retlrsahyv vapmvdqsel awrllsrrhg aqlcytpmlh aqvflrdany
       61 rrenlydeac pedrplivqf candpevfvq aallaqdycd aidlnlgcpq miakrghyga
      121 flqeewdllq rmillanekl svpitckirv fpdidktvky aqmlekagcq lltvhgrtke
      181 qkgplagvas wehiqavrka vnipvfangn iqclsdveec irktgvhgvm saegnlhnpa
      241 lfegrnplvw emaeeyleiv rkypcplsyv rahlfklwhh tlqvyhqlre elakvktleg
      301 ivdvnrelkl rcqvprwapi sqnstactww ectkktdcns mlqeeianqk egekpkeglp
      361 ffhwicqpyi rpgpkercre ngdsgtekgv rgkraleeee dgnsellskn kqkkklrnpn
      421 ksfdpslkpk yakcdqcgnp kgtkcvfnmc rgcckkrafk evadcpghgl lfktkyeksl
      481 swqhsqrgiq tpeisqggda evgetavlke agdstg
//
LOCUS       XP_041321916             510 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321916
VERSION     XP_041321916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465982.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="tRNA-dihydrouridine(16/17) synthase
                     [NAD(P)(+)]-like isoform X2"
                     /calculated_mol_wt=56227
     Region          <4..>126
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <125..244
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(141,168,172,203..204)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Region          428..>462
                     /region_name="DUF702"
                     /note="Domain of unknown function (DUF702); pfam05142"
                     /db_xref="CDD:461560"
     CDS             1..510
                     /gene="DUS1L"
                     /coded_by="XM_041465982.1:27..1559"
                     /db_xref="GeneID:121352769"
ORIGIN      
        1 mavapsgcga arpgrsgrrs lrasgreprd ggagrqqpqr ctaeqagdae aargsllegd
       61 aaerplrgga hggperagle aaeppprrpa llhtdaarpg lpqgrqlppr eplrrglsrg
      121 ppahravlla neklsvpitc kirvfpdidk tvkyaqmlek agcqlltvhg rtkeqkgpla
      181 gvaswehiqa vrkavnipvf angniqclsd veecirktgv hgvmsaegnl hnpalfegrn
      241 plvwemaeey leivrkypcp lsyvrahlfk lwhhtlqvyh qlreelakvk tlegivdvnr
      301 elklrcqvpr wapisqnsta ctwwectkkt dcnsmlqeei anqkegekpk eglpffhwic
      361 qpyirpgpke rcrengdsgt ekgvrgkral eeeedgnsel lsknkqkkkl rnpnksfdps
      421 lkpkyakcdq cgnpkgtkcv fnmcrgcckk rafkevadcp ghgllfktky ekslswqhsq
      481 rgiqtpeisq ggdaevgeta vlkeagdstg
//
LOCUS       XP_041321917             486 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321917
VERSION     XP_041321917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465983.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="tRNA-dihydrouridine(16/17) synthase
                     [NAD(P)(+)]-like isoform X3"
                     /calculated_mol_wt=55157
     Region          19..250
                     /region_name="DUS_like_FMN"
                     /note="Dihydrouridine synthase-like (DUS-like) FMN-binding
                     domain. Members of this family catalyze the reduction of
                     the 5,6-double bond of a uridine residue on tRNA.
                     Dihydrouridine modification of tRNA is widely observed in
                     prokaryotes and eukaryotes, and also...; cd02801"
                     /db_xref="CDD:239200"
     Site            order(22..24,48,79,105,147,175,208,210,232..233)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Site            order(79,108..109,147,149,174..175,177..178,209..210,233)
                     /site_type="active"
                     /db_xref="CDD:239200"
     Site            order(108,149,175,177)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239200"
     Site            order(109,147,174,178,209..210)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239200"
     Region          404..>438
                     /region_name="DUF702"
                     /note="Domain of unknown function (DUF702); pfam05142"
                     /db_xref="CDD:461560"
     CDS             1..486
                     /gene="DUS1L"
                     /coded_by="XM_041465983.1:134..1594"
                     /db_xref="GeneID:121352769"
ORIGIN      
        1 mpklrgeafw retlrsahyv vapmvdqsel awrllsrrhg aqlcytpmlh aqvflrdany
       61 rrenlydeac pedrplivqf candpevfvq aallaqdycd aidlnlgcpq miakrghyga
      121 flqeewdllq rmillanekl svpitckirv fpdidktvky aqmlekagcq lltvhgrtke
      181 qkgplagvas wehiqavrka vnipvfangn iqclsdveec irktgvhgvm saegnlhnpa
      241 lfegrnplvw emaeeyleiv rkypcplsyv rahlfklwhh tlqvyhqlre elakvktleg
      301 ivdvnrelkl rcqeeianqk egekpkeglp ffhwicqpyi rpgpkercre ngdsgtekgv
      361 rgkraleeee dgnsellskn kqkkklrnpn ksfdpslkpk yakcdqcgnp kgtkcvfnmc
      421 rgcckkrafk evadcpghgl lfktkyeksl swqhsqrgiq tpeisqggda evgetavlke
      481 agdstg
//
LOCUS       XP_041321918             514 aa            linear   VRT 06-MAY-2021
DEFINITION  protein disulfide-isomerase [Pyrgilauda ruficollis].
ACCESSION   XP_041321918
VERSION     XP_041321918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465984.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..514
                     /product="protein disulfide-isomerase"
                     /calculated_mol_wt=57105
     Region          28..478
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..514
                     /gene="P4HB"
                     /coded_by="XM_041465984.1:59..1603"
                     /db_xref="GeneID:121352771"
ORIGIN      
        1 maavrallpl lcialllpar aaaqeeedgv lvlratsfeq alaehryllv efyapwcghc
       61 kalapeyaka aaklkaegse irlakvdate eselaqqfgv rgyptikffk ngdkaapkey
      121 tagreaddiv swlkkrtgpa aatladvaaa ealvdssevv vigffkdsts eaakefllaa
      181 eavddipfgi sssadvftky qiskdgvilf kkfdegqnnf egdltkdnll nfiksnslpl
      241 viefteqtap kifggeikth illflpksvs dyqgkldnfk saagnfkgki lfifidsdhs
      301 dnqrileffg lkkeecpavr litleeemtk ykpesnelta dkikefcnkf lagqikphlm
      361 sqdlpedwdk qpvkvlvgkn feevafdenk nvfvefyapw cghckqlapi wdklgetyrd
      421 heniviakmd staneveavk ihsfptlkff pagsgrnvid yngertlegf kkflesggqd
      481 gaaadddled lemdeetele egdedeqklq kdel
//
LOCUS       XP_041321920             493 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoleoyl-protein carboxylesterase NOTUM isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321920
VERSION     XP_041321920.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465986.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="palmitoleoyl-protein carboxylesterase NOTUM
                     isoform X1"
                     /calculated_mol_wt=54998
     Region          78..414
                     /region_name="PAE"
                     /note="Pectinacetylesterase; pfam03283"
                     /db_xref="CDD:460874"
     CDS             1..493
                     /gene="NOTUM"
                     /coded_by="XM_041465986.1:3..1484"
                     /db_xref="GeneID:121352772"
ORIGIN      
        1 mgtaalhlll llgllhagpg gegrkgwrrr gpavrergea aaaaaaesfp ldftavegnm
       61 dsfmaqvksl aqslypcsaq alphdlrlhl lhnasvtcnd gspagyylke skgsrrwllf
      121 leggwycfnr encdtrydtm rrlmssrewp atrvgtgils sqpeenphww nanmvfipyc
      181 ssdvwsgass ksekneyafm galiiqevik elvgkglsta kvlllagssa ggtgvllnvd
      241 rvaeqleemg yqgiqvrgla dsgwfldnkq yrrtdcidti tcapteairr girywngivp
      301 ercklqfkeg eewncffgyk iyptlrcpvf vvqwlfdeaq ltvdnvhltg qpvqegqwly
      361 iqnlgrelrn tlkdvtasfa paclsheiit rnhwtdiqvk gtslpralhc wdrslhesnk
      421 ngkaplkgcp ihlidscpwp hcnpscptir dqftgqemnv iqflmhmgfd vqkmaqqqgl
      481 epskllgmls sgn
//
LOCUS       XP_041321921             493 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoleoyl-protein carboxylesterase NOTUM isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321921
VERSION     XP_041321921.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465987.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="palmitoleoyl-protein carboxylesterase NOTUM
                     isoform X2"
                     /calculated_mol_wt=54998
     Region          78..414
                     /region_name="PAE"
                     /note="Pectinacetylesterase; pfam03283"
                     /db_xref="CDD:460874"
     CDS             1..493
                     /gene="NOTUM"
                     /coded_by="XM_041465987.1:3..1484"
                     /db_xref="GeneID:121352772"
ORIGIN      
        1 mgtaalhlll llgllhagpg gegrkgwrrr gpavrergea aaaaaaesfp ldftavegnm
       61 dsfmaqvksl aqslypcsaq alphdlrlhl lhnasvtcnd gspagyylke skgsrrwllf
      121 leggwycfnr encdtrydtm rrlmssrewp atrvgtgils sqpeenphww nanmvfipyc
      181 ssdvwsgass ksekneyafm galiiqevik elvgkglsta kvlllagssa ggtgvllnvd
      241 rvaeqleemg yqgiqvrgla dsgwfldnkq yrrtdcidti tcapteairr girywngivp
      301 ercklqfkeg eewncffgyk iyptlrcpvf vvqwlfdeaq ltvdnvhltg qpvqegqwly
      361 iqnlgrelrn tlkdvtasfa paclsheiit rnhwtdiqvk gtslpralhc wdrslhesnk
      421 ngkaplkgcp ihlidscpwp hcnpscptir dqftgqemnv iqflmhmgfd vqkmaqqqgl
      481 epskllgmls sgn
//
LOCUS       XP_041321922             354 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoleoyl-protein carboxylesterase NOTUM isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321922
VERSION     XP_041321922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465988.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..354
                     /product="palmitoleoyl-protein carboxylesterase NOTUM
                     isoform X3"
                     /calculated_mol_wt=39820
     Region          3..275
                     /region_name="PAE"
                     /note="Pectinacetylesterase; pfam03283"
                     /db_xref="CDD:460874"
     CDS             1..354
                     /gene="NOTUM"
                     /coded_by="XM_041465988.1:196..1260"
                     /db_xref="GeneID:121352772"
ORIGIN      
        1 mrrlmssrew patrvgtgil ssqpeenphw wnanmvfipy cssdvwsgas sksekneyaf
       61 mgaliiqevi kelvgkglst akvlllagss aggtgvllnv drvaeqleem gyqgiqvrgl
      121 adsgwfldnk qyrrtdcidt itcapteair rgirywngiv percklqfke geewncffgy
      181 kiyptlrcpv fvvqwlfdea qltvdnvhlt gqpvqegqwl yiqnlgrelr ntlkdvtasf
      241 apaclsheii trnhwtdiqv kgtslpralh cwdrslhesn kngkaplkgc pihlidscpw
      301 phcnpscpti rdqftgqemn viqflmhmgf dvqkmaqqqg lepskllgml ssgn
//
LOCUS       XP_041321923             473 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321923
VERSION     XP_041321923.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465989.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="monocarboxylate transporter 4"
                     /calculated_mol_wt=50868
     Region          21..410
                     /region_name="MFS_MCT3_4"
                     /note="Monocarboxylate transporters 9 and 14, and similar
                     proteins of the Major Facilitator Superfamily of
                     transporters; cd17430"
                     /db_xref="CDD:340988"
     Site            order(32..33,36..37,40,75,126..127,129..131,134,153,
                     156..157,160,239,242..243,246..248,251,278,282,335..336,
                     340,344,360,363..364,367..368,371)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340988"
     CDS             1..473
                     /gene="SLC16A3"
                     /coded_by="XM_041465989.1:184..1605"
                     /db_xref="GeneID:121352773"
ORIGIN      
        1 mgavvaddgp sgvkapdggw gwavlfgcfi itgfsyafpk avsvffkeli refgigysdt
       61 awissillam lygtgplcsv cvnrfgcrpv mlvgglfasm gmviasfcts ivqiyltagv
      121 itglglalnf qpslimlnry fdkrrplang lsaagspvfl calsplgqil qheygwrggf
      181 lilggmllnc cvcgalmrpl eppkkaeatk epaekkvkkk lldfsvfkdg gfviytlaas
      241 imvlglfvpp vfvvsyakdl gyqdtkaafl ltilgfidif arpicgmvag lkwvrprcvy
      301 lfsfamifng ftdlmgsmsv dygglvvfci ffgisygmvg alqfevlmai vgtqkfssai
      361 glvllaeava vligppsagk lldatgrymf vfiiagievt tsalvlalgn ffcikkksee
      421 phtkeeaaer eelnksenkt pedakvdsie veqflkdepe kngevvtnpe tcv
//
LOCUS       XP_041321924             468 aa            linear   VRT 06-MAY-2021
DEFINITION  tether containing UBX domain for GLUT4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321924
VERSION     XP_041321924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465990.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="tether containing UBX domain for GLUT4 isoform
                     X1"
                     /calculated_mol_wt=51392
     Region          12..93
                     /region_name="UBX1_UBXN9"
                     /note="Ubiquitin regulatory domain X (UBX) 1 found in UBX
                     domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar
                     proteins; cd17075"
                     /db_xref="CDD:340595"
     Region          305..378
                     /region_name="UBX2_UBXN9"
                     /note="Ubiquitin regulatory domain X (UBX) 2 found in UBX
                     domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar
                     proteins; cd16118"
                     /db_xref="CDD:340535"
     Site            order(306,308,310..311,314..315,317,349..350,352,370..373,
                     375,377)
                     /site_type="other"
                     /note="putative UBX-p97 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:340535"
     CDS             1..468
                     /gene="ASPSCR1"
                     /coded_by="XM_041465990.1:205..1611"
                     /db_xref="GeneID:121352774"
ORIGIN      
        1 mvpvssraga gttvrialql ddgsrlqdtf lcqqtlwell nhfakirelm eqdgelspvc
       61 iymrdeisgk dalekttlks lgliggnaii rvvmkkwsss ggeevvgatv pcseptvrpg
      121 smeeavdvpl pqantfpkdl ehrdvavsln scthkqdsik dshasleelc hspepeptpf
      181 vpvfgdgehp gdslvavpps klpttfsspg gpskpkkskn sqelqkeqeq lvereplich
      241 ldlleqlpdg peelpdeffe vtvddvrkrl aqlqnerkrl eeaplmtksl kesqlkekle
      301 rypkvvvrvr fpdrhvlqgf fhptetvgvl rdfvrshlad aelpfylfva ppriilndes
      361 ltlfeaklfp tavvhfgsee rracylksdl lssavspsaa dllvarslvp sasstlasva
      421 pslsepevgs dketieqpea astqgapqvf rkapgkipkw lklpggkr
//
LOCUS       XP_041321925             382 aa            linear   VRT 06-MAY-2021
DEFINITION  tether containing UBX domain for GLUT4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321925
VERSION     XP_041321925.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465991.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="tether containing UBX domain for GLUT4 isoform
                     X2"
                     /calculated_mol_wt=42479
     Region          12..93
                     /region_name="UBX1_UBXN9"
                     /note="Ubiquitin regulatory domain X (UBX) 1 found in UBX
                     domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar
                     proteins; cd17075"
                     /db_xref="CDD:340595"
     Region          <222..>301
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          305..>352
                     /region_name="UBX2_UBXN9"
                     /note="Ubiquitin regulatory domain X (UBX) 2 found in UBX
                     domain protein 9 (UBXN9, UBXD9, or ASPSCR1) and similar
                     proteins; cd16118"
                     /db_xref="CDD:340535"
     CDS             1..382
                     /gene="ASPSCR1"
                     /coded_by="XM_041465991.1:205..1353"
                     /db_xref="GeneID:121352774"
ORIGIN      
        1 mvpvssraga gttvrialql ddgsrlqdtf lcqqtlwell nhfakirelm eqdgelspvc
       61 iymrdeisgk dalekttlks lgliggnaii rvvmkkwsss ggeevvgatv pcseptvrpg
      121 smeeavdvpl pqantfpkdl ehrdvavsln scthkqdsik dshasleelc hspepeptpf
      181 vpvfgdgehp gdslvavpps klpttfsspg gpskpkkskn sqelqkeqeq lvereplich
      241 ldlleqlpdg peelpdeffe vtvddvrkrl aqlqnerkrl eeaplmtksl kesqlkekle
      301 rypkvvvrvr fpdrhvlqgf fhptetvgvl rdfvrshlad aelpfylcqt fpncccsfwi
      361 rgaqgllpei rpaelcsfsf cs
//
LOCUS       XP_041321926             468 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 57 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321926
VERSION     XP_041321926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465992.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="coiled-coil domain-containing protein 57 isoform
                     X1"
                     /calculated_mol_wt=52352
     CDS             1..468
                     /gene="CCDC57"
                     /coded_by="XM_041465992.1:169..1575"
                     /db_xref="GeneID:121352775"
ORIGIN      
        1 mngflrlrsk qqlslaagqe rilkqskmqa elnwqqlcen aecnwyqkse dpihslsssr
       61 eeifqhgdes slckyipale ikklqeqnas lraaiaqmrk emesldeqml sslpqtedrq
      121 laeqgslstn kistgttlsn ikvsstkldc ivnpdteegp epkvleenmv afgqqlpdvg
      181 tgvgcqysvk htlrgmqnkl keaarkisil nqekrqliem gnrlraelgm vlkkgvwhpv
      241 sskhctvcia sdsllprelv ertqcqlsvl khlqhrlttq elqctrqehp srfssltacp
      301 slkeeeapss cgeetelpsn evwidfsien hgpdtfsatk adtstkivqt qllsqspshv
      361 qqvqlsssrp htfcqildtg sslsllsprk nssqgefevv hsikqseesq qnvktkdkle
      421 tsaedltvkg trlevqqklk srslscahll kpkisssmak irnynikd
//
LOCUS       XP_041321927             441 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 57 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321927
VERSION     XP_041321927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="coiled-coil domain-containing protein 57 isoform
                     X2"
                     /calculated_mol_wt=49268
     CDS             1..441
                     /gene="CCDC57"
                     /coded_by="XM_041465993.1:309..1634"
                     /db_xref="GeneID:121352775"
ORIGIN      
        1 mqaelnwqql cenaecnwyq ksedpihsls ssreeifqhg desslckyip aleikklqeq
       61 naslraaiaq mrkemeslde qmlsslpqte drqlaeqgsl stnkistgtt lsnikvsstk
      121 ldcivnpdte egpepkvlee nmvafgqqlp dvgtgvgcqy svkhtlrgmq nklkeaarki
      181 silnqekrql iemgnrlrae lgmvlkkgvw hpvsskhctv ciasdsllpr elvertqcql
      241 svlkhlqhrl ttqelqctrq ehpsrfsslt acpslkeeea psscgeetel psnevwidfs
      301 ienhgpdtfs atkadtstki vqtqllsqsp shvqqvqlss srphtfcqil dtgsslslls
      361 prknssqgef evvhsikqse esqqnvktkd kletsaedlt vkgtrlevqq klksrslsca
      421 hllkpkisss makirnynik d
//
LOCUS       XP_041321928             441 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 57 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321928
VERSION     XP_041321928.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465994.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="coiled-coil domain-containing protein 57 isoform
                     X2"
                     /calculated_mol_wt=49268
     CDS             1..441
                     /gene="CCDC57"
                     /coded_by="XM_041465994.1:416..1741"
                     /db_xref="GeneID:121352775"
ORIGIN      
        1 mqaelnwqql cenaecnwyq ksedpihsls ssreeifqhg desslckyip aleikklqeq
       61 naslraaiaq mrkemeslde qmlsslpqte drqlaeqgsl stnkistgtt lsnikvsstk
      121 ldcivnpdte egpepkvlee nmvafgqqlp dvgtgvgcqy svkhtlrgmq nklkeaarki
      181 silnqekrql iemgnrlrae lgmvlkkgvw hpvsskhctv ciasdsllpr elvertqcql
      241 svlkhlqhrl ttqelqctrq ehpsrfsslt acpslkeeea psscgeetel psnevwidfs
      301 ienhgpdtfs atkadtstki vqtqllsqsp shvqqvqlss srphtfcqil dtgsslslls
      361 prknssqgef evvhsikqse esqqnvktkd kletsaedlt vkgtrlevqq klksrslsca
      421 hllkpkisss makirnynik d
//
LOCUS       XP_041321929             371 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 57 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321929
VERSION     XP_041321929.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465995.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="coiled-coil domain-containing protein 57 isoform
                     X3"
                     /calculated_mol_wt=41205
     CDS             1..371
                     /gene="CCDC57"
                     /coded_by="XM_041465995.1:594..1709"
                     /db_xref="GeneID:121352775"
ORIGIN      
        1 mrkemeslde qmlsslpqte drqlaeqgsl stnkistgtt lsnikvsstk ldcivnpdte
       61 egpepkvlee nmvafgqqlp dvgtgvgcqy svkhtlrgmq nklkeaarki silnqekrql
      121 iemgnrlrae lgmvlkkgvw hpvsskhctv ciasdsllpr elvertqcql svlkhlqhrl
      181 ttqelqctrq ehpsrfsslt acpslkeeea psscgeetel psnevwidfs ienhgpdtfs
      241 atkadtstki vqtqllsqsp shvqqvqlss srphtfcqil dtgsslslls prknssqgef
      301 evvhsikqse esqqnvktkd kletsaedlt vkgtrlevqq klksrslsca hllkpkisss
      361 makirnynik d
//
LOCUS       XP_041321930             371 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 57 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321930
VERSION     XP_041321930.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465996.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="coiled-coil domain-containing protein 57 isoform
                     X3"
                     /calculated_mol_wt=41205
     CDS             1..371
                     /gene="CCDC57"
                     /coded_by="XM_041465996.1:820..1935"
                     /db_xref="GeneID:121352775"
ORIGIN      
        1 mrkemeslde qmlsslpqte drqlaeqgsl stnkistgtt lsnikvsstk ldcivnpdte
       61 egpepkvlee nmvafgqqlp dvgtgvgcqy svkhtlrgmq nklkeaarki silnqekrql
      121 iemgnrlrae lgmvlkkgvw hpvsskhctv ciasdsllpr elvertqcql svlkhlqhrl
      181 ttqelqctrq ehpsrfsslt acpslkeeea psscgeetel psnevwidfs ienhgpdtfs
      241 atkadtstki vqtqllsqsp shvqqvqlss srphtfcqil dtgsslslls prknssqgef
      301 evvhsikqse esqqnvktkd kletsaedlt vkgtrlevqq klksrslsca hllkpkisss
      361 makirnynik d
//
LOCUS       XP_041321931             352 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 57 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321931
VERSION     XP_041321931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465997.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="coiled-coil domain-containing protein 57 isoform
                     X4"
                     /calculated_mol_wt=39563
     CDS             1..352
                     /gene="CCDC57"
                     /coded_by="XM_041465997.1:169..1227"
                     /db_xref="GeneID:121352775"
ORIGIN      
        1 mngflrlrsk qqlslaagqe rilkqskmqa elnwqqlcen aecnwyqkse dpihslsssr
       61 eeifqhgdes slckyipale ikklqeqnas lraaiaqmrk emesldeqml sslpqtedrq
      121 laeqgslstn kistgttlsn ikvsstkldc ivnpdteegp epkvleenmv afgqqlpdvg
      181 tgvgcqysvk htlrgmqnkl keaarkisil nqekrqliem gnrlraelgm vlkkgvwhpv
      241 sskhctvcia sdsllprelv ertqcqlsvl khlqhrlttq elqctrqehp srfssltacp
      301 slkeeeapss cgeetelpsn egslklyiqs snlknlskms kprinlkhql ki
//
LOCUS       XP_041321933             406 aa            linear   VRT 06-MAY-2021
DEFINITION  probable low-specificity L-threonine aldolase 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321933
VERSION     XP_041321933.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041465999.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..406
                     /product="probable low-specificity L-threonine aldolase 2
                     isoform X1"
                     /calculated_mol_wt=43591
     Region          28..377
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(85..86,89,166,199,202,227,230)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99748"
     Site            230
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99748"
     CDS             1..406
                     /gene="LOC121352777"
                     /coded_by="XM_041465999.1:35..1255"
                     /db_xref="GeneID:121352777"
ORIGIN      
        1 mrtvlrrgwl pgpggrqprg paaapplvvd lrsdtvtrpc agmrramara avgdddyged
       61 pavnelqrra aatlgtesal fvptatmanl iavmchcqrr gtqlflgrda hlhvyehgga
      121 aqvagvhsqa lpdlpngtfd leqleqaire ahgsqyhprp eliclenths saggralplt
      181 ylrqvrglad hyglrvhmdg arlmnaavaq gvepaqiaqh cdsvslcfsk glgapagavl
      241 agcrqfvaea wrvrkllggg mrqvgvlaaa arlglqhaea tlrrdhdnar rfaegihvld
      301 splcsvnlaa vetnivmvni qgawpsptel cdrlravsee eeaetgqavs vllfpwsart
      361 vravwhrnis ardtelarrk lefvarkcqe elalglhpmp pgsgga
//
LOCUS       XP_041321934             360 aa            linear   VRT 06-MAY-2021
DEFINITION  probable low-specificity L-threonine aldolase 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321934
VERSION     XP_041321934.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466000.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..360
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..360
                     /product="probable low-specificity L-threonine aldolase 2
                     isoform X2"
                     /calculated_mol_wt=38685
     Region          28..331
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            184
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99748"
     CDS             1..360
                     /gene="LOC121352777"
                     /coded_by="XM_041466000.1:35..1117"
                     /db_xref="GeneID:121352777"
ORIGIN      
        1 mrtvlrrgwl pgpggrqprg paaapplvvd lrsdtvtrpc agmrramara avgdddyged
       61 pavnelqrra aatlgtesal fvptatmanl iavmchcqrr gtqlflgrda hlhvyehgga
      121 aqvagvhsqa lpdlpngtfd leqleqaire ahgsqyhprp eliclenths saggralplt
      181 ylrqglgapa gavlagcrqf vaeawrvrkl lgggmrqvgv laaaarlglq haeatlrrdh
      241 dnarrfaegi hvldsplcsv nlaavetniv mvniqgawps ptelcdrlra vseeeeaetg
      301 qavsvllfpw sartvravwh rnisardtel arrklefvar kcqeelalgl hpmppgsgga
//
LOCUS       XP_041321935             333 aa            linear   VRT 06-MAY-2021
DEFINITION  probable low-specificity L-threonine aldolase 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321935
VERSION     XP_041321935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="probable low-specificity L-threonine aldolase 2
                     isoform X3"
                     /calculated_mol_wt=35872
     Region          <48..304
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            157
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99748"
     CDS             1..333
                     /gene="LOC121352777"
                     /coded_by="XM_041466001.1:60..1061"
                     /db_xref="GeneID:121352777"
ORIGIN      
        1 mgarrwgqps ashpgqpcpp qscsagprrl wgrnrlcscp rppwptsspv agvhsqalpd
       61 lpngtfdleq leqaireahg sqyhprpeli clenthssag gralpltylr qvrgladhyg
      121 lrvhmdgarl mnaavaqgve paqiaqhcds vslcfskglg apagavlagc rqfvaeawrv
      181 rkllgggmrq vgvlaaaarl glqhaeatlr rdhdnarrfa egihvldspl csvnlaavet
      241 nivmvniqga wpsptelcdr lravseeeea etgqavsvll fpwsartvra vwhrnisard
      301 telarrklef varkcqeela lglhpmppgs gga
//
LOCUS       XP_041321936             413 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321936
VERSION     XP_041321936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="casein kinase I isoform X1"
                     /calculated_mol_wt=47099
     Region          8..282
                     /region_name="STKc_CK1_delta_epsilon"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinases, Casein Kinase 1 delta and epsilon; cd14125"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,88,90,128,130,132..133,135,
                     149,152,175..178)
                     /site_type="active"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,130,132..133,135,149)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271027"
     Site            order(19,88,90,128,130,132,152,175..178)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271027"
     Site            order(148..158,160..178)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271027"
     CDS             1..413
                     /gene="CSNK1D"
                     /coded_by="XM_041466002.1:149..1390"
                     /db_xref="GeneID:121352778"
ORIGIN      
        1 melrvgnryr lgrkigsgsf gdiylgtdia ageevaikle cvktkhpqlh ieskiykmmq
       61 ggvgiptikw cgaegdynvm vmellgpsle dlfnfcsrkf slktvlllad qmisrieyih
      121 sknfihrdvk pdnflmglgk kgnlvyiidf glakkyrdar thqhipyren knltgtarya
      181 sinthlgieq srrddleslg yvlmyfnlgs lpwqglkaat krqkyerise kkmstpievl
      241 ckgypsefat ylnfcrslrf ddkpdysylr qlfrnlfhrq gfsydyvfdw nmlkfgasra
      301 aedaererre reerlrhtrn pavrglpsta sgrlrgtqdv apptpltpts haantsprpv
      361 sgmererkvs mrlhrgapvn isssdltgrq dtsrmstsqg flylqrilsv aks
//
LOCUS       XP_041321937             409 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321937
VERSION     XP_041321937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466003.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="casein kinase I isoform X2"
                     /calculated_mol_wt=46670
     Region          8..282
                     /region_name="STKc_CK1_delta_epsilon"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinases, Casein Kinase 1 delta and epsilon; cd14125"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,88,90,128,130,132..133,135,
                     149,152,175..178)
                     /site_type="active"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,130,132..133,135,149)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271027"
     Site            order(19,88,90,128,130,132,152,175..178)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271027"
     Site            order(148..158,160..178)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271027"
     CDS             1..409
                     /gene="CSNK1D"
                     /coded_by="XM_041466003.1:149..1378"
                     /db_xref="GeneID:121352778"
ORIGIN      
        1 melrvgnryr lgrkigsgsf gdiylgtdia ageevaikle cvktkhpqlh ieskiykmmq
       61 ggvgiptikw cgaegdynvm vmellgpsle dlfnfcsrkf slktvlllad qmisrieyih
      121 sknfihrdvk pdnflmglgk kgnlvyiidf glakkyrdar thqhipyren knltgtarya
      181 sinthlgieq srrddleslg yvlmyfnlgs lpwqglkaat krqkyerise kkmstpievl
      241 ckgypsefat ylnfcrslrf ddkpdysylr qlfrnlfhrq gfsydyvfdw nmlkfgasra
      301 aedaererre reerlrhtrn pavrglpsta sgrlrgtqdv apptpltpts haantsprpv
      361 sgmererkvs mrlhrgapvn isssdltgrq dtsrmstsqn sipfehhgk
//
LOCUS       XP_041321938             415 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041321938
VERSION     XP_041321938.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466004.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..415
                     /product="casein kinase I isoform X3"
                     /calculated_mol_wt=47239
     Region          8..282
                     /region_name="STKc_CK1_delta_epsilon"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinases, Casein Kinase 1 delta and epsilon; cd14125"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,88,90,128,130,132..133,135,
                     149,152,175..178)
                     /site_type="active"
                     /db_xref="CDD:271027"
     Site            order(15..21,23,36,38,82..86,130,132..133,135,149)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271027"
     Site            order(19,88,90,128,130,132,152,175..178)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271027"
     Site            order(148..158,160..178)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271027"
     CDS             1..415
                     /gene="CSNK1D"
                     /coded_by="XM_041466004.1:233..1480"
                     /db_xref="GeneID:121352778"
ORIGIN      
        1 melrvgnryr lgrkigsgsf gdiylgtdia ageevaikle cvktkhpqlh ieskiykmmq
       61 ggvgiptikw cgaegdynvm vmellgpsle dlfnfcsrkf slktvlllad qmisrieyih
      121 sknfihrdvk pdnflmglgk kgnlvyiidf glakkyrdar thqhipyren knltgtarya
      181 sinthlgieq srrddleslg yvlmyfnlgs lpwqglkaat krqkyerise kkmstpievl
      241 ckgypsefat ylnfcrslrf ddkpdysylr qlfrnlfhrq gfsydyvfdw nmlkfgasra
      301 aedaererre reerlrhtrn pavrglpsta sgrlrgtqdv apptpltpts haantsprpv
      361 sgmererkvs mrlhrgapvn isssdltgrq dtsrmstsqi parvttsvlq savhr
//
LOCUS       XP_041321939             405 aa            linear   VRT 06-MAY-2021
DEFINITION  NAD-dependent protein deacetylase sirtuin-7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321939
VERSION     XP_041321939.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466005.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="NAD-dependent protein deacetylase sirtuin-7"
                     /calculated_mol_wt=45914
     Region          102..315
                     /region_name="SIRT7"
                     /note="Eukaryotic and prokaryotic group (class4) which
                     includes human sirtuin SIRT6, SIRT7, and several bacterial
                     homologs; and are members of the SIR2 family of proteins,
                     silent information regulator 2 (Sir2) enzymes which
                     catalyze NAD+-dependent protein...; cd01410"
                     /db_xref="CDD:238701"
     Site            order(110,112..113,120..121,150,168..169,171,188,269,274,
                     299..300,315)
                     /site_type="other"
                     /note="NAD+ binding site [chemical binding]"
                     /db_xref="CDD:238701"
     Site            order(170,188,238,240..244,273..274,278)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238701"
     Site            order(196,199,226,229)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:238701"
     CDS             1..405
                     /gene="SIRT7"
                     /coded_by="XM_041466005.1:2438..3655"
                     /db_xref="GeneID:121352779"
ORIGIN      
        1 maaggslsrs erkaaaraei lqqeeqrdrr rqvsriwrkp paerspeecq vlsesedivr
       61 elerrrkrre rlrrrqeevc depeeltrkv aelaaavrga rhlviytgag istaasipdy
      121 rgpngiwtll qkgrsvraad lseaeptlth msiaclhkhn lvqhvvsqnc dglhlrsglp
      181 raaiselhgn myievctsct pnreyvrvfd vtertalhrh htgrmchkcg aqlrdtivhf
      241 gekgtlrqpl nweaateaas kadvilclgs slkvlkkypr lwcmskpptr rpklyivnlq
      301 wtpkddlaal klhgrcddvm rllmaelglq iprydrardp ifalaeplrp geegthsrkp
      361 vapprereep reqeqprera eaavgrpggw fgrgcakgar rrksr
//
LOCUS       XP_041321940             381 aa            linear   VRT 06-MAY-2021
DEFINITION  ethanolamine-phosphate cytidylyltransferase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321940
VERSION     XP_041321940.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466006.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="ethanolamine-phosphate cytidylyltransferase"
                     /calculated_mol_wt=42583
     Region          22..371
                     /region_name="PTZ00308"
                     /note="ethanolamine-phosphate cytidylyltransferase;
                     Provisional"
                     /db_xref="CDD:140329"
     CDS             1..381
                     /gene="PCYT2"
                     /coded_by="XM_041466006.1:54..1199"
                     /db_xref="GeneID:121352780"
ORIGIN      
        1 mlrngaaggg gaaagggghr pvrvwcdgcy dmvhyghsnq lrqaramgdy livgvhtdee
       61 iakhkgppvf tqeerykmvq aikwvdeiap gapyvttlet ldkyscdfcv hgdditltid
      121 gkdtyeevkt agryreckrt qgvsttdlvg rmllmtkahh snidedldyr khtdnfgkgp
      181 kghspwtgvs qflqtsqkii qfasgkepqp gdtiiyvaga fdlfhvghvd flekvhqlae
      241 kpyiiaglhf dqevnrykgk nypimniher tlsvlacryv sevvigapya vtadlldhfr
      301 valvchgmte vvpdkdgsdp yeepkqrgif qlvdsgsnlt tdlivqriik nrlefearnq
      361 kkeakelavl eamrrleeek h
//
LOCUS       XP_041321941             363 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: beta-1,3-N-acetylglucosaminyltransferase
            radical fringe [Pyrgilauda ruficollis].
ACCESSION   XP_041321941
VERSION     XP_041321941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466007.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="LOW QUALITY PROTEIN:
                     beta-1,3-N-acetylglucosaminyltransferase radical fringe"
                     /calculated_mol_wt=37008
     Region          92..342
                     /region_name="Fringe"
                     /note="Fringe-like; pfam02434"
                     /db_xref="CDD:367085"
     CDS             1..363
                     /gene="RFNG"
                     /coded_by="XM_041466007.1:137..1228"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121352781"
ORIGIN      
        1 msapclglrr agvllslgaa allllllprg qrpxxxxxxx xxxxxxxxxx xxxxxxxxxs
       61 arapggggla ggsqlarrgr lgsagsaare slelkdifia vkttrkyhks rldlllqtwi
      121 sqargqtfif tdwedrelrl kagdhmintn csavhtrqal cckmsveydk flesgqkwfc
      181 hvdddnyvnp rtllhllsaf shsqdvyvgr psldhpieaa dhvqsdgskt tvkfwfatgg
      241 agfcisrgla lkmspwaslg nfistaervr lpddctigyi iegllevkll hsplfhshle
      301 nlqrlqgesv lqqvtlsygd penkhnvvsv ggvfglqqdp trfksvhcll ypdtiwcpak
      361 kms
//
LOCUS       XP_041321942             507 aa            linear   VRT 06-MAY-2021
DEFINITION  activin receptor type-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321942
VERSION     XP_041321942.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466008.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="activin receptor type-1"
                     /calculated_mol_wt=56700
     Region          28..98
                     /region_name="TFP_LU_ECD_ALK2"
                     /note="extracellular domain (ECD) found in activin
                     receptor-like kinase 2 (ALK-2) and similar proteins;
                     cd23535"
                     /db_xref="CDD:467065"
     Region          177..204
                     /region_name="TGF_beta_GS"
                     /note="Transforming growth factor beta type I GS-motif;
                     pfam08515"
                     /db_xref="CDD:462503"
     Region          200..497
                     /region_name="STKc_ACVR1_ALK1"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Activin Type I Receptor and Activin receptor-Like Kinase
                     1; cd14142"
                     /db_xref="CDD:271044"
     Site            order(200..201,204..205,243..244,247..248,251..252,266,
                     268)
                     /site_type="other"
                     /note="FKBP12 binding site [polypeptide binding]"
                     /db_xref="CDD:271044"
     Site            order(212..216,220,231,233,261,281..284,288,290,334,336,
                     338..339,341,352,355,375..378)
                     /site_type="active"
                     /db_xref="CDD:271044"
     Site            order(212..218,220,231,233,281..282,284,288,338..339,341,
                     352)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271044"
     Site            order(216,288,290,334,336,338,355,375..378)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271044"
     Site            351..378
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271044"
     CDS             1..507
                     /gene="ACVR1"
                     /coded_by="XM_041466008.1:161..1684"
                     /db_xref="GeneID:121352783"
ORIGIN      
        1 milpvlmvma fpspswqdde rklkmipyec vcegiscgng drcqgqrcfa slsindgakv
       61 yqkgcfqvye qrkmtcktpp spsqaveccq ghlcnmnita qlpsakgqtf qgeaagysme
      121 tliivilapv vvlivfsava vliirriqkn hmerlnsrda eygtieglia snvgdstlad
      181 lldhsctsgs gsglpflvqr tvarqitlve cvgkgrygev wrgqwqgenv avkifssrde
      241 kswfretely ntvllrheni lgfiasdmts rnsstqlwli thyhemgsly dylqlttldt
      301 vsclrivlsi asglahlhie ifgtqgkpai shrdlkskni lvkkngqcci adlglavmhs
      361 qstnqldvgn nprvgtkrym apevldetiq adcfdsykrv diwafglvlw evarrmvsng
      421 ivedykppfy dlvpndpsfe dmrkvvcvdq qrpnipnrwf sdptltslak lmkecwyqnp
      481 sarltalrik ktltkidnsl dklkadc
//
LOCUS       XP_041321943             354 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 4 group A member 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321943
VERSION     XP_041321943.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466009.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..354
                     /product="nuclear receptor subfamily 4 group A member 2
                     isoform X1"
                     /calculated_mol_wt=38244
     Region          261..>290
                     /region_name="NR_DBD_like"
                     /note="DNA-binding domain of nuclear receptors is composed
                     of two C4-type zinc fingers; cl02596"
                     /db_xref="CDD:413390"
     CDS             1..354
                     /gene="LOC121352784"
                     /coded_by="XM_041466009.1:217..1281"
                     /db_xref="GeneID:121352784"
ORIGIN      
        1 mpcvqaqygs spqgaspasq sysyhssgey ssdfltpefv kfsmdltnte itattslpsf
       61 stfmdnynts ydvkppclyq mplsgqqssi kvediqmhgy qqhghlppqs eemmshsgsv
      121 yykpsspptp stpgfqvqhg pvwddpgslh nfhpnyvatt hmieqrktpv srlslfsfkq
      181 sppgtpvssc qmrfdgplhv pmgaepagph hgvdgqpfav pgsirkqpsm afpglqlghp
      241 pqlldsqvps ppsrgspsne glcavcgdna acqhygvrtc egckgffkvs gagprragpg
      301 garavppryk kprssrnpra gvapairgrp gpprqlrrra paplcrrnrl prtr
//
LOCUS       XP_041321944             354 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 4 group A member 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321944
VERSION     XP_041321944.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466010.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..354
                     /product="nuclear receptor subfamily 4 group A member 2
                     isoform X1"
                     /calculated_mol_wt=38244
     Region          261..>290
                     /region_name="NR_DBD_like"
                     /note="DNA-binding domain of nuclear receptors is composed
                     of two C4-type zinc fingers; cl02596"
                     /db_xref="CDD:413390"
     CDS             1..354
                     /gene="LOC121352784"
                     /coded_by="XM_041466010.1:93..1157"
                     /db_xref="GeneID:121352784"
ORIGIN      
        1 mpcvqaqygs spqgaspasq sysyhssgey ssdfltpefv kfsmdltnte itattslpsf
       61 stfmdnynts ydvkppclyq mplsgqqssi kvediqmhgy qqhghlppqs eemmshsgsv
      121 yykpsspptp stpgfqvqhg pvwddpgslh nfhpnyvatt hmieqrktpv srlslfsfkq
      181 sppgtpvssc qmrfdgplhv pmgaepagph hgvdgqpfav pgsirkqpsm afpglqlghp
      241 pqlldsqvps ppsrgspsne glcavcgdna acqhygvrtc egckgffkvs gagprragpg
      301 garavppryk kprssrnpra gvapairgrp gpprqlrrra paplcrrnrl prtr
//
LOCUS       XP_041321947             209 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321947
VERSION     XP_041321947.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466013.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="suppressor of cytokine signaling 3 isoform X2"
                     /calculated_mol_wt=23113
     Region          35..134
                     /region_name="SH2_SOCS3"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10384"
                     /db_xref="CDD:198247"
     Site            order(53,71,73,81,94)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198247"
     Site            order(104,106,127)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198247"
     Region          168..209
                     /region_name="SOCS_SOCS3"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS3-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS3, like
                     CIS1 and SOCS1, is involved in the...; cd03737"
                     /db_xref="CDD:239706"
     Site            order(169..174,180,186,192,197)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239706"
     CDS             1..209
                     /gene="LOC121352784"
                     /coded_by="XM_041466013.1:203..832"
                     /db_xref="GeneID:121352784"
ORIGIN      
        1 mvthskfpaa gmsrpldtsl rlktfsskse yqlvvntvrk lqesgfywst vtggeanlll
       61 stepagtfli rdssdqrhff tlsvktesgt knlriqcegg sfslqsdphs sqpvprfdcv
      121 lklvhhympp tpcavpeqpg galhpkrtyy iysggekipl vlsrplsssv stlqhlcrkt
      181 vnghldsyek mtqlpapike fldqydapl
//
LOCUS       XP_041321948             209 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321948
VERSION     XP_041321948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="suppressor of cytokine signaling 3 isoform X2"
                     /calculated_mol_wt=23113
     Region          35..134
                     /region_name="SH2_SOCS3"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10384"
                     /db_xref="CDD:198247"
     Site            order(53,71,73,81,94)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198247"
     Site            order(104,106,127)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198247"
     Region          168..209
                     /region_name="SOCS_SOCS3"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS3-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. SOCS3, like
                     CIS1 and SOCS1, is involved in the...; cd03737"
                     /db_xref="CDD:239706"
     Site            order(169..174,180,186,192,197)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239706"
     CDS             1..209
                     /gene="LOC121352784"
                     /coded_by="XM_041466014.1:292..921"
                     /db_xref="GeneID:121352784"
ORIGIN      
        1 mvthskfpaa gmsrpldtsl rlktfsskse yqlvvntvrk lqesgfywst vtggeanlll
       61 stepagtfli rdssdqrhff tlsvktesgt knlriqcegg sfslqsdphs sqpvprfdcv
      121 lklvhhympp tpcavpeqpg galhpkrtyy iysggekipl vlsrplsssv stlqhlcrkt
      181 vnghldsyek mtqlpapike fldqydapl
//
LOCUS       XP_041321949             329 aa            linear   VRT 06-MAY-2021
DEFINITION  cytohesin-interacting protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321949
VERSION     XP_041321949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466015.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="cytohesin-interacting protein isoform X1"
                     /calculated_mol_wt=35808
     Region          52..142
                     /region_name="PDZ_tamalin_CYTIP-like"
                     /note="PDZ domain of tamalin, cytohesin-1-interacting
                     protein (CYTIP), and related domains; cd06713"
                     /db_xref="CDD:467197"
     Site            order(66..72,91,94,123,127,130..131)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467197"
     CDS             1..329
                     /gene="LOC121352785"
                     /coded_by="XM_041466015.1:285..1274"
                     /db_xref="GeneID:121352785"
ORIGIN      
        1 malrrllqps pspgpadgrr mqhlastvgt lprgrrqlal arssslgdcs kpqrhlvail
       61 kedketfgfe iqtlrfshqn dfslevctcv crvqeespah lsglqpgdil tsingvsteg
      121 fahkqivdli kssgnylrle tvngalllrk meletklqal kqelhqrwge lrallarerl
      181 llhgevtdsa llgpaepgpg cdspgpflpt kprfssdsss rsrlssmtlg sedsfyqgsa
      241 fedsaaesls rqgstddeca fprargslrr nrsvslassg sasplghssa fsssfgtlpr
      301 nsrrasvrkq llkfipgfhr aveeeesrv
//
LOCUS       XP_041321950             328 aa            linear   VRT 06-MAY-2021
DEFINITION  cytohesin-interacting protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321950
VERSION     XP_041321950.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466016.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="cytohesin-interacting protein isoform X2"
                     /calculated_mol_wt=35679
     Region          52..142
                     /region_name="PDZ_tamalin_CYTIP-like"
                     /note="PDZ domain of tamalin, cytohesin-1-interacting
                     protein (CYTIP), and related domains; cd06713"
                     /db_xref="CDD:467197"
     Site            order(66..72,91,94,123,127,130..131)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467197"
     CDS             1..328
                     /gene="LOC121352785"
                     /coded_by="XM_041466016.1:285..1271"
                     /db_xref="GeneID:121352785"
ORIGIN      
        1 malrrllqps pspgpadgrr mqhlastvgt lprgrrqlal arssslgdcs kpqrhlvail
       61 kedketfgfe iqtlrfshqn dfslevctcv crvqeespah lsglqpgdil tsingvsteg
      121 fahkqivdli kssgnylrle tvngalllrk meletklqal kelhqrwgel rallarerll
      181 lhgevtdsal lgpaepgpgc dspgpflptk prfssdsssr srlssmtlgs edsfyqgsaf
      241 edsaaeslsr qgstddecaf prargslrrn rsvslassgs asplghssaf sssfgtlprn
      301 srrasvrkql lkfipgfhra veeeesrv
//
LOCUS       XP_041321951             315 aa            linear   VRT 06-MAY-2021
DEFINITION  pyrroline-5-carboxylate reductase 1, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321951
VERSION     XP_041321951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="pyrroline-5-carboxylate reductase 1,
                     mitochondrial"
                     /calculated_mol_wt=32832
     Region          1..268
                     /region_name="ProC"
                     /note="Pyrroline-5-carboxylate reductase [Amino acid
                     transport and metabolism]; COG0345"
                     /db_xref="CDD:440114"
     CDS             1..315
                     /gene="PYCR1"
                     /coded_by="XM_041466017.1:13..960"
                     /db_xref="GeneID:121352786"
ORIGIN      
        1 msvgfigagq lafalargft aagvlaahki tasspdtdlp tvsglrkmgv nftvsnkdtv
       61 kssdvlflav kppiipfile evgpdieprh ivvscaagvt issiekklst fcptpkvirc
      121 mtntpvivre gatvyatgth advedgklle qlmasvgfct eveedlidav tglsgsgpay
      181 aftaldalad ggvkmglprr lavrlgaqal lgaakmlles eqhpgqlkdn vcspggatih
      241 alhflesggf rsllinavea scirtrelqh ladqeeispa aikktlldkv klespslsva
      301 sagkvslfts kskkn
//
LOCUS       XP_041321952             307 aa            linear   VRT 06-MAY-2021
DEFINITION  uridine phosphorylase 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321952
VERSION     XP_041321952.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466018.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..307
                     /product="uridine phosphorylase 2 isoform X1"
                     /calculated_mol_wt=33595
     Region          25..299
                     /region_name="UP_hUPP-like"
                     /note="uridine phosphorylases similar to a human UPP1 and
                     UPP2; cd17763"
                     /db_xref="CDD:350163"
     Site            order(29..30,54,88..89,104,107..108,110..111,114..115,
                     117..118,155..156,163..167,172,205..210,212,214..221,223,
                     225,229,243,251,254..255)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:350163"
     Site            order(53..55,58,88,104,132..137,207,211,213,241..244,267,
                     275)
                     /site_type="active"
                     /db_xref="CDD:350163"
     Site            order(53..55,58,88,132..135)
                     /site_type="other"
                     /note="phosphate binding site [ion binding]"
                     /db_xref="CDD:350163"
     CDS             1..307
                     /gene="UPP2"
                     /coded_by="XM_041466018.1:146..1069"
                     /db_xref="GeneID:121352787"
ORIGIN      
        1 mtettgysgs glvlvknphl dlmeedvlyh ldlgtkthnl pamfgdikfv cvggspnrmr
       61 afaqfmqrel glagagedva dicagsdrya myragpvlsi shgmgipsis imlhelikll
      121 hhakcrdvti irigtsgglg ieagsvvitd tavdssfqpr feqvvlddvv vrsteldkdl
      181 aeellacsrd ipdfptligh tmctydfyeg qgrldgalcs fssekkleyl rrayeagvrn
      241 iemestafaa lcglcglkaa vvcvalldrl qgdqiraphe vlweyqqrpq rliaafirkr
      301 lglprtd
//
LOCUS       XP_041321953             254 aa            linear   VRT 06-MAY-2021
DEFINITION  uridine phosphorylase 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321953
VERSION     XP_041321953.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466019.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="uridine phosphorylase 2 isoform X2"
                     /calculated_mol_wt=27999
     Region          25..246
                     /region_name="UP_hUPP-like"
                     /note="uridine phosphorylases similar to a human UPP1 and
                     UPP2; cd17763"
                     /db_xref="CDD:350163"
     Site            order(29..30,51,54..55,57..58,61..62,64..65,102..103,
                     110..114,119,152..157,159,161..168,170,172,176,190,198,
                     201..202)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:350163"
     CDS             1..254
                     /gene="UPP2"
                     /coded_by="XM_041466019.1:146..910"
                     /db_xref="GeneID:121352787"
ORIGIN      
        1 mtettgysgs glvlvknphl dlmeedvlyh ldlgtkthnl pamfgdikhg mgipsisiml
       61 helikllhha kcrdvtiiri gtsgglgiea gsvvitdtav dssfqprfeq vvlddvvvrs
      121 teldkdlaee llacsrdipd fptlightmc tydfyegqgr ldgalcsfss ekkleylrra
      181 yeagvrniem estafaalcg lcglkaavvc valldrlqgd qiraphevlw eyqqrpqrli
      241 aafirkrlgl prtd
//
LOCUS       XP_041321954             302 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid-associated differentiation marker-like protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321954
VERSION     XP_041321954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466020.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="myeloid-associated differentiation marker-like
                     protein 2"
                     /calculated_mol_wt=32965
     Region          14..143
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     Region          154..292
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..302
                     /gene="MYADML2"
                     /coded_by="XM_041466020.1:380..1288"
                     /db_xref="GeneID:121352788"
ORIGIN      
        1 mmestggpyl ntaavtspvg iarllqmtfg cttfslvahq ggfsaaygtf cmfvwtfcfa
       61 itvfiiacef thlhsclsls wgnftaafam latlmsvtaa viyplyfvqv gcypigcevr
      121 dfriaasvfa gllfvtyaae vfltrakpgq vtsymatvsg llkivqafva ciifgalvnd
      181 sqygkyvatq wcvavysfcf vvtvvvvafs vtgktallwf pfersvviyt fgavllyasa
      241 aviwpvfcfd skygsprrpg lcakgkcpwd sqlviaifty vnlllyvldl aysqrirfvs
      301 hi
//
LOCUS       XP_041321955             291 aa            linear   VRT 06-MAY-2021
DEFINITION  kynurenine formamidase [Pyrgilauda ruficollis].
ACCESSION   XP_041321955
VERSION     XP_041321955.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466021.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="kynurenine formamidase"
                     /calculated_mol_wt=31958
     Region          66..291
                     /region_name="Aes"
                     /note="Acetyl esterase/lipase [Lipid transport and
                     metabolism]; COG0657"
                     /db_xref="CDD:440422"
     CDS             1..291
                     /gene="AFMID"
                     /coded_by="XM_041466021.1:94..969"
                     /db_xref="GeneID:121352790"
ORIGIN      
        1 mggwrdlsaq aledhyspsr wsprldrdti idahlavtaa gterarasgq tllhvpygdg
       61 dgekldiyfp tdpcetfpvl vyihggywqc mskddsgfaa pplvsqgvav vavgydiapk
      121 ghmdtmvlqv rrslvflvqr yprirgiylc ghsagahlaa mvlstdwtef rvvpdikgav
      181 lvsglydlep llhtyvndal nmsrevaqrn spmrhvtpav paacqvlvav aqhdspefrr
      241 qsqeysqalr aagwsvslld lagvdhfdvi erlsedsyil tqvilnmisr a
//
LOCUS       XP_041321956             284 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial dicarboxylate carrier [Pyrgilauda ruficollis].
ACCESSION   XP_041321956
VERSION     XP_041321956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="mitochondrial dicarboxylate carrier"
                     /calculated_mol_wt=31062
     Region          12..90
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          92..187
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          195..281
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..284
                     /gene="SLC25A10"
                     /coded_by="XM_041466022.1:64..918"
                     /db_xref="GeneID:121352791"
ORIGIN      
        1 maeqrvsrwy fgglassgaa ccthpldllk vhlqtqqevk mrmtgmamhv irtdgflaly
       61 nglsaslcrq mtysltrfgi yetaknrlgn qgpppfyqkv llaavggstg gfvgtpadmv
      121 nvrmqndmkq ppaqrrnysh aldgmyrvlr eeglkklfsg asvasargal vtvgqlscyd
      181 qakqlvlatg llsdnvfthf lssfiaglca tflcqpldvl ktrlmnshge yqgvvhcame
      241 taklgplafy kgfvpaavrl vpqtvltflf leqlrkyfgi kvtt
//
LOCUS       XP_041321957             284 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial dicarboxylate carrier [Pyrgilauda ruficollis].
ACCESSION   XP_041321957
VERSION     XP_041321957.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466023.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="mitochondrial dicarboxylate carrier"
                     /calculated_mol_wt=31062
     Region          12..90
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          92..187
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          195..281
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..284
                     /gene="SLC25A10"
                     /coded_by="XM_041466023.1:64..918"
                     /db_xref="GeneID:121352791"
ORIGIN      
        1 maeqrvsrwy fgglassgaa ccthpldllk vhlqtqqevk mrmtgmamhv irtdgflaly
       61 nglsaslcrq mtysltrfgi yetaknrlgn qgpppfyqkv llaavggstg gfvgtpadmv
      121 nvrmqndmkq ppaqrrnysh aldgmyrvlr eeglkklfsg asvasargal vtvgqlscyd
      181 qakqlvlatg llsdnvfthf lssfiaglca tflcqpldvl ktrlmnshge yqgvvhcame
      241 taklgplafy kgfvpaavrl vpqtvltflf leqlrkyfgi kvtt
//
LOCUS       XP_041321958             284 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial dicarboxylate carrier [Pyrgilauda ruficollis].
ACCESSION   XP_041321958
VERSION     XP_041321958.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466024.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="mitochondrial dicarboxylate carrier"
                     /calculated_mol_wt=31062
     Region          12..90
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          92..187
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          195..281
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..284
                     /gene="SLC25A10"
                     /coded_by="XM_041466024.1:64..918"
                     /db_xref="GeneID:121352791"
ORIGIN      
        1 maeqrvsrwy fgglassgaa ccthpldllk vhlqtqqevk mrmtgmamhv irtdgflaly
       61 nglsaslcrq mtysltrfgi yetaknrlgn qgpppfyqkv llaavggstg gfvgtpadmv
      121 nvrmqndmkq ppaqrrnysh aldgmyrvlr eeglkklfsg asvasargal vtvgqlscyd
      181 qakqlvlatg llsdnvfthf lssfiaglca tflcqpldvl ktrlmnshge yqgvvhcame
      241 taklgplafy kgfvpaavrl vpqtvltflf leqlrkyfgi kvtt
//
LOCUS       XP_041321960             277 aa            linear   VRT 06-MAY-2021
DEFINITION  THO complex subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041321960
VERSION     XP_041321960.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466026.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="THO complex subunit 4"
                     /calculated_mol_wt=28369
     Region          126..200
                     /region_name="RRM_THOC4"
                     /note="RNA recognition motif (RRM) found in THO complex
                     subunit 4 (THOC4) and similar proteins; cd12680"
                     /db_xref="CDD:410081"
     Site            order(144..145,148..149,181..182,184..187,189..193,196)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410081"
     CDS             1..277
                     /gene="ALYREF"
                     /coded_by="XM_041466026.1:1..834"
                     /db_xref="GeneID:121352792"
ORIGIN      
        1 madkmdmsld diiklnrsqr gasrggrggr grggtarggg pgrgggrgrr slgrggaagw
       61 gggsarggga daggplstpg aaagcealap vshvpvslqp kqlpekwqhd lfdsgfgaga
      121 gvetggkllv snldfgvsda diqelfaefg tlkkaavhyd rsgrslgtad vhferkadal
      181 kamkqyngvp ldgrpmniql vtsqidtqrr paqsvnrggm trnrgvsggf ggggnrrgtr
      241 ggnrgrgrga grtskqqlsa eeldaqlday narmdts
//
LOCUS       XP_041321961             246 aa            linear   VRT 06-MAY-2021
DEFINITION  L-xylulose reductase [Pyrgilauda ruficollis].
ACCESSION   XP_041321961
VERSION     XP_041321961.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466027.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="L-xylulose reductase"
                     /calculated_mol_wt=25757
     Region          3..246
                     /region_name="XR_like_SDR_c"
                     /note="xylulose reductase-like, classical (c) SDRs;
                     cd05351"
                     /db_xref="CDD:187609"
     Site            order(16,18..21,40..42,45,61..64,85..88,104,108,136..138,
                     151,155,181..184,186..189)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:187609"
     Site            order(66,93..95,97,99,102..103,106,110..111,114,117..118,
                     122,125,140..144,149..150,152..153,156..157,160..161,
                     163..168,170..171,205,207..210,212,215..216,219..220,223,
                     228,230..233,238..242,244..246)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:187609"
     Site            order(66,93..95,97,99,102..103,106,110..111,114,117..118,
                     122,125,140..144,149..150,152..153,156..157,160..161,
                     163..165,167..168)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:187609"
     Site            order(109,138,151,155)
                     /site_type="active"
                     /db_xref="CDD:187609"
     CDS             1..246
                     /gene="DCXR"
                     /coded_by="XM_041466027.1:20..760"
                     /db_xref="GeneID:121352793"
ORIGIN      
        1 mepqlsfggr ralvtgagkg igravavalg ragarvtals rtaadlesla recpgietlc
       61 vdladweave aavgaagpfe llvnnaavae lqpflevtrs alqrsldvnf gavlhvsqiv
      121 arqmiaqglp gaivnvssqa skralrdhav ycstksaldm lskvmamelg phkirvntvn
      181 ptvvmtdmgr inwsdpqksa aminriplgk faevddvvns ilfllsdksa mttgsslmid
      241 ggflvs
//
LOCUS       XP_041321962             226 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptogyrin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321962
VERSION     XP_041321962.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466028.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..226
                     /product="synaptogyrin-2"
                     /calculated_mol_wt=25088
     Region          22..167
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..226
                     /gene="SYNGR2"
                     /coded_by="XM_041466028.1:19..699"
                     /db_xref="GeneID:121352794"
ORIGIN      
        1 meggggayga akaggafdlv rfvqqpqvva rivsavfali vfaclvgdgy msrpedprlf
       61 cifnhnedac rygigigvla flacifffmv dvyfpqisnt tdrkylvlad lgfsglwtfl
      121 wfisfcfltn qwswtqaedv yigadsaraa itfsffsifs wallltfayk rykmgvedfa
      181 qsyadpspgv ptpyssypni shesyqqppf thtaeapegy qpppvy
//
LOCUS       XP_041321963             223 aa            linear   VRT 06-MAY-2021
DEFINITION  thymidine kinase, cytosolic [Pyrgilauda ruficollis].
ACCESSION   XP_041321963
VERSION     XP_041321963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466029.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..223
                     /product="thymidine kinase, cytosolic"
                     /calculated_mol_wt=24499
     Region          18..190
                     /region_name="TK"
                     /note="Thymidine kinase; cl23762"
                     /db_xref="CDD:451530"
     CDS             1..223
                     /gene="TK1"
                     /coded_by="XM_041466029.1:100..771"
                     /db_xref="GeneID:121352795"
ORIGIN      
        1 mncltvpgvh pgspsrprgq iqvifgpmfs gkstelmrrv rrfqlaqyrc llvkyakdtr
       61 ysssgvsthd kstmealpag llqdvyqeal gaavigideg qffpdivefc etmantgktv
      121 ivaaldgtfq rkafgsilnl vplaesvvkl navcmecfre asytkrlgae reveviggad
      181 kyhsvcracy frmrpqqagp enkenvplgl rqletaaprk ift
//
LOCUS       XP_041321964             204 aa            linear   VRT 06-MAY-2021
DEFINITION  rho GDP-dissociation inhibitor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321964
VERSION     XP_041321964.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466030.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="rho GDP-dissociation inhibitor 1"
                     /calculated_mol_wt=23100
     Region          12..201
                     /region_name="Rho_GDI"
                     /note="RHO protein GDP dissociation inhibitor; pfam02115"
                     /db_xref="CDD:460449"
     CDS             1..204
                     /gene="ARHGDIA"
                     /coded_by="XM_041466030.1:128..742"
                     /db_xref="GeneID:121352796"
ORIGIN      
        1 maeqeptaeq laqiaaenee dehsvnykpp aqksiqeiqe ldkddeslrk ykeallgavt
       61 vnadpnapnv vvtkltlvca tapgpleldl tgdlesykkq afvlkegvey rikisfrvnr
      121 eivsglkyiq htfrkgvkid kteymvgsyg praeeyeflt pmeeapkgml argsyniksk
      181 ftdddktdhl swewnltikk dwkd
//
LOCUS       XP_041321965             192 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related C3 botulinum toxin substrate 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321965
VERSION     XP_041321965.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466031.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="ras-related C3 botulinum toxin substrate 3
                     isoform X1"
                     /calculated_mol_wt=21257
     Region          3..176
                     /region_name="Rac1_like"
                     /note="Ras-related C3 botulinum toxin substrate 1 (rho
                     family, small GTP binding protein Rac1)-like consists of
                     Rac1, Rac2 and Rac3; cd01871"
                     /db_xref="CDD:206663"
     Site            order(3,5,31..32,35..36,38..39,41,43,52,56..61,64..67,
                     70..71,73..74)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206663"
     Site            order(13,15..18,116,118..119,159)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206663"
     Site            order(22,25..26,28,30..31,160,162)
                     /site_type="active"
                     /note="p67PhoxTPR effector interaction site [active]"
                     /db_xref="CDD:206663"
     Site            25..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206663"
     Site            order(32,34,36..38,61..64,67,70)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(35..36,59,64,66..67,69..70,73,103..104,106)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(35..37,39,56..58,64,67,70..71,73..74)
                     /site_type="other"
                     /note="Arfaptin/Por effector interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206663"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206663"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206663"
     Site            60..77
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206663"
     Site            115..118
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206663"
     Site            158..160
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206663"
     CDS             1..192
                     /gene="RAC3"
                     /coded_by="XM_041466031.1:125..703"
                     /db_xref="GeneID:121352797"
ORIGIN      
        1 mqaikcvvvg dgavgktcll isyttnafpg eyiptvfdny sanvmvdgkp vnlglwdtag
       61 qedydrlrpl sypqtdvfli cfslvspasf envrakwype vrhhcpntpi ilvgtkldlr
      121 ddkdtierlr dkklapityp qglamareig svkylecsal tqrglktvfd eairavlcpp
      181 pvkkpgkkct mf
//
LOCUS       XP_041321966             185 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related C3 botulinum toxin substrate 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321966
VERSION     XP_041321966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="ras-related C3 botulinum toxin substrate 3
                     isoform X2"
                     /calculated_mol_wt=20627
     Region          6..169
                     /region_name="Rac1_like"
                     /note="Ras-related C3 botulinum toxin substrate 1 (rho
                     family, small GTP binding protein Rac1)-like consists of
                     Rac1, Rac2 and Rac3; cd01871"
                     /db_xref="CDD:206663"
     Site            order(6,8..11,109,111..112,152)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206663"
     Site            order(15,18..19,21,23..24,153,155)
                     /site_type="active"
                     /note="p67PhoxTPR effector interaction site [active]"
                     /db_xref="CDD:206663"
     Site            18..33
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206663"
     Site            order(24..25,28..29,31..32,34,36,45,49..54,57..60,63..64,
                     66..67)
                     /site_type="other"
                     /note="GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(25,27,29..31,54..57,60,63)
                     /site_type="other"
                     /note="GAP (GTPase-activating protein) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(28..29,52,57,59..60,62..63,66,96..97,99)
                     /site_type="other"
                     /note="GDI (guanine nucleotide dissociation inhibitor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206663"
     Site            order(28..30,32,49..51,57,60,63..64,66..67)
                     /site_type="other"
                     /note="Arfaptin/Por effector interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206663"
     Site            28
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206663"
     Site            50..53
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206663"
     Site            53..70
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206663"
     Site            108..111
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206663"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206663"
     CDS             1..185
                     /gene="RAC3"
                     /coded_by="XM_041466032.1:125..682"
                     /db_xref="GeneID:121352797"
ORIGIN      
        1 mqaikavgkt cllisyttna fpgeyiptvf dnysanvmvd gkpvnlglwd tagqedydrl
       61 rplsypqtdv flicfslvsp asfenvrakw ypevrhhcpn tpiilvgtkl dlrddkdtie
      121 rlrdkklapi typqglamar eigsvkylec saltqrglkt vfdeairavl cpppvkkpgk
      181 kctmf
//
LOCUS       XP_041321968             148 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related C3 botulinum toxin substrate 3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321968
VERSION     XP_041321968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466034.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..148
                     /product="ras-related C3 botulinum toxin substrate 3
                     isoform X3"
                     /calculated_mol_wt=16603
     Region          <1..132
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            13..16
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206663"
     Site            order(15..16,32..33)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206663"
     Site            71..74
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206663"
     Site            114..116
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206663"
     CDS             1..148
                     /gene="RAC3"
                     /coded_by="XM_041466034.1:321..767"
                     /db_xref="GeneID:121352797"
ORIGIN      
        1 mvdgkpvnlg lwdtagqedy drlrplsypq tdvflicfsl vspasfenvr akwypevrhh
       61 cpntpiilvg tkldlrddkd tierlrdkkl apitypqgla mareigsvky lecsaltqrg
      121 lktvfdeair avlcpppvkk pgkkctmf
//
LOCUS       XP_041321969             189 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L12, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041321969
VERSION     XP_041321969.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466035.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..189
                     /product="39S ribosomal protein L12, mitochondrial"
                     /calculated_mol_wt=19846
     Region          54..188
                     /region_name="Ribosomal_L7_L12"
                     /note="Ribosomal protein L7/L12. Ribosomal protein L7/L12
                     refers to the large ribosomal subunit proteins L7 and L12,
                     which are identical except that L7 is acetylated at the N
                     terminus. It is a component of the L7/L12 stalk, which is
                     located at the surface of...; cd00387"
                     /db_xref="CDD:100102"
     Site            order(54,67..69,72..73,76,79,94,104..105,107..109,
                     119..120,142,144,146,148,150..151,165..166,168,171)
                     /site_type="other"
                     /note="core dimer interface [polypeptide binding]"
                     /db_xref="CDD:100102"
     Site            order(57,60,64,77,82)
                     /site_type="other"
                     /note="peripheral dimer interface [polypeptide binding]"
                     /db_xref="CDD:100102"
     Site            order(71,74..75,79,82)
                     /site_type="other"
                     /note="L10 interface [polypeptide binding]"
                     /db_xref="CDD:100102"
     Site            order(133..134,137..138,141,149..150,153)
                     /site_type="other"
                     /note="L11 interface [polypeptide binding]"
                     /db_xref="CDD:100102"
     Site            order(134,138,141,149..150,153)
                     /site_type="other"
                     /note="putative EF-Tu interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:100102"
     Site            order(134,137..138,141)
                     /site_type="other"
                     /note="putative EF-G interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:100102"
     CDS             1..189
                     /gene="MRPL12"
                     /coded_by="XM_041466035.1:59..628"
                     /db_xref="GeneID:121352798"
ORIGIN      
        1 mlpaalpaar ralltlpprr gppaglralg tgparrseal agapldtaak eyspkvrqlv
       61 rdiagltlle vadlnallke tlkipdvgvm ptaaaasllp aqaapqeeee vvplkkekth
      121 ftvrltelka adkvklikev knfvpgvnlv qakklveslp qeikanaske eaekikaale
      181 aaggtvvle
//
LOCUS       XP_041321970             180 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 16 [Pyrgilauda ruficollis].
ACCESSION   XP_041321970
VERSION     XP_041321970.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466036.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..180
                     /product="ADP-ribosylation factor-like protein 16"
                     /calculated_mol_wt=19115
     Region          11..174
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206644"
     Site            order(16..22,68,122..123,125,158..160)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206644"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206644"
     Site            51..53
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206644"
     Site            65..68
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206644"
     Site            order(67..68,82..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206644"
     Site            122..125
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206644"
     Site            158..160
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206644"
     CDS             1..180
                     /gene="ARL16"
                     /coded_by="XM_041466036.1:34..576"
                     /db_xref="GeneID:121352799"
ORIGIN      
        1 maagrspptf lllgaagggk sllvrrlrql saeepaelge ppatlptvgt nltdlrlprr
       61 vtvrelggcm gpiwpsyyse csallfvvda snpsqvsssc iqllsvlsaa plasvpvlvl
      121 fnkidlpcym slvemkslfr mqdivscatq pitlletsar dgtgladvlq wlrstlkdpc
//
LOCUS       XP_041321971             169 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1 regulatory subunit 27 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321971
VERSION     XP_041321971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..169
                     /product="protein phosphatase 1 regulatory subunit 27"
                     /calculated_mol_wt=18845
     Region          <53..>163
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          82..109
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(84..85,88..90,92..93,97,100,109,111,113,117..118,
                     121..123,125..126,130,133,142,144,146,149..150,153..155,
                     157..158,162)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          111..142
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..169
                     /gene="PPP1R27"
                     /coded_by="XM_041466037.1:258..767"
                     /db_xref="GeneID:121352800"
ORIGIN      
        1 mplclkaavs mrdycptvpr ysrytprysr ytprlraart vhfpndvvfq dhikqgdleq
       61 vgrfirarkv tldtiypsgm aalheavltg nldcvkllvk ygadihqrde ngwtplhmac
      121 sdgyadiary llslgaslea ttddgekpsd lidpeyedlv qllggtalr
//
LOCUS       XP_041321972             162 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor MafG [Pyrgilauda ruficollis].
ACCESSION   XP_041321972
VERSION     XP_041321972.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466038.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="transcription factor MafG"
                     /calculated_mol_wt=17888
     Region          46..115
                     /region_name="bZIP_Maf_small"
                     /note="Basic leucine zipper (bZIP) domain of small
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14717"
                     /db_xref="CDD:269865"
     Region          46..115
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269865"
     Site            order(56..58,60..62,64..65,68..69,71..72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269865"
     Site            order(72,75..76,79..80,82..83,86..87,89..90,93,96..97,100,
                     103..104,107..108)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269865"
     CDS             1..162
                     /gene="MAFG"
                     /coded_by="XM_041466038.1:99..587"
                     /db_xref="GeneID:121352801"
ORIGIN      
        1 mttpnkgnka lkvkrepgen gtsltdeelv tmsvrelnqh lrglskeeii qlkqrrrtlk
       61 nrgyaascrv krvtqkeele kqkaelqqev eklasenasm kmeldalrsk yealqnfart
      121 varspvtpar gplassmgpl vpgkvattsv itivksktda rs
//
LOCUS       XP_041321973             162 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor MafG [Pyrgilauda ruficollis].
ACCESSION   XP_041321973
VERSION     XP_041321973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="transcription factor MafG"
                     /calculated_mol_wt=17888
     Region          46..115
                     /region_name="bZIP_Maf_small"
                     /note="Basic leucine zipper (bZIP) domain of small
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14717"
                     /db_xref="CDD:269865"
     Region          46..115
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269865"
     Site            order(56..58,60..62,64..65,68..69,71..72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269865"
     Site            order(72,75..76,79..80,82..83,86..87,89..90,93,96..97,100,
                     103..104,107..108)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269865"
     CDS             1..162
                     /gene="MAFG"
                     /coded_by="XM_041466039.1:222..710"
                     /db_xref="GeneID:121352801"
ORIGIN      
        1 mttpnkgnka lkvkrepgen gtsltdeelv tmsvrelnqh lrglskeeii qlkqrrrtlk
       61 nrgyaascrv krvtqkeele kqkaelqqev eklasenasm kmeldalrsk yealqnfart
      121 varspvtpar gplassmgpl vpgkvattsv itivksktda rs
//
LOCUS       XP_041321974             162 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor MafG [Pyrgilauda ruficollis].
ACCESSION   XP_041321974
VERSION     XP_041321974.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466040.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="transcription factor MafG"
                     /calculated_mol_wt=17888
     Region          46..115
                     /region_name="bZIP_Maf_small"
                     /note="Basic leucine zipper (bZIP) domain of small
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14717"
                     /db_xref="CDD:269865"
     Region          46..115
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269865"
     Site            order(56..58,60..62,64..65,68..69,71..72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269865"
     Site            order(72,75..76,79..80,82..83,86..87,89..90,93,96..97,100,
                     103..104,107..108)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269865"
     CDS             1..162
                     /gene="MAFG"
                     /coded_by="XM_041466040.1:156..644"
                     /db_xref="GeneID:121352801"
ORIGIN      
        1 mttpnkgnka lkvkrepgen gtsltdeelv tmsvrelnqh lrglskeeii qlkqrrrtlk
       61 nrgyaascrv krvtqkeele kqkaelqqev eklasenasm kmeldalrsk yealqnfart
      121 varspvtpar gplassmgpl vpgkvattsv itivksktda rs
//
LOCUS       XP_041321975             162 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor MafG [Pyrgilauda ruficollis].
ACCESSION   XP_041321975
VERSION     XP_041321975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="transcription factor MafG"
                     /calculated_mol_wt=17888
     Region          46..115
                     /region_name="bZIP_Maf_small"
                     /note="Basic leucine zipper (bZIP) domain of small
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14717"
                     /db_xref="CDD:269865"
     Region          46..115
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269865"
     Site            order(56..58,60..62,64..65,68..69,71..72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269865"
     Site            order(72,75..76,79..80,82..83,86..87,89..90,93,96..97,100,
                     103..104,107..108)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269865"
     CDS             1..162
                     /gene="MAFG"
                     /coded_by="XM_041466041.1:176..664"
                     /db_xref="GeneID:121352801"
ORIGIN      
        1 mttpnkgnka lkvkrepgen gtsltdeelv tmsvrelnqh lrglskeeii qlkqrrrtlk
       61 nrgyaascrv krvtqkeele kqkaelqqev eklasenasm kmeldalrsk yealqnfart
      121 varspvtpar gplassmgpl vpgkvattsv itivksktda rs
//
LOCUS       XP_041321977             162 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor MafG [Pyrgilauda ruficollis].
ACCESSION   XP_041321977
VERSION     XP_041321977.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466043.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="transcription factor MafG"
                     /calculated_mol_wt=17888
     Region          46..115
                     /region_name="bZIP_Maf_small"
                     /note="Basic leucine zipper (bZIP) domain of small
                     musculoaponeurotic fibrosarcoma (Maf) proteins: a
                     DNA-binding and dimerization domain; cd14717"
                     /db_xref="CDD:269865"
     Region          46..115
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269865"
     Site            order(56..58,60..62,64..65,68..69,71..72)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269865"
     Site            order(72,75..76,79..80,82..83,86..87,89..90,93,96..97,100,
                     103..104,107..108)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269865"
     CDS             1..162
                     /gene="MAFG"
                     /coded_by="XM_041466043.1:46..534"
                     /db_xref="GeneID:121352801"
ORIGIN      
        1 mttpnkgnka lkvkrepgen gtsltdeelv tmsvrelnqh lrglskeeii qlkqrrrtlk
       61 nrgyaascrv krvtqkeele kqkaelqqev eklasenasm kmeldalrsk yealqnfart
      121 varspvtpar gplassmgpl vpgkvattsv itivksktda rs
//
LOCUS       XP_041321978              82 aa            linear   VRT 06-MAY-2021
DEFINITION  centromere protein X isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041321978
VERSION     XP_041321978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..82
                     /product="centromere protein X isoform X1"
                     /calculated_mol_wt=9120
     Region          11..82
                     /region_name="HFD_CENP-X"
                     /note="histone-fold domain found in centromere protein X
                     (CENP-X) and similar proteins; cd22921"
                     /db_xref="CDD:467046"
     Site            order(11..12,14..15,18..20,22..25,28..32,34..35,37..39,
                     41..48,50..52,56,59,64..68,71,75,79,81..82)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467046"
     Site            order(25,80..82)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:467046"
     CDS             1..82
                     /gene="CENPX"
                     /coded_by="XM_041466044.1:55..303"
                     /db_xref="GeneID:121352802"
ORIGIN      
        1 meergggagd frkntvdrll rlnfrdgrtr vnaeaqllvg ellkvfvrea aaraarqaqa
       61 edlkkvdteq vekvlpqlll df
//
LOCUS       XP_041321979              81 aa            linear   VRT 06-MAY-2021
DEFINITION  centromere protein X isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041321979
VERSION     XP_041321979.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466045.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..81
                     /product="centromere protein X isoform X2"
                     /calculated_mol_wt=8991
     Region          11..81
                     /region_name="HFD_CENP-X"
                     /note="histone-fold domain found in centromere protein X
                     (CENP-X) and similar proteins; cd22921"
                     /db_xref="CDD:467046"
     Site            order(11..12,14..15,18..20,22..25,28..32,34..35,37..39,
                     41..48,50..52,55,58,63..67,70,74,78,80..81)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467046"
     Site            order(25,79..81)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:467046"
     CDS             1..81
                     /gene="CENPX"
                     /coded_by="XM_041466045.1:55..300"
                     /db_xref="GeneID:121352802"
ORIGIN      
        1 meergggagd frkntvdrll rlnfrdgrtr vnaeaqllvg ellkvfvraa araarqaqae
       61 dlkkvdteqv ekvlpqllld f
//
LOCUS       XP_041321980              77 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 11 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321980
VERSION     XP_041321980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..77
                     /product="anaphase-promoting complex subunit 11 isoform
                     X1"
                     /calculated_mol_wt=8445
     Region          1..77
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(23,26,42,45,48,66,69)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..77
                     /gene="ANAPC11"
                     /coded_by="XM_041466046.1:110..343"
                     /db_xref="GeneID:121352803"
ORIGIN      
        1 mrvrvrswhg vaswlwvand encgicrmaf ngccpdceyg tgtgtghcal ggadgvsvpq
       61 qvqqhcpmcr qewkfre
//
LOCUS       XP_041321981              84 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 11 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041321981
VERSION     XP_041321981.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466047.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="anaphase-promoting complex subunit 11 isoform
                     X2"
                     /calculated_mol_wt=9793
     Region          1..84
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(25..27,31,35..36,38,42,48,62)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:438120"
     CDS             1..84
                     /gene="ANAPC11"
                     /coded_by="XM_041466047.1:95..349"
                     /db_xref="GeneID:121352803"
ORIGIN      
        1 mrvrvrswhg vaswlwvand encgicrmaf ngccpdckvp gddcplvwgq cshcfhmhci
       61 lkwlnsqqvq qhcpmcrqew kfre
//
LOCUS       XP_041321982            2163 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321982
VERSION     XP_041321982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2163
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X1"
                     /calculated_mol_wt=239188
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1679..1712
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1928..1976
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1936,1942..1946,1964..1967)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1951..>2011
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2060..2156
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2084,2089,2092,2131,2135,2141)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2163
                     /gene="BAZ2B"
                     /coded_by="XM_041466048.1:151..6642"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qqmktglpim glqfcgwptg vltsnvafps plpalgsglg
     1621 lseangnsfl assvpaskse spalqaekia sapstaaeva kpvdypnpkp ipeemqygww
     1681 ritdpedlks llkvlhlrgi rekalqkqiq khmdyitlac iknkdvaiid inenednqvt
     1741 rdvvenwsve eqamemdlai lqqvedlerr vasaslqvkg wlcpepaser ddlvyrehks
     1801 itrlhkkhdg dcagggegna sslerrsdnp ldiavtrlad lernierryl ksplsttiqi
     1861 kldnvgtvtv papapsisgd gdgteediap glrvwrrals earsaaqval ciqqlqksia
     1921 weksimkvyc qicrkgdnee llllcdgcdk gchtychrpk istipdgdwf cpaciakasg
     1981 qtlkikklqm kgkksneqkr srklageted edsattsval krgktdpkkr kmdenvcvsq
     2041 lkqetctavk kpkrdgdskd laicsmilse lethedawpf llpvnlklvp gykkvikkpm
     2101 dfstirdkls sgqypnleaf sldvrlvfdn cetfneddsd igraghnmrk yfekkwteif
     2161 kvs
//
LOCUS       XP_041321984            2163 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321984
VERSION     XP_041321984.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466050.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2163
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X1"
                     /calculated_mol_wt=239188
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1679..1712
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1928..1976
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1936,1942..1946,1964..1967)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1951..>2011
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2060..2156
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2084,2089,2092,2131,2135,2141)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2163
                     /gene="BAZ2B"
                     /coded_by="XM_041466050.1:104..6595"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qqmktglpim glqfcgwptg vltsnvafps plpalgsglg
     1621 lseangnsfl assvpaskse spalqaekia sapstaaeva kpvdypnpkp ipeemqygww
     1681 ritdpedlks llkvlhlrgi rekalqkqiq khmdyitlac iknkdvaiid inenednqvt
     1741 rdvvenwsve eqamemdlai lqqvedlerr vasaslqvkg wlcpepaser ddlvyrehks
     1801 itrlhkkhdg dcagggegna sslerrsdnp ldiavtrlad lernierryl ksplsttiqi
     1861 kldnvgtvtv papapsisgd gdgteediap glrvwrrals earsaaqval ciqqlqksia
     1921 weksimkvyc qicrkgdnee llllcdgcdk gchtychrpk istipdgdwf cpaciakasg
     1981 qtlkikklqm kgkksneqkr srklageted edsattsval krgktdpkkr kmdenvcvsq
     2041 lkqetctavk kpkrdgdskd laicsmilse lethedawpf llpvnlklvp gykkvikkpm
     2101 dfstirdkls sgqypnleaf sldvrlvfdn cetfneddsd igraghnmrk yfekkwteif
     2161 kvs
//
LOCUS       XP_041321985            2163 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321985
VERSION     XP_041321985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466051.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2163
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X1"
                     /calculated_mol_wt=239188
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1679..1712
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1928..1976
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1936,1942..1946,1964..1967)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1951..>2011
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2060..2156
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2084,2089,2092,2131,2135,2141)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2163
                     /gene="BAZ2B"
                     /coded_by="XM_041466051.1:81..6572"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qqmktglpim glqfcgwptg vltsnvafps plpalgsglg
     1621 lseangnsfl assvpaskse spalqaekia sapstaaeva kpvdypnpkp ipeemqygww
     1681 ritdpedlks llkvlhlrgi rekalqkqiq khmdyitlac iknkdvaiid inenednqvt
     1741 rdvvenwsve eqamemdlai lqqvedlerr vasaslqvkg wlcpepaser ddlvyrehks
     1801 itrlhkkhdg dcagggegna sslerrsdnp ldiavtrlad lernierryl ksplsttiqi
     1861 kldnvgtvtv papapsisgd gdgteediap glrvwrrals earsaaqval ciqqlqksia
     1921 weksimkvyc qicrkgdnee llllcdgcdk gchtychrpk istipdgdwf cpaciakasg
     1981 qtlkikklqm kgkksneqkr srklageted edsattsval krgktdpkkr kmdenvcvsq
     2041 lkqetctavk kpkrdgdskd laicsmilse lethedawpf llpvnlklvp gykkvikkpm
     2101 dfstirdkls sgqypnleaf sldvrlvfdn cetfneddsd igraghnmrk yfekkwteif
     2161 kvs
//
LOCUS       XP_041321986            2163 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321986
VERSION     XP_041321986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2163
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X1"
                     /calculated_mol_wt=239188
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1679..1712
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1928..1976
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1936,1942..1946,1964..1967)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1951..>2011
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2060..2156
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2084,2089,2092,2131,2135,2141)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2163
                     /gene="BAZ2B"
                     /coded_by="XM_041466052.1:83..6574"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qqmktglpim glqfcgwptg vltsnvafps plpalgsglg
     1621 lseangnsfl assvpaskse spalqaekia sapstaaeva kpvdypnpkp ipeemqygww
     1681 ritdpedlks llkvlhlrgi rekalqkqiq khmdyitlac iknkdvaiid inenednqvt
     1741 rdvvenwsve eqamemdlai lqqvedlerr vasaslqvkg wlcpepaser ddlvyrehks
     1801 itrlhkkhdg dcagggegna sslerrsdnp ldiavtrlad lernierryl ksplsttiqi
     1861 kldnvgtvtv papapsisgd gdgteediap glrvwrrals earsaaqval ciqqlqksia
     1921 weksimkvyc qicrkgdnee llllcdgcdk gchtychrpk istipdgdwf cpaciakasg
     1981 qtlkikklqm kgkksneqkr srklageted edsattsval krgktdpkkr kmdenvcvsq
     2041 lkqetctavk kpkrdgdskd laicsmilse lethedawpf llpvnlklvp gykkvikkpm
     2101 dfstirdkls sgqypnleaf sldvrlvfdn cetfneddsd igraghnmrk yfekkwteif
     2161 kvs
//
LOCUS       XP_041321987            2162 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321987
VERSION     XP_041321987.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466053.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2162
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X2"
                     /calculated_mol_wt=239060
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1678..1711
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1927..1975
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1935,1941..1945,1963..1966)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1950..>2010
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2059..2155
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2083,2088,2091,2130,2134,2140)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2162
                     /gene="BAZ2B"
                     /coded_by="XM_041466053.1:151..6639"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qmktglpimg lqfcgwptgv ltsnvafpsp lpalgsglgl
     1621 seangnsfla ssvpaskses palqaekias apstaaevak pvdypnpkpi peemqygwwr
     1681 itdpedlksl lkvlhlrgir ekalqkqiqk hmdyitlaci knkdvaiidi nenednqvtr
     1741 dvvenwsvee qamemdlail qqvedlerrv asaslqvkgw lcpepaserd dlvyrehksi
     1801 trlhkkhdgd cagggegnas slerrsdnpl diavtrladl ernierrylk splsttiqik
     1861 ldnvgtvtvp apapsisgdg dgteediapg lrvwrralse arsaaqvalc iqqlqksiaw
     1921 eksimkvycq icrkgdneel lllcdgcdkg chtychrpki stipdgdwfc paciakasgq
     1981 tlkikklqmk gkksneqkrs rklagetede dsattsvalk rgktdpkkrk mdenvcvsql
     2041 kqetctavkk pkrdgdskdl aicsmilsel ethedawpfl lpvnlklvpg ykkvikkpmd
     2101 fstirdklss gqypnleafs ldvrlvfdnc etfneddsdi graghnmrky fekkwteifk
     2161 vs
//
LOCUS       XP_041321988            2161 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321988
VERSION     XP_041321988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466054.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2161
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X3"
                     /calculated_mol_wt=238903
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          <830..>1010
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          1042..1104
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1145..1185
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1325..>1357
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1677..1710
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1926..1974
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1934,1940..1944,1962..1965)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1949..>2009
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2058..2154
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2082,2087,2090,2129,2133,2139)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2161
                     /gene="BAZ2B"
                     /coded_by="XM_041466054.1:151..6636"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmerer
      961 rrqhmmlmka mearkkaeek erlkqekrde krlnkerkle qrrlelemak elkkpnedmc
     1021 ladqkpfpel pripglvldg stfsdclmvv qflrnfgkvl gfdvtidvps lsvlqeglln
     1081 igdsmgevqd llvklvsaav cdpglgtgyk aktilgehll nvginrdnvs eilqifmeah
     1141 cgqteltesl ktkafqahsp aqkasvlafl vnelacsksv vseidknidy msnlrrdkwm
     1201 vegklrklri ihakktgkrd aagsgdggee ahsletpapg rkrrrkggds dyddddddds
     1261 ddqadedded eedkddkkgk kaevcddedd gdqtasveel ekqiekltkq qsqyrkklfe
     1321 ashclrsmmf gqdryrrryw ilpqcggifv egmesgegle eiakekeklk keesmhikee
     1381 efeseeklhc latthceqke nlkekdstnl flqkpgsfsk lskllevakm ppesdtmspk
     1441 pngsaangct lsypsnskns lcslqppasq ssieksesnn lfspnasgtg kfyssplipn
     1501 dqllktltek srqwfsllpr vpcddtsvth vdtpattapl tpqshppsns pspvpsplls
     1561 stsaqspmgl spfalsplqq mktglpimgl qfcgwptgvl tsnvafpspl palgsglgls
     1621 eangnsflas svpasksesp alqaekiasa pstaaevakp vdypnpkpip eemqygwwri
     1681 tdpedlksll kvlhlrgire kalqkqiqkh mdyitlacik nkdvaiidin enednqvtrd
     1741 vvenwsveeq amemdlailq qvedlerrva saslqvkgwl cpepaserdd lvyrehksit
     1801 rlhkkhdgdc agggegnass lerrsdnpld iavtrladle rnierrylks plsttiqikl
     1861 dnvgtvtvpa papsisgdgd gteediapgl rvwrralsea rsaaqvalci qqlqksiawe
     1921 ksimkvycqi crkgdneell llcdgcdkgc htychrpkis tipdgdwfcp aciakasgqt
     1981 lkikklqmkg kksneqkrsr klageteded sattsvalkr gktdpkkrkm denvcvsqlk
     2041 qetctavkkp krdgdskdla icsmilsele thedawpfll pvnlklvpgy kkvikkpmdf
     2101 stirdklssg qypnleafsl dvrlvfdnce tfneddsdig raghnmrkyf ekkwteifkv
     2161 s
//
LOCUS       XP_041321989            2160 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321989
VERSION     XP_041321989.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466055.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2160
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X4"
                     /calculated_mol_wt=238775
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          <830..>1010
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          1042..1104
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1145..1185
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1325..>1357
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1676..1709
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1925..1973
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1933,1939..1943,1961..1964)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1948..>2008
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2057..2153
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2081,2086,2089,2128,2132,2138)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2160
                     /gene="BAZ2B"
                     /coded_by="XM_041466055.1:151..6633"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmerer
      961 rrqhmmlmka mearkkaeek erlkqekrde krlnkerkle qrrlelemak elkkpnedmc
     1021 ladqkpfpel pripglvldg stfsdclmvv qflrnfgkvl gfdvtidvps lsvlqeglln
     1081 igdsmgevqd llvklvsaav cdpglgtgyk aktilgehll nvginrdnvs eilqifmeah
     1141 cgqteltesl ktkafqahsp aqkasvlafl vnelacsksv vseidknidy msnlrrdkwm
     1201 vegklrklri ihakktgkrd aagsgdggee ahsletpapg rkrrrkggds dyddddddds
     1261 ddqadedded eedkddkkgk kaevcddedd gdqtasveel ekqiekltkq qsqyrkklfe
     1321 ashclrsmmf gqdryrrryw ilpqcggifv egmesgegle eiakekeklk keesmhikee
     1381 efeseeklhc latthceqke nlkekdstnl flqkpgsfsk lskllevakm ppesdtmspk
     1441 pngsaangct lsypsnskns lcslqppasq ssieksesnn lfspnasgtg kfyssplipn
     1501 dqllktltek srqwfsllpr vpcddtsvth vdtpattapl tpqshppsns pspvpsplls
     1561 stsaqspmgl spfalsplqm ktglpimglq fcgwptgvlt snvafpsplp algsglglse
     1621 angnsflass vpasksespa lqaekiasap staaevakpv dypnpkpipe emqygwwrit
     1681 dpedlksllk vlhlrgirek alqkqiqkhm dyitlacikn kdvaiidine nednqvtrdv
     1741 venwsveeqa memdlailqq vedlerrvas aslqvkgwlc pepaserddl vyrehksitr
     1801 lhkkhdgdca gggegnassl errsdnpldi avtrladler nierrylksp lsttiqikld
     1861 nvgtvtvpap apsisgdgdg teediapglr vwrralsear saaqvalciq qlqksiawek
     1921 simkvycqic rkgdneelll lcdgcdkgch tychrpkist ipdgdwfcpa ciakasgqtl
     1981 kikklqmkgk ksneqkrsrk lagetededs attsvalkrg ktdpkkrkmd envcvsqlkq
     2041 etctavkkpk rdgdskdlai csmilselet hedawpfllp vnlklvpgyk kvikkpmdfs
     2101 tirdklssgq ypnleafsld vrlvfdncet fneddsdigr aghnmrkyfe kkwteifkvs
//
LOCUS       XP_041321990            2159 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321990
VERSION     XP_041321990.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466056.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2159
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X5"
                     /calculated_mol_wt=238790
     Region          684..756
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(696,698,700,707,709,718,721,725)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          837..>1012
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1040..1102
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1143..1183
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1323..>1355
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1675..1708
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1924..1972
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1932,1938..1942,1960..1963)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1947..>2007
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2056..2152
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2080,2085,2088,2127,2131,2137)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2159
                     /gene="BAZ2B"
                     /coded_by="XM_041466056.1:151..6630"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psiskrrrva derelrvpld ygwqretrir nfggrlqgev ayfapcgkkl
      721 rqypevvkyl srngimdisr dnfsfsakig vgdfyeardg pqgvqwcllk eeeviprira
      781 megrrgrppn pdrqhsrees rsrrrkgrpp nvgsgeflds adtkllrklq aqeiarqaaq
      841 ikllrklqkq eqaraakeak kqqaimaaee krkqkeqiki mkqqekikri qqirmekelr
      901 aqqileakkk kkeeaanakl leaekrikek emrrqqavll khqelerhrl dmvwererrr
      961 qhmmlmkame arkkaeeker lkqekrdekr lnkerkleqr rlelemakel kkpnedmcla
     1021 dqkpfpelpr ipglvldgst fsdclmvvqf lrnfgkvlgf dvtidvpsls vlqegllnig
     1081 dsmgevqdll vklvsaavcd pglgtgykak tilgehllnv ginrdnvsei lqifmeahcg
     1141 qtelteslkt kafqahspaq kasvlaflvn elacsksvvs eidknidyms nlrrdkwmve
     1201 gklrklriih akktgkrdaa gsgdggeeah sletpapgrk rrrkggdsdy dddddddsdd
     1261 qadeddedee dkddkkgkka evcddeddgd qtasveelek qiekltkqqs qyrkklfeas
     1321 hclrsmmfgq dryrrrywil pqcggifveg mesgegleei akekeklkke esmhikeeef
     1381 eseeklhcla tthceqkenl kekdstnlfl qkpgsfskls kllevakmpp esdtmspkpn
     1441 gsaangctls ypsnsknslc slqppasqss ieksesnnlf spnasgtgkf yssplipndq
     1501 llktlteksr qwfsllprvp cddtsvthvd tpattapltp qshppsnsps pvpspllsst
     1561 saqspmglsp falsplqqmk tglpimglqf cgwptgvlts nvafpsplpa lgsglglsea
     1621 ngnsflassv pasksespal qaekiasaps taaevakpvd ypnpkpipee mqygwwritd
     1681 pedlksllkv lhlrgireka lqkqiqkhmd yitlaciknk dvaiidinen ednqvtrdvv
     1741 enwsveeqam emdlailqqv edlerrvasa slqvkgwlcp epaserddlv yrehksitrl
     1801 hkkhdgdcag ggegnassle rrsdnpldia vtrladlern ierrylkspl sttiqikldn
     1861 vgtvtvpapa psisgdgdgt eediapglrv wrralsears aaqvalciqq lqksiaweks
     1921 imkvycqicr kgdneellll cdgcdkgcht ychrpkisti pdgdwfcpac iakasgqtlk
     1981 ikklqmkgkk sneqkrsrkl agetededsa ttsvalkrgk tdpkkrkmde nvcvsqlkqe
     2041 tctavkkpkr dgdskdlaic smilseleth edawpfllpv nlklvpgykk vikkpmdfst
     2101 irdklssgqy pnleafsldv rlvfdncetf neddsdigra ghnmrkyfek kwteifkvs
//
LOCUS       XP_041321991            2129 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321991
VERSION     XP_041321991.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466057.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2129
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X6"
                     /calculated_mol_wt=235379
     Region          688..757
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          807..>982
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1010..1072
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1113..1153
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1293..>1325
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1645..1678
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1894..1942
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1902,1908..1912,1930..1933)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1917..>1977
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2026..2122
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2050,2055,2058,2097,2101,2107)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2129
                     /gene="BAZ2B"
                     /coded_by="XM_041466057.1:151..6540"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkgvqwcllk eeeviprira megrrgrppn pdrqhsrees rsrrrkgrpp
      781 nvgsgeflds adtkllrklq aqeiarqaaq ikllrklqkq eqaraakeak kqqaimaaee
      841 krkqkeqiki mkqqekikri qqirmekelr aqqileakkk kkeeaanakl leaekrikek
      901 emrrqqavll khqelerhrl dmvwererrr qhmmlmkame arkkaeeker lkqekrdekr
      961 lnkerkleqr rlelemakel kkpnedmcla dqkpfpelpr ipglvldgst fsdclmvvqf
     1021 lrnfgkvlgf dvtidvpsls vlqegllnig dsmgevqdll vklvsaavcd pglgtgykak
     1081 tilgehllnv ginrdnvsei lqifmeahcg qtelteslkt kafqahspaq kasvlaflvn
     1141 elacsksvvs eidknidyms nlrrdkwmve gklrklriih akktgkrdaa gsgdggeeah
     1201 sletpapgrk rrrkggdsdy dddddddsdd qadeddedee dkddkkgkka evcddeddgd
     1261 qtasveelek qiekltkqqs qyrkklfeas hclrsmmfgq dryrrrywil pqcggifveg
     1321 mesgegleei akekeklkke esmhikeeef eseeklhcla tthceqkenl kekdstnlfl
     1381 qkpgsfskls kllevakmpp esdtmspkpn gsaangctls ypsnsknslc slqppasqss
     1441 ieksesnnlf spnasgtgkf yssplipndq llktlteksr qwfsllprvp cddtsvthvd
     1501 tpattapltp qshppsnsps pvpspllsst saqspmglsp falsplqqmk tglpimglqf
     1561 cgwptgvlts nvafpsplpa lgsglglsea ngnsflassv pasksespal qaekiasaps
     1621 taaevakpvd ypnpkpipee mqygwwritd pedlksllkv lhlrgireka lqkqiqkhmd
     1681 yitlaciknk dvaiidinen ednqvtrdvv enwsveeqam emdlailqqv edlerrvasa
     1741 slqvkgwlcp epaserddlv yrehksitrl hkkhdgdcag ggegnassle rrsdnpldia
     1801 vtrladlern ierrylkspl sttiqikldn vgtvtvpapa psisgdgdgt eediapglrv
     1861 wrralsears aaqvalciqq lqksiaweks imkvycqicr kgdneellll cdgcdkgcht
     1921 ychrpkisti pdgdwfcpac iakasgqtlk ikklqmkgkk sneqkrsrkl agetededsa
     1981 ttsvalkrgk tdpkkrkmde nvcvsqlkqe tctavkkpkr dgdskdlaic smilseleth
     2041 edawpfllpv nlklvpgykk vikkpmdfst irdklssgqy pnleafsldv rlvfdncetf
     2101 neddsdigra ghnmrkyfek kwteifkvs
//
LOCUS       XP_041321992            2128 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321992
VERSION     XP_041321992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2128
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X7"
                     /calculated_mol_wt=235694
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1679..1712
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1893..1941
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1901,1907..1911,1929..1932)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1916..>1976
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2025..2121
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2049,2054,2057,2096,2100,2106)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2128
                     /gene="BAZ2B"
                     /coded_by="XM_041466058.1:151..6537"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qqmktglpim glqfcgwptg vltsnvafps plpalgsglg
     1621 lseangnsfl assvpaskse spalqaekia sapstaaeva kpvdypnpkp ipeemqygww
     1681 ritdpedlks llkvlhlrgi rekalqkqiq khmdyitlac iknkdvaiid inenednqvt
     1741 rdvvenwsve eqamemdlai lqqvedlerr vasaslqvkg wlcpepaser ddlvyrehks
     1801 itrlhkkhdg dcagggegna sslerrsdnp ldiavtrlad lernierrte ediapglrvw
     1861 rralsearsa aqvalciqql qksiaweksi mkvycqicrk gdneellllc dgcdkgchty
     1921 chrpkistip dgdwfcpaci akasgqtlki kklqmkgkks neqkrsrkla getededsat
     1981 tsvalkrgkt dpkkrkmden vcvsqlkqet ctavkkpkrd gdskdlaics milselethe
     2041 dawpfllpvn lklvpgykkv ikkpmdfsti rdklssgqyp nleafsldvr lvfdncetfn
     2101 eddsdigrag hnmrkyfekk wteifkvs
//
LOCUS       XP_041321993            2127 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321993
VERSION     XP_041321993.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466059.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2127
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X8"
                     /calculated_mol_wt=235094
     Region          688..757
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          <796..>976
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          1008..1070
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1111..1151
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1291..>1323
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1643..1676
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1892..1940
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1900,1906..1910,1928..1931)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1915..>1975
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2024..2120
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2048,2053,2056,2095,2099,2105)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2127
                     /gene="BAZ2B"
                     /coded_by="XM_041466059.1:151..6534"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkgvqwcllk eeeviprira megrrgrppn pdrqhsrees rsrrrkgrpp
      781 nvgsgeflds adtkllrklq aqeiarqaaq ikllrklqkq eqaraakeak kqqaimaaee
      841 krkqkeqiki mkqqekikri qqirmekelr aqqileakkk kkeeaanakl leaekrikek
      901 emrrqqavll khqelerhrl dmererrrqh mmlmkamear kkaeekerlk qekrdekrln
      961 kerkleqrrl elemakelkk pnedmcladq kpfpelprip glvldgstfs dclmvvqflr
     1021 nfgkvlgfdv tidvpslsvl qegllnigds mgevqdllvk lvsaavcdpg lgtgykakti
     1081 lgehllnvgi nrdnvseilq ifmeahcgqt elteslktka fqahspaqka svlaflvnel
     1141 acsksvvsei dknidymsnl rrdkwmvegk lrklriihak ktgkrdaags gdggeeahsl
     1201 etpapgrkrr rkggdsdydd dddddsddqa deddedeedk ddkkgkkaev cddeddgdqt
     1261 asveelekqi ekltkqqsqy rkklfeashc lrsmmfgqdr yrrrywilpq cggifvegme
     1321 sgegleeiak ekeklkkees mhikeeefes eeklhclatt hceqkenlke kdstnlflqk
     1381 pgsfsklskl levakmppes dtmspkpngs aangctlsyp snsknslcsl qppasqssie
     1441 ksesnnlfsp nasgtgkfys splipndqll ktlteksrqw fsllprvpcd dtsvthvdtp
     1501 attapltpqs hppsnspspv pspllsstsa qspmglspfa lsplqqmktg lpimglqfcg
     1561 wptgvltsnv afpsplpalg sglglseang nsflassvpa sksespalqa ekiasapsta
     1621 aevakpvdyp npkpipeemq ygwwritdpe dlksllkvlh lrgirekalq kqiqkhmdyi
     1681 tlaciknkdv aiidinened nqvtrdvven wsveeqamem dlailqqved lerrvasasl
     1741 qvkgwlcpep aserddlvyr ehksitrlhk khdgdcaggg egnasslerr sdnpldiavt
     1801 rladlernie rrylksplst tiqikldnvg tvtvpapaps isgdgdgtee diapglrvwr
     1861 ralsearsaa qvalciqqlq ksiaweksim kvycqicrkg dneellllcd gcdkgchtyc
     1921 hrpkistipd gdwfcpacia kasgqtlkik klqmkgkksn eqkrsrklag etededsatt
     1981 svalkrgktd pkkrkmdenv cvsqlkqetc tavkkpkrdg dskdlaicsm ilselethed
     2041 awpfllpvnl klvpgykkvi kkpmdfstir dklssgqypn leafsldvrl vfdncetfne
     2101 ddsdigragh nmrkyfekkw teifkvs
//
LOCUS       XP_041321995            2127 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321995
VERSION     XP_041321995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2127
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X9"
                     /calculated_mol_wt=235565
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1678..1711
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1892..1940
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1900,1906..1910,1928..1931)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1915..>1975
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2024..2120
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2048,2053,2056,2095,2099,2105)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2127
                     /gene="BAZ2B"
                     /coded_by="XM_041466061.1:151..6534"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qmktglpimg lqfcgwptgv ltsnvafpsp lpalgsglgl
     1621 seangnsfla ssvpaskses palqaekias apstaaevak pvdypnpkpi peemqygwwr
     1681 itdpedlksl lkvlhlrgir ekalqkqiqk hmdyitlaci knkdvaiidi nenednqvtr
     1741 dvvenwsvee qamemdlail qqvedlerrv asaslqvkgw lcpepaserd dlvyrehksi
     1801 trlhkkhdgd cagggegnas slerrsdnpl diavtrladl ernierrtee diapglrvwr
     1861 ralsearsaa qvalciqqlq ksiaweksim kvycqicrkg dneellllcd gcdkgchtyc
     1921 hrpkistipd gdwfcpacia kasgqtlkik klqmkgkksn eqkrsrklag etededsatt
     1981 svalkrgktd pkkrkmdenv cvsqlkqetc tavkkpkrdg dskdlaicsm ilselethed
     2041 awpfllpvnl klvpgykkvi kkpmdfstir dklssgqypn leafsldvrl vfdncetfne
     2101 ddsdigragh nmrkyfekkw teifkvs
//
LOCUS       XP_041321996            2091 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321996
VERSION     XP_041321996.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466062.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2091
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X10"
                     /calculated_mol_wt=231471
     Region          688..757
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          <796..>976
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          1008..1070
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1111..1151
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1291..>1323
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1642..1675
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1856..1904
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1864,1870..1874,1892..1895)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1879..>1939
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          1988..2084
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2012,2017,2020,2059,2063,2069)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2091
                     /gene="BAZ2B"
                     /coded_by="XM_041466062.1:151..6426"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkgvqwcllk eeeviprira megrrgrppn pdrqhsrees rsrrrkgrpp
      781 nvgsgeflds adtkllrklq aqeiarqaaq ikllrklqkq eqaraakeak kqqaimaaee
      841 krkqkeqiki mkqqekikri qqirmekelr aqqileakkk kkeeaanakl leaekrikek
      901 emrrqqavll khqelerhrl dmererrrqh mmlmkamear kkaeekerlk qekrdekrln
      961 kerkleqrrl elemakelkk pnedmcladq kpfpelprip glvldgstfs dclmvvqflr
     1021 nfgkvlgfdv tidvpslsvl qegllnigds mgevqdllvk lvsaavcdpg lgtgykakti
     1081 lgehllnvgi nrdnvseilq ifmeahcgqt elteslktka fqahspaqka svlaflvnel
     1141 acsksvvsei dknidymsnl rrdkwmvegk lrklriihak ktgkrdaags gdggeeahsl
     1201 etpapgrkrr rkggdsdydd dddddsddqa deddedeedk ddkkgkkaev cddeddgdqt
     1261 asveelekqi ekltkqqsqy rkklfeashc lrsmmfgqdr yrrrywilpq cggifvegme
     1321 sgegleeiak ekeklkkees mhikeeefes eeklhclatt hceqkenlke kdstnlflqk
     1381 pgsfsklskl levakmppes dtmspkpngs aangctlsyp snsknslcsl qppasqssie
     1441 ksesnnlfsp nasgtgkfys splipndqll ktlteksrqw fsllprvpcd dtsvthvdtp
     1501 attapltpqs hppsnspspv pspllsstsa qspmglspfa lsplqmktgl pimglqfcgw
     1561 ptgvltsnva fpsplpalgs glglseangn sflassvpas ksespalqae kiasapstaa
     1621 evakpvdypn pkpipeemqy gwwritdped lksllkvlhl rgirekalqk qiqkhmdyit
     1681 laciknkdva iidinenedn qvtrdvvenw sveeqamemd lailqqvedl errvasaslq
     1741 vkgwlcpepa serddlvyre hksitrlhkk hdgdcaggge gnasslerrs dnpldiavtr
     1801 ladlernier rteediapgl rvwrralsea rsaaqvalci qqlqksiawe ksimkvycqi
     1861 crkgdneell llcdgcdkgc htychrpkis tipdgdwfcp aciakasgqt lkikklqmkg
     1921 kksneqkrsr klageteded sattsvalkr gktdpkkrkm denvcvsqlk qetctavkkp
     1981 krdgdskdla icsmilsele thedawpfll pvnlklvpgy kkvikkpmdf stirdklssg
     2041 qypnleafsl dvrlvfdnce tfneddsdig raghnmrkyf ekkwteifkv s
//
LOCUS       XP_041321997            2020 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321997
VERSION     XP_041321997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466063.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2020
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X11"
                     /calculated_mol_wt=224121
     Region          545..617
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(557,559,561,568,570,579,582,586)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          698..>873
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          901..963
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1004..1044
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1184..>1216
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1536..1569
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1785..1833
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1793,1799..1803,1821..1824)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1808..>1868
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          1917..2013
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(1941,1946,1949,1988,1992,1998)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2020
                     /gene="BAZ2B"
                     /coded_by="XM_041466063.1:151..6213"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allesdsnse sdtegseeed deddkdqdes dtdtegekap lklnktsssv
      481 ksssigltah stplnlqvak tsssapaalc pesqpavflg tgastltpst hcgiskrrrv
      541 aderelrvpl dygwqretri rnfggrlqge vayfapcgkk lrqypevvky lsrngimdis
      601 rdnfsfsaki gvgdfyeard gpqgvqwcll keeeviprir amegrrgrpp npdrqhsree
      661 srsrrrkgrp pnvgsgefld sadtkllrkl qaqeiarqaa qikllrklqk qeqaraakea
      721 kkqqaimaae ekrkqkeqik imkqqekikr iqqirmekel raqqileakk kkkeeaanak
      781 lleaekrike kemrrqqavl lkhqelerhr ldmvwererr rqhmmlmkam earkkaeeke
      841 rlkqekrdek rlnkerkleq rrlelemake lkkpnedmcl adqkpfpelp ripglvldgs
      901 tfsdclmvvq flrnfgkvlg fdvtidvpsl svlqegllni gdsmgevqdl lvklvsaavc
      961 dpglgtgyka ktilgehlln vginrdnvse ilqifmeahc gqtelteslk tkafqahspa
     1021 qkasvlaflv nelacsksvv seidknidym snlrrdkwmv egklrklrii hakktgkrda
     1081 agsgdggeea hsletpapgr krrrkggdsd ydddddddsd dqadeddede edkddkkgkk
     1141 aevcddeddg dqtasveele kqiekltkqq sqyrkklfea shclrsmmfg qdryrrrywi
     1201 lpqcggifve gmesgeglee iakekeklkk eesmhikeee feseeklhcl atthceqken
     1261 lkekdstnlf lqkpgsfskl skllevakmp pesdtmspkp ngsaangctl sypsnsknsl
     1321 cslqppasqs sieksesnnl fspnasgtgk fyssplipnd qllktlteks rqwfsllprv
     1381 pcddtsvthv dtpattaplt pqshppsnsp spvpspllss tsaqspmgls pfalsplqqm
     1441 ktglpimglq fcgwptgvlt snvafpsplp algsglglse angnsflass vpasksespa
     1501 lqaekiasap staaevakpv dypnpkpipe emqygwwrit dpedlksllk vlhlrgirek
     1561 alqkqiqkhm dyitlacikn kdvaiidine nednqvtrdv venwsveeqa memdlailqq
     1621 vedlerrvas aslqvkgwlc pepaserddl vyrehksitr lhkkhdgdca gggegnassl
     1681 errsdnpldi avtrladler nierrylksp lsttiqikld nvgtvtvpap apsisgdgdg
     1741 teediapglr vwrralsear saaqvalciq qlqksiawek simkvycqic rkgdneelll
     1801 lcdgcdkgch tychrpkist ipdgdwfcpa ciakasgqtl kikklqmkgk ksneqkrsrk
     1861 lagetededs attsvalkrg ktdpkkrkmd envcvsqlkq etctavkkpk rdgdskdlai
     1921 csmilselet hedawpfllp vnlklvpgyk kvikkpmdfs tirdklssgq ypnleafsld
     1981 vrlvfdncet fneddsdigr aghnmrkyfe kkwteifkvs
//
LOCUS       XP_041321998            1981 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X12
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321998
VERSION     XP_041321998.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466064.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1981
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X12"
                     /calculated_mol_wt=218439
     Region          688..760
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          841..>1016
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1044..1106
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1147..1187
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1327..>1359
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1679..1712
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1928..1976
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1936,1942..1946,1964..1967)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     CDS             1..1981
                     /gene="BAZ2B"
                     /coded_by="XM_041466064.1:151..6096"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkylsrngim disrdnfsfs akigvgdfye ardgpqgvqw cllkeeevip
      781 riramegrrg rppnpdrqhs reesrsrrrk grppnvgsge fldsadtkll rklqaqeiar
      841 qaaqikllrk lqkqeqaraa keakkqqaim aaeekrkqke qikimkqqek ikriqqirme
      901 kelraqqile akkkkkeeaa naklleaekr ikekemrrqq avllkhqele rhrldmvwer
      961 errrqhmmlm kamearkkae ekerlkqekr dekrlnkerk leqrrlelem akelkkpned
     1021 mcladqkpfp elpripglvl dgstfsdclm vvqflrnfgk vlgfdvtidv pslsvlqegl
     1081 lnigdsmgev qdllvklvsa avcdpglgtg ykaktilgeh llnvginrdn vseilqifme
     1141 ahcgqtelte slktkafqah spaqkasvla flvnelacsk svvseidkni dymsnlrrdk
     1201 wmvegklrkl riihakktgk rdaagsgdgg eeahsletpa pgrkrrrkgg dsdydddddd
     1261 dsddqadedd edeedkddkk gkkaevcdde ddgdqtasve elekqieklt kqqsqyrkkl
     1321 feashclrsm mfgqdryrrr ywilpqcggi fvegmesgeg leeiakekek lkkeesmhik
     1381 eeefeseekl hclatthceq kenlkekdst nlflqkpgsf sklsklleva kmppesdtms
     1441 pkpngsaang ctlsypsnsk nslcslqppa sqssiekses nnlfspnasg tgkfysspli
     1501 pndqllktlt eksrqwfsll prvpcddtsv thvdtpatta pltpqshpps nspspvpspl
     1561 lsstsaqspm glspfalspl qqmktglpim glqfcgwptg vltsnvafps plpalgsglg
     1621 lseangnsfl assvpaskse spalqaekia sapstaaeva kpvdypnpkp ipeemqygww
     1681 ritdpedlks llkvlhlrgi rekalqkqiq khmdyitlac iknkdvaiid inenednqvt
     1741 rdvvenwsve eqamemdlai lqqvedlerr vasaslqvkg wlcpepaser ddlvyrehks
     1801 itrlhkkhdg dcagggegna sslerrsdnp ldiavtrlad lernierryl ksplsttiqi
     1861 kldnvgtvtv papapsisgd gdgteediap glrvwrrals earsaaqval ciqqlqksia
     1921 weksimkvyc qicrkgdnee llllcdgcdk gchtychrpk istipdgdwf cpaciaklsl
     1981 l
//
LOCUS       XP_041321999            2128 aa            linear   VRT 06-MAY-2021
DEFINITION  bromodomain adjacent to zinc finger domain protein 2B isoform X13
            [Pyrgilauda ruficollis].
ACCESSION   XP_041321999
VERSION     XP_041321999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466065.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2128
                     /product="bromodomain adjacent to zinc finger domain
                     protein 2B isoform X13"
                     /calculated_mol_wt=235251
     Region          688..757
                     /region_name="HAT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative chromatin remodelling factor such as BAZ2A; BAZ2A
                     contains a MBD, DDT, PHD-type zinc finger and Bromo domain
                     suggesting that BAZ2A might be associated with histone
                     acetyltransferase (HAT) activity. The...; cd01397"
                     /db_xref="CDD:238691"
     Site            order(700,702,704,711,713,722,725,729)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238691"
     Region          807..>982
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     Region          1010..1072
                     /region_name="DDT"
                     /note="domain in different transcription and chromosome
                     remodeling factors; smart00571"
                     /db_xref="CDD:214726"
     Region          1113..1153
                     /region_name="WHIM1"
                     /note="WSTF, HB1, Itc1p, MBD9 motif 1; pfam15612"
                     /db_xref="CDD:464774"
     Region          1293..>1325
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          <1644..1677
                     /region_name="WSD"
                     /note="Williams-Beuren syndrome DDT (WSD), D-TOX E motif;
                     pfam15613"
                     /db_xref="CDD:464775"
     Region          1893..1941
                     /region_name="PHD_BAZ2B"
                     /note="PHD finger found in bromodomain adjacent to zinc
                     finger domain protein 2B (BAZ2B); cd15630"
                     /db_xref="CDD:277100"
     Site            order(1901,1907..1911,1929..1932)
                     /site_type="other"
                     /note="H3 histone binding site [polypeptide binding]"
                     /db_xref="CDD:277100"
     Region          1916..>1976
                     /region_name="BAH"
                     /note="or Bromo Adjacent Homology domain (also called ELM1
                     and BAM for Bromo Adjacent Motif). BAH domains have first
                     been described as domains found in the polybromo protein
                     and Yeast Rsc1/Rsc2 (Remodeling of the Structure of
                     Chromatin). They also occur in...; cl02608"
                     /db_xref="CDD:470629"
     Region          2025..2121
                     /region_name="Bromo_BAZ2A_B_like"
                     /note="Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo
                     adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were
                     identified as a novel human bromodomain gene by cDNA
                     library screening. BAZ2A is also known as Tip5
                     (Transcription termination factor I-interacting...;
                     cd05503"
                     /db_xref="CDD:99935"
     Site            order(2049,2054,2057,2096,2100,2106)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99935"
     CDS             1..2128
                     /gene="BAZ2B"
                     /coded_by="XM_041466065.1:151..6537"
                     /db_xref="GeneID:121352805"
ORIGIN      
        1 mesgerltss svsstaaast passtpsvts evskgglssg aatlsstint cewwrtadth
       61 srpgaaffpp llgiptlfap paqnhdsasf hsratgkssr sntdkgmngs lngnstsavs
      121 alstsvlsts iatsagpvkn vtsgaggrky nqeqskvqll dtradkikdk kprkkavess
      181 snsdsdsgss sdtssegvss sdsddleede eeeeeedqsa eeseddesds eneahhkskn
      241 kvlmhsgvtd mktdgqksqd ksqekrthqq iplvsdsqth ssfqsqqkqp qvlsqqlpfi
      301 fqssqakees vnkhtsviqs tglvpnvkpl slvheakket ylklivpspd llkagsknts
      361 eesitltsdv rskreqykqt fpaqlkkqes skslkkviaa lsspkptsss pahqkltsle
      421 nnhsnpfltn allgnhqpng viqsviqeap lalttkqkaq tkinesvavs ssapfslpin
      481 lsacgkkpaa nrtavmpsts pvlpgsgkdk avsnnavnav kpqhrlhsak lvveqfrgvd
      541 sdapsskdsd dsndddddde dededdeedd sddsqsesds nsesdtegse eeddeddkdq
      601 desdtdtege kaplklnkts ssvksssigl tahstplnlq vaktsssapa alcpesqpav
      661 flgtgastlt psthcgiskr rrvaderelr vpldygwqre trirnfggrl qgevayfapc
      721 gkklrqypev vkgvqwcllk eeeviprira megrrgrppn pdrqhsrees rsrrrkgrpp
      781 nvgsgeflds adtkllrklq aqeiarqaaq ikllrklqkq eqaraakeak kqqaimaaee
      841 krkqkeqiki mkqqekikri qqirmekelr aqqileakkk kkeeaanakl leaekrikek
      901 emrrqqavll khqelerhrl dmvwererrr qhmmlmkame arkkaeeker lkqekrdekr
      961 lnkerkleqr rlelemakel kkpnedmcla dqkpfpelpr ipglvldgst fsdclmvvqf
     1021 lrnfgkvlgf dvtidvpsls vlqegllnig dsmgevqdll vklvsaavcd pglgtgykak
     1081 tilgehllnv ginrdnvsei lqifmeahcg qtelteslkt kafqahspaq kasvlaflvn
     1141 elacsksvvs eidknidyms nlrrdkwmve gklrklriih akktgkrdaa gsgdggeeah
     1201 sletpapgrk rrrkggdsdy dddddddsdd qadeddedee dkddkkgkka evcddeddgd
     1261 qtasveelek qiekltkqqs qyrkklfeas hclrsmmfgq dryrrrywil pqcggifveg
     1321 mesgegleei akekeklkke esmhikeeef eseeklhcla tthceqkenl kekdstnlfl
     1381 qkpgsfskls kllevakmpp esdtmspkpn gsaangctls ypsnsknslc slqppasqss
     1441 ieksesnnlf spnasgtgkf yssplipndq llktlteksr qwfsllprvp cddtsvthvd
     1501 tpattapltp qshppsnsps pvpspllsst saqspmglsp falsplqmkt glpimglqfc
     1561 gwptgvltsn vafpsplpal gsglglsean gnsflassvp asksespalq aekiasapst
     1621 aaevakpvdy pnpkpipeem qygwwritdp edlksllkvl hlrgirekal qkqiqkhmdy
     1681 itlaciknkd vaiidinene dnqvtrdvve nwsveeqame mdlailqqve dlerrvasas
     1741 lqvkgwlcpe paserddlvy rehksitrlh kkhdgdcagg gegnassler rsdnpldiav
     1801 trladlerni errylkspls ttiqikldnv gtvtvpapap sisgdgdgte ediapglrvw
     1861 rralsearsa aqvalciqql qksiaweksi mkvycqicrk gdneellllc dgcdkgchty
     1921 chrpkistip dgdwfcpaci akasgqtlki kklqmkgkks neqkrsrkla getededsat
     1981 tsvalkrgkt dpkkrkmden vcvsqlkqet ctavkkpkrd gdskdlaics milselethe
     2041 dawpfllpvn lklvpgykkv ikkpmdfsti rdklssgqyp nleafsldvr lvfdncetfn
     2101 eddsdigrag hnmrkyfekk wteifkvs
//
LOCUS       XP_041322000            1855 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TANC1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322000
VERSION     XP_041322000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1855
                     /product="protein TANC1 isoform X1"
                     /calculated_mol_wt=201943
     Region          <538..1202
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          956..982
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(957..958,961..963,965..966,970,973,982,984,986,
                     990..991,994..996,998..999,1003,1006,1015,1017,1019,
                     1023..1024,1027..1029,1031..1032,1036)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          963..1038
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          984..1015
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1075..1319
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1096..1126
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1132..1159
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1162..1192
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1163,1167..1168,1171..1173,1175..1176,1180,1183,
                     1192,1194,1196,1200..1201,1204..1206,1208..1209,1213,1216,
                     1225,1227,1229,1233..1234,1237..1239,1241..1242,1246,1249,
                     1258)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1194..1225
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1227..1258
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1260..1285
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1309..1334
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1310..1311,1314..1315,1317,1354,1357..1358,
                     1361..1362,1364..1365,1388,1391..1392,1395..1396,1399)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1313..>1439
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1352..1382
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1387..1415
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1855
                     /gene="TANC1"
                     /coded_by="XM_041466066.1:1..5568"
                     /db_xref="GeneID:121352806"
ORIGIN      
        1 mdvafifvsl cyslgatfkm lkavlkksre ggkgtkkdpa gdccpenasq vtatsghnad
       61 fpsgeqpgsq dtyraslakg vsmslpsspl lprqsylmqa raskkspgpv rkpkyvespr
      121 vpgeaalalq rrpepgepsa sakpdkdssc spaaqelmtr lgfllgegip asahmeekse
      181 vmcavasqgv spcstltsst tspstdspcs tlnscagkaa askgspcgti stpsstlesk
      241 dsgiiatits ssenddrsgs slewskdgsl ragkhqgisr drrtdncspv aeeeaigsse
      301 nlpkevstge gplpypqssa slimprpnsv aatsstkled lsyldgqrnt plrtsirlpw
      361 hntaggrvqq earfipykpq dillkpllfe vpsittdsvf vgrewlfhti eeklqnpepa
      421 enrgavitgn vgfgktavis rlvalschgs rmrqiasnsp ssspktggdc cqeiplsqlp
      481 pcppppsgdt ntmkaltcsg apeyktqtgd svrrlaskvv ayhycqadnt ytclvpefvh
      541 svaallcrsh qltayrdlli rdphlqsmls lrscvqdpaa afkrgvlepl snlrreqkip
      601 eedyiilvdg lndaefhkpd ygdtissfit siiykfppwl klivtvrtnf qevvsslpft
      661 aisldnfpdn kgihddlnay iqyrinnsqe iinnmslngk adaatigkvs nhlimrslgs
      721 ylylkltldl fqrghlviks asykvvpvsl selyllqcnm kfmtnsafer aqpilnvala
      781 slhpmtddqi fqainagqin seqqwedfsq rmealscfli krrdktrmfc hpsfrewlvw
      841 raegentdfl ceprsghall afmfsrqegk lnrqqtmelg hhilkahifk glskrtgiss
      901 shlqalwigy stdglstala slrniytpnv kvsrllilag anvnyrtevl nnapvlcvqs
      961 hlgheevvtl llefgaaidg tsengmtals yaaaaghmni vsllcrkgak adladkkgqc
     1021 alvhsalrgh cgilefllgl vwvapsqeqd slrkrqalqq altaaasmgh cqvvryiltv
     1081 ekdhdmdind tdalwgetal taaagrgkle vcrlllghga avsrasrrgv ppllcavrqg
     1141 hwqiakllve hgadvnlsdk qgrtplmvas ceghlstvef llsegaivss ldkegltals
     1201 waclkghkev vqylvekgaa tdqtdkngrt pldlaafygd adivqylvek gamiehvdhs
     1261 gmrpldraig crntsvvvml lrkgaklgna awamatskpd illillqklm eegntlykkg
     1321 kmreaaqryq yalrkfpreg fgeemkafte lrvslylnls rcrrktndfg maeefatkal
     1381 dlkpkcyeay yararakrns rkllaalsdl reaaqicpsn qeikrllarv eeeckqfqrt
     1441 qqqkhqspql leqtnnsdne eegivpgvnd nfnlqdrede lphpnesvsp sqrlqcssaa
     1501 slfsrtlqeg vqkaqcvspq srannkylre pglvmqptkq aqivktnqhl ssiqpgskpg
     1561 ssqcstkpqs slqhlphspl pirhcrsqqv dgtstlssgs istdltaell hneklvssqr
     1621 shpqhhetls srsfpskskp gdtstasvpm nfsdsrqqsp vpsggscgsp sssvilasss
     1681 gsftsassls gsvkglgpdv rlkdtnisqa qgtehrprnt pfmgimdkta rfqqqntqss
     1741 rtwhsqaadg lstnivsagi qpsnleqfsv khystkgsst gaalgdgsqs smqakeqeel
     1801 tchipahctd srspnqgshs ypdavarlps hstqdghlsh vttakpkrsf iesnv
//
LOCUS       XP_041322001            1836 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TANC1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322001
VERSION     XP_041322001.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466067.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1836
                     /product="protein TANC1 isoform X2"
                     /calculated_mol_wt=199848
     Region          <519..1183
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          937..963
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(938..939,942..944,946..947,951,954,963,965,967,
                     971..972,975..977,979..980,984,987,996,998,1000,
                     1004..1005,1008..1010,1012..1013,1017)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          944..1019
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          965..996
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1056..1300
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1077..1107
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1113..1140
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1143..1173
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1144,1148..1149,1152..1154,1156..1157,1161,1164,
                     1173,1175,1177,1181..1182,1185..1187,1189..1190,1194,1197,
                     1206,1208,1210,1214..1215,1218..1220,1222..1223,1227,1230,
                     1239)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1175..1206
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1208..1239
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1241..1266
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1290..1315
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1291..1292,1295..1296,1298,1335,1338..1339,
                     1342..1343,1345..1346,1369,1372..1373,1376..1377,1380)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1294..>1420
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1333..1363
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1368..1396
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1836
                     /gene="TANC1"
                     /coded_by="XM_041466067.1:145..5655"
                     /db_xref="GeneID:121352806"
ORIGIN      
        1 mlkavlkksr eggkgtkkdp agdccpenas qvtatsghna dfpsgeqpgs qdtyraslak
       61 gvsmslpssp llprqsylmq araskkspgp vrkpkyvesp rvpgeaalal qrrpepgeps
      121 asakpdkdss cspaaqelmt rlgfllgegi pasahmeeks evmcavasqg vspcstltss
      181 ttspstdspc stlnscagka aaskgspcgt istpsstles kdsgiiatit sssenddrsg
      241 sslewskdgs lragkhqgis rdrrtdncsp vaeeeaigss enlpkevstg egplpypqss
      301 aslimprpns vaatsstkle dlsyldgqrn tplrtsirlp whntaggrvq qearfipykp
      361 qdillkpllf evpsittdsv fvgrewlfht ieeklqnpep aenrgavitg nvgfgktavi
      421 srlvalschg srmrqiasns pssspktggd ccqeiplsql ppcppppsgd tntmkaltcs
      481 gapeyktqtg dsvrrlaskv vayhycqadn tytclvpefv hsvaallcrs hqltayrdll
      541 irdphlqsml slrscvqdpa aafkrgvlep lsnlrreqki peedyiilvd glndaefhkp
      601 dygdtissfi tsiiykfppw lklivtvrtn fqevvsslpf taisldnfpd nkgihddlna
      661 yiqyrinnsq eiinnmslng kadaatigkv snhlimrslg sylylkltld lfqrghlvik
      721 sasykvvpvs lselyllqcn mkfmtnsafe raqpilnval aslhpmtddq ifqainagqi
      781 nseqqwedfs qrmealscfl ikrrdktrmf chpsfrewlv wraegentdf lceprsghal
      841 lafmfsrqeg klnrqqtmel ghhilkahif kglskrtgis sshlqalwig ystdglstal
      901 aslrniytpn vkvsrllila ganvnyrtev lnnapvlcvq shlgheevvt lllefgaaid
      961 gtsengmtal syaaaaghmn ivsllcrkga kadladkkgq calvhsalrg hcgilefllg
     1021 lvwvapsqeq dslrkrqalq qaltaaasmg hcqvvryilt vekdhdmdin dtdalwgeta
     1081 ltaaagrgkl evcrlllghg aavsrasrrg vppllcavrq ghwqiakllv ehgadvnlsd
     1141 kqgrtplmva sceghlstve fllsegaivs sldkegltal swaclkghke vvqylvekga
     1201 atdqtdkngr tpldlaafyg dadivqylve kgamiehvdh sgmrpldrai gcrntsvvvm
     1261 llrkgaklgn aawamatskp dillillqkl meegntlykk gkmreaaqry qyalrkfpre
     1321 gfgeemkaft elrvslylnl srcrrktndf gmaeefatka ldlkpkcyea yyararakrn
     1381 srkllaalsd lreaaqicps nqeikrllar veeeckqfqr tqqqkhqspq lleqtnnsdn
     1441 eeegivpgvn dnfnlqdred elphpnesvs psqrlqcssa aslfsrtlqe gvqkaqcvsp
     1501 qsrannkylr epglvmqptk qaqivktnqh lssiqpgskp gssqcstkpq sslqhlphsp
     1561 lpirhcrsqq vdgtstlssg sistdltael lhneklvssq rshpqhhetl ssrsfpsksk
     1621 pgdtstasvp mnfsdsrqqs pvpsggscgs psssvilass sgsftsassl sgsvkglgpd
     1681 vrlkdtnisq aqgtehrprn tpfmgimdkt arfqqqntqs srtwhsqaad glstnivsag
     1741 iqpsnleqfs vkhystkgss tgaalgdgsq ssmqakeqee ltchipahct dsrspnqgsh
     1801 sypdavarlp shstqdghls hvttakpkrs fiesnv
//
LOCUS       XP_041322002            1836 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TANC1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322002
VERSION     XP_041322002.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466068.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1836
                     /product="protein TANC1 isoform X2"
                     /calculated_mol_wt=199848
     Region          <519..1183
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          937..963
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(938..939,942..944,946..947,951,954,963,965,967,
                     971..972,975..977,979..980,984,987,996,998,1000,
                     1004..1005,1008..1010,1012..1013,1017)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          944..1019
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          965..996
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1056..1300
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1077..1107
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1113..1140
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1143..1173
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1144,1148..1149,1152..1154,1156..1157,1161,1164,
                     1173,1175,1177,1181..1182,1185..1187,1189..1190,1194,1197,
                     1206,1208,1210,1214..1215,1218..1220,1222..1223,1227,1230,
                     1239)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1175..1206
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1208..1239
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1241..1266
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1290..1315
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1291..1292,1295..1296,1298,1335,1338..1339,
                     1342..1343,1345..1346,1369,1372..1373,1376..1377,1380)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1294..>1420
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1333..1363
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1368..1396
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1836
                     /gene="TANC1"
                     /coded_by="XM_041466068.1:79..5589"
                     /db_xref="GeneID:121352806"
ORIGIN      
        1 mlkavlkksr eggkgtkkdp agdccpenas qvtatsghna dfpsgeqpgs qdtyraslak
       61 gvsmslpssp llprqsylmq araskkspgp vrkpkyvesp rvpgeaalal qrrpepgeps
      121 asakpdkdss cspaaqelmt rlgfllgegi pasahmeeks evmcavasqg vspcstltss
      181 ttspstdspc stlnscagka aaskgspcgt istpsstles kdsgiiatit sssenddrsg
      241 sslewskdgs lragkhqgis rdrrtdncsp vaeeeaigss enlpkevstg egplpypqss
      301 aslimprpns vaatsstkle dlsyldgqrn tplrtsirlp whntaggrvq qearfipykp
      361 qdillkpllf evpsittdsv fvgrewlfht ieeklqnpep aenrgavitg nvgfgktavi
      421 srlvalschg srmrqiasns pssspktggd ccqeiplsql ppcppppsgd tntmkaltcs
      481 gapeyktqtg dsvrrlaskv vayhycqadn tytclvpefv hsvaallcrs hqltayrdll
      541 irdphlqsml slrscvqdpa aafkrgvlep lsnlrreqki peedyiilvd glndaefhkp
      601 dygdtissfi tsiiykfppw lklivtvrtn fqevvsslpf taisldnfpd nkgihddlna
      661 yiqyrinnsq eiinnmslng kadaatigkv snhlimrslg sylylkltld lfqrghlvik
      721 sasykvvpvs lselyllqcn mkfmtnsafe raqpilnval aslhpmtddq ifqainagqi
      781 nseqqwedfs qrmealscfl ikrrdktrmf chpsfrewlv wraegentdf lceprsghal
      841 lafmfsrqeg klnrqqtmel ghhilkahif kglskrtgis sshlqalwig ystdglstal
      901 aslrniytpn vkvsrllila ganvnyrtev lnnapvlcvq shlgheevvt lllefgaaid
      961 gtsengmtal syaaaaghmn ivsllcrkga kadladkkgq calvhsalrg hcgilefllg
     1021 lvwvapsqeq dslrkrqalq qaltaaasmg hcqvvryilt vekdhdmdin dtdalwgeta
     1081 ltaaagrgkl evcrlllghg aavsrasrrg vppllcavrq ghwqiakllv ehgadvnlsd
     1141 kqgrtplmva sceghlstve fllsegaivs sldkegltal swaclkghke vvqylvekga
     1201 atdqtdkngr tpldlaafyg dadivqylve kgamiehvdh sgmrpldrai gcrntsvvvm
     1261 llrkgaklgn aawamatskp dillillqkl meegntlykk gkmreaaqry qyalrkfpre
     1321 gfgeemkaft elrvslylnl srcrrktndf gmaeefatka ldlkpkcyea yyararakrn
     1381 srkllaalsd lreaaqicps nqeikrllar veeeckqfqr tqqqkhqspq lleqtnnsdn
     1441 eeegivpgvn dnfnlqdred elphpnesvs psqrlqcssa aslfsrtlqe gvqkaqcvsp
     1501 qsrannkylr epglvmqptk qaqivktnqh lssiqpgskp gssqcstkpq sslqhlphsp
     1561 lpirhcrsqq vdgtstlssg sistdltael lhneklvssq rshpqhhetl ssrsfpsksk
     1621 pgdtstasvp mnfsdsrqqs pvpsggscgs psssvilass sgsftsassl sgsvkglgpd
     1681 vrlkdtnisq aqgtehrprn tpfmgimdkt arfqqqntqs srtwhsqaad glstnivsag
     1741 iqpsnleqfs vkhystkgss tgaalgdgsq ssmqakeqee ltchipahct dsrspnqgsh
     1801 sypdavarlp shstqdghls hvttakpkrs fiesnv
//
LOCUS       XP_041322003            1835 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TANC1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322003
VERSION     XP_041322003.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466069.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1835
                     /product="protein TANC1 isoform X3"
                     /calculated_mol_wt=199777
     Region          <518..1182
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          936..962
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(937..938,941..943,945..946,950,953,962,964,966,
                     970..971,974..976,978..979,983,986,995,997,999,1003..1004,
                     1007..1009,1011..1012,1016)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          943..1018
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          964..995
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1055..1299
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1076..1106
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1112..1139
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1142..1172
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1143,1147..1148,1151..1153,1155..1156,1160,1163,
                     1172,1174,1176,1180..1181,1184..1186,1188..1189,1193,1196,
                     1205,1207,1209,1213..1214,1217..1219,1221..1222,1226,1229,
                     1238)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1174..1205
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1207..1238
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1240..1265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1289..1314
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1290..1291,1294..1295,1297,1334,1337..1338,
                     1341..1342,1344..1345,1368,1371..1372,1375..1376,1379)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1293..>1419
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1332..1362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1367..1395
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1835
                     /gene="TANC1"
                     /coded_by="XM_041466069.1:145..5652"
                     /db_xref="GeneID:121352806"
ORIGIN      
        1 mlkavlkksr eggkgtkkdp agdccpenas qvtatsghna dfpsgeqpgs qdtyraslak
       61 gvsmslpssp llprqsylmq araskkspgp vrkpkyvesp rvpgeaalal qrrpepgeps
      121 asakpdkdss cspaaqelmt rlgfllgegi pasahmeeks evmcavasqg vspcstltss
      181 ttspstdspc stlnscagka aaskgspcgt istpsstles kdsgiiatit sssenddrsg
      241 sslewskdgs lragkhqgis rdrrtdncsp vaeeeaigss enlpkevstg egplpypqss
      301 aslimprpns vaatsstkle dlsyldgqrn tplrtsirlp whntaggrvq qearfipykp
      361 qdillkpllf evpsittdsv fvgrewlfht ieeklqnpep aenrgavitg nvgfgktavi
      421 srlvalschg srmrqiasns pssspksgdc cqeiplsqlp pcppppsgdt ntmkaltcsg
      481 apeyktqtgd svrrlaskvv ayhycqadnt ytclvpefvh svaallcrsh qltayrdlli
      541 rdphlqsmls lrscvqdpaa afkrgvlepl snlrreqkip eedyiilvdg lndaefhkpd
      601 ygdtissfit siiykfppwl klivtvrtnf qevvsslpft aisldnfpdn kgihddlnay
      661 iqyrinnsqe iinnmslngk adaatigkvs nhlimrslgs ylylkltldl fqrghlviks
      721 asykvvpvsl selyllqcnm kfmtnsafer aqpilnvala slhpmtddqi fqainagqin
      781 seqqwedfsq rmealscfli krrdktrmfc hpsfrewlvw raegentdfl ceprsghall
      841 afmfsrqegk lnrqqtmelg hhilkahifk glskrtgiss shlqalwigy stdglstala
      901 slrniytpnv kvsrllilag anvnyrtevl nnapvlcvqs hlgheevvtl llefgaaidg
      961 tsengmtals yaaaaghmni vsllcrkgak adladkkgqc alvhsalrgh cgilefllgl
     1021 vwvapsqeqd slrkrqalqq altaaasmgh cqvvryiltv ekdhdmdind tdalwgetal
     1081 taaagrgkle vcrlllghga avsrasrrgv ppllcavrqg hwqiakllve hgadvnlsdk
     1141 qgrtplmvas ceghlstvef llsegaivss ldkegltals waclkghkev vqylvekgaa
     1201 tdqtdkngrt pldlaafygd adivqylvek gamiehvdhs gmrpldraig crntsvvvml
     1261 lrkgaklgna awamatskpd illillqklm eegntlykkg kmreaaqryq yalrkfpreg
     1321 fgeemkafte lrvslylnls rcrrktndfg maeefatkal dlkpkcyeay yararakrns
     1381 rkllaalsdl reaaqicpsn qeikrllarv eeeckqfqrt qqqkhqspql leqtnnsdne
     1441 eegivpgvnd nfnlqdrede lphpnesvsp sqrlqcssaa slfsrtlqeg vqkaqcvspq
     1501 srannkylre pglvmqptkq aqivktnqhl ssiqpgskpg ssqcstkpqs slqhlphspl
     1561 pirhcrsqqv dgtstlssgs istdltaell hneklvssqr shpqhhetls srsfpskskp
     1621 gdtstasvpm nfsdsrqqsp vpsggscgsp sssvilasss gsftsassls gsvkglgpdv
     1681 rlkdtnisqa qgtehrprnt pfmgimdkta rfqqqntqss rtwhsqaadg lstnivsagi
     1741 qpsnleqfsv khystkgsst gaalgdgsqs smqakeqeel tchipahctd srspnqgshs
     1801 ypdavarlps hstqdghlsh vttakpkrsf iesnv
//
LOCUS       XP_041322004            1835 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TANC1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322004
VERSION     XP_041322004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466070.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1835
                     /product="protein TANC1 isoform X4"
                     /calculated_mol_wt=199777
     Region          <518..1182
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          936..962
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(937..938,941..943,945..946,950,953,962,964,966,
                     970..971,974..976,978..979,983,986,995,997,999,1003..1004,
                     1007..1009,1011..1012,1016)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          943..1018
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          964..995
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1055..1299
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1076..1106
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1112..1139
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1142..1172
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1143,1147..1148,1151..1153,1155..1156,1160,1163,
                     1172,1174,1176,1180..1181,1184..1186,1188..1189,1193,1196,
                     1205,1207,1209,1213..1214,1217..1219,1221..1222,1226,1229,
                     1238)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1174..1205
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1207..1238
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1240..1265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1289..1314
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1290..1291,1294..1295,1297,1334,1337..1338,
                     1341..1342,1344..1345,1368,1371..1372,1375..1376,1379)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1293..>1419
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1332..1362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1367..1395
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1835
                     /gene="TANC1"
                     /coded_by="XM_041466070.1:145..5652"
                     /db_xref="GeneID:121352806"
ORIGIN      
        1 mlkavlkksr eggkgtkkdp gdccpenasq vtatsghnad fpsgeqpgsq dtyraslakg
       61 vsmslpsspl lprqsylmqa raskkspgpv rkpkyvespr vpgeaalalq rrpepgepsa
      121 sakpdkdssc spaaqelmtr lgfllgegip asahmeekse vmcavasqgv spcstltsst
      181 tspstdspcs tlnscagkaa askgspcgti stpsstlesk dsgiiatits ssenddrsgs
      241 slewskdgsl ragkhqgisr drrtdncspv aeeeaigsse nlpkevstge gplpypqssa
      301 slimprpnsv aatsstkled lsyldgqrnt plrtsirlpw hntaggrvqq earfipykpq
      361 dillkpllfe vpsittdsvf vgrewlfhti eeklqnpepa enrgavitgn vgfgktavis
      421 rlvalschgs rmrqiasnsp ssspktggdc cqeiplsqlp pcppppsgdt ntmkaltcsg
      481 apeyktqtgd svrrlaskvv ayhycqadnt ytclvpefvh svaallcrsh qltayrdlli
      541 rdphlqsmls lrscvqdpaa afkrgvlepl snlrreqkip eedyiilvdg lndaefhkpd
      601 ygdtissfit siiykfppwl klivtvrtnf qevvsslpft aisldnfpdn kgihddlnay
      661 iqyrinnsqe iinnmslngk adaatigkvs nhlimrslgs ylylkltldl fqrghlviks
      721 asykvvpvsl selyllqcnm kfmtnsafer aqpilnvala slhpmtddqi fqainagqin
      781 seqqwedfsq rmealscfli krrdktrmfc hpsfrewlvw raegentdfl ceprsghall
      841 afmfsrqegk lnrqqtmelg hhilkahifk glskrtgiss shlqalwigy stdglstala
      901 slrniytpnv kvsrllilag anvnyrtevl nnapvlcvqs hlgheevvtl llefgaaidg
      961 tsengmtals yaaaaghmni vsllcrkgak adladkkgqc alvhsalrgh cgilefllgl
     1021 vwvapsqeqd slrkrqalqq altaaasmgh cqvvryiltv ekdhdmdind tdalwgetal
     1081 taaagrgkle vcrlllghga avsrasrrgv ppllcavrqg hwqiakllve hgadvnlsdk
     1141 qgrtplmvas ceghlstvef llsegaivss ldkegltals waclkghkev vqylvekgaa
     1201 tdqtdkngrt pldlaafygd adivqylvek gamiehvdhs gmrpldraig crntsvvvml
     1261 lrkgaklgna awamatskpd illillqklm eegntlykkg kmreaaqryq yalrkfpreg
     1321 fgeemkafte lrvslylnls rcrrktndfg maeefatkal dlkpkcyeay yararakrns
     1381 rkllaalsdl reaaqicpsn qeikrllarv eeeckqfqrt qqqkhqspql leqtnnsdne
     1441 eegivpgvnd nfnlqdrede lphpnesvsp sqrlqcssaa slfsrtlqeg vqkaqcvspq
     1501 srannkylre pglvmqptkq aqivktnqhl ssiqpgskpg ssqcstkpqs slqhlphspl
     1561 pirhcrsqqv dgtstlssgs istdltaell hneklvssqr shpqhhetls srsfpskskp
     1621 gdtstasvpm nfsdsrqqsp vpsggscgsp sssvilasss gsftsassls gsvkglgpdv
     1681 rlkdtnisqa qgtehrprnt pfmgimdkta rfqqqntqss rtwhsqaadg lstnivsagi
     1741 qpsnleqfsv khystkgsst gaalgdgsqs smqakeqeel tchipahctd srspnqgshs
     1801 ypdavarlps hstqdghlsh vttakpkrsf iesnv
//
LOCUS       XP_041322006            1835 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TANC1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322006
VERSION     XP_041322006.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466072.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1835
                     /product="protein TANC1 isoform X4"
                     /calculated_mol_wt=199777
     Region          <518..1182
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          936..962
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(937..938,941..943,945..946,950,953,962,964,966,
                     970..971,974..976,978..979,983,986,995,997,999,1003..1004,
                     1007..1009,1011..1012,1016)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          943..1018
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          964..995
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1055..1299
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          1076..1106
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1112..1139
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1142..1172
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(1143,1147..1148,1151..1153,1155..1156,1160,1163,
                     1172,1174,1176,1180..1181,1184..1186,1188..1189,1193,1196,
                     1205,1207,1209,1213..1214,1217..1219,1221..1222,1226,1229,
                     1238)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          1174..1205
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1207..1238
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1240..1265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          1289..1314
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1290..1291,1294..1295,1297,1334,1337..1338,
                     1341..1342,1344..1345,1368,1371..1372,1375..1376,1379)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1293..>1419
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          1332..1362
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1367..1395
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1835
                     /gene="TANC1"
                     /coded_by="XM_041466072.1:103..5610"
                     /db_xref="GeneID:121352806"
ORIGIN      
        1 mlkavlkksr eggkgtkkdp gdccpenasq vtatsghnad fpsgeqpgsq dtyraslakg
       61 vsmslpsspl lprqsylmqa raskkspgpv rkpkyvespr vpgeaalalq rrpepgepsa
      121 sakpdkdssc spaaqelmtr lgfllgegip asahmeekse vmcavasqgv spcstltsst
      181 tspstdspcs tlnscagkaa askgspcgti stpsstlesk dsgiiatits ssenddrsgs
      241 slewskdgsl ragkhqgisr drrtdncspv aeeeaigsse nlpkevstge gplpypqssa
      301 slimprpnsv aatsstkled lsyldgqrnt plrtsirlpw hntaggrvqq earfipykpq
      361 dillkpllfe vpsittdsvf vgrewlfhti eeklqnpepa enrgavitgn vgfgktavis
      421 rlvalschgs rmrqiasnsp ssspktggdc cqeiplsqlp pcppppsgdt ntmkaltcsg
      481 apeyktqtgd svrrlaskvv ayhycqadnt ytclvpefvh svaallcrsh qltayrdlli
      541 rdphlqsmls lrscvqdpaa afkrgvlepl snlrreqkip eedyiilvdg lndaefhkpd
      601 ygdtissfit siiykfppwl klivtvrtnf qevvsslpft aisldnfpdn kgihddlnay
      661 iqyrinnsqe iinnmslngk adaatigkvs nhlimrslgs ylylkltldl fqrghlviks
      721 asykvvpvsl selyllqcnm kfmtnsafer aqpilnvala slhpmtddqi fqainagqin
      781 seqqwedfsq rmealscfli krrdktrmfc hpsfrewlvw raegentdfl ceprsghall
      841 afmfsrqegk lnrqqtmelg hhilkahifk glskrtgiss shlqalwigy stdglstala
      901 slrniytpnv kvsrllilag anvnyrtevl nnapvlcvqs hlgheevvtl llefgaaidg
      961 tsengmtals yaaaaghmni vsllcrkgak adladkkgqc alvhsalrgh cgilefllgl
     1021 vwvapsqeqd slrkrqalqq altaaasmgh cqvvryiltv ekdhdmdind tdalwgetal
     1081 taaagrgkle vcrlllghga avsrasrrgv ppllcavrqg hwqiakllve hgadvnlsdk
     1141 qgrtplmvas ceghlstvef llsegaivss ldkegltals waclkghkev vqylvekgaa
     1201 tdqtdkngrt pldlaafygd adivqylvek gamiehvdhs gmrpldraig crntsvvvml
     1261 lrkgaklgna awamatskpd illillqklm eegntlykkg kmreaaqryq yalrkfpreg
     1321 fgeemkafte lrvslylnls rcrrktndfg maeefatkal dlkpkcyeay yararakrns
     1381 rkllaalsdl reaaqicpsn qeikrllarv eeeckqfqrt qqqkhqspql leqtnnsdne
     1441 eegivpgvnd nfnlqdrede lphpnesvsp sqrlqcssaa slfsrtlqeg vqkaqcvspq
     1501 srannkylre pglvmqptkq aqivktnqhl ssiqpgskpg ssqcstkpqs slqhlphspl
     1561 pirhcrsqqv dgtstlssgs istdltaell hneklvssqr shpqhhetls srsfpskskp
     1621 gdtstasvpm nfsdsrqqsp vpsggscgsp sssvilasss gsftsassls gsvkglgpdv
     1681 rlkdtnisqa qgtehrprnt pfmgimdkta rfqqqntqss rtwhsqaadg lstnivsagi
     1741 qpsnleqfsv khystkgsst gaalgdgsqs smqakeqeel tchipahctd srspnqgshs
     1801 ypdavarlps hstqdghlsh vttakpkrsf iesnv
//
LOCUS       XP_041322007             473 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat, SAM and U-box domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322007
VERSION     XP_041322007.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466073.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="WD repeat, SAM and U-box domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=51911
     Region          <3..311
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          18..52
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          58..96
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          100..135
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          143..177
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          185..236
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          284..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..395
                     /region_name="SAM_WDSUB1"
                     /note="SAM domain of WDSUB1 proteins; cd09505"
                     /db_xref="CDD:188904"
     Region          403..457
                     /region_name="RING-Ubox_WDSUB1-like"
                     /note="U-box domain, a modified RING finger, found in WD
                     repeat, SAM and U-box domain-containing protein 1 (WDSUB1)
                     and similar proteins; cd16655"
                     /db_xref="CDD:438317"
     CDS             1..473
                     /gene="WDSUB1"
                     /coded_by="XM_041466073.1:159..1580"
                     /db_xref="GeneID:121352807"
ORIGIN      
        1 matlihtlad hsddvnycaf sssclatcsl dktirvysls dfaelpyspl eghtyavhcc
       61 cfspsglvla scstdgtsal wdardgrrla vleqpgaspv rvcrfspgaa hllagaadgs
      121 vvlwnvqsmk lyrsgkvkgg slmacafspn gnffvtgsss gdltiwddkm rclynekahd
      181 lgvtccdiss hpvsdsengf kyfqmascgq dnhiklwlil fadflgvqlk ykctlnghsa
      241 pvlacafscd gqmivsgsvd kcviiyetst gttlhtlsrh tryvttcafa phspllatgs
      301 mdktvhiwql dlkqpcagrt veneskvave dwseddvsaw lcaqdlanfv elfkinnidg
      361 kellnltkes lakelkiesl glrskvlqki eelkmttisv svpdeflcpi trelmndpvi
      421 atdgysyere amenwissrr sspmtnlplh slmltpnrtl kmainrwlet qqk
//
LOCUS       XP_041322008             458 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat, SAM and U-box domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322008
VERSION     XP_041322008.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466074.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..458
                     /product="WD repeat, SAM and U-box domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=49522
     Region          <3..311
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          18..52
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          58..96
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          100..135
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          143..177
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          185..236
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          284..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          329..395
                     /region_name="SAM_WDSUB1"
                     /note="SAM domain of WDSUB1 proteins; cd09505"
                     /db_xref="CDD:188904"
     Region          403..>421
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..458
                     /gene="WDSUB1"
                     /coded_by="XM_041466074.1:159..1535"
                     /db_xref="GeneID:121352807"
ORIGIN      
        1 matlihtlad hsddvnycaf sssclatcsl dktirvysls dfaelpyspl eghtyavhcc
       61 cfspsglvla scstdgtsal wdardgrrla vleqpgaspv rvcrfspgaa hllagaadgs
      121 vvlwnvqsmk lyrsgkvkgg slmacafspn gnffvtgsss gdltiwddkm rclynekahd
      181 lgvtccdiss hpvsdsengf kyfqmascgq dnhiklwlil fadflgvqlk ykctlnghsa
      241 pvlacafscd gqmivsgsvd kcviiyetst gttlhtlsrh tryvttcafa phspllatgs
      301 mdktvhiwql dlkqpcagrt veneskvave dwseddvsaw lcaqdlanfv elfkinnidg
      361 kellnltkes lakelkiesl glrskvlqki eelkmttisv svpdeflcpi trelmndpvi
      421 atgsagsatn sksrspepgq vvktvqgwvs qvdkppvq
//
LOCUS       XP_041322009             465 aa            linear   VRT 06-MAY-2021
DEFINITION  activin receptor type-1C [Pyrgilauda ruficollis].
ACCESSION   XP_041322009
VERSION     XP_041322009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466075.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="activin receptor type-1C"
                     /calculated_mol_wt=51435
     Region          25..99
                     /region_name="TFP_LU_ECD_ALK7"
                     /note="extracellular domain (ECD) found in activin
                     receptor-like kinase 7 (ALK-7) and similar proteins;
                     cd23540"
                     /db_xref="CDD:467070"
     Region          138..165
                     /region_name="TGF_beta_GS"
                     /note="Transforming growth factor beta type I GS-motif;
                     pfam08515"
                     /db_xref="CDD:462503"
     Region          171..458
                     /region_name="STKc_TGFbR1_ACVR1b_ACVR1c"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Transforming Growth Factor beta Type I Receptor and
                     Activin Type IB/IC Receptors; cd14143"
                     /db_xref="CDD:271045"
     Site            order(173..177,181,192,194,222,242..245,249,251,295,297,
                     299..300,302,313,316,336..339)
                     /site_type="active"
                     /db_xref="CDD:271045"
     Site            order(173..179,181,192,194,242..243,245,249,299..300,302,
                     313)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271045"
     Site            order(177,249,251,295,297,299,316,336..339)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271045"
     Site            order(204..205,208..209,212..213,227,229)
                     /site_type="other"
                     /note="FKBP12 binding site [polypeptide binding]"
                     /db_xref="CDD:271045"
     Site            312..339
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271045"
     CDS             1..465
                     /gene="ACVR1C"
                     /coded_by="XM_041466075.1:49..1446"
                     /db_xref="GeneID:121352808"
ORIGIN      
        1 mrgapgsalr aalpllgaav slcaglqcvc qlcehtnftc htegacwasv mltngreevv
       61 kscvslpeln aqvfchsskn itkteccytd fcnnitlrlp lgecrsagsa cpargrrrrp
      121 psveeppceg slvgsgktlk dliydmttsg sgsglpllvq rtiartivlq eivgkgrfge
      181 vwhgkwcged vavkifssrd erswfreaei yqtvmlrhen ilgfiaadnk dngtwtqlwl
      241 vseyheqgsl fdylnrgtvt vegmvrlals vasglahlhm eivgtqgkpa iahrdlkskn
      301 ilvkrnetca iadlglavkh dsvlntidip qnprvgtrry mapeilddam ntnifesfkr
      361 adiyslglvy weiarrcpvg giteeyqlpy ydlvpsdpsi edmrrvvceq klrpsipnqw
      421 qscealrvlg rlmrecwras gaarltalrv kktisqlcvp edcka
//
LOCUS       XP_041322010             178 aa            linear   VRT 06-MAY-2021
DEFINITION  ermin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322010
VERSION     XP_041322010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466076.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="ermin-like"
                     /calculated_mol_wt=18354
     CDS             1..178
                     /gene="LOC121352809"
                     /coded_by="XM_041466076.1:1..537"
                     /db_xref="GeneID:121352809"
ORIGIN      
        1 mteevpaaat mpacngslpp edgplqvigg leeiakslgt vpyanaemsp dtlpakenle
       61 enrnslpedi apenfagekr cqekreenag tpqqgpadiq dagtngqgse agpggtagtg
      121 tevaetppgs aeprpnaaee aeaeeeeeee eqfcivpadi alivpftlvc lllglgkf
//
LOCUS       XP_041322011             288 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322011
VERSION     XP_041322011.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466077.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=31383
     CDS             1..288
                     /gene="LOC121352810"
                     /coded_by="XM_041466077.1:271..1137"
                     /db_xref="GeneID:121352810"
ORIGIN      
        1 mtvpsasckl tsrtwagigk mklkrerrkv patnpheltc saaasrheal slgisfeqcs
       61 pypsaypgvp adplrsshrp stveapraph kplysatpck teqrrparpp sfpthlllhr
      121 rvapsprdlg vpqmtseprv ftpfssppkk aqnesncpgq qrsasfkpfp rvhpprkglr
      181 rnkkgeaapr raqappqprc hrererqgrq arsggrsqrd vgkaagpavp ggvsdrhggs
      241 aetprpraga egrrapalwa lfsgaprlra kkeredgnre gkagdekr
//
LOCUS       XP_041322013             367 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 2-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322013
VERSION     XP_041322013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466079.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>367
                     /product="rho guanine nucleotide exchange factor 2-like"
     Region          <35..131
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cl02571"
                     /db_xref="CDD:470622"
     Site            order(54,82..83,86..87,89..90,93..94,97..98,101,127,131)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          174..289
                     /region_name="PH_ARHGEF2"
                     /note="Rho guanine nucleotide exchange factor 2 Pleckstrin
                     homology (PH) domain; cd13393"
                     /db_xref="CDD:275428"
     CDS             1..367
                     /gene="LOC121352814"
                     /coded_by="XM_041466079.1:<1..>1100"
                     /db_xref="GeneID:121352814"
ORIGIN      
        1 prcpccplpv pavpwlspls prccakfsgp saeqlrkaya efcskhtkal keykdllard
       61 krfqqfirrv trspllrrhg vpecillvtq ritkypvlie rilknskdne gdsadlsral
      121 rlvkellsav deevhawelr grlwdvfrrv dprakvpllw dsrpgafgrd ellrrklvhs
      181 ggmlwktaag rfkdvlvllm tdvlvflqek dqkytfpmld kpavislqnl ivrdianqek
      241 gmflisaapp emyevhaasr ddrnhwmkvi qqavslcpsr qdfplietet easlrklker
      301 meqhdrqiaa lledkvgifa dmlalgsgcs etppaprgtp fpgdpargpr gdvllhdair
      361 egtgaag
//
LOCUS       XP_041322014             203 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamate-rich WD repeat-containing protein 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322014
VERSION     XP_041322014.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466080.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518796.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..203
                     /product="glutamate-rich WD repeat-containing protein
                     1-like"
     Region          <126..>189
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          136..176
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..203
                     /gene="LOC121352815"
                     /coded_by="XM_041466080.1:<1..612"
                     /db_xref="GeneID:121352815"
ORIGIN      
        1 vspaliggvp npsrvlllqm qnlhglrrgk ggdssdsdsd sdsdseqege grepqlllim
       61 aphygginrl rvtslggspv aavwsergqv evlalrgalg algtefgegd lgrgpksvqq
      121 galpalatfs ghmdegfgld wsplspgrll sgdvrgrihr wepreggwav dqrpllghgg
      181 svediqwsps easvrvakas fvf
//
LOCUS       XP_041322015             111 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent DNA helicase Q4-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322015
VERSION     XP_041322015.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466081.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518807.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>111
                     /product="ATP-dependent DNA helicase Q4-like"
     Region          84..>111
                     /region_name="RecQ"
                     /note="Superfamily II DNA helicase RecQ [Replication,
                     recombination and repair]; COG0514"
                     /db_xref="CDD:440280"
     CDS             1..111
                     /gene="LOC121352816"
                     /coded_by="XM_041466081.1:<1..>336"
                     /codon_start=3
                     /db_xref="GeneID:121352816"
ORIGIN      
        1 kkfgsfpeev peekelltle eaaqrsngdv ipeipdgsnt ensqlppdsl dfpqpefspp
       61 spppppmdpl yppnpdgtvp dppeevleal rtlgydsfrp gqaeaimrvl s
//
LOCUS       XP_041322016              85 aa            linear   VRT 06-MAY-2021
DEFINITION  neuroligin-2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322016
VERSION     XP_041322016.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466082.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518821.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>85
                     /product="neuroligin-2-like"
     Region          1..>72
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..85
                     /gene="LOC121352817"
                     /coded_by="XM_041466082.1:<1..>256"
                     /db_xref="GeneID:121352817"
ORIGIN      
        1 rdlsnellgp vqaflgvpya applgprrwa ppeapaawgg vrdatafapa cpqnlragpp
       61 plmlplwlsd nleaagayva aqsed
//
LOCUS       XP_041322017             230 aa            linear   VRT 06-MAY-2021
DEFINITION  metallo-beta-lactamase domain-containing protein 1, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322017
VERSION     XP_041322017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518829.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>230
                     /product="metallo-beta-lactamase domain-containing protein
                     1"
     Region          24..210
                     /region_name="MBLAC1-like_MBL-fold"
                     /note="uncharacterized human metallo-beta-lactamase
                     domain-containing protein 1 and related proteins; MBL-fold
                     metallo hydrolase domain; cd07711"
                     /db_xref="CDD:293797"
     Site            order(88,90,92..93,144..145,166,205)
                     /site_type="active"
                     /db_xref="CDD:293797"
     CDS             1..230
                     /gene="MBLAC1"
                     /coded_by="XM_041466083.1:51..>740"
                     /db_xref="GeneID:121352818"
ORIGIN      
        1 mprgyrtapl gslavagply slrvlragys rrhadgtcra dgsvtllwgg pltvlvdtgg
       61 pwlrprlpgl laargvaped vthvvvthgh sdhagnlnlf pratllvgfd lsrgeglylp
      121 hglaqgvple lhpghlrvvp tpghtrahvs llalgtalgt vavagdafer gedeeeweal
      181 seepaaqrrs reelaaaaev ivpghgepfr vvrewgtpee eeeegggsee
//
LOCUS       XP_041322019             131 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 22-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322019
VERSION     XP_041322019.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466085.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518840.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>131
                     /product="zinc finger protein 22-like"
     Region          3..19
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          27..47
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(32,34,36,38..39,42..43,46,60,62,66..67,70..71,74,
                     115,117,119,121..122,125..126,129)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          43..>64
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          55..102
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          83..>116
                     /region_name="Mcm2"
                     /note="DNA replicative helicase MCM subunit Mcm2,
                     Cdc46/Mcm family [Replication, recombination and repair];
                     COG1241"
                     /db_xref="CDD:440854"
     Region          108..130
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          110..130
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..131
                     /gene="LOC121352819"
                     /coded_by="XM_041466085.1:<1..>392"
                     /db_xref="GeneID:121352819"
ORIGIN      
        1 edgqsfsqsw elvvpehlqd gkrpykclec gkstnqsssl lihhwvhtrk rpykcgecgk
       61 rfqsssnlll hqqihteerp sccpdcgkgf kqnstlitqs shtgerpyec pkcgksftss
      121 shltqhqqsh r
//
LOCUS       XP_041322020              86 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 668-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322020
VERSION     XP_041322020.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466086.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518857.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>86
                     /product="zinc finger protein 668-like"
     Region          <1..80
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          4..24
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(9,11,13,15..16,19..20,23,37,39,43..44,47..48,51,65,
                     67,69,71..72,75..76,79)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          32..52
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          60..80
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..86
                     /gene="LOC121352820"
                     /coded_by="XM_041466086.1:<1..>259"
                     /db_xref="GeneID:121352820"
ORIGIN      
        1 pwrcgdcgka fvaswdlkrh rlthsgerpw rcgdcgkgfg eraalgkhrr thsgerpfac
       61 grcgkgfggv sglrkherth greegg
//
LOCUS       XP_041322021             792 aa            linear   VRT 06-MAY-2021
DEFINITION  cadherin-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041322021
VERSION     XP_041322021.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466087.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="cadherin-11"
                     /calculated_mol_wt=87350
     Site            order(65..66,117,119,151,153..154)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          79..157
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          164..264
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(170..171,225,227,260,262..263)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          272..379
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(279..280,336,338,376,378..379)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          387..484
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(394..395,447,449,480,482..483)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          492..589
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          724..783
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     CDS             1..792
                     /gene="CDH11"
                     /coded_by="XM_041466087.1:305..2683"
                     /db_xref="GeneID:121352821"
ORIGIN      
        1 mkedhclhaa llclgvlcys hgltterlsr arpslhahhe kgkegqvlhr skrgwvwnqf
       61 fvieeytgpd pvlvgrlhsd idsgdgniky ilsgegagii fviddksgni hatktldree
      121 raqytltaqa vdrntnrple ppsefivkvq dindnppefl henyhanvpe rsnvgtsviq
      181 vtasdaddpt ygnsaklvys ilegqpyfsv eaqtgiirta lpnmdreake eyhvviqakd
      241 mgghmgglsg ttkvtitltd vndnppkfpq svyqmsvsea avpgeevgrv kakdpdigen
      301 glvaysiidg dgmdmfeitt dyetqegvvk lkktldyetk ksyslkveaa nvhidpkfis
      361 ngpfkdtvtv kiavedadep pvflkpsyif evqenaasgt vvgkvhakdp daansairys
      421 idrhtdlery fvinaedgni ktikaldree mawhnisvfa vevhkqhqea kvpiaikvid
      481 vndnaprfaa ayeafvcena rsnqqfitis addkddsang prfifslppe iihnpnftlr
      541 dnrdntasvl vrregfsrqk qdlyllpivi sdggvpplss tntltirvcg cdgsgsllsc
      601 naeayvlnag lstgaliail acivillviv vlfvtlkrqk keplivfeee dvreniityd
      661 degggeedte afdiatlqnp dgingfmprk dikpeyqylp rpglrpapns vdvddfintr
      721 iqeadndpta ppydsiqiyg yegrgsvags lsslesattd sdldydylqn wgprfkklad
      781 lygskdtfdd ds
//
LOCUS       XP_041322022             294 aa            linear   VRT 06-MAY-2021
DEFINITION  soluble scavenger receptor cysteine-rich domain-containing protein
            SSC5D-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322022
VERSION     XP_041322022.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466088.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518885.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>294
                     /product="soluble scavenger receptor cysteine-rich
                     domain-containing protein SSC5D-like"
     Region          1..100
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          <94..138
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          194..293
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     CDS             1..294
                     /gene="LOC121352822"
                     /coded_by="XM_041466088.1:<1..>883"
                     /db_xref="GeneID:121352822"
ORIGIN      
        1 vrladgpgac agrvevlhlg rwgtvcddtw afpaaavvcr ylgcgqviaa pprarfgpgr
       61 gqvwldgltc tgeeaapsec rhkgwgvhtc ehsedasvvc agerrtggts lngadiysgc
      121 gtlkieyakv rpqrpqvrpc ltqvrprhpq vqpcrpqvrp rnpqvcpqvr prnpqvtpap
      181 hlcpesalpa lpqvrlsgap drcagrvevr hahlwgtvcd dtwglrearv lcahlrcgpa
      241 leapggaryg qgegpiwldd vtcsgeepdf frcahrtwge hnchhgedag vvca
//
LOCUS       XP_041322023              82 aa            linear   VRT 06-MAY-2021
DEFINITION  pyruvate carboxylase, mitochondrial-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322023
VERSION     XP_041322023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518886.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>82
                     /product="pyruvate carboxylase, mitochondrial-like"
     Region          <16..>82
                     /region_name="PycA"
                     /note="Pyruvate carboxylase [Energy production and
                     conversion]; COG1038"
                     /db_xref="CDD:440660"
     CDS             1..82
                     /gene="LOC121352823"
                     /coded_by="XM_041466089.1:<1..>247"
                     /db_xref="GeneID:121352823"
ORIGIN      
        1 pltpavpaga ppaglravlq regpggfara lrghrglllt dttfrdahqs llatrvrtrd
       61 larvapfvah alsplcsmet wg
//
LOCUS       XP_041322024             441 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar pre-ribosomal-associated protein 1-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322024
VERSION     XP_041322024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518918.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="nucleolar pre-ribosomal-associated protein
                     1-like isoform X1"
                     /calculated_mol_wt=49450
     CDS             1..441
                     /gene="LOC121352824"
                     /coded_by="XM_041466090.1:168..1493"
                     /db_xref="GeneID:121352824"
ORIGIN      
        1 mvqgvttdhr hvlskyfeai tkreelqtvg nvyprkshql eelhmymtaa qlkitlpmlq
       61 lpemsltdqk sekspkkgkq lnfygqilvk lltdsyqrhp qqgefllpte hikalgilms
      121 asaskdleev flqalqsepv lalavgvevq ahclaqcsht slaivamliq hsrthllqfe
      181 lwclssatgk ylrkrmesfl plinvylqcr dqygfsrpst gggtcafcsp nsclschtcp
      241 eespvegaqd tgasheatvk lqilskllpp leckrlhnlm dclpaalera gneeswavad
      301 aistvlknse elhswrrnll sacikglvam yssskdeskq eversillrl eellcvveev
      361 dpddlcclvk tglkyryrde tflkvlnvai qllykkessl sqslvklskl hmmvtqhslf
      421 lsailrsree dgtntqtrgi f
//
LOCUS       XP_041322025             434 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar pre-ribosomal-associated protein 1-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322025
VERSION     XP_041322025.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466091.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518918.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="nucleolar pre-ribosomal-associated protein
                     1-like isoform X2"
                     /calculated_mol_wt=49028
     CDS             1..434
                     /gene="LOC121352824"
                     /coded_by="XM_041466091.1:168..1472"
                     /db_xref="GeneID:121352824"
ORIGIN      
        1 mvqgvttdhr hvlskyfeai tkreelqtvg nvyprkshql eelhmymtaa qlkitlpmlq
       61 lpemsltdqk sekspkkgkq lnfygqilvk lltdsyqrhp qqgefllpte hikalgilms
      121 asaskdleev flqalqsepv lalavgvevq ahclaqcsht slaivamliq hsrthllqfe
      181 lwclssatgk ylrkrmesfl plinvylqcr dqygfsrpst vvsavtpvlr kalwkelcae
      241 iqdtgalhea svklqilskl lppleskrlh nlmdclpaal eragneeswa vadaistvlk
      301 nseelhswrr nllsacikgl vamyssskde skqeversil lrleellcvv eevdpddlcc
      361 lvktglkyry rdetflkvln vaiqllykke sslsqslvkl sklhmmvtqh slflsailrs
      421 reedgtntqt rgif
//
LOCUS       XP_041322027             222 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar pre-ribosomal-associated protein 1-like isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322027
VERSION     XP_041322027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518918.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="nucleolar pre-ribosomal-associated protein
                     1-like isoform X3"
                     /calculated_mol_wt=24940
     CDS             1..222
                     /gene="LOC121352824"
                     /coded_by="XM_041466093.1:791..1459"
                     /db_xref="GeneID:121352824"
ORIGIN      
        1 mqrpvwlqpt fhsclschtc peespvegaq dtgasheatv klqilskllp pleckrlhnl
       61 mdclpaaler agneeswava daistvlkns eelhswrrnl lsacikglva myssskdesk
      121 qeversillr leellcvvee vdpddlcclv ktglkyryrd etflkvlnva iqllykkess
      181 lsqslvklsk lhmmvtqhsl flsailrsre edgtntqtrg if
//
LOCUS       XP_041322028              81 aa            linear   VRT 06-MAY-2021
DEFINITION  proteasome subunit beta type-5-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322028
VERSION     XP_041322028.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466094.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518927.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>81
                     /product="proteasome subunit beta type-5-like"
     Region          <13..81
                     /region_name="Ntn_hydrolase"
                     /note="The Ntn hydrolases (N-terminal nucleophile) are a
                     diverse superfamily of of enzymes that are activated
                     autocatalytically via an N-terminally lcated nucleophilic
                     amino acid. N-terminal nucleophile (NTN-) hydrolase
                     superfamily, which contains a...; cl00467"
                     /db_xref="CDD:469781"
     CDS             1..81
                     /gene="LOC121352826"
                     /coded_by="XM_041466094.1:<1..>244"
                     /db_xref="GeneID:121352826"
ORIGIN      
        1 prprdpaplc lppglyyvds egqrvagaaf avgsgssyay gvldrglrre ppaspgaace
       61 lgrraiyhaa rrdaysggtv r
//
LOCUS       XP_041322030              86 aa            linear   VRT 06-MAY-2021
DEFINITION  IQ motif and SEC7 domain-containing protein 2-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322030
VERSION     XP_041322030.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466096.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518941.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>86
                     /product="IQ motif and SEC7 domain-containing protein
                     2-like"
     CDS             1..86
                     /gene="LOC121352828"
                     /coded_by="XM_041466096.1:<1..>257"
                     /db_xref="GeneID:121352828"
ORIGIN      
        1 ptdrwggppe epprrgppcl ecrgrgaggg hpplltvepp sdssadlsdr sdrgsinrgg
       61 pyepegtggg tlprsgpphr cfhpeg
//
LOCUS       XP_041322031             745 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322031
VERSION     XP_041322031.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466097.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..745
                     /product="kelch-like protein 1 isoform X1"
                     /calculated_mol_wt=81685
     Region          203..725
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          493..536
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          540..584
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          587..630
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          634..684
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          687..731
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..745
                     /gene="KLHL1"
                     /coded_by="XM_041466097.1:1..2238"
                     /db_xref="GeneID:121352829"
ORIGIN      
        1 msgsgrkdfd vkhilrlrwk lfshpspagg pagggclppd ssfehwgpsq srllksqerg
       61 ngvfwkksas sasssaatta sppngtllpa sgrpatghgp gpppprtvfy vesleeveee
      121 avpggmevar epekplapae reeapggcad ggsratgdgg ghrlsgashp lpphcdmdsc
      181 sseefyqavh haeqtfrkme sylkqqqlcd viliagdrki pahrlvlssv sdyfaamfts
      241 dvceakqeei kmegidpnal wdlvqfaytg clelkedtie nllaaacllq lpqvvevcch
      301 flmkllhpsn clgirafada qgctelmkva hnytmenime virnqeflll paeelhklla
      361 sddvnvpdee tifhalmmwv kydmqrrcnd lsmllayirl pllppqilad lenhalfkdd
      421 lecqklilea mkyhllperr tlmqsprtkp rkstvgtlya vggmdnnkga ttiekydlrt
      481 niwiqagvmn grrlqfgvav iddklfvigg rdglktlntv ecynpktkaw tvlppmsthr
      541 hglgvtvleg piyavgghdg wsylntverw dpqsqqwtfv asmsiarstv gvaalngkly
      601 svggrdgssc lssmeyydph tnkwnmcapm ckrrggvgva tcdgflyavg ghdapasnhc
      661 srlldyvery dpktdtwtmv aplsmprdav gvcllgdkly avggydgqsy lntmeaydpq
      721 tnewtqmasl nigragacvv vikqp
//
LOCUS       XP_041322032             684 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322032
VERSION     XP_041322032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="kelch-like protein 1 isoform X2"
                     /calculated_mol_wt=74751
     Region          161..664
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          432..475
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          479..523
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          526..569
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          573..623
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          626..670
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..684
                     /gene="KLHL1"
                     /coded_by="XM_041466098.1:1..2055"
                     /db_xref="GeneID:121352829"
ORIGIN      
        1 msgsgrkdfd vkhilrlrwk lfshpspagg pagggclppd ssfehwgpsq srllksqerg
       61 ngvfwkksas sasssaatta sppngtllpa sgrpatghgp gpppprtvfy vesleeveee
      121 avpggmevar epekplapae reeapggcad ggsratgdgg ghrlvlssvs dyfaamftsd
      181 vceakqeeik megidpnalw dlvqfaytgc lelkedtien llaaacllql pqvvevcchf
      241 lmkllhpsnc lgirafadaq gctelmkvah nytmenimev irnqeflllp aeelhkllas
      301 ddvnvpdeet ifhalmmwvk ydmqrrcndl smllayirlp llppqiladl enhalfkddl
      361 ecqklileam kyhllperrt lmqsprtkpr kstvgtlyav ggmdnnkgat tiekydlrtn
      421 iwiqagvmng rrlqfgvavi ddklfviggr dglktlntve cynpktkawt vlppmsthrh
      481 glgvtvlegp iyavgghdgw sylntverwd pqsqqwtfva smsiarstvg vaalngklys
      541 vggrdgsscl ssmeyydpht nkwnmcapmc krrggvgvat cdgflyavgg hdapasnhcs
      601 rlldyveryd pktdtwtmva plsmprdavg vcllgdklya vggydgqsyl ntmeaydpqt
      661 newtqmasln igragacvvv ikqp
//
LOCUS       XP_041322033             223 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: coiled-coil domain-containing protein 70,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322033
VERSION     XP_041322033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466099.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024518984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 16% of CDS bases
            frameshifts          :: corrected 3 indels
            internal stop codons :: corrected 4 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..223
                     /product="LOW QUALITY PROTEIN: coiled-coil
                     domain-containing protein 70"
     CDS             1..223
                     /gene="CCDC70"
                     /coded_by="XM_041466099.1:<1..672"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 4 bases in 3 codons;
                     substituted 4 bases at 4 genomic stop codons"
                     /db_xref="GeneID:121352830"
ORIGIN      
        1 fnqxwkenlv fqeenqnfwq knkxfhienk ayyqenlsvr xqnkilweqn kilqkrhrds
       61 seetknlekq qkacqqnkal reeikslkgy exayalkgka lqheilalxe nhkafkdqlr
      121 alqednkaiq veekavceek xffheekfal qegnmplqir krpxkkalqe qhrdlhewnn
      181 ilqekeqghr gkepfawgdf aaglksldkt vifvvgqlsa sng
//
LOCUS       XP_041322035             145 aa            linear   VRT 06-MAY-2021
DEFINITION  molybdopterin synthase catalytic subunit [Pyrgilauda ruficollis].
ACCESSION   XP_041322035
VERSION     XP_041322035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519007.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..145
                     /product="molybdopterin synthase catalytic subunit"
                     /calculated_mol_wt=16098
     Region          17..126
                     /region_name="MoaE"
                     /note="MoaE protein; pfam02391"
                     /db_xref="CDD:460546"
     Site            order(25,29,34,36..40,42,44,99,108,110,118,122)
                     /site_type="other"
                     /note="MoaE homodimer interface [polypeptide binding]"
                     /db_xref="CDD:238385"
     Site            order(58,60,63,66,70,89,125..126,128,130..132)
                     /site_type="other"
                     /note="MoaD interaction [polypeptide binding]"
                     /db_xref="CDD:238385"
     Site            order(125,132)
                     /site_type="active"
                     /note="active site residues [active]"
                     /db_xref="CDD:238385"
     CDS             1..145
                     /gene="LOC121352831"
                     /coded_by="XM_041466101.1:37..474"
                     /db_xref="GeneID:121352831"
ORIGIN      
        1 meesedvpkd fiklksekls vdevselvvs pycgavslfi gttrnnfegk kvihleyeay
       61 tsmaeteikk icrdvrqkwp svkhvavhhr lgvvpiteas viiavssphr aesleavmyc
      121 intlkacvpi wkkvrlgtks nlglc
//
LOCUS       XP_041322036             123 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase PAK 3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322036
VERSION     XP_041322036.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466102.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519018.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..123
                     /product="serine/threonine-protein kinase PAK 3-like"
                     /calculated_mol_wt=13998
     Region          <1..99
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..123
                     /gene="LOC121352832"
                     /coded_by="XM_041466102.1:46..417"
                     /db_xref="GeneID:121352832"
ORIGIN      
        1 mvgtahwmap evvtrspygp kvdiwsfgiv tiemvegepp yfretaamar alirqngtpq
       61 lqeprrlsal lrdflecsle pdeerrwaaq ellqhpflss akplcsltpl itaakqrreq
      121 rrr
//
LOCUS       XP_041322037             156 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin heavy chain-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322037
VERSION     XP_041322037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466103.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519051.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>156
                     /product="kinesin heavy chain-like"
     CDS             1..156
                     /gene="LOC121352833"
                     /coded_by="XM_041466103.1:<1..>468"
                     /db_xref="GeneID:121352833"
ORIGIN      
        1 ntasvnlelt aeqwkkkfek ekeknkalre tlqrleaels rwrsgeavpe teqlseseag
       61 tgpgegqggv peepplndns ssivihisde erhkyeeeir klykqlddkh gaaraevtev
      121 laaleelars ydrkaqeaed tgrhnrrlad elarte
//
LOCUS       XP_041322038              85 aa            linear   VRT 06-MAY-2021
DEFINITION  NAD(P)(+)--arginine ADP-ribosyltransferase 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322038
VERSION     XP_041322038.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466104.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519056.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>85
                     /product="NAD(P)(+)--arginine ADP-ribosyltransferase
                     1-like"
     Region          <2..85
                     /region_name="VIP2"
                     /note="A family of actin-ADP-ribosylating toxin. A member
                     of the Bacillus-prodiced vegetative insecticidal proteins
                     (VIPs) possesses high specificity against the major insect
                     pest, corn rootworms, and belongs to a classs of binary
                     toxins and regulators of...; cl00173"
                     /db_xref="CDD:469640"
     CDS             1..85
                     /gene="LOC121352834"
                     /coded_by="XM_041466104.1:<1..>255"
                     /db_xref="GeneID:121352834"
ORIGIN      
        1 ftqalgtlrd aqgprchrvf rgvrgvrfaa rrgdavrfgh fasaslrnes swgfgtdaaf
       61 qvltcqgvai refsffphee evlip
//
LOCUS       XP_041322039             543 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322039
VERSION     XP_041322039.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466105.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..543
                     /product="excitatory amino acid transporter 1 isoform X1"
                     /calculated_mol_wt=59216
     Region          46..497
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..543
                     /gene="SLC1A3"
                     /coded_by="XM_041466105.1:1..1632"
                     /db_xref="GeneID:121352835"
ORIGIN      
        1 mtkgngedpk pgsrmeriqq gvrkrtllak kkvqsitkdd vksylmrnaf vlftvvavil
       61 gvilgfslrs ykmsyrevky fsfpgellmr mlqmlvlpli vsslvtgiaa ldskasgkmg
      121 vravvyymst tiiavligii ivviihpgkg tkenmhregk ivqvtaadaf ldlirnmfpp
      181 nlveacfkqf ktnyekrkfk vaipsndtst vtsiisnvse amealtrmke eivpvpgsvn
      241 gvnalglvvf sisfglvigs mreqgqalkd ffdslneaim rlvalimwya plgilfliag
      301 kivemedmgv iggqlamytv tviiglliha vivlpllyfv itrknpwvfi ggliqalvta
      361 lgtssssatl pvtfkcleei ngvdkrvtrf vlpvgatinm dgtalyeala aifiaqvnnf
      421 dlnfgqiiti sitataasig aagipqaglv tmvivltsvg lptdditlii avdwfldrlr
      481 tttnvlgdsi gagivehlsr helknrdaem gnsvieenem kkpyqlisqe nenekpidse
      541 tkm
//
LOCUS       XP_041322040             498 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322040
VERSION     XP_041322040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="excitatory amino acid transporter 1 isoform X2"
                     /calculated_mol_wt=54793
     Region          46..452
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..498
                     /gene="SLC1A3"
                     /coded_by="XM_041466106.1:1..1497"
                     /db_xref="GeneID:121352835"
ORIGIN      
        1 mtkgngedpk pgsrmeriqq gvrkrtllak kkvqsitkdd vksylmrnaf vlftvvavil
       61 gvilgfslrs ykmsyrevky fsfpgellmr mlqmlvlpli vsslvtgiaa ldskasgkmg
      121 vravvyymst tiiavligii ivviihpgkg tkenmhregk ivqvtaadaf ldlirnmfpp
      181 nlveacfkqf ktnyekrkfk vaipsndtst vtsiisnvse amealtrmke eivpvpgsvn
      241 gvnalglvvf sisfglvigs mreqgqalkd ffdslneaim rlvalimwya plgilfliag
      301 kivemedmgv iggqlamytv tviiglliha vivlpllyfv itrknpwvfi ggliqalvta
      361 lgtssssatl pvtfkcleei ngvdkrvtrf vlpvgatinm dgtalyeala aifiaqvnnf
      421 dlnfgqiiti rdrlrtttnv lgdsigagiv ehlsrhelkn rdaemgnsvi eenemkkpyq
      481 lisqenenek pidsetkm
//
LOCUS       XP_041322041             497 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322041
VERSION     XP_041322041.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466107.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="excitatory amino acid transporter 1 isoform X3"
                     /calculated_mol_wt=53920
     Region          55..451
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..497
                     /gene="SLC1A3"
                     /coded_by="XM_041466107.1:1..1494"
                     /db_xref="GeneID:121352835"
ORIGIN      
        1 mtkgngedpk pgsrmeriqq gvrkrtllak kkvqsitkdd vksylmrnaf vlftvvavil
       61 giaaldskas gkmgvravvy ymsttiiavl igiiivviih pgkgtkenmh regkivqvta
      121 adafldlirn mfppnlveac fkqfktnyek rkfkvaipsn dtstvtsiis nvseamealt
      181 rmkeeivpvp gsvngvnalg lvvfsisfgl vigsmreqgq alkdffdsln eaimrlvali
      241 mwyaplgilf liagkiveme dmgviggqla mytvtviigl lihavivlpl lyfvitrknp
      301 wvfiggliqa lvtalgtsss satlpvtfkc leeingvdkr vtrfvlpvga tinmdgtaly
      361 ealaaifiaq vnnfdlnfgq iitisitata asigaagipq aglvtmvivl tsvglptddi
      421 tliiavdwfl drlrtttnvl gdsigagive hlsrhelknr daemgnsvie enemkkpyql
      481 isqenenekp idsetkm
//
LOCUS       XP_041322042             430 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322042
VERSION     XP_041322042.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466108.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..430
                     /product="excitatory amino acid transporter 1 isoform X4"
                     /calculated_mol_wt=46715
     Region          46..384
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..430
                     /gene="SLC1A3"
                     /coded_by="XM_041466108.1:1..1293"
                     /db_xref="GeneID:121352835"
ORIGIN      
        1 mtkgngedpk pgsrmeriqq gvrkrtllak kkvqsitkdd vksylmrnaf vlftvvavil
       61 gvilgfslrs ykmsyrevky fsfpgellmr mlqmlvlpli vsslvtgiaa ldskasgkmg
      121 vravvyymst tiiavligii ivviihpgkg tkenmhregk ivqvtaadaf ldliryaplg
      181 ilfliagkiv emedmgvigg qlamytvtvi igllihaviv lpllyfvitr knpwvfiggl
      241 iqalvtalgt ssssatlpvt fkcleeingv dkrvtrfvlp vgatinmdgt alyealaaif
      301 iaqvnnfdln fgqiitisit ataasigaag ipqaglvtmv ivltsvglpt dditliiavd
      361 wfldrlrttt nvlgdsigag ivehlsrhel knrdaemgns vieenemkkp yqlisqenen
      421 ekpidsetkm
//
LOCUS       XP_041322043             688 aa            linear   VRT 06-MAY-2021
DEFINITION  G-protein coupled receptor-associated protein LMBRD2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322043
VERSION     XP_041322043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="G-protein coupled receptor-associated protein
                     LMBRD2 isoform X1"
                     /calculated_mol_wt=80126
     Region          22..543
                     /region_name="LMBR1"
                     /note="LMBR1-like membrane protein; pfam04791"
                     /db_xref="CDD:461429"
     CDS             1..688
                     /gene="LMBRD2"
                     /coded_by="XM_041466109.1:227..2293"
                     /db_xref="GeneID:121352837"
ORIGIN      
        1 msgaalglei vfvfflalfl lhrygdfkkq hrlviiatll awylcflivf ilpldvstti
       61 ynrcklavns spaesngsyv tlapskqkcf kpwsyipdgi mpifwrvvyw tsqfltwill
      121 pfmqsyarsg gfsitgkikt alienaiyyg tyllifgafl iyvavnpnfn lqwnqlqtig
      181 iaaantwglf llvlllgygl veiprshwng akrgyllmkt yfkaaklmte kadaeenled
      241 imeevrkvse sikynhplrk cvdtilkkcp teyqermgrn mddyedfder qnsypseksl
      301 aklhkqviys vqrhrrtqvq wqilleqafy ledvakness atrqfvhtfh sqepenkiiq
      361 yfytptvewy wecllrpwfy rvlavvlatf svivvwsect ffstkpvlsl favfiqlaek
      421 tynyiyiema cfltifflsi cvystvfrir vfnyyylash hqtdaysllf sgmlfcrltp
      481 plclnflglt hmdatishkk tqptaytsim gsmrvlsfia dgfyiyypml vvilciatyf
      541 slgtrclnll gfqqfmgdse mtsdlidegk elirrekrkr qrqeegenrr rewkerygnr
      601 ddstrsravh tdqkessfse tnanrslsky trsngrterd riellqdaep ldfnadsvnd
      661 dplesdsgry qpggrylsms rskifddv
//
LOCUS       XP_041322044             688 aa            linear   VRT 06-MAY-2021
DEFINITION  G-protein coupled receptor-associated protein LMBRD2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322044
VERSION     XP_041322044.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466110.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="G-protein coupled receptor-associated protein
                     LMBRD2 isoform X1"
                     /calculated_mol_wt=80126
     Region          22..543
                     /region_name="LMBR1"
                     /note="LMBR1-like membrane protein; pfam04791"
                     /db_xref="CDD:461429"
     CDS             1..688
                     /gene="LMBRD2"
                     /coded_by="XM_041466110.1:227..2293"
                     /db_xref="GeneID:121352837"
ORIGIN      
        1 msgaalglei vfvfflalfl lhrygdfkkq hrlviiatll awylcflivf ilpldvstti
       61 ynrcklavns spaesngsyv tlapskqkcf kpwsyipdgi mpifwrvvyw tsqfltwill
      121 pfmqsyarsg gfsitgkikt alienaiyyg tyllifgafl iyvavnpnfn lqwnqlqtig
      181 iaaantwglf llvlllgygl veiprshwng akrgyllmkt yfkaaklmte kadaeenled
      241 imeevrkvse sikynhplrk cvdtilkkcp teyqermgrn mddyedfder qnsypseksl
      301 aklhkqviys vqrhrrtqvq wqilleqafy ledvakness atrqfvhtfh sqepenkiiq
      361 yfytptvewy wecllrpwfy rvlavvlatf svivvwsect ffstkpvlsl favfiqlaek
      421 tynyiyiema cfltifflsi cvystvfrir vfnyyylash hqtdaysllf sgmlfcrltp
      481 plclnflglt hmdatishkk tqptaytsim gsmrvlsfia dgfyiyypml vvilciatyf
      541 slgtrclnll gfqqfmgdse mtsdlidegk elirrekrkr qrqeegenrr rewkerygnr
      601 ddstrsravh tdqkessfse tnanrslsky trsngrterd riellqdaep ldfnadsvnd
      661 dplesdsgry qpggrylsms rskifddv
//
LOCUS       XP_041322045             688 aa            linear   VRT 06-MAY-2021
DEFINITION  G-protein coupled receptor-associated protein LMBRD2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322045
VERSION     XP_041322045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="G-protein coupled receptor-associated protein
                     LMBRD2 isoform X1"
                     /calculated_mol_wt=80126
     Region          22..543
                     /region_name="LMBR1"
                     /note="LMBR1-like membrane protein; pfam04791"
                     /db_xref="CDD:461429"
     CDS             1..688
                     /gene="LMBRD2"
                     /coded_by="XM_041466111.1:227..2293"
                     /db_xref="GeneID:121352837"
ORIGIN      
        1 msgaalglei vfvfflalfl lhrygdfkkq hrlviiatll awylcflivf ilpldvstti
       61 ynrcklavns spaesngsyv tlapskqkcf kpwsyipdgi mpifwrvvyw tsqfltwill
      121 pfmqsyarsg gfsitgkikt alienaiyyg tyllifgafl iyvavnpnfn lqwnqlqtig
      181 iaaantwglf llvlllgygl veiprshwng akrgyllmkt yfkaaklmte kadaeenled
      241 imeevrkvse sikynhplrk cvdtilkkcp teyqermgrn mddyedfder qnsypseksl
      301 aklhkqviys vqrhrrtqvq wqilleqafy ledvakness atrqfvhtfh sqepenkiiq
      361 yfytptvewy wecllrpwfy rvlavvlatf svivvwsect ffstkpvlsl favfiqlaek
      421 tynyiyiema cfltifflsi cvystvfrir vfnyyylash hqtdaysllf sgmlfcrltp
      481 plclnflglt hmdatishkk tqptaytsim gsmrvlsfia dgfyiyypml vvilciatyf
      541 slgtrclnll gfqqfmgdse mtsdlidegk elirrekrkr qrqeegenrr rewkerygnr
      601 ddstrsravh tdqkessfse tnanrslsky trsngrterd riellqdaep ldfnadsvnd
      661 dplesdsgry qpggrylsms rskifddv
//
LOCUS       XP_041322046             551 aa            linear   VRT 06-MAY-2021
DEFINITION  G-protein coupled receptor-associated protein LMBRD2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322046
VERSION     XP_041322046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466112.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="G-protein coupled receptor-associated protein
                     LMBRD2 isoform X2"
                     /calculated_mol_wt=64039
     Region          22..541
                     /region_name="LMBR1"
                     /note="LMBR1-like membrane protein; pfam04791"
                     /db_xref="CDD:461429"
     CDS             1..551
                     /gene="LMBRD2"
                     /coded_by="XM_041466112.1:227..1882"
                     /db_xref="GeneID:121352837"
ORIGIN      
        1 msgaalglei vfvfflalfl lhrygdfkkq hrlviiatll awylcflivf ilpldvstti
       61 ynrcklavns spaesngsyv tlapskqkcf kpwsyipdgi mpifwrvvyw tsqfltwill
      121 pfmqsyarsg gfsitgkikt alienaiyyg tyllifgafl iyvavnpnfn lqwnqlqtig
      181 iaaantwglf llvlllgygl veiprshwng akrgyllmkt yfkaaklmte kadaeenled
      241 imeevrkvse sikynhplrk cvdtilkkcp teyqermgrn mddyedfder qnsypseksl
      301 aklhkqviys vqrhrrtqvq wqilleqafy ledvakness atrqfvhtfh sqepenkiiq
      361 yfytptvewy wecllrpwfy rvlavvlatf svivvwsect ffstkpvlsl favfiqlaek
      421 tynyiyiema cfltifflsi cvystvfrir vfnyyylash hqtdaysllf sgmlfcrltp
      481 plclnflglt hmdatishkk tqptaytsim gsmrvlsfia dgfyiyypml vvilciatyf
      541 rekktteagg r
//
LOCUS       XP_041322047             442 aa            linear   VRT 06-MAY-2021
DEFINITION  S-phase kinase-associated protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322047
VERSION     XP_041322047.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466113.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..442
                     /product="S-phase kinase-associated protein 2 isoform X1"
                     /calculated_mol_wt=48889
     Region          116..156
                     /region_name="F-box_FBXL1"
                     /note="F-box domain found in F-box/LRR-repeat protein 1
                     (FBXL1) and similar proteins; cd22114"
                     /db_xref="CDD:438886"
     Site            order(116,118..123,126..127,131,135,138..139,142,146,153)
                     /site_type="other"
                     /note="Skp1/Cul1 binding site [polypeptide binding]"
                     /db_xref="CDD:438886"
     Region          179..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <197..>383
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          202..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          227..250
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          251..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          277..302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          303..329
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          330..354
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          355..374
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..442
                     /gene="SKP2"
                     /coded_by="XM_041466113.1:16..1344"
                     /db_xref="GeneID:121352838"
ORIGIN      
        1 mlqgspscvw cqsgstlras gfccvcrkhl qeipssstnv stslewdpgk tsellsgmgv
       61 salkkdklgn entpqdllvs ssclppkrqk vkdnekdfvi vrrpwllrea esgiyldalp
      121 delllaifay lplkdllkvs mickrwhrls fdeslwqtld ltggnllpgv lgqllpagvt
      181 vfrcprscig dplfktsnll kiqhldlsnc tvsaadlhsi lclceklqnl sleglvlsdn
      241 iiksiarnps lirlnlcgcs afsaealelm lsscsmleel nlswceftas hvkaavnhvt
      301 skitqlnlsg yrenlqiadv ktlvercpll vhldlsdsmm lkpecfqyfk qlgflqhlcl
      361 srcyqispaa lvelgeirtl ktlqvfgivt dsslqlleea lpdmkingsh ftsiarptvg
      421 nkksheiwgi kcrltlrnps fl
//
LOCUS       XP_041322048             418 aa            linear   VRT 06-MAY-2021
DEFINITION  S-phase kinase-associated protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322048
VERSION     XP_041322048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="S-phase kinase-associated protein 2 isoform X2"
                     /calculated_mol_wt=46490
     Region          92..132
                     /region_name="F-box_FBXL1"
                     /note="F-box domain found in F-box/LRR-repeat protein 1
                     (FBXL1) and similar proteins; cd22114"
                     /db_xref="CDD:438886"
     Site            order(92,94..99,102..103,107,111,114..115,118,122,129)
                     /site_type="other"
                     /note="Skp1/Cul1 binding site [polypeptide binding]"
                     /db_xref="CDD:438886"
     Region          155..177
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <173..>359
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          178..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          203..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          227..252
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          253..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          279..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          306..330
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          331..350
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..418
                     /gene="SKP2"
                     /coded_by="XM_041466114.1:125..1381"
                     /db_xref="GeneID:121352838"
ORIGIN      
        1 myrkhlqeip ssstnvstsl ewdpgktsel lsgmgvsalk kdklgnentp qdllvssscl
       61 ppkrqkvkdn ekdfvivrrp wllreaesgi yldalpdell laifaylplk dllkvsmick
      121 rwhrlsfdes lwqtldltgg nllpgvlgql lpagvtvfrc prscigdplf ktsnllkiqh
      181 ldlsnctvsa adlhsilclc eklqnlsleg lvlsdniiks iarnpslirl nlcgcsafsa
      241 ealelmlssc smleelnlsw ceftashvka avnhvtskit qlnlsgyren lqiadvktlv
      301 ercpllvhld lsdsmmlkpe cfqyfkqlgf lqhlclsrcy qispaalvel geirtlktlq
      361 vfgivtdssl qlleealpdm kingshftsi arptvgnkks heiwgikcrl tlrnpsfl
//
LOCUS       XP_041322049             271 aa            linear   VRT 06-MAY-2021
DEFINITION  calcyphosin-like protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322049
VERSION     XP_041322049.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466115.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="calcyphosin-like protein isoform X1"
                     /calculated_mol_wt=30952
     Region          107..246
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..271
                     /gene="CAPSL"
                     /coded_by="XM_041466115.1:11..826"
                     /db_xref="GeneID:121352839"
ORIGIN      
        1 mhvacllrag ahtlysslfv scmcdcptqm lplpiphqht lfwtaccfpc nrklwaafqq
       61 ipvkmgtarh dremaiiakk slpkitnple rlrmqclarg sagikglgra friidsnnsr
      121 tldfneflrg lhqyavmitk eeaqevfqlf dkdgsgtidf deflvtlrpp msnarkeivm
      181 qafqkldktg ngvitiedlr rtynakhhpk ylngdwtedq vfrafldnfd spydkdgkvt
      241 teefmnyyag vsasvdtdvy ftimmknvwk l
//
LOCUS       XP_041322050             222 aa            linear   VRT 06-MAY-2021
DEFINITION  calcyphosin-like protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322050
VERSION     XP_041322050.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466116.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="calcyphosin-like protein isoform X2"
                     /calculated_mol_wt=25375
     Region          58..197
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..222
                     /gene="CAPSL"
                     /coded_by="XM_041466116.1:1946..2614"
                     /db_xref="GeneID:121352839"
ORIGIN      
        1 mcpgfivalk yqhghmgtar hdremaiiak kslpkitnpl erlrmqclar gsagikglgr
       61 afriidsnns rtldfneflr glhqyavmit keeaqevfql fdkdgsgtid fdeflvtlrp
      121 pmsnarkeiv mqafqkldkt gngvitiedl rrtynakhhp kylngdwted qvfrafldnf
      181 dspydkdgkv tteefmnyya gvsasvdtdv yftimmknvw kl
//
LOCUS       XP_041322051             222 aa            linear   VRT 06-MAY-2021
DEFINITION  calcyphosin-like protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322051
VERSION     XP_041322051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="calcyphosin-like protein isoform X2"
                     /calculated_mol_wt=25375
     Region          58..197
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..222
                     /gene="CAPSL"
                     /coded_by="XM_041466117.1:345..1013"
                     /db_xref="GeneID:121352839"
ORIGIN      
        1 mcpgfivalk yqhghmgtar hdremaiiak kslpkitnpl erlrmqclar gsagikglgr
       61 afriidsnns rtldfneflr glhqyavmit keeaqevfql fdkdgsgtid fdeflvtlrp
      121 pmsnarkeiv mqafqkldkt gngvitiedl rrtynakhhp kylngdwted qvfrafldnf
      181 dspydkdgkv tteefmnyya gvsasvdtdv yftimmknvw kl
//
LOCUS       XP_041322052             207 aa            linear   VRT 06-MAY-2021
DEFINITION  calcyphosin-like protein isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322052
VERSION     XP_041322052.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466118.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="calcyphosin-like protein isoform X3"
                     /calculated_mol_wt=23692
     Region          43..182
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          45..100
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(51,53,55,62,87,89,91,98)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..207
                     /gene="CAPSL"
                     /coded_by="XM_041466118.1:1081..1704"
                     /db_xref="GeneID:121352839"
ORIGIN      
        1 mgtarhdrem aiiakkslpk itnplerlrm qclargsagi kglgrafrii dsnnsrtldf
       61 neflrglhqy avmitkeeaq evfqlfdkdg sgtidfdefl vtlrppmsna rkeivmqafq
      121 kldktgngvi tiedlrrtyn akhhpkylng dwtedqvfra fldnfdspyd kdgkvtteef
      181 mnyyagvsas vdtdvyftim mknvwkl
//
LOCUS       XP_041322053             207 aa            linear   VRT 06-MAY-2021
DEFINITION  calcyphosin-like protein isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322053
VERSION     XP_041322053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466119.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="calcyphosin-like protein isoform X3"
                     /calculated_mol_wt=23692
     Region          43..182
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          45..100
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(51,53,55,62,87,89,91,98)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..207
                     /gene="CAPSL"
                     /coded_by="XM_041466119.1:130..753"
                     /db_xref="GeneID:121352839"
ORIGIN      
        1 mgtarhdrem aiiakkslpk itnplerlrm qclargsagi kglgrafrii dsnnsrtldf
       61 neflrglhqy avmitkeeaq evfqlfdkdg sgtidfdefl vtlrppmsna rkeivmqafq
      121 kldktgngvi tiedlrrtyn akhhpkylng dwtedqvfra fldnfdspyd kdgkvtteef
      181 mnyyagvsas vdtdvyftim mknvwkl
//
LOCUS       XP_041322054             551 aa            linear   VRT 06-MAY-2021
DEFINITION  ran-binding protein 3-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322054
VERSION     XP_041322054.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466120.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="ran-binding protein 3-like isoform X1"
                     /calculated_mol_wt=60946
     Region          374..489
                     /region_name="RanBD_RanBP3"
                     /note="Ran-binding protein 3 Ran-binding domain; cd13180"
                     /db_xref="CDD:270001"
     Site            order(388,390..392,397..402,423,425,427..428,432..434,437,
                     439,443,447,455,457,468,472)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270001"
     CDS             1..551
                     /gene="RANBP3L"
                     /coded_by="XM_041466120.1:82..1737"
                     /db_xref="GeneID:121352841"
ORIGIN      
        1 mmrnepipac kgnvlcagtr cscagcdrpr rgakvpdlpk rrdwpggpra lqqaarlqeq
       61 tmprpcrgsr gsaldpkeec ftdksvlaqp tfifekkdrs lkrpaedpvc kaendfiscs
      121 skrarssslt fqksdsqsdt dtaltqqrgr sssfnilptf ppsqtvkknn ifmtsallqr
      181 npdiikstre gslspsqlwn virpatlqpp qaltcpeipv vslmtkkeac vqlsedssys
      241 stensvnskt avgssstmsl sssqktqsql lkersvqnss nsdfvfgenm vervlvgsah
      301 agrlfikspe rhpklckead lhkgeiisms tgsshvrpqt krpllrnatl iesaaacvsk
      361 pvnkilldkv evitgeeaeq nvlqincklf vfnklslswt ergrgslrln dtssnkhgml
      421 qsrlimrnqg slrlilntql weqmvikran rkslcftatd qedhsvqvfl aqasskdteh
      481 lyaaihhrlv alrsfaeqep dahqgdtese tafqplncds ddeddeeltq vsstgsdesk
      541 sqrlrtkttf s
//
LOCUS       XP_041322056             550 aa            linear   VRT 06-MAY-2021
DEFINITION  ran-binding protein 3-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322056
VERSION     XP_041322056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466122.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..550
                     /product="ran-binding protein 3-like isoform X2"
                     /calculated_mol_wt=60892
     Region          374..489
                     /region_name="RanBD_RanBP3"
                     /note="Ran-binding protein 3 Ran-binding domain; cd13180"
                     /db_xref="CDD:270001"
     Site            order(388,390..392,397..402,423,425,427..428,432..434,437,
                     439,443,447,455,457,468,472)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270001"
     CDS             1..550
                     /gene="RANBP3L"
                     /coded_by="XM_041466122.1:82..1734"
                     /db_xref="GeneID:121352841"
ORIGIN      
        1 mmrnepipac kgnvlcagtr cscagcdrpr rgakvpdlpk rrdwpggpra lqqaarlqeq
       61 tmprpcrgsr gsaldpkeec ftdksvlaqp tfifekkdrs lkrpaedpvc kaendfiscs
      121 skrarssslt fqksdsqsdt dtaltqqrgr sssfnilptf ppsqtvkknn ifmtsallqr
      181 npdiikstre gslspsqlwn virpatlqpp qaltcpeipv vslmtkkeac vqlsedssys
      241 stensvnskt avgssstmsl sssqktqsql lkersvqnss nsdfvfgenm vervlvgsah
      301 agrlfikspe rhpklckead lhkgeiisms tgsshvrpqt krpllrnatl iesaaacvsk
      361 pvnkilldkv evitgeeaeq nvlqincklf vfnklslswt ergrgslrln dtssnkhgml
      421 qsrlimrnqg slrlilntql weqmvikran rkslcftatd qedhsvqvfl aqasskdteh
      481 lyaaihhrlv alrsfaeqep dahqgdtese tafqplncds ddeddeeltq vsstgsdhsr
      541 wnrrqsvvcs
//
LOCUS       XP_041322057             442 aa            linear   VRT 06-MAY-2021
DEFINITION  NAD kinase 2, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041322057
VERSION     XP_041322057.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466123.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..442
                     /product="NAD kinase 2, mitochondrial"
                     /calculated_mol_wt=49496
     Region          95..>318
                     /region_name="DAGK_cat"
                     /note="Diacylglycerol kinase catalytic domain; cl01255"
                     /db_xref="CDD:445337"
     CDS             1..442
                     /gene="NADK2"
                     /coded_by="XM_041466123.1:1..1329"
                     /db_xref="GeneID:121352842"
ORIGIN      
        1 medaragysa qappprgagi rrrssllagp aaargeggaa gasgaagggf rpsrvvvvvk
       61 ttryefeqqr yryaglseed lkqllalkgs nyagllerhr ihtknvehvv dslrneriev
      121 rlvkrreyne etvrwadavi saggdgtmll aaskvfdkfk pvigintdpe rseghlclpv
      181 rythsfpeal qklyrgefrw qwrqrirlyl egtginttpv dlheqqlsqe qhsrahiner
      241 fqdqrsdisg phllpvraln evfigeslss renfksckps fkfslhrasy yeisvddgpw
      301 ekqkssglnv ctgtgskaws yninkvahqa ieeilkiakk hgslnmplnt elvqkvtndy
      361 nesllyspee pkmffsvrep ivnrvfsssr qrgfsskvcv rsrcwdacmv vdggtsfefn
      421 dgaiasilid tedslctvll ee
//
LOCUS       XP_041322058            2462 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: nipped-B-like protein, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322058
VERSION     XP_041322058.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466124.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>2462
                     /product="LOW QUALITY PROTEIN: nipped-B-like protein"
     Region          <482..907
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          1232..2303
                     /region_name="SCC2"
                     /note="Sister chromatid cohesion protein 2 and homologs;
                     cd23958"
                     /db_xref="CDD:467937"
     Region          1658..1686
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          1695..1721
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..2462
                     /gene="LOC121352843"
                     /coded_by="XM_041466124.1:215..>7600"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121352843"
ORIGIN      
        1 mngdmphvpi ttlagiaslt dllnqlplps plpatttksl lfngriaeev ncllacrden
       61 lvsqlvhsln qvstdhielk dnlgsddpeg dipvllqail arnpnvfrek smqnrygvqs
      121 gmmmsqfnis qnsmrgspas snyqqttish spssrfvppq tssgnrflaq qnspvpspya
      181 pqspagympy shppsytahp qmqqasvssp ivtagmrnlh enkvssqlsg nsanhhadns
      241 rhgsnedylq mvhrlssddg dpsirnaasf slrspqsvcs pagsdgalkg srqpliqqsq
      301 pppyssprdv ppdilldspe rkqkkqkkmk lgkdekdqte kaamydiiss pskdstkltl
      361 rlsrvrssdm dqqddmlsgl enssvsegdi pfnvqypgqt sktpvtpqdv nrplnaaqcl
      421 pqheqtaflq aqqvpvlqqn tsvaakqpqt pvvqtqqqvs qqgaitsyde veldalaeie
      481 rieresaier erfskevqdk dkplkkrkqe nkppeaggat ggnrtasqet gsagngarpa
      541 lmvsidlqqa gradsqatvt qdldtikkpe eikqyndgfm cvpqedtvgv lkfkpenhpe
      601 ifrkksdfes qktdiqqnen rqmefqqnes rrleskynes kqlevkhesr qmemkqnenr
      661 qtelkqnesr qmemkqnegk qnngkqeirq rpetpkqkse grpetpkqks egrpetpkhk
      721 hdnrrdpskp lsdkkmeisr hklevksdpp rmkpegrpdp tklrpdgrsv sdtprrdhds
      781 lkqrsedrae seryrgdpsk irrpeylrss nknehdskhg iksdgskpek farkhrhesg
      841 esrerfssgd qkarpdspri kqegrgdsnk srpdkpgfks qnskdeqrtd gnkskvnsnk
      901 ahadskaefp syllgarsga lkhfvipkik rdkdgnvtqe srktefrgeh kdkvekiglv
      961 edlnkgakpv vvlqklsldd vqkfikdred ksrgscfkpn knksskpnkg sidqsvlkel
     1021 ppdllaeies tmplcervkm nkrkrstvne kpkyaeissd edndteeafe ssrkrhkkdr
     1081 deaweyeehd rrssgdhrrs ghyhegrris gsgryrnrsp ddsdmddysp ppslsevark
     1141 mkkkekqkkr kayepkltpe emmdsstfkr ftasienile nledmdftaf gdddeipqel
     1201 llgkhqlsel gsesakikam gimdklstdk tvkvlnilek niqdgsklst llnhnndted
     1261 eerlwrdlim ervtksadac ltainimtsp nmpkavyied vierviqytk fhlqntlypq
     1321 ydpvyrvdph gggvlsskak rakcsthkqr vivmlynkvc divsslsell eiqlltdtti
     1381 lqvssmgitp ffvenvselq lcaiklvtav fsryekhrql ileeiftsla rlptskrslr
     1441 nfrlnssdtd gepmyiqmvt alvlqliqcv vhlpsaekds nseeesnkkv dqdvlitnsy
     1501 etamrtaqnf lsiflkkcgs kqgeedyrpl fenfiqdlls tvnkpewpaa elllsllgrl
     1561 lvhqfsnkst emalrvasld ylgtvaarlr kdavtskmdq gslarilkqg rmfaqsfdiy
     1621 ltqilrvlge naiavrtkam kclsevvavd psilarldmq rgvhgrlmdn stsvreaave
     1681 llgrfvlcrp qlaeqyydml ierildtgis vrkrvikilr dicieqptfp kitemcvkmi
     1741 rrvndeegik klvnetfqkl wftptphhdk eamtrkilni tdvvaacrdt gydwfeqllq
     1801 nvsnexlnie hilkyeesls dsdnkgvnsg rlvacittlf lfskirpqlm vkhamtmqpy
     1861 lttkcstqnd fmvicnvaki lelvvplmeh psetflatie edlmkliiky gmtvvqhcvs
     1921 clgavvnkvt qnykfvwacf nryygalskl knqhqedpns tiltankpal lrslftvgal
     1981 crhfdfdqed fkgsskvnik dkvlellmyf tkhsdeevqt kaiiglgfaf iqhpslmfeq
     2041 evktlynsil sdkncsvnlk iqvlknlqty lqeedtrmqq adrdwkkvak qedlkemgdi
     2101 ssgmsssimq lylkqvleaf fhnqssvrhf alnvialtln qglihpvqcv pyliamgtdp
     2161 epsmrnkadq qlveidkkya gfihmkavag mkmsyqvqqa intcpkdpvr gfrhdesssa
     2221 lcshlysmir gnrqhrrafl isllnlfddt aktevnmlly iadnlacfpy qtqeeplfim
     2281 hhiditlsvs gsnllqsfke smvkdkkker kpssdeetes dshsgsgses eeeaskprrl
     2341 rkrvdsdsds deendinavm kclpensapl iefanvsqgi lyflfxkqhl knlcgfsdsk
     2401 iqkyspsesa kvydkainrk tgvhfhpkqt ldflrsdman skiteevkrs ivkqyldfkl
     2461 lm
//
LOCUS       XP_041328877             250 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328877
VERSION     XP_041328877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472943.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509111.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..250
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..250
                     /product="acrosin-like"
                     /calculated_mol_wt=27220
     Region          4..237
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            4
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(48,97,192)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(186,213,215)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..250
                     /gene="LOC121356475"
                     /coded_by="XM_041472943.1:1..753"
                     /db_xref="GeneID:121356475"
ORIGIN      
        1 mtrivggtga kpgawpwmvs iqhpwipgpg hwcggslita ewvltaahcf dkikkigiln
       61 vvigatqltq pgpgaqvrki kklfrhenyk krdisndial lelnepvqcs syiqvacvad
      121 ptlrvselqn cwiagwgsta egdssdvlqe akvqlidvql cnssgwyagk vhihnvcagy
      181 phgridtcqg dsggplmcqd nhadywwvvg vtswgrgcar akrpgiytst qyfydwilah
      241 mglspfgsas
//
LOCUS       XP_041328890             265 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328890
VERSION     XP_041328890.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472956.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509111.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..265
                     /product="acrosin-like"
                     /calculated_mol_wt=29127
     Region          16..252
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; smart00020"
                     /db_xref="CDD:214473"
     Site            17
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(61,110,207)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(201,228,230)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..265
                     /gene="LOC121356480"
                     /coded_by="XM_041472956.1:1..798"
                     /db_xref="GeneID:121356480"
ORIGIN      
        1 mvyeyeymdh ddsttrivgg adakpgawpw ivslkhpaip gtrhlcggsl itaewvltaa
       61 hcfdkirkig mvylvigatq ltkpghgaql rrikklvrhe hynpsdksnd iallelskpv
      121 dcnpyvqlac vadptlnlse lqncwvagwg staaraqnss dvlqeakvql idvqlcnssg
      181 wyagkvhihn vcagyphgri dtcqgdsggp lmcqeknsdf fwivgvtswg rgcarakrpg
      241 iytstqyfyd wigihiglet ienvs
//
LOCUS       XP_041328904             214 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 7-like [Pyrgilauda ruficollis].
ACCESSION   XP_041328904
VERSION     XP_041328904.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472970.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509122.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..214
                     /product="mitogen-activated protein kinase 7-like"
                     /calculated_mol_wt=22207
     Region          <1..58
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..214
                     /gene="LOC121356486"
                     /coded_by="XM_041472970.1:76..720"
                     /db_xref="GeneID:121356486"
ORIGIN      
        1 mlrfdprerv gvaealrhpf lakyhdpede pecvpafdfa fdrqaltkee ikaaivaeia
       61 dfharrdgir rqiapappaa vvgvanagnk agvdvnmanv daannavnad lnaamatvta
      121 angpawppca dvdmpspgpa pdcpmdsprv kaepgapaap aaapkrdgai sddtkaalka
      181 allksamrnk skdppcaape apegrrwggg lgrr
//
LOCUS       XP_041328918             117 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-1B-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041328918
VERSION     XP_041328918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472984.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509122.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..117
                     /product="syntaxin-1B-like"
     Region          <2..110
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     CDS             1..117
                     /gene="LOC121356491"
                     /coded_by="XM_041472984.1:<1..354"
                     /db_xref="GeneID:121356491"
ORIGIN      
        1 paqhstlsrk fvevmteyna tqskyrdrck driqrqleis egslggqgvt lgvkgslgam
       61 lverikmdsq mtkqalneie trhneiikle tsirelhdmf vdmamlvesq vtaghpe
//
LOCUS       XP_041328932             178 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 25 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328932
VERSION     XP_041328932.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041472998.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509133.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="coiled-coil domain-containing protein 25 isoform
                     X1"
                     /calculated_mol_wt=19160
     Region          <113..>142
                     /region_name="NFACT-R_1"
                     /note="NFACT protein RNA binding domain; pfam05670"
                     /db_xref="CDD:428576"
     CDS             1..178
                     /gene="CCDC25"
                     /coded_by="XM_041472998.1:138..674"
                     /db_xref="GeneID:121356495"
ORIGIN      
        1 mgkilgklak plgkvgkpwe kypwekweyl gkigknleks mgkscekren lgkngkslgk
       61 igknigksgq tlgkvgkrwe kwailgrsgq swpmgwrgae vgvaaprqgq svddipkevl
      121 sdcahlvkan siqgcklssv tvlsplyfhp flpvfagfcp vlagcklssv malspilv
//
LOCUS       XP_041328941             148 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 25 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328941
VERSION     XP_041328941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473007.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509133.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..148
                     /product="coiled-coil domain-containing protein 25 isoform
                     X2"
                     /calculated_mol_wt=15937
     Region          <113..>142
                     /region_name="NFACT-R_1"
                     /note="NFACT protein RNA binding domain; pfam05670"
                     /db_xref="CDD:428576"
     CDS             1..148
                     /gene="CCDC25"
                     /coded_by="XM_041473007.1:127..573"
                     /db_xref="GeneID:121356495"
ORIGIN      
        1 mgkilgklak plgkvgkpwe kypwekweyl gkigknleks mgkscekren lgkngkslgk
       61 igknigksgq tlgkvgkrwe kwailgrsgq swpmgwrgae vgvaaprqgq svddipkevl
      121 sdcahlvkan siqgcklssv talspilv
//
LOCUS       XP_041328953             174 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 25 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328953
VERSION     XP_041328953.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473019.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509133.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="coiled-coil domain-containing protein 25 isoform
                     X3"
                     /calculated_mol_wt=20143
     Region          <20..71
                     /region_name="NFACT-R_1"
                     /note="NFACT protein RNA binding domain; pfam05670"
                     /db_xref="CDD:428576"
     CDS             1..174
                     /gene="CCDC25"
                     /coded_by="XM_041473019.1:72..596"
                     /db_xref="GeneID:121356495"
ORIGIN      
        1 mgwrgaevgv aaprqgqsvd dipkevlsdc ahlvkansiq gcklssvtvv ytpwsnlrkt
       61 pdmdvgqigf hrskdvrsvt verraaeqlr rlertrverf pdlaaerecr dreergrrrm
      121 elqeqmsgwe clhweqreel rrkkemeelr sysslmkaen mssnqdgnds ddfm
//
LOCUS       XP_041328975             377 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121356509 [Pyrgilauda ruficollis].
ACCESSION   XP_041328975
VERSION     XP_041328975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509177.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="uncharacterized protein LOC121356509"
                     /calculated_mol_wt=41075
     CDS             1..377
                     /gene="LOC121356509"
                     /coded_by="XM_041473041.1:378..1511"
                     /db_xref="GeneID:121356509"
ORIGIN      
        1 mepqevpprq llerqvavva tlgevvaavt grhrdarqrv spvflraalg sftrnlceil
       61 dhgdvtslry fgvpslgral aafeatpeac dnaiaavvaw rkmvdalqgr wgqlaceaae
      121 lcaattqard pqdkaarrgt drdklvaagr wptvdwdwee eeevasvggt rdaweaaaas
      181 eeevaineee vamseeelaa neeeaainke evaikeeela tneeelatnk eevatsqatg
      241 eavvaasrar aaarrghwae aaleplqrlv aacdsaiaft rnmqfylwei nvilkfgdqa
      301 srdvlealea kvaefqqlwd asarlcreyl lgtlelidkl llspyggpgg psgpgsrvvt
      361 ercreaieni prllwgq
//
LOCUS       XP_041328992             259 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041328992
VERSION     XP_041328992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509188.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>259
                     /product="translation initiation factor IF-2-like"
     Region          <166..259
                     /region_name="Phostensin"
                     /note="Phostensin PP1-binding and SH3-binding region;
                     pfam13914"
                     /db_xref="CDD:464038"
     CDS             1..259
                     /gene="LOC121356516"
                     /coded_by="XM_041473058.1:231..>1008"
                     /db_xref="GeneID:121356516"
ORIGIN      
        1 mvknwtvles rggqgsvgtp gtvsghepka smtplvttlt appvtspvsp aggavpvsgv
       61 tvpvsssvpk pgvtdplssg svpvssgvpv sgdtaqvssg svpksgvtvp tssatvqvss
      121 svpvssatvp vssatlpvst svpsaprpls prrdppcppa cphpaltrrs gntitvrprr
      181 aagptagpag gpaggpgggp gggpggpagg pggpggaaep pkkryptaeq iqviggylal
      241 prsclakgep rrkklqmwf
//
LOCUS       XP_041329005             162 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium-transporting ATPase alpha chain 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329005
VERSION     XP_041329005.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473071.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509199.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..162
                     /product="potassium-transporting ATPase alpha chain
                     1-like"
     Region          <1..159
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     CDS             1..162
                     /gene="LOC121356523"
                     /coded_by="XM_041473071.1:<1..489"
                     /db_xref="GeneID:121356523"
ORIGIN      
        1 fpsvslayer aesdimhlrp rnprrdrlvn eplaaysyfq igaiqsfagf tdyfvamaqe
       61 gwwpllvlgl rprwedaheq elqdsygqqn rtllvaivfq vcigcflcyc pgmpnvfnfm
      121 pirfqwwlvp mpfgllilvy deirklgvrr hpgswwdrel yy
//
LOCUS       XP_041329020             403 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and
            dual-specificity protein phosphatase PTEN [Pyrgilauda ruficollis].
ACCESSION   XP_041329020
VERSION     XP_041329020.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473086.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase and dual-specificity protein phosphatase
                     PTEN"
                     /calculated_mol_wt=47123
     Region          24..181
                     /region_name="PTP_PTEN"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of phosphatase and tensin homolog; cd14509"
                     /db_xref="CDD:350359"
     Region          188..349
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     CDS             1..403
                     /gene="PTEN"
                     /coded_by="XM_041473086.1:160..1371"
                     /db_xref="GeneID:121356527"
ORIGIN      
        1 mtaiikeivs rnkrryqedg fdldltyiyp niiamgfpae rlegvyrnni ddvvrfldsk
       61 hknhykiynl caerhydtak fncrvaqypf edhnppqlel ikpfcedldq wlseddnhva
      121 aihckagkgr tgvmicayll hrgkflraqe aldfygevrt rdkkgvtips qrryvyyysy
      181 llknhldyrp vallfhkmmf etipmfssgt cnpqfvvyql kvkiftspsg psrredkymy
      241 fefpqplpvc gdikveffhk qnkmlkkdkm fhfwvntffi gldensdkve ngslvadqel
      301 dgifstersd ndkeyliltl tkndldkank dkanryfspn fkvklfftkt veepsnpeas
      361 sstsvtpdvs dnepdhyrys dttdsdpene pfdedqhtqi tkv
//
LOCUS       XP_041329032             597 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329032
VERSION     XP_041329032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..597
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X1"
                     /calculated_mol_wt=66949
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          465..592
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..597
                     /gene="CAMK2G"
                     /coded_by="XM_041473098.1:296..2089"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvkp qsnnktsivs taketppvqt smepqttvvh
      361 natdgikgst escntttede dlkapplstg dgssvlegrr hsesktqtes mqsqlslcfs
      421 attqsceekl hawdspgqtl elerarsepl ltpvvpfvln raplrkqeii kiteqlieai
      481 nngdfeaytk icdpgltsfe pealgnlveg mdfhkfyfen llsknskpih ttilnphvhv
      541 igedaaciay irltqyidgq grprttqsee trvwhrrdgk wlnvhyhcsg apaaplq
//
LOCUS       XP_041329041             585 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329041
VERSION     XP_041329041.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473107.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..585
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X2"
                     /calculated_mol_wt=65763
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          453..580
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..585
                     /gene="CAMK2G"
                     /coded_by="XM_041473107.1:297..2054"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvkk rkssssvhlm epqttvvhna tdgikgstes
      361 cntttededl kapplstgdg ssvlegrrhs esktqtesmq sqlslcfsat tqsceeklha
      421 wdspgqtlel erarsepllt pvvpfvlnra plrkqeiiki teqlieainn gdfeaytkic
      481 dpgltsfepe algnlvegmd fhkfyfenll sknskpihtt ilnphvhvig edaaciayir
      541 ltqyidgqgr prttqseetr vwhrrdgkwl nvhyhcsgap aaplq
//
LOCUS       XP_041329051             574 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041329051
VERSION     XP_041329051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..574
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X3"
                     /calculated_mol_wt=64522
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          442..569
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..574
                     /gene="CAMK2G"
                     /coded_by="XM_041473117.1:297..2021"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvke pqttvvhnat dgikgstesc ntttededlk
      361 applstgdgs svlegrrhse sktqtesmqs qlslcfsatt qsceeklhaw dspgqtlele
      421 rarseplltp vvpfvlnrap lrkqeiikit eqlieainng dfeaytkicd pgltsfepea
      481 lgnlvegmdf hkfyfenlls knskpihtti lnphvhvige daaciayirl tqyidgqgrp
      541 rttqseetrv whrrdgkwln vhyhcsgapa aplq
//
LOCUS       XP_041329062             555 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041329062
VERSION     XP_041329062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473128.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..555
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X4"
                     /calculated_mol_wt=62268
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          423..550
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..555
                     /gene="CAMK2G"
                     /coded_by="XM_041473128.1:294..1961"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvkp qsnnktsivs taketppvqt smepqttvvh
      361 natdgikgst escntttede dlkapplstg dgssvlegrr hsesktqtes mqsqlslcfs
      421 amrkqeiiki teqlieainn gdfeaytkic dpgltsfepe algnlvegmd fhkfyfenll
      481 sknskpihtt ilnphvhvig edaaciayir ltqyidgqgr prttqseetr vwhrrdgkwl
      541 nvhyhcsgap aaplq
//
LOCUS       XP_041329071             543 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041329071
VERSION     XP_041329071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..543
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X5"
                     /calculated_mol_wt=61082
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          411..538
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..543
                     /gene="CAMK2G"
                     /coded_by="XM_041473137.1:295..1926"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvkk rkssssvhlm epqttvvhna tdgikgstes
      361 cntttededl kapplstgdg ssvlegrrhs esktqtesmq sqlslcfsam rkqeiikite
      421 qlieainngd feaytkicdp gltsfepeal gnlvegmdfh kfyfenllsk nskpihttil
      481 nphvhviged aaciayirlt qyidgqgrpr ttqseetrvw hrrdgkwlnv hyhcsgapaa
      541 plq
//
LOCUS       XP_041329080             532 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041329080
VERSION     XP_041329080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..532
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X6"
                     /calculated_mol_wt=59840
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          400..527
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..532
                     /gene="CAMK2G"
                     /coded_by="XM_041473146.1:295..1893"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvke pqttvvhnat dgikgstesc ntttededlk
      361 applstgdgs svlegrrhse sktqtesmqs qlslcfsamr kqeiikiteq lieainngdf
      421 eaytkicdpg ltsfepealg nlvegmdfhk fyfenllskn skpihttiln phvhvigeda
      481 aciayirltq yidgqgrprt tqseetrvwh rrdgkwlnvh yhcsgapaap lq
//
LOCUS       XP_041329087             517 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041329087
VERSION     XP_041329087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X7"
                     /calculated_mol_wt=58244
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          385..512
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..517
                     /gene="CAMK2G"
                     /coded_by="XM_041473153.1:292..1845"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvkp qsnnktsivs taketppvqt smepqttvvh
      361 natdgikgst escntttede dlkvrkqeii kiteqlieai nngdfeaytk icdpgltsfe
      421 pealgnlveg mdfhkfyfen llsknskpih ttilnphvhv igedaaciay irltqyidgq
      481 grprttqsee trvwhrrdgk wlnvhyhcsg apaaplq
//
LOCUS       XP_041329095             505 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041329095
VERSION     XP_041329095.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473161.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..505
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X8"
                     /calculated_mol_wt=57057
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          373..500
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..505
                     /gene="CAMK2G"
                     /coded_by="XM_041473161.1:293..1810"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvkk rkssssvhlm epqttvvhna tdgikgstes
      361 cntttededl kvrkqeiiki teqlieainn gdfeaytkic dpgltsfepe algnlvegmd
      421 fhkfyfenll sknskpihtt ilnphvhvig edaaciayir ltqyidgqgr prttqseetr
      481 vwhrrdgkwl nvhyhcsgap aaplq
//
LOCUS       XP_041329103             494 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041329103
VERSION     XP_041329103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X9"
                     /calculated_mol_wt=55816
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          362..489
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..494
                     /gene="CAMK2G"
                     /coded_by="XM_041473169.1:293..1777"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvke pqttvvhnat dgikgstesc ntttededlk
      361 vrkqeiikit eqlieainng dfeaytkicd pgltsfepea lgnlvegmdf hkfyfenlls
      421 knskpihtti lnphvhvige daaciayirl tqyidgqgrp rttqseetrv whrrdgkwln
      481 vhyhcsgapa aplq
//
LOCUS       XP_041329112             608 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit gamma
            isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041329112
VERSION     XP_041329112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473178.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit gamma isoform X10"
                     /calculated_mol_wt=68191
     Region          12..303
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(20..24,28,41,43,74,90..93,97,99,135..136,138,
                     140..141,143,156..157,160,175..179,181)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(20..23,28,41,43,74,90..93,97,140..141,143,156..157)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(24,97,99,135..136,138,140,160,175..179,181)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(156..166,169..179)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(294,296..303)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          476..603
                     /region_name="CaMKII_AD"
                     /note="Calcium/calmodulin dependent protein kinase II
                     association domain; pfam08332"
                     /db_xref="CDD:285524"
     CDS             1..608
                     /gene="CAMK2G"
                     /coded_by="XM_041473178.1:298..2124"
                     /db_xref="GeneID:121356531"
ORIGIN      
        1 mattatctrf tdeyqlyeel gkgafsvvrr cvkknssqey aakiintkkl sardhqkler
       61 earicrllkh pnivrlhdsi seegfhylvf dlvtggelfe divareyyse adashcihqi
      121 lesvnhihqh divhrdlkpe nlllaskckg aavkladfgl aievqgeqqa wfgfagtpgy
      181 lspevlrkdp ygkpvdiwac gvilyillvg yppfwdedqh klyqqikaga ydfpspewdt
      241 vtpeaknlin qmltinpakr itadqalkhp wvcqrstvas mmhrqetvec lrkfnarrkl
      301 kgailttmlv srnfsaaksl lnkksdgvkk rkssssvhlm pqsnnktsiv staketppvq
      361 tsmepqttvv hnatdgikgs tescnttted edlkapplst gdgssvlegr rhsesktqte
      421 smqsqlslcf sattqsceek lhawdspgqt lelerarsep lltpvvpfvl nraplrkqei
      481 ikiteqliea inngdfeayt kicdpgltsf epealgnlve gmdfhkfyfe nllsknskpi
      541 httilnphvh vigedaacia yirltqyidg qgrprttqse etrvwhrrdg kwlnvhyhcs
      601 gapaaplq
//
LOCUS       XP_041329123            2520 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329123
VERSION     XP_041329123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473189.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2520
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X1"
                     /calculated_mol_wt=281120
     Region          1257..>1527
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2258..2330
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2362..2461
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2520
                     /gene="JMJD1C"
                     /coded_by="XM_041473189.1:194..7756"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mavetrpelv gkrflclgge eppesgrwra gviravsqrd shspdlavyv efddlewekr
       61 ewvkvyedfa aflveyqlvw akrkdpsqtq gskikqiqwp altfkplvgk svynsitave
      121 flvdkqldfi tedsafqpyq ddvdslnpvl rdnpqlheev kawvkeqkvq eifmqgpysl
      181 ngyrvrvyrq dsatqwftgi ithhdlftrt mvvmndqvle pqnvdpsmvq mtflddvvhs
      241 llkgenigit srrrsrsnqn sntvhghytr aqansprpam nsqaaaprqn shqqqrntrp
      301 nkrkgsdssm pdeekmkder ydyigrgenp ktknkhflsk rrkpeedekk lnvkrlrtdn
      361 isdysessds eisskrltds sseqnsenel ksknssking eegksqtteg veqtltdrqs
      421 pwdevqqdkn heeterlkss vldhqekssl haaeqptlye qnakdppvqd cnsekhhtve
      481 lkneqflprp ptpkcvvdvs nknssekenq dnaastfglq tvqkieshss dlkqqfanan
      541 flearkqead qswvssvgkt dliqpgvvkt lpvnehlnse kvqygsfmss lnvaslaees
      601 klrkqspvpd svkskssasv dhpktkspdv kpkftqssdt vkskvssqns hatgltrsan
      661 ktdhdlprss fhpvparvsa leatksplii dknehftvyr dptligqetg tnhispylhq
      721 hnyplhsssh rtclnpnahh paltgsshll agssaqapls ainthplssa shhsvhhphl
      781 lpavlpgvpa asllgahprl etahasslsh lalahqqqqq mlqhqsphll gqahpsasyn
      841 qlglypiiwq ypngthaysg lglpsskwvh petpvnaeas lrrntpspwl hqptpvtsad
      901 slglrshipv rpssadplrp lkltthsspp lsksivehrk eelerkafae plrsvttapv
      961 kseleqsrtq takeshmhrh yadpmlnqlp rppqetgerl skykeehrri lqesievapf
     1021 takmkalege renysrvtsl ssspkshsvk yekdaersvs elykmkhsvt qnlpqsnyft
     1081 tlsnsvvnep prsypskeas gvyvdkqssc pstaaspqal psyisslskp pplikhqpes
     1141 egstskipeq lsqsvqshsv nsfrsdsrsp tqlsvsssnt lrsmpalhra pvfhppvhqn
     1201 lekkessyss lspptltpvq pvnagggkiq elqkpptlvp epkeaqtvyk gtseqnlsem
     1261 wksnnapnne kvdwhterms gksqsatasv ivrppsstky envpvmqsas kdrvserssa
     1321 vtnladclkt aearetgrvi lpnvnsdsar tqyekkfaav sqgsipravt ptttiicstk
     1381 tdvtasaamt tsvssrgsse vtdsvssavs capesaapra agqaaqpqec kvstaapvts
     1441 aagsaaqpas gfststdfvh lkkhkaalaa aqfkssnaae tesnsvknqt fstslsldsa
     1501 ivcntinkan svgsgqtsqt sqpnyhtklk kawltrhsee dkntnkkdns gnsvseiikp
     1561 ctvnliasts ndlqnnidsk iladkfvked khprrkgkrt yesgsesgds deseskseqr
     1621 tkrqpkptyk kkqndlqkkk gdteeevkpn gvlsrsakek sklklqsgsn stgiprsvlk
     1681 dwrkvkklkq tgesflqdds cseigpnlqk crecrlirsk kgeepthspv fcrfyyfrrl
     1741 sfskngvvri dgfsspdqyd dealslwthe nyeddeldle tskyildiig dkfcqlvtse
     1801 ktamswvkkd akiawkravr gvremcdace atlfnihwvc qkcgfvvcld cykakerkss
     1861 rdkelyawmk cvkgqphdhk hlmptqiipg svltdlldam hnirekfeik shcqctikqn
     1921 tqagklpamn gvsqvlqnvl nhsnkislcm pesqqqntpq ksetngntsp rsdvstdskl
     1981 tppesqsplh wladlaeqka reekkenkec psgkhskegk dqdnlespnc kssppasqnn
     2041 eqgstlrdll tttagklrlg stdagiafap vystgtasgk sgrtmpnild diiasvvenk
     2101 ippnktpkin vkseikeepk ddkksiqddc skrysdiqys wicdkhvlwl rdhkntnnwk
     2161 lfkecwkqgr pvlvsgmhkk mnfslwkaes isldfgnqqa dilnckdsii sntnvkefwd
     2221 gfedvskrqk vkngetallk lkdwpsgedf kammparyed llkslplpey cspegklnla
     2281 shlpgffvrp dlgprlcsay gvaatkdhdi gttnlhievs dvvnilvyvg iakgngvlsk
     2341 sgvlkkleee dlddllrkrl kdsselpgal whiyagkdad kireflqkia keqglevlpe
     2401 hdpirdqswy vnkklrqrlf eeygvktctv iqflgdaiil pagalhqvqn fhscvqvted
     2461 fvspehlvqs fhltqelrls keeinyddkl qvknilyhav kemvralkih egemedmden
//
LOCUS       XP_041329134            2347 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329134
VERSION     XP_041329134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473200.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2347
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X2"
                     /calculated_mol_wt=261035
     Region          1084..>1354
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2085..2157
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2189..2288
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2347
                     /gene="JMJD1C"
                     /coded_by="XM_041473200.1:327..7370"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mqgpyslngy rvrvyrqdsa tqwftgiith hdlftrtmvv mndqvlepqn vdpsmvqmtf
       61 lddvvhsllk genigitsrr rsrsnqnsnt vhghytraqa nsprpamnsq aaaprqnshq
      121 qqrntrpnkr kgsdssmpde ekmkderydy igrgenpktk nkhflskrrk peedekklnv
      181 krlrtdnisd ysessdseis skrltdssse qnsenelksk nsskingeeg ksqttegveq
      241 tltdrqspwd evqqdknhee terlkssvld hqeksslhaa eqptlyeqna kdppvqdcns
      301 ekhhtvelkn eqflprpptp kcvvdvsnkn ssekenqdna astfglqtvq kieshssdlk
      361 qqfananfle arkqeadqsw vssvgktdli qpgvvktlpv nehlnsekvq ygsfmsslnv
      421 aslaeesklr kqspvpdsvk skssasvdhp ktkspdvkpk ftqssdtvks kvssqnshat
      481 gltrsanktd hdlprssfhp vparvsalea tkspliidkn ehftvyrdpt ligqetgtnh
      541 ispylhqhny plhssshrtc lnpnahhpal tgsshllags saqaplsain thplssashh
      601 svhhphllpa vlpgvpaasl lgahprleta hasslshlal ahqqqqqmlq hqsphllgqa
      661 hpsasynqlg lypiiwqypn gthaysglgl psskwvhpet pvnaeaslrr ntpspwlhqp
      721 tpvtsadslg lrshipvrps sadplrplkl tthsspplsk sivehrkeel erkafaeplr
      781 svttapvkse leqsrtqtak eshmhrhyad pmlnqlprpp qetgerlsky keehrrilqe
      841 sievapftak mkalegeren ysrvtslsss pkshsvkyek daersvsely kmkhsvtqnl
      901 pqsnyfttls nsvvnepprs ypskeasgvy vdkqsscpst aaspqalpsy isslskpppl
      961 ikhqpesegs tskipeqlsq svqshsvnsf rsdsrsptql svsssntlrs mpalhrapvf
     1021 hppvhqnlek kessysslsp ptltpvqpvn agggkiqelq kpptlvpepk eaqtvykgts
     1081 eqnlsemwks nnapnnekvd whtermsgks qsatasvivr ppsstkyenv pvmqsaskdr
     1141 vserssavtn ladclktaea retgrvilpn vnsdsartqy ekkfaavsqg sipravtptt
     1201 tiicstktdv tasaamttsv ssrgssevtd svssavscap esaapraagq aaqpqeckvs
     1261 taapvtsaag saaqpasgfs tstdfvhlkk hkaalaaaqf kssnaaetes nsvknqtfst
     1321 slsldsaivc ntinkansvg sgqtsqtsqp nyhtklkkaw ltrhseedkn tnkkdnsgns
     1381 vseiikpctv nliastsndl qnnidskila dkfvkedkhp rrkgkrtyes gsesgdsdes
     1441 eskseqrtkr qpkptykkkq ndlqkkkgdt eeevkpngvl srsakekskl klqsgsnstg
     1501 iprsvlkdwr kvkklkqtge sflqddscse igpnlqkcre crlirskkge epthspvfcr
     1561 fyyfrrlsfs kngvvridgf sspdqyddea lslwthenye ddeldletsk yildiigdkf
     1621 cqlvtsekta mswvkkdaki awkravrgvr emcdaceatl fnihwvcqkc gfvvcldcyk
     1681 akerkssrdk elyawmkcvk gqphdhkhlm ptqiipgsvl tdlldamhni rekfeikshc
     1741 qctikqntqa gklpamngvs qvlqnvlnhs nkislcmpes qqqntpqkse tngntsprsd
     1801 vstdskltpp esqsplhwla dlaeqkaree kkenkecpsg khskegkdqd nlespnckss
     1861 ppasqnneqg stlrdllttt agklrlgstd agiafapvys tgtasgksgr tmpnilddii
     1921 asvvenkipp nktpkinvks eikeepkddk ksiqddcskr ysdiqyswic dkhvlwlrdh
     1981 kntnnwklfk ecwkqgrpvl vsgmhkkmnf slwkaesisl dfgnqqadil nckdsiisnt
     2041 nvkefwdgfe dvskrqkvkn getallklkd wpsgedfkam mparyedllk slplpeycsp
     2101 egklnlashl pgffvrpdlg prlcsaygva atkdhdigtt nlhievsdvv nilvyvgiak
     2161 gngvlsksgv lkkleeedld dllrkrlkds selpgalwhi yagkdadkir eflqkiakeq
     2221 glevlpehdp irdqswyvnk klrqrlfeey gvktctviqf lgdaiilpag alhqvqnfhs
     2281 cvqvtedfvs pehlvqsfhl tqelrlskee inyddklqvk nilyhavkem vralkihege
     2341 medmden
//
LOCUS       XP_041329143            2347 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329143
VERSION     XP_041329143.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473209.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2347
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X2"
                     /calculated_mol_wt=261035
     Region          1084..>1354
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2085..2157
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2189..2288
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2347
                     /gene="JMJD1C"
                     /coded_by="XM_041473209.1:322..7365"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mqgpyslngy rvrvyrqdsa tqwftgiith hdlftrtmvv mndqvlepqn vdpsmvqmtf
       61 lddvvhsllk genigitsrr rsrsnqnsnt vhghytraqa nsprpamnsq aaaprqnshq
      121 qqrntrpnkr kgsdssmpde ekmkderydy igrgenpktk nkhflskrrk peedekklnv
      181 krlrtdnisd ysessdseis skrltdssse qnsenelksk nsskingeeg ksqttegveq
      241 tltdrqspwd evqqdknhee terlkssvld hqeksslhaa eqptlyeqna kdppvqdcns
      301 ekhhtvelkn eqflprpptp kcvvdvsnkn ssekenqdna astfglqtvq kieshssdlk
      361 qqfananfle arkqeadqsw vssvgktdli qpgvvktlpv nehlnsekvq ygsfmsslnv
      421 aslaeesklr kqspvpdsvk skssasvdhp ktkspdvkpk ftqssdtvks kvssqnshat
      481 gltrsanktd hdlprssfhp vparvsalea tkspliidkn ehftvyrdpt ligqetgtnh
      541 ispylhqhny plhssshrtc lnpnahhpal tgsshllags saqaplsain thplssashh
      601 svhhphllpa vlpgvpaasl lgahprleta hasslshlal ahqqqqqmlq hqsphllgqa
      661 hpsasynqlg lypiiwqypn gthaysglgl psskwvhpet pvnaeaslrr ntpspwlhqp
      721 tpvtsadslg lrshipvrps sadplrplkl tthsspplsk sivehrkeel erkafaeplr
      781 svttapvkse leqsrtqtak eshmhrhyad pmlnqlprpp qetgerlsky keehrrilqe
      841 sievapftak mkalegeren ysrvtslsss pkshsvkyek daersvsely kmkhsvtqnl
      901 pqsnyfttls nsvvnepprs ypskeasgvy vdkqsscpst aaspqalpsy isslskpppl
      961 ikhqpesegs tskipeqlsq svqshsvnsf rsdsrsptql svsssntlrs mpalhrapvf
     1021 hppvhqnlek kessysslsp ptltpvqpvn agggkiqelq kpptlvpepk eaqtvykgts
     1081 eqnlsemwks nnapnnekvd whtermsgks qsatasvivr ppsstkyenv pvmqsaskdr
     1141 vserssavtn ladclktaea retgrvilpn vnsdsartqy ekkfaavsqg sipravtptt
     1201 tiicstktdv tasaamttsv ssrgssevtd svssavscap esaapraagq aaqpqeckvs
     1261 taapvtsaag saaqpasgfs tstdfvhlkk hkaalaaaqf kssnaaetes nsvknqtfst
     1321 slsldsaivc ntinkansvg sgqtsqtsqp nyhtklkkaw ltrhseedkn tnkkdnsgns
     1381 vseiikpctv nliastsndl qnnidskila dkfvkedkhp rrkgkrtyes gsesgdsdes
     1441 eskseqrtkr qpkptykkkq ndlqkkkgdt eeevkpngvl srsakekskl klqsgsnstg
     1501 iprsvlkdwr kvkklkqtge sflqddscse igpnlqkcre crlirskkge epthspvfcr
     1561 fyyfrrlsfs kngvvridgf sspdqyddea lslwthenye ddeldletsk yildiigdkf
     1621 cqlvtsekta mswvkkdaki awkravrgvr emcdaceatl fnihwvcqkc gfvvcldcyk
     1681 akerkssrdk elyawmkcvk gqphdhkhlm ptqiipgsvl tdlldamhni rekfeikshc
     1741 qctikqntqa gklpamngvs qvlqnvlnhs nkislcmpes qqqntpqkse tngntsprsd
     1801 vstdskltpp esqsplhwla dlaeqkaree kkenkecpsg khskegkdqd nlespnckss
     1861 ppasqnneqg stlrdllttt agklrlgstd agiafapvys tgtasgksgr tmpnilddii
     1921 asvvenkipp nktpkinvks eikeepkddk ksiqddcskr ysdiqyswic dkhvlwlrdh
     1981 kntnnwklfk ecwkqgrpvl vsgmhkkmnf slwkaesisl dfgnqqadil nckdsiisnt
     2041 nvkefwdgfe dvskrqkvkn getallklkd wpsgedfkam mparyedllk slplpeycsp
     2101 egklnlashl pgffvrpdlg prlcsaygva atkdhdigtt nlhievsdvv nilvyvgiak
     2161 gngvlsksgv lkkleeedld dllrkrlkds selpgalwhi yagkdadkir eflqkiakeq
     2221 glevlpehdp irdqswyvnk klrqrlfeey gvktctviqf lgdaiilpag alhqvqnfhs
     2281 cvqvtedfvs pehlvqsfhl tqelrlskee inyddklqvk nilyhavkem vralkihege
     2341 medmden
//
LOCUS       XP_041329151            2347 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329151
VERSION     XP_041329151.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473217.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2347
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X2"
                     /calculated_mol_wt=261035
     Region          1084..>1354
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2085..2157
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2189..2288
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2347
                     /gene="JMJD1C"
                     /coded_by="XM_041473217.1:547..7590"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mqgpyslngy rvrvyrqdsa tqwftgiith hdlftrtmvv mndqvlepqn vdpsmvqmtf
       61 lddvvhsllk genigitsrr rsrsnqnsnt vhghytraqa nsprpamnsq aaaprqnshq
      121 qqrntrpnkr kgsdssmpde ekmkderydy igrgenpktk nkhflskrrk peedekklnv
      181 krlrtdnisd ysessdseis skrltdssse qnsenelksk nsskingeeg ksqttegveq
      241 tltdrqspwd evqqdknhee terlkssvld hqeksslhaa eqptlyeqna kdppvqdcns
      301 ekhhtvelkn eqflprpptp kcvvdvsnkn ssekenqdna astfglqtvq kieshssdlk
      361 qqfananfle arkqeadqsw vssvgktdli qpgvvktlpv nehlnsekvq ygsfmsslnv
      421 aslaeesklr kqspvpdsvk skssasvdhp ktkspdvkpk ftqssdtvks kvssqnshat
      481 gltrsanktd hdlprssfhp vparvsalea tkspliidkn ehftvyrdpt ligqetgtnh
      541 ispylhqhny plhssshrtc lnpnahhpal tgsshllags saqaplsain thplssashh
      601 svhhphllpa vlpgvpaasl lgahprleta hasslshlal ahqqqqqmlq hqsphllgqa
      661 hpsasynqlg lypiiwqypn gthaysglgl psskwvhpet pvnaeaslrr ntpspwlhqp
      721 tpvtsadslg lrshipvrps sadplrplkl tthsspplsk sivehrkeel erkafaeplr
      781 svttapvkse leqsrtqtak eshmhrhyad pmlnqlprpp qetgerlsky keehrrilqe
      841 sievapftak mkalegeren ysrvtslsss pkshsvkyek daersvsely kmkhsvtqnl
      901 pqsnyfttls nsvvnepprs ypskeasgvy vdkqsscpst aaspqalpsy isslskpppl
      961 ikhqpesegs tskipeqlsq svqshsvnsf rsdsrsptql svsssntlrs mpalhrapvf
     1021 hppvhqnlek kessysslsp ptltpvqpvn agggkiqelq kpptlvpepk eaqtvykgts
     1081 eqnlsemwks nnapnnekvd whtermsgks qsatasvivr ppsstkyenv pvmqsaskdr
     1141 vserssavtn ladclktaea retgrvilpn vnsdsartqy ekkfaavsqg sipravtptt
     1201 tiicstktdv tasaamttsv ssrgssevtd svssavscap esaapraagq aaqpqeckvs
     1261 taapvtsaag saaqpasgfs tstdfvhlkk hkaalaaaqf kssnaaetes nsvknqtfst
     1321 slsldsaivc ntinkansvg sgqtsqtsqp nyhtklkkaw ltrhseedkn tnkkdnsgns
     1381 vseiikpctv nliastsndl qnnidskila dkfvkedkhp rrkgkrtyes gsesgdsdes
     1441 eskseqrtkr qpkptykkkq ndlqkkkgdt eeevkpngvl srsakekskl klqsgsnstg
     1501 iprsvlkdwr kvkklkqtge sflqddscse igpnlqkcre crlirskkge epthspvfcr
     1561 fyyfrrlsfs kngvvridgf sspdqyddea lslwthenye ddeldletsk yildiigdkf
     1621 cqlvtsekta mswvkkdaki awkravrgvr emcdaceatl fnihwvcqkc gfvvcldcyk
     1681 akerkssrdk elyawmkcvk gqphdhkhlm ptqiipgsvl tdlldamhni rekfeikshc
     1741 qctikqntqa gklpamngvs qvlqnvlnhs nkislcmpes qqqntpqkse tngntsprsd
     1801 vstdskltpp esqsplhwla dlaeqkaree kkenkecpsg khskegkdqd nlespnckss
     1861 ppasqnneqg stlrdllttt agklrlgstd agiafapvys tgtasgksgr tmpnilddii
     1921 asvvenkipp nktpkinvks eikeepkddk ksiqddcskr ysdiqyswic dkhvlwlrdh
     1981 kntnnwklfk ecwkqgrpvl vsgmhkkmnf slwkaesisl dfgnqqadil nckdsiisnt
     2041 nvkefwdgfe dvskrqkvkn getallklkd wpsgedfkam mparyedllk slplpeycsp
     2101 egklnlashl pgffvrpdlg prlcsaygva atkdhdigtt nlhievsdvv nilvyvgiak
     2161 gngvlsksgv lkkleeedld dllrkrlkds selpgalwhi yagkdadkir eflqkiakeq
     2221 glevlpehdp irdqswyvnk klrqrlfeey gvktctviqf lgdaiilpag alhqvqnfhs
     2281 cvqvtedfvs pehlvqsfhl tqelrlskee inyddklqvk nilyhavkem vralkihege
     2341 medmden
//
LOCUS       XP_041329159            2314 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041329159
VERSION     XP_041329159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2314
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X3"
                     /calculated_mol_wt=258926
     Region          <895..1037
                     /region_name="KLF1_2_4_N"
                     /note="N-terminal domain of Kruppel-like factor (KLF) 1,
                     KLF2, KLF4, and similar proteins; cl41729"
                     /db_xref="CDD:425360"
     Region          1051..>1321
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2052..2124
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2156..2255
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2314
                     /gene="JMJD1C"
                     /coded_by="XM_041473225.1:193..7137"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mavetrpelv gkrflclgge eppesgrwra gviravsqrd shspdlavyv efddlewekr
       61 ewvkvyedfa aflveyqlvw akrkdpsqtq gskikqiqwp altfkplvgk svynsitave
      121 flvdkqldfi tedsafqpyq ddvdslnpvl rdnpqlheev kawvkeqkvq eifmqgpysl
      181 ngyrvrvyrq dsatqwftgi ithhdlftrt mvvmndqvle pqnvdpsmvq mtflddvvhs
      241 llkgenigit srrrsrsnqn sntvhghytr aqansprpam nsqaaaprqn shqqqrntrp
      301 nkrkgsdssm pdeekmkder ydyigrgenp ktknkhflsk rrkpeedekk lnvkrlrtdn
      361 isdysessds eisskrltds sseqnsenel ksknssking eegksqtteg veqtltdrqs
      421 pwdevqqdkn heeterlkss vldhqekssl haaeqptlye qnakdppvqd cnsekhhtve
      481 lkneqflprp ptpkcvvdvs nknssekenq dnaastfglq tvqkieshss dlkqqfanan
      541 flearkqead qswvssvgkt dliqpgvvkt lpvnehlnse kvqygsfmss lnvaslaees
      601 klrkqspvpd svkskssasv dhpktkspdv kpkftqssdt vkskypngth aysglglpss
      661 kwvhpetpvn aeaslrrntp spwlhqptpv tsadslglrs hipvrpssad plrplkltth
      721 sspplsksiv ehrkeelerk afaeplrsvt tapvkseleq srtqtakesh mhrhyadpml
      781 nqlprppqet gerlskykee hrrilqesie vapftakmka legerenysr vtslssspks
      841 hsvkyekdae rsvselykmk hsvtqnlpqs nyfttlsnsv vnepprsyps keasgvyvdk
      901 qsscpstaas pqalpsyiss lskppplikh qpesegstsk ipeqlsqsvq shsvnsfrsd
      961 srsptqlsvs ssntlrsmpa lhrapvfhpp vhqnlekkes sysslspptl tpvqpvnagg
     1021 gkiqelqkpp tlvpepkeaq tvykgtseqn lsemwksnna pnnekvdwht ermsgksqsa
     1081 tasvivrpps stkyenvpvm qsaskdrvse rssavtnlad clktaearet grvilpnvns
     1141 dsartqyekk faavsqgsip ravtptttii cstktdvtas aamttsvssr gssevtdsvs
     1201 savscapesa apraagqaaq pqeckvstaa pvtsaagsaa qpasgfstst dfvhlkkhka
     1261 alaaaqfkss naaetesnsv knqtfstsls ldsaivcnti nkansvgsgq tsqtsqpnyh
     1321 tklkkawltr hseedkntnk kdnsgnsvse iikpctvnli astsndlqnn idskiladkf
     1381 vkedkhprrk gkrtyesgse sgdsdesesk seqrtkrqpk ptykkkqndl qkkkgdteee
     1441 vkpngvlsrs akeksklklq sgsnstgipr svlkdwrkvk klkqtgesfl qddscseigp
     1501 nlqkcrecrl irskkgeept hspvfcrfyy frrlsfskng vvridgfssp dqyddealsl
     1561 wthenyedde ldletskyil diigdkfcql vtsektamsw vkkdakiawk ravrgvremc
     1621 daceatlfni hwvcqkcgfv vcldcykake rkssrdkely awmkcvkgqp hdhkhlmptq
     1681 iipgsvltdl ldamhnirek feikshcqct ikqntqagkl pamngvsqvl qnvlnhsnki
     1741 slcmpesqqq ntpqksetng ntsprsdvst dskltppesq splhwladla eqkareekke
     1801 nkecpsgkhs kegkdqdnle spnckssppa sqnneqgstl rdlltttagk lrlgstdagi
     1861 afapvystgt asgksgrtmp nilddiiasv venkippnkt pkinvkseik eepkddkksi
     1921 qddcskrysd iqyswicdkh vlwlrdhknt nnwklfkecw kqgrpvlvsg mhkkmnfslw
     1981 kaesisldfg nqqadilnck dsiisntnvk efwdgfedvs krqkvknget allklkdwps
     2041 gedfkammpa ryedllkslp lpeycspegk lnlashlpgf fvrpdlgprl csaygvaatk
     2101 dhdigttnlh ievsdvvnil vyvgiakgng vlsksgvlkk leeedlddll rkrlkdssel
     2161 pgalwhiyag kdadkirefl qkiakeqgle vlpehdpird qswyvnkklr qrlfeeygvk
     2221 tctviqflgd aiilpagalh qvqnfhscvq vtedfvspeh lvqsfhltqe lrlskeeiny
     2281 ddklqvknil yhavkemvra lkihegemed mden
//
LOCUS       XP_041329165            2310 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041329165
VERSION     XP_041329165.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473231.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2310
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X4"
                     /calculated_mol_wt=256636
     Region          1047..>1317
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2048..2120
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2152..2251
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2310
                     /gene="JMJD1C"
                     /coded_by="XM_041473231.1:315..7247"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mvvmndqvle pqnvdpsmvq mtflddvvhs llkgenigit srrrsrsnqn sntvhghytr
       61 aqansprpam nsqaaaprqn shqqqrntrp nkrkgsdssm pdeekmkder ydyigrgenp
      121 ktknkhflsk rrkpeedekk lnvkrlrtdn isdysessds eisskrltds sseqnsenel
      181 ksknssking eegksqtteg veqtltdrqs pwdevqqdkn heeterlkss vldhqekssl
      241 haaeqptlye qnakdppvqd cnsekhhtve lkneqflprp ptpkcvvdvs nknssekenq
      301 dnaastfglq tvqkieshss dlkqqfanan flearkqead qswvssvgkt dliqpgvvkt
      361 lpvnehlnse kvqygsfmss lnvaslaees klrkqspvpd svkskssasv dhpktkspdv
      421 kpkftqssdt vkskvssqns hatgltrsan ktdhdlprss fhpvparvsa leatksplii
      481 dknehftvyr dptligqetg tnhispylhq hnyplhsssh rtclnpnahh paltgsshll
      541 agssaqapls ainthplssa shhsvhhphl lpavlpgvpa asllgahprl etahasslsh
      601 lalahqqqqq mlqhqsphll gqahpsasyn qlglypiiwq ypngthaysg lglpsskwvh
      661 petpvnaeas lrrntpspwl hqptpvtsad slglrshipv rpssadplrp lkltthsspp
      721 lsksivehrk eelerkafae plrsvttapv kseleqsrtq takeshmhrh yadpmlnqlp
      781 rppqetgerl skykeehrri lqesievapf takmkalege renysrvtsl ssspkshsvk
      841 yekdaersvs elykmkhsvt qnlpqsnyft tlsnsvvnep prsypskeas gvyvdkqssc
      901 pstaaspqal psyisslskp pplikhqpes egstskipeq lsqsvqshsv nsfrsdsrsp
      961 tqlsvsssnt lrsmpalhra pvfhppvhqn lekkessyss lspptltpvq pvnagggkiq
     1021 elqkpptlvp epkeaqtvyk gtseqnlsem wksnnapnne kvdwhterms gksqsatasv
     1081 ivrppsstky envpvmqsas kdrvserssa vtnladclkt aearetgrvi lpnvnsdsar
     1141 tqyekkfaav sqgsipravt ptttiicstk tdvtasaamt tsvssrgsse vtdsvssavs
     1201 capesaapra agqaaqpqec kvstaapvts aagsaaqpas gfststdfvh lkkhkaalaa
     1261 aqfkssnaae tesnsvknqt fstslsldsa ivcntinkan svgsgqtsqt sqpnyhtklk
     1321 kawltrhsee dkntnkkdns gnsvseiikp ctvnliasts ndlqnnidsk iladkfvked
     1381 khprrkgkrt yesgsesgds deseskseqr tkrqpkptyk kkqndlqkkk gdteeevkpn
     1441 gvlsrsakek sklklqsgsn stgiprsvlk dwrkvkklkq tgesflqdds cseigpnlqk
     1501 crecrlirsk kgeepthspv fcrfyyfrrl sfskngvvri dgfsspdqyd dealslwthe
     1561 nyeddeldle tskyildiig dkfcqlvtse ktamswvkkd akiawkravr gvremcdace
     1621 atlfnihwvc qkcgfvvcld cykakerkss rdkelyawmk cvkgqphdhk hlmptqiipg
     1681 svltdlldam hnirekfeik shcqctikqn tqagklpamn gvsqvlqnvl nhsnkislcm
     1741 pesqqqntpq ksetngntsp rsdvstdskl tppesqsplh wladlaeqka reekkenkec
     1801 psgkhskegk dqdnlespnc kssppasqnn eqgstlrdll tttagklrlg stdagiafap
     1861 vystgtasgk sgrtmpnild diiasvvenk ippnktpkin vkseikeepk ddkksiqddc
     1921 skrysdiqys wicdkhvlwl rdhkntnnwk lfkecwkqgr pvlvsgmhkk mnfslwkaes
     1981 isldfgnqqa dilnckdsii sntnvkefwd gfedvskrqk vkngetallk lkdwpsgedf
     2041 kammparyed llkslplpey cspegklnla shlpgffvrp dlgprlcsay gvaatkdhdi
     2101 gttnlhievs dvvnilvyvg iakgngvlsk sgvlkkleee dlddllrkrl kdsselpgal
     2161 whiyagkdad kireflqkia keqglevlpe hdpirdqswy vnkklrqrlf eeygvktctv
     2221 iqflgdaiil pagalhqvqn fhscvqvted fvspehlvqs fhltqelrls keeinyddkl
     2281 qvknilyhav kemvralkih egemedmden
//
LOCUS       XP_041329173            2310 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041329173
VERSION     XP_041329173.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473239.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2310
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X4"
                     /calculated_mol_wt=256636
     Region          1047..>1317
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2048..2120
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2152..2251
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2310
                     /gene="JMJD1C"
                     /coded_by="XM_041473239.1:538..7470"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mvvmndqvle pqnvdpsmvq mtflddvvhs llkgenigit srrrsrsnqn sntvhghytr
       61 aqansprpam nsqaaaprqn shqqqrntrp nkrkgsdssm pdeekmkder ydyigrgenp
      121 ktknkhflsk rrkpeedekk lnvkrlrtdn isdysessds eisskrltds sseqnsenel
      181 ksknssking eegksqtteg veqtltdrqs pwdevqqdkn heeterlkss vldhqekssl
      241 haaeqptlye qnakdppvqd cnsekhhtve lkneqflprp ptpkcvvdvs nknssekenq
      301 dnaastfglq tvqkieshss dlkqqfanan flearkqead qswvssvgkt dliqpgvvkt
      361 lpvnehlnse kvqygsfmss lnvaslaees klrkqspvpd svkskssasv dhpktkspdv
      421 kpkftqssdt vkskvssqns hatgltrsan ktdhdlprss fhpvparvsa leatksplii
      481 dknehftvyr dptligqetg tnhispylhq hnyplhsssh rtclnpnahh paltgsshll
      541 agssaqapls ainthplssa shhsvhhphl lpavlpgvpa asllgahprl etahasslsh
      601 lalahqqqqq mlqhqsphll gqahpsasyn qlglypiiwq ypngthaysg lglpsskwvh
      661 petpvnaeas lrrntpspwl hqptpvtsad slglrshipv rpssadplrp lkltthsspp
      721 lsksivehrk eelerkafae plrsvttapv kseleqsrtq takeshmhrh yadpmlnqlp
      781 rppqetgerl skykeehrri lqesievapf takmkalege renysrvtsl ssspkshsvk
      841 yekdaersvs elykmkhsvt qnlpqsnyft tlsnsvvnep prsypskeas gvyvdkqssc
      901 pstaaspqal psyisslskp pplikhqpes egstskipeq lsqsvqshsv nsfrsdsrsp
      961 tqlsvsssnt lrsmpalhra pvfhppvhqn lekkessyss lspptltpvq pvnagggkiq
     1021 elqkpptlvp epkeaqtvyk gtseqnlsem wksnnapnne kvdwhterms gksqsatasv
     1081 ivrppsstky envpvmqsas kdrvserssa vtnladclkt aearetgrvi lpnvnsdsar
     1141 tqyekkfaav sqgsipravt ptttiicstk tdvtasaamt tsvssrgsse vtdsvssavs
     1201 capesaapra agqaaqpqec kvstaapvts aagsaaqpas gfststdfvh lkkhkaalaa
     1261 aqfkssnaae tesnsvknqt fstslsldsa ivcntinkan svgsgqtsqt sqpnyhtklk
     1321 kawltrhsee dkntnkkdns gnsvseiikp ctvnliasts ndlqnnidsk iladkfvked
     1381 khprrkgkrt yesgsesgds deseskseqr tkrqpkptyk kkqndlqkkk gdteeevkpn
     1441 gvlsrsakek sklklqsgsn stgiprsvlk dwrkvkklkq tgesflqdds cseigpnlqk
     1501 crecrlirsk kgeepthspv fcrfyyfrrl sfskngvvri dgfsspdqyd dealslwthe
     1561 nyeddeldle tskyildiig dkfcqlvtse ktamswvkkd akiawkravr gvremcdace
     1621 atlfnihwvc qkcgfvvcld cykakerkss rdkelyawmk cvkgqphdhk hlmptqiipg
     1681 svltdlldam hnirekfeik shcqctikqn tqagklpamn gvsqvlqnvl nhsnkislcm
     1741 pesqqqntpq ksetngntsp rsdvstdskl tppesqsplh wladlaeqka reekkenkec
     1801 psgkhskegk dqdnlespnc kssppasqnn eqgstlrdll tttagklrlg stdagiafap
     1861 vystgtasgk sgrtmpnild diiasvvenk ippnktpkin vkseikeepk ddkksiqddc
     1921 skrysdiqys wicdkhvlwl rdhkntnnwk lfkecwkqgr pvlvsgmhkk mnfslwkaes
     1981 isldfgnqqa dilnckdsii sntnvkefwd gfedvskrqk vkngetallk lkdwpsgedf
     2041 kammparyed llkslplpey cspegklnla shlpgffvrp dlgprlcsay gvaatkdhdi
     2101 gttnlhievs dvvnilvyvg iakgngvlsk sgvlkkleee dlddllrkrl kdsselpgal
     2161 whiyagkdad kireflqkia keqglevlpe hdpirdqswy vnkklrqrlf eeygvktctv
     2221 iqflgdaiil pagalhqvqn fhscvqvted fvspehlvqs fhltqelrls keeinyddkl
     2281 qvknilyhav kemvralkih egemedmden
//
LOCUS       XP_041329182            2310 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041329182
VERSION     XP_041329182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2310
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X4"
                     /calculated_mol_wt=256636
     Region          1047..>1317
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2048..2120
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2152..2251
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2310
                     /gene="JMJD1C"
                     /coded_by="XM_041473248.1:238..7170"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mvvmndqvle pqnvdpsmvq mtflddvvhs llkgenigit srrrsrsnqn sntvhghytr
       61 aqansprpam nsqaaaprqn shqqqrntrp nkrkgsdssm pdeekmkder ydyigrgenp
      121 ktknkhflsk rrkpeedekk lnvkrlrtdn isdysessds eisskrltds sseqnsenel
      181 ksknssking eegksqtteg veqtltdrqs pwdevqqdkn heeterlkss vldhqekssl
      241 haaeqptlye qnakdppvqd cnsekhhtve lkneqflprp ptpkcvvdvs nknssekenq
      301 dnaastfglq tvqkieshss dlkqqfanan flearkqead qswvssvgkt dliqpgvvkt
      361 lpvnehlnse kvqygsfmss lnvaslaees klrkqspvpd svkskssasv dhpktkspdv
      421 kpkftqssdt vkskvssqns hatgltrsan ktdhdlprss fhpvparvsa leatksplii
      481 dknehftvyr dptligqetg tnhispylhq hnyplhsssh rtclnpnahh paltgsshll
      541 agssaqapls ainthplssa shhsvhhphl lpavlpgvpa asllgahprl etahasslsh
      601 lalahqqqqq mlqhqsphll gqahpsasyn qlglypiiwq ypngthaysg lglpsskwvh
      661 petpvnaeas lrrntpspwl hqptpvtsad slglrshipv rpssadplrp lkltthsspp
      721 lsksivehrk eelerkafae plrsvttapv kseleqsrtq takeshmhrh yadpmlnqlp
      781 rppqetgerl skykeehrri lqesievapf takmkalege renysrvtsl ssspkshsvk
      841 yekdaersvs elykmkhsvt qnlpqsnyft tlsnsvvnep prsypskeas gvyvdkqssc
      901 pstaaspqal psyisslskp pplikhqpes egstskipeq lsqsvqshsv nsfrsdsrsp
      961 tqlsvsssnt lrsmpalhra pvfhppvhqn lekkessyss lspptltpvq pvnagggkiq
     1021 elqkpptlvp epkeaqtvyk gtseqnlsem wksnnapnne kvdwhterms gksqsatasv
     1081 ivrppsstky envpvmqsas kdrvserssa vtnladclkt aearetgrvi lpnvnsdsar
     1141 tqyekkfaav sqgsipravt ptttiicstk tdvtasaamt tsvssrgsse vtdsvssavs
     1201 capesaapra agqaaqpqec kvstaapvts aagsaaqpas gfststdfvh lkkhkaalaa
     1261 aqfkssnaae tesnsvknqt fstslsldsa ivcntinkan svgsgqtsqt sqpnyhtklk
     1321 kawltrhsee dkntnkkdns gnsvseiikp ctvnliasts ndlqnnidsk iladkfvked
     1381 khprrkgkrt yesgsesgds deseskseqr tkrqpkptyk kkqndlqkkk gdteeevkpn
     1441 gvlsrsakek sklklqsgsn stgiprsvlk dwrkvkklkq tgesflqdds cseigpnlqk
     1501 crecrlirsk kgeepthspv fcrfyyfrrl sfskngvvri dgfsspdqyd dealslwthe
     1561 nyeddeldle tskyildiig dkfcqlvtse ktamswvkkd akiawkravr gvremcdace
     1621 atlfnihwvc qkcgfvvcld cykakerkss rdkelyawmk cvkgqphdhk hlmptqiipg
     1681 svltdlldam hnirekfeik shcqctikqn tqagklpamn gvsqvlqnvl nhsnkislcm
     1741 pesqqqntpq ksetngntsp rsdvstdskl tppesqsplh wladlaeqka reekkenkec
     1801 psgkhskegk dqdnlespnc kssppasqnn eqgstlrdll tttagklrlg stdagiafap
     1861 vystgtasgk sgrtmpnild diiasvvenk ippnktpkin vkseikeepk ddkksiqddc
     1921 skrysdiqys wicdkhvlwl rdhkntnnwk lfkecwkqgr pvlvsgmhkk mnfslwkaes
     1981 isldfgnqqa dilnckdsii sntnvkefwd gfedvskrqk vkngetallk lkdwpsgedf
     2041 kammparyed llkslplpey cspegklnla shlpgffvrp dlgprlcsay gvaatkdhdi
     2101 gttnlhievs dvvnilvyvg iakgngvlsk sgvlkkleee dlddllrkrl kdsselpgal
     2161 whiyagkdad kireflqkia keqglevlpe hdpirdqswy vnkklrqrlf eeygvktctv
     2221 iqflgdaiil pagalhqvqn fhscvqvted fvspehlvqs fhltqelrls keeinyddkl
     2281 qvknilyhav kemvralkih egemedmden
//
LOCUS       XP_041329190            2347 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329190
VERSION     XP_041329190.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473256.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2347
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X2"
                     /calculated_mol_wt=261035
     Region          1084..>1354
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          2085..2157
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          2189..2288
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     CDS             1..2347
                     /gene="JMJD1C"
                     /coded_by="XM_041473256.1:473..7516"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mqgpyslngy rvrvyrqdsa tqwftgiith hdlftrtmvv mndqvlepqn vdpsmvqmtf
       61 lddvvhsllk genigitsrr rsrsnqnsnt vhghytraqa nsprpamnsq aaaprqnshq
      121 qqrntrpnkr kgsdssmpde ekmkderydy igrgenpktk nkhflskrrk peedekklnv
      181 krlrtdnisd ysessdseis skrltdssse qnsenelksk nsskingeeg ksqttegveq
      241 tltdrqspwd evqqdknhee terlkssvld hqeksslhaa eqptlyeqna kdppvqdcns
      301 ekhhtvelkn eqflprpptp kcvvdvsnkn ssekenqdna astfglqtvq kieshssdlk
      361 qqfananfle arkqeadqsw vssvgktdli qpgvvktlpv nehlnsekvq ygsfmsslnv
      421 aslaeesklr kqspvpdsvk skssasvdhp ktkspdvkpk ftqssdtvks kvssqnshat
      481 gltrsanktd hdlprssfhp vparvsalea tkspliidkn ehftvyrdpt ligqetgtnh
      541 ispylhqhny plhssshrtc lnpnahhpal tgsshllags saqaplsain thplssashh
      601 svhhphllpa vlpgvpaasl lgahprleta hasslshlal ahqqqqqmlq hqsphllgqa
      661 hpsasynqlg lypiiwqypn gthaysglgl psskwvhpet pvnaeaslrr ntpspwlhqp
      721 tpvtsadslg lrshipvrps sadplrplkl tthsspplsk sivehrkeel erkafaeplr
      781 svttapvkse leqsrtqtak eshmhrhyad pmlnqlprpp qetgerlsky keehrrilqe
      841 sievapftak mkalegeren ysrvtslsss pkshsvkyek daersvsely kmkhsvtqnl
      901 pqsnyfttls nsvvnepprs ypskeasgvy vdkqsscpst aaspqalpsy isslskpppl
      961 ikhqpesegs tskipeqlsq svqshsvnsf rsdsrsptql svsssntlrs mpalhrapvf
     1021 hppvhqnlek kessysslsp ptltpvqpvn agggkiqelq kpptlvpepk eaqtvykgts
     1081 eqnlsemwks nnapnnekvd whtermsgks qsatasvivr ppsstkyenv pvmqsaskdr
     1141 vserssavtn ladclktaea retgrvilpn vnsdsartqy ekkfaavsqg sipravtptt
     1201 tiicstktdv tasaamttsv ssrgssevtd svssavscap esaapraagq aaqpqeckvs
     1261 taapvtsaag saaqpasgfs tstdfvhlkk hkaalaaaqf kssnaaetes nsvknqtfst
     1321 slsldsaivc ntinkansvg sgqtsqtsqp nyhtklkkaw ltrhseedkn tnkkdnsgns
     1381 vseiikpctv nliastsndl qnnidskila dkfvkedkhp rrkgkrtyes gsesgdsdes
     1441 eskseqrtkr qpkptykkkq ndlqkkkgdt eeevkpngvl srsakekskl klqsgsnstg
     1501 iprsvlkdwr kvkklkqtge sflqddscse igpnlqkcre crlirskkge epthspvfcr
     1561 fyyfrrlsfs kngvvridgf sspdqyddea lslwthenye ddeldletsk yildiigdkf
     1621 cqlvtsekta mswvkkdaki awkravrgvr emcdaceatl fnihwvcqkc gfvvcldcyk
     1681 akerkssrdk elyawmkcvk gqphdhkhlm ptqiipgsvl tdlldamhni rekfeikshc
     1741 qctikqntqa gklpamngvs qvlqnvlnhs nkislcmpes qqqntpqkse tngntsprsd
     1801 vstdskltpp esqsplhwla dlaeqkaree kkenkecpsg khskegkdqd nlespnckss
     1861 ppasqnneqg stlrdllttt agklrlgstd agiafapvys tgtasgksgr tmpnilddii
     1921 asvvenkipp nktpkinvks eikeepkddk ksiqddcskr ysdiqyswic dkhvlwlrdh
     1981 kntnnwklfk ecwkqgrpvl vsgmhkkmnf slwkaesisl dfgnqqadil nckdsiisnt
     2041 nvkefwdgfe dvskrqkvkn getallklkd wpsgedfkam mparyedllk slplpeycsp
     2101 egklnlashl pgffvrpdlg prlcsaygva atkdhdigtt nlhievsdvv nilvyvgiak
     2161 gngvlsksgv lkkleeedld dllrkrlkds selpgalwhi yagkdadkir eflqkiakeq
     2221 glevlpehdp irdqswyvnk klrqrlfeey gvktctviqf lgdaiilpag alhqvqnfhs
     2281 cvqvtedfvs pehlvqsfhl tqelrlskee inyddklqvk nilyhavkem vralkihege
     2341 medmden
//
LOCUS       XP_041329198            2023 aa            linear   VRT 06-MAY-2021
DEFINITION  probable JmjC domain-containing histone demethylation protein 2C
            isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041329198
VERSION     XP_041329198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2023
                     /product="probable JmjC domain-containing histone
                     demethylation protein 2C isoform X5"
                     /calculated_mol_wt=225158
     CDS             1..2023
                     /gene="JMJD1C"
                     /coded_by="XM_041473264.1:196..6267"
                     /db_xref="GeneID:121356573"
ORIGIN      
        1 mavetrpelv gkrflclgge eppesgrwra gviravsqrd shspdlavyv efddlewekr
       61 ewvkvyedfa aflveyqlvw akrkdpsqtq gskikqiqwp altfkplvgk svynsitave
      121 flvdkqldfi tedsafqpyq ddvdslnpvl rdnpqlheev kawvkeqkvq eifmqgpysl
      181 ngyrvrvyrq dsatqwftgi ithhdlftrt mvvmndqvle pqnvdpsmvq mtflddvvhs
      241 llkgenigit srrrsrsnqn sntvhghytr aqansprpam nsqaaaprqn shqqqrntrp
      301 nkrkgsdssm pdeekmkder ydyigrgenp ktknkhflsk rrkpeedekk lnvkrlrtdn
      361 isdysessds eisskrltds sseqnsenel ksknssking eegksqtteg veqtltdrqs
      421 pwdevqqdkn heeterlkss vldhqekssl haaeqptlye qnakdppvqd cnsekhhtve
      481 lkneqflprp ptpkcvvdvs nknssekenq dnaastfglq tvqkieshss dlkqqfanan
      541 flearkqead qswvssvgkt dliqpgvvkt lpvnehlnse kvqygsfmss lnvaslaees
      601 klrkqspvpd svkskssasv dhpktkspdv kpkftqssdt vkskvssqns hatgltrsan
      661 ktdhdlprss fhpvparvsa leatksplii dknehftvyr dptligqetg tnhispylhq
      721 hnyplhsssh rtclnpnahh paltgsshll agssaqapls ainthplssa shhsvhhphl
      781 lpavlpgvpa asllgahprl etahasslsh lalahqqqqq mlqhqsphll gqahpsasyn
      841 qlglypiiwq ypngthaysg lglpsskwvh petpvnaeas lrrntpspwl hqptpvtsad
      901 slglrshipv rpssadplrp lkltthsspp lsksivehrk eelerkafae plrsvttapv
      961 kseleqsrtq takeshmhrh yadpmlnqlp rppqetgerl skykeehrri lqesievapf
     1021 takmkalege renysrvtsl ssspkshsvk yekdaersvs elykmkhsvt qnlpqsnyft
     1081 tlsnsvvnep prsypskeas gvyvdkqssc pstaaspqal psyisslskp pplikhqpes
     1141 egstskipeq lsqsvqshsv nsfrsdsrsp tqlsvsssnt lrsmpalhra pvfhppvhqn
     1201 lekkessyss lspptltpvq pvnagggkiq elqkpptlvp epkeaqtvyk gtseqnlsem
     1261 wksnnapnne kvdwhterms gksqsatasv ivrppsstky envpvmqsas kdrvserssa
     1321 vtnladclkt aearetgrvi lpnvnsdsar tqyekkfaav sqgsipravt ptttiicstk
     1381 tdvtasaamt tsvssrgsse vtdsvssavs capesaapra agqaaqpqec kvstaapvts
     1441 aagsaaqpas gfststdfvh lkkhkaalaa aqfkssnaae tesnsvknqt fstslsldsa
     1501 ivcntinkan svgsgqtsqt sqpnyhtklk kawltrhsee dkntnkkdns gnsvseiikp
     1561 ctvnliasts ndlqnnidsk iladkfvked khprrkgkrt yesgsesgds deseskseqr
     1621 tkrqpkptyk kkqndlqkkk gdteeevkpn gvlsrsakek sklklqsgsn stgiprsvlk
     1681 dwrkvkklkq tgesflqdds cseigpnlqk crecrlirsk kgeepthspv fcrfyyfrrl
     1741 sfskngvvri dgfsspdqyd dealslwthe nyeddeldle tskyildiig dkfcqlvtse
     1801 ktamswvkkd akiawkravr gvremcdace atlfnihwvc qkcgfvvcld cykakerkss
     1861 rdkelyawmk cvkgqphdhk hlmptqiipg svltdlldam hnirekfeik shcqctikqn
     1921 tqagklpamn gvsqvlqnvl nhsnkislcm pesqqqntpq ksetngntsp rsdvstdskl
     1981 tppesqsplh wladlaeqka reekkreqrm sfwktfegre gpg
//
LOCUS       XP_041329218            1012 aa            linear   VRT 06-MAY-2021
DEFINITION  multimerin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329218
VERSION     XP_041329218.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473284.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1012
                     /product="multimerin-2 isoform X1"
                     /calculated_mol_wt=116218
     Region          92..162
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          268..>729
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          888..1009
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..1012
                     /gene="MMRN2"
                     /coded_by="XM_041473284.1:374..3412"
                     /db_xref="GeneID:121356624"
ORIGIN      
        1 mlvklllvcs tvglaklveh adhhgdhhss lhslrvhets ahpqrtplpr hegyweaegl
       61 redtqdypss visshqeerg dleaassrpr ngnwcsftqs rlvtyieacm kekyivnsqq
      121 pcpngapdcq kimyrtalkp vyqvkqktlk slqwkccpgf tgkdceqrdp nfilvpgtet
      181 egqeeefsnh mstsvdsrem fqviqnheal lddlqsdihq aastlgdlqr lfenngtsmv
      241 lavnesnsdh qerllqqvlf phvenflrkh fnpvwasfnk slqnlsnvvr nlshdveank
      301 ksierfqest vpkkefqelg tkfeskvqen ivkvdqakrd ienkvhmqqa nihynlsmik
      361 adtdtrlkkl hkiqqshfla lnnsianmkq eqnllenkle alkknltels lhhgpkdens
      421 qltikhmnei lsghakqlke lymesdvafq niavlerwfk elkkniskyr pedltitlae
      481 ksvimeenda amerqiseln ytlsnlqeny sdllrymeec ncqrvstdtd vleedprnst
      541 ysledtqskd mkhlesvfrd ffkseieels saipsihlsl nlrqeenrql qsqvtafsed
      601 mgllkrkdee ihrhikhlns sfssllkdam rheealeall rhefldvffe ddfsslipsv
      661 fqlqeslrhf sdklqeqnmt leslrrrfhp lershqnnhd ahlppkhpee etqtsstlhe
      721 vssqrsvieh mepnyeaakd dslestaynd imtlkndikh lslaikrhes rgdlslccnh
      781 tianviepln vsveilsadl atikrnleeh lvtfkklfgs neelgasnis ldvtkiqsml
      841 qkkgrrqqkg qdkqrdkkrs enhrentqti sgrntvqtef vekdslvafh vgfserkdke
      901 ktvrfnetyl nygnsyfseh ghfkaphkgv ylfvisaefs sgpalgqlsf srgykrtlss
      961 sqrktphgnt mttfaiaeme kgetvcfell qgsvvkrspp gttmggflis kt
//
LOCUS       XP_041329226            1012 aa            linear   VRT 06-MAY-2021
DEFINITION  multimerin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329226
VERSION     XP_041329226.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473292.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1012
                     /product="multimerin-2 isoform X1"
                     /calculated_mol_wt=116218
     Region          92..162
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          268..>729
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          888..1009
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..1012
                     /gene="MMRN2"
                     /coded_by="XM_041473292.1:202..3240"
                     /db_xref="GeneID:121356624"
ORIGIN      
        1 mlvklllvcs tvglaklveh adhhgdhhss lhslrvhets ahpqrtplpr hegyweaegl
       61 redtqdypss visshqeerg dleaassrpr ngnwcsftqs rlvtyieacm kekyivnsqq
      121 pcpngapdcq kimyrtalkp vyqvkqktlk slqwkccpgf tgkdceqrdp nfilvpgtet
      181 egqeeefsnh mstsvdsrem fqviqnheal lddlqsdihq aastlgdlqr lfenngtsmv
      241 lavnesnsdh qerllqqvlf phvenflrkh fnpvwasfnk slqnlsnvvr nlshdveank
      301 ksierfqest vpkkefqelg tkfeskvqen ivkvdqakrd ienkvhmqqa nihynlsmik
      361 adtdtrlkkl hkiqqshfla lnnsianmkq eqnllenkle alkknltels lhhgpkdens
      421 qltikhmnei lsghakqlke lymesdvafq niavlerwfk elkkniskyr pedltitlae
      481 ksvimeenda amerqiseln ytlsnlqeny sdllrymeec ncqrvstdtd vleedprnst
      541 ysledtqskd mkhlesvfrd ffkseieels saipsihlsl nlrqeenrql qsqvtafsed
      601 mgllkrkdee ihrhikhlns sfssllkdam rheealeall rhefldvffe ddfsslipsv
      661 fqlqeslrhf sdklqeqnmt leslrrrfhp lershqnnhd ahlppkhpee etqtsstlhe
      721 vssqrsvieh mepnyeaakd dslestaynd imtlkndikh lslaikrhes rgdlslccnh
      781 tianviepln vsveilsadl atikrnleeh lvtfkklfgs neelgasnis ldvtkiqsml
      841 qkkgrrqqkg qdkqrdkkrs enhrentqti sgrntvqtef vekdslvafh vgfserkdke
      901 ktvrfnetyl nygnsyfseh ghfkaphkgv ylfvisaefs sgpalgqlsf srgykrtlss
      961 sqrktphgnt mttfaiaeme kgetvcfell qgsvvkrspp gttmggflis kt
//
LOCUS       XP_041329234             954 aa            linear   VRT 06-MAY-2021
DEFINITION  multimerin-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329234
VERSION     XP_041329234.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473300.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..954
                     /product="multimerin-2 isoform X2"
                     /calculated_mol_wt=109826
     Region          92..162
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          210..>671
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          830..951
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..954
                     /gene="MMRN2"
                     /coded_by="XM_041473300.1:374..3238"
                     /db_xref="GeneID:121356624"
ORIGIN      
        1 mlvklllvcs tvglaklveh adhhgdhhss lhslrvhets ahpqrtplpr hegyweaegl
       61 redtqdypss visshqeerg dleaassrpr ngnwcsftqs rlvtyieacm kekyivnsqq
      121 pcpngapdcq kimyrtalkp vyqvkqktlk slqwkccpgf tgkdceqrdp nfilvpgtet
      181 egqeeefsnh nhqerllqqv lfphvenflr khfnpvwasf nkslqnlsnv vrnlshdvea
      241 nkksierfqe stvpkkefqe lgtkfeskvq enivkvdqak rdienkvhmq qanihynlsm
      301 ikadtdtrlk klhkiqqshf lalnnsianm kqeqnllenk lealkknlte lslhhgpkde
      361 nsqltikhmn eilsghakql kelymesdva fqniavlerw fkelkknisk yrpedltitl
      421 aeksvimeen daamerqise lnytlsnlqe nysdllryme ecncqrvstd tdvleedprn
      481 stysledtqs kdmkhlesvf rdffkseiee lssaipsihl slnlrqeenr qlqsqvtafs
      541 edmgllkrkd eeihrhikhl nssfssllkd amrheealea llrhefldvf feddfsslip
      601 svfqlqeslr hfsdklqeqn mtleslrrrf hplershqnn hdahlppkhp eeetqtsstl
      661 hevssqrsvi ehmepnyeaa kddslestay ndimtlkndi khlslaikrh esrgdlslcc
      721 nhtianviep lnvsveilsa dlatikrnle ehlvtfkklf gsneelgasn isldvtkiqs
      781 mlqkkgrrqq kgqdkqrdkk rsenhrentq tisgrntvqt efvekdslva fhvgfserkd
      841 kektvrfnet ylnygnsyfs ehghfkaphk gvylfvisae fssgpalgql sfsrgykrtl
      901 sssqrktphg ntmttfaiae mekgetvcfe llqgsvvkrs ppgttmggfl iskt
//
LOCUS       XP_041329243             932 aa            linear   VRT 06-MAY-2021
DEFINITION  multimerin-2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041329243
VERSION     XP_041329243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..932
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..932
                     /product="multimerin-2 isoform X3"
                     /calculated_mol_wt=107355
     Region          92..162
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          188..>649
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          808..929
                     /region_name="C1q"
                     /note="C1q domain; cl23878"
                     /db_xref="CDD:420072"
     CDS             1..932
                     /gene="MMRN2"
                     /coded_by="XM_041473309.1:374..3172"
                     /db_xref="GeneID:121356624"
ORIGIN      
        1 mlvklllvcs tvglaklveh adhhgdhhss lhslrvhets ahpqrtplpr hegyweaegl
       61 redtqdypss visshqeerg dleaassrpr ngnwcsftqs rlvtyieacm kekyivnsqq
      121 pcpngapdcq kimyrtalkp vyqvkqktlk slqwkccpgf tgkdceqrdh qerllqqvlf
      181 phvenflrkh fnpvwasfnk slqnlsnvvr nlshdveank ksierfqest vpkkefqelg
      241 tkfeskvqen ivkvdqakrd ienkvhmqqa nihynlsmik adtdtrlkkl hkiqqshfla
      301 lnnsianmkq eqnllenkle alkknltels lhhgpkdens qltikhmnei lsghakqlke
      361 lymesdvafq niavlerwfk elkkniskyr pedltitlae ksvimeenda amerqiseln
      421 ytlsnlqeny sdllrymeec ncqrvstdtd vleedprnst ysledtqskd mkhlesvfrd
      481 ffkseieels saipsihlsl nlrqeenrql qsqvtafsed mgllkrkdee ihrhikhlns
      541 sfssllkdam rheealeall rhefldvffe ddfsslipsv fqlqeslrhf sdklqeqnmt
      601 leslrrrfhp lershqnnhd ahlppkhpee etqtsstlhe vssqrsvieh mepnyeaakd
      661 dslestaynd imtlkndikh lslaikrhes rgdlslccnh tianviepln vsveilsadl
      721 atikrnleeh lvtfkklfgs neelgasnis ldvtkiqsml qkkgrrqqkg qdkqrdkkrs
      781 enhrentqti sgrntvqtef vekdslvafh vgfserkdke ktvrfnetyl nygnsyfseh
      841 ghfkaphkgv ylfvisaefs sgpalgqlsf srgykrtlss sqrktphgnt mttfaiaeme
      901 kgetvcfell qgsvvkrspp gttmggflis kt
//
LOCUS       XP_041329256             533 aa            linear   VRT 06-MAY-2021
DEFINITION  bone morphogenetic protein receptor type-1A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329256
VERSION     XP_041329256.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473322.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..533
                     /product="bone morphogenetic protein receptor type-1A"
                     /calculated_mol_wt=60098
     Region          57..140
                     /region_name="TFP_LU_ECD_BMPR1A"
                     /note="extracellular domain (ECD) found in bone
                     morphogenetic protein receptor type-1A (BMPR-1A) and
                     similar proteins; cd23612"
                     /db_xref="CDD:467132"
     Region          206..233
                     /region_name="TGF_beta_GS"
                     /note="Transforming growth factor beta type I GS-motif;
                     pfam08515"
                     /db_xref="CDD:462503"
     Region          239..525
                     /region_name="STKc_BMPR1a"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Bone Morphogenetic Protein Type IA Receptor; cd14220"
                     /db_xref="CDD:271122"
     Site            order(241..245,249,260,262,290,310..313,317,319,363,365,
                     367..368,370,381,384,404..407)
                     /site_type="active"
                     /db_xref="CDD:271122"
     Site            order(241..247,249,260,262,310..311,313,317,367..368,370,
                     381)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271122"
     Site            order(245,317,319,363,365,367,384,404..407)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271122"
     Site            order(272..273,276..277,280,295,297)
                     /site_type="other"
                     /note="FKBP12 binding site [polypeptide binding]"
                     /db_xref="CDD:271122"
     Site            380..407
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271122"
     CDS             1..533
                     /gene="BMPR1A"
                     /coded_by="XM_041473322.1:1316..2917"
                     /db_xref="GeneID:121356647"
ORIGIN      
        1 mtrlrvheql lgaylliilh vqgqkpdsml hgtgmktnsd qkkqangvtl apedtlpflk
       61 cycsghcpdd ainntcitng hcfaiieede hgeptlasgc mkyegsdfqc kdspkaqlrr
      121 tieccrtdfc nqdlqptlpp ldstdglfdg sirwmavlis mavciivmvi llscfcykhy
      181 cksmakrhcy nrdleqdeaf ipageslkdl idqsqssgsg sglpllvqrt iakqiqmvrq
      241 vgkgrygevw mgkwrgekva vkvfftteea swfreteiyq tvlmrhenil gfiaadikgt
      301 gswtqlylit dyhengslyd flkcttldnr allklaysaa cglchlhtei ygtqgkpaia
      361 hrdlksknil ikkngtccia dlglavkfns dtnevdvpln trvgtkryma pevldeslnk
      421 nhfqpyimad iysfgliiwe marrcvtggi veeyqlpyyd mvpndpsyed mrevvcvkrl
      481 rpvvsnrwns declrailkl msecwahnpa srltalrikk tlakmvesqd vki
//
LOCUS       XP_041329270             132 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-synuclein [Pyrgilauda ruficollis].
ACCESSION   XP_041329270
VERSION     XP_041329270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="gamma-synuclein"
                     /calculated_mol_wt=13339
     Region          1..>108
                     /region_name="Synuclein"
                     /note="pfam01387"
                     /db_xref="CDD:460186"
     CDS             1..132
                     /gene="SNCG"
                     /coded_by="XM_041473336.1:207..605"
                     /db_xref="GeneID:121356654"
ORIGIN      
        1 mdvfkkgfsi akegvvaaae ktkqgvteaa ektkegvmyv gtktkegvvq svtsvaektk
       61 eqanvvgeav vasvntvank tvegaetiva ttgvvkkedl aapqppeqpr legegapasp
      121 agegeiegdp ss
//
LOCUS       XP_041329288             609 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329288
VERSION     XP_041329288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="bifunctional 3'-phosphoadenosine
                     5'-phosphosulfate synthase 2 isoform X1"
                     /calculated_mol_wt=68106
     Region          17..211
                     /region_name="CysC"
                     /note="Adenylylsulfate kinase or related kinase [Inorganic
                     ion transport and metabolism]; COG0529"
                     /db_xref="CDD:440295"
     Region          238..601
                     /region_name="ATPS"
                     /note="ATP-sulfurylase; cd00517"
                     /db_xref="CDD:173895"
     Site            order(402..406,412,415,479,504..506,508..509,545..547)
                     /site_type="active"
                     /db_xref="CDD:173895"
     Site            409..412
                     /site_type="other"
                     /note="HXXH motif"
                     /db_xref="CDD:173895"
     Site            440..450
                     /site_type="other"
                     /note="flexible loop"
                     /db_xref="CDD:173895"
     CDS             1..609
                     /gene="PAPSS2"
                     /coded_by="XM_041473354.1:83..1912"
                     /db_xref="GeneID:121356670"
ORIGIN      
        1 mssrertgst nvvyqahhvs rskrgqvvgt rggfrgctvw ltglsgagkt tigfaleeyl
       61 vahgipcysl dgdnvrhgln knlgfsaqdr eenirriaev arlfadaglv citsfispft
      121 kdrlnarkih eaaglpffei fvdaplnice srdvkglykk arageikgft gidseyekpe
      181 apelvlktni asvseciqqv vellqaqniv pqgsvkdvle lfvpedklss vraeaeklpa
      241 leitkldlqw vqvlsegwat pltgfmreae ylqvlhfgtl lndgvvnlsv pivlplsaed
      301 kqrlegsaal alsfqgrrla vlrrpeffah rkeercarvw gtacprhphi qmvmesgdwl
      361 vggdlqvlek ikwndgldqy rltplalkkk fremnadavf afqlrnpvhn ghallmqdtr
      421 rqllergykn pvlllhplgg wtkdddvple wrmkqhaavl eeqvldpkst ivaifpspml
      481 yagptevqwh crarmvagan fyivgrdpag mphpdtkqdl yepthggkvl gmapgltsve
      541 iipfrvaayn kvkramdfyd psrhddfdfi sgtrmrklar egenppdgfm apkawkvltt
      601 yyqslekkn
//
LOCUS       XP_041329296             603 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329296
VERSION     XP_041329296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..603
                     /product="bifunctional 3'-phosphoadenosine
                     5'-phosphosulfate synthase 2 isoform X2"
                     /calculated_mol_wt=67389
     Region          11..205
                     /region_name="CysC"
                     /note="Adenylylsulfate kinase or related kinase [Inorganic
                     ion transport and metabolism]; COG0529"
                     /db_xref="CDD:440295"
     Region          232..595
                     /region_name="ATPS"
                     /note="ATP-sulfurylase; cd00517"
                     /db_xref="CDD:173895"
     Site            order(396..400,406,409,473,498..500,502..503,539..541)
                     /site_type="active"
                     /db_xref="CDD:173895"
     Site            403..406
                     /site_type="other"
                     /note="HXXH motif"
                     /db_xref="CDD:173895"
     Site            434..444
                     /site_type="other"
                     /note="flexible loop"
                     /db_xref="CDD:173895"
     CDS             1..603
                     /gene="PAPSS2"
                     /coded_by="XM_041473362.1:17..1828"
                     /db_xref="GeneID:121356670"
ORIGIN      
        1 mgstnvvyqa hhvsrskrgq vvgtrggfrg ctvwltglsg agkttigfal eeylvahgip
       61 cysldgdnvr hglnknlgfs aqdreenirr iaevarlfad aglvcitsfi spftkdrlna
      121 rkiheaaglp ffeifvdapl nicesrdvkg lykkaragei kgftgidsey ekpeapelvl
      181 ktniasvsec iqqvvellqa qnivpqgsvk dvlelfvped klssvraeae klpaleitkl
      241 dlqwvqvlse gwatpltgfm reaeylqvlh fgtllndgvv nlsvpivlpl saedkqrleg
      301 saalalsfqg rrlavlrrpe ffahrkeerc arvwgtacpr hphiqmvmes gdwlvggdlq
      361 vlekikwndg ldqyrltpla lkkkfremna davfafqlrn pvhnghallm qdtrrqller
      421 gyknpvlllh plggwtkddd vplewrmkqh aavleeqvld pkstivaifp spmlyagpte
      481 vqwhcrarmv aganfyivgr dpagmphpdt kqdlyepthg gkvlgmapgl tsveiipfrv
      541 aaynkvkram dfydpsrhdd fdfisgtrmr klaregenpp dgfmapkawk vlttyyqsle
      601 kkn
//
LOCUS       XP_041329307             453 aa            linear   VRT 06-MAY-2021
DEFINITION  multiple inositol polyphosphate phosphatase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329307
VERSION     XP_041329307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="multiple inositol polyphosphate phosphatase 1"
                     /calculated_mol_wt=50518
     Region          63..404
                     /region_name="HP_HAP_like"
                     /note="Histidine phosphatase domain found in histidine
                     acid phosphatases and phytases; contains a His residue
                     which is phosphorylated during the reaction; cd07061"
                     /db_xref="CDD:132717"
     Site            order(69..70,73,159,335..336)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132717"
     CDS             1..453
                     /gene="MINPP1"
                     /coded_by="XM_041473373.1:18..1379"
                     /db_xref="GeneID:121356682"
ORIGIN      
        1 maprreacll llllvlppas aglsayfgtk sryeevnphl vsdplslgpg aggslpasct
       61 plqlravlrh gtryptagqi rrlgelharl lrraagaaac paaaalaewp mwyeesldgr
      121 lapqgrrdme qlarrmaarf palfaarrrl alassskhrc lqsgaafrrg lgptldfggd
      181 evevevndsl mrffdhcakf vvlveendta mcqvnafkeg pemkkvlekv asalclpvee
      241 lnadlvqvaf ltcsyelaik nvtspwcslf seedakvley lndlkqywkr gygydinsrs
      301 scilfqdifq hldkaveesk sskpisspli vqvghaetlq pllalmgyfk ddepllanny
      361 arqaqrkfrs grivpyaanl vfvlyhcdhv nasqeeyqvq lllnekllpf lhsnettsty
      421 tdlkdyykdl lenchfkeec elpqvnvtav del
//
LOCUS       XP_041329322             283 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent anion-selective channel protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329322
VERSION     XP_041329322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="voltage-dependent anion-selective channel
                     protein 2"
                     /calculated_mol_wt=30167
     Region          4..282
                     /region_name="Porin3_VDAC"
                     /note="Voltage-dependent anion channel of the outer
                     mitochondrial membrane; cd07306"
                     /db_xref="CDD:132767"
     Site            order(16,20,46,61,84,154,282)
                     /site_type="active"
                     /note="putative determinants of voltage gating [active]"
                     /db_xref="CDD:132767"
     Site            order(27,29,257,259,277)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:132767"
     CDS             1..283
                     /gene="VDAC2"
                     /coded_by="XM_041473388.1:132..983"
                     /db_xref="GeneID:121356693"
ORIGIN      
        1 maippsyvdl gkpardifnk gygfglvkld vktksasgve fttsgssntd tgkvngslet
       61 kykwaeyglt ftekwntdnt lgteiaiedq lakglkltfd ttfspntgkk sgkikstykr
      121 ecinlgcdvd fdfagpavhg savlgyegwl agyqmtfdsa kskltrnnfs vgyktgdfql
      181 htsvndgsef ggsiyqkvsd nletainlsw tsgsnstrfg faakykldst aslsgkvnns
      241 sligvgytqt lrpgvkltls alidgknina gghklglgle lea
//
LOCUS       XP_041329334             600 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329334
VERSION     XP_041329334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="nuclear receptor coactivator 4 isoform X1"
                     /calculated_mol_wt=67752
     Region          15..147
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     Region          194..324
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     CDS             1..600
                     /gene="NCOA4"
                     /coded_by="XM_041473400.1:210..2012"
                     /db_xref="GeneID:121356702"
ORIGIN      
        1 msppqdrnrn scssetlakc lqakkdleta isgivkaeqq ikenwrevka kihshisrql
       61 eclrsrevwl feqvdliqql keealqqqaq qlywylgqfn clihqlehsy snelanqisi
      121 clerlesltl kpeessilnf eadtsylrqa itsfgsiktm qtserentsp wfpgqsyalm
      181 nceqqqmqcg pvsaslagwl lgsrpagvrq apyvpstnle ewvtqkcase psqdlnsskv
      241 cyfeqawgnl kdlenwllhn qqrdvagktd spgrkdstst lnssfstiek veeleslgqe
      301 emdlsdwllt pdtenasias dekwknefkp freecnlndw llkaetctsc rgsqsksvei
      361 enlgnlkcln ehldgkksat tsavnawllq hpqapfkved vckandlcas fsecvcdenc
      421 gkealckwll kkdgkdkngv pvqrdvpdle hektksaass wlspaqqlpg epmsaekady
      481 saeiaepwka llerpltswl akaehkaest eekeswekad ksfkspfldl lapfhlplnv
      541 nswvlasngl enanlppved kwllrkkaqd fglptvcdlf acmklsgdne kwlyrsplqm
//
LOCUS       XP_041329342             600 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329342
VERSION     XP_041329342.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473408.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="nuclear receptor coactivator 4 isoform X1"
                     /calculated_mol_wt=67752
     Region          15..147
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     Region          194..324
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     CDS             1..600
                     /gene="NCOA4"
                     /coded_by="XM_041473408.1:150..1952"
                     /db_xref="GeneID:121356702"
ORIGIN      
        1 msppqdrnrn scssetlakc lqakkdleta isgivkaeqq ikenwrevka kihshisrql
       61 eclrsrevwl feqvdliqql keealqqqaq qlywylgqfn clihqlehsy snelanqisi
      121 clerlesltl kpeessilnf eadtsylrqa itsfgsiktm qtserentsp wfpgqsyalm
      181 nceqqqmqcg pvsaslagwl lgsrpagvrq apyvpstnle ewvtqkcase psqdlnsskv
      241 cyfeqawgnl kdlenwllhn qqrdvagktd spgrkdstst lnssfstiek veeleslgqe
      301 emdlsdwllt pdtenasias dekwknefkp freecnlndw llkaetctsc rgsqsksvei
      361 enlgnlkcln ehldgkksat tsavnawllq hpqapfkved vckandlcas fsecvcdenc
      421 gkealckwll kkdgkdkngv pvqrdvpdle hektksaass wlspaqqlpg epmsaekady
      481 saeiaepwka llerpltswl akaehkaest eekeswekad ksfkspfldl lapfhlplnv
      541 nswvlasngl enanlppved kwllrkkaqd fglptvcdlf acmklsgdne kwlyrsplqm
//
LOCUS       XP_041329351             600 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329351
VERSION     XP_041329351.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473417.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="nuclear receptor coactivator 4 isoform X1"
                     /calculated_mol_wt=67752
     Region          15..147
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     Region          194..324
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     CDS             1..600
                     /gene="NCOA4"
                     /coded_by="XM_041473417.1:152..1954"
                     /db_xref="GeneID:121356702"
ORIGIN      
        1 msppqdrnrn scssetlakc lqakkdleta isgivkaeqq ikenwrevka kihshisrql
       61 eclrsrevwl feqvdliqql keealqqqaq qlywylgqfn clihqlehsy snelanqisi
      121 clerlesltl kpeessilnf eadtsylrqa itsfgsiktm qtserentsp wfpgqsyalm
      181 nceqqqmqcg pvsaslagwl lgsrpagvrq apyvpstnle ewvtqkcase psqdlnsskv
      241 cyfeqawgnl kdlenwllhn qqrdvagktd spgrkdstst lnssfstiek veeleslgqe
      301 emdlsdwllt pdtenasias dekwknefkp freecnlndw llkaetctsc rgsqsksvei
      361 enlgnlkcln ehldgkksat tsavnawllq hpqapfkved vckandlcas fsecvcdenc
      421 gkealckwll kkdgkdkngv pvqrdvpdle hektksaass wlspaqqlpg epmsaekady
      481 saeiaepwka llerpltswl akaehkaest eekeswekad ksfkspfldl lapfhlplnv
      541 nswvlasngl enanlppved kwllrkkaqd fglptvcdlf acmklsgdne kwlyrsplqm
//
LOCUS       XP_041329359             600 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329359
VERSION     XP_041329359.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473425.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="nuclear receptor coactivator 4 isoform X1"
                     /calculated_mol_wt=67752
     Region          15..147
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     Region          194..324
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     CDS             1..600
                     /gene="NCOA4"
                     /coded_by="XM_041473425.1:140..1942"
                     /db_xref="GeneID:121356702"
ORIGIN      
        1 msppqdrnrn scssetlakc lqakkdleta isgivkaeqq ikenwrevka kihshisrql
       61 eclrsrevwl feqvdliqql keealqqqaq qlywylgqfn clihqlehsy snelanqisi
      121 clerlesltl kpeessilnf eadtsylrqa itsfgsiktm qtserentsp wfpgqsyalm
      181 nceqqqmqcg pvsaslagwl lgsrpagvrq apyvpstnle ewvtqkcase psqdlnsskv
      241 cyfeqawgnl kdlenwllhn qqrdvagktd spgrkdstst lnssfstiek veeleslgqe
      301 emdlsdwllt pdtenasias dekwknefkp freecnlndw llkaetctsc rgsqsksvei
      361 enlgnlkcln ehldgkksat tsavnawllq hpqapfkved vckandlcas fsecvcdenc
      421 gkealckwll kkdgkdkngv pvqrdvpdle hektksaass wlspaqqlpg epmsaekady
      481 saeiaepwka llerpltswl akaehkaest eekeswekad ksfkspfldl lapfhlplnv
      541 nswvlasngl enanlppved kwllrkkaqd fglptvcdlf acmklsgdne kwlyrsplqm
//
LOCUS       XP_041329368             599 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329368
VERSION     XP_041329368.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473434.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..599
                     /product="nuclear receptor coactivator 4 isoform X2"
                     /calculated_mol_wt=67623
     Region          15..147
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     Region          193..323
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     CDS             1..599
                     /gene="NCOA4"
                     /coded_by="XM_041473434.1:210..2009"
                     /db_xref="GeneID:121356702"
ORIGIN      
        1 msppqdrnrn scssetlakc lqakkdleta isgivkaeqq ikenwrevka kihshisrql
       61 eclrsrevwl feqvdliqql keealqqqaq qlywylgqfn clihqlehsy snelanqisi
      121 clerlesltl kpeessilnf eadtsylrqa itsfgsiktm qtserentsp wfpgqsyalm
      181 nceqqmqcgp vsaslagwll gsrpagvrqa pyvpstnlee wvtqkcasep sqdlnsskvc
      241 yfeqawgnlk dlenwllhnq qrdvagktds pgrkdststl nssfstiekv eeleslgqee
      301 mdlsdwlltp dtenasiasd ekwknefkpf reecnlndwl lkaetctscr gsqsksveie
      361 nlgnlkclne hldgkksatt savnawllqh pqapfkvedv ckandlcasf secvcdencg
      421 kealckwllk kdgkdkngvp vqrdvpdleh ektksaassw lspaqqlpge pmsaekadys
      481 aeiaepwkal lerpltswla kaehkaeste ekeswekadk sfkspfldll apfhlplnvn
      541 swvlasngle nanlppvedk wllrkkaqdf glptvcdlfa cmklsgdnek wlyrsplqm
//
LOCUS       XP_041329376             600 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329376
VERSION     XP_041329376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473442.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="nuclear receptor coactivator 4 isoform X1"
                     /calculated_mol_wt=67752
     Region          15..147
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     Region          194..324
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     CDS             1..600
                     /gene="NCOA4"
                     /coded_by="XM_041473442.1:203..2005"
                     /db_xref="GeneID:121356702"
ORIGIN      
        1 msppqdrnrn scssetlakc lqakkdleta isgivkaeqq ikenwrevka kihshisrql
       61 eclrsrevwl feqvdliqql keealqqqaq qlywylgqfn clihqlehsy snelanqisi
      121 clerlesltl kpeessilnf eadtsylrqa itsfgsiktm qtserentsp wfpgqsyalm
      181 nceqqqmqcg pvsaslagwl lgsrpagvrq apyvpstnle ewvtqkcase psqdlnsskv
      241 cyfeqawgnl kdlenwllhn qqrdvagktd spgrkdstst lnssfstiek veeleslgqe
      301 emdlsdwllt pdtenasias dekwknefkp freecnlndw llkaetctsc rgsqsksvei
      361 enlgnlkcln ehldgkksat tsavnawllq hpqapfkved vckandlcas fsecvcdenc
      421 gkealckwll kkdgkdkngv pvqrdvpdle hektksaass wlspaqqlpg epmsaekady
      481 saeiaepwka llerpltswl akaehkaest eekeswekad ksfkspfldl lapfhlplnv
      541 nswvlasngl enanlppved kwllrkkaqd fglptvcdlf acmklsgdne kwlyrsplqm
//
LOCUS       XP_041329384             600 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329384
VERSION     XP_041329384.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473450.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="nuclear receptor coactivator 4 isoform X1"
                     /calculated_mol_wt=67752
     Region          15..147
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     Region          194..324
                     /region_name="ARA70"
                     /note="Nuclear coactivator; pfam12489"
                     /db_xref="CDD:463604"
     CDS             1..600
                     /gene="NCOA4"
                     /coded_by="XM_041473450.1:154..1956"
                     /db_xref="GeneID:121356702"
ORIGIN      
        1 msppqdrnrn scssetlakc lqakkdleta isgivkaeqq ikenwrevka kihshisrql
       61 eclrsrevwl feqvdliqql keealqqqaq qlywylgqfn clihqlehsy snelanqisi
      121 clerlesltl kpeessilnf eadtsylrqa itsfgsiktm qtserentsp wfpgqsyalm
      181 nceqqqmqcg pvsaslagwl lgsrpagvrq apyvpstnle ewvtqkcase psqdlnsskv
      241 cyfeqawgnl kdlenwllhn qqrdvagktd spgrkdstst lnssfstiek veeleslgqe
      301 emdlsdwllt pdtenasias dekwknefkp freecnlndw llkaetctsc rgsqsksvei
      361 enlgnlkcln ehldgkksat tsavnawllq hpqapfkved vckandlcas fsecvcdenc
      421 gkealckwll kkdgkdkngv pvqrdvpdle hektksaass wlspaqqlpg epmsaekady
      481 saeiaepwka llerpltswl akaehkaest eekeswekad ksfkspfldl lapfhlplnv
      541 nswvlasngl enanlppved kwllrkkaqd fglptvcdlf acmklsgdne kwlyrsplqm
//
LOCUS       XP_041329397            1067 aa            linear   VRT 06-MAY-2021
DEFINITION  vinculin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329397
VERSION     XP_041329397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473463.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1067
                     /product="vinculin isoform X1"
                     /calculated_mol_wt=116880
     Region          3..1067
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..1067
                     /gene="VCL"
                     /coded_by="XM_041473463.1:143..3346"
                     /db_xref="GeneID:121356739"
ORIGIN      
        1 mpvfhtrtie silepvaqqi shlvimheeg evdgkaipdl tapvsavqaa vsnlvrvgke
       61 tvqttedqil krdmppafik venactklvr aaqmlqadpy svpardylid gsrgilsgts
      121 dllltfdeae vrkiirvckg ileyltvaev vetmedlvty tknlgpgmtk makmiderqq
      181 elthqehrvm lvnsmntvke llpvlisamk ifvttknsks qgieealknr nftvekmsae
      241 ineiirvlql tswdedawas kkdteamkra lalidskmnq akgwlrdpna ppgdageqai
      301 rqildeagka gelcagkerr eilgtcktlg qmtdqladlr argqgatpma mqkaqqvsqg
      361 ldlltakven aarkleamtn skqaiakkid aaqnwladpn ggsegeehir gimaearkva
      421 elceepkerd dilrslgeis altaklsdlr rhgkgdspea ralakqiats lqnlqsktnr
      481 avantrpvka avhlegkieq aqrwidnptv adrgvgqaai rglvaegrrl anvmmgpyrq
      541 dllakcdrvd qlsaqlaela argegespqa raiaaqlqds lkdlkarmqe amtqevsdvf
      601 sdtttpikll avaatapsda pnrdevfeer aanfenhaar lgataekaaa vgtankttve
      661 giqatvksar eltpqvvsaa rillrnpgnq aayehfetmk nqwidnvekm tglvdeaidt
      721 kslldaseea ikkdldkckv amanmqpqml vagatsiarr anrillvakr evensedpkf
      781 reavkaasde lsktispmvm dakavagnis dpglqksfld sgykilgava kvreafqpqe
      841 pdfpppppdl ehlhltdela ppkpplpege vppprppppe ekdeefpeqk ageainqpmm
      901 maarqlhdea rkwsskgndi iaaakrmall maemsrlvrg gsgnkraliq cakdiakasd
      961 evtrlakeva kqctdkrirt nllqvcerip tistqlkils tvkatmlgrt nisdeeseqa
     1021 temlvhnaqn lmqsvketvr eaeaasikir tdagftlrwv rktpwyq
//
LOCUS       XP_041329399            1066 aa            linear   VRT 06-MAY-2021
DEFINITION  vinculin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329399
VERSION     XP_041329399.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473465.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1066
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1066
                     /product="vinculin isoform X2"
                     /calculated_mol_wt=116752
     Region          3..1066
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..1066
                     /gene="VCL"
                     /coded_by="XM_041473465.1:255..3455"
                     /db_xref="GeneID:121356739"
ORIGIN      
        1 mpvfhtrtie silepvaqqi shlvimheeg evdgkaipdl tapvsavqaa vsnlvrvgke
       61 tvqttedqil krdmppafik venactklvr aaqmlqadpy svpardylid gsrgilsgts
      121 dllltfdeae vrkiirvckg ileyltvaev vetmedlvty tknlgpgmtk makmiderqq
      181 elthqehrvm lvnsmntvke llpvlisamk ifvttknsks qgieealknr nftvekmsae
      241 ineiirvlql tswdedawas kdteamkral alidskmnqa kgwlrdpnap pgdageqair
      301 qildeagkag elcagkerre ilgtcktlgq mtdqladlra rgqgatpmam qkaqqvsqgl
      361 dlltakvena arkleamtns kqaiakkida aqnwladpng gsegeehirg imaearkvae
      421 lceepkerdd ilrslgeisa ltaklsdlrr hgkgdspear alakqiatsl qnlqsktnra
      481 vantrpvkaa vhlegkieqa qrwidnptva drgvgqaair glvaegrrla nvmmgpyrqd
      541 llakcdrvdq lsaqlaelaa rgegespqar aiaaqlqdsl kdlkarmqea mtqevsdvfs
      601 dtttpiklla vaatapsdap nrdevfeera anfenhaarl gataekaaav gtankttveg
      661 iqatvksare ltpqvvsaar illrnpgnqa ayehfetmkn qwidnvekmt glvdeaidtk
      721 slldaseeai kkdldkckva manmqpqmlv agatsiarra nrillvakre vensedpkfr
      781 eavkaasdel sktispmvmd akavagnisd pglqksflds gykilgavak vreafqpqep
      841 dfpppppdle hlhltdelap pkpplpegev ppprppppee kdeefpeqka geainqpmmm
      901 aarqlhdear kwsskgndii aaakrmallm aemsrlvrgg sgnkraliqc akdiakasde
      961 vtrlakevak qctdkrirtn llqvceript istqlkilst vkatmlgrtn isdeeseqat
     1021 emlvhnaqnl mqsvketvre aeaasikirt dagftlrwvr ktpwyq
//
LOCUS       XP_041329408            1136 aa            linear   VRT 06-MAY-2021
DEFINITION  vinculin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041329408
VERSION     XP_041329408.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473474.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1136
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1136
                     /product="vinculin isoform X3"
                     /calculated_mol_wt=124519
     Region          3..1136
                     /region_name="Vinculin"
                     /note="Vinculin family; pfam01044"
                     /db_xref="CDD:460040"
     CDS             1..1136
                     /gene="VCL"
                     /coded_by="XM_041473474.1:255..3665"
                     /db_xref="GeneID:121356739"
ORIGIN      
        1 mpvfhtrtie silepvaqqi shlvimheeg evdgkaipdl tapvsavqaa vsnlvrvgke
       61 tvqttedqil krdmppafik venactklvr aaqmlqadpy svpardylid gsrgilsgts
      121 dllltfdeae vrkiirvckg ileyltvaev vetmedlvty tknlgpgmtk makmiderqq
      181 elthqehrvm lvnsmntvke llpvlisamk ifvttknsks qgieealknr nftvekmsae
      241 ineiirvlql tswdedawas kdteamkral alidskmnqa kgwlrdpnap pgdageqair
      301 qildeagkag elcagkerre ilgtcktlgq mtdqladlra rgqgatpmam qkaqqvsqgl
      361 dlltakvena arkleamtns kqaiakkida aqnwladpng gsegeehirg imaearkvae
      421 lceepkerdd ilrslgeisa ltaklsdlrr hgkgdspear alakqiatsl qnlqsktnra
      481 vantrpvkaa vhlegkieqa qrwidnptva drgvgqaair glvaegrrla nvmmgpyrqd
      541 llakcdrvdq lsaqlaelaa rgegespqar aiaaqlqdsl kdlkarmqea mtqevsdvfs
      601 dtttpiklla vaatapsdap nrdevfeera anfenhaarl gataekaaav gtankttveg
      661 iqatvksare ltpqvvsaar illrnpgnqa ayehfetmkn qwidnvekmt glvdeaidtk
      721 slldaseeai kkdldkckva manmqpqmlv agatsiarra nrillvakre vensedpkfr
      781 eavkaasdel sktispmvmd akavagnisd pglqksflds gykilgavak vreafqpqep
      841 dfpppppdle hlhltdelap pkpplpegev ppprppppee kdeefpeqka geainqpmmm
      901 aarqlhdear kwsskpdvtv ineaaeagvd ideeddadve ftlpydiedd yepelllmpt
      961 nqpvnqpila aaqslhreat kwsskgndii aaakrmallm aemsrlvrgg sgnkraliqc
     1021 akdiakasde vtrlakevak qctdkrirtn llqvceript istqlkilst vkatmlgrtn
     1081 isdeeseqat emlvhnaqnl mqsvketvre aeaasikirt dagftlrwvr ktpwyq
//
LOCUS       XP_041329420             418 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit mu-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329420
VERSION     XP_041329420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="AP-3 complex subunit mu-1"
                     /calculated_mol_wt=46927
     Region          3..141
                     /region_name="AP3_Mu_N"
                     /note="AP-3 complex subunit mu N-terminal domain; cd14837"
                     /db_xref="CDD:341441"
     Site            order(18,21,46..47,55,57,59,71..73,75..77,80,84,110..111,
                     114..115,117..119,121..124,133,135..136)
                     /site_type="other"
                     /note="putative AP-3 beta interface [polypeptide binding]"
                     /db_xref="CDD:341441"
     Region          165..418
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     CDS             1..418
                     /gene="AP3M1"
                     /coded_by="XM_041473486.1:91..1347"
                     /db_xref="GeneID:121356750"
ORIGIN      
        1 mihslflinc sgdiflekhw ksvvsqsvcd yffeaqekai dvenvppvis tphhylisiy
       61 rdkiffvsvi qtevpplfvi eflhrvadtf qdyfgecset aikdnvvivy elleemldng
      121 fplatesnil kelikpptil rsvvnsitgs snvgdtlptg qlsnipwrra gvkytnneay
      181 fdvieeidai idksgstvfa eiqgvidsci klsgmpdlsl sfmnprlldd vsfhpcirfk
      241 rweservlsf ippdgnfrli syrvssqnlv aipvyvkhmi sfkentssgr fdvtigpkqn
      301 mgktvegvvm tvhmpkavln mnltatqgsy tfdpvtkvlt wdvgkitpqk lpnlkgivnl
      361 qsgapkpeen pslniqfkiq qlaisglkvn rldmygekyk pfkgvkyitk agkfqvrt
//
LOCUS       XP_041329433             390 aa            linear   VRT 06-MAY-2021
DEFINITION  adenosine kinase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329433
VERSION     XP_041329433.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473499.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..390
                     /product="adenosine kinase isoform X1"
                     /calculated_mol_wt=42961
     Region          57..389
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(59,61,63,83,108..110,113,168,179,181,183,215,246,
                     341..342,345)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238573"
     Site            order(310,312..313,316,329,331,337,340,343..344,347,372,
                     376)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238573"
     CDS             1..390
                     /gene="ADK"
                     /coded_by="XM_041473499.1:16..1188"
                     /db_xref="GeneID:121356758"
ORIGIN      
        1 maarpgggag pprragrger sgarrtppsa kmaagepqak klkleqkqls envlfgmgnp
       61 lldicavvdk dfldkyglkp ndqilaeekh kelfeelvkk fkveyhaggs tqnsvkvaqw
      121 miqkphkaat ffgcigkdkf geilkkkaee ahvdahyyeq seeptgtcaa citsdnrslv
      181 anlaaancyk kekhldlekn wklvekakvy yiagffltvs peavlkvaaq asannkifsl
      241 nlsapfisqf ykepmmkvmp yvdvlfgnet eaatfareqg fetedikeia rktqalpkvn
      301 tkrqrivvft qgkddtvlat enevttfpvl vsdqseivdt ngagdafvgg flsqlvydrp
      361 vteciraghy aasviikrsg ctfpekpdfh
//
LOCUS       XP_041329442             345 aa            linear   VRT 06-MAY-2021
DEFINITION  adenosine kinase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329442
VERSION     XP_041329442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..345
                     /product="adenosine kinase isoform X2"
                     /calculated_mol_wt=38316
     Region          12..344
                     /region_name="ribokinase_pfkB_like"
                     /note="ribokinase/pfkB superfamily: Kinases that accept a
                     wide variety of substrates, including carbohydrates and
                     aromatic small molecules, all are phosphorylated at a
                     hydroxyl group. The superfamily includes ribokinase,
                     fructokinase, ketohexokinase; cl00192"
                     /db_xref="CDD:469648"
     Site            order(14,16,18,38,63..65,68,123,134,136,138,170,201,
                     296..297,300)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238573"
     Site            order(265,267..268,271,284,286,292,295,298..299,302,327,
                     331)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238573"
     CDS             1..345
                     /gene="ADK"
                     /coded_by="XM_041473508.1:106..1143"
                     /db_xref="GeneID:121356758"
ORIGIN      
        1 matlsenvlf gmgnplldic avvdkdfldk yglkpndqil aeekhkelfe elvkkfkvey
       61 haggstqnsv kvaqwmiqkp hkaatffgci gkdkfgeilk kkaeeahvda hyyeqseept
      121 gtcaacitsd nrslvanlaa ancykkekhl dleknwklve kakvyyiagf fltvspeavl
      181 kvaaqasann kifslnlsap fisqfykepm mkvmpyvdvl fgneteaatf areqgfeted
      241 ikeiarktqa lpkvntkrqr ivvftqgkdd tvlatenevt tfpvlvsdqs eivdtngagd
      301 afvggflsql vydrpvteci raghyaasvi ikrsgctfpe kpdfh
//
LOCUS       XP_041329454             520 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2B catalytic subunit beta
            isoform isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329454
VERSION     XP_041329454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="serine/threonine-protein phosphatase 2B
                     catalytic subunit beta isoform isoform X1"
                     /calculated_mol_wt=58544
     Region          45..349
                     /region_name="MPP_PP2B"
                     /note="PP2B, metallophosphatase domain; cd07416"
                     /db_xref="CDD:277361"
     Site            order(57,59,94,96,122,154,163,203,285,318,345)
                     /site_type="other"
                     /note="CN-CyPA-CsA complex [polypeptide binding]"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,126,154..155,203,236,258,285,287)
                     /site_type="active"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,154,203,285)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277361"
     CDS             1..520
                     /gene="PPP3CB"
                     /coded_by="XM_041473520.1:124..1686"
                     /db_xref="GeneID:121356767"
ORIGIN      
        1 msakegskvl lltphatser avkavpfppt hrltseevfd tdgrprvdil knhlikegrv
       61 deeialriin egaailrrek tmieveapit vcgdihgqff dlmklfevgg spantrylfl
      121 gdyvdrgyfs iecvlylwvl kilypstlfl lrgnhecrhl teyftfkqec kikyservyd
      181 acmeafdclp laallnqqfl cvhgglspei ntlddirrld rfkeppafgp mcdllwsdps
      241 edfgnenspe hfshntvrgc syfysypavc eflqnnnlls iiraheaqda gyrmyrksqt
      301 tgfpslitif sapnyldvyn nkaavlkyen nvmnirqfnc sphpywlpnf mdvftwslpf
      361 vgekvtemlv nvlsicsdde lmtegedqfd vgtaaarkei irnkiraigk marvfsvlre
      421 esesvltlkg ltptgmlpsg vlaggrqtlq satveaieae kairgfspqh ricsfeeakg
      481 ldrinermpp rkdalqqdgi ntvntanang nngtgnnnaq
//
LOCUS       XP_041329467             519 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2B catalytic subunit beta
            isoform isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041329467
VERSION     XP_041329467.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473533.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..519
                     /product="serine/threonine-protein phosphatase 2B
                     catalytic subunit beta isoform isoform X2"
                     /calculated_mol_wt=58445
     Region          45..349
                     /region_name="MPP_PP2B"
                     /note="PP2B, metallophosphatase domain; cd07416"
                     /db_xref="CDD:277361"
     Site            order(57,59,94,96,122,154,163,203,285,318,345)
                     /site_type="other"
                     /note="CN-CyPA-CsA complex [polypeptide binding]"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,126,154..155,203,236,258,285,287)
                     /site_type="active"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,154,203,285)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277361"
     CDS             1..519
                     /gene="PPP3CB"
                     /coded_by="XM_041473533.1:124..1683"
                     /db_xref="GeneID:121356767"
ORIGIN      
        1 msakegskvl lltphatser avkavpfppt hrltseevfd tdgrprvdil knhlikegrv
       61 deeialriin egaailrrek tmieveapit vcgdihgqff dlmklfevgg spantrylfl
      121 gdyvdrgyfs iecvlylwvl kilypstlfl lrgnhecrhl teyftfkqec kikyservyd
      181 acmeafdclp laallnqqfl cvhgglspei ntlddirrld rfkeppafgp mcdllwsdps
      241 edfgnenspe hfshntvrgc syfysypavc eflqnnnlls iiraheaqda gyrmyrksqt
      301 tgfpslitif sapnyldvyn nkaavlkyen nvmnirqfnc sphpywlpnf mdvftwslpf
      361 vgekvtemlv nvlsicsdde lmtegedqfd gtaaarkeii rnkiraigkm arvfsvlree
      421 sesvltlkgl tptgmlpsgv laggrqtlqs atveaieaek airgfspqhr icsfeeakgl
      481 drinermppr kdalqqdgin tvntanangn ngtgnnnaq
//
LOCUS       XP_041329478             510 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2B catalytic subunit beta
            isoform isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041329478
VERSION     XP_041329478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="serine/threonine-protein phosphatase 2B
                     catalytic subunit beta isoform isoform X3"
                     /calculated_mol_wt=57502
     Region          45..349
                     /region_name="MPP_PP2B"
                     /note="PP2B, metallophosphatase domain; cd07416"
                     /db_xref="CDD:277361"
     Site            order(57,59,94,96,122,154,163,203,285,318,345)
                     /site_type="other"
                     /note="CN-CyPA-CsA complex [polypeptide binding]"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,126,154..155,203,236,258,285,287)
                     /site_type="active"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,154,203,285)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277361"
     CDS             1..510
                     /gene="PPP3CB"
                     /coded_by="XM_041473544.1:124..1656"
                     /db_xref="GeneID:121356767"
ORIGIN      
        1 msakegskvl lltphatser avkavpfppt hrltseevfd tdgrprvdil knhlikegrv
       61 deeialriin egaailrrek tmieveapit vcgdihgqff dlmklfevgg spantrylfl
      121 gdyvdrgyfs iecvlylwvl kilypstlfl lrgnhecrhl teyftfkqec kikyservyd
      181 acmeafdclp laallnqqfl cvhgglspei ntlddirrld rfkeppafgp mcdllwsdps
      241 edfgnenspe hfshntvrgc syfysypavc eflqnnnlls iiraheaqda gyrmyrksqt
      301 tgfpslitif sapnyldvyn nkaavlkyen nvmnirqfnc sphpywlpnf mdvftwslpf
      361 vgekvtemlv nvlsicsdde lmtegedqfd vgtaaarkei irnkiraigk marvfsvlre
      421 esesvltlkg ltptgmlpsg vlaggrqtlq sairgfspqh ricsfeeakg ldrinermpp
      481 rkdalqqdgi ntvntanang nngtgnnnaq
//
LOCUS       XP_041329484             509 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2B catalytic subunit beta
            isoform isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041329484
VERSION     XP_041329484.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473550.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="serine/threonine-protein phosphatase 2B
                     catalytic subunit beta isoform isoform X4"
                     /calculated_mol_wt=57403
     Region          45..349
                     /region_name="MPP_PP2B"
                     /note="PP2B, metallophosphatase domain; cd07416"
                     /db_xref="CDD:277361"
     Site            order(57,59,94,96,122,154,163,203,285,318,345)
                     /site_type="other"
                     /note="CN-CyPA-CsA complex [polypeptide binding]"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,126,154..155,203,236,258,285,287)
                     /site_type="active"
                     /db_xref="CDD:277361"
     Site            order(94,96,122,154,203,285)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277361"
     CDS             1..509
                     /gene="PPP3CB"
                     /coded_by="XM_041473550.1:124..1653"
                     /db_xref="GeneID:121356767"
ORIGIN      
        1 msakegskvl lltphatser avkavpfppt hrltseevfd tdgrprvdil knhlikegrv
       61 deeialriin egaailrrek tmieveapit vcgdihgqff dlmklfevgg spantrylfl
      121 gdyvdrgyfs iecvlylwvl kilypstlfl lrgnhecrhl teyftfkqec kikyservyd
      181 acmeafdclp laallnqqfl cvhgglspei ntlddirrld rfkeppafgp mcdllwsdps
      241 edfgnenspe hfshntvrgc syfysypavc eflqnnnlls iiraheaqda gyrmyrksqt
      301 tgfpslitif sapnyldvyn nkaavlkyen nvmnirqfnc sphpywlpnf mdvftwslpf
      361 vgekvtemlv nvlsicsdde lmtegedqfd gtaaarkeii rnkiraigkm arvfsvlree
      421 sesvltlkgl tptgmlpsgv laggrqtlqs airgfspqhr icsfeeakgl drinermppr
      481 kdalqqdgin tvntanangn ngtgnnnaq
//
LOCUS       XP_041329503             460 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A7 [Pyrgilauda ruficollis].
ACCESSION   XP_041329503
VERSION     XP_041329503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473569.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..460
                     /product="annexin A7"
                     /calculated_mol_wt=49178
     Region          <7..145
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          161..226
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          233..298
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          317..382
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          392..457
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..460
                     /gene="ANXA7"
                     /coded_by="XM_041473569.1:100..1482"
                     /db_xref="GeneID:121356786"
ORIGIN      
        1 msypgyppsd gypafpgypp tgqesvyppa gqyaypavpg gfppsgggty paappnagfp
       61 gaagypapgg yptsggfpga pqaggmppyp ggpgfavppt gpgfggypqq ppaqsyaggg
      121 paqipgfpgg qvpspmtgpp aavvqctqgt iqaapnfdag rdaeilrkam kgfgtdeqai
      181 invvanrsnd qrqkikaafk tmygkdlikd lkselsgnve elilalfmps tyydawslrh
      241 amkgagtqes vlieilctrt nqeireivnc yksefgrdie qdirsdtsgh ferllismcq
      301 gnrdenqtvd yqkaqedaqr lyqagegklg tdescfnmvl asrsfpqlka tveaysrian
      361 rdllssidre fsgnverglk tivqcalnrp affaerlyhs mkgagtddst lirivvtrse
      421 idlvqikqmf tqmyqktlat miasdtsgdy rklllaivgq
//
LOCUS       XP_041329524             346 aa            linear   VRT 06-MAY-2021
DEFINITION  growth hormone-inducible transmembrane protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329524
VERSION     XP_041329524.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473590.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="growth hormone-inducible transmembrane protein"
                     /calculated_mol_wt=36279
     Region          97..344
                     /region_name="GHITM"
                     /note="Growth-hormone inducible transmembrane protein;
                     cd10431"
                     /db_xref="CDD:198413"
     CDS             1..346
                     /gene="GHITM"
                     /coded_by="XM_041473590.1:176..1216"
                     /db_xref="GeneID:121356796"
ORIGIN      
        1 mlaarlvclr alpcqtirpt itqaspalrs ssikayrlwq psqsyatrar mgtrrgklgq
       61 dvkeaafeps aeaalkadrl gkfilaggaa vglgalcyyg mgmssetgai eraaiwpqyv
      121 kdriqstymy fagsigmtal saaavsrtpa lmnlmtkgsw laigatfaam igagmlvrti
      181 syehnpvakh aawmlhsgvm gavvaplafl ggplliraaw ytagivggls tvamcapsek
      241 flnmgaplgi glgfviassi gsmflpptsa fgaglysvav ygglvlfgmf llydtqlvvk
      301 raetlpfygv vkydpinacl giytdtlnif irvatmlagg gggrkk
//
LOCUS       XP_041329538             266 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity protein phosphatase 13-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329538
VERSION     XP_041329538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473604.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="dual specificity protein phosphatase 13-like"
                     /calculated_mol_wt=28423
     Region          115..260
                     /region_name="DUSP13A"
                     /note="dual specificity protein phosphatase 13 isoform A;
                     cd14580"
                     /db_xref="CDD:350428"
     CDS             1..266
                     /gene="LOC121356800"
                     /coded_by="XM_041473604.1:36..836"
                     /db_xref="GeneID:121356800"
ORIGIN      
        1 mptlvlhmfg aavpvgagqr raaspgagmp gcqpgwpapa pahlaacpgt eragsalcps
       61 sgrrerrpal dlsmsgagap dtqdaegggt cpenvpslke ielllntgrp scnhvdevwp
      121 nlflgdlvta qhnrfilwkm gvthvlnaah gtsysqggqd fygatidyyg vpahdlpsfd
      181 isqfffsaaq fihnalntpg akilvhcavg vsrsaslvla ylminhhlpl veaiktvkeh
      241 rwispnrgfl khlrnldvql rqrkdc
//
LOCUS       XP_041329550             204 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity protein phosphatase 13-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329550
VERSION     XP_041329550.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473616.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="dual specificity protein phosphatase 13-like"
                     /calculated_mol_wt=22354
     Region          27..189
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..204
                     /gene="LOC121356808"
                     /coded_by="XM_041473616.1:152..766"
                     /db_xref="GeneID:121356808"
ORIGIN      
        1 mqrsskmlht rdpssltsst syetpalsdl qqllwlrggs dnhvdqvwpn iylgdawaar
       61 skatlrslni thilnaadgp ysintganyy adlqieyygi eafddpsfdl siffydaanf
      121 igkalnssgg kvfvhcamgv srsatlvlaf lmihenmtlv dalktvsakr nicpnsgfls
      181 qlrvldikln eerkgsrasa irgl
//
LOCUS       XP_041329553             204 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity protein phosphatase 13-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329553
VERSION     XP_041329553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="dual specificity protein phosphatase 13-like"
                     /calculated_mol_wt=22354
     Region          27..189
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..204
                     /gene="LOC121356808"
                     /coded_by="XM_041473619.1:207..821"
                     /db_xref="GeneID:121356808"
ORIGIN      
        1 mqrsskmlht rdpssltsst syetpalsdl qqllwlrggs dnhvdqvwpn iylgdawaar
       61 skatlrslni thilnaadgp ysintganyy adlqieyygi eafddpsfdl siffydaanf
      121 igkalnssgg kvfvhcamgv srsatlvlaf lmihenmtlv dalktvsakr nicpnsgfls
      181 qlrvldikln eerkgsrasa irgl
//
LOCUS       XP_041329562             204 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity protein phosphatase 13-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329562
VERSION     XP_041329562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="dual specificity protein phosphatase 13-like"
                     /calculated_mol_wt=22354
     Region          27..189
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..204
                     /gene="LOC121356808"
                     /coded_by="XM_041473628.1:178..792"
                     /db_xref="GeneID:121356808"
ORIGIN      
        1 mqrsskmlht rdpssltsst syetpalsdl qqllwlrggs dnhvdqvwpn iylgdawaar
       61 skatlrslni thilnaadgp ysintganyy adlqieyygi eafddpsfdl siffydaanf
      121 igkalnssgg kvfvhcamgv srsatlvlaf lmihenmtlv dalktvsakr nicpnsgfls
      181 qlrvldikln eerkgsrasa irgl
//
LOCUS       XP_041329576            1084 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptopodin 2-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041329576
VERSION     XP_041329576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1084
                     /product="synaptopodin 2-like protein"
                     /calculated_mol_wt=116373
     Region          8..85
                     /region_name="PDZ_SYNPO2-like"
                     /note="PDZ domain of synaptopodin 2 (SYNPO2), synaptopodin
                     2-like protein (SYNPO2L), and related domains; cd10820"
                     /db_xref="CDD:467264"
     Site            order(16..22,34,37,66,70,73..74)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467264"
     Region          91..>264
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <535..1023
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1084
                     /gene="SYNPO2L"
                     /coded_by="XM_041473642.1:213..3467"
                     /db_xref="GeneID:121356824"
ORIGIN      
        1 mgaeeemlit lsggapwgfr lqggseqkrp lqvskirkrs kacrgglwen dvlvsingks
       61 caglshanam qiidssngml nirvkrivgg dqtgpwlqrs pspgqrvlsp psvptpsaql
      121 lssepagapa ttqpsqpwrs qrhlesltsp pdseayyget dsdadnvaqe khrrarkksp
      181 rsppdsttgr adapqdevsl seqsgyesmp eaaaqggael agssgvakre ivclpgsrtd
      241 tpfsdsegql rppsaegrep speamllpha tkairaerhl ipmvgpvehp idedltttyt
      301 ekakqaklhr hesiqeknvk eaktkcrtia slltdapnph skgvlmfkkr rqrakkytlv
      361 sfgsvdedrs yeeedgvfpt sesefdeegf sdarsltnhs dwdntyldie ksksdseqke
      421 ekqkglseas gkgarlfeqq reragkytve ktpvqkspel apaaqpkqgt vngdmpvpek
      481 adnmplsihl eavqvpskqp atvptqllta psptffpppp stpdpfsass tsmfnrsarp
      541 ftpgfsgqrp atssvifrpp apkkptenlg gqstvvppfs plvpgtpana pvptqrgpvs
      601 sstslyipap grstsplesq pkvggsasev kpsantarts ttsiflsaps kpggdmasaa
      661 sqprvpgtas sslyispaps qhmrsssplp kqpspaitpa mprppseplt sreqrisvpa
      721 prtgilqear rrgnkkpmfs kieekkknsp npellslvqn ldekpkgdhp aagfesgpee
      781 dflslgaeac nfmqssgrkf ktpppvapkp qqdaglvnga qdmpqlkgkg aelfakrqsr
      841 mdkfvvettp kpeykprtps pspslpscwk yspnirappp iaynpmhspf yplaasksqa
      901 skaeskvkka pgqksgikvi dlmrhqpyql ksamfcfgdp pssstqntpg qptpqasssf
      961 maakqipvki aktqeirrfs tpapmpasss laptvlvprs attldeplwr temassapat
     1021 papfqvelsp spkpyqsspe pgqvgqgppp nsasasrfqv arpkfsaart gmqanvwrps
     1081 fghh
//
LOCUS       XP_041329587            1055 aa            linear   VRT 06-MAY-2021
DEFINITION  serine-rich coiled-coil domain-containing protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329587
VERSION     XP_041329587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1055
                     /product="serine-rich coiled-coil domain-containing
                     protein 2 isoform X1"
                     /calculated_mol_wt=115533
     Region          <865..1013
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..1055
                     /gene="CCSER2"
                     /coded_by="XM_041473653.1:220..3387"
                     /db_xref="GeneID:121356833"
ORIGIN      
        1 meeknqnrts lvsrlpkygt ktlgavlqpm pngtavnlag snggknynkh ngtvgmssfa
       61 fnwkksnkyq lndqngrean arrnsnekli dsekypqsqg algndelrvg lnstasvask
      121 aakqtnmfvs steelnpksi pglsssakft kgtlsgrtys glnaprsnln gfygnrpvvg
      181 lqrpransga trtnsgesla qstdnaskaf scdkmvrsqs fshsiqnsfl pttsltrshs
      241 fnkavdltrp yhsqnlaart sqrsallsrn acqldvpngn epmkygftra ysavsapcsk
      301 kpplsngsgs apsygyrlsr psllkptrqr fagnavvdgs ksaapdtrav esaeisatin
      361 ravdknsile sraqrtepge alreglgkhg skvmcmsddg deisisslss sekndlsedf
      421 sddfidieea nrtvqiqqke sclqelehgs rtsiepftsl kegggsccna ddwldinvsa
      481 vddnsestkh ttdnvissem nyragssfel spsdssdgty mwdeeglepi gsvhpcgsyd
      541 ssemnsidil nnldscdled ddlmldvdlp edpprdkeec enmsryerqd rnarphqegf
      601 wkrapqqrwn tqehyhlght dhyihgkndl nrgsnylepa vgpresygag sgcaaprala
      661 entvmldemt lrhmvqdcta vktqllrlkr llhqndenvs lqditfsvps spepqepest
      721 fkmddllnei rqlkdelrkk detinqleqq latrcncqkd sqkspgavra cadkftqtsw
      781 rrsspqvlqp ssslpnstdl aqgkliktpr ieahseypkp dlhdnrnhqs rnaahislqn
      841 slndvnsstn vqlntkdena syldnlkskn tedpgevasn kkgtlpprsh fqtsaradap
      901 evqtglpvrg qpsftnqasq pktsrivkpp talvpptmav plrsadhsaa akellplsss
      961 tqpqptsgqd nlkgkqsqkv sklrpptmsf vkskqvssqk stpvppepqn tslksniprp
     1021 pvqrkenvqt hssgvhpgds mpsgrhsrlp kpkth
//
LOCUS       XP_041329596            1054 aa            linear   VRT 06-MAY-2021
DEFINITION  serine-rich coiled-coil domain-containing protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329596
VERSION     XP_041329596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1054
                     /product="serine-rich coiled-coil domain-containing
                     protein 2 isoform X2"
                     /calculated_mol_wt=115462
     Region          <864..1012
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..1054
                     /gene="CCSER2"
                     /coded_by="XM_041473662.1:220..3384"
                     /db_xref="GeneID:121356833"
ORIGIN      
        1 meeknqnrts lvsrlpkygt ktlgavlqpm pngtavnlag snggknynkh ngtvgmssfa
       61 fnwkksnkyq lndqngrean arrnsnekli dsekypqsqg algndelrvg lnstasvask
      121 aakqtnmfvs steelnpksi pglsssakft kgtlsgrtys glnaprsnln gfygnrpvvg
      181 lqrpransga trtnsgesla qstdnaskaf scdkmvrsqs fshsiqnsfl pttsltrshs
      241 fnkavdltrp yhsqnlaart sqrsallsrn acqldvpngn epmkygftra ysavsapcsk
      301 kpplsngsgs apsygyrlsr psllkptrqr fagnavvdgs ksaapdtrav esaeisatin
      361 ravdknsile sraqrtepge alreglgkhg skvmcmsddg deisisslss sekndlsedf
      421 sddfidieea nrtvqiqqke sclqelehgs rtsiepftsl kegggsccna ddwldinvsv
      481 ddnsestkht tdnvissemn yragssfels psdssdgtym wdeeglepig svhpcgsyds
      541 semnsidiln nldscdledd dlmldvdlpe dpprdkeece nmsryerqdr narphqegfw
      601 krapqqrwnt qehyhlghtd hyihgkndln rgsnylepav gpresygags gcaapralae
      661 ntvmldemtl rhmvqdctav ktqllrlkrl lhqndenvsl qditfsvpss pepqepestf
      721 kmddllneir qlkdelrkkd etinqleqql atrcncqkds qkspgavrac adkftqtswr
      781 rsspqvlqps sslpnstdla qgkliktpri eahseypkpd lhdnrnhqsr naahislqns
      841 lndvnsstnv qlntkdenas yldnlksknt edpgevasnk kgtlpprshf qtsaradape
      901 vqtglpvrgq psftnqasqp ktsrivkppt alvpptmavp lrsadhsaaa kellplssst
      961 qpqptsgqdn lkgkqsqkvs klrpptmsfv kskqvssqks tpvppepqnt slksniprpp
     1021 vqrkenvqth ssgvhpgdsm psgrhsrlpk pkth
//
LOCUS       XP_041329604             843 aa            linear   VRT 06-MAY-2021
DEFINITION  serine-rich coiled-coil domain-containing protein 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329604
VERSION     XP_041329604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..843
                     /product="serine-rich coiled-coil domain-containing
                     protein 2 isoform X3"
                     /calculated_mol_wt=92763
     CDS             1..843
                     /gene="CCSER2"
                     /coded_by="XM_041473670.1:220..2751"
                     /db_xref="GeneID:121356833"
ORIGIN      
        1 meeknqnrts lvsrlpkygt ktlgavlqpm pngtavnlag snggknynkh ngtvgmssfa
       61 fnwkksnkyq lndqngrean arrnsnekli dsekypqsqg algndelrvg lnstasvask
      121 aakqtnmfvs steelnpksi pglsssakft kgtlsgrtys glnaprsnln gfygnrpvvg
      181 lqrpransga trtnsgesla qstdnaskaf scdkmvrsqs fshsiqnsfl pttsltrshs
      241 fnkavdltrp yhsqnlaart sqrsallsrn acqldvpngn epmkygftra ysavsapcsk
      301 kpplsngsgs apsygyrlsr psllkptrqr fagnavvdgs ksaapdtrav esaeisatin
      361 ravdknsile sraqrtepge alreglgkhg skvmcmsddg deisisslss sekndlsedf
      421 sddfidieea nrtvqiqqke sclqelehgs rtsiepftsl kegggsccna ddwldinvsa
      481 vddnsestkh ttdnvissem nyragssfel spsdssdgty mwdeeglepi gsvhpcgsyd
      541 ssemnsidil nnldscdled ddlmldvdlp edpprdkeec enmsryerqd rnarphqegf
      601 wkrapqqrwn tqehyhlght dhyihgkndl nrgsnylepa vgpresygag sgcaaprala
      661 entvmldemt lrhmvqdcta vktqllrlkr llhqndenvs lqditfsvps spepqepest
      721 fkmddllnei rqlkdelrkk detinqleqq latrcncqkd sqkspgavra cadkftqtsw
      781 rrssggysap sfspwqgsfq giprsvpphr rqtssttafq qpsqfhrprp gktnknstyr
      841 gpq
//
LOCUS       XP_041329613             842 aa            linear   VRT 06-MAY-2021
DEFINITION  serine-rich coiled-coil domain-containing protein 2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329613
VERSION     XP_041329613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..842
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..842
                     /product="serine-rich coiled-coil domain-containing
                     protein 2 isoform X4"
                     /calculated_mol_wt=92692
     CDS             1..842
                     /gene="CCSER2"
                     /coded_by="XM_041473679.1:220..2748"
                     /db_xref="GeneID:121356833"
ORIGIN      
        1 meeknqnrts lvsrlpkygt ktlgavlqpm pngtavnlag snggknynkh ngtvgmssfa
       61 fnwkksnkyq lndqngrean arrnsnekli dsekypqsqg algndelrvg lnstasvask
      121 aakqtnmfvs steelnpksi pglsssakft kgtlsgrtys glnaprsnln gfygnrpvvg
      181 lqrpransga trtnsgesla qstdnaskaf scdkmvrsqs fshsiqnsfl pttsltrshs
      241 fnkavdltrp yhsqnlaart sqrsallsrn acqldvpngn epmkygftra ysavsapcsk
      301 kpplsngsgs apsygyrlsr psllkptrqr fagnavvdgs ksaapdtrav esaeisatin
      361 ravdknsile sraqrtepge alreglgkhg skvmcmsddg deisisslss sekndlsedf
      421 sddfidieea nrtvqiqqke sclqelehgs rtsiepftsl kegggsccna ddwldinvsv
      481 ddnsestkht tdnvissemn yragssfels psdssdgtym wdeeglepig svhpcgsyds
      541 semnsidiln nldscdledd dlmldvdlpe dpprdkeece nmsryerqdr narphqegfw
      601 krapqqrwnt qehyhlghtd hyihgkndln rgsnylepav gpresygags gcaapralae
      661 ntvmldemtl rhmvqdctav ktqllrlkrl lhqndenvsl qditfsvpss pepqepestf
      721 kmddllneir qlkdelrkkd etinqleqql atrcncqkds qkspgavrac adkftqtswr
      781 rssggysaps fspwqgsfqg iprsvpphrr qtssttafqq psqfhrprpg ktnknstyrg
      841 pq
//
LOCUS       XP_041329626             549 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121356851 [Pyrgilauda ruficollis].
ACCESSION   XP_041329626
VERSION     XP_041329626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..549
                     /product="uncharacterized protein LOC121356851"
                     /calculated_mol_wt=60682
     Region          <311..>340
                     /region_name="DUF4657"
                     /note="Domain of unknown function (DUF4657); pfam15552"
                     /db_xref="CDD:464762"
     CDS             1..549
                     /gene="LOC121356851"
                     /coded_by="XM_041473692.1:201..1850"
                     /db_xref="GeneID:121356851"
ORIGIN      
        1 mfswhrsftl gapwrragkk sppaedkvvl thmkilsneg iqnpglipea padtactees
       61 hlpgasvppd clgspdaaaa aadpdcvdgp astdyvatlp dlstfeskcr lhrfskfese
      121 dsgvelpsga nspstptgse ksfvlhsrds fcdsgvlsts sspeidhqsm rtckeharkv
      181 slqdpeskkq adyysqeada vqdptasled fndpqeespd dhfhqddkqs pekgptaemd
      241 lsrestlstp gpieepktit dnlpenfgsm qdlqipehql kkyptsdsld eymdeccrls
      301 evnqsnskal gsglgylehi cqliekigql qehnlhlqkq vcslqkeqkm sqikeeyilq
      361 hcscgaasif lnsyqdmktn fagrsrphsl lvqtgnlsdl siipeigant eklsscngse
      421 rylesgksqp mvglrkssnn rnnkenefre vgsmvegqaf lskdpavrka ldvsknisge
      481 shawrrmrdl mrktrltnqn klglssaalk rscpqlyrpd imsselrkte rnsmivlgqn
      541 tknenlwpf
//
LOCUS       XP_041329639             257 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor expression-enhancing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041329639
VERSION     XP_041329639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="receptor expression-enhancing protein 3"
                     /calculated_mol_wt=29649
     Region          19..95
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..257
                     /gene="REEP3"
                     /coded_by="XM_041473705.1:82..855"
                     /db_xref="GeneID:121356857"
ORIGIN      
        1 mvswmisrav vlvfgmlypa yysykavktk nvkeyvrwmm ywivfalytv tetitdltvs
       61 wfplyyelki afviwllspy trgasliyrk flhpllsske reideyivqa kergyetmvn
      121 fgrqglnlaa taavtaavks qgaiteklrs fsmhdlttiq gdepvgqrpy qtlpeakkkt
      181 rastsesssy ktpleknpgd dktdeemegt ysedemfaqr glrrtqsmks vktikgrkei
      241 rygslkyrvk krpavyf
//
LOCUS       XP_041329654            1841 aa            linear   VRT 06-MAY-2021
DEFINITION  histone acetyltransferase KAT6B [Pyrgilauda ruficollis].
ACCESSION   XP_041329654
VERSION     XP_041329654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1841
                     /product="histone acetyltransferase KAT6B"
                     /calculated_mol_wt=205682
     Region          113..167
                     /region_name="H15"
                     /note="Domain in histone families 1 and 5; smart00526"
                     /db_xref="CDD:197772"
     Site            order(146,151..161)
                     /site_type="DNA binding"
                     /note="DNA-binding site [nucleotide binding]"
                     /db_xref="CDD:238028"
     Region          212..270
                     /region_name="PHD1_MORF"
                     /note="PHD finger 1 found in monocytic leukemia zinc
                     finger protein-related factor (MORF); cd15689"
                     /db_xref="CDD:277159"
     Site            order(215,217..218,220,237,242,244,249..251,264,266..268)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277159"
     Site            order(251,255,258..259,262,264..265,267,269)
                     /site_type="other"
                     /note="PHD2 interface [polypeptide binding]"
                     /db_xref="CDD:277159"
     Region          271..317
                     /region_name="PHD2_KAT6A_6B"
                     /note="PHD finger 2 found in monocytic leukemia
                     zinc-finger protein (MOZ) and its factor (MORF); cd15527"
                     /db_xref="CDD:277002"
     Site            order(271,276,289..293)
                     /site_type="other"
                     /note="PHD1 interface [polypeptide binding]"
                     /db_xref="CDD:277002"
     Site            order(283..289,292,307..310)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277002"
     Region          <532..807
                     /region_name="PLN00104"
                     /note="MYST -like histone acetyltransferase; Provisional"
                     /db_xref="CDD:215056"
     Region          <1066..>1335
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     CDS             1..1841
                     /gene="KAT6B"
                     /coded_by="XM_041473720.1:480..6005"
                     /db_xref="GeneID:121356862"
ORIGIN      
        1 mvklanplyt ewileaiqkv kkqkqrpsee richavcash gldkktvseq lelsvqdgsi
       61 lkvtnkglas ykdpdnpgrf scvkpgtipk svkgsrgacn elrnvdwnkl lrraieglqe
      121 pngsslknie kylrsqndla sifnnpafqq rlrlgakrav nngrllkdgp qyrvnygsle
      181 skgapkysst fpaslppvsl lphekdqpra dpipicsfcl gtkesnrekk peellscadc
      241 gssghpsclk fcpelttnvk alrwqcieck tcsacriqgk nadnmlfcds cdrgfhmecc
      301 dpplsrmpkg mwicqvcrpk kkgrkllhek aaqirrryak pigrpknklk qrmlsvtsde
      361 gsvnaftgrg spgrgqktkv cttpssghaa svkdsssrlp vtdptrpgat tkitttstyi
      421 sastlkvnkk tkglidgltk fftpspdgrr srgeiidfsk hyrprkkvsq kqsctslvla
      481 tdteiklsik qentdvfllg skdtvtqedl evfkqarels mekigckntg etggrypsvi
      541 efgkyeiqtw ysspypqeya rlpklylcef clkymkskni llrhsekcgw fhppaneiyr
      601 rndlsvfevd gnvskiycqn lcllaklfld hktlyydvep flfyvltknd ekgchlvgyf
      661 skeklcqqky nvscimimpq yqrqgfgrfl idfsyllsrr egqagspekp lsdlgrlsyl
      721 aywksviley lnchhekqis ikgmsratgm cphdiattlq qhsmidkred rfviirrekl
      781 isshmeklka nprinevdpe slrwtpllvs naavseeere aekeaerlme qascwekeeq
      841 eifstrtnsr qspakvqskn kylrspesva vvgergqcte qskesseedg gdenqqsspp
      901 rltkpqslam krkrpfilkk krgrkrrrin ssvttetise ttevlnepfd nsdeerpmpq
      961 leptcemdge dddlkpvirk afeyqpgqqk qeeeeqnkee kdthcyrrde nctdntedva
     1021 vleestkdnl eplkskqgwp kgvkrgpskw rqskerkpgf klnlytppet pmepdyqvlv
     1081 eeqkevaedk pcsvpavtee avkepaealp ppdnevkeve peplhppsep fekqendtmk
     1141 ageeersiee dginskdqek dkaeeafvqk eesvhlddqe eeeeedeeps hnedhdadde
     1201 ddshmgstev ekeelpgeaf kemletqqsf ldvnvqtgns nqeelmdcgv dlaadecasd
     1261 qkelatdsdp vpesdddhad nnqdqkagee lhsdfkgest etmeidsetv qavqsltqet
     1321 sehedtfqdc aetqeacrsl qnyahndqsp qmttlddcqq sdhsspvssv hshpsqsvrs
     1381 vnspnvaple nsyaqispdq saisvpslqn metspmmdvp svsdhsqqvv dsgfsdlgsi
     1441 esttenyenp ssydstmgss icgnnssqns csyssltssn ltqsscavtq qisningscs
     1501 mmqqaninsp ptcnvkspqg cvverppsgn qqlsqcsmaa nftppmqlte ipetsnanig
     1561 lyermgqsef gaghysqpsa tfslaklqql tntlmdhslp yshsaavtsy ansaslsapl
     1621 sntglvqlsq sphavpggpq aqatmtpppn ltpppmnlpp pllqrnmtss nigishtqrl
     1681 qtqmaskghv svrtkstplp paaaahqpqi ygrasqtvam qgpartltmq rgmnmsvnlm
     1741 papaynvnsv nmnmntlnam ngysmsqpmm nsgyhsnhgy mnqtpqypmq mqmgmmgtqp
     1801 yaqqpmqtap hsnmmytppg hhgymntgms kqslngsymr r
//
LOCUS       XP_041329667             217 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity phosphatase 29 [Pyrgilauda ruficollis].
ACCESSION   XP_041329667
VERSION     XP_041329667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="dual specificity phosphatase 29"
                     /calculated_mol_wt=24426
     Region          41..199
                     /region_name="DUPD1"
                     /note="dual specificity phosphatase and pro isomerase
                     domain containing 1; cd14575"
                     /db_xref="CDD:350423"
     CDS             1..217
                     /gene="DUSP29"
                     /coded_by="XM_041473733.1:93..746"
                     /db_xref="GeneID:121356869"
ORIGIN      
        1 mdkmssgswn agkknaytav kvdpdednct pgafelerll wkgcpkythv nevwpnlyig
       61 dektaldrys lekagfthil naahgqrnvd tgpqyynsmt veyhgveadd lptfnlsqff
      121 ysaskfidna lqderskvlv hcamgrsrsa tlvlaylmiy knmtvvdaie qvsrhrcilp
      181 nrgflkqlre ldialalqrr nsknslapae qqnstti
//
LOCUS       XP_041329689            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329689
VERSION     XP_041329689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473755.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=114554
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          183..>496
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <342..555
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          732..795
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(737,740,753,755,760,763,776,779)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1058
                     /gene="ZMIZ1"
                     /coded_by="XM_041473755.1:610..3786"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag
      361 mtpssmsgpp mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg
      421 nqqygpnsqf pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr
      481 pvpvanyphs pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lppppnakgk
      541 vhafspssip anhndelrlt fpvrdgvvle pfrlehnlav snhvfhlrpt vhqtlmwrsd
      601 lelqfkcyhh edrqmntnwp asvqvsvnat pltiergdnk tshkplhlkh vcqpgrntiq
      661 itvtacccsh lfvlqlvhrp svrsvlqgll kkrllpaehc itkikrnfss vaassgnatl
      721 ngedgveqta ikvslkcpit frriqlparg hdckhvqcfd lesylqlnce rgtwrcpvcn
      781 ktalleglev dqymwgilna iqnsefeevt idptcswrpv piksdihikd dpdgipskrf
      841 ktmspsqmim pnvmemiaal gpgpspypsl ppppggnnst eygnqgnsyq ghgnfdfphg
      901 npggtsmndf mhgpqlshpp dmpssmaald kplshpmqes iphpgstdqs htsmqqglhv
      961 phpssqsgqp lhhsgpptqq srqpppaass nhphsdltfn pssalegqag gqgapdmpep
     1021 sldllpeltn pdellsyldp pdlpsnsndd llslfenn
//
LOCUS       XP_041329696            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329696
VERSION     XP_041329696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=114554
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          183..>496
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <342..555
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          732..795
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(737,740,753,755,760,763,776,779)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1058
                     /gene="ZMIZ1"
                     /coded_by="XM_041473762.1:606..3782"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag
      361 mtpssmsgpp mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg
      421 nqqygpnsqf pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr
      481 pvpvanyphs pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lppppnakgk
      541 vhafspssip anhndelrlt fpvrdgvvle pfrlehnlav snhvfhlrpt vhqtlmwrsd
      601 lelqfkcyhh edrqmntnwp asvqvsvnat pltiergdnk tshkplhlkh vcqpgrntiq
      661 itvtacccsh lfvlqlvhrp svrsvlqgll kkrllpaehc itkikrnfss vaassgnatl
      721 ngedgveqta ikvslkcpit frriqlparg hdckhvqcfd lesylqlnce rgtwrcpvcn
      781 ktalleglev dqymwgilna iqnsefeevt idptcswrpv piksdihikd dpdgipskrf
      841 ktmspsqmim pnvmemiaal gpgpspypsl ppppggnnst eygnqgnsyq ghgnfdfphg
      901 npggtsmndf mhgpqlshpp dmpssmaald kplshpmqes iphpgstdqs htsmqqglhv
      961 phpssqsgqp lhhsgpptqq srqpppaass nhphsdltfn pssalegqag gqgapdmpep
     1021 sldllpeltn pdellsyldp pdlpsnsndd llslfenn
//
LOCUS       XP_041329702            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329702
VERSION     XP_041329702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=114554
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          183..>496
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <342..555
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          732..795
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(737,740,753,755,760,763,776,779)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1058
                     /gene="ZMIZ1"
                     /coded_by="XM_041473768.1:786..3962"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag
      361 mtpssmsgpp mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg
      421 nqqygpnsqf pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr
      481 pvpvanyphs pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lppppnakgk
      541 vhafspssip anhndelrlt fpvrdgvvle pfrlehnlav snhvfhlrpt vhqtlmwrsd
      601 lelqfkcyhh edrqmntnwp asvqvsvnat pltiergdnk tshkplhlkh vcqpgrntiq
      661 itvtacccsh lfvlqlvhrp svrsvlqgll kkrllpaehc itkikrnfss vaassgnatl
      721 ngedgveqta ikvslkcpit frriqlparg hdckhvqcfd lesylqlnce rgtwrcpvcn
      781 ktalleglev dqymwgilna iqnsefeevt idptcswrpv piksdihikd dpdgipskrf
      841 ktmspsqmim pnvmemiaal gpgpspypsl ppppggnnst eygnqgnsyq ghgnfdfphg
      901 npggtsmndf mhgpqlshpp dmpssmaald kplshpmqes iphpgstdqs htsmqqglhv
      961 phpssqsgqp lhhsgpptqq srqpppaass nhphsdltfn pssalegqag gqgapdmpep
     1021 sldllpeltn pdellsyldp pdlpsnsndd llslfenn
//
LOCUS       XP_041329711            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329711
VERSION     XP_041329711.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473777.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=114554
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          183..>496
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <342..555
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          732..795
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(737,740,753,755,760,763,776,779)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1058
                     /gene="ZMIZ1"
                     /coded_by="XM_041473777.1:529..3705"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag
      361 mtpssmsgpp mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg
      421 nqqygpnsqf pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr
      481 pvpvanyphs pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lppppnakgk
      541 vhafspssip anhndelrlt fpvrdgvvle pfrlehnlav snhvfhlrpt vhqtlmwrsd
      601 lelqfkcyhh edrqmntnwp asvqvsvnat pltiergdnk tshkplhlkh vcqpgrntiq
      661 itvtacccsh lfvlqlvhrp svrsvlqgll kkrllpaehc itkikrnfss vaassgnatl
      721 ngedgveqta ikvslkcpit frriqlparg hdckhvqcfd lesylqlnce rgtwrcpvcn
      781 ktalleglev dqymwgilna iqnsefeevt idptcswrpv piksdihikd dpdgipskrf
      841 ktmspsqmim pnvmemiaal gpgpspypsl ppppggnnst eygnqgnsyq ghgnfdfphg
      901 npggtsmndf mhgpqlshpp dmpssmaald kplshpmqes iphpgstdqs htsmqqglhv
      961 phpssqsgqp lhhsgpptqq srqpppaass nhphsdltfn pssalegqag gqgapdmpep
     1021 sldllpeltn pdellsyldp pdlpsnsndd llslfenn
//
LOCUS       XP_041329721            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329721
VERSION     XP_041329721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=114554
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          183..>496
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <342..555
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          732..795
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(737,740,753,755,760,763,776,779)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1058
                     /gene="ZMIZ1"
                     /coded_by="XM_041473787.1:476..3652"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag
      361 mtpssmsgpp mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg
      421 nqqygpnsqf pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr
      481 pvpvanyphs pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lppppnakgk
      541 vhafspssip anhndelrlt fpvrdgvvle pfrlehnlav snhvfhlrpt vhqtlmwrsd
      601 lelqfkcyhh edrqmntnwp asvqvsvnat pltiergdnk tshkplhlkh vcqpgrntiq
      661 itvtacccsh lfvlqlvhrp svrsvlqgll kkrllpaehc itkikrnfss vaassgnatl
      721 ngedgveqta ikvslkcpit frriqlparg hdckhvqcfd lesylqlnce rgtwrcpvcn
      781 ktalleglev dqymwgilna iqnsefeevt idptcswrpv piksdihikd dpdgipskrf
      841 ktmspsqmim pnvmemiaal gpgpspypsl ppppggnnst eygnqgnsyq ghgnfdfphg
      901 npggtsmndf mhgpqlshpp dmpssmaald kplshpmqes iphpgstdqs htsmqqglhv
      961 phpssqsgqp lhhsgpptqq srqpppaass nhphsdltfn pssalegqag gqgapdmpep
     1021 sldllpeltn pdellsyldp pdlpsnsndd llslfenn
//
LOCUS       XP_041329728            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329728
VERSION     XP_041329728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=114554
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          183..>496
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <342..555
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          732..795
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(737,740,753,755,760,763,776,779)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1058
                     /gene="ZMIZ1"
                     /coded_by="XM_041473794.1:151..3327"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag
      361 mtpssmsgpp mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg
      421 nqqygpnsqf pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr
      481 pvpvanyphs pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lppppnakgk
      541 vhafspssip anhndelrlt fpvrdgvvle pfrlehnlav snhvfhlrpt vhqtlmwrsd
      601 lelqfkcyhh edrqmntnwp asvqvsvnat pltiergdnk tshkplhlkh vcqpgrntiq
      661 itvtacccsh lfvlqlvhrp svrsvlqgll kkrllpaehc itkikrnfss vaassgnatl
      721 ngedgveqta ikvslkcpit frriqlparg hdckhvqcfd lesylqlnce rgtwrcpvcn
      781 ktalleglev dqymwgilna iqnsefeevt idptcswrpv piksdihikd dpdgipskrf
      841 ktmspsqmim pnvmemiaal gpgpspypsl ppppggnnst eygnqgnsyq ghgnfdfphg
      901 npggtsmndf mhgpqlshpp dmpssmaald kplshpmqes iphpgstdqs htsmqqglhv
      961 phpssqsgqp lhhsgpptqq srqpppaass nhphsdltfn pssalegqag gqgapdmpep
     1021 sldllpeltn pdellsyldp pdlpsnsndd llslfenn
//
LOCUS       XP_041329738            1052 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329738
VERSION     XP_041329738.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473804.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1052
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1052
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=113903
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          <336..549
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          726..789
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(731,734,747,749,754,757,770,773)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1052
                     /gene="ZMIZ1"
                     /coded_by="XM_041473804.1:610..3768"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpm gptqaynnqf mnqpgprgpa smpgnmnpas mgagmtpssm
      361 sgppmgmnqp rppgmspfst hgqrmpqqay pgprpqslpi qgikrpypge pnygnqqygp
      421 nsqfpnqpgq yptpnpprpl tspnypgqrm psqqntgqyp pptvnmgqyy kpsrpvpvan
      481 yphspvpgnp tppmtpgsni ppylspnqdv kppfppdikp ninalppppn akgkvhafsp
      541 ssipanhnde lrltfpvrdg vvlepfrleh nlavsnhvfh lrptvhqtlm wrsdlelqfk
      601 cyhhedrqmn tnwpasvqvs vnatpltier gdnktshkpl hlkhvcqpgr ntiqitvtac
      661 ccshlfvlql vhrpsvrsvl qgllkkrllp aehcitkikr nfssvaassg natlngedgv
      721 eqtaikvslk cpitfrriql parghdckhv qcfdlesylq lncergtwrc pvcnktalle
      781 glevdqymwg ilnaiqnsef eevtidptcs wrpvpiksdi hikddpdgip skrfktmsps
      841 qmimpnvmem iaalgpgpsp ypslppppgg nnsteygnqg nsyqghgnfd fphgnpggts
      901 mndfmhgpql shppdmpssm aaldkplshp mqesiphpgs tdqshtsmqq glhvphpssq
      961 sgqplhhsgp ptqqsrqppp aassnhphsd ltfnpssale gqaggqgapd mpepsldllp
     1021 eltnpdells yldppdlpsn snddllslfe nn
//
LOCUS       XP_041329749            1043 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329749
VERSION     XP_041329749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1043
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X3"
                     /calculated_mol_wt=113063
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          183..>496
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <342..533
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          717..780
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(722,725,738,740,745,748,761,764)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438471"
     CDS             1..1043
                     /gene="ZMIZ1"
                     /coded_by="XM_041473815.1:609..3740"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag
      361 mtpssmsgpp mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg
      421 nqqygpnsqf pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr
      481 pvpvanyphs pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lpppptnhnd
      541 elrltfpvrd gvvlepfrle hnlavsnhvf hlrptvhqtl mwrsdlelqf kcyhhedrqm
      601 ntnwpasvqv svnatpltie rgdnktshkp lhlkhvcqpg rntiqitvta cccshlfvlq
      661 lvhrpsvrsv lqgllkkrll paehcitkik rnfssvaass gnatlngedg veqtaikvsl
      721 kcpitfrriq lparghdckh vqcfdlesyl qlncergtwr cpvcnktall eglevdqymw
      781 gilnaiqnse feevtidptc swrpvpiksd ihikddpdgi pskrfktmsp sqmimpnvme
      841 miaalgpgps pypslppppg gnnsteygnq gnsyqghgnf dfphgnpggt smndfmhgpq
      901 lshppdmpss maaldkplsh pmqesiphpg stdqshtsmq qglhvphpss qsgqplhhsg
      961 pptqqsrqpp paassnhphs dltfnpssal egqaggqgap dmpepsldll peltnpdell
     1021 syldppdlps nsnddllslf enn
//
LOCUS       XP_041329754             988 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329754
VERSION     XP_041329754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473820.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..988
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X4"
                     /calculated_mol_wt=106568
     Region          113..>426
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <272..485
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          662..725
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(667,670,683,685,690,693,706,709)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..988
                     /gene="ZMIZ1"
                     /coded_by="XM_041473820.1:6..2972"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mgspelavaw ervlsweqca askallsswc eelgrllllr hqksrqndpp gklpmqppmn
       61 smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq vlgnpmanan
      121 npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg rpnypgsggf
      181 ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat atvaalqetq
      241 nkdmnqygpv cssfqmgptq aynnqfmnqp gprgpasmpg nmnpasmgag mtpssmsgpp
      301 mgmnqprppg mspfsthgqr mpqqaypgpr pqslpiqgik rpypgepnyg nqqygpnsqf
      361 pnqpgqyptp npprpltspn ypgqrmpsqq ntgqyppptv nmgqyykpsr pvpvanyphs
      421 pvpgnptppm tpgsnippyl spnqdvkppf ppdikpnina lppppnakgk vhafspssip
      481 anhndelrlt fpvrdgvvle pfrlehnlav snhvfhlrpt vhqtlmwrsd lelqfkcyhh
      541 edrqmntnwp asvqvsvnat pltiergdnk tshkplhlkh vcqpgrntiq itvtacccsh
      601 lfvlqlvhrp svrsvlqgll kkrllpaehc itkikrnfss vaassgnatl ngedgveqta
      661 ikvslkcpit frriqlparg hdckhvqcfd lesylqlnce rgtwrcpvcn ktalleglev
      721 dqymwgilna iqnsefeevt idptcswrpv piksdihikd dpdgipskrf ktmspsqmim
      781 pnvmemiaal gpgpspypsl ppppggnnst eygnqgnsyq ghgnfdfphg npggtsmndf
      841 mhgpqlshpp dmpssmaald kplshpmqes iphpgstdqs htsmqqglhv phpssqsgqp
      901 lhhsgpptqq srqpppaass nhphsdltfn pssalegqag gqgapdmpep sldllpeltn
      961 pdellsyldp pdlpsnsndd llslfenn
//
LOCUS       XP_041329755             934 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329755
VERSION     XP_041329755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..934
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X5"
                     /calculated_mol_wt=100499
     Region          59..>372
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <218..431
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          608..671
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(613,616,629,631,636,639,652,655)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..934
                     /gene="ZMIZ1"
                     /coded_by="XM_041473821.1:252..3056"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mqppmnsmss mkptlshsdg sfpydsvpwq qntnqppgsl svvttvwgvt ntsqsqvlgn
       61 pmanannpmn pagnpmasgm ttsnpginsp qfagqqqqfs akagstqpyi qqgmygrpny
      121 pgsggfggsy pggpntpagm gipphtrppa dftqpaaaaa aaavaaaaat atatatatva
      181 alqetqnkdm nqygpvcssf qmgptqaynn qfmnqpgprg pasmpgnmnp asmgagmtps
      241 smsgppmgmn qprppgmspf sthgqrmpqq aypgprpqsl piqgikrpyp gepnygnqqy
      301 gpnsqfpnqp gqyptpnppr pltspnypgq rmpsqqntgq yppptvnmgq yykpsrpvpv
      361 anyphspvpg nptppmtpgs nippylspnq dvkppfppdi kpninalppp pnakgkvhaf
      421 spssipanhn delrltfpvr dgvvlepfrl ehnlavsnhv fhlrptvhqt lmwrsdlelq
      481 fkcyhhedrq mntnwpasvq vsvnatplti ergdnktshk plhlkhvcqp grntiqitvt
      541 acccshlfvl qlvhrpsvrs vlqgllkkrl lpaehcitki krnfssvaas sgnatlnged
      601 gveqtaikvs lkcpitfrri qlparghdck hvqcfdlesy lqlncergtw rcpvcnktal
      661 leglevdqym wgilnaiqns efeevtidpt cswrpvpiks dihikddpdg ipskrfktms
      721 psqmimpnvm emiaalgpgp spypslpppp ggnnsteygn qgnsyqghgn fdfphgnpgg
      781 tsmndfmhgp qlshppdmps smaaldkpls hpmqesiphp gstdqshtsm qqglhvphps
      841 sqsgqplhhs gpptqqsrqp ppaassnhph sdltfnpssa legqaggqga pdmpepsldl
      901 lpeltnpdel lsyldppdlp snsnddllsl fenn
//
LOCUS       XP_041329759             934 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329759
VERSION     XP_041329759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..934
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X5"
                     /calculated_mol_wt=100499
     Region          59..>372
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          <218..431
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          608..671
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(613,616,629,631,636,639,652,655)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..934
                     /gene="ZMIZ1"
                     /coded_by="XM_041473825.1:219..3023"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mqppmnsmss mkptlshsdg sfpydsvpwq qntnqppgsl svvttvwgvt ntsqsqvlgn
       61 pmanannpmn pagnpmasgm ttsnpginsp qfagqqqqfs akagstqpyi qqgmygrpny
      121 pgsggfggsy pggpntpagm gipphtrppa dftqpaaaaa aaavaaaaat atatatatva
      181 alqetqnkdm nqygpvcssf qmgptqaynn qfmnqpgprg pasmpgnmnp asmgagmtps
      241 smsgppmgmn qprppgmspf sthgqrmpqq aypgprpqsl piqgikrpyp gepnygnqqy
      301 gpnsqfpnqp gqyptpnppr pltspnypgq rmpsqqntgq yppptvnmgq yykpsrpvpv
      361 anyphspvpg nptppmtpgs nippylspnq dvkppfppdi kpninalppp pnakgkvhaf
      421 spssipanhn delrltfpvr dgvvlepfrl ehnlavsnhv fhlrptvhqt lmwrsdlelq
      481 fkcyhhedrq mntnwpasvq vsvnatplti ergdnktshk plhlkhvcqp grntiqitvt
      541 acccshlfvl qlvhrpsvrs vlqgllkkrl lpaehcitki krnfssvaas sgnatlnged
      601 gveqtaikvs lkcpitfrri qlparghdck hvqcfdlesy lqlncergtw rcpvcnktal
      661 leglevdqym wgilnaiqns efeevtidpt cswrpvpiks dihikddpdg ipskrfktms
      721 psqmimpnvm emiaalgpgp spypslpppp ggnnsteygn qgnsyqghgn fdfphgnpgg
      781 tsmndfmhgp qlshppdmps smaaldkpls hpmqesiphp gstdqshtsm qqglhvphps
      841 sqsgqplhhs gpptqqsrqp ppaassnhph sdltfnpssa legqaggqga pdmpepsldl
      901 lpeltnpdel lsyldppdlp snsnddllsl fenn
//
LOCUS       XP_041329768            1037 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 1 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329768
VERSION     XP_041329768.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473834.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1037
                     /product="zinc finger MIZ domain-containing protein 1
                     isoform X6"
                     /calculated_mol_wt=112411
     Region          8..100
                     /region_name="Zmiz1_N"
                     /note="Zmiz1 N-terminal tetratricopeptide repeat domain;
                     pfam18028"
                     /db_xref="CDD:375500"
     Region          <336..527
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          711..774
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(716,719,732,734,739,742,755,758)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..1037
                     /gene="ZMIZ1"
                     /coded_by="XM_041473834.1:609..3722"
                     /db_xref="GeneID:121356878"
ORIGIN      
        1 mnsmdrhiqq tndrlqcikq hlqnpanfhn aatelldwcg dprafqrpfe qslmgcltvv
       61 srvaaqqgfd ldlgyrllav caanrdkftp ksaallsswc eelgrllllr hqksrqndpp
      121 gklpmqppmn smssmkptls hsdgsfpyds vpwqqntnqp pgslsvvttv wgvtntsqsq
      181 vlgnpmanan npmnpagnpm asgmttsnpg inspqfagqq qqfsakagst qpyiqqgmyg
      241 rpnypgsggf ggsypggpnt pagmgippht rppadftqpa aaaaaaavaa aaatatatat
      301 atvaalqetq nkdmnqygpm gptqaynnqf mnqpgprgpa smpgnmnpas mgagmtpssm
      361 sgppmgmnqp rppgmspfst hgqrmpqqay pgprpqslpi qgikrpypge pnygnqqygp
      421 nsqfpnqpgq yptpnpprpl tspnypgqrm psqqntgqyp pptvnmgqyy kpsrpvpvan
      481 yphspvpgnp tppmtpgsni ppylspnqdv kppfppdikp ninalppppt nhndelrltf
      541 pvrdgvvlep frlehnlavs nhvfhlrptv hqtlmwrsdl elqfkcyhhe drqmntnwpa
      601 svqvsvnatp ltiergdnkt shkplhlkhv cqpgrntiqi tvtacccshl fvlqlvhrps
      661 vrsvlqgllk krllpaehci tkikrnfssv aassgnatln gedgveqtai kvslkcpitf
      721 rriqlpargh dckhvqcfdl esylqlncer gtwrcpvcnk talleglevd qymwgilnai
      781 qnsefeevti dptcswrpvp iksdihikdd pdgipskrfk tmspsqmimp nvmemiaalg
      841 pgpspypslp pppggnnste ygnqgnsyqg hgnfdfphgn pggtsmndfm hgpqlshppd
      901 mpssmaaldk plshpmqesi phpgstdqsh tsmqqglhvp hpssqsgqpl hhsgpptqqs
      961 rqpppaassn hphsdltfnp ssalegqagg qgapdmpeps ldllpeltnp dellsyldpp
     1021 dlpsnsnddl lslfenn
//
LOCUS       XP_041329779             414 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin synthase-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329779
VERSION     XP_041329779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..414
                     /product="sphingomyelin synthase-related protein 1"
                     /calculated_mol_wt=47771
     Region          9..78
                     /region_name="SAM_SGMS1-like"
                     /note="SAM domain of sphingomyelin synthase related
                     subfamily; cd09515"
                     /db_xref="CDD:188914"
     Region          291..364
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..414
                     /gene="SAMD8"
                     /coded_by="XM_041473845.1:338..1582"
                     /db_xref="GeneID:121356943"
ORIGIN      
        1 magnnqlcir rwttknvakw lkeegfceyv dllcnrhrld gitlltltey dlrsppleik
       61 ilgdikrlml sirklqkqhi dvleelgyts dshagtvcpa gspqgadwfc ngevprdydg
      121 pitdlngdqy qyangknkha trrldpeywk tvlscvyvfi vfgftsfvmv ivhervpdmq
      181 typplpdifl dsvpripwaf amtevcgvil cyiwllvlll hkhrsillrr lcslmgtvfl
      241 lrcitmfvts lsvpgqhlqc tgklygnvwa klqrafaiws gfgmtltgvh tcgdymfsgh
      301 tvvltmlnff vteytprswn flhtlswvln lfgiffilaa hehysidvfi afyittrlfl
      361 yyhtlantra yhqsrrariw fpmfsffecn vngtvpneyc wpfskptvlk rlig
//
LOCUS       XP_041329786             414 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin synthase-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041329786
VERSION     XP_041329786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..414
                     /product="sphingomyelin synthase-related protein 1"
                     /calculated_mol_wt=47771
     Region          9..78
                     /region_name="SAM_SGMS1-like"
                     /note="SAM domain of sphingomyelin synthase related
                     subfamily; cd09515"
                     /db_xref="CDD:188914"
     Region          291..364
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..414
                     /gene="SAMD8"
                     /coded_by="XM_041473852.1:196..1440"
                     /db_xref="GeneID:121356943"
ORIGIN      
        1 magnnqlcir rwttknvakw lkeegfceyv dllcnrhrld gitlltltey dlrsppleik
       61 ilgdikrlml sirklqkqhi dvleelgyts dshagtvcpa gspqgadwfc ngevprdydg
      121 pitdlngdqy qyangknkha trrldpeywk tvlscvyvfi vfgftsfvmv ivhervpdmq
      181 typplpdifl dsvpripwaf amtevcgvil cyiwllvlll hkhrsillrr lcslmgtvfl
      241 lrcitmfvts lsvpgqhlqc tgklygnvwa klqrafaiws gfgmtltgvh tcgdymfsgh
      301 tvvltmlnff vteytprswn flhtlswvln lfgiffilaa hehysidvfi afyittrlfl
      361 yyhtlantra yhqsrrariw fpmfsffecn vngtvpneyc wpfskptvlk rlig
//
LOCUS       XP_041329798            1745 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329798
VERSION     XP_041329798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1745
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X1"
                     /calculated_mol_wt=193783
     Region          32..349
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(35,42,302,320)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..1745
                     /gene="USP54"
                     /coded_by="XM_041473864.1:1080..6317"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mswkrnyfsv grgnvqgmft prnttsiaps kglsnepgqn scflnsalqv lwhldifrrs
       61 frqitthkcm gdscifcalk gifnqfqcss ekvlpsdalr talaktfqde qrfqlgimdd
      121 aaecfenllm rihfhiadet kedictaphc vshqkfamtl feqcvctscg atsdplpfiq
      181 mvhyisttsl cnqaicmler rekptpdmfg ellqnastmg dlrncpsncg ekirirrvlm
      241 nspqiitigl vwdsdhsdla edvihslgtc lklgdlffrv tddrakhsel ylvgmicyyg
      301 khystfffqt kirkwmyfdd ahvkeigpkw kdvvtkcikg hyqpllllya dprgtpvstq
      361 dlppqvdlqq ynrtcydsed sgrepsissd trtdsstdsy pykqahhesv vshfssdsqg
      421 tviynvenda asqssrdtgh ltdsecnqrh vskkgsladr krsssrsrrk gdeaqssgyh
      481 segetlkekq aprtapkpss stsrlrefke tvsnmihsrp qqisqtiqns prggnsvdqa
      541 etrpskslsa htrdwevest ssesksssss ryrptwrpkr eslnidsifs kdkrkhcgyt
      601 qlspfseeag kelsenevke raahetrssq snvrykrgvl grgtqhhvvd qhphliqrme
      661 sgyesserns nspvsldmpl sesssthrdv hmkraggfvp awrnipkshs ssilevesas
      721 sigswtnsph tmgnggdifv plkseldelq eevarraheq elrrkrekem eaamgfnprp
      781 srfmdldelq nqgrsdgfek smqeadsife eslnqeqkgd caaalalcne aisklrlamh
      841 dasasthsra lvdkklqisi rkarslqdrm qhqqppqplp ppachppqgg tmaqstseqt
      901 gplqvllsqe vplepnkeve fgsssffhpp aschelhssl ypessslpps ecnpsnrisp
      961 nfqsasadih dqvpsfpyrq glaessarte neahksgefa dttgtglkdy rdccssskle
     1021 evhnvpvltp qyqskantvn sgslptlfsy phppqaaspe kdsqhspcsk lasspvrpsi
     1081 dlvgayhamt patssptqqc ssdplqknky yransqeilf psqgengtad gckseafstk
     1141 ghvrslaeqf qkmhavsqrk gthekdwita vcqdekspkl tqkpfinhss sgyrqlihqn
     1201 qenknqssek lhstvdirdg vvslkgfsaq hvasvsfcsh seelcrrggq niadpvpyve
     1261 rhshdggmke vddgaassmv asmpvdrwvn nvtryyssqk ankntewlpv pgrspllsdq
     1321 ravgddlsri pvhlhpewnq dteqelsele slyqtslqas qatrpflgrq dsarypfdqs
     1381 vsvnpgvrkl patagmglsk tptaeiersl cgssvssvsk vtytrehsre peeeeiysae
     1441 nfrriarsls gtvisnreet lvsshsfeap nmrkmpvdts hrsssstslp fphdppvfpf
     1501 dpqhnpnqvq hpphdvlmps mvgmarklsg dqkniiqkll vvpdrgeafq gedypgvals
     1561 ygslpcvpkg tlsqgqkplv nlhlgggass vsgrllnpaa qtatlpdkrt mlwgkhagqp
     1621 skslqegflq qpsqhpmhes haiscrlpas tdystlripr epswdpgasq gcpvppscvk
     1681 apgprrvdmp peedwrdssy tpqpgrrrml pvhvvdgtfs saskahrnml araaaatgtm
     1741 qnngw
//
LOCUS       XP_041329806            1745 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329806
VERSION     XP_041329806.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473872.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1745
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X1"
                     /calculated_mol_wt=193783
     Region          32..349
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(35,42,302,320)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..1745
                     /gene="USP54"
                     /coded_by="XM_041473872.1:816..6053"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mswkrnyfsv grgnvqgmft prnttsiaps kglsnepgqn scflnsalqv lwhldifrrs
       61 frqitthkcm gdscifcalk gifnqfqcss ekvlpsdalr talaktfqde qrfqlgimdd
      121 aaecfenllm rihfhiadet kedictaphc vshqkfamtl feqcvctscg atsdplpfiq
      181 mvhyisttsl cnqaicmler rekptpdmfg ellqnastmg dlrncpsncg ekirirrvlm
      241 nspqiitigl vwdsdhsdla edvihslgtc lklgdlffrv tddrakhsel ylvgmicyyg
      301 khystfffqt kirkwmyfdd ahvkeigpkw kdvvtkcikg hyqpllllya dprgtpvstq
      361 dlppqvdlqq ynrtcydsed sgrepsissd trtdsstdsy pykqahhesv vshfssdsqg
      421 tviynvenda asqssrdtgh ltdsecnqrh vskkgsladr krsssrsrrk gdeaqssgyh
      481 segetlkekq aprtapkpss stsrlrefke tvsnmihsrp qqisqtiqns prggnsvdqa
      541 etrpskslsa htrdwevest ssesksssss ryrptwrpkr eslnidsifs kdkrkhcgyt
      601 qlspfseeag kelsenevke raahetrssq snvrykrgvl grgtqhhvvd qhphliqrme
      661 sgyesserns nspvsldmpl sesssthrdv hmkraggfvp awrnipkshs ssilevesas
      721 sigswtnsph tmgnggdifv plkseldelq eevarraheq elrrkrekem eaamgfnprp
      781 srfmdldelq nqgrsdgfek smqeadsife eslnqeqkgd caaalalcne aisklrlamh
      841 dasasthsra lvdkklqisi rkarslqdrm qhqqppqplp ppachppqgg tmaqstseqt
      901 gplqvllsqe vplepnkeve fgsssffhpp aschelhssl ypessslpps ecnpsnrisp
      961 nfqsasadih dqvpsfpyrq glaessarte neahksgefa dttgtglkdy rdccssskle
     1021 evhnvpvltp qyqskantvn sgslptlfsy phppqaaspe kdsqhspcsk lasspvrpsi
     1081 dlvgayhamt patssptqqc ssdplqknky yransqeilf psqgengtad gckseafstk
     1141 ghvrslaeqf qkmhavsqrk gthekdwita vcqdekspkl tqkpfinhss sgyrqlihqn
     1201 qenknqssek lhstvdirdg vvslkgfsaq hvasvsfcsh seelcrrggq niadpvpyve
     1261 rhshdggmke vddgaassmv asmpvdrwvn nvtryyssqk ankntewlpv pgrspllsdq
     1321 ravgddlsri pvhlhpewnq dteqelsele slyqtslqas qatrpflgrq dsarypfdqs
     1381 vsvnpgvrkl patagmglsk tptaeiersl cgssvssvsk vtytrehsre peeeeiysae
     1441 nfrriarsls gtvisnreet lvsshsfeap nmrkmpvdts hrsssstslp fphdppvfpf
     1501 dpqhnpnqvq hpphdvlmps mvgmarklsg dqkniiqkll vvpdrgeafq gedypgvals
     1561 ygslpcvpkg tlsqgqkplv nlhlgggass vsgrllnpaa qtatlpdkrt mlwgkhagqp
     1621 skslqegflq qpsqhpmhes haiscrlpas tdystlripr epswdpgasq gcpvppscvk
     1681 apgprrvdmp peedwrdssy tpqpgrrrml pvhvvdgtfs saskahrnml araaaatgtm
     1741 qnngw
//
LOCUS       XP_041329814            1705 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329814
VERSION     XP_041329814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1705
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X2"
                     /calculated_mol_wt=189478
     Region          32..349
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(35,42,302,320)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..1705
                     /gene="USP54"
                     /coded_by="XM_041473880.1:1080..6197"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mswkrnyfsv grgnvqgmft prnttsiaps kglsnepgqn scflnsalqv lwhldifrrs
       61 frqitthkcm gdscifcalk gifnqfqcss ekvlpsdalr talaktfqde qrfqlgimdd
      121 aaecfenllm rihfhiadet kedictaphc vshqkfamtl feqcvctscg atsdplpfiq
      181 mvhyisttsl cnqaicmler rekptpdmfg ellqnastmg dlrncpsncg ekirirrvlm
      241 nspqiitigl vwdsdhsdla edvihslgtc lklgdlffrv tddrakhsel ylvgmicyyg
      301 khystfffqt kirkwmyfdd ahvkeigpkw kdvvtkcikg hyqpllllya dprgtpvstq
      361 dlppqvdlqq ynrtcydsed sgrepsissd trtdsstdsy pykqahhesv vshfssdsqg
      421 tviynvenda asqssrdtgh ltdsecnqrh vskkgsladr krsssrsrrk gdeaqssgyh
      481 segetlkekq aprtapkpss stsrlrefke tvsnmihsrp qqisqtiqns prggnsvdqa
      541 etrpskslsa htrdwevest ssesksssss ryrptwrpkr eslnidsifs kdkrkhcgyt
      601 qlspfseeag kelsenevke raahetrssq snvrykrgvl grgtqhhvvd qhphliqrme
      661 sgyesserns nspvsldmpl sesssthrdv hmkraggfvp awrnipkshs ssilevesas
      721 sigswtnsph tmgnggdifv plkseldelq eevarraheq elrrkrekem eaamgfnprp
      781 srfmdldelq nqaklrlamh dasasthsra lvdkklqisi rkarslqdrm qhqqppqplp
      841 ppachppqgg tmaqstseqt gplqvllsqe vplepnkeve fgsssffhpp aschelhssl
      901 ypessslpps ecnpsnrisp nfqsasadih dqvpsfpyrq glaessarte neahksgefa
      961 dttgtglkdy rdccssskle evhnvpvltp qyqskantvn sgslptlfsy phppqaaspe
     1021 kdsqhspcsk lasspvrpsi dlvgayhamt patssptqqc ssdplqknky yransqeilf
     1081 psqgengtad gckseafstk ghvrslaeqf qkmhavsqrk gthekdwita vcqdekspkl
     1141 tqkpfinhss sgyrqlihqn qenknqssek lhstvdirdg vvslkgfsaq hvasvsfcsh
     1201 seelcrrggq niadpvpyve rhshdggmke vddgaassmv asmpvdrwvn nvtryyssqk
     1261 ankntewlpv pgrspllsdq ravgddlsri pvhlhpewnq dteqelsele slyqtslqas
     1321 qatrpflgrq dsarypfdqs vsvnpgvrkl patagmglsk tptaeiersl cgssvssvsk
     1381 vtytrehsre peeeeiysae nfrriarsls gtvisnreet lvsshsfeap nmrkmpvdts
     1441 hrsssstslp fphdppvfpf dpqhnpnqvq hpphdvlmps mvgmarklsg dqkniiqkll
     1501 vvpdrgeafq gedypgvals ygslpcvpkg tlsqgqkplv nlhlgggass vsgrllnpaa
     1561 qtatlpdkrt mlwgkhagqp skslqegflq qpsqhpmhes haiscrlpas tdystlripr
     1621 epswdpgasq gcpvppscvk apgprrvdmp peedwrdssy tpqpgrrrml pvhvvdgtfs
     1681 saskahrnml araaaatgtm qnngw
//
LOCUS       XP_041329823            1676 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329823
VERSION     XP_041329823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1676
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X3"
                     /calculated_mol_wt=185882
     Region          1..280
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     CDS             1..1676
                     /gene="USP54"
                     /coded_by="XM_041473889.1:440..5470"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mgdscifcal kgifnqfqcs sekvlpsdal rtalaktfqd eqrfqlgimd daaecfenll
       61 mrihfhiade tkedictaph cvshqkfamt lfeqcvctsc gatsdplpfi qmvhyistts
      121 lcnqaicmle rrekptpdmf gellqnastm gdlrncpsnc gekirirrvl mnspqiitig
      181 lvwdsdhsdl aedvihslgt clklgdlffr vtddrakhse lylvgmicyy gkhystfffq
      241 tkirkwmyfd dahvkeigpk wkdvvtkcik ghyqplllly adprgtpvst qdlppqvdlq
      301 qynrtcydse dsgrepsiss dtrtdsstds ypykqahhes vvshfssdsq gtviynvend
      361 aasqssrdtg hltdsecnqr hvskkgslad rkrsssrsrr kgdeaqssgy hsegetlkek
      421 qaprtapkps sstsrlrefk etvsnmihsr pqqisqtiqn sprggnsvdq aetrpsksls
      481 ahtrdweves tsseskssss sryrptwrpk reslnidsif skdkrkhcgy tqlspfseea
      541 gkelsenevk eraahetrss qsnvrykrgv lgrgtqhhvv dqhphliqrm esgyessern
      601 snspvsldmp lsesssthrd vhmkraggfv pawrnipksh sssilevesa ssigswtnsp
      661 htmgnggdif vplkseldel qeevarrahe qelrrkreke meaamgfnpr psrfmdldel
      721 qnqgrsdgfe ksmqeadsif eeslnqeqkg dcaaalalcn eaisklrlam hdasasthsr
      781 alvdkklqis irkarslqdr mqhqqppqpl pppachppqg gtmaqstseq tgplqvllsq
      841 evplepnkev efgsssffhp paschelhss lypessslpp secnpsnris pnfqsasadi
      901 hdqvpsfpyr qglaessart eneahksgef adttgtglkd yrdccssskl eevhnvpvlt
      961 pqyqskantv nsgslptlfs yphppqaasp ekdsqhspcs klasspvrps idlvgayham
     1021 tpatssptqq cssdplqknk yyransqeil fpsqgengta dgckseafst kghvrslaeq
     1081 fqkmhavsqr kgthekdwit avcqdekspk ltqkpfinhs ssgyrqlihq nqenknqsse
     1141 klhstvdird gvvslkgfsa qhvasvsfcs hseelcrrgg qniadpvpyv erhshdggmk
     1201 evddgaassm vasmpvdrwv nnvtryyssq kankntewlp vpgrspllsd qravgddlsr
     1261 ipvhlhpewn qdteqelsel eslyqtslqa sqatrpflgr qdsarypfdq svsvnpgvrk
     1321 lpatagmgls ktptaeiers lcgssvssvs kvtytrehsr epeeeeiysa enfrriarsl
     1381 sgtvisnree tlvsshsfea pnmrkmpvdt shrsssstsl pfphdppvfp fdpqhnpnqv
     1441 qhpphdvlmp smvgmarkls gdqkniiqkl lvvpdrgeaf qgedypgval sygslpcvpk
     1501 gtlsqgqkpl vnlhlgggas svsgrllnpa aqtatlpdkr tmlwgkhagq pskslqegfl
     1561 qqpsqhpmhe shaiscrlpa stdystlrip repswdpgas qgcpvppscv kapgprrvdm
     1621 ppeedwrdss ytpqpgrrrm lpvhvvdgtf ssaskahrnm laraaaatgt mqnngw
//
LOCUS       XP_041329831            1676 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329831
VERSION     XP_041329831.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473897.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1676
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X4"
                     /calculated_mol_wt=186053
     Region          13..280
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     CDS             1..1676
                     /gene="USP54"
                     /coded_by="XM_041473897.1:140..5170"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mrkspirvwg egifnqfqcs sekvlpsdal rtalaktfqd eqrfqlgimd daaecfenll
       61 mrihfhiade tkedictaph cvshqkfamt lfeqcvctsc gatsdplpfi qmvhyistts
      121 lcnqaicmle rrekptpdmf gellqnastm gdlrncpsnc gekirirrvl mnspqiitig
      181 lvwdsdhsdl aedvihslgt clklgdlffr vtddrakhse lylvgmicyy gkhystfffq
      241 tkirkwmyfd dahvkeigpk wkdvvtkcik ghyqplllly adprgtpvst qdlppqvdlq
      301 qynrtcydse dsgrepsiss dtrtdsstds ypykqahhes vvshfssdsq gtviynvend
      361 aasqssrdtg hltdsecnqr hvskkgslad rkrsssrsrr kgdeaqssgy hsegetlkek
      421 qaprtapkps sstsrlrefk etvsnmihsr pqqisqtiqn sprggnsvdq aetrpsksls
      481 ahtrdweves tsseskssss sryrptwrpk reslnidsif skdkrkhcgy tqlspfseea
      541 gkelsenevk eraahetrss qsnvrykrgv lgrgtqhhvv dqhphliqrm esgyessern
      601 snspvsldmp lsesssthrd vhmkraggfv pawrnipksh sssilevesa ssigswtnsp
      661 htmgnggdif vplkseldel qeevarrahe qelrrkreke meaamgfnpr psrfmdldel
      721 qnqgrsdgfe ksmqeadsif eeslnqeqkg dcaaalalcn eaisklrlam hdasasthsr
      781 alvdkklqis irkarslqdr mqhqqppqpl pppachppqg gtmaqstseq tgplqvllsq
      841 evplepnkev efgsssffhp paschelhss lypessslpp secnpsnris pnfqsasadi
      901 hdqvpsfpyr qglaessart eneahksgef adttgtglkd yrdccssskl eevhnvpvlt
      961 pqyqskantv nsgslptlfs yphppqaasp ekdsqhspcs klasspvrps idlvgayham
     1021 tpatssptqq cssdplqknk yyransqeil fpsqgengta dgckseafst kghvrslaeq
     1081 fqkmhavsqr kgthekdwit avcqdekspk ltqkpfinhs ssgyrqlihq nqenknqsse
     1141 klhstvdird gvvslkgfsa qhvasvsfcs hseelcrrgg qniadpvpyv erhshdggmk
     1201 evddgaassm vasmpvdrwv nnvtryyssq kankntewlp vpgrspllsd qravgddlsr
     1261 ipvhlhpewn qdteqelsel eslyqtslqa sqatrpflgr qdsarypfdq svsvnpgvrk
     1321 lpatagmgls ktptaeiers lcgssvssvs kvtytrehsr epeeeeiysa enfrriarsl
     1381 sgtvisnree tlvsshsfea pnmrkmpvdt shrsssstsl pfphdppvfp fdpqhnpnqv
     1441 qhpphdvlmp smvgmarkls gdqkniiqkl lvvpdrgeaf qgedypgval sygslpcvpk
     1501 gtlsqgqkpl vnlhlgggas svsgrllnpa aqtatlpdkr tmlwgkhagq pskslqegfl
     1561 qqpsqhpmhe shaiscrlpa stdystlrip repswdpgas qgcpvppscv kapgprrvdm
     1621 ppeedwrdss ytpqpgrrrm lpvhvvdgtf ssaskahrnm laraaaatgt mqnngw
//
LOCUS       XP_041329838            1628 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329838
VERSION     XP_041329838.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473904.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1628
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X5"
                     /calculated_mol_wt=180543
     Region          3..232
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cd02257"
                     /db_xref="CDD:239072"
     CDS             1..1628
                     /gene="USP54"
                     /coded_by="XM_041473904.1:491..5377"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mddaaecfen llmrihfhia detkedicta phcvshqkfa mtlfeqcvct scgatsdplp
       61 fiqmvhyist tslcnqaicm lerrekptpd mfgellqnas tmgdlrncps ncgekirirr
      121 vlmnspqiit iglvwdsdhs dlaedvihsl gtclklgdlf frvtddrakh selylvgmic
      181 yygkhystff fqtkirkwmy fddahvkeig pkwkdvvtkc ikghyqplll lyadprgtpv
      241 stqdlppqvd lqqynrtcyd sedsgrepsi ssdtrtdsst dsypykqahh esvvshfssd
      301 sqgtviynve ndaasqssrd tghltdsecn qrhvskkgsl adrkrsssrs rrkgdeaqss
      361 gyhsegetlk ekqaprtapk pssstsrlre fketvsnmih srpqqisqti qnsprggnsv
      421 dqaetrpsks lsahtrdwev estsseskss sssryrptwr pkreslnids ifskdkrkhc
      481 gytqlspfse eagkelsene vkeraahetr ssqsnvrykr gvlgrgtqhh vvdqhphliq
      541 rmesgyesse rnsnspvsld mplsesssth rdvhmkragg fvpawrnipk shsssileve
      601 sassigswtn sphtmgnggd ifvplkseld elqeevarra heqelrrkre kemeaamgfn
      661 prpsrfmdld elqnqgrsdg feksmqeads ifeeslnqeq kgdcaaalal cneaisklrl
      721 amhdasasth sralvdkklq isirkarslq drmqhqqppq plpppachpp qggtmaqsts
      781 eqtgplqvll sqevplepnk evefgsssff hppaschelh sslypesssl ppsecnpsnr
      841 ispnfqsasa dihdqvpsfp yrqglaessa rteneahksg efadttgtgl kdyrdccsss
      901 kleevhnvpv ltpqyqskan tvnsgslptl fsyphppqaa spekdsqhsp csklasspvr
      961 psidlvgayh amtpatsspt qqcssdplqk nkyyransqe ilfpsqgeng tadgckseaf
     1021 stkghvrsla eqfqkmhavs qrkgthekdw itavcqdeks pkltqkpfin hsssgyrqli
     1081 hqnqenknqs seklhstvdi rdgvvslkgf saqhvasvsf cshseelcrr ggqniadpvp
     1141 yverhshdgg mkevddgaas smvasmpvdr wvnnvtryys sqkankntew lpvpgrspll
     1201 sdqravgddl sripvhlhpe wnqdteqels eleslyqtsl qasqatrpfl grqdsarypf
     1261 dqsvsvnpgv rklpatagmg lsktptaeie rslcgssvss vskvtytreh srepeeeeiy
     1321 saenfrriar slsgtvisnr eetlvsshsf eapnmrkmpv dtshrsssst slpfphdppv
     1381 fpfdpqhnpn qvqhpphdvl mpsmvgmark lsgdqkniiq kllvvpdrge afqgedypgv
     1441 alsygslpcv pkgtlsqgqk plvnlhlggg assvsgrlln paaqtatlpd krtmlwgkha
     1501 gqpskslqeg flqqpsqhpm heshaiscrl pastdystlr iprepswdpg asqgcpvpps
     1561 cvkapgprrv dmppeedwrd ssytpqpgrr rmlpvhvvdg tfssaskahr nmlaraaaat
     1621 gtmqnngw
//
LOCUS       XP_041329846            1157 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329846
VERSION     XP_041329846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473912.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1157
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X6"
                     /calculated_mol_wt=129144
     Region          32..349
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(35,42,302,320)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..1157
                     /gene="USP54"
                     /coded_by="XM_041473912.1:1080..4553"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mswkrnyfsv grgnvqgmft prnttsiaps kglsnepgqn scflnsalqv lwhldifrrs
       61 frqitthkcm gdscifcalk gifnqfqcss ekvlpsdalr talaktfqde qrfqlgimdd
      121 aaecfenllm rihfhiadet kedictaphc vshqkfamtl feqcvctscg atsdplpfiq
      181 mvhyisttsl cnqaicmler rekptpdmfg ellqnastmg dlrncpsncg ekirirrvlm
      241 nspqiitigl vwdsdhsdla edvihslgtc lklgdlffrv tddrakhsel ylvgmicyyg
      301 khystfffqt kirkwmyfdd ahvkeigpkw kdvvtkcikg hyqpllllya dprgtpvstq
      361 dlppqvdlqq ynrtcydsed sgrepsissd trtdsstdsy pykqahhesv vshfssdsqg
      421 tviynvenda asqssrdtgh ltdsecnqrh vskkgsladr krsssrsrrk gdeaqssgyh
      481 segetlkekq aprtapkpss stsrlrefke tvsnmihsrp qqisqtiqns prggnsvdqa
      541 etrpskslsa htrdwevest ssesksssss ryrptwrpkr eslnidsifs kdkrkhcgyt
      601 qlspfseeag kelsenevke raahetrssq snvrykrgvl grgtqhhvvd qhphliqrme
      661 sgyesserns nspvsldmpl sesssthrdv hmkraggfvp awrnipkshs ssilevesas
      721 sigswtnsph tmgnggdifv plkseldelq eevarraheq elrrkrekem eaamgfnprp
      781 srfmdldelq nqvsvnpgvr klpatagmgl sktptaeier slcgssvssv skvtytrehs
      841 repeeeeiys aenfrriars lsgtvisnre etlvsshsfe apnmrkmpvd tshrssssts
      901 lpfphdppvf pfdpqhnpnq vqhpphdvlm psmvgmarkl sgdqkniiqk llvvpdrgea
      961 fqgedypgva lsygslpcvp kgtlsqgqkp lvnlhlggga ssvsgrllnp aaqtatlpdk
     1021 rtmlwgkhag qpskslqegf lqqpsqhpmh eshaiscrlp astdystlri prepswdpga
     1081 sqgcpvppsc vkapgprrvd mppeedwrds sytpqpgrrr mlpvhvvdgt fssaskahrn
     1141 mlaraaaatg tmqnngw
//
LOCUS       XP_041329857             802 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 54 isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329857
VERSION     XP_041329857.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473923.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     54 isoform X7"
                     /calculated_mol_wt=90746
     Region          32..349
                     /region_name="Peptidase_C19"
                     /note="Peptidase C19 contains ubiquitinyl hydrolases. They
                     are intracellular peptidases that remove ubiquitin
                     molecules from polyubiquinated peptides by cleavage of
                     isopeptide bonds. They hydrolyse bonds involving the
                     carboxyl group of the C-terminal Gly...; cl02553"
                     /db_xref="CDD:470612"
     CDS             1..802
                     /gene="USP54"
                     /coded_by="XM_041473923.1:1080..3488"
                     /db_xref="GeneID:121356958"
ORIGIN      
        1 mswkrnyfsv grgnvqgmft prnttsiaps kglsnepgqn scflnsalqv lwhldifrrs
       61 frqitthkcm gdscifcalk gifnqfqcss ekvlpsdalr talaktfqde qrfqlgimdd
      121 aaecfenllm rihfhiadet kedictaphc vshqkfamtl feqcvctscg atsdplpfiq
      181 mvhyisttsl cnqaicmler rekptpdmfg ellqnastmg dlrncpsncg ekirirrvlm
      241 nspqiitigl vwdsdhsdla edvihslgtc lklgdlffrv tddrakhsel ylvgmicyyg
      301 khystfffqt kirkwmyfdd ahvkeigpkw kdvvtkcikg hyqpllllya dprgtpvstq
      361 dlppqvdlqq ynrtcydsed sgrepsissd trtdsstdsy pykqahhesv vshfssdsqg
      421 tviynvenda asqssrdtgh ltdsecnqrh vskkgsladr krsssrsrrk gdeaqssgyh
      481 segetlkekq aprtapkpss stsrlrefke tvsnmihsrp qqisqtiqns prggnsvdqa
      541 etrpskslsa htrdwevest ssesksssss ryrptwrpkr eslnidsifs kdkrkhcgyt
      601 qlspfseeag kelsenevke raahetrssq snvrykrgvl grgtqhhvvd qhphliqrme
      661 sgyesserns nspvsldmpl sesssthrdv hmkraggfvp awrnipkshs ssilevesas
      721 sigswtnsph tmgnggdifv plkseldelq eevarraheq elrrkrekem eaamgfnprp
      781 srfmdldelq nqvnrlarsk yc
//
LOCUS       XP_041329867             498 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A11 [Pyrgilauda ruficollis].
ACCESSION   XP_041329867
VERSION     XP_041329867.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473933.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="annexin A11"
                     /calculated_mol_wt=53420
     Region          198..262
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          269..334
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          352..418
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          428..493
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..498
                     /gene="ANXA11"
                     /coded_by="XM_041473933.1:155..1651"
                     /db_xref="GeneID:121357011"
ORIGIN      
        1 msypgyppag gyppaapgss pwggaaypps npppiglenv agyanqfnps hmagmasnla
       61 gtfggtnlpq smypstpggy ppvppggfgq pppgqqpsyg gyappggnpp sgmppypgya
      121 ggpvpgqptp ppgqqpmgyp glpathpgqq pmpsypagpa vnpsmpsysg ttgpavtpgt
      181 hrnrgtitda pgfdplkdae vlrkamkgfg tdeqaiidcl gsrsnkqrqq iilsfktayg
      241 kdlikdlkse lsgnfertil ammktpvmfd ayeikeaikg vgtdenclie ilasrsnehi
      301 qelnrvykae ykktleeaik sdtsghfqrl lislaqgnrd estnvdmsvv qrdvqelyaa
      361 genrlgtdes kfnailcars rahlravfse yqrmcnrdie ssicremsgd lemgmlavvk
      421 clkntpaffa erlhkamkga gtkdrtliri mvsrsevdll diraeykrmy grslytditg
      481 dtsgdyrkil lklcggnd
//
LOCUS       XP_041329878              95 aa            linear   VRT 06-MAY-2021
DEFINITION  placenta-specific protein 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041329878
VERSION     XP_041329878.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473944.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..95
                     /product="placenta-specific protein 9"
                     /calculated_mol_wt=10498
     Region          22..93
                     /region_name="PLAC9"
                     /note="Placenta-specific protein 9; pfam15205"
                     /db_xref="CDD:434536"
     CDS             1..95
                     /gene="PLAC9"
                     /coded_by="XM_041473944.1:117..404"
                     /db_xref="GeneID:121357021"
ORIGIN      
        1 mlflwvlafa lvlqeqdpla sadpvsmvpg slergtwcne hmlherldti eekviktveh
       61 lesevkslln iisettlnip tvpgtplidv fddts
//
LOCUS       XP_041329891             411 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylcholine:ceramide cholinephosphotransferase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329891
VERSION     XP_041329891.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473957.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="phosphatidylcholine:ceramide
                     cholinephosphotransferase 1"
                     /calculated_mol_wt=47769
     Region          1..72
                     /region_name="SAM_SGMS1"
                     /note="SAM domain of sphingomyelin synthase; cd09514"
                     /db_xref="CDD:188913"
     Region          274..347
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..411
                     /gene="SGMS1"
                     /coded_by="XM_041473957.1:832..2067"
                     /db_xref="GeneID:121357029"
ORIGIN      
        1 mkevvlwspe evtswltdna vpeyceplkn ftgrdlinlt eedfkksplc rvssdsgqrl
       61 lnmieglkma hhmeahkngh anghvragda arqngfgaal klngvpngfk kemikipmpe
      121 persqypmew gktflafiya lfcfvfttvt isvvhervpp kevqpplpda ffdrfdrvqw
      181 afsiceingm ilvglwfvqw lllkyksiis rrffcivgtl ylyrcitmyv ttlpvpgmhf
      241 kcspklfgdw eshlrrimkl iaggglsitg shnmcgdyly sghtviltlt ylfikeyspr
      301 rlwwyhwlcw alsmvgmfci llahdhytvd vvvayyittr lfwwyhtman qqvlkeasqt
      361 nllarvwwyk pfqyfeknvq givprsyhwp lrcpalargr qvkysrlvsd t
//
LOCUS       XP_041329900             411 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylcholine:ceramide cholinephosphotransferase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329900
VERSION     XP_041329900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="phosphatidylcholine:ceramide
                     cholinephosphotransferase 1"
                     /calculated_mol_wt=47769
     Region          1..72
                     /region_name="SAM_SGMS1"
                     /note="SAM domain of sphingomyelin synthase; cd09514"
                     /db_xref="CDD:188913"
     Region          274..347
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..411
                     /gene="SGMS1"
                     /coded_by="XM_041473966.1:696..1931"
                     /db_xref="GeneID:121357029"
ORIGIN      
        1 mkevvlwspe evtswltdna vpeyceplkn ftgrdlinlt eedfkksplc rvssdsgqrl
       61 lnmieglkma hhmeahkngh anghvragda arqngfgaal klngvpngfk kemikipmpe
      121 persqypmew gktflafiya lfcfvfttvt isvvhervpp kevqpplpda ffdrfdrvqw
      181 afsiceingm ilvglwfvqw lllkyksiis rrffcivgtl ylyrcitmyv ttlpvpgmhf
      241 kcspklfgdw eshlrrimkl iaggglsitg shnmcgdyly sghtviltlt ylfikeyspr
      301 rlwwyhwlcw alsmvgmfci llahdhytvd vvvayyittr lfwwyhtman qqvlkeasqt
      361 nllarvwwyk pfqyfeknvq givprsyhwp lrcpalargr qvkysrlvsd t
//
LOCUS       XP_041329908             411 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylcholine:ceramide cholinephosphotransferase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329908
VERSION     XP_041329908.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473974.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="phosphatidylcholine:ceramide
                     cholinephosphotransferase 1"
                     /calculated_mol_wt=47769
     Region          1..72
                     /region_name="SAM_SGMS1"
                     /note="SAM domain of sphingomyelin synthase; cd09514"
                     /db_xref="CDD:188913"
     Region          274..347
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..411
                     /gene="SGMS1"
                     /coded_by="XM_041473974.1:1000..2235"
                     /db_xref="GeneID:121357029"
ORIGIN      
        1 mkevvlwspe evtswltdna vpeyceplkn ftgrdlinlt eedfkksplc rvssdsgqrl
       61 lnmieglkma hhmeahkngh anghvragda arqngfgaal klngvpngfk kemikipmpe
      121 persqypmew gktflafiya lfcfvfttvt isvvhervpp kevqpplpda ffdrfdrvqw
      181 afsiceingm ilvglwfvqw lllkyksiis rrffcivgtl ylyrcitmyv ttlpvpgmhf
      241 kcspklfgdw eshlrrimkl iaggglsitg shnmcgdyly sghtviltlt ylfikeyspr
      301 rlwwyhwlcw alsmvgmfci llahdhytvd vvvayyittr lfwwyhtman qqvlkeasqt
      361 nllarvwwyk pfqyfeknvq givprsyhwp lrcpalargr qvkysrlvsd t
//
LOCUS       XP_041329916             411 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylcholine:ceramide cholinephosphotransferase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329916
VERSION     XP_041329916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473982.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="phosphatidylcholine:ceramide
                     cholinephosphotransferase 1"
                     /calculated_mol_wt=47769
     Region          1..72
                     /region_name="SAM_SGMS1"
                     /note="SAM domain of sphingomyelin synthase; cd09514"
                     /db_xref="CDD:188913"
     Region          274..347
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..411
                     /gene="SGMS1"
                     /coded_by="XM_041473982.1:584..1819"
                     /db_xref="GeneID:121357029"
ORIGIN      
        1 mkevvlwspe evtswltdna vpeyceplkn ftgrdlinlt eedfkksplc rvssdsgqrl
       61 lnmieglkma hhmeahkngh anghvragda arqngfgaal klngvpngfk kemikipmpe
      121 persqypmew gktflafiya lfcfvfttvt isvvhervpp kevqpplpda ffdrfdrvqw
      181 afsiceingm ilvglwfvqw lllkyksiis rrffcivgtl ylyrcitmyv ttlpvpgmhf
      241 kcspklfgdw eshlrrimkl iaggglsitg shnmcgdyly sghtviltlt ylfikeyspr
      301 rlwwyhwlcw alsmvgmfci llahdhytvd vvvayyittr lfwwyhtman qqvlkeasqt
      361 nllarvwwyk pfqyfeknvq givprsyhwp lrcpalargr qvkysrlvsd t
//
LOCUS       XP_041329926             411 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylcholine:ceramide cholinephosphotransferase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329926
VERSION     XP_041329926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041473992.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="phosphatidylcholine:ceramide
                     cholinephosphotransferase 1"
                     /calculated_mol_wt=47769
     Region          1..72
                     /region_name="SAM_SGMS1"
                     /note="SAM domain of sphingomyelin synthase; cd09514"
                     /db_xref="CDD:188913"
     Region          274..347
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..411
                     /gene="SGMS1"
                     /coded_by="XM_041473992.1:1068..2303"
                     /db_xref="GeneID:121357029"
ORIGIN      
        1 mkevvlwspe evtswltdna vpeyceplkn ftgrdlinlt eedfkksplc rvssdsgqrl
       61 lnmieglkma hhmeahkngh anghvragda arqngfgaal klngvpngfk kemikipmpe
      121 persqypmew gktflafiya lfcfvfttvt isvvhervpp kevqpplpda ffdrfdrvqw
      181 afsiceingm ilvglwfvqw lllkyksiis rrffcivgtl ylyrcitmyv ttlpvpgmhf
      241 kcspklfgdw eshlrrimkl iaggglsitg shnmcgdyly sghtviltlt ylfikeyspr
      301 rlwwyhwlcw alsmvgmfci llahdhytvd vvvayyittr lfwwyhtman qqvlkeasqt
      361 nllarvwwyk pfqyfeknvq givprsyhwp lrcpalargr qvkysrlvsd t
//
LOCUS       XP_041329935             411 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylcholine:ceramide cholinephosphotransferase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329935
VERSION     XP_041329935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="phosphatidylcholine:ceramide
                     cholinephosphotransferase 1"
                     /calculated_mol_wt=47769
     Region          1..72
                     /region_name="SAM_SGMS1"
                     /note="SAM domain of sphingomyelin synthase; cd09514"
                     /db_xref="CDD:188913"
     Region          274..347
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..411
                     /gene="SGMS1"
                     /coded_by="XM_041474001.1:836..2071"
                     /db_xref="GeneID:121357029"
ORIGIN      
        1 mkevvlwspe evtswltdna vpeyceplkn ftgrdlinlt eedfkksplc rvssdsgqrl
       61 lnmieglkma hhmeahkngh anghvragda arqngfgaal klngvpngfk kemikipmpe
      121 persqypmew gktflafiya lfcfvfttvt isvvhervpp kevqpplpda ffdrfdrvqw
      181 afsiceingm ilvglwfvqw lllkyksiis rrffcivgtl ylyrcitmyv ttlpvpgmhf
      241 kcspklfgdw eshlrrimkl iaggglsitg shnmcgdyly sghtviltlt ylfikeyspr
      301 rlwwyhwlcw alsmvgmfci llahdhytvd vvvayyittr lfwwyhtman qqvlkeasqt
      361 nllarvwwyk pfqyfeknvq givprsyhwp lrcpalargr qvkysrlvsd t
//
LOCUS       XP_041329943             411 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylcholine:ceramide cholinephosphotransferase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329943
VERSION     XP_041329943.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474009.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="phosphatidylcholine:ceramide
                     cholinephosphotransferase 1"
                     /calculated_mol_wt=47769
     Region          1..72
                     /region_name="SAM_SGMS1"
                     /note="SAM domain of sphingomyelin synthase; cd09514"
                     /db_xref="CDD:188913"
     Region          274..347
                     /region_name="PAP2_C"
                     /note="PAP2 superfamily C-terminal; pfam14360"
                     /db_xref="CDD:464150"
     CDS             1..411
                     /gene="SGMS1"
                     /coded_by="XM_041474009.1:554..1789"
                     /db_xref="GeneID:121357029"
ORIGIN      
        1 mkevvlwspe evtswltdna vpeyceplkn ftgrdlinlt eedfkksplc rvssdsgqrl
       61 lnmieglkma hhmeahkngh anghvragda arqngfgaal klngvpngfk kemikipmpe
      121 persqypmew gktflafiya lfcfvfttvt isvvhervpp kevqpplpda ffdrfdrvqw
      181 afsiceingm ilvglwfvqw lllkyksiis rrffcivgtl ylyrcitmyv ttlpvpgmhf
      241 kcspklfgdw eshlrrimkl iaggglsitg shnmcgdyly sghtviltlt ylfikeyspr
      301 rlwwyhwlcw alsmvgmfci llahdhytvd vvvayyittr lfwwyhtman qqvlkeasqt
      361 nllarvwwyk pfqyfeknvq givprsyhwp lrcpalargr qvkysrlvsd t
//
LOCUS       XP_041329955            1188 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 5B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329955
VERSION     XP_041329955.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474021.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1188
                     /product="AT-rich interactive domain-containing protein 5B
                     isoform X1"
                     /calculated_mol_wt=132841
     Region          326..420
                     /region_name="ARID_ARID5B"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 5B (ARID5B) and
                     similar proteins; cd16885"
                     /db_xref="CDD:350649"
     Site            order(347..353,378,380..381,384,395,397..399,401)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350649"
     CDS             1..1188
                     /gene="ARID5B"
                     /coded_by="XM_041474021.1:82..3648"
                     /db_xref="GeneID:121357060"
ORIGIN      
        1 mplpcccspq wvgapcgshg pyvfyrafrf qrrgggrarv lslgdfffvr craeepacia
       61 elqllweert srqllssakl yflpedtpqg rtsdhgedev iavsekvtvk ledlakwaqs
      121 dfskwkcgfr aepvqpmdvg kngqkealtr yrqstlnsgl nfkdilkeka dlgeddedsn
      181 llilsypqyc ryrsmlkriq dkpssiltdq fvlalggiav tsknpqifyc rdtfdhptli
      241 enesicdefa pnlkgrprkk kpcpqrrdsl ngikdsnnns eskavakvkc eaksalpkpk
      301 snnsnckkgs sedkskiaig eecradeqaf lvalykymke rktpieripy lgfkqinlwt
      361 mfqaaqklgg yetitarrqw khiydelggn pgstsaatct rrhyerlilp yerfikgeed
      421 kplppvkprk qdnssqesea ktkvsatkri knenqkskke kdnsqkpqda sevsseqekd
      481 qesadqknfp ehptvgemkq pvqgpppllp etartlplek tdmtenstns ekakedvqhs
      541 ssfssvsvpa eedtvldatv tkrlhpsada ledtkpeqrl hkaftdsles eppempftaf
      601 pvhlptqsdm edeklpgmad yianctvkvd qlgnedihna lkqtpkvlvv qnfdmfkeke
      661 lpgsmnddst fsytpllysk gnpgimspla kkkllsqvsg atlscnypyg spppliskkk
      721 lssrdelssg isqgphapns dpvainrpsv iqhvqsfktk eerksinnvf khdmlskpdp
      781 qrcdfskhhl sslaesylpk ldiqdckdkm sekralqhsh vptfladfys sphlhslyrh
      841 tehhlnneqt skylprdmfr esenistftq hkhqeklnln yrpslhqqek katveassdd
      901 qptdlslpks ihkqtakvpg sslphsstaq qeckgispfq aggsqavsld cnpkacrvsp
      961 maltapkkhs ellhrsgkqq aqrlenlrkm egmvhpiisr rtspqnvgaa rplkrsledl
     1021 dkvisekkir avspihlpke tpakdkvpdq egegsksvhg lhsgsmlesh kfplsapifp
     1081 glypgslctg lnnrlppgys hplqylknqt vlsplmqpla lhsfmvqrqf ltspansqql
     1141 yrhlaaatpv gssygdllhn siyplaainp qaafppsqls svhpstkl
//
LOCUS       XP_041329957            1102 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 5B isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041329957
VERSION     XP_041329957.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474023.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1102
                     /product="AT-rich interactive domain-containing protein 5B
                     isoform X2"
                     /calculated_mol_wt=123111
     Region          259..334
                     /region_name="ARID"
                     /note="ARID/BRIGHT DNA binding domain family; cl28902"
                     /db_xref="CDD:355778"
     Site            order(267..273,292,294..295,298,309,311..313,315)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350627"
     CDS             1..1102
                     /gene="ARID5B"
                     /coded_by="XM_041474023.1:82..3390"
                     /db_xref="GeneID:121357060"
ORIGIN      
        1 mplpcccspq wvgapcgshg pyvfyrafrf qrrgggrarv lslgdfffvr craeepacia
       61 elqllweert srqllssakl yflpedtpqg rtsdhgedev iavsekvtvk ledlakwaqs
      121 dfskwkcgfr aepvqpmdvg kngqkealtr yrqstlnsgl nfkdilkeka dlgeddedsn
      181 llilsypqyc ryrsmlkriq dkpssiltdq fvlalggiav tsknpqifyc rdtfdhptli
      241 enesicdefa pnlkgrprkk kpcpqrrdsl ngikdsnnns eskavakita rrqwkhiyde
      301 lggnpgstsa atctrrhyer lilpyerfik geedkplppv kprkqdnssq eseaktkvsa
      361 tkriknenqk skkekdnsqk pqdasevsse qekdqesadq knfpehptvg emkqpvqgpp
      421 pllpetartl plektdmten stnsekaked vqhsssfssv svpaeedtvl datvtkrlhp
      481 sadaledtkp eqrlhkaftd sleseppemp ftafpvhlpt qsdmedeklp gmadyianct
      541 vkvdqlgned ihnalkqtpk vlvvqnfdmf kekelpgsmn ddstfsytpl lyskgnpgim
      601 splakkklls qvsgatlscn ypygspppli skkklssrde lssgisqgph apnsdpvain
      661 rpsviqhvqs fktkeerksi nnvfkhdmls kpdpqrcdfs khhlsslaes ylpkldiqdc
      721 kdkmsekral qhshvptfla dfyssphlhs lyrhtehhln neqtskylpr dmfresenis
      781 tftqhkhqek lnlnyrpslh qqekkatvea ssddqptdls lpksihkqta kvpgsslphs
      841 staqqeckgi spfqaggsqa vsldcnpkac rvspmaltap kkhsellhrs gkqqaqrlen
      901 lrkmegmvhp iisrrtspqn vgaarplkrs ledldkvise kkiravspih lpketpakdk
      961 vpdqegegsk svhglhsgsm leshkfplsa pifpglypgs lctglnnrlp pgyshplqyl
     1021 knqtvlsplm qplalhsfmv qrqfltspan sqqlyrhlaa atpvgssygd llhnsiypla
     1081 ainpqaafpp sqlssvhpst kl
//
LOCUS       XP_041329963            1672 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329963
VERSION     XP_041329963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474029.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1672
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=184074
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1613..1671
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1620,1622,1625,1629,1647..1648,1663,1665..1666)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1672
                     /gene="SORBS1"
                     /coded_by="XM_041474029.1:104..5122"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqsps sellhtptpp
     1261 plpfarrals pevqavtsew ialtvgvsps ttpaitpplp pppeaslsht dylspsaaas
     1321 psptvslhhs hlsgsstprs iksplpsssp rpqssarsfy qatpqneekf vdspspsvty
     1381 snssrwaves pesilaeqrd ttasqawlqk tgegsshteq sahavpkisv erclkpsqld
     1441 mrasperrpv gssednqlcq elmaivqggk tekrdmrkgd tgklqngekk tadskvfsss
     1501 aplssstlss stvttqpppr ltrrvskpqp shhslragpd lteseksyvd avcneiinia
     1561 eksvhycsti sqpldsrhkv tsndhkssli isqqpqaqqq gaspersqtp rdivsyqaly
     1621 sytpqnddel elrdgdivdv mekcddgwfv gtsrrtrqfg tfpgnyvkll yl
//
LOCUS       XP_041329973            1646 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329973
VERSION     XP_041329973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1646
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=181515
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1587..1645
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1594,1596,1599,1603,1621..1622,1637,1639..1640)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1646
                     /gene="SORBS1"
                     /coded_by="XM_041474039.1:104..5044"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqsps sellhtptpp
     1261 plpfarrals pevqavtsew ialtvgvsps ttpaitpplp pppeaslsht dylspsaaas
     1321 psptvslhhs hlsgsstprs iksplpsssp rpqssarsfy qatpqneekf vdspspsvty
     1381 snssrwaves pesilaeqrd ttasqawlqk tgegsshteq sahavpkisv erclkpsqld
     1441 mrasperrpv gssednqlcq elmaivqggk tekrdmrkgd tgklqngekk ppprltrrvs
     1501 kpqpshhslr agpdltesek syvdavcnei iniaeksvhy cstisqplds rhkvtsndhk
     1561 ssliisqqpq aqqqgasper sqtprdivsy qalysytpqn ddelelrdgd ivdvmekcdd
     1621 gwfvgtsrrt rqfgtfpgny vkllyl
//
LOCUS       XP_041329982            1628 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329982
VERSION     XP_041329982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1628
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X3"
                     /calculated_mol_wt=179210
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1569..1627
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1576,1578,1581,1585,1603..1604,1619,1621..1622)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1628
                     /gene="SORBS1"
                     /coded_by="XM_041474048.1:104..4990"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqsps sellhtptpp
     1261 plpfarrals pevqavtsew ialtvgvsps ttpaitpplp pppeaslsht dylspsaaas
     1321 psptvslhhs hlsgsstprs iksplpsssp rpqssarsfy qatpqneekf vdspspsvty
     1381 snssrwaves pesilaeqrd ttasqawlqk tgegsshteq sahavpkisv erclkpsqld
     1441 mrasperrpv gssednqlcq elmaivqggk tekrdmrkgd tgklqngekk tadskvfsss
     1501 aplssstlss stvttqpppr ltrrvskpqp shhslragpd lteseksyvq pqaqqqgasp
     1561 ersqtprdiv syqalysytp qnddelelrd gdivdvmekc ddgwfvgtsr rtrqfgtfpg
     1621 nyvkllyl
//
LOCUS       XP_041329992            1608 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329992
VERSION     XP_041329992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1608
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X4"
                     /calculated_mol_wt=177017
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1549..1607
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1556,1558,1561,1565,1583..1584,1599,1601..1602)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1608
                     /gene="SORBS1"
                     /coded_by="XM_041474058.1:104..4930"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqsps sellhtptpp
     1261 plpfarrals pevqavtsew ialtvgvsps ttpaitpplp pppeaslsht dylspsaaas
     1321 psptvslhhs hlsgsstprs iksplpsssp rpqssarsfy qatpqneekf vdspspsvty
     1381 snssrwaves pesilaeqrd ttasqawlqk tgegsshteq sahavpkisv erclkpsqld
     1441 mrasperrpv gssednqlcq elmaivqggk tekrdmrkgd tgklqngekk tadskvfsss
     1501 aplssstlss stvttqpppr ltrrvskpqq pqaqqqgasp ersqtprdiv syqalysytp
     1561 qnddelelrd gdivdvmekc ddgwfvgtsr rtrqfgtfpg nyvkllyl
//
LOCUS       XP_041329999            1582 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041329999
VERSION     XP_041329999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474065.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1582
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X5"
                     /calculated_mol_wt=174459
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1523..1581
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1530,1532,1535,1539,1557..1558,1573,1575..1576)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1582
                     /gene="SORBS1"
                     /coded_by="XM_041474065.1:104..4852"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqsps sellhtptpp
     1261 plpfarrals pevqavtsew ialtvgvsps ttpaitpplp pppeaslsht dylspsaaas
     1321 psptvslhhs hlsgsstprs iksplpsssp rpqssarsfy qatpqneekf vdspspsvty
     1381 snssrwaves pesilaeqrd ttasqawlqk tgegsshteq sahavpkisv erclkpsqld
     1441 mrasperrpv gssednqlcq elmaivqggk tekrdmrkgd tgklqngekk ppprltrrvs
     1501 kpqqpqaqqq gaspersqtp rdivsyqaly sytpqnddel elrdgdivdv mekcddgwfv
     1561 gtsrrtrqfg tfpgnyvkll yl
//
LOCUS       XP_041330009            1569 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330009
VERSION     XP_041330009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474075.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1569
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X6"
                     /calculated_mol_wt=172945
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1510..1568
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1517,1519,1522,1526,1544..1545,1560,1562..1563)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1569
                     /gene="SORBS1"
                     /coded_by="XM_041474075.1:104..4813"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqsps sellhtptpp
     1261 plpfarrals pevqavtsew ialtvgvsps ttpaitpplp pppeaslsht dylspsaaas
     1321 psptvslhhs hlsgsstprs iksplpsssp rpqssarsfy qatpqneekf vdspspsvty
     1381 snssrwaves pesilaeqrd ttasqawlqk tgegsshteq sahavpkisv erclkpsqld
     1441 mrasperrpv gssednqlcq elmaivqggk tekrdmrkgd tgklqngekk qpqaqqqgas
     1501 persqtprdi vsyqalysyt pqnddelelr dgdivdvmek cddgwfvgts rrtrqfgtfp
     1561 gnyvkllyl
//
LOCUS       XP_041330017            1390 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330017
VERSION     XP_041330017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1390
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X7"
                     /calculated_mol_wt=153988
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1331..1389
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1338,1340,1343,1347,1365..1366,1381,1383..1384)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1390
                     /gene="SORBS1"
                     /coded_by="XM_041474083.1:104..4276"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqpsh hslragpdlt
     1261 eseksyvdav cneiiniaek svhycstisq pldsrhkvts ndhkssliis qqpqaqqqga
     1321 spersqtprd ivsyqalysy tpqnddelel rdgdivdvme kcddgwfvgt srrtrqfgtf
     1381 pgnyvkllyl
//
LOCUS       XP_041330026            1346 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330026
VERSION     XP_041330026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1346
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X8"
                     /calculated_mol_wt=149123
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1287..1345
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1294,1296,1299,1303,1321..1322,1337,1339..1340)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1346
                     /gene="SORBS1"
                     /coded_by="XM_041474092.1:104..4144"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqpsh hslragpdlt
     1261 eseksyvqpq aqqqgasper sqtprdivsy qalysytpqn ddelelrdgd ivdvmekcdd
     1321 gwfvgtsrrt rqfgtfpgny vkllyl
//
LOCUS       XP_041330034            1326 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330034
VERSION     XP_041330034.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474100.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1326
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X9"
                     /calculated_mol_wt=146931
     Region          664..705
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          1088..1142
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(1094,1096,1099,1103,1121..1122,1135,1137..1138)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          1162..1219
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(1168,1170,1173,1177,1195..1196,1211,1213..1214)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1267..1325
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1274,1276,1279,1283,1301..1302,1317,1319..1320)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1326
                     /gene="SORBS1"
                     /coded_by="XM_041474100.1:104..4084"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qalapprppl
      181 pkeesfawrp rtdtkatnll pvpimdcvyl napkpytqra spntsarcyl ssptpygavp
      241 sgkqglpagr spssgpkdev hagqpllesh sssgassiql spvradpssk agmnsshetk
      301 adkkvsklyv aclsnstcsg asqnstgtth dpaastslga eltqapatni vpsvtdteks
      361 lpaappppip prpyfyivls kdavsygagq psrtqssppq avrdrvlepq sttatedrmr
      421 kepyltqqrq ppykamgrsm datattsaqp gvivvpllqv npdrqqegss stpppplvpf
      481 gqgsvfpeiv ppgspltfpt lddfipphlq rgshhnqaps tsgtlpsvyp klpffsspps
      541 lvppvtgalh rglkpeitgv ishtdpgpvl nevpqpgtdy ptsitsisks asaypsttiv
      601 nptivllqhn reqqkrlssl adsvpdrlvs dkvdsallrd kpaqetvpse kraveekrst
      661 vrsphymadt svddigiplr ntdrskdwyk tmfkqihkln rdnpeenpyc ptytfpelpe
      721 iqqkteednp ysptyqfpas tpspiseded sdsfsprysy sedsrtqvpr sksemdnids
      781 ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy qpgkssvlnn
      841 ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre drksdlekdl
      901 ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn yhavkresel
      961 vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa pvdymetpee
     1021 ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg dllnvddtak
     1081 rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr vgifpqsyie
     1141 flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir rvdenwyegr
     1201 isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqqpq aqqqgasper
     1261 sqtprdivsy qalysytpqn ddelelrdgd ivdvmekcdd gwfvgtsrrt rqfgtfpgny
     1321 vkllyl
//
LOCUS       XP_041330042            1403 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330042
VERSION     XP_041330042.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474108.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1403
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X10"
                     /calculated_mol_wt=155585
     Region          395..436
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          819..873
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(825,827,830,834,852..853,866,868..869)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          893..950
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(899,901,904,908,926..927,942,944..945)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1344..1402
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1351,1353,1356,1360,1378..1379,1394,1396..1397)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1403
                     /gene="SORBS1"
                     /coded_by="XM_041474108.1:104..4315"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qdatattsaq
      181 pgvivvpllq vnpdrqqegs sstpppplvp fgqgsvfpei vppgspltfp tlddfipphl
      241 qrgshhnqap stsgtlpsvy pklpffsspp slvppvtgal hrglkpeitg vishtdpgpv
      301 lnevpqpgtd yptsitsisk sasaypstti vnptivllqh nreqqkrlss ladsvpdrlv
      361 sdkvdsallr dkpaqetvps ekraveekrs tvrsphymad tsvddigipl rntdrskdwy
      421 ktmfkqihkl nrdnpeenpy cptytfpelp eiqqkteedn pysptyqfpa stpspisede
      481 dsdsfsprys ysedsrtqvp rsksemdnid sekvvkrsat lplpnrassl ksspertdwe
      541 ppdkkvdtrk yraeprsiyd yqpgkssvln nekmtrdisp eeidlknepw ykffselefg
      601 kpppkkiwdy tpgdcsiltr edrksdlekd lylyqtelea dlekmeklyk aphkkpqknt
      661 agvtpletst dhssystysp nyhavkrese lvgdpaalen erqiyksvle ggdipfqgls
      721 glkrpsssas tkdsesprhf apvdymetpe eilrrryddk eklledqrrl kreqeeadia
      781 arrhtgvipt hhqfitnerf gdllnvddta krksgsemrp arakfdfkaq tlkelplqkg
      841 divyiykqid qnwlegehhg rvgifpqsyi eflppaekaq pkkplplqvl eygdaiakfn
      901 fngdtqvems frkgeritli rrvdenwyeg risgtsrqgi fpvtyvevlk rpvvknaidy
      961 pdppvslsps rsmtaspqsp ssellhtptp pplpfarral spevqavtse wialtvgvsp
     1021 sttpaitppl ppppeaslsh tdylspsaaa spsptvslhh shlsgsstpr siksplpsss
     1081 prpqssarsf yqatpqneek fvdspspsvt ysnssrwave spesilaeqr dttasqawlq
     1141 ktgegsshte qsahavpkis verclkpsql dmrasperrp vgssednqlc qelmaivqgg
     1201 ktekrdmrkg dtgklqngek ktadskvfss saplssstls sstvttqppp rltrrvskpq
     1261 pshhslragp dlteseksyv davcneiini aeksvhycst isqpldsrhk vtsndhkssl
     1321 iisqqpqaqq qgaspersqt prdivsyqal ysytpqndde lelrdgdivd vmekcddgwf
     1381 vgtsrrtrqf gtfpgnyvkl lyl
//
LOCUS       XP_041330052            1036 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330052
VERSION     XP_041330052.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474118.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1036
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X11"
                     /calculated_mol_wt=116132
     Region          395..436
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          798..852
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(804,806,809,813,831..832,845,847..848)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          872..929
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(878,880,883,887,905..906,921,923..924)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          977..1035
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(984,986,989,993,1011..1012,1027,1029..1030)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1036
                     /gene="SORBS1"
                     /coded_by="XM_041474118.1:104..3214"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qdatattsaq
      181 pgvivvpllq vnpdrqqegs sstpppplvp fgqgsvfpei vppgspltfp tlddfipphl
      241 qrgshhnqap stsgtlpsvy pklpffsspp slvppvtgal hrglkpeitg vishtdpgpv
      301 lnevpqpgtd yptsitsisk sasaypstti vnptivllqh nreqqkrlss ladsvpdrlv
      361 sdkvdsallr dkpaqetvps ekraveekrs tvrsphymad tsvddigipl rntdrskdwy
      421 ktmfkqihkl nrdnpeenpy cptytfpelp eiqqkteded sdsfsprysy sedsrtqvpr
      481 sksemdnids ekvvkrsatl plpnrasslk sspertdwep pdkkvdtrky raeprsiydy
      541 qpgkssvlnn ekmtrdispe eidlknepwy kffselefgk pppkkiwdyt pgdcsiltre
      601 drksdlekdl ylyqtelead lekmeklyka phkkpqknta gvtpletstd hssystyspn
      661 yhavkresel vgdpaalene rqiyksvleg gdipfqglsg lkrpsssast kdsesprhfa
      721 pvdymetpee ilrrryddke klledqrrlk reqeeadiaa rrhtgvipth hqfitnerfg
      781 dllnvddtak rksgsemrpa rakfdfkaqt lkelplqkgd ivyiykqidq nwlegehhgr
      841 vgifpqsyie flppaekaqp kkplplqvle ygdaiakfnf ngdtqvemsf rkgeritlir
      901 rvdenwyegr isgtsrqgif pvtyvevlkr pvvknaidyp dppvslspsr smtaspqqpq
      961 aqqqgasper sqtprdivsy qalysytpqn ddelelrdgd ivdvmekcdd gwfvgtsrrt
     1021 rqfgtfpgny vkllyl
//
LOCUS       XP_041330061            1313 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X12 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330061
VERSION     XP_041330061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474127.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1313
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X12"
                     /calculated_mol_wt=145446
     Region          395..436
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          773..827
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(779,781,784,788,806..807,820,822..823)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          847..904
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(853,855,858,862,880..881,896,898..899)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          1254..1312
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(1261,1263,1266,1270,1288..1289,1304,1306..1307)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1313
                     /gene="SORBS1"
                     /coded_by="XM_041474127.1:104..4045"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qdatattsaq
      181 pgvivvpllq vnpdrqqegs sstpppplvp fgqgsvfpei vppgspltfp tlddfipphl
      241 qrgshhnqap stsgtlpsvy pklpffsspp slvppvtgal hrglkpeitg vishtdpgpv
      301 lnevpqpgtd yptsitsisk sasaypstti vnptivllqh nreqqkrlss ladsvpdrlv
      361 sdkvdsallr dkpaqetvps ekraveekrs tvrsphymad tsvddigipl rntdrskdwy
      421 ktmfkqihkl nrdedsdsfs prysysedsr tqvprsksem dnidsekvvk rsatlplpnr
      481 asslkssper tdweppdkkv dtrkyraepr siydyqpgks svlnnekmtr dispeeidlk
      541 nepwykffse lefgkpppkk iwdytpgdcs iltredrksd lekdlylyqt eleadlekme
      601 klykaphkkp qkntagvtpl etstdhssys tyspnyhavk reselvgdpa alenerqiyk
      661 svleggdipf qglsglkrps ssastkdses prhfapvdym etpeeilrrr yddkeklled
      721 qrrlkreqee adiaarrhtg vipthhqfit nerfgdllnv ddtakrksgs emrparakfd
      781 fkaqtlkelp lqkgdivyiy kqidqnwleg ehhgrvgifp qsyieflppa ekaqpkkplp
      841 lqvleygdai akfnfngdtq vemsfrkger itlirrvden wyegrisgts rqgifpvtyv
      901 evlkrpvvkn aidypdppvs lspsrsmtas pqspssellh tptppplpfa rralspevqa
      961 vtsewialtv gvspsttpai tpplppppea slshtdylsp saaaspsptv slhhshlsgs
     1021 stprsikspl psssprpqss arsfyqatpq neekfvdsps psvtysnssr wavespesil
     1081 aeqrdttasq awlqktgegs shteqsahav pkisverclk psqldmrasp errpvgssed
     1141 nqlcqelmai vqggktekrd mrkgdtgklq ngekktadsk vfsssaplss stlssstvtt
     1201 qppprltrrv skpqpshhsl ragpdltese ksyvqpqaqq qgaspersqt prdivsyqal
     1261 ysytpqndde lelrdgdivd vmekcddgwf vgtsrrtrqf gtfpgnyvkl lyl
//
LOCUS       XP_041330070            1004 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X13 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330070
VERSION     XP_041330070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1004
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X13"
                     /calculated_mol_wt=112753
     Region          363..404
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          766..820
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(772,774,777,781,799..800,813,815..816)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          840..897
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(846,848,851,855,873..874,889,891..892)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          945..1003
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(952,954,957,961,979..980,995,997..998)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1004
                     /gene="SORBS1"
                     /coded_by="XM_041474136.1:104..3118"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kemdptkvcs
       61 gkgavtlrat psyegnrnit spcpqdveqp enlepenset ddwrsssntd angdaqpssl
      121 aakgyrsvrp nlssdskpqd atattsaqpg vivvpllqvn pdrqqegsss tpppplvpfg
      181 qgsvfpeivp pgspltfptl ddfipphlqr gshhnqapst sgtlpsvypk lpffssppsl
      241 vppvtgalhr glkpeitgvi shtdpgpvln evpqpgtdyp tsitsisksa saypsttivn
      301 ptivllqhnr eqqkrlssla dsvpdrlvsd kvdsallrdk paqetvpsek raveekrstv
      361 rsphymadts vddigiplrn tdrskdwykt mfkqihklnr dnpeenpycp tytfpelpei
      421 qqktededsd sfsprysyse dsrtqvprsk semdnidsek vvkrsatlpl pnrasslkss
      481 pertdweppd kkvdtrkyra eprsiydyqp gkssvlnnek mtrdispeei dlknepwykf
      541 fselefgkpp pkkiwdytpg dcsiltredr ksdlekdlyl yqteleadle kmeklykaph
      601 kkpqkntagv tpletstdhs systyspnyh avkreselvg dpaalenerq iyksvleggd
      661 ipfqglsglk rpsssastkd sesprhfapv dymetpeeil rrryddkekl ledqrrlkre
      721 qeeadiaarr htgvipthhq fitnerfgdl lnvddtakrk sgsemrpara kfdfkaqtlk
      781 elplqkgdiv yiykqidqnw legehhgrvg ifpqsyiefl ppaekaqpkk plplqvleyg
      841 daiakfnfng dtqvemsfrk geritlirrv denwyegris gtsrqgifpv tyvevlkrpv
      901 vknaidypdp pvslspsrsm taspqqpqaq qqgaspersq tprdivsyqa lysytpqndd
      961 elelrdgdiv dvmekcddgw fvgtsrrtrq fgtfpgnyvk llyl
//
LOCUS       XP_041330080             979 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X14 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330080
VERSION     XP_041330080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..979
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X14"
                     /calculated_mol_wt=109788
     Region          363..404
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          741..795
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(747,749,752,756,774..775,788,790..791)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          815..872
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(821,823,826,830,848..849,864,866..867)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          920..978
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(927,929,932,936,954..955,970,972..973)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..979
                     /gene="SORBS1"
                     /coded_by="XM_041474146.1:104..3043"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kemdptkvcs
       61 gkgavtlrat psyegnrnit spcpqdveqp enlepenset ddwrsssntd angdaqpssl
      121 aakgyrsvrp nlssdskpqd atattsaqpg vivvpllqvn pdrqqegsss tpppplvpfg
      181 qgsvfpeivp pgspltfptl ddfipphlqr gshhnqapst sgtlpsvypk lpffssppsl
      241 vppvtgalhr glkpeitgvi shtdpgpvln evpqpgtdyp tsitsisksa saypsttivn
      301 ptivllqhnr eqqkrlssla dsvpdrlvsd kvdsallrdk paqetvpsek raveekrstv
      361 rsphymadts vddigiplrn tdrskdwykt mfkqihklnr dedsdsfspr ysysedsrtq
      421 vprsksemdn idsekvvkrs atlplpnras slksspertd weppdkkvdt rkyraeprsi
      481 ydyqpgkssv lnnekmtrdi speeidlkne pwykffsele fgkpppkkiw dytpgdcsil
      541 tredrksdle kdlylyqtel eadlekmekl ykaphkkpqk ntagvtplet stdhssysty
      601 spnyhavkre selvgdpaal enerqiyksv leggdipfqg lsglkrpsss astkdsespr
      661 hfapvdymet peeilrrryd dkeklledqr rlkreqeead iaarrhtgvi pthhqfitne
      721 rfgdllnvdd takrksgsem rparakfdfk aqtlkelplq kgdivyiykq idqnwlegeh
      781 hgrvgifpqs yieflppaek aqpkkplplq vleygdaiak fnfngdtqve msfrkgerit
      841 lirrvdenwy egrisgtsrq gifpvtyvev lkrpvvknai dypdppvsls psrsmtaspq
      901 qpqaqqqgas persqtprdi vsyqalysyt pqnddelelr dgdivdvmek cddgwfvgts
      961 rrtrqfgtfp gnyvkllyl
//
LOCUS       XP_041330089            1011 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbin and SH3 domain-containing protein 1 isoform X15 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330089
VERSION     XP_041330089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1011
                     /product="sorbin and SH3 domain-containing protein 1
                     isoform X15"
                     /calculated_mol_wt=113167
     Region          395..436
                     /region_name="Sorb"
                     /note="Sorbin homologous domain; cl02617"
                     /db_xref="CDD:470634"
     Region          773..827
                     /region_name="SH3_Sorbs1_1"
                     /note="First Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11919"
                     /db_xref="CDD:212852"
     Site            order(779,781,784,788,806..807,820,822..823)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212852"
     Region          847..904
                     /region_name="SH3_Sorbs1_2"
                     /note="Second Src Homology 3 domain of Sorbin and SH3
                     domain containing 1 (Sorbs1), also called ponsin; cd11922"
                     /db_xref="CDD:212855"
     Site            order(853,855,858,862,880..881,896,898..899)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212855"
     Region          952..1010
                     /region_name="SH3_Sorbs1_3"
                     /note="Third (or C-terminal) Src Homology 3 domain of
                     Sorbin and SH3 domain containing 1 (Sorbs1), also called
                     ponsin; cd11916"
                     /db_xref="CDD:212849"
     Site            order(959,961,964,968,986..987,1002,1004..1005)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212849"
     CDS             1..1011
                     /gene="SORBS1"
                     /coded_by="XM_041474155.1:104..3139"
                     /db_xref="GeneID:121357069"
ORIGIN      
        1 mapltekpel rhkqnpevek sspsatmsse heeidvaktv vnglssngqa kavdvplctr
       61 sisavkiipv kkvkssphlv lptemdptkv csgkgavtlr atpsyegnrn itspcpqdve
      121 qpenlepens etddwrsssn tdangdaqps slaakgyrsv rpnlssdskp qdatattsaq
      181 pgvivvpllq vnpdrqqegs sstpppplvp fgqgsvfpei vppgspltfp tlddfipphl
      241 qrgshhnqap stsgtlpsvy pklpffsspp slvppvtgal hrglkpeitg vishtdpgpv
      301 lnevpqpgtd yptsitsisk sasaypstti vnptivllqh nreqqkrlss ladsvpdrlv
      361 sdkvdsallr dkpaqetvps ekraveekrs tvrsphymad tsvddigipl rntdrskdwy
      421 ktmfkqihkl nrdedsdsfs prysysedsr tqvprsksem dnidsekvvk rsatlplpnr
      481 asslkssper tdweppdkkv dtrkyraepr siydyqpgks svlnnekmtr dispeeidlk
      541 nepwykffse lefgkpppkk iwdytpgdcs iltredrksd lekdlylyqt eleadlekme
      601 klykaphkkp qkntagvtpl etstdhssys tyspnyhavk reselvgdpa alenerqiyk
      661 svleggdipf qglsglkrps ssastkdses prhfapvdym etpeeilrrr yddkeklled
      721 qrrlkreqee adiaarrhtg vipthhqfit nerfgdllnv ddtakrksgs emrparakfd
      781 fkaqtlkelp lqkgdivyiy kqidqnwleg ehhgrvgifp qsyieflppa ekaqpkkplp
      841 lqvleygdai akfnfngdtq vemsfrkger itlirrvden wyegrisgts rqgifpvtyv
      901 evlkrpvvkn aidypdppvs lspsrsmtas pqqpqaqqqg aspersqtpr divsyqalys
      961 ytpqnddele lrdgdivdvm ekcddgwfvg tsrrtrqfgt fpgnyvklly l
//
LOCUS       XP_041330102            2190 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-15 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330102
VERSION     XP_041330102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2190
                     /product="protocadherin-15 isoform X1"
                     /calculated_mol_wt=240533
     Region          31..140
                     /region_name="ECD"
                     /note="Extracellular Cadherin domain; pfam18432"
                     /db_xref="CDD:408229"
     Region          152..260
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(158..159,221,223,257,259..260)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          305..393
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          399..505
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(406..407,470,472,501,503..504)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          513..609
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(520..521,572,574,607,609)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          621..713
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(627..628,677,679,709,711..712)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          724..815
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(729..730,778,780,811,813..814)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          823..921
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(830..831,881,883,918,920..921)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          931..1027
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <1064..1140
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1149..1243
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..2190
                     /gene="PCDH15"
                     /coded_by="XM_041474168.1:27..6599"
                     /db_xref="GeneID:121357128"
ORIGIN      
        1 mvqqlclwkw ftvgtalaav lawalaqnde dcklartgpp ativpidees rngtilvdnm
       61 likgtaggpd ptielslkdn vdywvildpi kqtlylnstg rvldrdppls iqsivvqvqc
      121 vnrkvgtiin hevrivvrdr ndnspqfqqq ryyvavnelt pvgttiftgf sgnngaidid
      181 dgpngqieyv iqynpndkts nrtfdipltl sgavvlrerl nyeektryfv ivqandraqn
      241 lnerrtsttt ltvdvldgdd lgpmflpcvl vnntrdcrpl tyqaslpelt dpahvnpisv
      301 tppiqaidqd rniqppsdrp gilysilvgt pedypqyfhm nlttaeltll kpinrdlhqk
      361 fdlvikaeqd nghplpafan lhieildenn qkpyftrsty egfilesspv gttisdsrnl
      421 tsplqvvvld ndveetkdpq lhlflndytt fftvtqsgit ryltllqpvd revqqlytfs
      481 mtasdgvqes vpvtvnimvi dandnsptfs nisynvkiyt dmkpgegvik ltavdadega
      541 ngqivyeila gdqgdftine htglitiapg vllavgrsya ltvrasdsap paqrrssitt
      601 vyievlppnn qspprfpqlm yslevseamr igavllnlqa fdregdpiky liqngdpqqv
      661 fnlsqssgll algkpldres tdryilivta sdgrpdgtst atvnivvtdv ndngpvfdmf
      721 lpknlsvqee eanafvgqvr atdadagvng qvhyslanfn nlfritsngs iytavklnre
      781 vrdhyelive atdgavdprr stltlaikvl diddnspvft nasytvcvpe nlppgtvflq
      841 leakdvdlga dvnyrirtee arqhfalnkh tgelslrksl dyesfsdtea tftflveafd
      901 skgtmppgla tvtvrvkdmn dyspefsqkl yrgmvapdav kgtvittvsa edrdppgtpa
      961 srvrykvdvv qfpysasifd veensgrvvt rvnlneepst vfklvviayd dgdpvkfntt
     1021 tveiavlqps viprftqdey rpppvsesap kgtvvtvvta aalnqtvvys ivsgneedvf
     1081 ainnrtgvis vkkpldyesv qsyelrvqad slqvvrsnlr vpsksntakv fievkdendh
     1141 apvftkkmyi ggvsedarmf ssvlkvkand kdtgnysamq yrliippikd gkegfvieay
     1201 tgliktamlf knmrrsyfkf qviatddygk glsskaevlv svvnqldmqv ivsnvpptlv
     1261 eqnkdqligi leryvqdqip gatvvvesig arrfgdgyse edytksdlmv yaidpqtnra
     1321 imrnelfkfl dgklldinke fqpylgqggr ileirtpdvv anvkkqaqav gytegallal
     1381 aviiilccmp ailivmvsyr qrqaecakta riqmalpagk pagaaannly eelgdstmrg
     1441 yaqqeqqqll rpsllrpeel smesgidpgq eyygqdyysy ehgyelpqyg srrrllspsg
     1501 mydeygevvv esdggyyysp hgpaaeegmi pvrgppsrgi sqaagpqmeg gpvgvgmdls
     1561 rgpgrgfrss qgkrrlkgvm hlsrvavsah kpvgraesah srwkkakifp milqkvkgrk
     1621 dssyakllsa rqadgdkpmm irgsyfqkst ddrpsmrkln hmlkrisvsk kfqeglgkdl
     1681 argeegserd eaksgvsisi taeseqedsd hekrrkkrrr rtsdesseks sssgsesedk
     1741 dylkitldqd eatestvdsd eetadvgdsd edsessssse seedsseedd deedsesded
     1801 gslskssstr ssysrsgtse sssrrstdms svksragssr gkrssqksvs stasgsdrdt
     1861 sykktsgssy ksktssasve iedtieevse eeeeaeetad ssnkavskta nakaaaaggg
     1921 kggqsaapge dseeesedev dpedsdredt asknesscld seisvtskgt tgtkssgsat
     1981 sgktatspet etqssdtnrk gmktrkkwak kkriklvvdp eyetsstgee sapdssqrnr
     2041 lsnpafqpng ssniyvaqng svvrtrracl gnnlkvaspv rlgkqfkkld klavtheesv
     2101 plntlskgps psdkmnsrpc svsfsstiga esvvtkvgaa klkstdeqes vvdheevkep
     2161 leshsehtqs deeelwmgpw nnlhipmtkl
//
LOCUS       XP_041330112            2042 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-15 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330112
VERSION     XP_041330112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474178.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2042
                     /product="protocadherin-15 isoform X2"
                     /calculated_mol_wt=224042
     Region          31..140
                     /region_name="ECD"
                     /note="Extracellular Cadherin domain; pfam18432"
                     /db_xref="CDD:408229"
     Region          152..260
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(158..159,221,223,257,259..260)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          305..393
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          399..505
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(406..407,470,472,501,503..504)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          513..609
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(520..521,572,574,607,609)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          621..713
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(627..628,677,679,709,711..712)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          724..815
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(729..730,778,780,811,813..814)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          823..921
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(830..831,881,883,918,920..921)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          931..1027
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <1064..1140
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1149..1243
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..2042
                     /gene="PCDH15"
                     /coded_by="XM_041474178.1:27..6155"
                     /db_xref="GeneID:121357128"
ORIGIN      
        1 mvqqlclwkw ftvgtalaav lawalaqnde dcklartgpp ativpidees rngtilvdnm
       61 likgtaggpd ptielslkdn vdywvildpi kqtlylnstg rvldrdppls iqsivvqvqc
      121 vnrkvgtiin hevrivvrdr ndnspqfqqq ryyvavnelt pvgttiftgf sgnngaidid
      181 dgpngqieyv iqynpndkts nrtfdipltl sgavvlrerl nyeektryfv ivqandraqn
      241 lnerrtsttt ltvdvldgdd lgpmflpcvl vnntrdcrpl tyqaslpelt dpahvnpisv
      301 tppiqaidqd rniqppsdrp gilysilvgt pedypqyfhm nlttaeltll kpinrdlhqk
      361 fdlvikaeqd nghplpafan lhieildenn qkpyftrsty egfilesspv gttisdsrnl
      421 tsplqvvvld ndveetkdpq lhlflndytt fftvtqsgit ryltllqpvd revqqlytfs
      481 mtasdgvqes vpvtvnimvi dandnsptfs nisynvkiyt dmkpgegvik ltavdadega
      541 ngqivyeila gdqgdftine htglitiapg vllavgrsya ltvrasdsap paqrrssitt
      601 vyievlppnn qspprfpqlm yslevseamr igavllnlqa fdregdpiky liqngdpqqv
      661 fnlsqssgll algkpldres tdryilivta sdgrpdgtst atvnivvtdv ndngpvfdmf
      721 lpknlsvqee eanafvgqvr atdadagvng qvhyslanfn nlfritsngs iytavklnre
      781 vrdhyelive atdgavdprr stltlaikvl diddnspvft nasytvcvpe nlppgtvflq
      841 leakdvdlga dvnyrirtee arqhfalnkh tgelslrksl dyesfsdtea tftflveafd
      901 skgtmppgla tvtvrvkdmn dyspefsqkl yrgmvapdav kgtvittvsa edrdppgtpa
      961 srvrykvdvv qfpysasifd veensgrvvt rvnlneepst vfklvviayd dgdpvkfntt
     1021 tveiavlqps viprftqdey rpppvsesap kgtvvtvvta aalnqtvvys ivsgneedvf
     1081 ainnrtgvis vkkpldyesv qsyelrvqad slqvvrsnlr vpsksntakv fievkdendh
     1141 apvftkkmyi ggvsedarmf ssvlkvkand kdtgnysamq yrliippikd gkegfvieay
     1201 tgliktamlf knmrrsyfkf qviatddygk glsskaevlv svvnqldmqv ivsnvpptlv
     1261 eqnkdqligi leryvqdqip gatvvvesig arrfgdgyse edytksdlmv yaidpqtnra
     1321 imrnelfkfl dgklldinke fqpylgqggr ileirtpdvv anvkkqaqav gytegallal
     1381 aviiilccmp ailivmvsyr qrqaecakta riqmalpagk pagaaannly eelgdstmrg
     1441 yaqqeqqqll rpsllrpeel smesgidpgq eyygqdyysy ehgyelpqyg srrrllspsg
     1501 mydeygevvv esdggyyysp hgpaaeegmi pvrgppsrgi sqaagpqmeg gpvgvgmdls
     1561 rgpgrgfrss qgkrrlkgvm hlsrvavsah kpvgraesah srwkkakifp milqkvkgrk
     1621 dssyakllsa rqadgdkpmm irgsyfqkst ddrpsmrkln hmlkrisvsk kfqeglgkdl
     1681 argeegserd eaksgvsisi taeseqedsd hekrrkkrrr rtsdesseks sssgsesedk
     1741 dylkitldqd eatestvdsd eetadvgdsd edsessssse seedsseedd deedsesded
     1801 gslskssstr ssysrsgtse sssrrstdms svksragssr gkrssqksvs stasgsdrdt
     1861 sykktsgssy ksktssasve iedtieevse eeeeaeetad ssnkavskta nakaaaaggg
     1921 kggqsaapge dseeesedev dpedsdredt asknesscld seisvtskgt tgtkssgsat
     1981 sgktatspet etqssdtnrk gmktrkkvsq essqsqsdep lvgqkeedqv gggpgvrdql
     2041 hg
//
LOCUS       XP_041330119            1908 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-15 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041330119
VERSION     XP_041330119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1908
                     /product="protocadherin-15 isoform X3"
                     /calculated_mol_wt=209726
     Region          31..140
                     /region_name="ECD"
                     /note="Extracellular Cadherin domain; pfam18432"
                     /db_xref="CDD:408229"
     Region          152..260
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(158..159,221,223,257,259..260)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          305..393
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          399..505
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(406..407,470,472,501,503..504)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          513..609
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(520..521,572,574,607,609)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          621..713
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(627..628,677,679,709,711..712)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          724..815
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(729..730,778,780,811,813..814)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          823..921
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(830..831,881,883,918,920..921)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          931..1027
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <1064..1140
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1149..1243
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..1908
                     /gene="PCDH15"
                     /coded_by="XM_041474185.1:27..5753"
                     /db_xref="GeneID:121357128"
ORIGIN      
        1 mvqqlclwkw ftvgtalaav lawalaqnde dcklartgpp ativpidees rngtilvdnm
       61 likgtaggpd ptielslkdn vdywvildpi kqtlylnstg rvldrdppls iqsivvqvqc
      121 vnrkvgtiin hevrivvrdr ndnspqfqqq ryyvavnelt pvgttiftgf sgnngaidid
      181 dgpngqieyv iqynpndkts nrtfdipltl sgavvlrerl nyeektryfv ivqandraqn
      241 lnerrtsttt ltvdvldgdd lgpmflpcvl vnntrdcrpl tyqaslpelt dpahvnpisv
      301 tppiqaidqd rniqppsdrp gilysilvgt pedypqyfhm nlttaeltll kpinrdlhqk
      361 fdlvikaeqd nghplpafan lhieildenn qkpyftrsty egfilesspv gttisdsrnl
      421 tsplqvvvld ndveetkdpq lhlflndytt fftvtqsgit ryltllqpvd revqqlytfs
      481 mtasdgvqes vpvtvnimvi dandnsptfs nisynvkiyt dmkpgegvik ltavdadega
      541 ngqivyeila gdqgdftine htglitiapg vllavgrsya ltvrasdsap paqrrssitt
      601 vyievlppnn qspprfpqlm yslevseamr igavllnlqa fdregdpiky liqngdpqqv
      661 fnlsqssgll algkpldres tdryilivta sdgrpdgtst atvnivvtdv ndngpvfdmf
      721 lpknlsvqee eanafvgqvr atdadagvng qvhyslanfn nlfritsngs iytavklnre
      781 vrdhyelive atdgavdprr stltlaikvl diddnspvft nasytvcvpe nlppgtvflq
      841 leakdvdlga dvnyrirtee arqhfalnkh tgelslrksl dyesfsdtea tftflveafd
      901 skgtmppgla tvtvrvkdmn dyspefsqkl yrgmvapdav kgtvittvsa edrdppgtpa
      961 srvrykvdvv qfpysasifd veensgrvvt rvnlneepst vfklvviayd dgdpvkfntt
     1021 tveiavlqps viprftqdey rpppvsesap kgtvvtvvta aalnqtvvys ivsgneedvf
     1081 ainnrtgvis vkkpldyesv qsyelrvqad slqvvrsnlr vpsksntakv fievkdendh
     1141 apvftkkmyi ggvsedarmf ssvlkvkand kdtgnysamq yrliippikd gkegfvieay
     1201 tgliktamlf knmrrsyfkf qviatddygk glsskaevlv svvnqldmqv ivsnvpptlv
     1261 eqnkdqligi leryvqdqip gatvvvesig arrfgdgyse edytksdlmv yaidpqtnra
     1321 imrnelfkfl dgklldinke fqpylgqggr ileirtpdvv anvkkqaqav gytegallal
     1381 aviiilccmp ailivmvsyr qrqaecakta riqmalpagk pagaaannly eelgdstilf
     1441 llyhfqqsrg kksvleegdr qrvissfasr aieahkqsni ngslnnnlpk sssnitflsd
     1501 enplttrnpl yveglpqspt asvflrkrnd tldtlspssl awreasfggs hrawtvpthl
     1561 srrhmsgsla rpvimdpiqw qqqrltakqe gaenpdssdd issplfqkis gpkltvkeka
     1621 rqfealqemk qvrspevksa rspthsasvq egesvpeqsp ksvvasprlr ssplssptpc
     1681 aegveaeatl vpavivthhd npqehspppt rkptppssri kkplcqsfla pqtkenvesi
     1741 pdppkipppp ppqlppplpp pppsppllpp hpppppavsl psssssssss psplstqlls
     1801 pakhskspak qpavptpaav pelpprrelk gilkniqnla aieksvanmy sqidknhllp
     1861 khvpklkpas tpelptpeaa aehnqqngnl ssvveelekr fpsqstal
//
LOCUS       XP_041330126            1710 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-15 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041330126
VERSION     XP_041330126.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474192.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1710
                     /product="protocadherin-15 isoform X4"
                     /calculated_mol_wt=189213
     Region          31..140
                     /region_name="ECD"
                     /note="Extracellular Cadherin domain; pfam18432"
                     /db_xref="CDD:408229"
     Region          152..260
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(158..159,221,223,257,259..260)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          305..393
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          399..505
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(406..407,470,472,501,503..504)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          513..609
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(520..521,572,574,607,609)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          621..713
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(627..628,677,679,709,711..712)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          724..815
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(729..730,778,780,811,813..814)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          823..921
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(830..831,881,883,918,920..921)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          931..1027
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          <1064..1140
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1149..1243
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..1710
                     /gene="PCDH15"
                     /coded_by="XM_041474192.1:27..5159"
                     /db_xref="GeneID:121357128"
ORIGIN      
        1 mvqqlclwkw ftvgtalaav lawalaqnde dcklartgpp ativpidees rngtilvdnm
       61 likgtaggpd ptielslkdn vdywvildpi kqtlylnstg rvldrdppls iqsivvqvqc
      121 vnrkvgtiin hevrivvrdr ndnspqfqqq ryyvavnelt pvgttiftgf sgnngaidid
      181 dgpngqieyv iqynpndkts nrtfdipltl sgavvlrerl nyeektryfv ivqandraqn
      241 lnerrtsttt ltvdvldgdd lgpmflpcvl vnntrdcrpl tyqaslpelt dpahvnpisv
      301 tppiqaidqd rniqppsdrp gilysilvgt pedypqyfhm nlttaeltll kpinrdlhqk
      361 fdlvikaeqd nghplpafan lhieildenn qkpyftrsty egfilesspv gttisdsrnl
      421 tsplqvvvld ndveetkdpq lhlflndytt fftvtqsgit ryltllqpvd revqqlytfs
      481 mtasdgvqes vpvtvnimvi dandnsptfs nisynvkiyt dmkpgegvik ltavdadega
      541 ngqivyeila gdqgdftine htglitiapg vllavgrsya ltvrasdsap paqrrssitt
      601 vyievlppnn qspprfpqlm yslevseamr igavllnlqa fdregdpiky liqngdpqqv
      661 fnlsqssgll algkpldres tdryilivta sdgrpdgtst atvnivvtdv ndngpvfdmf
      721 lpknlsvqee eanafvgqvr atdadagvng qvhyslanfn nlfritsngs iytavklnre
      781 vrdhyelive atdgavdprr stltlaikvl diddnspvft nasytvcvpe nlppgtvflq
      841 leakdvdlga dvnyrirtee arqhfalnkh tgelslrksl dyesfsdtea tftflveafd
      901 skgtmppgla tvtvrvkdmn dyspefsqkl yrgmvapdav kgtvittvsa edrdppgtpa
      961 srvrykvdvv qfpysasifd veensgrvvt rvnlneepst vfklvviayd dgdpvkfntt
     1021 tveiavlqps viprftqdey rpppvsesap kgtvvtvvta aalnqtvvys ivsgneedvf
     1081 ainnrtgvis vkkpldyesv qsyelrvqad slqvvrsnlr vpsksntakv fievkdendh
     1141 apvftkkmyi ggvsedarmf ssvlkvkand kdtgnysamq yrliippikd gkegfvieay
     1201 tgliktamlf knmrrsyfkf qviatddygk glsskaevlv svvnqldmqv ivsnvpptlv
     1261 eqnkdqligi leryvqdqip gatvvvesig arrfgdgyse edytksdlmv yaidpqtnra
     1321 imrnelfkfl dgklldinke fqpylgqggr ileirtpdvv anvkkqaqav gytegallal
     1381 aviiilccmp ailivmvsyr qrqaecakta riqmalpagk pagaaannly eelgdstmrg
     1441 yaqqeqqqll rpsllrpeel smesgidpgq eyygqdyysy ehgyelpqyg srrrllspsg
     1501 mydeygevvv esdggyyysp hgpaaeewak kkriklvvdp eyetsstgee sapdssqrnr
     1561 lsnpafqpng ssniyvaqng svvrtrracl gnnlkvaspv rlgkqfkkld klavtheesv
     1621 plntlskgps psdkmnsrpc svsfsstiga esvvtkvgaa klkstdeqes vvdheevkep
     1681 leshsehtqs deeelwmgpw nnlhipmtkl
//
LOCUS       XP_041330136            1402 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerase III subunit RPC1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330136
VERSION     XP_041330136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1402
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1402
                     /product="DNA-directed RNA polymerase III subunit RPC1
                     isoform X1"
                     /calculated_mol_wt=156976
     Region          24..891
                     /region_name="RNAP_III_RPC1_N"
                     /note="Largest subunit (RPC1) of eukaryotic RNA polymerase
                     III (RNAP III), N-terminal domain; cd02583"
                     /db_xref="CDD:259847"
     Site            order(69,72,79,82)
                     /site_type="other"
                     /note="Zn-binding [ion binding]"
                     /db_xref="CDD:259847"
     Site            order(348,353,360,366)
                     /site_type="active"
                     /note="putative active site region [active]"
                     /db_xref="CDD:259847"
     Region          1033..1372
                     /region_name="RNAP_III_Rpc1_C"
                     /note="Largest subunit (Rpc1) of Eukaryotic RNA polymerase
                     III (RNAP III), C-terminal domain; cd02736"
                     /db_xref="CDD:132723"
     Site            order(1035..1036,1040,1043,1369,1372)
                     /site_type="other"
                     /note="Rpb1 (Rpc1) - Rpb6 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132723"
     Site            order(1040..1101,1106..1120,1215..1226,1235..1288,
                     1291..1323,1326)
                     /site_type="active"
                     /note="cleft [active]"
                     /db_xref="CDD:132723"
     Site            order(1044,1047,1341,1351..1353,1359..1360,1362,1364,1369)
                     /site_type="other"
                     /note="Rpb1 (Rpc1) - Rpb2 (Rpc2) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:132723"
     Site            order(1089,1317,1334..1335,1338)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:132723"
     Site            order(1249,1255..1256,1258,1268..1274,1276,1296,
                     1307..1308,1310)
                     /site_type="other"
                     /note="Rpb1 (Rpc1) - Rpb5 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132723"
     Site            1326..1367
                     /site_type="active"
                     /note="clamp [active]"
                     /db_xref="CDD:132723"
     CDS             1..1402
                     /gene="POLR3A"
                     /coded_by="XM_041474202.1:485..4693"
                     /db_xref="GeneID:121357146"
ORIGIN      
        1 mvkeqfretd vakkishicf gmkspeemrq qahiqvvskn lysqdnhhsp lqygvldhrm
       61 gtsekdrpce tcgksladcl ghygyidlel pcfhvgyfka vigilqmick tccrimlsve
      121 ekkqfldylk rpgltylqkr glkkkvsekc rkkntcpycg afngtvkkcg llkiihekyk
      181 tnkkvvdpiv stflqsfeta ieynkevepl lgraqenlnp lvvlnlfkri pvediplllm
      241 npqagkpsdl iltrllvppl cirpsvvsdl ksgtneddlt mklteiifln dvikkhrisg
      301 aktqmimedw dflqlqcaly inselsgipl nmapkkwtrg fvqrlkgkqg rfrgnlsgkr
      361 vdfsgrtvis pdpnlridev avpihvakil tfpekvnkan infmrklvcn gpdvhpganf
      421 iqqrhtqmkr flkygnrekm aqelkfgdiv erhlidgdiv lfnrqpslhk lsimahiarv
      481 kphrtfrfne cvctpynadf dgdemnlhlp qteeakaeal vlmgtkanlv tprngeplia
      541 aiqdfltgay lltlkdtffd rakacqiias ilvgkdekik vrlpppailk pvtlwtgkqv
      601 fslilkpsdd cpvkanlrtk gkqycgkged lcyndsyvti qnselmsgsm dkgtlgsgsk
      661 nnifyillrd wgqveaadam srlarlapvy lsnrgfsigi gdvtpgqgll kakyellnag
      721 ykkcdeyiea lntgklqqqp gctaeetlea lilkelsvir dhagsaclre ldksnsplim
      781 alcgskgsfi nisqmiacvg qqaisgsrvp dgfenrslph fekhsklpaa kgfvansfys
      841 gltptefffh tmagreglvd tavktaetgy mqrrlvksle dlcsqydltv rsstgdiiqf
      901 iyggdgldpa amegkdeple fkrvldnira vypcrsepal sknelvltse simkkneflc
      961 cqdsflqtlt etgyekynee ikkfikgvse kikktrdkyg indngttepr vlyqldritp
     1021 tqlekfletc rdkymraqme pgsavgalca qsigepgtqm tlktfhfagv asmnitlgvp
     1081 rikeiinask aistpiitaq ldkdddpdfa rlvkgriekt llgeiseyie evflpddcfi
     1141 lvklslerir llrlevnaet vrysicvskl rvkpgdvavh geavvcvtpr enskssmyyv
     1201 lqslkeelpk vvvqgipevs ravihvdeqs gkekykllve gdnlravmat hgvkgtktss
     1261 nntyevektl gieaarttii neiqytmvnh gmsidrrhvm llsdlmtykg evlgitrfgl
     1321 akmkesvlml asfektadhl fdaayfgqkd svcgvsecii mgipmnigtg lfkllhkadk
     1381 estpprrpli fdhnefhipi vt
//
LOCUS       XP_041330144            1390 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerase III subunit RPC1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330144
VERSION     XP_041330144.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474210.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1390
                     /product="DNA-directed RNA polymerase III subunit RPC1
                     isoform X2"
                     /calculated_mol_wt=155547
     Region          24..891
                     /region_name="RNAP_III_RPC1_N"
                     /note="Largest subunit (RPC1) of eukaryotic RNA polymerase
                     III (RNAP III), N-terminal domain; cd02583"
                     /db_xref="CDD:259847"
     Site            order(69,72,79,82)
                     /site_type="other"
                     /note="Zn-binding [ion binding]"
                     /db_xref="CDD:259847"
     Site            order(348,353,360,366)
                     /site_type="active"
                     /note="putative active site region [active]"
                     /db_xref="CDD:259847"
     Region          841..>1058
                     /region_name="rpoC2"
                     /note="RNA polymerase beta'' subunit; Reviewed; CHL00117"
                     /db_xref="CDD:214368"
     Region          1021..1360
                     /region_name="RNAP_III_Rpc1_C"
                     /note="Largest subunit (Rpc1) of Eukaryotic RNA polymerase
                     III (RNAP III), C-terminal domain; cd02736"
                     /db_xref="CDD:132723"
     Site            order(1023..1024,1028,1031,1357,1360)
                     /site_type="other"
                     /note="Rpb1 (Rpc1) - Rpb6 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132723"
     Site            order(1028..1089,1094..1108,1203..1214,1223..1276,
                     1279..1311,1314)
                     /site_type="active"
                     /note="cleft [active]"
                     /db_xref="CDD:132723"
     Site            order(1032,1035,1329,1339..1341,1347..1348,1350,1352,1357)
                     /site_type="other"
                     /note="Rpb1 (Rpc1) - Rpb2 (Rpc2) interaction site
                     [polypeptide binding]"
                     /db_xref="CDD:132723"
     Site            order(1077,1305,1322..1323,1326)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:132723"
     Site            order(1237,1243..1244,1246,1256..1262,1264,1284,
                     1295..1296,1298)
                     /site_type="other"
                     /note="Rpb1 (Rpc1) - Rpb5 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:132723"
     Site            1314..1355
                     /site_type="active"
                     /note="clamp [active]"
                     /db_xref="CDD:132723"
     CDS             1..1390
                     /gene="POLR3A"
                     /coded_by="XM_041474210.1:485..4657"
                     /db_xref="GeneID:121357146"
ORIGIN      
        1 mvkeqfretd vakkishicf gmkspeemrq qahiqvvskn lysqdnhhsp lqygvldhrm
       61 gtsekdrpce tcgksladcl ghygyidlel pcfhvgyfka vigilqmick tccrimlsve
      121 ekkqfldylk rpgltylqkr glkkkvsekc rkkntcpycg afngtvkkcg llkiihekyk
      181 tnkkvvdpiv stflqsfeta ieynkevepl lgraqenlnp lvvlnlfkri pvediplllm
      241 npqagkpsdl iltrllvppl cirpsvvsdl ksgtneddlt mklteiifln dvikkhrisg
      301 aktqmimedw dflqlqcaly inselsgipl nmapkkwtrg fvqrlkgkqg rfrgnlsgkr
      361 vdfsgrtvis pdpnlridev avpihvakil tfpekvnkan infmrklvcn gpdvhpganf
      421 iqqrhtqmkr flkygnrekm aqelkfgdiv erhlidgdiv lfnrqpslhk lsimahiarv
      481 kphrtfrfne cvctpynadf dgdemnlhlp qteeakaeal vlmgtkanlv tprngeplia
      541 aiqdfltgay lltlkdtffd rakacqiias ilvgkdekik vrlpppailk pvtlwtgkqv
      601 fslilkpsdd cpvkanlrtk gkqycgkged lcyndsyvti qnselmsgsm dkgtlgsgsk
      661 nnifyillrd wgqveaadam srlarlapvy lsnrgfsigi gdvtpgqgll kakyellnag
      721 ykkcdeyiea lntgklqqqp gctaeetlea lilkelsvir dhagsaclre ldksnsplim
      781 alcgskgsfi nisqmiacvg qqaisgsrvp dgfenrslph fekhsklpaa kgfvansfys
      841 gltptefffh tmagreglvd tavktaetgy mqrrlvksle dlcsqydltv rsstgdiiqf
      901 iyggdgldpa amegkdeple fkrvldnira vypcrsepal sknelvltse simkkneflc
      961 cqdsflqeik kfikgvseki kktrdkygin dngtteprvl yqldritptq lekfletcrd
     1021 kymraqmepg savgalcaqs igepgtqmtl ktfhfagvas mnitlgvpri keiinaskai
     1081 stpiitaqld kdddpdfarl vkgriektll geiseyieev flpddcfilv klslerirll
     1141 rlevnaetvr ysicvsklrv kpgdvavhge avvcvtpren skssmyyvlq slkeelpkvv
     1201 vqgipevsra vihvdeqsgk ekykllvegd nlravmathg vkgtktssnn tyevektlgi
     1261 eaarttiine iqytmvnhgm sidrrhvmll sdlmtykgev lgitrfglak mkesvlmlas
     1321 fektadhlfd aayfgqkdsv cgvseciimg ipmnigtglf kllhkadkes tpprrplifd
     1381 hnefhipivt
//
LOCUS       XP_041330153            1173 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec24C isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330153
VERSION     XP_041330153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1173
                     /product="protein transport protein Sec24C isoform X1"
                     /calculated_mol_wt=127329
     Region          <5..>318
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          293..1169
                     /region_name="COG5028"
                     /note="Vesicle coat complex COPII, subunit SEC24/subunit
                     SFB2/subunit SFB3 [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227361"
     CDS             1..1173
                     /gene="SEC24C"
                     /coded_by="XM_041474219.1:125..3646"
                     /db_xref="GeneID:121357158"
ORIGIN      
        1 msvnqqahag ppygqpqpgy qgyqqpaygg qslpgapqsq ygayngpmpg yqqpvppqgy
       61 fpslgfpskg spvslnsdts slapnfigsl rapptsgapp pasgashpsg hvaysqfehg
      121 dvqngipasa apmqrppasq pflpgsaptp vsqmstfqqy gppqasvqql rnhmagmtig
      181 staasapppa glgyasvppv sgsfsatgsg lytpssasqg ppltsvsqgl plaqppfpgq
      241 tiptqrlptq vpgftpppps tgvgpssypp ttgaprppam pgpplpgqtv agppssqpnh
      301 vssppppstm aglhpgppms glhgppppth ppqpgyqmqq ngsfgqmrgp qpnyggaypg
      361 apnygsppgp ppppkrldpd sipspqlnel ppqqkprhri dpdaipspiq vieddrnnrg
      421 sepfvtgvrg qvpplvttnf mvkdqgnasp ryirctsyni pctsdmakqs qvplaavikp
      481 latlppeetl pylvdhgesg pvrcnrckay mcpfmqfieg grrfqccfcs cvtevpphyf
      541 qhldhtgkrv dfydrpelsl gsyeflatvd ycknnkfpsp pafifmidvs ynavksglvr
      601 liceelksll dylpregnme esairvgfvt ynkvlhfynv ksslaqpqmm vvsdvadmfv
      661 plldgflvnv nesrtviasl ldqipemfad tretetvfap viqaglealk aaecagklfi
      721 fhtslpiaea pgklknrddr klintdkekt lfqpqtsfyn nlakdcvaqg ccvdlflfpn
      781 qyldvatlgv vpyqtggsiy kyayfqletd qyrflndlrr dvqkevgfda vmrvrtstgi
      841 ratdffgafy msnttdvema gldcdktitv efkhddklse dsgallqcal lytscagqrr
      901 lrihnlslnc ctqladlyrn cetdtlinyl akyayrgvls spvktvrdal inqcaqilac
      961 yrkncaspss agqlilpecm kllpvylncv lksdvlqpgp evttddrayi rqlvtsmdva
     1021 etnvffyprl lpltkadvds dslpaairns eerlskgdiy llenglnifv wvgvnvqqgl
     1081 iqnlfgvssf sqisnalstl pvlenpfskk vrsivdmlqg qrsrymklii vkqedkleml
     1141 fkhflvedks lsggasyvdf lchmhkeirq lls
//
LOCUS       XP_041330159            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec24C isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330159
VERSION     XP_041330159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="protein transport protein Sec24C isoform X2"
                     /calculated_mol_wt=124700
     Region          <5..>318
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          293..1146
                     /region_name="COG5028"
                     /note="Vesicle coat complex COPII, subunit SEC24/subunit
                     SFB2/subunit SFB3 [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227361"
     CDS             1..1150
                     /gene="SEC24C"
                     /coded_by="XM_041474225.1:125..3577"
                     /db_xref="GeneID:121357158"
ORIGIN      
        1 msvnqqahag ppygqpqpgy qgyqqpaygg qslpgapqsq ygayngpmpg yqqpvppqgy
       61 fpslgfpskg spvslnsdts slapnfigsl rapptsgapp pasgashpsg hvaysqfehg
      121 dvqngipasa apmqrppasq pflpgsaptp vsqmstfqqy gppqasvqql rnhmagmtig
      181 staasapppa glgyasvppv sgsfsatgsg lytpssasqg ppltsvsqgl plaqppfpgq
      241 tiptqrlptq vpgftpppps tgvgpssypp ttgaprppam pgpplpgqtv agppssqpnh
      301 vssppppstm aglhpgppms glhgppppth ppqpgyqmqq ngsfgqmrgp qpnyggaypg
      361 apnygsppgp ppppkrldpd sipspiqvie ddrnnrgsep fvtgvrgqvp plvttnfmvk
      421 dqgnaspryi rctsynipct sdmakqsqvp laavikplat lppeetlpyl vdhgesgpvr
      481 cnrckaymcp fmqfieggrr fqccfcscvt evpphyfqhl dhtgkrvdfy drpelslgsy
      541 eflatvdyck nnkfpsppaf ifmidvsyna vksglvrlic eelkslldyl pregnmeesa
      601 irvgfvtynk vlhfynvkss laqpqmmvvs dvadmfvpll dgflvnvnes rtviaslldq
      661 ipemfadtre tetvfapviq aglealkaae cagklfifht slpiaeapgk lknrddrkli
      721 ntdkektlfq pqtsfynnla kdcvaqgccv dlflfpnqyl dvatlgvvpy qtggsiykya
      781 yfqletdqyr flndlrrdvq kevgfdavmr vrtstgirat dffgafymsn ttdvemagld
      841 cdktitvefk hddklsedsg allqcallyt scagqrrlri hnlslncctq ladlyrncet
      901 dtlinylaky ayrgvlsspv ktvrdalinq caqilacyrk ncaspssagq lilpecmkll
      961 pvylncvlks dvlqpgpevt tddrayirql vtsmdvaetn vffyprllpl tkadvdsdsl
     1021 paairnseer lskgdiylle nglnifvwvg vnvqqgliqn lfgvssfsqi snalstlpvl
     1081 enpfskkvrs ivdmlqgqrs rymkliivkq edklemlfkh flvedkslsg gasyvdflch
     1141 mhkeirqlls
//
LOCUS       XP_041330168            1144 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec24C isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330168
VERSION     XP_041330168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474234.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1144
                     /product="protein transport protein Sec24C isoform X3"
                     /calculated_mol_wt=124359
     Region          <5..>289
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          264..1140
                     /region_name="COG5028"
                     /note="Vesicle coat complex COPII, subunit SEC24/subunit
                     SFB2/subunit SFB3 [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227361"
     CDS             1..1144
                     /gene="SEC24C"
                     /coded_by="XM_041474234.1:125..3559"
                     /db_xref="GeneID:121357158"
ORIGIN      
        1 msvnqqahag ppygqpqpgy qgyqqpaygg qslpgapqsq ygayngpmpg yqqpvppqgs
       61 lrapptsgap ppasgashps ghvaysqfeh gdvqngipas aapmqrppas qpflpgsapt
      121 pvsqmstfqq ygppqasvqq lrnhmagmti gstaasappp aglgyasvpp vsgsfsatgs
      181 glytpssasq gppltsvsqg lplaqppfpg qtiptqrlpt qvpgftpppp stgvgpssyp
      241 pttgaprppa mpgpplpgqt vagppssqpn hvssppppst maglhpgppm sglhgppppt
      301 hppqpgyqmq qngsfgqmrg pqpnyggayp gapnygsppg pppppkrldp dsipspqlne
      361 lppqqkprhr idpdaipspi qvieddrnnr gsepfvtgvr gqvpplvttn fmvkdqgnas
      421 pryirctsyn ipctsdmakq sqvplaavik platlppeet lpylvdhges gpvrcnrcka
      481 ymcpfmqfie ggrrfqccfc scvtevpphy fqhldhtgkr vdfydrpels lgsyeflatv
      541 dycknnkfps ppafifmidv synavksglv rliceelksl ldylpregnm eesairvgfv
      601 tynkvlhfyn vksslaqpqm mvvsdvadmf vplldgflvn vnesrtvias lldqipemfa
      661 dtretetvfa pviqagleal kaaecagklf ifhtslpiae apgklknrdd rklintdkek
      721 tlfqpqtsfy nnlakdcvaq gccvdlflfp nqyldvatlg vvpyqtggsi ykyayfqlet
      781 dqyrflndlr rdvqkevgfd avmrvrtstg iratdffgaf ymsnttdvem agldcdktit
      841 vefkhddkls edsgallqca llytscagqr rlrihnlsln cctqladlyr ncetdtliny
      901 lakyayrgvl sspvktvrda linqcaqila cyrkncasps sagqlilpec mkllpvylnc
      961 vlksdvlqpg pevttddray irqlvtsmdv aetnvffypr llpltkadvd sdslpaairn
     1021 seerlskgdi yllenglnif vwvgvnvqqg liqnlfgvss fsqisnalst lpvlenpfsk
     1081 kvrsivdmlq gqrsrymkli ivkqedklem lfkhflvedk slsggasyvd flchmhkeir
     1141 qlls
//
LOCUS       XP_041330176            1106 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec24C isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330176
VERSION     XP_041330176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474242.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1106
                     /product="protein transport protein Sec24C isoform X4"
                     /calculated_mol_wt=120719
     Region          <5..>250
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          325..1102
                     /region_name="COG5028"
                     /note="Vesicle coat complex COPII, subunit SEC24/subunit
                     SFB2/subunit SFB3 [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227361"
     CDS             1..1106
                     /gene="SEC24C"
                     /coded_by="XM_041474242.1:125..3445"
                     /db_xref="GeneID:121357158"
ORIGIN      
        1 msvnqqahag ppygqpqpgy qgyqqpaygg qslpgapqsq ygayngpmpg yqqpvppqgy
       61 fpslgfpskg spvslnsdts slapnfigsl rapptsgapp pasgashpsg hvaysqfehg
      121 dvqngipasa apmqrppasq pflpgsaptp vsqmstfqqy gppqasvqql rnhmagmtig
      181 staasapppa glgygvgpss yppttgaprp pampgpplpg qtvagppssq pnhvsspppp
      241 stmaglhpgp pmsglhgppp pthppqpgyq mqqngsfgqm rgpqpnygga ypgapnygsp
      301 pgpppppkrl dpdsipspql nelppqqkpr hridpdaips piqvieddrn nrgsepfvtg
      361 vrgqvpplvt tnfmvkdqgn aspryircts ynipctsdma kqsqvplaav ikplatlppe
      421 etlpylvdhg esgpvrcnrc kaymcpfmqf ieggrrfqcc fcscvtevpp hyfqhldhtg
      481 krvdfydrpe lslgsyefla tvdycknnkf psppafifmi dvsynavksg lvrliceelk
      541 slldylpreg nmeesairvg fvtynkvlhf ynvksslaqp qmmvvsdvad mfvplldgfl
      601 vnvnesrtvi aslldqipem fadtretetv fapviqagle alkaaecagk lfifhtslpi
      661 aeapgklknr ddrklintdk ektlfqpqts fynnlakdcv aqgccvdlfl fpnqyldvat
      721 lgvvpyqtgg siykyayfql etdqyrflnd lrrdvqkevg fdavmrvrts tgiratdffg
      781 afymsnttdv emagldcdkt itvefkhddk lsedsgallq callytscag qrrlrihnls
      841 lncctqladl yrncetdtli nylakyayrg vlsspvktvr dalinqcaqi lacyrkncas
      901 pssagqlilp ecmkllpvyl ncvlksdvlq pgpevttddr ayirqlvtsm dvaetnvffy
      961 prllpltkad vdsdslpaai rnseerlskg diyllengln ifvwvgvnvq qgliqnlfgv
     1021 ssfsqisnal stlpvlenpf skkvrsivdm lqgqrsrymk liivkqedkl emlfkhflve
     1081 dkslsggasy vdflchmhke irqlls
//
LOCUS       XP_041330186            1095 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec24C isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330186
VERSION     XP_041330186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1095
                     /product="protein transport protein Sec24C isoform X5"
                     /calculated_mol_wt=119675
     Region          <5..>239
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          314..1091
                     /region_name="COG5028"
                     /note="Vesicle coat complex COPII, subunit SEC24/subunit
                     SFB2/subunit SFB3 [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227361"
     CDS             1..1095
                     /gene="SEC24C"
                     /coded_by="XM_041474252.1:125..3412"
                     /db_xref="GeneID:121357158"
ORIGIN      
        1 msvnqqahag ppygqpqpgy qgyqqpaygg qslpgapqsq ygayngpmpg yqqpvppqgy
       61 fpslgfpskg spvslnsdts slapnfigsl rapptsgapp pasgashpsg hvaysqfehg
      121 dvqngipasa apmqrppasq pflpgsaptp vsqmstfqqy gppqasvqql rnhmagmtig
      181 staasapppa glgygaprpp ampgpplpgq tvagppssqp nhvsspppps tmaglhpgpp
      241 msglhgpppp thppqpgyqm qqngsfgqmr gpqpnyggay pgapnygspp gpppppkrld
      301 pdsipspqln elppqqkprh ridpdaipsp iqvieddrnn rgsepfvtgv rgqvpplvtt
      361 nfmvkdqgna spryirctsy nipctsdmak qsqvplaavi kplatlppee tlpylvdhge
      421 sgpvrcnrck aymcpfmqfi eggrrfqccf cscvtevpph yfqhldhtgk rvdfydrpel
      481 slgsyeflat vdycknnkfp sppafifmid vsynavksgl vrliceelks lldylpregn
      541 meesairvgf vtynkvlhfy nvksslaqpq mmvvsdvadm fvplldgflv nvnesrtvia
      601 slldqipemf adtretetvf apviqaglea lkaaecagkl fifhtslpia eapgklknrd
      661 drklintdke ktlfqpqtsf ynnlakdcva qgccvdlflf pnqyldvatl gvvpyqtggs
      721 iykyayfqle tdqyrflndl rrdvqkevgf davmrvrtst giratdffga fymsnttdve
      781 magldcdkti tvefkhddkl sedsgallqc allytscagq rrlrihnlsl ncctqladly
      841 rncetdtlin ylakyayrgv lsspvktvrd alinqcaqil acyrkncasp ssagqlilpe
      901 cmkllpvyln cvlksdvlqp gpevttddra yirqlvtsmd vaetnvffyp rllpltkadv
      961 dsdslpaair nseerlskgd iyllenglni fvwvgvnvqq gliqnlfgvs sfsqisnals
     1021 tlpvlenpfs kkvrsivdml qgqrsrymkl iivkqedkle mlfkhflved kslsggasyv
     1081 dflchmhkei rqlls
//
LOCUS       XP_041330194            1121 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec24C isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330194
VERSION     XP_041330194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1121
                     /product="protein transport protein Sec24C isoform X6"
                     /calculated_mol_wt=121730
     Region          <5..>289
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          264..1117
                     /region_name="COG5028"
                     /note="Vesicle coat complex COPII, subunit SEC24/subunit
                     SFB2/subunit SFB3 [Intracellular trafficking and
                     secretion]"
                     /db_xref="CDD:227361"
     CDS             1..1121
                     /gene="SEC24C"
                     /coded_by="XM_041474260.1:125..3490"
                     /db_xref="GeneID:121357158"
ORIGIN      
        1 msvnqqahag ppygqpqpgy qgyqqpaygg qslpgapqsq ygayngpmpg yqqpvppqgs
       61 lrapptsgap ppasgashps ghvaysqfeh gdvqngipas aapmqrppas qpflpgsapt
      121 pvsqmstfqq ygppqasvqq lrnhmagmti gstaasappp aglgyasvpp vsgsfsatgs
      181 glytpssasq gppltsvsqg lplaqppfpg qtiptqrlpt qvpgftpppp stgvgpssyp
      241 pttgaprppa mpgpplpgqt vagppssqpn hvssppppst maglhpgppm sglhgppppt
      301 hppqpgyqmq qngsfgqmrg pqpnyggayp gapnygsppg pppppkrldp dsipspiqvi
      361 eddrnnrgse pfvtgvrgqv pplvttnfmv kdqgnaspry irctsynipc tsdmakqsqv
      421 plaavikpla tlppeetlpy lvdhgesgpv rcnrckaymc pfmqfieggr rfqccfcscv
      481 tevpphyfqh ldhtgkrvdf ydrpelslgs yeflatvdyc knnkfpsppa fifmidvsyn
      541 avksglvrli ceelkslldy lpregnmees airvgfvtyn kvlhfynvks slaqpqmmvv
      601 sdvadmfvpl ldgflvnvne srtviaslld qipemfadtr etetvfapvi qaglealkaa
      661 ecagklfifh tslpiaeapg klknrddrkl intdkektlf qpqtsfynnl akdcvaqgcc
      721 vdlflfpnqy ldvatlgvvp yqtggsiyky ayfqletdqy rflndlrrdv qkevgfdavm
      781 rvrtstgira tdffgafyms nttdvemagl dcdktitvef khddklseds gallqcally
      841 tscagqrrlr ihnlslncct qladlyrnce tdtlinylak yayrgvlssp vktvrdalin
      901 qcaqilacyr kncaspssag qlilpecmkl lpvylncvlk sdvlqpgpev ttddrayirq
      961 lvtsmdvaet nvffyprllp ltkadvdsds lpaairnsee rlskgdiyll englnifvwv
     1021 gvnvqqgliq nlfgvssfsq isnalstlpv lenpfskkvr sivdmlqgqr srymkliivk
     1081 qedklemlfk hflvedksls ggasyvdflc hmhkeirqll s
//
LOCUS       XP_041330206             822 aa            linear   VRT 06-MAY-2021
DEFINITION  neurotrypsin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041330206
VERSION     XP_041330206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474272.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..822
                     /product="neurotrypsin-like"
                     /calculated_mol_wt=89780
     Region          44..>103
                     /region_name="KR"
                     /note="Kringle domain; Kringle domains are believed to
                     play a role in binding mediators, such as peptides, other
                     proteins, membranes, or phospholipids. They are autonomous
                     structural domains, found in a varying number of copies,
                     in blood clotting and...; cl00100"
                     /db_xref="CDD:412161"
     Site            53
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(68,74,99,101)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          224..323
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          331..431
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          446..545
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          577..818
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            577
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(622,672,771)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(765,791,793)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..822
                     /gene="LOC121357190"
                     /coded_by="XM_041474272.1:28..2496"
                     /db_xref="GeneID:121357190"
ORIGIN      
        1 meiskilgll velssllscl rcveaflgsk pnqnhlqsaa psvcavgplg yyngslavte
       61 agaqclnwae fpdyvqqypd rglgdhnfcr npdggttpwc fyrlvsgaig wancdcnqga
      121 vrlaedssve lyfnglwgti cadhwtdwda svvcrqlgls eigtagkksh pgpwpvplhl
      181 qsanchgdee allqcgyqea lsgacnqgsa vvtcvppegv gaplrivggk esfegrvevy
      241 hdgkwgticd dqwddrdaev vcrqlglsgt pkalswahyg qgsgpillde vqcsgnelsl
      301 dqckksdwgq qncdhiedag vscdpftegt vrlaggrsps egrvevyyng dwgtvcddgw
      361 tdlgaqvvcr qlgfsgpaal asegdyaagq gfillddvac vgtelslldc phsnwgqhdc
      421 shaedlgvrc spesntvmdg slgppvrlvd gesttegrve vllngqwgsv cdndwtdrda
      481 avvcrqlgfs gtakaramay fgeghgpihl dniecsgmeh tlgqcatpdt rihscwhsed
      541 agvicdyvee kvqdirrtgp esgvcgmrll hrrkkriigg nkslrgswpw qaslrlkgfr
      601 rdtrllcgat lisscwvvta ahcfkrfgvd vrryllrvgd yhtgvkdefe relpverivl
      661 hrnywagsnd ndialvrmrg reghclsfnh hvlpvclpdr rersdinrqa ciisgwgdtg
      721 ksysrtllqg vvpllpredc earygrkftn rmicagnlse dkrvdscqgd sggplmcqrs
      781 ngrwiilgit swgygcgrkd spgvytkvsk fvpwikkvtk lk
//
LOCUS       XP_041330220             491 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-(1,3)-fucosyltransferase 11 [Pyrgilauda ruficollis].
ACCESSION   XP_041330220
VERSION     XP_041330220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="alpha-(1,3)-fucosyltransferase 11"
                     /calculated_mol_wt=56160
     Region          70..173
                     /region_name="Glyco_tran_10_N"
                     /note="Fucosyltransferase, N-terminal; pfam17039"
                     /db_xref="CDD:465336"
     Region          208..>353
                     /region_name="Glyco_transf_10"
                     /note="Glycosyltransferase family 10 (fucosyltransferase)
                     C-term; pfam00852"
                     /db_xref="CDD:459962"
     CDS             1..491
                     /gene="FUT11"
                     /coded_by="XM_041474286.1:147..1622"
                     /db_xref="GeneID:121357194"
ORIGIN      
        1 mggagpgwgp aglwvtlala wsagvalaae epaepcgadv waqdavppga afvaassyrg
       61 pgnndtrsnk alpillwwsg slfphfpgdt eridcprgsc lvtrsrrvar hrrtkalify
      121 gtdfrayeap lprlphqtwa lfheespmnn yvlshspgir lfnytatfrr esdypltlqw
      181 lpgtaylrap avplaekdaw rrkgygpvly mqshcdvpsd rdryvrelmk yiqvdsygkc
      241 lhnrelpser lrdtstatte dsefmtfiar ykfhlalena icddymtekl wrpmhlgavp
      301 vyrgspavrd wmpnnlsiil iddfdspqel akylnfldkn geeylkyley kntggiknqf
      361 lleslekrew gvndmtlpny lngfecficd kentrvkeeq ehkkshgkip aprphiaqfk
      421 hmgcpmptpg fgsvedlsgg dswkemwlqd ywqsldqgea ltamihrnes hqgrfwdymh
      481 eiflkrttrq h
//
LOCUS       XP_041330235             123 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil-helix-coiled-coil-helix domain-containing protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041330235
VERSION     XP_041330235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..123
                     /product="coiled-coil-helix-coiled-coil-helix
                     domain-containing protein 1"
                     /calculated_mol_wt=14102
     Region          51..85
                     /region_name="CHCH"
                     /note="CHCH domain; pfam06747"
                     /db_xref="CDD:429096"
     CDS             1..123
                     /gene="CHCHD1"
                     /coded_by="XM_041474301.1:56..427"
                     /db_xref="GeneID:121357197"
ORIGIN      
        1 maapaypawv trwvsgqwrs kkrpptlrpp rtlaladkva nrreqsteat citemsvmma
       61 cwkqndfndt pcaeeirmfy dcvakaeker knqnedilsp kgnlpsskvn kllkrfpqit
      121 ryv
//
LOCUS       XP_041330248            1012 aa            linear   VRT 06-MAY-2021
DEFINITION  2-oxoglutarate dehydrogenase-like, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041330248
VERSION     XP_041330248.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474314.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1012
                     /product="2-oxoglutarate dehydrogenase-like, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=115028
     Region          44..1004
                     /region_name="SucA"
                     /note="2-oxoglutarate dehydrogenase complex, dehydrogenase
                     (E1) component, and related enzymes [Energy production and
                     conversion]; COG0567"
                     /db_xref="CDD:440333"
     CDS             1..1012
                     /gene="OGDHL"
                     /coded_by="XM_041474314.1:9..3047"
                     /db_xref="GeneID:121357200"
ORIGIN      
        1 mshlklfaat lkrhgfklle nqdvarrafl hgqryvssgt sepflsgsns nyveemycaw
       61 lenpksvhks wdvffrsata gqaahlparq egkgsflqsh glaptpaaae kvvedhlavq
      121 slirayqirg hhvaqldplg ildadldsfi psdlittidk lgfyglhesd ldkvfqlptt
      181 tfiggnensl slreiikrle htycqhigle fmfindveqc qwirqkfetp gvmkftnedk
      241 rtllarlvrs mrfedflark wssekrfgle gcevmipalk tiidkssemg ieyvimgmph
      301 rgrlnvlanv irkeleqifc qfdpkleaad egsgdvkyhl gmyherinrk tnkkitlslm
      361 anpshleavd pvvqgktkae qfyrgdtagk kvmsillhgd aafagqgvvy etfhlsdlps
      421 yttngtihvv vnnqigfttd prmarsspyp tdvarvvnap ifhvnaddpe avmyvcsvaa
      481 ewrntfnkdv vvdlvcyrrr ghnemdepmf tqplmykqih kqvpvlkkya dkliadgtvt
      541 lqefeeeiak ydriceeayt rskdkkilhi khwldspwpg ffnadgepks mscpptgise
      601 ellthignva ssvpvedfki hsglsrilka rsemtqnrlv dwalaeymaf gsvlkegihv
      661 rlsgqdverg tfshrhhvlh dqevdkricv pmnhlweqqa pytvcnssls eygvlgfelg
      721 famaspnalv cweaqfgdfh ntaqciidqf issgqakwvr hngivlllph gmegmgpehs
      781 sarperflqm snddsdaype ftehfevsql yecnwivvnc stpanyfhvl rrqillpfrk
      841 plivltpksl lrhpeakssf demvsgttfq rvipengpaa qaphevkrvi fctgkvyydl
      901 vkerknqdle kevaitrleq ispfpfdllk eeldkyptad lvwcqeehkn sgyydyvrpr
      961 frtivnrtrp iwyvgrepaa aaatgnknth lvslrrfldt afnleafegk tf
//
LOCUS       XP_041330257             952 aa            linear   VRT 06-MAY-2021
DEFINITION  2-oxoglutarate dehydrogenase-like, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041330257
VERSION     XP_041330257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474323.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..952
                     /product="2-oxoglutarate dehydrogenase-like, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=108376
     Region          44..944
                     /region_name="SucA"
                     /note="2-oxoglutarate dehydrogenase complex, dehydrogenase
                     (E1) component, and related enzymes [Energy production and
                     conversion]; COG0567"
                     /db_xref="CDD:440333"
     CDS             1..952
                     /gene="OGDHL"
                     /coded_by="XM_041474323.1:9..2867"
                     /db_xref="GeneID:121357200"
ORIGIN      
        1 mshlklfaat lkrhgfklle nqdvarrafl hgqryvssgt sepflsgsns nyveemycaw
       61 lenpksvhks wdvffrsata gqaahlparq egkgsflqsh glaptpaaae kvvedhlavq
      121 slirayqirg hhvaqldplg ildadldsfi psdlittidk lgfyglhesd ldkvfqlptt
      181 tfiggnensl slreiikrle htycqhigle fmfindveqc qwirqkfetp gvmkftnedk
      241 rtllarlvrs mrfedflark wssekrfgle gcevmipalk tiidkssemg ieyvimgmph
      301 rgrlnvlanv irkeleqifc qfdpkleaad egsgdvkyhl gmyherinrk tnkkitlslm
      361 anpshleavd pvvqgktkae qfyrgdtagk kvmsillhgd aafagqgvvy etfhlsdlps
      421 yttngtihvv vnnqvcyrrr ghnemdepmf tqplmykqih kqvpvlkkya dkliadgtvt
      481 lqefeeeiak ydriceeayt rskdkkilhi khwldspwpg ffnadgepks mscpptgise
      541 ellthignva ssvpvedfki hsglsrilka rsemtqnrlv dwalaeymaf gsvlkegihv
      601 rlsgqdverg tfshrhhvlh dqevdkricv pmnhlweqqa pytvcnssls eygvlgfelg
      661 famaspnalv cweaqfgdfh ntaqciidqf issgqakwvr hngivlllph gmegmgpehs
      721 sarperflqm snddsdaype ftehfevsql yecnwivvnc stpanyfhvl rrqillpfrk
      781 plivltpksl lrhpeakssf demvsgttfq rvipengpaa qaphevkrvi fctgkvyydl
      841 vkerknqdle kevaitrleq ispfpfdllk eeldkyptad lvwcqeehkn sgyydyvrpr
      901 frtivnrtrp iwyvgrepaa aaatgnknth lvslrrfldt afnleafegk tf
//
LOCUS       XP_041330269             694 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related BTB domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330269
VERSION     XP_041330269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="rho-related BTB domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=79005
     Region          13..207
                     /region_name="RhoBTB"
                     /note="RhoBTB protein is an atypical member of the Rho
                     family of small GTPases; cd01873"
                     /db_xref="CDD:133275"
     Site            order(16,52..53,57..58,60,62,79,83..84,86..88,94,97)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133275"
     Site            order(24..29,84..85,87,141,143,190..191)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133275"
     Site            51..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133275"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133275"
     Site            order(53,86,94,96)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133275"
     Site            order(53..54,88,94)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            order(54..55,94,97)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133275"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133275"
     Site            order(87..88,94..97,100..102)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133275"
     Site            140..143
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133275"
     Site            189..191
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133275"
     Region          248..458
                     /region_name="BTB1_POZ_RHOBTB1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18355"
                     /db_xref="CDD:349664"
     Region          463..588
                     /region_name="BTB2_POZ_RHOBTB1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18358"
                     /db_xref="CDD:349667"
     Region          591..690
                     /region_name="BACK_RHOBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18530"
                     /db_xref="CDD:350605"
     CDS             1..694
                     /gene="RHOBTB1"
                     /coded_by="XM_041474335.1:792..2876"
                     /db_xref="GeneID:121357216"
ORIGIN      
        1 mdidmdyerp nvetikcvvv gdnavgktrl icaracnttl tqyqllathv ptvwaidqyr
       61 vcqevlersr dvvdevsvsl rlwdtfgdhh kdrrfaygrs dvvvlcfsia npnslnhvkt
      121 mwyqeikhfc prtpvilvgc qldlryadle avnrarrpla rpikrgdilp pergrevake
      181 lgipyyetsv fdqfgikdvf dnairaalis rrhlqfwksh lkkvqkpllq apflppkapp
      241 pvikipecpt psmneagyll dsplcadvmf vlqeqdcifa hkiylatsss kfydlflmec
      301 eespyldetq cnkentnkdv lpshletssd sdeaslksld vkipppesse slnmleaesg
      361 etnsaarsls swgkgfvsvh kemqvnpvsk rtcpvtvvkm dssvqaapfk tvlqflytgq
      421 ldenekdltr laqiaeilev fdlrmmveni mnkeafmnqe itkafhvrka nrikeclckg
      481 tfsdvtfkld dgsikahkpl licscewmsa mfggsfiess nsevalpnin ktsmqavldy
      541 lytkqlsssq eldtlelial anrfclphli alaeqhavqe ltkasmsgva idgdvlsyle
      601 laqfhnanql aawclhyict nynsvcskfr keikakssdn qeyferhrwp pvwylkeedh
      661 yqrvkkerek edvalnkhhs krkwcfwnss avva
//
LOCUS       XP_041330279             694 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related BTB domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330279
VERSION     XP_041330279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="rho-related BTB domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=79005
     Region          13..207
                     /region_name="RhoBTB"
                     /note="RhoBTB protein is an atypical member of the Rho
                     family of small GTPases; cd01873"
                     /db_xref="CDD:133275"
     Site            order(16,52..53,57..58,60,62,79,83..84,86..88,94,97)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133275"
     Site            order(24..29,84..85,87,141,143,190..191)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133275"
     Site            51..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133275"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133275"
     Site            order(53,86,94,96)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133275"
     Site            order(53..54,88,94)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            order(54..55,94,97)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133275"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133275"
     Site            order(87..88,94..97,100..102)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133275"
     Site            140..143
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133275"
     Site            189..191
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133275"
     Region          248..458
                     /region_name="BTB1_POZ_RHOBTB1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18355"
                     /db_xref="CDD:349664"
     Region          463..588
                     /region_name="BTB2_POZ_RHOBTB1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18358"
                     /db_xref="CDD:349667"
     Region          591..690
                     /region_name="BACK_RHOBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18530"
                     /db_xref="CDD:350605"
     CDS             1..694
                     /gene="RHOBTB1"
                     /coded_by="XM_041474345.1:348..2432"
                     /db_xref="GeneID:121357216"
ORIGIN      
        1 mdidmdyerp nvetikcvvv gdnavgktrl icaracnttl tqyqllathv ptvwaidqyr
       61 vcqevlersr dvvdevsvsl rlwdtfgdhh kdrrfaygrs dvvvlcfsia npnslnhvkt
      121 mwyqeikhfc prtpvilvgc qldlryadle avnrarrpla rpikrgdilp pergrevake
      181 lgipyyetsv fdqfgikdvf dnairaalis rrhlqfwksh lkkvqkpllq apflppkapp
      241 pvikipecpt psmneagyll dsplcadvmf vlqeqdcifa hkiylatsss kfydlflmec
      301 eespyldetq cnkentnkdv lpshletssd sdeaslksld vkipppesse slnmleaesg
      361 etnsaarsls swgkgfvsvh kemqvnpvsk rtcpvtvvkm dssvqaapfk tvlqflytgq
      421 ldenekdltr laqiaeilev fdlrmmveni mnkeafmnqe itkafhvrka nrikeclckg
      481 tfsdvtfkld dgsikahkpl licscewmsa mfggsfiess nsevalpnin ktsmqavldy
      541 lytkqlsssq eldtlelial anrfclphli alaeqhavqe ltkasmsgva idgdvlsyle
      601 laqfhnanql aawclhyict nynsvcskfr keikakssdn qeyferhrwp pvwylkeedh
      661 yqrvkkerek edvalnkhhs krkwcfwnss avva
//
LOCUS       XP_041330287             694 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related BTB domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330287
VERSION     XP_041330287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474353.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="rho-related BTB domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=79005
     Region          13..207
                     /region_name="RhoBTB"
                     /note="RhoBTB protein is an atypical member of the Rho
                     family of small GTPases; cd01873"
                     /db_xref="CDD:133275"
     Site            order(16,52..53,57..58,60,62,79,83..84,86..88,94,97)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133275"
     Site            order(24..29,84..85,87,141,143,190..191)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133275"
     Site            51..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133275"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133275"
     Site            order(53,86,94,96)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133275"
     Site            order(53..54,88,94)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            order(54..55,94,97)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133275"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133275"
     Site            order(87..88,94..97,100..102)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133275"
     Site            140..143
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133275"
     Site            189..191
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133275"
     Region          248..458
                     /region_name="BTB1_POZ_RHOBTB1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18355"
                     /db_xref="CDD:349664"
     Region          463..588
                     /region_name="BTB2_POZ_RHOBTB1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18358"
                     /db_xref="CDD:349667"
     Region          591..690
                     /region_name="BACK_RHOBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18530"
                     /db_xref="CDD:350605"
     CDS             1..694
                     /gene="RHOBTB1"
                     /coded_by="XM_041474353.1:343..2427"
                     /db_xref="GeneID:121357216"
ORIGIN      
        1 mdidmdyerp nvetikcvvv gdnavgktrl icaracnttl tqyqllathv ptvwaidqyr
       61 vcqevlersr dvvdevsvsl rlwdtfgdhh kdrrfaygrs dvvvlcfsia npnslnhvkt
      121 mwyqeikhfc prtpvilvgc qldlryadle avnrarrpla rpikrgdilp pergrevake
      181 lgipyyetsv fdqfgikdvf dnairaalis rrhlqfwksh lkkvqkpllq apflppkapp
      241 pvikipecpt psmneagyll dsplcadvmf vlqeqdcifa hkiylatsss kfydlflmec
      301 eespyldetq cnkentnkdv lpshletssd sdeaslksld vkipppesse slnmleaesg
      361 etnsaarsls swgkgfvsvh kemqvnpvsk rtcpvtvvkm dssvqaapfk tvlqflytgq
      421 ldenekdltr laqiaeilev fdlrmmveni mnkeafmnqe itkafhvrka nrikeclckg
      481 tfsdvtfkld dgsikahkpl licscewmsa mfggsfiess nsevalpnin ktsmqavldy
      541 lytkqlsssq eldtlelial anrfclphli alaeqhavqe ltkasmsgva idgdvlsyle
      601 laqfhnanql aawclhyict nynsvcskfr keikakssdn qeyferhrwp pvwylkeedh
      661 yqrvkkerek edvalnkhhs krkwcfwnss avva
//
LOCUS       XP_041330296             694 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related BTB domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330296
VERSION     XP_041330296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="rho-related BTB domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=79005
     Region          13..207
                     /region_name="RhoBTB"
                     /note="RhoBTB protein is an atypical member of the Rho
                     family of small GTPases; cd01873"
                     /db_xref="CDD:133275"
     Site            order(16,52..53,57..58,60,62,79,83..84,86..88,94,97)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133275"
     Site            order(24..29,84..85,87,141,143,190..191)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133275"
     Site            51..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133275"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133275"
     Site            order(53,86,94,96)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133275"
     Site            order(53..54,88,94)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            order(54..55,94,97)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133275"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133275"
     Site            order(87..88,94..97,100..102)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133275"
     Site            140..143
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133275"
     Site            189..191
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133275"
     Region          248..458
                     /region_name="BTB1_POZ_RHOBTB1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18355"
                     /db_xref="CDD:349664"
     Region          463..588
                     /region_name="BTB2_POZ_RHOBTB1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18358"
                     /db_xref="CDD:349667"
     Region          591..690
                     /region_name="BACK_RHOBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18530"
                     /db_xref="CDD:350605"
     CDS             1..694
                     /gene="RHOBTB1"
                     /coded_by="XM_041474362.1:332..2416"
                     /db_xref="GeneID:121357216"
ORIGIN      
        1 mdidmdyerp nvetikcvvv gdnavgktrl icaracnttl tqyqllathv ptvwaidqyr
       61 vcqevlersr dvvdevsvsl rlwdtfgdhh kdrrfaygrs dvvvlcfsia npnslnhvkt
      121 mwyqeikhfc prtpvilvgc qldlryadle avnrarrpla rpikrgdilp pergrevake
      181 lgipyyetsv fdqfgikdvf dnairaalis rrhlqfwksh lkkvqkpllq apflppkapp
      241 pvikipecpt psmneagyll dsplcadvmf vlqeqdcifa hkiylatsss kfydlflmec
      301 eespyldetq cnkentnkdv lpshletssd sdeaslksld vkipppesse slnmleaesg
      361 etnsaarsls swgkgfvsvh kemqvnpvsk rtcpvtvvkm dssvqaapfk tvlqflytgq
      421 ldenekdltr laqiaeilev fdlrmmveni mnkeafmnqe itkafhvrka nrikeclckg
      481 tfsdvtfkld dgsikahkpl licscewmsa mfggsfiess nsevalpnin ktsmqavldy
      541 lytkqlsssq eldtlelial anrfclphli alaeqhavqe ltkasmsgva idgdvlsyle
      601 laqfhnanql aawclhyict nynsvcskfr keikakssdn qeyferhrwp pvwylkeedh
      661 yqrvkkerek edvalnkhhs krkwcfwnss avva
//
LOCUS       XP_041330304             694 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related BTB domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330304
VERSION     XP_041330304.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474370.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="rho-related BTB domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=79005
     Region          13..207
                     /region_name="RhoBTB"
                     /note="RhoBTB protein is an atypical member of the Rho
                     family of small GTPases; cd01873"
                     /db_xref="CDD:133275"
     Site            order(16,52..53,57..58,60,62,79,83..84,86..88,94,97)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133275"
     Site            order(24..29,84..85,87,141,143,190..191)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133275"
     Site            51..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133275"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133275"
     Site            order(53,86,94,96)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133275"
     Site            order(53..54,88,94)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            order(54..55,94,97)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133275"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133275"
     Site            order(87..88,94..97,100..102)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133275"
     Site            140..143
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133275"
     Site            189..191
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133275"
     Region          248..458
                     /region_name="BTB1_POZ_RHOBTB1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18355"
                     /db_xref="CDD:349664"
     Region          463..588
                     /region_name="BTB2_POZ_RHOBTB1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18358"
                     /db_xref="CDD:349667"
     Region          591..690
                     /region_name="BACK_RHOBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18530"
                     /db_xref="CDD:350605"
     CDS             1..694
                     /gene="RHOBTB1"
                     /coded_by="XM_041474370.1:239..2323"
                     /db_xref="GeneID:121357216"
ORIGIN      
        1 mdidmdyerp nvetikcvvv gdnavgktrl icaracnttl tqyqllathv ptvwaidqyr
       61 vcqevlersr dvvdevsvsl rlwdtfgdhh kdrrfaygrs dvvvlcfsia npnslnhvkt
      121 mwyqeikhfc prtpvilvgc qldlryadle avnrarrpla rpikrgdilp pergrevake
      181 lgipyyetsv fdqfgikdvf dnairaalis rrhlqfwksh lkkvqkpllq apflppkapp
      241 pvikipecpt psmneagyll dsplcadvmf vlqeqdcifa hkiylatsss kfydlflmec
      301 eespyldetq cnkentnkdv lpshletssd sdeaslksld vkipppesse slnmleaesg
      361 etnsaarsls swgkgfvsvh kemqvnpvsk rtcpvtvvkm dssvqaapfk tvlqflytgq
      421 ldenekdltr laqiaeilev fdlrmmveni mnkeafmnqe itkafhvrka nrikeclckg
      481 tfsdvtfkld dgsikahkpl licscewmsa mfggsfiess nsevalpnin ktsmqavldy
      541 lytkqlsssq eldtlelial anrfclphli alaeqhavqe ltkasmsgva idgdvlsyle
      601 laqfhnanql aawclhyict nynsvcskfr keikakssdn qeyferhrwp pvwylkeedh
      661 yqrvkkerek edvalnkhhs krkwcfwnss avva
//
LOCUS       XP_041330313             618 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related BTB domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330313
VERSION     XP_041330313.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474379.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..618
                     /product="rho-related BTB domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=69680
     Region          13..207
                     /region_name="RhoBTB"
                     /note="RhoBTB protein is an atypical member of the Rho
                     family of small GTPases; cd01873"
                     /db_xref="CDD:133275"
     Site            order(16,52..53,57..58,60,62,79,83..84,86..88,94,97)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133275"
     Site            order(24..29,84..85,87,141,143,190..191)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133275"
     Site            51..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133275"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133275"
     Site            order(53,86,94,96)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:133275"
     Site            order(53..54,88,94)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:133275"
     Site            order(54..55,94,97)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133275"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133275"
     Site            order(87..88,94..97,100..102)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133275"
     Site            140..143
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133275"
     Site            189..191
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133275"
     Region          248..458
                     /region_name="BTB1_POZ_RHOBTB1"
                     /note="first BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18355"
                     /db_xref="CDD:349664"
     Region          463..588
                     /region_name="BTB2_POZ_RHOBTB1"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 1 (RhoBTB1);
                     cd18358"
                     /db_xref="CDD:349667"
     CDS             1..618
                     /gene="RHOBTB1"
                     /coded_by="XM_041474379.1:806..2662"
                     /db_xref="GeneID:121357216"
ORIGIN      
        1 mdidmdyerp nvetikcvvv gdnavgktrl icaracnttl tqyqllathv ptvwaidqyr
       61 vcqevlersr dvvdevsvsl rlwdtfgdhh kdrrfaygrs dvvvlcfsia npnslnhvkt
      121 mwyqeikhfc prtpvilvgc qldlryadle avnrarrpla rpikrgdilp pergrevake
      181 lgipyyetsv fdqfgikdvf dnairaalis rrhlqfwksh lkkvqkpllq apflppkapp
      241 pvikipecpt psmneagyll dsplcadvmf vlqeqdcifa hkiylatsss kfydlflmec
      301 eespyldetq cnkentnkdv lpshletssd sdeaslksld vkipppesse slnmleaesg
      361 etnsaarsls swgkgfvsvh kemqvnpvsk rtcpvtvvkm dssvqaapfk tvlqflytgq
      421 ldenekdltr laqiaeilev fdlrmmveni mnkeafmnqe itkafhvrka nrikeclckg
      481 tfsdvtfkld dgsikahkpl licscewmsa mfggsfiess nsevalpnin ktsmqavldy
      541 lytkqlsssq eldtlelial anrfclphli alaeqhavqe ltkasmsgva idgdvlsyle
      601 laqfleiyld lyckdnis
//
LOCUS       XP_041330326             555 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamate dehydrogenase 1, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041330326
VERSION     XP_041330326.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474392.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..555
                     /product="glutamate dehydrogenase 1, mitochondrial"
                     /calculated_mol_wt=60756
     Region          60..552
                     /region_name="GdhA"
                     /note="Glutamate dehydrogenase/leucine dehydrogenase
                     [Amino acid transport and metabolism]; COG0334"
                     /db_xref="CDD:440103"
     CDS             1..555
                     /gene="GLUD1"
                     /coded_by="XM_041474392.1:101..1768"
                     /db_xref="GeneID:121357243"
ORIGIN      
        1 myrylgella srlaagsvla gsepggpaaa aaggavvaaa wgggrcprrh yceaakkedd
       61 pnffkmvegf fdrgasived klveglrtre gmeerrhrvr gilriikpcn hvlsvsfpik
      121 rdngewevie gyraqhsqhr tpckggirys mdvsvdevka laslmtykca vvdvpfggak
      181 agvkinpkny tdnelekitr rftmelakkg figpgvdvpa pdmstgerem swiadtyast
      241 ighydinaha cvtgkpisqg gihgrisatg rgvfhgienf ineasymsll gmtpgfgdkt
      301 favqgfgnvg lhsmrylhrf gakcvavgef ngsiwnpdgi dpkeledfkl qhgtimgfpk
      361 akplegsile tdcdilipaa sekqltkana hkvkakiiae gangpttpea dkiflernim
      421 vipdlylnag gvtvsyfewl knlnhvsygr ltfkyerdsn yhllmsvqes lerkfgkhgg
      481 tipvvptaef qdrisgasek divhsglayt mersarqimr tamtynlgld lrtaayvnai
      541 ekvfkvynea gltft
//
LOCUS       XP_041330339             396 aa            linear   VRT 06-MAY-2021
DEFINITION  S-adenosylmethionine synthase [Pyrgilauda ruficollis].
ACCESSION   XP_041330339
VERSION     XP_041330339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474405.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..396
                     /product="S-adenosylmethionine synthase"
                     /calculated_mol_wt=43701
     Region          17..394
                     /region_name="PTZ00104"
                     /note="S-adenosylmethionine synthase; Provisional"
                     /db_xref="CDD:240268"
     Site            order(20..22,24,58,60,62,67,69..71,135..138,140,182,184,
                     186,203,205,244,247,258..260,262..265,268,273..280,282,
                     286,318,320..324,329..330,332)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:350837"
     Site            order(24,30..32,56,71,114,117..118,134..135,180,182,207,
                     248,250..251,253,259,265..266,280..282,286,290,292,323)
                     /site_type="active"
                     /db_xref="CDD:350837"
     Site            order(24,30..31,180,182,266)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350837"
     CDS             1..396
                     /gene="MAT1A"
                     /coded_by="XM_041474405.1:219..1409"
                     /db_xref="GeneID:121357250"
ORIGIN      
        1 mngpvdglcd ytlddegafm ftsesvgegh pdkicdqisd avldahlkqd pnakvacetv
       61 cktgmvllcg eitsraivdy qrvvrdairh igyddsakgf dyktcnvlva leqqspdiaq
      121 gvhlhrneed vgagdqglmf gyatdeteec mpltiilahk lnarlaelrr ngelpwlrpd
      181 sktqvtvqyi qkngavipvr vhtivisvqh detislenmr rtlkerviqv vvpakylddk
      241 tvyhlqpsgr fviggpqgda gvtgrkiivd tyggwgahgg gafsgkdytk vdrsaayaar
      301 wvakslvkag lcrrvlvqvs yaigvahpls islftygtsq ktekelldiv hknfdlrpgv
      361 ivrdldlkkp iyqktacygh fgrqefswev pkklvf
//
LOCUS       XP_041330350             383 aa            linear   VRT 06-MAY-2021
DEFINITION  PDZ and LIM domain protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330350
VERSION     XP_041330350.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474416.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..383
                     /product="PDZ and LIM domain protein 1 isoform X1"
                     /calculated_mol_wt=41961
     Region          5..83
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(13..19,31,34,63,67,70..71)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          196..285
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          314..365
                     /region_name="LIM_CLP36"
                     /note="This family represents the LIM domain of CLP36;
                     cd09448"
                     /db_xref="CDD:188832"
     Site            order(314,317,334,337,340,343,361,364)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188832"
     CDS             1..383
                     /gene="PDLIM1"
                     /coded_by="XM_041474416.1:60..1211"
                     /db_xref="GeneID:121357258"
ORIGIN      
        1 mgthrivlsg pgpwgfrlvg grdfeqplai srvtpgskaa ianlcigdqi iaidgvntdn
       61 mthleaqnki kgctdeltlt vsrteakvws plvseegkth pykmnlasep qqrptqfpra
      121 fsmtyqpagl nsrpspvgam qapmasvydp lqsselrrrh sassspsqvr vgpeqlkhaa
      181 qvcpnspvev evpglkvlhv qfnsplqlys qsnimdtlqg qissvspdfp sleqhnqtpg
      241 niaidkqsev ykmlqenqes nepprqsasf lvlqeilese ekgdptkpsg frsvkapttk
      301 vassignaqk lpmcdkcgsg ivgmfvkird kqrhpecyvc sdcgtnlkqk ghffvedqiy
      361 cekharervv ppegyevvtv fpk
//
LOCUS       XP_041330360             327 aa            linear   VRT 06-MAY-2021
DEFINITION  PDZ and LIM domain protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330360
VERSION     XP_041330360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="PDZ and LIM domain protein 1 isoform X2"
                     /calculated_mol_wt=35613
     Region          5..83
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(13..19,31,34,63,67,70..71)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          136..229
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          258..309
                     /region_name="LIM_CLP36"
                     /note="This family represents the LIM domain of CLP36;
                     cd09448"
                     /db_xref="CDD:188832"
     Site            order(258,261,278,281,284,287,305,308)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188832"
     CDS             1..327
                     /gene="PDLIM1"
                     /coded_by="XM_041474426.1:60..1043"
                     /db_xref="GeneID:121357258"
ORIGIN      
        1 mgthrivlsg pgpwgfrlvg grdfeqplai srvtpgskaa ianlcigdqi iaidgvntdn
       61 mthleaqnki kgctdeltlt vsrteakvws plvseegkth pykmnlasep qeirhigsah
      121 nrsavpftaa tasaprvita qynspaglys seniqtfnna vetktspgal epskpleqhn
      181 qtpgniaidk qsevykmlqe nqesnepprq sasflvlqei leseekgdpt kpsgfrsvka
      241 pttkvassig naqklpmcdk cgsgivgmfv kirdkqrhpe cyvcsdcgtn lkqkghffve
      301 dqiycekhar ervvppegye vvtvfpk
//
LOCUS       XP_041330369             331 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 3 subunit F [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330369
VERSION     XP_041330369.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474435.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="eukaryotic translation initiation factor 3
                     subunit F"
                     /calculated_mol_wt=35198
     Region          66..328
                     /region_name="MPN_eIF3f"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains without
                     catalytic isopeptidase activity, found in eIF3f; cd08064"
                     /db_xref="CDD:163695"
     CDS             1..331
                     /gene="EIF3F"
                     /coded_by="XM_041474435.1:1..996"
                     /db_xref="GeneID:121357271"
ORIGIN      
        1 maatapgaap pppappppqs ptaaptapag sappaaaptp paapapppaa plsaalsgpf
       61 pggrvvrlhp vvlasivdsf errnegaarv igtllgtvdk hsvevtncfs vphnesedev
      121 avdmefaknm yelhkkvsps eiilgwyatg hditehsvli heyysreahn pihltvdtsl
      181 qnsrmsikay vsapmgvpgk tmgvmftplt vkyvyydter igvdlimktc fspnrvigls
      241 sdlqqvgsas ariqdtltmv lqyaedvlsg kvaadntvgr flmdlinqvp kispedfetm
      301 lnsnindllm vtylanltqs qialneklls l
//
LOCUS       XP_041330383             557 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase EGR2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330383
VERSION     XP_041330383.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474449.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..557
                     /product="E3 SUMO-protein ligase EGR2"
                     /calculated_mol_wt=57494
     Region          193..306
                     /region_name="DUF3446"
                     /note="Early growth response N-terminal domain; pfam11928"
                     /db_xref="CDD:463400"
     Region          439..463
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          441..463
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(448,450,452,454..455,458..459,462,476,478,482..483,
                     486..487,490,504,506,508,510..511,514..515,518)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          467..>523
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          471..491
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          499..519
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..557
                     /gene="EGR2"
                     /coded_by="XM_041474449.1:99..1772"
                     /db_xref="GeneID:121357288"
ORIGIN      
        1 mgsdvpgiqg apinsyrqtc pparaaagar rsrgtagtap prrggrppah aapaprgppa
       61 lvvggrgkrp llslpspprv ptagrerrsp grpaapmmta kavdkipvtl ggfvhqlpea
      121 iypaddisaa lptsvaifpn adlagpfdqm sgvagdgmin vdmgdkrald lpygggfapn
      181 apasrnqtft ymgkfsidpq ypgagcypeg iinivsagil qgvstpssaa ssaassassa
      241 assvtaasat spnplagalg ctmaqgqpad lehlyspppp pysgcgdlyp qdpssaflpa
      301 agggalpfpp ppsypspkaa aadgglftmi peyggffppp qcqrelhagp drkpfpcpld
      361 slrvpppltp lstirnftmg appagaapgs apgsgggega garlpagays phhlplrpil
      421 rprkypnrps ktpvherpyp cpaegcdrrf srsdeltrhi rihtghkpfq cricmrnfsr
      481 sdhltthirt htgekpfacd fcgrkfarsd erkrhtkihl rqkerkgaaa aaggcpqpgg
      541 gsgtaalapc aartrtp
//
LOCUS       XP_041330392             398 aa            linear   VRT 06-MAY-2021
DEFINITION  lipase member M-like [Pyrgilauda ruficollis].
ACCESSION   XP_041330392
VERSION     XP_041330392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="lipase member M-like"
                     /calculated_mol_wt=45579
     Region          1..392
                     /region_name="PLN02872"
                     /note="triacylglycerol lipase"
                     /db_xref="CDD:215470"
     CDS             1..398
                     /gene="LOC121357299"
                     /coded_by="XM_041474458.1:1..1197"
                     /db_xref="GeneID:121357299"
ORIGIN      
        1 mwlliailll vqaptssega trqkkalnpe almnvsqiic hrgypseeye vltrdgyyih
       61 lnriphgrek pknrgakpvv flqhgifgeg shwvenlann slgfiladsg ydvwlansrg
      121 tswsrrhqhl sadqlefwdf sfhemamfdl paaidfvlqk tgqkqlhyvg ysqgcslafi
      181 afssmpelaq kvkmffalap vvslkhtksp fmkmqllvdn klkmipvllg rtdaslrirk
      241 lwrflpelcr htllhrpcan lffllggyne knlnmtrldv ytshypdgts vkniihwaqv
      301 iksgefkafd ygsenpakyh qdtpplyrve empvptavws ggqdwaadwr dvlqllpris
      361 hlvtythipd wnhwdfvwgl dapgrlyssi lrlmegsr
//
LOCUS       XP_041330404             901 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM13C [Pyrgilauda ruficollis].
ACCESSION   XP_041330404
VERSION     XP_041330404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..901
                     /product="protein FAM13C"
                     /calculated_mol_wt=101889
     Region          47..196
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cd00159"
                     /db_xref="CDD:238090"
     Site            order(69,106,110,181,184..185)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            69
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     Region          843..882
                     /region_name="RecQL4_SLD2_NTD"
                     /note="N-terminal homeodomain-like domain of metazoan RecQ
                     protein-like 4 (RecQL4), fungal DNA replication regulator
                     SLD2 and similar proteins; cd22289"
                     /db_xref="CDD:412085"
     CDS             1..901
                     /gene="FAM13C"
                     /coded_by="XM_041474470.1:2335..5040"
                     /db_xref="GeneID:121357306"
ORIGIN      
        1 mkqsfssiqv rhttnkvspe lqfsregstf gvpletlved aeecgvpslv tqmveylevf
       61 glervgifrv ggsankikel rqkynqgekv dlindgdvds vasllklflk elpvavfpdn
      121 icsgllktfq ehkintteci enlrqllscl pkahqnllqf lsafllkvat ysavnfmtle
      181 nlaivfgpal fkipvsplac eeqrlyngll lyllqhqeml fvgldpcfsh rqadglqasn
      241 tedveedrft llsiqdksfn ttalaecdgy sdsvhedqag sssprdddnk enypdnsavl
      301 eerqlplqdt qqhkqqvlnd calkpemgnl klrkpkpiak lengkshees qelecalpsl
      361 sewqgkagss annyaqnval kcqeavvriq pridqstsis pkeatdqfns lnensllklq
      421 aletdlcsaf lpaqeetpql papkdtapsp aqssvqadga scgeqyhfis piidfnlmhq
      481 qrdseepvpa hrdwqndmes spqehhslat srllyhitdg dnpllsprcs ifsqsqrfnl
      541 dtesapspps aqpfmmprss srcscedcke pqtvtqltkh lqslkrkirk yeekfeqekk
      601 ylpshgdkts npevlkwmna lakgrkqlke lklrmseeqn ctstgpqrne hcegsgtske
      661 agtqeatsme papsveetmd svlrrlkekr qhfnlpetik dmtkkqmale kinlqkclly
      721 fesihgqpvt kqekslmkpl ydryriikkl laapslitti qeeedsdedr sqsshelssg
      781 pmscfpveeh lcysqeesep ahispldekk vyrqtalsms nlheatmpvl lehlretrad
      841 kkrlrkalre feeqfykqtg rspqkedrvp maeeyseykh tkakirllev liskhdiskt
      901 i
//
LOCUS       XP_041330414             901 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM13C [Pyrgilauda ruficollis].
ACCESSION   XP_041330414
VERSION     XP_041330414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474480.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..901
                     /product="protein FAM13C"
                     /calculated_mol_wt=101889
     Region          47..196
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cd00159"
                     /db_xref="CDD:238090"
     Site            order(69,106,110,181,184..185)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            69
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     Region          843..882
                     /region_name="RecQL4_SLD2_NTD"
                     /note="N-terminal homeodomain-like domain of metazoan RecQ
                     protein-like 4 (RecQL4), fungal DNA replication regulator
                     SLD2 and similar proteins; cd22289"
                     /db_xref="CDD:412085"
     CDS             1..901
                     /gene="FAM13C"
                     /coded_by="XM_041474480.1:2280..4985"
                     /db_xref="GeneID:121357306"
ORIGIN      
        1 mkqsfssiqv rhttnkvspe lqfsregstf gvpletlved aeecgvpslv tqmveylevf
       61 glervgifrv ggsankikel rqkynqgekv dlindgdvds vasllklflk elpvavfpdn
      121 icsgllktfq ehkintteci enlrqllscl pkahqnllqf lsafllkvat ysavnfmtle
      181 nlaivfgpal fkipvsplac eeqrlyngll lyllqhqeml fvgldpcfsh rqadglqasn
      241 tedveedrft llsiqdksfn ttalaecdgy sdsvhedqag sssprdddnk enypdnsavl
      301 eerqlplqdt qqhkqqvlnd calkpemgnl klrkpkpiak lengkshees qelecalpsl
      361 sewqgkagss annyaqnval kcqeavvriq pridqstsis pkeatdqfns lnensllklq
      421 aletdlcsaf lpaqeetpql papkdtapsp aqssvqadga scgeqyhfis piidfnlmhq
      481 qrdseepvpa hrdwqndmes spqehhslat srllyhitdg dnpllsprcs ifsqsqrfnl
      541 dtesapspps aqpfmmprss srcscedcke pqtvtqltkh lqslkrkirk yeekfeqekk
      601 ylpshgdkts npevlkwmna lakgrkqlke lklrmseeqn ctstgpqrne hcegsgtske
      661 agtqeatsme papsveetmd svlrrlkekr qhfnlpetik dmtkkqmale kinlqkclly
      721 fesihgqpvt kqekslmkpl ydryriikkl laapslitti qeeedsdedr sqsshelssg
      781 pmscfpveeh lcysqeesep ahispldekk vyrqtalsms nlheatmpvl lehlretrad
      841 kkrlrkalre feeqfykqtg rspqkedrvp maeeyseykh tkakirllev liskhdiskt
      901 i
//
LOCUS       XP_041330425             507 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330425
VERSION     XP_041330425.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474491.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="monocarboxylate transporter 9 isoform X1"
                     /calculated_mol_wt=55667
     Region          12..469
                     /region_name="MFS_MCT9"
                     /note="Monocarboxylate transporter 9 of the Major
                     Facilitator Superfamily of transporters; cd17428"
                     /db_xref="CDD:340986"
     Site            order(23..24,27..28,31,66,117..118,120..122,125,144,
                     147..148,151,311,314..315,318..320,323,351,355,406..407,
                     411,415,430,433..434,437..438,441)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340986"
     CDS             1..507
                     /gene="SLC16A9"
                     /coded_by="XM_041474491.1:226..1749"
                     /db_xref="GeneID:121357316"
ORIGIN      
        1 mvfrkppdgg wgwvivvvsf ftqflcygsp lavgvlylew ldafgegkgk tawvgslang
       61 igllaspvcs icvssfgarp vaifsgfmva gglmmssfap niyflyvsyg ivvglgcgll
      121 ytatvtitcq yfdkrrglal glistgssvg lfiyaalqre lielygldgc llivgalsln
      181 ilacgslmrp lesssspppe kmfvdkvpdq yfvyhekekt veenisilek gyideksvnn
      241 vpdckqdsil nknalssinv nekdtykkkv veqtnfckql akrkwqlylt ywketmvlfk
      301 nkvfsalfva illfdiggfp psllmedvar saniseddyy mplisiigim ttvgklilgi
      361 ladfkwvntl ylyvttllmt gvalfaipfa ksyltlamls gilgfltgnw sifpyvttkt
      421 vgieklthay gilmffaglg nslgppivgw fydwtqeynt afyfsgfcvl lggfllllaa
      481 lpcwnactnq ssklppntys ykvasna
//
LOCUS       XP_041330434             507 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330434
VERSION     XP_041330434.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474500.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="monocarboxylate transporter 9 isoform X1"
                     /calculated_mol_wt=55667
     Region          12..469
                     /region_name="MFS_MCT9"
                     /note="Monocarboxylate transporter 9 of the Major
                     Facilitator Superfamily of transporters; cd17428"
                     /db_xref="CDD:340986"
     Site            order(23..24,27..28,31,66,117..118,120..122,125,144,
                     147..148,151,311,314..315,318..320,323,351,355,406..407,
                     411,415,430,433..434,437..438,441)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340986"
     CDS             1..507
                     /gene="SLC16A9"
                     /coded_by="XM_041474500.1:155..1678"
                     /db_xref="GeneID:121357316"
ORIGIN      
        1 mvfrkppdgg wgwvivvvsf ftqflcygsp lavgvlylew ldafgegkgk tawvgslang
       61 igllaspvcs icvssfgarp vaifsgfmva gglmmssfap niyflyvsyg ivvglgcgll
      121 ytatvtitcq yfdkrrglal glistgssvg lfiyaalqre lielygldgc llivgalsln
      181 ilacgslmrp lesssspppe kmfvdkvpdq yfvyhekekt veenisilek gyideksvnn
      241 vpdckqdsil nknalssinv nekdtykkkv veqtnfckql akrkwqlylt ywketmvlfk
      301 nkvfsalfva illfdiggfp psllmedvar saniseddyy mplisiigim ttvgklilgi
      361 ladfkwvntl ylyvttllmt gvalfaipfa ksyltlamls gilgfltgnw sifpyvttkt
      421 vgieklthay gilmffaglg nslgppivgw fydwtqeynt afyfsgfcvl lggfllllaa
      481 lpcwnactnq ssklppntys ykvasna
//
LOCUS       XP_041330442             507 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330442
VERSION     XP_041330442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="monocarboxylate transporter 9 isoform X1"
                     /calculated_mol_wt=55667
     Region          12..469
                     /region_name="MFS_MCT9"
                     /note="Monocarboxylate transporter 9 of the Major
                     Facilitator Superfamily of transporters; cd17428"
                     /db_xref="CDD:340986"
     Site            order(23..24,27..28,31,66,117..118,120..122,125,144,
                     147..148,151,311,314..315,318..320,323,351,355,406..407,
                     411,415,430,433..434,437..438,441)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340986"
     CDS             1..507
                     /gene="SLC16A9"
                     /coded_by="XM_041474508.1:198..1721"
                     /db_xref="GeneID:121357316"
ORIGIN      
        1 mvfrkppdgg wgwvivvvsf ftqflcygsp lavgvlylew ldafgegkgk tawvgslang
       61 igllaspvcs icvssfgarp vaifsgfmva gglmmssfap niyflyvsyg ivvglgcgll
      121 ytatvtitcq yfdkrrglal glistgssvg lfiyaalqre lielygldgc llivgalsln
      181 ilacgslmrp lesssspppe kmfvdkvpdq yfvyhekekt veenisilek gyideksvnn
      241 vpdckqdsil nknalssinv nekdtykkkv veqtnfckql akrkwqlylt ywketmvlfk
      301 nkvfsalfva illfdiggfp psllmedvar saniseddyy mplisiigim ttvgklilgi
      361 ladfkwvntl ylyvttllmt gvalfaipfa ksyltlamls gilgfltgnw sifpyvttkt
      421 vgieklthay gilmffaglg nslgppivgw fydwtqeynt afyfsgfcvl lggfllllaa
      481 lpcwnactnq ssklppntys ykvasna
//
LOCUS       XP_041330450             507 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330450
VERSION     XP_041330450.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474516.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="monocarboxylate transporter 9 isoform X1"
                     /calculated_mol_wt=55667
     Region          12..469
                     /region_name="MFS_MCT9"
                     /note="Monocarboxylate transporter 9 of the Major
                     Facilitator Superfamily of transporters; cd17428"
                     /db_xref="CDD:340986"
     Site            order(23..24,27..28,31,66,117..118,120..122,125,144,
                     147..148,151,311,314..315,318..320,323,351,355,406..407,
                     411,415,430,433..434,437..438,441)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340986"
     CDS             1..507
                     /gene="SLC16A9"
                     /coded_by="XM_041474516.1:111..1634"
                     /db_xref="GeneID:121357316"
ORIGIN      
        1 mvfrkppdgg wgwvivvvsf ftqflcygsp lavgvlylew ldafgegkgk tawvgslang
       61 igllaspvcs icvssfgarp vaifsgfmva gglmmssfap niyflyvsyg ivvglgcgll
      121 ytatvtitcq yfdkrrglal glistgssvg lfiyaalqre lielygldgc llivgalsln
      181 ilacgslmrp lesssspppe kmfvdkvpdq yfvyhekekt veenisilek gyideksvnn
      241 vpdckqdsil nknalssinv nekdtykkkv veqtnfckql akrkwqlylt ywketmvlfk
      301 nkvfsalfva illfdiggfp psllmedvar saniseddyy mplisiigim ttvgklilgi
      361 ladfkwvntl ylyvttllmt gvalfaipfa ksyltlamls gilgfltgnw sifpyvttkt
      421 vgieklthay gilmffaglg nslgppivgw fydwtqeynt afyfsgfcvl lggfllllaa
      481 lpcwnactnq ssklppntys ykvasna
//
LOCUS       XP_041330455             420 aa            linear   VRT 06-MAY-2021
DEFINITION  monocarboxylate transporter 9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330455
VERSION     XP_041330455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="monocarboxylate transporter 9 isoform X2"
                     /calculated_mol_wt=46478
     Region          <1..382
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(30..31,33..35,38,57,60..61,64,224,227..228,231..233,
                     236,264,268,319..320,324,328,343,346..347,350..351,354)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..420
                     /gene="SLC16A9"
                     /coded_by="XM_041474521.1:85..1347"
                     /db_xref="GeneID:121357316"
ORIGIN      
        1 mvagglmmss fapniyflyv sygivvglgc gllytatvti tcqyfdkrrg lalglistgs
       61 svglfiyaal qrelielygl dgcllivgal slnilacgsl mrplessssp ppekmfvdkv
      121 pdqyfvyhek ektveenisi lekgyideks vnnvpdckqd silnknalss invnekdtyk
      181 kkvveqtnfc kqlakrkwql yltywketmv lfknkvfsal fvaillfdig gfppsllmed
      241 varsanised dyymplisii gimttvgkli lgiladfkwv ntlylyvttl lmtgvalfai
      301 pfaksyltla mlsgilgflt gnwsifpyvt tktvgieklt haygilmffa glgnslgppi
      361 vgwfydwtqe yntafyfsgf cvllggflll laalpcwnac tnqssklppn tysykvasna
//
LOCUS       XP_041330468             376 aa            linear   VRT 06-MAY-2021
DEFINITION  phytanoyl-CoA hydroxylase-interacting protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330468
VERSION     XP_041330468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474534.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..376
                     /product="phytanoyl-CoA hydroxylase-interacting
                     protein-like"
                     /calculated_mol_wt=42385
     Region          53..158
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(147..148,150..151)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          157..376
                     /region_name="PHYHIP_C"
                     /note="Phytanoyl-CoA hydroxylase-interacting protein
                     C-terminus; pfam19281"
                     /db_xref="CDD:437113"
     CDS             1..376
                     /gene="PHYHIPL"
                     /coded_by="XM_041474534.1:165..1295"
                     /db_xref="GeneID:121357345"
ORIGIN      
        1 meaprlahtm ssptspceev iknlsleaiq lcdrdgnksq dsgiaemeel pvphnikisn
       61 itcdsfkisw dmdskskdri thyfidlnkk enknsnkfkh kdvptklvak avplpmtvrg
      121 hwflsprtey tvavqtaskq vdgdyvvsew seiiefctad yskvhltqll ekaeviagrm
      181 lklsvfyrnq hkeyfdyire hhgnamqpsv kdnsgshgsp isgklegiff scntefntgk
      241 ppqdspygry ryeiaaeklf npntnlyfgd fycmytayhy vilviapvgs pgdefckqrl
      301 pqlnikdnkf ltcdeedgvm vyhhaqdvil eviytdpvdl slgtvaeitg hqlmslstan
      361 akkdpscktc nisvgr
//
LOCUS       XP_041330481             686 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-dependent protein kinase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330481
VERSION     XP_041330481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..686
                     /product="cGMP-dependent protein kinase 1 isoform X1"
                     /calculated_mol_wt=77675
     Region          4..55
                     /region_name="DD_cGKI-beta"
                     /note="Dimerization/Docking domain of Cyclic GMP-dependent
                     Protein Kinase I beta; cd12086"
                     /db_xref="CDD:213375"
     Site            order(4,7..8,10..11,14,17..18,21..22,25,28..29,31..32,
                     35..36,38..39,42..43,45..46,49..50)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:213375"
     Site            order(26..27,29,31)
                     /site_type="other"
                     /note="putative GKAP docking site [polypeptide binding]"
                     /db_xref="CDD:213375"
     Region          118..227
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(182..183,192..194)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(214..216,220..222)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          237..341
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(306..307,316..318)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Region          381..641
                     /region_name="STKc_cGK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     cGMP-dependent protein kinase (cGK or PKG); cd05572"
                     /db_xref="CDD:270724"
     Site            order(381..385,389,403,405,437,453..454,456,460,462,499,
                     501,503..504,506,516..517,520,533..538,565,571,574)
                     /site_type="active"
                     /db_xref="CDD:270724"
     Site            order(381..385,389,403,405,437,454..456,460,499,501,
                     503..504,506,516..517)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270724"
     Site            order(385,460,462,499,501,503,520,533..538,565,571,574)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270724"
     Site            order(516..526,530..538)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270724"
     Region          636..>679
                     /region_name="S_TK_X"
                     /note="Extension to Ser/Thr-type protein kinases;
                     smart00133"
                     /db_xref="CDD:214529"
     CDS             1..686
                     /gene="PRKG1"
                     /coded_by="XM_041474547.1:217..2277"
                     /db_xref="GeneID:121357353"
ORIGIN      
        1 mgtlrdlqya lqekieelrq rdalidelel eldqkdeliq klqneldkyr svirpatqqa
       61 qqqsagtlqg eqrtkrqais aeptafdiqd lshvtlpfyp kspqskelik eaildndfmk
      121 nlelsqiqei vdcmypveyg kdsciikegd vgslvyvmed gkvevtkegv klctmgpgkv
      181 fgelailync trtatvktlv nvklwaidrq cfqtimmrtg likhteymef lksvptfqsl
      241 peeilsklad vleethyesg eyiirqgarg dtffiiskgk vnvtredsps edpvflrtlg
      301 kgdwfgekal qgedvrtanv iaaeavtclv idrdsfkhli gglddvsnka yedaeakaky
      361 eaeaaffanl klsdfniidt lgvggfgrve lvqlkseeak tfamkilkkr hivdtrqqeh
      421 irsekqimqs ahsdfivrly rtfkdskyly mlmeaclgge lwtilrdrgs fedsttrfyt
      481 acvveafayl hskgiiyrdl kpenlildhr gyaklvdfgf akkigfgkkt wtfcgtpeyv
      541 apeiilnkgh disadywslg ilmyelltgs ppfsgpdpmk tyniilrgid miefpkkiak
      601 naanlikklc rdnpserlgn lkngvkdiqk hkwfegfnwe glrkgtltpp iipsvasptd
      661 tsnfdsfped sdepppddns gwdidf
//
LOCUS       XP_041330491             671 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-dependent protein kinase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330491
VERSION     XP_041330491.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474557.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..671
                     /product="cGMP-dependent protein kinase 1 isoform X2"
                     /calculated_mol_wt=76167
     Region          3..48
                     /region_name="DD_cGKI-alpha"
                     /note="Dimerization/Docking domain of Cyclic GMP-dependent
                     Protein Kinase I alpha; cd12085"
                     /db_xref="CDD:213374"
     Site            order(4..5,8,11..12,15..16,19,22..23,26,29..30,33,36..37,
                     40..41,43..44,48)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:213374"
     Site            order(20..21,23,25)
                     /site_type="other"
                     /note="putative GKAP docking site [polypeptide binding]"
                     /db_xref="CDD:213374"
     Region          103..212
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(167..168,177..179)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(199..201,205..207)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          222..326
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(291..292,301..303)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Region          366..626
                     /region_name="STKc_cGK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     cGMP-dependent protein kinase (cGK or PKG); cd05572"
                     /db_xref="CDD:270724"
     Site            order(366..370,374,388,390,422,438..439,441,445,447,484,
                     486,488..489,491,501..502,505,518..523,550,556,559)
                     /site_type="active"
                     /db_xref="CDD:270724"
     Site            order(366..370,374,388,390,422,439..441,445,484,486,
                     488..489,491,501..502)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270724"
     Site            order(370,445,447,484,486,488,505,518..523,550,556,559)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270724"
     Site            order(501..511,515..523)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270724"
     Region          621..>664
                     /region_name="S_TK_X"
                     /note="Extension to Ser/Thr-type protein kinases;
                     smart00133"
                     /db_xref="CDD:214529"
     CDS             1..671
                     /gene="PRKG1"
                     /coded_by="XM_041474557.1:572..2587"
                     /db_xref="GeneID:121357353"
ORIGIN      
        1 mtelegdftk llllkeerik elerrlgekd eeiqelrrrl hkcqsvlpap sphigprttr
       61 aqgisaepqt yrsfhdlrqa frkftkgers kelikeaild ndfmknlels qiqeivdcmy
      121 pveygkdsci ikegdvgslv yvmedgkvev tkegvklctm gpgkvfgela ilynctrtat
      181 vktlvnvklw aidrqcfqti mmrtglikht eymeflksvp tfqslpeeil skladvleet
      241 hyesgeyiir qgargdtffi iskgkvnvtr edspsedpvf lrtlgkgdwf gekalqgedv
      301 rtanviaaea vtclvidrds fkhliggldd vsnkayedae akakyeaeaa ffanlklsdf
      361 niidtlgvgg fgrvelvqlk seeaktfamk ilkkrhivdt rqqehirsek qimqsahsdf
      421 ivrlyrtfkd skylymlmea clggelwtil rdrgsfedst trfytacvve afaylhskgi
      481 iyrdlkpenl ildhrgyakl vdfgfakkig fgkktwtfcg tpeyvapeii lnkghdisad
      541 ywslgilmye lltgsppfsg pdpmktynii lrgidmiefp kkiaknaanl ikklcrdnps
      601 erlgnlkngv kdiqkhkwfe gfnweglrkg tltppiipsv asptdtsnfd sfpedsdepp
      661 pddnsgwdid f
//
LOCUS       XP_041330509             528 aa            linear   VRT 06-MAY-2021
DEFINITION  vesicular acetylcholine transporter [Pyrgilauda ruficollis].
ACCESSION   XP_041330509
VERSION     XP_041330509.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474575.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..528
                     /product="vesicular acetylcholine transporter"
                     /calculated_mol_wt=55552
     Region          43..457
                     /region_name="MFS_SLC18A3_VAChT"
                     /note="Vesicular acetylcholine transporter (VAChT) and
                     similar transporters of the Major Facilitator Superfamily;
                     cd17383"
                     /db_xref="CDD:340941"
     Site            order(53..54,57..58,61,128,178..179,181..183,186,207,
                     210..211,214,285,288..289,292..294,297,325,329,378..379,
                     383,387,408,411..412,415..416,419)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340941"
     CDS             1..528
                     /gene="SLC18A3"
                     /coded_by="XM_041474575.1:22..1608"
                     /db_xref="GeneID:121357362"
ORIGIN      
        1 mseaggagra raaverlsea vgerrrrlgt amgearrqrr lllmvvcval lldnmlymvi
       61 vpiipdyiaa mrggggtagp sapaggngsg ggnrsllpar yppasgsned vqigvlfask
      121 amlqllvnpl sgtlidrvgy eapllaglav lflstatfaf aenyatlfaa rslqglgsaf
      181 adtagialia dryaeepars ralgtalaci sfgslaappf ggvlyefagk rvpflvlacv
      241 clldgllllv lappggtgar anmpvgtpih rlmidpyiav vagalatcni plafleptia
      301 nwmkdsmgas ewevgltwlp affphvlgvy vtvqlaaayp hlqwfygalg maiigasscl
      361 vpacrnfgqv iiplcgicfg ialvdtallp tlaflvdvrh vsvygsvyai adisycvaya
      421 lgpivagqiv htmgfaqlnl gmglanvlya pvllflknvc qmkpshsern illeegpkgl
      481 ydtikmeerk gmgknlqpag emdengmgsy hrdlkgvsee dssdyeys
//
LOCUS       XP_041330518            1010 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamate receptor ionotropic, delta-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330518
VERSION     XP_041330518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1010
                     /product="glutamate receptor ionotropic, delta-1"
                     /calculated_mol_wt=112637
     Region          25..426
                     /region_name="PBP1_iGluR_delta_1"
                     /note="N-terminal leucine-isoleucine-valine binding
                     protein (LIVBP)-like domain of the delta1 receptor of an
                     orphan glutamate receptor family; cd06392"
                     /db_xref="CDD:380615"
     Site            order(71..73,77..78,97,100,104..105,108,131..132,164,169,
                     174..176,179,182..183,186,191,193..196,220,351..355)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380615"
     Region          437..807
                     /region_name="PBP2_iGluR_delta_1"
                     /note="The ligand-binding domain of an orphan ionotropic
                     glutamate receptor delta-1, a member of the type 2
                     periplasmic-binding fold protein superfamily; cd13730"
                     /db_xref="CDD:270448"
     Site            order(493,520..522,527,540,686..688,742..743)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:270448"
     CDS             1..1010
                     /gene="GRID1"
                     /coded_by="XM_041474584.1:37..3069"
                     /db_xref="GeneID:121357369"
ORIGIN      
        1 mevlmlwlfp wifqcvsvra dsiihigaif egnaakddev fkqavsdlnl nddilqseki
       61 tysikliean npfhavqeac dlmtlgilal vtstgcasan alqsltdamh iphlfvqrst
      121 ggsprtacql npsledeeyt laarppvrln dvmlklvtel rwqkfivfyd sdydirglqg
      181 fldqasrlgl dvslqkvdrn isrvfsnlft tmkteelnry rdtlrraill lsprgaqtfi
      241 neavetnlas kdshwvyvne eitdneilel vhsalgrmtv irqifplard nnqrcmrnnh
      301 rissllcdpq egylqmlqvs nlylydsvlm lanafhrkle drkwhsmasl ncmrkstkpw
      361 nggrsmleti kkghitgltg vmefredgan pyvqfeilgt sysetfgkdv rrlatwdsek
      421 glngslqerr lgndlqgvtl kvvtvleepf vmvaenilgq pkrykgfsid vldalaknlg
      481 fkyeiyqapd gkyghqlqns swngmigeli nkradlaisa ititperesv vdfskrymdy
      541 svgilikkpe ekinifslfa pfdfavwaci aaaipivgvl ifvlnriqav raqgaaqpsp
      601 svsstlhsai wvvygafvqq ggestvnsva mrivmgswwl ftlivcssyt anlaafltvs
      661 rmdnpirtfq dlskqmdisy gtvrdsavye yfkakgtnpl eqdntfaelw rtisknngad
      721 ncvsnpsegi rkakkgnyaf lwdvtvveya altddecsvt vignsisskg ygialqhgsp
      781 yrdlfsqril elqesgdldv lkqkwwprmg rcdlnshtna qtdgkalklh sfagvfcila
      841 iglllaclva alelwwnsnr chqetpkedk evnleqvhrr mnslidedia hkqispasie
      901 isaleiggmq paqtlepvre yqntqlsvst flpeqtthga srtltaasgs nlplplsssa
      961 tmpsiqckhr spngglfrqs pvktpipmsf qsvpggvipe amepshgtsi
//
LOCUS       XP_041330530             550 aa            linear   VRT 06-MAY-2021
DEFINITION  putative threonine dehydratase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330530
VERSION     XP_041330530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..550
                     /product="putative threonine dehydratase isoform X1"
                     /calculated_mol_wt=60753
     Region          148..452
                     /region_name="Thr-dehyd"
                     /note="Threonine dehydratase: The first step in amino acid
                     degradation is the removal of nitrogen. Although the
                     nitrogen atoms of most amino acids are transferred to
                     alpha-ketoglutarate before removal, the alpha-amino group
                     of threonine can be directly...; cd01562"
                     /db_xref="CDD:107205"
     Site            order(148..149,152,155..156,186..187,334..335,406,
                     409..410,413,417..419,451..452)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:107205"
     Site            order(194,221,320..322,324..325,449)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107205"
     Site            194
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107205"
     Region          475..545
                     /region_name="ACT_ThrD-II-like"
                     /note="C-terminal ACT domain of biodegradative (catabolic)
                     threonine dehydratase II (ThrD-II) and other related ACT
                     domains; cd04886"
                     /db_xref="CDD:153158"
     CDS             1..550
                     /gene="LOC121357379"
                     /coded_by="XM_041474596.1:203..1855"
                     /db_xref="GeneID:121357379"
ORIGIN      
        1 mvsprgppra rptdmttpgp llppygvvvg vllrlvvylv avlysyaeql flkkddnrik
       61 kqdvpavcdl hcckdvpvrn gligqkppsi nperlkdfge edylngdvkt wemkivsrne
      121 ellrdalsci pqpgsrtsle scnrlirfed isaaafkiqc gvqktpcmys rlsklygmdi
      181 ylkkeflqyt gsvkergvly llmslpqeqq rkgvivasds nfsmavayha selrvpvfvi
      241 lststaparv rmcrdygamv isygttakds qvharrlaqe ngylyleeed savylsglgt
      301 vglemyeqvp kldavifpag ghcgllagsa aalkhlnpni svigvesetf pvlqqslkag
      361 hpnddqacnn hhfygdvsgv cfgsnslqlt gklvdkvvav reedilisml rlleyeratv
      421 daegaiglaa lvagklpelk gkrvavvics gnlelhllqq ciaraltldn rvcrfslvis
      481 dcpgdmskll eilareearv ldikqertfv tselftvevi ctvetrdkih taqlrnalle
      541 ryptvawter
//
LOCUS       XP_041330540             541 aa            linear   VRT 06-MAY-2021
DEFINITION  putative threonine dehydratase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330540
VERSION     XP_041330540.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474606.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..541
                     /product="putative threonine dehydratase isoform X2"
                     /calculated_mol_wt=59700
     Region          139..443
                     /region_name="Thr-dehyd"
                     /note="Threonine dehydratase: The first step in amino acid
                     degradation is the removal of nitrogen. Although the
                     nitrogen atoms of most amino acids are transferred to
                     alpha-ketoglutarate before removal, the alpha-amino group
                     of threonine can be directly...; cd01562"
                     /db_xref="CDD:107205"
     Site            order(139..140,143,146..147,177..178,325..326,397,
                     400..401,404,408..410,442..443)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:107205"
     Site            order(185,212,311..313,315..316,440)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107205"
     Site            185
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107205"
     Region          466..536
                     /region_name="ACT_ThrD-II-like"
                     /note="C-terminal ACT domain of biodegradative (catabolic)
                     threonine dehydratase II (ThrD-II) and other related ACT
                     domains; cd04886"
                     /db_xref="CDD:153158"
     CDS             1..541
                     /gene="LOC121357379"
                     /coded_by="XM_041474606.1:203..1828"
                     /db_xref="GeneID:121357379"
ORIGIN      
        1 mvsprgppra rptdmttpgp llppygvvvg vllrlvvylv avlyrddnri kkqdvpavcd
       61 lhcckdvpvr ngligqkpps inperlkdfg eedylngdvk twemkivsrn eellrdalsc
      121 ipqpgsrtsl escnrlirfe disaaafkiq cgvqktpcmy srlsklygmd iylkkeflqy
      181 tgsvkergvl yllmslpqeq qrkgvivasd snfsmavayh aselrvpvfv ilststapar
      241 vrmcrdygam visygttakd sqvharrlaq engylyleee dsavylsglg tvglemyeqv
      301 pkldavifpa gghcgllags aaalkhlnpn isvigveset fpvlqqslka ghpnddqacn
      361 nhhfygdvsg vcfgsnslql tgklvdkvva vreedilism lrlleyerat vdaegaigla
      421 alvagklpel kgkrvavvic sgnlelhllq qciaraltld nrvcrfslvi sdcpgdmskl
      481 leilareear vldikqertf vtselftvev ictvetrdki htaqlrnall eryptvawte
      541 r
//
LOCUS       XP_041330548             539 aa            linear   VRT 06-MAY-2021
DEFINITION  putative threonine dehydratase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041330548
VERSION     XP_041330548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..539
                     /product="putative threonine dehydratase isoform X3"
                     /calculated_mol_wt=60235
     Region          137..441
                     /region_name="Thr-dehyd"
                     /note="Threonine dehydratase: The first step in amino acid
                     degradation is the removal of nitrogen. Although the
                     nitrogen atoms of most amino acids are transferred to
                     alpha-ketoglutarate before removal, the alpha-amino group
                     of threonine can be directly...; cd01562"
                     /db_xref="CDD:107205"
     Site            order(137..138,141,144..145,175..176,323..324,395,
                     398..399,402,406..408,440..441)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:107205"
     Site            order(183,210,309..311,313..314,438)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107205"
     Site            183
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107205"
     Region          464..534
                     /region_name="ACT_ThrD-II-like"
                     /note="C-terminal ACT domain of biodegradative (catabolic)
                     threonine dehydratase II (ThrD-II) and other related ACT
                     domains; cd04886"
                     /db_xref="CDD:153158"
     CDS             1..539
                     /gene="LOC121357379"
                     /coded_by="XM_041474614.1:126..1745"
                     /db_xref="GeneID:121357379"
ORIGIN      
        1 mnfaaqfiys rvlknrsprd ryrededydp fwqsyaeqlf lkkddnrikk qdvpavcdlh
       61 cckdvpvrng ligqkppsin perlkdfgee dylngdvktw emkivsrnee llrdalscip
      121 qpgsrtsles cnrlirfedi saaafkiqcg vqktpcmysr lsklygmdiy lkkeflqytg
      181 svkergvlyl lmslpqeqqr kgvivasdsn fsmavayhas elrvpvfvil ststaparvr
      241 mcrdygamvi sygttakdsq vharrlaqen gylyleeeds avylsglgtv glemyeqvpk
      301 ldavifpagg hcgllagsaa alkhlnpnis vigvesetfp vlqqslkagh pnddqacnnh
      361 hfygdvsgvc fgsnslqltg klvdkvvavr eedilismlr lleyeratvd aegaiglaal
      421 vagklpelkg krvavvicsg nlelhllqqc iaraltldnr vcrfslvisd cpgdmsklle
      481 ilareearvl dikqertfvt selftvevic tvetrdkiht aqlrnaller yptvawter
//
LOCUS       XP_041330557             530 aa            linear   VRT 06-MAY-2021
DEFINITION  putative threonine dehydratase isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041330557
VERSION     XP_041330557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..530
                     /product="putative threonine dehydratase isoform X4"
                     /calculated_mol_wt=59183
     Region          128..432
                     /region_name="Thr-dehyd"
                     /note="Threonine dehydratase: The first step in amino acid
                     degradation is the removal of nitrogen. Although the
                     nitrogen atoms of most amino acids are transferred to
                     alpha-ketoglutarate before removal, the alpha-amino group
                     of threonine can be directly...; cd01562"
                     /db_xref="CDD:107205"
     Site            order(128..129,132,135..136,166..167,314..315,386,
                     389..390,393,397..399,431..432)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:107205"
     Site            order(174,201,300..302,304..305,429)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:107205"
     Site            174
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:107205"
     Region          455..525
                     /region_name="ACT_ThrD-II-like"
                     /note="C-terminal ACT domain of biodegradative (catabolic)
                     threonine dehydratase II (ThrD-II) and other related ACT
                     domains; cd04886"
                     /db_xref="CDD:153158"
     CDS             1..530
                     /gene="LOC121357379"
                     /coded_by="XM_041474623.1:126..1718"
                     /db_xref="GeneID:121357379"
ORIGIN      
        1 mnfaaqfiys rvlknrsprd ryrededydp fwqrddnrik kqdvpavcdl hcckdvpvrn
       61 gligqkppsi nperlkdfge edylngdvkt wemkivsrne ellrdalsci pqpgsrtsle
      121 scnrlirfed isaaafkiqc gvqktpcmys rlsklygmdi ylkkeflqyt gsvkergvly
      181 llmslpqeqq rkgvivasds nfsmavayha selrvpvfvi lststaparv rmcrdygamv
      241 isygttakds qvharrlaqe ngylyleeed savylsglgt vglemyeqvp kldavifpag
      301 ghcgllagsa aalkhlnpni svigvesetf pvlqqslkag hpnddqacnn hhfygdvsgv
      361 cfgsnslqlt gklvdkvvav reedilisml rlleyeratv daegaiglaa lvagklpelk
      421 gkrvavvics gnlelhllqq ciaraltldn rvcrfslvis dcpgdmskll eilareearv
      481 ldikqertfv tselftvevi ctvetrdkih taqlrnalle ryptvawter
//
LOCUS       XP_041330571             428 aa            linear   VRT 06-MAY-2021
DEFINITION  SH2 domain-containing protein 4B [Pyrgilauda ruficollis].
ACCESSION   XP_041330571
VERSION     XP_041330571.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474637.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..428
                     /product="SH2 domain-containing protein 4B"
                     /calculated_mol_wt=50659
     Region          <100..350
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          314..416
                     /region_name="SH2_SH2D4B"
                     /note="Src homology 2 domain found in the SH2 domain
                     containing protein 4B (SH2D4B); cd10351"
                     /db_xref="CDD:198214"
     Site            order(329,347,367,369)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198214"
     Site            order(368,397)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198214"
     CDS             1..428
                     /gene="SH2D4B"
                     /coded_by="XM_041474637.1:92..1378"
                     /db_xref="GeneID:121357396"
ORIGIN      
        1 mlqqilrdmy idpellaeln eeqkqilfyk mreeqlrrwr ereekarmee avlrktarrn
       61 qsngkrvqwl rgkdgevwvw vmgeapgdkp yeqiseelia erarqqaqke aeelwrqkea
      121 eitkkfrdam aqekarivae kwkiemedrk aakleeekiq eelkkreeee rqkgeelirq
      181 qeeirakely lslkqaqqhs qhsdddqewe eqlrrskaad eershkarra rdeyrrqslr
      241 aiqkgrvagl shlfqgtnls ndqeiklnnn saspllspav ssniwerpsr pfsrdviirw
      301 fkeeqiprra gferstnria qwfhgiisrq eaeellmnks egaflvrvse kiwgyalsyr
      361 qqngfkhflv dasgdfysfl gvdpnrhptl tdlidfhkde iitssggell lepcgqqknp
      421 pdysplfe
//
LOCUS       XP_041330584             436 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-GDP dissociation stimulator 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330584
VERSION     XP_041330584.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474650.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="rap1 GTPase-GDP dissociation stimulator 1-like"
                     /calculated_mol_wt=47643
     Region          6..36
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          44..82
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          148..>427
                     /region_name="PRK14707"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:173170"
     Region          <356..430
                     /region_name="V-ATPase_H_C"
                     /note="V-ATPase subunit H; pfam11698"
                     /db_xref="CDD:432010"
     CDS             1..436
                     /gene="LOC121357402"
                     /coded_by="XM_041474650.1:123..1433"
                     /db_xref="GeneID:121357402"
ORIGIN      
        1 mkkpcieadl vltliplles tdqemllhag raigricynn rnlqeelvkv gvipslvqil
       61 tdyaqseplv hvallalynl adldsakeal smtkvaeqlv kqlrraeshe rfeivfevlq
      121 alaendtlkv qlvdagvpev lseillrlqg ssqaedtciv ksasdlivsl llgdgnclrl
      181 lqlgvihqll dllekhvrsg dtsvqqaals alqslavpvv skvqmleegv aerieallrs
      241 esppvqfkll gtlrmladgq adaaeilgqd plllnrlvqw csvsdhsgic geanrllasi
      301 lhhnrsqevv kaiqaaqgvk hlvsmttseh aamqnealna laiasaidle tleesfkesq
      361 lvqslhkllr ddntspevky nslgllcrll nsgdlrqeie edkikdtleq lcshsnadvv
      421 keaittlqvl rgetph
//
LOCUS       XP_041330595            1105 aa            linear   VRT 06-MAY-2021
DEFINITION  proto-oncogene tyrosine-protein kinase receptor Ret [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330595
VERSION     XP_041330595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1105
                     /product="proto-oncogene tyrosine-protein kinase receptor
                     Ret"
                     /calculated_mol_wt=124888
     Region          20..143
                     /region_name="RET_CLD1"
                     /note="RET Cadherin like domain 1; pfam17756"
                     /db_xref="CDD:465485"
     Site            order(167..168,219,221,253,255..256)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          187..259
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          254..370
                     /region_name="RET_CLD3"
                     /note="RET Cadherin like domain 3; pfam17812"
                     /db_xref="CDD:465516"
     Region          394..497
                     /region_name="RET_CLD4"
                     /note="RET Cadherin like domain 4; pfam17813"
                     /db_xref="CDD:465517"
     Region          714..1003
                     /region_name="PTKc_RET"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     REarranged during Transfection protein; cd05045"
                     /db_xref="CDD:173631"
     Site            order(721..725,729,747,749,795..796,798,802,865,869..870,
                     872,883,901..905,914,948)
                     /site_type="active"
                     /db_xref="CDD:173631"
     Site            order(721..724,729,747,749,795..796,798,802,872,883)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173631"
     Site            order(865,869,901..905,914,948)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173631"
     Site            882..907
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173631"
     CDS             1..1105
                     /gene="RET"
                     /coded_by="XM_041474661.1:212..3529"
                     /db_xref="GeneID:121357411"
ORIGIN      
        1 mrsaartaaf lllcgvalgl yfprkeylen vyidepagtp llrihalrds reevahfhlc
       61 qnlivprarp qennlfqire etgllylsks ldgedfnmls vgnwmplskv mlyvflsshp
      121 fqekecdsat ratvllslin atapacsslt arqlcftemd lsfqikenkp pgtfhqlrlp
      181 svhhlcqnls isykllaaeg apfrynentt svrvtqrldr eereryelia kctvreglre
      241 mqvevpflvn vldeddsppf lpngtdtada vvefnrkegt vlstltvyda dttpiyples
      301 srkkytgtii tddpwisetf rvehifdeih fspngsqvrg trheyklvln ksisvtehrs
      361 fqldvlvndt efhgpersvm lhfnvsilpv siqfsnityq ftvnrnaerf aqvgkicien
      421 cmkfrgvnit ykllspnssc ypvnilqgre dkfgslyvnd ssvlrrpeck eiqytvqatd
      481 kqsrkhtktl ltvvlegtll kkeedcpdsc aiskhraece ecgglgvltg rcqwrqgsgk
      541 gittnystct psiktcpdgi cdvvegkdpa vcpqdctsgn iigghgkgig nlgiksghgi
      601 cycfprqncy cekddikeql cddlcktvit gavvlcfvis vlvsfycihr yhknspkppi
      661 asaemtfrrp aqsypisyss snvrrpslds menqvsvdtf kipedpkwef prknlvlgkt
      721 lgegefgkvv katafrlkgr agyttvavkm lkenasqsel rdllsefnll kqvnhphvik
      781 lygacsqdgp lyliveyaky gslrsflres rkvgpsyvgs dgnrnssyld npderaltmg
      841 dlisfawqis rgmqylaemk lvhrdlaarn vlvaegrkmk isdfglsrdv yeedsyvkrs
      901 kgripvkwma ieslfdhiyt tqsdvwsfgv llweivtlgg npypgiaper lfnllktgyr
      961 merpencsee mynlmlrcwk qeadkrptft eiskelekmm vksrdyldla astpsdslly
     1021 ddglseeetp lvdcnnaplp rtlpstwien klygmsypnw peespvpltr fdgtnsvfsr
     1081 yandsvyanw mvshsaakfm dkfds
//
LOCUS       XP_041330610             222 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121357415 [Pyrgilauda ruficollis].
ACCESSION   XP_041330610
VERSION     XP_041330610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474676.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="uncharacterized protein LOC121357415"
                     /calculated_mol_wt=24234
     CDS             1..222
                     /gene="LOC121357415"
                     /coded_by="XM_041474676.1:184..852"
                     /db_xref="GeneID:121357415"
ORIGIN      
        1 mfgsclpwkt livlslvill adfteirvaa drsecksati ddvngslkky seclpeiiae
       61 gekasinfla wtlqetldll rpvqeqfckq lppcprpvpp kngglvcvti dntqyckpmc
      121 nkgydfqflr rsrlyemcgn atgfswttql vgekalavcn psevavsgak sayfpsnstc
      181 vhtlafpeaq aeqlniflqe igergidgsg rdqgadcvtc gy
//
LOCUS       XP_041330620             439 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-neuregulin-3, membrane-bound isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041330620
VERSION     XP_041330620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..439
                     /product="pro-neuregulin-3, membrane-bound isoform"
                     /calculated_mol_wt=48863
     Region          <5..74
                     /region_name="PHA02887"
                     /note="EGF-like protein; Provisional"
                     /db_xref="CDD:165214"
     CDS             1..439
                     /gene="NRG3"
                     /coded_by="XM_041474686.1:48..1367"
                     /db_xref="GeneID:121357423"
ORIGIN      
        1 mqlgeiyspq laltqqkntt tystersehf kpckdkdlay clnegecfvi etltgshkhc
       61 rckegyqgvr cdqflpktds ilsdptdhlg iefmeseevy qrqvlsiaci vfgivvvgml
      121 caafyfktkk qtkqiheqlk etqnrktysl nassmmakse cmaqsqvqlq nyskpdrhpg
      181 pilhkvmess fsgtqsfpea lspdrgtqpi khhrslsscc spgqksgmlh rnafrrtppl
      241 prgrfngitg payqqlqesr itdqdtipch gysssglktp qnpsinmqlp srettpyfnn
      301 vdqkdlvsys ssransvpii psvgldeacm qmqnvpevtg ikwcknsysa elvnvsspvs
      361 ncliaeqhev kvlletvqeq irmltdarra edlelasvaa qsgasentaf lpmsptakae
      421 reaqfvlksd tqrdsvlak
//
LOCUS       XP_041330637             132 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S24 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330637
VERSION     XP_041330637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="40S ribosomal protein S24 isoform X1"
                     /calculated_mol_wt=15194
     Region          1..130
                     /region_name="PTZ00071"
                     /note="40S ribosomal protein S24; Provisional"
                     /db_xref="CDD:240256"
     CDS             1..132
                     /gene="RPS24"
                     /coded_by="XM_041474703.1:97..495"
                     /db_xref="GeneID:121357436"
ORIGIN      
        1 mndtvtirtr kfmtnrllqr kqmvidvlhp gkatvpktei reklakmykt tpdvifvfgf
       61 rthfgggktt gfgmiydsld yakknepkhr larhglyekk ktsrkqrker knrmkkvrgt
      121 akanvgagkk kk
//
LOCUS       XP_041330643             131 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S24 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330643
VERSION     XP_041330643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="40S ribosomal protein S24 isoform X2"
                     /calculated_mol_wt=15066
     Region          1..130
                     /region_name="PTZ00071"
                     /note="40S ribosomal protein S24; Provisional"
                     /db_xref="CDD:240256"
     CDS             1..131
                     /gene="RPS24"
                     /coded_by="XM_041474709.1:98..493"
                     /db_xref="GeneID:121357436"
ORIGIN      
        1 mndtvtirtr kfmtnrllqr kqmvidvlhp gkatvpktei reklakmykt tpdvifvfgf
       61 rthfgggktt gfgmiydsld yakknepkhr larhglyekk ktsrkqrker knrmkkvrgt
      121 akanvgagkk k
//
LOCUS       XP_041330651             130 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S24 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041330651
VERSION     XP_041330651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474717.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..130
                     /product="40S ribosomal protein S24 isoform X3"
                     /calculated_mol_wt=14938
     Region          1..130
                     /region_name="PTZ00071"
                     /note="40S ribosomal protein S24; Provisional"
                     /db_xref="CDD:240256"
     CDS             1..130
                     /gene="RPS24"
                     /coded_by="XM_041474717.1:97..489"
                     /db_xref="GeneID:121357436"
ORIGIN      
        1 mndtvtirtr kfmtnrllqr kqmvidvlhp gkatvpktei reklakmykt tpdvifvfgf
       61 rthfgggktt gfgmiydsld yakknepkhr larhglyekk ktsrkqrker knrmkkvrgt
      121 akanvgagkk
//
LOCUS       XP_041330663             244 aa            linear   VRT 06-MAY-2021
DEFINITION  2-aminoethanethiol dioxygenase [Pyrgilauda ruficollis].
ACCESSION   XP_041330663
VERSION     XP_041330663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..244
                     /product="2-aminoethanethiol dioxygenase"
                     /calculated_mol_wt=26100
     Region          39..242
                     /region_name="PCO_ADO"
                     /note="pfam07847"
                     /db_xref="CDD:462286"
     CDS             1..244
                     /gene="ADO"
                     /coded_by="XM_041474729.1:39..773"
                     /db_xref="GeneID:121357458"
ORIGIN      
        1 mprdnmasli qrvarqarit frspagpafg enlhrlqqll devraedlhl aprgpsaaaa
       61 ggdppwagvv ppvsymhice tesfsmgvfl lrsgaciplh dhpgmngmlk vlygtlriac
      121 mdtlpagaaa appppaagsg pclralfrsr qqytrasppc llsphtdnlh qidavdgpaa
      181 fldilappyd pqhgrdchyy rllegppaga eppalprevw lvetpqaadf wcggepypgp
      241 rvcl
//
LOCUS       XP_041330689             362 aa            linear   VRT 06-MAY-2021
DEFINITION  outer mitochondrial transmembrane helix translocase isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041330689
VERSION     XP_041330689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474755.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="outer mitochondrial transmembrane helix
                     translocase isoform X1"
                     /calculated_mol_wt=40857
     Region          4..345
                     /region_name="SpoVK"
                     /note="AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell
                     wall/membrane/envelope biogenesis, Cell cycle control,
                     cell division, chromosome partitioning, Signal
                     transduction mechanisms]; COG0464"
                     /db_xref="CDD:440232"
     Region          92..257
                     /region_name="RecA-like_ATAD1"
                     /note="ATPase domain of ATPase family AAA
                     domain-containing protein 1 and similar ATPase domains;
                     cd19520"
                     /db_xref="CDD:410928"
     Site            order(93..96,135..141)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410928"
     CDS             1..362
                     /gene="ATAD1"
                     /coded_by="XM_041474755.1:184..1272"
                     /db_xref="GeneID:121357479"
ORIGIN      
        1 mvhaeafsrp lsrnevvgli frltifgavt yftikwmvda idptrkqkve aqkqaeklmk
       61 qigvknvklt eyemsiaahl vdplsmhvtw sdiaglddvi tdlkdtvilp ikkkylfens
      121 rllqppkgvl lygppgcgkt liakatakea gcrfinlqps tltdkwyges qklaaavfsl
      181 aiklqpsiif ideidsflrn rsstdheata mmkaqfmslw dgldtdyncq vivmgatnrp
      241 qdldsaimrr mptrfhinqp alkqreailk lilknenvds hvdllqvake tdgfsgsdlk
      301 emcrdaallc vreyvnnace edvhdedeir pvqqqdlhra iekmrkskdv smqnlameiv
      361 fd
//
LOCUS       XP_041330698             352 aa            linear   VRT 06-MAY-2021
DEFINITION  outer mitochondrial transmembrane helix translocase isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041330698
VERSION     XP_041330698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="outer mitochondrial transmembrane helix
                     translocase isoform X2"
                     /calculated_mol_wt=39706
     Region          92..257
                     /region_name="RecA-like_ATAD1"
                     /note="ATPase domain of ATPase family AAA
                     domain-containing protein 1 and similar ATPase domains;
                     cd19520"
                     /db_xref="CDD:410928"
     Site            order(93..96,135..141)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410928"
     Region          282..327
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     CDS             1..352
                     /gene="ATAD1"
                     /coded_by="XM_041474764.1:185..1243"
                     /db_xref="GeneID:121357479"
ORIGIN      
        1 mvhaeafsrp lsrnevvgli frltifgavt yftikwmvda idptrkqkve aqkqaeklmk
       61 qigvknvklt eyemsiaahl vdplsmhvtw sdiaglddvi tdlkdtvilp ikkkylfens
      121 rllqppkgvl lygppgcgkt liakatakea gcrfinlqps tltdkwyges qklaaavfsl
      181 aiklqpsiif ideidsflrn rsstdheata mmkaqfmslw dgldtdyncq vivmgatnrp
      241 qdldsaimrr mptrfhinqp alkqreailk lilknenvds hvdllqvake tdgfsgsdlk
      301 emcrdaallc vrdhdedeir pvqqqdlhra iekmrkskdv smqnlameiv fd
//
LOCUS       XP_041330712             321 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial ribosome-associated GTPase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330712
VERSION     XP_041330712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="mitochondrial ribosome-associated GTPase 1"
                     /calculated_mol_wt=35627
     Region          31..321
                     /region_name="GTPase_YlqF"
                     /note="ribosome biogenesis GTP-binding protein YlqF;
                     TIGR03596"
                     /db_xref="CDD:274669"
     CDS             1..321
                     /gene="MTG1"
                     /coded_by="XM_041474778.1:165..1130"
                     /db_xref="GeneID:121357489"
ORIGIN      
        1 mrvwaalraa gtgpgtfrer fefggrdvas wfprhmakgl rqmrlalrra dclvevhdar
       61 iplsgrnpal qealgirphv lvlnkmdlad prrqpavleq lrqqgcshvv ftdcqrdvnv
      121 kkvipmvarl vadgpryhra essehnilvi gvpnvgkssl inslrrlhlk kgnatavgge
      181 pgitkavlsr iqvcekplmy lvdtpgvlpp rlgdvetgmk lalcgaihdh lvgedimady
      241 llytlnkqqq fryvqryglg qpcdhiepll khvalsqgrt qkvkvltgtg nvnmmmlnyp
      301 aaayeflrdf ragrlgrvtl d
//
LOCUS       XP_041330724             447 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal N(1)-acetyl-spermine/spermidine oxidase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330724
VERSION     XP_041330724.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474790.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..447
                     /product="peroxisomal N(1)-acetyl-spermine/spermidine
                     oxidase"
                     /calculated_mol_wt=49251
     Region          1..436
                     /region_name="PLN02568"
                     /note="polyamine oxidase"
                     /db_xref="CDD:215308"
     CDS             1..447
                     /gene="PAOX"
                     /coded_by="XM_041474790.1:296..1639"
                     /db_xref="GeneID:121357498"
ORIGIN      
        1 mgahwihgps pgnpvfclas rygllgpeaa reenqqveag ghppmpsvty gssgkvlnpk
       61 avreardlfy allastrafq gskeppwpsv gqyvraeiar tvptmaggqe darrlqlavl
      121 aaclklecci sgthsmdlvg lepfgeyvsl pgldctfpgg ysslaerlls dlpegtvlfn
      181 kavrtihwqg sfreegddgr vfpvrveced gdvfladhvi itvplgflke hhqeffqppl
      241 perkaqavrn lgfgtnnkif lefeqpfwep ehqllevvwe despleepda dleanwfkkl
      301 igfvvlqppe qhghvlcgfi agkesehmet lsdaevlsam trvlrtmtgn pdlpaprsvl
      361 rsrwhsapyt rgsysyvavg ssgddidvla qplpedprdp rplqllfage athrtfystt
      421 hgallsgwre aerlnqlfqa pvpapqs
//
LOCUS       XP_041330740            2045 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large homolog 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330740
VERSION     XP_041330740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2045
                     /product="disks large homolog 5 isoform X1"
                     /calculated_mol_wt=230142
     Region          9..85
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          128..213
                     /region_name="Takusan"
                     /note="pfam04822"
                     /db_xref="CDD:461445"
     Region          <241..674
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          692..786
                     /region_name="PDZ1_DLG5-like"
                     /note="PDZ domain 1 of Discs Large 5 (Dlg5) and related
                     domains; cd06764"
                     /db_xref="CDD:467245"
     Site            order(711..717,734,737,765,769,772..773)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467245"
     Region          798..874
                     /region_name="PDZ2_DLG5-like"
                     /note="PDZ domain 2 of Discs Large 5 (Dlg5) and related
                     domains; cd06765"
                     /db_xref="CDD:467246"
     Site            order(806..812,818,821,851,855,858..859)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467246"
     Region          <1055..1297
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1464..1545
                     /region_name="PDZ3_DLG5-like"
                     /note="PDZ domain 3 of Discs Large 5 (Dlg5) and related
                     domains; cd06767"
                     /db_xref="CDD:467248"
     Site            order(1477..1483,1493,1496,1525,1529,1532..1533)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467248"
     Region          1545..1625
                     /region_name="dbPDZ_assoc"
                     /note="Unstructured region between two PDZ domains on
                     Dlg5; pfam16610"
                     /db_xref="CDD:465197"
     Region          1625..1705
                     /region_name="PDZ4_DLG5-like"
                     /note="PDZ domain 4 of Discs Large 5 (Dlg5) and related
                     domains; cd06766"
                     /db_xref="CDD:467247"
     Site            order(1637..1643,1653,1656,1684,1688,1691..1692)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467247"
     Region          1723..1785
                     /region_name="SH3_DLG5"
                     /note="Src homology 3 domain of Disks Large homolog 5;
                     cd11860"
                     /db_xref="CDD:212794"
     Site            order(1725,1742..1743)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212794"
     Site            order(1728,1730,1733,1737,1759..1760,1778,1780..1781)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212794"
     Region          1858..2034
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..2045
                     /gene="DLG5"
                     /coded_by="XM_041474806.1:22..6159"
                     /db_xref="GeneID:121357502"
ORIGIN      
        1 mepkhkella qcrqslaqam tevdkvvell eaagalsprd lrdleaagsg kaellialll
       61 gkerdhfqdl rvalektqph llsilylngv agtpaaaeta gstysvlsim psdsessssl
      121 ssigttgkas spppvvdtrq msekletily qlrqvtrerd elrkqlalss pgstfddcrp
      181 spkpnhdyer lkiqcmkams dlqslqnqht ktlkrceeaa keadfyhtlh srllsdqsql
      241 kedmdtlkrk ntqlvrehnh lqqsceemkr lhdedqkeit dlrsqqqqvm kqngsseiln
      301 klydtamdkl egvkkdydal rkrynekias hntdlsrleq aeeenrrlqk qidmlmkqrd
      361 taihfqqqys sslrrfesvq qelssataqn kelqremerl qsevtrfktm qlkatkdaek
      421 ykeerdsvfn eyrlimserd qvikevdklq telelaeskl kntssekrva seemealrqe
      481 lnsalverdr aicernelle kychevkdka eaqkeldqac kdietvkeer dvarkertea
      541 iiqrdhllre yyqarqiqds atldierank eiemlrkqye amsqelkeav qeaevakcrr
      601 dwafqerdki vaeresirtl cdnlrrerdr avsdlaealr nlddmrkqkn davrelkelk
      661 ekmenqleke arfrqlmahs shdsaidtds lewetevvef ekdrddmdlk algfdvaegv
      721 nepylpgdcg ifvtkvdkgs iadgrlrvnd wllkindvdl tnkdkkqvik avlngggvin
      781 mvvrrrkslg grvitplhin vsghkdsgvs lengvfvaav vpgspaakeg sltvgdriia
      841 ingialdnks lteceallrn crdsltlslm kvfpqsssws gqnifenlkd pekisncrvh
      901 aseiqaqnkr nlklnsstqt difnpdvmdg kkeqsdqgst sfcdhkpfps ntlrvdsrrn
      961 tvhschsnse hslssfspet ygdqgygavd ldnrrlpyep tgtdcvmvet afdkghgakh
     1021 sggtwpkvmv nisaaetekf svykkpkqrk sifdpdtfkr pptppkldyl spnqvtghsp
     1081 qpskaevast pptppkrsds ikfkhkqqas sasestvttg spptspataq apvslalkqd
     1141 satlkgrsrn aghyyreegi dcthlssrks ceddigfqrv eepeikrprp ksapalrhkm
     1201 tpvpipnpal qvqkyapase ehlspelqew apyspkrstr hsdgfvpaal ypgsmpaagt
     1261 vprslapcpa vtavmrnpiy tawshrvhts ncpsvasqic hqhlhpssqh qgrlsldlsh
     1321 khsndysens rtrashgsns lpssarlgss snlqyrteri kipltprypr smmgsdrgsl
     1381 shsecsspsl itppqsplnl etssftssqs qnslstlpri sispvsvger rkdrylfrnr
     1441 sflripvapr prfsslrslr pymeeprhvk vqkgseplgi sivsgenggi fvskvtggsi
     1501 ahqagleygd qllefnginl rnateqqarl iigqqcdtit ilaqynphmy qlgnhsrsss
     1561 rlepvsnhst pqgsgaatpd nhsvidtvse qdegtmtpps kqttpttspr nslrgpvdtn
     1621 krtpeprivv vkksqvdlgi qicggnlygi fvsdvdddsp akgpdglvlg dmileygsid
     1681 mrnktaeeay lemlkpgeni kiktqyriee fnkikelpgd gfyiralydr vaemeqdlsf
     1741 kkddilyvdd tlpqgnfgcw mawqldenaq klergqipsk ymmdqefyrr hsmseakden
     1801 sssktlsaaa rrsffrrkhk hkrsgskdgk dllaldtist dsipflddsa slayqrvqkv
     1861 dctsprpvli lgplldavkd mlvkespgkf crcplevmka sqqaiergvk dclfidykrr
     1921 sghfdvttva sikeitekdc hclldiapha ierlhsvhiy pivifirykn akqikeqkdp
     1981 vflrdkvtqk hskeqfetaq kieqeyskyf tgivqggals sictqimttv dqeqnkvlwi
     2041 pagpl
//
LOCUS       XP_041330748            2044 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large homolog 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330748
VERSION     XP_041330748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2044
                     /product="disks large homolog 5 isoform X2"
                     /calculated_mol_wt=230070
     Region          9..85
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          128..213
                     /region_name="Takusan"
                     /note="pfam04822"
                     /db_xref="CDD:461445"
     Region          <241..674
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          692..786
                     /region_name="PDZ1_DLG5-like"
                     /note="PDZ domain 1 of Discs Large 5 (Dlg5) and related
                     domains; cd06764"
                     /db_xref="CDD:467245"
     Site            order(711..717,734,737,765,769,772..773)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467245"
     Region          798..874
                     /region_name="PDZ2_DLG5-like"
                     /note="PDZ domain 2 of Discs Large 5 (Dlg5) and related
                     domains; cd06765"
                     /db_xref="CDD:467246"
     Site            order(806..812,818,821,851,855,858..859)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467246"
     Region          <1062..1339
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1463..1544
                     /region_name="PDZ3_DLG5-like"
                     /note="PDZ domain 3 of Discs Large 5 (Dlg5) and related
                     domains; cd06767"
                     /db_xref="CDD:467248"
     Site            order(1476..1482,1492,1495,1524,1528,1531..1532)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467248"
     Region          1544..1624
                     /region_name="dbPDZ_assoc"
                     /note="Unstructured region between two PDZ domains on
                     Dlg5; pfam16610"
                     /db_xref="CDD:465197"
     Region          1624..1704
                     /region_name="PDZ4_DLG5-like"
                     /note="PDZ domain 4 of Discs Large 5 (Dlg5) and related
                     domains; cd06766"
                     /db_xref="CDD:467247"
     Site            order(1636..1642,1652,1655,1683,1687,1690..1691)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467247"
     Region          1722..1784
                     /region_name="SH3_DLG5"
                     /note="Src homology 3 domain of Disks Large homolog 5;
                     cd11860"
                     /db_xref="CDD:212794"
     Site            order(1724,1741..1742)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212794"
     Site            order(1727,1729,1732,1736,1758..1759,1777,1779..1780)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212794"
     Region          1857..2033
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..2044
                     /gene="DLG5"
                     /coded_by="XM_041474814.1:22..6156"
                     /db_xref="GeneID:121357502"
ORIGIN      
        1 mepkhkella qcrqslaqam tevdkvvell eaagalsprd lrdleaagsg kaellialll
       61 gkerdhfqdl rvalektqph llsilylngv agtpaaaeta gstysvlsim psdsessssl
      121 ssigttgkas spppvvdtrq msekletily qlrqvtrerd elrkqlalss pgstfddcrp
      181 spkpnhdyer lkiqcmkams dlqslqnqht ktlkrceeaa keadfyhtlh srllsdqsql
      241 kedmdtlkrk ntqlvrehnh lqqsceemkr lhdedqkeit dlrsqqqqvm kqngsseiln
      301 klydtamdkl egvkkdydal rkrynekias hntdlsrleq aeeenrrlqk qidmlmkqrd
      361 taihfqqqys sslrrfesvq qelssataqn kelqremerl qsevtrfktm qlkatkdaek
      421 ykeerdsvfn eyrlimserd qvikevdklq telelaeskl kntssekrva seemealrqe
      481 lnsalverdr aicernelle kychevkdka eaqkeldqac kdietvkeer dvarkertea
      541 iiqrdhllre yyqarqiqds atldierank eiemlrkqye amsqelkeav qeaevakcrr
      601 dwafqerdki vaeresirtl cdnlrrerdr avsdlaealr nlddmrkqkn davrelkelk
      661 ekmenqleke arfrqlmahs shdsaidtds lewetevvef ekdrddmdlk algfdvaegv
      721 nepylpgdcg ifvtkvdkgs iadgrlrvnd wllkindvdl tnkdkkqvik avlngggvin
      781 mvvrrrkslg grvitplhin vsghkdsgvs lengvfvaav vpgspaakeg sltvgdriia
      841 ingialdnks lteceallrn crdsltlslm kvfpqsssws gqnifenlkd pekisncrvh
      901 aseiqaqnkr nlklnsstqt difnpdvmdg kkeqsdqgst sfcdhkpfps ntlrvdsrrn
      961 tvhschsnse hslssfspet ygdqgygavd ldnrrlpyep tgtdcvmvet afdkghgakh
     1021 sggtwpkvmv nisaaetekf svykkpkqrk sifdpdtfkr pptppkldyl spnqvtghsp
     1081 qpskaevast pptppkrsds ikfkhkqqas sasestvttg spptspataq apvslalkqd
     1141 satlkgrsrn aghyyreegi dcthlssrks ceddigfqrv eepeikrprp ksapalrhkm
     1201 tpvpipnpal qvqkyapase ehlspelqew apyspkrstr hsdgfvpaal ypgsmpagtv
     1261 prslapcpav tavmrnpiyt awshrvhtsn cpsvasqich qhlhpssqhq grlsldlshk
     1321 hsndysensr trashgsnsl pssarlgsss nlqyrterik ipltpryprs mmgsdrgsls
     1381 hsecsspsli tppqsplnle tssftssqsq nslstlpris ispvsvgerr kdrylfrnrs
     1441 flripvaprp rfsslrslrp ymeeprhvkv qkgseplgis ivsgenggif vskvtggsia
     1501 hqagleygdq llefnginlr nateqqarli igqqcdtiti laqynphmyq lgnhsrsssr
     1561 lepvsnhstp qgsgaatpdn hsvidtvseq degtmtppsk qttpttsprn slrgpvdtnk
     1621 rtpeprivvv kksqvdlgiq icggnlygif vsdvdddspa kgpdglvlgd mileygsidm
     1681 rnktaeeayl emlkpgenik iktqyrieef nkikelpgdg fyiralydrv aemeqdlsfk
     1741 kddilyvddt lpqgnfgcwm awqldenaqk lergqipsky mmdqefyrrh smseakdens
     1801 ssktlsaaar rsffrrkhkh krsgskdgkd llaldtistd sipflddsas layqrvqkvd
     1861 ctsprpvlil gplldavkdm lvkespgkfc rcplevmkas qqaiergvkd clfidykrrs
     1921 ghfdvttvas ikeitekdch clldiaphai erlhsvhiyp ivifirykna kqikeqkdpv
     1981 flrdkvtqkh skeqfetaqk ieqeyskyft givqggalss ictqimttvd qeqnkvlwip
     2041 agpl
//
LOCUS       XP_041330758            2019 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large homolog 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041330758
VERSION     XP_041330758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2019
                     /product="disks large homolog 5 isoform X3"
                     /calculated_mol_wt=226954
     Region          9..85
                     /region_name="CARD"
                     /note="Caspase activation and recruitment domain: a
                     protein-protein interaction domain; cd01671"
                     /db_xref="CDD:260018"
     Region          128..213
                     /region_name="Takusan"
                     /note="pfam04822"
                     /db_xref="CDD:461445"
     Region          <241..674
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          692..786
                     /region_name="PDZ1_DLG5-like"
                     /note="PDZ domain 1 of Discs Large 5 (Dlg5) and related
                     domains; cd06764"
                     /db_xref="CDD:467245"
     Site            order(711..717,734,737,765,769,772..773)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467245"
     Region          798..874
                     /region_name="PDZ2_DLG5-like"
                     /note="PDZ domain 2 of Discs Large 5 (Dlg5) and related
                     domains; cd06765"
                     /db_xref="CDD:467246"
     Site            order(806..812,818,821,851,855,858..859)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467246"
     Region          <1055..1297
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1438..1519
                     /region_name="PDZ3_DLG5-like"
                     /note="PDZ domain 3 of Discs Large 5 (Dlg5) and related
                     domains; cd06767"
                     /db_xref="CDD:467248"
     Site            order(1451..1457,1467,1470,1499,1503,1506..1507)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467248"
     Region          1519..1599
                     /region_name="dbPDZ_assoc"
                     /note="Unstructured region between two PDZ domains on
                     Dlg5; pfam16610"
                     /db_xref="CDD:465197"
     Region          1599..1679
                     /region_name="PDZ4_DLG5-like"
                     /note="PDZ domain 4 of Discs Large 5 (Dlg5) and related
                     domains; cd06766"
                     /db_xref="CDD:467247"
     Site            order(1611..1617,1627,1630,1658,1662,1665..1666)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467247"
     Region          1697..1759
                     /region_name="SH3_DLG5"
                     /note="Src homology 3 domain of Disks Large homolog 5;
                     cd11860"
                     /db_xref="CDD:212794"
     Site            order(1699,1716..1717)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212794"
     Site            order(1702,1704,1707,1711,1733..1734,1752,1754..1755)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212794"
     Region          1832..2008
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     CDS             1..2019
                     /gene="DLG5"
                     /coded_by="XM_041474824.1:22..6081"
                     /db_xref="GeneID:121357502"
ORIGIN      
        1 mepkhkella qcrqslaqam tevdkvvell eaagalsprd lrdleaagsg kaellialll
       61 gkerdhfqdl rvalektqph llsilylngv agtpaaaeta gstysvlsim psdsessssl
      121 ssigttgkas spppvvdtrq msekletily qlrqvtrerd elrkqlalss pgstfddcrp
      181 spkpnhdyer lkiqcmkams dlqslqnqht ktlkrceeaa keadfyhtlh srllsdqsql
      241 kedmdtlkrk ntqlvrehnh lqqsceemkr lhdedqkeit dlrsqqqqvm kqngsseiln
      301 klydtamdkl egvkkdydal rkrynekias hntdlsrleq aeeenrrlqk qidmlmkqrd
      361 taihfqqqys sslrrfesvq qelssataqn kelqremerl qsevtrfktm qlkatkdaek
      421 ykeerdsvfn eyrlimserd qvikevdklq telelaeskl kntssekrva seemealrqe
      481 lnsalverdr aicernelle kychevkdka eaqkeldqac kdietvkeer dvarkertea
      541 iiqrdhllre yyqarqiqds atldierank eiemlrkqye amsqelkeav qeaevakcrr
      601 dwafqerdki vaeresirtl cdnlrrerdr avsdlaealr nlddmrkqkn davrelkelk
      661 ekmenqleke arfrqlmahs shdsaidtds lewetevvef ekdrddmdlk algfdvaegv
      721 nepylpgdcg ifvtkvdkgs iadgrlrvnd wllkindvdl tnkdkkqvik avlngggvin
      781 mvvrrrkslg grvitplhin vsghkdsgvs lengvfvaav vpgspaakeg sltvgdriia
      841 ingialdnks lteceallrn crdsltlslm kvfpqsssws gqnifenlkd pekisncrvh
      901 aseiqaqnkr nlklnsstqt difnpdvmdg kkeqsdqgst sfcdhkpfps ntlrvdsrrn
      961 tvhschsnse hslssfspet ygdqgygavd ldnrrlpyep tgtdcvmvet afdkghgakh
     1021 sggtwpkvmv nisaaetekf svykkpkqrk sifdpdtfkr pptppkldyl spnqvtghsp
     1081 qpskaevast pptppkrsds ikfkhkqqas sasestvttg spptspataq apvslalkqd
     1141 satlkgrsrn aghyyreegi dcthlssrks ceddigfqrv eepeikrprp ksapalrhkm
     1201 tpvpipnpal qvqkyapase ehlspelqew apyspkrstr hsdgfvpaal ypgsmpaagt
     1261 vprslapcpa vtavmrnpiy tawshrvhts ncpsvasqic hqhlhpssqh qgrlsldlsh
     1321 khsndysens rtrashgsns lpssarlgss snlqyrteri kipltprypr smmgsdrgsl
     1381 shsecsspsl itppqsplnl etssftssqs qnslstlpri sispvsvger rkdrpymeep
     1441 rhvkvqkgse plgisivsge nggifvskvt ggsiahqagl eygdqllefn ginlrnateq
     1501 qarliigqqc dtitilaqyn phmyqlgnhs rsssrlepvs nhstpqgsga atpdnhsvid
     1561 tvseqdegtm tppskqttpt tsprnslrgp vdtnkrtpep rivvvkksqv dlgiqicggn
     1621 lygifvsdvd ddspakgpdg lvlgdmiley gsidmrnkta eeaylemlkp genikiktqy
     1681 rieefnkike lpgdgfyira lydrvaemeq dlsfkkddil yvddtlpqgn fgcwmawqld
     1741 enaqklergq ipskymmdqe fyrrhsmsea kdensssktl saaarrsffr rkhkhkrsgs
     1801 kdgkdllald tistdsipfl ddsaslayqr vqkvdctspr pvlilgplld avkdmlvkes
     1861 pgkfcrcple vmkasqqaie rgvkdclfid ykrrsghfdv ttvasikeit ekdchclldi
     1921 aphaierlhs vhiypivifi ryknakqike qkdpvflrdk vtqkhskeqf etaqkieqey
     1981 skyftgivqg galssictqi mttvdqeqnk vlwipagpl
//
LOCUS       XP_041330772             295 aa            linear   VRT 06-MAY-2021
DEFINITION  RPE-retinal G protein-coupled receptor isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330772
VERSION     XP_041330772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="RPE-retinal G protein-coupled receptor isoform
                     X1"
                     /calculated_mol_wt=33077
     Region          17..276
                     /region_name="7tmA_Retinal_GPR"
                     /note="retinal G protein coupled receptor, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15072"
                     /db_xref="CDD:320200"
     Region          18..44
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320200"
     Region          51..77
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320200"
     Region          88..118
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320200"
     Site            order(91,95..96,99..100,161..164,180..181,185,224,228,251,
                     255)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320200"
     Region          126..146
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320200"
     Region          173..202
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320200"
     Region          204..234
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320200"
     Region          244..269
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320200"
     CDS             1..295
                     /gene="RGR"
                     /coded_by="XM_041474838.1:96..983"
                     /db_xref="GeneID:121357511"
ORIGIN      
        1 mvtahplpeg fteievfaig tallveallg fclngltiis frkikelrtp snllvlsial
       61 adcgicinaf iaafssflry wpygsdgcqi hgfhgfltal asisssaava wdryhhyctr
      121 srlqwstaas mmvfawlfaa fwsvmpllgw geydyeplrt cctldyskgd rnyvtflfal
      181 stfnfmipgf imltayqsih qkfrktghfk fntglplktl vicwgpycll csyaavenvm
      241 fippkyrmip aliaktvptv dafvyalgne nyrggiwqfl tgqkiekaev dnktk
//
LOCUS       XP_041330780             257 aa            linear   VRT 06-MAY-2021
DEFINITION  RPE-retinal G protein-coupled receptor isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330780
VERSION     XP_041330780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="RPE-retinal G protein-coupled receptor isoform
                     X2"
                     /calculated_mol_wt=28742
     Region          17..238
                     /region_name="7tmA_Retinal_GPR"
                     /note="retinal G protein coupled receptor, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15072"
                     /db_xref="CDD:320200"
     Region          18..44
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320200"
     Region          51..77
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320200"
     Region          88..118
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320200"
     Site            order(91,95..96,99..100,161..164,180..181,185,213,217)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320200"
     Region          126..146
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320200"
     Region          173..202
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320200"
     Region          211..231
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320200"
     CDS             1..257
                     /gene="RGR"
                     /coded_by="XM_041474846.1:96..869"
                     /db_xref="GeneID:121357511"
ORIGIN      
        1 mvtahplpeg fteievfaig tallveallg fclngltiis frkikelrtp snllvlsial
       61 adcgicinaf iaafssflry wpygsdgcqi hgfhgfltal asisssaava wdryhhyctr
      121 srlqwstaas mmvfawlfaa fwsvmpllgw geydyeplrt cctldyskgd rnyvtflfal
      181 stfnfmipgf imltayqsih qkfrktghfk ipaliaktvp tvdafvyalg nenyrggiwq
      241 fltgqkieka evdnktk
//
LOCUS       XP_041330793             256 aa            linear   VRT 06-MAY-2021
DEFINITION  exosome complex component RRP40 [Pyrgilauda ruficollis].
ACCESSION   XP_041330793
VERSION     XP_041330793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="exosome complex component RRP40"
                     /calculated_mol_wt=27303
     Region          89..174
                     /region_name="S1_Rrp40"
                     /note="Rrp40 S1-like RNA-binding domain. S1-like
                     RNA-binding domains are found in a wide variety of
                     RNA-associated proteins. Rrp4 protein is a subunit of the
                     exosome complex. The exosome plays a central role in 3' to
                     5' RNA processing and degradation in...; cd05790"
                     /db_xref="CDD:240216"
     Site            order(89,113,117..118,140..142)
                     /site_type="other"
                     /note="subunit interface [polypeptide binding]"
                     /db_xref="CDD:240216"
     Site            order(103,111,121,123)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:240216"
     Region          177..254
                     /region_name="KH-I_Rrp40"
                     /note="type I K homology (KH) RNA-binding domain found in
                     exosome complex component Rrp40 and similar proteins;
                     cd22526"
                     /db_xref="CDD:411954"
     Site            order(177..179,229)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411954"
     CDS             1..256
                     /gene="EXOSC3"
                     /coded_by="XM_041474859.1:38..808"
                     /db_xref="GeneID:121357522"
ORIGIN      
        1 maaergaaae alvgqvvlpg dllllpahyd edaegerlrl sagtapqgrl lcgpglrrsg
       61 agllvtkcgl lrhrpgggga ywvdsqqkry vpvkgdhvig ivtakagdvf rldvggsepa
      121 slsylafega tkrnrpnvqv gdliygqfvv ankdmepemv cidssgkssg mgiigqdgfl
      181 fkvslglirk llapkceiiq elsqlypfel vlgmngriwv kaktvqqtli ivnileacey
      241 mtaeqrkqal aklsgn
//
LOCUS       XP_041330807             228 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxiredoxin-like 2A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330807
VERSION     XP_041330807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="peroxiredoxin-like 2A isoform X1"
                     /calculated_mol_wt=25189
     Region          53..205
                     /region_name="PRX_like2"
                     /note="Peroxiredoxin (PRX)-like 2 family; hypothetical
                     proteins that show sequence similarity to PRXs. Members of
                     this group contain a CXXC motif, similar to TRX. The
                     second cysteine in the motif corresponds to the
                     peroxidatic cysteine of PRX, however, these...; cd02970"
                     /db_xref="CDD:239268"
     Site            order(89,92)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:239268"
     CDS             1..228
                     /gene="PRXL2A"
                     /coded_by="XM_041474873.1:203..889"
                     /db_xref="GeneID:121357527"
ORIGIN      
        1 mgsemsflpd lgaftmgmws vglgaigaav tgivlantdl flskpekatl efleeielkt
       61 lgserrtfka gelwkengav imavrrpguf lcreeasels slkpqlsklg vplyavvkek
      121 igtevedfqh yfkgeifldq kkgfygprrr kmmlsgffrl gvwqnffraw rsgysgnleg
      181 egftlggvyv igagrqgvll ehrekefgdk vslpsvleaa ekikpqas
//
LOCUS       XP_041330817             224 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxiredoxin-like 2A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330817
VERSION     XP_041330817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..224
                     /product="peroxiredoxin-like 2A isoform X2"
                     /calculated_mol_wt=24785
     Region          49..201
                     /region_name="PRX_like2"
                     /note="Peroxiredoxin (PRX)-like 2 family; hypothetical
                     proteins that show sequence similarity to PRXs. Members of
                     this group contain a CXXC motif, similar to TRX. The
                     second cysteine in the motif corresponds to the
                     peroxidatic cysteine of PRX, however, these...; cd02970"
                     /db_xref="CDD:239268"
     Site            order(85,88)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:239268"
     CDS             1..224
                     /gene="PRXL2A"
                     /coded_by="XM_041474883.1:154..828"
                     /db_xref="GeneID:121357527"
ORIGIN      
        1 msflpdlgaf tmgmwsvglg aigaavtgiv lantdlflsk pekatlefle eielktlgse
       61 rrtfkagelw kengavimav rrpguflcre easelsslkp qlsklgvply avvkekigte
      121 vedfqhyfkg eifldqkkgf ygprrrkmml sgffrlgvwq nffrawrsgy sgnlegegft
      181 lggvyvigag rqgvllehre kefgdkvslp svleaaekik pqas
//
LOCUS       XP_041330827             224 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxiredoxin-like 2A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330827
VERSION     XP_041330827.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474893.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..224
                     /product="peroxiredoxin-like 2A isoform X2"
                     /calculated_mol_wt=24785
     Region          49..201
                     /region_name="PRX_like2"
                     /note="Peroxiredoxin (PRX)-like 2 family; hypothetical
                     proteins that show sequence similarity to PRXs. Members of
                     this group contain a CXXC motif, similar to TRX. The
                     second cysteine in the motif corresponds to the
                     peroxidatic cysteine of PRX, however, these...; cd02970"
                     /db_xref="CDD:239268"
     Site            order(85,88)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:239268"
     CDS             1..224
                     /gene="PRXL2A"
                     /coded_by="XM_041474893.1:99..773"
                     /db_xref="GeneID:121357527"
ORIGIN      
        1 msflpdlgaf tmgmwsvglg aigaavtgiv lantdlflsk pekatlefle eielktlgse
       61 rrtfkagelw kengavimav rrpguflcre easelsslkp qlsklgvply avvkekigte
      121 vedfqhyfkg eifldqkkgf ygprrrkmml sgffrlgvwq nffrawrsgy sgnlegegft
      181 lggvyvigag rqgvllehre kefgdkvslp svleaaekik pqas
//
LOCUS       XP_041330841             205 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase F, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330841
VERSION     XP_041330841.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474907.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="peptidyl-prolyl cis-trans isomerase F,
                     mitochondrial"
                     /calculated_mol_wt=21463
     Region          44..202
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(94..95,100,151,153,161)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..205
                     /gene="PPIF"
                     /coded_by="XM_041474907.1:111..728"
                     /db_xref="GeneID:121357536"
ORIGIN      
        1 mlalsaarrl lrppgdllpp pglasmwaag trgcsgagag spnpvvyldv gadnqplgrv
       61 vlelkadvvp ktaenfralc tgekgfgykg stfhrvipsf mcqggdftnh ngtggksiyg
      121 srfpdenfil khvgpgvlsm anagpntngs qffictaktd wldgkhvvfg hvkegmdvvk
      181 kiesfgsksg kpskkiiitd cgqls
//
LOCUS       XP_041330855            1313 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosome biogenesis protein BMS1 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041330855
VERSION     XP_041330855.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474921.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1313
                     /product="ribosome biogenesis protein BMS1 homolog"
                     /calculated_mol_wt=149716
     Region          1..1300
                     /region_name="BMS1"
                     /note="GTP-binding protein required for 40S ribosome
                     biogenesis [Translation, ribosomal structure and
                     biogenesis]; COG5192"
                     /db_xref="CDD:227519"
     CDS             1..1313
                     /gene="BMS1"
                     /coded_by="XM_041474921.1:159..4100"
                     /db_xref="GeneID:121357541"
ORIGIN      
        1 meekekkkhr akhsgpkaek krkrylndlg igdeenarkr npkaftvqsa vrmartfhrt
       61 qdlktkkhhi pvvdrtplep ppvvvvvvgp pkvgkstvik cliknftrqk lveirgpvti
      121 vsgkkrrlti iecgcdintm idlakvadlv lmlidasfgf emetfeflni cqvhgfpkim
      181 gvlthldtfk nnkqlkktkk klkhrfwtev ypgaklfyls gmvhgeyqkq eihnlgrfis
      241 vmkfrpltwq tshpyvladr meeltnpedv rinpkcdrki slygylrgah lknksqihmp
      301 gvgdftvsdv sflpdpcalp eqqkkrslne keklvyapls gvggivydkd avyidlggsh
      361 ahekeeeevr pnqelvqsli sthsaidvkm asskvslfmd saplgsedvg qefvmpkeer
      421 qvdlktgrvr rkavfedeek enddvasdde dnqeeedeee avsedgsdgd dendteeese
      481 rvllqegmav rrgkrlktev aqeeavnelp afadsdddle msseeegeta pedsemeede
      541 eeegdvqrtc ddessgsefe aaskraeskh cdmdsehtet ksqisehspk rkavlttdsg
      601 nctaeeases edentsleeg ddegasheel eaeesnrngf qhskakkads vrhtkvktvd
      661 tedddvenll reeeeyeeki dlsadttgal kwkedltqka aeaflrqqrs tpnlrklvyg
      721 tavededqes edaddelggl frvsrpdkas kqkanaldcs kflveklqdw dleevmssir
      781 dcfvtgkwed dkdaakllee deelygdfed letgvvhkgk aaaggeqsgs eeeeeedekm
      841 skpepeeeek kkermdkkrk lkemfdaeyd egdatyfddl keemhkqaql nraefedqdd
      901 etrvqyegfr pgmyvrieie nvpcefvlnf dphypiilgg lgnsegnvgy vqlrlkkhrw
      961 ykkilktrdp lilslgwrrf qtipmfyied hngrhrllky tpqhmhcgaa fwgpitpqgt
     1021 gflavqsvsg ttpdfriaat gvvldldksi tivkklkltg fpfkifkntc fikgmfnsql
     1081 evakfegaai rsvsgirgqi kkalrapvga fratfedkll msdivfvrtw ypvsipafyn
     1141 pvtsllkpag ekdswsgmkt tgqlryergi klkqnkdsly kpivrekrhf nklhipkalq
     1201 kalpfknkpk nlekkgktpk dqwrpavire phekkisall salstvnnyk inkakvkhre
     1261 qlkeylkvkq kedeqkfkrq keakkkvyri lgqrekkrqk sslkgsskge ksm
//
LOCUS       XP_041330868             865 aa            linear   VRT 06-MAY-2021
DEFINITION  cadherin-related family member 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330868
VERSION     XP_041330868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..865
                     /product="cadherin-related family member 1 isoform X1"
                     /calculated_mol_wt=95446
     Region          44..132
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(48..49,99,101,129,131..132)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          141..244
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(148..149,202,204,241,243..244)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          253..352
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(260..261,312,314,348,350..351)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          366..471
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(372..373,433,435,467,469..470)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          480..575
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(486..487,540,542,571,573..574)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          578..680
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..865
                     /gene="CDHR1"
                     /coded_by="XM_041474934.1:1..2598"
                     /db_xref="GeneID:121357543"
ORIGIN      
        1 mkhvrhftps lflslvhvcl vqanyapyff dngarstngn mallslsedt pvgthvytln
       61 gtdpegdpvt ygltyeagsr ryfsvdknlg nvtlieeldr ekedeveviv sisdglstvs
      121 ekvrilvmda ndespefint pyivqvpent pssssifkie aidkdtgsgg sityflqnih
      181 ankftidrhs gvlrikpgvt ldyeksrthf vvvvakdggg klrgdnkvfs atttvtinve
      241 dvqdtppmfi gtpyygyvye dtlagsevlt vvaldgdrgr pnsihysivn gsegsfeisn
      301 ttgaisviks pnqlkkevye lkvkasevsq egdisehtfa mvtirvvdln nhpptfygen
      361 gpqnrfeltm yehppegeil rglkitvnds dqganakfnl rlvgpggifr vvpqtvlnea
      421 qvtiivensa aidyesfkvl tfkllaievn tpekfsstad vvirlldtnd nvpkfssdyy
      481 iaripenspg gsnvvavtat dpdsglwgei kysiygtgad lflihpstgi iytqpwavld
      541 aevnskynfy vkaedtdgky slaevfitvl dvndhspefn eniqektmii gspvkieaid
      601 qdaeepnniv dysimqadpa nvfdidqstg eiklksyirs ldiihnitnn kdciwslvvq
      661 akdrgspsfs ttavlkidit eetlhkgpma aflmqtkdnp mkalgvlagv mgimvlitim
      721 istamfwrnk rsnkvmpvrr iikkrqvpps rtvrmewlkf krpsnaaekf vveedvkslh
      781 nensnnnvqv vpmlpaaplp ppppalaprg dpqawrvptv sgsltpkhvi kppkkkghss
      841 thnalvselk mrfekrnaaf gephi
//
LOCUS       XP_041330879             857 aa            linear   VRT 06-MAY-2021
DEFINITION  cadherin-related family member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330879
VERSION     XP_041330879.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474945.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..857
                     /product="cadherin-related family member 1 isoform X2"
                     /calculated_mol_wt=94454
     Region          36..124
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(40..41,91,93,121,123..124)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          133..236
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(140..141,194,196,233,235..236)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          245..344
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(252..253,304,306,340,342..343)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          358..463
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(364..365,425,427,459,461..462)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          472..567
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(478..479,532,534,563,565..566)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          570..672
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..857
                     /gene="CDHR1"
                     /coded_by="XM_041474945.1:13..2586"
                     /db_xref="GeneID:121357543"
ORIGIN      
        1 mllfgfcfvl iavqanyapy ffdngarstn gnmallslse dtpvgthvyt lngtdpegdp
       61 vtygltyeag srryfsvdkn lgnvtlieel drekedevev ivsisdglst vsekvrilvm
      121 dandespefi ntpyivqvpe ntpssssifk ieaidkdtgs ggsityflqn ihankftidr
      181 hsgvlrikpg vtldyeksrt hfvvvvakdg ggklrgdnkv fsatttvtin vedvqdtppm
      241 figtpyygyv yedtlagsev ltvvaldgdr grpnsihysi vngsegsfei snttgaisvi
      301 kspnqlkkev yelkvkasev sqegdiseht famvtirvvd lnnhpptfyg engpqnrfel
      361 tmyehppege ilrglkitvn dsdqganakf nlrlvgpggi frvvpqtvln eaqvtiiven
      421 saaidyesfk vltfkllaie vntpekfsst advvirlldt ndnvpkfssd yyiaripens
      481 pggsnvvavt atdpdsglwg eikysiygtg adlflihpst giiytqpwav ldaevnskyn
      541 fyvkaedtdg kyslaevfit vldvndhspe fneniqektm iigspvkiea idqdaeepnn
      601 ivdysimqad panvfdidqs tgeiklksyi rsldiihnit nnkdciwslv vqakdrgsps
      661 fsttavlkid iteetlhkgp maaflmqtkd npmkalgvla gvmgimvlit imistamfwr
      721 nkrsnkvmpv rriikkrqvp psrtvrmewl kfkrpsnaae kfvveedvks lhnensnnnv
      781 qvvpmlpaap lpppppalap rgdpqawrvp tvsgsltpkh vikppkkkgh ssthnalvse
      841 lkmrfekrna afgephi
//
LOCUS       XP_041330889             744 aa            linear   VRT 06-MAY-2021
DEFINITION  cadherin-related family member 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041330889
VERSION     XP_041330889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..744
                     /product="cadherin-related family member 1 isoform X3"
                     /calculated_mol_wt=82058
     Region          36..124
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(40..41,91,93,121,123..124)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          133..236
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(140..141,194,196,233,235..236)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          245..344
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(252..253,304,306,340,342..343)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          358..463
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(364..365,425,427,459,461..462)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          472..567
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(478..479,532,534,563,565..566)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          570..672
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..744
                     /gene="CDHR1"
                     /coded_by="XM_041474955.1:13..2247"
                     /db_xref="GeneID:121357543"
ORIGIN      
        1 mllfgfcfvl iavqanyapy ffdngarstn gnmallslse dtpvgthvyt lngtdpegdp
       61 vtygltyeag srryfsvdkn lgnvtlieel drekedevev ivsisdglst vsekvrilvm
      121 dandespefi ntpyivqvpe ntpssssifk ieaidkdtgs ggsityflqn ihankftidr
      181 hsgvlrikpg vtldyeksrt hfvvvvakdg ggklrgdnkv fsatttvtin vedvqdtppm
      241 figtpyygyv yedtlagsev ltvvaldgdr grpnsihysi vngsegsfei snttgaisvi
      301 kspnqlkkev yelkvkasev sqegdiseht famvtirvvd lnnhpptfyg engpqnrfel
      361 tmyehppege ilrglkitvn dsdqganakf nlrlvgpggi frvvpqtvln eaqvtiiven
      421 saaidyesfk vltfkllaie vntpekfsst advvirlldt ndnvpkfssd yyiaripens
      481 pggsnvvavt atdpdsglwg eikysiygtg adlflihpst giiytqpwav ldaevnskyn
      541 fyvkaedtdg kyslaevfit vldvndhspe fneniqektm iigspvkiea idqdaeepnn
      601 ivdysimqad panvfdidqs tgeiklksyi rsldiihnit nnkdciwslv vqakdrgsps
      661 fsttavlkid iteeiksrvk syilglkkrp wtiygicmsg vlstisvtmv istimywksv
      721 krsklhpqgk irkiirgppr rtvc
//
LOCUS       XP_041330903             270 aa            linear   VRT 06-MAY-2021
DEFINITION  tetraspanin-14 [Pyrgilauda ruficollis].
ACCESSION   XP_041330903
VERSION     XP_041330903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="tetraspanin-14"
                     /calculated_mol_wt=30516
     Region          16..258
                     /region_name="Tetraspanin"
                     /note="Tetraspanin family; pfam00335"
                     /db_xref="CDD:459767"
     Region          113..233
                     /region_name="TM4SF9_like_LEL"
                     /note="Tetraspanin, extracellular domain or large
                     extracellular loop (LEL), TM4SF9_like subfamily.
                     Tetraspanins are trans-membrane proteins with 4
                     trans-membrane segments. Both the N- and C-termini lie on
                     the intracellular side of the membrane. This alignment...;
                     cd03159"
                     /db_xref="CDD:239412"
     Site            order(114,119,123,125..126,129,143,146..147,150..151)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239412"
     CDS             1..270
                     /gene="TSPAN14"
                     /coded_by="XM_041474969.1:218..1030"
                     /db_xref="GeneID:121357553"
ORIGIN      
        1 mhyyrysnae vscwykyllf synivfwlag vaflaaglwa wsekgvlsdl tkvtglhgld
       61 pvvlvlvvgi vmftlgfagc vgalrenicl lkffcgtivf ifllelavav maflfqdwvr
      121 drvkeffenn iksyrddidl qniidslqri nhccgaqgpe dwdfniyfdc ksesksrekc
      181 gvpfsccipd paqkvvntqc gydirkksks qwddqifvkg cihaleawlp rniyivagvf
      241 iaisllqifg iflartlisd ieavkasnaf
//
LOCUS       XP_041330912             270 aa            linear   VRT 06-MAY-2021
DEFINITION  tetraspanin-14 [Pyrgilauda ruficollis].
ACCESSION   XP_041330912
VERSION     XP_041330912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474978.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="tetraspanin-14"
                     /calculated_mol_wt=30516
     Region          16..258
                     /region_name="Tetraspanin"
                     /note="Tetraspanin family; pfam00335"
                     /db_xref="CDD:459767"
     Region          113..233
                     /region_name="TM4SF9_like_LEL"
                     /note="Tetraspanin, extracellular domain or large
                     extracellular loop (LEL), TM4SF9_like subfamily.
                     Tetraspanins are trans-membrane proteins with 4
                     trans-membrane segments. Both the N- and C-termini lie on
                     the intracellular side of the membrane. This alignment...;
                     cd03159"
                     /db_xref="CDD:239412"
     Site            order(114,119,123,125..126,129,143,146..147,150..151)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239412"
     CDS             1..270
                     /gene="TSPAN14"
                     /coded_by="XM_041474978.1:63..875"
                     /db_xref="GeneID:121357553"
ORIGIN      
        1 mhyyrysnae vscwykyllf synivfwlag vaflaaglwa wsekgvlsdl tkvtglhgld
       61 pvvlvlvvgi vmftlgfagc vgalrenicl lkffcgtivf ifllelavav maflfqdwvr
      121 drvkeffenn iksyrddidl qniidslqri nhccgaqgpe dwdfniyfdc ksesksrekc
      181 gvpfsccipd paqkvvntqc gydirkksks qwddqifvkg cihaleawlp rniyivagvf
      241 iaisllqifg iflartlisd ieavkasnaf
//
LOCUS       XP_041330927             640 aa            linear   VRT 06-MAY-2021
DEFINITION  choline O-acetyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041330927
VERSION     XP_041330927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041474993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..640
                     /product="choline O-acetyltransferase"
                     /calculated_mol_wt=72596
     Region          26..605
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..640
                     /gene="CHAT"
                     /coded_by="XM_041474993.1:1..1923"
                     /db_xref="GeneID:121357563"
ORIGIN      
        1 mpdleknmqk nekdscskde revpklpvpp lqqtlhmylq cmkhlvpeeq fkktkaivek
       61 fgiagglges lqqmleerse ktinwvfnyw lddmylnnrl alpvnsspai ifarqyfkdi
      121 ndqlrfaanl isgvqdykal ldthalptdf srgqlsghpl cmkqyyglfs syrlpgltkd
      181 tlvaqksnvm pepehiivac nnqffvldvv infrrlsegd lftqlqkiak maeneeemlp
      241 pigllttdgr tewaearmtl mkdstnrdsl dmierciclv cldspsgvel nntnmafhml
      301 hgggyhknga nrwydkpmqf vvgrdglcgt vcehspfdgi vmvqcaeyll rhmkesskkl
      361 vradsvselp aprrlrwkcs pdiqthlasa aeklqraven ldfiaykfeh ygkefikkqk
      421 ispdayiqva lqlafyrchr rlvptyesas lrrfdegrve nirsataeaf afvkamagdk
      481 aavsdsekmq kfkdaiaaqt nysvlavtgm aidnhllglr evarehfkel peiftdetyl
      541 tsnrfilsts qvpttmemfc cygpvvpngy gacynpqpeh llfcissfke cketssdmfa
      601 kaveqslltm rdlcnkfssa takppakqda atqlqsdhqr
//
LOCUS       XP_041330938             396 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ZNF365 [Pyrgilauda ruficollis].
ACCESSION   XP_041330938
VERSION     XP_041330938.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475004.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..396
                     /product="protein ZNF365"
                     /calculated_mol_wt=44116
     Region          157..>284
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..396
                     /gene="ZNF365"
                     /coded_by="XM_041475004.1:296..1486"
                     /db_xref="GeneID:121357568"
ORIGIN      
        1 mqqtardegg hpwpeplggv slpfrcprcg dhtrfrslss lrvhleyshs fqessllars
       61 slfsplkdae lvsppepaaq gspgspggva aqpagpylnl ggascgsgkg eqprelaaer
      121 pgsylanyvs aespsevskp glpaadskas feahvrekfn rmveavdkti ekridkltke
      181 lsqktaelle vraafvqlsq kkqevqrrer alsrqvdvav emiaalkqrl seseeelhrk
      241 eeevvtfnhf leeaaekevr gkarlqrfie nllqrvdlae rqleyyqnqq mvcnhtdise
      301 hvftdislnk kprclsrgsq hasynipdak phsfqkgril lkkakdekas lqpvkcfyep
      361 vdcpreiwra qkkgepvcsa rkvsakskmg kkakpl
//
LOCUS       XP_041330951             407 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich acidic protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330951
VERSION     XP_041330951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..407
                     /product="proline-rich acidic protein 1 isoform X1"
                     /calculated_mol_wt=44083
     Region          329..372
                     /region_name="PRAP"
                     /note="Proline-rich acidic protein 1, pregnancy-specific
                     uterine; pfam15314"
                     /db_xref="CDD:464639"
     Region          363..406
                     /region_name="PRAP"
                     /note="Proline-rich acidic protein 1, pregnancy-specific
                     uterine; pfam15314"
                     /db_xref="CDD:464639"
     CDS             1..407
                     /gene="PRAP1"
                     /coded_by="XM_041475017.1:479..1702"
                     /db_xref="GeneID:121357577"
ORIGIN      
        1 mrlfphtgis gkgsrphatg dacrpwhvmv qrsgsspacs sllcsgpgvl tweflfpraq
       61 gprvpalavg nklkllmvsl lghqlfpesm gnkvfpswpv pdknpyfkpk lefpispeiv
      121 hwqedtdlpg eprgargamp lssgtwihlg pgvtlgmggs stwihpdqgg srgmgssktw
      181 lhpvppgchg agkvrgrcdk rqhgqvglcq prwarevlgq ggavatgmvw astghtacat
      241 tlchlsllhp rtmglrsvti llgtalllla pgstqalsss rwkdlateqd laeesilgvg
      301 apeegepgik vfsssawaqr gppqvqarpe edrdhlyrpq ddgreasarv pfwmpvpkvq
      361 ngpeedrdhl yhpqdnarev narmpfwmla pevqngpeed ldyihhg
//
LOCUS       XP_041330960             155 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich acidic protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330960
VERSION     XP_041330960.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475026.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="proline-rich acidic protein 1 isoform X2"
                     /calculated_mol_wt=17142
     Region          77..120
                     /region_name="PRAP"
                     /note="Proline-rich acidic protein 1, pregnancy-specific
                     uterine; pfam15314"
                     /db_xref="CDD:464639"
     Region          111..154
                     /region_name="PRAP"
                     /note="Proline-rich acidic protein 1, pregnancy-specific
                     uterine; pfam15314"
                     /db_xref="CDD:464639"
     CDS             1..155
                     /gene="PRAP1"
                     /coded_by="XM_041475026.1:1098..1565"
                     /db_xref="GeneID:121357577"
ORIGIN      
        1 mglrsvtill gtallllapg stqalsssrw kdlateqdla eesilgvgap eegepgikvf
       61 sssawaqrgp pqvqarpeed rdhlyrpqdd greasarvpf wmpvpkvqng peedrdhlyh
      121 pqdnarevna rmpfwmlape vqngpeedld yihhg
//
LOCUS       XP_041330973             299 aa            linear   VRT 06-MAY-2021
DEFINITION  enoyl-CoA hydratase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041330973
VERSION     XP_041330973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="enoyl-CoA hydratase, mitochondrial"
                     /calculated_mol_wt=31453
     Region          41..297
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     Site            order(67,69,101,105..109,146,148..150,172..173,176)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:119339"
     Site            order(107,150)
                     /site_type="active"
                     /note="oxyanion hole (OAH) forming residues [active]"
                     /db_xref="CDD:119339"
     Site            order(130,138,159..162,174..177,183,185..187,189..190,
                     195..196,198..199,201..202,205,216,219,234,237..238)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:119339"
     CDS             1..299
                     /gene="ECHS1"
                     /coded_by="XM_041475039.1:21..920"
                     /db_xref="GeneID:121357585"
ORIGIN      
        1 maaplrallr saaaaaalpr arlppplrap cgargcsaga afqyllvqkt gaqknvgliq
       61 lnrpqalnal ceglmaelrr aleamesdpe vgaivltgsq kafaagadik emqnktfqec
      121 yssgflagwd kvsvvrkpii aavngyalgg gcelammcdi iyagekaqfg qpeillgtip
      181 gaggtqrltr avgkslamem vltgdrisak eakeaglvsk vypvekllda aiacaekias
      241 nsklvtamak esvnaafett ltegnrtekr lfyatfatsd rkegmtafve krkanftds
//
LOCUS       XP_041330985             979 aa            linear   VRT 06-MAY-2021
DEFINITION  protein bicaudal C homolog 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041330985
VERSION     XP_041330985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475051.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..979
                     /product="protein bicaudal C homolog 1 isoform X1"
                     /calculated_mol_wt=105465
     Region          50..130
                     /region_name="KH-I_BICC1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in protein bicaudal C homolog 1 (BICC1) and similar
                     proteins; cd22420"
                     /db_xref="CDD:411848"
     Site            order(66,73..77,80..81,84..85,91..94)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411848"
     Region          135..204
                     /region_name="KH-I_BICC1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in protein bicaudal C homolog 1 (BICC1) and similar
                     proteins; cd22421"
                     /db_xref="CDD:411849"
     Site            order(146,148..150,152..156,159..160,163..164,169..172)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411849"
     Region          288..353
                     /region_name="KH-I_BICC1_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in protein bicaudal C homolog 1 (BICC1) and similar
                     proteins; cd22422"
                     /db_xref="CDD:411850"
     Site            order(298,300..302,304..308,311..312,315..316,321..324)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411850"
     Region          340..>395
                     /region_name="KH_10"
                     /note="GLD-3 KH domain 5; pfam17905"
                     /db_xref="CDD:407757"
     Region          878..941
                     /region_name="SAM_BICC1"
                     /note="SAM domain of BICC1 (bicaudal) subfamily; cd09520"
                     /db_xref="CDD:188919"
     CDS             1..979
                     /gene="BICC1"
                     /coded_by="XM_041475051.1:118..3057"
                     /db_xref="GeneID:121357594"
ORIGIN      
        1 maaqcdplsg ylpqplsdpg snsersadsp apgseedsag pprplhspew geerfrvdrk
       61 kleamlqaaa egkgksgedf fqkimeetnt qiawpsklki gakskkdphi kvsgkkenvk
      121 eakekimsvl dtksnrvtlk mdvshtehsh vigkggnnik kvmeetgchi hfpdsnrnnq
      181 aeksnqvsia gqpagvesar vrirellplv lmfelpiagi lqpipdpnsp tiqhvcqtyn
      241 isvsfkqrsr mygatvivrg sqnntsavke gtamllehla gslasaipvs tqldiaaqhh
      301 lfmmgrngsn ikhimqrtga qihfpdpsnp qkkstvylqg tiesvclarq ylmgclplvl
      361 mfdmkeeiev epqfitqlme qldvfisikp kpkqpsksvi vksvernaln myearkcllg
      421 lessgvtvvs npstvscpvg lscpgldils saglgltglg llgptalsvn tsttpnslln
      481 alnssvsplq spssgtpspt lwatslantn ttgfsaiphl mipstaqatl tsillsgvpn
      541 ygqntpsppp gltpvevhvn gmqseskkgs pslnghvkas nikyaalsat slgenvlsts
      601 hsdgvrqtsa hgaseqvaak anseegcnda fvevgmprsp shsantsdlk qmmssskqac
      661 akrqtvellq gtknshlhta drlraeaelg apespvadkk apgseraaer aaaaqqnser
      721 arlapqpsfv nmqafdyeqk kllatkamlk kpvvtevrtp tntwsglgfs ksmpaetike
      781 lrranhvsyk psmtttyegs smslsrsssr ehlgsgsesd nwrdrnglgp tahdfvssig
      841 spkrkqnksa ehylsssnym dcissltgsn gcslnslfkg sdlpelfskl glgkytdifq
      901 qqeidlqtfl tltdqdlkel gittfgarrk mllaiselnk nrrklfdpsn irasflegga
      961 sgrlprqyhs diasvsgrw
//
LOCUS       XP_041330994             853 aa            linear   VRT 06-MAY-2021
DEFINITION  protein bicaudal C homolog 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041330994
VERSION     XP_041330994.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475060.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..853
                     /product="protein bicaudal C homolog 1 isoform X2"
                     /calculated_mol_wt=91710
     Region          9..78
                     /region_name="KH-I_BICC1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in protein bicaudal C homolog 1 (BICC1) and similar
                     proteins; cd22421"
                     /db_xref="CDD:411849"
     Site            order(20,22..24,26..30,33..34,37..38,43..46)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411849"
     Region          162..227
                     /region_name="KH-I_BICC1_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in protein bicaudal C homolog 1 (BICC1) and similar
                     proteins; cd22422"
                     /db_xref="CDD:411850"
     Site            order(172,174..176,178..182,185..186,189..190,195..198)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411850"
     Region          214..>269
                     /region_name="KH_10"
                     /note="GLD-3 KH domain 5; pfam17905"
                     /db_xref="CDD:407757"
     Region          752..815
                     /region_name="SAM_BICC1"
                     /note="SAM domain of BICC1 (bicaudal) subfamily; cd09520"
                     /db_xref="CDD:188919"
     CDS             1..853
                     /gene="BICC1"
                     /coded_by="XM_041475060.1:301..2862"
                     /db_xref="GeneID:121357594"
ORIGIN      
        1 msvldtksnr vtlkmdvsht ehshvigkgg nnikkvmeet gchihfpdsn rnnqaeksnq
       61 vsiagqpagv esarvrirel lplvlmfelp iagilqpipd pnsptiqhvc qtynisvsfk
      121 qrsrmygatv ivrgsqnnts avkegtamll ehlagslasa ipvstqldia aqhhlfmmgr
      181 ngsnikhimq rtgaqihfpd psnpqkkstv ylqgtiesvc larqylmgcl plvlmfdmke
      241 eievepqfit qlmeqldvfi sikpkpkqps ksvivksver nalnmyeark cllglessgv
      301 tvvsnpstvs cpvglscpgl dilssaglgl tglgllgpta lsvntsttpn sllnalnssv
      361 splqspssgt psptlwatsl antnttgfsa iphlmipsta qatltsills gvpnygqntp
      421 spppgltpve vhvngmqses kkgspslngh vkasnikyaa lsatslgenv lstshsdgvr
      481 qtsahgaseq vaakanseeg cndafvevgm prspshsant sdlkqmmsss kqacakrqtv
      541 ellqgtknsh lhtadrlrae aelgapespv adkkapgser aaeraaaaqq nserarlapq
      601 psfvnmqafd yeqkkllatk amlkkpvvte vrtptntwsg lgfsksmpae tikelrranh
      661 vsykpsmttt yegssmslsr sssrehlgsg sesdnwrdrn glgptahdfv ssigspkrkq
      721 nksaehylss snymdcissl tgsngcslns lfkgsdlpel fsklglgkyt difqqqeidl
      781 qtfltltdqd lkelgittfg arrkmllais elnknrrklf dpsnirasfl eggasgrlpr
      841 qyhsdiasvs grw
//
LOCUS       XP_041331015             879 aa            linear   VRT 06-MAY-2021
DEFINITION  lymphoid-specific helicase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331015
VERSION     XP_041331015.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475081.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="lymphoid-specific helicase isoform X1"
                     /calculated_mol_wt=101134
     Region          57..>843
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          244..477
                     /region_name="DEXHc_HELLS_SMARCA6"
                     /note="DEXH-box helicase domain of HELLS; cd18009"
                     /db_xref="CDD:350767"
     Site            order(274..280,313,378..379)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350767"
     CDS             1..879
                     /gene="HELLS"
                     /coded_by="XM_041475081.1:123..2762"
                     /db_xref="GeneID:121357610"
ORIGIN      
        1 mparnsgsgs gegrpgarpg aprvtvpnrp livaeplgae mgeqaeavvi tpamlkeeeq
       61 leaagleqer qmlekarssw dressemryk rlqhlleksn iyskflltkm eqqqleeqrr
      121 keklerkrem mlksakgqnp vdgkeeksga kkkrgredgt yniseimske eilsvakksk
      181 venqdessae nvhpedlqkn gdsnsvikdr lcqavrhsak hfldpvrkfn gqpvpfqqpk
      241 iftggvmrwy qvegmewlrm lwengingil ademglgkti qciatialmv ergvpgpflv
      301 cgplstlpnw msefkrftpe iplmlyhgtq qerrklvrki rgrqgslqiy pvvitsfeia
      361 mrdraalqnc ywkylivdeg hriknmncrl irelkrfnad nkllltgtpl qnnlaelwsl
      421 lnfllpdvfd dlksfeswfd itsitetaed iiakereqni lhmlhqiltp fllrrlksdv
      481 alevppkrev vvyaplskkq etfytaivnr tirklfgnne eevvelsstg rpkrrsrkvv
      541 dycedhngsp ddleklisrm qeevekerpv vevsipmdse vnlklqnimm llrkccnhpy
      601 lieypldpat qqfkvdedlv knsgkfllld rmlpelkkrg hkvllfsqmt mmldilmdyc
      661 ylrnfkfsrl dgsmsysqre enmhqfntdp evflflvstr agglginlta adtviiydsd
      721 wnpqsdlqaq drchrigqtk pvvvyrlvta ntidqtiver aaakrklekl iihknqfkgg
      781 ksglaqsksc ldpqellell ksrdyerevk gskekvisdk dlellldrsd lidqmkasek
      841 mkkekmgvfk vleessesna eycrcqlfns rgiwkvrlq
//
LOCUS       XP_041331026             864 aa            linear   VRT 06-MAY-2021
DEFINITION  lymphoid-specific helicase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331026
VERSION     XP_041331026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..864
                     /product="lymphoid-specific helicase isoform X2"
                     /calculated_mol_wt=99231
     Region          103..>843
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          244..477
                     /region_name="DEXHc_HELLS_SMARCA6"
                     /note="DEXH-box helicase domain of HELLS; cd18009"
                     /db_xref="CDD:350767"
     Site            order(274..280,313,378..379)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350767"
     CDS             1..864
                     /gene="HELLS"
                     /coded_by="XM_041475092.1:123..2717"
                     /db_xref="GeneID:121357610"
ORIGIN      
        1 mparnsgsgs gegrpgarpg aprvtvpnrp livaeplgae mgeqaeavvi tpamlkeeeq
       61 leaagleqer qmlekarssw dressemryk rlqhlleksn iyskflltkm eqqqleeqrr
      121 keklerkrem mlksakgqnp vdgkeeksga kkkrgredgt yniseimske eilsvakksk
      181 venqdessae nvhpedlqkn gdsnsvikdr lcqavrhsak hfldpvrkfn gqpvpfqqpk
      241 iftggvmrwy qvegmewlrm lwengingil ademglgkti qciatialmv ergvpgpflv
      301 cgplstlpnw msefkrftpe iplmlyhgtq qerrklvrki rgrqgslqiy pvvitsfeia
      361 mrdraalqnc ywkylivdeg hriknmncrl irelkrfnad nkllltgtpl qnnlaelwsl
      421 lnfllpdvfd dlksfeswfd itsitetaed iiakereqni lhmlhqiltp fllrrlksdv
      481 alevppkrev vvyaplskkq etfytaivnr tirklfgnne eevvelsstg rpkrrsrkvv
      541 dycedhngsp ddleklisrm qeevekerpv vevsipmdse vnlklqnimm llrkccnhpy
      601 lieypldpat qqfkvdedlv knsgkfllld rmlpelkkrg hkvllfsqmt mmldilmdyc
      661 ylrnfkfsrl dgsmsysqre enmhqfntdp evflflvstr agglginlta adtviiydsd
      721 wnpqsdlqaq drchrigqtk pvvvyrlvta ntidqtiver aaakrklekl iihknqfkgg
      781 ksglaqsksc ldpqellell ksrdyerevk gskekvisdk dlellldrsd lidqmkasek
      841 mkkekmgvfk vleessesna ecvf
//
LOCUS       XP_041331037             855 aa            linear   VRT 06-MAY-2021
DEFINITION  lymphoid-specific helicase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041331037
VERSION     XP_041331037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..855
                     /product="lymphoid-specific helicase isoform X3"
                     /calculated_mol_wt=98714
     Region          79..>819
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          220..453
                     /region_name="DEXHc_HELLS_SMARCA6"
                     /note="DEXH-box helicase domain of HELLS; cd18009"
                     /db_xref="CDD:350767"
     Site            order(250..256,289,354..355)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350767"
     CDS             1..855
                     /gene="HELLS"
                     /coded_by="XM_041475103.1:123..2690"
                     /db_xref="GeneID:121357610"
ORIGIN      
        1 mparnsgsgs eplgaemgeq aeavvitpam lkeeeqleaa gleqerqmle karsswdres
       61 semrykrlqh lleksniysk flltkmeqqq leeqrrkekl erkremmlks akgqnpvdgk
      121 eeksgakkkr gredgtynis eimskeeils vakkskvenq dessaenvhp edlqkngdsn
      181 svikdrlcqa vrhsakhfld pvrkfngqpv pfqqpkiftg gvmrwyqveg mewlrmlwen
      241 gingiladem glgktiqcia tialmvergv pgpflvcgpl stlpnwmsef krftpeiplm
      301 lyhgtqqerr klvrkirgrq gslqiypvvi tsfeiamrdr aalqncywky livdeghrik
      361 nmncrlirel krfnadnkll ltgtplqnnl aelwsllnfl lpdvfddlks feswfditsi
      421 tetaediiak ereqnilhml hqiltpfllr rlksdvalev ppkrevvvya plskkqetfy
      481 taivnrtirk lfgnneeevv elsstgrpkr rsrkvvdyce dhngspddle klisrmqeev
      541 ekerpvvevs ipmdsevnlk lqnimmllrk ccnhpyliey pldpatqqfk vdedlvknsg
      601 kfllldrmlp elkkrghkvl lfsqmtmmld ilmdycylrn fkfsrldgsm sysqreenmh
      661 qfntdpevfl flvstraggl ginltaadtv iiydsdwnpq sdlqaqdrch rigqtkpvvv
      721 yrlvtantid qtiveraaak rklekliihk nqfkggksgl aqskscldpq ellellksrd
      781 yerevkgske kvisdkdlel lldrsdlidq mkasekmkke kmgvfkvlee ssesnaeycr
      841 cqlfnsrgiw kvrlq
//
LOCUS       XP_041331045             840 aa            linear   VRT 06-MAY-2021
DEFINITION  lymphoid-specific helicase isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041331045
VERSION     XP_041331045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..840
                     /product="lymphoid-specific helicase isoform X4"
                     /calculated_mol_wt=96811
     Region          79..>819
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Region          220..453
                     /region_name="DEXHc_HELLS_SMARCA6"
                     /note="DEXH-box helicase domain of HELLS; cd18009"
                     /db_xref="CDD:350767"
     Site            order(250..256,289,354..355)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350767"
     CDS             1..840
                     /gene="HELLS"
                     /coded_by="XM_041475111.1:123..2645"
                     /db_xref="GeneID:121357610"
ORIGIN      
        1 mparnsgsgs eplgaemgeq aeavvitpam lkeeeqleaa gleqerqmle karsswdres
       61 semrykrlqh lleksniysk flltkmeqqq leeqrrkekl erkremmlks akgqnpvdgk
      121 eeksgakkkr gredgtynis eimskeeils vakkskvenq dessaenvhp edlqkngdsn
      181 svikdrlcqa vrhsakhfld pvrkfngqpv pfqqpkiftg gvmrwyqveg mewlrmlwen
      241 gingiladem glgktiqcia tialmvergv pgpflvcgpl stlpnwmsef krftpeiplm
      301 lyhgtqqerr klvrkirgrq gslqiypvvi tsfeiamrdr aalqncywky livdeghrik
      361 nmncrlirel krfnadnkll ltgtplqnnl aelwsllnfl lpdvfddlks feswfditsi
      421 tetaediiak ereqnilhml hqiltpfllr rlksdvalev ppkrevvvya plskkqetfy
      481 taivnrtirk lfgnneeevv elsstgrpkr rsrkvvdyce dhngspddle klisrmqeev
      541 ekerpvvevs ipmdsevnlk lqnimmllrk ccnhpyliey pldpatqqfk vdedlvknsg
      601 kfllldrmlp elkkrghkvl lfsqmtmmld ilmdycylrn fkfsrldgsm sysqreenmh
      661 qfntdpevfl flvstraggl ginltaadtv iiydsdwnpq sdlqaqdrch rigqtkpvvv
      721 yrlvtantid qtiveraaak rklekliihk nqfkggksgl aqskscldpq ellellksrd
      781 yerevkgske kvisdkdlel lldrsdlidq mkasekmkke kmgvfkvlee ssesnaecvf
//
LOCUS       XP_041331058             365 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 26 [Pyrgilauda ruficollis].
ACCESSION   XP_041331058
VERSION     XP_041331058.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475124.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..365
                     /product="transmembrane protein 26"
                     /calculated_mol_wt=41316
     Region          3..303
                     /region_name="Tmem26"
                     /note="Transmembrane protein 26; pfam09772"
                     /db_xref="CDD:430813"
     CDS             1..365
                     /gene="TMEM26"
                     /coded_by="XM_041475124.1:141..1238"
                     /db_xref="GeneID:121357624"
ORIGIN      
        1 melmvllnal vtrllfvlhs ligvwrvtav kkepkywlla llnlllclet gltlkfkqgr
       61 gykwfspaif lylicivpsl wlleihhgtq ycgnepgavq vnvsnqdfnq sresshgseg
      121 tdhhiiqtak vfvnqlstic etvwtlalhq tfllllvvgr wllpigveit rdqlsqlllm
      181 fvgtaadile fasetldied vrknyalina ilavwtwsml qfpldlavqh igckpsasar
      241 ripslllcry saelwnigvs lfiqdgpffi vrsilmghfr ifnqmlvfft aknilvvtlq
      301 lyrlavitld frttvlqksr kgevcccpce pyearahatg rqenemkecv afppkeesqa
      361 psedh
//
LOCUS       XP_041331071             496 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2C19-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331071
VERSION     XP_041331071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="cytochrome P450 2C19-like isoform X1"
                     /calculated_mol_wt=55781
     Region          67..491
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(126,130,137,184,299..300,303..304,307..308,311,362,
                     372,374,397,433..435,439..443,446..447)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410758"
     Site            order(210..211,299,302..303,307,370..373)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410758"
     CDS             1..496
                     /gene="LOC121357631"
                     /coded_by="XM_041475137.1:184..1674"
                     /db_xref="GeneID:121357631"
ORIGIN      
        1 mkmellggat vvllvciacl lsfaawkgrs gkgkmppgpa plpilgnllq vkpsnlaktl
       61 qklseaygpv ftvhmgsdpv vvlhgydvvk ealidradef asrghmpige rtnnglgiif
      121 snnepwlqvr rfslttlrnf gmgkrsieer iqeesdylle eihktkgtaf dptfmlscsv
      181 snvicsiifg rrydykdkkf lalmdnmnni femmnsrwgq lyqmfsnimd ylpgphnnif
      241 aefdalkafv aeevklhqas ldpnspqdfi dcflskmqee kdhpnssfhm knlvtsafdl
      301 fiagtettst tvryglllli kypkiqekiq eeidqvvgrs rkpcvadrtq mpytdavvhe
      361 iqrfitlvpl alphtvtkdt sfrdyvipkg ttiypvlasv lydskefpnp hefnpehfln
      421 kdgsfrksny fmpfsagkri cpgeglarme iflliatilq nftlksvvnp qelsitpils
      481 gignvppdfq lcafpr
//
LOCUS       XP_041331080             485 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2C19-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331080
VERSION     XP_041331080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="cytochrome P450 2C19-like isoform X2"
                     /calculated_mol_wt=54779
     Region          56..480
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(115,119,126,173,288..289,292..293,296..297,300,351,
                     361,363,386,422..424,428..432,435..436)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410758"
     Site            order(199..200,288,291..292,296,359..362)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410758"
     CDS             1..485
                     /gene="LOC121357631"
                     /coded_by="XM_041475146.1:116..1573"
                     /db_xref="GeneID:121357631"
ORIGIN      
        1 msvmgkrelc rqgawkgrsg kgkmppgpap lpilgnllqv kpsnlaktlq klseaygpvf
       61 tvhmgsdpvv vlhgydvvke alidradefa srghmpiger tnnglgiifs nnepwlqvrr
      121 fslttlrnfg mgkrsieeri qeesdyllee ihktkgtafd ptfmlscsvs nvicsiifgr
      181 rydykdkkfl almdnmnnif emmnsrwgql yqmfsnimdy lpgphnnifa efdalkafva
      241 eevklhqasl dpnspqdfid cflskmqeek dhpnssfhmk nlvtsafdlf iagtettstt
      301 vrygllllik ypkiqekiqe eidqvvgrsr kpcvadrtqm pytdavvhei qrfitlvpla
      361 lphtvtkdts frdyvipkgt tiypvlasvl ydskefpnph efnpehflnk dgsfrksnyf
      421 mpfsagkric pgeglarmei flliatilqn ftlksvvnpq elsitpilsg ignvppdfql
      481 cafpr
//
LOCUS       XP_041331089             462 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2C8-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041331089
VERSION     XP_041331089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..462
                     /product="cytochrome P450 2C8-like isoform X3"
                     /calculated_mol_wt=52246
     Region          33..457
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(92,96,103,150,265..266,269..270,273..274,277,328,
                     338,340,363,399..401,405..409,412..413)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410758"
     Site            order(176..177,265,268..269,273,336..339)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410758"
     CDS             1..462
                     /gene="LOC121357631"
                     /coded_by="XM_041475155.1:77..1465"
                     /db_xref="GeneID:121357631"
ORIGIN      
        1 mppgpaplpi lgnllqvkps nlaktlqkls eaygpvftvh mgsdpvvvlh gydvvkeali
       61 dradefasrg hmpigertnn glgiifsnne pwlqvrrfsl ttlrnfgmgk rsieeriqee
      121 sdylleeihk tkgtafdptf mlscsvsnvi csiifgrryd ykdkkflalm dnmnnifemm
      181 nsrwgqlyqm fsnimdylpg phnnifaefd alkafvaeev klhqasldpn spqdfidcfl
      241 skmqeekdhp nssfhmknlv tsafdlfiag tettsttvry gllllikypk iqekiqeeid
      301 qvvgrsrkpc vadrtqmpyt davvheiqrf itlvplalph tvtkdtsfrd yvipkgttiy
      361 pvlasvlyds kefpnphefn pehflnkdgs frksnyfmpf sagkricpge glarmeifll
      421 iatilqnftl ksvvnpqels itpilsgign vppdfqlcaf pr
//
LOCUS       XP_041331101             129 aa            linear   VRT 06-MAY-2021
DEFINITION  ciliary-associated calcium-binding coiled-coil protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331101
VERSION     XP_041331101.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475167.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="ciliary-associated calcium-binding coiled-coil
                     protein 1"
                     /calculated_mol_wt=14608
     Region          1..90
                     /region_name="CLAMP"
                     /note="Flagellar C1a complex subunit C1a-32; pfam14769"
                     /db_xref="CDD:464306"
     CDS             1..129
                     /gene="CABCOCO1"
                     /coded_by="XM_041475167.1:218..607"
                     /db_xref="GeneID:121357648"
ORIGIN      
        1 mnfsliqlsr fldllnfsle nvsskrmtlg enlkeleram tgigetesee ggylnlfsie
       61 qskaiidflv vslfkhykay eylfhgrree rvisneneie ldqpavspsa saidsqadln
      121 eklqmqeea
//
LOCUS       XP_041331113             951 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(ADP-ribose) glycohydrolase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331113
VERSION     XP_041331113.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475179.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..951
                     /product="poly(ADP-ribose) glycohydrolase isoform X1"
                     /calculated_mol_wt=106769
     Region          550..878
                     /region_name="PARG_cat"
                     /note="Poly (ADP-ribose) glycohydrolase (PARG); pfam05028"
                     /db_xref="CDD:461528"
     CDS             1..951
                     /gene="PARG"
                     /coded_by="XM_041475179.1:147..3002"
                     /db_xref="GeneID:121357657"
ORIGIN      
        1 msagcgrepp rkkarpgpgs pgggsqgerq egpgrssstt avgnkvckqr titswlekkg
       61 pktteskslh skinnnteah pkmtsikken fcehdvkkle ntcqqnnaki svevgakqvn
      121 lpqtgsmcnw eaeekdavld tdpvkglqsa dlfknanidq mhktgkqrgc eessatwtqr
      181 klsagraskt gnskpskdie tdgqvascns qklkscnsvc lmseqeegdv vpesplsdag
      241 cdacisdlgg pgklskcqss sgdspafeke sepespmdvd nsknschgse adeetspfld
      301 ereeihmskp inkcfriqyg daelesrksr fsakgcgsfe evdnsvkedt qhtkapgisp
      361 apsseckgak qgvkrdskit shfmripkve ekrkekcefk pqrpgrkvak ytppplptnk
      421 kwfgtpieem rrmpacgarl phlrpsasht vtirvdllre gevpkpfpth ykdlwdnkhv
      481 kmpcseqnly pvedengdrt agsrweliqt allnkftcsh dlkeailryn vayskkwdft
      541 altdfcekvl edaeaqhlfq silpdmvkla lclpnictqp ipllkqkmnh sitmsqeqia
      601 sflanaffct fprrnakmks eyssypdinf nrlfegrspr kpeklktlfc yfrrvtekkp
      661 tglvtftrqc lqefpdwers qkklsrlhvs segtiesngq gmlqvdfanr fvgggvtgag
      721 lvqeeirfli npelivsrli tevldhnecl iitgteqyse ytgyaetyrw arshedktpr
      781 dewqrrhtei vaidafhfrr fldqfgpeki rrelnkaycg fsrpnvapqh lsaiatgnwg
      841 cgafggdsrl kaliqilaaa eagrdivyft fgdvelmrdi ysmhtflcek gqsigdiyrl
      901 llryyneqcr ncstsgpdvk lysfiyntle syahstddde edeekglcfe d
//
LOCUS       XP_041331125             952 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(ADP-ribose) glycohydrolase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331125
VERSION     XP_041331125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475191.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..952
                     /product="poly(ADP-ribose) glycohydrolase isoform X2"
                     /calculated_mol_wt=106856
     Region          551..879
                     /region_name="PARG_cat"
                     /note="Poly (ADP-ribose) glycohydrolase (PARG); pfam05028"
                     /db_xref="CDD:461528"
     CDS             1..952
                     /gene="PARG"
                     /coded_by="XM_041475191.1:217..3075"
                     /db_xref="GeneID:121357657"
ORIGIN      
        1 msagcgrepp rkkarpgpgs pgggsqgerq egpgrssstt avgnkvckqr titswlekkg
       61 pktteskslh skinnnteah pkmtsikken fcehdvkkle ntcqqnnaki svevgakqvn
      121 lpqtgsmcnw eaeekdavld tdpvkglqsa dlfknanidq mhktgkqrgc eessatwtqr
      181 klsagraskt gnskpskdie tdgqvascns qklkscnsvc lmseqeegdv vpesplsdag
      241 cdacisdlgg pgklskcqss sgdspafeke sepespmdvd nsknschgse adeetspfld
      301 ereeihmskp inkcfriqyg daelesrksr fsakgcgsfe evdnsvkedt qhtkapgisp
      361 apsseckgak qgvkrdskit shfmripkve eksrkekcef kpqrpgrkva kytppplptn
      421 kkwfgtpiee mrrmpacgar lphlrpsash tvtirvdllr egevpkpfpt hykdlwdnkh
      481 vkmpcseqnl ypvedengdr tagsrweliq tallnkftcs hdlkeailry nvayskkwdf
      541 taltdfcekv ledaeaqhlf qsilpdmvkl alclpnictq pipllkqkmn hsitmsqeqi
      601 asflanaffc tfprrnakmk seyssypdin fnrlfegrsp rkpeklktlf cyfrrvtekk
      661 ptglvtftrq clqefpdwer sqkklsrlhv ssegtiesng qgmlqvdfan rfvgggvtga
      721 glvqeeirfl inpelivsrl itevldhnec liitgteqys eytgyaetyr warshedktp
      781 rdewqrrhte ivaidafhfr rfldqfgpek irrelnkayc gfsrpnvapq hlsaiatgnw
      841 gcgafggdsr lkaliqilaa aeagrdivyf tfgdvelmrd iysmhtflce kgqsigdiyr
      901 lllryyneqc rncstsgpdv klysfiyntl esyahstddd eedeekglcf ed
//
LOCUS       XP_041331133             870 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(ADP-ribose) glycohydrolase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041331133
VERSION     XP_041331133.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475199.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..870
                     /product="poly(ADP-ribose) glycohydrolase isoform X3"
                     /calculated_mol_wt=98248
     Region          469..797
                     /region_name="PARG_cat"
                     /note="Poly (ADP-ribose) glycohydrolase (PARG); pfam05028"
                     /db_xref="CDD:461528"
     CDS             1..870
                     /gene="PARG"
                     /coded_by="XM_041475199.1:265..2877"
                     /db_xref="GeneID:121357657"
ORIGIN      
        1 mtsikkenfc ehdvkklent cqqnnakisv evgakqvnlp qtgsmcnwea eekdavldtd
       61 pvkglqsadl fknanidqmh ktgkqrgcee ssatwtqrkl sagrasktgn skpskdietd
      121 gqvascnsqk lkscnsvclm seqeegdvvp esplsdagcd acisdlggpg klskcqsssg
      181 dspafekese pespmdvdns knschgsead eetspflder eeihmskpin kcfriqygda
      241 elesrksrfs akgcgsfeev dnsvkedtqh tkapgispap sseckgakqg vkrdskitsh
      301 fmripkveek srkekcefkp qrpgrkvaky tppplptnkk wfgtpieemr rmpacgarlp
      361 hlrpsashtv tirvdllreg evpkpfpthy kdlwdnkhvk mpcseqnlyp vedengdrta
      421 gsrweliqta llnkftcshd lkeailrynv ayskkwdfta ltdfcekvle daeaqhlfqs
      481 ilpdmvklal clpnictqpi pllkqkmnhs itmsqeqias flanaffctf prrnakmkse
      541 yssypdinfn rlfegrsprk peklktlfcy frrvtekkpt glvtftrqcl qefpdwersq
      601 kklsrlhvss egtiesngqg mlqvdfanrf vgggvtgagl vqeeirflin pelivsrlit
      661 evldhnecli itgteqysey tgyaetyrwa rshedktprd ewqrrhteiv aidafhfrrf
      721 ldqfgpekir relnkaycgf srpnvapqhl saiatgnwgc gafggdsrlk aliqilaaae
      781 agrdivyftf gdvelmrdiy smhtflcekg qsigdiyrll lryyneqcrn cstsgpdvkl
      841 ysfiyntles yahstdddee deekglcfed
//
LOCUS       XP_041331145             206 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import inner membrane translocase subunit Tim23
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331145
VERSION     XP_041331145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475211.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim23"
                     /calculated_mol_wt=21410
     Region          43..188
                     /region_name="3a0801s02tim23"
                     /note="mitochondrial import inner membrane translocase
                     subunit tim23; TIGR00983"
                     /db_xref="CDD:130056"
     CDS             1..206
                     /gene="LOC121357681"
                     /coded_by="XM_041475211.1:57..677"
                     /db_xref="GeneID:121357681"
ORIGIN      
        1 megggnskgt glgglfgagg lgyshadlag vpltgmspls pylnldpkyl vqdtdefilp
       61 tganktrgrf elafftiggc cmtgaafgal nglrlglket qnmawskprn vqilnmvtrq
      121 galwantlgs lallysafgv viektrgaed dlntiaagtl tgmlykstgg vrgiarggia
      181 gltltglyal ynnwehmkgs larqsl
//
LOCUS       XP_041331154             364 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate multikinase [Pyrgilauda ruficollis].
ACCESSION   XP_041331154
VERSION     XP_041331154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..364
                     /product="inositol polyphosphate multikinase"
                     /calculated_mol_wt=41292
     Region          71..359
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..364
                     /gene="IPMK"
                     /coded_by="XM_041475220.1:124..1218"
                     /db_xref="GeneID:121357693"
ORIGIN      
        1 mygkdkggil qhpdgtvlkq lqppprgpre qefynkvyds dccdsillql reylpkyfgv
       61 wspptapndt ylkledvtrk fnkpcimdvk igqksydpya saekiqqqvs kyplmeeigf
      121 lvlgmrvyhv ssdsyetqnq hygrsltket vkdgiskffh sgyclrkdvv aasiqkveki
      181 lewfegqtql nfyassllfv yegscqattv rlsdvtlaek rrvpkgllag gdvleynnni
      241 hvinstengk ieasvgkgls kfyalhkkac skrhhsqlsl kvenseqdnv wktstcitqe
      301 hlngnvlpql ekvfyhmpae pkesanvevr midfahvfps ntkdegyiyg lknlitvlqn
      361 ildn
//
LOCUS       XP_041331166             251 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121357700 [Pyrgilauda ruficollis].
ACCESSION   XP_041331166
VERSION     XP_041331166.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475232.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..251
                     /product="uncharacterized protein LOC121357700"
                     /calculated_mol_wt=27799
     CDS             1..251
                     /gene="LOC121357700"
                     /coded_by="XM_041475232.1:78..833"
                     /db_xref="GeneID:121357700"
ORIGIN      
        1 mlelpfllqp vkckanneti plpfpqitvc lqeprsaavl fpvllpqerg waekrlalpw
       61 alsaltksph hgavdsqkdr hraqrhttpg aepswkrpcs piscartkrf pqsapskstp
      121 fftphsksst ncfaltklfa ltesghnlen iwqkqsslrk llaekalaay nfkcahrftr
      181 shpaistfll ssryhsmpsv sqsqdpnrma pgtahilkvp gqkaqqkhlg lmahfsssrg
      241 qspglswegf p
//
LOCUS       XP_041331178             175 aa            linear   VRT 06-MAY-2021
DEFINITION  CDGSH iron-sulfur domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331178
VERSION     XP_041331178.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475244.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..175
                     /product="CDGSH iron-sulfur domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=19005
     Region          122..160
                     /region_name="ZnF_CDGSH"
                     /note="CDGSH-type zinc finger. Function unknown;
                     smart00704"
                     /db_xref="CDD:197836"
     CDS             1..175
                     /gene="CISD1"
                     /coded_by="XM_041475244.1:16..543"
                     /db_xref="GeneID:121357707"
ORIGIN      
        1 mrsrrrargs pgsvvrgrgg aarvrksrrg pqglrarvgn secqclvntg vkvtggtwrg
       61 eeeesdrvkl qncvqgkgew iaavsvaaga avvgylayrk lfckgtcska vvnphiqkdn
      121 pkvvhafdme dlgdkavycr cwrskkfplc dgshtkhnee tgdnvgplii krkea
//
LOCUS       XP_041331186             175 aa            linear   VRT 06-MAY-2021
DEFINITION  CDGSH iron-sulfur domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331186
VERSION     XP_041331186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..175
                     /product="CDGSH iron-sulfur domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=19005
     Region          122..160
                     /region_name="ZnF_CDGSH"
                     /note="CDGSH-type zinc finger. Function unknown;
                     smart00704"
                     /db_xref="CDD:197836"
     CDS             1..175
                     /gene="CISD1"
                     /coded_by="XM_041475252.1:16..543"
                     /db_xref="GeneID:121357707"
ORIGIN      
        1 mrsrrrargs pgsvvrgrgg aarvrksrrg pqglrarvgn secqclvntg vkvtggtwrg
       61 eeeesdrvkl qncvqgkgew iaavsvaaga avvgylayrk lfckgtcska vvnphiqkdn
      121 pkvvhafdme dlgdkavycr cwrskkfplc dgshtkhnee tgdnvgplii krkea
//
LOCUS       XP_041331193             175 aa            linear   VRT 06-MAY-2021
DEFINITION  CDGSH iron-sulfur domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331193
VERSION     XP_041331193.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475259.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..175
                     /product="CDGSH iron-sulfur domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=19005
     Region          122..160
                     /region_name="ZnF_CDGSH"
                     /note="CDGSH-type zinc finger. Function unknown;
                     smart00704"
                     /db_xref="CDD:197836"
     CDS             1..175
                     /gene="CISD1"
                     /coded_by="XM_041475259.1:16..543"
                     /db_xref="GeneID:121357707"
ORIGIN      
        1 mrsrrrargs pgsvvrgrgg aarvrksrrg pqglrarvgn secqclvntg vkvtggtwrg
       61 eeeesdrvkl qncvqgkgew iaavsvaaga avvgylayrk lfckgtcska vvnphiqkdn
      121 pkvvhafdme dlgdkavycr cwrskkfplc dgshtkhnee tgdnvgplii krkea
//
LOCUS       XP_041331199             108 aa            linear   VRT 06-MAY-2021
DEFINITION  CDGSH iron-sulfur domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331199
VERSION     XP_041331199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475265.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..108
                     /product="CDGSH iron-sulfur domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=11643
     Region          55..93
                     /region_name="ZnF_CDGSH"
                     /note="CDGSH-type zinc finger. Function unknown;
                     smart00704"
                     /db_xref="CDD:197836"
     CDS             1..108
                     /gene="CISD1"
                     /coded_by="XM_041475265.1:16..342"
                     /db_xref="GeneID:121357707"
ORIGIN      
        1 mgpgqncavr gewiaavsva agaavvgyla yrklfckgtc skavvnphiq kdnpkvvhaf
       61 dmedlgdkav ycrcwrskkf plcdgshtkh neetgdnvgp liikrkea
//
LOCUS       XP_041331210             147 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 D1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331210
VERSION     XP_041331210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="ubiquitin-conjugating enzyme E2 D1"
                     /calculated_mol_wt=16471
     Region          3..145
                     /region_name="UBCc_UBE2D"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 D1-D3 and
                     related proteins; cd23792"
                     /db_xref="CDD:467412"
     CDS             1..147
                     /gene="UBE2D1"
                     /coded_by="XM_041475276.1:107..550"
                     /db_xref="GeneID:121357728"
ORIGIN      
        1 malkriqkel sdlqrdppah csagpvgddl fhwqatimgp pdsayqggvf fltvhfptdy
       61 pfkppkiaft tkiyhpnins ngsicldilr sqwspaltvs kvllsicsll cdpnpddplv
      121 pdiaqiyksd kekynrhare wtqkyam
//
LOCUS       XP_041331231             593 aa            linear   VRT 06-MAY-2021
DEFINITION  G protein-regulated inducer of neurite outgrowth 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331231
VERSION     XP_041331231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..593
                     /product="G protein-regulated inducer of neurite outgrowth
                     2"
                     /calculated_mol_wt=63909
     Region          475..590
                     /region_name="GRIN_C"
                     /note="G protein-regulated inducer of neurite outgrowth
                     C-terminus; pfam15235"
                     /db_xref="CDD:464577"
     CDS             1..593
                     /gene="GPRIN2"
                     /coded_by="XM_041475297.1:1..1782"
                     /db_xref="GeneID:121357740"
ORIGIN      
        1 mssdshqlht hcyqdslsst chsllnvnsh plsksssnla cigsleerqn kqelkkshss
       61 tichilenrs darsvqspgw sssqpgmvgi gsevptindr sandhseart kntnhvlvte
      121 qssaswgvgd tkmcvkssta esvssacfvh qqgmckmees gtalqrshsd ltcsckqqth
      181 vthietsatq sslsssgcrh gppvarmsfq tqrygsetnq ntshcqnlvt hlpvlprdqq
      241 vptntfdsgs iprnttvytd pgtfhtavlg phmpgnsfpn rtmfsqapgi ihggltygni
      301 pnsayspmvm tvhnnsagpc slrqdalkad atipaychsl pipsiqlipr lvcsvsetgk
      361 eqaapgyfhs fsasdiltyp klvssvsesg ldakkilkcc nvpgeqlqpa pqerappeae
      421 aacvalssqq gadmvvttkd mwtmtsmndi tkglkpaler rdaevqtlpt vecksvatsp
      481 aaaaeghshv fpevnleqgl eapkspvrev rwddegmtwe vygasvdpev lgvaiqkhle
      541 fqieqfqtep aeaagksnee pppgktgkkr pfrtmmhslr ypsccarsst ave
//
LOCUS       XP_041331245             294 aa            linear   VRT 06-MAY-2021
DEFINITION  myozenin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331245
VERSION     XP_041331245.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475311.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="myozenin-1 isoform X1"
                     /calculated_mol_wt=31937
     Region          1..294
                     /region_name="Calsarcin"
                     /note="Calcineurin-binding protein (Calsarcin); pfam05556"
                     /db_xref="CDD:461676"
     CDS             1..294
                     /gene="MYOZ1"
                     /coded_by="XM_041475311.1:222..1106"
                     /db_xref="GeneID:121357743"
ORIGIN      
        1 mplagtpapv krkkstklig kltheampqe vsklnlgkki siprdvmlee lslltnkgsk
       61 mfklrqlrve kfiyennpda ftdnsvdhfq kfippggsyg edghgyahgr mvggmaagqh
      121 gssmqqqpgv pprpgsrgga gdgegehagk ssgsggeggn gtdkdgksgg kkvtifktyi
      181 spweramgis pedksqfstd llsyspkadf phyksfnrta mpyggfekaa krmtfkvpqf
      241 dicpllpesl miynqnfskr psfnrtpipw mpsgdfseyq tavnvpvsge teel
//
LOCUS       XP_041331255             268 aa            linear   VRT 06-MAY-2021
DEFINITION  myozenin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331255
VERSION     XP_041331255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475321.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..268
                     /product="myozenin-1 isoform X2"
                     /calculated_mol_wt=29182
     Region          1..268
                     /region_name="Calsarcin"
                     /note="Calcineurin-binding protein (Calsarcin); pfam05556"
                     /db_xref="CDD:461676"
     CDS             1..268
                     /gene="MYOZ1"
                     /coded_by="XM_041475321.1:197..1003"
                     /db_xref="GeneID:121357743"
ORIGIN      
        1 mpqevsklnl gkkisiprdv mleelslltn kgskmfklrq lrvekfiyen npdaftdnsv
       61 dhfqkfippg gsygedghgy ahgrmvggma agqhgssmqq qpgvpprpgs rggagdgege
      121 hagkssgsgg eggngtdkdg ksggkkvtif ktyispwera mgispedksq fstdllsysp
      181 kadfphyksf nrtampyggf ekaakrmtfk vpqfdicpll peslmiynqn fskrpsfnrt
      241 pipwmpsgdf seyqtavnvp vsgeteel
//
LOCUS       XP_041331268             189 aa            linear   VRT 06-MAY-2021
DEFINITION  pulmonary surfactant-associated protein D [Pyrgilauda ruficollis].
ACCESSION   XP_041331268
VERSION     XP_041331268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..189
                     /product="pulmonary surfactant-associated protein D"
                     /calculated_mol_wt=20649
     Region          77..189
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(163,167,169,173,175..178,181..183)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153061"
     CDS             1..189
                     /gene="SFTPD"
                     /coded_by="XM_041475334.1:1..570"
                     /db_xref="GeneID:121357751"
ORIGIN      
        1 mlpyssyili alaallvtcq aaskcpgisg lpgrnglkgl pdslaskrhd alanlkhrlf
       61 qleavlslng kirkvgekil asngkkadfa salqsceevg gtlaapknee enkavmdivk
      121 ehnqyaylgi rkgeisgqvk yingmplsys nwhqrepngd gkekcvemyt dgtwndkkcn
      181 myrlticef
//
LOCUS       XP_041331281             298 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor-binding factor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331281
VERSION     XP_041331281.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475347.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="nuclear receptor-binding factor 2"
                     /calculated_mol_wt=33351
     Region          12..94
                     /region_name="NRBF2_MIT"
                     /note="MIT domain of nuclear receptor-binding factor 2;
                     pfam17169"
                     /db_xref="CDD:465368"
     Region          97..295
                     /region_name="NRBF2"
                     /note="Nuclear receptor-binding factor 2, autophagy
                     regulator; pfam08961"
                     /db_xref="CDD:430345"
     CDS             1..298
                     /gene="NRBF2"
                     /coded_by="XM_041475347.1:100..996"
                     /db_xref="GeneID:121357756"
ORIGIN      
        1 mcpqpppsme vmegplnlah qqsrkadrll aagkyeeais chkkaagylt damkltqseq
       61 aqlslelqrd shmkqllliq erwkrakree klkaqqsadk eaaahlqtsy rpsaedsddq
      121 nilvpvaqky ssstekhsqd irgvfdrdpd tllfllqkkk epveacigsk apkddktiie
      181 eqatkiadlk qlieslvaen erlrrenkql kaerarlqks pvdkeldvdt dfvekselwg
      241 lqqhsesass aatwqkfatt agkakdipip nlppldipsp elpllelsdd ilkglmns
//
LOCUS       XP_041331292             208 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity protein phosphatase 13-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331292
VERSION     XP_041331292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="dual specificity protein phosphatase 13-like
                     isoform X1"
                     /calculated_mol_wt=22896
     Region          35..197
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..208
                     /gene="LOC121357766"
                     /coded_by="XM_041475358.1:624..1250"
                     /db_xref="GeneID:121357766"
ORIGIN      
        1 mawdslcsrd lrrprirsas swmpdsgsst gtpsleelrr llctrthptg hvdevwpnly
       61 vgdlyvardk aqlsrmgish ivnaaagrfr intgpkfysd lpvdyygvea ednpnfdlsi
      121 hfypvaqyir ealnsprgkv lvhcamgisr saalvlaflm icegmslata iqtvrshrgv
      181 cpnsgflqql rdldlrlgrg tgrgaeac
//
LOCUS       XP_041331302             174 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity protein phosphatase 13-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331302
VERSION     XP_041331302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475368.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="dual specificity protein phosphatase 13-like
                     isoform X2"
                     /calculated_mol_wt=19500
     Region          35..>139
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     CDS             1..174
                     /gene="LOC121357766"
                     /coded_by="XM_041475368.1:645..1169"
                     /db_xref="GeneID:121357766"
ORIGIN      
        1 mawdslcsrd lrrprirsas swmpdsgsst gtpsleelrr llctrthptg hvdevwpnly
       61 vgdlyvardk aqlsrmgish ivnaaagrfr intgpkfysd lpvdyygvea ednpnfdlsi
      121 hfypvaqyir ealnsprekp gqqsapsesi tvlskkkeef venqecccns seqs
//
LOCUS       XP_041331314             895 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-tubulin complex component 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331314
VERSION     XP_041331314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..895
                     /product="gamma-tubulin complex component 2"
                     /calculated_mol_wt=102846
     Region          218..506
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          509..868
                     /region_name="GCP_C_terminal"
                     /note="Gamma tubulin complex component C-terminal;
                     pfam04130"
                     /db_xref="CDD:461187"
     CDS             1..895
                     /gene="TUBGCP2"
                     /coded_by="XM_041475380.1:218..2905"
                     /db_xref="GeneID:121357777"
ORIGIN      
        1 msefrihhdv nellsllrvh ggegaevyie llqknrtpyv ttnvsahsak vkiaefsrtp
       61 edflkkydel kskntrhlds lvyllsklte dketlhylqq nakeraelaa ntatssstnf
      121 sipsstskms lqeleelrkq lgtvtanssa qqpleltrki lrdkqnkkns gqpipvfpsw
      181 vyerpaligd fligtslstd ttvpigtlpl asqesmived llyvligvdg ryitaqalvg
      241 rqnrafsldp nldlsikelv trilpvaasy savtrfieek ssfeygqvnh alaaamrtli
      301 keymilitql ehlqrqglls lqklwfyiqp tmrtleilas latsvdkgec mggstlsllh
      361 dktfnytgds qaqelclylt kaasvpyfei lekwiyrgii ndpysefmve ehelqkekiq
      421 edyndkywdq rytvvqqqip sflqkmadki lstgkylnvv recgrdvtcp vakeviytlk
      481 erayveqiek aynyaskvll dflmeekelv ahlrsikhyf lmdqgdffvh fmdlteeelk
      541 kpvddiittr leallelalr mstantdpfk ddlkidlmph dlitqllrvl aietkqekai
      601 isaepteltl sgleafsfdy ivkwplslii nrkaltryqm lfrhmfyckh verqlcnvwi
      661 snktakqfsl hsakwfagaf tlrqrmlnfv qniqyymmfe vmeptwhile knlklacnid
      721 dvlshhtsfl dnclkdcmlt npellkifsk lmsvcvmftn cmqrftqsmk ldsemerltl
      781 ehgtmlgppt eeeraeeaak kkltnkllae hadslhltsg featinkfds nfsthlldll
      841 dklsvystnd cehsmlniiy rldfngfyte rlehmsaers qkappllprl avpaq
//
LOCUS       XP_041331328             586 aa            linear   VRT 06-MAY-2021
DEFINITION  primary cilium assembly protein FAM149B1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331328
VERSION     XP_041331328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="primary cilium assembly protein FAM149B1"
                     /calculated_mol_wt=64422
     Region          104..170
                     /region_name="DUF3719"
                     /note="Protein of unknown function (DUF3719); pfam12516"
                     /db_xref="CDD:463617"
     CDS             1..586
                     /gene="FAM149B1"
                     /coded_by="XM_041475394.1:85..1845"
                     /db_xref="GeneID:121357783"
ORIGIN      
        1 misryarkpv qaqglpkhal rhhpppepga qvcsatstag nlaqtsresg ihkgsndhgd
       61 artasqgcad tstedssvfs wgydefdkaa tqqvqqmfrq vdellyeqke tvhveglree
      121 chqwsssfph lrvvgkqvva ptdegygwys sspsgslaps dvsspqekds defsvlgkkv
      181 plfvapahkk anpskaptlc ssesgegeee vilsegivee ylafdhrdve eelherkmgl
      241 ssgrrklgfp pvspyscmkd svltfvfddv wsevlvcmee licrhwegsa sddekniitv
      301 etlradarsp lqldplpall prvphtkmps vasnlcpkpr ggrkskkrrk tpqvslsqgs
      361 ssssqrnlng lmvihgiqlh qrnlpvvekt lelddkrpgs ssllstrtwp nrslelstss
      421 lsrctrrrnp pprtlhpigt prsgedvcrr lltaqeqlts psplllnrnh plppiatttv
      481 aeqgsttgph rqtkprgnss hahrvttqed trqqlqaqlf lpdpfsrpnt tttssphsqr
      541 rrsctvtdss nqswtrrgst ssglpsrgsv kahgrsasgt kskqrh
//
LOCUS       XP_041331341             543 aa            linear   VRT 06-MAY-2021
DEFINITION  chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331341
VERSION     XP_041331341.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475407.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..543
                     /product="chondroitin sulfate
                     N-acetylgalactosaminyltransferase 2"
                     /calculated_mol_wt=62449
     Region          77..517
                     /region_name="CHGN"
                     /note="Chondroitin N-acetylgalactosaminyltransferase;
                     pfam05679"
                     /db_xref="CDD:461712"
     CDS             1..543
                     /gene="CSGALNACT2"
                     /coded_by="XM_041475407.1:622..2253"
                     /db_xref="GeneID:121357788"
ORIGIN      
        1 mrmprrglvi qartrwllvg lallfslvll myllecapqt dgngslpgvv gesmgkeyyq
       61 allqeqeehy qnratslkrq iaqlkqelqe msdklkslqe kkspkingmn yqgtkeqtsn
      121 dlleflhsqi dkaevsvgak lpseygvipf esftsmkvfq lemgltrhpe ekpvrkdkrd
      181 elvevieagl evinnpdeed gqdeddgvgd rqlysendfi egyyrterdk gtqyelfykk
      241 tdgmeyrhvt lfrpfgplmk vksetvdisr siinvivpla grteafaqfm qnfrdvcihq
      301 dkrvhltvvy fgqdglsevk silesvaret dfhnytlvsl neefnrgrgl dmgarawekg
      361 evlmffcdvd vyftaeflns crlnaepgkk vfypvvfsly npaivyanqd ipppveqqlv
      421 hkkdsgfwrd fgfgmtcqyr tdfltvggfd levkgwgged vhlyrkylhg elmvvrtpvp
      481 glfhlwhekh cadeltpeqy rmciqskamn eashshlgml vfrdeieahl rkqayrtnse
      541 aar
//
LOCUS       XP_041331380             483 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-GEF domain-containing family member 1A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331380
VERSION     XP_041331380.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475446.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..483
                     /product="ras-GEF domain-containing family member 1A
                     isoform X1"
                     /calculated_mol_wt=55760
     Region          49..166
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cd06224"
                     /db_xref="CDD:100121"
     Site            order(60,113,117..118,121,124..125,159..160,163)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          220..413
                     /region_name="RasGEF"
                     /note="RasGEF domain; pfam00617"
                     /db_xref="CDD:459872"
     Site            order(245..246,254,265..266,268..270,272..273,276..277,
                     280,313,316..317,319..321,323..326,328..329,346,349,
                     354..356,359,383..385,388..390,392..394,396..399,414,418,
                     451,454..455)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..483
                     /gene="RASGEF1A"
                     /coded_by="XM_041475446.1:107..1558"
                     /db_xref="GeneID:121357816"
ORIGIN      
        1 mllqgqetmp qtpifssmlg sscsgqvqpd mgercvdpvy qdgnlvsgsl ealierlvpt
       61 mdyypdrtyi ftfllssrvf ihphellakv gqicikqkqq levgteaeka klksfaakii
      121 qllkewtetf pydfqdeksm kelkeiahri tqcdeengtv kkiisqmtqn llmalsarsq
      181 yqeirekfrq pvtdkgtilk tkpqstqkdi lsvccdplil aqqltyiele rvsniypedl
      241 mqivshmdsl dnhkcrsdvt ktynleaydn wfnclsmlva teicrvvkkk qrtrmveffi
      301 dvarecfnig nfnsmmaiis gmnlspvarl kktwskvkta kfdvlehhmd pssnfcnyrt
      361 alqgaaqrsq sanssrekiv ipvfnlfikd iyflhkihtn rlpngqinfk kfweisrqih
      421 dfltwkqvec pfekdkkiqt ylltapiyse ealfiasfes egpenhmekd swktlrttll
      481 nra
//
LOCUS       XP_041331391             479 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-GEF domain-containing family member 1A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331391
VERSION     XP_041331391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..479
                     /product="ras-GEF domain-containing family member 1A
                     isoform X2"
                     /calculated_mol_wt=55376
     Region          45..162
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cd06224"
                     /db_xref="CDD:100121"
     Site            order(56,109,113..114,117,120..121,155..156,159)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          216..409
                     /region_name="RasGEF"
                     /note="RasGEF domain; pfam00617"
                     /db_xref="CDD:459872"
     Site            order(241..242,250,261..262,264..266,268..269,272..273,
                     276,309,312..313,315..317,319..322,324..325,342,345,
                     350..352,355,379..381,384..386,388..390,392..395,410,414,
                     447,450..451)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..479
                     /gene="RASGEF1A"
                     /coded_by="XM_041475457.1:87..1526"
                     /db_xref="GeneID:121357816"
ORIGIN      
        1 mretmpqtpi fssmlgsscs gqvqpdmger cvdpvyqdgn lvsgsleali erlvptmdyy
       61 pdrtyiftfl lssrvfihph ellakvgqic ikqkqqlevg teaekaklks faakiiqllk
      121 ewtetfpydf qdeksmkelk eiahritqcd eengtvkkii sqmtqnllma lsarsqyqei
      181 rekfrqpvtd kgtilktkpq stqkdilsvc cdplilaqql tyielervsn iypedlmqiv
      241 shmdsldnhk crsdvtktyn leaydnwfnc lsmlvateic rvvkkkqrtr mveffidvar
      301 ecfnignfns mmaiisgmnl spvarlkktw skvktakfdv lehhmdpssn fcnyrtalqg
      361 aaqrsqsans srekivipvf nlfikdiyfl hkihtnrlpn gqinfkkfwe isrqihdflt
      421 wkqvecpfek dkkiqtyllt apiyseealf iasfesegpe nhmekdswkt lrttllnra
//
LOCUS       XP_041331405             239 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCHC domain-containing protein 24 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331405
VERSION     XP_041331405.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475471.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..239
                     /product="zinc finger CCHC domain-containing protein 24"
                     /calculated_mol_wt=26787
     Region          <101..>155
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Region          127..147
                     /region_name="zf-CCHC_2"
                     /note="Zinc knuckle; pfam13696"
                     /db_xref="CDD:463959"
     Region          162..228
                     /region_name="zf-3CxxC_2"
                     /note="Zinc-binding domain; pfam17180"
                     /db_xref="CDD:407306"
     CDS             1..239
                     /gene="ZCCHC24"
                     /coded_by="XM_041475471.1:379..1098"
                     /db_xref="GeneID:121357821"
ORIGIN      
        1 msllstidts aapvyqpaql lnwvylslqd thqasafdaf rpepsssqhp dlgytkstpe
       61 lgsslsssyl nsffqlqrse alssslyksa spygslnniv dglssltehf sdlslssear
      121 kpskrpppny lchlcfnkgh yikdcpqarp kgegltpyqg kkrcfgeykc pkckrkwmsg
      181 nswanmgqec ikchinvyph kqrplekpdg ldvsdqskeh pqhlcekckv lgyycrrvq
//
LOCUS       XP_041331417             302 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331417
VERSION     XP_041331417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="cyclin-dependent kinase 1"
                     /calculated_mol_wt=34543
     Region          3..287
                     /region_name="STKc_CDK1_euk"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 1 from higher eukaryotes;
                     cd07861"
                     /db_xref="CDD:270845"
     Site            order(10..13,18,31,33,50,64,80..83,86,88..89,128,130,
                     132..133,135,146,149,161,163..166,168,206..207)
                     /site_type="active"
                     /db_xref="CDD:270845"
     Site            order(10..13,18,31,33,64,80..83,86,89,132..133,135,146)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270845"
     Site            order(37,42..44,46,49..50,52..53,56..57,71,117,120..123,
                     151..153,155..156,160..161,273,277..279)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270845"
     Site            order(50,88,128,130,149,161,163..166,168,206..207)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270845"
     Site            145..168
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270845"
     CDS             1..302
                     /gene="CDK1"
                     /coded_by="XM_041475483.1:23..931"
                     /db_xref="GeneID:121357828"
ORIGIN      
        1 mddytkieki gegtygvvyk grhkttgqvv amkkirlese eegvpstair eisllkelnh
       61 pnivclqdvl mqdsrlylvf eflsmdlkky ldsipsgqyl ersrvksyly qilqgivfch
      121 srrvlhrdlk pqnlliddkg vikladfgla rafgipvrvy thevvtlwyr spevllgsar
      181 ystpvdiwsi gtifaelatk kplfhgdsei dqifrifral gtpnnevwpe veslqdyknt
      241 fpkwkpvsle thvknldkdg ldllakmliy dpakrisgkm alnhpyfddl dkstlpanli
      301 kk
//
LOCUS       XP_041331451            1145 aa            linear   VRT 06-MAY-2021
DEFINITION  wings apart-like protein homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331451
VERSION     XP_041331451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1145
                     /product="wings apart-like protein homolog isoform X1"
                     /calculated_mol_wt=127139
     Region          594..954
                     /region_name="WAPL"
                     /note="Wings apart-like protein regulation of
                     heterochromatin; pfam07814"
                     /db_xref="CDD:462278"
     CDS             1..1145
                     /gene="WAPL"
                     /coded_by="XM_041475517.1:23..3460"
                     /db_xref="GeneID:121357845"
ORIGIN      
        1 mtsrfgktys rkggngsskf devfsnkrtt lstkwgettf maklgqkrps vkpdisevpk
       61 kpkvedevte dpfgfdsdee slpvssknvs qaksssqlep geaaqsedft plleansrin
      121 qpdsgenvas skcipfdntv pllkekstsr svedgeckgs saklvtadki qnlkedngns
      181 hfiydnagds nktnaettnt sgcnteakdl pdswdshvgk tadcpsetsq tkgplrthly
      241 ewedetedtr tgeyilgfdn ehlsevkskd eecdkedsen pkeaiseelv qtiprpsncr
      301 tycrsnkakl qgatnfdklm dgtsqslska nnesnndgln agkkgslssg tsfrgtvgrt
      361 rdytvlhpsc lsvcnvtiqd tmermdefts aaptdlgeag rlrkkadmat tktttrfrps
      421 ntkskkdvkl effgfddqde gggdegasrs sgssnykiky fgfddlsese dedeewqvae
      481 rkankkrsrt vpsaslqsts dgnencsqds qlstnadlef pedasgvleg nkkstnkqgd
      541 kskentrkif sgpkrsptka vynarhwnqp esealpvppa lktpsvplyt vvqhvkhfnd
      601 vvefgenqef tddieyllsg lksnqplntr clsvislatk campsfrmhl rahgmvamvf
      661 ktlddsqhhq nlslctaalm yilsrdrlnm dldrasldlm irlleleqda ssakllnekd
      721 mnkikekirr lcetvhnkhl dlenittghl ametllslts kragdwfkee lrllggldhi
      781 vdkvkecvdh lssdeneekl vaslwgaerc lrvlesvtvh npenqsylia ykdsqlivss
      841 akalqhceel iqrynraeds iclpdnksvp hqnvtnhvgk avedcmraii gvllnltndn
      901 ewgstktgeq dgligtamnc vlqvpkflpq eqrfdirvlg lgllinlvey sarnrhclvn
      961 metscsfdsl ctgegdeslk itgqidavqa lvqlflecer aaqlaesqtd elikeaptaq
     1021 hdksgewqet sgeiqwvste ksdsteekdk keeddeeldl nkalqhagkh medcivasyt
     1081 alllgclcqe spinvttvre ylpegdfsim temlkkflsf mnltcavgtt gqksisrvie
     1141 ylehc
//
LOCUS       XP_041331461            1196 aa            linear   VRT 06-MAY-2021
DEFINITION  wings apart-like protein homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331461
VERSION     XP_041331461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1196
                     /product="wings apart-like protein homolog isoform X2"
                     /calculated_mol_wt=132823
     Region          645..1005
                     /region_name="WAPL"
                     /note="Wings apart-like protein regulation of
                     heterochromatin; pfam07814"
                     /db_xref="CDD:462278"
     CDS             1..1196
                     /gene="WAPL"
                     /coded_by="XM_041475527.1:242..3832"
                     /db_xref="GeneID:121357845"
ORIGIN      
        1 mtsrfgktys rkggngsskf devfsnkrtt lstkwgettf maklgqkrps vkpdisevpk
       61 kpkvedevte dpfgfdsdee slpvssknvs qaksssqlep geaaqsedft plleansrin
      121 qpdsgenvas skcipfdntv pllkekstsr svedgeckgs saklvtadki qnlkedngns
      181 hfiydnagds nktnaettnt sgcnteakdl pdswdshvgk tadcpsetsq tkgplrthly
      241 ewedetedtr tgeyilgfdn ehlsevkskd eecdkedsen pkeaiseelv qtiprpsncr
      301 tycrsnkakl qgatnfdklm dgtsqslska nnesnndgln agkkgslssg tsfrgtvgrt
      361 rdytvlhpsc lsvcnvtiqd tmermdefts aaptdlgeag rlrkkadmat tktttrfrps
      421 ntkskkdvkl effgfddqde gggdegasrs sgssnykiky fgfddlsese dedeewqvae
      481 rkankkrsrt vpsaslqsts dgnencsqds qlstnadlef pedasgvleg nkkstnkqgd
      541 kskentrkif sgpkrsptka vynarhwnqp esealpvppa lktpsvpvrl sskeaihkdd
      601 gvfkapappp kviktvtipt qpyqeivtal kcrkedkely tvvqhvkhfn dvvefgenqe
      661 ftddieylls glksnqplnt rclsvislat kcampsfrmh lrahgmvamv fktlddsqhh
      721 qnlslctaal myilsrdrln mdldrasldl mirlleleqd assakllnek dmnkikekir
      781 rlcetvhnkh ldlenittgh lametllslt skragdwfke elrllggldh ivdkvkecvd
      841 hlssdeneek lvaslwgaer clrvlesvtv hnpenqsyli aykdsqlivs sakalqhcee
      901 liqrynraed siclpdnksv phqnvtnhvg kavedcmrai igvllnltnd newgstktge
      961 qdgligtamn cvlqvpkflp qeqrfdirvl glgllinlve ysarnrhclv nmetscsfds
     1021 lctgegdesl kitgqidavq alvqlflece raaqlaesqt delikeapta qhdksgewqe
     1081 tsgeiqwvst eksdsteekd kkeeddeeld lnkalqhagk hmedcivasy talllgclcq
     1141 espinvttvr eylpegdfsi mtemlkkfls fmnltcavgt tgqksisrvi eylehc
//
LOCUS       XP_041331468            1196 aa            linear   VRT 06-MAY-2021
DEFINITION  wings apart-like protein homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041331468
VERSION     XP_041331468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475534.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1196
                     /product="wings apart-like protein homolog isoform X2"
                     /calculated_mol_wt=132823
     Region          645..1005
                     /region_name="WAPL"
                     /note="Wings apart-like protein regulation of
                     heterochromatin; pfam07814"
                     /db_xref="CDD:462278"
     CDS             1..1196
                     /gene="WAPL"
                     /coded_by="XM_041475534.1:163..3753"
                     /db_xref="GeneID:121357845"
ORIGIN      
        1 mtsrfgktys rkggngsskf devfsnkrtt lstkwgettf maklgqkrps vkpdisevpk
       61 kpkvedevte dpfgfdsdee slpvssknvs qaksssqlep geaaqsedft plleansrin
      121 qpdsgenvas skcipfdntv pllkekstsr svedgeckgs saklvtadki qnlkedngns
      181 hfiydnagds nktnaettnt sgcnteakdl pdswdshvgk tadcpsetsq tkgplrthly
      241 ewedetedtr tgeyilgfdn ehlsevkskd eecdkedsen pkeaiseelv qtiprpsncr
      301 tycrsnkakl qgatnfdklm dgtsqslska nnesnndgln agkkgslssg tsfrgtvgrt
      361 rdytvlhpsc lsvcnvtiqd tmermdefts aaptdlgeag rlrkkadmat tktttrfrps
      421 ntkskkdvkl effgfddqde gggdegasrs sgssnykiky fgfddlsese dedeewqvae
      481 rkankkrsrt vpsaslqsts dgnencsqds qlstnadlef pedasgvleg nkkstnkqgd
      541 kskentrkif sgpkrsptka vynarhwnqp esealpvppa lktpsvpvrl sskeaihkdd
      601 gvfkapappp kviktvtipt qpyqeivtal kcrkedkely tvvqhvkhfn dvvefgenqe
      661 ftddieylls glksnqplnt rclsvislat kcampsfrmh lrahgmvamv fktlddsqhh
      721 qnlslctaal myilsrdrln mdldrasldl mirlleleqd assakllnek dmnkikekir
      781 rlcetvhnkh ldlenittgh lametllslt skragdwfke elrllggldh ivdkvkecvd
      841 hlssdeneek lvaslwgaer clrvlesvtv hnpenqsyli aykdsqlivs sakalqhcee
      901 liqrynraed siclpdnksv phqnvtnhvg kavedcmrai igvllnltnd newgstktge
      961 qdgligtamn cvlqvpkflp qeqrfdirvl glgllinlve ysarnrhclv nmetscsfds
     1021 lctgegdesl kitgqidavq alvqlflece raaqlaesqt delikeapta qhdksgewqe
     1081 tsgeiqwvst eksdsteekd kkeeddeeld lnkalqhagk hmedcivasy talllgclcq
     1141 espinvttvr eylpegdfsi mtemlkkfls fmnltcavgt tgqksisrvi eylehc
//
LOCUS       XP_041331480             755 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331480
VERSION     XP_041331480.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475546.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..755
                     /product="LIM domain-binding protein 3 isoform X1"
                     /calculated_mol_wt=80864
     Region          4..82
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(12..18,30,33,62,66,69..70)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          207..310
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          304..>524
                     /region_name="PRK12727"
                     /note="flagellar biosynthesis protein FlhF"
                     /db_xref="CDD:237182"
     Region          <446..>577
                     /region_name="PHA03379"
                     /note="EBNA-3A; Provisional"
                     /db_xref="CDD:223066"
     Region          579..630
                     /region_name="LIM1_ZASP_Cypher"
                     /note="The first LIM domain of ZASP/Cypher family;
                     cd09454"
                     /db_xref="CDD:188838"
     Site            order(579,582,599,602,605,608,626,629)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188838"
     Region          638..689
                     /region_name="LIM2_Enigma_like"
                     /note="The second LIM domain of Enigma-like family;
                     cd09362"
                     /db_xref="CDD:188748"
     Site            order(638,641,658,661,664,667,685,688)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188748"
     Region          697..751
                     /region_name="LIM3_ZASP_Cypher"
                     /note="The third LIM domain of ZASP/Cypher family;
                     cd09460"
                     /db_xref="CDD:188844"
     Site            order(697,700,719,722,725,728,746,749)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188844"
     CDS             1..755
                     /gene="LDB3"
                     /coded_by="XM_041475546.1:172..2439"
                     /db_xref="GeneID:121357858"
ORIGIN      
        1 maysvtlngp gpwgfrlqgg kdfnmpltis ritpgskaaq sqmnqgdlvv aidgvntdsm
       61 thleaqnkik sashnlsltl qkskrpvpvs ttapridspr aviphqkepa wemngnrttf
      121 spltntatgp mgsvlatngt fsgylnqqei slsnsssylk tttvrssmss qsvtpdispa
      181 ksslgskasp alaggsspah qlsparqynn piglysaetl remaemhkls lnrraseggl
      241 prgtlpikdp hvdsaspvyq avlktqnkpe ddsedwsrrs anlqsksfri laqmtgteym
      301 qdpdeealrr srdkenlaaa senrptgtah apqyvtssiw hppksstrda ntanaqpvas
      361 kgsvrlgagt sqgeagvgqk aplasssnqs tpvehapvap ssaapaphas apqpataapn
      421 taslmaapat tsvvqesfss sfqrntvqsy tpmpvsggys espapsaask mrvvttasik
      481 psvyqpapap vhsytpante pasrppwvtd dsfsqkfapg kstttvtkhi lprgapvlsp
      541 atipaypspv stpsqppala rgtvqraerf passrtplcg hcnsiirgpf lvamgrswhp
      601 eefncayckt sladmcfvee qnsvycercy eqffaptcar chtkimgevm halrqtwhts
      661 cfvcaackkp fgnslfhmed gepycekdyi alfstkchgc dypveagdkf iealghtwhd
      721 tcficavchv nlegqpfysk kdkplckkha hainv
//
LOCUS       XP_041331488             755 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331488
VERSION     XP_041331488.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475554.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..755
                     /product="LIM domain-binding protein 3 isoform X1"
                     /calculated_mol_wt=80864
     Region          4..82
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(12..18,30,33,62,66,69..70)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          207..310
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          304..>524
                     /region_name="PRK12727"
                     /note="flagellar biosynthesis protein FlhF"
                     /db_xref="CDD:237182"
     Region          <446..>577
                     /region_name="PHA03379"
                     /note="EBNA-3A; Provisional"
                     /db_xref="CDD:223066"
     Region          579..630
                     /region_name="LIM1_ZASP_Cypher"
                     /note="The first LIM domain of ZASP/Cypher family;
                     cd09454"
                     /db_xref="CDD:188838"
     Site            order(579,582,599,602,605,608,626,629)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188838"
     Region          638..689
                     /region_name="LIM2_Enigma_like"
                     /note="The second LIM domain of Enigma-like family;
                     cd09362"
                     /db_xref="CDD:188748"
     Site            order(638,641,658,661,664,667,685,688)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188748"
     Region          697..751
                     /region_name="LIM3_ZASP_Cypher"
                     /note="The third LIM domain of ZASP/Cypher family;
                     cd09460"
                     /db_xref="CDD:188844"
     Site            order(697,700,719,722,725,728,746,749)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188844"
     CDS             1..755
                     /gene="LDB3"
                     /coded_by="XM_041475554.1:132..2399"
                     /db_xref="GeneID:121357858"
ORIGIN      
        1 maysvtlngp gpwgfrlqgg kdfnmpltis ritpgskaaq sqmnqgdlvv aidgvntdsm
       61 thleaqnkik sashnlsltl qkskrpvpvs ttapridspr aviphqkepa wemngnrttf
      121 spltntatgp mgsvlatngt fsgylnqqei slsnsssylk tttvrssmss qsvtpdispa
      181 ksslgskasp alaggsspah qlsparqynn piglysaetl remaemhkls lnrraseggl
      241 prgtlpikdp hvdsaspvyq avlktqnkpe ddsedwsrrs anlqsksfri laqmtgteym
      301 qdpdeealrr srdkenlaaa senrptgtah apqyvtssiw hppksstrda ntanaqpvas
      361 kgsvrlgagt sqgeagvgqk aplasssnqs tpvehapvap ssaapaphas apqpataapn
      421 taslmaapat tsvvqesfss sfqrntvqsy tpmpvsggys espapsaask mrvvttasik
      481 psvyqpapap vhsytpante pasrppwvtd dsfsqkfapg kstttvtkhi lprgapvlsp
      541 atipaypspv stpsqppala rgtvqraerf passrtplcg hcnsiirgpf lvamgrswhp
      601 eefncayckt sladmcfvee qnsvycercy eqffaptcar chtkimgevm halrqtwhts
      661 cfvcaackkp fgnslfhmed gepycekdyi alfstkchgc dypveagdkf iealghtwhd
      721 tcficavchv nlegqpfysk kdkplckkha hainv
//
LOCUS       XP_041331497             689 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331497
VERSION     XP_041331497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..689
                     /product="LIM domain-binding protein 3 isoform X2"
                     /calculated_mol_wt=74254
     Region          4..82
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(12..18,30,33,62,66,69..70)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          207..310
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          <380..>511
                     /region_name="PHA03379"
                     /note="EBNA-3A; Provisional"
                     /db_xref="CDD:223066"
     Region          513..564
                     /region_name="LIM1_ZASP_Cypher"
                     /note="The first LIM domain of ZASP/Cypher family;
                     cd09454"
                     /db_xref="CDD:188838"
     Site            order(513,516,533,536,539,542,560,563)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188838"
     Region          572..623
                     /region_name="LIM2_Enigma_like"
                     /note="The second LIM domain of Enigma-like family;
                     cd09362"
                     /db_xref="CDD:188748"
     Site            order(572,575,592,595,598,601,619,622)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188748"
     Region          631..685
                     /region_name="LIM3_ZASP_Cypher"
                     /note="The third LIM domain of ZASP/Cypher family;
                     cd09460"
                     /db_xref="CDD:188844"
     Site            order(631,634,653,656,659,662,680,683)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188844"
     CDS             1..689
                     /gene="LDB3"
                     /coded_by="XM_041475563.1:172..2241"
                     /db_xref="GeneID:121357858"
ORIGIN      
        1 maysvtlngp gpwgfrlqgg kdfnmpltis ritpgskaaq sqmnqgdlvv aidgvntdsm
       61 thleaqnkik sashnlsltl qkskrpvpvs ttapridspr aviphqkepa wemngnrttf
      121 spltntatgp mgsvlatngt fsgylnqqei slsnsssylk tttvrssmss qsvtpdispa
      181 ksslgskasp alaggsspah qlsparqynn piglysaetl remaemhkls lnrraseggl
      241 prgtlpikdp hvdsaspvyq avlktqnkpe ddsedwsrrs anlqsksfri laqmtgteym
      301 qdpdeealrr srdkenlaaa senstpveha pvapssaapa phasapqpat aapntaslma
      361 apattsvvqe sfsssfqrnt vqsytpmpvs ggysespaps aaskmrvvtt asikpsvyqp
      421 apapvhsytp antepasrpp wvtddsfsqk fapgkstttv tkhilprgap vlspatipay
      481 pspvstpsqp palargtvqr aerfpassrt plcghcnsii rgpflvamgr swhpeefnca
      541 ycktsladmc fveeqnsvyc ercyeqffap tcarchtkim gevmhalrqt whtscfvcaa
      601 ckkpfgnslf hmedgepyce kdyialfstk chgcdypvea gdkfiealgh twhdtcfica
      661 vchvnlegqp fyskkdkplc kkhahainv
//
LOCUS       XP_041331504             635 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041331504
VERSION     XP_041331504.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475570.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..635
                     /product="LIM domain-binding protein 3 isoform X3"
                     /calculated_mol_wt=69042
     Region          4..82
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(12..18,30,33,62,66,69..70)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          207..310
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          <326..>457
                     /region_name="PHA03379"
                     /note="EBNA-3A; Provisional"
                     /db_xref="CDD:223066"
     Region          459..510
                     /region_name="LIM1_ZASP_Cypher"
                     /note="The first LIM domain of ZASP/Cypher family;
                     cd09454"
                     /db_xref="CDD:188838"
     Site            order(459,462,479,482,485,488,506,509)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188838"
     Region          518..569
                     /region_name="LIM2_Enigma_like"
                     /note="The second LIM domain of Enigma-like family;
                     cd09362"
                     /db_xref="CDD:188748"
     Site            order(518,521,538,541,544,547,565,568)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188748"
     Region          577..631
                     /region_name="LIM3_ZASP_Cypher"
                     /note="The third LIM domain of ZASP/Cypher family;
                     cd09460"
                     /db_xref="CDD:188844"
     Site            order(577,580,599,602,605,608,626,629)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188844"
     CDS             1..635
                     /gene="LDB3"
                     /coded_by="XM_041475570.1:172..2079"
                     /db_xref="GeneID:121357858"
ORIGIN      
        1 maysvtlngp gpwgfrlqgg kdfnmpltis ritpgskaaq sqmnqgdlvv aidgvntdsm
       61 thleaqnkik sashnlsltl qkskrpvpvs ttapridspr aviphqkepa wemngnrttf
      121 spltntatgp mgsvlatngt fsgylnqqei slsnsssylk tttvrssmss qsvtpdispa
      181 ksslgskasp alaggsspah qlsparqynn piglysaetl remaemhkls lnrraseggl
      241 prgtlpikdp hvdsaspvyq avlktqnkpe ddsedwsrrs anlqsksfri laqmtgteym
      301 qdpdeealrr srdkenlaaa senrntvqsy tpmpvsggys espapsaask mrvvttasik
      361 psvyqpapap vhsytpante pasrppwvtd dsfsqkfapg kstttvtkhi lprgapvlsp
      421 atipaypspv stpsqppala rgtvqraerf passrtplcg hcnsiirgpf lvamgrswhp
      481 eefncayckt sladmcfvee qnsvycercy eqffaptcar chtkimgevm halrqtwhts
      541 cfvcaackkp fgnslfhmed gepycekdyi alfstkchgc dypveagdkf iealghtwhd
      601 tcficavchv nlegqpfysk kdkplckkha hainv
//
LOCUS       XP_041331512             627 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041331512
VERSION     XP_041331512.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475578.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="LIM domain-binding protein 3 isoform X4"
                     /calculated_mol_wt=67373
     Region          4..82
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(12..18,30,33,62,66,69..70)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          <104..182
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          176..>396
                     /region_name="PRK12727"
                     /note="flagellar biosynthesis protein FlhF"
                     /db_xref="CDD:237182"
     Region          <318..>449
                     /region_name="PHA03379"
                     /note="EBNA-3A; Provisional"
                     /db_xref="CDD:223066"
     Region          451..502
                     /region_name="LIM1_ZASP_Cypher"
                     /note="The first LIM domain of ZASP/Cypher family;
                     cd09454"
                     /db_xref="CDD:188838"
     Site            order(451,454,471,474,477,480,498,501)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188838"
     Region          510..561
                     /region_name="LIM2_Enigma_like"
                     /note="The second LIM domain of Enigma-like family;
                     cd09362"
                     /db_xref="CDD:188748"
     Site            order(510,513,530,533,536,539,557,560)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188748"
     Region          569..623
                     /region_name="LIM3_ZASP_Cypher"
                     /note="The third LIM domain of ZASP/Cypher family;
                     cd09460"
                     /db_xref="CDD:188844"
     Site            order(569,572,591,594,597,600,618,621)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188844"
     CDS             1..627
                     /gene="LDB3"
                     /coded_by="XM_041475578.1:172..2055"
                     /db_xref="GeneID:121357858"
ORIGIN      
        1 maysvtlngp gpwgfrlqgg kdfnmpltis ritpgskaaq sqmnqgdlvv aidgvntdsm
       61 thleaqnkik sashnlsltl qkskrpvpvs ttapridspr aviphqkvit ntaantlpik
      121 dphvdsaspv yqavlktqnk peddsedwsr rsanlqsksf rilaqmtgte ymqdpdeeal
      181 rrsrdkenla aasenrptgt ahapqyvtss iwhppksstr dantanaqpv askgsvrlga
      241 gtsqgeagvg qkaplasssn qstpvehapv apssaapaph asapqpataa pntaslmaap
      301 attsvvqesf sssfqrntvq sytpmpvsgg ysespapsaa skmrvvttas ikpsvyqpap
      361 apvhsytpan tepasrppwv tddsfsqkfa pgkstttvtk hilprgapvl spatipayps
      421 pvstpsqppa largtvqrae rfpassrtpl cghcnsiirg pflvamgrsw hpeefncayc
      481 ktsladmcfv eeqnsvycer cyeqffaptc archtkimge vmhalrqtwh tscfvcaack
      541 kpfgnslfhm edgepycekd yialfstkch gcdypveagd kfiealghtw hdtcficavc
      601 hvnlegqpfy skkdkplckk hahainv
//
LOCUS       XP_041331519             695 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-binding protein 3 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041331519
VERSION     XP_041331519.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475585.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..695
                     /product="LIM domain-binding protein 3 isoform X5"
                     /calculated_mol_wt=74578
     Region          4..82
                     /region_name="PDZ_PDLIM-like"
                     /note="PDZ domain of PDZ-LIM family proteins, and related
                     domains; cd06753"
                     /db_xref="CDD:467235"
     Site            order(12..18,30,33,62,66,69..70)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467235"
     Region          148..250
                     /region_name="DUF4749"
                     /note="Domain of unknown function (DUF4749); pfam15936"
                     /db_xref="CDD:464948"
     Region          244..>464
                     /region_name="PRK12727"
                     /note="flagellar biosynthesis protein FlhF"
                     /db_xref="CDD:237182"
     Region          <386..>517
                     /region_name="PHA03379"
                     /note="EBNA-3A; Provisional"
                     /db_xref="CDD:223066"
     Region          519..570
                     /region_name="LIM1_ZASP_Cypher"
                     /note="The first LIM domain of ZASP/Cypher family;
                     cd09454"
                     /db_xref="CDD:188838"
     Site            order(519,522,539,542,545,548,566,569)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188838"
     Region          578..629
                     /region_name="LIM2_Enigma_like"
                     /note="The second LIM domain of Enigma-like family;
                     cd09362"
                     /db_xref="CDD:188748"
     Site            order(578,581,598,601,604,607,625,628)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188748"
     Region          637..691
                     /region_name="LIM3_ZASP_Cypher"
                     /note="The third LIM domain of ZASP/Cypher family;
                     cd09460"
                     /db_xref="CDD:188844"
     Site            order(637,640,659,662,665,668,686,689)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188844"
     CDS             1..695
                     /gene="LDB3"
                     /coded_by="XM_041475585.1:172..2259"
                     /db_xref="GeneID:121357858"
ORIGIN      
        1 maysvtlngp gpwgfrlqgg kdfnmpltis ritpgskaaq sqmnqgdlvv aidgvntdsm
       61 thleaqnkik sashnlsltl qkskrpvpvs ttapridspr aviphqkvit ntaantdfte
      121 rfnpnvlkds alsthkpiev kglggkatii haqyntpism ysqdaimdai agqaqaqgge
      181 fagtlpikdp hvdsaspvyq avlktqnkpe ddsedwsrrs anlqsksfri laqmtgteym
      241 qdpdeealrr srdkenlaaa senrptgtah apqyvtssiw hppksstrda ntanaqpvas
      301 kgsvrlgagt sqgeagvgqk aplasssnqs tpvehapvap ssaapaphas apqpataapn
      361 taslmaapat tsvvqesfss sfqrntvqsy tpmpvsggys espapsaask mrvvttasik
      421 psvyqpapap vhsytpante pasrppwvtd dsfsqkfapg kstttvtkhi lprgapvlsp
      481 atipaypspv stpsqppala rgtvqraerf passrtplcg hcnsiirgpf lvamgrswhp
      541 eefncayckt sladmcfvee qnsvycercy eqffaptcar chtkimgevm halrqtwhts
      601 cfvcaackkp fgnslfhmed gepycekdyi alfstkchgc dypveagdkf iealghtwhd
      661 tcficavchv nlegqpfysk kdkplckkha hainv
//
LOCUS       XP_041331530             525 aa            linear   VRT 06-MAY-2021
DEFINITION  melanopsin [Pyrgilauda ruficollis].
ACCESSION   XP_041331530
VERSION     XP_041331530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..525
                     /product="melanopsin"
                     /calculated_mol_wt=57993
     Region          31..321
                     /region_name="7tmA_Melanopsin"
                     /note="vertebrate melanopsins (Opsin-4), member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15336"
                     /db_xref="CDD:320458"
     Region          32..58
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320458"
     Region          65..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320458"
     Region          103..133
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320458"
     Site            order(106,110..111,114..115,180..183,199..200,204,269,273,
                     296,300)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320458"
     Region          145..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320458"
     Region          192..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320458"
     Region          249..279
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320458"
     Region          289..314
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320458"
     CDS             1..525
                     /gene="OPN4"
                     /coded_by="XM_041475596.1:1..1578"
                     /db_xref="GeneID:121357894"
ORIGIN      
        1 mdlllraptk mtvqdapraf ptvdvpdhah ytigvvillv gitgtlgnfl vvyafcrsrs
       61 lrtpanilii nlaisdflms itqspvffts slykhwifge tgcelyafcg alfgitsmit
      121 lmvialdryf vitkplasvg vtskkkalii lvgvwlysla wslppffgws ayvpegllts
      181 cswdymtftp svraytmllf cfvffiplia iiysyvsife aikkanksiq tfgckcgnre
      241 fqkqyqrmkh ewkmakiali visffvisws pysvvalvaf agyshvltpf mnsipaviak
      301 asvihnpiiy aithpkyrra iatyvpclgp llrvspkdsr sfssyqssrr atvtsqssei
      361 sglqkgkmrl sslsdsesgc tetetdtpsm fsrlarrqis ydtdkdttqt sdirakvtsq
      421 dsgncgktav dadvilmvel nvteymatpt qtskacslee ikkseslnsi gqrkgeshqg
      481 sssaqipsit itcssvqgve lpsrynsgfl ypkssshrqn kksss
//
LOCUS       XP_041331561             435 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-15-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331561
VERSION     XP_041331561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..435
                     /product="synaptotagmin-15-like isoform X1"
                     /calculated_mol_wt=49320
     Region          165..286
                     /region_name="C2A_Synaptotagmin-15-17"
                     /note="C2A domain first repeat present in Synaptotagmins
                     15 and 17; cd08390"
                     /db_xref="CDD:176036"
     Region          296..432
                     /region_name="C2B_Synaptotagmin-15"
                     /note="C2 domain second repeat present in Synaptotagmin
                     15; cd08409"
                     /db_xref="CDD:176054"
     CDS             1..435
                     /gene="LOC121357911"
                     /coded_by="XM_041475627.1:75..1382"
                     /db_xref="GeneID:121357911"
ORIGIN      
        1 mpeqavavag giiggillff ligvtayllw kkfcrlssye klinpvkttn anaifqdqan
       61 seihlkstsl issfkpeesi gavvlsrsrs vpfiipptlh grdwvhltne eqvqqdrdpf
      121 mtpqsgprss fhslagayvv gtinpdlykf pedksetdfp dgsigrlwfs ieyeqeserl
      181 lvslikvrkl qppadscspf vkiyllpder sylqsktkrk tlnpqfdenf vfqvsskmll
      241 qrtlkflvyh vdkqkkhhll gqvifplkne altednklvi wrdlekenle ppsehgdiqf
      301 slsyndylgr ltvvvlrarg lklqeespav gvyvkvslmn hnkfikskkt aallgtpnpv
      361 ynetfsfkad qteldtasls lsvlqsnkge ktlllgrvvv gpfmytrgre lehwnemisk
      421 pkelvkrwha lchst
//
LOCUS       XP_041331569             431 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-15-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331569
VERSION     XP_041331569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..431
                     /product="synaptotagmin-15-like isoform X2"
                     /calculated_mol_wt=48919
     Region          161..282
                     /region_name="C2A_Synaptotagmin-15-17"
                     /note="C2A domain first repeat present in Synaptotagmins
                     15 and 17; cd08390"
                     /db_xref="CDD:176036"
     Region          292..428
                     /region_name="C2B_Synaptotagmin-15"
                     /note="C2 domain second repeat present in Synaptotagmin
                     15; cd08409"
                     /db_xref="CDD:176054"
     CDS             1..431
                     /gene="LOC121357911"
                     /coded_by="XM_041475635.1:75..1370"
                     /db_xref="GeneID:121357911"
ORIGIN      
        1 mpeqavavag giiggillff ligvtayllw kkfcrlssye klinpvkttn anaifqdqan
       61 seihlkstsf kpeesigavv lsrsrsvpfi ipptlhgrdw vhltneeqvq qdrdpfmtpq
      121 sgprssfhsl agayvvgtin pdlykfpedk setdfpdgsi grlwfsieye qeserllvsl
      181 ikvrklqppa dscspfvkiy llpdersylq sktkrktlnp qfdenfvfqv sskmllqrtl
      241 kflvyhvdkq kkhhllgqvi fplknealte dnklviwrdl ekenleppse hgdiqfslsy
      301 ndylgrltvv vlrarglklq eespavgvyv kvslmnhnkf ikskktaall gtpnpvynet
      361 fsfkadqtel dtaslslsvl qsnkgektll lgrvvvgpfm ytrgrelehw nemiskpkel
      421 vkrwhalchs t
//
LOCUS       XP_041331579             417 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-15-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041331579
VERSION     XP_041331579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="synaptotagmin-15-like isoform X3"
                     /calculated_mol_wt=47475
     Region          147..268
                     /region_name="C2A_Synaptotagmin-15-17"
                     /note="C2A domain first repeat present in Synaptotagmins
                     15 and 17; cd08390"
                     /db_xref="CDD:176036"
     Region          278..414
                     /region_name="C2B_Synaptotagmin-15"
                     /note="C2 domain second repeat present in Synaptotagmin
                     15; cd08409"
                     /db_xref="CDD:176054"
     CDS             1..417
                     /gene="LOC121357911"
                     /coded_by="XM_041475645.1:75..1328"
                     /db_xref="GeneID:121357911"
ORIGIN      
        1 mpeqavavag giiggillff ligvtayllw kkfcrlssye klinpvkttn anaifqdqan
       61 seihlkstrs rsvpfiippt lhgrdwvhlt neeqvqqdrd pfmtpqsgpr ssfhslagay
      121 vvgtinpdly kfpedksetd fpdgsigrlw fsieyeqese rllvslikvr klqppadscs
      181 pfvkiyllpd ersylqsktk rktlnpqfde nfvfqvsskm llqrtlkflv yhvdkqkkhh
      241 llgqvifplk nealtednkl viwrdleken leppsehgdi qfslsyndyl grltvvvlra
      301 rglklqeesp avgvyvkvsl mnhnkfiksk ktaallgtpn pvynetfsfk adqteldtas
      361 lslsvlqsnk gektlllgrv vvgpfmytrg relehwnemi skpkelvkrw halchst
//
LOCUS       XP_041331593             820 aa            linear   VRT 06-MAY-2021
DEFINITION  shieldin complex subunit 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331593
VERSION     XP_041331593.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475659.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..820
                     /product="shieldin complex subunit 2"
                     /calculated_mol_wt=90659
     Region          643..817
                     /region_name="FAM35_C"
                     /note="Protein family FAM35, C-terminal; pfam15793"
                     /db_xref="CDD:464873"
     CDS             1..820
                     /gene="SHLD2"
                     /coded_by="XM_041475659.1:1733..4195"
                     /db_xref="GeneID:121357924"
ORIGIN      
        1 mserpqihif vgapsiprpr egseqssapa geqwrelrfl cnpgfvpgtl rgaaapsvpq
       61 aesstptgvp ssgdraqqgr fmaregkdlp spapvaltct stpkkstslt csdceeskdt
      121 fapanvdqaa dehlpqgcae sagqekpsga ccpelterka ppseisssdi salvasteqv
      181 sihlrsvglq aarrsecheh lspcmdvffq ksqeskpkep ndcadfavsa dtefrsvvtl
      241 sqvavfaqne mqesivklse teagkkaeeg qydhfqcdsg vgtcttavtg neyeeedass
      301 lelfsseddg envsikaikq eesaqenaek fqelnvpaeq lvngihiepl ssgircsqgn
      361 cshknsskrp lkhedsshls hsafkrqlks kraklnsspp gsgvrvdpdg maefkklqkk
      421 lsllknccsk nqkynilvtv vhpchikeiq kktkpkssck vpvativvid qseierkvvl
      481 wrgaafwslt vfpgdiillt diimyenpwc gevmlqstft sqllnlgncs alntekvypl
      541 vddgvlhgll ayissefphf rdipqrqvqr lddveyvqld qlqpstlvhs vlkiinisvl
      601 tesvysyrgg sqkkifltve qnrdqhyrmv lwgsgaawyp qlqrkkgvvq vkahilelkf
      661 tistgqykql vfsadtslec vlaslpmity sgcakcglel qadenmiykq cvrclpyskv
      721 ktfyrpalmt vedegyeiyv hvvselveki flnipadwlk rlvvpssdit ystivadlch
      781 slladteasy lleirshfvl densyplqkd fhllnfhpel
//
LOCUS       XP_041331604            4332 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331604
VERSION     XP_041331604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4332
                     /product="ankyrin-3 isoform X1"
                     /calculated_mol_wt=475003
     Region          1..305
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(73,75,79..80,83..85,87..88,92,95,104,106,108,
                     112..113,116..118,120..121,125,128,137,139,141,145..146,
                     149..151,153..154,158,161)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          73..104
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          106..137
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          139..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          191..470
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          205..232
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(234,236,240..241,244..246,248..249,253,256,265,267,
                     269,273..274,277..279,281..282,286,289,298,300,302,
                     306..307,310..312,314..315,319,322)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          234..265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          267..298
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          300..325
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          333..364
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          352..635
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          369..397
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          399..430
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          432..463
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(465,467,471..472,475..477,479..480,484,487,496,498,
                     500,504..505,508..510,512..513,517,520,529,531,533,
                     537..538,541..543,545..546,550,553)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          465..496
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          498..529
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..560
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          551..816
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          564..593
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(597,599,603..604,607..609,611..612,616,619,628,630,
                     632,636..637,640..642,644..645,649,652,661,663,665,
                     669..670,673..675,677..678,682,685,694)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          597..628
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          630..661
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          663..694
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(696,698,702..703,706..708,710..711,715,718,727,729,
                     731,735..736,739..741,743..744,748,751,760,762,764,
                     768..769,772..774,776..777,781,784)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          696..727
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          729..760
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          762..790
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          982..1086
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1308..1437
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          <2554..>3015
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          4044..4127
                     /region_name="Death_ank3"
                     /note="Death domain of Ankyrin-3; cd08803"
                     /db_xref="CDD:176781"
     CDS             1..4332
                     /gene="ANK3"
                     /coded_by="XM_041475670.1:1..12999"
                     /db_xref="GeneID:121357927"
ORIGIN      
        1 mahaasqlkk nrdleinaee etekkrkhrk rsrdrkkksd tnasylraar agnlekaldy
       61 lkngvdinis nqnglnalhl askeghvevv seliqrgasv daatkkgnta lhiaslagqa
      121 evvkvlvtnr anvnaqsqng ftplymaaqe nhlevvkfll dngasqslat edgftplava
      181 lqqghdqvvs lllendtkgk vrlpalhiaa rkddtkaaal llqndhnadv esksgftplh
      241 iaahygninv atlllnrgaa vdftarndit plhvaskrgn anmvkllldr gakidaktrd
      301 gltplhcgar sgheqvveml ldrgapilsk tknglsplhm atqgdhlncv qlliqhnvpv
      361 ddvtndylta lhvaahcghy kvakvlldkk anpnakalng ftplhiackk nrikvmelll
      421 khgasiqavt esgltpihva afmghvnivs qlmhhgaspn ttnvrgetal hmaaragqte
      481 vvrylvqnga qveakakddq tplhisarlg kadivqqllq qgaspnaatt sgytplhlsa
      541 reghedvasv lldhgaslsi itkkgftplh vaakygkiev anlllqknas pdasgksglt
      601 plhvaahydn qkvalllldq gasphasakn gytplhiaak knqmdiattl leygadanav
      661 trqgiaplhl asqdghvdmv slllsrnanv nlsnksgltp lhlaaqedrv nvaevlvnqg
      721 aavdaqtkmg ytplhvgchy gnikivnfll qhsakvnakt kngytplhqa aqqghthiin
      781 vllqhgaapn eltvngntal aiakrlgyis vvdtlkvvte etmttitvte khkmnvpetm
      841 nevldmsdde vrkanapeil sdaeylsdve egedamtgdt dkylgpqdlk elgddslpae
      901 gymgfslgar saslrsfssd rsytlnrssy ardsmmieel lvptkdqhlt fqrefdsdsl
      961 rhyswaadtl dnvnlvsspi hsgflvsfmv darggsmrgs rhhgmriiip prkctaptri
     1021 tcrlvkrhkl aspppmvege glasrlvemg pagaqflgpv iveiphfgsm rgkerelivl
     1081 rsengetwke hqydskhedl teilngmdee ldsveelekk ricrivtkdf pqyfavvsri
     1141 kqesnqigpe ggvlssttvp rvqasfpega ltkrirvglq aqpvpeeivk kilgnkatfs
     1201 pivtveprrr kfhkpitmti pvpppsgegv sngykgdttp slrllcsitg gtspaqwedi
     1261 tgttpltfsn dcvsfttnvs arfwladchq vletvglatq lyrelicvpy makfvifakm
     1321 ndpvesnlrc fcmtddkvdk tleqqenfee varskdievl egkpiyvdcy gnlapltkgg
     1381 qqlvfnfyaf kenrlpfsik vrdtsqepcg rlsflkepkt tkglpqtavc nlnitlpahk
     1441 ketesdqdde tekadrrqnf vslalrkrys yltepgmier sagatrslpa tysykpffst
     1501 rpyqswttap itvpgqtksg ftslsssssn tptasplksi wsvsstspik stlgasttss
     1561 vksvsdvasp irsfrtissp iktvvsqppy nmqvtsgsfi rapavteaas lkglastttf
     1621 psrtspvtta gsllerssit mtppaspksn inmyssslpl ksvitsassl lssplksvvs
     1681 paksavdavs stkvmmassl sspakhvagh tdvpllngsv splkypssan lingskaagv
     1741 fqdkisaaah satcaanava dtaervfsta ttmsfsplrs fvssapsafq smrtppagal
     1801 ytalgsisat tssvtsstit vpvysvvnvl sepalkklpe sssltksaaa llspiktltt
     1861 eartqptftr tsspiksslf lapsalklst psslsssqei lkdvaemked lirmtailqt
     1921 dvaedkpfqp dipkegridd eepfkivekv kedlvkvsei lkkdvclesk gsakvpksdq
     1981 ghlseddwve fsteeidear qqaltsppvs vpekvqiktk tmsekdysls kvidylandi
     2041 gsssltniky kfeegkkege erqkrilkpa ialqehklkm ppasmrpsts ekelckiads
     2101 ffgtdtiles pddfsqhdqd ksplsdsgfe trsektpsap qsaestgpkp lfhdvpippv
     2161 itetrtevvh virsyepsse dipeqkaeel paskpsptfm eleqkpsgsi kekvkafqmk
     2221 asgseeddhk cvlskgvrvk eethittttr mvyhkppcte stserieetm svhdimkafq
     2281 sgrdpskela glfehkssvt sdvsksaets pqhaekdskm kpkleriiev hieqgnqaep
     2341 teviiretkk hpekemyvyq kdlprgdinl kelekhdafp cseeqgqqee eeltaeeslp
     2401 sylessrvnt pvsqeedsrp ssaqlmsdds yktlkllsqh sieyhddels elrgesyrfa
     2461 ekmllsekld vshsdteesv tdhalplsae lqgtdkrcre kvatapkkei lskiykdvse
     2521 ngvgkmsked hydkvtvlhy tgdvsshkha mwmrftedrl drgrekliye drvdrtvkea
     2581 eekltevsqf frdkteklnd elqspekkqh kkngkeihss qssassspek vllselpssg
     2641 dewskvkqya qdgkcfpkvd erkasslpss pekriyvqpa edskrtmehk gsaqqtgvpe
     2701 tgfqlkqskl ssirlkfeqg isprskdvtp eekkmdgqsk ipvkklqesk lpvyqsysre
     2761 khakqievid gstalqkevk iqedlvpgkg kavedsrasd tqraemrkgm peciseprak
     2821 dlaygsdstt kghwdkkiyr twespgtsnh ktqkeklshv lvpdtvkenh vdhaesktdq
     2881 ksefitvteh kvasngihse evkeltvksp skrvlyrefv vregerngev adkiskrkee
     2941 iavshipvri veekramldg vyelsakvsq saviqekver qidyvedeki khseirkvtk
     3001 qqssiglspp aeetelspsk spdslecspg kefpssdtad pgasdylnkv aplvstegvk
     3061 eiktlpvyvs fvqvgkqyek evqqgsikki vsqesktvqe trgtfytarq qkqppspqgs
     3121 peddtleqvs fidssgkspl tpetpsseev syeftsktpd sliayipgkp spipevsees
     3181 eeeaeaksts vkqaeveepq idktlpslin kdsnkrpkgn rvayiefppp ppldadqges
     3241 ekkphystes ememtevnlq dehdkcqlae pvirvqppsp vppgadvsds sddeslyqpv
     3301 plkkytfklk eleddpkets kpkapekiek qkelghptsg kpnefdtgld spqndvvqng
     3361 snndqsvtec siattaefsh dtdateidsl dgydlqdedd gltesdskla gpavetkkdv
     3421 wttegilkqt drcfsqskle vieeegkvgp eedktpskgp ssdkagdksd kksgaqffsl
     3481 egrhpdrtvf pdsyfsykvd eefatpfktv atksldfdpw snnrgddevf etksrddeak
     3541 pfglavedrs qattpdttpa rtptdestpt sepnpfpfhe gkmfemtrsg aidmskrdfv
     3601 eerlqffqig ehtsegksgd kgegdkstvt aitqpqagds tvetnleipv ettavenkpg
     3661 tqasgdcmeq tlgsnsleks saavnaskvd pklrtpikmg isastmtlkk dgpgevtdki
     3721 eavmpsgegl enetvavias sassqtscrq tentdfpkdn fnnnnnldss avptdditcn
     3781 vvlkehlepk cslqkanqak stsgkgtgtt qghrvrdkqk phgeqqkste lvgargkskl
     3841 pvkassvkqv fsqnnlqsnt gskakeaskp dkakqnnssp clearsripv knthrsnlak
     3901 rtpalpkqeq vekekpkqlp sklpvkvrst svtmttvkvk knqlrevckh sieyfkgisg
     3961 etlklvdrls deekkmqsev sddeedstsr ntslseatqv ylpsitpksa rdmrteaasi
     4021 kskiekadse rrrskrtgpq spcertdirm aivadhlgls wtelarelnf svdeinqirv
     4081 enpnsliaqs fmllkkwvtr dgknattdal tsvltkinri divtllegpi fdygnisgtr
     4141 sfadennvfh dpidgwqpds ssvseaptsg rriggslldr ldessdqcrd svtsyvkgea
     4201 gkpetngsls estseaktks yiqealndvg khsdkealkt ksqisagtde qtlsstayqk
     4261 sleetskptt egsktsvpvs vkkmgwstse dgkprtgiqe eegavmseqk qgeaykvktk
     4321 kevrhvekks ys
//
LOCUS       XP_041331614            2026 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331614
VERSION     XP_041331614.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475680.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2026
                     /product="ankyrin-3 isoform X2"
                     /calculated_mol_wt=221597
     Region          1..288
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(56,58,62..63,66..68,70..71,75,78,87,89,91,95..96,
                     99..101,103..104,108,111,120,122,124,128..129,132..134,
                     136..137,141,144)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          56..87
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          89..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          122..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          174..453
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          188..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(217,219,223..224,227..229,231..232,236,239,248,250,
                     252,256..257,260..262,264..265,269,272,281,283,285,
                     289..290,293..295,297..298,302,305)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..281
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..308
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          316..347
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..618
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          352..380
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          382..413
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          415..446
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(448,450,454..455,458..460,462..463,467,470,479,481,
                     483,487..488,491..493,495..496,500,503,512,514,516,
                     520..521,524..526,528..529,533,536)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          448..479
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          481..512
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          514..543
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          534..799
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          547..576
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(580,582,586..587,590..592,594..595,599,602,611,613,
                     615,619..620,623..625,627..628,632,635,644,646,648,
                     652..653,656..658,660..661,665,668,677)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          580..611
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          613..644
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          646..677
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(679,681,685..686,689..691,693..694,698,701,710,712,
                     714,718..719,722..724,726..727,731,734,743,745,747,
                     751..752,755..757,759..760,764,767)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          679..710
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          712..743
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          745..773
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          969..1073
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1295..1424
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1462..1545
                     /region_name="Death_ank3"
                     /note="Death domain of Ankyrin-3; cd08803"
                     /db_xref="CDD:176781"
     Region          <1578..1920
                     /region_name="PLN03021"
                     /note="Low-temperature-induced protein; Provisional"
                     /db_xref="CDD:178593"
     CDS             1..2026
                     /gene="ANK3"
                     /coded_by="XM_041475680.1:779..6859"
                     /db_xref="GeneID:121357927"
ORIGIN      
        1 mseeakekna kpahrkkkgk ksdtnasylr aaragnleka ldylkngvdi nisnqnglna
       61 lhlaskeghv evvseliqrg asvdaatkkg ntalhiasla gqaevvkvlv tnranvnaqs
      121 qngftplyma aqenhlevvk flldngasqs latedgftpl avalqqghdq vvslllendt
      181 kgkvrlpalh iaarkddtka aalllqndhn advesksgft plhiaahygn invatlllnr
      241 gaavdftarn ditplhvask rgnanmvkll ldrgakidak trdgltplhc garsgheqvv
      301 emlldrgapi lsktknglsp lhmatqgdhl ncvqlliqhn vpvddvtndy ltalhvaahc
      361 ghykvakvll dkkanpnaka lngftplhia ckknrikvme lllkhgasiq avtesgltpi
      421 hvaafmghvn ivsqlmhhga spnttnvrge talhmaarag qtevvrylvq ngaqveakak
      481 ddqtplhisa rlgkadivqq llqqgaspna attsgytplh lsareghedv asvlldhgas
      541 lsiitkkgft plhvaakygk ievanlllqk naspdasgks gltplhvaah ydnqkvalll
      601 ldqgasphas akngytplhi aakknqmdia ttlleygada navtrqgiap lhlasqdghv
      661 dmvslllsrn anvnlsnksg ltplhlaaqe drvnvaevlv nqgaavdaqt kmgytplhvg
      721 chygnikivn fllqhsakvn aktkngytpl hqaaqqghth iinvllqhga apneltvngn
      781 talaiakrlg yisvvdtlkv vteetmttit vtekhkmnvp etmnevldms ddevrkanap
      841 eilsdaeyls dveegedamt gdtdkylgpq dlkelgddsl paegymgfsl garsaspkvs
      901 lrsfssdrsy tlnrssyard smmieellvp tkdqhltfqr efdsdslrhy swaadtldnv
      961 nlvsspihsg flvsfmvdar ggsmrgsrhh gmriiipprk ctaptritcr lvkrhklasp
     1021 ppmvegegla srlvemgpag aqflgpvive iphfgsmrgk erelivlrse ngetwkehqy
     1081 dskhedltei lngmdeelds veelekkric rivtkdfpqy favvsrikqe snqigpeggv
     1141 lssttvprvq asfpegaltk rirvglqaqp vpeeivkkil gnkatfspiv tveprrrkfh
     1201 kpitmtipvp ppsgegvsng ykgdttpslr llcsitggts paqweditgt tpltfsndcv
     1261 sfttnvsarf wladchqvle tvglatqlyr elicvpymak fvifakmndp vesnlrcfcm
     1321 tddkvdktle qqenfeevar skdievlegk piyvdcygnl apltkggqql vfnfyafken
     1381 rlpfsikvrd tsqepcgrls flkepkttkg lpqtavcnln itlpahkkte kadrrqnfvs
     1441 lalrkrysyl tepgmspqsp certdirmai vadhlglswt elarelnfsv deinqirven
     1501 pnsliaqsfm llkkwvtrdg knattdalts vltkinridi vtllegpifd ygnisgtrsf
     1561 adennvfhdp idgypsvqve letptglrfv ppsplhqddf lsdtsslesp lrtpsrlsdv
     1621 lvtsqghidg taaappvvte edtslddskv dfsvpregtp kdisvgesql eevdlkdfpr
     1681 ylgsyggisk dakqrqseet nkrgvrteqp ereksgtdee mtaekfkslf edihleegae
     1741 seemteervw silkgvqqae rkmssitgwq pdsssvseap tsgrriggsl ldrldessdq
     1801 crdsvtsyvk geagkpetng slsestseak tksyiqealn dvgkhsdkea lktksqisag
     1861 tdeqtlssta yqksleetsk pttegsktsv pvsvkkmgws tsedgkprtg iqeeegavms
     1921 eqkecsdsds eiesdsssge eqrittrvyr rrlilkgkea knipgesvte eqftdeegnv
     1981 itrkitrkvv rrvvipqerk vgemqgeayk vktkkevrhv ekksys
//
LOCUS       XP_041331621            1988 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041331621
VERSION     XP_041331621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1988
                     /product="ankyrin-3 isoform X3"
                     /calculated_mol_wt=217263
     Region          1..288
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(56,58,62..63,66..68,70..71,75,78,87,89,91,95..96,
                     99..101,103..104,108,111,120,122,124,128..129,132..134,
                     136..137,141,144)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          56..87
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          89..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          122..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          174..453
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          188..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(217,219,223..224,227..229,231..232,236,239,248,250,
                     252,256..257,260..262,264..265,269,272,281,283,285,
                     289..290,293..295,297..298,302,305)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..281
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..308
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          316..347
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..618
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          352..380
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          382..413
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          415..446
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(448,450,454..455,458..460,462..463,467,470,479,481,
                     483,487..488,491..493,495..496,500,503,512,514,516,
                     520..521,524..526,528..529,533,536)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          448..479
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          481..512
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          514..543
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          534..799
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          547..576
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(580,582,586..587,590..592,594..595,599,602,611,613,
                     615,619..620,623..625,627..628,632,635,644,646,648,
                     652..653,656..658,660..661,665,668,677)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          580..611
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          613..644
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          646..677
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(679,681,685..686,689..691,693..694,698,701,710,712,
                     714,718..719,722..724,726..727,731,734,743,745,747,
                     751..752,755..757,759..760,764,767)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          679..710
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          712..743
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          745..773
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          943..1047
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1269..1398
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1424..1507
                     /region_name="Death_ank3"
                     /note="Death domain of Ankyrin-3; cd08803"
                     /db_xref="CDD:176781"
     Region          <1540..1882
                     /region_name="PLN03021"
                     /note="Low-temperature-induced protein; Provisional"
                     /db_xref="CDD:178593"
     CDS             1..1988
                     /gene="ANK3"
                     /coded_by="XM_041475687.1:778..6744"
                     /db_xref="GeneID:121357927"
ORIGIN      
        1 mseeakekna kpahrkkkgk ksdtnasylr aaragnleka ldylkngvdi nisnqnglna
       61 lhlaskeghv evvseliqrg asvdaatkkg ntalhiasla gqaevvkvlv tnranvnaqs
      121 qngftplyma aqenhlevvk flldngasqs latedgftpl avalqqghdq vvslllendt
      181 kgkvrlpalh iaarkddtka aalllqndhn advesksgft plhiaahygn invatlllnr
      241 gaavdftarn ditplhvask rgnanmvkll ldrgakidak trdgltplhc garsgheqvv
      301 emlldrgapi lsktknglsp lhmatqgdhl ncvqlliqhn vpvddvtndy ltalhvaahc
      361 ghykvakvll dkkanpnaka lngftplhia ckknrikvme lllkhgasiq avtesgltpi
      421 hvaafmghvn ivsqlmhhga spnttnvrge talhmaarag qtevvrylvq ngaqveakak
      481 ddqtplhisa rlgkadivqq llqqgaspna attsgytplh lsareghedv asvlldhgas
      541 lsiitkkgft plhvaakygk ievanlllqk naspdasgks gltplhvaah ydnqkvalll
      601 ldqgasphas akngytplhi aakknqmdia ttlleygada navtrqgiap lhlasqdghv
      661 dmvslllsrn anvnlsnksg ltplhlaaqe drvnvaevlv nqgaavdaqt kmgytplhvg
      721 chygnikivn fllqhsakvn aktkngytpl hqaaqqghth iinvllqhga apneltvngn
      781 talaiakrlg yisvvdtlkv vteetmttit vtekhkmnvp etmnevldms ddegedamtg
      841 dtdkylgpqd lkelgddslp aegymgfslg arsaspkvss drsytlnrss yardsmmiee
      901 llvptkdqhl tfqrefdsds lrhyswaadt ldnvnlvssp ihsgflvsfm vdarggsmrg
      961 srhhgmriii pprkctaptr itcrlvkrhk laspppmveg eglasrlvem gpagaqflgp
     1021 viveiphfgs mrgkereliv lrsengetwk ehqydskhed lteilngmde eldsveelek
     1081 kricrivtkd fpqyfavvsr ikqesnqigp eggvlssttv prvqasfpeg altkrirvgl
     1141 qaqpvpeeiv kkilgnkatf spivtveprr rkfhkpitmt ipvpppsgeg vsngykgdtt
     1201 pslrllcsit ggtspaqwed itgttpltfs ndcvsfttnv sarfwladch qvletvglat
     1261 qlyrelicvp ymakfvifak mndpvesnlr cfcmtddkvd ktleqqenfe evarskdiev
     1321 legkpiyvdc ygnlapltkg gqqlvfnfya fkenrlpfsi kvrdtsqepc grlsflkepk
     1381 ttkglpqtav cnlnitlpah kktekadrrq nfvslalrpq spcertdirm aivadhlgls
     1441 wtelarelnf svdeinqirv enpnsliaqs fmllkkwvtr dgknattdal tsvltkinri
     1501 divtllegpi fdygnisgtr sfadennvfh dpidgypsvq veletptglr fvppsplhqd
     1561 dflsdtssle splrtpsrls dvlvtsqghi dgtaaappvv teedtsldds kvdfsvpreg
     1621 tpkdisvges qleevdlkdf prylgsyggi skdakqrqse etnkrgvrte qpereksgtd
     1681 eemtaekfks lfedihleeg aeseemteer vwsilkgvqq aerkmssitg wqpdsssvse
     1741 aptsgrrigg slldrldess dqcrdsvtsy vkgeagkpet ngslsestse aktksyiqea
     1801 lndvgkhsdk ealktksqis agtdeqtlss tayqksleet skpttegskt svpvsvkkmg
     1861 wstsedgkpr tgiqeeegav mseqkecsds dseiesdsss geeqrittrv yrrrlilkgk
     1921 eaknipgesv teeqftdeeg nvitrkitrk vvrrvvipqe rkvgemqgea ykvktkkevr
     1981 hvekksys
//
LOCUS       XP_041331631            1945 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041331631
VERSION     XP_041331631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1945
                     /product="ankyrin-3 isoform X4"
                     /calculated_mol_wt=212305
     Region          1..288
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(56,58,62..63,66..68,70..71,75,78,87,89,91,95..96,
                     99..101,103..104,108,111,120,122,124,128..129,132..134,
                     136..137,141,144)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          56..87
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          89..120
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          122..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          174..453
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          188..215
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(217,219,223..224,227..229,231..232,236,239,248,250,
                     252,256..257,260..262,264..265,269,272,281,283,285,
                     289..290,293..295,297..298,302,305)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          217..248
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          250..281
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          283..308
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          316..347
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..618
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          352..380
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          382..413
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          415..446
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(448,450,454..455,458..460,462..463,467,470,479,481,
                     483,487..488,491..493,495..496,500,503,512,514,516,
                     520..521,524..526,528..529,533,536)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          448..479
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          481..512
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          514..543
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          534..799
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          547..576
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(580,582,586..587,590..592,594..595,599,602,611,613,
                     615,619..620,623..625,627..628,632,635,644,646,648,
                     652..653,656..658,660..661,665,668,677)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          580..611
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          613..644
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          646..677
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(679,681,685..686,689..691,693..694,698,701,710,712,
                     714,718..719,722..724,726..727,731,734,743,745,747,
                     751..752,755..757,759..760,764,767)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          679..710
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          712..743
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          745..773
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          969..1073
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1295..1424
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1462..1545
                     /region_name="Death_ank3"
                     /note="Death domain of Ankyrin-3; cd08803"
                     /db_xref="CDD:176781"
     Region          <1578..1920
                     /region_name="PLN03021"
                     /note="Low-temperature-induced protein; Provisional"
                     /db_xref="CDD:178593"
     CDS             1..1945
                     /gene="ANK3"
                     /coded_by="XM_041475697.1:781..6618"
                     /db_xref="GeneID:121357927"
ORIGIN      
        1 mseeakekna kpahrkkkgk ksdtnasylr aaragnleka ldylkngvdi nisnqnglna
       61 lhlaskeghv evvseliqrg asvdaatkkg ntalhiasla gqaevvkvlv tnranvnaqs
      121 qngftplyma aqenhlevvk flldngasqs latedgftpl avalqqghdq vvslllendt
      181 kgkvrlpalh iaarkddtka aalllqndhn advesksgft plhiaahygn invatlllnr
      241 gaavdftarn ditplhvask rgnanmvkll ldrgakidak trdgltplhc garsgheqvv
      301 emlldrgapi lsktknglsp lhmatqgdhl ncvqlliqhn vpvddvtndy ltalhvaahc
      361 ghykvakvll dkkanpnaka lngftplhia ckknrikvme lllkhgasiq avtesgltpi
      421 hvaafmghvn ivsqlmhhga spnttnvrge talhmaarag qtevvrylvq ngaqveakak
      481 ddqtplhisa rlgkadivqq llqqgaspna attsgytplh lsareghedv asvlldhgas
      541 lsiitkkgft plhvaakygk ievanlllqk naspdasgks gltplhvaah ydnqkvalll
      601 ldqgasphas akngytplhi aakknqmdia ttlleygada navtrqgiap lhlasqdghv
      661 dmvslllsrn anvnlsnksg ltplhlaaqe drvnvaevlv nqgaavdaqt kmgytplhvg
      721 chygnikivn fllqhsakvn aktkngytpl hqaaqqghth iinvllqhga apneltvngn
      781 talaiakrlg yisvvdtlkv vteetmttit vtekhkmnvp etmnevldms ddevrkanap
      841 eilsdaeyls dveegedamt gdtdkylgpq dlkelgddsl paegymgfsl garsaspkvs
      901 lrsfssdrsy tlnrssyard smmieellvp tkdqhltfqr efdsdslrhy swaadtldnv
      961 nlvsspihsg flvsfmvdar ggsmrgsrhh gmriiipprk ctaptritcr lvkrhklasp
     1021 ppmvegegla srlvemgpag aqflgpvive iphfgsmrgk erelivlrse ngetwkehqy
     1081 dskhedltei lngmdeelds veelekkric rivtkdfpqy favvsrikqe snqigpeggv
     1141 lssttvprvq asfpegaltk rirvglqaqp vpeeivkkil gnkatfspiv tveprrrkfh
     1201 kpitmtipvp ppsgegvsng ykgdttpslr llcsitggts paqweditgt tpltfsndcv
     1261 sfttnvsarf wladchqvle tvglatqlyr elicvpymak fvifakmndp vesnlrcfcm
     1321 tddkvdktle qqenfeevar skdievlegk piyvdcygnl apltkggqql vfnfyafken
     1381 rlpfsikvrd tsqepcgrls flkepkttkg lpqtavcnln itlpahkkte kadrrqnfvs
     1441 lalrkrysyl tepgmspqsp certdirmai vadhlglswt elarelnfsv deinqirven
     1501 pnsliaqsfm llkkwvtrdg knattdalts vltkinridi vtllegpifd ygnisgtrsf
     1561 adennvfhdp idgypsvqve letptglrfv ppsplhqddf lsdtsslesp lrtpsrlsdv
     1621 lvtsqghidg taaappvvte edtslddskv dfsvpregtp kdisvgesql eevdlkdfpr
     1681 ylgsyggisk dakqrqseet nkrgvrteqp ereksgtdee mtaekfkslf edihleegae
     1741 seemteervw silkgvqqae rkmssitgwq pdsssvseap tsgrriggsl ldrldessdq
     1801 crdsvtsyvk geagkpetng slsestseak tksyiqealn dvgkhsdkea lktksqisag
     1861 tdeqtlssta yqksleetsk pttegsktsv pvsvkkmgws tsedgkprtg iqeeegavms
     1921 eqkqgeaykv ktkkevrhve kksys
//
LOCUS       XP_041331643            1366 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331643
VERSION     XP_041331643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1366
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X1"
                     /calculated_mol_wt=152891
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <329..489
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1366
                     /gene="KCNMA1"
                     /coded_by="XM_041475709.1:147..4247"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrlatrrak hmesmpdveg myalpnilek ncsrtvypce
      721 nvtfellpkp msllkvknaa rssypkcsyq fknattnali dakstegile pvplvnnrkg
      781 slflpnnpsl lhlnllssve qgkstycrlq ralslpvkyr yhsqkpglnq dlledeqpst
      841 lspkkkqrng gmrnspnssp klmrhdplli pgneqidnmd anvkkydstg mfhwcpakdi
      901 ekviltrsea amtvlsghvv vcifgdvksa liglrnlvmp lrasnfhyhe lkhivfvgsl
      961 eylrrewetl hnfpkvsilp gtplsradlr avninlcdmc vilsanqnni ddaslqdkec
     1021 ilaslniksm qfddsigvlq ansqgftppg mdrtspdnsp vhgllrqpsi ttganipiit
     1081 elvndsnvqf ldqdddddpd telyltqpfa cgtafavsvl dslmsatyfn dniltlirtl
     1141 vtggatpele aliaeenalr ggystpqtla nrdrcrvaql alydgpfadl gdggcygdlf
     1201 ckalktynml cfgiyrlrda hlstpsqctk ryvitnppye felvptdlif clmqfdhnag
     1261 qsraslshss hssyssskks ssvhsipsta nrpnrtksrd srdkqnatrm nrmgqaekkw
     1321 ftdepdnayp rniqikpmst hmanqinqyk stsslippir evedec
//
LOCUS       XP_041331651            1366 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331651
VERSION     XP_041331651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475717.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1366
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X1"
                     /calculated_mol_wt=152891
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <329..489
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1366
                     /gene="KCNMA1"
                     /coded_by="XM_041475717.1:154..4254"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrlatrrak hmesmpdveg myalpnilek ncsrtvypce
      721 nvtfellpkp msllkvknaa rssypkcsyq fknattnali dakstegile pvplvnnrkg
      781 slflpnnpsl lhlnllssve qgkstycrlq ralslpvkyr yhsqkpglnq dlledeqpst
      841 lspkkkqrng gmrnspnssp klmrhdplli pgneqidnmd anvkkydstg mfhwcpakdi
      901 ekviltrsea amtvlsghvv vcifgdvksa liglrnlvmp lrasnfhyhe lkhivfvgsl
      961 eylrrewetl hnfpkvsilp gtplsradlr avninlcdmc vilsanqnni ddaslqdkec
     1021 ilaslniksm qfddsigvlq ansqgftppg mdrtspdnsp vhgllrqpsi ttganipiit
     1081 elvndsnvqf ldqdddddpd telyltqpfa cgtafavsvl dslmsatyfn dniltlirtl
     1141 vtggatpele aliaeenalr ggystpqtla nrdrcrvaql alydgpfadl gdggcygdlf
     1201 ckalktynml cfgiyrlrda hlstpsqctk ryvitnppye felvptdlif clmqfdhnag
     1261 qsraslshss hssyssskks ssvhsipsta nrpnrtksrd srdkqnatrm nrmgqaekkw
     1321 ftdepdnayp rniqikpmst hmanqinqyk stsslippir evedec
//
LOCUS       XP_041331659            1365 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331659
VERSION     XP_041331659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1365
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X2"
                     /calculated_mol_wt=152820
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <329..489
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1365
                     /gene="KCNMA1"
                     /coded_by="XM_041475725.1:147..4244"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrlatrrak hmesmpdveg myalpnilek ncsrtvypce
      721 nvtfellpkp msllkvknaa rssypkcsyq fknattnali dakstegile pvplvnnrkg
      781 slflpnnpsl lhlnllssve qgkstycrlq ralslpvkyr yhsqkpglnq dlledeqpst
      841 lspkkkqrng gmrnspnssp klmrhdplli pgneqidnmd anvkkydstg mfhwcpakdi
      901 ekviltrsea amtvlsghvv vcifgdvksa liglrnlvmp lrasnfhyhe lkhivfvgsl
      961 eylrrewetl hnfpkvsilp gtplsradlr avninlcdmc vilsanqnni ddaslqdkec
     1021 ilaslniksm qfddsigvlq ansqgftppg mdrtspdnsp vhgllrqpsi ttganipiit
     1081 elvndsnvqf ldqdddddpd telyltqpfa cgtafavsvl dslmsatyfn dniltlirtl
     1141 vtggatpele aliaeenalr ggystpqtla nrdrcrvaql alydgpfadl gdggcygdlf
     1201 ckalktynml cfgiyrlrda hlstpsqctk ryvitnppye felvptdlif clmqfdhnag
     1261 qsraslshss hssyssskks ssvhsipsta nrpnrtksrd srdkqnatrm nrmgqekkwf
     1321 tdepdnaypr niqikpmsth manqinqyks tsslippire vedec
//
LOCUS       XP_041331668            1358 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331668
VERSION     XP_041331668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1358
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X3"
                     /calculated_mol_wt=152033
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <321..481
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1358
                     /gene="KCNMA1"
                     /coded_by="XM_041475734.1:147..4223"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrlatrr akhmesmpdv egmyalpnil ekncsrtvyp cenvtfellp
      721 kpmsllkvkn aarssypkcs yqfknattna lidakstegi lepvplvnnr kgslflpnnp
      781 sllhlnllss veqgkstycr lqralslpvk yryhsqkpgl nqdlledeqp stlspkkkqr
      841 nggmrnspns spklmrhdpl lipgneqidn mdanvkkyds tgmfhwcpak diekviltrs
      901 eaamtvlsgh vvvcifgdvk saliglrnlv mplrasnfhy helkhivfvg sleylrrewe
      961 tlhnfpkvsi lpgtplsrad lravninlcd mcvilsanqn niddaslqdk ecilaslnik
     1021 smqfddsigv lqansqgftp pgmdrtspdn spvhgllrqp sittganipi itelvndsnv
     1081 qfldqddddd pdtelyltqp facgtafavs vldslmsaty fndniltlir tlvtggatpe
     1141 lealiaeena lrggystpqt lanrdrcrva qlalydgpfa dlgdggcygd lfckalktyn
     1201 mlcfgiyrlr dahlstpsqc tkryvitnpp yefelvptdl ifclmqfdhn agqsraslsh
     1261 sshssysssk ksssvhsips tanrpnrtks rdsrdkqnat rmnrmgqaek kwftdepdna
     1321 yprniqikpm sthmanqinq ykstsslipp irevedec
//
LOCUS       XP_041331674            1324 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331674
VERSION     XP_041331674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1324
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X4"
                     /calculated_mol_wt=148769
     Region          115..340
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <287..447
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          490..577
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1324
                     /gene="KCNMA1"
                     /coded_by="XM_041475740.1:164..4138"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mdaliipvtm evpcdsrgqr mwwaflassm vtffgglfii llwrtlkylw tvcchcgvkn
       61 keaqkinggg dtqadgackp tdekeenvaa evgwmtsvkd wagvmisaqt ltgrvlvvlv
      121 falsigalvi yfidssksrt adslipiesc qnfykdftlq idmafnvffl lyfglrfiaa
      181 ndklwfwlev nsvvdfftvp pvfvsvylnr swlglrflra lrliqfseil qflnilktsn
      241 siklvnlcsi fistwltaag fihlvensgd pwenfqnnqp ltywecvyll mvtmstvgyg
      301 dvyakttlgr lfmvffilgg lamfasyvpe iielignrkk yggsysavsg rkhivvcghi
      361 tlesvsnflk dflhkdrddv nveivflhni spnlelealf krhftqvefy qgsvlnphdl
      421 arvkiesada clilankyca dpdaedasni mrvisiknyh pkiriitqml qyhnkahlln
      481 ipswnwkegd daiclaelkl gfiaqsclap glstmlanlf smrsfikiee dtwqkyyleg
      541 vanemyteyl ssafvglsfp avcelvfakl kllmiaieyk sekressili npgnhvkiqe
      601 gtlgffiasd akevkrayfy ckachdditd pkrikkcgck rlatrrakhm esmpdvegmy
      661 alpnileknc srtvypcenv tfellpkpms llkvknaars sypkcsyqfk nattnalida
      721 kstegilepv plvnnrkgsl flpnnpsllh lnllssveqg kstycrlqra lslpvkyryh
      781 sqkpglnqdl ledeqpstls pkkkqrnggm rnspnsspkl mrhdpllipg neqidnmdan
      841 vkkydstgmf hwcpakdiek viltrseaam tvlsghvvvc ifgdvksali glrnlvmplr
      901 asnfhyhelk hivfvgsley lrrewetlhn fpkvsilpgt plsradlrav ninlcdmcvi
      961 lsanqnnidd aslqdkecil aslniksmqf ddsigvlqan sqgftppgmd rtspdnspvh
     1021 gllrqpsitt ganipiitel vndsnvqfld qdddddpdte lyltqpfacg tafavsvlds
     1081 lmsatyfndn iltlirtlvt ggatpeleal iaeenalrgg ystpqtlanr drcrvaqlal
     1141 ydgpfadlgd ggcygdlfck alktynmlcf giyrlrdahl stpsqctkry vitnppyefe
     1201 lvptdlifcl mqfdhnagqs raslshsshs syssskksss vhsipstanr pnrtksrdsr
     1261 dkqnatrmnr mgqaekkwft depdnayprn iqikpmsthm anqinqykst sslippirev
     1321 edec
//
LOCUS       XP_041331685            1324 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331685
VERSION     XP_041331685.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475751.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1324
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X4"
                     /calculated_mol_wt=148769
     Region          115..340
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <287..447
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          490..577
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1324
                     /gene="KCNMA1"
                     /coded_by="XM_041475751.1:134..4108"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mdaliipvtm evpcdsrgqr mwwaflassm vtffgglfii llwrtlkylw tvcchcgvkn
       61 keaqkinggg dtqadgackp tdekeenvaa evgwmtsvkd wagvmisaqt ltgrvlvvlv
      121 falsigalvi yfidssksrt adslipiesc qnfykdftlq idmafnvffl lyfglrfiaa
      181 ndklwfwlev nsvvdfftvp pvfvsvylnr swlglrflra lrliqfseil qflnilktsn
      241 siklvnlcsi fistwltaag fihlvensgd pwenfqnnqp ltywecvyll mvtmstvgyg
      301 dvyakttlgr lfmvffilgg lamfasyvpe iielignrkk yggsysavsg rkhivvcghi
      361 tlesvsnflk dflhkdrddv nveivflhni spnlelealf krhftqvefy qgsvlnphdl
      421 arvkiesada clilankyca dpdaedasni mrvisiknyh pkiriitqml qyhnkahlln
      481 ipswnwkegd daiclaelkl gfiaqsclap glstmlanlf smrsfikiee dtwqkyyleg
      541 vanemyteyl ssafvglsfp avcelvfakl kllmiaieyk sekressili npgnhvkiqe
      601 gtlgffiasd akevkrayfy ckachdditd pkrikkcgck rlatrrakhm esmpdvegmy
      661 alpnileknc srtvypcenv tfellpkpms llkvknaars sypkcsyqfk nattnalida
      721 kstegilepv plvnnrkgsl flpnnpsllh lnllssveqg kstycrlqra lslpvkyryh
      781 sqkpglnqdl ledeqpstls pkkkqrnggm rnspnsspkl mrhdpllipg neqidnmdan
      841 vkkydstgmf hwcpakdiek viltrseaam tvlsghvvvc ifgdvksali glrnlvmplr
      901 asnfhyhelk hivfvgsley lrrewetlhn fpkvsilpgt plsradlrav ninlcdmcvi
      961 lsanqnnidd aslqdkecil aslniksmqf ddsigvlqan sqgftppgmd rtspdnspvh
     1021 gllrqpsitt ganipiitel vndsnvqfld qdddddpdte lyltqpfacg tafavsvlds
     1081 lmsatyfndn iltlirtlvt ggatpeleal iaeenalrgg ystpqtlanr drcrvaqlal
     1141 ydgpfadlgd ggcygdlfck alktynmlcf giyrlrdahl stpsqctkry vitnppyefe
     1201 lvptdlifcl mqfdhnagqs raslshsshs syssskksss vhsipstanr pnrtksrdsr
     1261 dkqnatrmnr mgqaekkwft depdnayprn iqikpmsthm anqinqykst sslippirev
     1321 edec
//
LOCUS       XP_041331694            1315 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331694
VERSION     XP_041331694.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475760.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1315
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X5"
                     /calculated_mol_wt=147071
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <329..489
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1315
                     /gene="KCNMA1"
                     /coded_by="XM_041475760.1:147..4094"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrqvknaar ssypkcsyqf knattnalid akstegilep
      721 vplvnnrkgs lflpnnpsll hlnllssveq gkstycrlqr alslpvkyry hsqkpglnqd
      781 lledeqpstl spkkkqrngg mrnspnsspk lmrhdpllip gneqidnmda nvkkydstgm
      841 fhwcpakdie kviltrseaa mtvlsghvvv cifgdvksal iglrnlvmpl rasnfhyhel
      901 khivfvgsle ylrrewetlh nfpkvsilpg tplsradlra vninlcdmcv ilsanqnnid
      961 daslqdkeci laslniksmq fddsigvlqa nsqgftppgm drtspdnspv hgllrqpsit
     1021 tganipiite lvndsnvqfl dqdddddpdt elyltqpfac gtafavsvld slmsatyfnd
     1081 niltlirtlv tggatpelea liaeenalrg gystpqtlan rdrcrvaqla lydgpfadlg
     1141 dggcygdlfc kalktynmlc fgiyrlrdah lstpsqctkr yvitnppyef elvptdlifc
     1201 lmqfdhnagq sraslshssh ssyssskkss svhsipstan rpnrtksrds rdkqnatrmn
     1261 rmgqaekkwf tdepdnaypr niqikpmsth manqinqyks tsslippire vedec
//
LOCUS       XP_041331702            1313 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331702
VERSION     XP_041331702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1313
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X6"
                     /calculated_mol_wt=146861
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          329..643
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1313
                     /gene="KCNMA1"
                     /coded_by="XM_041475768.1:147..4088"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrlatrrak hmesmpdveg myalpnilek ncsrtvypce
      721 nvtfellpkp msllkvknaa rssypkcsyq fknattnali dakstegile pvplvnnrkg
      781 slflpnnpsl lhlnllssve qgkstycrlq ralslpvkyr yhsqkpglnq dlledeqpst
      841 lspkkkqrng gmrnspnssp klmrhdplli pgneqidnmd anvkkydstg mfhwcpakdi
      901 ekviltrsea amtvlsghvv vcifgdvksa liglrnlvmp lrasnfhyhe lkhivfvgsl
      961 eylrrewetl hnfpkvsilp gtplsradlr avninlcdmc vilsanqnni ddaslqdkec
     1021 ilaslniksm qfddsigvlq ansqgftppg mdrtspdnsp vhgllrqpsi ttganipiit
     1081 elvndsnvqf ldqdddddpd telyltqpfa cgtafavsvl dslmsatyfn dniltlirtl
     1141 vtggatpele aliaeenalr ggystpqtla nrdrcrvaql alydgpfadl gdggcygdlf
     1201 ckalktynml cfgiyrlrda hlstpsqctk ryvitnppye felvptdlif clmqfdhnag
     1261 qsraslshss hssyssskks ssvhsipsta nrpnrtksrd srdkqnrkem vyr
//
LOCUS       XP_041331711            1312 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331711
VERSION     XP_041331711.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475777.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1312
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X7"
                     /calculated_mol_wt=146719
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          329..643
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1312
                     /gene="KCNMA1"
                     /coded_by="XM_041475777.1:147..4085"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrlatrrak hmesmpdveg myalpnilek ncsrtvypce
      721 nvtfellpkp msllkvknaa rssypkcsyq fknattnali dakstegile pvplvnnrkg
      781 slflpnnpsl lhlnllssve qgkstycrlq ralslpvkyr yhsqkpglnq dlledeqpst
      841 lspkkkqrng gmrnspnssp klmrhdplli pgneqidnmd anvkkydstg mfhwcpakdi
      901 ekviltrsea amtvlsghvv vcifgdvksa liglrnlvmp lrasnfhyhe lkhivfvgsl
      961 eylrrewetl hnfpkvsilp gtplsradlr avninlcdmc vilsanqnni ddaslqdkec
     1021 ilaslniksm qfddsigvlq ansqgftppg mdrtspdnsp vhgllrqpsi ttganipiit
     1081 elvndsnvqf ldqdddddpd telyltqpfa cgtafavsvl dslmsatyfn dniltlirtl
     1141 vtggatpele aliaeenalr ggystpqtla nrdrcrvaql alydgpfadl gdggcygdlf
     1201 ckalktynml cfgiyrlrda hlstpsqctk ryvitnppye felvptdlif clmqfdhnag
     1261 qsraslshss hssyssskks ssvhsipsta nrpnrtksrd srdkqkkemv yr
//
LOCUS       XP_041331723            1268 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331723
VERSION     XP_041331723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1268
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X8"
                     /calculated_mol_wt=141965
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          329..643
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1268
                     /gene="KCNMA1"
                     /coded_by="XM_041475789.1:147..3953"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrlatrrak hmesmpdveg myalpnilek ncsrtvypce
      721 nvtfellpkp mslliedeqp stlspkkkqr nggmrnspns spklmrhdpl lipgneqidn
      781 mdanvkkyds tgmfhwcpak diekviltrs eaamtvlsgh vvvcifgdvk saliglrnlv
      841 mplrasnfhy helkhivfvg sleylrrewe tlhnfpkvsi lpgtplsrad lravninlcd
      901 mcvilsanqn niddaslqdk ecilaslnik smqfddsigv lqansqgftp pgmdrtspdn
      961 spvhgllrqp sittganipi itelvndsnv qfldqddddd pdtelyltqp facgtafavs
     1021 vldslmsaty fndniltlir tlvtggatpe lealiaeena lrggystpqt lanrdrcrva
     1081 qlalydgpfa dlgdggcygd lfckalktyn mlcfgiyrlr dahlstpsqc tkryvitnpp
     1141 yefelvptdl ifclmqfdhn agqsraslsh sshssysssk ksssvhsips tanrpnrtks
     1201 rdsrdkqnat rmnrmgqaek kwftdepdna yprniqikpm sthmanqinq ykstsslipp
     1261 irevedec
//
LOCUS       XP_041331732            1217 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331732
VERSION     XP_041331732.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475798.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1217
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X9"
                     /calculated_mol_wt=136144
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          329..643
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1217
                     /gene="KCNMA1"
                     /coded_by="XM_041475798.1:147..3800"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrledeqps tlspkkkqrn ggmrnspnss pklmrhdpll
      721 ipgneqidnm danvkkydst gmfhwcpakd iekviltrse aamtvlsghv vvcifgdvks
      781 aliglrnlvm plrasnfhyh elkhivfvgs leylrrewet lhnfpkvsil pgtplsradl
      841 ravninlcdm cvilsanqnn iddaslqdke cilaslniks mqfddsigvl qansqgftpp
      901 gmdrtspdns pvhgllrqps ittganipii telvndsnvq fldqdddddp dtelyltqpf
      961 acgtafavsv ldslmsatyf ndniltlirt lvtggatpel ealiaeenal rggystpqtl
     1021 anrdrcrvaq lalydgpfad lgdggcygdl fckalktynm lcfgiyrlrd ahlstpsqct
     1081 kryvitnppy efelvptdli fclmqfdhna gqsraslshs shssyssskk sssvhsipst
     1141 anrpnrtksr dsrdkqnatr mnrmgqaekk wftdepdnay prniqikpms thmanqinqy
     1201 kstsslippi revedec
//
LOCUS       XP_041331742            1216 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331742
VERSION     XP_041331742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1216
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X10"
                     /calculated_mol_wt=136073
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          329..643
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1216
                     /gene="KCNMA1"
                     /coded_by="XM_041475808.1:147..3797"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrledeqps tlspkkkqrn ggmrnspnss pklmrhdpll
      721 ipgneqidnm danvkkydst gmfhwcpakd iekviltrse aamtvlsghv vvcifgdvks
      781 aliglrnlvm plrasnfhyh elkhivfvgs leylrrewet lhnfpkvsil pgtplsradl
      841 ravninlcdm cvilsanqnn iddaslqdke cilaslniks mqfddsigvl qansqgftpp
      901 gmdrtspdns pvhgllrqps ittganipii telvndsnvq fldqdddddp dtelyltqpf
      961 acgtafavsv ldslmsatyf ndniltlirt lvtggatpel ealiaeenal rggystpqtl
     1021 anrdrcrvaq lalydgpfad lgdggcygdl fckalktynm lcfgiyrlrd ahlstpsqct
     1081 kryvitnppy efelvptdli fclmqfdhna gqsraslshs shssyssskk sssvhsipst
     1141 anrpnrtksr dsrdkqnatr mnrmgqekkw ftdepdnayp rniqikpmst hmanqinqyk
     1201 stsslippir evedec
//
LOCUS       XP_041331750            1209 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331750
VERSION     XP_041331750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1209
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X11"
                     /calculated_mol_wt=135286
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          321..635
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1209
                     /gene="KCNMA1"
                     /coded_by="XM_041475816.1:147..3776"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrledeq pstlspkkkq rnggmrnspn sspklmrhdp llipgneqid
      721 nmdanvkkyd stgmfhwcpa kdiekviltr seaamtvlsg hvvvcifgdv ksaliglrnl
      781 vmplrasnfh yhelkhivfv gsleylrrew etlhnfpkvs ilpgtplsra dlravninlc
      841 dmcvilsanq nniddaslqd kecilaslni ksmqfddsig vlqansqgft ppgmdrtspd
      901 nspvhgllrq psittganip iitelvndsn vqfldqdddd dpdtelyltq pfacgtafav
      961 svldslmsat yfndniltli rtlvtggatp elealiaeen alrggystpq tlanrdrcrv
     1021 aqlalydgpf adlgdggcyg dlfckalkty nmlcfgiyrl rdahlstpsq ctkryvitnp
     1081 pyefelvptd lifclmqfdh nagqsrasls hsshssysss kksssvhsip stanrpnrtk
     1141 srdsrdkqna trmnrmgqae kkwftdepdn ayprniqikp msthmanqin qykstsslip
     1201 pirevedec
//
LOCUS       XP_041331757            1208 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X12
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331757
VERSION     XP_041331757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1208
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X12"
                     /calculated_mol_wt=135215
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          321..635
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1208
                     /gene="KCNMA1"
                     /coded_by="XM_041475823.1:147..3773"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrledeq pstlspkkkq rnggmrnspn sspklmrhdp llipgneqid
      721 nmdanvkkyd stgmfhwcpa kdiekviltr seaamtvlsg hvvvcifgdv ksaliglrnl
      781 vmplrasnfh yhelkhivfv gsleylrrew etlhnfpkvs ilpgtplsra dlravninlc
      841 dmcvilsanq nniddaslqd kecilaslni ksmqfddsig vlqansqgft ppgmdrtspd
      901 nspvhgllrq psittganip iitelvndsn vqfldqdddd dpdtelyltq pfacgtafav
      961 svldslmsat yfndniltli rtlvtggatp elealiaeen alrggystpq tlanrdrcrv
     1021 aqlalydgpf adlgdggcyg dlfckalkty nmlcfgiyrl rdahlstpsq ctkryvitnp
     1081 pyefelvptd lifclmqfdh nagqsrasls hsshssysss kksssvhsip stanrpnrtk
     1141 srdsrdkqna trmnrmgqek kwftdepdna yprniqikpm sthmanqinq ykstsslipp
     1201 irevedec
//
LOCUS       XP_041331761            1164 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X13
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331761
VERSION     XP_041331761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1164
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X13"
                     /calculated_mol_wt=130113
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          329..643
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1164
                     /gene="KCNMA1"
                     /coded_by="XM_041475827.1:147..3641"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrledeqps tlspkkkqrn ggmrnspnss pklmrhdpll
      721 ipgneqidnm danvkkydst gmfhwcpakd iekviltrse aamtvlsghv vvcifgdvks
      781 aliglrnlvm plrasnfhyh elkhivfvgs leylrrewet lhnfpkvsil pgtplsradl
      841 ravninlcdm cvilsanqnn iddaslqdke cilaslniks mqfddsigvl qansqgftpp
      901 gmdrtspdns pvhgllrqps ittganipii telvndsnvq fldqdddddp dtelyltqpf
      961 acgtafavsv ldslmsatyf ndniltlirt lvtggatpel ealiaeenal rggystpqtl
     1021 anrdrcrvaq lalydgpfad lgdggcygdl fckalktynm lcfgiyrlrd ahlstpsqct
     1081 kryvitnppy efelvptdli fclmqfdhna gqsraslshs shssyssskk sssvhsipst
     1141 anrpnrtksr dsrdkqnrke mvyr
//
LOCUS       XP_041331769            1163 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X14
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331769
VERSION     XP_041331769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1163
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X14"
                     /calculated_mol_wt=129971
     Region          157..382
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          329..643
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          532..619
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1163
                     /gene="KCNMA1"
                     /coded_by="XM_041475835.1:147..3638"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssks
      181 rtadslipie scqnfykdft lqidmafnvf fllyfglrfi aandklwfwl evnsvvdfft
      241 vppvfvsvyl nrswlglrfl ralrliqfse ilqflnilkt snsiklvnlc sifistwlta
      301 agfihlvens gdpwenfqnn qpltywecvy llmvtmstvg ygdvyakttl grlfmvffil
      361 gglamfasyv peiielignr kkyggsysav sgrkhivvcg hitlesvsnf lkdflhkdrd
      421 dvnveivflh nispnlelea lfkrhftqve fyqgsvlnph dlarvkiesa daclilanky
      481 cadpdaedas nimrvisikn yhpkiriitq mlqyhnkahl lnipswnwke gddaiclael
      541 klgfiaqscl apglstmlan lfsmrsfiki eedtwqkyyl egvanemyte ylssafvgls
      601 fpavcelvfa klkllmiaie yksekressi linpgnhvki qegtlgffia sdakevkray
      661 fyckachddi tdpkrikkcg ckrledeqps tlspkkkqrn ggmrnspnss pklmrhdpll
      721 ipgneqidnm danvkkydst gmfhwcpakd iekviltrse aamtvlsghv vvcifgdvks
      781 aliglrnlvm plrasnfhyh elkhivfvgs leylrrewet lhnfpkvsil pgtplsradl
      841 ravninlcdm cvilsanqnn iddaslqdke cilaslniks mqfddsigvl qansqgftpp
      901 gmdrtspdns pvhgllrqps ittganipii telvndsnvq fldqdddddp dtelyltqpf
      961 acgtafavsv ldslmsatyf ndniltlirt lvtggatpel ealiaeenal rggystpqtl
     1021 anrdrcrvaq lalydgpfad lgdggcygdl fckalktynm lcfgiyrlrd ahlstpsqct
     1081 kryvitnppy efelvptdli fclmqfdhna gqsraslshs shssyssskk sssvhsipst
     1141 anrpnrtksr dsrdkqkkem vyr
//
LOCUS       XP_041331777            1155 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X15
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331777
VERSION     XP_041331777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1155
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X15"
                     /calculated_mol_wt=129113
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          321..635
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1155
                     /gene="KCNMA1"
                     /coded_by="XM_041475843.1:147..3614"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrledeq pstlspkkkq rnggmrnspn sspklmrhdp llipgneqid
      721 nmdanvkkyd stgmfhwcpa kdiekviltr seaamtvlsg hvvvcifgdv ksaliglrnl
      781 vmplrasnfh yhelkhivfv gsleylrrew etlhnfpkvs ilpgtplsra dlravninlc
      841 dmcvilsanq nniddaslqd kecilaslni ksmqfddsig vlqansqgft ppgmdrtspd
      901 nspvhgllrq psittganip iitelvndsn vqfldqdddd dpdtelyltq pfacgtafav
      961 svldslmsat yfndniltli rtlvtggatp elealiaeen alrggystpq tlanrdrcrv
     1021 aqlalydgpf adlgdggcyg dlfckalkty nmlcfgiyrl rdahlstpsq ctkryvitnp
     1081 pyefelvptd lifclmqfdh nagqsrasls hsshssysss kksssvhsip stanrpnrtk
     1141 srdsrdkqkk emvyr
//
LOCUS       XP_041331785            1307 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X16
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331785
VERSION     XP_041331785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1307
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X16"
                     /calculated_mol_wt=146212
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <321..481
                     /region_name="PRK10537"
                     /note="voltage-gated potassium channel protein"
                     /db_xref="CDD:236711"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1307
                     /gene="KCNMA1"
                     /coded_by="XM_041475851.1:147..4070"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrqvkna arssypkcsy qfknattnal idakstegil epvplvnnrk
      721 gslflpnnps llhlnllssv eqgkstycrl qralslpvky ryhsqkpgln qdlledeqps
      781 tlspkkkqrn ggmrnspnss pklmrhdpll ipgneqidnm danvkkydst gmfhwcpakd
      841 iekviltrse aamtvlsghv vvcifgdvks aliglrnlvm plrasnfhyh elkhivfvgs
      901 leylrrewet lhnfpkvsil pgtplsradl ravninlcdm cvilsanqnn iddaslqdke
      961 cilaslniks mqfddsigvl qansqgftpp gmdrtspdns pvhgllrqps ittganipii
     1021 telvndsnvq fldqdddddp dtelyltqpf acgtafavsv ldslmsatyf ndniltlirt
     1081 lvtggatpel ealiaeenal rggystpqtl anrdrcrvaq lalydgpfad lgdggcygdl
     1141 fckalktynm lcfgiyrlrd ahlstpsqct kryvitnppy efelvptdli fclmqfdhna
     1201 gqsraslshs shssyssskk sssvhsipst anrpnrtksr dsrdkqnatr mnrmgqaekk
     1261 wftdepdnay prniqikpms thmanqinqy kstsslippi revedec
//
LOCUS       XP_041331792            1213 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X17
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331792
VERSION     XP_041331792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1213
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X17"
                     /calculated_mol_wt=135571
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          321..635
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1213
                     /gene="KCNMA1"
                     /coded_by="XM_041475858.1:147..3788"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrpkmsi ykrmrlaccf dcgrserdcs cmsgsvhsnm dtlerafpls
      721 svsvndcsts lrafedeqps tlspkkkqrn ggmrnspnss pklmrhdpll ipgneqidnm
      781 danvkkydst gmfhwcpakd iekviltrse aamtvlsghv vvcifgdvks aliglrnlvm
      841 plrasnfhyh elkhivfvgs leylrrewet lhnfpkvsil pgtplsradl ravninlcdm
      901 cvilsanqnn iddaslqdke cilaslniks mqfddsigvl qansqgftpp gmdrtspdns
      961 pvhgllrqps ittganipii telvndsnvq fldqdddddp dtelyltqpf acgtafavsv
     1021 ldslmsatyf ndniltlirt lvtggatpel ealiaeenal rggystpqtl anrdrcrvaq
     1081 lalydgpfad lgdggcygdl fckalktynm lcfgiyrlrd ahlstpsqct kryvitnppy
     1141 efelvptdli fclmqfdhna gqsraslshs shssyssskk sssvhsipst anrpnrtksr
     1201 dsrdkqkkem vyr
//
LOCUS       XP_041331799            1214 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X18
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331799
VERSION     XP_041331799.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475865.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1214
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X18"
                     /calculated_mol_wt=135713
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          321..635
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1214
                     /gene="KCNMA1"
                     /coded_by="XM_041475865.1:147..3791"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrpkmsi ykrmrlaccf dcgrserdcs cmsgsvhsnm dtlerafpls
      721 svsvndcsts lrafedeqps tlspkkkqrn ggmrnspnss pklmrhdpll ipgneqidnm
      781 danvkkydst gmfhwcpakd iekviltrse aamtvlsghv vvcifgdvks aliglrnlvm
      841 plrasnfhyh elkhivfvgs leylrrewet lhnfpkvsil pgtplsradl ravninlcdm
      901 cvilsanqnn iddaslqdke cilaslniks mqfddsigvl qansqgftpp gmdrtspdns
      961 pvhgllrqps ittganipii telvndsnvq fldqdddddp dtelyltqpf acgtafavsv
     1021 ldslmsatyf ndniltlirt lvtggatpel ealiaeenal rggystpqtl anrdrcrvaq
     1081 lalydgpfad lgdggcygdl fckalktynm lcfgiyrlrd ahlstpsqct kryvitnppy
     1141 efelvptdli fclmqfdhna gqsraslshs shssyssskk sssvhsipst anrpnrtksr
     1201 dsrdkqnrke mvyr
//
LOCUS       XP_041331809            1156 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit alpha-1 isoform X19
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331809
VERSION     XP_041331809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1156
                     /product="calcium-activated potassium channel subunit
                     alpha-1 isoform X19"
                     /calculated_mol_wt=129255
     Region          157..374
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          321..635
                     /region_name="TrkA"
                     /note="Trk/Ktr K+ transport system regulatory component
                     TrkA/KtrA/KtrC, RCK domain [Inorganic ion transport and
                     metabolism, Signal transduction mechanisms]; COG0569"
                     /db_xref="CDD:440335"
     Region          524..611
                     /region_name="BK_channel_a"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; pfam03493"
                     /db_xref="CDD:460947"
     CDS             1..1156
                     /gene="KCNMA1"
                     /coded_by="XM_041475875.1:147..3617"
                     /db_xref="GeneID:121357945"
ORIGIN      
        1 mangsgggsy pggsgsgirm shyinannln tdsssspvnv pkmdaliipv tmevpcdsrg
       61 qrmwwaflas smvtffgglf iillwrtlky lwtvcchcgv knkeaqking ggdtqadgac
      121 kptdekeenv aaevgwmtsv kdwagvmisa qtltgrvlvv lvfalsigal viyfidssnp
      181 iescqnfykd ftlqidmafn vffllyfglr fiaandklwf wlevnsvvdf ftvppvfvsv
      241 ylnrswlglr flralrliqf seilqflnil ktsnsiklvn lcsifistwl taagfihlve
      301 nsgdpwenfq nnqpltywec vyllmvtmst vgygdvyakt tlgrlfmvff ilgglamfas
      361 yvpeiielig nrkkyggsys avsgrkhivv cghitlesvs nflkdflhkd rddvnveivf
      421 lhnispnlel ealfkrhftq vefyqgsvln phdlarvkie sadaclilan kycadpdaed
      481 asnimrvisi knyhpkirii tqmlqyhnka hllnipswnw kegddaicla elklgfiaqs
      541 clapglstml anlfsmrsfi kieedtwqky ylegvanemy teylssafvg lsfpavcelv
      601 faklkllmia ieyksekres silinpgnhv kiqegtlgff iasdakevkr ayfyckachd
      661 ditdpkrikk cgckrledeq pstlspkkkq rnggmrnspn sspklmrhdp llipgneqid
      721 nmdanvkkyd stgmfhwcpa kdiekviltr seaamtvlsg hvvvcifgdv ksaliglrnl
      781 vmplrasnfh yhelkhivfv gsleylrrew etlhnfpkvs ilpgtplsra dlravninlc
      841 dmcvilsanq nniddaslqd kecilaslni ksmqfddsig vlqansqgft ppgmdrtspd
      901 nspvhgllrq psittganip iitelvndsn vqfldqdddd dpdtelyltq pfacgtafav
      961 svldslmsat yfndniltli rtlvtggatp elealiaeen alrggystpq tlanrdrcrv
     1021 aqlalydgpf adlgdggcyg dlfckalkty nmlcfgiyrl rdahlstpsq ctkryvitnp
     1081 pyefelvptd lifclmqfdh nagqsrasls hsshssysss kksssvhsip stanrpnrtk
     1141 srdsrdkqnr kemvyr
//
LOCUS       XP_041331820             554 aa            linear   VRT 06-MAY-2021
DEFINITION  protein NDNF-like [Pyrgilauda ruficollis].
ACCESSION   XP_041331820
VERSION     XP_041331820.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475886.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="protein NDNF-like"
                     /calculated_mol_wt=62477
     Region          192..322
                     /region_name="NDNF"
                     /note="Neuron-derived neurotrophic factor, first Fn(III)
                     domain; pfam10179"
                     /db_xref="CDD:462981"
     Region          381..554
                     /region_name="NDNF_C"
                     /note="Neuron-derived Neurotrophic Factor C-terminal;
                     pfam19433"
                     /db_xref="CDD:466079"
     CDS             1..554
                     /gene="LOC121358036"
                     /coded_by="XM_041475886.1:1..1665"
                     /db_xref="GeneID:121358036"
ORIGIN      
        1 msclwlylpl hllmatclch sikahttssq qsfksnlfnf yhsliladgk ettvhllkdi
       61 pkryyfvlee grtlapfsit vtpcdvpiew silvyksppg kaapgdhatq evsksnkass
      121 mvstifnykg nsvetymgms shsalyllef lsterdthit vylttdttsg hlypelpadp
      181 ridvigight tvtlawkhsp svlqhresiq ycllvnekhn ykslcaaeta irssgmklpp
      241 tlalslspyl lepqqvmils nselsiinkv ssgevrqvcm gtkntytvpn lspstqyyfd
      301 vfivnlltna saaytgtfar tleepepkvt elkdgkvihv vldgkkqkfy slqyqarhkk
      361 ihftfqlcrg qirvhitrng ktvasenlsg lryfslkgkl ldtysvqlrs teesnssvkv
      421 lasphfhkpl fpllpeslki ksfsklrtcr svtiawlgtq eeskycvyrk rieedqiwre
      481 lqsadmcsgp esrpksekvl ckyfydlnlq ravttetikg leagtlylfd vylfgpsgip
      541 vryhskvvkt rkkc
//
LOCUS       XP_041331833             626 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat, immunoglobulin-like domain and transmembrane
            domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331833
VERSION     XP_041331833.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475899.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..626
                     /product="leucine-rich repeat, immunoglobulin-like domain
                     and transmembrane domain-containing protein 1"
                     /calculated_mol_wt=68327
     Region          61..84
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <63..>182
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          85..108
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          109..132
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          133..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          157..170
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          254..332
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          431..498
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     CDS             1..626
                     /gene="LRIT1"
                     /coded_by="XM_041475899.1:51..1931"
                     /db_xref="GeneID:121358045"
ORIGIN      
        1 mrpavtllcc walaalprag gscpsqcsca fhslsegtka rtvlcndpem tlppvnipvd
       61 tsklriekta irrvpgeafh llhnleylwm pynslaslss itfkglrrlq elrldgnnli
      121 sfpweslagm pqlrlldlhn neltsippda aryvknityl dlssnklmtl pqaliatwan
      181 lqavpyfpnd nskiilglqd npwvcdcsly emvhflnfqs pniafieprl kcftprslag
      241 vffsqvelrk cqspvvhtsv akvktilgst vllrcgttgv pipelswrra dgaqlngtvh
      301 qeissdgmsw silglpvvsy ldsgeyicka knflgateaf isliitdses tddpnssakg
      361 twngkasgme aaayndklva ryvittstvp tlgagagtgd svllpdaaqd snpqnllvsp
      421 ttgqqeperm vrsvrvigdt dqsitlawka pmaknttvfs vlyavfgerd mrrinvepgk
      481 tkvtlygllp ktkyivcvcv kgliprkeqc iifstdevvs aggtqklinv vvisvacvia
      541 vpltlvvccg alkrrckkcf vrkpkdvqes yvtfeslspg akakgvegey ltrhtpdesn
      601 rllsarssvd seaipkiegq pneyfc
//
LOCUS       XP_041331846             524 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat, immunoglobulin-like domain and transmembrane
            domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331846
VERSION     XP_041331846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475912.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..524
                     /product="leucine-rich repeat, immunoglobulin-like domain
                     and transmembrane domain-containing protein 2"
                     /calculated_mol_wt=57422
     Region          <14..>129
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          17..39
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          40..63
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          64..87
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          88..111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          112..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          136..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          159..>194
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     Region          220..303
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          229..233
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409568"
     Region          242..249
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409568"
     Region          269..273
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409568"
     Region          283..288
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409568"
     Region          296..299
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409568"
     Region          323..403
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     CDS             1..524
                     /gene="LRIT2"
                     /coded_by="XM_041475912.1:98..1672"
                     /db_xref="GeneID:121358049"
ORIGIN      
        1 msallrqipa nipqdmrkir ienshltelp rgsfenvsal eylwlnfnni tvmhiksley
       61 lpalkelrlq gnklssvpwt afqdtptlki ldlkhnrldv lpehalrylp nltyldlssn
      121 qltiisrdvf ynwpvyqrsq rtegpledis navlalhdnp wicdcrlrgf vqfiksvgpp
      181 iilmnsyltc sgpkfrtgkf fhevelnsct kpltsaldtn ltvpaglnit ltcfvqasps
      241 pavwwtyalk llrafnvste pvsedtvrse llipaarpad agnytctaan flgntsvais
      301 lrvvapwast targwapmap aepgahvevr iakqtvygit lewfaaaaaa aepgetwytl
      361 lvgrydaahk dtiyigpgvn tysvtdllpa tkyevcvavr nqaprkgqcv vfvtgsdvsq
      421 meqreklihi vvivcamvla vpagmyacta ealpgclarc psacprrrrg gpaqaagske
      481 stldslpags edglcrpegg arrpadrpep gkarpphrns adly
//
LOCUS       XP_041331860             257 aa            linear   VRT 06-MAY-2021
DEFINITION  catechol O-methyltransferase domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331860
VERSION     XP_041331860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475926.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="catechol O-methyltransferase domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=28462
     Region          55..257
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(104..110,129..130,160..162)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..257
                     /gene="COMTD1"
                     /coded_by="XM_041475926.1:73..846"
                     /db_xref="GeneID:121358055"
ORIGIN      
        1 mpllsvpkev avgtamlgva fatgmlagkr ypsfifgtps gmmgknsplr qyildhslre
       61 hpilkklrll tadhprgrmm vsceqaqlma nllklikakk vieigvftgy nalsmalvlp
      121 dngqviacdv nedyakigrp lwkeagvehk idlrikpaiq tldellange vetfdfafid
      181 adkesyneyy ekclrlikkg giiaidnvfw ngkvlkprkd dlaaqsihrl nekllrdarv
      241 nismlpvgdg vtlafkl
//
LOCUS       XP_041331868             216 aa            linear   VRT 06-MAY-2021
DEFINITION  catechol O-methyltransferase domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331868
VERSION     XP_041331868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="catechol O-methyltransferase domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=24309
     Region          14..216
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(63..69,88..89,119..121)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..216
                     /gene="COMTD1"
                     /coded_by="XM_041475934.1:483..1133"
                     /db_xref="GeneID:121358055"
ORIGIN      
        1 mmgknsplrq yildhslreh pilkklrllt adhprgrmmv sceqaqlman llklikakkv
       61 ieigvftgyn alsmalvlpd ngqviacdvn edyakigrpl wkeagvehki dlrikpaiqt
      121 ldellangev etfdfafida dkesyneyye kclrlikkgg iiaidnvfwn gkvlkprkdd
      181 laaqsihrln ekllrdarvn ismlpvgdgv tlafkl
//
LOCUS       XP_041331889             609 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 503 [Pyrgilauda ruficollis].
ACCESSION   XP_041331889
VERSION     XP_041331889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="zinc finger protein 503"
                     /calculated_mol_wt=61283
     Region          105..>138
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     Region          332..390
                     /region_name="nlz1"
                     /note="NocA-like zinc-finger protein 1; pfam12402"
                     /db_xref="CDD:403564"
     Region          479..505
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..609
                     /gene="ZNF503"
                     /coded_by="XM_041475955.1:351..2180"
                     /db_xref="GeneID:121358073"
ORIGIN      
        1 mitspslsai rsskrsssls epggsprrsr saadlagpng hagnngssaa akpcfhavpp
       61 sdplrqanrl pikvlkmlta rtghilhpey lqplpstpvs pieldakksp lallaqtcsq
      121 igkpdpspss klssvtsngs agdkdsksgp lklsdigved kssfkpyskp gaekkepgaa
      181 gcagapaagv aageksgfrv psatcqpftp rtgspnssas acspgllpte gkggedkkds
      241 egcgksgssg seggpgttsi shsrisvsca ginvevnqhq estpgskpia sdsasscsst
      301 tatsstsvlg sglvapvspy kpgqtvfplp pagmsypgtl agayagyppq flphgvaldp
      361 tkssslvgaq laaasslgcs kpagssplag asppsvmtas lcrdpyclsy hcashlagaa
      421 gascahdqal ksgyplvypt hplhsvhssl tgatppslag hplypygfml pndpqphicn
      481 wvsangpcdk rfatseells hlrthtafpg tdkllssyps ssslasaaaa amachmhipt
      541 tgapgspgtl alrsphhalg lgsryhpysk splptpgapv pvpaatgpyy spyalygqrl
      601 ttasalgyq
//
LOCUS       XP_041331912             898 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 8
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331912
VERSION     XP_041331912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475978.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..898
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 8 isoform X1"
                     /calculated_mol_wt=96876
     Region          37..161
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          208..406
                     /region_name="ZnMc_adamalysin_II_like"
                     /note="Zinc-dependent metalloprotease; adamalysin_II_like
                     subfamily. Adamalysin II is a snake venom zinc
                     endopeptidase. This subfamily contains other snake venom
                     metalloproteinases, as well as membrane-anchored
                     metalloproteases belonging to the ADAM family; cd04269"
                     /db_xref="CDD:239797"
     Site            order(342..343,346,352)
                     /site_type="active"
                     /db_xref="CDD:239797"
     Region          425..499
                     /region_name="DISIN"
                     /note="Homologues of snake disintegrins; smart00050"
                     /db_xref="CDD:214490"
     Region          502..637
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     Region          <687..>844
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <784..>898
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..898
                     /gene="ADAM8"
                     /coded_by="XM_041475978.1:35..2731"
                     /db_xref="GeneID:121358088"
ORIGIN      
        1 mapplllpll pllllplpar gstggleekl phveryetvl prelpvprgk rdlsappsty
       61 pshvlygira egrehllwle knrallgqny tethyaadgs eiteqpdtqd hcfyqghvrg
      121 qpdsaasist cgglsgffrv nettfvlepl qgavagrhav yraahlrgrr gtcrepgass
      181 lqydrepkip aamklyrwks gpvqkgpryv elvlvadnqe frkhkdlrtv qnrmkeivnh
      241 vdklyqplrl rvaliglevw nhrdkitvsp npevtldnfl hwresellrk kphdnaqlit
      301 gvdfhgntvg lakklvmctr dsggvnqdhs tnpigaastm ahemghnlgm shdedvagcr
      361 cpvpkadggc vmagsvglvy pklfsrcseq dmwqflgdpr tscllnapra delyggpvcg
      421 nqfvergeqc dcgtpqecsd rccnattcql regaecarge ccqdckvkaa gtlcrasknd
      481 cdlaehcsgl saecpedvfq engiscqhgs gycyngacps hgeqcralwg aeaqvapdvc
      541 fkhnseqhvh lhclteygkq pcspkdvkcg tllclsdktq pilgsgyysf gyyfgrfkck
      601 aviagsdage aaelrlvptg akcgeemvcy agrcqnlqvy gdkncsakcn nhgvcnhrre
      661 chcdpgwaap yceqeisgia agtvprrepg egagtawevl lrprapgfvp agsgsavlaa
      721 glavlalagv glgsgllllr araarrshkg sssgtpsgla nplfqeggra rpcrrqlsrr
      781 digqpslvss taaprarahs pvlpralspv lprahspvla rahspvlapq psapgplgpp
      841 rspprwapqa kpkppskplp alkskvpshg egppapslpt fqrcpppkva lkppparr
//
LOCUS       XP_041331921             868 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 8
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331921
VERSION     XP_041331921.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041475987.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..868
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 8 isoform X2"
                     /calculated_mol_wt=93749
     Region          37..161
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          208..406
                     /region_name="ZnMc_adamalysin_II_like"
                     /note="Zinc-dependent metalloprotease; adamalysin_II_like
                     subfamily. Adamalysin II is a snake venom zinc
                     endopeptidase. This subfamily contains other snake venom
                     metalloproteinases, as well as membrane-anchored
                     metalloproteases belonging to the ADAM family; cd04269"
                     /db_xref="CDD:239797"
     Site            order(342..343,346,352)
                     /site_type="active"
                     /db_xref="CDD:239797"
     Region          425..499
                     /region_name="DISIN"
                     /note="Homologues of snake disintegrins; smart00050"
                     /db_xref="CDD:214490"
     Region          502..637
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     Region          <754..>868
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..868
                     /gene="ADAM8"
                     /coded_by="XM_041475987.1:35..2641"
                     /db_xref="GeneID:121358088"
ORIGIN      
        1 mapplllpll pllllplpar gstggleekl phveryetvl prelpvprgk rdlsappsty
       61 pshvlygira egrehllwle knrallgqny tethyaadgs eiteqpdtqd hcfyqghvrg
      121 qpdsaasist cgglsgffrv nettfvlepl qgavagrhav yraahlrgrr gtcrepgass
      181 lqydrepkip aamklyrwks gpvqkgpryv elvlvadnqe frkhkdlrtv qnrmkeivnh
      241 vdklyqplrl rvaliglevw nhrdkitvsp npevtldnfl hwresellrk kphdnaqlit
      301 gvdfhgntvg lakklvmctr dsggvnqdhs tnpigaastm ahemghnlgm shdedvagcr
      361 cpvpkadggc vmagsvglvy pklfsrcseq dmwqflgdpr tscllnapra delyggpvcg
      421 nqfvergeqc dcgtpqecsd rccnattcql regaecarge ccqdckvkaa gtlcrasknd
      481 cdlaehcsgl saecpedvfq engiscqhgs gycyngacps hgeqcralwg aeaqvapdvc
      541 fkhnseqhvh lhclteygkq pcspkdvkcg tllclsdktq pilgsgyysf gyyfgrfkck
      601 aviagsdage aaelrlvptg akcgeemvcy agrcqnlqvy gdkncsakcn nhgvcnhrre
      661 chcdpgwaap yceqeisgia agsgsavlaa glavlalagv glgsgllllr araarrshkg
      721 sssgtpsgla nplfqeggra rpcrrqlsrr digqpslvss taaprarahs pvlpralspv
      781 lprahspvla rahspvlapq psapgplgpp rspprwapqa kpkppskplp alkskvpshg
      841 egppapslpt fqrcpppkva lkppparr
//
LOCUS       XP_041331935             729 aa            linear   VRT 06-MAY-2021
DEFINITION  inhibitor of nuclear factor kappa-B kinase subunit alpha
            [Pyrgilauda ruficollis].
ACCESSION   XP_041331935
VERSION     XP_041331935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..729
                     /product="inhibitor of nuclear factor kappa-B kinase
                     subunit alpha"
                     /calculated_mol_wt=82939
     Region          5..293
                     /region_name="STKc_IKK_alpha"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inhibitor of Nuclear Factor-KappaB Kinase (IKK) alpha;
                     cd14039"
                     /db_xref="CDD:270941"
     Site            order(5..9,13,26,28,58,79..82,86,88,128,130,132..133,135,
                     149,152,167..170)
                     /site_type="active"
                     /db_xref="CDD:270941"
     Site            order(5..9,13,26,28,58,79..82,86,128,130,132..133,135,149)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270941"
     Site            order(9,86,88,128,130,132,152,167..170)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270941"
     Site            order(92,94,98,101,202,207,235..236,238,244..247)
                     /site_type="other"
                     /note="putative SDD interface [polypeptide binding]"
                     /db_xref="CDD:270941"
     Site            148..170
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270941"
     Region          295..371
                     /region_name="Ubl_IKKA_like"
                     /note="ubiquitin-like (Ubl) domain found in inhibitor of
                     nuclear factor kappa-B kinases, IKK-alpha and IKK-beta,
                     and similar proteins; cd17046"
                     /db_xref="CDD:340566"
     Region          370..643
                     /region_name="IKBKB_SDD"
                     /note="IQBAL scaffold dimerization domain; pfam18397"
                     /db_xref="CDD:465745"
     Region          693..728
                     /region_name="IKKbetaNEMObind"
                     /note="I-kappa-kinase-beta NEMO binding domain; pfam12179"
                     /db_xref="CDD:463485"
     CDS             1..729
                     /gene="CHUK"
                     /coded_by="XM_041476001.1:103..2292"
                     /db_xref="GeneID:121358096"
ORIGIN      
        1 mrdrlgtggf gnvclyqhqd sgdrvaiksc rlelsvknkd rwcheidimk klnhpnvvra
       61 cevpeemnfl vndvpllame ycsggdlrkl lnkpenccgl kesqilslls digsgiqylh
      121 enriihrdlk penivlqdeg gkivhkiidl gyakdldqgs lctsfvgtlq ylapelfenk
      181 sysvtvdyws fgtmvfecia gfrpflhnlq pfawhekikk kdpkhifase emngevrfst
      241 hlpqphslcg livepmenwl qlmlnwdpqq rgggsdpets rprcflimdh ilnlkivhil
      301 nmtsakivsf llhpeeslhs lqnriefetg istgnqelll etgicldprk pasqcvidgv
      361 rgwdsymvyl fdksktvydg pfasrslsdc vnyivqdski qlpipqlrkv waeavhyvig
      421 lkedysrlfq gqraamlsll rynanlikmk nnmvsasqql kakleffhqs irldlerysd
      481 qmaygissek mlkawkemee kasqcaqaed igyldeqima lhteivelqk spyarrqgev
      541 mesleqraid lykqlktrpp dhaysdstdm vkiivqtvqs qdrvlkelfg hlskllgckq
      601 kiidllpeie valnnikead nsvmqmqgkr qreiwhllki actqsssrsl vssslegtas
      661 tpaatwlpqs ssgnaaphpl sslaapedge nfadmirenv nylelfssil qevrqeqnsm
      721 msfdwswlk
//
LOCUS       XP_041331949             537 aa            linear   VRT 06-MAY-2021
DEFINITION  CWF19-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331949
VERSION     XP_041331949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476015.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="CWF19-like protein 1"
                     /calculated_mol_wt=59765
     Region          9..229
                     /region_name="MPP_CWF19_N"
                     /note="Schizosaccharomyces pombe CWF19 and related
                     proteins, N-terminal metallophosphatase domain; cd07380"
                     /db_xref="CDD:277326"
     Site            order(13,15,43,73..74,155,197)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277326"
     Site            order(13,15,43,73,155,197)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277326"
     Region          13..>145
                     /region_name="MPP_superfamily"
                     /note="metallophosphatase superfamily, metallophosphatase
                     domain; cl13995"
                     /db_xref="CDD:472684"
     Region          318..422
                     /region_name="HIT_like"
                     /note="HIT family: HIT (Histidine triad) proteins, named
                     for a motif related to the sequence HxHxH/Qxx (x, a
                     hydrophobic amino acid), are a superfamily of nucleotide
                     hydrolases and transferases, which act on the
                     alpha-phosphate of ribonucleotides. On the basis...;
                     cl00228"
                     /db_xref="CDD:469672"
     Region          442..533
                     /region_name="CwfJ_C_2"
                     /note="Protein similar to CwfJ C-terminus 2; pfam04676"
                     /db_xref="CDD:461388"
     CDS             1..537
                     /gene="CWF19L1"
                     /coded_by="XM_041476015.1:100..1713"
                     /db_xref="GeneID:121358100"
ORIGIN      
        1 maaaplrvla cgdvegrlea ifgrvraiqa ksgrfdmllc vgnffgstse aewaeyrtga
       61 kkapiptyvl gannpdtlsy fpdvsgcela enitylgrrg vysgcsglqi aylsgteapq
      121 qpapahcfsa kdvaelkssl lsapnfrgvd illtspwprd vgtfansage idtkksgskl
      181 vsdlaaslkp ryhfaaleka yyerlpyrnh mvlqetpqhv trfialadvg ntskkkylya
      241 fsivpmssmd paelvkqpqd vtenpyrklr keapkskaal saeeepacqf ffdlnkhqgk
      301 krpsdgkerg dsqpkqakkp pqptgpcwfc laspevekhl vvsigthcyl alakgglspd
      361 hvlilpighy qsvvdlssev leevtkykaa lkeffrskgk ryvlfernyr sqhlqlqvip
      421 vpldlctsed ikeafitqaq eqqielleip ehsdiaqvaq pgtpyfyvel dtgeklfhri
      481 rgrfplqfgr evlasealla qpqradwrqc aaqrpeeaaq arafrrdfep fdfslrd
//
LOCUS       XP_041331962             384 aa            linear   VRT 06-MAY-2021
DEFINITION  erlin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041331962
VERSION     XP_041331962.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476028.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="erlin-1 isoform X1"
                     /calculated_mol_wt=42352
     Region          55..347
                     /region_name="SPFH_like_u3"
                     /note="Uncharacterized family; SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cd03406"
                     /db_xref="CDD:259804"
     CDS             1..384
                     /gene="ERLIN1"
                     /coded_by="XM_041476028.1:13..1167"
                     /db_xref="GeneID:121358107"
ORIGIN      
        1 mvpragarar rgwerglgst wgtgqgprsp asggdasmam aqagaaaaaa tgllvfllys
       61 aihrveeghl avyyrggall tspsgpgyhi mlpfittfks vqttlqtdev knvpcgtsgg
      121 vmiyidriev vnklapyavy divrnytady dktlifnkih helnqfcsah tlqevyielf
      181 dqidenlkla lqkdlnvmap gltiqavrvt kpkipeairr nfelmeaekt klliaaqrqk
      241 vvekeaetdr kkalieaeka aqvarihyqq kimeketekr iseiedaafl arekakadae
      301 yytarklads nklkltpeyl elmkyqaiaa nsklyfgdri pgvfldscaf qqaslrtahq
      361 tslpaqetpe tpgesplrgk essg
//
LOCUS       XP_041331971             347 aa            linear   VRT 06-MAY-2021
DEFINITION  erlin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331971
VERSION     XP_041331971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="erlin-1 isoform X2"
                     /calculated_mol_wt=38616
     Region          18..310
                     /region_name="SPFH_like_u3"
                     /note="Uncharacterized family; SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cd03406"
                     /db_xref="CDD:259804"
     CDS             1..347
                     /gene="ERLIN1"
                     /coded_by="XM_041476037.1:118..1161"
                     /db_xref="GeneID:121358107"
ORIGIN      
        1 mamaqagaaa aaatgllvfl lysaihrvee ghlavyyrgg alltspsgpg yhimlpfitt
       61 fksvqttlqt devknvpcgt sggvmiyidr ievvnklapy avydivrnyt adydktlifn
      121 kihhelnqfc sahtlqevyi elfdqidenl klalqkdlnv mapgltiqav rvtkpkipea
      181 irrnfelmea ektklliaaq rqkvvekeae tdrkkaliea ekaaqvarih yqqkimeket
      241 ekriseieda aflarekaka daeyytarkl adsnklkltp eylelmkyqa iaansklyfg
      301 dripgvflds cafqqaslrt ahqtslpaqe tpetpgespl rgkessg
//
LOCUS       XP_041331978             347 aa            linear   VRT 06-MAY-2021
DEFINITION  erlin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041331978
VERSION     XP_041331978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="erlin-1 isoform X2"
                     /calculated_mol_wt=38616
     Region          18..310
                     /region_name="SPFH_like_u3"
                     /note="Uncharacterized family; SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cd03406"
                     /db_xref="CDD:259804"
     CDS             1..347
                     /gene="ERLIN1"
                     /coded_by="XM_041476044.1:43..1086"
                     /db_xref="GeneID:121358107"
ORIGIN      
        1 mamaqagaaa aaatgllvfl lysaihrvee ghlavyyrgg alltspsgpg yhimlpfitt
       61 fksvqttlqt devknvpcgt sggvmiyidr ievvnklapy avydivrnyt adydktlifn
      121 kihhelnqfc sahtlqevyi elfdqidenl klalqkdlnv mapgltiqav rvtkpkipea
      181 irrnfelmea ektklliaaq rqkvvekeae tdrkkaliea ekaaqvarih yqqkimeket
      241 ekriseieda aflarekaka daeyytarkl adsnklkltp eylelmkyqa iaansklyfg
      301 dripgvflds cafqqaslrt ahqtslpaqe tpetpgespl rgkessg
//
LOCUS       XP_041331990             262 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily C member 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041331990
VERSION     XP_041331990.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476056.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="dnaJ homolog subfamily C member 9"
                     /calculated_mol_wt=29847
     Region          15..79
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(43..45,56,59..60,63..64)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..262
                     /gene="DNAJC9"
                     /coded_by="XM_041476056.1:78..866"
                     /db_xref="GeneID:121358125"
ORIGIN      
        1 malaqqceaa fgtadlygvl gvrrgasaqd irrgyhrasl rlhpdrvpae qkeeatrrfq
       61 ilgkvyavls dekqravyde tgmvdedaea lqdgrdwley wqllfkvtvk dieefkstyk
      121 nseeeladvk aaylnfkgdm drimesvlcv dytdeprire mieraiesge vpsykafvke
      181 skqktvsrrk raekeakeak kmiddlglsg endlqalikr rskdrekemd nffahleaky
      241 gnsakkggkk tsakkrkaeg td
//
LOCUS       XP_041332000             153 aa            linear   VRT 06-MAY-2021
DEFINITION  DPY30 domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332000
VERSION     XP_041332000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..153
                     /product="DPY30 domain-containing protein 1"
                     /calculated_mol_wt=18065
     Region          2..45
                     /region_name="DD_DYDC-like"
                     /note="dimerization/docking (D/D) domain found in the
                     DPY30 domain-containing protein (DYDC)-like family;
                     cd22966"
                     /db_xref="CDD:438535"
     Region          <44..>108
                     /region_name="PLN02316"
                     /note="synthase/transferase"
                     /db_xref="CDD:215180"
     CDS             1..153
                     /gene="DYDC1"
                     /coded_by="XM_041476066.1:107..568"
                     /db_xref="GeneID:121358136"
ORIGIN      
        1 mesqylkqcl gtclkkglae vvehrpadpi eylahwiyny rrnldeekkr vleraeleqe
       61 reaalaeler lkiqeeeqrk leeqqaqlek eraeleaqkk kaemqlqqen ektiaeitpe
      121 epaetvpsqt dlptvteeee eeeeeeeeee een
//
LOCUS       XP_041332010             352 aa            linear   VRT 06-MAY-2021
DEFINITION  renalase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332010
VERSION     XP_041332010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="renalase isoform X1"
                     /calculated_mol_wt=38166
     Region          27..333
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..352
                     /gene="RNLS"
                     /coded_by="XM_041476076.1:19..1077"
                     /db_xref="GeneID:121358147"
ORIGIN      
        1 marvlvvgag ltgaagaall rgaprgqvav wdkargsggr msttrtdrgs adlgaqfvtc
       61 epelagprls fyeelvthgi lkplaapveg mvvregsrny vapqgissvv kyyleqsgad
      121 vsyeqhvthi slrdgrwevs rkagppeqfd vviltmpvpq ilqlqgdivn iinesqkqql
      181 esvsyssrya lglfyeagtg igvpwaaryi adnpcvrfis idnekrnies pdigpsvvvh
      241 ttvtfgrqhl dtdpaevqqi ilshlqkivp slpkpssikc qrwrysqvtr avpncpgqmi
      301 lhtqpllicg gdgftrsnfd gciesamsla eavkphlqqf qtqaakipld ll
//
LOCUS       XP_041332017             328 aa            linear   VRT 06-MAY-2021
DEFINITION  renalase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332017
VERSION     XP_041332017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="renalase isoform X2"
                     /calculated_mol_wt=35483
     Region          27..295
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..328
                     /gene="RNLS"
                     /coded_by="XM_041476083.1:1..987"
                     /db_xref="GeneID:121358147"
ORIGIN      
        1 marvlvvgag ltgaagaall rgaprgqvav wdkargsggr msttrtdrgs adlgaqfvtc
       61 epelagprls fyeelvthgi lkplaapveg mvvregsrny vapqgissvv kyyleqsgad
      121 vsyeqhvthi slrdgrwevs rkagppeqfd vviltmpvpq ilqlqgdivn iinesqkqql
      181 esvsyssrya lglfyeagtg igvpwaaryi adnpcvrfis idnekrnies pdigpsvvvh
      241 ttvtfgrqhl dtdpaevqqi ilshlqkivp slpkpssikc qrwrysqvap pgsaprgmeq
      301 plsrgggggg rvtgfifkki qakflpwr
//
LOCUS       XP_041332027             305 aa            linear   VRT 06-MAY-2021
DEFINITION  renalase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041332027
VERSION     XP_041332027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="renalase isoform X3"
                     /calculated_mol_wt=33267
     Region          27..287
                     /region_name="COG3380"
                     /note="Predicted NAD/FAD-dependent oxidoreductase [General
                     function prediction only]"
                     /db_xref="CDD:442607"
     CDS             1..305
                     /gene="RNLS"
                     /coded_by="XM_041476093.1:1..918"
                     /db_xref="GeneID:121358147"
ORIGIN      
        1 marvlvvgag ltgaagaall rgaprgqvav wdkargsggr msttrtdrgs adlgaqfvtc
       61 epelagprls fyeelvthgi lkplaapveg mvvregsrny vapqgissvv kyyleqsgad
      121 vsyeqhvthi slrdgrwevs rkagppeqfd vviltmpvpq ilqlqgdivn iinesqkqql
      181 esvsyssrya lglfyeagtg igvpwaaryi adnpcvrfis idnekrnies pdigpsvvvh
      241 ttvtfgrqhl dtdpaevqqi ilshlqkivp slpkpssikc qrwrysqrqe vpfpvldlrl
      301 qaplc
//
LOCUS       XP_041332037             432 aa            linear   VRT 06-MAY-2021
DEFINITION  urokinase-type plasminogen activator [Pyrgilauda ruficollis].
ACCESSION   XP_041332037
VERSION     XP_041332037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="urokinase-type plasminogen activator"
                     /calculated_mol_wt=48618
     Region          38..71
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          78..156
                     /region_name="KR"
                     /note="Kringle domain; Kringle domains are believed to
                     play a role in binding mediators, such as peptides, other
                     proteins, membranes, or phospholipids. They are autonomous
                     structural domains, found in a varying number of copies,
                     in blood clotting and...; cl00100"
                     /db_xref="CDD:412161"
     Site            87
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(98,112,137,139,148)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          171..416
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            171
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(215,270,371)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(365,390,392)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..432
                     /gene="PLAU"
                     /coded_by="XM_041476103.1:93..1391"
                     /db_xref="GeneID:121358165"
ORIGIN      
        1 mkllifltvs lgalvtgles tyswkyykly krrsehkecp clnggtcity ylfsgigrci
       61 cpdgytgihc eldtdstcyt engedyrgma tedkclpwnl pslirrgryh aysenalqlg
      121 lgkhsycrnp ngrsrpwcyt krgsaiqetp cniekcgptc gqrsisknfk ivggkqaeve
      181 sqpwiagifq tirgmehflc ggslidpcwv ltaahcfhtp skrpinksvy kvflgksiln
      241 vtddkeqvfm vdeiishpdf tddtggnend ialirirtts gqcaveskyv rtvclpernl
      301 ylkenthcei agygkqdfyd ifyaqrlmsa tvnlisqrkc kyeyydnirv tdnmvcagdp
      361 twqidackgd sggpmvcehn grmmvygivs wgdgcakenk pgvytrvtqy lnwidssmng
      421 laaksrflpe pk
//
LOCUS       XP_041332048             236 aa            linear   VRT 06-MAY-2021
DEFINITION  dickkopf-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332048
VERSION     XP_041332048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..236
                     /product="dickkopf-related protein 1"
                     /calculated_mol_wt=24420
     Region          27..119
                     /region_name="Dkk_Cys1"
                     /note="first cysteine-rich (Cys-1) domain of Dickkopf
                     proteins; cl04692"
                     /db_xref="CDD:471087"
     Region          153..234
                     /region_name="Dkk1_Cys2"
                     /note="second cysteine-rich (Cys-2) domain of
                     Dickkopf-related protein 1; cd23272"
                     /db_xref="CDD:437998"
     Site            order(156,162,175..177,179..180,189..190,192..198,
                     200..201,203..205,207,215..216,229..231)
                     /site_type="other"
                     /note="LRP5/6 binding site [polypeptide binding]"
                     /db_xref="CDD:437998"
     CDS             1..236
                     /gene="DKK1"
                     /coded_by="XM_041476114.1:1..711"
                     /db_xref="GeneID:121358176"
ORIGIN      
        1 mrglvallaa lscaapagra aapggalssn aikgpppgga aeasaapapp fdgsnkappa
       61 atrqpfpcae dedcgpeefc ggaargggap lclgcrrrrk rclrdamccp gmacsnglct
      121 plepphgaae ldetgteals rrtpapawlp takgeegdfc lrssdcaagl ccarhfwski
      181 ckpvlregqv ctrhrrkgsh gleifqrcqc aeglacrlqr ehgpadasrl htcqrh
//
LOCUS       XP_041332061            1821 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger SWIM domain-containing protein 8 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332061
VERSION     XP_041332061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476127.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1821
                     /product="zinc finger SWIM domain-containing protein 8
                     isoform X1"
                     /calculated_mol_wt=198834
     Region          106..>247
                     /region_name="SWIM"
                     /note="Uncharacterized protein, contains SWIM-type Zn
                     finger domain [Function unknown]; COG4715"
                     /db_xref="CDD:443750"
     Region          1716..>1813
                     /region_name="Ins_allergen_rp"
                     /note="Insect allergen related repeat, nitrile-specifier
                     detoxification; pfam06757"
                     /db_xref="CDD:462003"
     CDS             1..1821
                     /gene="ZSWIM8"
                     /coded_by="XM_041476127.1:17..5482"
                     /db_xref="GeneID:121358184"
ORIGIN      
        1 melmfaewed gerfsfedsd rfeedslcsf iseaeslcqn wrgwrkqsag pnsptvkmkd
       61 glviplvels akqvafhipf evvekvyppv peqlqlriaf wsfpeneedi rlysclangs
      121 adefqrgeql frvravkdpl qigfhlsatv vppqmvppkg aynvavmfdr critscsctc
      181 gagakwcahv valclfrihn asavclrapv seslsrlqrd qlqkfaqyli selpqqilpt
      241 aqrlldells sqstaintvc gapdptagps asdqstwyld estlsdnikk tlhkfcgptp
      301 vvfsdvnsmy lssteppaaa ewaclrrplr grepegiwnl lsivremfkr rdsnaaplle
      361 iltdqclnye qitgwwysvr tsashssasg htgrssgqse vaahacasmc demvvlwrla
      421 vldptispqr rrdlcsqlrq wqlkvidnvk rgqhkkslek lfqgfkpave acyfsweeay
      481 pipgitysst dkknsfcwvk aiqqrscrlq cvesaceagr thgqelggpc lqpgdrlrps
      541 pqepavrpke ltgkrkvvse tpqrvlrrls aegdkavykt avskaklpvs kgltskhsgk
      601 rrmssedssl epdlaemsld dsslalgaea sntfsftesp lsrsyrdafe edggvyfseg
      661 peptlrsssm akkppkdpvg emgsgdddlp sadensggms lkpeevgeng aagggddgee
      721 eddyqvyyln pqevakeddd kaeggieeeq difagikple qenrmeilfa caealyahgy
      781 sneacrltve lardllanpp dlkveqpptk gkknkvstsk qtwmatntls kaaflltvls
      841 erleyhnlaf qigmfalelq rppastkale vklayqesei aallkkiplg tnemntirgr
      901 aeelregtlc dyrpvlplml asfifdvlct pvvsptgsrp psrnwnnemp gdeelgfeaa
      961 vaalgmkttv seaehpllce gtrrekgdla lalmitykdd qsklkkildk lldresqthk
     1021 pqtlssfyss skpavanqks pskhaaqsaa aiqqlpgtsv tqqaavstav qsspenfvek
     1081 stqaessqrs pcepaaeatv lkqegkvpsr lalgnrggyn grcwgspvrq kkkhtgmasi
     1141 dssapettsd ssptlsrrpl rggwattswg rgqdsdsiss sssdslgsss ssgsrrasgg
     1201 araktvevgr ykgrrlesha phvpnqpsea aahfyfelak tvlikaggns stsifthpss
     1261 sgghqgphrn lhlcafeigl yalglhnfvs pnwlsrtyss hvswitgqam eigsaalnil
     1321 vecwdghltp pevasladra srardsnmvr aaaelalscl phahalnpne iqralvqcke
     1381 qdnlmlekac maveeaakgg gvypevlfev ahqwywlyeq tvggtqrega tgcsagaara
     1441 vseaarglad srvtsepttv tvaaavtaaa tvmpvisvgs tmyqqhtvag pamahthtqg
     1501 lhpyttlqth ipcnpqyigh tiqhmprpav fpvpgsaypq gvhpafigaq ypysvtapsl
     1561 aatavsfpgv pvpsmtqiav hpyhsetgls lssnvalgsv hagstfpaiq gaslttlssq
     1621 pnslvtggfp aedeqhsqpv spqglhylhs ayrvgmlale mlgrrahndh pnnfsrsppy
     1681 tedvkwllgl aaklgvnyvh qfcvgaakgv lspfvlqeii mealqrlnpa hvhnhlrtpa
     1741 fhqlvqrcqq aymqyihhrl ihltpadydd fvnairsars afcltpmgvm qfndilqnlk
     1801 rskqtkelwq rvslemttfs p
//
LOCUS       XP_041332071            1820 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger SWIM domain-containing protein 8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332071
VERSION     XP_041332071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1820
                     /product="zinc finger SWIM domain-containing protein 8
                     isoform X2"
                     /calculated_mol_wt=198763
     Region          106..>247
                     /region_name="SWIM"
                     /note="Uncharacterized protein, contains SWIM-type Zn
                     finger domain [Function unknown]; COG4715"
                     /db_xref="CDD:443750"
     Region          1715..>1812
                     /region_name="Ins_allergen_rp"
                     /note="Insect allergen related repeat, nitrile-specifier
                     detoxification; pfam06757"
                     /db_xref="CDD:462003"
     CDS             1..1820
                     /gene="ZSWIM8"
                     /coded_by="XM_041476137.1:17..5479"
                     /db_xref="GeneID:121358184"
ORIGIN      
        1 melmfaewed gerfsfedsd rfeedslcsf iseaeslcqn wrgwrkqsag pnsptvkmkd
       61 glviplvels akqvafhipf evvekvyppv peqlqlriaf wsfpeneedi rlysclangs
      121 adefqrgeql frvravkdpl qigfhlsatv vppqmvppkg aynvavmfdr critscsctc
      181 gagakwcahv valclfrihn asavclrapv seslsrlqrd qlqkfaqyli selpqqilpt
      241 aqrlldells sqstaintvc gapdptagps asdqstwyld estlsdnikk tlhkfcgptp
      301 vvfsdvnsmy lssteppaaa ewaclrrplr grepegiwnl lsivremfkr rdsnaaplle
      361 iltdqclnye qitgwwysvr tsashssasg htgrssgqse vaahacasmc demvvlwrla
      421 vldptispqr rrdlcsqlrq wqlkvidnvk rgqhkkslek lfqgfkpave acyfsweeay
      481 pipgitysst dkknsfcwvk aiqqrscrlq cvesaceagr thgqelggpc lqpgdrlrps
      541 pqepavrpke ltgkrkvvse tpqrvlrrls aegdkavykt avskaklpvs kgltskhsgk
      601 rrmssedssl epdlaemsld dsslalgaea sntfsftesp lsrsyrdafe edggvyfseg
      661 peptlrsssm akkppkdpvg emgsgdddlp sadensggms lkpeevgeng aagggddgee
      721 eddyqvyyln pqevakeddd kaeggieeeq difagikple qenrmeilfa caealyahgy
      781 sneacrltve lardllanpp dlkveqpptk gkknkvstsk qtwmatntls kaaflltvls
      841 erleyhnlaf qigmfalelq rppastkale vklayqesei aallkkiplg tnemntirgr
      901 aeelregtlc dyrpvlplml asfifdvlct pvvsptgsrp psrnwnnemp gdeelgfeaa
      961 vaalgmkttv seaehpllce gtrrekgdla lalmitykdd qsklkkildk lldresqthk
     1021 pqtlssfyss skpavanqks pskhaaqsaa aiqqlpgtsv tqqaavstav qsspenfvek
     1081 stqessqrsp cepaaeatvl kqegkvpsrl algnrggyng rcwgspvrqk kkhtgmasid
     1141 ssapettsds sptlsrrplr ggwattswgr gqdsdsisss ssdslgssss sgsrrasgga
     1201 raktvevgry kgrrleshap hvpnqpseaa ahfyfelakt vlikaggnss tsifthpsss
     1261 gghqgphrnl hlcafeigly alglhnfvsp nwlsrtyssh vswitgqame igsaalnilv
     1321 ecwdghltpp evasladras rardsnmvra aaelalsclp hahalnpnei qralvqckeq
     1381 dnlmlekacm aveeaakggg vypevlfeva hqwywlyeqt vggtqregat gcsagaarav
     1441 seaarglads rvtsepttvt vaaavtaaat vmpvisvgst myqqhtvagp amahthtqgl
     1501 hpyttlqthi pcnpqyight iqhmprpavf pvpgsaypqg vhpafigaqy pysvtapsla
     1561 atavsfpgvp vpsmtqiavh pyhsetglsl ssnvalgsvh agstfpaiqg aslttlssqp
     1621 nslvtggfpa edeqhsqpvs pqglhylhsa yrvgmlalem lgrrahndhp nnfsrsppyt
     1681 edvkwllgla aklgvnyvhq fcvgaakgvl spfvlqeiim ealqrlnpah vhnhlrtpaf
     1741 hqlvqrcqqa ymqyihhrli hltpadyddf vnairsarsa fcltpmgvmq fndilqnlkr
     1801 skqtkelwqr vslemttfsp
//
LOCUS       XP_041332080            1723 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger SWIM domain-containing protein 8 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332080
VERSION     XP_041332080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1723
                     /product="zinc finger SWIM domain-containing protein 8
                     isoform X3"
                     /calculated_mol_wt=188365
     Region          106..>247
                     /region_name="SWIM"
                     /note="Uncharacterized protein, contains SWIM-type Zn
                     finger domain [Function unknown]; COG4715"
                     /db_xref="CDD:443750"
     Region          1618..>1715
                     /region_name="Ins_allergen_rp"
                     /note="Insect allergen related repeat, nitrile-specifier
                     detoxification; pfam06757"
                     /db_xref="CDD:462003"
     CDS             1..1723
                     /gene="ZSWIM8"
                     /coded_by="XM_041476146.1:17..5188"
                     /db_xref="GeneID:121358184"
ORIGIN      
        1 melmfaewed gerfsfedsd rfeedslcsf iseaeslcqn wrgwrkqsag pnsptvkmkd
       61 glviplvels akqvafhipf evvekvyppv peqlqlriaf wsfpeneedi rlysclangs
      121 adefqrgeql frvravkdpl qigfhlsatv vppqmvppkg aynvavmfdr critscsctc
      181 gagakwcahv valclfrihn asavclrapv seslsrlqrd qlqkfaqyli selpqqilpt
      241 aqrlldells sqstaintvc gapdptagps asdqstwyld estlsdnikk tlhkfcgptp
      301 vvfsdvnsmy lssteppaaa ewaclrrplr grepegiwnl lsivremfkr rdsnaaplle
      361 iltdqclnye qitgwwysvr tsashssasg htgrssgqse vaahacasmc demvvlwrla
      421 vldptispqr rrdlcsqlrq wqlkvidnvk rgqhkkslek lfqgfkpave acyfsweeay
      481 pipgitysst dkknsfcwvk aiqqrscrlq cvesaceagr thgqelggpc lqpgdrlrps
      541 pqepavrpke ltgkrkvvse tpqrvlrrls aegdkavykt avskaklpvs kgltskhsgk
      601 rrmssedssl epdlaemsld dsslalgaea sntfsftesp lsrsyrdafe edggvyfseg
      661 peptlrsssm akkppkdpvg emgsgdddlp sadensggms lkpeevgeng aagggddgee
      721 eddyqvyyln pqevakeddd kaeggieeeq difagikple qenrmeilfa caealyahgy
      781 sneacrltve lardllanpp dlkveqpptk gkknkvstsk qtwmatntls kaaflltvls
      841 erleyhnlaf qigmfalelq rppastkale vklayqesei aallkkiplg tnemntirgr
      901 aeelregtlc dyrpvlplml asfifdvlct pvvsptgsrp psrnwnnemp gdeelgfeaa
      961 vaalgmkttv seaehpllce gtrrekgdla lalmitykdd qsklkkildk lldresqthk
     1021 pqtlssfyss skpavanqks pskhaaqsaa aiqqlpgtsv tqqaavstav qsspenfvek
     1081 stqaessqrs pcepaaeatv lkqegkvpsr lalgnrggyn grcwgspvrq kkkhtgmasi
     1141 dssapettsd ssptlsrrpl rggwattswg rgqdsdsiss sssdslgsss ssgsrrasgg
     1201 araktvevgr ykgrrlesha phvpnqpsea aahfyfelak tvlikaggns stsifthpss
     1261 sgghqgphrn lhlcafeigl yalglhnfvs pnwlsrtyss hvswitgqam eigsaalnil
     1321 vecwdghltp pevasladra srardsnmvr aaaelalscl phahalnpne iqralvqcke
     1381 qdnlmlekac maveeaakgg gvypevlfev ahqwywlyeq tvggtqrega tgcsagaara
     1441 vseaarglad srvtsepttv tvaaavtaaa tvmpvisvgs tmyqqhtvag pamahthtqg
     1501 lhpyttlqth ipcnpqyigh tiqhmprpav fpvpgsaypq gvhpafigaq ypysvtapsl
     1561 aatavsfpgv pvpsmtqiav hpyhsetgls lssnvacvny vhqfcvgaak gvlspfvlqe
     1621 iimealqrln pahvhnhlrt pafhqlvqrc qqaymqyihh rlihltpady ddfvnairsa
     1681 rsafcltpmg vmqfndilqn lkrskqtkel wqrvslemtt fsp
//
LOCUS       XP_041332089            1466 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger SWIM domain-containing protein 8 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332089
VERSION     XP_041332089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1466
                     /product="zinc finger SWIM domain-containing protein 8
                     isoform X4"
                     /calculated_mol_wt=159090
     Region          1361..>1458
                     /region_name="Ins_allergen_rp"
                     /note="Insect allergen related repeat, nitrile-specifier
                     detoxification; pfam06757"
                     /db_xref="CDD:462003"
     CDS             1..1466
                     /gene="ZSWIM8"
                     /coded_by="XM_041476155.1:135..4535"
                     /db_xref="GeneID:121358184"
ORIGIN      
        1 mrcwpqhgst elfllqitgw wysvrtsash ssasghtgrs sgqsevaaha casmcdemvv
       61 lwrlavldpt ispqrrrdlc sqlrqwqlkv idnvkrgqhk ksleklfqgf kpaveacyfs
      121 weeaypipgi tysstdkkns fcwvkaiqqr scrlqcvesa ceagrthgqe lggpclqpgd
      181 rlrpspqepa vrpkeltgkr kvvsetpqrv lrrlsaegdk avyktavska klpvskglts
      241 khsgkrrmss edsslepdla emslddssla lgaeasntfs ftesplsrsy rdafeedggv
      301 yfsegpeptl rsssmakkpp kdpvgemgsg dddlpsaden sggmslkpee vgengaaggg
      361 ddgeeeddyq vyylnpqeva kedddkaegg ieeeqdifag ikpleqenrm eilfacaeal
      421 yahgysneac rltvelardl lanppdlkve qpptkgkknk vstskqtwma tntlskaafl
      481 ltvlserley hnlafqigmf alelqrppas tkalevklay qeseiaallk kiplgtnemn
      541 tirgraeelr egtlcdyrpv lplmlasfif dvlctpvvsp tgsrppsrnw nnempgdeel
      601 gfeaavaalg mkttvseaeh pllcegtrre kgdlalalmi tykddqsklk kildklldre
      661 sqthkpqtls sfyssskpav anqkspskha aqsaaaiqql pgtsvtqqaa vstavqsspe
      721 nfvekstqae ssqrspcepa aeatvlkqeg kvpsrlalgn rggyngrcwg spvrqkkkht
      781 gmasidssap ettsdssptl srrplrggwa ttswgrgqds dsisssssds lgsssssgsr
      841 rasggarakt vevgrykgrr leshaphvpn qpseaaahfy felaktvlik aggnsstsif
      901 thpsssgghq gphrnlhlca feiglyalgl hnfvspnwls rtysshvswi tgqameigsa
      961 alnilvecwd ghltppevas ladrasrard snmvraaael alsclphaha lnpneiqral
     1021 vqckeqdnlm lekacmavee aakgggvype vlfevahqwy wlyeqtvggt qregatgcsa
     1081 gaaravseaa rgladsrvts epttvtvaaa vtaaatvmpv isvgstmyqq htvagpamah
     1141 thtqglhpyt tlqthipcnp qyightiqhm prpavfpvpg saypqgvhpa figaqypysv
     1201 tapslaatav sfpgvpvpsm tqiavhpyhs etglslssnv algsvhagst fpaiqgaslt
     1261 tlssqpnslv tggfpaedeq hsqpvspqgl hylhsayrvg mlalemlgrr ahndhpnnfs
     1321 rsppytedvk wllglaaklg vnyvhqfcvg aakgvlspfv lqeiimealq rlnpahvhnh
     1381 lrtpafhqlv qrcqqaymqy ihhrlihltp adyddfvnai rsarsafclt pmgvmqfndi
     1441 lqnlkrskqt kelwqrvsle mttfsp
//
LOCUS       XP_041332099             879 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332099
VERSION     XP_041332099.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476165.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="bifunctional heparan sulfate
                     N-deacetylase/N-sulfotransferase 2"
                     /calculated_mol_wt=101297
     Region          80..510
                     /region_name="HSNSD"
                     /note="heparan sulfate-N-deacetylase; pfam12062"
                     /db_xref="CDD:463450"
     Region          599..850
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..879
                     /gene="NDST2"
                     /coded_by="XM_041476165.1:756..3395"
                     /db_xref="GeneID:121358204"
ORIGIN      
        1 miqlwkvvrh vrqlelhrli llliafslis mcilayyvtn spkikepppl pfsdcssqhr
       61 ilippqaswr ltksvdtsrt dpvvlvfves iysqlgqeiv ailessrfky rteiapgkgd
      121 mptltdkdrg ryaliiyeni lkyvnldawn relldkycve ygvgiigffk anensllsaq
      181 lkgfplflhs nlglrdyhin psapllyvtr aneveqgplp gddwtvfqsn hstyepvlla
      241 stkssesiph lathkalhat vmqdlglhdg iqrvlfgnnl nfwlhklifv daiayltgkr
      301 lcltldryil vdiddifvgk egtrmkvsdv eallstqskl rtlvpnftfn lgfsgkfyht
      361 gtdeedegdd mllkhrkefw wfphmwshmq phlfhnvtvl aeqmklnkqf avehgiptdl
      421 gyavaphhsg vypvhtqlye awksvwsiqv tsteeyphlr paryrrgfih ngimvlprqt
      481 cglfthtify neypggskel dksirggelf ltvllnpisi fmthlsnygn drlglytfes
      541 lvkfvqcwtn lrlqtlppvq lakkyfeifp qeknplwqnp cddkrhkdiw skektcdrlp
      601 kflivgpqkt gttavhfflt mhpavtsnfp spstfeeiqf fngpnyhkgi dwymeffpip
      661 snastdfmfe ksanyfdtev vpkrgaallp rakiitvlin padrayswyq hqrahndpva
      721 lnytfyqvis aksqapqelr nlqsrclfpg cysthlerwl tyypsgqlli vdgqelrhnp
      781 asvmdniqkf lgvtplfnyt qalrfdeakg fwcqlldggk tkclgkskgr kypdmdslsr
      841 lflrdfyreh nielsklmnr lgqplptwlr eelqnssws
//
LOCUS       XP_041332109             879 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332109
VERSION     XP_041332109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="bifunctional heparan sulfate
                     N-deacetylase/N-sulfotransferase 2"
                     /calculated_mol_wt=101297
     Region          80..510
                     /region_name="HSNSD"
                     /note="heparan sulfate-N-deacetylase; pfam12062"
                     /db_xref="CDD:463450"
     Region          599..850
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..879
                     /gene="NDST2"
                     /coded_by="XM_041476175.1:645..3284"
                     /db_xref="GeneID:121358204"
ORIGIN      
        1 miqlwkvvrh vrqlelhrli llliafslis mcilayyvtn spkikepppl pfsdcssqhr
       61 ilippqaswr ltksvdtsrt dpvvlvfves iysqlgqeiv ailessrfky rteiapgkgd
      121 mptltdkdrg ryaliiyeni lkyvnldawn relldkycve ygvgiigffk anensllsaq
      181 lkgfplflhs nlglrdyhin psapllyvtr aneveqgplp gddwtvfqsn hstyepvlla
      241 stkssesiph lathkalhat vmqdlglhdg iqrvlfgnnl nfwlhklifv daiayltgkr
      301 lcltldryil vdiddifvgk egtrmkvsdv eallstqskl rtlvpnftfn lgfsgkfyht
      361 gtdeedegdd mllkhrkefw wfphmwshmq phlfhnvtvl aeqmklnkqf avehgiptdl
      421 gyavaphhsg vypvhtqlye awksvwsiqv tsteeyphlr paryrrgfih ngimvlprqt
      481 cglfthtify neypggskel dksirggelf ltvllnpisi fmthlsnygn drlglytfes
      541 lvkfvqcwtn lrlqtlppvq lakkyfeifp qeknplwqnp cddkrhkdiw skektcdrlp
      601 kflivgpqkt gttavhfflt mhpavtsnfp spstfeeiqf fngpnyhkgi dwymeffpip
      661 snastdfmfe ksanyfdtev vpkrgaallp rakiitvlin padrayswyq hqrahndpva
      721 lnytfyqvis aksqapqelr nlqsrclfpg cysthlerwl tyypsgqlli vdgqelrhnp
      781 asvmdniqkf lgvtplfnyt qalrfdeakg fwcqlldggk tkclgkskgr kypdmdslsr
      841 lflrdfyreh nielsklmnr lgqplptwlr eelqnssws
//
LOCUS       XP_041332119             879 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332119
VERSION     XP_041332119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="bifunctional heparan sulfate
                     N-deacetylase/N-sulfotransferase 2"
                     /calculated_mol_wt=101297
     Region          80..510
                     /region_name="HSNSD"
                     /note="heparan sulfate-N-deacetylase; pfam12062"
                     /db_xref="CDD:463450"
     Region          599..850
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..879
                     /gene="NDST2"
                     /coded_by="XM_041476185.1:750..3389"
                     /db_xref="GeneID:121358204"
ORIGIN      
        1 miqlwkvvrh vrqlelhrli llliafslis mcilayyvtn spkikepppl pfsdcssqhr
       61 ilippqaswr ltksvdtsrt dpvvlvfves iysqlgqeiv ailessrfky rteiapgkgd
      121 mptltdkdrg ryaliiyeni lkyvnldawn relldkycve ygvgiigffk anensllsaq
      181 lkgfplflhs nlglrdyhin psapllyvtr aneveqgplp gddwtvfqsn hstyepvlla
      241 stkssesiph lathkalhat vmqdlglhdg iqrvlfgnnl nfwlhklifv daiayltgkr
      301 lcltldryil vdiddifvgk egtrmkvsdv eallstqskl rtlvpnftfn lgfsgkfyht
      361 gtdeedegdd mllkhrkefw wfphmwshmq phlfhnvtvl aeqmklnkqf avehgiptdl
      421 gyavaphhsg vypvhtqlye awksvwsiqv tsteeyphlr paryrrgfih ngimvlprqt
      481 cglfthtify neypggskel dksirggelf ltvllnpisi fmthlsnygn drlglytfes
      541 lvkfvqcwtn lrlqtlppvq lakkyfeifp qeknplwqnp cddkrhkdiw skektcdrlp
      601 kflivgpqkt gttavhfflt mhpavtsnfp spstfeeiqf fngpnyhkgi dwymeffpip
      661 snastdfmfe ksanyfdtev vpkrgaallp rakiitvlin padrayswyq hqrahndpva
      721 lnytfyqvis aksqapqelr nlqsrclfpg cysthlerwl tyypsgqlli vdgqelrhnp
      781 asvmdniqkf lgvtplfnyt qalrfdeakg fwcqlldggk tkclgkskgr kypdmdslsr
      841 lflrdfyreh nielsklmnr lgqplptwlr eelqnssws
//
LOCUS       XP_041332130             879 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332130
VERSION     XP_041332130.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476196.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="bifunctional heparan sulfate
                     N-deacetylase/N-sulfotransferase 2"
                     /calculated_mol_wt=101297
     Region          80..510
                     /region_name="HSNSD"
                     /note="heparan sulfate-N-deacetylase; pfam12062"
                     /db_xref="CDD:463450"
     Region          599..850
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..879
                     /gene="NDST2"
                     /coded_by="XM_041476196.1:677..3316"
                     /db_xref="GeneID:121358204"
ORIGIN      
        1 miqlwkvvrh vrqlelhrli llliafslis mcilayyvtn spkikepppl pfsdcssqhr
       61 ilippqaswr ltksvdtsrt dpvvlvfves iysqlgqeiv ailessrfky rteiapgkgd
      121 mptltdkdrg ryaliiyeni lkyvnldawn relldkycve ygvgiigffk anensllsaq
      181 lkgfplflhs nlglrdyhin psapllyvtr aneveqgplp gddwtvfqsn hstyepvlla
      241 stkssesiph lathkalhat vmqdlglhdg iqrvlfgnnl nfwlhklifv daiayltgkr
      301 lcltldryil vdiddifvgk egtrmkvsdv eallstqskl rtlvpnftfn lgfsgkfyht
      361 gtdeedegdd mllkhrkefw wfphmwshmq phlfhnvtvl aeqmklnkqf avehgiptdl
      421 gyavaphhsg vypvhtqlye awksvwsiqv tsteeyphlr paryrrgfih ngimvlprqt
      481 cglfthtify neypggskel dksirggelf ltvllnpisi fmthlsnygn drlglytfes
      541 lvkfvqcwtn lrlqtlppvq lakkyfeifp qeknplwqnp cddkrhkdiw skektcdrlp
      601 kflivgpqkt gttavhfflt mhpavtsnfp spstfeeiqf fngpnyhkgi dwymeffpip
      661 snastdfmfe ksanyfdtev vpkrgaallp rakiitvlin padrayswyq hqrahndpva
      721 lnytfyqvis aksqapqelr nlqsrclfpg cysthlerwl tyypsgqlli vdgqelrhnp
      781 asvmdniqkf lgvtplfnyt qalrfdeakg fwcqlldggk tkclgkskgr kypdmdslsr
      841 lflrdfyreh nielsklmnr lgqplptwlr eelqnssws
//
LOCUS       XP_041332140             879 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332140
VERSION     XP_041332140.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476206.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="bifunctional heparan sulfate
                     N-deacetylase/N-sulfotransferase 2"
                     /calculated_mol_wt=101297
     Region          80..510
                     /region_name="HSNSD"
                     /note="heparan sulfate-N-deacetylase; pfam12062"
                     /db_xref="CDD:463450"
     Region          599..850
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..879
                     /gene="NDST2"
                     /coded_by="XM_041476206.1:566..3205"
                     /db_xref="GeneID:121358204"
ORIGIN      
        1 miqlwkvvrh vrqlelhrli llliafslis mcilayyvtn spkikepppl pfsdcssqhr
       61 ilippqaswr ltksvdtsrt dpvvlvfves iysqlgqeiv ailessrfky rteiapgkgd
      121 mptltdkdrg ryaliiyeni lkyvnldawn relldkycve ygvgiigffk anensllsaq
      181 lkgfplflhs nlglrdyhin psapllyvtr aneveqgplp gddwtvfqsn hstyepvlla
      241 stkssesiph lathkalhat vmqdlglhdg iqrvlfgnnl nfwlhklifv daiayltgkr
      301 lcltldryil vdiddifvgk egtrmkvsdv eallstqskl rtlvpnftfn lgfsgkfyht
      361 gtdeedegdd mllkhrkefw wfphmwshmq phlfhnvtvl aeqmklnkqf avehgiptdl
      421 gyavaphhsg vypvhtqlye awksvwsiqv tsteeyphlr paryrrgfih ngimvlprqt
      481 cglfthtify neypggskel dksirggelf ltvllnpisi fmthlsnygn drlglytfes
      541 lvkfvqcwtn lrlqtlppvq lakkyfeifp qeknplwqnp cddkrhkdiw skektcdrlp
      601 kflivgpqkt gttavhfflt mhpavtsnfp spstfeeiqf fngpnyhkgi dwymeffpip
      661 snastdfmfe ksanyfdtev vpkrgaallp rakiitvlin padrayswyq hqrahndpva
      721 lnytfyqvis aksqapqelr nlqsrclfpg cysthlerwl tyypsgqlli vdgqelrhnp
      781 asvmdniqkf lgvtplfnyt qalrfdeakg fwcqlldggk tkclgkskgr kypdmdslsr
      841 lflrdfyreh nielsklmnr lgqplptwlr eelqnssws
//
LOCUS       XP_041332154             227 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich melanocyte differentiation-associated protein
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332154
VERSION     XP_041332154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..227
                     /product="leucine-rich melanocyte
                     differentiation-associated protein"
                     /calculated_mol_wt=25852
     Region          34..57
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          58..103
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <79..159
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     CDS             1..227
                     /gene="LRMDA"
                     /coded_by="XM_041476220.1:79..762"
                     /db_xref="GeneID:121358215"
ORIGIN      
        1 magvvvsgaq vsyisqdcee ipeflgrkyg rmakrldlsf nllrsleglk tfsyleelil
       61 dnnllgndll lprlphlhtl tlnknqitel eslldhlaev vpslqylsll gniacpnelv
      121 ckekdeddyq ryryfvlhkl tnlkfldtrk vtrrereeal irgafmkvvk pkdassaaap
      181 aspemhytpl psgsrdltnh rgilgkcryi yygkhsegnr firddql
//
LOCUS       XP_041332168             509 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein B-H1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041332168
VERSION     XP_041332168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476234.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="homeobox protein B-H1-like"
                     /calculated_mol_wt=53978
     Region          153..207
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..509
                     /gene="LOC121358223"
                     /coded_by="XM_041476234.1:361..1890"
                     /db_xref="GeneID:121358223"
ORIGIN      
        1 mtmevwetal shprsrrgag pggwgslkag veafkarscq crytarrprp awsslaclpp
       61 acsppawplp aspppawppa pdppvsragr agggglggga ggsvggscvg ggvggvgagg
      121 rcrapltaap rslpagepra rpagpssgre ggrrkrttfs kaqlellvra fekepypgia
      181 lreqlssltn ipesriqvwf qnrrarqlnh kkceaaayar pskpkpprca gqeqpraqqr
      241 pgternllcp qpglpggsqs fggqppfysg qpysrldmhf rsldntfgal gqtpadfgld
      301 csgrgvplga gsvgsappfs lpvqqaqeyp ylkksfpegc ysdadvfqpc tdhqhpaake
      361 nmyrkpvlny csanqglgve nclyaksstp pfgkgstcsf dggepklepe qmrhssplla
      421 asnaspplvl pkheggyqta latpaplyeq qlletvndyd phwlgmrnei lgigldllfe
      481 neqnmeqgqt ksylsafggq nsvcqlgqt
//
LOCUS       XP_041332206             629 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ecdysoneless homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041332206
VERSION     XP_041332206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476272.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="protein ecdysoneless homolog"
                     /calculated_mol_wt=69444
     Region          14..588
                     /region_name="SGT1"
                     /note="SGT1 protein; pfam07093"
                     /db_xref="CDD:462089"
     CDS             1..629
                     /gene="ECD"
                     /coded_by="XM_041476272.1:34..1923"
                     /db_xref="GeneID:121358232"
ORIGIN      
        1 mealrrpalp edtvryrlfa aaaagpggea llrrcaelal vrfapllaay vwqrepfrlr
       61 yvprrgepga grearreerg dcegdpaagn rervigsvqg iddndgefll ieaadflpkw
      121 lnpensenrv ffykgelhii ppwepseqgw alsapcptvp qalallstrs eeflaaepir
      181 aaldkrihgy pekiqaslhr arcflpagia avlrlrpslv aaavqafylr dpsdlgacrr
      241 pfrtfpaeqr vmalvtftrc lyaqlvqqqf vpdrrsgytl papshpqyra yelgmklahg
      301 femlcskssk vapdakrnvv sgplwerflr slkekdyfkg emegsakyle llhmaedhfq
      361 qsvavpessd evspgdeila llqttpidlk efereaaclp aedddswldi tpdaldqmlk
      421 etrneslpst neeeqnydle tvaesmkafv skvsthegae mpwssdeshv tfdvdsftka
      481 ldrilgadse eldsddvdee eefgfsdedd edldagnqrq eqkvspeelv gslkaymkem
      541 drelaqtnvg ksftshkrga ssvgvatses agpdsgaeaa elapvdvdmn lvanllesys
      601 aqaglagpts nilqslgvnl penteltgs
//
LOCUS       XP_041332219             295 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 511 [Pyrgilauda ruficollis].
ACCESSION   XP_041332219
VERSION     XP_041332219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476285.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="zinc finger protein 511"
                     /calculated_mol_wt=33173
     Region          113..131
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(117..119,121..122,126,130,140,143..147,149..150)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          135..152
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..295
                     /gene="ZNF511"
                     /coded_by="XM_041476285.1:1..888"
                     /db_xref="GeneID:121358237"
ORIGIN      
        1 mrggrrgnlg sapprmrtap prrramlplp prlglvlreg lpplpqdpps ppaprpappf
       61 tfaprrlrlg pqhplfedgd vhrhlylqgv ltsleevper pkvsefschi sgcsqvfdtl
      121 esyehhyntl hrnvcsfckr sfpsgnlldi hilewhdslf qimaekqnmy qclvegctek
      181 fksskdrkdh lvtvhlypad frfdrpkkvk sgskhmsspm eqgtsvpmdv svemaeqfqv
      241 npmetgpeen meisqpaasp gpplpekrly ksripsticf gqgatrgfkg prkkv
//
LOCUS       XP_041332233             446 aa            linear   VRT 06-MAY-2021
DEFINITION  putative lysosomal acid lipase/cholesteryl ester hydrolase
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332233
VERSION     XP_041332233.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476299.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="putative lysosomal acid lipase/cholesteryl ester
                     hydrolase"
                     /calculated_mol_wt=50848
     Region          49..439
                     /region_name="PLN02872"
                     /note="triacylglycerol lipase"
                     /db_xref="CDD:215470"
     CDS             1..446
                     /gene="LOC121358240"
                     /coded_by="XM_041476299.1:1..1341"
                     /db_xref="GeneID:121358240"
ORIGIN      
        1 mpndsiswnq pichssqlfp aprehsqagr lspagadssp qsttmwlflt iscfmlvaak
       61 seenpevsmd vgeivryhgy pyeehevlte dgyyltlqri phgrdnpesf slphkagaqa
      121 snmfcpppka vvllqhglvl egsnwvtnlp ntslgfilad agydvwigns rgnswsrkhq
      181 efefhqqeys aysfhemamy dlpasinyil ektgqeqlyy vaysqgtttg fiafssipel
      241 drkikmffal apitvnsnmk splvrvfdlp ealikiilgq tvvfdkdevl kqvisrmciy
      301 pilktvcslv fylpggftns lnvsrmdvyl arypdstslk nmlhwrqlyq tgefkhydyg
      361 sdnvlhynqt tppfyelenm ktplaawygg kdwisapedv nitlprisnv aykkyipefv
      421 hfdflwgkqv yeqvykemld lmekgt
//
LOCUS       XP_041332246             393 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: putative lysosomal acid lipase/cholesteryl
            ester hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041332246
VERSION     XP_041332246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476312.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="LOW QUALITY PROTEIN: putative lysosomal acid
                     lipase/cholesteryl ester hydrolase"
                     /calculated_mol_wt=44270
     Region          34..354
                     /region_name="PLN02872"
                     /note="triacylglycerol lipase"
                     /db_xref="CDD:215470"
     Region          <323..387
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..393
                     /gene="LOC121358248"
                     /coded_by="XM_041476312.1:1..1182"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121358248"
ORIGIN      
        1 mwlllvalcl aqgledaipd aevfhnperf mnvsqkilfh gysseeyevv tedgyflsln
       61 riphgkggag lagprtpvli vhgfclgggd wvdnlpensl afiladaghn vwignnrgss
      121 wsrrhrslsv asqefwdfsf hemamydlpa mvgfilmqte qeqlfyigha qgsslgfivf
      181 sslphlakki klffalapvy tlrharcpvl klaflpdlll ketfgtrelv vvprkeklll
      241 aekcsrplea gvcansiflv ggydrhnlnt srldvyissf pdytsvknll hwgqtaktak
      301 fkqldyglrn mekynqlrpp fyqieavrvp valwsgghdg vtpreeaqrl lahltnvvhh
      361 ehfptgnhfn hhwglnapqr vcqrivamme enp
//
LOCUS       XP_041332258             425 aa            linear   VRT 06-MAY-2021
DEFINITION  lipase member K-like [Pyrgilauda ruficollis].
ACCESSION   XP_041332258
VERSION     XP_041332258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476324.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 19% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="lipase member K-like"
                     /calculated_mol_wt=47543
     Region          16..418
                     /region_name="PLN02872"
                     /note="triacylglycerol lipase"
                     /db_xref="CDD:215470"
     CDS             1..425
                     /gene="LOC121358257"
                     /coded_by="XM_041476324.1:1..1278"
                     /db_xref="GeneID:121358257"
ORIGIN      
        1 mikekgtarm wldlalvsvf lgmaygecfl nspapknpea gmnisemvsf wgypseeydv
       61 vtedgyilql nriphgrgna gcqgvrpval lqhgllsegs swltnlpnss lgfiladagy
      121 dvwignsrgn twsrrhqvli ttqdefwafs fdemakydlp amisfieqkt gqkqlyyigh
      181 sqgttigfia fstmpqlark iklffalspv ttvifsqspf rklsffsdsg lkelfgtref
      241 lphtalgelv lsrfcvcskv ckrilatvfg fnwkntnmsr fdvymghtpa gssvqniihw
      301 lqgvhggalr afdgghvyns lhyrqgvhgg alrafdgghv ynslhyrqpg apfydvqtme
      361 vptaiwnagq dcladprdta lllpqvknlv hhkliphwnh mdfvlgldat evlyreildi
      421 mkkhp
//
LOCUS       XP_041332273             706 aa            linear   VRT 06-MAY-2021
DEFINITION  neutral ceramidase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041332273
VERSION     XP_041332273.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476339.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..706
                     /product="neutral ceramidase-like"
                     /calculated_mol_wt=77709
     Region          54..533
                     /region_name="Ceramidase_alk"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     N-terminal; pfam04734"
                     /db_xref="CDD:461415"
     Region          535..703
                     /region_name="Ceramidse_alk_C"
                     /note="Neutral/alkaline non-lysosomal ceramidase,
                     C-terminal; pfam17048"
                     /db_xref="CDD:465340"
     CDS             1..706
                     /gene="LOC121358262"
                     /coded_by="XM_041476339.1:50..2170"
                     /db_xref="GeneID:121358262"
ORIGIN      
        1 mpgkrsrcsf srlevilivc lvlmvsltva llvlhfltkn tddctnntae eakyllgvgr
       61 adctgpvaqv plmgyanpeq vgggllsrly srafivaepe gskrvvfvsa digmvsqrvr
      121 levlkqlrsk ygelyrqdnv ilsgththsg pagyfqytlf witskgliqp alssivngiv
      181 ksidiahenm krgrlfinrg tvensqinrs pfsylanpes erkryssntd kemvllkmvd
      241 enghelglis wfavhpvsmn nsnhlvnsdn vgyasylfeq eknkgmlpge gsfvaafass
      301 nlgdvspntr gpfcantges cdnpqstcpv ggatmcmakg pgndmfestr iigqniylka
      361 kelyekasqe vtgplssahq wvkmsnvsve lnathtvktc kpalghsfaa gtidgvgafn
      421 ftqgsvegdp fwdqirdqll gepsnettac hkpkpilfnt gevrthltms grrlreavqr
      481 efnshgtsgm nvviaglcnv ythyittyee yqvqryeaas tiygphtlsa yiqlyrglak
      541 aialnatqel spgpepplfn vtkltllpsl gtenapankn fgdvleevrp eyrerevaev
      601 tfvganprns aenatehnfl tverysniss swhvvlndas wdtrfywskg slgqsnvtie
      661 whipagtepg vyrlryfghy kkrvaflrvi svpfegsssa fqitap
//
LOCUS       XP_041332285             627 aa            linear   VRT 06-MAY-2021
DEFINITION  APOBEC1 complementation factor [Pyrgilauda ruficollis].
ACCESSION   XP_041332285
VERSION     XP_041332285.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476351.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="APOBEC1 complementation factor"
                     /calculated_mol_wt=69153
     Region          72..627
                     /region_name="hnRNP-R-Q"
                     /note="heterogeneous nuclear ribonucleoprotein R, Q
                     family; TIGR01648"
                     /db_xref="CDD:273732"
     CDS             1..627
                     /gene="A1CF"
                     /coded_by="XM_041476351.1:1..1884"
                     /db_xref="GeneID:121358269"
ORIGIN      
        1 mssltaqrvt kerhhfttsn ccrfkvsswe akiaeqeale scgvtaspls phrakatlri
       61 hrpfpersqg rengqrkygg pppgwdgppp ergceifigk lprdlfedel iplcekigki
      121 yemrmmmdfn gnnrgyafvt fsnkqeakna iktlnnyeir ngrllgvcas vdncrlfvgg
      181 ipktkkreei laemkkvtdg vvdvivypsa adktknrgfa fveyeshraa amarrkllpg
      241 riqlwghpia vdwaepevev dedtmssvki lyvrnlmlst teetiekefn sikpgaverv
      301 kkirdyafvh fnkrehavea mkalngkvld gspievtlak pvdkdsyvry trgtggrapv
      361 lqgdytytlg hlydpatayl gapvfyapqa yaaipslhfp aakglgnrsi lrppsvreiy
      421 mnvpvgaagv rglggrgyla fpglgrgyhl kgdkrgeekl ydllpgmelt pmnhvtlkpq
      481 giklapqile eicqknnwgq pvyqlhsaig qdqrqlflyk itipalasqn ptihpftppk
      541 lsayideakt yaaeytlqtl gipvegaevp paapafpgyt ianaaatvta tqlkqavtlg
      601 qdlatyatye aypafavaar sdgygaf
//
LOCUS       XP_041332297             288 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor A, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041332297
VERSION     XP_041332297.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476363.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="transcription factor A, mitochondrial"
                     /calculated_mol_wt=32032
     Region          73..135
                     /region_name="HMG_box"
                     /note="HMG (high mobility group) box; pfam00505"
                     /db_xref="CDD:459837"
     Region          73..>96
                     /region_name="HMG-box_SF"
                     /note="high mobility group (HMG)-box domain superfamily;
                     cl00082"
                     /db_xref="CDD:469606"
     Region          153..252
                     /region_name="HMG-box_TFAM_rpt2"
                     /note="second high mobility group (HMG)-box found in
                     mitochondrial transcription factor A (TFA) and similar
                     proteins; cd21987"
                     /db_xref="CDD:438803"
     Site            order(155,157..158,161..162,164..165,168,174..175,
                     177..178,180..181,184..185,188,196..197,200,204,207,226,
                     229,250..252)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438803"
     CDS             1..288
                     /gene="TFAM"
                     /coded_by="XM_041476363.1:31..897"
                     /db_xref="GeneID:121358277"
ORIGIN      
        1 maaaaallar aaglglglgl vtaaggrrll rcgtgaglrq rgtgslldga vvcraggaae
       61 rclsrgtssn qrpkrpltay frfvmdnrpa freknpailh ymcnasfvkl fcsrmvyeea
      121 iktdwkkyge qmaaykaqlt paqaaalkee rrkqlarrrs irakrelnll gkpkrarsgf
      181 niflsenfqe segnspvakl kklfdtwqkm sasqkqpylq laqddkvrye nemksweakm
      241 iergredlvr skkqrlrkkp aetakqteta kakasssgkk aklkksee
//
LOCUS       XP_041332309             637 aa            linear   VRT 06-MAY-2021
DEFINITION  rhotekin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332309
VERSION     XP_041332309.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476375.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..637
                     /product="rhotekin-2"
                     /calculated_mol_wt=71603
     Region          39..93
                     /region_name="HR1"
                     /note="Protein kinase C-related kinase homology region 1
                     (HR1) domain that binds Rho family small GTPases; cl00087"
                     /db_xref="CDD:469609"
     Region          119..269
                     /region_name="Anillin"
                     /note="Cell division protein anillin; pfam08174"
                     /db_xref="CDD:462393"
     Region          308..418
                     /region_name="PH_rhotekin2"
                     /note="Anillin Pleckstrin homology (PH) domain; cd13249"
                     /db_xref="CDD:270069"
     CDS             1..637
                     /gene="RTKN2"
                     /coded_by="XM_041476375.1:1..1914"
                     /db_xref="GeneID:121358284"
ORIGIN      
        1 miykrgtnle ekcknvrsqt lqkhvpnvle nwtlepaeeq ecdiqekisf evrmregick
       61 llaastqkeq llravkslmv cnarirayra qlqgrngepg pgraeeqsse ngtkdrmacr
      121 akvaisniri plmwkgsdhf skkeksqrya vfclfrmgae vfdtevtivd eavtdicfen
      181 vtifdeaspd fqvkvevysc cteeslyitn tpkklakklk tslskatgkk lkaaleedst
      241 epllpadpvi hgakysllay ttlglesaed nfrthnltit gneessfwlp lygnmccrlv
      301 vqpscmardm magflnqqqm vggltswrrl ycvlrggkll cyyspeeiea kvepaltvsi
      361 nketriravd kdskrrtnnf cvinpvsgeg vtqrfatdsr delhqwmeaf wqhfydlsqw
      421 khcceelmki eimsprkppl fltkeatsvy hdmsidspvk pegladiihr kieesdgefl
      481 lgqqkesasa lwaslfdgsh emtvqknmhl dskrdttspt dsrgkkrrap pppsdkspys
      541 aeaqvnteql gkenwrkpdh spassssles vlatkmqqlq tpiapprkig pcgksslagl
      601 gnpvslvskt ksetkpvptp kqkgiteild prswlhp
//
LOCUS       XP_041332321             404 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041332321
VERSION     XP_041332321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476387.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="coiled-coil domain-containing protein 6"
                     /calculated_mol_wt=46805
     Region          <33..268
                     /region_name="DUF2046"
                     /note="Uncharacterized conserved protein H4 (DUF2046);
                     pfam09755"
                     /db_xref="CDD:401633"
     CDS             1..404
                     /gene="CCDC6"
                     /coded_by="XM_041476387.1:1..1215"
                     /db_xref="GeneID:121358294"
ORIGIN      
        1 mksfkhfpvy nkyeeivifa hfgqkimedk lsqaraeqee efisntlfkk iqalqkeket
       61 lavnyekeee fltnelsrkl mqlqhekael eqhleqeqef qvnklmkkik klendtiskq
      121 ltleqlrrek idlentleqe qealvnrlwk rmdkleaekr ilqekldqpv sappsprdis
      181 meidspenmm rhirflknev erlkkqlraa qlqhsekmaq yleeerhmre enlrlqrklq
      241 remerrealc rqlsesessl emdderyfne msaqglrprt vsspipytps psssrpispg
      301 lsyashtvgf tpptsltrag msyynspglh vqhmgpshgi trpsprrsns pdkfkrptpp
      361 pspntqtpvq pppppppppv qppgqaaasq aanfqhsvhp ssqp
//
LOCUS       XP_041332334             189 aa            linear   VRT 06-MAY-2021
DEFINITION  pulmonary surfactant-associated protein A-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332334
VERSION     XP_041332334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476400.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..189
                     /product="pulmonary surfactant-associated protein A-like"
                     /calculated_mol_wt=20801
     Region          77..189
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(163,167,169,173,175..178,181..183)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153061"
     CDS             1..189
                     /gene="LOC121358300"
                     /coded_by="XM_041476400.1:1..570"
                     /db_xref="GeneID:121358300"
ORIGIN      
        1 mavafmyadh rtlpwtrnqp glplglndav staaqnlsnl tplagnehgd pihqleyris
       61 rlegalrlnk mitesggkif atngkkadfd atvekckeag gsiatptspg endailyfvk
      121 yfntyaylgi kqslipgrfq llngaqlsyt nwysnepsgk geeecvemyt dgtwndkkcn
      181 knhlivcqf
//
LOCUS       XP_041332355             523 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: zona pellucida sperm-binding protein 4-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332355
VERSION     XP_041332355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476421.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509210.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 9% of CDS bases
            frameshifts :: corrected 3 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..523
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..523
                     /product="LOW QUALITY PROTEIN: zona pellucida
                     sperm-binding protein 4-like"
                     /calculated_mol_wt=55997
     Region          135..175
                     /region_name="Trefoil"
                     /note="Trefoil (P-type) domain; pfam00088"
                     /db_xref="CDD:459666"
     Site            order(149,170..171)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:238059"
     Site            order(164,170)
                     /site_type="active"
                     /note="putative binding specificity loop [active]"
                     /db_xref="CDD:238059"
     Region          182..434
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..523
                     /gene="LOC121358315"
                     /coded_by="XM_041476421.1:1..1572"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 3 bases in 2 codons;
                     deleted 1 base in 1 codon"
                     /db_xref="GeneID:121358315"
ORIGIN      
        1 mklaevgtvt fltswdhgtl yscaakvgcg lrgkskgnas lrlscwdteg kahvlqndxg
       61 cgllvsgtpe gsrkvsvsya gcyvfewdhn ylilvglegt daagqkvlhe qmllrcsvdl
      121 pgktealgri fssvcsavps qdrlpcaslp isqgdcearg ccydprervk lcyfgntvta
      181 hctpdgqfsi avsrdvtxpp valdsvqlas ghstgcvpvl tnnvfvvyqf plsacgttfq
      241 mtgdqaiyen elvasrdvkt gslgsvtrds tfrlhvqcty sisgssvpls vqvfttteqv
      301 pplpalsqpg plslelhvas dgsytsycmd sdypvvetlr dplyvgvkil qrtdpdlilv
      361 lhlcwaapst npqqqqqwpl lvdgcpyagd syqtqlsclp sftlktrtrp vvylhcsalv
      421 chqsvkesci ttcpsrvmgk rstehpfqeg tshvsskgpv iflqdelrqd takdglgksv
      481 haaapwalgf aavatgtalc vvlvvsvlwq rkmsamhein glq
//
LOCUS       XP_041332372             737 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 34 [Pyrgilauda ruficollis].
ACCESSION   XP_041332372
VERSION     XP_041332372.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476438.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="F-box only protein 34"
                     /calculated_mol_wt=80355
     Region          599..646
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(602,606,609..610,613..614,618,620..621,625..627,629)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..737
                     /gene="FBXO34"
                     /coded_by="XM_041476438.1:424..2637"
                     /db_xref="GeneID:121358332"
ORIGIN      
        1 mksscraglh replnstsst fhqvkrvsgm hlkpylklqk kerspeisqd slrghqgpaq
       61 gekytnctkl svfpkpslvt psqkllgiiy pntmcnmngk gpadgpsare kknalsatih
      121 qgeegegpld vwavvkpgnt kekiaffaaq qcssstrtgs mkikstwdid grtakrrkks
      181 vdlkkakiql ermreansrc sqpepfacgi ehcsvhfgsd ggdgafpgrs lsviemvafl
      241 eqrasallvd caktctaapa trpgaqpkal pgpepfssaa aceapaergp gepqgepvrv
      301 ldmvarlese clrrqserea gslsrnnsfr rnvgrvllas gtqpegevgk gvpaqgdglg
      361 eagvaeagyg grcgplgdte lwdggasaqq pfpsgldsrv gnvssglaha vlamtagrnd
      421 aetrmeppra llslcppaar lppdplqskn atvdctskep vifpkhpark eplcisisvt
      481 kteegcrkek lsssgedslp grlfflqreq paahelqprr egpqekpgev aqnededala
      541 sgrscvrssv ptepsapsvp ptegalqvld psclkrqvsh dfletrfkiq qllepqqyma
      601 flphhiivki fgllptrslv alkctcyyfk fiieyynirp adsrwvrdpr yredpckqck
      661 kkyvkgdvsl crwhpkpycq alpygpgywm cchrsqkgip gcklglhdnh wvpachsfnr
      721 aihkktrgag aeveeey
//
LOCUS       XP_041332378             737 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 34 [Pyrgilauda ruficollis].
ACCESSION   XP_041332378
VERSION     XP_041332378.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476444.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="F-box only protein 34"
                     /calculated_mol_wt=80355
     Region          599..646
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(602,606,609..610,613..614,618,620..621,625..627,629)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..737
                     /gene="FBXO34"
                     /coded_by="XM_041476444.1:287..2500"
                     /db_xref="GeneID:121358332"
ORIGIN      
        1 mksscraglh replnstsst fhqvkrvsgm hlkpylklqk kerspeisqd slrghqgpaq
       61 gekytnctkl svfpkpslvt psqkllgiiy pntmcnmngk gpadgpsare kknalsatih
      121 qgeegegpld vwavvkpgnt kekiaffaaq qcssstrtgs mkikstwdid grtakrrkks
      181 vdlkkakiql ermreansrc sqpepfacgi ehcsvhfgsd ggdgafpgrs lsviemvafl
      241 eqrasallvd caktctaapa trpgaqpkal pgpepfssaa aceapaergp gepqgepvrv
      301 ldmvarlese clrrqserea gslsrnnsfr rnvgrvllas gtqpegevgk gvpaqgdglg
      361 eagvaeagyg grcgplgdte lwdggasaqq pfpsgldsrv gnvssglaha vlamtagrnd
      421 aetrmeppra llslcppaar lppdplqskn atvdctskep vifpkhpark eplcisisvt
      481 kteegcrkek lsssgedslp grlfflqreq paahelqprr egpqekpgev aqnededala
      541 sgrscvrssv ptepsapsvp ptegalqvld psclkrqvsh dfletrfkiq qllepqqyma
      601 flphhiivki fgllptrslv alkctcyyfk fiieyynirp adsrwvrdpr yredpckqck
      661 kkyvkgdvsl crwhpkpycq alpygpgywm cchrsqkgip gcklglhdnh wvpachsfnr
      721 aihkktrgag aeveeey
//
LOCUS       XP_041332388             737 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 34 [Pyrgilauda ruficollis].
ACCESSION   XP_041332388
VERSION     XP_041332388.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476454.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="F-box only protein 34"
                     /calculated_mol_wt=80355
     Region          599..646
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(602,606,609..610,613..614,618,620..621,625..627,629)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..737
                     /gene="FBXO34"
                     /coded_by="XM_041476454.1:235..2448"
                     /db_xref="GeneID:121358332"
ORIGIN      
        1 mksscraglh replnstsst fhqvkrvsgm hlkpylklqk kerspeisqd slrghqgpaq
       61 gekytnctkl svfpkpslvt psqkllgiiy pntmcnmngk gpadgpsare kknalsatih
      121 qgeegegpld vwavvkpgnt kekiaffaaq qcssstrtgs mkikstwdid grtakrrkks
      181 vdlkkakiql ermreansrc sqpepfacgi ehcsvhfgsd ggdgafpgrs lsviemvafl
      241 eqrasallvd caktctaapa trpgaqpkal pgpepfssaa aceapaergp gepqgepvrv
      301 ldmvarlese clrrqserea gslsrnnsfr rnvgrvllas gtqpegevgk gvpaqgdglg
      361 eagvaeagyg grcgplgdte lwdggasaqq pfpsgldsrv gnvssglaha vlamtagrnd
      421 aetrmeppra llslcppaar lppdplqskn atvdctskep vifpkhpark eplcisisvt
      481 kteegcrkek lsssgedslp grlfflqreq paahelqprr egpqekpgev aqnededala
      541 sgrscvrssv ptepsapsvp ptegalqvld psclkrqvsh dfletrfkiq qllepqqyma
      601 flphhiivki fgllptrslv alkctcyyfk fiieyynirp adsrwvrdpr yredpckqck
      661 kkyvkgdvsl crwhpkpycq alpygpgywm cchrsqkgip gcklglhdnh wvpachsfnr
      721 aihkktrgag aeveeey
//
LOCUS       XP_041332392             737 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 34 [Pyrgilauda ruficollis].
ACCESSION   XP_041332392
VERSION     XP_041332392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="F-box only protein 34"
                     /calculated_mol_wt=80355
     Region          599..646
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(602,606,609..610,613..614,618,620..621,625..627,629)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..737
                     /gene="FBXO34"
                     /coded_by="XM_041476458.1:1441..3654"
                     /db_xref="GeneID:121358332"
ORIGIN      
        1 mksscraglh replnstsst fhqvkrvsgm hlkpylklqk kerspeisqd slrghqgpaq
       61 gekytnctkl svfpkpslvt psqkllgiiy pntmcnmngk gpadgpsare kknalsatih
      121 qgeegegpld vwavvkpgnt kekiaffaaq qcssstrtgs mkikstwdid grtakrrkks
      181 vdlkkakiql ermreansrc sqpepfacgi ehcsvhfgsd ggdgafpgrs lsviemvafl
      241 eqrasallvd caktctaapa trpgaqpkal pgpepfssaa aceapaergp gepqgepvrv
      301 ldmvarlese clrrqserea gslsrnnsfr rnvgrvllas gtqpegevgk gvpaqgdglg
      361 eagvaeagyg grcgplgdte lwdggasaqq pfpsgldsrv gnvssglaha vlamtagrnd
      421 aetrmeppra llslcppaar lppdplqskn atvdctskep vifpkhpark eplcisisvt
      481 kteegcrkek lsssgedslp grlfflqreq paahelqprr egpqekpgev aqnededala
      541 sgrscvrssv ptepsapsvp ptegalqvld psclkrqvsh dfletrfkiq qllepqqyma
      601 flphhiivki fgllptrslv alkctcyyfk fiieyynirp adsrwvrdpr yredpckqck
      661 kkyvkgdvsl crwhpkpycq alpygpgywm cchrsqkgip gcklglhdnh wvpachsfnr
      721 aihkktrgag aeveeey
//
LOCUS       XP_041332396             737 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 34 [Pyrgilauda ruficollis].
ACCESSION   XP_041332396
VERSION     XP_041332396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476462.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="F-box only protein 34"
                     /calculated_mol_wt=80355
     Region          599..646
                     /region_name="F-box_FBXO34"
                     /note="F-box domain found in F-box only protein 34
                     (FBXO34) and similar proteins; cd22176"
                     /db_xref="CDD:438947"
     Site            order(602,606,609..610,613..614,618,620..621,625..627,629)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438947"
     CDS             1..737
                     /gene="FBXO34"
                     /coded_by="XM_041476462.1:151..2364"
                     /db_xref="GeneID:121358332"
ORIGIN      
        1 mksscraglh replnstsst fhqvkrvsgm hlkpylklqk kerspeisqd slrghqgpaq
       61 gekytnctkl svfpkpslvt psqkllgiiy pntmcnmngk gpadgpsare kknalsatih
      121 qgeegegpld vwavvkpgnt kekiaffaaq qcssstrtgs mkikstwdid grtakrrkks
      181 vdlkkakiql ermreansrc sqpepfacgi ehcsvhfgsd ggdgafpgrs lsviemvafl
      241 eqrasallvd caktctaapa trpgaqpkal pgpepfssaa aceapaergp gepqgepvrv
      301 ldmvarlese clrrqserea gslsrnnsfr rnvgrvllas gtqpegevgk gvpaqgdglg
      361 eagvaeagyg grcgplgdte lwdggasaqq pfpsgldsrv gnvssglaha vlamtagrnd
      421 aetrmeppra llslcppaar lppdplqskn atvdctskep vifpkhpark eplcisisvt
      481 kteegcrkek lsssgedslp grlfflqreq paahelqprr egpqekpgev aqnededala
      541 sgrscvrssv ptepsapsvp ptegalqvld psclkrqvsh dfletrfkiq qllepqqyma
      601 flphhiivki fgllptrslv alkctcyyfk fiieyynirp adsrwvrdpr yredpckqck
      661 kkyvkgdvsl crwhpkpycq alpygpgywm cchrsqkgip gcklglhdnh wvpachsfnr
      721 aihkktrgag aeveeey
//
LOCUS       XP_041332409             739 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Smaug homolog 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332409
VERSION     XP_041332409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..739
                     /product="protein Smaug homolog 1 isoform X1"
                     /calculated_mol_wt=81296
     Region          327..389
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(343,345..346,374,377..379,386,388)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..739
                     /gene="SAMD4A"
                     /coded_by="XM_041476475.1:528..2747"
                     /db_xref="GeneID:121358365"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsrtqarf lqlclehsla dctelhileg
       61 eannpgiinq wqqeskdkvi slllthlpll kpgnieakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrassssss sssgfggqgr grsdsvdygq
      181 ahyyhqrqns ddklngwqns rdsgisvsas swqdkslace nghlplysss svpttintig
      241 tststilsgq thhsplkrsv sltppmnvpn qplghgwmsh edlrargpqc ipsdhaplsp
      301 qssvassgsg gsehledqps arntfqeegs gmkdvpawlk slrlhkyaal fsqmtyeemm
      361 altecqleaq nvtkgarhki visiqklker qnllkslegd ileggnlrvp lqelhqmilt
      421 pikayssqns steehsrdve shqpssllgs dsqgsdckda aaagmqqhhl pgcegesgga
      481 plpegdlpgq ftrvmgkvct qllvsrpdee nissylqlid kcliheafte iqkkrllswk
      541 qqvqklfrsf prksllelsg yrqqrsrgfg qsnslptags agaglarrnp rqfqipsrnl
      601 ptarlgllgp tgllgtpqrs paaspailkq grqnlwfanp ggsnsmpsrs hssvqrtrsl
      661 pvhtspqtml mfqqpefqvp vtepdinnrl eslclsmteh alsgehslll glfqhvhats
      721 aeppstcpvp pkswdrlwl
//
LOCUS       XP_041332419             739 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Smaug homolog 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332419
VERSION     XP_041332419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..739
                     /product="protein Smaug homolog 1 isoform X1"
                     /calculated_mol_wt=81296
     Region          327..389
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(343,345..346,374,377..379,386,388)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..739
                     /gene="SAMD4A"
                     /coded_by="XM_041476485.1:452..2671"
                     /db_xref="GeneID:121358365"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsrtqarf lqlclehsla dctelhileg
       61 eannpgiinq wqqeskdkvi slllthlpll kpgnieakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrassssss sssgfggqgr grsdsvdygq
      181 ahyyhqrqns ddklngwqns rdsgisvsas swqdkslace nghlplysss svpttintig
      241 tststilsgq thhsplkrsv sltppmnvpn qplghgwmsh edlrargpqc ipsdhaplsp
      301 qssvassgsg gsehledqps arntfqeegs gmkdvpawlk slrlhkyaal fsqmtyeemm
      361 altecqleaq nvtkgarhki visiqklker qnllkslegd ileggnlrvp lqelhqmilt
      421 pikayssqns steehsrdve shqpssllgs dsqgsdckda aaagmqqhhl pgcegesgga
      481 plpegdlpgq ftrvmgkvct qllvsrpdee nissylqlid kcliheafte iqkkrllswk
      541 qqvqklfrsf prksllelsg yrqqrsrgfg qsnslptags agaglarrnp rqfqipsrnl
      601 ptarlgllgp tgllgtpqrs paaspailkq grqnlwfanp ggsnsmpsrs hssvqrtrsl
      661 pvhtspqtml mfqqpefqvp vtepdinnrl eslclsmteh alsgehslll glfqhvhats
      721 aeppstcpvp pkswdrlwl
//
LOCUS       XP_041332428             712 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Smaug homolog 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332428
VERSION     XP_041332428.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476494.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..712
                     /product="protein Smaug homolog 1 isoform X2"
                     /calculated_mol_wt=78251
     Region          327..389
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(343,345..346,374,377..379,386,388)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..712
                     /gene="SAMD4A"
                     /coded_by="XM_041476494.1:528..2666"
                     /db_xref="GeneID:121358365"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsrtqarf lqlclehsla dctelhileg
       61 eannpgiinq wqqeskdkvi slllthlpll kpgnieakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrassssss sssgfggqgr grsdsvdygq
      181 ahyyhqrqns ddklngwqns rdsgisvsas swqdkslace nghlplysss svpttintig
      241 tststilsgq thhsplkrsv sltppmnvpn qplghgwmsh edlrargpqc ipsdhaplsp
      301 qssvassgsg gsehledqps arntfqeegs gmkdvpawlk slrlhkyaal fsqmtyeemm
      361 altecqleaq nvtkgarhki visiqklker qnllkslegd ileggnlrvp lqelhqmilt
      421 pikayssqns steehsrdve shqpssllgs dsqgsdckda aaagmqqhhl pgcegesgga
      481 plpegdlpgq ftrvmgkvct qllvsrpdee nissylqlid kcliheafte iqkkrllswk
      541 qqvqklfrsf prksllelsg yrqqrsrgfg qsnslptags agaglarrnp rqfqipsrnl
      601 ptarlgllgp tgllgtpqrs paaspailkq grqnlwfanp ggsnsmpsrs hssvqrtrsl
      661 pvhtspqtml mfqqpefqvp vtepdinnrl eslclsmteh alsdgvdrts ti
//
LOCUS       XP_041332437             651 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Smaug homolog 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041332437
VERSION     XP_041332437.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476503.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..651
                     /product="protein Smaug homolog 1 isoform X3"
                     /calculated_mol_wt=71965
     Region          245..301
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(255,257..258,286,289..291,298,300)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..651
                     /gene="SAMD4A"
                     /coded_by="XM_041476503.1:528..2483"
                     /db_xref="GeneID:121358365"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsrtqarf lqlclehsla dctelhileg
       61 eannpgiinq wqqeskdkvi slllthlpll kpgnieakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrassssss sssgfggqgr grsdsvdygq
      181 ahyyhqrqns ddklngwqns rdsgisvsas swqdkslace nghlplysss svpttintig
      241 tststnvpaw lkslrlhkya alfsqmtyee mmaltecqle aqnvtkgarh kivisiqklk
      301 erqnllksle gdileggnlr vplqelhqmi ltpikayssq nssteehsrd veshqpssll
      361 gsdsqgsdck daaaagmqqh hlpgcegesg gaplpegdlp gqftrvmgkv ctqllvsrpd
      421 eenissylql idkcliheaf teiqkkrlls wkqqvqklfr sfprksllel sgyrqqrsrg
      481 fgqsnslpta gsagaglarr nprqfqipsr nlptarlgll gptgllgtpq rspaaspail
      541 kqgrqnlwfa npggsnsmps rshssvqrtr slpvhtspqt mlmfqqpefq vpvtepdinn
      601 rleslclsmt ehalsgehsl llglfqhvha tsaeppstcp vppkswdrlw l
//
LOCUS       XP_041332447             624 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Smaug homolog 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041332447
VERSION     XP_041332447.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476513.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="protein Smaug homolog 1 isoform X4"
                     /calculated_mol_wt=68920
     Region          245..301
                     /region_name="SAM_Smaug"
                     /note="SAM domain of Smaug subfamily; cd09557"
                     /db_xref="CDD:188956"
     Site            order(255,257..258,286,289..291,298,300)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:188956"
     CDS             1..624
                     /gene="SAMD4A"
                     /coded_by="XM_041476513.1:528..2402"
                     /db_xref="GeneID:121358365"
ORIGIN      
        1 mmfrdqvgvl agwfkgwnec eqtvallsll krvsrtqarf lqlclehsla dctelhileg
       61 eannpgiinq wqqeskdkvi slllthlpll kpgnieakve ymkllpkila hsiehnqhie
      121 esrqllsyal ihpatsledr salamwlnhl edrassssss sssgfggqgr grsdsvdygq
      181 ahyyhqrqns ddklngwqns rdsgisvsas swqdkslace nghlplysss svpttintig
      241 tststnvpaw lkslrlhkya alfsqmtyee mmaltecqle aqnvtkgarh kivisiqklk
      301 erqnllksle gdileggnlr vplqelhqmi ltpikayssq nssteehsrd veshqpssll
      361 gsdsqgsdck daaaagmqqh hlpgcegesg gaplpegdlp gqftrvmgkv ctqllvsrpd
      421 eenissylql idkcliheaf teiqkkrlls wkqqvqklfr sfprksllel sgyrqqrsrg
      481 fgqsnslpta gsagaglarr nprqfqipsr nlptarlgll gptgllgtpq rspaaspail
      541 kqgrqnlwfa npggsnsmps rshssvqrtr slpvhtspqt mlmfqqpefq vpvtepdinn
      601 rleslclsmt ehalsdgvdr tsti
//
LOCUS       XP_041332463            1277 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332463
VERSION     XP_041332463.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476529.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1277
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X1"
                     /calculated_mol_wt=143861
     Region          4..61
                     /region_name="Tudor_ARID4A_rpt1"
                     /note="first Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20459"
                     /db_xref="CDD:410530"
     Site            order(20,23,25,42,45,47)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410530"
     Region          62..121
                     /region_name="Tudor_ARID4A_rpt2"
                     /note="second Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20461"
                     /db_xref="CDD:410532"
     Site            order(70,74,76,93,95,97)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410532"
     Region          170..261
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          311..397
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(332..338,363,365..366,369,380,382..384,386)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          576..634
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(591..594,609,611..614,618,620..623,625..627,
                     630..631)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(591,611,614,618)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(608,610..615,617..621)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(608,611,615,617,621)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1277
                     /gene="ARID4A"
                     /coded_by="XM_041476529.1:154..3987"
                     /db_xref="GeneID:121358388"
ORIGIN      
        1 mkaadepayl tvgtdvsaky rgafceakik tvkrlvkvkv vlkgdnstql vqddqvkgpl
       61 rvgamvetkm pdgsfqeavi skltdaswyt vvfddgdert lrrtslclkg erhfaesetl
      121 dqlpltnpeh fgtpvigkks nrgrrsslpv tedekeeess eeededkrrl ndellgkvvs
      181 vtcnsekadw ypalvvspsc nddvtvkkdq clvrsfadsk fysiarkdik eldlqnlpks
      241 esspkkglqe astflstkgv prnwkmdise ilessssdee dgaaaetdee epkreektee
      301 vapeeeldpe erdnflqqly kfmedrgtpi nkppvlgykd lnlfklfrlv yqqggcdnie
      361 sgavwkqiym dlgipilnsa asynvktayr kylygfeeyc rsaniqfrti hhnepkvvee
      421 tqkhvepmee svkeeqkmpp tevkkeaeen ysssesekee ielrsprgrr rlardaapak
      481 kdgeedktqd klkdsnkenk dveetpenae kkenetplgk kitpkqkekk ikkqedsdke
      541 sdeeeerqre reeienkges egeedeedte pcltgtkvkv kygrgktqki yeasikstei
      601 ddgevlylvh yygwnvryde wvkadriiwp vekggpkrkq kkktknkedg ekdekkdeek
      661 qkskrgrppl kstlpsntsc slpktpssea tprrqtrrss gmfdsdrgsn dsgtsdsead
      721 esseknlnee fspetselek neklrdekld eenpkishvl kendrtqvqp letlklevee
      781 seqivqifgn ktdqmeeikr evekspkgkg rrsktkdpsl enakiapgsq eevtneslte
      841 perldvssld ckdissttes etepstkdkk llkrktldqa spekrnrres emevpnivse
      901 ertnecsgae ecrglnaees lrteneemps lvaesvphgp elrndsfqrp aeanesvplk
      961 deddtmpqig petllchevd lddldekeks stedtiaekp dpnasnsaps alapgvpssf
     1021 pvasplalsq desrsikses dmtievdsva eesqeglces esangfeast tssncsmagq
     1081 eretgekgqk rpsdsnsgtl akkqkrtpkr tsaaaknekn gtgqssdsed lpvldssskc
     1141 tpvkhinask pqkisrspar vvsphikdge kdkhrdkhhh qnasprvykw sfqlneldnm
     1201 ssterisflq eklqeirkyy mslksevati drrrkrlkkk drevshtgas mssassdtgm
     1261 spssssppqn vlavecr
//
LOCUS       XP_041332472            1276 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332472
VERSION     XP_041332472.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476538.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1276
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X2"
                     /calculated_mol_wt=143732
     Region          3..60
                     /region_name="Tudor_ARID4A_rpt1"
                     /note="first Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20459"
                     /db_xref="CDD:410530"
     Site            order(19,22,24,41,44,46)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410530"
     Region          61..120
                     /region_name="Tudor_ARID4A_rpt2"
                     /note="second Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20461"
                     /db_xref="CDD:410532"
     Site            order(69,73,75,92,94,96)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410532"
     Region          169..260
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          310..396
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(331..337,362,364..365,368,379,381..383,385)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          575..633
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(590..593,608,610..613,617,619..622,624..626,
                     629..630)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(590,610,613,617)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(607,609..614,616..620)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(607,610,614,616,620)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1276
                     /gene="ARID4A"
                     /coded_by="XM_041476538.1:432..4262"
                     /db_xref="GeneID:121358388"
ORIGIN      
        1 maadepaylt vgtdvsakyr gafceakikt vkrlvkvkvv lkgdnstqlv qddqvkgplr
       61 vgamvetkmp dgsfqeavis kltdaswytv vfddgdertl rrtslclkge rhfaesetld
      121 qlpltnpehf gtpvigkksn rgrrsslpvt edekeeesse eededkrrln dellgkvvsv
      181 tcnsekadwy palvvspscn ddvtvkkdqc lvrsfadskf ysiarkdike ldlqnlpkse
      241 sspkkglqea stflstkgvp rnwkmdisei lessssdeed gaaaetdeee pkreekteev
      301 apeeeldpee rdnflqqlyk fmedrgtpin kppvlgykdl nlfklfrlvy qqggcdnies
      361 gavwkqiymd lgipilnsaa synvktayrk ylygfeeycr saniqfrtih hnepkvveet
      421 qkhvepmees vkeeqkmppt evkkeaeeny sssesekeei elrsprgrrr lardaapakk
      481 dgeedktqdk lkdsnkenkd veetpenaek kenetplgkk itpkqkekki kkqedsdkes
      541 deeeerqrer eeienkgese geedeedtep cltgtkvkvk ygrgktqkiy easiksteid
      601 dgevlylvhy ygwnvrydew vkadriiwpv ekggpkrkqk kktknkedge kdekkdeekq
      661 kskrgrpplk stlpsntscs lpktpsseat prrqtrrssg mfdsdrgsnd sgtsdseade
      721 sseknlneef spetselekn eklrdeklde enpkishvlk endrtqvqpl etlklevees
      781 eqivqifgnk tdqmeeikre vekspkgkgr rsktkdpsle nakiapgsqe evtnesltep
      841 erldvssldc kdissttese tepstkdkkl lkrktldqas pekrnrrese mevpnivsee
      901 rtnecsgaee crglnaeesl rteneempsl vaesvphgpe lrndsfqrpa eanesvplkd
      961 eddtmpqigp etllchevdl ddldekekss tedtiaekpd pnasnsapsa lapgvpssfp
     1021 vasplalsqd esrsiksesd mtievdsvae esqeglcese sangfeastt ssncsmagqe
     1081 retgekgqkr psdsnsgtla kkqkrtpkrt saaaknekng tgqssdsedl pvldssskct
     1141 pvkhinaskp qkisrsparv vsphikdgek dkhrdkhhhq nasprvykws fqlneldnms
     1201 sterisflqe klqeirkyym slksevatid rrrkrlkkkd revshtgasm ssassdtgms
     1261 pssssppqnv lavecr
//
LOCUS       XP_041332481            1276 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332481
VERSION     XP_041332481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1276
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X2"
                     /calculated_mol_wt=143732
     Region          3..60
                     /region_name="Tudor_ARID4A_rpt1"
                     /note="first Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20459"
                     /db_xref="CDD:410530"
     Site            order(19,22,24,41,44,46)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410530"
     Region          61..120
                     /region_name="Tudor_ARID4A_rpt2"
                     /note="second Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20461"
                     /db_xref="CDD:410532"
     Site            order(69,73,75,92,94,96)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410532"
     Region          169..260
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          310..396
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(331..337,362,364..365,368,379,381..383,385)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          575..633
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(590..593,608,610..613,617,619..622,624..626,
                     629..630)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(590,610,613,617)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(607,609..614,616..620)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(607,610,614,616,620)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1276
                     /gene="ARID4A"
                     /coded_by="XM_041476547.1:339..4169"
                     /db_xref="GeneID:121358388"
ORIGIN      
        1 maadepaylt vgtdvsakyr gafceakikt vkrlvkvkvv lkgdnstqlv qddqvkgplr
       61 vgamvetkmp dgsfqeavis kltdaswytv vfddgdertl rrtslclkge rhfaesetld
      121 qlpltnpehf gtpvigkksn rgrrsslpvt edekeeesse eededkrrln dellgkvvsv
      181 tcnsekadwy palvvspscn ddvtvkkdqc lvrsfadskf ysiarkdike ldlqnlpkse
      241 sspkkglqea stflstkgvp rnwkmdisei lessssdeed gaaaetdeee pkreekteev
      301 apeeeldpee rdnflqqlyk fmedrgtpin kppvlgykdl nlfklfrlvy qqggcdnies
      361 gavwkqiymd lgipilnsaa synvktayrk ylygfeeycr saniqfrtih hnepkvveet
      421 qkhvepmees vkeeqkmppt evkkeaeeny sssesekeei elrsprgrrr lardaapakk
      481 dgeedktqdk lkdsnkenkd veetpenaek kenetplgkk itpkqkekki kkqedsdkes
      541 deeeerqrer eeienkgese geedeedtep cltgtkvkvk ygrgktqkiy easiksteid
      601 dgevlylvhy ygwnvrydew vkadriiwpv ekggpkrkqk kktknkedge kdekkdeekq
      661 kskrgrpplk stlpsntscs lpktpsseat prrqtrrssg mfdsdrgsnd sgtsdseade
      721 sseknlneef spetselekn eklrdeklde enpkishvlk endrtqvqpl etlklevees
      781 eqivqifgnk tdqmeeikre vekspkgkgr rsktkdpsle nakiapgsqe evtnesltep
      841 erldvssldc kdissttese tepstkdkkl lkrktldqas pekrnrrese mevpnivsee
      901 rtnecsgaee crglnaeesl rteneempsl vaesvphgpe lrndsfqrpa eanesvplkd
      961 eddtmpqigp etllchevdl ddldekekss tedtiaekpd pnasnsapsa lapgvpssfp
     1021 vasplalsqd esrsiksesd mtievdsvae esqeglcese sangfeastt ssncsmagqe
     1081 retgekgqkr psdsnsgtla kkqkrtpkrt saaaknekng tgqssdsedl pvldssskct
     1141 pvkhinaskp qkisrsparv vsphikdgek dkhrdkhhhq nasprvykws fqlneldnms
     1201 sterisflqe klqeirkyym slksevatid rrrkrlkkkd revshtgasm ssassdtgms
     1261 pssssppqnv lavecr
//
LOCUS       XP_041332489            1256 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332489
VERSION     XP_041332489.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476555.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1256
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X3"
                     /calculated_mol_wt=141496
     Region          4..61
                     /region_name="Tudor_ARID4A_rpt1"
                     /note="first Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20459"
                     /db_xref="CDD:410530"
     Site            order(20,23,25,42,45,47)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410530"
     Region          62..121
                     /region_name="Tudor_ARID4A_rpt2"
                     /note="second Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20461"
                     /db_xref="CDD:410532"
     Site            order(70,74,76,93,95,97)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410532"
     Region          170..261
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          311..397
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(332..338,363,365..366,369,380,382..384,386)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          576..634
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(591..594,609,611..614,618,620..623,625..627,
                     630..631)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(591,611,614,618)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(608,610..615,617..621)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(608,611,615,617,621)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1256
                     /gene="ARID4A"
                     /coded_by="XM_041476555.1:154..3924"
                     /db_xref="GeneID:121358388"
ORIGIN      
        1 mkaadepayl tvgtdvsaky rgafceakik tvkrlvkvkv vlkgdnstql vqddqvkgpl
       61 rvgamvetkm pdgsfqeavi skltdaswyt vvfddgdert lrrtslclkg erhfaesetl
      121 dqlpltnpeh fgtpvigkks nrgrrsslpv tedekeeess eeededkrrl ndellgkvvs
      181 vtcnsekadw ypalvvspsc nddvtvkkdq clvrsfadsk fysiarkdik eldlqnlpks
      241 esspkkglqe astflstkgv prnwkmdise ilessssdee dgaaaetdee epkreektee
      301 vapeeeldpe erdnflqqly kfmedrgtpi nkppvlgykd lnlfklfrlv yqqggcdnie
      361 sgavwkqiym dlgipilnsa asynvktayr kylygfeeyc rsaniqfrti hhnepkvvee
      421 tqkhvepmee svkeeqkmpp tevkkeaeen ysssesekee ielrsprgrr rlardaapak
      481 kdgeedktqd klkdsnkenk dveetpenae kkenetplgk kitpkqkekk ikkqedsdke
      541 sdeeeerqre reeienkges egeedeedte pcltgtkvkv kygrgktqki yeasikstei
      601 ddgevlylvh yygwnvryde wvkadriiwp vekggpkrkq kkktknkedg ekdekkdeek
      661 qkskrgrppl kstlpsntsc slpktpssed sgtsdseade sseknlneef spetselekn
      721 eklrdeklde enpkishvlk endrtqvqpl etlklevees eqivqifgnk tdqmeeikre
      781 vekspkgkgr rsktkdpsle nakiapgsqe evtnesltep erldvssldc kdissttese
      841 tepstkdkkl lkrktldqas pekrnrrese mevpnivsee rtnecsgaee crglnaeesl
      901 rteneempsl vaesvphgpe lrndsfqrpa eanesvplkd eddtmpqigp etllchevdl
      961 ddldekekss tedtiaekpd pnasnsapsa lapgvpssfp vasplalsqd esrsiksesd
     1021 mtievdsvae esqeglcese sangfeastt ssncsmagqe retgekgqkr psdsnsgtla
     1081 kkqkrtpkrt saaaknekng tgqssdsedl pvldssskct pvkhinaskp qkisrsparv
     1141 vsphikdgek dkhrdkhhhq nasprvykws fqlneldnms sterisflqe klqeirkyym
     1201 slksevatid rrrkrlkkkd revshtgasm ssassdtgms pssssppqnv lavecr
//
LOCUS       XP_041332497            1255 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332497
VERSION     XP_041332497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1255
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X4"
                     /calculated_mol_wt=141469
     Region          4..>40
                     /region_name="Tudor_SF"
                     /note="Tudor domain superfamily; cl02573"
                     /db_xref="CDD:470623"
     Region          40..99
                     /region_name="Tudor_ARID4A_rpt2"
                     /note="second Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20461"
                     /db_xref="CDD:410532"
     Site            order(48,52,54,71,73,75)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410532"
     Region          148..239
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          289..375
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(310..316,341,343..344,347,358,360..362,364)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          554..612
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(569..572,587,589..592,596,598..601,603..605,
                     608..609)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(569,589,592,596)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(586,588..593,595..599)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(586,589,593,595,599)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1255
                     /gene="ARID4A"
                     /coded_by="XM_041476563.1:154..3921"
                     /db_xref="GeneID:121358388"
ORIGIN      
        1 mkaadepayl tvgtdvsaky rgafceakik tvkrlvkvkv gamvetkmpd gsfqeavisk
       61 ltdaswytvv fddgdertlr rtslclkger hfaesetldq lpltnpehfg tpvigkksnr
      121 grrsslpvte dekeeessee ededkrrlnd ellgkvvsvt cnsekadwyp alvvspscnd
      181 dvtvkkdqcl vrsfadskfy siarkdikel dlqnlpkses spkkglqeas tflstkgvpr
      241 nwkmdiseil essssdeedg aaaetdeeep kreekteeva peeeldpeer dnflqqlykf
      301 medrgtpink ppvlgykdln lfklfrlvyq qggcdniesg avwkqiymdl gipilnsaas
      361 ynvktayrky lygfeeycrs aniqfrtihh nepkvveetq khvepmeesv keeqkmppte
      421 vkkeaeenys ssesekeeie lrsprgrrrl ardaapakkd geedktqdkl kdsnkenkdv
      481 eetpenaekk enetplgkki tpkqkekkik kqedsdkesd eeeerqrere eienkgeseg
      541 eedeedtepc ltgtkvkvky grgktqkiye asiksteidd gevlylvhyy gwnvrydewv
      601 kadriiwpve kggpkrkqkk ktknkedgek dekkdeekqk skrgrpplks tlpsntscsl
      661 pktpsseatp rrqtrrssgm fdsdrgsnds gtsdseades seknlneefs petselekne
      721 klrdekldee npkishvlke ndrtqvqple tlkleveese qivqifgnkt dqmeeikrev
      781 ekspkgkgrr sktkdpslen akiapgsqee vtnesltepe rldvssldck disstteset
      841 epstkdkkll krktldqasp ekrnrresem evpnivseer tnecsgaeec rglnaeeslr
      901 teneempslv aesvphgpel rndsfqrpae anesvplkde ddtmpqigpe tllchevdld
      961 dldekeksst edtiaekpdp nasnsapsal apgvpssfpv asplalsqde srsiksesdm
     1021 tievdsvaee sqeglceses angfeastts sncsmagqer etgekgqkrp sdsnsgtlak
     1081 kqkrtpkrts aaaknekngt gqssdsedlp vldssskctp vkhinaskpq kisrsparvv
     1141 sphikdgekd khrdkhhhqn asprvykwsf qlneldnmss terisflqek lqeirkyyms
     1201 lksevatidr rrkrlkkkdr evshtgasms sassdtgmsp ssssppqnvl avecr
//
LOCUS       XP_041332507            1213 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 4A isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332507
VERSION     XP_041332507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1213
                     /product="AT-rich interactive domain-containing protein 4A
                     isoform X5"
                     /calculated_mol_wt=136972
     Region          1..57
                     /region_name="Tudor_ARID4A_rpt2"
                     /note="second Tudor domain found in AT-rich interactive
                     domain-containing protein 4A (ARID4A) and similar
                     proteins; cd20461"
                     /db_xref="CDD:410532"
     Site            order(6,10,12,29,31,33)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410532"
     Region          106..197
                     /region_name="RBB1NT"
                     /note="RBB1NT (NUC162) domain; pfam08169"
                     /db_xref="CDD:462390"
     Region          247..333
                     /region_name="ARID_ARID4A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 4A (ARID4A) and
                     similar proteins; cd16882"
                     /db_xref="CDD:350646"
     Site            order(268..274,299,301..302,305,316,318..320,322)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350646"
     Region          512..570
                     /region_name="CBD_RBP1_like"
                     /note="chromo barrel domain of retinoblastoma binding
                     protein 1, and similar proteins; cd18641"
                     /db_xref="CDD:350843"
     Site            order(527..530,545,547..550,554,556..559,561..563,
                     566..567)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350843"
     Site            order(527,547,550,554)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350843"
     Site            order(544,546..551,553..557)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     Site            order(544,547,551,553,557)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350843"
     CDS             1..1213
                     /gene="ARID4A"
                     /coded_by="XM_041476573.1:504..4145"
                     /db_xref="GeneID:121358388"
ORIGIN      
        1 mvetkmpdgs fqeavisklt daswytvvfd dgdertlrrt slclkgerhf aesetldqlp
       61 ltnpehfgtp vigkksnrgr rsslpvtede keeesseeed edkrrlndel lgkvvsvtcn
      121 sekadwypal vvspscnddv tvkkdqclvr sfadskfysi arkdikeldl qnlpksessp
      181 kkglqeastf lstkgvprnw kmdiseiles sssdeedgaa aetdeeepkr eekteevape
      241 eeldpeerdn flqqlykfme drgtpinkpp vlgykdlnlf klfrlvyqqg gcdniesgav
      301 wkqiymdlgi pilnsaasyn vktayrkyly gfeeycrsan iqfrtihhne pkvveetqkh
      361 vepmeesvke eqkmpptevk keaeenysss esekeeielr sprgrrrlar daapakkdge
      421 edktqdklkd snkenkdvee tpenaekken etplgkkitp kqkekkikkq edsdkesdee
      481 eerqrereei enkgesegee deedtepclt gtkvkvkygr gktqkiyeas iksteiddge
      541 vlylvhyygw nvrydewvka driiwpvekg gpkrkqkkkt knkedgekde kkdeekqksk
      601 rgrpplkstl psntscslpk tpsseatprr qtrrssgmfd sdrgsndsgt sdseadesse
      661 knlneefspe tseleknekl rdekldeenp kishvlkend rtqvqpletl kleveeseqi
      721 vqifgnktdq meeikrevek spkgkgrrsk tkdpslenak iapgsqeevt neslteperl
      781 dvssldckdi ssttesetep stkdkkllkr ktldqaspek rnrresemev pnivseertn
      841 ecsgaeecrg lnaeeslrte neempslvae svphgpelrn dsfqrpaean esvplkdedd
      901 tmpqigpetl lchevdlddl dekekssted tiaekpdpna snsapsalap gvpssfpvas
      961 plalsqdesr siksesdmti evdsvaeesq eglcesesan gfeasttssn csmagqeret
     1021 gekgqkrpsd snsgtlakkq krtpkrtsaa aknekngtgq ssdsedlpvl dssskctpvk
     1081 hinaskpqki srsparvvsp hikdgekdkh rdkhhhqnas prvykwsfql neldnmsste
     1141 risflqeklq eirkyymslk sevatidrrr krlkkkdrev shtgasmssa ssdtgmspss
     1201 ssppqnvlav ecr
//
LOCUS       XP_041332519             412 aa            linear   VRT 06-MAY-2021
DEFINITION  N-alpha-acetyltransferase 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041332519
VERSION     XP_041332519.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476585.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..412
                     /product="N-alpha-acetyltransferase 30"
                     /calculated_mol_wt=43910
     Region          274..388
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(337..339,349..350)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..412
                     /gene="NAA30"
                     /coded_by="XM_041476585.1:132..1370"
                     /db_xref="GeneID:121358412"
ORIGIN      
        1 maevppgpss vlspqgdtls pfpggggggg aassssssaa syaaaaaact gaqdeeaeee
       61 eeeegpaggr eqqqrggggg sdggkggpqh rhhhrhhhhp phhnhqlngl ispelrhlra
      121 slkgkilgse agaapeglen krasktmgsg qqqpsppsaa pcssphanhl ppqgrtapsp
      181 ppsppakgdr sqpaatttta aaktaarngl agetgleeee qeegdeggee eeeslqllsg
      241 slaaacslkg sgtdcqpeed ltiryvqyes elqmpdimrl itkdlsepys iytyryfihn
      301 wpqlcflamv geecvgaivc kldmhkkmfr rgyiamlavd skyrrkgigt nlvkkaiyam
      361 vegdcdevvl eteitnksal klyenlgfvr dkrlfryyln gvdalrlklw lr
//
LOCUS       XP_041332532            1558 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protein TALPID3 [Pyrgilauda ruficollis].
ACCESSION   XP_041332532
VERSION     XP_041332532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476598.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1558
                     /product="LOW QUALITY PROTEIN: protein TALPID3"
                     /calculated_mol_wt=168459
     Region          148..1402
                     /region_name="TALPID3"
                     /note="Hedgehog signalling target; pfam15324"
                     /db_xref="CDD:434634"
     CDS             1..1558
                     /gene="KIAA0586"
                     /coded_by="XM_041476598.1:140..4816"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:121358420"
ORIGIN      
        1 meaesgsggs rdslgsltag evlvrstaar reqppaggrg rkvpvpvavq klraggspcp
       61 adaaaaadga vraspaagpa rapggtgtar dppgaaagvl stkaypecll pvensepvfl
      121 sqmdhpkeaa aqddrlvlle nsrgpeddvf isqyatgqke alravlmqkx vxivelfcfc
      181 ttaalqffak naylvrkkcf fleakvnsvs ellqklqdtd rqvqrvseqq khmkaqheep
      241 hyqqrvsele kqmnafmvqr iqhleklqeq qmniqshlis savntrglqq apvpasgpla
      301 ghwekpeqrs ltneapsshr slfpasaapa qvfpeayssn fpshgghtqk splktpvprr
      361 yapepvpkng kisenpvvek entpkpereg egkglehvln sqetplkqie yskktalnnn
      421 erswhaerdr hnalpadlfp sfesynsiqk tvqkaddllq dlgklrremh nilqeasswk
      481 sdmtdiiktk nppvaphppg hhlvskpsil qnvqvprsil tdaermlrgv qnnkkvleen
      541 leavtqakdg damyafsnss tanrdvleei rirrtvddwi ktiseeiqae mtsdseqgkc
      601 dqkapwnkra qnlravktkk etkektqniq ggltkkpspp aqplqkqved ntkkqkfrtf
      661 lsenvqskeg kadegavggn alvqsedyls rvygkpiyhg hrstlkkgpy lrfnspspks
      721 klprpkliet vrgtkvksar tqtcshmqkv isspkkkknn pvcapaqqsq ylfspsqdvp
      781 aasgpleghl mpmaiplgqt qssntslqpa gviidkphpv tvttslpqvp pkspvevkkp
      841 niaviemrse kkeppqlsvq vlpsvdidsv ssasgtvspv ppsseplfsp vnaviqnpee
      901 ihseeedtkl pganfidvtd vtqdqeeekd eipeflepvl elngqfkvas pqhngplfpp
      961 vasapqqpad ildeliqkre tiedklvnwv eqeimakiis emcpaqtetv pstsssmkse
     1021 dsevgtpgiv evaggggfql fvnagvpvds eminhfvkea lsetiatmlg nsqaqravpd
     1081 pppppsttsv meapvptpvp tpqatppptp psekelpqvk tpdsspsppe msedvhghek
     1141 iketgveiaa vlgrvvtpvv tpvvtpvttp ppvatpsppv sewdsqaekr espklpnpwd
     1201 gaelpleeen pspvpeepfc pktvemsvan deepealvfp sqqlpgrlce plpcpaqvps
     1261 pvptvssgvs tqessltptg tettdrplse gevlfpygqp lpaaalaegg lsfpnlaesl
     1321 sstlrdanem dydppsegqv vrrmgkgchr dpvlalltkl nqapvfvqer iehledsdgs
     1381 igelsegqrp rlsrvqeril mgnsifmehp aaqsfgnrpr qglrsaspgq laqigeifgd
     1441 adtspspmll aelesqpgsn palpaaqpgc rmtplpedls qeesqgaahv qavrprvifv
     1501 rrksedmqge gedgaphlnp hlsaagvsvq lpatstdnet qslssarges dssgtdtf
//
LOCUS       XP_041332545              89 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import inner membrane translocase subunit Tim9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332545
VERSION     XP_041332545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..89
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim9"
                     /calculated_mol_wt=10227
     Region          10..69
                     /region_name="zf-Tim10_DDP"
                     /note="Tim10/DDP family zinc finger; pfam02953"
                     /db_xref="CDD:460764"
     CDS             1..89
                     /gene="TIMM9"
                     /coded_by="XM_041476611.1:149..418"
                     /db_xref="GeneID:121358427"
ORIGIN      
        1 magqisesdq ikqfkeflgt ynkltencfv dcikdftsrd vkpeeitcse nclqkylkmt
       61 qrismrfqey hiqqnealaa kagllsqpr
//
LOCUS       XP_041332554              89 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import inner membrane translocase subunit Tim9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332554
VERSION     XP_041332554.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476620.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..89
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim9"
                     /calculated_mol_wt=10227
     Region          10..69
                     /region_name="zf-Tim10_DDP"
                     /note="Tim10/DDP family zinc finger; pfam02953"
                     /db_xref="CDD:460764"
     CDS             1..89
                     /gene="TIMM9"
                     /coded_by="XM_041476620.1:120..389"
                     /db_xref="GeneID:121358427"
ORIGIN      
        1 magqisesdq ikqfkeflgt ynkltencfv dcikdftsrd vkpeeitcse nclqkylkmt
       61 qrismrfqey hiqqnealaa kagllsqpr
//
LOCUS       XP_041332562              89 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import inner membrane translocase subunit Tim9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332562
VERSION     XP_041332562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..89
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim9"
                     /calculated_mol_wt=10227
     Region          10..69
                     /region_name="zf-Tim10_DDP"
                     /note="Tim10/DDP family zinc finger; pfam02953"
                     /db_xref="CDD:460764"
     CDS             1..89
                     /gene="TIMM9"
                     /coded_by="XM_041476628.1:47..316"
                     /db_xref="GeneID:121358427"
ORIGIN      
        1 magqisesdq ikqfkeflgt ynkltencfv dcikdftsrd vkpeeitcse nclqkylkmt
       61 qrismrfqey hiqqnealaa kagllsqpr
//
LOCUS       XP_041332575             327 aa            linear   VRT 06-MAY-2021
DEFINITION  MAPK-interacting and spindle-stabilizing protein-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332575
VERSION     XP_041332575.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476641.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="MAPK-interacting and spindle-stabilizing
                     protein-like isoform X1"
                     /calculated_mol_wt=32173
     Region          87..324
                     /region_name="MISS"
                     /note="MAPK-interacting and spindle-stabilising
                     protein-like; pfam15822"
                     /db_xref="CDD:318115"
     CDS             1..327
                     /gene="MAPK1IP1L"
                     /coded_by="XM_041476641.1:16..999"
                     /db_xref="GeneID:121358445"
ORIGIN      
        1 mgvacdataa rkggvatprv ggagdtaave grgrtcahlr cggggggvva cgrglrdavp
       61 vpvpvavave lrpprrsgpa pappaqlada lpdqspakts kvsstkpgqq pgqppqgwpa
      121 snpwnnpsap pmtptglppn tsassvpfgp pptgmypsmp pgppapfppp ptgpscpppg
      181 gpyppptvpg pvppgqyppp nmpfpelprp yggptepaap papvgpwgsm psgawgptmg
      241 gqypapsmpy pppgpysapt qtpgaaptvp wgtvppgtwg psppgpfppp tgsypapgly
      301 ptppnpfqvp sgpagapsmp ggphpyr
//
LOCUS       XP_041332583             249 aa            linear   VRT 06-MAY-2021
DEFINITION  MAPK-interacting and spindle-stabilizing protein-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332583
VERSION     XP_041332583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="MAPK-interacting and spindle-stabilizing
                     protein-like isoform X2"
                     /calculated_mol_wt=24812
     Region          7..246
                     /region_name="MISS"
                     /note="MAPK-interacting and spindle-stabilising
                     protein-like; pfam15822"
                     /db_xref="CDD:318115"
     CDS             1..249
                     /gene="MAPK1IP1L"
                     /coded_by="XM_041476649.1:100..849"
                     /db_xref="GeneID:121358445"
ORIGIN      
        1 msgtddfsla dalpdqspak tskvsstkpg qqpgqppqgw pasnpwnnps appmtptglp
       61 pntsassvpf gppptgmyps mppgppapfp ppptgpscpp pggpyppptv pgpvppgqyp
      121 ppnmpfpelp rpyggptepa appapvgpwg smpsgawgpt mggqypapsm pypppgpysa
      181 ptqtpgaapt vpwgtvppgt wgpsppgpfp pptgsypapg lyptppnpfq vpsgpagaps
      241 mpggphpyr
//
LOCUS       XP_041332596            1355 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332596
VERSION     XP_041332596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1355
                     /product="kinectin isoform X1"
                     /calculated_mol_wt=154975
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1302
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1355
                     /gene="KTN1"
                     /coded_by="XM_041476662.1:200..4267"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqaltqei
      841 ealkeevgns qlemekqvti tsqvkelqtl lkgkekqvkt mealleekek eivkkgeclq
      901 gqkdtiaqls skvqeleqqn lqqlqqvpaa sqvqdmenll kgeeeqmkkl kamveekere
      961 ianqvkqlqd vqkenesfka qiqelkqenc kqaslavqse ellqvvagke keiadlqsel
     1021 asqrnafeqq rkknndlrek nweamealas tekllqdkvn ktakekqqhl eaaevetrql
     1081 lqklfpkvsl psnmshsewi cgfekmakey lreasgsedv kameqklkea eemhillqle
     1141 cekyksvlae tegilqrlqr sveeeeskwk ikveesqkel kqmrsvvtsl qheverlkee
     1201 nkevetlkke rehleselek aeierstyvs evrelkdllt elqkklddsy seavrqneel
     1261 nllktqlnet lsklkvdqne rekvagdlpk aqeslaaler eigkvfgdan viensdvctd
     1321 selsdkrrnv vvnltqdvgh lkkllvsvsq mlskg
//
LOCUS       XP_041332605            1355 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332605
VERSION     XP_041332605.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476671.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1355
                     /product="kinectin isoform X1"
                     /calculated_mol_wt=154975
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1302
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1355
                     /gene="KTN1"
                     /coded_by="XM_041476671.1:172..4239"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqaltqei
      841 ealkeevgns qlemekqvti tsqvkelqtl lkgkekqvkt mealleekek eivkkgeclq
      901 gqkdtiaqls skvqeleqqn lqqlqqvpaa sqvqdmenll kgeeeqmkkl kamveekere
      961 ianqvkqlqd vqkenesfka qiqelkqenc kqaslavqse ellqvvagke keiadlqsel
     1021 asqrnafeqq rkknndlrek nweamealas tekllqdkvn ktakekqqhl eaaevetrql
     1081 lqklfpkvsl psnmshsewi cgfekmakey lreasgsedv kameqklkea eemhillqle
     1141 cekyksvlae tegilqrlqr sveeeeskwk ikveesqkel kqmrsvvtsl qheverlkee
     1201 nkevetlkke rehleselek aeierstyvs evrelkdllt elqkklddsy seavrqneel
     1261 nllktqlnet lsklkvdqne rekvagdlpk aqeslaaler eigkvfgdan viensdvctd
     1321 selsdkrrnv vvnltqdvgh lkkllvsvsq mlskg
//
LOCUS       XP_041332613            1355 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332613
VERSION     XP_041332613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1355
                     /product="kinectin isoform X1"
                     /calculated_mol_wt=154975
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1302
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1355
                     /gene="KTN1"
                     /coded_by="XM_041476679.1:330..4397"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqaltqei
      841 ealkeevgns qlemekqvti tsqvkelqtl lkgkekqvkt mealleekek eivkkgeclq
      901 gqkdtiaqls skvqeleqqn lqqlqqvpaa sqvqdmenll kgeeeqmkkl kamveekere
      961 ianqvkqlqd vqkenesfka qiqelkqenc kqaslavqse ellqvvagke keiadlqsel
     1021 asqrnafeqq rkknndlrek nweamealas tekllqdkvn ktakekqqhl eaaevetrql
     1081 lqklfpkvsl psnmshsewi cgfekmakey lreasgsedv kameqklkea eemhillqle
     1141 cekyksvlae tegilqrlqr sveeeeskwk ikveesqkel kqmrsvvtsl qheverlkee
     1201 nkevetlkke rehleselek aeierstyvs evrelkdllt elqkklddsy seavrqneel
     1261 nllktqlnet lsklkvdqne rekvagdlpk aqeslaaler eigkvfgdan viensdvctd
     1321 selsdkrrnv vvnltqdvgh lkkllvsvsq mlskg
//
LOCUS       XP_041332622            1355 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332622
VERSION     XP_041332622.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476688.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1355
                     /product="kinectin isoform X1"
                     /calculated_mol_wt=154975
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1302
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1355
                     /gene="KTN1"
                     /coded_by="XM_041476688.1:55..4122"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqaltqei
      841 ealkeevgns qlemekqvti tsqvkelqtl lkgkekqvkt mealleekek eivkkgeclq
      901 gqkdtiaqls skvqeleqqn lqqlqqvpaa sqvqdmenll kgeeeqmkkl kamveekere
      961 ianqvkqlqd vqkenesfka qiqelkqenc kqaslavqse ellqvvagke keiadlqsel
     1021 asqrnafeqq rkknndlrek nweamealas tekllqdkvn ktakekqqhl eaaevetrql
     1081 lqklfpkvsl psnmshsewi cgfekmakey lreasgsedv kameqklkea eemhillqle
     1141 cekyksvlae tegilqrlqr sveeeeskwk ikveesqkel kqmrsvvtsl qheverlkee
     1201 nkevetlkke rehleselek aeierstyvs evrelkdllt elqkklddsy seavrqneel
     1261 nllktqlnet lsklkvdqne rekvagdlpk aqeslaaler eigkvfgdan viensdvctd
     1321 selsdkrrnv vvnltqdvgh lkkllvsvsq mlskg
//
LOCUS       XP_041332631            1333 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332631
VERSION     XP_041332631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1333
                     /product="kinectin isoform X2"
                     /calculated_mol_wt=152524
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          297..>491
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          425..1280
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1333
                     /gene="KTN1"
                     /coded_by="XM_041476697.1:200..4201"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn gtlekrepve vvkhnvnegi
      241 qkssgkklkn etdkenaevk fkdfvtsmkn mifsedearc vvevlkeksg aihdflqkas
      301 kaetaaalhq lqdkekmlta mkeeaavake qckqlsqelv aekerngllt akmrerinal
      361 ekehgtfqsk ihvsyqesqq mkikfqqlre qmeaeishlk qengilrdav ststnqmesk
      421 qsaelnklrq dyarlmnelg eknsklqqee lqkknaeqav aqlkvqqqea errweeiqay
      481 lrkrtaehea aqqdvqnklv akdneiqslh skltdtmvsk qqleqrmlql leaeqkrate
      541 kdsmqmqmqe lieqndalna qlqkfhsqma aqssasvlae elqkvvaekd iqikqmedsl
      601 gnehanltsk eeelkvlqnm nlslksevqk lqaltneqaa aahelermqk sihikddkir
      661 tledqlreel aqisntkeef kvlkdqntal qaevqklqtl lseqtnkdli eqmeksmrer
      721 ddkiktveel leagliqvat keeelkalrt ensslrkelq slqiqqseqv sfqslveelq
      781 kvihekdgki ksveellqae ilkvaskekt vqaltqeiea lkeevgnsql emekqvtits
      841 qvkelqtllk gkekqvktme alleekekei vkkgeclqgq kdtiaqlssk vqeleqqnlq
      901 qlqqvpaasq vqdmenllkg eeeqmkklka mveekereia nqvkqlqdvq kenesfkaqi
      961 qelkqenckq aslavqseel lqvvagkeke iadlqselas qrnafeqqrk knndlreknw
     1021 eamealaste kllqdkvnkt akekqqhlea aevetrqllq klfpkvslps nmshsewicg
     1081 fekmakeylr easgsedvka meqklkeaee mhillqlece kyksvlaete gilqrlqrsv
     1141 eeeeskwkik veesqkelkq mrsvvtslqh everlkeenk evetlkkere hleselekae
     1201 ierstyvsev relkdlltel qkklddsyse avrqneelnl lktqlnetls klkvdqnere
     1261 kvagdlpkaq eslaalerei gkvfgdanvi ensdvctdse lsdkrrnvvv nltqdvghlk
     1321 kllvsvsqml skg
//
LOCUS       XP_041332639            1332 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041332639
VERSION     XP_041332639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1332
                     /product="kinectin isoform X3"
                     /calculated_mol_wt=152375
     Region          29..>109
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1279
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1332
                     /gene="KTN1"
                     /coded_by="XM_041476705.1:202..4200"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqvtitsq
      841 vkelqtllkg kekqvktmea lleekekeiv kkgeclqgqk dtiaqlsskv qeleqqnlqq
      901 lqqvpaasqv qdmenllkge eeqmkklkam veekereian qvkqlqdvqk enesfkaqiq
      961 elkqenckqa slavqseell qvvagkekei adlqselasq rnafeqqrkk nndlreknwe
     1021 amealastek llqdkvnkta kekqqhleaa evetrqllqk lfpkvslpsn mshsewicgf
     1081 ekmakeylre asgsedvkam eqklkeaeem hillqlecek yksvlaeteg ilqrlqrsve
     1141 eeeskwkikv eesqkelkqm rsvvtslqhe verlkeenke vetlkkereh leselekaei
     1201 erstyvsevr elkdlltelq kklddsysea vrqneelnll ktqlnetlsk lkvdqnerek
     1261 vagdlpkaqe slaalereig kvfgdanvie nsdvctdsel sdkrrnvvvn ltqdvghlkk
     1321 llvsvsqmls kg
//
LOCUS       XP_041332647            1332 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041332647
VERSION     XP_041332647.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476713.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1332
                     /product="kinectin isoform X4"
                     /calculated_mol_wt=152365
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          317..>565
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1279
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1332
                     /gene="KTN1"
                     /coded_by="XM_041476713.1:201..4199"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qssasvlaee lqkvvaekdi qikqmedslg
      601 nehanltske eelkvlqnmn lslksevqkl qaltneqaaa ahelermqks ihikddkirt
      661 ledqlreela qisntkeefk vlkdqntalq aevqklqtll seqtnkdlie qmeksmrerd
      721 dkiktveell eagliqvatk eeelkalrte nsslrkelqs lqiqqseqvs fqslveelqk
      781 vihekdgkik sveellqaei lkvaskektv qaltqeieal keevgnsqle mekqvtitsq
      841 vkelqtllkg kekqvktmea lleekekeiv kkgeclqgqk dtiaqlsskv qeleqqnlqq
      901 lqqvpaasqv qdmenllkge eeqmkklkam veekereian qvkqlqdvqk enesfkaqiq
      961 elkqenckqa slavqseell qvvagkekei adlqselasq rnafeqqrkk nndlreknwe
     1021 amealastek llqdkvnkta kekqqhleaa evetrqllqk lfpkvslpsn mshsewicgf
     1081 ekmakeylre asgsedvkam eqklkeaeem hillqlecek yksvlaeteg ilqrlqrsve
     1141 eeeskwkikv eesqkelkqm rsvvtslqhe verlkeenke vetlkkereh leselekaei
     1201 erstyvsevr elkdlltelq kklddsysea vrqneelnll ktqlnetlsk lkvdqnerek
     1261 vagdlpkaqe slaalereig kvfgdanvie nsdvctdsel sdkrrnvvvn ltqdvghlkk
     1321 llvsvsqmls kg
//
LOCUS       XP_041332653            1327 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041332653
VERSION     XP_041332653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1327
                     /product="kinectin isoform X5"
                     /calculated_mol_wt=151687
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1274
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1327
                     /gene="KTN1"
                     /coded_by="XM_041476719.1:197..4180"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqaltqei
      841 ealkeevgns qlemekqvti tsqvkelqtl lkgkekqvkt mealleekek eivkkgeclq
      901 gqkdtiaqls skvqeleqqn lqqlqqvpaa sqvqdmenll kgeeeqmkkl kamveekere
      961 ianqvkqlqd vqkenesfka qiqelkqenc kqaslavqse ellqvvagke keiadlqsel
     1021 asqrnafeqq rkknndlrek nweamealas tekllqdkvn ktakekqqhl eaaevetrql
     1081 lqklfpkvsl psnmshsewi cgfekmakey lreasgsedv kameqklkea eemhillqle
     1141 cekyksvlae tegilqrlqr sveeeeskwk ikveesqkel kqmrsvvtsl qheverlkee
     1201 nkevetlkke rehleselek aeierstyvs evrelktqln etlsklkvdq nerekvagdl
     1261 pkaqeslaal ereigkvfgd anviensdvc tdselsdkrr nvvvnltqdv ghlkkllvsv
     1321 sqmlskg
//
LOCUS       XP_041332662            1326 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041332662
VERSION     XP_041332662.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476728.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1326
                     /product="kinectin isoform X6"
                     /calculated_mol_wt=151632
     Region          29..>109
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1273
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1326
                     /gene="KTN1"
                     /coded_by="XM_041476728.1:199..4179"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqaltqei
      841 ealkeevgns qlemekqvti tsqvkelqtl lkgkekqvkt mealleekek eivkkgeclq
      901 gqkdtiaqls skvqeleqqn lqqlqqvpaa sqvqdmenll kgeeeqmkkl kamveekere
      961 ianqvkqlqd vqkenesfka qiqelkqenc kqaslavqse ellqvvagke keiadlqsel
     1021 asqrnafeqq rkknnekqqh leaaevetrq llqklfpkvs lpsnmshsew icgfekmake
     1081 ylreasgsed vkameqklke aeemhillql ecekyksvla etegilqrlq rsveeeeskw
     1141 kikveesqke lkqmrsvvts lqheverlke enkevetlkk erehlesele kaeierstyv
     1201 sevrelkdll telqkkldds yseavrqnee lnllktqlne tlsklkvdqn erekvagdlp
     1261 kaqeslaale reigkvfgda nviensdvct dselsdkrrn vvvnltqdvg hlkkllvsvs
     1321 qmlskg
//
LOCUS       XP_041332668            1298 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041332668
VERSION     XP_041332668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1298
                     /product="kinectin isoform X7"
                     /calculated_mol_wt=148344
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          447..1245
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1298
                     /gene="KTN1"
                     /coded_by="XM_041476734.1:195..4091"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqaltqei
      841 ealkeevgns qlemekqvti tsqvkelqtl lkgkekqvkt mealleekek eivkkgeclq
      901 gqkdtiaqls skvqeleqqn lqqlqqvpaa sqvqdmenll kgeeeqmkkl kamveekere
      961 ianqvkqlqd vqkenesfka qiqelkqenc kqaslavqse ellqvvagke keiadlqsel
     1021 asqrnafeqq rkknnekqqh leaaevetrq llqklfpkvs lpsnmshsew icgfekmake
     1081 ylreasgsed vkameqklke aeemhillql ecekyksvla etegilqrlq rsveeeeskw
     1141 kikveesqke lkqmrsvvts lqheverlke enkevetlkk erehlesele kaeierstyv
     1201 sevrelktql netlsklkvd qnerekvagd lpkaqeslaa lereigkvfg danviensdv
     1261 ctdselsdkr rnvvvnltqd vghlkkllvs vsqmlskg
//
LOCUS       XP_041332673            1304 aa            linear   VRT 06-MAY-2021
DEFINITION  kinectin isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041332673
VERSION     XP_041332673.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476739.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1304
                     /product="kinectin isoform X8"
                     /calculated_mol_wt=149087
     Region          29..>102
                     /region_name="Rib_recp_KP_reg"
                     /note="Ribosome receptor lysine/proline rich region;
                     pfam05104"
                     /db_xref="CDD:461548"
     Region          319..>513
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          445..1201
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1304
                     /gene="KTN1"
                     /coded_by="XM_041476739.1:198..4112"
                     /db_xref="GeneID:121358457"
ORIGIN      
        1 mefyestyfi ilipsvvitv iflffwlfmk etlydevlak qkrdlkfpps kadkkktekk
       61 knkkkeaqng nihesdsesa prdfklsdal steeepvpav psggteapag lrerkkkekk
      121 hkanqddhvt kdsegskssg kkvdpvpvtk qptppsepta akkkpgqkkq kngmddqdsk
      181 tdsvvspakk qepvllhqei kqenvsgkkk vsakkqkvdn vfvdepliqa ttyiplmdns
      241 dsgtlekrep vevvkhnvne giqkssgkkl knetdkenae vkfkdfvtsm knmifsedea
      301 rcvvevlkek sgaihdflqk askaetaaal hqlqdkekml tamkeeaava keqckqlsqe
      361 lvaekerngl ltakmrerin alekehgtfq skihvsyqes qqmkikfqql reqmeaeish
      421 lkqengilrd avststnqme skqsaelnkl rqdyarlmne lgeknsklqq eelqkknaeq
      481 avaqlkvqqq eaerrweeiq aylrkrtaeh eaaqqdvqnk lvakdneiqs lhskltdtmv
      541 skqqleqrml qlleaeqkra tekdsmqmqm qelieqndal naqlqkfhsq maaqssasvl
      601 aeelqkvvae kdiqikqmed slgnehanlt skeeelkvlq nmnlslksev qklqaltneq
      661 aaaahelerm qksihikddk irtledqlre elaqisntke efkvlkdqnt alqaevqklq
      721 tllseqtnkd lieqmeksmr erddkiktve elleagliqv atkeeelkal rtensslrke
      781 lqslqiqqse qvsfqslvee lqkvihekdg kiksveellq aeilkvaske ktvqvtitsq
      841 vkelqtllkg kekqvktmea lleekekeiv kkgeclqgqk dtiaqlsskv qeleqqnlqq
      901 lqqvpaasqv qdmenllkge eeqmkklkam veekereian qvkqlqdvqk enesfkaqiq
      961 elkqenckqa slavqseell qvvagkekei adlqselasq rnafeqqrkk nndlreknwe
     1021 amealastek llqdkvnkta kekqqhleaa evetrqllqk lfpkvslpsn mshsewicgf
     1081 ekmakeylre asgsedvkam eqklkeaeem hillqlecek yksvlaeteg ilqrlqrsve
     1141 eeeskwkikv eesqkelkqm rsvvtslqhe verlkeenke vetlkkereh leselekaei
     1201 erstyvsevr elktqlnetl sklkvdqner ekvagdlpka qeslaalere igkvfgdanv
     1261 iensdvctds elsdkrrnvv vnltqdvghl kkllvsvsqm lskg
//
LOCUS       XP_041332683             491 aa            linear   VRT 06-MAY-2021
DEFINITION  beclin 1-associated autophagy-related key regulator [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332683
VERSION     XP_041332683.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476749.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="beclin 1-associated autophagy-related key
                     regulator"
                     /calculated_mol_wt=55186
     Region          42..382
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..491
                     /gene="ATG14"
                     /coded_by="XM_041476749.1:7..1482"
                     /db_xref="GeneID:121358516"
ORIGIN      
        1 maapsgrrpq pagpgggsga gpgalrgaee daeglyvave rcplcnttrr rltcakcvqs
       61 gdfvffdgrd serfsekker lmhlktkqre fqkhvlkame gkeitdqlrw kimsckmrie
      121 qlkqticken demtrhtegl lrikeenqkh yrraqrhqek kekiqkhnrk lgdlvekkty
      181 dlktqyehla nlrrahilel tsvifpmeev ktsmrdpadv ssesdnamts stvsklaear
      241 rttylsgrwv cddhngdtsi sitgpwiilp nngdysayyn wveekkttqg pdmehnnpah
      301 tisaalcyat qlvntlslil dvnlpkklcn sefcgenlsr hrftravkkl nanilhlcfs
      361 qhvnldllhp lhtlrnlmyl vspdtenlgr sgpfeisadl edsmefveps aagetdesgd
      421 ehvsdeetdl gtdwenlpsp rfcdipsqqv emlqsqssqv sqpiasssag gmissaaasv
      481 tswfkaytgh r
//
LOCUS       XP_041332695             448 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332695
VERSION     XP_041332695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="E3 ubiquitin-protein ligase pellino homolog 2
                     isoform X1"
                     /calculated_mol_wt=49624
     Region          13..448
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..448
                     /gene="PELI2"
                     /coded_by="XM_041476761.1:115..1461"
                     /db_xref="GeneID:121358525"
ORIGIN      
        1 mfspseeelc alnkepvkyg elvvlgyngs lpngdrgrrk srfalykrsr asgvkpstvh
       61 vistpqtskl yfscaspefq krqlkrsdvt ekaisskghh sisytlsrsq tvvveyihdr
      121 dtdmfqvgrs tespidfvvt dtisgnqnsd etqitqstis rfacrivcdr nppytarifa
      181 agfdssknif lgekaakwkn pdghmdgltt ngvlvmhpkg gfteeskpgv wreisvcgdv
      241 ytlretrsaq hrgklvenet nilqdgslid lcgatllwrt adgllhsptq khiealrqei
      301 naarpqcpvg fntlafpsmt rkdvvkkkdv eekqpwayls cghvhgyhnw ghrsdteane
      361 recpmcrtvg pyvplwlgce agfyvdagpp thaftpcghv csektakyws qiplphgtha
      421 fhaacpfcat qlsggnncvk lifqgpid
//
LOCUS       XP_041332703             425 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332703
VERSION     XP_041332703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="E3 ubiquitin-protein ligase pellino homolog 2
                     isoform X2"
                     /calculated_mol_wt=46881
     Region          13..425
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..425
                     /gene="PELI2"
                     /coded_by="XM_041476769.1:115..1392"
                     /db_xref="GeneID:121358525"
ORIGIN      
        1 mfspseeelc alnkepvkyg elvvlgyngs lpngdrgrrk srfalykrsr asgvkpstvh
       61 vistpqtska isskghhsis ytlsrsqtvv veyihdrdtd mfqvgrstes pidfvvtdti
      121 sgnqnsdetq itqstisrfa crivcdrnpp ytarifaagf dsskniflge kaakwknpdg
      181 hmdglttngv lvmhpkggft eeskpgvwre isvcgdvytl retrsaqhrg klvenetnil
      241 qdgslidlcg atllwrtadg llhsptqkhi ealrqeinaa rpqcpvgfnt lafpsmtrkd
      301 vvkkkdveek qpwaylscgh vhgyhnwghr sdteanerec pmcrtvgpyv plwlgceagf
      361 yvdagpptha ftpcghvcse ktakywsqip lphgthafha acpfcatqls ggnncvklif
      421 qgpid
//
LOCUS       XP_041332710             391 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase pellino homolog 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332710
VERSION     XP_041332710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476776.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="E3 ubiquitin-protein ligase pellino homolog 2
                     isoform X3"
                     /calculated_mol_wt=42990
     Region          13..391
                     /region_name="Pellino"
                     /note="pfam04710"
                     /db_xref="CDD:461403"
     CDS             1..391
                     /gene="PELI2"
                     /coded_by="XM_041476776.1:115..1290"
                     /db_xref="GeneID:121358525"
ORIGIN      
        1 mfspseeelc alnkepvkyg elvvlgyngs lpngdrgrrk srfalykrsr asgvkpstvh
       61 vistpqtskv grstespidf vvtdtisgnq nsdetqitqs tisrfacriv cdrnppytar
      121 ifaagfdssk niflgekaak wknpdghmdg lttngvlvmh pkggfteesk pgvwreisvc
      181 gdvytlretr saqhrgklve netnilqdgs lidlcgatll wrtadgllhs ptqkhiealr
      241 qeinaarpqc pvgfntlafp smtrkdvvkk kdveekqpwa ylscghvhgy hnwghrsdte
      301 anerecpmcr tvgpyvplwl gceagfyvda gppthaftpc ghvcsektak ywsqiplphg
      361 thafhaacpf catqlsggnn cvklifqgpi d
//
LOCUS       XP_041332723             436 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041332723
VERSION     XP_041332723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="suppressor of cytokine signaling 4"
                     /calculated_mol_wt=49630
     Region          65..111
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          271..371
                     /region_name="SH2_SOCS4"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10385"
                     /db_xref="CDD:198248"
     Site            order(279,281)
                     /site_type="other"
                     /note="Elongin-C binding interface [polypeptide binding]"
                     /db_xref="CDD:198248"
     Site            order(289,307,309,317,330)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198248"
     Site            order(340,342,360)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198248"
     Region          380..435
                     /region_name="SOCS_SOCS4"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS4-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03738"
                     /db_xref="CDD:239707"
     Site            order(381..386,392,399,405,410)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239707"
     CDS             1..436
                     /gene="SOCS4"
                     /coded_by="XM_041476789.1:237..1547"
                     /db_xref="GeneID:121358540"
ORIGIN      
        1 maenkdssak nadvrpkssr srsadrkdgy vwsgkklsws kksehcpdae tasaagrsgs
       61 nlksqerkys cssieldldr scghrflgrs lkqklqdavg qcfpikncss rhasglpskr
      121 kihiselmld kcpfpprsel afrwhlikrh tapispkaee wiiadlsqqe eredqlrdee
      181 ianggmdsps qscdftdsss srgdprpelv tgkvarssrd esdmdsddev itlctssrkr
      241 nkpkwetdde llrmetppky htqidyvhcl vpdllqinnn pcywgvmdky aaeallegkp
      301 egtfllrdsa qedylfsvsf rrysrslhar ieqwnhnfsf dahdpcvfhs pditgllehy
      361 kdpsscmffe pllstplnrt fpfslqhicr tvicncttyd gidalpipps vklylkeyhy
      421 kskvrvlrid vpeqqs
//
LOCUS       XP_041332730             436 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041332730
VERSION     XP_041332730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="suppressor of cytokine signaling 4"
                     /calculated_mol_wt=49630
     Region          65..111
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          271..371
                     /region_name="SH2_SOCS4"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10385"
                     /db_xref="CDD:198248"
     Site            order(279,281)
                     /site_type="other"
                     /note="Elongin-C binding interface [polypeptide binding]"
                     /db_xref="CDD:198248"
     Site            order(289,307,309,317,330)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198248"
     Site            order(340,342,360)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198248"
     Region          380..435
                     /region_name="SOCS_SOCS4"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS4-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03738"
                     /db_xref="CDD:239707"
     Site            order(381..386,392,399,405,410)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239707"
     CDS             1..436
                     /gene="SOCS4"
                     /coded_by="XM_041476796.1:229..1539"
                     /db_xref="GeneID:121358540"
ORIGIN      
        1 maenkdssak nadvrpkssr srsadrkdgy vwsgkklsws kksehcpdae tasaagrsgs
       61 nlksqerkys cssieldldr scghrflgrs lkqklqdavg qcfpikncss rhasglpskr
      121 kihiselmld kcpfpprsel afrwhlikrh tapispkaee wiiadlsqqe eredqlrdee
      181 ianggmdsps qscdftdsss srgdprpelv tgkvarssrd esdmdsddev itlctssrkr
      241 nkpkwetdde llrmetppky htqidyvhcl vpdllqinnn pcywgvmdky aaeallegkp
      301 egtfllrdsa qedylfsvsf rrysrslhar ieqwnhnfsf dahdpcvfhs pditgllehy
      361 kdpsscmffe pllstplnrt fpfslqhicr tvicncttyd gidalpipps vklylkeyhy
      421 kskvrvlrid vpeqqs
//
LOCUS       XP_041332739             436 aa            linear   VRT 06-MAY-2021
DEFINITION  suppressor of cytokine signaling 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041332739
VERSION     XP_041332739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="suppressor of cytokine signaling 4"
                     /calculated_mol_wt=49630
     Region          65..111
                     /region_name="SOCS"
                     /note="Suppressor of cytokine signalling; pfam12610"
                     /db_xref="CDD:432667"
     Region          271..371
                     /region_name="SH2_SOCS4"
                     /note="Src homology 2 (SH2) domain found in suppressor of
                     cytokine signaling (SOCS) proteins; cd10385"
                     /db_xref="CDD:198248"
     Site            order(279,281)
                     /site_type="other"
                     /note="Elongin-C binding interface [polypeptide binding]"
                     /db_xref="CDD:198248"
     Site            order(289,307,309,317,330)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198248"
     Site            order(340,342,360)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198248"
     Region          380..435
                     /region_name="SOCS_SOCS4"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     SOCS4-like proteins. Together with CIS1, the CIS/SOCS
                     family of proteins is characterized by the presence of a
                     C-terminal SOCS box and a central SH2 domain. The general
                     function of the SOCS box is the...; cd03738"
                     /db_xref="CDD:239707"
     Site            order(381..386,392,399,405,410)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239707"
     CDS             1..436
                     /gene="SOCS4"
                     /coded_by="XM_041476805.1:188..1498"
                     /db_xref="GeneID:121358540"
ORIGIN      
        1 maenkdssak nadvrpkssr srsadrkdgy vwsgkklsws kksehcpdae tasaagrsgs
       61 nlksqerkys cssieldldr scghrflgrs lkqklqdavg qcfpikncss rhasglpskr
      121 kihiselmld kcpfpprsel afrwhlikrh tapispkaee wiiadlsqqe eredqlrdee
      181 ianggmdsps qscdftdsss srgdprpelv tgkvarssrd esdmdsddev itlctssrkr
      241 nkpkwetdde llrmetppky htqidyvhcl vpdllqinnn pcywgvmdky aaeallegkp
      301 egtfllrdsa qedylfsvsf rrysrslhar ieqwnhnfsf dahdpcvfhs pditgllehy
      361 kdpsscmffe pllstplnrt fpfslqhicr tvicncttyd gidalpipps vklylkeyhy
      421 kskvrvlrid vpeqqs
//
LOCUS       XP_041332752            1112 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332752
VERSION     XP_041332752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476818.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 7 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1112
                     /product="LOW QUALITY PROTEIN: WD repeat and HMG-box
                     DNA-binding protein 1"
                     /calculated_mol_wt=122725
     Region          <11..289
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          17..83
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          98..134
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          139..177
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          185..225
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          233..268
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          424..694
                     /region_name="Mcl1_mid"
                     /note="Minichromosome loss protein, Mcl1, middle region;
                     pfam12341"
                     /db_xref="CDD:463539"
     Region          998..1054
                     /region_name="HMG-box_WDHD1"
                     /note="high mobility group (HMG)-box found in WD repeat
                     and HMG-box DNA-binding protein 1 (WDHD1) and similar
                     proteins; cd21993"
                     /db_xref="CDD:438809"
     Site            order(1000..1001,1003..1007,1010..1011,1018,1030..1031,
                     1034,1037..1038,1045,1049,1052)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438809"
     CDS             1..1112
                     /gene="WDHD1"
                     /coded_by="XM_041476818.1:32..3370"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 7 bases at 7
                     genomic stop codons"
                     /db_xref="GeneID:121358551"
ORIGIN      
        1 mpskqkpmry ghteghtdvc fndtgscivt cgsdgdvriw enlddddpks invgekaysc
       61 alkngrliaa vsnntvqiht fpegapdgil trftmpvnhv tfspdgtkva agssdfmikv
      121 vevtdsskqk tfrghdapvl slsfdpkdvy lasascdgsv rvwniadqtc tkswlllqkc
      181 ndvinaksic rlawqpgtgk llavpvdkvv elfrreswds qfdlsdasit qplnvvvwsp
      241 cgqflaagsv dgnlvvwnve tqqciermkh ekkysicgla whpkhkkiay tdnegnlgll
      301 enigdvekps dkvasavakd yndlfdgddd dylngdviep asspktgene ddaddlmqpp
      361 ghgrravidd dddnsldigl ikassgllek eddgddqtgg fsalppsstq qpfydgpmpt
      421 prqkpfqsgs tpvhlmhrfm vwnsvgiirc yndeqdnaid iefhdtsvhh athlpnslgh
      481 tmadlsneai llacesteel arxvmallck thnrkqgsct rlqfsseakx lcvxqxypwa
      541 tlhxnxfliq nxfsqffcfl tqslnnfflg tgfdgdqclg iqlmelgmkk rqilhgdpvs
      601 ltrksylvwv gfsaegtpcy vdsegtvrml nrglgntwip vcntrehckg kydhywvvgi
      661 hekpqqlrci pckgarfppt lprpavailp fklpycqget ekgqmeeqyw rsvlfhshmd
      721 ylskngyefd enaknqavke qqellmklfa lsckleresr cvelaelmth svlnlaikya
      781 srsrrlnlaq llsevaveka selaaaqede eeeedfpkhs sagssssatk wgqlpgrnvq
      841 qdqeveddee tdaceeaeet pevhkekepn cfskgvtsae vttpkpalva sssrgrvnpf
      901 kvssskkdpv vpsgkvldnm tkyskktsss gsraadkqnp pvikpltpkp ktkqasaasf
      961 fqprtpaanp gektveeree kagnesqeak vaaqentenr rpktgfqmwl eenraniltd
     1021 npdlneaevi kegmsrfrml tseermvwte karggrvgds aedkkrkrpt aeedevkksq
     1081 eqksedtnvs kkskpldpst nnrlssfafk qs
//
LOCUS       XP_041332766             719 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332766
VERSION     XP_041332766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..719
                     /product="exocyst complex component 5 isoform X1"
                     /calculated_mol_wt=82923
     Region          88..718
                     /region_name="Sec10"
                     /note="Exocyst complex component Sec10; pfam07393"
                     /db_xref="CDD:399988"
     CDS             1..719
                     /gene="EXOC5"
                     /coded_by="XM_041476832.1:120..2279"
                     /db_xref="GeneID:121358558"
ORIGIN      
        1 mattaelfee pfvadeyier lawrtpgggs rggeafdpkr lleefvnhiq elqvmderiq
       61 rkvekleqqc qkeakefakk vqelqksnqv afqhfqelde hisyvatkvc hlgdqlegvn
      121 tprqraveaq klmkyfnefl dgelksdvft nsekikeaad iiqklhliaq elpfdrfsev
      181 kskiaskyhd lecqliqeft saqrrgeisr mrevaavllh fkgyshcvdv yikqcqegaf
      241 lrndvfedaa ilcqrvnkqv geifsnpetv lakliqnife vklqsyvkdq leehrksdae
      301 qylknlydly trttnlsskl mefnlgtdkq tflsklikai fisylenyie veigylksrs
      361 amilqryyds knhqkrsigt ggiqihkrte aklsiqdlke rlrqrtnlpl gpsidthget
      421 flsqevvvnl lqetkqafer chrlsdpsdl pknafrifsm lveflctehi dyaletglag
      481 ipssdsknan lyfldvvhqa ntifhlfdkq fndhlmplis sspklseclq kkkdiieqme
      541 vkldmgidrt lncmvgqmkh ilaaeqkktd fkpedennvl iqytnacvkv cgyvrkqvek
      601 irnsmdgknv dtvlmelgvr fhrliyehlq qysyscmggm laicdvaeyr kcakdfkial
      661 vlqlfdtlha lcnllvvapd nlkqvcsgeq lanldknilh sfvqlrvdyr sarlarhfs
//
LOCUS       XP_041332773             707 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332773
VERSION     XP_041332773.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476839.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="exocyst complex component 5 isoform X2"
                     /calculated_mol_wt=81517
     Region          88..706
                     /region_name="Sec10"
                     /note="Exocyst complex component Sec10; pfam07393"
                     /db_xref="CDD:399988"
     CDS             1..707
                     /gene="EXOC5"
                     /coded_by="XM_041476839.1:120..2243"
                     /db_xref="GeneID:121358558"
ORIGIN      
        1 mattaelfee pfvadeyier lawrtpgggs rggeafdpkr lleefvnhiq elqvmderiq
       61 rkvekleqqc qkeakefakk vqelqksnqv afqhfqelde hisyvatkvc hlgdqlegvn
      121 tprqraveaq klmkyfnefl dgelksdvft nsekikeaad iiqklhliaq elpfdrfsev
      181 kskiaskyhd lecqliqeft saqrrgeisr mrevaavllh fkgyshcvdv yikqcqegaf
      241 lrndvfedaa ilcqrvnkqv geifsnpetv lakliqnife vklqsyvkdq leehrksdae
      301 qylknlydly trttnlsskl mefnlgtdkq tflsklikai fisylenyie veigylksrs
      361 amilqryyds knhqkrsigt ggiqdlkerl rqrtnlplgp sidthgetfl sqevvvnllq
      421 etkqaferch rlsdpsdlpk nafrifsmlv eflctehidy aletglagip ssdsknanly
      481 fldvvhqant ifhlfdkqfn dhlmplisss pklseclqkk kdiieqmevk ldmgidrtln
      541 cmvgqmkhil aaeqkktdfk pedennvliq ytnacvkvcg yvrkqvekir nsmdgknvdt
      601 vlmelgvrfh rliyehlqqy syscmggmla icdvaeyrkc akdfkialvl qlfdtlhalc
      661 nllvvapdnl kqvcsgeqla nldknilhsf vqlrvdyrsa rlarhfs
//
LOCUS       XP_041332786             752 aa            linear   VRT 06-MAY-2021
DEFINITION  armadillo-like helical domain-containing protein 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332786
VERSION     XP_041332786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..752
                     /product="armadillo-like helical domain-containing protein
                     4"
                     /calculated_mol_wt=77927
     Region          28..586
                     /region_name="ARMH4"
                     /note="Armadillo-like helical domain-containing protein 4;
                     pfam15767"
                     /db_xref="CDD:464855"
     CDS             1..752
                     /gene="ARMH4"
                     /coded_by="XM_041476852.1:10..2268"
                     /db_xref="GeneID:121358565"
ORIGIN      
        1 mrrskgfnis vltcsillls sslpclaqpl eegdvtkvqh gpwagngled ertamvdlkn
       61 nlgpseqtvs eepcavsaqp sgtpldeavt aegealpasp srvvpssqgg hpsagalpag
      121 heqelaptep qldedealra mlttavttls ppvqeesggp vgeatteggv avepssagps
      181 anplsgtave eeeeaesssh psavpqptls psspsweaag dhpatpsaqa agvtsgleml
      241 rartgsplks lapptsvaak hplvateafl hpspseagtg vtqqelptta gtvtippvdt
      301 vppdwddtkl gditqggsts heevteelgt tepsqttqeg vgeeedatra vpspvspppa
      361 pelakesnct vpvqgeelpa ttpgsstafh pgnlsdagta dlgllenisa vtaeeeksvp
      421 psqpeaavvt dtqpelsptl esswkgaaee vttaaqeavt eaaavpevpg asqgagaasf
      481 pqensgedtq mltapsatqv llatgasstg spvdaedltd gflvtsekav papggmsstp
      541 agqteepasr tvvlvtpapv assarrtsvp sarrtstagt ygldrlesee geeeeedeee
      601 eeeeeeeeee deedkdmdlm desmegdtdl pgftlpgets qeplaglenp vaqlagvsyq
      661 vpdtieweqq nqglvrswme klkdkagyms gmlvpvgvgi agalfilgal ysikmmnrrr
      721 rngskrhkrk qrefnsmqdr vmlladssed ef
//
LOCUS       XP_041332801             296 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein OTX2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332801
VERSION     XP_041332801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="homeobox protein OTX2 isoform X1"
                     /calculated_mol_wt=32158
     Region          46..101
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          160..241
                     /region_name="TF_Otx"
                     /note="Otx1 transcription factor; pfam03529"
                     /db_xref="CDD:427350"
     CDS             1..296
                     /gene="OTX2"
                     /coded_by="XM_041476867.1:1..891"
                     /db_xref="GeneID:121358571"
ORIGIN      
        1 mmsylkqppy avnglsltts gmdllhpsvg ypgplapfaa tprkqrrert tftraqldvl
       61 ealfaktryp difmreeval kinlpesrvq vwfknrrakc rqqqqqqqng gqnkvrpakk
      121 knsparevss esgtsgqftp psstsvptis sssapvsiws pasisplsdp lstssscmqr
      181 sypmtytqas gysqgyagst syfggmdcgs yltpmhhqlp gpgatlspmg anavtshlnq
      241 spaslstqgy gasslgfnst tdcldykdqt aswklnfnad cldykdqtss wkfqvl
//
LOCUS       XP_041332812             289 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein OTX2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332812
VERSION     XP_041332812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="homeobox protein OTX2 isoform X2"
                     /calculated_mol_wt=31504
     Region          39..94
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          153..234
                     /region_name="TF_Otx"
                     /note="Otx1 transcription factor; pfam03529"
                     /db_xref="CDD:427350"
     CDS             1..289
                     /gene="OTX2"
                     /coded_by="XM_041476878.1:304..1173"
                     /db_xref="GeneID:121358571"
ORIGIN      
        1 mmsylkqppy avnglsltts gmdllhpsvg ypatprkqrr erttftraql dvlealfakt
       61 rypdifmree valkinlpes rvqvwfknrr akcrqqqqqq qnggqnkvrp akkknspare
      121 vssesgtsgq ftppsstsvp tissssapvs iwspasispl sdplstsssc mqrsypmtyt
      181 qasgysqgya gstsyfggmd cgsyltpmhh qlpgpgatls pmganavtsh lnqspaslst
      241 qgygasslgf nsttdcldyk dqtaswklnf nadcldykdq tsswkfqvl
//
LOCUS       XP_041332821             486 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 35 member F4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332821
VERSION     XP_041332821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="solute carrier family 35 member F4 isoform X1"
                     /calculated_mol_wt=53860
     Region          <239..439
                     /region_name="RhaT"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; COG0697"
                     /db_xref="CDD:440461"
     CDS             1..486
                     /gene="SLC35F4"
                     /coded_by="XM_041476887.1:1..1461"
                     /db_xref="GeneID:121358580"
ORIGIN      
        1 mdgkaapngv atiedrilri tgyygyypgy ssqksasrss viqckpggnc psrhrgmtrq
       61 lsplsvaeds aapilelqnr spsgicrhsr verqsrsgee gtqthtesss qeaegqtrcq
      121 sctstflkli wrfliilsvs sswvgttqfv kitfetfdcp ffmtwfstnw nimifpiyys
      181 ghlataqekq spikkfrecs rifgedgltl klflkrtapf silwtltnyl yllalkklta
      241 tdvsalfccn kafvfllswi vlkdrfmgar ivaaimaitg ivmmayadgf qgdsiigvay
      301 avgsastsal ykvlfkmflg sanfgeaahf vstlgffnfi fisitpiily ftkveywypf
      361 savpwgylcg vaglwlafni lvnvgvvlty pilisigtvl svpgnaavdl lkhkmifsvv
      421 rlgatiiici gfllmllpee wdeitlrfin slkekksedh seditessvh trsrsranga
      481 vsipla
//
LOCUS       XP_041332830             485 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 35 member F4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332830
VERSION     XP_041332830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="solute carrier family 35 member F4 isoform X2"
                     /calculated_mol_wt=53803
     Region          <238..438
                     /region_name="RhaT"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; COG0697"
                     /db_xref="CDD:440461"
     CDS             1..485
                     /gene="SLC35F4"
                     /coded_by="XM_041476896.1:1..1458"
                     /db_xref="GeneID:121358580"
ORIGIN      
        1 mdgkaapngv atiedrilri tgyygyypgy ssqksasrss viqckpggnc psrhrgmtrq
       61 lsplsvaeds aapilelqnr spsgicrhsr verqsrseeg tqthtesssq eaegqtrcqs
      121 ctstflkliw rfliilsvss swvgttqfvk itfetfdcpf fmtwfstnwn imifpiyysg
      181 hlataqekqs pikkfrecsr ifgedgltlk lflkrtapfs ilwtltnyly llalkkltat
      241 dvsalfccnk afvfllswiv lkdrfmgari vaaimaitgi vmmayadgfq gdsiigvaya
      301 vgsastsaly kvlfkmflgs anfgeaahfv stlgffnfif isitpiilyf tkveywypfs
      361 avpwgylcgv aglwlafnil vnvgvvltyp ilisigtvls vpgnaavdll khkmifsvvr
      421 lgatiiicig fllmllpeew deitlrfins lkekksedhs editessvht rsrsrangav
      481 sipla
//
LOCUS       XP_041332839             477 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 35 member F4 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332839
VERSION     XP_041332839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="solute carrier family 35 member F4 isoform X3"
                     /calculated_mol_wt=52811
     Region          <230..430
                     /region_name="RhaT"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; COG0697"
                     /db_xref="CDD:440461"
     CDS             1..477
                     /gene="SLC35F4"
                     /coded_by="XM_041476905.1:1..1434"
                     /db_xref="GeneID:121358580"
ORIGIN      
        1 mkkhsarvap lpsynvseln spvpdgasrs sviqckpggn cpsrhrgmtr qlsplsvaed
       61 saapilelqn rspsgicrhs rverqsrsge egtqthtess sqeaegqtrc qsctstflkl
      121 iwrfliilsv ssswvgttqf vkitfetfdc pffmtwfstn wnimifpiyy sghlataqek
      181 qspikkfrec srifgedglt lklflkrtap fsilwtltny lyllalkklt atdvsalfcc
      241 nkafvfllsw ivlkdrfmga rivaaimait givmmayadg fqgdsiigva yavgsastsa
      301 lykvlfkmfl gsanfgeaah fvstlgffnf ifisitpiil yftkveywyp fsavpwgylc
      361 gvaglwlafn ilvnvgvvlt ypilisigtv lsvpgnaavd llkhkmifsv vrlgatiiic
      421 igfllmllpe ewdeitlrfi nslkekksed hseditessv htrsrsrang avsipla
//
LOCUS       XP_041332852             687 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 260 [Pyrgilauda ruficollis].
ACCESSION   XP_041332852
VERSION     XP_041332852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476918.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="transmembrane protein 260"
                     /calculated_mol_wt=76476
     Region          28..187
                     /region_name="DUF2723"
                     /note="Protein of unknown function (DUF2723); pfam11028"
                     /db_xref="CDD:463208"
     Region          <166..>352
                     /region_name="Stt3"
                     /note="Asparagine N-glycosylation enzyme, membrane subunit
                     Stt3 [Posttranslational modification, protein turnover,
                     chaperones]; COG1287"
                     /db_xref="CDD:440898"
     CDS             1..687
                     /gene="TMEM260"
                     /coded_by="XM_041476918.1:1..2064"
                     /db_xref="GeneID:121358594"
ORIGIN      
        1 mvpaeglahp aslarserdk refsvstgel itaayelgva hppgyplftl lakvatglpg
       61 gspafrvnll cgllgaaaas llfctvfrls gsyaggilaa gvfsfsrltw qwsitaevfs
      121 lnnlfvgllm altahfeeas takerskisk lgafccglsl cnqhtivlyv acvvpwvlsr
      181 lfrkkelslg hllklglcfl agllpylylp assylnrarw twgdqttfqg flthflreey
      241 gtfnlakset gssmgemllf qlaqmksels lpvlalalva cvgtallkkq qkshviwlft
      301 gmlclyslff awranldvtk plflgvverf wlqssavvav laglglatla slgrgtvleg
      361 swllpclewl salalvasql wanystcdqs nnyvidkfar nvlssmptga villrgdlpg
      421 nalrylhyce gmrpditlvd qemmtygwyl pklakhlpgv yfpgnrwnpv egalpdgtla
      481 fnlhrflkvn khkevfvcig lhegdstwrr shslwpwgtc eklvpsgavf dpgewirltr
      541 nlynwtedyg sfspssweav aneemwqarm ktaffifdla etasvtaetk aqlytfayts
      601 ykeivsshph hpvnwhknya iacermlrlg lgdpetllsq tvkhfllytq kaeddpqrqd
      661 ilqavqhlre elqglrrrka elrrkag
//
LOCUS       XP_041332867             796 aa            linear   VRT 06-MAY-2021
DEFINITION  dapper homolog 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041332867
VERSION     XP_041332867.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476933.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..796
                     /product="dapper homolog 1"
                     /calculated_mol_wt=86828
     Region          79..796
                     /region_name="Dapper"
                     /note="pfam15268"
                     /db_xref="CDD:464605"
     CDS             1..796
                     /gene="DACT1"
                     /coded_by="XM_041476933.1:1..2391"
                     /db_xref="GeneID:121358598"
ORIGIN      
        1 mvrdytvqgs rghgwsfweg qrfalphlpp srtprraddg aaaagpgqaa ggpagaprep
       61 darwrekgea eaerqrtrer leatlaglge leylrqrqel lvkslllrrp agagpgaqgg
      121 rgeppgegpp prsleekfle enilllrrql nclrrrdagl lnqlqeldkq isdlrldvek
      181 ttdehletds rpssgfyels dgasgslsns snsvfnvhpk yqcdlvskng ndiyrypspl
      241 havavqspmf llpvtenlqr eeerlacdis dvctpsetds gqsanafppq sswpapcpst
      301 skridsyils lvqkkthavr tnkprtslna datkgilrhg smcvrqpaam vahgnvvnlk
      361 sskpvclppg gapapdhtap splkqrprep ageqlesrka plpaafppgt ttelqskhlp
      421 rgvkpapsel grntaatagd vpkengqlfa aspketpgkp vvlqpenrvs qppkkillks
      481 slqaarsssp aveerpaldf ksegsssqsl ddgllvnaqy ipaqqqsmkl hkgtrnvkil
      541 kssalkhrsh langvenssq tlrekaklvg kkcrfpeeld tnkklkkpss rgkrgsglpl
      601 epslpgrqag lhrsalrshg hgrevvvakp khkradyrrw kssaeisyee alrrarrnrr
      661 egvgvysqvp lpyvspyayv asdseysaec eslfhstvvd tsedeqsnyt tncfgdsess
      721 lsevefvges tttsdsdesg gliwsqfvqt lpiqtvtape lhenaakafv kikashnlkk
      781 kilrfrsgsl klmttv
//
LOCUS       XP_041332889             320 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA box-binding protein-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041332889
VERSION     XP_041332889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="TATA box-binding protein-like 2"
                     /calculated_mol_wt=35172
     Region          143..316
                     /region_name="TBP_eukaryotes"
                     /note="eukaryotic TATA box binding protein (TBP): Present
                     in archaea and eukaryotes, TBPs are transcription factors
                     that recognize promoters and initiate transcription. TBP
                     has been shown to be an essential component of three
                     different transcription initiation...; cd04516"
                     /db_xref="CDD:239952"
     Site            order(147..148,150,177..178,182,184,191,193,197,199,201,
                     203,233,238,240,269..270,275,286,288,290,294)
                     /site_type="other"
                     /note="DNA interaction surface [nucleotide binding]"
                     /db_xref="CDD:239952"
     Site            order(162,169..171,173,178,184,186)
                     /site_type="other"
                     /note="TFIIA interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     Site            order(177,274..275,280,311..312)
                     /site_type="other"
                     /note="NC2 interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     Site            order(250..251,263..267,270,275)
                     /site_type="other"
                     /note="TFIIB interaction surface [polypeptide binding]"
                     /db_xref="CDD:239952"
     CDS             1..320
                     /gene="TBPL2"
                     /coded_by="XM_041476955.1:1..963"
                     /db_xref="GeneID:121358606"
ORIGIN      
        1 megvsplery lesgsgqddf stsphlftpm spydlelpiq assqlsqske lhtdfssvdl
       61 sflpdvtqdn keqnlsedgh etqkehdgsl pskeesgvfm desslshpga aqpspeapgv
      121 cppltpitpi tpatsasess givpqlqniv stvnlackld lknialharn aeynpkrfaa
      181 vimrireprt talifssgkm vctgakseeq srlaarkyar vvqklgfpak fldfkiqnmv
      241 gscdvrfpir leglvlthqq fssyepelfp glvyrmvkpr ivllifvsgk vvltgakdrs
      301 eiyeafeniy pilrgfkkps
//
LOCUS       XP_041332903             331 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium channel subfamily K member 16-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332903
VERSION     XP_041332903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="potassium channel subfamily K member 16-like
                     isoform X1"
                     /calculated_mol_wt=37330
     Region          <85..144
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          167..257
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..331
                     /gene="LOC121358613"
                     /coded_by="XM_041476969.1:127..1122"
                     /db_xref="GeneID:121358613"
ORIGIN      
        1 mcsgrlqtal lvagyfvyll vgaavfqale rtaekqekma aaqmkeaflq nftqltvpem
       61 eqfmknliea iqngvypvgn esqfeesnwd fsnsfffagt vvstigygtl hpktaggqif
      121 cvffalfgip lnivflhrvg kmlsllckkl gkflyekgmr kkkikfltll fflatgilvf
      181 lclpsvffqi tegwsysegi yfafitlsti gfgdyvvgkq sdrkyfsyyr vlvaiwilfg
      241 lawiallfnl lttvledtek iivkdlqqig kvskdnvgsq qrrcwpvqfi peeeqlppra
      301 ggdamkmesl tansehtkne kkcfliakll p
//
LOCUS       XP_041332914             275 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium channel subfamily K member 16-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332914
VERSION     XP_041332914.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476980.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="potassium channel subfamily K member 16-like
                     isoform X2"
                     /calculated_mol_wt=31023
     Region          <85..144
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          167..257
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..275
                     /gene="LOC121358613"
                     /coded_by="XM_041476980.1:127..954"
                     /db_xref="GeneID:121358613"
ORIGIN      
        1 mcsgrlqtal lvagyfvyll vgaavfqale rtaekqekma aaqmkeaflq nftqltvpem
       61 eqfmknliea iqngvypvgn esqfeesnwd fsnsfffagt vvstigygtl hpktaggqif
      121 cvffalfgip lnivflhrvg kmlsllckkl gkflyekgmr kkkikfltll fflatgilvf
      181 lclpsvffqi tegwsysegi yfafitlsti gfgdyvvgkq sdrkyfsyyr vlvaiwilfg
      241 lawiallfnl lttvledtek iivkdlqqig kpssw
//
LOCUS       XP_041332918             275 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium channel subfamily K member 16-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332918
VERSION     XP_041332918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476984.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="potassium channel subfamily K member 16-like
                     isoform X2"
                     /calculated_mol_wt=31023
     Region          <85..144
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          167..257
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..275
                     /gene="LOC121358613"
                     /coded_by="XM_041476984.1:127..954"
                     /db_xref="GeneID:121358613"
ORIGIN      
        1 mcsgrlqtal lvagyfvyll vgaavfqale rtaekqekma aaqmkeaflq nftqltvpem
       61 eqfmknliea iqngvypvgn esqfeesnwd fsnsfffagt vvstigygtl hpktaggqif
      121 cvffalfgip lnivflhrvg kmlsllckkl gkflyekgmr kkkikfltll fflatgilvf
      181 lclpsvffqi tegwsysegi yfafitlsti gfgdyvvgkq sdrkyfsyyr vlvaiwilfg
      241 lawiallfnl lttvledtek iivkdlqqig kpssw
//
LOCUS       XP_041332927             417 aa            linear   VRT 06-MAY-2021
DEFINITION  actin-related protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041332927
VERSION     XP_041332927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041476993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="actin-related protein 10"
                     /calculated_mol_wt=46004
     Region          16..390
                     /region_name="ASKHA_NBD_Arp10"
                     /note="nucleotide-binding domain (NBD) of actin-related
                     protein 10 (Arp10) and similar proteins; cd10207"
                     /db_xref="CDD:466813"
     CDS             1..417
                     /gene="ACTR10"
                     /coded_by="XM_041476993.1:93..1346"
                     /db_xref="GeneID:121358621"
ORIGIN      
        1 mplyeglgsg gektavvidl gqaftkcgfa getgprciip seikkpdvsk pvkvvqynin
       61 teelysylke fihmlyfrhl lvnprdrrvv iiesvlcpsh frdtltrvlf khfevpsvlf
      121 apshlmsllt lginsamvld cgyaeslvlp iyegipilsc wgslplggka ihkeleyqll
      181 eqctvdtgla kgqslpsvmg svpedivedi kvrtcfvsdl qrglkiqaak fnidgsaerp
      241 spppdvdypl dgekilhvvg pirdsvveil feqdneetsv atlildslvq cpidtrkqla
      301 enlvviggta mlpgflhrlm aeirhlvekp kykealatkt frihtppaks ncvawlggai
      361 fgalqdilgs rsvskeyysq tgripdwccl nnpplemmfd vgkappplmk rafstek
//
LOCUS       XP_041332940             344 aa            linear   VRT 06-MAY-2021
DEFINITION  cell growth regulator with RING finger domain protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332940
VERSION     XP_041332940.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477006.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="cell growth regulator with RING finger domain
                     protein 1 isoform X1"
                     /calculated_mol_wt=38839
     Region          274..311
                     /region_name="mRING-HC-C3HC5_CGRF1"
                     /note="Modified RING finger, HC subclass (C3HC5-type),
                     found in cell growth regulator with RING finger domain
                     protein 1 (CGRRF1) and similar proteins; cd16787"
                     /db_xref="CDD:438441"
     CDS             1..344
                     /gene="CGRRF1"
                     /coded_by="XM_041477006.1:163..1197"
                     /db_xref="GeneID:121358627"
ORIGIN      
        1 maavflvtly eysplfyial vsvcflvtsa lvlgwfglgv pvilrnseet esstrvlkkr
       61 mrqvknpfgl eipnpaaasv trgvtltpdc ledcvltcyw gcnvqklhea lqkhvycfri
      121 ktpqaledal yneylykqqy lqsikkndka ekycqlpeda qvvdfgpvpr aryplvallt
      181 ladeedreiy diiamvavih vpdesyrlsc rilyqyllla qgqyhdlkql fmsanspapf
      241 psdtfpgess tdrgllekag laggepelqe enskdcvvcq ngpvnwvllp crhtclcdgc
      301 ikyfqqcpmc rqfvqesfpl cskkeqdede strvlqdvlp grvf
//
LOCUS       XP_041332949             342 aa            linear   VRT 06-MAY-2021
DEFINITION  cell growth regulator with RING finger domain protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041332949
VERSION     XP_041332949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477015.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="cell growth regulator with RING finger domain
                     protein 1 isoform X2"
                     /calculated_mol_wt=38658
     Region          272..309
                     /region_name="mRING-HC-C3HC5_CGRF1"
                     /note="Modified RING finger, HC subclass (C3HC5-type),
                     found in cell growth regulator with RING finger domain
                     protein 1 (CGRRF1) and similar proteins; cd16787"
                     /db_xref="CDD:438441"
     CDS             1..342
                     /gene="CGRRF1"
                     /coded_by="XM_041477015.1:163..1191"
                     /db_xref="GeneID:121358627"
ORIGIN      
        1 maavflvtly eysplfyial vsvcflvtsa lvlgwfglgv pvilrnseet esstrvlkkr
       61 mrqvknpfgl eipnpaaasv trgvtltpdc ledcvltcyw gcnvqklhea lqkhvycfri
      121 ktpqaledal yneylykqqy fikkndkaek ycqlpedaqv vdfgpvprar yplvalltla
      181 deedreiydi iamvavihvp desyrlscri lyqylllaqg qyhdlkqlfm sanspapfps
      241 dtfpgesstd rgllekagla ggepelqeen skdcvvcqng pvnwvllpcr htclcdgcik
      301 yfqqcpmcrq fvqesfplcs kkeqdedest rvlqdvlpgr vf
//
LOCUS       XP_041332962             835 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large-associated protein 5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332962
VERSION     XP_041332962.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477028.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..835
                     /product="disks large-associated protein 5 isoform X1"
                     /calculated_mol_wt=91566
     Region          <87..290
                     /region_name="PRK05035"
                     /note="electron transport complex protein RnfC;
                     Provisional; cl47132"
                     /db_xref="CDD:481472"
     Region          <449..574
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..835
                     /gene="DLGAP5"
                     /coded_by="XM_041477028.1:190..2697"
                     /db_xref="GeneID:121358635"
ORIGIN      
        1 maatsqfasr ykkdlsteal rtkvarrksi lqkenrhklf ekgrqlglad vnvqlskerg
       61 iselketrel csqenssvkq ktapnaatkr mnerremlqr ykeekelrkl qeqrerakkg
      121 vfkvglyrpa apgflalaae epavakprek gcfqaapafs grmtrskakm qegktmiptl
      181 iptasksstv sahgqsvrst qaghkqmsta kvaekekvlq taaqpapsgr vtraaasaar
      241 qvlkptaata gnqsqrkaan vgkqkkavkp dpikiisskh evetnsgvdp gvkssaadsk
      301 hsvplelqqe qtsvennsfs prrprtrsfa pqnfvfqpls glatytvtpm spsranaflt
      361 ptavwnfsks pvkifeksse tkaqkpnlki qispvegiqe qqkttslkgg agesdertst
      421 qrsnkttpvs tavavkaddt reqehdvpyf rnilrteter llsqclqweg nleldipeda
      481 kdqirstvgq trlligerfk qfeglvdnce fkrgekkttc tdldgfwdmi nfqiedvnkk
      541 fdnlvklqdn ewqpldvpsk avvkkkavps gvpkaeleaa araaarsrla svkaamrdrm
      601 kqgeaaegtq qerlpevekv vfeagffrie spvknfsgll prtpgklanp rssrsllssp
      661 lcnpedapak ktpsalkgfh paqslkmdql pteqtppldk lpegleqsts vvaeemclva
      721 gtaegnkvlg sssseskavd smeemelsaa eqeqdiimcs peketnsaqs gepqthqtdv
      781 sctdlalidr npfdmpmlda elpftpvktk aqkfaaaevf sdlivfspvg psgdh
//
LOCUS       XP_041332966             835 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large-associated protein 5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332966
VERSION     XP_041332966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..835
                     /product="disks large-associated protein 5 isoform X1"
                     /calculated_mol_wt=91566
     Region          <87..290
                     /region_name="PRK05035"
                     /note="electron transport complex protein RnfC;
                     Provisional; cl47132"
                     /db_xref="CDD:481472"
     Region          <449..574
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..835
                     /gene="DLGAP5"
                     /coded_by="XM_041477032.1:110..2617"
                     /db_xref="GeneID:121358635"
ORIGIN      
        1 maatsqfasr ykkdlsteal rtkvarrksi lqkenrhklf ekgrqlglad vnvqlskerg
       61 iselketrel csqenssvkq ktapnaatkr mnerremlqr ykeekelrkl qeqrerakkg
      121 vfkvglyrpa apgflalaae epavakprek gcfqaapafs grmtrskakm qegktmiptl
      181 iptasksstv sahgqsvrst qaghkqmsta kvaekekvlq taaqpapsgr vtraaasaar
      241 qvlkptaata gnqsqrkaan vgkqkkavkp dpikiisskh evetnsgvdp gvkssaadsk
      301 hsvplelqqe qtsvennsfs prrprtrsfa pqnfvfqpls glatytvtpm spsranaflt
      361 ptavwnfsks pvkifeksse tkaqkpnlki qispvegiqe qqkttslkgg agesdertst
      421 qrsnkttpvs tavavkaddt reqehdvpyf rnilrteter llsqclqweg nleldipeda
      481 kdqirstvgq trlligerfk qfeglvdnce fkrgekkttc tdldgfwdmi nfqiedvnkk
      541 fdnlvklqdn ewqpldvpsk avvkkkavps gvpkaeleaa araaarsrla svkaamrdrm
      601 kqgeaaegtq qerlpevekv vfeagffrie spvknfsgll prtpgklanp rssrsllssp
      661 lcnpedapak ktpsalkgfh paqslkmdql pteqtppldk lpegleqsts vvaeemclva
      721 gtaegnkvlg sssseskavd smeemelsaa eqeqdiimcs peketnsaqs gepqthqtdv
      781 sctdlalidr npfdmpmlda elpftpvktk aqkfaaaevf sdlivfspvg psgdh
//
LOCUS       XP_041332974             834 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large-associated protein 5 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332974
VERSION     XP_041332974.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477040.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..834
                     /product="disks large-associated protein 5 isoform X2"
                     /calculated_mol_wt=91495
     Region          <87..290
                     /region_name="PRK05035"
                     /note="electron transport complex protein RnfC;
                     Provisional; cl47132"
                     /db_xref="CDD:481472"
     Region          <448..573
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..834
                     /gene="DLGAP5"
                     /coded_by="XM_041477040.1:190..2694"
                     /db_xref="GeneID:121358635"
ORIGIN      
        1 maatsqfasr ykkdlsteal rtkvarrksi lqkenrhklf ekgrqlglad vnvqlskerg
       61 iselketrel csqenssvkq ktapnaatkr mnerremlqr ykeekelrkl qeqrerakkg
      121 vfkvglyrpa apgflalaae epavakprek gcfqaapafs grmtrskakm qegktmiptl
      181 iptasksstv sahgqsvrst qaghkqmsta kvaekekvlq taaqpapsgr vtraaasaar
      241 qvlkptaata gnqsqrkaan vgkqkkavkp dpikiisskh evetnsgvdp gvkssaadsk
      301 hsvplelqqe qtsvennsfs prrprtrsfa pqnfvfqpls glatytvtpm spsranaflt
      361 ptavwnfsks pvkifeksse tkaqkpnlki qispvegiqe qqkttslkgg gesdertstq
      421 rsnkttpvst avavkaddtr eqehdvpyfr nilrteterl lsqclqwegn leldipedak
      481 dqirstvgqt rlligerfkq feglvdncef krgekkttct dldgfwdmin fqiedvnkkf
      541 dnlvklqdne wqpldvpska vvkkkavpsg vpkaeleaaa raaarsrlas vkaamrdrmk
      601 qgeaaegtqq erlpevekvv feagffries pvknfsgllp rtpgklanpr ssrsllsspl
      661 cnpedapakk tpsalkgfhp aqslkmdqlp teqtppldkl pegleqstsv vaeemclvag
      721 taegnkvlgs ssseskavds meemelsaae qeqdiimcsp eketnsaqsg epqthqtdvs
      781 ctdlalidrn pfdmpmldae lpftpvktka qkfaaaevfs dlivfspvgp sgdh
//
LOCUS       XP_041332982             831 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large-associated protein 5 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332982
VERSION     XP_041332982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..831
                     /product="disks large-associated protein 5 isoform X3"
                     /calculated_mol_wt=91131
     Region          <445..570
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..831
                     /gene="DLGAP5"
                     /coded_by="XM_041477048.1:190..2685"
                     /db_xref="GeneID:121358635"
ORIGIN      
        1 maatsqfasr ykkdlsteal rtkvarrksi lqkenrhklf ekgrqlglad vnvqlskerg
       61 iselketrel csqenssvkq ktapnaatkr mnerremlqr ykeekelrkl qeqrerakkg
      121 vfkvglyrpa apgflalaae epavakprek aapafsgrmt rskakmqegk tmiptlipta
      181 sksstvsahg qsvrstqagh kqmstakvae kekvlqtaaq papsgrvtra aasaarqvlk
      241 ptaatagnqs qrkaanvgkq kkavkpdpik iisskhevet nsgvdpgvks saadskhsvp
      301 lelqqeqtsv ennsfsprrp rtrsfapqnf vfqplsglat ytvtpmspsr anafltptav
      361 wnfskspvki fekssetkaq kpnlkiqisp vegiqeqqkt tslkggages dertstqrsn
      421 kttpvstava vkaddtreqe hdvpyfrnil rteterllsq clqwegnlel dipedakdqi
      481 rstvgqtrll igerfkqfeg lvdncefkrg ekkttctdld gfwdminfqi edvnkkfdnl
      541 vklqdnewqp ldvpskavvk kkavpsgvpk aeleaaaraa arsrlasvka amrdrmkqge
      601 aaegtqqerl pevekvvfea gffriespvk nfsgllprtp gklanprssr sllssplcnp
      661 edapakktps alkgfhpaqs lkmdqlpteq tppldklpeg leqstsvvae emclvagtae
      721 gnkvlgssss eskavdsmee melsaaeqeq diimcspeke tnsaqsgepq thqtdvsctd
      781 lalidrnpfd mpmldaelpf tpvktkaqkf aaaevfsdli vfspvgpsgd h
//
LOCUS       XP_041332989             830 aa            linear   VRT 06-MAY-2021
DEFINITION  disks large-associated protein 5 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041332989
VERSION     XP_041332989.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477055.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..830
                     /product="disks large-associated protein 5 isoform X4"
                     /calculated_mol_wt=91060
     Region          <444..569
                     /region_name="GKAP"
                     /note="Guanylate-kinase-associated protein (GKAP) protein;
                     pfam03359"
                     /db_xref="CDD:460897"
     CDS             1..830
                     /gene="DLGAP5"
                     /coded_by="XM_041477055.1:190..2682"
                     /db_xref="GeneID:121358635"
ORIGIN      
        1 maatsqfasr ykkdlsteal rtkvarrksi lqkenrhklf ekgrqlglad vnvqlskerg
       61 iselketrel csqenssvkq ktapnaatkr mnerremlqr ykeekelrkl qeqrerakkg
      121 vfkvglyrpa apgflalaae epavakprek aapafsgrmt rskakmqegk tmiptlipta
      181 sksstvsahg qsvrstqagh kqmstakvae kekvlqtaaq papsgrvtra aasaarqvlk
      241 ptaatagnqs qrkaanvgkq kkavkpdpik iisskhevet nsgvdpgvks saadskhsvp
      301 lelqqeqtsv ennsfsprrp rtrsfapqnf vfqplsglat ytvtpmspsr anafltptav
      361 wnfskspvki fekssetkaq kpnlkiqisp vegiqeqqkt tslkgggesd ertstqrsnk
      421 ttpvstavav kaddtreqeh dvpyfrnilr teterllsqc lqwegnleld ipedakdqir
      481 stvgqtrlli gerfkqfegl vdncefkrge kkttctdldg fwdminfqie dvnkkfdnlv
      541 klqdnewqpl dvpskavvkk kavpsgvpka eleaaaraaa rsrlasvkaa mrdrmkqgea
      601 aegtqqerlp evekvvfeag ffriespvkn fsgllprtpg klanprssrs llssplcnpe
      661 dapakktpsa lkgfhpaqsl kmdqlpteqt ppldklpegl eqstsvvaee mclvagtaeg
      721 nkvlgsssse skavdsmeem elsaaeqeqd iimcspeket nsaqsgepqt hqtdvsctdl
      781 alidrnpfdm pmldaelpft pvktkaqkfa aaevfsdliv fspvgpsgdh
//
LOCUS       XP_041333001             239 aa            linear   VRT 06-MAY-2021
DEFINITION  GTP cyclohydrolase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333001
VERSION     XP_041333001.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477067.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..239
                     /product="GTP cyclohydrolase 1"
                     /calculated_mol_wt=26396
     Region          55..239
                     /region_name="GTP_cyclohydro1"
                     /note="GTP cyclohydrolase I (GTP-CH-I) catalyzes the
                     conversion of GTP into dihydroneopterin triphosphate. The
                     enzyme product is the precursor of tetrahydrofolate in
                     eubacteria, fungi, and plants and of the folate analogs in
                     methanogenic bacteria. In...; cd00642"
                     /db_xref="CDD:238349"
     Site            order(55..56,59..60,63,67,70..71,73,75,77,79..81,83..84,
                     86,90,93,98,109,111,115..118,120..123,125,127,131..132,
                     135..136,138,140,147..148,150,154..156,159,169..171,173,
                     176,186,199..201,204..205,210..211,213..215,217..219,
                     224..225,228,230..232)
                     /site_type="other"
                     /note="homodecamer interface [polypeptide binding]"
                     /db_xref="CDD:238349"
     Site            order(86,89,130,132..133,152,154..155,159,170..172,199,
                     201,205)
                     /site_type="active"
                     /db_xref="CDD:238349"
     Site            order(130,132..133,199,201)
                     /site_type="active"
                     /note="putative catalytic site residues [active]"
                     /db_xref="CDD:238349"
     Site            order(130,132..133,201)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238349"
     Site            order(180,183,189,191,220..222,224..228)
                     /site_type="active"
                     /note="GTP-CH-I/GFRP interaction surface [active]"
                     /db_xref="CDD:238349"
     CDS             1..239
                     /gene="GCH1"
                     /coded_by="XM_041477067.1:37..756"
                     /db_xref="GeneID:121358667"
ORIGIN      
        1 meaargwngy arrerpppsp paaaekprvp pgsgtgsgge gwrgerprse ednelslpsl
       61 aaaytsilra lgedpqrqgl lktpwraata mqfftkgyqe tiadvlndai fdedhdemvi
      121 vkdidmfslc ehhlvpfvgk vhigylpnkq vlglsklari veiysrrlqv qerltkqiav
      181 aitealqpag vgvvveathm cmvmrgvqkm nsktvtstml gvfredpktr eefltlirs
//
LOCUS       XP_041333013             487 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-5 complex subunit mu-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333013
VERSION     XP_041333013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..487
                     /product="AP-5 complex subunit mu-1"
                     /calculated_mol_wt=53970
     Region          194..479
                     /region_name="AP_MuD_MHD"
                     /note="Mu-homology domain (MHD) of a adaptor protein (AP)
                     encoded by mu-2 related death-inducing gene, MuD (also
                     known as MUDENG); cd09256"
                     /db_xref="CDD:271164"
     CDS             1..487
                     /gene="AP5M1"
                     /coded_by="XM_041477079.1:53..1516"
                     /db_xref="GeneID:121358676"
ORIGIN      
        1 malralwllr hdpaaggavl fsrryptvel raqtfngsth vpipsdsafl kallfelrlv
       61 dehvfveqrd tctrinhscv hsvssaagel wpvlafhksg liyacvplve gsleprppll
      121 tvsglsqgla lllgimdyvs psrkneaels akvgqlrnll iqacplgtpl ntnirslnss
      181 fediqempad keqpawrsss ykgkpqvhvc itekvkcmqy dqrdvvdtwq vygavnckcd
      241 iegsapnvtl sltlptnapp lqdivvhhcv tsvdpamlms tsaeplhdsv yngpykfpfi
      301 ppsdsfdlcy ytsqvpvppi lgcyqlveeg sqikitvhlk lhesiknsfe ycearipffn
      361 rgpiaqleyk vsygqldlsr eksllvwvig qkfpkslevs ltgtvsfgta gkehptdyvc
      421 tgntayvkly fripdftltg cyvdqhsvqi fvpgkpkita srelissdyy iwnskapapm
      481 vykplld
//
LOCUS       XP_041333026             366 aa            linear   VRT 06-MAY-2021
DEFINITION  galectin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333026
VERSION     XP_041333026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="galectin-3 isoform X1"
                     /calculated_mol_wt=36927
     Region          <85..234
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          232..362
                     /region_name="GLECT"
                     /note="Galectin/galactose-binding lectin. This domain
                     exclusively binds beta-galactosides, such as lactose, and
                     does not require metal ions for activity. GLECT domains
                     occur as homodimers or tandemly repeated domains. They are
                     developmentally regulated and may...; cd00070"
                     /db_xref="CDD:238025"
     Site            order(233..237,357..362)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            233..237
                     /site_type="active"
                     /note="dimerization swap strand [active]"
                     /db_xref="CDD:238025"
     Site            order(242..244,247,250,319..321,326,328,331)
                     /site_type="other"
                     /note="putative alternate dimerization interface
                     [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            order(273,275,277,287,289,296,299,301)
                     /site_type="other"
                     /note="sugar binding pocket [chemical binding]"
                     /db_xref="CDD:238025"
     CDS             1..366
                     /gene="LGALS3"
                     /coded_by="XM_041477092.1:60..1160"
                     /db_xref="GeneID:121358679"
ORIGIN      
        1 mspltggntr lsgavtgvpg agtapapapa psppragpaa srsrsaepph agfgpgfalw
       61 hrscqlcwag kmsdgfslsd alansnnpap cappaqgwps wgnqpaapga fpgypgapga
      121 ypgapgaypg apgaypgapg tcnpgpgayp aapgaypgap gaypggpagp gaypgapgaf
      181 pgappatgpy ptpgqpssgp gfgpsapqgg ptapqggpta pqggptppmk vpfelplqag
      241 lvprllitit gtvnpnpnrf sldfkrgndv afhfnprfne dnrkvivcns mfqntwgkee
      301 rtaprfpfea gkpfklqvlc etdhfkvavn dahllqynfr ekrlnevtkl ciggdialts
      361 vvptmi
//
LOCUS       XP_041333033             295 aa            linear   VRT 06-MAY-2021
DEFINITION  galectin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333033
VERSION     XP_041333033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="galectin-3 isoform X2"
                     /calculated_mol_wt=29986
     Region          <14..163
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          161..291
                     /region_name="GLECT"
                     /note="Galectin/galactose-binding lectin. This domain
                     exclusively binds beta-galactosides, such as lactose, and
                     does not require metal ions for activity. GLECT domains
                     occur as homodimers or tandemly repeated domains. They are
                     developmentally regulated and may...; cd00070"
                     /db_xref="CDD:238025"
     Site            order(162..166,286..291)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            162..166
                     /site_type="active"
                     /note="dimerization swap strand [active]"
                     /db_xref="CDD:238025"
     Site            order(171..173,176,179,248..250,255,257,260)
                     /site_type="other"
                     /note="putative alternate dimerization interface
                     [polypeptide binding]"
                     /db_xref="CDD:238025"
     Site            order(202,204,206,216,218,225,228,230)
                     /site_type="other"
                     /note="sugar binding pocket [chemical binding]"
                     /db_xref="CDD:238025"
     CDS             1..295
                     /gene="LGALS3"
                     /coded_by="XM_041477099.1:226..1113"
                     /db_xref="GeneID:121358679"
ORIGIN      
        1 msdgfslsda lansnnpapc appaqgwpsw gnqpaapgaf pgypgapgay pgapgaypga
       61 pgaypgapgt cnpgpgaypa apgaypgapg aypggpagpg aypgapgafp gappatgpyp
      121 tpgqpssgpg fgpsapqggp tapqggptap qggptppmkv pfelplqagl vprllititg
      181 tvnpnpnrfs ldfkrgndva fhfnprfned nrkvivcnsm fqntwgkeer taprfpfeag
      241 kpfklqvlce tdhfkvavnd ahllqynfre krlnevtklc iggdialtsv vptmi
//
LOCUS       XP_041333045             228 aa            linear   VRT 06-MAY-2021
DEFINITION  proteasome subunit alpha type-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041333045
VERSION     XP_041333045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="proteasome subunit alpha type-3"
                     /calculated_mol_wt=25426
     Region          1..190
                     /region_name="proteasome_alpha_type_3"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...;
                     cd03751"
                     /db_xref="CDD:239720"
     Site            order(8,24,26,39,141)
                     /site_type="active"
                     /db_xref="CDD:239720"
     CDS             1..228
                     /gene="PSMA3"
                     /coded_by="XM_041477111.1:105..791"
                     /db_xref="GeneID:121358693"
ORIGIN      
        1 mkavenssta igirckdgvv fgveklvlsk lyeegsnkrl fnvdrhvgma vaglladars
       61 ladiareeas nfrsnygydi plkhladrva myvhaytlys avrpfgcsfm lgsydsddga
      121 qlymidpsgv sygywgcaig karqaaktei eklqmkemtc rdvvkevaki iyivhdevkd
      181 kafelelswv geitngkhei vpkdireeae kyakeslkee desdddnm
//
LOCUS       XP_041333110             285 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein CCDC198 [Pyrgilauda ruficollis].
ACCESSION   XP_041333110
VERSION     XP_041333110.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477176.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509211.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..285
                     /product="uncharacterized protein CCDC198"
                     /calculated_mol_wt=32520
     Region          1..276
                     /region_name="DUF4619"
                     /note="Domain of unknown function (DUF4619); pfam15398"
                     /db_xref="CDD:464705"
     CDS             1..285
                     /gene="CCDC198"
                     /coded_by="XM_041477176.1:19..876"
                     /db_xref="GeneID:121358737"
ORIGIN      
        1 mglssskarp rvtrvapvsp rgdvpplaal qelpgepgqp pawgkpkfql elpplretwy
       61 grasagplsw nplpgqdgts iikqhpprrp qrlepaippq aimpakpwsq peaaaspkpk
      121 vlekrgqsln plpgrrqhlh klqmldltrk rreaelkrnl hreakineqn fkkfspkdvl
      181 dtpqrgdstr spdpipaehn qrfpeddpgn twggglcrve pspdrrgkad lwfcreprtr
      241 dpfwdsssts seewereerm hhkprlvrtk terfslfddf fdrdf
//
LOCUS       XP_041333135             111 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerase III subunit RPC3-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333135
VERSION     XP_041333135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477201.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509223.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>111
                     /product="DNA-directed RNA polymerase III subunit
                     RPC3-like"
     Region          7..65
                     /region_name="HTH_9"
                     /note="RNA polymerase III subunit RPC82 helix-turn-helix
                     domain; pfam08221"
                     /db_xref="CDD:400500"
     CDS             1..111
                     /gene="LOC121358758"
                     /coded_by="XM_041477201.1:126..>458"
                     /db_xref="GeneID:121358758"
ORIGIN      
        1 mtqaelrlcs lllqehfgei vekvgnsllr tgprplrllv gdtgllpdqv kkalcvliqh
       61 glaryeaqpr gpveyeargr rvlrllrypr yiytakalyg dpgellveel l
//
LOCUS       XP_041333147             370 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF115-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333147
VERSION     XP_041333147.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477213.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509223.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
                     RNF115-like"
                     /calculated_mol_wt=40312
     Region          100..130
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     Region          299..348
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(301,304,319,321,324,327,338,341)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..370
                     /gene="LOC121358764"
                     /coded_by="XM_041477213.1:1..1113"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 3 bases in 2 codons;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121358764"
ORIGIN      
        1 mttapcclhf rlrhfrcrhp axlgsqwexl ppggatprpa plgtlypaqp rfagwgrsrr
       61 vrrkrgaalg rarcsgrsdg sggcxgkmae aaaaavqqhr ffchsckgev spklpeytcp
      121 rcesgfieev tddssffdsn slddspssqf selwdhldha mffpdlrpll eaegreaerg
      181 paaelwgpgr pprlalprry rargsarper spaiegiiqq ifagffansa vpgsqhpfsw
      241 sgmlhsspgd yawgqsglda ivtqllgqle ntgpppadke risslptvpv tqeqvdtgle
      301 cpvckedytv aeqvrqlpcn hvfhsscivp wlelhdtcpv crkslkgeds srqipnpdss
      361 dspvqerwtf
//
LOCUS       XP_041333158             147 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 14J1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041333158
VERSION     XP_041333158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477224.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509255.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..147
                     /product="olfactory receptor 14J1-like"
     Region          <1..129
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          31..54
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          73..95
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          104..129
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..147
                     /gene="LOC121358773"
                     /coded_by="XM_041477224.1:<1..444"
                     /db_xref="GeneID:121358773"
ORIGIN      
        1 slplchgnal dqffceipqi lklscssylr elgliavsas lvsgcflfiv fsyvqifrav
       61 lripseqgrh kafstclphl avvslfistv ifahlkppsi sspsldlsvs vlysvmppal
      121 npfiyslrnq elkdtlrkim tvsfqkq
//
LOCUS       XP_041333169             366 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger and BTB domain-containing protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333169
VERSION     XP_041333169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477235.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509256.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="zinc finger and BTB domain-containing protein 3"
                     /calculated_mol_wt=38754
     Region          1..131
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          301..321
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          314..338
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          329..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..366
                     /gene="ZBTB3"
                     /coded_by="XM_041477235.1:54..1154"
                     /db_xref="GeneID:121358780"
ORIGIN      
        1 mefpehsrql lrglreqrsr gilcdctvlv gtapfpahra vlaacssffh lcyaepggag
       61 gargavvaln sdivtapafa lllefmyegr lalaapledv laaasylhmn dvvklckkkl
      121 qargpaeads tkreeeeeee dapsppppqp pphgqgqdtr pgcggtagdg hppgthraag
      181 kplllislgg aagprpprsa pwagglqvpr dpphprgwrg rgspegppsp rrwqhpphrp
      241 pplrgarsai plpppppara agfgegaalg palgglrepl flapleprgg fglfaeeapt
      301 cptcgktfsc sytlrrhatv htrerpyecr hclrsytqsg dlyrhvrkah spggpargpr
      361 dgdnpp
//
LOCUS       XP_041333181             369 aa            linear   VRT 06-MAY-2021
DEFINITION  neutral alpha-glucosidase AB-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041333181
VERSION     XP_041333181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477247.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509256.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>369
                     /product="neutral alpha-glucosidase AB-like"
     Region          290..361
                     /region_name="Gal_mutarotas_2"
                     /note="Galactose mutarotase-like; pfam13802"
                     /db_xref="CDD:463987"
     CDS             1..369
                     /gene="LOC121358788"
                     /coded_by="XM_041477247.1:1..>1107"
                     /db_xref="GeneID:121358788"
ORIGIN      
        1 mseeagrcyg sprggataes siliglegvs lsipalsldf cpaltvgadp rwplwlslcl
       61 gaslavdrgn fktceqsgfc rrqrriqpgs spyrallgsl elgpdvariq lvneatqvpl
      121 llevwgltgn vtrlriqela plrpryqvpd vllgeppaer levtgrdegt lelslgpggh
      181 rllvterpfr ldllrhrell csvnargllv fehqrrrrds dppkdppgee gaaqegpedg
      241 agstqsekpa eppaepeeep gtweetfkth tdskpygpts vgldfslpgf ehvygipeha
      301 dslrlrpteg gdpyrlynld vfqyevftpm alygsvplll ahrprlslgl fwlnaaetwv
      361 digsntagk
//
LOCUS       XP_041333195             627 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic tRNA 2-thiolation protein 1, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333195
VERSION     XP_041333195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477261.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509267.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..627
                     /product="cytoplasmic tRNA 2-thiolation protein 1"
     Region          10..>156
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     Region          329..>547
                     /region_name="PRK08581"
                     /note="amidase domain-containing protein"
                     /db_xref="CDD:236304"
     Region          <537..573
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     CDS             1..627
                     /gene="CTU1"
                     /coded_by="XM_041477261.1:<1..1884"
                     /db_xref="GeneID:121358795"
ORIGIN      
        1 spslcpqppw gcprpghsva vaasggkdst vlahllarle rahglglrla llgvdegiag
       61 yrdqalgvlr avgaglplpl llvshrelfg wgvdelggll ggrsrctvcg vfrrhalera
      121 aremgadwia tghnaddvae tvlmnflrgd varlrraane awgatnaawg ataatngatt
      181 atndsmatng vttatngtva tnegsvattd tngatnvsga theatvatng tvatkegsga
      241 tsegsgatne attvkedvva tdmvsaands devtvatrev tvatrgsraa ppasmassgp
      301 teakdgqrkv lggsprdcpe epaellgkst etvenstgvl gsstelnqnp teslenptep
      361 lenptepnqn sikalgnpte pnedpikpne nsttvsenat evnesrtrln ddprkpnenp
      421 tkanensmkp ndnptkvnen stkrnenpmk pnensmkpne vstklnenst kpnknsmkpl
      481 ensmkpnkns tkldknptkp nktstkpnkt stkpnknptq ptkpprtpva aapwptvprl
      541 kplrhaaqke ivlyahfrgl pyasaecrha plafrghpra llkeleaarp lrvategggp
      601 wdrggqgggg hqdgggghwe ggdrgew
//
LOCUS       XP_041333207             342 aa            linear   VRT 06-MAY-2021
DEFINITION  salivary glue protein Sgs-3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041333207
VERSION     XP_041333207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477273.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509267.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="salivary glue protein Sgs-3-like"
                     /calculated_mol_wt=34450
     CDS             1..342
                     /gene="LOC121358803"
                     /coded_by="XM_041477273.1:1..1029"
                     /db_xref="GeneID:121358803"
ORIGIN      
        1 msqnvpkecp qecpqecpre cpqecprcps evpdvaqppp ggprarpava egaeaaplra
       61 sgaalqlhlh ppataatrgd tgatnratkt lglvvtvatk plglvvtrtl stvatrtlgl
      121 vvsgatktlg lvatktlsvv vtvvtktltl vvtvatsspl gevttgrltt gpagtaamas
      181 aalatnpilv atnpilvatt platiqvtad hlvttptatt pilvatdslt ttslattpil
      241 vttnpwttiq vttdtlvttp tattplatip vttdpltsip vttdpltsip vttdpltsip
      301 vttdpltttp vatkplttts laitsilvtt dplttipgpl tp
//
LOCUS       XP_041333220             186 aa            linear   VRT 06-MAY-2021
DEFINITION  mas-related G-protein coupled receptor member D-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333220
VERSION     XP_041333220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509269.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>186
                     /product="mas-related G-protein coupled receptor member
                     D-like"
     Region          1..>185
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          19..41
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          62..82
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          105..122
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          143..166
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..186
                     /gene="LOC121358811"
                     /coded_by="XM_041477286.1:<1..>558"
                     /db_xref="GeneID:121358811"
ORIGIN      
        1 cglagngafl rllhinantd fvfnqaitdf lfliimvpst llflveevsc saimplmyls
       61 flfylslfsy tmglyrlmfi siqrcrsilc lffcgcqlpe rlvlvvmsvl fwvllfvvta
      121 vnptvtsqcq sheqeqcrva ltsmyalnlf lfaapmvisc tilfihfkpg sqqqqhmrld
      181 iviflv
//
LOCUS       XP_041333231             207 aa            linear   VRT 06-MAY-2021
DEFINITION  structural maintenance of chromosomes protein 1A-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333231
VERSION     XP_041333231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509278.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>207
                     /product="structural maintenance of chromosomes protein
                     1A-like"
     Region          <4..206
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <115..206
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            126..135
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213242"
     Site            150..155
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213242"
     Site            158..161
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213242"
     Site            183..189
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213242"
     CDS             1..207
                     /gene="LOC121358818"
                     /coded_by="XM_041477297.1:45..>665"
                     /db_xref="GeneID:121358818"
ORIGIN      
        1 maalqqrlte qqsvlqriaa pnmkamekle svrdkfqets defeaarkra kkakqafeqm
       61 kkerfdrfns cfeavatnid eiykalsrns saqaflgpen peepyldgin yncvapgkrf
      121 rpmdnlsgge ktvaalallf aihsykpapf fvldeidaal dntnigkvan yikeqsaanf
      181 qaivislkee fytkaqslig vypevqp
//
LOCUS       XP_041333242             286 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
            subunit C-like [Pyrgilauda ruficollis].
ACCESSION   XP_041333242
VERSION     XP_041333242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477308.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509289.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..286
                     /product="serine/threonine-protein phosphatase 6
                     regulatory ankyrin repeat subunit C-like"
                     /calculated_mol_wt=30687
     Region          1..262
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(27,31..32,35..37,39..40,44,47,56,58,60,64..65,
                     68..70,72..73,77,80,89,91,93,97..98,101..103,105..106,110,
                     113,122)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          27..56
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          58..89
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          91..122
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          124..155
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          157..185
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          190..219
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          224..255
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          257..283
                     /region_name="ANK"
                     /note="ankyrin repeats; smart00248"
                     /db_xref="CDD:197603"
     Region          257..282
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..286
                     /gene="LOC121358827"
                     /coded_by="XM_041477308.1:1..861"
                     /db_xref="GeneID:121358827"
ORIGIN      
        1 magtaqkalh lllkhsadvn ardkhwqtpl hvaaanratk cvealvplls tvnvadrtgr
       61 talhhavhsg hlemvnllln kgaspstcdk kdrqplhwaa flghlevlkl lvargadvmc
      121 kdrkgytllh taaasgqiev vrhllrlgve idepnsfgnt alhiacymgq davanelvnv
      181 ganvnqpnek gftplhfaav stngalclei lvnngadvnf qskegksplh maaihgrftr
      241 sqiliqngse idcadkygnt plhvaarygh ellistlmtn gadtar
//
LOCUS       XP_041333251             326 aa            linear   VRT 06-MAY-2021
DEFINITION  death domain-associated protein 6-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333251
VERSION     XP_041333251.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477317.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509300.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>326
                     /product="death domain-associated protein 6-like"
     Region          39..238
                     /region_name="DAXX_histone_binding"
                     /note="Histone binding domain of the death-domain
                     associated protein (DAXX); cd13150"
                     /db_xref="CDD:240523"
     Site            order(51..52,55,58..59,61..67,71..74,76..79,81..82,85,
                     88..89,92,105..107,137..141,144,171,175..176,179,182,
                     185..186,189..190,192..194,196,223,226..227,230..231,
                     233..234,237..238)
                     /site_type="other"
                     /note="Histone H3.3 interface [polypeptide binding]"
                     /db_xref="CDD:240523"
     Site            order(65,137,139,142,183,186..187,190,195,202..205,208,
                     211,215,218,222,225..226,229..230,233,237)
                     /site_type="other"
                     /note="Histone H4 interface [polypeptide binding]"
                     /db_xref="CDD:240523"
     CDS             1..326
                     /gene="LOC121358835"
                     /coded_by="XM_041477317.1:<1..>981"
                     /codon_start=3
                     /db_xref="GeneID:121358835"
ORIGIN      
        1 vsrciadpga psqhpgapag gpgqqpcpae aasprraggs rrqirhlehl lrvyageirr
       61 lqereldlae ldsadspylq enrlkrrmmr ifrrlcqlkd cssltgrvle qrirfrgtry
      121 pevnrsierf inrpdafpdy sdilreirga sarhglglgr rqmenmaqev frevgnrlqe
      181 rrhldlvynf gshltdeyrp gtdpalsdpe laqrlrrnrr lalarlddvi arfaqrqerh
      241 rdgdgarrrp rkggsrrkde eeeeedeeee edeeeeeeee eeedeeeeee eeegesseae
      301 grvkvkeeee teeeeeeegr eataaq
//
LOCUS       XP_041333263             276 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333263
VERSION     XP_041333263.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477329.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=31468
     Region          58..267
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
     Site            order(139..140,142,172,180,184)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(139..140,184)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            172
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..276
                     /gene="LOC121358840"
                     /coded_by="XM_041477329.1:665..1495"
                     /db_xref="GeneID:121358840"
ORIGIN      
        1 mlgllllqvl asclwlghse vvksfetscp qfffreippn ealepqkpaw icqryknqyy
       61 fatlydrkmr ipvysayiyq pgpgkrpktw lvepqligpt ypktmekewt llnhynvtle
      121 klsqsqailh dyknltglnr ghlnpnghhd dyssrmatft ltnivpqdek lnggawnnye
      181 qqtmirrtqg ctttyvvvga vpgnnyiakg rvnkpshlws aaccvvdnny ikawaviaen
      241 dknevelltl geledtltel ygrgqvslfd sdcpre
//
LOCUS       XP_041333270             276 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333270
VERSION     XP_041333270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=31468
     Region          58..267
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
     Site            order(139..140,142,172,180,184)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(139..140,184)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            172
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..276
                     /gene="LOC121358840"
                     /coded_by="XM_041477336.1:5319..6149"
                     /db_xref="GeneID:121358840"
ORIGIN      
        1 mlgllllqvl asclwlghse vvksfetscp qfffreippn ealepqkpaw icqryknqyy
       61 fatlydrkmr ipvysayiyq pgpgkrpktw lvepqligpt ypktmekewt llnhynvtle
      121 klsqsqailh dyknltglnr ghlnpnghhd dyssrmatft ltnivpqdek lnggawnnye
      181 qqtmirrtqg ctttyvvvga vpgnnyiakg rvnkpshlws aaccvvdnny ikawaviaen
      241 dknevelltl geledtltel ygrgqvslfd sdcpre
//
LOCUS       XP_041333280             276 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333280
VERSION     XP_041333280.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477346.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=31468
     Region          58..267
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
     Site            order(139..140,142,172,180,184)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(139..140,184)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            172
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..276
                     /gene="LOC121358840"
                     /coded_by="XM_041477346.1:281..1111"
                     /db_xref="GeneID:121358840"
ORIGIN      
        1 mlgllllqvl asclwlghse vvksfetscp qfffreippn ealepqkpaw icqryknqyy
       61 fatlydrkmr ipvysayiyq pgpgkrpktw lvepqligpt ypktmekewt llnhynvtle
      121 klsqsqailh dyknltglnr ghlnpnghhd dyssrmatft ltnivpqdek lnggawnnye
      181 qqtmirrtqg ctttyvvvga vpgnnyiakg rvnkpshlws aaccvvdnny ikawaviaen
      241 dknevelltl geledtltel ygrgqvslfd sdcpre
//
LOCUS       XP_041333290             276 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333290
VERSION     XP_041333290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477356.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=31468
     Region          58..267
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
     Site            order(139..140,142,172,180,184)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(139..140,184)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            172
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..276
                     /gene="LOC121358840"
                     /coded_by="XM_041477356.1:290..1120"
                     /db_xref="GeneID:121358840"
ORIGIN      
        1 mlgllllqvl asclwlghse vvksfetscp qfffreippn ealepqkpaw icqryknqyy
       61 fatlydrkmr ipvysayiyq pgpgkrpktw lvepqligpt ypktmekewt llnhynvtle
      121 klsqsqailh dyknltglnr ghlnpnghhd dyssrmatft ltnivpqdek lnggawnnye
      181 qqtmirrtqg ctttyvvvga vpgnnyiakg rvnkpshlws aaccvvdnny ikawaviaen
      241 dknevelltl geledtltel ygrgqvslfd sdcpre
//
LOCUS       XP_041333300             276 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333300
VERSION     XP_041333300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=31468
     Region          58..267
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
     Site            order(139..140,142,172,180,184)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(139..140,184)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            172
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..276
                     /gene="LOC121358840"
                     /coded_by="XM_041477366.1:290..1120"
                     /db_xref="GeneID:121358840"
ORIGIN      
        1 mlgllllqvl asclwlghse vvksfetscp qfffreippn ealepqkpaw icqryknqyy
       61 fatlydrkmr ipvysayiyq pgpgkrpktw lvepqligpt ypktmekewt llnhynvtle
      121 klsqsqailh dyknltglnr ghlnpnghhd dyssrmatft ltnivpqdek lnggawnnye
      181 qqtmirrtqg ctttyvvvga vpgnnyiakg rvnkpshlws aaccvvdnny ikawaviaen
      241 dknevelltl geledtltel ygrgqvslfd sdcpre
//
LOCUS       XP_041333310             276 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333310
VERSION     XP_041333310.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477376.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=31468
     Region          58..267
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
     Site            order(139..140,142,172,180,184)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(139..140,184)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            172
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..276
                     /gene="LOC121358840"
                     /coded_by="XM_041477376.1:1304..2134"
                     /db_xref="GeneID:121358840"
ORIGIN      
        1 mlgllllqvl asclwlghse vvksfetscp qfffreippn ealepqkpaw icqryknqyy
       61 fatlydrkmr ipvysayiyq pgpgkrpktw lvepqligpt ypktmekewt llnhynvtle
      121 klsqsqailh dyknltglnr ghlnpnghhd dyssrmatft ltnivpqdek lnggawnnye
      181 qqtmirrtqg ctttyvvvga vpgnnyiakg rvnkpshlws aaccvvdnny ikawaviaen
      241 dknevelltl geledtltel ygrgqvslfd sdcpre
//
LOCUS       XP_041333321             276 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333321
VERSION     XP_041333321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477387.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=31468
     Region          58..267
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; prokaryotic and
                     eukaryotic double- and single-stranded DNA and RNA
                     endonucleases also present in phosphodiesterases. They
                     exists as monomers and homodimers; cl00089"
                     /db_xref="CDD:469610"
     Site            order(139..140,142,172,180,184)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(139..140,184)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            172
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..276
                     /gene="LOC121358840"
                     /coded_by="XM_041477387.1:311..1141"
                     /db_xref="GeneID:121358840"
ORIGIN      
        1 mlgllllqvl asclwlghse vvksfetscp qfffreippn ealepqkpaw icqryknqyy
       61 fatlydrkmr ipvysayiyq pgpgkrpktw lvepqligpt ypktmekewt llnhynvtle
      121 klsqsqailh dyknltglnr ghlnpnghhd dyssrmatft ltnivpqdek lnggawnnye
      181 qqtmirrtqg ctttyvvvga vpgnnyiakg rvnkpshlws aaccvvdnny ikawaviaen
      241 dknevelltl geledtltel ygrgqvslfd sdcpre
//
LOCUS       XP_041333346             273 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease domain-containing 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333346
VERSION     XP_041333346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477412.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="endonuclease domain-containing 1 protein-like"
                     /calculated_mol_wt=30517
     Region          58..238
                     /region_name="Endonuclease_NS"
                     /note="DNA/RNA non-specific endonuclease; smart00892"
                     /db_xref="CDD:214889"
     Site            order(138..139,141,171,179,183)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(138..139,183)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     Site            171
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238043"
     CDS             1..273
                     /gene="LOC121358866"
                     /coded_by="XM_041477412.1:132..953"
                     /db_xref="GeneID:121358866"
ORIGIN      
        1 mlgllllqvl asclwlghse vvtpfagcpq ffyagippnd alnpknpawi cqrfrnsyhy
       61 atlydrdlhi pvysayiyqp glgkrpqtwl vepqlinpty skdmdtetsi cnrykitpqq
      121 igqsqaitqd yknlqgldrg hlspsghqsg nnskwatftl tnivpqnstl nkgqwkdyen
      181 qtmaqrtqgc tttyvitgav pgntyisnrr vnvpshiwsa accqtnttmt twaviaensr
      241 nqvqnltraq leaklsqlyg rgqvslfhsa cpp
//
LOCUS       XP_041333360             234 aa            linear   VRT 06-MAY-2021
DEFINITION  MICOS complex subunit MIC19 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333360
VERSION     XP_041333360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="MICOS complex subunit MIC19 isoform X1"
                     /calculated_mol_wt=27154
     Region          29..180
                     /region_name="MIC19_MIC25"
                     /note="MICOS complex subunit MIC19/MIC25; pfam05300"
                     /db_xref="CDD:461615"
     CDS             1..234
                     /gene="CHCHD3"
                     /coded_by="XM_041477426.1:117..821"
                     /db_xref="GeneID:121358872"
ORIGIN      
        1 mggggstrrv tfeadeneni tvvkgvrlsd svidrmkeps sprgrqhrgs gavsdeelkk
       61 riaeelaler arrdseaqkr rlkqeqmyvr defgkllere rissnehltr ailreraate
      121 eerqkaqrfa rqleekdrel kkhdayykeq larleersaq fykvtteqyq kaadevsarf
      181 kryeshpicg elqekilqcy rehaqetlsc salasqylhc vnhakqqrml grgg
//
LOCUS       XP_041333369             232 aa            linear   VRT 06-MAY-2021
DEFINITION  MICOS complex subunit MIC19 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333369
VERSION     XP_041333369.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477435.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..232
                     /product="MICOS complex subunit MIC19 isoform X2"
                     /calculated_mol_wt=27025
     Region          29..178
                     /region_name="MIC19_MIC25"
                     /note="MICOS complex subunit MIC19/MIC25; pfam05300"
                     /db_xref="CDD:461615"
     CDS             1..232
                     /gene="CHCHD3"
                     /coded_by="XM_041477435.1:117..815"
                     /db_xref="GeneID:121358872"
ORIGIN      
        1 mggggstrrv tfeadeneni tvvkgvrlsd svidrmkeps sprgrqhrgs vsdeelkkri
       61 aeelalerar rdseaqkrrl kqeqmyvrde fgkllereri ssnehltrai lreraateee
      121 rqkaqrfarq leekdrelkk hdayykeqla rleersaqfy kvtteqyqka adevsarfkr
      181 yeshpicgel qekilqcyre haqetlscsa lasqylhcvn hakqqrmlgr gg
//
LOCUS       XP_041333382             284 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041333382
VERSION     XP_041333382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477448.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=29690
     CDS             1..284
                     /gene="LOC121358882"
                     /coded_by="XM_041477448.1:1..855"
                     /db_xref="GeneID:121358882"
ORIGIN      
        1 maeppspphr srhpelrhsa argcqvfsph ptslsapaap paarregaht pgaprgtpri
       61 prahtprnps ahtprphpap papvppvtyl rhrlasfsss fssspgegaa rspisgadta
      121 lparrdrcsr ggrvgghrhl pdaspgspta slrpsprccf viscpscdtr rplygnlkgt
      181 ftsaaagpag tpgglrapav lacppsgtsl pspggcapcs yrpllkakrn nrgitgragt
      241 mrkdgprswr lrdpvlvygr ggspvleeae kqqqqqnpkq pkek
//
LOCUS       XP_041333394             551 aa            linear   VRT 06-MAY-2021
DEFINITION  podocalyxin [Pyrgilauda ruficollis].
ACCESSION   XP_041333394
VERSION     XP_041333394.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477460.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="podocalyxin"
                     /calculated_mol_wt=57023
     Region          93..>318
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          334..551
                     /region_name="CD34_antigen"
                     /note="CD34/Podocalyxin family; pfam06365"
                     /db_xref="CDD:461884"
     CDS             1..551
                     /gene="PODXL"
                     /coded_by="XM_041477460.1:133..1788"
                     /db_xref="GeneID:121358890"
ORIGIN      
        1 mraagllpll lllgvssqdd tdpgkasttt ttnipttpks anaretsptr papppatlqa
       61 ttttaqptvv atnpaqsiii ttkpgtspsp ttpspttaag aspttvrgtl patttpshis
      121 gqdssshstt nskttaaasp ttlqqpgtta ssgssgttaa aksiltdaas ppgavgavgt
      181 sspttasqgk qpldhlhktt vstavprtdp sqsskecvvp dphcptkqpp psssspaqgp
      241 ipstssgstk tfvtpptgss slpstptpqp gskgtipeaa trtapgadqs tqdagsasak
      301 ptsasqspas aqppapgdqt dqaegctsgh pqpnisssne dewttasknn sffesfcsta
      361 qhvfdasrdn ckvmltacks psshwavrvv lhlpldseev lgklkekkdm leelgivnit
      421 sdkmvedmti ndefstplii tiitlagsll lvatiygchq rfsqkkdqni hpdvpgfddg
      481 hvalifnqrl teemqtmeng yhdnptlevm etssemqekk vnlngelgds wivpldtlmk
      541 edleeeedth l
//
LOCUS       XP_041333406            1851 aa            linear   VRT 06-MAY-2021
DEFINITION  plexin-A4 [Pyrgilauda ruficollis].
ACCESSION   XP_041333406
VERSION     XP_041333406.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477472.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1851
                     /product="plexin-A4"
                     /calculated_mol_wt=207929
     Region          36..467
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          466..504
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          520..610
                     /region_name="TIG_plexin"
                     /note="TIG domain; pfam17960"
                     /db_xref="CDD:465588"
     Region          611..658
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          664..758
                     /region_name="TIG_2"
                     /note="TIG domain found in plexin; pfam18020"
                     /db_xref="CDD:465619"
     Region          760..812
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          814..909
                     /region_name="IPT_plexin_repeat1"
                     /note="First repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01180"
                     /db_xref="CDD:238585"
     Region          911..995
                     /region_name="IPT_plexin_repeat2"
                     /note="Second repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01179"
                     /db_xref="CDD:238584"
     Region          997..1097
                     /region_name="IPT_plexin_repeat3"
                     /note="Third repeat of the IPT domain of Plexins and Cell
                     Surface Receptors (PCSR) . Plexins are involved in the
                     regulation of cell proliferation and of cellular adhesion
                     and repulsion receptors. In general, there are three
                     copies of the IPT domain present...; cd01181"
                     /db_xref="CDD:238586"
     Region          1099..1183
                     /region_name="TIG"
                     /note="IPT/TIG domain; pfam01833"
                     /db_xref="CDD:460355"
     Region          1268..1816
                     /region_name="Plexin_cytopl"
                     /note="Plexin cytoplasmic RasGAP domain; pfam08337"
                     /db_xref="CDD:462434"
     CDS             1..1851
                     /gene="PLXNA4"
                     /coded_by="XM_041477472.1:246..5801"
                     /db_xref="GeneID:121358899"
ORIGIN      
        1 mspamwkwtc lvshlllstt vsplgrqqpp hpkrpfitft geqaegnfnh lvvdertghi
       61 ylgavnriyk lssdlkvlvt hetgpdddnp kcypprivqt cnepltptnn inkmllidyk
      121 enrliacgsl yqgickllrl ddlfklgepf hkkehylsgv nesgsvfgvi vsysnmddkl
      181 fiatavdgkp eyfptissrk ltknseadgm fayvfhdefv asmikipsdt ftiipdfdiy
      241 yiygfssgnf vyfltlqpem isppgsttke qvytsklvrl ckedtafnsy vevpigcekn
      301 gveyrllqaa ylskagaila rslgvgpedd ilftvfskgq krkmksldes alcifvlkni
      361 ndrikdrlqs cyrgegtldl awlkvkdipc ssanvyknhs lafvgtksgk lkkirvdgta
      421 kntleyeivq vvdtgpilrd mafsmdhehl yimsekqltr vpvescsqye tcseclgsgd
      481 phcgwcvlhn tctrkercer sseprrfase mkqcvrltvh pnnisvsqyn vllvletynv
      541 pelsagvnct fedlsemdgl vvgsqiqcis paakevpqii tengdhhivq lqlksketgm
      601 tfastsfvfy ncsvhnscls cvespyrchw ckyrhvcthd psscsfqegr vkmpedcpql
      661 lqaekilvpv evikpitlka knlpqpqsgq rgyecilniq gseqrvpalr fnsssvqcqn
      721 tsysyegmei nslpveltvv wngnfnidnp aqnkvhlykc gamrdscglc lkadpdfecg
      781 wcqgqnqctl kqhcpaqdsq wlelsstkgk ctnpkitdin pvtgpreggt rvtirgenlg
      841 lefqdiashv kvagveckpl vegyipaeqi vcemgeakps qhagfveicv aeckpefmar
      901 ssqlyyfmtl tlsdlkpkrg pvsggtqvti tgnnlnagsn vivtfgrqpc lfyrrstkhi
      961 vcnttasyeg fekvkvsvrv dkakihqelh yeyvedptil riepewsifs gntpiavwgt
     1021 hldliqnpqi rakhggkehv nncevqnste mtcqapalav dpnhqselae rpeefgfild
     1081 nvqsllilnk tnftyypnpi fevfnpsgil elkpgspiil kgrnlippva ggnarlnytv
     1141 lvgekpcavt vsdvqllces pnligrhkvm arvggmefsp gmvyispdsp lslpaivsia
     1201 vagglliifi vavliaykrk sresdltlkr lqmqmdnles rvaleckeaf aelqtdihel
     1261 tsdldgagip fldyrtytmr vlfpgiedhp vlrdlevpgy rqervekglk lfaqlinnkv
     1321 fllsfirtle sqrsfsmrdr gnvaslimtv lqskleyatd vlkqlladli dknlesknhp
     1381 klllrrtesv aekmltnwft fllykflkec ageplfslfc aikqqmekgp idsitgeary
     1441 slsedklirq qidyktlvls cvnpdnvnsp eipvkilncd titqvkekil daifknvpcs
     1501 hrpkaadmdl ewrqasgarm ilqdedittk iendwkrlnt lahyqvpdgs vvalvskqvt
     1561 aynavnnstv srtsaskyen mirytgspds lrsrapmitp dlesgvkmwh lvknhehgdq
     1621 kegdrgskmv seiyltrlla tkgtlqkfvd dlfetifsta hrgsalplai kymfdfldeq
     1681 adkhnihdph vrhtwksncl plrfwvnmik npqfvfdihk nsitdaclsv vaqtfmdscs
     1741 tsehrlgkds psnkllyakd ipsyknwver yysdiakmpa isdqdmnayl aeqsrmhmne
     1801 fntmsalsei ysyvgkysee ilgaldqddq agkqklaykl eqvitlmsid s
//
LOCUS       XP_041333419             495 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041333419
VERSION     XP_041333419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477485.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="exocyst complex component 4"
                     /calculated_mol_wt=56161
     Region          <57..143
                     /region_name="Sec8_exocyst"
                     /note="Sec8 exocyst complex component specific domain;
                     pfam04048"
                     /db_xref="CDD:367782"
     CDS             1..495
                     /gene="EXOC4"
                     /coded_by="XM_041477485.1:5..1492"
                     /db_xref="GeneID:121358908"
ORIGIN      
        1 maagdavgry rstvgrskdp sgllisvirt lstsddvedr enekgrleea yekcdrdlde
       61 livqhytelt tairtyqsit eritnsrnki kqvkenllsc kmllhckrde lrklwiegie
      121 hkhvlnllde ienikqvpqk leqcmaskry lnatdmlvsa vdslegpllq veglsdlrle
      181 lhskkmnlhl vlidelhrhl yirstnrvgq rgrdrarlgs lvkdsspvpl mdvtnlstpr
      241 kfletsqfst pgsssmrdss lleikedtel dpeensavfm gilikglakl kkipetvkai
      301 qdrleqelkq ivkrsttqva dngyqrgeni sqenqprlll ellellfdkf navaaahavv
      361 lghlqqtvas pcsqhdgdik lydmvdvwvk iqdvlqmllt eyldmkntrt asepsaqlsy
      421 assgrefaaf fakkkpqrpk nplfkfesss haismsaylr eqrrelysrs gelqefkvec
      481 eqdkavneha gaevn
//
LOCUS       XP_041333429             472 aa            linear   VRT 06-MAY-2021
DEFINITION  exocyst complex component 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041333429
VERSION     XP_041333429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477495.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="exocyst complex component 4"
                     /calculated_mol_wt=53527
     CDS             1..472
                     /gene="LOC121358917"
                     /coded_by="XM_041477495.1:1..1419"
                     /db_xref="GeneID:121358917"
ORIGIN      
        1 mtrfiqeiel amelgpakqc plrefltmyi kniflsqvla einkeiegvt kasdplkila
       61 nadtmkilgv qrpllqstvi vektvqdlme lmhdlsaysd qflnmvcvkl qeykdtcsla
      121 yrsivqsdek lvisaswakd ddisrllksl pnwsnmaqpk qlrpkreeee dfiraafgke
      181 sevlignlgd klipqqeilr dvsdlkalan lheslewlag rtkaafssls aaqttspgqd
      241 shasleqlpa seqilqslse larsfqemad rcllvlhlev rvhcfhylip lakqgnyaiv
      301 anvesmdydp lvvrlnkdis aieeamsasl qqhkfqyife glghliscil ingahyfrri
      361 sesgikkmcr nifilqqnlt nitmsreadl dfarqyyeml yntadellnl vvdqgvkyte
      421 leyiyalnll hrsqtgvgdq ttqnmrlqrl keiiceqaai kqatkdkkit tv
//
LOCUS       XP_041333442             608 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat and guanylate kinase domain-containing protein,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041333442
VERSION     XP_041333442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477508.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>608
                     /product="leucine-rich repeat and guanylate kinase
                     domain-containing protein"
     Region          <75..>255
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          88..109
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          110..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          132..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          176..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..218
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          353..475
                     /region_name="GMPK"
                     /note="Guanosine monophosphate kinase (GMPK, EC 2.7.4.8),
                     also known as guanylate kinase (GKase), catalyzes the
                     reversible phosphoryl transfer from adenosine triphosphate
                     (ATP) to guanosine monophosphate (GMP) to yield adenosine
                     diphosphate (ADP) and guanosine...; cd00071"
                     /db_xref="CDD:238026"
     Site            order(358,364,381,388,391,400,423,428)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238026"
     Site            order(358,364)
                     /site_type="other"
                     /note="G-X2-G-X-G-K"
                     /db_xref="CDD:238026"
     CDS             1..608
                     /gene="LRGUK"
                     /coded_by="XM_041477508.1:1..>1824"
                     /db_xref="GeneID:121358925"
ORIGIN      
        1 maggeengre gslgepppss deppqplaeg lpeeqprpgp phgedereee esersevqpr
       61 vpqlsgegsl fqgrdlsdis ilsgyihlqk melssnkind lscvshmpyl velnasknql
      121 ttyfdfkapk nlrevdfshn qipkmkdlsa yhsltkllld fneieeirgl eechsltqlg
      181 lshnrlaair glqnlpiril nlsfnqiekv nglktlknlq wvdlsnnkin nlqgleehdl
      241 leminlednq vaelselkwi edlpllrvln llknplqekd gywlsaifml lqvtdldlkk
      301 vsveekvaav nkedpppevv aaedhriqil ynaqqpqevl pstlpdseqp ypmlvllgpv
      361 aggrrqlslk icrkfknffr fgpchttrea yfgeenrfdy yfisqeefdt mvkagqflat
      421 ykysghcygl grdtvesiar eglgtcvhme iegahslknt hfrpryvllv pkdkwkygvh
      481 lrrtglfsrp eieeavsrvd mylqvsqdvp syfhavintd eldeaftelt hlvkvylgle
      541 ppdisdsfqg frsragsrqq rfpeeksspg rgtathswtp sygdrserst ktyprdilem
      601 ltappgsv
//
LOCUS       XP_041333455             734 aa            linear   VRT 06-MAY-2021
DEFINITION  muskelin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333455
VERSION     XP_041333455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..734
                     /product="muskelin isoform X1"
                     /calculated_mol_wt=84458
     Region          11..206
                     /region_name="Muskelin_N"
                     /note="Muskelin N-terminus; pfam06588"
                     /db_xref="CDD:284099"
     Region          270..321
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          283..558
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          325..383
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          455..511
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..734
                     /gene="MKLN1"
                     /coded_by="XM_041477521.1:31..2235"
                     /db_xref="GeneID:121358932"
ORIGIN      
        1 maaaagpaga esrvlgyslh rwssfsstyl penilvdrpn dqssrwsses nyppqylilk
       61 lerpaivqsi tfgkyekthv cnlkkfkvfg gmneenmtdl lssglkndyn ketftlkhki
      121 deqmfpcrfi kivpllswgp sfnfsiwyve lngiddpdvv qpclnwysky reqeairlcl
      181 khfrqhnyte afeslqkktk ialehpmltd lhdklvlkgd fdaceeliek avndglfnqy
      241 isqqeykprw gqiipkstkg dgedsrpgmr gghqmvidvq tetvylfggw dgtqdladfw
      301 aysvkenqwt cisrdtekes gpsarschkm cidiqrrqiy tlgryldssv rnskslksdf
      361 yrydidtntw mllsedtaad ggpklvfdhq mcmdsekhmi ytfggriltc ngsvddsras
      421 epqfsglfaf dcqcqtwkll redscnagpe diqsrighcm lfhsknrcly vfggqrskty
      481 lndffsydvd sdhvdiisdg tkkdsgmvpm tgftqratid pelneihvls glskdkekre
      541 envrnsfwiy divrnswscv ykndqaaken pgkslqeeep cprfahqlvy delhkvhylf
      601 ggnpgkscsp kmrlddfwsl klcrpskeyl lrhckylirk hrfeekaqtd plsalkylqn
      661 dlyvtvdhsd peetkefqll asalfksgsd fttlgfsdvd htyaqrtqlf dtlvnffpdn
      721 mtppkgnlvd litl
//
LOCUS       XP_041333462             528 aa            linear   VRT 06-MAY-2021
DEFINITION  muskelin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333462
VERSION     XP_041333462.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477528.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..528
                     /product="muskelin isoform X2"
                     /calculated_mol_wt=60554
     Region          64..115
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          77..352
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          119..177
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          249..305
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..528
                     /gene="MKLN1"
                     /coded_by="XM_041477528.1:361..1947"
                     /db_xref="GeneID:121358932"
ORIGIN      
        1 mltdlhdklv lkgdfdacee liekavndgl fnqyisqqey kprwgqiipk stkgdgedsr
       61 pgmrgghqmv idvqtetvyl fggwdgtqdl adfwaysvke nqwtcisrdt ekesgpsars
      121 chkmcidiqr rqiytlgryl dssvrnsksl ksdfyrydid tntwmllsed taadggpklv
      181 fdhqmcmdse khmiytfggr iltcngsvdd srasepqfsg lfafdcqcqt wkllredscn
      241 agpediqsri ghcmlfhskn rclyvfggqr sktylndffs ydvdsdhvdi isdgtkkdsg
      301 mvpmtgftqr atidpelnei hvlsglskdk ekreenvrns fwiydivrns wscvykndqa
      361 akenpgkslq eeepcprfah qlvydelhkv hylfggnpgk scspkmrldd fwslklcrps
      421 keyllrhcky lirkhrfeek aqtdplsalk ylqndlyvtv dhsdpeetke fqllasalfk
      481 sgsdfttlgf sdvdhtyaqr tqlfdtlvnf fpdnmtppkg nlvdlitl
//
LOCUS       XP_041333470             528 aa            linear   VRT 06-MAY-2021
DEFINITION  muskelin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333470
VERSION     XP_041333470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509322.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..528
                     /product="muskelin isoform X2"
                     /calculated_mol_wt=60554
     Region          64..115
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          77..352
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          119..177
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          249..305
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..528
                     /gene="MKLN1"
                     /coded_by="XM_041477536.1:364..1950"
                     /db_xref="GeneID:121358932"
ORIGIN      
        1 mltdlhdklv lkgdfdacee liekavndgl fnqyisqqey kprwgqiipk stkgdgedsr
       61 pgmrgghqmv idvqtetvyl fggwdgtqdl adfwaysvke nqwtcisrdt ekesgpsars
      121 chkmcidiqr rqiytlgryl dssvrnsksl ksdfyrydid tntwmllsed taadggpklv
      181 fdhqmcmdse khmiytfggr iltcngsvdd srasepqfsg lfafdcqcqt wkllredscn
      241 agpediqsri ghcmlfhskn rclyvfggqr sktylndffs ydvdsdhvdi isdgtkkdsg
      301 mvpmtgftqr atidpelnei hvlsglskdk ekreenvrns fwiydivrns wscvykndqa
      361 akenpgkslq eeepcprfah qlvydelhkv hylfggnpgk scspkmrldd fwslklcrps
      421 keyllrhcky lirkhrfeek aqtdplsalk ylqndlyvtv dhsdpeetke fqllasalfk
      481 sgsdfttlgf sdvdhtyaqr tqlfdtlvnf fpdnmtppkg nlvdlitl
//
LOCUS       XP_041333507             145 aa            linear   VRT 06-MAY-2021
DEFINITION  armadillo repeat-containing protein 5, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333507
VERSION     XP_041333507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477573.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>145
                     /product="armadillo repeat-containing protein 5"
     CDS             1..145
                     /gene="ARMC5"
                     /coded_by="XM_041477573.1:74..>509"
                     /db_xref="GeneID:121358970"
ORIGIN      
        1 mseslgwcve avraaaepsl srallalrar htrraggpar frergglgpl lelvgperpr
       61 rvlelalsvl gncctepgcr rqarslggvp rlvallalpa vpesarnrva rtlanlalep
      121 dgaravldag errfgdnpgk fgkfr
//
LOCUS       XP_041333530             215 aa            linear   VRT 06-MAY-2021
DEFINITION  hsp90 co-chaperone Cdc37-like [Pyrgilauda ruficollis].
ACCESSION   XP_041333530
VERSION     XP_041333530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509378.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="hsp90 co-chaperone Cdc37-like"
                     /calculated_mol_wt=24854
     Region          1..129
                     /region_name="CDC37_N"
                     /note="Cdc37 N terminal kinase binding; smart01071"
                     /db_xref="CDD:198139"
     CDS             1..215
                     /gene="LOC121358981"
                     /coded_by="XM_041477596.1:60..707"
                     /db_xref="GeneID:121358981"
ORIGIN      
        1 mvdysvwdhi evsddedeth pnidtaslfr wrhqarverm eqfqkekeel dkgcreckrr
       61 laecqkrmke lelaepqsgk geleklqaea qqlrneeksw eskleelrkk eknmpwnvdt
      121 lskdgfsksv fnvkpeekee teeqkekkhk tfveryekqi khfgeglgas gssflgfsep
      181 gsppcagssp esshfagksr ifcgfpiffp ccsrv
//
LOCUS       XP_041333539             113 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333539
VERSION     XP_041333539.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477605.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509386.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..113
                     /product="polyhomeotic-like protein 2 isoform X1"
                     /calculated_mol_wt=12163
     CDS             1..113
                     /gene="LOC121358989"
                     /coded_by="XM_041477605.1:84..425"
                     /db_xref="GeneID:121358989"
ORIGIN      
        1 mgpaspvptg rtargtgaar cvaqvgrssl lvgalhkqya qellpdklpa qdnttttdsd
       61 meepylqgvp prppeskeeg nppklkcelc grvdfaykfk rskrfcsmac akr
//
LOCUS       XP_041333548             106 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333548
VERSION     XP_041333548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509386.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..106
                     /product="polyhomeotic-like protein 2 isoform X2"
                     /calculated_mol_wt=11462
     CDS             1..106
                     /gene="LOC121358989"
                     /coded_by="XM_041477614.1:84..404"
                     /db_xref="GeneID:121358989"
ORIGIN      
        1 mgpaspvptg rtargtgaar cvaqvgrssl lvgalhkqya qellpdklpa qdnttttdsd
       61 meepylqesk eegnppklkc elcgrvdfay kfkrskrfcs macakr
//
LOCUS       XP_041333562             303 aa            linear   VRT 06-MAY-2021
DEFINITION  protein-tyrosine kinase 2-beta-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333562
VERSION     XP_041333562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477628.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509389.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>303
                     /product="protein-tyrosine kinase 2-beta-like"
     Region          <1..210
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..303
                     /gene="LOC121358999"
                     /coded_by="XM_041477628.1:19..>927"
                     /db_xref="GeneID:121358999"
ORIGIN      
        1 mkkldhphiv kligiaeeep twiimelypy gelgqyleqn rlglavptlv lyalqvskal
       61 ayleaincvh rdiavrnilv aspecvklgd fglsryiede eyykasvtrl pikwmspesi
      121 nfrrfttasd vwmfavcmwe ilsygkqpff wlenkdvigv lekgdrlpkp dlcppmlytl
      181 mtrcwdydpg erpkfqelvc slsdiylmek elakeqernn rhrppkilep pafqepppkp
      241 srpmykppsq nnllapklqf qvpeglcass ptlaspaeyq tpansrrtpp psrhsvfkrh
      301 smr
//
LOCUS       XP_041333574             433 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121359006, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333574
VERSION     XP_041333574.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477640.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509400.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..433
                     /product="uncharacterized protein LOC121359006"
     CDS             1..433
                     /gene="LOC121359006"
                     /coded_by="XM_041477640.1:<1..1303"
                     /codon_start=2
                     /db_xref="GeneID:121359006"
ORIGIN      
        1 rltssaaawt wlligsllva shpwlrppwg salralarla vglalsragh alghaleaat
       61 gsctsptplg tllvplgdpa acrgaghswe gfspapqafa lvhcglglae eaaalgrsly
      121 gskmaagpkm aagykmaaes kmaawykmap whkmapgskm aagydvsees kmaagskmaa
      181 ghdaseeckm aapskmaary kmeegskmaa gsgwawprpt wrpgsppppr pigfewaepp
      241 patygwagpp hygwggaggh lgwpfwgggg hfegrsvghf egghfdsgrh fdsgrhfdsg
      301 rhfdsgghfd sgghfdrpar hfdppgghfd ppgghfdpag rhfpgaspls egghlagghl
      361 ggrlvappta lsilyllava llvtwhlllv vtltyrhtwa rnaagaalgw aawaltyrgw
      421 yrwawspgpp gwg
//
LOCUS       XP_041333586             303 aa            linear   VRT 06-MAY-2021
DEFINITION  mas-related G-protein coupled receptor member H-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333586
VERSION     XP_041333586.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477652.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509422.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="mas-related G-protein coupled receptor member
                     H-like"
                     /calculated_mol_wt=34107
     Region          29..289
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          29..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          60..77
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          97..117
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          143..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          180..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          217..238
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          243..268
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..303
                     /gene="LOC121359011"
                     /coded_by="XM_041477652.1:17..928"
                     /db_xref="GeneID:121359011"
ORIGIN      
        1 mevttvfpsp tsltegddlc etdvtsvamh svtlliclsg lagngavigl ltlksrnsgi
       61 fdlavvdflf llftipsall flvedvscsp ivpllylrfl fqlsvvsyyw allwlmpsrp
      121 vvymyklwkl cchcdvplrl rwlvgsvqyw aflavftvip tvtflcplke qehcqtalis
      181 mytimlllfv apvvisgtid fikakrgsqq qqpkrrdmvi flialftlll siwnflqqls
      241 yiavssqvvf lvtcihnssk pfiyflagrc tkpcsmgslr lslqrvfeep kektthrnya
      301 amv
//
LOCUS       XP_041333597             361 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: mas-related G-protein coupled receptor member
            H-like [Pyrgilauda ruficollis].
ACCESSION   XP_041333597
VERSION     XP_041333597.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477663.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509422.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 13% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="LOW QUALITY PROTEIN: mas-related G-protein
                     coupled receptor member H-like"
                     /calculated_mol_wt=38836
     Region          29..297
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          29..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          64..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          151..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          225..243
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          253..276
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..361
                     /gene="LOC121359021"
                     /coded_by="XM_041477663.1:276..1361"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons"
                     /db_xref="GeneID:121359021"
ORIGIN      
        1 mevttvsspa isstegddlc etdvtsvamh svtlliclsg lagngavixv lgfctqrdtm
       61 kpitayildl aiinflflil mvpstllfll edlscsails paytsflfll fvmfysvgly
      121 rltaisverc rsmlcprglf chlpqdrswv vvsaglwals itviaaisaa tslcksqehk
      181 xlggalisly ilsflvfaps vvisstilfi hfkgssqqqr sknldiivfl avlltlplsl
      241 wnflqqlgyt avspqvvllf acmhssinpf iyfsvtkcwr rcsmeslrec lqevseepee
      301 stvpsndttr dialapatfi ilcspeehtg aglsssllgp rniwpggagt llgslvkpgk
      361 e
//
LOCUS       XP_041333610             783 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein LOC121359029
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333610
VERSION     XP_041333610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477676.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509433.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 33% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..783
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     LOC121359029"
                     /calculated_mol_wt=87533
     Region          <138..>387
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          663..758
                     /region_name="Mab-21_C"
                     /note="Mab-21 protein HhH/H2TH-like domain; pfam20266"
                     /db_xref="CDD:466416"
     CDS             1..783
                     /gene="LOC121359029"
                     /coded_by="XM_041477676.1:1..2352"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121359029"
ORIGIN      
        1 mallpflfvl vqsliqypqp agdgldeath rrmqerqell dhemarllqe lergppdkgw
       61 gamlfgalqq wpfwvlagll lllglwfscr rrsceassss sedqsfcnts gddeweteee
      121 evcvdseedg ensdvtvead dsgsgndgeg spvtadegdn ddaiegsddv kvkedrdvns
      181 dnghdltkde gwsdgnvpgd ntaegdeeep gnvagkaedl deadegenkd vqveqdkdag
      241 qeeegdgsee ntngtnlkvg nnddvneged ningqeeymd vkvqessdas elrsrdctgq
      301 edssergnea ahgalaktee enkevtedgn drnkdeeqgd vnveenkked rkedkqgnva
      361 asenedsdgd keenssggie dgedtedign egaillvdrv ewpvedlerg csvtaelmes
      421 ftrvfvdsvs nsfypvpqea igvgsafegw sprewdgvyr vlvplnpppg hafhlelnsa
      481 gqmaartfsv rvelvctckr eqlgekllcf vhdsqeelwr khkrslletl ctgsyldvek
      541 tshwfhqlvr cswlhvpqhv phsyswhlvf qscsrscqfq lskgkkslmv emlfgvrqgd
      601 sdifvvsqpt eaqkggsinf vssqpakani iastawpety avaeakffqh iarklpcqsl
      661 hlkclqvftc ilrgtgfsss twktvvmhvl ttvpvsqwrr referrlwdv maylhrclql
      721 krlehfvqgn erlpaeislp pamrgvepln lfehlardpa threamqayg qlryrlwmml
      781 ssh
//
LOCUS       XP_041333625             775 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3E [Pyrgilauda ruficollis].
ACCESSION   XP_041333625
VERSION     XP_041333625.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477691.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509433.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..775
                     /product="semaphorin-3E"
                     /calculated_mol_wt=89578
     Region          49..519
                     /region_name="Sema_3E"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 3E (Sema3E); cd11253"
                     /db_xref="CDD:200514"
     Site            order(106..109,167..168,172,193,195..196,203,213,216..217,
                     219,224,253,277..281,283,399,403,406)
                     /site_type="other"
                     /note="putative plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200514"
     Site            order(254..255,257,260..262,296,299..300,302,304,308,
                     331..338,364..367,412,427)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200514"
     Region          518..566
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          584..675
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          584..590
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409455"
     Region          595..603
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(597,642)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          609..615
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          617..620
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          630..634
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          637..644
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          650..659
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          662..675
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..775
                     /gene="SEMA3E"
                     /coded_by="XM_041477691.1:168..2495"
                     /db_xref="GeneID:121359034"
ORIGIN      
        1 masaqdllil alyglllelp agchaadtrq prlrlshkel wdlnrtsvfr spfgylglhv
       61 mlldeyqerl fvggrdllys lsldrisdny reihwpstpl qaeeciikgr dadecanyir
      121 vlhrynrthl lacgtgafdp lctfvraghp sedhlfqles hkfergrgrc pfdpsssfts
      181 iliggelftg lysdywgrda avfrsmnrva hlrtepdner llkepkfvgs ymipdnedhd
      241 dnkvyfffte kaleaetsth aiytrvgrvc andmggqrml vnkwttflkt rlvcsvpgrn
      301 gidthfdele dvfllqtrdn knpvifglfn ttsnifrgya icvyhmasvr aafngpyahk
      361 egpeyhwaly erkvpyprpg scaskvnggl ytttkdypde avhfarshpl myqpirpvhk
      421 rpilvktdgk ynlkqiavdr veaedgqydv lfigtdngiv lkvitiynqe tesmeevile
      481 elqvfkmpvp iismeisskr qqlyvgseav iaqvkfhqcd mygtacadcc lardpycawd
      541 giscsryypt avqakrrfrr qdvrhgnaaq qcfgqqfige vlekteerfv ygieynstll
      601 ectprtlqak viwfvqrahe tkkeevktdd riikmdlgll flklhrldag tyfcqtvehs
      661 ivhtvrkitl eiveeervde mfnkdyeeei phkmpcpmqs sipqaskpwy keflqligys
      721 nfqrveeyce kvwctdkkrk klkmspskwk yaspqekkar irpehyrlpr niads
//
LOCUS       XP_041333638            5230 aa            linear   VRT 06-MAY-2021
DEFINITION  protein piccolo [Pyrgilauda ruficollis].
ACCESSION   XP_041333638
VERSION     XP_041333638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477704.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509433.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..5230
                     /product="protein piccolo"
                     /calculated_mol_wt=570977
     Region          <188..736
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          452..513
                     /region_name="FYVE1_PCLO"
                     /note="FYVE-related domain 1 found in protein piccolo;
                     cd15774"
                     /db_xref="CDD:277313"
     Region          919..982
                     /region_name="FYVE2_PCLO"
                     /note="FYVE-related domain 2 found in protein piccolo;
                     cd15776"
                     /db_xref="CDD:277315"
     Region          <1029..1729
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <3782..3845
                     /region_name="CCDC47"
                     /note="PAT complex subunit CCDC47; cl46382"
                     /db_xref="CDD:480722"
     Region          4520..4615
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(4540..4546,4563,4566,4596,4600,4603..4604)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          4721..4855
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(4752,4758,4822,4824,4830)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          5097..5222
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     CDS             1..5230
                     /gene="PCLO"
                     /coded_by="XM_041477704.1:1..15693"
                     /db_xref="GeneID:121359036"
ORIGIN      
        1 mgneaslegg eglgafpega aaagdgggsa aplqslvpag veadlsqlse eerrqiaavm
       61 sraqglprgn lagaepppmq rhpeldtsrh prqpgkppdp gppglsksrt vdvlkteqra
      121 pgrspstlsl resksrtdfk edqkpsmmps flseanplsa vtsvvnkfnp fdlisdsdts
      181 heeagrkqkv apkeqgkpee qrspakhptq pqspkpavqq qgpvrptvqq tesskqqqqp
      241 ggpkqvqkpg hgqpadakqd qakqpaqprg pqksqpqpse ptkpiqqqts akpssgptkp
      301 spqqpdstkv tsqtapptkp ssqqpgpakq psqqparqga pvkpspqqtg ppkqpsqqpg
      361 pekpsaqqag pakqppqpgs gkpppqqtgl vkqvppqagp tkppsqtvgp tkplaqqagp
      421 tkppgqqpgp ekppqqtqag anqptetapk ktfcplcttt elllhtpeka nyntctqcht
      481 vvcslcgfnp nphiteisew lclncqmqrt lggdlapglg pgpqplapkq ktpippsakp
      541 spqpqpvqkk dvtpkpdpsq aadskrpppq kkqtqlpgsp pvkskqprae ptdisqqtda
      601 tpksdqvkpt qaedkqkqps vqkptadsvs tsvaaeqkqd lagprpptqq kvtdspkpel
      661 akpsqdthpa gdkpdskpvp qvsrqksdpk fasqpgarpd akaqkpidpt qtkddpkklp
      721 tkpapkpdtk papkgpqaga gpkaapaqpa pqpqppqktp eqprrfslnl ggitdapkpq
      781 pttpqetvtg klfgfgasff sqasnlista gqtgsqpsgp pppapaakqp qppaqppapq
      841 aapkeaaqaq plpkavpvkk eakpltteks epskvdgvlt kgsdlekkpg lakdskplaa
      901 eakkpdglse pekasqpems cplcktglni gskdppnfnt cteckkvvcn lcgfnpmphi
      961 aevqewlcln cqtqramsgq lgdmgkvpll kpgpsqptsk paappqkrpv pavshspqkt
     1021 stpptpaaak pkeepgvqke apklqqgrle ktlsadkiqq giqkedakpk qgklvkapsa
     1081 dkiqhasqke dpriqqtklt ktasydrvlq evqkedeklq eaklaktssa dkilhrvqke
     1141 diklqeakla kvpsadkilq giqkedpklq qmkmakalsa dkiqlaaqre dtklqevklp
     1201 kaasvdkiqh gtqkdiklqh ekikktssvd kiqeegqkee tklqrgklsk tpsadkipat
     1261 atadqkipls tleedketvl pekstphped kkeeitaeik drvaeekaev eapykglqak
     1321 eeedvkkedl ttgisqvvlk aekaqeaeip vqtaplpgtd hveavrekie keddksdtss
     1381 sqqqkspqgl sdtgyssdgi ssslgeipsh iptdekdllk etskkdtisq esppspsdla
     1441 klestvlsil eaqastlsde ksakskepse tygeqtkdql ktkplpvtpe syspdeedlk
     1501 aikegegtia eegkgaassq adykeehegd dmsarrqqry dsvedssese nspvprrkrr
     1561 tsvgssssde ykrddsqgsg deedfirkqi lemsadedas gsdddefirn qlkeisaaes
     1621 qkkeevkska kgtagkhrrm arkssagyde dagrrhswhd dddetfdesp epkyresksq
     1681 dseelavsgg gglrrfktie lnstitnkys evsepqkgvl yfdeepelem esltdspedr
     1741 srgegssslh assftpgtsp tsvssldeds dsspshkklg geskqqrkar hrthgpllpt
     1801 iedsseeeel reeeellkeq ekqreleqqq rkssskkskk dkdelraqrr rerpktppsn
     1861 lspiedaspt eelrqaaeme elhrsscsey spsiesepeg feispekiie vqkvyklpta
     1921 vslysptdeq ptglpkeesq ktlksaeevy eemmhksksf qmsnekdevf ekeslyggml
     1981 iedyiyesli edtyngtidt slvmrqdess eyiqqrgkek ktraseqvfd epqkisdlek
     2041 dyfsvetlht ivpqedivss syiipeshei vvldstvtst ieekhlldae aayeelmkrq
     2101 kmqltpgssp tqpasdfipt sdtkisggge ivdstsltss ttsaisdvsp vssttlsipd
     2161 vkitqhftae eiedeyltdy areiqeiish etsiltyset segaasvlps dtasltssts
     2221 svsttdsssp idsattgfvg padgvskpad segirivtqv plssakeyse vtmpyesiag
     2281 atkkpslesd aesveqtavc lpetaplava ttvtkskeya adiitfdtsk aekeaarkik
     2341 stveadsvki hheephkelg vdmtridltn aaseqppvci apvpvtelas etssvlthsv
     2401 vsktsmvsvp ssapavsakv fslfrsssld spahpspppp pppppppppp plppppilpk
     2461 paiypkkksq ikapaatapt vippvasvpt lestavlkdh vvpitkaytp tpppvppkps
     2521 sipaglvfsh rppevtkppi apkpaipplp iavhkpaetq pkpvslslts smtlnlvtta
     2581 eykipsptsp lsphsnkssp rlakpsqety vvitlpsepg tpteaitsqa vtswpleaps
     2641 keqipqpmqp vfttsmktmd iqsmagqsmy isgalqaipv ttqsafekip sskpeivttg
     2701 itkttvsvvk gpvpgyglgs vaitippepl hivdqpryre ngrfhplgdv idlrtltkmd
     2761 iemrdscmdl savsmdvrrq mpasdtggrp vstvqpsiin lstacvadts lpavtetvtv
     2821 mtctttvsyt tstdslvdlg hamttplqlt tskhfepayr vtgsqafsvg rdevpinlsl
     2881 gtstqavtwa ttkpvtvppv gvtngwtdls tsqepaesga vdlsttkshr tvvtmdetas
     2941 giittviedd ekpvdltagr ravccdmvyk lpfgrsctaq qpsttlpedr fgyrddhyqy
     3001 drsgsygyrg iggmkpsmsd tnlseaglfa yrsknsfdyr vgatdtavdl tsgrvttgev
     3061 mdysskttgp ypetrqisgl glstpqysqa rivssvgsqf gigsvlrssn gvvyssvatp
     3121 vpstfaittq pgsifstsvr dlptlqtvds vpslstlqqt qplprsysfl ttvaaekdkt
     3181 itaigmetgl pphsvetitt eptslipalt taseaytdvi ddevalliap eegkqqqldl
     3241 erelleleki kqqrfaeele werqeiqrfr eqekfmvqkk leelqsmkhh llfqqeeerq
     3301 aqfmmrqetl aqqqlqleqf qqlqqqlhqq leeqklrqiy qygydpsgtg spqtttdqtl
     3361 legqyasten gqfwptddtt tsasgvlgie ipqsqawytv qsdgitqyip rsgilssvse
     3421 mslkdidvre ekqlkkrssm pklrgpyeef eetleeeprc fkkivdsgvq tddedgaerg
     3481 ytnrrrrtkk svdtsvqtdd edqdewdlss rsrrktrvgk ysestteadk akpfskvssi
     3541 avqtvaeisv qtepvgtirt psirarwdak veiikhisap ektykgeslg cqtetasdtq
     3601 spqylsassp qkdkkrptpl eigytshlrp dstlqvvpsp pkspkvlysp ispvspskvi
     3661 esafvpyekp mtddispqkm lhadmakvpp sspktakmmq rsmsdpkpls ptaedssraq
     3721 fqytegfmsk gssgmtpsst qkkvkrtlpn pppeeatagt qspytsvgsv srrricrttt
     3781 marakilqdi dreldlvere saklrkkqae ldeeekeida klrylemgin rrkeallker
     3841 ekreraylqg vaeerdymsd sevnntrstr ietqhglerp rtapqtefnq fmppqtqpet
     3901 qfapatspya qyqysspalp tqaptqftqq shyqqqqply hqqvspyqtq tafqtgatms
     3961 ftpqaqppps qqpsyqlpsq mmviqpkprq ttlymepkit tnydvirnqp lmiapvstdn
     4021 syavsqlgsk ystldlrigl dernsiassp issisadsfy adidhhhtpr nyvliddige
     4081 ltkgtgalgs sfslhekdlt ktdrllrtse arraqevsdf laplqtssrl hsyvkadedp
     4141 medpyelkll khqikqefrr gaesldhlag lsqyyhgegs yrhfpkseky sigrltlekq
     4201 aakqlpaall yqkqskhkka lidpkltkfs piqesrdlep dyssymtsst stlggittra
     4261 rllqddityg lrknisdqqk ymgppltssi gaglgtalgp tmrsalqdea dksyssgsrs
     4321 rpssrpssvy gldlslkrds sssslrlkaq eaepldvsfs haapsgrtkp tslpisqsrg
     4381 ripivaqnse eesplspvgq pmgmaraaag plppisadtr dqfgsshslp evqqhmrees
     4441 rtrgydrdia fimddfqham sdseayhlrr eetdwfdkpr eprlenghil drrlpeklsh
     4501 srplsqhqdq ingkplqyif phtrlkllrd pkdhtvsgng lgirvvggke ipgssgeiga
     4561 yiakilpggn aeqtgklveg mqvlewngip ltgktyeevq siiiqqsgea eicvrldlnm
     4621 lsdsenpqhl elhepvravd kakspgvdpk qlaaelqkvs lqqsplvats gvekgshvhs
     4681 gttsatssav pspgqpgsps vskkrhsskp tettksashp itgeiqlqin ydkhlgnlii
     4741 hilqarnlap rdnngysdpf vkvyllpgrg qvmvvqnasa eykrrtkyiq kslnpewnqt
     4801 viyknisveq lkkktlevtv wdydrfssnd flgevliels sisqldntpr wyplkeqsen
     4861 idhgkshsek ssqqspkpsv iksrshgifp dpskdmqvpt iekshsspgs skssseghlr
     4921 shgpsrsqsk tsvtqthled agaaiaaaea avqqlrlqpt ahksgqsnha rkqhrhsiag
     4981 vlpiqrtqsd nlpppandnk dqsqlalrkv msdgpvkpeg arsanhrpae ssvstgssas
     5041 sfgsgysmds egsssatgen nlfpiprigk msqngqepvk qsgvgvtdse gktqvmgeik
     5101 ialkkemktd geqliveilq crnitykfks pdhlpdlyvk lyvvnistqk rvikkktrvc
     5161 rhdrepsfne tfrfslspag hslqillvsn ggkfmkktli geayiwldkv dlrkrivnwh
     5221 kllvsstqth
//
LOCUS       XP_041333653             607 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3D [Pyrgilauda ruficollis].
ACCESSION   XP_041333653
VERSION     XP_041333653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509433.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="semaphorin-3D"
                     /calculated_mol_wt=69864
     Region          <2..368
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          367..404
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          429..520
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          429..435
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409455"
     Region          440..448
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(442,487)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          454..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          462..465
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          475..479
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          482..489
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          495..504
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          507..520
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..607
                     /gene="SEMA3D"
                     /coded_by="XM_041477719.1:344..2167"
                     /db_xref="GeneID:121359043"
ORIGIN      
        1 mvfrldtqnl esgrlkcpfd pqqpfasvma deylyagtas dflgkdtalt rslgpshdhh
       61 yirtdisehy wltgakfigt fpipdtynpd ddkiyfffre isqdsgtsdk tilsrvgrvc
      121 kndmggqrsl inkwttflka rlvcsipgpe gadthfdelq difllstrde rnplvygvft
      181 ttssvfkgsa vcvysmaeir avfngpyahk esadhrwvqy egripyprpg tcpsktydpl
      241 ikstrdfpde visfirrhpl myksvypvtg apvftrinvd yrltqivvdh vmaedgqydv
      301 iflgtdvgtv lkvvsitkek wtkeevvlee lqifkhpsfi stmeisqkqq qlyigsrdgl
      361 vqlslhrcht ygkacadccl ardpycawdg nscsryapts krrarrqdvk ygdpvaqcwd
      421 vedsisheta dekvifgief nstflectpk sqqasirwyv qrsgeehree lkaderiikt
      481 ehgllirslq krdagayfck aqehtfvhti vklnlnvien gqmestqkte deegrvrdll
      541 tesrlrykdy iqlvsspsfs ldeyceqmwh rekrrqrnkg gakwkhvqem kkkrnrrhhe
      601 parppst
//
LOCUS       XP_041333665             772 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-3A [Pyrgilauda ruficollis].
ACCESSION   XP_041333665
VERSION     XP_041333665.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477731.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509433.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="semaphorin-3A"
                     /calculated_mol_wt=88637
     Region          26..518
                     /region_name="Sema_3A"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 3A (Sema3A); cd11249"
                     /db_xref="CDD:200510"
     Site            order(104..107,166..167,171,192,194..195,202,212,215..216,
                     218,223,252,276..280,282,397,401,404)
                     /site_type="other"
                     /note="putative plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200510"
     Site            order(253..254,256,259..261,295,298..299,301,303,307,
                     330..337,363..366,410,425)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200510"
     Region          516..>552
                     /region_name="PSI"
                     /note="domain found in Plexins, Semaphorins and Integrins;
                     smart00423"
                     /db_xref="CDD:214655"
     Region          581..671
                     /region_name="Ig_Sema3"
                     /note="Immunoglobulin (Ig)-like domain of class III
                     semaphorin Sema3; cd05871"
                     /db_xref="CDD:409455"
     Region          581..586
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409455"
     Region          591..599
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409455"
     Site            order(593,638)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409455"
     Region          605..611
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409455"
     Region          613..616
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409455"
     Region          626..630
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409455"
     Region          633..640
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409455"
     Region          646..655
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409455"
     Region          658..671
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409455"
     CDS             1..772
                     /gene="SEMA3A"
                     /coded_by="XM_041477731.1:121..2439"
                     /db_xref="GeneID:121359052"
ORIGIN      
        1 mgwlrgiall slgvllagrv ncqhvknnvp rlklsykeml esnnvinfng lansssyhtf
       61 lldeergrly vgakdhifsf nlvnikeyqk ivwpvshsrr deckwagkdi vrecanfikv
      121 lkaynqthly acgtgafhpv ctyievgshp ednifrmees hfengrgksp ydpklltasl
      181 lvdgelysgt aadfmgrdfa ifrtlghhhp irteqhdsrw lndprfvsah lipesdnped
      241 dkiyfffren aidgehtgka tharigqick ndfgghrslv nkwttflkar licsvpgpng
      301 idthfdelqd vflmnskdpk npivygvftt ssnifkgsav cmysmtdvrr vflgpyahrd
      361 gpnyqwvpyq grvpyprpgt cpsktfggfd stkdlpdevi tfarshpamy npvfpinnrp
      421 imiktdvdyq ftqivvdrvd aedgqydvmf igtdigtvlk vvsipketwh eleevlleem
      481 tvfreptvis amkistkqqq lyigsatgvs qlplhrcdvy gkacaeccla rdpycawdgs
      541 scsryfptak rrtrrqdirn gdplthcsdl qhhnnpsgqv leekiiygve nsstflecsp
      601 ksqravvywq fqkqnddrke eikvgdhmir teqglllrsl hrrdsgvyfc havehgfmqt
      661 llkvtlevid nehleellhk eedgdgskik datnsmtpsq kiwyrdfmql inhpnlntmd
      721 efceqvwkrd rkqrrqrpan aqvntnkwkh lqenkkgrnr rtheferapr sv
//
LOCUS       XP_041333677             579 aa            linear   VRT 06-MAY-2021
DEFINITION  sulfite oxidase, mitochondrial, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041333677
VERSION     XP_041333677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509456.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>579
                     /product="sulfite oxidase, mitochondrial"
     Region          181..255
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     Region          280..574
                     /region_name="eukary_SO_Moco"
                     /note="molybdopterin binding domain of sulfite oxidase
                     (SO). SO catalyzes the terminal reaction in the oxidative
                     degradation of the sulfur-containing amino acids cysteine
                     and methionine. Common features of all known members of
                     the sulfite oxidase (SO) family of...; cd02111"
                     /db_xref="CDD:239029"
     Site            order(309..310,312,314,359,428,459,464,472,475,477..478)
                     /site_type="active"
                     /note="Moco binding site [active]"
                     /db_xref="CDD:239029"
     Site            359
                     /site_type="other"
                     /note="metal coordination site [ion binding]"
                     /db_xref="CDD:239029"
     CDS             1..579
                     /gene="SUOX"
                     /coded_by="XM_041477743.1:12..>1748"
                     /db_xref="GeneID:121359057"
ORIGIN      
        1 malgrgqrrp dwigdnrdrt glglgggttg tgrgrvaaev pdcrfprqry rgcfpvpvpa
       61 paalsrpaaa aamlllrama grrlpplmql prrcsrlaag sgapeghrep apgghreaip
      121 gghrgetpgg hrgetpgghr gaapvlaall glgavlayge rqrrtaqaar aappapfpry
      181 traevarhrs pkervwvtyg tevfdvtdfv elhpggpdki llaaggalep fwalyavhgq
      241 phvlellrdy kvgelspeda apppgdtedp fagdpprhpa lrvnsskpfn aepppelltq
      301 sfltpnelff trnhlpvpav epgsyrlrve apggralsls laelrqrfpk hevtatlqca
      361 gnrrsemsrv rpvkglawdi gaistarwgg arlrdvllaa gvgdntgdge ewhvcfegld
      421 adasgtpyga siplkralsa eaevllayem ngrelprdhg fpvrvlvpgv vgarsvkwlr
      481 svavspaesp shwqqndykg fcpsvdwdsv dfgaapaiqe lpvqsaitep ragaavpage
      541 ltvkgyawsg ggrevirvdv sldggrtwre aeldprprr
//
LOCUS       XP_041333689             638 aa            linear   VRT 06-MAY-2021
DEFINITION  RAS protein activator like-3, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041333689
VERSION     XP_041333689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477755.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509467.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>638
                     /product="RAS protein activator like-3"
     Region          <1..>32
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          34..165
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          156..479
                     /region_name="RasGAP_DAB2IP"
                     /note="Ras-GTPase Activating Domain of DAB2IP and similar
                     proteins; cd05136"
                     /db_xref="CDD:213338"
     Site            order(195,232,234,236..237,239,242,246,338,346..347,
                     350..351,354,375,378..379,382,386,388,393..394)
                     /site_type="other"
                     /note="putative RAS interface [polypeptide binding]"
                     /db_xref="CDD:213338"
     CDS             1..638
                     /gene="RASAL3"
                     /coded_by="XM_041477755.1:<1..>1914"
                     /db_xref="GeneID:121359065"
ORIGIN      
        1 slvpppeldl tgdnvtvrpv hgsvvgerfc fqpqdncerl elsltlwvye grdlparrrl
       61 rchlhldgav farttakpag adgqlfwgel fhlaalppar altvalcrdd hpgwqpvaav
      121 tiplaelaaa gqplerwypl sggggerapa vrlrgryrqv rvlpivryke laefitfhyr
      181 elcgrlepai aarhkeelag alvrvlqstg kaksflidlg vaeldrfdeh ealifrentl
      241 atkaideymk lvgakylqdt lgevvaqlcs seessevdps rcsglelseh qqhlrqvcee
      301 tlrritdgse sfpaelgevf aawreacaar gkaaigqrlv saslflrflc paimspslfg
      361 lvqeypgeat artltlvakv iqnlanfttf gekepymtfm nafleqnwat mteflqavat
      421 peasahmaty egyvdlalel atlhlllcdi fssldqatqe eleplptilr airegtrvpv
      481 svrlsstarg spseppkpgf vpprdlgkhs pliksqslts vrrlrggree gtatgtdpep
      541 spepspvplp vparrrrnvq rtqsvpaqgk agpgsaghaa evttpeggtg spapgdgppr
      601 gklrssaslp rksavpwqrl aedaaapgel yalrplek
//
LOCUS       XP_041333700             351 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-actinin-4-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041333700
VERSION     XP_041333700.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477766.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509478.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..351
                     /product="alpha-actinin-4-like"
     Region          83..186
                     /region_name="Spectrin"
                     /note="Spectrin repeat; pfam00435"
                     /db_xref="CDD:395348"
     Region          203..291
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(212,214,216,223,274,276,278,285)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          296..>314
                     /region_name="EFhand_Ca_insen"
                     /note="Ca2+ insensitive EF hand; pfam08726"
                     /db_xref="CDD:430177"
     CDS             1..351
                     /gene="LOC121359075"
                     /coded_by="XM_041477766.1:<1..1056"
                     /db_xref="GeneID:121359075"
ORIGIN      
        1 gliaahdqfk stlpdadker eailgiqrea qriadlhgiq lpgnnpytsv tpqiinsnsi
       61 sqlvpkrdqa lqeeqsrqns nehlrrqfgs qanrvgpwiq tkmeeigris iemngtledq
      121 lnhlkeyeen iveykpnlel leqqhqlvqe alifdnqhsn ytmehlrvgw eqllttiart
      181 inevenqilt rdakgisqeq mqefrasfnh fdkdhggalg peefkaclis lgydvendrq
      241 pkrrtdsadf rallgpagsg lgdaefqrim avvdpngsgs vtfqafidfm srettdtdta
      301 eqvinsfrvl agdkvgtaga gaalggspri pedppgsrip dppasyyatv d
//
LOCUS       XP_041333713             249 aa            linear   VRT 06-MAY-2021
DEFINITION  trypsin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041333713
VERSION     XP_041333713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477779.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509500.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="trypsin-like"
                     /calculated_mol_wt=26337
     Region          27..245
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            27
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(66,110,203)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(197,218,220)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..249
                     /gene="LOC121359080"
                     /coded_by="XM_041477779.1:15..764"
                     /db_xref="GeneID:121359080"
ORIGIN      
        1 mkcllflafi gvavafptfa eddddkivgg ytcaknsvpy qvslnsgyhf cggslissqw
       61 vvsaahcyks riqvqlgkhn leltestqqf insakvirhs gyssytldnd imliklatpa
      121 tlnnavqtip lpsscvatgt tclisgwgnt lssgsnypdq lqclnapvls aqqcsdaypg
      181 qitknmmcvg yveggkdscq gdsggpvacn gelqgivswg ygcaqkghpg vytkvcnyvs
      241 wiqstiaan
//
LOCUS       XP_041333727             143 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-like protein C, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041333727
VERSION     XP_041333727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477793.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509501.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>143
                     /product="delta-like protein C"
     Region          30..63
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          72..102
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     CDS             1..143
                     /gene="LOC121359086"
                     /coded_by="XM_041477793.1:<1..>433"
                     /codon_start=3
                     /db_xref="GeneID:121359086"
ORIGIN      
        1 gqcrdppagp splcrcppgf sgrrcehnad dctpnpcahg gtcqdgansf tcsctlgfgg
       61 prcrrragac apspcrhggt cfthfsgpvc acppgfmgvr ceeavgappp qsagpqrrga
      121 aplalcalpl lllapgvgla var
//
LOCUS       XP_041333740             218 aa            linear   VRT 06-MAY-2021
DEFINITION  C-type lectin domain family 4 member E-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333740
VERSION     XP_041333740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509511.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="C-type lectin domain family 4 member E-like"
                     /calculated_mol_wt=24286
     Region          85..212
                     /region_name="CLECT_DC-SIGN_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in human dendritic cell (DC)-specific intercellular
                     adhesion molecule 3-grabbing non-integrin (DC-SIGN) and
                     the related receptor, DC-SIGN receptor (DC-SIGNR);
                     cd03590"
                     /db_xref="CDD:153060"
     Site            order(144,176,178,183,189,193,199..202)
                     /site_type="other"
                     /note="carbohydrate binding site"
                     /db_xref="CDD:153060"
     CDS             1..218
                     /gene="LOC121359092"
                     /coded_by="XM_041477806.1:69..725"
                     /db_xref="GeneID:121359092"
ORIGIN      
        1 mmngqgrvsp gsaapaeerg ctwlniwvfl ifalatkaaf vtlclwlvlp lchssdqpsa
       61 lqqqfsewec dsavpqgtdr swtccpkgwr rfqgscyfls ldkmnfaesa qncsgmgsql
      121 vvisskaeqe flseqtkqpp krvnvyiglf akkvgqwqwv dktpynvtaa fwregepnyf
      181 pgenctvihv pteppnnwnd igsdlenhri ceaaaviv
//
LOCUS       XP_041333758             184 aa            linear   VRT 06-MAY-2021
DEFINITION  heparan sulfate glucosamine 3-O-sulfotransferase 3B1, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333758
VERSION     XP_041333758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509525.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>184
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     3B1"
     Region          <17..181
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..184
                     /gene="LOC121359112"
                     /coded_by="XM_041477824.1:1..>552"
                     /db_xref="GeneID:121359112"
ORIGIN      
        1 mektpsyfvt keaparissm skgtklivvv rdpvtraisd ytqtlskkpd iptfesltfk
       61 nrttglidts wsaiqigiya khlenwllhf pigqilfvsg erlisdpage lgrvqdflgl
      121 kriitdkhfy fnktkgfpcl kkaegsskph clgktkgrth pdidqevvqr lrdfyrpfnm
      181 kfyq
//
LOCUS       XP_041333772             681 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333772
VERSION     XP_041333772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..681
                     /product="glutamine--fructose-6-phosphate aminotransferase
                     [isomerizing] 1 isoform X1"
                     /calculated_mol_wt=76633
     Region          1..681
                     /region_name="PLN02981"
                     /note="glucosamine:fructose-6-phosphate aminotransferase"
                     /db_xref="CDD:215531"
     CDS             1..681
                     /gene="GFPT1"
                     /coded_by="XM_041477838.1:90..2135"
                     /db_xref="GeneID:121359122"
ORIGIN      
        1 mcgifaylny hvprtrreil etlikglqrl eyrgydsagv gldggndkdw eanackihii
       61 kqtgkvkald eevhkqqdmd ldiefdvhlg iahtrwathg epkpvnshpq rsdknnefiv
      121 ihngiitnyk dlkkfleskg ydfesetdte sivklvkymy dnrdsddisf stlverviqq
      181 legafalvfk svhypgqavg trrgspllig vrsehklstd hipilyrtgk dkkgscnlsr
      241 vdsttclfpv eekaveyyfa sdasavieht nrvifleddd vaavvdgrls ihrvkrtagd
      301 hpgravqtlq melqqimkgn fssfmqkeif eqpesvvntm rgrvnfddyt vnlgglkdhi
      361 keiqrcrrli liacgtsyha gvatrqvlee ltelpvmvel asdfldrntp vfrddvcffl
      421 sqsgetadtl mclryckerg altvgitntv gssisretdc gvhinagpei gvastkayts
      481 qfvslvmfal mmcddrismq errkeimrgl kglpdlikev lsmddeiqkl atelyhqksv
      541 limgrgyhya tclegalkik eitymhsegi lagelkhgpl alvdklmpvi miimrdhtya
      601 kcqnalqqvi arqgrpvvic dkedietikn nkrtikvphs vdclqgilsv iplqllafhl
      661 avlrgydvdf prnlaksvtv e
//
LOCUS       XP_041333780             676 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333780
VERSION     XP_041333780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..676
                     /product="glutamine--fructose-6-phosphate aminotransferase
                     [isomerizing] 1 isoform X2"
                     /calculated_mol_wt=76061
     Region          1..670
                     /region_name="PLN02981"
                     /note="glucosamine:fructose-6-phosphate aminotransferase"
                     /db_xref="CDD:215531"
     CDS             1..676
                     /gene="GFPT1"
                     /coded_by="XM_041477846.1:90..2120"
                     /db_xref="GeneID:121359122"
ORIGIN      
        1 mcgifaylny hvprtrreil etlikglqrl eyrgydsagv gldggndkdw eanackihii
       61 kqtgkvkald eevhkqqdmd ldiefdvhlg iahtrwathg epkpvnshpq rsdknnefiv
      121 ihngiitnyk dlkkfleskg ydfesetdte sivklvkymy dnrdsddisf stlverviqq
      181 legafalvfk svhypgqavg trrgspllig vrsehklstd hipilyrtgk dkkgscnlsr
      241 vdsttclfpv eekaveyyfa sdasavieht nrvifleddd vaavvdgrls ihrvkrtagd
      301 hpgravqtlq melqqimkgn fssfmqkeif eqpesvvntm rgrvnfddyt vnlgglkdhi
      361 keiqrcrrli liacgtsyha gvatrqvlee ltelpvmvel asdfldrntp vfrddvcffl
      421 sqsgetadtl mclryckerg altvgitntv gssisretdc gvhinagpei gvastkayts
      481 qfvslvmfal mmcddrismq errkeimrgl kglpdlikev lsmddeiqkl atelyhqksv
      541 limgrgyhya tclegalkik eitymhsegi lagelkhgpl alvdklmpvi miimrdhtya
      601 kcqnalqqvi arqgrpvvic dkedietikn nkrtikvphs vdclqgilsv iplqllafhl
      661 avlrgydvdr iaasrd
//
LOCUS       XP_041333794             702 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipase DDHD2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333794
VERSION     XP_041333794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477860.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..702
                     /product="phospholipase DDHD2"
                     /calculated_mol_wt=79055
     Region          31..100
                     /region_name="WWE"
                     /note="WWE domain; pfam02825"
                     /db_xref="CDD:460715"
     Region          369..434
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          485..687
                     /region_name="DDHD"
                     /note="DDHD domain; pfam02862"
                     /db_xref="CDD:460725"
     CDS             1..702
                     /gene="DDHD2"
                     /coded_by="XM_041477860.1:53..2161"
                     /db_xref="GeneID:121359132"
ORIGIN      
        1 maalepprpp paaadppepe pggryeavvp hwfyckvads rerwvpfsaq dserleaahg
       61 agkdqdgvvv ptsggrydvh lrarrrvavy weeeaaevrr ctwfykgdkd nkfipysesf
      121 seeleeaymi avtlgewkkk lespnrevii lhnpklmvhy hpvassddwv stpteqgrpr
      181 tvkrgvenia veipngeplq idhlvfvvhg igpacdirfr sivqcvndfr nvslsmlqah
      241 fkkaqeqqqv grveflpvnw hsslhstgvd vdleritlps inrlrhfind tildvffyns
      301 stycqtivdt vasemnrlhr lflqrnpcfr ggvsiaghsl gslilfdllt nqkadpeede
      361 hcaqgsrtts gtggieevke ilkklelsey cdvfekekmd kqalflctek nlkeigiplg
      421 prmkilhyis sktemkgrss aapghgarga eprspsqhgd ssedgrscqy rdvglgqvsa
      481 nypqlnykpt iffafgspig mfltvrgvkr idpnyslptc kgffnifhpf dpvayriepm
      541 ivpelefepm llphhkgrkr mhlelkeglt rmsvdlknnl lgslrvawqs ftrapvpale
      601 agsteaeaea eagtekqpet kpeeplaavk eetppinvgr lnrgnridyv lqekpiesfn
      661 eylfalqghl cywesedtvl lvlkeiyqtq gitldqplpg sq
//
LOCUS       XP_041333807             410 aa            linear   VRT 06-MAY-2021
DEFINITION  BAG family molecular chaperone regulator 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333807
VERSION     XP_041333807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="BAG family molecular chaperone regulator 4
                     isoform X1"
                     /calculated_mol_wt=44656
     Region          336..408
                     /region_name="BAG"
                     /note="BAG domain; pfam02179"
                     /db_xref="CDD:460475"
     CDS             1..410
                     /gene="BAG4"
                     /coded_by="XM_041477873.1:1..1233"
                     /db_xref="GeneID:121359137"
ORIGIN      
        1 mvpprpqrkr rhapvppppr nrprragptr rcpfkprqpc argrrrlaga ggerppighg
       61 aswgvalaaa meprtagpgp paaaaqamds pyangayspp yphyaslpqa rgfycsgppr
      121 spyppepagl yrppspapaw syvppecppe gsalrrqqvp gysppqtpgm pvpqyqygds
      181 sagvtgqgpv pqpraledtw gphsgfgvqp ryawpasghg slyvsdshps wtgsgapshp
      241 psweaqgqdc vydrpeqsps qhsyysdgnq rhsgpvnehr vakpapcqpr vqysaqpqly
      301 dlgprkpmar sqelgfkaae qpathpaalq peiqrilhvm geaerleeev defvgkktdk
      361 syrlleemlt kllleldsie tggqdsvrqa rkesvhriqa ileklerkgl
//
LOCUS       XP_041333817             323 aa            linear   VRT 06-MAY-2021
DEFINITION  BAG family molecular chaperone regulator 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333817
VERSION     XP_041333817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="BAG family molecular chaperone regulator 4
                     isoform X2"
                     /calculated_mol_wt=35432
     Region          <45..259
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          249..321
                     /region_name="BAG"
                     /note="BAG domain; pfam02179"
                     /db_xref="CDD:460475"
     CDS             1..323
                     /gene="BAG4"
                     /coded_by="XM_041477883.1:389..1360"
                     /db_xref="GeneID:121359137"
ORIGIN      
        1 mdspyangay sppyphyasl pqargfycsg pprspyppep aglyrppspa pawsyvppec
       61 ppegsalrrq qvpgysppqt pgmpvpqyqy gdssagvtgq gpvpqprale dtwgphsgfg
      121 vqpryawpas ghgslyvsds hpswtgsgap shppsweaqg qdcvydrpeq spsqhsyysd
      181 gnqrhsgpvn ehrvakpapc qprvqysaqp qlydlgprkp marsqelgfk aaeqpathpa
      241 alqpeiqril hvmgeaerle eevdefvgkk tdksyrllee mltkllleld sietggqdsv
      301 rqarkesvhr iqailekler kgl
//
LOCUS       XP_041333830             133 aa            linear   VRT 06-MAY-2021
DEFINITION  U6 snRNA-associated Sm-like protein LSm1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333830
VERSION     XP_041333830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..133
                     /product="U6 snRNA-associated Sm-like protein LSm1"
                     /calculated_mol_wt=15064
     Region          4..77
                     /region_name="LSm1"
                     /note="Like-Sm protein 1; cd01728"
                     /db_xref="CDD:212475"
     Site            order(10,13..14,19,21..23,26,28,33..36,39..40,42,63..75)
                     /site_type="other"
                     /note="putative oligomer interface [polypeptide binding]"
                     /db_xref="CDD:212475"
     Site            order(18..24,26..38,40..44)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212475"
     Site            order(36,38,67)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212475"
     Site            63..74
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212475"
     Region          <82..131
                     /region_name="PRK10788"
                     /note="periplasmic folding chaperone; Provisional"
                     /db_xref="CDD:182731"
     CDS             1..133
                     /gene="LSM1"
                     /coded_by="XM_041477896.1:90..491"
                     /db_xref="GeneID:121359146"
ORIGIN      
        1 mnympgtasl iqdidkkhlv llrdgrtlig ylrsidqfan lvlhqtveri hvgkkygdip
       61 rgifvvrgen vvllgeidle kesdtplqqv sieeileeqr veqqakqese klkvqalker
      121 glsvpradtl dey
//
LOCUS       XP_041333840            2009 aa            linear   VRT 06-MAY-2021
DEFINITION  histone acetyltransferase KAT6A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333840
VERSION     XP_041333840.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477906.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2009
                     /product="histone acetyltransferase KAT6A isoform X1"
                     /calculated_mol_wt=225358
     Region          85..162
                     /region_name="H15"
                     /note="Domain in histone families 1 and 5; smart00526"
                     /db_xref="CDD:197772"
     Region          206..263
                     /region_name="PHD1_MOZ_MORF"
                     /note="PHD finger 1 found in monocytic leukemia
                     zinc-finger protein (MOZ) and its factor (MORF); cd15618"
                     /db_xref="CDD:277090"
     Site            order(209,211..212,214,231,236..238,243..245,258,260..262)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277090"
     Site            order(245,249,252..253,256,258..259,261,263)
                     /site_type="other"
                     /note="PHD2 interface [polypeptide binding]"
                     /db_xref="CDD:277090"
     Region          265..311
                     /region_name="PHD2_KAT6A_6B"
                     /note="PHD finger 2 found in monocytic leukemia
                     zinc-finger protein (MOZ) and its factor (MORF); cd15527"
                     /db_xref="CDD:277002"
     Site            order(265,270,283..287)
                     /site_type="other"
                     /note="PHD1 interface [polypeptide binding]"
                     /db_xref="CDD:277002"
     Site            order(277..283,286,301..304)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277002"
     Region          <502..776
                     /region_name="PLN00104"
                     /note="MYST -like histone acetyltransferase; Provisional"
                     /db_xref="CDD:215056"
     CDS             1..2009
                     /gene="KAT6A"
                     /coded_by="XM_041477906.1:333..6362"
                     /db_xref="GeneID:121359154"
ORIGIN      
        1 mvklanplyt ewileaikkv kkqkqrpsee ricnavsssh gldrktvleq lelsvkdgti
       61 lkvsnkglns ykdpdnpgri alpkprnhgk ldgkpnvdwn klikraiegl aessgsslkn
      121 ierflkgqkd vsalfggsaa sifhqqlrla vkravghgrl lkdgplyqln tkattnadgk
      181 esfeslsclp pvcllphekd kpvaepipic sfclgtkeqn rekkpeelis cadcgnsghp
      241 sclkfspelt vrvkalrwqc iecktcsscr dqgknadnml fcdscdrgfh meccdppltr
      301 mpkgmwicqi crprkkgrkl lqkkaaqikr ryanpigrpk nrlknqntts kgpfskvrtg
      361 pgrgrkrkma lssqsasegg yleqtdvldf crdgsntlkf nkktkglidg ltkfftpspd
      421 grkargevvd ysqqyrirkk gtrksstsew ptdnqdgwdg kqeteerffg sqdvlnekdm
      481 elfrdiqeqa lqkvgvtgpp dpqvrcpsvi efgkyeiqtw ysspypqeys rlpklylcef
      541 clkymksrti lqqhmkkcgw fhppaneiyr knnisvfevd gnvstiycqn lcllaklfld
      601 hktlyydvep flfyvltqnd vkgchlvgyf skekhcqqky nvscimilpq yqrkgygrfl
      661 idfsyllskr egqagspekp lsdlgrlsym aywksvilec lyhqrdkqls ikklskltgi
      721 cpqditstlh hlrmldfrsd qfvivrrekl iqehmaklrt nvrpidvdae clrwtpvivs
      781 nsvvsedeee etedgeneeq qkqkekdpet sqmvksvswe kkeqepyspt esekkpdiva
      841 pansarpnkh ifsldslpan sqpsrrgrwn rkskklhepf cekepalpie ektavpsgrc
      901 seceeksaas rgrcsdceek svalqgrcge ceekspasrg ryaeddeksa asqgqygkge
      961 ksavphrqhs eamerwrgql kknteppkcr fpedcdrlpr rysdsdrall rcfsesseee
     1021 ddepvsprss sppvltkptl krkkpilhrk rrvrkrkhhn ssvvtetise ttevldepfe
     1081 dsdserpmpq leptfeieee eeeeeedeee eselsssgyf qhlaqpdtlr hrpsskrksr
     1141 deeesddnng npplkplsml rnseakdssl epdtstpvkk kkgwpkgksr kpvhwkkrpg
     1201 rkpgfklnre evplsvqdet vdevvanskp grkakiadke ecveqkdlpl teerkeedvn
     1261 meaeevgege eedtassevr avspvdsnss pvpevkepei eeeaeekpri leeqrqseee
     1321 qqeldepehd heeeeevavv tnqnedhdad deddghpesl kkkeleeqpv kegvkeepqv
     1381 qecfletsip ssredakekd eaeadseeeq asnetsvgse hvpgseddhe eeqsnkegli
     1441 elkeeeeiph seldletvqa vqsltqeesn ehdvayqdce etlaacqtlq sytqteedpq
     1501 ismvedcqas ehnspissvq shpsqsvrsv sspnvpales sytqispeqg slsapsmqnm
     1561 etspmmdvps vsdhsqqvvd sgfsdlgsie sttenyenps sydstmggsi cgnnssqssc
     1621 sygglsssss ltqnscvvtq qmanigsscs mmqqnsvqpa ancnikspqs cvverppsnq
     1681 qpttqpqqqq pqsqqpqppp ppqqqpplsq csmnnsftpa pmimeipesg stgnisiyer
     1741 ipgdfgagsy sqpsatfsla klqqltntim dphampyshs pavtsyatsv slsntglaql
     1801 apshplagtp qaqatmtppp nlasttmnlt spllqcnmsa tnigiphtqr lqgqmpvkgh
     1861 isirsksapl psasahqqql ygrsppavam qagprtlavq rgmnmgvnlm ptapynvnsm
     1921 nmnlnamnsy rmtqpmmnss yhsnpaymnq taqypmqmqm gmmgsqaytq qpmqpnphgn
     1981 mmytgpshhs ymnaagvpkq slngpymrr
//
LOCUS       XP_041333849            2008 aa            linear   VRT 06-MAY-2021
DEFINITION  histone acetyltransferase KAT6A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333849
VERSION     XP_041333849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2008
                     /product="histone acetyltransferase KAT6A isoform X2"
                     /calculated_mol_wt=225230
     Region          85..162
                     /region_name="H15"
                     /note="Domain in histone families 1 and 5; smart00526"
                     /db_xref="CDD:197772"
     Region          206..263
                     /region_name="PHD1_MOZ_MORF"
                     /note="PHD finger 1 found in monocytic leukemia
                     zinc-finger protein (MOZ) and its factor (MORF); cd15618"
                     /db_xref="CDD:277090"
     Site            order(209,211..212,214,231,236..238,243..245,258,260..262)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277090"
     Site            order(245,249,252..253,256,258..259,261,263)
                     /site_type="other"
                     /note="PHD2 interface [polypeptide binding]"
                     /db_xref="CDD:277090"
     Region          265..311
                     /region_name="PHD2_KAT6A_6B"
                     /note="PHD finger 2 found in monocytic leukemia
                     zinc-finger protein (MOZ) and its factor (MORF); cd15527"
                     /db_xref="CDD:277002"
     Site            order(265,270,283..287)
                     /site_type="other"
                     /note="PHD1 interface [polypeptide binding]"
                     /db_xref="CDD:277002"
     Site            order(277..283,286,301..304)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277002"
     Region          <502..776
                     /region_name="PLN00104"
                     /note="MYST -like histone acetyltransferase; Provisional"
                     /db_xref="CDD:215056"
     CDS             1..2008
                     /gene="KAT6A"
                     /coded_by="XM_041477915.1:301..6327"
                     /db_xref="GeneID:121359154"
ORIGIN      
        1 mvklanplyt ewileaikkv kkqkqrpsee ricnavsssh gldrktvleq lelsvkdgti
       61 lkvsnkglns ykdpdnpgri alpkprnhgk ldgkpnvdwn klikraiegl aessgsslkn
      121 ierflkgqkd vsalfggsaa sifhqqlrla vkravghgrl lkdgplyqln tkattnadgk
      181 esfeslsclp pvcllphekd kpvaepipic sfclgtkeqn rekkpeelis cadcgnsghp
      241 sclkfspelt vrvkalrwqc iecktcsscr dqgknadnml fcdscdrgfh meccdppltr
      301 mpkgmwicqi crprkkgrkl lqkkaaqikr ryanpigrpk nrlknqntts kgpfskvrtg
      361 pgrgrkrkma lssqsasegg yleqtdvldf crdgsntlkf nkktkglidg ltkfftpspd
      421 grkargevvd ysqqyrirkk gtrksstsew ptdnqdgwdg kqeteerffg sqdvlnekdm
      481 elfrdiqeqa lqkvgvtgpp dpqvrcpsvi efgkyeiqtw ysspypqeys rlpklylcef
      541 clkymksrti lqqhmkkcgw fhppaneiyr knnisvfevd gnvstiycqn lcllaklfld
      601 hktlyydvep flfyvltqnd vkgchlvgyf skekhcqqky nvscimilpq yqrkgygrfl
      661 idfsyllskr egqagspekp lsdlgrlsym aywksvilec lyhqrdkqls ikklskltgi
      721 cpqditstlh hlrmldfrsd qfvivrrekl iqehmaklrt nvrpidvdae clrwtpvivs
      781 nsvvsedeee etedgeneeq qkqkekdpet smvksvswek keqepyspte sekkpdivap
      841 ansarpnkhi fsldslpans qpsrrgrwnr kskklhepfc ekepalpiee ktavpsgrcs
      901 eceeksaasr grcsdceeks valqgrcgec eekspasrgr yaeddeksaa sqgqygkgek
      961 savphrqhse amerwrgqlk knteppkcrf pedcdrlprr ysdsdrallr cfsesseeed
     1021 depvsprsss ppvltkptlk rkkpilhrkr rvrkrkhhns svvtetiset tevldepfed
     1081 sdserpmpql eptfeieeee eeeeedeeee selsssgyfq hlaqpdtlrh rpsskrksrd
     1141 eeesddnngn pplkplsmlr nseakdssle pdtstpvkkk kgwpkgksrk pvhwkkrpgr
     1201 kpgfklnree vplsvqdetv devvanskpg rkakiadkee cveqkdlplt eerkeedvnm
     1261 eaeevgegee edtassevra vspvdsnssp vpevkepeie eeaeekpril eeqrqseeeq
     1321 qeldepehdh eeeeevavvt nqnedhdadd eddghpeslk kkeleeqpvk egvkeepqvq
     1381 ecfletsips sredakekde aeadseeeqa snetsvgseh vpgseddhee eqsnkeglie
     1441 lkeeeeiphs eldletvqav qsltqeesne hdvayqdcee tlaacqtlqs ytqteedpqi
     1501 smvedcqase hnspissvqs hpsqsvrsvs spnvpaless ytqispeqgs lsapsmqnme
     1561 tspmmdvpsv sdhsqqvvds gfsdlgsies ttenyenpss ydstmggsic gnnssqsscs
     1621 ygglsssssl tqnscvvtqq manigsscsm mqqnsvqpaa ncnikspqsc vverppsnqq
     1681 pttqpqqqqp qsqqpqpppp pqqqpplsqc smnnsftpap mimeipesgs tgnisiyeri
     1741 pgdfgagsys qpsatfslak lqqltntimd phampyshsp avtsyatsvs lsntglaqla
     1801 pshplagtpq aqatmtpppn lasttmnlts pllqcnmsat nigiphtqrl qgqmpvkghi
     1861 sirsksaplp sasahqqqly grsppavamq agprtlavqr gmnmgvnlmp tapynvnsmn
     1921 mnlnamnsyr mtqpmmnssy hsnpaymnqt aqypmqmqmg mmgsqaytqq pmqpnphgnm
     1981 mytgpshhsy mnaagvpkqs lngpymrr
//
LOCUS       XP_041333860            1938 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041333860
VERSION     XP_041333860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477926.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1938
                     /product="ankyrin-1 isoform X1"
                     /calculated_mol_wt=212109
     Region          2..346
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          18..46
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          48..79
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(83,87..88,91..93,95..96,100,103,112,114,116,
                     120..121,124..126,128..129,133,136,145,147,149,153..154,
                     157..159,161..162,166,169)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          114..145
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          117..168
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          147..171
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          180..207
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          210..240
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          223..511
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          242..273
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          275..306
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          308..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          344..372
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(347..348,351..353,355..356,360,363,372,374,376,
                     380..381,384..386,388..389,393,396,405,407,409,413..414,
                     417..419,421..422,426,429,438)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          374..405
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          388..676
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          407..438
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          440..471
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          473..502
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          507..537
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(508,512..513,516..518,520..521,525,528,537,539,541,
                     545..546,549..551,553..554,558,561,570,572,574,578..579,
                     582..584,586..587,591,594)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          539..570
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          572..600
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          575..>784
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          605..635
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          638..669
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(671,673,677..678,681..683,685..686,690,693,702,704,
                     706,710..711,714..716,718..719,723,726,735,737,739,
                     743..744,747..749,751..752,756,759)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          671..702
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          704..735
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          737..765
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          948..1052
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1273..1402
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1440..1523
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1938
                     /gene="ANK1"
                     /coded_by="XM_041477926.1:16..5832"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 maarkgrsgp dvaadaatsf lraarsgnld kaldhlrngv dintcnqngl nalhlaskeg
       61 hvkmvvellh keivletttk kgntalhiaa lagqqdvvre lvnyganvna qsqkgftply
      121 maaqenhlev vkfllengan qnvatedgft plavalqqgh envvahliny gtkgkvrlpa
      181 lhiaarnddt rtaavllqnd pnadvlsktg ftplhiaahy enlsvaqlll nrgasvnftp
      241 qngitplhia srrgniimvr llldrgaqie trtkdeltpl hcaarnghvr iaeilldhga
      301 piqaktkngl spihmaaqgd hldcvrlllq ysadidditl dhltplhvaa hcghhrvakl
      361 lvekgakpns ralngftplh iackknhirv melllktgas idavtesglt plhvaafmgh
      421 lpivktllqr gaspnvsnvk vetplhmaar aghtdvakyl lqnkakanak akddqtplhc
      481 aarightgmv klllennanp nlattaghtp lhitareghm dtalallekg asqtcmtkkg
      541 ftplhvaaky gkvdvaelll ahdahpnaag kngltplhva vhhnnleivr lllpkgssph
      601 nsawngytpl hiaakqnqme vassllqyga sanaesmqgv tplhlasqeg hadmvallfs
      661 kqangnlgnk sgltplhlva qeghvlvadv lvkhgvtvda vtrmgytplh vashygnikl
      721 vkfllqhqad vnaktklgyt plhqaaqqgh tdvvtlllkh gaspneistn gttplaiakr
      781 lgyisvtdvl kivteeidip svgdkhrmsf petvdeildv sedegtahvt vmeeeliapk
      841 pktpdlreqe gkreilefmt tttleqtves pavlqvpcip petvvtraee teqvgpvete
      901 aeqvsllhap svspqepske fdedslipss patetsdnis pvaspvhtgf lvsfmvdarg
      961 gsmrgsrhhg lrvvipprac aaptritcrl vkpqklpapp plaeeeglgs riialgpaga
     1021 qflspvivei phfasygrgd relvvlrsen gsvwkehrnr yeesymdqll ngmdeelesq
     1081 eeldkkrvcr iittdfplyf vvmsricqdc dmigpeggcl kstlvpmvqa tfpdtavtkr
     1141 vrlalqaqpv pdelvtkllg nqatfspivt veprrrkfhr piglriplpp swkdnprdsg
     1201 egdttslrll csviggtaqa qweditgttk lvyenecanf ttnvsarfwl adcprtaeav
     1261 hfatmlykel tavpymakfv vfakmndare grlrcycmtd dkvdktleqh enftevarsr
     1321 dievvegmpl hvelsgnlvp vkkaaqprtf lfqsfrenrl vipikvrdss reasgslsfl
     1381 rkamkyedlq hvlchlnisi ppctkgsgsd errrtltpls lrerysilse tsfgslsstd
     1441 kadqkmvdia eqlglswael arelqfgvdd inrirvenpn slleqsiall nlwasregkd
     1501 vkienlytal rnidrseivn mlegsgrqsr slkgswrytd rdyslspsqm ngyaslqdel
     1561 lspaslhytl psplradqyw nevaimdaip maateqdalm emsdmqvwss gltpslvtae
     1621 dsslecskae dsdatsegrf pgqlladahg pdhmgsmdlv eddtvdsdam nglidlleqe
     1681 egqrpegkmp sgdhqpgtge qdpesevsfv svqekvqtri mtsptfshdv eksadrlrdw
     1741 naegsfiscl qdltagswqe gvtrrllpth ttasgaqgqq qeqvlvpate lmrissaeds
     1801 dwqpqhptgg wqeeadsrff gqgnealhlp geqvteeqft ddqgniitkk iirkvvrqlg
     1861 pgdmgdrqeq eelilegslq epqdleaeed hfmkysilhr dglgakeevr vrvpkpevsg
     1921 grmgaqivkr aslkrgkq
//
LOCUS       XP_041333874            1933 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041333874
VERSION     XP_041333874.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477940.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1933
                     /product="ankyrin-1 isoform X2"
                     /calculated_mol_wt=211847
     Region          8..341
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          13..41
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          43..74
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          77..107
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(78,82..83,86..88,90..91,95,98,107,109,111,115..116,
                     119..121,123..124,128,131,140,142,144,148..149,152..154,
                     156..157,161,164)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          109..140
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          112..163
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          142..166
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          175..202
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          205..235
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          218..506
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          237..268
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          270..301
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          303..334
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          339..367
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(342..343,346..348,350..351,355,358,367,369,371,
                     375..376,379..381,383..384,388,391,400,402,404,408..409,
                     412..414,416..417,421,424,433)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          369..400
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          383..671
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          402..433
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          435..466
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          468..497
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          502..532
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(503,507..508,511..513,515..516,520,523,532,534,536,
                     540..541,544..546,548..549,553,556,565,567,569,573..574,
                     577..579,581..582,586,589)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          534..565
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          567..595
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          570..>779
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          600..630
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          633..664
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(666,668,672..673,676..678,680..681,685,688,697,699,
                     701,705..706,709..711,713..714,718,721,730,732,734,
                     738..739,742..744,746..747,751,754)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          666..697
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          699..730
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          732..760
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          943..1047
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1268..1397
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1435..1518
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1933
                     /gene="ANK1"
                     /coded_by="XM_041477940.1:128..5929"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 mtcmhylrad aatsflraar sgnldkaldh lrngvdintc nqnglnalhl askeghvkmv
       61 vellhkeivl etttkkgnta lhiaalagqq dvvrelvnyg anvnaqsqkg ftplymaaqe
      121 nhlevvkfll enganqnvat edgftplava lqqghenvva hlinygtkgk vrlpalhiaa
      181 rnddtrtaav llqndpnadv lsktgftplh iaahyenlsv aqlllnrgas vnftpqngit
      241 plhiasrrgn iimvrllldr gaqietrtkd eltplhcaar nghvriaeil ldhgapiqak
      301 tknglspihm aaqgdhldcv rlllqysadi dditldhltp lhvaahcghh rvakllvekg
      361 akpnsralng ftplhiackk nhirvmelll ktgasidavt esgltplhva afmghlpivk
      421 tllqrgaspn vsnvkvetpl hmaaraghtd vakyllqnka kanakakddq tplhcaarig
      481 htgmvkllle nnanpnlatt aghtplhita reghmdtala llekgasqtc mtkkgftplh
      541 vaakygkvdv aelllahdah pnaagknglt plhvavhhnn leivrlllpk gssphnsawn
      601 gytplhiaak qnqmevassl lqygasanae smqgvtplhl asqeghadmv allfskqang
      661 nlgnksgltp lhlvaqeghv lvadvlvkhg vtvdavtrmg ytplhvashy gniklvkfll
      721 qhqadvnakt klgytplhqa aqqghtdvvt lllkhgaspn eistngttpl aiakrlgyis
      781 vtdvlkivte eidipsvgdk hrmsfpetvd eildvsedeg tahvtvmeee liapkpktpd
      841 lreqegkrei lefmttttle qtvespavlq vpcippetvv traeeteqvg pveteaeqvs
      901 llhapsvspq epskefdeds lipsspatet sdnispvasp vhtgflvsfm vdarggsmrg
      961 srhhglrvvi ppracaaptr itcrlvkpqk lpappplaee eglgsriial gpagaqflsp
     1021 viveiphfas ygrgdrelvv lrsengsvwk ehrnryeesy mdqllngmde elesqeeldk
     1081 krvcriittd fplyfvvmsr icqdcdmigp eggclkstlv pmvqatfpdt avtkrvrlal
     1141 qaqpvpdelv tkllgnqatf spivtveprr rkfhrpiglr iplppswkdn prdsgegdtt
     1201 slrllcsvig gtaqaqwedi tgttklvyen ecanfttnvs arfwladcpr taeavhfatm
     1261 lykeltavpy makfvvfakm ndaregrlrc ycmtddkvdk tleqhenfte varsrdievv
     1321 egmplhvels gnlvpvkkaa qprtflfqsf renrlvipik vrdssreasg slsflrkamk
     1381 yedlqhvlch lnisippctk gsgsderrrt ltplslrery silsetsfgs lsstdkadqk
     1441 mvdiaeqlgl swaelarelq fgvddinrir venpnslleq siallnlwas regkdvkien
     1501 lytalrnidr seivnmlegs grqsrslkgs wrytdrdysl spsqmngyas lqdellspas
     1561 lhytlpsplr adqywnevai mdaipmaate qdalmemsdm qvwssgltps lvtaedssle
     1621 cskaedsdat segrfpgqll adahgpdhmg smdlveddtv dsdamnglid lleqeegqrp
     1681 egkmpsgdhq pgtgeqdpes evsfvsvqek vqtrimtspt fshdveksad rlrdwnaegs
     1741 fisclqdlta gswqegvtrr llpthttasg aqgqqqeqvl vpatelmris saedsdwqpq
     1801 hptggwqeea dsrffgqgne alhlpgeqvt eeqftddqgn iitkkiirkv vrqlgpgdmg
     1861 drqeqeelil egslqepqdl eaeedhfmky silhrdglga keevrvrvpk pevsggrmga
     1921 qivkraslkr gkq
//
LOCUS       XP_041333882            1930 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041333882
VERSION     XP_041333882.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477948.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1930
                     /product="ankyrin-1 isoform X3"
                     /calculated_mol_wt=211312
     Region          2..346
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          18..46
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          48..79
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(83,87..88,91..93,95..96,100,103,112,114,116,
                     120..121,124..126,128..129,133,136,145,147,149,153..154,
                     157..159,161..162,166,169)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          114..145
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          117..168
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          147..171
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          180..207
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          210..240
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          223..511
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          242..273
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          275..306
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          308..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          344..372
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(347..348,351..353,355..356,360,363,372,374,376,
                     380..381,384..386,388..389,393,396,405,407,409,413..414,
                     417..419,421..422,426,429,438)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          374..405
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          388..676
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          407..438
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          440..471
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          473..502
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          507..537
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(508,512..513,516..518,520..521,525,528,537,539,541,
                     545..546,549..551,553..554,558,561,570,572,574,578..579,
                     582..584,586..587,591,594)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          539..570
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          572..600
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          575..>784
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          605..635
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          638..669
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(671,673,677..678,681..683,685..686,690,693,702,704,
                     706,710..711,714..716,718..719,723,726,735,737,739,
                     743..744,747..749,751..752,756,759)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          671..702
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          704..735
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          737..765
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          940..1044
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1265..1394
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1432..1515
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1930
                     /gene="ANK1"
                     /coded_by="XM_041477948.1:16..5808"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 maarkgrsgp dvaadaatsf lraarsgnld kaldhlrngv dintcnqngl nalhlaskeg
       61 hvkmvvellh keivletttk kgntalhiaa lagqqdvvre lvnyganvna qsqkgftply
      121 maaqenhlev vkfllengan qnvatedgft plavalqqgh envvahliny gtkgkvrlpa
      181 lhiaarnddt rtaavllqnd pnadvlsktg ftplhiaahy enlsvaqlll nrgasvnftp
      241 qngitplhia srrgniimvr llldrgaqie trtkdeltpl hcaarnghvr iaeilldhga
      301 piqaktkngl spihmaaqgd hldcvrlllq ysadidditl dhltplhvaa hcghhrvakl
      361 lvekgakpns ralngftplh iackknhirv melllktgas idavtesglt plhvaafmgh
      421 lpivktllqr gaspnvsnvk vetplhmaar aghtdvakyl lqnkakanak akddqtplhc
      481 aarightgmv klllennanp nlattaghtp lhitareghm dtalallekg asqtcmtkkg
      541 ftplhvaaky gkvdvaelll ahdahpnaag kngltplhva vhhnnleivr lllpkgssph
      601 nsawngytpl hiaakqnqme vassllqyga sanaesmqgv tplhlasqeg hadmvallfs
      661 kqangnlgnk sgltplhlva qeghvlvadv lvkhgvtvda vtrmgytplh vashygnikl
      721 vkfllqhqad vnaktklgyt plhqaaqqgh tdvvtlllkh gaspneistn gttplaiakr
      781 lgyisvtdvl kivteeidip svgdkhrmsf petvdeildv sedeeeelia pkpktpdlre
      841 qegkreilef mttttleqtv espavlqvpc ippetvvtra eeteqvgpve teaeqvsllh
      901 apsvspqeps kefdedslip sspatetsdn ispvaspvht gflvsfmvda rggsmrgsrh
      961 hglrvvippr acaaptritc rlvkpqklpa ppplaeeegl gsriialgpa gaqflspviv
     1021 eiphfasygr gdrelvvlrs engsvwkehr nryeesymdq llngmdeele sqeeldkkrv
     1081 criittdfpl yfvvmsricq dcdmigpegg clkstlvpmv qatfpdtavt krvrlalqaq
     1141 pvpdelvtkl lgnqatfspi vtveprrrkf hrpiglripl ppswkdnprd sgegdttslr
     1201 llcsviggta qaqweditgt tklvyeneca nfttnvsarf wladcprtae avhfatmlyk
     1261 eltavpymak fvvfakmnda regrlrcycm tddkvdktle qhenftevar srdievvegm
     1321 plhvelsgnl vpvkkaaqpr tflfqsfren rlvipikvrd ssreasgsls flrkamkyed
     1381 lqhvlchlni sippctkgsg sderrrtltp lslrerysil setsfgslss tdkadqkmvd
     1441 iaeqlglswa elarelqfgv ddinrirven pnslleqsia llnlwasreg kdvkienlyt
     1501 alrnidrsei vnmlegsgrq srslkgswry tdrdyslsps qmngyaslqd ellspaslhy
     1561 tlpsplradq ywnevaimda ipmaateqda lmemsdmqvw ssgltpslvt aedsslecsk
     1621 aedsdatseg rfpgqllada hgpdhmgsmd lveddtvdsd amnglidlle qeegqrpegk
     1681 mpsgdhqpgt geqdpesevs fvsvqekvqt rimtsptfsh dveksadrlr dwnaegsfis
     1741 clqdltagsw qegvtrrllp thttasgaqg qqqeqvlvpa telmrissae dsdwqpqhpt
     1801 ggwqeeadsr ffgqgnealh lpgeqvteeq ftddqgniit kkiirkvvrq lgpgdmgdrq
     1861 eqeelilegs lqepqdleae edhfmkysil hrdglgakee vrvrvpkpev sggrmgaqiv
     1921 kraslkrgkq
//
LOCUS       XP_041333890            1929 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041333890
VERSION     XP_041333890.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477956.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1929
                     /product="ankyrin-1 isoform X4"
                     /calculated_mol_wt=211329
     Region          5..337
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          9..37
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          39..70
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          73..103
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(74,78..79,82..84,86..87,91,94,103,105,107,111..112,
                     115..117,119..120,124,127,136,138,140,144..145,148..150,
                     152..153,157,160)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          105..136
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          108..159
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          138..162
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          171..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          201..231
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          214..502
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          233..264
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          266..297
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          299..330
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..363
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(338..339,342..344,346..347,351,354,363,365,367,
                     371..372,375..377,379..380,384,387,396,398,400,404..405,
                     408..410,412..413,417,420,429)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          365..396
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          379..667
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          398..429
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          431..462
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          464..493
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          498..528
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(499,503..504,507..509,511..512,516,519,528,530,532,
                     536..537,540..542,544..545,549,552,561,563,565,569..570,
                     573..575,577..578,582,585)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          530..561
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          563..591
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          566..>775
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          596..626
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          629..660
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(662,664,668..669,672..674,676..677,681,684,693,695,
                     697,701..702,705..707,709..710,714,717,726,728,730,
                     734..735,738..740,742..743,747,750)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          662..693
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          695..726
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          728..756
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          939..1043
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1264..1393
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1431..1514
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1929
                     /gene="ANK1"
                     /coded_by="XM_041477956.1:16..5805"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 mwaeadaats flraarsgnl dkaldhlrng vdintcnqng lnalhlaske ghvkmvvell
       61 hkeivlettt kkgntalhia alagqqdvvr elvnyganvn aqsqkgftpl ymaaqenhle
      121 vvkfllenga nqnvatedgf tplavalqqg henvvahlin ygtkgkvrlp alhiaarndd
      181 trtaavllqn dpnadvlskt gftplhiaah yenlsvaqll lnrgasvnft pqngitplhi
      241 asrrgniimv rllldrgaqi etrtkdeltp lhcaarnghv riaeilldhg apiqaktkng
      301 lspihmaaqg dhldcvrlll qysadiddit ldhltplhva ahcghhrvak llvekgakpn
      361 sralngftpl hiackknhir vmelllktga sidavtesgl tplhvaafmg hlpivktllq
      421 rgaspnvsnv kvetplhmaa raghtdvaky llqnkakana kakddqtplh caarightgm
      481 vklllennan pnlattaght plhitaregh mdtalallek gasqtcmtkk gftplhvaak
      541 ygkvdvaell lahdahpnaa gkngltplhv avhhnnleiv rlllpkgssp hnsawngytp
      601 lhiaakqnqm evassllqyg asanaesmqg vtplhlasqe ghadmvallf skqangnlgn
      661 ksgltplhlv aqeghvlvad vlvkhgvtvd avtrmgytpl hvashygnik lvkfllqhqa
      721 dvnaktklgy tplhqaaqqg htdvvtlllk hgaspneist ngttplaiak rlgyisvtdv
      781 lkivteeidi psvgdkhrms fpetvdeild vsedegtahv tvmeeeliap kpktpdlreq
      841 egkreilefm ttttleqtve spavlqvpci ppetvvtrae eteqvgpvet eaeqvsllha
      901 psvspqepsk efdedslips spatetsdni spvaspvhtg flvsfmvdar ggsmrgsrhh
      961 glrvvippra caaptritcr lvkpqklpap pplaeeeglg sriialgpag aqflspvive
     1021 iphfasygrg drelvvlrse ngsvwkehrn ryeesymdql lngmdeeles qeeldkkrvc
     1081 riittdfply fvvmsricqd cdmigpeggc lkstlvpmvq atfpdtavtk rvrlalqaqp
     1141 vpdelvtkll gnqatfspiv tveprrrkfh rpiglriplp pswkdnprds gegdttslrl
     1201 lcsviggtaq aqweditgtt klvyenecan fttnvsarfw ladcprtaea vhfatmlyke
     1261 ltavpymakf vvfakmndar egrlrcycmt ddkvdktleq henftevars rdievvegmp
     1321 lhvelsgnlv pvkkaaqprt flfqsfrenr lvipikvrds sreasgslsf lrkamkyedl
     1381 qhvlchlnis ippctkgsgs derrrtltpl slrerysils etsfgslsst dkadqkmvdi
     1441 aeqlglswae larelqfgvd dinrirvenp nslleqsial lnlwasregk dvkienlyta
     1501 lrnidrseiv nmlegsgrqs rslkgswryt drdyslspsq mngyaslqde llspaslhyt
     1561 lpsplradqy wnevaimdai pmaateqdal memsdmqvws sgltpslvta edsslecska
     1621 edsdatsegr fpgqlladah gpdhmgsmdl veddtvdsda mnglidlleq eegqrpegkm
     1681 psgdhqpgtg eqdpesevsf vsvqekvqtr imtsptfshd veksadrlrd wnaegsfisc
     1741 lqdltagswq egvtrrllpt httasgaqgq qqeqvlvpat elmrissaed sdwqpqhptg
     1801 gwqeeadsrf fgqgnealhl pgeqvteeqf tddqgniitk kiirkvvrql gpgdmgdrqe
     1861 qeelilegsl qepqdleaee dhfmkysilh rdglgakeev rvrvpkpevs ggrmgaqivk
     1921 raslkrgkq
//
LOCUS       XP_041333899            1914 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041333899
VERSION     XP_041333899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1914
                     /product="ankyrin-1 isoform X5"
                     /calculated_mol_wt=209488
     Region          2..346
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          18..46
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          48..79
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(83,87..88,91..93,95..96,100,103,112,114,116,
                     120..121,124..126,128..129,133,136,145,147,149,153..154,
                     157..159,161..162,166,169)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          114..145
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          117..168
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          147..171
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          180..207
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          210..240
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          223..511
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          242..273
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          275..306
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          308..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          344..372
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(347..348,351..353,355..356,360,363,372,374,376,
                     380..381,384..386,388..389,393,396,405,407,409,413..414,
                     417..419,421..422,426,429,438)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          374..405
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          388..676
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          407..438
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          440..471
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          473..502
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          507..537
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(508,512..513,516..518,520..521,525,528,537,539,541,
                     545..546,549..551,553..554,558,561,570,572,574,578..579,
                     582..584,586..587,591,594)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          539..570
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          572..600
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          575..>784
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          605..635
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          638..669
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(671,673,677..678,681..683,685..686,690,693,702,704,
                     706,710..711,714..716,718..719,723,726,735,737,739,
                     743..744,747..749,751..752,756,759)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          671..702
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          704..735
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          737..765
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          948..1052
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1273..1402
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1440..1523
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1914
                     /gene="ANK1"
                     /coded_by="XM_041477965.1:16..5760"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 maarkgrsgp dvaadaatsf lraarsgnld kaldhlrngv dintcnqngl nalhlaskeg
       61 hvkmvvellh keivletttk kgntalhiaa lagqqdvvre lvnyganvna qsqkgftply
      121 maaqenhlev vkfllengan qnvatedgft plavalqqgh envvahliny gtkgkvrlpa
      181 lhiaarnddt rtaavllqnd pnadvlsktg ftplhiaahy enlsvaqlll nrgasvnftp
      241 qngitplhia srrgniimvr llldrgaqie trtkdeltpl hcaarnghvr iaeilldhga
      301 piqaktkngl spihmaaqgd hldcvrlllq ysadidditl dhltplhvaa hcghhrvakl
      361 lvekgakpns ralngftplh iackknhirv melllktgas idavtesglt plhvaafmgh
      421 lpivktllqr gaspnvsnvk vetplhmaar aghtdvakyl lqnkakanak akddqtplhc
      481 aarightgmv klllennanp nlattaghtp lhitareghm dtalallekg asqtcmtkkg
      541 ftplhvaaky gkvdvaelll ahdahpnaag kngltplhva vhhnnleivr lllpkgssph
      601 nsawngytpl hiaakqnqme vassllqyga sanaesmqgv tplhlasqeg hadmvallfs
      661 kqangnlgnk sgltplhlva qeghvlvadv lvkhgvtvda vtrmgytplh vashygnikl
      721 vkfllqhqad vnaktklgyt plhqaaqqgh tdvvtlllkh gaspneistn gttplaiakr
      781 lgyisvtdvl kivteeidip svgdkhrmsf petvdeildv sedegtahvt vmeeeliapk
      841 pktpdlreqe gkreilefmt tttleqtves pavlqvpcip petvvtraee teqvgpvete
      901 aeqvsllhap svspqepske fdedslipss patetsdnis pvaspvhtgf lvsfmvdarg
      961 gsmrgsrhhg lrvvipprac aaptritcrl vkpqklpapp plaeeeglgs riialgpaga
     1021 qflspvivei phfasygrgd relvvlrsen gsvwkehrnr yeesymdqll ngmdeelesq
     1081 eeldkkrvcr iittdfplyf vvmsricqdc dmigpeggcl kstlvpmvqa tfpdtavtkr
     1141 vrlalqaqpv pdelvtkllg nqatfspivt veprrrkfhr piglriplpp swkdnprdsg
     1201 egdttslrll csviggtaqa qweditgttk lvyenecanf ttnvsarfwl adcprtaeav
     1261 hfatmlykel tavpymakfv vfakmndare grlrcycmtd dkvdktleqh enftevarsr
     1321 dievvegmpl hvelsgnlvp vkkaaqprtf lfqsfrenrl vipikvrdss reasgslsfl
     1381 rkamkyedlq hvlchlnisi ppctkgsgsd errrtltpls lrerysilse tsfgslsstd
     1441 kadqkmvdia eqlglswael arelqfgvdd inrirvenpn slleqsiall nlwasregkd
     1501 vkienlytal rnidrseivn mlegsgrqsr slkgswrytd rdyslspsqm ngyaslqdel
     1561 lspaslhytl psplradqyw nevaimdaip maateqdalm emsdmqvwss gltpslvtae
     1621 dsslecskae dsdatsegrf pgqlladahg pdhmgsmdlv eddtvdsdam nglidlleqe
     1681 egqrpegkmp sgdhqpgtge qdpesevsfv svqekvqtri mtsptfshdv eksadrlrdw
     1741 naegsfiscl qdltagswqe gvtrrllpth ttasgaqgqq qeqvlvpate lmrissaeds
     1801 dwqpqhptgg wqeeadsrff gqgnealhlp geqvteeqft ddqgniitkk iirkvvrqlg
     1861 pgdmgdrqeq eelilegslq epqdleaeed hfmkysilhr dglgakdrts tpnh
//
LOCUS       XP_041333906            1899 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041333906
VERSION     XP_041333906.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477972.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1899
                     /product="ankyrin-1 isoform X6"
                     /calculated_mol_wt=208236
     Region          <8..175
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          9..40
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          43..73
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(44,48..49,52..54,56..57,61,64,73,75,77,81..82,
                     85..87,89..90,94,97,106,108,110,114..115,118..120,
                     122..123,127,130)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          75..106
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          108..132
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          141..168
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          171..201
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          184..472
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          203..234
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          236..267
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          269..300
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          305..333
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(308..309,312..314,316..317,321,324,333,335,337,
                     341..342,345..347,349..350,354,357,366,368,370,374..375,
                     378..380,382..383,387,390,399)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          349..637
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          368..399
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          401..432
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          434..463
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          468..498
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(469,473..474,477..479,481..482,486,489,498,500,502,
                     506..507,510..512,514..515,519,522,531,533,535,539..540,
                     543..545,547..548,552,555)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          500..531
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          533..561
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          536..>745
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          566..596
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          599..630
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(632,634,638..639,642..644,646..647,651,654,663,665,
                     667,671..672,675..677,679..680,684,687,696,698,700,
                     704..705,708..710,712..713,717,720)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          632..663
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          665..696
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          698..726
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          909..1013
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1234..1363
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1401..1484
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1899
                     /gene="ANK1"
                     /coded_by="XM_041477972.1:7..5706"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 mtcmhylrng lnalhlaske ghvkmvvell hkeivlettt kkgntalhia alagqqdvvr
       61 elvnyganvn aqsqkgftpl ymaaqenhle vvkfllenga nqnvatedgf tplavalqqg
      121 henvvahlin ygtkgkvrlp alhiaarndd trtaavllqn dpnadvlskt gftplhiaah
      181 yenlsvaqll lnrgasvnft pqngitplhi asrrgniimv rllldrgaqi etrtkdeltp
      241 lhcaarnghv riaeilldhg apiqaktkng lspihmaaqg dhldcvrlll qysadiddit
      301 ldhltplhva ahcghhrvak llvekgakpn sralngftpl hiackknhir vmelllktga
      361 sidavtesgl tplhvaafmg hlpivktllq rgaspnvsnv kvetplhmaa raghtdvaky
      421 llqnkakana kakddqtplh caarightgm vklllennan pnlattaght plhitaregh
      481 mdtalallek gasqtcmtkk gftplhvaak ygkvdvaell lahdahpnaa gkngltplhv
      541 avhhnnleiv rlllpkgssp hnsawngytp lhiaakqnqm evassllqyg asanaesmqg
      601 vtplhlasqe ghadmvallf skqangnlgn ksgltplhlv aqeghvlvad vlvkhgvtvd
      661 avtrmgytpl hvashygnik lvkfllqhqa dvnaktklgy tplhqaaqqg htdvvtlllk
      721 hgaspneist ngttplaiak rlgyisvtdv lkivteeidi psvgdkhrms fpetvdeild
      781 vsedegtahv tvmeeeliap kpktpdlreq egkreilefm ttttleqtve spavlqvpci
      841 ppetvvtrae eteqvgpvet eaeqvsllha psvspqepsk efdedslips spatetsdni
      901 spvaspvhtg flvsfmvdar ggsmrgsrhh glrvvippra caaptritcr lvkpqklpap
      961 pplaeeeglg sriialgpag aqflspvive iphfasygrg drelvvlrse ngsvwkehrn
     1021 ryeesymdql lngmdeeles qeeldkkrvc riittdfply fvvmsricqd cdmigpeggc
     1081 lkstlvpmvq atfpdtavtk rvrlalqaqp vpdelvtkll gnqatfspiv tveprrrkfh
     1141 rpiglriplp pswkdnprds gegdttslrl lcsviggtaq aqweditgtt klvyenecan
     1201 fttnvsarfw ladcprtaea vhfatmlyke ltavpymakf vvfakmndar egrlrcycmt
     1261 ddkvdktleq henftevars rdievvegmp lhvelsgnlv pvkkaaqprt flfqsfrenr
     1321 lvipikvrds sreasgslsf lrkamkyedl qhvlchlnis ippctkgsgs derrrtltpl
     1381 slrerysils etsfgslsst dkadqkmvdi aeqlglswae larelqfgvd dinrirvenp
     1441 nslleqsial lnlwasregk dvkienlyta lrnidrseiv nmlegsgrqs rslkgswryt
     1501 drdyslspsq mngyaslqde llspaslhyt lpsplradqy wnevaimdai pmaateqdal
     1561 memsdmqvws sgltpslvta edsslecska edsdatsegr fpgqlladah gpdhmgsmdl
     1621 veddtvdsda mnglidlleq eegqrpegkm psgdhqpgtg eqdpesevsf vsvqekvqtr
     1681 imtsptfshd veksadrlrd wnaegsfisc lqdltagswq egvtrrllpt httasgaqgq
     1741 qqeqvlvpat elmrissaed sdwqpqhptg gwqeeadsrf fgqgnealhl pgeqvteeqf
     1801 tddqgniitk kiirkvvrql gpgdmgdrqe qeelilegsl qepqdleaee dhfmkysilh
     1861 rdglgakeev rvrvpkpevs ggrmgaqivk raslkrgkq
//
LOCUS       XP_041333915            1875 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041333915
VERSION     XP_041333915.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477981.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1875
                     /product="ankyrin-1 isoform X7"
                     /calculated_mol_wt=205530
     Region          5..>279
                     /region_name="PHA03095"
                     /note="ankyrin-like protein; Provisional"
                     /db_xref="CDD:222980"
     Region          19..49
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(20,24..25,28..30,32..33,37,40,49,51,53,57..58,
                     61..63,65..66,70,73,82,84,86,90..91,94..96,98..99,103,106)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          51..82
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          84..108
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          117..144
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          147..177
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          160..448
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          179..210
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          212..243
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          245..276
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          281..309
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(284..285,288..290,292..293,297,300,309,311,313,
                     317..318,321..323,325..326,330,333,342,344,346,350..351,
                     354..356,358..359,363,366,375)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          311..342
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          325..613
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          344..375
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          377..408
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          410..439
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          444..474
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(445,449..450,453..455,457..458,462,465,474,476,478,
                     482..483,486..488,490..491,495,498,507,509,511,515..516,
                     519..521,523..524,528,531)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          476..507
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          509..537
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          512..>721
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          542..572
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          575..606
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(608,610,614..615,618..620,622..623,627,630,639,641,
                     643,647..648,651..653,655..656,660,663,672,674,676,
                     680..681,684..686,688..689,693,696)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          608..639
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          641..672
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          674..702
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          885..989
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1210..1339
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1377..1460
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1875
                     /gene="ANK1"
                     /coded_by="XM_041477981.1:191..5818"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 mvvellhkei vletttkkgn talhiaalag qqdvvrelvn yganvnaqsq kgftplymaa
       61 qenhlevvkf llenganqnv atedgftpla valqqghenv vahlinygtk gkvrlpalhi
      121 aarnddtrta avllqndpna dvlsktgftp lhiaahyenl svaqlllnrg asvnftpqng
      181 itplhiasrr gniimvrlll drgaqietrt kdeltplhca arnghvriae illdhgapiq
      241 aktknglspi hmaaqgdhld cvrlllqysa didditldhl tplhvaahcg hhrvakllve
      301 kgakpnsral ngftplhiac kknhirvmel llktgasida vtesgltplh vaafmghlpi
      361 vktllqrgas pnvsnvkvet plhmaaragh tdvakyllqn kakanakakd dqtplhcaar
      421 ightgmvkll lennanpnla ttaghtplhi tareghmdta lallekgasq tcmtkkgftp
      481 lhvaakygkv dvaelllahd ahpnaagkng ltplhvavhh nnleivrlll pkgssphnsa
      541 wngytplhia akqnqmevas sllqygasan aesmqgvtpl hlasqeghad mvallfskqa
      601 ngnlgnksgl tplhlvaqeg hvlvadvlvk hgvtvdavtr mgytplhvas hygniklvkf
      661 llqhqadvna ktklgytplh qaaqqghtdv vtlllkhgas pneistngtt plaiakrlgy
      721 isvtdvlkiv teeidipsvg dkhrmsfpet vdeildvsed egtahvtvme eeliapkpkt
      781 pdlreqegkr eilefmtttt leqtvespav lqvpcippet vvtraeeteq vgpveteaeq
      841 vsllhapsvs pqepskefde dslipsspat etsdnispva spvhtgflvs fmvdarggsm
      901 rgsrhhglrv vippracaap tritcrlvkp qklpapppla eeeglgsrii algpagaqfl
      961 spviveiphf asygrgdrel vvlrsengsv wkehrnryee symdqllngm deelesqeel
     1021 dkkrvcriit tdfplyfvvm sricqdcdmi gpeggclkst lvpmvqatfp dtavtkrvrl
     1081 alqaqpvpde lvtkllgnqa tfspivtvep rrrkfhrpig lriplppswk dnprdsgegd
     1141 ttslrllcsv iggtaqaqwe ditgttklvy enecanfttn vsarfwladc prtaeavhfa
     1201 tmlykeltav pymakfvvfa kmndaregrl rcycmtddkv dktleqhenf tevarsrdie
     1261 vvegmplhve lsgnlvpvkk aaqprtflfq sfrenrlvip ikvrdssrea sgslsflrka
     1321 mkyedlqhvl chlnisippc tkgsgsderr rtltplslre rysilsetsf gslsstdkad
     1381 qkmvdiaeql glswaelare lqfgvddinr irvenpnsll eqsiallnlw asregkdvki
     1441 enlytalrni drseivnmle gsgrqsrslk gswrytdrdy slspsqmngy aslqdellsp
     1501 aslhytlpsp lradqywnev aimdaipmaa teqdalmems dmqvwssglt pslvtaedss
     1561 lecskaedsd atsegrfpgq lladahgpdh mgsmdlvedd tvdsdamngl idlleqeegq
     1621 rpegkmpsgd hqpgtgeqdp esevsfvsvq ekvqtrimts ptfshdveks adrlrdwnae
     1681 gsfisclqdl tagswqegvt rrllpthtta sgaqgqqqeq vlvpatelmr issaedsdwq
     1741 pqhptggwqe eadsrffgqg nealhlpgeq vteeqftddq gniitkkiir kvvrqlgpgd
     1801 mgdrqeqeel ilegslqepq dleaeedhfm kysilhrdgl gakeevrvrv pkpevsggrm
     1861 gaqivkrasl krgkq
//
LOCUS       XP_041333922            1737 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041333922
VERSION     XP_041333922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477988.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1737
                     /product="ankyrin-1 isoform X8"
                     /calculated_mol_wt=189644
     Region          2..310
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          18..46
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          48..79
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          82..112
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(83,87..88,91..93,95..96,100,103,112,114,116,
                     120..121,124..126,128..129,133,136,145,147,149,153..154,
                     157..159,161..162,166,169)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          114..145
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          147..171
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          180..207
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          210..240
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          223..511
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          242..273
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          275..306
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          308..339
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          344..372
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(347..348,351..353,355..356,360,363,372,374,376,
                     380..381,384..386,388..389,393,396,405,407,409,413..414,
                     417..419,421..422,426,429,438)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          374..405
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          388..676
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          407..438
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          440..471
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          473..502
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          507..537
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(508,512..513,516..518,520..521,525,528,537,539,541,
                     545..546,549..551,553..554,558,561,570,572,574,578..579,
                     582..584,586..587,591,594)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          539..570
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          572..600
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          575..>784
                     /region_name="PHA03100"
                     /note="ankyrin repeat protein; Provisional; cl39094"
                     /db_xref="CDD:476869"
     Region          605..635
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          638..669
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(671,673,677..678,681..683,685..686,690,693,702,704,
                     706,710..711,714..716,718..719,723,726,735,737,739,
                     743..744,747..749,751..752,756,759)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          671..702
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          704..735
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          737..765
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          948..1052
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     Region          1273..1402
                     /region_name="UPA_2"
                     /note="UPA domain; pfam17809"
                     /db_xref="CDD:375346"
     Region          1440..1523
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..1737
                     /gene="ANK1"
                     /coded_by="XM_041477988.1:16..5229"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 maarkgrsgp dvaadaatsf lraarsgnld kaldhlrngv dintcnqngl nalhlaskeg
       61 hvkmvvellh keivletttk kgntalhiaa lagqqdvvre lvnyganvna qsqkgftply
      121 maaqenhlev vkfllengan qnvatedgft plavalqqgh envvahliny gtkgkvrlpa
      181 lhiaarnddt rtaavllqnd pnadvlsktg ftplhiaahy enlsvaqlll nrgasvnftp
      241 qngitplhia srrgniimvr llldrgaqie trtkdeltpl hcaarnghvr iaeilldhga
      301 piqaktkngl spihmaaqgd hldcvrlllq ysadidditl dhltplhvaa hcghhrvakl
      361 lvekgakpns ralngftplh iackknhirv melllktgas idavtesglt plhvaafmgh
      421 lpivktllqr gaspnvsnvk vetplhmaar aghtdvakyl lqnkakanak akddqtplhc
      481 aarightgmv klllennanp nlattaghtp lhitareghm dtalallekg asqtcmtkkg
      541 ftplhvaaky gkvdvaelll ahdahpnaag kngltplhva vhhnnleivr lllpkgssph
      601 nsawngytpl hiaakqnqme vassllqyga sanaesmqgv tplhlasqeg hadmvallfs
      661 kqangnlgnk sgltplhlva qeghvlvadv lvkhgvtvda vtrmgytplh vashygnikl
      721 vkfllqhqad vnaktklgyt plhqaaqqgh tdvvtlllkh gaspneistn gttplaiakr
      781 lgyisvtdvl kivteeidip svgdkhrmsf petvdeildv sedegtahvt vmeeeliapk
      841 pktpdlreqe gkreilefmt tttleqtves pavlqvpcip petvvtraee teqvgpvete
      901 aeqvsllhap svspqepske fdedslipss patetsdnis pvaspvhtgf lvsfmvdarg
      961 gsmrgsrhhg lrvvipprac aaptritcrl vkpqklpapp plaeeeglgs riialgpaga
     1021 qflspvivei phfasygrgd relvvlrsen gsvwkehrnr yeesymdqll ngmdeelesq
     1081 eeldkkrvcr iittdfplyf vvmsricqdc dmigpeggcl kstlvpmvqa tfpdtavtkr
     1141 vrlalqaqpv pdelvtkllg nqatfspivt veprrrkfhr piglriplpp swkdnprdsg
     1201 egdttslrll csviggtaqa qweditgttk lvyenecanf ttnvsarfwl adcprtaeav
     1261 hfatmlykel tavpymakfv vfakmndare grlrcycmtd dkvdktleqh enftevarsr
     1321 dievvegmpl hvelsgnlvp vkkaaqprtf lfqsfrenrl vipikvrdss reasgslsfl
     1381 rkamkyedlq hvlchlnisi ppctkgsgsd errrtltpls lrerysilse tsfgslsstd
     1441 kadqkmvdia eqlglswael arelqfgvdd inrirvenpn slleqsiall nlwasregkd
     1501 vkienlytal rnidrseivn mlegsgrqsr slkgswrytd rdyslspsqm ngyaslqdel
     1561 lspaslhytl psplradqyw nevaimdaip maateqdalm emsdmqvwss gltpslvtae
     1621 dsslecskae dsdatsegrf pgqlladahg pdhmgsmdlv eddtvdsdam nglidlleqe
     1681 egqrpegkmp sgdhqpgtge qdpesevsfv svqekvqtri mtsptfshdv eksadrt
//
LOCUS       XP_041333930             189 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041333930
VERSION     XP_041333930.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041477996.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..189
                     /product="ankyrin-1 isoform X9"
                     /calculated_mol_wt=21250
     CDS             1..189
                     /gene="ANK1"
                     /coded_by="XM_041477996.1:755..1324"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 mwaflaqlli alvllafflv scqnvmhivr gsvrfllkha hreldkelge sqgladdeea
       61 lsarvvrrrl llkgnealhl pgeqvteeqf tddqgniitk kiirkvvrql gpgdmgdrqe
      121 qeelilegsl qepqdleaee dhfmkysilh rdglgakeev rvrvpkpevs ggrmgaqivk
      181 raslkrgkq
//
LOCUS       XP_041333940             165 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin-1 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041333940
VERSION     XP_041333940.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478006.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="ankyrin-1 isoform X10"
                     /calculated_mol_wt=18629
     CDS             1..165
                     /gene="ANK1"
                     /coded_by="XM_041478006.1:755..1252"
                     /db_xref="GeneID:121359166"
ORIGIN      
        1 mwaflaqlli alvllafflv scqnvmhivr gsvrfllkha hreldkelge sqgladdeea
       61 lsarvvrrrl llkgnealhl pgeqvteeqf tddqgniitk kiirkvvrql gpgdmgdrqe
      121 qeelilegsl qepqdleaee dhfmkysilh rdglgakdrt stpnh
//
LOCUS       XP_041333949            1020 aa            linear   VRT 06-MAY-2021
DEFINITION  2-oxoglutarate dehydrogenase, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333949
VERSION     XP_041333949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478015.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1020
                     /product="2-oxoglutarate dehydrogenase, mitochondrial"
                     /calculated_mol_wt=115521
     Region          49..1013
                     /region_name="SucA"
                     /note="2-oxoglutarate dehydrogenase complex, dehydrogenase
                     (E1) component, and related enzymes [Energy production and
                     conversion]; COG0567"
                     /db_xref="CDD:440333"
     CDS             1..1020
                     /gene="OGDH"
                     /coded_by="XM_041478015.1:180..3242"
                     /db_xref="GeneID:121359215"
ORIGIN      
        1 mlnlrtcaak lrpltasqtv ktlsqhrpaa prtfqqlrcy sapvaaepfl sgtssnyvee
       61 myyawlenpk svhkswdiff rnanagaapg tayqsppplt tslstlsqaq slvqaqpnvd
      121 klvedhlavq slirayqirg hhvaqldplg ildadldssl padivtstdk lgfygldesd
      181 ldkvfhlptt tfiggnesal plreiirrle maycqhigve fmfindleqc qwirqkfetp
      241 gimqftneek rtllarlvrs trfeeflhrk wssekrfgle gcevlipalk tiidkssekg
      301 vdyvimgmph rgrlnvlanv irkeleqifc qfdskleaad egsgdvkyhl gmyhrrinrv
      361 tdrnitlslv anpshleaad pvvqgktkae qfycgdtegk kvmsillhgd aafagqgivy
      421 etfhlsdlps ytthgtvhvv vnnqigfttd prmarsspyp tdvarvvnap ifhvnaddpe
      481 avvyvcnvaa ewrstfhkdv vvdlvcyrrn ghnemdepmf tqplmykqir kqkpvlqkya
      541 ellisqgvvn qpeyeeeiak ydkiceeaha rskdekilhi khwldspwpg fftldgqprs
      601 mtcpstglne edlthigqva ssvpvedfti hgglsrilkt rgemvknrtv dwalaeymaf
      661 gsllkegihi rlsgqdverg tfshrhhvlh dqnvdkrtci pmnhlwpnqa pytvcnssls
      721 eygvlgfelg famaspnalv lweaqfgdfh ntaqciidqf icpgqakwvr qngivlllph
      781 gmegmgpehs sarperflqm cnddpdvfpk lddfdvrqly ecnwivvncs tpanffhvlr
      841 rqillpfrkp liiftpksll rhpearssfd dmlpgthflr vipdsgpaaq npeqvkrvlf
      901 ctgkvyydlt rerkarqmea dvaitrveql spfpfdllqq eaqkypaael vwcqeehknq
      961 gyydyvkprl rttinrakpv wyagrepaaa patgnkkthl telqrlldta fnldafkdla
//
LOCUS       XP_041333956            1020 aa            linear   VRT 06-MAY-2021
DEFINITION  2-oxoglutarate dehydrogenase, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333956
VERSION     XP_041333956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1020
                     /product="2-oxoglutarate dehydrogenase, mitochondrial"
                     /calculated_mol_wt=115521
     Region          49..1013
                     /region_name="SucA"
                     /note="2-oxoglutarate dehydrogenase complex, dehydrogenase
                     (E1) component, and related enzymes [Energy production and
                     conversion]; COG0567"
                     /db_xref="CDD:440333"
     CDS             1..1020
                     /gene="OGDH"
                     /coded_by="XM_041478022.1:138..3200"
                     /db_xref="GeneID:121359215"
ORIGIN      
        1 mlnlrtcaak lrpltasqtv ktlsqhrpaa prtfqqlrcy sapvaaepfl sgtssnyvee
       61 myyawlenpk svhkswdiff rnanagaapg tayqsppplt tslstlsqaq slvqaqpnvd
      121 klvedhlavq slirayqirg hhvaqldplg ildadldssl padivtstdk lgfygldesd
      181 ldkvfhlptt tfiggnesal plreiirrle maycqhigve fmfindleqc qwirqkfetp
      241 gimqftneek rtllarlvrs trfeeflhrk wssekrfgle gcevlipalk tiidkssekg
      301 vdyvimgmph rgrlnvlanv irkeleqifc qfdskleaad egsgdvkyhl gmyhrrinrv
      361 tdrnitlslv anpshleaad pvvqgktkae qfycgdtegk kvmsillhgd aafagqgivy
      421 etfhlsdlps ytthgtvhvv vnnqigfttd prmarsspyp tdvarvvnap ifhvnaddpe
      481 avvyvcnvaa ewrstfhkdv vvdlvcyrrn ghnemdepmf tqplmykqir kqkpvlqkya
      541 ellisqgvvn qpeyeeeiak ydkiceeaha rskdekilhi khwldspwpg fftldgqprs
      601 mtcpstglne edlthigqva ssvpvedfti hgglsrilkt rgemvknrtv dwalaeymaf
      661 gsllkegihi rlsgqdverg tfshrhhvlh dqnvdkrtci pmnhlwpnqa pytvcnssls
      721 eygvlgfelg famaspnalv lweaqfgdfh ntaqciidqf icpgqakwvr qngivlllph
      781 gmegmgpehs sarperflqm cnddpdvfpk lddfdvrqly ecnwivvncs tpanffhvlr
      841 rqillpfrkp liiftpksll rhpearssfd dmlpgthflr vipdsgpaaq npeqvkrvlf
      901 ctgkvyydlt rerkarqmea dvaitrveql spfpfdllqq eaqkypaael vwcqeehknq
      961 gyydyvkprl rttinrakpv wyagrepaaa patgnkkthl telqrlldta fnldafkdla
//
LOCUS       XP_041333966             899 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger MIZ domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041333966
VERSION     XP_041333966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..899
                     /product="zinc finger MIZ domain-containing protein 2"
                     /calculated_mol_wt=93986
     Region          <63..374
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <184..261
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          591..653
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(596,599,612,614,619,622,635,638)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..899
                     /gene="ZMIZ2"
                     /coded_by="XM_041478032.1:204..2903"
                     /db_xref="GeneID:121359228"
ORIGIN      
        1 mssmnpmkps lppaphgdgs fayeavpwqp stnqppgsls vvttvwgvsn psqsqvfgsp
       61 mgpggsssst pllpgmagts sgmssppflp qqpfaegapg kgyvqpsvyg rntypsgpgf
      121 aasynggpsg pggmglpsha sratadftqa aaaaavaaaa atatatatat vaalqekqsq
      181 elsqygamgt gqsfssqflp hagprgpnsm spagmagvva psgvspvsms pvrapgtgpl
      241 yggqrvpqht ypgppqsqql prqglkrays negyptqqyl qggqyaaaga qyapsapqss
      301 apspsypghr lqqsvgqyls asgsagpyyk padqfngqsa sfgtysqaai ngpgrslpgy
      361 pssplagnpt ppmtpgsgip ayaspgqdvk spfladmkps vapvhpspsg papgeelrlt
      421 fpvrdgvvle pfrlqhnlav snhvfqlrds vyktlmmrpd lelqfkcyhh edrqmntnwp
      481 asvqvsvnat pltiergdnk tshkplylkh vcqpgrntiq itvtacccsh lfvlqlvhrp
      541 svrsvlqgli kkrllpaehc itkikrnfss gtipgtpgpn gedgveqtai kvslkcpitf
      601 rriqlpargh dcrhiqcfdl esylqlncer gtwrcpvcnk talleglevd qymlgiliyi
      661 qnseheeiti dptcswkpvp vkpdvhikee pegpalkrcr tlspahmvlp nimemiaalg
      721 pgsvpfpals qppagaatdy gtpgssflgp ggfpepfaap gvpgpstlsd ftpgpssisy
      781 qpnipgslla pekppvpplp aqlppagrme pshpavqtgl hntpsgshpr savlrqppah
      841 aadlvfppap smaaagdgse aaldllpelt npdellsylg ppdlpsssnd dllslfenn
//
LOCUS       XP_041333980             856 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 9-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333980
VERSION     XP_041333980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..856
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..856
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 9-like"
                     /calculated_mol_wt=94355
     Region          50..171
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          218..410
                     /region_name="ZnMc_adamalysin_II_like"
                     /note="Zinc-dependent metalloprotease; adamalysin_II_like
                     subfamily. Adamalysin II is a snake venom zinc
                     endopeptidase. This subfamily contains other snake venom
                     metalloproteinases, as well as membrane-anchored
                     metalloproteases belonging to the ADAM family; cd04269"
                     /db_xref="CDD:239797"
     Site            order(353..354,357,363)
                     /site_type="active"
                     /db_xref="CDD:239797"
     Region          429..502
                     /region_name="Disintegrin"
                     /note="pfam00200"
                     /db_xref="CDD:459709"
     Region          506..642
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     Region          <741..>855
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..856
                     /gene="LOC121359236"
                     /coded_by="XM_041478046.1:93..2663"
                     /db_xref="GeneID:121359236"
ORIGIN      
        1 mwaggvmara wsclcrllif liflifllpp paapgqpagf qeislltsye vvtpqrlgre
       61 rreasnsssi qdkvsyaiei egkeytihle knkellpkdf tvytydkegk lqleypdvqd
      121 hchyqgfveg tldslvavst csglrglvti gnvtygiepm dpssgskhil yrldnvkkep
      181 tacgvttggq egehaegdlh psmtqllrrk ravlhqtryv elfivvdkek fedfgksete
      241 vrehmvqlan fldsmyvmln irivlvglei wkheniistd ggagdvlanf vqwreknlvl
      301 rrrhdsaqfv lkkgfggtag mayvgtvcsk shagginvfg risiqmfasi mahelghnlg
      361 mnhddervch cgasscimss gasgsrnfss csaedfeklt lnkggsclln vpkpdetysv
      421 pycgnklvda geecdcgspk ecesdpccep gtcrlrsgae caygdccknc qllpggtecr
      481 astnecdlpe ycngtsqfcq pdftvqnghp chnqeaycyn gvcqyydaqc qdifgskaka
      541 apnicfaevn skgdrfgncg fhghdykkcs swnamcgklq cenvkampvf gikpaiiqtp
      601 irgttcwgvd fqlgsdvpdp gmvnegtkcg ngkicrhfqc vsasvlnydc dvekqchghg
      661 vcnnnrnchc eagwappfcd skgyggsvds gppyndkdts lrdgllvfff lvlpllvaaa
      721 lafakrdrlk rscrrlmsrc hsslqspppr pdteprdyqq rgfsrgmpyp pravpmdmhp
      781 ntfpvpaypv nqhpqqafhq pyysppqypl qqaprvpsrp pppqqkvvpq gpppaqqkcl
      841 pqgqyfpsrp aplppk
//
LOCUS       XP_041333992             782 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041333992
VERSION     XP_041333992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..782
                     /product="transforming acidic coiled-coil-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=84481
     Region          19..>341
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          576..775
                     /region_name="TACC_C"
                     /note="Transforming acidic coiled-coil-containing protein
                     (TACC), C-terminal; pfam05010"
                     /db_xref="CDD:461517"
     CDS             1..782
                     /gene="TACC1"
                     /coded_by="XM_041478058.1:188..2536"
                     /db_xref="GeneID:121359242"
ORIGIN      
        1 mafsawqils pvqwarwtws avrgggspee gdggagaaee edeeedqepp aggsalgfss
       61 dstdnfetpe aetpscsplk efceppgppe peagtqeprg hgdllvgeph wdsspgkhsk
      121 deaqaeigap kasldakget dpdssplmqp laglgcqadp ahaagepapl phvgtapwer
      181 ampggdpgtg lvelgadvlg qeqlrkgktp slgrkadegt eetqrepeqh drsvspfvag
      241 vcqlqssapa apqrlphpge lggdpaleap gqvpkpgadc teakesveak pasprrgsri
      301 paskltpkrh respkkaaed aesgpteppp prgscqlgpt gwdspglssl sgssalqnsp
      361 vlpkgsyqfd pnnfdsmdpf kptktlasad adscstadns lneilesqtl emqddalkgr
      421 dspkkpksrl ittteqvkfl cfllsgckvk qheaqplvld isaqdegvli seipditnrd
      481 gratdeekla sttstqkptg lekkaeaedd leyfecsnvp vsagkhraea gfekeickqm
      541 ekggpgifpd npglcsmdkc psvgrsespl agiclsesek aavltliree iitkeieane
      601 wkkkyeesrq evlemrkiva eyektiaqmi edeqrtnmts qknlqqltme kdqaladlns
      661 verslsdlfr ryenlkgvle gfkkneealk kcaqdyltrv kqeeqryqal kvhaeekldk
      721 aneeiaqvrt kakaesaalh aglrkeqmkv eslertlqqk nqeieeltki cdeliaklgk
      781 sd
//
LOCUS       XP_041334000             782 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334000
VERSION     XP_041334000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..782
                     /product="transforming acidic coiled-coil-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=84481
     Region          19..>341
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          576..775
                     /region_name="TACC_C"
                     /note="Transforming acidic coiled-coil-containing protein
                     (TACC), C-terminal; pfam05010"
                     /db_xref="CDD:461517"
     CDS             1..782
                     /gene="TACC1"
                     /coded_by="XM_041478066.1:188..2536"
                     /db_xref="GeneID:121359242"
ORIGIN      
        1 mafsawqils pvqwarwtws avrgggspee gdggagaaee edeeedqepp aggsalgfss
       61 dstdnfetpe aetpscsplk efceppgppe peagtqeprg hgdllvgeph wdsspgkhsk
      121 deaqaeigap kasldakget dpdssplmqp laglgcqadp ahaagepapl phvgtapwer
      181 ampggdpgtg lvelgadvlg qeqlrkgktp slgrkadegt eetqrepeqh drsvspfvag
      241 vcqlqssapa apqrlphpge lggdpaleap gqvpkpgadc teakesveak pasprrgsri
      301 paskltpkrh respkkaaed aesgpteppp prgscqlgpt gwdspglssl sgssalqnsp
      361 vlpkgsyqfd pnnfdsmdpf kptktlasad adscstadns lneilesqtl emqddalkgr
      421 dspkkpksrl ittteqvkfl cfllsgckvk qheaqplvld isaqdegvli seipditnrd
      481 gratdeekla sttstqkptg lekkaeaedd leyfecsnvp vsagkhraea gfekeickqm
      541 ekggpgifpd npglcsmdkc psvgrsespl agiclsesek aavltliree iitkeieane
      601 wkkkyeesrq evlemrkiva eyektiaqmi edeqrtnmts qknlqqltme kdqaladlns
      661 verslsdlfr ryenlkgvle gfkkneealk kcaqdyltrv kqeeqryqal kvhaeekldk
      721 aneeiaqvrt kakaesaalh aglrkeqmkv eslertlqqk nqeieeltki cdeliaklgk
      781 sd
//
LOCUS       XP_041334010             770 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334010
VERSION     XP_041334010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="transforming acidic coiled-coil-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=83058
     Region          19..>341
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          564..763
                     /region_name="TACC_C"
                     /note="Transforming acidic coiled-coil-containing protein
                     (TACC), C-terminal; pfam05010"
                     /db_xref="CDD:461517"
     CDS             1..770
                     /gene="TACC1"
                     /coded_by="XM_041478076.1:184..2496"
                     /db_xref="GeneID:121359242"
ORIGIN      
        1 mafsawqils pvqwarwtws avrgggspee gdggagaaee edeeedqepp aggsalgfss
       61 dstdnfetpe aetpscsplk efceppgppe peagtqeprg hgdllvgeph wdsspgkhsk
      121 deaqaeigap kasldakget dpdssplmqp laglgcqadp ahaagepapl phvgtapwer
      181 ampggdpgtg lvelgadvlg qeqlrkgktp slgrkadegt eetqrepeqh drsvspfvag
      241 vcqlqssapa apqrlphpge lggdpaleap gqvpkpgadc teakesveak pasprrgsri
      301 paskltpkrh respkkaaed aesgpteppp prgscqlgpt gwdspglssl sgssalqnsp
      361 vlpkgsyqfd pnnfdsmdpf kptktlasad adscstadns lneilesqtl emqddalkgr
      421 dspkkpksrl itsgckvkqh eaqplvldis aqdegvlise ipditnrdgr atdeeklast
      481 tstqkptgle kkaeaeddle yfecsnvpvs agkhraeagf ekeickqmek ggpgifpdnp
      541 glcsmdkcps vgrsesplag iclsesekaa vltlireeii tkeieanewk kkyeesrqev
      601 lemrkivaey ektiaqmied eqrtnmtsqk nlqqltmekd qaladlnsve rslsdlfrry
      661 enlkgvlegf kkneealkkc aqdyltrvkq eeqryqalkv haeekldkan eeiaqvrtka
      721 kaesaalhag lrkeqmkves lertlqqknq eieeltkicd eliaklgksd
//
LOCUS       XP_041334018             635 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334018
VERSION     XP_041334018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..635
                     /product="transforming acidic coiled-coil-containing
                     protein 1 isoform X3"
                     /calculated_mol_wt=69143
     Region          <102..216
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          429..628
                     /region_name="TACC_C"
                     /note="Transforming acidic coiled-coil-containing protein
                     (TACC), C-terminal; pfam05010"
                     /db_xref="CDD:461517"
     CDS             1..635
                     /gene="TACC1"
                     /coded_by="XM_041478084.1:276..2183"
                     /db_xref="GeneID:121359242"
ORIGIN      
        1 mqplaglgcq adpahaagep aplphvgtap werampggdp gtglvelgad vlgqeqlrkg
       61 ktpslgrkad egteetqrep eqhdrsvspf vagvcqlqss apaapqrlph pgelggdpal
      121 eapgqvpkpg adcteakesv eakpasprrg sripaskltp krhrespkka aedaesgpte
      181 pppprgscql gptgwdspgl sslsgssalq nspvlpkgsy qfdpnnfdsm dpfkptktla
      241 sadadscsta dnslneiles qtlemqddal kgrdspkkpk srlittteqv kflcfllsgc
      301 kvkqheaqpl vldisaqdeg vliseipdit nrdgratdee klasttstqk ptglekkaea
      361 eddleyfecs nvpvsagkhr aeagfekeic kqmekggpgi fpdnpglcsm dkcpsvgrse
      421 splagiclse sekaavltli reeiitkeie anewkkkyee srqevlemrk ivaeyektia
      481 qmiedeqrtn mtsqknlqql tmekdqalad lnsverslsd lfrryenlkg vlegfkknee
      541 alkkcaqdyl trvkqeeqry qalkvhaeek ldkaneeiaq vrtkakaesa alhaglrkeq
      601 mkveslertl qqknqeieel tkicdeliak lgksd
//
LOCUS       XP_041334024             635 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334024
VERSION     XP_041334024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..635
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..635
                     /product="transforming acidic coiled-coil-containing
                     protein 1 isoform X3"
                     /calculated_mol_wt=69143
     Region          <102..216
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          429..628
                     /region_name="TACC_C"
                     /note="Transforming acidic coiled-coil-containing protein
                     (TACC), C-terminal; pfam05010"
                     /db_xref="CDD:461517"
     CDS             1..635
                     /gene="TACC1"
                     /coded_by="XM_041478090.1:754..2661"
                     /db_xref="GeneID:121359242"
ORIGIN      
        1 mqplaglgcq adpahaagep aplphvgtap werampggdp gtglvelgad vlgqeqlrkg
       61 ktpslgrkad egteetqrep eqhdrsvspf vagvcqlqss apaapqrlph pgelggdpal
      121 eapgqvpkpg adcteakesv eakpasprrg sripaskltp krhrespkka aedaesgpte
      181 pppprgscql gptgwdspgl sslsgssalq nspvlpkgsy qfdpnnfdsm dpfkptktla
      241 sadadscsta dnslneiles qtlemqddal kgrdspkkpk srlittteqv kflcfllsgc
      301 kvkqheaqpl vldisaqdeg vliseipdit nrdgratdee klasttstqk ptglekkaea
      361 eddleyfecs nvpvsagkhr aeagfekeic kqmekggpgi fpdnpglcsm dkcpsvgrse
      421 splagiclse sekaavltli reeiitkeie anewkkkyee srqevlemrk ivaeyektia
      481 qmiedeqrtn mtsqknlqql tmekdqalad lnsverslsd lfrryenlkg vlegfkknee
      541 alkkcaqdyl trvkqeeqry qalkvhaeek ldkaneeiaq vrtkakaesa alhaglrkeq
      601 mkveslertl qqknqeieel tkicdeliak lgksd
//
LOCUS       XP_041334030             397 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334030
VERSION     XP_041334030.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478096.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..397
                     /product="transforming acidic coiled-coil-containing
                     protein 1 isoform X4"
                     /calculated_mol_wt=44210
     Region          191..390
                     /region_name="TACC_C"
                     /note="Transforming acidic coiled-coil-containing protein
                     (TACC), C-terminal; pfam05010"
                     /db_xref="CDD:461517"
     CDS             1..397
                     /gene="TACC1"
                     /coded_by="XM_041478096.1:173..1366"
                     /db_xref="GeneID:121359242"
ORIGIN      
        1 mafsawqils pvqwarwtws avrgggspee gdggagaaee edeeedqepp aggsalgfrs
       61 gckvkqheaq plvldisaqd egvliseipd itnrdgratd eeklasttst qkptglekka
      121 eaeddleyfe csnvpvsagk hraeagfeke ickqmekggp gifpdnpglc smdkcpsvgr
      181 sesplagicl sesekaavlt lireeiitke ieanewkkky eesrqevlem rkivaeyekt
      241 iaqmiedeqr tnmtsqknlq qltmekdqal adlnsversl sdlfrryenl kgvlegfkkn
      301 eealkkcaqd yltrvkqeeq ryqalkvhae ekldkaneei aqvrtkakae saalhaglrk
      361 eqmkvesler tlqqknqeie eltkicdeli aklgksd
//
LOCUS       XP_041334045             757 aa            linear   VRT 06-MAY-2021
DEFINITION  inhibitor of nuclear factor kappa-B kinase subunit beta [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334045
VERSION     XP_041334045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..757
                     /product="inhibitor of nuclear factor kappa-B kinase
                     subunit beta"
                     /calculated_mol_wt=86749
     Region          20..309
                     /region_name="STKc_IKK_beta"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Inhibitor of Nuclear Factor-KappaB Kinase (IKK) beta;
                     cd14038"
                     /db_xref="CDD:270940"
     Site            order(21..25,29,42,44,74,96..99,103,105,145,147,149..150,
                     152,166,169,184..187)
                     /site_type="active"
                     /db_xref="CDD:270940"
     Site            order(21..25,29,42,44,74,96..99,103,145,147,149..150,152,
                     166)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270940"
     Site            order(25,103,105,145,147,149,169,184..187)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270940"
     Site            order(109,111,114..115,118,219,224,252..253,255,261..264)
                     /site_type="other"
                     /note="SDD interface [polypeptide binding]"
                     /db_xref="CDD:270940"
     Site            order(121,123..124,158..159)
                     /site_type="other"
                     /note="ULD interface [polypeptide binding]"
                     /db_xref="CDD:270940"
     Site            165..187
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270940"
     Site            order(229,231..232,236)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:270940"
     Region          310..390
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          389..663
                     /region_name="IKBKB_SDD"
                     /note="IQBAL scaffold dimerization domain; pfam18397"
                     /db_xref="CDD:465745"
     Region          706..742
                     /region_name="IKKbetaNEMObind"
                     /note="I-kappa-kinase-beta NEMO binding domain; pfam12179"
                     /db_xref="CDD:463485"
     CDS             1..757
                     /gene="IKBKB"
                     /coded_by="XM_041478111.1:60..2333"
                     /db_xref="GeneID:121359273"
ORIGIN      
        1 msrppalqal tcgpwemrer lgtggfgnvi rwhnketgeq vaikqcrqel sprnrdrwal
       61 eiqimkrlnh pnvvaardvp egmqklapnd lpllameycq ggdlrkylnq lenccglree
      121 ailillsdia salrylhenr iihrdlkpen ivlqqgeqrl ihkiidlgya keldqgslct
      181 sfvgtlqyla pelleqqkyt vtvdywsfgt lafecitgfr pflpnwqpvq whakvrqkse
      241 ldivvsedls gevkfssslp cpnnlnsvls grlekwlqlm lmwhprqrgt dptygpngcf
      301 kalddilnlk llhvlnmvtg tvhtypvtee etlqsvkari qsdtgipeqd qellqeagla
      361 lfsqklvtkh tadskvndta aadtdllflf dnkkvsyeaq valrphpesv dcilqdpkkn
      421 lhffqlrkvw gqiwhtirml kedcnrlqqg qraammnllr ynstlskmkn smaslsqqlk
      481 akldffktsi qidlekykeq iefgitsekl lfawkemeqa velcgreddv dqlvkrmmal
      541 qtdivdlqrs plgrkqggtl edleeqarel yrrlrekprd qrtsgdsqei vrlllqaiqt
      601 fekkvrviya qlsktvvckq kalelfprve kvmalmsede etvvrlqekr qkelwnllki
      661 acskvrgpvt gspesmntsr lgssgqlllq vpsgtynlsd svrkseelll esrklcsqle
      721 nvmhdtmkdq eqsflaldws wlqlqveetn spgqtem
//
LOCUS       XP_041334056             705 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic purine 5'-nucleotidase-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334056
VERSION     XP_041334056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478122.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..705
                     /product="cytosolic purine 5'-nucleotidase-like isoform
                     X1"
                     /calculated_mol_wt=77515
     Region          192..663
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; pfam05761"
                     /db_xref="CDD:461733"
     CDS             1..705
                     /gene="LOC121359277"
                     /coded_by="XM_041478122.1:399..2516"
                     /db_xref="GeneID:121359277"
ORIGIN      
        1 mirrralpaa sgaagqtaar ggggstgsps pargargalp vcgeragggv gapggargwl
       61 srsgvtvpfg ggcpvrgspa rgapapcspr rgrgavprgp vkaaaagggr rrwrwaaras
      121 garrrpgarg tatpgpcggt astgssstga wrwrrssala ltwttpwpvr fggalrqggg
      181 ppapahipls pavykspdye elafallleh lvaigyppei laykydptfp trglvfdaly
      241 gnllkvdshg nllvcahgfr flkgaeilhy ypnkfiqrdd mkrfhilntl fnlteahlya
      301 clvdfftncs ryvncdtgyk hgnlfmsfrs mfqdvreamd hvhlsgclke ktlenlekyv
      361 vkdprvplll srmkevgkvf latnsdytyt daimsylfdf snedkadvpr rpwrsyfdli
      421 vvdtrkplff aegtvlrqvd tdtgklrigt ytgplqhcav ysggssdvvc dllgvkgkdi
      481 lymgdhifgd ilkskkrqgw rtflvvpela relqvwteks elfeelrsld lflaelyqhl
      541 dsgsserpdi ssikrriqvt pralcrwhta qltplpqlpl wkapkellsa ltvllhpqkv
      601 themdmcygk mgslfrcgsr qtlfanqlmr yadlyaasfi nflyypfsyl frappvlmah
      661 estvehsrrd sgdvatalpp wlaqrgdphq vpqdssgeee ddgea
//
LOCUS       XP_041334064             665 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic purine 5'-nucleotidase-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334064
VERSION     XP_041334064.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478130.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..665
                     /product="cytosolic purine 5'-nucleotidase-like isoform
                     X2"
                     /calculated_mol_wt=72994
     Region          192..623
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; pfam05761"
                     /db_xref="CDD:461733"
     CDS             1..665
                     /gene="LOC121359277"
                     /coded_by="XM_041478130.1:399..2396"
                     /db_xref="GeneID:121359277"
ORIGIN      
        1 mirrralpaa sgaagqtaar ggggstgsps pargargalp vcgeragggv gapggargwl
       61 srsgvtvpfg ggcpvrgspa rgapapcspr rgrgavprgp vkaaaagggr rrwrwaaras
      121 garrrpgarg tatpgpcggt astgssstga wrwrrssala ltwttpwpvr fggalrqggg
      181 ppapahipls pavykspdye elafallleh lvaigyppei laykydptfp trglvfdaly
      241 gnllkvdshg nllvcahgfr flkgaeilhy ypnkfiqrdd mkrfhilntl fnlteahlya
      301 clvdfftncs ryvncdtgyk hgnlfmsfrs mfqdvreamd hvhlsgclke ktlenlekyv
      361 vkdprvplll srmkevgkvf latnsdytyt daimsylfdf snedkadvpr rpwrsyfdli
      421 vvdtrkplff aegtvlrqvd tdtgklrigt ytgplqhcav ysggssdvvc dllgvkgkdi
      481 lymgdhifgd ilkskkrqgw rtflvvpela relqvwteks elfeelrsld lflaelyqhl
      541 dsgsserpdi ssikrriqkv themdmcygk mgslfrcgsr qtlfanqlmr yadlyaasfi
      601 nflyypfsyl frappvlmah estvehsrrd sgdvatalpp wlaqrgdphq vpqdssgeee
      661 ddgea
//
LOCUS       XP_041334073             656 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic purine 5'-nucleotidase-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334073
VERSION     XP_041334073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478139.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..656
                     /product="cytosolic purine 5'-nucleotidase-like isoform
                     X3"
                     /calculated_mol_wt=72408
     Region          144..614
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; pfam05761"
                     /db_xref="CDD:461733"
     CDS             1..656
                     /gene="LOC121359277"
                     /coded_by="XM_041478139.1:399..2369"
                     /db_xref="GeneID:121359277"
ORIGIN      
        1 mirrralpaa sgaagqtaar ggggstgsps pargargalp vcgeragggv gapggargwl
       61 srsgvtvpfg ggcpvrgspa rgapapcspr rgrgavprgp vkaaaagggr rrwrwaaras
      121 garrrpgarg tatpgpcggt astvykspdy eelafallle hlvaigyppe ilaykydptf
      181 ptrglvfdal ygnllkvdsh gnllvcahgf rflkgaeilh yypnkfiqrd dmkrfhilnt
      241 lfnlteahly aclvdfftnc sryvncdtgy khgnlfmsfr smfqdvream dhvhlsgclk
      301 ektlenleky vvkdprvpll lsrmkevgkv flatnsdyty tdaimsylfd fsnedkadvp
      361 rrpwrsyfdl ivvdtrkplf faegtvlrqv dtdtgklrig tytgplqhca vysggssdvv
      421 cdllgvkgkd ilymgdhifg dilkskkrqg wrtflvvpel arelqvwtek selfeelrsl
      481 dlflaelyqh ldsgsserpd issikrriqv tpralcrwht aqltplpqlp lwkapkells
      541 altvllhpqk vthemdmcyg kmgslfrcgs rqtlfanqlm ryadlyaasf inflyypfsy
      601 lfrappvlma hestvehsrr dsgdvatalp pwlaqrgdph qvpqdssgee eddgea
//
LOCUS       XP_041334081             567 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic purine 5'-nucleotidase-like isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334081
VERSION     XP_041334081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="cytosolic purine 5'-nucleotidase-like isoform
                     X4"
                     /calculated_mol_wt=64748
     Region          39..525
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; pfam05761"
                     /db_xref="CDD:461733"
     CDS             1..567
                     /gene="LOC121359277"
                     /coded_by="XM_041478147.1:150..1853"
                     /db_xref="GeneID:121359277"
ORIGIN      
        1 mgsegqrgpa aargpghgdp ralrrdcqhr ifvnrslale kikcfgfdmd ytlamykspd
       61 yeelafalll ehlvaigypp eilaykydpt fptrglvfda lygnllkvds hgnllvcahg
      121 frflkgaeil hyypnkfiqr ddmkrfhiln tlfnlteahl yaclvdfftn csryvncdtg
      181 ykhgnlfmsf rsmfqdvrea mdhvhlsgcl kektlenlek yvvkdprvpl llsrmkevgk
      241 vflatnsdyt ytdaimsylf dfsnedkadv prrpwrsyfd livvdtrkpl ffaegtvlrq
      301 vdtdtgklri gtytgplqhc avysggssdv vcdllgvkgk dilymgdhif gdilkskkrq
      361 gwrtflvvpe larelqvwte kselfeelrs ldlflaelyq hldsgsserp dissikrriq
      421 vtpralcrwh taqltplpql plwkapkell saltvllhpq kvthemdmcy gkmgslfrcg
      481 srqtlfanql mryadlyaas finflyypfs ylfrappvlm ahestvehsr rdsgdvatal
      541 ppwlaqrgdp hqvpqdssge eeddgea
//
LOCUS       XP_041334091             527 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic purine 5'-nucleotidase-like isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334091
VERSION     XP_041334091.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478157.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..527
                     /product="cytosolic purine 5'-nucleotidase-like isoform
                     X5"
                     /calculated_mol_wt=60227
     Region          39..485
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; pfam05761"
                     /db_xref="CDD:461733"
     CDS             1..527
                     /gene="LOC121359277"
                     /coded_by="XM_041478157.1:148..1731"
                     /db_xref="GeneID:121359277"
ORIGIN      
        1 mgsegqrgpa aargpghgdp ralrrdcqhr ifvnrslale kikcfgfdmd ytlamykspd
       61 yeelafalll ehlvaigypp eilaykydpt fptrglvfda lygnllkvds hgnllvcahg
      121 frflkgaeil hyypnkfiqr ddmkrfhiln tlfnlteahl yaclvdfftn csryvncdtg
      181 ykhgnlfmsf rsmfqdvrea mdhvhlsgcl kektlenlek yvvkdprvpl llsrmkevgk
      241 vflatnsdyt ytdaimsylf dfsnedkadv prrpwrsyfd livvdtrkpl ffaegtvlrq
      301 vdtdtgklri gtytgplqhc avysggssdv vcdllgvkgk dilymgdhif gdilkskkrq
      361 gwrtflvvpe larelqvwte kselfeelrs ldlflaelyq hldsgsserp dissikrriq
      421 kvthemdmcy gkmgslfrcg srqtlfanql mryadlyaas finflyypfs ylfrappvlm
      481 ahestvehsr rdsgdvatal ppwlaqrgdp hqvpqdssge eeddgea
//
LOCUS       XP_041334100             503 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic purine 5'-nucleotidase-like isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334100
VERSION     XP_041334100.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478166.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="cytosolic purine 5'-nucleotidase-like isoform
                     X6"
                     /calculated_mol_wt=57312
     Region          30..461
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; pfam05761"
                     /db_xref="CDD:461733"
     CDS             1..503
                     /gene="LOC121359277"
                     /coded_by="XM_041478166.1:150..1661"
                     /db_xref="GeneID:121359277"
ORIGIN      
        1 mgsegqrgpa aargpghgdp ralrrdcqhr glvfdalygn llkvdshgnl lvcahgfrfl
       61 kgaeilhyyp nkfiqrddmk rfhilntlfn lteahlyacl vdfftncsry vncdtgykhg
      121 nlfmsfrsmf qdvreamdhv hlsgclkekt lenlekyvvk dprvplllsr mkevgkvfla
      181 tnsdytytda imsylfdfsn edkadvprrp wrsyfdlivv dtrkplffae gtvlrqvdtd
      241 tgklrigtyt gplqhcavys ggssdvvcdl lgvkgkdily mgdhifgdil kskkrqgwrt
      301 flvvpelare lqvwteksel feelrsldlf laelyqhlds gsserpdiss ikrriqvtpr
      361 alcrwhtaql tplpqlplwk apkellsalt vllhpqkvth emdmcygkmg slfrcgsrqt
      421 lfanqlmrya dlyaasfinf lyypfsylfr appvlmahes tvehsrrdsg dvatalppwl
      481 aqrgdphqvp qdssgeeedd gea
//
LOCUS       XP_041334110             430 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic purine 5'-nucleotidase-like isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334110
VERSION     XP_041334110.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478176.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..430
                     /product="cytosolic purine 5'-nucleotidase-like isoform
                     X7"
                     /calculated_mol_wt=48454
     Region          <71..388
                     /region_name="5_nucleotid"
                     /note="5' nucleotidase family; cl17687"
                     /db_xref="CDD:473086"
     CDS             1..430
                     /gene="LOC121359277"
                     /coded_by="XM_041478176.1:233..1525"
                     /db_xref="GeneID:121359277"
ORIGIN      
        1 mstvtpatst gtsscpsaac srtcarpwtt stslwvpwag gwaggcwqcw pfptrtpwev
       61 lasptpfllq gclkektlen lekyvvkdpr vplllsrmke vgkvflatns dytytdaims
      121 ylfdfsnedk advprrpwrs yfdlivvdtr kplffaegtv lrqvdtdtgk lrigtytgpl
      181 qhcavysggs sdvvcdllgv kgkdilymgd hifgdilksk krqgwrtflv vpelarelqv
      241 wtekselfee lrsldlflae lyqhldsgss erpdissikr riqvtpralc rwhtaqltpl
      301 pqlplwkapk ellsaltvll hpqkvthemd mcygkmgslf rcgsrqtlfa nqlmryadly
      361 aasfinflyy pfsylfrapp vlmahestve hsrrdsgdva talppwlaqr gdphqvpqds
      421 sgeeeddgea
//
LOCUS       XP_041334122             681 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoskeleton-associated protein 2-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334122
VERSION     XP_041334122.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478188.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..681
                     /product="cytoskeleton-associated protein 2-like isoform
                     X1"
                     /calculated_mol_wt=74672
     Region          409..664
                     /region_name="CKAP2_C"
                     /note="Cytoskeleton-associated protein 2 C-terminus;
                     pfam15297"
                     /db_xref="CDD:464623"
     CDS             1..681
                     /gene="CKAP2L"
                     /coded_by="XM_041478188.1:1086..3131"
                     /db_xref="GeneID:121359309"
ORIGIN      
        1 mstqslstet cvhcischlf aaqrrsqlqn cqaakerlkc tsakpflkdw tnhlnpplep
       61 vsklkhvnsn kkdvlgtvme gaqedgklga kamqdtghta lkkasnrcqr aggvcpvqpg
      121 nnvtfpasaq argrfpssss ghlnpersqk paqetvtaaa lqvgndhslh slnmglqdrl
      181 vcnkenlgpq astsselirt ihsnknslrk ervlahrqgr sgtsrsvlgq kgsmgnhqdk
      241 eetdldkfrk alpesrrsqn tsnttqplqp srllpastsm thknpgtkqg egttvrqpgt
      301 apggslkhsp tlgkpqgttn lksnlnpgvt lpwprpvvke vmdrkdmkvv apghtaasqg
      361 tghknqshgi hnskthvped dlrsrrdqpg pelpkasgmq arrvartpsa adrrkqleew
      421 laskgktykr ppmmllqkqa vkpscrkvka tekqenpeqr cqakinnift eclklieegv
      481 haeeisavls lvpraekfak fwicqaklla rsgpfdvlql yreavsagae pveelrqtal
      541 kilkdagqkl egekaeepia wepttpcpae rqpiastpgl vgrpmtflpp svklqvtsas
      601 rgkeflegpe lkfvtpvrrs lrteraqsry pemlkdhdpv vsslseilda eedtrfffrk
      661 nkalpevael eglssyppks s
//
LOCUS       XP_041334127             669 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoskeleton-associated protein 2-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334127
VERSION     XP_041334127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..669
                     /product="cytoskeleton-associated protein 2-like isoform
                     X2"
                     /calculated_mol_wt=73337
     Region          397..652
                     /region_name="CKAP2_C"
                     /note="Cytoskeleton-associated protein 2 C-terminus;
                     pfam15297"
                     /db_xref="CDD:464623"
     CDS             1..669
                     /gene="CKAP2L"
                     /coded_by="XM_041478193.1:435..2444"
                     /db_xref="GeneID:121359309"
ORIGIN      
        1 meragasela qrrsqlqncq aakerlkcts akpflkdwtn hlnpplepvs klkhvnsnkk
       61 dvlgtvmega qedgklgaka mqdtghtalk kasnrcqrag gvcpvqpgnn vtfpasaqar
      121 grfpssssgh lnpersqkpa qetvtaaalq vgndhslhsl nmglqdrlvc nkenlgpqas
      181 tsselirtih snknslrker vlahrqgrsg tsrsvlgqkg smgnhqdkee tdldkfrkal
      241 pesrrsqnts nttqplqpsr llpastsmth knpgtkqgeg ttvrqpgtap ggslkhsptl
      301 gkpqgttnlk snlnpgvtlp wprpvvkevm drkdmkvvap ghtaasqgtg hknqshgihn
      361 skthvpeddl rsrrdqpgpe lpkasgmqar rvartpsaad rrkqleewla skgktykrpp
      421 mmllqkqavk pscrkvkate kqenpeqrcq akinniftec lklieegvha eeisavlslv
      481 praekfakfw icqakllars gpfdvlqlyr eavsagaepv eelrqtalki lkdagqkleg
      541 ekaeepiawe pttpcpaerq piastpglvg rpmtflppsv klqvtsasrg keflegpelk
      601 fvtpvrrslr teraqsrype mlkdhdpvvs slseildaee dtrfffrknk alpevaeleg
      661 lssyppkss
//
LOCUS       XP_041334141             664 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-dependent phosphate transporter 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334141
VERSION     XP_041334141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..664
                     /product="sodium-dependent phosphate transporter 1 isoform
                     X1"
                     /calculated_mol_wt=71252
     Region          34..>234
                     /region_name="PHO4"
                     /note="Phosphate transporter family; pfam01384"
                     /db_xref="CDD:460184"
     Region          <488..650
                     /region_name="PHO4"
                     /note="Phosphate transporter family; pfam01384"
                     /db_xref="CDD:460184"
     CDS             1..664
                     /gene="SLC20A1"
                     /coded_by="XM_041478207.1:325..2319"
                     /db_xref="GeneID:121359319"
ORIGIN      
        1 meptpavlta pmadflwmlv lgfiiafvla fsvgandvan sfgtavgsgv vtlrqacila
       61 sifetvgsvl lgakvsetir kglidvemyn stqellmags isamsgsavw qlmasflklp
      121 isgthcivga tigfslvaqg qegvkwsell kivlswfisp llsgimsail fflvqrfilc
      181 kadpvpnglr alpvfyactv ginlfsimyt gapllgfdkl plwgillisa gsavvcalvv
      241 wffvcprmkk kidreikssp sesplmeknv cpkeeqeeak mplgdakgla aeagsavppr
      301 aageermvsf nlgeleeape qerlpsldlk etsidsagav rlpngnlvpl sqavghqlgs
      361 ggqyqyhtvh kdsglykell hklhlakmgd cmgdsgdkpl rrnnsytsyt maicgmplds
      421 lrardveege klswsvvdtk krvrmdsyts ycnavadahp aadvdlntaq aelgaaerkg
      481 ssgsleewhe qdkpevsllf qflqiltacf gsfahggndv snaigplval flvyqtgdva
      541 tkvatpiwll lyggagicig lwvwgrrviq tmgkdltpit pssgfsiela saltvviasn
      601 vglpistthc kvgsvvsvgw lrsrkavdwr lfrnifmawf vtvpisglis aaimavfkfa
      661 vlkv
//
LOCUS       XP_041334149             663 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-dependent phosphate transporter 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334149
VERSION     XP_041334149.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478215.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..663
                     /product="sodium-dependent phosphate transporter 1 isoform
                     X2"
                     /calculated_mol_wt=71181
     Region          34..>234
                     /region_name="PHO4"
                     /note="Phosphate transporter family; pfam01384"
                     /db_xref="CDD:460184"
     Region          <487..649
                     /region_name="PHO4"
                     /note="Phosphate transporter family; pfam01384"
                     /db_xref="CDD:460184"
     CDS             1..663
                     /gene="SLC20A1"
                     /coded_by="XM_041478215.1:324..2315"
                     /db_xref="GeneID:121359319"
ORIGIN      
        1 meptpavlta pmadflwmlv lgfiiafvla fsvgandvan sfgtavgsgv vtlrqacila
       61 sifetvgsvl lgakvsetir kglidvemyn stqellmags isamsgsavw qlmasflklp
      121 isgthcivga tigfslvaqg qegvkwsell kivlswfisp llsgimsail fflvqrfilc
      181 kadpvpnglr alpvfyactv ginlfsimyt gapllgfdkl plwgillisa gsavvcalvv
      241 wffvcprmkk kidreikssp sesplmeknv cpkeeqeeak mplgdakgla aeagsavppr
      301 aageermvsf nlgeleeape qerlpsldlk etsidsgavr lpngnlvpls qavghqlgsg
      361 gqyqyhtvhk dsglykellh klhlakmgdc mgdsgdkplr rnnsytsytm aicgmpldsl
      421 rardveegek lswsvvdtkk rvrmdsytsy cnavadahpa advdlntaqa elgaaerkgs
      481 sgsleewheq dkpevsllfq flqiltacfg sfahggndvs naigplvalf lvyqtgdvat
      541 kvatpiwlll yggagicigl wvwgrrviqt mgkdltpitp ssgfsielas altvviasnv
      601 glpistthck vgsvvsvgwl rsrkavdwrl frnifmawfv tvpisglisa aimavfkfav
      661 lkv
//
LOCUS       XP_041334159             622 aa            linear   VRT 06-MAY-2021
DEFINITION  nudC domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041334159
VERSION     XP_041334159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..622
                     /product="nudC domain-containing protein 3"
                     /calculated_mol_wt=67396
     Region          45..>318
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          277..336
                     /region_name="Nudc_N"
                     /note="N-terminal conserved domain of Nudc; pfam14050"
                     /db_xref="CDD:464073"
     Region          445..546
                     /region_name="p23_NUDCD3_like"
                     /note="p23-like NUD (nuclear distribution) C-like domain
                     found in human NUDC domain-containing protein 3 (NUDCD3)
                     and similar proteins. Little is known about the function
                     of the proteins in this subgroup; cd06495"
                     /db_xref="CDD:107244"
     CDS             1..622
                     /gene="NUDCD3"
                     /coded_by="XM_041478225.1:16..1884"
                     /db_xref="GeneID:121359335"
ORIGIN      
        1 mreqlllgal lragqgtsdp gqllpdrpra tgdkglapsg hgterglagd aaarghcraa
       61 aptepakgrs rwdrcwrgel whgapqelra qlrsgpgspr qragpergwl gsspsperss
      121 rgppeplplp fplplpvppp vprpalsppp sgagvarapp agaererqpp pagqsgewrg
      181 egeagargtr rvravghrgr agagsgrpll lpggawrpqr shrgagrale rsaggrglpg
      241 grnrsarggf radrkcgrtr crdsgpraam eaaltdmydq allgilqhvg nveeflrilf
      301 gflyrktdfy rlllrpgdrl gfppgaaqam alqafrvfer marqddekrr releaklrkk
      361 eeeeeaaaaa ervklcpaaq eievettehi paadageaag tqesaaaqga aapspesvep
      421 pgaaapaelp trqeqfqtnp dsyngavren ytwsqdysdl eikvpvpkhi vkgkqvsvdi
      481 ssgairvavl egssqhvlme gklthkinte sslwslepgk cilislnkgd eywwnaileg
      541 eeqididkin kersmatvde eehavldrlt fdyhqklqgk pqshelkvhe mlkkgwdteg
      601 spfrgqkfdp smfnispgav qf
//
LOCUS       XP_041334169             562 aa            linear   VRT 06-MAY-2021
DEFINITION  tissue-type plasminogen activator isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334169
VERSION     XP_041334169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="tissue-type plasminogen activator isoform X1"
                     /calculated_mol_wt=63521
     Region          125..210
                     /region_name="KR"
                     /note="Kringle domain; Kringle domains are believed to
                     play a role in binding mediators, such as peptides, other
                     proteins, membranes, or phospholipids. They are autonomous
                     structural domains, found in a varying number of copies,
                     in blood clotting and...; cd00108"
                     /db_xref="CDD:238056"
     Site            137
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(152,162,190,192,201)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          214..298
                     /region_name="KR"
                     /note="Kringle domain; Kringle domains are believed to
                     play a role in binding mediators, such as peptides, other
                     proteins, membranes, or phospholipids. They are autonomous
                     structural domains, found in a varying number of copies,
                     in blood clotting and...; cd00108"
                     /db_xref="CDD:238056"
     Site            226
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(241,251,279,281,290)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          319..559
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(363,412,513)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(507,532,534)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..562
                     /gene="PLAT"
                     /coded_by="XM_041478235.1:143..1831"
                     /db_xref="GeneID:121359343"
ORIGIN      
        1 mwktlrmegk lpcllllvga ittaqcqglh trfkrgarpr dictdhssae iyqhrgtwlr
       61 lsgsrieycr cdsgrsrcht vpvrvctrnk cynggqcsqa yyspqlficq crqgfsgkqc
      121 eidteakcye dtgvtyrgtw smtesrtecl nwnsgglvnw mytgqredaa elglgnhkyc
      181 rnpdedskpw cyiykggryt weycsvpscs earntncrsg rgtdyrgshs vtssgatclk
      241 wnslilvnkl ytawrrdayq lglgshnfcr npdndskpwc hvlkgnqltw eycnvpvcnv
      301 pistcglrqr rarqfstkgg syaeiaahpw qaaifvkyrr vpgehflcgg vlisscwvls
      361 aahcfeegfs tdqlkivlgr tsratpeete qkfqvktytv hqrfdsenln ndiallqlns
      421 daedcavetg tvrtaclptp elqlpdwtec eisgygrnee fspfysehlk egrvrlfpas
      481 rctaqyldnr tvtdnmlcag dtrhlddack gdsggplvcm kddrmfligi iswgigcgrk
      541 dipgvytnvv ryldwiqdtt kl
//
LOCUS       XP_041334177             518 aa            linear   VRT 06-MAY-2021
DEFINITION  tissue-type plasminogen activator isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334177
VERSION     XP_041334177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478243.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..518
                     /product="tissue-type plasminogen activator isoform X2"
                     /calculated_mol_wt=58430
     Region          81..166
                     /region_name="KR"
                     /note="Kringle domain; Kringle domains are believed to
                     play a role in binding mediators, such as peptides, other
                     proteins, membranes, or phospholipids. They are autonomous
                     structural domains, found in a varying number of copies,
                     in blood clotting and...; cd00108"
                     /db_xref="CDD:238056"
     Site            93
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(108,118,146,148,157)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          170..254
                     /region_name="KR"
                     /note="Kringle domain; Kringle domains are believed to
                     play a role in binding mediators, such as peptides, other
                     proteins, membranes, or phospholipids. They are autonomous
                     structural domains, found in a varying number of copies,
                     in blood clotting and...; cd00108"
                     /db_xref="CDD:238056"
     Site            182
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(197,207,235,237,246)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          275..515
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(319,368,469)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(463,488,490)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..518
                     /gene="PLAT"
                     /coded_by="XM_041478243.1:143..1699"
                     /db_xref="GeneID:121359343"
ORIGIN      
        1 mwktlrmegk lpcllllvga ittaqcqglh trfkrgarpr vctrnkcyng gqcsqayysp
       61 qlficqcrqg fsgkqceidt eakcyedtgv tyrgtwsmte srteclnwns gglvnwmytg
      121 qredaaelgl gnhkycrnpd edskpwcyiy kggrytweyc svpscsearn tncrsgrgtd
      181 yrgshsvtss gatclkwnsl ilvnklytaw rrdayqlglg shnfcrnpdn dskpwchvlk
      241 gnqltweycn vpvcnvpist cglrqrrarq fstkggsyae iaahpwqaai fvkyrrvpge
      301 hflcggvlis scwvlsaahc feegfstdql kivlgrtsra tpeeteqkfq vktytvhqrf
      361 dsenlnndia llqlnsdaed cavetgtvrt aclptpelql pdwteceisg ygrneefspf
      421 ysehlkegrv rlfpasrcta qyldnrtvtd nmlcagdtrh lddackgdsg gplvcmkddr
      481 mfligiiswg igcgrkdipg vytnvvryld wiqdttkl
//
LOCUS       XP_041334191             455 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041334191
VERSION     XP_041334191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="glycerol-3-phosphate acyltransferase 4"
                     /calculated_mol_wt=51721
     Region          217..426
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(247,250,252,266..269,322..324)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..455
                     /gene="GPAT4"
                     /coded_by="XM_041478257.1:934..2301"
                     /db_xref="GeneID:121359352"
ORIGIN      
        1 mflllpfdsl vvnllgisit vlftlllvfi ivpaifgvsf girkvymktl lkifqwatlr
       61 iergakeknh plykpyvngi iakeptslee eikeirrsgs gkaldtpefe lsdifyfcrk
      121 gietimddev tkrfsaeele swnllsrtny nfqyislrlt vlwglgvlvr ycfllplria
      181 laftgisllv tgttvvgylp ngrckdflsk hvhlmcyric vraltaiity hdrenrprng
      241 gicvanhtsp idviilasdg yyamvgqihg glmgviqram vkacphvwfe rsevkdrhlv
      301 arrltehvqd ksklpilifp egtcinntsv mmfkkgsfei gatvypvaik ydpqfgdafw
      361 nsskygmvty llrmmtswai vcsvwylppm trqpeedavq fanrvksaia rqgglvdllw
      421 dgglkrekvk dafkeeqqkl yskmivgshe drsrs
//
LOCUS       XP_041334200             455 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041334200
VERSION     XP_041334200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="glycerol-3-phosphate acyltransferase 4"
                     /calculated_mol_wt=51721
     Region          217..426
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(247,250,252,266..269,322..324)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..455
                     /gene="GPAT4"
                     /coded_by="XM_041478266.1:846..2213"
                     /db_xref="GeneID:121359352"
ORIGIN      
        1 mflllpfdsl vvnllgisit vlftlllvfi ivpaifgvsf girkvymktl lkifqwatlr
       61 iergakeknh plykpyvngi iakeptslee eikeirrsgs gkaldtpefe lsdifyfcrk
      121 gietimddev tkrfsaeele swnllsrtny nfqyislrlt vlwglgvlvr ycfllplria
      181 laftgisllv tgttvvgylp ngrckdflsk hvhlmcyric vraltaiity hdrenrprng
      241 gicvanhtsp idviilasdg yyamvgqihg glmgviqram vkacphvwfe rsevkdrhlv
      301 arrltehvqd ksklpilifp egtcinntsv mmfkkgsfei gatvypvaik ydpqfgdafw
      361 nsskygmvty llrmmtswai vcsvwylppm trqpeedavq fanrvksaia rqgglvdllw
      421 dgglkrekvk dafkeeqqkl yskmivgshe drsrs
//
LOCUS       XP_041334211             418 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit mu-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334211
VERSION     XP_041334211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478277.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="AP-3 complex subunit mu-2"
                     /calculated_mol_wt=46844
     Region          3..141
                     /region_name="AP3_Mu_N"
                     /note="AP-3 complex subunit mu N-terminal domain; cd14837"
                     /db_xref="CDD:341441"
     Site            order(18,21,46..47,55,57,59,71..73,75..77,80,84,110..111,
                     114..115,117..119,121..124,133,135..136)
                     /site_type="other"
                     /note="putative AP-3 beta interface [polypeptide binding]"
                     /db_xref="CDD:341441"
     Region          165..418
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     CDS             1..418
                     /gene="AP3M2"
                     /coded_by="XM_041478277.1:346..1602"
                     /db_xref="GeneID:121359364"
ORIGIN      
        1 mihslflina sgdiflekhw ksvvsrsvcd yffeaqeras eaenvppvip tphhyllsvy
       61 rhkiffvavi qsevpplfvi eflhrvvdtf qdyfgvcsev iikdnvvvvy evleemldng
      121 fplatesnil kelikpptil rtvvntitgs tnvgdqlptg qlsvvpwrrt gvkytnneay
      181 fdvieeidai idksgstita eiqgvidacv kltgmpdltl sfmnprlldd vsfhpcvrfk
      241 rweserilsf ippdgnfrll syhvsaqnlv aipvyvkhni sfrdssslgr feitvgpkqt
      301 mgktvegvmv tsqmpksvln mtltpsqgth tfdpvtklls wdvgkinpqk lpslkgsvsl
      361 qagtskpden ptinlqfkiq qlaisglkvn rldmygekyk pfkgikymtk agkfqvrt
//
LOCUS       XP_041334224             417 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334224
VERSION     XP_041334224.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478290.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="pleckstrin homology domain-containing family A
                     member 2"
                     /calculated_mol_wt=46327
     Region          1..119
                     /region_name="PH1_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, N-terminal repeat;
                     cd13270"
                     /db_xref="CDD:270089"
     Region          190..304
                     /region_name="PH2_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, C-terminal repeat;
                     cd13271"
                     /db_xref="CDD:270090"
     Site            order(205,207..208,216,227,237..238,272)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270090"
     CDS             1..417
                     /gene="PLEKHA2"
                     /coded_by="XM_041478290.1:601..1854"
                     /db_xref="GeneID:121359371"
ORIGIN      
        1 mpyldrqnri cgfldieene tcgkflrryf ildtqanhll wymdnpqnla igagavgslq
       61 ltyiskvsia tpkqkpktpf cfvinalsqr yflqasdqkd lqdwvealnr askitvpkgg
      121 svppateitk ppvvpqaqek kpqvayktei vggvvvhtpi sinqdgegse vgahpllrrs
      181 qsyippsatk ppagpaplks gfcvkqgnvr kswkrryfvl defsisyykc eqdkeplrsi
      241 llkdvckthe clvksgdllm rdnlfevits srtfyiqads peemhswira itgavqalkt
      301 rpremsfmrs tsvarpggss gpsqprpsae errasckaps tsswqpwtpv pqaegqrpal
      361 gglpaplrds vfvpalterq graapgtrlr hrsepqhlke kpfafdldde sirtsdv
//
LOCUS       XP_041334233             417 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334233
VERSION     XP_041334233.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478299.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="pleckstrin homology domain-containing family A
                     member 2"
                     /calculated_mol_wt=46327
     Region          1..119
                     /region_name="PH1_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, N-terminal repeat;
                     cd13270"
                     /db_xref="CDD:270089"
     Region          190..304
                     /region_name="PH2_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, C-terminal repeat;
                     cd13271"
                     /db_xref="CDD:270090"
     Site            order(205,207..208,216,227,237..238,272)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270090"
     CDS             1..417
                     /gene="PLEKHA2"
                     /coded_by="XM_041478299.1:363..1616"
                     /db_xref="GeneID:121359371"
ORIGIN      
        1 mpyldrqnri cgfldieene tcgkflrryf ildtqanhll wymdnpqnla igagavgslq
       61 ltyiskvsia tpkqkpktpf cfvinalsqr yflqasdqkd lqdwvealnr askitvpkgg
      121 svppateitk ppvvpqaqek kpqvayktei vggvvvhtpi sinqdgegse vgahpllrrs
      181 qsyippsatk ppagpaplks gfcvkqgnvr kswkrryfvl defsisyykc eqdkeplrsi
      241 llkdvckthe clvksgdllm rdnlfevits srtfyiqads peemhswira itgavqalkt
      301 rpremsfmrs tsvarpggss gpsqprpsae errasckaps tsswqpwtpv pqaegqrpal
      361 gglpaplrds vfvpalterq graapgtrlr hrsepqhlke kpfafdldde sirtsdv
//
LOCUS       XP_041334241             417 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334241
VERSION     XP_041334241.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478307.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="pleckstrin homology domain-containing family A
                     member 2"
                     /calculated_mol_wt=46327
     Region          1..119
                     /region_name="PH1_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, N-terminal repeat;
                     cd13270"
                     /db_xref="CDD:270089"
     Region          190..304
                     /region_name="PH2_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, C-terminal repeat;
                     cd13271"
                     /db_xref="CDD:270090"
     Site            order(205,207..208,216,227,237..238,272)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270090"
     CDS             1..417
                     /gene="PLEKHA2"
                     /coded_by="XM_041478307.1:462..1715"
                     /db_xref="GeneID:121359371"
ORIGIN      
        1 mpyldrqnri cgfldieene tcgkflrryf ildtqanhll wymdnpqnla igagavgslq
       61 ltyiskvsia tpkqkpktpf cfvinalsqr yflqasdqkd lqdwvealnr askitvpkgg
      121 svppateitk ppvvpqaqek kpqvayktei vggvvvhtpi sinqdgegse vgahpllrrs
      181 qsyippsatk ppagpaplks gfcvkqgnvr kswkrryfvl defsisyykc eqdkeplrsi
      241 llkdvckthe clvksgdllm rdnlfevits srtfyiqads peemhswira itgavqalkt
      301 rpremsfmrs tsvarpggss gpsqprpsae errasckaps tsswqpwtpv pqaegqrpal
      361 gglpaplrds vfvpalterq graapgtrlr hrsepqhlke kpfafdldde sirtsdv
//
LOCUS       XP_041334250             417 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334250
VERSION     XP_041334250.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478316.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="pleckstrin homology domain-containing family A
                     member 2"
                     /calculated_mol_wt=46327
     Region          1..119
                     /region_name="PH1_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, N-terminal repeat;
                     cd13270"
                     /db_xref="CDD:270089"
     Region          190..304
                     /region_name="PH2_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, C-terminal repeat;
                     cd13271"
                     /db_xref="CDD:270090"
     Site            order(205,207..208,216,227,237..238,272)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270090"
     CDS             1..417
                     /gene="PLEKHA2"
                     /coded_by="XM_041478316.1:526..1779"
                     /db_xref="GeneID:121359371"
ORIGIN      
        1 mpyldrqnri cgfldieene tcgkflrryf ildtqanhll wymdnpqnla igagavgslq
       61 ltyiskvsia tpkqkpktpf cfvinalsqr yflqasdqkd lqdwvealnr askitvpkgg
      121 svppateitk ppvvpqaqek kpqvayktei vggvvvhtpi sinqdgegse vgahpllrrs
      181 qsyippsatk ppagpaplks gfcvkqgnvr kswkrryfvl defsisyykc eqdkeplrsi
      241 llkdvckthe clvksgdllm rdnlfevits srtfyiqads peemhswira itgavqalkt
      301 rpremsfmrs tsvarpggss gpsqprpsae errasckaps tsswqpwtpv pqaegqrpal
      361 gglpaplrds vfvpalterq graapgtrlr hrsepqhlke kpfafdldde sirtsdv
//
LOCUS       XP_041334258             417 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334258
VERSION     XP_041334258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478324.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="pleckstrin homology domain-containing family A
                     member 2"
                     /calculated_mol_wt=46327
     Region          1..119
                     /region_name="PH1_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, N-terminal repeat;
                     cd13270"
                     /db_xref="CDD:270089"
     Region          190..304
                     /region_name="PH2_TAPP1_2"
                     /note="Tandem PH-domain-containing proteins 1 and 2
                     Pleckstrin homology (PH) domain, C-terminal repeat;
                     cd13271"
                     /db_xref="CDD:270090"
     Site            order(205,207..208,216,227,237..238,272)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270090"
     CDS             1..417
                     /gene="PLEKHA2"
                     /coded_by="XM_041478324.1:165..1418"
                     /db_xref="GeneID:121359371"
ORIGIN      
        1 mpyldrqnri cgfldieene tcgkflrryf ildtqanhll wymdnpqnla igagavgslq
       61 ltyiskvsia tpkqkpktpf cfvinalsqr yflqasdqkd lqdwvealnr askitvpkgg
      121 svppateitk ppvvpqaqek kpqvayktei vggvvvhtpi sinqdgegse vgahpllrrs
      181 qsyippsatk ppagpaplks gfcvkqgnvr kswkrryfvl defsisyykc eqdkeplrsi
      241 llkdvckthe clvksgdllm rdnlfevits srtfyiqads peemhswira itgavqalkt
      301 rpremsfmrs tsvarpggss gpsqprpsae errasckaps tsswqpwtpv pqaegqrpal
      361 gglpaplrds vfvpalterq graapgtrlr hrsepqhlke kpfafdldde sirtsdv
//
LOCUS       XP_041334268             408 aa            linear   VRT 06-MAY-2021
DEFINITION  indoleamine 2,3-dioxygenase 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041334268
VERSION     XP_041334268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="indoleamine 2,3-dioxygenase 2-like"
                     /calculated_mol_wt=44732
     Region          15..404
                     /region_name="IDO"
                     /note="Indoleamine 2,3-dioxygenase; pfam01231"
                     /db_xref="CDD:460123"
     CDS             1..408
                     /gene="LOC121359402"
                     /coded_by="XM_041478334.1:1..1227"
                     /db_xref="GeneID:121359402"
ORIGIN      
        1 meassdteep plplalprfq iseefgfllp dpltelpapy gpwmdiahel pqlitshqlr
       61 shvhqmpqln tqhlrgreel hlahlvlsfi tmgyvwqege egtvqvlprn lavpywevsq
      121 alglppilsh adfvlanwrr kdpngpleie nldtiitlpg geslrgfilv tllvekaavp
      181 gikaisralg atlqgdeesl hraleelaga ieamrealgr mhdyvdpevf ysviriflsg
      241 wkdnpamaqg liyegvspqp mafsggsaaq stvlhafdel lgichrqdsa aflrrmreym
      301 ppphrafvee irgsasprql vlrsgnaelr aafnrcvsal aafrsyhiti vtkyiaaaaa
      361 kakarraeps paagkppsal eakgtggshi fsflksirdt treamisa
//
LOCUS       XP_041334282             335 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase beta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334282
VERSION     XP_041334282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..335
                     /product="DNA polymerase beta isoform X1"
                     /calculated_mol_wt=38260
     Region          13..333
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     Site            order(101,103,105..110,113,135,149,179..180,183,185,
                     187..190,192,234,236,254,256,271..276,279,295)
                     /site_type="active"
                     /db_xref="CDD:143386"
     Site            order(101,103,105..110,113,135,179,183,189..190,192,234,
                     236,254,256,271..276,279)
                     /site_type="other"
                     /note="primer binding site [nucleotide binding]"
                     /db_xref="CDD:143386"
     Site            order(149,179..180,183,185,187..190,192,234,256,271..274,
                     276,279,295)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:143386"
     Site            order(190,192,256)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143386"
     CDS             1..335
                     /gene="POLB"
                     /coded_by="XM_041478348.1:300..1307"
                     /db_xref="GeneID:121359409"
ORIGIN      
        1 mskrkapqes pnegitdflt elanyernvn raihkynayr kaasvisryp skiqsgaeak
       61 kldgvgakia ekideflstg klrklekirq ddtsasinfl trvtgigpaa arkfveegik
      121 tledlrkieh klthhqrigl kyfedfekri preemlqmqe ivlqeikkld pnyiatvcgs
      181 frrgaessgd mdvllthpsf tsesskqskl lhqvveqlek vhfvtdmlsk gdtkfmgvcq
      241 lpdkedgtay phrridirli pkdqyycgvl yftgsdifnk nmrahalemg ftineytirr
      301 lgvtgvagea lpvecekdif dyiqwkyrep kdrse
//
LOCUS       XP_041334291             335 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase beta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334291
VERSION     XP_041334291.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478357.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..335
                     /product="DNA polymerase beta isoform X2"
                     /calculated_mol_wt=38260
     Region          13..333
                     /region_name="NT_POLXc"
                     /note="Nucleotidyltransferase (NT) domain of family X DNA
                     Polymerases; cd00141"
                     /db_xref="CDD:143386"
     Site            order(101,103,105..110,113,135,149,179..180,183,185,
                     187..190,192,234,236,254,256,271..276,279,295)
                     /site_type="active"
                     /db_xref="CDD:143386"
     Site            order(101,103,105..110,113,135,179,183,189..190,192,234,
                     236,254,256,271..276,279)
                     /site_type="other"
                     /note="primer binding site [nucleotide binding]"
                     /db_xref="CDD:143386"
     Site            order(149,179..180,183,185,187..190,192,234,256,271..274,
                     276,279,295)
                     /site_type="other"
                     /note="NTP binding site [chemical binding]"
                     /db_xref="CDD:143386"
     Site            order(190,192,256)
                     /site_type="metal-binding"
                     /note="metal binding triad [ion binding]"
                     /db_xref="CDD:143386"
     CDS             1..335
                     /gene="POLB"
                     /coded_by="XM_041478357.1:300..1307"
                     /db_xref="GeneID:121359409"
ORIGIN      
        1 mskrkapqes pnegitdflt elanyernvn raihkynayr kaasvisryp skiqsgaeak
       61 kldgvgakia ekideflstg klrklekirq ddtsasinfl trvtgigpaa arkfveegik
      121 tledlrkieh klthhqrigl kyfedfekri preemlqmqe ivlqeikkld pnyiatvcgs
      181 frrgaessgd mdvllthpsf tsesskqskl lhqvveqlek vhfvtdmlsk gdtkfmgvcq
      241 lpdkedgtay phrridirli pkdqyycgvl yftgsdifnk nmrahalemg ftineytirr
      301 lgvtgvagea lpvecekdif dyiqwkyrep kdrse
//
LOCUS       XP_041334299             328 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121359421 [Pyrgilauda ruficollis].
ACCESSION   XP_041334299
VERSION     XP_041334299.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478365.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="uncharacterized protein LOC121359421"
                     /calculated_mol_wt=35614
     CDS             1..328
                     /gene="LOC121359421"
                     /coded_by="XM_041478365.1:799..1785"
                     /db_xref="GeneID:121359421"
ORIGIN      
        1 magvqkassp lslqdrwsvl angkerfsre yglapwlwgs reaaprqfls aeaaeplpak
       61 qarpspeqrs raepgspkap rrilaagcga ggsggelgtg rnegtpavps gagasppvpa
      121 grnagngeqr hprrrsrcge srrtwngivr psrsghssws hrrrktcwlc hfsvarglal
      181 kgfrnaspvk plevhlgnnh rgppksldqr hrshprrvrd fwpeikdsev ldqrqgvswe
      241 lsgsstqkqs vvhlrnvgss flrktrrsag shskrqtvcc agktrpllss rppgddafpg
      301 rgqaflgrrg dsqrylapeg agacrgrr
//
LOCUS       XP_041334308             311 aa            linear   VRT 06-MAY-2021
DEFINITION  secreted frizzled-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334308
VERSION     XP_041334308.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478374.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="secreted frizzled-related protein 1"
                     /calculated_mol_wt=34882
     Region          49..172
                     /region_name="CRD_SFRP1"
                     /note="Cysteine-rich domain of the secreted
                     frizzled-related protein 1 (SFRP1), a regulator of Wnt
                     activity; cd07443"
                     /db_xref="CDD:143552"
     Site            order(64,66..68,70..72)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143552"
     Region          180..287
                     /region_name="NTR_Sfrp1_like"
                     /note="NTR domain, Secreted frizzled-related protein
                     (Sfrp) 1-like subfamily; composed of proteins similar to
                     human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins
                     containing an NTR domain C-terminal to a cysteine-rich
                     Frizzled domain. They show diverse...; cd03580"
                     /db_xref="CDD:239635"
     CDS             1..311
                     /gene="SFRP1"
                     /coded_by="XM_041478374.1:222..1157"
                     /db_xref="GeneID:121359432"
ORIGIN      
        1 mgsvrgpgga alralvsvaa gllacgvase ydyvsyqsdl gpypggrfya kphqcvaipa
       61 dlrlchsvgy dkmvlpnlld hetmaevkhq asswvpllnk nchmgtqvfl cslfapvcld
      121 rpvypcrwlc eavrdscepv mqffgffwpe mlkcdqfpqd dvciamtapn atevsrpkgt
      181 tvcppcdnem kseaivehlc asefalkmti kevkkengdk miiprkrkal klgpirkknl
      241 kklvlflkng adcpchqldn lshyflimgr qvktqyllta iykwdkknke fkkfmkkmks
      301 pdcptfpsvf k
//
LOCUS       XP_041334320             285 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1 regulatory subunit 3C-B-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334320
VERSION     XP_041334320.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478386.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..285
                     /product="protein phosphatase 1 regulatory subunit
                     3C-B-like"
                     /calculated_mol_wt=32277
     Region          34..99
                     /region_name="PBD_PPP1R3"
                     /note="PP1C binding domain found in protein phosphatase 1
                     regulatory subunit 3 (PPP1R3) family; cl41685"
                     /db_xref="CDD:455118"
     Site            order(63..69,71,73,75..81)
                     /site_type="other"
                     /note="PP1C binding site [polypeptide binding]"
                     /db_xref="CDD:439278"
     Region          132..236
                     /region_name="CBM_21"
                     /note="Carbohydrate/starch-binding module (family 21);
                     pfam03370"
                     /db_xref="CDD:427265"
     CDS             1..285
                     /gene="LOC121359441"
                     /coded_by="XM_041478386.1:1..858"
                     /db_xref="GeneID:121359441"
ORIGIN      
        1 mpvdlavrlc lshsppirkl lnsyeelrgn rgrkplrscl nqklsaepep errdkgskgq
       61 kkkqvvfadm kglsltavrf fskieedlcd lqhalsdlac frprksplwe acryvldfpq
      121 psanyvafrn slhsnfvcle scliqgrals gtvkvrniey ekkvtvritf dgwksfrdip
      181 cqymhstygs adtdifsfel tlpkpsishr gaefcisfqc gqkthwdnnh gknykichvg
      241 mihpvscavk sasrawehlg tsgaaalvls hlqtwrqset qapyw
//
LOCUS       XP_041334331             284 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent anion-selective channel protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334331
VERSION     XP_041334331.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478397.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="voltage-dependent anion-selective channel
                     protein 3 isoform X1"
                     /calculated_mol_wt=30423
     Region          4..283
                     /region_name="Porin3_VDAC"
                     /note="Voltage-dependent anion channel of the outer
                     mitochondrial membrane; cd07306"
                     /db_xref="CDD:132767"
     Site            order(16,20,47,62,85,155,283)
                     /site_type="active"
                     /note="putative determinants of voltage gating [active]"
                     /db_xref="CDD:132767"
     Site            order(27,29,258,260,278)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:132767"
     CDS             1..284
                     /gene="VDAC3"
                     /coded_by="XM_041478397.1:83..937"
                     /db_xref="GeneID:121359450"
ORIGIN      
        1 mavppsycdl gksardvfnk gygfgmvkle lktksssgvl eftatgcsnt dtgkasgsle
       61 tkykekchgl tftqkwntdn tlgtevcven qlaeglkvvl dttfvpntgk ksgklkttyk
      121 rdyvhvgcnv didfsgptvy gwavvgyegw lagyqmaydt akykisqtnf algykagdfq
      181 lhtnvndgte fggsiyqkvt skvetsvnla wtagsnntrf giagkyqvdd ktsvvakvnn
      241 asligigyth alrpgvkltl sglidgknfs agghklglgf elev
//
LOCUS       XP_041334338             284 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent anion-selective channel protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334338
VERSION     XP_041334338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478404.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="voltage-dependent anion-selective channel
                     protein 3 isoform X1"
                     /calculated_mol_wt=30423
     Region          4..283
                     /region_name="Porin3_VDAC"
                     /note="Voltage-dependent anion channel of the outer
                     mitochondrial membrane; cd07306"
                     /db_xref="CDD:132767"
     Site            order(16,20,47,62,85,155,283)
                     /site_type="active"
                     /note="putative determinants of voltage gating [active]"
                     /db_xref="CDD:132767"
     Site            order(27,29,258,260,278)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:132767"
     CDS             1..284
                     /gene="VDAC3"
                     /coded_by="XM_041478404.1:30..884"
                     /db_xref="GeneID:121359450"
ORIGIN      
        1 mavppsycdl gksardvfnk gygfgmvkle lktksssgvl eftatgcsnt dtgkasgsle
       61 tkykekchgl tftqkwntdn tlgtevcven qlaeglkvvl dttfvpntgk ksgklkttyk
      121 rdyvhvgcnv didfsgptvy gwavvgyegw lagyqmaydt akykisqtnf algykagdfq
      181 lhtnvndgte fggsiyqkvt skvetsvnla wtagsnntrf giagkyqvdd ktsvvakvnn
      241 asligigyth alrpgvkltl sglidgknfs agghklglgf elev
//
LOCUS       XP_041334346             283 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent anion-selective channel protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334346
VERSION     XP_041334346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="voltage-dependent anion-selective channel
                     protein 3 isoform X2"
                     /calculated_mol_wt=30310
     Region          4..282
                     /region_name="Porin3_VDAC"
                     /note="Voltage-dependent anion channel of the outer
                     mitochondrial membrane; cd07306"
                     /db_xref="CDD:132767"
     Site            order(16,20,46,61,84,154,282)
                     /site_type="active"
                     /note="putative determinants of voltage gating [active]"
                     /db_xref="CDD:132767"
     Site            order(27,29,257,259,277)
                     /site_type="other"
                     /note="putative dimerization interface [polypeptide
                     binding]"
                     /db_xref="CDD:132767"
     CDS             1..283
                     /gene="VDAC3"
                     /coded_by="XM_041478412.1:83..934"
                     /db_xref="GeneID:121359450"
ORIGIN      
        1 mavppsycdl gksardvfnk gygfgmvkle lktksssgve ftatgcsntd tgkasgslet
       61 kykekchglt ftqkwntdnt lgtevcvenq laeglkvvld ttfvpntgkk sgklkttykr
      121 dyvhvgcnvd idfsgptvyg wavvgyegwl agyqmaydta kykisqtnfa lgykagdfql
      181 htnvndgtef ggsiyqkvts kvetsvnlaw tagsnntrfg iagkyqvddk tsvvakvnna
      241 sligigytha lrpgvkltls glidgknfsa gghklglgfe lev
//
LOCUS       XP_041334357             271 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334357
VERSION     XP_041334357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478423.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="zinc finger matrin-type protein 4 isoform X1"
                     /calculated_mol_wt=29960
     Region          55..78
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          56..78
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(63..65,67..68,72,77,122,125..129,131..132)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          112..146
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          117..139
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          184..217
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          189..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(196..198,200..201,205,210,247,250..254,256..257)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          240..264
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          242..264
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..271
                     /gene="ZMAT4"
                     /coded_by="XM_041478423.1:51..866"
                     /db_xref="GeneID:121359472"
ORIGIN      
        1 malpgrsrga garlerprra rgtgpggaar rprrhrpdpk mkssdidqel ftesyckvcs
       61 aqlisesqrv ahyesrkhas kvrlyymlhp vdggcpakkl rsengsdgds vdknkcctlc
      121 nmsftsavva eshyqgkiha krlklllgeq palkateaal galkpahtes apavppppqp
      181 qrrdsdrhcq lctawfnnpl maqqhydgkk hkknaaradl leqlgktldl gelrglkrsy
      241 tcnicnvtln sieqyhahlk gskhqtnlkn q
//
LOCUS       XP_041334366             231 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334366
VERSION     XP_041334366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..231
                     /product="zinc finger matrin-type protein 4 isoform X2"
                     /calculated_mol_wt=25622
     Region          15..38
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          16..38
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(23..25,27..28,32,37,82,85..89,91..92)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          72..106
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          77..99
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(156..158,160..161,165,170,207,210..214,216..217)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          200..224
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          202..224
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..231
                     /gene="ZMAT4"
                     /coded_by="XM_041478432.1:346..1041"
                     /db_xref="GeneID:121359472"
ORIGIN      
        1 mkssdidqel ftesyckvcs aqlisesqrv ahyesrkhas kvrlyymlhp vdggcpakkl
       61 rsengsdgds vdknkcctlc nmsftsavva eshyqgkiha krlklllgeq palkateaal
      121 galkpahtes apavppppqp qrrdsdrhcq lctawfnnpl maqqhydgkk hkknaaradl
      181 leqlgktldl gelrglkrsy tcnicnvtln sieqyhahlk gskhqtnlkn q
//
LOCUS       XP_041334379             269 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 beta [Pyrgilauda ruficollis].
ACCESSION   XP_041334379
VERSION     XP_041334379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478445.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="interleukin-1 beta"
                     /calculated_mol_wt=29597
     Region          1..96
                     /region_name="IL1_propep"
                     /note="Interleukin-1 propeptide; pfam02394"
                     /db_xref="CDD:426754"
     Region          113..267
                     /region_name="beta-trefoil_IL1B"
                     /note="beta-trefoil domain found in interleukin-1 beta
                     (IL-1 beta) and similar proteins; cd23296"
                     /db_xref="CDD:466778"
     Site            order(115,122,124..126,132,135,138,140..144,147,149,157,
                     159,162..164,172,209..210,219..221,224..227,229,244,
                     246..248,255..256,259,262..263)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:466778"
     Site            order(130..133,136,138,140,142,148..150,182,202..204,247)
                     /site_type="other"
                     /note="antibody binding site [polypeptide binding]"
                     /db_xref="CDD:466778"
     CDS             1..269
                     /gene="IL1B"
                     /coded_by="XM_041478445.1:1454..2263"
                     /db_xref="GeneID:121359483"
ORIGIN      
        1 mafvpdldtl essslneetl ygpsclcpqk kprldlegts pgvdiqvtvt kgplsrtfrq
       61 aailvvavtk lqkqltakdf adsdlgsfld difepisfqh irgtytrapv frytrsqsfd
      121 ildidhkcfv lesptqlval hlqgpsagqk vklnialyrp rssqgapgsg kmpvalgikg
      181 yqlymscvms gtkpvlqlee adirrdiesv eltrfifyrl dspaegttrf esaafpgwfv
      241 ctslqprqpv gitntpdqvn iatyelsgr
//
LOCUS       XP_041334393             260 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Nkx-6.3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334393
VERSION     XP_041334393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..260
                     /product="homeobox protein Nkx-6.3 isoform X1"
                     /calculated_mol_wt=27721
     Region          138..196
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..260
                     /gene="NKX6-3"
                     /coded_by="XM_041478459.1:441..1223"
                     /db_xref="GeneID:121359488"
ORIGIN      
        1 mdanlpgtfl lngpslgpfp eakapvcqys vqssfyklap pglgaqlaag tphgisdilg
       61 rpaatpngtl lpgyphaggf nglsspgvyy gpqvgalpka ggeylprgrs cwaeaapewr
      121 ggrqcggppa hladsihkkk htrptftghq ifalektfeq tkylagpera rlayslgmte
      181 sqvkvwfqnr rtkwrkksal epssssqrag gsggeraase teddeynkpl dpdsddekir
      241 lllrkhraaf smlglgthsg
//
LOCUS       XP_041334407             249 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Nkx-6.3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334407
VERSION     XP_041334407.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478473.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="homeobox protein Nkx-6.3 isoform X2"
                     /calculated_mol_wt=26451
     Region          138..>184
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..249
                     /gene="NKX6-3"
                     /coded_by="XM_041478473.1:441..1190"
                     /db_xref="GeneID:121359488"
ORIGIN      
        1 mdanlpgtfl lngpslgpfp eakapvcqys vqssfyklap pglgaqlaag tphgisdilg
       61 rpaatpngtl lpgyphaggf nglsspgvyy gpqvgalpka ggeylprgrs cwaeaapewr
      121 ggrqcggppa hladsihkkk htrptftghq ifalektfeq tkylagpera rlayslgmte
      181 sqvkssipge rviserlqag iifiwdcsgq vrvaarppvp kghhfltwlc qelppwpctv
      241 pkistlpet
//
LOCUS       XP_041334419             220 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA replication complex GINS protein SLD5 [Pyrgilauda ruficollis].
ACCESSION   XP_041334419
VERSION     XP_041334419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..220
                     /product="DNA replication complex GINS protein SLD5"
                     /calculated_mol_wt=24974
     Region          23..143
                     /region_name="GINS_A_Sld5"
                     /note="Alpha-helical domain of GINS complex protein Sld5;
                     cd11711"
                     /db_xref="CDD:212549"
     Site            order(49,52,90,94,98..99,119,122,124,126..136)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:212549"
     Region          162..220
                     /region_name="GINS_B_Sld5"
                     /note="beta-strand (B) domain of GINS complex protein
                     Sld5; cd21692"
                     /db_xref="CDD:412028"
     Site            order(163,165..167,169,187,196,199..204)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:412028"
     CDS             1..220
                     /gene="GINS4"
                     /coded_by="XM_041478485.1:85..747"
                     /db_xref="GeneID:121359501"
ORIGIN      
        1 maaatggdsd gdseelvltp aqlihsleqa wlnekfapel leskpeviec vveqldhmea
       61 nlkrakrgdl kvsvhhmeie riryvlssyl rcrlvkiekf fphilekeks raegepsils
      121 peefafakey manteaylkn valkhmppnl qkvsllksvp kpnldsfvfl rvlerqenil
      181 vepetdeqre ytinleegsq hliryrtvap lvasgavqli
//
LOCUS       XP_041334431             201 aa            linear   VRT 06-MAY-2021
DEFINITION  TM2 domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334431
VERSION     XP_041334431.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478497.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="TM2 domain-containing protein 2"
                     /calculated_mol_wt=21508
     Region          <61..>137
                     /region_name="tRNA-synt_1g"
                     /note="tRNA synthetases class I (M); pfam09334"
                     /db_xref="CDD:401322"
     Region          133..182
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     CDS             1..201
                     /gene="TM2D2"
                     /coded_by="XM_041478497.1:70..675"
                     /db_xref="GeneID:121359509"
ORIGIN      
        1 mappvgyall cgqaalllgn llllhgrglp dndtesrelp pgppaaaway sdpraplvlc
       61 tylpdefvec eepvdhggna taqqelghgc vkfggqahge vdhtrvqcra ldgiecaepr
      121 sflrgsrpcv kytghyfitt llysfflgcf gvdrfclght gtavgklltl gglgiwwfvd
      181 lillitgglm psdgsnwctv y
//
LOCUS       XP_041334444             165 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase A [Pyrgilauda ruficollis].
ACCESSION   XP_041334444
VERSION     XP_041334444.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478510.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="peptidyl-prolyl cis-trans isomerase A"
                     /calculated_mol_wt=17735
     Region          4..162
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(54..55,60,111,113,121)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..165
                     /gene="PPIA"
                     /coded_by="XM_041478510.1:83..580"
                     /db_xref="GeneID:121359517"
ORIGIN      
        1 manpvvffdi aangeplgrv tfelfadkvp ktaenfrals tgekgfgykg scfhriipgf
       61 mcqggdftrh ngtggksiyg ekfpdenfil khtgpgilsm anagpntngs qffictakte
      121 wldgkhvvfg rvkegmnvve amercgskdg ktskkititd cgqls
//
LOCUS       XP_041334456             137 aa            linear   VRT 06-MAY-2021
DEFINITION  golgin subfamily A member 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041334456
VERSION     XP_041334456.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478522.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="golgin subfamily A member 7"
                     /calculated_mol_wt=15627
     Region          11..124
                     /region_name="Erf4"
                     /note="Golgin subfamily A member 7/ERF4 family; pfam10256"
                     /db_xref="CDD:463029"
     CDS             1..137
                     /gene="GOLGA7"
                     /coded_by="XM_041478522.1:127..540"
                     /db_xref="GeneID:121359526"
ORIGIN      
        1 mrpqqapvsg kvfiqrdysg gtrcqfqskf paelenridr qqfeetvrtl nnlyaeaekl
       61 ggqsylegcl acltaytifl cmethyekvl kkiakfiqeq nekiyapqgl lltdpiergl
      121 rvieitiyed rgltsgr
//
LOCUS       XP_041334470             106 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional and immune response regulator [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334470
VERSION     XP_041334470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..106
                     /product="transcriptional and immune response regulator"
                     /calculated_mol_wt=11896
     Region          10..85
                     /region_name="TC1"
                     /note="Thyroid cancer protein 1; pfam15063"
                     /db_xref="CDD:464478"
     CDS             1..106
                     /gene="TCIM"
                     /coded_by="XM_041478536.1:62..382"
                     /db_xref="GeneID:121359533"
ORIGIN      
        1 mkaktgsssa amstslrvsp svhgyrfdta lrkkaaanif esineaslqk lfknsgdkka
       61 eerakiilat dqdmeektra lmalkqrrkd kllqfltfrk yslkvr
//
LOCUS       XP_041334490             542 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 703 [Pyrgilauda ruficollis].
ACCESSION   XP_041334490
VERSION     XP_041334490.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478556.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..542
                     /product="zinc finger protein 703"
                     /calculated_mol_wt=55417
     Region          70..>140
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     Region          <106..331
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          273..326
                     /region_name="nlz1"
                     /note="NocA-like zinc-finger protein 1; pfam12402"
                     /db_xref="CDD:403564"
     Region          415..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..542
                     /gene="ZNF703"
                     /coded_by="XM_041478556.1:1..1629"
                     /db_xref="GeneID:121359540"
ORIGIN      
        1 mssnpchgkl cqqcraelcr hchatppsrg aaaapsprpp padplrqasr lpirvlkmls
       61 ahgghllhpe ylqplsstpv spieldakks plallaqtcs qigkpdppps sklnavaaaa
      121 paadkepsar paalkppgsg dapaedkssf kpyskgggep rkeggadkag frvpsaacpp
      181 fpphaaaspg gsrgaspqhp dpkgaeekke pesgkpspeg tggalgrgvv epgahgepps
      241 grkseppalp paghvapvsp ykpghsvfpl ppssigyhgs ivgayagyps qfvpgldptk
      301 pglvgsqlpg alglpgkpps sspltgaspp sfmqglcrdp yclsyhsash lgssncsscv
      361 hdpgslksgy plvypthplh svhttlsssg tpslpghply tygfmlqndp lphicnwvsa
      421 sgpcdkrfat seellthlrt htalpgaekl lagyptsglg saaschlhlp paapgspntl
      481 paslslrsph tlglnryhpy gkshlptaga lpvpslpaag pyyspyalyg qrltsasalg
      541 yq
//
LOCUS       XP_041334503            1227 aa            linear   VRT 06-MAY-2021
DEFINITION  rab11 family-interacting protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334503
VERSION     XP_041334503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478569.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1227
                     /product="rab11 family-interacting protein 1"
                     /calculated_mol_wt=129402
     Region          76..194
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          464..>820
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1170..1216
                     /region_name="RBD-FIP"
                     /note="FIP domain; pfam09457"
                     /db_xref="CDD:462805"
     CDS             1..1227
                     /gene="RAB11FIP1"
                     /coded_by="XM_041478569.1:1..3684"
                     /db_xref="GeneID:121359548"
ORIGIN      
        1 mlqgvrdrht pglthlhlyt ftcthspiht hlyspvltck hepvrspvht ypcintctht
       61 hlyththlys pvhtwvtvlr arglrakaaa ggsdayavma lgrdkfrtsv aercrgeplw
      121 reeatfelpa rpaalrltvl hralagadkf lgraevelaa lrddggrrht rwyklhskpg
      181 kkekergeie vdiqfmrsnm tasmfdlsmk dkprspfgkl kdklkgkrss glsdtasaiv
      241 pstshspads edeavekekk kskfkalfsk pglqktslsq smsvlptqqp ltqrvrlrps
      301 dfqaqwdeee setspasepp advgrrspsg dahhteeavt tkqllspcee eqkpekaapa
      361 ktkavkprlg lspeeepkat lptlapdplp aflsvhriss annpfisevg qtvqvpdsen
      421 visspaslts pafaaelwnd knpftpewdr asraldpdsi arfpsshhpa acvpkvplpg
      481 qvsargknpf aadweqgpeg seasqglsgs rtpsvpsdcp fnannpfmsk rgaqavpgsq
      541 dgsspsclpg gedcsstghl argasggsad valtsdvtav pdplgtlsgp pagpsglape
      601 phwdsaqlqp egslesskpg rgksvsfvlg ewqgvpsgdv glggqeggeq pldssgrlqm
      661 rsgaagerag fggelgaggd pskelshptw nsdgtavevt ggsteactrg dkgfvslskc
      721 sdslvpeadq aqspeselre eqetcggkqw aecvptlepq apppagnepl sqvsatprac
      781 mvspgegdpg ragsevlvpp kpaprlavll rkspatpqae lrgdvpasgd gvkstpgllf
      841 pepsaargcl pqggsletvt pavaprgkss grpsgkeggd dlsvsltnvr savpvpgdrg
      901 salaglpvip eggsddellg dcqdscgata gdkgvlgnge qprgltplrg eqpelcdssa
      961 aapvipaapg ggagaipgac epgslavlpa avgaprvcvq ggdsglgvts hsrecdshfe
     1021 kqelersagd eeraecdfse psafssslss pcqpyssshs llsdtpsrra espkkpraeg
     1081 fadkagnsgk kkllqarvsp setfpnqtpr gaetvspkhr lhpvkpmnam ankpqsknln
     1141 vistmnekll emsvkkydps dpayayaqlt hdeliqlvlk qkdtisrkdl qvreledyid
     1201 nllvrvmeet pnilrvsmag nkkagkm
//
LOCUS       XP_041334527             910 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 18-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334527
VERSION     XP_041334527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478593.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..910
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 18-like"
                     /calculated_mol_wt=100752
     Region          14..125
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          170..367
                     /region_name="Reprolysin"
                     /note="Reprolysin (M12B) family zinc metalloprotease;
                     pfam01421"
                     /db_xref="CDD:426256"
     Region          386..459
                     /region_name="Disintegrin"
                     /note="pfam00200"
                     /db_xref="CDD:459709"
     Region          463..601
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     Region          587..631
                     /region_name="EB"
                     /note="EB module; pfam01683"
                     /db_xref="CDD:460294"
     Region          <737..885
                     /region_name="PTZ00341"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional"
                     /db_xref="CDD:173534"
     CDS             1..910
                     /gene="LOC121359562"
                     /coded_by="XM_041478593.1:1..2733"
                     /db_xref="GeneID:121359562"
ORIGIN      
        1 mitnrnrlhn llkitipqql gantkgeavs yilriegrly tihlqqhafl sddfqtyvsg
       61 eqgslysdsa haeggchywg yidgfpssav tlntcsglrg llqfenvsyg iqplgyspaf
      121 qhvlyrvsee qmaqalrahs ppeaglpawq mldnapgede plsaaaqspk yltvyvvldk
      181 alynymgsdp naatqniiqa fnlinnmfnp lnvtivlssl elwaegdkis tagdtddllq
      241 rfsqwkqlsl epqahniasl lgyrdhgalv gaaapgeacq rdaaatvaly nrnvtlesfs
      301 vllaqvlahs lgmspdsprg cscpgrvctm spealhfsga ksfsncsird fetflkqgrg
      361 sclfgsprli rlsrqseavc gngvvepgeq cdcgteqecl kdkcctktcr lkprarcatg
      421 lccrncqfkr rnspcrpaad aqcdlpefcs gssascppdv yvqngqecgh gtgycyggrc
      481 qspdlqckql ygrdsknapl vcyeeinsqr drfghcgfkd grnyrrcvwr dlrcgklict
      541 ypshkpfssp aaavmyaqvr hhlcvtvnyl nvptwldpll vppgtkcgsg rvcinntchp
      601 lsvlgqncds kenchghgvc nnkgnchcnp gwqppdcrrr gsrrggsrds glqltegglq
      661 raledaemaw lvlgsslvll lltaalglgl wrqqvpgqrc eeqalgtegt rrdtdreler
      721 dlelnwepdl elhrepdlkr nrepdpelsr epvlepnlep dlelnrepdl epnlepdpel
      781 srepdlepnl epdlelhrep dlepnlepdp elnlepdlel nqkpdlepnq kpdpelnlep
      841 dlelhrepdl epnlepdpel nlepdlelnq kpdpevapel qtdvelepel emktdtdptp
      901 apalgqhhgh
//
LOCUS       XP_041334537             473 aa            linear   VRT 06-MAY-2021
DEFINITION  steroid 21-hydroxylase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041334537
VERSION     XP_041334537.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478603.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="steroid 21-hydroxylase-like"
                     /calculated_mol_wt=50674
     Region          53..464
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(113,117,124,168,278..279,282..283,286..287,290,338,
                     348,350,373,406..408,412..416,419..420)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410767"
     Site            order(196..197,278,281..282,286,346..349)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410767"
     CDS             1..473
                     /gene="LOC121359571"
                     /coded_by="XM_041478603.1:1..1422"
                     /db_xref="GeneID:121359571"
ORIGIN      
        1 mavlllclll lsllsllsrl srrgdgrgpr wgalhllhpq galhlsrlar rhgpvlrmrl
       61 ggrdvlvass vatirealvr hwgdwlgrpp sylgslvsrg grdlalggpc pgwrrqrgav
      121 rgalaraggr lgpllwlqgr elceelrshg eapldpfevf tfhtcstiar llfgdlvppp
      181 gelrafsrcl gellqvwghs svrvldllpl lralpnpglq kllqlvqqrd afveaqiqrh
      241 qacpsplpdt vlgallgrts garggplspp rlhmalvdlf iggtettaaa lgwavafllh
      301 rpelqarlra elqgaqgppg pgdtgrlpll qatvsetlrl rppaplalph calrhsslgg
      361 lpvvagtvlv pnllaaqqdp diwqhpevfl perflapgap srsllpfgcg arscpgegla
      421 raelfvflgl ilrefrlepg paglpglrgs pgtvlrcppf lmrmvpcqpp gsp
//
LOCUS       XP_041334550             674 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type II subunit beta
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334550
VERSION     XP_041334550.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478616.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..674
                     /product="calcium/calmodulin-dependent protein kinase type
                     II subunit beta"
                     /calculated_mol_wt=71973
     Region          114..401
                     /region_name="STKc_CaMKII"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type II;
                     cd14086"
                     /db_xref="CDD:270988"
     Site            order(118..122,126,139,141,172,188..191,195,197,233..234,
                     236,238..239,241,254..255,258,273..277,279)
                     /site_type="active"
                     /db_xref="CDD:270988"
     Site            order(118..121,126,139,141,172,188..191,195,238..239,241,
                     254..255)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270988"
     Site            order(122,195,197,233..234,236,238,258,273..277,279)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270988"
     Site            order(254..264,267..277)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270988"
     Site            order(392,394..401)
                     /site_type="other"
                     /note="CaM binding site [polypeptide binding]"
                     /db_xref="CDD:270988"
     Region          509..>564
                     /region_name="NTF2_like"
                     /note="Nuclear transport factor 2 (NTF2-like) superfamily.
                     This family includes members of the NTF2 family,
                     Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases,
                     and the beta subunit of Ring hydroxylating dioxygenases.
                     This family is a classic example of...; cl09109"
                     /db_xref="CDD:471850"
     CDS             1..674
                     /gene="CAMK2B"
                     /coded_by="XM_041478616.1:1..2025"
                     /db_xref="GeneID:121359579"
ORIGIN      
        1 mcppltgvgg giplaggklr hgsghdattt tatttvtatt iititattat aairathcsh
       61 ahprqgplcq glpptrvgvh ppllshcgcs plpsgaesrv ggtpthpevl wgvlslslpr
      121 gafsvvrrcv klctgheyaa kiintkklsa rdhqklerea ricrllkhsn ivrlhdsise
      181 egfhylvfdl vtggelfedi vareyysead ashciqqile avlhchqmgv vhrdlkpenl
      241 llaskckgaa vkladfglai evqgdqqawf gfagtpgyls pevlrkeayg kpvdiwacgv
      301 ilyillvgyp pfwdedqhkl yqqikagayd fpspewdtvt peaknlinqm ltinpakrit
      361 ahealkhpwv cqrstvasmm hrqetveclk kfnarrklkg ailttmlatr nfsvgrqtta
      421 pptmsaaaag aplglveqaa ksllnkkadg vkpqtnstkg sagvtspkgt lpptalepqs
      481 tvihnpadga kessdstntt iededtkark qeiikiteql ieavnngdfe ayakicdpgl
      541 tsfepealgn lvegmdfhrf yfenceypsc prpccpappl pssparalls pclppslspv
      601 scplpahpgh laclspallc wamcllalpp slplplcqlr vqagfgrgda gatsggswgv
      661 lglgvggsgr ssqh
//
LOCUS       XP_041334560            1117 aa            linear   VRT 06-MAY-2021
DEFINITION  adipocyte enhancer-binding protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334560
VERSION     XP_041334560.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478626.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1117
                     /product="adipocyte enhancer-binding protein 1"
                     /calculated_mol_wt=125408
     Region          389..542
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(437,465,472)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     Region          568..903
                     /region_name="Peptidase_M14_like"
                     /note="M14 family of metallocarboxypeptidases and related
                     proteins; cl11393"
                     /db_xref="CDD:472171"
     Site            order(629,632,694,703..704,767..768,774,874)
                     /site_type="active"
                     /db_xref="CDD:349427"
     Region          907..982
                     /region_name="Peptidase_M14NE-CP-C_like"
                     /note="Peptidase associated domain: C-terminal domain of
                     M14 N/E carboxypeptidase; putative folding, regulation, or
                     interaction domain; cd11308"
                     /db_xref="CDD:200604"
     CDS             1..1117
                     /gene="AEBP1"
                     /coded_by="XM_041478626.1:49..3402"
                     /db_xref="GeneID:121359589"
ORIGIN      
        1 mvpagpprsc llltaallpl lpvpapgaap gppaltdaei eeflrgflgp gdggdrdgdr
       61 dgdgtelsfg tdlstgtgtg apeplpepek prkgkkekpp kkpkerprgp kkdkdkdker
      121 gknkppkksk ekppkgsekt pkgsektpkg sekspkgskk pkekppkatk psgkkppvpp
      181 spptiqqpsq gkedeeipef lepshkeeee dggvrgelee ppnerwglgr edwspepqpe
      241 vpeepepptl dyneqlered yedfefirrq qkppkppgrr rpervwpqpe etnvcmvrev
      301 acsrggchtp sicgtflgwv acswdwchlp gvgvtsptak pkkeeeeeee rwveekgqdr
      361 kgkpkkpggk kwdpdeeewt ppaekkrcpp igleshried dqilassmlr hglgaqrgrl
      421 nmqagtnedd ffdgawcaed dsrahwlevd trrvtmftgv itqgrdsqih ddfvtsfyvg
      481 fsndsqhwvm ysngyeemmf ygnvdkdtpv lsefpepvva ryiriypqrw ngslclrlev
      541 lgcplsavss yytqqnevts tdnldfrhhs ykdmrqlmkv vneecptitr iynigkssrg
      601 lkiyamevsd npgehetgep efrytaglhg nealgrelll llmqflckey qdgnprvrgl
      661 vtdtrihlvp slnpdgyela heagselgnw alghwteegf dlfenfpdla salwaaeerr
      721 lvphqfpnhh ipipehylse daavavetra vmawmdknpf vlganlqgge klvsfpfdta
      781 rpspptpaaa prpldyeder pelqetpdha vfrwlaisya sahltmaetf rggchtqdvt
      841 damgivqgak wrpragsmnd fsylhtncle lsiylgcdkf pheselqqew ennkeslltf
      901 meqihrgikg vvtdqqgepi anativvggi nhnvrtasgg dywrilnpge yrvsaraegy
      961 npsvktchvl ydigatqcnf vlsrsnwkri reimamngnr pirrvvpgrp mtprerlrlr
     1021 lrhrmrlreq mrlrrlnatt atsgptappp ttalpfpfss taytpwsqep ptagtwemdt
     1081 etevvtelvt etegwelhtg taqplttaet ytvnfgd
//
LOCUS       XP_041334573             323 aa            linear   VRT 06-MAY-2021
DEFINITION  drebrin-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041334573
VERSION     XP_041334573.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478639.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="drebrin-like protein"
                     /calculated_mol_wt=36854
     Region          <1..86
                     /region_name="ADF_drebrin_like"
                     /note="ADF homology domain of drebrin and actin-binding
                     protein 1 (abp1); cd11281"
                     /db_xref="CDD:200437"
     Site            order(26,40,67,70)
                     /site_type="other"
                     /note="putative F-actin interface [polypeptide binding]"
                     /db_xref="CDD:200437"
     Region          268..321
                     /region_name="SH3_Abp1_eu"
                     /note="Src homology 3 domain of eumetazoan Actin-binding
                     protein 1; cd11960"
                     /db_xref="CDD:212893"
     Site            order(273,275,278,281..282,300..301,313,315,317..318)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212893"
     CDS             1..323
                     /gene="DBNL"
                     /coded_by="XM_041478639.1:71..1042"
                     /db_xref="GeneID:121359594"
ORIGIN      
        1 mleelssgkv mygfcrvtdp nsglpkyvlv nwtgegvsdv rkgacanhvs tvanflkgah
       61 vtinaraeed vepelimqkv aqasganysf hkesskfqds gpqapvgsvy qktnamseik
      121 rvnkdnfwak aerdeeerra eerrraeeqr qrlererrqr elqeaagreq rcqarareie
      181 ahrrlqqqqe aenrdreqqq wspgfspgrd sgynsgvpgs qveenlyeep pepsaiyeep
      241 pqeqvddaky dyrveyqepp dlagkglcar alydyqaadd teisfdpeni ithiemideg
      301 wwrgygpdgh fgmfpanyve lie
//
LOCUS       XP_041334587             814 aa            linear   VRT 06-MAY-2021
DEFINITION  vitamin K-dependent gamma-carboxylase [Pyrgilauda ruficollis].
ACCESSION   XP_041334587
VERSION     XP_041334587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478653.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..814
                     /product="vitamin K-dependent gamma-carboxylase"
                     /calculated_mol_wt=91613
     Region          102..574
                     /region_name="VKG_Carbox"
                     /note="Vitamin K-dependent gamma-carboxylase; pfam05090"
                     /db_xref="CDD:461546"
     Region          <625..673
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cd02208"
                     /db_xref="CDD:380338"
     CDS             1..814
                     /gene="GGCX"
                     /coded_by="XM_041478653.1:123..2567"
                     /db_xref="GeneID:121359598"
ORIGIN      
        1 mgcgpiapps saligcrdcy vrrggaaama aaaaaagpar rrrpereeaa epppsptgsp
       61 kcsgtgpgla rrllgfelrd ltrwqrfvrl lhrpqdpaal gafraafgll maldvpqerg
      121 lghldqryld glevcrfpll pflaplpldw myllytvmfl galgimlgcc yrlscvaflc
      181 pywylllldk tswnnhsyly gllgfqlall gadrygsvdg lfrprkrnah vplwnyallr
      241 aqvgvpapgp prdpppgppr eggtgggfgv rmrrgtgggf gvrmrnvtps rrkvrevmgw
      301 gwggadaeeg svarlvlsee ltsrlvvhgg glvldlsagf llffdatrpl alvfvtyfhc
      361 mnsqlfsigm fsytmlatng lfcrpewprg lvarcpprlq awlpstkppq pspdchyggr
      421 rargglrprq hlaaaftily vleqlflpys hfitqgynnw tnglygyswd mmvhsrfhqh
      481 vkityrdglt gevgylkpga ftqsrrwrdh admlkqysac lsrllpryni sqpqiyfdvw
      541 vsinerfqqr lvdprvdlvr apwspwtptp wllpllvdls pwrqrlqele aqldghtdtv
      601 fiadfpglhl enfvsedlgn tslrvlrgqv lvelveqqqn hslqegeamq lpagqyhkvh
      661 tvspepscym ylyvnttale leqkltrlre lrervrngte qsplppelrp llgeplpaga
      721 pldplvslfl rreqrqqrre rqsspaqrlr rflrrkfflf rrsalmtlia lrnlalgrps
      781 perlaqevaf aswrgeeeea qpeadggaqr gpel
//
LOCUS       XP_041334601             314 aa            linear   VRT 06-MAY-2021
DEFINITION  pulmonary surfactant-associated protein B [Pyrgilauda ruficollis].
ACCESSION   XP_041334601
VERSION     XP_041334601.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478667.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="pulmonary surfactant-associated protein B"
                     /calculated_mol_wt=33060
     Region          59..132
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     Region          284..313
                     /region_name="SapA"
                     /note="Saposin A-type domain; pfam02199"
                     /db_xref="CDD:460487"
     CDS             1..314
                     /gene="SFTPB"
                     /coded_by="XM_041478667.1:184..1128"
                     /db_xref="GeneID:121359604"
ORIGIN      
        1 malalpllla llgttpglga pgggcgvpps awcqdwvtal rcgalgrcph ltqgppevdt
       61 caicqhfvdf lrqisnqtav eevlehvvgl vcphlplvei pcqqlvkwlv hqllrdlqhl
      121 kprevcaklq lcpaepgaal alpvlevpgs hlqgsglspq alplplcwlc rslvaraeaa
      181 vpvgsvaaav aglcralplp vagacqclae ryaalalerl lgrlgprllc rlflacrsgd
      241 sgdsehagtl pppwvletiv vrladcvree dpkgaavpal slgpcalgpi fwcsgpeaar
      301 rcqalqhcre hvwl
//
LOCUS       XP_041334613             135 aa            linear   VRT 06-MAY-2021
DEFINITION  max dimerization protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041334613
VERSION     XP_041334613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478679.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..135
                     /product="max dimerization protein 1-like"
                     /calculated_mol_wt=14517
     Region          <14..51
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     CDS             1..135
                     /gene="LOC121359609"
                     /coded_by="XM_041478679.1:1..408"
                     /db_xref="GeneID:121359609"
ORIGIN      
        1 msggskgipg npglrapcsp qkledqerra lhqieqlqre qrhlqrqlek lgmervrids
       61 igsslssers dsdqemdvdv estddlpael dwsssspsds dergslqslg sdegysssgg
      121 ararlpgsrk lpagi
//
LOCUS       XP_041334625             577 aa            linear   VRT 06-MAY-2021
DEFINITION  anthrax toxin receptor 1, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041334625
VERSION     XP_041334625.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478691.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>577
                     /product="anthrax toxin receptor 1"
     Region          39..223
                     /region_name="vWA_ATR"
                     /note="ATR (Anthrax Toxin Receptor): Anthrax toxin is a
                     key virulence factor for Bacillus anthracis, the causative
                     agent of anthrax. ATR is the cellular receptor for the
                     anthrax protective antigen and facilitates entry of the
                     toxin into cells. The VWA domain in...; cd01474"
                     /db_xref="CDD:238751"
     Site            order(50,52,54,118,150)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238751"
     Region          218..319
                     /region_name="Anth_Ig"
                     /note="Anthrax receptor extracellular domain; pfam05587"
                     /db_xref="CDD:461684"
     Region          <516..552
                     /region_name="Ant_C"
                     /note="Anthrax receptor C-terminus region; pfam05586"
                     /db_xref="CDD:461683"
     CDS             1..577
                     /gene="ANTXR1"
                     /coded_by="XM_041478691.1:183..>1913"
                     /db_xref="GeneID:121359620"
ORIGIN      
        1 maiakqsilr fgfqcaflav ftltcdghgg krenggpacy ggfdlyfild ksgsvlhhwn
       61 eiyhfvehla rkfispqlrm sfivfstrgt ilmrltedre qirqgleelq kvlpggdtym
      121 hegferaseq iyyenvhgyr tasviialtd gelhedlffy sereanrsrd lgatvycvgv
      181 kdfnetqlar iadsrdhvfp vndgfealqg iidsilkksc ieilaaepss icagesfqvv
      241 vrgngfrhar nvdrvlcsfr indtltlnek pfvvedtyll cpapvlrevg meaalqvsmn
      301 dglsfisssv iissthcsdg tilaiallil flllalallw wfwplcctvi ikepppppae
      361 dseeedddgl pkkkwptvda syyggrgvgg ikrmeiltlt likililtlm ltlililslt
      421 lilililiqi ltltlilils ltltpiltlt ltltpilslt liltliltlt pilililtps
      481 ltptlilila avaswahrql qrclclspag prstegklda lwvllrkgyd rvsvmrpqpg
      541 dkgrcinftr vknvetppky plnnsypsap ppapiyt
//
LOCUS       XP_041334638             361 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: gastrokine-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334638
VERSION     XP_041334638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478704.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 3% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="LOW QUALITY PROTEIN: gastrokine-1"
                     /calculated_mol_wt=40642
     Region          87..174
                     /region_name="BRICHOS"
                     /note="BRICHOS domain; pfam04089"
                     /db_xref="CDD:461168"
     Region          240..326
                     /region_name="BRICHOS"
                     /note="BRICHOS domain; pfam04089"
                     /db_xref="CDD:461168"
     CDS             1..361
                     /gene="GKN1"
                     /coded_by="XM_041478704.1:46..1131"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121359625"
ORIGIN      
        1 mcsglttyka yevhasqgpq lnlgscitld vlgvvdlkyc tgnfhgngqs qqtgnnchfs
       61 gacvyqnmtl ssqtreviie qrseqfswkt iwnynmdiia tkvvqertcy istmnrnemp
      121 tfdaliryas enknqvglgr ptkkitfvtn glvsnlnsyg rditamcsgl ttymatevhn
      181 akgvggshhl fclltpalad yhqqtevskk isisggyqim tlnrkwlvas ieqktnheyw
      241 ktiwnydtgf matkvlpera cyvsimnrte mpsfdalpql aadirnqnrp rppakeitft
      301 lirrtirdle sygpdifsmc rglstyvgye vhepqsnlgs clkldvlqyl altychndnf
      361 v
//
LOCUS       XP_041334649             820 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334649
VERSION     XP_041334649.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478715.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..820
                     /product="fibroblast growth factor receptor 1 isoform X1"
                     /calculated_mol_wt=91742
     Region          25..117
                     /region_name="IgI_1_FGFR"
                     /note="First immunoglobulin (Ig)-like domain of fibroblast
                     growth factor receptor (FGFR); member of the I-set of Ig
                     superfamily (IgSF) domains; cd04973"
                     /db_xref="CDD:409362"
     Region          25..28
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409362"
     Region          39..45
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409362"
     Region          48..58
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409362"
     Region          62..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409362"
     Region          70..72
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409362"
     Region          77..81
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409362"
     Region          84..89
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409362"
     Region          95..104
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409362"
     Region          107..117
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409362"
     Region          151..245
                     /region_name="IgI_2_FGFR"
                     /note="Second immunoglobulin (Ig)-like domain of
                     fibroblast growth factor (FGF) receptor; member of the
                     I-set of IgSF domains; cd05857"
                     /db_xref="CDD:409443"
     Region          151..154
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409443"
     Region          162..167
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409443"
     Site            order(163,165,167)
                     /site_type="other"
                     /note="FGF binding site [polypeptide binding]"
                     /db_xref="CDD:409443"
     Site            order(164,171..173,175)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409443"
     Region          171..179
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409443"
     Region          185..190
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409443"
     Region          193..195
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409443"
     Region          204..207
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409443"
     Region          211..216
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409443"
     Region          225..232
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409443"
     Region          235..245
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409443"
     Region          253..357
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          271..275
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          284..288
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..326
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          336..341
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          349..352
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          462..763
                     /region_name="PTKc_FGFR1"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fibroblast Growth Factor Receptor 1; cd05098"
                     /db_xref="CDD:270678"
     Site            order(482..483,485,487,490,510,512,543,559..562,566,621,
                     625..626,628,639,657..661,670,704)
                     /site_type="active"
                     /db_xref="CDD:270678"
     Site            order(482..483,485,487,490,510,512,543,559..562,566,
                     625..626,628,639)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270678"
     Site            order(621,625,657..661,670,704)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270678"
     Site            638..663
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270678"
     CDS             1..820
                     /gene="FGFR1"
                     /coded_by="XM_041478715.1:286..2748"
                     /db_xref="GeneID:121359634"
ORIGIN      
        1 mwtwrclflw avlvaaalsa arpaptlpeq alpkakieve sysahpgell qlrcrlrddv
       61 qsinwvrdgi qlaennrtri tgdevevrdv vpedsglyac mtnspsgset tyfsvnisda
      121 lpsaedddde ddssseekea dntkpnqaia pywtypekme kklhavpaak tvkfkcpssg
      181 tpnptlrwlk ngkefkpdhr iggykvrqat wsiimdsvvp sdkgnytciv enkygsinht
      241 yqldvversp hrpilqaglp anktvalgsn vefvckvysd pqphiqwlkh ievngskigp
      301 dnlpyvqilk tagvnttdke mevlhlrnvs fedageytcl agnsigishh sawltvleai
      361 edtpammtsp fyleiiiyci gafliscmvv tiiiyklkst tkktdfnsql avhklaksip
      421 lrrqvtvsad ssssmnsgvm lvrpsrlsss gtpmlagvse yelpedprwe lprdrlilgk
      481 plgegcfgqv vlaeaigldk dkpnrvtkva vkmlksdate kdlsdlisem emmkmigkhk
      541 niinllgact qdgplyvive yaskgnlrey lqarrppgme ycynptrvpe eqlsfkdlvs
      601 cayqvargme ylaskkcihr dlaarnvlvt ednvmkiadf glardihhid yykkttngrl
      661 pvkwmapeal fdriythqsd vwsfgvllwe iftlggspyp gvpveelfkl lkeghrmdkp
      721 snctnelymm mrdcwhavps qrptfkqlve dldrivamts nqeyldlsmp ldqyspgfpd
      781 trsstcssge dsvfshdplp depclpklpp qhsngglkrh
//
LOCUS       XP_041334658             818 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334658
VERSION     XP_041334658.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478724.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..818
                     /product="fibroblast growth factor receptor 1 isoform X2"
                     /calculated_mol_wt=91542
     Region          25..117
                     /region_name="IgI_1_FGFR"
                     /note="First immunoglobulin (Ig)-like domain of fibroblast
                     growth factor receptor (FGFR); member of the I-set of Ig
                     superfamily (IgSF) domains; cd04973"
                     /db_xref="CDD:409362"
     Region          25..28
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409362"
     Region          39..45
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409362"
     Region          48..58
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409362"
     Region          62..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409362"
     Region          70..72
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409362"
     Region          77..81
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409362"
     Region          84..89
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409362"
     Region          95..104
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409362"
     Region          107..117
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409362"
     Region          151..245
                     /region_name="IgI_2_FGFR"
                     /note="Second immunoglobulin (Ig)-like domain of
                     fibroblast growth factor (FGF) receptor; member of the
                     I-set of IgSF domains; cd05857"
                     /db_xref="CDD:409443"
     Region          151..154
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409443"
     Region          162..167
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409443"
     Site            order(163,165,167)
                     /site_type="other"
                     /note="FGF binding site [polypeptide binding]"
                     /db_xref="CDD:409443"
     Site            order(164,171..173,175)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409443"
     Region          171..179
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409443"
     Region          185..190
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409443"
     Region          193..195
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409443"
     Region          204..207
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409443"
     Region          211..216
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409443"
     Region          225..232
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409443"
     Region          235..245
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409443"
     Region          253..357
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          271..275
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          284..288
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..326
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          336..341
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          349..352
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          460..761
                     /region_name="PTKc_FGFR1"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fibroblast Growth Factor Receptor 1; cd05098"
                     /db_xref="CDD:270678"
     Site            order(480..481,483,485,488,508,510,541,557..560,564,619,
                     623..624,626,637,655..659,668,702)
                     /site_type="active"
                     /db_xref="CDD:270678"
     Site            order(480..481,483,485,488,508,510,541,557..560,564,
                     623..624,626,637)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270678"
     Site            order(619,623,655..659,668,702)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270678"
     Site            636..661
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270678"
     CDS             1..818
                     /gene="FGFR1"
                     /coded_by="XM_041478724.1:286..2742"
                     /db_xref="GeneID:121359634"
ORIGIN      
        1 mwtwrclflw avlvaaalsa arpaptlpeq alpkakieve sysahpgell qlrcrlrddv
       61 qsinwvrdgi qlaennrtri tgdevevrdv vpedsglyac mtnspsgset tyfsvnisda
      121 lpsaedddde ddssseekea dntkpnqaia pywtypekme kklhavpaak tvkfkcpssg
      181 tpnptlrwlk ngkefkpdhr iggykvrqat wsiimdsvvp sdkgnytciv enkygsinht
      241 yqldvversp hrpilqaglp anktvalgsn vefvckvysd pqphiqwlkh ievngskigp
      301 dnlpyvqilk tagvnttdke mevlhlrnvs fedageytcl agnsigishh sawltvleai
      361 edtpammtsp fyleiiiyci gafliscmvv tiiiyklkst tkktdfnsql avhklaksip
      421 lrrqvsadss ssmnsgvmlv rpsrlsssgt pmlagvseye lpedprwelp rdrlilgkpl
      481 gegcfgqvvl aeaigldkdk pnrvtkvavk mlksdatekd lsdlisemem mkmigkhkni
      541 inllgactqd gplyviveya skgnlreylq arrppgmeyc ynptrvpeeq lsfkdlvsca
      601 yqvargmeyl askkcihrdl aarnvlvted nvmkiadfgl ardihhidyy kkttngrlpv
      661 kwmapealfd riythqsdvw sfgvllweif tlggspypgv pveelfkllk eghrmdkpsn
      721 ctnelymmmr dcwhavpsqr ptfkqlvedl drivamtsnq eyldlsmpld qyspgfpdtr
      781 sstcssgeds vfshdplpde pclpklppqh sngglkrh
//
LOCUS       XP_041334667             732 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334667
VERSION     XP_041334667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="fibroblast growth factor receptor 1 isoform X3"
                     /calculated_mol_wt=81947
     Region          63..157
                     /region_name="IgI_2_FGFR"
                     /note="Second immunoglobulin (Ig)-like domain of
                     fibroblast growth factor (FGF) receptor; member of the
                     I-set of IgSF domains; cd05857"
                     /db_xref="CDD:409443"
     Region          63..66
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409443"
     Region          74..79
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409443"
     Site            order(75,77,79)
                     /site_type="other"
                     /note="FGF binding site [polypeptide binding]"
                     /db_xref="CDD:409443"
     Site            order(76,83..85,87)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409443"
     Region          83..91
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409443"
     Region          97..102
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409443"
     Region          105..107
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409443"
     Region          116..119
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409443"
     Region          123..128
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409443"
     Region          137..144
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409443"
     Region          147..157
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409443"
     Region          165..269
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          183..187
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          196..200
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          234..238
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          248..253
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          261..264
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          374..675
                     /region_name="PTKc_FGFR1"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fibroblast Growth Factor Receptor 1; cd05098"
                     /db_xref="CDD:270678"
     Site            order(394..395,397,399,402,422,424,455,471..474,478,533,
                     537..538,540,551,569..573,582,616)
                     /site_type="active"
                     /db_xref="CDD:270678"
     Site            order(394..395,397,399,402,422,424,455,471..474,478,
                     537..538,540,551)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270678"
     Site            order(533,537,569..573,582,616)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270678"
     Site            550..575
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270678"
     CDS             1..732
                     /gene="FGFR1"
                     /coded_by="XM_041478733.1:286..2484"
                     /db_xref="GeneID:121359634"
ORIGIN      
        1 mwtwrclflw avlvaaalsa arpaptlpeq dalpsaeddd deddssseek eadntkpnqa
       61 iapywtypek mekklhavpa aktvkfkcps sgtpnptlrw lkngkefkpd hriggykvrq
      121 atwsiimdsv vpsdkgnytc ivenkygsin htyqldvver sphrpilqag lpanktvalg
      181 snvefvckvy sdpqphiqwl khievngski gpdnlpyvqi lktagvnttd kemevlhlrn
      241 vsfedageyt clagnsigis hhsawltvle aiedtpammt spfyleiiiy cigafliscm
      301 vvtiiiyklk sttkktdfns qlavhklaks iplrrqvtvs adssssmnsg vmlvrpsrls
      361 ssgtpmlagv seyelpedpr welprdrlil gkplgegcfg qvvlaeaigl dkdkpnrvtk
      421 vavkmlksda tekdlsdlis ememmkmigk hkniinllga ctqdgplyvi veyaskgnlr
      481 eylqarrppg meycynptrv peeqlsfkdl vscayqvarg meylaskkci hrdlaarnvl
      541 vtednvmkia dfglardihh idyykkttng rlpvkwmape alfdriythq sdvwsfgvll
      601 weiftlggsp ypgvpveelf kllkeghrmd kpsnctnely mmmrdcwhav psqrptfkql
      661 vedldrivam tsnqeyldls mpldqyspgf pdtrsstcss gedsvfshdp lpdepclpkl
      721 ppqhsngglk rh
//
LOCUS       XP_041334676             730 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334676
VERSION     XP_041334676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="fibroblast growth factor receptor 1 isoform X4"
                     /calculated_mol_wt=81747
     Region          63..157
                     /region_name="IgI_2_FGFR"
                     /note="Second immunoglobulin (Ig)-like domain of
                     fibroblast growth factor (FGF) receptor; member of the
                     I-set of IgSF domains; cd05857"
                     /db_xref="CDD:409443"
     Region          63..66
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409443"
     Region          74..79
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409443"
     Site            order(75,77,79)
                     /site_type="other"
                     /note="FGF binding site [polypeptide binding]"
                     /db_xref="CDD:409443"
     Site            order(76,83..85,87)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:409443"
     Region          83..91
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409443"
     Region          97..102
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409443"
     Region          105..107
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409443"
     Region          116..119
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409443"
     Region          123..128
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409443"
     Region          137..144
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409443"
     Region          147..157
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409443"
     Region          165..269
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          183..187
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          196..200
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          234..238
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          248..253
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          261..264
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          372..673
                     /region_name="PTKc_FGFR1"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fibroblast Growth Factor Receptor 1; cd05098"
                     /db_xref="CDD:270678"
     Site            order(392..393,395,397,400,420,422,453,469..472,476,531,
                     535..536,538,549,567..571,580,614)
                     /site_type="active"
                     /db_xref="CDD:270678"
     Site            order(392..393,395,397,400,420,422,453,469..472,476,
                     535..536,538,549)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270678"
     Site            order(531,535,567..571,580,614)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270678"
     Site            548..573
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270678"
     CDS             1..730
                     /gene="FGFR1"
                     /coded_by="XM_041478742.1:286..2478"
                     /db_xref="GeneID:121359634"
ORIGIN      
        1 mwtwrclflw avlvaaalsa arpaptlpeq dalpsaeddd deddssseek eadntkpnqa
       61 iapywtypek mekklhavpa aktvkfkcps sgtpnptlrw lkngkefkpd hriggykvrq
      121 atwsiimdsv vpsdkgnytc ivenkygsin htyqldvver sphrpilqag lpanktvalg
      181 snvefvckvy sdpqphiqwl khievngski gpdnlpyvqi lktagvnttd kemevlhlrn
      241 vsfedageyt clagnsigis hhsawltvle aiedtpammt spfyleiiiy cigafliscm
      301 vvtiiiyklk sttkktdfns qlavhklaks iplrrqvsad ssssmnsgvm lvrpsrlsss
      361 gtpmlagvse yelpedprwe lprdrlilgk plgegcfgqv vlaeaigldk dkpnrvtkva
      421 vkmlksdate kdlsdlisem emmkmigkhk niinllgact qdgplyvive yaskgnlrey
      481 lqarrppgme ycynptrvpe eqlsfkdlvs cayqvargme ylaskkcihr dlaarnvlvt
      541 ednvmkiadf glardihhid yykkttngrl pvkwmapeal fdriythqsd vwsfgvllwe
      601 iftlggspyp gvpveelfkl lkeghrmdkp snctnelymm mrdcwhavps qrptfkqlve
      661 dldrivamts nqeyldlsmp ldqyspgfpd trsstcssge dsvfshdplp depclpklpp
      721 qhsngglkrh
//
LOCUS       XP_041334690            1137 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G protein-coupled receptor A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334690
VERSION     XP_041334690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478756.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1137
                     /product="adhesion G protein-coupled receptor A2"
                     /calculated_mol_wt=123904
     Region          1..>69
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          94..183
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          102..106
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409570"
     Region          115..120
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409570"
     Region          144..153
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409570"
     Region          163..168
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409570"
     Region          176..179
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409570"
     Region          189..256
                     /region_name="HRM"
                     /note="Hormone receptor domain; cl02422"
                     /db_xref="CDD:413313"
     Region          530..574
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          589..894
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          591..615
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320664"
     Region          627..648
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320664"
     Region          658..680
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320664"
     Region          708..724
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320664"
     Region          743..766
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320664"
     Region          828..850
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320664"
     Region          857..882
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320664"
     CDS             1..1137
                     /gene="ADGRA2"
                     /coded_by="XM_041478756.1:141..3554"
                     /db_xref="GeneID:121359653"
ORIGIN      
        1 msgnifsslp pgvfdelpsl kvvdfateyl tcdcnlrwvl rwarerpaqi sertacsfpr
       61 qlrgvalrga rdgqlrcaga pelhthhlip slrqvvfqgd rlpfqctaty ldnstqirwf
      121 hnrepvrede qtgviveesl ihdctfitse lilsnihvsa ngewecavst sqgnvskkve
      181 ivvletsasy cpaervtnnr gdfrwprtla gitafqpclq hpfaagpagv gsagekqawr
      241 rcdrsgrwed gdyshclytn ditrvlytfv lmpinasnal tlahqlrvyt aeaanfsdmv
      301 dvlyvaqmie kfigyvdqik qltdvivema snimlvddhi lwmsqkeeka cssivrsler
      361 iaahtlgsns qhmavnsrni afeayvvkpe syvglscvaf qrwdgtgtpp grppqaerga
      421 eptpdqqlrl rcttgrpnis ltsfhiklpp slfaspgpap pgadcklqll vfrngklfcs
      481 tgnssrladd gkrrsvatpv iyagtygcgv gnlsepvavs lrhpgegtdp vaaywnfevl
      541 ggmggwsaeg cqlasrepnv tslhcrhlsn vavlmelsgf pseaqgavev lhpamytcta
      601 vlllclftti ityivhhgti liprkgwhml lnlcfhiamt aavfaggitl tgyravcqav
      661 giilhyssls tllwmavkar vlykeltwka pqqadrdtsq aaprpmlrfy liaggiplii
      721 cgitaavniq nyhdnnpycw lvwrpslgaf yvpvafillv twiyflcagl slqcrpshqk
      781 dipepleppp rlgaagdllt dsgsisvtln sgppcpegdg vyslrvqfwa lvathalyva
      841 lwtfgamavs qrwylsivfs clygvtaval glfifihhcl rrrdvlsswf sccpsyrnal
      901 pmqayvhpgl gpedgsqvfi gcepeaarsg assssspssa gsaggrcklt nlqvaqsqae
      961 srpapcpepd aadgkpvrht snlhgrrshr grtkpcrdgk hhrlkmlrgp sehpssesgs
     1021 lhnshsesyp sgrtspgsgg ragprvpqdg davpspsegs dggrrvpdfa earrrsgsrd
     1081 nlrpgggaer eakrrsypln vgshngglkg skydinlasa dsvagmktgl wksettv
//
LOCUS       XP_041334703             572 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor IIIB 50 kDa subunit [Pyrgilauda ruficollis].
ACCESSION   XP_041334703
VERSION     XP_041334703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..572
                     /product="transcription factor IIIB 50 kDa subunit"
                     /calculated_mol_wt=61129
     Region          6..233
                     /region_name="SUA7"
                     /note="Transcription initiation factor TFIIIB, Brf1
                     subunit/Transcription initiation factor TFIIB
                     [Transcription]; COG1405"
                     /db_xref="CDD:441015"
     Region          66..162
                     /region_name="CYCLIN_BRF2"
                     /note="cyclin box found in B-related factor 2 (BRF-2) and
                     similar proteins; cd20555"
                     /db_xref="CDD:410258"
     Site            order(66,68,105,107..111,113..114,127,134..135,147,150,
                     153..154,158)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410258"
     Region          <336..519
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..572
                     /gene="BRF2"
                     /coded_by="XM_041478769.1:7..1725"
                     /db_xref="GeneID:121359659"
ORIGIN      
        1 maargrcpec gseslvedah yaqqqlvcaa cgcvlsegll tttytdeehl revaysqstg
       61 qkeqlsrclq rgirrvqdlc kvlqlpatfe etavsyfqra lqlpafhlvs lekkellggc
      121 cvlvtcrqhr wpltmgtvcs llyakqelfa svflslqkel glsvpalsla dlvtthlssf
      181 rlvqptasvp apfledkekl lartmaivel asetwlvtgr hpvpvvtaaa flawqslrpg
      241 prlscplarf crlagvelpp pahlrlrell eillgmasql swlrafrldk ktvvkhigdl
      301 lqhrvfllkh afsqqdgqeq qgtglglgsg sqdcqdsgsq gclgqdsvsl gcldkdsvnk
      361 dspsqgcpgq dsesqsclgq gsvsqgsldk dspgqsspdq dsesqscpaq gsvsqgsldk
      421 dcpsqgpldk dcpsqgpldk dcpsqgcpgq gsvsqgsldk dcpsqgcpgq gsldkdsvnk
      481 dspgqgcpgq aplsspalaq qqgspwagkq qrggtlrpll ppclihprkr lraaapsapa
      541 vtgdepisds eieqylrspe eirafskaka wl
//
LOCUS       XP_041334715             342 aa            linear   VRT 06-MAY-2021
DEFINITION  erlin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334715
VERSION     XP_041334715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="erlin-2"
                     /calculated_mol_wt=37718
     Region          23..308
                     /region_name="SPFH_like_u3"
                     /note="Uncharacterized family; SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cd03406"
                     /db_xref="CDD:259804"
     CDS             1..342
                     /gene="ERLIN2"
                     /coded_by="XM_041478781.1:28..1056"
                     /db_xref="GeneID:121359668"
ORIGIN      
        1 maqlgaiaal algvaaaall savhkidegh igvyyrggal ltstsgpgfh lmlpfitsyk
       61 svqttlqtde vknvpcgtsg gvmiyfdrie vvnfliqsav ydivknytad ydkalifnki
      121 hhelnqfcsa htlqevyiel fdqidenlkl alqqdlttma pgliiqavrv tkpnipetir
      181 rnyelmesek tklliaaqkq kvvekeaete rkkalieaek iaqvaeityg qkvmeketek
      241 riseiedaaf larekarada ecytamkvae anklkltpey lqlmkykaia anskiyfgkd
      301 ipnmfmdsag sqsksaegla egiqeedgag tsedtkllhn in
//
LOCUS       XP_041334728            1258 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334728
VERSION     XP_041334728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1258
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1258
                     /product="AP2-associated protein kinase 1 isoform X1"
                     /calculated_mol_wt=135279
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          1055..1253
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1258
                     /gene="AAK1"
                     /coded_by="XM_041478794.1:354..4130"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp eklieglksp epalllpell
      781 pladpfgsta dtangkaava veslipglea plaqrlvshs esvastrtds ltgedslldc
      841 sllsnpaadl vdefapvaft aqphkedtnl isgfdapegs ekvtedefdp ipvlisknsq
      901 glhrdpgrfp aaalelckgd pgsdgltlyk gqpemlevkv qhnseseyla rdgpssnssf
      961 yssegegtdh egdildcsgs rpllmdseee eetcklcpgf lqpvprheas kedpqsqara
     1021 geplfpafqs hsgevfnepd vfatapfrss rkvpdevdvf tkapfickgs aalrhpeead
     1081 vflrapftkk rsveeltshk epftppvfls qggdgraqpm fldpaahgsv aslraphppa
     1141 gfaqpgnlhp csvraveaqe sspakaalpe qgdalgsvan kpfrpqslsk ysrhygpedg
     1201 pgleakpiaa ykvvsqtnrq aiagsvslvp lsarttelpg adpfasapfp skaakqkp
//
LOCUS       XP_041334736            1224 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334736
VERSION     XP_041334736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1224
                     /product="AP2-associated protein kinase 1 isoform X2"
                     /calculated_mol_wt=131852
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          1021..1219
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1224
                     /gene="AAK1"
                     /coded_by="XM_041478802.1:353..4027"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp eklieglksp epalllpell
      781 pladpfgsta dtandsltge dslldcslls npaadlvdef apvaftaqph kedtnlisgf
      841 dapegsekvt edefdpipvl isknsqglhr dpgrfpaaal elckgdpgsd gltlykgqpe
      901 mlevkvqhns eseylardgp ssnssfysse gegtdhegdi ldcsgsrpll mdseeeeetc
      961 klcpgflqpv prheaskedp qsqaragepl fpafqshsge vfnepdvfat apfrssrkvp
     1021 devdvftkap fickgsaalr hpeeadvflr apftkkrsve eltshkepft ppvflsqggd
     1081 graqpmfldp aahgsvaslr aphppagfaq pgnlhpcsvr aveaqesspa kaalpeqgda
     1141 lgsvankpfr pqslskysrh ygpedgpgle akpiaaykvv sqtnrqaiag svslvplsar
     1201 ttelpgadpf asapfpskaa kqkp
//
LOCUS       XP_041334744            1223 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041334744
VERSION     XP_041334744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1223
                     /product="AP2-associated protein kinase 1 isoform X3"
                     /calculated_mol_wt=131475
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          1020..1218
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1223
                     /gene="AAK1"
                     /coded_by="XM_041478810.1:353..4024"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp eklieglksp epalllpell
      781 pladpfgsta dtangkaava veslipglea plaqrlvshs esvastrtds ltgedslldc
      841 sllsnpaadl vdefapvaft aqphkglhrd pgrfpaaale lckgdpgsdg ltlykgqpem
      901 levkvqhnse seylardgps snssfysseg egtdhegdil dcsgsrpllm dseeeeetck
      961 lcpgflqpvp rheaskedpq sqarageplf pafqshsgev fnepdvfata pfrssrkvpd
     1021 evdvftkapf ickgsaalrh peeadvflra pftkkrsvee ltshkepftp pvflsqggdg
     1081 raqpmfldpa ahgsvaslra phppagfaqp gnlhpcsvra veaqesspak aalpeqgdal
     1141 gsvankpfrp qslskysrhy gpedgpglea kpiaaykvvs qtnrqaiags vslvplsart
     1201 telpgadpfa sapfpskaak qkp
//
LOCUS       XP_041334753            1192 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041334753
VERSION     XP_041334753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1192
                     /product="AP2-associated protein kinase 1 isoform X4"
                     /calculated_mol_wt=128336
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          989..1187
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1192
                     /gene="AAK1"
                     /coded_by="XM_041478819.1:352..3930"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpgk aavaveslip gleaplaqrl vshsesvast rtdsltgeds lldcsllsnp
      781 aadlvdefap vaftaqphke dtnlisgfda pegsekvted efdpipvlis knsqglhrdp
      841 grfpaaalel ckgdpgsdgl tlykgqpeml evkvqhnses eylardgpss nssfyssege
      901 gtdhegdild csgsrpllmd seeeeetckl cpgflqpvpr heaskedpqs qarageplfp
      961 afqshsgevf nepdvfatap frssrkvpde vdvftkapfi ckgsaalrhp eeadvflrap
     1021 ftkkrsveel tshkepftpp vflsqggdgr aqpmfldpaa hgsvaslrap hppagfaqpg
     1081 nlhpcsvrav eaqesspaka alpeqgdalg svankpfrpq slskysrhyg pedgpgleak
     1141 piaaykvvsq tnrqaiagsv slvplsartt elpgadpfas apfpskaakq kp
//
LOCUS       XP_041334763            1187 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041334763
VERSION     XP_041334763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1187
                     /product="AP2-associated protein kinase 1 isoform X5"
                     /calculated_mol_wt=127981
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          984..1182
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1187
                     /gene="AAK1"
                     /coded_by="XM_041478829.1:352..3915"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp eklieglksp epalllpell
      781 pladpfgsta dtanedtnli sgfdapegse kvtedefdpi pvlisknsqg lhrdpgrfpa
      841 aalelckgdp gsdgltlykg qpemlevkvq hnseseylar dgpssnssfy ssegegtdhe
      901 gdildcsgsr pllmdseeee etcklcpgfl qpvprheask edpqsqarag eplfpafqsh
      961 sgevfnepdv fatapfrssr kvpdevdvft kapfickgsa alrhpeeadv flrapftkkr
     1021 sveeltshke pftppvflsq ggdgraqpmf ldpaahgsva slraphppag faqpgnlhpc
     1081 svraveaqes spakaalpeq gdalgsvank pfrpqslsky srhygpedgp gleakpiaay
     1141 kvvsqtnrqa iagsvslvpl sarttelpga dpfasapfps kaakqkp
//
LOCUS       XP_041334771            1153 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041334771
VERSION     XP_041334771.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478837.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1153
                     /product="AP2-associated protein kinase 1 isoform X6"
                     /calculated_mol_wt=124438
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          950..1148
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1153
                     /gene="AAK1"
                     /coded_by="XM_041478837.1:351..3812"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp edtnlisgfd apegsekvte
      781 defdpipvli sknsqglhrd pgrfpaaale lckgdpgsdg ltlykgqpem levkvqhnse
      841 seylardgps snssfysseg egtdhegdil dcsgsrpllm dseeeeetck lcpgflqpvp
      901 rheaskedpq sqarageplf pafqshsgev fnepdvfata pfrssrkvpd evdvftkapf
      961 ickgsaalrh peeadvflra pftkkrsvee ltshkepftp pvflsqggdg raqpmfldpa
     1021 ahgsvaslra phppagfaqp gnlhpcsvra veaqesspak aalpeqgdal gsvankpfrp
     1081 qslskysrhy gpedgpglea kpiaaykvvs qtnrqaiags vslvplsart telpgadpfa
     1141 sapfpskaak qkp
//
LOCUS       XP_041334779            1118 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041334779
VERSION     XP_041334779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1118
                     /product="AP2-associated protein kinase 1 isoform X7"
                     /calculated_mol_wt=120634
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          915..1113
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1118
                     /gene="AAK1"
                     /coded_by="XM_041478845.1:349..3705"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp glhrdpgrfp aaalelckgd
      781 pgsdgltlyk gqpemlevkv qhnseseyla rdgpssnssf yssegegtdh egdildcsgs
      841 rpllmdseee eetcklcpgf lqpvprheas kedpqsqara geplfpafqs hsgevfnepd
      901 vfatapfrss rkvpdevdvf tkapfickgs aalrhpeead vflrapftkk rsveeltshk
      961 epftppvfls qggdgraqpm fldpaahgsv aslraphppa gfaqpgnlhp csvraveaqe
     1021 sspakaalpe qgdalgsvan kpfrpqslsk ysrhygpedg pgleakpiaa ykvvsqtnrq
     1081 aiagsvslvp lsarttelpg adpfasapfp skaakqkp
//
LOCUS       XP_041334788            1086 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041334788
VERSION     XP_041334788.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478854.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1086
                     /product="AP2-associated protein kinase 1 isoform X8"
                     /calculated_mol_wt=117234
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          883..1081
                     /region_name="BMP2K_C"
                     /note="BMP-2-inducible protein kinase C-terminus;
                     pfam15282"
                     /db_xref="CDD:464612"
     CDS             1..1086
                     /gene="AAK1"
                     /coded_by="XM_041478854.1:348..3608"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpgl hrdpgrfpaa alelckgdpg sdgltlykgq pemlevkvqh nseseylard
      781 gpssnssfys segegtdheg dildcsgsrp llmdseeeee tcklcpgflq pvprheaske
      841 dpqsqarage plfpafqshs gevfnepdvf atapfrssrk vpdevdvftk apfickgsaa
      901 lrhpeeadvf lrapftkkrs veeltshkep ftppvflsqg gdgraqpmfl dpaahgsvas
      961 lraphppagf aqpgnlhpcs vraveaqess pakaalpeqg dalgsvankp frpqslskys
     1021 rhygpedgpg leakpiaayk vvsqtnrqai agsvslvpls arttelpgad pfasapfpsk
     1081 aakqkp
//
LOCUS       XP_041334794             931 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041334794
VERSION     XP_041334794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478860.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..931
                     /product="AP2-associated protein kinase 1 isoform X9"
                     /calculated_mol_wt=100269
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <296..>421
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..931
                     /gene="AAK1"
                     /coded_by="XM_041478860.1:353..3148"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp eklieglksp epalllpell
      781 pladpfgsta dtangkaava veslipglea plaqrlvshs esvastrtds ltgedslldc
      841 sllsnpaadl vdefapvaft aqphkedtnl isgfdapegs ekvtedefdp ipvlisknsq
      901 gghsrnnsgs sesslpniar slllvdqlid l
//
LOCUS       XP_041334809             826 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334809
VERSION     XP_041334809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..826
                     /product="AP2-associated protein kinase 1 isoform X10"
                     /calculated_mol_wt=89428
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <296..>421
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..826
                     /gene="AAK1"
                     /coded_by="XM_041478875.1:349..2829"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp edtnlisgfd apegsekvte
      781 defdpipvli sknsqgghsr nnsgssessl pniarslllv dqlidl
//
LOCUS       XP_041334824             773 aa            linear   VRT 06-MAY-2021
DEFINITION  AP2-associated protein kinase 1 isoform X11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041334824
VERSION     XP_041334824.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478890.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..773
                     /product="AP2-associated protein kinase 1 isoform X11"
                     /calculated_mol_wt=83749
     Region          42..316
                     /region_name="STKc_NAK_like"
                     /note="Catalytic domain of Numb-Associated Kinase
                     (NAK)-like Serine/Threonine kinases; cd14037"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,135,176,178,
                     180..181,183,194,197,221..224)
                     /site_type="active"
                     /db_xref="CDD:270939"
     Site            order(52..56,60,72,74,104,126..129,133,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270939"
     Site            order(56,133,135,176,178,180,197,221..224)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270939"
     Site            order(193..207,208..224)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270939"
     Region          <296..>421
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..773
                     /gene="AAK1"
                     /coded_by="XM_041478890.1:347..2668"
                     /db_xref="GeneID:121359676"
ORIGIN      
        1 mkkffdsrre qggsgpgsgt sgggggssgp gsgyigrvfs igrhqvtvde vlaeggfaiv
       61 flvrtsngvk calkrmyvnn eydlqvckre iqimrdlsgh knivgyidss insvssgdvw
      121 evlilmdfcr ggqvvnlmnq rlqtgftese vlqifcdtce avarlhqckt piihrdlkve
      181 nillhdrghy vlcdfgsatn kfqnpqtegv naveeeikky ttlsyrapem vnlysgklit
      241 tkadiwalgc llyklcyftl pfgesqvaic dgnftipdns rhsqdmhcli rymlepdpdk
      301 rpdiyqvsyf afklakkecp vqnvqnspip aklpdpvkas eaaakksqpk arltdpiptt
      361 etsiaprqrp kagqtqpnpg ilpiqpaltp rkrataqaai qpqvagpaal gsaqpslpas
      421 tpqpkaapqq ppaqpqakpa aapqaqpqvp stqpqatpqh qqqqlflkqq llqqqqqqqq
      481 qqaayfqqqq qqqmmqaqqf pvmqqgapaq qqqlmqnyyq qqqqqqqlla qqaamqqktt
      541 aaaaaqqkqq pqaqpstapp aqpqeqgaqv qaqreqqqaq gqklgsltpp sspkaqragh
      601 rrilsdvths avfgvpasks tqllqaaaae aslnksksas ttpsgsprts qqnvynppdv
      661 stwnpfdddn fskltaeell nkdfaklgdg kapekagsst enlmpgfqpa aptapadafg
      721 gssfpagpae ktkdilslds spplltvpdp fiplplsdtp agprrkglcc vlc
//
LOCUS       XP_041334840             917 aa            linear   VRT 06-MAY-2021
DEFINITION  hexokinase-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334840
VERSION     XP_041334840.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478906.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..917
                     /product="hexokinase-2 isoform X1"
                     /calculated_mol_wt=102187
     Region          30..458
                     /region_name="ASKHA_NBD_HK2_meta_rpt1"
                     /note="nucleotide-binding domain (NBD) of the first repeat
                     of type II hexokinase from metazoan hexokinase (HK) domain
                     family; cd24125"
                     /db_xref="CDD:466975"
     Region          478..912
                     /region_name="ASKHA_NBD_HK2_meta_rpt2"
                     /note="nucleotide-binding domain (NBD) of the second
                     repeat of type II hexokinase from metazoan hexokinase (HK)
                     domain family; cd24128"
                     /db_xref="CDD:466978"
     CDS             1..917
                     /gene="LOC121359742"
                     /coded_by="XM_041478906.1:23..2776"
                     /db_xref="GeneID:121359742"
ORIGIN      
        1 miashllayf ftelshdqaq kvdkylyhmr lsdetllevs qrfekemekg lgadtnptas
       61 vkmlptfvrs tpdgtedgdf laldlggtnf rvlrvkvsdn glrkvemenq iyaipeelmr
      121 gsgvqlfdhi aeclanfldk lqikdkklpl gftfsfpchq tkldesilvt wtkgfkcssv
      181 egrdvvsllr ksikkrgdfd idivavvndt vgtmmtcgyd dhncevgliv gtgtnacyme
      241 emrhidlveg degrmcinme wgafgddgvl ndirtefdre idmgslnpgk qlfekmisgm
      301 ymgelvrlil vkmakegllf ggrltpdllt tghfetrfvs aiekekeglq kaheilsklg
      361 lepshedcva tlricqivst rsaalcgatl aavlrrlrdn kggdrlrstv gvdgsvykkh
      421 phfarrlhkt vrkllpdcei rfirsedgsg kgaamvtava yrlaaqhqar qkileplkls
      481 heqllevker mriemekglg ketheeatvk mlptyvcstp dgtekgdfla ldlggtnfrv
      541 llvrvrngmr rgvemhnkiy sipveimqgt geelfdhivh cisdfleymg mkgvslplgf
      601 tfsfpcqqnn ldegillkwt kgfkatgceg edvvgllkea ihrreefdld vvavvndtvg
      661 tmmtcgyedp ycevglivgt gsnacymeem rnvelvegde grmcvnmewg afgdsgcldd
      721 irtefdvavd elslnpgkqr yekmisgmyl geivrnilmd ftkkgllfrg riserlktrg
      781 ifetkflsqi esdclallqv rsilqhlgle stcddsiivk evcavvarra aqlcgagmaa
      841 vvdkirenrg ldflkitvgv dgtlyklhph fstvlqetvr elspkcevtf lqsedgsgkg
      901 aalitavacr ireagqr
//
LOCUS       XP_041334850             463 aa            linear   VRT 06-MAY-2021
DEFINITION  hexokinase-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334850
VERSION     XP_041334850.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478916.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="hexokinase-2 isoform X2"
                     /calculated_mol_wt=51461
     Region          24..458
                     /region_name="ASKHA_NBD_HK2_meta_rpt2"
                     /note="nucleotide-binding domain (NBD) of the second
                     repeat of type II hexokinase from metazoan hexokinase (HK)
                     domain family; cd24128"
                     /db_xref="CDD:466978"
     CDS             1..463
                     /gene="LOC121359742"
                     /coded_by="XM_041478916.1:166..1557"
                     /db_xref="GeneID:121359742"
ORIGIN      
        1 mvtavayrla aqhqarqkil eplklsheql levkermrie mekglgketh eeatvkmlpt
       61 yvcstpdgte kgdflaldlg gtnfrvllvr vrngmrrgve mhnkiysipv eimqgtgeel
      121 fdhivhcisd fleymgmkgv slplgftfsf pcqqnnldeg illkwtkgfk atgcegedvv
      181 gllkeaihrr eefdldvvav vndtvgtmmt cgyedpycev glivgtgsna cymeemrnve
      241 lvegdegrmc vnmewgafgd sgclddirte fdvavdelsl npgkqryekm isgmylgeiv
      301 rnilmdftkk gllfrgrise rlktrgifet kflsqiesdc lallqvrsil qhlglestcd
      361 dsiivkevca vvarraaqlc gagmaavvdk irenrgldfl kitvgvdgtl yklhphfstv
      421 lqetvrelsp kcevtflqse dgsgkgaali tavacrirea gqr
//
LOCUS       XP_041334862             859 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 2, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334862
VERSION     XP_041334862.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478928.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..859
                     /product="glycerol-3-phosphate acyltransferase 2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=92933
     Region          231..439
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     CDS             1..859
                     /gene="GPAT2"
                     /coded_by="XM_041478928.1:69..2648"
                     /db_xref="GeneID:121359751"
ORIGIN      
        1 mtppriqtwt srsgpklevf ipflgkyhrp vsgrccqtct prswvgdfgv pgcwgvlhlq
       61 gfipfflpgw ilprgpgrsr vprrqppdgg ghavpglagq eglwvpgslg venssrerrg
      121 apgadlqqqe vggsgwghpg rgwppvlail lepsslhpnt wvlgappcpa lplrvqdaas
      181 grepgsggde gsqqrckeei cqilreiqap lsplllrlch wllpklltrl flgvqlhrgq
      241 lemvlraart pevplvflcs hqspvdgpll sflllsqgig lprvtvsagt sprlrsllqr
      301 lggiflpsgm aparsdrdeg lagavldayv qevlrsrqpl vlfleepsaa lrlaeparrw
      361 llrllralrd gtvpdillvp vgiaydvapg rverdgappq plgvgsclra afqallgcqh
      421 rgcaqvdfsq pfslrefvdn nlvgpvltgn rpeqlllpti lgrspldvgt veasspssgs
      481 eeeilvtalg lhalsdsrac savtavgita alllhrhqea vllprlmwdf selleqlllr
      541 gravgfsgql ralvghslrl lqpplrppra algppeasar arlgrlaggv rhhlageavg
      601 acairallle vlpilgppss ltrivlsrde llhkilellq llpptllglq pcqppdchsl
      661 divdklilgg lleeeeaege rwgcdvaprr rfwrgqslgf fsddsdsdse hgvpkqcykv
      721 lggppaapra ggwvispksg rvppqlrepq gfpgfllflc rllspvlqty gravqflqrp
      781 pwpqpeadyv ealleflaed edgypdrsla lsslqsfkdm gvleelqtpt gpalqlsqpf
      841 qsasnrekla afihqftql
//
LOCUS       XP_041334871             833 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 2, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334871
VERSION     XP_041334871.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478937.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..833
                     /product="glycerol-3-phosphate acyltransferase 2,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=90399
     Region          231..439
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     CDS             1..833
                     /gene="GPAT2"
                     /coded_by="XM_041478937.1:69..2570"
                     /db_xref="GeneID:121359751"
ORIGIN      
        1 mtppriqtwt srsgpklevf ipflgkyhrp vsgrccqtct prswvgdfgv pgcwgvlhlq
       61 gfipfflpgw ilprgpgrsr vprrqppdgg ghavpglagq eglwvpgslg venssrerrg
      121 apgadlqqqe vggsgwghpg rgwppvlail lepsslhpnt wvlgappcpa lplrvqdaas
      181 grepgsggde gsqqrckeei cqilreiqap lsplllrlch wllpklltrl flgvqlhrgq
      241 lemvlraart pevplvflcs hqspvdgpll sflllsqgig lprvtvsagt sprlrsllqr
      301 lggiflpsgm aparsdrdeg lagavldayv qevlrsrqpl vlfleepsaa lrlaeparrw
      361 llrllralrd gtvpdillvp vgiaydvapg rverdgappq plgvgsclra afqallgcqh
      421 rgcaqvdfsq pfslrefvdn nlvgpvltgn rpeqlllpti lgrspldvgt veasspssgs
      481 eeeilvtalg lhalsdsrac savtavgita alllhrhqea vllprlmwdf selleqlllr
      541 gravgfsgql ralvghslrl lqpplrppra algppeasar arlgrlaggv rhhlageavg
      601 acairallle vlpilgppss ltrivlsrde llhkilellq llpptllglq pcqppdchsl
      661 divdklilgg lleeeeaege rwgcdvaprr rfwrgqslgf fsddsdsdse hgvpkqcykl
      721 repqgfpgfl lflcrllspv lqtygravqf lqrppwpqpe adyveallef laededgypd
      781 rslalsslqs fkdmgvleel qtptgpalql sqpfqsasnr eklaafihqf tql
//
LOCUS       XP_041334880             791 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 2, mitochondrial isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334880
VERSION     XP_041334880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478946.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..791
                     /product="glycerol-3-phosphate acyltransferase 2,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=86388
     Region          100..>538
                     /region_name="PlsB"
                     /note="Glycerol-3-phosphate O-acyltransferase [Lipid
                     transport and metabolism]; COG2937"
                     /db_xref="CDD:442180"
     Region          163..371
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     CDS             1..791
                     /gene="GPAT2"
                     /coded_by="XM_041478946.1:69..2444"
                     /db_xref="GeneID:121359751"
ORIGIN      
        1 mtppriqtwt srsgpklevf ipflgkyhrp vsgrccqtct prswdgfype dlaalgfrda
       61 srlteadtrf rgwlvrrvcg flaawewkip aesagellvr icssrrvqda asgrepgsgg
      121 degsqqrcke eicqilreiq aplsplllrl chwllpkllt rlflgvqlhr gqlemvlraa
      181 rtpevplvfl cshqspvdgp llsflllsqg iglprvtvsa gtsprlrsll qrlggiflps
      241 gmaparsdrd eglagavlda yvqevlrsrq plvlfleeps aalrlaepar rwllrllral
      301 rdgtvpdill vpvgiaydva pgrverdgap pqplgvgscl raafqallgc qhrgcaqvdf
      361 sqpfslrefv dnnlvgpvlt gnrpeqlllp tilgrspldv gtveasspss gseeeilvta
      421 lglhalsdsr acsavtavgi taalllhrhq eavllprlmw dfselleqll lrgravgfsg
      481 qlralvghsl rllqpplrpp raalgppeas ararlgrlag gvrhhlagea vgacairall
      541 levlpilgpp ssltrivlsr dellhkilel lqllpptllg lqpcqppdch sldivdklil
      601 gglleeeeae gerwgcdvap rrrfwrgqsl gffsddsdsd sehgvpkqcy kvlggppaap
      661 raggwvispk sgrvppqlre pqgfpgfllf lcrllspvlq tygravqflq rppwpqpead
      721 yveallefla ededgypdrs lalsslqsfk dmgvleelqt ptgpalqlsq pfqsasnrek
      781 laafihqftq l
//
LOCUS       XP_041334895             538 aa            linear   VRT 06-MAY-2021
DEFINITION  S-adenosylmethionine synthase [Pyrgilauda ruficollis].
ACCESSION   XP_041334895
VERSION     XP_041334895.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478961.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..538
                     /product="S-adenosylmethionine synthase"
                     /calculated_mol_wt=58559
     Region          159..538
                     /region_name="PTZ00104"
                     /note="S-adenosylmethionine synthase; Provisional"
                     /db_xref="CDD:240268"
     Site            order(162..164,166,200,202,204,209,211..213,277..280,282,
                     324,326,328,345,347,386,389,400..402,404..407,410,
                     415..422,424,428,460,462..466,471..472,474)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:350837"
     Site            order(166,172..174,198,213,256,259..260,276..277,322,324,
                     349,390,392..393,395,401,407..408,422..424,428,432,434,
                     465)
                     /site_type="active"
                     /db_xref="CDD:350837"
     Site            order(166,172..173,322,324,408)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350837"
     CDS             1..538
                     /gene="MAT2A"
                     /coded_by="XM_041478961.1:16..1632"
                     /db_xref="GeneID:121359767"
ORIGIN      
        1 maaggrgrpr cpravhcaca rhsvagrmra lprassrraa reapcghhgg vrrghrcata
       61 tlpragqrtq sdrrfnsvvl aprphgpysa rhwleaaagr geeaitrgsa vgaafspslp
      121 rsgfvapvls csplppvaah raamngqlng fhevfieegt flftsesvge ghpdkicdqi
      181 sdavldahlk qdpdakvace tvaktgmill ageitsranv dyqkvvrdti rhigyddssk
      241 gfdyktcnvl valeqqspdi aqgvhldrse edigagdqgl mfgyatdete ecmpltivla
      301 hklnaklael rrsgalpwlr pdsktqvtvq ymqdrgavip irvhtivisv qhdedvclde
      361 mrdalkekvi kavvppkyld ddtiyhlqps grfviggpqg dagltgrkii vdtyggwgah
      421 gggafsgkdy tkvdrsaaya arwvakslvk aglcrrvlvq vsyaigvshp lsisifhygt
      481 sqkserelle ivkknfdlrp gvivrdldlk kplyqrtaay ghfgrdsfpw evpkklky
//
LOCUS       XP_041334909             708 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-adducin [Pyrgilauda ruficollis].
ACCESSION   XP_041334909
VERSION     XP_041334909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="beta-adducin"
                     /calculated_mol_wt=76818
     Region          127..377
                     /region_name="Aldolase_II"
                     /note="Class II Aldolase and Adducin head (N-terminal)
                     domain. Aldolases are ubiquitous enzymes catalyzing
                     central steps of carbohydrate metabolism. Based on
                     enzymatic mechanisms, this superfamily has been divided
                     into two distinct classes (Class I and II); cl00214"
                     /db_xref="CDD:469663"
     Site            order(136,140,148,173,175..176,226,228..229,234..236,244,
                     246..247,258,286,297,304,308,315,333)
                     /site_type="other"
                     /note="intersubunit interface [polypeptide binding]"
                     /db_xref="CDD:238232"
     Site            order(153,170..171,196..198,224,226,287)
                     /site_type="active"
                     /db_xref="CDD:238232"
     Site            order(224,226,287)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:238232"
     CDS             1..708
                     /gene="ADD2"
                     /coded_by="XM_041478975.1:31..2157"
                     /db_xref="GeneID:121359771"
ORIGIN      
        1 mstaaspepl peppapgprc ppqedpeflr arsgagdlrq dfnlmeqkkr vtmilqspsf
       61 reelesliqe qmkkgnnssh vwalrqiadf mattspaalp tspmglasvt pindlhgteg
      121 palakgerlm rckvgsihrl ldlygwaqlg haavtlrvsk eqehflvapq glacsevtaa
      181 slvkvnvlga vveqgstgfa pdarsfslha aiyaarpdir civrlhtpaa aavsamrcgl
      241 lpisraalll gdvayfdfrg evedeadrve lqkclgptck ilvlrnhgvl algdtaeeaf
      301 ystfhlqaac evqvsalasa ggaenlivle raaqrgphgp gavrragatf gplhksrlge
      361 hefealmrml dnlgyrtgyt yrypfvqeks kpksdvlipa tvtafvfeee pagtpalrqh
      421 aqkqqkektr wlntpntytr vnlaeepqgs aggqrtkttw lradevekgs sgtpirienp
      481 nqfvplytdp qevlemrnki reqnrqdvks agpqsqllas viaetsrsps teshlgdaea
      541 kegreetppe peppnpfsql tdqeleeykq everkkrlqg ekdaaaedsg apppeppppe
      601 ppapaepteg dkkadggqap pdstakkepp avvngkdeeq steenlgkgg tdrtttnadq
      661 dtpkeketvt snpvspdgsp skspskkkkk frtpsflkkg kkkekies
//
LOCUS       XP_041334923             679 aa            linear   VRT 06-MAY-2021
DEFINITION  U4/U6.U5 tri-snRNP-associated protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334923
VERSION     XP_041334923.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041478989.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..679
                     /product="U4/U6.U5 tri-snRNP-associated protein 2"
                     /calculated_mol_wt=76325
     Region          220..667
                     /region_name="Peptidase_C19M"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02669"
                     /db_xref="CDD:239134"
     Site            order(343,348,627,645)
                     /site_type="active"
                     /db_xref="CDD:239134"
     CDS             1..679
                     /gene="USP39"
                     /coded_by="XM_041478989.1:20..2059"
                     /db_xref="GeneID:121359776"
ORIGIN      
        1 mcrtkpwlms srppgrqrqp gaavvaaasi pvpaagvgtg gaaplrapga aarrqgtpqr
       61 agavahchsa aaahahsnad rfapraahaq iartaamssr grrdrdprep reprgasaar
      121 assrsrrdad gerprgrrda ererarreaa ealpvdlarv krepgtgtgt gggvwggsgt
      181 aapvrvkrer epdgdsdpep epavrygrfd pedqrsrhcp yldtinksvl dfdfeklcsi
      241 slshinvyac lvcgkyfqgr glkshayihs vqlshhvfln lhtlkfyclp dnyeiidssl
      301 edityvlkpt ftaqhiahld kqaklsrayd gttylpgivg lnnikandya navlqalsnv
      361 pplrnyflee enyrhiqrpp gdimfllvqr fgelmrklwn prnfkahvsp hemlqavvlc
      421 skknfqitkq gdgveflswf lnalhaalgg tkrkkktivt dvfqgsmrif tkklphpdlp
      481 aeekaqllqn seyqermves tflyltldlp taplykdeke qliipqvplf silakfngst
      541 ekeyktyken flkrfqltrl ppylifcikr ftknnffvek nptivnfpit nvdlreylse
      601 evqathshtt ydlianivhd gkpsegsyri hvlhhgtgkw yelqdlqvtd ilpqmitlse
      661 ayiqiwkrre edetnqqga
//
LOCUS       XP_041334935             614 aa            linear   VRT 06-MAY-2021
DEFINITION  all-trans-retinol 13,14-reductase [Pyrgilauda ruficollis].
ACCESSION   XP_041334935
VERSION     XP_041334935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..614
                     /product="all-trans-retinol 13,14-reductase"
                     /calculated_mol_wt=66980
     Region          70..592
                     /region_name="COG1233"
                     /note="Phytoene dehydrogenase-related protein [Secondary
                     metabolites biosynthesis, transport and catabolism]"
                     /db_xref="CDD:440846"
     CDS             1..614
                     /gene="RETSAT"
                     /coded_by="XM_041479001.1:87..1931"
                     /db_xref="GeneID:121359782"
ORIGIN      
        1 mwlqallfla pllllllvll slvllpvsgs rnpfatdsrr ppaplvtdka vrrtvvktvf
       61 sadkvpaqld aivvgsgigg laaaallaka gwrvlvleqh gklggcchtf tekgfefdsg
      121 ihyvgemqeg slmrflvdql tdgqlewapl patydavvlg dpqgagktfh ihsgereyfq
      181 rlkeqfpgea aaidefqrlv ksagrgavll gilkmlprfl arllicsrll prlcsfsqla
      241 srslkevvdg ltpnpelrav lsyifptygv lpskasfsmh silvnhflhg awypkggage
      301 iafhtipvir raggnvfgka pvqrilldaq gracgvsvkk gqdsvdilap vvisdagifn
      361 tyerllpaea ralpeiqaql hmlapgeagf tvfvglsgsr eelgleptny fmypgndldg
      421 mmkrylassr eeaannipvl fvtspsakdp twemrhpgks tlaivtfary ewfeewkdkq
      481 vhkrgddyed lkktfvdaim qtvsklypri egrieylsgg tpltnqhyia sphgefygad
      541 hgiprlqaea iatvradtav pnlyltgqdl clggfmgalq gaiicastil krnlyadvaw
      601 lklrlqatss kkgd
//
LOCUS       XP_041334947             597 aa            linear   VRT 06-MAY-2021
DEFINITION  trans-Golgi network integral membrane protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334947
VERSION     XP_041334947.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479013.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..597
                     /product="trans-Golgi network integral membrane protein 2
                     isoform X1"
                     /calculated_mol_wt=59439
     Region          <198..>469
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <517..597
                     /region_name="KCT2"
                     /note="Keratinocyte-associated gene product; pfam17818"
                     /db_xref="CDD:407686"
     CDS             1..597
                     /gene="TGOLN2"
                     /coded_by="XM_041479013.1:17..1810"
                     /db_xref="GeneID:121359791"
ORIGIN      
        1 mgagegseal gagvgqaprs vwgrplplgs aafghrgsps glgspelpvp lgspapvacp
       61 lvprpsgvsp rlpltglpvf aaadtsqaes ggssalsgga gaagnhehts tptangneqn
      121 dkksssgdpq tgtsgtdekt adkqqdnnpt gkgtedeekk kkqsqkgtea aqddqgahgn
      181 ggsssaagqq gavsqnsnsg dtgktgssgq gntagssagq gstnsatdgq gnaksatdgq
      241 gnaksatdgq gnaksatdgq gnaksatadq gstgsstggt sstgsgtgvq gstgsgtdsq
      301 gntgtsingq sgsqnninsg qksvsqngqg gsqaggteng gskegksnnd kdsngkddnk
      361 ntngstkkdn tnqnsntqde tnqninkqns nnqdnskkeq gttqgsdgkd kntsgstnqn
      421 intqdstnqd hsntqggtsq gssdrnqagn gassqggqqt qaesqgsaad eqphgqdgaq
      481 ksqeeqspvs qpapslgvgd ssleneesav edvakaeegs dtsldlhrdk svpslprars
      541 esshffaylv stavivaaly vayhnkrkii afalegkrsk tgrrpksgdy qrldqki
//
LOCUS       XP_041334956             577 aa            linear   VRT 06-MAY-2021
DEFINITION  trans-Golgi network integral membrane protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334956
VERSION     XP_041334956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..577
                     /product="trans-Golgi network integral membrane protein 2
                     isoform X2"
                     /calculated_mol_wt=57565
     Region          <176..>449
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <497..577
                     /region_name="KCT2"
                     /note="Keratinocyte-associated gene product; pfam17818"
                     /db_xref="CDD:407686"
     CDS             1..577
                     /gene="TGOLN2"
                     /coded_by="XM_041479022.1:17..1750"
                     /db_xref="GeneID:121359791"
ORIGIN      
        1 mgagegseal gagvgqaprs vwgrplplgs aafghrgsps glgspelpvp lgspapvacp
       61 lvprpsgvsp rlpltglpvf aaadtsqaes ggssalsgga gaagnhehts tptangneqn
      121 dkksssgdpq tgtsgtdekt adkqqdnnpt gkgtedeekk kkqsqkgtea aqddqgahgn
      181 ggsssaagqq gavsqnsnsg dtgktgssgq gntagssagq gstnsatdgq gnaksatdgq
      241 gnaksatdgq gstgsstggt sstgsgtgvq gstgsgtdsq gntgtsingq sgsqnninsg
      301 qksvsqngqg gsqaggteng gskegksnnd kdsngkddnk ntngstkkdn tnqnsntqde
      361 tnqninkqns nnqdnskkeq gttqgsdgkd kntsgstnqn intqdstnqd hsntqggtsq
      421 gssdrnqagn gassqggqqt qaesqgsaad eqphgqdgaq ksqeeqspvs qpapslgvgd
      481 ssleneesav edvakaeegs dtsldlhrdk svpslprars esshffaylv stavivaaly
      541 vayhnkrkii afalegkrsk tgrrpksgdy qrldqki
//
LOCUS       XP_041334963             537 aa            linear   VRT 06-MAY-2021
DEFINITION  trans-Golgi network integral membrane protein 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041334963
VERSION     XP_041334963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479029.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="trans-Golgi network integral membrane protein 2
                     isoform X3"
                     /calculated_mol_wt=53883
     Region          <138..>409
                     /region_name="ser_rich_anae_1"
                     /note="serine-rich protein; NF033849"
                     /db_xref="CDD:468206"
     Region          <457..537
                     /region_name="KCT2"
                     /note="Keratinocyte-associated gene product; pfam17818"
                     /db_xref="CDD:407686"
     CDS             1..537
                     /gene="TGOLN2"
                     /coded_by="XM_041479029.1:66..1679"
                     /db_xref="GeneID:121359791"
ORIGIN      
        1 meapralpll plllllllgl caadtsqaes ggssalsgga gaagnhehts tptangneqn
       61 dkksssgdpq tgtsgtdekt adkqqdnnpt gkgtedeekk kkqsqkgtea aqddqgahgn
      121 ggsssaagqq gavsqnsnsg dtgktgssgq gntagssagq gstnsatdgq gnaksatdgq
      181 gnaksatdgq gnaksatdgq gnaksatadq gstgsstggt sstgsgtgvq gstgsgtdsq
      241 gntgtsingq sgsqnninsg qksvsqngqg gsqaggteng gskegksnnd kdsngkddnk
      301 ntngstkkdn tnqnsntqde tnqninkqns nnqdnskkeq gttqgsdgkd kntsgstnqn
      361 intqdstnqd hsntqggtsq gssdrnqagn gassqggqqt qaesqgsaad eqphgqdgaq
      421 ksqeeqspvs qpapslgvgd ssleneesav edvakaeegs dtsldlhrdk svpslprars
      481 esshffaylv stavivaaly vayhnkrkii afalegkrsk tgrrpksgdy qrldqki
//
LOCUS       XP_041334975             463 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 7-like 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041334975
VERSION     XP_041334975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="transcription factor 7-like 1 isoform X1"
                     /calculated_mol_wt=49240
     Region          <1..125
                     /region_name="CTNNB1_binding"
                     /note="N-terminal CTNNB1 binding; pfam08347"
                     /db_xref="CDD:462440"
     Region          220..295
                     /region_name="HMG-box_TCF7-like"
                     /note="high mobility group (HMG)-box found in the
                     transcription factor 7 (TCF-7)-like family; cd21996"
                     /db_xref="CDD:438812"
     CDS             1..463
                     /gene="TCF7L1"
                     /coded_by="XM_041479041.1:182..1573"
                     /db_xref="GeneID:121359809"
ORIGIN      
        1 mlpelgspyl angalspgga rtylqmkwpl ldvpagatlk dsrspspahl snkvpvvqha
       61 hhmhpltpli tyssepfppg sppahlspei dpntgiprpp hppelppyyp lspgavgqlp
      121 hplgwlvpqq gqpvysipag gfrhpypala mnasmsslms srfsphmvpp pahglhpsgi
      181 phptivspiv kqepsqpsss pagsskspva vkkeeekkph ikkplnafml ymkemrakvv
      241 aectlkesaa inqilgrrwh slsreeqaky yelarkerql hsqlyptwsa rdnygkkkkr
      301 kreklaqqqq qqqqqqqshd adtgslpsrs kkpcvpylpa ekpcaspass hgsmldspat
      361 psaalaspaa paathseqaq plslttkpea raqlavlask asssssssss ssslgsppsl
      421 lsrpvpfasv tptallaapp gsvpaalavl qtqplslvtk pad
//
LOCUS       XP_041334984             571 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 7-like 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041334984
VERSION     XP_041334984.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479050.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..571
                     /product="transcription factor 7-like 1 isoform X2"
                     /calculated_mol_wt=60709
     Region          8..234
                     /region_name="CTNNB1_binding"
                     /note="N-terminal CTNNB1 binding; pfam08347"
                     /db_xref="CDD:462440"
     Region          329..404
                     /region_name="HMG-box_TCF7-like"
                     /note="high mobility group (HMG)-box found in the
                     transcription factor 7 (TCF-7)-like family; cd21996"
                     /db_xref="CDD:438812"
     CDS             1..571
                     /gene="TCF7L1"
                     /coded_by="XM_041479050.1:85..1800"
                     /db_xref="GeneID:121359809"
ORIGIN      
        1 mpqleptggd dlgapdelia fqdegeeqdk gagrgsahgd ldelksslvs etenrggpga
       61 avgpgpeaer ppppresfqk prdslaevvr rqqdggffkg ppypgypflm lpelgspyla
      121 ngalspggar tylqmkwpll dvpagatlkd srspspahls nkvpvvqhah hmhpltplit
      181 yssepfppgs ppahlspeid pntgiprpph ppelppyypl spgavgqlph plgwlvpqqg
      241 qpvysipagg frhpypalam nasmsslmss rfsphmvppp ahglhpsgip hptivspivk
      301 qepsqpsssp agsskspvav kkeeekkphi kkplnafmly mkemrakvva ectlkesaai
      361 nqilgrrwhs lsreeqakyy elarkerqlh sqlyptwsar dnygkkkkrk reklaqqqqq
      421 qqqqqqshda dsslpsrskk pcvpylpaek pcaspasshg smldspatps aalaspaapa
      481 athseqaqpl slttkpeara qlavlaskas ssssssssss slgsppslls rpvpfasvtp
      541 tallaappgs vpaalavlqt qplslvtkpa d
//
LOCUS       XP_041334995             465 aa            linear   VRT 06-MAY-2021
DEFINITION  hexokinase-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041334995
VERSION     XP_041334995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="hexokinase-4"
                     /calculated_mol_wt=52302
     Region          15..458
                     /region_name="ASKHA_NBD_HK4_meta"
                     /note="nucleotide-binding domain (NBD) of type IV
                     hexokinase from metazoan hexokinase (HK) domain family;
                     cd24092"
                     /db_xref="CDD:466942"
     CDS             1..465
                     /gene="GCK"
                     /coded_by="XM_041479061.1:1..1398"
                     /db_xref="GeneID:121359823"
ORIGIN      
        1 mldhrarmes srkekveqil sefrlkeedl kkvmyrmqke mdrglkleth eeasvkmlpt
       61 yvrstpegse vgdflsldlg gtnfrvmlvk vgegeegqwk vktkhqmysi pedamtgtae
      121 mlfdyiseci sdfldkhqmk hkklplgftf sfpvrhedid kgillnwtkg fkasgaegnn
      181 vvgllrdaik rrgdfemdvv amvndtvatm iscyyedhrc evgmivgtgc nacymeemhn
      241 velvegdegr mcvntewgaf gasgeldefl leydrvvdet slnpgqqlye kiiggkymge
      301 ivrlvllklv denllfngea seklktrgtf etrfmsqies dsddrkqiyn ilsafellps
      361 rtdceivrrv cesvstraaq mcsaglagvi nrmresrsqd tlkitvgvdg svyklhpsfk
      421 dhfhatvrql tpgcditfiq seegsgrgaa lisavackma cmmgq
//
LOCUS       XP_041335010             499 aa            linear   VRT 06-MAY-2021
DEFINITION  germ cell-less protein-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335010
VERSION     XP_041335010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..499
                     /product="germ cell-less protein-like 1"
                     /calculated_mol_wt=56283
     Region          65..179
                     /region_name="BTB_POZ_GCL"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Drosophila
                     melanogaster protein germ cell-less (GCL) and similar
                     proteins; cd18305"
                     /db_xref="CDD:349614"
     Region          180..257
                     /region_name="BACK_GCL"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Drosophila melanogaster protein germ cell-less (GCL) and
                     similar proteins; cd18495"
                     /db_xref="CDD:350570"
     CDS             1..499
                     /gene="GMCL1"
                     /coded_by="XM_041479076.1:94..1593"
                     /db_xref="GeneID:121359827"
ORIGIN      
        1 mgslgsrvlr rkaglprgea aaagkggkrk rggtegtgds dsdgeaeree rllhlrgrrk
       61 klkstskyiy qtlflngens dikicalgee wnlhkiylcq sgyfssmfsg swkessmnvi
      121 eleipdqnid vealqvafgs lyrddvlinp srvvallaaa cmlqldgliq qcgetmketi
      181 taqtvcgyyn sagtygldsv kkkclewlln nlmthqsvgl fkelsinlmk qlisssnlfv
      241 lqvemdvyta lkkwmflqlv pswngsfkqv lseadawfae rrrefggdva flesaqgsaf
      301 vpvfthlrlq yiisdlasar iverdallps ewlpsvykqq wfamlraeqd ndigpqeink
      361 eelegnsmrc grklakdgdy cwrwtgfnfg ldllvtytnr yiifkrntln qpcsgsvslq
      421 prrsiafrlr lasfdcsgkv icsrttgyqi ltlekdqeqi vmnldsrllt fplyiccnfl
      481 ytspekrads eaqlehlea
//
LOCUS       XP_041335018             468 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase delta subunit 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335018
VERSION     XP_041335018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="DNA polymerase delta subunit 2"
                     /calculated_mol_wt=51176
     Region          49..175
                     /region_name="DNA_pol_D_N"
                     /note="DNA polymerase delta subunit OB-fold domain;
                     pfam18018"
                     /db_xref="CDD:436215"
     Region          195..452
                     /region_name="MPP_PolD2_C"
                     /note="PolD2 (DNA polymerase delta, subunit 2), C-terminal
                     domain; cd07387"
                     /db_xref="CDD:277333"
     Site            order(201,203,246,298..299,345,406)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277333"
     Site            order(201,203,246,298,345,406)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277333"
     Site            order(212..213,216,220,222..227,277,281,284..285,288..289,
                     448..452)
                     /site_type="other"
                     /note="PolD3 binding site [polypeptide binding]"
                     /db_xref="CDD:277333"
     CDS             1..468
                     /gene="POLD2"
                     /coded_by="XM_041479084.1:186..1592"
                     /db_xref="GeneID:121359834"
ORIGIN      
        1 mfseqaapta qgllappage pptfprvaag gysdcsqpfq lgersfcrqy ahiyavrlaa
       61 mrprlerrar grwgedialr rlselqegek ccvvgtlfkd mqlqpsilqe iseehnlvpq
      121 pplpkyiqpc dqlmledelq rikldgaidv qrlvtgtiva vygceqddgr flvedhcfad
      181 lppalpwsgp ssdrfvllas glglgsvsge allstqllvd vvtgqlgaeg eqscaahitr
      241 vilagnllsq ntqsrdtink akyltkktqa asveavkmld eillqlctsv pvdvmpgefd
      301 ptnytlpqqp lhrcmlplas ayatlrlvtn pyqasldgvr flgtsgqnis difkyssmdd
      361 yleilewtll aghisptapd tlgcypfyks dpfiltecph vyfcgnaprf qskllqgkeg
      421 qrvlllavpd fsatqtaclv nlrdlscqpi tfssfgadse dgdmevgh
//
LOCUS       XP_041335027             468 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase delta subunit 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335027
VERSION     XP_041335027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="DNA polymerase delta subunit 2"
                     /calculated_mol_wt=51176
     Region          49..175
                     /region_name="DNA_pol_D_N"
                     /note="DNA polymerase delta subunit OB-fold domain;
                     pfam18018"
                     /db_xref="CDD:436215"
     Region          195..452
                     /region_name="MPP_PolD2_C"
                     /note="PolD2 (DNA polymerase delta, subunit 2), C-terminal
                     domain; cd07387"
                     /db_xref="CDD:277333"
     Site            order(201,203,246,298..299,345,406)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277333"
     Site            order(201,203,246,298,345,406)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277333"
     Site            order(212..213,216,220,222..227,277,281,284..285,288..289,
                     448..452)
                     /site_type="other"
                     /note="PolD3 binding site [polypeptide binding]"
                     /db_xref="CDD:277333"
     CDS             1..468
                     /gene="POLD2"
                     /coded_by="XM_041479093.1:156..1562"
                     /db_xref="GeneID:121359834"
ORIGIN      
        1 mfseqaapta qgllappage pptfprvaag gysdcsqpfq lgersfcrqy ahiyavrlaa
       61 mrprlerrar grwgedialr rlselqegek ccvvgtlfkd mqlqpsilqe iseehnlvpq
      121 pplpkyiqpc dqlmledelq rikldgaidv qrlvtgtiva vygceqddgr flvedhcfad
      181 lppalpwsgp ssdrfvllas glglgsvsge allstqllvd vvtgqlgaeg eqscaahitr
      241 vilagnllsq ntqsrdtink akyltkktqa asveavkmld eillqlctsv pvdvmpgefd
      301 ptnytlpqqp lhrcmlplas ayatlrlvtn pyqasldgvr flgtsgqnis difkyssmdd
      361 yleilewtll aghisptapd tlgcypfyks dpfiltecph vyfcgnaprf qskllqgkeg
      421 qrvlllavpd fsatqtaclv nlrdlscqpi tfssfgadse dgdmevgh
//
LOCUS       XP_041335037             468 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase delta subunit 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335037
VERSION     XP_041335037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="DNA polymerase delta subunit 2"
                     /calculated_mol_wt=51176
     Region          49..175
                     /region_name="DNA_pol_D_N"
                     /note="DNA polymerase delta subunit OB-fold domain;
                     pfam18018"
                     /db_xref="CDD:436215"
     Region          195..452
                     /region_name="MPP_PolD2_C"
                     /note="PolD2 (DNA polymerase delta, subunit 2), C-terminal
                     domain; cd07387"
                     /db_xref="CDD:277333"
     Site            order(201,203,246,298..299,345,406)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277333"
     Site            order(201,203,246,298,345,406)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277333"
     Site            order(212..213,216,220,222..227,277,281,284..285,288..289,
                     448..452)
                     /site_type="other"
                     /note="PolD3 binding site [polypeptide binding]"
                     /db_xref="CDD:277333"
     CDS             1..468
                     /gene="POLD2"
                     /coded_by="XM_041479103.1:51..1457"
                     /db_xref="GeneID:121359834"
ORIGIN      
        1 mfseqaapta qgllappage pptfprvaag gysdcsqpfq lgersfcrqy ahiyavrlaa
       61 mrprlerrar grwgedialr rlselqegek ccvvgtlfkd mqlqpsilqe iseehnlvpq
      121 pplpkyiqpc dqlmledelq rikldgaidv qrlvtgtiva vygceqddgr flvedhcfad
      181 lppalpwsgp ssdrfvllas glglgsvsge allstqllvd vvtgqlgaeg eqscaahitr
      241 vilagnllsq ntqsrdtink akyltkktqa asveavkmld eillqlctsv pvdvmpgefd
      301 ptnytlpqqp lhrcmlplas ayatlrlvtn pyqasldgvr flgtsgqnis difkyssmdd
      361 yleilewtll aghisptapd tlgcypfyks dpfiltecph vyfcgnaprf qskllqgkeg
      421 qrvlllavpd fsatqtaclv nlrdlscqpi tfssfgadse dgdmevgh
//
LOCUS       XP_041335048             385 aa            linear   VRT 06-MAY-2021
DEFINITION  smad nuclear-interacting protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041335048
VERSION     XP_041335048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..385
                     /product="smad nuclear-interacting protein 1-like"
                     /calculated_mol_wt=44113
     Region          11..>185
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          212..351
                     /region_name="FHA"
                     /note="forkhead associated (FHA) domain superfamily;
                     cl00062"
                     /db_xref="CDD:469597"
     Site            order(272..273,288..289,291,314..315)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:438714"
     CDS             1..385
                     /gene="LOC121359848"
                     /coded_by="XM_041479114.1:2903..4060"
                     /db_xref="GeneID:121359848"
ORIGIN      
        1 mlsegfcvcr ssadtgsgag rergraegsg wprrrgragh rgssghrsra ghrdssghrs
       61 rdghrsrdgh rsrsrhrspg rkspghrspg hspqrsagrv kqerddrcgs gneerqpseq
      121 ehrrdrsgdr arsrdqnrhk dhsdrkkkrs dspgarchqr dtrnlreqqa erelynerrr
      181 qhrqgtegsg qnaepwqses kpklkpdank kpsfepsgal ledtntvggv lvryseppea
      241 riprtrwrly pfkkdellpv lhihrqsayl lgrhrriadi piahpscsqq havlqyrlvq
      301 rqlrpyimdl gsgngtflnn qrvqpqryye lrekdvlrfg fssreyvllh essdkseana
      361 kdedegeeee eegigegqrr etpcn
//
LOCUS       XP_041335059             381 aa            linear   VRT 06-MAY-2021
DEFINITION  ELMO domain-containing protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335059
VERSION     XP_041335059.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479125.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="ELMO domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=41725
     Region          139..321
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..381
                     /gene="ELMOD3"
                     /coded_by="XM_041479125.1:439..1584"
                     /db_xref="GeneID:121359858"
ORIGIN      
        1 msgaggsers eqrperpeqr qrvvppipal gqggvlqelm lgvgqppdpg iseeqrqare
       61 ewealeeiqs glggssgaap ppisfsealq hfqsaelsss rgkvrapgrr gilaallrcl
      121 cgpprlrpql rgeqelalam aqcalddser vhmrilqtiy rqltrsrlgc prygahweel
      181 gfqapsgtpc apdpaplasl ghvpapqcps wtpklipgad pgtdlrgtgm lglmqilffv
      241 ldsrtlplar eifqlsqhet qnfpfcimsv nitriviqal qeerlsrecn rrqqvigvln
      301 dlyaaaflrl srlweqqhgt vanaafflke lelstkkkpr qllksleayl srslqppspp
      361 sssqiqftsi cdpgvelegd s
//
LOCUS       XP_041335065             372 aa            linear   VRT 06-MAY-2021
DEFINITION  ELMO domain-containing protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335065
VERSION     XP_041335065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="ELMO domain-containing protein 3 isoform X2"
                     /calculated_mol_wt=40943
     Region          139..312
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..372
                     /gene="ELMOD3"
                     /coded_by="XM_041479131.1:439..1557"
                     /db_xref="GeneID:121359858"
ORIGIN      
        1 msgaggsers eqrperpeqr qrvvppipal gqggvlqelm lgvgqppdpg iseeqrqare
       61 ewealeeiqs glggssgaap ppisfsealq hfqsaelsss rgkvrapgrr gilaallrcl
      121 cgpprlrpql rgeqelalam aqcalddser vhmrilqtiy rqltrsrlgc prygahweel
      181 gfqdpaplas lghvpapqcp swtpklipga dpgtdlrgtg mlglmqilff vldsrtlpla
      241 reifqlsqhe tqnfpfcims vnitriviqa lqeerlsrec nrrqqvigvl ndlyaaaflr
      301 lsrlweqqhg tvanaafflk elelstkkkp rqllksleay lsrslqppsp psssqiqfts
      361 icdpgveleg ds
//
LOCUS       XP_041335071             347 aa            linear   VRT 06-MAY-2021
DEFINITION  ELMO domain-containing protein 3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335071
VERSION     XP_041335071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="ELMO domain-containing protein 3 isoform X3"
                     /calculated_mol_wt=38368
     Region          139..287
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..347
                     /gene="ELMOD3"
                     /coded_by="XM_041479137.1:436..1479"
                     /db_xref="GeneID:121359858"
ORIGIN      
        1 msgaggsers eqrperpeqr qrvvppipal gqggvlqelm lgvgqppdpg iseeqrqare
       61 ewealeeiqs glggssgaap ppisfsealq hfqsaelsss rgkvrapgrr gilaallrcl
      121 cgpprlrpql rgeqelalam aqcalddser vhmrilqtiy rqltrsrlgc prygahweel
      181 gfqgadpgtd lrgtgmlglm qilffvldsr tlplareifq lsqhetqnfp fcimsvnitr
      241 iviqalqeer lsrecnrrqq vigvlndlya aaflrlsrlw eqqhgtvana afflkelels
      301 tkkkprqllk sleaylsrsl qppsppsssq iqftsicdpg velegds
//
LOCUS       XP_041335079             328 aa            linear   VRT 06-MAY-2021
DEFINITION  ELMO domain-containing protein 3 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335079
VERSION     XP_041335079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479145.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="ELMO domain-containing protein 3 isoform X4"
                     /calculated_mol_wt=35452
     Region          139..>286
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..328
                     /gene="ELMOD3"
                     /coded_by="XM_041479145.1:443..1429"
                     /db_xref="GeneID:121359858"
ORIGIN      
        1 msgaggsers eqrperpeqr qrvvppipal gqggvlqelm lgvgqppdpg iseeqrqare
       61 ewealeeiqs glggssgaap ppisfsealq hfqsaelsss rgkvrapgrr gilaallrcl
      121 cgpprlrpql rgeqelalam aqcalddser vhmrilqtiy rqltrsrlgc prygahweel
      181 gfqapsgtpc apdpaplasl ghvpapqcps wtpklipgad pgtdlrgtgm lglmqilffv
      241 ldsrtlplar eifqlsqhet qnfpfcimsv nitriviqal qeerlsragi ihqkeaeaaa
      301 eipgslpepq psaslpslll pdpihqhl
//
LOCUS       XP_041335087             306 aa            linear   VRT 06-MAY-2021
DEFINITION  ELMO domain-containing protein 3 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335087
VERSION     XP_041335087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="ELMO domain-containing protein 3 isoform X5"
                     /calculated_mol_wt=33525
     Region          <142..246
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     CDS             1..306
                     /gene="ELMOD3"
                     /coded_by="XM_041479153.1:439..1359"
                     /db_xref="GeneID:121359858"
ORIGIN      
        1 msgaggsers eqrperpeqr qrvvppipal gqggvlqelm lgvgqppdpg iseeqrqare
       61 ewealeeiqs glggssgaap ppisfsealq hfqsaelsss rgkvrapgrr gilaallrcl
      121 cgpprlrpql rgeqelalam aqcadpgtdl rgtgmlglmq ilffvldsrt lplareifql
      181 sqhetqnfpf cimsvnitri viqalqeerl srecnrrqqv igvlndlyaa aflrlsrlwe
      241 qqhgtvanaa fflkelelst kkkprqllks leaylsrslq ppsppsssqi qftsicdpgv
      301 elegds
//
LOCUS       XP_041335102             334 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator protein Pur-beta [Pyrgilauda ruficollis].
ACCESSION   XP_041335102
VERSION     XP_041335102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="transcriptional activator protein Pur-beta"
                     /calculated_mol_wt=34818
     Region          44..295
                     /region_name="PurA"
                     /note="PurA ssDNA and RNA-binding protein; pfam04845"
                     /db_xref="CDD:282672"
     CDS             1..334
                     /gene="PURB"
                     /coded_by="XM_041479168.1:17..1021"
                     /db_xref="GeneID:121359889"
ORIGIN      
        1 madgdsgser gggggfgtar ggaggagpaa gpggggaagp eqetqelask rldiqnkrfy
       61 ldvkqnakgr flkiaevgag gsksrltlsm avaaefrdyl gdfiehyaql gpsspeqlaq
      121 aagppgedga gprralksef lvrenrkyyl dlkenqrgrf lrirqtvnrg pggpggfagg
      181 ppglqsgqti alpaqglief rdalaklidd yggeedelgg pggggpgggg lygelpegts
      241 itvdskrfff dvgcnkygvf lrvsevkpsy rnaitvpyka wakfggafcr yaeemrdiqe
      301 rqrdklydrr agppgpgsgs gagddsdgdd vddd
//
LOCUS       XP_041335116             315 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335116
VERSION     XP_041335116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="annexin A4 isoform X1"
                     /calculated_mol_wt=35212
     Region          14..79
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          86..151
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          169..235
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          245..310
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..315
                     /gene="ANXA4"
                     /coded_by="XM_041479182.1:180..1127"
                     /db_xref="GeneID:121359894"
ORIGIN      
        1 matikgvsaf saeqeaqalr kamkglgtde daiietltkl nisqrqqvli tykstigrdl
       61 iddlkselsg nferviiglm tpttmydvhe lrralkgagt degclieila srtnaeirhi
      121 nenyklqygs tleddivsdt sskfrrvlvs latgnrdegt fvdealaqqd aqalyeagek
      181 kwgtdevefl silctrnrch llrvfdvyrv iankditdsi ksemsgdled allavvkcmr
      241 nkpayfaerl yksmkglgtd dstlirvmvs raeidmlyir reflamygks lhsfikgdcs
      301 gdyrkvllrl cgged
//
LOCUS       XP_041335127             315 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335127
VERSION     XP_041335127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="annexin A4 isoform X1"
                     /calculated_mol_wt=35212
     Region          14..79
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          86..151
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          169..235
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          245..310
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..315
                     /gene="ANXA4"
                     /coded_by="XM_041479193.1:401..1348"
                     /db_xref="GeneID:121359894"
ORIGIN      
        1 matikgvsaf saeqeaqalr kamkglgtde daiietltkl nisqrqqvli tykstigrdl
       61 iddlkselsg nferviiglm tpttmydvhe lrralkgagt degclieila srtnaeirhi
      121 nenyklqygs tleddivsdt sskfrrvlvs latgnrdegt fvdealaqqd aqalyeagek
      181 kwgtdevefl silctrnrch llrvfdvyrv iankditdsi ksemsgdled allavvkcmr
      241 nkpayfaerl yksmkglgtd dstlirvmvs raeidmlyir reflamygks lhsfikgdcs
      301 gdyrkvllrl cgged
//
LOCUS       XP_041335138             254 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335138
VERSION     XP_041335138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479204.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="annexin A4 isoform X2"
                     /calculated_mol_wt=26171
     CDS             1..254
                     /gene="ANXA4"
                     /coded_by="XM_041479204.1:1..765"
                     /db_xref="GeneID:121359894"
ORIGIN      
        1 mrpagpacaa ppghgggrlp agpgariaaw rrhrrppsps gtgtdpaaaa prrphptrkw
       61 avtgspgcrr ehrprasasc rarprrpglc rpvplrsvpg crapecpvpq pperppphsa
      121 egggagarrd ggaargtlga vvpcgrrtgy svavgttspg mprgpgrqga lcrrgregav
      181 aerpgrgrps drpgpeaapg tadgarglcv llaardecrn pvreeprptf glcmvtgfnl
      241 hetclavlwg svmn
//
LOCUS       XP_041335154             292 aa            linear   VRT 06-MAY-2021
DEFINITION  fumarylacetoacetate hydrolase domain-containing protein 2-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335154
VERSION     XP_041335154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..292
                     /product="fumarylacetoacetate hydrolase domain-containing
                     protein 2-like"
                     /calculated_mol_wt=31886
     Region          78..292
                     /region_name="YcgM"
                     /note="2-keto-4-pentenoate
                     hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
                     (catechol pathway) [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG0179"
                     /db_xref="CDD:439949"
     CDS             1..292
                     /gene="LOC121359895"
                     /coded_by="XM_041479220.1:44..922"
                     /db_xref="GeneID:121359895"
ORIGIN      
        1 mrgalrlvrf rgaagggprl gleeapggdl vdlsaaepel prsmreflei gprglelaqr
       61 alqsgqhrvp rgaarllapl gdpqkvicvg lnyhdhcqeq aakvpkepli fskfpsaiag
      121 pfddivhpqd tseldwevel aavigkrgrh iqeaealehv lgytvandvs ardwqmrrng
      181 rqwllgktfd tfcplgpaiv treavpdvhk lwircsvngq lmqdsntqhl ifgvpalvaw
      241 vsrfvtlvpg dilltgtpag vgvfrkppvf lkrgdevqce ieelgticnr vv
//
LOCUS       XP_041335164             292 aa            linear   VRT 06-MAY-2021
DEFINITION  fumarylacetoacetate hydrolase domain-containing protein 2-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335164
VERSION     XP_041335164.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479230.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..292
                     /product="fumarylacetoacetate hydrolase domain-containing
                     protein 2-like"
                     /calculated_mol_wt=31886
     Region          78..292
                     /region_name="YcgM"
                     /note="2-keto-4-pentenoate
                     hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
                     (catechol pathway) [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG0179"
                     /db_xref="CDD:439949"
     CDS             1..292
                     /gene="LOC121359895"
                     /coded_by="XM_041479230.1:44..922"
                     /db_xref="GeneID:121359895"
ORIGIN      
        1 mrgalrlvrf rgaagggprl gleeapggdl vdlsaaepel prsmreflei gprglelaqr
       61 alqsgqhrvp rgaarllapl gdpqkvicvg lnyhdhcqeq aakvpkepli fskfpsaiag
      121 pfddivhpqd tseldwevel aavigkrgrh iqeaealehv lgytvandvs ardwqmrrng
      181 rqwllgktfd tfcplgpaiv treavpdvhk lwircsvngq lmqdsntqhl ifgvpalvaw
      241 vsrfvtlvpg dilltgtpag vgvfrkppvf lkrgdevqce ieelgticnr vv
//
LOCUS       XP_041335178             256 aa            linear   VRT 06-MAY-2021
DEFINITION  calsenilin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335178
VERSION     XP_041335178.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479244.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="calsenilin-like isoform X1"
                     /calculated_mol_wt=27946
     Region          <125..241
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..256
                     /gene="LOC121359902"
                     /coded_by="XM_041479244.1:101..871"
                     /db_xref="GeneID:121359902"
ORIGIN      
        1 mgiqgmelca vavlillfia vlkqfgilep isaedsgdad velpsarhhp egleqllart
       61 kftkpelqsl yrgfksecps glvdeetftl iysrffprgg esgvpeapge ggdtgeagsh
      121 ravpadassy ahflfdafda drngalcfqd favglsvllr gteqqklrwt fdlydvnkdg
      181 cvskedmlqi mkaiyammgr ctepapgasa paqhvelffq kmdrngdgvv tfeeflatcq
      241 edkdimssmq ifhsvl
//
LOCUS       XP_041335188             230 aa            linear   VRT 06-MAY-2021
DEFINITION  calsenilin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335188
VERSION     XP_041335188.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479254.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..230
                     /product="calsenilin-like isoform X2"
                     /calculated_mol_wt=25572
     Region          80..215
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..230
                     /gene="LOC121359902"
                     /coded_by="XM_041479254.1:101..793"
                     /db_xref="GeneID:121359902"
ORIGIN      
        1 mgiqgmelca vavlillfia vlkqfgilep isaedsgdad velpsarhhp egleqllart
       61 kftkpelqsl yrgfksecps glvdeetftl iysrffprgd assyahflfd afdadrngal
      121 cfqdfavgls vllrgteqqk lrwtfdlydv nkdgcvsked mlqimkaiya mmgrctepap
      181 gasapaqhve lffqkmdrng dgvvtfeefl atcqedkdim ssmqifhsvl
//
LOCUS       XP_041335202             198 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptobrevin homolog YKT6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335202
VERSION     XP_041335202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479268.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="synaptobrevin homolog YKT6 isoform X1"
                     /calculated_mol_wt=22319
     Region          3..198
                     /region_name="SNC1"
                     /note="Synaptobrevin/VAMP-like protein [Intracellular
                     trafficking and secretion]; COG5143"
                     /db_xref="CDD:227472"
     CDS             1..198
                     /gene="YKT6"
                     /coded_by="XM_041479268.1:153..749"
                     /db_xref="GeneID:121359907"
ORIGIN      
        1 mrlyslsvly kgdpkvhllk aaydvstfsf fqrasvqefm tftsqliver salgsrasvk
       61 eqeylchvyv rsdglagvvi adneypqrvc ftlldkvlde fsrqvsrmdw psgspatisy
      121 saldgylsky qnprdadpmt rvqaeldetk iilhntmesl lergeklddl vsksevlgaq
      181 skafyktark qnscceim
//
LOCUS       XP_041335212             198 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptobrevin homolog YKT6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335212
VERSION     XP_041335212.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479278.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="synaptobrevin homolog YKT6 isoform X1"
                     /calculated_mol_wt=22319
     Region          3..198
                     /region_name="SNC1"
                     /note="Synaptobrevin/VAMP-like protein [Intracellular
                     trafficking and secretion]; COG5143"
                     /db_xref="CDD:227472"
     CDS             1..198
                     /gene="YKT6"
                     /coded_by="XM_041479278.1:86..682"
                     /db_xref="GeneID:121359907"
ORIGIN      
        1 mrlyslsvly kgdpkvhllk aaydvstfsf fqrasvqefm tftsqliver salgsrasvk
       61 eqeylchvyv rsdglagvvi adneypqrvc ftlldkvlde fsrqvsrmdw psgspatisy
      121 saldgylsky qnprdadpmt rvqaeldetk iilhntmesl lergeklddl vsksevlgaq
      181 skafyktark qnscceim
//
LOCUS       XP_041335220             198 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptobrevin homolog YKT6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335220
VERSION     XP_041335220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="synaptobrevin homolog YKT6 isoform X1"
                     /calculated_mol_wt=22319
     Region          3..198
                     /region_name="SNC1"
                     /note="Synaptobrevin/VAMP-like protein [Intracellular
                     trafficking and secretion]; COG5143"
                     /db_xref="CDD:227472"
     CDS             1..198
                     /gene="YKT6"
                     /coded_by="XM_041479286.1:55..651"
                     /db_xref="GeneID:121359907"
ORIGIN      
        1 mrlyslsvly kgdpkvhllk aaydvstfsf fqrasvqefm tftsqliver salgsrasvk
       61 eqeylchvyv rsdglagvvi adneypqrvc ftlldkvlde fsrqvsrmdw psgspatisy
      121 saldgylsky qnprdadpmt rvqaeldetk iilhntmesl lergeklddl vsksevlgaq
      181 skafyktark qnscceim
//
LOCUS       XP_041335228             189 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptobrevin homolog YKT6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335228
VERSION     XP_041335228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..189
                     /product="synaptobrevin homolog YKT6 isoform X2"
                     /calculated_mol_wt=20979
     Region          25..189
                     /region_name="SNC1"
                     /note="Synaptobrevin/VAMP-like protein [Intracellular
                     trafficking and secretion]; COG5143"
                     /db_xref="CDD:227472"
     Region          127..186
                     /region_name="R-SNARE_YKT6"
                     /note="SNARE motif of YKT6; cd15867"
                     /db_xref="CDD:277220"
     Site            order(129..131,133..134,136..141,143..145,147,150..151,
                     153..155,157..162,164..169,171..176,178..183,185..186)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277220"
     Site            154
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277220"
     CDS             1..189
                     /gene="YKT6"
                     /coded_by="XM_041479294.1:26..595"
                     /db_xref="GeneID:121359907"
ORIGIN      
        1 miskldkpgs gmfskldkpg sgmlssvqef mtftsqlive rsalgsrasv keqeylchvy
       61 vrsdglagvv iadneypqrv cftlldkvld efsrqvsrmd wpsgspatis ysaldgylsk
      121 yqnprdadpm trvqaeldet kiilhntmes llergekldd lvsksevlga qskafyktar
      181 kqnscceim
//
LOCUS       XP_041335242             190 aa            linear   VRT 06-MAY-2021
DEFINITION  histone H2A.V [Pyrgilauda ruficollis].
ACCESSION   XP_041335242
VERSION     XP_041335242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479308.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="histone H2A.V"
                     /calculated_mol_wt=19692
     Region          55..183
                     /region_name="PLN00154"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:177756"
     CDS             1..190
                     /gene="LOC121359924"
                     /coded_by="XM_041479308.1:16..588"
                     /db_xref="GeneID:121359924"
ORIGIN      
        1 mdgkrsgspi ghcgmfklvw eaviggdaar paaparaghc laapeagrar rwlwgsdggs
       61 gtmaggkagk dsgkakakav srsqraglqf pvgrihrhlk trttshgrvg ataavysaai
      121 leyltaevle lagnaskdlk vkritprhlq lairgdeeld slikatiagg gviphihksl
      181 igkkgqqkta
//
LOCUS       XP_041335255             163 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121359930 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335255
VERSION     XP_041335255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479321.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..163
                     /product="uncharacterized protein LOC121359930 isoform X1"
                     /calculated_mol_wt=17241
     Region          86..161
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     CDS             1..163
                     /gene="LOC121359930"
                     /coded_by="XM_041479321.1:491..982"
                     /db_xref="GeneID:121359930"
ORIGIN      
        1 maasflllll lllgaaqata pppcqgdpss wcwdtatatr cgweqqcqhl rdslalgnva
       61 dgdnvadgdn vadtadgdsv aqhrvikcrl ctkvlkriqk lagdnpdesa vaaalqkgcr
      121 klgralgkec qklvknyqeq iteglqngdt prdmcsamgi cqs
//
LOCUS       XP_041335264             162 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121359930 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335264
VERSION     XP_041335264.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479330.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="uncharacterized protein LOC121359930 isoform X2"
                     /calculated_mol_wt=17170
     Region          85..160
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     CDS             1..162
                     /gene="LOC121359930"
                     /coded_by="XM_041479330.1:491..979"
                     /db_xref="GeneID:121359930"
ORIGIN      
        1 maasflllll lllgaqatap ppcqgdpssw cwdtatatrc gweqqcqhlr dslalgnvad
       61 gdnvadgdnv adtadgdsva qhrvikcrlc tkvlkriqkl agdnpdesav aaalqkgcrk
      121 lgralgkecq klvknyqeqi teglqngdtp rdmcsamgic qs
//
LOCUS       XP_041335278             158 aa            linear   VRT 06-MAY-2021
DEFINITION  max dimerization protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335278
VERSION     XP_041335278.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479344.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..158
                     /product="max dimerization protein 1"
                     /calculated_mol_wt=17497
     Region          1..73
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(2..3,5,10,30..31)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(8..9,12..13,15..16,20,31..32,35..36,39,41..42,
                     45..46)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..158
                     /gene="MXD1"
                     /coded_by="XM_041479344.1:556..1032"
                     /db_xref="GeneID:121359939"
ORIGIN      
        1 meknrraqlr lclerlkglv plgaaagrht tlslltrarl hiqkledqer ralhqieqlq
       61 reqrhlqrql eklgmervri dsigsslsse rsdsdqeemd vdvestddlp aeldwssssp
      121 sdsdergslq slgsdegyss sggararlpg srklpagi
//
LOCUS       XP_041335291             156 aa            linear   VRT 06-MAY-2021
DEFINITION  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335291
VERSION     XP_041335291.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479357.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="U4/U6.U5 small nuclear ribonucleoprotein 27 kDa
                     protein isoform X1"
                     /calculated_mol_wt=18709
     Region          109..155
                     /region_name="SNRNP27"
                     /note="U4/U6.U5 small nuclear ribonucleoproteins;
                     pfam08648"
                     /db_xref="CDD:462548"
     CDS             1..156
                     /gene="SNRNP27"
                     /coded_by="XM_041479357.1:141..611"
                     /db_xref="GeneID:121359947"
ORIGIN      
        1 mgrsrsrspp rrerrrsrst srdrdrrrre rsrsrdrdrr rsrsrsphrr rssrsprrhr
       61 sssssparpk errdeekkel kdpkkerqit eedlqgktee eiemmkmmgf asfdttkgkk
      121 vdgaanayai nvsqkrkyrq ymnrkggfnr pldfia
//
LOCUS       XP_041335302             156 aa            linear   VRT 06-MAY-2021
DEFINITION  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335302
VERSION     XP_041335302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479368.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="U4/U6.U5 small nuclear ribonucleoprotein 27 kDa
                     protein isoform X1"
                     /calculated_mol_wt=18709
     Region          109..155
                     /region_name="SNRNP27"
                     /note="U4/U6.U5 small nuclear ribonucleoproteins;
                     pfam08648"
                     /db_xref="CDD:462548"
     CDS             1..156
                     /gene="SNRNP27"
                     /coded_by="XM_041479368.1:541..1011"
                     /db_xref="GeneID:121359947"
ORIGIN      
        1 mgrsrsrspp rrerrrsrst srdrdrrrre rsrsrdrdrr rsrsrsphrr rssrsprrhr
       61 sssssparpk errdeekkel kdpkkerqit eedlqgktee eiemmkmmgf asfdttkgkk
      121 vdgaanayai nvsqkrkyrq ymnrkggfnr pldfia
//
LOCUS       XP_041335316             155 aa            linear   VRT 06-MAY-2021
DEFINITION  U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335316
VERSION     XP_041335316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="U4/U6.U5 small nuclear ribonucleoprotein 27 kDa
                     protein isoform X2"
                     /calculated_mol_wt=18622
     Region          108..154
                     /region_name="SNRNP27"
                     /note="U4/U6.U5 small nuclear ribonucleoproteins;
                     pfam08648"
                     /db_xref="CDD:462548"
     CDS             1..155
                     /gene="SNRNP27"
                     /coded_by="XM_041479382.1:138..605"
                     /db_xref="GeneID:121359947"
ORIGIN      
        1 mgrsrsrspp rrerrrsrst srdrdrrrre rsrsrdrdrr rsrsrsphrr rsrsprrhrs
       61 ssssparpke rrdeekkelk dpkkerqite edlqgkteee iemmkmmgfa sfdttkgkkv
      121 dgaanayain vsqkrkyrqy mnrkggfnrp ldfia
//
LOCUS       XP_041335327             126 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase subunit 5B, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335327
VERSION     XP_041335327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..126
                     /product="cytochrome c oxidase subunit 5B, mitochondrial"
                     /calculated_mol_wt=13864
     Region          29..125
                     /region_name="Cyt_c_Oxidase_Vb"
                     /note="Cytochrome c oxidase subunit Vb. Cytochrome c
                     oxidase (CcO), the terminal oxidase in the respiratory
                     chains of eukaryotes and most bacteria, is a multi-chain
                     transmembrane protein located in the inner membrane of
                     mitochondria and the cell membrane of...; cd00924"
                     /db_xref="CDD:238464"
     Site            order(29,32..35,37,40,42,45,59..60,122)
                     /site_type="other"
                     /note="Subunit Vb/III interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            29
                     /site_type="other"
                     /note="Subunit Vb/Va (of dimer complex) interface
                     [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            29
                     /site_type="other"
                     /note="Subunit Vb/VIa interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            order(40,42)
                     /site_type="other"
                     /note="Subunit Vb/VIIa interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            order(61,64,75,79..80,84..87,89,95..96,99,101,117)
                     /site_type="other"
                     /note="Subunit Vb/I interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            order(88,90,110,113)
                     /site_type="other"
                     /note="Zinc binding site [ion binding]"
                     /db_xref="CDD:238464"
     Site            95
                     /site_type="other"
                     /note="Subunit Vb/VIa (of dimer complex) interface
                     [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            103
                     /site_type="other"
                     /note="Subunit Vb/IV interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     Site            109..110
                     /site_type="other"
                     /note="Subunit Vb/Va interface [polypeptide binding]"
                     /db_xref="CDD:238464"
     CDS             1..126
                     /gene="LOC121359961"
                     /coded_by="XM_041479393.1:67..447"
                     /db_xref="GeneID:121359961"
ORIGIN      
        1 masrllrvsa alrllpaasa rapparhlsv pgnlasdeeq atglerkvme amnkgldpys
       61 mfrpkryagt redpnlvpsv sskrivgcvc eednsyvvwf wlhkgeaqrc pscgahykli
      121 phelph
//
LOCUS       XP_041335339             106 aa            linear   VRT 06-MAY-2021
DEFINITION  vesicle-associated membrane protein 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041335339
VERSION     XP_041335339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479405.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..106
                     /product="vesicle-associated membrane protein 8"
                     /calculated_mol_wt=11401
     Region          16..80
                     /region_name="R-SNARE_VAMP8"
                     /note="SNARE motif of VAMP8; cd15868"
                     /db_xref="CDD:277221"
     Site            order(17..19,21..22,24..29,31..33,35,38..39,41..43,45..50,
                     52..57,59..64,66..71,73..75)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277221"
     Site            42
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277221"
     CDS             1..106
                     /gene="VAMP8"
                     /coded_by="XM_041479405.1:49..369"
                     /db_xref="GeneID:121359971"
ORIGIN      
        1 magvpggspa leggagrvra lqqevqgvtt imsqnveril argenleqlh sksqdleats
       61 ehfrttsqkm arrywwknvk llvilglvgv ivliliilla tgtipt
//
LOCUS       XP_041335352             128 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: synaptobrevin-like protein 5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335352
VERSION     XP_041335352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479418.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..128
                     /product="LOW QUALITY PROTEIN: synaptobrevin-like protein
                     5"
                     /calculated_mol_wt=13718
     Region          2..>49
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(25,32,35)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            28
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..128
                     /gene="LOC121359980"
                     /coded_by="XM_041479418.1:540..926"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121359980"
ORIGIN      
        1 maglarcqre aeevaelmrq nvakalereg hleqlqsraq arrqaseaft rttravtrrq
       61 rrghrrwqlv alglgllllf ilglalalal ahsspgtvts tvptpxggte hppstagspr
      121 gqrdhgdk
//
LOCUS       XP_041335361             495 aa            linear   VRT 06-MAY-2021
DEFINITION  set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335361
VERSION     XP_041335361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479427.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="set1/Ash2 histone methyltransferase complex
                     subunit ASH2 isoform X1"
                     /calculated_mol_wt=55522
     Region          259..450
                     /region_name="SPRY_Ash2"
                     /note="SPRY domain in Ash2; cd12872"
                     /db_xref="CDD:293932"
     CDS             1..495
                     /gene="ASH2L"
                     /coded_by="XM_041479427.1:32..1519"
                     /db_xref="GeneID:121359987"
ORIGIN      
        1 mtnysfhcnv chhsgntyfl rkqanlkemc lsalanltwq srtqdehpkt mfskdkdiip
       61 fidkywecmt trqrpgkmtw pnnivktmck erdvflvkeh pdpgskdpee dypkfglldq
      121 dlanigpayd nqkqnnavst sgslnggasl gggmaaggsg kgrgakrkqq dggttgtakk
      181 trsdplfaaq rlpphgyple hpfnkdgyry ilaepdphap dpekleldcw agkpipgdly
      241 raclyervll alhdrapqlk isddrltvvg ekgysmvras hgvrkgawyf eismdemppd
      301 taarlgwsqp lgnlqaplgy dkfsyswrsk kgtkfhqsig khyssgygqg dvlgfyinlp
      361 edtetakslp dtykdkalik fksylyfeek dfvdkaeksl kqapgsqiif fkngvsqgva
      421 fkdifegvyf paislykgct vsinfgpyfk ypprdityhp msdmgwgavv ehtladvlyh
      481 vetevdgrrs ppwep
//
LOCUS       XP_041335370             489 aa            linear   VRT 06-MAY-2021
DEFINITION  set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335370
VERSION     XP_041335370.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479436.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="set1/Ash2 histone methyltransferase complex
                     subunit ASH2 isoform X2"
                     /calculated_mol_wt=55080
     Region          253..444
                     /region_name="SPRY_Ash2"
                     /note="SPRY domain in Ash2; cd12872"
                     /db_xref="CDD:293932"
     CDS             1..489
                     /gene="ASH2L"
                     /coded_by="XM_041479436.1:32..1501"
                     /db_xref="GeneID:121359987"
ORIGIN      
        1 mtnysfhcnv chhsgntyfl rkqanlkemc lsalanltwq srtqdehpkt mfskdkdiip
       61 fidkywecmt trqrpgkmtw pnnivktmck erdvflvkeh pdpgskdpee dypkfglldq
      121 dlanigpayd nqkqnnavst sgslnggmaa ggsgkgrgak rkqqdggttg takktrsdpl
      181 faaqrlpphg yplehpfnkd gyryilaepd phapdpekle ldcwagkpip gdlyraclye
      241 rvllalhdra pqlkisddrl tvvgekgysm vrashgvrkg awyfeismde mppdtaarlg
      301 wsqplgnlqa plgydkfsys wrskkgtkfh qsigkhyssg ygqgdvlgfy inlpedteta
      361 kslpdtykdk alikfksyly feekdfvdka ekslkqapgs qiiffkngvs qgvafkdife
      421 gvyfpaisly kgctvsinfg pyfkypprdi tyhpmsdmgw gavvehtlad vlyhvetevd
      481 grrsppwep
//
LOCUS       XP_041335381             381 aa            linear   VRT 06-MAY-2021
DEFINITION  nodal homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041335381
VERSION     XP_041335381.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479447.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="nodal homolog"
                     /calculated_mol_wt=41455
     Region          279..380
                     /region_name="TGF_beta_NODAL"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in Nodal (NODAL)-related proteins; cd13759"
                     /db_xref="CDD:381637"
     Site            order(286,288,292..293,295,305,307..309,326..327,330..331,
                     333..334,337,342..343,346,348..349,352,371..373,375)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381637"
     CDS             1..381
                     /gene="NODAL"
                     /coded_by="XM_041479447.1:114..1259"
                     /db_xref="GeneID:121360001"
ORIGIN      
        1 mrvplrsvpa lalcalallr lgcaptralt waptgaspra ltwaparapp rcpplmlqll
       61 rappaplraa aaaalslsph gslqngsrwa lsfdmsslss sqevslaqlr vrlpglsrar
      121 nvsldiyhsq rrrcrahgac ahqlflgtva gipsatqasw kvfevtnllr awlhqaalag
      181 hqspagrgqw evsaataapg dsghgdpalp qdvadsvlll vfskdkspge hslirtaets
      241 kyimrdsgsp gagarrqrrn rrerqrikaa aapreqgrsl crrvdmvvdf eqtgwgswiv
      301 ypkkynayrc eglcpspvde tfkptnhayi qsllqlykpn qvpcpscspv kmsplsmlyy
      361 ekgevvvrhh edmiieecgc n
//
LOCUS       XP_041335391             472 aa            linear   VRT 06-MAY-2021
DEFINITION  LETM1 domain-containing protein LETM2, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335391
VERSION     XP_041335391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="LETM1 domain-containing protein LETM2,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=52582
     Region          1..96
                     /region_name="LETM2_N"
                     /note="LETM1 domain-containing protein LETM2 N-terminus;
                     pfam19324"
                     /db_xref="CDD:466042"
     Region          170..376
                     /region_name="LETM1_RBD"
                     /note="LETM1-like, RBD; pfam07766"
                     /db_xref="CDD:462258"
     CDS             1..472
                     /gene="LETM2"
                     /coded_by="XM_041479457.1:287..1705"
                     /db_xref="GeneID:121360011"
ORIGIN      
        1 maacgcnall aaarasfrgs hllarcsplc spavalvqlv dpqlawtcrd srshfwprra
       61 clgaalprsp ahalhtsssp rqqlpgeslp qgkprnqgak aakspakqsv vapagrkplr
      121 qrmvdelkhy yngfhllwtd tkvaarmvwr llhgqvltrr errrllrtca dlfrlvpflv
      181 fvivpfmefl lpvflklfpe mlpstfetes kkeeklkkkl narlelakfl retiaemakr
      241 nkadlgkgkq lsfylheprp sgqqpstqev vrfsklfede ltlehlerpq lvalckllel
      301 qplgtnnllr fqllmrlrsi kaddemiake gvsglsvpel qsacrargmr slglseeqlk
      361 eqlgqwldlh lkenvpssll llsralylid lkpqsvpipq nktaeaagvm tsvlegqetl
      421 ldpapvvqgr kneefvsqpt eklpfseasv kpppqetkme asqsskagan ga
//
LOCUS       XP_041335398             404 aa            linear   VRT 06-MAY-2021
DEFINITION  LETM1 domain-containing protein LETM2, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335398
VERSION     XP_041335398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="LETM1 domain-containing protein LETM2,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=44699
     Region          1..96
                     /region_name="LETM2_N"
                     /note="LETM1 domain-containing protein LETM2 N-terminus;
                     pfam19324"
                     /db_xref="CDD:466042"
     Region          170..308
                     /region_name="LETM1_RBD"
                     /note="LETM1-like, RBD; pfam07766"
                     /db_xref="CDD:462258"
     CDS             1..404
                     /gene="LETM2"
                     /coded_by="XM_041479464.1:289..1503"
                     /db_xref="GeneID:121360011"
ORIGIN      
        1 maacgcnall aaarasfrgs hllarcsplc spavalvqlv dpqlawtcrd srshfwprra
       61 clgaalprsp ahalhtsssp rqqlpgeslp qgkprnqgak aakspakqsv vapagrkplr
      121 qrmvdelkhy yngfhllwtd tkvaarmvwr llhgqvltrr errrllrtca dlfrlvpflv
      181 fvivpfmefl lpvflklfpe mlpstfetes kkeeklkkkl narlelakfl retiaemakr
      241 nkadlgkgkq lsfylhemia kegvsglsvp elqsacrarg mrslglseeq lkeqlgqwld
      301 lhlkenvpss llllsralyl idlkpqsvpi pqnktaeaag vmtsvlegqe tlldpapvvq
      361 grkneefvsq pteklpfsea svkpppqetk measqsskag anga
//
LOCUS       XP_041335410             252 aa            linear   VRT 06-MAY-2021
DEFINITION  NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335410
VERSION     XP_041335410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..252
                     /product="NFU1 iron-sulfur cluster scaffold homolog,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=27943
     Region          57..144
                     /region_name="Nfu_N"
                     /note="Scaffold protein Nfu/NifU N terminal; smart00932"
                     /db_xref="CDD:214919"
     Region          63..237
                     /region_name="NifU"
                     /note="Fe-S cluster biogenesis protein NfuA,
                     4Fe-4S-binding domain [Posttranslational modification,
                     protein turnover, chaperones]; COG0694"
                     /db_xref="CDD:440458"
     CDS             1..252
                     /gene="NFU1"
                     /coded_by="XM_041479476.1:33..791"
                     /db_xref="GeneID:121360024"
ORIGIN      
        1 maaarrlcaa aglggrfchm llkdhhlttr qpfhqllqkk pslpsaawhr avrgmfiqtq
       61 dtpnpnslkf ipgrevlesr tmefstpaaa ycsplarqlf riegvksvff gpdfititkd
      121 sedldwnllk pdiyatimdf fasglpvvtd eaprtdtaas eeddevvlmi kelldtrirp
      181 tvqedggdvi ykgfedgivq lklqgsctsc psslitlksg iqnmlqfyip evegveqvfd
      241 ddddvekean st
//
LOCUS       XP_041335418             233 aa            linear   VRT 06-MAY-2021
DEFINITION  NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335418
VERSION     XP_041335418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479484.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="NFU1 iron-sulfur cluster scaffold homolog,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=26029
     Region          38..125
                     /region_name="Nfu_N"
                     /note="Scaffold protein Nfu/NifU N terminal; smart00932"
                     /db_xref="CDD:214919"
     Region          44..218
                     /region_name="NifU"
                     /note="Fe-S cluster biogenesis protein NfuA,
                     4Fe-4S-binding domain [Posttranslational modification,
                     protein turnover, chaperones]; COG0694"
                     /db_xref="CDD:440458"
     CDS             1..233
                     /gene="NFU1"
                     /coded_by="XM_041479484.1:245..946"
                     /db_xref="GeneID:121360024"
ORIGIN      
        1 mllkdhhltt rqpfhqllqk kpslpsaawh ravrgmfiqt qdtpnpnslk fipgrevles
       61 rtmefstpaa aycsplarql friegvksvf fgpdfititk dsedldwnll kpdiyatimd
      121 ffasglpvvt deaprtdtaa seeddevvlm ikelldtrir ptvqedggdv iykgfedgiv
      181 qlklqgscts cpsslitlks giqnmlqfyi pevegveqvf dddddvekea nst
//
LOCUS       XP_041335428             115 aa            linear   VRT 06-MAY-2021
DEFINITION  NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335428
VERSION     XP_041335428.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479494.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..115
                     /product="NFU1 iron-sulfur cluster scaffold homolog,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=12520
     Region          33..99
                     /region_name="NifU"
                     /note="NifU-like domain; pfam01106"
                     /db_xref="CDD:460066"
     CDS             1..115
                     /gene="NFU1"
                     /coded_by="XM_041479494.1:77..424"
                     /db_xref="GeneID:121360024"
ORIGIN      
        1 mdffasglpv vtdeaprtdt aaseeddevv lmikelldtr irptvqedgg dviykgfedg
       61 ivqlklqgsc tscpsslitl ksgiqnmlqf yipevegveq vfdddddvek eanst
//
LOCUS       XP_041335432             271 aa            linear   VRT 06-MAY-2021
DEFINITION  pyridoxal phosphate homeostasis protein [Pyrgilauda ruficollis].
ACCESSION   XP_041335432
VERSION     XP_041335432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="pyridoxal phosphate homeostasis protein"
                     /calculated_mol_wt=29209
     Region          16..247
                     /region_name="PLPDE_III_YBL036c_euk"
                     /note="Pyridoxal 5-phosphate (PLP)-binding TIM barrel
                     domain of Type III PLP-Dependent Enzymes, Eukaryotic
                     YBL036c-like proteins; cd06822"
                     /db_xref="CDD:143496"
     Site            order(44,46,67,93,180,182,224..225,240..243)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143496"
     Site            46
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143496"
     CDS             1..271
                     /gene="LOC121360042"
                     /coded_by="XM_041479498.1:26..841"
                     /db_xref="GeneID:121360042"
ORIGIN      
        1 mwragmaagd glgpalravt eqvqqaaarr pqglpavqpr lvavsktkpa emvmeayshg
       61 qrsfgenyvq ellekasdsr ilsscpdikw hfighlqknn vnkliavpnl fmletvdsvk
      121 ladrvnsswq kkgssqklkv mvqvntsged skhglaprdt taavehvink cpslefvglm
      181 tigsighdls kgpnpdfqvl lslrqevcek lnlpldkvel smgmstdfqh aievgstnvr
      241 igstifgerd ysnkapaggg gqteavtvqg h
//
LOCUS       XP_041335443             283 aa            linear   VRT 06-MAY-2021
DEFINITION  steroidogenic acute regulatory protein, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335443
VERSION     XP_041335443.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479509.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="steroidogenic acute regulatory protein,
                     mitochondrial"
                     /calculated_mol_wt=31417
     Region          70..278
                     /region_name="START_STARD1-like"
                     /note="Cholesterol-binding START domain of mammalian
                     STARD1 and related proteins; cd08905"
                     /db_xref="CDD:176914"
     Site            order(99..100,108,120,122,133,137,144,147..148,150..151,
                     169,171..174,179,182,184,186,201,218,220..223,225,239,241,
                     243,245,247,249,256,258..260,262..264,267..268,271)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176914"
     CDS             1..283
                     /gene="STAR"
                     /coded_by="XM_041479509.1:1..852"
                     /db_xref="GeneID:121360053"
ORIGIN      
        1 mlpatsklca aisyrhlrnm tglrrqaava isqelsrlas rspgpsawih qvrrrsslls
       61 srleekpfse temsyikqge ealqkslril edqddwktet vagngdkvls kvlpdvgkvf
      121 rlevvvdqpl drvygelvdn meqmgdwnpn vkevrileki gkdtvithek aaatpgnivg
      181 prdfvsvrcs rrrgstcvla gmsttygamp eqegfiraen gptcmvlrpl pgspsqtrlt
      241 wllsidlkgw lpktiinqvl sqtqvdfakh lrqrlarsvp aac
//
LOCUS       XP_041335455             117 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4E-binding protein 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335455
VERSION     XP_041335455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..117
                     /product="eukaryotic translation initiation factor
                     4E-binding protein 1 isoform X1"
                     /calculated_mol_wt=12278
     Region          9..117
                     /region_name="eIF_4EBP"
                     /note="Eukaryotic translation initiation factor 4E binding
                     protein (EIF4EBP); pfam05456"
                     /db_xref="CDD:461656"
     CDS             1..117
                     /gene="EIF4EBP1"
                     /coded_by="XM_041479521.1:87..440"
                     /db_xref="GeneID:121360057"
ORIGIN      
        1 msgrcchgqt psrdipgpgk clalpdgapl ppgdysttpg gtvfgttpgg triiydrkfl
       61 mecrnspgak tppsdlpdip gvtspsveel klenhhvqnc eekvsaagee eqfdmdi
//
LOCUS       XP_041335463             116 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4E-binding protein 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335463
VERSION     XP_041335463.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479529.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..116
                     /product="eukaryotic translation initiation factor
                     4E-binding protein 1 isoform X2"
                     /calculated_mol_wt=12207
     Region          9..116
                     /region_name="eIF_4EBP"
                     /note="Eukaryotic translation initiation factor 4E binding
                     protein (EIF4EBP); pfam05456"
                     /db_xref="CDD:461656"
     CDS             1..116
                     /gene="EIF4EBP1"
                     /coded_by="XM_041479529.1:87..437"
                     /db_xref="GeneID:121360057"
ORIGIN      
        1 msgrcchgqt psrdipgpgk clalpdgapl ppgdysttpg gtvfgttpgg triiydrkfl
       61 mecrnspgak tppsdlpdip gvtspsveel klenhhvqnc eekvsageee qfdmdi
//
LOCUS       XP_041335476            1523 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335476
VERSION     XP_041335476.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479542.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1523
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X1"
                     /calculated_mol_wt=169355
     Region          <3..173
                     /region_name="PBP1"
                     /note="PAB1-binding protein, interacts with
                     poly(A)-binding protein [RNA processing and modification];
                     COG5180"
                     /db_xref="CDD:444064"
     Region          357..486
                     /region_name="PWWP_NSD3_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20163"
                     /db_xref="CDD:438991"
     Site            order(370,373,401)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438991"
     Site            371..374
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438991"
     Site            order(438..440,443..444)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438991"
     Region          <696..831
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          788..831
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(788,798..802,807,825)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          836..882
                     /region_name="PHD2_NSD3"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15652"
                     /db_xref="CDD:277122"
     Site            order(836,846..850,856,877)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277122"
     Region          883..935
                     /region_name="PHD3_NSD3"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15655"
                     /db_xref="CDD:277125"
     Site            order(883,900..904,908,930)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277125"
     Region          1003..1038
                     /region_name="PHD4_NSD3"
                     /note="PHD finger 4 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15658"
                     /db_xref="CDD:277128"
     Site            order(1008..1012,1016,1033)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277128"
     Region          1045..1139
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(1057,1060,1088)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            1058..1061
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          1190..1228
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1230..1371
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(1241..1243,1260,1270,1274,1283..1289,1306..1310,
                     1317..1319,1334,1345..1355,1357..1361,1370)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(1241..1243,1283..1286,1306..1310,1347,1354,
                     1358..1361,1370)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(1260,1270,1274,1285..1289,1317..1319,1334,
                     1345..1349)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(1312,1359,1361,1366)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1409..1451
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1409,1418..1422,1428,1446)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1450..1499
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1523
                     /gene="NSD3"
                     /coded_by="XM_041479542.1:42..4613"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mllrelrrhr gggagpraqp gqgtarsgqa paqrrdagsp grpraprsgp aaltgaeprr
       61 aagekfgvsp agvtvprppq leerrftarg kscasaqgim gntiqqppql idsanirqee
      121 afdgssdiae dggrtpyeaa lqqgfqyptp taeelppltn gyppaismye pqakyqtysq
      181 ypngsangfg tgrnfsppey yqlensnarp hevvekpspp qpppppppsa pqvgipkktg
      241 speiklkitk tiqngrelfe sslcgdllne vqareyakak hegrkekrkk sskhdssrse
      301 erkshkipkl epeeqnrpne rlstlserpr edavleeapv qqlvpslptq vthdvkfqvg
      361 dlvwskvgty pwwpcmvscd pqldvhtkin trgareyhvq ffsnqperaw vhekrvreyq
      421 ghkqyeqlla eaakqasnhs ekqkirkprp qreraqwdig iahaekalkm treerieqyt
      481 fiyvdqepee alakakktaa skseakknrr pkaapssqpe hagvaagssp chgerrqgqr
      541 rhssleeeea ppvkiawkta aarkslpasi tmhnldlqkc nmspvvkieq vfalqnaagd
      601 gklidqfvys tkgvgnktei svkgqekvns ssaqrsekav vqnasspett sgaagsvekk
      661 qqrrsirtrs esekstevvp kkkikkeqve avplaavktg lqkgaseisd sckplkkrsr
      721 astdmeltss ayrdtsdsds rglndlqgsf gkrsdspsat adadasdvqs vdsslsrrgt
      781 gtskkdtvcq icessgesll acegeccsmf hleclglkam peekfictec kngehtcfsc
      841 klpgkdvkrc svstcgkfyh eacvrkfata lfesrgfrcp qhcctacsmd kdmhkaskgr
      901 marclrcpva yhsgdgciaa gslfvsshil icsnhskrth sssavnvgfc fvcarglvvq
      961 dhsdplfssy aykshyllne snraelmklp mipppssask kkcekggkll ccescpasfh
     1021 peclsiempe gcwncndcka gkklrykqiv wvklgnyrww paeicnprsv plniqglkhd
     1081 igdfpvfffg shdyywvhqg rvfpyvegdk sfaegqtsin ktfkkaleea akrfqelkaq
     1141 reskealeie rnsrkpppyk hiksnkvigk vqiqvadlse iprcnckpsd enpcglesec
     1201 lnrmlqyech pqvcpagerc qnqcftkrly pdaeiikter rgwglrtkrs ikkgefvney
     1261 vgelideeec rlrikrahen svtnfymltv tkdriidagp kgnysrfmnh scnpncetqk
     1321 wtvngdirvg lfalcdipag meltfnynld clgngrtech cgaencsgfl gvrpktafat
     1381 aneekvknak lkqkkrkikt eqkqmhednc fqcgdggelv mcdkkdcpka yhllclnltq
     1441 ppfgkwecpw hqcdicsnpa vsfcefcphs fckdhekgal vpsaldgrlc csahdpkspv
     1501 apeywskikc kleaqnavee ake
//
LOCUS       XP_041335486            1473 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335486
VERSION     XP_041335486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1473
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X2"
                     /calculated_mol_wt=163736
     Region          <3..173
                     /region_name="PBP1"
                     /note="PAB1-binding protein, interacts with
                     poly(A)-binding protein [RNA processing and modification];
                     COG5180"
                     /db_xref="CDD:444064"
     Region          357..486
                     /region_name="PWWP_NSD3_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20163"
                     /db_xref="CDD:438991"
     Site            order(370,373,401)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438991"
     Site            371..374
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438991"
     Site            order(438..440,443..444)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438991"
     Region          <696..831
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          788..831
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(788,798..802,807,825)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          836..882
                     /region_name="PHD2_NSD3"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15652"
                     /db_xref="CDD:277122"
     Site            order(836,846..850,856,877)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277122"
     Region          883..935
                     /region_name="PHD3_NSD3"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15655"
                     /db_xref="CDD:277125"
     Site            order(883,900..904,908,930)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277125"
     Region          949..988
                     /region_name="PHD4_NSD3"
                     /note="PHD finger 4 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15658"
                     /db_xref="CDD:277128"
     Site            order(949,958..962,966,983)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277128"
     Region          995..1089
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(1007,1010,1038)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            1008..1011
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          1140..1178
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1180..1321
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(1191..1193,1210,1220,1224,1233..1239,1256..1260,
                     1267..1269,1284,1295..1305,1307..1311,1320)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(1191..1193,1233..1236,1256..1260,1297,1304,
                     1308..1311,1320)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(1210,1220,1224,1235..1239,1267..1269,1284,
                     1295..1299)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(1262,1309,1311,1316)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1359..1401
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1359,1368..1372,1378,1396)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1400..1449
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1473
                     /gene="NSD3"
                     /coded_by="XM_041479552.1:42..4463"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mllrelrrhr gggagpraqp gqgtarsgqa paqrrdagsp grpraprsgp aaltgaeprr
       61 aagekfgvsp agvtvprppq leerrftarg kscasaqgim gntiqqppql idsanirqee
      121 afdgssdiae dggrtpyeaa lqqgfqyptp taeelppltn gyppaismye pqakyqtysq
      181 ypngsangfg tgrnfsppey yqlensnarp hevvekpspp qpppppppsa pqvgipkktg
      241 speiklkitk tiqngrelfe sslcgdllne vqareyakak hegrkekrkk sskhdssrse
      301 erkshkipkl epeeqnrpne rlstlserpr edavleeapv qqlvpslptq vthdvkfqvg
      361 dlvwskvgty pwwpcmvscd pqldvhtkin trgareyhvq ffsnqperaw vhekrvreyq
      421 ghkqyeqlla eaakqasnhs ekqkirkprp qreraqwdig iahaekalkm treerieqyt
      481 fiyvdqepee alakakktaa skseakknrr pkaapssqpe hagvaagssp chgerrqgqr
      541 rhssleeeea ppvkiawkta aarkslpasi tmhnldlqkc nmspvvkieq vfalqnaagd
      601 gklidqfvys tkgvgnktei svkgqekvns ssaqrsekav vqnasspett sgaagsvekk
      661 qqrrsirtrs esekstevvp kkkikkeqve avplaavktg lqkgaseisd sckplkkrsr
      721 astdmeltss ayrdtsdsds rglndlqgsf gkrsdspsat adadasdvqs vdsslsrrgt
      781 gtskkdtvcq icessgesll acegeccsmf hleclglkam peekfictec kngehtcfsc
      841 klpgkdvkrc svstcgkfyh eacvrkfata lfesrgfrcp qhcctacsmd kdmhkaskgr
      901 marclrcpva yhsgdgciaa gslfvsshil icsnhskrth sssavnvgfc fvcarggkll
      961 ccescpasfh peclsiempe gcwncndcka gkklrykqiv wvklgnyrww paeicnprsv
     1021 plniqglkhd igdfpvfffg shdyywvhqg rvfpyvegdk sfaegqtsin ktfkkaleea
     1081 akrfqelkaq reskealeie rnsrkpppyk hiksnkvigk vqiqvadlse iprcnckpsd
     1141 enpcglesec lnrmlqyech pqvcpagerc qnqcftkrly pdaeiikter rgwglrtkrs
     1201 ikkgefvney vgelideeec rlrikrahen svtnfymltv tkdriidagp kgnysrfmnh
     1261 scnpncetqk wtvngdirvg lfalcdipag meltfnynld clgngrtech cgaencsgfl
     1321 gvrpktafat aneekvknak lkqkkrkikt eqkqmhednc fqcgdggelv mcdkkdcpka
     1381 yhllclnltq ppfgkwecpw hqcdicsnpa vsfcefcphs fckdhekgal vpsaldgrlc
     1441 csahdpkspv apeywskikc kleaqnavee ake
//
LOCUS       XP_041335493            1454 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335493
VERSION     XP_041335493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479559.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1454
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X3"
                     /calculated_mol_wt=162575
     Region          269..398
                     /region_name="PWWP_NSD3_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20163"
                     /db_xref="CDD:438991"
     Site            order(282,285,313)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438991"
     Site            283..286
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438991"
     Region          325..700
                     /region_name="TolA"
                     /note="Membrane protein TolA involved in colicin uptake
                     [Cell wall/membrane/envelope biogenesis]; COG3064"
                     /db_xref="CDD:442298"
     Site            order(350..352,355..356)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438991"
     Region          <608..743
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          700..743
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(700,710..714,719,737)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          748..794
                     /region_name="PHD2_NSD3"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15652"
                     /db_xref="CDD:277122"
     Site            order(748,758..762,768,789)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277122"
     Region          795..847
                     /region_name="PHD3_NSD3"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15655"
                     /db_xref="CDD:277125"
     Site            order(795,812..816,820,842)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277125"
     Region          937..969
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(940..943,947,964)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277128"
     Region          976..1070
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(988,991,1019)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            989..992
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          1121..1159
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1161..1302
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(1172..1174,1191,1201,1205,1214..1220,1237..1241,
                     1248..1250,1265,1276..1286,1288..1292,1301)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(1172..1174,1214..1217,1237..1241,1278,1285,
                     1289..1292,1301)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(1191,1201,1205,1216..1220,1248..1250,1265,
                     1276..1280)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(1243,1290,1292,1297)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1340..1382
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1340,1349..1353,1359,1377)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1381..1430
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1454
                     /gene="NSD3"
                     /coded_by="XM_041479559.1:212..4576"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mdfsfsfmqg imgntiqqpp qlidsanirq eeafdgssdi aedggrtpye aalqqgfqyp
       61 tptaeelppl tngyppaism yepqakyqty sqypngsang fgtgrnfspp eyyqlensna
      121 rphevvekps ppqppppppp sapqvgipkk tgspeiklki tktiqngrel fesslcgdll
      181 nevqareyak akhegrkekr kksskhdssr seerkshkip klepeeqnrp nerlstlser
      241 predavleea pvqqlvpslp tqvthdvkfq vgdlvwskvg typwwpcmvs cdpqldvhtk
      301 intrgareyh vqffsnqper awvhekrvre yqghkqyeql laeaakqasn hsekqkirkp
      361 rpqreraqwd igiahaekal kmtreerieq ytfiyvdqep eealakakkt aaskseakkn
      421 rrpkaapssq pehagvaags spchgerrqg qrrhssleee eappvkiawk taaarkslpa
      481 sitmhnldlq kcnmspvvki eqvfalqnaa gdgklidqfv ystkgvgnkt eisvkgqekv
      541 nsssaqrsek avvqnasspe ttsgaagsve kkqqrrsirt rsesekstev vpkkkikkeq
      601 veavplaavk tglqkgasei sdsckplkkr srastdmelt ssayrdtsds dsrglndlqg
      661 sfgkrsdsps atadadasdv qsvdsslsrr gtgtskkdtv cqicessges llacegeccs
      721 mfhleclglk ampeekfict eckngehtcf scklpgkdvk rcsvstcgkf yheacvrkfa
      781 talfesrgfr cpqhcctacs mdkdmhkask grmarclrcp vayhsgdgci aagslfvssh
      841 ilicsnhskr thsssavnvg fcfvcarglv vqdhsdplfs syaykshyll nesnraelmk
      901 lpmipppssa skkkcekeiw fpgsvqsrcp isqpklggkl lccescpasf hpeclsiemp
      961 egcwncndck agkklrykqi vwvklgnyrw wpaeicnprs vplniqglkh digdfpvfff
     1021 gshdyywvhq grvfpyvegd ksfaegqtsi nktfkkalee aakrfqelka qreskealei
     1081 ernsrkpppy khiksnkvig kvqiqvadls eiprcnckps denpcglese clnrmlqyec
     1141 hpqvcpager cqnqcftkrl ypdaeiikte rrgwglrtkr sikkgefvne yvgelideee
     1201 crlrikrahe nsvtnfymlt vtkdriidag pkgnysrfmn hscnpncetq kwtvngdirv
     1261 glfalcdipa gmeltfnynl dclgngrtec hcgaencsgf lgvrpktafa taneekvkna
     1321 klkqkkrkik teqkqmhedn cfqcgdggel vmcdkkdcpk ayhllclnlt qppfgkwecp
     1381 whqcdicsnp avsfcefcph sfckdhekga lvpsaldgrl ccsahdpksp vapeywskik
     1441 ckleaqnave eake
//
LOCUS       XP_041335497            1435 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335497
VERSION     XP_041335497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1435
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X4"
                     /calculated_mol_wt=160421
     Region          269..398
                     /region_name="PWWP_NSD3_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20163"
                     /db_xref="CDD:438991"
     Site            order(282,285,313)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438991"
     Site            283..286
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438991"
     Region          325..700
                     /region_name="TolA"
                     /note="Membrane protein TolA involved in colicin uptake
                     [Cell wall/membrane/envelope biogenesis]; COG3064"
                     /db_xref="CDD:442298"
     Site            order(350..352,355..356)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438991"
     Region          <608..743
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          700..743
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(700,710..714,719,737)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          748..794
                     /region_name="PHD2_NSD3"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15652"
                     /db_xref="CDD:277122"
     Site            order(748,758..762,768,789)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277122"
     Region          795..847
                     /region_name="PHD3_NSD3"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15655"
                     /db_xref="CDD:277125"
     Site            order(795,812..816,820,842)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277125"
     Region          915..950
                     /region_name="PHD4_NSD3"
                     /note="PHD finger 4 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15658"
                     /db_xref="CDD:277128"
     Site            order(920..924,928,945)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277128"
     Region          957..1051
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(969,972,1000)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            970..973
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          1102..1140
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1142..1283
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(1153..1155,1172,1182,1186,1195..1201,1218..1222,
                     1229..1231,1246,1257..1267,1269..1273,1282)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(1153..1155,1195..1198,1218..1222,1259,1266,
                     1270..1273,1282)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(1172,1182,1186,1197..1201,1229..1231,1246,
                     1257..1261)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(1224,1271,1273,1278)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1321..1363
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1321,1330..1334,1340,1358)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1362..1411
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1435
                     /gene="NSD3"
                     /coded_by="XM_041479563.1:212..4519"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mdfsfsfmqg imgntiqqpp qlidsanirq eeafdgssdi aedggrtpye aalqqgfqyp
       61 tptaeelppl tngyppaism yepqakyqty sqypngsang fgtgrnfspp eyyqlensna
      121 rphevvekps ppqppppppp sapqvgipkk tgspeiklki tktiqngrel fesslcgdll
      181 nevqareyak akhegrkekr kksskhdssr seerkshkip klepeeqnrp nerlstlser
      241 predavleea pvqqlvpslp tqvthdvkfq vgdlvwskvg typwwpcmvs cdpqldvhtk
      301 intrgareyh vqffsnqper awvhekrvre yqghkqyeql laeaakqasn hsekqkirkp
      361 rpqreraqwd igiahaekal kmtreerieq ytfiyvdqep eealakakkt aaskseakkn
      421 rrpkaapssq pehagvaags spchgerrqg qrrhssleee eappvkiawk taaarkslpa
      481 sitmhnldlq kcnmspvvki eqvfalqnaa gdgklidqfv ystkgvgnkt eisvkgqekv
      541 nsssaqrsek avvqnasspe ttsgaagsve kkqqrrsirt rsesekstev vpkkkikkeq
      601 veavplaavk tglqkgasei sdsckplkkr srastdmelt ssayrdtsds dsrglndlqg
      661 sfgkrsdsps atadadasdv qsvdsslsrr gtgtskkdtv cqicessges llacegeccs
      721 mfhleclglk ampeekfict eckngehtcf scklpgkdvk rcsvstcgkf yheacvrkfa
      781 talfesrgfr cpqhcctacs mdkdmhkask grmarclrcp vayhsgdgci aagslfvssh
      841 ilicsnhskr thsssavnvg fcfvcarglv vqdhsdplfs syaykshyll nesnraelmk
      901 lpmipppssa skkkcekggk llccescpas fhpeclsiem pegcwncndc kagkklrykq
      961 ivwvklgnyr wwpaeicnpr svplniqglk hdigdfpvff fgshdyywvh qgrvfpyveg
     1021 dksfaegqts inktfkkale eaakrfqelk aqreskeale iernsrkppp ykhiksnkvi
     1081 gkvqiqvadl seiprcnckp sdenpcgles eclnrmlqye chpqvcpage rcqnqcftkr
     1141 lypdaeiikt errgwglrtk rsikkgefvn eyvgelidee ecrlrikrah ensvtnfyml
     1201 tvtkdriida gpkgnysrfm nhscnpncet qkwtvngdir vglfalcdip agmeltfnyn
     1261 ldclgngrte chcgaencsg flgvrpktaf ataneekvkn aklkqkkrki kteqkqmhed
     1321 ncfqcgdgge lvmcdkkdcp kayhllclnl tqppfgkwec pwhqcdicsn pavsfcefcp
     1381 hsfckdhekg alvpsaldgr lccsahdpks pvapeywski kckleaqnav eeake
//
LOCUS       XP_041335508            1431 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335508
VERSION     XP_041335508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1431
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X5"
                     /calculated_mol_wt=159928
     Region          246..375
                     /region_name="PWWP_NSD3_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20163"
                     /db_xref="CDD:438991"
     Site            order(259,262,290)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438991"
     Site            260..263
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438991"
     Region          302..677
                     /region_name="TolA"
                     /note="Membrane protein TolA involved in colicin uptake
                     [Cell wall/membrane/envelope biogenesis]; COG3064"
                     /db_xref="CDD:442298"
     Site            order(327..329,332..333)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438991"
     Region          <585..720
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          677..720
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(677,687..691,696,714)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          725..771
                     /region_name="PHD2_NSD3"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15652"
                     /db_xref="CDD:277122"
     Site            order(725,735..739,745,766)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277122"
     Region          772..824
                     /region_name="PHD3_NSD3"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15655"
                     /db_xref="CDD:277125"
     Site            order(772,789..793,797,819)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277125"
     Region          914..946
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(917..920,924,941)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277128"
     Region          953..1047
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(965,968,996)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            966..969
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          1098..1136
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1138..1279
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(1149..1151,1168,1178,1182,1191..1197,1214..1218,
                     1225..1227,1242,1253..1263,1265..1269,1278)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(1149..1151,1191..1194,1214..1218,1255,1262,
                     1266..1269,1278)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(1168,1178,1182,1193..1197,1225..1227,1242,
                     1253..1257)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(1220,1267,1269,1274)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1317..1359
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1317,1326..1330,1336,1354)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1358..1407
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1431
                     /gene="NSD3"
                     /coded_by="XM_041479574.1:212..4507"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mdfsfsfmqg imgntiqqpp qlidsanirq eeafdgssdi aedggrtpye aalqqgfqyp
       61 tptaeelppl tngyppaism yepqakyqty sqypngsang fgtgrnfspp eyyqlensna
      121 rphevvekps ppqppppppp sapqvgipkk tgspeiklki tktiqngrel fesslcgdll
      181 nevqareyak akhegrkekr kksskhdssr seerkshkip klepeeqnvq qlvpslptqv
      241 thdvkfqvgd lvwskvgtyp wwpcmvscdp qldvhtkint rgareyhvqf fsnqperawv
      301 hekrvreyqg hkqyeqllae aakqasnhse kqkirkprpq reraqwdigi ahaekalkmt
      361 reerieqytf iyvdqepeea lakakktaas kseakknrrp kaapssqpeh agvaagsspc
      421 hgerrqgqrr hssleeeeap pvkiawktaa arkslpasit mhnldlqkcn mspvvkieqv
      481 falqnaagdg klidqfvyst kgvgnkteis vkgqekvnss saqrsekavv qnasspetts
      541 gaagsvekkq qrrsirtrse sekstevvpk kkikkeqvea vplaavktgl qkgaseisds
      601 ckplkkrsra stdmeltssa yrdtsdsdsr glndlqgsfg krsdspsata dadasdvqsv
      661 dsslsrrgtg tskkdtvcqi cessgeslla cegeccsmfh leclglkamp eekficteck
      721 ngehtcfsck lpgkdvkrcs vstcgkfyhe acvrkfatal fesrgfrcpq hcctacsmdk
      781 dmhkaskgrm arclrcpvay hsgdgciaag slfvsshili csnhskrths ssavnvgfcf
      841 vcarglvvqd hsdplfssya ykshyllnes nraelmklpm ipppssaskk kcekeiwfpg
      901 svqsrcpisq pklggkllcc escpasfhpe clsiempegc wncndckagk klrykqivwv
      961 klgnyrwwpa eicnprsvpl niqglkhdig dfpvfffgsh dyywvhqgrv fpyvegdksf
     1021 aegqtsinkt fkkaleeaak rfqelkaqre skealeiern srkpppykhi ksnkvigkvq
     1081 iqvadlseip rcnckpsden pcglesecln rmlqyechpq vcpagercqn qcftkrlypd
     1141 aeiikterrg wglrtkrsik kgefvneyvg elideeecrl rikrahensv tnfymltvtk
     1201 driidagpkg nysrfmnhsc npncetqkwt vngdirvglf alcdipagme ltfnynldcl
     1261 gngrtechcg aencsgflgv rpktafatan eekvknaklk qkkrkikteq kqmhedncfq
     1321 cgdggelvmc dkkdcpkayh llclnltqpp fgkwecpwhq cdicsnpavs fcefcphsfc
     1381 kdhekgalvp saldgrlccs ahdpkspvap eywskikckl eaqnaveeak e
//
LOCUS       XP_041335516            1385 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335516
VERSION     XP_041335516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1385
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X6"
                     /calculated_mol_wt=154802
     Region          269..398
                     /region_name="PWWP_NSD3_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20163"
                     /db_xref="CDD:438991"
     Site            order(282,285,313)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438991"
     Site            283..286
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438991"
     Region          325..700
                     /region_name="TolA"
                     /note="Membrane protein TolA involved in colicin uptake
                     [Cell wall/membrane/envelope biogenesis]; COG3064"
                     /db_xref="CDD:442298"
     Site            order(350..352,355..356)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438991"
     Region          <608..743
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          700..743
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(700,710..714,719,737)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          748..794
                     /region_name="PHD2_NSD3"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15652"
                     /db_xref="CDD:277122"
     Site            order(748,758..762,768,789)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277122"
     Region          795..847
                     /region_name="PHD3_NSD3"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15655"
                     /db_xref="CDD:277125"
     Site            order(795,812..816,820,842)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277125"
     Region          861..900
                     /region_name="PHD4_NSD3"
                     /note="PHD finger 4 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15658"
                     /db_xref="CDD:277128"
     Site            order(861,870..874,878,895)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277128"
     Region          907..1001
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(919,922,950)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            920..923
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          1052..1090
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1092..1233
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(1103..1105,1122,1132,1136,1145..1151,1168..1172,
                     1179..1181,1196,1207..1217,1219..1223,1232)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(1103..1105,1145..1148,1168..1172,1209,1216,
                     1220..1223,1232)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(1122,1132,1136,1147..1151,1179..1181,1196,
                     1207..1211)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(1174,1221,1223,1228)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1271..1313
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1271,1280..1284,1290,1308)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1312..1361
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1385
                     /gene="NSD3"
                     /coded_by="XM_041479582.1:212..4369"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mdfsfsfmqg imgntiqqpp qlidsanirq eeafdgssdi aedggrtpye aalqqgfqyp
       61 tptaeelppl tngyppaism yepqakyqty sqypngsang fgtgrnfspp eyyqlensna
      121 rphevvekps ppqppppppp sapqvgipkk tgspeiklki tktiqngrel fesslcgdll
      181 nevqareyak akhegrkekr kksskhdssr seerkshkip klepeeqnrp nerlstlser
      241 predavleea pvqqlvpslp tqvthdvkfq vgdlvwskvg typwwpcmvs cdpqldvhtk
      301 intrgareyh vqffsnqper awvhekrvre yqghkqyeql laeaakqasn hsekqkirkp
      361 rpqreraqwd igiahaekal kmtreerieq ytfiyvdqep eealakakkt aaskseakkn
      421 rrpkaapssq pehagvaags spchgerrqg qrrhssleee eappvkiawk taaarkslpa
      481 sitmhnldlq kcnmspvvki eqvfalqnaa gdgklidqfv ystkgvgnkt eisvkgqekv
      541 nsssaqrsek avvqnasspe ttsgaagsve kkqqrrsirt rsesekstev vpkkkikkeq
      601 veavplaavk tglqkgasei sdsckplkkr srastdmelt ssayrdtsds dsrglndlqg
      661 sfgkrsdsps atadadasdv qsvdsslsrr gtgtskkdtv cqicessges llacegeccs
      721 mfhleclglk ampeekfict eckngehtcf scklpgkdvk rcsvstcgkf yheacvrkfa
      781 talfesrgfr cpqhcctacs mdkdmhkask grmarclrcp vayhsgdgci aagslfvssh
      841 ilicsnhskr thsssavnvg fcfvcarggk llccescpas fhpeclsiem pegcwncndc
      901 kagkklrykq ivwvklgnyr wwpaeicnpr svplniqglk hdigdfpvff fgshdyywvh
      961 qgrvfpyveg dksfaegqts inktfkkale eaakrfqelk aqreskeale iernsrkppp
     1021 ykhiksnkvi gkvqiqvadl seiprcnckp sdenpcgles eclnrmlqye chpqvcpage
     1081 rcqnqcftkr lypdaeiikt errgwglrtk rsikkgefvn eyvgelidee ecrlrikrah
     1141 ensvtnfyml tvtkdriida gpkgnysrfm nhscnpncet qkwtvngdir vglfalcdip
     1201 agmeltfnyn ldclgngrte chcgaencsg flgvrpktaf ataneekvkn aklkqkkrki
     1261 kteqkqmhed ncfqcgdgge lvmcdkkdcp kayhllclnl tqppfgkwec pwhqcdicsn
     1321 pavsfcefcp hsfckdhekg alvpsaldgr lccsahdpks pvapeywski kckleaqnav
     1381 eeake
//
LOCUS       XP_041335526            1167 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335526
VERSION     XP_041335526.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479592.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1167
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1167
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X7"
                     /calculated_mol_wt=130421
     Region          1..111
                     /region_name="PWWP"
                     /note="PWWP (Pro-Trp-Trp-Pro) domain; cl02554"
                     /db_xref="CDD:470613"
     Region          38..413
                     /region_name="TolA"
                     /note="Membrane protein TolA involved in colicin uptake
                     [Cell wall/membrane/envelope biogenesis]; COG3064"
                     /db_xref="CDD:442298"
     Region          <321..456
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          413..456
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(413,423..427,432,450)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          461..507
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(461,472..475,481,502)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          508..560
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(508,526..529,533,555)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     Region          650..682
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(653..656,660,677)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277128"
     Region          689..783
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(701,704,732)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            702..705
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          834..872
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          874..1015
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(885..887,904,914,918,927..933,950..954,961..963,978,
                     989..999,1001..1005,1014)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(885..887,927..930,950..954,991,998,1002..1005,1014)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(904,914,918,929..933,961..963,978,989..993)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(956,1003,1005,1010)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1053..1095
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1053,1062..1066,1072,1090)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1094..1143
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1167
                     /gene="NSD3"
                     /coded_by="XM_041479592.1:276..3779"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mvscdpqldv htkintrgar eyhvqffsnq perawvhekr vreyqghkqy eqllaeaakq
       61 asnhsekqki rkprpqrera qwdigiahae kalkmtreer ieqytfiyvd qepeealaka
      121 kktaasksea kknrrpkaap ssqpehagva agsspchger rqgqrrhssl eeeeappvki
      181 awktaaarks lpasitmhnl dlqkcnmspv vkieqvfalq naagdgklid qfvystkgvg
      241 nkteisvkgq ekvnsssaqr sekavvqnas spettsgaag svekkqqrrs irtrseseks
      301 tevvpkkkik keqveavpla avktglqkga seisdsckpl kkrsrastdm eltssayrdt
      361 sdsdsrglnd lqgsfgkrsd spsatadada sdvqsvdssl srrgtgtskk dtvcqicess
      421 gesllacege ccsmfhlecl glkampeekf icteckngeh tcfscklpgk dvkrcsvstc
      481 gkfyheacvr kfatalfesr gfrcpqhcct acsmdkdmhk askgrmarcl rcpvayhsgd
      541 gciaagslfv sshilicsnh skrthsssav nvgfcfvcar glvvqdhsdp lfssyayksh
      601 yllnesnrae lmklpmippp ssaskkkcek eiwfpgsvqs rcpisqpklg gkllccescp
      661 asfhpeclsi empegcwncn dckagkklry kqivwvklgn yrwwpaeicn prsvplniqg
      721 lkhdigdfpv fffgshdyyw vhqgrvfpyv egdksfaegq tsinktfkka leeaakrfqe
      781 lkaqreskea leiernsrkp ppykhiksnk vigkvqiqva dlseiprcnc kpsdenpcgl
      841 eseclnrmlq yechpqvcpa gercqnqcft krlypdaeii kterrgwglr tkrsikkgef
      901 vneyvgelid eeecrlrikr ahensvtnfy mltvtkdrii dagpkgnysr fmnhscnpnc
      961 etqkwtvngd irvglfalcd ipagmeltfn ynldclgngr techcgaenc sgflgvrpkt
     1021 afataneekv knaklkqkkr kikteqkqmh edncfqcgdg gelvmcdkkd cpkayhllcl
     1081 nltqppfgkw ecpwhqcdic snpavsfcef cphsfckdhe kgalvpsald grlccsahdp
     1141 kspvapeyws kikckleaqn aveeake
//
LOCUS       XP_041335535            1412 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase NSD3 isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335535
VERSION     XP_041335535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1412
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1412
                     /product="histone-lysine N-methyltransferase NSD3 isoform
                     X8"
                     /calculated_mol_wt=157774
     Region          246..375
                     /region_name="PWWP_NSD3_rpt1"
                     /note="first PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20163"
                     /db_xref="CDD:438991"
     Site            order(259,262,290)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438991"
     Site            260..263
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438991"
     Region          302..677
                     /region_name="TolA"
                     /note="Membrane protein TolA involved in colicin uptake
                     [Cell wall/membrane/envelope biogenesis]; COG3064"
                     /db_xref="CDD:442298"
     Site            order(327..329,332..333)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438991"
     Region          <585..720
                     /region_name="TNG2"
                     /note="Chromatin remodeling protein, contains PhD zinc
                     finger [Chromatin structure and dynamics]; COG5034"
                     /db_xref="CDD:227367"
     Region          677..720
                     /region_name="PHD1_NSD3"
                     /note="PHD finger 1 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15649"
                     /db_xref="CDD:277119"
     Site            order(677,687..691,696,714)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277119"
     Region          725..771
                     /region_name="PHD2_NSD3"
                     /note="PHD finger 2 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15652"
                     /db_xref="CDD:277122"
     Site            order(725,735..739,745,766)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277122"
     Region          772..824
                     /region_name="PHD3_NSD3"
                     /note="PHD finger 3 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15655"
                     /db_xref="CDD:277125"
     Site            order(772,789..793,797,819)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277125"
     Region          892..927
                     /region_name="PHD4_NSD3"
                     /note="PHD finger 4 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15658"
                     /db_xref="CDD:277128"
     Site            order(897..901,905,922)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277128"
     Region          934..1028
                     /region_name="PWWP_NSD3_rpt2"
                     /note="second PWWP domain found in nuclear SET
                     domain-containing protein 3 (NSD3) and similar proteins;
                     cd20166"
                     /db_xref="CDD:438994"
     Site            order(946,949,977)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438994"
     Site            947..950
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438994"
     Region          1079..1117
                     /region_name="AWS"
                     /note="AWS domain; pfam17907"
                     /db_xref="CDD:465559"
     Region          1119..1260
                     /region_name="SET_NSD3"
                     /note="SET domain (including post-SET domain) found in
                     nuclear receptor-binding SET domain-containing protein 3
                     (NSD3) and similar proteins; cd19212"
                     /db_xref="CDD:380989"
     Site            order(1130..1132,1149,1159,1163,1172..1178,1195..1199,
                     1206..1208,1223,1234..1244,1246..1250,1259)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380989"
     Site            order(1130..1132,1172..1175,1195..1199,1236,1243,
                     1247..1250,1259)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380989"
     Site            order(1149,1159,1163,1174..1178,1206..1208,1223,
                     1234..1238)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380989"
     Site            order(1201,1248,1250,1255)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:380989"
     Region          1298..1340
                     /region_name="PHD5_NSD3"
                     /note="PHD finger 5 found in nuclear SET domain-containing
                     protein 3 (NSD3); cd15661"
                     /db_xref="CDD:277131"
     Site            order(1298,1307..1311,1317,1335)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277131"
     Region          1339..1388
                     /region_name="C5HCH"
                     /note="NSD Cys-His rich domain; pfam17982"
                     /db_xref="CDD:465605"
     CDS             1..1412
                     /gene="NSD3"
                     /coded_by="XM_041479601.1:212..4450"
                     /db_xref="GeneID:121360068"
ORIGIN      
        1 mdfsfsfmqg imgntiqqpp qlidsanirq eeafdgssdi aedggrtpye aalqqgfqyp
       61 tptaeelppl tngyppaism yepqakyqty sqypngsang fgtgrnfspp eyyqlensna
      121 rphevvekps ppqppppppp sapqvgipkk tgspeiklki tktiqngrel fesslcgdll
      181 nevqareyak akhegrkekr kksskhdssr seerkshkip klepeeqnvq qlvpslptqv
      241 thdvkfqvgd lvwskvgtyp wwpcmvscdp qldvhtkint rgareyhvqf fsnqperawv
      301 hekrvreyqg hkqyeqllae aakqasnhse kqkirkprpq reraqwdigi ahaekalkmt
      361 reerieqytf iyvdqepeea lakakktaas kseakknrrp kaapssqpeh agvaagsspc
      421 hgerrqgqrr hssleeeeap pvkiawktaa arkslpasit mhnldlqkcn mspvvkieqv
      481 falqnaagdg klidqfvyst kgvgnkteis vkgqekvnss saqrsekavv qnasspetts
      541 gaagsvekkq qrrsirtrse sekstevvpk kkikkeqvea vplaavktgl qkgaseisds
      601 ckplkkrsra stdmeltssa yrdtsdsdsr glndlqgsfg krsdspsata dadasdvqsv
      661 dsslsrrgtg tskkdtvcqi cessgeslla cegeccsmfh leclglkamp eekficteck
      721 ngehtcfsck lpgkdvkrcs vstcgkfyhe acvrkfatal fesrgfrcpq hcctacsmdk
      781 dmhkaskgrm arclrcpvay hsgdgciaag slfvsshili csnhskrths ssavnvgfcf
      841 vcarglvvqd hsdplfssya ykshyllnes nraelmklpm ipppssaskk kcekggkllc
      901 cescpasfhp eclsiempeg cwncndckag kklrykqivw vklgnyrwwp aeicnprsvp
      961 lniqglkhdi gdfpvfffgs hdyywvhqgr vfpyvegdks faegqtsink tfkkaleeaa
     1021 krfqelkaqr eskealeier nsrkpppykh iksnkvigkv qiqvadlsei prcnckpsde
     1081 npcglesecl nrmlqyechp qvcpagercq nqcftkrlyp daeiikterr gwglrtkrsi
     1141 kkgefvneyv gelideeecr lrikrahens vtnfymltvt kdriidagpk gnysrfmnhs
     1201 cnpncetqkw tvngdirvgl falcdipagm eltfnynldc lgngrtechc gaencsgflg
     1261 vrpktafata neekvknakl kqkkrkikte qkqmhedncf qcgdggelvm cdkkdcpkay
     1321 hllclnltqp pfgkwecpwh qcdicsnpav sfcefcphsf ckdhekgalv psaldgrlcc
     1381 sahdpkspva peywskikck leaqnaveea ke
//
LOCUS       XP_041335547             336 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335547
VERSION     XP_041335547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479613.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="phospholipid phosphatase 5 isoform X1"
                     /calculated_mol_wt=36110
     Region          39..>108
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     CDS             1..336
                     /gene="PLPP5"
                     /coded_by="XM_041479613.1:150..1160"
                     /db_xref="GeneID:121360100"
ORIGIN      
        1 mrraelaaea alralllatf gimeflppfq rvvqpeemwl ykkpyveadh vptvfmffia
       61 flsplllill arlfmgadhe dtreaclaas lalalngvft nalklvvgsc kdnsdidktl
      121 gsrclrpslr cwaqagedgv gtgcsllprg cwecphrral sstslsqata rllppllpgr
      181 psqrragvhg graqgdrgpq elpqrarflc lcwscllrll pgreaaqlcs rpggpgpall
      241 clpppplpgh phrrvphlrl qaplgrcvgw lsdglgarlp vlqavlpspd rhyvpqtisg
      301 qaqsaasarg easssrlphe hlvpgsvlpl laarag
//
LOCUS       XP_041335559             314 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335559
VERSION     XP_041335559.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479625.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="phospholipid phosphatase 5 isoform X2"
                     /calculated_mol_wt=33771
     Region          17..>86
                     /region_name="PAP2_like"
                     /note="PAP2_like proteins, a super-family of histidine
                     phosphatases and vanadium haloperoxidases, includes type 2
                     phosphatidic acid phosphatase or lipid phosphate
                     phosphatase (LPP), Glucose-6-phosphatase,
                     Phosphatidylglycerophosphatase B and bacterial acid...;
                     cl00474"
                     /db_xref="CDD:469784"
     CDS             1..314
                     /gene="PLPP5"
                     /coded_by="XM_041479625.1:141..1085"
                     /db_xref="GeneID:121360100"
ORIGIN      
        1 meflppfqrv vqpeemwlyk kpyveadhvp tvfmffiafl splllillar lfmgadhedt
       61 reaclaasla lalngvftna lklvvgsckd nsdidktlgs rclrpslrcw aqagedgvgt
      121 gcsllprgcw ecphrralss tslsqatarl lppllpgrps qrragvhggr aqgdrgpqel
      181 pqrarflclc wscllrllpg reaaqlcsrp ggpgpallcl pppplpghph rrvphlrlqa
      241 plgrcvgwls dglgarlpvl qavlpspdrh yvpqtisgqa qsaasargea sssrlphehl
      301 vpgsvlplla arag
//
LOCUS       XP_041335566             263 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041335566
VERSION     XP_041335566.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479632.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..263
                     /product="phospholipid phosphatase 5 isoform X3"
                     /calculated_mol_wt=29113
     Region          39..227
                     /region_name="PAP2_containing_1_like"
                     /note="PAP2, subfamily similar to human
                     phosphatidic_acid_phosphatase_type_2_domain_containing_1.
                     Most likely membrane-associated phosphatidic acid
                     phosphatases. Plant members of this group are
                     constitutively expressed in many tissues and exhibit
                     both...; cd03390"
                     /db_xref="CDD:239484"
     Site            order(104,111,146..148,198,204,208)
                     /site_type="active"
                     /db_xref="CDD:239484"
     CDS             1..263
                     /gene="PLPP5"
                     /coded_by="XM_041479632.1:150..941"
                     /db_xref="GeneID:121360100"
ORIGIN      
        1 mrraelaaea alralllatf gimeflppfq rvvqpeemwl ykkpyveadh vptvfmffia
       61 flsplllill arlfmgadhe dtreaclaas lalalngvft nalklvvgrp rpdffhrcfp
      121 dgranaelvc tgdarrvteg rksfpsghas fafaglafsa fylagklhsf vpgrggralr
      181 fcafllplfl atligvsrtc dykhhwedvl vgsvmglvla ylcyrqyypp ltdttchkps
      241 lakpkalpah eekppapgfh mni
//
LOCUS       XP_041335579             432 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-3 adrenergic receptor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335579
VERSION     XP_041335579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="beta-3 adrenergic receptor isoform X1"
                     /calculated_mol_wt=47010
     Region          28..328
                     /region_name="7tmA_Beta3_AR"
                     /note="beta-3 adrenergic receptors (adrenoceptors), member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15959"
                     /db_xref="CDD:320625"
     Region          29..55
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320625"
     Site            order(56..57,125,128..130,132..137,217,220..221,223..225,
                     227..228,262..263,266..267)
                     /site_type="other"
                     /note="putative G protein interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:320625"
     Region          62..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320625"
     Region          100..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320625"
     Site            order(103..104,107..108,111,187..188,190,194..195,
                     198..199,202,278,281..282,285,300,304,308)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320625"
     Region          144..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320625"
     Region          191..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320625"
     Region          258..288
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320625"
     Region          297..322
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320625"
     CDS             1..432
                     /gene="ADRB3"
                     /coded_by="XM_041479645.1:63..1361"
                     /db_xref="GeneID:121360118"
ORIGIN      
        1 msplpagngs awggsgncsg tgslgrqwvl gtaisltvlv tvagnllviv aiaktprlqt
       61 mtnvfitsla cadlimgllv vppgatills ghwpygttvc elwtsldvlc vtasietlca
      121 iavdrylait splqyealvt kgraravvcl vwaisafisf lpimnhwwrd gaderaarcy
      181 ddprccdfvt nvtyaiisst isfyvpllvm ifvyvrvfav atrhvqligk ekvrflqepp
      241 spagrssrrr rpsrllaike hkalktlgii mgvftlcwlp ffvaniikvf crslvpdqlf
      301 lflnwlgyin safnpiiycr spdfrsafrk llccprradr rlhavsqdlq rcpcafsprg
      361 dpardskaap grpgedgear gsgsraeetp lppgsghwqr plgesrlqga qtslcsqlhe
      421 faggetpagp sd
//
LOCUS       XP_041335588             420 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-3 adrenergic receptor isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335588
VERSION     XP_041335588.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479654.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="beta-3 adrenergic receptor isoform X2"
                     /calculated_mol_wt=45923
     Region          28..328
                     /region_name="7tmA_Beta3_AR"
                     /note="beta-3 adrenergic receptors (adrenoceptors), member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15959"
                     /db_xref="CDD:320625"
     Region          29..55
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320625"
     Site            order(56..57,125,128..130,132..137,217,220..221,223..225,
                     227..228,262..263,266..267)
                     /site_type="other"
                     /note="putative G protein interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:320625"
     Region          62..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320625"
     Region          100..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320625"
     Site            order(103..104,107..108,111,187..188,190,194..195,
                     198..199,202,278,281..282,285,300,304,308)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320625"
     Region          144..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320625"
     Region          191..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320625"
     Region          258..288
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320625"
     Region          297..322
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320625"
     CDS             1..420
                     /gene="ADRB3"
                     /coded_by="XM_041479654.1:64..1326"
                     /db_xref="GeneID:121360118"
ORIGIN      
        1 msplpagngs awggsgncsg tgslgrqwvl gtaisltvlv tvagnllviv aiaktprlqt
       61 mtnvfitsla cadlimgllv vppgatills ghwpygttvc elwtsldvlc vtasietlca
      121 iavdrylait splqyealvt kgraravvcl vwaisafisf lpimnhwwrd gaderaarcy
      181 ddprccdfvt nvtyaiisst isfyvpllvm ifvyvrvfav atrhvqligk ekvrflqepp
      241 spagrssrrr rpsrllaike hkalktlgii mgvftlcwlp ffvaniikvf crslvpdqlf
      301 lflnwlgyin safnpiiycr spdfrsafrk llccprradr rlhavsqdlq rcpcafsprg
      361 dpardskaap grpgedgear gsgsraeetp lppgsghwqr plgesrlqga qtslcsqlhe
//
LOCUS       XP_041335600             945 aa            linear   VRT 06-MAY-2021
DEFINITION  netrin receptor UNC5D [Pyrgilauda ruficollis].
ACCESSION   XP_041335600
VERSION     XP_041335600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479666.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509544.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..945
                     /product="netrin receptor UNC5D"
                     /calculated_mol_wt=104228
     Region          156..242
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          169..173
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          183..187
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          207..211
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          221..226
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          235..238
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          248..299
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          304..352
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          537..632
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     Region          680..819
                     /region_name="UPA"
                     /note="UPA domain; pfam17217"
                     /db_xref="CDD:465384"
     Region          846..926
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..945
                     /gene="UNC5D"
                     /coded_by="XM_041479666.1:1..2838"
                     /db_xref="GeneID:121360137"
ORIGIN      
        1 mgggaprrhr rllllllglc swtaalrgne nsealpesip sapgtlphfl eepddsyiik
       61 snpivlrcra vpamqiffkc ngewvhqneh vshesldeat glkvrevsin vtrqqvedfh
      121 gpedywcqcv awshlgtsks rkasvriayl rknfeqdpqg kevpiegmiv lhcrppegvp
      181 aaevewlkne epidsnlden idtradhnli irqarlsdsg nytcmaaniv akrrslsatv
      241 vvyvnggwss wtewsscnar cgrgwqkrsr tctnpaplng gafcegmsvq kitctslcpv
      301 dgswevwsew svcspecehl rvrecaapap rnggkhcegl sqesencteg lciqdkkpph
      361 eikpqnverg gdvalysgla aavlavavla lgvtlyrrsq seygvdvids saltggfqtf
      421 nfktvrqgns lllnsslqpe ltvsrtysgp iclqdpldke lmtesslfnp ladikvkvqs
      481 sfmvslgvte raeyhskahp gtfphgsprp fgsiqarnka mfiqnlasis ssselrstal
      541 fghlggrlvv pntgvsllip hgaipeessw eiylaitqke sslepegpev llgpevscgp
      601 pelavstpca lsiphcahad pqhwsihlkr rtqqgkweev msveeettsc yclldpyach
      661 illnsfgtya ligepisdca vrqlkvavfg clscnsldyn lrvycvdntp cafqevvsde
      721 rlqggqllee pkllhfkgnt cslqisvldv ppflwrikpf tacqevpfsr vwrgsprpll
      781 gafslerfsp attqlcctvc vrqlqgheql lhvqtsilea erenipffgh edsafpaqlg
      841 pkafkiprsi rqricatfda psakgkdwqm laqknsisrn lsffatqssp savildlwea
      901 rhqhdgdlds lacaleeigr thsklsevae peleepefpc srkgl
//
LOCUS       XP_041335612             228 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041335612
VERSION     XP_041335612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479678.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509545.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="integrator complex subunit 5-like"
                     /calculated_mol_wt=24443
     Region          1..>211
                     /region_name="INTS5_C"
                     /note="Integrator complex subunit 5 C-terminus; pfam14838"
                     /db_xref="CDD:464342"
     CDS             1..228
                     /gene="LOC121360145"
                     /coded_by="XM_041479678.1:121..807"
                     /db_xref="GeneID:121360145"
ORIGIN      
        1 mfheslgspr ehhkatvpfl lqlalmspal laavspelvd slkppvlnql hqhfsavprd
       61 elegvvgvvv hllchtsaga lrtlrfllat aapasvitap gpalhegvre acerllqlll
      121 lhlqklvhgr gsaslaecpa rpvpflealr phvrelcqdt lrlerrrclw qhqllallav
      181 hsaphgaaea lffllalart peelalapql vwrssggpgg vfggpegp
//
LOCUS       XP_041335620              94 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerase II subunit RPB7, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335620
VERSION     XP_041335620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509545.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>94
                     /product="DNA-directed RNA polymerase II subunit RPB7"
     Region          2..81
                     /region_name="RNAP_II_Rpb7_N"
                     /note="Rpb7, N-terminal ribonucleoprotein (RNP) domain.
                     Rpb7 is a subunit of eukaryotic RNA polymerase (RNAP) II
                     that is homologous to Rpc25 of RNAP III, RpoE of archaeal
                     RNAP, and Rpa43 of eukaryotic RNAP I. Rpb7 heterodimerizes
                     with Rpb4 and this heterodimer...; cd04329"
                     /db_xref="CDD:239821"
     Site            order(2..3,5,8,35..36,42,46,48,71,73,75,78,80..81)
                     /site_type="other"
                     /note="Rpb4 interaction site [polypeptide binding]"
                     /db_xref="CDD:239821"
     Site            order(16,18,56,63..64)
                     /site_type="other"
                     /note="Rpb6 interaction site [polypeptide binding]"
                     /db_xref="CDD:239821"
     Site            order(18..20,22..23,57..59,66)
                     /site_type="other"
                     /note="Rpb1 interaction site [polypeptide binding]"
                     /db_xref="CDD:239821"
     Region          81..>94
                     /region_name="S1_like"
                     /note="Ribosomal protein S1-like RNA-binding domain. Found
                     in a wide variety of RNA-associated proteins. Originally
                     identified in S1 ribosomal protein. This superfamily also
                     contains the Cold Shock Domain (CSD), which is a homolog
                     of the S1 domain. Both domains...; cl09927"
                     /db_xref="CDD:471952"
     CDS             1..94
                     /gene="POLR2G"
                     /coded_by="XM_041479686.1:133..>414"
                     /db_xref="GeneID:121360155"
ORIGIN      
        1 mfyhislehe illhpryfgp nllntvkqkl ftevegtctg kygfviavtt idnigagviq
       61 pgrgfvlypv rykaivfrpf kgevvdavvt qvnk
//
LOCUS       XP_041335631             262 aa            linear   VRT 06-MAY-2021
DEFINITION  cell adhesion molecule 4-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041335631
VERSION     XP_041335631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479697.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509556.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>262
                     /product="cell adhesion molecule 4-like"
     Region          70..168
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          89..93
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          103..107
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          130..134
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..149
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          161..164
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..262
                     /gene="LOC121360163"
                     /coded_by="XM_041479697.1:<1..>787"
                     /codon_start=3
                     /db_xref="GeneID:121360163"
ORIGIN      
        1 lkderfelgv tmgalkderf elglwgdhwv tvgglcdpwv talkderfel glrgdplkde
       61 rfelgvtmgv ppepplveag alavegeele ltclvprarp patlrwfrdr relpgrsslr
      121 qdgkvfwqrs vlrlrperrd hgaivtceat npalgrgqrr ltqyqldvqc eplgytglyw
      181 gglgkdpgav vaaqgagpfa vvggalallv fllllllgal vwcsvrqkgg rgfpggawpp
      241 egaglyttgg ataggawfav wg
//
LOCUS       XP_041335647             178 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcoplasmic/endoplasmic reticulum calcium ATPase 1-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335647
VERSION     XP_041335647.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479713.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509578.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="sarcoplasmic/endoplasmic reticulum calcium
                     ATPase 1-like"
                     /calculated_mol_wt=20040
     Region          <1..173
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     CDS             1..178
                     /gene="LOC121360167"
                     /coded_by="XM_041479713.1:38..574"
                     /db_xref="GeneID:121360167"
ORIGIN      
        1 mdkpprspke plisgwlffr ylaiggyvga atvgaaawwf lfaedgpnvt yhqlthfmqc
       61 sehnvefegl dcdifespvp mtmalsvlvt iemcnalnsl senqslarmp pwvniwlmgs
      121 iclsmslhfv ilyidplpmi fkltplslth wlmvikisfp villdealkf iarnylea
//
LOCUS       XP_041335663             397 aa            linear   VRT 06-MAY-2021
DEFINITION  sporozoite surface protein 2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041335663
VERSION     XP_041335663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479729.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509611.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>397
                     /product="sporozoite surface protein 2-like"
     Region          5..>150
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          6..30
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          81..103
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          126..142
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          <176..>237
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     Region          <289..>381
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     CDS             1..397
                     /gene="LOC121360168"
                     /coded_by="XM_041479729.1:97..>1287"
                     /db_xref="GeneID:121360168"
ORIGIN      
        1 mssalvlavy iltftvgfpa niftlavlaa ksrrrpsalt taelfllnlt aadlllllfl
       61 pfkmaeaaag mawplpaalc pvanfcfyss mylsslflaa lsvrrylgva fplrlqgrrr
      121 pgrvlalsaa iwllacghcs ivfvaeftrd pqgggangsq gggggrfggl dggdtvadav
      181 dpetfnpvdp ktnsvdpvdp ktfnpvdpma npidpidpkt npvdpielkt fnpidpmana
      241 idpktfnpid pkanplylid pktfnaidpm anaidlktfn pvnpidpktn pidlidpktf
      301 npvdpmanpi epkrfnpvdp ktfktidpma npvdpidlkt fnlvdpmanp ldpktsnpid
      361 pktpnpkspk tpnpidpkag relnreaetn ekrvkag
//
LOCUS       XP_041335679             212 aa            linear   VRT 06-MAY-2021
DEFINITION  maestro heat-like repeat-containing protein family member 1,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041335679
VERSION     XP_041335679.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479745.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509633.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>212
                     /product="maestro heat-like repeat-containing protein
                     family member 1"
     Region          88..>184
                     /region_name="API5"
                     /note="Apoptosis inhibitory protein 5 (API5); pfam05918"
                     /db_xref="CDD:428672"
     CDS             1..212
                     /gene="LOC121360170"
                     /coded_by="XM_041479745.1:109..>744"
                     /db_xref="GeneID:121360170"
ORIGIN      
        1 mlaragnddv vqdvgsaggw elmeiperhh dgiallaram arlcgprlpp ivrslipalg
       61 saldcqrvts saflaellnh nvvndlvlle pildaltale kdscllvrvl alrglgnvas
      121 gspekirrhg sqllasmvng mddkddpnnl laleamssls kildhleerd vqsmllhiai
      181 rirpffdsvr sqpgipgglh ygefingvck fl
//
LOCUS       XP_041335692             180 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein D1, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041335692
VERSION     XP_041335692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509646.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>180
                     /product="forkhead box protein D1"
     Region          11..109
                     /region_name="FH_FOX"
                     /note="Forkhead (FH) domain found in Forkhead box (FOX)
                     family of transcription factors and similar proteins;
                     cl00061"
                     /db_xref="CDD:469596"
     Site            order(16,34..35,38,57..58,60..61,64,71,81..83,85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410820"
     CDS             1..180
                     /gene="LOC121360176"
                     /coded_by="XM_041479758.1:<1..>540"
                     /db_xref="GeneID:121360176"
ORIGIN      
        1 gsgggknslv kppysyiali tmailqspkk rltlseicef isgrfpyyre kfpawqnsir
       61 hnlslndcfv kiprepgnpg kgnywtldpe sadmfdngsf lrrrkrfkrq qlpapelllr
      121 avdpaaflpq pppqppqqpp caygpygcgy glqlqpyhph salfafhhhs ppprqppaap
//
LOCUS       XP_041335707            3499 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat and FYVE domain-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335707
VERSION     XP_041335707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3499
                     /product="WD repeat and FYVE domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=392410
     Region          2506..2629
                     /region_name="PH_BEACH"
                     /note="Pleckstrin homology domain in BEACH domain
                     containing proteins; cd01201"
                     /db_xref="CDD:275391"
     Region          2668..2948
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          <3038..3219
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          3056..3097
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3103..3139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3144..3181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3188..3223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3423..3487
                     /region_name="FYVE_WDFY3"
                     /note="FYVE domain found in WD40 repeat and FYVE
                     domain-containing protein 3 (WDFY3) and similar proteins;
                     cd15719"
                     /db_xref="CDD:277259"
     Site            order(3425,3428,3446..3451,3453..3454,3478..3480)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277259"
     CDS             1..3499
                     /gene="WDFY3"
                     /coded_by="XM_041479773.1:513..11012"
                     /db_xref="GeneID:121360180"
ORIGIN      
        1 mnmvkrimgr prqeecspqd nalglmhlrr lftelchppr hmtqkeqeek lymmlpvfnr
       61 vfgnappstm tekfsdllqf ttqvsrlmvt eirrrasnks teaasraivq flevnqseea
      121 srgwmlltti nllassgqkt vdcmttmsvp stlvkclylf fdlphvpevv ggaqnelpla
      181 errallqkvf vqilvklcsf vspaeelaqk ddlqllfsai tswcppynlp wrksagevlm
      241 tisrhglsvn vvkyihekec lstcvqnmqq sddlspleiv emfaglscfl kdssdvsqtl
      301 lddfriwqgy nflcdlllrl eqakeaeskd alkdlvnlit slttygvnel kpagvttgvp
      361 fllpgfavpq pagkghsvrn iqafsvlqna flraktnyla qiildaiani ymadnanyfi
      421 lesqhtlsqf aekipklpev qtkyfemlel vvfslnyipc kelisvsill ksstsfqcsi
      481 iamrtllkft rhdyifkdvf revgllevmv nllhkyaall kdptqalndq vdsrnssfed
      541 qkqlallvme tltvllqgsn tnagifrefg garcvhnivk ypqcrqhalm iiqqlvlsps
      601 geddmgtllg lmhsapptel qlktdilral llvlreshrt rtvfrkvggf vyvtsllvam
      661 erslcsppkn gwekvnqnqv fellhtvfct ltaamryepa nshffkteiq yekladavrl
      721 lgcfsdlrki splnvfpsnt qlfqrllddd lisldsvspt lrhcsklfiy lykvatdsfd
      781 rhayhsvstp pvcpqkniad vklqtgptsi qsfdaviihp gamlamldll asvgsathpe
      841 haldlqlava nilqslvhte rnqqvmceag lharllqrcs aaladedhsl hpplqrmfer
      901 lasqalqpmv lreflrlgnp lncgawdkkl lkqyrvhkps slsfepemrn smvtsmeglg
      961 pdsvfgvhed shyrisrsll kpaegstvpl trvkclvsmt tphdirlhgs svtpafiefd
     1021 tslegfgclf lpslaphnap tnnavttglv dgavvsgigt gerffpppsg lsystwfcie
     1081 hfstppnnhp vrlltvvrra nsseqhyvcl aivlsakdrs livstkeell qnyvddfsee
     1141 ssfyeilpcc arfrcgdliv egqwhhlvlv mskgmlknst avlyldgqlv ntvklhyihs
     1201 spsgsgsanp pvvstvyayi gtppaqrqls slvwrlgpth fleevlpapg vstiyelgpn
     1261 yvgsfqavyv pckdsksegi npspvslvpe ekvsfglyal svssftvaki rkvynkldsk
     1321 aiakqlaiss henatpvkll hnsaghlngp arsigaalig ylgvrtfvpk pvattlqyig
     1381 gaaailglva masdveglya avkalvcvvk snplaskeme rikgyqllam llkkkrslln
     1441 shilhltfsl vgtvdsghet siipnsaafq dllcdfevwl hapyelhlsl fehfiellte
     1501 sseaaknakl mrefqliprl lltlrdmsls qptiaaisnv lsfllqgfps sydllrfgqf
     1561 isstlptfav cekfvvmevn neekldsgae ddfgglvsan lillrnrlld illkllytsk
     1621 ekttvnlqac eelvktlgfd wimmfmeehl hsttvtaamr ilvvllsnqs iltkfkegls
     1681 gggwldqtds vltnkigtvl gfnvgrsagg rstvreinrd achfpgfpvl qsllpkhtnv
     1741 palyfllmal flqqpvtelp enlqvsapvi ssqcnqgakf dldsiwtfif gvpascgtvt
     1801 ssihsvctea aflllgmlrs mlnspwqsee egswlreypv tlmqffryly hnvpdlislw
     1861 ispeflcala atvfpfntrp ysemvtdldd evgspaeefk afaadsgmnr sqseycnvgt
     1921 ktyltnhpak kfvfdfmrvm iidnlcltpa skqtplvdll leasperstr tqqkefqtyv
     1981 ldgvmdhlla advllgedas lpitsggsyq vlvnnvfyft qrvvdklwqg mfnkeskllv
     2041 dfiiqliaqs krrsqglsld aiyhclnrti lyqfsrahkt vpqqvallds lrvltvnrnl
     2101 ilgpgnhdqe fisclahcli nlhvgsnvdg fgleaearmt twhimipsdi epdgvysqdv
     2161 segrqlllka inrvwtelih skkqvleevf kvtlpvndrg qvditvarpf ieeaslkcwq
     2221 nhlahekkci srgealvpat qsklsrvssg fglskltgsr rnrkesglsk hnlstqeisq
     2281 wmfthiavvr dlvdmqykey qerqqnalky vteewsqiey ellrerglwg ppigshldkw
     2341 mlemtegpcr mrkkmvrndm fytqypympe aeqetsllsd fsnrlpetsd dtipqkkpar
     2401 yrraisydsk eyymrlasgn pavfqdtiee ntvgetaqqe pehgedtiar vkglvkpplk
     2461 rsrsapdggd desqdqsqdq iiegssided ektdnttllr lleegekiqh myrcarvqgl
     2521 dtseglllfg kehfyvidgf tmtatreird ietlppkmhe piiprgarqg psqlkrtcsi
     2581 fayedikevh krryllqpia ievfsgdgrn yllafqkgvr nkvyqrflav vpsltdsses
     2641 vsgqrpntsv eqgsgllstl vgeksvtqrw ergeisnfqy lmhlntlagr syndlmqypv
     2701 fpwiladyds eeldltnpkt frnlakpmga qtedrlaqyk krykdwedpn getpayhygt
     2761 hyssamivas ylvrmepftq iflrlqgghf dladrmfhsv reawysaskh nmadvkelip
     2821 effylpefll nsnnfdlgck qngtklgdvi lppwakgdpr efirvhreal ecdfvsahlh
     2881 ewidlifgyk qqgpaaveav nvfhhlfyeg qvdiynindp lketatigfi nnfgqipkql
     2941 fkkphppkrv rsrlngeavg tsvppsstgd kiffhhldnl rpslapvkel kepvgqivct
     3001 dkgilaveqn kvlipptwnk tfawgyadls crlgtyesdk avivyeclse wgqilcaicp
     3061 npklvitggt stavcvwemg vskekakalt lkqallghtd tvtcltasla yhiivsgsrd
     3121 rtciiwdlnk lsfltqlrgh rapisalcin eltgdivsca gtyihvwsin gsptasvntf
     3181 tgrsqqimcc fvsemnewdt qnvivtghsd gvvrfwrmef lqvpetpape pvemlemqed
     3241 cqdaqigqea heedssdsea ddacigqdtk vqenqsqpss tshrprsssa raaaawsads
     3301 gsddsrrwsd qlsldekdgf ifvnysegqa kmhphaqvnh phpsyaearh ysklkpgyrw
     3361 erqlvfrskl tmhtafdrkd nahpaeital giskdhsril igdgrgrvfs wsvsdqpgrs
     3421 aadhwvkdeg gdscsgctvr fslterrhhc rncgqlfcqk csrfqseikr lkisspvrvc
     3481 qncfynlqhe rgseegprn
//
LOCUS       XP_041335716            3499 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat and FYVE domain-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335716
VERSION     XP_041335716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3499
                     /product="WD repeat and FYVE domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=392410
     Region          2506..2629
                     /region_name="PH_BEACH"
                     /note="Pleckstrin homology domain in BEACH domain
                     containing proteins; cd01201"
                     /db_xref="CDD:275391"
     Region          2668..2948
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          <3038..3219
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          3056..3097
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3103..3139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3144..3181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3188..3223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3423..3487
                     /region_name="FYVE_WDFY3"
                     /note="FYVE domain found in WD40 repeat and FYVE
                     domain-containing protein 3 (WDFY3) and similar proteins;
                     cd15719"
                     /db_xref="CDD:277259"
     Site            order(3425,3428,3446..3451,3453..3454,3478..3480)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277259"
     CDS             1..3499
                     /gene="WDFY3"
                     /coded_by="XM_041479782.1:418..10917"
                     /db_xref="GeneID:121360180"
ORIGIN      
        1 mnmvkrimgr prqeecspqd nalglmhlrr lftelchppr hmtqkeqeek lymmlpvfnr
       61 vfgnappstm tekfsdllqf ttqvsrlmvt eirrrasnks teaasraivq flevnqseea
      121 srgwmlltti nllassgqkt vdcmttmsvp stlvkclylf fdlphvpevv ggaqnelpla
      181 errallqkvf vqilvklcsf vspaeelaqk ddlqllfsai tswcppynlp wrksagevlm
      241 tisrhglsvn vvkyihekec lstcvqnmqq sddlspleiv emfaglscfl kdssdvsqtl
      301 lddfriwqgy nflcdlllrl eqakeaeskd alkdlvnlit slttygvnel kpagvttgvp
      361 fllpgfavpq pagkghsvrn iqafsvlqna flraktnyla qiildaiani ymadnanyfi
      421 lesqhtlsqf aekipklpev qtkyfemlel vvfslnyipc kelisvsill ksstsfqcsi
      481 iamrtllkft rhdyifkdvf revgllevmv nllhkyaall kdptqalndq vdsrnssfed
      541 qkqlallvme tltvllqgsn tnagifrefg garcvhnivk ypqcrqhalm iiqqlvlsps
      601 geddmgtllg lmhsapptel qlktdilral llvlreshrt rtvfrkvggf vyvtsllvam
      661 erslcsppkn gwekvnqnqv fellhtvfct ltaamryepa nshffkteiq yekladavrl
      721 lgcfsdlrki splnvfpsnt qlfqrllddd lisldsvspt lrhcsklfiy lykvatdsfd
      781 rhayhsvstp pvcpqkniad vklqtgptsi qsfdaviihp gamlamldll asvgsathpe
      841 haldlqlava nilqslvhte rnqqvmceag lharllqrcs aaladedhsl hpplqrmfer
      901 lasqalqpmv lreflrlgnp lncgawdkkl lkqyrvhkps slsfepemrn smvtsmeglg
      961 pdsvfgvhed shyrisrsll kpaegstvpl trvkclvsmt tphdirlhgs svtpafiefd
     1021 tslegfgclf lpslaphnap tnnavttglv dgavvsgigt gerffpppsg lsystwfcie
     1081 hfstppnnhp vrlltvvrra nsseqhyvcl aivlsakdrs livstkeell qnyvddfsee
     1141 ssfyeilpcc arfrcgdliv egqwhhlvlv mskgmlknst avlyldgqlv ntvklhyihs
     1201 spsgsgsanp pvvstvyayi gtppaqrqls slvwrlgpth fleevlpapg vstiyelgpn
     1261 yvgsfqavyv pckdsksegi npspvslvpe ekvsfglyal svssftvaki rkvynkldsk
     1321 aiakqlaiss henatpvkll hnsaghlngp arsigaalig ylgvrtfvpk pvattlqyig
     1381 gaaailglva masdveglya avkalvcvvk snplaskeme rikgyqllam llkkkrslln
     1441 shilhltfsl vgtvdsghet siipnsaafq dllcdfevwl hapyelhlsl fehfiellte
     1501 sseaaknakl mrefqliprl lltlrdmsls qptiaaisnv lsfllqgfps sydllrfgqf
     1561 isstlptfav cekfvvmevn neekldsgae ddfgglvsan lillrnrlld illkllytsk
     1621 ekttvnlqac eelvktlgfd wimmfmeehl hsttvtaamr ilvvllsnqs iltkfkegls
     1681 gggwldqtds vltnkigtvl gfnvgrsagg rstvreinrd achfpgfpvl qsllpkhtnv
     1741 palyfllmal flqqpvtelp enlqvsapvi ssqcnqgakf dldsiwtfif gvpascgtvt
     1801 ssihsvctea aflllgmlrs mlnspwqsee egswlreypv tlmqffryly hnvpdlislw
     1861 ispeflcala atvfpfntrp ysemvtdldd evgspaeefk afaadsgmnr sqseycnvgt
     1921 ktyltnhpak kfvfdfmrvm iidnlcltpa skqtplvdll leasperstr tqqkefqtyv
     1981 ldgvmdhlla advllgedas lpitsggsyq vlvnnvfyft qrvvdklwqg mfnkeskllv
     2041 dfiiqliaqs krrsqglsld aiyhclnrti lyqfsrahkt vpqqvallds lrvltvnrnl
     2101 ilgpgnhdqe fisclahcli nlhvgsnvdg fgleaearmt twhimipsdi epdgvysqdv
     2161 segrqlllka inrvwtelih skkqvleevf kvtlpvndrg qvditvarpf ieeaslkcwq
     2221 nhlahekkci srgealvpat qsklsrvssg fglskltgsr rnrkesglsk hnlstqeisq
     2281 wmfthiavvr dlvdmqykey qerqqnalky vteewsqiey ellrerglwg ppigshldkw
     2341 mlemtegpcr mrkkmvrndm fytqypympe aeqetsllsd fsnrlpetsd dtipqkkpar
     2401 yrraisydsk eyymrlasgn pavfqdtiee ntvgetaqqe pehgedtiar vkglvkpplk
     2461 rsrsapdggd desqdqsqdq iiegssided ektdnttllr lleegekiqh myrcarvqgl
     2521 dtseglllfg kehfyvidgf tmtatreird ietlppkmhe piiprgarqg psqlkrtcsi
     2581 fayedikevh krryllqpia ievfsgdgrn yllafqkgvr nkvyqrflav vpsltdsses
     2641 vsgqrpntsv eqgsgllstl vgeksvtqrw ergeisnfqy lmhlntlagr syndlmqypv
     2701 fpwiladyds eeldltnpkt frnlakpmga qtedrlaqyk krykdwedpn getpayhygt
     2761 hyssamivas ylvrmepftq iflrlqgghf dladrmfhsv reawysaskh nmadvkelip
     2821 effylpefll nsnnfdlgck qngtklgdvi lppwakgdpr efirvhreal ecdfvsahlh
     2881 ewidlifgyk qqgpaaveav nvfhhlfyeg qvdiynindp lketatigfi nnfgqipkql
     2941 fkkphppkrv rsrlngeavg tsvppsstgd kiffhhldnl rpslapvkel kepvgqivct
     3001 dkgilaveqn kvlipptwnk tfawgyadls crlgtyesdk avivyeclse wgqilcaicp
     3061 npklvitggt stavcvwemg vskekakalt lkqallghtd tvtcltasla yhiivsgsrd
     3121 rtciiwdlnk lsfltqlrgh rapisalcin eltgdivsca gtyihvwsin gsptasvntf
     3181 tgrsqqimcc fvsemnewdt qnvivtghsd gvvrfwrmef lqvpetpape pvemlemqed
     3241 cqdaqigqea heedssdsea ddacigqdtk vqenqsqpss tshrprsssa raaaawsads
     3301 gsddsrrwsd qlsldekdgf ifvnysegqa kmhphaqvnh phpsyaearh ysklkpgyrw
     3361 erqlvfrskl tmhtafdrkd nahpaeital giskdhsril igdgrgrvfs wsvsdqpgrs
     3421 aadhwvkdeg gdscsgctvr fslterrhhc rncgqlfcqk csrfqseikr lkisspvrvc
     3481 qncfynlqhe rgseegprn
//
LOCUS       XP_041335727            3499 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat and FYVE domain-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335727
VERSION     XP_041335727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3499
                     /product="WD repeat and FYVE domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=392410
     Region          2506..2629
                     /region_name="PH_BEACH"
                     /note="Pleckstrin homology domain in BEACH domain
                     containing proteins; cd01201"
                     /db_xref="CDD:275391"
     Region          2668..2948
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          <3038..3219
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          3056..3097
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3103..3139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3144..3181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3188..3223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3423..3487
                     /region_name="FYVE_WDFY3"
                     /note="FYVE domain found in WD40 repeat and FYVE
                     domain-containing protein 3 (WDFY3) and similar proteins;
                     cd15719"
                     /db_xref="CDD:277259"
     Site            order(3425,3428,3446..3451,3453..3454,3478..3480)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277259"
     CDS             1..3499
                     /gene="WDFY3"
                     /coded_by="XM_041479793.1:483..10982"
                     /db_xref="GeneID:121360180"
ORIGIN      
        1 mnmvkrimgr prqeecspqd nalglmhlrr lftelchppr hmtqkeqeek lymmlpvfnr
       61 vfgnappstm tekfsdllqf ttqvsrlmvt eirrrasnks teaasraivq flevnqseea
      121 srgwmlltti nllassgqkt vdcmttmsvp stlvkclylf fdlphvpevv ggaqnelpla
      181 errallqkvf vqilvklcsf vspaeelaqk ddlqllfsai tswcppynlp wrksagevlm
      241 tisrhglsvn vvkyihekec lstcvqnmqq sddlspleiv emfaglscfl kdssdvsqtl
      301 lddfriwqgy nflcdlllrl eqakeaeskd alkdlvnlit slttygvnel kpagvttgvp
      361 fllpgfavpq pagkghsvrn iqafsvlqna flraktnyla qiildaiani ymadnanyfi
      421 lesqhtlsqf aekipklpev qtkyfemlel vvfslnyipc kelisvsill ksstsfqcsi
      481 iamrtllkft rhdyifkdvf revgllevmv nllhkyaall kdptqalndq vdsrnssfed
      541 qkqlallvme tltvllqgsn tnagifrefg garcvhnivk ypqcrqhalm iiqqlvlsps
      601 geddmgtllg lmhsapptel qlktdilral llvlreshrt rtvfrkvggf vyvtsllvam
      661 erslcsppkn gwekvnqnqv fellhtvfct ltaamryepa nshffkteiq yekladavrl
      721 lgcfsdlrki splnvfpsnt qlfqrllddd lisldsvspt lrhcsklfiy lykvatdsfd
      781 rhayhsvstp pvcpqkniad vklqtgptsi qsfdaviihp gamlamldll asvgsathpe
      841 haldlqlava nilqslvhte rnqqvmceag lharllqrcs aaladedhsl hpplqrmfer
      901 lasqalqpmv lreflrlgnp lncgawdkkl lkqyrvhkps slsfepemrn smvtsmeglg
      961 pdsvfgvhed shyrisrsll kpaegstvpl trvkclvsmt tphdirlhgs svtpafiefd
     1021 tslegfgclf lpslaphnap tnnavttglv dgavvsgigt gerffpppsg lsystwfcie
     1081 hfstppnnhp vrlltvvrra nsseqhyvcl aivlsakdrs livstkeell qnyvddfsee
     1141 ssfyeilpcc arfrcgdliv egqwhhlvlv mskgmlknst avlyldgqlv ntvklhyihs
     1201 spsgsgsanp pvvstvyayi gtppaqrqls slvwrlgpth fleevlpapg vstiyelgpn
     1261 yvgsfqavyv pckdsksegi npspvslvpe ekvsfglyal svssftvaki rkvynkldsk
     1321 aiakqlaiss henatpvkll hnsaghlngp arsigaalig ylgvrtfvpk pvattlqyig
     1381 gaaailglva masdveglya avkalvcvvk snplaskeme rikgyqllam llkkkrslln
     1441 shilhltfsl vgtvdsghet siipnsaafq dllcdfevwl hapyelhlsl fehfiellte
     1501 sseaaknakl mrefqliprl lltlrdmsls qptiaaisnv lsfllqgfps sydllrfgqf
     1561 isstlptfav cekfvvmevn neekldsgae ddfgglvsan lillrnrlld illkllytsk
     1621 ekttvnlqac eelvktlgfd wimmfmeehl hsttvtaamr ilvvllsnqs iltkfkegls
     1681 gggwldqtds vltnkigtvl gfnvgrsagg rstvreinrd achfpgfpvl qsllpkhtnv
     1741 palyfllmal flqqpvtelp enlqvsapvi ssqcnqgakf dldsiwtfif gvpascgtvt
     1801 ssihsvctea aflllgmlrs mlnspwqsee egswlreypv tlmqffryly hnvpdlislw
     1861 ispeflcala atvfpfntrp ysemvtdldd evgspaeefk afaadsgmnr sqseycnvgt
     1921 ktyltnhpak kfvfdfmrvm iidnlcltpa skqtplvdll leasperstr tqqkefqtyv
     1981 ldgvmdhlla advllgedas lpitsggsyq vlvnnvfyft qrvvdklwqg mfnkeskllv
     2041 dfiiqliaqs krrsqglsld aiyhclnrti lyqfsrahkt vpqqvallds lrvltvnrnl
     2101 ilgpgnhdqe fisclahcli nlhvgsnvdg fgleaearmt twhimipsdi epdgvysqdv
     2161 segrqlllka inrvwtelih skkqvleevf kvtlpvndrg qvditvarpf ieeaslkcwq
     2221 nhlahekkci srgealvpat qsklsrvssg fglskltgsr rnrkesglsk hnlstqeisq
     2281 wmfthiavvr dlvdmqykey qerqqnalky vteewsqiey ellrerglwg ppigshldkw
     2341 mlemtegpcr mrkkmvrndm fytqypympe aeqetsllsd fsnrlpetsd dtipqkkpar
     2401 yrraisydsk eyymrlasgn pavfqdtiee ntvgetaqqe pehgedtiar vkglvkpplk
     2461 rsrsapdggd desqdqsqdq iiegssided ektdnttllr lleegekiqh myrcarvqgl
     2521 dtseglllfg kehfyvidgf tmtatreird ietlppkmhe piiprgarqg psqlkrtcsi
     2581 fayedikevh krryllqpia ievfsgdgrn yllafqkgvr nkvyqrflav vpsltdsses
     2641 vsgqrpntsv eqgsgllstl vgeksvtqrw ergeisnfqy lmhlntlagr syndlmqypv
     2701 fpwiladyds eeldltnpkt frnlakpmga qtedrlaqyk krykdwedpn getpayhygt
     2761 hyssamivas ylvrmepftq iflrlqgghf dladrmfhsv reawysaskh nmadvkelip
     2821 effylpefll nsnnfdlgck qngtklgdvi lppwakgdpr efirvhreal ecdfvsahlh
     2881 ewidlifgyk qqgpaaveav nvfhhlfyeg qvdiynindp lketatigfi nnfgqipkql
     2941 fkkphppkrv rsrlngeavg tsvppsstgd kiffhhldnl rpslapvkel kepvgqivct
     3001 dkgilaveqn kvlipptwnk tfawgyadls crlgtyesdk avivyeclse wgqilcaicp
     3061 npklvitggt stavcvwemg vskekakalt lkqallghtd tvtcltasla yhiivsgsrd
     3121 rtciiwdlnk lsfltqlrgh rapisalcin eltgdivsca gtyihvwsin gsptasvntf
     3181 tgrsqqimcc fvsemnewdt qnvivtghsd gvvrfwrmef lqvpetpape pvemlemqed
     3241 cqdaqigqea heedssdsea ddacigqdtk vqenqsqpss tshrprsssa raaaawsads
     3301 gsddsrrwsd qlsldekdgf ifvnysegqa kmhphaqvnh phpsyaearh ysklkpgyrw
     3361 erqlvfrskl tmhtafdrkd nahpaeital giskdhsril igdgrgrvfs wsvsdqpgrs
     3421 aadhwvkdeg gdscsgctvr fslterrhhc rncgqlfcqk csrfqseikr lkisspvrvc
     3481 qncfynlqhe rgseegprn
//
LOCUS       XP_041335736            3499 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat and FYVE domain-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335736
VERSION     XP_041335736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3499
                     /product="WD repeat and FYVE domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=392410
     Region          2506..2629
                     /region_name="PH_BEACH"
                     /note="Pleckstrin homology domain in BEACH domain
                     containing proteins; cd01201"
                     /db_xref="CDD:275391"
     Region          2668..2948
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          <3038..3219
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          3056..3097
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3103..3139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3144..3181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3188..3223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3423..3487
                     /region_name="FYVE_WDFY3"
                     /note="FYVE domain found in WD40 repeat and FYVE
                     domain-containing protein 3 (WDFY3) and similar proteins;
                     cd15719"
                     /db_xref="CDD:277259"
     Site            order(3425,3428,3446..3451,3453..3454,3478..3480)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277259"
     CDS             1..3499
                     /gene="WDFY3"
                     /coded_by="XM_041479802.1:92..10591"
                     /db_xref="GeneID:121360180"
ORIGIN      
        1 mnmvkrimgr prqeecspqd nalglmhlrr lftelchppr hmtqkeqeek lymmlpvfnr
       61 vfgnappstm tekfsdllqf ttqvsrlmvt eirrrasnks teaasraivq flevnqseea
      121 srgwmlltti nllassgqkt vdcmttmsvp stlvkclylf fdlphvpevv ggaqnelpla
      181 errallqkvf vqilvklcsf vspaeelaqk ddlqllfsai tswcppynlp wrksagevlm
      241 tisrhglsvn vvkyihekec lstcvqnmqq sddlspleiv emfaglscfl kdssdvsqtl
      301 lddfriwqgy nflcdlllrl eqakeaeskd alkdlvnlit slttygvnel kpagvttgvp
      361 fllpgfavpq pagkghsvrn iqafsvlqna flraktnyla qiildaiani ymadnanyfi
      421 lesqhtlsqf aekipklpev qtkyfemlel vvfslnyipc kelisvsill ksstsfqcsi
      481 iamrtllkft rhdyifkdvf revgllevmv nllhkyaall kdptqalndq vdsrnssfed
      541 qkqlallvme tltvllqgsn tnagifrefg garcvhnivk ypqcrqhalm iiqqlvlsps
      601 geddmgtllg lmhsapptel qlktdilral llvlreshrt rtvfrkvggf vyvtsllvam
      661 erslcsppkn gwekvnqnqv fellhtvfct ltaamryepa nshffkteiq yekladavrl
      721 lgcfsdlrki splnvfpsnt qlfqrllddd lisldsvspt lrhcsklfiy lykvatdsfd
      781 rhayhsvstp pvcpqkniad vklqtgptsi qsfdaviihp gamlamldll asvgsathpe
      841 haldlqlava nilqslvhte rnqqvmceag lharllqrcs aaladedhsl hpplqrmfer
      901 lasqalqpmv lreflrlgnp lncgawdkkl lkqyrvhkps slsfepemrn smvtsmeglg
      961 pdsvfgvhed shyrisrsll kpaegstvpl trvkclvsmt tphdirlhgs svtpafiefd
     1021 tslegfgclf lpslaphnap tnnavttglv dgavvsgigt gerffpppsg lsystwfcie
     1081 hfstppnnhp vrlltvvrra nsseqhyvcl aivlsakdrs livstkeell qnyvddfsee
     1141 ssfyeilpcc arfrcgdliv egqwhhlvlv mskgmlknst avlyldgqlv ntvklhyihs
     1201 spsgsgsanp pvvstvyayi gtppaqrqls slvwrlgpth fleevlpapg vstiyelgpn
     1261 yvgsfqavyv pckdsksegi npspvslvpe ekvsfglyal svssftvaki rkvynkldsk
     1321 aiakqlaiss henatpvkll hnsaghlngp arsigaalig ylgvrtfvpk pvattlqyig
     1381 gaaailglva masdveglya avkalvcvvk snplaskeme rikgyqllam llkkkrslln
     1441 shilhltfsl vgtvdsghet siipnsaafq dllcdfevwl hapyelhlsl fehfiellte
     1501 sseaaknakl mrefqliprl lltlrdmsls qptiaaisnv lsfllqgfps sydllrfgqf
     1561 isstlptfav cekfvvmevn neekldsgae ddfgglvsan lillrnrlld illkllytsk
     1621 ekttvnlqac eelvktlgfd wimmfmeehl hsttvtaamr ilvvllsnqs iltkfkegls
     1681 gggwldqtds vltnkigtvl gfnvgrsagg rstvreinrd achfpgfpvl qsllpkhtnv
     1741 palyfllmal flqqpvtelp enlqvsapvi ssqcnqgakf dldsiwtfif gvpascgtvt
     1801 ssihsvctea aflllgmlrs mlnspwqsee egswlreypv tlmqffryly hnvpdlislw
     1861 ispeflcala atvfpfntrp ysemvtdldd evgspaeefk afaadsgmnr sqseycnvgt
     1921 ktyltnhpak kfvfdfmrvm iidnlcltpa skqtplvdll leasperstr tqqkefqtyv
     1981 ldgvmdhlla advllgedas lpitsggsyq vlvnnvfyft qrvvdklwqg mfnkeskllv
     2041 dfiiqliaqs krrsqglsld aiyhclnrti lyqfsrahkt vpqqvallds lrvltvnrnl
     2101 ilgpgnhdqe fisclahcli nlhvgsnvdg fgleaearmt twhimipsdi epdgvysqdv
     2161 segrqlllka inrvwtelih skkqvleevf kvtlpvndrg qvditvarpf ieeaslkcwq
     2221 nhlahekkci srgealvpat qsklsrvssg fglskltgsr rnrkesglsk hnlstqeisq
     2281 wmfthiavvr dlvdmqykey qerqqnalky vteewsqiey ellrerglwg ppigshldkw
     2341 mlemtegpcr mrkkmvrndm fytqypympe aeqetsllsd fsnrlpetsd dtipqkkpar
     2401 yrraisydsk eyymrlasgn pavfqdtiee ntvgetaqqe pehgedtiar vkglvkpplk
     2461 rsrsapdggd desqdqsqdq iiegssided ektdnttllr lleegekiqh myrcarvqgl
     2521 dtseglllfg kehfyvidgf tmtatreird ietlppkmhe piiprgarqg psqlkrtcsi
     2581 fayedikevh krryllqpia ievfsgdgrn yllafqkgvr nkvyqrflav vpsltdsses
     2641 vsgqrpntsv eqgsgllstl vgeksvtqrw ergeisnfqy lmhlntlagr syndlmqypv
     2701 fpwiladyds eeldltnpkt frnlakpmga qtedrlaqyk krykdwedpn getpayhygt
     2761 hyssamivas ylvrmepftq iflrlqgghf dladrmfhsv reawysaskh nmadvkelip
     2821 effylpefll nsnnfdlgck qngtklgdvi lppwakgdpr efirvhreal ecdfvsahlh
     2881 ewidlifgyk qqgpaaveav nvfhhlfyeg qvdiynindp lketatigfi nnfgqipkql
     2941 fkkphppkrv rsrlngeavg tsvppsstgd kiffhhldnl rpslapvkel kepvgqivct
     3001 dkgilaveqn kvlipptwnk tfawgyadls crlgtyesdk avivyeclse wgqilcaicp
     3061 npklvitggt stavcvwemg vskekakalt lkqallghtd tvtcltasla yhiivsgsrd
     3121 rtciiwdlnk lsfltqlrgh rapisalcin eltgdivsca gtyihvwsin gsptasvntf
     3181 tgrsqqimcc fvsemnewdt qnvivtghsd gvvrfwrmef lqvpetpape pvemlemqed
     3241 cqdaqigqea heedssdsea ddacigqdtk vqenqsqpss tshrprsssa raaaawsads
     3301 gsddsrrwsd qlsldekdgf ifvnysegqa kmhphaqvnh phpsyaearh ysklkpgyrw
     3361 erqlvfrskl tmhtafdrkd nahpaeital giskdhsril igdgrgrvfs wsvsdqpgrs
     3421 aadhwvkdeg gdscsgctvr fslterrhhc rncgqlfcqk csrfqseikr lkisspvrvc
     3481 qncfynlqhe rgseegprn
//
LOCUS       XP_041335745            3484 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat and FYVE domain-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335745
VERSION     XP_041335745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3484
                     /product="WD repeat and FYVE domain-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=390940
     Region          2491..2614
                     /region_name="PH_BEACH"
                     /note="Pleckstrin homology domain in BEACH domain
                     containing proteins; cd01201"
                     /db_xref="CDD:275391"
     Region          2653..2933
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          <3023..3204
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          3041..3082
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3088..3124
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3129..3166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3173..3208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          3408..3472
                     /region_name="FYVE_WDFY3"
                     /note="FYVE domain found in WD40 repeat and FYVE
                     domain-containing protein 3 (WDFY3) and similar proteins;
                     cd15719"
                     /db_xref="CDD:277259"
     Site            order(3410,3413,3431..3436,3438..3439,3463..3465)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277259"
     CDS             1..3484
                     /gene="WDFY3"
                     /coded_by="XM_041479811.1:513..10967"
                     /db_xref="GeneID:121360180"
ORIGIN      
        1 mnmvkrimgr prqeecspqd nalglmhlrr lftelchppr hmtqkeqeek lymmlpvfnr
       61 vfgnappstm tekfsdllqf ttqvsrlmvt eirrrasnks teaasraivq flevnqseea
      121 srgwmlltti nllassgqkt vdcmttmsvp stlvkclylf fdlphvpevv ggaqnelpla
      181 errallqkvf vqilvklcsf vspaeelaqk ddlqllfsai tswcppynlp wrksagevlm
      241 tisrhglsvn vvkyihekec lstcvqnmqq sddlspleiv emfaglscfl kdssdvsqtl
      301 lddfriwqgy nflcdlllrl eqakeaeskd alkdlvnlit slttygvnel kpagvttgvp
      361 fllpgfavpq pagkghsvrn iqafsvlqna flraktnyla qiildaiani ymadnanyfi
      421 lesqhtlsqf aekipklpev qtkyfemlel vvfslnyipc kelisvsill ksstsfqcsi
      481 iamrtllkft rhdyifkdvf revgllevmv nllhkyaall kdptqalndq vdsrnssfed
      541 qkqlallvme tltvllqgsn tnagifrefg garcvhnivk ypqcrqhalm iiqqlvlsps
      601 geddmgtllg lmhsapptel qlktdilral llvlreshrt rtvfrkvggf vyvtsllvam
      661 erslcsppkn gwekvnqnqv fellhtvfct ltaamryepa nshffkteiq yekladavrl
      721 lgcfsdlrki splnvfpsnt qlfqrllddd lisldsvspt lrhcsklfiy lykvatdsfd
      781 rhayhsvstp pvcpqkniad vklqtgptsi qsfdaviihp gamlamldll asvgsathpe
      841 haldlqlava nilqslvhte rnqqvmceag lharllqrcs aaladedhsl hpplqrmfer
      901 lasqalqpmv lreflrlgnp lncgawdkkl lkqyrvhkps slsfepemrn smvtsmeglg
      961 pdsvfgvhed shyrisrsll kpaegstvpl trvkclvsmt tphdirlhgs svtpafiefd
     1021 tslegfgclf lpslaphnap tnnavttglv dgavvsgigt gerffpppsg lsystwfcie
     1081 hfstppnnhp vrlltvvrra nsseqhyvcl aivlsakdrs livstkeell qnyvddfsee
     1141 ssfyeilpcc arfrcgdliv egqwhhlvlv mskgmlknst avlyldgqlv ntvklhyihs
     1201 spsgsgsanp pvvstvyayi gtppaqrqls slvwrlgpth fleevlpapg vstiyelgpn
     1261 yvgsfqavyv pckdsksegi npspvslvpe ekvsfglyal svssftvaki rkvynkldsk
     1321 aiakqlaiss henatpvkll hnsaghlngp arsigaalig ylgvrtfvpk pvattlqyig
     1381 gaaailglva masdveglya avkalvcvvk snplaskeme rikgyqllam llkkkrslln
     1441 shilhltfsl vgtvdsghet siipnsaafq dllcdfevwl hapyelhlsl fehfiellte
     1501 sseaaknakl mrefqliprl lltlrdmsls qptiaaisnv lsfllqgfps sydllrfgqf
     1561 isstlptfav cekfvvmevn neekldsgae ddfgglvsan lillrnrlld illkllytsk
     1621 ekttvnlqac eelvktlgfd wimmfmeehl hsttvtaamr ilvvllsnqs iltkfkegls
     1681 gggwldqtds vltnkigtvl gfnvgrsagg rstvreinrd achfpgfpvl qsllpkhtnv
     1741 palyfllmal flqqpvtelp enlqfdldsi wtfifgvpas cgtvtssihs vcteaaflll
     1801 gmlrsmlnsp wqseeegswl reypvtlmqf frylyhnvpd lislwispef lcalaatvfp
     1861 fntrpysemv tdlddevgsp aeefkafaad sgmnrsqsey cnvgtktylt nhpakkfvfd
     1921 fmrvmiidnl cltpaskqtp lvdllleasp erstrtqqke fqtyvldgvm dhllaadvll
     1981 gedaslpits ggsyqvlvnn vfyftqrvvd klwqgmfnke skllvdfiiq liaqskrrsq
     2041 glsldaiyhc lnrtilyqfs rahktvpqqv alldslrvlt vnrnlilgpg nhdqefiscl
     2101 ahclinlhvg snvdgfglea earmttwhim ipsdiepdgv ysqdvsegrq lllkainrvw
     2161 telihskkqv leevfkvtlp vndrgqvdit varpfieeas lkcwqnhlah ekkcisrgea
     2221 lvpatqskls rvssgfglsk ltgsrrnrke sglskhnlst qeisqwmfth iavvrdlvdm
     2281 qykeyqerqq nalkyvteew sqieyellre rglwgppigs hldkwmlemt egpcrmrkkm
     2341 vrndmfytqy pympeaeqet sllsdfsnrl petsddtipq kkparyrrai sydskeyymr
     2401 lasgnpavfq dtieentvge taqqepehge dtiarvkglv kpplkrsrsa pdggddesqd
     2461 qsqdqiiegs sidedektdn ttllrlleeg ekiqhmyrca rvqgldtseg lllfgkehfy
     2521 vidgftmtat reirdietlp pkmhepiipr garqgpsqlk rtcsifayed ikevhkrryl
     2581 lqpiaievfs gdgrnyllaf qkgvrnkvyq rflavvpslt dssesvsgqr pntsveqgsg
     2641 llstlvgeks vtqrwergei snfqylmhln tlagrsyndl mqypvfpwil adydseeldl
     2701 tnpktfrnla kpmgaqtedr laqykkrykd wedpngetpa yhygthyssa mivasylvrm
     2761 epftqiflrl qgghfdladr mfhsvreawy saskhnmadv kelipeffyl pefllnsnnf
     2821 dlgckqngtk lgdvilppwa kgdprefirv hrealecdfv sahlhewidl ifgykqqgpa
     2881 aveavnvfhh lfyegqvdiy nindplketa tigfinnfgq ipkqlfkkph ppkrvrsrln
     2941 geavgtsvpp sstgdkiffh hldnlrpsla pvkelkepvg qivctdkgil aveqnkvlip
     3001 ptwnktfawg yadlscrlgt yesdkavivy eclsewgqil caicpnpklv itggtstavc
     3061 vwemgvskek akaltlkqal lghtdtvtcl taslayhiiv sgsrdrtcii wdlnklsflt
     3121 qlrghrapis alcineltgd ivscagtyih vwsingspta svntftgrsq qimccfvsem
     3181 newdtqnviv tghsdgvvrf wrmeflqvpe tpapepveml emqedcqdaq igqeaheeds
     3241 sdseaddaci gqdtkvqenq sqpsstshrp rsssaraaaa wsadsgsdds rrwsdqlsld
     3301 ekdgfifvny segqakmhph aqvnhphpsy aearhysklk pgyrwerqlv frskltmhta
     3361 fdrkdnahpa eitalgiskd hsriligdgr grvfswsvsd qpgrsaadhw vkdeggdscs
     3421 gctvrfslte rrhhcrncgq lfcqkcsrfq seikrlkiss pvrvcqncfy nlqhergsee
     3481 gprn
//
LOCUS       XP_041335758             372 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1K, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041335758
VERSION     XP_041335758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="protein phosphatase 1K, mitochondrial"
                     /calculated_mol_wt=41045
     Region          95..346
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(104,108..109,127..129,298,337)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..372
                     /gene="PPM1K"
                     /coded_by="XM_041479824.1:210..1328"
                     /db_xref="GeneID:121360196"
ORIGIN      
        1 mstatlinlv rnggfqvrrr aaltsrflqd ekrpaaacsi stcerrasrf dpdgsgrptt
       61 wdtfgiwdnr idepillpps ikygkpipkv slsnvgcash igkrkenedr fdyaqltedi
      121 lyfavydghg gaaaadfchk ymekyikefl aeeenlenvl skafleidka yerhanlsad
      181 atllssgtta tvallrdgie lvvasvgdsr allcrkgkpv kltidhtper keekerikkc
      241 ggfiswnslg qphvnarlam trsigdldlk nsgviaqpet krvqlhhadd sflvlttdgi
      301 nfivnsqeic dfisqchdpa eaahvvteqa vqfgsednst vvivpfgawg kykngeitfs
      361 fsrsfassgr wa
//
LOCUS       XP_041335769             372 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1K, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041335769
VERSION     XP_041335769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="protein phosphatase 1K, mitochondrial"
                     /calculated_mol_wt=41045
     Region          95..346
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(104,108..109,127..129,298,337)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..372
                     /gene="PPM1K"
                     /coded_by="XM_041479835.1:166..1284"
                     /db_xref="GeneID:121360196"
ORIGIN      
        1 mstatlinlv rnggfqvrrr aaltsrflqd ekrpaaacsi stcerrasrf dpdgsgrptt
       61 wdtfgiwdnr idepillpps ikygkpipkv slsnvgcash igkrkenedr fdyaqltedi
      121 lyfavydghg gaaaadfchk ymekyikefl aeeenlenvl skafleidka yerhanlsad
      181 atllssgtta tvallrdgie lvvasvgdsr allcrkgkpv kltidhtper keekerikkc
      241 ggfiswnslg qphvnarlam trsigdldlk nsgviaqpet krvqlhhadd sflvlttdgi
      301 nfivnsqeic dfisqchdpa eaahvvteqa vqfgsednst vvivpfgawg kykngeitfs
      361 fsrsfassgr wa
//
LOCUS       XP_041335783            2850 aa            linear   VRT 06-MAY-2021
DEFINITION  lipopolysaccharide-responsive and beige-like anchor protein isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335783
VERSION     XP_041335783.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479849.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2850
                     /product="lipopolysaccharide-responsive and beige-like
                     anchor protein isoform X1"
                     /calculated_mol_wt=316566
     Region          230..377
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          442..922
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <1059..1226
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          1867..2034
                     /region_name="DUF1088"
                     /note="Neurobeachin-like, DUF1088; pfam06469"
                     /db_xref="CDD:461925"
     Region          2060..2157
                     /region_name="PH_BEACH"
                     /note="PH domain associated with Beige/BEACH; pfam14844"
                     /db_xref="CDD:434260"
     Region          2189..2465
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2565..2835
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2581..2617
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2623..2676
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2681..2716
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2725..2756
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2769..2803
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..2850
                     /gene="LRBA"
                     /coded_by="XM_041479849.1:1304..9856"
                     /db_xref="GeneID:121360202"
ORIGIN      
        1 masegkqvvq ptgddgggga gkegnaaegg svlqplnpgv pirgikmkfa vltglvevge
       61 vsnrdivdtv fnllvggqfd lemnfiiqeg egitcmvdll dkcditcqae vwsmftailk
      121 ksirnlqact evglveqvlr ridradnmia dllvdmlgvl asynltvrel klffsklqge
      181 kgrwpphagk llsvlkhmpq kygpdaffnf pgksaaaial ppiakwpyqn gftfhtwlrm
      241 dpvnninvdk dkpylycfrt nkglgysahf vggclivtsi kskgkgfqhc vkfdfkpqkw
      301 ymvtivhiyn rwknselrcy vngelasyge itwfvntsdt fdkcflgsse tadanrvfcg
      361 qmtsvylfse alnaaqifai yqlglgykgt fkfkaesdlf ldehhkllly dgklssaiaf
      421 mynpratdaq lclesspkdn psifvhspha lmlqdvkavl thsiqsalhs iggvqvlfpl
      481 faqldyrqys sdhidttvcs tllafimell knsiamqeqm lsckgflvig hsleksskah
      541 vtravldlcl afskylsnlh ngvpllkqlc dhvllnpaiw ihipaqvqlt lytylstefi
      601 atvniygair rvgtvllvmh tlkyyywvvn pqdrsgvtpk gidgprptqk eilslrafll
      661 mfikqlvmkd ygikedelqa ilnylltihe ddnlmdvlql lvalmsehpg smipafdqrn
      721 glqvvyklla sqsegirvqa lkvmgyflkh lspkrkaevm lghglfslla erlmlqtslf
      781 tmttynvlfe ilteqictqv ihkqhpdpds tvkiqnpqil kviailirns pqcpeslevr
      841 raflsdmikl fnnsrenrrs llqcsvwqew mlslccfnpk tseeqkitem vytifrilly
      901 haikyewggw rvwvdtlsit hskvtfemhk eslsqmykay qekgsegsgv csstpirtis
      961 giskeaetkg kqqsselken aaapscitdg dtecrtekke kenssdggqq thsvsnheee
     1021 legedmgtte dlkavacvef spepetvkps vseistgiae avedssndne lveetaavta
     1081 aslamqtpve ggtptspegl eksavevede ddfvdlkdes slplpsevla erskecgsna
     1141 sevtkqeetk ekqpetgllk segtegvgek sqeltlpetv ssaipevvtq pdaagkkklk
     1201 egnvvtsetk ttventhaqv aepsgasdkr iakldvssva sdterlelka ntcleaplpp
     1261 rsmpessrqq vssgqemaap sdgqrrdtrs avfripefkw slmhqrlltd llfsietdiq
     1321 mwrshstktv mdfvnssdnv vfvhntihli sqvmdnmima cggilpllsa atsathelen
     1381 ieptqglsve asltflqrli nlvdvlifas slgfteiese knmssggilr qclrlvcava
     1441 vrnclecqqh aqmkptgdtg knqkavqgfi gsaksaaksp vdivtggisp irdhdrllqd
     1501 mdinrlravv frdiedskqa qflalavvyf isvlmvskyr dilepqnerr ppnqsqslke
     1561 senennetpv avvqkpsste dsentasmqr resglgeeat paqtnslsga aeagplsvsa
     1621 gpdavsevlc tlslevnksq eggsemgtee iksvasvpaa knvnvkdilr slvstpadgt
     1681 avdaallppa flgvlgdgaa eqpvqfhsfd rsvvvptkks sissstaaig aptnavsvvs
     1741 sldsaqapel sgespgrgss nsklpsvpav ssvpedsasn msitdrleha lekaapllre
     1801 ifvdfapfls rtllgshgqe lliegtslvc mkssssvvel vmllcsqewq nsiqknagla
     1861 fielvnegrl lsqtmkehlv rvaneaefil srqraedinr haefeslcaq ysadkreeek
     1921 mchhlitaak yrdqvtatql iqkiiniltd khgawgssap srprefwrld yweddlrrrr
     1981 rfvrnplgst hpeatlraag ehapdedilv kgkqsiksqv lgnqnsesev llegdddims
     2041 fmeerevenl tgpvslstpa qlvapsavvk gtlsitlsel yfevdeedps fkkidpkila
     2101 yteglhgkwl fseirsifsr ryllqntale ifmanrvgvm fnfpdqatvk kvvnclprvg
     2161 igtifglpqt rrislasprq ifkasnmtqr wqhreisnfe ylmflntiag rtyndlnqyp
     2221 vfpwvitnye seeldltlps nfrdlskpig alnpkraaff aeryeswedd qvpkfhygth
     2281 ystasfaltw llriepfttl flnlqggkfd hadrtfssis rawrnsqrdt sdikelipef
     2341 yylpeifvns nnynlgvmdd gtvvsdvelp pwaktpeefv rinrlalese fvscqlhqwi
     2401 dlifgykqqg peavrslnvf yyltyegavn lssitdsvlr eaveaqirsf gqtpsqllie
     2461 phpprssamq vylllqsplm fteqaqqdvi mvlkfpsnsp vthvaantqp glatpavitv
     2521 tanrlfavnk whslpahqga vqdqpyqlpv eidpliasnt gmhrrqitdl ldqsiqvhsq
     2581 cfvitsdnry ilvcgfwdks frvystdsgk lmqvvfghwd vvtclarses yiggncyils
     2641 gsrdatlllw ywngktsiig dnprgdfatp ravltghdye itcaaicael glvisgskeg
     2701 pclihsmngd llrtlegper lqgpesclrp kliqasregh cviyyenglf cvfsvngrlq
     2761 atmetddkir aiqlsrdgqy lltggdngvv mvwqvwdlkr lfaypgcdag irsmalsydq
     2821 rcimtgmasg sivvfyndfn rwhheyqtry
//
LOCUS       XP_041335793            2848 aa            linear   VRT 06-MAY-2021
DEFINITION  lipopolysaccharide-responsive and beige-like anchor protein isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335793
VERSION     XP_041335793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2848
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2848
                     /product="lipopolysaccharide-responsive and beige-like
                     anchor protein isoform X2"
                     /calculated_mol_wt=316378
     Region          230..377
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          442..922
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <1059..1226
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          1865..2032
                     /region_name="DUF1088"
                     /note="Neurobeachin-like, DUF1088; pfam06469"
                     /db_xref="CDD:461925"
     Region          2058..2155
                     /region_name="PH_BEACH"
                     /note="PH domain associated with Beige/BEACH; pfam14844"
                     /db_xref="CDD:434260"
     Region          2187..2463
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2563..2833
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2579..2615
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2621..2674
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2679..2714
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2723..2754
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2767..2801
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..2848
                     /gene="LRBA"
                     /coded_by="XM_041479859.1:1304..9850"
                     /db_xref="GeneID:121360202"
ORIGIN      
        1 masegkqvvq ptgddgggga gkegnaaegg svlqplnpgv pirgikmkfa vltglvevge
       61 vsnrdivdtv fnllvggqfd lemnfiiqeg egitcmvdll dkcditcqae vwsmftailk
      121 ksirnlqact evglveqvlr ridradnmia dllvdmlgvl asynltvrel klffsklqge
      181 kgrwpphagk llsvlkhmpq kygpdaffnf pgksaaaial ppiakwpyqn gftfhtwlrm
      241 dpvnninvdk dkpylycfrt nkglgysahf vggclivtsi kskgkgfqhc vkfdfkpqkw
      301 ymvtivhiyn rwknselrcy vngelasyge itwfvntsdt fdkcflgsse tadanrvfcg
      361 qmtsvylfse alnaaqifai yqlglgykgt fkfkaesdlf ldehhkllly dgklssaiaf
      421 mynpratdaq lclesspkdn psifvhspha lmlqdvkavl thsiqsalhs iggvqvlfpl
      481 faqldyrqys sdhidttvcs tllafimell knsiamqeqm lsckgflvig hsleksskah
      541 vtravldlcl afskylsnlh ngvpllkqlc dhvllnpaiw ihipaqvqlt lytylstefi
      601 atvniygair rvgtvllvmh tlkyyywvvn pqdrsgvtpk gidgprptqk eilslrafll
      661 mfikqlvmkd ygikedelqa ilnylltihe ddnlmdvlql lvalmsehpg smipafdqrn
      721 glqvvyklla sqsegirvqa lkvmgyflkh lspkrkaevm lghglfslla erlmlqtslf
      781 tmttynvlfe ilteqictqv ihkqhpdpds tvkiqnpqil kviailirns pqcpeslevr
      841 raflsdmikl fnnsrenrrs llqcsvwqew mlslccfnpk tseeqkitem vytifrilly
      901 haikyewggw rvwvdtlsit hskvtfemhk eslsqmykay qekgsegsgv csstpirtis
      961 giskeaetkg kqqsselken aaapscitdg dtecrtekke kenssdggqq thsvsnheee
     1021 legedmgtte dlkavacvef spepetvkps vseistgiae avedssndne lveetaavta
     1081 aslamqtpve ggtptspegl eksavevede ddfvdlkdes slplpsevla erskecgsna
     1141 sevtkqeetk ekqpetgllk segtegvgek sqeltlpetv ssaipevvtq pdaagkkklk
     1201 egnvvtsetk ttventhaqv aepsgasdkr iakldvssva sdterlelka ntcleaplpp
     1261 rsmpessrqq vssgqemaap sdgqrrdtrs avfripefkw slmhqrlltd llfsietdiq
     1321 mwrshstktv mdfvnssdnv vfvhntihli sqvmdnmima cggilpllsa atsathelen
     1381 ieptqglsve asltflqrli nlvdvlifas slgfteiese knmssggilr qclrlvcava
     1441 vrnclecqqh aqmkptgdtg knqkavqgfi gsaksaaksp vdivtggisp irdhdrllqd
     1501 mdinrlravv frdiedskqa qflalavvyf isvlmvskyr dilepqnerr ppnqsqslke
     1561 senennetpv avvqkpsste dsentasmqr resglgeeat paqtnslsga aeagplsvsa
     1621 gpdavsevlc tlslevnksq eggsemgtee iksvasvpaa knvnvkdilr slvstpadgt
     1681 avdaallppa flgvlgdgaa eqpvqfhsfd rsvvvptkks sissstaaig aptnavsvvs
     1741 sldsaqapel sgespgrgss nsklpsvpav ssvpedsasn msitdrleha lekaapllre
     1801 ifvdfapfls rtllgshgqe llieglvcmk ssssvvelvm llcsqewqns iqknaglafi
     1861 elvnegrlls qtmkehlvrv aneaefilsr qraedinrha efeslcaqys adkreeekmc
     1921 hhlitaakyr dqvtatqliq kiiniltdkh gawgssapsr prefwrldyw eddlrrrrrf
     1981 vrnplgsthp eatlraageh apdedilvkg kqsiksqvlg nqnsesevll egdddimsfm
     2041 eerevenltg pvslstpaql vapsavvkgt lsitlselyf evdeedpsfk kidpkilayt
     2101 eglhgkwlfs eirsifsrry llqntaleif manrvgvmfn fpdqatvkkv vnclprvgig
     2161 tifglpqtrr islasprqif kasnmtqrwq hreisnfeyl mflntiagrt yndlnqypvf
     2221 pwvitnyese eldltlpsnf rdlskpigal npkraaffae ryesweddqv pkfhygthys
     2281 tasfaltwll riepfttlfl nlqggkfdha drtfssisra wrnsqrdtsd ikelipefyy
     2341 lpeifvnsnn ynlgvmddgt vvsdvelppw aktpeefvri nrlalesefv scqlhqwidl
     2401 ifgykqqgpe avrslnvfyy ltyegavnls sitdsvlrea veaqirsfgq tpsqllieph
     2461 pprssamqvy lllqsplmft eqaqqdvimv lkfpsnspvt hvaantqpgl atpavitvta
     2521 nrlfavnkwh slpahqgavq dqpyqlpvei dpliasntgm hrrqitdlld qsiqvhsqcf
     2581 vitsdnryil vcgfwdksfr vystdsgklm qvvfghwdvv tclarsesyi ggncyilsgs
     2641 rdatlllwyw ngktsiigdn prgdfatpra vltghdyeit caaicaelgl visgskegpc
     2701 lihsmngdll rtlegperlq gpesclrpkl iqasreghcv iyyenglfcv fsvngrlqat
     2761 metddkirai qlsrdgqyll tggdngvvmv wqvwdlkrlf aypgcdagir smalsydqrc
     2821 imtgmasgsi vvfyndfnrw hheyqtry
//
LOCUS       XP_041335802            2846 aa            linear   VRT 06-MAY-2021
DEFINITION  lipopolysaccharide-responsive and beige-like anchor protein isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041335802
VERSION     XP_041335802.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479868.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2846
                     /product="lipopolysaccharide-responsive and beige-like
                     anchor protein isoform X3"
                     /calculated_mol_wt=315589
     Region          230..377
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          442..922
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <1059..1226
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          1867..2034
                     /region_name="DUF1088"
                     /note="Neurobeachin-like, DUF1088; pfam06469"
                     /db_xref="CDD:461925"
     Region          2060..2157
                     /region_name="PH_BEACH"
                     /note="PH domain associated with Beige/BEACH; pfam14844"
                     /db_xref="CDD:434260"
     Region          2189..2465
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2565..2817
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2581..2617
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2623..2676
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2681..2716
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2725..2756
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2769..2803
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..2846
                     /gene="LRBA"
                     /coded_by="XM_041479868.1:1304..9844"
                     /db_xref="GeneID:121360202"
ORIGIN      
        1 masegkqvvq ptgddgggga gkegnaaegg svlqplnpgv pirgikmkfa vltglvevge
       61 vsnrdivdtv fnllvggqfd lemnfiiqeg egitcmvdll dkcditcqae vwsmftailk
      121 ksirnlqact evglveqvlr ridradnmia dllvdmlgvl asynltvrel klffsklqge
      181 kgrwpphagk llsvlkhmpq kygpdaffnf pgksaaaial ppiakwpyqn gftfhtwlrm
      241 dpvnninvdk dkpylycfrt nkglgysahf vggclivtsi kskgkgfqhc vkfdfkpqkw
      301 ymvtivhiyn rwknselrcy vngelasyge itwfvntsdt fdkcflgsse tadanrvfcg
      361 qmtsvylfse alnaaqifai yqlglgykgt fkfkaesdlf ldehhkllly dgklssaiaf
      421 mynpratdaq lclesspkdn psifvhspha lmlqdvkavl thsiqsalhs iggvqvlfpl
      481 faqldyrqys sdhidttvcs tllafimell knsiamqeqm lsckgflvig hsleksskah
      541 vtravldlcl afskylsnlh ngvpllkqlc dhvllnpaiw ihipaqvqlt lytylstefi
      601 atvniygair rvgtvllvmh tlkyyywvvn pqdrsgvtpk gidgprptqk eilslrafll
      661 mfikqlvmkd ygikedelqa ilnylltihe ddnlmdvlql lvalmsehpg smipafdqrn
      721 glqvvyklla sqsegirvqa lkvmgyflkh lspkrkaevm lghglfslla erlmlqtslf
      781 tmttynvlfe ilteqictqv ihkqhpdpds tvkiqnpqil kviailirns pqcpeslevr
      841 raflsdmikl fnnsrenrrs llqcsvwqew mlslccfnpk tseeqkitem vytifrilly
      901 haikyewggw rvwvdtlsit hskvtfemhk eslsqmykay qekgsegsgv csstpirtis
      961 giskeaetkg kqqsselken aaapscitdg dtecrtekke kenssdggqq thsvsnheee
     1021 legedmgtte dlkavacvef spepetvkps vseistgiae avedssndne lveetaavta
     1081 aslamqtpve ggtptspegl eksavevede ddfvdlkdes slplpsevla erskecgsna
     1141 sevtkqeetk ekqpetgllk segtegvgek sqeltlpetv ssaipevvtq pdaagkkklk
     1201 egnvvtsetk ttventhaqv aepsgasdkr iakldvssva sdterlelka ntcleaplpp
     1261 rsmpessrqq vssgqemaap sdgqrrdtrs avfripefkw slmhqrlltd llfsietdiq
     1321 mwrshstktv mdfvnssdnv vfvhntihli sqvmdnmima cggilpllsa atsathelen
     1381 ieptqglsve asltflqrli nlvdvlifas slgfteiese knmssggilr qclrlvcava
     1441 vrnclecqqh aqmkptgdtg knqkavqgfi gsaksaaksp vdivtggisp irdhdrllqd
     1501 mdinrlravv frdiedskqa qflalavvyf isvlmvskyr dilepqnerr ppnqsqslke
     1561 senennetpv avvqkpsste dsentasmqr resglgeeat paqtnslsga aeagplsvsa
     1621 gpdavsevlc tlslevnksq eggsemgtee iksvasvpaa knvnvkdilr slvstpadgt
     1681 avdaallppa flgvlgdgaa eqpvqfhsfd rsvvvptkks sissstaaig aptnavsvvs
     1741 sldsaqapel sgespgrgss nsklpsvpav ssvpedsasn msitdrleha lekaapllre
     1801 ifvdfapfls rtllgshgqe lliegtslvc mkssssvvel vmllcsqewq nsiqknagla
     1861 fielvnegrl lsqtmkehlv rvaneaefil srqraedinr haefeslcaq ysadkreeek
     1921 mchhlitaak yrdqvtatql iqkiiniltd khgawgssap srprefwrld yweddlrrrr
     1981 rfvrnplgst hpeatlraag ehapdedilv kgkqsiksqv lgnqnsesev llegdddims
     2041 fmeerevenl tgpvslstpa qlvapsavvk gtlsitlsel yfevdeedps fkkidpkila
     2101 yteglhgkwl fseirsifsr ryllqntale ifmanrvgvm fnfpdqatvk kvvnclprvg
     2161 igtifglpqt rrislasprq ifkasnmtqr wqhreisnfe ylmflntiag rtyndlnqyp
     2221 vfpwvitnye seeldltlps nfrdlskpig alnpkraaff aeryeswedd qvpkfhygth
     2281 ystasfaltw llriepfttl flnlqggkfd hadrtfssis rawrnsqrdt sdikelipef
     2341 yylpeifvns nnynlgvmdd gtvvsdvelp pwaktpeefv rinrlalese fvscqlhqwi
     2401 dlifgykqqg peavrslnvf yyltyegavn lssitdsvlr eaveaqirsf gqtpsqllie
     2461 phpprssamq vylllqsplm fteqaqqdvi mvlkfpsnsp vthvaantqp glatpavitv
     2521 tanrlfavnk whslpahqga vqdqpyqlpv eidpliasnt gmhrrqitdl ldqsiqvhsq
     2581 cfvitsdnry ilvcgfwdks frvystdsgk lmqvvfghwd vvtclarses yiggncyils
     2641 gsrdatlllw ywngktsiig dnprgdfatp ravltghdye itcaaicael glvisgskeg
     2701 pclihsmngd llrtlegper lqgpesclrp kliqasregh cviyyenglf cvfsvngrlq
     2761 atmetddkir aiqlsrdgqy lltggdngvv mvwqvwdlkr lfaypgcdag irsmalsydq
     2821 ralldqemls qtgstavpvc avlsci
//
LOCUS       XP_041335812            2845 aa            linear   VRT 06-MAY-2021
DEFINITION  lipopolysaccharide-responsive and beige-like anchor protein isoform
            X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041335812
VERSION     XP_041335812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2845
                     /product="lipopolysaccharide-responsive and beige-like
                     anchor protein isoform X4"
                     /calculated_mol_wt=315935
     Region          230..377
                     /region_name="Laminin_G_3"
                     /note="Concanavalin A-like lectin/glucanases superfamily;
                     pfam13385"
                     /db_xref="CDD:463865"
     Region          442..922
                     /region_name="DUF4704"
                     /note="Neurobeachin/BDCP, DUF4704 alpha solenoid region;
                     pfam15787"
                     /db_xref="CDD:464870"
     Region          <1059..1226
                     /region_name="LGT"
                     /note="Prolipoprotein diacylglyceryl transferase; cl00478"
                     /db_xref="CDD:469786"
     Region          1867..2034
                     /region_name="DUF1088"
                     /note="Neurobeachin-like, DUF1088; pfam06469"
                     /db_xref="CDD:461925"
     Region          2060..2157
                     /region_name="PH_BEACH"
                     /note="PH domain associated with Beige/BEACH; pfam14844"
                     /db_xref="CDD:434260"
     Region          2189..2465
                     /region_name="Beach"
                     /note="Beige/BEACH domain; pfam02138"
                     /db_xref="CDD:460459"
     Region          2560..2830
                     /region_name="NBCH_WD40"
                     /note="Neurobeachin beta propeller domain; pfam20426"
                     /db_xref="CDD:466575"
     Region          2576..2612
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2618..2671
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2676..2711
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2720..2751
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2764..2798
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..2845
                     /gene="LRBA"
                     /coded_by="XM_041479878.1:1304..9841"
                     /db_xref="GeneID:121360202"
ORIGIN      
        1 masegkqvvq ptgddgggga gkegnaaegg svlqplnpgv pirgikmkfa vltglvevge
       61 vsnrdivdtv fnllvggqfd lemnfiiqeg egitcmvdll dkcditcqae vwsmftailk
      121 ksirnlqact evglveqvlr ridradnmia dllvdmlgvl asynltvrel klffsklqge
      181 kgrwpphagk llsvlkhmpq kygpdaffnf pgksaaaial ppiakwpyqn gftfhtwlrm
      241 dpvnninvdk dkpylycfrt nkglgysahf vggclivtsi kskgkgfqhc vkfdfkpqkw
      301 ymvtivhiyn rwknselrcy vngelasyge itwfvntsdt fdkcflgsse tadanrvfcg
      361 qmtsvylfse alnaaqifai yqlglgykgt fkfkaesdlf ldehhkllly dgklssaiaf
      421 mynpratdaq lclesspkdn psifvhspha lmlqdvkavl thsiqsalhs iggvqvlfpl
      481 faqldyrqys sdhidttvcs tllafimell knsiamqeqm lsckgflvig hsleksskah
      541 vtravldlcl afskylsnlh ngvpllkqlc dhvllnpaiw ihipaqvqlt lytylstefi
      601 atvniygair rvgtvllvmh tlkyyywvvn pqdrsgvtpk gidgprptqk eilslrafll
      661 mfikqlvmkd ygikedelqa ilnylltihe ddnlmdvlql lvalmsehpg smipafdqrn
      721 glqvvyklla sqsegirvqa lkvmgyflkh lspkrkaevm lghglfslla erlmlqtslf
      781 tmttynvlfe ilteqictqv ihkqhpdpds tvkiqnpqil kviailirns pqcpeslevr
      841 raflsdmikl fnnsrenrrs llqcsvwqew mlslccfnpk tseeqkitem vytifrilly
      901 haikyewggw rvwvdtlsit hskvtfemhk eslsqmykay qekgsegsgv csstpirtis
      961 giskeaetkg kqqsselken aaapscitdg dtecrtekke kenssdggqq thsvsnheee
     1021 legedmgtte dlkavacvef spepetvkps vseistgiae avedssndne lveetaavta
     1081 aslamqtpve ggtptspegl eksavevede ddfvdlkdes slplpsevla erskecgsna
     1141 sevtkqeetk ekqpetgllk segtegvgek sqeltlpetv ssaipevvtq pdaagkkklk
     1201 egnvvtsetk ttventhaqv aepsgasdkr iakldvssva sdterlelka ntcleaplpp
     1261 rsmpessrqq vssgqemaap sdgqrrdtrs avfripefkw slmhqrlltd llfsietdiq
     1321 mwrshstktv mdfvnssdnv vfvhntihli sqvmdnmima cggilpllsa atsathelen
     1381 ieptqglsve asltflqrli nlvdvlifas slgfteiese knmssggilr qclrlvcava
     1441 vrnclecqqh aqmkptgdtg knqkavqgfi gsaksaaksp vdivtggisp irdhdrllqd
     1501 mdinrlravv frdiedskqa qflalavvyf isvlmvskyr dilepqnerr ppnqsqslke
     1561 senennetpv avvqkpsste dsentasmqr resglgeeat paqtnslsga aeagplsvsa
     1621 gpdavsevlc tlslevnksq eggsemgtee iksvasvpaa knvnvkdilr slvstpadgt
     1681 avdaallppa flgvlgdgaa eqpvqfhsfd rsvvvptkks sissstaaig aptnavsvvs
     1741 sldsaqapel sgespgrgss nsklpsvpav ssvpedsasn msitdrleha lekaapllre
     1801 ifvdfapfls rtllgshgqe lliegtslvc mkssssvvel vmllcsqewq nsiqknagla
     1861 fielvnegrl lsqtmkehlv rvaneaefil srqraedinr haefeslcaq ysadkreeek
     1921 mchhlitaak yrdqvtatql iqkiiniltd khgawgssap srprefwrld yweddlrrrr
     1981 rfvrnplgst hpeatlraag ehapdedilv kgkqsiksqv lgnqnsesev llegdddims
     2041 fmeerevenl tgpvslstpa qlvapsavvk gtlsitlsel yfevdeedps fkkidpkila
     2101 yteglhgkwl fseirsifsr ryllqntale ifmanrvgvm fnfpdqatvk kvvnclprvg
     2161 igtifglpqt rrislasprq ifkasnmtqr wqhreisnfe ylmflntiag rtyndlnqyp
     2221 vfpwvitnye seeldltlps nfrdlskpig alnpkraaff aeryeswedd qvpkfhygth
     2281 ystasfaltw llriepfttl flnlqggkfd hadrtfssis rawrnsqrdt sdikelipef
     2341 yylpeifvns nnynlgvmdd gtvvsdvelp pwaktpeefv rinrlalese fvscqlhqwi
     2401 dlifgykqqg peavrslnvf yyltyegavn lssitdsvlr eaveaqirsf gqtpsqllie
     2461 phpprssamq vsplmfteqa qqdvimvlkf psnspvthva antqpglatp avitvtanrl
     2521 favnkwhslp ahqgavqdqp yqlpveidpl iasntgmhrr qitdlldqsi qvhsqcfvit
     2581 sdnryilvcg fwdksfrvys tdsgklmqvv fghwdvvtcl arsesyiggn cyilsgsrda
     2641 tlllwywngk tsiigdnprg dfatpravlt ghdyeitcaa icaelglvis gskegpclih
     2701 smngdllrtl egperlqgpe sclrpkliqa sreghcviyy englfcvfsv ngrlqatmet
     2761 ddkiraiqls rdgqylltgg dngvvmvwqv wdlkrlfayp gcdagirsma lsydqrcimt
     2821 gmasgsivvf yndfnrwhhe yqtry
//
LOCUS       XP_041335826             708 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase DCLK2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335826
VERSION     XP_041335826.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479892.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="serine/threonine-protein kinase DCLK2"
                     /calculated_mol_wt=77629
     Region          68..152
                     /region_name="DCX1_DCLK2"
                     /note="Dublecortin-like domain 1 found in
                     doublecortin-like kinase 2 (DCLK2); cd17141"
                     /db_xref="CDD:340661"
     Site            order(68,79..81,87,92..93,95,103,111..113,115..116,119,
                     146)
                     /site_type="other"
                     /note="putative tubulin binding site [polypeptide
                     binding]"
                     /db_xref="CDD:340661"
     Site            order(83,128)
                     /site_type="other"
                     /note="key conserved lysines"
                     /db_xref="CDD:340661"
     Region          191..274
                     /region_name="DCX2"
                     /note="Dublecortin-like domain 2; cd17069"
                     /db_xref="CDD:340589"
     Site            order(193,204..206,212,217..218,220,228,237..238,241,268)
                     /site_type="other"
                     /note="putative DCX-stabilized microtubules [polypeptide
                     binding]"
                     /db_xref="CDD:340589"
     Site            order(208,249)
                     /site_type="other"
                     /note="key conserved lysines"
                     /db_xref="CDD:340589"
     Region          404..662
                     /region_name="STKc_DCKL2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Doublecortin-like kinase 2 (also called Doublecortin-like
                     and CAM kinase-like 2); cd14184"
                     /db_xref="CDD:271086"
     Site            order(412..416,420,433,435,465,481..484,488,490,526..527,
                     529,531..532,534,548..549,552,564..568,570)
                     /site_type="active"
                     /db_xref="CDD:271086"
     Site            order(412..415,420,433,435,465,481..484,488,531..532,534,
                     548..549)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271086"
     Site            order(416,488,490,526..527,529,531,552,564..568,570)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271086"
     Site            548..568
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271086"
     CDS             1..708
                     /gene="DCLK2"
                     /coded_by="XM_041479892.1:513..2639"
                     /db_xref="GeneID:121360216"
ORIGIN      
        1 massrsiele hfeerdkrqq rsrprrggsg sgggagprgn glvpspahsa hcslyrtrtl
       61 qalssekkar karfyrngdr yfkglvyais pdrfrsfdal lveltrslsd nvnlpqgvrt
      121 iytidgskkl tsldelvege syvcasnepy rkvdytknvn pnwcvnirtg ssrsltslts
      181 trsevkeskd fikpklvtvi rsgvkprkav rillnkktah sfeqvlndit eaikldsgvv
      241 krlctldgkq vtclqdffgd ddvfiacgpe kyryaqddfv ldhsecrvmk sysrssamrh
      301 aaskspgpsr rskspasvkt gghssahssa kspvngtpss qlstpkstks ssssptspgs
      361 frglkisphg gsssnvngvp eslrcqspeg lngnkfsgss tilekykvgk vigdgnfavv
      421 kecverstgk efalkiidka kccgkehlie nevsilrrvk hpniimliee mdtptelylv
      481 melvkggdlf daitsstkyt erdgsamvyn lasalkylhg lnivhrdikp enllvceysd
      541 gtkslklgdf glatvvegpl ytvcgtptyv apeiiaetgy glkvdiwaag vityillcgf
      601 ppfrsennlq edlfdqilvg klefpspywd nitdsakeli slmlhvnaea rytaaqilsh
      661 pwvsddasqe nnmqaevtgk lkqhfnntip kqnntsagvs vimfdltv
//
LOCUS       XP_041335839             359 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mab-21-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335839
VERSION     XP_041335839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..359
                     /product="protein mab-21-like 2"
                     /calculated_mol_wt=40776
     Region          62..242
                     /region_name="Mab-21"
                     /note="Mab-21 protein nucleotidyltransferase domain;
                     pfam03281"
                     /db_xref="CDD:460873"
     Region          246..344
                     /region_name="Mab-21_C"
                     /note="Mab-21 protein HhH/H2TH-like domain; pfam20266"
                     /db_xref="CDD:466416"
     CDS             1..359
                     /gene="MAB21L2"
                     /coded_by="XM_041479905.1:429..1508"
                     /db_xref="GeneID:121360222"
ORIGIN      
        1 miaaqaklvy qlnkyyterc qarkaaiakt irevckvvsd vlkevevqep rfisslseid
       61 aryeglevis ptefevvlyl nqmgvfnfvd dgslpgcavl klsdgrkrsm slwvefitas
      121 gylsarkirs rfqtlvaqav dkcsyrdvvk miadtsevkl rireryvvqi tpafkctgiw
      181 prsaaqwpmp hipwpgpnrv aevkaegfnl lskecysltg kqssaesdaw vlqfgeaenr
      241 llmggcrnkc lsvlktlrdr hlelpgqpln nyhmktllly ecekhpretd wdeaclgdrl
      301 ngillqlisc lqcrrcphyf lpnldlfqgk phsalesaak qtwrlareil tnpksldkl
//
LOCUS       XP_041335852             679 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: SPARC-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335852
VERSION     XP_041335852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479918.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..679
                     /product="LOW QUALITY PROTEIN: SPARC-like protein 1"
                     /calculated_mol_wt=78745
     Region          448..527
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cl00097"
                     /db_xref="CDD:412159"
     Region          530..670
                     /region_name="EFh_SPARC_EC"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted protein acidic and rich in cysteine
                     (SPARC)-like proteins; cl25349"
                     /db_xref="CDD:330171"
     Region          603..635
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320009"
     Site            order(615,620,627,650,652,654,661)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320009"
     Region          638..668
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320009"
     CDS             1..679
                     /gene="SPARCL1"
                     /coded_by="XM_041479918.1:1..2040"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121360230"
ORIGIN      
        1 mkavalfixl veplfaisth pvnhklrthr qktpekseyf hpeaskeent gyvdksgllp
       61 tprnxkpgse drdepqtmrk rgrtgsehqv knslksinfl vlhnklglas dnqdsdsgss
      121 greqsnsehe qlrkhekhgn manrhlpgqa ehpvgafsfh hehnmwkhnk nsaglsekns
      181 enddeesmee edekwgeetd yrdtkhkdhq trqgdqykrq qhensmqlde llsdssqptw
      241 ktkrhsekfd leeeerenrk ksykeiplsq kthneyqdgk qqsqerkhhi qvnyqsdhdt
      301 vvkihdreds ndedghdsgd idheeylsnt wketayeeee riqsndqest stepegegtt
      361 eddtavhret edyqivkied vahseqdyyd qeppdsdnkq qlkisssiqn insmdsedkv
      421 kttdsshgem esvsnrneea llglpdtcwn fhckrgkvch adkqgkphci cqdpaacppt
      481 kdyehvcgtd nktydgtcql fgtkcqlegt kigrqlhldy mgsckhippc tdyevdqfpl
      541 rmrdwlknil iqyyerdlnt sgiltekqrn kvkkiyqndk rlvagdhpve lllhdfekny
      601 hmyvypvhwq fhqldqhpvd rllthselap lraslvpmeh citrffqecn gdqdklialk
      661 ewchcfgike edinenllf
//
LOCUS       XP_041335865             534 aa            linear   VRT 06-MAY-2021
DEFINITION  dentin matrix acidic phosphoprotein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041335865
VERSION     XP_041335865.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479931.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="dentin matrix acidic phosphoprotein 1-like"
                     /calculated_mol_wt=57384
     Region          149..534
                     /region_name="DMP1"
                     /note="Dentin matrix protein 1 (DMP1); pfam07263"
                     /db_xref="CDD:462128"
     CDS             1..534
                     /gene="LOC121360238"
                     /coded_by="XM_041479931.1:44..1648"
                     /db_xref="GeneID:121360238"
ORIGIN      
        1 mraaflvlll wavacaypvp ghepthpsal qedtanegyi gklgnhldgg dgrhppaspe
       61 tgenalsrdl aggnavdeel gelsgqdvgd qvgqaqhvnq vdhedmsann gndlgflead
      121 ardtddadnr dhygtrangf pshgggflde eddsgddtfd aneeeerdeg ptyvaganga
      181 gehehdtghg dagagvghss ssssestgad hqryrnygfg htyrhrgass ssqevesydf
      241 qdeamqgddp svfdgpgssy rmrhtgpral gnsgesaqga gshhweegds rspevedgds
      301 gedspsvenn sqseepvdsq seekssshsk edgdgdgedn psrkdedres rettdeqsde
      361 epgetpevvr tlnehsnsqt wegqedwdsa egrsvlstpd sesreeegel sksrededdq
      421 shstedtvee seedendsvp stsaespelp edesspednt gedsrstesd nsesqededd
      481 aeshsqedat ressshgdds slqslehggr kqrlgalrlr paadyddndc qdgy
//
LOCUS       XP_041335878             346 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribose pyrophosphatase, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335878
VERSION     XP_041335878.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479944.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="ADP-ribose pyrophosphatase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=39018
     Region          146..332
                     /region_name="NUDIX_ADPRase_Nudt9"
                     /note="ADP-ribose pyrophosphatase; cd03670"
                     /db_xref="CDD:467538"
     CDS             1..346
                     /gene="NUDT9"
                     /coded_by="XM_041479944.1:248..1288"
                     /db_xref="GeneID:121360244"
ORIGIN      
        1 mpllagalpr vvvvlsfsvl lrvrgaaqrr pahsnvsasc wsrlhpvnmf nrynvkfhhr
       61 kaltspypgs hiersqvped kvgwltewed ydpveytaks vlarpnwadp qindedfspk
      121 fnerdgever kslnglyvve ngrprnpagr tgltgrgllg rwgpnhaadp vvtrwkrdgs
      181 gnkiahpvsg knilqfvaik rrdcgewaip ggmvdpgeki tatlkrefee ealnslqksp
      241 eekaklekql qklfsqehfv vyrgyvddpr ntdnawmete avnyhdetge tmdnlpleag
      301 ddagvvkwvd iseklelyas hsyfiklvte krgahwsedp gsechk
//
LOCUS       XP_041335887             298 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribose pyrophosphatase, mitochondrial isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041335887
VERSION     XP_041335887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="ADP-ribose pyrophosphatase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=33846
     Region          98..284
                     /region_name="NUDIX_ADPRase_Nudt9"
                     /note="ADP-ribose pyrophosphatase; cd03670"
                     /db_xref="CDD:467538"
     CDS             1..298
                     /gene="NUDT9"
                     /coded_by="XM_041479953.1:180..1076"
                     /db_xref="GeneID:121360244"
ORIGIN      
        1 mfnrynvkfh hrkaltspyp gshiersqvp edkvgwltew edydpveyta ksvlarpnwa
       61 dpqindedfs pkfnerdgev erkslnglyv vengrprnpa grtgltgrgl lgrwgpnhaa
      121 dpvvtrwkrd gsgnkiahpv sgknilqfva ikrrdcgewa ipggmvdpge kitatlkref
      181 eeealnslqk speekaklek qlqklfsqeh fvvyrgyvdd prntdnawme teavnyhdet
      241 getmdnlple agddagvvkw vdiseklely ashsyfiklv tekrgahwse dpgsechk
//
LOCUS       XP_041335899             261 aa            linear   VRT 06-MAY-2021
DEFINITION  bone sialoprotein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335899
VERSION     XP_041335899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="bone sialoprotein 2"
                     /calculated_mol_wt=28293
     Region          <116..258
                     /region_name="BSP_II"
                     /note="Bone sialoprotein II (BSP-II); pfam05432"
                     /db_xref="CDD:461651"
     CDS             1..261
                     /gene="LOC121360255"
                     /coded_by="XM_041479965.1:71..856"
                     /db_xref="GeneID:121360255"
ORIGIN      
        1 mrtllvhwlc vpmmapgtrf paaemqgsds seeegdgsee eeegepfyag traaghpaga
       61 apedcqgalg gdvtsphqgk gcqrirqrtg skgedsened sdeneeeeev denengvngt
      121 stnttegigp hgndtmvaee gtgeaeeeee eeeeeeeeee eeaeattias ttneegltqa
      181 ttmddggpid vttdattagg lweydvtard hsrgdegtte ggyeeqdeya rgdsyrayed
      241 eysyykghgy dvygqdyyys q
//
LOCUS       XP_041335912             453 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidate cytidylyltransferase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335912
VERSION     XP_041335912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479978.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="phosphatidate cytidylyltransferase 1"
                     /calculated_mol_wt=52624
     Region          117..416
                     /region_name="CTP_transf_1"
                     /note="Cytidylyltransferase family; cl21502"
                     /db_xref="CDD:451277"
     CDS             1..453
                     /gene="CDS1"
                     /coded_by="XM_041479978.1:1..1362"
                     /db_xref="GeneID:121360262"
ORIGIN      
        1 msarrrrraa teqeeeeeee eeaaaeagsd keedleerlh eldlrsdsdi pdvppptdst
       61 peilkralsg lsarwknwwi rgilslamis gffliiylgs fmlmllvlsi qvkcyheiit
      121 igyrvyhsyd lpwfrslswy fllcvnyffy getvadyfat fvqrreqlqf liryhrfisf
      181 alyltgfcmf vlslvkkhyr lqfymfawth vtllitvtqs hlviqnlfeg miwflvpiss
      241 vicnditayi fgfffgrtpl iklspkktwe gfiggffstv vfgfifsyfl aqhqyfvcpv
      301 eynsetnrfv tecepaelfq mkkysvppll havlgwetvn mypfqmhsfa lstfasligp
      361 fggffasgfk rafkikdfad tipghggimd rfdcqylmat fvhvyitsfi rgpnpskllk
      421 qllvlqpeqq lsvykilksh lvekgilqps lrg
//
LOCUS       XP_041335919             663 aa            linear   VRT 06-MAY-2021
DEFINITION  broad substrate specificity ATP-binding cassette transporter ABCG2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041335919
VERSION     XP_041335919.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479985.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..663
                     /product="broad substrate specificity ATP-binding cassette
                     transporter ABCG2"
                     /calculated_mol_wt=73299
     Region          48..656
                     /region_name="3a01204"
                     /note="The Eye Pigment Precursor Transporter (EPP) Family
                     protein; TIGR00955"
                     /db_xref="CDD:273361"
     CDS             1..663
                     /gene="ABCG2"
                     /coded_by="XM_041479985.1:1..1992"
                     /db_xref="GeneID:121360270"
ORIGIN      
        1 meedqphlci qmsessttgi psrmqslpdl agrvgsvltf hnicyhvktk ngfpsfrknt
       61 kkevlrdvng imkpglnail gptgsgkssl ldilaarkdp cglsgdilin gapqpanfkc
      121 tsgyvvqddv vmgtltvren lkfsaalrlp ksvkeeekne rvnqiikelg lskvadskvg
      181 tqfsrgvsgg erkrtnigme litdpailfl depttgldas tanavlmllk rmskqgrtii
      241 fsihqprysi frlfdtltll aagrvlyhgl aqhaieffqs igyqcepynn padffldvin
      301 gdstavamnk adesntadst eehseydktl aeqlavkysn sayyretkeh lesissgnkk
      361 ktkglfrqit yansflhqlk wvsrrafknl ignpqasiaq lcitaflglv vgtiyfglee
      421 nsaglqnrvg amfflttnqc fssvsalelf vvekkifihe ytsgyyrisv yfiaklladl
      481 ipirtmpsii ftcivyfmlg lkptvgafft mmftlmmvsy tatsmalaia agqnmvavan
      541 llttvafvfm iifsgllvnl tsvmswlswl kyfsiprygm talqinelsg lnfcgssnnt
      601 vlssdsryqq tglvkctgdd ylesqgidas twglwqnhla lacmtliflt iaylklhfmk
      661 kfs
//
LOCUS       XP_041335933             730 aa            linear   VRT 06-MAY-2021
DEFINITION  ovocleidin-116-like [Pyrgilauda ruficollis].
ACCESSION   XP_041335933
VERSION     XP_041335933.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041479999.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="ovocleidin-116-like"
                     /calculated_mol_wt=74989
     Region          <257..>320
                     /region_name="PFM_aerolysin_family"
                     /note="pore-forming module of aerolysin-type beta-barrel
                     pore-forming proteins; cl40431"
                     /db_xref="CDD:394801"
     CDS             1..730
                     /gene="LOC121360277"
                     /coded_by="XM_041479999.1:55..2247"
                     /db_xref="GeneID:121360277"
ORIGIN      
        1 mqtplvclcl cllstalatp vplplpgraa gncvgqhril lkscnakhgf yifkyvysfs
       61 trrnqtqikk eeadqqsiip shrlhegnar qeppagsagt apehsdnsst evieygivik
      121 penhstpgis tdgpsphpgi gmrargsggg mgptpssseg sgdldlvvev dggvpilpqg
      181 erpsevvvgn rsrvrnenkd dgaprvvpvg gamtagrgra pttrgagdeg sgeatvsgqw
      241 qegvkqgtgt ggialssvte kmedvqvdaa gvdeysyvpn sgsvtithgs lgstdradgf
      301 tqvspgkdde vnifigrani hvgeqvttqa gvtesreydg ipsvgsskpf rrldvivsps
      361 gdeddsipar rqperlatta tpahgdrvts slrdgsltge deegdttigd drglvtpvpw
      421 rvtsgditsp tvasihgkdd devrgegqks kgkpdhvatt pshhrgdmea tvtvpakgvs
      481 ihpaategdr ttpfvtassh kagtgpvlgr ggsgevgtat stpsrveaqp gaevrvrpgg
      541 agldktprmd kapfprgkpg gwalsraqtt vggydgdagg rshatkagas papqagqdtg
      601 smaagrgqew grgaesrtav pgagggrlpg hhgrrlgaga pgtiatlgrs rqldqvkrtd
      661 elhvrerafy slggtgggph gpypglgsad ssqssegdrg shsesgqtgl qpsgwgspgy
      721 pqghwiqgpl
//
LOCUS       XP_041335946             903 aa            linear   VRT 06-MAY-2021
DEFINITION  polycystin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335946
VERSION     XP_041335946.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480012.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..903
                     /product="polycystin-2 isoform X1"
                     /calculated_mol_wt=102315
     Region          204..398
                     /region_name="Polycystin_dom"
                     /note="Polycystin domain; pfam20519"
                     /db_xref="CDD:466668"
     Region          400..623
                     /region_name="PKD_channel"
                     /note="Polycystin cation channel; pfam08016"
                     /db_xref="CDD:462341"
     Region          <649..728
                     /region_name="EFh_HEF"
                     /note="EF-hand, calcium binding motif, found in the
                     hexa-EF hand proteins family; cl23634"
                     /db_xref="CDD:355006"
     Region          649..672
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320075"
     Region          690..718
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320075"
     Region          773..804
                     /region_name="Fer4_24"
                     /note="Ferredoxin I 4Fe-4S cluster domain; pfam18109"
                     /db_xref="CDD:436280"
     CDS             1..903
                     /gene="PKD2"
                     /coded_by="XM_041480012.1:15..2726"
                     /db_xref="GeneID:121360285"
ORIGIN      
        1 maggggsrrg reqlelerlg qaartgscpp spplsacsrq awsrdnpgfe peedaaasaa
       61 aagpvlemev ewgsraassl gsgaggpagg grrarrgpmg rggaegpgrl pglpdgaapr
      121 raawakclar rlrglwgtrl meesntsreq ylksilreli tymvflvvlc vltygtvsss
      181 myyytrvmsq lfletpvskt ektdfktlst mddfwkfteg plldglywem wynnktmaen
      241 ksfiyyenll lgvprirqlk vrngscsipe dlkeeikdcy dvysvanedt apfglrngta
      301 wtytnekdln gsshwgliat ysgagyyqdl srtrevtalq iarlkknlwl drgtraafid
      361 fsvynaninl fcvirllvef patgglvtsw hfqpvrlihy istfdfflaa cemsfclfil
      421 yymveevlei rihrlryfrs vwncldilii vlsvvaigis iyrtstvdml lkklledqns
      481 fpnfeplayw qmqfnniaav tvffvwiklf kfvnfnrtms qlsttmsrcv kdvigfaimf
      541 fiiflayaql aylvfgtqid dfstfqdcif tqfriilgdf nfteveeanr ilgpvyfttf
      601 vffmffilln mflaiindty sevksdmaqq kaemelsdli rkgynkamik lklkkttvdd
      661 iseslrqggg klnfdelrqd lkgkghtdae ieaiftkydq dgdqeltehe hqqmrddlek
      721 eredldldrs slprplssrs fprslddsee dededsghss rrrgssssgv syeefqvlmr
      781 rvdrmehsig sivskidavm vkleamerak lkrrdvlgrl ldgvtederl grtseihreq
      841 merlvreele rwesddtasq mshrlgtplg lsgqprsrss rpsssqsdgv dagagnggnn
      901 ihv
//
LOCUS       XP_041335954             811 aa            linear   VRT 06-MAY-2021
DEFINITION  polycystin-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335954
VERSION     XP_041335954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480020.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..811
                     /product="polycystin-2 isoform X2"
                     /calculated_mol_wt=93588
     Region          112..306
                     /region_name="Polycystin_dom"
                     /note="Polycystin domain; pfam20519"
                     /db_xref="CDD:466668"
     Region          308..531
                     /region_name="PKD_channel"
                     /note="Polycystin cation channel; pfam08016"
                     /db_xref="CDD:462341"
     Region          <557..636
                     /region_name="EFh_HEF"
                     /note="EF-hand, calcium binding motif, found in the
                     hexa-EF hand proteins family; cl23634"
                     /db_xref="CDD:355006"
     Region          557..580
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320075"
     Region          598..626
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320075"
     Region          681..712
                     /region_name="Fer4_24"
                     /note="Ferredoxin I 4Fe-4S cluster domain; pfam18109"
                     /db_xref="CDD:436280"
     CDS             1..811
                     /gene="PKD2"
                     /coded_by="XM_041480020.1:1165..3600"
                     /db_xref="GeneID:121360285"
ORIGIN      
        1 msqlknvvae rlqetsntff ffsfmqvegr aslfpsllan kglwgtrlme esntsreqyl
       61 ksilrelity mvflvvlcvl tygtvsssmy yytrvmsqlf letpvsktek tdfktlstmd
      121 dfwkftegpl ldglywemwy nnktmaenks fiyyenlllg vprirqlkvr ngscsipedl
      181 keeikdcydv ysvanedtap fglrngtawt ytnekdlngs shwgliatys gagyyqdlsr
      241 trevtalqia rlkknlwldr gtraafidfs vynaninlfc virllvefpa tgglvtswhf
      301 qpvrlihyis tfdfflaace msfclfilyy mveevleiri hrlryfrsvw ncldiliivl
      361 svvaigisiy rtstvdmllk klledqnsfp nfeplaywqm qfnniaavtv ffvwiklfkf
      421 vnfnrtmsql sttmsrcvkd vigfaimffi iflayaqlay lvfgtqiddf stfqdciftq
      481 friilgdfnf teveeanril gpvyfttfvf fmffillnmf laiindtyse vksdmaqqka
      541 emelsdlirk gynkamiklk lkkttvddis eslrqgggkl nfdelrqdlk gkghtdaeie
      601 aiftkydqdg dqeltehehq qmrddleker edldldrssl prplssrsfp rslddseede
      661 dedsghssrr rgssssgvsy eefqvlmrrv drmehsigsi vskidavmvk leameraklk
      721 rrdvlgrlld gvtederlgr tseihreqme rlvreelerw esddtasqms hrlgtplgls
      781 gqprsrssrp sssqsdgvda gagnggnnih v
//
LOCUS       XP_041335965             787 aa            linear   VRT 06-MAY-2021
DEFINITION  polycystin-2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041335965
VERSION     XP_041335965.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480031.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..787
                     /product="polycystin-2 isoform X3"
                     /calculated_mol_wt=89280
     Region          204..398
                     /region_name="Polycystin_dom"
                     /note="Polycystin domain; pfam20519"
                     /db_xref="CDD:466668"
     Region          400..623
                     /region_name="PKD_channel"
                     /note="Polycystin cation channel; pfam08016"
                     /db_xref="CDD:462341"
     Region          <649..728
                     /region_name="EFh_HEF"
                     /note="EF-hand, calcium binding motif, found in the
                     hexa-EF hand proteins family; cl23634"
                     /db_xref="CDD:355006"
     Region          649..672
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320075"
     Region          690..718
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320075"
     CDS             1..787
                     /gene="PKD2"
                     /coded_by="XM_041480031.1:15..2378"
                     /db_xref="GeneID:121360285"
ORIGIN      
        1 maggggsrrg reqlelerlg qaartgscpp spplsacsrq awsrdnpgfe peedaaasaa
       61 aagpvlemev ewgsraassl gsgaggpagg grrarrgpmg rggaegpgrl pglpdgaapr
      121 raawakclar rlrglwgtrl meesntsreq ylksilreli tymvflvvlc vltygtvsss
      181 myyytrvmsq lfletpvskt ektdfktlst mddfwkfteg plldglywem wynnktmaen
      241 ksfiyyenll lgvprirqlk vrngscsipe dlkeeikdcy dvysvanedt apfglrngta
      301 wtytnekdln gsshwgliat ysgagyyqdl srtrevtalq iarlkknlwl drgtraafid
      361 fsvynaninl fcvirllvef patgglvtsw hfqpvrlihy istfdfflaa cemsfclfil
      421 yymveevlei rihrlryfrs vwncldilii vlsvvaigis iyrtstvdml lkklledqns
      481 fpnfeplayw qmqfnniaav tvffvwiklf kfvnfnrtms qlsttmsrcv kdvigfaimf
      541 fiiflayaql aylvfgtqid dfstfqdcif tqfriilgdf nfteveeanr ilgpvyfttf
      601 vffmffilln mflaiindty sevksdmaqq kaemelsdli rkgynkamik lklkkttvdd
      661 iseslrqggg klnfdelrqd lkgkghtdae ieaiftkydq dgdqeltehe hqqmrddlek
      721 eredldldrs slprplssrs fprslddsee dededsghss rrrgssssgv syeefqvtvl
      781 tgqcpsh
//
LOCUS       XP_041335980            1054 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041335980
VERSION     XP_041335980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1054
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1054
                     /product="helicase POLQ-like isoform X1"
                     /calculated_mol_wt=117454
     Region          280..832
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          280..482
                     /region_name="DEXHc_POLQ-like"
                     /note="DEXH-box helicase domain of DNA polymerase theta;
                     cd18026"
                     /db_xref="CDD:350784"
     Site            order(294,296,301,322..328,424)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350784"
     Site            order(351..352,379,398,400..401,404,434)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350784"
     Region          973..1026
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..1054
                     /gene="HELQ"
                     /coded_by="XM_041480046.1:83..3247"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 maeprlavrr kshssserkr srapaqpvaa sspvarkrps sggegppaea pcsndseedm
       61 fgdydsfygn dsliaqvddi ehkylqdknm dvktageiil gnlqsgvhqk eqdnfsasqn
      121 vvllksdqee gafqvhdsdp adgnqkltes alddlpssql lyfekmdels sasrtsalsk
      181 grdervnsfs dkirdplsfy agaehrnrpt dssshskcil fkpeslkdhl ksamtgnara
      241 qtlqvsktkq lkeavlseei fvarkaiess sldigpfygl pskvkdllrq lrgietlyew
      301 qhdclmlesl qqrknliysl ptgggktlva eiiilqellc rqkdvlmilp yvaivqekvr
      361 glssfgielg flveeyagsk grfppirrrv kkslyiatie kghalvnsli eterindlgl
      421 vvvdelhmlg agsrgavlei tlakllytsk ktqiigmsat lnnvgdlqkf lqaeyytnnf
      481 rpvelkeyik irdtiyavds ktqngfafsr llnfkyssnl ekadpdhiia lvtevipkys
      541 clifcptkkn cenvasmvck ylkkefrvhk ekekedlikn lksigngtfc pvlkqtipfg
      601 iayhhsgltn derksieeay sagvlcvlac tatlaagvnl parrvilrap yvgndflkkn
      661 qykqmagrag ragidsages ilivqekdkh lvqdlvhspl encysnllqe ltkgiqslll
      721 slvglkvavt heevdnfmcc tllgvqqqll skekslteiv kdglenliek gllkgrisqk
      781 dhnskstlti tplgkatykg sidlaycnil yrdlkkgleg lvlesnlhll ylstpydmts
      841 tcspdwmiyl rqfnqlsaae qkvadivgvp esfitkkasg qairknmdda vvnrfyltfv
      901 lyallketni wsvsekfnls rgyvqnllss aasfascllh fceeieefwv ykallieltk
      961 qltycvktel iplmevagvl earakqlyna gyktlahlan anpetlvrmi ehlsrrqakq
     1021 iissakmlls ekaealqeev eellkvptdi pgth
//
LOCUS       XP_041335988            1033 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041335988
VERSION     XP_041335988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480054.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1033
                     /product="helicase POLQ-like isoform X2"
                     /calculated_mol_wt=115337
     Region          259..811
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          259..461
                     /region_name="DEXHc_POLQ-like"
                     /note="DEXH-box helicase domain of DNA polymerase theta;
                     cd18026"
                     /db_xref="CDD:350784"
     Site            order(273,275,280,301..307,403)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350784"
     Site            order(330..331,358,377,379..380,383,413)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350784"
     Region          952..1005
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..1033
                     /gene="HELQ"
                     /coded_by="XM_041480054.1:143..3244"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 mvgswgcwrg ggapsarmvc vgegrtlyer csndseedmf gdydsfygnd sliaqvddie
       61 hkylqdknmd vktageiilg nlqsgvhqke qdnfsasqnv vllksdqeeg afqvhdsdpa
      121 dgnqkltesa lddlpssqll yfekmdelss asrtsalskg rdervnsfsd kirdplsfya
      181 gaehrnrptd ssshskcilf kpeslkdhlk samtgnaraq tlqvsktkql keavlseeif
      241 varkaiesss ldigpfyglp skvkdllrql rgietlyewq hdclmleslq qrknliyslp
      301 tgggktlvae iiilqellcr qkdvlmilpy vaivqekvrg lssfgielgf lveeyagskg
      361 rfppirrrvk kslyiatiek ghalvnslie terindlglv vvdelhmlga gsrgavleit
      421 lakllytskk tqiigmsatl nnvgdlqkfl qaeyytnnfr pvelkeyiki rdtiyavdsk
      481 tqngfafsrl lnfkyssnle kadpdhiial vtevipkysc lifcptkknc envasmvcky
      541 lkkefrvhke kekedliknl ksigngtfcp vlkqtipfgi ayhhsgltnd erksieeays
      601 agvlcvlact atlaagvnlp arrvilrapy vgndflkknq ykqmagragr agidsagesi
      661 livqekdkhl vqdlvhsple ncysnllqel tkgiqsllls lvglkvavth eevdnfmcct
      721 llgvqqqlls kekslteivk dglenliekg llkgrisqkd hnskstltit plgkatykgs
      781 idlaycnily rdlkkglegl vlesnlhlly lstpydmtst cspdwmiylr qfnqlsaaeq
      841 kvadivgvpe sfitkkasgq airknmddav vnrfyltfvl yallketniw svsekfnlsr
      901 gyvqnllssa asfascllhf ceeieefwvy kallieltkq ltycvkteli plmevagvle
      961 arakqlynag yktlahlana npetlvrmie hlsrrqakqi issakmllse kaealqeeve
     1021 ellkvptdip gth
//
LOCUS       XP_041335997            1021 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041335997
VERSION     XP_041335997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480063.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1021
                     /product="helicase POLQ-like isoform X3"
                     /calculated_mol_wt=113974
     Region          247..799
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          247..449
                     /region_name="DEXHc_POLQ-like"
                     /note="DEXH-box helicase domain of DNA polymerase theta;
                     cd18026"
                     /db_xref="CDD:350784"
     Site            order(261,263,268,289..295,391)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350784"
     Site            order(318..319,346,365,367..368,371,401)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350784"
     Region          940..993
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..1021
                     /gene="HELQ"
                     /coded_by="XM_041480063.1:143..3208"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 mvgswgcwrg ggapsarmcs ndseedmfgd ydsfygndsl iaqvddiehk ylqdknmdvk
       61 tageiilgnl qsgvhqkeqd nfsasqnvvl lksdqeegaf qvhdsdpadg nqkltesald
      121 dlpssqllyf ekmdelssas rtsalskgrd ervnsfsdki rdplsfyaga ehrnrptdss
      181 shskcilfkp eslkdhlksa mtgnaraqtl qvsktkqlke avlseeifva rkaiesssld
      241 igpfyglpsk vkdllrqlrg ietlyewqhd clmleslqqr knliyslptg ggktlvaeii
      301 ilqellcrqk dvlmilpyva ivqekvrgls sfgielgflv eeyagskgrf ppirrrvkks
      361 lyiatiekgh alvnsliete rindlglvvv delhmlgags rgavleitla kllytskktq
      421 iigmsatlnn vgdlqkflqa eyytnnfrpv elkeyikird tiyavdsktq ngfafsrlln
      481 fkyssnleka dpdhiialvt evipkyscli fcptkkncen vasmvckylk kefrvhkeke
      541 kedliknlks igngtfcpvl kqtipfgiay hhsgltnder ksieeaysag vlcvlactat
      601 laagvnlpar rvilrapyvg ndflkknqyk qmagragrag idsagesili vqekdkhlvq
      661 dlvhsplenc ysnllqeltk giqslllslv glkvavthee vdnfmcctll gvqqqllske
      721 kslteivkdg lenliekgll kgrisqkdhn skstltitpl gkatykgsid laycnilyrd
      781 lkkgleglvl esnlhllyls tpydmtstcs pdwmiylrqf nqlsaaeqkv adivgvpesf
      841 itkkasgqai rknmddavvn rfyltfvlya llketniwsv sekfnlsrgy vqnllssaas
      901 fascllhfce eieefwvyka llieltkqlt ycvktelipl mevagvlear akqlynagyk
      961 tlahlananp etlvrmiehl srrqakqiis sakmllseka ealqeeveel lkvptdipgt
     1021 h
//
LOCUS       XP_041336004            1021 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041336004
VERSION     XP_041336004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480070.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1021
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1021
                     /product="helicase POLQ-like isoform X4"
                     /calculated_mol_wt=113940
     Region          280..832
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          280..482
                     /region_name="DEXHc_POLQ-like"
                     /note="DEXH-box helicase domain of DNA polymerase theta;
                     cd18026"
                     /db_xref="CDD:350784"
     Site            order(294,296,301,322..328,424)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350784"
     Site            order(351..352,379,398,400..401,404,434)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350784"
     Region          940..993
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..1021
                     /gene="HELQ"
                     /coded_by="XM_041480070.1:83..3148"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 maeprlavrr kshssserkr srapaqpvaa sspvarkrps sggegppaea pcsndseedm
       61 fgdydsfygn dsliaqvddi ehkylqdknm dvktageiil gnlqsgvhqk eqdnfsasqn
      121 vvllksdqee gafqvhdsdp adgnqkltes alddlpssql lyfekmdels sasrtsalsk
      181 grdervnsfs dkirdplsfy agaehrnrpt dssshskcil fkpeslkdhl ksamtgnara
      241 qtlqvsktkq lkeavlseei fvarkaiess sldigpfygl pskvkdllrq lrgietlyew
      301 qhdclmlesl qqrknliysl ptgggktlva eiiilqellc rqkdvlmilp yvaivqekvr
      361 glssfgielg flveeyagsk grfppirrrv kkslyiatie kghalvnsli eterindlgl
      421 vvvdelhmlg agsrgavlei tlakllytsk ktqiigmsat lnnvgdlqkf lqaeyytnnf
      481 rpvelkeyik irdtiyavds ktqngfafsr llnfkyssnl ekadpdhiia lvtevipkys
      541 clifcptkkn cenvasmvck ylkkefrvhk ekekedlikn lksigngtfc pvlkqtipfg
      601 iayhhsgltn derksieeay sagvlcvlac tatlaagvnl parrvilrap yvgndflkkn
      661 qykqmagrag ragidsages ilivqekdkh lvqdlvhspl encysnllqe ltkgiqslll
      721 slvglkvavt heevdnfmcc tllgvqqqll skekslteiv kdglenliek gllkgrisqk
      781 dhnskstlti tplgkatykg sidlaycnil yrdlkkgleg lvlesnlhll ylstpydmts
      841 tcspdwmiyl rqnmddavvn rfyltfvlya llketniwsv sekfnlsrgy vqnllssaas
      901 fascllhfce eieefwvyka llieltkqlt ycvktelipl mevagvlear akqlynagyk
      961 tlahlananp etlvrmiehl srrqakqiis sakmllseka ealqeeveel lkvptdipgt
     1021 h
//
LOCUS       XP_041336012             987 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041336012
VERSION     XP_041336012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..987
                     /product="helicase POLQ-like isoform X5"
                     /calculated_mol_wt=110015
     Region          280..765
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          906..959
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..987
                     /gene="HELQ"
                     /coded_by="XM_041480078.1:83..3046"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 maeprlavrr kshssserkr srapaqpvaa sspvarkrps sggegppaea pcsndseedm
       61 fgdydsfygn dsliaqvddi ehkylqdknm dvktageiil gnlqsgvhqk eqdnfsasqn
      121 vvllksdqee gafqvhdsdp adgnqkltes alddlpssql lyfekmdels sasrtsalsk
      181 grdervnsfs dkirdplsfy agaehrnrpt dssshskcil fkpeslkdhl ksamtgnara
      241 qtlqvsktkq lkeavlseei fvarkaiess sldigpfygl pskvkdllrq lrgietlyew
      301 qhdclmlesl qqrknliysl ptgggktlva eiiilqellc rqkdvlmilp yvaivqeklh
      361 mlgagsrgav leitlaklly tskktqiigm satlnnvgdl qkflqaeyyt nnfrpvelke
      421 yikirdtiya vdsktqngfa fsrllnfkys snlekadpdh iialvtevip kysclifcpt
      481 kkncenvasm vckylkkefr vhkekekedl iknlksigng tfcpvlkqti pfgiayhhsg
      541 ltnderksie eaysagvlcv lactatlaag vnlparrvil rapyvgndfl kknqykqmag
      601 ragragidsa gesilivqek dkhlvqdlvh splencysnl lqeltkgiqs lllslvglkv
      661 avtheevdnf mcctllgvqq qllskekslt eivkdglenl iekgllkgri sqkdhnskst
      721 ltitplgkat ykgsidlayc nilyrdlkkg leglvlesnl hllylstpyd mtstcspdwm
      781 iylrqfnqls aaeqkvadiv gvpesfitkk asgqairknm ddavvnrfyl tfvlyallke
      841 tniwsvsekf nlsrgyvqnl lssaasfasc llhfceeiee fwvykallie ltkqltycvk
      901 teliplmeva gvlearakql ynagyktlah lananpetlv rmiehlsrrq akqiissakm
      961 llsekaealq eeveellkvp tdipgth
//
LOCUS       XP_041336019             974 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041336019
VERSION     XP_041336019.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480085.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..974
                     /product="helicase POLQ-like isoform X6"
                     /calculated_mol_wt=108702
     Region          280..752
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          280..482
                     /region_name="DEXHc_POLQ-like"
                     /note="DEXH-box helicase domain of DNA polymerase theta;
                     cd18026"
                     /db_xref="CDD:350784"
     Site            order(294,296,301,322..328,424)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350784"
     Site            order(351..352,379,398,400..401,404,434)
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:350784"
     Region          893..946
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..974
                     /gene="HELQ"
                     /coded_by="XM_041480085.1:83..3007"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 maeprlavrr kshssserkr srapaqpvaa sspvarkrps sggegppaea pcsndseedm
       61 fgdydsfygn dsliaqvddi ehkylqdknm dvktageiil gnlqsgvhqk eqdnfsasqn
      121 vvllksdqee gafqvhdsdp adgnqkltes alddlpssql lyfekmdels sasrtsalsk
      181 grdervnsfs dkirdplsfy agaehrnrpt dssshskcil fkpeslkdhl ksamtgnara
      241 qtlqvsktkq lkeavlseei fvarkaiess sldigpfygl pskvkdllrq lrgietlyew
      301 qhdclmlesl qqrknliysl ptgggktlva eiiilqellc rqkdvlmilp yvaivqekvr
      361 glssfgielg flveeyagsk grfppirrrv kkslyiatie kghalvnsli eterindlgl
      421 vvvdelhmlg agsrgavlei tlakllytsk ktqiigmsat lnnvgdlqkf lqaeyytnnf
      481 rpvelkeyik irdtiyavds ktqngfafsr llnfkyssnl ekadpdhiia lvtevipkys
      541 clifcptkkn cenvasmvck ylkkvilrap yvgndflkkn qykqmagrag ragidsages
      601 ilivqekdkh lvqdlvhspl encysnllqe ltkgiqslll slvglkvavt heevdnfmcc
      661 tllgvqqqll skekslteiv kdglenliek gllkgrisqk dhnskstlti tplgkatykg
      721 sidlaycnil yrdlkkgleg lvlesnlhll ylstpydmts tcspdwmiyl rqfnqlsaae
      781 qkvadivgvp esfitkkasg qairknmdda vvnrfyltfv lyallketni wsvsekfnls
      841 rgyvqnllss aasfascllh fceeieefwv ykallieltk qltycvktel iplmevagvl
      901 earakqlyna gyktlahlan anpetlvrmi ehlsrrqakq iissakmlls ekaealqeev
      961 eellkvptdi pgth
//
LOCUS       XP_041336026             827 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041336026
VERSION     XP_041336026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..827
                     /product="helicase POLQ-like isoform X7"
                     /calculated_mol_wt=91906
     Region          83..605
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          746..799
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..827
                     /gene="HELQ"
                     /coded_by="XM_041480092.1:83..2566"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 maeprlavrr kshssserkr srapaqpvaa sspvarkrps sggegppaea pvgdggilgl
       61 larrgssvce dewqhdclml eslqqrknli yslptgggkt lvaeiiilqe llcrqkdvlm
      121 ilpyvaivqe kvrglssfgi elgflveeya gskgrfppir rrvkkslyia tiekghalvn
      181 slieterind lglvvvdelh mlgagsrgav leitlaklly tskktqiigm satlnnvgdl
      241 qkflqaeyyt nnfrpvelke yikirdtiya vdsktqngfa fsrllnfkys snlekadpdh
      301 iialvtevip kysclifcpt kkncenvasm vckylkkefr vhkekekedl iknlksigng
      361 tfcpvlkqti pfgiayhhsg ltnderksie eaysagvlcv lactatlaag vnlparrvil
      421 rapyvgndfl kknqykqmag ragragidsa gesilivqek dkhlvqdlvh splencysnl
      481 lqeltkgiqs lllslvglkv avtheevdnf mcctllgvqq qllskekslt eivkdglenl
      541 iekgllkgri sqkdhnskst ltitplgkat ykgsidlayc nilyrdlkkg leglvlesnl
      601 hllylstpyd mtstcspdwm iylrqfnqls aaeqkvadiv gvpesfitkk asgqairknm
      661 ddavvnrfyl tfvlyallke tniwsvsekf nlsrgyvqnl lssaasfasc llhfceeiee
      721 fwvykallie ltkqltycvk teliplmeva gvlearakql ynagyktlah lananpetlv
      781 rmiehlsrrq akqiissakm llsekaealq eeveellkvp tdipgth
//
LOCUS       XP_041336035             627 aa            linear   VRT 06-MAY-2021
DEFINITION  helicase POLQ-like isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041336035
VERSION     XP_041336035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="helicase POLQ-like isoform X8"
                     /calculated_mol_wt=70025
     Region          <1..405
                     /region_name="BRR2"
                     /note="Replicative superfamily II helicase [Replication,
                     recombination and repair]; COG1204"
                     /db_xref="CDD:440817"
     Region          546..599
                     /region_name="HHH_5"
                     /note="Helix-hairpin-helix domain; pfam14520"
                     /db_xref="CDD:434010"
     CDS             1..627
                     /gene="HELQ"
                     /coded_by="XM_041480101.1:523..2406"
                     /db_xref="GeneID:121360293"
ORIGIN      
        1 mlgagsrgav leitlaklly tskktqiigm satlnnvgdl qkflqaeyyt nnfrpvelke
       61 yikirdtiya vdsktqngfa fsrllnfkys snlekadpdh iialvtevip kysclifcpt
      121 kkncenvasm vckylkkefr vhkekekedl iknlksigng tfcpvlkqti pfgiayhhsg
      181 ltnderksie eaysagvlcv lactatlaag vnlparrvil rapyvgndfl kknqykqmag
      241 ragragidsa gesilivqek dkhlvqdlvh splencysnl lqeltkgiqs lllslvglkv
      301 avtheevdnf mcctllgvqq qllskekslt eivkdglenl iekgllkgri sqkdhnskst
      361 ltitplgkat ykgsidlayc nilyrdlkkg leglvlesnl hllylstpyd mtstcspdwm
      421 iylrqfnqls aaeqkvadiv gvpesfitkk asgqairknm ddavvnrfyl tfvlyallke
      481 tniwsvsekf nlsrgyvqnl lssaasfasc llhfceeiee fwvykallie ltkqltycvk
      541 teliplmeva gvlearakql ynagyktlah lananpetlv rmiehlsrrq akqiissakm
      601 llsekaealq eeveellkvp tdipgth
//
LOCUS       XP_041336047             405 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA1-A complex subunit Abraxas 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336047
VERSION     XP_041336047.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480113.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="BRCA1-A complex subunit Abraxas 1 isoform X1"
                     /calculated_mol_wt=45965
     Region          2..375
                     /region_name="Abraxas_1"
                     /note="BRCA1-A complex subunit Abraxas 1; cd23523"
                     /db_xref="CDD:467803"
     Site            order(11..13,15..17,19..20,23..28,45..47,49,62..66,68..71,
                     76,87,91,101,103..109,111..114,116,139..140,144..152,
                     163..165,168..177,179..184,186,188..191,195,199,202..203,
                     207..209,211..213,215..216,218..219,222..223,225..227,
                     229..230,233..234,236..241,243..244,246..247,250..251,
                     253..254,257,274..276,278..279,282..283,286..287,292,
                     295..305,319..323,325..327)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467803"
     Site            170
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467803"
     CDS             1..405
                     /gene="ABRAXAS1"
                     /coded_by="XM_041480113.1:22..1239"
                     /db_xref="GeneID:121360337"
ORIGIN      
        1 megestsall sgfvfgalaf qhlstdsdte gfllgdvkge aknsitdsqm ddvevvytid
       61 iqkhipcyql fsfynsagel nelalkkils gckksvigwy kfrrntdqtm tfretvlhkn
      121 lqshlsnqgl vfllltssvm tescstyrle halhrpqegl fqkvplvvtn lgmaeqqgyr
      181 tvsgscvssg fvramrqhrt effhedgslq evhkinemya tlqeelkkic itvdvsersv
      241 ekllaevsql keeikrkkqq ncpgedknhp aepkenvllc qalqtffpns rlqtcivslk
      301 gqqisknccn tdhhinvmdk ltlmveerdf tegetrhlnk rkvrgttavs ksfkksrslq
      361 lhqeppqnqe dsdqerkltl sstetdedvf eksrdakeyp hsptf
//
LOCUS       XP_041336056             369 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA1-A complex subunit Abraxas 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336056
VERSION     XP_041336056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480122.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="BRCA1-A complex subunit Abraxas 1 isoform X2"
                     /calculated_mol_wt=41908
     Region          2..339
                     /region_name="Abraxas-like_domain"
                     /note="Abraxas-like domain of BRCA1-A complex subunit
                     Abraxas 1, BRISC complex subunit Abraxas 2, and similar
                     domains found in insects and plants; cl49623"
                     /db_xref="CDD:483963"
     Site            order(11,13,15..17,19..20,23..25,28,30,32,34..35,51,55,65,
                     67..73,75..78,80,103,109..116,128..129,132,134..141,
                     143..148,150,153..155,159,175..176,179..180,182..183,
                     186..187,189..191,193..194,197..198,200..205,207..208,
                     210..211,214..215,217..218,221)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467802"
     Site            134
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467802"
     CDS             1..369
                     /gene="ABRAXAS1"
                     /coded_by="XM_041480122.1:18..1127"
                     /db_xref="GeneID:121360337"
ORIGIN      
        1 megestsall sgfvfgalaf qhlstdsdtt yrsifhatsc sgelnelalk kilsgckksv
       61 igwykfrrnt dqtmtfretv lhknlqshls nqglvflllt ssvmtescst yrlehalhrp
      121 qeglfqkvpl vvtnlgmaeq qgyrtvsgsc vssgfvramr qhrteffhed gslqevhkin
      181 emyatlqeel kkicitvdvs ersvekllae vsqlkeeikr kkqqncpged knhpaepken
      241 vllcqalqtf fpnsrlqtci vslkgqqisk nccntdhhin vmdkltlmve erdftegetr
      301 hlnkrkvrgt tavsksfkks rslqlhqepp qnqedsdqer kltlsstetd edvfeksrda
      361 keyphsptf
//
LOCUS       XP_041336065             349 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA1-A complex subunit Abraxas 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336065
VERSION     XP_041336065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..349
                     /product="BRCA1-A complex subunit Abraxas 1 isoform X3"
                     /calculated_mol_wt=39999
     Region          21..319
                     /region_name="Abraxas-like_domain"
                     /note="Abraxas-like domain of BRCA1-A complex subunit
                     Abraxas 1, BRISC complex subunit Abraxas 2, and similar
                     domains found in insects and plants; cl49623"
                     /db_xref="CDD:483963"
     Site            order(31,35,45,47..53,55..58,60,83,89..96,108..109,112,
                     114..121,123..128,130,133..135,139,155..156,159..160,
                     162..163,166..167,169..171,173..174,177..178,180..185,
                     187..188,190..191,194..195,197..198,201)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467802"
     Site            114
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467802"
     CDS             1..349
                     /gene="ABRAXAS1"
                     /coded_by="XM_041480131.1:179..1228"
                     /db_xref="GeneID:121360337"
ORIGIN      
        1 mmlklfiqst yrsifhatsc sgelnelalk kilsgckksv igwykfrrnt dqtmtfretv
       61 lhknlqshls nqglvflllt ssvmtescst yrlehalhrp qeglfqkvpl vvtnlgmaeq
      121 qgyrtvsgsc vssgfvramr qhrteffhed gslqevhkin emyatlqeel kkicitvdvs
      181 ersvekllae vsqlkeeikr kkqqncpged knhpaepken vllcqalqtf fpnsrlqtci
      241 vslkgqqisk nccntdhhin vmdkltlmve erdftegetr hlnkrkvrgt tavsksfkks
      301 rslqlhqepp qnqedsdqer kltlsstetd edvfeksrda keyphsptf
//
LOCUS       XP_041336073             312 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA1-A complex subunit Abraxas 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336073
VERSION     XP_041336073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480139.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="BRCA1-A complex subunit Abraxas 1 isoform X4"
                     /calculated_mol_wt=35250
     Region          2..282
                     /region_name="Abraxas-like_domain"
                     /note="Abraxas-like domain of BRCA1-A complex subunit
                     Abraxas 1, BRISC complex subunit Abraxas 2, and similar
                     domains found in insects and plants; cl49623"
                     /db_xref="CDD:483963"
     CDS             1..312
                     /gene="ABRAXAS1"
                     /coded_by="XM_041480139.1:18..956"
                     /db_xref="GeneID:121360337"
ORIGIN      
        1 megestsall sgfvfgalaf qhlstdsdte gfllgdvkge aknsitdsqm ddvevvytid
       61 iqkhipcyql fsfynsagel nelalkkils gckktfpesp fggyqlghgr tarlqnsvrf
      121 lcifwfcesh ettqkicitv dvsersvekl laevsqlkee ikrkkqqncp gedknhpaep
      181 kenvllcqal qtffpnsrlq tcivslkgqq isknccntdh hinvmdkltl mveerdfteg
      241 etrhlnkrkv rgttavsksf kksrslqlhq eppqnqedsd qerkltlsst etdedvfeks
      301 rdakeyphsp tf
//
LOCUS       XP_041336081             296 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA1-A complex subunit Abraxas 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336081
VERSION     XP_041336081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="BRCA1-A complex subunit Abraxas 1 isoform X5"
                     /calculated_mol_wt=33872
     Region          <1..266
                     /region_name="Abraxas-like_domain"
                     /note="Abraxas-like domain of BRCA1-A complex subunit
                     Abraxas 1, BRISC complex subunit Abraxas 2, and similar
                     domains found in insects and plants; cl49623"
                     /db_xref="CDD:483963"
     Site            61
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467802"
     CDS             1..296
                     /gene="ABRAXAS1"
                     /coded_by="XM_041480147.1:236..1126"
                     /db_xref="GeneID:121360337"
ORIGIN      
        1 mtfretvlhk nlqshlsnqg lvfllltssv mtescstyrl ehalhrpqeg lfqkvplvvt
       61 nlgmaeqqgy rtvsgscvss gfvramrqhr teffhedgsl qevhkinemy atlqeelkki
      121 citvdvsers vekllaevsq lkeeikrkkq qncpgedknh paepkenvll cqalqtffpn
      181 srlqtcivsl kgqqiskncc ntdhhinvmd kltlmveerd ftegetrhln krkvrgttav
      241 sksfkksrsl qlhqeppqnq edsdqerklt lsstetdedv feksrdakey phsptf
//
LOCUS       XP_041336088             296 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA1-A complex subunit Abraxas 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336088
VERSION     XP_041336088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="BRCA1-A complex subunit Abraxas 1 isoform X5"
                     /calculated_mol_wt=33872
     Region          <1..266
                     /region_name="Abraxas-like_domain"
                     /note="Abraxas-like domain of BRCA1-A complex subunit
                     Abraxas 1, BRISC complex subunit Abraxas 2, and similar
                     domains found in insects and plants; cl49623"
                     /db_xref="CDD:483963"
     Site            61
                     /site_type="active"
                     /note="BRCC36 activation site [active]"
                     /db_xref="CDD:467802"
     CDS             1..296
                     /gene="ABRAXAS1"
                     /coded_by="XM_041480154.1:234..1124"
                     /db_xref="GeneID:121360337"
ORIGIN      
        1 mtfretvlhk nlqshlsnqg lvfllltssv mtescstyrl ehalhrpqeg lfqkvplvvt
       61 nlgmaeqqgy rtvsgscvss gfvramrqhr teffhedgsl qevhkinemy atlqeelkki
      121 citvdvsers vekllaevsq lkeeikrkkq qncpgedknh paepkenvll cqalqtffpn
      181 srlqtcivsl kgqqiskncc ntdhhinvmd kltlmveerd ftegetrhln krkvrgttav
      241 sksfkksrsl qlhqeppqnq edsdqerklt lsstetdedv feksrdakey phsptf
//
LOCUS       XP_041336099             134 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S18c, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041336099
VERSION     XP_041336099.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480165.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..134
                     /product="28S ribosomal protein S18c, mitochondrial"
                     /calculated_mol_wt=15334
     Region          62..112
                     /region_name="Ribosomal_S18"
                     /note="Ribosomal protein S18; pfam01084"
                     /db_xref="CDD:460054"
     CDS             1..134
                     /gene="MRPS18C"
                     /coded_by="XM_041480165.1:20..424"
                     /db_xref="GeneID:121360376"
ORIGIN      
        1 mvaramaahg rwprlalakl wtrpcrlqhe gqperqpgrs dqpiqmenpy kdppkrcvlc
       61 ginvdyknvq llsqfvspyt gsiygrhitg lcnkkqkeit kaikrahvfg fmpvmfknpq
      121 fltdpklcni kype
//
LOCUS       XP_041336109             445 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336109
VERSION     XP_041336109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="glycerol-3-phosphate acyltransferase 3 isoform
                     X1"
                     /calculated_mol_wt=49769
     Region          202..410
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(231,234,236,250..253,306..308)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..445
                     /gene="LOC121360384"
                     /coded_by="XM_041480175.1:72..1409"
                     /db_xref="GeneID:121360384"
ORIGIN      
        1 mevvwavgql gavwvavvlg livlpsalgi slgiseaymw vlvktlewat irlqkgakkp
       61 qpqvprtata ngiierdetp lekeiallhr adfefshify fcrkgfeaiv edevtqrfss
      121 eellswnllt rtnvnfhyis lrltvvwvig vvvrycfllp lrfslaaigi tsmivgttvv
      181 gqlpngsvkn ylsevvhltc srilvralsg tihyhnkenr pqkggicvan htspidaiil
      241 tndgcyamvg qvhgglmgii qratvkacph vwferseikd rhlvtkrlre hvadksklpi
      301 lifpegtcin ntsvmmfkkg sfeiggtiyp vaikydpqfg dafwnsskyn ivsyllrimt
      361 swaivcnvwy lppmlrkede davqfanrvr saiarqgglt elpwdgglkr akvkdtfkee
      421 qqknyskmlv rngsvgslsa etesd
//
LOCUS       XP_041336117             273 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336117
VERSION     XP_041336117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="glycerol-3-phosphate acyltransferase 3 isoform
                     X2"
                     /calculated_mol_wt=30369
     Region          30..238
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(59,62,64,78..81,134..136)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..273
                     /gene="LOC121360384"
                     /coded_by="XM_041480183.1:327..1148"
                     /db_xref="GeneID:121360384"
ORIGIN      
        1 mivgttvvgq lpngsvknyl sevvhltcsr ilvralsgti hyhnkenrpq kggicvanht
       61 spidaiiltn dgcyamvgqv hgglmgiiqr atvkacphvw ferseikdrh lvtkrlrehv
      121 adksklpili fpegtcinnt svmmfkkgsf eiggtiypva ikydpqfgda fwnsskyniv
      181 syllrimtsw aivcnvwylp pmlrkededa vqfanrvrsa iarqggltel pwdgglkrak
      241 vkdtfkeeqq knyskmlvrn gsvgslsaet esd
//
LOCUS       XP_041336131             344 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Nkx-6.1 [Pyrgilauda ruficollis].
ACCESSION   XP_041336131
VERSION     XP_041336131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480197.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="homeobox protein Nkx-6.1"
                     /calculated_mol_wt=35553
     Region          215..273
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..344
                     /gene="NKX6-1"
                     /coded_by="XM_041480197.1:52..1086"
                     /db_xref="GeneID:121360394"
ORIGIN      
        1 mlalgqmdga prqgafllgs pplaalhsma emkaplypay plpagpasss sasaspssas
       61 pspplgspgl kapaasaaaa gglsalgtap pqlsaatphg indilsrpsm plpgaalasa
      121 spssssaapa gllaglprfg slsppppppp alyfspgaaa aaaavaagry pkplaelpgr
      181 tpifwpgvmq sppwrdarla caphqgsill dkdgkrkhtr ptfsgqqifa lektfeqtky
      241 lagperarla yslgmtesqv kvwfqnrrtk wrkkhaaema takkkqdset erlkgtsene
      301 eedddynkpl dpnsddekit qllkkhkpgg gglllhppeg easv
//
LOCUS       XP_041336146             262 aa            linear   VRT 06-MAY-2021
DEFINITION  placenta-specific gene 8 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041336146
VERSION     XP_041336146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480212.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="placenta-specific gene 8 protein"
                     /calculated_mol_wt=28527
     Region          25..107
                     /region_name="PLAC8"
                     /note="PLAC8 family; cl04722"
                     /db_xref="CDD:471097"
     Region          170..254
                     /region_name="PLAC8"
                     /note="PLAC8 family; cl04722"
                     /db_xref="CDD:471097"
     CDS             1..262
                     /gene="PLAC8"
                     /coded_by="XM_041480212.1:105..893"
                     /db_xref="GeneID:121360400"
ORIGIN      
        1 maaptvvtiq pqyggamssv srctwqtglm dccsdcgvcc cgtfcfpcla cqlagdmnec
       61 clcgtsvamr tlyrtrynip gsicsdycit lwctvcsvcq mkrdvnrrre lgifcslskm
      121 ptseipaasa sdgfsfqttn clegpepvla masqtvitvq pqfsaarqpg ewqtglldcc
      181 sdcgiclcgm ffffclncqv agdmdecclc gssvamrtly rtkynipgsi lsdfcaiwcc
      241 spcalcqlkr dinrrramgi fw
//
LOCUS       XP_041336157             302 aa            linear   VRT 06-MAY-2021
DEFINITION  osteopontin [Pyrgilauda ruficollis].
ACCESSION   XP_041336157
VERSION     XP_041336157.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480223.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="osteopontin"
                     /calculated_mol_wt=33716
     Region          24..301
                     /region_name="OSTEO"
                     /note="Osteopontin; smart00017"
                     /db_xref="CDD:214472"
     CDS             1..302
                     /gene="SPP1"
                     /coded_by="XM_041480223.1:135..1043"
                     /db_xref="GeneID:121360406"
ORIGIN      
        1 mkvavlclcl isitaawpvi qskqhaisas skekydsrgh hlhryhndhv nsqsqesqqh
       61 pqsdlassqq tlysseesvd vpeqlhfpdv srkshedvdd ddddndsndt neseevvtsf
      121 ptdipitepf ptfpftrgdn agrgdsvayr mranaallks ikrhkatkkl iydateedes
      181 dmdadsqrsv srddsasrrs lrkhassvvw sdqssepdsd phdrslends rpksdsheae
      241 gdrdshssve srergdshln aesresrdrv saqlsddiss qtlesaedsq drhsiesnev
      301 tl
//
LOCUS       XP_041336168             446 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336168
VERSION     XP_041336168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480234.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X1"
                     /calculated_mol_wt=50047
     Region          212..415
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(236,239,241,255..258,311..313)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..446
                     /gene="LOC121360414"
                     /coded_by="XM_041480234.1:135..1475"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 meenreghgl aegkilsiwi ilfvalillp sifrvslgis hfyvkivikm lewatlqiee
       61 gvkkqkamal enlistgiiq rdetpmekev vgwcrgcfgl advmyfskkg ceavaedevt
      121 hrfsseells wnllsrtnan lhhvswklaa vwvtgiliry clllpfricl svfsilllvl
      181 attvvgrfpn grvkgwlsnq vqmicatlgv rclsglvhfh nrenkpqegg icvanhtspl
      241 dvlilasdgc yslvgqvhgg lmgliqkscm qtsqhvlfer semkdrhlvr kkirehiadk
      301 aklpilifpe gtcinntsvm mfkkgsfevg gtihpvaiky dprfgdafwn stkhsmmtya
      361 fnvltswaiv cnvwylppmv keeeedavhf anrvkaviaa ragmsvlpwd gglkrkkvke
      421 sfkeeqqkky cqiviengsv gnrnvc
//
LOCUS       XP_041336175             439 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336175
VERSION     XP_041336175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480241.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..439
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X2"
                     /calculated_mol_wt=49297
     Region          205..408
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(229,232,234,248..251,304..306)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..439
                     /gene="LOC121360414"
                     /coded_by="XM_041480241.1:135..1454"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 meenreghgl aegkilsiwi ilfvalillp sifrvslgis hfyvkivikm lewatlqiee
       61 gvkkqkamal enlistgiiq rdetpmekev vgwcrgcfgl advmyfskkg ceavaedevt
      121 hrfsseells wnllsrtnan lhhvswklaa vwvtgiliry clllpfrill lvlattvvgr
      181 fpngrvkgwl snqvqmicat lgvrclsglv hfhnrenkpq eggicvanht spldvlilas
      241 dgcyslvgqv hgglmgliqk scmqtsqhvl fersemkdrh lvrkkirehi adkaklpili
      301 fpegtcinnt svmmfkkgsf evggtihpva ikydprfgda fwnstkhsmm tyafnvltsw
      361 aivcnvwylp pmvkeeeeda vhfanrvkav iaaragmsvl pwdgglkrkk vkesfkeeqq
      421 kkycqivien gsvgnrnvc
//
LOCUS       XP_041336183             435 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336183
VERSION     XP_041336183.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480249.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..435
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X3"
                     /calculated_mol_wt=48974
     Region          212..404
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(236,239,241,255..258,311..313)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..435
                     /gene="LOC121360414"
                     /coded_by="XM_041480249.1:135..1442"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 meenreghgl aegkilsiwi ilfvalillp sifrvslgis hfyvkivikm lewatlqiee
       61 gvkkqkamal enlistgiiq rdetpmekev vgwcrgcfgl advmyfskkg ceavaedevt
      121 hrfsseells wnllsrtnan lhhvswklaa vwvtgiliry clllpfricl svfsilllvl
      181 attvvgrfpn grvkgwlsnq vqmicatlgv rclsglvhfh nrenkpqegg icvanhtspl
      241 dvlilasdgc yslvgqvhgg lmgliqkscm qtsqhvlfer semkdrhlvr kkirehiadk
      301 aklpilifpe gtcinntsvm mfkkgsfeyd prfgdafwns tkhsmmtyaf nvltswaivc
      361 nvwylppmvk eeeedavhfa nrvkaviaar agmsvlpwdg glkrkkvkes fkeeqqkkyc
      421 qiviengsvg nrnvc
//
LOCUS       XP_041336192             421 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336192
VERSION     XP_041336192.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480258.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..421
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X4"
                     /calculated_mol_wt=47376
     Region          187..390
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(211,214,216,230..233,286..288)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..421
                     /gene="LOC121360414"
                     /coded_by="XM_041480258.1:135..1400"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 meenreghgl aegkilsiwi ilfvalillp sifrvslgis hfyvkivikm lewatlqiee
       61 gvkkqkamal enlistgiiq rdetpmekev vgwcrgcfgl advmyfskkg ceavaedevt
      121 hrfsseells wnllsrtnan lhhvswklaa vwvtgiliry clllpfrvkg wlsnqvqmic
      181 atlgvrclsg lvhfhnrenk pqeggicvan htspldvlil asdgcyslvg qvhgglmgli
      241 qkscmqtsqh vlfersemkd rhlvrkkire hiadkaklpi lifpegtcin ntsvmmfkkg
      301 sfevggtihp vaikydprfg dafwnstkhs mmtyafnvlt swaivcnvwy lppmvkeeee
      361 davhfanrvk aviaaragms vlpwdgglkr kkvkesfkee qqkkycqivi engsvgnrnv
      421 c
//
LOCUS       XP_041336200             420 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336200
VERSION     XP_041336200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X5"
                     /calculated_mol_wt=47221
     Region          186..389
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(210,213,215,229..232,285..287)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..420
                     /gene="LOC121360414"
                     /coded_by="XM_041480266.1:387..1649"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 mfwsstrsel lyeallllek isqlkiwatl qieegvkkqk amalenlist giiqrdetpm
       61 ekevvgwcrg cfgladvmyf skkgceavae devthrfsse ellswnllsr tnanlhhvsw
      121 klaavwvtgi liryclllpf riclsvfsil llvlattvvg rfpngrvkgw lsnqvqmica
      181 tlgvrclsgl vhfhnrenkp qeggicvanh tspldvlila sdgcyslvgq vhgglmgliq
      241 kscmqtsqhv lfersemkdr hlvrkkireh iadkaklpil ifpegtcinn tsvmmfkkgs
      301 fevggtihpv aikydprfgd afwnstkhsm mtyafnvlts waivcnvwyl ppmvkeeeed
      361 avhfanrvka viaaragmsv lpwdgglkrk kvkesfkeeq qkkycqivie ngsvgnrnvc
//
LOCUS       XP_041336210             417 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336210
VERSION     XP_041336210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X6"
                     /calculated_mol_wt=46856
     Region          212..382
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(236,239,241,255..258,311..313)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..417
                     /gene="LOC121360414"
                     /coded_by="XM_041480276.1:135..1388"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 meenreghgl aegkilsiwi ilfvalillp sifrvslgis hfyvkivikm lewatlqiee
       61 gvkkqkamal enlistgiiq rdetpmekev vgwcrgcfgl advmyfskkg ceavaedevt
      121 hrfsseells wnllsrtnan lhhvswklaa vwvtgiliry clllpfricl svfsilllvl
      181 attvvgrfpn grvkgwlsnq vqmicatlgv rclsglvhfh nrenkpqegg icvanhtspl
      241 dvlilasdgc yslvgqvhgg lmgliqkscm qtsqhvlfer semkdrhlvr kkirehiadk
      301 aklpilifpe gtcinntsvm mfkkgsfevg gtihpvaiky dprfgdafwn stkhsmmtya
      361 fnvltswaiv cnvwylppmv kevltllkkk mlftlltesr lsslleqecl cfhgmgd
//
LOCUS       XP_041336216             379 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336216
VERSION     XP_041336216.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480282.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..379
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X7"
                     /calculated_mol_wt=42416
     Region          145..348
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(169,172,174,188..191,244..246)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..379
                     /gene="LOC121360414"
                     /coded_by="XM_041480282.1:416..1555"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 malenlistg iiqrdetpme kevvgwcrgc fgladvmyfs kkgceavaed evthrfssee
       61 llswnllsrt nanlhhvswk laavwvtgil iryclllpfr iclsvfsill lvlattvvgr
      121 fpngrvkgwl snqvqmicat lgvrclsglv hfhnrenkpq eggicvanht spldvlilas
      181 dgcyslvgqv hgglmgliqk scmqtsqhvl fersemkdrh lvrkkirehi adkaklpili
      241 fpegtcinnt svmmfkkgsf evggtihpva ikydprfgda fwnstkhsmm tyafnvltsw
      301 aivcnvwylp pmvkeeeeda vhfanrvkav iaaragmsvl pwdgglkrkk vkesfkeeqq
      361 kkycqivien gsvgnrnvc
//
LOCUS       XP_041336224             361 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336224
VERSION     XP_041336224.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480290.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X8"
                     /calculated_mol_wt=40432
     Region          127..330
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(151,154,156,170..173,226..228)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..361
                     /gene="LOC121360414"
                     /coded_by="XM_041480290.1:397..1482"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 mekevvgwcr gcfgladvmy fskkgceava edevthrfss eellswnlls rtnanlhhvs
       61 wklaavwvtg iliryclllp friclsvfsi lllvlattvv grfpngrvkg wlsnqvqmic
      121 atlgvrclsg lvhfhnrenk pqeggicvan htspldvlil asdgcyslvg qvhgglmgli
      181 qkscmqtsqh vlfersemkd rhlvrkkire hiadkaklpi lifpegtcin ntsvmmfkkg
      241 sfevggtihp vaikydprfg dafwnstkhs mmtyafnvlt swaivcnvwy lppmvkeeee
      301 davhfanrvk aviaaragms vlpwdgglkr kkvkesfkee qqkkycqivi engsvgnrnv
      361 c
//
LOCUS       XP_041336230             361 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336230
VERSION     XP_041336230.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480296.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X8"
                     /calculated_mol_wt=40432
     Region          127..330
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(151,154,156,170..173,226..228)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..361
                     /gene="LOC121360414"
                     /coded_by="XM_041480296.1:65..1150"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 mekevvgwcr gcfgladvmy fskkgceava edevthrfss eellswnlls rtnanlhhvs
       61 wklaavwvtg iliryclllp friclsvfsi lllvlattvv grfpngrvkg wlsnqvqmic
      121 atlgvrclsg lvhfhnrenk pqeggicvan htspldvlil asdgcyslvg qvhgglmgli
      181 qkscmqtsqh vlfersemkd rhlvrkkire hiadkaklpi lifpegtcin ntsvmmfkkg
      241 sfevggtihp vaikydprfg dafwnstkhs mmtyafnvlt swaivcnvwy lppmvkeeee
      301 davhfanrvk aviaaragms vlpwdgglkr kkvkesfkee qqkkycqivi engsvgnrnv
      361 c
//
LOCUS       XP_041336239             244 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate acyltransferase 3-like isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336239
VERSION     XP_041336239.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480305.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..244
                     /product="glycerol-3-phosphate acyltransferase 3-like
                     isoform X9"
                     /calculated_mol_wt=27206
     Region          10..213
                     /region_name="LPLAT_LPCAT1-like"
                     /note="Lysophospholipid Acyltransferases (LPLATs) of
                     Glycerophospholipid Biosynthesis: LPCAT1-like; cd07991"
                     /db_xref="CDD:153253"
     Site            order(34,37,39,53..56,109..111)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153253"
     CDS             1..244
                     /gene="LOC121360414"
                     /coded_by="XM_041480305.1:402..1136"
                     /db_xref="GeneID:121360414"
ORIGIN      
        1 micatlgvrc lsglvhfhnr enkpqeggic vanhtspldv lilasdgcys lvgqvhgglm
       61 gliqkscmqt sqhvlferse mkdrhlvrkk irehiadkak lpilifpegt cinntsvmmf
      121 kkgsfevggt ihpvaikydp rfgdafwnst khsmmtyafn vltswaivcn vwylppmvke
      181 eeedavhfan rvkaviaara gmsvlpwdgg lkrkkvkesf keeqqkkycq iviengsvgn
      241 rnvc
//
LOCUS       XP_041336250             585 aa            linear   VRT 06-MAY-2021
DEFINITION  heparanase [Pyrgilauda ruficollis].
ACCESSION   XP_041336250
VERSION     XP_041336250.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480316.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..585
                     /product="heparanase"
                     /calculated_mol_wt=64807
     Region          <212..412
                     /region_name="Glyco_hydro_79n"
                     /note="Glycosyl hydrolase family 79, N-terminal domain;
                     pfam03662"
                     /db_xref="CDD:461010"
     CDS             1..585
                     /gene="HPSE"
                     /coded_by="XM_041480316.1:169..1926"
                     /db_xref="GeneID:121360463"
ORIGIN      
        1 mllepfqrvr kvlltparlf ragsgalqpr arppllggga gggaggvgaa grdrrmllsl
       61 lplllllllp alaeghraav lrlglrdspr gevslaflsl tldaslardp ryvallsnsk
      121 lralatalsp gflrfggtet dflifdpnkd stseekifwe fqaqqeacgs rpafaavekv
      181 lltqwpsqek lilaeqnrkk hknititknt ldilysfanc sgfhlifgln allrkgglqw
      241 dssnaqalld ycasqrynis welgnepnsf rkksgihidg fqlgqdfihl rqllnnyaly
      301 qhaklygpdv gqprkhtqrl lrsflksggk vidsvtwhhy yvngqsatrg dflspevldt
      361 fataiyevle ivgqtvpdkk vwlgetssay gggaprlsnt yvagfmwldk lglsarqgid
      421 vvmrqvffga gtyhlvdanf eplpdywlsl lykklvgtkv lqvglagank rklrvylhct
      481 sslnpkyreg dvtlfalnly nvtqhlklpd ylsskhvdqy lllphgkeni lsrsielnsr
      541 vlrmlddetl pelmekplgp grllglpafs ygfyviknak aiaci
//
LOCUS       XP_041336265             345 aa            linear   VRT 06-MAY-2021
DEFINITION  4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336265
VERSION     XP_041336265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..345
                     /product="4-hydroxybenzoate polyprenyltransferase,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=37802
     Region          59..344
                     /region_name="PT_UbiA"
                     /note="UbiA family of prenyltransferases (PTases);
                     cl00337"
                     /db_xref="CDD:469727"
     CDS             1..345
                     /gene="COQ2"
                     /coded_by="XM_041480331.1:14..1051"
                     /db_xref="GeneID:121360480"
ORIGIN      
        1 maavllarfc rgppglrgsl gfhaarppla aapplllrrp aaplgprsfs aaelvraapa
       61 plqpylrlmr lhqpagtwll ylpctwsigl aaapgclpdw rmlslfgvga vlmrgagcti
      121 ndmwdrdydr qvartasrpl aagdistfqs lvflggqlsl alcvllclny ysiilgaasl
      181 flvvtyplmk ritywpqlvl gftfnwgall gwsaikgsce wsvclplyfa gvmwtlvydt
      241 iyahqdkrdd imigvkstal qfredtkqwl sgfslamlls lcvagmncnq tlpyysavaa
      301 igvhlahqiy tldidkpedc wkkfasnrtv gillfigivl gnlwk
//
LOCUS       XP_041336275             282 aa            linear   VRT 06-MAY-2021
DEFINITION  4-hydroxybenzoate polyprenyltransferase, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336275
VERSION     XP_041336275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509655.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="4-hydroxybenzoate polyprenyltransferase,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=30891
     Region          59..281
                     /region_name="PT_UbiA"
                     /note="UbiA family of prenyltransferases (PTases);
                     cl00337"
                     /db_xref="CDD:469727"
     CDS             1..282
                     /gene="COQ2"
                     /coded_by="XM_041480341.1:14..862"
                     /db_xref="GeneID:121360480"
ORIGIN      
        1 maavllarfc rgppglrgsl gfhaarppla aapplllrrp aaplgprsfs aaelvraapa
       61 plqpylrlmr lhqpagtwll ylpctwsigl aaapgclpdw rmlslfgvga vlmrgagcti
      121 ndmwdrdydr qvartasrpl aagdistfqs lvflggqlsl alcvllclny ysiilgaasl
      181 flvvtyplmk ritywpqlvl gftfnwgall gwsaikgsce wsvclplyfa gvmwtlvydt
      241 iyahqiytld idkpedcwkk fasnrtvgil lfigivlgnl wk
//
LOCUS       XP_041336287             761 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-1(I) chain-like [Pyrgilauda ruficollis].
ACCESSION   XP_041336287
VERSION     XP_041336287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480353.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509656.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..761
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=77693
     Region          <23..>176
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..761
                     /gene="LOC121360488"
                     /coded_by="XM_041480353.1:1..2286"
                     /db_xref="GeneID:121360488"
ORIGIN      
        1 mglgppetgp gppgppglre gprerdrdpr dpersgktpe nerdsreter dprdprepgr
       61 dprnpreter dprdpergge vpetskgtpg tglgppgprt grgdprdprg tpetpespng
      121 tpgtglgppr tdrdprnrtg tpgnragtpg tglrpsgrdr dprdtgnrag kpreptgtpg
      181 ngrgtpgtpe spsgtlatgl gppewgwdpr ngagtpesrv gppvhrehre pgwdprdpre
      241 psgtpgngrg tpgtpgprap gpprardprd pqkgtpgdrd tgtpgtcrdr dprngngtpe
      301 sragppgpag tgatggggar gtgrtdgrtd epgawepppp aapavtqrrs pplpsapaaa
      361 eapgpsgppe pvppgsager gpgpgpppap lrhprdprss sassrhrvgg grfapvdprn
      421 preterdprd perggevpet skgtpgtglg ppgprtgrgd prdprgtpet pespngtpgt
      481 glgpprtdrd prnrtgtpgn ragtpgtglr psgrdrdprd tgnragkpre ptgtpgngrg
      541 tpgtpespsg tlatglgppe wgwdprngag tpesrvgppv hrehrepgwd prdprepsgt
      601 pgngrgtpgt pgprapgppr ardprdpqkg tpgdrdtgtp gtcrdrdprn gngtpesrag
      661 ppgpagtgat ggggargtgr tdgrtdepga weppppaapa vtqrrspplp sapaaaeapg
      721 psgppepvpp gsagergpgp gpppaplrhp rdprsssars r
//
LOCUS       XP_041336307             430 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium-transporting ATPase alpha chain 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336307
VERSION     XP_041336307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480373.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509667.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>430
                     /product="potassium-transporting ATPase alpha chain
                     1-like"
     Region          7..>425
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     CDS             1..430
                     /gene="LOC121360502"
                     /coded_by="XM_041480373.1:<1..>1291"
                     /codon_start=2
                     /db_xref="GeneID:121360502"
ORIGIN      
        1 dhsvpqglse aaaaerllrd gpnalrpprg tpgcvrfgrq lagglqclmw vaaaicliay
       61 gvqegegdrg ssdnlylava liavvvvtgc fgyyqefkst niiasfrslv pqqatvvrag
      121 qvlqvnaael vvgdlveikg gdrvpadirv laaqgckvdn ssltgesepq prspecthes
      181 hletrniaff stmclegtat glvistgdrt vigriaslas gvenektpia veiehfvdii
      241 aglavffggt ffvvamligy pflralvffm aivvayvpeg llatvtvcls ltakrlarrn
      301 cvvknleave tlgstsvics dktgtltqnr mavahlwfdg qvhaadtted qsgemgtper
      361 gtgrgggrvl taapplppqr dvigdasesa llkfaevtsg svaaargryp kvaelpfnss
      421 nkfqvrhlgq
//
LOCUS       XP_041336328             118 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor-associated protein isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336328
VERSION     XP_041336328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509678.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="gamma-aminobutyric acid receptor-associated
                     protein isoform X1"
                     /calculated_mol_wt=13450
     Region          5..>82
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..118
                     /gene="LOC121360512"
                     /coded_by="XM_041480394.1:708..1064"
                     /db_xref="GeneID:121360512"
ORIGIN      
        1 mkflykeehp fekrrcegek irkkypdrvp vivekapkar igdldkkkyl vpsdltvgqf
       61 yflirkrihl raedallsfw vnfglilgvf gvssgavlfp hpktdpplgr grpaqflg
//
LOCUS       XP_041336337             117 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor-associated protein isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336337
VERSION     XP_041336337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480403.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509678.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..117
                     /product="gamma-aminobutyric acid receptor-associated
                     protein isoform X2"
                     /calculated_mol_wt=13727
     Region          2..116
                     /region_name="Ubl_ATG8_GABARAP"
                     /note="ubiquitin-like (Ubl) domain found in
                     gamma-aminobutyric acid receptor-associated protein
                     (GABARAP); cd17232"
                     /db_xref="CDD:340752"
     Site            order(5,9,17,21,25,28,30..32,44..50,52,63,104)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:340752"
     Site            order(28,34..35,46,49,58..59,61..63,65..67,72..73,75..77,
                     79,82..84,86..88,112..116)
                     /site_type="other"
                     /note="Atg7 interaction site [polypeptide binding]"
                     /db_xref="CDD:340752"
     Site            order(36,61,65,72..77,79,82..87,108,110..116)
                     /site_type="other"
                     /note="Atg4 interaction site [polypeptide binding]"
                     /db_xref="CDD:340752"
     CDS             1..117
                     /gene="LOC121360512"
                     /coded_by="XM_041480403.1:693..1046"
                     /db_xref="GeneID:121360512"
ORIGIN      
        1 mkflykeehp fekrrcegek irkkypdrvp vivekapkar igdldkkkyl vpsdltvgqv
       61 yflirkrihl raedalfffv nnvipptsat mgqlyqehhe edfflyiays desvyga
//
LOCUS       XP_041336348             339 aa            linear   VRT 06-MAY-2021
DEFINITION  snRNA-activating protein complex subunit 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041336348
VERSION     XP_041336348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480414.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509678.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="snRNA-activating protein complex subunit 2"
                     /calculated_mol_wt=36529
     Region          60..321
                     /region_name="SNAPC2"
                     /note="Small nuclear RNA activating complex (SNAPc),
                     subunit 2; pfam11035"
                     /db_xref="CDD:463210"
     CDS             1..339
                     /gene="SNAPC2"
                     /coded_by="XM_041480414.1:211..1230"
                     /db_xref="GeneID:121360525"
ORIGIN      
        1 mladfidcpp ddektsetpl graapgaves lrrrvtsqkr akktrppfrl regeaaamkp
       61 prrprlipar farlppsper pqrgswalqe krallealra eaqrglpepr maalrerlpr
      121 kseeeiraml vrlrgraare alsskfrnfl qfqsrirapi qvwgglgnlg dpelgiwead
      181 fgvpgviflv tlaatepltl ehsrppqnlg tpanlgpsqn sgtppevetp qnsgspqnpg
      241 gwevdfgriy eflarisagg kepplspaea avvlsllgal paelgalgal gglqrhlrgl
      301 wgslsaprtp geppqspepa qcpplnpllv plgllgrag
//
LOCUS       XP_041336361             211 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 23-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041336361
VERSION     XP_041336361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480427.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509678.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>211
                     /product="PHD finger protein 23-like"
     CDS             1..211
                     /gene="LOC121360533"
                     /coded_by="XM_041480427.1:16..>648"
                     /db_xref="GeneID:121360533"
ORIGIN      
        1 mrdgqnrpgv gvariistvr mrrkqkalgp lktepqppek rrrtiedfnk fcsfvlayag
       61 yipataedpp wpssgpsspr paggdawgsa paalrtietf vrkaksskkr alappesail
      121 dkmrlkdslf dlpapqnnpg pppqkrrerr nrrgdsgmgg gsrggrensr irvkkskkrr
      181 wkkgdrgvlg rgspseetds eeeppspppp p
//
LOCUS       XP_041336374             383 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil and C2 domain-containing protein 1A-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336374
VERSION     XP_041336374.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480440.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509689.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..383
                     /product="coiled-coil and C2 domain-containing protein
                     1A-like"
                     /calculated_mol_wt=40121
     Region          131..192
                     /region_name="DM14"
                     /note="Repeats in fly CG4713, worm Y37H9A.3 and human
                     FLJ20241; smart00685"
                     /db_xref="CDD:128928"
     Region          234..>278
                     /region_name="DM14"
                     /note="Repeats in fly CG4713, worm Y37H9A.3 and human
                     FLJ20241; smart00685"
                     /db_xref="CDD:128928"
     Region          314..371
                     /region_name="DM14"
                     /note="Repeats in fly CG4713, worm Y37H9A.3 and human
                     FLJ20241; smart00685"
                     /db_xref="CDD:128928"
     CDS             1..383
                     /gene="LOC121360540"
                     /coded_by="XM_041480440.1:70..1221"
                     /db_xref="GeneID:121360540"
ORIGIN      
        1 msrarrapgr gaamarqmgl ladpgaggsp ggaggagdaa leaelllllg greapergep
       61 psppqrdlaa vealarlclr dppeeeeeeg eedleneeel laelqevlqe gpgsadeaet
      121 pqdpgpagal laeleerael yraalgtagt gngngngarl rrlqrglktl eqllrsvrsg
      181 kpidradipp pvalgkpggt pglpppaspe ppvqppappg pppapepprd pcpalrlrlq
      241 elqreavlar rrgdnatalg hfraakrlea qlealgrgpa adpqaeetrd ppgkdppgkd
      301 ppasspeapr dvrealeqrm eryrvaagqa rasgdarkar mherilkvga agprrgargr
      361 agslsqihdp vqswdpraei pvl
//
LOCUS       XP_041336387             118 aa            linear   VRT 06-MAY-2021
DEFINITION  nanos homolog 3-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041336387
VERSION     XP_041336387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480453.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509689.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..118
                     /product="nanos homolog 3-like"
     Region          38..91
                     /region_name="zf-nanos"
                     /note="Nanos RNA binding domain; pfam05741"
                     /db_xref="CDD:461728"
     CDS             1..118
                     /gene="LOC121360546"
                     /coded_by="XM_041480453.1:<1..359"
                     /codon_start=3
                     /db_xref="GeneID:121360546"
ORIGIN      
        1 phagpyphvg papcarpalc aeppppvgpp acsapvacsf cqhngeapgv yqshslrdaq
       61 grlqcpvlrs yvcpqcgatq dqahtrrfcp rthrgytsvy arpapaggar rrprdasm
//
LOCUS       XP_041336396             241 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin-folding cofactor B [Pyrgilauda ruficollis].
ACCESSION   XP_041336396
VERSION     XP_041336396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480462.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509700.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 50% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..241
                     /product="tubulin-folding cofactor B"
                     /calculated_mol_wt=26062
     Region          11..89
                     /region_name="Ubl_TBCB"
                     /note="ubiquitin-like (Ubl) domain found in
                     tubulin-folding cofactor B (TBCB) and similar proteins;
                     cd01789"
                     /db_xref="CDD:340487"
     CDS             1..241
                     /gene="TBCB"
                     /coded_by="XM_041480462.1:216..941"
                     /db_xref="GeneID:121360554"
ORIGIN      
        1 mngggtgpgp vwlavsssln afrackrfsp sltiaelkck lelvvgspas cmdlelfgae
       61 deplgtldcd eallgsypvt dgcrvhvtdr sgaragqfed vsqvakyema esdydkrtgg
      121 lgdigdiggv gdiggsgdig rvgdikgagd lsqvakyema esdydkrtgg lgdiadvges
      181 pctpgaagtr tgteneslha wgcwdqdwdr erdrewdwdr ewereqdrer drerereqdq
      241 e
//
LOCUS       XP_041336418             261 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121360565, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336418
VERSION     XP_041336418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480484.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509711.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>261
                     /product="uncharacterized protein LOC121360565"
     CDS             1..261
                     /gene="LOC121360565"
                     /coded_by="XM_041480484.1:9..>792"
                     /db_xref="GeneID:121360565"
ORIGIN      
        1 mgtwmdtrtd gwtpgqtdnw adgqpdtwai khqdrrtpgq tdtrtnghqd khldhcttgh
       61 ldnwitrhqd rhrdkrtpgq tprqpedrts ghqdkwtpgq tdtwtnghqd trkiahldrr
      121 ttgqtdirip gqmhtrttgh qdkrtpgqtp gqpdtrtdgd rdkrtpgqtd nwtdghqnrh
      181 ldkctpgqtd nwtnghqdnw tpgqtpgrrd twtdghrdsr ppghpdpgts ghralrtdgr
      241 tdrptapptp prahltsgrg h
//
LOCUS       XP_041336433             210 aa            linear   VRT 06-MAY-2021
DEFINITION  extended synaptotagmin-1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041336433
VERSION     XP_041336433.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480499.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509733.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..210
                     /product="extended synaptotagmin-1-like"
     Region          20..122
                     /region_name="C2B_Synaptotagmin-like"
                     /note="C2 domain second repeat present in
                     Synaptotagmin-like proteins; cd04050"
                     /db_xref="CDD:176015"
     CDS             1..210
                     /gene="LOC121360568"
                     /coded_by="XM_041480499.1:<1..633"
                     /db_xref="GeneID:121360568"
ORIGIN      
        1 vlhtnsllqp shgpelsaal lrvfldraad lplrkgskpp safaslavrd vsfktktcap
       61 stepvwdegf sflikrphae slelqvkeeg ghtlgtlslp laqllaregl amdgwvplag
      121 gaqlllraql gvlvsqqvee raagrgqrgg daerpqeeee eeeeeegdee gppngdsgdt
      181 ggcdfseeqt agrvpvvpal tqegvpvalr
//
LOCUS       XP_041336447             123 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041336447
VERSION     XP_041336447.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480513.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509739.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..123
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..123
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex subunit 3"
     Region          18..>63
                     /region_name="NADHdh_A3"
                     /note="NADH dehydrogenase 1 alpha subcomplex subunit 3;
                     pfam14987"
                     /db_xref="CDD:464423"
     CDS             1..123
                     /gene="NDUFA3"
                     /coded_by="XM_041480513.1:<1..372"
                     /db_xref="GeneID:121360573"
ORIGIN      
        1 fwpflprfcp rpgvagalrs lwakepviaa sfgiaalall spllspysky sgminqatpy
       61 aypgteprkq pgtalktaqn rgqnvpkial ktaqnraqnt pkialktarn spenspksgp
      121 kcp
//
LOCUS       XP_041336470             405 aa            linear   VRT 06-MAY-2021
DEFINITION  arrestin domain-containing protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336470
VERSION     XP_041336470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="arrestin domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=44277
     Region          9..159
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     pfam00339"
                     /db_xref="CDD:425619"
     Region          182..308
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..405
                     /gene="ARRDC2"
                     /coded_by="XM_041480536.1:432..1649"
                     /db_xref="GeneID:121360584"
ORIGIN      
        1 mifdrlkrfs ivlegaerdg paafspgqav sgrvvlelaa aarlgalrlr amgaarvhwt
       61 esrsagssta ytqsysdqve flshrdtlma ppdngeatvl qagkhefpft fqlpetlvts
      121 fegkhgsvry wvkaklhrpw stvkkakkef tviepidint pallapqaga keklarawyc
      181 nrgqvsvtak idrkgytpge vipifaeidn ctsravvpka aiiqtqtfia rgtkkqkksv
      241 vtsitgdpip agkrevwhgr alkippvgps ilqcriiqve yslkvcvdip gtsklllelp
      301 lvigtiplhp fgsrtssvss qysvnldwls tipeqleapp eysavvsspe aeqslappcr
      361 selgdilegp ffayiqefrf rppplysevd pnpasdsirp rcmtc
//
LOCUS       XP_041336481             398 aa            linear   VRT 06-MAY-2021
DEFINITION  arrestin domain-containing protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336481
VERSION     XP_041336481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="arrestin domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=43916
     Region          22..152
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          175..301
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..398
                     /gene="ARRDC2"
                     /coded_by="XM_041480547.1:200..1396"
                     /db_xref="GeneID:121360584"
ORIGIN      
        1 mqppgrvrrl avrledgpah gggellhgqv qlelrgalrv ralevcargl atvhwleshs
       61 iglnivyrdy tacqtflyrr qqlisdngea tvlqagkhef pftfqlpetl vtsfegkhgs
      121 vrywvkaklh rpwstvkkak keftviepid intpallapq agakeklara wycnrgqvsv
      181 takidrkgyt pgevipifae idnctsravv pkaaiiqtqt fiargtkkqk ksvvtsitgd
      241 pipagkrevw hgralkippv gpsilqcrii qveyslkvcv dipgtsklll elplvigtip
      301 lhpfgsrtss vssqysvnld wlstipeqle appeysavvs speaeqslap pcrselgdil
      361 egpffayiqe frfrppplys evdpnpasds irprcmtc
//
LOCUS       XP_041336498             194 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM174C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041336498
VERSION     XP_041336498.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480564.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="protein FAM174C isoform X1"
                     /calculated_mol_wt=20898
     Region          <73..194
                     /region_name="DUF1180"
                     /note="Protein of unknown function (DUF1180); pfam06679"
                     /db_xref="CDD:429067"
     CDS             1..194
                     /gene="FAM174C"
                     /coded_by="XM_041480564.1:115..699"
                     /db_xref="GeneID:121360598"
ORIGIN      
        1 mseplggsvs gsrparngaa pepasgsagp grglrrahrr gaflrpplpl rrpgpamprl
       61 lflllfllvp hlgraaapsp gnstepprat tgngthtese hesgprlsvg sglpvlrrav
      121 yvlsalsala afyfmlrafr prsegprnep kthfrlkkpq rkkygllssq denvelgsld
      181 sdedtvfenr nlrr
//
LOCUS       XP_041336507             179 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM174C isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041336507
VERSION     XP_041336507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="protein FAM174C isoform X2"
                     /calculated_mol_wt=19108
     Region          <73..179
                     /region_name="DUF1180"
                     /note="Protein of unknown function (DUF1180); pfam06679"
                     /db_xref="CDD:429067"
     CDS             1..179
                     /gene="FAM174C"
                     /coded_by="XM_041480573.1:83..622"
                     /db_xref="GeneID:121360598"
ORIGIN      
        1 mseplggsvs gsrparngaa pepasgsagp grglrrahrr gaflrpplpl rrpgpamprl
       61 lflllfllvp hlgraaapsp gnstepprat tgngthtese hesgprlsvg sglpvlrrav
      121 yvlsalsala afyfmlrafr lkkpqrkkyg llssqdenve lgsldsdedt vfenrnlrr
//
LOCUS       XP_041336520             175 aa            linear   VRT 06-MAY-2021
DEFINITION  cold-inducible RNA-binding protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336520
VERSION     XP_041336520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..175
                     /product="cold-inducible RNA-binding protein isoform X1"
                     /calculated_mol_wt=19041
     Region          6..85
                     /region_name="RRM_CIRBP_RBM3"
                     /note="RNA recognition motif (RRM) found in cold inducible
                     RNA binding protein (CIRBP), RNA binding motif protein 3
                     (RBM3) and similar proteins; cd12449"
                     /db_xref="CDD:409883"
     CDS             1..175
                     /gene="LOC121360611"
                     /coded_by="XM_041480586.1:254..781"
                     /db_xref="GeneID:121360611"
ORIGIN      
        1 masdegklfv gglsfdtneq sleqvfskyg qisevvvvkd retqrsrgfg fvtfenidda
       61 kdammamngk svdgrqirvd qagkssenrs rgyrggssgg rgffrggrgr grgfsrgggd
      121 rgyggsrfds rsggyngsrd yynsrsqggy gdrnsggsyr dsydsygksc ferer
//
LOCUS       XP_041336528             175 aa            linear   VRT 06-MAY-2021
DEFINITION  cold-inducible RNA-binding protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336528
VERSION     XP_041336528.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480594.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..175
                     /product="cold-inducible RNA-binding protein isoform X1"
                     /calculated_mol_wt=19041
     Region          6..85
                     /region_name="RRM_CIRBP_RBM3"
                     /note="RNA recognition motif (RRM) found in cold inducible
                     RNA binding protein (CIRBP), RNA binding motif protein 3
                     (RBM3) and similar proteins; cd12449"
                     /db_xref="CDD:409883"
     CDS             1..175
                     /gene="LOC121360611"
                     /coded_by="XM_041480594.1:31..558"
                     /db_xref="GeneID:121360611"
ORIGIN      
        1 masdegklfv gglsfdtneq sleqvfskyg qisevvvvkd retqrsrgfg fvtfenidda
       61 kdammamngk svdgrqirvd qagkssenrs rgyrggssgg rgffrggrgr grgfsrgggd
      121 rgyggsrfds rsggyngsrd yynsrsqggy gdrnsggsyr dsydsygksc ferer
//
LOCUS       XP_041336537             171 aa            linear   VRT 06-MAY-2021
DEFINITION  cold-inducible RNA-binding protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336537
VERSION     XP_041336537.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480603.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..171
                     /product="cold-inducible RNA-binding protein isoform X2"
                     /calculated_mol_wt=18500
     Region          6..85
                     /region_name="RRM_CIRBP_RBM3"
                     /note="RNA recognition motif (RRM) found in cold inducible
                     RNA binding protein (CIRBP), RNA binding motif protein 3
                     (RBM3) and similar proteins; cd12449"
                     /db_xref="CDD:409883"
     CDS             1..171
                     /gene="LOC121360611"
                     /coded_by="XM_041480603.1:140..655"
                     /db_xref="GeneID:121360611"
ORIGIN      
        1 masdegklfv gglsfdtneq sleqvfskyg qisevvvvkd retqrsrgfg fvtfenidda
       61 kdammamngk svdgrqirvd qagkssenrs rgyrggssgg rgffrggrgr grgfsrgggd
      121 rgyggsrfds rsggyngsrd yynsrsqggy gdrnsggsyr dsydsyathn e
//
LOCUS       XP_041336545             171 aa            linear   VRT 06-MAY-2021
DEFINITION  cold-inducible RNA-binding protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336545
VERSION     XP_041336545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..171
                     /product="cold-inducible RNA-binding protein isoform X2"
                     /calculated_mol_wt=18500
     Region          6..85
                     /region_name="RRM_CIRBP_RBM3"
                     /note="RNA recognition motif (RRM) found in cold inducible
                     RNA binding protein (CIRBP), RNA binding motif protein 3
                     (RBM3) and similar proteins; cd12449"
                     /db_xref="CDD:409883"
     CDS             1..171
                     /gene="LOC121360611"
                     /coded_by="XM_041480611.1:52..567"
                     /db_xref="GeneID:121360611"
ORIGIN      
        1 masdegklfv gglsfdtneq sleqvfskyg qisevvvvkd retqrsrgfg fvtfenidda
       61 kdammamngk svdgrqirvd qagkssenrs rgyrggssgg rgffrggrgr grgfsrgggd
      121 rgyggsrfds rsggyngsrd yynsrsqggy gdrnsggsyr dsydsyathn e
//
LOCUS       XP_041336567             313 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 22 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041336567
VERSION     XP_041336567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="fibroblast growth factor 22 isoform X1"
                     /calculated_mol_wt=33722
     Region          98..311
                     /region_name="beta-trefoil_FGF22"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 22 (FGF22) and similar proteins; cd23321"
                     /db_xref="CDD:467007"
     CDS             1..313
                     /gene="FGF22"
                     /coded_by="XM_041480633.1:1..942"
                     /db_xref="GeneID:121360635"
ORIGIN      
        1 mngrhrpspr pahssppprp gppipgssrr rgrspvaava mahrpspacr pppaamrrgg
       61 paaiaaclag alavlagpgp gpgsatgtgr rpprsyghle gdvrwrrlfs atrfflridg
      121 sggvegtrwr erpgsiveir svrvgvvair avhtgfylam nkrgrlygsv grtlppgrdc
      181 trvrgsgqsw nrvllsralt cspagdcthq aplplgdqrg arvlpcptlg vrgapaersh
      241 pslpslscqk efspnckfte rieengynty aslrwrhrgr pmflslnskg rpqrggrtrr
      301 qhlsthflpm lvs
//
LOCUS       XP_041336576             233 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 22 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041336576
VERSION     XP_041336576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="fibroblast growth factor 22 isoform X2"
                     /calculated_mol_wt=25342
     Region          98..231
                     /region_name="beta-trefoil_FGF22"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 22 (FGF22) and similar proteins; cd23321"
                     /db_xref="CDD:467007"
     CDS             1..233
                     /gene="FGF22"
                     /coded_by="XM_041480642.1:1..702"
                     /db_xref="GeneID:121360635"
ORIGIN      
        1 mngrhrpspr pahssppprp gppipgssrr rgrspvaava mahrpspacr pppaamrrgg
       61 paaiaaclag alavlagpgp gpgsatgtgr rpprsyghle gdvrwrrlfs atrfflridg
      121 sggvegtrwr erpgsiveir svrvgvvair avhtgfylam nkrgrlygsk efspnckfte
      181 rieengynty aslrwrhrgr pmflslnskg rpqrggrtrr qhlsthflpm lvs
//
LOCUS       XP_041336585             232 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 22 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041336585
VERSION     XP_041336585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..232
                     /product="fibroblast growth factor 22 isoform X3"
                     /calculated_mol_wt=25214
     Region          98..230
                     /region_name="beta-trefoil_FGF22"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 22 (FGF22) and similar proteins; cd23321"
                     /db_xref="CDD:467007"
     CDS             1..232
                     /gene="FGF22"
                     /coded_by="XM_041480651.1:1..699"
                     /db_xref="GeneID:121360635"
ORIGIN      
        1 mngrhrpspr pahssppprp gppipgssrr rgrspvaava mahrpspacr pppaamrrgg
       61 paaiaaclag alavlagpgp gpgsatgtgr rpprsyghle gdvrwrrlfs atrfflridg
      121 sggvegtrwr erpgsiveir svrvgvvair avhtgfylam nkrgrlygse fspnckfter
      181 ieengyntya slrwrhrgrp mflslnskgr pqrggrtrrq hlsthflpml vs
//
LOCUS       XP_041336598             313 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF126 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336598
VERSION     XP_041336598.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480664.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="E3 ubiquitin-protein ligase RNF126 isoform X1"
                     /calculated_mol_wt=34294
     Region          10..40
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     Region          228..277
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(230,233,248,250,253,256,267,270)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..313
                     /gene="RNF126"
                     /coded_by="XM_041480664.1:95..1036"
                     /db_xref="GeneID:121360647"
ORIGIN      
        1 maeaspqpgr ffchccsaei aprlpdyicp rcesgfieel peeprnadne tssstsatdq
       61 srhpfenvdq hlftlppgyg qfafgffdds fefpfgsnvq pednrdsenr rerehqsrhr
      121 ygarqprarl aarrasgrhe gvptlegiiq qlvngiiapt tipnlglgpw gvlhsnpmdy
      181 awgangldai itqllnqfen tgpppadkek iqalptiqit qehvdsglec pvckedytvg
      241 envrqlpcnh lfhdgcivpw leqhdtcpvc rkslsgqnta tnppgltgmn fsssssssss
      301 ssspsnenss nns
//
LOCUS       XP_041336604             273 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF126 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336604
VERSION     XP_041336604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="E3 ubiquitin-protein ligase RNF126 isoform X2"
                     /calculated_mol_wt=30405
     Region          10..40
                     /region_name="zinc_ribbon_9"
                     /note="zinc-ribbon; pfam14369"
                     /db_xref="CDD:433910"
     Region          229..>263
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..273
                     /gene="RNF126"
                     /coded_by="XM_041480670.1:98..919"
                     /db_xref="GeneID:121360647"
ORIGIN      
        1 maeaspqpgr ffchccsaei aprlpdyicp rcesgfieel peeprnadne tssstsatdq
       61 srhpfenvdq hlftlppgyg qfafgffdds fefpfgsnvq pednrdsenr rerehqsrhr
      121 ygarqprarl aarrasgrhe gvptlegiiq qlvngiiapt tipnlglgpw gvlhsnpmdy
      181 awgangldai itqllnqfen tgpppadkek iqalptiqit qehvdsglec pvckedytvg
      241 envrqlpcnh lfhdgcivpw leqdrldlpt afs
//
LOCUS       XP_041336613             314 aa            linear   VRT 06-MAY-2021
DEFINITION  basigin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041336613
VERSION     XP_041336613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="basigin isoform X1"
                     /calculated_mol_wt=33377
     Region          163..249
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          174..177
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          186..191
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          214..218
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          229..234
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          242..245
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..314
                     /gene="BSG"
                     /coded_by="XM_041480679.1:16..960"
                     /db_xref="GeneID:121360664"
ORIGIN      
        1 mlsglsacpa gsdttlcpgk hpaqlcgecl gfgssaplaa chplgnvaaa lidprgltgw
       61 cwpcscalgs tgpeittgvs essgkvilsc nisaphltit ghkwihkekv leedsnsgal
      121 tsytiegkme ehsgiyecvf eanpqirgev nisvppqvta ykksehgneg dtgvltcknp
      181 sfpavttwtw hksghgrldn asgryiiksg gnktelrilk ldieqdtgdy fcnaanplgt
      241 gnatvslrvr srlaalwpfl givaevlvlv tiifiyekrr kpdevpdddd ggsaplksna
      301 tnhkdknvrq rnan
//
LOCUS       XP_041336620             270 aa            linear   VRT 06-MAY-2021
DEFINITION  basigin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041336620
VERSION     XP_041336620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="basigin isoform X2"
                     /calculated_mol_wt=28867
     Region          119..205
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          130..133
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          142..147
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          170..174
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          185..190
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          198..201
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..270
                     /gene="BSG"
                     /coded_by="XM_041480686.1:77..889"
                     /db_xref="GeneID:121360664"
ORIGIN      
        1 maagaagtra llallvlcsm aagaagtspe ittgvsessg kvilscnisa phltitghkw
       61 ihkekvleed snsgaltsyt iegkmeehsg iyecvfeanp qirgevnisv ppqvtaykks
      121 ehgnegdtgv ltcknpsfpa vttwtwhksg hgrldnasgr yiiksggnkt elrilkldie
      181 qdtgdyfcna anplgtgnat vslrvrsrla alwpflgiva evlvlvtiif iyekrrkpde
      241 vpddddggsa plksnatnhk dknvrqrnan
//
LOCUS       XP_041336632             556 aa            linear   VRT 06-MAY-2021
DEFINITION  polypyrimidine tract-binding protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336632
VERSION     XP_041336632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="polypyrimidine tract-binding protein 1 isoform
                     X1"
                     /calculated_mol_wt=59873
     Region          58..556
                     /region_name="hnRNP-L_PTB"
                     /note="hnRNP-L/PTB/hephaestus splicing factor family;
                     TIGR01649"
                     /db_xref="CDD:273733"
     CDS             1..556
                     /gene="PTBP1"
                     /coded_by="XM_041480698.1:159..1829"
                     /db_xref="GeneID:121360679"
ORIGIN      
        1 mdgivqditv gtkraaeelf spcvttngpf imssnspsaa ngndskkfkg dnrsagipsr
       61 vihvrklpsd vteaevislg lpfgkvtnll mlkgknqafi emnteetant mvnyyttvtp
      121 vlrsqpiyiq fsnhkelktd nspnqaraqa alqavtqvqa gavalaataa avdagmamag
      181 qspvlriive nlfypvtldv lhqifskfgt vlkiitftkn hqfqallqya dpmsaqhakl
      241 sldgqniyna cctlridfsk ltslnvkynn dksrdytrpd lpsgdsqptl dqtmaaafga
      301 pgiisppyag agfpptfaip qatgltvpsv pgalaplaip aaaaaaaagr iaipglsgtg
      361 hsvllvsnli pervtpqclf ilfgvygdvq rvkilfnkkd nalvqmadgn qaqlamshln
      421 gqklhgkpir itlskhqtvq lprenqedhg ltkdygtspl hrfkkpgskn fqnifppsat
      481 lhlsnippsv teedlkllfs snggmvkgfk ffqkdrkmal iqmgsveeai qslidlhnhd
      541 lgenhhlrvs fsksti
//
LOCUS       XP_041336642             525 aa            linear   VRT 06-MAY-2021
DEFINITION  polypyrimidine tract-binding protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336642
VERSION     XP_041336642.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480708.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..525
                     /product="polypyrimidine tract-binding protein 1 isoform
                     X2"
                     /calculated_mol_wt=56580
     Region          27..525
                     /region_name="hnRNP-L_PTB"
                     /note="hnRNP-L/PTB/hephaestus splicing factor family;
                     TIGR01649"
                     /db_xref="CDD:273733"
     CDS             1..525
                     /gene="PTBP1"
                     /coded_by="XM_041480708.1:180..1757"
                     /db_xref="GeneID:121360679"
ORIGIN      
        1 mssnspsaan gndskkfkgd nrsagipsrv ihvrklpsdv teaevislgl pfgkvtnllm
       61 lkgknqafie mnteetantm vnyyttvtpv lrsqpiyiqf snhkelktdn spnqaraqaa
      121 lqavtqvqag avalaataaa vdagmamagq spvlriiven lfypvtldvl hqifskfgtv
      181 lkiitftknh qfqallqyad pmsaqhakls ldgqniynac ctlridfskl tslnvkynnd
      241 ksrdytrpdl psgdsqptld qtmaaafgap giisppyaga gfpptfaipq atgltvpsvp
      301 galaplaipa aaaaaaagri aipglsgtgh svllvsnlip ervtpqclfi lfgvygdvqr
      361 vkilfnkkdn alvqmadgnq aqlamshlng qklhgkpiri tlskhqtvql prenqedhgl
      421 tkdygtsplh rfkkpgsknf qnifppsatl hlsnippsvt eedlkllfss nggmvkgfkf
      481 fqkdrkmali qmgsveeaiq slidlhnhdl genhhlrvsf sksti
//
LOCUS       XP_041336655            1115 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 18 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336655
VERSION     XP_041336655.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480721.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1115
                     /product="rho guanine nucleotide exchange factor 18
                     isoform X1"
                     /calculated_mol_wt=125709
     Region          207..401
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(213,217,324,352..353,356..357,359..360,363..364,
                     367..368,371,397,401)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          441..559
                     /region_name="PH_ARHGEF18"
                     /note="Rho guanine nucleotide exchange factor 18
                     Pleckstrin homology (PH) domain; cd15794"
                     /db_xref="CDD:275437"
     Region          <742..>900
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1115
                     /gene="ARHGEF18"
                     /coded_by="XM_041480721.1:16..3363"
                     /db_xref="GeneID:121360688"
ORIGIN      
        1 mgntnskssg rsnaipahpe lsfcgsfsrk wnenvfldne lltskilsvl rphserglra
       61 gelqctphfl stnsifasla tslkeqprsl llgadgtpal srnlgmtiaq rghsqpslnt
      121 agavnkfgli sgdmdegdsg fvkfkqtsdd vislapstad sifledaysv slrseietda
      181 hefeaeswsv aveqpyakrq rkdvikrqdv iyelmqtemh hvrtlkimlk vyskamreel
      241 qfsnavinkl fpcvdellem hgqfllqlke rrkesleegs drnyiiqnig dllvkqfsge
      301 ngermkekyg vfccghneav shykdllqsn kkfqnlikki gncsivrrlg vqecillvtq
      361 ritkypvlve riiqnteagt rdyeeliqal glikdtithv damvnecekg qrlkeimhkm
      421 elkssgkckn gllfrkddmg qrrllldgml ywkaasgrlk dilavlltdv llllqekdqk
      481 ytfasvdskp pvislqkliv revaneekam flisaslkgp emyeihtssk eernswmahi
      541 rravescpde eggtfnepea errqaearaa klkdfqerln mkdelilqsl tekqqiylem
      601 sevngfedhs qgsrarlllr gdisenlqge ailksavtea enlqdfifth fgsascqped
      661 gsglprraet fggydsspsi ssksgrknsg gdqrqwdwrg palssdvqlh dpssdaeegs
      721 qtsdgtrldd ssgaqptves qlvhriqtll rllfslqavi sqqdsyievq ratmadrekq
      781 yrlqstrgnl lleqekqrnf ekqreelmnv qklqsqlkle qqrlerersr qqrefeltea
      841 rlqeraeemr qlqerlsqdr eelerqreay qhdlerlrea qravekerer ldqlrklkkq
      901 ntvsgtfspe mgqsqmishs msfngegvep saagskssvr vssvagleyl ersdlarrds
      961 ttlenrpslk nevpihllsa tnqiqkpaav qqqiptklat ftkgskekgg knkashrtds
     1021 sasvdqkqll pprlagreea vlrgrrsasp slpssqtaaf qpelygptda qpealssasa
     1081 tlfkpnnvqv qplvpsqpnl lnvqddtske dviff
//
LOCUS       XP_041336665            1010 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 18 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336665
VERSION     XP_041336665.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480731.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1010
                     /product="rho guanine nucleotide exchange factor 18
                     isoform X2"
                     /calculated_mol_wt=114373
     Region          102..296
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(108,112,219,247..248,251..252,254..255,258..259,
                     262..263,266,292,296)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          336..454
                     /region_name="PH_ARHGEF18"
                     /note="Rho guanine nucleotide exchange factor 18
                     Pleckstrin homology (PH) domain; cd15794"
                     /db_xref="CDD:275437"
     Region          <637..>795
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1010
                     /gene="ARHGEF18"
                     /coded_by="XM_041480731.1:326..3358"
                     /db_xref="GeneID:121360688"
ORIGIN      
        1 mtiaqrghsq pslntagavn kfglisgdmd egdsgfvkfk qtsddvisla pstadsifle
       61 daysvslrse ietdahefea eswsvaveqp yakrqrkdvi krqdviyelm qtemhhvrtl
      121 kimlkvyska mreelqfsna vinklfpcvd ellemhgqfl lqlkerrkes leegsdrnyi
      181 iqnigdllvk qfsgengerm kekygvfccg hneavshykd llqsnkkfqn likkigncsi
      241 vrrlgvqeci llvtqritky pvlveriiqn teagtrdyee liqalglikd tithvdamvn
      301 ecekgqrlke imhkmelkss gkckngllfr kddmgqrrll ldgmlywkaa sgrlkdilav
      361 lltdvllllq ekdqkytfas vdskppvisl qklivrevan eekamflisa slkgpemyei
      421 htsskeerns wmahirrave scpdeeggtf nepeaerrqa earaaklkdf qerlnmkdel
      481 ilqsltekqq iylemsevng fedhsqgsra rlllrgdise nlqgeailks avteaenlqd
      541 fifthfgsas cqpedgsglp rraetfggyd sspsissksg rknsggdqrq wdwrgpalss
      601 dvqlhdpssd aeegsqtsdg trlddssgaq ptvesqlvhr iqtllrllfs lqavisqqds
      661 yievqratma drekqyrlqs trgnllleqe kqrnfekqre elmnvqklqs qlkleqqrle
      721 rersrqqref eltearlqer aeemrqlqer lsqdreeler qreayqhdle rlreaqrave
      781 kererldqlr klkkqntvsg tfspemgqsq mishsmsfng egvepsaags kssvrvssva
      841 gleylersdl arrdsttlen rpslknevpi hllsatnqiq kpaavqqqip tklatftkgs
      901 kekggknkas hrtdssasvd qkqllpprla greeavlrgr rsaspslpss qtaafqpely
      961 gptdaqpeal ssasatlfkp nnvqvqplvp sqpnllnvqd dtskedviff
//
LOCUS       XP_041336674            1010 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 18 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336674
VERSION     XP_041336674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1010
                     /product="rho guanine nucleotide exchange factor 18
                     isoform X2"
                     /calculated_mol_wt=114373
     Region          102..296
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(108,112,219,247..248,251..252,254..255,258..259,
                     262..263,266,292,296)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          336..454
                     /region_name="PH_ARHGEF18"
                     /note="Rho guanine nucleotide exchange factor 18
                     Pleckstrin homology (PH) domain; cd15794"
                     /db_xref="CDD:275437"
     Region          <637..>795
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1010
                     /gene="ARHGEF18"
                     /coded_by="XM_041480740.1:323..3355"
                     /db_xref="GeneID:121360688"
ORIGIN      
        1 mtiaqrghsq pslntagavn kfglisgdmd egdsgfvkfk qtsddvisla pstadsifle
       61 daysvslrse ietdahefea eswsvaveqp yakrqrkdvi krqdviyelm qtemhhvrtl
      121 kimlkvyska mreelqfsna vinklfpcvd ellemhgqfl lqlkerrkes leegsdrnyi
      181 iqnigdllvk qfsgengerm kekygvfccg hneavshykd llqsnkkfqn likkigncsi
      241 vrrlgvqeci llvtqritky pvlveriiqn teagtrdyee liqalglikd tithvdamvn
      301 ecekgqrlke imhkmelkss gkckngllfr kddmgqrrll ldgmlywkaa sgrlkdilav
      361 lltdvllllq ekdqkytfas vdskppvisl qklivrevan eekamflisa slkgpemyei
      421 htsskeerns wmahirrave scpdeeggtf nepeaerrqa earaaklkdf qerlnmkdel
      481 ilqsltekqq iylemsevng fedhsqgsra rlllrgdise nlqgeailks avteaenlqd
      541 fifthfgsas cqpedgsglp rraetfggyd sspsissksg rknsggdqrq wdwrgpalss
      601 dvqlhdpssd aeegsqtsdg trlddssgaq ptvesqlvhr iqtllrllfs lqavisqqds
      661 yievqratma drekqyrlqs trgnllleqe kqrnfekqre elmnvqklqs qlkleqqrle
      721 rersrqqref eltearlqer aeemrqlqer lsqdreeler qreayqhdle rlreaqrave
      781 kererldqlr klkkqntvsg tfspemgqsq mishsmsfng egvepsaags kssvrvssva
      841 gleylersdl arrdsttlen rpslknevpi hllsatnqiq kpaavqqqip tklatftkgs
      901 kekggknkas hrtdssasvd qkqllpprla greeavlrgr rsaspslpss qtaafqpely
      961 gptdaqpeal ssasatlfkp nnvqvqplvp sqpnllnvqd dtskedviff
//
LOCUS       XP_041336686            1073 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336686
VERSION     XP_041336686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480752.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1073
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1073
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 10"
                     /calculated_mol_wt=119291
     Region          40..184
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          243..458
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(396..397,400,406)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          473..541
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          554..604
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          <605..676
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          678..789
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          800..855
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          859..915
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          919..973
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          978..1024
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1039..1071
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1073
                     /gene="ADAMTS10"
                     /coded_by="XM_041480752.1:433..3654"
                     /db_xref="GeneID:121360700"
ORIGIN      
        1 matawrlltw tvtlglaggt fpgfpfqsqe eflssldhye iafpiqvdqn gdfltfdmrr
       61 qlkprprrsl pyepseqqvf ykvsahhtqf llnltlhsnl laehftveyw krdgmdwqhd
      121 fhedchyagh lqdqylsskv aisncnglhg vivadeeeyf ieplspganv smggegkgsp
      181 hvvykrsslq yphmdaacgv ldekpwkgrh wwlrtlkpsp lkppgnhsqr gqlplkrsvs
      241 teryvetlvv adkmmvgyhg rrdieqyila imnivaklfq dsslgnivni lvtrlillte
      301 dqptleinhh agksldsfck wqksivnrng ngnaipengi anhdtavlit rydiciyknk
      361 pcgtlglapv ggmcerersc sinediglat aftiaheigh tfgmnhdgvg nscgsrgqet
      421 aklmaahitm ktnpfvwstc srdyitsfld sgmglclnna ppkqdfiypt vapgqaydad
      481 eqcrfqygvk srqckygevc selwclsksn rcitnsipaa egticqtnti dkgwcykrec
      541 vpfgtrpegv dgawgswssw gecsrtcggg vsssvrhcds prptiggkyc lgerkryrsc
      601 ntdvrgvkac slnclaegfn fyteraaavv dgtpcrqdsn dicvngeckh vgcdrvlgsd
      661 skedkcrvcg gdgsscetie gvfnqslpeg gyeeviqipk gsvhidirel nlsinylalr
      721 gdsgeyfing klsidpprrf diagttfhyr rspeepesle algptnitlf vmvlvrtepq
      781 girykfnapv grdgsslysw hytpwtkcsv lcaggsqiqs vvcrklsdgs tvpnhfcsad
      841 tkvperqrsc ntepcppawa ignwsecsrs cnegvrtrsv fckrkisase ektlddasct
      901 qprpkmlepc nnqtcppewv aldwsectps cgpgfrhriv lcksgdhsvt lptsqcheat
      961 kpptsmrcnl rrcppprwvt gewgecsaqc glgqqrrsvq clahtgqpsm ecvealqppg
     1021 mqqcetkces gptdnpeeck dvnkvaycpl vlkfkfcsrt yfrqmccktc qgh
//
LOCUS       XP_041336695             404 aa            linear   VRT 06-MAY-2021
DEFINITION  la-related protein 6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041336695
VERSION     XP_041336695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480761.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="la-related protein 6-like"
                     /calculated_mol_wt=43916
     Region          78..154
                     /region_name="LARP_6"
                     /note="La RNA-binding domain of La-related protein 6;
                     cd08033"
                     /db_xref="CDD:153402"
     Site            order(84,87..88,93,96..97,99,120..122)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153402"
     Region          182..266
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..404
                     /gene="LOC121360707"
                     /coded_by="XM_041480761.1:1..1215"
                     /db_xref="GeneID:121360707"
ORIGIN      
        1 mssrgsglpl gldaqpscst pvpvprnsll arplpapwsc slallgqedt vescrgssce
       61 lgvallepsc pgpdpqlvrr ivaqvefyls denlakdafl lkhvqknkmg fvsiklltsf
      121 kkvkyltrdw rltlyalkfs sllevnkegt kvrrrlpipe yllsvppskl llawelqpre
      181 qdlplqknfl dtitrmfspf gaiasirllr pgrklpsdvr rysarfpell srccalveye
      241 slesargaae slghrdwhgi rvvrlcgkgg rkkageeraa wkappasltf prsledslle
      301 pddasgslsp llsrellapt wpggdfapgn ssgfpgsllp plgagtesrp ggswtpwgsg
      361 lypkapsshg qgvseplslw dgvlphrpeg sgssfgrgel vlrr
//
LOCUS       XP_041336708            1039 aa            linear   VRT 06-MAY-2021
DEFINITION  insulin receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041336708
VERSION     XP_041336708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480774.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1039
                     /product="insulin receptor"
                     /calculated_mol_wt=116996
     Region          35..145
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          <178..>334
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          298..>341
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          524..607
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(596..597,599..600)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          603..649
                     /region_name="Insulin_TMD"
                     /note="Insulin receptor trans-membrane segment; pfam17870"
                     /db_xref="CDD:465543"
     Region          673..960
                     /region_name="PTKc_InsR"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Insulin Receptor; cd05061"
                     /db_xref="CDD:133192"
     Site            order(689..690,694,712,714,761,763,767,816,820..821,834,
                     849,851..853,855..856,865..866,868,899)
                     /site_type="active"
                     /db_xref="CDD:133192"
     Site            order(689..690,694,712,714,761,763,767,820..821,823,834)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:133192"
     Site            order(703..706,784,786,826..827,952,957)
                     /site_type="other"
                     /note="PTP1B noncatalytic binding site [polypeptide
                     binding]"
                     /db_xref="CDD:133192"
     Site            order(820,849,851..853,855..856,865..866,868,899)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:133192"
     Site            833..858
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:133192"
     Site            order(840,842..843,845..846)
                     /site_type="other"
                     /note="APS (SH2 domain) interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133192"
     CDS             1..1039
                     /gene="INSR"
                     /coded_by="XM_041480774.1:1..3120"
                     /db_xref="GeneID:121360714"
ORIGIN      
        1 mclhctpcag pcpkvcdfgk ektidsvtsa qelrgctvln gslvinirgg nniaaelean
       61 lglieeisgy lkirrsyalv slsffrklhl irgetleagn ysfyaldnqn lrqlwdwskh
      121 nltiargklf fhynpklcls eihkmeeisg tkgrqerndi alktngdqas cenellkfss
      181 irtshdkill kwepywppdf rdllgfmlfy keapyqnvte fdgqdacgsn swtvvdvdpp
      241 prsnepkaqa qpgwllrglk pwtqyavfvk tlvtfsderr tygakseiiy vqtnatvpsv
      301 pldpisvsns ssqiilkwkp psepngnith ylvywqqqae dselyeldyc lkglklpsrt
      361 wsppfesedp qkynqseaed vsgeccscpk tdsqiqkele esafrktfen ylhnevfvpr
      421 psrkrrdlgs vanatvvlpt ipsspnnsaa aegaeeqkpf ekvlskeslv isglrhftgy
      481 rielhacnhd aqesrcsvaa yvsartmpea kaddivgpvs helvekntvh lkwqepkepn
      541 glivlyevny grlgeteeah fcvsrkhfas eggcrlrglq pgnysvrira tslagngswt
      601 eptyfyvady lnaqpniavi ivpiifaiii agiigaayvl vkkrqtegpt gplyassnpe
      661 yisasdvyvp dewevprdki tllrelgqgs fgmvyegiak divkgepetr vavktvnesa
      721 slreriefln easvmkgfsc hhvvrllgvv skgqptlvvm elmahgdlks ylrslrpeae
      781 nnpgrppptl remiqmaaei adgmaylnak kfvhrdlaar ncmvaedftv kigdfgmtrd
      841 iyetdyyrkg gkgllpvrwm apeslkdgvf ttysdvwsfg vvlweissla eqpyqglsne
      901 qvlkfvmdgg yldqpdncpe rlhslmqmcw qynpkmrptf ieiiemlked lhpsfhevsf
      961 fyseenkple teeyemdfen mesipldpss ysqrdkalgr dngpsmalkg nyeehipyth
     1021 mnggkkngri lsmprssps
//
LOCUS       XP_041336720             190 aa            linear   VRT 06-MAY-2021
DEFINITION  insulin receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041336720
VERSION     XP_041336720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480786.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="insulin receptor-like"
                     /calculated_mol_wt=21682
     Region          15..127
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          142..>180
                     /region_name="Furin-like"
                     /note="Furin-like cysteine rich region; pfam00757"
                     /db_xref="CDD:395614"
     CDS             1..190
                     /gene="LOC121360723"
                     /coded_by="XM_041480786.1:12..584"
                     /db_xref="GeneID:121360723"
ORIGIN      
        1 mdirnnltrl nmlenctvie ghlqillmfk tkpedfrels fpkltmitdy lllfrvygle
       61 slkglfpnlt virgthlffn yalvifemvh lkeiglynlm nitrgavrie knnelcylst
      121 idwsrildsv ednyivankd dkeecgdvcp gtvkgksncp ptvingifie rcwthdrcqr
      181 esgaaqsspa
//
LOCUS       XP_041336731             468 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 35 member E1 [Pyrgilauda ruficollis].
ACCESSION   XP_041336731
VERSION     XP_041336731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480797.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="solute carrier family 35 member E1"
                     /calculated_mol_wt=51400
     Region          101..392
                     /region_name="TPT"
                     /note="Triose-phosphate Transporter family; pfam03151"
                     /db_xref="CDD:308657"
     CDS             1..468
                     /gene="SLC35E1"
                     /coded_by="XM_041480797.1:1..1407"
                     /db_xref="GeneID:121360733"
ORIGIN      
        1 mkralhhpll paryspilyp grryaflalv lkvgsdrpga cepatfapsl prrcagqgpa
       61 lppwrrlrcp erraggagrs gaggagaarg grgpalrega rvsalclawy glsaggnvvn
      121 klllggfprp vtvslfhilg lcgllppllr awrvppagpa qlppraypry ilplafgkyf
      181 asvsahvslw rvpvsyahtv katmpiwvvl lsriimkekq ttkvylslip iitgvllatv
      241 telsfdmwgl isalaatlcf slqnifskkv lrdsrihhlr llnilgchav ffmiptwvlv
      301 dlssflvend lssmshwswt lmlliisgfc nfaqnviafs ilnlisplsy svanatkrim
      361 vitvslimlr npvtstnvlg mmtailgvfl ynktkydanq eakkqqllpv ttgdlvnler
      421 hrnppeksqn glaafgdfqy grsnlltehf qhsrqsypaa ynlnrfdi
//
LOCUS       XP_041336741             780 aa            linear   VRT 06-MAY-2021
DEFINITION  scaffold attachment factor B2 [Pyrgilauda ruficollis].
ACCESSION   XP_041336741
VERSION     XP_041336741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480807.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..780
                     /product="scaffold attachment factor B2"
                     /calculated_mol_wt=89441
     Region          33..67
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          34..>176
                     /region_name="PLN03124"
                     /note="poly [ADP-ribose] polymerase; Provisional"
                     /db_xref="CDD:215591"
     Region          255..330
                     /region_name="RRM_SAFB1_SAFB2"
                     /note="RNA recognition motif (RRM) found in scaffold
                     attachment factor B1 (SAFB1), scaffold attachment factor
                     B2 (SAFB2), and similar proteins; cd12679"
                     /db_xref="CDD:410080"
     CDS             1..780
                     /gene="SAFB2"
                     /coded_by="XM_041480807.1:7..2349"
                     /db_xref="GeneID:121360744"
ORIGIN      
        1 maeshspagl gepaslagpg vpgsesesrr rplselrvid lraelrqrnl dsggnksvlm
       61 erlrkaieee ggnpdeipvv senimkktpk rsskgrrade egvednglee dsgdgqddme
      121 asldnlqdid mmdisvldea eidngnavdc gddysahnil dslsdskena daevkefpdq
      181 paeyavgnle aspqfseike esreipivmv gishvygirv fflkfiyfwi kypvedkdtk
      241 tvtkdekgrv gsgsgrnlwv sglssstrat dlknlfskyg kvvgakvvtn arspgarcyg
      301 fvtmstseea tkcinhlhrt elhgkmisve kaknepagkk psdkkegetr kekdrhhsad
      361 skseksvgvk keekmdkkdd akksekdeke gkekdeqktg ssdrsrasks asrgtertvv
      421 mdkskgepvi svktsasker stksqdrkse skekqdilsf dkikeqrere rqrqrereir
      481 eterrrerer rdreqrlaai herderqrlq rererlefqr qrldrerler erlerermhi
      541 eqerrreqer iqrereelrr qqeqlryeqe rrsamrrpyd pdsrrdepyw peakrlaled
      601 ryhsdfgrqd rfhdfdhrdr gryqehcldr rdctrgipdr dgqhypderh ggperhsrds
      661 wggygsdrrm segrgippqt rdgrdwgdhg rkleghqdrt wqgnvaggvm grdherwqgg
      721 drsmpgqsgp ghgmtrggts grggfagsqg qavqgsgvpg lfaaperppr pseprfsrry
//
LOCUS       XP_041336754             763 aa            linear   VRT 06-MAY-2021
DEFINITION  scaffold attachment factor B1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041336754
VERSION     XP_041336754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480820.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="scaffold attachment factor B1-like"
                     /calculated_mol_wt=88022
     Region          31..65
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          32..>184
                     /region_name="PLN03124"
                     /note="poly [ADP-ribose] polymerase; Provisional"
                     /db_xref="CDD:215591"
     Region          252..327
                     /region_name="RRM_SAFB1_SAFB2"
                     /note="RNA recognition motif (RRM) found in scaffold
                     attachment factor B1 (SAFB1), scaffold attachment factor
                     B2 (SAFB2), and similar proteins; cd12679"
                     /db_xref="CDD:410080"
     CDS             1..763
                     /gene="LOC121360747"
                     /coded_by="XM_041480820.1:18..2309"
                     /db_xref="GeneID:121360747"
ORIGIN      
        1 maesqsaagl gdftslsgaa tfgsepetrr lselrvidlr aelkrrnlds ggnksvlmer
       61 lrkaieeegg dpdeipvase lttkrmpkrt skgrkpeeeg vedngleens rdgqediean
      121 ldtlqdidmm disvldeaei dnssavdcge dyspdnilds lsdnkdnvea emkelpdqlt
      181 eneedydeie nnleasssdl iemkkmeklh lepvqytkvc frlqhifcpv eedrdtkiis
      241 kdekgrsags sgrnfwvsgl asttratdlk nlfskygkvv gakvvtnars pgarcygfvt
      301 mstaeeatkc ithlhktelh gkiisvekak nepagkktse kkeseakret vserpggakr
      361 deksdqkddp kktedkdeke kkdkddqksg ssdqpktiks gskgtertvv mdkskgepvi
      421 svktsttskd rsvksqdrks esrerqgivp fdkikaqrkm reaeqrrtre rrerqqhlqt
      481 irereererl eiarerleie rqrlererme rerlerermh ieherrreqd riqrereelr
      541 rqheqlryeq errsamrrpy didgrrddpy wpeakrmamn dryhsdfsrq drfhdfdhrd
      601 rgryqehsid rrdgsrtimg drdgqhypde rhggpdrhsr dsreswgsyg sdrrmsesrg
      661 ippqsrdgrd wgdhsrkfeg hqdrswqssv dggmigrdhe rwqgggrgrp ghvmhrggms
      721 grgsfmqggn qsqimhgggm qgegfagqer anrpndprfn rry
//
LOCUS       XP_041336766             363 aa            linear   VRT 06-MAY-2021
DEFINITION  TLE family member 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041336766
VERSION     XP_041336766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480832.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 37% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="TLE family member 5"
                     /calculated_mol_wt=37861
     Region          184..298
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     CDS             1..363
                     /gene="TLE5"
                     /coded_by="XM_041480832.1:1..1092"
                     /db_xref="GeneID:121360755"
ORIGIN      
        1 magraglgad ppvtgrgrae rgaaasprpl rargwatpgg qglggrwdgd tgrarapdva
       61 agpaplgaas gcperagpdl rgasaaqpad pgspaleteq geagasagrp capgsgrvpr
      121 saaslpaels warpghgrcp rrglgprcge sgagsglggp ggrrlrpqrc lllfkgsshl
      181 pqqlkfttsd scdrikdefq llqaqyhslk lecdklasek semqrhyvmy yemsyglnie
      241 mhkqaeivkr lngicaqvlp ylsqehqqqv lgaierakqv tapelnsiir qqlqahqlsq
      301 lqalalpltp lpvglqppsl pavsagtgll slsalgsqah lskedknghd gdahqdddge
      361 ksd
//
LOCUS       XP_041336776            1149 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041336776
VERSION     XP_041336776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480842.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1149
                     /product="DNA-directed RNA polymerase, mitochondrial"
                     /calculated_mol_wt=129873
     Region          314..1149
                     /region_name="PHA00452"
                     /note="T3/T7-like RNA polymerase"
                     /db_xref="CDD:222797"
     Region          747..1149
                     /region_name="RNA_pol"
                     /note="DNA-dependent RNA polymerase; pfam00940"
                     /db_xref="CDD:460006"
     CDS             1..1149
                     /gene="POLRMT"
                     /coded_by="XM_041480842.1:112..3561"
                     /db_xref="GeneID:121360763"
ORIGIN      
        1 mggqgtsaag tergerrrar gccgpapgdg gvrlwpdprr aelgperrgs aglpcspgsa
       61 tartlrrvpg sdpprrgrhg rqgersaaal hhgscssarr dsrsrrapwr ggacaaarga
      121 rgpgmsllrl ravlrgpggl rgpgipwrif rsyssastke kanrngpcer tellegecwe
      181 rctglqgeme llcdrlfsil easglqpnld syavalqcmg rnqsppkail rylqklnssg
      241 fhvdelfqkc lfeedekemv lwairtvqpn yqlppppspk ickssllqdf ysremmgsyp
      301 kvdfsekelq erfqqqleme lkntvtiesv eaakpltpqa ikarellgtl rsqwhdailq
      361 alqnskrsma rpkrlskysi lypylcllpd eeyvdimlqi lndlspqges lavlarelgt
      421 kvydryiiqr klrsgqlekv qkiyenyiql lakdsqpkhy lpreyweklv aeagfgpsln
      481 lttcswpcvl lmrlgmhmle llvkavkvpr nilsrrlesk pipvlyhvys fysnwqvgli
      541 rphpifsqlv snaaetmltf nssampmlcp pvpwtspsfg afvlndtklm rfmdettyhq
      601 llleqcplvn lhpvldalnq lgncawkinq pvldiiisif ndkgdekldi ppplseapkp
      661 ptppgnsstw sktfkhevfl ckkkaaemhs lrmdalykls ianyvrdkvf wfphnmdfrg
      721 rtypcppyfn hlgndvtrai llfaegrplg pkgldwlkih linltglkkk nalqerleya
      781 neimedilds adhpltgrkw wmdtdepwqa laccmeiaka srspdpaayi shfpvhqdgs
      841 cnglqhyaal grdlsgaasv nlvpcglpqd vysavaqqve efrkkdaerg lkiaqvlqgf
      901 isrkvvkqtv mtvvygvtry ggrlqiekrl keidefpeey lweashylvk qvfnsikemf
      961 satrdiqnwl tesakliaqs grtvewvtpl glpiiqpyyr srstvlncgm qrlsvktsns
     1021 tqkpdtvkqk nafppnfihs ldsthmmlta lhclrkgltf vsvhdcywth altvdvmnqv
     1081 crqqfvalhs ekilqdlsef mlekycssss sstepiahwq krlmeqlsnv pktgefnlkq
     1141 vmdstyffs
//
LOCUS       XP_041336785             316 aa            linear   VRT 06-MAY-2021
DEFINITION  serine protease 57 [Pyrgilauda ruficollis].
ACCESSION   XP_041336785
VERSION     XP_041336785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480851.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="serine protease 57"
                     /calculated_mol_wt=34083
     Region          77..303
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            77
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(117,165,260)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(254,275,278)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..316
                     /gene="PRSS57"
                     /coded_by="XM_041480851.1:1..951"
                     /db_xref="GeneID:121360774"
ORIGIN      
        1 mgklpqeaps hpplgnlpaa glspwtdlst ptpsspsggg sgpvcatmvt aglfilslgg
       61 sillpalasa gtqgsqiigg kaaaphsrpf masiqmdgeh vcggflvwpk wvmtaahcfi
      121 prrspsvrvv lgaqrlqepe esqqifsvve siahplynlr aadndirllr lnrsatlnky
      181 vkrirlpsph idlkpgtvcs vmgwgdtsnf gdqptelmet nttivkrnlc rtlwrgkvsa
      241 nmlcgasrdt tlqgvctgds ggplvfkdkv hgivsfsger cgdrrfpdiy tkisnyidwv
      301 hhvvrrfrpr egwlkp
//
LOCUS       XP_041336798             278 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-1(I) chain-like [Pyrgilauda ruficollis].
ACCESSION   XP_041336798
VERSION     XP_041336798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480864.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..278
                     /product="collagen alpha-1(I) chain-like"
                     /calculated_mol_wt=27745
     CDS             1..278
                     /gene="LOC121360784"
                     /coded_by="XM_041480864.1:1..837"
                     /db_xref="GeneID:121360784"
ORIGIN      
        1 maaaaaaarg rpgrhrttap daprappggg karcaawpyg ncsprrppsa vvlgggarsa
       61 papkgsrtpg pcpplpapgv pdtasptqpq lspfgslgth ggdtrrghta sqrelelgsp
      121 regpdtregd evppgpqrpq grcrrggerd pcpggsrssg arrgppgpsv sppppppcgq
      181 pgdgaalgmt herhpsrsgd thatsggaat cppslpgapn aappelprpg glprrrgwgc
      241 lwppataarc hpgsgagisp prpalatgtr hrlggfrs
//
LOCUS       XP_041336810             392 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type IV-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336810
VERSION     XP_041336810.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480876.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="calcium/calmodulin-dependent protein kinase type
                     IV-like"
                     /calculated_mol_wt=43532
     Region          21..306
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,81,97..100,143,147..148,150,
                     163..164)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270987"
     CDS             1..392
                     /gene="LOC121360792"
                     /coded_by="XM_041480876.1:1..1179"
                     /db_xref="GeneID:121360792"
ORIGIN      
        1 mpssksesdf widgshreaa ledfyivgpe lgrgatsvvf scqekgtgap yaakilkkti
       61 dkkivrteig vllrlshpni iklkeifetp seialvlelv tggelfdriv ergfyserda
      121 ahvvkqilea vsylhqngvv hrdlkpenll yadlspdapl kigdfglski vdeqdtmktv
      181 cgtpgycape ilhgcpygpe vdmwsvgvit yillcgfepf fdprgdqymy griltcdyef
      241 vspwwdevsp nakdlvrkli vldpqkrltv qqalqhpwvt gkaakfahmd stqrklqefn
      301 arrklkvsgd prhrrgrvta qpgdncpqpr pgraercqhh lgvcsvavfq sdhpavfqsd
      361 hppvfqsdhp pvfqsdhptv apvavpgagc ds
//
LOCUS       XP_041336822            2345 aa            linear   VRT 06-MAY-2021
DEFINITION  adenomatous polyposis coli protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041336822
VERSION     XP_041336822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480888.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2345
                     /product="adenomatous polyposis coli protein 2"
                     /calculated_mol_wt=254189
     Region          6..57
                     /region_name="APC_N_CC"
                     /note="Coiled-coil N-terminus of APC, dimerization domain;
                     pfam16689"
                     /db_xref="CDD:435517"
     Region          121..199
                     /region_name="Suppressor_APC"
                     /note="Adenomatous polyposis coli tumour suppressor
                     protein; pfam11414"
                     /db_xref="CDD:463275"
     Region          343..432
                     /region_name="APC_rep"
                     /note="Adenomatous polyposis coli (APC) repeat; pfam18797"
                     /db_xref="CDD:465870"
     Region          431..474
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          482..519
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          528..561
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(552,556,560,599,603,607,644,648,652)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          569..610
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          615..655
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          619..653
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          657..695
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          661..695
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          698..980
                     /region_name="Arm_APC_u3"
                     /note="Armadillo-associated region on APC; pfam16629"
                     /db_xref="CDD:435476"
     Region          1074..>1092
                     /region_name="APC_r"
                     /note="APC repeat; pfam05923"
                     /db_xref="CDD:461781"
     Region          1373..1393
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1671..1689
                     /region_name="SAMP"
                     /note="SAMP Motif; pfam05924"
                     /db_xref="CDD:461782"
     Region          1847..2175
                     /region_name="APC_basic"
                     /note="APC basic domain; pfam05956"
                     /db_xref="CDD:428690"
     Region          2053..>2329
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..2345
                     /gene="APC2"
                     /coded_by="XM_041480888.1:1..7038"
                     /db_xref="GeneID:121360801"
ORIGIN      
        1 msgsiasydq lvrqvealkk enshlrrele dnsnhlskle netsdmkevl khlqgkleqe
       61 arvmvssgqt evldqlkalq mditslynlk fapeatsggr gaeesppapg phrdgpgelg
      121 ratfrmleel drercfllge iekeekekvw yyaqlqslat rldelphvet fsmqmdlirq
      181 qlqfeaqhir slmeerfgta demvqraqir asrleqidke lmeaqdkaqq pepqlcgkvp
      241 gmegdgsldp pthpeeggnt kvevvfwlls mlatrdkedm srtllamsss qesclamrks
      301 gclplliqil hdsdgepgpp esptgakdar mranaalhni vfsqpdegqa kkemrvlhvl
      361 eqirsysetc wdwlqmqsrd gargpegagr ggreprvlgg agsivlpiep qicqatcaim
      421 klsfdeeyrr amnelgglqa vaellqvdye mhkmtndpln lalrryagma ltnltfgdvv
      481 nkatlcsrrg cmeaivaqlg sdseelhqvv ssilrnlswr adinskkvlr evgsvtglmr
      541 calhagkest lksvlsalwn lsahstenka aicgvegalg flvstltykc qsnslaiies
      601 gggilrnvss lvatredyrq vlrdhnclqt llqhlrshsl tivsnacgtl wnlsarsprd
      661 qellwdlgav smlrnlihsk hkmiamgsaa alrnlltnrp pkykdaavvs pgscmpslym
      721 rkqkaleael dakhlaetfd tmekqslkgq sakkpmrhme slvkdyasds gcfdddevpn
      781 istgvetasa svlsmflnss flqgqalpra laqrrcpepe kdgsgkaaep kkpplpeddv
      841 slaaeklank isstvakidk lvedistmhn ssddsfslss edhcldwqyg pedghearaq
      901 scspcrlsda ggfakresls rahtllrlkt aytslstdsl nsgstsdgyc tkehmkpcpr
      961 aafldyrdel qryqkrpsrl dlksilgkpe raepparepp ptdphvrtik lspsyqhvpm
     1021 letlakssta aghqpsllgr kqawlppall qaaeplskip eklpaqppas aeqesvqkys
     1081 vedtpicfsr csslsslssa dnvldgqshs endldsdssl eilemeegda egedgkqeke
     1141 kvvdtgpttp vgisqpitip fpkrdkvflr easpsrqedl tpssssenyi qetplvmsrc
     1201 ssvsslgsfe spsiassiqs dpcsemisgt ispselpdsp gqtmppsrsk tplfelgcqp
     1261 eketsqfniq wennvkkfme itdfkerfql pqdldsmvyf tvekpnenfs casslsalpl
     1321 hehyvqkdve lkliptfpek nslnfaahek reerreeryl egrrraerpe ppddddieil
     1381 kecissamps rfrkvktsll sgqvlhpqtk kplhvpvyml vpahthpgdd dsftdsadgt
     1441 pvnfssaasl sdetlrypag eeaehplaer rrqpgtipar raasgssapa rlgsagkgka
     1501 gpgreegkrg qtlpkgaasl elgvgrasga pgrkdealed gvvfqslcht tpteeavycf
     1561 ydpdldelpe agrdgsgsra qpgraprrer wggsvpqkdp epgsrpaktk pqnnliadet
     1621 ppcyslsssm sslsdanlse geergqpcgk aawprsaavg qaqggspssp slnseddllq
     1681 kcigsampkr rrpaarrrlv erkqkppgag grerkaearh hpeedagsdr gsdldsvewq
     1741 aiqegansiv twlhqaaasl srepssesds ilsfmsglsv gstlqlslgr qdkqrpgsas
     1801 grdparrehs kgrperkdaa garpaarass raerspapsk pvpnlpvvfr grtviympsl
     1861 akdapsprat pkktpaakpe appaknlsls qqrsrslhrl gkapetgela lpkrsttppa
     1921 rigkgppssg ssrtstpsqh apkklpspsq asgsssppgp pgrapaprsp apkqsktqks
     1981 pvripfmqkp srkvlpgrga mpvleeqvdg skarpggpgg srlnlvrmss arssgsdsdr
     2041 sgflrqltfi kessslllrh rsdlspappa tslprrgspq rsraalpavf lcssrcdelk
     2101 aakpatpgqr plipraqpgg katagakppr rtssespsrl pvkssvpaae pfkryssspn
     2161 isvarraasp ssvrseaaar rrqnepapgg pqgkppvvvm kgtwrrirde diphilkstl
     2221 pssalplags gdeeppgtpg tprktsdavv qtedfatskt nsstsptlet regpphprat
     2281 gdgeapapak aalpisfghe apagtfpgsr hgspskaarv tpfnyvpspm avtavadkav
     2341 ekiqa
//
LOCUS       XP_041336835             775 aa            linear   VRT 06-MAY-2021
DEFINITION  ADAMTS-like protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041336835
VERSION     XP_041336835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480901.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..775
                     /product="ADAMTS-like protein 5"
                     /calculated_mol_wt=83503
     Region          181..278
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          296..392
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          586..759
                     /region_name="NIF"
                     /note="NLI interacting factor-like phosphatase; pfam03031"
                     /db_xref="CDD:397254"
     Site            order(590..594,598..599,658..661,665,698,714..715,
                     717..719)
                     /site_type="active"
                     /db_xref="CDD:319823"
     CDS             1..775
                     /gene="ADAMTSL5"
                     /coded_by="XM_041480901.1:546..2873"
                     /db_xref="GeneID:121360809"
ORIGIN      
        1 mslpcvtsqh rlwrvphppg whqtphplpg dpragsglgp rltpvplagv pegarrwprl
       61 gsdaglgdss vppscpwgwl rallrrswrl lllawlslvg taqdpalgtp arvpeppapa
      121 rpqgtwgswg pwsscssscg dgvalrsrrc lrtseeqpct gdprqyrlcq lqgcpsgsvp
      181 framqcslyd nrpvlgtsar yrwvpfhgap nlcdlnclae ghnfyysfgr vldgtrcspg
      241 spdlcvggrc lsvgcdgilg sgsrpdacgl cgsghgscvl vhrlfqgsdp ssgylgyvnv
      301 tkipagathi kvtdksrnyl almasdgryv lngdwaiawp gpyeaagtll tysrapdgte
      361 sleapgpthe dlhvmallqe pnpgieyqfw lprghpqlgr gdtsplrqpq prgagspppp
      421 epphtpappq pprpggfate ppprippgqs qdgaaaamag lgatprtkkp predqglstp
      481 raaargraes rqregehvpr gwarvpsspt tpgkgrlvrr gpegspgpge sdparppapp
      541 cpggsffsgl pevehqdpav paapslpspg altpvrgrgr rklqhtlvle ldgtllyssl
      601 lshgqkdata tfttdfqass ykvhvklrph vqefleslsk tyelmqrpsp slcqifiytt
      661 akkdyakkll evldpkkkli rrcfsqsdcv csqgcywkdl thlgrdlart valdhtmqgf
      721 paqaanwiqv ppwagdpede ellrlipvlg qlgqaedvrp eiqrrfqpch lpaed
//
LOCUS       XP_041336848            1353 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 1S [Pyrgilauda ruficollis].
ACCESSION   XP_041336848
VERSION     XP_041336848.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480914.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1353
                     /product="microtubule-associated protein 1S"
                     /calculated_mol_wt=145499
     Region          <565..>628
                     /region_name="tolA"
                     /note="cell envelope integrity inner membrane protein
                     TolA; Provisional; PRK09510"
                     /db_xref="CDD:236545"
     Region          811..>1209
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1353
                     /gene="MAP1S"
                     /coded_by="XM_041480914.1:1..4062"
                     /db_xref="GeneID:121360813"
ORIGIN      
        1 mgdrewesha avgegvrewe rcgdgraldp pvvatpeipe pleddgwrir gmrgapqipn
       61 fslgffssag irswdidltc cnldeqlklf vsrhsatfss ivkgqrtlhh rgdvletlvl
      121 lnpsdkslcd elrnlitdvs qhkllvfagp cvedtgelml qtgcfslrdf iqiftdkevg
      181 eilssadpsa karltiscpd fgewrdsgle hhnlqdfiel rynpgcvlpe megleefmey
      241 lseslepqsp fdllepptmv gflklskpcc yifpggrgds affavngfnv lvnggsnpks
      301 sfwklvrhld ridsilvtha gtdslpgins llqrklaele edpsqssqgn gdwaknlisp
      361 elgvvflnas eklkdiegds kvlkscdeaa ltlhyldklg irpnllards gpraeptvlf
      421 qkmgvgrldm yvlnpvkgtk elefllqhws gngfpkeqel plqcltsvcv llvwhpvsrs
      481 ekiirvlfpg ctpqarileg lekvkhlefl khpvvtkndl kgtaqaekpl kqrraeskes
      541 lksgsklslv eaaapapkek apkvekkevk agtkekpksl gdaartgsee ekakdarakp
      601 dsaaekakgd aklkpnkeka apkkelmakk eekkplkkde gaeakaeakk evkvvkkeak
      661 aetlrkdskd gkaeakapak aparkapvpe srkplakags ikksplkkep ekpkakttrk
      721 epgmsdgsks sspeemlpes eqggrrrkee stdegiatad seleplslen ggnrrpgvpg
      781 dpsclengle dpespqrlrh lessplravc ppspmaktpk sdrsvnfdlt ptgllnhgpe
      841 gaedpcgsse ektlemmspa ssgpasaght pfhqspvedg aeepgtgaar qqgawpaaaa
      901 gkegsapdkq agclslspfk ddvpdvspti ttpslpaevg sphstevdes lsvsfeqvlp
      961 pvsesppeeg rrsrasgdap epeatkggls lplrpchhpp wadgdaatrp grrsdsphdv
     1021 dlclvspcef ehpksersps aaasprelsd sdpsqelvpp rgrpgetppt svseslptls
     1081 dsdvppated cpsiladgle sdedserppr gvaracdplp aplkdpcplp aqpgicmvdp
     1141 ealppgrkep pgtrvkrtps rvgsapaapk aepprvpasa tkarppasaa gdkarpplgd
     1201 kkgpssgapg nargasarpa tgagraspag araaapqgpp vyvdlaylpg swsartvdee
     1261 ffrriralcy vvsgddhlke gvlrplldal lagkhqwgid iqvtliptfd slvmhewyqe
     1321 therqqelgi tvlgsnstva mqdetfpack vef
//
LOCUS       XP_041336860            1047 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase JAK3 [Pyrgilauda ruficollis].
ACCESSION   XP_041336860
VERSION     XP_041336860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480926.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1047
                     /product="tyrosine-protein kinase JAK3"
                     /calculated_mol_wt=116492
     Region          26..123
                     /region_name="FERM_F1"
                     /note="FERM F1 ubiquitin-like domain; pfam18379"
                     /db_xref="CDD:465733"
     Region          133..252
                     /region_name="FERM_F2"
                     /note="FERM F2 acyl-CoA binding protein-like domain;
                     pfam18377"
                     /db_xref="CDD:436450"
     Region          319..396
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(320,340,365,367)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(366,394)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          458..718
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(464..467,470,472,492,494,523,538..541,585,589..590,
                     592,610..611)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271110"
     Region          757..1039
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(768..771,774,776,793,795,824,842..845,889,893..894,
                     896,906..907)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270665"
     CDS             1..1047
                     /gene="JAK3"
                     /coded_by="XM_041480926.1:599..3742"
                     /db_xref="GeneID:121360822"
ORIGIN      
        1 maplgketpl iggrscslss aesgtlqvfl yhrapappra pgsaagtlsf tfgeytaeel
       61 cvraakacgv lpvchplfal atedlscwfp pnhvftvdes hsqvvvyrlr fffpnwcglg
      121 qshrfqllng waspvldypv idylfaqsrs dfiggrvavg lslptqeqcl slavldmlri
      181 areqrqspaq vcshvsyksc lpaplrsqiq qhnfvtrkrl rlrfgkslrr lggcqadgph
      241 lklkylldle rlqrhrseei fhvrspgsaa piaihvsgdg gvawscggse virggwgghg
      301 graqgvspsv taavpalgsa efavskleaa ggapglfllr rspqdfdsyl ltvcvqtrsg
      361 rdykrcricr dedghwwlsg varrfcslre llgtyghrgl qaegapmrle racpprpkek
      421 snllivrsgi pcppgsppvp rrrslhqmmf hkidpqsltr geslgqgsft qiykgvkreq
      481 deedgarqtp vvlkvmdgsh rnclesflea astmsqlshk hlvllhgvsl gkdsvmvqeh
      541 vrhgpldlyl rkkrgavttg wrltvakqla yalnyledkk iphgnvsakk vllaregdma
      601 ggsppfikln dpgvsvtvla qdmlveripw vapecvsdpg slalpadkwg fgatlweifs
      661 ggnmplslle pqkklefyrs rqqlpaprwp elaalvaqcm eyepprrpcf ralirdlnsl
      721 itsdyellsd lspadvtlrd gfwgrdslam sqdpehfqer hlkyisllgk gnfgsvelcr
      781 ydplgdstge lvavkklqqd sakeirdfer eiqilhslqh dfivryrgvc ysrgmrglrl
      841 vmeflpngcl rdflqknqpr lehrtlllya wqickgmeyl gaqrcvhrdl asrnilvesd
      901 shvkigdfgl akllpqdkdy yvvrepgqsp vfwyapesla dnifscasdt wsfgvllyel
      961 ftyssksksp seeflrmmgt arppqiichl lellkdnrrl papagcpsev yalmmscwaf
     1021 tpgarptfge lspkiealrd grsktrg
//
LOCUS       XP_041336873             603 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/iodide cotransporter [Pyrgilauda ruficollis].
ACCESSION   XP_041336873
VERSION     XP_041336873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480939.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..603
                     /product="sodium/iodide cotransporter"
                     /calculated_mol_wt=63476
     Region          18..528
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(68,71,353,356..357)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..603
                     /gene="SLC5A5"
                     /coded_by="XM_041480939.1:1..1812"
                     /db_xref="GeneID:121360829"
ORIGIN      
        1 mpapqgpqdv reltfspwdy gvfalmllis taiglfhgla kggqktsedf ftggrrmsal
       61 pvglslsasf msaiqvlgvp aeafrygakf lwmclaqiin saltaqlflp vfyrlgltst
      121 yeylerrfsr svrlcgtvqy vvatmfytgi viyapaliln qvtgldiwas llstgvictf
      181 yttiggmkav iwtdvfqvlv mlagfvaiav rgallaggpa evlsiasngs rlnfadfspd
      241 prrrytvwtf vlggtllwls mygvnqaqvq ryvacrsere akmallvnqv gllcivasav
      301 acglvmfaly grcdpllaga iaapdqympy lvldifgstp gvpglflaca ysgtlstast
      361 sinamaavtv edlvrprlpa lsprrltlis kglsltfgts citvaalssl lgggvlqavl
      421 gglavglals lwvavgatly ppsaatmgvl ptwgtlcppr nvtnatsats gpalpapppe
      481 plrpavpchs pailgdfysv sylyygalgt lgtvgtgall sllpgparqs rcpqgvlwwd
      541 ivratpsgvp kgdstpgded kdkdkdkded kaavtqalle rpdgegtpps dpprggtvte
      601 sdv
//
LOCUS       XP_041336887             298 aa            linear   VRT 06-MAY-2021
DEFINITION  trimeric intracellular cation channel type A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336887
VERSION     XP_041336887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="trimeric intracellular cation channel type A"
                     /calculated_mol_wt=33204
     Region          43..226
                     /region_name="TRIC"
                     /note="TRIC channel; pfam05197"
                     /db_xref="CDD:461583"
     CDS             1..298
                     /gene="TMEM38A"
                     /coded_by="XM_041480953.1:155..1051"
                     /db_xref="GeneID:121360836"
ORIGIN      
        1 mdlaealplg elaaafaalp vfplfdtayf iisvlylkye pgavemsrks pfaswlcaml
       61 hcfgsyilad lllgeapigy fshnssvila tavwyliffc pmnlfykcvs flpvklifva
      121 mkevvrvrki aagvhhahhl yhhgwfvmma tgwlkgsgva lmsnfeqllr gvwkpetnei
      181 lhmsfptkas lygtvlftlq qthwlpisea nliffftmfm ivckvfmtat hshaspfapl
      241 enlvcpvlfg svssghpshh hdhhgpshev shppppppak skeelnegtr krkakkae
//
LOCUS       XP_041336900              75 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041336900
VERSION     XP_041336900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..75
                     /product="small integral membrane protein 7"
                     /calculated_mol_wt=8592
     CDS             1..75
                     /gene="SMIM7"
                     /coded_by="XM_041480966.1:68..295"
                     /db_xref="GeneID:121360844"
ORIGIN      
        1 migdlllcgt llvnagavln frlrrrdteg fgeeqreptt gdnireflls lryfrifial
       61 wnifmmfcmi vlfgs
//
LOCUS       XP_041336910             301 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein subunit alpha-11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336910
VERSION     XP_041336910.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480976.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="guanine nucleotide-binding protein subunit
                     alpha-11"
                     /calculated_mol_wt=35259
     Region          1..295
                     /region_name="G-alpha"
                     /note="Alpha subunit of G proteins (guanine nucleotide
                     binding); cd00066"
                     /db_xref="CDD:206639"
     Site            order(19,23,27,30,33..34,52,55,96,125,150,158,162)
                     /site_type="active"
                     /note="GoLoco binding site [active]"
                     /db_xref="CDD:206639"
     Site            123..131
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206639"
     Site            128
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206639"
     Site            order(129,131,133,144,146,150..152,154,157..158,160..163)
                     /site_type="other"
                     /note="beta - gamma complex interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            order(131,156,159..160,163)
                     /site_type="other"
                     /note="adenylyl cyclase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206639"
     Site            147..150
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206639"
     Site            148..164
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206639"
     Site            216..219
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206639"
     Site            order(264..275,277..280)
                     /site_type="active"
                     /note="putative receptor binding site [active]"
                     /db_xref="CDD:206639"
     Site            272..274
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206639"
     CDS             1..301
                     /gene="LOC121360852"
                     /coded_by="XM_041480976.1:36..941"
                     /db_xref="GeneID:121360852"
ORIGIN      
        1 mriihgsgys eedkkgftkl vyqniftamq smirametlk ilykyeqnka navlirevdv
       61 ekvmtfeqpy vsaiktlwnd pgiqecydrr reyqlsdsak yylsdvdria tpgylptqqd
      121 vlrvrvpttg iieypfdlen iifrmvdvgg qrserrkwih cfenvtsimf lvalseydqv
      181 lvesdnenrm eeskalfrti itypwfqnss vilflnkkdl ledkilyshl vdyfpefdgp
      241 qrdaqaaref ilkmfvdlnp dsdkiiyshf tcatdtenir fvfaavkdti lqlnlkeynl
      301 v
//
LOCUS       XP_041336924             492 aa            linear   VRT 06-MAY-2021
DEFINITION  hippocampus abundant transcript 1 protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336924
VERSION     XP_041336924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480990.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="hippocampus abundant transcript 1 protein-like"
                     /calculated_mol_wt=52750
     Region          37..450
                     /region_name="MFS_MFSD14"
                     /note="Major facilitator superfamily domain-containing 14A
                     and 14B; cd17387"
                     /db_xref="CDD:340945"
     Site            order(47..48,51..52,55,89,137..138,140..142,145,164,
                     167..168,171,253,256..257,260..262,265,293,297,346..347,
                     351,355,371,374..375,378..379,382)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340945"
     CDS             1..492
                     /gene="LOC121360863"
                     /coded_by="XM_041480990.1:198..1676"
                     /db_xref="GeneID:121360863"
ORIGIN      
        1 mtgekkkkkr lnrsvllakk ivirdgagrq gigepsvyha vvvifleffa wgllttpmlt
       61 vlhqtfpqht flmnglihgv kgllsflsap ligalsdvwg rksfllltvf ftcapiplmk
      121 ispwwyfavi smsgvfavtf svifayvadi tqeherstay glvsatfaas lvtspaigay
      181 lsqaygdtlv vvlasgvall digfillavp eslpeemrpv swgapisweq adpfaslrkv
      241 gqdstvllic itvflsylpe agqyssffly lrqvigfsse tvaafigvvg ilsilaqtvv
      301 lgilmrsign kntillglgf qilqlawygf gsqpwmmwaa gavaamssit fpaisamvsr
      361 stdpdqqgvv qgmitgirgl cnglgpalyg fvfylfhvel nemaevetlg kaskpnmanp
      421 tdessiipgp pflfgacsvl lsllvalfip ehnlalrsgs hkkhsmgaqa hphsppaggs
      481 dgkeplleds sv
//
LOCUS       XP_041336931              68 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041336931
VERSION     XP_041336931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041480997.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..68
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-7"
                     /calculated_mol_wt=7478
     Region          7..68
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(7,10,14,17,21,26,28,31..32,35..36,39,48..49,59)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..68
                     /gene="GNG7"
                     /coded_by="XM_041480997.1:269..475"
                     /db_xref="GeneID:121360871"
ORIGIN      
        1 msttnniaqa rklveqlrie agierikvsk asselmnyce qharndpllv gvpasenpfk
       61 dkkpciil
//
LOCUS       XP_041336950            1075 aa            linear   VRT 06-MAY-2021
DEFINITION  paired amphipathic helix protein Sin3b [Pyrgilauda ruficollis].
ACCESSION   XP_041336950
VERSION     XP_041336950.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481016.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1075
                     /product="paired amphipathic helix protein Sin3b"
                     /calculated_mol_wt=124771
     Region          1..986
                     /region_name="Sin3"
                     /note="Histone deacetylase complex, regulatory component
                     SIN3 [Chromatin structure and dynamics]; COG5602"
                     /db_xref="CDD:227889"
     CDS             1..1075
                     /gene="SIN3B"
                     /coded_by="XM_041481016.1:111..3338"
                     /db_xref="GeneID:121360894"
ORIGIN      
        1 mkefksqsid tpgvirrvsq lfhehpdliv gfnaflplgy rieipkngkl siqsplnsqv
       61 ppepvpsalp gsglvlhysq enshnhsdcs eefrqqlpyk edksqiples dsvefnnais
      121 yvnkiktrfl dhpeiyrsfl eilhtyqkeq lntkgrpfrg mseeevftev anlfrgqedl
      181 lsefgqflpe akrslftgng pcevnsvqkt eheknlehsk krsrplllrp vsgpakkkmk
      241 lrgtkdlsva tvgkygtlqe fsffdkvrrv lksqevyenf lrcialfnqe lvsgsellql
      301 vtpflgkfpe lfaqfksflg vkelsfaspl sdrsgdgmsr eidyasckri gssyralpkt
      361 yqqpkcsgrt aickevlndt wvsfpswsed stfvsskktp yeeqlhrced erfeldvvle
      421 tnlatirvle svqkklsrlt qedqekfrld dclggtsevi qrraiyriyg dkapeiiesl
      481 kknpvtavpv vlkrlkakee ewreaqqgfn kiwreqyeka ylksldhqav nfkqndtkal
      541 rsksllneie svydehqeqh segrssstne phlifiyedk qiledaasli syyvkrqpti
      601 qkedqatirq ivhhfipelf fsqppehnis eestdedren hqgqnldtpe lrkkhvpgpp
      661 sspletkatf cdvtaaephn tlddvyslff vnnnwyfflr lhqtlcsrll kiyrqaqkql
      721 leyrtekere kllcegrkek tndpamelrl kqpsevelee yypafldmvr slldgnidpt
      781 qyedtlremf tihayigftm dklvqnivrq lhhlvsddic lkvvelylne rkrgaaggnl
      841 ssrcvraake tsyqwkaerc madencfkvm flqrkgqvim tielldteet qtedpvevqh
      901 lanymeqyvg vegapnnqnd gfllkpvflq rnlkkfrkwq ckqvralrse vksswkrlig
      961 vesacnvdcr fklnthkmmf imnsedymyr rgalcrakqv qpvvllkhhq qfeewhnrwl
     1021 eenvsmeavd vvqdwlmgde deemvpcktt cetvnvhgvp vnryrvqysr rpasp
//
LOCUS       XP_041336966             737 aa            linear   VRT 06-MAY-2021
DEFINITION  proprotein convertase subtilisin/kexin type 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041336966
VERSION     XP_041336966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="proprotein convertase subtilisin/kexin type 4"
                     /calculated_mol_wt=80069
     Region          42..118
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          124..413
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(126,173,219)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(164..165,200,205,247,265,275,306,317,379)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(164,205,379)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(312,342)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(320,322,325,327)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          492..578
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          590..>669
                     /region_name="VSP"
                     /note="Giardia variant-specific surface protein;
                     pfam03302"
                     /db_xref="CDD:146106"
     Region          644..>676
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     CDS             1..737
                     /gene="PCSK4"
                     /coded_by="XM_041481032.1:16..2229"
                     /db_xref="GeneID:121360896"
ORIGIN      
        1 maarpgpgpa lalslfpvll allvvaatal pspakprvyl sswavrvaag lrdaralarr
       61 hgllflgqvm egepfyhfsh rgtrqralsr hwgwhmrlsr dpqvlwfeqq tlkrrskrgt
      121 gvvptdpwfp kqwymnndih pdlniltaws rgytglgvvl tvlddglekd hpdlaanydp
      181 lasydfnsnd pdpqprysds dknwhgtrca gevaavanng icgagvayna kiggvrmldg
      241 simdiveaqa lslqpqyihi ysaswgpedd grtvdgpgvl aaaafhrgvv qgrgglgsif
      301 iwasgnggtn ydncncdgyt nsiytvsvgs vlgdghrply sescpailtt tyssrttskv
      361 qivttdlhhr ctdkhtgtsa saplaagmva laleanpalt wrdlqhliir askpahlqae
      421 dwaengvgrr vshyygygll dagllvqaat twtgtrpqek csvqavqvpr digskltist
      481 dvsscsksir slehvqvqls lsysrrgdlv valsspmgtt stlvtvrpyd tsqdgykdwt
      541 fmsthfwden pkgiwtlqle nrgdaqntgq lnsftlhlhg tdedmparrs aatatdeclr
      601 rdeqgacqdc gsslythhgs clsycppryy grarratprd talvcaschp scytcqgssa
      661 nnctscpsgh tfqdvthtcq qpaedspspa glhrhlvvvt vvacssllla gvlyptyrva
      721 frvgkaapcc prvrrte
//
LOCUS       XP_041336982             485 aa            linear   VRT 06-MAY-2021
DEFINITION  midnolin [Pyrgilauda ruficollis].
ACCESSION   XP_041336982
VERSION     XP_041336982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="midnolin"
                     /calculated_mol_wt=51816
     Region          26..95
                     /region_name="Ubl_midnolin"
                     /note="ubiquitin-like (Ubl) domain found in midnolin and
                     similar proteins; cd01804"
                     /db_xref="CDD:340502"
     CDS             1..485
                     /gene="MIDN"
                     /coded_by="XM_041481048.1:355..1812"
                     /db_xref="GeneID:121360897"
ORIGIN      
        1 mdpqpgarsc srgapacevg ppeppmnlyi htttgtryel svpaeetveg lkrrlsqrlk
       61 vpkerlallh kesrlssgkl qdlgvvegsk ltlvptveag lmsqasrpeq svmqaleslt
      121 etqvndflsg rspltlalrv gdhmmfvqlq laaqqstgql qhrhliasrg eagasasphc
      181 rtlhgasgsg faripvvpsc qqspapsptp sapappmycn aphaapvtag mfrshgastq
      241 tvnssvvssc sevdcgsrss sspgsspaps arsrkpgavi esfvnhapgv fsgtfsgtlh
      301 pncqdssgrp rrdigtilqi lndllsatrh yqgmpqsltq lrcqtqfsss sssssssspp
      361 aspdlatktt seplpaaaap tlhpvvqcqs qirmckpsgd rlrqtenrat rckverlqll
      421 lqqkrlrrka rrdarapyhw vpnrkagrtn snssvssegs ldldfedsvw kpevkaemks
      481 efvva
//
LOCUS       XP_041336996             306 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041336996
VERSION     XP_041336996.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481062.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=32288
     CDS             1..306
                     /gene="LOC121360902"
                     /coded_by="XM_041481062.1:796..1716"
                     /db_xref="GeneID:121360902"
ORIGIN      
        1 mrvpphprpf rlcvpaslgs ggsssrpapr avtsrrgllr cggrsppppr rsgpgpacvp
       61 rpplrgaras hakpissrar gspalpdpra prapllcagi mngsrrgara rggrgqggas
      121 aaawaggirp drpahratwg sctrlplaas advwalgelp laaaaggagv negeappagr
      181 cyivtslppr cshgsasggr fggsgpregg arrpprpspr prasprpqip rtesterrrg
      241 erkeaagrsr qrrfhhppfp rqppergeng rfsifflffi yiyffyflrl scgghgrcsp
      301 awgpps
//
LOCUS       XP_041337009             415 aa            linear   VRT 06-MAY-2021
DEFINITION  thimet oligopeptidase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337009
VERSION     XP_041337009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481075.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..415
                     /product="thimet oligopeptidase-like"
                     /calculated_mol_wt=47900
     Region          31..>415
                     /region_name="GluZincin"
                     /note="Gluzincin Peptidase family (thermolysin-like
                     proteinases, TLPs) which includes peptidases M1, M2, M3,
                     M4, M13, M32 and M36 (fungalysins); cl14813"
                     /db_xref="CDD:472708"
     CDS             1..415
                     /gene="LOC121360908"
                     /coded_by="XM_041481075.1:190..1437"
                     /db_xref="GeneID:121360908"
ORIGIN      
        1 mapptgnvvd sqaprplgcq lrwdltaeqi eamaaeltes tklvydrvga qergevsyen
       61 tlkaladvev eytvrrnmld fpqhvspcka iraasteadk klsefdvems mrqdvyqriv
      121 wlqekaesas lrpeakryle rliklgkrng lhlpeetqek ikaikkklsv lcidfnknln
      181 edttflpfsr eelgglpedf lnslektedg klkvtlkyph yfpllkkcyv petrrkveem
      241 fnsrckeenc lilkelvdlr aqkanllgfs thadfvlemn makssrtvat fldelaqklk
      301 plgekeravi ldlkkkecek rglefdnrin awdmryymnq veetkysvdq nllkeyfpmq
      361 vvttgllaiy qellgltfhl eekaqvwhed vqlytvkdas sgetigkfyl dlypr
//
LOCUS       XP_041337022            2215 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337022
VERSION     XP_041337022.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481088.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2215
                     /product="unconventional myosin-IXb isoform X1"
                     /calculated_mol_wt=252866
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..965
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            901..910
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(913..940,944..965)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <995..>1241
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1074..1495
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1678..1735
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1747..1932
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1784,1821,1825,1894,1897..1898,1923)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1784
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2215
                     /gene="MYO9B"
                     /coded_by="XM_041481088.1:224..6871"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrlsvld fsfdcsedfd inafqdiisf cenkkdmheq iiasikglpw
      781 qgddpcellr slsqlqhrsh llksrgvkqk qiipknllds kslklimsmt lhdrttksll
      841 hlhkkkkpps isaqfqtsln klletlgrae pffircirsn aekkemlfde slvlqqlryt
      901 gmletvrirr sgysakytfq efidqfqvll pknakasked icaylnklkl nenyyqigkt
      961 kvfmkeaerq ilqdtlhkev irkiillqsw lrmvlerrrf lrmrqaavvl qacwrsrcvr
     1021 malqrnnaai eiqaawrrhr qrkrflqlrr rlcllqalvr ghlqrkryqk mvlerqkaee
     1081 eqrevqeded keqdtskthn idedtskdeq sepatdelpv khesepdqav ededqaqneq
     1141 aenlssseka tlpqkqpves servtnsrek resrrqrgle hndlqnkhvl lsfegpsalc
     1201 heeqtvseea letapepeks taqednvlqg ssegekspse ekplsdtpps seikesgsvp
     1261 eqppgsdaed maadrmktqq nqnnqikgsq sftcperptd lalnvhntls atgsfqgpad
     1321 cwadrnrrqr atkdldspta aiqryvddpe klkykrekwk gkrqsdagqn dvlsqsldgr
     1381 irvdkspqdh lekkgssasl sdlstlvqtv amnqqspdpi eeekgnkkfp vqkkpsdhfp
     1441 aldtavpvqp asqqgdaksa fksplrrllg kkpdkkiake ssdvieegdg lslvscvlft
     1501 dtggtqkvse gssgqpgrpq agkesskakk nrtikiskis svsqnwrasm vreiananel
     1561 khldefllnk indlrsqksg veclffeate kfrgniktmy sapngqihvg ykdlvenyql
     1621 lvtnlakkre ekevklvlnl flslldefir gytkkeepeq pkqtkaqkkk rkqdraieeh
     1681 nghvftnyqv sirqscehcs syiwpmekac lcsvckltch kkcmskiqss ctscgkkgeq
     1741 daeprhfgvc vsaltserns vpmvmeklle yvemhglyte giyrksgsan rmkelkqllq
     1801 edpnsvklen ypihtitgil kqwlrelpdp lmtsaqyndf lravelpekq eqlcaiysvl
     1861 eqlpqanhnt lerlifhlvk valiedvnrm spnalaivfa pcllrcpdts dpltsmkdvs
     1921 kttmcvemli keqirkykik meeinqleaa esfafrrlsl lrqntlwpik lgfsspyegk
     1981 lskssqvkgn dsgtseldsv heeedvsean nrekeilidr iqsikeeked ityrlpeldq
     2041 rgsdeenvds etsastesll edkpgrvdte aiiglhccaq sssvpakdic qvpslpqtss
     2101 dsysaslasr rrysltlski kvprrtpvmp taniklppgm fkctesqdea fakeerqrvq
     2161 rreqparrtd sihsvyiaqg salahaqelg deyeptaklk rrfsdpyshi pcvek
//
LOCUS       XP_041337030            2214 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041337030
VERSION     XP_041337030.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481096.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2214
                     /product="unconventional myosin-IXb isoform X2"
                     /calculated_mol_wt=252738
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..965
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            901..910
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(913..940,944..965)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <995..>1241
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1074..1494
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1677..1734
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1746..1931
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1783,1820,1824,1893,1896..1897,1922)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1783
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2214
                     /gene="MYO9B"
                     /coded_by="XM_041481096.1:224..6868"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrlsvld fsfdcsedfd inafqdiisf cenkkdmheq iiasikglpw
      781 qgddpcellr slsqlqhrsh llksrgvkqk qiipknllds kslklimsmt lhdrttksll
      841 hlhkkkkpps isaqfqtsln klletlgrae pffircirsn aekkemlfde slvlqqlryt
      901 gmletvrirr sgysakytfq efidqfqvll pknakasked icaylnklkl nenyyqigkt
      961 kvfmkeaerq ilqdtlhkev irkiillqsw lrmvlerrrf lrmrqaavvl qacwrsrcvr
     1021 malqrnnaai eiqaawrrhr qrkrflqlrr rlcllqalvr ghlqrkryqk mvlerqkaee
     1081 eqrevqeded keqdtskthn idedtskdeq sepatdelpv khesepdqav ededqaqneq
     1141 aenlssseka tlpqkqpves servtnsrek resrrqrgle hndlqnkhvl lsfegpsalc
     1201 heeqtvseea letapepeks taqednvlqg ssegekspse ekplsdtpps seikesgsvp
     1261 eqppgsdaed maadrmktqq nqnnqikgsq sftcperptd lalnvhntls atgsfqgpad
     1321 cwadrnrrqr atkdldspta aiqryvddpe klkykrekwk gkrqsdagqn dvlsqsldgr
     1381 irvdkspqdh lekkgssasl sdlstlvqtv amnqspdpie eekgnkkfpv qkkpsdhfpa
     1441 ldtavpvqpa sqqgdaksaf ksplrrllgk kpdkkiakes sdvieegdgl slvscvlftd
     1501 tggtqkvseg ssgqpgrpqa gkesskakkn rtikiskiss vsqnwrasmv reiananelk
     1561 hldefllnki ndlrsqksgv eclffeatek frgniktmys apngqihvgy kdlvenyqll
     1621 vtnlakkree kevklvlnlf lslldefirg ytkkeepeqp kqtkaqkkkr kqdraieehn
     1681 ghvftnyqvs irqscehcss yiwpmekacl csvckltchk kcmskiqssc tscgkkgeqd
     1741 aeprhfgvcv saltsernsv pmvmeklley vemhglyteg iyrksgsanr mkelkqllqe
     1801 dpnsvkleny pihtitgilk qwlrelpdpl mtsaqyndfl ravelpekqe qlcaiysvle
     1861 qlpqanhntl erlifhlvkv aliedvnrms pnalaivfap cllrcpdtsd pltsmkdvsk
     1921 ttmcvemlik eqirkykikm eeinqleaae sfafrrlsll rqntlwpikl gfsspyegkl
     1981 skssqvkgnd sgtseldsvh eeedvseann rekeilidri qsikeekedi tyrlpeldqr
     2041 gsdeenvdse tsasteslle dkpgrvdtea iiglhccaqs ssvpakdicq vpslpqtssd
     2101 sysaslasrr rysltlskik vprrtpvmpt aniklppgmf kctesqdeaf akeerqrvqr
     2161 reqparrtds ihsvyiaqgs alahaqelgd eyeptaklkr rfsdpyship cvek
//
LOCUS       XP_041337039            2199 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041337039
VERSION     XP_041337039.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481105.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2199
                     /product="unconventional myosin-IXb isoform X3"
                     /calculated_mol_wt=251049
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..965
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            901..910
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(913..940,944..965)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <995..>1241
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1074..1495
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1678..1735
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1747..1932
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1784,1821,1825,1894,1897..1898,1923)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1784
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2199
                     /gene="MYO9B"
                     /coded_by="XM_041481105.1:224..6823"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrlsvld fsfdcsedfd inafqdiisf cenkkdmheq iiasikglpw
      781 qgddpcellr slsqlqhrsh llksrgvkqk qiipknllds kslklimsmt lhdrttksll
      841 hlhkkkkpps isaqfqtsln klletlgrae pffircirsn aekkemlfde slvlqqlryt
      901 gmletvrirr sgysakytfq efidqfqvll pknakasked icaylnklkl nenyyqigkt
      961 kvfmkeaerq ilqdtlhkev irkiillqsw lrmvlerrrf lrmrqaavvl qacwrsrcvr
     1021 malqrnnaai eiqaawrrhr qrkrflqlrr rlcllqalvr ghlqrkryqk mvlerqkaee
     1081 eqrevqeded keqdtskthn idedtskdeq sepatdelpv khesepdqav ededqaqneq
     1141 aenlssseka tlpqkqpves servtnsrek resrrqrgle hndlqnkhvl lsfegpsalc
     1201 heeqtvseea letapepeks taqednvlqg ssegekspse ekplsdtpps seikesgsvp
     1261 eqppgsdaed maadrmktqq nqnnqikgsq sftcperptd lalnvhntls atgsfqgpad
     1321 cwadrnrrqr atkdldspta aiqryvddpe klkykrekwk gkrqsdagqn dvlsqsldgr
     1381 irvdkspqdh lekkgssasl sdlstlvqtv amnqqspdpi eeekgnkkfp vqkkpsdhfp
     1441 aldtavpvqp asqqgdaksa fksplrrllg kkpdkkiake ssdvieegdg lslvscvlft
     1501 dtggtqkvse gssgqpgrpq agkesskakk nrtikiskis svsqnwrasm vreiananel
     1561 khldefllnk indlrsqksg veclffeate kfrgniktmy sapngqihvg ykdlvenyql
     1621 lvtnlakkre ekevklvlnl flslldefir gytkkeepeq pkqtkaqkkk rkqdraieeh
     1681 nghvftnyqv sirqscehcs syiwpmekac lcsvckltch kkcmskiqss ctscgkkgeq
     1741 daeprhfgvc vsaltserns vpmvmeklle yvemhglyte giyrksgsan rmkelkqllq
     1801 edpnsvklen ypihtitgil kqwlrelpdp lmtsaqyndf lravelpekq eqlcaiysvl
     1861 eqlpqanhnt lerlifhlvk valiedvnrm spnalaivfa pcllrcpdts dpltsmkdvs
     1921 kttmcvemli keqirkykik meeinqleaa esfafrrlsl lrqntskssq vkgndsgtse
     1981 ldsvheeedv seannrekei lidriqsike ekedityrlp eldqrgsdee nvdsetsast
     2041 eslledkpgr vdteaiiglh ccaqsssvpa kdicqvpslp qtssdsysas lasrrryslt
     2101 lskikvprrt pvmptanikl ppgmfkctes qdeafakeer qrvqrreqpa rrtdsihsvy
     2161 iaqgsalaha qelgdeyept aklkrrfsdp yshipcvek
//
LOCUS       XP_041337046            2185 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041337046
VERSION     XP_041337046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481112.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2185
                     /product="unconventional myosin-IXb isoform X4"
                     /calculated_mol_wt=249393
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..935
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            871..880
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(883..910,914..935)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <965..>1211
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1044..1465
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1648..1705
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1717..1902
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1754,1791,1795,1864,1867..1868,1893)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1754
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2185
                     /gene="MYO9B"
                     /coded_by="XM_041481112.1:224..6781"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrdmheq iiasikglpw qgddpcellr slsqlqhrsh llksrgvkqk
      781 qiipknllds kslklimsmt lhdrttksll hlhkkkkpps isaqfqtsln klletlgrae
      841 pffircirsn aekkemlfde slvlqqlryt gmletvrirr sgysakytfq efidqfqvll
      901 pknakasked icaylnklkl nenyyqigkt kvfmkeaerq ilqdtlhkev irkiillqsw
      961 lrmvlerrrf lrmrqaavvl qacwrsrcvr malqrnnaai eiqaawrrhr qrkrflqlrr
     1021 rlcllqalvr ghlqrkryqk mvlerqkaee eqrevqeded keqdtskthn idedtskdeq
     1081 sepatdelpv khesepdqav ededqaqneq aenlssseka tlpqkqpves servtnsrek
     1141 resrrqrgle hndlqnkhvl lsfegpsalc heeqtvseea letapepeks taqednvlqg
     1201 ssegekspse ekplsdtpps seikesgsvp eqppgsdaed maadrmktqq nqnnqikgsq
     1261 sftcperptd lalnvhntls atgsfqgpad cwadrnrrqr atkdldspta aiqryvddpe
     1321 klkykrekwk gkrqsdagqn dvlsqsldgr irvdkspqdh lekkgssasl sdlstlvqtv
     1381 amnqqspdpi eeekgnkkfp vqkkpsdhfp aldtavpvqp asqqgdaksa fksplrrllg
     1441 kkpdkkiake ssdvieegdg lslvscvlft dtggtqkvse gssgqpgrpq agkesskakk
     1501 nrtikiskis svsqnwrasm vreiananel khldefllnk indlrsqksg veclffeate
     1561 kfrgniktmy sapngqihvg ykdlvenyql lvtnlakkre ekevklvlnl flslldefir
     1621 gytkkeepeq pkqtkaqkkk rkqdraieeh nghvftnyqv sirqscehcs syiwpmekac
     1681 lcsvckltch kkcmskiqss ctscgkkgeq daeprhfgvc vsaltserns vpmvmeklle
     1741 yvemhglyte giyrksgsan rmkelkqllq edpnsvklen ypihtitgil kqwlrelpdp
     1801 lmtsaqyndf lravelpekq eqlcaiysvl eqlpqanhnt lerlifhlvk valiedvnrm
     1861 spnalaivfa pcllrcpdts dpltsmkdvs kttmcvemli keqirkykik meeinqleaa
     1921 esfafrrlsl lrqntlwpik lgfsspyegk lskssqvkgn dsgtseldsv heeedvsean
     1981 nrekeilidr iqsikeeked ityrlpeldq rgsdeenvds etsastesll edkpgrvdte
     2041 aiiglhccaq sssvpakdic qvpslpqtss dsysaslasr rrysltlski kvprrtpvmp
     2101 taniklppgm fkctesqdea fakeerqrvq rreqparrtd sihsvyiaqg salahaqelg
     2161 deyeptaklk rrfsdpyshi pcvek
//
LOCUS       XP_041337053            2178 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041337053
VERSION     XP_041337053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481119.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2178
                     /product="unconventional myosin-IXb isoform X5"
                     /calculated_mol_wt=248618
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..928
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            864..873
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(876..903,907..928)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <958..>1204
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1037..1458
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1641..1698
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1710..1895
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1747,1784,1788,1857,1860..1861,1886)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1747
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2178
                     /gene="MYO9B"
                     /coded_by="XM_041481119.1:224..6760"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrlsvld fsfdcsedfd inafqdiisf cenkkksrgv kqkqiipknl
      781 ldskslklim smtlhdrttk sllhlhkkkk ppsisaqfqt slnklletlg raepffirci
      841 rsnaekkeml fdeslvlqql rytgmletvr irrsgysaky tfqefidqfq vllpknakas
      901 kedicaylnk lklnenyyqi gktkvfmkea erqilqdtlh kevirkiill qswlrmvler
      961 rrflrmrqaa vvlqacwrsr cvrmalqrnn aaieiqaawr rhrqrkrflq lrrrlcllqa
     1021 lvrghlqrkr yqkmvlerqk aeeeqrevqe dedkeqdtsk thnidedtsk deqsepatde
     1081 lpvkhesepd qavededqaq neqaenlsss ekatlpqkqp vesservtns rekresrrqr
     1141 glehndlqnk hvllsfegps alcheeqtvs eealetapep ekstaqednv lqgssegeks
     1201 pseekplsdt ppsseikesg svpeqppgsd aedmaadrmk tqqnqnnqik gsqsftcper
     1261 ptdlalnvhn tlsatgsfqg padcwadrnr rqratkdlds ptaaiqryvd dpeklkykre
     1321 kwkgkrqsda gqndvlsqsl dgrirvdksp qdhlekkgss aslsdlstlv qtvamnqqsp
     1381 dpieeekgnk kfpvqkkpsd hfpaldtavp vqpasqqgda ksafksplrr llgkkpdkki
     1441 akessdviee gdglslvscv lftdtggtqk vsegssgqpg rpqagkessk akknrtikis
     1501 kissvsqnwr asmvreiana nelkhldefl lnkindlrsq ksgveclffe atekfrgnik
     1561 tmysapngqi hvgykdlven yqllvtnlak kreekevklv lnlflsllde firgytkkee
     1621 peqpkqtkaq kkkrkqdrai eehnghvftn yqvsirqsce hcssyiwpme kaclcsvckl
     1681 tchkkcmski qssctscgkk geqdaeprhf gvcvsaltse rnsvpmvmek lleyvemhgl
     1741 ytegiyrksg sanrmkelkq llqedpnsvk lenypihtit gilkqwlrel pdplmtsaqy
     1801 ndflravelp ekqeqlcaiy svleqlpqan hntlerlifh lvkvaliedv nrmspnalai
     1861 vfapcllrcp dtsdpltsmk dvskttmcve mlikeqirky kikmeeinql eaaesfafrr
     1921 lsllrqntlw piklgfsspy egklskssqv kgndsgtsel dsvheeedvs eannrekeil
     1981 idriqsikee kedityrlpe ldqrgsdeen vdsetsaste slledkpgrv dteaiiglhc
     2041 caqsssvpak dicqvpslpq tssdsysasl asrrrysltl skikvprrtp vmptaniklp
     2101 pgmfkctesq deafakeerq rvqrreqpar rtdsihsvyi aqgsalahaq elgdeyepta
     2161 klkrrfsdpy shipcvek
//
LOCUS       XP_041337061            2168 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041337061
VERSION     XP_041337061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481127.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2168
                     /product="unconventional myosin-IXb isoform X6"
                     /calculated_mol_wt=247448
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..935
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            871..880
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(883..910,914..935)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <965..>1211
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1044..1464
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1647..1704
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1716..1901
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1753,1790,1794,1863,1866..1867,1892)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1753
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2168
                     /gene="MYO9B"
                     /coded_by="XM_041481127.1:224..6730"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrdmheq iiasikglpw qgddpcellr slsqlqhrsh llksrgvkqk
      781 qiipknllds kslklimsmt lhdrttksll hlhkkkkpps isaqfqtsln klletlgrae
      841 pffircirsn aekkemlfde slvlqqlryt gmletvrirr sgysakytfq efidqfqvll
      901 pknakasked icaylnklkl nenyyqigkt kvfmkeaerq ilqdtlhkev irkiillqsw
      961 lrmvlerrrf lrmrqaavvl qacwrsrcvr malqrnnaai eiqaawrrhr qrkrflqlrr
     1021 rlcllqalvr ghlqrkryqk mvlerqkaee eqrevqeded keqdtskthn idedtskdeq
     1081 sepatdelpv khesepdqav ededqaqneq aenlssseka tlpqkqpves servtnsrek
     1141 resrrqrgle hndlqnkhvl lsfegpsalc heeqtvseea letapepeks taqednvlqg
     1201 ssegekspse ekplsdtpps seikesgsvp eqppgsdaed maadrmktqq nqnnqikgsq
     1261 sftcperptd lalnvhntls atgsfqgpad cwadrnrrqr atkdldspta aiqryvddpe
     1321 klkykrekwk gkrqsdagqn dvlsqsldgr irvdkspqdh lekkgssasl sdlstlvqtv
     1381 amnqspdpie eekgnkkfpv qkkpsdhfpa ldtavpvqpa sqqgdaksaf ksplrrllgk
     1441 kpdkkiakes sdvieegdgl slvscvlftd tggtqkvseg ssgqpgrpqa gkesskakkn
     1501 rtikiskiss vsqnwrasmv reiananelk hldefllnki ndlrsqksgv eclffeatek
     1561 frgniktmys apngqihvgy kdlvenyqll vtnlakkree kevklvlnlf lslldefirg
     1621 ytkkeepeqp kqtkaqkkkr kqdraieehn ghvftnyqvs irqscehcss yiwpmekacl
     1681 csvckltchk kcmskiqssc tscgkkgeqd aeprhfgvcv saltsernsv pmvmeklley
     1741 vemhglyteg iyrksgsanr mkelkqllqe dpnsvkleny pihtitgilk qwlrelpdpl
     1801 mtsaqyndfl ravelpekqe qlcaiysvle qlpqanhntl erlifhlvkv aliedvnrms
     1861 pnalaivfap cllrcpdtsd pltsmkdvsk ttmcvemlik eqirkykikm eeinqleaae
     1921 sfafrrlsll rqntskssqv kgndsgtsel dsvheeedvs eannrekeil idriqsikee
     1981 kedityrlpe ldqrgsdeen vdsetsaste slledkpgrv dteaiiglhc caqsssvpak
     2041 dicqvpslpq tssdsysasl asrrrysltl skikvprrtp vmptaniklp pgmfkctesq
     2101 deafakeerq rvqrreqpar rtdsihsvyi aqgsalahaq elgdeyepta klkrrfsdpy
     2161 shipcvek
//
LOCUS       XP_041337070            2148 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041337070
VERSION     XP_041337070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2148
                     /product="unconventional myosin-IXb isoform X7"
                     /calculated_mol_wt=245145
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..898
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            834..843
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(846..873,877..898)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <928..>1174
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1007..1428
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1611..1668
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1680..1865
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1717,1754,1758,1827,1830..1831,1856)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1717
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2148
                     /gene="MYO9B"
                     /coded_by="XM_041481136.1:224..6670"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrksrgv kqkqiipknl ldskslklim smtlhdrttk sllhlhkkkk
      781 ppsisaqfqt slnklletlg raepffirci rsnaekkeml fdeslvlqql rytgmletvr
      841 irrsgysaky tfqefidqfq vllpknakas kedicaylnk lklnenyyqi gktkvfmkea
      901 erqilqdtlh kevirkiill qswlrmvler rrflrmrqaa vvlqacwrsr cvrmalqrnn
      961 aaieiqaawr rhrqrkrflq lrrrlcllqa lvrghlqrkr yqkmvlerqk aeeeqrevqe
     1021 dedkeqdtsk thnidedtsk deqsepatde lpvkhesepd qavededqaq neqaenlsss
     1081 ekatlpqkqp vesservtns rekresrrqr glehndlqnk hvllsfegps alcheeqtvs
     1141 eealetapep ekstaqednv lqgssegeks pseekplsdt ppsseikesg svpeqppgsd
     1201 aedmaadrmk tqqnqnnqik gsqsftcper ptdlalnvhn tlsatgsfqg padcwadrnr
     1261 rqratkdlds ptaaiqryvd dpeklkykre kwkgkrqsda gqndvlsqsl dgrirvdksp
     1321 qdhlekkgss aslsdlstlv qtvamnqqsp dpieeekgnk kfpvqkkpsd hfpaldtavp
     1381 vqpasqqgda ksafksplrr llgkkpdkki akessdviee gdglslvscv lftdtggtqk
     1441 vsegssgqpg rpqagkessk akknrtikis kissvsqnwr asmvreiana nelkhldefl
     1501 lnkindlrsq ksgveclffe atekfrgnik tmysapngqi hvgykdlven yqllvtnlak
     1561 kreekevklv lnlflsllde firgytkkee peqpkqtkaq kkkrkqdrai eehnghvftn
     1621 yqvsirqsce hcssyiwpme kaclcsvckl tchkkcmski qssctscgkk geqdaeprhf
     1681 gvcvsaltse rnsvpmvmek lleyvemhgl ytegiyrksg sanrmkelkq llqedpnsvk
     1741 lenypihtit gilkqwlrel pdplmtsaqy ndflravelp ekqeqlcaiy svleqlpqan
     1801 hntlerlifh lvkvaliedv nrmspnalai vfapcllrcp dtsdpltsmk dvskttmcve
     1861 mlikeqirky kikmeeinql eaaesfafrr lsllrqntlw piklgfsspy egklskssqv
     1921 kgndsgtsel dsvheeedvs eannrekeil idriqsikee kedityrlpe ldqrgsdeen
     1981 vdsetsaste slledkpgrv dteaiiglhc caqsssvpak dicqvpslpq tssdsysasl
     2041 asrrrysltl skikvprrtp vmptaniklp pgmfkctesq deafakeerq rvqrreqpar
     2101 rtdsihsvyi aqgsalahaq elgdeyepta klkrrfsdpy shipcvek
//
LOCUS       XP_041337080            2073 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041337080
VERSION     XP_041337080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2073
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2073
                     /product="unconventional myosin-IXb isoform X8"
                     /calculated_mol_wt=237045
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..965
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            901..910
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(913..940,944..965)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <995..>1241
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1074..1495
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1678..1735
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1747..1932
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1784,1821,1825,1894,1897..1898,1923)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1784
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2073
                     /gene="MYO9B"
                     /coded_by="XM_041481146.1:224..6445"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrlsvld fsfdcsedfd inafqdiisf cenkkdmheq iiasikglpw
      781 qgddpcellr slsqlqhrsh llksrgvkqk qiipknllds kslklimsmt lhdrttksll
      841 hlhkkkkpps isaqfqtsln klletlgrae pffircirsn aekkemlfde slvlqqlryt
      901 gmletvrirr sgysakytfq efidqfqvll pknakasked icaylnklkl nenyyqigkt
      961 kvfmkeaerq ilqdtlhkev irkiillqsw lrmvlerrrf lrmrqaavvl qacwrsrcvr
     1021 malqrnnaai eiqaawrrhr qrkrflqlrr rlcllqalvr ghlqrkryqk mvlerqkaee
     1081 eqrevqeded keqdtskthn idedtskdeq sepatdelpv khesepdqav ededqaqneq
     1141 aenlssseka tlpqkqpves servtnsrek resrrqrgle hndlqnkhvl lsfegpsalc
     1201 heeqtvseea letapepeks taqednvlqg ssegekspse ekplsdtpps seikesgsvp
     1261 eqppgsdaed maadrmktqq nqnnqikgsq sftcperptd lalnvhntls atgsfqgpad
     1321 cwadrnrrqr atkdldspta aiqryvddpe klkykrekwk gkrqsdagqn dvlsqsldgr
     1381 irvdkspqdh lekkgssasl sdlstlvqtv amnqqspdpi eeekgnkkfp vqkkpsdhfp
     1441 aldtavpvqp asqqgdaksa fksplrrllg kkpdkkiake ssdvieegdg lslvscvlft
     1501 dtggtqkvse gssgqpgrpq agkesskakk nrtikiskis svsqnwrasm vreiananel
     1561 khldefllnk indlrsqksg veclffeate kfrgniktmy sapngqihvg ykdlvenyql
     1621 lvtnlakkre ekevklvlnl flslldefir gytkkeepeq pkqtkaqkkk rkqdraieeh
     1681 nghvftnyqv sirqscehcs syiwpmekac lcsvckltch kkcmskiqss ctscgkkgeq
     1741 daeprhfgvc vsaltserns vpmvmeklle yvemhglyte giyrksgsan rmkelkqllq
     1801 edpnsvklen ypihtitgil kqwlrelpdp lmtsaqyndf lravelpekq eqlcaiysvl
     1861 eqlpqanhnt lerlifhlvk valiedvnrm spnalaivfa pcllrcpdts dpltsmkdvs
     1921 kttmcvemli keqirkykik meeinqleaa esfafrrlsl lrqntlwpik lgfsspyegk
     1981 lskssqvkgn dsgtseldsv heeedvsean nrekeilidr iqsikeeked ityrlpeldq
     2041 rgsdeenvds etsastesll edkpgrvdte gqy
//
LOCUS       XP_041337089            2043 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXb isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041337089
VERSION     XP_041337089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2043
                     /product="unconventional myosin-IXb isoform X9"
                     /calculated_mol_wt=233572
     Region          16..111
                     /region_name="RA_Myosin-IXb"
                     /note="Ras-associating (RA) domain found in Myosin-IXb;
                     cd17217"
                     /db_xref="CDD:340737"
     Region          159..935
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(186..194,238..245,284..294,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            186..194
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            238..245
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            284..294
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            871..880
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(883..910,914..935)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          <965..>1211
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          <1044..1465
                     /region_name="MDN1"
                     /note="Midasin, AAA ATPase with vWA domain, involved in
                     ribosome maturation [Translation, ribosomal structure and
                     biogenesis]; COG5271"
                     /db_xref="CDD:444083"
     Region          1648..1705
                     /region_name="C1_Myosin-IXb"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXb and similar proteins;
                     cd20884"
                     /db_xref="CDD:410434"
     Region          1717..1902
                     /region_name="RhoGAP_myosin_IXB"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXB. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04407"
                     /db_xref="CDD:239872"
     Site            order(1754,1791,1795,1864,1867..1868,1893)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239872"
     Site            1754
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239872"
     CDS             1..2043
                     /gene="MYO9B"
                     /coded_by="XM_041481155.1:224..6355"
                     /db_xref="GeneID:121360912"
ORIGIN      
        1 mslkdadsav cqakaaynlh iypqlstesa pcckvtatkd stssdvikdv inilnldvsk
       61 hyvlvevkes ggeewvldin dspvhrvllw prraqdehpq kdgyyfllqe rntdgtikyv
      121 qmqllsketd arrlvergfl pwhqedfddl cnlpnltett llenlkcrfl khriytyags
      181 iliainpfkf lpiynpkyvk myenhqlgkl ephifaiadv ayhtmlkkhv nqcivisges
      241 gsgktqstnf lihcltalsq kgyasgvert ilgagpvlea fgnaktahnn nssrfgkfiq
      301 vnylengivr gavvekylle ksrlvsqekd ernyhvfyyl llgvneeerk efhlkqpedy
      361 fylnqhnlki edgedlrhef erlkqamemv gflsatkkqi fsilsailyl gnvtykkkat
      421 grdegldvgp pevldilsql lkvkreilve vltkrktvta ndklilpysl neaitardsm
      481 akslysalfd wivlrinhal lnkkdmeesv tclsigvldi fgfedfetns feqfcinyan
      541 eqlqyyfnqh ifkleqeeyk segitwhnid ytdnvacihl iskkptglfy lldeesnfph
      601 atnqtllakf kqqheenkff vgtpvmepaf iirhfagkvk yqikdfrekn mdymrpdiva
      661 llrssdsafv religmdpva vfrwavlraa iramavfaqa grdraqktag vvrqgprvpl
      721 gelqrsntpv ekvyrdmheq iiasikglpw qgddpcellr slsqlqhrsh llksrgvkqk
      781 qiipknllds kslklimsmt lhdrttksll hlhkkkkpps isaqfqtsln klletlgrae
      841 pffircirsn aekkemlfde slvlqqlryt gmletvrirr sgysakytfq efidqfqvll
      901 pknakasked icaylnklkl nenyyqigkt kvfmkeaerq ilqdtlhkev irkiillqsw
      961 lrmvlerrrf lrmrqaavvl qacwrsrcvr malqrnnaai eiqaawrrhr qrkrflqlrr
     1021 rlcllqalvr ghlqrkryqk mvlerqkaee eqrevqeded keqdtskthn idedtskdeq
     1081 sepatdelpv khesepdqav ededqaqneq aenlssseka tlpqkqpves servtnsrek
     1141 resrrqrgle hndlqnkhvl lsfegpsalc heeqtvseea letapepeks taqednvlqg
     1201 ssegekspse ekplsdtpps seikesgsvp eqppgsdaed maadrmktqq nqnnqikgsq
     1261 sftcperptd lalnvhntls atgsfqgpad cwadrnrrqr atkdldspta aiqryvddpe
     1321 klkykrekwk gkrqsdagqn dvlsqsldgr irvdkspqdh lekkgssasl sdlstlvqtv
     1381 amnqqspdpi eeekgnkkfp vqkkpsdhfp aldtavpvqp asqqgdaksa fksplrrllg
     1441 kkpdkkiake ssdvieegdg lslvscvlft dtggtqkvse gssgqpgrpq agkesskakk
     1501 nrtikiskis svsqnwrasm vreiananel khldefllnk indlrsqksg veclffeate
     1561 kfrgniktmy sapngqihvg ykdlvenyql lvtnlakkre ekevklvlnl flslldefir
     1621 gytkkeepeq pkqtkaqkkk rkqdraieeh nghvftnyqv sirqscehcs syiwpmekac
     1681 lcsvckltch kkcmskiqss ctscgkkgeq daeprhfgvc vsaltserns vpmvmeklle
     1741 yvemhglyte giyrksgsan rmkelkqllq edpnsvklen ypihtitgil kqwlrelpdp
     1801 lmtsaqyndf lravelpekq eqlcaiysvl eqlpqanhnt lerlifhlvk valiedvnrm
     1861 spnalaivfa pcllrcpdts dpltsmkdvs kttmcvemli keqirkykik meeinqleaa
     1921 esfafrrlsl lrqntlwpik lgfsspyegk lskssqvkgn dsgtseldsv heeedvsean
     1981 nrekeilidr iqsikeeked ityrlpeldq rgsdeenvds etsastesll edkpgrvdte
     2041 gqy
//
LOCUS       XP_041337103            1475 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated serine/threonine-protein kinase 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337103
VERSION     XP_041337103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1475
                     /product="microtubule-associated serine/threonine-protein
                     kinase 3 isoform X1"
                     /calculated_mol_wt=162082
     Region          63..343
                     /region_name="DUF1908"
                     /note="Domain of unknown function (DUF1908); pfam08926"
                     /db_xref="CDD:462637"
     Region          381..660
                     /region_name="STKc_MAST"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Microtubule-associated serine/threonine kinase;
                     cd05609"
                     /db_xref="CDD:270760"
     Site            order(388..392,396,409,411,443,459..460,462,466,468,505,
                     507,509..510,512,522..523,526,555..560,587,593,596)
                     /site_type="active"
                     /db_xref="CDD:270760"
     Site            order(388..392,396,409,411,443,460..462,466,505,507,
                     509..510,512,522..523)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270760"
     Site            order(392,466,468,505,507,509,526,555..560,587,593,596)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270760"
     Site            order(522..532,552..560)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270760"
     Region          952..1045
                     /region_name="PDZ_MAST3"
                     /note="PDZ domain of microtubule-associated
                     serine-threonine (MAST) protein kinase 3 (MAST3); cd23075"
                     /db_xref="CDD:467288"
     Site            order(964..970,989,992,1021,1025,1028..1029)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467288"
     CDS             1..1475
                     /gene="MAST3"
                     /coded_by="XM_041481169.1:152..4579"
                     /db_xref="GeneID:121360952"
ORIGIN      
        1 msdpscwgaa ppgyrgqraa gallqrsksc rssnrkslvv gtpsptlsrp lsplsvptag
       61 sspldsprnf sastsinfpf arshaprtdr adgrrwslas lpssgygtnt psstvsssss
      121 sqerlhqlpy qptpdelhfl skhfrstesv tdeegrhspc lrprsrslsp grtsgtfdne
      181 vvmmnhvyke rfpkataqme erlqdtitnf spsstlplad gvlgfihhqi ielardclak
      241 sqgalitsry fmelqeklek mlrdaqerse seevkfidql vrklliiisr parlleclef
      301 dpeefyhlle aaeghakvgq giktdipryi isqlglvkdp leemgqldhf dsgntitpen
      361 ddtcesqpsv pvprrkpceg dfetiklisn gaygavylvr hretrqrfal kkinkqnlil
      421 rnqiqqvfve rdiltfaenp fvvsmfcsfe tkrhlcmvme yveggdcatl lknmgplpvd
      481 makmyfaetv laleylhnyg ivhrdlkpdn llitsmghik ltdfglskig lmnmttnlye
      541 ghmekdtref mdkqvcgtpe yiapeviliq gygkpvdwwa mgiilyeflv gcvpffgdtp
      601 eelfgqvisd eimwpegdea lpadaqdlit rllrqcpler lgtggahevk hhsfflhldw
      661 ngllrqkaef ipqleseddt syfdtrsery rhldsedeet ndeessveig qfsscshrfs
      721 kvysssefla vnstlslsss ershcddkee rwdrhsgded rsrpagtepr lrswtsgsst
      781 pytsrhersr sptalpstls ldtmpkfafs sedespcvas kpekpkfvvg dsdagtggav
      841 kqsalsadlv slnrirlrsn stgtknstpr slepsggrrl stqkdmperq raslgsrvpk
      901 sasvsalsli itsddfggsa lmspisphsl ssnpssrdss psrdsslaia slrppiiihs
      961 sgkkygftlr airvymgdsd vytvhhmvws veegspaqea glragdlith vngesvlglv
     1021 hrdvvelllk sgnkvalrtt alentsikig parknssktr marrskksrk rdgqdsrrks
     1081 lfkkiskqss vlhtsrsfss glhhslssse slpespthsl spgptppcrs papdlpsdav
     1141 spqstspsss tptspaghvr psslhglapk lggprykvgr rkstssipps plactpssaq
     1201 rppspqrsps plpgypktph sfqgktlspp tivrqssrpr sadcprspll krvqsaekiv
     1261 tilaekktsg grklglemst ldgeaiaegd alpypaehgy hpassrlaer hdrdqemvvm
     1321 rrlnlserrd sfkkqeavqe vsfdeqetaa gsedggkgee gqgtaaqgga epppkpkpgt
     1381 vpqiavqgse sdeqepavae wecqgsypis steqpnssis lpwwdgcehr drgsqqqrnc
     1441 gqgspghwqv paqgqqptga hlpaprgvws gakha
//
LOCUS       XP_041337113            1474 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated serine/threonine-protein kinase 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337113
VERSION     XP_041337113.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481179.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1474
                     /product="microtubule-associated serine/threonine-protein
                     kinase 3 isoform X2"
                     /calculated_mol_wt=161995
     Region          63..343
                     /region_name="DUF1908"
                     /note="Domain of unknown function (DUF1908); pfam08926"
                     /db_xref="CDD:462637"
     Region          381..660
                     /region_name="STKc_MAST"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Microtubule-associated serine/threonine kinase;
                     cd05609"
                     /db_xref="CDD:270760"
     Site            order(388..392,396,409,411,443,459..460,462,466,468,505,
                     507,509..510,512,522..523,526,555..560,587,593,596)
                     /site_type="active"
                     /db_xref="CDD:270760"
     Site            order(388..392,396,409,411,443,460..462,466,505,507,
                     509..510,512,522..523)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270760"
     Site            order(392,466,468,505,507,509,526,555..560,587,593,596)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270760"
     Site            order(522..532,552..560)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270760"
     Region          952..1045
                     /region_name="PDZ_MAST3"
                     /note="PDZ domain of microtubule-associated
                     serine-threonine (MAST) protein kinase 3 (MAST3); cd23075"
                     /db_xref="CDD:467288"
     Site            order(964..970,989,992,1021,1025,1028..1029)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467288"
     CDS             1..1474
                     /gene="MAST3"
                     /coded_by="XM_041481179.1:152..4576"
                     /db_xref="GeneID:121360952"
ORIGIN      
        1 msdpscwgaa ppgyrgqraa gallqrsksc rssnrkslvv gtpsptlsrp lsplsvptag
       61 sspldsprnf sastsinfpf arshaprtdr adgrrwslas lpssgygtnt psstvsssss
      121 sqerlhqlpy qptpdelhfl skhfrstesv tdeegrhspc lrprsrslsp grtsgtfdne
      181 vvmmnhvyke rfpkataqme erlqdtitnf spsstlplad gvlgfihhqi ielardclak
      241 sqgalitsry fmelqeklek mlrdaqerse seevkfidql vrklliiisr parlleclef
      301 dpeefyhlle aaeghakvgq giktdipryi isqlglvkdp leemgqldhf dsgntitpen
      361 ddtcesqpsv pvprrkpceg dfetiklisn gaygavylvr hretrqrfal kkinkqnlil
      421 rnqiqqvfve rdiltfaenp fvvsmfcsfe tkrhlcmvme yveggdcatl lknmgplpvd
      481 makmyfaetv laleylhnyg ivhrdlkpdn llitsmghik ltdfglskig lmnmttnlye
      541 ghmekdtref mdkqvcgtpe yiapeviliq gygkpvdwwa mgiilyeflv gcvpffgdtp
      601 eelfgqvisd eimwpegdea lpadaqdlit rllrqcpler lgtggahevk hhsfflhldw
      661 ngllrqkaef ipqleseddt syfdtrsery rhldsedeet ndeessveig qfsscshrfs
      721 kvysssefla vnstlslsss ershcddkee rwdrhsgded rsrpagtepr lrswtsgsst
      781 pytsrhersr sptalpstls ldtmpkfafs sedespcvas kpekpkfvvg dsdagtggav
      841 kqsalsadlv slnrirlrsn stgtknstpr slepsggrrl stqkdmperq raslgsrvpk
      901 sasvsalsli itsddfggsa lmspisphsl ssnpssrdss psrdsslaia slrppiiihs
      961 sgkkygftlr airvymgdsd vytvhhmvws veegspaqea glragdlith vngesvlglv
     1021 hrdvvelllk sgnkvalrtt alentsikig parknssktr marrskksrk rdgqdrrksl
     1081 fkkiskqssv lhtsrsfssg lhhslssses lpespthsls pgptppcrsp apdlpsdavs
     1141 pqstspssst ptspaghvrp sslhglapkl ggprykvgrr kstssippsp lactpssaqr
     1201 ppspqrspsp lpgypktphs fqgktlsppt ivrqssrprs adcprspllk rvqsaekivt
     1261 ilaekktsgg rklglemstl dgeaiaegda lpypaehgyh passrlaerh drdqemvvmr
     1321 rlnlserrds fkkqeavqev sfdeqetaag sedggkgeeg qgtaaqggae pppkpkpgtv
     1381 pqiavqgses deqepavaew ecqgsypiss teqpnssisl pwwdgcehrd rgsqqqrncg
     1441 qgspghwqvp aqgqqptgah lpaprgvwsg akha
//
LOCUS       XP_041337123            1464 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated serine/threonine-protein kinase 3 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337123
VERSION     XP_041337123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481189.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1464
                     /product="microtubule-associated serine/threonine-protein
                     kinase 3 isoform X3"
                     /calculated_mol_wt=160907
     Region          52..332
                     /region_name="DUF1908"
                     /note="Domain of unknown function (DUF1908); pfam08926"
                     /db_xref="CDD:462637"
     Region          370..649
                     /region_name="STKc_MAST"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Microtubule-associated serine/threonine kinase;
                     cd05609"
                     /db_xref="CDD:270760"
     Site            order(377..381,385,398,400,432,448..449,451,455,457,494,
                     496,498..499,501,511..512,515,544..549,576,582,585)
                     /site_type="active"
                     /db_xref="CDD:270760"
     Site            order(377..381,385,398,400,432,449..451,455,494,496,
                     498..499,501,511..512)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270760"
     Site            order(381,455,457,494,496,498,515,544..549,576,582,585)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270760"
     Site            order(511..521,541..549)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270760"
     Region          941..1034
                     /region_name="PDZ_MAST3"
                     /note="PDZ domain of microtubule-associated
                     serine-threonine (MAST) protein kinase 3 (MAST3); cd23075"
                     /db_xref="CDD:467288"
     Site            order(953..959,978,981,1010,1014,1017..1018)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467288"
     CDS             1..1464
                     /gene="MAST3"
                     /coded_by="XM_041481189.1:737..5131"
                     /db_xref="GeneID:121360952"
ORIGIN      
        1 mavhtsnstg tqpskpnscr ssnrkslvvg tpsptlsrpl splsvptags spldsprnfs
       61 astsinfpfa rshaprtdra dgrrwslasl pssgygtntp sstvssssss qerlhqlpyq
      121 ptpdelhfls khfrstesvt deegrhspcl rprsrslspg rtsgtfdnev vmmnhvyker
      181 fpkataqmee rlqdtitnfs psstlpladg vlgfihhqii elardclaks qgalitsryf
      241 melqeklekm lrdaqerses eevkfidqlv rklliiisrp arlleclefd peefyhllea
      301 aeghakvgqg iktdipryii sqlglvkdpl eemgqldhfd sgntitpend dtcesqpsvp
      361 vprrkpcegd fetiklisng aygavylvrh retrqrfalk kinkqnlilr nqiqqvfver
      421 diltfaenpf vvsmfcsfet krhlcmvmey veggdcatll knmgplpvdm akmyfaetvl
      481 aleylhnygi vhrdlkpdnl litsmghikl tdfglskigl mnmttnlyeg hmekdtrefm
      541 dkqvcgtpey iapeviliqg ygkpvdwwam giilyeflvg cvpffgdtpe elfgqvisde
      601 imwpegdeal padaqdlitr llrqcplerl gtggahevkh hsfflhldwn gllrqkaefi
      661 pqleseddts yfdtrseryr hldsedeetn deessveigq fsscshrfsk vyssseflav
      721 nstlslssse rshcddkeer wdrhsgdedr srpagteprl rswtsgsstp ytsrhersrs
      781 ptalpstlsl dtmpkfafss edespcvask pekpkfvvgd sdagtggavk qsalsadlvs
      841 lnrirlrsns tgtknstprs lepsggrrls tqkdmperqr aslgsrvpks asvsalslii
      901 tsddfggsal mspisphsls snpssrdssp srdsslaias lrppiiihss gkkygftlra
      961 irvymgdsdv ytvhhmvwsv eegspaqeag lragdlithv ngesvlglvh rdvvelllks
     1021 gnkvalrtta lentsikigp arknssktrm arrskksrkr dgqdsrrksl fkkiskqssv
     1081 lhtsrsfssg lhhslssses lpespthsls pgptppcrsp apdlpsdavs pqstspssst
     1141 ptspaghvrp sslhglapkl ggprykvgrr kstssippsp lactpssaqr ppspqrspsp
     1201 lpgypktphs fqgktlsppt ivrqssrprs adcprspllk rvqsaekivt ilaekktsgg
     1261 rklglemstl dgeaiaegda lpypaehgyh passrlaerh drdqemvvmr rlnlserrds
     1321 fkkqeavqev sfdeqetaag sedggkgeeg qgtaaqggae pppkpkpgtv pqiavqgses
     1381 deqepavaew ecqgsypiss teqpnssisl pwwdgcehrd rgsqqqrncg qgspghwqvp
     1441 aqgqqptgah lpaprgvwsg akha
//
LOCUS       XP_041337131            1462 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated serine/threonine-protein kinase 3 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337131
VERSION     XP_041337131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481197.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1462
                     /product="microtubule-associated serine/threonine-protein
                     kinase 3 isoform X4"
                     /calculated_mol_wt=160934
     Region          50..330
                     /region_name="DUF1908"
                     /note="Domain of unknown function (DUF1908); pfam08926"
                     /db_xref="CDD:462637"
     Region          368..647
                     /region_name="STKc_MAST"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Microtubule-associated serine/threonine kinase;
                     cd05609"
                     /db_xref="CDD:270760"
     Site            order(375..379,383,396,398,430,446..447,449,453,455,492,
                     494,496..497,499,509..510,513,542..547,574,580,583)
                     /site_type="active"
                     /db_xref="CDD:270760"
     Site            order(375..379,383,396,398,430,447..449,453,492,494,
                     496..497,499,509..510)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270760"
     Site            order(379,453,455,492,494,496,513,542..547,574,580,583)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270760"
     Site            order(509..519,539..547)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270760"
     Region          939..1032
                     /region_name="PDZ_MAST3"
                     /note="PDZ domain of microtubule-associated
                     serine-threonine (MAST) protein kinase 3 (MAST3); cd23075"
                     /db_xref="CDD:467288"
     Site            order(951..957,976,979,1008,1012,1015..1016)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467288"
     CDS             1..1462
                     /gene="MAST3"
                     /coded_by="XM_041481197.1:6..4394"
                     /db_xref="GeneID:121360952"
ORIGIN      
        1 mksrrgrlki psltldcrss nrkslvvgtp sptlsrplsp lsvptagssp ldsprnfsas
       61 tsinfpfars haprtdradg rrwslaslps sgygtntpss tvssssssqe rlhqlpyqpt
      121 pdelhflskh frstesvtde egrhspclrp rsrslspgrt sgtfdnevvm mnhvykerfp
      181 kataqmeerl qdtitnfsps stlpladgvl gfihhqiiel ardclaksqg alitsryfme
      241 lqeklekmlr daqersesee vkfidqlvrk lliiisrpar lleclefdpe efyhlleaae
      301 ghakvgqgik tdipryiisq lglvkdplee mgqldhfdsg ntitpenddt cesqpsvpvp
      361 rrkpcegdfe tiklisngay gavylvrhre trqrfalkki nkqnlilrnq iqqvfverdi
      421 ltfaenpfvv smfcsfetkr hlcmvmeyve ggdcatllkn mgplpvdmak myfaetvlal
      481 eylhnygivh rdlkpdnlli tsmghikltd fglskiglmn mttnlyeghm ekdtrefmdk
      541 qvcgtpeyia peviliqgyg kpvdwwamgi ilyeflvgcv pffgdtpeel fgqvisdeim
      601 wpegdealpa daqdlitrll rqcplerlgt ggahevkhhs fflhldwngl lrqkaefipq
      661 leseddtsyf dtrseryrhl dsedeetnde essveigqfs scshrfskvy ssseflavns
      721 tlslsssers hcddkeerwd rhsgdedrsr pagteprlrs wtsgsstpyt srhersrspt
      781 alpstlsldt mpkfafssed espcvaskpe kpkfvvgdsd agtggavkqs alsadlvsln
      841 rirlrsnstg tknstprsle psggrrlstq kdmperqras lgsrvpksas vsalsliits
      901 ddfggsalms pisphslssn pssrdsspsr dsslaiaslr ppiiihssgk kygftlrair
      961 vymgdsdvyt vhhmvwsvee gspaqeaglr agdlithvng esvlglvhrd vvelllksgn
     1021 kvalrttale ntsikigpar knssktrmar rskksrkrdg qdsrrkslfk kiskqssvlh
     1081 tsrsfssglh hslssseslp espthslspg ptppcrspap dlpsdavspq stspssstpt
     1141 spaghvrpss lhglapklgg prykvgrrks tssippspla ctpssaqrpp spqrspsplp
     1201 gypktphsfq gktlspptiv rqssrprsad cprspllkrv qsaekivtil aekktsggrk
     1261 lglemstldg eaiaegdalp ypaehgyhpa ssrlaerhdr dqemvvmrrl nlserrdsfk
     1321 kqeavqevsf deqetaagse dggkgeegqg taaqggaepp pkpkpgtvpq iavqgsesde
     1381 qepavaewec qgsypisste qpnssislpw wdgcehrdrg sqqqrncgqg spghwqvpaq
     1441 gqqptgahlp aprgvwsgak ha
//
LOCUS       XP_041337137            1257 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated serine/threonine-protein kinase 3 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337137
VERSION     XP_041337137.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481203.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1257
                     /product="microtubule-associated serine/threonine-protein
                     kinase 3 isoform X5"
                     /calculated_mol_wt=138720
     Region          63..343
                     /region_name="DUF1908"
                     /note="Domain of unknown function (DUF1908); pfam08926"
                     /db_xref="CDD:462637"
     Region          381..660
                     /region_name="STKc_MAST"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Microtubule-associated serine/threonine kinase;
                     cd05609"
                     /db_xref="CDD:270760"
     Site            order(388..392,396,409,411,443,459..460,462,466,468,505,
                     507,509..510,512,522..523,526,555..560,587,593,596)
                     /site_type="active"
                     /db_xref="CDD:270760"
     Site            order(388..392,396,409,411,443,460..462,466,505,507,
                     509..510,512,522..523)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270760"
     Site            order(392,466,468,505,507,509,526,555..560,587,593,596)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270760"
     Site            order(522..532,552..560)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270760"
     Region          952..1045
                     /region_name="PDZ_MAST3"
                     /note="PDZ domain of microtubule-associated
                     serine-threonine (MAST) protein kinase 3 (MAST3); cd23075"
                     /db_xref="CDD:467288"
     Site            order(964..970,989,992,1021,1025,1028..1029)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467288"
     CDS             1..1257
                     /gene="MAST3"
                     /coded_by="XM_041481203.1:152..3925"
                     /db_xref="GeneID:121360952"
ORIGIN      
        1 msdpscwgaa ppgyrgqraa gallqrsksc rssnrkslvv gtpsptlsrp lsplsvptag
       61 sspldsprnf sastsinfpf arshaprtdr adgrrwslas lpssgygtnt psstvsssss
      121 sqerlhqlpy qptpdelhfl skhfrstesv tdeegrhspc lrprsrslsp grtsgtfdne
      181 vvmmnhvyke rfpkataqme erlqdtitnf spsstlplad gvlgfihhqi ielardclak
      241 sqgalitsry fmelqeklek mlrdaqerse seevkfidql vrklliiisr parlleclef
      301 dpeefyhlle aaeghakvgq giktdipryi isqlglvkdp leemgqldhf dsgntitpen
      361 ddtcesqpsv pvprrkpceg dfetiklisn gaygavylvr hretrqrfal kkinkqnlil
      421 rnqiqqvfve rdiltfaenp fvvsmfcsfe tkrhlcmvme yveggdcatl lknmgplpvd
      481 makmyfaetv laleylhnyg ivhrdlkpdn llitsmghik ltdfglskig lmnmttnlye
      541 ghmekdtref mdkqvcgtpe yiapeviliq gygkpvdwwa mgiilyeflv gcvpffgdtp
      601 eelfgqvisd eimwpegdea lpadaqdlit rllrqcpler lgtggahevk hhsfflhldw
      661 ngllrqkaef ipqleseddt syfdtrsery rhldsedeet ndeessveig qfsscshrfs
      721 kvysssefla vnstlslsss ershcddkee rwdrhsgded rsrpagtepr lrswtsgsst
      781 pytsrhersr sptalpstls ldtmpkfafs sedespcvas kpekpkfvvg dsdagtggav
      841 kqsalsadlv slnrirlrsn stgtknstpr slepsggrrl stqkdmperq raslgsrvpk
      901 sasvsalsli itsddfggsa lmspisphsl ssnpssrdss psrdsslaia slrppiiihs
      961 sgkkygftlr airvymgdsd vytvhhmvws veegspaqea glragdlith vngesvlglv
     1021 hrdvvelllk sgnkvalrtt alentsikig parknssktr marrskksrk rdgqdsrrks
     1081 lfkkiskqss vlhtsrsfss glhhslssse slpespthsl spgptppcrs papdlpsgqd
     1141 pvpphhrpae laapqrrlpp lpppqarpvg redrhhpgre enqrrpqaga gdvhagwggh
     1201 rggrraavpr garvpprqlp agraprpgpg dggdaapepv gaqgllqear ggsrsef
//
LOCUS       XP_041337146            1461 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated serine/threonine-protein kinase 3 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337146
VERSION     XP_041337146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481212.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1461
                     /product="microtubule-associated serine/threonine-protein
                     kinase 3 isoform X6"
                     /calculated_mol_wt=160847
     Region          50..330
                     /region_name="DUF1908"
                     /note="Domain of unknown function (DUF1908); pfam08926"
                     /db_xref="CDD:462637"
     Region          368..647
                     /region_name="STKc_MAST"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Microtubule-associated serine/threonine kinase;
                     cd05609"
                     /db_xref="CDD:270760"
     Site            order(375..379,383,396,398,430,446..447,449,453,455,492,
                     494,496..497,499,509..510,513,542..547,574,580,583)
                     /site_type="active"
                     /db_xref="CDD:270760"
     Site            order(375..379,383,396,398,430,447..449,453,492,494,
                     496..497,499,509..510)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270760"
     Site            order(379,453,455,492,494,496,513,542..547,574,580,583)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270760"
     Site            order(509..519,539..547)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270760"
     Region          939..1032
                     /region_name="PDZ_MAST3"
                     /note="PDZ domain of microtubule-associated
                     serine-threonine (MAST) protein kinase 3 (MAST3); cd23075"
                     /db_xref="CDD:467288"
     Site            order(951..957,976,979,1008,1012,1015..1016)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467288"
     CDS             1..1461
                     /gene="MAST3"
                     /coded_by="XM_041481212.1:6..4391"
                     /db_xref="GeneID:121360952"
ORIGIN      
        1 mksrrgrlki psltldcrss nrkslvvgtp sptlsrplsp lsvptagssp ldsprnfsas
       61 tsinfpfars haprtdradg rrwslaslps sgygtntpss tvssssssqe rlhqlpyqpt
      121 pdelhflskh frstesvtde egrhspclrp rsrslspgrt sgtfdnevvm mnhvykerfp
      181 kataqmeerl qdtitnfsps stlpladgvl gfihhqiiel ardclaksqg alitsryfme
      241 lqeklekmlr daqersesee vkfidqlvrk lliiisrpar lleclefdpe efyhlleaae
      301 ghakvgqgik tdipryiisq lglvkdplee mgqldhfdsg ntitpenddt cesqpsvpvp
      361 rrkpcegdfe tiklisngay gavylvrhre trqrfalkki nkqnlilrnq iqqvfverdi
      421 ltfaenpfvv smfcsfetkr hlcmvmeyve ggdcatllkn mgplpvdmak myfaetvlal
      481 eylhnygivh rdlkpdnlli tsmghikltd fglskiglmn mttnlyeghm ekdtrefmdk
      541 qvcgtpeyia peviliqgyg kpvdwwamgi ilyeflvgcv pffgdtpeel fgqvisdeim
      601 wpegdealpa daqdlitrll rqcplerlgt ggahevkhhs fflhldwngl lrqkaefipq
      661 leseddtsyf dtrseryrhl dsedeetnde essveigqfs scshrfskvy ssseflavns
      721 tlslsssers hcddkeerwd rhsgdedrsr pagteprlrs wtsgsstpyt srhersrspt
      781 alpstlsldt mpkfafssed espcvaskpe kpkfvvgdsd agtggavkqs alsadlvsln
      841 rirlrsnstg tknstprsle psggrrlstq kdmperqras lgsrvpksas vsalsliits
      901 ddfggsalms pisphslssn pssrdsspsr dsslaiaslr ppiiihssgk kygftlrair
      961 vymgdsdvyt vhhmvwsvee gspaqeaglr agdlithvng esvlglvhrd vvelllksgn
     1021 kvalrttale ntsikigpar knssktrmar rskksrkrdg qdrrkslfkk iskqssvlht
     1081 srsfssglhh slssseslpe spthslspgp tppcrspapd lpsdavspqs tspssstpts
     1141 paghvrpssl hglapklggp rykvgrrkst ssippsplac tpssaqrpps pqrspsplpg
     1201 ypktphsfqg ktlspptivr qssrprsadc prspllkrvq saekivtila ekktsggrkl
     1261 glemstldge aiaegdalpy paehgyhpas srlaerhdrd qemvvmrrln lserrdsfkk
     1321 qeavqevsfd eqetaagsed ggkgeegqgt aaqggaeppp kpkpgtvpqi avqgsesdeq
     1381 epavaewecq gsypissteq pnssislpww dgcehrdrgs qqqrncgqgs pghwqvpaqg
     1441 qqptgahlpa prgvwsgakh a
//
LOCUS       XP_041337160             436 aa            linear   VRT 06-MAY-2021
DEFINITION  mucosal addressin cell adhesion molecule 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337160
VERSION     XP_041337160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481226.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="mucosal addressin cell adhesion molecule 1"
                     /calculated_mol_wt=45543
     Region          24..106
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          39..43
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          51..55
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          71..75
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          85..90
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          98..101
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          105..198
                     /region_name="C1-set"
                     /note="Immunoglobulin C1-set domain; pfam07654"
                     /db_xref="CDD:462221"
     Region          <211..324
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          322..395
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     CDS             1..436
                     /gene="MADCAM1"
                     /coded_by="XM_041481226.1:725..2035"
                     /db_xref="GeneID:121360977"
ORIGIN      
        1 mepapvllll gslwgcsgrp adrlvvtpre plvpfggste lncslacagg kvewrgldta
       61 lgtissfsth silhirhatv ategmkicqg kchgqhyqkt vtlkvyalpd tlrleaaphi
      121 lrpghpaslt csathvyppt glaltwyrgh qvlenladvd ckdadeeelc nvvstlsvsg
      181 tevaegaefr cevtlhvgqe tftrvaslva saeavmtaam atstaspsta rpvattalpp
      241 gpgvpasdpt tarepstatt ldvavvtnpp stepsvpqdl magshtagva tstlpgcgta
      301 atgppvgtmp acslqirslp ptgtrgralr iecharctgn atvgwlrtpa alsqyreeaa
      361 gsssalrldr aepwhqghyq cvllghraqt vslevmvvdd sfssspaiam gtagsllgll
      421 ltaavsrrlw krfrsr
//
LOCUS       XP_041337174             274 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin polyglutamylase complex subunit 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337174
VERSION     XP_041337174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="tubulin polyglutamylase complex subunit 1
                     isoform X1"
                     /calculated_mol_wt=28852
     Region          41..79
                     /region_name="DD_TPGS1"
                     /note="dimerization/docking (D/D) domain found in tubulin
                     polyglutamylase complex subunit 1 (TPGS1) and similar
                     proteins; cd22960"
                     /db_xref="CDD:438529"
     CDS             1..274
                     /gene="TPGS1"
                     /coded_by="XM_041481240.1:32..856"
                     /db_xref="GeneID:121360983"
ORIGIN      
        1 maayekrraa aapvpaggse lpepgraapg gggpaegsaa efllragvta mvreallkvl
       61 earpaepvsf laeyferlvl aeaaaeppgp pqrlaralwt afdsnagaay evlgcggrrr
      121 aagvdgrlys ellrricqrg aapaeaaael lrrvrcrdhe avpfdvfryg vltccvllef
      181 aakadalfav lgagdsadsr lcqavlrale dalgaghgsr paryleagsr lgpdrlalam
      241 dqalqerklg ssmsreeflr katalfiakv kpve
//
LOCUS       XP_041337182             284 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin polyglutamylase complex subunit 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337182
VERSION     XP_041337182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="tubulin polyglutamylase complex subunit 1
                     isoform X2"
                     /calculated_mol_wt=30054
     Region          41..79
                     /region_name="DD_TPGS1"
                     /note="dimerization/docking (D/D) domain found in tubulin
                     polyglutamylase complex subunit 1 (TPGS1) and similar
                     proteins; cd22960"
                     /db_xref="CDD:438529"
     CDS             1..284
                     /gene="TPGS1"
                     /coded_by="XM_041481248.1:32..886"
                     /db_xref="GeneID:121360983"
ORIGIN      
        1 maayekrraa aapvpaggse lpepgraapg gggpaegsaa efllragvta mvreallkvl
       61 earpaepvsf laeyferlvl aeaaaeppgp pqrlaralwy vclvrsshrt afdsnagaay
      121 evlgcggrrr aagvdgrlys ellrricqrg aapaeaaael lrrvrcrdhe avpfdvfryg
      181 vltccvllef aakadalfav lgagdsadsr lcqavlrale dalgaghgsr paryleagsr
      241 lgpdrlalam dqalqerklg ssmsreeflr katalfiakv kpve
//
LOCUS       XP_041337194             235 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 R1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337194
VERSION     XP_041337194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..235
                     /product="ubiquitin-conjugating enzyme E2 R1"
                     /calculated_mol_wt=26669
     Region          11..180
                     /region_name="UBCc_UBE2R"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 R1-R2 and
                     related proteins; cd23803"
                     /db_xref="CDD:467423"
     CDS             1..235
                     /gene="CDC34"
                     /coded_by="XM_041481260.1:98..805"
                     /db_xref="GeneID:121360992"
ORIGIN      
        1 marppvpssq kalllelkgl qeepvegfrv rlvdegdlyt wdvaifgppd thyeggyfka
       61 rlrfpidypy sppafrfltk mwhpniyetg dvcisilhpp vddpqsgelp serwnptqnv
      121 rtillsvisl lnepntfspa nvdasvmyrk wkeskgkdre ytdiirkqvl gtkvdaerdg
      181 vkvpttlaey cvktktpapd egsdlfyddy yeddemeeea escygdedds gnees
//
LOCUS       XP_041337207             202 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid hydroperoxide glutathione peroxidase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337207
VERSION     XP_041337207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481273.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..202
                     /product="phospholipid hydroperoxide glutathione
                     peroxidase"
                     /calculated_mol_wt=22388
     Region          46..198
                     /region_name="GSH_Peroxidase"
                     /note="Glutathione (GSH) peroxidase family; tetrameric
                     selenoenzymes that catalyze the reduction of a variety of
                     hydroperoxides including lipid peroxidases, using GSH as a
                     specific electron donor substrate. GSH peroxidase contains
                     one selenocysteine residue per...; cd00340"
                     /db_xref="CDD:238207"
     Site            order(78,113,168)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:238207"
     Site            order(112,115,117,120,123,127)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238207"
     CDS             1..202
                     /gene="GPX4"
                     /coded_by="XM_041481273.1:41..649"
                     /db_xref="GeneID:121360999"
ORIGIN      
        1 mgwagalrga lwcsraaara allgpgliav rsmcahaddw rsakaiydft aldidgndvs
       61 lekyrgdvcv itnvaskugk tavnytqlvd lharyaergl rilgfpcnqf gkqepgtnaq
      121 ikefaagygv kfdmfskidv ngddahplwk wmkeqpkgrg tlgnaikwnf tkflinregq
      181 vvkryspmed pyvmekdlpa yl
//
LOCUS       XP_041337220            1033 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamate receptor ionotropic, NMDA 3B [Pyrgilauda ruficollis].
ACCESSION   XP_041337220
VERSION     XP_041337220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1033
                     /product="glutamate receptor ionotropic, NMDA 3B"
                     /calculated_mol_wt=114547
     Region          34..419
                     /region_name="PBP1_iGluR_NMDA_NR3"
                     /note="N-terminal leucine-isoleucine-valine-binding
                     protein (LIVBP)-like domain of the NR3 subunit of NMDA
                     receptor family; cd06377"
                     /db_xref="CDD:380600"
     Site            order(97..102,104..105,138..139,196,200,220,222,334..337,
                     341..343)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:380600"
     Site            order(98..101,105,108,138,358)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:380600"
     Region          436..832
                     /region_name="PBP2_iGluR_NMDA_Nr3"
                     /note="The ligand-binding domain of the NR3 subunit of
                     ionotropic NMDA (N-methyl-D-aspartate) glutamate
                     receptors, a member of the type 2 periplasmic binding fold
                     protein superfamily; cd13720"
                     /db_xref="CDD:270438"
     Site            order(555..558,560,562..564,705,724..725,729,769,792..794,
                     797,803,819..822,825)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270438"
     Site            order(555..557,562,724..726,768..769)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270438"
     Region          598..865
                     /region_name="Lig_chan"
                     /note="Ligand-gated ion channel; pfam00060"
                     /db_xref="CDD:459656"
     CDS             1..1033
                     /gene="GRIN3B"
                     /coded_by="XM_041481286.1:222..3323"
                     /db_xref="GeneID:121361001"
ORIGIN      
        1 maglralwll aaalgaaggh phpcrvpapp gpdlgpspgp tvrlgallpp apararlraa
       61 laraagtgig tgpggspgev tlphnlslev vgggpaardp gslarwlcga lagrgvaavl
      121 alprsrrell qldflaaalq vpfvsildtr wplpfraqsp fhfhmdrqss letlldvlvs
      181 vlqandwqet slvlchpwdi dsflelwaqr sqlflrtvld lgyldeprat rylrqhgdrv
      241 rtlsspvlll gcdlhrarlv fqaaeelglp pqefhwmlgf plstselqte glppgllafg
      301 evsrpplelf vqdmvglvsq aiaraarglp dpaqlqttgn cnerhragse spglflarfl
      361 antsfhgqtg lvrventalv rpeqqfriws lrrdsqgvpt wmtvgtwshg kleleevvwq
      421 sqrqhkspge aaegartrlr vvtlvehpfv ftrevdeegn cpagqlcldp gtndsavlda
      481 lfekigngng svpqeykkcc ygycidllek laedmafdfe lyivgdgkyg awkngrwtgl
      541 vgdllsgtah mavtsfsins arskvidfts pffstslgil vrtkdtaspi gafmwplhwt
      601 mwvgifvalh mtalfltlye wkspygmtph grnrmkifsy ssalnlcyai lfgrtvsskt
      661 pkcctgrflm nlwaifcllv lssytanlaa vmvgdktfee lsgihdpklh hpsqgfrfgt
      721 vwessaeeyi kksfpemhey mrrynvpttp dgvtmlktep aklnafimdk slldyevsid
      781 sdcklltvgk pfaiegygig lpqnspltsn vsefisryks sgfidllhdk wykmvpcgkr
      841 vfavtetlqm giyhfsglfv llciglsgsl ltslgehvfy rlvlprirrk kkfsywlhts
      901 qkihralnmg teerksqqlk lekrcepqpr sapaaaqpws alrkearrvr fqldkapped
      961 egsppwhpgn grppqpldra agenelrele ekiqemrdql raallrksel vsslgiavrh
     1021 rprrawacts hih
//
LOCUS       XP_041337232             720 aa            linear   VRT 06-MAY-2021
DEFINITION  membralin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337232
VERSION     XP_041337232.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481298.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..720
                     /product="membralin isoform X1"
                     /calculated_mol_wt=79678
     Region          35..419
                     /region_name="Membralin"
                     /note="Tumour-associated protein; pfam09746"
                     /db_xref="CDD:462877"
     CDS             1..720
                     /gene="TMEM259"
                     /coded_by="XM_041481298.1:1..2163"
                     /db_xref="GeneID:121361009"
ORIGIN      
        1 msenqpnann hhpannagaa ggnnrgvrnp nlnqnplinv rdrlfhalff kmavtyarlf
       61 ppsfrrvfef fvllkalfvl filayihiaf srspincleh vrdkwprdgi lrveiqrnss
      121 rapiflqfcg vdkfpgmvve stteeeeeee eemtvdmfen ssikfeldie pkvflkpsrv
      181 sstelphnds qefsfsdaat kgmqplretv sefemlarav wpqeeyivey sleygflrls
      241 qstrqrlsip vmvvtldptr dqcfgdrfsr llldeflgyd dilmssvkal aeneenkgfl
      301 rnvvsgehyr fvsmwmarts ylaafvimvi ftlsvsmllr yshhqifvfi vdllqmlemn
      361 mtiafpaapl ltvilalvgm eaimseffnd tttafyiili vwladqydai cchtntskrh
      421 wlrffylyhf afyayhyrfn gqysslalvt swlfiqhsmi yffhhyelpa ilqqiriqem
      481 llqnqqvgqg tqttlqdnln nnttaapvea ggrraplapg plgegggpaa lspgeassvi
      541 aaatsvgsdl nwvaetaaiv teasflsdls ttlleptvvh eamangtpqe aatasglvar
      601 irvssdhpet amgsitievt stsvvaaada spsagaaplq egvvsspslp kqtealegsn
      661 srakpsgknc tgsssvaepl pasggdsdqd rgledrgess pcpapaertp ssepssrnls
//
LOCUS       XP_041337240             702 aa            linear   VRT 06-MAY-2021
DEFINITION  membralin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041337240
VERSION     XP_041337240.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481306.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..702
                     /product="membralin isoform X2"
                     /calculated_mol_wt=77630
     Region          35..401
                     /region_name="Membralin"
                     /note="Tumour-associated protein; pfam09746"
                     /db_xref="CDD:462877"
     CDS             1..702
                     /gene="TMEM259"
                     /coded_by="XM_041481306.1:1..2109"
                     /db_xref="GeneID:121361009"
ORIGIN      
        1 msenqpnann hhpannagaa ggnnrgvrnp nlnqnplinv rdrlfhalff kmavtyarlf
       61 ppsfrrvfef fvllkalfvl filayihiaf srspincleh vrdkwprdgi lrveiqrnss
      121 rapiflqfcg vdkfpgmvve stteeeeeee eemtvdmfen ssikfeldie pkvflkpsrv
      181 sstelphnds qefsfsdaat kvwpqeeyiv eysleygflr lsqstrqrls ipvmvvtldp
      241 trdqcfgdrf srllldeflg yddilmssvk alaeneenkg flrnvvsgeh yrfvsmwmar
      301 tsylaafvim viftlsvsml lryshhqifv fivdllqmle mnmtiafpaa plltvilalv
      361 gmeaimseff ndtttafyii livwladqyd aicchtntsk rhwlrffyly hfafyayhyr
      421 fngqysslal vtswlfiqhs miyffhhyel pailqqiriq emllqnqqvg qgtqttlqdn
      481 lnnnttaapv eaggrrapla pgplgegggp aalspgeass viaaatsvgs dlnwvaetaa
      541 ivteasflsd lsttlleptv vheamangtp qeaatasglv arirvssdhp etamgsitie
      601 vtstsvvaaa daspsagaap lqegvvssps lpkqtealeg snsrakpsgk nctgsssvae
      661 plpasggdsd qdrgledrge sspcpapaer tpssepssrn ls
//
LOCUS       XP_041337253             198 aa            linear   VRT 06-MAY-2021
DEFINITION  GTP-binding protein Di-Ras1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337253
VERSION     XP_041337253.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481319.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="GTP-binding protein Di-Ras1"
                     /calculated_mol_wt=22286
     Region          7..169
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            14..21
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206711"
     Site            order(16..22,64,121..122,124,150..152)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206711"
     Site            39
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206711"
     Site            42..44
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206711"
     Site            61..64
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206711"
     Site            order(63..64,80..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206711"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206711"
     Site            150..152
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206711"
     CDS             1..198
                     /gene="DIRAS1"
                     /coded_by="XM_041481319.1:69..665"
                     /db_xref="GeneID:121361019"
ORIGIN      
        1 mpeqsndyrv vvfgaggvgk sslvlrfvkg tfrdtyipti edtyrqvisc dksvctlqit
       61 dttgshqfpa mqrlsiskgh afilvfsvts kqsleelkpi yqqivqikgs vesipimlvg
      121 nkcdetqrev esregeamak ewkcafmets akmnynvkel fqellnlekr rnvsltidgk
      181 rsskqkrtdk ikgkcsim
//
LOCUS       XP_041337266             373 aa            linear   VRT 06-MAY-2021
DEFINITION  granzyme M-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337266
VERSION     XP_041337266.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481332.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="granzyme M-like"
                     /calculated_mol_wt=39454
     Region          131..359
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            131
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(171,219,314)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(308,331,333)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..373
                     /gene="LOC121361027"
                     /coded_by="XM_041481332.1:1..1122"
                     /db_xref="GeneID:121361027"
ORIGIN      
        1 msqtcifgve gvnfclqsra lggpwvfptp tgvtlwvllp lpaplscipa pllpcpavtr
       61 hpgllqlggc sgkrgeggmg argclgplll lllpplpwge hraggsgvgs eslagavaga
      121 ggdrtwlqps iigghdakpr srpymvslqf rgvhacgaal lqrswaltaa hcqprgswdk
      181 grlvvglhew qkrgastqtf siraacphpg ynrrtmendl lllqldgkvt lsstrqlipl
      241 asrepapgar csvagwgvvd rqgrrlsptl qelnvtvmdk rmcnnsrfwr geigpgmicf
      301 hgqhrgsgpt kgdsggplvc gkrpavagvm sfnsknaadp fkppvatstv kykkwiqktl
      361 rrgcgsgqpk htg
//
LOCUS       XP_041337275             188 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor expression-enhancing protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041337275
VERSION     XP_041337275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="receptor expression-enhancing protein 6"
                     /calculated_mol_wt=21100
     Region          66..143
                     /region_name="TB2_DP1_HVA22"
                     /note="TB2/DP1, HVA22 family; pfam03134"
                     /db_xref="CDD:460820"
     CDS             1..188
                     /gene="REEP6"
                     /coded_by="XM_041481341.1:94..660"
                     /db_xref="GeneID:121361034"
ORIGIN      
        1 matvlqrler flhspgpigd llaqleartg vqrlylatgs vaflglylmf gygasllcni
       61 igfvypayvs ikaiesnnke ddtmwltywv vygvfsiaef fsdlflywfp fyyagkclfl
      121 vwcmapvpwn gsqliyhnvi rpfflkhhqa vdnmmgdigt kaldaassvt regvktslnl
      181 adlvqkvk
//
LOCUS       XP_041337282             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337282
VERSION     XP_041337282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481348.1:317..646"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337290             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337290
VERSION     XP_041337290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481356.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481356.1:97..426"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337297             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337297
VERSION     XP_041337297.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481363.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481363.1:93..422"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337305             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337305
VERSION     XP_041337305.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481371.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481371.1:122..451"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337316             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337316
VERSION     XP_041337316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481382.1:64..393"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337325             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337325
VERSION     XP_041337325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481391.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481391.1:68..397"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337334             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337334
VERSION     XP_041337334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481400.1:56..385"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337343             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337343
VERSION     XP_041337343.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481409.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481409.1:53..382"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337352             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337352
VERSION     XP_041337352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481418.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481418.1:62..391"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337362             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337362
VERSION     XP_041337362.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481428.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481428.1:46..375"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337372             109 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0449 protein C19orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041337372
VERSION     XP_041337372.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481438.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="UPF0449 protein C19orf25 homolog"
                     /calculated_mol_wt=12153
     Region          4..103
                     /region_name="UPF0449"
                     /note="Uncharacterized protein family UPF0449; pfam15136"
                     /db_xref="CDD:464522"
     CDS             1..109
                     /gene="CUNH19orf25"
                     /coded_by="XM_041481438.1:46..375"
                     /db_xref="GeneID:121361043"
ORIGIN      
        1 msskakrvlp trpeppsaeq iladvqgtlp sdpvfvlpae ppqdhgpapg cpepaaeere
       61 rlyrqirsyv gmnaglqqsr erlrerrrel qrvgealerg iaemrqkaf
//
LOCUS       XP_041337385            1405 aa            linear   VRT 06-MAY-2021
DEFINITION  protein strawberry notch homolog 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337385
VERSION     XP_041337385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1405
                     /product="protein strawberry notch homolog 2 isoform X1"
                     /calculated_mol_wt=157555
     Region          228..518
                     /region_name="AAA_34"
                     /note="P-loop containing NTP hydrolase pore-1; pfam13872"
                     /db_xref="CDD:464010"
     Region          745..1023
                     /region_name="Helicase_C_4"
                     /note="C-terminal domain on Strawberry notch homolog;
                     pfam13871"
                     /db_xref="CDD:464009"
     CDS             1..1405
                     /gene="SBNO2"
                     /coded_by="XM_041481451.1:265..4482"
                     /db_xref="GeneID:121361087"
ORIGIN      
        1 mdggnsfpqh qqpgdavrgi pglrsqlavp dvensmlaad swsscypvsf ptssfpsenq
       61 qyfsppqdfy mdsisrphfl dtnyaavdpt dflqkngdfp qdssyldels nnnslfsspa
      121 dslsdiadpk dflpadslsh vptlwdvntp qqnqielfsp stpfpglnss sdhvpavpnt
      181 pllisyqsqa paeeedegee eeteelgqte tyaeyipsks kigkhhpdlv vetstlssvp
      241 ppdityslsl pcsvadkgsl salqleaiiy acqqhevllp ngqragflig dgagvgkgrt
      301 vagiifenyl kgrkkalwfs vsndlkydae rdlkdieash ipvhalnkik ygdtatsegv
      361 lfatysalig esqaggqhrt rlkqilewcr enfegvivfd echkaknass tkmgkavldl
      421 qnklprarvv yasatgasep knmiymsrlg iwgegtpfra fdeflhaiek rgvgameiva
      481 mdmkvsgmyi arqlsftgvt frieeiplde qykavydkaa klwaealmvf qqaadcigle
      541 srkslwgqfw sahqrffkyl ciaakvrrlv elaqeelard kciviglqst geartrevld
      601 endghlncfv saaegvflsl iqkhfpsnkr krekgtvikr krrprgrcpk alrgpcdqgv
      661 vikisddsst dsdmgldsdl tsspesllet ddvifvdhtf sedrggfhml psqkelhglr
      721 elkvekmkqd llakvkalgk elplntldel idyfggpenv aemtgrkgrv vrrpdgsvvf
      781 esraeqglsi dhvnlkeker fmqgeklvai iseasssgis lqadrrvknq krrvhmtlel
      841 pwsadraiqq fgrthrsnqv sapeyvflis elagerrfas ivakrleslg althgdrrat
      901 esrdlskynf enkygakald evlhtilnha esrvpvprsy krgediffhe mkqgllsvgi
      961 gcsqmkygta smekdcsitk flnrilglev dkqnvlfqyf sdtfeyliek dkkegkydmg
     1021 ildlapgvde iyeeskeifl tpghpqdgqv vfykisvdrg lkweeayeks lkltgtfdgf
     1081 ylsykvrgsk ytcllaeqcr gknfilykpn igkqsqlesl dslqkkyrrv vpeeakehwe
     1141 ssyhfslknc nhavwnksck liqegkecfq gmrlrhyyml cgallrvwsr iagvmadits
     1201 ssylqivrlk tkekkkqvgi kipescvhrv reelkqmded vkrkqsrllq aqeqsspfsl
     1261 plhilpgpgl plpslcqdei ldltysppsn sipdlvlnpe trelcfssep plqpqqqhgl
     1321 sfgfghapgl ehstapgpsl heppallppa plqqpqedfl qqdgninfre iledmlrtlh
     1381 vpsqenmlpp erqsviqfsg pfpdf
//
LOCUS       XP_041337395            1319 aa            linear   VRT 06-MAY-2021
DEFINITION  protein strawberry notch homolog 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337395
VERSION     XP_041337395.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481461.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1319
                     /product="protein strawberry notch homolog 2 isoform X2"
                     /calculated_mol_wt=148297
     Region          142..432
                     /region_name="AAA_34"
                     /note="P-loop containing NTP hydrolase pore-1; pfam13872"
                     /db_xref="CDD:464010"
     Region          659..937
                     /region_name="Helicase_C_4"
                     /note="C-terminal domain on Strawberry notch homolog;
                     pfam13871"
                     /db_xref="CDD:464009"
     CDS             1..1319
                     /gene="SBNO2"
                     /coded_by="XM_041481461.1:193..4152"
                     /db_xref="GeneID:121361087"
ORIGIN      
        1 msqmqfwlkf pslykdssyl delsnnnslf sspadslsdi adpkdflpad slshvptlwd
       61 vntpqqnqie lfspstpfpg lnsssdhvpa vpntpllisy qsqapaeeed egeeeeteel
      121 gqtetyaeyi pskskigkhh pdlvvetstl ssvpppdity slslpcsvad kgslsalqle
      181 aiiyacqqhe vllpngqrag fligdgagvg kgrtvagiif enylkgrkka lwfsvsndlk
      241 ydaerdlkdi eashipvhal nkikygdtat segvlfatys aligesqagg qhrtrlkqil
      301 ewcrenfegv ivfdechkak nasstkmgka vldlqnklpr arvvyasatg asepknmiym
      361 srlgiwgegt pfrafdeflh aiekrgvgam eivamdmkvs gmyiarqlsf tgvtfrieei
      421 pldeqykavy dkaaklwaea lmvfqqaadc iglesrkslw gqfwsahqrf fkylciaakv
      481 rrlvelaqee lardkcivig lqstgeartr evldendghl ncfvsaaegv flsliqkhfp
      541 snkrkrekgt vikrkrrprg rcpkalrgpc dqgvvikisd dsstdsdmgl dsdltsspes
      601 lletddvifv dhtfsedrgg fhmlpsqkel hglrelkvek mkqdllakvk algkelplnt
      661 ldelidyfgg penvaemtgr kgrvvrrpdg svvfesraeq glsidhvnlk ekerfmqgek
      721 lvaiiseass sgislqadrr vknqkrrvhm tlelpwsadr aiqqfgrthr snqvsapeyv
      781 fliselager rfasivakrl eslgalthgd rratesrdls kynfenkyga kaldevlhti
      841 lnhaesrvpv prsykrgedi ffhemkqgll svgigcsqmk ygtasmekdc sitkflnril
      901 glevdkqnvl fqyfsdtfey liekdkkegk ydmgildlap gvdeiyeesk eifltpghpq
      961 dgqvvfykis vdrglkweea yekslkltgt fdgfylsykv rgskytclla eqcrgknfil
     1021 ykpnigkqsq lesldslqkk yrrvvpeeak ehwessyhfs lkncnhavwn ksckliqegk
     1081 ecfqgmrlrh yymlcgallr vwsriagvma ditsssylqi vrlktkekkk qvgikipesc
     1141 vhrvreelkq mdedvkrkqs rllqaqeqss pfslplhilp gpglplpslc qdeildltys
     1201 ppsnsipdlv lnpetrelcf ssepplqpqq qhglsfgfgh apglehstap gpslheppal
     1261 lppaplqqpq edflqqdgni nfreiledml rtlhvpsqen mlpperqsvi qfsgpfpdf
//
LOCUS       XP_041337409            1155 aa            linear   VRT 06-MAY-2021
DEFINITION  rho GTPase-activating protein 45 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337409
VERSION     XP_041337409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1155
                     /product="rho GTPase-activating protein 45 isoform X1"
                     /calculated_mol_wt=126355
     Region          307..538
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Region          708..758
                     /region_name="C1_GMIP-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in the GEM-interacting protein (GMIP)-like family;
                     cd20816"
                     /db_xref="CDD:410366"
     Region          766..980
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cl02570"
                     /db_xref="CDD:470621"
     Site            order(804,841,845,940,943..944,971)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            804
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     CDS             1..1155
                     /gene="ARHGAP45"
                     /coded_by="XM_041481475.1:338..3805"
                     /db_xref="GeneID:121361094"
ORIGIN      
        1 mlgraagkks yspsaaagra hppqrsldsl prtpavrlte lsrkdcleas gssgelpsgs
       61 aklssspsav gtlkrptsls rhasaasfsl ptapragpkg hktpmayspm eggespfidp
      121 edisqlladv arfadalekl rdvvlrddpk epqrplahec lgetlrilrq vinkypllnt
      181 letltaagtl iskvkgfhye snneadkref ekavetiavs fsstvseflm gevdsstlls
      241 ippsdqsqtm eslcggipgp rgdgvssgmd scdtarppae evdvmlqrce ggvdaalqya
      301 ktiskymkdl igyvdkrttv eaefakalqk ianiykqiis qetsmpflsi yllaleqdme
      361 hgisvvqaas alqqqsflqp lmvrrlehek rrkeikeqwh raqrklqeae gnlrkakqiy
      421 mqrseehdka kymavkaeee qqnttssitt ktldkkrrle eeaknkaeea matyrtcvad
      481 antqkqeled tkvnslrqih emikqsdqvi ksvtisfyql mhmqtaplpv nfqtlcessk
      541 lydpgqqyas hvrqlqrgde pdvqydfepy vshnawspft qaqkgsfsat efstsaegag
      601 agsegaagak espsgagaae rrggrghkvh kswptsvtda dssldsnage fshklqrlss
      661 ngtassseel eekdgtttpf eqsingitpe laaptgpfrn vglskaaqth rlrklrapsk
      721 crecnsyvyf qgaeceecyl achkkcletl aiqcghkklq gklqlfgqdf tkasrgspdg
      781 ipfivkkcis eiekralktk giyrvngvkt rveklcqafe ngkelvelsq asphdisnvl
      841 klylrqlpep lmpfrlynel mglakeslqg geakgrsgkg spelvdrgad tdrvvlslvl
      901 klrellkelp senmatlqfl lqhlrrimev eqdnkmtsgn lgivfgptlm rprptdatis
      961 lsslvdyphq ariiealiif yptifehkdm apaepsrrgs gateevasga eqvhagsqpv
     1021 aplgtspyle lpsekgnlaf sadslaesgd rsvdsdsele dtgeprthlt kqgsetstee
     1081 vnfydegseg lrsrscsvgq sdaegsaprc cspgeeqsdl eehaesrspg sprdatnqpg
     1141 ssrghgshel qprli
//
LOCUS       XP_041337417            1146 aa            linear   VRT 06-MAY-2021
DEFINITION  rho GTPase-activating protein 45 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337417
VERSION     XP_041337417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1146
                     /product="rho GTPase-activating protein 45 isoform X2"
                     /calculated_mol_wt=125636
     Region          298..529
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Region          699..749
                     /region_name="C1_GMIP-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in the GEM-interacting protein (GMIP)-like family;
                     cd20816"
                     /db_xref="CDD:410366"
     Region          757..971
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cl02570"
                     /db_xref="CDD:470621"
     Site            order(795,832,836,931,934..935,962)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            795
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     CDS             1..1146
                     /gene="ARHGAP45"
                     /coded_by="XM_041481483.1:120..3560"
                     /db_xref="GeneID:121361094"
ORIGIN      
        1 mfsrkkreli ktpsiskksr agspvpqslp elsrkdclea sgssgelpsg saklssspsa
       61 vgtlkrptsl srhasaasfs lptapragpk ghktpmaysp meggespfid pedisqllad
      121 varfadalek lrdvvlrddp kepqrplahe clgetlrilr qvinkyplln tletltaagt
      181 liskvkgfhy esnneadkre fekavetiav sfsstvsefl mgevdsstll sippsdqsqt
      241 meslcggipg prgdgvssgm dscdtarppa eevdvmlqrc eggvdaalqy aktiskymkd
      301 ligyvdkrtt veaefakalq kianiykqii sqetsmpfls iyllaleqdm ehgisvvqaa
      361 salqqqsflq plmvrrlehe krrkeikeqw hraqrklqea egnlrkakqi ymqrseehdk
      421 akymavkaee eqqnttssit tktldkkrrl eeeaknkaee amatyrtcva dantqkqele
      481 dtkvnslrqi hemikqsdqv iksvtisfyq lmhmqtaplp vnfqtlcess klydpgqqya
      541 shvrqlqrgd epdvqydfep yvshnawspf tqaqkgsfsa tefstsaega gagsegaaga
      601 kespsgagaa errggrghkv hkswptsvtd adssldsnag efshklqrls sngtasssee
      661 leekdgtttp feqsingitp elaaptgpfr nvglskaaqt hrlrklraps kcrecnsyvy
      721 fqgaeceecy lachkkclet laiqcghkkl qgklqlfgqd ftkasrgspd gipfivkkci
      781 seiekralkt kgiyrvngvk trveklcqaf engkelvels qasphdisnv lklylrqlpe
      841 plmpfrlyne lmglakeslq ggeakgrsgk gspelvdrga dtdrvvlslv lklrellkel
      901 psenmatlqf llqhlrrime veqdnkmtsg nlgivfgptl mrprptdati slsslvdyph
      961 qariiealii fyptifehkd mapaepsrrg sgateevasg aeqvhagsqp vaplgtspyl
     1021 elpsekgnla fsadslaesg drsvdsdsel edtgeprthl tkqgsetste evnfydegse
     1081 glrsrscsvg qsdaegsapr ccspgeeqsd leehaesrsp gsprdatnqp gssrghgshe
     1141 lqprli
//
LOCUS       XP_041337426            1129 aa            linear   VRT 06-MAY-2021
DEFINITION  rho GTPase-activating protein 45 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337426
VERSION     XP_041337426.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481492.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1129
                     /product="rho GTPase-activating protein 45 isoform X3"
                     /calculated_mol_wt=123663
     Region          307..538
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Region          682..732
                     /region_name="C1_GMIP-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in the GEM-interacting protein (GMIP)-like family;
                     cd20816"
                     /db_xref="CDD:410366"
     Region          740..954
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cl02570"
                     /db_xref="CDD:470621"
     Site            order(778,815,819,914,917..918,945)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            778
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     CDS             1..1129
                     /gene="ARHGAP45"
                     /coded_by="XM_041481492.1:338..3727"
                     /db_xref="GeneID:121361094"
ORIGIN      
        1 mlgraagkks yspsaaagra hppqrsldsl prtpavrlte lsrkdcleas gssgelpsgs
       61 aklssspsav gtlkrptsls rhasaasfsl ptapragpkg hktpmayspm eggespfidp
      121 edisqlladv arfadalekl rdvvlrddpk epqrplahec lgetlrilrq vinkypllnt
      181 letltaagtl iskvkgfhye snneadkref ekavetiavs fsstvseflm gevdsstlls
      241 ippsdqsqtm eslcggipgp rgdgvssgmd scdtarppae evdvmlqrce ggvdaalqya
      301 ktiskymkdl igyvdkrttv eaefakalqk ianiykqiis qetsmpflsi yllaleqdme
      361 hgisvvqaas alqqqsflqp lmvrrlehek rrkeikeqwh raqrklqeae gnlrkakqiy
      421 mqrseehdka kymavkaeee qqnttssitt ktldkkrrle eeaknkaeea matyrtcvad
      481 antqkqeled tkvnslrqih emikqsdqvi ksvtisfyql mhmqtaplpv nfqtlcessk
      541 lydpgqqyas hvrqlqrgde pdvqydfepy vshnawspft qaqkgsfsat efstsaegag
      601 agsegaagak espsgagaae rrgefshklq rlssngtass seeleekdgt ttpfeqsing
      661 itpelaaptg pfrnvglska aqthrlrklr apskcrecns yvyfqgaece ecylachkkc
      721 letlaiqcgh kklqgklqlf gqdftkasrg spdgipfivk kciseiekra lktkgiyrvn
      781 gvktrveklc qafengkelv elsqasphdi snvlklylrq lpeplmpfrl ynelmglake
      841 slqggeakgr sgkgspelvd rgadtdrvvl slvlklrell kelpsenmat lqfllqhlrr
      901 imeveqdnkm tsgnlgivfg ptlmrprptd atislsslvd yphqariiea liifyptife
      961 hkdmapaeps rrgsgateev asgaeqvhag sqpvaplgts pylelpsekg nlafsadsla
     1021 esgdrsvdsd seledtgepr thltkqgset steevnfyde gseglrsrsc svgqsdaegs
     1081 aprccspgee qsdleehaes rspgsprdat nqpgssrghg shelqprli
//
LOCUS       XP_041337438             307 aa            linear   VRT 06-MAY-2021
DEFINITION  calponin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041337438
VERSION     XP_041337438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481504.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..307
                     /product="calponin-2"
                     /calculated_mol_wt=33620
     Region          27..135
                     /region_name="CH_CNN2"
                     /note="calponin homology (CH) domain found in calponin-2;
                     cd21283"
                     /db_xref="CDD:409132"
     Site            order(30,34,83,85..86,89..90,92,102..110,116,118..119,
                     121..122,125..126,129)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409132"
     Region          166..190
                     /region_name="Calponin"
                     /note="Calponin family repeat; pfam00402"
                     /db_xref="CDD:459803"
     Region          206..230
                     /region_name="Calponin"
                     /note="Calponin family repeat; pfam00402"
                     /db_xref="CDD:459803"
     Region          245..268
                     /region_name="Calponin"
                     /note="Calponin family repeat; pfam00402"
                     /db_xref="CDD:459803"
     CDS             1..307
                     /gene="CNN2"
                     /coded_by="XM_041481504.1:63..986"
                     /db_xref="GeneID:121361114"
ORIGIN      
        1 msssqfnkgp syglsaevkn rlaqkydpqk eaelrtwies vtgkqigpdf qkglkdgvil
       61 celmnklqpn svrkinhsaq nwhqlenlsn fikamasygm npvdlfeand lfesgnltqv
      121 qvsllalagm aktkglqsgv digvkysekq qrnfdeakmk agqcviglqm gtnkcasqsg
      181 mtaygtrrhl ydpknqilpp mdhstislqm gtnkcasqvg mtapgtrrhi ydakmgtekc
      241 dnssmslqmg snqganqsgq vfglgrqiyd pkycpqgsqg evanaagdls gdppgyryyr
      301 eeeeesy
//
LOCUS       XP_041337452             398 aa            linear   VRT 06-MAY-2021
DEFINITION  paralemmin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337452
VERSION     XP_041337452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="paralemmin-1 isoform X1"
                     /calculated_mol_wt=43033
     Region          18..354
                     /region_name="Paralemmin"
                     /note="pfam03285"
                     /db_xref="CDD:460875"
     CDS             1..398
                     /gene="PALM"
                     /coded_by="XM_041481518.1:49..1245"
                     /db_xref="GeneID:121361120"
ORIGIN      
        1 mevveastlq qerlqaiaek rkrqteienk rrqleddrrq lqhlkskalr erwllegapa
       61 sateeeeamk kqmqedevkt keleetiqrl ekelemlens ssvastkenl seaagkeekk
      121 aeavpntqks plgtvkggrl sspspadkrv ssspmkaveg semmkaamys veitvekdrv
      181 tgetkvlsst tmlpqnhclq gvkvyedelk vvhavsaedg alqngahpls ssevdellhk
      241 adeatlseaa grqtpakagk gggsapgsqk ptprreitgl qakvppgegt epsqeqpvtm
      301 ifmgyqnved enetkkvlgl egtikaelvv iedaeskpep ahkdhtppng talepaaaqa
      361 lgeegaggqk pganatdake aeqetdvkkq rckcctvm
//
LOCUS       XP_041337461             389 aa            linear   VRT 06-MAY-2021
DEFINITION  paralemmin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041337461
VERSION     XP_041337461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="paralemmin-1 isoform X2"
                     /calculated_mol_wt=42194
     Region          18..345
                     /region_name="Paralemmin"
                     /note="pfam03285"
                     /db_xref="CDD:460875"
     CDS             1..389
                     /gene="PALM"
                     /coded_by="XM_041481527.1:49..1218"
                     /db_xref="GeneID:121361120"
ORIGIN      
        1 mevveastlq qerlqaiaek rkrqteienk rrqleddrrq lqhlkskalr erwllegapa
       61 sateeeeamk kqmqedevkt keleetiqrl ekelemlens ssvastkenl seaagkeekk
      121 aeavpntqks plgtvkadkr vssspmkave gsemmkaamy sveitvekdr vtgetkvlss
      181 ttmlpqnhcl qgvkvyedel kvvhavsaed galqngahpl sssevdellh kadeatlsea
      241 agrqtpakag kgggsapgsq kptprreitg lqakvppgeg tepsqeqpvt mifmgyqnve
      301 denetkkvlg legtikaelv viedaeskpe pahkdhtppn gtalepaaaq algeegaggq
      361 kpganatdak eaeqetdvkk qrckcctvm
//
LOCUS       XP_041337474             274 aa            linear   VRT 06-MAY-2021
DEFINITION  guanidinoacetate N-methyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041337474
VERSION     XP_041337474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="guanidinoacetate N-methyltransferase"
                     /calculated_mol_wt=30322
     Region          101..204
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cd02440"
                     /db_xref="CDD:100107"
     Site            order(105..111,128..129,153..155,173)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..274
                     /gene="GAMT"
                     /coded_by="XM_041481540.1:111..935"
                     /db_xref="GeneID:121361133"
ORIGIN      
        1 mhstvspgav tssappehpr atcdlsglaa pwcpvptmss gaaagpifse gedcraawra
       61 atagydepda hleilgkpvm erwetpymhs latvaaskgg rvlevgfgma iaaskvqefg
      121 ieehwiiecn egvfrrleqw akaqphkvvp lkglwedvvp tlpdghfsgi lydtyplsea
      181 twhthqfnfi qghafrllrp ggvltycnlt swgellktry sdiekmfeet qvgpllqagf
      241 rrenistrvm elqpppecry yshprmitpt vlkh
//
LOCUS       XP_041337483             216 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] iron-sulfur protein 7,
            mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041337483
VERSION     XP_041337483.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481549.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="NADH dehydrogenase [ubiquinone] iron-sulfur
                     protein 7, mitochondrial"
                     /calculated_mol_wt=23990
     Region          66..213
                     /region_name="PRK06411"
                     /note="NADH-quinone oxidoreductase subunit NuoB"
                     /db_xref="CDD:235797"
     CDS             1..216
                     /gene="NDUFS7"
                     /coded_by="XM_041481549.1:106..756"
                     /db_xref="GeneID:121361134"
ORIGIN      
        1 maalgrlrlp ahgvlgwrpg svspvhaqll hqtpaadrad ssvqvqkssa vvqgksyvps
       61 srgeyvitkl ddlvnwarrs slwpmtfgla ccavemmhma aprydmdrfg vvfrasprqa
      121 dvmivagtlt nkmapalrkv ydqmpepryv vsmgscangg gyyhysysvv rgcdrivpvd
      181 iyvpgcppta eallygilql qrkikrerrm qiwyrk
//
LOCUS       XP_041337496             954 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: mitotic interactor and substrate of PLK1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337496
VERSION     XP_041337496.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481562.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..954
                     /product="LOW QUALITY PROTEIN: mitotic interactor and
                     substrate of PLK1"
                     /calculated_mol_wt=105941
     Region          577..949
                     /region_name="AKAP2_C"
                     /note="A-kinase anchor protein 2 C-terminus; pfam15304"
                     /db_xref="CDD:464630"
     CDS             1..954
                     /gene="LOC121361141"
                     /coded_by="XM_041481562.1:24..2888"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121361141"
ORIGIN      
        1 matppcpctg trvrwhvgar gtsechgsep raaprawdqp raaprawdqp raaprawdql
       61 qqgddstgiw galstepnvl lgtahsslvl slsgprrrpp srpptpqrcp pghapadtar
      121 lgapxghgdp cpdssmdrpa rsrplasael glrvtsklss gpclgqswhr sdssqemdrv
      181 trhlvfqlpq ashrhdslad lrassdddvf ssaqhssqrv engyswkrrs qspsyflegg
      241 rdvwtpspdr esklevvrsg slydlraykg erkpsklydd eeqdlyrvpp pnispekare
      301 lederkevir sqvmrkssti aerwssmdel gsistgvgsq gegrhtgsvp tsfaiwfdks
      361 spgraatpvd penidteqin fsaarqqflm lektnpgsff spgqqamspr pesvtkvsre
      421 ewyspematk gtrgyssaga ssqsgtdksv yqvygvssyk tpqkeevyap rkahtersyp
      481 igktsiltka gsredldsgl gemyneatag yasdgstsne tfhvdlrass nglgketrvs
      541 netpiereir mamereenlw kergiqrlts sselveiqtr pvlnihtspg pgrkgkdrgr
      601 aslyvqreie qetkreedlk rqgrllgayd rgtqqeleer rrvfeqeeap pekptplkra
      661 eerrswvkef aveqpsspsp aedtragrsi psytasiahf qlsqprfaas ersreqplvs
      721 qhasasaskw gsedswggkl pdstpspast avlpreylnl sfwkpkvsfv edmgtqsplr
      781 redgreeqyr lrtwkpqtsa lieeeirsdl qreeelqeqr rrlmdtysna vpqegsrsrh
      841 ssaasgasgn ysvsespass pashqtgilg lissftplrv tsssqgstet ltpdssrssp
      901 feerrkrvke dgkyagiepv dkvntevves trvfrhksvm aqrweagqyv rded
//
LOCUS       XP_041337508             586 aa            linear   VRT 06-MAY-2021
DEFINITION  mesoderm induction early response protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337508
VERSION     XP_041337508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="mesoderm induction early response protein 2
                     isoform X1"
                     /calculated_mol_wt=64522
     Region          204..259
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          314..358
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(314,344..345,347..348,350..352,354..356)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          368..571
                     /region_name="MIER1_3_C"
                     /note="Mesoderm induction early response protein 1/3
                     C-terminal; pfam19426"
                     /db_xref="CDD:437258"
     CDS             1..586
                     /gene="MIER2"
                     /coded_by="XM_041481574.1:22..1782"
                     /db_xref="GeneID:121361149"
ORIGIN      
        1 maeasvgrqs prvvpyparg lcpgepalqs aavvsmgsad hrlnlaeils qnygvreere
       61 eddtqekqks leeleksfsa sqssempfee llalygyeas dpiseqdses nditpnlpdm
      121 tldkeqiakd llsgeeeeet qssaddltps vtshdasdlf pnqpgsnnfl adedkepcss
      181 pcassmaeds evdsipsnec kkeimvgpqy qatvpilrln rhrqkvlfll ayenedqllw
      241 dpnilperev eeflyravkr qwdelsgssl pegevvkdne qalyelvkcn fnaeealrrl
      301 rfnvkvirde lcawseeecr nfehgfrvhg knfhliqank vrtrsvgecv eyyymwkkse
      361 rydyftqqtr lgrkkyvlhp gatdftdndl dgveventnr srssppipsa agcldahfgq
      421 dqiaiestep lsvestacsl gsisesgqgy ecstpsetnc sfdpseetps gavpvpcprh
      481 tvtpsepelc alppagpgla ekqetlqnsg etitmdftlp adineglpli agpvdldrdp
      541 eavvapaqvs lsvtdfglig igdvnsflta hqacpapvar seplsq
//
LOCUS       XP_041337516             581 aa            linear   VRT 06-MAY-2021
DEFINITION  mesoderm induction early response protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337516
VERSION     XP_041337516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="mesoderm induction early response protein 2
                     isoform X2"
                     /calculated_mol_wt=63937
     Region          204..254
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          309..353
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(309,339..340,342..343,345..347,349..351)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          363..566
                     /region_name="MIER1_3_C"
                     /note="Mesoderm induction early response protein 1/3
                     C-terminal; pfam19426"
                     /db_xref="CDD:437258"
     CDS             1..581
                     /gene="MIER2"
                     /coded_by="XM_041481582.1:22..1767"
                     /db_xref="GeneID:121361149"
ORIGIN      
        1 maeasvgrqs prvvpyparg lcpgepalqs aavvsmgsad hrlnlaeils qnygvreere
       61 eddtqekqks leeleksfsa sqssempfee llalygyeas dpiseqdses nditpnlpdm
      121 tldkeqiakd llsgeeeeet qssaddltps vtshdasdlf pnqpgsnnfl adedkepcss
      181 pcassmaeds evdsipsnec kkeimvgpqy qatvpilrln rhrqkayene dqllwdpnil
      241 pereveefly ravkrqwdel sgsslpegev vkdneqalye lvkcnfnaee alrrlrfnvk
      301 virdelcaws eeecrnfehg frvhgknfhl iqankvrtrs vgecveyyym wkkserydyf
      361 tqqtrlgrkk yvlhpgatdf tdndldgvev entnrsrssp pipsaagcld ahfgqdqiai
      421 esteplsves tacslgsise sgqgyecstp setncsfdps eetpsgavpv pcprhtvtps
      481 epelcalppa gpglaekqet lqnsgetitm dftlpadine glpliagpvd ldrdpeavva
      541 paqvslsvtd fgligigdvn sfltahqacp apvarsepls q
//
LOCUS       XP_041337524             578 aa            linear   VRT 06-MAY-2021
DEFINITION  mesoderm induction early response protein 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337524
VERSION     XP_041337524.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481590.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="mesoderm induction early response protein 2
                     isoform X3"
                     /calculated_mol_wt=63684
     Region          204..259
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          314..358
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(314,344..345,347..348,350..352,354..356)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     CDS             1..578
                     /gene="MIER2"
                     /coded_by="XM_041481590.1:22..1758"
                     /db_xref="GeneID:121361149"
ORIGIN      
        1 maeasvgrqs prvvpyparg lcpgepalqs aavvsmgsad hrlnlaeils qnygvreere
       61 eddtqekqks leeleksfsa sqssempfee llalygyeas dpiseqdses nditpnlpdm
      121 tldkeqiakd llsgeeeeet qssaddltps vtshdasdlf pnqpgsnnfl adedkepcss
      181 pcassmaeds evdsipsnec kkeimvgpqy qatvpilrln rhrqkvlfll ayenedqllw
      241 dpnilperev eeflyravkr qwdelsgssl pegevvkdne qalyelvkcn fnaeealrrl
      301 rfnvkvirde lcawseeecr nfehgfrvhg knfhliqank vrtrsvgecv eyyymwkkse
      361 rydyftqqtr lgrkkdftdn dldgvevent nrsrssppip saagcldahf gqdqiaiest
      421 eplsvestac slgsisesgq gyecstpset ncsfdpseet psgavpvpcp rhtvtpsepe
      481 lcalppagpg laekqetlqn sgetitmdft lpadineglp liagpvdldr dpeavvapaq
      541 vslsvtdfgl igigdvnsfl tahqacpapv arseplsq
//
LOCUS       XP_041337534             551 aa            linear   VRT 06-MAY-2021
DEFINITION  mesoderm induction early response protein 2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337534
VERSION     XP_041337534.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481600.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="mesoderm induction early response protein 2
                     isoform X4"
                     /calculated_mol_wt=60988
     Region          169..224
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          279..323
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(279,309..310,312..313,315..317,319..321)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          333..536
                     /region_name="MIER1_3_C"
                     /note="Mesoderm induction early response protein 1/3
                     C-terminal; pfam19426"
                     /db_xref="CDD:437258"
     CDS             1..551
                     /gene="MIER2"
                     /coded_by="XM_041481600.1:295..1950"
                     /db_xref="GeneID:121361149"
ORIGIN      
        1 mgsadhrlnl aeilsqnygv reereeddtq ekqksleele ksfsasqsse mpfeellaly
       61 gyeasdpise qdsesnditp nlpdmtldke qiakdllsge eeeetqssad dltpsvtshd
      121 asdlfpnqpg snnfladedk epcsspcass maedsevdsi psneckkeim vgpqyqatvp
      181 ilrlnrhrqk vlfllayene dqllwdpnil pereveefly ravkrqwdel sgsslpegev
      241 vkdneqalye lvkcnfnaee alrrlrfnvk virdelcaws eeecrnfehg frvhgknfhl
      301 iqankvrtrs vgecveyyym wkkserydyf tqqtrlgrkk yvlhpgatdf tdndldgvev
      361 entnrsrssp pipsaagcld ahfgqdqiai esteplsves tacslgsise sgqgyecstp
      421 setncsfdps eetpsgavpv pcprhtvtps epelcalppa gpglaekqet lqnsgetitm
      481 dftlpadine glpliagpvd ldrdpeavva paqvslsvtd fgligigdvn sfltahqacp
      541 apvarsepls q
//
LOCUS       XP_041337542             501 aa            linear   VRT 06-MAY-2021
DEFINITION  mesoderm induction early response protein 2 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337542
VERSION     XP_041337542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="mesoderm induction early response protein 2
                     isoform X5"
                     /calculated_mol_wt=55276
     Region          119..174
                     /region_name="ELM2"
                     /note="ELM2 domain; pfam01448"
                     /db_xref="CDD:460214"
     Region          229..273
                     /region_name="SANT_MTA3_like"
                     /note="Myb-Like Dna-Binding Domain of MTA3 and related
                     proteins; cd11661"
                     /db_xref="CDD:212559"
     Site            order(229,259..260,262..263,265..267,269..271)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212559"
     Region          283..486
                     /region_name="MIER1_3_C"
                     /note="Mesoderm induction early response protein 1/3
                     C-terminal; pfam19426"
                     /db_xref="CDD:437258"
     CDS             1..501
                     /gene="MIER2"
                     /coded_by="XM_041481608.1:141..1646"
                     /db_xref="GeneID:121361149"
ORIGIN      
        1 mpfeellaly gyeasdpise qdsesnditp nlpdmtldke qiakdllsge eeeetqssad
       61 dltpsvtshd asdlfpnqpg snnfladedk epcsspcass maedsevdsi psneckkeim
      121 vgpqyqatvp ilrlnrhrqk vlfllayene dqllwdpnil pereveefly ravkrqwdel
      181 sgsslpegev vkdneqalye lvkcnfnaee alrrlrfnvk virdelcaws eeecrnfehg
      241 frvhgknfhl iqankvrtrs vgecveyyym wkkserydyf tqqtrlgrkk yvlhpgatdf
      301 tdndldgvev entnrsrssp pipsaagcld ahfgqdqiai esteplsves tacslgsise
      361 sgqgyecstp setncsfdps eetpsgavpv pcprhtvtps epelcalppa gpglaekqet
      421 lqnsgetitm dftlpadine glpliagpvd ldrdpeavva paqvslsvtd fgligigdvn
      481 sfltahqacp apvarsepls q
//
LOCUS       XP_041337556             199 aa            linear   VRT 06-MAY-2021
DEFINITION  ephrin-A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041337556
VERSION     XP_041337556.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481622.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..199
                     /product="ephrin-A2"
                     /calculated_mol_wt=22813
     Region          29..157
                     /region_name="Ephrin-A_Ectodomain"
                     /note="Ectodomain of Ephrin A; cd10425"
                     /db_xref="CDD:259896"
     Site            order(56,95..99,111..112,119..124,126..127)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:259896"
     CDS             1..199
                     /gene="EFNA2"
                     /coded_by="XM_041481622.1:44..643"
                     /db_xref="GeneID:121361174"
ORIGIN      
        1 mvrcgaaall aallgvcvwt detgkvisdr favywnrsnp rfhrgdytve vsindyldiy
       61 cphyeeplpe rmeryilymv nyeghascdh rqrgfkrwec nrpdspngpl kfsekfqlft
      121 pfslgfefrp gheyyyisas ppntvdrpcl klkvyvrptn dslyespepi ftsnnsccsl
      181 rvppaalavv pvvwtllls
//
LOCUS       XP_041337569             619 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337569
VERSION     XP_041337569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X1"
                     /calculated_mol_wt=68640
     Region          33..>197
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <38..97
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          189..437
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          439..617
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..619
                     /gene="MED26"
                     /coded_by="XM_041481635.1:4783..6642"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mdtwncvcrr kkdlfslsqc lyfsacfcht alvlqihnmv avlevissle kypitkeale
       61 etrlgrline vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah
      121 nckpdsqlpa vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk
      181 ashevlqnss ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph
      241 tsspglvkps stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt
      301 yspkdsmpsp sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq
      361 gapegqhrht agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr
      421 dytvnldghv ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek
      481 qeqkpnlqsp feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest
      541 rkearkthvl apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis
      601 ldphgddgrl nilpyvcld
//
LOCUS       XP_041337576             619 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337576
VERSION     XP_041337576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X1"
                     /calculated_mol_wt=68640
     Region          33..>197
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <38..97
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          189..437
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          439..617
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..619
                     /gene="MED26"
                     /coded_by="XM_041481642.1:2174..4033"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mdtwncvcrr kkdlfslsqc lyfsacfcht alvlqihnmv avlevissle kypitkeale
       61 etrlgrline vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah
      121 nckpdsqlpa vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk
      181 ashevlqnss ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph
      241 tsspglvkps stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt
      301 yspkdsmpsp sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq
      361 gapegqhrht agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr
      421 dytvnldghv ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek
      481 qeqkpnlqsp feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest
      541 rkearkthvl apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis
      601 ldphgddgrl nilpyvcld
//
LOCUS       XP_041337584             619 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337584
VERSION     XP_041337584.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481650.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X1"
                     /calculated_mol_wt=68640
     Region          33..>197
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <38..97
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          189..437
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          439..617
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..619
                     /gene="MED26"
                     /coded_by="XM_041481650.1:2710..4569"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mdtwncvcrr kkdlfslsqc lyfsacfcht alvlqihnmv avlevissle kypitkeale
       61 etrlgrline vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah
      121 nckpdsqlpa vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk
      181 ashevlqnss ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph
      241 tsspglvkps stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt
      301 yspkdsmpsp sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq
      361 gapegqhrht agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr
      421 dytvnldghv ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek
      481 qeqkpnlqsp feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest
      541 rkearkthvl apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis
      601 ldphgddgrl nilpyvcld
//
LOCUS       XP_041337592             619 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337592
VERSION     XP_041337592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X1"
                     /calculated_mol_wt=68640
     Region          33..>197
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <38..97
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          189..437
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          439..617
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..619
                     /gene="MED26"
                     /coded_by="XM_041481658.1:1624..3483"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mdtwncvcrr kkdlfslsqc lyfsacfcht alvlqihnmv avlevissle kypitkeale
       61 etrlgrline vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah
      121 nckpdsqlpa vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk
      181 ashevlqnss ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph
      241 tsspglvkps stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt
      301 yspkdsmpsp sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq
      361 gapegqhrht agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr
      421 dytvnldghv ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek
      481 qeqkpnlqsp feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest
      541 rkearkthvl apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis
      601 ldphgddgrl nilpyvcld
//
LOCUS       XP_041337601             619 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337601
VERSION     XP_041337601.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481667.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X1"
                     /calculated_mol_wt=68640
     Region          33..>197
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <38..97
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          189..437
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          439..617
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..619
                     /gene="MED26"
                     /coded_by="XM_041481667.1:2630..4489"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mdtwncvcrr kkdlfslsqc lyfsacfcht alvlqihnmv avlevissle kypitkeale
       61 etrlgrline vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah
      121 nckpdsqlpa vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk
      181 ashevlqnss ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph
      241 tsspglvkps stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt
      301 yspkdsmpsp sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq
      361 gapegqhrht agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr
      421 dytvnldghv ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek
      481 qeqkpnlqsp feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest
      541 rkearkthvl apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis
      601 ldphgddgrl nilpyvcld
//
LOCUS       XP_041337612             619 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337612
VERSION     XP_041337612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X1"
                     /calculated_mol_wt=68640
     Region          33..>197
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <38..97
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          189..437
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          439..617
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..619
                     /gene="MED26"
                     /coded_by="XM_041481678.1:1039..2898"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mdtwncvcrr kkdlfslsqc lyfsacfcht alvlqihnmv avlevissle kypitkeale
       61 etrlgrline vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah
      121 nckpdsqlpa vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk
      181 ashevlqnss ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph
      241 tsspglvkps stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt
      301 yspkdsmpsp sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq
      361 gapegqhrht agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr
      421 dytvnldghv ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek
      481 qeqkpnlqsp feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest
      541 rkearkthvl apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis
      601 ldphgddgrl nilpyvcld
//
LOCUS       XP_041337620             619 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337620
VERSION     XP_041337620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X1"
                     /calculated_mol_wt=68640
     Region          33..>197
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <38..97
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          189..437
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          439..617
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..619
                     /gene="MED26"
                     /coded_by="XM_041481686.1:2013..3872"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mdtwncvcrr kkdlfslsqc lyfsacfcht alvlqihnmv avlevissle kypitkeale
       61 etrlgrline vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah
      121 nckpdsqlpa vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk
      181 ashevlqnss ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph
      241 tsspglvkps stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt
      301 yspkdsmpsp sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq
      361 gapegqhrht agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr
      421 dytvnldghv ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek
      481 qeqkpnlqsp feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest
      541 rkearkthvl apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis
      601 ldphgddgrl nilpyvcld
//
LOCUS       XP_041337628             609 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337628
VERSION     XP_041337628.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481694.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X2"
                     /calculated_mol_wt=67227
     Region          10..86
                     /region_name="TFIIS_I"
                     /note="N-terminal domain (domain I) of transcription
                     elongation factor S-II (TFIIS); similar to a domain found
                     in elongin A and CRSP70; likely to be involved in
                     transcription; domain I from TFIIS interacts with RNA
                     polymerase II holoenzyme; cd00183"
                     /db_xref="CDD:238107"
     Region          15..>187
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Site            order(18..19,22,62..63)
                     /site_type="other"
                     /note="putative RNA polymerase binding site [polypeptide
                     binding]"
                     /db_xref="CDD:238107"
     Region          179..427
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          429..607
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..609
                     /gene="MED26"
                     /coded_by="XM_041481694.1:12..1841"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mtaapapspq qirdrllqai dpqsnihnmv avlevissle kypitkeale etrlgrline
       61 vrkktsneel akrakkllrn wqkliepvtq nepvprglpn ppgsanggah nckpdsqlpa
      121 vpgakpisel ksrndiqkln spkteklgnr krkgdhrdgh qgppppkvsk ashevlqnss
      181 ppptngiggs penfpspvdi nlhagpessr tdlsendkhn kipvnavkph tsspglvkps
      241 stssllktav lqqhdkseea tgphqpkspr cssfsprnvr hdtfarqhtt yspkdsmpsp
      301 sqrsqfadaa pvpspppslm qpstppmpak rlefppqaap eaaqhwqeqq gapegqhrht
      361 agtlqqhtap gckghpgesh mgfpqdtsrm dsddaasgsd skkkkryrpr dytvnldghv
      421 ieggvkpvrl kerkltfdpm tgqikpltpk dplqveipal teqhrtetek qeqkpnlqsp
      481 feqtnwkels rneiiqsyln rqssllsssg vqtpgahyfm seylkqeest rkearkthvl
      541 apnskptdlp gvtrevtgdd ldrirdhnwp gvngcydtqg nwydwtqcis ldphgddgrl
      601 nilpyvcld
//
LOCUS       XP_041337637             581 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337637
VERSION     XP_041337637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X3"
                     /calculated_mol_wt=64162
     Region          <1..59
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          3..>159
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          151..399
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          401..579
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..581
                     /gene="MED26"
                     /coded_by="XM_041481703.1:241..1986"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mvavleviss lekypitkea leetrlgrli nevrkktsne elakrakkll rnwqkliepv
       61 tqnepvprgl pnppgsangg ahnckpdsql pavpgakpis elksrndiqk lnspkteklg
      121 nrkrkgdhrd ghqgppppkv skashevlqn ssppptngig gspenfpspv dinlhagpes
      181 srtdlsendk hnkipvnavk phtsspglvk psstssllkt avlqqhdkse eatgphqpks
      241 prcssfsprn vrhdtfarqh ttyspkdsmp spsqrsqfad aapvpsppps lmqpstppmp
      301 akrlefppqa apeaaqhwqe qqgapegqhr htagtlqqht apgckghpge shmgfpqdts
      361 rmdsddaasg sdskkkkryr prdytvnldg hvieggvkpv rlkerkltfd pmtgqikplt
      421 pkdplqveip alteqhrtet ekqeqkpnlq spfeqtnwke lsrneiiqsy lnrqssllss
      481 sgvqtpgahy fmseylkqee strkearkth vlapnskptd lpgvtrevtg ddldrirdhn
      541 wpgvngcydt qgnwydwtqc isldphgddg rlnilpyvcl d
//
LOCUS       XP_041337645             581 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337645
VERSION     XP_041337645.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481711.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X3"
                     /calculated_mol_wt=64162
     Region          <1..59
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          3..>159
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          151..399
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          401..579
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..581
                     /gene="MED26"
                     /coded_by="XM_041481711.1:696..2441"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mvavleviss lekypitkea leetrlgrli nevrkktsne elakrakkll rnwqkliepv
       61 tqnepvprgl pnppgsangg ahnckpdsql pavpgakpis elksrndiqk lnspkteklg
      121 nrkrkgdhrd ghqgppppkv skashevlqn ssppptngig gspenfpspv dinlhagpes
      181 srtdlsendk hnkipvnavk phtsspglvk psstssllkt avlqqhdkse eatgphqpks
      241 prcssfsprn vrhdtfarqh ttyspkdsmp spsqrsqfad aapvpsppps lmqpstppmp
      301 akrlefppqa apeaaqhwqe qqgapegqhr htagtlqqht apgckghpge shmgfpqdts
      361 rmdsddaasg sdskkkkryr prdytvnldg hvieggvkpv rlkerkltfd pmtgqikplt
      421 pkdplqveip alteqhrtet ekqeqkpnlq spfeqtnwke lsrneiiqsy lnrqssllss
      481 sgvqtpgahy fmseylkqee strkearkth vlapnskptd lpgvtrevtg ddldrirdhn
      541 wpgvngcydt qgnwydwtqc isldphgddg rlnilpyvcl d
//
LOCUS       XP_041337654             581 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337654
VERSION     XP_041337654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X3"
                     /calculated_mol_wt=64162
     Region          <1..59
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          3..>159
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          151..399
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          401..579
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..581
                     /gene="MED26"
                     /coded_by="XM_041481720.1:150..1895"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mvavleviss lekypitkea leetrlgrli nevrkktsne elakrakkll rnwqkliepv
       61 tqnepvprgl pnppgsangg ahnckpdsql pavpgakpis elksrndiqk lnspkteklg
      121 nrkrkgdhrd ghqgppppkv skashevlqn ssppptngig gspenfpspv dinlhagpes
      181 srtdlsendk hnkipvnavk phtsspglvk psstssllkt avlqqhdkse eatgphqpks
      241 prcssfsprn vrhdtfarqh ttyspkdsmp spsqrsqfad aapvpsppps lmqpstppmp
      301 akrlefppqa apeaaqhwqe qqgapegqhr htagtlqqht apgckghpge shmgfpqdts
      361 rmdsddaasg sdskkkkryr prdytvnldg hvieggvkpv rlkerkltfd pmtgqikplt
      421 pkdplqveip alteqhrtet ekqeqkpnlq spfeqtnwke lsrneiiqsy lnrqssllss
      481 sgvqtpgahy fmseylkqee strkearkth vlapnskptd lpgvtrevtg ddldrirdhn
      541 wpgvngcydt qgnwydwtqc isldphgddg rlnilpyvcl d
//
LOCUS       XP_041337664             581 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337664
VERSION     XP_041337664.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481730.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X3"
                     /calculated_mol_wt=64162
     Region          <1..59
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          3..>159
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          151..399
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          401..579
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..581
                     /gene="MED26"
                     /coded_by="XM_041481730.1:227..1972"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mvavleviss lekypitkea leetrlgrli nevrkktsne elakrakkll rnwqkliepv
       61 tqnepvprgl pnppgsangg ahnckpdsql pavpgakpis elksrndiqk lnspkteklg
      121 nrkrkgdhrd ghqgppppkv skashevlqn ssppptngig gspenfpspv dinlhagpes
      181 srtdlsendk hnkipvnavk phtsspglvk psstssllkt avlqqhdkse eatgphqpks
      241 prcssfsprn vrhdtfarqh ttyspkdsmp spsqrsqfad aapvpsppps lmqpstppmp
      301 akrlefppqa apeaaqhwqe qqgapegqhr htagtlqqht apgckghpge shmgfpqdts
      361 rmdsddaasg sdskkkkryr prdytvnldg hvieggvkpv rlkerkltfd pmtgqikplt
      421 pkdplqveip alteqhrtet ekqeqkpnlq spfeqtnwke lsrneiiqsy lnrqssllss
      481 sgvqtpgahy fmseylkqee strkearkth vlapnskptd lpgvtrevtg ddldrirdhn
      541 wpgvngcydt qgnwydwtqc isldphgddg rlnilpyvcl d
//
LOCUS       XP_041337674             581 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337674
VERSION     XP_041337674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X4"
                     /calculated_mol_wt=64400
     Region          22..>159
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          <22..57
                     /region_name="Med26"
                     /note="TFIIS helical bundle-like domain; pfam08711"
                     /db_xref="CDD:462573"
     Region          151..399
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          401..579
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..581
                     /gene="MED26"
                     /coded_by="XM_041481740.1:909..2654"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mafsyvstrl rsegrgerwr kketrlgrli nevrkktsne elakrakkll rnwqkliepv
       61 tqnepvprgl pnppgsangg ahnckpdsql pavpgakpis elksrndiqk lnspkteklg
      121 nrkrkgdhrd ghqgppppkv skashevlqn ssppptngig gspenfpspv dinlhagpes
      181 srtdlsendk hnkipvnavk phtsspglvk psstssllkt avlqqhdkse eatgphqpks
      241 prcssfsprn vrhdtfarqh ttyspkdsmp spsqrsqfad aapvpsppps lmqpstppmp
      301 akrlefppqa apeaaqhwqe qqgapegqhr htagtlqqht apgckghpge shmgfpqdts
      361 rmdsddaasg sdskkkkryr prdytvnldg hvieggvkpv rlkerkltfd pmtgqikplt
      421 pkdplqveip alteqhrtet ekqeqkpnlq spfeqtnwke lsrneiiqsy lnrqssllss
      481 sgvqtpgahy fmseylkqee strkearkth vlapnskptd lpgvtrevtg ddldrirdhn
      541 wpgvngcydt qgnwydwtqc isldphgddg rlnilpyvcl d
//
LOCUS       XP_041337684             581 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 26 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337684
VERSION     XP_041337684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="mediator of RNA polymerase II transcription
                     subunit 26 isoform X3"
                     /calculated_mol_wt=64162
     Region          <1..59
                     /region_name="TFS2N"
                     /note="Domain in the N-terminus of transcription
                     elongation factor S-II (and elsewhere); smart00509"
                     /db_xref="CDD:197766"
     Region          3..>159
                     /region_name="TFSII"
                     /note="transcription elongation factor S-II; TIGR01385"
                     /db_xref="CDD:273592"
     Region          151..399
                     /region_name="Med26_M"
                     /note="Mediator complex subunit 26 middle domain;
                     pfam15694"
                     /db_xref="CDD:464807"
     Region          401..579
                     /region_name="Med26_C"
                     /note="Mediator complex subunit 26 C-terminal; pfam15693"
                     /db_xref="CDD:464806"
     CDS             1..581
                     /gene="MED26"
                     /coded_by="XM_041481750.1:175..1920"
                     /db_xref="GeneID:121361182"
ORIGIN      
        1 mvavleviss lekypitkea leetrlgrli nevrkktsne elakrakkll rnwqkliepv
       61 tqnepvprgl pnppgsangg ahnckpdsql pavpgakpis elksrndiqk lnspkteklg
      121 nrkrkgdhrd ghqgppppkv skashevlqn ssppptngig gspenfpspv dinlhagpes
      181 srtdlsendk hnkipvnavk phtsspglvk psstssllkt avlqqhdkse eatgphqpks
      241 prcssfsprn vrhdtfarqh ttyspkdsmp spsqrsqfad aapvpsppps lmqpstppmp
      301 akrlefppqa apeaaqhwqe qqgapegqhr htagtlqqht apgckghpge shmgfpqdts
      361 rmdsddaasg sdskkkkryr prdytvnldg hvieggvkpv rlkerkltfd pmtgqikplt
      421 pkdplqveip alteqhrtet ekqeqkpnlq spfeqtnwke lsrneiiqsy lnrqssllss
      481 sgvqtpgahy fmseylkqee strkearkth vlapnskptd lpgvtrevtg ddldrirdhn
      541 wpgvngcydt qgnwydwtqc isldphgddg rlnilpyvcl d
//
LOCUS       XP_041337692             562 aa            linear   VRT 06-MAY-2021
DEFINITION  nicalin [Pyrgilauda ruficollis].
ACCESSION   XP_041337692
VERSION     XP_041337692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="nicalin"
                     /calculated_mol_wt=63000
     Region          126..428
                     /region_name="M28_nicalin_like"
                     /note="M28 Zn-Peptidase Nicalin, Nicastrin-like protein;
                     cd03882"
                     /db_xref="CDD:349878"
     CDS             1..562
                     /gene="NCLN"
                     /coded_by="XM_041481758.1:64..1752"
                     /db_xref="GeneID:121361245"
ORIGIN      
        1 mleeagevle svlkasclpl svllfvpavl lllgpppaae aaheftvyrm qqyelggqpy
       61 gtrsavlnte artveadvls rrcvmmrlvd fsyeqyqkal rqsagavvii lprsissvpq
      121 dvvrqfmeie pemlametiv pvyfavedee llsiyeqtra asasqgsasa aevllhtata
      181 ngfqmvtsga qskaindwli psvegrltgl ggedlptvvi vahydsfgva pwlshgadsn
      241 gsgisvllel arlfsrlyty rrthagynll ffasgggkfn yqgtkrwled nldhtdssll
      301 qdnvafvlcl dtlgrgnslh lhvskppkeg tlqhaflrel emvvasqfpe vkfsmvhkki
      361 nlaedmlawe herfairrlp aftishlesh rdslrnsimd rraridtkal trntqiiaea
      421 ltrviynlte kgapadmqif tdqmeiqqeq lesvmdwlss qpraaqlidk dstflntley
      481 ymgrylkdvk qhhvkadkrd pefvfydqlk qvmnayrvkp aifdlllavc iaaylgvayv
      541 avqhfgllyk miqrlslktk qq
//
LOCUS       XP_041337698             562 aa            linear   VRT 06-MAY-2021
DEFINITION  nicalin [Pyrgilauda ruficollis].
ACCESSION   XP_041337698
VERSION     XP_041337698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="nicalin"
                     /calculated_mol_wt=63000
     Region          126..428
                     /region_name="M28_nicalin_like"
                     /note="M28 Zn-Peptidase Nicalin, Nicastrin-like protein;
                     cd03882"
                     /db_xref="CDD:349878"
     CDS             1..562
                     /gene="NCLN"
                     /coded_by="XM_041481764.1:64..1752"
                     /db_xref="GeneID:121361245"
ORIGIN      
        1 mleeagevle svlkasclpl svllfvpavl lllgpppaae aaheftvyrm qqyelggqpy
       61 gtrsavlnte artveadvls rrcvmmrlvd fsyeqyqkal rqsagavvii lprsissvpq
      121 dvvrqfmeie pemlametiv pvyfavedee llsiyeqtra asasqgsasa aevllhtata
      181 ngfqmvtsga qskaindwli psvegrltgl ggedlptvvi vahydsfgva pwlshgadsn
      241 gsgisvllel arlfsrlyty rrthagynll ffasgggkfn yqgtkrwled nldhtdssll
      301 qdnvafvlcl dtlgrgnslh lhvskppkeg tlqhaflrel emvvasqfpe vkfsmvhkki
      361 nlaedmlawe herfairrlp aftishlesh rdslrnsimd rraridtkal trntqiiaea
      421 ltrviynlte kgapadmqif tdqmeiqqeq lesvmdwlss qpraaqlidk dstflntley
      481 ymgrylkdvk qhhvkadkrd pefvfydqlk qvmnayrvkp aifdlllavc iaaylgvayv
      541 avqhfgllyk miqrlslktk qq
//
LOCUS       XP_041337707             562 aa            linear   VRT 06-MAY-2021
DEFINITION  nicalin [Pyrgilauda ruficollis].
ACCESSION   XP_041337707
VERSION     XP_041337707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="nicalin"
                     /calculated_mol_wt=63000
     Region          126..428
                     /region_name="M28_nicalin_like"
                     /note="M28 Zn-Peptidase Nicalin, Nicastrin-like protein;
                     cd03882"
                     /db_xref="CDD:349878"
     CDS             1..562
                     /gene="NCLN"
                     /coded_by="XM_041481773.1:64..1752"
                     /db_xref="GeneID:121361245"
ORIGIN      
        1 mleeagevle svlkasclpl svllfvpavl lllgpppaae aaheftvyrm qqyelggqpy
       61 gtrsavlnte artveadvls rrcvmmrlvd fsyeqyqkal rqsagavvii lprsissvpq
      121 dvvrqfmeie pemlametiv pvyfavedee llsiyeqtra asasqgsasa aevllhtata
      181 ngfqmvtsga qskaindwli psvegrltgl ggedlptvvi vahydsfgva pwlshgadsn
      241 gsgisvllel arlfsrlyty rrthagynll ffasgggkfn yqgtkrwled nldhtdssll
      301 qdnvafvlcl dtlgrgnslh lhvskppkeg tlqhaflrel emvvasqfpe vkfsmvhkki
      361 nlaedmlawe herfairrlp aftishlesh rdslrnsimd rraridtkal trntqiiaea
      421 ltrviynlte kgapadmqif tdqmeiqqeq lesvmdwlss qpraaqlidk dstflntley
      481 ymgrylkdvk qhhvkadkrd pefvfydqlk qvmnayrvkp aifdlllavc iaaylgvayv
      541 avqhfgllyk miqrlslktk qq
//
LOCUS       XP_041337716             494 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041337716
VERSION     XP_041337716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="CUGBP Elav-like family member 5"
                     /calculated_mol_wt=53362
     Region          49..135
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(55,57,59..60,63,82,84,86,95..97,99,129,131)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          141..221
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(143,145,147..148,151,170,172,174,182..184,186,216,
                     218)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          405..483
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..494
                     /gene="CELF5"
                     /coded_by="XM_041481782.1:1..1485"
                     /db_xref="GeneID:121361264"
ORIGIN      
        1 marltegear rqppplppap qpppppprra spmsssggae ppaqpdsmkd ldaiklfvgq
       61 iprnleekdl kplfeqfgki yeltvlkdry tgmhkgcafl tycardsaik aqtalheqkt
      121 lpgmarpiqv kpadsesrgg drklfvgmln kqqseddvlr lfepfgvide ctvlrgpdgn
      181 skgcafvkfs shteaqaaih alhgsqtmpg assslvvkfa dtdkertlrr mqqmvgqlgi
      241 ftpslslpfs pysayaqalm qqqttvlsts hgsylspgva fspchiqqig avslnglpat
      301 piapasglhs ppllgtaamp glvapisngf tgvvpfpngh ptletvytng lvpysaqsps
      361 vaetlhpaft gvqqyaavyp tttitpiaqs ipqqppilqq qqregpegcn lfiyhlpqef
      421 gdnelmqmfl pfgniisskv fmdratnqsk cfgfvsfdnp ssaqtaiqam ngfqigmkrl
      481 kvqlkrpkda nhpy
//
LOCUS       XP_041337728             288 aa            linear   VRT 06-MAY-2021
DEFINITION  hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337728
VERSION     XP_041337728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="hydroxysteroid 11-beta-dehydrogenase 1-like
                     protein isoform X1"
                     /calculated_mol_wt=31432
     Region          31..273
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(40,42..43,45,64..66,118..120,167..169,182,186,
                     214..217)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(142,169,182,186)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..288
                     /gene="HSD11B1L"
                     /coded_by="XM_041481794.1:459..1325"
                     /db_xref="GeneID:121361273"
ORIGIN      
        1 mkpvgkvlca tgvvagliaf fwkddfnpes lsgarvlvtg asagigeqia yhcarfgaei
       61 vltarreavl qkvmekcltl gakkifyipa dmsspsepek vvqfavqklg gldylvlnhi
      121 gtnrfqewag dveytrwlmq vnflsyvala taalptlekn rgvlvvvssl tgkmptpftt
      181 sysatkfale gffsslrhel imqkrdvsvt lcilglidte saleytrgkv hlsacpapea
      241 alaivrggaa raheifyprw lqqlcclwal vpssgnqvlr tfynyssp
//
LOCUS       XP_041337739             288 aa            linear   VRT 06-MAY-2021
DEFINITION  hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337739
VERSION     XP_041337739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="hydroxysteroid 11-beta-dehydrogenase 1-like
                     protein isoform X2"
                     /calculated_mol_wt=31251
     Region          31..273
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(40,42..43,45,64..66,123..125,167..169,182,186,
                     214..217)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(142,169,182,186)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..288
                     /gene="HSD11B1L"
                     /coded_by="XM_041481805.1:588..1454"
                     /db_xref="GeneID:121361273"
ORIGIN      
        1 mkpvgkvlca tgvvagliaf fwkddfnpes lsgarvlvtg asagigeqia yhcarfgaei
       61 vltarreavl qkvmekcltl gakkifyipa dmsspsepek vvqfavqkld lefscritlv
      121 pgfgametks cfldsvffiq vnflsyvala taalptlekn rgvlvvvssl tgkmptpftt
      181 sysatkfale gffsslrhel imqkrdvsvt lcilglidte saleytrgkv hlsacpapea
      241 alaivrggaa raheifyprw lqqlcclwal vpssgnqvlr tfynyssp
//
LOCUS       XP_041337748             221 aa            linear   VRT 06-MAY-2021
DEFINITION  hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041337748
VERSION     XP_041337748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="hydroxysteroid 11-beta-dehydrogenase 1-like
                     protein isoform X3"
                     /calculated_mol_wt=24236
     Region          3..206
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(75,102,115,119)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..221
                     /gene="HSD11B1L"
                     /coded_by="XM_041481814.1:529..1194"
                     /db_xref="GeneID:121361273"
ORIGIN      
        1 mtltqvmekc ltlgakkify ipadmsspse pekvvqfavq kldlefscri tlvpgfgame
       61 tkscfldsvf fiqvnflsyv alataalptl eknrgvlvvv ssltgkmptp fttsysatkf
      121 alegffsslr helimqkrdv svtlcilgli dtesaleytr gkvhlsacpa peaalaivrg
      181 gaaraheify prwlqqlccl walvpssgnq vlrtfynyss p
//
LOCUS       XP_041337759             111 aa            linear   VRT 06-MAY-2021
DEFINITION  MICOS complex subunit MIC13 [Pyrgilauda ruficollis].
ACCESSION   XP_041337759
VERSION     XP_041337759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..111
                     /product="MICOS complex subunit MIC13"
                     /calculated_mol_wt=11845
     Region          25..98
                     /region_name="QIL1"
                     /note="MICOS complex subunit MIC13, QIL1; pfam15884"
                     /db_xref="CDD:464923"
     CDS             1..111
                     /gene="MICOS13"
                     /coded_by="XM_041481825.1:28..363"
                     /db_xref="GeneID:121361284"
ORIGIN      
        1 maarllpavk flvkgglaga avyvaydqgl lgsgiegaea lkkaqetlpp aiqewtdylg
       61 welpstpkid fsfsaswnkg vhtvmsalsv aptraceytv egwkyvkdlv k
//
LOCUS       XP_041337779             818 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium/sodium hyperpolarization-activated cyclic
            nucleotide-gated channel 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041337779
VERSION     XP_041337779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..818
                     /product="potassium/sodium hyperpolarization-activated
                     cyclic nucleotide-gated channel 2"
                     /calculated_mol_wt=90775
     Region          5..47
                     /region_name="Ion_trans_N"
                     /note="Ion transport protein N-terminal; pfam08412"
                     /db_xref="CDD:400630"
     Region          40..>527
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          382..490
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(446..447,456..458)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(478..480,484..486)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          <554..812
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          671..>797
                     /region_name="Med25_SD1"
                     /note="Mediator complex subunit 25 synapsin 1; pfam11235"
                     /db_xref="CDD:463244"
     CDS             1..818
                     /gene="HCN2"
                     /coded_by="XM_041481845.1:207..2663"
                     /db_xref="GeneID:121361296"
ORIGIN      
        1 mqrqfgamlq pgvnkfslrm fgsqkavere qervksagaw iihpysdfrf ywdftmllfm
       61 vgnliiipvg itffkeetta pwivfnvvsd tfflmdlvln frtgiviedn teiildpeki
      121 kkkylktwfv vdfvssipvd yvflivekgi dsevyktara lrivrftkil sllrllrlsr
      181 liryihqwee ifhmtydlas avmriinlig mmlllchwdg clqflvpmlq dfpqncwvsi
      241 ngmvndswse lysfalfksm shmlcigygk qapesmtdiw ltmlsmivga tcyamfigha
      301 taliqsldss rrqyqekykq veqymsfhkl padfrqkihd yyehryqgkm fdedsilgel
      361 neplreeivn fncrklvasm plfanadpnf vtamltklkf evfqpgdyii regtigkkmy
      421 fiqhgvvsil tkgnkemkls dgsyfgeicl ltrgrrtasv radtycrlys lsvdnfnevl
      481 eeypmmrraf etvaidrldr igkknsillh kvqhdlnsgv fnnqeneiiq eivkydremv
      541 qqaelqqhta myspvqpqvt saiatlqqav amsfcpqmas plvgsmalgs prmmrrlqya
      601 qavpspfavs pvllqqsppp qpqppvphan pspsqdpaqp talpastsaf aaaaasppsq
      661 splasrtfay ggapgplgsq lslsqqpaps spqrlaahks tqalhtssls qdsrplsasq
      721 pslphglaag stqsppasar esstsigggp aaaspgpgpp aglraqapsr gapahpaptg
      781 sgltpppalp qdsaaarkds asstpdtdpa ksrlssnl
//
LOCUS       XP_041337792             589 aa            linear   VRT 06-MAY-2021
DEFINITION  ectoderm-neural cortex protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337792
VERSION     XP_041337792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="ectoderm-neural cortex protein 1-like"
                     /calculated_mol_wt=65230
     Region          6..152
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          145..242
                     /region_name="BACK_KLHL25_like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like proteins, KLHL25 and KLHL37; cd18464"
                     /db_xref="CDD:350539"
     Region          322..583
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="LOC121361302"
                     /coded_by="XM_041481858.1:96..1865"
                     /db_xref="GeneID:121361302"
ORIGIN      
        1 msvsshenrk srsssgsmni hlfhkpghad slltqlnllr qqnlftdvvl ragnqsfpch
       61 ravlaacsry fnamfsgglk esrdgevnfr dslhpevlel lldyaysarv lineenaesl
      121 leagdmlqfq dirdasadfl eknlypgncl nmlllsdahc cerllelswr malanftsic
      181 ktedflrlpk dkllelvese elevedetlv yeavigwiry dlprrhevlp ellrsvrlal
      241 lpesylrkqv aceklvtshk lgeeivadav rckmkilqnd glvtgccarp rkvsqallll
      301 ggqtfmcdki ymldrktsei ipradipspr kecsacaigc kvyitggkgs engasrdvwv
      361 ydtlhdewak aapmlvarfg hgsaeldhcl yvvgghtams gafpaspsvs lkqvehydpq
      421 ldkwslvapl regvsnaavv gakmklfvfg gtsanqnklp kvqcfdpcqn rwtvpascpq
      481 pwrytaaavv gshviviggd tefsassayr fhsdtfqwsk fgdvtakcis cravtsgnrl
      541 yvvggycgaq rcktldcydp ssdswssvtt vpysliptaf vstwkylsa
//
LOCUS       XP_041337801             589 aa            linear   VRT 06-MAY-2021
DEFINITION  ectoderm-neural cortex protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337801
VERSION     XP_041337801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="ectoderm-neural cortex protein 1-like"
                     /calculated_mol_wt=65230
     Region          6..152
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          145..242
                     /region_name="BACK_KLHL25_like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like proteins, KLHL25 and KLHL37; cd18464"
                     /db_xref="CDD:350539"
     Region          322..583
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="LOC121361302"
                     /coded_by="XM_041481867.1:87..1856"
                     /db_xref="GeneID:121361302"
ORIGIN      
        1 msvsshenrk srsssgsmni hlfhkpghad slltqlnllr qqnlftdvvl ragnqsfpch
       61 ravlaacsry fnamfsgglk esrdgevnfr dslhpevlel lldyaysarv lineenaesl
      121 leagdmlqfq dirdasadfl eknlypgncl nmlllsdahc cerllelswr malanftsic
      181 ktedflrlpk dkllelvese elevedetlv yeavigwiry dlprrhevlp ellrsvrlal
      241 lpesylrkqv aceklvtshk lgeeivadav rckmkilqnd glvtgccarp rkvsqallll
      301 ggqtfmcdki ymldrktsei ipradipspr kecsacaigc kvyitggkgs engasrdvwv
      361 ydtlhdewak aapmlvarfg hgsaeldhcl yvvgghtams gafpaspsvs lkqvehydpq
      421 ldkwslvapl regvsnaavv gakmklfvfg gtsanqnklp kvqcfdpcqn rwtvpascpq
      481 pwrytaaavv gshviviggd tefsassayr fhsdtfqwsk fgdvtakcis cravtsgnrl
      541 yvvggycgaq rcktldcydp ssdswssvtt vpysliptaf vstwkylsa
//
LOCUS       XP_041337810             589 aa            linear   VRT 06-MAY-2021
DEFINITION  ectoderm-neural cortex protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337810
VERSION     XP_041337810.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481876.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="ectoderm-neural cortex protein 1-like"
                     /calculated_mol_wt=65230
     Region          6..152
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          145..242
                     /region_name="BACK_KLHL25_like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like proteins, KLHL25 and KLHL37; cd18464"
                     /db_xref="CDD:350539"
     Region          322..583
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="LOC121361302"
                     /coded_by="XM_041481876.1:92..1861"
                     /db_xref="GeneID:121361302"
ORIGIN      
        1 msvsshenrk srsssgsmni hlfhkpghad slltqlnllr qqnlftdvvl ragnqsfpch
       61 ravlaacsry fnamfsgglk esrdgevnfr dslhpevlel lldyaysarv lineenaesl
      121 leagdmlqfq dirdasadfl eknlypgncl nmlllsdahc cerllelswr malanftsic
      181 ktedflrlpk dkllelvese elevedetlv yeavigwiry dlprrhevlp ellrsvrlal
      241 lpesylrkqv aceklvtshk lgeeivadav rckmkilqnd glvtgccarp rkvsqallll
      301 ggqtfmcdki ymldrktsei ipradipspr kecsacaigc kvyitggkgs engasrdvwv
      361 ydtlhdewak aapmlvarfg hgsaeldhcl yvvgghtams gafpaspsvs lkqvehydpq
      421 ldkwslvapl regvsnaavv gakmklfvfg gtsanqnklp kvqcfdpcqn rwtvpascpq
      481 pwrytaaavv gshviviggd tefsassayr fhsdtfqwsk fgdvtakcis cravtsgnrl
      541 yvvggycgaq rcktldcydp ssdswssvtt vpysliptaf vstwkylsa
//
LOCUS       XP_041337820             589 aa            linear   VRT 06-MAY-2021
DEFINITION  ectoderm-neural cortex protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337820
VERSION     XP_041337820.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481886.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="ectoderm-neural cortex protein 1-like"
                     /calculated_mol_wt=65230
     Region          6..152
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          145..242
                     /region_name="BACK_KLHL25_like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like proteins, KLHL25 and KLHL37; cd18464"
                     /db_xref="CDD:350539"
     Region          322..583
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="LOC121361302"
                     /coded_by="XM_041481886.1:70..1839"
                     /db_xref="GeneID:121361302"
ORIGIN      
        1 msvsshenrk srsssgsmni hlfhkpghad slltqlnllr qqnlftdvvl ragnqsfpch
       61 ravlaacsry fnamfsgglk esrdgevnfr dslhpevlel lldyaysarv lineenaesl
      121 leagdmlqfq dirdasadfl eknlypgncl nmlllsdahc cerllelswr malanftsic
      181 ktedflrlpk dkllelvese elevedetlv yeavigwiry dlprrhevlp ellrsvrlal
      241 lpesylrkqv aceklvtshk lgeeivadav rckmkilqnd glvtgccarp rkvsqallll
      301 ggqtfmcdki ymldrktsei ipradipspr kecsacaigc kvyitggkgs engasrdvwv
      361 ydtlhdewak aapmlvarfg hgsaeldhcl yvvgghtams gafpaspsvs lkqvehydpq
      421 ldkwslvapl regvsnaavv gakmklfvfg gtsanqnklp kvqcfdpcqn rwtvpascpq
      481 pwrytaaavv gshviviggd tefsassayr fhsdtfqwsk fgdvtakcis cravtsgnrl
      541 yvvggycgaq rcktldcydp ssdswssvtt vpysliptaf vstwkylsa
//
LOCUS       XP_041337829             589 aa            linear   VRT 06-MAY-2021
DEFINITION  ectoderm-neural cortex protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337829
VERSION     XP_041337829.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481895.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="ectoderm-neural cortex protein 1-like"
                     /calculated_mol_wt=65230
     Region          6..152
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          145..242
                     /region_name="BACK_KLHL25_like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like proteins, KLHL25 and KLHL37; cd18464"
                     /db_xref="CDD:350539"
     Region          322..583
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="LOC121361302"
                     /coded_by="XM_041481895.1:35..1804"
                     /db_xref="GeneID:121361302"
ORIGIN      
        1 msvsshenrk srsssgsmni hlfhkpghad slltqlnllr qqnlftdvvl ragnqsfpch
       61 ravlaacsry fnamfsgglk esrdgevnfr dslhpevlel lldyaysarv lineenaesl
      121 leagdmlqfq dirdasadfl eknlypgncl nmlllsdahc cerllelswr malanftsic
      181 ktedflrlpk dkllelvese elevedetlv yeavigwiry dlprrhevlp ellrsvrlal
      241 lpesylrkqv aceklvtshk lgeeivadav rckmkilqnd glvtgccarp rkvsqallll
      301 ggqtfmcdki ymldrktsei ipradipspr kecsacaigc kvyitggkgs engasrdvwv
      361 ydtlhdewak aapmlvarfg hgsaeldhcl yvvgghtams gafpaspsvs lkqvehydpq
      421 ldkwslvapl regvsnaavv gakmklfvfg gtsanqnklp kvqcfdpcqn rwtvpascpq
      481 pwrytaaavv gshviviggd tefsassayr fhsdtfqwsk fgdvtakcis cravtsgnrl
      541 yvvggycgaq rcktldcydp ssdswssvtt vpysliptaf vstwkylsa
//
LOCUS       XP_041337839             589 aa            linear   VRT 06-MAY-2021
DEFINITION  ectoderm-neural cortex protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041337839
VERSION     XP_041337839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="ectoderm-neural cortex protein 1-like"
                     /calculated_mol_wt=65230
     Region          6..152
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          145..242
                     /region_name="BACK_KLHL25_like"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like proteins, KLHL25 and KLHL37; cd18464"
                     /db_xref="CDD:350539"
     Region          322..583
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..573
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="LOC121361302"
                     /coded_by="XM_041481905.1:30..1799"
                     /db_xref="GeneID:121361302"
ORIGIN      
        1 msvsshenrk srsssgsmni hlfhkpghad slltqlnllr qqnlftdvvl ragnqsfpch
       61 ravlaacsry fnamfsgglk esrdgevnfr dslhpevlel lldyaysarv lineenaesl
      121 leagdmlqfq dirdasadfl eknlypgncl nmlllsdahc cerllelswr malanftsic
      181 ktedflrlpk dkllelvese elevedetlv yeavigwiry dlprrhevlp ellrsvrlal
      241 lpesylrkqv aceklvtshk lgeeivadav rckmkilqnd glvtgccarp rkvsqallll
      301 ggqtfmcdki ymldrktsei ipradipspr kecsacaigc kvyitggkgs engasrdvwv
      361 ydtlhdewak aapmlvarfg hgsaeldhcl yvvgghtams gafpaspsvs lkqvehydpq
      421 ldkwslvapl regvsnaavv gakmklfvfg gtsanqnklp kvqcfdpcqn rwtvpascpq
      481 pwrytaaavv gshviviggd tefsassayr fhsdtfqwsk fgdvtakcis cravtsgnrl
      541 yvvggycgaq rcktldcydp ssdswssvtt vpysliptaf vstwkylsa
//
LOCUS       XP_041337851             536 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: small conductance calcium-activated potassium
            channel protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337851
VERSION     XP_041337851.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481917.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="LOW QUALITY PROTEIN: small conductance
                     calcium-activated potassium channel protein 1"
                     /calculated_mol_wt=58410
     Region          12..>65
                     /region_name="PHA03201"
                     /note="uracil DNA glycosylase; Provisional"
                     /db_xref="CDD:165468"
     Region          77..186
                     /region_name="SK_channel"
                     /note="Calcium-activated SK potassium channel; pfam03530"
                     /db_xref="CDD:460958"
     Region          275..354
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          368..>417
                     /region_name="CaMBD"
                     /note="Calmodulin binding domain; pfam02888"
                     /db_xref="CDD:460739"
     Region          <485..525
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..536
                     /gene="KCNN1"
                     /coded_by="XM_041481917.1:385..1995"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121361326"
ORIGIN      
        1 msscrynggv arprgppsaa rtpqpphrdp qpcpsprlqv vvsrpeqtga aepgpgaapp
       61 gqgaaeerrn qnigyklghr ralfekrkrl sdyalifgmf givvmvtete lswgvytkes
      121 sysfalkcli slstlillgl ivmyhareiq lfmvdngadd wriamtserv ffialellvc
      181 aihpipgqyl ftwtarlaft yaasvahadv diilsipmfl rlyligrvml lhsklftdas
      241 srsigalnki nfntrfvmkt lmticpgtvl lvfsisswii aawtvrvcer yhdkqevtsn
      301 flgamwlisi tflsigygdm vphtycgkgv clltgimgag ctalvvavva rkleltkaek
      361 hvhnfmmdtq ltkrvknaaa nvlretwliy khtklvkkid hakvrthqrk flqaihqxaq
      421 sltpapphpi lgspqaqsvm lellselqer haelgqrlga leaqlealra llqalpalla
      481 ralgtatatp tgpatptgpa tptgpatpra ptgprtprdg gdtapcsprr dgsdsa
//
LOCUS       XP_041337864            1099 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-If [Pyrgilauda ruficollis].
ACCESSION   XP_041337864
VERSION     XP_041337864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1099
                     /product="unconventional myosin-If"
                     /calculated_mol_wt=125714
     Region          31..677
                     /region_name="MYSc_Myo1"
                     /note="class I myosin, motor domain; cd01378"
                     /db_xref="CDD:276829"
     Site            order(58..61,66,110..117,157..167,386..391)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276829"
     Site            order(58..61,66)
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276829"
     Site            110..117
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276829"
     Site            157..167
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276829"
     Site            386..391
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276829"
     Site            order(415..426,429..436,438)
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276829"
     Site            609..619
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276829"
     Site            order(621..647,664..677)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276829"
     Region          717..915
                     /region_name="Myosin_TH1"
                     /note="Unconventional myosin tail, actin- and
                     lipid-binding; pfam06017"
                     /db_xref="CDD:461801"
     Region          <890..1002
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1046..1098
                     /region_name="SH3_MyoIe_If_like"
                     /note="Src homology 3 domain of Myosins Ie, If, and
                     similar proteins; cd11827"
                     /db_xref="CDD:212761"
     Site            order(1051,1053,1056,1060,1078..1079,1092,1094..1095)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212761"
     CDS             1..1099
                     /gene="MYO1F"
                     /coded_by="XM_041481930.1:85..3384"
                     /db_xref="GeneID:121361334"
ORIGIN      
        1 mgskerfhwq shnvkqsgvd dmvllskise eaivenlkkr fmddfiftyi gpvlisvnpf
       61 kqmpyftdre ielyqgaaqy enpphiyalt dnmyrnmlid genqcviisg esgagktvaa
      121 kyimgyiskv sgggekvqhv kdiilqsnpl leafgnaktv rnnnssrfgk yfeiqfsrgg
      181 epdggkisnf lleksrvvsq necernfhiy yqliqgasqe qrqnlgimsp dyyfylnqtd
      241 tyqvegtddr sdfhetmnam qvigicgedq qlvlqivagi lhlgnisfre egnyarvena
      301 dslafpayll gvdqerlnek vtsrkmdskw ggrsesitvt lnveqaaytr dalakglyar
      361 vfdflvesin ramqkpyeey svgvldiygf eifqkngfeq fcinfvnekl qqifieltlk
      421 aeqeeyvqeg ikwtqiqyfn nkvvcdlien klnppgimsv lddvcatmha tgegadqtll
      481 qklqaavgth ehfnswssgf vihhyagkvs ydvngfcern rdvlftdlie lmqsseygfi
      541 rmlfpeklds dkkgrpttag skikkqandl vntlmkctph yircikpnet kkprdweesr
      601 vkhqveylgl kenirvrrag fayrrlfhkf lqryailtpe twpswrgder qgvqhllrsv
      661 nmdpdqyqmg kskvfvknpe slflleemre rkfdsfarvi qkawrrhvai rkyeqmreea
      721 asilynfker rrnsinrnfv gdylgmeerp elrqflakre ridfadsvtk ydrrfkpikr
      781 dfiltpkyfy ligrekvkkg pekgqikevl kkkvelqavs gvslstrqdd ffilhendad
      841 nflesifkte lisllckrfe eltrsklpls fkdtlqfrvk kegwggggtr nvtfirgqgd
      901 vaalkaggkt lmvsigdglp rnakptrkga aqgrggsrrp apsrsappap rgacrnggpq
      961 vpredgwaqr dtykkpqkqt rgppatalpa rnaghqpktr ppsehnmdfl nvpdqgvagv
     1021 qrrrsvgqrp pparrpkpqp kvegprcral yqyigqdvde lsfnvgdviv ilmedasgww
     1081 kgqlhgkegl fpgnyvqri
//
LOCUS       XP_041337877             741 aa            linear   VRT 06-MAY-2021
DEFINITION  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337877
VERSION     XP_041337877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481943.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="long-chain-fatty-acid--CoA ligase ACSBG2 isoform
                     X1"
                     /calculated_mol_wt=81890
     Region          128..723
                     /region_name="ACSBG_like"
                     /note="Bubblegum-like very long-chain fatty acid CoA
                     synthetase (VL-FACS); cd05933"
                     /db_xref="CDD:341256"
     Site            order(282,285..290,292..293)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341256"
     Site            order(285,407..408,476..481,554,566,569,581,703)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341256"
     Site            order(285,329..330,378,380..381,384,407..408,476..481,554,
                     566,569,578..581,680)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341256"
     Site            order(329,380..381,384,407,578..580,674,680)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341256"
     CDS             1..741
                     /gene="ACSBG2"
                     /coded_by="XM_041481943.1:268..2493"
                     /db_xref="GeneID:121361339"
ORIGIN      
        1 mrgtvlcesd armalaepvs vaycnsalqg scevagedvl lnssprtaep hnsepgedsk
       61 meryqvnslg pkaafsspgs rvwttrcdge vrlrmeeqgp gseapktvhq lfqesvnkys
      121 dyyalaskkd grwikltykm yydecwkaak sflklglerf hgvgilgfns aewfiadiga
      181 ilaggfavgi yttnspeach yvaencsani ivvenhkqlq kileiehrlp hlkgivqyge
      241 eikekrpnly swrefmelgr dvpdsqlhei iasqkpnqcc tliytsgttg qpkgvmlshd
      301 nltwtavvaa rsimlsdahn rqeevvsylp lshiaaqmcd iwaamalgvq vyfaqpdalk
      361 gslvetlrev rptaflgvpr vwekmeekmk svgmkasalr rrvavwakgv glqtnlkrmn
      421 gcseepvnfr larqlvyrkv rkaigldrct kcytgaapit retlefflsl nilvlelygm
      481 sessgphtvs lphafrlgsc gkelagchtl ihqpdkdgig eicfsgrhif mgylnmedkt
      541 keaidedgwl hsgdlgkhdk dgflfitgri keliitagge nippipieda vksavpiisn
      601 amlvgdkakf lsmlltlkcv vnaetgepgd dlspealefc qklgskatkv seiisskdka
      661 iytaiqkgis avnegavsna qkvqkwtlle kdfsifggel gptmklkrpv vvqkyrdqia
      721 rfymdtdipl gepstrpqsl h
//
LOCUS       XP_041337886             740 aa            linear   VRT 06-MAY-2021
DEFINITION  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337886
VERSION     XP_041337886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..740
                     /product="long-chain-fatty-acid--CoA ligase ACSBG2 isoform
                     X2"
                     /calculated_mol_wt=81819
     Region          127..722
                     /region_name="ACSBG_like"
                     /note="Bubblegum-like very long-chain fatty acid CoA
                     synthetase (VL-FACS); cd05933"
                     /db_xref="CDD:341256"
     Site            order(281,284..289,291..292)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341256"
     Site            order(284,406..407,475..480,553,565,568,580,702)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341256"
     Site            order(284,328..329,377,379..380,383,406..407,475..480,553,
                     565,568,577..580,679)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341256"
     Site            order(328,379..380,383,406,577..579,673,679)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341256"
     CDS             1..740
                     /gene="ACSBG2"
                     /coded_by="XM_041481952.1:267..2489"
                     /db_xref="GeneID:121361339"
ORIGIN      
        1 mrgtvlcesd armalaepvs vaycnsalqg scevagedvl lnssprtaep hnsepgedsk
       61 meryqvnslg pkafsspgsr vwttrcdgev rlrmeeqgpg seapktvhql fqesvnkysd
      121 yyalaskkdg rwikltykmy ydecwkaaks flklglerfh gvgilgfnsa ewfiadigai
      181 laggfavgiy ttnspeachy vaencsanii vvenhkqlqk ileiehrlph lkgivqygee
      241 ikekrpnlys wrefmelgrd vpdsqlheii asqkpnqcct liytsgttgq pkgvmlshdn
      301 ltwtavvaar simlsdahnr qeevvsylpl shiaaqmcdi waamalgvqv yfaqpdalkg
      361 slvetlrevr ptaflgvprv wekmeekmks vgmkasalrr rvavwakgvg lqtnlkrmng
      421 cseepvnfrl arqlvyrkvr kaigldrctk cytgaapitr etlefflsln ilvlelygms
      481 essgphtvsl phafrlgscg kelagchtli hqpdkdgige icfsgrhifm gylnmedktk
      541 eaidedgwlh sgdlgkhdkd gflfitgrik eliitaggen ippipiedav ksavpiisna
      601 mlvgdkakfl smlltlkcvv naetgepgdd lspealefcq klgskatkvs eiisskdkai
      661 ytaiqkgisa vnegavsnaq kvqkwtllek dfsifggelg ptmklkrpvv vqkyrdqiar
      721 fymdtdiplg epstrpqslh
//
LOCUS       XP_041337896             729 aa            linear   VRT 06-MAY-2021
DEFINITION  long-chain-fatty-acid--CoA ligase ACSBG2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337896
VERSION     XP_041337896.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481962.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..729
                     /product="long-chain-fatty-acid--CoA ligase ACSBG2 isoform
                     X3"
                     /calculated_mol_wt=80571
     Region          116..711
                     /region_name="ACSBG_like"
                     /note="Bubblegum-like very long-chain fatty acid CoA
                     synthetase (VL-FACS); cd05933"
                     /db_xref="CDD:341256"
     Site            order(270,273..278,280..281)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341256"
     Site            order(273,395..396,464..469,542,554,557,569,691)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341256"
     Site            order(273,317..318,366,368..369,372,395..396,464..469,542,
                     554,557,566..569,668)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341256"
     Site            order(317,368..369,372,395,566..568,662,668)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341256"
     CDS             1..729
                     /gene="ACSBG2"
                     /coded_by="XM_041481962.1:125..2314"
                     /db_xref="GeneID:121361339"
ORIGIN      
        1 malaepvsva ycnsalqgsc evagedvlln ssprtaephn sepgedskme ryqvnslgpk
       61 aafsspgsrv wttrcdgevr lrmeeqgpgs eapktvhqlf qesvnkysdy yalaskkdgr
      121 wikltykmyy decwkaaksf lklglerfhg vgilgfnsae wfiadigail aggfavgiyt
      181 tnspeachyv aencsaniiv venhkqlqki leiehrlphl kgivqygeei kekrpnlysw
      241 refmelgrdv pdsqlheiia sqkpnqcctl iytsgttgqp kgvmlshdnl twtavvaars
      301 imlsdahnrq eevvsylpls hiaaqmcdiw aamalgvqvy faqpdalkgs lvetlrevrp
      361 taflgvprvw ekmeekmksv gmkasalrrr vavwakgvgl qtnlkrmngc seepvnfrla
      421 rqlvyrkvrk aigldrctkc ytgaapitre tlefflslni lvlelygmse ssgphtvslp
      481 hafrlgscgk elagchtlih qpdkdgigei cfsgrhifmg ylnmedktke aidedgwlhs
      541 gdlgkhdkdg flfitgrike liitaggeni ppipiedavk savpiisnam lvgdkakfls
      601 mlltlkcvvn aetgepgddl spealefcqk lgskatkvse iisskdkaiy taiqkgisav
      661 negavsnaqk vqkwtllekd fsifggelgp tmklkrpvvv qkyrdqiarf ymdtdiplge
      721 pstrpqslh
//
LOCUS       XP_041337909             727 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3-kinase regulatory subunit beta [Pyrgilauda
            ruficollis].
ACCESSION   XP_041337909
VERSION     XP_041337909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..727
                     /product="phosphatidylinositol 3-kinase regulatory subunit
                     beta"
                     /calculated_mol_wt=82762
     Region          7..80
                     /region_name="SH3_PI3K_p85beta"
                     /note="Src Homology 3 domain of the p85beta regulatory
                     subunit of Class IA Phosphatidylinositol 3-kinases;
                     cd11909"
                     /db_xref="CDD:212842"
     Site            order(13..15,19,22,54..56,71,73..74)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212842"
     Region          117..302
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cl02570"
                     /db_xref="CDD:470621"
     Site            order(153,185,189,261,264..265,286)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            153
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     Region          329..436
                     /region_name="SH2_nSH2_p85_like"
                     /note="N-terminal Src homology 2 (nSH2) domain found in
                     p85; cd09942"
                     /db_xref="CDD:198195"
     Site            order(341,359,381,383)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198195"
     Site            order(382,409)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198195"
     Region          441..601
                     /region_name="iSH2_PIK3R2"
                     /note="Inter-Src homology 2 (iSH2) helical domain of Class
                     IA Phosphoinositide 3-kinase Regulatory subunit 2, PIK3R2,
                     also called p85beta; cd12926"
                     /db_xref="CDD:214019"
     Site            order(462,464..465,469,471,476,478..479,482..484,486..488,
                     490..491,494..495,497..498,501..502,505..506,521,524..525,
                     528,531..532,535,539,551,554..555,558,561..562,564..565,
                     568..569,575)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:214019"
     Site            order(572,575..576,578..580,582..584,586..588,591..592,
                     595)
                     /site_type="other"
                     /note="NS1 interaction site [polypeptide binding]"
                     /db_xref="CDD:214019"
     Region          619..721
                     /region_name="SH2_cSH2_p85_like"
                     /note="C-terminal Src homology 2 (cSH2) domain found in
                     p85; cd09930"
                     /db_xref="CDD:198184"
     Site            order(633,651,653..654,671,673)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198184"
     Site            order(672,683,705,708,712)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198184"
     CDS             1..727
                     /gene="PIK3R2"
                     /coded_by="XM_041481975.1:544..2727"
                     /db_xref="GeneID:121361353"
ORIGIN      
        1 mgstdgfqyr alypyrkere edidllpgdi lvvskgalqa lgfkdgdeqt pnqigwilgv
       61 nertkqkgdf pgtyveyvgp vkiavpshrp rvqrplpatp gasgcrlpea leqgsplpdl
      121 qeqfsppeia ppllvklvea iekkgldsem lyrtsgselr qalrtdwtlg dlepldvhsl
      181 gealrgylqd lpspvvpvsv hgdilrilqe ipqpencrkq lllalespav plqntltlqf
      241 llrhlgkvsq qaesnslhpr algeifgpll lrlpgaspel spdfsvlfle tllqtkelep
      301 eqlppalppk ppkpkpsaas langnnaplq daewywgdis reevneklrd tpdgtflvrd
      361 asskiqgeyt ltlrkggnnk likifhregk ygfsepltfg svvelithyr heslaqynak
      421 ldtrllypis kyqqdqvvke dsveavgeql kvyhqqyqdk sweydllyee ytrtsqelqm
      481 krtaieafne tikifeeqcq tqekcskeyi erfrregnek evqrilmnse klksriteih
      541 dskmkleqdl kkqasenrei dkrmnslkpd lmqlrklrdq ylvwltqkga rqkkinewlg
      601 iknetedqys mmddeeelph heertwyvgk inrvqaeeml cgkrdgtfli ressqkgcya
      661 csvvvdgdtk hcviyktatg ygfaepynly aslkdlvlhy khtslvqhnd slnvtlahpv
      721 lsqppar
//
LOCUS       XP_041337927             725 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041337927
VERSION     XP_041337927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041481993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..725
                     /product="DNA-binding protein RFX2 isoform X1"
                     /calculated_mol_wt=80191
     Region          4..163
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          209..283
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..725
                     /gene="RFX2"
                     /coded_by="XM_041481993.1:45..2222"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqvttat ssptaipshn mvgitmdigg sqilsgsgay lihgglensr hslshtsrss
      181 patlemaien lqknegitsh kssllnshlq wlldnyetae gvslprssly nhylrhcqeh
      241 kldpvnaasf gklirsvfmg lrtrrlgtrg nskyhyygir lkpesplnrl qedtqymamr
      301 qqpihqkqry raaqkmdgma esasnstpht tpeqsvaaqc qhhqqfidvt hvfpefpapd
      361 lgnvllqegf tlndvktlqv lyrrhceatl dvvmhlqfhy ieklwqsfws pkaapsdgpt
      421 alpsseeeae gtlpkdklit lckyepilkw mrscdhilyq alveilipdv lrpvpstltq
      481 airnfaksle gwlmnamsef ppqvvqtkvg vvsafaqtlr rytslnhlaq aaravlqnts
      541 qinqmlsdln rvdfanvqqe qaswvcqcee gmvqkleqdf kltlqqqssl dqwaswldnv
      601 vtqvlkhheg spsfpkaarq fllkwsfyss mvirdltlrs aasfgsfhli rllydeymfy
      661 lvehrvaqat getpiavmge fgdltslspt lldkddisel gtegdpgepl vkrersepgh
      721 slqdi
//
LOCUS       XP_041337936             725 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041337936
VERSION     XP_041337936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..725
                     /product="DNA-binding protein RFX2 isoform X2"
                     /calculated_mol_wt=80191
     Region          4..163
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          209..283
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..725
                     /gene="RFX2"
                     /coded_by="XM_041482002.1:46..2223"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqvttat ssptaipshn mvgitmdigg sqilsgsgay lihgglensr hslshtsrss
      181 patlemaien lqknegitsh kssllnshlq wlldnyetae gvslprssly nhylrhcqeh
      241 kldpvnaasf gklirsvfmg lrtrrlgtrg nskyhyygir lkpesplnrl qedtqymamr
      301 qqpihqkqry raaqkmdgma esasnstpht tpeqsvaaqc qhhqqfidvt hvfpefpapd
      361 lgnvllqegf tlndvktlqv lyrrhceatl dvvmhlqfhy ieklwqsfws pkaapsdgpt
      421 alpsseeeae gtlpkdklit lckyepilkw mrscdhilyq alveilipdv lrpvpstltq
      481 airnfaksle gwlmnamsef ppqvvqtkvg vvsafaqtlr rytslnhlaq aaravlqnts
      541 qinqmlsdln rvdfanvqqe qaswvcqcee gmvqkleqdf kltlqqqssl dqwaswldnv
      601 vtqvlkhheg spsfpkaarq fllkwsfyss mvirdltlrs aasfgsfhli rllydeymfy
      661 lvehrvaqat getpiavmge fgdltslspt lldkddisel gtegdpgepl vkrersepgh
      721 slqdi
//
LOCUS       XP_041337945             723 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041337945
VERSION     XP_041337945.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482011.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..723
                     /product="DNA-binding protein RFX2 isoform X3"
                     /calculated_mol_wt=79950
     Region          4..163
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          208..281
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..723
                     /gene="RFX2"
                     /coded_by="XM_041482011.1:43..2214"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqvttat ssptaipshn mvgitmdigg sqilsgsgay lihgglensr hslshtsrss
      181 patlemaien lqknegitsh kssllnshwl ldnyetaegv slprsslynh ylrhcqehkl
      241 dpvnaasfgk lirsvfmglr trrlgtrgns kyhyygirlk pesplnrlqe dtqymamrqq
      301 pihqkqryra aqkmdgmaes asnstphttp eqsvaaqcqh hqqfidvthv fpefpapdlg
      361 nvllqegftl ndvktlqvly rrhceatldv vmhlqfhyie klwqsfwspk aapsdgptal
      421 psseeeaegt lpkdklitlc kyepilkwmr scdhilyqal veilipdvlr pvpstltqai
      481 rnfakslegw lmnamsefpp qvvqtkvgvv safaqtlrry tslnhlaqaa ravlqntsqi
      541 nqmlsdlnrv dfanvqqeqa swvcqceegm vqkleqdfkl tlqqqssldq waswldnvvt
      601 qvlkhhegsp sfpkaarqfl lkwsfyssmv irdltlrsaa sfgsfhlirl lydeymfylv
      661 ehrvaqatge tpiavmgefg dltslsptll dkddiselgt egdpgeplvk rersepghsl
      721 qdi
//
LOCUS       XP_041337954             700 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041337954
VERSION     XP_041337954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482020.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..700
                     /product="DNA-binding protein RFX2 isoform X4"
                     /calculated_mol_wt=77415
     Region          4..163
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          181..258
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..700
                     /gene="RFX2"
                     /coded_by="XM_041482020.1:36..2138"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqvttat ssptaipshn mvgitmdigg sqilsgsgay lihgglensr hslshtsrss
      181 patlqwlldn yetaegvslp rsslynhylr hcqehkldpv naasfgklir svfmglrtrr
      241 lgtrgnskyh yygirlkpes plnrlqedtq ymamrqqpih qkqryraaqk mdgmaesasn
      301 stphttpeqs vaaqcqhhqq fidvthvfpe fpapdlgnvl lqegftlndv ktlqvlyrrh
      361 ceatldvvmh lqfhyieklw qsfwspkaap sdgptalpss eeeaegtlpk dklitlckye
      421 pilkwmrscd hilyqalvei lipdvlrpvp stltqairnf akslegwlmn amsefppqvv
      481 qtkvgvvsaf aqtlrrytsl nhlaqaarav lqntsqinqm lsdlnrvdfa nvqqeqaswv
      541 cqceegmvqk leqdfkltlq qqssldqwas wldnvvtqvl khhegspsfp kaarqfllkw
      601 sfyssmvird ltlrsaasfg sfhlirllyd eymfylvehr vaqatgetpi avmgefgdlt
      661 slsptlldkd diselgtegd pgeplvkrer sepghslqdi
//
LOCUS       XP_041337961             699 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041337961
VERSION     XP_041337961.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482027.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..699
                     /product="DNA-binding protein RFX2 isoform X5"
                     /calculated_mol_wt=77287
     Region          4..163
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          181..258
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..699
                     /gene="RFX2"
                     /coded_by="XM_041482027.1:31..2130"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqvttat ssptaipshn mvgitmdigg sqilsgsgay lihgglensr hslshtsrss
      181 patlqwlldn yetaegvslp rsslynhylr hcqehkldpv naasfgklir svfmglrtrr
      241 lgtrgnskyh yygirlkpes plnrlqedtq ymamrqqpih qkqryraaqk mdgmaesasn
      301 stphttpeqs vaaqcqhhqq fidvthvfpe fpapdlgnvl lqegftlndv ktlqvlyrrh
      361 ceatldvvmh lqfhyieklw qsfwspkaap sdgptalpss eeeaegtlpk dklitlckye
      421 pilkwmrscd hilyqalvei lipdvlrpvp stltqairnf akslegwlmn amsefppqvv
      481 qtkvgvvsaf aqtlrrytsl nhlaqaarav lqntsqinqm lsdlnrvdfa nvqeqaswvc
      541 qceegmvqkl eqdfkltlqq qssldqwasw ldnvvtqvlk hhegspsfpk aarqfllkws
      601 fyssmvirdl tlrsaasfgs fhlirllyde ymfylvehrv aqatgetpia vmgefgdlts
      661 lsptlldkdd iselgtegdp geplvkrers epghslqdi
//
LOCUS       XP_041337971             667 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041337971
VERSION     XP_041337971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..667
                     /product="DNA-binding protein RFX2 isoform X6"
                     /calculated_mol_wt=74359
     Region          4..>117
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          151..225
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..667
                     /gene="RFX2"
                     /coded_by="XM_041482037.1:36..2039"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqlemai enlqknegit shkssllnsh lqwlldnyet aegvslprss lynhylrhcq
      181 ehkldpvnaa sfgklirsvf mglrtrrlgt rgnskyhyyg irlkpespln rlqedtqyma
      241 mrqqpihqkq ryraaqkmdg maesasnstp httpeqsvaa qcqhhqqfid vthvfpefpa
      301 pdlgnvllqe gftlndvktl qvlyrrhcea tldvvmhlqf hyieklwqsf wspkaapsdg
      361 ptalpsseee aegtlpkdkl itlckyepil kwmrscdhil yqalveilip dvlrpvpstl
      421 tqairnfaks legwlmnams efppqvvqtk vgvvsafaqt lrrytslnhl aqaaravlqn
      481 tsqinqmlsd lnrvdfanvq qeqaswvcqc eegmvqkleq dfkltlqqqs sldqwaswld
      541 nvvtqvlkhh egspsfpkaa rqfllkwsfy ssmvirdltl rsaasfgsfh lirllydeym
      601 fylvehrvaq atgetpiavm gefgdltsls ptlldkddis elgtegdpge plvkrersep
      661 ghslqdi
//
LOCUS       XP_041337980             665 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041337980
VERSION     XP_041337980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..665
                     /product="DNA-binding protein RFX2 isoform X7"
                     /calculated_mol_wt=74118
     Region          4..>117
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          150..223
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..665
                     /gene="RFX2"
                     /coded_by="XM_041482046.1:39..2036"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqlemai enlqknegit shkssllnsh wlldnyetae gvslprssly nhylrhcqeh
      181 kldpvnaasf gklirsvfmg lrtrrlgtrg nskyhyygir lkpesplnrl qedtqymamr
      241 qqpihqkqry raaqkmdgma esasnstpht tpeqsvaaqc qhhqqfidvt hvfpefpapd
      301 lgnvllqegf tlndvktlqv lyrrhceatl dvvmhlqfhy ieklwqsfws pkaapsdgpt
      361 alpsseeeae gtlpkdklit lckyepilkw mrscdhilyq alveilipdv lrpvpstltq
      421 airnfaksle gwlmnamsef ppqvvqtkvg vvsafaqtlr rytslnhlaq aaravlqnts
      481 qinqmlsdln rvdfanvqqe qaswvcqcee gmvqkleqdf kltlqqqssl dqwaswldnv
      541 vtqvlkhheg spsfpkaarq fllkwsfyss mvirdltlrs aasfgsfhli rllydeymfy
      601 lvehrvaqat getpiavmge fgdltslspt lldkddisel gtegdpgepl vkrersepgh
      661 slqdi
//
LOCUS       XP_041337988             642 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041337988
VERSION     XP_041337988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482054.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="DNA-binding protein RFX2 isoform X8"
                     /calculated_mol_wt=71583
     Region          4..>117
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          126..200
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..642
                     /gene="RFX2"
                     /coded_by="XM_041482054.1:34..1962"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqlqwll dnyetaegvs lprsslynhy lrhcqehkld pvnaasfgkl irsvfmglrt
      181 rrlgtrgnsk yhyygirlkp esplnrlqed tqymamrqqp ihqkqryraa qkmdgmaesa
      241 snstphttpe qsvaaqcqhh qqfidvthvf pefpapdlgn vllqegftln dvktlqvlyr
      301 rhceatldvv mhlqfhyiek lwqsfwspka apsdgptalp sseeeaegtl pkdklitlck
      361 yepilkwmrs cdhilyqalv eilipdvlrp vpstltqair nfakslegwl mnamsefppq
      421 vvqtkvgvvs afaqtlrryt slnhlaqaar avlqntsqin qmlsdlnrvd fanvqqeqas
      481 wvcqceegmv qkleqdfklt lqqqssldqw aswldnvvtq vlkhhegsps fpkaarqfll
      541 kwsfyssmvi rdltlrsaas fgsfhlirll ydeymfylve hrvaqatget piavmgefgd
      601 ltslsptlld kddiselgte gdpgeplvkr ersepghslq di
//
LOCUS       XP_041337996             724 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX2 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041337996
VERSION     XP_041337996.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482062.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..724
                     /product="DNA-binding protein RFX2 isoform X9"
                     /calculated_mol_wt=80063
     Region          4..163
                     /region_name="RFX1_trans_act"
                     /note="RFX1 transcription activation region; pfam04589"
                     /db_xref="CDD:461362"
     Region          209..283
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..724
                     /gene="RFX2"
                     /coded_by="XM_041482062.1:78..2252"
                     /db_xref="GeneID:121361361"
ORIGIN      
        1 mqspeggsds aasvalhpsa saqapvvqpv pasqqrvlvq atgsapkgaq mqqisvprvq
       61 qvpqqvqsvq hvypaqvqyv eggeavytng tiraaysyss eaqiyapasa apyfeaqggg
      121 gggaqvttat ssptaipshn mvgitmdigg sqilsgsgay lihgglensr hslshtsrss
      181 patlemaien lqknegitsh kssllnshlq wlldnyetae gvslprssly nhylrhcqeh
      241 kldpvnaasf gklirsvfmg lrtrrlgtrg nskyhyygir lkpesplnrl qedtqymamr
      301 qqpihqkqry raaqkmdgma esasnstpht tpeqsvaaqc qhhqqfidvt hvfpefpapd
      361 lgnvllqegf tlndvktlqv lyrrhceatl dvvmhlqfhy ieklwqsfws pkaapsdgpt
      421 alpsseeeae gtlpkdklit lckyepilkw mrscdhilyq alveilipdv lrpvpstltq
      481 airnfaksle gwlmnamsef ppqvvqtkvg vvsafaqtlr rytslnhlaq aaravlqnts
      541 qinqmlsdln rvdfanvqeq aswvcqceeg mvqkleqdfk ltlqqqssld qwaswldnvv
      601 tqvlkhhegs psfpkaarqf llkwsfyssm virdltlrsa asfgsfhlir llydeymfyl
      661 vehrvaqatg etpiavmgef gdltslsptl ldkddiselg tegdpgeplv krersepghs
      721 lqdi
//
LOCUS       XP_041338010             605 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase ZAP-70 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338010
VERSION     XP_041338010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..605
                     /product="tyrosine-protein kinase ZAP-70 isoform X1"
                     /calculated_mol_wt=68522
     Region          8..111
                     /region_name="SH2_N-SH2_Zap70_Syk_like"
                     /note="N-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70) and
                     Spleen tyrosine kinase (Syk) proteins; cd09938"
                     /db_xref="CDD:198191"
     Site            order(17,37,58,60)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198191"
     Site            order(59,71..72,74,93..94)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198191"
     Region          152..256
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(170,190,210,212)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(211,238)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          319..587
                     /region_name="PTKc_Zap-70"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Zeta-chain-associated protein of 70kDa; cd05115"
                     /db_xref="CDD:270686"
     Site            order(330..335,338,353,355,400..404,406..407,447,451..452,
                     454,464..465,484..488,497,531)
                     /site_type="active"
                     /db_xref="CDD:270686"
     Site            order(330..335,338,353,355,400..404,406..407,451..452,454,
                     464..465)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270686"
     Site            order(348,380..383,386,388,401,426,429..430,433,457,
                     459..460,580,583..584,587)
                     /site_type="other"
                     /note="SH2 linker interface [polypeptide binding]"
                     /db_xref="CDD:270686"
     Site            order(447,451,484..488,497,531)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270686"
     Site            464..490
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270686"
     CDS             1..605
                     /gene="LOC121361404"
                     /coded_by="XM_041482076.1:1..1818"
                     /db_xref="GeneID:121361404"
ORIGIN      
        1 mpdaaahlpf yygsiaraea eehlklagma dglfllrqcl rslggyvlsm vcdlqfyhyp
       61 ierqlngtya ilggkahcgp eelcefyskd adglccplrk pcnrpsgvep qpgvfdsmrd
      121 nmvreyvrqt wklegdaleq aiisqapqve klvattaher mpwyhgnisr eeaerrlysg
      181 aqpdgkfllr ekkenrayal slvygktvyh yrvdhdksgk ysipegtkfd tlwqlveylk
      241 lkpdglifyl reacpnscfa asaapappth psrnlgplna dgytpdpvgk srllpmdtsv
      301 yespysdpee lkdkklflkr dhlmidevel gagnfgcvkk gvykmrkkqi dvaikvlksn
      361 nektvkdemm keaqimhqld npyivrmigv ceaeslmlvm emasggplnr flaskkdeit
      421 tsnivelmhq vsmgmkylee knfvhrdlaa rnvllvnqhy akisdfglsk algaddsyyk
      481 artagkwplk wyapecilfh kfssksdvws ygvtmweafs fgqkpykkmk gpevtsfieq
      541 gkrmdcpqec paemyslmqq cwtyrweerp gfvaventir syyysiaakp angpdagdrp
      601 kaalp
//
LOCUS       XP_041338019             602 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase ZAP-70 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338019
VERSION     XP_041338019.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482085.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..602
                     /product="tyrosine-protein kinase ZAP-70 isoform X2"
                     /calculated_mol_wt=68324
     Region          8..111
                     /region_name="SH2_N-SH2_Zap70_Syk_like"
                     /note="N-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70) and
                     Spleen tyrosine kinase (Syk) proteins; cd09938"
                     /db_xref="CDD:198191"
     Site            order(17,37,58,60)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198191"
     Site            order(59,71..72,74,93..94)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198191"
     Region          152..254
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(170,190,210,212)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(211,238)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          316..584
                     /region_name="PTKc_Zap-70"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Zeta-chain-associated protein of 70kDa; cd05115"
                     /db_xref="CDD:270686"
     Site            order(327..332,335,350,352,397..401,403..404,444,448..449,
                     451,461..462,481..485,494,528)
                     /site_type="active"
                     /db_xref="CDD:270686"
     Site            order(327..332,335,350,352,397..401,403..404,448..449,451,
                     461..462)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270686"
     Site            order(345,377..380,383,385,398,423,426..427,430,454,
                     456..457,577,580..581,584)
                     /site_type="other"
                     /note="SH2 linker interface [polypeptide binding]"
                     /db_xref="CDD:270686"
     Site            order(444,448,481..485,494,528)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270686"
     Site            461..487
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270686"
     CDS             1..602
                     /gene="LOC121361404"
                     /coded_by="XM_041482085.1:1..1809"
                     /db_xref="GeneID:121361404"
ORIGIN      
        1 mpdaaahlpf yygsiaraea eehlklagma dglfllrqcl rslggyvlsm vcdlqfyhyp
       61 ierqlngtya ilggkahcgp eelcefyskd adglccplrk pcnrpsgvep qpgvfdsmrd
      121 nmvreyvrqt wklegdaleq aiisqapqve klvattaher mpwyhgnisr eeaerrlysg
      181 aqpdgkfllr ekkenrayal slvygktvyh yrvdhdksgk ysipegtkfd tlwqlveylk
      241 lkpdglifyl reacpnpnmp apappthpsr nlgplnadgy tpdpvgksrl lpmdtsvyes
      301 pysdpeelkd kklflkrdhl midevelgag nfgcvkkgvy kmrkkqidva ikvlksnnek
      361 tvkdemmkea qimhqldnpy ivrmigvcea eslmlvmema sggplnrfla skkdeittsn
      421 ivelmhqvsm gmkyleeknf vhrdlaarnv llvnqhyaki sdfglskalg addsyykart
      481 agkwplkwya pecilfhkfs sksdvwsygv tmweafsfgq kpykkmkgpe vtsfieqgkr
      541 mdcpqecpae myslmqqcwt yrweerpgfv aventirsyy ysiaakpang pdagdrpkaa
      601 lp
//
LOCUS       XP_041338028             609 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase ZAP-70 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041338028
VERSION     XP_041338028.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482094.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="tyrosine-protein kinase ZAP-70 isoform X3"
                     /calculated_mol_wt=68867
     Region          8..111
                     /region_name="SH2_N-SH2_Zap70_Syk_like"
                     /note="N-terminal Src homology 2 (SH2) domain found in
                     Zeta-chain-associated protein kinase 70 (ZAP-70) and
                     Spleen tyrosine kinase (Syk) proteins; cd09938"
                     /db_xref="CDD:198191"
     Site            order(17,37,58,60)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198191"
     Site            order(59,71..72,74,93..94)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198191"
     Region          152..256
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(170,190,210,212)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(211,238)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     Region          323..591
                     /region_name="PTKc_Zap-70"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Zeta-chain-associated protein of 70kDa; cd05115"
                     /db_xref="CDD:270686"
     Site            order(334..339,342,357,359,404..408,410..411,451,455..456,
                     458,468..469,488..492,501,535)
                     /site_type="active"
                     /db_xref="CDD:270686"
     Site            order(334..339,342,357,359,404..408,410..411,455..456,458,
                     468..469)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270686"
     Site            order(352,384..387,390,392,405,430,433..434,437,461,
                     463..464,584,587..588,591)
                     /site_type="other"
                     /note="SH2 linker interface [polypeptide binding]"
                     /db_xref="CDD:270686"
     Site            order(451,455,488..492,501,535)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270686"
     Site            468..494
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270686"
     CDS             1..609
                     /gene="LOC121361404"
                     /coded_by="XM_041482094.1:10..1839"
                     /db_xref="GeneID:121361404"
ORIGIN      
        1 mpdaaahlpf yygsiaraea eehlklagma dglfllrqcl rslggyvlsm vcdlqfyhyp
       61 ierqlngtya ilggkahcgp eelcefyskd adglccplrk pcnrpsgvep qpgvfdsmrd
      121 nmvreyvrqt wklegdaleq aiisqapqve klvattaher mpwyhgnisr eeaerrlysg
      181 aqpdgkfllr ekkenrayal slvygktvyh yrvdhdksgk ysipegtkfd tlwqlveylk
      241 lkpdglifyl reacpnpnmp asaapappth psvsrnlgpl nadgytpdpv gagksrllpm
      301 dtsvyespys dpeelkdkkl flkrdhlmid evelgagnfg cvkkgvykmr kkqidvaikv
      361 lksnnektvk demmkeaqim hqldnpyivr migvceaesl mlvmemasgg plnrflaskk
      421 deittsnive lmhqvsmgmk yleeknfvhr dlaarnvllv nqhyakisdf glskalgadd
      481 syykartagk wplkwyapec ilfhkfssks dvwsygvtmw eafsfgqkpy kkmkgpevts
      541 fieqgkrmdc pqecpaemys lmqqcwtyrw eerpgfvave ntirsyyysi aakpangpda
      601 gdrpkaalp
//
LOCUS       XP_041338043             557 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ENL isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338043
VERSION     XP_041338043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..557
                     /product="protein ENL isoform X1"
                     /calculated_mol_wt=62300
     Region          9..137
                     /region_name="YEATS_AF-9_like"
                     /note="YEATS domain found in ENL and AF-9-like proteins;
                     cd16906"
                     /db_xref="CDD:341125"
     Site            order(28,30,56,58..59,76..81,103..106)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:341125"
     Region          <145..>288
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          493..553
                     /region_name="AHD"
                     /note="ANC1 homology domain (AHD); pfam17793"
                     /db_xref="CDD:436050"
     CDS             1..557
                     /gene="MLLT1"
                     /coded_by="XM_041482109.1:236..1909"
                     /db_xref="GeneID:121361420"
ORIGIN      
        1 mdnqctvqvk lelghraqlr kkpttegfth dwmvfvrgpe qcdiqhfver vvfrlhesfp
       61 kpkrvckepp ykveesgyag fimpievhfk nkeepkkvcf tydlflnleg nppvnhlrce
      121 kltfnnptke frrkliragg vmvmpegaet vsrpspdypm lptiplsafs dpkktkpshg
      181 skdtnkessk askphkvtke hrerprkdse sknsskdler eqnkplkdss rkptenklpk
      241 eekappkaaf kepklavket klentspkgg pqpelksssk rpsnvespkp sakkqkksss
      301 kgvknilgts prtssssype kkqtkekmna kvekvksese akeikkpvem eesnsedets
      361 fksegvksvq sspsnsssss dsssdsdfep sqnhsqgplr smvedlqsee sddddsssge
      421 eaavkanpvs rdsrlslsds dsdnsadscp psrepppgqk lppannkasg rkspescnkp
      481 ekilkkgtyd kaytdelvel hrrlmalrer nvlqqivnli eetghfnvtn ttfdfdlfsl
      541 dettvrklqs yleavat
//
LOCUS       XP_041338052             554 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ENL isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338052
VERSION     XP_041338052.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482118.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="protein ENL isoform X2"
                     /calculated_mol_wt=62016
     Region          9..137
                     /region_name="YEATS_AF-9_like"
                     /note="YEATS domain found in ENL and AF-9-like proteins;
                     cd16906"
                     /db_xref="CDD:341125"
     Site            order(28,30,56,58..59,76..81,103..106)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:341125"
     Region          <145..>288
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          490..550
                     /region_name="AHD"
                     /note="ANC1 homology domain (AHD); pfam17793"
                     /db_xref="CDD:436050"
     CDS             1..554
                     /gene="MLLT1"
                     /coded_by="XM_041482118.1:236..1900"
                     /db_xref="GeneID:121361420"
ORIGIN      
        1 mdnqctvqvk lelghraqlr kkpttegfth dwmvfvrgpe qcdiqhfver vvfrlhesfp
       61 kpkrvckepp ykveesgyag fimpievhfk nkeepkkvcf tydlflnleg nppvnhlrce
      121 kltfnnptke frrkliragg vmvmpegaet vsrpspdypm lptiplsafs dpkktkpshg
      181 skdtnkessk askphkvtke hrerprkdse sknsskdler eqnkplkdss rkptenklpk
      241 eekappkaaf kepklavket klentspkgg pqpelksssk rpsnvespkp sakkqkksss
      301 kgvknilgts prtssssype kkqtkekmna kvekvksese akeikkpvem eesnsedets
      361 fksesvqssp snsssssdss sdsdfepsqn hsqgplrsmv edlqseesdd ddsssgeeaa
      421 vkanpvsrds rlslsdsdsd nsadscppsr epppgqklpp annkasgrks pescnkpeki
      481 lkkgtydkay tdelvelhrr lmalrernvl qqivnlieet ghfnvtnttf dfdlfsldet
      541 tvrklqsyle avat
//
LOCUS       XP_041338065             387 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 414 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338065
VERSION     XP_041338065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..387
                     /product="zinc finger protein 414 isoform X1"
                     /calculated_mol_wt=41415
     Region          63..152
                     /region_name="zf-C2H2_8"
                     /note="C2H2-type zinc ribbon; pfam15909"
                     /db_xref="CDD:464935"
     Region          63..85
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(70,72,74,76..77,80..81,84,106,108,112..113,116..117,
                     120,135,137,139,141..142,145..146,149)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          99..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          130..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..387
                     /gene="ZNF414"
                     /coded_by="XM_041482131.1:161..1324"
                     /db_xref="GeneID:121361431"
ORIGIN      
        1 mktekdeava tfslrgkfgt egagcsdpal pgapmpvags ggtpapelrp lkrrpvpgkh
       61 yqcssygckl afpsmqelmd hlkvhyrptq slegktfhcp tlgcsetfps mqdlmahmkv
      121 hykpnryfkc encllrfrth rslfkhlhvc sdsasgpapa prpalppaas aadkeppkpp
      181 ealpkppsal rplqkespaa gadsapaalp gpleplgsga phpfpllepg lfgpssltrf
      241 sgpapssvpg pflpyvppsp yglaqppaqh rlrpflpghg ppsvsnavwk ksqgvsvspl
      301 lpcfgsgvtp ghssnsrivw ehtrgrysct qcpfstasre dmtlhiedhr knpqpgrlea
      361 emdfgvglap fhaklppeme nslysql
//
LOCUS       XP_041338074             370 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 414 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338074
VERSION     XP_041338074.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482140.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="zinc finger protein 414 isoform X2"
                     /calculated_mol_wt=39816
     Region          63..152
                     /region_name="zf-C2H2_8"
                     /note="C2H2-type zinc ribbon; pfam15909"
                     /db_xref="CDD:464935"
     Region          63..85
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(70,72,74,76..77,80..81,84,106,108,112..113,116..117,
                     120,135,137,139,141..142,145..146,149)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          99..121
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          130..149
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..370
                     /gene="ZNF414"
                     /coded_by="XM_041482140.1:161..1273"
                     /db_xref="GeneID:121361431"
ORIGIN      
        1 mktekdeava tfslrgkfgt egagcsdpal pgapmpvags ggtpapelrp lkrrpvpgkh
       61 yqcssygckl afpsmqelmd hlkvhyrptq slegktfhcp tlgcsetfps mqdlmahmkv
      121 hykpnryfkc encllrfrth rslfkhlhvc sdsasgpapa prpalppaas aadkeppkpp
      181 ealpkppsal rplqkespaa gadsapaalp gpleplgsga phpfpllepg lfgpssltrf
      241 sgpapssvpg pflpyvppsp yglaqppaqh rlrpflpghg ppsvsnavwk ksqghssnsr
      301 ivwehtrgry sctqcpfsta sredmtlhie dhrknpqpgr leaemdfgvg lapfhaklpp
      361 emenslysql
//
LOCUS       XP_041338087             256 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-interferon-inducible lysosomal thiol reductase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338087
VERSION     XP_041338087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="gamma-interferon-inducible lysosomal thiol
                     reductase"
                     /calculated_mol_wt=27676
     Region          63..164
                     /region_name="GILT"
                     /note="Gamma interferon inducible lysosomal thiol
                     reductase (GILT); pfam03227"
                     /db_xref="CDD:460853"
     CDS             1..256
                     /gene="IFI30"
                     /coded_by="XM_041482153.1:92..862"
                     /db_xref="GeneID:121361439"
ORIGIN      
        1 mapavplavl alvalvapgl gvapgcdypa hrwcssrdta vacqvesrcp slphpaaapv
       61 elslyyeslc pacreflvlk lfptwlllpe emlsitlvpy gnaqernvsg kwdfqcqhgp
      121 eeclgnmmea clmheaknfs tyfpvifcle sgssvtknle aclqiyapev dsgrisacvq
      181 gdtgvalmhh naqltealep phqyvpwiti ngkhtdelqa qaeasllglv chlyqgekpe
      241 icggskaqki psgcrr
//
LOCUS       XP_041338098             249 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member B
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338098
VERSION     XP_041338098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member B isoform X1"
                     /calculated_mol_wt=28065
     Region          29..50
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <44..131
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          51..74
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          75..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..249
                     /gene="LOC121361446"
                     /coded_by="XM_041482164.1:16..765"
                     /db_xref="GeneID:121361446"
ORIGIN      
        1 mcgvkelvld ncrsedgkvv glssdfenle flsmininll svsnlpklnk lrklelsdnr
       61 isgglevlae ktpnlthlnl sgnkikdint leplkklpnl hsldlfncev tmlinyresv
      121 fallpqltyl dgfdadeqea pdsdpeadgd aleddyenge vegeeeedde eeddldeevi
      181 ddeededddl egeeeedgvd deeedeeedg eedeedeaee dhpcgekrkr sledegeeda
      241 edeeddedd
//
LOCUS       XP_041338108             248 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member B
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338108
VERSION     XP_041338108.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482174.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member B isoform X2"
                     /calculated_mol_wt=27965
     Region          29..50
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <44..131
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          51..74
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          75..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..248
                     /gene="LOC121361446"
                     /coded_by="XM_041482174.1:16..762"
                     /db_xref="GeneID:121361446"
ORIGIN      
        1 mcgvkelvld ncrsedgkvv glssdfenle flsmininll svsnlpklnk lrklelsdnr
       61 isgglevlae ktpnlthlnl sgnkikdint leplkklpnl hsldlfncev tmlinyresv
      121 fallpqltyl dgfdadeqea pdsdpeadgd aleddyenge egeeeeddee eddldeevid
      181 deededddle geeeedgvdd eeedeeedge edeedeaeed hpcgekrkrs ledegeedae
      241 deeddedd
//
LOCUS       XP_041338118             248 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member B
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041338118
VERSION     XP_041338118.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482184.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member B isoform X3"
                     /calculated_mol_wt=27965
     Region          29..50
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <44..131
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          51..74
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          75..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          100..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..248
                     /gene="LOC121361446"
                     /coded_by="XM_041482184.1:16..762"
                     /db_xref="GeneID:121361446"
ORIGIN      
        1 mcgvkelvld ncrsedgkvv glssdfenle flsmininll svsnlpklnk lrklelsdnr
       61 isgglevlae ktpnlthlnl sgnkikdint leplkklpnl hsldlfncev tmlinyresv
      121 fallpqltyl dgfdadeqea pdsdpeadgd aleddyenge egeeeeddee eddldeevid
      181 deededddle geeeedgvdd eeedeeedge edeedeaeed hpcgekrkrs ledegeedae
      241 deeddedd
//
LOCUS       XP_041338129             216 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member B
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041338129
VERSION     XP_041338129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482195.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member B isoform X4"
                     /calculated_mol_wt=24448
     Region          <11..98
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          18..41
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          42..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..216
                     /gene="LOC121361446"
                     /coded_by="XM_041482195.1:111..761"
                     /db_xref="GeneID:121361446"
ORIGIN      
        1 mininllsvs nlpklnklrk lelsdnrisg glevlaektp nlthlnlsgn kikdintlep
       61 lkklpnlhsl dlfncevtml inyresvfal lpqltyldgf dadeqeapds dpeadgdale
      121 ddyengeveg eeeeddeeed dldeevidde ededddlege eeedgvddee edeeedgeed
      181 eedeaeedhp cgekrkrsle degeedaede eddedd
//
LOCUS       XP_041338136             178 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member B
            isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041338136
VERSION     XP_041338136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member B isoform X5"
                     /calculated_mol_wt=20173
     Region          29..55
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          44..60
                     /region_name="LRRcap"
                     /note="occurring C-terminal to leucine-rich repeats;
                     smart00446"
                     /db_xref="CDD:197729"
     CDS             1..178
                     /gene="LOC121361446"
                     /coded_by="XM_041482202.1:244..780"
                     /db_xref="GeneID:121361446"
ORIGIN      
        1 msktvdaqcp aekgpgkgrr qlekklpnlh sldlfncevt mlinyresvf allpqltyld
       61 gfdadeqeap dsdpeadgda leddyengev egeeeeddee eddldeevid deededddle
      121 geeeedgvdd eeedeeedge edeedeaeed hpcgekrkrs ledegeedae deeddedd
//
LOCUS       XP_041338144             178 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member B
            isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041338144
VERSION     XP_041338144.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482210.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member B isoform X6"
                     /calculated_mol_wt=20173
     Region          29..55
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          44..60
                     /region_name="LRRcap"
                     /note="occurring C-terminal to leucine-rich repeats;
                     smart00446"
                     /db_xref="CDD:197729"
     CDS             1..178
                     /gene="LOC121361446"
                     /coded_by="XM_041482210.1:244..780"
                     /db_xref="GeneID:121361446"
ORIGIN      
        1 msktvdaqcp aekgpgkgrr qlekklpnlh sldlfncevt mlinyresvf allpqltyld
       61 gfdadeqeap dsdpeadgda leddyengev egeeeeddee eddldeevid deededddle
      121 geeeedgvdd eeedeeedge edeedeaeed hpcgekrkrs ledegeedae deeddedd
//
LOCUS       XP_041338153             263 aa            linear   VRT 06-MAY-2021
DEFINITION  alkaline ceramidase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338153
VERSION     XP_041338153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..263
                     /product="alkaline ceramidase 1"
                     /calculated_mol_wt=31035
     Region          6..251
                     /region_name="Ceramidase"
                     /note="pfam05875"
                     /db_xref="CDD:461766"
     CDS             1..263
                     /gene="ACER1"
                     /coded_by="XM_041482219.1:1..792"
                     /db_xref="GeneID:121361472"
ORIGIN      
        1 mpsifsyqsa evdwcesnfe rsaviaeyyn tisnvsffvl spallylnrq ycqkkavply
       61 fvsgllllvg lfsmyfhmtl syvgqlldel silwtlavay sfwypqayfp kciktrrhff
      121 wltgittvis tlmsfvkptl nayalnciaf hllyltwkel kkcndkrvhr maavmvmwwa
      181 laitswisdr wlcwlwqain fpyfhsfwhv liamsllycc plviyfdvsy empsfkpkle
      241 ywpsdswpvv vpyvtleeph kqc
//
LOCUS       XP_041338163             219 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 124 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338163
VERSION     XP_041338163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482229.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="coiled-coil domain-containing protein 124
                     isoform X1"
                     /calculated_mol_wt=25815
     Region          31..>210
                     /region_name="HSH155"
                     /note="U2 snRNP spliceosome subunit [RNA processing and
                     modification]; COG5181"
                     /db_xref="CDD:227508"
     Region          128..210
                     /region_name="Ccdc124"
                     /note="Coiled-coil domain-containing protein 124 /Oxs1;
                     pfam06244"
                     /db_xref="CDD:461858"
     CDS             1..219
                     /gene="CCDC124"
                     /coded_by="XM_041482229.1:736..1395"
                     /db_xref="GeneID:121361481"
ORIGIN      
        1 mpkkfqgens ksaaararra eakaaaearr qqeledelwk dedkhvlrke qrkeerekrr
       61 leqlerrkel qrlleeedsk lkgktpkqgn pgkitraqie envrkeqren tdavekeksh
      121 lelpleenln rrlpeegave arsiedaiaa lsvsqplerh perrlraafa afeelqlprl
      181 rrdnpnmrls qlrqllkkew mrspenplnq rhkpynshp
//
LOCUS       XP_041338169             219 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 124 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338169
VERSION     XP_041338169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="coiled-coil domain-containing protein 124
                     isoform X1"
                     /calculated_mol_wt=25815
     Region          31..>210
                     /region_name="HSH155"
                     /note="U2 snRNP spliceosome subunit [RNA processing and
                     modification]; COG5181"
                     /db_xref="CDD:227508"
     Region          128..210
                     /region_name="Ccdc124"
                     /note="Coiled-coil domain-containing protein 124 /Oxs1;
                     pfam06244"
                     /db_xref="CDD:461858"
     CDS             1..219
                     /gene="CCDC124"
                     /coded_by="XM_041482235.1:100..759"
                     /db_xref="GeneID:121361481"
ORIGIN      
        1 mpkkfqgens ksaaararra eakaaaearr qqeledelwk dedkhvlrke qrkeerekrr
       61 leqlerrkel qrlleeedsk lkgktpkqgn pgkitraqie envrkeqren tdavekeksh
      121 lelpleenln rrlpeegave arsiedaiaa lsvsqplerh perrlraafa afeelqlprl
      181 rrdnpnmrls qlrqllkkew mrspenplnq rhkpynshp
//
LOCUS       XP_041338175             219 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 124 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338175
VERSION     XP_041338175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482241.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="coiled-coil domain-containing protein 124
                     isoform X2"
                     /calculated_mol_wt=25815
     Region          31..>210
                     /region_name="HSH155"
                     /note="U2 snRNP spliceosome subunit [RNA processing and
                     modification]; COG5181"
                     /db_xref="CDD:227508"
     Region          128..210
                     /region_name="Ccdc124"
                     /note="Coiled-coil domain-containing protein 124 /Oxs1;
                     pfam06244"
                     /db_xref="CDD:461858"
     CDS             1..219
                     /gene="CCDC124"
                     /coded_by="XM_041482241.1:738..1397"
                     /db_xref="GeneID:121361481"
ORIGIN      
        1 mpkkfqgens ksaaararra eakaaaearr qqeledelwk dedkhvlrke qrkeerekrr
       61 leqlerrkel qrlleeedsk lkgktpkqgn pgkitraqie envrkeqren tdavekeksh
      121 lelpleenln rrlpeegave arsiedaiaa lsvsqplerh perrlraafa afeelqlprl
      181 rrdnpnmrls qlrqllkkew mrspenplnq rhkpynshp
//
LOCUS       XP_041338187             235 aa            linear   VRT 06-MAY-2021
DEFINITION  DAZ-associated protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338187
VERSION     XP_041338187.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482253.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..235
                     /product="DAZ-associated protein 1 isoform X1"
                     /calculated_mol_wt=24135
     CDS             1..235
                     /gene="DAZAP1"
                     /coded_by="XM_041482253.1:153..860"
                     /db_xref="GeneID:121361503"
ORIGIN      
        1 mtqrnrgpev evkraeprds ksqtpgppga sqwgsrimps aangwagqpp ptwqqgygpq
       61 gmwvpagqai ggygppppgr gappppppft syivstppgg fpppqgfpqg ygtpppfsfs
      121 ygapppppdq fappgvpppp atpgaaplaf ppppppsqat qdmskpptaq pefpysqfgy
      181 gqdlsgfgqg fsdpsqqppp yggpsvqpss gppaggsgfg rgqnhnvqgf hpyrr
//
LOCUS       XP_041338198             198 aa            linear   VRT 06-MAY-2021
DEFINITION  DAZ-associated protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338198
VERSION     XP_041338198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="DAZ-associated protein 1 isoform X2"
                     /calculated_mol_wt=20061
     CDS             1..198
                     /gene="DAZAP1"
                     /coded_by="XM_041482264.1:700..1296"
                     /db_xref="GeneID:121361503"
ORIGIN      
        1 mpsaangwag qppptwqqgy gpqgmwvpag qaiggygppp pgrgappppp pftsyivstp
       61 pggfpppqgf pqgygtpppf sfsygapppp pdqfappgvp pppatpgaap lafpppppps
      121 qatqdmskpp taqpefpysq fgygqdlsgf gqgfsdpsqq pppyggpsvq pssgppaggs
      181 gfgrgqnhnv qgfhpyrr
//
LOCUS       XP_041338207             198 aa            linear   VRT 06-MAY-2021
DEFINITION  DAZ-associated protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041338207
VERSION     XP_041338207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482273.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="DAZ-associated protein 1 isoform X3"
                     /calculated_mol_wt=20061
     CDS             1..198
                     /gene="DAZAP1"
                     /coded_by="XM_041482273.1:2700..3296"
                     /db_xref="GeneID:121361503"
ORIGIN      
        1 mpsaangwag qppptwqqgy gpqgmwvpag qaiggygppp pgrgappppp pftsyivstp
       61 pggfpppqgf pqgygtpppf sfsygapppp pdqfappgvp pppatpgaap lafpppppps
      121 qatqdmskpp taqpefpysq fgygqdlsgf gqgfsdpsqq pppyggpsvq pssgppaggs
      181 gfgrgqnhnv qgfhpyrr
//
LOCUS       XP_041338218             145 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S15 [Pyrgilauda ruficollis].
ACCESSION   XP_041338218
VERSION     XP_041338218.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482284.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..145
                     /product="40S ribosomal protein S15"
                     /calculated_mol_wt=16909
     Region          1..143
                     /region_name="PTZ00096"
                     /note="40S ribosomal protein S15; Provisional"
                     /db_xref="CDD:185442"
     CDS             1..145
                     /gene="RPS15"
                     /coded_by="XM_041482284.1:131..568"
                     /db_xref="GeneID:121361513"
ORIGIN      
        1 maeveqkkkr tfrkftyrgv dldqlldmsy eqlmqlysar qrrrlnrglr rkqhsllkrl
       61 rkakkeappm ekpevvkthl rdmiilpemv gsmvgvyngk tfnqveikpe mighylgefs
      121 itykpvkhgr pgigathssr fiplk
//
LOCUS       XP_041338229             324 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338229
VERSION     XP_041338229.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482295.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="phospholipid phosphatase 2 isoform X1"
                     /calculated_mol_wt=36451
     Region          134..280
                     /region_name="PAP2_wunen"
                     /note="PAP2, wunen subfamily. Most likely a family of
                     membrane associated phosphatidic acid phosphatases. Wunen
                     is a drosophila protein expressed in the central nervous
                     system, which provides repellent activity towards
                     primordial germ cells (PGCs), controls the...; cd03384"
                     /db_xref="CDD:239479"
     Site            order(157,164,206..208,254,260,264)
                     /site_type="active"
                     /db_xref="CDD:239479"
     CDS             1..324
                     /gene="PLPP2"
                     /coded_by="XM_041482295.1:465..1439"
                     /db_xref="GeneID:121361520"
ORIGIN      
        1 mflklpqgsn elrrtknkgp drdrgwsfpg cgaggeagsr crservslpr agcfiflasl
       61 pfiiltlvns pykrgfycnd dsirypykad tithglmagv tisctviiis sgeaylvyte
      121 rlyskseynn ylaalykvvg tflfggaisq sltdlakymi grlrpnflav cnpdwskvnc
      181 siyvqlenvc qgesrnvtes rlsfysghss fgmycmmfla lyvqarlvgk warllrptiq
      241 flliafaiyv gytrvsdykh hwsdvlvgll qgaliavliv hyvsdffkqr pprqceekdp
      301 erkpslpltl sdpdhnhysy rgap
//
LOCUS       XP_041338238             284 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338238
VERSION     XP_041338238.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482304.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="phospholipid phosphatase 2 isoform X2"
                     /calculated_mol_wt=32142
     Region          94..240
                     /region_name="PAP2_wunen"
                     /note="PAP2, wunen subfamily. Most likely a family of
                     membrane associated phosphatidic acid phosphatases. Wunen
                     is a drosophila protein expressed in the central nervous
                     system, which provides repellent activity towards
                     primordial germ cells (PGCs), controls the...; cd03384"
                     /db_xref="CDD:239479"
     Site            order(117,124,166..168,214,220,224)
                     /site_type="active"
                     /db_xref="CDD:239479"
     CDS             1..284
                     /gene="PLPP2"
                     /coded_by="XM_041482304.1:125..979"
                     /db_xref="GeneID:121361520"
ORIGIN      
        1 merrkvfval dvlclavasl pfiiltlvns pykrgfycnd dsirypykad tithglmagv
       61 tisctviiis sgeaylvyte rlyskseynn ylaalykvvg tflfggaisq sltdlakymi
      121 grlrpnflav cnpdwskvnc siyvqlenvc qgesrnvtes rlsfysghss fgmycmmfla
      181 lyvqarlvgk warllrptiq flliafaiyv gytrvsdykh hwsdvlvgll qgaliavliv
      241 hyvsdffkqr pprqceekdp erkpslpltl sdpdhnhysy rgap
//
LOCUS       XP_041338248             228 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041338248
VERSION     XP_041338248.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482314.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="phospholipid phosphatase 2 isoform X3"
                     /calculated_mol_wt=25752
     Region          38..184
                     /region_name="PAP2_wunen"
                     /note="PAP2, wunen subfamily. Most likely a family of
                     membrane associated phosphatidic acid phosphatases. Wunen
                     is a drosophila protein expressed in the central nervous
                     system, which provides repellent activity towards
                     primordial germ cells (PGCs), controls the...; cd03384"
                     /db_xref="CDD:239479"
     Site            order(61,68,110..112,158,164,168)
                     /site_type="active"
                     /db_xref="CDD:239479"
     CDS             1..228
                     /gene="PLPP2"
                     /coded_by="XM_041482314.1:231..917"
                     /db_xref="GeneID:121361520"
ORIGIN      
        1 magvtisctv iiissgeayl vyterlysks eynnylaaly kvvgtflfgg aisqsltdla
       61 kymigrlrpn flavcnpdws kvncsiyvql envcqgesrn vtesrlsfys ghssfgmycm
      121 mflalyvqar lvgkwarllr ptiqflliaf aiyvgytrvs dykhhwsdvl vgllqgalia
      181 vlivhyvsdf fkqrpprqce ekdperkpsl pltlsdpdhn hysyrgap
//
LOCUS       XP_041338260             737 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338260
VERSION     XP_041338260.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482326.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="transducin-like enhancer protein 2 isoform X1"
                     /calculated_mol_wt=79298
     Region          17..123
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          134..>345
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          332..735
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          454..493
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          501..539
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          544..580
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          587..622
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          627..660
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          668..702
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          709..733
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..737
                     /gene="TLE2"
                     /coded_by="XM_041482326.1:200..2413"
                     /db_xref="GeneID:121361534"
ORIGIN      
        1 mfpqgrhppp vqpgqpfkfs vleicdrike efqflqaqyh slkleceklv sektemqrhy
       61 vmyyemsygl niemhkqaei vkrlsaicaq iipfltqehq qqvlqavera kqvtmgelns
      121 ivgqqqlqhl sqhasplplt phpssmqpps lsgtagllal sgalmaqvql atkedrvaqd
      181 genrehtpsr svssspaesl qaeehtglkr kreekelpgh sdsdgeksdc nlvvdedpps
      241 dpgspgrsps hrrapsrrel pgspasvgsg gsaapgqtee qsptdsvasa ptskpssssp
      301 prdsltpgpg pssavalrpp pakapstdsv tlrsplsscs pytsslamvp haalsgelpa
      361 pglymgihls vpqasstlly grspgvafes hphlrastls sslptipggk paysfhvsad
      421 gqmqpvpfpp dalmgsgipr harqlhtlsh gevvcavtis nstrhvytgg kgcvkvwdvg
      481 qpgtktavaq ldclnrdnyi rsckllpdgr slivggeast lsiwdlaapt prikaeltss
      541 apacyalais pdakvcfscc sdgnivvwdl qnqtmvrqfq ghtdgascid isnygtklwt
      601 ggldntvrcw dlregrqlqq hdfssqifsl gycpmgewla vgmessnvei lhvtkpdkyq
      661 lhlhescvls lkfascgkwf vstgkdnlln awrapygasi fqskesssvl scdisvndkf
      721 ivtgsgdkka tvyevvy
//
LOCUS       XP_041338268             737 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338268
VERSION     XP_041338268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="transducin-like enhancer protein 2 isoform X2"
                     /calculated_mol_wt=78219
     Region          17..123
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          134..>345
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <443..735
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          454..493
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          501..539
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          544..581
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          629..658
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          666..702
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          709..733
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..737
                     /gene="TLE2"
                     /coded_by="XM_041482334.1:209..2422"
                     /db_xref="GeneID:121361534"
ORIGIN      
        1 mfpqgrhppp vqpgqpfkfs vleicdrike efqflqaqyh slkleceklv sektemqrhy
       61 vmyyemsygl niemhkqaei vkrlsaicaq iipfltqehq qqvlqavera kqvtmgelns
      121 ivgqqqlqhl sqhasplplt phpssmqpps lsgtagllal sgalmaqvql atkedrvaqd
      181 genrehtpsr svssspaesl qaeehtglkr kreekelpgh sdsdgeksdc nlvvdedpps
      241 dpgspgrsps hrrapsrrel pgspasvgsg gsaapgqtee qsptdsvasa ptskpssssp
      301 prdsltpgpg pssavalrpp pakapstdsv tlrsplsscs pytsslamvp haalsgelpa
      361 pglymgihls vpqasstlly grspgvafes hphlrastls sslptipggk paysfhvsad
      421 gqmqpvpfpp dalmgsgipr harqlhtlsh gevvcavtis nstrhvytgg kgcvkvwdvg
      481 qpgtktavaq ldclnrdnyi rsckllpdgr slivggeast lsiwdlaapt prikaeltss
      541 apacyalais pdakvcfscc sdgnivvwdl qnqtmvsfka trmvpaalts ltmapscgqg
      601 gwttpcaagt cgragscsst tsaprsspwa tapwesgwpw awraatwrsc tspnptstsc
      661 tstravssls nsppavgkwf vstgkdnlln awrapygasi fqskesssvl scdisvndkf
      721 ivtgsgdkka tvyevvy
//
LOCUS       XP_041338275             736 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338275
VERSION     XP_041338275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..736
                     /product="transducin-like enhancer protein 2 isoform X3"
                     /calculated_mol_wt=79170
     Region          17..132
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          130..>344
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          331..734
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          453..492
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          500..538
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          543..579
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          586..621
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          626..659
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          667..701
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          708..732
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..736
                     /gene="TLE2"
                     /coded_by="XM_041482341.1:201..2411"
                     /db_xref="GeneID:121361534"
ORIGIN      
        1 mfpqgrhppp vqpgqpfkfs vleicdrike efqflqaqyh slkleceklv sektemqrhy
       61 vmyyemsygl niemhkqaei vkrlsaicaq iipfltqehq qqvlqavera kqvtmgelns
      121 ivgqqlqhls qhasplpltp hpssmqppsl sgtagllals galmaqvqla tkedrvaqdg
      181 enrehtpsrs vssspaeslq aeehtglkrk reekelpghs dsdgeksdcn lvvdedppsd
      241 pgspgrspsh rrapsrrelp gspasvgsgg saapgqteeq sptdsvasap tskpsssspp
      301 rdsltpgpgp ssavalrppp akapstdsvt lrsplsscsp ytsslamvph aalsgelpap
      361 glymgihlsv pqasstllyg rspgvafesh phlrastlss slptipggkp aysfhvsadg
      421 qmqpvpfppd almgsgiprh arqlhtlshg evvcavtisn strhvytggk gcvkvwdvgq
      481 pgtktavaql dclnrdnyir sckllpdgrs livggeastl siwdlaaptp rikaeltssa
      541 pacyalaisp dakvcfsccs dgnivvwdlq nqtmvrqfqg htdgascidi snygtklwtg
      601 gldntvrcwd lregrqlqqh dfssqifslg ycpmgewlav gmessnveil hvtkpdkyql
      661 hlhescvlsl kfascgkwfv stgkdnllna wrapygasif qskesssvls cdisvndkfi
      721 vtgsgdkkat vyevvy
//
LOCUS       XP_041338282             704 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338282
VERSION     XP_041338282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..704
                     /product="transducin-like enhancer protein 2 isoform X4"
                     /calculated_mol_wt=75574
     Region          17..123
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          134..>345
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          332..681
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          454..493
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          501..539
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          544..580
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          587..622
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          627..660
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..704
                     /gene="TLE2"
                     /coded_by="XM_041482348.1:205..2319"
                     /db_xref="GeneID:121361534"
ORIGIN      
        1 mfpqgrhppp vqpgqpfkfs vleicdrike efqflqaqyh slkleceklv sektemqrhy
       61 vmyyemsygl niemhkqaei vkrlsaicaq iipfltqehq qqvlqavera kqvtmgelns
      121 ivgqqqlqhl sqhasplplt phpssmqpps lsgtagllal sgalmaqvql atkedrvaqd
      181 genrehtpsr svssspaesl qaeehtglkr kreekelpgh sdsdgeksdc nlvvdedpps
      241 dpgspgrsps hrrapsrrel pgspasvgsg gsaapgqtee qsptdsvasa ptskpssssp
      301 prdsltpgpg pssavalrpp pakapstdsv tlrsplsscs pytsslamvp haalsgelpa
      361 pglymgihls vpqasstlly grspgvafes hphlrastls sslptipggk paysfhvsad
      421 gqmqpvpfpp dalmgsgipr harqlhtlsh gevvcavtis nstrhvytgg kgcvkvwdvg
      481 qpgtktavaq ldclnrdnyi rsckllpdgr slivggeast lsiwdlaapt prikaeltss
      541 apacyalais pdakvcfscc sdgnivvwdl qnqtmvrqfq ghtdgascid isnygtklwt
      601 ggldntvrcw dlregrqlqq hdfssqifsl gycpmgewla vgmessnvei lhvtkpdkyq
      661 lhlhescvls lkfascgrev vcehgqgqpa qclagalwgq hlpv
//
LOCUS       XP_041338296             445 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338296
VERSION     XP_041338296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="transducin-like enhancer protein 1 isoform X1"
                     /calculated_mol_wt=46958
     Region          34..148
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     CDS             1..445
                     /gene="LOC121361561"
                     /coded_by="XM_041482362.1:192..1529"
                     /db_xref="GeneID:121361561"
ORIGIN      
        1 mfpqnrppah lqapsaasga avaasaipst pqslkltype tldrikeefq flqnqyhslk
       61 leceklatek teiqrhyvmy yemsyglnie mhkqteiakr lnvicaqlip flsqehqqqv
      121 vqaverakqv tmtdlnaaig hqlqtqhlsh happipltph psgmqptgla gissasglla
      181 lsgalgaqaq llakedrgvh dsepratdrd pgpsslalsn geraraiaey lsgskkrkve
      241 ekefvtdygs dadksednlv vdedpssphs vhsyssreng vekvplgrke amplsptsma
      301 sssstspsrs kdaptvekag tpslksstpt sqgdtlpgss saqqfrpaaa kvpvdplalg
      361 lrnplgvqsp ysaafglahp avngdvagsg ayaslhlmsp qlngaaaavg aggygrsplv
      421 gydphphmrv pglvtgmqvg tsgkp
//
LOCUS       XP_041338306             445 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338306
VERSION     XP_041338306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="transducin-like enhancer protein 1 isoform X1"
                     /calculated_mol_wt=46958
     Region          34..148
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     CDS             1..445
                     /gene="LOC121361561"
                     /coded_by="XM_041482372.1:140..1477"
                     /db_xref="GeneID:121361561"
ORIGIN      
        1 mfpqnrppah lqapsaasga avaasaipst pqslkltype tldrikeefq flqnqyhslk
       61 leceklatek teiqrhyvmy yemsyglnie mhkqteiakr lnvicaqlip flsqehqqqv
      121 vqaverakqv tmtdlnaaig hqlqtqhlsh happipltph psgmqptgla gissasglla
      181 lsgalgaqaq llakedrgvh dsepratdrd pgpsslalsn geraraiaey lsgskkrkve
      241 ekefvtdygs dadksednlv vdedpssphs vhsyssreng vekvplgrke amplsptsma
      301 sssstspsrs kdaptvekag tpslksstpt sqgdtlpgss saqqfrpaaa kvpvdplalg
      361 lrnplgvqsp ysaafglahp avngdvagsg ayaslhlmsp qlngaaaavg aggygrsplv
      421 gydphphmrv pglvtgmqvg tsgkp
//
LOCUS       XP_041338316             363 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338316
VERSION     XP_041338316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="transducin-like enhancer protein 1 isoform X2"
                     /calculated_mol_wt=37622
     Region          <1..66
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     CDS             1..363
                     /gene="LOC121361561"
                     /coded_by="XM_041482382.1:647..1738"
                     /db_xref="GeneID:121361561"
ORIGIN      
        1 msyglniemh kqteiakrln vicaqlipfl sqehqqqvvq averakqvtm tdlnaaighq
       61 lqtqhlshha ppipltphps gmqptglagi ssasgllals galgaqaqll akedrgvhds
      121 epratdrdpg psslalsnge raraiaeyls gskkrkveek efvtdygsda dksednlvvd
      181 edpssphsvh syssrengve kvplgrkeam plsptsmass sstspsrskd aptvekagtp
      241 slksstptsq gdtlpgsssa qqfrpaaakv pvdplalglr nplgvqspys aafglahpav
      301 ngdvagsgay aslhlmspql ngaaaavgag gygrsplvgy dphphmrvpg lvtgmqvgts
      361 gkp
//
LOCUS       XP_041338330             124 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338330
VERSION     XP_041338330.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482396.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..124
                     /product="transducin-like enhancer protein 1"
                     /calculated_mol_wt=13363
     Region          51..89
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <64..122
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          96..120
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..124
                     /gene="LOC121361570"
                     /coded_by="XM_041482396.1:132..506"
                     /db_xref="GeneID:121361570"
ORIGIN      
        1 mmvrggvsip lgavlaagak llfvfpwlma gravaaslcv fhslcriccw lwcgdmrllc
       61 pstgkwfvst gkdnllnawr tpygasifqs ketssvlscd istddqfivt gsgdkkatvy
      121 eiiy
//
LOCUS       XP_041338343             772 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent calcium channel beta subunit-associated
            regulatory protein [Pyrgilauda ruficollis].
ACCESSION   XP_041338343
VERSION     XP_041338343.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482409.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="voltage-dependent calcium channel beta
                     subunit-associated regulatory protein"
                     /calculated_mol_wt=83106
     Region          39..>81
                     /region_name="EphA2_TM"
                     /note="Ephrin type-A receptor 2 transmembrane domain;
                     pfam14575"
                     /db_xref="CDD:464211"
     CDS             1..772
                     /gene="LOC121361578"
                     /coded_by="XM_041482409.1:83..2401"
                     /db_xref="GeneID:121361578"
ORIGIN      
        1 msddptpwdn atesatavpg evspqdgyvl llallsifig gtlvllsgil iicrrccead
       61 rrhsrasddp ektnttyldd sqqaqditgk aedpeclsss syrdaeserf lssssstarr
      121 vsfneaalfd qgkktqekgr rytltegdfh hlknarlthl hlpppalkiv tihecessen
      181 slamtprlpp pkpglaifqp pagalprpvl pshavgpssa lpgdtynstv dtsfteasps
      241 assdsgegps ftatprsgka agagsagpge ppatppqgtv lqfftrlrrh asldgaspyf
      301 rikkwklest qrassldtrg spkrrqfqrq raasesmdqe drdphqtdii qyiahtddvs
      361 fhpaggpflp spaspppslg rlepgegvag spgepsvpeq psayhdiwsl raslelyaas
      421 ersndqdsvr sdggdsvsst sgvppclsps ldepegpeek fwgrpkpees epgtrkllqm
      481 dsgyasieap srggeegppk dqtasekric ftsagrkgti fesfegrepe eeedeeeeeg
      541 gsttlgaagg ghlrphspla wspygqmfpg reglprrdys idektdalfn afvrhdpqfd
      601 esplrgkhrs rthlrkqwqh tkqfsdpgvr ypalerhrtp lrrgdsanyp ldsrfhsplp
      661 rivsagdeea aeasdgvppa palpdpeiqv iveepgeaap epkagseppe dddcpgpgrc
      721 lglgsgselm dkiaggleer lyghlrkaae retpectvav aasdaspdhs tv
//
LOCUS       XP_041338353             772 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent calcium channel beta subunit-associated
            regulatory protein [Pyrgilauda ruficollis].
ACCESSION   XP_041338353
VERSION     XP_041338353.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482419.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="voltage-dependent calcium channel beta
                     subunit-associated regulatory protein"
                     /calculated_mol_wt=83106
     Region          39..>81
                     /region_name="EphA2_TM"
                     /note="Ephrin type-A receptor 2 transmembrane domain;
                     pfam14575"
                     /db_xref="CDD:464211"
     CDS             1..772
                     /gene="LOC121361578"
                     /coded_by="XM_041482419.1:606..2924"
                     /db_xref="GeneID:121361578"
ORIGIN      
        1 msddptpwdn atesatavpg evspqdgyvl llallsifig gtlvllsgil iicrrccead
       61 rrhsrasddp ektnttyldd sqqaqditgk aedpeclsss syrdaeserf lssssstarr
      121 vsfneaalfd qgkktqekgr rytltegdfh hlknarlthl hlpppalkiv tihecessen
      181 slamtprlpp pkpglaifqp pagalprpvl pshavgpssa lpgdtynstv dtsfteasps
      241 assdsgegps ftatprsgka agagsagpge ppatppqgtv lqfftrlrrh asldgaspyf
      301 rikkwklest qrassldtrg spkrrqfqrq raasesmdqe drdphqtdii qyiahtddvs
      361 fhpaggpflp spaspppslg rlepgegvag spgepsvpeq psayhdiwsl raslelyaas
      421 ersndqdsvr sdggdsvsst sgvppclsps ldepegpeek fwgrpkpees epgtrkllqm
      481 dsgyasieap srggeegppk dqtasekric ftsagrkgti fesfegrepe eeedeeeeeg
      541 gsttlgaagg ghlrphspla wspygqmfpg reglprrdys idektdalfn afvrhdpqfd
      601 esplrgkhrs rthlrkqwqh tkqfsdpgvr ypalerhrtp lrrgdsanyp ldsrfhsplp
      661 rivsagdeea aeasdgvppa palpdpeiqv iveepgeaap epkagseppe dddcpgpgrc
      721 lglgsgselm dkiaggleer lyghlrkaae retpectvav aasdaspdhs tv
//
LOCUS       XP_041338366             440 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase STK11 [Pyrgilauda ruficollis].
ACCESSION   XP_041338366
VERSION     XP_041338366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="serine/threonine-protein kinase STK11"
                     /calculated_mol_wt=49622
     Region          55..309
                     /region_name="STKc_LKB1"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Liver Kinase B1; cd14119"
                     /db_xref="CDD:271021"
     Site            order(55..59,63,76,78,111,129..132,136,138,176,178,
                     180..181,183,194,197,215..218)
                     /site_type="active"
                     /db_xref="CDD:271021"
     Site            order(55..59,63,76,78,111,129..132,136,176,178,180..181,
                     183,194)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271021"
     Site            order(59,136,138,176,178,180,197,215..218)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271021"
     Site            order(70..74,106,186..187)
                     /site_type="other"
                     /note="STRAD interface [polypeptide binding]"
                     /db_xref="CDD:271021"
     Site            order(100,165,168..169,171,201..207,301,307)
                     /site_type="other"
                     /note="MO25 interface [polypeptide binding]"
                     /db_xref="CDD:271021"
     Site            193..218
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271021"
     CDS             1..440
                     /gene="STK11"
                     /coded_by="XM_041482432.1:1348..2670"
                     /db_xref="GeneID:121361588"
ORIGIN      
        1 mdlqepqqlg mfaeselmsv gmdtfihrid steviyqprr krakligkyl mgdllgegsy
       61 gkvkemldse tlcrravkil kkkklrripn geanvkkeiq llrrlrhknv iqlvdvlyne
      121 ekqkmymvme ycvcgmqeml dsvpekrfpv fqahgyfcql idgleylhsq givhkdikpg
      181 nlllttngtl kisdlgvaea lhpfaeddtc rtsqgspafq ppeiangldt fsgfkvdiws
      241 agvtlynitt glypfegdni yklfenigkg dytipedcgp plsdllrgml eydpakrfsi
      301 qqirqhnwfr kkhaqaealv pippspetkd rwrsmtavpy ledlhgynee edddlydied
      361 diiytqdftv pgqvpeeeag qngqsrgkgl pkavcmngte pgqlsarakg errasassnp
      421 srkacsassk irklstckqq
//
LOCUS       XP_041338376             166 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP synthase subunit delta, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041338376
VERSION     XP_041338376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482442.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..166
                     /product="ATP synthase subunit delta, mitochondrial"
                     /calculated_mol_wt=17201
     Region          36..160
                     /region_name="F1-ATPase_delta"
                     /note="mitochondrial ATP synthase delta subunit; cd12152"
                     /db_xref="CDD:213395"
     Site            order(39,42..44,46,49,72..76,99..104,111,113..115)
                     /site_type="other"
                     /note="gamma subunit interface [polypeptide binding]"
                     /db_xref="CDD:213395"
     Site            order(44,61,77..78,80,96,98..100,115..116,118,121..122,
                     124,131,149..150,152..153,156,158)
                     /site_type="other"
                     /note="epsilon subunit interface [polypeptide binding]"
                     /db_xref="CDD:213395"
     Site            order(55,57,63..64,66,68,70..72,86)
                     /site_type="other"
                     /note="LBP interface [polypeptide binding]"
                     /db_xref="CDD:213395"
     CDS             1..166
                     /gene="ATP5F1D"
                     /coded_by="XM_041482442.1:40..540"
                     /db_xref="GeneID:121361596"
ORIGIN      
        1 maamfcarrl lrltrpslpl ppargyadpa agpaamaftf asptqvfyng anvkqvdvpt
       61 ltgsfgilas hvptlqvlrp gvvtvhaedg tatkyfvssg svtvhadstv qvlaeeavtm
      121 dmldlataks nlekavsema aasdeaakae aqikveanea lvkale
//
LOCUS       XP_041338389             608 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 3A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338389
VERSION     XP_041338389.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482455.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="AT-rich interactive domain-containing protein
                     3A"
                     /calculated_mol_wt=65007
     Region          235..367
                     /region_name="ARID_ARID3A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 3A (ARID3A) and
                     similar proteins; cd16878"
                     /db_xref="CDD:350642"
     Site            order(277..283,308,310..311,314,322..325,327..329,331,
                     361..362)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350642"
     CDS             1..608
                     /gene="ARID3A"
                     /coded_by="XM_041482455.1:587..2413"
                     /db_xref="GeneID:121361603"
ORIGIN      
        1 mklqavmenl qrqqrarlqq alearqqeqq qqqqpprcts ppaqpsqppg qlpastrgrg
       61 qeaapapsee gaepesahiq raqmaalaam raaaaglshs pspglsdesq aseeeeeeer
      121 geeeedgggy qqemgseeee elkgkwdedd feedlgeeee eeedeeeeed yeeeedmgee
      181 glssaeavra gagslllrkp papqhyrgep prlpggqerl ppglghtqpp ppapdhgdwt
      241 yeeqfkqlye ldgdprrkef lddlfsfmqk rgtpvnripi makqvldlym lytlvtekgg
      301 lvevinkklw reitkglslp tsitsaaftl rtqymkylyp yecekrglsn pnelqaaids
      361 nrregrrqgf ggslfayspg gthgllsspk lpvpalglas atnggaitpg qkikkeedsp
      421 ipismpsrlp vslaghpvva aqaaavqvaa aaqaaaleql reklesgepp ekklalvtde
      481 qqrlmqralq qnllamtaql pmsirinsqg trspenrpda aaassngtns ismsveingi
      541 vytgvlfaqt pgpsssssss sssayskgng gssrssggsg vgsgggsvpp apaglavpps
      601 stsnsasp
//
LOCUS       XP_041338396             608 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 3A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338396
VERSION     XP_041338396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482462.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="AT-rich interactive domain-containing protein
                     3A"
                     /calculated_mol_wt=65007
     Region          235..367
                     /region_name="ARID_ARID3A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 3A (ARID3A) and
                     similar proteins; cd16878"
                     /db_xref="CDD:350642"
     Site            order(277..283,308,310..311,314,322..325,327..329,331,
                     361..362)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350642"
     CDS             1..608
                     /gene="ARID3A"
                     /coded_by="XM_041482462.1:630..2456"
                     /db_xref="GeneID:121361603"
ORIGIN      
        1 mklqavmenl qrqqrarlqq alearqqeqq qqqqpprcts ppaqpsqppg qlpastrgrg
       61 qeaapapsee gaepesahiq raqmaalaam raaaaglshs pspglsdesq aseeeeeeer
      121 geeeedgggy qqemgseeee elkgkwdedd feedlgeeee eeedeeeeed yeeeedmgee
      181 glssaeavra gagslllrkp papqhyrgep prlpggqerl ppglghtqpp ppapdhgdwt
      241 yeeqfkqlye ldgdprrkef lddlfsfmqk rgtpvnripi makqvldlym lytlvtekgg
      301 lvevinkklw reitkglslp tsitsaaftl rtqymkylyp yecekrglsn pnelqaaids
      361 nrregrrqgf ggslfayspg gthgllsspk lpvpalglas atnggaitpg qkikkeedsp
      421 ipismpsrlp vslaghpvva aqaaavqvaa aaqaaaleql reklesgepp ekklalvtde
      481 qqrlmqralq qnllamtaql pmsirinsqg trspenrpda aaassngtns ismsveingi
      541 vytgvlfaqt pgpsssssss sssayskgng gssrssggsg vgsgggsvpp apaglavpps
      601 stsnsasp
//
LOCUS       XP_041338403             608 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 3A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338403
VERSION     XP_041338403.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482469.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="AT-rich interactive domain-containing protein
                     3A"
                     /calculated_mol_wt=65007
     Region          235..367
                     /region_name="ARID_ARID3A"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 3A (ARID3A) and
                     similar proteins; cd16878"
                     /db_xref="CDD:350642"
     Site            order(277..283,308,310..311,314,322..325,327..329,331,
                     361..362)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350642"
     CDS             1..608
                     /gene="ARID3A"
                     /coded_by="XM_041482469.1:614..2440"
                     /db_xref="GeneID:121361603"
ORIGIN      
        1 mklqavmenl qrqqrarlqq alearqqeqq qqqqpprcts ppaqpsqppg qlpastrgrg
       61 qeaapapsee gaepesahiq raqmaalaam raaaaglshs pspglsdesq aseeeeeeer
      121 geeeedgggy qqemgseeee elkgkwdedd feedlgeeee eeedeeeeed yeeeedmgee
      181 glssaeavra gagslllrkp papqhyrgep prlpggqerl ppglghtqpp ppapdhgdwt
      241 yeeqfkqlye ldgdprrkef lddlfsfmqk rgtpvnripi makqvldlym lytlvtekgg
      301 lvevinkklw reitkglslp tsitsaaftl rtqymkylyp yecekrglsn pnelqaaids
      361 nrregrrqgf ggslfayspg gthgllsspk lpvpalglas atnggaitpg qkikkeedsp
      421 ipismpsrlp vslaghpvva aqaaavqvaa aaqaaaleql reklesgepp ekklalvtde
      481 qqrlmqralq qnllamtaql pmsirinsqg trspenrpda aaassngtns ismsveingi
      541 vytgvlfaqt pgpsssssss sssayskgng gssrssggsg vgsgggsvpp apaglavpps
      601 stsnsasp
//
LOCUS       XP_041338417             744 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-12 receptor subunit beta-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338417
VERSION     XP_041338417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..744
                     /product="interleukin-12 receptor subunit beta-1"
                     /calculated_mol_wt=80545
     Region          431..500
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     CDS             1..744
                     /gene="IL12RB1"
                     /coded_by="XM_041482483.1:86..2320"
                     /db_xref="GeneID:121361617"
ORIGIN      
        1 mlgwllaala alaqggtlaa hdfscwkkcd thkpfycswp plgpagntsy ilnlcfekys
       61 pchrfeagtv tsyslshtqv ytlvnttawv earwgdqihr tpnhtlhlse avklvppptg
      121 msfsktggql rlrvprpqcr slkqppqhea rfwrvggssw tqvtcetmmv takensvtca
      181 lgvngtfvvq lrhkpphwss ywsdwssnis vpeeilrrpv lshqlgklgr dgqrvlrlsw
      241 qpvlkeqrsv tyklhvnmla cgcagsheed tvvlpgevte hnltlsgaey eilltagnaa
      301 gpgpaqqlrv paeqragtap letlttpnip rffpdlsfke vsvagsnvta qweapvagea
      361 fcfeqqtlpg ppkqgvcigq efpansthvq agalgapgch rlavhgwdme rgwatfalwh
      421 hyssngaysl dvpfnistgg aavvlqweps praacpgala kylvchvaeg dnvtysevda
      481 tasnytlqnl qpgtgyrvgv wevtedsert csawwpfqtk algpqgapwr gnlnylgiwl
      541 gvpaaaaiyh lskrrarrll fpplpkpvgt kaiqfsagdm sqgqprtgll epserfspae
      601 lllpepnpse ettdtgtqsa vphpdvsqps palekpaaav mslpgcgeel pfayrrqeml
      661 spvgsppsgs tsctghppge eeeeeeeegr qglhqplmpi allisdkpii irdeegwdpp
      721 psagwsggdg hgaspgarsv cvgr
//
LOCUS       XP_041338431            2242 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase ABCA7 [Pyrgilauda ruficollis].
ACCESSION   XP_041338431
VERSION     XP_041338431.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482497.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2242
                     /product="phospholipid-transporting ATPase ABCA7"
                     /calculated_mol_wt=246321
     Region          1..2207
                     /region_name="rim_protein"
                     /note="retinal-specific rim ABC transporter; TIGR01257"
                     /db_xref="CDD:130324"
     CDS             1..2242
                     /gene="ABCA7"
                     /coded_by="XM_041482497.1:268..6996"
                     /db_xref="GeneID:121361621"
ORIGIN      
        1 mavgtqlgll lwknftyrrr qriqlaieil wplflflili svrrshppfk qhechfpnka
       61 lpsagtlpwl qgiicnmnnp cfrhpaagea pgvvgnfdgs ivsrlltear rvllrghgqr
      121 llrsfarllp alrrlrdsgn qrsalpvrey lredetfsrf lrtntslppa lvdelmgarl
      181 sprifslesi rlplkalvcn asvlggflvg gdadstqslq qglcalpssq lravegsfls
      241 qmdfprllae qlsselsgia gtvealgsfl rdaaslmeev ssmtslaelr qeieglrvpn
      301 tstgaftals hiacghpegg glripslnwy edndvkafld rnssehrpva sgstspfcre
      361 llrslesspl sqifwrgikp lfvgkilytp pgpgpdsvma evnrtfrela vlgelggawq
      421 elgpriytll nsslemqvlq dlllapstaq lldgflngts wklpelvtfl tgpaggpglt
      481 whqvyvdvdt vlsmlsqfme cvcldkieav ateeqlvara lelleeqqfw aavvfqppin
      541 atapglpphv rykirmdidd vtrtnkikdr fwdpgpaadp fsdlryvwgg fvyiqdlveq
      601 avvrvqtgaa prtgvyvqqm pypcyvddvf lrvlnrslpl fmtlawiysv amiikgvvhe
      661 ketrlketmk tmglssgilw lswflssfip fllssallvl ilklgnilpy sdpaviflfl
      721 gtfsvatisq cflistffpr anlasacggi iyfslylpyv lcvawrdyit fpirvlvsll
      781 spvafgfgcd yfslyeeqgv giqwhnlaas pvpgdpysfa aamgllllda vlyglatwyl
      841 egvfpgqygi pkpwnfpflk sywfgessss ghslyhtsph tapqvlveep padlqpgvsi
      901 rnlvkvygss graavnglsl dfyegqitsf lghngagktt tmsiltgllp ptsgtayvlg
      961 wdicsdidsi rksmgmcpqh nvlfdiltve ehvwfygrlk glserqvqee meqllqdtgl
     1021 phkrreqtrn lsggmqrkls vaiafvggsr vvildeptag vdpfsrrsiw elllkyrkgr
     1081 tiilsthymd eaellgdrta iisqgrlccc gsplflkarl gtgyhltlvk rdrsgtggnt
     1141 gtvpgvtkkd gsdsehssdt glgsergsda savdvaqlsa liqklvpgsr lvedighevl
     1201 fvlpysgard gafgelfrel darlgelgvs sygisdttle eiflkvaedt aldtdttgtm
     1261 kgaapgemgd gdvadgemae epretdllrg aagqacgrvr gwaltcrqlr alftkrmlha
     1321 rrstrgffaq ivlpavfvcv allfslivpp fgkypplqlq pwmygqqftf fsndapgdpd
     1381 tvrlleafla epgfgtkcmk eegkaaglcp pashpdgfst psappsllev lqrgnwtrak
     1441 psppcqcsgp gahrmlpecp egagglpppq vqrgtgdvlq nltgrnisdy lvktypqiir
     1501 qelrnkkwvn eqryggfslg agssqalpsa aevdqavlel rvllnitlgs psdrllanls
     1561 rfiegldarr nikvwfnnkg whamvsflnv asngllrarl ppgtdparfg itatnhplnl
     1621 tkeqlseaal matsvdvlvs icvifamsfv pasfvvflie ervskakhlq fvsgmkpity
     1681 wlgnfawdmc nylvpallvi liflcfqqes yvssanlpsl vlllllygws itplmypasf
     1741 lfsipstayv altcinlfig ingsvatfvl elfvdqnlnd inrvlkkvfl ifphfclgrg
     1801 lidmvknqam adaferfgdk rfvsplswdl agknmfamai egivfflftl llqyhrfflr
     1861 lgpralelps lgdedqdvar erarvgsipp hghllllkdl tkvyrrrkap avdrlcvaip
     1921 pgecfgllgv ngagktstfk mltgdtevtl geawlkghsv ltdlqsvhqh mgycpqfdai
     1981 tdlltgrehl efysrlrgip eeetprvaqw gitalglgph adrpagkysg gnkrklstai
     2041 allgcppvvf ldepttgmdp qarrflweri lgvirdgrsv vltshsmeec ealctrmaim
     2101 vngrfrclgs vqhlknrfgd gytvvvragg pgpaavqall qqhfpgivlr eqhggllqyh
     2161 lparvtslat vfsllaahrg pchiedysvs qttldqvfmh faqeqsdgda gevtapgqda
     2221 apgpgrrlsr fleddsyqes av
//
LOCUS       XP_041338448             271 aa            linear   VRT 06-MAY-2021
DEFINITION  vesicle transport protein USE1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338448
VERSION     XP_041338448.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482514.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="vesicle transport protein USE1"
                     /calculated_mol_wt=30498
     Region          17..267
                     /region_name="Use1"
                     /note="Membrane fusion protein Use1; pfam09753"
                     /db_xref="CDD:462882"
     CDS             1..271
                     /gene="USE1"
                     /coded_by="XM_041482514.1:1..816"
                     /db_xref="GeneID:121361623"
ORIGIN      
        1 mapgaegssg aamaatrlel nlmrllsrce alaaerrdpe ewrlekyvaa ledmlrelkk
       61 qsskpapell neysrkvdfl kglleaeklp sstekalanq flapgrtptt akertpatkt
      121 vhlqtkarct gqmrsellgt dalaaddsee lnirkrkglt sdekqsavel davlqhhqdm
      181 qeklaeemls larslknntl aaqnvikqdn qtlshslrma dqnfeklkde sdrleqhakk
      241 svnwllwiml ivvcfifism ilfirifpkl k
//
LOCUS       XP_041338465             998 aa            linear   VRT 06-MAY-2021
DEFINITION  F-BAR domain only protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338465
VERSION     XP_041338465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..998
                     /product="F-BAR domain only protein 1"
                     /calculated_mol_wt=105857
     Region          1..248
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(1,3..4,7..8,10..11,21..22,24..25,28..29,31..32,35,
                     59,62..63,175,178..179,181,183,186..187,189..190,193..194,
                     197..198,200..201,204..205,207..208)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          <361..670
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          732..997
                     /region_name="AP_MHD_Cterm"
                     /note="C-terminal domain of adaptor protein (AP) complexes
                     medium mu subunits and its homologs (MHD); cl10970"
                     /db_xref="CDD:472082"
     CDS             1..998
                     /gene="FCHO1"
                     /coded_by="XM_041482531.1:51..3047"
                     /db_xref="GeneID:121361627"
ORIGIN      
        1 mkhgqistke ladfvreraa ieenyakamv klskmatngt qlgtfaplwe vfrissdkla
       61 lchlelmkkl hdlikeisry geeqgrvhkk skeevsgtle avqllhgvaq llpkskesyh
      121 skcqeyerlr kegtsqkeid kaelksrkag ealrravdky naaradfeqr mldsamrfqe
      181 veeahlrhmk gligsyshsv edthvqigqv heefkqnven igtemllrrf aeskgtgrer
      241 pgaldfdeyr lapaqegpkr srskafripg lsrkererda vespdndlgc pevdedgftv
      301 rpdsarseae npgcsssdsd ydedeprkfy vhikpvqpre apgsaeatve qlkatvgnli
      361 lapgvggtvr rqasrhtasl tpacsdtdpe gtlaagdstg rglpaaqvns gpgkppqdtp
      421 psaalfgppl esaleaeefp aprsyvltss sspfsssspe nvedsgldsp shpapgpspd
      481 srpwtpqpgt pqspgpkaep ppassawtpr prspsgrlpe ppnfavfsgp gaeglwgdag
      541 vaprgrsrcl sgpapreaps pdpfgdppaw grprspggeq ppltrpssns asssssspap
      601 psggesssps pwgcpgpgar lgeggtagtp plpsepgeww gsgprvpqnv tatapssapn
      661 ilnpappaas ksapitpnss rslspspsws cgpshsapas lgergffava ppalglsrgp
      721 spvvlgsqda lpvataftey vhayfkgrda dsclvkvtge ltmsfpagiv rvfggpaapp
      781 vlsfrllnaa aieqflpnae llysdpsqsd pstkdfwlnm aaltghlqkq aeqspaasyy
      841 nvpllkyqfs rlgpgsaplr lcvrwdcapg atrvsveygy naaalalpvp lgnvhvllpv
      901 eepltnlrlq paaswnleek rllwklldvp gapgqggcgr lsasweplgg pskpspvaaq
      961 fssegstlsg vevelagagy rmslvkkrfa tgiylags
//
LOCUS       XP_041338479             724 aa            linear   VRT 06-MAY-2021
DEFINITION  PWWP domain-containing DNA repair factor 3A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338479
VERSION     XP_041338479.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482545.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..724
                     /product="PWWP domain-containing DNA repair factor 3A"
                     /calculated_mol_wt=80128
     Region          109..>403
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          419..508
                     /region_name="PWWP_MUM1-like"
                     /note="PWWP domain found in mutated melanoma-associated
                     antigen 1 (MUM-1) and similar proteins; cd06080"
                     /db_xref="CDD:438967"
     Site            order(432,435,453)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438967"
     Site            433..436
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438967"
     CDS             1..724
                     /gene="PWWP3A"
                     /coded_by="XM_041482545.1:578..2752"
                     /db_xref="GeneID:121361635"
ORIGIN      
        1 mtdqefilck wkrrlwpakv lckpgvaggs pvatttrmgl kaeilglekq vsvssanvvp
       61 lteerikdia stleqkksms eaveelqyrc slkialdilh qtnssnqmpp aegpnpkfsr
      121 ekcapptpsq sfllrsrfkk sepeaakrkr kpqnncglkd dpkargqggp vapggsgkap
      181 gsgtnparcg arnssvapap dshncknpep kssprqrkiq pkmgngvsfk peagrsqqgr
      241 krcrddsppd qaqvapeegs psvssksgtv epsrktgtqp gktfldssce tasdeleksi
      301 sseseslakq ldgrreaegg khldgagvas gtdrkcrnhp gsspgpsgaf pqpqeeenqd
      361 pshlagnkap dseedeglep sgmssrrvss eslpplspla deeeedfpsv lshrepkffe
      421 egmlvwcklr rypywpavvk tvkrkhrrac vlfidgttne kkkgfsvslk slkhfdceek
      481 qnlieraken ysreiewclq lirdyrirvg chsftgsfle yfaadisypv rkegyqsvvq
      541 mafpntgeee agqsssdtsp qkpprkllpd rtraardren kklvefivkt kgaeehllgi
      601 lksgkqsrwl kkflnssrym tcvetylede eqldlvagyl kevyremdtk nlhqilgdgi
      661 rfisdvllpe aiicaiaavd didyekaeek yikgppvskr erelfdeqil gskklktepe
      721 paes
//
LOCUS       XP_041338490             313 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc transporter ZIP3 [Pyrgilauda ruficollis].
ACCESSION   XP_041338490
VERSION     XP_041338490.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482556.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="zinc transporter ZIP3"
                     /calculated_mol_wt=33360
     Region          4..308
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; pfam02535"
                     /db_xref="CDD:396884"
     CDS             1..313
                     /gene="SLC39A3"
                     /coded_by="XM_041482556.1:722..1663"
                     /db_xref="GeneID:121361642"
ORIGIN      
        1 mrivvakvlc llgicvlvla gallpvrlme adpekaqrsr rllalwnsfg ggvflatcfn
       61 allpavrgkl devlrqnnvt tdypvaetim mlgfflsvfv dqlfltfqke kpsfidletf
      121 nagsdagsds eyespfmasp rgralygehg lhshglhlpe larcgprrll glvfalcths
      181 ifeglalglq edggrvvslf lgvavhetlv avalgismak aslplrdaak lavavclmip
      241 lgigvgmgie ssrnaagsia slllqgiagg tflfvtffei lakeledksh rllkvlclvl
      301 gyaalaglvl vpw
//
LOCUS       XP_041338503             232 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal membrane protein 11C isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338503
VERSION     XP_041338503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482569.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..232
                     /product="peroxisomal membrane protein 11C isoform X1"
                     /calculated_mol_wt=24839
     Region          9..223
                     /region_name="PEX11"
                     /note="Peroxisomal biogenesis factor 11 (PEX11);
                     pfam05648"
                     /db_xref="CDD:398979"
     CDS             1..232
                     /gene="PEX11G"
                     /coded_by="XM_041482569.1:403..1101"
                     /db_xref="GeneID:121361649"
ORIGIN      
        1 maagalwglv aalethrgrd ralralsygc qlagaalpgp gglpggllaa saqlsscrta
       61 lrlfddlaml rhscsyglgp egedalvrgl svlcnaanql yypcehlawa advgivraas
      121 qkwwtrstal wgcalllgil rslrilfqlr rklsqhkcst spqrqqqlra qvkaellsil
      181 mdtadlsnai hwlppgflwa grfppwlvgl lgtissligi yqasrgknse aa
//
LOCUS       XP_041338511             231 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal membrane protein 11C isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338511
VERSION     XP_041338511.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482577.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..231
                     /product="peroxisomal membrane protein 11C isoform X2"
                     /calculated_mol_wt=24752
     Region          9..222
                     /region_name="PEX11"
                     /note="Peroxisomal biogenesis factor 11 (PEX11);
                     pfam05648"
                     /db_xref="CDD:398979"
     CDS             1..231
                     /gene="PEX11G"
                     /coded_by="XM_041482577.1:393..1088"
                     /db_xref="GeneID:121361649"
ORIGIN      
        1 maagalwglv aalethrgrd ralralsygc qlagaalpgp gglpggllaa saqlsscrta
       61 lrlfddlaml rhscsyglgp egedalvrgl svlcnaanql yypcehlawa advgivraas
      121 qkwwtrstal wgcalllgil rslrilfqlr rklsqhkcts pqrqqqlraq vkaellsilm
      181 dtadlsnaih wlppgflwag rfppwlvgll gtissligiy qasrgknsea a
//
LOCUS       XP_041338520             205 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal membrane protein 11C isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338520
VERSION     XP_041338520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="peroxisomal membrane protein 11C isoform X3"
                     /calculated_mol_wt=22052
     Region          9..193
                     /region_name="PEX11"
                     /note="Peroxisomal biogenesis factor 11 (PEX11);
                     pfam05648"
                     /db_xref="CDD:398979"
     CDS             1..205
                     /gene="PEX11G"
                     /coded_by="XM_041482586.1:422..1039"
                     /db_xref="GeneID:121361649"
ORIGIN      
        1 maagalwglv aalethrgrd ralralsygc qlagaalpgp gglpggllaa saqlsscrta
       61 lrlfddlaml rhscsyglgp egedalvrgl svlcnaanql yypcehlawa advgivraas
      121 qkwwtrstal wgcalllgil rslrilfqlr rklsqhkcst spqrqqqlra qvkaellsil
      181 mdtadlsnai hwlppgflwa grfpp
//
LOCUS       XP_041338530             173 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal membrane protein 11C isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338530
VERSION     XP_041338530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..173
                     /product="peroxisomal membrane protein 11C isoform X4"
                     /calculated_mol_wt=18911
     Region          <9..164
                     /region_name="PEX11"
                     /note="Peroxisomal biogenesis factor 11 (PEX11);
                     pfam05648"
                     /db_xref="CDD:398979"
     CDS             1..173
                     /gene="PEX11G"
                     /coded_by="XM_041482596.1:410..931"
                     /db_xref="GeneID:121361649"
ORIGIN      
        1 maagalwglv aalethrgrd ragedalvrg lsvlcnaanq lyypcehlaw aadvgivraa
       61 sqkwwtrsta lwgcalllgi lrslrilfql rrklsqhkcs tspqrqqqlr aqvkaellsi
      121 lmdtadlsna ihwlppgflw agrfppwlvg llgtisslig iyqasrgkns eaa
//
LOCUS       XP_041338542             381 aa            linear   VRT 06-MAY-2021
DEFINITION  proteinase-activated receptor 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041338542
VERSION     XP_041338542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="proteinase-activated receptor 4"
                     /calculated_mol_wt=41564
     Region          78..351
                     /region_name="7tmA_PAR4"
                     /note="protease-activated receptor 4, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15372"
                     /db_xref="CDD:320494"
     Region          78..105
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320494"
     Region          111..136
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320494"
     Site            order(132,135..136,142,149..154,156..157,160,205,207..211,
                     228..230,241,244..246,248..250,252..253,296,299..300,
                     302..303,306,318..319,321..323,326,329..330)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320494"
     Region          149..179
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320494"
     Region          191..213
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320494"
     Region          241..270
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320494"
     Region          276..306
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320494"
     Region          319..344
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320494"
     CDS             1..381
                     /gene="F2RL3"
                     /coded_by="XM_041482608.1:65..1210"
                     /db_xref="GeneID:121361671"
ORIGIN      
        1 mgtlgnrqll lccalwglcl asdyddysqn stseqastpe vtpcpraipg dqatvnnvty
       61 llipeatraq lgsaitvrli pclyslvfll glpanalalw vlatraerla stvflmnlaa
      121 adlllvsvlp fkisyyflgn hwpfgeglcr lttalfygnm hcsvllltci svdrylavah
      181 pfssrafrtp tlaagtcagv wlcsaaltlp ltlqqqsypl lgagltlchd vlprheddgf
      241 yfyyfvalva cafllpllll alssgavlrv llrgggrygh aakltalvvv tlvvfyapsn
      301 vllllhyssp csklhgrlyl symvslalst fnscadpfvy yyvsedfrek vrrrvfsgsk
      361 ktttslktsk etlprskhsl v
//
LOCUS       XP_041338555            1850 aa            linear   VRT 06-MAY-2021
DEFINITION  C3 and PZP-like alpha-2-macroglobulin domain-containing protein 8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338555
VERSION     XP_041338555.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482621.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1850
                     /product="C3 and PZP-like alpha-2-macroglobulin
                     domain-containing protein 8"
                     /calculated_mol_wt=205602
     Region          <123..>888
                     /region_name="YfaS"
                     /note="Uncharacterized conserved protein YfaS,
                     alpha-2-macroglobulin family [General function prediction
                     only]; COG2373"
                     /db_xref="CDD:441940"
     Region          454..625
                     /region_name="A2M_BRD"
                     /note="Alpha-2-macroglobulin bait region domain;
                     pfam07703"
                     /db_xref="CDD:462235"
     Region          749..839
                     /region_name="A2M"
                     /note="Alpha-2-macroglobulin family; pfam00207"
                     /db_xref="CDD:459711"
     Region          986..1088
                     /region_name="Methyltransf_FA"
                     /note="Farnesoic acid 0-methyl transferase; pfam12248"
                     /db_xref="CDD:463505"
     Region          1143..1431
                     /region_name="A2M_2"
                     /note="Proteins similar to alpha2-macroglobulin (alpha
                     (2)-M). This group also contains the pregnancy zone
                     protein (PZP). Alpha(2)-M and PZP are broadly specific
                     proteinase inhibitors. Alpha (2)-M is a major carrier
                     protein in serum. The structural thioester...; cd02897"
                     /db_xref="CDD:239227"
     Site            order(1146,1148..1149,1152,1192,1202,1205,1257,1259..1260,
                     1415)
                     /site_type="other"
                     /note="surface patch"
                     /db_xref="CDD:239227"
     Site            1146..1149
                     /site_type="active"
                     /note="thioester region [active]"
                     /db_xref="CDD:239227"
     Site            order(1246,1250,1252,1260)
                     /site_type="other"
                     /note="specificity defining residues"
                     /db_xref="CDD:239227"
     Region          1577..1670
                     /region_name="A2M_recep"
                     /note="A-macroglobulin receptor binding domain; pfam07677"
                     /db_xref="CDD:462226"
     Region          1723..1767
                     /region_name="KAZAL"
                     /note="Kazal type serine protease inhibitors; smart00280"
                     /db_xref="CDD:197624"
     CDS             1..1850
                     /gene="CPAMD8"
                     /coded_by="XM_041482621.1:70..5622"
                     /db_xref="GeneID:121361680"
ORIGIN      
        1 msgceprrar alllllalcs lsaaqprqrq gyliaapsvf rsgveeaisv tifnsvkett
       61 vqiqlvvkge tvsrshgtvl ekgtiklkvp sglrgqahlk vwgnrhlaee gyifhnyttv
      121 tidskgssvf iqtdkpvykp kqkvlinlfm vtsdlrpvnd rieayvvdpr gsrmiewknl
      181 kpfccgivnm tfplsdqpvf gewlifaemq ghtynksfev qkyvlpkfel lidppryird
      241 lslcekgtvh arytfgkpvt gklivnmtin gvgyyrhevg hpvlkttqmd gsavfevcvr
      301 dmmpadvpeh frgtvniwat vissdgskqv tfddstpvqk qlidikyskd trkqfkpglp
      361 ykgkvevtyp dgspadrvti rikaeltpkd nvytselvsr nglvefeips iptaaqyvwl
      421 etkvtaidgk psgdqylpny lsisswysps kchiqlqapd kpfqvgeeaw iavkstcpcn
      481 ftlhyevasr gnivlsglqp snvtqqrskr attplekntd ltrfpgaapp stpaaevevc
      541 vtflrfsvvh smaplgrllv yyvrengegv tdslqftvts sfenqvaval sanetrpgdv
      601 vnikvraakg scvcmatvdk svyllktgfq ltasqvfqel aeydvsdafg apkeeghfww
      661 pgmssrrrrr ssvfpwhwdi tkdarfafte tglvvmtdiv slnhrqnggm ytdeavpafq
      721 phtgtlvatm hskippraek rkrtffpetw iwhclnvsss geaqlqvevp dsittwitea
      781 valseekglg iasqtelktf kpffidftlp yhvirgeqtk ipltvynylp lcaevhvkis
      841 vpkgikfvgh pgkhhltrkk cvapgeakpt sivlafnelg lsnitakafa yggtnccqeg
      901 mqslkngkhs edsyldkrsp vgvdyvrssv iiepeglsre ytysvffcpn ekihistpnk
      961 yeyqylqkpa qmrhfdlavk ahndahlals sgphdmaema eiviggqqnt ktwistskmg
     1021 epvasrdtpg ilswdefrsf wiswkngiiq vghgtrvlne siivewtvpk qlevkyigfs
     1081 tgwgsmgefk iwrkeetden hneaftlgvp hniipgsera tasiigdvmg ptlnnldnll
     1141 rlpfgcgeqn mihfapnvfv lkylqktkql sheveveatd ylvqgyqrql tykrqdgsys
     1201 afgerdssgs mwltafvlks faqsrgfifi dpkeltaakd wiiqhqkedg sfpamgriln
     1261 kdiqggihgk isltayvvas lletgvtsee ertavdkakh flesnlysae dpyttalsay
     1321 altllhspsa aatlrrmnsm aitqdgfthw sltgtlvtde dtfmgfndgl sqsvvsaeve
     1381 mtsyalltyt llgdvasalp vvkwlsqqrn alggfsstqd tcvalqalae yailsyvggv
     1441 nltislastn ldyqetfeln kmnkkvlqta vipsiptglf vsakgegccl mqidvtynvp
     1501 dpiakpafql lvnlkepkae qplpapaplr sgsaaerrpg alhrdralgd dedpasdqdh
     1561 reykviletc trwlhsgssn mavlevplfs gfradiesle qllmnkqigl kryevdgrkv
     1621 lfyfdeipsq cmtcvkfqaf rehivgktap vpikvydyye pafeatrfyn vsensplare
     1681 lcdgptcnev essasqwvgf vhsgpcnnif gcledeyfeq clcsrdcgyd gepvcgsdgh
     1741 iypnhcqmev ascrnntrie qmpmsqcsas knlpeereth shtaeqpsap qtpaaeegpp
     1801 lhtdlsyysy eydpdafave gdvfevvael stastfregd ssqaeatpae
//
LOCUS       XP_041338571             312 aa            linear   VRT 06-MAY-2021
DEFINITION  small glutamine-rich tetratricopeptide repeat-containing protein
            alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041338571
VERSION     XP_041338571.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482637.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="small glutamine-rich tetratricopeptide
                     repeat-containing protein alpha"
                     /calculated_mol_wt=33713
     Region          5..64
                     /region_name="SGTA_dimer"
                     /note="Homodimerization domain of SGTA; pfam16546"
                     /db_xref="CDD:465168"
     Region          90..118
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(91,94..95,98..99,101,125,128..129,132..133,135..136,
                     159,162..163,166..167,170)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          97..>207
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          123..153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          158..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..312
                     /gene="SGTA"
                     /coded_by="XM_041482637.1:218..1156"
                     /db_xref="GeneID:121361682"
ORIGIN      
        1 madqkrlafs iiqflhtqlq ngsmspdaqe slevaiqcle tafgvsmedq slavsqtlpe
       61 ifeavagkel ehsrtnsepv tpseddvaea erlktegndq mkaenfeaav sfygkaieln
      121 panavyfcnr aaaysklgny agavrdcera igidpnyska ygrmglalss lnkhteavvy
      181 ykkaleldpd netyksnlki aeqkmketps ptggpggfdl agllnnpgfm smasnlmnnp
      241 qvqqlmsgmi sgghnamgaa gsspstndla sliqagqqfa qqmqqqnpel ieqlrsqirs
      301 rtpsasneeq qe
//
LOCUS       XP_041338580             312 aa            linear   VRT 06-MAY-2021
DEFINITION  small glutamine-rich tetratricopeptide repeat-containing protein
            alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041338580
VERSION     XP_041338580.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482646.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="small glutamine-rich tetratricopeptide
                     repeat-containing protein alpha"
                     /calculated_mol_wt=33713
     Region          5..64
                     /region_name="SGTA_dimer"
                     /note="Homodimerization domain of SGTA; pfam16546"
                     /db_xref="CDD:465168"
     Region          90..118
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(91,94..95,98..99,101,125,128..129,132..133,135..136,
                     159,162..163,166..167,170)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          97..>207
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          123..153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          158..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..312
                     /gene="SGTA"
                     /coded_by="XM_041482646.1:129..1067"
                     /db_xref="GeneID:121361682"
ORIGIN      
        1 madqkrlafs iiqflhtqlq ngsmspdaqe slevaiqcle tafgvsmedq slavsqtlpe
       61 ifeavagkel ehsrtnsepv tpseddvaea erlktegndq mkaenfeaav sfygkaieln
      121 panavyfcnr aaaysklgny agavrdcera igidpnyska ygrmglalss lnkhteavvy
      181 ykkaleldpd netyksnlki aeqkmketps ptggpggfdl agllnnpgfm smasnlmnnp
      241 qvqqlmsgmi sgghnamgaa gsspstndla sliqagqqfa qqmqqqnpel ieqlrsqirs
      301 rtpsasneeq qe
//
LOCUS       XP_041338588             312 aa            linear   VRT 06-MAY-2021
DEFINITION  small glutamine-rich tetratricopeptide repeat-containing protein
            alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041338588
VERSION     XP_041338588.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482654.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="small glutamine-rich tetratricopeptide
                     repeat-containing protein alpha"
                     /calculated_mol_wt=33713
     Region          5..64
                     /region_name="SGTA_dimer"
                     /note="Homodimerization domain of SGTA; pfam16546"
                     /db_xref="CDD:465168"
     Region          90..118
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(91,94..95,98..99,101,125,128..129,132..133,135..136,
                     159,162..163,166..167,170)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          97..>207
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          123..153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          158..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..312
                     /gene="SGTA"
                     /coded_by="XM_041482654.1:103..1041"
                     /db_xref="GeneID:121361682"
ORIGIN      
        1 madqkrlafs iiqflhtqlq ngsmspdaqe slevaiqcle tafgvsmedq slavsqtlpe
       61 ifeavagkel ehsrtnsepv tpseddvaea erlktegndq mkaenfeaav sfygkaieln
      121 panavyfcnr aaaysklgny agavrdcera igidpnyska ygrmglalss lnkhteavvy
      181 ykkaleldpd netyksnlki aeqkmketps ptggpggfdl agllnnpgfm smasnlmnnp
      241 qvqqlmsgmi sgghnamgaa gsspstndla sliqagqqfa qqmqqqnpel ieqlrsqirs
      301 rtpsasneeq qe
//
LOCUS       XP_041338597             312 aa            linear   VRT 06-MAY-2021
DEFINITION  small glutamine-rich tetratricopeptide repeat-containing protein
            alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041338597
VERSION     XP_041338597.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482663.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="small glutamine-rich tetratricopeptide
                     repeat-containing protein alpha"
                     /calculated_mol_wt=33713
     Region          5..64
                     /region_name="SGTA_dimer"
                     /note="Homodimerization domain of SGTA; pfam16546"
                     /db_xref="CDD:465168"
     Region          90..118
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(91,94..95,98..99,101,125,128..129,132..133,135..136,
                     159,162..163,166..167,170)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          97..>207
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          123..153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          158..186
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..312
                     /gene="SGTA"
                     /coded_by="XM_041482663.1:204..1142"
                     /db_xref="GeneID:121361682"
ORIGIN      
        1 madqkrlafs iiqflhtqlq ngsmspdaqe slevaiqcle tafgvsmedq slavsqtlpe
       61 ifeavagkel ehsrtnsepv tpseddvaea erlktegndq mkaenfeaav sfygkaieln
      121 panavyfcnr aaaysklgny agavrdcera igidpnyska ygrmglalss lnkhteavvy
      181 ykkaleldpd netyksnlki aeqkmketps ptggpggfdl agllnnpgfm smasnlmnnp
      241 qvqqlmsgmi sgghnamgaa gsspstndla sliqagqqfa qqmqqqnpel ieqlrsqirs
      301 rtpsasneeq qe
//
LOCUS       XP_041338610             155 aa            linear   VRT 06-MAY-2021
DEFINITION  growth arrest and DNA damage-inducible protein GADD45 beta
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338610
VERSION     XP_041338610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482676.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="growth arrest and DNA damage-inducible protein
                     GADD45 beta"
                     /calculated_mol_wt=17116
     Region          19..103
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     pfam01248"
                     /db_xref="CDD:426153"
     CDS             1..155
                     /gene="GADD45B"
                     /coded_by="XM_041482676.1:155..622"
                     /db_xref="GeneID:121361701"
ORIGIN      
        1 mtleelvpcd sskmqavsea vervlvaaqr qdrltvgvye saklmnvdpd svvlcvlatd
       61 eedegdialq ihftliqafc cdndihilrv sgmqrlaail gepeadsepr dlhcllvtns
      121 htdawksqgl aevasycaes rdrnqwvpfv clqer
//
LOCUS       XP_041338623             420 aa            linear   VRT 06-MAY-2021
DEFINITION  C2 calcium-dependent domain-containing protein 4C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338623
VERSION     XP_041338623.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482689.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="C2 calcium-dependent domain-containing protein
                     4C"
                     /calculated_mol_wt=45118
     Region          320..418
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     CDS             1..420
                     /gene="C2CD4C"
                     /coded_by="XM_041482689.1:48..1310"
                     /db_xref="GeneID:121361708"
ORIGIN      
        1 mwllerlrgv aenggsrgsg tdessrgsry snvltpdkip dffippklsa apaeaegsev
       61 pagaalgasv seqdlakrkp prsprpssrs rsrttgrhii qietaedwte gscgtnvdpq
      121 aqtamslpyv pkaqtsygfa tlmesphtrr keslfhsehs slcpspvtsp saqrkaklng
      181 esgrrtpadl gaalmhpgry fsggesdtcs saesspfgsp llsrsvsllk lfsqesqskv
      241 iklkhsvarn sslstddssa dtspsaqrra rsapagtqpp tallpldlpa grdrdrehsl
      301 rlsrggslrl aaeydpsnar lrvrlvsaed lydalvdlrs inccvslcln pgklqkqrst
      361 ivknsrnpvf nedfffdglg pgharkmslk lkvvnkgssl krdtllgeke lpltallscl
//
LOCUS       XP_041338632             420 aa            linear   VRT 06-MAY-2021
DEFINITION  C2 calcium-dependent domain-containing protein 4C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338632
VERSION     XP_041338632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="C2 calcium-dependent domain-containing protein
                     4C"
                     /calculated_mol_wt=45118
     Region          320..418
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     CDS             1..420
                     /gene="C2CD4C"
                     /coded_by="XM_041482698.1:48..1310"
                     /db_xref="GeneID:121361708"
ORIGIN      
        1 mwllerlrgv aenggsrgsg tdessrgsry snvltpdkip dffippklsa apaeaegsev
       61 pagaalgasv seqdlakrkp prsprpssrs rsrttgrhii qietaedwte gscgtnvdpq
      121 aqtamslpyv pkaqtsygfa tlmesphtrr keslfhsehs slcpspvtsp saqrkaklng
      181 esgrrtpadl gaalmhpgry fsggesdtcs saesspfgsp llsrsvsllk lfsqesqskv
      241 iklkhsvarn sslstddssa dtspsaqrra rsapagtqpp tallpldlpa grdrdrehsl
      301 rlsrggslrl aaeydpsnar lrvrlvsaed lydalvdlrs inccvslcln pgklqkqrst
      361 ivknsrnpvf nedfffdglg pgharkmslk lkvvnkgssl krdtllgeke lpltallscl
//
LOCUS       XP_041338644             246 aa            linear   VRT 06-MAY-2021
DEFINITION  follistatin-related protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041338644
VERSION     XP_041338644.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482710.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="follistatin-related protein 3"
                     /calculated_mol_wt=26348
     Region          106..152
                     /region_name="KAZAL"
                     /note="Kazal type serine protease inhibitors; smart00280"
                     /db_xref="CDD:197624"
     Region          196..228
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     CDS             1..246
                     /gene="FSTL3"
                     /coded_by="XM_041482710.1:74..814"
                     /db_xref="GeneID:121361721"
ORIGIN      
        1 mplrlalcll alcspaaahg gicwlqqgke akctmilktg vtweeccang nvdvawsnyt
       61 ypgnkisllg flglvtchpc kescegvvcg pdkvckmkhg rpqcacapdc sslprklqvc
      121 gsdgytyrde cdlltakcrd hpdlevmyqg kckkscssvv cpgthtcvvd qtgsahcvmc
      181 rtapcpepts ldhalcgnnn vtypsachlr ratchrgrsi gvrhygscsa aakfsaetds
      241 veenyv
//
LOCUS       XP_041338656             432 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 18 [Pyrgilauda ruficollis].
ACCESSION   XP_041338656
VERSION     XP_041338656.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482722.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="WD repeat-containing protein 18"
                     /calculated_mol_wt=47350
     Region          <22..331
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          84..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          124..169
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          176..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          218..266
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          272..308
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          383..430
                     /region_name="WD40_alt"
                     /note="Alternative WD40 repeat motif; pfam14077"
                     /db_xref="CDD:433698"
     CDS             1..432
                     /gene="WDR18"
                     /coded_by="XM_041482722.1:26..1324"
                     /db_xref="GeneID:121361730"
ORIGIN      
        1 maapmevalv sdaagplcnc svwelhsgsa lpgyrggnsg prglallgge hllgaqlgks
       61 yinvwelqrk dqlqqkiicp gpvtcltasp nglyilagva esiylwevsn gnllailnrh
      121 yqdltclcft ddsshflsga kdclalvwnl ynvlqaepsq ipdprhvwsr hslpitdlcc
      181 gfggplaraa tasldqtakl weissgelll svlfdvgima vtldlseyhm fcggmdgsif
      241 qvdlcawpvq rdrtfqtere ngkvfkghrn qvtclsvstd gslllsgshd etvrlwdiqs
      301 kqclktmnhk gpvtnafivl apanmfnpdg kpsvplpkfs rhlhgtessd epgaegvtlr
      361 lglhqqepgq sylekaermy sqmystrekn lvgdqehlti qvseleeevs nlrkinkdlf
      421 dfstriitkp ak
//
LOCUS       XP_041338666             284 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121361739 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338666
VERSION     XP_041338666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482732.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="uncharacterized protein LOC121361739 isoform X1"
                     /calculated_mol_wt=29388
     Region          223..283
                     /region_name="CART_CTD-like"
                     /note="C-terminal domain of cocaine-and
                     amphetamine-regulated transcript protein (CART) and
                     similar proteins; cl05722"
                     /db_xref="CDD:471302"
     CDS             1..284
                     /gene="LOC121361739"
                     /coded_by="XM_041482732.1:1..855"
                     /db_xref="GeneID:121361739"
ORIGIN      
        1 msvllcvprl slclsprlfp vcpfcslsvp lsvpfpsplp spvcplgcls vcplgclsvc
       61 ppvrsrcrrs cpaasprlca vraapgaagp spvfvcsrnw qrlrpggvtg gslpgpgadv
      121 rpwplaggpg vprdavspph pvtvpdfggt qaprvrhraf gggrvgdkte pgtsrsigga
      181 agtgnmesar lcllcllgsg lillgtpepa aeptlslpgh greepelaep lralldepal
      241 ekrlswvpwc eprepcavrr garfgklcsc prgsscnlli lkcs
//
LOCUS       XP_041338674             262 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121361739 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338674
VERSION     XP_041338674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="uncharacterized protein LOC121361739 isoform X2"
                     /calculated_mol_wt=26816
     Region          <227..261
                     /region_name="CART_CTD-like"
                     /note="C-terminal domain of cocaine-and
                     amphetamine-regulated transcript protein (CART) and
                     similar proteins; cl05722"
                     /db_xref="CDD:471302"
     CDS             1..262
                     /gene="LOC121361739"
                     /coded_by="XM_041482740.1:1..789"
                     /db_xref="GeneID:121361739"
ORIGIN      
        1 msvllcvprl slclsprlfp vcpfcslsvp lsvpfpsplp spvcplgcls vcplgclsvc
       61 ppvrsrcrrs cpaasprlca vraapgaagp spvfvcsrnw qrlrpggvtg gslpgpgadv
      121 rpwplaggpg vprdavspph pvtvpdfggt qaprvrhraf gggrvgdkte pgtsrsigga
      181 agtgnmesar lcllcllgsg lillgtpepa aeptlslpgh greepelcep repcavrrga
      241 rfgklcscpr gsscnllilk cs
//
LOCUS       XP_041338685             210 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerases I, II, and III subunit RPABC1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338685
VERSION     XP_041338685.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482751.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="DNA-directed RNA polymerases I, II, and III
                     subunit RPABC1"
                     /calculated_mol_wt=24512
     Region          1..209
                     /region_name="PLN03111"
                     /note="DNA-directed RNA polymerase II subunit family
                     protein; Provisional"
                     /db_xref="CDD:215582"
     CDS             1..210
                     /gene="POLR2E"
                     /coded_by="XM_041482751.1:98..730"
                     /db_xref="GeneID:121361756"
ORIGIN      
        1 mddeeetyrl wkirktimql chdrgylvtq deldqtleef kaqfgdkpse grprrtdltv
       61 lvahnddptd qmfvffpeep kvgiktikmy cqrmqeenit ralivvqqgm tpsakqslvd
      121 mapkyileqf lqqellinit ehelvpehvv mtkeevtell aryklrenql priqagdpva
      181 ryfgikrgqv vkiirpseta gryityrlvq
//
LOCUS       XP_041338695             210 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerases I, II, and III subunit RPABC1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338695
VERSION     XP_041338695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="DNA-directed RNA polymerases I, II, and III
                     subunit RPABC1"
                     /calculated_mol_wt=24512
     Region          1..209
                     /region_name="PLN03111"
                     /note="DNA-directed RNA polymerase II subunit family
                     protein; Provisional"
                     /db_xref="CDD:215582"
     CDS             1..210
                     /gene="POLR2E"
                     /coded_by="XM_041482761.1:98..730"
                     /db_xref="GeneID:121361756"
ORIGIN      
        1 mddeeetyrl wkirktimql chdrgylvtq deldqtleef kaqfgdkpse grprrtdltv
       61 lvahnddptd qmfvffpeep kvgiktikmy cqrmqeenit ralivvqqgm tpsakqslvd
      121 mapkyileqf lqqellinit ehelvpehvv mtkeevtell aryklrenql priqagdpva
      181 ryfgikrgqv vkiirpseta gryityrlvq
//
LOCUS       XP_041338708             441 aa            linear   VRT 06-MAY-2021
DEFINITION  SHC-transforming protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338708
VERSION     XP_041338708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="SHC-transforming protein 2"
                     /calculated_mol_wt=48862
     Region          1..150
                     /region_name="PTB_Shc"
                     /note="Shc-like phosphotyrosine-binding (PTB) domain;
                     cd01209"
                     /db_xref="CDD:269920"
     Site            order(10..13,18,92..100,112,118,131,134..135,137..138,
                     141..142,145..148,150)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269920"
     Site            order(55,59,82)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269920"
     Region          338..441
                     /region_name="SH2_SHC"
                     /note="Src homology 2 (SH2) domain found in SH2 adaptor
                     protein C (SHC); cd09925"
                     /db_xref="CDD:198179"
     Site            order(353,369,371,376,381,390..392)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198179"
     Site            order(380,391,393,395,400..402,407,413,424..426)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198179"
     CDS             1..441
                     /gene="SHC2"
                     /coded_by="XM_041482774.1:129..1454"
                     /db_xref="GeneID:121361768"
ORIGIN      
        1 mgcievlrsm rsldfntrtq vtreainrly eavpgvkgiw kkkapnkalf silgksnlhf
       61 agmsiavnis vdglnlmipt trqiianhhm qsisfasggd mdttdyvayv akdpinqrac
      121 hileccegla qsvistvgqa felrfkqylh sppkvvvppe ralaaeesaw gedeeaaehd
      181 yynsipgkep ppgglvdsrl rhstalghvr tqpsssvpps qgglaarrdp siqlgppwdl
      241 esqgqpcdgy lqadshtlgp rdyeehmyvn tqsldawepe lvahgaaees pkkdlfdmrp
      301 fedalklhec iaggatsppi edqwpspptr kapiapteeq lrkepwyhgk msrrdaerll
      361 qmdgdflvrd sltnpgqyvl tgmhsgqpkh lllvdpegvv rtkdvlfesi shlishhrqn
      421 eqpivaaese lhlrqvvqrk q
//
LOCUS       XP_041338712             441 aa            linear   VRT 06-MAY-2021
DEFINITION  SHC-transforming protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338712
VERSION     XP_041338712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="SHC-transforming protein 2"
                     /calculated_mol_wt=48862
     Region          1..150
                     /region_name="PTB_Shc"
                     /note="Shc-like phosphotyrosine-binding (PTB) domain;
                     cd01209"
                     /db_xref="CDD:269920"
     Site            order(10..13,18,92..100,112,118,131,134..135,137..138,
                     141..142,145..148,150)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269920"
     Site            order(55,59,82)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269920"
     Region          338..441
                     /region_name="SH2_SHC"
                     /note="Src homology 2 (SH2) domain found in SH2 adaptor
                     protein C (SHC); cd09925"
                     /db_xref="CDD:198179"
     Site            order(353,369,371,376,381,390..392)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198179"
     Site            order(380,391,393,395,400..402,407,413,424..426)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198179"
     CDS             1..441
                     /gene="SHC2"
                     /coded_by="XM_041482778.1:129..1454"
                     /db_xref="GeneID:121361768"
ORIGIN      
        1 mgcievlrsm rsldfntrtq vtreainrly eavpgvkgiw kkkapnkalf silgksnlhf
       61 agmsiavnis vdglnlmipt trqiianhhm qsisfasggd mdttdyvayv akdpinqrac
      121 hileccegla qsvistvgqa felrfkqylh sppkvvvppe ralaaeesaw gedeeaaehd
      181 yynsipgkep ppgglvdsrl rhstalghvr tqpsssvpps qgglaarrdp siqlgppwdl
      241 esqgqpcdgy lqadshtlgp rdyeehmyvn tqsldawepe lvahgaaees pkkdlfdmrp
      301 fedalklhec iaggatsppi edqwpspptr kapiapteeq lrkepwyhgk msrrdaerll
      361 qmdgdflvrd sltnpgqyvl tgmhsgqpkh lllvdpegvv rtkdvlfesi shlishhrqn
      421 eqpivaaese lhlrqvvqrk q
//
LOCUS       XP_041338721             685 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein KIAA1958 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041338721
VERSION     XP_041338721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..685
                     /product="uncharacterized protein KIAA1958 homolog"
                     /calculated_mol_wt=76219
     Region          544..672
                     /region_name="DUF3504"
                     /note="Domain of unknown function (DUF3504); pfam12012"
                     /db_xref="CDD:463430"
     CDS             1..685
                     /gene="LOC121361779"
                     /coded_by="XM_041482787.1:448..2505"
                     /db_xref="GeneID:121361779"
ORIGIN      
        1 msahplsltf satplqsess sdrgcsstss lqvdlsnlvi wahthgtics qipalefmqn
       61 tdhgsndnav lwmcraghay hwhcgksqnr geevteavgd rkrlltsesl aressfeekk
      121 lkltpssfem nqedsgstgs cgrsqgvteq kadiaytrnn epkgsqntrk pktsfsaaeq
      181 hfsmssgilq tskedvesks dkevqiiisd eeqceadeds qgdrisqdvs epsakelqmh
      241 hcqkmalpta pekaafapta kpplarayil qapvsnsedl srniirlass tpagpraets
      301 garsllgsaa pkvclkrlpv psteakaqle sqpsvmffel qataavrqhl qlsplecgis
      361 gtgssghsae ivdedsetsg srqtpccssa fqspeshppa asngdvlkkq ekkksyttvd
      421 ikvfeewlkl hhpsetrkih mlppadldhy lvsffssakk qngkdfsans lslfrcninr
      481 ylqdhnyqys mlrgpefkas qeayklkhwy lfqkkeegwn vvenltdedv enlhkkgils
      541 ntdphgllhl mfinlirgfg anthhqahql ywgqvvlrkt kgeveylewk ddpipgeneg
      601 elslrlfakp edpencpvas ykeyarkrpa dmlednhply lspkslysvw dkvwyskkal
      661 skakidkilk vitrevrggv rktrt
//
LOCUS       XP_041338735             214 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive serine/threonine-protein kinase PLK5-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338735
VERSION     XP_041338735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..214
                     /product="inactive serine/threonine-protein kinase
                     PLK5-like isoform X1"
                     /calculated_mol_wt=23625
     Region          26..>212
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(32..35,38,40,53,55,87,103..106,149,153..154,156,
                     166..167)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271001"
     CDS             1..214
                     /gene="LOC121361786"
                     /coded_by="XM_041482801.1:334..978"
                     /db_xref="GeneID:121361786"
ORIGIN      
        1 mvpgsagaep phpgwylrde gsgalyrrgr llgegafgrc yqvtevtsgr lyaakvipra
       61 rlaapgigdr vererelqch lrhrhivrlh ghfadrghlc lllelcsrgs ladilrargr
      121 ltepelryyl rqllsglqyl hghglvhrdl klsnflvter mrvkigdlgl aqraappgrr
      181 wgalcgtpgy lapevldrrg haapsdiwal gcav
//
LOCUS       XP_041338744             206 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive serine/threonine-protein kinase PLK5-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338744
VERSION     XP_041338744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="inactive serine/threonine-protein kinase
                     PLK5-like isoform X2"
                     /calculated_mol_wt=22742
     Region          26..>204
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..206
                     /gene="LOC121361786"
                     /coded_by="XM_041482810.1:334..954"
                     /db_xref="GeneID:121361786"
ORIGIN      
        1 mvpgsagaep phpgwylrde gsgalyrrgr llgevtevts grlyaakvip rarlaapgig
       61 drvererelq chlrhrhivr lhghfadrgh lclllelcsr gsladilrar grltepelry
      121 ylrqllsglq ylhghglvhr dlklsnflvt ermrvkigdl glaqraappg rrwgalcgtp
      181 gylapevldr rghaapsdiw algcav
//
LOCUS       XP_041338753             178 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive serine/threonine-protein kinase PLK5-like isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338753
VERSION     XP_041338753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="inactive serine/threonine-protein kinase
                     PLK5-like isoform X3"
                     /calculated_mol_wt=19822
     Region          24..>176
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..178
                     /gene="LOC121361786"
                     /coded_by="XM_041482819.1:334..870"
                     /db_xref="GeneID:121361786"
ORIGIN      
        1 mvpgsagaep phpgwylrde gsgalyrrgr llgeverere lqchlrhrhi vrlhghfadr
       61 ghlclllelc srgsladilr argrltepel ryylrqllsg lqylhghglv hrdlklsnfl
      121 vtermrvkig dlglaqraap pgrrwgalcg tpgylapevl drrghaapsd iwalgcav
//
LOCUS       XP_041338766             391 aa            linear   VRT 06-MAY-2021
DEFINITION  HAUS augmin-like complex subunit 8 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338766
VERSION     XP_041338766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="HAUS augmin-like complex subunit 8 isoform X1"
                     /calculated_mol_wt=43784
     Region          186..>372
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <200..252
                     /region_name="CCDC47"
                     /note="PAT complex subunit CCDC47; cl46382"
                     /db_xref="CDD:480722"
     CDS             1..391
                     /gene="HAUS8"
                     /coded_by="XM_041482832.1:80..1255"
                     /db_xref="GeneID:121361799"
ORIGIN      
        1 mssegnataa akptpkakrr ggrivqsryl qfdkkhnkev prvpssgvaq rkaeknasss
       61 ssssnsslps srikarsfvs qkhetsasvd lsslnqaale kgdlqstlld egkmklpdld
      121 isvinepggl lthpidlnrr aahglccdtd nksdskkssy sesaseedse tqeiseetde
      181 egdscdlmae lesetllltf lriktekkia kmeekaeknl lklceekrke qeklwelkre
      241 illkereqkl netldkqiev lsplvavceq fkeqyksfaa sldatrhelp iksihiegdk
      301 qtyldelgkq lmitqellte vmpnhsedsa kalgalkeiq evsqqlskgl qrsftdvqnl
      361 sfeaskevsl hnqyvceekh gvdvvkrwyf n
//
LOCUS       XP_041338776             388 aa            linear   VRT 06-MAY-2021
DEFINITION  HAUS augmin-like complex subunit 8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338776
VERSION     XP_041338776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="HAUS augmin-like complex subunit 8 isoform X2"
                     /calculated_mol_wt=43456
     Region          183..>369
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <197..249
                     /region_name="CCDC47"
                     /note="PAT complex subunit CCDC47; cl46382"
                     /db_xref="CDD:480722"
     CDS             1..388
                     /gene="HAUS8"
                     /coded_by="XM_041482842.1:80..1246"
                     /db_xref="GeneID:121361799"
ORIGIN      
        1 mssegnataa akptpkakrr ggrivqsryl qfdkkhnkev prvpssgvaq rknassssss
       61 snsslpssri karsfvsqkh etsasvdlss lnqaalekgd lqstlldegk mklpdldisv
      121 inepggllth pidlnrraah glccdtdnks dskkssyses aseedsetqe iseetdeegd
      181 scdlmaeles etllltflri ktekkiakme ekaeknllkl ceekrkeqek lwelkreill
      241 kereqklnet ldkqievlsp lvavceqfke qyksfaasld atrhelpiks ihiegdkqty
      301 ldelgkqlmi tqelltevmp nhsedsakal galkeiqevs qqlskglqrs ftdvqnlsfe
      361 askevslhnq yvceekhgvd vvkrwyfn
//
LOCUS       XP_041338789             401 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingosine 1-phosphate receptor 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041338789
VERSION     XP_041338789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="sphingosine 1-phosphate receptor 4"
                     /calculated_mol_wt=43690
     Region          63..333
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          65..89
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320471"
     Region          98..119
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320471"
     Region          135..157
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320471"
     Region          180..196
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320471"
     Region          217..240
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320471"
     Region          266..288
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320471"
     Region          301..326
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320471"
     CDS             1..401
                     /gene="S1PR4"
                     /coded_by="XM_041482855.1:134..1339"
                     /db_xref="GeneID:121361811"
ORIGIN      
        1 maapvlgwlv nhslllplds aqllgtkssc lqlaatrnvn iilqhynfsg kltarhsgde
       61 gmgllrtafa iiscliilen llvllavlrc lrgrrwvysc iasitlsdll agiaylcnlc
      121 lsgsktfqls pqlwflregi lfialaastf sllvtavery samvrpiaen easktlrlrg
      181 livacwllal vigllpllgw nclcdfqacs vllplyskdy ilfsvvmfsi illgiiglyi
      241 sifhlvqass rqscsrhgrr rslrllktvl milgafilcw splfvlllfd vfcdtgacsh
      301 lhsldwtlal allnsgvnpv iyslrsvevr ravgsllccc cvraglcrpg scvaisdins
      361 gsstesslrc rdsfrgsvaw narpraplss nssmmsnlps l
//
LOCUS       XP_041338800             282 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: granzyme E-like [Pyrgilauda ruficollis].
ACCESSION   XP_041338800
VERSION     XP_041338800.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482866.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="LOW QUALITY PROTEIN: granzyme E-like"
                     /calculated_mol_wt=30682
     Region          88..278
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(116,161,240)
                     /site_type="active"
                     /db_xref="CDD:238113"
     CDS             1..282
                     /gene="LOC121361819"
                     /coded_by="XM_041482866.1:1..849"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121361819"
ORIGIN      
        1 mslisvvsws lvsgyktllg agrdpsscst skgsxqkavm ehlqslllpl llvmcppvss
       61 tpsiadypwk wrerggeaka psrthptpyl aflqgkdnhs cggfllapgw vvtaaqclgh
      121 kpltvilgah tlqrreeswq tfqvkeyhch pgftspregn dilllklngn atsnghvrpi
      181 slekskvrgg tecsvagwgy rtatvtiirq rdclshypgl adnlicgrsr ssrvpekgda
      241 gdplvcnnka fgifsyrhnn wpgfythiap flpwinsvmk ss
//
LOCUS       XP_041338812             244 aa            linear   VRT 06-MAY-2021
DEFINITION  mast cell protease 1A-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041338812
VERSION     XP_041338812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..244
                     /product="mast cell protease 1A-like isoform X1"
                     /calculated_mol_wt=26538
     Region          28..241
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            28
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(68,111,203)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(197,218,220)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..244
                     /gene="LOC121361826"
                     /coded_by="XM_041482878.1:44..778"
                     /db_xref="GeneID:121361826"
ORIGIN      
        1 mcqpqavpal llllccpwas asalrggivg ghearphshp ymaflkiael ggcggflvap
       61 dwvmsaahcm gnitvilgah nihepektqq vrgvlkyheh peynpstmen dimllqltsk
      121 valneyiqpi slprtgsdlp tgtkcmiagw glidedratn klfetkvsiy srrkctlfyp
      181 hldsgmvcag sfhqlkdssq gdsggplvcn kvaqgivsfg ynsppgvytr isnylpwikk
      241 vmkk
//
LOCUS       XP_041338821             203 aa            linear   VRT 06-MAY-2021
DEFINITION  cathepsin G-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041338821
VERSION     XP_041338821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..203
                     /product="cathepsin G-like isoform X2"
                     /calculated_mol_wt=22247
     Region          12..200
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(27,70,162)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(156,177,179)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..203
                     /gene="LOC121361826"
                     /coded_by="XM_041482887.1:106..717"
                     /db_xref="GeneID:121361826"
ORIGIN      
        1 maflkiaelg gcggflvapd wvmsaahcmg nitvilgahn ihepektqqv rgvlkyhehp
       61 eynpstmend imllqltskv alneyiqpis lprtgsdlpt gtkcmiagwg lidedratnk
      121 lfetkvsiys rrkctlfyph ldsgmvcags fhqlkdssqg dsggplvcnk vaqgivsfgy
      181 nsppgvytri snylpwikkv mkk
//
LOCUS       XP_041338832             693 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase-related protein type 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338832
VERSION     XP_041338832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482898.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..693
                     /product="phospholipid phosphatase-related protein type 3"
                     /calculated_mol_wt=74291
     Region          125..274
                     /region_name="PAP2_wunen"
                     /note="PAP2, wunen subfamily. Most likely a family of
                     membrane associated phosphatidic acid phosphatases. Wunen
                     is a drosophila protein expressed in the central nervous
                     system, which provides repellent activity towards
                     primordial germ cells (PGCs), controls the...; cd03384"
                     /db_xref="CDD:239479"
     Site            order(148,155,201..203,248,254,258)
                     /site_type="active"
                     /db_xref="CDD:239479"
     CDS             1..693
                     /gene="PLPPR3"
                     /coded_by="XM_041482898.1:39..2120"
                     /db_xref="GeneID:121361840"
ORIGIN      
        1 mippkekara pkdsmtllpc fyfvelpiva ssvvtlyfle ltdlfkpakv gfqchdrals
       61 mpyvetneel ipllmllsla faapaasimv gegmvyclqs rlkgragaeg sinaggcnfn
      121 sflrrtvrfv gvhvfglcat alvtdviqla tgyhapfflt vckpnytllg tpcdanpyit
      181 qdicsgtdkh ailsarktfp sqhatlsafa avyvsmyfns iisdstkllk pilvfafaia
      241 agicgltqit qyrshpadvy vgfligsgia aylafhavgn fraptervpt qapakdalra
      301 ltqrghdsvy hqnksvstde lnpqarleea arpvprekns lgslkrasvd vdllaprspm
      361 gkenmvtfsn tlprvntpsm ddparrhmti hvpvdasrsk qlitewkqks legrsmtlae
      421 eaaqgravge pgeevppsly ptvqarsaer aamgprvliq prpgasqlvh ipeesqagag
      481 aaagsgaavr akwvmvaekg gaqrvanppr lmqviamskq qslvsvtpkh setsssstss
      541 dssqyrspse rdsssiitid ahaphhpvvh lsagngpwew ksgpkgpegp dtyelgevgk
      601 dfhgfrpaks agvspgssvs dmeqdepryg slaaipgaag gagerveapp egllatasrd
      661 stlrrkpaer dgpadsevdl yykkmqagrr fkd
//
LOCUS       XP_041338845             830 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 16 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338845
VERSION     XP_041338845.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482911.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..830
                     /product="mediator of RNA polymerase II transcription
                     subunit 16 isoform X1"
                     /calculated_mol_wt=92550
     Region          23..68
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          67..98
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          73..113
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          108..824
                     /region_name="Med16"
                     /note="Mediator complex subunit 16; pfam11635"
                     /db_xref="CDD:371639"
     Region          121..161
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..830
                     /gene="MED16"
                     /coded_by="XM_041482911.1:186..2678"
                     /db_xref="GeneID:121361848"
ORIGIN      
        1 mdlayvcewe kkpksnhcps iplvcawscr nliafttdlr neeekdlthm vhiidtehpw
       61 dvysvnsght evisclewdq sgsrllsada dghikcwsmt dhlanswent vgsvvegdpv
      121 valswlhngv klalhveksg asnfgekfsr vkfspsltlf ggkpmegwia vtisglvtvs
      181 llkpngqvlt ateslcrlrc rvaladvaft gggnivvats dgsstspvqf ykvcvsvvne
      241 kckidteilp slfmrcttdp arkdkypait hlkflardms eqvllcasnq nnsivecwsl
      301 rkeglpvnni fqqispvvgd kqpmilkwri lsatndldrv savalpklpi sltntdlkva
      361 ndtkffpglg lalafhdgsv hivhrlslqm mavfygsssq rpvdepalkr prttgplvhf
      421 kamqlswtsl alagvdshgk lsmlrispsm ghvldmnmsl rhllflleyc mvtgydwwdi
      481 llhvqpsmvq nlveklheey mrqnaalqqv lstrivamka slcklsssti arvcdyhakl
      541 fliaisctlk sllrphflnt pdkspgdrlt eicskitdvd idkvminlkt eefvlemttl
      601 qslqqliqwv gdfvlyllas lpnqgspvrp ghsflrdgas lgmfrelmvv iriwgllkps
      661 clpvytatsd tqdsmsllfr lltklwlccr eenhitepdd alideccllp sqllipnidw
      721 lpindgiisk lqnkqlvrlq fgkapglvgh tvssqfdafv rapgqpkidh lrrlhlgayp
      781 teecksctrc gcvtmlkspn kvtavkqweq rwiknclcgg lwrkmplsys
//
LOCUS       XP_041338852             830 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 16 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338852
VERSION     XP_041338852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482918.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..830
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..830
                     /product="mediator of RNA polymerase II transcription
                     subunit 16 isoform X1"
                     /calculated_mol_wt=92550
     Region          23..68
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          67..98
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          73..113
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          108..824
                     /region_name="Med16"
                     /note="Mediator complex subunit 16; pfam11635"
                     /db_xref="CDD:371639"
     Region          121..161
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..830
                     /gene="MED16"
                     /coded_by="XM_041482918.1:218..2710"
                     /db_xref="GeneID:121361848"
ORIGIN      
        1 mdlayvcewe kkpksnhcps iplvcawscr nliafttdlr neeekdlthm vhiidtehpw
       61 dvysvnsght evisclewdq sgsrllsada dghikcwsmt dhlanswent vgsvvegdpv
      121 valswlhngv klalhveksg asnfgekfsr vkfspsltlf ggkpmegwia vtisglvtvs
      181 llkpngqvlt ateslcrlrc rvaladvaft gggnivvats dgsstspvqf ykvcvsvvne
      241 kckidteilp slfmrcttdp arkdkypait hlkflardms eqvllcasnq nnsivecwsl
      301 rkeglpvnni fqqispvvgd kqpmilkwri lsatndldrv savalpklpi sltntdlkva
      361 ndtkffpglg lalafhdgsv hivhrlslqm mavfygsssq rpvdepalkr prttgplvhf
      421 kamqlswtsl alagvdshgk lsmlrispsm ghvldmnmsl rhllflleyc mvtgydwwdi
      481 llhvqpsmvq nlveklheey mrqnaalqqv lstrivamka slcklsssti arvcdyhakl
      541 fliaisctlk sllrphflnt pdkspgdrlt eicskitdvd idkvminlkt eefvlemttl
      601 qslqqliqwv gdfvlyllas lpnqgspvrp ghsflrdgas lgmfrelmvv iriwgllkps
      661 clpvytatsd tqdsmsllfr lltklwlccr eenhitepdd alideccllp sqllipnidw
      721 lpindgiisk lqnkqlvrlq fgkapglvgh tvssqfdafv rapgqpkidh lrrlhlgayp
      781 teecksctrc gcvtmlkspn kvtavkqweq rwiknclcgg lwrkmplsys
//
LOCUS       XP_041338858             781 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 16 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338858
VERSION     XP_041338858.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482924.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..781
                     /product="mediator of RNA polymerase II transcription
                     subunit 16 isoform X2"
                     /calculated_mol_wt=86832
     Region          18..49
                     /region_name="WD40"
                     /note="WD40 repeats; smart00320"
                     /db_xref="CDD:197651"
     Region          24..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          59..775
                     /region_name="Med16"
                     /note="Mediator complex subunit 16; pfam11635"
                     /db_xref="CDD:371639"
     Region          72..112
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..781
                     /gene="MED16"
                     /coded_by="XM_041482924.1:210..2555"
                     /db_xref="GeneID:121361848"
ORIGIN      
        1 mvhiidtehp wdvysvnsgh tevisclewd qsgsrllsad adghikcwsm tdhlanswen
       61 tvgsvvegdp vvalswlhng vklalhveks gasnfgekfs rvkfspsltl fggkpmegwi
      121 avtisglvtv sllkpngqvl tateslcrlr crvaladvaf tgggnivvat sdgsstspvq
      181 fykvcvsvvn ekckidteil pslfmrcttd parkdkypai thlkflardm seqvllcasn
      241 qnnsivecws lrkeglpvnn ifqqispvvg dkqpmilkwr ilsatndldr vsavalpklp
      301 isltntdlkv andtkffpgl glalafhdgs vhivhrlslq mmavfygsss qrpvdepalk
      361 rprttgplvh fkamqlswts lalagvdshg klsmlrisps mghvldmnms lrhllflley
      421 cmvtgydwwd illhvqpsmv qnlveklhee ymrqnaalqq vlstrivamk aslcklssst
      481 iarvcdyhak lfliaisctl ksllrphfln tpdkspgdrl teicskitdv didkvminlk
      541 teefvlemtt lqslqqliqw vgdfvlylla slpnqgspvr pghsflrdga slgmfrelmv
      601 viriwgllkp sclpvytats dtqdsmsllf rlltklwlcc reenhitepd dalideccll
      661 psqllipnid wlpindgiis klqnkqlvrl qfgkapglvg htvssqfdaf vrapgqpkid
      721 hlrrlhlgay pteecksctr cgcvtmlksp nkvtavkqwe qrwiknclcg glwrkmplsy
      781 s
//
LOCUS       XP_041338864             266 aa            linear   VRT 06-MAY-2021
DEFINITION  complement factor D [Pyrgilauda ruficollis].
ACCESSION   XP_041338864
VERSION     XP_041338864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="complement factor D"
                     /calculated_mol_wt=28928
     Region          29..254
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            29
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(69,117,211)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(205,226,228)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..266
                     /gene="CFD"
                     /coded_by="XM_041482930.1:95..895"
                     /db_xref="GeneID:121361872"
ORIGIN      
        1 mgpspapvlv lalllllwap vkgqprgril rgsearphlk pymaslqldg qhvcggflia
       61 eqwvlsaahc teetdgklfq vllgahslsq pephkrlyqv raqfphpgsn ihnnkddlll
      121 lqleekaeln tdvrvlpfqr edrdvaadtv cevagwgttd hsgtrpdrlq qverpvisrd
      181 vcnhrtrhdg tvtqnmmctd srrkdtckgd sggplvcggv aegvvtagsr vcgnykkpai
      241 ytriapyaaw idsvmasaad gegdtr
//
LOCUS       XP_041338873             257 aa            linear   VRT 06-MAY-2021
DEFINITION  R3H domain-containing protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041338873
VERSION     XP_041338873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482939.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509766.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="R3H domain-containing protein 4"
                     /calculated_mol_wt=29658
     Region          37..171
                     /region_name="R3H-assoc"
                     /note="R3H-associated N-terminal domain; pfam13902"
                     /db_xref="CDD:464031"
     Region          <204..236
                     /region_name="R3H"
                     /note="R3H domain; pfam01424"
                     /db_xref="CDD:460206"
     CDS             1..257
                     /gene="R3HDM4"
                     /coded_by="XM_041482939.1:124..897"
                     /db_xref="GeneID:121361884"
ORIGIN      
        1 mvvlrggagp eepfpriedc lplledspsk rfspskrkqy yinkairnsd liprakgrks
       61 lqrlentryl mtlleqddcg sdegelshsa tpsifteacn netyveiwnd fmnrsgeeqe
      121 rvllyleeea rkkhrrklpv knedkwkelp aytpqecfqr isrrlratlk rgripmgtle
      181 gleeellaff svtphsvyta lmdnsferll lhalcqymdl asassdiegk rqmkvsnkhr
      241 vflppellls dylgqms
//
LOCUS       XP_041338926              93 aa            linear   VRT 06-MAY-2021
DEFINITION  cleavage and polyadenylation specificity factor subunit 1-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041338926
VERSION     XP_041338926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041482992.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509811.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..93
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..93
                     /product="cleavage and polyadenylation specificity factor
                     subunit 1-like"
                     /calculated_mol_wt=10499
     Region          <1..58
                     /region_name="CPSF_A"
                     /note="CPSF A subunit region; pfam03178"
                     /db_xref="CDD:427182"
     CDS             1..93
                     /gene="LOC121361916"
                     /coded_by="XM_041482992.1:71..352"
                     /db_xref="GeneID:121361916"
ORIGIN      
        1 mqektyrrll mlqnalssal phlaglnpra frllqserrl lqnavrnvld gellgrflyl
       61 samergelak kigttpdiil ddlleidrvt ahf
//
LOCUS       XP_041338951             166 aa            linear   VRT 06-MAY-2021
DEFINITION  D-glucuronyl C5-epimerase-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041338951
VERSION     XP_041338951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509840.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>166
                     /product="D-glucuronyl C5-epimerase-like"
     CDS             1..166
                     /gene="LOC121361928"
                     /coded_by="XM_041483017.1:6..>504"
                     /db_xref="GeneID:121361928"
ORIGIN      
        1 mrclarlssk allvlcslla llslllwtrc shhprpppgp perpgipdse easpqdapra
       61 pgmagsagra agpryeeidc vineehtvkg rreggevflp fswvekyfqv ygriaqadgg
      121 erfefshsys kvyaqrapyr pdgvfmsfeg ynvelrdrvk cisgve
//
LOCUS       XP_041338966             264 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121361932 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338966
VERSION     XP_041338966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509855.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..264
                     /product="uncharacterized protein LOC121361932 isoform X1"
                     /calculated_mol_wt=28577
     Region          15..136
                     /region_name="beta-trefoil_Ricin_MRC-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in the macrophage mannose receptor (MRC) family;
                     cl49621"
                     /db_xref="CDD:483961"
     Site            order(29..31,36,38,46..47)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467784"
     Site            order(67..68,78,80,88..89)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467784"
     Region          148..>191
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     CDS             1..264
                     /gene="LOC121361932"
                     /coded_by="XM_041483032.1:9..803"
                     /db_xref="GeneID:121361932"
ORIGIN      
        1 mslsphcppv ptastsflly nqhhsgcvva agqwlslapc vpsspsqlfq wlpggllrha
       61 atgscaeaaa esvgalvrlr pcreasrlqr wacgrgalla lagtalhfnf gherlkrvvl
      121 ydgagnwsrw lahgsdrdvc srayflpcsr gwvfsrnscy ffsnfaaswe nsrtfcwalg
      181 sqllevddae eklvapgraq rgqpgelrgr garralgrls lrdppdlglr gtpltqnpgn
      241 spqnpgnlgk nsnkcvrvlg lnwd
//
LOCUS       XP_041338975             229 aa            linear   VRT 06-MAY-2021
DEFINITION  macrophage mannose receptor 1-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041338975
VERSION     XP_041338975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509855.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="macrophage mannose receptor 1-like isoform X2"
                     /calculated_mol_wt=24833
     Region          15..136
                     /region_name="beta-trefoil_Ricin_MRC-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in the macrophage mannose receptor (MRC) family;
                     cl49621"
                     /db_xref="CDD:483961"
     Site            order(29..31,36,38,46..47)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467784"
     Site            order(67..68,78,80,88..89)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467784"
     Region          148..>191
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     CDS             1..229
                     /gene="LOC121361932"
                     /coded_by="XM_041483041.1:9..698"
                     /db_xref="GeneID:121361932"
ORIGIN      
        1 mslsphcppv ptastsflly nqhhsgcvva agqwlslapc vpsspsqlfq wlpggllrha
       61 atgscaeaaa esvgalvrlr pcreasrlqr wacgrgalla lagtalhfnf gherlkrvvl
      121 ydgagnwsrw lahgsdrdvc srayflpcsr gwvfsrnscy ffsnfaaswe nsrtfcwalg
      181 sqllevddae eklvapgraq rgqpgelrgr garralgrls lrdppdlgv
//
LOCUS       XP_041338986             666 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041338986
VERSION     XP_041338986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..666
                     /product="succinate dehydrogenase [ubiquinone]
                     flavoprotein subunit, mitochondrial"
                     /calculated_mol_wt=72779
     Region          54..666
                     /region_name="PTZ00139"
                     /note="Succinate dehydrogenase [ubiquinone] flavoprotein
                     subunit; Provisional"
                     /db_xref="CDD:240286"
     CDS             1..666
                     /gene="SDHA"
                     /coded_by="XM_041483052.1:32..2032"
                     /db_xref="GeneID:121361942"
ORIGIN      
        1 maaaaaargl akrwlrptaa srawpaacqa ptrnlhftvy gkknastkvs dsistqypvv
       61 dhefdavvvg aggaglraaf glseagfnta cvtklfptrs htvaaqggin aalgnmeddn
      121 wrwhfydtvk gsdwlgdqda ihymteqapa avielenygm pfsrteegki yqrafggqsl
      181 qfgkggqahr cccvadrtgh sllhtlygrs lrydtsyfve yfaldllmen gecrgvialc
      241 iedgtihrfr akntviatgg ygrtyfscts ahtstgdgta mvtraglpcq dlefvqfhpt
      301 giygagclit egcrgeggil insqgerfme ryapvakdla srdvvsrsmt ieiregrgcg
      361 pekdhvylql hhlppqqlat rlpgisetam ifagvdvtke pipvlptvhy nmggiptnyk
      421 gqvithvnge dkvvpglyac geaasasvhg anrlgansll dlvvfgraca ltiantckpg
      481 epvppikpna geesvanldk lrfangsirt sevrlnmqka mqnhaavfrt gsvlqegcek
      541 lsqiygdlah lktfdrgivw ntdlvetlel qnlmlcalqt iysaearkes rgaharedyk
      601 lrvdefdysk plqgqqrkpf eehwrkhtls yvdiptgkvt lkyrpvidkt lneedcqtvp
      661 pairsy
//
LOCUS       XP_041338999             506 aa            linear   VRT 06-MAY-2021
DEFINITION  fumarate hydratase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041338999
VERSION     XP_041338999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483065.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..506
                     /product="fumarate hydratase, mitochondrial"
                     /calculated_mol_wt=54302
     Region          45..504
                     /region_name="FumC"
                     /note="Fumarate hydratase class II [Energy production and
                     conversion]; COG0114"
                     /db_xref="CDD:439884"
     CDS             1..506
                     /gene="FH"
                     /coded_by="XM_041483065.1:38..1558"
                     /db_xref="GeneID:121361948"
ORIGIN      
        1 mhrslracrr lgrsagllls rplppatpgr wipappraam ssqeafriey dtfgelkvps
       61 dkyygaqtvr stmnfkiggv sermpvqvir afgilkraaa evnqdygldp kiakaivqaa
      121 nevaegklnd hfplvvwqtg sgtqtnmnvn evisnraiei mggtlgskkp vhpndhvnks
      181 qssndtfpta mhiaaaqevn evllpglkkl qnalegkske fsqiikigrt htqdavpltl
      241 gqefsgyvqq ikygvaries tmprvyqlaa ggtavgtgln trigfaekva akvaeltglp
      301 fvtapnkfea laahdalvel sgamntvacs lmkiandirf lgsgprsglg elilpenepg
      361 ssimpgkvnp tqceavtmva aqvmgnhvav tvggsnghfe lnvfkpmmik nvlnsarllg
      421 dvcvsftdnc vvgiqantdr inklmneslm lvtalnphig ydkaakiakt ahkegttlke
      481 aaiklgflts eqfdqwvkpk dmlgpq
//
LOCUS       XP_041339014            1013 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 245 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339014
VERSION     XP_041339014.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483080.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1013
                     /product="transmembrane protein 245 isoform X1"
                     /calculated_mol_wt=110166
     Region          <736..974
                     /region_name="PerM"
                     /note="Predicted PurR-regulated permease PerM [General
                     function prediction only]; COG0628"
                     /db_xref="CDD:440393"
     CDS             1..1013
                     /gene="TMEM245"
                     /coded_by="XM_041483080.1:91..3132"
                     /db_xref="GeneID:121361953"
ORIGIN      
        1 mrlrrkllgs staqplaaff sgrhegagqp rpalgeaqgp gtapqvlpag gsaaaalpeq
       61 nyisqlasrp applsrragr tpgaarrrhy spgplralgh drpgslgpap rppaaavpvp
      121 amadsaepaa pdagpaaapd agpaaappgs pvrerraggs pgagaamprl plggqggaag
      181 mslprlekpi kqafyntgal lfaglccgaa vlvyfileaf lrpllwavlc gtflhpfkts
      241 ltalgrrwlg rlhrsrtpvl laalllpicf anygvealge qvlrrrrlll llgaggplly
      301 glyclgsslg vqvllaqaar iicqgldyfs sqwiwtlvvg yllmvsfkwn isterylkav
      361 svpvwimllf hlasvagswr ipvflvivfl mtvgmlheqq ngkessgael pgqmisiaas
      421 tiamaismte desnnehssq psgstaesdq pppprasssf stssssssgn rqrteigsll
      481 rkkktsdiyf vtlvwaiviv qiwlnfwivq llpvpfavwa lkkfvvhfgv lnfmanhcks
      541 wwqlvenfvk erqealaprp irglgsvmlk ldsklwhwln kkiivwlekm ldkiisifii
      601 fllvigtlll allltakvhq esvhmiqvts slinetvash pewanwlpea qviqkalnsa
      661 annvyqygre withklhkil gekvnntavi ekqvlelwdr lyhswfvknv thsgrhkghk
      721 whinrqnswl gdildwqdva sfvhdnietf lsileslwiv msrnvsllft tvtalvtilf
      781 hsgtallnfv lsvviflttl fyllsssdey ykpvkwvisl tplsqpgpss nivgqsveea
      841 irgvfdaslk magfyglytw lthtifgini vfipsalaai lgavpflgty waavpavldl
      901 wlvqgrgcka llllvfhllp tyfvdtaiys disggghpyl tglavaggay ylglegaiig
      961 pillcilvva sniysamlvs ptnsvptpsq aawplqigrs prespeeikm sae
//
LOCUS       XP_041339023            1005 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 245 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339023
VERSION     XP_041339023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1005
                     /product="transmembrane protein 245 isoform X2"
                     /calculated_mol_wt=109060
     Region          <728..966
                     /region_name="PerM"
                     /note="Predicted PurR-regulated permease PerM [General
                     function prediction only]; COG0628"
                     /db_xref="CDD:440393"
     CDS             1..1005
                     /gene="TMEM245"
                     /coded_by="XM_041483089.1:92..3109"
                     /db_xref="GeneID:121361953"
ORIGIN      
        1 mrlrrkllgs staqplaaff sgrhegagqp rpalgeaqgp gtapqvlpag gsaaaalpeq
       61 nyisqlasrp applsrragr tpgaarrrhy spgplralgh drpgslgpap rppaaavpvp
      121 amadsaepaa pdagpaaapd agpaaappgs pvrerraggs pgagaamprl plggqggaag
      181 mslprlekpi kqafyntgal lfaglccgaa vlvyfileaf lrpllwavlc gtflhpfkts
      241 ltalgrrwlg rlhrsrtpvl laalllpicf anygvealge qvlrrrrlll llgaggplly
      301 glyclgsslg vqvllaqaar iicqgldyfs sqwiwtlvvg yllmvsfkwn isterylkav
      361 svpvwimllf hlasvagswr ipvflvivfl mtvgmlheqq ngkessgael pgqmisiaas
      421 tiamaismte desnnehssq psgstaesdq pppprasssf stssssssgn rqrteigsll
      481 rkkktsdiyf vtlvwaiviv qiwlnfwivq llpvpfavwa lkkfvvhfgv lnfmanhcks
      541 wwqlvenfvk erqealaprp irglgsvmlk ldskiivwle kmldkiisif iifllvigtl
      601 llallltakv hqesvhmiqv tsslinetva shpewanwlp eaqviqkaln saannvyqyg
      661 rewithklhk ilgekvnnta viekqvlelw drlyhswfvk nvthsgrhkg hkwhinrqns
      721 wlgdildwqd vasfvhdnie tflsileslw ivmsrnvsll fttvtalvti lfhsgtalln
      781 fvlsvviflt tlfyllsssd eyykpvkwvi sltplsqpgp ssnivgqsve eairgvfdas
      841 lkmagfygly twlthtifgi nivfipsala ailgavpflg tywaavpavl dlwlvqgrgc
      901 kallllvfhl lptyfvdtai ysdisggghp yltglavagg ayylglegai igpillcilv
      961 vasniysaml vsptnsvptp sqaawplqig rsprespeei kmsae
//
LOCUS       XP_041339033             977 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 245 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339033
VERSION     XP_041339033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..977
                     /product="transmembrane protein 245 isoform X3"
                     /calculated_mol_wt=106478
     Region          <700..938
                     /region_name="PerM"
                     /note="Predicted PurR-regulated permease PerM [General
                     function prediction only]; COG0628"
                     /db_xref="CDD:440393"
     CDS             1..977
                     /gene="TMEM245"
                     /coded_by="XM_041483099.1:90..3023"
                     /db_xref="GeneID:121361953"
ORIGIN      
        1 mrlrrkllgs staqplaaff sgrhegagqp rpalgeaqgp gtapqvlpag gsaaaalpeq
       61 nyisqlasrp applsrragr tpgaarrrhy spgplralgh drpgslgpap rppaaavpvp
      121 amadsaepaa pdagpaaapd agpaaappgs pvrerraggs pgagaamprl plggqggaag
      181 mslprlekpi kqafyntgal lfaglccgaa vlvyfileaf lrpllwavlc gtflhpfkts
      241 ltalgrrwlg rlhrsrtpvl laalllpicf anygvealge qvlrrrrlll llgaggplly
      301 glyclgsslg vqvllaqaar iicqgldyfs sqwiwtlvvg yllmvsfkwn isterylkav
      361 svpvwimllf hlasvagswr ipvflvivfl mtvgmlheqq ngkessgsta esdqppppra
      421 sssfstssss ssgnrqrtei gsllrkkkts diyfvtlvwa ivivqiwlnf wivqllpvpf
      481 avwalkkfvv hfgvlnfman hckswwqlve nfvkerqeal aprpirglgs vmlkldsklw
      541 hwlnkkiivw lekmldkiis ifiifllvig tlllalllta kvhqesvhmi qvtsslinet
      601 vashpewanw lpeaqviqka lnsaannvyq ygrewithkl hkilgekvnn taviekqvle
      661 lwdrlyhswf vknvthsgrh kghkwhinrq nswlgdildw qdvasfvhdn ietflsiles
      721 lwivmsrnvs llfttvtalv tilfhsgtal lnfvlsvvif lttlfyllss sdeyykpvkw
      781 visltplsqp gpssnivgqs veeairgvfd aslkmagfyg lytwlthtif ginivfipsa
      841 laailgavpf lgtywaavpa vldlwlvqgr gckallllvf hllptyfvdt aiysdisggg
      901 hpyltglava ggayylgleg aiigpillci lvvasniysa mlvsptnsvp tpsqaawplq
      961 igrsprespe eikmsae
//
LOCUS       XP_041339044             219 aa            linear   VRT 06-MAY-2021
DEFINITION  charged multivesicular body protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041339044
VERSION     XP_041339044.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483110.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="charged multivesicular body protein 5"
                     /calculated_mol_wt=24616
     Region          1..201
                     /region_name="PTZ00464"
                     /note="SNF-7-like protein; Provisional; cl21588"
                     /db_xref="CDD:473916"
     CDS             1..219
                     /gene="CHMP5"
                     /coded_by="XM_041483110.1:106..765"
                     /db_xref="GeneID:121361964"
ORIGIN      
        1 mnrffgkakp kepppsltdc igkvdsraes idkkiarlda elvkykdqmk kmregpaknt
       61 vkqkalrvlk qkrmyeqqrd nlsqqsfnme qanytiqalk dtkttvdamk lgvkemkkay
      121 kqvkidqied iqdqledmme eanevqeals rsygtpeide ddleaeldal gdelladedn
      181 syldeaasap aipevtptdt knkdgvlvde fglpkipat
//
LOCUS       XP_041339057             209 aa            linear   VRT 06-MAY-2021
DEFINITION  BAG family molecular chaperone regulator 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339057
VERSION     XP_041339057.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483123.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="BAG family molecular chaperone regulator 1"
                     /calculated_mol_wt=23065
     Region          8..85
                     /region_name="Ubl_BAG1"
                     /note="ubiquitin-like (Ubl) domain found in BAG family
                     molecular chaperone regulator 1 (BAG1) and similar
                     proteins; cd01812"
                     /db_xref="CDD:340510"
     Region          110..190
                     /region_name="BAG"
                     /note="BAG domains, present in regulator of Hsp70
                     proteins; smart00264"
                     /db_xref="CDD:214591"
     CDS             1..209
                     /gene="BAG1"
                     /coded_by="XM_041483123.1:138..767"
                     /db_xref="GeneID:121361971"
ORIGIN      
        1 maapgapvtv tvtysnekhs iqvasqredg eptlqdmavl ieqvtgvpvp fqkliykgks
       61 lkeleqplsa lgvkngckvm ligkrnspee eaelkklkdl eksveqiank leevnkefts
      121 iqkgflakdl qaealkqldk rikgtaeqfm ktleqidain lpenfsdckl kkkglvkrvq
      181 vflaqcdtie gnigqemdkl qsknlalae
//
LOCUS       XP_041339071             357 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(rC)-binding protein 3-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339071
VERSION     XP_041339071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="poly(rC)-binding protein 3-like isoform X1"
                     /calculated_mol_wt=37490
     Region          9..85
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          96..174
                     /region_name="KH-I_PCBP3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 3 (PCBP3) and similar
                     proteins; cd22519"
                     /db_xref="CDD:411947"
     Site            order(108,113..114,116..120,123,127,135..138,143,147)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411947"
     Region          264..338
                     /region_name="KH-I_PCBP3_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 3 (PCBP3) and similar
                     proteins; cd22522"
                     /db_xref="CDD:411950"
     Site            order(281..285,287..291,293..295,298,306..307,309,317)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411950"
     CDS             1..357
                     /gene="LOC121361977"
                     /coded_by="XM_041483137.1:694..1767"
                     /db_xref="GeneID:121361977"
ORIGIN      
        1 mntkdgkvse gglnvtltir llmhgkevgs iigkkgetvk kmreesgari nisegtcper
       61 ivtitgptda ifkafsmial kfeedinasm tnssvtskpp vtlrlvvpas qcgsligkgg
      121 skikeirest gaqvqvagdm lpnsteravt isgtpdaiiq cvkqicvvml esppkgatip
      181 yrpkpasapi ifaggqvrad tilasagnht vlaqpqpapa ftiqgqyaip hpdvspahlt
      241 klhqlamqhp pftplgqttp gfpgldattp tssheltipn dligciigrq gskineirqm
      301 sgaqikiana tegsaerqvt itgspanisl aqylinasiy flkseclgda mqsmvha
//
LOCUS       XP_041339078             341 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(rC)-binding protein 3-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339078
VERSION     XP_041339078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="poly(rC)-binding protein 3-like isoform X2"
                     /calculated_mol_wt=36147
     Region          9..85
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          96..174
                     /region_name="KH-I_PCBP3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 3 (PCBP3) and similar
                     proteins; cd22519"
                     /db_xref="CDD:411947"
     Site            order(108,113..114,116..120,123,127,135..138,143,147)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411947"
     Region          236..310
                     /region_name="KH-I_PCBP3_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in poly(rC)-binding protein 3 (PCBP3) and similar
                     proteins; cd22522"
                     /db_xref="CDD:411950"
     Site            order(253..257,259..263,265..267,270,278..279,281,289)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411950"
     CDS             1..341
                     /gene="LOC121361977"
                     /coded_by="XM_041483144.1:694..1719"
                     /db_xref="GeneID:121361977"
ORIGIN      
        1 mntkdgkvse gglnvtltir llmhgkevgs iigkkgetvk kmreesgari nisegtcper
       61 ivtitgptda ifkafsmial kfeedinasm tnssvtskpp vtlrlvvpas qcgsligkgg
      121 skikeirest gaqvqvagdm lpnsteravt isgtpdaiiq cvkqicvvml esppkgatip
      181 yrpkpasapi ifaggqafti qgqyaiphpd ltklhqlamq hppftplgqt tpgfpgldat
      241 tptsshelti pndligciig rqgskineir qmsgaqikia nategsaerq vtitgspani
      301 slaqylinar dsphietrid pfifsctntt whasgsrkit i
//
LOCUS       XP_041339090             361 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 830 [Pyrgilauda ruficollis].
ACCESSION   XP_041339090
VERSION     XP_041339090.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483156.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="zinc finger protein 830"
                     /calculated_mol_wt=40281
     Region          14..>77
                     /region_name="PRP11"
                     /note="Splicing factor 3a, subunit 2 [RNA processing and
                     modification]; COG5246"
                     /db_xref="CDD:227571"
     Region          50..79
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          <215..>353
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..361
                     /gene="ZNF830"
                     /coded_by="XM_041483156.1:22..1107"
                     /db_xref="GeneID:121361991"
ORIGIN      
        1 maaagagagr kqvrqeelrr lmrekqrqna gkkridspfa kynslghlsc slcnapvkge
       61 llwqthvlgk qhrervaelk gtkqtatgsa agasshpvkr ktvetentdl krikgtdekp
      121 htsssglpad ffdeaeqdsa svhlskgpgp sllsgnyddd dddeeeeqeq sskssvvhkt
      181 eippptqevi anslpadffd tktpaapivs hsgsiqkaev qekvierken taealpegff
      241 ddpevdakvr kvdapkdqmd kewdefqkam rqvntiseai vaeddeegrl drqigeideq
      301 iecyrrvell rnrqdelkek lkeamrlraa qekeeedvgs edeeelqdll sqdwrvkgal
      361 l
//
LOCUS       XP_041339102             919 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein phosphatase non-receptor type 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339102
VERSION     XP_041339102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..919
                     /product="tyrosine-protein phosphatase non-receptor type
                     3"
                     /calculated_mol_wt=105008
     Region          31..222
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          216..309
                     /region_name="FERM_C_PTPN4_PTPN3_like"
                     /note="FERM domain C-lobe of Protein tyrosine phosphatase
                     non-receptor proteins 3 and 4 (PTPN4 and PTPN3); cd13189"
                     /db_xref="CDD:270010"
     Site            order(226,243,245,251)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270010"
     Site            order(255,260..263,298,302,305..306)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270010"
     Site            298..309
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270010"
     Region          510..599
                     /region_name="PDZ_PTPN3-4-like"
                     /note="PDZ domain of tyrosine-protein phosphatase
                     non-receptor type 3 (PTPN3), tyrosine-protein phosphatase
                     non-receptor type 4 (PTNP4), and related domains; cd06706"
                     /db_xref="CDD:467190"
     Site            order(524..530,542,545,576,580,583..584)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467190"
     Region          637..910
                     /region_name="PTPc-N3"
                     /note="catalytic domain of tyrosine-protein phosphatase
                     non-receptor type 3; cd14600"
                     /db_xref="CDD:350448"
     CDS             1..919
                     /gene="PTPN3"
                     /coded_by="XM_041483168.1:140..2899"
                     /db_xref="GeneID:121362000"
ORIGIN      
        1 mnsrlralgg rinnirasel pkektrseii cnvhfldgsv qsfkvnkqdt gqilldmtyn
       61 qlgvtekeyf glqqnetsvd sprwlepskp irkqlkggfp ctlhfrvrff ipdpntlqqe
      121 qtrhlfflql kidiaegrls cpissavvla syavqsqlgd ynasvhcsgy lsnynfipeq
      181 nkdfltkvet lheqhsglkq seaescyini artlefygve lhsgrdlhnl dlmigiassg
      241 iavyrklict sfypwvnilk isfkrkkffi qqrqkhnesr ehivafnmln yracknlwks
      301 cvehhtffqa kkslphekki lshywtlgsr npaksvnnqy crkviggmvw npsmrrslsv
      361 ehletkslps rsppvtpnwr sprlrheirk prhssvdnlt neisyitete dvfytykgsp
      421 tskdsdsefs qnrspqrrnv lgnsptrcsl trlspkalar spngvgnisg sypsegvdkq
      481 fletydnvtk ssstedssqy ycdkndlieg dlllvriipd eegkfgfnlk ggvdqkmpll
      541 vsritpgspa dkcipklneg dqivlingrd isehthdqvv mfikasresh trelallvrr
      601 kvvkqfvdpi sedeadshtl pesilpvcse yggdtleesm eqlrrglesg tvliqfeqly
      661 rkkpglavtc akvpqnmdkn rykdvlpyda triilqgded yinanyvnme ipsagivnry
      721 iatqgplpht cahfwqvvwd hklsliimlt tltergrtkc hqywpdppdv meygcfrvrc
      781 hsedctiayv vremvitnve teqqhtvthl qyvawpdhgv pddsmdflef vtfmrpkrvk
      841 nepvlvhcsa gigrtgvlvt metamclier nqpvypldiv rkmrdqramm vqtssqykfv
      901 ceailrvyke glvrpldss
//
LOCUS       XP_041339115             870 aa            linear   VRT 06-MAY-2021
DEFINITION  molybdenum cofactor sulfurase [Pyrgilauda ruficollis].
ACCESSION   XP_041339115
VERSION     XP_041339115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..870
                     /product="molybdenum cofactor sulfurase"
                     /calculated_mol_wt=96066
     Region          9..850
                     /region_name="PLN02724"
                     /note="Molybdenum cofactor sulfurase"
                     /db_xref="CDD:215384"
     CDS             1..870
                     /gene="MOCOS"
                     /coded_by="XM_041483181.1:87..2699"
                     /db_xref="GeneID:121362009"
ORIGIN      
        1 mageplsfra fldarpagce ygyghgdgls alrdrefprl rgityldhag salfpesllk
       61 aftddlrnni ygnphsqnis skltydtieh vryrilqhfh ttaedytiif tsgctaalkl
      121 iaesfpwipe gtkqpssrfc yltdshtsvv gmrgitasmn vlsvpikpke illaksqlpa
      181 eeqncttphl fsypaqsnfs gtkyplswiq diksgrlcpi klpgkwfvll daasyvsssp
      241 ldlgvhqadf ipisfykifg fptglgallv nnriapllrk tyfgggtaaa ylagddfyfp
      301 rksiaerfed gtvsfldiia lkhgfdvlek ltggmekikq htftlahyty tvlsnlkyan
      361 gapvvriysd tdfsnpdvqg piinfnvlde ngqvlgfsqv dsmaslhnih vrtgcfcntg
      421 acqmhldisn ediqrnlqag hvcgdnidlv dgrptgsvri sfgymssfed aqtflnfiia
      481 trlsnsvadv plqsvtkltt esvpddhlsf nkadklspil qisdrelrni pseaettgsw
      541 pppepeaesm raavsetavp tcrkggkpit vakiylypik scsafevtew pvgnqgllyd
      601 rnwmvvnqng vcmtqkqepr lclvnpsidl kqkmmviqae gmdpisvple dntgkeavic
      661 eskvcshrvk tydcgekiag wlstflrhpc rlirqssgvk skshqkntkg lssaanisls
      721 lvneaqylli nvasilqlke hisarlkepl eieelirrfr anivisapes feeeewaeis
      781 igalqfqvvg pcsrcqiici dqqsaernke ilqslsaarg rktnfgiylm nqplcssfsd
      841 tlsvgsqvlp vlkenteiqp ptsseekcsg
//
LOCUS       XP_041339131             838 aa            linear   VRT 06-MAY-2021
DEFINITION  band 4.1-like protein 4B [Pyrgilauda ruficollis].
ACCESSION   XP_041339131
VERSION     XP_041339131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483197.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..838
                     /product="band 4.1-like protein 4B"
                     /calculated_mol_wt=93755
     Region          97..273
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          269..362
                     /region_name="FERM_C_NBL4_NBL5"
                     /note="FERM domain C-lobe of Novel band 4.1-like protein 4
                     and 5 (NBL4 and 5); cd13186"
                     /db_xref="CDD:270007"
     Site            order(277,294,296,302)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270007"
     Site            order(306,311..314,351,355,358..359)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Site            351..362
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270007"
     Region          375..416
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     CDS             1..838
                     /gene="EPB41L4B"
                     /coded_by="XM_041483197.1:1..2517"
                     /db_xref="GeneID:121362027"
ORIGIN      
        1 mtpakasakc stngganpgi srcwveescw kaavlkkalg vlvdskwsls qqcalgtkea
       61 sgildgdrwr vasrlraiig vlvvnfyfra ctfqtacqkn akgqelfdqi vyhldlvetd
      121 yfglqfmdas qithwldhsk fikkqikigp pytlhfriky yssepnnlhe eftrylfvlq
      181 lrqdilsgkl kcpyetavel aalclqaelg ecehpehtpe lvsefrfapn qteamefdif
      241 qkwkecrgks paqaelcyln kakwlemygv dmhvvkgrdg ceyalgltpt gilifegank
      301 iglffwpkit kmdfkksklt lvvveddeqg reqehtfvfr ldsaktckhl wkcavehhaf
      361 frlrapansk ssrsdfirlg srfrfsgrte yqathgtrlr rtstferrps krypsrrhst
      421 ykannpvkaa qlcakntpev hnyqppyhpn ihpaqphwhp htpvnvsypl nnsdlhpfni
      481 eenggtpytt kmaarhhhhh rhhhhhanyg alapeskdiv savpnptkls sglpllydet
      541 shlkkietes vkvvgpwpal hvsmnkaeek kvsektlhap vspssvpdhl kcnilkaqve
      601 aafrvgaqav keetsfvnps ktsslqdpnv rspapvrpet tpttvptekq evkaprvrkl
      661 trqysfdedd lppalaaaaa astpvsstsp gsqktctpqt segqaqvspg gksstdagst
      721 falepgdllm dfteatpmik tfpadtsnpf fdpfttvpqf saefsdsklq ccgvqsspki
      781 tlvspspvlr slaetiptpt vqtvytshkp isladsaetl rrelerekmm krllmtel
//
LOCUS       XP_041339146             221 aa            linear   VRT 06-MAY-2021
DEFINITION  DOMON domain-containing protein FRRS1L [Pyrgilauda ruficollis].
ACCESSION   XP_041339146
VERSION     XP_041339146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483212.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="DOMON domain-containing protein FRRS1L"
                     /calculated_mol_wt=25042
     Region          22..174
                     /region_name="DOMON_SDR_2_like"
                     /note="DOMON domain of stromal cell-derived receptor 2
                     (ferric chelate reductase 1) and related proteins;
                     cd09628"
                     /db_xref="CDD:187686"
     Site            order(71,73..74,82,87..89,158,160,167,170)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:187686"
     CDS             1..221
                     /gene="LOC121362032"
                     /coded_by="XM_041483212.1:1..666"
                     /db_xref="GeneID:121362032"
ORIGIN      
        1 mvysdytgyp fptappvdpf akirvddcgk tkgcfrygkp gcnaetcdyf lsyrrigadv
       61 efelsadtdg wvavgfssdk kmggddvmac vhddngrvri qhfynvgqwa keiqrnpard
      121 eegvfennrv tcrfkrpvyv preetivdlh lswyylfawg paiqgsitrh didsppvser
      181 vvsiykyedi fmpsaayqtf sspfcllliv altfyllmgt p
//
LOCUS       XP_041339159             134 aa            linear   VRT 06-MAY-2021
DEFINITION  DOMON domain-containing protein FRRS1L-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339159
VERSION     XP_041339159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483225.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509877.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..134
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..134
                     /product="DOMON domain-containing protein FRRS1L-like"
                     /calculated_mol_wt=15491
     Region          <1..87
                     /region_name="DOMON_like"
                     /note="Domon-like ligand-binding domains; cl14783"
                     /db_xref="CDD:472705"
     CDS             1..134
                     /gene="LOC121362041"
                     /coded_by="XM_041483225.1:1..405"
                     /db_xref="GeneID:121362041"
ORIGIN      
        1 macvhddngr vriqhfynvg qwakeiqrnp ardeegvfen nrvtcrfkrp vyvpreetiv
       61 dlhlswyylf awgpaiqgsi trhdidsppv servvsiyky edifmpsaay qtfsspfcll
      121 livaltfyll mgtp
//
LOCUS       XP_041339181             698 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121362048 [Pyrgilauda ruficollis].
ACCESSION   XP_041339181
VERSION     XP_041339181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483247.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509878.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..698
                     /product="uncharacterized protein LOC121362048"
                     /calculated_mol_wt=76414
     CDS             1..698
                     /gene="LOC121362048"
                     /coded_by="XM_041483247.1:1..2097"
                     /db_xref="GeneID:121362048"
ORIGIN      
        1 mnphrdchis agsahqeats atesltppls spqlspallq pqvtvvaalr ellateprwn
       61 millpdsadi lnrdledfsr elratikcid dtwwpdivts gdgdpvtsls qalaaykgtp
      121 wtawdrvkme aimwqglvdv lmerwvelsg katklrntww evvseaadma initslanyr
      181 qdkaardgta qkkmvelgqa lgreegtevv aghevwvrie prvaasevtk ptklrqlvkv
      241 tlgplehlma acdeatafpr elqrlledie aalegtneas rdvpedlvak vtmakrlwea
      301 narlakdhlv gavddivtiy fhdgpaspsg igvtercqra iediprllrl pehpqsvpkv
      361 spvsvepqev sppqlqalva vvatlgkvva tvtgphrgkf lrespdslhe dlknftqnlc
      421 kildhgdvts ldhrrvtslg hrrvtflgyr rvtsvgqrgv tslghhsvps lgqalatlgv
      481 tlgttrasvr avasawresv aklvdscdql areatklrda cgkvvmdqql mvaldkkeva
      541 remathdahv aaatneamge avgatrwamv atkrehwaem algllqclva acdratlfnw
      601 nmewrlkdie ailkgtnels pdvlqalvak vaefewlwva strlakdhll galgvidnil
      661 sspcgdhggp igpgsrmvak rcqkaikdip rlllwwcl
//
LOCUS       XP_041339211             205 aa            linear   VRT 06-MAY-2021
DEFINITION  EVI5-like protein, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041339211
VERSION     XP_041339211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483277.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509911.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>205
                     /product="EVI5-like protein"
     Region          66..>205
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..205
                     /gene="LOC121362067"
                     /coded_by="XM_041483277.1:<1..>616"
                     /codon_start=2
                     /db_xref="GeneID:121362067"
ORIGIN      
        1 lleadsksmr svngsrrnsg sslvssssas snlshleedt wilwgrivne wdewrkkkek
       61 llkelirkgi phhfraivwq llcsaaelpl kaqysellrm sspcerlirr diartypehd
      121 ffkgqdslgq evlfnvmkay slvdrevgyc qgsafivgll lmqmpeeeaf svfvrlmqey
      181 rlrelfkpsm aelglciyqf efllq
//
LOCUS       XP_041339225             162 aa            linear   VRT 06-MAY-2021
DEFINITION  electron transfer flavoprotein subunit beta [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339225
VERSION     XP_041339225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509922.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="electron transfer flavoprotein subunit beta"
                     /calculated_mol_wt=17628
     Region          <1..59
                     /region_name="AANH_superfamily"
                     /note="Adenine nucleotide alpha hydrolase (AANH)
                     superfamily; cl00292"
                     /db_xref="CDD:469708"
     CDS             1..162
                     /gene="ETFB"
                     /coded_by="XM_041483291.1:133..621"
                     /db_xref="GeneID:121362074"
ORIGIN      
        1 mldwpqgtfa srvqlesgav rverevdggl etlrlrlpav ltadlrlnep ryatlpnimv
       61 rggtprapaf prgspktpgi pqkfpeipvv piaanggrpv vpklgslrmg flqnsgysqn
      121 swdspkflga phisripkfl gdsqkfpkfh knfhgshsgq wg
//
LOCUS       XP_041339237             317 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A
            alpha isoform, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041339237
VERSION     XP_041339237.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483303.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509922.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>317
                     /product="serine/threonine-protein phosphatase 2A 65 kDa
                     regulatory subunit A alpha isoform"
     Region          13..37
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(29..30,33,36..37,67..68,71,74..75,78,106..107,110,
                     113..114,117,145..146,149,152,183..184,187,190..191)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          51..78
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          88..118
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          104..264
                     /region_name="HEAT"
                     /note="HEAT repeat [General function prediction only];
                     COG1413"
                     /db_xref="CDD:441023"
     Region          127..152
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          163..192
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          204..234
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          243..269
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..317
                     /gene="PPP2R1A"
                     /coded_by="XM_041483303.1:70..>1020"
                     /db_xref="GeneID:121362083"
ORIGIN      
        1 maaadgddsl ypiavlidel rnedvqlrln sikklstial algvertrse llpfltdtiy
       61 dedevllala eqlgtftalv ggpefvhcpq ppleslatve etvvrdkave slravshehs
      121 ppdleghfvp lvkrlaggdw ftsrtsacgl fsvcyprvss pvkaelrqyf rnlcsddtpm
      181 vrraaasklg efakvleleh vkseiipmfs nlasdeqdsv rllaveacvs iaqllpqeel
      241 eglvmptlrq aaedkswrvr ymvadkftel qravgpeitk tdlvgafqsl mkdceaevra
      301 aashkvkgqr prppgpg
//
LOCUS       XP_041339251             263 aa            linear   VRT 06-MAY-2021
DEFINITION  general transcription factor IIH subunit 4, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339251
VERSION     XP_041339251.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483317.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509933.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>263
                     /product="general transcription factor IIH subunit 4"
     Region          2..263
                     /region_name="Tfb2"
                     /note="Transcription factor Tfb2; cl04289"
                     /db_xref="CDD:470994"
     CDS             1..263
                     /gene="GTF2H4"
                     /coded_by="XM_041483317.1:<1..>790"
                     /codon_start=2
                     /db_xref="GeneID:121362091"
ORIGIN      
        1 eqqqsqevll elrlwhphtl pgglpgvalh pnfrqnlrva llgggkawsd dtaplgpdrh
       61 ardvpaldky aeerwevvlh fmvgspsaav sqdlaqllvq aglmksegge ppcitsagfr
      121 tlgtalssys elqvalialf sellyrfpnl vvaqvtrdsv qaaiangita eqiihflrtr
      181 ahpvmaqqsp vlpptitdqi rlwelerdrl rfsegvlynq flsqvdfevl rdharalgvl
      241 vfenparrlm vvtpaghpdv krf
//
LOCUS       XP_041339264             110 aa            linear   VRT 06-MAY-2021
DEFINITION  polyunsaturated fatty acid lipoxygenase ALOX15B-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339264
VERSION     XP_041339264.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483330.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509944.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..110
                     /product="polyunsaturated fatty acid lipoxygenase
                     ALOX15B-like"
                     /calculated_mol_wt=11295
     CDS             1..110
                     /gene="LOC121362096"
                     /coded_by="XM_041483330.1:60..392"
                     /db_xref="GeneID:121362096"
ORIGIN      
        1 mpntpgtlqr pppasedeat eellvatlps peatgallal lsvvsyegge phplgsrsqd
       61 llagaapgrl laafrarlaa vgerirarna alalpypyle pgcvqesisi
//
LOCUS       XP_041339275             328 aa            linear   VRT 06-MAY-2021
DEFINITION  ryanodine receptor 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041339275
VERSION     XP_041339275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509955.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="ryanodine receptor 1-like"
                     /calculated_mol_wt=37096
     CDS             1..328
                     /gene="LOC121362101"
                     /coded_by="XM_041483341.1:62..1048"
                     /db_xref="GeneID:121362101"
ORIGIN      
        1 mgdigglads garytemphv ievtlpmlch ylprwwergp daapqgpwat dvtgqhlnal
       61 lghilrivvn nlgideaswm krlavfaqpi vskarpellr shfiptlgrl rkragkvvae
      121 eeqlrlegka eaedaellir defsvlcrdl yalyplliry vdnsrakwlt epnedaeelf
      181 rmvgevfiyw skshnfkree qnfvvqnein nmsfltadsk skmaksgdgq gggseqersk
      241 krrrgdrysv htslivatlk kmlpiglnmc spadqelial akgryalkdt deevreflhn
      301 nlhlqdkven tgsarwqmap vlmspmsq
//
LOCUS       XP_041339293             147 aa            linear   VRT 06-MAY-2021
DEFINITION  aurora kinase B-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041339293
VERSION     XP_041339293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483359.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509966.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>147
                     /product="aurora kinase B-like"
     Region          44..>147
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..147
                     /gene="LOC121362114"
                     /coded_by="XM_041483359.1:1..>441"
                     /db_xref="GeneID:121362114"
ORIGIN      
        1 mpqvppgvtr carrrvfsle dfeagrdipq vlsgaprrvf sledfevgrp lgkgkfgnvy
       61 larerrsgfl valkvlfksq veqegvehql rreieiqahl rhpnvlrlyn yfhdrrrvfl
      121 ilefapwgel ykelqrcrrl datrtat
//
LOCUS       XP_041339303             120 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import receptor subunit TOM40B-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339303
VERSION     XP_041339303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509976.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..120
                     /product="mitochondrial import receptor subunit
                     TOM40B-like"
     Region          <15..120
                     /region_name="Porin3"
                     /note="Eukaryotic porin family that forms channels in the
                     mitochondrial outer membrane; cl03224"
                     /db_xref="CDD:470762"
     CDS             1..120
                     /gene="LOC121362123"
                     /coded_by="XM_041483369.1:<1..363"
                     /db_xref="GeneID:121362123"
ORIGIN      
        1 ghlgdtcgrc lsvaapnwvt tlnvgyggah asyyhraneq vqvgvelean trlqessfaf
       61 gyqlslpran vvfrglldsn wsvggvlekk lpplpvtlal gaflnhwrsr fhcgfsvtvg
//
LOCUS       XP_041339314             437 aa            linear   VRT 06-MAY-2021
DEFINITION  ryanodine receptor 1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041339314
VERSION     XP_041339314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509977.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..437
                     /product="ryanodine receptor 1-like"
     Region          <1..63
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     CDS             1..437
                     /gene="LOC121362130"
                     /coded_by="XM_041483380.1:<1..1314"
                     /db_xref="GeneID:121362130"
ORIGIN      
        1 lqscpmllak gypdigwnpc ggekyldflr favfvngesv eenanvvvrl lirrpecfgp
       61 alrgeggsgl laaiqdalsi aqdpardgps grrerrpfgp eeppeenrvh lghaimsfya
      121 alidllgrca pemhliqagk gealrirail rslvpledlv giislplqip algkdgnvve
      181 prmaasfvpe hkapmvlfld rvygvqnqef llhvlevgfl pdmraaasld tatfsttema
      241 lalnrylcla vmplitkcap lfagtehrai mvdsmlhtiy rlsrgraltk aqrdaieecl
      301 malcryirps mlqhllrrlv fdvpilnefa kmplklltnh yercwryycl psgwpnmgvs
      361 seeelhltrk lfwgifdsla hkkfeaelyk lampclcaia galppdyvda syssrtekka
      421 svdaegnfdp kpvetlk
//
LOCUS       XP_041339325             566 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: N-acetylgalactosamine-6-sulfatase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339325
VERSION     XP_041339325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483391.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..566
                     /product="LOW QUALITY PROTEIN:
                     N-acetylgalactosamine-6-sulfatase"
                     /calculated_mol_wt=62129
     Region          75..538
                     /region_name="GALNS"
                     /note="galactosamine-6-sulfatase; also known as
                     N-acetylgalactosamine-6-sulfatase (GALNS); cd16157"
                     /db_xref="CDD:293776"
     Site            order(82..83,122,151,183,185,208,280,332..333,354..355)
                     /site_type="active"
                     /db_xref="CDD:293776"
     Site            order(86,91..93,95..97,111,113,294..296,381,464..468,487,
                     489..490,495..496)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293776"
     Site            order(122,151,183,185,208,280,354..355)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293776"
     CDS             1..566
                     /gene="GALNS"
                     /coded_by="XM_041483391.1:1..1701"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121362139"
ORIGIN      
        1 mhtailapxp pghvrragrg hvrragrghv rragrghvwr gpvamasaal gprglrwalg
       61 plglcwalgp aaatnivlll mddmgwgdlg afgepsketp nldqmaaegm lfldfytasp
      121 lcspsraall tgrlpvrngf yttngharna ytpqdivggi pdselllpel lkkagytnki
      181 igkwhlghrp qfhplkhgfd ewfgspnchf gpynsterpn ipiyrdwemv gryyedfkid
      241 lktgeanltq lylqealdfi skqqasqqpf flywaidath apvyaskqfl gtsqrglygd
      301 avreiddsvg kilkhlqqlg isentfvfft sdngaalisa pkqggsngpf lcgkqttfeg
      361 gmrepaiaww pghvpaggvs hqlgsvmdlf stslslaglq ppsdrqidgi dllpvilqgk
      421 lidrpifyyr gnelmavrag lykahywtws nsweehgkgi dfcpgqsvag vtthtqeeht
      481 hlpllfhlgr dpgekyplsf aseeyqrave hisglvqqhk atlvpgqpql nvcdqavmnw
      541 appgceklgk clkapesdpk kcswph
//
LOCUS       XP_041339339             200 aa            linear   VRT 06-MAY-2021
DEFINITION  adenine phosphoribosyltransferase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339339
VERSION     XP_041339339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483405.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="adenine phosphoribosyltransferase isoform X1"
                     /calculated_mol_wt=21057
     Region          43..200
                     /region_name="PRK02304"
                     /note="adenine phosphoribosyltransferase; Provisional"
                     /db_xref="CDD:235028"
     Site            order(85,87,147..149,151..155,179)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..200
                     /gene="APRT"
                     /coded_by="XM_041483405.1:865..1467"
                     /db_xref="GeneID:121362148"
ORIGIN      
        1 mgavgapgpa qgsvtpgavg pgpgavllsl iptnrfnkhr ttpgvhtsdi spllkdpvaf
       61 rtlidlledh vkasfpkidf ivgldsrgfl igtplaqrlg igfvpvrkkg klpgatesis
      121 ysleygkael eiqsdalepg qkvvvvddll atggtmcaac ellkrlkaei leclviielk
      181 alkgseklns ipfysllqyd
//
LOCUS       XP_041339348             179 aa            linear   VRT 06-MAY-2021
DEFINITION  adenine phosphoribosyltransferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339348
VERSION     XP_041339348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483414.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="adenine phosphoribosyltransferase isoform X2"
                     /calculated_mol_wt=19684
     Region          9..179
                     /region_name="PRK02304"
                     /note="adenine phosphoribosyltransferase; Provisional"
                     /db_xref="CDD:235028"
     Site            order(64,66,126..128,130..134,158)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..179
                     /gene="APRT"
                     /coded_by="XM_041483414.1:85..624"
                     /db_xref="GeneID:121362148"
ORIGIN      
        1 msderlravr drvrpfpdfp epgvlfrdis pllkdpvafr tlidlledhv kasfpkidfi
       61 vgldsrgfli gtplaqrlgi gfvpvrkkgk lpgatesisy sleygkaele iqsdalepgq
      121 kvvvvddlla tggtmcaace llkrlkaeil eclviielka lkgseklnsi pfysllqyd
//
LOCUS       XP_041339360             139 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking protein particle complex subunit 2-like protein isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339360
VERSION     XP_041339360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="trafficking protein particle complex subunit
                     2-like protein isoform X1"
                     /calculated_mol_wt=15936
     Region          3..135
                     /region_name="TRAPPC2L"
                     /note="Trafficking protein particle complex subunit
                     2-like; cd14854"
                     /db_xref="CDD:341444"
     CDS             1..139
                     /gene="TRAPPC2L"
                     /coded_by="XM_041483426.1:70..489"
                     /db_xref="GeneID:121362158"
ORIGIN      
        1 mavciaviak enyplyirsv ptenelkfhy tvhtsldvvd ekisamgkal vdqrelylgl
       61 lyptedykvy gyvtnskvkf vmvvdssnta lrdneirsmf rklhnsytdi mcnpfynpgd
      121 rihsrafdtm vnsmmmqvc
//
LOCUS       XP_041339370             118 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking protein particle complex subunit 2-like protein isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339370
VERSION     XP_041339370.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483436.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="trafficking protein particle complex subunit
                     2-like protein isoform X2"
                     /calculated_mol_wt=13314
     Region          3..>69
                     /region_name="longin-like"
                     /note="Longin-like domains; cl38905"
                     /db_xref="CDD:365781"
     CDS             1..118
                     /gene="TRAPPC2L"
                     /coded_by="XM_041483436.1:70..426"
                     /db_xref="GeneID:121362158"
ORIGIN      
        1 mavciaviak enyplyirsv ptenelkfhy tvhtsldvvd ekisamgkal vdqrelylgl
       61 lyptedykvs ltpaqvwlrd qlqgevchgg gflqhspegq rdpqyvpkaa qflhrhhv
//
LOCUS       XP_041339382            2460 aa            linear   VRT 06-MAY-2021
DEFINITION  piezo-type mechanosensitive ion channel component 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339382
VERSION     XP_041339382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483448.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2460
                     /product="piezo-type mechanosensitive ion channel
                     component 1 isoform X1"
                     /calculated_mol_wt=283558
     Region          1200..1414
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     Region          2047..2458
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2460
                     /gene="PIEZO1"
                     /coded_by="XM_041483448.1:113..7495"
                     /db_xref="GeneID:121362167"
ORIGIN      
        1 mnrrglcqgl ywlllplall aaclfrynvl slvyllflll lpwfpgpssr fttghssril
       61 kallgisilf llahlvfqic lytlpvldql lgpscsswev larhigvtrl dlsdilnsvr
      121 lvapdvgill vsslslclcr rlspapsrgn peslessewr eekdagrqrr aahrdsrlrs
      181 rlrdkahsll weagkglsil llalagitlp sasssvyfll fmglctwwac hlpsshqafn
      241 vfcilvgiys achllclyay qtpfvqgvfp pptiwarvfg fkdiilyync sqpntldlnn
      301 shpwpvyanp gvllllyytv atlvklrwrd akrtvaparp rprdlveles wpqdthrvae
      361 dtkpmlypst gkpgtstenc tvhvlntrrr hpsawlplrs lghvlmkqsy vsaliammvw
      421 simyhswltf vlllwacliw tvrsrrhfam lcspflvlya ialcslqyvw amdvvaelpt
      481 hisfmhlqpl glvhpnypcm algakllltl tfwmllrrfv tekvltrrap atpllevsva
      541 etetsqmrdv lhklgevvrn ffakfwicvc aakfivvtfa grlvlykivy mlllllclml
      601 fqvyyslwrk vlkgfwwlvv aytmlvliat ytyqfedfpm ywrnitglnd dqlsdmglqq
      661 fsvsklfssi lmmgffllac ilqlhyfhep fmlitdlqhi rppspapdhi prseelhgsr
      721 llrdvasaet awsrdsdtas lasnkwglvl erlvvlgraf sdrvtrgevf mrrllelhvv
      781 klvalytvwv aleevsvmnf llvllwtlav pycrfrhmas clstvwtcii ivckmlyqle
      841 vvdpheyfsn ctqplpngtn ltpeelgnst lyrgpvdpan wfgirkgfpn wgyvknhlqv
      901 llllvfeavv yrrqqyhrkq hqlvapvtet vfedisrehl dlglvscaky finyfyykfg
      961 leicflmmvn vigqrmnfvv ilhgcwlvvm ltrrrraaia rlwpkyclfl viyfiyqyll
     1021 clgippalcm dypwrwsnti plnsalvkwl ylpdffeapk stnlindfll llcvaqqwrv
     1081 feaersepwl qaagdnsdrl dreqehhnpt pnfiycksyl dmvkvvvfhy ffwvvlvvvf
     1141 itgtnrislf glgyvlacfy lllsgtamlr kpararlvlw dclilyniav iisknmlsll
     1201 scvfvqqmqs rfcwviqlfs lvctvkgyyn pkampkdhdc tlpveeagii wdsicfffll
     1261 lqrriflssy ylhvmwnlra salqasrgva lfkasilksl rshrqaerks ldqlkrqmer
     1321 irakqqkyhq elatsagqeg araapggpad psrqrerwwr pwldhaavlh sgeyflfesd
     1381 seeeeevqee prpgrpsafq layqawvtnt rtvlqqqeqp eqprppttds aagdgtrrev
     1441 eaaegaegqe eedgqssers nvlqrvlnml rflwllcqal vdgltqwlds qtrehtdmsq
     1501 vlclerfvma erlargeein qefpdelyer ellpeellqk lsspgslaae lqsstssnqe
     1561 qvinvedvad aqqflavpqq rrrtasellk srrlcvsele eserfyrshn rflklllagy
     1621 rfgtghsell cyftiilnnm vtgsvislfl pilvflwaml ssprptkrfw vtaivftemm
     1681 vvvkylfqfg ffpwngyitl lrnegkpffp prilgleksi hyikydllql lalffhrsll
     1741 lsyglwdqek ttdkkdeske geekpeeavs lqpevaeegl eapaqpgale aaselqlele
     1801 gesveqeegt eatqlrfrrk qrrkttemvp vegpeeeeee eeeeevsees haqrklkafg
     1861 lrvkgffltt aqnvyqpvcq fcrdildtqs raatdvyaym fladvvdfii iifgfwafgk
     1921 ytaaaditss lsenqvpkaf lfmllfqfst mvidralylr ktvlgklvfq vtlvfgihiw
     1981 mffilpyvtq rlfrqntvaq lwyfvkciyf glsayqircg yptrilgnfl tkkynhlnlf
     2041 lfqgfrlvpf lvelravmdw vwtdttlsls nwmcvediya nifiikcsre tekkypqpkg
     2101 qkkkkvvkyg mggliilflv giiwfpllfm slvrsvvgii nhpidvtvtl klggyeplfs
     2161 tssqqqyiqp ftsqdyeelt kefeseplam qfislydved ivtariegss gslwsvspps
     2221 reqmrlelqn gssditlhfn wifqrdlgkg gtvenaygkh dtdlepgapq rlqlaqlldg
     2281 trkepvelln lfpkyirapt gleaepikql lpddedsyld vevhlkqerr gsgpgehfve
     2341 wwvlrqknap pqegnilpmi ifndkvspps lgflagygim glyvsvvlvi gkfvrgffse
     2401 vshsimfeel pyvdrilklc qdiflvretg eleleeelya kliflyrspe tmikwtreke
//
LOCUS       XP_041339392            2435 aa            linear   VRT 06-MAY-2021
DEFINITION  piezo-type mechanosensitive ion channel component 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339392
VERSION     XP_041339392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2435
                     /product="piezo-type mechanosensitive ion channel
                     component 1 isoform X2"
                     /calculated_mol_wt=280982
     Region          1200..1414
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     Region          2022..2433
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2435
                     /gene="PIEZO1"
                     /coded_by="XM_041483458.1:113..7420"
                     /db_xref="GeneID:121362167"
ORIGIN      
        1 mnrrglcqgl ywlllplall aaclfrynvl slvyllflll lpwfpgpssr fttghssril
       61 kallgisilf llahlvfqic lytlpvldql lgpscsswev larhigvtrl dlsdilnsvr
      121 lvapdvgill vsslslclcr rlspapsrgn peslessewr eekdagrqrr aahrdsrlrs
      181 rlrdkahsll weagkglsil llalagitlp sasssvyfll fmglctwwac hlpsshqafn
      241 vfcilvgiys achllclyay qtpfvqgvfp pptiwarvfg fkdiilyync sqpntldlnn
      301 shpwpvyanp gvllllyytv atlvklrwrd akrtvaparp rprdlveles wpqdthrvae
      361 dtkpmlypst gkpgtstenc tvhvlntrrr hpsawlplrs lghvlmkqsy vsaliammvw
      421 simyhswltf vlllwacliw tvrsrrhfam lcspflvlya ialcslqyvw amdvvaelpt
      481 hisfmhlqpl glvhpnypcm algakllltl tfwmllrrfv tekvltrrap atpllevsva
      541 etetsqmrdv lhklgevvrn ffakfwicvc aakfivvtfa grlvlykivy mlllllclml
      601 fqvyyslwrk vlkgfwwlvv aytmlvliat ytyqfedfpm ywrnitglnd dqlsdmglqq
      661 fsvsklfssi lmmgffllac ilqlhyfhep fmlitdlqhi rppspapdhi prseelhgsr
      721 llrdvasaet awsrdsdtas lasnkwglvl erlvvlgraf sdrvtrgevf mrrllelhvv
      781 klvalytvwv aleevsvmnf llvllwtlav pycrfrhmas clstvwtcii ivckmlyqle
      841 vvdpheyfsn ctqplpngtn ltpeelgnst lyrgpvdpan wfgirkgfpn wgyvknhlqv
      901 llllvfeavv yrrqqyhrkq hqlvapvtet vfedisrehl dlglvscaky finyfyykfg
      961 leicflmmvn vigqrmnfvv ilhgcwlvvm ltrrrraaia rlwpkyclfl viyfiyqyll
     1021 clgippalcm dypwrwsnti plnsalvkwl ylpdffeapk stnlindfll llcvaqqwrv
     1081 feaersepwl qaagdnsdrl dreqehhnpt pnfiycksyl dmvkvvvfhy ffwvvlvvvf
     1141 itgtnrislf glgyvlacfy lllsgtamlr kpararlvlw dclilyniav iisknmlsll
     1201 scvfvqqmqs rfcwviqlfs lvctvkgyyn pkampkdhdc tlpveeagii wdsicfffll
     1261 lqrriflssy ylhvmwnlra salqasrgva lfkasilksl rshrqaerks ldqlkrqmer
     1321 irakqqkyhq elatsagqeg araapggpad psrqrerwwr pwldhaavlh sgeyflfesd
     1381 seeeeevqee prpgrpsafq layqawvtnt rtvlqqqeqp eqprppttds aaersnvlqr
     1441 vlnmlrflwl lcqalvdglt qwldsqtreh tdmsqvlcle rfvmaerlar geeinqefpd
     1501 elyerellpe ellqklsspg slaaelqsst ssnqeqvinv edvadaqqfl avpqqrrrta
     1561 sellksrrlc vseleeserf yrshnrflkl llagyrfgtg hsellcyfti ilnnmvtgsv
     1621 islflpilvf lwamlssprp tkrfwvtaiv ftemmvvvky lfqfgffpwn gyitllrneg
     1681 kpffpprilg leksihyiky dllqllalff hrslllsygl wdqekttdkk deskegeekp
     1741 eeavslqpev aeegleapaq pgaleaasel qlelegesve qeegteatql rfrrkqrrkt
     1801 temvpvegpe eeeeeeeeee vseeshaqrk lkafglrvkg fflttaqnvy qpvcqfcrdi
     1861 ldtqsraatd vyaymfladv vdfiiiifgf wafgkytaaa ditsslsenq vpkaflfmll
     1921 fqfstmvidr alylrktvlg klvfqvtlvf gihiwmffil pyvtqrlfrq ntvaqlwyfv
     1981 kciyfglsay qircgyptri lgnfltkkyn hlnlflfqgf rlvpflvelr avmdwvwtdt
     2041 tlslsnwmcv ediyanifii kcsretekky pqpkgqkkkk vvkygmggli ilflvgiiwf
     2101 pllfmslvrs vvgiinhpid vtvtlklggy eplfstssqq qyiqpftsqd yeeltkefes
     2161 eplamqfisl ydvedivtar iegssgslws vsppsreqmr lelqngssdi tlhfnwifqr
     2221 dlgkggtven aygkhdtdle pgapqrlqla qlldgtrkep vellnlfpky iraptgleae
     2281 pikqllpdde dsyldvevhl kqerrgsgpg ehfvewwvlr qknappqegn ilpmiifndk
     2341 vsppslgfla gygimglyvs vvlvigkfvr gffsevshsi mfeelpyvdr ilklcqdifl
     2401 vretgelele eelyaklifl yrspetmikw treke
//
LOCUS       XP_041339399            2432 aa            linear   VRT 06-MAY-2021
DEFINITION  piezo-type mechanosensitive ion channel component 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339399
VERSION     XP_041339399.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483465.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2432
                     /product="piezo-type mechanosensitive ion channel
                     component 1 isoform X3"
                     /calculated_mol_wt=280441
     Region          1200..1414
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     Region          2019..2430
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2432
                     /gene="PIEZO1"
                     /coded_by="XM_041483465.1:113..7411"
                     /db_xref="GeneID:121362167"
ORIGIN      
        1 mnrrglcqgl ywlllplall aaclfrynvl slvyllflll lpwfpgpssr fttghssril
       61 kallgisilf llahlvfqic lytlpvldql lgpscsswev larhigvtrl dlsdilnsvr
      121 lvapdvgill vsslslclcr rlspapsrgn peslessewr eekdagrqrr aahrdsrlrs
      181 rlrdkahsll weagkglsil llalagitlp sasssvyfll fmglctwwac hlpsshqafn
      241 vfcilvgiys achllclyay qtpfvqgvfp pptiwarvfg fkdiilyync sqpntldlnn
      301 shpwpvyanp gvllllyytv atlvklrwrd akrtvaparp rprdlveles wpqdthrvae
      361 dtkpmlypst gkpgtstenc tvhvlntrrr hpsawlplrs lghvlmkqsy vsaliammvw
      421 simyhswltf vlllwacliw tvrsrrhfam lcspflvlya ialcslqyvw amdvvaelpt
      481 hisfmhlqpl glvhpnypcm algakllltl tfwmllrrfv tekvltrrap atpllevsva
      541 etetsqmrdv lhklgevvrn ffakfwicvc aakfivvtfa grlvlykivy mlllllclml
      601 fqvyyslwrk vlkgfwwlvv aytmlvliat ytyqfedfpm ywrnitglnd dqlsdmglqq
      661 fsvsklfssi lmmgffllac ilqlhyfhep fmlitdlqhi rppspapdhi prseelhgsr
      721 llrdvasaet awsrdsdtas lasnkwglvl erlvvlgraf sdrvtrgevf mrrllelhvv
      781 klvalytvwv aleevsvmnf llvllwtlav pycrfrhmas clstvwtcii ivckmlyqle
      841 vvdpheyfsn ctqplpngtn ltpeelgnst lyrgpvdpan wfgirkgfpn wgyvknhlqv
      901 llllvfeavv yrrqqyhrkq hqlvapvtet vfedisrehl dlglvscaky finyfyykfg
      961 leicflmmvn vigqrmnfvv ilhgcwlvvm ltrrrraaia rlwpkyclfl viyfiyqyll
     1021 clgippalcm dypwrwsnti plnsalvkwl ylpdffeapk stnlindfll llcvaqqwrv
     1081 feaersepwl qaagdnsdrl dreqehhnpt pnfiycksyl dmvkvvvfhy ffwvvlvvvf
     1141 itgtnrislf glgyvlacfy lllsgtamlr kpararlvlw dclilyniav iisknmlsll
     1201 scvfvqqmqs rfcwviqlfs lvctvkgyyn pkampkdhdc tlpveeagii wdsicfffll
     1261 lqrriflssy ylhvmwnlra salqasrgva lfkasilksl rshrqaerks ldqlkrqmer
     1321 irakqqkyhq elatsagqeg araapggpad psrqrerwwr pwldhaavlh sgeyflfesd
     1381 seeeeevqee prpgrpsafq layqawvtnt rtvlqqqeqp eqprppttds aagdgtrrev
     1441 eaaegaegqe eedgqssers nvlqrvlnml rflwllcqal vdgltqwlds qtrehtdmsq
     1501 vlclerfvma erlargeein qefpdelyer ellpeellqk lsspgslaae lqsstssnqe
     1561 qvinvedvad aqqflavpqq rrrtasellk srrlcvsele eserfyrshn rflklllagy
     1621 rfgtghsell cyftiilnnm vtgsvislfl pilvflwaml ssprptkrfw vtaivftemm
     1681 vvvkylfqfg ffpwngyitl lrnegkpffp prilgleksi hyikydllql lalffhrsll
     1741 lsyglwdqek ttdkkdeske geekpeeavs lqpevaeegl eapaqpgale aaselqlele
     1801 gesveqeegt eatqlrfrrk qrrkttemvp vegpeeeeee eeeeevsees haqrklkafg
     1861 lrvkgffltt aqnvyqpvcq fcrdildtqs raatdvyaym fladvvdfii iifgfwafgf
     1921 stmvidraly lrktvlgklv fqvtlvfgih iwmffilpyv tqrlfrqntv aqlwyfvkci
     1981 yfglsayqir cgyptrilgn fltkkynhln lflfqgfrlv pflvelravm dwvwtdttls
     2041 lsnwmcvedi yanifiikcs retekkypqp kgqkkkkvvk ygmggliilf lvgiiwfpll
     2101 fmslvrsvvg iinhpidvtv tlklggyepl fstssqqqyi qpftsqdyee ltkefesepl
     2161 amqfislydv edivtarieg ssgslwsvsp psreqmrlel qngssditlh fnwifqrdlg
     2221 kggtvenayg khdtdlepga pqrlqlaqll dgtrkepvel lnlfpkyira ptgleaepik
     2281 qllpddedsy ldvevhlkqe rrgsgpgehf vewwvlrqkn appqegnilp miifndkvsp
     2341 pslgflagyg imglyvsvvl vigkfvrgff sevshsimfe elpyvdrilk lcqdiflvre
     2401 tgeleleeel yakliflyrs petmikwtre ke
//
LOCUS       XP_041339408            2367 aa            linear   VRT 06-MAY-2021
DEFINITION  piezo-type mechanosensitive ion channel component 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339408
VERSION     XP_041339408.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483474.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2367
                     /product="piezo-type mechanosensitive ion channel
                     component 1 isoform X4"
                     /calculated_mol_wt=272834
     Region          1107..1321
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     Region          1954..2365
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2367
                     /gene="PIEZO1"
                     /coded_by="XM_041483474.1:167..7270"
                     /db_xref="GeneID:121362167"
ORIGIN      
        1 mpvhtarpgp aagaqlldls dilnsvrlva pdvgillvss lslclcrrls papsrgnpes
       61 lessewreek dagrqrraah rdsrlrsrlr dkahsllwea gkglsillla lagitlpsas
      121 ssvyfllfmg lctwwachlp sshqafnvfc ilvgiysach llclyayqtp fvqgvfpppt
      181 iwarvfgfkd iilyyncsqp ntldlnnshp wpvyanpgvl lllyytvatl vklrwrdakr
      241 tvaparprpr dlveleswpq dthrvaedtk pmlypstgkp gtstenctvh vlntrrrhps
      301 awlplrslgh vlmkqsyvsa liammvwsim yhswltfvll lwacliwtvr srrhfamlcs
      361 pflvlyaial cslqyvwamd vvaelpthis fmhlqplglv hpnypcmalg akllltltfw
      421 mllrrfvtek vltrrapatp llevsvaete tsqmrdvlhk lgevvrnffa kfwicvcaak
      481 fivvtfagrl vlykivymll lllclmlfqv yyslwrkvlk gfwwlvvayt mlvliatyty
      541 qfedfpmywr nitglnddql sdmglqqfsv sklfssilmm gffllacilq lhyfhepfml
      601 itdlqhirpp spapdhiprs eelhgsrllr dvasaetaws rdsdtaslas nkwglvlerl
      661 vvlgrafsdr vtrgevfmrr llelhvvklv alytvwvale evsvmnfllv llwtlavpyc
      721 rfrhmascls tvwtciiivc kmlyqlevvd pheyfsnctq plpngtnltp eelgnstlyr
      781 gpvdpanwfg irkgfpnwgy vknhlqvlll lvfeavvyrr qqyhrkqhql vapvtetvfe
      841 disrehldlg lvscakyfin yfyykfglei cflmmvnvig qrmnfvvilh gcwlvvmltr
      901 rrraaiarlw pkyclflviy fiyqyllclg ippalcmdyp wrwsntipln salvkwlylp
      961 dffeapkstn lindfllllc vaqqwrvfea ersepwlqaa gdnsdrldre qehhnptpnf
     1021 iycksyldmv kvvvfhyffw vvlvvvfitg tnrislfglg yvlacfylll sgtamlrkpa
     1081 rarlvlwdcl ilyniaviis knmlsllscv fvqqmqsrfc wviqlfslvc tvkgyynpka
     1141 mpkdhdctlp veeagiiwds icffflllqr riflssyylh vmwnlrasal qasrgvalfk
     1201 asilkslrsh rqaerksldq lkrqmerira kqqkyhqela tsagqegara apggpadpsr
     1261 qrerwwrpwl dhaavlhsge yflfesdsee eeevqeeprp grpsafqlay qawvtntrtv
     1321 lqqqeqpeqp rppttdsaag dgtrreveaa egaegqeeed gqssersnvl qrvlnmlrfl
     1381 wllcqalvdg ltqwldsqtr ehtdmsqvlc lerfvmaerl argeeinqef pdelyerell
     1441 peellqklss pgslaaelqs stssnqeqvi nvedvadaqq flavpqqrrr tasellksrr
     1501 lcvseleese rfyrshnrfl klllagyrfg tghsellcyf tiilnnmvtg svislflpil
     1561 vflwamlssp rptkrfwvta ivftemmvvv kylfqfgffp wngyitllrn egkpffppri
     1621 lgleksihyi kydllqllal ffhrslllsy glwdqekttd kkdeskegee kpeeavslqp
     1681 evaeegleap aqpgaleaas elqleleges veqeegteat qlrfrrkqrr kttemvpveg
     1741 peeeeeeeee eevseeshaq rklkafglrv kgfflttaqn vyqpvcqfcr dildtqsraa
     1801 tdvyaymfla dvvdfiiiif gfwafgkyta aaditsslse nqvpkaflfm llfqfstmvi
     1861 dralylrktv lgklvfqvtl vfgihiwmff ilpyvtqrlf rqntvaqlwy fvkciyfgls
     1921 ayqircgypt rilgnfltkk ynhlnlflfq gfrlvpflve lravmdwvwt dttlslsnwm
     1981 cvediyanif iikcsretek kypqpkgqkk kkvvkygmgg liilflvgii wfpllfmslv
     2041 rsvvgiinhp idvtvtlklg gyeplfstss qqqyiqpfts qdyeeltkef eseplamqfi
     2101 slydvedivt ariegssgsl wsvsppsreq mrlelqngss ditlhfnwif qrdlgkggtv
     2161 enaygkhdtd lepgapqrlq laqlldgtrk epvellnlfp kyiraptgle aepikqllpd
     2221 dedsyldvev hlkqerrgsg pgehfvewwv lrqknappqe gnilpmiifn dkvsppslgf
     2281 lagygimgly vsvvlvigkf vrgffsevsh simfeelpyv drilklcqdi flvretgele
     2341 leeelyakli flyrspetmi kwtreke
//
LOCUS       XP_041339417            2055 aa            linear   VRT 06-MAY-2021
DEFINITION  piezo-type mechanosensitive ion channel component 1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339417
VERSION     XP_041339417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2055
                     /product="piezo-type mechanosensitive ion channel
                     component 1 isoform X5"
                     /calculated_mol_wt=237961
     Region          795..1009
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     Region          1642..2053
                     /region_name="Piezo_RRas_bdg"
                     /note="Piezo non-specific cation channel, R-Ras-binding
                     domain; pfam12166"
                     /db_xref="CDD:463481"
     CDS             1..2055
                     /gene="PIEZO1"
                     /coded_by="XM_041483483.1:101..6268"
                     /db_xref="GeneID:121362167"
ORIGIN      
        1 mkqsyvsali ammvwsimyh swltfvlllw acliwtvrsr rhfamlcspf lvlyaialcs
       61 lqyvwamdvv aelpthisfm hlqplglvhp nypcmalgak llltltfwml lrrfvtekvl
      121 trrapatpll evsvaetets qmrdvlhklg evvrnffakf wicvcaakfi vvtfagrlvl
      181 ykivymllll lclmlfqvyy slwrkvlkgf wwlvvaytml vliatytyqf edfpmywrni
      241 tglnddqlsd mglqqfsvsk lfssilmmgf fllacilqlh yfhepfmlit dlqhirppsp
      301 apdhiprsee lhgsrllrdv asaetawsrd sdtaslasnk wglvlerlvv lgrafsdrvt
      361 rgevfmrrll elhvvklval ytvwvaleev svmnfllvll wtlavpycrf rhmasclstv
      421 wtciiivckm lyqlevvdph eyfsnctqpl pngtnltpee lgnstlyrgp vdpanwfgir
      481 kgfpnwgyvk nhlqvllllv feavvyrrqq yhrkqhqlva pvtetvfedi srehldlglv
      541 scakyfinyf yykfgleicf lmmvnvigqr mnfvvilhgc wlvvmltrrr raaiarlwpk
      601 yclflviyfi yqyllclgip palcmdypwr wsntiplnsa lvkwlylpdf feapkstnli
      661 ndfllllcva qqwrvfeaer sepwlqaagd nsdrldreqe hhnptpnfiy cksyldmvkv
      721 vvfhyffwvv lvvvfitgtn rislfglgyv lacfylllsg tamlrkpara rlvlwdclil
      781 yniaviiskn mlsllscvfv qqmqsrfcwv iqlfslvctv kgyynpkamp kdhdctlpve
      841 eagiiwdsic ffflllqrri flssyylhvm wnlrasalqa srgvalfkas ilkslrshrq
      901 aerksldqlk rqmerirakq qkyhqelats agqegaraap ggpadpsrqr erwwrpwldh
      961 aavlhsgeyf lfesdseeee evqeeprpgr psafqlayqa wvtntrtvlq qqeqpeqprp
     1021 pttdsaagdg trreveaaeg aegqeeedgq ssersnvlqr vlnmlrflwl lcqalvdglt
     1081 qwldsqtreh tdmsqvlcle rfvmaerlar geeinqefpd elyerellpe ellqklsspg
     1141 slaaelqsst ssnqeqvinv edvadaqqfl avpqqrrrta sellksrrlc vseleeserf
     1201 yrshnrflkl llagyrfgtg hsellcyfti ilnnmvtgsv islflpilvf lwamlssprp
     1261 tkrfwvtaiv ftemmvvvky lfqfgffpwn gyitllrneg kpffpprilg leksihyiky
     1321 dllqllalff hrslllsygl wdqekttdkk deskegeekp eeavslqpev aeegleapaq
     1381 pgaleaasel qlelegesve qeegteatql rfrrkqrrkt temvpvegpe eeeeeeeeee
     1441 vseeshaqrk lkafglrvkg fflttaqnvy qpvcqfcrdi ldtqsraatd vyaymfladv
     1501 vdfiiiifgf wafgkytaaa ditsslsenq vpkaflfmll fqfstmvidr alylrktvlg
     1561 klvfqvtlvf gihiwmffil pyvtqrlfrq ntvaqlwyfv kciyfglsay qircgyptri
     1621 lgnfltkkyn hlnlflfqgf rlvpflvelr avmdwvwtdt tlslsnwmcv ediyanifii
     1681 kcsretekky pqpkgqkkkk vvkygmggli ilflvgiiwf pllfmslvrs vvgiinhpid
     1741 vtvtlklggy eplfstssqq qyiqpftsqd yeeltkefes eplamqfisl ydvedivtar
     1801 iegssgslws vsppsreqmr lelqngssdi tlhfnwifqr dlgkggtven aygkhdtdle
     1861 pgapqrlqla qlldgtrkep vellnlfpky iraptgleae pikqllpdde dsyldvevhl
     1921 kqerrgsgpg ehfvewwvlr qknappqegn ilpmiifndk vsppslgfla gygimglyvs
     1981 vvlvigkfvr gffsevshsi mfeelpyvdr ilklcqdifl vretgelele eelyaklifl
     2041 yrspetmikw treke
//
LOCUS       XP_041339432             472 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic tRNA 2-thiolation protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339432
VERSION     XP_041339432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="cytoplasmic tRNA 2-thiolation protein 2"
                     /calculated_mol_wt=52042
     Region          62..>173
                     /region_name="TilS"
                     /note="tRNA(Ile)-lysidine synthase TilS/MesJ [Translation,
                     ribosomal structure and biogenesis]; COG0037"
                     /db_xref="CDD:439807"
     Region          345..435
                     /region_name="CTU2"
                     /note="Cytoplasmic tRNA 2-thiolation protein 2; pfam10288"
                     /db_xref="CDD:463044"
     CDS             1..472
                     /gene="CTU2"
                     /coded_by="XM_041483498.1:181..1599"
                     /db_xref="GeneID:121362188"
ORIGIN      
        1 mcdmaggggg cgadaepprr rrapadshpr tcmkcgqgta alvirvgdpf crdcfreyfv
       61 hkframlgkn rvifpgekvl lavsggpasc amvrqvqegl sreaakrlrf vpslvyveeg
      121 avrrqspeqr eqtlaqmetl lqatgfpyhl ihleealelp psilqpgper aaasspsgps
      181 ykeavdnfiq qqrqdgdsgt slpghstpdt pagalatprl pdaaqtqell rsfeaaatat
      241 areellemlr thlivqtard rgyakvmmge sltrvaikll tnlslgrgaf lavdtgftdq
      301 rhgdvmvvrp mrdytakeia fynrffgvpt vtvpplftkr reklsihqlv erfllglqee
      361 fpstistvyr tgeklspepa kassewqrcl lclcgldtyg eeelaleptl ifeepaagve
      421 skaayipllc yscrltfkel gpldtlppyv raegqrrirr aemeqnqear es
//
LOCUS       XP_041339446             449 aa            linear   VRT 06-MAY-2021
DEFINITION  piezo-type mechanosensitive ion channel component 1-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339446
VERSION     XP_041339446.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483512.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..449
                     /product="piezo-type mechanosensitive ion channel
                     component 1-like isoform X1"
                     /calculated_mol_wt=51240
     Region          79..293
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     CDS             1..449
                     /gene="LOC121362195"
                     /coded_by="XM_041483512.1:291..1640"
                     /db_xref="GeneID:121362195"
ORIGIN      
        1 mvkvvvfhyf fwvvlvvvfi tgtnrislfg lgyvlacfyl llsgtamlrk pararlvlwd
       61 clilyniavi isknmlslls cvfvqqmqsr fcwviqlfsl vctvkgyynp kampkdhdct
      121 lpveeagiiw dsicffflll qrriflssyy lhvmwnlras alqasrgval fkasilkslr
      181 shrqaerksl dqlkrqmeri rakqqkyhqe latsagqega raapggpadp srqrerwwrp
      241 wldhaavlhs geyflfesds eeeeevqeep rpgrpsafql ayqawvtntr tvlqqqeqpe
      301 qprppttdsa agdgtrreve aaegaegqee edgqssersn vlqrvlnmlr flwllcqalv
      361 dgltqwldsq trehtdmsqv lclerfvmae rlargeeinq efpdelyere llpeellqkl
      421 sspgslaael qsstsrqqpg agdkrggrg
//
LOCUS       XP_041339457             377 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339457
VERSION     XP_041339457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="translation initiation factor IF-2-like isoform
                     X2"
                     /calculated_mol_wt=39375
     Region          79..>111
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     Region          <177..349
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..377
                     /gene="LOC121362195"
                     /coded_by="XM_041483523.1:289..1422"
                     /db_xref="GeneID:121362195"
ORIGIN      
        1 mvkvvvfhyf fwvvlvvvfi tgtnrislfg lgyvlacfyl llsgtamlrk pararlvlwd
       61 clilyniavi isknmlslls cvfvqqmqsr fcwviqlfsl vctvkgyynr daqgprlhaa
      121 rgggrhhlgq hllllppapa phlpqlllla rhveppslcp agfqgrgtvq gqhleepala
      181 pasreevagp aeaadgadps qaaevppgag hqrgagrsqs ssrrpgrpvp aegavvaamv
      241 rprrsaafrg ilplrvgqrg ggrgaggata geaerlparl pglgdqhqdg aaaagaaraa
      301 eathhrqrcr aqqrlaagse haevpvaavp gpggradpva gqpnpgahgh vagpvpreic
      361 hggaagqgrg dkpgvpr
//
LOCUS       XP_041339466             377 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339466
VERSION     XP_041339466.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483532.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="translation initiation factor IF-2-like isoform
                     X2"
                     /calculated_mol_wt=39375
     Region          79..>111
                     /region_name="PIEZO"
                     /note="Piezo; pfam15917"
                     /db_xref="CDD:464941"
     Region          <177..349
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..377
                     /gene="LOC121362195"
                     /coded_by="XM_041483532.1:290..1423"
                     /db_xref="GeneID:121362195"
ORIGIN      
        1 mvkvvvfhyf fwvvlvvvfi tgtnrislfg lgyvlacfyl llsgtamlrk pararlvlwd
       61 clilyniavi isknmlslls cvfvqqmqsr fcwviqlfsl vctvkgyynr daqgprlhaa
      121 rgggrhhlgq hllllppapa phlpqlllla rhveppslcp agfqgrgtvq gqhleepala
      181 pasreevagp aeaadgadps qaaevppgag hqrgagrsqs ssrrpgrpvp aegavvaamv
      241 rprrsaafrg ilplrvgqrg ggrgaggata geaerlparl pglgdqhqdg aaaagaaraa
      301 eathhrqrcr aqqrlaagse haevpvaavp gpggradpva gqpnpgahgh vagpvpreic
      361 hggaagqgrg dkpgvpr
//
LOCUS       XP_041339477             776 aa            linear   VRT 06-MAY-2021
DEFINITION  paraplegin [Pyrgilauda ruficollis].
ACCESSION   XP_041339477
VERSION     XP_041339477.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483543.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="paraplegin"
                     /calculated_mol_wt=86295
     Region          125..729
                     /region_name="HflB"
                     /note="ATP-dependent Zn proteases [Posttranslational
                     modification, protein turnover, chaperones]; COG0465"
                     /db_xref="CDD:440233"
     CDS             1..776
                     /gene="SPG7"
                     /coded_by="XM_041483543.1:171..2501"
                     /db_xref="GeneID:121362207"
ORIGIN      
        1 malllrmgll rgrcafwrpp aaawarprgc alggvrglqs llaptlslpr qglggvltkq
       61 liirdpvrlw nllgstswfa tsssrgssqk nggfkkkspq eedeeekrrr renqmhlerl
      121 rallvltfvv lmlrfmisen regtniswny fvnemlakge vqrievvpes diveiylhpg
      181 gtphgqvnvt llytmrvani dkfeeklrav edelnidekd ripisykhpg fygndvlsli
      241 vtlvavsmlw sifrlfrvas raggfnafnq lkmarftivd gksgkgigfk dvagmheakm
      301 evkefvdylk npdrylqlga kvpkgalllg ppgcgktlla kavateaqvp flamagsefv
      361 evigglgaar vrslfreaqa rapcivyide idavgkkrst nvsgfanaee eqtlnqllve
      421 mdgmgttdhv ivlastnrad vldnalmrpg rldrhifidl ptlqerkeif eqhlkglkli
      481 qdgsfysqhl aeltpgfsga dianicneaa lhaareghks idtsnfeyav erviagtakr
      541 skilspeerk vvafhesgha lvgwllehte avmkvsiapr tnaalgfaqi lpreqylftk
      601 eqllermcma lggrvaeait fnkvttgaqd dlkkvtkiay amvkqygmvp sigqisfpdp
      661 esapgigrrp fsqgllqmmd heakilvaqa yrrtekllle nrdklqtlss allekeviny
      721 ddiealigpp phgpkkmiap qswlqaerdk qdtreeetpp qppsheeeee prlrpv
//
LOCUS       XP_041339486              79 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L13 [Pyrgilauda ruficollis].
ACCESSION   XP_041339486
VERSION     XP_041339486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..79
                     /product="60S ribosomal protein L13"
                     /calculated_mol_wt=8817
     Region          <2..55
                     /region_name="Ribosomal_L13e"
                     /note="Ribosomal protein L13e; cl01799"
                     /db_xref="CDD:470351"
     CDS             1..79
                     /gene="RPL13"
                     /coded_by="XM_041483552.1:390..629"
                     /db_xref="GeneID:121362216"
ORIGIN      
        1 mpkkgdsspe elkmatqltg pvmpiknvfk rekarvised eknfkafasl rmaranarlf
       61 girakrakea aeqdvekkk
//
LOCUS       XP_041339496            3663 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger homeobox protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339496
VERSION     XP_041339496.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483562.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3663
                     /product="zinc finger homeobox protein 3"
                     /calculated_mol_wt=400088
     Region          665..685
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..737
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1368..1388
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1406..1426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(1413..1415,1417..1418,1422,1425,1439,1442..1446,
                     1448..1449)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          1434..1455
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          1550..1574
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1601..1619
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          2144..2200
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(2145..2149,2151,2168,2174,2187,2189..2190,
                     2193..2194,2196..2198,2200..2201)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(2147,2150,2190,2193..2194,2197)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          2242..2298
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2591..2736
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          2640..2696
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2945..3001
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..3663
                     /gene="ZFHX3"
                     /coded_by="XM_041483562.1:302..11293"
                     /db_xref="GeneID:121362227"
ORIGIN      
        1 megcdspvip gkdngcgipq hqqwtdlnsa hlpdpagsme qpaaescspl dslrvpfper
       61 gpessaagag tepagkevsc gqcaasfagl qsymehrcag arpppplrge sgsdssedge
      121 eesdvenlag eivyqpdgsa yiveslsqlv qsggaggsgt lpsllpnslp kqgepsaaap
      181 vypqiintfh iassfgkwfd gsdqafpnts alagispvlh sfrvfdvrhk snkdylnsdg
      241 saksscvskd vpnnvdlskf dgfvlygkrk pilmcflckl sfgyvrsfvt havhdhrmtl
      301 seeerkilsn knisaiiqgi gkdkeplvsf lepknktfqh plvsaanlig pghsfygkfs
      361 gicmegeqal qagaaggaep ppaagvlaps allnlgglts salktpitsv plgplasspt
      421 kssegkdpgv aggekqegdd qdslsekvep aeeveeeeee dveeeeeeee eeeeeededd
      481 egckglfpnd ledeledrpq edvgavagsg sskkdlalsn qsisnsplmp nvlqtlsrgt
      541 astssnsass fvfdganrrn hlsfnneggg asvaegsrrl dfidesankd natapepnes
      601 aegedgsyis hhqhagplce lgggecpsgs gvecpkcdtv lgssrslggh mtmmhsrnsc
      661 ktlkcpkcnw hykyqqtlea hmkekhpepg gscvycksgq phprlarges ytcgykpfrc
      721 evcnystttk gnlsihmqsd khlnnmqnlq ngggeqvfsh tagaaaaaaa aaaaaaanig
      781 stcgapsptk pktkptwrce vcdyetnvar nlrihmtsek hmhnmmllqq nmsqiqhnrh
      841 lglgslpspa eaelyqyyla qnmnlpnlkm dstssdaqfm mggfqldptn pmatmapslv
      901 ggeipldmrl gggqlvseel mnlgesftqt ndpslklfqc avcnkfttdn ldmlglhmnv
      961 erslpedewk avmgdsyqck lcryntqlka nfqlhcktdk hvqkyqlvah ikeggkanew
     1021 rlkcvaignp vhlkcnacdy ytnsleklrl htvnsrheas lklykhlqhh esgvegescy
     1081 yhcvlcnyst kaklnliqhv rsmkhqrses lrklqrlqkg lpeeeedlgq iftirkcpaa
     1141 eaeepsedve gpnetagdae epakeqesgg dkdqskwtap asqpekelpe ppasskrisf
     1201 psssesplsf kwsktseetk seqmyqcpyc kysnadvnrl rvhamtqhsv qpmlrcplcq
     1261 dmlnnkihlq lhlthlhsvs pdcveklimt vttpevmmps smflpaaape kdgnsgaeer
     1321 egkqsetsed vgktllssds aehsgdpkpt padpsaared sgflcwkkgc sqvfkssaal
     1381 qthfndvhak rpqlpvsdrh vykyrcnqcs lafktieklq lhsqyhvira atmcclcqrs
     1441 frtfqalkkh letshlelse adiqqlyggl lvngdllamg dpslaedhti iveedkeees
     1501 dledkqsptg sdsgsvqeds gsepkralpf rkgpnftmek fldpsrpykc tvckesftqk
     1561 nillvhynsv shlhklkral qesatgqpep tsspdnkpfk cntcnvaysq sstleihmrs
     1621 vlhqtkaraa kleaaggssn gagnssssss lslgsstpsp vsatnsnafa ttststsgtt
     1681 pipsllnqvs sdsvgipplg navstnissp aepkevnrkk ladmiasrqq qqqqqqqqqq
     1741 qqqaqtlaqa qvqahlqqel qqqaallqsq lfnpallphf pmttetllql qqqqhllfpf
     1801 yipsaefqln pevslpvtsg altltgtgps lledlkaqvq lpqqshpqll qqqqgqlsls
     1861 qphsvllqqs qhpekknksv vkekdketpr eresaergds nitlkeslpd nlkpkekkdf
     1921 vpgsssepsi lppriasdar gnatkallen fgfelviqyn enkqkgqkkn gkteqgenle
     1981 klecdtcgkf fsnililksh qehvhqhyfp fkqlerfakq yrehydklyp lrpqtpeppp
     2041 pppppppplp pappqpaaap aiptsappit sptiapaqps vpltqlsmpm elpifsplmm
     2101 qtmplqtlpa qlppqlgpvd plpadlaqly qhqlnpsllq qqqnkrprtr itddqlrvlr
     2161 qyfdinnsps eeqikemadk sglpqkvikh wfrntlfker qrnkdspynf snppitslee
     2221 lkidsrppsp epqkqeywgs krssrtrftd yqlrvlqdff danaypkdde feqlsnllnl
     2281 ptrvivvwfq narqkarkny enqgegkdge rreltndryi rtsnlnyqck kcslvfqrif
     2341 dlikhqkklc ykdededgqd dsqnedsmda ielltptsss cstpmpsqay stptssanat
     2401 ssallqltae addsstfssk aeatdekpkq seppstqqnq tqekqvqpkq epqqqqdqge
     2461 qktssahqki sqlsspsslq qppppqppqc slsqsspsps qlshlslkpi htstpqqlan
     2521 lppqlipyqc dqcklafpsf ehwqehqqlh flsaqnqfih ppfldrtldm pfmlfdpsnp
     2581 llasqllsgt lpqipassat spstptstmn tlkrkleeka saspgendsg tggeepqrdk
     2641 rlrttitpeq leilyqkyll dsnptrkmld hiahevglkk rvvqvwfqnt rarerkgqfr
     2701 avgpaqahrr cpfcralfka ktaleahirs rhwheakrag ynltlsamll dcdgglqmkg
     2761 difdgasfsh mpptssdgqs vplspvnksm elsprtllsp ssikvegved fespsmssvn
     2821 lnfdqtkldn ddcssvntai tdtttgdegn adndsatgia tetkstsgps egltkaamia
     2881 mseyedrlss glvspapsfy skeydnegtv dysetsslad pcspspgasg sasksgesgd
     2941 rpgqkrfrtq mtnlqlkvlk scfndyrtpt mlecevlgnd iglpkrvvqv wfqnarakek
     3001 ksklsmakhf ginqtsyegp ktectlcgik ysarlsvrdh ifsqqhiskv ketigsqldk
     3061 ekeyfdpatv rqlmaqqeld rikkanevlg laaqqqgmfd ntplqalnlp aaypalqgip
     3121 pvllpglnsp slpgftpsnt altspkpslm glpstsvpsp glptsglpnk qppaalsspt
     3181 paqataavap qqppattpqp qqpppaqrke kenekakeke kapkgkgdtl pgpkkekgea
     3241 pagtlaaplp tmeyavepaq lqalqaalns dpttlltsqf lpyfvpgfsp yyapqipgal
     3301 qsgylqpmyg meglfpyspa lsqallglsp gsllqqyqqy qqslqealqq qqrqqqqqqq
     3361 qqqqqqkpqq pkgsqtpvpt gaatpdkdpa keppkqeeqk naprevspll pkpqeepeae
     3421 gkgadslcdp fivpkvqykl vcrkcqacfg dqeaasdhlk slcffgqsva nlhemvlhvp
     3481 tgsgqgsgsy qcvacestvc gdealsqhle saphkhrtit raarnakehp sllphsacpp
     3541 dpstastsqs aahsndsppp prpppaspha srkpwppaap raptgqpppp pfpplsssst
     3601 vtssscstsg vqpsmptddy seesdtdlsq ksdgpaspae gpqdpgcpkd sglasigmdt
     3661 frl
//
LOCUS       XP_041339502            3663 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger homeobox protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339502
VERSION     XP_041339502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3663
                     /product="zinc finger homeobox protein 3"
                     /calculated_mol_wt=400088
     Region          665..685
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          720..737
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1368..1388
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1406..1426
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(1413..1415,1417..1418,1422,1425,1439,1442..1446,
                     1448..1449)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          1434..1455
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          1550..1574
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1601..1619
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          2144..2200
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(2145..2149,2151,2168,2174,2187,2189..2190,
                     2193..2194,2196..2198,2200..2201)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(2147,2150,2190,2193..2194,2197)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          2242..2298
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2591..2736
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          2640..2696
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          2945..3001
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..3663
                     /gene="ZFHX3"
                     /coded_by="XM_041483568.1:102..11093"
                     /db_xref="GeneID:121362227"
ORIGIN      
        1 megcdspvip gkdngcgipq hqqwtdlnsa hlpdpagsme qpaaescspl dslrvpfper
       61 gpessaagag tepagkevsc gqcaasfagl qsymehrcag arpppplrge sgsdssedge
      121 eesdvenlag eivyqpdgsa yiveslsqlv qsggaggsgt lpsllpnslp kqgepsaaap
      181 vypqiintfh iassfgkwfd gsdqafpnts alagispvlh sfrvfdvrhk snkdylnsdg
      241 saksscvskd vpnnvdlskf dgfvlygkrk pilmcflckl sfgyvrsfvt havhdhrmtl
      301 seeerkilsn knisaiiqgi gkdkeplvsf lepknktfqh plvsaanlig pghsfygkfs
      361 gicmegeqal qagaaggaep ppaagvlaps allnlgglts salktpitsv plgplasspt
      421 kssegkdpgv aggekqegdd qdslsekvep aeeveeeeee dveeeeeeee eeeeeededd
      481 egckglfpnd ledeledrpq edvgavagsg sskkdlalsn qsisnsplmp nvlqtlsrgt
      541 astssnsass fvfdganrrn hlsfnneggg asvaegsrrl dfidesankd natapepnes
      601 aegedgsyis hhqhagplce lgggecpsgs gvecpkcdtv lgssrslggh mtmmhsrnsc
      661 ktlkcpkcnw hykyqqtlea hmkekhpepg gscvycksgq phprlarges ytcgykpfrc
      721 evcnystttk gnlsihmqsd khlnnmqnlq ngggeqvfsh tagaaaaaaa aaaaaaanig
      781 stcgapsptk pktkptwrce vcdyetnvar nlrihmtsek hmhnmmllqq nmsqiqhnrh
      841 lglgslpspa eaelyqyyla qnmnlpnlkm dstssdaqfm mggfqldptn pmatmapslv
      901 ggeipldmrl gggqlvseel mnlgesftqt ndpslklfqc avcnkfttdn ldmlglhmnv
      961 erslpedewk avmgdsyqck lcryntqlka nfqlhcktdk hvqkyqlvah ikeggkanew
     1021 rlkcvaignp vhlkcnacdy ytnsleklrl htvnsrheas lklykhlqhh esgvegescy
     1081 yhcvlcnyst kaklnliqhv rsmkhqrses lrklqrlqkg lpeeeedlgq iftirkcpaa
     1141 eaeepsedve gpnetagdae epakeqesgg dkdqskwtap asqpekelpe ppasskrisf
     1201 psssesplsf kwsktseetk seqmyqcpyc kysnadvnrl rvhamtqhsv qpmlrcplcq
     1261 dmlnnkihlq lhlthlhsvs pdcveklimt vttpevmmps smflpaaape kdgnsgaeer
     1321 egkqsetsed vgktllssds aehsgdpkpt padpsaared sgflcwkkgc sqvfkssaal
     1381 qthfndvhak rpqlpvsdrh vykyrcnqcs lafktieklq lhsqyhvira atmcclcqrs
     1441 frtfqalkkh letshlelse adiqqlyggl lvngdllamg dpslaedhti iveedkeees
     1501 dledkqsptg sdsgsvqeds gsepkralpf rkgpnftmek fldpsrpykc tvckesftqk
     1561 nillvhynsv shlhklkral qesatgqpep tsspdnkpfk cntcnvaysq sstleihmrs
     1621 vlhqtkaraa kleaaggssn gagnssssss lslgsstpsp vsatnsnafa ttststsgtt
     1681 pipsllnqvs sdsvgipplg navstnissp aepkevnrkk ladmiasrqq qqqqqqqqqq
     1741 qqqaqtlaqa qvqahlqqel qqqaallqsq lfnpallphf pmttetllql qqqqhllfpf
     1801 yipsaefqln pevslpvtsg altltgtgps lledlkaqvq lpqqshpqll qqqqgqlsls
     1861 qphsvllqqs qhpekknksv vkekdketpr eresaergds nitlkeslpd nlkpkekkdf
     1921 vpgsssepsi lppriasdar gnatkallen fgfelviqyn enkqkgqkkn gkteqgenle
     1981 klecdtcgkf fsnililksh qehvhqhyfp fkqlerfakq yrehydklyp lrpqtpeppp
     2041 pppppppplp pappqpaaap aiptsappit sptiapaqps vpltqlsmpm elpifsplmm
     2101 qtmplqtlpa qlppqlgpvd plpadlaqly qhqlnpsllq qqqnkrprtr itddqlrvlr
     2161 qyfdinnsps eeqikemadk sglpqkvikh wfrntlfker qrnkdspynf snppitslee
     2221 lkidsrppsp epqkqeywgs krssrtrftd yqlrvlqdff danaypkdde feqlsnllnl
     2281 ptrvivvwfq narqkarkny enqgegkdge rreltndryi rtsnlnyqck kcslvfqrif
     2341 dlikhqkklc ykdededgqd dsqnedsmda ielltptsss cstpmpsqay stptssanat
     2401 ssallqltae addsstfssk aeatdekpkq seppstqqnq tqekqvqpkq epqqqqdqge
     2461 qktssahqki sqlsspsslq qppppqppqc slsqsspsps qlshlslkpi htstpqqlan
     2521 lppqlipyqc dqcklafpsf ehwqehqqlh flsaqnqfih ppfldrtldm pfmlfdpsnp
     2581 llasqllsgt lpqipassat spstptstmn tlkrkleeka saspgendsg tggeepqrdk
     2641 rlrttitpeq leilyqkyll dsnptrkmld hiahevglkk rvvqvwfqnt rarerkgqfr
     2701 avgpaqahrr cpfcralfka ktaleahirs rhwheakrag ynltlsamll dcdgglqmkg
     2761 difdgasfsh mpptssdgqs vplspvnksm elsprtllsp ssikvegved fespsmssvn
     2821 lnfdqtkldn ddcssvntai tdtttgdegn adndsatgia tetkstsgps egltkaamia
     2881 mseyedrlss glvspapsfy skeydnegtv dysetsslad pcspspgasg sasksgesgd
     2941 rpgqkrfrtq mtnlqlkvlk scfndyrtpt mlecevlgnd iglpkrvvqv wfqnarakek
     3001 ksklsmakhf ginqtsyegp ktectlcgik ysarlsvrdh ifsqqhiskv ketigsqldk
     3061 ekeyfdpatv rqlmaqqeld rikkanevlg laaqqqgmfd ntplqalnlp aaypalqgip
     3121 pvllpglnsp slpgftpsnt altspkpslm glpstsvpsp glptsglpnk qppaalsspt
     3181 paqataavap qqppattpqp qqpppaqrke kenekakeke kapkgkgdtl pgpkkekgea
     3241 pagtlaaplp tmeyavepaq lqalqaalns dpttlltsqf lpyfvpgfsp yyapqipgal
     3301 qsgylqpmyg meglfpyspa lsqallglsp gsllqqyqqy qqslqealqq qqrqqqqqqq
     3361 qqqqqqkpqq pkgsqtpvpt gaatpdkdpa keppkqeeqk naprevspll pkpqeepeae
     3421 gkgadslcdp fivpkvqykl vcrkcqacfg dqeaasdhlk slcffgqsva nlhemvlhvp
     3481 tgsgqgsgsy qcvacestvc gdealsqhle saphkhrtit raarnakehp sllphsacpp
     3541 dpstastsqs aahsndsppp prpppaspha srkpwppaap raptgqpppp pfpplsssst
     3601 vtssscstsg vqpsmptddy seesdtdlsq ksdgpaspae gpqdpgcpkd sglasigmdt
     3661 frl
//
LOCUS       XP_041339517             594 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339517
VERSION     XP_041339517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483583.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="protein CBFA2T3 isoform X1"
                     /calculated_mol_wt=65252
     Region          111..200
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          328..394
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          433..>487
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          505..541
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..594
                     /gene="CBFA2T3"
                     /coded_by="XM_041483583.1:180..1964"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mpdspadvkt qarstppgmp pppaaqgasr hpsftpstnr dagpptflpr grfhgclkws
       61 mvcllmngss hsptaingap stpngfsngp atsssaslst hqlppacgar qlsklkrflt
      121 tlqqfgndis peigervrtl vlglvnstlt ieefhaklqe atnfplrpfv ipflkanlpl
      181 lqrellhcar makqtpaqyl aqheqlllda nasspidsse lllevgesgk rrtpdrtken
      241 gldrdplhpe hlskrpctms paqryspsng lshppnglgh ppagpplpqh yrledmamah
      301 hyrdsyrhpd prelrerqrp aavhgtrqee vidhrltdre waeewkhlnn llncimdmve
      361 ktrrsltvlr rcqeadreel nhwirrysda edmkkgspps arphnsssaa aeapqldahr
      421 dfaprplsgy mpeeiwrkae eavnevkrqa mselqkavsd aerkahelit terakmeral
      481 aeakrqased altvinqqed ssescwncgr kasetcsgcn tarycgsfcq hkdwekhhhv
      541 cgqtlqglpg paapgpgqpd gvpamassps eagsvaasra gtpatpapld sasr
//
LOCUS       XP_041339527             594 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339527
VERSION     XP_041339527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483593.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="protein CBFA2T3 isoform X1"
                     /calculated_mol_wt=65252
     Region          111..200
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          328..394
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          433..>487
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          505..541
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..594
                     /gene="CBFA2T3"
                     /coded_by="XM_041483593.1:112..1896"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mpdspadvkt qarstppgmp pppaaqgasr hpsftpstnr dagpptflpr grfhgclkws
       61 mvcllmngss hsptaingap stpngfsngp atsssaslst hqlppacgar qlsklkrflt
      121 tlqqfgndis peigervrtl vlglvnstlt ieefhaklqe atnfplrpfv ipflkanlpl
      181 lqrellhcar makqtpaqyl aqheqlllda nasspidsse lllevgesgk rrtpdrtken
      241 gldrdplhpe hlskrpctms paqryspsng lshppnglgh ppagpplpqh yrledmamah
      301 hyrdsyrhpd prelrerqrp aavhgtrqee vidhrltdre waeewkhlnn llncimdmve
      361 ktrrsltvlr rcqeadreel nhwirrysda edmkkgspps arphnsssaa aeapqldahr
      421 dfaprplsgy mpeeiwrkae eavnevkrqa mselqkavsd aerkahelit terakmeral
      481 aeakrqased altvinqqed ssescwncgr kasetcsgcn tarycgsfcq hkdwekhhhv
      541 cgqtlqglpg paapgpgqpd gvpamassps eagsvaasra gtpatpapld sasr
//
LOCUS       XP_041339536             594 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339536
VERSION     XP_041339536.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483602.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="protein CBFA2T3 isoform X1"
                     /calculated_mol_wt=65252
     Region          111..200
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          328..394
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          433..>487
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          505..541
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..594
                     /gene="CBFA2T3"
                     /coded_by="XM_041483602.1:150..1934"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mpdspadvkt qarstppgmp pppaaqgasr hpsftpstnr dagpptflpr grfhgclkws
       61 mvcllmngss hsptaingap stpngfsngp atsssaslst hqlppacgar qlsklkrflt
      121 tlqqfgndis peigervrtl vlglvnstlt ieefhaklqe atnfplrpfv ipflkanlpl
      181 lqrellhcar makqtpaqyl aqheqlllda nasspidsse lllevgesgk rrtpdrtken
      241 gldrdplhpe hlskrpctms paqryspsng lshppnglgh ppagpplpqh yrledmamah
      301 hyrdsyrhpd prelrerqrp aavhgtrqee vidhrltdre waeewkhlnn llncimdmve
      361 ktrrsltvlr rcqeadreel nhwirrysda edmkkgspps arphnsssaa aeapqldahr
      421 dfaprplsgy mpeeiwrkae eavnevkrqa mselqkavsd aerkahelit terakmeral
      481 aeakrqased altvinqqed ssescwncgr kasetcsgcn tarycgsfcq hkdwekhhhv
      541 cgqtlqglpg paapgpgqpd gvpamassps eagsvaasra gtpatpapld sasr
//
LOCUS       XP_041339545             594 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339545
VERSION     XP_041339545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="protein CBFA2T3 isoform X1"
                     /calculated_mol_wt=65252
     Region          111..200
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          328..394
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          433..>487
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          505..541
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..594
                     /gene="CBFA2T3"
                     /coded_by="XM_041483611.1:162..1946"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mpdspadvkt qarstppgmp pppaaqgasr hpsftpstnr dagpptflpr grfhgclkws
       61 mvcllmngss hsptaingap stpngfsngp atsssaslst hqlppacgar qlsklkrflt
      121 tlqqfgndis peigervrtl vlglvnstlt ieefhaklqe atnfplrpfv ipflkanlpl
      181 lqrellhcar makqtpaqyl aqheqlllda nasspidsse lllevgesgk rrtpdrtken
      241 gldrdplhpe hlskrpctms paqryspsng lshppnglgh ppagpplpqh yrledmamah
      301 hyrdsyrhpd prelrerqrp aavhgtrqee vidhrltdre waeewkhlnn llncimdmve
      361 ktrrsltvlr rcqeadreel nhwirrysda edmkkgspps arphnsssaa aeapqldahr
      421 dfaprplsgy mpeeiwrkae eavnevkrqa mselqkavsd aerkahelit terakmeral
      481 aeakrqased altvinqqed ssescwncgr kasetcsgcn tarycgsfcq hkdwekhhhv
      541 cgqtlqglpg paapgpgqpd gvpamassps eagsvaasra gtpatpapld sasr
//
LOCUS       XP_041339553             593 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339553
VERSION     XP_041339553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..593
                     /product="protein CBFA2T3 isoform X2"
                     /calculated_mol_wt=65122
     Region          111..200
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          328..394
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          433..>486
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          504..540
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..593
                     /gene="CBFA2T3"
                     /coded_by="XM_041483619.1:180..1961"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mpdspadvkt qarstppgmp pppaaqgasr hpsftpstnr dagpptflpr grfhgclkws
       61 mvcllmngss hsptaingap stpngfsngp atsssaslst hqlppacgar qlsklkrflt
      121 tlqqfgndis peigervrtl vlglvnstlt ieefhaklqe atnfplrpfv ipflkanlpl
      181 lqrellhcar makqtpaqyl aqheqlllda nasspidsse lllevgesgk rrtpdrtken
      241 gldrdplhpe hlskrpctms paqryspsng lshppnglgh ppagpplpqh yrledmamah
      301 hyrdsyrhpd prelrerqrp aavhgtrqee vidhrltdre waeewkhlnn llncimdmve
      361 ktrrsltvlr rcqeadreel nhwirrysda edmkkgspps arphnsssaa aeapqldahr
      421 dfaprplsgy mpeeiwrkae avnevkrqam selqkavsda erkahelitt erakmerala
      481 eakrqaseda ltvinqqeds sescwncgrk asetcsgcnt arycgsfcqh kdwekhhhvc
      541 gqtlqglpgp aapgpgqpdg vpamasspse agsvaasrag tpatpaplds asr
//
LOCUS       XP_041339555             568 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339555
VERSION     XP_041339555.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483621.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="protein CBFA2T3 isoform X3"
                     /calculated_mol_wt=62328
     Region          85..174
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          302..368
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          407..>461
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          479..515
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..568
                     /gene="CBFA2T3"
                     /coded_by="XM_041483621.1:179..1885"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mpdspadvkt qarstppgmp pppaaqgasr hpsftpstmm ngsshsptai ngapstpngf
       61 sngpatsssa slsthqlppa cgarqlsklk rflttlqqfg ndispeiger vrtlvlglvn
      121 stltieefha klqeatnfpl rpfvipflka nlpllqrell hcarmakqtp aqylaqheql
      181 lldanasspi dsselllevg esgkrrtpdr tkengldrdp lhpehlskrp ctmspaqrys
      241 psnglshppn glghppagpp lpqhyrledm amahhyrdsy rhpdprelre rqrpaavhgt
      301 rqeevidhrl tdrewaeewk hlnnllncim dmvektrrsl tvlrrcqead reelnhwirr
      361 ysdaedmkkg sppsarphns ssaaaeapql dahrdfaprp lsgympeeiw rkaeeavnev
      421 krqamselqk avsdaerkah elitterakm eralaeakrq asedaltvin qqedssescw
      481 ncgrkasetc sgcntarycg sfcqhkdwek hhhvcgqtlq glpgpaapgp gqpdgvpama
      541 sspseagsva asragtpatp apldsasr
//
LOCUS       XP_041339560             529 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041339560
VERSION     XP_041339560.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483626.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="protein CBFA2T3 isoform X4"
                     /calculated_mol_wt=58344
     Region          46..135
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          263..329
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          368..>422
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          440..476
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..529
                     /gene="CBFA2T3"
                     /coded_by="XM_041483626.1:132..1721"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mngsshspta ingapstpng fsngpatsss aslsthqlpp acgarqlskl krflttlqqf
       61 gndispeige rvrtlvlglv nstltieefh aklqeatnfp lrpfvipflk anlpllqrel
      121 lhcarmakqt paqylaqheq llldanassp idsselllev gesgkrrtpd rtkengldrd
      181 plhpehlskr pctmspaqry spsnglshpp nglghppagp plpqhyrled mamahhyrds
      241 yrhpdprelr erqrpaavhg trqeevidhr ltdrewaeew khlnnllnci mdmvektrrs
      301 ltvlrrcqea dreelnhwir rysdaedmkk gsppsarphn sssaaaeapq ldahrdfapr
      361 plsgympeei wrkaeeavne vkrqamselq kavsdaerka helitterak meralaeakr
      421 qasedaltvi nqqedssesc wncgrkaset csgcntaryc gsfcqhkdwe khhhvcgqtl
      481 qglpgpaapg pgqpdgvpam asspseagsv aasragtpat papldsasr
//
LOCUS       XP_041339570             529 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041339570
VERSION     XP_041339570.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483636.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="protein CBFA2T3 isoform X4"
                     /calculated_mol_wt=58344
     Region          46..135
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          263..329
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          368..>422
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          440..476
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..529
                     /gene="CBFA2T3"
                     /coded_by="XM_041483636.1:70..1659"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mngsshspta ingapstpng fsngpatsss aslsthqlpp acgarqlskl krflttlqqf
       61 gndispeige rvrtlvlglv nstltieefh aklqeatnfp lrpfvipflk anlpllqrel
      121 lhcarmakqt paqylaqheq llldanassp idsselllev gesgkrrtpd rtkengldrd
      181 plhpehlskr pctmspaqry spsnglshpp nglghppagp plpqhyrled mamahhyrds
      241 yrhpdprelr erqrpaavhg trqeevidhr ltdrewaeew khlnnllnci mdmvektrrs
      301 ltvlrrcqea dreelnhwir rysdaedmkk gsppsarphn sssaaaeapq ldahrdfapr
      361 plsgympeei wrkaeeavne vkrqamselq kavsdaerka helitterak meralaeakr
      421 qasedaltvi nqqedssesc wncgrkaset csgcntaryc gsfcqhkdwe khhhvcgqtl
      481 qglpgpaapg pgqpdgvpam asspseagsv aasragtpat papldsasr
//
LOCUS       XP_041339578             529 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CBFA2T3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041339578
VERSION     XP_041339578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483644.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="protein CBFA2T3 isoform X4"
                     /calculated_mol_wt=58344
     Region          46..135
                     /region_name="TAFH"
                     /note="NHR1 homology to TAF; pfam07531"
                     /db_xref="CDD:462195"
     Region          263..329
                     /region_name="NHR2"
                     /note="NHR2 domain like; pfam08788"
                     /db_xref="CDD:430219"
     Region          368..>422
                     /region_name="NtpE"
                     /note="Archaeal/vacuolar-type H+-ATPase subunit E/Vma4
                     [Energy production and conversion]; COG1390"
                     /db_xref="CDD:441000"
     Region          440..476
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..529
                     /gene="CBFA2T3"
                     /coded_by="XM_041483644.1:119..1708"
                     /db_xref="GeneID:121362241"
ORIGIN      
        1 mngsshspta ingapstpng fsngpatsss aslsthqlpp acgarqlskl krflttlqqf
       61 gndispeige rvrtlvlglv nstltieefh aklqeatnfp lrpfvipflk anlpllqrel
      121 lhcarmakqt paqylaqheq llldanassp idsselllev gesgkrrtpd rtkengldrd
      181 plhpehlskr pctmspaqry spsnglshpp nglghppagp plpqhyrled mamahhyrds
      241 yrhpdprelr erqrpaavhg trqeevidhr ltdrewaeew khlnnllnci mdmvektrrs
      301 ltvlrrcqea dreelnhwir rysdaedmkk gsppsarphn sssaaaeapq ldahrdfapr
      361 plsgympeei wrkaeeavne vkrqamselq kavsdaerka helitterak meralaeakr
      421 qasedaltvi nqqedssesc wncgrkaset csgcntaryc gsfcqhkdwe khhhvcgqtl
      481 qglpgpaapg pgqpdgvpam asspseagsv aasragtpat papldsasr
//
LOCUS       XP_041339592             608 aa            linear   VRT 06-MAY-2021
DEFINITION  VPS9 domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339592
VERSION     XP_041339592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="VPS9 domain-containing protein 1"
                     /calculated_mol_wt=65952
     Region          498..608
                     /region_name="VPS9"
                     /note="Vacuolar sorting protein 9 (VPS9) domain;
                     pfam02204"
                     /db_xref="CDD:460489"
     CDS             1..608
                     /gene="VPS9D1"
                     /coded_by="XM_041483658.1:47..1873"
                     /db_xref="GeneID:121362281"
ORIGIN      
        1 mraasgalgm dsagrtreay aeylrsiali aqalqeeaaa tensegvtpd tpkllklaeq
       61 clervksiaa algkaqvkaa aqergggpap lprhrrvcsd eggklspflp peifqklqia
      121 eaqsarkelt pleeaslqnq klkaayearv arlnpnqavq ktsltlslqr qmmenlviak
      181 areetlqrkm eerrlrlqea anrrfsssva ltpeeqeqra lyaaileyeq dndwprqwka
      241 qlkrspadls vvsglfscll scpehpitql lrrlqcavya rlypavsrgp adaspaspsa
      301 lsflsldagg sslpaepggr rlrasrslhc mfsvpehgpa lrhsqsstpl adsgapgpae
      361 ppeppressf edlerflasp egwapaeppa scgqdtalpe llkgvvrdih naidrllalt
      421 llafeglgta agkdqclacl eeaffpplwa pllalyrtvq qpreaalars merhrhaspa
      481 dmglasrlfp pgpgrpayas avqdlrlipl etcprrklec ivralrgice caeeycgtrd
      541 arslataaig addllpilsy vvlqtglpql lsecaaleef ihegyligee gycltslqsa
      601 lsyveslq
//
LOCUS       XP_041339603             405 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 10 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339603
VERSION     XP_041339603.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483669.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="cyclin-dependent kinase 10 isoform X1"
                     /calculated_mol_wt=45165
     Region          49..384
                     /region_name="STKc_CDK10"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 10; cd07845"
                     /db_xref="CDD:173742"
     Site            order(63..66,71,84,86,103,117,135..138,141,143..144,181,
                     183,185..186,188,199,202,214,216..219,221,259..260)
                     /site_type="active"
                     /db_xref="CDD:173742"
     Site            order(63..66,71,84,86,117,135..138,141,144,185..186,188,
                     199)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173742"
     Site            order(95..97,99,102..103,105..106,109..110,122,124,131,
                     170,173..176,204,206..209,213..214,354,358..360)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:173742"
     Site            order(103,143,181,183,202,214,216..219,221,259..260)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173742"
     Site            order(198..209,211..221)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173742"
     CDS             1..405
                     /gene="CDK10"
                     /coded_by="XM_041483669.1:30..1247"
                     /db_xref="GeneID:121362289"
ORIGIN      
        1 maapeagagp aapapasata paepeleplr lrrlcgdgff evpaadrlgr crsvkefekl
       61 nrigegtygi vyrardtvtn etvalkkvrm dnekdgmpis slreitlllq lqhpnivelk
      121 dvvvgnhles iflvmgyceq dlasllenmq tpfseaqvkc iilqvlkglq ylhenyiihr
      181 dlkvsnllmt dkgcvkiadf glartygmpp kpmtpkvvtl wyrapelllg mttqttsidm
      241 waagcilael lahkpllpgt seihqidliv qllgtpneni wpvrapcpfs hcpfslaapr
      301 plltlgfpqg fsklplatqy tlrkqpynnl khrfpwlsea glrllnflfm ydpkkratak
      361 dclessyfke kplpcepelm ptfphhrnkr aastamesqa krskp
//
LOCUS       XP_041339613             378 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 10 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339613
VERSION     XP_041339613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="cyclin-dependent kinase 10 isoform X2"
                     /calculated_mol_wt=42259
     Region          49..357
                     /region_name="STKc_CDK10"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 10; cd07845"
                     /db_xref="CDD:173742"
     Site            order(63..66,71,84,86,103,117,135..138,141,143..144,181,
                     183,185..186,188,199,202,214,216..219,221,259..260)
                     /site_type="active"
                     /db_xref="CDD:173742"
     Site            order(63..66,71,84,86,117,135..138,141,144,185..186,188,
                     199)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173742"
     Site            order(95..97,99,102..103,105..106,109..110,122,124,131,
                     170,173..176,204,206..209,213..214,327,331..333)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:173742"
     Site            order(103,143,181,183,202,214,216..219,221,259..260)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173742"
     Site            order(198..209,211..221)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173742"
     CDS             1..378
                     /gene="CDK10"
                     /coded_by="XM_041483679.1:30..1166"
                     /db_xref="GeneID:121362289"
ORIGIN      
        1 maapeagagp aapapasata paepeleplr lrrlcgdgff evpaadrlgr crsvkefekl
       61 nrigegtygi vyrardtvtn etvalkkvrm dnekdgmpis slreitlllq lqhpnivelk
      121 dvvvgnhles iflvmgyceq dlasllenmq tpfseaqvkc iilqvlkglq ylhenyiihr
      181 dlkvsnllmt dkgcvkiadf glartygmpp kpmtpkvvtl wyrapelllg mttqttsidm
      241 waagcilael lahkpllpgt seihqidliv qllgtpneni wpgfsklpla tqytlrkqpy
      301 nnlkhrfpwl seaglrllnf lfmydpkkra takdclessy fkekplpcep elmptfphhr
      361 nkraastame sqakrskp
//
LOCUS       XP_041339624             196 aa            linear   VRT 06-MAY-2021
DEFINITION  charged multivesicular body protein 1a [Pyrgilauda ruficollis].
ACCESSION   XP_041339624
VERSION     XP_041339624.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483690.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..196
                     /product="charged multivesicular body protein 1a"
                     /calculated_mol_wt=21606
     Region          7..172
                     /region_name="Snf7"
                     /note="pfam03357"
                     /db_xref="CDD:460896"
     CDS             1..196
                     /gene="CHMP1A"
                     /coded_by="XM_041483690.1:107..697"
                     /db_xref="GeneID:121362301"
ORIGIN      
        1 mddtlfqlkf takqlerlsk kaekdskaeq akvkkalqqk nvecarvyae nairkrnegl
       61 hwlrmasrld avaakvqtav tmkgvtknma qvtkaldkal ssmdlqkvsa vmdkfeqqvq
      121 nldvhtsvme dsmssattls tpqeqvdsli vqiaeengle imdqlsqlpe gaaavgessv
      181 rsqedqlsrr laalrn
//
LOCUS       XP_041339637            1229 aa            linear   VRT 06-MAY-2021
DEFINITION  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339637
VERSION     XP_041339637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1229
                     /product="pre-mRNA-splicing factor ATP-dependent RNA
                     helicase PRP16 isoform X1"
                     /calculated_mol_wt=140525
     Region          <312..557
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          534..>1148
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..1229
                     /gene="DHX38"
                     /coded_by="XM_041483703.1:216..3905"
                     /db_xref="GeneID:121362309"
ORIGIN      
        1 measeeslhr lsgtaasgea gglllrtrga eqhvfkapap rvsllgldvl aaqkrrerqe
       61 eaaggkrsrv asykdweegh deagsaeeee edeanrssrr arrnrhyrsv hvetpsytgg
      121 vseeflersr qrererrehg vfasskeekd rkkernrdrd hdrkrdreer drshhsrser
      181 dgssersgrr gepesprhrp kdaatpsrss weeddggyss ahrsqwesps ptpsyrdser
      241 shrlsslrdt drrerdrsvr srysdktplp tpsykynewa ddrrhlgatp rlsrgrgrrt
      301 egeegiafet eeerqqwedd qrqadrdwym mdegydefhn playsseeyv kkreqhlhkq
      361 rqkrisaqrr qinednerwe tnrmltsgvv hrievdedfe ednsakvhll vhnlvppfld
      421 grivftkqpe pvipvkdats dlaiiarkgs qlvrkhreqk erkraqhkhw elagtklgdi
      481 mgikkeeekd emvtedgkvd ykteqkfaeh mkekseasse fakkksileq rqylpifavq
      541 qellsilrdn sivivvgetg sgkttqltqy lhedgytdyg migctqprrv aamsvakrvs
      601 eemgvrlgee vgyairfedc tsestvikym tdgillresl readldnysa iimdeahers
      661 lntdvlfgll revvarrsdl klvvtsatmd adkfasffgn vpifhipgrt fpvdilfskt
      721 pqedyveaav kqalqvhlsg apgdilvfmp gqedievtse qivehleele kapalavlpi
      781 ysqlpsdlqa kifqkapdgv rkcivatnia etsltvdgim fvidsgyckl kvfnprigmd
      841 alqiypisqa nanqragrag rtgpghcfrl ytqsayknel ltttvpeiqr tnlanvvlll
      901 kslgvqdllq fhfmdppped nmlnsmyqlw ilgaldntgg ltstgrlmve fpldpalskm
      961 livscdmgcs seillvvsml svpaifyrpk greeesdqvr ekfavpesdh ltylnvylqw
     1021 knnsystlwc nqhfihakam rkvrevraql kdimvqqrms lascgtdwdv vrkcicaayf
     1081 hqaaklkgig eyvnirtgmp chlhptsslf gmgytpdyiv yhelvmttke ymqcvtavdg
     1141 ewlaelgpmf ysikhagksr qenrrrakee vsameeemal aeeqlrarre eqerrnplgs
     1201 arstkiytpg rkeqgealtp rrtparfgl
//
LOCUS       XP_041339645            1223 aa            linear   VRT 06-MAY-2021
DEFINITION  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339645
VERSION     XP_041339645.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483711.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1223
                     /product="pre-mRNA-splicing factor ATP-dependent RNA
                     helicase PRP16 isoform X2"
                     /calculated_mol_wt=139769
     Region          <312..557
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          534..>1148
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..1223
                     /gene="DHX38"
                     /coded_by="XM_041483711.1:216..3887"
                     /db_xref="GeneID:121362309"
ORIGIN      
        1 measeeslhr lsgtaasgea gglllrtrga eqhvfkapap rvsllgldvl aaqkrrerqe
       61 eaaggkrsrv asykdweegh deagsaeeee edeanrssrr arrnrhyrsv hvetpsytgg
      121 vseeflersr qrererrehg vfasskeekd rkkernrdrd hdrkrdreer drshhsrser
      181 dgssersgrr gepesprhrp kdaatpsrss weeddggyss ahrsqwesps ptpsyrdser
      241 shrlsslrdt drrerdrsvr srysdktplp tpsykynewa ddrrhlgatp rlsrgrgrrt
      301 egeegiafet eeerqqwedd qrqadrdwym mdegydefhn playsseeyv kkreqhlhkq
      361 rqkrisaqrr qinednerwe tnrmltsgvv hrievdedfe ednsakvhll vhnlvppfld
      421 grivftkqpe pvipvkdats dlaiiarkgs qlvrkhreqk erkraqhkhw elagtklgdi
      481 mgikkeeekd emvtedgkvd ykteqkfaeh mkekseasse fakkksileq rqylpifavq
      541 qellsilrdn sivivvgetg sgkttqltqy lhedgytdyg migctqprrv aamsvakrvs
      601 eemgvrlgee vgyairfedc tsestvikym tdgillresl readldnysa iimdeahers
      661 lntdvlfgll revvarrsdl klvvtsatmd adkfasffgn vpifhipgrt fpvdilfskt
      721 pqedyveaav kqalqvhlsg apgdilvfmp gqedievtse qivehleele kapalavlpi
      781 ysqlpsdlqa kifqkapdgv rkcivatnia etsltvdgim fvidsgyckl kvfnprigmd
      841 alqiypisqa nanqragrag rtgpghcfrl ytqsayknel ltttvpeiqr tnlanvvlll
      901 kslgvqdllq fhfmdppped nmlnsmyqlw ilgaldntgg ltstgrlmve fpldpalskm
      961 livscdmgcs seillvvsml svpaifyrpk greeesdqvr ekfavpesdh ltylnvylqw
     1021 knnsystlwc nqhfihakam rkvrevraql kdimvqqrms lascgtdwdv vrkcicaayf
     1081 hqaaklkgig eyvnirtgmp chlhptsslf gmgytpdyiv yhelvmttke ymqcvtavdg
     1141 ewlaelgpmf ysikhagksr qenrrrakee vsameeemal aeeqlrarre eqerrnplgs
     1201 arcvialpah glpvwripas lyv
//
LOCUS       XP_041339652            1222 aa            linear   VRT 06-MAY-2021
DEFINITION  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339652
VERSION     XP_041339652.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483718.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1222
                     /product="pre-mRNA-splicing factor ATP-dependent RNA
                     helicase PRP16 isoform X3"
                     /calculated_mol_wt=139654
     Region          <312..557
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          534..>1148
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     CDS             1..1222
                     /gene="DHX38"
                     /coded_by="XM_041483718.1:216..3884"
                     /db_xref="GeneID:121362309"
ORIGIN      
        1 measeeslhr lsgtaasgea gglllrtrga eqhvfkapap rvsllgldvl aaqkrrerqe
       61 eaaggkrsrv asykdweegh deagsaeeee edeanrssrr arrnrhyrsv hvetpsytgg
      121 vseeflersr qrererrehg vfasskeekd rkkernrdrd hdrkrdreer drshhsrser
      181 dgssersgrr gepesprhrp kdaatpsrss weeddggyss ahrsqwesps ptpsyrdser
      241 shrlsslrdt drrerdrsvr srysdktplp tpsykynewa ddrrhlgatp rlsrgrgrrt
      301 egeegiafet eeerqqwedd qrqadrdwym mdegydefhn playsseeyv kkreqhlhkq
      361 rqkrisaqrr qinednerwe tnrmltsgvv hrievdedfe ednsakvhll vhnlvppfld
      421 grivftkqpe pvipvkdats dlaiiarkgs qlvrkhreqk erkraqhkhw elagtklgdi
      481 mgikkeeekd emvtedgkvd ykteqkfaeh mkekseasse fakkksileq rqylpifavq
      541 qellsilrdn sivivvgetg sgkttqltqy lhedgytdyg migctqprrv aamsvakrvs
      601 eemgvrlgee vgyairfedc tsestvikym tdgillresl readldnysa iimdeahers
      661 lntdvlfgll revvarrsdl klvvtsatmd adkfasffgn vpifhipgrt fpvdilfskt
      721 pqedyveaav kqalqvhlsg apgdilvfmp gqedievtse qivehleele kapalavlpi
      781 ysqlpsdlqa kifqkapdgv rkcivatnia etsltvdgim fvidsgyckl kvfnprigmd
      841 alqiypisqa nanqragrag rtgpghcfrl ytqsayknel ltttvpeiqr tnlanvvlll
      901 kslgvqdllq fhfmdppped nmlnsmyqlw ilgaldntgg ltstgrlmve fpldpalskm
      961 livscdmgcs seillvvsml svpaifyrpk greeesdqvr ekfavpesdh ltylnvylqw
     1021 knnsystlwc nqhfihakam rkvrevraql kdimvqqrms lascgtdwdv vrkcicaayf
     1081 hqaaklkgig eyvnirtgmp chlhptsslf gmgytpdyiv yhelvmttke ymqcvtavdg
     1141 ewlaelgpmf ysikhagksr qenrrrakee vsameeemal aeeqlrarre eqerrnplgs
     1201 arcvialpah glpvwripas lf
//
LOCUS       XP_041339664             486 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339664
VERSION     XP_041339664.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483730.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="dihydroorotate dehydrogenase (quinone),
                     mitochondrial isoform X1"
                     /calculated_mol_wt=52086
     Region          170..464
                     /region_name="DHOD_2_like"
                     /note="Dihydroorotate dehydrogenase (DHOD) class 2. DHOD
                     catalyzes the oxidation of (S)-dihydroorotate to orotate.
                     This is the fourth step and the only redox reaction in the
                     de novo biosynthesis of UMP, the precursor of all
                     pyrimidine nucleotides. DHOD requires...; cd04738"
                     /db_xref="CDD:240089"
     Site            order(186,190,210,235,237..239,302,305,307,345,373..375,
                     396,425,446..447)
                     /site_type="active"
                     /db_xref="CDD:240089"
     Site            order(190,305,345)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:240089"
     Site            order(210,235,302,345,373..374,396,425,446..447)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:240089"
     Site            order(235,302,304,374..375)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:240089"
     CDS             1..486
                     /gene="DHODH"
                     /coded_by="XM_041483730.1:1..1461"
                     /db_xref="GeneID:121362325"
ORIGIN      
        1 mpqhllyptr vageasrecs vrvgdtaalp wlsvplpaav prsrpvrrca psikrgprls
       61 pppllrrywl qgyalrqsrg rggprkcprc waerdggaaa rtaagagagr lragpgigag
      121 grrraalrgg gdaraagaas rgrprpgftr rrpraaalrp srrpraapqe vrvlgqrfrn
      181 plglaagfdk qceavdglyk mgfgfvevgt vtpkpqegnp kprvfrlaed eavinrygfn
      241 shghvaverr lrarqekqir ltgagmplgv nlgknksstd aaadyvagvr tlgpladylv
      301 vnvsspntpg lrdlqgkael rdllskvlve rdllpckrkp avlvkiapdl taqdkqdias
      361 vvcelgvdgl ivsnttvsrp sslrsrqrte pgglsgkplr elstqtirem yaltqgrvpi
      421 igvggvssgq dalekiraga slvqlytalv yhgppvvgav kreleellre qgfknvmeav
      481 gadhrc
//
LOCUS       XP_041339675             448 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339675
VERSION     XP_041339675.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483741.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="dihydroorotate dehydrogenase (quinone),
                     mitochondrial isoform X2"
                     /calculated_mol_wt=47929
     Region          170..426
                     /region_name="DHOD_2_like"
                     /note="Dihydroorotate dehydrogenase (DHOD) class 2. DHOD
                     catalyzes the oxidation of (S)-dihydroorotate to orotate.
                     This is the fourth step and the only redox reaction in the
                     de novo biosynthesis of UMP, the precursor of all
                     pyrimidine nucleotides. DHOD requires...; cd04738"
                     /db_xref="CDD:240089"
     Site            order(186,190,210,235,237..239,302,305,307,335..337,358,
                     387,408..409)
                     /site_type="active"
                     /db_xref="CDD:240089"
     Site            order(210,235,302,335..336,358,387,408..409)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:240089"
     Site            order(235,302,304,336..337)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:240089"
     CDS             1..448
                     /gene="DHODH"
                     /coded_by="XM_041483741.1:1..1347"
                     /db_xref="GeneID:121362325"
ORIGIN      
        1 mpqhllyptr vageasrecs vrvgdtaalp wlsvplpaav prsrpvrrca psikrgprls
       61 pppllrrywl qgyalrqsrg rggprkcprc waerdggaaa rtaagagagr lragpgigag
      121 grrraalrgg gdaraagaas rgrprpgftr rrpraaalrp srrpraapqe vrvlgqrfrn
      181 plglaagfdk qceavdglyk mgfgfvevgt vtpkpqegnp kprvfrlaed eavinrygfn
      241 shghvaverr lrarqekqir ltgagmplgv nlgknksstd aaadyvagvr tlgpladylv
      301 vnvsspntpg lrdlqgkael rdllsklgvd glivsnttvs rpsslrsrqr tepgglsgkp
      361 lrelstqtir emyaltqgrv piigvggvss gqdalekira gaslvqlyta lvyhgppvvg
      421 avkreleell reqgfknvme avgadhrc
//
LOCUS       XP_041339683             389 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339683
VERSION     XP_041339683.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483749.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="dihydroorotate dehydrogenase (quinone),
                     mitochondrial isoform X3"
                     /calculated_mol_wt=41096
     Region          38..367
                     /region_name="DHOD_2_like"
                     /note="Dihydroorotate dehydrogenase (DHOD) class 2. DHOD
                     catalyzes the oxidation of (S)-dihydroorotate to orotate.
                     This is the fourth step and the only redox reaction in the
                     de novo biosynthesis of UMP, the precursor of all
                     pyrimidine nucleotides. DHOD requires...; cd04738"
                     /db_xref="CDD:240089"
     Site            order(89,93,113,138,140..142,205,208,210,248,276..278,299,
                     328,349..350)
                     /site_type="active"
                     /db_xref="CDD:240089"
     Site            order(93,208,248)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:240089"
     Site            order(113,138,205,248,276..277,299,328,349..350)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:240089"
     Site            order(138,205,207,277..278)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:240089"
     CDS             1..389
                     /gene="DHODH"
                     /coded_by="XM_041483749.1:63..1232"
                     /db_xref="GeneID:121362325"
ORIGIN      
        1 maaplrgrll alalggcgla lgsalaagde rlyaaavmpa lralppeaah glalraaalg
       61 llpsarpdgp alevrvlgqr frnplglaag fdkqceavdg lykmgfgfve vgtvtpkpqe
      121 gnpkprvfrl aedeavinry gfnshghvav errlrarqek qirltgagmp lgvnlgknks
      181 stdaaadyva gvrtlgplad ylvvnvsspn tpglrdlqgk aelrdllskv lverdllpck
      241 rkpavlvkia pdltaqdkqd iasvvcelgv dglivsnttv srpsslrsrq rtepgglsgk
      301 plrelstqti remyaltqgr vpiigvggvs sgqdalekir agaslvqlyt alvyhgppvv
      361 gavkreleel lreqgfknvm eavgadhrc
//
LOCUS       XP_041339697             374 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339697
VERSION     XP_041339697.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483763.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="dihydroorotate dehydrogenase (quinone),
                     mitochondrial isoform X4"
                     /calculated_mol_wt=40064
     Region          170..>366
                     /region_name="DHOD_2_like"
                     /note="Dihydroorotate dehydrogenase (DHOD) class 2. DHOD
                     catalyzes the oxidation of (S)-dihydroorotate to orotate.
                     This is the fourth step and the only redox reaction in the
                     de novo biosynthesis of UMP, the precursor of all
                     pyrimidine nucleotides. DHOD requires...; cd04738"
                     /db_xref="CDD:240089"
     Site            order(190,305,345)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:240089"
     CDS             1..374
                     /gene="DHODH"
                     /coded_by="XM_041483763.1:1..1125"
                     /db_xref="GeneID:121362325"
ORIGIN      
        1 mpqhllyptr vageasrecs vrvgdtaalp wlsvplpaav prsrpvrrca psikrgprls
       61 pppllrrywl qgyalrqsrg rggprkcprc waerdggaaa rtaagagagr lragpgigag
      121 grrraalrgg gdaraagaas rgrprpgftr rrpraaalrp srrpraapqe vrvlgqrfrn
      181 plglaagfdk qceavdglyk mgfgfvevgt vtpkpqegnp kprvfrlaed eavinrygfn
      241 shghvaverr lrarqekqir ltgagmplgv nlgknksstd aaadyvagvr tlgpladylv
      301 vnvsspntpg lrdlqgkael rdllskvlve rdllpckrkp avlvkiapdl taqdkqdias
      361 vvceagcpls awve
//
LOCUS       XP_041339709             323 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydroorotate dehydrogenase (quinone), mitochondrial isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339709
VERSION     XP_041339709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="dihydroorotate dehydrogenase (quinone),
                     mitochondrial isoform X5"
                     /calculated_mol_wt=34761
     Region          4..301
                     /region_name="DHOD_2_like"
                     /note="Dihydroorotate dehydrogenase (DHOD) class 2. DHOD
                     catalyzes the oxidation of (S)-dihydroorotate to orotate.
                     This is the fourth step and the only redox reaction in the
                     de novo biosynthesis of UMP, the precursor of all
                     pyrimidine nucleotides. DHOD requires...; cd04738"
                     /db_xref="CDD:240089"
     Site            order(23,27,47,72,74..76,139,142,144,182,210..212,233,262,
                     283..284)
                     /site_type="active"
                     /db_xref="CDD:240089"
     Site            order(27,142,182)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:240089"
     Site            order(47,72,139,182,210..211,233,262,283..284)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:240089"
     Site            order(72,139,141,211..212)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:240089"
     CDS             1..323
                     /gene="DHODH"
                     /coded_by="XM_041483775.1:66..1037"
                     /db_xref="GeneID:121362325"
ORIGIN      
        1 maaplrevrv lgqrfrnplg laagfdkqce avdglykmgf gfvevgtvtp kpqegnpkpr
       61 vfrlaedeav inrygfnshg hvaverrlra rqekqirltg agmplgvnlg knksstdaaa
      121 dyvagvrtlg pladylvvnv sspntpglrd lqgkaelrdl lskvlverdl lpckrkpavl
      181 vkiapdltaq dkqdiasvvc elgvdglivs nttvsrpssl rsrqrtepgg lsgkplrels
      241 tqtiremyal tqgrvpiigv ggvssgqdal ekiragaslv qlytalvyhg ppvvgavkre
      301 leellreqgf knvmeavgad hrc
//
LOCUS       XP_041339722             448 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 821 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339722
VERSION     XP_041339722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="zinc finger protein 821 isoform X1"
                     /calculated_mol_wt=50222
     Region          156..176
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(161,163,165,167..168,171..172,175,193,195,199..200,
                     203..204,207,221,223,225,227..228)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          188..208
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <296..>370
                     /region_name="COG2433"
                     /note="Possible nuclease of RNase H fold, RuvC/YqgF family
                     [General function prediction only]"
                     /db_xref="CDD:441980"
     CDS             1..448
                     /gene="ZNF821"
                     /coded_by="XM_041483788.1:345..1691"
                     /db_xref="GeneID:121362351"
ORIGIN      
        1 msrrkqttpn kvhctgltsa gargwcgrvg kqrselsafq evtpevlhsa geqvfaglee
       61 qarqammknk fpgplgdqrp tirplqdpds sssgsedeet tqdevsshts eedgsmvkvk
      121 kelenterpv agtplirene vpenvnaepi lglsqcplcq lecgsrdqli ahvyqhtgav
      181 vsaksylcpv cgralsspgs lgrhllihse dqlsncavcg arftshatfn seklpevlsa
      241 drlpapqgqg pssaegkdva fctpvypagi llvcnncaay rklleaqtpg mrkwalrrqn
      301 eplevrlqrl erertakksr rdnetpeere vrrmrdreak rlqrmqetde qrarrlqrdr
      361 eamrlkrane tpekrqarli rereakrlkr rlekmdmmlr aqfgqdpsam aalaaemnff
      421 qlpvsnvele sqllgkmtfe eqsnsslh
//
LOCUS       XP_041339731             411 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 821 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339731
VERSION     XP_041339731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483797.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="zinc finger protein 821 isoform X2"
                     /calculated_mol_wt=46479
     Region          119..139
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(124,126,128,130..131,134..135,138,156,158,162..163,
                     166..167,170,184,186,188,190..191)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          151..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <259..>333
                     /region_name="COG2433"
                     /note="Possible nuclease of RNase H fold, RuvC/YqgF family
                     [General function prediction only]"
                     /db_xref="CDD:441980"
     CDS             1..411
                     /gene="ZNF821"
                     /coded_by="XM_041483797.1:345..1580"
                     /db_xref="GeneID:121362351"
ORIGIN      
        1 msrrkqttpn kvhweqvfag leeqarqamm knkfpgplgd qrptirplqd pdssssgsed
       61 eettqdevss htseedgsmv kvkkelente rpvagtplir enevpenvna epilglsqcp
      121 lcqlecgsrd qliahvyqht gavvsaksyl cpvcgralss pgslgrhlli hsedqlsnca
      181 vcgarftsha tfnseklpev lsadrlpapq gqgpssaegk dvafctpvyp agillvcnnc
      241 aayrklleaq tpgmrkwalr rqneplevrl qrlerertak ksrrdnetpe erevrrmrdr
      301 eakrlqrmqe tdeqrarrlq rdreamrlkr anetpekrqa rlirereakr lkrrlekmdm
      361 mlraqfgqdp samaalaaem nffqlpvsnv elesqllgkm tfeeqsnssl h
//
LOCUS       XP_041339739             333 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 821 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339739
VERSION     XP_041339739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="zinc finger protein 821 isoform X3"
                     /calculated_mol_wt=37750
     Region          41..61
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(46,48,50,52..53,56..57,60,78,80,84..85,88..89,92,
                     106,108,110,112..113)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          73..93
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <181..>255
                     /region_name="COG2433"
                     /note="Possible nuclease of RNase H fold, RuvC/YqgF family
                     [General function prediction only]"
                     /db_xref="CDD:441980"
     CDS             1..333
                     /gene="ZNF821"
                     /coded_by="XM_041483805.1:204..1205"
                     /db_xref="GeneID:121362351"
ORIGIN      
        1 mvkvkkelen terpvagtpl irenevpenv naepilglsq cplcqlecgs rdqliahvyq
       61 htgavvsaks ylcpvcgral sspgslgrhl lihsedqlsn cavcgarfts hatfnseklp
      121 evlsadrlpa pqgqgpssae gkdvafctpv ypagillvcn ncaayrklle aqtpgmrkwa
      181 lrrqneplev rlqrlerert akksrrdnet peerevrrmr dreakrlqrm qetdeqrarr
      241 lqrdreamrl kranetpekr qarlirerea krlkrrlekm dmmlraqfgq dpsamaalaa
      301 emnffqlpvs nvelesqllg kmtfeeqsns slh
//
LOCUS       XP_041339750             365 aa            linear   VRT 06-MAY-2021
DEFINITION  IST1 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041339750
VERSION     XP_041339750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..365
                     /product="IST1 homolog isoform X1"
                     /calculated_mol_wt=39709
     Region          12..176
                     /region_name="Ist1"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     pfam03398"
                     /db_xref="CDD:460910"
     CDS             1..365
                     /gene="IST1"
                     /coded_by="XM_041483816.1:138..1235"
                     /db_xref="GeneID:121362367"
ORIGIN      
        1 mlgsgfkaer lrvnlrlvin rlkllekkkt elaqkarkei adylaagkde rarirvehii
       61 redylveame ilelycdlll arfgliqsmk eldsglaeav stliwaaprl qsevaelkiv
      121 adqlcakysk eygklcrtnq igtvndrlmh klsveappki lverylieia knynvpyepd
      181 svvmaeapag geadlidvgf tddvkkgghg agggggftap mighdglvpm pvmmpmpmpt
      241 tnppfsyppp kgpenfsglp vgtyqpftni hpppipanpp tyesidepnt dkdaaalvpg
      301 pepkpeaspk pragapntfd nfvlpelpsv pdtlptasag anssasedid fddlsrrfee
      361 lkkkt
//
LOCUS       XP_041339757             334 aa            linear   VRT 06-MAY-2021
DEFINITION  IST1 homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041339757
VERSION     XP_041339757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="IST1 homolog isoform X2"
                     /calculated_mol_wt=36344
     Region          12..176
                     /region_name="Ist1"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     pfam03398"
                     /db_xref="CDD:460910"
     CDS             1..334
                     /gene="IST1"
                     /coded_by="XM_041483823.1:138..1142"
                     /db_xref="GeneID:121362367"
ORIGIN      
        1 mlgsgfkaer lrvnlrlvin rlkllekkkt elaqkarkei adylaagkde rarirvehii
       61 redylveame ilelycdlll arfgliqsmk eldsglaeav stliwaaprl qsevaelkiv
      121 adqlcakysk eygklcrtnq igtvndrlmh klsveappki lverylieia knynvpyepd
      181 svvmaeapag geadlidvgf tddvkkgghg agggggftap mighdglvpm pvmmpmpmpt
      241 tnppfsyppp kgpidepntd kdaaalvpgp epkpeaspkp ragapntfdn fvlpelpsvp
      301 dtlptasaga nssasedidf ddlsrrfeel kkkt
//
LOCUS       XP_041339767             217 aa            linear   VRT 06-MAY-2021
DEFINITION  IST1 homolog isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041339767
VERSION     XP_041339767.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483833.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="IST1 homolog isoform X3"
                     /calculated_mol_wt=22835
     Region          <1..28
                     /region_name="Ist1"
                     /note="Regulator of Vps4 activity in the MVB pathway;
                     pfam03398"
                     /db_xref="CDD:460910"
     CDS             1..217
                     /gene="IST1"
                     /coded_by="XM_041483833.1:224..877"
                     /db_xref="GeneID:121362367"
ORIGIN      
        1 mhklsveapp kilverylie iaknynvpye pdsvvmaeap aggeadlidv gftddvkkgg
       61 hgagggggft apmighdglv pmpvmmpmpm pttnppfsyp ppkgpenfsg lpvgtyqpft
      121 nihpppipan pptyesidep ntdkdaaalv pgpepkpeas pkpragapnt fdnfvlpelp
      181 svpdtlptas aganssased idfddlsrrf eelkkkt
//
LOCUS       XP_041339780             274 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane emp24 domain-containing protein 6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339780
VERSION     XP_041339780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483846.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="transmembrane emp24 domain-containing protein 6"
                     /calculated_mol_wt=30344
     Region          115..264
                     /region_name="EMP24_GP25L"
                     /note="emp24/gp25L/p24 family/GOLD; pfam01105"
                     /db_xref="CDD:426051"
     CDS             1..274
                     /gene="TMED6"
                     /coded_by="XM_041483846.1:1..825"
                     /db_xref="GeneID:121362382"
ORIGIN      
        1 melfggagss giagssalhc largcgtaeg laqrvpelsp shretpalss pvytelaege
       61 pgqscarqwq lspgsvlgrn tssglgtaps piqtvthrfp wgvlclqvqr atgignnrni
      121 lvtardpngf qlgvsqdvrg qinfvtkdtg fyqlcldnqq nhfglmqvyl nfgvyyddfn
      181 mehkqpaerk elndtleaig msihrlqtht fhmwrfynfa rmrkgadffl lesnynyinw
      241 wsmaqscviv lsgvlqlcfl krlfhvqtsg sqkc
//
LOCUS       XP_041339792             984 aa            linear   VRT 06-MAY-2021
DEFINITION  transport and Golgi organization protein 6 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339792
VERSION     XP_041339792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483858.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..984
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..984
                     /product="transport and Golgi organization protein 6
                     homolog"
                     /calculated_mol_wt=103347
     Region          <554..760
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          725..840
                     /region_name="RTP1_C1"
                     /note="Required for nuclear transport of RNA pol II
                     C-terminus 1; pfam10363"
                     /db_xref="CDD:463059"
     Region          725..749
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(741..742,745,748..749,782..783,786,789..790,793,
                     824..825,828,831..832,835,865..866,869,872..873)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          765..793
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          799..836
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          847..873
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          931..964
                     /region_name="RTP1_C2"
                     /note="Required for nuclear transport of RNA pol II
                     C-terminus 2; pfam10304"
                     /db_xref="CDD:431206"
     CDS             1..984
                     /gene="TANGO6"
                     /coded_by="XM_041483858.1:1..2955"
                     /db_xref="GeneID:121362390"
ORIGIN      
        1 maalpdsapd maggaqpgae parvvealel llgppsavaa lvelarlpal gapllarhlr
       61 lllcglcglg hgpaalcqgv seaeraqcre alrdildrvy qplavqellv lqgqpkqrcp
      121 gagaapawlr rlcghllser llrpggvqav vrgvlegtdg gagaeaaald wrkcdavgki
      181 laacpqqcls ledyyrqvcp qildllhmqd kvaarqfqrv atttllsmar eqpelaerhl
      241 lqpllaplrr ccqatelalq dltagavlvp eaelgscved vlkvyvvgnd ssslllgslq
      301 pvlgvvfsly sfakqnvsyl rspcqdillw flekaereqs lavleslagl sshvptlhpq
      361 cqlrvgsegg aaivleetvs dedealyqki sleqchvesl vellshcqks glagdffihc
      421 lkeltqvaae deeapnpave pggslleleq yqarqgrrll vlqlvaalce gvsdtvftdi
      481 vqvqeflaav lqracahpar gpgaaaeaqt lamamglvaa vlggavqlks sdfavlkrlv
      541 plleelsrty pepltqelas dlriailthg acspgtlgsa adavlgrtag taaqspagta
      601 aqspagtaaq spggtaaqsp ggtatqspgg tatqspggta aqspggtatq spggtaaqsp
      661 ggtaaqspgg taaqspagta pgppaphhgh gspsarrers keqstgrepg aspapgadsl
      721 apaglqellv saydpqppsr aaalrrlasl vtqrdpealr lqekllqvfl envqhedafv
      781 ylsaiqgial lsseyperil pvllaqyecp aqgredtmaa vtrmklgevl mrvtralgdm
      841 vfqhreplih aflrgardpd salrasslsn lgelcqhlgf qlgsiiqevt ccvtaiarsd
      901 peaevrraav hvvvlllrgl sekvtevlrd vlrdlyrllk hvaaaerdaa tllhaqlalq
      961 eldaavrrvl fppqtlekki vvlp
//
LOCUS       XP_041339805            1745 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein LOC121362397
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339805
VERSION     XP_041339805.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483871.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 11% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1745
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     LOC121362397"
                     /calculated_mol_wt=189461
     Region          <1..45
                     /region_name="CA_like"
                     /note="Cadherin repeat-like domain; cl46864"
                     /db_xref="CDD:481204"
     Region          53..158
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(60..61,121,123,154,156..157)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          166..299
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(173..174,260,262,296,298..299)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          310..390
                     /region_name="Cadherin"
                     /note="Cadherin domain; pfam00028"
                     /db_xref="CDD:394985"
     Site            order(314..315,366,368,403,405..406)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          416..501
                     /region_name="Cadherin"
                     /note="Cadherin domain; pfam00028"
                     /db_xref="CDD:394985"
     Region          631..690
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     Region          858..946
                     /region_name="Cadherin_pro"
                     /note="Cadherin prodomain like; cl07391"
                     /db_xref="CDD:471661"
     Region          986..1086
                     /region_name="CA_like"
                     /note="Cadherin repeat-like domain; cd00031"
                     /db_xref="CDD:206635"
     Site            order(993..994,1049,1051,1082,1084..1085)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206635"
     Region          1094..1198
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1101..1102,1161,1163,1194,1196..1197)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1206..1337
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1213..1214,1298,1300,1334,1336..1337)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1347..1428
                     /region_name="Cadherin"
                     /note="Cadherin domain; pfam00028"
                     /db_xref="CDD:394985"
     Region          1453..1548
                     /region_name="CA_like"
                     /note="Cadherin repeat-like domain; cl46864"
                     /db_xref="CDD:481204"
     Region          1680..1739
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     CDS             1..1745
                     /gene="LOC121362397"
                     /coded_by="XM_041483871.1:103..5340"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121362397"
ORIGIN      
        1 mkvtqpldre hidkyhlfsh avsengkpve epmeiivtvt dqndnkpqft qevfrgsvpe
       61 galpgtsimq vtatdaddav etyngviays ilsqepreph pqmftvnrat gtlsviasgl
      121 drervreytl tvqaadldgd gltttalavi eiadvndnap efdpktyeaa vpenvagrev
      181 arlavtdlde pgtpawravy silrgndgga faittdpatn egilrtakvc atpchpiaaq
      241 gesclshshc pclplsqgld yeakqqfvlh vavanevpfv vklpmatatv tvtvedvnea
      301 pvfvppvqla tvsedappgq tltactaqdp dkaqdqriky vvghdpagwl avhpenglvt
      361 ardhldresp fvknstymav llavddgspp atgtgtlllt lldvndngpe aeprditvcq
      421 rspqpqlltv tdrdlppntg pfraelthgs edswavevgd tgdtvtlqlv aplepdtysv
      481 ylrlldqpgr aqvtvvtarv cacegqaqgc pqrsqpvtal pfvlaalgal lallllllll
      541 llfmrrrkvt keplllpedd trdnifyyge egggeedqny dlrqlhrgld arpevirndv
      601 aptllpapqy rprpanpddi gtfidenlka adtdptappy dsllvfdyeg sgseatslss
      661 lnssasdgdq dydylndwgg rfrklaelyg ggeeddlpga gghwryhgtg drgrstapvp
      721 wgvpgyrase apgipgfrvr agrdrlpsgr dgavlggvdt ceegsggdrt hlrlrggsar
      781 slrhqpapaa apamgrragc svplcllvll lqvshgtgrq dpaetlpgaa gprsgpcpvl
      841 tslsgqsgqr lcqraascqp gfaaetfalt aprdsvaagr algrvsfmdc gesrraaflp
      901 ddtrfkvsrd givsatrplq lqqrditfav htwdttgkkh sakvtlrprr hqhrhhermq
      961 qgtvpdvlif pehghglrrq krdwvippin cpenergpfp kklvqiksnk dketkvfysi
     1021 tgqgadtipv gvfiieretg wlevtkpldr eekdkyvlys havsangqpv edpmeiiitv
     1081 tdqndnrpvf tqqvfvgyie enakpgtsvm tvnatdadda invnngiigy siqseepkga
     1141 qrmftinaek giisvigtgl drettpnytl iiqaadqegt gltntataii kvtdandnpp
     1201 vfdpstyeea vdenevgvlv arlhvtdqdl pgspawravy riqsgdpqgn feittdpktn
     1261 dgllktarvg paatrlpqhq ltpcwhylds lpxpqgldye tqnryklvvs vqnevpftva
     1321 lnpatanvlv vvrdvneapi fippvkqvev medvpvgyqv tsytaqdpdk dqrqkityrm
     1381 gsdpagwlai dpengivtaa hpldresaha instykaivl avdngspnyg tgtgtlllll
     1441 qdvndngpvp eprsfdicnr qpeeqtlkii dkdlppnthp fkaelmhgsg snwtasmtfs
     1501 npndsvvhqd evklsmkkel epgeysiflk lldaqgkdqi tavraqvcsc egpakncerr
     1561 ayisggmgvp ailgilggil allillllll lfvrrrkvvk epllppeddm rdnvyhydee
     1621 gggeedqdyd lsqlhrglda rpevirndva pplmaapqyr prpanpdeig nfidenlkaa
     1681 dtdptappyd sllvfdyegs gseatslssl nssasdgdqd ydylndwggr frklaelygg
     1741 geedd
//
LOCUS       XP_041339817             143 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxyisourate hydrolase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041339817
VERSION     XP_041339817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483883.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 20% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..143
                     /product="5-hydroxyisourate hydrolase-like"
                     /calculated_mol_wt=15297
     Region          31..143
                     /region_name="TLP_HIUase"
                     /note="HIUase (5-hydroxyisourate hydrolase) catalyzes the
                     second step in a three-step ureide pathway in which
                     5-hydroxyisourate (HIU), a product of the uricase (urate
                     oxidase) reaction, is hydrolyzed to
                     2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU);
                     cd05822"
                     /db_xref="CDD:100114"
     Site            order(36,38,76,127,129,131,140)
                     /site_type="active"
                     /db_xref="CDD:100114"
     Site            order(40..43,109..110,112,116..118,133,135..141)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:100114"
     CDS             1..143
                     /gene="LOC121362407"
                     /coded_by="XM_041483883.1:1..432"
                     /db_xref="GeneID:121362407"
ORIGIN      
        1 mafcvgspat gpwpsgteds qadgmsevgk gtltthvlnt atglpaaglv irlaqlqepg
       61 lqwtelahrh tdadgrcqpl lapgqakagt yklhfetaey wqglghtsfy pfvevvfvit
      121 dparklhvpl lispysytty rgs
//
LOCUS       XP_041339831             753 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin beta-3 chain [Pyrgilauda ruficollis].
ACCESSION   XP_041339831
VERSION     XP_041339831.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483897.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="tubulin beta-3 chain"
                     /calculated_mol_wt=84130
     Region          37..306
                     /region_name="7tmA_MC1R"
                     /note="melanocortin receptor subtype 1, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15351"
                     /db_xref="CDD:320473"
     Region          38..64
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320473"
     Region          71..97
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320473"
     Site            order(93,118..119,122..123,126,190,251,258,278,281)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320473"
     Region          115..145
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320473"
     Region          157..177
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320473"
     Region          182..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320473"
     Region          231..261
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320473"
     Region          274..299
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320473"
     Region          321..752
                     /region_name="PLN00220"
                     /note="tubulin beta chain; Provisional"
                     /db_xref="CDD:215107"
     CDS             1..753
                     /gene="TUBB3"
                     /coded_by="XM_041483897.1:1..2262"
                     /db_xref="GeneID:121362413"
ORIGIN      
        1 mstlaplrll repsnasegn hsnttvgagg gwcqgldipn elflalglvs lvenllvvaa
       61 ilknrnlhsp tyyficclav sdmlvsisnl aemlfmllle hgvlvmrpsi vrhmdsvidt
      121 licssvvssl sflgviavdr yitifyalry hsimtlqrav vtmasvwlas tvssavlity
      181 yrsntvllcl igfflfmlvl mlvlyihmfa larhhlhsis sqqkpptahr ggslkgavtl
      241 tillgvffic wgpfffhlil ivtcptnpfc tcffsyfnlf liliicnsvi dpliyafrsq
      301 elrrtlrevv tcswtrlgrv spfwevisde hgidpsgnyv gdsdlqleri svyyneassh
      361 kyvprailvd lepgtmdsvr sgafghlfrp dnfifgqsga gnnwakghyt egaelvdsvl
      421 dvvrkecenc dclqgfqlth slgggtgsgm gtlliskvre eypdrimntf svvpspkvsd
      481 tvvepynatl svhqlventd etycidneal ydicfrtlkl atptygdlnh lvsatmsgvt
      541 tslrfpgqln adlrklavnm vpfprlhffm pgfapltarg sqqyraltvp eltqqmfdak
      601 nmmaacdprh gryltvatvf rgrmsmkevd eqmlaiqskn ssyfvewipn nvkvavcdip
      661 prglkmsstf ignstaiqel fkriseqfta mfrrkaflhw ytgegmdeme fteaesnmnd
      721 lvseyqqyqd ataeeegemy eddeeeseaq gak
//
LOCUS       XP_041339844             600 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 276, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041339844
VERSION     XP_041339844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483910.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..600
                     /product="zinc finger protein 276"
     Region          39..123
                     /region_name="zf-AD"
                     /note="Zinc-finger associated domain (zf-AD); cl07874"
                     /db_xref="CDD:471776"
     Region          <247..>331
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          <310..500
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          451..471
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          479..499
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(484,486,488,490..491,494..495,498,512,514,518..519,
                     522..523,526,542,544,546,548..549,552..553)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          507..527
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          537..554
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..600
                     /gene="ZNF276"
                     /coded_by="XM_041483910.1:<1..1803"
                     /db_xref="GeneID:121362418"
ORIGIN      
        1 paprrtpgta argsepaepp aatacapeag tgralstgyc rlchgkfssr slrnafgkvp
       61 vlgensekqr rldqvffadf qrlvgvavrq dpalpqfvck kchaqfykcr svlrtfiqrv
      121 nasptghaks kgkssgvqaq pgmeggascl vdlitsspqc lhslvawtha haggcasvpa
      181 lrsvlsseyc giiravwgcg dghdyvmdtd sdcssvlldn alavkrewsk gsaqqrltdn
      241 gagadnaeav papkaqhapv rtapcqqpan kgttavplsv eheppqdrdp spsqldsaas
      301 vreqalpqpv splsaatgql sgkqvlsats dervkdefsd lsegdflsdd esekrnvqss
      361 ddsfepypek kvsgkksdsk eakkaeepki rkkpgpkpgw kkkikceree lptiykcpyq
      421 gctavyrgad gmkkhikehh eevrerpcph pgcnkvfmid rylqrhvkli htevrnyicd
      481 ecgqtfkqrk hlsvhqmrhs gakplqceic gfqcrqrasl kyhmtkhkae aelefacdqc
      541 gkrfekahnl nvhmsmvhpl tqtqdkgkal epeplllltp agtaegqavk pevtaepept
//
LOCUS       XP_041339858             378 aa            linear   VRT 06-MAY-2021
DEFINITION  spermatogenesis-associated protein 2-like protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339858
VERSION     XP_041339858.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483924.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="spermatogenesis-associated protein 2-like
                     protein"
                     /calculated_mol_wt=41906
     CDS             1..378
                     /gene="SPATA2L"
                     /coded_by="XM_041483924.1:1..1137"
                     /db_xref="GeneID:121362426"
ORIGIN      
        1 mcagsalrqe hrqdygqefr qefhqeyrrs lerelgpagt cpgpaaaerl rqrlqqepal
       61 lealqedala llarglrdhp dpglalrgla safrllelaa vnlylfpwrr efgtiptfsg
      121 ayvhllrpal peadlvrslg rlgyerqdrh rlaverlppg paliaaavgf lacrleceil
      181 aelaprlrcp raeellearh raggakgcle mlqdlgtrpr aaadcgdsvd lyrespdspe
      241 dtgskdtapp epwrdpqdvp trgwgrcdst lapepvgstd pdtsshlfpe relgeprdcp
      301 qatpelpcyq lhsclqrgml psyccstcrq lhgggcalgr acrsrhrgqe lrgerqqrlw
      361 lqrteldmll akgpaprs
//
LOCUS       XP_041339870             552 aa            linear   VRT 06-MAY-2021
DEFINITION  copine-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041339870
VERSION     XP_041339870.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483936.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..552
                     /product="copine-7"
                     /calculated_mol_wt=61547
     Region          33..151
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(48,54,106,108,119)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     Region          166..278
                     /region_name="C2B_Copine"
                     /note="C2 domain second repeat in Copine; cd04047"
                     /db_xref="CDD:176012"
     Site            order(181,187,243,245,251)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176012"
     Region          337..532
                     /region_name="Copine"
                     /note="pfam07002"
                     /db_xref="CDD:462064"
     CDS             1..552
                     /gene="CPNE7"
                     /coded_by="XM_041483936.1:1..1659"
                     /db_xref="GeneID:121362433"
ORIGIN      
        1 mpfahgaaga pprpagmgdv pepcpqapla vlskvelrvs ckhlldrdtl nksdpcvlll
       61 mqsqgqwmev drseviksnl npvfakiftv dyyfeevqkl rfevydshgq agvgthdddf
      121 lggmectvgq ivaqkrvtkp lflkygkfag kstitiisee isgnngyvel afrakklddk
      181 dlfsksdpfl eiyridddrs eqlvyrtevv knnlspiwep fkvslnslcs ceekrklrcv
      241 vwdydsrgkh dfigeffttf eemqkamgen kvqwdcmnpk ykikkrnykn sgvvvlldlk
      301 ihrvysfldy imggcqihft vaidftasng dprnscslhy inpyqpneyl kalvavgeic
      361 qdydsdkkfs algfgaripp kyevshdfai nfnpdndece giqgvvesyq sclpkiqlyg
      421 ptnvapiisk varvaadeer tkeasqyfil liltdgvvtd madtreaivr asylpmsiii
      481 vgvgnadftd mqildgddgv lrspkgepvl rdivqfvpfr efknvsgaat ssclpppapp
      541 aktpgpspsv pq
//
LOCUS       XP_041339883            2483 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat domain-containing protein 11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339883
VERSION     XP_041339883.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483949.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2483
                     /product="ankyrin repeat domain-containing protein 11"
                     /calculated_mol_wt=280278
     Region          <161..>249
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(167,169,173..174,177..179,181..182,186,189,198,200,
                     202,206..207,210..212,214..215,219,222,231,233,235,
                     239..240,243..245,247..248)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          167..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          200..231
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <693..1265
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <1466..1880
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1993..>2212
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     CDS             1..2483
                     /gene="ANKRD11"
                     /coded_by="XM_041483949.1:342..7793"
                     /db_xref="GeneID:121362441"
ORIGIN      
        1 mpkggcsktp qsedfslsnd mvekqtgkkd kdkvsltktp kldrsdggke vkeratkrkl
       61 pftvgtngdq kdsdtekqgp erkrikkepa trkpgllfgm glsgiragyp lserqqvall
      121 mqmtaeesan spvdttpkhp sqstvcqkgt pnsasktkdk vnkrnerget rlhraairgd
      181 arrikeliie gadvnvkdfa gwtalheacn rgyydvakql laagaevntk gldddtplhd
      241 aannghfkvr sesenvesee ddrdslqsss cvkdsrlvlk esslfnslsa sstsshgsla
      301 sqkhnpslte qhskhwrtdn wktisspaws dvsslsdstr trltsesdys sedssleslk
      361 pvrkkpehkk kntphntvse kknsfhsnvd gaipkldkeg kvvkkhktkh khknkekgqc
      421 pisqdikiik tfsfefedsk qkpekglive tenpvenklk vlkhdrehgk keeklpkgka
      481 eekewlfkde tgksskeeks lrkikdgskd lsksfregls ksekekpvke kspkeekpri
      541 hkeerkkksk dkqsksekkn elkeekvskl ekeksfkeek ekckkeklyr desgfdefnn
      601 ktqfaesedt kfslsddqqe rwfsdlssds sfdfkgedsw dspitdfrei kndtvaklii
      661 epvkeeikdk kkenkmkdkk eynekrnekd tflkkkerdy vekssekkkd qtdrhkvtps
      721 ylpekdkkrk dsvetgkerk ekdtgetnkd rkdssdgske rkdpktkqee pyrddfkeyg
      781 cetffkdksd pefsgktles werhhsgkek ekkdapdkek kekvkpekyk ekskegdkek
      841 nekaapekil kdkeleksfk ekketkekyk dlhgkdkerk ssfdqvkekk eknfsadrdd
      901 fsekkdekkg kekswysiad iftdeseder ddyslsgfkv gdsagsemhr ldslqdkddg
      961 aaaekelypd khrkyssdrq hsekqkdkes kekkkdkgts eggkekkeks sfekhkekkd
     1021 kdssekykdr kermsidstq ekknkqklpe kvekkhtsdd kvkskhkekp dkehskekks
     1081 skggeseksl lekleeealn dyrddsndki seissdsftd rgqepgltsl fessnlsltd
     1141 aaeekfkdsl plpclqdklk ekerhrhsss sskkshekek akkektekke kseefkdsss
     1201 rkdsthyekd fsvdgeafgs synmkadade epeksidylf sekkdkndse relskkaeke
     1261 ktygsstist akekkkrdkh kekwkeekek hrdkhtdgff khhkdepkst lkdkdgpqvt
     1321 tfkdkskedn lkfgetklke klkenqdkdk sesikisngn ekitlskdsg kkdarprekl
     1381 lgdgdlmmts fermlsqkdl eieerhkrhk ermkqmekmr hrsgdpklkd klkssedvrk
     1441 rsldlpakkp ltldtqlkdk klkelgpltp ilspenkaqp avgtdskdwi tgpqlkeilp
     1501 asprpdqnrp tgvptpasvv scpsyeevmq tprtpscsne dytdlmfeca dsqhslpist
     1561 msmnacspsf fdrysnvssg lpenpsqtpt rtipssnlyr sisvdirrap eeefsvgdkf
     1621 frqqsvpats nydspvqhlm eekvplpsvp aekfqclspg yyspdygvss pkvealhcap
     1681 gavsgvaqsp esvfsglqak sspshrdell apsvesalpp digmpldtte eqqatasimp
     1741 pestylppie enhfssgmpe qnnidwdnpp srnpdaaipp slmgnpaehs vtwsmgsell
     1801 mkspqrfses pkpplcslep ihpapvafip tetsypvspi syplsvsepr leevkedaee
     1861 avpgeianae eqapymsptr ldtffnnckp lpeeapeipp eppcvpaepq aevvaapens
     1921 ylennnaapa naeeavtwpd pftntedeld lgpfslpelp lqpkdvaete mteaeaaees
     1981 paaapeasag iikagasvia sgepeeppas qaaptlptdt eppaeeqkpe aaaqeaasea
     2041 lnaaeekaae dseaqvfqqp psepaqaesk eveavheels aggvaegssq pcpvpvasse
     2101 agvpqdgaaa rggsqapppq adappsnaqa eivepvqkpv aeapkppkie eipqritrnr
     2161 aqmlanqnkq naaasekefp pvsapvtrak griteeddsq aqhprkrrfq rsnqqlqqqi
     2221 ntstqqtrem iqqtlaaivd aiklddiepy hsdrsnpyfe ylqirkkiee krkilcyitp
     2281 qapqcyaeyv tytgsylldg kplsklhipv iapppslaep lkelfkqqea vrgklrlqhs
     2341 iereklivsc eqeilrvhcr aartianqav pfsactmlld sevynmplen qgdenksvrd
     2401 rfnarqfisw lqdvddkydr mktcllmrqq heaaalnavq rmewqlkvqe ldpaghkslc
     2461 vnevpsfyvp mvdvnddfvl lpa
//
LOCUS       XP_041339895              98 aa            linear   VRT 06-MAY-2021
DEFINITION  diphosphomevalonate decarboxylase [Pyrgilauda ruficollis].
ACCESSION   XP_041339895
VERSION     XP_041339895.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483961.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..98
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..98
                     /product="diphosphomevalonate decarboxylase"
                     /calculated_mol_wt=10411
     Region          9..>85
                     /region_name="MDD_C"
                     /note="Mevalonate 5-diphosphate decarboxylase C-terminal
                     domain; cl28577"
                     /db_xref="CDD:475042"
     CDS             1..98
                     /gene="MVD"
                     /coded_by="XM_041483961.1:276..572"
                     /db_xref="GeneID:121362450"
ORIGIN      
        1 maaeralama tctapvniav ikywgkrdtd lilpinssls vtlhqdqlkt tttaaasrdf
       61 tedrlwlngk eadvghprvq aclregecpl pggvpavp
//
LOCUS       XP_041339906             177 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-17C, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041339906
VERSION     XP_041339906.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483972.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..177
                     /product="interleukin-17C"
     Region          87..171
                     /region_name="IL17"
                     /note="Interleukin-17; pfam06083"
                     /db_xref="CDD:461823"
     CDS             1..177
                     /gene="IL17C"
                     /coded_by="XM_041483972.1:<1..534"
                     /db_xref="GeneID:121362460"
ORIGIN      
        1 splrragggs ghsavrcysg aelgdeapap llgrrlrwar hvsvqllprl erlerpepgg
       61 arrrrqlppa cpalplragl rgephersis pwryridede nryprklafa eclcsgcvdv
      121 ktgrettsln svtiqqtmlv lrrkpcprpa apglvalevd yirvpvgctc vlprtar
//
LOCUS       XP_041339919             576 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 8 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339919
VERSION     XP_041339919.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483985.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..576
                     /product="conserved oligomeric Golgi complex subunit 8
                     isoform X1"
                     /calculated_mol_wt=63026
     Region          29..339
                     /region_name="Dor1"
                     /note="Dor1-like family; pfam04124"
                     /db_xref="CDD:427729"
     CDS             1..576
                     /gene="COG8"
                     /coded_by="XM_041483985.1:34..1764"
                     /db_xref="GeneID:121362467"
ORIGIN      
        1 maaaaeearl lawlrgpaap ggpelaayvs elaalglael greparlaae rarvgaetrr
       61 lafehyrafi rsaectgrag rgfggiesrl gsllerlpal qdacrtfmrd aeaiacsrrm
      121 nsltlnrhte ileileipql mdtcvrngyy eealeltayv rrlerkhssi pviqgiveev
      181 rqsaqlmlnq liqqlrtnip lpaclrvigf lrrmdvltea elrvkflqar dawlrstqas
      241 ipdhdpyvhi tktieacrvh lfdivtqyra ifsdeeplvp aeapgegaif hswvlqkvse
      301 flrtlrrdle rgaggrldsl lgqcmyfgls fsrvgvdfrg qlaplfqrva adafrkavee
      361 avekfreemn sytlisapav lgggagvpvp taqpgtlqpp mvlldfppla cflngllvaf
      421 ndlrlccpia laqdvtncld salgevtkti lafhraeeaa fsgreqelft qfctafledl
      481 lpylnrclqv lfppaqiaqa lgvpptqlqr fgrlgridva alreplafll ppapgeeeps
      541 petapdpege haavpteppe spsaeaalpg apvatg
//
LOCUS       XP_041339929             610 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339929
VERSION     XP_041339929.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041483995.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..610
                     /product="conserved oligomeric Golgi complex subunit 8
                     isoform X2"
                     /calculated_mol_wt=67361
     Region          29..339
                     /region_name="Dor1"
                     /note="Dor1-like family; pfam04124"
                     /db_xref="CDD:427729"
     Region          <569..598
                     /region_name="Def"
                     /note="Peptide deformylase [Translation, ribosomal
                     structure and biogenesis]; COG0242"
                     /db_xref="CDD:440012"
     CDS             1..610
                     /gene="COG8"
                     /coded_by="XM_041483995.1:34..1866"
                     /db_xref="GeneID:121362467"
ORIGIN      
        1 maaaaeearl lawlrgpaap ggpelaayvs elaalglael greparlaae rarvgaetrr
       61 lafehyrafi rsaectgrag rgfggiesrl gsllerlpal qdacrtfmrd aeaiacsrrm
      121 nsltlnrhte ileileipql mdtcvrngyy eealeltayv rrlerkhssi pviqgiveev
      181 rqsaqlmlnq liqqlrtnip lpaclrvigf lrrmdvltea elrvkflqar dawlrstqas
      241 ipdhdpyvhi tktieacrvh lfdivtqyra ifsdeeplvp aeapgegaif hswvlqkvse
      301 flrtlrrdle rgaggrldsl lgqcmyfgls fsrvgvdfrg qlaplfqrva adafrkavee
      361 avekfreemn sytlisapav lgggagvpvp taqpgtlqpp mvlldfppla cflngllvaf
      421 ndlrlccpia laqdvtncld salgevtkti lafhraeeaa fsgreqelft qfctafledl
      481 lpylnrclqv lfppaqiaqa lgvpptqlqr fgrlgridva alreplafll ppapgeeeps
      541 petapdpege haavpteppe spsaeaalwe asgwaariiq hemdhldgil yidrmdprtf
      601 tnvgwmelld
//
LOCUS       XP_041339937             553 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 8 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339937
VERSION     XP_041339937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484003.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..553
                     /product="conserved oligomeric Golgi complex subunit 8
                     isoform X3"
                     /calculated_mol_wt=61357
     Region          29..339
                     /region_name="Dor1"
                     /note="Dor1-like family; pfam04124"
                     /db_xref="CDD:427729"
     Region          <502..541
                     /region_name="Def"
                     /note="Peptide deformylase [Translation, ribosomal
                     structure and biogenesis]; COG0242"
                     /db_xref="CDD:440012"
     CDS             1..553
                     /gene="COG8"
                     /coded_by="XM_041484003.1:33..1694"
                     /db_xref="GeneID:121362467"
ORIGIN      
        1 maaaaeearl lawlrgpaap ggpelaayvs elaalglael greparlaae rarvgaetrr
       61 lafehyrafi rsaectgrag rgfggiesrl gsllerlpal qdacrtfmrd aeaiacsrrm
      121 nsltlnrhte ileileipql mdtcvrngyy eealeltayv rrlerkhssi pviqgiveev
      181 rqsaqlmlnq liqqlrtnip lpaclrvigf lrrmdvltea elrvkflqar dawlrstqas
      241 ipdhdpyvhi tktieacrvh lfdivtqyra ifsdeeplvp aeapgegaif hswvlqkvse
      301 flrtlrrdle rgaggrldsl lgqcmyfgls fsrvgvdfrg qlaplfqrva adafrkavee
      361 avekfreemn sytlisapav lgggagvpvp taqpgtlqpp mvlldfppla cflngllvaf
      421 ndlrlccpia laqdvtncld salgevtkti lafhraeeaa fsgreqelft qfctafledl
      481 lpylnrclqv lfppaqiaqa lgvdelgvpv sweasgwaar iiqhemdhld gilyidrmdp
      541 rtftnvgwme lld
//
LOCUS       XP_041339952             437 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 4A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339952
VERSION     XP_041339952.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484018.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..437
                     /product="vacuolar protein sorting-associated protein 4A"
                     /calculated_mol_wt=48732
     Region          4..79
                     /region_name="MIT_VPS4"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in intracellular protein transport
                     proteins of the AAA-ATPase family. The molecular function
                     of the MIT domain is unclear; cd02678"
                     /db_xref="CDD:239141"
     Region          121..291
                     /region_name="RecA-like_VPS4"
                     /note="ATPase domain of vacuolar protein
                     sorting-associated protein 4; cd19521"
                     /db_xref="CDD:410929"
     Site            order(122,141,145,148..149,153,157,169..170,174,178,189,
                     191,193..195,198,206,227..228,231,236,238,240..242,
                     244..246,249..250,273,276)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:410929"
     Site            order(128..130,132,169..175,227,272)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410929"
     Region          316..359
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          374..434
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..437
                     /gene="VPS4A"
                     /coded_by="XM_041484018.1:131..1444"
                     /db_xref="GeneID:121362479"
ORIGIN      
        1 mttstlqkai dlvtkateed raknyeealr lyqhaveyfl haikyeahsd kakesirakc
       61 vqyldraekl keylrgkdrh gkrpvreaqn dnkgsdsdse genpekkklq eqlmgaimme
      121 kpnvrwsdva glegakealk eavilpikfp hlftgkrtpw rgillfgppg tgksylakav
      181 ateannstff svsssdltsk wlgeseklvk nlfelarqhk psiifidevd slcgsrnene
      241 seaarrikte flvqmqgvgn ssdgilvlga tnipwvldsa irrrfekriy iplpeeaara
      301 qmfrlhlgnt phsltdaniq elarktdgys gadisiivrd almqpvrkvq sathfkkvrg
      361 psrttpgaiv ddlltpcspg dpgatemtwm evpsdklmep vvcmsdmlrs lattrptvna
      421 edllkvkkft edfgqeg
//
LOCUS       XP_041339966             209 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosome subunit biogenesis protein NIP7 homolog isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339966
VERSION     XP_041339966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="60S ribosome subunit biogenesis protein NIP7
                     homolog isoform X1"
                     /calculated_mol_wt=22786
     Region          <49..117
                     /region_name="Nip7_N_euk"
                     /note="N-terminal domain of eukaryotic 60S ribosome
                     subunit biogenesis protein Nip7 and similar proteins;
                     cd21146"
                     /db_xref="CDD:409283"
     Region          124..201
                     /region_name="PUA_Nip7-like"
                     /note="PUA RNA binding domain of ribosome assembly factor
                     Nip7 and similar proteins; cd21151"
                     /db_xref="CDD:409293"
     Site            order(129,135,137..139,141..143,192..195)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409293"
     CDS             1..209
                     /gene="NIP7"
                     /coded_by="XM_041484032.1:79..708"
                     /db_xref="GeneID:121362481"
ORIGIN      
        1 mgtgkaglag srgtgrprvw whrgsggsrh gryggrrggp gsrlcpcsig eniqllvdrp
       61 dgtycfrlhr drvyylsekl lklaasvpre slvapgtcfg kftksqkfrl svtaldflap
      121 yakykvwvkp gseqsflygn hvlksglgri tentaqyqgv vvysmadvpl gfgvaakstq
      181 ecrkvdplai vvfhqadvge yvrnedtlt
//
LOCUS       XP_041339976             180 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosome subunit biogenesis protein NIP7 homolog isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041339976
VERSION     XP_041339976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..180
                     /product="60S ribosome subunit biogenesis protein NIP7
                     homolog isoform X2"
                     /calculated_mol_wt=20074
     Region          2..88
                     /region_name="Nip7_N_euk"
                     /note="N-terminal domain of eukaryotic 60S ribosome
                     subunit biogenesis protein Nip7 and similar proteins;
                     cd21146"
                     /db_xref="CDD:409283"
     Site            order(18..19,83..84,86)
                     /site_type="other"
                     /note="PUA domain interface [polypeptide binding]"
                     /db_xref="CDD:409283"
     Region          95..172
                     /region_name="PUA_Nip7-like"
                     /note="PUA RNA binding domain of ribosome assembly factor
                     Nip7 and similar proteins; cd21151"
                     /db_xref="CDD:409293"
     Site            order(100,106,108..110,112..114,163..166)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409293"
     CDS             1..180
                     /gene="NIP7"
                     /coded_by="XM_041484042.1:51..593"
                     /db_xref="GeneID:121362481"
ORIGIN      
        1 mrplteaetr avfeklgkyi geniqllvdr pdgtycfrlh rdrvyylsek llklaasvpr
       61 eslvapgtcf gkftksqkfr lsvtaldfla pyakykvwvk pgseqsflyg nhvlksglgr
      121 itentaqyqg vvvysmadvp lgfgvaakst qecrkvdpla ivvfhqadvg eyvrnedtlt
//
LOCUS       XP_041339988            1450 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear factor of activated T-cells 5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339988
VERSION     XP_041339988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484054.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1450
                     /product="nuclear factor of activated T-cells 5 isoform
                     X1"
                     /calculated_mol_wt=155352
     Region          233..393
                     /region_name="RHD-n_TonEBP"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD) of tonicity-responsive enhancer binding protein
                     (TonEBP); cd07882"
                     /db_xref="CDD:143642"
     Site            order(246,249,251..256,342,344..345,360,362,393)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143642"
     Region          397..496
                     /region_name="IPT_NFAT"
                     /note="IPT domain of the NFAT family of transcription
                     factors. NFAT transcription complexes are a target of
                     calcineurin, a calcium dependent phosphatase, and activate
                     genes mainly involved in cell-cell-interaction; cd01178"
                     /db_xref="CDD:238583"
     Site            order(421,484)
                     /site_type="DNA binding"
                     /note="DNA binding sites [nucleotide binding]"
                     /db_xref="CDD:238583"
     Region          1225..>1422
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1450
                     /gene="NFAT5"
                     /coded_by="XM_041484054.1:64..4416"
                     /db_xref="GeneID:121362490"
ORIGIN      
        1 msqtsggeag spppavvaad assapssssm ggacssftts ssptiystsv tdskamqves
       61 csaavgvstr gvseqqitsn taqqhpatpk rhtvlyispp pedlldnsrm scqdegcgle
      121 seqscsmwme dspsnfsnms tssyndntev prksrkrnpk qrpgikrrdc eesnmdifda
      181 dsakaphyvl sqlstdsksn skagngasen qkgaggkktp mlcgqyptks egkelkimvq
      241 petqhraryl tegsrgsvkd rtqqgfptvk leghnepvvl qvfvgndsgr vkphgfyqac
      301 rvtgrnttpc kevdiegttv ievgldpsnn mtlavdcvgi lklrnadvea rigiagskkk
      361 strarlvfrv nitrkdgstl tlqtpsspil ctqpagvpei lkkslhscsv kgeeevflig
      421 knflkgtkvi fqenvsdens wkaeaeidme lfhqnhlivk vppyhdqqit savsvgiyvv
      481 tnagrshdvq pftytpepag tlnvnvkkei sspaqhcsfe eaikavkatg cnlekvnilp
      541 salitplmps smiknedvap measnvvgpt qqtlensmsg istsashlps esenqqqiqp
      601 kvynpetlst iqtqdisqpg sfsavstpgq lqnsdallqq aaqfqtrdsq prevlqsdgt
      661 vvtlsqltda sqqqqptlse paqalqqqis ssifssasgv sqlqntiqql qagnfptnta
      721 tgssrnvdlv qqvleaqqql ssvlfsgsds sedvqdqlna difqqvsqiq nsvnpgmfss
      781 sdtavhsrpe nllpgraesv rsqpegalsn qqqqqqqqam etsaamvmgm qqnmcqaatq
      841 mqsdlfssst agngalqqsp vyqqashmmg glsssedmqm qcelfssspg vsggeaaapa
      901 qqpvssngaa mfqpsssaeg eeasgqskqm qssvfqtmvq mqhsgesqsq vnlfsstktm
      961 msvqasgtqq qggglfqqgg emmsiqsgsf iqqsphsqaq lfhsqnpigd tqnisqetqg
     1021 slfhssnsiv hnqtntnssd qlqppmfhsq namgvlqsss vpqdqqsanm flsqssmsnp
     1081 atqeeqmsff tspnpisplq tatnteqqts fqqqtqishi qssmlpqeqp qtqpaqqglf
     1141 qsqvslgsmq sssipqnqqg aifqpqhsiv aiqssppsqe qqqqqqqnmm fsnqnamstm
     1201 apqkqnmifn pnqnpvtnqe qqgqsifhpq snmasmnqeq qpmqfqsqtt vsslqnpgss
     1261 qaeaqqptif hnspqiqlvq gspssqeqqv tlfissasms alqnsmsqpe lqqspmyssq
     1321 nsmagmpgta sppqqqaplf hstaggainq lqnspassqq tsgiflfgiq nncgqllpag
     1381 paalpeelma mgqpgqpqge aqpavpalls qqlpetpplp samaanqnme kiddllvslq
     1441 nqgnnmagsf
//
LOCUS       XP_041339997            1450 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear factor of activated T-cells 5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041339997
VERSION     XP_041339997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484063.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1450
                     /product="nuclear factor of activated T-cells 5 isoform
                     X1"
                     /calculated_mol_wt=155352
     Region          233..393
                     /region_name="RHD-n_TonEBP"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD) of tonicity-responsive enhancer binding protein
                     (TonEBP); cd07882"
                     /db_xref="CDD:143642"
     Site            order(246,249,251..256,342,344..345,360,362,393)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143642"
     Region          397..496
                     /region_name="IPT_NFAT"
                     /note="IPT domain of the NFAT family of transcription
                     factors. NFAT transcription complexes are a target of
                     calcineurin, a calcium dependent phosphatase, and activate
                     genes mainly involved in cell-cell-interaction; cd01178"
                     /db_xref="CDD:238583"
     Site            order(421,484)
                     /site_type="DNA binding"
                     /note="DNA binding sites [nucleotide binding]"
                     /db_xref="CDD:238583"
     Region          1225..>1422
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1450
                     /gene="NFAT5"
                     /coded_by="XM_041484063.1:64..4416"
                     /db_xref="GeneID:121362490"
ORIGIN      
        1 msqtsggeag spppavvaad assapssssm ggacssftts ssptiystsv tdskamqves
       61 csaavgvstr gvseqqitsn taqqhpatpk rhtvlyispp pedlldnsrm scqdegcgle
      121 seqscsmwme dspsnfsnms tssyndntev prksrkrnpk qrpgikrrdc eesnmdifda
      181 dsakaphyvl sqlstdsksn skagngasen qkgaggkktp mlcgqyptks egkelkimvq
      241 petqhraryl tegsrgsvkd rtqqgfptvk leghnepvvl qvfvgndsgr vkphgfyqac
      301 rvtgrnttpc kevdiegttv ievgldpsnn mtlavdcvgi lklrnadvea rigiagskkk
      361 strarlvfrv nitrkdgstl tlqtpsspil ctqpagvpei lkkslhscsv kgeeevflig
      421 knflkgtkvi fqenvsdens wkaeaeidme lfhqnhlivk vppyhdqqit savsvgiyvv
      481 tnagrshdvq pftytpepag tlnvnvkkei sspaqhcsfe eaikavkatg cnlekvnilp
      541 salitplmps smiknedvap measnvvgpt qqtlensmsg istsashlps esenqqqiqp
      601 kvynpetlst iqtqdisqpg sfsavstpgq lqnsdallqq aaqfqtrdsq prevlqsdgt
      661 vvtlsqltda sqqqqptlse paqalqqqis ssifssasgv sqlqntiqql qagnfptnta
      721 tgssrnvdlv qqvleaqqql ssvlfsgsds sedvqdqlna difqqvsqiq nsvnpgmfss
      781 sdtavhsrpe nllpgraesv rsqpegalsn qqqqqqqqam etsaamvmgm qqnmcqaatq
      841 mqsdlfssst agngalqqsp vyqqashmmg glsssedmqm qcelfssspg vsggeaaapa
      901 qqpvssngaa mfqpsssaeg eeasgqskqm qssvfqtmvq mqhsgesqsq vnlfsstktm
      961 msvqasgtqq qggglfqqgg emmsiqsgsf iqqsphsqaq lfhsqnpigd tqnisqetqg
     1021 slfhssnsiv hnqtntnssd qlqppmfhsq namgvlqsss vpqdqqsanm flsqssmsnp
     1081 atqeeqmsff tspnpisplq tatnteqqts fqqqtqishi qssmlpqeqp qtqpaqqglf
     1141 qsqvslgsmq sssipqnqqg aifqpqhsiv aiqssppsqe qqqqqqqnmm fsnqnamstm
     1201 apqkqnmifn pnqnpvtnqe qqgqsifhpq snmasmnqeq qpmqfqsqtt vsslqnpgss
     1261 qaeaqqptif hnspqiqlvq gspssqeqqv tlfissasms alqnsmsqpe lqqspmyssq
     1321 nsmagmpgta sppqqqaplf hstaggainq lqnspassqq tsgiflfgiq nncgqllpag
     1381 paalpeelma mgqpgqpqge aqpavpalls qqlpetpplp samaanqnme kiddllvslq
     1441 nqgnnmagsf
//
LOCUS       XP_041340006            1449 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear factor of activated T-cells 5 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340006
VERSION     XP_041340006.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484072.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1449
                     /product="nuclear factor of activated T-cells 5 isoform
                     X2"
                     /calculated_mol_wt=155281
     Region          233..393
                     /region_name="RHD-n_TonEBP"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD) of tonicity-responsive enhancer binding protein
                     (TonEBP); cd07882"
                     /db_xref="CDD:143642"
     Site            order(246,249,251..256,342,344..345,360,362,393)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143642"
     Region          397..496
                     /region_name="IPT_NFAT"
                     /note="IPT domain of the NFAT family of transcription
                     factors. NFAT transcription complexes are a target of
                     calcineurin, a calcium dependent phosphatase, and activate
                     genes mainly involved in cell-cell-interaction; cd01178"
                     /db_xref="CDD:238583"
     Site            order(421,484)
                     /site_type="DNA binding"
                     /note="DNA binding sites [nucleotide binding]"
                     /db_xref="CDD:238583"
     Region          1224..>1421
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1449
                     /gene="NFAT5"
                     /coded_by="XM_041484072.1:64..4413"
                     /db_xref="GeneID:121362490"
ORIGIN      
        1 msqtsggeag spppavvaad assapssssm ggacssftts ssptiystsv tdskamqves
       61 csaavgvstr gvseqqitsn taqqhpatpk rhtvlyispp pedlldnsrm scqdegcgle
      121 seqscsmwme dspsnfsnms tssyndntev prksrkrnpk qrpgikrrdc eesnmdifda
      181 dsakaphyvl sqlstdsksn skagngasen qkgaggkktp mlcgqyptks egkelkimvq
      241 petqhraryl tegsrgsvkd rtqqgfptvk leghnepvvl qvfvgndsgr vkphgfyqac
      301 rvtgrnttpc kevdiegttv ievgldpsnn mtlavdcvgi lklrnadvea rigiagskkk
      361 strarlvfrv nitrkdgstl tlqtpsspil ctqpagvpei lkkslhscsv kgeeevflig
      421 knflkgtkvi fqenvsdens wkaeaeidme lfhqnhlivk vppyhdqqit savsvgiyvv
      481 tnagrshdvq pftytpepag tlnvnvkkei sspaqhcsfe eaikvkatgc nlekvnilps
      541 alitplmpss miknedvapm easnvvgptq qtlensmsgi stsashlpse senqqqiqpk
      601 vynpetlsti qtqdisqpgs fsavstpgql qnsdallqqa aqfqtrdsqp revlqsdgtv
      661 vtlsqltdas qqqqptlsep aqalqqqiss sifssasgvs qlqntiqqlq agnfptntat
      721 gssrnvdlvq qvleaqqqls svlfsgsdss edvqdqlnad ifqqvsqiqn svnpgmfsss
      781 dtavhsrpen llpgraesvr sqpegalsnq qqqqqqqame tsaamvmgmq qnmcqaatqm
      841 qsdlfsssta gngalqqspv yqqashmmgg lsssedmqmq celfssspgv sggeaaapaq
      901 qpvssngaam fqpsssaege easgqskqmq ssvfqtmvqm qhsgesqsqv nlfsstktmm
      961 svqasgtqqq ggglfqqgge mmsiqsgsfi qqsphsqaql fhsqnpigdt qnisqetqgs
     1021 lfhssnsivh nqtntnssdq lqppmfhsqn amgvlqsssv pqdqqsanmf lsqssmsnpa
     1081 tqeeqmsfft spnpisplqt atnteqqtsf qqqtqishiq ssmlpqeqpq tqpaqqglfq
     1141 sqvslgsmqs ssipqnqqga ifqpqhsiva iqssppsqeq qqqqqqnmmf snqnamstma
     1201 pqkqnmifnp nqnpvtnqeq qgqsifhpqs nmasmnqeqq pmqfqsqttv sslqnpgssq
     1261 aeaqqptifh nspqiqlvqg spssqeqqvt lfissasmsa lqnsmsqpel qqspmyssqn
     1321 smagmpgtas ppqqqaplfh staggainql qnspassqqt sgiflfgiqn ncgqllpagp
     1381 aalpeelmam gqpgqpqgea qpavpallsq qlpetpplps amaanqnmek iddllvslqn
     1441 qgnnmagsf
//
LOCUS       XP_041340008            1421 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear factor of activated T-cells 5 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340008
VERSION     XP_041340008.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484074.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1421
                     /product="nuclear factor of activated T-cells 5 isoform
                     X3"
                     /calculated_mol_wt=152780
     Region          204..364
                     /region_name="RHD-n_TonEBP"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD) of tonicity-responsive enhancer binding protein
                     (TonEBP); cd07882"
                     /db_xref="CDD:143642"
     Site            order(217,220,222..227,313,315..316,331,333,364)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143642"
     Region          368..467
                     /region_name="IPT_NFAT"
                     /note="IPT domain of the NFAT family of transcription
                     factors. NFAT transcription complexes are a target of
                     calcineurin, a calcium dependent phosphatase, and activate
                     genes mainly involved in cell-cell-interaction; cd01178"
                     /db_xref="CDD:238583"
     Site            order(392,455)
                     /site_type="DNA binding"
                     /note="DNA binding sites [nucleotide binding]"
                     /db_xref="CDD:238583"
     Region          1196..>1393
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1421
                     /gene="NFAT5"
                     /coded_by="XM_041484074.1:213..4478"
                     /db_xref="GeneID:121362490"
ORIGIN      
        1 mggacssftt sssptiysts vtdskamqve scsaavgvst rgvseqqits ntaqqhpatp
       61 krhtvlyisp ppedlldnsr mscqdegcgl eseqscsmwm edspsnfsnm stssyndnte
      121 vprksrkrnp kqrpgikrrd ceesnmdifd adsakaphyv lsqlstdsks nskagngase
      181 nqkgaggkkt pmlcgqyptk segkelkimv qpetqhrary ltegsrgsvk drtqqgfptv
      241 kleghnepvv lqvfvgndsg rvkphgfyqa crvtgrnttp ckevdiegtt vievgldpsn
      301 nmtlavdcvg ilklrnadve arigiagskk kstrarlvfr vnitrkdgst ltlqtpsspi
      361 lctqpagvpe ilkkslhscs vkgeeevfli gknflkgtkv ifqenvsden swkaeaeidm
      421 elfhqnhliv kvppyhdqqi tsavsvgiyv vtnagrshdv qpftytpepa gtlnvnvkke
      481 isspaqhcsf eeaikavkat gcnlekvnil psalitplmp ssmiknedva pmeasnvvgp
      541 tqqtlensms gistsashlp sesenqqqiq pkvynpetls tiqtqdisqp gsfsavstpg
      601 qlqnsdallq qaaqfqtrds qprevlqsdg tvvtlsqltd asqqqqptls epaqalqqqi
      661 sssifssasg vsqlqntiqq lqagnfptnt atgssrnvdl vqqvleaqqq lssvlfsgsd
      721 ssedvqdqln adifqqvsqi qnsvnpgmfs ssdtavhsrp enllpgraes vrsqpegals
      781 nqqqqqqqqa metsaamvmg mqqnmcqaat qmqsdlfsss tagngalqqs pvyqqashmm
      841 gglsssedmq mqcelfsssp gvsggeaaap aqqpvssnga amfqpsssae geeasgqskq
      901 mqssvfqtmv qmqhsgesqs qvnlfsstkt mmsvqasgtq qqggglfqqg gemmsiqsgs
      961 fiqqsphsqa qlfhsqnpig dtqnisqetq gslfhssnsi vhnqtntnss dqlqppmfhs
     1021 qnamgvlqss svpqdqqsan mflsqssmsn patqeeqmsf ftspnpispl qtatnteqqt
     1081 sfqqqtqish iqssmlpqeq pqtqpaqqgl fqsqvslgsm qsssipqnqq gaifqpqhsi
     1141 vaiqssppsq eqqqqqqqnm mfsnqnamst mapqkqnmif npnqnpvtnq eqqgqsifhp
     1201 qsnmasmnqe qqpmqfqsqt tvsslqnpgs sqaeaqqpti fhnspqiqlv qgspssqeqq
     1261 vtlfissasm salqnsmsqp elqqspmyss qnsmagmpgt asppqqqapl fhstaggain
     1321 qlqnspassq qtsgiflfgi qnncgqllpa gpaalpeelm amgqpgqpqg eaqpavpall
     1381 sqqlpetppl psamaanqnm ekiddllvsl qnqgnnmags f
//
LOCUS       XP_041340015            1230 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear factor of activated T-cells 5 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340015
VERSION     XP_041340015.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484081.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1230
                     /product="nuclear factor of activated T-cells 5 isoform
                     X4"
                     /calculated_mol_wt=132267
     Region          13..173
                     /region_name="RHD-n_TonEBP"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD) of tonicity-responsive enhancer binding protein
                     (TonEBP); cd07882"
                     /db_xref="CDD:143642"
     Site            order(26,29,31..36,122,124..125,140,142,173)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143642"
     Region          177..276
                     /region_name="IPT_NFAT"
                     /note="IPT domain of the NFAT family of transcription
                     factors. NFAT transcription complexes are a target of
                     calcineurin, a calcium dependent phosphatase, and activate
                     genes mainly involved in cell-cell-interaction; cd01178"
                     /db_xref="CDD:238583"
     Site            order(201,264)
                     /site_type="DNA binding"
                     /note="DNA binding sites [nucleotide binding]"
                     /db_xref="CDD:238583"
     Region          1005..>1202
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1230
                     /gene="NFAT5"
                     /coded_by="XM_041484081.1:249..3941"
                     /db_xref="GeneID:121362490"
ORIGIN      
        1 mlcgqyptks egkelkimvq petqhraryl tegsrgsvkd rtqqgfptvk leghnepvvl
       61 qvfvgndsgr vkphgfyqac rvtgrnttpc kevdiegttv ievgldpsnn mtlavdcvgi
      121 lklrnadvea rigiagskkk strarlvfrv nitrkdgstl tlqtpsspil ctqpagvpei
      181 lkkslhscsv kgeeevflig knflkgtkvi fqenvsdens wkaeaeidme lfhqnhlivk
      241 vppyhdqqit savsvgiyvv tnagrshdvq pftytpepag tlnvnvkkei sspaqhcsfe
      301 eaikavkatg cnlekvnilp salitplmps smiknedvap measnvvgpt qqtlensmsg
      361 istsashlps esenqqqiqp kvynpetlst iqtqdisqpg sfsavstpgq lqnsdallqq
      421 aaqfqtrdsq prevlqsdgt vvtlsqltda sqqqqptlse paqalqqqis ssifssasgv
      481 sqlqntiqql qagnfptnta tgssrnvdlv qqvleaqqql ssvlfsgsds sedvqdqlna
      541 difqqvsqiq nsvnpgmfss sdtavhsrpe nllpgraesv rsqpegalsn qqqqqqqqam
      601 etsaamvmgm qqnmcqaatq mqsdlfssst agngalqqsp vyqqashmmg glsssedmqm
      661 qcelfssspg vsggeaaapa qqpvssngaa mfqpsssaeg eeasgqskqm qssvfqtmvq
      721 mqhsgesqsq vnlfsstktm msvqasgtqq qggglfqqgg emmsiqsgsf iqqsphsqaq
      781 lfhsqnpigd tqnisqetqg slfhssnsiv hnqtntnssd qlqppmfhsq namgvlqsss
      841 vpqdqqsanm flsqssmsnp atqeeqmsff tspnpisplq tatnteqqts fqqqtqishi
      901 qssmlpqeqp qtqpaqqglf qsqvslgsmq sssipqnqqg aifqpqhsiv aiqssppsqe
      961 qqqqqqqnmm fsnqnamstm apqkqnmifn pnqnpvtnqe qqgqsifhpq snmasmnqeq
     1021 qpmqfqsqtt vsslqnpgss qaeaqqptif hnspqiqlvq gspssqeqqv tlfissasms
     1081 alqnsmsqpe lqqspmyssq nsmagmpgta sppqqqaplf hstaggainq lqnspassqq
     1141 tsgiflfgiq nncgqllpag paalpeelma mgqpgqpqge aqpavpalls qqlpetpplp
     1201 samaanqnme kiddllvslq nqgnnmagsf
//
LOCUS       XP_041340025             905 aa            linear   VRT 06-MAY-2021
DEFINITION  NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340025
VERSION     XP_041340025.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484091.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..905
                     /product="NEDD4-like E3 ubiquitin-protein ligase WWP2
                     isoform X1"
                     /calculated_mol_wt=101260
     Region          17..141
                     /region_name="C2_E3_ubiquitin_ligase"
                     /note="C2 domain present in E3 ubiquitin ligase; cd04021"
                     /db_xref="CDD:175988"
     Region          <143..>335
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          335..364
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          <364..905
                     /region_name="HUL4"
                     /note="Ubiquitin-protein ligase [Posttranslational
                     modification, protein turnover, chaperones]; COG5021"
                     /db_xref="CDD:227354"
     CDS             1..905
                     /gene="WWP2"
                     /coded_by="XM_041484091.1:110..2827"
                     /db_xref="GeneID:121362520"
ORIGIN      
        1 maaasssrar agppcekspl svkvvsvkpk aqsrparmnc yvevagdglp setkktgkqm
       61 gvsellwnei ltlnvtaqsh lelkvwicht lrnellgaas lslgsllkgg gklenrqltl
      121 dlqtenkgsi vsggeltifl dgpavalgsv pdgsagtegs qvpgrdpsst avategrhqp
      181 pstncfgsrp rthrhaagaa rgntgsgeqs psgrsrhrqq akssqhtsta tsmangvats
      241 mangtatsta ngtatsmang vangtvngda vaavdmdedr paagasvptp aasgtaegss
      301 apappalggs reaeeaasgp sapparaavl aldalppgwe qrelpngrvy yvdhnnkttt
      361 werplppgwe krvdprgryy yvdhntrttt wqrptaeyvr nyeqwqsqrn qlqgamqqfs
      421 qrflyqssga psdndplgpl ppgwekrqdn grvyyvnhnt rttqwedprt qgrmiqeppl
      481 ppgwemkytn esvryfvdhn trtttfkdpr pgfesgskhg gspgaydrsf rwkyhqfrfl
      541 chsnalpshv kisvsrqtlf edsfqqimnm kpydlrrrly iimrgeegld yggiarewff
      601 llshevlnpm yclfeyagkn nyclqinpas sinpdhltyf rfigrfiama lyhgkfidtg
      661 ftlpfykrml nkrptlkdle sidpefynsi vwtkenslee cglelyfiqd meilgkvtth
      721 elkeggesir vteenkeeyi mlltdwrftr gveeqtkafl dgfnevvple wlryfdekel
      781 elmlcgmqei dmndwqknti yrhytknskq iqwfwqvvke mdnekrirll qfvtgtcrlp
      841 vggfaeligs ngpqkfcidk vgketwlprs htcfnrldlp pyksyeqlke kllyaieete
      901 gfgqe
//
LOCUS       XP_041340033             904 aa            linear   VRT 06-MAY-2021
DEFINITION  NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340033
VERSION     XP_041340033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..904
                     /product="NEDD4-like E3 ubiquitin-protein ligase WWP2
                     isoform X2"
                     /calculated_mol_wt=101104
     Region          17..141
                     /region_name="C2_E3_ubiquitin_ligase"
                     /note="C2 domain present in E3 ubiquitin ligase; cd04021"
                     /db_xref="CDD:175988"
     Region          <143..>335
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          335..364
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          365..394
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          440..468
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          480..510
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(494,505)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          550..902
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(555,585,596,657,831,866..867,870..874,894,901)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(685,688..689,691..692,695,702,704,707..708,710,716,
                     721,738,742)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..904
                     /gene="WWP2"
                     /coded_by="XM_041484099.1:110..2824"
                     /db_xref="GeneID:121362520"
ORIGIN      
        1 maaasssrar agppcekspl svkvvsvkpk aqsrparmnc yvevagdglp setkktgkqm
       61 gvsellwnei ltlnvtaqsh lelkvwicht lrnellgaas lslgsllkgg gklenrqltl
      121 dlqtenkgsi vsggeltifl dgpavalgsv pdgsagtegs qvpgrdpsst avategrhqp
      181 pstncfgsrp rthrhaagaa rgntgsgeqs psgrsrhrqq akssqhtsta tsmangvats
      241 mangtatsta ngtatsmang vangtvngda vaavdmdedr paagasvptp aasgtaegss
      301 apappalggs reaeeaasgp sapparaavl aldalppgwe qrelpngrvy yvdhnnkttt
      361 werplppgwe krvdprgryy yvdhntrttt wqrptaeyvr nyeqwqsqrn qlqgamqqfs
      421 qrflyqssga psdndplgpl ppgwekrqdn grvyyvnhnt rttqwedprt qgmiqepplp
      481 pgwemkytne svryfvdhnt rtttfkdprp gfesgskhgg spgaydrsfr wkyhqfrflc
      541 hsnalpshvk isvsrqtlfe dsfqqimnmk pydlrrrlyi imrgeegldy ggiarewffl
      601 lshevlnpmy clfeyagknn yclqinpass inpdhltyfr figrfiamal yhgkfidtgf
      661 tlpfykrmln krptlkdles idpefynsiv wtkensleec glelyfiqdm eilgkvtthe
      721 lkeggesirv teenkeeyim lltdwrftrg veeqtkafld gfnevvplew lryfdekele
      781 lmlcgmqeid mndwqkntiy rhytknskqi qwfwqvvkem dnekrirllq fvtgtcrlpv
      841 ggfaeligsn gpqkfcidkv gketwlprsh tcfnrldlpp yksyeqlkek llyaieeteg
      901 fgqe
//
LOCUS       XP_041340043             758 aa            linear   VRT 06-MAY-2021
DEFINITION  NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340043
VERSION     XP_041340043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="NEDD4-like E3 ubiquitin-protein ligase WWP2
                     isoform X3"
                     /calculated_mol_wt=87338
     Region          17..141
                     /region_name="C2_E3_ubiquitin_ligase"
                     /note="C2 domain present in E3 ubiquitin ligase; cd04021"
                     /db_xref="CDD:175988"
     Region          192..217
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(203,214)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          218..247
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          293..321
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          334..364
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(348,359)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          404..756
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(409,439,450,511,685,720..721,724..728,748,755)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(539,542..543,545..546,549,556,558,561..562,564,570,
                     575,592,596)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..758
                     /gene="WWP2"
                     /coded_by="XM_041484109.1:110..2386"
                     /db_xref="GeneID:121362520"
ORIGIN      
        1 maaasssrar agppcekspl svkvvsvkpk aqsrparmnc yvevagdglp setkktgkqm
       61 gvsellwnei ltlnvtaqsh lelkvwicht lrnellgaas lslgsllkgg gklenrqltl
      121 dlqtenkgsi vsggeltifl dgpavalgsv pdgsagtegs qvpgrdpsst avategrhqp
      181 pstncfgsrp rweqrelpng rvyyvdhnnk tttwerplpp gwekrvdprg ryyyvdhntr
      241 tttwqrptae yvrnyeqwqs qrnqlqgamq qfsqrflyqs sgapsdndpl gplppgwekr
      301 qdngrvyyvn hntrttqwed prtqgrmiqe pplppgwemk ytnesvryfv dhntrtttfk
      361 dprpgfesgs khggspgayd rsfrwkyhqf rflchsnalp shvkisvsrq tlfedsfqqi
      421 mnmkpydlrr rlyiimrgee gldyggiare wffllshevl npmyclfeya gknnyclqin
      481 passinpdhl tyfrfigrfi amalyhgkfi dtgftlpfyk rmlnkrptlk dlesidpefy
      541 nsivwtkens leecglelyf iqdmeilgkv tthelkegge sirvteenke eyimlltdwr
      601 ftrgveeqtk afldgfnevv plewlryfde kelelmlcgm qeidmndwqk ntiyrhytkn
      661 skqiqwfwqv vkemdnekri rllqfvtgtc rlpvggfael igsngpqkfc idkvgketwl
      721 prshtcfnrl dlppyksyeq lkekllyaie etegfgqe
//
LOCUS       XP_041340054             426 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein NOB1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340054
VERSION     XP_041340054.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484120.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="RNA-binding protein NOB1"
                     /calculated_mol_wt=46631
     Region          12..98
                     /region_name="PIN_6"
                     /note="PIN domain of ribonuclease; pfam17146"
                     /db_xref="CDD:465362"
     Region          162..225
                     /region_name="WRNPLPNID"
                     /note="Putative WW-binding domain and destruction box;
                     pfam15017"
                     /db_xref="CDD:464448"
     Region          274..346
                     /region_name="NOB1_Zn_bind"
                     /note="Nin one binding (NOB1) Zn-ribbon like; pfam08772"
                     /db_xref="CDD:462597"
     CDS             1..426
                     /gene="NOB1"
                     /coded_by="XM_041484120.1:86..1366"
                     /db_xref="GeneID:121362535"
ORIGIN      
        1 mghadmarvp hvvadtgafl saaplqdiad alytvpevla eirdrparrr laalpcelrl
       61 rrprpellrl vtefskktgd ypslsaadlq vlaltcqlqa didgpgcvrw epqdkvrlss
      121 tprhpeaplh lagfhlpakh kpagkgppqp gpgsgpapae sdqfgsflyw rpplpsieee
      181 lrellaiags peppeehrss adgasageee eedeesddeg witpsnlkqa qqdtghcdta
      241 pvgvqvgcvt tdfamqnvll qmglhvlavn gmlirrarsy ilrchgcfrt tsdmtkvfcp
      301 hcgnktlkkv avsvsddgsl hmhfsrnpkv lnprglrypl papqggkhan nphlvedqrf
      361 pqqrlsrkar qktnvfdpdy lagaspfaen dvhsraahlh lrdaalgagr rrlnpnavtk
      421 kfvkrr
//
LOCUS       XP_041340067             322 aa            linear   VRT 06-MAY-2021
DEFINITION  26S proteasome non-ATPase regulatory subunit 7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340067
VERSION     XP_041340067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..322
                     /product="26S proteasome non-ATPase regulatory subunit 7"
                     /calculated_mol_wt=36714
     Region          7..285
                     /region_name="MPN_RPN7_8"
                     /note="Mpr1p, Pad1p N-terminal (MPN) domains without
                     catalytic isopeptidase activity, found in 19S proteasomal
                     subunits Rpn7 and Rpn8; cd08062"
                     /db_xref="CDD:163693"
     CDS             1..322
                     /gene="PSMD7"
                     /coded_by="XM_041484133.1:99..1067"
                     /db_xref="GeneID:121362540"
ORIGIN      
        1 mpelavdrvv vhplvllsvv dhfnrigkvg nqkrvvgvll gswqkkildv snsfavpfde
       61 ddkddtvwfl dhdylenmyg mfkkvnarer ivgwyhtgpk lhkndiaine lmkrycpnsv
      121 lviidvkpkd lglpteayis veevhddgtp tsktfehvts eigaeeaeev gvehllrdik
      181 dttvgtlsqr itnqvhglkg lnsklldirs ylekvalgkl pinhqiiyhl qdvfnllpdv
      241 nlqefvkafy lktndqmvvv ylaslirsvv alhnlinnki anrdaekkeg qekeeskker
      301 kdekekdkek sdgkkeekke kk
//
LOCUS       XP_041340076             622 aa            linear   VRT 06-MAY-2021
DEFINITION  malonate--CoA ligase ACSF3, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340076
VERSION     XP_041340076.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484142.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..622
                     /product="malonate--CoA ligase ACSF3, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=69026
     Region          73..617
                     /region_name="MCS"
                     /note="Malonyl-CoA synthetase (MCS); cd05941"
                     /db_xref="CDD:341264"
     Site            order(221,224..229,231..232)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341264"
     Site            order(224,264..265,268..270,315,317,321,354..356,375..380,
                     384,399,503,514,522,524,526,529,558,594)
                     /site_type="active"
                     /db_xref="CDD:341264"
     Site            order(224,354..356,375..380,399,503,514,522,524,529)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341264"
     Site            order(264..265,268..270,315,317,321,354,376,378..380,384,
                     524,526..528,558,594)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341264"
     CDS             1..622
                     /gene="ACSF3"
                     /coded_by="XM_041484142.1:208..2076"
                     /db_xref="GeneID:121362548"
ORIGIN      
        1 mcqslqrgra grmllpllfp qlcrplrcll rdlsrctrdg rragcphral htawatcssd
       61 itpvftrala fgdkvaivdq ngehtyrell srslrlsqei crllqcpsrd lkeerisflc
      121 pndasyvvaq waswmsgaia vplyrkhplp eleyviqdsq salliaadef lgkitpsaqk
      181 vgvpvlplpr pgggggstsp aateegplps csswkdrgam iiytsgttgr pkgvlsthen
      241 vqavttglve kwewkkedvi lhvlplhhvh gvinkllcpl wvgatcvmfp efsahavwkk
      301 llssqaprvn vfmavptiya klmeyydehf tqpqvqdfvr afcqenirlm vsgsaalpvp
      361 vlekwksitg htllerygmt eigmalsnpl hgarvpgsvg tplpgvavri asetlrdgar
      421 cytihaqgde nctqvlipsa lehqkhldep fhlrrevlqv tpglegqege llvkgpsvfr
      481 eywnrpketa daftadgwfr tgdtaaykdg vywikgrtsv diiknggfkv saleverqll
      541 ahphitdvav igppdavwgq rvsavvrlrr gemlsvrdlk dwardtmapy aiptelivve
      601 eiprnqmgkv nkkellkrfy pa
//
LOCUS       XP_041340084             597 aa            linear   VRT 06-MAY-2021
DEFINITION  malonate--CoA ligase ACSF3, mitochondrial isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340084
VERSION     XP_041340084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484150.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..597
                     /product="malonate--CoA ligase ACSF3, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=66039
     Region          73..592
                     /region_name="MCS"
                     /note="Malonyl-CoA synthetase (MCS); cd05941"
                     /db_xref="CDD:341264"
     Site            order(221,224..229,231..232)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341264"
     Site            order(224,264..265,268..270,315,317,321,354..356,375..380,
                     384,399,478,489,497,499,501,504,533,569)
                     /site_type="active"
                     /db_xref="CDD:341264"
     Site            order(224,354..356,375..380,399,478,489,497,499,504)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341264"
     Site            order(264..265,268..270,315,317,321,354,376,378..380,384,
                     499,501..503,533,569)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341264"
     CDS             1..597
                     /gene="ACSF3"
                     /coded_by="XM_041484150.1:207..2000"
                     /db_xref="GeneID:121362548"
ORIGIN      
        1 mcqslqrgra grmllpllfp qlcrplrcll rdlsrctrdg rragcphral htawatcssd
       61 itpvftrala fgdkvaivdq ngehtyrell srslrlsqei crllqcpsrd lkeerisflc
      121 pndasyvvaq waswmsgaia vplyrkhplp eleyviqdsq salliaadef lgkitpsaqk
      181 vgvpvlplpr pgggggstsp aateegplps csswkdrgam iiytsgttgr pkgvlsthen
      241 vqavttglve kwewkkedvi lhvlplhhvh gvinkllcpl wvgatcvmfp efsahavwkk
      301 llssqaprvn vfmavptiya klmeyydehf tqpqvqdfvr afcqenirlm vsgsaalpvp
      361 vlekwksitg htllerygmt eigmalsnpl hgarvpgsvg tplpgvavri asetlrdgar
      421 cytihaqgde nctqvtpgle gqegellvkg psvfreywnr pketadafta dgwfrtgdta
      481 aykdgvywik grtsvdiikn ggfkvsalev erqllahphi tdvavigppd avwgqrvsav
      541 vrlrrgemls vrdlkdward tmapyaipte livveeiprn qmgkvnkkel lkrfypa
//
LOCUS       XP_041340097             477 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein regulatory complex subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041340097
VERSION     XP_041340097.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484163.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="dynein regulatory complex subunit 4"
                     /calculated_mol_wt=55489
     Region          <23..>390
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          220..419
                     /region_name="GAS"
                     /note="Growth-arrest specific micro-tubule binding;
                     pfam13851"
                     /db_xref="CDD:464001"
     CDS             1..477
                     /gene="GAS8"
                     /coded_by="XM_041484163.1:482..1915"
                     /db_xref="GeneID:121362559"
ORIGIN      
        1 mapkkkagkg skgpavvdal apedmsreql lqhvvhlree ldrerqerns fqlecnriqs
       61 yweitrgele erkaelrgrd rqmeeaeerh qleikvykqk vkhllheqqe sltelkaegv
      121 lslkraqkdh weqeqemwke krslnirlne qelaneaait nlclkheeem arlrsdfelq
      181 tkemeakytr kmqalrdeld lrrkteihel eerkntqine lmgnhegafg aiknyyndit
      241 aknltlinll keqvedlkkk eavlekekad vlrenkeltq plqeaqelva elqrklvnyy
      301 kdketlmnsk ahlkitqkel kdlqwehevl eqrfskvqee rddlyqnftr ainevqqktg
      361 fknlllerkl hgllslleqk evelgevaat snldpsalsl vshkledmln sknatiqdlq
      421 lqlarvckah ndmlqtfeak ltafgipldn lgfqplsfpf pgqelgqgpa glvsvpt
//
LOCUS       XP_041340106             595 aa            linear   VRT 06-MAY-2021
DEFINITION  lysine--tRNA ligase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340106
VERSION     XP_041340106.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484172.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..595
                     /product="lysine--tRNA ligase isoform X1"
                     /calculated_mol_wt=68345
     Region          30..582
                     /region_name="PLN02502"
                     /note="lysyl-tRNA synthetase"
                     /db_xref="CDD:215278"
     Site            274..278
                     /site_type="other"
                     /note="motif 1"
                     /db_xref="CDD:238398"
     Site            order(306,328,330,336,340,492,499,502,506,558)
                     /site_type="active"
                     /db_xref="CDD:238398"
     Site            327..330
                     /site_type="other"
                     /note="motif 2"
                     /db_xref="CDD:238398"
     Site            555..558
                     /site_type="other"
                     /note="motif 3"
                     /db_xref="CDD:238398"
     CDS             1..595
                     /gene="KARS1"
                     /coded_by="XM_041484172.1:82..1869"
                     /db_xref="GeneID:121362568"
ORIGIN      
        1 mlssgaarlr swvwraapal rrqqalhdqs selkrrlkae rktaekeakq keqsekhsnk
       61 psltsednva tdeesldpnq yykirshavq qlkgssedpy phkfhvdlsl sdfiekynhl
      121 qpgdhltnit lrvagrihak raaggklify dlrgegvklq vmansslyks eeeyfrvnsk
      181 lrrgdiigve gnpgktrkge lsiipyeitl lspclhmlph lhfglkdket ryrqryldli
      241 lndyvrqkfi trakiitylr sfldelgfle vetpmmnvip ggavakpfit yhneldmnly
      301 mriapelyhk mlvvggldrv yeigrqfrne gidlthnpef ttcefymaya dyhdlmeite
      361 kllsgmvkhi tggykityhp dgqdgqayei dftppfrris mvydlekvlg vkfpstecfe
      421 teetrrffdn lcvernvecp pprttarlld klvgeflevt cinptficdh pqvmsplakw
      481 hrslpglter felfvmkkev cnaytelndp frqrqlfedq akakaagdde amfidenfct
      541 aleyglppta gwgmgidrlt mfltdsnnik evllfpamkp edskkeaqpv egtsv
//
LOCUS       XP_041340114             584 aa            linear   VRT 06-MAY-2021
DEFINITION  lysine--tRNA ligase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340114
VERSION     XP_041340114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..584
                     /product="lysine--tRNA ligase isoform X2"
                     /calculated_mol_wt=66955
     Region          17..571
                     /region_name="PLN02502"
                     /note="lysyl-tRNA synthetase"
                     /db_xref="CDD:215278"
     Site            263..267
                     /site_type="other"
                     /note="motif 1"
                     /db_xref="CDD:238398"
     Site            order(295,317,319,325,329,481,488,491,495,547)
                     /site_type="active"
                     /db_xref="CDD:238398"
     Site            316..319
                     /site_type="other"
                     /note="motif 2"
                     /db_xref="CDD:238398"
     Site            544..547
                     /site_type="other"
                     /note="motif 3"
                     /db_xref="CDD:238398"
     CDS             1..584
                     /gene="KARS1"
                     /coded_by="XM_041484180.1:71..1825"
                     /db_xref="GeneID:121362568"
ORIGIN      
        1 maaaarecna aeieshlskn elkrrlkaer ktaekeakqk eqsekhsnkp sltsednvat
       61 deesldpnqy ykirshavqq lkgssedpyp hkfhvdlsls dfiekynhlq pgdhltnitl
      121 rvagrihakr aaggklifyd lrgegvklqv mansslykse eeyfrvnskl rrgdiigveg
      181 npgktrkgel siipyeitll spclhmlphl hfglkdketr yrqryldlil ndyvrqkfit
      241 rakiitylrs fldelgflev etpmmnvipg gavakpfity hneldmnlym riapelyhkm
      301 lvvggldrvy eigrqfrneg idlthnpeft tcefymayad yhdlmeitek llsgmvkhit
      361 ggykityhpd gqdgqayeid ftppfrrism vydlekvlgv kfpstecfet eetrrffdnl
      421 cvernvecpp prttarlldk lvgeflevtc inptficdhp qvmsplakwh rslpglterf
      481 elfvmkkevc naytelndpf rqrqlfedqa kakaagddea mfidenfcta leyglpptag
      541 wgmgidrltm fltdsnnike vllfpamkpe dskkeaqpve gtsv
//
LOCUS       XP_041340129             525 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-specific adenosine deaminase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340129
VERSION     XP_041340129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484195.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..525
                     /product="tRNA-specific adenosine deaminase 1 isoform X1"
                     /calculated_mol_wt=58492
     Region          87..517
                     /region_name="A_deamin"
                     /note="Adenosine-deaminase (editase) domain; pfam02137"
                     /db_xref="CDD:460458"
     CDS             1..525
                     /gene="ADAT1"
                     /coded_by="XM_041484195.1:72..1649"
                     /db_xref="GeneID:121362577"
ORIGIN      
        1 mspavlarss gagvpqepal esramwsade iaglcylhyr trlpkqgkpd pnrewtsvaa
       61 vvkvesaaqr galdspenlq vtkevvamgt gtkcigqnkm rktgdilnds haeivakrsf
      121 qryllhqlwl aasdqqcifs pgtengkwkl kpniififfs shtpcgdasi fpisepenqf
      181 skpvteghea gqsaecrsnh nhlcpedkrk teemarnyim krmktddggc fsvitedlai
      241 qhesvkredn gnqkscecsa evqtanketg lvrskvvdvh rtgakcvpge lddaripglg
      301 yhcvgllrvk pgrgdrtcsm scsdklarwn vlgcqgallm hflqypvyls aivvgkcpys
      361 qeamrravie rcqrisslpd gfvtqevell qsdlqfehsr qaiqelqsns ktklvpcsaa
      421 iswsavpeqp ldvtsdgfrq gttkkaigsh qsrskickve lfhkfqklvt sisqedlpdt
      481 lrmktlktyw dykeaalnyq eawrvlrsqa llgwvknake ylhft
//
LOCUS       XP_041340138             501 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-specific adenosine deaminase 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340138
VERSION     XP_041340138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484204.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="tRNA-specific adenosine deaminase 1 isoform X2"
                     /calculated_mol_wt=56128
     Region          63..493
                     /region_name="A_deamin"
                     /note="Adenosine-deaminase (editase) domain; pfam02137"
                     /db_xref="CDD:460458"
     CDS             1..501
                     /gene="ADAT1"
                     /coded_by="XM_041484204.1:266..1771"
                     /db_xref="GeneID:121362577"
ORIGIN      
        1 mwsadeiagl cylhyrtrlp kqgkpdpnre wtsvaavvkv esaaqrgald spenlqvtke
       61 vvamgtgtkc igqnkmrktg dilndshaei vakrsfqryl lhqlwlaasd qqcifspgte
      121 ngkwklkpni ififfsshtp cgdasifpis epenqfskpv tegheagqsa ecrsnhnhlc
      181 pedkrkteem arnyimkrmk tddggcfsvi tedlaiqhes vkredngnqk scecsaevqt
      241 anketglvrs kvvdvhrtga kcvpgeldda ripglgyhcv gllrvkpgrg drtcsmscsd
      301 klarwnvlgc qgallmhflq ypvylsaivv gkcpysqeam rraviercqr isslpdgfvt
      361 qevellqsdl qfehsrqaiq elqsnsktkl vpcsaaisws avpeqpldvt sdgfrqgttk
      421 kaigshqsrs kickvelfhk fqklvtsisq edlpdtlrmk tlktywdyke aalnyqeawr
      481 vlrsqallgw vknakeylhf t
//
LOCUS       XP_041340143             496 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-specific adenosine deaminase 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340143
VERSION     XP_041340143.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484209.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="tRNA-specific adenosine deaminase 1 isoform X3"
                     /calculated_mol_wt=55106
     Region          87..488
                     /region_name="A_deamin"
                     /note="Adenosine-deaminase (editase) domain; pfam02137"
                     /db_xref="CDD:460458"
     CDS             1..496
                     /gene="ADAT1"
                     /coded_by="XM_041484209.1:72..1562"
                     /db_xref="GeneID:121362577"
ORIGIN      
        1 mspavlarss gagvpqepal esramwsade iaglcylhyr trlpkqgkpd pnrewtsvaa
       61 vvkvesaaqr galdspenlq vtkevvamgt gtkcigqnkm rktgdilnds haeivakrsf
      121 qryllhqlwl aasdqqcifs pgtengkwkl kpniififfs shtpcgdasi fpisepenqf
      181 skpvteghea gqsaecrsnh nhlcpedkrk teemarnyim krmktddggc fsvitedlai
      241 qhesvkredn gnqkscecsa evqtanketg lvrskvvdvh rtgakcvpge lddaripglg
      301 yhcvgllrvk pgrgdrtcsm scsdklarwn vlgcqgallm hflqypvyls aivvgkcpys
      361 qeamrravie rcqrisslpd gfvtqevell qsdlqfehsr qaiqelqsns ktklvpcsaa
      421 iswsavpeqp ldvtsdgfrq gttkkaigsh qsrmktlkty wdykeaalny qeawrvlrsq
      481 allgwvknak eylhft
//
LOCUS       XP_041340148             438 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-specific adenosine deaminase 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340148
VERSION     XP_041340148.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484214.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..438
                     /product="tRNA-specific adenosine deaminase 1 isoform X4"
                     /calculated_mol_wt=49164
     Region          1..430
                     /region_name="A_deamin"
                     /note="Adenosine-deaminase (editase) domain; pfam02137"
                     /db_xref="CDD:460458"
     CDS             1..438
                     /gene="ADAT1"
                     /coded_by="XM_041484214.1:204..1520"
                     /db_xref="GeneID:121362577"
ORIGIN      
        1 mgtgtkcigq nkmrktgdil ndshaeivak rsfqryllhq lwlaasdqqc ifspgtengk
       61 wklkpniifi ffsshtpcgd asifpisepe nqfskpvteg heagqsaecr snhnhlcped
      121 krkteemarn yimkrmktdd ggcfsvited laiqhesvkr edngnqksce csaevqtank
      181 etglvrskvv dvhrtgakcv pgelddarip glgyhcvgll rvkpgrgdrt csmscsdkla
      241 rwnvlgcqga llmhflqypv ylsaivvgkc pysqeamrra viercqriss lpdgfvtqev
      301 ellqsdlqfe hsrqaiqelq snsktklvpc saaiswsavp eqpldvtsdg frqgttkkai
      361 gshqsrskic kvelfhkfqk lvtsisqedl pdtlrmktlk tywdykeaal nyqeawrvlr
      421 sqallgwvkn akeylhft
//
LOCUS       XP_041340160             393 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340160
VERSION     XP_041340160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484226.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="carbohydrate sulfotransferase 6-like"
                     /calculated_mol_wt=45180
     Region          45..298
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; pfam13469"
                     /db_xref="CDD:463887"
     CDS             1..393
                     /gene="LOC121362596"
                     /coded_by="XM_041484226.1:387..1568"
                     /db_xref="GeneID:121362596"
ORIGIN      
        1 mariripsta viifvtvqtg fllfmyarys sfmpqseekp sqvhililss wrsgssfvgq
       61 lfsqhpsvfy lmepawhvwv tmyqnsakvl hmavrdlvrs vflcdmsvfd aympwkrnls
      121 dlfqwaasra lcsapacdsf qrtditsela cktlcgrypf skveeackty shvvikevrf
      181 fdlkvlypll tdpslnlkii hlvrdpravv ksreqsvkal ardngivlst ngtkvedsky
      241 kvmqevcrsh vqiyetatlk ppnflkdryl mvrfedlvrd plseisemyk fadlsltprl
      301 kswiynithg qgpgkkkeaf kitsrdavsv sqawrnvlsf qkvkkiqevc kgainilgyq
      361 lvdsekeqrd ltldlvlprr qnqfswssfn pkh
//
LOCUS       XP_041340169             393 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340169
VERSION     XP_041340169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="carbohydrate sulfotransferase 6-like"
                     /calculated_mol_wt=45180
     Region          45..298
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; pfam13469"
                     /db_xref="CDD:463887"
     CDS             1..393
                     /gene="LOC121362596"
                     /coded_by="XM_041484235.1:462..1643"
                     /db_xref="GeneID:121362596"
ORIGIN      
        1 mariripsta viifvtvqtg fllfmyarys sfmpqseekp sqvhililss wrsgssfvgq
       61 lfsqhpsvfy lmepawhvwv tmyqnsakvl hmavrdlvrs vflcdmsvfd aympwkrnls
      121 dlfqwaasra lcsapacdsf qrtditsela cktlcgrypf skveeackty shvvikevrf
      181 fdlkvlypll tdpslnlkii hlvrdpravv ksreqsvkal ardngivlst ngtkvedsky
      241 kvmqevcrsh vqiyetatlk ppnflkdryl mvrfedlvrd plseisemyk fadlsltprl
      301 kswiynithg qgpgkkkeaf kitsrdavsv sqawrnvlsf qkvkkiqevc kgainilgyq
      361 lvdsekeqrd ltldlvlprr qnqfswssfn pkh
//
LOCUS       XP_041340177             393 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340177
VERSION     XP_041340177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484243.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="carbohydrate sulfotransferase 6-like"
                     /calculated_mol_wt=45180
     Region          45..298
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; pfam13469"
                     /db_xref="CDD:463887"
     CDS             1..393
                     /gene="LOC121362596"
                     /coded_by="XM_041484243.1:72..1253"
                     /db_xref="GeneID:121362596"
ORIGIN      
        1 mariripsta viifvtvqtg fllfmyarys sfmpqseekp sqvhililss wrsgssfvgq
       61 lfsqhpsvfy lmepawhvwv tmyqnsakvl hmavrdlvrs vflcdmsvfd aympwkrnls
      121 dlfqwaasra lcsapacdsf qrtditsela cktlcgrypf skveeackty shvvikevrf
      181 fdlkvlypll tdpslnlkii hlvrdpravv ksreqsvkal ardngivlst ngtkvedsky
      241 kvmqevcrsh vqiyetatlk ppnflkdryl mvrfedlvrd plseisemyk fadlsltprl
      301 kswiynithg qgpgkkkeaf kitsrdavsv sqawrnvlsf qkvkkiqevc kgainilgyq
      361 lvdsekeqrd ltldlvlprr qnqfswssfn pkh
//
LOCUS       XP_041340186             393 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340186
VERSION     XP_041340186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="carbohydrate sulfotransferase 6-like"
                     /calculated_mol_wt=45180
     Region          45..298
                     /region_name="Sulfotransfer_3"
                     /note="Sulfotransferase family; pfam13469"
                     /db_xref="CDD:463887"
     CDS             1..393
                     /gene="LOC121362596"
                     /coded_by="XM_041484252.1:142..1323"
                     /db_xref="GeneID:121362596"
ORIGIN      
        1 mariripsta viifvtvqtg fllfmyarys sfmpqseekp sqvhililss wrsgssfvgq
       61 lfsqhpsvfy lmepawhvwv tmyqnsakvl hmavrdlvrs vflcdmsvfd aympwkrnls
      121 dlfqwaasra lcsapacdsf qrtditsela cktlcgrypf skveeackty shvvikevrf
      181 fdlkvlypll tdpslnlkii hlvrdpravv ksreqsvkal ardngivlst ngtkvedsky
      241 kvmqevcrsh vqiyetatlk ppnflkdryl mvrfedlvrd plseisemyk fadlsltprl
      301 kswiynithg qgpgkkkeaf kitsrdavsv sqawrnvlsf qkvkkiqevc kgainilgyq
      361 lvdsekeqrd ltldlvlprr qnqfswssfn pkh
//
LOCUS       XP_041340197             371 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 231 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340197
VERSION     XP_041340197.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484263.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="transmembrane protein 231 isoform X1"
                     /calculated_mol_wt=41493
     Region          99..353
                     /region_name="TM231"
                     /note="Transmembrane protein 231; pfam10149"
                     /db_xref="CDD:462964"
     CDS             1..371
                     /gene="TMEM231"
                     /coded_by="XM_041484263.1:1..1116"
                     /db_xref="GeneID:121362620"
ORIGIN      
        1 mvqaggersq rrrgpcaggg gscracrchg pchnnsrgsa ggtsgspvpr qplehprfrp
       61 giagrgcsiw arhhlpgakp pavswstrsr stdfiapagf wlkqsayleq ptvrfryeal
      121 fvatigsgpg sflawstfpa fnrlqedrlr vpllstreed knqdgkmdql hfklelplqp
      181 tehvvgvqli llfsyqlyrm stfvmqsmaf lqffspvpgs qlyvngdlkl nqrqllnhcg
      241 ldtrynvsvv ngtspfasdy dlaniiaayw drnvttvfsd pspvwmtgra tdtpfiinat
      301 ihypvevily qpgfweiikf awiqyvsill iflwvfgrik tflfqnqvlt tipvspvlpv
      361 spvlsykqhq s
//
LOCUS       XP_041340206             320 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 231 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340206
VERSION     XP_041340206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484272.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="transmembrane protein 231 isoform X2"
                     /calculated_mol_wt=36365
     Region          1..302
                     /region_name="TM231"
                     /note="Transmembrane protein 231; pfam10149"
                     /db_xref="CDD:462964"
     CDS             1..320
                     /gene="TMEM231"
                     /coded_by="XM_041484272.1:67..1029"
                     /db_xref="GeneID:121362620"
ORIGIN      
        1 magvelfshp alytryragf csaaalalll italtyvppl lvayrshgfw lkqsayleqp
       61 tvrfryealf vatigsgpgs flawstfpaf nrlqedrlrv pllstreedk nqdgkmdqlh
      121 fklelplqpt ehvvgvqlil lfsyqlyrms tfvmqsmafl qffspvpgsq lyvngdlkln
      181 qrqllnhcgl dtrynvsvvn gtspfasdyd laniiaaywd rnvttvfsdp spvwmtgrat
      241 dtpfiinati hypvevilyq pgfweiikfa wiqyvsilli flwvfgrikt flfqnqvltt
      301 ipvspvlpvs pvlsykqhqs
//
LOCUS       XP_041340220             335 aa            linear   VRT 06-MAY-2021
DEFINITION  telomeric repeat-binding factor 2-interacting protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340220
VERSION     XP_041340220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..335
                     /product="telomeric repeat-binding factor 2-interacting
                     protein 1"
                     /calculated_mol_wt=36890
     Region          20..99
                     /region_name="BRCT_2"
                     /note="BRCT domain, a BRCA1 C-terminus domain; pfam16589"
                     /db_xref="CDD:465186"
     Region          105..167
                     /region_name="SANT"
                     /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains.
                     Tandem copies of the domain bind telomeric DNA tandem
                     repeatsas part of the capping complex. Binding is sequence
                     dependent for repeats which contain the G/C rich motif
                     [C2-3 A (CA)1-6]. The domain is...; cl21498"
                     /db_xref="CDD:473887"
     Region          243..335
                     /region_name="rap1_RCT"
                     /note="C-terminal domain of RAP1 recruits proteins to
                     telomeres; cd11653"
                     /db_xref="CDD:212167"
     Site            order(247,250..251,254,265..266,269..270,272..273,
                     276..278,332)
                     /site_type="other"
                     /note="recruitment target interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:212167"
     CDS             1..335
                     /gene="LOC121362632"
                     /coded_by="XM_041484286.1:1..1008"
                     /db_xref="GeneID:121362632"
ORIGIN      
        1 malggagaam aggqagaars rslflwddgr pmrfylrpgl aklrlaplvl agggrlcrvq
       61 epgavllaqp gevapdgavs teyvaecvkr nqrlplepfl ltargrlaft eaedaallqa
      121 vrgqgtvrvs gralwieler sgltrhswqa mrdrylrhll prlweppqte dptqirglfa
      181 aanrefeste sesdssdvae lptqdglrrs pgetaselkt gpedsafpdi qlqrqerpks
      241 tcssnvvgqv vktmehfmek favdlltvtq aflknsgdve atsyflqtgq rldgypvwsr
      301 eddlelqkdd ehvrnqliak fgaenvakri vfres
//
LOCUS       XP_041340234             117 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor-associated protein-like 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041340234
VERSION     XP_041340234.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484300.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..117
                     /product="gamma-aminobutyric acid receptor-associated
                     protein-like 2"
                     /calculated_mol_wt=13520
     Region          5..116
                     /region_name="Ubl_ATG8_GABARAPL2"
                     /note="ubiquitin-like (Ubl) domain found in GABA type A
                     receptor associated protein like 2 (GABARAPL2, also known
                     as GATE16); cd17163"
                     /db_xref="CDD:340683"
     Site            order(28,34..35,46,49,58..59,61..63,65..67,73,75..77,79,
                     82..83,86..88,112..116)
                     /site_type="other"
                     /note="Atg7 interaction site [polypeptide binding]"
                     /db_xref="CDD:340683"
     Site            order(36,61,65,73..77,79,82..83,86..87,108,110..116)
                     /site_type="other"
                     /note="Atg4 interaction site [polypeptide binding]"
                     /db_xref="CDD:340683"
     CDS             1..117
                     /gene="GABARAPL2"
                     /coded_by="XM_041484300.1:109..462"
                     /db_xref="GeneID:121362637"
ORIGIN      
        1 mkwmfkedha lehrcvesak irakypdrvp vivekvsgsq ivdidkrkyl vpsditvaqf
       61 mwiirkriql psekaiflfv dktvpqsslt mgqlyekekd edgflyvays gentfgf
//
LOCUS       XP_041340244             162 aa            linear   VRT 06-MAY-2021
DEFINITION  chromosome transmission fidelity protein 8 homolog isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041340244
VERSION     XP_041340244.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484310.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="chromosome transmission fidelity protein 8
                     homolog isoform X1"
                     /calculated_mol_wt=16590
     Region          63..154
                     /region_name="Ctf8"
                     /note="pfam09696"
                     /db_xref="CDD:430758"
     CDS             1..162
                     /gene="CHTF8"
                     /coded_by="XM_041484310.1:99..587"
                     /db_xref="GeneID:121362642"
ORIGIN      
        1 mgalwgtgae vhpgvprgeg pgapaplpaa pvltvspqpl agpgmvqivi ssggtgalaq
       61 wvllelqgev eprqsgelag sllgdlhytc egvpvlivgh hilygkvvql ekpfavlvkq
      121 ggasqpspvg phghytvtal iktkllfktr pkpiithvpk kv
//
LOCUS       XP_041340253             118 aa            linear   VRT 06-MAY-2021
DEFINITION  chromosome transmission fidelity protein 8 homolog isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041340253
VERSION     XP_041340253.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484319.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="chromosome transmission fidelity protein 8
                     homolog isoform X2"
                     /calculated_mol_wt=12473
     Region          19..110
                     /region_name="Ctf8"
                     /note="pfam09696"
                     /db_xref="CDD:430758"
     CDS             1..118
                     /gene="CHTF8"
                     /coded_by="XM_041484319.1:40..396"
                     /db_xref="GeneID:121362642"
ORIGIN      
        1 mvqivissgg tgalaqwvll elqgeveprq sgelagsllg dlhytcegvp vlivghhily
       61 gkvvqlekpf avlvkqggas qpspvgphgh ytvtaliktk llfktrpkpi ithvpkkv
//
LOCUS       XP_041340262             606 aa            linear   VRT 06-MAY-2021
DEFINITION  protein spire homolog 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340262
VERSION     XP_041340262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484328.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..606
                     /product="protein spire homolog 2"
                     /calculated_mol_wt=67866
     Region          <1..113
                     /region_name="KIND"
                     /note="Kinase non-catalytic C-lobe domain; pfam16474"
                     /db_xref="CDD:465129"
     Region          138..169
                     /region_name="WH2_Spire_1-2_r1"
                     /note="first tandem Wiskott-Aldrich Syndrome Homology
                     (WASP) region 2 (WH2 motif) repeat of protein Spire
                     homologs 1 and 2; cd22065"
                     /db_xref="CDD:409208"
     Site            order(151..152,154..156,158..160,164..167)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409208"
     Region          164..167
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409208"
     Region          180..209
                     /region_name="WH2_Spire2_r2"
                     /note="second tandem Wiskott-Aldrich Syndrome Homology
                     (WASP) region 2 (WH2 motif) repeat of protein Spire
                     homolog 2; cd22079"
                     /db_xref="CDD:409222"
     Site            order(183..184,186..188,190..192,198..201)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409222"
     Region          198..201
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409222"
     Region          212..234
                     /region_name="WH2_Spire1-2_r3"
                     /note="third tandem Wiskott-Aldrich Syndrome Homology
                     (WASP) region 2 (WH2 motif) repeat of protein Spire
                     homologs 1 and 2; cd22186"
                     /db_xref="CDD:409226"
     Site            order(215..216,218..220,222..224,229..232)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409226"
     Region          244..265
                     /region_name="WH2_Spire2_r4"
                     /note="fourth tandem Wiskott-Aldrich Syndrome Homology
                     (WASP) region 2 (WH2 motif) repeat of protein Spire
                     homolog 2; cd22081"
                     /db_xref="CDD:409224"
     Site            order(247..248,250..252,254..256,261..264)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409224"
     Region          460..574
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cl28890"
                     /db_xref="CDD:333710"
     Site            order(478..483,488,561)
                     /site_type="other"
                     /note="phosphatidylinositol 3-phosphate binding site
                     [chemical binding]"
                     /db_xref="CDD:277249"
     CDS             1..606
                     /gene="SPIRE2"
                     /coded_by="XM_041484328.1:62..1882"
                     /db_xref="GeneID:121362660"
ORIGIN      
        1 mvqslgfavy raldwglden eerelsprle qlidlmtnsd sedsgcatad egyggqdeee
       61 eggegpprsv rtfgqamrcc aarladpaga pahyqavcra lfaetvelma flakirdake
      121 llqklkedee eeerpaaelg nlrntdwarl wvqlmrelrh gvklkkvqek qfnplpteyq
      181 ltpfemlmqd irarnyklrk vmvdgdippr vkkdahelil dfirsrpplk qaserrlrpl
      241 pqkqrtlhek ileeirqerk lrpveqkgys slpciphaca grlsssscle lsrcpasavp
      301 arprprvllk aptlaemeem nlsededspa tevplkrdrs fseqdlaqlq sqlggdqavp
      361 rdpeplqpel rprsgsvpas chplpdgpal praalgalee rpedgsgagp assskhlwle
      421 fshpveslal tveeminvrr vlvkaemekf lqskelyssl rrgkvccccr akfplfswpt
      481 scffckrsvc sscslkmkmp skklahipvy algfeslpgs llpkapplrr repfhslsgp
      541 cwrrveeefp hiyaqgsvlr dvcsdcagfv tdvvsssrrs vavlnasaas rrhakarsly
      601 sdawlk
//
LOCUS       XP_041340276             128 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF166 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340276
VERSION     XP_041340276.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484342.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..128
                     /product="E3 ubiquitin-protein ligase RNF166 isoform X1"
                     /calculated_mol_wt=14274
     Region          40..99
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     CDS             1..128
                     /gene="RNF166"
                     /coded_by="XM_041484342.1:149..535"
                     /db_xref="GeneID:121362666"
ORIGIN      
        1 mrshvsscak vqeqmancpk fvpvvptsqp ipsnipnrst fvcpycgarn ldqqelvkhc
       61 menhrndpnk vvcpvcsamp wgdpsyksan flqhllhrhk fsydtfvdyn ideeaalqaa
      121 lalslsen
//
LOCUS       XP_041340284             209 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF166 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340284
VERSION     XP_041340284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF166 isoform X2"
                     /calculated_mol_wt=22705
     Region          40..99
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     CDS             1..209
                     /gene="RNF166"
                     /coded_by="XM_041484350.1:282..911"
                     /db_xref="GeneID:121362666"
ORIGIN      
        1 mrshvsscak vqeqmancpk fvpvvptsqp ipsnipnrst fvcpycgarn ldqqelvkhc
       61 menhrndpnk vvcpvcsamp wgdpsyksan flqhllhrhk fsydtfvitq anehvdwews
      121 grqeldpgag rtqvggsagi flghpgyfwa fpfpqqnceg pgrmvgldpg agcpwngcpc
      181 ripapssrsp qksgtaspcg dpslgmghc
//
LOCUS       XP_041340293             209 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF166 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340293
VERSION     XP_041340293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484359.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="E3 ubiquitin-protein ligase RNF166 isoform X2"
                     /calculated_mol_wt=22705
     Region          40..99
                     /region_name="zf-Di19"
                     /note="Drought induced 19 protein (Di19), zinc-binding;
                     pfam05605"
                     /db_xref="CDD:428539"
     CDS             1..209
                     /gene="RNF166"
                     /coded_by="XM_041484359.1:289..918"
                     /db_xref="GeneID:121362666"
ORIGIN      
        1 mrshvsscak vqeqmancpk fvpvvptsqp ipsnipnrst fvcpycgarn ldqqelvkhc
       61 menhrndpnk vvcpvcsamp wgdpsyksan flqhllhrhk fsydtfvitq anehvdwews
      121 grqeldpgag rtqvggsagi flghpgyfwa fpfpqqnceg pgrmvgldpg agcpwngcpc
      181 ripapssrsp qksgtaspcg dpslgmghc
//
LOCUS       XP_041340307            1428 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group A protein [Pyrgilauda ruficollis].
ACCESSION   XP_041340307
VERSION     XP_041340307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1428
                     /product="Fanconi anemia group A protein"
                     /calculated_mol_wt=157687
     Region          148..505
                     /region_name="Fanconi_A_N"
                     /note="Fanconi anaemia group A protein N terminus;
                     pfam15865"
                     /db_xref="CDD:464911"
     Region          1233..1295
                     /region_name="Fanconi_A"
                     /note="Fanconi anaemia group A protein; pfam03511"
                     /db_xref="CDD:460952"
     CDS             1..1428
                     /gene="FANCA"
                     /coded_by="XM_041484373.1:1..4287"
                     /db_xref="GeneID:121362681"
ORIGIN      
        1 magagcrswr dllagrarkr rspfgsgael qqaalrlldq hqnladllle vgdsakpgvq
       61 dgaehqgvsp esfivsvlqe qasklgvpta tlaaknavan vericqdcas psgvpllnsd
      121 qrkrltcllq tvkgllannm fcrslfcqem wkmkeppvle avwhlhssdi vglaellers
      181 pagpaavewl csslcglceq agdiscgdte laqrilsdfa ivflqngfeq aselgrkvel
      241 qkvayicrav lqrmlawvld avgkekqedv smvqavrfwl nvfnvslygs vahpdslrqf
      301 frhtltevlt ynpvlkvsda iqmqkewsft rtsplltaly rkllvafsvk esicqlqqvl
      361 ethevnwqhv lscvstlvvc qaeaeqlfkd llshlllkaf gnydmenmit afliarqaal
      421 egpavfmpys ewfkasfgna gghhgsskks lvflleflse lvpfeaapyl kvhimfppfv
      481 aakhrsllld yitlaktrla dlkvaiedmg lyedlsapee avqpeaqalr dvekalqife
      541 ntrkiptsvi easifrrpyy tswflpallr prvlpktpdg rmafidslkr adkipsnlys
      601 tylqachamk ekvlqddsta epshskepfe qlkaelaelr tlvvdqaqwe evaaqlavvs
      661 drlravlgds sqedaaapfs cplqvaapap glapchpsvv dllltsfcqt llaassfnpp
      721 drqgpclsll vrmmcghrnl lpallgrlcq lihhqgpslg aahilglaaf vihlsecral
      781 ipgveadfga sqavpgkals vseywssllv crtqesfafc lrfctaaaay lmckfsscsr
      841 edfcalvppg likklqhlvp rlsleargvl ceeakgalsw sslscpslny rraslclwrq
      901 agfqellkek afqlsfrewl lmelevcpeq dilsaserqd fhywaiyqry lpapsaaggc
      961 dgdlekacgv llnaildssh rldlggcgqs ktsvspeilc rlqelvlelr crpkllpgcs
     1021 aaqrhfllei lqgrltgrqq gsalgeqlwr qqelllhrri lvglpastli ttcwkgskav
     1081 ldcdsffcfv nselknvssr gyalsydita hffrgllsas ldcedaaegv nealaacqtk
     1141 cpvvllsaal wwprlepvlc sqwkrlfgap laeeldrlrg whgsgtrflc sgaafpvsdp
     1201 pwlsaaflhg ailqqsprgr gtealqrlgt daeqllvall ffslldlisa riapkegvdf
     1261 qtslgwslqi lqslegrgts wpllfhsaeg epgrcrvlrs aasqrhtrll plaffsltps
     1321 fhrellqqep tflsvalqmy iqllqlfveg evlpqsdqdp tehdplelis aarqfllgai
     1381 phcpaqslgn iqpllstcee ldpelgatll hfsrpavdve leeeleff
//
LOCUS       XP_041340321             548 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronan synthase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041340321
VERSION     XP_041340321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484387.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..548
                     /product="hyaluronan synthase 3"
                     /calculated_mol_wt=61887
     Region          82..359
                     /region_name="GT2_HAS"
                     /note="Hyaluronan synthases catalyze polymerization of
                     hyaluronan; cd06434"
                     /db_xref="CDD:133056"
     Site            210..212
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133056"
     CDS             1..548
                     /gene="HAS3"
                     /coded_by="XM_041484387.1:1..1647"
                     /db_xref="GeneID:121362687"
ORIGIN      
        1 mpgslstalr vvgtslfava vlggilaayv tgyqfihtek hylsfglyga ilglhlfiqs
       61 lfaflehrrm rgegqpvrpg rsvalciaaf qedpdyltkc lrsvkriafp dlkvvmvvdg
      121 ngpddtymld ifrdvmgseh sgsyvwrsnf hawgegetea glreglarvq alvrsntysc
      181 ilqkwggkre vmytafralg dsvdyiqvcd sdtvldpact aemlrilead phvggvggdv
      241 qilnkydswl sflssvrywm afnveracqs yfgcvqcisg plgmyrnall qqfledwyhq
      301 tflgskcsfg ddrhltnrvl slgyrtkyta rskcltetpt rylrwlnqqt rwsksyfrew
      361 lynalwfhkh hlwmtyesvv tgffpfflia tviqlfyrgr vwnillfllt vqlvgvikat
      421 yacflrgsae mifmslyall ymssllpaki faiatinksg wgtsgrrtiv vnfvgllpvs
      481 vwvavllggl aytaysqdlf setevaflvs gailyacywv alltlylaiv arrcgkrqeq
      541 cglvftev
//
LOCUS       XP_041340336             581 aa            linear   VRT 06-MAY-2021
DEFINITION  telomeric repeat-binding factor 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340336
VERSION     XP_041340336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="telomeric repeat-binding factor 2 isoform X1"
                     /calculated_mol_wt=64691
     Region          21..213
                     /region_name="TRFH"
                     /note="Telomeric Repeat binding Factor or TTAGGG Repeat
                     binding Factor, central (dimerization) domain Homology;
                     TRFH. Telomeres are protein/DNA complexes that make up the
                     physical ends of eukaryotic linear chromosomes and are
                     essential for chromosome stability; cl02779"
                     /db_xref="CDD:413471"
     Site            order(59,62,76,80,84,99..103,111,114..115,118)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238174"
     Region          <258..>372
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          357..397
                     /region_name="TERF2_RBM"
                     /note="Telomeric repeat-binding factor 2 Rap1-binding
                     motif; pfam16772"
                     /db_xref="CDD:435576"
     Site            order(363..369,371..373,375..377,386,389..394)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212553"
     Region          529..577
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(529..531,549,551..552,563,565..567,569..571,
                     573..574)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..581
                     /gene="TERF2"
                     /coded_by="XM_041484402.1:115..1860"
                     /db_xref="GeneID:121362692"
ORIGIN      
        1 maarrrerer dpepqragma alpektvngw vlqfyfhrai eayrsgrnrd frqfrdimqa
       61 llvrpldrep dmaqmlrimq llsrveegen ldailtdctf dkeseltple sailvldfir
      121 eefsvadrtm eavqkmvkea avvvcirnke fekasdivkk hmgkeprnqk krnewlavir
      181 eknpshpkvr nfsyedfqqs ifeflkgymd dsepalltll kktldsehka kpslgtsefa
      241 dglheqaaap easaraespa rapepagate dlegapspak raagptaase imeeasgpaa
      301 avepmevvtd paatpehlta aydtlkgtpe pmevakepaa aapelprvst repqrqppga
      361 vtscgisvlr eafkilsdsg dsdalfskld etdlpspkql spsvshrtkr crevenqase
      421 tseptaiphn iknlfsisnl iveldgsssk ssecpdssqe hvvssaskpa pklpdeplsa
      481 qseksfqgrw nsscgteekd swsdedelfa naasleknkv snnssskkqk wtmeesewik
      541 egvkkygegr wkticlkfpf rnrtsvmikd rwrtmkklgm l
//
LOCUS       XP_041340345             580 aa            linear   VRT 06-MAY-2021
DEFINITION  telomeric repeat-binding factor 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340345
VERSION     XP_041340345.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484411.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..580
                     /product="telomeric repeat-binding factor 2 isoform X2"
                     /calculated_mol_wt=64563
     Region          21..212
                     /region_name="TRFH"
                     /note="Telomeric Repeat binding Factor or TTAGGG Repeat
                     binding Factor, central (dimerization) domain Homology;
                     TRFH. Telomeres are protein/DNA complexes that make up the
                     physical ends of eukaryotic linear chromosomes and are
                     essential for chromosome stability; cl02779"
                     /db_xref="CDD:413471"
     Site            order(59,62,76,80,84,99..103,111,114..115,118)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238174"
     Region          <257..>371
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          356..396
                     /region_name="TERF2_RBM"
                     /note="Telomeric repeat-binding factor 2 Rap1-binding
                     motif; pfam16772"
                     /db_xref="CDD:435576"
     Site            order(362..368,370..372,374..376,385,388..393)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212553"
     Region          528..576
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(528..530,548,550..551,562,564..566,568..570,
                     572..573)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..580
                     /gene="TERF2"
                     /coded_by="XM_041484411.1:117..1859"
                     /db_xref="GeneID:121362692"
ORIGIN      
        1 maarrrerer dpepqragma alpektvngw vlqfyfhrai eayrsgrnrd frqfrdimqa
       61 llvrpldrep dmaqmlrimq llsrveegen ldailtdctf dkeseltple sailvldfir
      121 eefsvadrtm eavqkmvkea avvvcirnke fekasdivkk hmgkeprnqk rnewlavire
      181 knpshpkvrn fsyedfqqsi feflkgymdd sepalltllk ktldsehkak pslgtsefad
      241 glheqaaape asaraespar apepagated legapspakr aagptaasei meeasgpaaa
      301 vepmevvtdp aatpehltaa ydtlkgtpep mevakepaaa apelprvstr epqrqppgav
      361 tscgisvlre afkilsdsgd sdalfsklde tdlpspkqls psvshrtkrc revenqaset
      421 septaiphni knlfsisnli veldgsssks secpdssqeh vvssaskpap klpdeplsaq
      481 seksfqgrwn sscgteekds wsdedelfan aasleknkvs nnssskkqkw tmeesewike
      541 gvkkygegrw kticlkfpfr nrtsvmikdr wrtmkklgml
//
LOCUS       XP_041340355             576 aa            linear   VRT 06-MAY-2021
DEFINITION  telomeric repeat-binding factor 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340355
VERSION     XP_041340355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484421.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..576
                     /product="telomeric repeat-binding factor 2 isoform X3"
                     /calculated_mol_wt=64178
     Region          21..208
                     /region_name="TRFH"
                     /note="Telomeric Repeat binding Factor or TTAGGG Repeat
                     binding Factor, central (dimerization) domain Homology;
                     TRFH. Telomeres are protein/DNA complexes that make up the
                     physical ends of eukaryotic linear chromosomes and are
                     essential for chromosome stability; cl02779"
                     /db_xref="CDD:413471"
     Site            order(59,62,76,80,84,94..98,106,109..110,113)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238174"
     Region          <253..>367
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          352..392
                     /region_name="TERF2_RBM"
                     /note="Telomeric repeat-binding factor 2 Rap1-binding
                     motif; pfam16772"
                     /db_xref="CDD:435576"
     Site            order(358..364,366..368,370..372,381,384..389)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212553"
     Region          524..572
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(524..526,544,546..547,558,560..562,564..566,
                     568..569)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..576
                     /gene="TERF2"
                     /coded_by="XM_041484421.1:111..1841"
                     /db_xref="GeneID:121362692"
ORIGIN      
        1 maarrrerer dpepqragma alpektvngw vlqfyfhrai eayrsgrnrd frqfrdimqa
       61 llvrpldrep dmaqmlrimq llsrveegen ldctfdkese ltplesailv ldfireefsv
      121 adrtmeavqk mvkeaavvvc irnkefekas divkkhmgke prnqkkrnew lavireknps
      181 hpkvrnfsye dfqqsifefl kgymddsepa lltllkktld sehkakpslg tsefadglhe
      241 qaaapeasar aesparapep agatedlega pspakraagp taaseimeea sgpaaavepm
      301 evvtdpaatp ehltaaydtl kgtpepmeva kepaaaapel prvstrepqr qppgavtscg
      361 isvlreafki lsdsgdsdal fskldetdlp spkqlspsvs hrtkrcreve nqasetsept
      421 aiphniknlf sisnliveld gssskssecp dssqehvvss askpapklpd eplsaqseks
      481 fqgrwnsscg teekdswsde delfanaasl eknkvsnnss skkqkwtmee sewikegvkk
      541 ygegrwktic lkfpfrnrts vmikdrwrtm kklgml
//
LOCUS       XP_041340366             529 aa            linear   VRT 06-MAY-2021
DEFINITION  telomeric repeat-binding factor 2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340366
VERSION     XP_041340366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="telomeric repeat-binding factor 2 isoform X4"
                     /calculated_mol_wt=59224
     Region          21..213
                     /region_name="TRFH"
                     /note="Telomeric Repeat binding Factor or TTAGGG Repeat
                     binding Factor, central (dimerization) domain Homology;
                     TRFH. Telomeres are protein/DNA complexes that make up the
                     physical ends of eukaryotic linear chromosomes and are
                     essential for chromosome stability; cl02779"
                     /db_xref="CDD:413471"
     Site            order(59,62,76,80,84,99..103,111,114..115,118)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238174"
     Region          477..525
                     /region_name="SANT_TRF"
                     /note="Telomere repeat binding factor-like DNA-binding
                     domains of the SANT/myb-like family; cd11660"
                     /db_xref="CDD:212558"
     Site            order(477..479,497,499..500,511,513..515,517..519,
                     521..522)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212558"
     CDS             1..529
                     /gene="TERF2"
                     /coded_by="XM_041484432.1:114..1703"
                     /db_xref="GeneID:121362692"
ORIGIN      
        1 maarrrerer dpepqragma alpektvngw vlqfyfhrai eayrsgrnrd frqfrdimqa
       61 llvrpldrep dmaqmlrimq llsrveegen ldailtdctf dkeseltple sailvldfir
      121 eefsvadrtm eavqkmvkea avvvcirnke fekasdivkk hmgkeprnqk krnewlavir
      181 eknpshpkvr nfsyedfqqs ifeflkgymd dsepalltll kktldsehka kpslgtsefa
      241 dglheqaaap easaraespa rapepagate dlegapspak raagptaase imeeasgpaa
      301 avepmevvtd paatpehlta aydtlkgtpe pmevakepaa aapelprvst repqrtkrcr
      361 evenqasets eptaiphnik nlfsisnliv eldgssskss ecpdssqehv vssaskpapk
      421 lpdeplsaqs eksfqgrwns scgteekdsw sdedelfana asleknkvsn nssskkqkwt
      481 meesewikeg vkkygegrwk ticlkfpfrn rtsvmikdrw rtmkklgml
//
LOCUS       XP_041340379             687 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 25 [Pyrgilauda ruficollis].
ACCESSION   XP_041340379
VERSION     XP_041340379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484445.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="transcription factor 25"
                     /calculated_mol_wt=78156
     Region          258..598
                     /region_name="Tcf25"
                     /note="Transcriptional repressor TCF25; pfam04910"
                     /db_xref="CDD:461476"
     CDS             1..687
                     /gene="TCF25"
                     /coded_by="XM_041484445.1:17..2080"
                     /db_xref="GeneID:121362703"
ORIGIN      
        1 msrralrrlr geqrgqegpg lgelglgldp gpehareggp ppapgkgprg tsragvsnrf
       61 elipaeesed epvaeeerad trlseqdtaa gsprgsrdrs kegavspsea dgdghregqe
      121 aqqpdrtlat snkprkkkkk rktkknsage tvedndledi esllermeep rlapqsqggv
      181 padsrpllyv ehrnlnpene lkryfgarav lgdqrprqrq rqyvrsmwlt apkntwprys
      241 ktgitmqlld trrgvqhftf ehhreyqqvq fkfldavesm dpnnivlllq mnpyhvdsll
      301 qlsdvcrmqe dqemardlie ralyslecaf hpvfsltsgt crldyrrpen rafflalfkh
      361 lmflekrgcp rtalefckli lsldpendpl cvlllidfls lrareytflt rlfqeweshr
      421 nlsqlpnfaf svplayffls qqeerpeler sqareraarl iqlalimfps vlmplldhcs
      481 vqpdarvash pffglnaqis qspalnqlts lyvgrthalw kdpavmawle phvhevlrmv
      541 daqdalvqea ehkrkiryqs aprniyrhii lsemkeataa lplevtsqpv mgfdplppld
      601 sivsytrper tshpsnestl slffrsllpn fnlqgdirhd gddeagaaqd lnqgvnrlma
      661 amrdmlaniq fqepprednp egdgdwd
//
LOCUS       XP_041340391             168 aa            linear   VRT 06-MAY-2021
DEFINITION  dysbindin domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340391
VERSION     XP_041340391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="dysbindin domain-containing protein 1 isoform
                     X1"
                     /calculated_mol_wt=18127
     Region          40..147
                     /region_name="Dysbindin"
                     /note="Dysbindin (Dystrobrevin binding protein 1);
                     pfam04440"
                     /db_xref="CDD:461312"
     CDS             1..168
                     /gene="DBNDD1"
                     /coded_by="XM_041484457.1:208..714"
                     /db_xref="GeneID:121362709"
ORIGIN      
        1 mqaeargefc srdqrpelgk eplvperpag tpthgpaqet prvpaeeqgg ipipsagllq
       61 vterrqplss vsslevhfdl ldlteltdms dqelaevfad sdeenvaaet pgglqppppp
      121 ragylrspsw trareqgrdk khlsdpelpp gppgppdafl paerprep
//
LOCUS       XP_041340401             162 aa            linear   VRT 06-MAY-2021
DEFINITION  dysbindin domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340401
VERSION     XP_041340401.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484467.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="dysbindin domain-containing protein 1 isoform
                     X2"
                     /calculated_mol_wt=17105
     Region          34..141
                     /region_name="Dysbindin"
                     /note="Dysbindin (Dystrobrevin binding protein 1);
                     pfam04440"
                     /db_xref="CDD:461312"
     CDS             1..162
                     /gene="DBNDD1"
                     /coded_by="XM_041484467.1:98..586"
                     /db_xref="GeneID:121362709"
ORIGIN      
        1 maapaavatg elgkeplvpe rpagtpthgp aqetprvpae eqggipipsa gllqvterrq
       61 plssvsslev hfdlldltel tdmsdqelae vfadsdeenv aaetpgglqp ppppragylr
      121 spswtrareq grdkkhlsdp elppgppgpp daflpaerpr ep
//
LOCUS       XP_041340414             149 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b5 [Pyrgilauda ruficollis].
ACCESSION   XP_041340414
VERSION     XP_041340414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484480.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..149
                     /product="cytochrome b5"
                     /calculated_mol_wt=16093
     Region          27..99
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     CDS             1..149
                     /gene="LOC121362715"
                     /coded_by="XM_041484480.1:55..504"
                     /db_xref="GeneID:121362715"
ORIGIN      
        1 meggrrgeaa aaaaaaaggd gpapvftlee vakrnssrea wlvihgrvyd vtrfleehpg
       61 geevlleqag rdatesfedv ghstdareml kqyyigevhp ndrgkeaskn psrtssgqts
      121 fwstwlipif galalglmyr yyisdgkss
//
LOCUS       XP_041340426             778 aa            linear   VRT 06-MAY-2021
DEFINITION  cadherin-15 [Pyrgilauda ruficollis].
ACCESSION   XP_041340426
VERSION     XP_041340426.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484492.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..778
                     /product="cadherin-15"
                     /calculated_mol_wt=84294
     Region          50..146
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(54..55,109,111,142,144..145)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          154..254
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(161..162,217,219,250,252..253)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          262..369
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(268..269,327,329,366,368..369)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          377..477
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(384..385,440,442,473,475..476)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          498..577
                     /region_name="CA_like"
                     /note="Cadherin repeat-like domain; cl46864"
                     /db_xref="CDD:481204"
     Region          718..777
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     CDS             1..778
                     /gene="CDH15"
                     /coded_by="XM_041484492.1:105..2441"
                     /db_xref="GeneID:121362724"
ORIGIN      
        1 mgpplllacl laplcargas paqagaaapq gwrqheaprr vkrawvippi svsenhkrip
       61 hllvqiksdk qqpggviysi kgpgvdeepl gifsidkfsg kvflnamldr eehdryrlra
      121 faldlggvtl eeptdleiiv vdqndnrplf rqdvftgrvv egaepgtcvm tvdatdaddp
      181 dtdnaalrys iveqgaagmf sinattgeic tarpgldret mgvynltvqa admsgdgltt
      241 tamaviyled indnppeftk eefsmeveeq aagvdvgkvf vhdkdlagsp swlakftile
      301 gdpegafair tdphtndgvl svvkpldhev rdrfeltvsv qnerplepsa pgspralatv
      361 rvrvrdvnea pafrenprri svlegtppgt pittytasdp dthqiqtlsy allydpadwl
      421 qldphagtvr tkrellhpsa flqggwyial vlarddaepp lsatgtlsie ilevndhapq
      481 lqppagvlcg rpgrggtlll gatdddrpph gapfhfqlsp qhpqlarnws iarfnvthav
      541 lavlaelpeg pyslplllrd sgtppreqqq llnvsvchcg rdgtcldgal aaatagagit
      601 lgalmiilgs tilllvlaal gaarvrgrrr alrkgllqrs rddmrdniln ydeqgggeed
      661 qdaydinqlr hpelfsprak pplrrdapls sgtpmaprkl psspsdiedf inegleaads
      721 dpsvppydta liydyegsgs vasplssivs sltdedqdyd ylsewgprfr rladlygh
//
LOCUS       XP_041340438             672 aa            linear   VRT 06-MAY-2021
DEFINITION  putative solute carrier family 22 member 31 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340438
VERSION     XP_041340438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484504.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..672
                     /product="putative solute carrier family 22 member 31
                     isoform X1"
                     /calculated_mol_wt=71192
     Region          140..608
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(181..182,184..186,189,262,265..266,269,416,419..420,
                     423..425,428,448,452,536..537,541,545,561,564..565,
                     568..569,572)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..672
                     /gene="SLC22A31"
                     /coded_by="XM_041484504.1:229..2247"
                     /db_xref="GeneID:121362731"
ORIGIN      
        1 mtpggvwgwl gepcgrvlrg wrvsralgta gtapsplsph fclwgggspd alqphpsqpc
       61 gqcqgvcqap hadtsplcpr sgtwcvprag rcpwsrprtc wagrwvvspp awlvtgsggp
      121 raapgaggtv snpsqlvpgr fgrrptflls lalavpagla valavdflmv lvarllfgaa
      181 lagaflalyv areceggvrg glgaedapgr pgvwdaagcp gvvwntgcsr vqdarcpwhp
      241 lwpprplpgl elcdpphrlg vtmvagffwi agelllpgla llcrdwrvlq gavtmilall
      301 aaswwcpall lesprwllat rqperarktl qalaedncpq dsllagawga psaigripka
      361 llwgwcnrag siplspvpae lealsegppr pryhsvceic strviwkngv ilgfaafigs
      421 girhcftrnl vphlphffss hlallgteaa aclfvcltae rfgrrailll ctvltgissl
      481 lllaltqckp prdprhaapa ggrkggcgic pltcfpppad llelivltls vvgtaashav
      541 tmlsiffase vlptvvrgag lglvvganfv gkaaapitai pnsrgfflhh vvfasfaila
      601 vlsimllpes qgrglpqslq dgesqrrppl frrppredhl pllaphaiph dysclaastk
      661 rmlrspeppr em
//
LOCUS       XP_041340446             640 aa            linear   VRT 06-MAY-2021
DEFINITION  putative solute carrier family 22 member 31 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340446
VERSION     XP_041340446.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484512.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..640
                     /product="putative solute carrier family 22 member 31
                     isoform X2"
                     /calculated_mol_wt=68029
     Region          140..576
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(181..182,184..186,189,262,265..266,269,416,419..420,
                     423..425,428,448,452,504..505,509,513,529,532..533,
                     536..537,540)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..640
                     /gene="SLC22A31"
                     /coded_by="XM_041484512.1:229..2151"
                     /db_xref="GeneID:121362731"
ORIGIN      
        1 mtpggvwgwl gepcgrvlrg wrvsralgta gtapsplsph fclwgggspd alqphpsqpc
       61 gqcqgvcqap hadtsplcpr sgtwcvprag rcpwsrprtc wagrwvvspp awlvtgsggp
      121 raapgaggtv snpsqlvpgr fgrrptflls lalavpagla valavdflmv lvarllfgaa
      181 lagaflalyv areceggvrg glgaedapgr pgvwdaagcp gvvwntgcsr vqdarcpwhp
      241 lwpprplpgl elcdpphrlg vtmvagffwi agelllpgla llcrdwrvlq gavtmilall
      301 aaswwcpall lesprwllat rqperarktl qalaedncpq dsllagawga psaigripka
      361 llwgwcnrag siplspvpae lealsegppr pryhsvceic strviwkngv ilgfaafigs
      421 girhcftrnl vphlphffss hlallgteaa aclfvcltae rfgrrailll ctvltgissl
      481 lllaltqyll elivltlsvv gtaashavtm lsiffasevl ptvvrgaglg lvvganfvgk
      541 aaapitaipn srgfflhhvv fasfailavl simllpesqg rglpqslqdg esqrrpplfr
      601 rppredhlpl laphaiphdy sclaastkrm lrspepprem
//
LOCUS       XP_041340453             638 aa            linear   VRT 06-MAY-2021
DEFINITION  putative solute carrier family 22 member 31 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340453
VERSION     XP_041340453.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484519.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..638
                     /product="putative solute carrier family 22 member 31
                     isoform X3"
                     /calculated_mol_wt=67739
     Region          140..574
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(181..182,184..186,189,262,265..266,269,382,385..386,
                     389..391,394,414,418,502..503,507,511,527,530..531,
                     534..535,538)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..638
                     /gene="SLC22A31"
                     /coded_by="XM_041484519.1:229..2145"
                     /db_xref="GeneID:121362731"
ORIGIN      
        1 mtpggvwgwl gepcgrvlrg wrvsralgta gtapsplsph fclwgggspd alqphpsqpc
       61 gqcqgvcqap hadtsplcpr sgtwcvprag rcpwsrprtc wagrwvvspp awlvtgsggp
      121 raapgaggtv snpsqlvpgr fgrrptflls lalavpagla valavdflmv lvarllfgaa
      181 lagaflalyv areceggvrg glgaedapgr pgvwdaagcp gvvwntgcsr vqdarcpwhp
      241 lwpprplpgl elcdpphrlg vtmvagffwi agelllpgla llcrdwrvlq gavtmilall
      301 aaswwcpall lesprwllat rqperarktl qalaedncpq dsllaeleal segpprpryh
      361 svceicstrv iwkngvilgf aafigsgirh cftrnlvphl phffsshlal lgteaaaclf
      421 vcltaerfgr railllctvl tgisslllla ltqckpprdp rhaapaggrk ggcgicpltc
      481 fpppadllel ivltlsvvgt aashavtmls iffasevlpt vvrgaglglv vganfvgkaa
      541 apitaipnsr gfflhhvvfa sfailavlsi mllpesqgrg lpqslqdges qrrpplfrrp
      601 predhlplla phaiphdysc laastkrmlr spepprem
//
LOCUS       XP_041340462             615 aa            linear   VRT 06-MAY-2021
DEFINITION  putative solute carrier family 22 member 31 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340462
VERSION     XP_041340462.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484528.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..615
                     /product="putative solute carrier family 22 member 31
                     isoform X4"
                     /calculated_mol_wt=65261
     Region          140..551
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(181..182,184..186,189,205,208..209,212,359,362..363,
                     366..368,371,391,395,479..480,484,488,504,507..508,
                     511..512,515)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..615
                     /gene="SLC22A31"
                     /coded_by="XM_041484528.1:229..2076"
                     /db_xref="GeneID:121362731"
ORIGIN      
        1 mtpggvwgwl gepcgrvlrg wrvsralgta gtapsplsph fclwgggspd alqphpsqpc
       61 gqcqgvcqap hadtsplcpr sgtwcvprag rcpwsrprtc wagrwvvspp awlvtgsggp
      121 raapgaggtv snpsqlvpgr fgrrptflls lalavpagla valavdflmv lvarllfgaa
      181 lagaflalyv arlelcdpph rlgvtmvagf fwiagelllp glallcrdwr vlqgavtmil
      241 allaaswwcp alllesprwl latrqperar ktlqalaedn cpqdsllaga wgapsaigri
      301 pkallwgwcn ragsiplspv paelealseg pprpryhsvc eicstrviwk ngvilgfaaf
      361 igsgirhcft rnlvphlphf fsshlallgt eaaaclfvcl taerfgrrai lllctvltgi
      421 ssllllaltq ckpprdprha apaggrkggc gicpltcfpp padllelivl tlsvvgtaas
      481 havtmlsiff asevlptvvr gaglglvvga nfvgkaaapi taipnsrgff lhhvvfasfa
      541 ilavlsimll pesqgrglpq slqdgesqrr pplfrrppre dhlpllapha iphdysclaa
      601 stkrmlrspe pprem
//
LOCUS       XP_041340469             606 aa            linear   VRT 06-MAY-2021
DEFINITION  putative solute carrier family 22 member 31 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340469
VERSION     XP_041340469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..606
                     /product="putative solute carrier family 22 member 31
                     isoform X5"
                     /calculated_mol_wt=64576
     Region          140..542
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(181..182,184..186,189,262,265..266,269,382,385..386,
                     389..391,394,414,418,470..471,475,479,495,498..499,
                     502..503,506)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..606
                     /gene="SLC22A31"
                     /coded_by="XM_041484535.1:229..2049"
                     /db_xref="GeneID:121362731"
ORIGIN      
        1 mtpggvwgwl gepcgrvlrg wrvsralgta gtapsplsph fclwgggspd alqphpsqpc
       61 gqcqgvcqap hadtsplcpr sgtwcvprag rcpwsrprtc wagrwvvspp awlvtgsggp
      121 raapgaggtv snpsqlvpgr fgrrptflls lalavpagla valavdflmv lvarllfgaa
      181 lagaflalyv areceggvrg glgaedapgr pgvwdaagcp gvvwntgcsr vqdarcpwhp
      241 lwpprplpgl elcdpphrlg vtmvagffwi agelllpgla llcrdwrvlq gavtmilall
      301 aaswwcpall lesprwllat rqperarktl qalaedncpq dsllaeleal segpprpryh
      361 svceicstrv iwkngvilgf aafigsgirh cftrnlvphl phffsshlal lgteaaaclf
      421 vcltaerfgr railllctvl tgisslllla ltqylleliv ltlsvvgtaa shavtmlsif
      481 fasevlptvv rgaglglvvg anfvgkaaap itaipnsrgf flhhvvfasf ailavlsiml
      541 lpesqgrglp qslqdgesqr rpplfrrppr edhlpllaph aiphdyscla astkrmlrsp
      601 epprem
//
LOCUS       XP_041340474             549 aa            linear   VRT 06-MAY-2021
DEFINITION  putative solute carrier family 22 member 31 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340474
VERSION     XP_041340474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..549
                     /product="putative solute carrier family 22 member 31
                     isoform X6"
                     /calculated_mol_wt=58645
     Region          140..485
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(181..182,184..186,189,205,208..209,212,325,328..329,
                     332..334,337,357,361,413..414,418,422,438,441..442,
                     445..446,449)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..549
                     /gene="SLC22A31"
                     /coded_by="XM_041484540.1:229..1878"
                     /db_xref="GeneID:121362731"
ORIGIN      
        1 mtpggvwgwl gepcgrvlrg wrvsralgta gtapsplsph fclwgggspd alqphpsqpc
       61 gqcqgvcqap hadtsplcpr sgtwcvprag rcpwsrprtc wagrwvvspp awlvtgsggp
      121 raapgaggtv snpsqlvpgr fgrrptflls lalavpagla valavdflmv lvarllfgaa
      181 lagaflalyv arlelcdpph rlgvtmvagf fwiagelllp glallcrdwr vlqgavtmil
      241 allaaswwcp alllesprwl latrqperar ktlqalaedn cpqdsllael ealsegpprp
      301 ryhsvceics trviwkngvi lgfaafigsg irhcftrnlv phlphffssh lallgteaaa
      361 clfvcltaer fgrrailllc tvltgissll llaltqylle livltlsvvg taashavtml
      421 siffasevlp tvvrgaglgl vvganfvgka aapitaipns rgfflhhvvf asfailavls
      481 imllpesqgr glpqslqdge sqrrpplfrr ppredhlpll aphaiphdys claastkrml
      541 rspepprem
//
LOCUS       XP_041340481             504 aa            linear   VRT 06-MAY-2021
DEFINITION  putative solute carrier family 22 member 31 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340481
VERSION     XP_041340481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..504
                     /product="putative solute carrier family 22 member 31
                     isoform X7"
                     /calculated_mol_wt=53832
     Region          <82..440
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..504
                     /gene="SLC22A31"
                     /coded_by="XM_041484547.1:270..1784"
                     /db_xref="GeneID:121362731"
ORIGIN      
        1 mvlvarllfg aalagaflal yvareceggv rgglgaedap grpgvwdaag cpgvvwntgc
       61 srvqdarcpw hplwpprplp glelcdpphr lgvtmvagff wiagelllpg lallcrdwrv
      121 lqgavtmila llaaswwcpa lllesprwll atrqperark tlqalaednc pqdsllagaw
      181 gapsaigrip kallwgwcnr agsiplspvp aelealsegp prpryhsvce icstrviwkn
      241 gvilgfaafi gsgirhcftr nlvphlphff sshlallgte aaaclfvclt aerfgrrail
      301 llctvltgis sllllaltqc kpprdprhaa paggrkggcg icpltcfppp adllelivlt
      361 lsvvgtaash avtmlsiffa sevlptvvrg aglglvvgan fvgkaaapit aipnsrgffl
      421 hhvvfasfai lavlsimllp esqgrglpqs lqdgesqrrp plfrrppred hlpllaphai
      481 phdysclaas tkrmlrspep prem
//
LOCUS       XP_041340494             488 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-2-syntrophin [Pyrgilauda ruficollis].
ACCESSION   XP_041340494
VERSION     XP_041340494.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484560.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..488
                     /product="beta-2-syntrophin"
                     /calculated_mol_wt=52748
     Region          64..146
                     /region_name="PDZ_syntrophin-like"
                     /note="PDZ domain of syntrophins, and related domains;
                     cd06801"
                     /db_xref="CDD:467262"
     Site            order(75..81,93,96,126,130,133..134)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467262"
     Region          <193..250
                     /region_name="PHsplit_syntrophin"
                     /note="Syntrophin Split Pleckstrin homology (PH) domain;
                     cd01258"
                     /db_xref="CDD:269960"
     Region          275..386
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     CDS             1..488
                     /gene="SNTB2"
                     /coded_by="XM_041484560.1:18..1484"
                     /db_xref="GeneID:121362771"
ORIGIN      
        1 mavwtrackt gllelllrer wvrvsaeltg etlsltaepg tgdpsvvngv vngnaeaaap
       61 ggvrrvrvvk aeagglgisi kggrenrmpv lisrifpgla aersgalrlg dailavngvd
      121 lrdathdqav qalkragrev ilevkfmrev tpyikkpslv sdlpwegaap qspslsgsed
      181 sgspqhqgpr drkviplkmc faarnlsmpd lenrlielhs pdsrntlvlr crdtatahaw
      241 fsalhanita llpqvlaeln atlgsgspaa ggrevkhiaw laeqarldgg rqqwrpvlma
      301 vtekdlllyd gmpwtrdawa spchsyplva trlvhsgsgr rspalgselt fatrtgsrqg
      361 vemhvfrvet hrdlsawtrv lvqgchaaae lvkevtvgct lggqevqlsi hyeggftisr
      421 depgssvlfr ypyerlkmsa ddgirtlyld fggpegelal dlhscpkpiv fvlhtflsak
      481 vtrmglla
//
LOCUS       XP_041340509             182 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b-245 light chain [Pyrgilauda ruficollis].
ACCESSION   XP_041340509
VERSION     XP_041340509.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484575.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="cytochrome b-245 light chain"
                     /calculated_mol_wt=19540
     Region          2..182
                     /region_name="Cytochrom_B558a"
                     /note="Cytochrome Cytochrome b558 alpha-subunit;
                     pfam05038"
                     /db_xref="CDD:461532"
     CDS             1..182
                     /gene="LOC121362776"
                     /coded_by="XM_041484575.1:376..924"
                     /db_xref="GeneID:121362776"
ORIGIN      
        1 mgqiewamwa neqalaagli lltggivava gqfkgwyfaa ysiaagvlvc lleyprskrk
       61 kgstmercgq kyltavvkll gpltrnyyir avlhaalavp agfllstilg tvclgiasgi
      121 yllaavrgee wrpieqkpre rpqvggtikq ppsnppprpp pdarkkqpev ggqvnpipve
      181 ve
//
LOCUS       XP_041340518             182 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b-245 light chain [Pyrgilauda ruficollis].
ACCESSION   XP_041340518
VERSION     XP_041340518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="cytochrome b-245 light chain"
                     /calculated_mol_wt=19540
     Region          2..182
                     /region_name="Cytochrom_B558a"
                     /note="Cytochrome Cytochrome b558 alpha-subunit;
                     pfam05038"
                     /db_xref="CDD:461532"
     CDS             1..182
                     /gene="LOC121362776"
                     /coded_by="XM_041484584.1:336..884"
                     /db_xref="GeneID:121362776"
ORIGIN      
        1 mgqiewamwa neqalaagli lltggivava gqfkgwyfaa ysiaagvlvc lleyprskrk
       61 kgstmercgq kyltavvkll gpltrnyyir avlhaalavp agfllstilg tvclgiasgi
      121 yllaavrgee wrpieqkpre rpqvggtikq ppsnppprpp pdarkkqpev ggqvnpipve
      181 ve
//
LOCUS       XP_041340532             331 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: sulfotransferase 2B1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340532
VERSION     XP_041340532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484598.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="LOW QUALITY PROTEIN: sulfotransferase 2B1-like"
                     /calculated_mol_wt=37194
     Region          78..322
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..331
                     /gene="LOC121362782"
                     /coded_by="XM_041484598.1:16..1011"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121362782"
ORIGIN      
        1 maparipgsp agmcrgvppp arrgrflfqr ylsgsgrvpp gramermevt etfagialpg
       61 hlhtqeslgf aaaftfrptd vliatypksg ttwmqeiltl lfslgdarpa ktipnwerap
      121 wleqiycrea lrdtetprll tthlpapvla palqrsrakv iyvarnpkdv avsfyhfhhl
      181 akflpdpssf dafltqfleg tvhygswfdh vkgwlgqrhl ldilyvtyee lhqdlrgtaq
      241 rlssflgcpl apgtlaaleq hcsfsamrdn amanyslipa eimdhsqgrf mrkgvvgdwr
      301 shfspeqnal fnrryqeemg dtelpsqwpm a
//
LOCUS       XP_041340544             416 aa            linear   VRT 06-MAY-2021
DEFINITION  dipeptidase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340544
VERSION     XP_041340544.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484610.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="dipeptidase 1"
                     /calculated_mol_wt=45218
     Region          29..353
                     /region_name="Peptidase_M19"
                     /note="Membrane dipeptidase (Peptidase family M19);
                     pfam01244"
                     /db_xref="CDD:395996"
     Site            order(39,41,87,144,217,238,249,307,310)
                     /site_type="active"
                     /db_xref="CDD:238626"
     Site            order(89,98..100,102..103,106,110,154..155,157..158,
                     161..162)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238626"
     CDS             1..416
                     /gene="DPEP1"
                     /coded_by="XM_041484610.1:569..1819"
                     /db_xref="GeneID:121362789"
ORIGIN      
        1 mpggsvwalv lalalpstgq qhleeaerim rttpvidghn dlpwqllqkf nnqlrlpaan
       61 ltvlndthtn ipklrqghvg gqfwsvyvpc etqnkdavrr tleqmdvvqr mcdmypetft
      121 cvtdssgvre afrngkvasl igvegghsid sslgvlrtly rlgarymtlt hscntpwadn
      181 wlvdtndenp vhhglspfgk mvveemnrlg mivdlahvsv dtmkvvlnis kapvifshss
      241 afslcqhrrn vpddvlqlva stgslvmvnf ynayvtcsdk aklsdvadhl dyvkkvagaq
      301 avgfggdydg vpgvptgled vskypalvae llarnwteee vkgalaenll rvfsrveevk
      361 rslqgmaphe tpiafeeleg pcrtsygysn gagtargppa alalalalap llavls
//
LOCUS       XP_041340552             416 aa            linear   VRT 06-MAY-2021
DEFINITION  dipeptidase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340552
VERSION     XP_041340552.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484618.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="dipeptidase 1"
                     /calculated_mol_wt=45218
     Region          29..353
                     /region_name="Peptidase_M19"
                     /note="Membrane dipeptidase (Peptidase family M19);
                     pfam01244"
                     /db_xref="CDD:395996"
     Site            order(39,41,87,144,217,238,249,307,310)
                     /site_type="active"
                     /db_xref="CDD:238626"
     Site            order(89,98..100,102..103,106,110,154..155,157..158,
                     161..162)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238626"
     CDS             1..416
                     /gene="DPEP1"
                     /coded_by="XM_041484618.1:51..1301"
                     /db_xref="GeneID:121362789"
ORIGIN      
        1 mpggsvwalv lalalpstgq qhleeaerim rttpvidghn dlpwqllqkf nnqlrlpaan
       61 ltvlndthtn ipklrqghvg gqfwsvyvpc etqnkdavrr tleqmdvvqr mcdmypetft
      121 cvtdssgvre afrngkvasl igvegghsid sslgvlrtly rlgarymtlt hscntpwadn
      181 wlvdtndenp vhhglspfgk mvveemnrlg mivdlahvsv dtmkvvlnis kapvifshss
      241 afslcqhrrn vpddvlqlva stgslvmvnf ynayvtcsdk aklsdvadhl dyvkkvagaq
      301 avgfggdydg vpgvptgled vskypalvae llarnwteee vkgalaenll rvfsrveevk
      361 rslqgmaphe tpiafeeleg pcrtsygysn gagtargppa alalalalap llavls
//
LOCUS       XP_041340563             686 aa            linear   VRT 06-MAY-2021
DEFINITION  U3 small nucleolar RNA-associated protein 4 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340563
VERSION     XP_041340563.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484629.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..686
                     /product="U3 small nucleolar RNA-associated protein 4
                     homolog"
                     /calculated_mol_wt=75822
     Region          <7..305
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          20..57
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          63..98
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          104..143
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          145..550
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          149..186
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(162,166,171..172,185..186,210,214,220..221,233..234,
                     252,257,270..271,285,301,323,357..358,388..389,453,457,
                     463..464,482..483,500,505,511..512,524..525,543,547)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          191..229
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          239..281
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..317
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          372..418
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          426..478
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          487..521
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          529..553
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..686
                     /gene="UTP4"
                     /coded_by="XM_041484629.1:77..2137"
                     /db_xref="GeneID:121362805"
ORIGIN      
        1 mgefqvhrvr ffglvpagvr clacqprgar lalartdgav evynlaanyf qekvipghea
       61 rsveslcwaa gdrlfgaglg gditefdlsg lsaargvdgg ggpiwsmvan gtgtqlaigc
      121 edgsvkifqv vpggiqfern ldrrkgrvlc lswhpsdthi vagsidffrv idvtsgqtvq
      181 rimvnhhvek akrecvvwav allssgtvvs adsfgrvqfw dweqgalaes havstsavls
      241 lavsekedsi ivgtstgaty qlqllpvrlg glekrwvrtk pfqfhshdvr avahsptali
      301 sggldaqlvi rplmekmqkk sydavlrkft fphrrlvsca rkarlllfqf sqylelwrlg
      361 steetgkdge vlplcrmpeh lvqlkskgpe hiycscvspc gtwvgystas rfqlyrvrcd
      421 gdgvslrkvp kvpkvlppay qlqfsadsdc lfvasargsv hvfqllepgg ckhlhtlrpp
      481 sgcseavyll apsadghwla avsgdwaihi ynlkcfkhhc vvptyncavs alaihpstnn
      541 lviaysdqql lefsipekqy tswsravqsr glhrawlerd spithitfnp knpshillhd
      601 tyllcvldks lplpddsall mnqstlkqlp etarkrqlha fkickkfqpl lfmdlldknc
      661 lvvverpimd fktqlplpvq qkkfgt
//
LOCUS       XP_041340577             475 aa            linear   VRT 06-MAY-2021
DEFINITION  differentially expressed in FDCP 8 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340577
VERSION     XP_041340577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484643.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="differentially expressed in FDCP 8 homolog
                     isoform X1"
                     /calculated_mol_wt=53769
     Region          132..192
                     /region_name="C1_DEF8"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in differentially expressed in FDCP 8 (DEF-8) and
                     similar proteins; cd20819"
                     /db_xref="CDD:410369"
     Region          232..458
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..475
                     /gene="DEF8"
                     /coded_by="XM_041484643.1:33..1460"
                     /db_xref="GeneID:121362809"
ORIGIN      
        1 mrgrcrtvam asderlarfr qahlnpfnks peqperpdga spapaqqpdp tpgdpegald
       61 lglaedhfsr pvglilasdv pqlrraieec krvilalpeh serqkdavvr lihlrlklqe
      121 lkdpgedepn irvvlehrfy keksksvkqm cdkcstiiwg liqtwytctg cyyrchskcl
      181 plvsrpcvra qvshqaeyql sicpesglds qdyrcaecra pislrgvpse arqcdytgly
      241 ycsschwndl avvparaihn wdfeprkvsr csmrylalmv srpvlklrei npllfnyvee
      301 lveirklrqd illmkpyfit ckeamearll lqlqdrqhfv endemyslqd lidieagrlg
      361 cslteihtlf akhikldcer cqakgfvcel cregdvlfpf dshtsvcadc savfhryrha
      421 gagggdggva gsdptlspsl srdcyydnst tcprcarlsl rkqslfqdsg teaep
//
LOCUS       XP_041340587             450 aa            linear   VRT 06-MAY-2021
DEFINITION  differentially expressed in FDCP 8 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340587
VERSION     XP_041340587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="differentially expressed in FDCP 8 homolog
                     isoform X2"
                     /calculated_mol_wt=51500
     Region          133..193
                     /region_name="C1_DEF8"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in differentially expressed in FDCP 8 (DEF-8) and
                     similar proteins; cd20819"
                     /db_xref="CDD:410369"
     Region          233..433
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..450
                     /gene="DEF8"
                     /coded_by="XM_041484653.1:2..1354"
                     /db_xref="GeneID:121362809"
ORIGIN      
        1 mrgrcrrtva masderlarf rqahlnpfnk speqperpdg aspapaqqpd ptpgdpegal
       61 dlglaedhfs rpvglilasd vpqlrraiee ckrvilalpe hserqkdavv rlihlrlklq
      121 elkdpgedep nirvvlehrf ykeksksvkq mcdkcstiiw gliqtwytct gcyyrchskc
      181 lplvsrpcvr aqvshqaeyq lsicpesgld sqdyrcaecr apislrgvps earqcdytgl
      241 yycsschwnd lavvparaih nwdfeprkvs rcsmrylalm vsrpvlklre inpllfnyve
      301 elveirklrq dillmkpyfi tckeamearl llqlqdrqhf vendemyslq dlidieagrl
      361 gcslteihtl fakhikldce rcqakgfvce lcregdvlfp fdshtsvcad csavfhrdcy
      421 ydnsttcprc arlslrkqsl fqdsgteaep
//
LOCUS       XP_041340596             449 aa            linear   VRT 06-MAY-2021
DEFINITION  differentially expressed in FDCP 8 homolog isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340596
VERSION     XP_041340596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..449
                     /product="differentially expressed in FDCP 8 homolog
                     isoform X3"
                     /calculated_mol_wt=51344
     Region          132..192
                     /region_name="C1_DEF8"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in differentially expressed in FDCP 8 (DEF-8) and
                     similar proteins; cd20819"
                     /db_xref="CDD:410369"
     Region          232..432
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..449
                     /gene="DEF8"
                     /coded_by="XM_041484662.1:28..1377"
                     /db_xref="GeneID:121362809"
ORIGIN      
        1 mrgrcrtvam asderlarfr qahlnpfnks peqperpdga spapaqqpdp tpgdpegald
       61 lglaedhfsr pvglilasdv pqlrraieec krvilalpeh serqkdavvr lihlrlklqe
      121 lkdpgedepn irvvlehrfy keksksvkqm cdkcstiiwg liqtwytctg cyyrchskcl
      181 plvsrpcvra qvshqaeyql sicpesglds qdyrcaecra pislrgvpse arqcdytgly
      241 ycsschwndl avvparaihn wdfeprkvsr csmrylalmv srpvlklrei npllfnyvee
      301 lveirklrqd illmkpyfit ckeamearll lqlqdrqhfv endemyslqd lidieagrlg
      361 cslteihtlf akhikldcer cqakgfvcel cregdvlfpf dshtsvcadc savfhrdcyy
      421 dnsttcprca rlslrkqslf qdsgteaep
//
LOCUS       XP_041340604             440 aa            linear   VRT 06-MAY-2021
DEFINITION  differentially expressed in FDCP 8 homolog isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340604
VERSION     XP_041340604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="differentially expressed in FDCP 8 homolog
                     isoform X4"
                     /calculated_mol_wt=50506
     Region          123..183
                     /region_name="C1_DEF8"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in differentially expressed in FDCP 8 (DEF-8) and
                     similar proteins; cd20819"
                     /db_xref="CDD:410369"
     Region          223..423
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..440
                     /gene="DEF8"
                     /coded_by="XM_041484670.1:3..1325"
                     /db_xref="GeneID:121362809"
ORIGIN      
        1 mrgrcrrtva masderlarf rqahlnpfnk speqperpdg aspapaqqpd ptpgdpegal
       61 dlglaedhfs rpvlrraiee ckrvilalpe hserqkdavv rlihlrlklq elkdpgedep
      121 nirvvlehrf ykeksksvkq mcdkcstiiw gliqtwytct gcyyrchskc lplvsrpcvr
      181 aqvshqaeyq lsicpesgld sqdyrcaecr apislrgvps earqcdytgl yycsschwnd
      241 lavvparaih nwdfeprkvs rcsmrylalm vsrpvlklre inpllfnyve elveirklrq
      301 dillmkpyfi tckeamearl llqlqdrqhf vendemyslq dlidieagrl gcslteihtl
      361 fakhikldce rcqakgfvce lcregdvlfp fdshtsvcad csavfhrdcy ydnsttcprc
      421 arlslrkqsl fqdsgteaep
//
LOCUS       XP_041340612             440 aa            linear   VRT 06-MAY-2021
DEFINITION  differentially expressed in FDCP 8 homolog isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340612
VERSION     XP_041340612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="differentially expressed in FDCP 8 homolog
                     isoform X5"
                     /calculated_mol_wt=50313
     Region          123..183
                     /region_name="C1_DEF8"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in differentially expressed in FDCP 8 (DEF-8) and
                     similar proteins; cd20819"
                     /db_xref="CDD:410369"
     Region          223..423
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..440
                     /gene="DEF8"
                     /coded_by="XM_041484678.1:136..1458"
                     /db_xref="GeneID:121362809"
ORIGIN      
        1 masderlarf rqahlnpfnk speqperpdg aspapaqqpd ptpgdpegal dlglaedhfs
       61 rpvglilasd vpqlrraiee ckrvilalpe hserqkdavv rlihlrlklq elkdpgedep
      121 nirvvlehrf ykeksksvkq mcdkcstiiw gliqtwytct gcyyrchskc lplvsrpcvr
      181 aqvshqaeyq lsicpesgld sqdyrcaecr apislrgvps earqcdytgl yycsschwnd
      241 lavvparaih nwdfeprkvs rcsmrylalm vsrpvlklre inpllfnyve elveirklrq
      301 dillmkpyfi tckeamearl llqlqdrqhf vendemyslq dlidieagrl gcslteihtl
      361 fakhikldce rcqakgfvce lcregdvlfp fdshtsvcad csavfhrdcy ydnsttcprc
      421 arlslrkqsl fqdsgteaep
//
LOCUS       XP_041340621             440 aa            linear   VRT 06-MAY-2021
DEFINITION  differentially expressed in FDCP 8 homolog isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340621
VERSION     XP_041340621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="differentially expressed in FDCP 8 homolog
                     isoform X5"
                     /calculated_mol_wt=50313
     Region          123..183
                     /region_name="C1_DEF8"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in differentially expressed in FDCP 8 (DEF-8) and
                     similar proteins; cd20819"
                     /db_xref="CDD:410369"
     Region          223..423
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..440
                     /gene="DEF8"
                     /coded_by="XM_041484687.1:141..1463"
                     /db_xref="GeneID:121362809"
ORIGIN      
        1 masderlarf rqahlnpfnk speqperpdg aspapaqqpd ptpgdpegal dlglaedhfs
       61 rpvglilasd vpqlrraiee ckrvilalpe hserqkdavv rlihlrlklq elkdpgedep
      121 nirvvlehrf ykeksksvkq mcdkcstiiw gliqtwytct gcyyrchskc lplvsrpcvr
      181 aqvshqaeyq lsicpesgld sqdyrcaecr apislrgvps earqcdytgl yycsschwnd
      241 lavvparaih nwdfeprkvs rcsmrylalm vsrpvlklre inpllfnyve elveirklrq
      301 dillmkpyfi tckeamearl llqlqdrqhf vendemyslq dlidieagrl gcslteihtl
      361 fakhikldce rcqakgfvce lcregdvlfp fdshtsvcad csavfhrdcy ydnsttcprc
      421 arlslrkqsl fqdsgteaep
//
LOCUS       XP_041340635             623 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA replication factor Cdt1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340635
VERSION     XP_041340635.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484701.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="DNA replication factor Cdt1"
                     /calculated_mol_wt=67498
     Site            order(249..251,253..254,257..260,263,279,309,370..372,375,
                     378,397,406,410..417)
                     /site_type="active"
                     /note="Cdt1-Geminin inhibitory interaction site [active]"
                     /db_xref="CDD:176571"
     Site            order(250..251,253..254,257..260,262,406,410..417,419)
                     /site_type="active"
                     /note="Cdt1-Geminin permissive interaction site [active]"
                     /db_xref="CDD:176571"
     Region          267..432
                     /region_name="CDT1"
                     /note="DNA replication factor CDT1 like; pfam08839"
                     /db_xref="CDD:462618"
     Region          492..614
                     /region_name="Cdt1_c"
                     /note="The C-terminal fold of replication licensing factor
                     Cdt1 is essential for Cdt1 activity and directly interacts
                     with MCM2-7 helicase; cd08767"
                     /db_xref="CDD:176572"
     Site            order(506,510,546..547,551,573,577,581,588,590,593,611,
                     614)
                     /site_type="active"
                     /note="putative Cdt1-MCM complex binding site [active]"
                     /db_xref="CDD:176572"
     CDS             1..623
                     /gene="CDT1"
                     /coded_by="XM_041484701.1:122..1993"
                     /db_xref="GeneID:121362833"
ORIGIN      
        1 maqlrltdff sqtkattgap akrsggrllk aglaarpvhr qeedgvpagl ggrslplpgs
       61 prtparggsp alrglagrkr srremeagsp vgarlrepsg ksarkrlelp rdaepgspga
      121 atsssplatp rpptplsqdp avsppasssg spgrgqdtgt epgpaapgpa rrlqredvae
      181 lqgrlqrmkv lgqvprvpsg tssdlrsrle rvrqleqrvr qrraasgdtg dsgdpgvaap
      241 gaetgqkppa yqrfhtlaqe lppgltlpyk frvlaemfrs vdtitgmlfn raetvtfakv
      301 kqgvqdmmrr qfeeqhlgqi kavypssyrl rqeknvptfg sggkkkseyq ltlepvlgee
      361 ekvdgrphls asrllerrre fhrnlvnivr ehhkaflaal sppmvvpeek ltrwhprfnv
      421 devpdispae lprppqedrl staqevlsta rgmlspkmek alanlalrta easagepals
      481 qapapasass alrgvsqgll ervrakearr laalltrdar qeeraarlar lpamarllrg
      541 vfvaekkpal gmellcarla dscpelvapg emekhvrlfa ellpdwvgvh alrtdtyvkl
      601 dkekdlglvt erlnkaakea gal
//
LOCUS       XP_041340649             350 aa            linear   VRT 06-MAY-2021
DEFINITION  embryonic polyadenylate-binding protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340649
VERSION     XP_041340649.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484715.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="embryonic polyadenylate-binding protein 2
                     isoform X1"
                     /calculated_mol_wt=38255
     Region          185..256
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..350
                     /gene="PABPN1L"
                     /coded_by="XM_041484715.1:776..1828"
                     /db_xref="GeneID:121362838"
ORIGIN      
        1 mpcqplpggg calagtlngc wfnallplvl psplfldtse iwwqdppslq aeaapwdvte
       61 vaavckaade gsdpspqegn steeqdvqdp vsacldgwga sfpwcpkemg tflhlgcpcs
      121 vccscnswfg iqeleaikak lreieqeder lkelqleaen hlfmsseaal fplttkekme
      181 adqrsiyvgn vdyggtaeel eshfnscgqi nrvtilcdkf sghpkgyayi efeeqssvka
      241 aveldesvfr grvikvragg apggllppfp alpawgwakp hlqqplptpq vlpkrtnmpg
      301 isstdrggyr gcchargalg rwggpygqqp rlrgrayrgr arllpwyfpy
//
LOCUS       XP_041340655             315 aa            linear   VRT 06-MAY-2021
DEFINITION  embryonic polyadenylate-binding protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340655
VERSION     XP_041340655.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484721.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="embryonic polyadenylate-binding protein 2
                     isoform X2"
                     /calculated_mol_wt=34648
     Region          185..261
                     /region_name="RRM_II_PABPN1L"
                     /note="RNA recognition motif in vertebrate type II
                     embryonic polyadenylate-binding protein 2 (ePABP-2);
                     cd12551"
                     /db_xref="CDD:409967"
     Site            order(187,193..194,196..198,201,210..220,227,229,257,260)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409967"
     CDS             1..315
                     /gene="PABPN1L"
                     /coded_by="XM_041484721.1:776..1723"
                     /db_xref="GeneID:121362838"
ORIGIN      
        1 mpcqplpggg calagtlngc wfnallplvl psplfldtse iwwqdppslq aeaapwdvte
       61 vaavckaade gsdpspqegn steeqdvqdp vsacldgwga sfpwcpkemg tflhlgcpcs
      121 vccscnswfg iqeleaikak lreieqeder lkelqleaen hlfmsseaal fplttkekme
      181 adqrsiyvgn vdyggtaeel eshfnscgqi nrvtilcdkf sghpkgyayi efeeqssvka
      241 aveldesvfr grvikvlpkr tnmpgisstd rggyrgccha rgalgrwggp ygqqprlrgr
      301 ayrgrarllp wyfpy
//
LOCUS       XP_041340669            1351 aa            linear   VRT 06-MAY-2021
DEFINITION  PH domain leucine-rich repeat-containing protein phosphatase 2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340669
VERSION     XP_041340669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1351
                     /product="PH domain leucine-rich repeat-containing protein
                     phosphatase 2 isoform X1"
                     /calculated_mol_wt=148167
     Region          80..177
                     /region_name="RA_PHLPP2"
                     /note="Ras-associating (RA) domain found in PH domain
                     leucine-rich repeat-containing protein phosphatase 2
                     (PHLPP2); cd17241"
                     /db_xref="CDD:340761"
     Region          184..278
                     /region_name="PH_PHLPP-like"
                     /note="PH domain leucine-rich repeat protein phosphatase
                     family Pleckstrin homology-like domain; cd13322"
                     /db_xref="CDD:270131"
     Region          290..631
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          309..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..404
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          405..427
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          428..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          497..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <527..>794
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          539..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          607..630
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          631..656
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          657..680
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..704
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          705..727
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          750..772
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          819..1066
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(830,834..835,855..857,1018,1057)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..1351
                     /gene="PHLPP2"
                     /coded_by="XM_041484735.1:3452..7507"
                     /db_xref="GeneID:121362851"
ORIGIN      
        1 mgeagpgagp gaalgpreaq epeedeaaap ggtrgcrags rggirvlkrn akrtgsrscq
       61 srsrvgsrer twlkgdvgrg cvyvygrdsa aaapsdlrlv lctvdtqase icdgegrktl
      121 flqlhgdlvr rleptekplq ivydylaglg fddplrmqee aansdlscmi rfysekpcqv
      181 eqldrillsg vynvrkgktq lhkwaersvt lcgtclivss vkdshagkmh ilpliggkve
      241 emkrrqytla ftsagaqaqt yhvsfetlae cqrwhrqast ivsmrfsmvd lscysleevp
      301 ehlfysqdit ylnlrhnfmr tsgagsldsl crfsqlksln lshnrlgefp vslceistlt
      361 elniscnglh ylpsqigkll nlqtfwldgn fltslpeemg nlqqlsclgl sfnnfcelpa
      421 iceklvtldk lalagnllet ldltvlnrmg hiksvdlrln nlkraaadtl egnksvaymd
      481 lrdnqmtdld lsslvsleql hcernklrel tlsgfslral yansncltav niypvpgllt
      541 clelshnqlq cvpdwaceak klevldvsyn lllelpsril rslslrklmv ghnrlqslpp
      601 llehiplevl dlqhnllakl petlfvkaln lrylnasans leslpttcpg eeslsmlqll
      661 yltnnnltdq cipvlvghpn lrilhlannn lqtfpaskls klehleelnl sgnklktipt
      721 tvanckllht liahsneisi fpevlhlpri qfvdlscnel teilipealp galqeldlsg
      781 ntnlvlehkt ldifshittl kidakpslta dsaltsvfws hgvaemagqr nklcvssltl
      841 gsfaegveav ygmfdgdkne elprllqctm advlleevqq sdtmfmsntf lvshrklgma
      901 gqklgssavl cyirnevadp asnfsltvan vgtcqavlcr sgkalplskv fsleqcseea
      961 rrvkeqkaii tednkvngvt cctrmlgcty lhpwilpkph vssipltvqd ellllgnkal
     1021 wehlsyaeav savrhlhdpl aaakklctla qsygcqdnvg amvvclnise dnctcemhgl
     1081 tltgpggfss tttkpatpsc ssgiasefss elsasevsse vgstasdehs avgldgsllp
     1141 rqerrcslhp vppssifqrq hssatfssnq sdngldsdde qpvegvmtng skvevevdih
     1201 cckgkglelq hpaaeyssst pgpeddsglv liirrqnsvn sntvqrgvke kcelqkslst
     1261 cclygkklsn gsivpleesl nlievateap kkktgyfaap sqmepedqfv vppdleeevk
     1321 eqmkqhqedr adqelkeeha aslpeefdta l
//
LOCUS       XP_041340678            1302 aa            linear   VRT 06-MAY-2021
DEFINITION  PH domain leucine-rich repeat-containing protein phosphatase 2
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340678
VERSION     XP_041340678.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484744.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1302
                     /product="PH domain leucine-rich repeat-containing protein
                     phosphatase 2 isoform X2"
                     /calculated_mol_wt=142672
     Region          80..177
                     /region_name="RA_PHLPP2"
                     /note="Ras-associating (RA) domain found in PH domain
                     leucine-rich repeat-containing protein phosphatase 2
                     (PHLPP2); cd17241"
                     /db_xref="CDD:340761"
     Region          184..278
                     /region_name="PH_PHLPP-like"
                     /note="PH domain leucine-rich repeat protein phosphatase
                     family Pleckstrin homology-like domain; cd13322"
                     /db_xref="CDD:270131"
     Region          288..481
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          289..308
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Site            order(292..293,339,386,410,455,472,474)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          309..332
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          333..355
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          356..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          379..402
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          403..426
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          410..765
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          448..480
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          490..512
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          513..535
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          536..551
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          558..581
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          582..607
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          608..631
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          632..655
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          656..678
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          701..723
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          770..1017
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(781,785..786,806..808,969,1008)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..1302
                     /gene="PHLPP2"
                     /coded_by="XM_041484744.1:3452..7360"
                     /db_xref="GeneID:121362851"
ORIGIN      
        1 mgeagpgagp gaalgpreaq epeedeaaap ggtrgcrags rggirvlkrn akrtgsrscq
       61 srsrvgsrer twlkgdvgrg cvyvygrdsa aaapsdlrlv lctvdtqase icdgegrktl
      121 flqlhgdlvr rleptekplq ivydylaglg fddplrmqee aansdlscmi rfysekpcqv
      181 eqldrillsg vynvrkgktq lhkwaersvt lcgtclivss vkdshagkmh ilpliggkve
      241 emkrrqytla ftsagaqaqt yhvsfetlae cqrwhrqast ivsmrfsmvd lscysleevp
      301 ehlfysqdit ylnlrhnfmr tsgagsldsl cslqtfwldg nfltslpeem gnlqqlsclg
      361 lsfnnfcelp aiceklvtld klalagnlle tldltvlnrm ghiksvdlrl nnlkraaadt
      421 legnksvaym dlrdnqmtdl dlsslvsleq lhcernklre ltlsgfslra lyansnclta
      481 vniypvpgll tclelshnql qcvpdwacea kklevldvsy nlllelpsri lrslslrklm
      541 vghnrlqslp pllehiplev ldlqhnllak lpetlfvkal nlrylnasan sleslpttcp
      601 geeslsmlql lyltnnnltd qcipvlvghp nlrilhlann nlqtfpaskl sklehleeln
      661 lsgnklktip ttvanckllh tliahsneis ifpevlhlpr iqfvdlscne lteilipeal
      721 pgalqeldls gntnlvlehk tldifshitt lkidakpslt adsaltsvfw shgvaemagq
      781 rnklcvsslt lgsfaegvea vygmfdgdkn eelprllqct madvlleevq qsdtmfmsnt
      841 flvshrklgm agqklgssav lcyirnevad pasnfsltva nvgtcqavlc rsgkalplsk
      901 vfsleqcsee arrvkeqkai itednkvngv tcctrmlgct ylhpwilpkp hvssipltvq
      961 dellllgnka lwehlsyaea vsavrhlhdp laaakklctl aqsygcqdnv gamvvclnis
     1021 ednctcemhg ltltgpggfs stttkpatps cssgiasefs selsasevss evgstasdeh
     1081 savgldgsll prqerrcslh pvppssifqr qhssatfssn qsdngldsdd eqpvegvmtn
     1141 gskvevevdi hcckgkglel qhpaaeysss tpgpeddsgl vliirrqnsv nsntvqrgvk
     1201 ekcelqksls tcclygkkls ngsivplees lnlievatea pkkktgyfaa psqmepedqf
     1261 vvppdleeev keqmkqhqed radqelkeeh aaslpeefdt al
//
LOCUS       XP_041340686            1082 aa            linear   VRT 06-MAY-2021
DEFINITION  PH domain leucine-rich repeat-containing protein phosphatase 2
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041340686
VERSION     XP_041340686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1082
                     /product="PH domain leucine-rich repeat-containing protein
                     phosphatase 2 isoform X3"
                     /calculated_mol_wt=118864
     Region          21..362
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          40..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          136..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          228..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <258..>525
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          270..292
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          293..315
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          316..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          338..361
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          362..387
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          388..411
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          412..435
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          436..458
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          481..503
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          550..797
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(561,565..566,586..588,749,788)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..1082
                     /gene="PHLPP2"
                     /coded_by="XM_041484752.1:902..4150"
                     /db_xref="GeneID:121362851"
ORIGIN      
        1 mdshflygly pivsmrfsmv dlscysleev pehlfysqdi tylnlrhnfm rtsgagslds
       61 lcrfsqlksl nlshnrlgef pvslceistl telniscngl hylpsqigkl lnlqtfwldg
      121 nfltslpeem gnlqqlsclg lsfnnfcelp aiceklvtld klalagnlle tldltvlnrm
      181 ghiksvdlrl nnlkraaadt legnksvaym dlrdnqmtdl dlsslvsleq lhcernklre
      241 ltlsgfslra lyansnclta vniypvpgll tclelshnql qcvpdwacea kklevldvsy
      301 nlllelpsri lrslslrklm vghnrlqslp pllehiplev ldlqhnllak lpetlfvkal
      361 nlrylnasan sleslpttcp geeslsmlql lyltnnnltd qcipvlvghp nlrilhlann
      421 nlqtfpaskl sklehleeln lsgnklktip ttvanckllh tliahsneis ifpevlhlpr
      481 iqfvdlscne lteilipeal pgalqeldls gntnlvlehk tldifshitt lkidakpslt
      541 adsaltsvfw shgvaemagq rnklcvsslt lgsfaegvea vygmfdgdkn eelprllqct
      601 madvlleevq qsdtmfmsnt flvshrklgm agqklgssav lcyirnevad pasnfsltva
      661 nvgtcqavlc rsgkalplsk vfsleqcsee arrvkeqkai itednkvngv tcctrmlgct
      721 ylhpwilpkp hvssipltvq dellllgnka lwehlsyaea vsavrhlhdp laaakklctl
      781 aqsygcqdnv gamvvclnis ednctcemhg ltltgpggfs stttkpatps cssgiasefs
      841 selsasevss evgstasdeh savgldgsll prqerrcslh pvppssifqr qhssatfssn
      901 qsdngldsdd eqpvegvmtn gskvevevdi hcckgkglel qhpaaeysss tpgpeddsgl
      961 vliirrqnsv nsntvqrgvk ekcelqksls tcclygkkls ngsivplees lnlievatea
     1021 pkkktgyfaa psqmepedqf vvppdleeev keqmkqhqed radqelkeeh aaslpeefdt
     1081 al
//
LOCUS       XP_041340696             896 aa            linear   VRT 06-MAY-2021
DEFINITION  PH domain leucine-rich repeat-containing protein phosphatase 2
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041340696
VERSION     XP_041340696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="PH domain leucine-rich repeat-containing protein
                     phosphatase 2 isoform X4"
                     /calculated_mol_wt=98945
     Region          80..177
                     /region_name="RA_PHLPP2"
                     /note="Ras-associating (RA) domain found in PH domain
                     leucine-rich repeat-containing protein phosphatase 2
                     (PHLPP2); cd17241"
                     /db_xref="CDD:340761"
     Region          184..278
                     /region_name="PH_PHLPP-like"
                     /note="PH domain leucine-rich repeat protein phosphatase
                     family Pleckstrin homology-like domain; cd13322"
                     /db_xref="CDD:270131"
     Region          290..631
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          309..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..404
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          405..427
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          428..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          497..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <527..>794
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          539..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          607..630
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          631..656
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          657..680
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..704
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          705..727
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          750..772
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..896
                     /gene="PHLPP2"
                     /coded_by="XM_041484762.1:3452..6142"
                     /db_xref="GeneID:121362851"
ORIGIN      
        1 mgeagpgagp gaalgpreaq epeedeaaap ggtrgcrags rggirvlkrn akrtgsrscq
       61 srsrvgsrer twlkgdvgrg cvyvygrdsa aaapsdlrlv lctvdtqase icdgegrktl
      121 flqlhgdlvr rleptekplq ivydylaglg fddplrmqee aansdlscmi rfysekpcqv
      181 eqldrillsg vynvrkgktq lhkwaersvt lcgtclivss vkdshagkmh ilpliggkve
      241 emkrrqytla ftsagaqaqt yhvsfetlae cqrwhrqast ivsmrfsmvd lscysleevp
      301 ehlfysqdit ylnlrhnfmr tsgagsldsl crfsqlksln lshnrlgefp vslceistlt
      361 elniscnglh ylpsqigkll nlqtfwldgn fltslpeemg nlqqlsclgl sfnnfcelpa
      421 iceklvtldk lalagnllet ldltvlnrmg hiksvdlrln nlkraaadtl egnksvaymd
      481 lrdnqmtdld lsslvsleql hcernklrel tlsgfslral yansncltav niypvpgllt
      541 clelshnqlq cvpdwaceak klevldvsyn lllelpsril rslslrklmv ghnrlqslpp
      601 llehiplevl dlqhnllakl petlfvkaln lrylnasans leslpttcpg eeslsmlqll
      661 yltnnnltdq cipvlvghpn lrilhlannn lqtfpaskls klehleelnl sgnklktipt
      721 tvanckllht liahsneisi fpevlhlpri qfvdlscnel teilipealp galqeldlsg
      781 ntnlvlehkt ldifshittl kidakpslta dsaltsvfws hgvaemagqr nklcvssltl
      841 gsfaegveav ygmfdgdkne elprllqctm advlleekag hgwaeagflc cpllhs
//
LOCUS       XP_041340705             895 aa            linear   VRT 06-MAY-2021
DEFINITION  PH domain leucine-rich repeat-containing protein phosphatase 2
            isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041340705
VERSION     XP_041340705.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484771.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..895
                     /product="PH domain leucine-rich repeat-containing protein
                     phosphatase 2 isoform X5"
                     /calculated_mol_wt=99076
     Region          80..177
                     /region_name="RA_PHLPP2"
                     /note="Ras-associating (RA) domain found in PH domain
                     leucine-rich repeat-containing protein phosphatase 2
                     (PHLPP2); cd17241"
                     /db_xref="CDD:340761"
     Region          184..278
                     /region_name="PH_PHLPP-like"
                     /note="PH domain leucine-rich repeat protein phosphatase
                     family Pleckstrin homology-like domain; cd13322"
                     /db_xref="CDD:270131"
     Region          290..631
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          309..335
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..358
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          359..381
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          382..404
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          405..427
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          428..451
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          452..475
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          497..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <527..>794
                     /region_name="PRK15370"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP"
                     /db_xref="CDD:185268"
     Region          539..561
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          562..584
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          585..600
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          607..630
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          631..656
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          657..680
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          681..704
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          705..727
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          750..772
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..895
                     /gene="PHLPP2"
                     /coded_by="XM_041484771.1:3452..6139"
                     /db_xref="GeneID:121362851"
ORIGIN      
        1 mgeagpgagp gaalgpreaq epeedeaaap ggtrgcrags rggirvlkrn akrtgsrscq
       61 srsrvgsrer twlkgdvgrg cvyvygrdsa aaapsdlrlv lctvdtqase icdgegrktl
      121 flqlhgdlvr rleptekplq ivydylaglg fddplrmqee aansdlscmi rfysekpcqv
      181 eqldrillsg vynvrkgktq lhkwaersvt lcgtclivss vkdshagkmh ilpliggkve
      241 emkrrqytla ftsagaqaqt yhvsfetlae cqrwhrqast ivsmrfsmvd lscysleevp
      301 ehlfysqdit ylnlrhnfmr tsgagsldsl crfsqlksln lshnrlgefp vslceistlt
      361 elniscnglh ylpsqigkll nlqtfwldgn fltslpeemg nlqqlsclgl sfnnfcelpa
      421 iceklvtldk lalagnllet ldltvlnrmg hiksvdlrln nlkraaadtl egnksvaymd
      481 lrdnqmtdld lsslvsleql hcernklrel tlsgfslral yansncltav niypvpgllt
      541 clelshnqlq cvpdwaceak klevldvsyn lllelpsril rslslrklmv ghnrlqslpp
      601 llehiplevl dlqhnllakl petlfvkaln lrylnasans leslpttcpg eeslsmlqll
      661 yltnnnltdq cipvlvghpn lrilhlannn lqtfpaskls klehleelnl sgnklktipt
      721 tvanckllht liahsneisi fpevlhlpri qfvdlscnel teilipealp galqeldlsg
      781 ntnlvlehkt ldifshittl kidakpslta dsaltsvfws hgvaemagqr nklcvssltl
      841 gsfaegveav ygmfdgdkne elprllqctm advlleevqq sdtmfmsntf lvshr
//
LOCUS       XP_041340716             821 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-1 complex subunit gamma-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340716
VERSION     XP_041340716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..821
                     /product="AP-1 complex subunit gamma-1 isoform X1"
                     /calculated_mol_wt=91269
     Region          23..577
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          142..163
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(155..156,159,162..163,192..193,196,199..200,203,
                     232..233,236,268..269,272,275..276,310..311,314,317..318)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          175..203
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          246..276
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          287..319
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          708..816
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..821
                     /gene="AP1G1"
                     /coded_by="XM_041484782.1:834..3299"
                     /db_xref="GeneID:121362876"
ORIGIN      
        1 mpapirlrel irtirtartq aeeremiqke caairssfre edntyrcrnv akllymhmlg
       61 ypahfgqlec lkliasqkft dkrigylgam lllderqdvh llmtnciknd lnhstqyvqg
      121 lalctlgcmg ssemcrdlag evekllktsn sylrkkaalc avhvirkvpe lmemflpatk
      181 nllneknhgv lhtsvvllte mcerspdmla hfrkneklvp qlvrilknli msgyspehdv
      241 sgisdpflqv rilrllrilg rndddsseam ndilaqvatn tetsknvgna ilyetvltim
      301 diksesglrv lainilgrfl lnndkniryv altsllktvq tdhnavqrhr stivdclkdl
      361 dvsikrrame lsfalvngnn vrgmmkelly fldscepefk adcasgifla aekyapskrw
      421 hidtimrvlt tagsyvrdda vpnliqlitn svemhaytvq rlykailgdy sqqplvqvas
      481 wcigeygdll vsgqceeeep iqvtedevld ilesvlisnm sasvtrgyal taimklstrf
      541 tctvnrikkv vsiygssidv elqqraveyn alfkkydhmr pallermpvm ekvttngpae
      601 ivqtngetet avletkppps glqpanqand lldllggsdi tpviptapts kpataggell
      661 dllgdlnltg spvsapapqi aqppflldgl tcqplfndia agipsitayn knglkidftf
      721 ersntnpsvt vitiqasnst eldmtdfvfq aavpktfqlq llspsssvip afnsgtitqv
      781 ikvlnpqkqq lrmrikltyn hkgsamqdla evnnfppqsw q
//
LOCUS       XP_041340726             818 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-1 complex subunit gamma-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340726
VERSION     XP_041340726.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484792.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..818
                     /product="AP-1 complex subunit gamma-1 isoform X2"
                     /calculated_mol_wt=90897
     Region          23..574
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          142..163
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(155..156,159,162..163,192..193,196,199..200,203,
                     229..230,233,265..266,269,272..273,307..308,311,314..315)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          175..203
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          243..273
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          284..316
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          705..813
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..818
                     /gene="AP1G1"
                     /coded_by="XM_041484792.1:834..3290"
                     /db_xref="GeneID:121362876"
ORIGIN      
        1 mpapirlrel irtirtartq aeeremiqke caairssfre edntyrcrnv akllymhmlg
       61 ypahfgqlec lkliasqkft dkrigylgam lllderqdvh llmtnciknd lnhstqyvqg
      121 lalctlgcmg ssemcrdlag evekllktsn sylrkkaalc avhvirkvpe lmemflpatk
      181 nllneknhgv lhtsvvllte mcerspdmla hfrklvpqlv rilknlimsg yspehdvsgi
      241 sdpflqvril rllrilgrnd ddsseamndi laqvatntet sknvgnaily etvltimdik
      301 sesglrvlai nilgrfllnn dkniryvalt sllktvqtdh navqrhrsti vdclkdldvs
      361 ikrramelsf alvngnnvrg mmkellyfld scepefkadc asgiflaaek yapskrwhid
      421 timrvlttag syvrddavpn liqlitnsve mhaytvqrly kailgdysqq plvqvaswci
      481 geygdllvsg qceeeepiqv tedevldile svlisnmsas vtrgyaltai mklstrftct
      541 vnrikkvvsi ygssidvelq qraveynalf kkydhmrpal lermpvmekv ttngpaeivq
      601 tngetetavl etkpppsglq panqandlld llggsditpv iptaptskpa taggelldll
      661 gdlnltgspv sapapqiaqp pflldgltcq plfndiaagi psitaynkng lkidftfers
      721 ntnpsvtvit iqasnsteld mtdfvfqaav pktfqlqlls psssvipafn sgtitqvikv
      781 lnpqkqqlrm rikltynhkg samqdlaevn nfppqswq
//
LOCUS       XP_041340733             789 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-1 complex subunit gamma-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041340733
VERSION     XP_041340733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..789
                     /product="AP-1 complex subunit gamma-1 isoform X3"
                     /calculated_mol_wt=88037
     Region          23..577
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          142..163
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(155..156,159,162..163,192..193,196,199..200,203,
                     232..233,236,268..269,272,275..276,310..311,314,317..318)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          175..203
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          246..276
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          287..319
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          676..784
                     /region_name="Alpha_adaptinC2"
                     /note="Adaptin C-terminal domain; smart00809"
                     /db_xref="CDD:197886"
     CDS             1..789
                     /gene="AP1G1"
                     /coded_by="XM_041484799.1:834..3203"
                     /db_xref="GeneID:121362876"
ORIGIN      
        1 mpapirlrel irtirtartq aeeremiqke caairssfre edntyrcrnv akllymhmlg
       61 ypahfgqlec lkliasqkft dkrigylgam lllderqdvh llmtnciknd lnhstqyvqg
      121 lalctlgcmg ssemcrdlag evekllktsn sylrkkaalc avhvirkvpe lmemflpatk
      181 nllneknhgv lhtsvvllte mcerspdmla hfrkneklvp qlvrilknli msgyspehdv
      241 sgisdpflqv rilrllrilg rndddsseam ndilaqvatn tetsknvgna ilyetvltim
      301 diksesglrv lainilgrfl lnndkniryv altsllktvq tdhnavqrhr stivdclkdl
      361 dvsikrrame lsfalvngnn vrgmmkelly fldscepefk adcasgifla aekyapskrw
      421 hidtimrvlt tagsyvrdda vpnliqlitn svemhaytvq rlykailgdy sqqplvqvas
      481 wcigeygdll vsgqceeeep iqvtedevld ilesvlisnm sasvtrgyal taimklstrf
      541 tctvnrikkv vsiygssidv elqqraveyn alfkkydhmr pallermpvm ekvttngpae
      601 ivqtngetet avletkppps glqpanqand lldllggsdi tpviptapts kpataggell
      661 dllgdlnltg ipsitaynkn glkidftfer sntnpsvtvi tiqasnstel dmtdfvfqaa
      721 vpktfqlqll spsssvipaf nsgtitqvik vlnpqkqqlr mrikltynhk gsamqdlaev
      781 nnfppqswq
//
LOCUS       XP_041340745             688 aa            linear   VRT 06-MAY-2021
DEFINITION  ataxin-1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340745
VERSION     XP_041340745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="ataxin-1-like"
                     /calculated_mol_wt=73028
     Region          1..>212
                     /region_name="ATXN-1_C"
                     /note="Ataxin-1 like family; pfam12547"
                     /db_xref="CDD:463627"
     Region          464..574
                     /region_name="AXH"
                     /note="Ataxin-1 and HBP1 module (AXH); pfam08517"
                     /db_xref="CDD:462505"
     CDS             1..688
                     /gene="ATXN1L"
                     /coded_by="XM_041484811.1:215..2281"
                     /db_xref="GeneID:121362893"
ORIGIN      
        1 mraghersqe clppkkrela aantgteagr aggaqgsgeg pewartarpa patpryspge
       61 apeaaagltv dqygmlykvq appatfsptg lhpvvnvspl ppafnvtspi iqhpavpfps
      121 ihyaqipsas lqligshytv pyavppafmp spllspstnl ttphvphfvp yaslfteeaa
      181 pspqttspth sfnkstsaas pgqiqhhtvp qpvdmapgri pvyyqmsrfp pgysayeapv
      241 aggspespqq dsqlssevaa anggqrpleq svarrpseav dsassaaedc lppgaaagcv
      301 adgqflpgyq mlgreisvpt hrstpdadle vqrvvgmlas qdyhvlaaqr kddpsplnlc
      361 hntpdgqgdm lrnttdraaa gnsqsrspcg mspeetvrqr qlakgmvian gkpvlvpvgs
      421 epvrsstsea llrespdaqa qgnvhekela qlqppsssql pshfmkgaii qlatgelkrv
      481 edlqtqdfvr saevsgglki dsstvvdiqe sqwpglvtlh fvvgeqqskv sidvppehpf
      541 fvygqgwssc spgrtaqlfa lpchrlqvgd vcisislqsm ngnsasqans pltdqlvsar
      601 erlertaqgp repsdraaer kshtdrtsta qssraessqt eagslyslap gfqrysmqae
      661 eprpsllrps fipqevklsi egrsnagk
//
LOCUS       XP_041340755             455 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine aminotransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041340755
VERSION     XP_041340755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="tyrosine aminotransferase"
                     /calculated_mol_wt=50487
     Region          1..40
                     /region_name="TAT_ubiq"
                     /note="Aminotransferase ubiquitination site; pfam07706"
                     /db_xref="CDD:462236"
     Region          41..442
                     /region_name="tyr_amTase_E"
                     /note="tyrosine aminotransferase, eukaryotic; TIGR01264"
                     /db_xref="CDD:273529"
     CDS             1..455
                     /gene="TAT"
                     /coded_by="XM_041484821.1:647..2014"
                     /db_xref="GeneID:121362901"
ORIGIN      
        1 mdsyliqvng hgdhaplldv hlkntgntis pgkvkgrkpr wavrasemsk ktfnpiraiv
       61 dsmkvepnpk kamislslgd ptvfgnlptn devtravkev ldsgqyngya psvgyqscre
      121 avaayyncpe aplkaqdvil tsgcsqaiel alavlanpgq nilvprpgfs lyktlalsmg
      181 ievklynllp ekaweidleh leslvdekta clivnnpsnp cgsvfrkshl qeilavasrq
      241 cvpiladeiy gdmvfadyky epiatlstnv pilscgglak rwlvpgwrmg wilihdrrdi
      301 fgneirdgll rlsqrilgpc tivqgaleri lhrtppefyh ntlsilksna dlcyaalsai
      361 pglqpvrpag amylmveiem ehfpefendv efterliseq svfclpatcf eypnffrvvi
      421 tvpeemilea csriqefcem hyqgaegaqd lecdk
//
LOCUS       XP_041340765             455 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine aminotransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041340765
VERSION     XP_041340765.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484831.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="tyrosine aminotransferase"
                     /calculated_mol_wt=50487
     Region          1..40
                     /region_name="TAT_ubiq"
                     /note="Aminotransferase ubiquitination site; pfam07706"
                     /db_xref="CDD:462236"
     Region          41..442
                     /region_name="tyr_amTase_E"
                     /note="tyrosine aminotransferase, eukaryotic; TIGR01264"
                     /db_xref="CDD:273529"
     CDS             1..455
                     /gene="TAT"
                     /coded_by="XM_041484831.1:134..1501"
                     /db_xref="GeneID:121362901"
ORIGIN      
        1 mdsyliqvng hgdhaplldv hlkntgntis pgkvkgrkpr wavrasemsk ktfnpiraiv
       61 dsmkvepnpk kamislslgd ptvfgnlptn devtravkev ldsgqyngya psvgyqscre
      121 avaayyncpe aplkaqdvil tsgcsqaiel alavlanpgq nilvprpgfs lyktlalsmg
      181 ievklynllp ekaweidleh leslvdekta clivnnpsnp cgsvfrkshl qeilavasrq
      241 cvpiladeiy gdmvfadyky epiatlstnv pilscgglak rwlvpgwrmg wilihdrrdi
      301 fgneirdgll rlsqrilgpc tivqgaleri lhrtppefyh ntlsilksna dlcyaalsai
      361 pglqpvrpag amylmveiem ehfpefendv efterliseq svfclpatcf eypnffrvvi
      421 tvpeemilea csriqefcem hyqgaegaqd lecdk
//
LOCUS       XP_041340776             392 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340776
VERSION     XP_041340776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="carbohydrate sulfotransferase 4-like"
                     /calculated_mol_wt=44753
     Region          <165..352
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..392
                     /gene="LOC121362911"
                     /coded_by="XM_041484842.1:45..1223"
                     /db_xref="GeneID:121362911"
ORIGIN      
        1 mvksrrvqvl lilvvlsfll ihflpcsnna hmeekpspvh ililsswrsg ssftgqifsq
       61 hpsvfylmep awhvwvkmyq nsakvlhmav rdlvrsvflc dmsvfdayms sqkkksdlfq
      121 wetsralcsp pacdsfsrsd iitagnckti cgkypfskve eacktyshva ikevrffdlk
      181 vlyplltdps lnlkiihlvr dpravfrsre ntmadlkrds nivvgsqktk gemgpyntmq
      241 vickshveiy kagsqaapsf lkdryllvry edivrdplar aaqmyrfael hftpelqkwv
      301 hnithgkghg aqafdigsrd alrvsqawrk tlpfqkiekv qnvckdamdl lgyrlvrsee
      361 eqknmsldll ftqnssdyqi lkaeklvsas tl
//
LOCUS       XP_041340786             392 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041340786
VERSION     XP_041340786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="carbohydrate sulfotransferase 4-like"
                     /calculated_mol_wt=44753
     Region          <165..352
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..392
                     /gene="LOC121362911"
                     /coded_by="XM_041484852.1:71..1249"
                     /db_xref="GeneID:121362911"
ORIGIN      
        1 mvksrrvqvl lilvvlsfll ihflpcsnna hmeekpspvh ililsswrsg ssftgqifsq
       61 hpsvfylmep awhvwvkmyq nsakvlhmav rdlvrsvflc dmsvfdayms sqkkksdlfq
      121 wetsralcsp pacdsfsrsd iitagnckti cgkypfskve eacktyshva ikevrffdlk
      181 vlyplltdps lnlkiihlvr dpravfrsre ntmadlkrds nivvgsqktk gemgpyntmq
      241 vickshveiy kagsqaapsf lkdryllvry edivrdplar aaqmyrfael hftpelqkwv
      301 hnithgkghg aqafdigsrd alrvsqawrk tlpfqkiekv qnvckdamdl lgyrlvrsee
      361 eqknmsldll ftqnssdyqi lkaeklvsas tl
//
LOCUS       XP_041340797             252 aa            linear   VRT 06-MAY-2021
DEFINITION  MARVEL domain-containing protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340797
VERSION     XP_041340797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..252
                     /product="MARVEL domain-containing protein 3 isoform X1"
                     /calculated_mol_wt=27093
     CDS             1..252
                     /gene="MARVELD3"
                     /coded_by="XM_041484863.1:312..1070"
                     /db_xref="GeneID:121362922"
ORIGIN      
        1 maergcpraa qggragagrr tvpapeaegp rgsrtvpgsl errrclylrt graccqmvev
       61 llaalilvcs svscgsaggy tglpalggiy yyqyggaysg fsgadgeraq qldqrfyllk
      121 lpiaraamvv agcllvfpcv lilvgvlqvp whfpawllie cilyiviavg tvpalyyflh
      181 sllsvynssv ckereklyqs kgyqgfwcsl hgaeiaagll gcmaamayll saglavrdyr
      241 tvheqkqkpl ql
//
LOCUS       XP_041340804             182 aa            linear   VRT 06-MAY-2021
DEFINITION  MARVEL domain-containing protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340804
VERSION     XP_041340804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024509988.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="MARVEL domain-containing protein 3 isoform X2"
                     /calculated_mol_wt=19139
     CDS             1..182
                     /gene="MARVELD3"
                     /coded_by="XM_041484870.1:312..860"
                     /db_xref="GeneID:121362922"
ORIGIN      
        1 maergcpraa qggragagrr tvpapeaegp rgsrtvpgsl errrclylrt graccqmvev
       61 llaalilvcs svscgsaggy tglpalggiy yyqyggaysg fsgadgeraq qldqrfyllk
      121 lpiaraamvv agcllvfpcv lillllelys aieskftgqh sssrkqkaal itgkpnstlt
      181 vf
//
LOCUS       XP_041340846             175 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein assembly factor 3, axonemal isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340846
VERSION     XP_041340846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484912.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510022.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..175
                     /product="dynein assembly factor 3, axonemal isoform X1"
                     /calculated_mol_wt=17989
     Region          14..>63
                     /region_name="DUF4470"
                     /note="Domain of unknown function (DUF4470); pfam14737"
                     /db_xref="CDD:464289"
     CDS             1..175
                     /gene="DNAAF3"
                     /coded_by="XM_041484912.1:150..677"
                     /db_xref="GeneID:121362957"
ORIGIN      
        1 maaaledavg tvcwwglspa idlrlhlppg peasvllvga aegrhllmta ararrgpprd
       61 itvrtgtpgg tpvpvpgsvs rcrapgrgea pgsglsrcyr gspgatgalp qlfvaeqspe
      121 pvarqllfll laleaperpr aagtgtpvtp vsfwfpsavp gvpsipcvps rclrr
//
LOCUS       XP_041340854             161 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein assembly factor 3, axonemal isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340854
VERSION     XP_041340854.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484920.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510022.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..161
                     /product="dynein assembly factor 3, axonemal isoform X2"
                     /calculated_mol_wt=16530
     Region          14..>63
                     /region_name="DUF4470"
                     /note="Domain of unknown function (DUF4470); pfam14737"
                     /db_xref="CDD:464289"
     CDS             1..161
                     /gene="DNAAF3"
                     /coded_by="XM_041484920.1:150..635"
                     /db_xref="GeneID:121362957"
ORIGIN      
        1 maaaledavg tvcwwglspa idlrlhlppg peasvllvga aegrhllmta ararrgpprd
       61 itvrtgtpgg tpvpvpgsvs rcrapgrgea pgsglsrcyr gspgatgalp vlpglsrsss
      121 wpsrapspwl asscsccwrw khrsgpepqv pappvtpvsp r
//
LOCUS       XP_041340874             197 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-7 homolog C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340874
VERSION     XP_041340874.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484940.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..197
                     /product="protein lin-7 homolog C isoform X1"
                     /calculated_mol_wt=21716
     Region          14..66
                     /region_name="L27"
                     /note="L27 domain; pfam02828"
                     /db_xref="CDD:460717"
     Region          90..175
                     /region_name="PDZ_Lin-7-like"
                     /note="PDZ domain of protein Lin-7 and related domains;
                     cd06796"
                     /db_xref="CDD:467258"
     Site            order(102..108,120,123,153,157,160..161)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467258"
     CDS             1..197
                     /gene="LIN7C"
                     /coded_by="XM_041484940.1:30..623"
                     /db_xref="GeneID:121362978"
ORIGIN      
        1 maalgepvrl erdicraiel leklqrsgev ppqklqalqr vlqsefcnav revyehvyet
       61 vdissspevr anatakatva afaaseghsh prvvelpkte eglgfnimgg keqnspiyis
      121 riipggiadr hgglkrgdql lsvngvsveg ehhekavell kaaqgkvklv vrytpkvlee
      181 mesrfekmrs akrrqqn
//
LOCUS       XP_041340886             192 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-7 homolog C isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340886
VERSION     XP_041340886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="protein lin-7 homolog C isoform X2"
                     /calculated_mol_wt=21072
     Region          9..61
                     /region_name="L27"
                     /note="L27 domain; pfam02828"
                     /db_xref="CDD:460717"
     Region          85..170
                     /region_name="PDZ_Lin-7-like"
                     /note="PDZ domain of protein Lin-7 and related domains;
                     cd06796"
                     /db_xref="CDD:467258"
     Site            order(97..103,115,118,148,152,155..156)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467258"
     CDS             1..192
                     /gene="LIN7C"
                     /coded_by="XM_041484952.1:116..694"
                     /db_xref="GeneID:121362978"
ORIGIN      
        1 mtslcgsdic raielleklq rsgevppqkl qalqrvlqse fcnavrevye hvyetvdiss
       61 spevranata katvaafaas eghshprvve lpkteeglgf nimggkeqns piyisriipg
      121 giadrhgglk rgdqllsvng vsvegehhek avellkaaqg kvklvvrytp kvleemesrf
      181 ekmrsakrrq qn
//
LOCUS       XP_041340897             931 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF18A [Pyrgilauda ruficollis].
ACCESSION   XP_041340897
VERSION     XP_041340897.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484963.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..931
                     /product="kinesin-like protein KIF18A"
                     /calculated_mol_wt=105519
     Region          12..355
                     /region_name="KISc_KIP3_like"
                     /note="Kinesin motor domain, KIP3-like subgroup; cd01370"
                     /db_xref="CDD:276821"
     Site            order(20,114,117,119..122,259)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276821"
     Site            order(308,311,314)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276821"
     CDS             1..931
                     /gene="KIF18A"
                     /coded_by="XM_041484963.1:217..3012"
                     /db_xref="GeneID:121362993"
ORIGIN      
        1 mtpaqeedvc shvkvvvrvr pesqkekqgn frrvvrvidq hvlvfdpeee evsffnrrrv
       61 thrdinkrqr kdlkfmfdti fddsssqlev fehttknvie gflngynctv laygatgagk
      121 thtmlgsped pgvmyltmvt lykrmdqikd dktcdvavsy levyneqird llvnsgplav
      181 redgqqgvvv qgltlhqpks aeeilqmldy gnknrtqhpt dmnasssrsh avfqiylrqq
      241 dktasinqnv riakmslidl agserakats akgarfvegt ninrsllalg nvinaladpk
      301 skkhipyrns kltrllkdsl ggncrtimia aispsslfyd dtyntlkyan rakdiksslk
      361 snvvslnshi shyakicseq qkeilmlkek lrkyeekqas ipqnhntael snnqrveier
      421 ykevlknvfa kreeirkeyl kvekklkent lkkyyqnqch eqiqlicsee rvekatckrd
      481 lrlsalnchy vrmqkkreeq snlfeentkw lhrvenemrl lgpdgcipke lcqdlqychl
      541 nlevqalkaq iehmltlvsl qdqynkqtek vlttalpvlr kqhlmlreag ltndlsetey
      601 aeveqliqrq ksvawadqte eknqnqndev emsaifsfpq lvsrpntpcs tssgtpsqer
      661 nnntrqvley teppqkrmrr klmdspvvap sppasshcsl qhledslake vyplvntpds
      721 crkpvhslca qpvakealhl aglgavsacr advpgrkgsi mdttcdvipe shealmnsti
      781 vlyegteeta emsayssvke sqpcassivq rldfsslrnk nsapvfqkps ymamtsaaqr
      841 krkilsstsn tvlgslqapd aakrsrqdvl lshaalrvpq gagirmktkk qeqnmprnfi
      901 rslsqgnvpl dvkartskhl llrvskkknr i
//
LOCUS       XP_041340905             931 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF18A [Pyrgilauda ruficollis].
ACCESSION   XP_041340905
VERSION     XP_041340905.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484971.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..931
                     /product="kinesin-like protein KIF18A"
                     /calculated_mol_wt=105519
     Region          12..355
                     /region_name="KISc_KIP3_like"
                     /note="Kinesin motor domain, KIP3-like subgroup; cd01370"
                     /db_xref="CDD:276821"
     Site            order(20,114,117,119..122,259)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276821"
     Site            order(308,311,314)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276821"
     CDS             1..931
                     /gene="KIF18A"
                     /coded_by="XM_041484971.1:311..3106"
                     /db_xref="GeneID:121362993"
ORIGIN      
        1 mtpaqeedvc shvkvvvrvr pesqkekqgn frrvvrvidq hvlvfdpeee evsffnrrrv
       61 thrdinkrqr kdlkfmfdti fddsssqlev fehttknvie gflngynctv laygatgagk
      121 thtmlgsped pgvmyltmvt lykrmdqikd dktcdvavsy levyneqird llvnsgplav
      181 redgqqgvvv qgltlhqpks aeeilqmldy gnknrtqhpt dmnasssrsh avfqiylrqq
      241 dktasinqnv riakmslidl agserakats akgarfvegt ninrsllalg nvinaladpk
      301 skkhipyrns kltrllkdsl ggncrtimia aispsslfyd dtyntlkyan rakdiksslk
      361 snvvslnshi shyakicseq qkeilmlkek lrkyeekqas ipqnhntael snnqrveier
      421 ykevlknvfa kreeirkeyl kvekklkent lkkyyqnqch eqiqlicsee rvekatckrd
      481 lrlsalnchy vrmqkkreeq snlfeentkw lhrvenemrl lgpdgcipke lcqdlqychl
      541 nlevqalkaq iehmltlvsl qdqynkqtek vlttalpvlr kqhlmlreag ltndlsetey
      601 aeveqliqrq ksvawadqte eknqnqndev emsaifsfpq lvsrpntpcs tssgtpsqer
      661 nnntrqvley teppqkrmrr klmdspvvap sppasshcsl qhledslake vyplvntpds
      721 crkpvhslca qpvakealhl aglgavsacr advpgrkgsi mdttcdvipe shealmnsti
      781 vlyegteeta emsayssvke sqpcassivq rldfsslrnk nsapvfqkps ymamtsaaqr
      841 krkilsstsn tvlgslqapd aakrsrqdvl lshaalrvpq gagirmktkk qeqnmprnfi
      901 rslsqgnvpl dvkartskhl llrvskkknr i
//
LOCUS       XP_041340917            1028 aa            linear   VRT 06-MAY-2021
DEFINITION  anoctamin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041340917
VERSION     XP_041340917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484983.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1028
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1028
                     /product="anoctamin-3 isoform X1"
                     /calculated_mol_wt=120042
     Region          199..424
                     /region_name="Anoct_dimer"
                     /note="dimerization domain of Ca+-activated
                     chloride-channel, anoctamin; pfam16178"
                     /db_xref="CDD:465044"
     Region          427..996
                     /region_name="Anoctamin"
                     /note="Calcium-activated chloride channel; pfam04547"
                     /db_xref="CDD:461349"
     CDS             1..1028
                     /gene="ANO3"
                     /coded_by="XM_041484983.1:1..3087"
                     /db_xref="GeneID:121363007"
ORIGIN      
        1 msavtieldk issdeieskr dskpdfkqgk ssqsrvdyhh gfqlhcsrsa pagmntskse
       61 tvkehplkps rrsmpclaqs qthpqslskh ssflqpnrvq pqplsagtsa aavdvvsera
      121 kvmetlesnl lklsnteygd pfldvgkdkd tytddsehgn ydartdqsll iqnkltrqrt
      181 eprtksslks damassglff kdgkkridyi lvykksspqv ekrstfeknl raeglmlere
      241 pavtnsdimf vkihcpwetl ckyaermnir mpfrkkcyyt dwrsktmgsl qrnirelksw
      301 lprnpmkldk ealpdleetd cytapfsrar ihhftinnkd sffsnstrsr ivhhvlqrtk
      361 yedgkskmgi nrllnngtye aafpphegsh ksrhpikthg aqnhrhllye rwarwgmwyk
      421 yqpldlirry fgekiglyfa wlgwytgmli paalvglfvf lyglftmdss qvskeicean
      481 etimcpmcer nctlqklnes ciyakvthlf dnggtvffai fmaiwatvfl efwkrrravl
      541 tydwdlidwe deeeelrpqf eakysqverv npitgkpepf qpfpdklsrl mvsvsgiffm
      601 islvltavfa vvvyrlvame qfasfkwyfi kkywqfatsg tgvcinfmii mslnvvyekv
      661 aylltdlehp rtesewensf alkmflfqfv nlnssifyia fflgrfagrp gkynklfnrw
      721 rleechpsgc lidlclqmgv imvlkqmwnn fmelgypllq nwwsrrkmkr rgqsmenkis
      781 lpqwekdwnl qpmnlhglmd eylemvlqfg fttifvaafp lapllallnn iieirldayk
      841 fvtqwrrpmp aratdigiwy gilegigvla vitnafviai tsdyiprfvy aykygpctdq
      901 gyrqekclkg yvnsslsvfd lselgmgysg ycryrdyrap pwsstpyeft lqfwhvlaar
      961 lafiivfehl vfgiksfiay lipdipkdlc drmrrekylv qemmyeaele hlqrerkkng
     1021 kqyhhewp
//
LOCUS       XP_041340928             992 aa            linear   VRT 06-MAY-2021
DEFINITION  anoctamin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041340928
VERSION     XP_041340928.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041484994.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..992
                     /product="anoctamin-3 isoform X2"
                     /calculated_mol_wt=116092
     Region          163..388
                     /region_name="Anoct_dimer"
                     /note="dimerization domain of Ca+-activated
                     chloride-channel, anoctamin; pfam16178"
                     /db_xref="CDD:465044"
     Region          391..960
                     /region_name="Anoctamin"
                     /note="Calcium-activated chloride channel; pfam04547"
                     /db_xref="CDD:461349"
     CDS             1..992
                     /gene="ANO3"
                     /coded_by="XM_041484994.1:8..2986"
                     /db_xref="GeneID:121363007"
ORIGIN      
        1 mvhhsgsiqs frqqkgmnts ksetvkehpl kpsrrsmpcl aqsqthpqsl skhssflqpn
       61 rvqpqplsag tsaaavdvvs erakvmetle snllklsnte ygdpfldvgk dkdtytddse
      121 hgnydartdq slliqnkltr qrteprtkss lkdsdamass glffkdgkkr idyilvykks
      181 spqvekrstf eknlraeglm lerepavtns dimfvkihcp wetlckyaer mnirmpfrkk
      241 cyytdwrskt mgslqrnire lkswlprnpm kldkealpdl eetdcytapf srarihhfti
      301 nnkdsffsns trsrivhhvl qrtkyedgks kmginrllnn gtyeaafpph egshksrhpi
      361 kthgaqnhrh llyerwarwg mwykyqpldl irryfgekig lyfawlgwyt gmlipaalvg
      421 lfvflyglft mdssqvskei ceanetimcp mcernctlqk lnesciyakv thlfdnggtv
      481 ffaifmaiwa tvflefwkrr ravltydwdl idwedeeeel rpqfeakysq vervnpitgk
      541 pepfqpfpdk lsrlmvsvsg iffmislvlt avfavvvyrl vameqfasfk wyfikkywqf
      601 atsgtgvcin fmiimslnvv yekvaylltd lehprtesew ensfalkmfl fqfvnlnssi
      661 fyiafflgrf agrpgkynkl fnrwrleech psgclidlcl qmgvimvlkq mwnnfmelgy
      721 pllqnwwsrr kmkrrgqsme nkislpqwek dwnlqpmnlh glmdeylemv lqfgfttifv
      781 aafplaplla llnniieirl daykfvtqwr rpmparatdi giwygilegi gvlavitnaf
      841 viaitsdyip rfvyaykygp ctdqgyrqek clkgyvnssl svfdlselgm gysgycryrd
      901 yrappwsstp yeftlqfwhv laarlafiiv fehlvfgiks fiaylipdip kdlcdrmrre
      961 kylvqemmye aelehlqrer kkngkqyhhe wp
//
LOCUS       XP_041340941             207 aa            linear   VRT 06-MAY-2021
DEFINITION  fin bud initiation factor homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041340941
VERSION     XP_041340941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485007.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="fin bud initiation factor homolog"
                     /calculated_mol_wt=23085
     Region          17..206
                     /region_name="Fibin"
                     /note="Fin bud initiation factor homolog; pfam15819"
                     /db_xref="CDD:406297"
     CDS             1..207
                     /gene="FIBIN"
                     /coded_by="XM_041485007.1:129..752"
                     /db_xref="GeneID:121363013"
ORIGIN      
        1 mrlplrlawl lglcslcrgy fegplypems ngslhhyfvp dgdyeenddp ercqllfrvs
       61 eqrrcgaaaa ggglslreel tvlgrqveda grvlegigrs isydldgees ygaylrresa
      121 qisdaysssd rslselegkf rqgqeqggre esrlgdsflg lllharallr etrhvssglr
      181 dkydllaltv rshgarlsrl kndylra
//
LOCUS       XP_041340959             254 aa            linear   VRT 06-MAY-2021
DEFINITION  brain-derived neurotrophic factor isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340959
VERSION     XP_041340959.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485025.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="brain-derived neurotrophic factor isoform X1"
                     /calculated_mol_wt=28619
     Region          140..247
                     /region_name="NGF"
                     /note="Nerve growth factor (NGF or beta-NGF); smart00140"
                     /db_xref="CDD:128445"
     CDS             1..254
                     /gene="BDNF"
                     /coded_by="XM_041485025.1:323..1087"
                     /db_xref="GeneID:121363021"
ORIGIN      
        1 mfhqvrrvmt ilfftmvisy ftcmkaapmk easlrgqgsl aypglrthgt lesingpsag
       61 srgltsladt fehvieelld eeqdiqpseg nkdadlytsr vmlssqvple ppllflleey
      121 knyldaanms mrvrrhsdpa rrgelsvcds tsewvtaaek ktavdmsgat vtvlekvpvp
      181 kgqlkqyfye tkcnpkgytk egcrgidkrh wnsqcrttqs yvraltmdnk krvgwrfiri
      241 dtscvctlti krgr
//
LOCUS       XP_041340968             254 aa            linear   VRT 06-MAY-2021
DEFINITION  brain-derived neurotrophic factor isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340968
VERSION     XP_041340968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485034.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="brain-derived neurotrophic factor isoform X2"
                     /calculated_mol_wt=28619
     Region          140..247
                     /region_name="NGF"
                     /note="Nerve growth factor (NGF or beta-NGF); smart00140"
                     /db_xref="CDD:128445"
     CDS             1..254
                     /gene="BDNF"
                     /coded_by="XM_041485034.1:198..962"
                     /db_xref="GeneID:121363021"
ORIGIN      
        1 mfhqvrrvmt ilfftmvisy ftcmkaapmk easlrgqgsl aypglrthgt lesingpsag
       61 srgltsladt fehvieelld eeqdiqpseg nkdadlytsr vmlssqvple ppllflleey
      121 knyldaanms mrvrrhsdpa rrgelsvcds tsewvtaaek ktavdmsgat vtvlekvpvp
      181 kgqlkqyfye tkcnpkgytk egcrgidkrh wnsqcrttqs yvraltmdnk krvgwrfiri
      241 dtscvctlti krgr
//
LOCUS       XP_041340978             246 aa            linear   VRT 06-MAY-2021
DEFINITION  brain-derived neurotrophic factor isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340978
VERSION     XP_041340978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="brain-derived neurotrophic factor isoform X3"
                     /calculated_mol_wt=27565
     Region          132..239
                     /region_name="NGF"
                     /note="Nerve growth factor (NGF or beta-NGF); smart00140"
                     /db_xref="CDD:128445"
     CDS             1..246
                     /gene="BDNF"
                     /coded_by="XM_041485044.1:46..786"
                     /db_xref="GeneID:121363021"
ORIGIN      
        1 mtilfftmvi syftcmkaap mkeaslrgqg slaypglrth gtlesingps agsrgltsla
       61 dtfehvieel ldeeqdiqps egnkdadlyt srvmlssqvp leppllflle eyknyldaan
      121 msmrvrrhsd parrgelsvc dstsewvtaa ekktavdmsg atvtvlekvp vpkgqlkqyf
      181 yetkcnpkgy tkegcrgidk rhwnsqcrtt qsyvraltmd nkkrvgwrfi ridtscvctl
      241 tikrgr
//
LOCUS       XP_041340991             629 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-coupled monocarboxylate transporter 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041340991
VERSION     XP_041340991.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485057.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="sodium-coupled monocarboxylate transporter 2"
                     /calculated_mol_wt=68484
     Region          9..537
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(65,68,350,353..354)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..629
                     /gene="SLC5A12"
                     /coded_by="XM_041485057.1:1..1890"
                     /db_xref="GeneID:121363032"
ORIGIN      
        1 mpnfvapevk kfvtwdyvvf aalflvsasi gvffavkerk kktskeflvg gkqmtcgpia
       61 fsltssfmsa vtvlgtpsev yrygasfvlf fltytlviif tselflpvfy rsgitstyey
      121 lelrfnkivr laatliyilq tilytgivvy apslalnqvt gfdlwgsvaa tgivctfyct
      181 lgglkavvwt dafqmvvmva gfmavlirgt glnggatkvw edahegsrln ifdfdvdplr
      241 rhtfwtivig gtftwlglyg vnqstiqrci sckserhakl alylnllglw tvlvcavfcg
      301 lvmyshyksc dpwtaafisa pdqlmpyfvm difssmpgvp glfvacafsg tlstvaasin
      361 alatvtfedl vkkgfpnvse kmstwiskgl cvlygvlcts maaaasllgg vvqaslsihg
      421 mcggpmlglf tlgivfpcan wkgalgglla gislafwagt gsfiypappt ksiplqlstl
      481 nctlanstea lltaaptlap erplladtwy slsylyfsai gcvgcaitgl lisfitgpsk
      541 gedippvlik pvcnlfcfws krlkillwcg vrhdslemdl ekklpetaan ktrtdstfkn
      601 ntnkennhqi rgynseensy tnisresrl
//
LOCUS       XP_041341005             950 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing G-protein coupled receptor 4 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041341005
VERSION     XP_041341005.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485071.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..950
                     /product="leucine-rich repeat-containing G-protein coupled
                     receptor 4 isoform X1"
                     /calculated_mol_wt=104283
     Region          51..>462
                     /region_name="PLN00113"
                     /note="leucine-rich repeat receptor-like protein kinase;
                     Provisional"
                     /db_xref="CDD:215061"
     Region          62..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <75..>263
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          83..106
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          107..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          227..249
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          250..273
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          274..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          345..365
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          367..390
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          391..414
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          415..438
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          538..811
                     /region_name="7tmA_LGR4"
                     /note="leucine-rich repeats-containing G protein-coupled
                     receptor 4, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15361"
                     /db_xref="CDD:320483"
     Region          539..565
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320483"
     Region          572..597
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320483"
     Site            order(593,596..597,617..622,624..625,628,673,675..679,701,
                     704..706,708..710,712..713,759,762..763,765..766,769,
                     778..779,781..783,786,789..790)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320483"
     Region          617..647
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320483"
     Region          659..681
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320483"
     Region          701..730
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320483"
     Region          739..769
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320483"
     Region          779..804
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320483"
     CDS             1..950
                     /gene="LGR4"
                     /coded_by="XM_041485071.1:358..3210"
                     /db_xref="GeneID:121363037"
ORIGIN      
        1 mrclallglv awglgswagh sggaspppcp apcscdgdrg vdcsgrglaa vppglsafth
       61 aldismnnit rlpedafknf pyleelrlag ndltfihpka lsglkelkvl tlqnnqlktv
      121 pneairglsg lqslrldanh itaipedsfe gllqlrhlwl ddnsltevpi splsnlpslq
      181 altlalnrit hipdyaftnl sslvvlhlhn nkiktigkhc fdgldnletl dlnynnmvef
      241 peaikalpsl kelgfhsnyi siipdgafag npllrtihly dnplsfvgns afqnlsdlhs
      301 lvirgasmvq wfpnltgtvn lesltltgtk insipvnlcq eqkvlrtldl synnikdlps
      361 fkgchtleei slqhnqihei aedtfqglss lrvldlsrnr ihqihkgafi tvgallnldl
      421 sfnelsavpa eglsglnqlk ltgnselkea laaknfaklr slsvpyayqc cafwgcdsyl
      481 nsnaedsshq dqgalvdhek anadivrnek neelgqtiih ctpatgafkp ceyllgswmi
      541 rltvwfiflv alffnllvml tifascttlp ssklfislis vsnlfmgvyt giltfldavs
      601 wgrfaefgiw wetgsgcria gflavfsses aifflmlaav erslsakefi kkgksnrqkq
      661 fqiaaffafl calvagclpl fykaeysasp lclpfptget pllgftvtlv llnslafllm
      721 aviytklycn lekedlsens qsstikhvaw liftnciffc pvaffsfapl itaisispei
      781 mksvtliffp lpaclnpvly vffnpkfked wkllrrhlsr rsgaaamaag apgdaaqdly
      841 ydcgiyshlq ggnvalcecc eslllskpvp ckhlmkshsc palavvpcpr pdgswsdcgt
      901 psahsdyvde ddsfvsdssd qvqacgracf yqsrgfplvr yayniprikd
//
LOCUS       XP_041341012             927 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing G-protein coupled receptor 4 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041341012
VERSION     XP_041341012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..927
                     /product="leucine-rich repeat-containing G-protein coupled
                     receptor 4 isoform X2"
                     /calculated_mol_wt=101768
     Region          62..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          67..402
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          83..106
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          107..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          179..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          227..249
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          250..273
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          274..295
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          298..321
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          322..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          344..367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          368..391
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          392..415
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          515..788
                     /region_name="7tmA_LGR4"
                     /note="leucine-rich repeats-containing G protein-coupled
                     receptor 4, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15361"
                     /db_xref="CDD:320483"
     Region          516..542
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320483"
     Region          549..574
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320483"
     Site            order(570,573..574,594..599,601..602,605,650,652..656,678,
                     681..683,685..687,689..690,736,739..740,742..743,746,
                     755..756,758..760,763,766..767)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320483"
     Region          594..624
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320483"
     Region          636..658
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320483"
     Region          678..707
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320483"
     Region          716..746
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320483"
     Region          756..781
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320483"
     CDS             1..927
                     /gene="LGR4"
                     /coded_by="XM_041485078.1:358..3141"
                     /db_xref="GeneID:121363037"
ORIGIN      
        1 mrclallglv awglgswagh sggaspppcp apcscdgdrg vdcsgrglaa vppglsafth
       61 aldismnnit rlpedafknf pyleelrlag ndltfihpka lsglkelkvl tlqnnqlktv
      121 pneairglsg lqslrldanh itaipedsfe gllqlrhlwl ddnsltevpi splsnlpslq
      181 altlalnrit hipdyaftnl sslvvlhlhn nkiktigkhc fdgldnletl dlnynnmvef
      241 peaikalpsl kelgfhsnyi siipdgafag npllrtihly dnplsfvgns afqnlsdlhs
      301 ltltgtkins ipvnlcqeqk vlrtldlsyn nikdlpsfkg chtleeislq hnqiheiaed
      361 tfqglsslrv ldlsrnrihq ihkgafitvg allnldlsfn elsavpaegl sglnqlkltg
      421 nselkealaa knfaklrsls vpyayqccaf wgcdsylnsn aedsshqdqg alvdhekana
      481 divrneknee lgqtiihctp atgafkpcey llgswmirlt vwfiflvalf fnllvmltif
      541 ascttlpssk lfislisvsn lfmgvytgil tfldavswgr faefgiwwet gsgcriagfl
      601 avfssesaif flmlaavers lsakefikkg ksnrqkqfqi aaffaflcal vagclplfyk
      661 aeysasplcl pfptgetpll gftvtlvlln slafllmavi ytklycnlek edlsensqss
      721 tikhvawlif tnciffcpva ffsfaplita isispeimks vtliffplpa clnpvlyvff
      781 npkfkedwkl lrrhlsrrsg aaamaagapg daaqdlyydc giyshlqggn valceccesl
      841 llskpvpckh lmkshscpal avvpcprpdg swsdcgtpsa hsdyvdedds fvsdssdqvq
      901 acgracfyqs rgfplvryay niprikd
//
LOCUS       XP_041341025             131 aa            linear   VRT 06-MAY-2021
DEFINITION  follitropin subunit beta [Pyrgilauda ruficollis].
ACCESSION   XP_041341025
VERSION     XP_041341025.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485091.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="follitropin subunit beta"
                     /calculated_mol_wt=14487
     Region          17..123
                     /region_name="GHB"
                     /note="Glycoprotein hormone beta chain homologues;
                     smart00068"
                     /db_xref="CDD:214502"
     Site            order(21,46,50,69,100,102)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:200450"
     Site            order(28,31,45..58,68..69,105,107,110..115)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:200450"
     Site            order(58,107..108,111,113..115)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:200450"
     CDS             1..131
                     /gene="FSHB"
                     /coded_by="XM_041485091.1:1..396"
                     /db_xref="GeneID:121363047"
ORIGIN      
        1 mktlncyvll lcwkaiccns cqltnitiav ereecefcit vnatwcsgyc ftkdpvykyp
       61 pvstaqqtct fkevvyetvk ipgcgdhpes fysypvatec hcdscdtdtt dctvrglgps
      121 ycsfsqngsn q
//
LOCUS       XP_041341037             469 aa            linear   VRT 06-MAY-2021
DEFINITION  12S rRNA N4-methylcytidine (m4C) methyltransferase isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041341037
VERSION     XP_041341037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..469
                     /product="12S rRNA N4-methylcytidine (m4C)
                     methyltransferase isoform X1"
                     /calculated_mol_wt=51187
     Region          134..469
                     /region_name="RmsH"
                     /note="16S rRNA C1402 N4-methylase RsmH [Translation,
                     ribosomal structure and biogenesis]; COG0275"
                     /db_xref="CDD:440044"
     CDS             1..469
                     /gene="METTL15"
                     /coded_by="XM_041485103.1:13..1422"
                     /db_xref="GeneID:121363053"
ORIGIN      
        1 mcrraggggr erspsrcpgq grdggtaglg rcspsaegpg regagerart rrgwrefsrl
       61 inskmlpqnl cqvrkclflr nlklnsvsva glvrrihsss eklsdsesee qtvlkcetee
      121 lpqntengns grlhvpvmle evvnclspqp gqrfldmtfg agghtaalle rarditvyal
      181 drdptahsma qqlaeaypkq lqpllgrfsq seallissgv epgtldgvll dagcssmqld
      241 tpergfslqk dgpldmrmdh drcpamataa dvvnaleqra lasvlsayge erharriasa
      301 ivqarsiypi trtrqlasiv agafpvsaly arkdllqrpv hvatktfqgl rifvndelhe
      361 lliglktaek flrpggrlva lsfhsledri ikrflhgidv tekynlgskq kirqalksas
      421 kgqdtqgspc gksnskwisi qkkvltpqak diqtnprgrs aklraaikl
//
LOCUS       XP_041341046             405 aa            linear   VRT 06-MAY-2021
DEFINITION  12S rRNA N4-methylcytidine (m4C) methyltransferase isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041341046
VERSION     XP_041341046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485112.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="12S rRNA N4-methylcytidine (m4C)
                     methyltransferase isoform X2"
                     /calculated_mol_wt=44431
     Region          70..405
                     /region_name="RmsH"
                     /note="16S rRNA C1402 N4-methylase RsmH [Translation,
                     ribosomal structure and biogenesis]; COG0275"
                     /db_xref="CDD:440044"
     CDS             1..405
                     /gene="METTL15"
                     /coded_by="XM_041485112.1:167..1384"
                     /db_xref="GeneID:121363053"
ORIGIN      
        1 mlpqnlcqvr kclflrnlkl nsvsvaglvr rihsssekls dseseeqtvl kceteelpqn
       61 tengnsgrlh vpvmleevvn clspqpgqrf ldmtfgaggh taallerard itvyaldrdp
      121 tahsmaqqla eaypkqlqpl lgrfsqseal lissgvepgt ldgvlldagc ssmqldtper
      181 gfslqkdgpl dmrmdhdrcp amataadvvn aleqralasv lsaygeerha rriasaivqa
      241 rsiypitrtr qlasivagaf pvsalyarkd llqrpvhvat ktfqglrifv ndelhellig
      301 lktaekflrp ggrlvalsfh sledriikrf lhgidvteky nlgskqkirq alksaskgqd
      361 tqgspcgksn skwisiqkkv ltpqakdiqt nprgrsaklr aaikl
//
LOCUS       XP_041341058             259 aa            linear   VRT 06-MAY-2021
DEFINITION  ARL14 effector protein [Pyrgilauda ruficollis].
ACCESSION   XP_041341058
VERSION     XP_041341058.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485124.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="ARL14 effector protein"
                     /calculated_mol_wt=29510
     Region          145..248
                     /region_name="ARF7EP_C"
                     /note="ARF7 effector protein C-terminus; pfam14949"
                     /db_xref="CDD:464395"
     CDS             1..259
                     /gene="LOC121363063"
                     /coded_by="XM_041485124.1:449..1228"
                     /db_xref="GeneID:121363063"
ORIGIN      
        1 mdpcsvgvql qatnechkiy ytrhtgfktk qdisssdlll lqlrtgitls ennticlhha
       61 kvyierfedl qksccdpfni hrkvskknlr aidlddaafl sakfgrqfvp gwklcpkcmq
      121 iingnvdvep eerqrrrldp dgrtakalks lqfanpgrqt eftpetskre krrqtkisvf
      181 nsdrqvipak skvydsqgll lysgmdlcdc ldedclgcfy acpkcgsnkc gtecrcdrkw
      241 lyeqieiegg eiirnkhmg
//
LOCUS       XP_041341067             259 aa            linear   VRT 06-MAY-2021
DEFINITION  ARL14 effector protein [Pyrgilauda ruficollis].
ACCESSION   XP_041341067
VERSION     XP_041341067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="ARL14 effector protein"
                     /calculated_mol_wt=29510
     Region          145..248
                     /region_name="ARF7EP_C"
                     /note="ARF7 effector protein C-terminus; pfam14949"
                     /db_xref="CDD:464395"
     CDS             1..259
                     /gene="LOC121363063"
                     /coded_by="XM_041485133.1:214..993"
                     /db_xref="GeneID:121363063"
ORIGIN      
        1 mdpcsvgvql qatnechkiy ytrhtgfktk qdisssdlll lqlrtgitls ennticlhha
       61 kvyierfedl qksccdpfni hrkvskknlr aidlddaafl sakfgrqfvp gwklcpkcmq
      121 iingnvdvep eerqrrrldp dgrtakalks lqfanpgrqt eftpetskre krrqtkisvf
      181 nsdrqvipak skvydsqgll lysgmdlcdc ldedclgcfy acpkcgsnkc gtecrcdrkw
      241 lyeqieiegg eiirnkhmg
//
LOCUS       XP_041341081             654 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium voltage-gated channel subfamily A member 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041341081
VERSION     XP_041341081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..654
                     /product="potassium voltage-gated channel subfamily A
                     member 4"
                     /calculated_mol_wt=73191
     Region          1..>37
                     /region_name="K_channel_TID"
                     /note="Potassium channel Kv1.4 tandem inactivation domain;
                     pfam07941"
                     /db_xref="CDD:429748"
     Region          186..313
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          316..571
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..654
                     /gene="KCNA4"
                     /coded_by="XM_041485147.1:1399..3363"
                     /db_xref="GeneID:121363073"
ORIGIN      
        1 mevamvsads sgcnthmpyg yaaqararer erlaqsraaa aaavaaataa veggaagggg
       61 pyhhyhqeqa rgasssrggl prrqsgkrrk kgkkrshhlg srecgasfpc sellplsgse
      121 erilkdlsee eeedededed deeegklyys ddygedefsy sdqppddggg pggygsvrys
      181 eyeccervvi nvsglrfetq lktlaqfpet llgdpakrgr yfdplrneyf fdrnrpsfda
      241 ilyyyqsggr lkrpvnvpfd ifseevkfyq lgeeamlkfr edegfvkeee ekvlpenefk
      301 rqvwllfeyp essspargia ivsvlvilis ivifcletlp efrddkefvm slslgkglsn
      361 eslrldageh tifndpffiv etvciiwfsf eftvrcfacp skahffknvm niidivsilp
      421 yfitlgtdla qeqgsqqams failriirlv rvfrifklsr hskglqilgh tlrasmrelg
      481 llifflfigv ilfssavyfa eadepathfq sipdafwwav vtmttvgygd mkpitvggki
      541 vgslcaiagv ltialpvpvi vsnfnyfyhr eteneehtqm mqnavscpyl ptnllkkfrs
      601 asssstedks eylemeegvk eslcvketks qdtgnssese kkncvnsnsv etdv
//
LOCUS       XP_041341095             294 aa            linear   VRT 06-MAY-2021
DEFINITION  metallophosphoesterase MPPED2 [Pyrgilauda ruficollis].
ACCESSION   XP_041341095
VERSION     XP_041341095.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485161.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="metallophosphoesterase MPPED2"
                     /calculated_mol_wt=33202
     Region          59..271
                     /region_name="MPP_239FB"
                     /note="Homo sapiens 239FB and related proteins,
                     metallophosphatase domain; cd07379"
                     /db_xref="CDD:277325"
     Site            order(65,67,86,117..118,213,252,254)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277325"
     Site            order(65,67,86,117,213,252,254)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277325"
     CDS             1..294
                     /gene="MPPED2"
                     /coded_by="XM_041485161.1:215..1099"
                     /db_xref="GeneID:121363079"
ORIGIN      
        1 mahgipsqgk vtitvdeyss nptqafthyn inqsrfqpph vhmvdpipyd tpkpaghtrf
       61 vcvsdthsrt dgiqmpygdi llhtgdftel glpsevkkfn dwlgnlpyey kiviagnhel
      121 tfdkefmadl vkqdyyrfps vsklkpedfd nvqslltnsi ylqdsevtvk gfriygapwt
      181 pwfngwgfnl prgqslldkw nlipegidil mthgpplgfr dwvpkelqrv gcvellntvq
      241 rrvrpklhvf ggihegygim tdgyttyina stctvsfqpt nppiifdlpt pqgs
//
LOCUS       XP_041341103             294 aa            linear   VRT 06-MAY-2021
DEFINITION  metallophosphoesterase MPPED2 [Pyrgilauda ruficollis].
ACCESSION   XP_041341103
VERSION     XP_041341103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="metallophosphoesterase MPPED2"
                     /calculated_mol_wt=33202
     Region          59..271
                     /region_name="MPP_239FB"
                     /note="Homo sapiens 239FB and related proteins,
                     metallophosphatase domain; cd07379"
                     /db_xref="CDD:277325"
     Site            order(65,67,86,117..118,213,252,254)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277325"
     Site            order(65,67,86,117,213,252,254)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277325"
     CDS             1..294
                     /gene="MPPED2"
                     /coded_by="XM_041485169.1:151..1035"
                     /db_xref="GeneID:121363079"
ORIGIN      
        1 mahgipsqgk vtitvdeyss nptqafthyn inqsrfqpph vhmvdpipyd tpkpaghtrf
       61 vcvsdthsrt dgiqmpygdi llhtgdftel glpsevkkfn dwlgnlpyey kiviagnhel
      121 tfdkefmadl vkqdyyrfps vsklkpedfd nvqslltnsi ylqdsevtvk gfriygapwt
      181 pwfngwgfnl prgqslldkw nlipegidil mthgpplgfr dwvpkelqrv gcvellntvq
      241 rrvrpklhvf ggihegygim tdgyttyina stctvsfqpt nppiifdlpt pqgs
//
LOCUS       XP_041341116             388 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-butyrobetaine dioxygenase [Pyrgilauda ruficollis].
ACCESSION   XP_041341116
VERSION     XP_041341116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="gamma-butyrobetaine dioxygenase"
                     /calculated_mol_wt=44150
     Region          16..381
                     /region_name="CAS_like"
                     /note="Clavaminic acid synthetase (CAS) -like; CAS is a
                     trifunctional Fe(II)/ 2-oxoglutarate (2OG) oxygenase
                     carrying out three reactions in the biosynthesis of
                     clavulanic acid, an inhibitor of class A serine
                     beta-lactamases. In general, Fe(II)-2OG oxygenases...;
                     cl00184"
                     /db_xref="CDD:444731"
     Site            order(172..173,206,208,213,263,365,367)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238154"
     Site            order(203,205,230,348,361)
                     /site_type="active"
                     /db_xref="CDD:238154"
     Site            order(203,205,348)
                     /site_type="other"
                     /note="iron coordination sites [ion binding]"
                     /db_xref="CDD:238154"
     CDS             1..388
                     /gene="BBOX1"
                     /coded_by="XM_041485182.1:108..1274"
                     /db_xref="GeneID:121363090"
ORIGIN      
        1 msaavrrvra agggrlvcvq wedgsessyp cvwlrdscqc prcflpsaga rrlllehldv
       61 divvkevala ggekisitwp dehtseyeae wlkkrcfsee aravmradlf lperqywgsd
      121 lqlpkipfee imsndesayk wlctlkkvgi vlltgaatrq gelvrlgnri gflrltfygp
      181 twqvqdkada nnvaytterl cfhtdypvlq hppgvqflhc ikqtdagges evvdgfhvsn
      241 klkkqnpeay qilsstavdy tdvgvdycdf avhckqriid tdsrgqairi nfnnatrdtv
      301 fdipvekvrp fyaalkefnd llnstehkft fkmkpgdilt fdnwrvlhgr qsypscsevt
      361 rhlegayadw dvvmsrlqll rkrvlnrd
//
LOCUS       XP_041341129             310 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 34 [Pyrgilauda ruficollis].
ACCESSION   XP_041341129
VERSION     XP_041341129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485195.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="coiled-coil domain-containing protein 34"
                     /calculated_mol_wt=35657
     Region          <79..258
                     /region_name="CCDC34"
                     /note="Coiled-coil domain-containing protein 3; pfam13904"
                     /db_xref="CDD:464032"
     CDS             1..310
                     /gene="CCDC34"
                     /coded_by="XM_041485195.1:54..986"
                     /db_xref="GeneID:121363095"
ORIGIN      
        1 msggasrrsp plaegelpps psegsplsla srgsspgree peqeraeapg gswsppghrr
       61 aehsetaggr kasplkdnls pweewfigke kelrarlqar aaeemskqle emkqnqewer
      121 rkriaeekhk ewvlkkreee rrerkrklsk emaekatrel ekmqlkekad vkykewlekk
      181 raeeaekkkk ekekekerea eqqekrirse kifkewlqna rnkpqpalng ygfphgrstg
      241 sadrnlypap aycnpipwkp vhvplpkedr vltmkksqrp vscqphaalp vvfskprsnp
      301 ctgslcrkkl
//
LOCUS       XP_041341141             603 aa            linear   VRT 06-MAY-2021
DEFINITION  basic proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041341141
VERSION     XP_041341141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041485207.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024510099.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..603
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..603
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=62639
     CDS             1..603
                     /gene="LOC121363103"
                     /coded_by="XM_041485207.1:1..1812"
                     /db_xref="GeneID:121363103"
ORIGIN      
        1 mdqpmvegyf qdeqlrkgpv ygagpqlgha vlaawtrsrl lpfrsvylyr qqdrrcaivh
       61 paqryrykpa lfrnragpna gaancepvhc rpvkklprnl hswaralaen aerqepgrvn
      121 pvstpsgdpy aipalfrrhg sctrppgaap gprsprhprc apgpggaasa prdaalqfad
      181 nsalhyppsp aeapgagprl spapfprrrp pprasaagpg rggggrcppl fiaavptphr
      241 apnpckaskc lrppgsgfqs gfsagerarg nsagerranp pfppyfcgvp pplapipgsl
      301 ipapagllga apagcrppag psqhkaprpt lpappppppa pgrrrpaapa pgrtaaegsg
      361 gtawaaeqgr aaslsaadia awaagkrrcr rtdptrpdpa gsgghgggag aafilsivcg
      421 rldrrrrrss ppppppprpr happhpprpg qslrptprrr paaalapapg paalrlrerq
      481 rgggeggrga vigaatgvre qapgntaata llahtrthte trtappaash ftppgreggs
      541 erallhfpsa aqaphagarl slpgsqsrsp pgppprqgaa prslahrhgr priaerlvrc
      601 ppr
//
LOCUS       XP_041322059              91 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor RelB homolog, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322059
VERSION     XP_041322059.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466125.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519129.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..91
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>91
                     /product="transcription factor RelB homolog"
     Region          <17..91
                     /region_name="RHD-n"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD); cl08275"
                     /db_xref="CDD:447596"
     CDS             1..91
                     /gene="LOC121352844"
                     /coded_by="XM_041466125.1:<1..>276"
                     /codon_start=3
                     /db_xref="GeneID:121352844"
ORIGIN      
        1 gfqkgpkkfg nfgvpgsfsn lgiqcvkkke iegaiekklq lgidpfkags lrnhqevdln
       61 vvricfqasf rdragiprsl spvlsqpifd k
//
LOCUS       XP_041322060             147 aa            linear   VRT 06-MAY-2021
DEFINITION  CLK4-associating serine/arginine rich protein-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322060
VERSION     XP_041322060.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466126.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519162.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..147
                     /product="CLK4-associating serine/arginine rich
                     protein-like"
     Region          33..147
                     /region_name="DRY_EERY"
                     /note="Alternative splicing regulator; pfam09750"
                     /db_xref="CDD:462881"
     CDS             1..147
                     /gene="LOC121352845"
                     /coded_by="XM_041466126.1:<1..445"
                     /codon_start=2
                     /db_xref="GeneID:121352845"
ORIGIN      
        1 fptifpltfp rfplslipgf srfsqkkdpa qflqvhgrac kvhldsaval aaespvnmmp
       61 wqgdtnnmid rfdvrahldf ipmytpalls ptspeqesde rkcnyeryrg lvqndfagis
      121 eeqclyqiyi delygglqkp nedekkk
//
LOCUS       XP_041322061             433 aa            linear   VRT 06-MAY-2021
DEFINITION  cysteine protease ATG4D-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322061
VERSION     XP_041322061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466127.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519184.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>433
                     /product="cysteine protease ATG4D-like"
     Region          32..>72
                     /region_name="Peptidase_C54"
                     /note="Peptidase family C54; pfam03416"
                     /db_xref="CDD:460915"
     Region          <97..311
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <312..398
                     /region_name="Peptidase_C54"
                     /note="Peptidase family C54; pfam03416"
                     /db_xref="CDD:460915"
     CDS             1..433
                     /gene="LOC121352846"
                     /coded_by="XM_041466127.1:1..>1299"
                     /db_xref="GeneID:121352846"
ORIGIN      
        1 mghrdtrqqd tgrglpghrt aslapspedl arfrrdfcsr lwltyrsgfp alpgtprttd
       61 cgwgctlrsa qmllgqglll hllgrdwvwp eallelepgg srrsrdpqgr trdppgrtrp
      121 prdgprvprd grgsprrtrd plgwsqdppg rsqdppgwtr ppqngqgppr mdagpprmdt
      181 ersrgtrdpq grardplera rdpsrqprdp pgqpldpsgq pqdpleraqd plerawdplg
      241 qprdpsgqpr dplagwtrna pggrgtprdg hgtpwnghgt prdspgtprd spgtpwnghl
      301 afpgvtacpp rqellqlrsc lgiiggkprh slfflgfqgd sllyldphlc qpcvdttren
      361 fplqsfhccf prkmsfgkmd psctfgfyar gteleqlwgd larvlappry piftlaegha
      421 qdqaldappa ppp
//
LOCUS       XP_041322062             275 aa            linear   VRT 06-MAY-2021
DEFINITION  transformer-2 protein homolog alpha isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322062
VERSION     XP_041322062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466128.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="transformer-2 protein homolog alpha isoform X1"
                     /calculated_mol_wt=32109
     Region          118..197
                     /region_name="RRM_TRA2"
                     /note="RNA recognition motif (RRM) found in transformer-2
                     protein homolog TRA2-alpha, TRA2-beta and similar
                     proteins; cd12363"
                     /db_xref="CDD:409798"
     Site            order(120,124..125,149,151,160,162,164,166,188..191,
                     194..197)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409798"
     CDS             1..275
                     /gene="TRA2A"
                     /coded_by="XM_041466128.1:229..1056"
                     /db_xref="GeneID:121352849"
ORIGIN      
        1 msdveennfe gresrsqsks pagsparvks esrsgsrsps raskhseshs rsrsksrsrs
       61 rrhshrrytr srshshshrr rsrsrsytpe yrrrrsrshs pmsnrrrhtg sranpdpntc
      121 lgvfglslyt terdlrevfs rygpltgvnv vydqrtgrsr gfafvyferi ddskeameha
      181 ngmeldgrri rvdysitkra htptpgiymg rpthsggggg ggagrrrdsy ydrgydrgyd
      241 ryeeydyryr rrspspyysr yrsrsrsrsy sprry
//
LOCUS       XP_041322063             274 aa            linear   VRT 06-MAY-2021
DEFINITION  transformer-2 protein homolog alpha isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322063
VERSION     XP_041322063.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466129.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="transformer-2 protein homolog alpha isoform X2"
                     /calculated_mol_wt=32022
     Region          118..197
                     /region_name="RRM_TRA2"
                     /note="RNA recognition motif (RRM) found in transformer-2
                     protein homolog TRA2-alpha, TRA2-beta and similar
                     proteins; cd12363"
                     /db_xref="CDD:409798"
     Site            order(120,124..125,149,151,160,162,164,166,188..191,
                     194..197)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409798"
     CDS             1..274
                     /gene="TRA2A"
                     /coded_by="XM_041466129.1:229..1053"
                     /db_xref="GeneID:121352849"
ORIGIN      
        1 msdveennfe gresrsqsks pagsparvks esrsgsrsps raskhseshs rsrsksrsrs
       61 rrhshrrytr srshshshrr rsrsrsytpe yrrrrsrshs pmsnrrrhtg sranpdpntc
      121 lgvfglslyt terdlrevfs rygpltgvnv vydqrtgrsr gfafvyferi ddskeameha
      181 ngmeldgrri rvdysitkra htptpgiymg rpthgggggg gagrrrdsyy drgydrgydr
      241 yeeydyryrr rspspyysry rsrsrsrsys prry
//
LOCUS       XP_041322064             273 aa            linear   VRT 06-MAY-2021
DEFINITION  transformer-2 protein homolog alpha isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322064
VERSION     XP_041322064.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466130.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="transformer-2 protein homolog alpha isoform X3"
                     /calculated_mol_wt=31866
     Region          116..195
                     /region_name="RRM_TRA2"
                     /note="RNA recognition motif (RRM) found in transformer-2
                     protein homolog TRA2-alpha, TRA2-beta and similar
                     proteins; cd12363"
                     /db_xref="CDD:409798"
     Site            order(118,122..123,147,149,158,160,162,164,186..189,
                     192..195)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409798"
     CDS             1..273
                     /gene="TRA2A"
                     /coded_by="XM_041466130.1:229..1050"
                     /db_xref="GeneID:121352849"
ORIGIN      
        1 msdveennfe gresrsqsks pagsparvks esrsgsrsps raskhseshs rsrsksrsrr
       61 hshrrytrsr shshshrrrs rsrsytpeyr rrrsrshspm snrrrhtgsr anpdpntclg
      121 vfglslytte rdlrevfsry gpltgvnvvy dqrtgrsrgf afvyferidd skeamehang
      181 meldgrrirv dysitkraht ptpgiymgrp thsggggggg agrrrdsyyd rgydrgydry
      241 eeydyryrrr spspyysryr srsrsrsysp rry
//
LOCUS       XP_041322065             174 aa            linear   VRT 06-MAY-2021
DEFINITION  transformer-2 protein homolog alpha isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322065
VERSION     XP_041322065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="transformer-2 protein homolog alpha isoform X4"
                     /calculated_mol_wt=20238
     Region          17..96
                     /region_name="RRM_TRA2"
                     /note="RNA recognition motif (RRM) found in transformer-2
                     protein homolog TRA2-alpha, TRA2-beta and similar
                     proteins; cd12363"
                     /db_xref="CDD:409798"
     Site            order(19,23..24,48,50,59,61,63,65,87..90,93..96)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409798"
     CDS             1..174
                     /gene="TRA2A"
                     /coded_by="XM_041466131.1:827..1351"
                     /db_xref="GeneID:121352849"
ORIGIN      
        1 msnrrrhtgs ranpdpntcl gvfglslytt erdlrevfsr ygpltgvnvv ydqrtgrsrg
       61 fafvyferid dskeamehan gmeldgrrir vdysitkrah tptpgiymgr pthsgggggg
      121 gagrrrdsyy drgydrgydr yeeydyryrr rspspyysry rsrsrsrsys prry
//
LOCUS       XP_041322066             174 aa            linear   VRT 06-MAY-2021
DEFINITION  transformer-2 protein homolog alpha isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322066
VERSION     XP_041322066.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466132.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="transformer-2 protein homolog alpha isoform X4"
                     /calculated_mol_wt=20238
     Region          17..96
                     /region_name="RRM_TRA2"
                     /note="RNA recognition motif (RRM) found in transformer-2
                     protein homolog TRA2-alpha, TRA2-beta and similar
                     proteins; cd12363"
                     /db_xref="CDD:409798"
     Site            order(19,23..24,48,50,59,61,63,65,87..90,93..96)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409798"
     CDS             1..174
                     /gene="TRA2A"
                     /coded_by="XM_041466132.1:375..899"
                     /db_xref="GeneID:121352849"
ORIGIN      
        1 msnrrrhtgs ranpdpntcl gvfglslytt erdlrevfsr ygpltgvnvv ydqrtgrsrg
       61 fafvyferid dskeamehan gmeldgrrir vdysitkrah tptpgiymgr pthsgggggg
      121 gagrrrdsyy drgydrgydr yeeydyryrr rspspyysry rsrsrsrsys prry
//
LOCUS       XP_041322068            1247 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322068
VERSION     XP_041322068.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466134.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1247
                     /product="sodium bicarbonate cotransporter 3 isoform X1"
                     /calculated_mol_wt=139142
     Region          116..1134
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1247
                     /gene="SLC4A7"
                     /coded_by="XM_041466134.1:170..3913"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 gkkhsdphll erngeglsas rhslrtglsa snlslrgdsr lsvllsyllp ssragtpaas
      301 rcttpvttpq ntppssptcs pttsaqpspl qgkellvspa sddipsvvih ppeedlevqd
      361 sqekkteeni gktpgllasp qsapgnldtg ksgdvkgtgt ggsrenstvd fskvdmnfmr
      421 kipsgaeasn vlvgevdfle rpiiafvrls pavllsglte vpvptrflfl llgpagkapq
      481 yheigrsiat lmtddvfhdv aykakdrndl lsgidefldq vtvlppgewd psirieppks
      541 vpsqekrkap kfpngstptg eglkeeghha gpelqrtgrl fgglildikr kapfflsdfk
      601 dalslqclas ilflycacms pvitfggllg eatqgrisai eslfgasltg iayslfagqp
      661 ltilgstgpv lvfekilfkf crdyglsyls lrtciglwta flcivlvatd asslvcyitr
      721 fteeafaali ciifiyeale klvhlgevyp fnmhndlnkl tsyscvcsep ekpnnetlrv
      781 wrtmnksged iawnnltvse cleyhgvfrg sacghhgpyi pdvlfwsvil ffatfflssf
      841 lkkfktkryf ptkvrstisd favfltivim vlidylvgvp spklhvpekf eptrkdrgwf
      901 idplggnpww tlliaalpal lctilifmdq qitaviinrk ehklkkgcgy hldllmvgim
      961 lgicsvmglp wfvaatvlsi shvnslkves ecsapgeqpk flgireqrvt glmifvlmgm
     1021 svsmtsvlkf ipmpvlygvf lymgvsslkg iqffdriklf gmpakhqpdl iylryvplwk
     1081 vhiftvvqlt clvllwvika saaavvfpmm vlalvfirkl mdlcftkkel swlddlmpes
     1141 kkkteddeki kekeeaermf sdhdsvhlay geanlefpvk slkysidpsv vnisdemakt
     1201 aqwkalamst enakvtranl spekpesvki evekspvvry vdaetsl
//
LOCUS       XP_041322069            1243 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322069
VERSION     XP_041322069.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466135.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1243
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1243
                     /product="sodium bicarbonate cotransporter 3 isoform X2"
                     /calculated_mol_wt=138684
     Region          112..1130
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1243
                     /gene="SLC4A7"
                     /coded_by="XM_041466135.1:109..3840"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meearqgkkm qpghdeeavv dmgkisstin tnfekeeles hravyigvhv plgkpgrrrh
       61 rhrghrhhrr kreketdred grespsydtp sqrvqfilgt edddehiphd lftemdelcf
      121 rdgeeyewre tarwlkfeed vedggdrwsk pyvatlslhs lfelrsciln gtvmldmran
      181 tldeiadmvl dnmiasgqld esirenvrea llkrhhhqne kkfssriplv rsfadigkkh
      241 sdphllerng eglsasrhsl rtglsasnls lrgdsrlsvl lsyllpssra gtpaasrctt
      301 pvttpqntpp ssptcsptts aqpsplqgke llvspasddi psvvihppee dlevqdsqek
      361 kteenigktp gllaspqsap gnldtgksgd vkgtgtggsr enstvdfskv dmnfmrkips
      421 gaeasnvlvg evdflerpii afvrlspavl lsgltevpvp trflflllgp agkapqyhei
      481 grsiatlmtd dvfhdvayka kdrndllsgi defldqvtvl ppgewdpsir ieppksvpsq
      541 ekrkapkfpn gstptgeglk eeghhagpel qrtgrlfggl ildikrkapf flsdfkdals
      601 lqclasilfl ycacmspvit fggllgeatq grisaieslf gasltgiays lfagqpltil
      661 gstgpvlvfe kilfkfcrdy glsylslrtc iglwtaflci vlvatdassl vcyitrftee
      721 afaaliciif iyealeklvh lgevypfnmh ndlnkltsys cvcsepekpn netlrvwrtm
      781 nksgediawn nltvsecley hgvfrgsacg hhgpyipdvl fwsvilffat fflssflkkf
      841 ktkryfptkv rstisdfavf ltivimvlid ylvgvpspkl hvpekfeptr kdrgwfidpl
      901 ggnpwwtlli aalpallcti lifmdqqita viinrkehkl kkgcgyhldl lmvgimlgic
      961 svmglpwfva atvlsishvn slkvesecsa pgeqpkflgi reqrvtglmi fvlmgmsvsm
     1021 tsvlkfipmp vlygvflymg vsslkgiqff driklfgmpa khqpdliylr yvplwkvhif
     1081 tvvqltclvl lwvikasaaa vvfpmmvlal vfirklmdlc ftkkelswld dlmpeskkkt
     1141 eddekikeke eaermfsdhd svhlaygean lefpvkslky sidpsvvnis demaktaqwk
     1201 alamstenak vtranlspek pesvkievek spvvryvdae tsl
//
LOCUS       XP_041322070            1234 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322070
VERSION     XP_041322070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1234
                     /product="sodium bicarbonate cotransporter 3 isoform X3"
                     /calculated_mol_wt=137629
     Region          116..1121
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1234
                     /gene="SLC4A7"
                     /coded_by="XM_041466136.1:170..3874"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 geglsasrhs lrtglsasnl slrgdsrlsv llsyllpssr agtpaasrct tpvttpqntp
      301 pssptcsptt saqpsplqgk ellvspasdd ipsvvihppe edlevqdsqe kkteenigkt
      361 pgllaspqsa pgnldtgksg dvkgtgtggs renstvdfsk vdmnfmrkip sgaeasnvlv
      421 gevdflerpi iafvrlspav llsgltevpv ptrflflllg pagkapqyhe igrsiatlmt
      481 ddvfhdvayk akdrndllsg idefldqvtv lppgewdpsi rieppksvps qekrkapkfp
      541 ngstptgegl keeghhagpe lqrtgrlfgg lildikrkap fflsdfkdal slqclasilf
      601 lycacmspvi tfggllgeat qgrisaiesl fgasltgiay slfagqplti lgstgpvlvf
      661 ekilfkfcrd yglsylslrt ciglwtaflc ivlvatdass lvcyitrfte eafaalicii
      721 fiyealeklv hlgevypfnm hndlnkltsy scvcsepekp nnetlrvwrt mnksgediaw
      781 nnltvsecle yhgvfrgsac ghhgpyipdv lfwsvilffa tfflssflkk fktkryfptk
      841 vrstisdfav fltivimvli dylvgvpspk lhvpekfept rkdrgwfidp lggnpwwtll
      901 iaalpallct ilifmdqqit aviinrkehk lkkgcgyhld llmvgimlgi csvmglpwfv
      961 aatvlsishv nslkvesecs apgeqpkflg ireqrvtglm ifvlmgmsvs mtsvlkfipm
     1021 pvlygvflym gvsslkgiqf fdriklfgmp akhqpdliyl ryvplwkvhi ftvvqltclv
     1081 llwvikasaa avvfpmmvla lvfirklmdl cftkkelswl ddlmpeskkk teddekikek
     1141 eeaermfsdh dsvhlaygea nlefpvkslk ysidpsvvni sdemaktaqw kalamstena
     1201 kvtranlspe kpesvkieve kspvvryvda etsl
//
LOCUS       XP_041322071            1211 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322071
VERSION     XP_041322071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1211
                     /product="sodium bicarbonate cotransporter 3 isoform X4"
                     /calculated_mol_wt=135269
     Region          116..1134
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1211
                     /gene="SLC4A7"
                     /coded_by="XM_041466137.1:170..3805"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 gkkhsdphll erngeglsas rhslrtglsa snlslrgdsr lsvllsyllp ssragtpaas
      301 rcttpvttpq ntppssptcs pttsaqpspl qgkellvspa sddipsvvih ppeedlevqd
      361 sqekkteeni gktpgllasp qsapgnldtg ksgdvkgtgt ggsrenstvd fskvdmnfmr
      421 kipsgaeasn vlvgevdfle rpiiafvrls pavllsglte vpvptrflfl llgpagkapq
      481 yheigrsiat lmtddvfhdv aykakdrndl lsgidefldq vtvlppgewd psirieppks
      541 vpsqekrkap kfpngstptg eglkeeghha gpelqrtgrl fgglildikr kapfflsdfk
      601 dalslqclas ilflycacms pvitfggllg eatqgrisai eslfgasltg iayslfagqp
      661 ltilgstgpv lvfekilfkf crdyglsyls lrtciglwta flcivlvatd asslvcyitr
      721 fteeafaali ciifiyeale klvhlgevyp fnmhndlnkl tsyscvcsep ekpnnetlrv
      781 wrtmnksged iawnnltvse cleyhgvfrg sacghhgpyi pdvlfwsvil ffatfflssf
      841 lkkfktkryf ptkvrstisd favfltivim vlidylvgvp spklhvpekf eptrkdrgwf
      901 idplggnpww tlliaalpal lctilifmdq qitaviinrk ehklkkgcgy hldllmvgim
      961 lgicsvmglp wfvaatvlsi shvnslkves ecsapgeqpk flgireqrvt glmifvlmgm
     1021 svsmtsvlkf ipmpvlygvf lymgvsslkg iqffdriklf gmpakhqpdl iylryvplwk
     1081 vhiftvvqlt clvllwvika saaavvfpmm vlalvfirkl mdlcftkkel swlddlmpes
     1141 kkkteddeki kekeeaermf sdhdsvhlay geanlefpvk slkyspekpe svkieveksp
     1201 vvryvdaets l
//
LOCUS       XP_041322072            1203 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322072
VERSION     XP_041322072.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466138.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1203
                     /product="sodium bicarbonate cotransporter 3 isoform X5"
                     /calculated_mol_wt=134235
     Region          116..1134
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1203
                     /gene="SLC4A7"
                     /coded_by="XM_041466138.1:170..3781"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 gkkhsdphll erngeglsas rhslrtglsa snlslrgdsr lsvllsyllp ssragtpaas
      301 rcttpvttpq ntppssptcs pttsaqpspl qgkellvspa sddipsvvih ppeedlevqd
      361 sqekkteeni gktpgllasp qsapgnldtg ksgdvkgtgt ggsrenstvd fskvdmnfmr
      421 kipsgaeasn vlvgevdfle rpiiafvrls pavllsglte vpvptrflfl llgpagkapq
      481 yheigrsiat lmtddvfhdv aykakdrndl lsgidefldq vtvlppgewd psirieppks
      541 vpsqekrkap kfpngstptg eglkeeghha gpelqrtgrl fgglildikr kapfflsdfk
      601 dalslqclas ilflycacms pvitfggllg eatqgrisai eslfgasltg iayslfagqp
      661 ltilgstgpv lvfekilfkf crdyglsyls lrtciglwta flcivlvatd asslvcyitr
      721 fteeafaali ciifiyeale klvhlgevyp fnmhndlnkl tsyscvcsep ekpnnetlrv
      781 wrtmnksged iawnnltvse cleyhgvfrg sacghhgpyi pdvlfwsvil ffatfflssf
      841 lkkfktkryf ptkvrstisd favfltivim vlidylvgvp spklhvpekf eptrkdrgwf
      901 idplggnpww tlliaalpal lctilifmdq qitaviinrk ehklkkgcgy hldllmvgim
      961 lgicsvmglp wfvaatvlsi shvnslkves ecsapgeqpk flgireqrvt glmifvlmgm
     1021 svsmtsvlkf ipmpvlygvf lymgvsslkg iqffdriklf gmpakhqpdl iylryvplwk
     1081 vhiftvvqlt clvllwvika saaavvfpmm vlalvfirkl mdlcftkkel swlddlmpes
     1141 kkkteddeki kekeeaermf sdhdsvhlay geanlefpvk slkyrsddsi stsctkgeea
     1201 slp
//
LOCUS       XP_041322073            1203 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322073
VERSION     XP_041322073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466139.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1203
                     /product="sodium bicarbonate cotransporter 3 isoform X6"
                     /calculated_mol_wt=134275
     Region          116..1134
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1203
                     /gene="SLC4A7"
                     /coded_by="XM_041466139.1:170..3781"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 gkkhsdphll erngeglsas rhslrtglsa snlslrgdsr lsvllsyllp ssragtpaas
      301 rcttpvttpq ntppssptcs pttsaqpspl qgkellvspa sddipsvvih ppeedlevqd
      361 sqekkteeni gktpgllasp qsapgnldtg ksgdvkgtgt ggsrenstvd fskvdmnfmr
      421 kipsgaeasn vlvgevdfle rpiiafvrls pavllsglte vpvptrflfl llgpagkapq
      481 yheigrsiat lmtddvfhdv aykakdrndl lsgidefldq vtvlppgewd psirieppks
      541 vpsqekrkap kfpngstptg eglkeeghha gpelqrtgrl fgglildikr kapfflsdfk
      601 dalslqclas ilflycacms pvitfggllg eatqgrisai eslfgasltg iayslfagqp
      661 ltilgstgpv lvfekilfkf crdyglsyls lrtciglwta flcivlvatd asslvcyitr
      721 fteeafaali ciifiyeale klvhlgevyp fnmhndlnkl tsyscvcsep ekpnnetlrv
      781 wrtmnksged iawnnltvse cleyhgvfrg sacghhgpyi pdvlfwsvil ffatfflssf
      841 lkkfktkryf ptkvrstisd favfltivim vlidylvgvp spklhvpekf eptrkdrgwf
      901 idplggnpww tlliaalpal lctilifmdq qitaviinrk ehklkkgcgy hldllmvgim
      961 lgicsvmglp wfvaatvlsi shvnslkves ecsapgeqpk flgireqrvt glmifvlmgm
     1021 svsmtsvlkf ipmpvlygvf lymgvsslkg iqffdriklf gmpakhqpdl iylryvplwk
     1081 vhiftvvqlt clvllwvika saaavvfpmm vlalvfirkl mdlcftkkel swlddlmpes
     1141 kkkteddeki kekeeaermf sdhdsvhlay geanlefpvk slkyrsddsi stsctkgeea
     1201 slh
//
LOCUS       XP_041322074            1203 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322074
VERSION     XP_041322074.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466140.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1203
                     /product="sodium bicarbonate cotransporter 3 isoform X7"
                     /calculated_mol_wt=134334
     Region          116..1134
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1203
                     /gene="SLC4A7"
                     /coded_by="XM_041466140.1:170..3781"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 gkkhsdphll erngeglsas rhslrtglsa snlslrgdsr lsvllsyllp ssragtpaas
      301 rcttpvttpq ntppssptcs pttsaqpspl qgkellvspa sddipsvvih ppeedlevqd
      361 sqekkteeni gktpgllasp qsapgnldtg ksgdvkgtgt ggsrenstvd fskvdmnfmr
      421 kipsgaeasn vlvgevdfle rpiiafvrls pavllsglte vpvptrflfl llgpagkapq
      481 yheigrsiat lmtddvfhdv aykakdrndl lsgidefldq vtvlppgewd psirieppks
      541 vpsqekrkap kfpngstptg eglkeeghha gpelqrtgrl fgglildikr kapfflsdfk
      601 dalslqclas ilflycacms pvitfggllg eatqgrisai eslfgasltg iayslfagqp
      661 ltilgstgpv lvfekilfkf crdyglsyls lrtciglwta flcivlvatd asslvcyitr
      721 fteeafaali ciifiyeale klvhlgevyp fnmhndlnkl tsyscvcsep ekpnnetlrv
      781 wrtmnksged iawnnltvse cleyhgvfrg sacghhgpyi pdvlfwsvil ffatfflssf
      841 lkkfktkryf ptkvrstisd favfltivim vlidylvgvp spklhvpekf eptrkdrgwf
      901 idplggnpww tlliaalpal lctilifmdq qitaviinrk ehklkkgcgy hldllmvgim
      961 lgicsvmglp wfvaatvlsi shvnslkves ecsapgeqpk flgireqrvt glmifvlmgm
     1021 svsmtsvlkf ipmpvlygvf lymgvsslkg iqffdriklf gmpakhqpdl iylryvplwk
     1081 vhiftvvqlt clvllwvika saaavvfpmm vlalvfirkl mdlcftkkel swlddlmpes
     1141 kkkteddeki kekeeaermf sdhdsvhlay geanlefpvk slkyrsddsi stsctkalkn
     1201 qkv
//
LOCUS       XP_041322075            1198 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322075
VERSION     XP_041322075.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466141.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1198
                     /product="sodium bicarbonate cotransporter 3 isoform X8"
                     /calculated_mol_wt=133756
     Region          116..1121
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1198
                     /gene="SLC4A7"
                     /coded_by="XM_041466141.1:170..3766"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 geglsasrhs lrtglsasnl slrgdsrlsv llsyllpssr agtpaasrct tpvttpqntp
      301 pssptcsptt saqpsplqgk ellvspasdd ipsvvihppe edlevqdsqe kkteenigkt
      361 pgllaspqsa pgnldtgksg dvkgtgtggs renstvdfsk vdmnfmrkip sgaeasnvlv
      421 gevdflerpi iafvrlspav llsgltevpv ptrflflllg pagkapqyhe igrsiatlmt
      481 ddvfhdvayk akdrndllsg idefldqvtv lppgewdpsi rieppksvps qekrkapkfp
      541 ngstptgegl keeghhagpe lqrtgrlfgg lildikrkap fflsdfkdal slqclasilf
      601 lycacmspvi tfggllgeat qgrisaiesl fgasltgiay slfagqplti lgstgpvlvf
      661 ekilfkfcrd yglsylslrt ciglwtaflc ivlvatdass lvcyitrfte eafaalicii
      721 fiyealeklv hlgevypfnm hndlnkltsy scvcsepekp nnetlrvwrt mnksgediaw
      781 nnltvsecle yhgvfrgsac ghhgpyipdv lfwsvilffa tfflssflkk fktkryfptk
      841 vrstisdfav fltivimvli dylvgvpspk lhvpekfept rkdrgwfidp lggnpwwtll
      901 iaalpallct ilifmdqqit aviinrkehk lkkgcgyhld llmvgimlgi csvmglpwfv
      961 aatvlsishv nslkvesecs apgeqpkflg ireqrvtglm ifvlmgmsvs mtsvlkfipm
     1021 pvlygvflym gvsslkgiqf fdriklfgmp akhqpdliyl ryvplwkvhi ftvvqltclv
     1081 llwvikasaa avvfpmmvla lvfirklmdl cftkkelswl ddlmpeskkk teddekikek
     1141 eeaermfsdh dsvhlaygea nlefpvkslk yspekpesvk ievekspvvr yvdaetsl
//
LOCUS       XP_041322076            1126 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322076
VERSION     XP_041322076.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466142.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1126
                     /product="sodium bicarbonate cotransporter 3 isoform X9"
                     /calculated_mol_wt=126543
     Region          116..1013
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1126
                     /gene="SLC4A7"
                     /coded_by="XM_041466142.1:170..3550"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 gkkhsdphll erngllaspq sapgnldtgk sgdvkgtgtg gsrenstvdf skvdmnfmrk
      301 ipsgaeasnv lvgevdfler piiafvrlsp avllsgltev pvptrflfll lgpagkapqy
      361 heigrsiatl mtddvfhdva ykakdrndll sgidefldqv tvlppgewdp sirieppksv
      421 psqekrkapk fpngstptge glkeeghhag pelqrtgrlf gglildikrk apfflsdfkd
      481 alslqclasi lflycacmsp vitfggllge atqgrisaie slfgasltgi ayslfagqpl
      541 tilgstgpvl vfekilfkfc rdyglsylsl rtciglwtaf lcivlvatda sslvcyitrf
      601 teeafaalic iifiyealek lvhlgevypf nmhndlnklt syscvcsepe kpnnetlrvw
      661 rtmnksgedi awnnltvsec leyhgvfrgs acghhgpyip dvlfwsvilf fatfflssfl
      721 kkfktkryfp tkvrstisdf avfltivimv lidylvgvps pklhvpekfe ptrkdrgwfi
      781 dplggnpwwt lliaalpall ctilifmdqq itaviinrke hklkkgcgyh ldllmvgiml
      841 gicsvmglpw fvaatvlsis hvnslkvese csapgeqpkf lgireqrvtg lmifvlmgms
      901 vsmtsvlkfi pmpvlygvfl ymgvsslkgi qffdriklfg mpakhqpdli ylryvplwkv
      961 hiftvvqltc lvllwvikas aaavvfpmmv lalvfirklm dlcftkkels wlddlmpesk
     1021 kkteddekik ekeeaermfs dhdsvhlayg eanlefpvks lkysidpsvv nisdemakta
     1081 qwkalamste nakvtranls pekpesvkie vekspvvryv daetsl
//
LOCUS       XP_041322078            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium bicarbonate cotransporter 3 isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322078
VERSION     XP_041322078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="sodium bicarbonate cotransporter 3 isoform X10"
                     /calculated_mol_wt=122670
     Region          116..1013
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1090
                     /gene="SLC4A7"
                     /coded_by="XM_041466144.1:170..3442"
                     /db_xref="GeneID:121352850"
ORIGIN      
        1 meeerageqm rpllttghde eavvdmgkis stintnfeke eleshravyi gvhvplgkpg
       61 rrrhrhrghr hhrrkreket dredgresps ydtpsqrvqf ilgtedddeh iphdlftemd
      121 elcfrdgeey ewretarwlk feedvedggd rwskpyvatl slhslfelrs cilngtvmld
      181 mrantldeia dmvldnmias gqldesiren vreallkrhh hqnekkfssr iplvrsfadi
      241 gkkhsdphll erngllaspq sapgnldtgk sgdvkgtgtg gsrenstvdf skvdmnfmrk
      301 ipsgaeasnv lvgevdfler piiafvrlsp avllsgltev pvptrflfll lgpagkapqy
      361 heigrsiatl mtddvfhdva ykakdrndll sgidefldqv tvlppgewdp sirieppksv
      421 psqekrkapk fpngstptge glkeeghhag pelqrtgrlf gglildikrk apfflsdfkd
      481 alslqclasi lflycacmsp vitfggllge atqgrisaie slfgasltgi ayslfagqpl
      541 tilgstgpvl vfekilfkfc rdyglsylsl rtciglwtaf lcivlvatda sslvcyitrf
      601 teeafaalic iifiyealek lvhlgevypf nmhndlnklt syscvcsepe kpnnetlrvw
      661 rtmnksgedi awnnltvsec leyhgvfrgs acghhgpyip dvlfwsvilf fatfflssfl
      721 kkfktkryfp tkvrstisdf avfltivimv lidylvgvps pklhvpekfe ptrkdrgwfi
      781 dplggnpwwt lliaalpall ctilifmdqq itaviinrke hklkkgcgyh ldllmvgiml
      841 gicsvmglpw fvaatvlsis hvnslkvese csapgeqpkf lgireqrvtg lmifvlmgms
      901 vsmtsvlkfi pmpvlygvfl ymgvsslkgi qffdriklfg mpakhqpdli ylryvplwkv
      961 hiftvvqltc lvllwvikas aaavvfpmmv lalvfirklm dlcftkkels wlddlmpesk
     1021 kkteddekik ekeeaermfs dhdsvhlayg eanlefpvks lkyspekpes vkievekspv
     1081 vryvdaetsl
//
LOCUS       XP_041322079             753 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase EZH2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322079
VERSION     XP_041322079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466145.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="histone-lysine N-methyltransferase EZH2 isoform
                     X1"
                     /calculated_mol_wt=86049
     Region          39..68
                     /region_name="EZH2_WD-Binding"
                     /note="WD repeat binding protein EZH2; pfam11616"
                     /db_xref="CDD:463308"
     Region          158..256
                     /region_name="PRC2_HTH_1"
                     /note="Polycomb repressive complex 2 tri-helical domain;
                     pfam18118"
                     /db_xref="CDD:436286"
     Region          566..597
                     /region_name="preSET_CXC"
                     /note="CXC domain; pfam18264"
                     /db_xref="CDD:408079"
     Region          616..735
                     /region_name="SET_EZH2"
                     /note="SET domain found in enhancer of zeste homolog 2
                     (EZH2) and similar proteins; cd19218"
                     /db_xref="CDD:380995"
     Site            order(620,622..625,627,631,634,636,686..687,690,710,726)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:380995"
     Site            order(628..631,648,655,658..659,662,666,669..675,692..696,
                     704,731,733..734)
                     /site_type="active"
                     /db_xref="CDD:380995"
     Site            order(630..631,664..665,668,670,672,685,692..696,733)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380995"
     Site            order(630..631,664..665,668,670,672,685,692..695)
                     /site_type="inhibition"
                     /note="inhibitor binding site [chemical binding]"
                     /db_xref="CDD:380995"
     Site            order(648,655,658..659,662,666,671,673..675,704,731,
                     733..735)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380995"
     CDS             1..753
                     /gene="EZH2"
                     /coded_by="XM_041466145.1:222..2483"
                     /db_xref="GeneID:121352851"
ORIGIN      
        1 mgqtgkksek gpicwrkrvk seymrlrqlk rfrradevks mfnsnrqkil erteilnqew
       61 kqrriqpvhi mtsvsslrgt recsvtsdid fpkqviplkt lnavasvpim yswsplqqnf
      121 mvedetvlhn ipymgdevld qdgtfieeli knydgkvhgd rgepkhsecg findeifvel
      181 vnalgqysdd eddddgddnp derddkqkdr egnrmeketh pprrfpsdki feaissmfpd
      241 kgtaeelkek ykelteqqlp galppectpn idgpnaksvq reqslhsfht lfcrrcfkyd
      301 cflhpfhatp ntykrkntet aldnkpcgph cyqhlegake faaaltaeri ktppkrpggr
      361 rrgrlpnnts rpstptinvl eskdtdsdre agaetggenn dkeeeekkde tsssseansr
      421 cqtpikmkpn ieppenvews gaeasmfrvl igtyydnfca iarligtktc rqvyefrvke
      481 ssiiapvpae dvdtpprkkk rkhrlwaahc rkiqlkkdgs snhvynyqpc dhprqpcdss
      541 cpcviaqnfc ekfcqcssec qnrfpgcrck aqcntkqcpc ylavrecdpd lcltcgaadh
      601 wdsknvsckn csiqrgskkh lllapsdvag wgifikdpvq knefiseycg eiisqdeadr
      661 rgkvydkymc sflfnlnndf vvdatrkgnk irfanhsvnp ncyakvmmvn gdhrigifak
      721 raiqtgeelf fdyrysqada lkyvgierem eip
//
LOCUS       XP_041322080             749 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase EZH2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322080
VERSION     XP_041322080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..749
                     /product="histone-lysine N-methyltransferase EZH2 isoform
                     X2"
                     /calculated_mol_wt=85591
     Region          39..68
                     /region_name="EZH2_WD-Binding"
                     /note="WD repeat binding protein EZH2; pfam11616"
                     /db_xref="CDD:463308"
     Region          158..252
                     /region_name="PRC2_HTH_1"
                     /note="Polycomb repressive complex 2 tri-helical domain;
                     pfam18118"
                     /db_xref="CDD:436286"
     Region          562..593
                     /region_name="preSET_CXC"
                     /note="CXC domain; pfam18264"
                     /db_xref="CDD:408079"
     Region          612..731
                     /region_name="SET_EZH2"
                     /note="SET domain found in enhancer of zeste homolog 2
                     (EZH2) and similar proteins; cd19218"
                     /db_xref="CDD:380995"
     Site            order(616,618..621,623,627,630,632,682..683,686,706,722)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:380995"
     Site            order(624..627,644,651,654..655,658,662,665..671,688..692,
                     700,727,729..730)
                     /site_type="active"
                     /db_xref="CDD:380995"
     Site            order(626..627,660..661,664,666,668,681,688..692,729)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380995"
     Site            order(626..627,660..661,664,666,668,681,688..691)
                     /site_type="inhibition"
                     /note="inhibitor binding site [chemical binding]"
                     /db_xref="CDD:380995"
     Site            order(644,651,654..655,658,662,667,669..671,700,727,
                     729..731)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380995"
     CDS             1..749
                     /gene="EZH2"
                     /coded_by="XM_041466146.1:222..2471"
                     /db_xref="GeneID:121352851"
ORIGIN      
        1 mgqtgkksek gpicwrkrvk seymrlrqlk rfrradevks mfnsnrqkil erteilnqew
       61 kqrriqpvhi mtsvsslrgt recsvtsdid fpkqviplkt lnavasvpim yswsplqqnf
      121 mvedetvlhn ipymgdevld qdgtfieeli knydgkvhgd rgepkhsecg findeifvel
      181 vnalgqysdd eddddgddnp derddkqkdr eekethpprr fpsdkifeai ssmfpdkgta
      241 eelkekykel teqqlpgalp pectpnidgp naksvqreqs lhsfhtlfcr rcfkydcflh
      301 pfhatpntyk rkntetaldn kpcgphcyqh legakefaaa ltaeriktpp krpggrrrgr
      361 lpnntsrpst ptinvleskd tdsdreagae tggenndkee eekkdetsss seansrcqtp
      421 ikmkpniepp envewsgaea smfrvligty ydnfcaiarl igtktcrqvy efrvkessii
      481 apvpaedvdt pprkkkrkhr lwaahcrkiq lkkdgssnhv ynyqpcdhpr qpcdsscpcv
      541 iaqnfcekfc qcssecqnrf pgcrckaqcn tkqcpcylav recdpdlclt cgaadhwdsk
      601 nvsckncsiq rgskkhllla psdvagwgif ikdpvqknef iseycgeiis qdeadrrgkv
      661 ydkymcsflf nlnndfvvda trkgnkirfa nhsvnpncya kvmmvngdhr igifakraiq
      721 tgeelffdyr ysqadalkyv gieremeip
//
LOCUS       XP_041322081             747 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase EZH2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322081
VERSION     XP_041322081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..747
                     /product="histone-lysine N-methyltransferase EZH2 isoform
                     X3"
                     /calculated_mol_wt=85414
     Region          39..68
                     /region_name="EZH2_WD-Binding"
                     /note="WD repeat binding protein EZH2; pfam11616"
                     /db_xref="CDD:463308"
     Region          158..250
                     /region_name="PRC2_HTH_1"
                     /note="Polycomb repressive complex 2 tri-helical domain;
                     pfam18118"
                     /db_xref="CDD:436286"
     Region          560..591
                     /region_name="preSET_CXC"
                     /note="CXC domain; pfam18264"
                     /db_xref="CDD:408079"
     Region          610..729
                     /region_name="SET_EZH2"
                     /note="SET domain found in enhancer of zeste homolog 2
                     (EZH2) and similar proteins; cd19218"
                     /db_xref="CDD:380995"
     Site            order(614,616..619,621,625,628,630,680..681,684,704,720)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:380995"
     Site            order(622..625,642,649,652..653,656,660,663..669,686..690,
                     698,725,727..728)
                     /site_type="active"
                     /db_xref="CDD:380995"
     Site            order(624..625,658..659,662,664,666,679,686..690,727)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380995"
     Site            order(624..625,658..659,662,664,666,679,686..689)
                     /site_type="inhibition"
                     /note="inhibitor binding site [chemical binding]"
                     /db_xref="CDD:380995"
     Site            order(642,649,652..653,656,660,665,667..669,698,725,
                     727..729)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380995"
     CDS             1..747
                     /gene="EZH2"
                     /coded_by="XM_041466147.1:222..2465"
                     /db_xref="GeneID:121352851"
ORIGIN      
        1 mgqtgkksek gpicwrkrvk seymrlrqlk rfrradevks mfnsnrqkil erteilnqew
       61 kqrriqpvhi mtsvsslrgt recsvtsdid fpkqviplkt lnavasvpim yswsplqqnf
      121 mvedetvlhn ipymgdevld qdgtfieeli knydgkvhgd recgfindei fvelvnalgq
      181 ysddeddddg ddnpderddk qkdregnrme kethpprrfp sdkifeaiss mfpdkgtaee
      241 lkekykelte qqlpgalppe ctpnidgpna ksvqreqslh sfhtlfcrrc fkydcflhpf
      301 hatpntykrk ntetaldnkp cgphcyqhle gakefaaalt aeriktppkr pggrrrgrlp
      361 nntsrpstpt invleskdtd sdreagaetg genndkeeee kkdetsssse ansrcqtpik
      421 mkpnieppen vewsgaeasm frvligtyyd nfcaiarlig tktcrqvyef rvkessiiap
      481 vpaedvdtpp rkkkrkhrlw aahcrkiqlk kdgssnhvyn yqpcdhprqp cdsscpcvia
      541 qnfcekfcqc ssecqnrfpg crckaqcntk qcpcylavre cdpdlcltcg aadhwdsknv
      601 sckncsiqrg skkhlllaps dvagwgifik dpvqknefis eycgeiisqd eadrrgkvyd
      661 kymcsflfnl nndfvvdatr kgnkirfanh svnpncyakv mmvngdhrig ifakraiqtg
      721 eelffdyrys qadalkyvgi eremeip
//
LOCUS       XP_041322082             738 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase EZH2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322082
VERSION     XP_041322082.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466148.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..738
                     /product="histone-lysine N-methyltransferase EZH2 isoform
                     X4"
                     /calculated_mol_wt=84428
     Region          39..68
                     /region_name="EZH2_WD-Binding"
                     /note="WD repeat binding protein EZH2; pfam11616"
                     /db_xref="CDD:463308"
     Region          149..241
                     /region_name="PRC2_HTH_1"
                     /note="Polycomb repressive complex 2 tri-helical domain;
                     pfam18118"
                     /db_xref="CDD:436286"
     Region          551..582
                     /region_name="preSET_CXC"
                     /note="CXC domain; pfam18264"
                     /db_xref="CDD:408079"
     Region          601..720
                     /region_name="SET_EZH2"
                     /note="SET domain found in enhancer of zeste homolog 2
                     (EZH2) and similar proteins; cd19218"
                     /db_xref="CDD:380995"
     Site            order(605,607..610,612,616,619,621,671..672,675,695,711)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:380995"
     Site            order(613..616,633,640,643..644,647,651,654..660,677..681,
                     689,716,718..719)
                     /site_type="active"
                     /db_xref="CDD:380995"
     Site            order(615..616,649..650,653,655,657,670,677..681,718)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380995"
     Site            order(615..616,649..650,653,655,657,670,677..680)
                     /site_type="inhibition"
                     /note="inhibitor binding site [chemical binding]"
                     /db_xref="CDD:380995"
     Site            order(633,640,643..644,647,651,656,658..660,689,716,
                     718..720)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380995"
     CDS             1..738
                     /gene="EZH2"
                     /coded_by="XM_041466148.1:222..2438"
                     /db_xref="GeneID:121352851"
ORIGIN      
        1 mgqtgkksek gpicwrkrvk seymrlrqlk rfrradevks mfnsnrqkil erteilnqew
       61 kqrriqpvhi mtscsvtsdi dfpkqviplk tlnavasvpi myswsplqqn fmvedetvlh
      121 nipymgdevl dqdgtfieel iknydgkvhg drecgfinde ifvelvnalg qysddedddd
      181 gddnpderdd kqkdregnrm ekethpprrf psdkifeais smfpdkgtae elkekykelt
      241 eqqlpgalpp ectpnidgpn aksvqreqsl hsfhtlfcrr cfkydcflhp fhatpntykr
      301 kntetaldnk pcgphcyqhl egakefaaal taeriktppk rpggrrrgrl pnntsrpstp
      361 tinvleskdt dsdreagaet ggenndkeee ekkdetssss eansrcqtpi kmkpnieppe
      421 nvewsgaeas mfrvligtyy dnfcaiarli gtktcrqvye frvkessiia pvpaedvdtp
      481 prkkkrkhrl waahcrkiql kkdgssnhvy nyqpcdhprq pcdsscpcvi aqnfcekfcq
      541 cssecqnrfp gcrckaqcnt kqcpcylavr ecdpdlcltc gaadhwdskn vsckncsiqr
      601 gskkhlllap sdvagwgifi kdpvqknefi seycgeiisq deadrrgkvy dkymcsflfn
      661 lnndfvvdat rkgnkirfan hsvnpncyak vmmvngdhri gifakraiqt geelffdyry
      721 sqadalkyvg ieremeip
//
LOCUS       XP_041322083             776 aa            linear   VRT 06-MAY-2021
DEFINITION  cullin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322083
VERSION     XP_041322083.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466149.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="cullin-1"
                     /calculated_mol_wt=89561
     Region          21..660
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     Region          706..768
                     /region_name="Cullin_Nedd8"
                     /note="Cullin protein neddylation domain; pfam10557"
                     /db_xref="CDD:463146"
     CDS             1..776
                     /gene="CUL1"
                     /coded_by="XM_041466149.1:268..2598"
                     /db_xref="GeneID:121352852"
ORIGIN      
        1 mssnrsqnph glkqigldqi wddlragiqq vytrqsmaks rymelythvy nyctsvhqsn
       61 qargagvpps kskkgqtpgg aqfvglelyk rlkeflknyl tnllkdgedl mdesvlkfyt
      121 qqwedyrfss kvlngicayl nrhwvrrecd egrkgiyeiy slalvtwrdc lfrplnkqvt
      181 navlklieke rngetintrl isgvvqsyve lglneddafa kgptltvyke sfesqfladt
      241 erfytreste flqqnpvtey mkkaearlle eqrrvqvylh estqdelark ceqvliekhl
      301 eifhtefqnl ldadknedlg rmynlvsriq dglgelkkll ethihnqgla aiekcgeaal
      361 ndpkmyvqtv ldvhkkynal vmsafnndag fvaaldkacg rfinnnavtk maqssskspe
      421 llarycdsll kkssknpeea eledtlnqvm vvfkyiedkd vfqkfyakml akrlvhqnsa
      481 sddaeasmis klkqacgfey tsklqrmfqd igvskdlneq fkkhltnsep ldldfsiqvl
      541 ssgswpfqqs ctfalpsele rsyqrftafy asrhsgrklt wlyqlskgel vtncfknryt
      601 lqastfqmai llqynteday tvqqltdstq ikmdilaqvl qillkskllv ledenanvde
      661 velkpdtlik lylgyknkkl rvninvpmkt eqkqeqetth knieedrkll iqaaivrimk
      721 mrkvlkhqql lgevltqlss rfkprvpvik kcidilieke ylervdgekd tysyla
//
LOCUS       XP_041322084             865 aa            linear   VRT 06-MAY-2021
DEFINITION  rap guanine nucleotide exchange factor 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322084
VERSION     XP_041322084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466150.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..865
                     /product="rap guanine nucleotide exchange factor 5"
                     /calculated_mol_wt=98832
     Region          89..195
                     /region_name="DEP"
                     /note="DEP domain, named after Dishevelled, Egl-10, and
                     Pleckstrin, where this domain was first discovered. The
                     function of this domain is still not clear, but it is
                     believed to be important for the membrane association of
                     the signaling proteins in which it is...; cl02442"
                     /db_xref="CDD:470580"
     Region          352..484
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Site            order(371,426,429..430,433,436..437,472..473,476,483)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          625..864
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(658..660,670..671,673..675,677..678,681..682,685,
                     718,721..722,724..726,728..731,733..734,754,757,762..764,
                     767,780..782,785..787,789..791,793..796,810,814,852,
                     855..856)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..865
                     /gene="RAPGEF5"
                     /coded_by="XM_041466150.1:1152..3749"
                     /db_xref="GeneID:121352853"
ORIGIN      
        1 mavgsvkmps pcegaelars wspgggaqep pppvqlrqkl relpallrsg ltlrrksaaa
       61 agrtlsrris npyletpsnk iygessscag ralrniftlq asdlikdrvy ltgicrrscv
      121 gselvdwlle qcpfvkcrst avgvwqllld mgiilsvdrq lyfqdshafy qfsadectyl
      181 fcefekeeaw kngvklllql lplsppridm cnlpdqkied taetnaeila rltsavqrel
      241 aavialkark sainqneesn sqevrgvedl kdtsdaqagv lcklqgrddi grielvqkla
      301 rencqflqad rkalekaeqa ddaggerarg aagaalvlrk vwsrspaper rgryvvvsgt
      361 pekilehlls dlhleaaqdk etetllddfl ltytvfmttd dlcqallrhy caknhqgked
      421 dsdvscrkrk vlhlvsqwts lykdwlhede hlkqflktiy rnvlddvyey pvlekdlkef
      481 qkilgmhrrh tvdeysphrk nktffhqfsv kenwlqhrgt vneteeifcr vyitehsyvs
      541 vkaqvstsaq eilkivaeki qypeeelalv tvsfsgekhe lqpndlaisk slesssrmfv
      601 yrkdltdsls pfseneelqq rsvrilgint wdlaleltnf dwslfnaihe qeliyftfsr
      661 qgsaentenl slllqrcnev qlwvateill csqlckrvql vkkfikiaah ckaqrnlnsf
      721 faivmglnta svsrlsqtwe kipgkfkklf telesltdps lnhkayrdaf kkmkspkipf
      781 mplllkdvtf ihegnktfld nlvnfeklhm iadtvrslrh crnnqfgnev pskehhelkp
      841 yihhlhvidn qqalfelshr iepra
//
LOCUS       XP_041322085            1522 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322085
VERSION     XP_041322085.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466151.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1522
                     /product="CLIP-associating protein 2 isoform X1"
                     /calculated_mol_wt=166900
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          567..>787
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1522
                     /gene="CLASP2"
                     /coded_by="XM_041466151.1:10..4578"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgt asedgrirsk
      661 lstpsvgign sktdsrgrsr tkvvsqsqpg srsgspgrvl ttttlstmnt gvqrvlvnpa
      721 aaqkrskipr sqgcsreasp srlsvargsr iprpsvsqgc sreasressr dtspvrsfpp
      781 lgtgfgisqs srlsssvsam rvlntgsdve eavadalkkp vrrryesygm ysdddansda
      841 ssacsersys srngsiptym rqtedvaevl nrcastnwse rkegllglqn llknqrtlsr
      901 velkrlceif trmfadphsk rvfsmfletl vdfiqvhked lqdwlfvllt qllkkmgadl
      961 lgsvqakvqk aldvtresfp ndlqfsilmr ftvdqtqtps lktvkpalqd qlrsfwsskv
     1021 kvailkyiet laqqmdpgdf vnssetrlav sriitwttep kssdvrkaaq svlislfeln
     1081 tpeftmllga lpktfqdgat kllhnhlrnt gnsgqgsmgs pltrptprsp aswsspltsp
     1141 tntsqntlsp safdydtenm nsediysslr gvteaiqnfs frsqedmnep vkrdakkdds
     1201 dsicsasgiv dmragsgvsd tgrtaldnkt sllntmpphs sprsrdynpy nysdgisafn
     1261 ksalkeamfd ddaeqfpdep pmdhsdlvae llkelsnhne rveerkaaly elmkltqees
     1321 fgvwdehfkt illllletlg dkehairala lkvlreilrn qparfknyae ltimktleah
     1381 kdphkevvrs aeeaasmlat sispdqcikv lcpiiqtady pinlaaikmq tkviervske
     1441 tltqllpeiv pgliqgydns essvrkacvf clvaihavig delkphlsql tgskmkllnl
     1501 yikraqtgsg agdtaadmsg qs
//
LOCUS       XP_041322087            1521 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322087
VERSION     XP_041322087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1521
                     /product="CLIP-associating protein 2 isoform X2"
                     /calculated_mol_wt=166772
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          567..>787
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1521
                     /gene="CLASP2"
                     /coded_by="XM_041466153.1:10..4575"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgt asedgrirsk
      661 lstpsvgign sktdsrgrsr tkvvsqsqpg srsgspgrvl ttttlstmnt gvqrvlvnpa
      721 aaqkrskipr sqgcsreasp srlsvargsr iprpsvsqgc sreasressr dtspvrsfpp
      781 lgtgfgisqs srlsssvsam rvlntgsdve eavadalkpv rrryesygmy sdddansdas
      841 sacsersyss rngsiptymr qtedvaevln rcastnwser kegllglqnl lknqrtlsrv
      901 elkrlceift rmfadphskr vfsmfletlv dfiqvhkedl qdwlfvlltq llkkmgadll
      961 gsvqakvqka ldvtresfpn dlqfsilmrf tvdqtqtpsl ktvkpalqdq lrsfwsskvk
     1021 vailkyietl aqqmdpgdfv nssetrlavs riitwttepk ssdvrkaaqs vlislfelnt
     1081 peftmllgal pktfqdgatk llhnhlrntg nsgqgsmgsp ltrptprspa swsspltspt
     1141 ntsqntlsps afdydtenmn sediysslrg vteaiqnfsf rsqedmnepv krdakkddsd
     1201 sicsasgivd mragsgvsdt grtaldnkts llntmpphss prsrdynpyn ysdgisafnk
     1261 salkeamfdd daeqfpdepp mdhsdlvael lkelsnhner veerkaalye lmkltqeesf
     1321 gvwdehfkti llllletlgd kehairalal kvlreilrnq parfknyael timktleahk
     1381 dphkevvrsa eeaasmlats ispdqcikvl cpiiqtadyp inlaaikmqt kviervsket
     1441 ltqllpeivp gliqgydnse ssvrkacvfc lvaihavigd elkphlsqlt gskmkllnly
     1501 ikraqtgsga gdtaadmsgq s
//
LOCUS       XP_041322088            1516 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322088
VERSION     XP_041322088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1516
                     /product="CLIP-associating protein 2 isoform X3"
                     /calculated_mol_wt=166339
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          567..>781
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1516
                     /gene="CLASP2"
                     /coded_by="XM_041466154.1:10..4560"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgr irsklstpsv
      661 gignsktdsr grsrtkvvsq sqpgsrsgsp grvlttttls tmntgvqrvl vnpaaaqkrs
      721 kiprsqgcsr easpsrlsva rgsriprpsv sqgcsreasr essrdtspvr sfpplgtgfg
      781 isqssrlsss vsamrvlntg sdveeavada lkkpvrrrye sygmysddda nsdassacse
      841 rsyssrngsi ptymrqtedv aevlnrcast nwserkegll glqnllknqr tlsrvelkrl
      901 ceiftrmfad phskrvfsmf letlvdfiqv hkedlqdwlf vlltqllkkm gadllgsvqa
      961 kvqkaldvtr esfpndlqfs ilmrftvdqt qtpslktvkp alqdqlrsfw sskvkvailk
     1021 yietlaqqmd pgdfvnsset rlavsriitw ttepkssdvr kaaqsvlisl felntpeftm
     1081 llgalpktfq dgatkllhnh lrntgnsgqg smgspltrpt prspaswssp ltsptntsqn
     1141 tlspsafdyd tenmnsediy sslrgvteai qnfsfrsqed mnepvkrdak kddsdsicsa
     1201 sgivdmrags gvsdtgrtal dnktsllntm pphssprsrd ynpynysdgi safnksalke
     1261 amfdddaeqf pdeppmdhsd lvaellkels nhnerveerk aalyelmklt qeesfgvwde
     1321 hfktilllll etlgdkehai ralalkvlre ilrnqparfk nyaeltimkt leahkdphke
     1381 vvrsaeeaas mlatsispdq cikvlcpiiq tadypinlaa ikmqtkvier vsketltqll
     1441 peivpgliqg ydnsessvrk acvfclvaih avigdelkph lsqltgskmk llnlyikraq
     1501 tgsgagdtaa dmsgqs
//
LOCUS       XP_041322089            1514 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322089
VERSION     XP_041322089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1514
                     /product="CLIP-associating protein 2 isoform X4"
                     /calculated_mol_wt=165978
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..1514
                     /gene="CLASP2"
                     /coded_by="XM_041466155.1:10..4554"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl gtasedgrir sklstpsvgi
      661 gnsktdsrgr srtkvvsqsq pgsrsgspgr vlttttlstm ntgvqrvlvn paaaqkrski
      721 prsqgcsrea spsrlsvarg sriprpsvsq gcsreasres srdtspvrsf pplgtgfgis
      781 qssrlsssvs amrvlntgsd veeavadalk kpvrrryesy gmysdddans dassacsers
      841 yssrngsipt ymrqtedvae vlnrcastnw serkegllgl qnllknqrtl srvelkrlce
      901 iftrmfadph skrvfsmfle tlvdfiqvhk edlqdwlfvl ltqllkkmga dllgsvqakv
      961 qkaldvtres fpndlqfsil mrftvdqtqt pslktvkpal qdqlrsfwss kvkvailkyi
     1021 etlaqqmdpg dfvnssetrl avsriitwtt epkssdvrka aqsvlislfe lntpeftmll
     1081 galpktfqdg atkllhnhlr ntgnsgqgsm gspltrptpr spaswssplt sptntsqntl
     1141 spsafdydte nmnsediyss lrgvteaiqn fsfrsqedmn epvkrdakkd dsdsicsasg
     1201 ivdmragsgv sdtgrtaldn ktsllntmpp hssprsrdyn pynysdgisa fnksalkeam
     1261 fdddaeqfpd eppmdhsdlv aellkelsnh nerveerkaa lyelmkltqe esfgvwdehf
     1321 ktilllllet lgdkehaira lalkvlreil rnqparfkny aeltimktle ahkdphkevv
     1381 rsaeeaasml atsispdqci kvlcpiiqta dypinlaaik mqtkviervs ketltqllpe
     1441 ivpgliqgyd nsessvrkac vfclvaihav igdelkphls qltgskmkll nlyikraqtg
     1501 sgagdtaadm sgqs
//
LOCUS       XP_041322090            1508 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322090
VERSION     XP_041322090.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466156.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1508
                     /product="CLIP-associating protein 2 isoform X5"
                     /calculated_mol_wt=165417
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          574..>773
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1508
                     /gene="CLASP2"
                     /coded_by="XM_041466156.1:10..4536"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl grirsklstp svgignsktd
      661 srgrsrtkvv sqsqpgsrsg spgrvltttt lstmntgvqr vlvnpaaaqk rskiprsqgc
      721 sreaspsrls vargsriprp svsqgcsrea sressrdtsp vrsfpplgtg fgisqssrls
      781 ssvsamrvln tgsdveeava dalkkpvrrr yesygmysdd dansdassac sersyssrng
      841 siptymrqte dvaevlnrca stnwserkeg llglqnllkn qrtlsrvelk rlceiftrmf
      901 adphskrvfs mfletlvdfi qvhkedlqdw lfvlltqllk kmgadllgsv qakvqkaldv
      961 tresfpndlq fsilmrftvd qtqtpslktv kpalqdqlrs fwsskvkvai lkyietlaqq
     1021 mdpgdfvnss etrlavsrii twttepkssd vrkaaqsvli slfelntpef tmllgalpkt
     1081 fqdgatkllh nhlrntgnsg qgsmgspltr ptprspasws spltsptnts qntlspsafd
     1141 ydtenmnsed iysslrgvte aiqnfsfrsq edmnepvkrd akkddsdsic sasgivdmra
     1201 gsgvsdtgrt aldnktslln tmpphssprs rdynpynysd gisafnksal keamfdddae
     1261 qfpdeppmdh sdlvaellke lsnhnervee rkaalyelmk ltqeesfgvw dehfktilll
     1321 lletlgdkeh airalalkvl reilrnqpar fknyaeltim ktleahkdph kevvrsaeea
     1381 asmlatsisp dqcikvlcpi iqtadypinl aaikmqtkvi ervsketltq llpeivpgli
     1441 qgydnsessv rkacvfclva ihavigdelk phlsqltgsk mkllnlyikr aqtgsgagdt
     1501 aadmsgqs
//
LOCUS       XP_041322091            1505 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322091
VERSION     XP_041322091.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466157.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1505
                     /product="CLIP-associating protein 2 isoform X6"
                     /calculated_mol_wt=164926
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          567..>787
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1505
                     /gene="CLASP2"
                     /coded_by="XM_041466157.1:10..4527"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgt asedgrirsk
      661 lstpsvgign sktdsrgrsr tkvvsqsqpg srsgspgrvl ttttlstmnt gvqrvlvnpa
      721 aaqkrskipr sqgcsreasp srlsvargsr iprpsvsqgc sreasressr dtspvrsfpp
      781 lgtgfgisqs srlsssvsam rvlntgsdve eavadalkkp vrrryesygm ysdddansda
      841 ssacsersys srngsiptym rqtedvaevl nrcastnwse rkegllglqn llknqrtlsr
      901 velkrlceif trmfadphsk rvfsmfletl vdfiqvhked lqdwlfvllt qllkkmgadl
      961 lgsvqakvqk aldvtresfp ndlqfsilmr ftvdqtqtps lkvkvailky ietlaqqmdp
     1021 gdfvnssetr lavsriitwt tepkssdvrk aaqsvlislf elntpeftml lgalpktfqd
     1081 gatkllhnhl rntgnsgqgs mgspltrptp rspaswsspl tsptntsqnt lspsafdydt
     1141 enmnsediys slrgvteaiq nfsfrsqedm nepvkrdakk ddsdsicsas givdmragsg
     1201 vsdtgrtald nktsllntmp phssprsrdy npynysdgis afnksalkea mfdddaeqfp
     1261 deppmdhsdl vaellkelsn hnerveerka alyelmkltq eesfgvwdeh fktillllle
     1321 tlgdkehair alalkvlrei lrnqparfkn yaeltimktl eahkdphkev vrsaeeaasm
     1381 latsispdqc ikvlcpiiqt adypinlaai kmqtkvierv sketltqllp eivpgliqgy
     1441 dnsessvrka cvfclvaiha vigdelkphl sqltgskmkl lnlyikraqt gsgagdtaad
     1501 msgqs
//
LOCUS       XP_041322092            1491 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041322092
VERSION     XP_041322092.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466158.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1491
                     /product="CLIP-associating protein 2 isoform X7"
                     /calculated_mol_wt=163444
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          574..>773
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1491
                     /gene="CLASP2"
                     /coded_by="XM_041466158.1:10..4485"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl grirsklstp svgignsktd
      661 srgrsrtkvv sqsqpgsrsg spgrvltttt lstmntgvqr vlvnpaaaqk rskiprsqgc
      721 sreaspsrls vargsriprp svsqgcsrea sressrdtsp vrsfpplgtg fgisqssrls
      781 ssvsamrvln tgsdveeava dalkkpvrrr yesygmysdd dansdassac sersyssrng
      841 siptymrqte dvaevlnrca stnwserkeg llglqnllkn qrtlsrvelk rlceiftrmf
      901 adphskrvfs mfletlvdfi qvhkedlqdw lfvlltqllk kmgadllgsv qakvqkaldv
      961 tresfpndlq fsilmrftvd qtqtpslkvk vailkyietl aqqmdpgdfv nssetrlavs
     1021 riitwttepk ssdvrkaaqs vlislfelnt peftmllgal pktfqdgatk llhnhlrntg
     1081 nsgqgsmgsp ltrptprspa swsspltspt ntsqntlsps afdydtenmn sediysslrg
     1141 vteaiqnfsf rsqedmnepv krdakkddsd sicsasgivd mragsgvsdt grtaldnkts
     1201 llntmpphss prsrdynpyn ysdgisafnk salkeamfdd daeqfpdepp mdhsdlvael
     1261 lkelsnhner veerkaalye lmkltqeesf gvwdehfkti llllletlgd kehairalal
     1321 kvlreilrnq parfknyael timktleahk dphkevvrsa eeaasmlats ispdqcikvl
     1381 cpiiqtadyp inlaaikmqt kviervsket ltqllpeivp gliqgydnse ssvrkacvfc
     1441 lvaihavigd elkphlsqlt gskmkllnly ikraqtgsga gdtaadmsgq s
//
LOCUS       XP_041322093            1486 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041322093
VERSION     XP_041322093.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466159.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1486
                     /product="CLIP-associating protein 2 isoform X8"
                     /calculated_mol_wt=163003
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..1486
                     /gene="CLASP2"
                     /coded_by="XM_041466159.1:10..4470"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgt asedgrirsk
      661 lstpsvgign sktdsrgrsr tkvvsqsqpg srsgspgrvl ttttlstmnt gvqrvlvnpa
      721 aaqkrskipr sqgcsreasp srlsvgtgfg isqssrlsss vsamrvlntg sdveeavada
      781 lkkpvrrrye sygmysddda nsdassacse rsyssrngsi ptymrqtedv aevlnrcast
      841 nwserkegll glqnllknqr tlsrvelkrl ceiftrmfad phskrvfsmf letlvdfiqv
      901 hkedlqdwlf vlltqllkkm gadllgsvqa kvqkaldvtr esfpndlqfs ilmrftvdqt
      961 qtpslktvkp alqdqlrsfw sskvkvailk yietlaqqmd pgdfvnsset rlavsriitw
     1021 ttepkssdvr kaaqsvlisl felntpeftm llgalpktfq dgatkllhnh lrntgnsgqg
     1081 smgspltrpt prspaswssp ltsptntsqn tlspsafdyd tenmnsediy sslrgvteai
     1141 qnfsfrsqed mnepvkrdak kddsdsicsa sgivdmrags gvsdtgrtal dnktsllntm
     1201 pphssprsrd ynpynysdgi safnksalke amfdddaeqf pdeppmdhsd lvaellkels
     1261 nhnerveerk aalyelmklt qeesfgvwde hfktilllll etlgdkehai ralalkvlre
     1321 ilrnqparfk nyaeltimkt leahkdphke vvrsaeeaas mlatsispdq cikvlcpiiq
     1381 tadypinlaa ikmqtkvier vsketltqll peivpgliqg ydnsessvrk acvfclvaih
     1441 avigdelkph lsqltgskmk llnlyikraq tgsgagdtaa dmsgqs
//
LOCUS       XP_041322094            1485 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041322094
VERSION     XP_041322094.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466160.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1485
                     /product="CLIP-associating protein 2 isoform X9"
                     /calculated_mol_wt=162875
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..1485
                     /gene="CLASP2"
                     /coded_by="XM_041466160.1:10..4467"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgt asedgrirsk
      661 lstpsvgign sktdsrgrsr tkvvsqsqpg srsgspgrvl ttttlstmnt gvqrvlvnpa
      721 aaqkrskipr sqgcsreasp srlsvgtgfg isqssrlsss vsamrvlntg sdveeavada
      781 lkpvrrryes ygmysdddan sdassacser syssrngsip tymrqtedva evlnrcastn
      841 wserkegllg lqnllknqrt lsrvelkrlc eiftrmfadp hskrvfsmfl etlvdfiqvh
      901 kedlqdwlfv lltqllkkmg adllgsvqak vqkaldvtre sfpndlqfsi lmrftvdqtq
      961 tpslktvkpa lqdqlrsfws skvkvailky ietlaqqmdp gdfvnssetr lavsriitwt
     1021 tepkssdvrk aaqsvlislf elntpeftml lgalpktfqd gatkllhnhl rntgnsgqgs
     1081 mgspltrptp rspaswsspl tsptntsqnt lspsafdydt enmnsediys slrgvteaiq
     1141 nfsfrsqedm nepvkrdakk ddsdsicsas givdmragsg vsdtgrtald nktsllntmp
     1201 phssprsrdy npynysdgis afnksalkea mfdddaeqfp deppmdhsdl vaellkelsn
     1261 hnerveerka alyelmkltq eesfgvwdeh fktillllle tlgdkehair alalkvlrei
     1321 lrnqparfkn yaeltimktl eahkdphkev vrsaeeaasm latsispdqc ikvlcpiiqt
     1381 adypinlaai kmqtkvierv sketltqllp eivpgliqgy dnsessvrka cvfclvaiha
     1441 vigdelkphl sqltgskmkl lnlyikraqt gsgagdtaad msgqs
//
LOCUS       XP_041322095            1472 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041322095
VERSION     XP_041322095.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466161.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1472
                     /product="CLIP-associating protein 2 isoform X10"
                     /calculated_mol_wt=161521
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..1472
                     /gene="CLASP2"
                     /coded_by="XM_041466161.1:10..4428"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl grirsklstp svgignsktd
      661 srgrsrtkvv sqsqpgsrsg spgrvltttt lstmntgvqr vlvnpaaaqk rskiprsqgc
      721 sreaspsrls vgtgfgisqs srlsssvsam rvlntgsdve eavadalkkp vrrryesygm
      781 ysdddansda ssacsersys srngsiptym rqtedvaevl nrcastnwse rkegllglqn
      841 llknqrtlsr velkrlceif trmfadphsk rvfsmfletl vdfiqvhked lqdwlfvllt
      901 qllkkmgadl lgsvqakvqk aldvtresfp ndlqfsilmr ftvdqtqtps lktvkpalqd
      961 qlrsfwsskv kvailkyiet laqqmdpgdf vnssetrlav sriitwttep kssdvrkaaq
     1021 svlislfeln tpeftmllga lpktfqdgat kllhnhlrnt gnsgqgsmgs pltrptprsp
     1081 aswsspltsp tntsqntlsp safdydtenm nsediysslr gvteaiqnfs frsqedmnep
     1141 vkrdakkdds dsicsasgiv dmragsgvsd tgrtaldnkt sllntmpphs sprsrdynpy
     1201 nysdgisafn ksalkeamfd ddaeqfpdep pmdhsdlvae llkelsnhne rveerkaaly
     1261 elmkltqees fgvwdehfkt illllletlg dkehairala lkvlreilrn qparfknyae
     1321 ltimktleah kdphkevvrs aeeaasmlat sispdqcikv lcpiiqtady pinlaaikmq
     1381 tkviervske tltqllpeiv pgliqgydns essvrkacvf clvaihavig delkphlsql
     1441 tgskmkllnl yikraqtgsg agdtaadmsg qs
//
LOCUS       XP_041322096            1290 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041322096
VERSION     XP_041322096.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466162.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1290
                     /product="CLIP-associating protein 2 isoform X11"
                     /calculated_mol_wt=140711
     Region          94..306
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          335..>555
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1290
                     /gene="CLASP2"
                     /coded_by="XM_041466162.1:84..3956"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mmavgddksf ddeesvdgnr pssaasafkv papkkpgnps nsarkpgsag gpkvggsske
       61 ggagavdedd fikaftdvpt vqiyssrele etlnkireil sddkhdwdqr tnalkkvrsl
      121 lvagaaqydg ffqhlrlldg afklsakdlr sqvvreacit vahlstvlgn kfdhgaeaiv
      181 ptlfnlvpns akvmatsgca airfiirhth vprliplits nctsksvavr rrsfefldll
      241 lqewqthsle rhaavlveti kkgihdadae arvearkayl glrnhfpsea etlynslepp
      301 yqrslqtylk nsgsiaslpq sdrsssssqe slnrplsskw saaspaslag raagsskgvp
      361 spgtlqrsrs didvnaatga karhaagqta gagrlsaagl ppgsyasled tsdkmdgtas
      421 edgrirskls tpsvgignsk tdsrgrsrtk vvsqsqpgsr sgspgrvltt ttlstmntgv
      481 qrvlvnpaaa qkrskiprsq gcsreaspsr lsvargsrip rpsvsqgcsr easressrdt
      541 spvrsfpplg tgfgisqssr lsssvsamrv lntgsdveea vadalkkpvr rryesygmys
      601 dddansdass acsersyssr ngsiptymrq tedvaevlnr castnwserk egllglqnll
      661 knqrtlsrve lkrlceiftr mfadphskrv fsmfletlvd fiqvhkedlq dwlfvlltql
      721 lkkmgadllg svqakvqkal dvtresfpnd lqfsilmrft vdqtqtpslk tvkpalqdql
      781 rsfwsskvkv ailkyietla qqmdpgdfvn ssetrlavsr iitwttepks sdvrkaaqsv
      841 lislfelntp eftmllgalp ktfqdgatkl lhnhlrntgn sgqgsmgspl trptprspas
      901 wsspltsptn tsqntlspsa fdydtenmns ediysslrgv teaiqnfsfr sqedmnepvk
      961 rdakkddsds icsasgivdm ragsgvsdtg rtaldnktsl lntmpphssp rsrdynpyny
     1021 sdgisafnks alkeamfddd aeqfpdeppm dhsdlvaell kelsnhnerv eerkaalyel
     1081 mkltqeesfg vwdehfktil lllletlgdk ehairalalk vlreilrnqp arfknyaelt
     1141 imktleahkd phkevvrsae eaasmlatsi spdqcikvlc piiqtadypi nlaaikmqtk
     1201 viervsketl tqllpeivpg liqgydnses svrkacvfcl vaihavigde lkphlsqltg
     1261 skmkllnlyi kraqtgsgag dtaadmsgqs
//
LOCUS       XP_041322098            1526 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X12 [Pyrgilauda ruficollis].
ACCESSION   XP_041322098
VERSION     XP_041322098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1526
                     /product="CLIP-associating protein 2 isoform X12"
                     /calculated_mol_wt=167098
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          567..>805
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1526
                     /gene="CLASP2"
                     /coded_by="XM_041466164.1:10..4590"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgt asedgrirsk
      661 lstpsvgign sktdsrgrsr tkvvsqsqpg srsgspgrvl ttttlstmnt gvqrvlvnpa
      721 aaqkrskipr sqgcsreasp srlsvargsr iprpsvsqgc sreasressr dtspvrsfpp
      781 lasrhhsrst galyapdayg atgtgfgisq ssrlsssvsa mrvlntgsdv eeavadalkk
      841 pvrrryesyg mysdddansd assacsersy ssrngsipty mrqtedvaev lnrcastnws
      901 erkegllglq nllknqrtls rvelkrlcei ftrmfadphs krvfsmflet lvdfiqvhke
      961 dlqdwlfvll tqllkkmgad llgsvqakvq kaldvtresf pndlqfsilm rftvdqtqtp
     1021 slkvkvailk yietlaqqmd pgdfvnsset rlavsriitw ttepkssdvr kaaqsvlisl
     1081 felntpeftm llgalpktfq dgatkllhnh lrntgnsgqg smgspltrpt prspaswssp
     1141 ltsptntsqn tlspsafdyd tenmnsediy sslrgvteai qnfsfrsqed mnepvkrdak
     1201 kddsdsicsa sgivdmrags gvsdtgrtal dnktsllntm pphssprsrd ynpynysdgi
     1261 safnksalke amfdddaeqf pdeppmdhsd lvaellkels nhnerveerk aalyelmklt
     1321 qeesfgvwde hfktilllll etlgdkehai ralalkvlre ilrnqparfk nyaeltimkt
     1381 leahkdphke vvrsaeeaas mlatsispdq cikvlcpiiq tadypinlaa ikmqtkvier
     1441 vsketltqll peivpgliqg ydnsessvrk acvfclvaih avigdelkph lsqltgskmk
     1501 llnlyikraq tgsgagdtaa dmsgqs
//
LOCUS       XP_041322099            1499 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X13 [Pyrgilauda ruficollis].
ACCESSION   XP_041322099
VERSION     XP_041322099.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466165.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1499
                     /product="CLIP-associating protein 2 isoform X13"
                     /calculated_mol_wt=164366
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          567..>781
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..1499
                     /gene="CLASP2"
                     /coded_by="XM_041466165.1:10..4509"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl edtsdkmdgr irsklstpsv
      661 gignsktdsr grsrtkvvsq sqpgsrsgsp grvlttttls tmntgvqrvl vnpaaaqkrs
      721 kiprsqgcsr easpsrlsva rgsriprpsv sqgcsreasr essrdtspvr sfpplgtgfg
      781 isqssrlsss vsamrvlntg sdveeavada lkkpvrrrye sygmysddda nsdassacse
      841 rsyssrngsi ptymrqtedv aevlnrcast nwserkegll glqnllknqr tlsrvelkrl
      901 ceiftrmfad phskrvfsmf letlvdfiqv hkedlqdwlf vlltqllkkm gadllgsvqa
      961 kvqkaldvtr esfpndlqfs ilmrftvdqt qtpslkvkva ilkyietlaq qmdpgdfvns
     1021 setrlavsri itwttepkss dvrkaaqsvl islfelntpe ftmllgalpk tfqdgatkll
     1081 hnhlrntgns gqgsmgsplt rptprspasw sspltsptnt sqntlspsaf dydtenmnse
     1141 diysslrgvt eaiqnfsfrs qedmnepvkr dakkddsdsi csasgivdmr agsgvsdtgr
     1201 taldnktsll ntmpphsspr srdynpynys dgisafnksa lkeamfddda eqfpdeppmd
     1261 hsdlvaellk elsnhnerve erkaalyelm kltqeesfgv wdehfktill llletlgdke
     1321 hairalalkv lreilrnqpa rfknyaelti mktleahkdp hkevvrsaee aasmlatsis
     1381 pdqcikvlcp iiqtadypin laaikmqtkv iervsketlt qllpeivpgl iqgydnsess
     1441 vrkacvfclv aihavigdel kphlsqltgs kmkllnlyik raqtgsgagd taadmsgqs
//
LOCUS       XP_041322100            1455 aa            linear   VRT 06-MAY-2021
DEFINITION  CLIP-associating protein 2 isoform X14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322100
VERSION     XP_041322100.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466166.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1455
                     /product="CLIP-associating protein 2 isoform X14"
                     /calculated_mol_wt=159548
     Region          <81..196
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     Region          326..538
                     /region_name="CLASP_N"
                     /note="CLASP N terminal; pfam12348"
                     /db_xref="CDD:432496"
     CDS             1..1455
                     /gene="CLASP2"
                     /coded_by="XM_041466166.1:10..4377"
                     /db_xref="GeneID:121352854"
ORIGIN      
        1 mepagmdyfc eqvqqkdvgr rmqvgqelle ylgdparspd leqdqqrldk videltawvn
       61 ssnfkvallg ldvlgafvdr lsgrfkpyig tvlmalidrm gdakdqvreq aqnlilklmc
      121 eaappmyiwe rlavgfkhkn yrsregvclc lvatlniyga qplilsklvp hlciafgdsn
      181 sqvrdaaila ivevyrhvge kvridltkrg ippgrlqtif akfdeirnsd nmilsnvsdk
      241 sfddeesvdg nrpssaasaf kvpapkkpgn psnsarkpgs aggpkvggss keggagavde
      301 ddfikaftdv ptvqiyssre leetlnkire ilsddkhdwd qrtnalkkvr sllvagaaqy
      361 dgffqhlrll dgafklsakd lrsqvvreac itvahlstvl gnkfdhgaea ivptlfnlvp
      421 nsakvmatsg caairfiirh thvprlipli tsnctsksva vrrrsfefld lllqewqths
      481 lerhaavlve tikkgihdad aearvearka ylglrnhfps eaetlynsle ppyqrslqty
      541 lknsgsiasl pqsdrsssss qeslnrplss kwsaaspasl agraagsskg vpspgtlqrs
      601 rsdidvnaat gakarhaagq tagagrlsaa glppgsyasl grirsklstp svgignsktd
      661 srgrsrtkvv sqsqpgsrsg spgrvltttt lstmntgvqr vlvnpaaaqk rskiprsqgc
      721 sreaspsrls vgtgfgisqs srlsssvsam rvlntgsdve eavadalkkp vrrryesygm
      781 ysdddansda ssacsersys srngsiptym rqtedvaevl nrcastnwse rkegllglqn
      841 llknqrtlsr velkrlceif trmfadphsk rvfsmfletl vdfiqvhked lqdwlfvllt
      901 qllkkmgadl lgsvqakvqk aldvtresfp ndlqfsilmr ftvdqtqtps lkvkvailky
      961 ietlaqqmdp gdfvnssetr lavsriitwt tepkssdvrk aaqsvlislf elntpeftml
     1021 lgalpktfqd gatkllhnhl rntgnsgqgs mgspltrptp rspaswsspl tsptntsqnt
     1081 lspsafdydt enmnsediys slrgvteaiq nfsfrsqedm nepvkrdakk ddsdsicsas
     1141 givdmragsg vsdtgrtald nktsllntmp phssprsrdy npynysdgis afnksalkea
     1201 mfdddaeqfp deppmdhsdl vaellkelsn hnerveerka alyelmkltq eesfgvwdeh
     1261 fktillllle tlgdkehair alalkvlrei lrnqparfkn yaeltimktl eahkdphkev
     1321 vrsaeeaasm latsispdqc ikvlcpiiqt adypinlaai kmqtkvierv sketltqllp
     1381 eivpgliqgy dnsessvrka cvfclvaiha vigdelkphl sqltgskmkl lnlyikraqt
     1441 gsgagdtaad msgqs
//
LOCUS       XP_041322101            1624 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-beta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322101
VERSION     XP_041322101.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466167.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1624
                     /product="DNA topoisomerase 2-beta isoform X1"
                     /calculated_mol_wt=182886
     Region          47..1474
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          1521..1611
                     /region_name="DTHCT"
                     /note="DTHCT (NUC029) region; pfam08070"
                     /db_xref="CDD:462355"
     CDS             1..1624
                     /gene="TOP2B"
                     /coded_by="XM_041466167.1:733..5607"
                     /db_xref="GeneID:121352855"
ORIGIN      
        1 maksgggggg ggggggsggl twvtlfdnqm naskkedses inkndtskkm svervyqkkt
       61 qlehillrpd tyigsveplt qlmwvydedv gmncrevtfv pglykifdei lvnaadnkqr
      121 dknmtcikis idpesniisi wnngkgipvv ehkvekvyvp alifgqllts snydddekkv
      181 tggrngygak lcnifstkft vetackeykh sfkqtwmnnm mktsepkikh fegddytcit
      241 fqpdlskfkm ekldkdival mtrraydlag sckgvkvmln gkklpvngfr syvdlyvkdk
      301 ldetgvalkv ihevvnerwd vcltlsekgf qqisfvnsia ttkggrhvdy vvdqvvgkli
      361 evvkkknkag vsvkpfqvkn hiwvfvncli enpsfdsqtk enmtlqpksf gskcqlsekf
      421 fkaasncgii esilnwvkfk aqtqlnkkcs svkhskikgi pklddandag gkhsldctli
      481 ltegdsaksl avsglgvigr drygvfplrg kilnvreash kqimenaein niikivglqy
      541 kksyedpesl kslrygkimi mtdqdqdgsh ikgllinfih hnwpsllkhg fleefitpiv
      601 kasknkqels fysipefdew kkhmenhkaw kikyykglgt stakeakeyf admerhrilf
      661 ryagpeddaa itlafskkki ddrkewltnf medrrqrrlh glpeqflygt atkhltyndf
      721 inkelilfsn sdnersipsl vdglkpgqrk vlftcfkrnd krevkvaqla gsvaemsayh
      781 hgeqalmmti vnlaqnfvgs nnvnllqpig qfgtrlhggk daaspryift mlsplarllf
      841 psvddnllkf lyddnqrvep ewyipiipmv lvngaegigt gwacklpnyd treivnnvrr
      901 mldgldphpm lpnyknfkgt iqelgqnqyv vsgeifvvdr ntveitelpv rtwtqvykeq
      961 vlepmlngte ktpalisdyk eyhtdttvkf vvkmteekla qaeaaglhkv fklqtsltcn
     1021 smvlfdhmgc lkkyetvqdi lkeffdlrlh yyslrkewlv gmlgaestkl nnqarfilek
     1081 iqgkitienr skrdliqmlv qrgyesdpvk awkeaqekaa eeedsqnand dassasgpas
     1141 gpdfnyilnm slwsltkekv eelikqrdsk erelndlkrk spsdlwkedl aafveelekv
     1201 eaqeredvla gmvgkpikgk vgkpkmkklq leetmpspfg rrivpqitsa mkadasrkll
     1261 kkkkgetdsl aikmefdeef ggvpaegggd dslnasaaaa ktpkpkrekk epgarvrrtp
     1321 sstkssakkv kkrnpwsdde sksesdleen epviiprdsl lrraaaerpk ytfdfseeed
     1381 dadddddann nndldelkvk aspvtndred efvpsdslek deydfspaks kpspdrkisq
     1441 akkhqdfgni fsfpsysqkt dddttkldsd dedsapvfss sftpkqteki psktvaakka
     1501 kldappkpkr apkakkvetv nsdsdsefgi pkktaapkgk grgakkrkas gsenegdynp
     1561 gkktpkstps kkskkaafdq dsdveifqsg fasetapkpr tgrarkevky faesdedddf
     1621 dmfn
//
LOCUS       XP_041322102            1623 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-beta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322102
VERSION     XP_041322102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1623
                     /product="DNA topoisomerase 2-beta isoform X2"
                     /calculated_mol_wt=182744
     Region          47..1473
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          1520..1610
                     /region_name="DTHCT"
                     /note="DTHCT (NUC029) region; pfam08070"
                     /db_xref="CDD:462355"
     CDS             1..1623
                     /gene="TOP2B"
                     /coded_by="XM_041466168.1:733..5604"
                     /db_xref="GeneID:121352855"
ORIGIN      
        1 maksgggggg ggggggsggl twvtlfdnqm naskkedses inkndtskkm svervyqkkt
       61 qlehillrpd tyigsveplt qlmwvydedv gmncrevtfv pglykifdei lvnaadnkqr
      121 dknmtcikis idpesniisi wnngkgipvv ehkvekvyvp alifgqllts snydddekkv
      181 tggrngygak lcnifstkft vetackeykh sfkqtwmnnm mktsepkikh fegddytcit
      241 fqpdlskfkm ekldkdival mtrraydlag sckgvkvmln gkklpvngfr syvdlyvkdk
      301 ldetgvalkv ihevvnerwd vcltlsekgf qqisfvnsia ttkggrhvdy vvdqvvgkli
      361 evvkkknkag vsvkpfqvkn hiwvfvncli enpsfdsqtk enmtlqpksf gskcqlsekf
      421 fkaasncgii esilnwvkfk aqtqlnkkcs svkhskikgi pklddandag gkhsldctli
      481 ltegdsaksl avsglgvigr drygvfplrg kilnvreash kqimenaein niikivglqy
      541 kksyedpesl kslrygkimi mtdqdqdgsh ikgllinfih hnwpsllkhg fleefitpiv
      601 kasknkqels fysipefdew kkhmenhkaw kikyykglgt stakeakeyf admerhrilf
      661 ryagpeddaa itlafskkki ddrkewltnf medrrqrrlh glpeqflygt atkhltyndf
      721 inkelilfsn sdnersipsl vdglkpgqrk vlftcfkrnd krevkvaqla gsvaemsayh
      781 hgeqalmmti vnlaqnfvgs nnvnllqpig qfgtrlhggk daaspryift mlsplarllf
      841 psvddnllkf lyddnqrvep ewyipiipmv lvngaegigt gwacklpnyd treivnnvrr
      901 mldgldphpm lpnyknfkgt iqelgqnqyv vsgeifvvdr ntveitelpv rtwtqvykeq
      961 vlepmlngte ktpalisdyk eyhtdttvkf vvkmteekla qaeaaglhkv fklqtsltcn
     1021 smvlfdhmgc lkkyetvqdi lkeffdlrlh yyslrkewlv gmlgaestkl nnqarfilek
     1081 iqgkitienr skrdliqmlv qrgyesdpvk awkeaqekaa eeedsqnand dassasgpas
     1141 gpdfnyilnm slwsltkekv eelikqrdsk erelndlkrk spsdlwkedl aafveelekv
     1201 eaqeredvla gmvgkpikgk vgkpkmkklq leetmpspfg rrivpqitsa mkadasrkll
     1261 kkkkgetdsl aikmefdeef ggvpaegggd dslnasaaaa ktpkpkrekk epgarvrrtp
     1321 sstkssakkv kkrnpwsdde sksesdleen epviiprdsl lrraaaerpk ytfdfseeed
     1381 dadddddann nndldelkvk aspvtndred efvpsdslek deydfspaks kpspekisqa
     1441 kkhqdfgnif sfpsysqktd ddttkldsdd edsapvfsss ftpkqtekip sktvaakkak
     1501 ldappkpkra pkakkvetvn sdsdsefgip kktaapkgkg rgakkrkasg senegdynpg
     1561 kktpkstpsk kskkaafdqd sdveifqsgf asetapkprt grarkevkyf aesdedddfd
     1621 mfn
//
LOCUS       XP_041322103            1587 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-beta isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322103
VERSION     XP_041322103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1587
                     /product="DNA topoisomerase 2-beta isoform X3"
                     /calculated_mol_wt=178903
     Region          47..1424
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          1484..1574
                     /region_name="DTHCT"
                     /note="DTHCT (NUC029) region; pfam08070"
                     /db_xref="CDD:462355"
     CDS             1..1587
                     /gene="TOP2B"
                     /coded_by="XM_041466169.1:733..5496"
                     /db_xref="GeneID:121352855"
ORIGIN      
        1 maksgggggg ggggggsggl twvtlfdnqm naskkedses inkndtskkm svervyqkkt
       61 qlehillrpd tyigsveplt qlmwvydedv gmncrevtfv pglykifdei lvnaadnkqr
      121 dknmtcikis idpesniisi wnngkgipvv ehkvekvyvp alifgqllts snydddekkv
      181 tggrngygak lcnifstkft vetackeykh sfkqtwmnnm mktsepkikh fegddytcit
      241 fqpdlskfkm ekldkdival mtrraydlag sckgvkvmln gkklpvngfr syvdlyvkdk
      301 ldetgvalkv ihevvnerwd vcltlsekgf qqisfvnsia ttkggrhvdy vvdqvvgkli
      361 evvkkknkag vsvkpfqvkn hiwvfvncli enpsfdsqtk enmtlqpksf gskcqlsekf
      421 fkaasncgii esilnwvkfk aqtqlnkkcs svkhskikgi pklddandag gkhsldctli
      481 ltegdsaksl avsglgvigr drygvfplrg kilnvreash kqimenaein niikivglqy
      541 kksyedpesl kslrygkimi mtdqdqdgsh ikgllinfih hnwpsllkhg fleefitpiv
      601 kasknkqels fysipefdew kkhmenhkaw kikyykglgt stakeakeyf admerhrilf
      661 ryagpeddaa itlafskkki ddrkewltnf medrrqrrlh glpeqflygt atkhltyndf
      721 inkelilfsn sdnersipsl vdglkpgqrk vlftcfkrnd krevkvaqla gsvaemsayh
      781 hgeqalmmti vnlaqnfvgs nnvnllqpig qfgtrlhggk daaspryift mlsplarllf
      841 psvddnllkf lyddnqrvep ewyipiipmv lvngaegigt gwacklpnyd treivnnvrr
      901 mldgldphpm lpnyknfkgt iqelgqnqyv vsgeifvvdr ntveitelpv rtwtqvykeq
      961 vlepmlngte ktpalisdyk eyhtdttvkf vvkmteekla qaeaaglhkv fklqtsltcn
     1021 smvlfdhmgc lkkyetvqdi lkeffdlrlh yyslrkewlv gmlgaestkl nnqarfilek
     1081 iqgkitienr skrdliqmlv qrgyesdpvk awkeaqekaa eeedsqnand dassasgpas
     1141 gpdfnyilnm slwsltkekv eelikqrdsk erelndlkrk spsdlwkedl aafveelekv
     1201 eaqeredvla gmvgkpikgk vgkpkmkklq leetmpspfg rrivpqitsa mkadasrkll
     1261 kkkkgetdsl aikmefdeef ggvpaegggd dslnasaaaa ktpkpkrekk epgarvrrtp
     1321 sstkssakkv kkrnpwsdde sksesdleen epviiprdsl lrraaaerpk ytfdfseeed
     1381 dadddddann nndldelkvk aspvtndred efvpsdslek deydfspaks kpspdrkisq
     1441 akkhqdfgni fsfpsysqkt ddakldappk pkrapkakkv etvnsdsdse fgipkktaap
     1501 kgkgrgakkr kasgsenegd ynpgkktpks tpskkskkaa fdqdsdveif qsgfasetap
     1561 kprtgrarke vkyfaesded ddfdmfn
//
LOCUS       XP_041322104            1586 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-beta isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322104
VERSION     XP_041322104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1586
                     /product="DNA topoisomerase 2-beta isoform X4"
                     /calculated_mol_wt=178761
     Region          47..1465
                     /region_name="PTZ00108"
                     /note="DNA topoisomerase 2-like protein; Provisional"
                     /db_xref="CDD:240271"
     Region          1483..1573
                     /region_name="DTHCT"
                     /note="DTHCT (NUC029) region; pfam08070"
                     /db_xref="CDD:462355"
     CDS             1..1586
                     /gene="TOP2B"
                     /coded_by="XM_041466170.1:733..5493"
                     /db_xref="GeneID:121352855"
ORIGIN      
        1 maksgggggg ggggggsggl twvtlfdnqm naskkedses inkndtskkm svervyqkkt
       61 qlehillrpd tyigsveplt qlmwvydedv gmncrevtfv pglykifdei lvnaadnkqr
      121 dknmtcikis idpesniisi wnngkgipvv ehkvekvyvp alifgqllts snydddekkv
      181 tggrngygak lcnifstkft vetackeykh sfkqtwmnnm mktsepkikh fegddytcit
      241 fqpdlskfkm ekldkdival mtrraydlag sckgvkvmln gkklpvngfr syvdlyvkdk
      301 ldetgvalkv ihevvnerwd vcltlsekgf qqisfvnsia ttkggrhvdy vvdqvvgkli
      361 evvkkknkag vsvkpfqvkn hiwvfvncli enpsfdsqtk enmtlqpksf gskcqlsekf
      421 fkaasncgii esilnwvkfk aqtqlnkkcs svkhskikgi pklddandag gkhsldctli
      481 ltegdsaksl avsglgvigr drygvfplrg kilnvreash kqimenaein niikivglqy
      541 kksyedpesl kslrygkimi mtdqdqdgsh ikgllinfih hnwpsllkhg fleefitpiv
      601 kasknkqels fysipefdew kkhmenhkaw kikyykglgt stakeakeyf admerhrilf
      661 ryagpeddaa itlafskkki ddrkewltnf medrrqrrlh glpeqflygt atkhltyndf
      721 inkelilfsn sdnersipsl vdglkpgqrk vlftcfkrnd krevkvaqla gsvaemsayh
      781 hgeqalmmti vnlaqnfvgs nnvnllqpig qfgtrlhggk daaspryift mlsplarllf
      841 psvddnllkf lyddnqrvep ewyipiipmv lvngaegigt gwacklpnyd treivnnvrr
      901 mldgldphpm lpnyknfkgt iqelgqnqyv vsgeifvvdr ntveitelpv rtwtqvykeq
      961 vlepmlngte ktpalisdyk eyhtdttvkf vvkmteekla qaeaaglhkv fklqtsltcn
     1021 smvlfdhmgc lkkyetvqdi lkeffdlrlh yyslrkewlv gmlgaestkl nnqarfilek
     1081 iqgkitienr skrdliqmlv qrgyesdpvk awkeaqekaa eeedsqnand dassasgpas
     1141 gpdfnyilnm slwsltkekv eelikqrdsk erelndlkrk spsdlwkedl aafveelekv
     1201 eaqeredvla gmvgkpikgk vgkpkmkklq leetmpspfg rrivpqitsa mkadasrkll
     1261 kkkkgetdsl aikmefdeef ggvpaegggd dslnasaaaa ktpkpkrekk epgarvrrtp
     1321 sstkssakkv kkrnpwsdde sksesdleen epviiprdsl lrraaaerpk ytfdfseeed
     1381 dadddddann nndldelkvk aspvtndred efvpsdslek deydfspaks kpspekisqa
     1441 kkhqdfgnif sfpsysqktd dakldappkp krapkakkve tvnsdsdsef gipkktaapk
     1501 gkgrgakkrk asgsenegdy npgkktpkst pskkskkaaf dqdsdveifq sgfasetapk
     1561 prtgrarkev kyfaesdedd dfdmfn
//
LOCUS       XP_041322105             448 aa            linear   VRT 06-MAY-2021
DEFINITION  retinoic acid receptor beta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322105
VERSION     XP_041322105.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466171.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="retinoic acid receptor beta isoform X1"
                     /calculated_mol_wt=50326
     Region          75..159
                     /region_name="NR_DBD_RAR"
                     /note="DNA-binding domain of retinoic acid receptor (RAR)
                     is composed of two C4-type zinc fingers; cd06964"
                     /db_xref="CDD:143522"
     Site            order(81,84,98,101,117,123,133,136)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143522"
     Site            order(91..93,99..100,102,104,106..107,110,130..131,134,
                     137,150..152)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143522"
     Site            order(128,131..134)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:143522"
     Region          179..409
                     /region_name="NR_LBD_RAR"
                     /note="The ligand binding domain (LBD) of retinoic acid
                     receptor (RAR), a members of the nuclear receptor
                     superfamily; cd06937"
                     /db_xref="CDD:132735"
     Site            order(221,224..225,228,259,262..263,266,269,279..280,295,
                     387..388,391,407)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132735"
     Site            order(233,237,247,250..251,254..255,401..402,405..406)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132735"
     Site            order(308,330..331,342,345..346,349..350,353,357,368..369,
                     371..372,375,378..379)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132735"
     CDS             1..448
                     /gene="RARB"
                     /coded_by="XM_041466171.1:543..1889"
                     /db_xref="GeneID:121352856"
ORIGIN      
        1 mfdcmdvlav spaqmldfyt aspsscmlqe kalkacfsgl aqtewqhrhs aqsvktqsts
       61 seelvpspps plppprvykp cfvcqdkssg yhygvsaceg ckgffrrsiq knmvytchrd
      121 kncvinkvtr nrcqycrlqk cfevgmskes vrndrnkkkk epskqesten yemtaelddl
      181 tekirkahqe tfpslcqlgk yttnssadhr vrldlglwdk fselatkcii kivefakrlp
      241 gftsltiadq itllkaacld ililrictry tpeqdtmtfs dgltlnrtqm hnagfgpltd
      301 lvftfanqll plemddtetg llsaiclicg drqdleepmk vdklqeplle alkiyirkrr
      361 pnkphmfpki lmkitdlrsi sakgaervit lkmeipgsmp pliqemlens eghepltpts
      421 ngntaehsps ispssvdnss vsqspmve
//
LOCUS       XP_041322106             336 aa            linear   VRT 06-MAY-2021
DEFINITION  retinoic acid receptor beta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322106
VERSION     XP_041322106.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466172.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="retinoic acid receptor beta isoform X2"
                     /calculated_mol_wt=37957
     Region          <1..47
                     /region_name="NR_DBD_like"
                     /note="DNA-binding domain of nuclear receptors is composed
                     of two C4-type zinc fingers; cl02596"
                     /db_xref="CDD:413390"
     Region          67..297
                     /region_name="NR_LBD_RAR"
                     /note="The ligand binding domain (LBD) of retinoic acid
                     receptor (RAR), a members of the nuclear receptor
                     superfamily; cd06937"
                     /db_xref="CDD:132735"
     Site            order(109,112..113,116,147,150..151,154,157,167..168,183,
                     275..276,279,295)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132735"
     Site            order(121,125,135,138..139,142..143,289..290,293..294)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132735"
     Site            order(196,218..219,230,233..234,237..238,241,245,256..257,
                     259..260,263,266..267)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:132735"
     CDS             1..336
                     /gene="RARB"
                     /coded_by="XM_041466172.1:522..1532"
                     /db_xref="GeneID:121352856"
ORIGIN      
        1 mvytchrdkn cvinkvtrnr cqycrlqkcf evgmskesvr ndrnkkkkep skqestenye
       61 mtaelddlte kirkahqetf pslcqlgkyt tnssadhrvr ldlglwdkfs elatkciiki
      121 vefakrlpgf tsltiadqit llkaacldil ilrictrytp eqdtmtfsdg ltlnrtqmhn
      181 agfgpltdlv ftfanqllpl emddtetgll saiclicgdr qdleepmkvd klqeplleal
      241 kiyirkrrpn kphmfpkilm kitdlrsisa kgaervitlk meipgsmppl iqemlenseg
      301 hepltptsng ntaehspsis pssvdnssvs qspmve
//
LOCUS       XP_041322108             419 aa            linear   VRT 06-MAY-2021
DEFINITION  basic leucine zipper and W2 domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322108
VERSION     XP_041322108.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466174.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="basic leucine zipper and W2 domain-containing
                     protein 2"
                     /calculated_mol_wt=48094
     Region          218..408
                     /region_name="W2_eIF5C_like"
                     /note="C-terminal W2 domain of the eukaryotic translation
                     initiation factor 5C and similar proteins; cd11560"
                     /db_xref="CDD:211398"
     CDS             1..419
                     /gene="BZW2"
                     /coded_by="XM_041466174.1:137..1396"
                     /db_xref="GeneID:121352857"
ORIGIN      
        1 mnknqkpvlt gqrfktrkrd ekekfeptvf rdtivqglne agndleaiak fldaagsrld
       61 yrryadtlfd ilvagsmlap ggtriddndk tkmtnhcvff adedhdairn yaqvfnklir
      121 rykylekafe deikklllfl kafteteqtk lamlsgilla ngtlpatilt slftdnivke
      181 giaasfavkl fkawmaekda nsvtsalrka nldkrllelf panrqnvdhf akyfteaglk
      241 elsdflrvqq slgtrkelqk elqerlsqec pikevvlyvk eemkrnelpe pavigllwtc
      301 vmnavewnkk eelvaeqalk hlkqyaplla vfstqgqsel illqkvqeyc ydnihfmkaf
      361 qkivvlfyka dvlseeailk wykeahvakg ksvfldqmkk fvewlqnaee esesegeen
//
LOCUS       XP_041322109             506 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and MYND domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322109
VERSION     XP_041322109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..506
                     /product="ankyrin repeat and MYND domain-containing
                     protein 2"
                     /calculated_mol_wt=55828
     Region          <64..177
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(65,68..69,71,73..74,78,82,91,93,95,99..100,103..105,
                     107..108,112,115,124,127,129,133..134,137..139,141..142,
                     146,149,158)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          93..124
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          127..158
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          368..405
                     /region_name="zf-MYND"
                     /note="MYND finger; pfam01753"
                     /db_xref="CDD:460312"
     CDS             1..506
                     /gene="ANKMY2"
                     /coded_by="XM_041466175.1:24..1544"
                     /db_xref="GeneID:121352858"
ORIGIN      
        1 mvrpavgpgr aglraegser sgavpvprag algapsrads alpcagaama pprkgdlsae
       61 ekdllaviat gnteeagrll gsknvrvncl dehgmtplmh aaykgkvdmc rlllrhgadv
      121 ncnehehgyt almfaglsgn keitwmmlea gaetdvvnsv grtaaqmaaf vgqhdcvtvi
      181 nnffprerld yytkpqgldk epklpvklag plhkiitttn mhpvkivllv kenpllaeve
      241 alqkcyrvld licekcmkqk dmnevlamkm hyiscifqkc itflkeredk ldgfiksllk
      301 grdkdgfpvy qekliresir kfpyceatll qqlvrsiapv eigsdptafs vltqaitgqv
      361 gfvdaefctt cggkgadkrc svckmvmycd qncqkihwft hkkvckilke ihekqeleaa
      421 kekrkqekkq kkdemqlveg sstseqqsdp gpdptknvdp nhptdgteep eftkemeala
      481 lqpdsplese talddidlqk iqdsee
//
LOCUS       XP_041322110             272 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 72 [Pyrgilauda ruficollis].
ACCESSION   XP_041322110
VERSION     XP_041322110.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466176.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..272
                     /product="leucine-rich repeat-containing protein 72"
                     /calculated_mol_wt=30839
     Region          30..48
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          48..86
                     /region_name="LRR_4"
                     /note="Leucine Rich repeats (2 copies); pfam12799"
                     /db_xref="CDD:463713"
     Region          49..67
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <71..175
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          71..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          94..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..272
                     /gene="LRRC72"
                     /coded_by="XM_041466176.1:1..819"
                     /db_xref="GeneID:121352859"
ORIGIN      
        1 maaaaaaggq aiekqlkicg yksnvdvval ylarqglksi pslsqfhrlr ylwinnnkiq
       61 dltfliknyy ltelylnnne ltdisgalkh lcslqilflh nnelkklgkt vkelkgmisl
      121 qtlnlfqnpl aydpdyrlyv iyflpsvqll drklvtqker esalhlynpk rawvmqsiaf
      181 gkradrslgt evgsgrctqp atrpimpsgh efgnntnkvp fedpedavlv ratarslmef
      241 ssvdwnkvat cqerrlqnka gepfekltvq fr
//
LOCUS       XP_041322111             204 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L15 [Pyrgilauda ruficollis].
ACCESSION   XP_041322111
VERSION     XP_041322111.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466177.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="60S ribosomal protein L15"
                     /calculated_mol_wt=24031
     Region          2..191
                     /region_name="Ribosomal_L15e"
                     /note="Ribosomal L15; pfam00827"
                     /db_xref="CDD:459950"
     CDS             1..204
                     /gene="RPL15"
                     /coded_by="XM_041466177.1:90..704"
                     /db_xref="GeneID:121352860"
ORIGIN      
        1 mgaykyiqel wrkkqsdvmr fllrvrcwqy rqlsalhrap rptrpdkarr lgykakqgyv
       61 iyrvrvrrgg rkrpvpkgat ygkpvhhgvn qlkfarslqs vaeeragrhc galrvlnsyw
      121 vgedstykff evilidpfhk tirrnpdtqw itkpvhkhre mrgltsagrk srglgkghkf
      181 hhtiggsrra awrrrntlql hryr
//
LOCUS       XP_041322112             204 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L15 [Pyrgilauda ruficollis].
ACCESSION   XP_041322112
VERSION     XP_041322112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466178.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="60S ribosomal protein L15"
                     /calculated_mol_wt=24031
     Region          2..191
                     /region_name="Ribosomal_L15e"
                     /note="Ribosomal L15; pfam00827"
                     /db_xref="CDD:459950"
     CDS             1..204
                     /gene="RPL15"
                     /coded_by="XM_041466178.1:49..663"
                     /db_xref="GeneID:121352860"
ORIGIN      
        1 mgaykyiqel wrkkqsdvmr fllrvrcwqy rqlsalhrap rptrpdkarr lgykakqgyv
       61 iyrvrvrrgg rkrpvpkgat ygkpvhhgvn qlkfarslqs vaeeragrhc galrvlnsyw
      121 vgedstykff evilidpfhk tirrnpdtqw itkpvhkhre mrgltsagrk srglgkghkf
      181 hhtiggsrra awrrrntlql hryr
//
LOCUS       XP_041322113             954 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-transporting ATPase type 2C member 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322113
VERSION     XP_041322113.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466179.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..954
                     /product="calcium-transporting ATPase type 2C member 1
                     isoform X1"
                     /calculated_mol_wt=104368
     Region          87..929
                     /region_name="P-type_ATPase_SPCA"
                     /note="golgi-associated secretory pathway Ca(2+) transport
                     ATPases, similar to human ATPase secretory pathway Ca(2+)
                     transporting 1/hSPCA1 and Saccharomyces cerevisiae
                     Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p; cd02085"
                     /db_xref="CDD:319779"
     Site            order(383..385,487,513..515,558,603..605,652,655,658,677,
                     680)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319779"
     Site            order(738,742..743,745..746,771,774..775)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319779"
     CDS             1..954
                     /gene="ATP2C1"
                     /coded_by="XM_041466179.1:151..3015"
                     /db_xref="GeneID:121352861"
ORIGIN      
        1 mdnllhksvf cfiklpihai wkllstvkak riqekvarlq kipdgdnetm ipvlsskkas
       61 elpvdevasi lqanlqnglk ncevchrraf hgwnefdise deplwkkyis qfknplimll
      121 lasavisvvm hqfddavsit vaivivvtva fvqeyrseks leelsklvpp echcvregrv
      181 ehtlardlvp gdtvclsvgd rvpadlrlfe avdlsidess ltgetapcsk stapqpaatn
      241 gdltsrsnia fmgtlvrcgk akgivigtge nsefgevfkm mqaeeapktp lqksmdllgk
      301 qlslysfgii gvimlvgwlq gkhildmfti gvslavaaip eglpivvtvt lalgvmrmvk
      361 kraivkklpi vetlgccnvi csdktgtltk nemtvthift sdgqhaevtg vgynrfgevm
      421 ldgevihgyn npsiskivea gcvcndalir nntlmgkpte galialamkm gldgvqedyi
      481 rkaeypfsse qkwmavkcih rtqqdkpevc fmkgayeqvi ryctsynckg qslplvqqqr
      541 eqyqqekvsm gsaglrvlal asgpelgqlt flglvgiidp prtgvkeavt tlitsgvaik
      601 mvtgdsqeta vaiasrlgly sknsqaisge eiddldiqql sqitpkvavf yrasprhklk
      661 iikslqnnga vvamtgdgvn davalkaadi gvamgqtgtd vckeaadmil vdddfqtims
      721 aieegkgiyn niknfvrfql stsiaaltli slatlmnfpn plnamqilwi niimdgppaq
      781 slgvepvdkd iirkpprnlk dsiltknlii kilvssiiiv cgtlfvfwre lrdnvitprd
      841 ttmtftcfvf fdmfnalssr sqtksvfeig lcsnkmfcya vlgsimgqll viyfpplqkv
      901 fqteslsvld llfllgltss vcivtelikk ferskekiqk rgssssstss fldv
//
LOCUS       XP_041322114             921 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-transporting ATPase type 2C member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322114
VERSION     XP_041322114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..921
                     /product="calcium-transporting ATPase type 2C member 1
                     isoform X2"
                     /calculated_mol_wt=100496
     Region          54..896
                     /region_name="P-type_ATPase_SPCA"
                     /note="golgi-associated secretory pathway Ca(2+) transport
                     ATPases, similar to human ATPase secretory pathway Ca(2+)
                     transporting 1/hSPCA1 and Saccharomyces cerevisiae
                     Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p; cd02085"
                     /db_xref="CDD:319779"
     Site            order(350..352,454,480..482,525,570..572,619,622,625,644,
                     647)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319779"
     Site            order(705,709..710,712..713,738,741..742)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319779"
     CDS             1..921
                     /gene="ATP2C1"
                     /coded_by="XM_041466180.1:398..3163"
                     /db_xref="GeneID:121352861"
ORIGIN      
        1 mkvarlqkip dgdnetmipv lsskkaselp vdevasilqa nlqnglknce vchrrafhgw
       61 nefdisedep lwkkyisqfk nplimlllas avisvvmhqf ddavsitvai vivvtvafvq
      121 eyrsekslee lsklvppech cvregrveht lardlvpgdt vclsvgdrvp adlrlfeavd
      181 lsidessltg etapcsksta pqpaatngdl tsrsniafmg tlvrcgkakg ivigtgense
      241 fgevfkmmqa eeapktplqk smdllgkqls lysfgiigvi mlvgwlqgkh ildmftigvs
      301 lavaaipegl pivvtvtlal gvmrmvkkra ivkklpivet lgccnvicsd ktgtltknem
      361 tvthiftsdg qhaevtgvgy nrfgevmldg evihgynnps iskiveagcv cndalirnnt
      421 lmgkptegal ialamkmgld gvqedyirka eypfsseqkw mavkcihrtq qdkpevcfmk
      481 gayeqviryc tsynckgqsl plvqqqreqy qqekvsmgsa glrvlalasg pelgqltflg
      541 lvgiidpprt gvkeavttli tsgvaikmvt gdsqetavai asrlglyskn sqaisgeeid
      601 dldiqqlsqi tpkvavfyra sprhklkiik slqnngavva mtgdgvndav alkaadigva
      661 mgqtgtdvck eaadmilvdd dfqtimsaie egkgiynnik nfvrfqlsts iaaltlisla
      721 tlmnfpnpln amqilwinii mdgppaqslg vepvdkdiir kpprnlkdsi ltknliikil
      781 vssiiivcgt lfvfwrelrd nvitprdttm tftcfvffdm fnalssrsqt ksvfeiglcs
      841 nkmfcyavlg simgqllviy fpplqkvfqt eslsvldllf llgltssvci vtelikkfer
      901 skekiqkrgs sssstssfld v
//
LOCUS       XP_041322115             921 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-transporting ATPase type 2C member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322115
VERSION     XP_041322115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..921
                     /product="calcium-transporting ATPase type 2C member 1
                     isoform X2"
                     /calculated_mol_wt=100496
     Region          54..896
                     /region_name="P-type_ATPase_SPCA"
                     /note="golgi-associated secretory pathway Ca(2+) transport
                     ATPases, similar to human ATPase secretory pathway Ca(2+)
                     transporting 1/hSPCA1 and Saccharomyces cerevisiae
                     Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p; cd02085"
                     /db_xref="CDD:319779"
     Site            order(350..352,454,480..482,525,570..572,619,622,625,644,
                     647)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319779"
     Site            order(705,709..710,712..713,738,741..742)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319779"
     CDS             1..921
                     /gene="ATP2C1"
                     /coded_by="XM_041466181.1:298..3063"
                     /db_xref="GeneID:121352861"
ORIGIN      
        1 mkvarlqkip dgdnetmipv lsskkaselp vdevasilqa nlqnglknce vchrrafhgw
       61 nefdisedep lwkkyisqfk nplimlllas avisvvmhqf ddavsitvai vivvtvafvq
      121 eyrsekslee lsklvppech cvregrveht lardlvpgdt vclsvgdrvp adlrlfeavd
      181 lsidessltg etapcsksta pqpaatngdl tsrsniafmg tlvrcgkakg ivigtgense
      241 fgevfkmmqa eeapktplqk smdllgkqls lysfgiigvi mlvgwlqgkh ildmftigvs
      301 lavaaipegl pivvtvtlal gvmrmvkkra ivkklpivet lgccnvicsd ktgtltknem
      361 tvthiftsdg qhaevtgvgy nrfgevmldg evihgynnps iskiveagcv cndalirnnt
      421 lmgkptegal ialamkmgld gvqedyirka eypfsseqkw mavkcihrtq qdkpevcfmk
      481 gayeqviryc tsynckgqsl plvqqqreqy qqekvsmgsa glrvlalasg pelgqltflg
      541 lvgiidpprt gvkeavttli tsgvaikmvt gdsqetavai asrlglyskn sqaisgeeid
      601 dldiqqlsqi tpkvavfyra sprhklkiik slqnngavva mtgdgvndav alkaadigva
      661 mgqtgtdvck eaadmilvdd dfqtimsaie egkgiynnik nfvrfqlsts iaaltlisla
      721 tlmnfpnpln amqilwinii mdgppaqslg vepvdkdiir kpprnlkdsi ltknliikil
      781 vssiiivcgt lfvfwrelrd nvitprdttm tftcfvffdm fnalssrsqt ksvfeiglcs
      841 nkmfcyavlg simgqllviy fpplqkvfqt eslsvldllf llgltssvci vtelikkfer
      901 skekiqkrgs sssstssfld v
//
LOCUS       XP_041322116             921 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-transporting ATPase type 2C member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322116
VERSION     XP_041322116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..921
                     /product="calcium-transporting ATPase type 2C member 1
                     isoform X2"
                     /calculated_mol_wt=100496
     Region          54..896
                     /region_name="P-type_ATPase_SPCA"
                     /note="golgi-associated secretory pathway Ca(2+) transport
                     ATPases, similar to human ATPase secretory pathway Ca(2+)
                     transporting 1/hSPCA1 and Saccharomyces cerevisiae
                     Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p; cd02085"
                     /db_xref="CDD:319779"
     Site            order(350..352,454,480..482,525,570..572,619,622,625,644,
                     647)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319779"
     Site            order(705,709..710,712..713,738,741..742)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319779"
     CDS             1..921
                     /gene="ATP2C1"
                     /coded_by="XM_041466182.1:241..3006"
                     /db_xref="GeneID:121352861"
ORIGIN      
        1 mkvarlqkip dgdnetmipv lsskkaselp vdevasilqa nlqnglknce vchrrafhgw
       61 nefdisedep lwkkyisqfk nplimlllas avisvvmhqf ddavsitvai vivvtvafvq
      121 eyrsekslee lsklvppech cvregrveht lardlvpgdt vclsvgdrvp adlrlfeavd
      181 lsidessltg etapcsksta pqpaatngdl tsrsniafmg tlvrcgkakg ivigtgense
      241 fgevfkmmqa eeapktplqk smdllgkqls lysfgiigvi mlvgwlqgkh ildmftigvs
      301 lavaaipegl pivvtvtlal gvmrmvkkra ivkklpivet lgccnvicsd ktgtltknem
      361 tvthiftsdg qhaevtgvgy nrfgevmldg evihgynnps iskiveagcv cndalirnnt
      421 lmgkptegal ialamkmgld gvqedyirka eypfsseqkw mavkcihrtq qdkpevcfmk
      481 gayeqviryc tsynckgqsl plvqqqreqy qqekvsmgsa glrvlalasg pelgqltflg
      541 lvgiidpprt gvkeavttli tsgvaikmvt gdsqetavai asrlglyskn sqaisgeeid
      601 dldiqqlsqi tpkvavfyra sprhklkiik slqnngavva mtgdgvndav alkaadigva
      661 mgqtgtdvck eaadmilvdd dfqtimsaie egkgiynnik nfvrfqlsts iaaltlisla
      721 tlmnfpnpln amqilwinii mdgppaqslg vepvdkdiir kpprnlkdsi ltknliikil
      781 vssiiivcgt lfvfwrelrd nvitprdttm tftcfvffdm fnalssrsqt ksvfeiglcs
      841 nkmfcyavlg simgqllviy fpplqkvfqt eslsvldllf llgltssvci vtelikkfer
      901 skekiqkrgs sssstssfld v
//
LOCUS       XP_041322117             921 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-transporting ATPase type 2C member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322117
VERSION     XP_041322117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..921
                     /product="calcium-transporting ATPase type 2C member 1
                     isoform X2"
                     /calculated_mol_wt=100496
     Region          54..896
                     /region_name="P-type_ATPase_SPCA"
                     /note="golgi-associated secretory pathway Ca(2+) transport
                     ATPases, similar to human ATPase secretory pathway Ca(2+)
                     transporting 1/hSPCA1 and Saccharomyces cerevisiae
                     Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p; cd02085"
                     /db_xref="CDD:319779"
     Site            order(350..352,454,480..482,525,570..572,619,622,625,644,
                     647)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319779"
     Site            order(705,709..710,712..713,738,741..742)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319779"
     CDS             1..921
                     /gene="ATP2C1"
                     /coded_by="XM_041466183.1:248..3013"
                     /db_xref="GeneID:121352861"
ORIGIN      
        1 mkvarlqkip dgdnetmipv lsskkaselp vdevasilqa nlqnglknce vchrrafhgw
       61 nefdisedep lwkkyisqfk nplimlllas avisvvmhqf ddavsitvai vivvtvafvq
      121 eyrsekslee lsklvppech cvregrveht lardlvpgdt vclsvgdrvp adlrlfeavd
      181 lsidessltg etapcsksta pqpaatngdl tsrsniafmg tlvrcgkakg ivigtgense
      241 fgevfkmmqa eeapktplqk smdllgkqls lysfgiigvi mlvgwlqgkh ildmftigvs
      301 lavaaipegl pivvtvtlal gvmrmvkkra ivkklpivet lgccnvicsd ktgtltknem
      361 tvthiftsdg qhaevtgvgy nrfgevmldg evihgynnps iskiveagcv cndalirnnt
      421 lmgkptegal ialamkmgld gvqedyirka eypfsseqkw mavkcihrtq qdkpevcfmk
      481 gayeqviryc tsynckgqsl plvqqqreqy qqekvsmgsa glrvlalasg pelgqltflg
      541 lvgiidpprt gvkeavttli tsgvaikmvt gdsqetavai asrlglyskn sqaisgeeid
      601 dldiqqlsqi tpkvavfyra sprhklkiik slqnngavva mtgdgvndav alkaadigva
      661 mgqtgtdvck eaadmilvdd dfqtimsaie egkgiynnik nfvrfqlsts iaaltlisla
      721 tlmnfpnpln amqilwinii mdgppaqslg vepvdkdiir kpprnlkdsi ltknliikil
      781 vssiiivcgt lfvfwrelrd nvitprdttm tftcfvffdm fnalssrsqt ksvfeiglcs
      841 nkmfcyavlg simgqllviy fpplqkvfqt eslsvldllf llgltssvci vtelikkfer
      901 skekiqkrgs sssstssfld v
//
LOCUS       XP_041322118             921 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-transporting ATPase type 2C member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322118
VERSION     XP_041322118.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466184.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..921
                     /product="calcium-transporting ATPase type 2C member 1
                     isoform X2"
                     /calculated_mol_wt=100496
     Region          54..896
                     /region_name="P-type_ATPase_SPCA"
                     /note="golgi-associated secretory pathway Ca(2+) transport
                     ATPases, similar to human ATPase secretory pathway Ca(2+)
                     transporting 1/hSPCA1 and Saccharomyces cerevisiae
                     Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p; cd02085"
                     /db_xref="CDD:319779"
     Site            order(350..352,454,480..482,525,570..572,619,622,625,644,
                     647)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319779"
     Site            order(705,709..710,712..713,738,741..742)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319779"
     CDS             1..921
                     /gene="ATP2C1"
                     /coded_by="XM_041466184.1:162..2927"
                     /db_xref="GeneID:121352861"
ORIGIN      
        1 mkvarlqkip dgdnetmipv lsskkaselp vdevasilqa nlqnglknce vchrrafhgw
       61 nefdisedep lwkkyisqfk nplimlllas avisvvmhqf ddavsitvai vivvtvafvq
      121 eyrsekslee lsklvppech cvregrveht lardlvpgdt vclsvgdrvp adlrlfeavd
      181 lsidessltg etapcsksta pqpaatngdl tsrsniafmg tlvrcgkakg ivigtgense
      241 fgevfkmmqa eeapktplqk smdllgkqls lysfgiigvi mlvgwlqgkh ildmftigvs
      301 lavaaipegl pivvtvtlal gvmrmvkkra ivkklpivet lgccnvicsd ktgtltknem
      361 tvthiftsdg qhaevtgvgy nrfgevmldg evihgynnps iskiveagcv cndalirnnt
      421 lmgkptegal ialamkmgld gvqedyirka eypfsseqkw mavkcihrtq qdkpevcfmk
      481 gayeqviryc tsynckgqsl plvqqqreqy qqekvsmgsa glrvlalasg pelgqltflg
      541 lvgiidpprt gvkeavttli tsgvaikmvt gdsqetavai asrlglyskn sqaisgeeid
      601 dldiqqlsqi tpkvavfyra sprhklkiik slqnngavva mtgdgvndav alkaadigva
      661 mgqtgtdvck eaadmilvdd dfqtimsaie egkgiynnik nfvrfqlsts iaaltlisla
      721 tlmnfpnpln amqilwinii mdgppaqslg vepvdkdiir kpprnlkdsi ltknliikil
      781 vssiiivcgt lfvfwrelrd nvitprdttm tftcfvffdm fnalssrsqt ksvfeiglcs
      841 nkmfcyavlg simgqllviy fpplqkvfqt eslsvldllf llgltssvci vtelikkfer
      901 skekiqkrgs sssstssfld v
//
LOCUS       XP_041322119             905 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-transporting ATPase type 2C member 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322119
VERSION     XP_041322119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..905
                     /product="calcium-transporting ATPase type 2C member 1
                     isoform X3"
                     /calculated_mol_wt=98698
     Region          38..880
                     /region_name="P-type_ATPase_SPCA"
                     /note="golgi-associated secretory pathway Ca(2+) transport
                     ATPases, similar to human ATPase secretory pathway Ca(2+)
                     transporting 1/hSPCA1 and Saccharomyces cerevisiae
                     Ca(2+)/Mn(2+)-transporting P-type ATPase, Pmr1p; cd02085"
                     /db_xref="CDD:319779"
     Site            order(334..336,438,464..466,509,554..556,603,606,609,628,
                     631)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319779"
     Site            order(689,693..694,696..697,722,725..726)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:319779"
     CDS             1..905
                     /gene="ATP2C1"
                     /coded_by="XM_041466185.1:491..3208"
                     /db_xref="GeneID:121352861"
ORIGIN      
        1 mipvlsskka selpvdevas ilqanlqngl kncevchrra fhgwnefdis edeplwkkyi
       61 sqfknpliml llasavisvv mhqfddavsi tvaivivvtv afvqeyrsek sleelsklvp
      121 pechcvregr vehtlardlv pgdtvclsvg drvpadlrlf eavdlsides sltgetapcs
      181 kstapqpaat ngdltsrsni afmgtlvrcg kakgivigtg ensefgevfk mmqaeeapkt
      241 plqksmdllg kqlslysfgi igvimlvgwl qgkhildmft igvslavaai peglpivvtv
      301 tlalgvmrmv kkraivkklp ivetlgccnv icsdktgtlt knemtvthif tsdgqhaevt
      361 gvgynrfgev mldgevihgy nnpsiskive agcvcndali rnntlmgkpt egalialamk
      421 mgldgvqedy irkaeypfss eqkwmavkci hrtqqdkpev cfmkgayeqv iryctsynck
      481 gqslplvqqq reqyqqekvs mgsaglrvla lasgpelgql tflglvgiid pprtgvkeav
      541 ttlitsgvai kmvtgdsqet avaiasrlgl ysknsqaisg eeiddldiqq lsqitpkvav
      601 fyrasprhkl kiikslqnng avvamtgdgv ndavalkaad igvamgqtgt dvckeaadmi
      661 lvdddfqtim saieegkgiy nniknfvrfq lstsiaaltl islatlmnfp nplnamqilw
      721 iniimdgppa qslgvepvdk diirkpprnl kdsiltknli ikilvssiii vcgtlfvfwr
      781 elrdnvitpr dttmtftcfv ffdmfnalss rsqtksvfei glcsnkmfcy avlgsimgql
      841 lviyfpplqk vfqteslsvl dllfllglts svcivtelik kferskekiq krgsssssts
      901 sfldv
//
LOCUS       XP_041322122             672 aa            linear   VRT 06-MAY-2021
DEFINITION  protein asteroid homolog 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322122
VERSION     XP_041322122.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466188.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..672
                     /product="protein asteroid homolog 1"
                     /calculated_mol_wt=74800
     Region          27..183
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     CDS             1..672
                     /gene="ASTE1"
                     /coded_by="XM_041466188.1:351..2369"
                     /db_xref="GeneID:121352863"
ORIGIN      
        1 mgvqgltgfv eergvfftel rvrdtklvid gsslyhrlcf apdadfrrgg dygafaaavs
       61 dffgalracg vapfvvldgg rgaedrklpt lrrraaeqlr aahglsrgag gclaplltre
      121 afvqalrrlg vpfvqcfaea dreiaglanr wgcpvlslds dffvfdlagg ycplshfqwq
      181 svrgsaaapq gcyvparcfs aerfcghfgr lskallplfa vmhgndfvdl ealeaffskv
      241 rlprgcaagr ggkhlrlqgl lnwlaqfaep aealdnvlky lkkhqreeir ellcasmedy
      301 apsdvnledf fqngsyecea arkadvpqwv ldalakgkla pfvinalilr stflrvqven
      361 mqrpsahsta lpirqviygl llrvshsted aspskqtnel pivcefdrcq ktlkktfvqa
      421 aslppdfcdd rfpldklmev pvscrqmlll etlgvkmsfl esipshlqlp vavtcywicr
      481 seprvklnql kalllmivsg elqritddpd ptvlpaedds vayneflkwk ekklqnndfd
      541 ldaahsfcqw qcclqmglyl nqllgtplse pdlsrlytgt lvhrlyqelk sapsvenlfl
      601 lspkmaqlyl gllntlesmv spdffqkmtk trsgsckkrk asskkktatr cavpetqhlc
      661 nvnrfaalev dd
//
LOCUS       XP_041322123             599 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase Nek11 [Pyrgilauda ruficollis].
ACCESSION   XP_041322123
VERSION     XP_041322123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466189.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..599
                     /product="serine/threonine-protein kinase Nek11"
                     /calculated_mol_wt=67809
     Region          28..287
                     /region_name="STKc_Nek11"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Never In Mitosis gene A (NIMA)-related kinase 11;
                     cd08222"
                     /db_xref="CDD:270861"
     Site            order(35..39,43,59,61,92,108..111,115,117,158,160,
                     162..163,165,175,178,180,194..197)
                     /site_type="active"
                     /db_xref="CDD:270861"
     Site            order(35..36,38..39,43,59,61,92,109..111,115,163,165,180)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270861"
     Site            order(39,115,117,158,160,162,178,194..197)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270861"
     Site            174..197
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270861"
     CDS             1..599
                     /gene="NEK11"
                     /coded_by="XM_041466189.1:1..1800"
                     /db_xref="GeneID:121352864"
ORIGIN      
        1 mlkfqetakh vtvarfnsac sdaviarryt iqrklgngsf gsvylvndrk akqgeelkvl
       61 keisvgnlkp netveanlea qllskldhpa ivkfyasfve rdsfciitey ceggdldfki
      121 qeykdsgkmf tqsqvidwfv qlllgvnymh errilhrdlk akniflkdnl lkigdfgvsc
      181 llmgscdlat tftgtpyyms pevlkhqgyn tksdiwslgc ilyemccmnh aftgqnflsv
      241 vlkivegetp slpdkypskl navlcsmlsk npslrpaaae ilkspyideq lqkiqykftn
      301 mtvkdkalnc qketaplfga vqkkvhlqtl qelsdvqkmt prermrlrkl naadekakkl
      361 kqlaeekyqe nikrmqefrs rnfqqlnvnv lhesdeqtsk clihsqpatm gsyvstgqde
      421 prgnetselg mseltdheip edpeiaeeyy kdefescsed seeeedaels wtasktnhqd
      481 sdmeamveyl esvlnssslg srtvtrvspg vpqglralns tmaetklkrm resaigklgv
      541 eafeavyscl kqareqnase eeirsslekl vsrasdcfev dqllyfeeql qasgphlql
//
LOCUS       XP_041322124            1083 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
            subunit A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322124
VERSION     XP_041322124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1083
                     /product="serine/threonine-protein phosphatase 6
                     regulatory ankyrin repeat subunit A isoform X1"
                     /calculated_mol_wt=115963
     Region          9..>127
                     /region_name="PTZ00322"
                     /note="6-phosphofructo-2-kinase/fructose-2,
                     6-biphosphatase; Provisional"
                     /db_xref="CDD:140343"
     Region          35..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          84..373
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          106..134
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(109..110,113..115,117..118,122,125,134,136,138,
                     142..143,146..148,150..151,155,158,167,169,171,175..176,
                     179..181,183..184,188,191,200)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          136..167
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          169..200
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          202..233
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          235..266
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          255..533
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          268..299
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          301..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          335..366
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          368..393
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          401..432
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(434,436,440..441,444..446,448..449,453,456,465,467,
                     469,473..474,477..479,481..482,486,489,498,500,502,
                     506..507,510..511,513..514,520,523,532)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          434..465
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          467..498
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          500..532
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          551..807
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          582..610
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          612..638
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(648,652..653,656..658,660..661,665,668,680,682,684,
                     688..689,692..694,696..697,701,704,713,715,717,721..722,
                     725..727,729..730,734,737,746)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          648..680
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          682..713
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          715..746
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          748..777
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          776..1011
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(817,819,823..824,827..829,831..832,836,839,850,852,
                     854,858..859,862..864,866..867,871,874,883,885,887,
                     891..892,895..897,899..900,904,908,917)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          817..850
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          852..883
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          885..917
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          919..986
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..1083
                     /gene="ANKRD28"
                     /coded_by="XM_041466190.1:1374..4625"
                     /db_xref="GeneID:121352865"
ORIGIN      
        1 msrvcivvle eeeddsptft snlpqenvsv hpspsgntlp plvqaifngd pdevralifk
       61 kedvnfqdne krtplhaaay lgdaeiiell ilsgarvnak dskwltplhr avascsedav
      121 qvllkhsadv nardknwqtp lhiaaankav kcaealvpll snvnvsdrag rtalhhaafs
      181 ghvemvslll srganinafd kkdrraihwa aymghidvvk llvthtaevt ckdkksytpl
      241 haaassgmis vvkylldlgv dmnepnaygn tplhvacyng qdvvvnelid cganvnqvne
      301 kgftplhfaa asthgalcle llvcngadvn ikskdgktpl hmtaihgrfs rsqtiiqnga
      361 eidcedkngn tplhiaaryg hellintlit sgadtakrgi hgmfplhlaa lsgfsdccrk
      421 llssgfdidt pddfgrtclh aaaaggnlec lnlllntgad fnkkdrfgrt plhyaaancn
      481 yqclfalvgs gasvndlder gctplhyaaa sdtdgkcley llrndanpgi rdkqgynavh
      541 ysaayghrlc leliasetpl dvlmetsgtd mlndsdnrap isplhlaayh ghhqalevlv
      601 qslldldvrn nngrtpldla afkghvecvd vlinqgasil vkdyvvkrtp ihaaatnghs
      661 eclrlligna epqnavdiqd gngqtplmls vlnghtdcvy sllnkganvd akdkwgrtal
      721 hrgavtghee cveallqhga ksllrdcrgr tpihlsaacg higvlgallq satsvdaapa
      781 madnhgytsl hwacynghds cvellleqev fqkmegnsfs plhcavindn egaaemlidt
      841 lgggivnstd skgrtplhaa aftdhveclq lllghsaqvn avdssgktpl mmaaengqtn
      901 tvevlvssak adltlqdnsk ntalhlacsk ghetsallil ekitdrnlin atnaalqtpl
      961 hvaarngltv vvqellgkga svlavdengy tpalacapnk dvadclalil atmmpvssss
     1021 tlpsltfnai nhytntsktv tfdslpimrs dhssyctfnn igraggypyt eedelndsds
     1081 ety
//
LOCUS       XP_041322125            1053 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
            subunit A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322125
VERSION     XP_041322125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466191.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1053
                     /product="serine/threonine-protein phosphatase 6
                     regulatory ankyrin repeat subunit A isoform X2"
                     /calculated_mol_wt=112868
     Region          10..61
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          11..38
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          40..71
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          54..343
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          76..104
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(79..80,83..85,87..88,92,95,104,106,108,112..113,
                     116..118,120..121,125,128,137,139,141,145..146,149..151,
                     153..154,158,161,170)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          106..137
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          139..170
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          172..203
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          205..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          225..503
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          238..269
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          271..302
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          305..336
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          338..363
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          371..402
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(404,406,410..411,414..416,418..419,423,426,435,437,
                     439,443..444,447..449,451..452,456,459,468,470,472,
                     476..477,480..482,485..486,490,493,502)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          404..435
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          437..468
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          470..502
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          521..777
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          552..580
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          582..608
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(618,622..623,626..628,630..631,635,638,650,652,654,
                     658..659,662..664,666..667,671,674,683,685,687,691..692,
                     695..697,699..700,704,707,716)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          618..650
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          652..683
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          685..716
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          718..747
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          746..981
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(787,789,793..794,797..799,801..802,806,809,820,822,
                     824,828..829,832..834,836..837,841,844,853,855,857,
                     861..862,865..867,869..870,874,878,887)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          787..820
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          822..853
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          855..887
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          889..956
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..1053
                     /gene="ANKRD28"
                     /coded_by="XM_041466191.1:17..3178"
                     /db_xref="GeneID:121352865"
ORIGIN      
        1 mvflklreqp plvqaifngd pdevralifk kedvnfqdne krtplhaaay lgdaeiiell
       61 ilsgarvnak dskwltplhr avascsedav qvllkhsadv nardknwqtp lhiaaankav
      121 kcaealvpll snvnvsdrag rtalhhaafs ghvemvslll srganinafd kkdrraihwa
      181 aymghidvvk llvthtaevt ckdkksytpl haaassgmis vvkylldlgv dmnepnaygn
      241 tplhvacyng qdvvvnelid cganvnqvne kgftplhfaa asthgalcle llvcngadvn
      301 ikskdgktpl hmtaihgrfs rsqtiiqnga eidcedkngn tplhiaaryg hellintlit
      361 sgadtakrgi hgmfplhlaa lsgfsdccrk llssgfdidt pddfgrtclh aaaaggnlec
      421 lnlllntgad fnkkdrfgrt plhyaaancn yqclfalvgs gasvndlder gctplhyaaa
      481 sdtdgkcley llrndanpgi rdkqgynavh ysaayghrlc leliasetpl dvlmetsgtd
      541 mlndsdnrap isplhlaayh ghhqalevlv qslldldvrn nngrtpldla afkghvecvd
      601 vlinqgasil vkdyvvkrtp ihaaatnghs eclrlligna epqnavdiqd gngqtplmls
      661 vlnghtdcvy sllnkganvd akdkwgrtal hrgavtghee cveallqhga ksllrdcrgr
      721 tpihlsaacg higvlgallq satsvdaapa madnhgytsl hwacynghds cvellleqev
      781 fqkmegnsfs plhcavindn egaaemlidt lgggivnstd skgrtplhaa aftdhveclq
      841 lllghsaqvn avdssgktpl mmaaengqtn tvevlvssak adltlqdnsk ntalhlacsk
      901 ghetsallil ekitdrnlin atnaalqtpl hvaarngltv vvqellgkga svlavdengy
      961 tpalacapnk dvadclalil atmmpvssss tlpsltfnai nhytntsktv tfdslpimrs
     1021 dhssyctfnn igraggypyt eedelndsds ety
//
LOCUS       XP_041322126            1053 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
            subunit A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322126
VERSION     XP_041322126.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466192.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1053
                     /product="serine/threonine-protein phosphatase 6
                     regulatory ankyrin repeat subunit A isoform X3"
                     /calculated_mol_wt=112868
     Region          10..61
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          11..38
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          40..71
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          54..343
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          76..104
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(79..80,83..85,87..88,92,95,104,106,108,112..113,
                     116..118,120..121,125,128,137,139,141,145..146,149..151,
                     153..154,158,161,170)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          106..137
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          139..170
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          172..203
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          205..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          225..503
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          238..269
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          271..302
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          305..336
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          338..363
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          371..402
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(404,406,410..411,414..416,418..419,423,426,435,437,
                     439,443..444,447..449,451..452,456,459,468,470,472,
                     476..477,480..482,485..486,490,493,502)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          404..435
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          437..468
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          470..502
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          521..777
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          552..580
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          582..608
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(618,622..623,626..628,630..631,635,638,650,652,654,
                     658..659,662..664,666..667,671,674,683,685,687,691..692,
                     695..697,699..700,704,707,716)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          618..650
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          652..683
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          685..716
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          718..747
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          746..981
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(787,789,793..794,797..799,801..802,806,809,820,822,
                     824,828..829,832..834,836..837,841,844,853,855,857,
                     861..862,865..867,869..870,874,878,887)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          787..820
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          822..853
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          855..887
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          889..956
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..1053
                     /gene="ANKRD28"
                     /coded_by="XM_041466192.1:31..3192"
                     /db_xref="GeneID:121352865"
ORIGIN      
        1 mvflklreqp plvqaifngd pdevralifk kedvnfqdne krtplhaaay lgdaeiiell
       61 ilsgarvnak dskwltplhr avascsedav qvllkhsadv nardknwqtp lhiaaankav
      121 kcaealvpll snvnvsdrag rtalhhaafs ghvemvslll srganinafd kkdrraihwa
      181 aymghidvvk llvthtaevt ckdkksytpl haaassgmis vvkylldlgv dmnepnaygn
      241 tplhvacyng qdvvvnelid cganvnqvne kgftplhfaa asthgalcle llvcngadvn
      301 ikskdgktpl hmtaihgrfs rsqtiiqnga eidcedkngn tplhiaaryg hellintlit
      361 sgadtakrgi hgmfplhlaa lsgfsdccrk llssgfdidt pddfgrtclh aaaaggnlec
      421 lnlllntgad fnkkdrfgrt plhyaaancn yqclfalvgs gasvndlder gctplhyaaa
      481 sdtdgkcley llrndanpgi rdkqgynavh ysaayghrlc leliasetpl dvlmetsgtd
      541 mlndsdnrap isplhlaayh ghhqalevlv qslldldvrn nngrtpldla afkghvecvd
      601 vlinqgasil vkdyvvkrtp ihaaatnghs eclrlligna epqnavdiqd gngqtplmls
      661 vlnghtdcvy sllnkganvd akdkwgrtal hrgavtghee cveallqhga ksllrdcrgr
      721 tpihlsaacg higvlgallq satsvdaapa madnhgytsl hwacynghds cvellleqev
      781 fqkmegnsfs plhcavindn egaaemlidt lgggivnstd skgrtplhaa aftdhveclq
      841 lllghsaqvn avdssgktpl mmaaengqtn tvevlvssak adltlqdnsk ntalhlacsk
      901 ghetsallil ekitdrnlin atnaalqtpl hvaarngltv vvqellgkga svlavdengy
      961 tpalacapnk dvadclalil atmmpvssss tlpsltfnai nhytntsktv tfdslpimrs
     1021 dhssyctfnn igraggypyt eedelndsds ety
//
LOCUS       XP_041322127            1049 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
            subunit A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322127
VERSION     XP_041322127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1049
                     /product="serine/threonine-protein phosphatase 6
                     regulatory ankyrin repeat subunit A isoform X4"
                     /calculated_mol_wt=112367
     Region          4..57
                     /region_name="Ank_4"
                     /note="Ankyrin repeats (many copies); pfam13637"
                     /db_xref="CDD:372654"
     Region          7..34
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          36..67
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          50..339
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          72..100
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(75..76,79..81,83..84,88,91,100,102,104,108..109,
                     112..114,116..117,121,124,133,135,137,141..142,145..147,
                     149..150,154,157,166)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          102..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          135..166
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          168..199
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          201..232
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          221..499
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          234..265
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          267..298
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          301..332
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          334..359
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          367..398
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(400,402,406..407,410..412,414..415,419,422,431,433,
                     435,439..440,443..445,447..448,452,455,464,466,468,
                     472..473,476..478,481..482,486,489,498)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          400..431
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          433..464
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          466..498
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          517..773
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          548..576
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          578..604
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(614,618..619,622..624,626..627,631,634,646,648,650,
                     654..655,658..660,662..663,667,670,679,681,683,687..688,
                     691..693,695..696,700,703,712)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          614..646
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          648..679
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          681..712
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          714..743
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          742..977
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(783,785,789..790,793..795,797..798,802,805,816,818,
                     820,824..825,828..830,832..833,837,840,849,851,853,
                     857..858,861..863,865..866,870,874,883)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          783..816
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          818..849
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          851..883
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          885..952
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..1049
                     /gene="ANKRD28"
                     /coded_by="XM_041466193.1:54..3203"
                     /db_xref="GeneID:121352865"
ORIGIN      
        1 mafympplvq aifngdpdev ralifkkedv nfqdnekrtp lhaaaylgda eiiellilsg
       61 arvnakdskw ltplhravas csedavqvll khsadvnard knwqtplhia aankavkcae
      121 alvpllsnvn vsdragrtal hhaafsghve mvslllsrga ninafdkkdr raihwaaymg
      181 hidvvkllvt htaevtckdk ksytplhaaa ssgmisvvky lldlgvdmne pnaygntplh
      241 vacyngqdvv vnelidcgan vnqvnekgft plhfaaasth galclellvc ngadvniksk
      301 dgktplhmta ihgrfsrsqt iiqngaeidc edkngntplh iaaryghell intlitsgad
      361 takrgihgmf plhlaalsgf sdccrkllss gfdidtpddf grtclhaaaa ggnleclnll
      421 lntgadfnkk drfgrtplhy aaancnyqcl falvgsgasv ndldergctp lhyaaasdtd
      481 gkcleyllrn danpgirdkq gynavhysaa yghrlcleli asetpldvlm etsgtdmlnd
      541 sdnrapispl hlaayhghhq alevlvqsll dldvrnnngr tpldlaafkg hvecvdvlin
      601 qgasilvkdy vvkrtpihaa atnghseclr llignaepqn avdiqdgngq tplmlsvlng
      661 htdcvyslln kganvdakdk wgrtalhrga vtgheecvea llqhgaksll rdcrgrtpih
      721 lsaacghigv lgallqsats vdaapamadn hgytslhwac ynghdscvel lleqevfqkm
      781 egnsfsplhc avindnegaa emlidtlggg ivnstdskgr tplhaaaftd hveclqlllg
      841 hsaqvnavds sgktplmmaa engqtntvev lvssakadlt lqdnskntal hlacskghet
      901 sallilekit drnlinatna alqtplhvaa rngltvvvqe llgkgasvla vdengytpal
      961 acapnkdvad clalilatmm pvsssstlps ltfnainhyt ntsktvtfds lpimrsdhss
     1021 yctfnnigra ggypyteede lndsdsety
//
LOCUS       XP_041322128             122 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-CoA-binding domain-containing protein 7, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322128
VERSION     XP_041322128.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466194.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..122
                     /product="acyl-CoA-binding domain-containing protein 7"
     Region          37..121
                     /region_name="ACBP"
                     /note="Acyl CoA binding protein (ACBP) binds thiol esters
                     of long fatty acids and coenzyme A in a one-to-one binding
                     mode with high specificity and affinity. Acyl-CoAs are
                     important intermediates in fatty lipid synthesis and fatty
                     acid degradation and play a...; cd00435"
                     /db_xref="CDD:238248"
     Site            order(45,48..49,51,54..55,57,60..61,63..64,67..68,85..86,
                     89..90,109)
                     /site_type="other"
                     /note="acyl-CoA binding pocket [chemical binding]"
                     /db_xref="CDD:238248"
     Site            order(49,64,67..68,90,109)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:238248"
     CDS             1..122
                     /gene="ACBD7"
                     /coded_by="XM_041466194.1:<1..370"
                     /codon_start=2
                     /db_xref="GeneID:121352866"
ORIGIN      
        1 gvttisnppg laqqhihlws rlelalldie epflffhqad fdgaaedvkk lktrptdeel
       61 kelygfykqa tvgdiniecp gmldlkgkak weawnlkkgl skedamnayi skaramveky
      121 gi
//
LOCUS       XP_041322129            1267 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 804B [Pyrgilauda ruficollis].
ACCESSION   XP_041322129
VERSION     XP_041322129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466195.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1267
                     /product="zinc finger protein 804B"
                     /calculated_mol_wt=140708
     Region          124..151
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          <1054..>1234
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1267
                     /gene="ZNF804B"
                     /coded_by="XM_041466195.1:117..3920"
                     /db_xref="GeneID:121352867"
ORIGIN      
        1 mcsgcrrlqc illlaaltra ldetgagtsl lrfrpllhag fcsgggrtaa aeepgcpptp
       61 rppargarma cylvissrhl snghyrgikg vfrgplckkg arspdyaeke kaaakaledv
      121 kanfycelcd kqyhkhqefd nhinsydhah kqrlkdlkqr efarnvasks wkdekkqeka
      181 lkrlhqlael rkqsecitas gpllkaprlv lekqqspggi flykgskfta nsqrtitseg
      241 qgfsrsilek qqliisrhhp paerhhalgn hisqmfpysn ntsqragvsf sfskkvplkl
      301 essasvfsen ceegndyses pnhkkkqtie gchsvtllee qqkasldkel pitqdqmdld
      361 nsasshvatk pkmlkendks ndkeseeklr dnpsfskvki pltnfsaslr qtekesklne
      421 seqfletpis sscqasnfct qlntykpsna hlpaqlselp rqpapeltcs snsnespgvi
      481 krersleite ttdgnmetle ketmvkevkp qalpflhvvs kdgttalqwp telllftkte
      541 pcisygcnpl yfdfrlslnh regkqneink asckelsknk tadeyepsgl ikhkqmsneq
      601 dnqllkpkkm kgslnprkak qkaesdigke mnkngqkcia dnlnenipkv payldvsqkd
      661 yvtekslytk slrrplkhhf hdcerktqni rnesisfsaf msriknsnse kchliyseek
      721 yesknysrsl qdvvscssdi sdsgkdssgs ffscksssnn sdsrsserss ssrisrcsss
      781 gsvsketdnc dnktkedaer gsnaepgkae tansnslngn sqsknfaacs sknlakdicg
      841 krksvtakll lervqskktq eqmhdperfs istgielkdh sqshfalqfs ssvddtamlp
      901 lpekvlskgk ndmrhneisl lknsvkknnt easeitnvtl spgtdydhcv lkdiiqietg
      961 yqnpsikrnt aikeqtnlfi sevqpfiqsc dpvpndfpga fpsnrysvan stetkeelhd
     1021 vnmdlnraeg ssdsfcdsam qrygdtlndl evyskstspp ltqqpitftp eevdkyrllq
     1081 lqaqqhiqkq llakhlkvlp apgpaafsat pavpalpvqq qatvttihht llqrfavsas
     1141 vhphgshlsl aplhplsqah fapislspla palipthpaf ltghplhlvs atplhpsplt
     1201 fpalphaayi palftphlnt vtpsaihpnh lvhplfqgqe phhyscsiqt qqlptakevf
     1261 svssyln
//
LOCUS       XP_041322131             275 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 106B [Pyrgilauda ruficollis].
ACCESSION   XP_041322131
VERSION     XP_041322131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466197.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="transmembrane protein 106B"
                     /calculated_mol_wt=30967
     Region          28..259
                     /region_name="DUF1356"
                     /note="Protein of unknown function (DUF1356); pfam07092"
                     /db_xref="CDD:462088"
     CDS             1..275
                     /gene="TMEM106B"
                     /coded_by="XM_041466197.1:149..976"
                     /db_xref="GeneID:121352868"
ORIGIN      
        1 mgkslshlpm htckedgydg ssvsdnvrng lvhsevhned srcgdvsqfp yveftgrdsv
       61 tcptcqgtgr iprgqenqlv alipysdqrl rprrtklyvt asvtvcllls glavfflfpr
      121 sidvqyigvk svyvtyeqer riiylnitnt lnitnnnyys vevanitaqv qfsktvigka
      181 rlnnitnigp ldmkqidymv ptviqdemsy mydfctlpsi kvhnivvmmq vtvttsylgh
      241 peqisqeryq yvdcggntty qlgqseylnv lqppq
//
LOCUS       XP_041322132             275 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 106B [Pyrgilauda ruficollis].
ACCESSION   XP_041322132
VERSION     XP_041322132.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466198.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="transmembrane protein 106B"
                     /calculated_mol_wt=30967
     Region          28..259
                     /region_name="DUF1356"
                     /note="Protein of unknown function (DUF1356); pfam07092"
                     /db_xref="CDD:462088"
     CDS             1..275
                     /gene="TMEM106B"
                     /coded_by="XM_041466198.1:147..974"
                     /db_xref="GeneID:121352868"
ORIGIN      
        1 mgkslshlpm htckedgydg ssvsdnvrng lvhsevhned srcgdvsqfp yveftgrdsv
       61 tcptcqgtgr iprgqenqlv alipysdqrl rprrtklyvt asvtvcllls glavfflfpr
      121 sidvqyigvk svyvtyeqer riiylnitnt lnitnnnyys vevanitaqv qfsktvigka
      181 rlnnitnigp ldmkqidymv ptviqdemsy mydfctlpsi kvhnivvmmq vtvttsylgh
      241 peqisqeryq yvdcggntty qlgqseylnv lqppq
//
LOCUS       XP_041322133             891 aa            linear   VRT 06-MAY-2021
DEFINITION  cilia- and flagella-associated protein 69 [Pyrgilauda ruficollis].
ACCESSION   XP_041322133
VERSION     XP_041322133.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466199.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..891
                     /product="cilia- and flagella-associated protein 69"
                     /calculated_mol_wt=100173
     Region          <757..873
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     CDS             1..891
                     /gene="CFAP69"
                     /coded_by="XM_041466199.1:1..2676"
                     /db_xref="GeneID:121352869"
ORIGIN      
        1 maelaatepp gpraafgpsr nggerrtnap daaqetqlrs mdlnhviall kdsgskdlek
       61 eqlktlkkvv khfenglplk dviqitailn lcaekmreqe afteplceli klfglpfqkk
      121 kssdevnysv evsqsiaqlg ylmlvpssqv kiqicksivs fynmelpgkl lsgyqptnpn
      181 ykiqmaeigg laeilvlsla lvenqltekl wvlkalqhls tsgiscgqmv raqaasrlcl
      241 clngadpsgq llfrssdilw nllekaskee vvdqlrslec vhalkdvfvd lmcgfrhcdh
      301 qlrndllvia tllaeepavp miesgfakil ivlatctevk lpnplvkgfk ltysyedfem
      361 kkllfnvigi lskdpsatql lrenhvmpal lyyvkqnrkp gfpdwsasqy eelqlhaiav
      421 lasvapvlvd kylscqantl llmflewcag qdpffgrgns fhgrggcgnk lpqmhyslra
      481 lrsvvalyhd avnidlcdqg aisqlldilk yaaekckeke dtvlleiqad ilfilsvlce
      541 sdvhrkelfs cegigilisf fkmdprklcs glgyncllls aldclwscvi gcymaedyfi
      601 dqrgvfllld llalkeknlc niilgilvel sdnceaalhm nvwqgkreqt aanlliqlwr
      661 qeeldlgvkr dqygkivdtk rpiatsfqkq qkvfpvpasc psfaimeise sirakvyslf
      721 cklgfenlpg lsakdlvtla iiqryidfki gevwseisse ikeefrpvts dekalklise
      781 vsentgrmvl alqtavlerq hheeiqeekk tykeiqatri qrdltnkswe nflartsnye
      841 alkkakmlqn klieaskyda efqnrtehst dipklqvtnk ksqrksrkin l
//
LOCUS       XP_041322134             273 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352870 [Pyrgilauda ruficollis].
ACCESSION   XP_041322134
VERSION     XP_041322134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466200.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="uncharacterized protein LOC121352870"
                     /calculated_mol_wt=28035
     CDS             1..273
                     /gene="LOC121352870"
                     /coded_by="XM_041466200.1:459..1280"
                     /db_xref="GeneID:121352870"
ORIGIN      
        1 mlgkgqaale iqapspakrk gegafpsstv tlgdelslra lcqpllrsal vtvnkghmli
       61 ggqcvtstav lgylatinqv tamtymsaar gwdlillplp stqsamlcag pgatrqyrhc
      121 qhppyeckht tapgtiaplm pghgavhrfp pspgahgvsv hsphragasa aregreqhga
      181 laaghgrpas larplpraqg hrgrrssstr rsvrlgpglc pgpaavswpr gcspcrwrga
      241 rqartgtgna asavtrgpgg arpggapppc dck
//
LOCUS       XP_041322135             573 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 1 group D member 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322135
VERSION     XP_041322135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466201.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..573
                     /product="nuclear receptor subfamily 1 group D member 2
                     isoform X1"
                     /calculated_mol_wt=63078
     Region          96..184
                     /region_name="NR_DBD_REV_ERB"
                     /note="DNA-binding domain of REV-ERB receptor-like is
                     composed of two C4-type zinc fingers; cd07166"
                     /db_xref="CDD:143540"
     Site            order(101,104,118,121,138,144,154,157)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143540"
     Site            order(110..113,119..120,122,124,126..127,151..152,155,158,
                     169,172..178)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143540"
     Site            order(169..170,174)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143540"
     Region          384..571
                     /region_name="NR_LBD_REV_ERB"
                     /note="The ligand binding domain of REV-ERB receptors,
                     members of the nuclear receptor superfamily; cd06940"
                     /db_xref="CDD:132738"
     Site            order(396,399,403,407,437,440..441,444,448,476..477,480,
                     562,565..566,569)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132738"
     Site            order(486,509..511,520,523..524,545..546,549..550,
                     553..554,556..557,560..561)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132738"
     CDS             1..573
                     /gene="NR1D2"
                     /coded_by="XM_041466201.1:278..1999"
                     /db_xref="GeneID:121352871"
ORIGIN      
        1 mevsaggvia yisssssass paschsessd sgfqsssspv psppnsssse ggcngrsseg
       61 sdgapksdrl eetiktnqss vagltkghng vtkfngmvll ckvcgdvasg fhygvhaceg
      121 ckgffrrsiq qniqykkclk nnncsimrmn rnrcqqcrfk kclsvgmsrd avrfgripkr
      181 ekqrmliemq samktmmnsq fsghlpneal aehqdqapqe dlsskpkqer etinspspap
      241 sadmakeevi gmvtrahkdt fmynqeqsqn paemmqpqsg ervsksteqy ilssehcvgg
      301 lggpqypdre qhlggqykgr samhypsghp vcftnshcvn ftsgypqrmc eripedgfsp
      361 nknatyscst ggrmhlvcpm sktphvdpnk sgheiweefs msftpavkev vefakripgf
      421 rdlsqhdqvn llkagtfevl mvrfaslfda kertvtflsg kkysvddlhs mgagdllnsm
      481 fefseklnal qlsdeemslf tavvlvsadr sgienvnsve alqetliral rtlimknhpn
      541 easiftklll klpdlrslnn mhseellafk vhp
//
LOCUS       XP_041322136             495 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor subfamily 1 group D member 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322136
VERSION     XP_041322136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="nuclear receptor subfamily 1 group D member 2
                     isoform X2"
                     /calculated_mol_wt=54136
     Region          306..493
                     /region_name="NR_LBD_REV_ERB"
                     /note="The ligand binding domain of REV-ERB receptors,
                     members of the nuclear receptor superfamily; cd06940"
                     /db_xref="CDD:132738"
     Site            order(318,321,325,329,359,362..363,366,370,398..399,402,
                     484,487..488,491)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132738"
     Site            order(408,431..433,442,445..446,467..468,471..472,
                     475..476,478..479,482..483)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:132738"
     CDS             1..495
                     /gene="NR1D2"
                     /coded_by="XM_041466202.1:278..1765"
                     /db_xref="GeneID:121352871"
ORIGIN      
        1 mevsaggvia yisssssass paschsessd sgfqsssspv psppnsssse ggcngrsseg
       61 sdgapksdrl eetiktnqss vagltkghng vttvrfgrip krekqrmlie mqsamktmmn
      121 sqfsghlpne alaehqdqap qedlsskpkq eretinspsp apsadmakee vigmvtrahk
      181 dtfmynqeqs qnpaemmqpq sgervskste qyilssehcv gglggpqypd reqhlggqyk
      241 grsamhypsg hpvcftnshc vnftsgypqr mceripedgf spnknatysc stggrmhlvc
      301 pmsktphvdp nksgheiwee fsmsftpavk evvefakrip gfrdlsqhdq vnllkagtfe
      361 vlmvrfaslf dakertvtfl sgkkysvddl hsmgagdlln smfefsekln alqlsdeems
      421 lftavvlvsa drsgienvns vealqetlir alrtlimknh pneasiftkl llklpdlrsl
      481 nnmhseella fkvhp
//
LOCUS       XP_041322137             408 aa            linear   VRT 06-MAY-2021
DEFINITION  probable acyl-CoA dehydrogenase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322137
VERSION     XP_041322137.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466203.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="probable acyl-CoA dehydrogenase 6"
                     /calculated_mol_wt=44879
     Region          29..402
                     /region_name="CaiA"
                     /note="Acyl-CoA dehydrogenase related to the alkylation
                     response protein AidB [Lipid transport and metabolism];
                     COG1960"
                     /db_xref="CDD:441563"
     CDS             1..408
                     /gene="LOC121352872"
                     /coded_by="XM_041466203.1:101..1327"
                     /db_xref="GeneID:121352872"
ORIGIN      
        1 malrgggrwa rlgsalrgrs sglrhagdtp qhrdlrealr kiidkdinpf vdkweeegqf
       61 pahkvfkilg qagflgvdkp teyggmgldf syhiavaeel gnihcggipm aigvqtgmat
      121 palarfgshe lkkqflvptv agdfvaclgv sevgagsdva nikttavrkg deyvinggkm
      181 witsgsqadw mcllantseg pphqnkslic lpmnlpgihi akkidklgmr ssdtaqiffe
      241 dvrvpcknli geegkgfmyq mlqfqeerlw gvasaltpme miiqetidyt rqrkvfgqpv
      301 lhnqtvhfrl aelatevell rsllhraval yvegnnvtkl asmaklksgr larevtdncl
      361 qfwggmgfts evlvsrlyrd lrlmsigggt detmlsiick ymdilprk
//
LOCUS       XP_041322139             115 aa            linear   VRT 06-MAY-2021
DEFINITION  BET1 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322139
VERSION     XP_041322139.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466205.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..115
                     /product="BET1 homolog"
                     /calculated_mol_wt=12741
     Region          26..82
                     /region_name="SNARE_Bet1"
                     /note="SNARE motif of Bet1; cd15853"
                     /db_xref="CDD:277206"
     Site            order(30..33,35..37,39..41,43..44,46..51,53..54,56..57,
                     60..61,63..65,67..69,71..72,74..75,78..79,81..82)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277206"
     Site            57
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277206"
     CDS             1..115
                     /gene="BET1"
                     /coded_by="XM_041466205.1:193..540"
                     /db_xref="GeneID:121352873"
ORIGIN      
        1 mrraglgdga aagsygytns gysvyeeend rlteslrtkv saikslsiei gtevknqnkm
       61 lsemendfds tggllgatmg rlrtlsrgsq tkllcymmlf slfvffviyw iiklr
//
LOCUS       XP_041322140              73 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322140
VERSION     XP_041322140.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466206.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..73
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-11"
                     /calculated_mol_wt=8212
     Region          12..72
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(12,15,19,22,26,31,33,36..37,40..41,44,53..54,64)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..73
                     /gene="LOC121352874"
                     /coded_by="XM_041466206.1:153..374"
                     /db_xref="GeneID:121352874"
ORIGIN      
        1 mpainiedls ekdklkmeve qlrkevkler qpvskcseei knyieersge dplvkgvped
       61 knpfkekggc via
//
LOCUS       XP_041322141              73 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322141
VERSION     XP_041322141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..73
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..73
                     /product="guanine nucleotide-binding protein
                     G(I)/G(S)/G(O) subunit gamma-11"
                     /calculated_mol_wt=8212
     Region          12..72
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(12,15,19,22,26,31,33,36..37,40..41,44,53..54,64)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     CDS             1..73
                     /gene="LOC121352874"
                     /coded_by="XM_041466207.1:149..370"
                     /db_xref="GeneID:121352874"
ORIGIN      
        1 mpainiedls ekdklkmeve qlrkevkler qpvskcseei knyieersge dplvkgvped
       61 knpfkekggc via
//
LOCUS       XP_041322142             890 aa            linear   VRT 06-MAY-2021
DEFINITION  metastasis-associated in colon cancer protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322142
VERSION     XP_041322142.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466208.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..890
                     /product="metastasis-associated in colon cancer protein 1"
                     /calculated_mol_wt=100505
     Region          691..771
                     /region_name="Death"
                     /note="Death Domain: a protein-protein interaction domain;
                     cd01670"
                     /db_xref="CDD:260017"
     Region          781..856
                     /region_name="Death"
                     /note="Death Domain: a protein-protein interaction domain;
                     cd01670"
                     /db_xref="CDD:260017"
     CDS             1..890
                     /gene="MACC1"
                     /coded_by="XM_041466208.1:1..2673"
                     /db_xref="GeneID:121352875"
ORIGIN      
        1 mssldtdrqa aqlktqrdsc kqpgcekkss lvereeeire enssssgtds issgeiprsr
       61 segtlidvdd rtpsdsynan eskldldidw pgvfkhaqsv sktnpfwnel sgsnpfvhdi
      121 aasnrnennk rlsilkeksy lfskissnrd sldssgdeld idcllrktsa rrsgrsksvs
      181 dfldivdnqr fnphktapqk ttasdltwlq ndreaykmaw lshrqltrsc ldleamshsp
      241 gwaqtqatdi hvvcklsheg gsvqlpdsdi nihvpvghvl pgefqevglk ailnpplscn
      301 nelsstvspl ieltlsnlnt seaiflevkv aakvksdpls qvmsdivcff slnkegpfkk
      361 lencyiyqdt iqvkltdlsh vmyaviavqa skiqppatnv wdyvhrtvsv giygpkyihp
      421 sftavftvfs hnyipgklti cdikkggksm ppvvfqlwgk htfllekpqd lnisliscdp
      481 dfqvkmedqs knikkeelkt gemvrqqflf smlgcremhf fvflvqikil kssqvtqfhv
      541 ttpdpapkls giinrpnrlq srkeiksapw llipaikypk fqdktlsvnt ygvalktvlr
      601 qnkidylley fkgdtiallg edkvkaigqt kikewyvgvl rrkiglvhck nikviskeqa
      661 mdtadseltt rnlveqialp fkkltyiysv vlstvsesvy dwralaevlg yshmslddfn
      721 eahidkeser vahvvkkmkq dchankkkrl flyelivall kidcqglvar ltqdtiilts
      781 avklgkswre laeklarltk qqieayevph hgrngavale mmwkpaydfl ytwaahygdg
      841 yrdvlqdlqs aldkmknpvt kqwreltgal ilvncmevlr asafskmeee
//
LOCUS       XP_041322143             797 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: dynein heavy chain 11, axonemal [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322143
VERSION     XP_041322143.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466209.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 16% of CDS bases
            frameshifts          :: corrected 7 indels
            internal stop codons :: corrected 5 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="LOW QUALITY PROTEIN: dynein heavy chain 11,
                     axonemal"
                     /calculated_mol_wt=88881
     Region          107..408
                     /region_name="AAA_6"
                     /note="Hydrolytic ATP binding site of dynein motor region;
                     pfam12774"
                     /db_xref="CDD:463697"
     Region          449..>602
                     /region_name="AAA_9"
                     /note="ATP-binding dynein motor region; pfam12781"
                     /db_xref="CDD:463702"
     Region          626..732
                     /region_name="Dynein_heavy"
                     /note="Dynein heavy chain region D6 P-loop domain;
                     pfam03028"
                     /db_xref="CDD:460782"
     Region          764..>793
                     /region_name="AAA_lid_11"
                     /note="Dynein heavy chain AAA lid domain; pfam18198"
                     /db_xref="CDD:465676"
     CDS             1..797
                     /gene="DNAH11"
                     /coded_by="XM_041466209.1:1..2394"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 9 bases in 6 codons;
                     deleted 1 base in 1 codon; substituted 5 bases at 5
                     genomic stop codons"
                     /db_xref="GeneID:121352876"
ORIGIN      
        1 mmnvlkrfle spentfisrk yveklksleq yedqtyslqe lekekvneii ksillllagi
       61 dqisgtqcvv mislqlqsfc llsqvchrwd dvqkqxfani chaqfqyfye ylgntpwqvi
      121 tsltdrcsit xsqvvhlavr gapagpagte ktgtmedlgc algmtvkifi yseymddeml
      181 nililsvgni skglvqtgxf eefnhllvev xsivavqkkp irdkirkkkk fvflsdnitl
      241 ksraxifitm ipacagqtel henlxtcaml vpdtelvsem mlaaegfiga cllarkfitf
      301 xplcrellpe qgcydwglha ikavlvisgs lkqgdknrpe dwvkyvsvlr dfnlhkivtd
      361 dipiftgvis dlfpsldvlr mgnlqseqmv kqstlelylq peenfilkdv swrssrqcvt
      421 lfvggiagng eerldpiatl rddatavaws negdrmaten ttaltncecx plmidpqqeg
      481 ikweknkyga glrvvslgqk gyvflktteg alafdetvli enmxvtidli ldpllgrhtv
      541 kkgryvkted kkcefkknfh lilhtklanp hykpqlqaqt tfinftvtrg rledqllaev
      601 vnarltknir rfkfrsffhp hhihgsgvde kckklgftid sgrfhnmslg qkremvakea
      661 lkkaaphgyw vlfqvsvklp llaewfrtld klleqynmxh pdfcvfisax papateehii
      721 pqgilensik itgepptrml anfhaalygs dqgilevhar egefksirfp lcnfhtsvpg
      781 rlklgprgwn gryqiss
//
LOCUS       XP_041322144             272 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial assembly of ribosomal large subunit protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322144
VERSION     XP_041322144.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466210.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..272
                     /product="mitochondrial assembly of ribosomal large
                     subunit protein 1"
                     /calculated_mol_wt=30066
     Region          136..235
                     /region_name="RsfS"
                     /note="Ribosomal silencing factor during starvation;
                     pfam02410"
                     /db_xref="CDD:460550"
     CDS             1..272
                     /gene="MALSU1"
                     /coded_by="XM_041466210.1:1..819"
                     /db_xref="GeneID:121352877"
ORIGIN      
        1 mggrhvlclw netchglfpg igtellpllh csggpstdlp qagqlptkqt ldsgnhqrhs
       61 phlypvppah prsqrpfrah elraqrhrpr alrssaarap pgrgcaavgg gagpvalgaa
      121 errqpadtvl pkfnidlava llrqenakdi cviqlspelk ycdyfiivsg fstrhlhama
      181 nymlktykhl keeggphtqi egketddwlc idfgnivvhf mlpetrevye leklwtlgpy
      241 ddqlaqmtpq slpkdfifgl tpnssdhlet rt
//
LOCUS       XP_041322145             424 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein C7orf31 homolog
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322145
VERSION     XP_041322145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466211.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 16% of CDS bases
            frameshifts          :: corrected 3 indels
            internal stop codons :: corrected 4 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     C7orf31 homolog"
                     /calculated_mol_wt=47227
     Region          7..240
                     /region_name="DUF4555"
                     /note="Domain of unknown function (DUF4555); pfam15093"
                     /db_xref="CDD:464498"
     CDS             1..424
                     /gene="CUNH7orf31"
                     /coded_by="XM_041466211.1:1..1275"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 6 bases in 3 codons;
                     substituted 4 bases at 4 genomic stop codons"
                     /db_xref="GeneID:121352878"
ORIGIN      
        1 mkhdnlllhn lpqhcqanee pevlsrtfnl nvvltpfqip ccptvskdsy kelrkflhcc
       61 klpxraqkkh gglalgvlpe dnxarekspy tfvngctpyg sgedpqpvgl pteqyydvtq
      121 vakrksdvcm ndellpkppd tlprslclpf ssshpypthi srytmfpnlr spdgxdtgin
      181 ssshqpfhpt issktfdmav lrktraqiql cfkelkynfs pritnmlqnt eralditths
      241 qvftgqnisa glsqvtppeg ctacllqgeh phesilqkqy sfrclhqysa fpllspatkr
      301 ghlsgrpkfe plpkfalsye dfkpryldht ilenpvslsa klpldvkheg sgillhrlch
      361 qetslpaxkp edgpreitlp ewipscevpq lqtvptelqh sfsmtaaqkh lynsvkgeek
      421 nphr
//
LOCUS       XP_041322146             652 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322146
VERSION     XP_041322146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466212.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..652
                     /product="peptide-N(4)-(N-acetyl-beta-
                     glucosaminyl)asparagine amidase isoform X1"
                     /calculated_mol_wt=73900
     Region          16..108
                     /region_name="PUB_PNGase"
                     /note="PNGase/UBA or UBX (PUB) domain of the P97 adaptor
                     protein Peptide:N-glycanase (PNGase); cd10459"
                     /db_xref="CDD:198417"
     Site            order(33,36..37,40,49..50,52..54,57,59,63)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198417"
     Region          271..350
                     /region_name="Transglut_core"
                     /note="Transglutaminase-like superfamily; pfam01841"
                     /db_xref="CDD:376628"
     Region          <334..>388
                     /region_name="Rad4"
                     /note="Rad4 transglutaminase-like domain; pfam03835"
                     /db_xref="CDD:427539"
     Region          453..649
                     /region_name="PAW"
                     /note="PNGase C-terminal domain, mannose-binding module
                     PAW; pfam04721"
                     /db_xref="CDD:461409"
     CDS             1..652
                     /gene="NGLY1"
                     /coded_by="XM_041466212.1:68..2026"
                     /db_xref="GeneID:121352880"
ORIGIN      
        1 maaalglsss pgspavselc qnrreiflea srllltyadn ilrnpyeeky rlirignpaf
       61 strllpvrga veclfemgfq egethlvfpk easieqlrki rdliagerss rlnesnqihr
      121 pgssetvsst qtaaqrpsrp vdsgfalarq qpeaslvqsl emaanilkti qtkfeglvlm
      181 yenpsvqqka laviplqelk skaqkklaqa tkldkgahvn eedflllell dwfktsffhw
      241 vnslpcsrcg gqtepksgyl lptdddlrwd asrvenhycn qcqlcnrfpr ynnpekllet
      301 rrgrcgewan cftlccravg fearyvwdht dhvwtevyss sqkrwlhcdp cenvcdkpll
      361 yetgwgkkls yiiafskdev vdvtwrysck heevlsrrta lseatlreti nalnrtrqks
      421 lsenrkkell ertivelvef ispktpkpge yggrtsgsma wrvargeigp ekrkevvfip
      481 sekektsklf hlvynvidds ytrisnnnek isgweagvwk aesvwrkvet dwkmvylark
      541 egsssasisw kfecksvglk idnisvrtss qtfqsgriqw rlhsptaeia ligadknlcs
      601 ysdfsgatev mleavlnggd geaawqhtql fresltgcge ncleimikls dl
//
LOCUS       XP_041322147             652 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322147
VERSION     XP_041322147.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466213.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..652
                     /product="peptide-N(4)-(N-acetyl-beta-
                     glucosaminyl)asparagine amidase isoform X1"
                     /calculated_mol_wt=73900
     Region          16..108
                     /region_name="PUB_PNGase"
                     /note="PNGase/UBA or UBX (PUB) domain of the P97 adaptor
                     protein Peptide:N-glycanase (PNGase); cd10459"
                     /db_xref="CDD:198417"
     Site            order(33,36..37,40,49..50,52..54,57,59,63)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198417"
     Region          271..350
                     /region_name="Transglut_core"
                     /note="Transglutaminase-like superfamily; pfam01841"
                     /db_xref="CDD:376628"
     Region          <334..>388
                     /region_name="Rad4"
                     /note="Rad4 transglutaminase-like domain; pfam03835"
                     /db_xref="CDD:427539"
     Region          453..649
                     /region_name="PAW"
                     /note="PNGase C-terminal domain, mannose-binding module
                     PAW; pfam04721"
                     /db_xref="CDD:461409"
     CDS             1..652
                     /gene="NGLY1"
                     /coded_by="XM_041466213.1:44..2002"
                     /db_xref="GeneID:121352880"
ORIGIN      
        1 maaalglsss pgspavselc qnrreiflea srllltyadn ilrnpyeeky rlirignpaf
       61 strllpvrga veclfemgfq egethlvfpk easieqlrki rdliagerss rlnesnqihr
      121 pgssetvsst qtaaqrpsrp vdsgfalarq qpeaslvqsl emaanilkti qtkfeglvlm
      181 yenpsvqqka laviplqelk skaqkklaqa tkldkgahvn eedflllell dwfktsffhw
      241 vnslpcsrcg gqtepksgyl lptdddlrwd asrvenhycn qcqlcnrfpr ynnpekllet
      301 rrgrcgewan cftlccravg fearyvwdht dhvwtevyss sqkrwlhcdp cenvcdkpll
      361 yetgwgkkls yiiafskdev vdvtwrysck heevlsrrta lseatlreti nalnrtrqks
      421 lsenrkkell ertivelvef ispktpkpge yggrtsgsma wrvargeigp ekrkevvfip
      481 sekektsklf hlvynvidds ytrisnnnek isgweagvwk aesvwrkvet dwkmvylark
      541 egsssasisw kfecksvglk idnisvrtss qtfqsgriqw rlhsptaeia ligadknlcs
      601 ysdfsgatev mleavlnggd geaawqhtql fresltgcge ncleimikls dl
//
LOCUS       XP_041322148             651 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322148
VERSION     XP_041322148.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466214.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..651
                     /product="peptide-N(4)-(N-acetyl-beta-
                     glucosaminyl)asparagine amidase isoform X2"
                     /calculated_mol_wt=73829
     Region          16..108
                     /region_name="PUB_PNGase"
                     /note="PNGase/UBA or UBX (PUB) domain of the P97 adaptor
                     protein Peptide:N-glycanase (PNGase); cd10459"
                     /db_xref="CDD:198417"
     Site            order(33,36..37,40,49..50,52..54,57,59,63)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:198417"
     Region          271..350
                     /region_name="Transglut_core"
                     /note="Transglutaminase-like superfamily; pfam01841"
                     /db_xref="CDD:376628"
     Region          <334..>388
                     /region_name="Rad4"
                     /note="Rad4 transglutaminase-like domain; pfam03835"
                     /db_xref="CDD:427539"
     Region          453..648
                     /region_name="PAW"
                     /note="PNGase C-terminal domain, mannose-binding module
                     PAW; pfam04721"
                     /db_xref="CDD:461409"
     CDS             1..651
                     /gene="NGLY1"
                     /coded_by="XM_041466214.1:44..1999"
                     /db_xref="GeneID:121352880"
ORIGIN      
        1 maaalglsss pgspavselc qnrreiflea srllltyadn ilrnpyeeky rlirignpaf
       61 strllpvrga veclfemgfq egethlvfpk easieqlrki rdliagerss rlnesnqihr
      121 pgssetvsst qtaaqrpsrp vdsgfalarq qpeaslvqsl emaanilkti qtkfeglvlm
      181 yenpsvqqka laviplqelk skaqkklaqa tkldkgahvn eedflllell dwfktsffhw
      241 vnslpcsrcg gqtepksgyl lptdddlrwd asrvenhycn qcqlcnrfpr ynnpekllet
      301 rrgrcgewan cftlccravg fearyvwdht dhvwtevyss sqkrwlhcdp cenvcdkpll
      361 yetgwgkkls yiiafskdev vdvtwrysck heevlsrrta lseatlreti nalnrtrqks
      421 lsenrkkell ertivelvef ispktpkpge yggrtsgsma wrvargeigp ekrkevvfip
      481 sekektsklf hlvynvidds ytrisnnnek isgweagvwk aesvwrkvet dwkmvylark
      541 egsssasisw kfecksvglk idnisvrtss qtfqsgriqw rlhsptaeia ligdknlcsy
      601 sdfsgatevm leavlnggdg eaawqhtqlf resltgcgen cleimiklsd l
//
LOCUS       XP_041322149             356 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 48 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322149
VERSION     XP_041322149.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466215.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="RNA-binding protein 48 isoform X1"
                     /calculated_mol_wt=39697
     Region          37..136
                     /region_name="RRM_RBM48"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 48 (RBM48) and similar proteins; cd12442"
                     /db_xref="CDD:409876"
     CDS             1..356
                     /gene="RBM48"
                     /coded_by="XM_041466215.1:3..1073"
                     /db_xref="GeneID:121352881"
ORIGIN      
        1 maagssggpg apcrhhaqlg acesrakyre gwrpravkvy tinlesryll iqgvpalgvm
       61 kelveqfaly gaieeyhald eypaeqftev ylikfkklqc arvakkkmde rsffgsllhv
      121 cyapefetvq etreklqdrr kyiakatnqr dcfvlrkieg pkkttsknse hdcpwstsgs
      181 siarnwdpsc fasspgishs taypsgnqnq slltpppydn ncaeisgyfg entsltpsvh
      241 pgghtppvsl mqqrmvpacn gidrfmprtt hlqerkrkre esnkfsligt sedntevvig
      301 pqlpeipkvd mddeslntsa tlirnklkev adsvstsvek pesssakpvv kqrrri
//
LOCUS       XP_041322151             321 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 48 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322151
VERSION     XP_041322151.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466217.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="RNA-binding protein 48 isoform X2"
                     /calculated_mol_wt=36054
     Region          3..101
                     /region_name="RRM_RBM48"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 48 (RBM48) and similar proteins; cd12442"
                     /db_xref="CDD:409876"
     CDS             1..321
                     /gene="RBM48"
                     /coded_by="XM_041466217.1:778..1743"
                     /db_xref="GeneID:121352881"
ORIGIN      
        1 msqvytinle srylliqgvp algvmkelve qfalygaiee yhaldeypae qftevylikf
       61 kklqcarvak kkmdersffg sllhvcyape fetvqetrek lqdrrkyiak atnqrdcfvl
      121 rkiegpkktt sknsehdcpw stsgssiarn wdpscfassp gishstayps gnqnqslltp
      181 ppydnncaei sgyfgentsl tpsvhpgght ppvslmqqrm vpacngidrf mprtthlqer
      241 krkreesnkf sligtsednt evvigpqlpe ipkvdmddes lntsatlirn klkevadsvs
      301 tsvekpesss akpvvkqrrr i
//
LOCUS       XP_041322152             297 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 48 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322152
VERSION     XP_041322152.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466218.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..297
                     /product="RNA-binding protein 48 isoform X3"
                     /calculated_mol_wt=33407
     Region          <1..77
                     /region_name="RRM_RBM48"
                     /note="RNA recognition motif (RRM) found in RNA-binding
                     protein 48 (RBM48) and similar proteins; cd12442"
                     /db_xref="CDD:409876"
     CDS             1..297
                     /gene="RBM48"
                     /coded_by="XM_041466218.1:579..1472"
                     /db_xref="GeneID:121352881"
ORIGIN      
        1 mkelveqfal ygaieeyhal deypaeqfte vylikfkklq carvakkkmd ersffgsllh
       61 vcyapefetv qetreklqdr rkyiakatnq rdcfvlrkie gpkkttskns ehdcpwstsg
      121 ssiarnwdps cfasspgish staypsgnqn qslltpppyd nncaeisgyf gentsltpsv
      181 hpgghtppvs lmqqrmvpac ngidrfmprt thlqerkrkr eesnkfslig tsedntevvi
      241 gpqlpeipkv dmddeslnts atlirnklke vadsvstsve kpesssakpv vkqrrri
//
LOCUS       XP_041322153             246 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM133B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322153
VERSION     XP_041322153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="protein FAM133B isoform X1"
                     /calculated_mol_wt=27992
     CDS             1..246
                     /gene="FAM133B"
                     /coded_by="XM_041466219.1:122..862"
                     /db_xref="GeneID:121352882"
ORIGIN      
        1 mgkrdnrvay mnpiamarar gpapnsgpti qdylnrprpt weevkeqlek kkkgsralae
       61 feekmnenwr kelekhrekl lggnessskk kekkkkekkk snrlssssss ssssdsssss
      121 sdsededkkq gkkrrkkkyr ssrkssastt sesesdskds tkkkrskedc ekekegknhh
      181 rkrkkadgpl ssesvsesdq teevqakkkk sneekektdk tkkrkkhkkh gkkkkkktag
      241 snsdse
//
LOCUS       XP_041322154             232 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM133B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322154
VERSION     XP_041322154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..232
                     /product="protein FAM133B isoform X2"
                     /calculated_mol_wt=26811
     CDS             1..232
                     /gene="FAM133B"
                     /coded_by="XM_041466220.1:122..820"
                     /db_xref="GeneID:121352882"
ORIGIN      
        1 mgkrdnrvay mnpiamarar gpapnsgpti qdylnrprpt weevkeqlek kkkgsralae
       61 feekmnenwr kelekhrekl lggnessskk kerkrkrkrr nligsssdse dedkkqgkkr
      121 rkkkyrssrk ssasttsese sdskdstkkk rskedcekek egknhhrkrk kadgplsses
      181 vsesdqteev qakkkksnee kektdktkkr kkhkkhgkkk kkktagsnsd se
//
LOCUS       XP_041322155             220 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM133B isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322155
VERSION     XP_041322155.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466221.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..220
                     /product="protein FAM133B isoform X3"
                     /calculated_mol_wt=25001
     CDS             1..220
                     /gene="FAM133B"
                     /coded_by="XM_041466221.1:122..784"
                     /db_xref="GeneID:121352882"
ORIGIN      
        1 mgkrdnrvay mnpiamarar gpapnsgpti qdylnrprpt weevkeqlek kkkgsralae
       61 feekmnenwr kelekhrekl lggnessskk kekkkkekkk snrlssssss ssssdsssss
      121 sdsededkkq gkkrrkkkyr ssrkssastt sesesdskds tkkkrskedc ekekegknhh
      181 rkrkkadgpl ssesvsesdq teevqakkkk sneekektar
//
LOCUS       XP_041322156             207 aa            linear   VRT 06-MAY-2021
DEFINITION  EF-hand calcium-binding domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322156
VERSION     XP_041322156.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466222.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="EF-hand calcium-binding domain-containing
                     protein 1"
                     /calculated_mol_wt=23418
     Region          <69..176
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..207
                     /gene="EFCAB1"
                     /coded_by="XM_041466222.1:511..1134"
                     /db_xref="GeneID:121352883"
ORIGIN      
        1 msrkgrkllv dsltrsakhf tkseveclvk lfdtlvakas sqfagagfdr tvfrdtlyna
       61 fgmtddvvld rvfstfdkdn tgcinvvewv eglavllrgt leekmkycfa iydlngdgyi
      121 skeemfqmlk hslliqpade epdegvkdlv eialkkmdyd hdgklsfvdf etavrdenll
      181 leafgpclpd iksimsfeqk ifreipk
//
LOCUS       XP_041322157             246 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: juxtaposed with another zinc finger protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322157
VERSION     XP_041322157.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466223.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 10% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="LOW QUALITY PROTEIN: juxtaposed with another
                     zinc finger protein 1"
                     /calculated_mol_wt=27574
     Region          <172..233
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..246
                     /gene="JAZF1"
                     /coded_by="XM_041466223.1:1..741"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121352884"
ORIGIN      
        1 mwhvilckni nvepsyiied cahtgcckct klnsvyvffi pdtdprvlek qelqqptyva
       61 lsyinrfmtd aarreqeslk kkiqpklslt lsstvsrgnv stpprhssgs ltppvtppit
      121 psssfrsstp tgseydeeev dyeesdsdes wttesaisse ailssmcmng gdekpfacpv
      181 pgckkryknv ngikyhakng hrtqirvrkp fkcrcgksyk taqglrhhti nfhppvsaei
      241 irkmqq
//
LOCUS       XP_041322158             781 aa            linear   VRT 06-MAY-2021
DEFINITION  catenin beta-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322158
VERSION     XP_041322158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466224.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..781
                     /product="catenin beta-1 isoform X1"
                     /calculated_mol_wt=85349
     Region          78..151
                     /region_name="CTNNAbd_CTNNB1"
                     /note="alpha-catenin binding domain found in catenin
                     beta-1 (CTNNB1) and similar proteins; cd21724"
                     /db_xref="CDD:439241"
     Site            order(83..86,90..91,93..95,98..99,102,120..122,124..125,
                     128..129,132,135..143)
                     /site_type="other"
                     /note="CNTTA binding site [polypeptide binding]"
                     /db_xref="CDD:439241"
     Region          142..>431
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          153..178
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          188..221
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          230..262
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          230..262
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Site            order(253,257,261,295,299,303,338,342,346)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          270..306
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          312..347
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          350..390
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          354..389
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          402..427
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(418,422,426,462,466,470,508,512,516)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          431..473
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          435..473
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          482..517
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          524..582
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          583..622
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          587..621
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          629..662
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..781
                     /gene="CTNNB1"
                     /coded_by="XM_041466224.1:95..2440"
                     /db_xref="GeneID:121352885"
ORIGIN      
        1 matqadlmel dmamepdrka avshwqqqsy ldsgihsgat ttapslsgkg npeeedvdtt
       61 qvlyeweqgf sqsftqeqva didgqyamtr aqrvraamfp etldegmqip stqfdaahpt
      121 nvqrlaepsq mlkhavvnli nyqddaelat raipeltkll ndedqvvvnk aavmvhqlsk
      181 keasrhaimr spqmvsaivr tmqntndvet arctagtlhn lshhreglla ifksggipal
      241 vkmlgspvds vlfyaittlh nlllhqegak mavrlagglq kmvallnktn vkflaittdc
      301 lqilaygnqe skliilasgg pqalvnimrt ytyekllwtt srvlkvlsvc ssnkpaivea
      361 ggmqalglhl tdpsqrlvqn clwtlrnlsd aatkqegmeg llgtlvqllg sddinvvtca
      421 agilsnltcn nyknkmmvcq vggiealvrt vlragdredi tepaicalrh ltsrhqeaem
      481 aqnavrlhyg lpvvvkllhp pshwplikat vglirnlalc panhaplreq gaiprlvqll
      541 vrahqdtqrr tsmggtqqqf vegvrmeeiv egctgalhil ardvhnrivi rglntiplfv
      601 qllyspieni qrvaagvlce laqdkeaaea ieaegatapl tellhsrneg vatyaaavlf
      661 rmsedkpqdy kkrlsvelts slfrtepmaw netadlgldi gaqgeplgyr pddpsyrsfh
      721 sggygqdalg mdpmmehemg ghhpgadypv dglpdlghaq dlmdglppgd snqlawfdtd
      781 l
//
LOCUS       XP_041322159             717 aa            linear   VRT 06-MAY-2021
DEFINITION  catenin beta-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322159
VERSION     XP_041322159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..717
                     /product="catenin beta-1 isoform X2"
                     /calculated_mol_wt=78399
     Region          78..151
                     /region_name="CTNNAbd_CTNNB1"
                     /note="alpha-catenin binding domain found in catenin
                     beta-1 (CTNNB1) and similar proteins; cd21724"
                     /db_xref="CDD:439241"
     Site            order(83..86,90..91,93..95,98..99,102,120..122,124..125,
                     128..129,132,135..143)
                     /site_type="other"
                     /note="CNTTA binding site [polypeptide binding]"
                     /db_xref="CDD:439241"
     Region          153..178
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          188..221
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          230..262
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          230..262
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          <231..>431
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Site            order(253,257,261,295,299,303,338,342,346)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          270..306
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          312..347
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          350..390
                     /region_name="ARM"
                     /note="Armadillo/beta-catenin-like repeats; smart00185"
                     /db_xref="CDD:214547"
     Region          354..389
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          402..427
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(418,422,426,462,466,470,508,512,516)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          431..473
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          435..473
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          482..517
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          524..582
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          583..622
                     /region_name="Arm"
                     /note="Armadillo/beta-catenin-like repeat; pfam00514"
                     /db_xref="CDD:425727"
     Region          587..621
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          629..662
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..717
                     /gene="CTNNB1"
                     /coded_by="XM_041466225.1:95..2248"
                     /db_xref="GeneID:121352885"
ORIGIN      
        1 matqadlmel dmamepdrka avshwqqqsy ldsgihsgat ttapslsgkg npeeedvdtt
       61 qvlyeweqgf sqsftqeqva didgqyamtr aqrvraamfp etldegmqip stqfdaahpt
      121 nvqrlaepsq mlkhavvnli nyqddaelat raipeltkll ndedqvvvnk aavmvhqlsk
      181 keasrhaimr spqmvsaivr tmqntndvet arctagtlhn lshhreglla ifksggipal
      241 vkmlgspvds vlfyaittlh nlllhqegak mavrlagglq kmvallnktn vkflaittdc
      301 lqilaygnqe skliilasgg pqalvnimrt ytyekllwtt srvlkvlsvc ssnkpaivea
      361 ggmqalglhl tdpsqrlvqn clwtlrnlsd aatkqegmeg llgtlvqllg sddinvvtca
      421 agilsnltcn nyknkmmvcq vggiealvrt vlragdredi tepaicalrh ltsrhqeaem
      481 aqnavrlhyg lpvvvkllhp pshwplikat vglirnlalc panhaplreq gaiprlvqll
      541 vrahqdtqrr tsmggtqqqf vegvrmeeiv egctgalhil ardvhnrivi rglntiplfv
      601 qllyspieni qrvaagvlce laqdkeaaea ieaegatapl tellhsrneg vatyaaavlf
      661 rmsedkpqdy kkrlsvelts slfrtepmaw netadlgldi gaqgeplgyr pdavsse
//
LOCUS       XP_041322160             332 aa            linear   VRT 06-MAY-2021
DEFINITION  deleted in azoospermia-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322160
VERSION     XP_041322160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466226.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..332
                     /product="deleted in azoospermia-like"
                     /calculated_mol_wt=36867
     Region          71..152
                     /region_name="RRM_DAZL"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     deleted in azoospermia-like (DAZL) proteins; cd12672"
                     /db_xref="CDD:410073"
     Site            order(74,77,79,106..109,111,115..118,120,145..152)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410073"
     Region          <76..275
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Site            order(89..90,93,109,111..114)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:410073"
     CDS             1..332
                     /gene="DAZL"
                     /coded_by="XM_041466226.1:1..999"
                     /db_xref="GeneID:121352887"
ORIGIN      
        1 maarlrpecr rllgsrqhav cafylrnvic dcgadasytl raahvetqrs sntegsaysa
       61 avtqgyvlpe gkimpntvfv ggidlrmnea eirsvfeqyg tvkevkvitd rsgvskgygf
      121 vsfldnvdvq kivesqinfh gkklklgpai rkqqnskdsc vhprqivlgp pptqfqsvwg
      181 nqnmetyvqp ppvmnpvtpy vqpypysssp avllkqqvpi gyqpaynyqa qpqwfagepr
      241 nyvvppapmy tsvnyhgsed pvfiqmecav pdlmqlpssp qkkcvdramq tvvsclsnpe
      301 nqltndfvsq dssvkegktf hfrkgktvhk ai
//
LOCUS       XP_041322161             357 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protein phosphatase 2C-like domain-containing
            protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322161
VERSION     XP_041322161.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466227.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 14% of CDS bases
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 3 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="LOW QUALITY PROTEIN: protein phosphatase 2C-like
                     domain-containing protein 1"
                     /calculated_mol_wt=39456
     CDS             1..357
                     /gene="PP2D1"
                     /coded_by="XM_041466227.1:1..1074"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 4 bases in 2 codons;
                     substituted 3 bases at 3 genomic stop codons"
                     /db_xref="GeneID:121352888"
ORIGIN      
        1 mcieatqwal mseaaqwvct sradsetrve earvgaddpa caaqltssvl alqhqvpglg
       61 talgvqrear eteligetga rswsgkiggt wgqegryklw laeklvltrv rslqylnstl
      121 lnslrhigrr fithlnflwi iplphhfani nnpgtskkan nslikaxlic xdknstwqrv
      181 medgfivldn hesrsdtcfl evldgchgvt atdtivaklp llfleqlshi dsshknknyk
      241 eqileffarl ikadyrekek nqamrrptrx qsimkvyaks fwrmxgflql grkevskvhw
      301 sgcsvxkrip seetdgtgee erkhpennth splartakgv agllhiaiid saafikt
//
LOCUS       XP_041322163             827 aa            linear   VRT 06-MAY-2021
DEFINITION  histone acetyltransferase KAT2B [Pyrgilauda ruficollis].
ACCESSION   XP_041322163
VERSION     XP_041322163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466229.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..827
                     /product="histone acetyltransferase KAT2B"
                     /calculated_mol_wt=93234
     Region          70..320
                     /region_name="PCAF_N"
                     /note="PCAF (P300/CBP-associated factor) N-terminal
                     domain; pfam06466"
                     /db_xref="CDD:461923"
     Region          482..815
                     /region_name="COG5076"
                     /note="Transcription factor involved in chromatin
                     remodeling, contains bromodomain [Chromatin structure and
                     dynamics / Transcription]"
                     /db_xref="CDD:227408"
     Region          722..821
                     /region_name="Bromo_gcn5_like"
                     /note="Bromodomain; Gcn5_like subfamily. Gcn5p is a
                     histone acetyltransferase (HAT) which mediates acetylation
                     of histones at lysine residues; such acetylation is
                     generally correlated with the activation of transcription.
                     Bromodomains are 110 amino acid long...; cd05509"
                     /db_xref="CDD:99941"
     Site            order(747,752,755,794,798,804)
                     /site_type="active"
                     /note="acetyllysine binding site [active]"
                     /db_xref="CDD:99941"
     CDS             1..827
                     /gene="KAT2B"
                     /coded_by="XM_041466229.1:1..2484"
                     /db_xref="GeneID:121352889"
ORIGIN      
        1 maaailrvav taagkpeasp asaadspgyp gsarageqgr ahrspaaagv aaggpvrsaa
       61 enpggagsar tagkkaqlra aprakklekl gvysackaee sckcngwknp nppptpprae
      121 lqqaavslae pcrscshala ahvshlenvs eeemnrllgi vldveylftc vhkeedadtk
      181 qvyfylfkll rkcilqmgkp vvegslespp fekpsieqgv nnfvqykfsh lpskerqtiv
      241 elakmflnri nywhletpsq rrlrspnddi agykvnytrw lcycnvpqfc dslpryettq
      301 vfgrtllrsv ftvmrrqlle qarqekdklp qekrtlilth fpkflsmlee evysqnspiw
      361 dqdfmvsssr tgqlgiqtvi npppvarsva ysaspssleq sntgnmspac kvssaldpnl
      421 gekrknnepy sledskrprv vgdipielin evmstitdpa amlgpetnfl sahsardeaa
      481 rleerrgvie fhvvgnslnq kpnkkimmwl vglqnvfshq lprmpkeyit rlvfdpkhkt
      541 lalikdgrvi ggicfrmfps qgfteivfca vtsneqvkgy gthlmnhlke yhikhnilnf
      601 ltyadeyaig yfkkqgfskd ikvpkakyvg yikdyegatl mgcelnprip ytefsviikk
      661 qkeiikklie rkqaqirkvy pglscfkdgv rqipiesipg iretgwkpsg kergkeskdp
      721 dqlystlkti lqqvkshqsa wpfmepvkrt eapgyyevir fpmdlktmse rlknryyvsk
      781 klfmadlqrv ftncreynpp eseyykcani lekffytkik eaglidk
//
LOCUS       XP_041322164             586 aa            linear   VRT 06-MAY-2021
DEFINITION  shugoshin 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322164
VERSION     XP_041322164.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466230.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="shugoshin 1"
                     /calculated_mol_wt=65750
     Region          535..557
                     /region_name="Shugoshin_C"
                     /note="Shugoshin C terminus; pfam07557"
                     /db_xref="CDD:462207"
     CDS             1..586
                     /gene="SGO1"
                     /coded_by="XM_041466230.1:1..1761"
                     /db_xref="GeneID:121352890"
ORIGIN      
        1 maetsrksfk dslsdikqrm rekrtqkwsr lgkttqfstv kakratnnsn kmkiiqannr
       61 dlalslqehk lklreaeati lqlrkdyhil kaqmfelqrn hrfqqeqqhv etrlsalnei
      121 iskvsqnlld svtllgpakn lcstdvnqrv lssgpgnscs vtesahsigp lkcaledgpv
      181 lpsgmeaggd rnsvskicve sdsdisftki ipsegqpsdf hlnntepele nvsssvkfgf
      241 gsvlpksvst rrhfstmrnp dvictglldh leapdsvkel seqdeirlee slekcateni
      301 naavphlnes kinselalrq ktsetaqfkl kcnsdlkqpe cksrqnpqrr kekhqkgkre
      361 wpltsqqrpg klgkeaskek qnflgdisda ydfhleesvh ltpfrqnkvn dsdtevedee
      421 dsaetnties sstagdsdds lyepykskpk krrssvdesp mlpirprskr claqheqklc
      481 heeetenkss dksikqpsep srghlcdvtn iavvlpgtgd aeivpegegp rspkrtrrsc
      541 tgtvnykeps ivgklrrgdp ftdtkflssp ifklkkdakr hsrkil
//
LOCUS       XP_041322165             975 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: serine/threonine-protein kinase Nek10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322165
VERSION     XP_041322165.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466231.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 3% of CDS bases
            frameshifts          :: corrected 3 indels
            internal stop codons :: corrected 10 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..975
                     /product="LOW QUALITY PROTEIN: serine/threonine-protein
                     kinase Nek10"
                     /calculated_mol_wt=110243
     Region          510..666
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..975
                     /gene="NEK10"
                     /coded_by="XM_041466231.1:1..2928"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons;
                     deleted 2 bases in 1 codon; substituted 10 bases at 10
                     genomic stop codons"
                     /db_xref="GeneID:121352891"
ORIGIN      
        1 mpdqdkklks tekaikkkkp pgismrdnsh lkrlqslfiv qsrnqqlpai yiesgqtsvt
       61 rtwqnvksne qksngqwqes teavelekfs vtyknernfs khpkhqlfqd ifttlvkdkl
      121 tcrqwviqap cihflrllvc lrllikdpcy qemlhslgei enlaqymetv anrylnyree
      181 qhnvdklvnm tykcnifqkl davrnqrexv iangahktlv nllfardshv ffgallalts
      241 xvecpecree iseivenllv ilqftaellx plcaesrvke qmkmyegvpv llsllhshhi
      301 kllwsivwil vqvcedpets veiwiwgrik qlhhmlqeer slvsnssigs lssanaagki
      361 qylhlsheps pdeiqenifs lqatccaavt xlvlnetnah qvaqanaiyt iaklilsnke
      421 rnaekasllq yyvlralrfl fsmernxhif erifptdlfe ilidighyvy dirayeglvl
      481 klnslkedil kqitesienm nkaptkhvgd yailehigsg vfgsvykcti emlnrekgyd
      541 drlyivielm egvplgeyfh slkekqqqft ddriwhifel flfvfklcla lrylhkdkri
      601 vhxdltpqnv mlgdkckvtl tsrtlcvvan vnrhlqsdps ravvgtmyep vpeglysekv
      661 sftikrencs iifpetdvkl tgyelekkld werrxiqxyf meanxntvty chqysilsqk
      721 ndklslhfss sgpascksef sentdlpvds cqsahgkgee rtyetilved yrtmekgglk
      781 slfsfvyagi slndnevdiv dnxsssslsn leepaigiik qsfsaserqp qirdyvdgsg
      841 srlxsavagi avsqrkvhei sdpvqqvlvq lhkiifsthl pplvxcnlks kiierfkksl
      901 fsqqnnpckl kseikkvcrl agghillpdd kkgilgtsgm aegmtyeqlq tlieevlees
      961 gyysfssyrt yrtgq
//
LOCUS       XP_041322166             765 aa            linear   VRT 06-MAY-2021
DEFINITION  SNF-related serine/threonine-protein kinase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322166
VERSION     XP_041322166.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466232.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..765
                     /product="SNF-related serine/threonine-protein kinase"
                     /calculated_mol_wt=84504
     Region          12..269
                     /region_name="STKc_SNRK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     SNF1-related kinase; cd14074"
                     /db_xref="CDD:270976"
     Site            order(22..26,30,43,45,76,92..95,99,101..102,104,138..139,
                     141,143..144,146,157..158,161,175..179,181,211..214)
                     /site_type="active"
                     /db_xref="CDD:270976"
     Site            order(22..25,30,43,45,76,92..95,99,143..144,146,157..158)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270976"
     Site            order(99,101..102,104,139,141,143,161,175..179,181,
                     211..214)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270976"
     Site            157..179
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270976"
     Region          288..335
                     /region_name="UBA_SNRK"
                     /note="UBA domain of SNF-related serine/threonine-protein
                     kinase (SNRK) and similar proteins mainly found in
                     metazoa; cd14339"
                     /db_xref="CDD:270524"
     CDS             1..765
                     /gene="SNRK"
                     /coded_by="XM_041466232.1:485..2782"
                     /db_xref="GeneID:121352892"
ORIGIN      
        1 magfkrgydg kiaglydldk tlgrghfavv klarhvftge kvavkvidkt kldtlatghl
       61 fqevrcmklv qhpnivrlye vidtqtklyl ilelgdggdm fdyimkheeg lnedlakkyf
      121 aqivhaisyc hklhvvhrdl kpenvvffek qglvkltdfg fsnkfqpgkk lttscgslay
      181 sapeillgde ydapavdiws lgvilfmlvc gqppfqeand setltmimdc kytvpphvsk
      241 eckdlitrml qrdpkrrasl eeienhawlq gvdpspatky niplvsyknl seeehnsiiq
      301 rmvlgdiadr dtivealetn kynhitatyf llaerilrek qekeiqtrsa spsnikaqfr
      361 qswptkidvp qdleddltat plshatvpqs spartaenvl nghrskalgd stkkeeipel
      421 agpalsavps vslkpttsgr kclfrveede eedeedkkpi slstqvvlrr kpsvtnrlts
      481 rksapvlnqi feegesddef dmdenlppkl srlkmniasp stvhkryhrr ksqgrgsscs
      541 ssetsdddse srrrldkdsg ftyswhrrds segppgsqgd gggqskpsng nggvdrtspg
      601 dnskgggsps gssggstntt sgstrrcags gnsmqlssrs agelveslkl mslclgsqih
      661 gstkyiidpq nnlsfssvkv qekstwkmci sssgsanqas slsslkffsd qmsdttnele
      721 rlknrnlkns vlqlplceki svniqrnpke gllctssqts cchvi
//
LOCUS       XP_041322167             381 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi-associated kinase 1A [Pyrgilauda ruficollis].
ACCESSION   XP_041322167
VERSION     XP_041322167.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466233.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="Golgi-associated kinase 1A"
                     /calculated_mol_wt=42401
     Region          57..378
                     /region_name="FAM198"
                     /note="FAM198 protein; pfam15051"
                     /db_xref="CDD:373510"
     CDS             1..381
                     /gene="GASK1A"
                     /coded_by="XM_041466233.1:1..1146"
                     /db_xref="GeneID:121352893"
ORIGIN      
        1 mkppapaavg vllalallal ihlppppdhs llplpasspp gppreaaaal rlerdtppwl
       61 saddlqkmwl lssgqviskt rvpahgqimr vrlravgdat gdakedvlaa spegdcqdgr
      121 cglikrpgdl yevlafhldr vlglnrslpa varrftsrll pysytdgalr piiwwapdlq
      181 hledanndqn scalgwlqyq emlqphrpmp vardapcssi phsewsrlal fdfllqvhdr
      241 ldryccgfqp dpsepcveem lhekcrnpae lvlvhilvrr sapsrlvfid nagrpqhpee
      301 klnfrllqgi dsfpaaavat lrsgrlqsll lqslrldrel wesqggaegl rpllrtidrr
      361 aqillrhiqe hdltvfedsp h
//
LOCUS       XP_041322168             508 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-responsive element-binding protein 5 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322168
VERSION     XP_041322168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466234.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="cyclic AMP-responsive element-binding protein 5
                     isoform X1"
                     /calculated_mol_wt=56848
     Region          377..436
                     /region_name="bZIP_ATF2"
                     /note="Basic leucine zipper (bZIP) domain of Activating
                     Transcription Factor-2 (ATF-2) and similar proteins: a
                     DNA-binding and dimerization domain; cd14687"
                     /db_xref="CDD:269835"
     Region          377..436
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269835"
     Site            order(378,382,384..386,389,391..393,395..397)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269835"
     Site            order(396,403..404,406..407,410..411,414,417..418,421,
                     424..425,427..428,431..432,435..436)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269835"
     CDS             1..508
                     /gene="CREB5"
                     /coded_by="XM_041466234.1:324..1850"
                     /db_xref="GeneID:121352894"
ORIGIN      
        1 miyeeskmnl eqerpfvcsa pgcsqrfpte dhlmihrhkh emtlkfpsik tdnmlsdqtp
       61 tptrflknce evglfndidc slehefrkaq eeennkrnis mhntvggama gpgshqltnt
      121 rmpnhdtsvv iqqampspqs ssvitqapst nrqigpvpgs lssllhlhnr qrqpmpasmp
      181 gtlpnptmpg ssavlmpmer qmsmnsnimg mqgpnlnnpc aspqvppmhs eakmrlkaal
      241 thhpaamsng nmntmghmme mmssrqdqtp hhhmhshphq hqtlpphhsy phqhqhpahh
      301 phpqphhqqn hphhhshshl hthpahhqts phpplhsggq aqvspaaqqm qptqtvqppq
      361 ptggrrrrvv dedpderrrk flernraaat rcrqkrkvwv mslekkaeel tqtnmqlqne
      421 vsmlknevaq lkqlllthkd cpitamqkes qgylspessp paspvpacsq qqviqhntit
      481 tsssvsdvvg sstltqlash rtdinpil
//
LOCUS       XP_041322169             508 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-responsive element-binding protein 5 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322169
VERSION     XP_041322169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="cyclic AMP-responsive element-binding protein 5
                     isoform X1"
                     /calculated_mol_wt=56848
     Region          377..436
                     /region_name="bZIP_ATF2"
                     /note="Basic leucine zipper (bZIP) domain of Activating
                     Transcription Factor-2 (ATF-2) and similar proteins: a
                     DNA-binding and dimerization domain; cd14687"
                     /db_xref="CDD:269835"
     Region          377..436
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269835"
     Site            order(378,382,384..386,389,391..393,395..397)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269835"
     Site            order(396,403..404,406..407,410..411,414,417..418,421,
                     424..425,427..428,431..432,435..436)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269835"
     CDS             1..508
                     /gene="CREB5"
                     /coded_by="XM_041466235.1:118..1644"
                     /db_xref="GeneID:121352894"
ORIGIN      
        1 miyeeskmnl eqerpfvcsa pgcsqrfpte dhlmihrhkh emtlkfpsik tdnmlsdqtp
       61 tptrflknce evglfndidc slehefrkaq eeennkrnis mhntvggama gpgshqltnt
      121 rmpnhdtsvv iqqampspqs ssvitqapst nrqigpvpgs lssllhlhnr qrqpmpasmp
      181 gtlpnptmpg ssavlmpmer qmsmnsnimg mqgpnlnnpc aspqvppmhs eakmrlkaal
      241 thhpaamsng nmntmghmme mmssrqdqtp hhhmhshphq hqtlpphhsy phqhqhpahh
      301 phpqphhqqn hphhhshshl hthpahhqts phpplhsggq aqvspaaqqm qptqtvqppq
      361 ptggrrrrvv dedpderrrk flernraaat rcrqkrkvwv mslekkaeel tqtnmqlqne
      421 vsmlknevaq lkqlllthkd cpitamqkes qgylspessp paspvpacsq qqviqhntit
      481 tsssvsdvvg sstltqlash rtdinpil
//
LOCUS       XP_041322170             508 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-responsive element-binding protein 5 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322170
VERSION     XP_041322170.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466236.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="cyclic AMP-responsive element-binding protein 5
                     isoform X1"
                     /calculated_mol_wt=56848
     Region          377..436
                     /region_name="bZIP_ATF2"
                     /note="Basic leucine zipper (bZIP) domain of Activating
                     Transcription Factor-2 (ATF-2) and similar proteins: a
                     DNA-binding and dimerization domain; cd14687"
                     /db_xref="CDD:269835"
     Region          377..436
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269835"
     Site            order(378,382,384..386,389,391..393,395..397)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269835"
     Site            order(396,403..404,406..407,410..411,414,417..418,421,
                     424..425,427..428,431..432,435..436)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269835"
     CDS             1..508
                     /gene="CREB5"
                     /coded_by="XM_041466236.1:767..2293"
                     /db_xref="GeneID:121352894"
ORIGIN      
        1 miyeeskmnl eqerpfvcsa pgcsqrfpte dhlmihrhkh emtlkfpsik tdnmlsdqtp
       61 tptrflknce evglfndidc slehefrkaq eeennkrnis mhntvggama gpgshqltnt
      121 rmpnhdtsvv iqqampspqs ssvitqapst nrqigpvpgs lssllhlhnr qrqpmpasmp
      181 gtlpnptmpg ssavlmpmer qmsmnsnimg mqgpnlnnpc aspqvppmhs eakmrlkaal
      241 thhpaamsng nmntmghmme mmssrqdqtp hhhmhshphq hqtlpphhsy phqhqhpahh
      301 phpqphhqqn hphhhshshl hthpahhqts phpplhsggq aqvspaaqqm qptqtvqppq
      361 ptggrrrrvv dedpderrrk flernraaat rcrqkrkvwv mslekkaeel tqtnmqlqne
      421 vsmlknevaq lkqlllthkd cpitamqkes qgylspessp paspvpacsq qqviqhntit
      481 tsssvsdvvg sstltqlash rtdinpil
//
LOCUS       XP_041322172             501 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-responsive element-binding protein 5 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322172
VERSION     XP_041322172.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466238.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="cyclic AMP-responsive element-binding protein 5
                     isoform X2"
                     /calculated_mol_wt=55967
     Region          370..429
                     /region_name="bZIP_ATF2"
                     /note="Basic leucine zipper (bZIP) domain of Activating
                     Transcription Factor-2 (ATF-2) and similar proteins: a
                     DNA-binding and dimerization domain; cd14687"
                     /db_xref="CDD:269835"
     Region          370..429
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269835"
     Site            order(371,375,377..379,382,384..386,388..390)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269835"
     Site            order(389,396..397,399..400,403..404,407,410..411,414,
                     417..418,420..421,424..425,428..429)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269835"
     CDS             1..501
                     /gene="CREB5"
                     /coded_by="XM_041466238.1:55..1560"
                     /db_xref="GeneID:121352894"
ORIGIN      
        1 mnleqerpfv csapgcsqrf ptedhlmihr hkhemtlkfp siktdnmlsd qtptptrflk
       61 nceevglfnd idcslehefr kaqeeennkr nismhntvgg amagpgshql tntrmpnhdt
      121 svviqqamps pqsssvitqa pstnrqigpv pgslssllhl hnrqrqpmpa smpgtlpnpt
      181 mpgssavlmp merqmsmnsn imgmqgpnln npcaspqvpp mhseakmrlk aalthhpaam
      241 sngnmntmgh mmemmssrqd qtphhhmhsh phqhqtlpph hsyphqhqhp ahhphpqphh
      301 qqnhphhhsh shlhthpahh qtsphpplhs ggqaqvspaa qqmqptqtvq ppqptggrrr
      361 rvvdedpder rrkflernra aatrcrqkrk vwvmslekka eeltqtnmql qnevsmlkne
      421 vaqlkqlllt hkdcpitamq kesqgylspe ssppaspvpa csqqqviqhn tittsssvsd
      481 vvgsstltql ashrtdinpi l
//
LOCUS       XP_041322173             369 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-responsive element-binding protein 5 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322173
VERSION     XP_041322173.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466239.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="cyclic AMP-responsive element-binding protein 5
                     isoform X3"
                     /calculated_mol_wt=40976
     Region          238..297
                     /region_name="bZIP_ATF2"
                     /note="Basic leucine zipper (bZIP) domain of Activating
                     Transcription Factor-2 (ATF-2) and similar proteins: a
                     DNA-binding and dimerization domain; cd14687"
                     /db_xref="CDD:269835"
     Region          238..297
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269835"
     Site            order(239,243,245..247,250,252..254,256..258)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269835"
     Site            order(257,264..265,267..268,271..272,275,278..279,282,
                     285..286,288..289,292..293,296..297)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269835"
     CDS             1..369
                     /gene="CREB5"
                     /coded_by="XM_041466239.1:5..1114"
                     /db_xref="GeneID:121352894"
ORIGIN      
        1 mfctsagnsg svmsmrpvpg slssllhlhn rqrqpmpasm pgtlpnptmp gssavlmpme
       61 rqmsmnsnim gmqgpnlnnp caspqvppmh seakmrlkaa lthhpaamsn gnmntmghmm
      121 emmssrqdqt phhhmhshph qhqtlpphhs yphqhqhpah hphpqphhqq nhphhhshsh
      181 lhthpahhqt sphpplhsgg qaqvspaaqq mqptqtvqpp qptggrrrrv vdedpderrr
      241 kflernraaa trcrqkrkvw vmslekkaee ltqtnmqlqn evsmlkneva qlkqlllthk
      301 dcpitamqke sqgylspess ppaspvpacs qqqviqhnti ttsssvsdvv gsstltqlas
      361 hrtdinpil
//
LOCUS       XP_041322174             623 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322174
VERSION     XP_041322174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="kelch repeat and BTB domain-containing protein
                     2"
                     /calculated_mol_wt=71099
     Region          5..137
                     /region_name="BTB_POZ_KBTBD2_BKLHD1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch repeat
                     and BTB domain-containing protein 2 (KBTBD2); cd18270"
                     /db_xref="CDD:349579"
     Region          23..516
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          128..223
                     /region_name="BACK_KBTBD2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 2 (KBTBD2);
                     cd18479"
                     /db_xref="CDD:350554"
     Region          310..366
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          374..415
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          419..456
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          459..516
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..623
                     /gene="KBTBD2"
                     /coded_by="XM_041466240.1:517..2388"
                     /db_xref="GeneID:121352895"
ORIGIN      
        1 mstqderqin teyavslleq lkffyeqqll tdivlivegt efpchkmvla tcssyframf
       61 msglseskqt hvhlrnvdaa tlqiiityay tgnlaisdst veqlyetacf lqvddvlqrc
      121 reylikkina encvrllsfa dlfsceelkq sakrmvehkf tavyhqeafm qlshdllidi
      181 lssdnlnvek eetvreaaml wleyntesrs qylssvlsqi ridalsevtq rawfqglppn
      241 dksvvvqgly ksmpkffkpr lgmtkeemmi fieaaaenpg slyssvcysp qaekvyklcn
      301 ppadlhkvgt lvtpdndiyi aggqvplknt ktnhsksskl qaafrtvncf ywfdaqqntw
      361 fpktpmlfvr ikpslvcceg yiyaiggdsv ggelnrrtve rydtekdewt mvsplpcawq
      421 wstavavhnc iyvmahnlmy cyfprsdawv emamrqtsrc fasaaafgdk ifyigglhia
      481 snsgirlpss tvdgssvtve iydvnknewr maanipakry sdpcvravvi snslcvfire
      541 thmnerakya tyqydleldr wflrqhiser vlwdlgkdfr ctvgklypsc leespwkppt
      601 ylfspdgade feldgemvtl ppv
//
LOCUS       XP_041322175             623 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322175
VERSION     XP_041322175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466241.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="kelch repeat and BTB domain-containing protein
                     2"
                     /calculated_mol_wt=71099
     Region          5..137
                     /region_name="BTB_POZ_KBTBD2_BKLHD1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch repeat
                     and BTB domain-containing protein 2 (KBTBD2); cd18270"
                     /db_xref="CDD:349579"
     Region          23..516
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          128..223
                     /region_name="BACK_KBTBD2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 2 (KBTBD2);
                     cd18479"
                     /db_xref="CDD:350554"
     Region          310..366
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          374..415
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          419..456
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          459..516
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..623
                     /gene="KBTBD2"
                     /coded_by="XM_041466241.1:656..2527"
                     /db_xref="GeneID:121352895"
ORIGIN      
        1 mstqderqin teyavslleq lkffyeqqll tdivlivegt efpchkmvla tcssyframf
       61 msglseskqt hvhlrnvdaa tlqiiityay tgnlaisdst veqlyetacf lqvddvlqrc
      121 reylikkina encvrllsfa dlfsceelkq sakrmvehkf tavyhqeafm qlshdllidi
      181 lssdnlnvek eetvreaaml wleyntesrs qylssvlsqi ridalsevtq rawfqglppn
      241 dksvvvqgly ksmpkffkpr lgmtkeemmi fieaaaenpg slyssvcysp qaekvyklcn
      301 ppadlhkvgt lvtpdndiyi aggqvplknt ktnhsksskl qaafrtvncf ywfdaqqntw
      361 fpktpmlfvr ikpslvcceg yiyaiggdsv ggelnrrtve rydtekdewt mvsplpcawq
      421 wstavavhnc iyvmahnlmy cyfprsdawv emamrqtsrc fasaaafgdk ifyigglhia
      481 snsgirlpss tvdgssvtve iydvnknewr maanipakry sdpcvravvi snslcvfire
      541 thmnerakya tyqydleldr wflrqhiser vlwdlgkdfr ctvgklypsc leespwkppt
      601 ylfspdgade feldgemvtl ppv
//
LOCUS       XP_041322176             623 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322176
VERSION     XP_041322176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466242.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="kelch repeat and BTB domain-containing protein
                     2"
                     /calculated_mol_wt=71099
     Region          5..137
                     /region_name="BTB_POZ_KBTBD2_BKLHD1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch repeat
                     and BTB domain-containing protein 2 (KBTBD2); cd18270"
                     /db_xref="CDD:349579"
     Region          23..516
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          128..223
                     /region_name="BACK_KBTBD2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 2 (KBTBD2);
                     cd18479"
                     /db_xref="CDD:350554"
     Region          310..366
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          374..415
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          419..456
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          459..516
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..623
                     /gene="KBTBD2"
                     /coded_by="XM_041466242.1:736..2607"
                     /db_xref="GeneID:121352895"
ORIGIN      
        1 mstqderqin teyavslleq lkffyeqqll tdivlivegt efpchkmvla tcssyframf
       61 msglseskqt hvhlrnvdaa tlqiiityay tgnlaisdst veqlyetacf lqvddvlqrc
      121 reylikkina encvrllsfa dlfsceelkq sakrmvehkf tavyhqeafm qlshdllidi
      181 lssdnlnvek eetvreaaml wleyntesrs qylssvlsqi ridalsevtq rawfqglppn
      241 dksvvvqgly ksmpkffkpr lgmtkeemmi fieaaaenpg slyssvcysp qaekvyklcn
      301 ppadlhkvgt lvtpdndiyi aggqvplknt ktnhsksskl qaafrtvncf ywfdaqqntw
      361 fpktpmlfvr ikpslvcceg yiyaiggdsv ggelnrrtve rydtekdewt mvsplpcawq
      421 wstavavhnc iyvmahnlmy cyfprsdawv emamrqtsrc fasaaafgdk ifyigglhia
      481 snsgirlpss tvdgssvtve iydvnknewr maanipakry sdpcvravvi snslcvfire
      541 thmnerakya tyqydleldr wflrqhiser vlwdlgkdfr ctvgklypsc leespwkppt
      601 ylfspdgade feldgemvtl ppv
//
LOCUS       XP_041322177             623 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322177
VERSION     XP_041322177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466243.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="kelch repeat and BTB domain-containing protein
                     2"
                     /calculated_mol_wt=71099
     Region          5..137
                     /region_name="BTB_POZ_KBTBD2_BKLHD1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch repeat
                     and BTB domain-containing protein 2 (KBTBD2); cd18270"
                     /db_xref="CDD:349579"
     Region          23..516
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          128..223
                     /region_name="BACK_KBTBD2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 2 (KBTBD2);
                     cd18479"
                     /db_xref="CDD:350554"
     Region          310..366
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          374..415
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          419..456
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          459..516
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..623
                     /gene="KBTBD2"
                     /coded_by="XM_041466243.1:672..2543"
                     /db_xref="GeneID:121352895"
ORIGIN      
        1 mstqderqin teyavslleq lkffyeqqll tdivlivegt efpchkmvla tcssyframf
       61 msglseskqt hvhlrnvdaa tlqiiityay tgnlaisdst veqlyetacf lqvddvlqrc
      121 reylikkina encvrllsfa dlfsceelkq sakrmvehkf tavyhqeafm qlshdllidi
      181 lssdnlnvek eetvreaaml wleyntesrs qylssvlsqi ridalsevtq rawfqglppn
      241 dksvvvqgly ksmpkffkpr lgmtkeemmi fieaaaenpg slyssvcysp qaekvyklcn
      301 ppadlhkvgt lvtpdndiyi aggqvplknt ktnhsksskl qaafrtvncf ywfdaqqntw
      361 fpktpmlfvr ikpslvcceg yiyaiggdsv ggelnrrtve rydtekdewt mvsplpcawq
      421 wstavavhnc iyvmahnlmy cyfprsdawv emamrqtsrc fasaaafgdk ifyigglhia
      481 snsgirlpss tvdgssvtve iydvnknewr maanipakry sdpcvravvi snslcvfire
      541 thmnerakya tyqydleldr wflrqhiser vlwdlgkdfr ctvgklypsc leespwkppt
      601 ylfspdgade feldgemvtl ppv
//
LOCUS       XP_041322178             623 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322178
VERSION     XP_041322178.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466244.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="kelch repeat and BTB domain-containing protein
                     2"
                     /calculated_mol_wt=71099
     Region          5..137
                     /region_name="BTB_POZ_KBTBD2_BKLHD1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch repeat
                     and BTB domain-containing protein 2 (KBTBD2); cd18270"
                     /db_xref="CDD:349579"
     Region          23..516
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          128..223
                     /region_name="BACK_KBTBD2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 2 (KBTBD2);
                     cd18479"
                     /db_xref="CDD:350554"
     Region          310..366
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          374..415
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          419..456
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          459..516
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..623
                     /gene="KBTBD2"
                     /coded_by="XM_041466244.1:378..2249"
                     /db_xref="GeneID:121352895"
ORIGIN      
        1 mstqderqin teyavslleq lkffyeqqll tdivlivegt efpchkmvla tcssyframf
       61 msglseskqt hvhlrnvdaa tlqiiityay tgnlaisdst veqlyetacf lqvddvlqrc
      121 reylikkina encvrllsfa dlfsceelkq sakrmvehkf tavyhqeafm qlshdllidi
      181 lssdnlnvek eetvreaaml wleyntesrs qylssvlsqi ridalsevtq rawfqglppn
      241 dksvvvqgly ksmpkffkpr lgmtkeemmi fieaaaenpg slyssvcysp qaekvyklcn
      301 ppadlhkvgt lvtpdndiyi aggqvplknt ktnhsksskl qaafrtvncf ywfdaqqntw
      361 fpktpmlfvr ikpslvcceg yiyaiggdsv ggelnrrtve rydtekdewt mvsplpcawq
      421 wstavavhnc iyvmahnlmy cyfprsdawv emamrqtsrc fasaaafgdk ifyigglhia
      481 snsgirlpss tvdgssvtve iydvnknewr maanipakry sdpcvravvi snslcvfire
      541 thmnerakya tyqydleldr wflrqhiser vlwdlgkdfr ctvgklypsc leespwkppt
      601 ylfspdgade feldgemvtl ppv
//
LOCUS       XP_041322179             113 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 1b [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322179
VERSION     XP_041322179.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466245.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..113
                     /product="eukaryotic translation initiation factor 1b"
                     /calculated_mol_wt=12693
     Region          3..113
                     /region_name="eIF1_SUI1_like"
                     /note="Eukaryotic initiation factor 1 and related
                     proteins; cl00229"
                     /db_xref="CDD:469673"
     Site            order(38,41..42,44,61,64..66,68..70,72,86,89)
                     /site_type="other"
                     /note="rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:211318"
     Site            88..89
                     /site_type="other"
                     /note="Mutations affecting start-site selection"
                     /db_xref="CDD:211318"
     CDS             1..113
                     /gene="EIF1B"
                     /coded_by="XM_041466245.1:297..638"
                     /db_xref="GeneID:121352896"
ORIGIN      
        1 mssiqnlqsf dpfadatkgd dllpagtedy ihiriqqrng rktlttvqgi addydkkklv
       61 kafkkkfacn gtviehpeyg eviqlqgdqr knicqfllei givkeeqlkv hgf
//
LOCUS       XP_041322180            1364 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-2(I) chain isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322180
VERSION     XP_041322180.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466246.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1364
                     /product="collagen alpha-2(I) chain isoform X1"
                     /calculated_mol_wt=128872
     Region          <22..>197
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <118..>327
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <381..>603
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <540..>756
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <818..>1042
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <1002..>1120
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1126..1363
                     /region_name="COLFI"
                     /note="Fibrillar collagen C-terminal domain; pfam01410"
                     /db_xref="CDD:460199"
     CDS             1..1364
                     /gene="COL1A2"
                     /coded_by="XM_041466246.1:116..4210"
                     /db_xref="GeneID:121352898"
ORIGIN      
        1 mlsfvdtriw lllavtsyla tgqhvsqpsa grkgprgdkg pqgergppgp pgrdgedglp
       61 gppgppgppg lggnfaaqyd pskaadfgpg pmglmgprgp pgasgppgpp gfqglpgepg
      121 epgqtgpqgp rgppgppgka gedghpgkpg rpgergvagp qgargfpgtp glpgfkgirg
      181 hngldgqkgq pgtpgtkgep gapgengtpg qpgarglpge rgrvgapgpa gargsdgsag
      241 ptgpagpiga agppgfpgap gakgeigpag nvgpsgpagp rgeiglpgss gpvgppgnpg
      301 anglpgakga aglpgvagap glpgprgilg ppgpagpsga rglvgepgpa gakgesgmkg
      361 epgaagpagp pgpsgeegkr gspgepgsag ppgpaglrgv pgsrglpgad gragvmgpag
      421 nrgasgpvga kgpngdagrp gepglmgprg lpgqpgspgp agkegpvgfp gadgrvgpig
      481 pagnrgepgn igfpgpkgpt gepgkpgekg nvglagprga pgpegnngaq gppgvtgnqg
      541 gkgetgpagp pgfqglpgps gpageagkpg erglhgefgv pgpagprger gppgesgavg
      601 pagpigsrgp sgppgpdgnk gepgnvgaag apgpagpggi pgergvagvp ggkgekgapg
      661 lrgdtgatgr dgarglpgai gapgpaggag drgeggpagp agpagargip gergepgpvg
      721 psgfagppga agqpgakger gpkgpkgetg ptgaigpiga sgppgpagaa gpagprgdag
      781 ppgmtgfpga agrvgppgpa gitgppgppg pagkdgprgl rgdvgpvgrt geqgiagppg
      841 fagekgpsge agaagppgtp gpqgilgapg ilglpgsrge rglpgisgat gepgplgvsg
      901 ppgargpsgp vgspgpngap geagrdgnpg ndgppgrdga pgfkgergap gnpgpsgalg
      961 apgphgqvgp sgkpgnrgep gpagavgpag afgprglagp qgprgekglp gdkgprglpg
     1021 lkghnglqgl pglagqhgdq gppgntgpag prgppgpsgp pgkdgrnglp gpigpagvrg
     1081 shgsqgpagp pgppgppgpp gpngggyevg fdaeyyradq pslrpkdyev datlktlnnq
     1141 ietlltpegs rknpartcrd lrlshpewss gfywidpnqg ctadairayc dfsngetciy
     1201 anpdnipakn wyinknpkdk kqhiwfgeti nggsqfeyns egvtskdmat qlafmrllan
     1261 hasqnityhc knsiaymdae tgnlkkavvl qgsndvelra egnsrftfsv ledgcsrknn
     1321 ewgktiieyr tnkpsrlpil diapldigga dqefgldigp vcfk
//
LOCUS       XP_041322181            1364 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-2(I) chain isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322181
VERSION     XP_041322181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466247.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1364
                     /product="collagen alpha-2(I) chain isoform X2"
                     /calculated_mol_wt=128872
     Region          <22..>197
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <118..>327
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <381..>603
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <540..>756
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <818..>1042
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <1002..>1120
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          1126..1363
                     /region_name="COLFI"
                     /note="Fibrillar collagen C-terminal domain; pfam01410"
                     /db_xref="CDD:460199"
     CDS             1..1364
                     /gene="COL1A2"
                     /coded_by="XM_041466247.1:175..4269"
                     /db_xref="GeneID:121352898"
ORIGIN      
        1 mlsfvdtriw lllavtsyla tgqhvsqpsa grkgprgdkg pqgergppgp pgrdgedglp
       61 gppgppgppg lggnfaaqyd pskaadfgpg pmglmgprgp pgasgppgpp gfqglpgepg
      121 epgqtgpqgp rgppgppgka gedghpgkpg rpgergvagp qgargfpgtp glpgfkgirg
      181 hngldgqkgq pgtpgtkgep gapgengtpg qpgarglpge rgrvgapgpa gargsdgsag
      241 ptgpagpiga agppgfpgap gakgeigpag nvgpsgpagp rgeiglpgss gpvgppgnpg
      301 anglpgakga aglpgvagap glpgprgilg ppgpagpsga rglvgepgpa gakgesgmkg
      361 epgaagpagp pgpsgeegkr gspgepgsag ppgpaglrgv pgsrglpgad gragvmgpag
      421 nrgasgpvga kgpngdagrp gepglmgprg lpgqpgspgp agkegpvgfp gadgrvgpig
      481 pagnrgepgn igfpgpkgpt gepgkpgekg nvglagprga pgpegnngaq gppgvtgnqg
      541 gkgetgpagp pgfqglpgps gpageagkpg erglhgefgv pgpagprger gppgesgavg
      601 pagpigsrgp sgppgpdgnk gepgnvgaag apgpagpggi pgergvagvp ggkgekgapg
      661 lrgdtgatgr dgarglpgai gapgpaggag drgeggpagp agpagargip gergepgpvg
      721 psgfagppga agqpgakger gpkgpkgetg ptgaigpiga sgppgpagaa gpagprgdag
      781 ppgmtgfpga agrvgppgpa gitgppgppg pagkdgprgl rgdvgpvgrt geqgiagppg
      841 fagekgpsge agaagppgtp gpqgilgapg ilglpgsrge rglpgisgat gepgplgvsg
      901 ppgargpsgp vgspgpngap geagrdgnpg ndgppgrdga pgfkgergap gnpgpsgalg
      961 apgphgqvgp sgkpgnrgep gpagavgpag afgprglagp qgprgekglp gdkgprglpg
     1021 lkghnglqgl pglagqhgdq gppgntgpag prgppgpsgp pgkdgrnglp gpigpagvrg
     1081 shgsqgpagp pgppgppgpp gpngggyevg fdaeyyradq pslrpkdyev datlktlnnq
     1141 ietlltpegs rknpartcrd lrlshpewss gfywidpnqg ctadairayc dfsngetciy
     1201 anpdnipakn wyinknpkdk kqhiwfgeti nggsqfeyns egvtskdmat qlafmrllan
     1261 hasqnityhc knsiaymdae tgnlkkavvl qgsndvelra egnsrftfsv ledgcsrknn
     1321 ewgktiieyr tnkpsrlpil diapldigga dqefgldigp vcfk
//
LOCUS       XP_041322182             393 aa            linear   VRT 06-MAY-2021
DEFINITION  5-azacytidine-induced protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322182
VERSION     XP_041322182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="5-azacytidine-induced protein 2 isoform X1"
                     /calculated_mol_wt=44908
     Region          40..>212
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          227..275
                     /region_name="TBD"
                     /note="TBD domain; pfam12845"
                     /db_xref="CDD:463729"
     CDS             1..393
                     /gene="AZI2"
                     /coded_by="XM_041466248.1:549..1730"
                     /db_xref="GeneID:121352899"
ORIGIN      
        1 mcesvmeelv eddicilnhe kadnahkrds dipvpsysgd esvashfalv tayedikkrl
       61 ketekensfl kkkvrileek vlgsrmeeec ssvgreqvnk ayqayreaci drdhlkskle
      121 kmakesaesl knlneqlqsk evellqlrte vetqqviksl nctqanwele klnsdlkvhs
      181 leqdleklke ecnslrkelq nskqkdqtqe enplhgdhlq kqdiqslqqi ywdlkremsn
      241 lrvvtdkqae vlrklkrspp gakkaactap vqcvdlnisk vnltsgvvyk nlsqndkalg
      301 navsppllrd arvpservtl qawtderpip adgktfqehh sygkssledn swvfpsppkp
      361 nenifwemkn nptllncpad yldqcnqncl hks
//
LOCUS       XP_041322183             391 aa            linear   VRT 06-MAY-2021
DEFINITION  5-azacytidine-induced protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322183
VERSION     XP_041322183.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466249.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="5-azacytidine-induced protein 2 isoform X2"
                     /calculated_mol_wt=44676
     Region          38..>210
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          225..273
                     /region_name="TBD"
                     /note="TBD domain; pfam12845"
                     /db_xref="CDD:463729"
     CDS             1..391
                     /gene="AZI2"
                     /coded_by="XM_041466249.1:549..1724"
                     /db_xref="GeneID:121352899"
ORIGIN      
        1 msvmeelved dicilnheka dnahkrdsdi pvpsysgdes vashfalvta yedikkrlke
       61 tekensflkk kvrileekvl gsrmeeecss vgreqvnkay qayreacidr dhlksklekm
      121 akesaeslkn lneqlqskev ellqlrteve tqqvikslnc tqanwelekl nsdlkvhsle
      181 qdleklkeec nslrkelqns kqkdqtqeen plhgdhlqkq diqslqqiyw dlkremsnlr
      241 vvtdkqaevl rklkrsppga kkaactapvq cvdlniskvn ltsgvvyknl sqndkalgna
      301 vsppllrdar vpservtlqa wtderpipad gktfqehhsy gksslednsw vfpsppkpne
      361 nifwemknnp tllncpadyl dqcnqnclhk s
//
LOCUS       XP_041322185             388 aa            linear   VRT 06-MAY-2021
DEFINITION  5-azacytidine-induced protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322185
VERSION     XP_041322185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="5-azacytidine-induced protein 2 isoform X3"
                     /calculated_mol_wt=44358
     Region          35..>207
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          222..270
                     /region_name="TBD"
                     /note="TBD domain; pfam12845"
                     /db_xref="CDD:463729"
     CDS             1..388
                     /gene="AZI2"
                     /coded_by="XM_041466251.1:287..1453"
                     /db_xref="GeneID:121352899"
ORIGIN      
        1 meelveddic ilnhekadna hkrdsdipvp sysgdesvas hfalvtayed ikkrlketek
       61 ensflkkkvr ileekvlgsr meeecssvgr eqvnkayqay reacidrdhl ksklekmake
      121 saeslknlne qlqskevell qlrtevetqq vikslnctqa nweleklnsd lkvhsleqdl
      181 eklkeecnsl rkelqnskqk dqtqeenplh gdhlqkqdiq slqqiywdlk remsnlrvvt
      241 dkqaevlrkl krsppgakka actapvqcvd lniskvnlts gvvyknlsqn dkalgnavsp
      301 pllrdarvps ervtlqawtd erpipadgkt fqehhsygks slednswvfp sppkpnenif
      361 wemknnptll ncpadyldqc nqnclhks
//
LOCUS       XP_041322186             107 aa            linear   VRT 06-MAY-2021
DEFINITION  COX assembly mitochondrial protein homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322186
VERSION     XP_041322186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..107
                     /product="COX assembly mitochondrial protein homolog"
                     /calculated_mol_wt=12221
     Region          22..90
                     /region_name="Cmc1"
                     /note="Cytochrome c oxidase biogenesis protein Cmc1 like;
                     pfam08583"
                     /db_xref="CDD:400756"
     CDS             1..107
                     /gene="CMC1"
                     /coded_by="XM_041466252.1:83..406"
                     /db_xref="GeneID:121352900"
ORIGIN      
        1 mepapgaaen aklrhvekdv lipqimrdra kelcsdkvqa ftkccqetgv lmvvkcrqen
       61 talkdclvgy ysdpsfyeec kaeylkqree yratgikkkr qkytpnv
//
LOCUS       XP_041322187             425 aa            linear   VRT 06-MAY-2021
DEFINITION  septin-7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322187
VERSION     XP_041322187.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466253.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="septin-7 isoform X1"
                     /calculated_mol_wt=49421
     Region          28..298
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            38..45
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(40..46,94,97,175..176,178,231..232)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            69..77
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            71
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            94..97
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(96..131,132..141)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            175..178
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            231..233
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     Region          325..>421
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..425
                     /gene="SEPTIN7"
                     /coded_by="XM_041466253.1:533..1810"
                     /db_xref="GeneID:121352901"
ORIGIN      
        1 mvaqqknleg yvgfanlpnq vyrksvkrgf eftlmvvges glgkstlins lfltelyspe
       61 ypgpshrikk tvqveqskvl ikeggvqlll tivdtpgfgd avdnsncwqp vidyidskfe
      121 dylnaesrvn rrqmpdnrvq cclyfiapsg hglkpldief mkrlhekvni ipliakadtl
      181 tpeecqqfkk qimkeiqehk ikiyefpetd deeenkivkk ikdrlplavv gsntiievng
      241 krvrgrqypw gvaevengeh cdftilrnml irthmqdlkd vtnnvhyeny rsrklaavty
      301 ngvdnnknkg qltkfdtveg msplaqmeee rrehvakmkk mememeqvfe mkvkekvqkl
      361 kdseaelqrr heqmkknlea qhkeleekrr qfedekanwe aqqrileqqn ssrtleknkk
      421 kgkif
//
LOCUS       XP_041322188             424 aa            linear   VRT 06-MAY-2021
DEFINITION  septin-7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322188
VERSION     XP_041322188.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466254.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="septin-7 isoform X2"
                     /calculated_mol_wt=49322
     Region          27..297
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            37..44
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(39..45,93,96,174..175,177,230..231)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            68..76
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            70
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            93..96
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(95..130,131..140)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            174..177
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            230..232
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     Region          324..>420
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..424
                     /gene="SEPTIN7"
                     /coded_by="XM_041466254.1:534..1808"
                     /db_xref="GeneID:121352901"
ORIGIN      
        1 maqqknlegy vgfanlpnqv yrksvkrgfe ftlmvvgesg lgkstlinsl fltelyspey
       61 pgpshrikkt vqveqskvli keggvqlllt ivdtpgfgda vdnsncwqpv idyidskfed
      121 ylnaesrvnr rqmpdnrvqc clyfiapsgh glkpldiefm krlhekvnii pliakadtlt
      181 peecqqfkkq imkeiqehki kiyefpetdd eeenkivkki kdrlplavvg sntiievngk
      241 rvrgrqypwg vaevengehc dftilrnmli rthmqdlkdv tnnvhyenyr srklaavtyn
      301 gvdnnknkgq ltkfdtvegm splaqmeeer rehvakmkkm ememeqvfem kvkekvqklk
      361 dseaelqrrh eqmkknleaq hkeleekrrq fedekanwea qqrileqqns srtleknkkk
      421 gkif
//
LOCUS       XP_041322189             418 aa            linear   VRT 06-MAY-2021
DEFINITION  septin-7 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322189
VERSION     XP_041322189.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466255.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="septin-7 isoform X3"
                     /calculated_mol_wt=48641
     Region          28..298
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            38..45
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(40..46,94,97,175..176,178,231..232)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            69..77
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            71
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            94..97
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(96..131,132..141)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            175..178
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            231..233
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     Region          318..>414
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..418
                     /gene="SEPTIN7"
                     /coded_by="XM_041466255.1:532..1788"
                     /db_xref="GeneID:121352901"
ORIGIN      
        1 mvaqqknleg yvgfanlpnq vyrksvkrgf eftlmvvges glgkstlins lfltelyspe
       61 ypgpshrikk tvqveqskvl ikeggvqlll tivdtpgfgd avdnsncwqp vidyidskfe
      121 dylnaesrvn rrqmpdnrvq cclyfiapsg hglkpldief mkrlhekvni ipliakadtl
      181 tpeecqqfkk qimkeiqehk ikiyefpetd deeenkivkk ikdrlplavv gsntiievng
      241 krvrgrqypw gvaevengeh cdftilrnml irthmqdlkd vtnnvhyeny rsrklaavty
      301 ngvdnnknkg qltksplaqm eeerrehvak mkkmememeq vfemkvkekv qklkdseael
      361 qrrheqmkkn leaqhkelee krrqfedeka nweaqqrile qqnssrtlek nkkkgkif
//
LOCUS       XP_041322190             296 aa            linear   VRT 06-MAY-2021
DEFINITION  biliverdin reductase A [Pyrgilauda ruficollis].
ACCESSION   XP_041322190
VERSION     XP_041322190.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466256.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="biliverdin reductase A"
                     /calculated_mol_wt=33413
     Region          2..120
                     /region_name="GFO_IDH_MocA"
                     /note="Oxidoreductase family, NAD-binding Rossmann fold;
                     pfam01408"
                     /db_xref="CDD:426248"
     Region          128..240
                     /region_name="Biliv-reduc_cat"
                     /note="Biliverdin reductase, catalytic; pfam09166"
                     /db_xref="CDD:462699"
     CDS             1..296
                     /gene="BLVRA"
                     /coded_by="XM_041466256.1:149..1039"
                     /db_xref="GeneID:121352902"
ORIGIN      
        1 mfgtvvvgvg iaglarirdl mnpmpsspse hlklfgfvsr rsfgnineak qisledalrn
       61 kdihaafist enksheetir mfleagkhvl veypmalsak aahelwemae qkgkvlhveh
      121 iellteeykq lkkevagkdl vkgtlhftgs vldenksgfp afsgiarltw lidlfgdltv
      181 tsatrekqkd kdysrmtvhf qtankkpltw ieergpgmrr ekkinfcfts gclenlpeap
      241 rssvglfmqd qnlfakkllg qvskeelaae kwrilrcldl aeviqqycee pekiys
//
LOCUS       XP_041322191             296 aa            linear   VRT 06-MAY-2021
DEFINITION  biliverdin reductase A [Pyrgilauda ruficollis].
ACCESSION   XP_041322191
VERSION     XP_041322191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="biliverdin reductase A"
                     /calculated_mol_wt=33413
     Region          2..120
                     /region_name="GFO_IDH_MocA"
                     /note="Oxidoreductase family, NAD-binding Rossmann fold;
                     pfam01408"
                     /db_xref="CDD:426248"
     Region          128..240
                     /region_name="Biliv-reduc_cat"
                     /note="Biliverdin reductase, catalytic; pfam09166"
                     /db_xref="CDD:462699"
     CDS             1..296
                     /gene="BLVRA"
                     /coded_by="XM_041466257.1:239..1129"
                     /db_xref="GeneID:121352902"
ORIGIN      
        1 mfgtvvvgvg iaglarirdl mnpmpsspse hlklfgfvsr rsfgnineak qisledalrn
       61 kdihaafist enksheetir mfleagkhvl veypmalsak aahelwemae qkgkvlhveh
      121 iellteeykq lkkevagkdl vkgtlhftgs vldenksgfp afsgiarltw lidlfgdltv
      181 tsatrekqkd kdysrmtvhf qtankkpltw ieergpgmrr ekkinfcfts gclenlpeap
      241 rssvglfmqd qnlfakkllg qvskeelaae kwrilrcldl aeviqqycee pekiys
//
LOCUS       XP_041322192             296 aa            linear   VRT 06-MAY-2021
DEFINITION  biliverdin reductase A [Pyrgilauda ruficollis].
ACCESSION   XP_041322192
VERSION     XP_041322192.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466258.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="biliverdin reductase A"
                     /calculated_mol_wt=33413
     Region          2..120
                     /region_name="GFO_IDH_MocA"
                     /note="Oxidoreductase family, NAD-binding Rossmann fold;
                     pfam01408"
                     /db_xref="CDD:426248"
     Region          128..240
                     /region_name="Biliv-reduc_cat"
                     /note="Biliverdin reductase, catalytic; pfam09166"
                     /db_xref="CDD:462699"
     CDS             1..296
                     /gene="BLVRA"
                     /coded_by="XM_041466258.1:72..962"
                     /db_xref="GeneID:121352902"
ORIGIN      
        1 mfgtvvvgvg iaglarirdl mnpmpsspse hlklfgfvsr rsfgnineak qisledalrn
       61 kdihaafist enksheetir mfleagkhvl veypmalsak aahelwemae qkgkvlhveh
      121 iellteeykq lkkevagkdl vkgtlhftgs vldenksgfp afsgiarltw lidlfgdltv
      181 tsatrekqkd kdysrmtvhf qtankkpltw ieergpgmrr ekkinfcfts gclenlpeap
      241 rssvglfmqd qnlfakkllg qvskeelaae kwrilrcldl aeviqqycee pekiys
//
LOCUS       XP_041322193             296 aa            linear   VRT 06-MAY-2021
DEFINITION  biliverdin reductase A [Pyrgilauda ruficollis].
ACCESSION   XP_041322193
VERSION     XP_041322193.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466259.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="biliverdin reductase A"
                     /calculated_mol_wt=33413
     Region          2..120
                     /region_name="GFO_IDH_MocA"
                     /note="Oxidoreductase family, NAD-binding Rossmann fold;
                     pfam01408"
                     /db_xref="CDD:426248"
     Region          128..240
                     /region_name="Biliv-reduc_cat"
                     /note="Biliverdin reductase, catalytic; pfam09166"
                     /db_xref="CDD:462699"
     CDS             1..296
                     /gene="BLVRA"
                     /coded_by="XM_041466259.1:49..939"
                     /db_xref="GeneID:121352902"
ORIGIN      
        1 mfgtvvvgvg iaglarirdl mnpmpsspse hlklfgfvsr rsfgnineak qisledalrn
       61 kdihaafist enksheetir mfleagkhvl veypmalsak aahelwemae qkgkvlhveh
      121 iellteeykq lkkevagkdl vkgtlhftgs vldenksgfp afsgiarltw lidlfgdltv
      181 tsatrekqkd kdysrmtvhf qtankkpltw ieergpgmrr ekkinfcfts gclenlpeap
      241 rssvglfmqd qnlfakkllg qvskeelaae kwrilrcldl aeviqqycee pekiys
//
LOCUS       XP_041322195             296 aa            linear   VRT 06-MAY-2021
DEFINITION  biliverdin reductase A [Pyrgilauda ruficollis].
ACCESSION   XP_041322195
VERSION     XP_041322195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="biliverdin reductase A"
                     /calculated_mol_wt=33413
     Region          2..120
                     /region_name="GFO_IDH_MocA"
                     /note="Oxidoreductase family, NAD-binding Rossmann fold;
                     pfam01408"
                     /db_xref="CDD:426248"
     Region          128..240
                     /region_name="Biliv-reduc_cat"
                     /note="Biliverdin reductase, catalytic; pfam09166"
                     /db_xref="CDD:462699"
     CDS             1..296
                     /gene="BLVRA"
                     /coded_by="XM_041466261.1:132..1022"
                     /db_xref="GeneID:121352902"
ORIGIN      
        1 mfgtvvvgvg iaglarirdl mnpmpsspse hlklfgfvsr rsfgnineak qisledalrn
       61 kdihaafist enksheetir mfleagkhvl veypmalsak aahelwemae qkgkvlhveh
      121 iellteeykq lkkevagkdl vkgtlhftgs vldenksgfp afsgiarltw lidlfgdltv
      181 tsatrekqkd kdysrmtvhf qtankkpltw ieergpgmrr ekkinfcfts gclenlpeap
      241 rssvglfmqd qnlfakkllg qvskeelaae kwrilrcldl aeviqqycee pekiys
//
LOCUS       XP_041322196             326 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322196
VERSION     XP_041322196.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466262.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="cyclin-dependent kinase 6"
                     /calculated_mol_wt=36798
     Region          11..300
                     /region_name="STKc_CDK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 6; cd07862"
                     /db_xref="CDD:270846"
     Site            order(14..19,29,31,37,39,102..103,107,111,155)
                     /site_type="other"
                     /note="CDK/INK4 inhibitor interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,60,77,98..101,104,106..107,145,147,
                     149..150,152,163,166,177,179..182,184,221..222)
                     /site_type="active"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,77,98..101,104,149..150,152,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270846"
     Site            order(51..54,56,58..60,62..63,66..67,71,82,84,86,94,
                     138..140,168..177,195,198,292)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(60,106,145,147,166,177,179..182,184,221..222)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270846"
     Site            162..184
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270846"
     CDS             1..326
                     /gene="CDK6"
                     /coded_by="XM_041466262.1:384..1364"
                     /db_xref="GeneID:121352903"
ORIGIN      
        1 mdkdstnlad qqyecvaeig egaygkvfka rdlknggrfv alkrvrvqts eegmplstir
       61 evavlrhlet fehpnvvrlf dvctvsrtdr etkltlvfeh vdqdlttyld kvpepgvpte
      121 tikdmmlqlf rgldflhshr vvhrdlkpqn ilvtsngqik ladfglariy sfqmaltsvv
      181 vtlwyrapev llqssyatav dlwsvgcifa emfrrkplfr gnsdvdqlgk ifdviglpee
      241 edwpndvalp rnaftsrpaq piekfvpdid eigkdlllkc lafnpakris ayvalshpyf
      301 hdleklkenl dchvsssqns sevnas
//
LOCUS       XP_041322197             326 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322197
VERSION     XP_041322197.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466263.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="cyclin-dependent kinase 6"
                     /calculated_mol_wt=36798
     Region          11..300
                     /region_name="STKc_CDK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 6; cd07862"
                     /db_xref="CDD:270846"
     Site            order(14..19,29,31,37,39,102..103,107,111,155)
                     /site_type="other"
                     /note="CDK/INK4 inhibitor interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,60,77,98..101,104,106..107,145,147,
                     149..150,152,163,166,177,179..182,184,221..222)
                     /site_type="active"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,77,98..101,104,149..150,152,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270846"
     Site            order(51..54,56,58..60,62..63,66..67,71,82,84,86,94,
                     138..140,168..177,195,198,292)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(60,106,145,147,166,177,179..182,184,221..222)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270846"
     Site            162..184
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270846"
     CDS             1..326
                     /gene="CDK6"
                     /coded_by="XM_041466263.1:295..1275"
                     /db_xref="GeneID:121352903"
ORIGIN      
        1 mdkdstnlad qqyecvaeig egaygkvfka rdlknggrfv alkrvrvqts eegmplstir
       61 evavlrhlet fehpnvvrlf dvctvsrtdr etkltlvfeh vdqdlttyld kvpepgvpte
      121 tikdmmlqlf rgldflhshr vvhrdlkpqn ilvtsngqik ladfglariy sfqmaltsvv
      181 vtlwyrapev llqssyatav dlwsvgcifa emfrrkplfr gnsdvdqlgk ifdviglpee
      241 edwpndvalp rnaftsrpaq piekfvpdid eigkdlllkc lafnpakris ayvalshpyf
      301 hdleklkenl dchvsssqns sevnas
//
LOCUS       XP_041322198             326 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322198
VERSION     XP_041322198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="cyclin-dependent kinase 6"
                     /calculated_mol_wt=36798
     Region          11..300
                     /region_name="STKc_CDK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 6; cd07862"
                     /db_xref="CDD:270846"
     Site            order(14..19,29,31,37,39,102..103,107,111,155)
                     /site_type="other"
                     /note="CDK/INK4 inhibitor interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,60,77,98..101,104,106..107,145,147,
                     149..150,152,163,166,177,179..182,184,221..222)
                     /site_type="active"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,77,98..101,104,149..150,152,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270846"
     Site            order(51..54,56,58..60,62..63,66..67,71,82,84,86,94,
                     138..140,168..177,195,198,292)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(60,106,145,147,166,177,179..182,184,221..222)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270846"
     Site            162..184
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270846"
     CDS             1..326
                     /gene="CDK6"
                     /coded_by="XM_041466264.1:313..1293"
                     /db_xref="GeneID:121352903"
ORIGIN      
        1 mdkdstnlad qqyecvaeig egaygkvfka rdlknggrfv alkrvrvqts eegmplstir
       61 evavlrhlet fehpnvvrlf dvctvsrtdr etkltlvfeh vdqdlttyld kvpepgvpte
      121 tikdmmlqlf rgldflhshr vvhrdlkpqn ilvtsngqik ladfglariy sfqmaltsvv
      181 vtlwyrapev llqssyatav dlwsvgcifa emfrrkplfr gnsdvdqlgk ifdviglpee
      241 edwpndvalp rnaftsrpaq piekfvpdid eigkdlllkc lafnpakris ayvalshpyf
      301 hdleklkenl dchvsssqns sevnas
//
LOCUS       XP_041322199             326 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322199
VERSION     XP_041322199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466265.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="cyclin-dependent kinase 6"
                     /calculated_mol_wt=36798
     Region          11..300
                     /region_name="STKc_CDK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 6; cd07862"
                     /db_xref="CDD:270846"
     Site            order(14..19,29,31,37,39,102..103,107,111,155)
                     /site_type="other"
                     /note="CDK/INK4 inhibitor interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,60,77,98..101,104,106..107,145,147,
                     149..150,152,163,166,177,179..182,184,221..222)
                     /site_type="active"
                     /db_xref="CDD:270846"
     Site            order(19..24,27,41,43,77,98..101,104,149..150,152,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270846"
     Site            order(51..54,56,58..60,62..63,66..67,71,82,84,86,94,
                     138..140,168..177,195,198,292)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270846"
     Site            order(60,106,145,147,166,177,179..182,184,221..222)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270846"
     Site            162..184
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270846"
     CDS             1..326
                     /gene="CDK6"
                     /coded_by="XM_041466265.1:387..1367"
                     /db_xref="GeneID:121352903"
ORIGIN      
        1 mdkdstnlad qqyecvaeig egaygkvfka rdlknggrfv alkrvrvqts eegmplstir
       61 evavlrhlet fehpnvvrlf dvctvsrtdr etkltlvfeh vdqdlttyld kvpepgvpte
      121 tikdmmlqlf rgldflhshr vvhrdlkpqn ilvtsngqik ladfglariy sfqmaltsvv
      181 vtlwyrapev llqssyatav dlwsvgcifa emfrrkplfr gnsdvdqlgk ifdviglpee
      241 edwpndvalp rnaftsrpaq piekfvpdid eigkdlllkc lafnpakris ayvalshpyf
      301 hdleklkenl dchvsssqns sevnas
//
LOCUS       XP_041322200             317 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidoreductase NAD-binding domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322200
VERSION     XP_041322200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..317
                     /product="oxidoreductase NAD-binding domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=35183
     Region          76..314
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cd00322"
                     /db_xref="CDD:99778"
     Site            order(102,114..117,134..136,140..143,184)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(114,116..117)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(140,143,146,153)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99778"
     Site            order(179,183..186,188)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99778"
     Site            order(184..185,220..222,289..290)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
     CDS             1..317
                     /gene="OXNAD1"
                     /coded_by="XM_041466266.1:143..1096"
                     /db_xref="GeneID:121352904"
ORIGIN      
        1 maratiyvgc tvpqllrgaq srifpshspl gvlrhsafcy ctgngtiksk rkmdhlerta
       61 nnfrqevitq akvcgitnes etvkrlrlai ankdftfkag qwvdffipgv svvggfsics
      121 spglleregi lelavkhtvh ppahwihtec tldsevalrv ggdfffdpqp gdspvnlvli
      181 aggvginplf sillhiadlh gyqegkgnrh klgtaklyys akntsellfk knilglmkaf
      241 pgkitccfhv tqqrsqicke lqphitegri sekdlekhvs ndtswyicgp ppmiesiskl
      301 ltnigvprnr vffekww
//
LOCUS       XP_041322201             317 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidoreductase NAD-binding domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322201
VERSION     XP_041322201.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466267.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..317
                     /product="oxidoreductase NAD-binding domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=35183
     Region          76..314
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cd00322"
                     /db_xref="CDD:99778"
     Site            order(102,114..117,134..136,140..143,184)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(114,116..117)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(140,143,146,153)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99778"
     Site            order(179,183..186,188)
                     /site_type="other"
                     /note="beta-alpha-beta structure motif"
                     /db_xref="CDD:99778"
     Site            order(184..185,220..222,289..290)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
     CDS             1..317
                     /gene="OXNAD1"
                     /coded_by="XM_041466267.1:318..1271"
                     /db_xref="GeneID:121352904"
ORIGIN      
        1 maratiyvgc tvpqllrgaq srifpshspl gvlrhsafcy ctgngtiksk rkmdhlerta
       61 nnfrqevitq akvcgitnes etvkrlrlai ankdftfkag qwvdffipgv svvggfsics
      121 spglleregi lelavkhtvh ppahwihtec tldsevalrv ggdfffdpqp gdspvnlvli
      181 aggvginplf sillhiadlh gyqegkgnrh klgtaklyys akntsellfk knilglmkaf
      241 pgkitccfhv tqqrsqicke lqphitegri sekdlekhvs ndtswyicgp ppmiesiskl
      301 ltnigvprnr vffekww
//
LOCUS       XP_041322202             282 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidoreductase NAD-binding domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322202
VERSION     XP_041322202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466268.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="oxidoreductase NAD-binding domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=31521
     Region          76..279
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cd00322"
                     /db_xref="CDD:99778"
     Site            order(102,114..117,134..136,140..143)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(114,116..117)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(140,143,146,153)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99778"
     CDS             1..282
                     /gene="OXNAD1"
                     /coded_by="XM_041466268.1:33..881"
                     /db_xref="GeneID:121352904"
ORIGIN      
        1 maratiyvgc tvpqllrgaq srifpshspl gvlrhsafcy ctgngtiksk rkmdhlerta
       61 nnfrqevitq akvcgitnes etvkrlrlai ankdftfkag qwvdffipgv svvggfsics
      121 spglleregi lelavkhtvh ppahwihtec tldsevalrv gadlhgyqeg kgnrhklgta
      181 klyysaknts ellfkknilg lmkafpgkit ccfhvtqqrs qickelqphi tegrisekdl
      241 ekhvsndtsw yicgpppmie sisklltnig vprnrvffek ww
//
LOCUS       XP_041322203             281 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidoreductase NAD-binding domain-containing protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322203
VERSION     XP_041322203.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466269.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="oxidoreductase NAD-binding domain-containing
                     protein 1 isoform X3"
                     /calculated_mol_wt=31450
     Region          76..278
                     /region_name="FNR_like"
                     /note="Ferredoxin reductase (FNR), an FAD and NAD(P)
                     binding protein, was intially identified as a chloroplast
                     reductase activity, catalyzing the electron transfer from
                     reduced iron-sulfur protein ferredoxin to NADP+ as the
                     final step in the electron transport...; cd00322"
                     /db_xref="CDD:99778"
     Site            order(102,114..117,134..136,140..143)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(114,116..117)
                     /site_type="other"
                     /note="conserved FAD binding motif [chemical binding]"
                     /db_xref="CDD:99778"
     Site            order(140,143,146,153)
                     /site_type="other"
                     /note="phosphate binding motif [ion binding]"
                     /db_xref="CDD:99778"
     CDS             1..281
                     /gene="OXNAD1"
                     /coded_by="XM_041466269.1:33..878"
                     /db_xref="GeneID:121352904"
ORIGIN      
        1 maratiyvgc tvpqllrgaq srifpshspl gvlrhsafcy ctgngtiksk rkmdhlerta
       61 nnfrqevitq akvcgitnes etvkrlrlai ankdftfkag qwvdffipgv svvggfsics
      121 spglleregi lelavkhtvh ppahwihtec tldsevalrv gdlhgyqegk gnrhklgtak
      181 lyysakntse llfkknilgl mkafpgkitc cfhvtqqrsq ickelqphit egrisekdle
      241 khvsndtswy icgpppmies isklltnigv prnrvffekw w
//
LOCUS       XP_041322205              82 aa            linear   VRT 06-MAY-2021
DEFINITION  DPH3 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322205
VERSION     XP_041322205.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466271.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..82
                     /product="DPH3 homolog"
                     /calculated_mol_wt=9369
     Region          6..60
                     /region_name="zf-CSL"
                     /note="CSL zinc finger; pfam05207"
                     /db_xref="CDD:398744"
     CDS             1..82
                     /gene="DPH3"
                     /coded_by="XM_041466271.1:29..277"
                     /db_xref="GeneID:121352905"
ORIGIN      
        1 mavfhdevei edfeydeetg tysypcpcgd rflitredle ngedvatcps cslilrviyd
       61 qeqfmrdevv aeplpnkelv kc
//
LOCUS       XP_041322206              82 aa            linear   VRT 06-MAY-2021
DEFINITION  DPH3 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322206
VERSION     XP_041322206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466272.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..82
                     /product="DPH3 homolog"
                     /calculated_mol_wt=9369
     Region          6..60
                     /region_name="zf-CSL"
                     /note="CSL zinc finger; pfam05207"
                     /db_xref="CDD:398744"
     CDS             1..82
                     /gene="DPH3"
                     /coded_by="XM_041466272.1:29..277"
                     /db_xref="GeneID:121352905"
ORIGIN      
        1 mavfhdevei edfeydeetg tysypcpcgd rflitredle ngedvatcps cslilrviyd
       61 qeqfmrdevv aeplpnkelv kc
//
LOCUS       XP_041322207             433 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding motif, single-stranded-interacting protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322207
VERSION     XP_041322207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466273.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..433
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 3 isoform X1"
                     /calculated_mol_wt=47434
     Region          56..135
                     /region_name="RRM1_RBMS3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12472"
                     /db_xref="CDD:409902"
     Region          <60..401
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          138..225
                     /region_name="RRM2_RBMS3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12475"
                     /db_xref="CDD:240919"
     CDS             1..433
                     /gene="RBMS3"
                     /coded_by="XM_041466273.1:603..1904"
                     /db_xref="GeneID:121352906"
ORIGIN      
        1 mgkrldqqpm ypqytyyyph ylqtkqsyap aphpmappsp stnssnnssn nssgeqlskt
       61 nlyirglppg ttdqdliklc qpygkivstk aildkntnqc kgygfvdfds paaaqkavas
      121 lkangvqaqm akqqeqdptn lyisnlpvsm deqelenmlk pfghvistri lrdangvsrg
      181 vgfarmeste kcevviqhfn gkylktppgl paptepllck fadggqkkrq nqskytqngr
      241 pwpregeagm altydptaai qngfysspys iptnrmipqt sitpfiaasp vstyqvqsts
      301 wmphppyvmq ptgavitptm dhtmsmqpas mmgpltqqmn hlslgttgty mtaaapmqgt
      361 yipqytpvpp tavpiegvva daspqtvass sqeasgqqqq mtvetsseha paysyqqskq
      421 rrrenvlrmn wvv
//
LOCUS       XP_041322208             432 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding motif, single-stranded-interacting protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322208
VERSION     XP_041322208.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466274.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 3 isoform X2"
                     /calculated_mol_wt=47306
     Region          55..134
                     /region_name="RRM1_RBMS3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12472"
                     /db_xref="CDD:409902"
     Region          <59..400
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          137..224
                     /region_name="RRM2_RBMS3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12475"
                     /db_xref="CDD:240919"
     CDS             1..432
                     /gene="RBMS3"
                     /coded_by="XM_041466274.1:605..1903"
                     /db_xref="GeneID:121352906"
ORIGIN      
        1 mgkrldqqpm ypqytyyyph ylqtksyapa phpmappsps tnssnnssnn ssgeqlsktn
       61 lyirglppgt tdqdliklcq pygkivstka ildkntnqck gygfvdfdsp aaaqkavasl
      121 kangvqaqma kqqeqdptnl yisnlpvsmd eqelenmlkp fghvistril rdangvsrgv
      181 gfarmestek cevviqhfng kylktppglp aptepllckf adggqkkrqn qskytqngrp
      241 wpregeagma ltydptaaiq ngfysspysi ptnrmipqts itpfiaaspv styqvqstsw
      301 mphppyvmqp tgavitptmd htmsmqpasm mgpltqqmnh lslgttgtym taaapmqgty
      361 ipqytpvppt avpiegvvad aspqtvasss qeasgqqqqm tvetssehap aysyqqskqr
      421 rrenvlrmnw vv
//
LOCUS       XP_041322210             420 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding motif, single-stranded-interacting protein 3 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322210
VERSION     XP_041322210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 3 isoform X3"
                     /calculated_mol_wt=45724
     Region          56..135
                     /region_name="RRM1_RBMS3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12472"
                     /db_xref="CDD:409902"
     Region          <60..401
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          138..225
                     /region_name="RRM2_RBMS3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12475"
                     /db_xref="CDD:240919"
     CDS             1..420
                     /gene="RBMS3"
                     /coded_by="XM_041466276.1:600..1862"
                     /db_xref="GeneID:121352906"
ORIGIN      
        1 mgkrldqqpm ypqytyyyph ylqtkqsyap aphpmappsp stnssnnssn nssgeqlskt
       61 nlyirglppg ttdqdliklc qpygkivstk aildkntnqc kgygfvdfds paaaqkavas
      121 lkangvqaqm akqqeqdptn lyisnlpvsm deqelenmlk pfghvistri lrdangvsrg
      181 vgfarmeste kcevviqhfn gkylktppgl paptepllck fadggqkkrq nqskytqngr
      241 pwpregeagm altydptaai qngfysspys iptnrmipqt sitpfiaasp vstyqvqsts
      301 wmphppyvmq ptgavitptm dhtmsmqpas mmgpltqqmn hlslgttgty mtaaapmqgt
      361 yipqytpvpp tavpiegvva daspqtvass sqeasgqqqq mtvetsseha paysyqqskq
//
LOCUS       XP_041322211             419 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding motif, single-stranded-interacting protein 3 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322211
VERSION     XP_041322211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466277.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 3 isoform X4"
                     /calculated_mol_wt=45596
     Region          56..135
                     /region_name="RRM1_RBMS3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12472"
                     /db_xref="CDD:409902"
     Region          <60..401
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          138..225
                     /region_name="RRM2_RBMS3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12475"
                     /db_xref="CDD:240919"
     CDS             1..419
                     /gene="RBMS3"
                     /coded_by="XM_041466277.1:602..1861"
                     /db_xref="GeneID:121352906"
ORIGIN      
        1 mgkrldqqpm ypqytyyyph ylqtkqsyap aphpmappsp stnssnnssn nssgeqlskt
       61 nlyirglppg ttdqdliklc qpygkivstk aildkntnqc kgygfvdfds paaaqkavas
      121 lkangvqaqm akqqeqdptn lyisnlpvsm deqelenmlk pfghvistri lrdangvsrg
      181 vgfarmeste kcevviqhfn gkylktppgl paptepllck fadggqkkrq nqskytqngr
      241 pwpregeagm altydptaai qngfysspys iptnrmipqt sitpfiaasp vstyqvqsts
      301 wmphppyvmq ptgavitptm dhtmsmqpas mmgpltqqmn hlslgttgty mtaaapmqgt
      361 yipqytpvpp tavpiegvva daspqtvass sqeasgqqqq mtvetsseha paysyqqsk
//
LOCUS       XP_041322212             379 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding motif, single-stranded-interacting protein 3 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322212
VERSION     XP_041322212.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466278.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..379
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 3 isoform X5"
                     /calculated_mol_wt=41472
     Region          56..135
                     /region_name="RRM1_RBMS3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12472"
                     /db_xref="CDD:409902"
     Region          138..225
                     /region_name="RRM2_RBMS3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12475"
                     /db_xref="CDD:240919"
     CDS             1..379
                     /gene="RBMS3"
                     /coded_by="XM_041466278.1:602..1741"
                     /db_xref="GeneID:121352906"
ORIGIN      
        1 mgkrldqqpm ypqytyyyph ylqtkqsyap aphpmappsp stnssnnssn nssgeqlskt
       61 nlyirglppg ttdqdliklc qpygkivstk aildkntnqc kgygfvdfds paaaqkavas
      121 lkangvqaqm akqqeqdptn lyisnlpvsm deqelenmlk pfghvistri lrdangvsrg
      181 vgfarmeste kcevviqhfn gkylktppgl paptepllck fadggqkkrq nqskytqngr
      241 pwpregeagm altydptaai qngfysspys iptnrmipqt sitpfiaasp vstyqvqsts
      301 wmphppyvmq ptgavitptm dhtmsmqpas mmgpltqqmn hlslgttgty mtaaapmqgt
      361 yipqytpvpp tavpiedte
//
LOCUS       XP_041322213             418 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding motif, single-stranded-interacting protein 3 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322213
VERSION     XP_041322213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 3 isoform X6"
                     /calculated_mol_wt=45467
     Region          55..134
                     /region_name="RRM1_RBMS3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12472"
                     /db_xref="CDD:409902"
     Region          <59..400
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          137..224
                     /region_name="RRM2_RBMS3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     RNA-binding motif, single-stranded-interacting protein 3
                     (RBMS3); cd12475"
                     /db_xref="CDD:240919"
     CDS             1..418
                     /gene="RBMS3"
                     /coded_by="XM_041466279.1:604..1860"
                     /db_xref="GeneID:121352906"
ORIGIN      
        1 mgkrldqqpm ypqytyyyph ylqtksyapa phpmappsps tnssnnssnn ssgeqlsktn
       61 lyirglppgt tdqdliklcq pygkivstka ildkntnqck gygfvdfdsp aaaqkavasl
      121 kangvqaqma kqqeqdptnl yisnlpvsmd eqelenmlkp fghvistril rdangvsrgv
      181 gfarmestek cevviqhfng kylktppglp aptepllckf adggqkkrqn qskytqngrp
      241 wpregeagma ltydptaaiq ngfysspysi ptnrmipqts itpfiaaspv styqvqstsw
      301 mphppyvmqp tgavitptmd htmsmqpasm mgpltqqmnh lslgttgtym taaapmqgty
      361 ipqytpvppt avpiegvvad aspqtvasss qeasgqqqqm tvetssehap aysyqqsk
//
LOCUS       XP_041322215            1361 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphoinositide 3-kinase regulatory subunit 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322215
VERSION     XP_041322215.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466281.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1361
                     /product="phosphoinositide 3-kinase regulatory subunit 4"
                     /calculated_mol_wt=152976
     Region          25..319
                     /region_name="STKc_Vps15"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Vacuolar protein sorting-associated protein 15; cd13980"
                     /db_xref="CDD:270882"
     Site            order(32..36,40,51,53,85,101..104,107,109,146,148,
                     150..151,153,164,167,190..193)
                     /site_type="active"
                     /db_xref="CDD:270882"
     Site            order(32..36,40,51,53,85,101..104,107,146,148,150..151,
                     153,164)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270882"
     Site            order(36,107,109,146,148,150,167,190..193)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270882"
     Site            order(163..185,190..193)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270882"
     Region          378..403
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          417..445
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          461..491
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          538..565
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          575..606
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          613..640
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          <982..1360
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          1000..1043
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1048..1084
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1100..1139
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1147..1183
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1190..1239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1245..1271
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1335..1360
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1361
                     /gene="PIK3R4"
                     /coded_by="XM_041466281.1:192..4277"
                     /db_xref="GeneID:121352907"
ORIGIN      
        1 mgnqlagiap sqilsvdsyf sdihdfeydk slgstrffkv arakhreglv vvkvfaiqdp
       61 tlpltsykqe leelkirlhs aqnclpfqka tlsekaamlf rqyvrdnlyd ristrpflnn
      121 iekrwiafqi ltavdqahks gvrhgdikte nimvtswnwv lltdfasfkp tylpednpad
      181 fnyffdtsrr rtcyiaperf vdgsmfatel enmrdpstpl vdlansnqrt rgelkramdi
      241 fsagcviael ftegvplfdl sqllayrngl fspdqvlnki edrsirelvt qmihrepdkr
      301 laaedylkqq rnnafpeify tflqpymaqf aketfvsade rilvirkdld niihnlcghd
      361 rtekaegetk englvilvsv itsclqtlky cdsklaalel ilhlaprlsv eilldritpy
      421 llhfsndsvp rvraesvrtl tkvlalvkev prndiniype yilpgiahla qdeativrla
      481 yaeniallae talrflelvq lknlnmenep ngeemdetsh psdnydtelq alhemvqqkv
      541 vtllsdpeni vkqtlmengi trlcvffgrq kandvllshm itflndkndw hlrgaffdsi
      601 vgvaayvgwq sssilkpllq qglsdaeefv iykalnaltc mcqlgllqkp hiyefacdia
      661 pflchpnlwi cygavgfitv vaqylniadv ycklmpylhp fitqpiiqvd keivllsvlk
      721 epvsrsifdy vlrskditsl frhlhlrqmk rtgalsecpp pedpaiaqll kkllsqgmte
      781 eeedkllalk dfmlksnkak anivdqshlh dsshkgvidl salgitgrqv dlvktkqdsd
      841 dkrarkhvkq dsnvneewks mfgsleptni sqpiskghgq ttdpeaiqag kplrsessag
      901 icatlssspq asdgavvqpr kptlqalsst mspsahqlri ttcktelqql iqqkreqcna
      961 erlakqmmen aeweskpppp gwrpkgllva hlhehksavn rirvsdehsi fatcsndgtv
     1021 kvwnsqkmeg kttttrsilt ysrigghvkt ltfcqgshyl aiasdngaiq llgieasklp
     1081 kspkihpiqs rsldlkddgc vvdihhfnsg aqsvlaygtv ngslvgwdlr sssnawtlkh
     1141 dlklglitsf avdihqcwlc igtsngtmac wdmrfqlpis shshpskari rrllmhpvyq
     1201 swviaavqgn nevsmwdmet gdrrftlwas sapplselqp sphsihgiyc spasgnpill
     1261 tagsdmkirf wdlaypersy vvagssncps vsyyrkiieg tevvqeiqnk qkmgptdetp
     1321 rkgpeslpvg hhdiitdiat fqttqgfivt asrdgivkvw k
//
LOCUS       XP_041322216             894 aa            linear   VRT 06-MAY-2021
DEFINITION  dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit STT3B [Pyrgilauda ruficollis].
ACCESSION   XP_041322216
VERSION     XP_041322216.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466282.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..894
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit STT3B"
                     /calculated_mol_wt=100546
     Region          139..631
                     /region_name="STT3"
                     /note="Oligosaccharyl transferase STT3 subunit; pfam02516"
                     /db_xref="CDD:396873"
     CDS             1..894
                     /gene="STT3B"
                     /coded_by="XM_041466282.1:39..2723"
                     /db_xref="GeneID:121352908"
ORIGIN      
        1 mapppglara apcsppprgt vtaaaggggs grarvrqeaa gsqrgapskn grapprplps
       61 ppppalppss psllrlllpa ragrrerlrg spgynmaehs apdhkhrpaa nsaaplhsra
      121 gaggglsggl sqpagwqsll sftilflawl agfssrlfav irfesiihef dpwfnyrsth
      181 hlashgfyef lnwfderawy plgrivggtv ypglmvtagl ihwilnmlnv tvhirdvcvf
      241 lapvfsglta istflltrel wnqgagllaa cfiaivpgyi srsvagsfdn egiaifalqf
      301 tyylwvksvk tgsvfwticc clsyfymvsa wggyvfiinl iplhvfvlll mqrysrrvyi
      361 aystfyivgl ilsmqipfvg fqpirtsehm aaagvfallq ayaflqylrd rltkqefqtl
      421 fflgvslaag tvflsviylt ytgyiapwsg rfyslwdtgy akihipiias vsehqpttwv
      481 sfffdlhilv ctfpaglwfc iknindervf valyaisavy fagvmvrlml tltpvvcmls
      541 aiafsnvfer ylgddmkren ppiedssded dkrnpgnlyd kagkvrkhvs eqekteeglg
      601 pniknivtml mlmllmmfav hctwvtsnay sspsvvlasy nhdgtrnild dfreayywlr
      661 qntdeharvm swwdygyqia gmanrttlvd nntwnnshia lvgkamssne saayeimrsl
      721 dvdyvliifg gvigysgddi nkflwmvria egehpkdire sdyftpqgef rvdkagsptl
      781 lnclmykmsy yrfgemqldf rtppgfdrtr naeignkdik fkhleeafts ehwlvriykv
      841 kqldnretld hkprvtnivp kqkylskkts krkrgyiknk lilkkgkrpn rktv
//
LOCUS       XP_041322217            1121 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive phospholipase C-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322217
VERSION     XP_041322217.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466283.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1121
                     /product="inactive phospholipase C-like protein 2"
                     /calculated_mol_wt=125309
     Region          137..245
                     /region_name="PH_PLC_eta"
                     /note="Phospholipase C-eta (PLC-eta) pleckstrin homology
                     (PH) domain; cd13364"
                     /db_xref="CDD:270170"
     Site            order(142,144,154,171,228)
                     /site_type="other"
                     /note="putative Rac1 binding site [polypeptide binding]"
                     /db_xref="CDD:270170"
     Site            order(145,147,151,153,155,170..171)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270170"
     Region          265..408
                     /region_name="EFh_PI-PLC"
                     /note="EF-hand motif found in eukaryotic
                     phosphoinositide-specific phospholipase C (PI-PLC, EC
                     3.1.4.11) isozymes; cl28895"
                     /db_xref="CDD:333715"
     Region          265..294
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          301..332
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          337..365
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          374..407
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          419..715
                     /region_name="PI-PLCc_PRIP_metazoa"
                     /note="Catalytic domain of metazoan phospholipase C
                     related, but catalytically inactive protein; cd08597"
                     /db_xref="CDD:176539"
     Region          747..875
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(774,798,827,829,834,836)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     CDS             1..1121
                     /gene="PLCL2"
                     /coded_by="XM_041466283.1:740..4105"
                     /db_xref="GeneID:121352910"
ORIGIN      
        1 maefgsgggt gggglpsspg pvqgkvafka gdgegggggg grsrfdsags rvsngdcaqp
       61 gageepgsap paspessske rgystsqqre gkpgiprrss iikdgtkqkr erkktvsfss
      121 mptekkissa sdcinamveg selkkvrsns rvyhryflld admqslrwep skkdsekaki
      181 diksikevrt gkntdifrsn giydqisedc afsiiygeny esldlvansa dvaniwvtgl
      241 rylisygkht ldmlgttqdn mrtswlsqif sesdvdnlgh iplcnavqfi kdlnpglktn
      301 kielkfkelh rsrekagtev tkeefievfh elctrpeiyf llvqfssnke fldtkdlmmf
      361 leaeqgmaqv teeisleiiq kyepakegqe kgclsidgft nyltspdchi fdpehkkvcq
      421 dmkqplshyf insshntyli edqfrgpsdi tgyiralkmg crsveldvwd gpdnepviyt
      481 ghtmtsqivf rsvidiinky affaseypli lclenhcsik qqkvmvqhmk kilgdklhtq
      541 spnieesylp speslkgkil ikakklsanc sglegdvtde degaemsqrv akegveqqns
      601 mtgkrfqlck dlselvsick svqfkefqvs fqlqkywevc sfnevlasky anenpgdfvn
      661 ynkrflarvf pspmridssn mnpqdfwkcg cqivamnfqt pglmmdlnig wfrqngncgy
      721 vlrpaimree vsffsantkd tvpgvspqll hikiisgqnf pkpkgsgakg dvvdpyvyve
      781 ihgipadcae qrtktmhqng dnpifdesfe fqinlpelam vrfvvldddy igdefigqyt
      841 ipfeclqtgy rhvplqsltg eslahaslfv hvaitnrrgg gkphkrglsv rkgkksreya
      901 smrtlwiktv devfknalqp irdatdlren mqnavvsfke lcglspvanl mqcilavsmh
      961 lvgpdntplv vvnlsdqypt melqgivpev lkkivtayem mihtirtlve ntdslyekiv
     1021 qcqkaamefh enlhnigare glkerklqks vesftwniti lkgqadllky aknealenlk
     1081 qihyatlscg lnkpgtente iskprrslev ipekagdeng e
//
LOCUS       XP_041322218            1121 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive phospholipase C-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322218
VERSION     XP_041322218.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466284.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1121
                     /product="inactive phospholipase C-like protein 2"
                     /calculated_mol_wt=125309
     Region          137..245
                     /region_name="PH_PLC_eta"
                     /note="Phospholipase C-eta (PLC-eta) pleckstrin homology
                     (PH) domain; cd13364"
                     /db_xref="CDD:270170"
     Site            order(142,144,154,171,228)
                     /site_type="other"
                     /note="putative Rac1 binding site [polypeptide binding]"
                     /db_xref="CDD:270170"
     Site            order(145,147,151,153,155,170..171)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270170"
     Region          265..408
                     /region_name="EFh_PI-PLC"
                     /note="EF-hand motif found in eukaryotic
                     phosphoinositide-specific phospholipase C (PI-PLC, EC
                     3.1.4.11) isozymes; cl28895"
                     /db_xref="CDD:333715"
     Region          265..294
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          301..332
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          337..365
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          374..407
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          419..715
                     /region_name="PI-PLCc_PRIP_metazoa"
                     /note="Catalytic domain of metazoan phospholipase C
                     related, but catalytically inactive protein; cd08597"
                     /db_xref="CDD:176539"
     Region          747..875
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(774,798,827,829,834,836)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     CDS             1..1121
                     /gene="PLCL2"
                     /coded_by="XM_041466284.1:298..3663"
                     /db_xref="GeneID:121352910"
ORIGIN      
        1 maefgsgggt gggglpsspg pvqgkvafka gdgegggggg grsrfdsags rvsngdcaqp
       61 gageepgsap paspessske rgystsqqre gkpgiprrss iikdgtkqkr erkktvsfss
      121 mptekkissa sdcinamveg selkkvrsns rvyhryflld admqslrwep skkdsekaki
      181 diksikevrt gkntdifrsn giydqisedc afsiiygeny esldlvansa dvaniwvtgl
      241 rylisygkht ldmlgttqdn mrtswlsqif sesdvdnlgh iplcnavqfi kdlnpglktn
      301 kielkfkelh rsrekagtev tkeefievfh elctrpeiyf llvqfssnke fldtkdlmmf
      361 leaeqgmaqv teeisleiiq kyepakegqe kgclsidgft nyltspdchi fdpehkkvcq
      421 dmkqplshyf insshntyli edqfrgpsdi tgyiralkmg crsveldvwd gpdnepviyt
      481 ghtmtsqivf rsvidiinky affaseypli lclenhcsik qqkvmvqhmk kilgdklhtq
      541 spnieesylp speslkgkil ikakklsanc sglegdvtde degaemsqrv akegveqqns
      601 mtgkrfqlck dlselvsick svqfkefqvs fqlqkywevc sfnevlasky anenpgdfvn
      661 ynkrflarvf pspmridssn mnpqdfwkcg cqivamnfqt pglmmdlnig wfrqngncgy
      721 vlrpaimree vsffsantkd tvpgvspqll hikiisgqnf pkpkgsgakg dvvdpyvyve
      781 ihgipadcae qrtktmhqng dnpifdesfe fqinlpelam vrfvvldddy igdefigqyt
      841 ipfeclqtgy rhvplqsltg eslahaslfv hvaitnrrgg gkphkrglsv rkgkksreya
      901 smrtlwiktv devfknalqp irdatdlren mqnavvsfke lcglspvanl mqcilavsmh
      961 lvgpdntplv vvnlsdqypt melqgivpev lkkivtayem mihtirtlve ntdslyekiv
     1021 qcqkaamefh enlhnigare glkerklqks vesftwniti lkgqadllky aknealenlk
     1081 qihyatlscg lnkpgtente iskprrslev ipekagdeng e
//
LOCUS       XP_041322219             404 aa            linear   VRT 06-MAY-2021
DEFINITION  homocysteine-responsive endoplasmic reticulum-resident
            ubiquitin-like domain member 2 protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322219
VERSION     XP_041322219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466285.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="homocysteine-responsive endoplasmic
                     reticulum-resident ubiquitin-like domain member 2 protein
                     isoform X1"
                     /calculated_mol_wt=44540
     Region          9..85
                     /region_name="Ubl_HERP2"
                     /note="ubiquitin-like (Ubl) domain found in
                     homocysteine-inducible endoplasmic reticulum stress
                     protein HERP2 and similar proteins; cd17119"
                     /db_xref="CDD:340639"
     CDS             1..404
                     /gene="HERPUD2"
                     /coded_by="XM_041466285.1:291..1505"
                     /db_xref="GeneID:121352911"
ORIGIN      
        1 mdqsvvehpv tliikapnqk ytdqtiscfl ewtvgklksh lskvypskps tkdqrlvysg
       61 rllpdhlqlk dvlrkqdeyh mvhlvctsrt ppsspkpsts reghgastss sssnlessgs
      121 aaasptnqea stslntsadg vrhrnlpqah snpmpshqfp ylmqgnignq fpgqgapagf
      181 smypafsplq miwwqqmyvr qyymqyqaav saqvtsstep arsavaqaan sehapanepa
      241 avpnvaqenr pvnqnvqmna qggpvvneed fnrdwldwmy tfsraaills ivyfyssfsr
      301 fvmvmgamll vylhqagwfp frqeggqqqa annaevnrdg qhannpdlee merlmddgid
      361 edngedaged gnaeqqpgfm asawsfittf ftslipegpp qvgn
//
LOCUS       XP_041322221             395 aa            linear   VRT 06-MAY-2021
DEFINITION  homocysteine-responsive endoplasmic reticulum-resident
            ubiquitin-like domain member 2 protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322221
VERSION     XP_041322221.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466287.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="homocysteine-responsive endoplasmic
                     reticulum-resident ubiquitin-like domain member 2 protein
                     isoform X2"
                     /calculated_mol_wt=43412
     Region          9..85
                     /region_name="Ubl_HERP2"
                     /note="ubiquitin-like (Ubl) domain found in
                     homocysteine-inducible endoplasmic reticulum stress
                     protein HERP2 and similar proteins; cd17119"
                     /db_xref="CDD:340639"
     CDS             1..395
                     /gene="HERPUD2"
                     /coded_by="XM_041466287.1:291..1478"
                     /db_xref="GeneID:121352911"
ORIGIN      
        1 mdqsvvehpv tliikapnqk ytdqtiscfl ewtvgklksh lskvypskps tkdqrlvysg
       61 rllpdhlqlk dvlrkqdeyh mvhlvctsrt ppsspkpsts reghgastss sssnlessgs
      121 aaasptnqea stslntsadg vrhrnlpqah snpmpshqfp ylmqgnignq fpgqgapagf
      181 smypafsplq miwwqqmyvr qyymqyqaav saqvtsstep arsavaqaan sehapanepa
      241 avpnvaqenr pvnqnvqmna qggpvvneed fnrdwldwmy tfsraaills ivyfyssfsr
      301 fvmvmgamll vylqeggqqq aannaevnrd gqhannpdle emerlmddgi dedngedage
      361 dgnaeqqpgf masawsfitt fftslipegp pqvgn
//
LOCUS       XP_041322222             378 aa            linear   VRT 06-MAY-2021
DEFINITION  homocysteine-responsive endoplasmic reticulum-resident
            ubiquitin-like domain member 2 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322222
VERSION     XP_041322222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="homocysteine-responsive endoplasmic
                     reticulum-resident ubiquitin-like domain member 2 protein
                     isoform X3"
                     /calculated_mol_wt=41478
     Region          9..59
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..378
                     /gene="HERPUD2"
                     /coded_by="XM_041466288.1:291..1427"
                     /db_xref="GeneID:121352911"
ORIGIN      
        1 mdqsvvehpv tliikapnqk ytdqtiscfl ewtvgklksh lskvypskpq deyhmvhlvc
       61 tsrtppsspk pstsreghga stsssssnle ssgsaaaspt nqeastslnt sadgvrhrnl
      121 pqahsnpmps hqfpylmqgn ignqfpgqga pagfsmypaf splqmiwwqq myvrqyymqy
      181 qaavsaqvts steparsava qaansehapa nepaavpnva qenrpvnqnv qmnaqggpvv
      241 needfnrdwl dwmytfsraa illsivyfys sfsrfvmvmg amllvylhqa gwfpfrqegg
      301 qqqaannaev nrdgqhannp dleemerlmd dgidednged agedgnaeqq pgfmasawsf
      361 ittfftslip egppqvgn
//
LOCUS       XP_041322223             340 aa            linear   VRT 06-MAY-2021
DEFINITION  homocysteine-responsive endoplasmic reticulum-resident
            ubiquitin-like domain member 2 protein isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322223
VERSION     XP_041322223.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466289.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="homocysteine-responsive endoplasmic
                     reticulum-resident ubiquitin-like domain member 2 protein
                     isoform X4"
                     /calculated_mol_wt=37480
     Region          9..>49
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     CDS             1..340
                     /gene="HERPUD2"
                     /coded_by="XM_041466289.1:291..1313"
                     /db_xref="GeneID:121352911"
ORIGIN      
        1 mdqsvvehpv tliikapnqk ytdqtiscfl ewtvgklksh lskvypskpn lessgsaaas
       61 ptnqeastsl ntsadgvrhr nlpqahsnpm pshqfpylmq gnignqfpgq gapagfsmyp
      121 afsplqmiww qqmyvrqyym qyqaavsaqv tssteparsa vaqaanseha panepaavpn
      181 vaqenrpvnq nvqmnaqggp vvneedfnrd wldwmytfsr aaillsivyf yssfsrfvmv
      241 mgamllvylh qagwfpfrqe ggqqqaanna evnrdgqhan npdleemerl mddgidedng
      301 edagedgnae qqpgfmasaw sfittfftsl ipegppqvgn
//
LOCUS       XP_041322224             570 aa            linear   VRT 06-MAY-2021
DEFINITION  2-hydroxyacyl-CoA lyase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322224
VERSION     XP_041322224.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466290.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..570
                     /product="2-hydroxyacyl-CoA lyase 1 isoform X1"
                     /calculated_mol_wt=62076
     Region          1..553
                     /region_name="PRK09259"
                     /note="putative oxalyl-CoA decarboxylase; Validated"
                     /db_xref="CDD:236433"
     CDS             1..570
                     /gene="HACL1"
                     /coded_by="XM_041466290.1:72..1784"
                     /db_xref="GeneID:121352912"
ORIGIN      
        1 megeavsgaq iiaqalraqn ieymfgivgi pvteiaiaaq avgikyvgmr neqaacyaas
       61 avgyltgrpg vclvvsgpgf lhalggmana tincwplivi ggssdrnqet mgafqefpqv
      121 eagrlynkls vrpsslevip aviekavrts mygrpgscyi dipgdfvnlq vnkssvkyme
      181 cclpppisma ehsavskaas vialskqpll iigkgaaysh aennirklvd lcglpflptp
      241 makgvvpdnh pncvaaarst alqhadviil lgarlnwilh fglppryrqd vkviqidica
      301 eelgnnvrps atllghinav teqllvefnk rswkypsnse wwqklrgkik nneerskgla
      361 lqkslpmnyy tvfhhireli pkdcilvseg antmdigrtm lpnlyprqrl dagtfgtmgv
      421 glgfaiaaam vardrtpgrr vvciegdsaf gfsgmeleti crynlpilii vvnnngiytg
      481 fdansweeml kfgdpatcvp pvsllpnahy ekimsafggk gyfvktpeel qnalkasvtd
      541 kqtpslinvm idpqserkkq efpwltrsnl
//
LOCUS       XP_041322225             554 aa            linear   VRT 06-MAY-2021
DEFINITION  2-hydroxyacyl-CoA lyase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322225
VERSION     XP_041322225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="2-hydroxyacyl-CoA lyase 1 isoform X2"
                     /calculated_mol_wt=60497
     Region          4..537
                     /region_name="PRK09259"
                     /note="putative oxalyl-CoA decarboxylase; Validated"
                     /db_xref="CDD:236433"
     CDS             1..554
                     /gene="HACL1"
                     /coded_by="XM_041466291.1:129..1793"
                     /db_xref="GeneID:121352912"
ORIGIN      
        1 msqnieymfg ivgipvteia iaaqavgiky vgmrneqaac yaasavgylt grpgvclvvs
       61 gpgflhalgg manatincwp liviggssdr nqetmgafqe fpqveagrly nklsvrpssl
      121 evipavieka vrtsmygrpg scyidipgdf vnlqvnkssv kymecclppp ismaehsavs
      181 kaasvialsk qplliigkga ayshaennir klvdlcglpf lptpmakgvv pdnhpncvaa
      241 arstalqhad viillgarln wilhfglppr yrqdvkviqi dicaeelgnn vrpsatllgh
      301 inavteqllv efnkrswkyp snsewwqklr gkiknneers kglalqkslp mnyytvfhhi
      361 relipkdcil vsegantmdi grtmlpnlyp rqrldagtfg tmgvglgfai aaamvardrt
      421 pgrrvvcieg dsafgfsgme leticrynlp iliivvnnng iytgfdansw eemlkfgdpa
      481 tcvppvsllp nahyekimsa fggkgyfvkt peelqnalka svtdkqtpsl invmidpqse
      541 rkkqefpwlt rsnl
//
LOCUS       XP_041322226             520 aa            linear   VRT 06-MAY-2021
DEFINITION  biotinidase [Pyrgilauda ruficollis].
ACCESSION   XP_041322226
VERSION     XP_041322226.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466292.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="biotinidase"
                     /calculated_mol_wt=58696
     Region          32..327
                     /region_name="biotinidase_like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     cd07567"
                     /db_xref="CDD:143591"
     Site            order(86,186,190,192,219..220,222..223,245)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     Site            order(86,186,219)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     Site            order(187..191,198..200,220,222..226,229..230,251..252,
                     254..256,258..259,283..284)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143591"
     Region          371..520
                     /region_name="Vanin_C"
                     /note="Vanin C-terminal domain; pfam19018"
                     /db_xref="CDD:465946"
     CDS             1..520
                     /gene="BTD"
                     /coded_by="XM_041466292.1:217..1779"
                     /db_xref="GeneID:121352913"
ORIGIN      
        1 maftmvalcw klsicflfyq vvsgrvrreg hyvaavyehe silsptpaal verrsalelm
       61 grnldiyeqq alaaarqgaq iivfpedgih gfnftrssiy pyldfvphsh sgkwnpcrep
      121 ylyndtevvq rlscmalknk iflvanlgtk qpcerseprc ppdgryqfnt nvafaadgal
      181 latyrkhnly fenafdtpae pdyaffdtpf agkfgmftcf dilffepavs lirqynlkqi
      241 vyptawmnql pllsavefqq afstafnvni laanihhptl gmtgsgiytp vksfiyhnme
      301 syggklivae ipvitadykt nlesnerfre nlhdscrtft stslddevcf keqetsgrvs
      361 ekgkeqspps fyaemmydnf tfvplwgekg elqvcanslc cylnyrraal sdelyalgvf
      421 dglhtvhgty yvqacalvkc gglsfstcgq evtdatalid fqlwgnmstp yifpllltsg
      481 itldfadhmg wknnhyflsk nrtsagllta alygrwyekd
//
LOCUS       XP_041322227             520 aa            linear   VRT 06-MAY-2021
DEFINITION  biotinidase [Pyrgilauda ruficollis].
ACCESSION   XP_041322227
VERSION     XP_041322227.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466293.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="biotinidase"
                     /calculated_mol_wt=58696
     Region          32..327
                     /region_name="biotinidase_like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     cd07567"
                     /db_xref="CDD:143591"
     Site            order(86,186,190,192,219..220,222..223,245)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     Site            order(86,186,219)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     Site            order(187..191,198..200,220,222..226,229..230,251..252,
                     254..256,258..259,283..284)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143591"
     Region          371..520
                     /region_name="Vanin_C"
                     /note="Vanin C-terminal domain; pfam19018"
                     /db_xref="CDD:465946"
     CDS             1..520
                     /gene="BTD"
                     /coded_by="XM_041466293.1:286..1848"
                     /db_xref="GeneID:121352913"
ORIGIN      
        1 maftmvalcw klsicflfyq vvsgrvrreg hyvaavyehe silsptpaal verrsalelm
       61 grnldiyeqq alaaarqgaq iivfpedgih gfnftrssiy pyldfvphsh sgkwnpcrep
      121 ylyndtevvq rlscmalknk iflvanlgtk qpcerseprc ppdgryqfnt nvafaadgal
      181 latyrkhnly fenafdtpae pdyaffdtpf agkfgmftcf dilffepavs lirqynlkqi
      241 vyptawmnql pllsavefqq afstafnvni laanihhptl gmtgsgiytp vksfiyhnme
      301 syggklivae ipvitadykt nlesnerfre nlhdscrtft stslddevcf keqetsgrvs
      361 ekgkeqspps fyaemmydnf tfvplwgekg elqvcanslc cylnyrraal sdelyalgvf
      421 dglhtvhgty yvqacalvkc gglsfstcgq evtdatalid fqlwgnmstp yifpllltsg
      481 itldfadhmg wknnhyflsk nrtsagllta alygrwyekd
//
LOCUS       XP_041322228             520 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 8 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322228
VERSION     XP_041322228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="pleckstrin homology domain-containing family A
                     member 8 isoform X1"
                     /calculated_mol_wt=58350
     Region          1..100
                     /region_name="PH_FAPP1_FAPP2"
                     /note="Four phosphate adaptor protein 1 and 2 Pleckstrin
                     homology (PH) domain; cd01247"
                     /db_xref="CDD:269951"
     Region          331..469
                     /region_name="GLTP"
                     /note="Glycolipid transfer protein (GLTP); pfam08718"
                     /db_xref="CDD:462575"
     CDS             1..520
                     /gene="PLEKHA8"
                     /coded_by="XM_041466294.1:84..1646"
                     /db_xref="GeneID:121352915"
ORIGIN      
        1 megvlykwtn ylsgwqprwf llcggilsyy dsqedawkgc kgsiqmavce iqvhpadntr
       61 mdliipgeqy fylkarnave rqkwlvalgt akacltdsrt qkekeftent ealktkmsel
      121 rlycnllvqq vhktkeasis gvsepeseid mgallkstcd tflktleecm qiantaftse
      181 llhqtppgsp nlavlrtskv khsvlsshts terqvelnhc engcvkaein yqeqaviksm
      241 eclnletneg tggvyvedhv akdlagikdd gedklqaveg cgahrllqse tnslsgltlc
      301 eeernendsp tffsvmsnrf sdielreeeg ipteeflesc yaivpvldkl gptvfapvkm
      361 dfvgnikkin qkfitnkeef dtlqkivlhe vnagvaqvrn sateallwlk rglkflkgfl
      421 tevkngekni qtalnnaygk tlrqhhgwvv rgvfalalra aptyedfvaa lsvdecdpqe
      481 etfykgmqrd lniylpamek qlnildtlye ihglesdevv
//
LOCUS       XP_041322229             456 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 8 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322229
VERSION     XP_041322229.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466295.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="pleckstrin homology domain-containing family A
                     member 8 isoform X2"
                     /calculated_mol_wt=51044
     Region          1..100
                     /region_name="PH_FAPP1_FAPP2"
                     /note="Four phosphate adaptor protein 1 and 2 Pleckstrin
                     homology (PH) domain; cd01247"
                     /db_xref="CDD:269951"
     Region          331..456
                     /region_name="GLTP"
                     /note="Glycolipid transfer protein (GLTP); pfam08718"
                     /db_xref="CDD:462575"
     CDS             1..456
                     /gene="PLEKHA8"
                     /coded_by="XM_041466295.1:84..1454"
                     /db_xref="GeneID:121352915"
ORIGIN      
        1 megvlykwtn ylsgwqprwf llcggilsyy dsqedawkgc kgsiqmavce iqvhpadntr
       61 mdliipgeqy fylkarnave rqkwlvalgt akacltdsrt qkekeftent ealktkmsel
      121 rlycnllvqq vhktkeasis gvsepeseid mgallkstcd tflktleecm qiantaftse
      181 llhqtppgsp nlavlrtskv khsvlsshts terqvelnhc engcvkaein yqeqaviksm
      241 eclnletneg tggvyvedhv akdlagikdd gedklqaveg cgahrllqse tnslsgltlc
      301 eeernendsp tffsvmsnrf sdielreeeg ipteeflesc yaivpvldkl gptvfapvkm
      361 dfvgnikkin qkfitnkeef dtlqkivlhe vnagvaqvrn sateallwlk rglkflkgfl
      421 tevkngekni qtalnnaygk tlrqhhgwvv rgvfal
//
LOCUS       XP_041322230             215 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322230
VERSION     XP_041322230.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466296.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="peptidyl-prolyl cis-trans isomerase FKBP14"
                     /calculated_mol_wt=24204
     Region          49..138
                     /region_name="FkpA"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG0545"
                     /db_xref="CDD:440311"
     Region          <148..>209
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..215
                     /gene="FKBP14"
                     /coded_by="XM_041466296.1:107..754"
                     /db_xref="GeneID:121352917"
ORIGIN      
        1 maagllllcs allcaalgca gaalippaad vkvevlhkpf lchrrtkwgd mllvhyegyl
       61 erdgsmfhst hkhnngqpmw ftlgirealk gwdrglkdmc vgekrkltip palaygkegk
      121 gkippestli fnidlleirn gprshesfqe mdlnddwkls kqevkiylkk efekhgavvn
      181 dtqhdalved ifdkededsd gfisarefty khdel
//
LOCUS       XP_041322231             815 aa            linear   VRT 06-MAY-2021
DEFINITION  tax1-binding protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322231
VERSION     XP_041322231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="tax1-binding protein 1 isoform X1"
                     /calculated_mol_wt=93782
     Region          22..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          130..>449
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          <349..>601
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          754..780
                     /region_name="Zn-C2H2_12"
                     /note="Autophagy receptor zinc finger-C2H2 domain;
                     pfam18112"
                     /db_xref="CDD:407946"
     Region          781..807
                     /region_name="Zn-C2H2_TAX1BP1_rpt2"
                     /note="second C2H2-type zinc binding domain found in
                     tax1-binding protein 1 (TAX1BP1) and similar proteins;
                     cd21970"
                     /db_xref="CDD:412016"
     CDS             1..815
                     /gene="TAX1BP1"
                     /coded_by="XM_041466297.1:318..2765"
                     /db_xref="GeneID:121352918"
ORIGIN      
        1 mssfqevpss astlqtsnfa hvifqnvaks ylpnthlech ytltqfihph qkdwvgifkv
       61 gwstardyyt flwspmpeny vegstvncvl tfqgyylpnd dgefyqfcyv tykgeirgas
      121 tpfqfrtssp veelltmede gnsdmlvvtt kagllefkce kiikekeell kvtsvleket
      181 tqlrdqveql ekelnhekqr ceqlqaeqke niqasehfkr enndlkkkhd eaaskvlqle
      241 edimtvtqka iaketeldsl kdklkkvmle keqlecvlkt ekdekelyki hlknteient
      301 klvkeiqtfk nldanrenmi syykeevgrl qlliaekenv kkailqsssn kdeasilkeq
      361 lrkaedqiqa skqeavlmsk elsdavnvrd ktmadlhsar lenekfkkql aealaelmkl
      421 knlkneqeas naveqelrre vedlklrlqm aadhykekfk ecqklqkqvn kfteqaktag
      481 hqqkltdasn ietatailtd kklsaspvsp ispdivsesv vkeqvremnk eiaekaekyk
      541 kckqmladek mkcsvyadel aklelkwkeq vkinegvklh laamedqyki qlaekerrik
      601 elasqlelft sekqlgrtpg dqagrmmegq tsqqtlhfrn pyseengpvp avpsrlpvlq
      661 ygnpyaiqer rdgadgafnp deiqrppvrs sfwelddvvc sqpsrnlsrp dgledpedsn
      721 dddntvpsap dppslllrer gtgfcfdssf dvqkkcplcd vmfppnydqs kfeehveshw
      781 kvcpmcseqf ppdydqqgfe rhvqthfdqn vlnfd
//
LOCUS       XP_041322232             814 aa            linear   VRT 06-MAY-2021
DEFINITION  tax1-binding protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322232
VERSION     XP_041322232.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466298.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..814
                     /product="tax1-binding protein 1 isoform X2"
                     /calculated_mol_wt=93654
     Region          22..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          130..>449
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          <349..>601
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          753..779
                     /region_name="Zn-C2H2_12"
                     /note="Autophagy receptor zinc finger-C2H2 domain;
                     pfam18112"
                     /db_xref="CDD:407946"
     Region          780..806
                     /region_name="Zn-C2H2_TAX1BP1_rpt2"
                     /note="second C2H2-type zinc binding domain found in
                     tax1-binding protein 1 (TAX1BP1) and similar proteins;
                     cd21970"
                     /db_xref="CDD:412016"
     CDS             1..814
                     /gene="TAX1BP1"
                     /coded_by="XM_041466298.1:319..2763"
                     /db_xref="GeneID:121352918"
ORIGIN      
        1 mssfqevpss astlqtsnfa hvifqnvaks ylpnthlech ytltqfihph qkdwvgifkv
       61 gwstardyyt flwspmpeny vegstvncvl tfqgyylpnd dgefyqfcyv tykgeirgas
      121 tpfqfrtssp veelltmede gnsdmlvvtt kagllefkce kiikekeell kvtsvleket
      181 tqlrdqveql ekelnhekqr ceqlqaeqke niqasehfkr enndlkkkhd eaaskvlqle
      241 edimtvtqka iaketeldsl kdklkkvmle keqlecvlkt ekdekelyki hlknteient
      301 klvkeiqtfk nldanrenmi syykeevgrl qlliaekenv kkailqsssn kdeasilkeq
      361 lrkaedqiqa skqeavlmsk elsdavnvrd ktmadlhsar lenekfkkql aealaelmkl
      421 knlkneqeas naveqelrre vedlklrlqm aadhykekfk ecqklqkqvn kfteqaktag
      481 hqqkltdasn ietatailtd kklsaspvsp ispdivsesv vkeqvremnk eiaekaekyk
      541 kckqmladek mkcsvyadel aklelkwkeq vkinegvklh laamedqyki qlaekerrik
      601 elasqlelft seklgrtpgd qagrmmegqt sqqtlhfrnp yseengpvpa vpsrlpvlqy
      661 gnpyaiqerr dgadgafnpd eiqrppvrss fwelddvvcs qpsrnlsrpd gledpedsnd
      721 ddntvpsapd ppslllrerg tgfcfdssfd vqkkcplcdv mfppnydqsk feehveshwk
      781 vcpmcseqfp pdydqqgfer hvqthfdqnv lnfd
//
LOCUS       XP_041322234             773 aa            linear   VRT 06-MAY-2021
DEFINITION  tax1-binding protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322234
VERSION     XP_041322234.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466300.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..773
                     /product="tax1-binding protein 1 isoform X3"
                     /calculated_mol_wt=88847
     Region          22..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          130..>449
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          <349..>552
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          712..738
                     /region_name="Zn-C2H2_12"
                     /note="Autophagy receptor zinc finger-C2H2 domain;
                     pfam18112"
                     /db_xref="CDD:407946"
     Region          739..765
                     /region_name="Zn-C2H2_TAX1BP1_rpt2"
                     /note="second C2H2-type zinc binding domain found in
                     tax1-binding protein 1 (TAX1BP1) and similar proteins;
                     cd21970"
                     /db_xref="CDD:412016"
     CDS             1..773
                     /gene="TAX1BP1"
                     /coded_by="XM_041466300.1:318..2639"
                     /db_xref="GeneID:121352918"
ORIGIN      
        1 mssfqevpss astlqtsnfa hvifqnvaks ylpnthlech ytltqfihph qkdwvgifkv
       61 gwstardyyt flwspmpeny vegstvncvl tfqgyylpnd dgefyqfcyv tykgeirgas
      121 tpfqfrtssp veelltmede gnsdmlvvtt kagllefkce kiikekeell kvtsvleket
      181 tqlrdqveql ekelnhekqr ceqlqaeqke niqasehfkr enndlkkkhd eaaskvlqle
      241 edimtvtqka iaketeldsl kdklkkvmle keqlecvlkt ekdekelyki hlknteient
      301 klvkeiqtfk nldanrenmi syykeevgrl qlliaekenv kkailqsssn kdeasilkeq
      361 lrkaedqiqa skqeavlmsk elsdavnvrd ktmadlhsar lenekfkkql aealaelmkl
      421 knlkneqeas naveqelrre vedlklrlqm aadhykekfk ecqklqkqvn kfteqaktag
      481 hqqkltdasn ietatailtd kklsaspvsp ispdivsesv vkeqvremnk eiaekaekyk
      541 kckqmlaiql aekerrikel asqlelftse kqlgrtpgdq agrmmegqts qqtlhfrnpy
      601 seengpvpav psrlpvlqyg npyaiqerrd gadgafnpde iqrppvrssf welddvvcsq
      661 psrnlsrpdg ledpedsndd dntvpsapdp pslllrergt gfcfdssfdv qkkcplcdvm
      721 fppnydqskf eehveshwkv cpmcseqfpp dydqqgferh vqthfdqnvl nfd
//
LOCUS       XP_041322235             772 aa            linear   VRT 06-MAY-2021
DEFINITION  tax1-binding protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322235
VERSION     XP_041322235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="tax1-binding protein 1 isoform X4"
                     /calculated_mol_wt=88718
     Region          22..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          130..>449
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          <349..>552
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          711..737
                     /region_name="Zn-C2H2_12"
                     /note="Autophagy receptor zinc finger-C2H2 domain;
                     pfam18112"
                     /db_xref="CDD:407946"
     Region          738..764
                     /region_name="Zn-C2H2_TAX1BP1_rpt2"
                     /note="second C2H2-type zinc binding domain found in
                     tax1-binding protein 1 (TAX1BP1) and similar proteins;
                     cd21970"
                     /db_xref="CDD:412016"
     CDS             1..772
                     /gene="TAX1BP1"
                     /coded_by="XM_041466301.1:319..2637"
                     /db_xref="GeneID:121352918"
ORIGIN      
        1 mssfqevpss astlqtsnfa hvifqnvaks ylpnthlech ytltqfihph qkdwvgifkv
       61 gwstardyyt flwspmpeny vegstvncvl tfqgyylpnd dgefyqfcyv tykgeirgas
      121 tpfqfrtssp veelltmede gnsdmlvvtt kagllefkce kiikekeell kvtsvleket
      181 tqlrdqveql ekelnhekqr ceqlqaeqke niqasehfkr enndlkkkhd eaaskvlqle
      241 edimtvtqka iaketeldsl kdklkkvmle keqlecvlkt ekdekelyki hlknteient
      301 klvkeiqtfk nldanrenmi syykeevgrl qlliaekenv kkailqsssn kdeasilkeq
      361 lrkaedqiqa skqeavlmsk elsdavnvrd ktmadlhsar lenekfkkql aealaelmkl
      421 knlkneqeas naveqelrre vedlklrlqm aadhykekfk ecqklqkqvn kfteqaktag
      481 hqqkltdasn ietatailtd kklsaspvsp ispdivsesv vkeqvremnk eiaekaekyk
      541 kckqmlaiql aekerrikel asqlelftse klgrtpgdqa grmmegqtsq qtlhfrnpys
      601 eengpvpavp srlpvlqygn pyaiqerrdg adgafnpdei qrppvrssfw elddvvcsqp
      661 srnlsrpdgl edpedsnddd ntvpsapdpp slllrergtg fcfdssfdvq kkcplcdvmf
      721 ppnydqskfe ehveshwkvc pmcseqfppd ydqqgferhv qthfdqnvln fd
//
LOCUS       XP_041322236             753 aa            linear   VRT 06-MAY-2021
DEFINITION  tax1-binding protein 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322236
VERSION     XP_041322236.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466302.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="tax1-binding protein 1 isoform X5"
                     /calculated_mol_wt=86553
     Region          22..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          130..>387
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          <286..>539
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          692..718
                     /region_name="Zn-C2H2_12"
                     /note="Autophagy receptor zinc finger-C2H2 domain;
                     pfam18112"
                     /db_xref="CDD:407946"
     Region          719..745
                     /region_name="Zn-C2H2_TAX1BP1_rpt2"
                     /note="second C2H2-type zinc binding domain found in
                     tax1-binding protein 1 (TAX1BP1) and similar proteins;
                     cd21970"
                     /db_xref="CDD:412016"
     CDS             1..753
                     /gene="TAX1BP1"
                     /coded_by="XM_041466302.1:317..2578"
                     /db_xref="GeneID:121352918"
ORIGIN      
        1 mssfqevpss astlqtsnfa hvifqnvaks ylpnthlech ytltqfihph qkdwvgifkv
       61 gwstardyyt flwspmpeny vegstvncvl tfqgyylpnd dgefyqfcyv tykgeirgas
      121 tpfqfrtssp veelltmede gnsdmlvvtt kagllefkce kiikekeell kvtsvleket
      181 tqlrdqveql ekelnhekqr ceqlqaeqke niqasehfkr enndlkkkhd eaaskvlqle
      241 edimtvtqka iaketeldsl kdklkkvmle keqlecvlkt ekdekelykd easilkeqlr
      301 kaedqiqask qeavlmskel sdavnvrdkt madlhsarle nekfkkqlae alaelmklkn
      361 lkneqeasna veqelrreve dlklrlqmaa dhykekfkec qklqkqvnkf teqaktaghq
      421 qkltdasnie tatailtdkk lsaspvspis pdivsesvvk eqvremnkei aekaekykkc
      481 kqmladekmk csvyadelak lelkwkeqvk inegvklhla amedqykiql aekerrikel
      541 asqlelftse kqlgrtpgdq agrmmegqts qqtlhfrnpy seengpvpav psrlpvlqyg
      601 npyaiqerrd gadgafnpde iqrppvrssf welddvvcsq psrnlsrpdg ledpedsndd
      661 dntvpsapdp pslllrergt gfcfdssfdv qkkcplcdvm fppnydqskf eehveshwkv
      721 cpmcseqfpp dydqqgferh vqthfdqnvl nfd
//
LOCUS       XP_041322237             744 aa            linear   VRT 06-MAY-2021
DEFINITION  tax1-binding protein 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322237
VERSION     XP_041322237.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466303.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..744
                     /product="tax1-binding protein 1 isoform X6"
                     /calculated_mol_wt=86014
     Region          22..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          130..>543
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          683..709
                     /region_name="Zn-C2H2_12"
                     /note="Autophagy receptor zinc finger-C2H2 domain;
                     pfam18112"
                     /db_xref="CDD:407946"
     Region          710..736
                     /region_name="Zn-C2H2_TAX1BP1_rpt2"
                     /note="second C2H2-type zinc binding domain found in
                     tax1-binding protein 1 (TAX1BP1) and similar proteins;
                     cd21970"
                     /db_xref="CDD:412016"
     CDS             1..744
                     /gene="TAX1BP1"
                     /coded_by="XM_041466303.1:317..2551"
                     /db_xref="GeneID:121352918"
ORIGIN      
        1 mssfqevpss astlqtsnfa hvifqnvaks ylpnthlech ytltqfihph qkdwvgifkv
       61 gwstardyyt flwspmpeny vegstvncvl tfqgyylpnd dgefyqfcyv tykgeirgas
      121 tpfqfrtssp veelltmede gnsdmlvvtt kagllefkce kiikekeell kvtsvleket
      181 tqlrdqveql ekelnhekqr ceqlqaeqke niqasehfkr enndlkkkhd eaaskvlqle
      241 edimtvtqka iaketeldsl kdklkkvmle keqlecvlkt ekdekelyki hlknteient
      301 klvkeiqtfk nldanrenmi syykeevgrl qlliaekenv kkailqsssn kdeasilkeq
      361 lrkaedqiqa skqeavlmsk elsdavnvrd ktmadlhsar lenekfkkql aealaelmkl
      421 knlkneqeas naveqelrre vedlklrlqm aadhykekfk ecqklqkqvn kfteqadekm
      481 kcsvyadela klelkwkeqv kinegvklhl aamedqykiq laekerrike lasqlelfts
      541 ekqlgrtpgd qagrmmegqt sqqtlhfrnp yseengpvpa vpsrlpvlqy gnpyaiqerr
      601 dgadgafnpd eiqrppvrss fwelddvvcs qpsrnlsrpd gledpedsnd ddntvpsapd
      661 ppslllrerg tgfcfdssfd vqkkcplcdv mfppnydqsk feehveshwk vcpmcseqfp
      721 pdydqqgfer hvqthfdqnv lnfd
//
LOCUS       XP_041322238             682 aa            linear   VRT 06-MAY-2021
DEFINITION  tax1-binding protein 1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041322238
VERSION     XP_041322238.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466304.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..682
                     /product="tax1-binding protein 1 isoform X7"
                     /calculated_mol_wt=78785
     Region          22..125
                     /region_name="SKICH"
                     /note="SKICH domain; pfam17751"
                     /db_xref="CDD:465482"
     Region          130..>481
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          621..647
                     /region_name="Zn-C2H2_12"
                     /note="Autophagy receptor zinc finger-C2H2 domain;
                     pfam18112"
                     /db_xref="CDD:407946"
     Region          648..674
                     /region_name="Zn-C2H2_TAX1BP1_rpt2"
                     /note="second C2H2-type zinc binding domain found in
                     tax1-binding protein 1 (TAX1BP1) and similar proteins;
                     cd21970"
                     /db_xref="CDD:412016"
     CDS             1..682
                     /gene="TAX1BP1"
                     /coded_by="XM_041466304.1:316..2364"
                     /db_xref="GeneID:121352918"
ORIGIN      
        1 mssfqevpss astlqtsnfa hvifqnvaks ylpnthlech ytltqfihph qkdwvgifkv
       61 gwstardyyt flwspmpeny vegstvncvl tfqgyylpnd dgefyqfcyv tykgeirgas
      121 tpfqfrtssp veelltmede gnsdmlvvtt kagllefkce kiikekeell kvtsvleket
      181 tqlrdqveql ekelnhekqr ceqlqaeqke niqasehfkr enndlkkkhd eaaskvlqle
      241 edimtvtqka iaketeldsl kdklkkvmle keqlecvlkt ekdekelykd easilkeqlr
      301 kaedqiqask qeavlmskel sdavnvrdkt madlhsarle nekfkkqlae alaelmklkn
      361 lkneqeasna veqelrreve dlklrlqmaa dhykekfkec qklqkqvnkf teqadekmkc
      421 svyadelakl elkwkeqvki negvklhlaa medqykiqla ekerrikela sqlelftsek
      481 qlgrtpgdqa grmmegqtsq qtlhfrnpys eengpvpavp srlpvlqygn pyaiqerrdg
      541 adgafnpdei qrppvrssfw elddvvcsqp srnlsrpdgl edpedsnddd ntvpsapdpp
      601 slllrergtg fcfdssfdvq kkcplcdvmf ppnydqskfe ehveshwkvc pmcseqfppd
      661 ydqqgferhv qthfdqnvln fd
//
LOCUS       XP_041322239            1593 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322239
VERSION     XP_041322239.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466305.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1593
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=183049
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1534..1579
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1593
                     /gene="FYCO1"
                     /coded_by="XM_041466305.1:959..5740"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlcvcwakql lgalyslqsp fqvsafhtir pvihtwcyfs vhpehtpflr nstcnsstfd
     1441 esedwqvaqd aeicllksge immklpltve eimnfgesnr elfiksstys iipitvtemg
     1501 ltiswifssd pksisfsivy qesedtpldq ckvlipmtrc nshketirgq vkvrnagiyt
     1561 lifdntfsrf iskrvfyhla verpviydgs dfp
//
LOCUS       XP_041322240            1593 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322240
VERSION     XP_041322240.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466306.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1593
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=183049
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1534..1579
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1593
                     /gene="FYCO1"
                     /coded_by="XM_041466306.1:704..5485"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlcvcwakql lgalyslqsp fqvsafhtir pvihtwcyfs vhpehtpflr nstcnsstfd
     1441 esedwqvaqd aeicllksge immklpltve eimnfgesnr elfiksstys iipitvtemg
     1501 ltiswifssd pksisfsivy qesedtpldq ckvlipmtrc nshketirgq vkvrnagiyt
     1561 lifdntfsrf iskrvfyhla verpviydgs dfp
//
LOCUS       XP_041322241            1593 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322241
VERSION     XP_041322241.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466307.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1593
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=183049
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1534..1579
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1593
                     /gene="FYCO1"
                     /coded_by="XM_041466307.1:828..5609"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlcvcwakql lgalyslqsp fqvsafhtir pvihtwcyfs vhpehtpflr nstcnsstfd
     1441 esedwqvaqd aeicllksge immklpltve eimnfgesnr elfiksstys iipitvtemg
     1501 ltiswifssd pksisfsivy qesedtpldq ckvlipmtrc nshketirgq vkvrnagiyt
     1561 lifdntfsrf iskrvfyhla verpviydgs dfp
//
LOCUS       XP_041322242            1593 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322242
VERSION     XP_041322242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466308.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1593
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=183049
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1534..1579
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1593
                     /gene="FYCO1"
                     /coded_by="XM_041466308.1:277..5058"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlcvcwakql lgalyslqsp fqvsafhtir pvihtwcyfs vhpehtpflr nstcnsstfd
     1441 esedwqvaqd aeicllksge immklpltve eimnfgesnr elfiksstys iipitvtemg
     1501 ltiswifssd pksisfsivy qesedtpldq ckvlipmtrc nshketirgq vkvrnagiyt
     1561 lifdntfsrf iskrvfyhla verpviydgs dfp
//
LOCUS       XP_041322244            1593 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322244
VERSION     XP_041322244.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466310.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1593
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=183049
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1534..1579
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1593
                     /gene="FYCO1"
                     /coded_by="XM_041466310.1:148..4929"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlcvcwakql lgalyslqsp fqvsafhtir pvihtwcyfs vhpehtpflr nstcnsstfd
     1441 esedwqvaqd aeicllksge immklpltve eimnfgesnr elfiksstys iipitvtemg
     1501 ltiswifssd pksisfsivy qesedtpldq ckvlipmtrc nshketirgq vkvrnagiyt
     1561 lifdntfsrf iskrvfyhla verpviydgs dfp
//
LOCUS       XP_041322245            1573 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322245
VERSION     XP_041322245.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466311.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1573
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=180600
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1514..1559
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1573
                     /gene="FYCO1"
                     /coded_by="XM_041466311.1:958..5679"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlcvcwakql lgalyslqsp fqvsafhtir nstcnsstfd esedwqvaqd aeicllksge
     1441 immklpltve eimnfgesnr elfiksstys iipitvtemg ltiswifssd pksisfsivy
     1501 qesedtpldq ckvlipmtrc nshketirgq vkvrnagiyt lifdntfsrf iskrvfyhla
     1561 verpviydgs dfp
//
LOCUS       XP_041322246            1565 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322246
VERSION     XP_041322246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1565
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X3"
                     /calculated_mol_wt=179900
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1506..1551
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1565
                     /gene="FYCO1"
                     /coded_by="XM_041466312.1:958..5655"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlpvihtwcy fsvhpehtpf lrnstcnsst fdesedwqva qdaeicllks geimmklplt
     1441 veeimnfges nrelfiksst ysiipitvte mgltiswifs sdpksisfsi vyqesedtpl
     1501 dqckvlipmt rcnshketir gqvkvrnagi ytlifdntfs rfiskrvfyh laverpviyd
     1561 gsdfp
//
LOCUS       XP_041322247            1562 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322247
VERSION     XP_041322247.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466313.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1562
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X4"
                     /calculated_mol_wt=179469
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          923..>1207
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1208..1265
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1208,1211,1229..1234,1236..1237,1259..1261)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1503..1548
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1562
                     /gene="FYCO1"
                     /coded_by="XM_041466313.1:959..5647"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa ntslcrklde arqqlseses arlqkeeevt slrelleriq keadeakeki
     1141 ldyteklskv aadkdssdqk lfaelddltr tkqfleerli elirdkdalw qksdalefqq
     1201 klsaeqrwqg dtevnhcldc qrefswmvrr hhcrmcgrif cyyccnnymv tkpagkkerc
     1261 cracfnkprv fvdstddsgs sanqegspas lespvspper afvanedskp pddaafdiit
     1321 deelcqvqes dslhnesqme kdsldqsvtd lcvcwakqll galyslqspf qvsafhtirp
     1381 vihtwcyfsv hpehtpflrn stcnsstfde sedwqvaqda eicllksgei mmklpltvee
     1441 imnfgesnre lfiksstysi ipitvtemgl tiswifssdp ksisfsivyq esedtpldqc
     1501 kvlipmtrcn shketirgqv kvrnagiytl ifdntfsrfi skrvfyhlav erpviydgsd
     1561 fp
//
LOCUS       XP_041322248            1545 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE and coiled-coil domain-containing protein 1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322248
VERSION     XP_041322248.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466314.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1545
                     /product="FYVE and coiled-coil domain-containing protein 1
                     isoform X5"
                     /calculated_mol_wt=177451
     Region          7..164
                     /region_name="RUN_FYCO1"
                     /note="RUN domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd17698"
                     /db_xref="CDD:439060"
     Region          243..>481
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          411..1036
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          933..>1238
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1239..1296
                     /region_name="FYVE_FYCO1"
                     /note="FYVE domain found in FYVE and coiled-coil
                     domain-containing protein 1 (FYCO1) and similar proteins;
                     cd15726"
                     /db_xref="CDD:277265"
     Site            order(1239,1242,1260..1265,1267..1268,1290..1292)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277265"
     Region          <1486..1531
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; cl46312"
                     /db_xref="CDD:480652"
     CDS             1..1545
                     /gene="FYCO1"
                     /coded_by="XM_041466314.1:958..5595"
                     /db_xref="GeneID:121352919"
ORIGIN      
        1 maatsgesql qriirdlqda vtelskefke ggepitddsv nlqkfsykle yllqfdqkek
       61 ntllgnrkdy wdyfcdclak ikgandgirf vksitelrts lgkgraflry slvhqrladt
      121 lqqcfmntkv tsdwyyarsp flnskmssdi vgqlyeltdv qfdlasrgyd ldaawpafar
      181 rtlsslgssa ylwkppsrss smsslvsnyl qaqefpsspd vnnslnaehl egyeemrlel
      241 dqaelrqrel qdrihqleie nqelqaavsl qkeqvqveke ksnnyseens rltkmitelq
      301 kqyevshstq stvhdlqkcl qslelsaveq qkehstkveq lltskedcas klqvsnqele
      361 tsraliavkd lcidelkakl ssteqknlnl lakvdaalee kgqqataqyd salqiralle
      421 klqemekeka dmqrlnaeha sqlkaareel llkeqaqkel esryssltan skeesekltg
      481 sletmakekd alqealtlkg kemaelqtqv mgslaqvgll eknleearke kekleeeygr
      541 regalkqeaq lqaeqlelqe grltkvsqtv cslqeqnqkl msekehlrqk vkeleeqmeq
      601 qnsavselde esrklkaene nlqqskkkme eklknleask asleadvarl rasekqlqse
      661 iddalvsvde kekklrsenk qldedlqnar rqsqileerl ealhseyeel kqreetskes
      721 yasleaqmks akqhglqmek sldtlkeske slqsqltqke velqgmesqc qqlraeaerh
      781 rkraetleie klsvektclh qtklieslts ekesvekqql qqsaslekea kelafrltms
      841 eeqlevnrge vsrlqaevld lrvklqqatd erermrgela vtetvlseqk tlvqqlkeqs
      901 eslnrnhvqe lvqckeredk lkkeqertah qkaelennlm nlreelskvk rylenarven
      961 eenkdllhrt ntdmaelgiq icaltsekvd aeeqlaqate rfkeleeqaa eqqeklkldi
     1021 snlreenksl qekleeaqmc aaavpslqlq letikkqaqs fqetsqeels aikfqmstei
     1081 lnyqtkfkaa seecgkvreq leeqkrqqha aeeeitelqa antslcrkld earqqlsese
     1141 sarlqkeeev tslrelleri qkeadeakek ildyteklsk vaadkdssdq klfaelddlt
     1201 rtkqfleerl ielirdkdal wqksdalefq qklsaeqrwq gdtevnhcld cqrefswmvr
     1261 rhhcrmcgri fcyyccnnym vtkpagkker ccracfnkpr vfvdstddsg ssanqegspa
     1321 slespvsppe rafvanedsk ppddaafdii tdeelcqvqe sdslhnesqm ekdsldqsvt
     1381 dlnstcnsst fdesedwqva qdaeicllks geimmklplt veeimnfges nrelfiksst
     1441 ysiipitvte mgltiswifs sdpksisfsi vyqesedtpl dqckvlipmt rcnshketir
     1501 gqvkvrnagi ytlifdntfs rfiskrvfyh laverpviyd gsdfp
//
LOCUS       XP_041322249             351 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 8-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322249
VERSION     XP_041322249.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466315.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="C-C chemokine receptor type 8-like"
                     /calculated_mol_wt=39003
     Region          36..311
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          38..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          279..304
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..351
                     /gene="LOC121352920"
                     /coded_by="XM_041466315.1:1310..2365"
                     /db_xref="GeneID:121352920"
ORIGIN      
        1 mnptsqfigt teydygyden tapcnegnnf rrfkslflpi lyclvfvfcl lgnslvlwvl
       61 ltrkrlttmt dicllnlaas dllfvlplpf qahyasdqwv fgnamckima giyytgfyss
      121 iffitlmsid ryiaivhavy amrirtatcg iiislilwll aglasvpnim fsqeleieqa
      181 wqcvpmyppg dntwkvasqf tvnilgllip fsilvccytq ilknlqkckn rnkvkaikmi
      241 fiivivfflf wtpfnitlfl dtlqslhvin dckassqial alqltetisf ihcclnpiiy
      301 afagvtfkah lkgllqscgr vlaspaggag agqsfsapsq lsgwsdsagv l
//
LOCUS       XP_041322250             351 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 8-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322250
VERSION     XP_041322250.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466316.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="C-C chemokine receptor type 8-like"
                     /calculated_mol_wt=39003
     Region          36..311
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          38..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          279..304
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..351
                     /gene="LOC121352920"
                     /coded_by="XM_041466316.1:1106..2161"
                     /db_xref="GeneID:121352920"
ORIGIN      
        1 mnptsqfigt teydygyden tapcnegnnf rrfkslflpi lyclvfvfcl lgnslvlwvl
       61 ltrkrlttmt dicllnlaas dllfvlplpf qahyasdqwv fgnamckima giyytgfyss
      121 iffitlmsid ryiaivhavy amrirtatcg iiislilwll aglasvpnim fsqeleieqa
      181 wqcvpmyppg dntwkvasqf tvnilgllip fsilvccytq ilknlqkckn rnkvkaikmi
      241 fiivivfflf wtpfnitlfl dtlqslhvin dckassqial alqltetisf ihcclnpiiy
      301 afagvtfkah lkgllqscgr vlaspaggag agqsfsapsq lsgwsdsagv l
//
LOCUS       XP_041322251             351 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 8-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322251
VERSION     XP_041322251.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466317.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="C-C chemokine receptor type 8-like"
                     /calculated_mol_wt=39003
     Region          36..311
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          38..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          279..304
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..351
                     /gene="LOC121352920"
                     /coded_by="XM_041466317.1:1182..2237"
                     /db_xref="GeneID:121352920"
ORIGIN      
        1 mnptsqfigt teydygyden tapcnegnnf rrfkslflpi lyclvfvfcl lgnslvlwvl
       61 ltrkrlttmt dicllnlaas dllfvlplpf qahyasdqwv fgnamckima giyytgfyss
      121 iffitlmsid ryiaivhavy amrirtatcg iiislilwll aglasvpnim fsqeleieqa
      181 wqcvpmyppg dntwkvasqf tvnilgllip fsilvccytq ilknlqkckn rnkvkaikmi
      241 fiivivfflf wtpfnitlfl dtlqslhvin dckassqial alqltetisf ihcclnpiiy
      301 afagvtfkah lkgllqscgr vlaspaggag agqsfsapsq lsgwsdsagv l
//
LOCUS       XP_041322252             351 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 8-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322252
VERSION     XP_041322252.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466318.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="C-C chemokine receptor type 8-like"
                     /calculated_mol_wt=39003
     Region          36..311
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          38..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          279..304
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..351
                     /gene="LOC121352920"
                     /coded_by="XM_041466318.1:1150..2205"
                     /db_xref="GeneID:121352920"
ORIGIN      
        1 mnptsqfigt teydygyden tapcnegnnf rrfkslflpi lyclvfvfcl lgnslvlwvl
       61 ltrkrlttmt dicllnlaas dllfvlplpf qahyasdqwv fgnamckima giyytgfyss
      121 iffitlmsid ryiaivhavy amrirtatcg iiislilwll aglasvpnim fsqeleieqa
      181 wqcvpmyppg dntwkvasqf tvnilgllip fsilvccytq ilknlqkckn rnkvkaikmi
      241 fiivivfflf wtpfnitlfl dtlqslhvin dckassqial alqltetisf ihcclnpiiy
      301 afagvtfkah lkgllqscgr vlaspaggag agqsfsapsq lsgwsdsagv l
//
LOCUS       XP_041322254             334 aa            linear   VRT 06-MAY-2021
DEFINITION  chemokine XC receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322254
VERSION     XP_041322254.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466320.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="chemokine XC receptor 1"
                     /calculated_mol_wt=38487
     Region          34..300
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          35..59
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          68..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          104..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          149..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          189..212
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          230..252
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          268..293
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..334
                     /gene="XCR1"
                     /coded_by="XM_041466320.1:1..1005"
                     /db_xref="GeneID:121352921"
ORIGIN      
        1 mdedyylddn ssyeyphetn vcemgdyftf niyltavlyi lvfflsllgn tlvlwillky
       61 enltsltnif imnlcisdlv fscmlpfwvv dqsfgwifge flckasnaif sigyysgvff
      121 ltlmtilryl fvvnplstlr sqtqccgvlv slavwtvsil ivvpevihtt vqedledhrf
      181 cdyadgnwkk vdiyvrnvlf lfsfgviifc yfkiliillr arsrrkhrtv rliliivvaf
      241 flcwapynil sflttfpppt cqyvkdsnla fhisrkiafs hcclnpvlyv fvgvkfkrhl
      301 aqlcslclhc sngqppspsi gyegkfqneg isly
//
LOCUS       XP_041322255             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322255
VERSION     XP_041322255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466321.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466321.1:455..1870"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322256             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322256
VERSION     XP_041322256.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466322.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466322.1:432..1847"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322257             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322257
VERSION     XP_041322257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466323.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466323.1:471..1886"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322258             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322258
VERSION     XP_041322258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466324.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466324.1:223..1638"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322259             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322259
VERSION     XP_041322259.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466325.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466325.1:390..1805"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322260             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322260
VERSION     XP_041322260.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466326.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466326.1:517..1932"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322261             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322261
VERSION     XP_041322261.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466327.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466327.1:429..1844"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322262             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322262
VERSION     XP_041322262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466328.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466328.1:414..1829"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322263             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322263
VERSION     XP_041322263.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466329.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466329.1:494..1909"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322264             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322264
VERSION     XP_041322264.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466330.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466330.1:324..1739"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322265             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322265
VERSION     XP_041322265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466331.1:391..1806"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322266             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322266
VERSION     XP_041322266.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466332.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466332.1:363..1778"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322268             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322268
VERSION     XP_041322268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466334.1:198..1613"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322269             471 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322269
VERSION     XP_041322269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X1"
                     /calculated_mol_wt=47781
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..471
                     /gene="WIPF3"
                     /coded_by="XM_041466335.1:110..1525"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtagrpgq lsggrapspr psappssgaa kpnnnpshpa egpraavpse ppgssraaag
      181 agpgrpslpa ppppppassk psltfppppp vpppadrpak gvapgaappa plpppqadkp
      241 akppagashp pppppppppp lppvppcgpp graaevsaaa aapaegrdcp pptppppppp
      301 pphahpppan rlsfppspaf sgadvppplp pksphllsqf hkpsniqslp lpptpgppqp
      361 aavvetrkkr pgrgagtgag klvtppqppa rsptteltsk sgvsawatah dpytplkngn
      421 mhiiddfesk ftfhsvedfp ppdefkpfqk typskiprdp sknpplrthv r
//
LOCUS       XP_041322270             470 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322270
VERSION     XP_041322270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..470
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X2"
                     /calculated_mol_wt=47710
     Region          49..78
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(52..53,55..57,59..61,66..69)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          66..69
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..470
                     /gene="WIPF3"
                     /coded_by="XM_041466336.1:457..1869"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mpvppppppp ppppppppsg gppppppsgg pppppplass eipklrkedq karnalladi
       61 qqgtrlrkvt qindrsapqi ekpkganrdg gnpavnkggs qqplgglfag gfpvlrpagq
      121 rdmtgrpgql sggrapsprp sappssgaak pnnnpshpae gpraavpsep pgssraaaga
      181 gpgrpslpap pppppasskp sltfpppppv pppadrpakg vapgaappap lpppqadkpa
      241 kppagashpp pppppppppl ppvppcgppg raaevsaaaa apaegrdcpp ptpppppppp
      301 phahpppanr lsfppspafs gadvppplpp ksphllsqfh kpsniqslpl pptpgppqpa
      361 avvetrkkrp grgagtgagk lvtppqppar sptteltsks gvsawatahd pytplkngnm
      421 hiiddfeskf tfhsvedfpp pdefkpfqkt ypskiprdps knpplrthvr
//
LOCUS       XP_041322271             441 aa            linear   VRT 06-MAY-2021
DEFINITION  WAS/WASL-interacting protein family member 3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322271
VERSION     XP_041322271.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466337.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="WAS/WASL-interacting protein family member 3
                     isoform X3"
                     /calculated_mol_wt=45186
     Region          19..48
                     /region_name="WH2_WAS_WASL-2_3"
                     /note="Wiskott Aldrich syndrome homology region 2 (WH2
                     motif) in WAS/WASL-interacting protein (WIP) family
                     members 2 and 3; cd22077"
                     /db_xref="CDD:409220"
     Site            order(22..23,25..27,29..31,36..39)
                     /site_type="other"
                     /note="actin-binding motif [polypeptide binding]"
                     /db_xref="CDD:409220"
     Region          36..39
                     /region_name="actin-binding sequence"
                     /note="actin-binding sequence [structural motif]"
                     /db_xref="CDD:409220"
     CDS             1..441
                     /gene="WIPF3"
                     /coded_by="XM_041466337.1:163..1488"
                     /db_xref="GeneID:121352922"
ORIGIN      
        1 mvfpfftass eipklrkedq karnalladi qqgtrlrkvt qindrsapqi ekpkganrdg
       61 gnpavnkggs qqplgglfag gfpvlrpagq rdmtagrpgq lsggrapspr psappssgaa
      121 kpnnnpshpa egpraavpse ppgssraaag agpgrpslpa ppppppassk psltfppppp
      181 vpppadrpak gvapgaappa plpppqadkp akppagashp pppppppppp lppvppcgpp
      241 graaevsaaa aapaegrdcp pptppppppp pphahpppan rlsfppspaf sgadvppplp
      301 pksphllsqf hkpsniqslp lpptpgppqp aavvetrkkr pgrgagtgag klvtppqppa
      361 rsptteltsk sgvsawatah dpytplkngn mhiiddfesk ftfhsvedfp ppdefkpfqk
      421 typskiprdp sknpplrthv r
//
LOCUS       XP_041322272             414 aa            linear   VRT 06-MAY-2021
DEFINITION  secernin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322272
VERSION     XP_041322272.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466338.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..414
                     /product="secernin-1"
                     /calculated_mol_wt=45959
     Region          17..>231
                     /region_name="PepD"
                     /note="Dipeptidase [Amino acid transport and metabolism];
                     cl41909"
                     /db_xref="CDD:477862"
     CDS             1..414
                     /gene="SCRN1"
                     /coded_by="XM_041466338.1:34..1278"
                     /db_xref="GeneID:121352924"
ORIGIN      
        1 maaappsycf vafppcskdg lvvfgknsar prdevqevvy faaaehepgs kvectyieie
       61 qvpkthavvl srpswlwgae mganehgvcv aneavvtrep aseseallgm dlvrlglerg
      121 atakealdvi valleehgqg gnyyedgssc htfqsafliv drneawilet sgkywaaeki
      181 tegvkcicnq lslttkidae hpelrnyvks qgwwngesdf nfsevfslad dhlaccsgre
      241 slekqggdvs aqamidvlrd kdsgvcvdse sflttasivs vlpqdpsfpc ihyftgtpdp
      301 srsifkpfif vddvklvpkv qspsfgnddp akkiprfqek pdrrhelyka hewarslles
      361 dqdkgqklmr imldlekqgl eamedilsrt eildpaevvd lfydcvdtel kffk
//
LOCUS       XP_041322273             629 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 light intermediate chain 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322273
VERSION     XP_041322273.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466339.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="cytoplasmic dynein 1 light intermediate chain 1"
                     /calculated_mol_wt=67221
     Region          150..621
                     /region_name="DLIC"
                     /note="Dynein light intermediate chain (DLIC); pfam05783"
                     /db_xref="CDD:368612"
     CDS             1..629
                     /gene="DYNC1LI1"
                     /coded_by="XM_041466339.1:9..1898"
                     /db_xref="GeneID:121352925"
ORIGIN      
        1 mrgascraga argasgtacp wqhlargssa egsraesrsl lrraaagrgr gerlrgaplp
       61 pprprppnir vpagaaappp aprpgeaagq greeeeaaak maaavgrags fgsssssglg
      121 saasfssass aastgtannn naelragded dgqnlwscil sevstrsrsk lpsgknvlll
      181 gedgagktsl igkiqgieey kkgrgmeyly lnvhdedrdd qtrcnvwild gdlyhkgllk
      241 fameasslkd tlvmlvvdms rpwtaldslq kwasvvrehi dklkippeem kemeqklvrd
      301 fqeyiepged fpaspqrrnt slqedkddsv ilplgadtlt cnlgipvvvv ctkcdaisvl
      361 ekehdyrdeh fdfiqshirr fclqygaali ytsvkenkni dlvykyivqk lygfpfnvpa
      421 vvvekdavfi pagwdndkki gilhenfqtl kaddnfedii tkppvrkfvh ekeivaeddq
      481 vflmkqqsql akqpptaagr pvdasprvpg gsprtpnrsv tsnvasvtpi ptgskkidpn
      541 mkagatsegv lanffnslls kktgspggpg gspggggtgg agsnlppsak ksgqkpvltd
      601 vqaeldrisr kpemvsptss tsptegeas
//
LOCUS       XP_041322274            1096 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322274
VERSION     XP_041322274.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466340.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1096
                     /product="histone deacetylase 9 isoform X1"
                     /calculated_mol_wt=121105
     Region          66..152
                     /region_name="ClassIIa_HDAC9_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC9,
                     a Class IIa histone deacetylase; cd10163"
                     /db_xref="CDD:197399"
     Site            order(67..68,70..71,74,78,81,85,88,92..93,95..96,99..100,
                     103,107,110,114,118,122)
                     /site_type="other"
                     /note="dimer interface A, C [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(70..71,74,78,81..82,85..86,88..89,92..93,95..96,
                     99..101,103..105,107..108,110..112,114..115,118..119,
                     122..124)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(78,82,86,89,93,96,100..101,104..105,108,112,115)
                     /site_type="other"
                     /note="dimer interface A, D [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(96,100,111..112,115,119,123..124)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197399"
     Region          659..1037
                     /region_name="HDAC9"
                     /note="Histone deacetylase 9; cd10009"
                     /db_xref="CDD:212533"
     Site            order(810..811,819..820,848,850,942,982)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212533"
     CDS             1..1096
                     /gene="HDAC9"
                     /coded_by="XM_041466340.1:841..4131"
                     /db_xref="GeneID:121352927"
ORIGIN      
        1 mlqtiyeses cfssdgvsgr eqllaqqrmh smissvdvks evpvglepis pldlrtdlrm
       61 mvpmvdpimr ekqlqqelll iqqqqqiqkq lliaefqkqh enltrqhqaq lqehikella
      121 ikqqqellek eqkleqqrqe qelerhrreq qlpplrgker greravaste vkqklqefll
      181 sksatkdspa ngknhsmsrh pklwytaahh tsldqssppl sgasppykyt lpgaqdakdd
      241 fplrktasep nlkvrsrlkq kvterrsspl lrrkdgnvss fkkrlfevte ssvsssspgs
      301 gpsspsngpt ssttendtsv lssniqaerl vsqqrlliqd esvnllslyt spslpnitlg
      361 lpaiqpqisa stsfkekqkg etpplrqgva lagqyggnia pssthphial egkpnsshqa
      421 llqhlllkeq mrqqkllvtg avplhpqspl aakervspgi raahklprhr plnrtqsapl
      481 pqstlaqlvi qqqhqqflek qkqyqqqihm nkmlsksieq lkqpgshlee aeeelhgdhs
      541 mqeerapass asiraesssa gvderigqqv gavkvkeepl dsdedvqtqq mesgeqaafm
      601 qqeflahrhv hqlqiyqaqm atvgmagsdk hrplsrtpss ptdstlphpd mdqpsqhvyt
      661 tgvvydslml khqcmcgnya nhpehagriq siwsrlqetg llnkcerirg rkasleeiql
      721 vhsehhslly gtsplnrqkl dprkllgnvs qklfsllpcg glgvdsdtvw nelhsagaar
      781 mavgcviela arvasrelkn gfavvrppgh haeestamgf cffnsiaita kylrdklnig
      841 kilivdldvh hgngtqqafy adpsilyvsl hrydegnffp gsgapnevgs gpgegynini
      901 awtggldppm gdveyltafr tvimpaanef dpeivlvsag fdaveghdpp lggykvtakc
      961 fghltkqllk ladgrvvlal egghdltaic daseacinal lgneleplpe divhqipnmn
     1021 aiaslkktte iqskywksve pysvpvdcal aesqkqeree tetvsamasl svdveqcipq
     1081 egsraagepm eeepal
//
LOCUS       XP_041322276             621 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322276
VERSION     XP_041322276.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466342.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..621
                     /product="histone deacetylase 9 isoform X2"
                     /calculated_mol_wt=69314
     Region          66..155
                     /region_name="ClassIIa_HDAC9_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC9,
                     a Class IIa histone deacetylase; cd10163"
                     /db_xref="CDD:197399"
     Site            order(67..68,70..71,74,78,81,85,88,92..93,95..96,99..100,
                     103,107,110,114,121,125)
                     /site_type="other"
                     /note="dimer interface A, C [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(70..71,74,78,81..82,85..86,88..89,92..93,95..96,
                     99..101,103..105,107..108,110..112,114..115,121..122,
                     125..127)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(78,82,86,89,93,96,100..101,104..105,108,112,115)
                     /site_type="other"
                     /note="dimer interface A, D [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(96,100,111..112,115,122,126..127)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197399"
     CDS             1..621
                     /gene="HDAC9"
                     /coded_by="XM_041466342.1:548..2413"
                     /db_xref="GeneID:121352927"
ORIGIN      
        1 mlqtiyeses cfssdgvsgr eqllaqqrmh smissvdvks evpvglepis pldlrtdlrm
       61 mvpmvdpimr ekqlqqelll iqqqqqiqkq lliaefqkqh enltrqhqaq lqehiklqqe
      121 llaikqqqel lekeqkleqq rqeqelerhr reqqlpplrg kergrerava stevkqklqe
      181 fllsksatkd spangknhsm srhpklwyta ahhtsldqss pplsgasppy kytlpgaqda
      241 kddfplrkta sepnlkvrsr lkqkvterrs spllrrkdgn vssfkkrlfe vtessvssss
      301 pgsgpsspsn gptssttend tsvlssniqa erlvsqqrll iqdesvnlls lytspslpni
      361 tlglpaiqpq isastsfkek qkgetpplrq gvalagqygg niapssthph ialegkpnss
      421 hqallqhlll keqmrqqkll vtgavplhpq splaakervs pgiraahklp rhrplnrtqs
      481 aplpqstlaq lviqqqhqqf lekqkqyqqq ihmnkmlsks ieqlkqpgsh leeaeeelhg
      541 dhsmqeerap assasiraes ssagvderig qqvgavkvke epldsdedvq tqqmesgeqa
      601 afmqqvigkd lapgfvikvi i
//
LOCUS       XP_041322277             619 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 9 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322277
VERSION     XP_041322277.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466343.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="histone deacetylase 9 isoform X3"
                     /calculated_mol_wt=69049
     Region          66..155
                     /region_name="ClassIIa_HDAC9_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC9,
                     a Class IIa histone deacetylase; cd10163"
                     /db_xref="CDD:197399"
     Site            order(67..68,70..71,74,78,81,85,88,92..93,95..96,99..100,
                     103,107,110,114,121,125)
                     /site_type="other"
                     /note="dimer interface A, C [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(70..71,74,78,81..82,85..86,88..89,92..93,95..96,
                     99..101,103..105,107..108,110..112,114..115,121..122,
                     125..127)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(78,82,86,89,93,96,100..101,104..105,108,112,115)
                     /site_type="other"
                     /note="dimer interface A, D [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(96,100,111..112,115,122,126..127)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197399"
     CDS             1..619
                     /gene="HDAC9"
                     /coded_by="XM_041466343.1:549..2408"
                     /db_xref="GeneID:121352927"
ORIGIN      
        1 mlqtiyeses cfssdgvsgr eqllaqqrmh smissvdvks evpvglepis pldlrtdlrm
       61 mvpmvdpimr ekqlqqelll iqqqqqiqkq lliaefqkqh enltrqhqaq lqehiklqqe
      121 llaikqqqel lekeqkleqq rqeqelerhr reqqlpplrg kergrerava stevkqklqe
      181 fllsksatkd spangknhsm srhpklwaah htsldqsspp lsgasppyky tlpgaqdakd
      241 dfplrktase pnlkvrsrlk qkvterrssp llrrkdgnvs sfkkrlfevt essvsssspg
      301 sgpsspsngp tssttendts vlssniqaer lvsqqrlliq desvnllsly tspslpnitl
      361 glpaiqpqis astsfkekqk getpplrqgv alagqyggni apssthphia legkpnsshq
      421 allqhlllke qmrqqkllvt gavplhpqsp laakervspg iraahklprh rplnrtqsap
      481 lpqstlaqlv iqqqhqqfle kqkqyqqqih mnkmlsksie qlkqpgshle eaeeelhgdh
      541 smqeerapas sasiraesss agvderigqq vgavkvkeep ldsdedvqtq qmesgeqaaf
      601 mqqvigkdla pgfvikvii
//
LOCUS       XP_041322278             616 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 9 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322278
VERSION     XP_041322278.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466344.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..616
                     /product="histone deacetylase 9 isoform X4"
                     /calculated_mol_wt=68680
     Region          66..152
                     /region_name="ClassIIa_HDAC_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of various
                     Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9);
                     cl25407"
                     /db_xref="CDD:421006"
     Site            order(67..68,70..71,74,78,81..82,85..86,88..89,92..93,
                     95..96,99..101,103..105,107..108,110..112,114..115,
                     118..119,122..124)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:197397"
     Site            order(67..68,70..71,74,78,81,85,88,92..93,95..96,99..100,
                     103,107,110,114,118,122)
                     /site_type="other"
                     /note="dimer interface A, C [polypeptide binding]"
                     /db_xref="CDD:197397"
     Site            order(78,82,86,89,93,96,100..101,104..105,108,112,115)
                     /site_type="other"
                     /note="dimer interface A, D [polypeptide binding]"
                     /db_xref="CDD:197397"
     Site            order(96,100,111..112,115,119,123..124)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197397"
     CDS             1..616
                     /gene="HDAC9"
                     /coded_by="XM_041466344.1:562..2412"
                     /db_xref="GeneID:121352927"
ORIGIN      
        1 mlqtiyeses cfssdgvsgr eqllaqqrmh smissvdvks evpvglepis pldlrtdlrm
       61 mvpmvdpimr ekqlqqelll iqqqqqiqkq lliaefqkqh enltrqhqaq lqehikella
      121 ikqqqellek eqkleqqrqe qelerhrreq qlpplrgker greravaste vkqklqefll
      181 sksatkdspa ngknhsmsrh pklwaahhts ldqsspplsg asppykytlp gaqdakddfp
      241 lrktasepnl kvrsrlkqkv terrsspllr rkdgnvssfk krlfevtess vsssspgsgp
      301 sspsngptss ttendtsvls sniqaerlvs qqrlliqdes vnllslytsp slpnitlglp
      361 aiqpqisast sfkekqkget pplrqgvala gqyggniaps sthphialeg kpnsshqall
      421 qhlllkeqmr qqkllvtgav plhpqsplaa kervspgira ahklprhrpl nrtqsaplpq
      481 stlaqlviqq qhqqflekqk qyqqqihmnk mlsksieqlk qpgshleeae eelhgdhsmq
      541 eerapassas iraesssagv derigqqvga vkvkeeplds dedvqtqqme sgeqaafmqq
      601 vigkdlapgf vikvii
//
LOCUS       XP_041322279             613 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 9 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322279
VERSION     XP_041322279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..613
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..613
                     /product="histone deacetylase 9 isoform X5"
                     /calculated_mol_wt=68312
     Region          58..147
                     /region_name="ClassIIa_HDAC9_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC9,
                     a Class IIa histone deacetylase; cd10163"
                     /db_xref="CDD:197399"
     Site            order(59..60,62..63,66,70,73,77,80,84..85,87..88,91..92,
                     95,99,102,106,113,117)
                     /site_type="other"
                     /note="dimer interface A, C [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(62..63,66,70,73..74,77..78,80..81,84..85,87..88,
                     91..93,95..97,99..100,102..104,106..107,113..114,117..119)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(70,74,78,81,85,88,92..93,96..97,100,104,107)
                     /site_type="other"
                     /note="dimer interface A, D [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(88,92,103..104,107,114,118..119)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197399"
     CDS             1..613
                     /gene="HDAC9"
                     /coded_by="XM_041466345.1:242..2083"
                     /db_xref="GeneID:121352927"
ORIGIN      
        1 mssttpdgvs greqllaqqr mhsmissvdv ksevpvglep ispldlrtdl rmmvpmvdpi
       61 mrekqlqqel lliqqqqqiq kqlliaefqk qhenltrqhq aqlqehiklq qellaikqqq
      121 ellekeqkle qqrqeqeler hrreqqlppl rgkergrera vastevkqkl qefllsksat
      181 kdspangknh smsrhpklwy taahhtsldq sspplsgasp pykytlpgaq dakddfplrk
      241 tasepnlkvr srlkqkvter rsspllrrkd gnvssfkkrl fevtessvss sspgsgpssp
      301 sngptsstte ndtsvlssni qaerlvsqqr lliqdesvnl lslytspslp nitlglpaiq
      361 pqisastsfk ekqkgetppl rqgvalagqy ggniapssth phialegkpn sshqallqhl
      421 llkeqmrqqk llvtgavplh pqsplaaker vspgiraahk lprhrplnrt qsaplpqstl
      481 aqlviqqqhq qflekqkqyq qqihmnkmls ksieqlkqpg shleeaeeel hgdhsmqeer
      541 apassasira esssagvder igqqvgavkv keepldsded vqtqqmesge qaafmqqvig
      601 kdlapgfvik vii
//
LOCUS       XP_041322280            1091 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 9 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322280
VERSION     XP_041322280.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466346.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1091
                     /product="histone deacetylase 9 isoform X6"
                     /calculated_mol_wt=120473
     Region          58..147
                     /region_name="ClassIIa_HDAC9_Gln-rich-N"
                     /note="Glutamine-rich N-terminal helical domain of HDAC9,
                     a Class IIa histone deacetylase; cd10163"
                     /db_xref="CDD:197399"
     Site            order(59..60,62..63,66,70,73,77,80,84..85,87..88,91..92,
                     95,99,102,106,113,117)
                     /site_type="other"
                     /note="dimer interface A, C [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(62..63,66,70,73..74,77..78,80..81,84..85,87..88,
                     91..93,95..97,99..100,102..104,106..107,113..114,117..119)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(70,74,78,81,85,88,92..93,96..97,100,104,107)
                     /site_type="other"
                     /note="dimer interface A, D [polypeptide binding]"
                     /db_xref="CDD:197399"
     Site            order(88,92,103..104,107,114,118..119)
                     /site_type="other"
                     /note="dimer interface A, B [polypeptide binding]"
                     /db_xref="CDD:197399"
     Region          654..1032
                     /region_name="HDAC9"
                     /note="Histone deacetylase 9; cd10009"
                     /db_xref="CDD:212533"
     Site            order(805..806,814..815,843,845,937,977)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:212533"
     CDS             1..1091
                     /gene="HDAC9"
                     /coded_by="XM_041466346.1:288..3563"
                     /db_xref="GeneID:121352927"
ORIGIN      
        1 mssttpdgvs greqllaqqr mhsmissvdv ksevpvglep ispldlrtdl rmmvpmvdpi
       61 mrekqlqqel lliqqqqqiq kqlliaefqk qhenltrqhq aqlqehiklq qellaikqqq
      121 ellekeqkle qqrqeqeler hrreqqlppl rgkergrera vastevkqkl qefllsksat
      181 kdspangknh smsrhpklwy taahhtsldq sspplsgasp pykytlpgaq dakddfplrk
      241 tasepnlkvr srlkqkvter rsspllrrkd gnvssfkkrl fevtessvss sspgsgpssp
      301 sngptsstte ndtsvlssni qaerlvsqqr lliqdesvnl lslytspslp nitlglpaiq
      361 pqisastsfk ekqkgetppl rqgvalagqy ggniapssth phialegkpn sshqallqhl
      421 llkeqmrqqk llvtgavplh pqsplaaker vspgiraahk lprhrplnrt qsaplpqstl
      481 aqlviqqqhq qflekqkqyq qqihmnkmls ksieqlkqpg shleeaeeel hgdhsmqeer
      541 apassasira esssagvder igqqvgavkv keepldsded vqtqqmesge qaafmqqefl
      601 ahrhvhqlqi yqaqmatvgm agsdkhrpls rtpssptdst lphpdmdqps qhvyttgvvy
      661 dslmlkhqcm cgnyanhpeh agriqsiwsr lqetgllnkc erirgrkasl eeiqlvhseh
      721 hsllygtspl nrqkldprkl lgnvsqklfs llpcgglgvd sdtvwnelhs agaarmavgc
      781 vielaarvas relkngfavv rppghhaees tamgfcffns iaitakylrd klnigkiliv
      841 dldvhhgngt qqafyadpsi lyvslhryde gnffpgsgap nevgsgpgeg yniniawtgg
      901 ldppmgdvey ltafrtvimp aanefdpeiv lvsagfdave ghdpplggyk vtakcfghlt
      961 kqllkladgr vvlalegghd ltaicdasea cinallgnel eplpedivhq ipnmnaiasl
     1021 kktteiqsky wksvepysvp vdcalaesqk qereetetvs amaslsvdve qcipqegsra
     1081 agepmeeepa l
//
LOCUS       XP_041322281             778 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-CoA dehydrogenase family member 11 [Pyrgilauda ruficollis].
ACCESSION   XP_041322281
VERSION     XP_041322281.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466347.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..778
                     /product="acyl-CoA dehydrogenase family member 11"
                     /calculated_mol_wt=87146
     Region          10..774
                     /region_name="PLN02876"
                     /note="acyl-CoA dehydrogenase"
                     /db_xref="CDD:215473"
     CDS             1..778
                     /gene="ACAD11"
                     /coded_by="XM_041466347.1:209..2545"
                     /db_xref="GeneID:121352928"
ORIGIN      
        1 maeepgtsev rrqhrfdqgs lerylssrlp gfprqppgal avrqyssgqs nptfylqkgg
       61 qafvlrkkph gpllpgahkv dreyrvqkal fsagfpvpep llycndisii gtefyvmqhv
      121 qgrifrdisl pevgpaersa lylamietla llhsfdlqsl glqgygrgpg yckrqvstwk
      181 kqydaaahtd ipamnklaew lannlppddn eetlihgdfr idniifhpte arvlavldwe
      241 lsttghplad layatqfyfw ptsikdlgqg silgfkdtie tpsfeelvsi ycrcrrista
      301 lpslnfflal syfkmagiaq gvyarylign asaenshefa klveplaerg lelskrssfs
      361 stqnsisgel fhqsrkgqei llkvkqfmkq hiypaekeii kyyieqrnae dkwkkpplle
      421 rlkelakaeg lwnlflpdvs glsqldyali aeetgrclia pevfnchapd tgnmevlhmy
      481 gseeqkkewl epllegkiss cfcmtepdva ssdatnmqct ierdgnsyvi ngkkwwssga
      541 gnpnckvaiv mgktknssas rykqhsmiiv pmdtpglkli rplsvfgymd eihgghfeih
      601 fndvrvpvsn iilgegrgfe iaqgrlgpgr ihhcmrslga aeaaleilcq raaqretfgk
      661 klyqhevvah wiaecrlsie qarlltlqta rkidmlgnrr arrevamtkv vvpravlkvv
      721 dcaiqvcgga gvsqdfplaf mfasirtlrl adgpdevhls tiarwelleq skkltaki
//
LOCUS       XP_041322282             353 aa            linear   VRT 06-MAY-2021
DEFINITION  atypical chemokine receptor 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322282
VERSION     XP_041322282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="atypical chemokine receptor 4"
                     /calculated_mol_wt=40421
     Region          40..315
                     /region_name="7tmA_ACKR4_CCR11"
                     /note="atypical chemokine receptor 4, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15176"
                     /db_xref="CDD:320304"
     Region          40..67
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320304"
     Site            order(46,95,98,114,117..118,185..190,198,201..202,257,264,
                     267,279,283,286..287,290)
                     /site_type="other"
                     /note="putative chemokine binding site [polypeptide
                     binding]"
                     /db_xref="CDD:320304"
     Region          74..99
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320304"
     Region          110..140
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320304"
     Region          150..172
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320304"
     Region          198..227
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320304"
     Region          234..264
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320304"
     Region          283..308
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320304"
     CDS             1..353
                     /gene="ACKR4"
                     /coded_by="XM_041466348.1:140..1201"
                     /db_xref="GeneID:121352929"
ORIGIN      
        1 mnnstdywie deeddlnpli dyntyellce ksdvrnfrkl flpvfytlaf tvgvagnslv
       61 vaiyayckkp ktktdvyimh laiadllllf tlpfwaanav qgwelgnpmc kltsslytmn
      121 fsssmlflac isvdryrats esqgrrrvgk hcsvtcicvw laatflsipe lifnqvkkhn
      181 erneclpifp mnmetllkst iqileiilef llpflvmlic ysataraifr sanvkksrpf
      241 kvllavvatf ivtqlpyniv klwraldiiy mlvtdchtsk tmdvalqvtk sialfhacln
      301 pllyaflgas fkmhimkiak nygywrrqqq ngrpeeismn yedpteetis fti
//
LOCUS       XP_041322283             536 aa            linear   VRT 06-MAY-2021
DEFINITION  upstream-binding protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322283
VERSION     XP_041322283.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466349.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="upstream-binding protein 1 isoform X1"
                     /calculated_mol_wt=60246
     Region          49..254
                     /region_name="CP2"
                     /note="CP2 transcription factor; pfam04516"
                     /db_xref="CDD:461338"
     Region          369..435
                     /region_name="SAM_CP2-like"
                     /note="SAM domain of CP2-like transcription factors;
                     cd09537"
                     /db_xref="CDD:188936"
     CDS             1..536
                     /gene="UBP1"
                     /coded_by="XM_041466349.1:548..2158"
                     /db_xref="GeneID:121352930"
ORIGIN      
        1 mawvlkmdev iesglvhdfd aslsgigqel gagaysmsdv lalpifkqed sslpqenetk
       61 hppfqyvmca atspavklyd etltylnqgq syeirmldnr kagdipeing klvksiirvv
      121 fhdrrlqyte hqqlegwkwn rpgdrlldld ipmsvgvidi ktnpsqlnav eflwdptkct
      181 safiqvhcis teftprkhgg ekgvpfriqv dtfkqtenge ytdhlhsasc qikvfkpkga
      241 drkqktdrek mekrtaheke kyqpsydttv ltemrlepii edaveheqkk sskrtlpady
      301 gdslakrgsc spwpdtpttf vnnsptpapt ftsaqhntys vpdsnssspn hqgdgtsqgs
      361 gdqlhpsati qetqqwllkn rfsaytrlfs nfsgadllkl tredlvqicg padgirlyna
      421 lksrsvrprl tiyvcqeplr siqlerqdag sgdsngaiyv yhaiyleema asevtrklal
      481 afniplhqin qvyrqgptgi hilvsdqmvq nfqdescflf ttikaengeg fhiilk
//
LOCUS       XP_041322285             535 aa            linear   VRT 06-MAY-2021
DEFINITION  upstream-binding protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322285
VERSION     XP_041322285.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466351.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..535
                     /product="upstream-binding protein 1 isoform X2"
                     /calculated_mol_wt=60118
     Region          49..254
                     /region_name="CP2"
                     /note="CP2 transcription factor; pfam04516"
                     /db_xref="CDD:461338"
     Region          368..434
                     /region_name="SAM_CP2-like"
                     /note="SAM domain of CP2-like transcription factors;
                     cd09537"
                     /db_xref="CDD:188936"
     CDS             1..535
                     /gene="UBP1"
                     /coded_by="XM_041466351.1:548..2155"
                     /db_xref="GeneID:121352930"
ORIGIN      
        1 mawvlkmdev iesglvhdfd aslsgigqel gagaysmsdv lalpifkqed sslpqenetk
       61 hppfqyvmca atspavklyd etltylnqgq syeirmldnr kagdipeing klvksiirvv
      121 fhdrrlqyte hqqlegwkwn rpgdrlldld ipmsvgvidi ktnpsqlnav eflwdptkct
      181 safiqvhcis teftprkhgg ekgvpfriqv dtfkqtenge ytdhlhsasc qikvfkpkga
      241 drkqktdrek mekrtaheke kyqpsydttv ltemrlepii edaveheqkk sskrtlpady
      301 gdslakrgsc spwpdtpttf vnnsptpapt ftsaqhntys vpdsnssspn hqgdgtsqgs
      361 gdlhpsatiq etqqwllknr fsaytrlfsn fsgadllklt redlvqicgp adgirlynal
      421 ksrsvrprlt iyvcqeplrs iqlerqdags gdsngaiyvy haiyleemaa sevtrklala
      481 fniplhqinq vyrqgptgih ilvsdqmvqn fqdescflft tikaengegf hiilk
//
LOCUS       XP_041322286             500 aa            linear   VRT 06-MAY-2021
DEFINITION  upstream-binding protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322286
VERSION     XP_041322286.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466352.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..500
                     /product="upstream-binding protein 1 isoform X3"
                     /calculated_mol_wt=56208
     Region          49..254
                     /region_name="CP2"
                     /note="CP2 transcription factor; pfam04516"
                     /db_xref="CDD:461338"
     Region          333..399
                     /region_name="SAM_CP2-like"
                     /note="SAM domain of CP2-like transcription factors;
                     cd09537"
                     /db_xref="CDD:188936"
     CDS             1..500
                     /gene="UBP1"
                     /coded_by="XM_041466352.1:548..2050"
                     /db_xref="GeneID:121352930"
ORIGIN      
        1 mawvlkmdev iesglvhdfd aslsgigqel gagaysmsdv lalpifkqed sslpqenetk
       61 hppfqyvmca atspavklyd etltylnqgq syeirmldnr kagdipeing klvksiirvv
      121 fhdrrlqyte hqqlegwkwn rpgdrlldld ipmsvgvidi ktnpsqlnav eflwdptkct
      181 safiqvhcis teftprkhgg ekgvpfriqv dtfkqtenge ytdhlhsasc qikvfkpkga
      241 drkqktdrek mekrtaheke kyqpsydttv ltecspwpdt pttfvnnspt paptftsaqh
      301 ntysvpdsns sspnhqgdgt sqgsgdqlhp satiqetqqw llknrfsayt rlfsnfsgad
      361 llkltredlv qicgpadgir lynalksrsv rprltiyvcq eplrsiqler qdagsgdsng
      421 aiyvyhaiyl eemaasevtr klalafnipl hqinqvyrqg ptgihilvsd qmvqnfqdes
      481 cflfttikae ngegfhiilk
//
LOCUS       XP_041322287             649 aa            linear   VRT 06-MAY-2021
DEFINITION  protein disulfide-isomerase A4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322287
VERSION     XP_041322287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466353.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..649
                     /product="protein disulfide-isomerase A4"
                     /calculated_mol_wt=73138
     Region          71..172
                     /region_name="pdi_dom"
                     /note="protein disulfide-isomerase domain; TIGR01126"
                     /db_xref="CDD:273454"
     Site            order(95,98)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:239259"
     Region          181..644
                     /region_name="ER_PDI_fam"
                     /note="protein disulfide isomerase, eukaryotic; TIGR01130"
                     /db_xref="CDD:273457"
     CDS             1..649
                     /gene="PDIA4"
                     /coded_by="XM_041466353.1:53..2002"
                     /db_xref="GeneID:121352931"
ORIGIN      
        1 mrmrlmwvlv lllglaqial largaaaqee dgdgesvtke addegdddde eeddedddds
       61 vvkeengvlv lndanfdtft adkdtvllef yapwcghckq fapeyekiak tlkendppip
      121 vakidataat slssrfdvsg yptikilkkg qavdydgsrt edaivakvke vsdpnwtppp
      181 eatlvlthdn fdevvndadi ilvefyapwc ghckrlapey ekaaqelskr tppiplakvd
      241 ataetelakk fdvtgyptlk ifrkgkpydy sgprekygiv dymieqagpp skqiqatkqv
      301 qeflrdgddv iiigvfsgen dktyqlyqea anglredykf hhtfsneiak llkvspgklv
      361 vmqpekfqsk hepkmhvlnl kdstdgseik ehvlkhalpl vghrkpsnda kryskrplvv
      421 vyysvdfsfd yrvatqywrs kvlevakdfp eyvfavsdee dysseikdlg llesgedvna
      481 aildeggkky amepeefdsd vlrqfvvafk kgklkpivks qpvpknnkgp vkvvvgktfd
      541 tivmdpkndv liefyapwcg hckklepvyn elgkkyknek nliiakmdat andvtndryk
      601 vegfptiyfa pkdkknnpik feggdrdleh lskfieehat klsrtkeel
//
LOCUS       XP_041322288             515 aa            linear   VRT 06-MAY-2021
DEFINITION  hyccin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322288
VERSION     XP_041322288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="hyccin isoform X1"
                     /calculated_mol_wt=56991
     Region          22..330
                     /region_name="Hyccin"
                     /note="pfam09790"
                     /db_xref="CDD:462903"
     CDS             1..515
                     /gene="FAM126A"
                     /coded_by="XM_041466354.1:90..1637"
                     /db_xref="GeneID:121352932"
ORIGIN      
        1 mlavdtgvve ewlsefktlp easissyass lkdktaliss lykviqepqs ellepvchql
       61 fefyrsgeeq llrftlqflp elmwcylavs asrdlqssgc iealllgvyn leivdkeghn
      121 kvlsftipsl skpsvyheps sigsmalteg alsqhglsrv vysgphpqre mltaqnrfev
      181 ltflllcyna alsympamsl qslcqissri cvcgyprqqv rkykgvnsri pvssefmvql
      241 ltgiyyafyn gewdlarkam ddvlyraqle lypepllvan aikaslpqga mksskegtrc
      301 iqveitptss risrnavtsm sirghrwkrh dnsdlaieee lievsetdeg fysratsgts
      361 qsalsnsstm ssknllgksq rrsggskpgg kekegetcre hlsrkqtqra msenlelvsl
      421 krltlttsqs lpkpgshsla rttttvfsks feqvsgvpvp nnrggvsgte anrfsacslq
      481 eekliygter tdlpilskqp nqqrppsisi tlstd
//
LOCUS       XP_041322289             515 aa            linear   VRT 06-MAY-2021
DEFINITION  hyccin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322289
VERSION     XP_041322289.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466355.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="hyccin isoform X1"
                     /calculated_mol_wt=56991
     Region          22..330
                     /region_name="Hyccin"
                     /note="pfam09790"
                     /db_xref="CDD:462903"
     CDS             1..515
                     /gene="FAM126A"
                     /coded_by="XM_041466355.1:55..1602"
                     /db_xref="GeneID:121352932"
ORIGIN      
        1 mlavdtgvve ewlsefktlp easissyass lkdktaliss lykviqepqs ellepvchql
       61 fefyrsgeeq llrftlqflp elmwcylavs asrdlqssgc iealllgvyn leivdkeghn
      121 kvlsftipsl skpsvyheps sigsmalteg alsqhglsrv vysgphpqre mltaqnrfev
      181 ltflllcyna alsympamsl qslcqissri cvcgyprqqv rkykgvnsri pvssefmvql
      241 ltgiyyafyn gewdlarkam ddvlyraqle lypepllvan aikaslpqga mksskegtrc
      301 iqveitptss risrnavtsm sirghrwkrh dnsdlaieee lievsetdeg fysratsgts
      361 qsalsnsstm ssknllgksq rrsggskpgg kekegetcre hlsrkqtqra msenlelvsl
      421 krltlttsqs lpkpgshsla rttttvfsks feqvsgvpvp nnrggvsgte anrfsacslq
      481 eekliygter tdlpilskqp nqqrppsisi tlstd
//
LOCUS       XP_041322290             419 aa            linear   VRT 06-MAY-2021
DEFINITION  hyccin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322290
VERSION     XP_041322290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466356.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="hyccin isoform X2"
                     /calculated_mol_wt=46724
     Region          22..330
                     /region_name="Hyccin"
                     /note="pfam09790"
                     /db_xref="CDD:462903"
     CDS             1..419
                     /gene="FAM126A"
                     /coded_by="XM_041466356.1:90..1349"
                     /db_xref="GeneID:121352932"
ORIGIN      
        1 mlavdtgvve ewlsefktlp easissyass lkdktaliss lykviqepqs ellepvchql
       61 fefyrsgeeq llrftlqflp elmwcylavs asrdlqssgc iealllgvyn leivdkeghn
      121 kvlsftipsl skpsvyheps sigsmalteg alsqhglsrv vysgphpqre mltaqnrfev
      181 ltflllcyna alsympamsl qslcqissri cvcgyprqqv rkykgvnsri pvssefmvql
      241 ltgiyyafyn gewdlarkam ddvlyraqle lypepllvan aikaslpqga mksskegtrc
      301 iqveitptss risrnavtsm sirghrwkrh eqpengndat elgnfiipei svtsvagert
      361 gngeksrala endvqhlqgv qetateprtd skgmpeirrq ksvrkmmedg inssgrvqf
//
LOCUS       XP_041322291             251 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-10 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322291
VERSION     XP_041322291.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466357.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..251
                     /product="sorting nexin-10 isoform X1"
                     /calculated_mol_wt=28397
     Region          62..174
                     /region_name="PX_SNX10"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 10; cd06898"
                     /db_xref="CDD:132808"
     Site            order(103..105,128..129,144)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132808"
     CDS             1..251
                     /gene="SNX10"
                     /coded_by="XM_041466357.1:63..818"
                     /db_xref="GeneID:121352933"
ORIGIN      
        1 mhlvlnkrkk vcwevtaale kigtqgsrnl gktktcdikd gtvglkvcsi ylptylcmef
       61 vtvlvrdpri qkedswhsyi dyeifihtns icftrktscv rrryrefvwl rqrlqsnavl
      121 iqlpelpskt pffnmnnpnh vdhrrqglqe flekilqdal llsdsrlhlf lqtqlspedm
      181 eacvsgqtkf svadailsfa slnrrfpied eeekkgknda dsdsessssg lgpsddsisc
      241 gckaspasee s
//
LOCUS       XP_041322292             218 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-10 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322292
VERSION     XP_041322292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="sorting nexin-10 isoform X2"
                     /calculated_mol_wt=24836
     Region          29..141
                     /region_name="PX_SNX10"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 10; cd06898"
                     /db_xref="CDD:132808"
     Site            order(70..72,95..96,111)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132808"
     CDS             1..218
                     /gene="SNX10"
                     /coded_by="XM_041466358.1:56..712"
                     /db_xref="GeneID:121352933"
ORIGIN      
        1 mhlvlnkrkk vcwevtaale kigtqefvtv lvrdpriqke dswhsyidye ifihtnsicf
       61 trktscvrrr yrefvwlrqr lqsnavliql pelpsktpff nmnnpnhvdh rrqglqefle
      121 kilqdallls dsrlhlflqt qlspedmeac vsgqtkfsva dailsfasln rrfpiedeee
      181 kkgkndadsd sessssglgp sddsiscgck aspasees
//
LOCUS       XP_041322293             201 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-10 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322293
VERSION     XP_041322293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466359.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="sorting nexin-10 isoform X3"
                     /calculated_mol_wt=22938
     Region          12..124
                     /region_name="PX_SNX10"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 10; cd06898"
                     /db_xref="CDD:132808"
     Site            order(53..55,78..79,94)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132808"
     CDS             1..201
                     /gene="SNX10"
                     /coded_by="XM_041466359.1:127..732"
                     /db_xref="GeneID:121352933"
ORIGIN      
        1 mtpkhekqef vtvlvrdpri qkedswhsyi dyeifihtns icftrktscv rrryrefvwl
       61 rqrlqsnavl iqlpelpskt pffnmnnpnh vdhrrqglqe flekilqdal llsdsrlhlf
      121 lqtqlspedm eacvsgqtkf svadailsfa slnrrfpied eeekkgknda dsdsessssg
      181 lgpsddsisc gckaspasee s
//
LOCUS       XP_041322294             201 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-10 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322294
VERSION     XP_041322294.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466360.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="sorting nexin-10 isoform X3"
                     /calculated_mol_wt=22938
     Region          12..124
                     /region_name="PX_SNX10"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 10; cd06898"
                     /db_xref="CDD:132808"
     Site            order(53..55,78..79,94)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132808"
     CDS             1..201
                     /gene="SNX10"
                     /coded_by="XM_041466360.1:338..943"
                     /db_xref="GeneID:121352933"
ORIGIN      
        1 mtpkhekqef vtvlvrdpri qkedswhsyi dyeifihtns icftrktscv rrryrefvwl
       61 rqrlqsnavl iqlpelpskt pffnmnnpnh vdhrrqglqe flekilqdal llsdsrlhlf
      121 lqtqlspedm eacvsgqtkf svadailsfa slnrrfpied eeekkgknda dsdsessssg
      181 lgpsddsisc gckaspasee s
//
LOCUS       XP_041322295             194 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-10 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322295
VERSION     XP_041322295.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466361.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="sorting nexin-10 isoform X4"
                     /calculated_mol_wt=22089
     Region          5..117
                     /region_name="PX_SNX10"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 10; cd06898"
                     /db_xref="CDD:132808"
     Site            order(46..48,71..72,87)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132808"
     CDS             1..194
                     /gene="SNX10"
                     /coded_by="XM_041466361.1:103..687"
                     /db_xref="GeneID:121352933"
ORIGIN      
        1 mefvtvlvrd priqkedswh syidyeifih tnsicftrkt scvrrryref vwlrqrlqsn
       61 avliqlpelp sktpffnmnn pnhvdhrrqg lqeflekilq dalllsdsrl hlflqtqlsp
      121 edmeacvsgq tkfsvadail sfaslnrrfp iedeeekkgk ndadsdsess ssglgpsdds
      181 iscgckaspa sees
//
LOCUS       XP_041322296             878 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death 6-interacting protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322296
VERSION     XP_041322296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..878
                     /product="programmed cell death 6-interacting protein
                     isoform X1"
                     /calculated_mol_wt=96976
     Region          2..347
                     /region_name="BRO1_Alix"
                     /note="Protein-interacting, N-terminal, Bro1-like domain
                     of mammalian Alix and related domains; cd09240"
                     /db_xref="CDD:185763"
     Site            order(130,133,146,149..150,198,201..202,211,214..215,339,
                     341,343,345)
                     /site_type="other"
                     /note="putative ESCRT-III binding site"
                     /db_xref="CDD:185763"
     Region          364..702
                     /region_name="V_Alix"
                     /note="Middle V-domain of mammalian Alix and related
                     domains are dimerization and protein interaction modules;
                     cd09235"
                     /db_xref="CDD:185748"
     Site            order(444,502,506,509..510,673,676..677,680,683)
                     /site_type="other"
                     /note="YPXnL-motif binding site"
                     /db_xref="CDD:185748"
     Site            642..648
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:185748"
     CDS             1..878
                     /gene="LOC121352935"
                     /coded_by="XM_041466362.1:128..2764"
                     /db_xref="GeneID:121352935"
ORIGIN      
        1 mtnfisvqlk kasevdlakp lckfiqqsyp gaeaqaehcr aaeelsrlrk salgrpldkh
       61 esaletllry ydqlcsiepk fpfsenqvcv tftwkdafdk gslfggsakl alaslgyekt
      121 cvlfncgala sqiaaeqnld ndeglkaaak hyqfasgafq hikdtvlsal nreptvdisp
      181 dtvgtlslim laqaqevffl katrdkmkda iiaklanqaa dyygdaykqc qykdtlpkyf
      241 yfqevfpvla akhcimqana eyhqsilakq qkkfgeeigr lqhaadlvkt vasrydeyin
      301 vkdlvdkinr alaaakkdnd fiyhdrvpdl kdlepigkas lvkstpvvvp lsqkftdlfe
      361 kmvplqvqqs vsvynqrkad lvnrsiaqmr eatnlangvl aslnlpaaie dvsgdtvpqs
      421 ilnksksvie qggiqtvdql ikdlpellqr nkeildeslr lldeeeatdn dlrtkfkerw
      481 qrtpsnelyk plraeganyh nilnkamqad gqvkeryqth rdtiallckp eaelnaaips
      541 anpaktlqgn evvnvlrtll asldevkkdr eqlendlksv nfdmtskflt alaqdgaine
      601 eaisvteldr iygsytqkvq eslkkqeell kniqnahqdf skmkqsnnes nlreevlknl
      661 avandnfvel vanlkegtkf ynelteillk fqnkcsdiif arkterdell kdlqqsiare
      721 psapsiplpt yqttpaagsk paaspaptpa prtmvgtkpq pparppppvi saasssssal
      781 apsgaaaapa avpaptpgas apaastapsq aqgppyptyp gypgycqmpm pmgynpymyg
      841 qynlpyapsp vyqtpgqppy pppqqpgypf pqqpyyqq
//
LOCUS       XP_041322297             873 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death 6-interacting protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322297
VERSION     XP_041322297.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466363.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..873
                     /product="programmed cell death 6-interacting protein
                     isoform X2"
                     /calculated_mol_wt=96227
     Region          2..342
                     /region_name="BRO1_Alix"
                     /note="Protein-interacting, N-terminal, Bro1-like domain
                     of mammalian Alix and related domains; cd09240"
                     /db_xref="CDD:185763"
     Site            order(130,133,146,149..150,198,201..202,211,214..215,334,
                     336,338,340)
                     /site_type="other"
                     /note="putative ESCRT-III binding site"
                     /db_xref="CDD:185763"
     Region          359..697
                     /region_name="V_Alix"
                     /note="Middle V-domain of mammalian Alix and related
                     domains are dimerization and protein interaction modules;
                     cd09235"
                     /db_xref="CDD:185748"
     Site            order(439,497,501,504..505,668,671..672,675,678)
                     /site_type="other"
                     /note="YPXnL-motif binding site"
                     /db_xref="CDD:185748"
     Site            637..643
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:185748"
     CDS             1..873
                     /gene="LOC121352935"
                     /coded_by="XM_041466363.1:128..2749"
                     /db_xref="GeneID:121352935"
ORIGIN      
        1 mtnfisvqlk kasevdlakp lckfiqqsyp gaeaqaehcr aaeelsrlrk salgrpldkh
       61 esaletllry ydqlcsiepk fpfsenqvcv tftwkdafdk gslfggsakl alaslgyekt
      121 cvlfncgala sqiaaeqnld ndeglkaaak hyqfasgafq hikdtvlsal nreptvdisp
      181 dtvgtlslim laqaqevffl katrdkmkda iiaklanqaa dyygdaykqc qykdtlpkev
      241 fpvlaakhci mqanaeyhqs ilakqqkkfg eeigrlqhaa dlvktvasry deyinvkdlv
      301 dkinralaaa kkdndfiyhd rvpdlkdlep igkaslvkst pvvvplsqkf tdlfekmvpl
      361 qvqqsvsvyn qrkadlvnrs iaqmreatnl angvlaslnl paaiedvsgd tvpqsilnks
      421 ksvieqggiq tvdqlikdlp ellqrnkeil deslrlldee eatdndlrtk fkerwqrtps
      481 nelykplrae ganyhnilnk amqadgqvke ryqthrdtia llckpeaeln aaipsanpak
      541 tlqgnevvnv lrtllaslde vkkdreqlen dlksvnfdmt skfltalaqd gaineeaisv
      601 teldriygsy tqkvqeslkk qeellkniqn ahqdfskmkq snnesnlree vlknlavand
      661 nfvelvanlk egtkfynelt eillkfqnkc sdiifarkte rdellkdlqq siarepsaps
      721 iplptyqttp aagskpaasp aptpaprtmv gtkpqpparp pppvisaass sssalapsga
      781 aaapaavpap tpgasapaas tapsqaqgpp yptypgypgy cqmpmpmgyn pymygqynlp
      841 yapspvyqtp gqppypppqq pgypfpqqpy yqq
//
LOCUS       XP_041322300             744 aa            linear   VRT 06-MAY-2021
DEFINITION  CCR4-NOT transcription complex subunit 10 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322300
VERSION     XP_041322300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..744
                     /product="CCR4-NOT transcription complex subunit 10
                     isoform X1"
                     /calculated_mol_wt=82124
     Region          216..244
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          248..>404
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          249..280
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          296..321
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(297..298,301..302,304,356,359..360,363..364,
                     366..367,390,393..394,397..398,401)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          354..384
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..744
                     /gene="CNOT10"
                     /coded_by="XM_041466366.1:219..2453"
                     /db_xref="GeneID:121352936"
ORIGIN      
        1 maadkaadqg tekhegagts gitdqekels ssalqafqag nydaclqhln tlqdinkddy
       61 kitlntavae fcksnqtttd nlrqtlnqlk nqvhsvveem dglddvensm lyynqavily
      121 hlrqyteais vgeklyqfie pfeekfaqav cfllvdlyll tyqaekalhl lvvlekmisq
      181 gnnnskngkn esgnntnkds snqkaesgal ievakskihq ykvrayiqmk slkackreik
      241 svmntagnsa pslflksnfe ylrgnyrkav kllnsaniae hpgfmktgec lrcmfwnnlg
      301 cihfamgkhn lgifyfkkal qendnacaql gtgssdpgkk fsgrpmctll tnkryellyn
      361 cgiqllhigr plaafeclie avqvyhsnpr lwlriaecci aankgtseqe tkglpskkgi
      421 vqsivgqgyh rkivlasqsi qnvvyndgqs saipvasmef aaiclrnall llpedqqepk
      481 qengsktnnq lggntentes seacsnkshe gdkfiaapps splkkqelen lrcsilacsa
      541 yvalalgdnl malnhadkll qqpklsgslk flghlyaaea lisldrisda ithlnpenvt
      601 dvslgissne qdqgsdkgen eamessgkqt pqcypssvts artmmlfnlg sayclrseyd
      661 karkclhqaa slihpkeipp eaillavyle lqngntqlal qiikrnqllp svktlsdmrk
      721 kpvfqpvhsi qpiqmpaftt vqrk
//
LOCUS       XP_041322301             743 aa            linear   VRT 06-MAY-2021
DEFINITION  CCR4-NOT transcription complex subunit 10 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322301
VERSION     XP_041322301.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466367.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..743
                     /product="CCR4-NOT transcription complex subunit 10
                     isoform X2"
                     /calculated_mol_wt=82010
     Region          216..244
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          248..>404
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          249..280
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          296..321
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(297..298,301..302,304,356,359..360,363..364,
                     366..367,390,393..394,397..398,401)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          354..384
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..743
                     /gene="CNOT10"
                     /coded_by="XM_041466367.1:219..2450"
                     /db_xref="GeneID:121352936"
ORIGIN      
        1 maadkaadqg tekhegagts gitdqekels ssalqafqag nydaclqhln tlqdinkddy
       61 kitlntavae fcksnqtttd nlrqtlnqlk nqvhsvveem dglddvensm lyynqavily
      121 hlrqyteais vgeklyqfie pfeekfaqav cfllvdlyll tyqaekalhl lvvlekmisq
      181 gnnnskngkn esgnntnkds snqkaesgal ievakskihq ykvrayiqmk slkackreik
      241 svmntagnsa pslflksnfe ylrgnyrkav kllnsaniae hpgfmktgec lrcmfwnnlg
      301 cihfamgkhn lgifyfkkal qendnacaql gtgssdpgkk fsgrpmctll tnkryellyn
      361 cgiqllhigr plaafeclie avqvyhsnpr lwlriaecci aankgtseqe tkglpskkgi
      421 vqsivgqgyh rkivlasqsi qnvvyndgqs saipvasmef aaiclrnall llpedqqepk
      481 qengsktnnq lggntentes seacsksheg dkfiaappss plkkqelenl rcsilacsay
      541 valalgdnlm alnhadkllq qpklsgslkf lghlyaaeal isldrisdai thlnpenvtd
      601 vslgissneq dqgsdkgene amessgkqtp qcypssvtsa rtmmlfnlgs ayclrseydk
      661 arkclhqaas lihpkeippe aillavylel qngntqlalq iikrnqllps vktlsdmrkk
      721 pvfqpvhsiq piqmpafttv qrk
//
LOCUS       XP_041322302             717 aa            linear   VRT 06-MAY-2021
DEFINITION  CCR4-NOT transcription complex subunit 10 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322302
VERSION     XP_041322302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466368.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..717
                     /product="CCR4-NOT transcription complex subunit 10
                     isoform X3"
                     /calculated_mol_wt=79177
     Region          216..244
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          248..>404
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          249..280
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          296..321
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(297..298,301..302,304,356,359..360,363..364,
                     366..367,390,393..394,397..398,401)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          354..384
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..717
                     /gene="CNOT10"
                     /coded_by="XM_041466368.1:219..2372"
                     /db_xref="GeneID:121352936"
ORIGIN      
        1 maadkaadqg tekhegagts gitdqekels ssalqafqag nydaclqhln tlqdinkddy
       61 kitlntavae fcksnqtttd nlrqtlnqlk nqvhsvveem dglddvensm lyynqavily
      121 hlrqyteais vgeklyqfie pfeekfaqav cfllvdlyll tyqaekalhl lvvlekmisq
      181 gnnnskngkn esgnntnkds snqkaesgal ievakskihq ykvrayiqmk slkackreik
      241 svmntagnsa pslflksnfe ylrgnyrkav kllnsaniae hpgfmktgec lrcmfwnnlg
      301 cihfamgkhn lgifyfkkal qendnacaql gtgssdpgkk fsgrpmctll tnkryellyn
      361 cgiqllhigr plaafeclie avqvyhsnpr lwlriaecci aankgtseqe tkglpskkgi
      421 vqsivgqgyh rkivlasqsi qnvvyndgqs saipvasmef aaiclrnall llpedqqepk
      481 qengsktnnq lggntentes seacrcsila csayvalalg dnlmalnhad kllqqpklsg
      541 slkflghlya aealisldri sdaithlnpe nvtdvslgis sneqdqgsdk geneamessg
      601 kqtpqcypss vtsartmmlf nlgsayclrs eydkarkclh qaaslihpke ippeaillav
      661 ylelqngntq lalqiikrnq llpsvktlsd mrkkpvfqpv hsiqpiqmpa fttvqrk
//
LOCUS       XP_041322303             292 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA N(3)-methylcytidine methyltransferase METTL6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322303
VERSION     XP_041322303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..292
                     /product="tRNA N(3)-methylcytidine methyltransferase
                     METTL6"
                     /calculated_mol_wt=33925
     Region          102..201
                     /region_name="Methyltransf_25"
                     /note="Methyltransferase domain; pfam13649"
                     /db_xref="CDD:463945"
     CDS             1..292
                     /gene="METTL6"
                     /coded_by="XM_041466369.1:1729..2607"
                     /db_xref="GeneID:121352937"
ORIGIN      
        1 mfqekasanc lnivttsted gafqkkghsa rvlspeevek lakdwvlvse fkqlklekea
       61 qknwdlfykr nstnffkdrh wttrefqelk acrefadqkl tileagcgvg nclfplleed
      121 knifayacdf spraveyvkk nalysterck vfqcdltkdd lldnipadsv dvvtlifvls
      181 aihpdkmhlv lrniykvlkp gkcvlfrdyg lydhamlrfk sgsklgenfy vrqdgtrsyf
      241 ftaeflsqlf raegyeqvvn eyvqretvnr kedlrvprvf lqskfqkpfs et
//
LOCUS       XP_041322304             292 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA N(3)-methylcytidine methyltransferase METTL6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322304
VERSION     XP_041322304.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466370.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..292
                     /product="tRNA N(3)-methylcytidine methyltransferase
                     METTL6"
                     /calculated_mol_wt=33925
     Region          102..201
                     /region_name="Methyltransf_25"
                     /note="Methyltransferase domain; pfam13649"
                     /db_xref="CDD:463945"
     CDS             1..292
                     /gene="METTL6"
                     /coded_by="XM_041466370.1:239..1117"
                     /db_xref="GeneID:121352937"
ORIGIN      
        1 mfqekasanc lnivttsted gafqkkghsa rvlspeevek lakdwvlvse fkqlklekea
       61 qknwdlfykr nstnffkdrh wttrefqelk acrefadqkl tileagcgvg nclfplleed
      121 knifayacdf spraveyvkk nalysterck vfqcdltkdd lldnipadsv dvvtlifvls
      181 aihpdkmhlv lrniykvlkp gkcvlfrdyg lydhamlrfk sgsklgenfy vrqdgtrsyf
      241 ftaeflsqlf raegyeqvvn eyvqretvnr kedlrvprvf lqskfqkpfs et
//
LOCUS       XP_041322305             259 aa            linear   VRT 06-MAY-2021
DEFINITION  ELL-associated factor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322305
VERSION     XP_041322305.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466371.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="ELL-associated factor 1"
                     /calculated_mol_wt=27974
     Region          16..114
                     /region_name="EAF"
                     /note="RNA polymerase II transcription elongation factor;
                     pfam09816"
                     /db_xref="CDD:462913"
     CDS             1..259
                     /gene="EAF1"
                     /coded_by="XM_041466371.1:27..806"
                     /db_xref="GeneID:121352938"
ORIGIN      
        1 mngsanslld keehplqlge sferrpkasf htirydfkpa sidtscegdl qvgkgddvti
       61 tlphipgstp pmtvfkgnkr pyqkdcvlii nhdtgeyvle klsssiqvkk traegsskiq
      121 arieqqsara sqppsqfrap tkpaagpkts plkdnpspep qlddikrelr aeveiieqms
      181 sssgssssds esssgsedes sssegeepah vspsqpphqq ynnrnavang tsrpqgsnql
      241 mntlrndlql sesgsdsdd
//
LOCUS       XP_041322306             172 aa            linear   VRT 06-MAY-2021
DEFINITION  anterior gradient protein 2 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322306
VERSION     XP_041322306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="anterior gradient protein 2 homolog"
                     /calculated_mol_wt=19568
     Region          44..172
                     /region_name="AGR"
                     /note="Anterior Gradient (AGR) family; members of this
                     family are similar to secreted proteins encoded by the
                     cement gland-specific genes XAG-1 and XAG-2, expressed in
                     the anterior region of dorsal ectoderm of Xenopus. They
                     are implicated in the formation of...; cd02960"
                     /db_xref="CDD:239258"
     Site            order(78,81)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:239258"
     CDS             1..172
                     /gene="AGR2"
                     /coded_by="XM_041466372.1:57..575"
                     /db_xref="GeneID:121352939"
ORIGIN      
        1 meksyvsmfl lliviscala kdagkkdskd ttakpklpqt lsrgwgdqli wtqtyeealf
       61 rakhsqkplm iihhledcph sqalkkvfae hkdiqklaek fillnlvyet tdknlapdgq
      121 yvprvlfidp sltvraditg rysnrlyaye psdisllysn mqkalkllkt el
//
LOCUS       XP_041322307             353 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate dehydrogenase 1-like protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322307
VERSION     XP_041322307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="glycerol-3-phosphate dehydrogenase 1-like
                     protein"
                     /calculated_mol_wt=38423
     Region          9..346
                     /region_name="glycerol3P_DH"
                     /note="glycerol-3-phosphate dehydrogenase (NAD(+));
                     TIGR03376"
                     /db_xref="CDD:274551"
     CDS             1..353
                     /gene="GPD1L"
                     /coded_by="XM_041466373.1:68..1129"
                     /db_xref="GeneID:121352940"
ORIGIN      
        1 malsagplkv civgsgnwgs avakiignnv kklqkfaptv nmwvfeenin grklteiint
       61 dhenvkylpg cklpdnvvai pnlreavqda dllvfviphq yihkvcdeit gqvprkalgi
      121 tlikgidqgp eglklisdii rekmgidisv lmganianev aadkfcetti gckilengll
      181 fkellqtpnf ritvvddada velcgalknv vavgagfcdg lsygdntkaa virlglmemi
      241 afakvfcrgq vstatflesc giadlittcy ggrnrrvaea fvktgksiee lekemlngqk
      301 lqgpqtsaev yhllkqkgml dkfplftavy qicyegrpvq eiisclqnhp ehm
//
LOCUS       XP_041322308             968 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-13 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322308
VERSION     XP_041322308.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466374.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..968
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..968
                     /product="sorting nexin-13 isoform X1"
                     /calculated_mol_wt=112312
     Region          97..284
                     /region_name="PXA"
                     /note="PXA domain; cl02564"
                     /db_xref="CDD:470618"
     Region          377..511
                     /region_name="RGS_SNX13"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Sorting Nexin 13 (SNX13) protein; cd08719"
                     /db_xref="CDD:188674"
     Region          557..687
                     /region_name="PX_SNX13"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 13; cd06873"
                     /db_xref="CDD:132783"
     Site            order(612..614,639..640,653)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132783"
     Region          803..911
                     /region_name="Nexin_C"
                     /note="Sorting nexin C terminal; pfam08628"
                     /db_xref="CDD:462541"
     CDS             1..968
                     /gene="SNX13"
                     /coded_by="XM_041466374.1:113..3019"
                     /db_xref="GeneID:121352942"
ORIGIN      
        1 mltetslsiw gwgslglvlf lvtfgpfaif yfafyilcfv gggfvvtllf gksnsekyle
       61 qcehsflpct svgipkciee mkrearpiki drrltganii deplqqviqf slrdyvqywy
      121 ytlsddesfl leirqalqya lvqfsarske tdwqpyfttr lvddfgthlr vfrkaqqria
      181 ekgnqmkdqa eelvdtffev evemekevcr dlvctspkde egflrdlcev llyillppgd
      241 fqnkimryfv reilsrgill plinqlsdpd yinqyviwmi rdsncnyeaf mniiklsdni
      301 geleavkdka seelqylrsl dtagddinti knqinsllyv ikvcdsriqr lqsgkeidtv
      361 klaanfgklc tvpldhilvd nvalqffmdy mqqtggqahl ffwmtvegyr vtaqqqlevl
      421 qsrqkdgkhq tnqtkgllra aafgvyeqyl sekasprvni ddnlvaklae tlnhedptpe
      481 ifddiqrkvy elmlrderfy psfkqnvlyv rmlaeldmlk dpsfrgsddg egesfngspt
      541 gsinlslddl ssvptdetvq lhayisdtvy adcdpyavag vcndhgktya lyaitvhrrn
      601 anseemwkty rrysdfhdfh mriteqfenl anilklpgkk tfnnmdrefl ekrkkdlnay
      661 lqlllnpemm kaspalahyv ydflenkays kgkgdfarkm dtfvnplrns mrnvsnavks
      721 ipdslaegmt kmsdnmgkms erlgqdikqs ffkvpplmqk tysdpdhcrv aapiddnvdd
      781 niplrvmlll mdevfdlker nqwlrrnikn llqqliraty gdtinrkivd hvdwmtspeq
      841 vadavkrfrd afwpngilae svprrdkair mrtrvagktk llevmpdelk hiigaettrk
      901 gilrvfemfq hsqlnkrmvy vflerfletl fpqnkfpelf hklhsrskqm qrykqrlhst
      961 qapslqkr
//
LOCUS       XP_041322309             957 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-13 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322309
VERSION     XP_041322309.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466375.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..957
                     /product="sorting nexin-13 isoform X2"
                     /calculated_mol_wt=111144
     Region          97..284
                     /region_name="PXA"
                     /note="PXA domain; cl02564"
                     /db_xref="CDD:470618"
     Region          377..511
                     /region_name="RGS_SNX13"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Sorting Nexin 13 (SNX13) protein; cd08719"
                     /db_xref="CDD:188674"
     Region          557..676
                     /region_name="PX_SNX13"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 13; cd06873"
                     /db_xref="CDD:132783"
     Site            order(601..603,628..629,642)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132783"
     Region          792..900
                     /region_name="Nexin_C"
                     /note="Sorting nexin C terminal; pfam08628"
                     /db_xref="CDD:462541"
     CDS             1..957
                     /gene="SNX13"
                     /coded_by="XM_041466375.1:116..2989"
                     /db_xref="GeneID:121352942"
ORIGIN      
        1 mltetslsiw gwgslglvlf lvtfgpfaif yfafyilcfv gggfvvtllf gksnsekyle
       61 qcehsflpct svgipkciee mkrearpiki drrltganii deplqqviqf slrdyvqywy
      121 ytlsddesfl leirqalqya lvqfsarske tdwqpyfttr lvddfgthlr vfrkaqqria
      181 ekgnqmkdqa eelvdtffev evemekevcr dlvctspkde egflrdlcev llyillppgd
      241 fqnkimryfv reilsrgill plinqlsdpd yinqyviwmi rdsncnyeaf mniiklsdni
      301 geleavkdka seelqylrsl dtagddinti knqinsllyv ikvcdsriqr lqsgkeidtv
      361 klaanfgklc tvpldhilvd nvalqffmdy mqqtggqahl ffwmtvegyr vtaqqqlevl
      421 qsrqkdgkhq tnqtkgllra aafgvyeqyl sekasprvni ddnlvaklae tlnhedptpe
      481 ifddiqrkvy elmlrderfy psfkqnvlyv rmlaeldmlk dpsfrgsddg egesfngspt
      541 gsinlslddl ssvptdetvq lhayisdtgv cndhgktyal yaitvhrrna nseemwktyr
      601 rysdfhdfhm riteqfenla nilklpgkkt fnnmdrefle krkkdlnayl qlllnpemmk
      661 aspalahyvy dflenkaysk gkgdfarkmd tfvnplrnsm rnvsnavksi pdslaegmtk
      721 msdnmgkmse rlgqdikqsf fkvpplmqkt ysdpdhcrva apiddnvddn iplrvmlllm
      781 devfdlkern qwlrrniknl lqqliratyg dtinrkivdh vdwmtspeqv adavkrfrda
      841 fwpngilaes vprrdkairm rtrvagktkl levmpdelkh iigaettrkg ilrvfemfqh
      901 sqlnkrmvyv flerfletlf pqnkfpelfh klhsrskqmq rykqrlhstq apslqkr
//
LOCUS       XP_041322310             933 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-13 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322310
VERSION     XP_041322310.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466376.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..933
                     /product="sorting nexin-13 isoform X3"
                     /calculated_mol_wt=108355
     Region          97..284
                     /region_name="PXA"
                     /note="PXA domain; cl02564"
                     /db_xref="CDD:470618"
     Region          377..476
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     Region          522..652
                     /region_name="PX_SNX13"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 13; cd06873"
                     /db_xref="CDD:132783"
     Site            order(577..579,604..605,618)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132783"
     Region          768..876
                     /region_name="Nexin_C"
                     /note="Sorting nexin C terminal; pfam08628"
                     /db_xref="CDD:462541"
     CDS             1..933
                     /gene="SNX13"
                     /coded_by="XM_041466376.1:113..2914"
                     /db_xref="GeneID:121352942"
ORIGIN      
        1 mltetslsiw gwgslglvlf lvtfgpfaif yfafyilcfv gggfvvtllf gksnsekyle
       61 qcehsflpct svgipkciee mkrearpiki drrltganii deplqqviqf slrdyvqywy
      121 ytlsddesfl leirqalqya lvqfsarske tdwqpyfttr lvddfgthlr vfrkaqqria
      181 ekgnqmkdqa eelvdtffev evemekevcr dlvctspkde egflrdlcev llyillppgd
      241 fqnkimryfv reilsrgill plinqlsdpd yinqyviwmi rdsncnyeaf mniiklsdni
      301 geleavkdka seelqylrsl dtagddinti knqinsllyv ikvcdsriqr lqsgkeidtv
      361 klaanfgklc tvpldhilvd nvalqffmdy mqqtggqahl ffwmtvegyr vtaqqqlevl
      421 qsrqkdgkhq tnqtkgllra aafgvyeqyl sekvyelmlr derfypsfkq nvlyvrmlae
      481 ldmlkdpsfr gsddgegesf ngsptgsinl slddlssvpt detvqlhayi sdtvyadcdp
      541 yavagvcndh gktyalyait vhrrnansee mwktyrrysd fhdfhmrite qfenlanilk
      601 lpgkktfnnm dreflekrkk dlnaylqlll npemmkaspa lahyvydfle nkayskgkgd
      661 farkmdtfvn plrnsmrnvs navksipdsl aegmtkmsdn mgkmserlgq dikqsffkvp
      721 plmqktysdp dhcrvaapid dnvddniplr vmlllmdevf dlkernqwlr rniknllqql
      781 iratygdtin rkivdhvdwm tspeqvadav krfrdafwpn gilaesvprr dkairmrtrv
      841 agktkllevm pdelkhiiga ettrkgilrv femfqhsqln krmvyvfler fletlfpqnk
      901 fpelfhklhs rskqmqrykq rlhstqapsl qkr
//
LOCUS       XP_041322311             914 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-13 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322311
VERSION     XP_041322311.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466377.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..914
                     /product="sorting nexin-13 isoform X4"
                     /calculated_mol_wt=106246
     Region          97..284
                     /region_name="PXA"
                     /note="PXA domain; cl02564"
                     /db_xref="CDD:470618"
     Region          377..511
                     /region_name="RGS_SNX13"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the Sorting Nexin 13 (SNX13) protein; cd08719"
                     /db_xref="CDD:188674"
     Region          557..687
                     /region_name="PX_SNX13"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 13; cd06873"
                     /db_xref="CDD:132783"
     Site            order(612..614,639..640,653)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132783"
     Region          749..857
                     /region_name="Nexin_C"
                     /note="Sorting nexin C terminal; pfam08628"
                     /db_xref="CDD:462541"
     CDS             1..914
                     /gene="SNX13"
                     /coded_by="XM_041466377.1:113..2857"
                     /db_xref="GeneID:121352942"
ORIGIN      
        1 mltetslsiw gwgslglvlf lvtfgpfaif yfafyilcfv gggfvvtllf gksnsekyle
       61 qcehsflpct svgipkciee mkrearpiki drrltganii deplqqviqf slrdyvqywy
      121 ytlsddesfl leirqalqya lvqfsarske tdwqpyfttr lvddfgthlr vfrkaqqria
      181 ekgnqmkdqa eelvdtffev evemekevcr dlvctspkde egflrdlcev llyillppgd
      241 fqnkimryfv reilsrgill plinqlsdpd yinqyviwmi rdsncnyeaf mniiklsdni
      301 geleavkdka seelqylrsl dtagddinti knqinsllyv ikvcdsriqr lqsgkeidtv
      361 klaanfgklc tvpldhilvd nvalqffmdy mqqtggqahl ffwmtvegyr vtaqqqlevl
      421 qsrqkdgkhq tnqtkgllra aafgvyeqyl sekasprvni ddnlvaklae tlnhedptpe
      481 ifddiqrkvy elmlrderfy psfkqnvlyv rmlaeldmlk dpsfrgsddg egesfngspt
      541 gsinlslddl ssvptdetvq lhayisdtvy adcdpyavag vcndhgktya lyaitvhrrn
      601 anseemwkty rrysdfhdfh mriteqfenl anilklpgkk tfnnmdrefl ekrkkdlnay
      661 lqlllnpemm kaspalahyv ydflenkays kgkgdfarkv pplmqktysd pdhcrvaapi
      721 ddnvddnipl rvmlllmdev fdlkernqwl rrniknllqq liratygdti nrkivdhvdw
      781 mtspeqvada vkrfrdafwp ngilaesvpr rdkairmrtr vagktkllev mpdelkhiig
      841 aettrkgilr vfemfqhsql nkrmvyvfle rfletlfpqn kfpelfhklh srskqmqryk
      901 qrlhstqaps lqkr
//
LOCUS       XP_041322313             826 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322313
VERSION     XP_041322313.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466379.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..826
                     /product="TBC1 domain family member 5 isoform X1"
                     /calculated_mol_wt=92502
     Region          79..380
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..826
                     /gene="TBC1D5"
                     /coded_by="XM_041466379.1:369..2849"
                     /db_xref="GeneID:121352943"
ORIGIN      
        1 myhsvsetsh plqteeqeig idplqsflnk pgeggsneng stpstsdsdg tfisyskewe
       61 elfvnnnyla tirlkgingq lrssrfrsvc wklfldvlpq drsqwiktis dlrtsyskik
      121 eihitnprka gqqdliinnp lsqdegslwn kffqdkelra mieqdvtrtf pemqyfqqen
      181 vrkiltdvlf cyareneqll ykqgmhella pivfilhcdh qafshaseaa qpseemkvll
      241 npeylehday amftrlmkta ehwfstfehd sqkekdvmit pmpfarpqdl gpsiaivakv
      301 nqiqdhllkk hdielymhln rleiapqiyg lrwvrllfgr efplqdllvv wdalfadsit
      361 lnlvdyifva mllyirdali ssnyqtclgl lmhyppigdv hslilralfl rdpkrnprpv
      421 thqfqqnldy ykargadlmn ktrasakaap lninkvsnsl lnfgrkliap amasggavgt
      481 paggssfpps svpsrstvea pqhqhhhqqh hhhhqsqqqr mmksesmpvq lgkgeageaa
      541 ppgpaqaqqh tpattgqssk nissspsies lsggreftgs pplsaskkds ffstisrsrs
      601 qsktmsrkes eeeleaqisf lqgqlndlea mckycakmmn thlgniqevi lqerlekede
      661 ilvslaglkq ikdilkgslr fnqsqleaee neqitiaddh ycsnnqnkgs gdvlkgpvmt
      721 kqqfisgqqt ttdpstsesk saddyimvsk eeersksavp epaqplqahk eaavkpeaps
      781 rsslvfsdpl mgsisasssn lssspdddss nnskdsdfai vspldi
//
LOCUS       XP_041322314             826 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322314
VERSION     XP_041322314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..826
                     /product="TBC1 domain family member 5 isoform X1"
                     /calculated_mol_wt=92502
     Region          79..380
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..826
                     /gene="TBC1D5"
                     /coded_by="XM_041466380.1:296..2776"
                     /db_xref="GeneID:121352943"
ORIGIN      
        1 myhsvsetsh plqteeqeig idplqsflnk pgeggsneng stpstsdsdg tfisyskewe
       61 elfvnnnyla tirlkgingq lrssrfrsvc wklfldvlpq drsqwiktis dlrtsyskik
      121 eihitnprka gqqdliinnp lsqdegslwn kffqdkelra mieqdvtrtf pemqyfqqen
      181 vrkiltdvlf cyareneqll ykqgmhella pivfilhcdh qafshaseaa qpseemkvll
      241 npeylehday amftrlmkta ehwfstfehd sqkekdvmit pmpfarpqdl gpsiaivakv
      301 nqiqdhllkk hdielymhln rleiapqiyg lrwvrllfgr efplqdllvv wdalfadsit
      361 lnlvdyifva mllyirdali ssnyqtclgl lmhyppigdv hslilralfl rdpkrnprpv
      421 thqfqqnldy ykargadlmn ktrasakaap lninkvsnsl lnfgrkliap amasggavgt
      481 paggssfpps svpsrstvea pqhqhhhqqh hhhhqsqqqr mmksesmpvq lgkgeageaa
      541 ppgpaqaqqh tpattgqssk nissspsies lsggreftgs pplsaskkds ffstisrsrs
      601 qsktmsrkes eeeleaqisf lqgqlndlea mckycakmmn thlgniqevi lqerlekede
      661 ilvslaglkq ikdilkgslr fnqsqleaee neqitiaddh ycsnnqnkgs gdvlkgpvmt
      721 kqqfisgqqt ttdpstsesk saddyimvsk eeersksavp epaqplqahk eaavkpeaps
      781 rsslvfsdpl mgsisasssn lssspdddss nnskdsdfai vspldi
//
LOCUS       XP_041322315             826 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322315
VERSION     XP_041322315.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466381.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..826
                     /product="TBC1 domain family member 5 isoform X1"
                     /calculated_mol_wt=92502
     Region          79..380
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..826
                     /gene="TBC1D5"
                     /coded_by="XM_041466381.1:279..2759"
                     /db_xref="GeneID:121352943"
ORIGIN      
        1 myhsvsetsh plqteeqeig idplqsflnk pgeggsneng stpstsdsdg tfisyskewe
       61 elfvnnnyla tirlkgingq lrssrfrsvc wklfldvlpq drsqwiktis dlrtsyskik
      121 eihitnprka gqqdliinnp lsqdegslwn kffqdkelra mieqdvtrtf pemqyfqqen
      181 vrkiltdvlf cyareneqll ykqgmhella pivfilhcdh qafshaseaa qpseemkvll
      241 npeylehday amftrlmkta ehwfstfehd sqkekdvmit pmpfarpqdl gpsiaivakv
      301 nqiqdhllkk hdielymhln rleiapqiyg lrwvrllfgr efplqdllvv wdalfadsit
      361 lnlvdyifva mllyirdali ssnyqtclgl lmhyppigdv hslilralfl rdpkrnprpv
      421 thqfqqnldy ykargadlmn ktrasakaap lninkvsnsl lnfgrkliap amasggavgt
      481 paggssfpps svpsrstvea pqhqhhhqqh hhhhqsqqqr mmksesmpvq lgkgeageaa
      541 ppgpaqaqqh tpattgqssk nissspsies lsggreftgs pplsaskkds ffstisrsrs
      601 qsktmsrkes eeeleaqisf lqgqlndlea mckycakmmn thlgniqevi lqerlekede
      661 ilvslaglkq ikdilkgslr fnqsqleaee neqitiaddh ycsnnqnkgs gdvlkgpvmt
      721 kqqfisgqqt ttdpstsesk saddyimvsk eeersksavp epaqplqahk eaavkpeaps
      781 rsslvfsdpl mgsisasssn lssspdddss nnskdsdfai vspldi
//
LOCUS       XP_041322316             826 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322316
VERSION     XP_041322316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..826
                     /product="TBC1 domain family member 5 isoform X1"
                     /calculated_mol_wt=92502
     Region          79..380
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..826
                     /gene="TBC1D5"
                     /coded_by="XM_041466382.1:446..2926"
                     /db_xref="GeneID:121352943"
ORIGIN      
        1 myhsvsetsh plqteeqeig idplqsflnk pgeggsneng stpstsdsdg tfisyskewe
       61 elfvnnnyla tirlkgingq lrssrfrsvc wklfldvlpq drsqwiktis dlrtsyskik
      121 eihitnprka gqqdliinnp lsqdegslwn kffqdkelra mieqdvtrtf pemqyfqqen
      181 vrkiltdvlf cyareneqll ykqgmhella pivfilhcdh qafshaseaa qpseemkvll
      241 npeylehday amftrlmkta ehwfstfehd sqkekdvmit pmpfarpqdl gpsiaivakv
      301 nqiqdhllkk hdielymhln rleiapqiyg lrwvrllfgr efplqdllvv wdalfadsit
      361 lnlvdyifva mllyirdali ssnyqtclgl lmhyppigdv hslilralfl rdpkrnprpv
      421 thqfqqnldy ykargadlmn ktrasakaap lninkvsnsl lnfgrkliap amasggavgt
      481 paggssfpps svpsrstvea pqhqhhhqqh hhhhqsqqqr mmksesmpvq lgkgeageaa
      541 ppgpaqaqqh tpattgqssk nissspsies lsggreftgs pplsaskkds ffstisrsrs
      601 qsktmsrkes eeeleaqisf lqgqlndlea mckycakmmn thlgniqevi lqerlekede
      661 ilvslaglkq ikdilkgslr fnqsqleaee neqitiaddh ycsnnqnkgs gdvlkgpvmt
      721 kqqfisgqqt ttdpstsesk saddyimvsk eeersksavp epaqplqahk eaavkpeaps
      781 rsslvfsdpl mgsisasssn lssspdddss nnskdsdfai vspldi
//
LOCUS       XP_041322317             804 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322317
VERSION     XP_041322317.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466383.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..804
                     /product="TBC1 domain family member 5 isoform X2"
                     /calculated_mol_wt=90432
     Region          79..380
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..804
                     /gene="TBC1D5"
                     /coded_by="XM_041466383.1:369..2783"
                     /db_xref="GeneID:121352943"
ORIGIN      
        1 myhsvsetsh plqteeqeig idplqsflnk pgeggsneng stpstsdsdg tfisyskewe
       61 elfvnnnyla tirlkgingq lrssrfrsvc wklfldvlpq drsqwiktis dlrtsyskik
      121 eihitnprka gqqdliinnp lsqdegslwn kffqdkelra mieqdvtrtf pemqyfqqen
      181 vrkiltdvlf cyareneqll ykqgmhella pivfilhcdh qafshaseaa qpseemkvll
      241 npeylehday amftrlmkta ehwfstfehd sqkekdvmit pmpfarpqdl gpsiaivakv
      301 nqiqdhllkk hdielymhln rleiapqiyg lrwvrllfgr efplqdllvv wdalfadsit
      361 lnlvdyifva mllyirdali ssnyqtclgl lmhyppigdv hslilralfl rdpkrnprpv
      421 thqfqqnldy ykargadlmn ktrasakaap lninkvsnsl lnfgrkliap amasggavgt
      481 paggssfpps svpsrstvea pqhqhhhqqh hhhhqsqqqr mmksesmpvq lgkgqsskni
      541 ssspsiesls ggreftgspp lsaskkdsff stisrsrsqs ktmsrkesee eleaqisflq
      601 gqlndleamc kycakmmnth lgniqevilq erlekedeil vslaglkqik dilkgslrfn
      661 qsqleaeene qitiaddhyc snnqnkgsgd vlkgpvmtkq qfisgqqttt dpstsesksa
      721 ddyimvskee ersksavpep aqplqahkea avkpeapsrs slvfsdplmg sisasssnls
      781 sspdddssnn skdsdfaivs pldi
//
LOCUS       XP_041322318             296 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 E1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322318
VERSION     XP_041322318.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466384.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="ubiquitin-conjugating enzyme E2 E1 isoform X1"
                     /calculated_mol_wt=32037
     Region          153..293
                     /region_name="UBCc_UBE2E"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 E1-E3 and
                     related proteins; cd23793"
                     /db_xref="CDD:467413"
     CDS             1..296
                     /gene="LOC121352944"
                     /coded_by="XM_041466384.1:1..891"
                     /db_xref="GeneID:121352944"
ORIGIN      
        1 mtsrsapslc vsdvtkcsvg dngilnsgrg rvgsgcsccw fraepgegre dtaaalglkq
       61 vrscccrrrd kaaretrvar psrteeeqpd tkgevgvcgg gvamsdddsr astsssssss
      121 snqqtekets tpkkkeskvs msknskllst sakriqkela ditldpppnc sagpkgdniy
      181 ewrstilgpp gsvyeggvff lditftpeyp fkppkvtfrt riyhcninsq gvicldilkd
      241 nwspaltisk vllsicsllt dcnpadplvg siatqymtnr aehdrmarqw tkryat
//
LOCUS       XP_041322319             232 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 E1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322319
VERSION     XP_041322319.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466385.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..232
                     /product="ubiquitin-conjugating enzyme E2 E1 isoform X2"
                     /calculated_mol_wt=25245
     Region          89..229
                     /region_name="UBCc_UBE2E"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 E1-E3 and
                     related proteins; cd23793"
                     /db_xref="CDD:467413"
     CDS             1..232
                     /gene="LOC121352944"
                     /coded_by="XM_041466385.1:1..699"
                     /db_xref="GeneID:121352944"
ORIGIN      
        1 mtsrsapslc vsdvtkcsvg dngilnsgrg rvgsgcsccw fraepgegre dtaaalglkq
       61 teketstpkk keskvsmskn skllstsakr iqkeladitl dpppncsagp kgdniyewrs
      121 tilgppgsvy eggvffldit ftpeypfkpp kvtfrtriyh cninsqgvic ldilkdnwsp
      181 altiskvlls icslltdcnp adplvgsiat qymtnraehd rmarqwtkry at
//
LOCUS       XP_041322320             156 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 E1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322320
VERSION     XP_041322320.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466386.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="ubiquitin-conjugating enzyme E2 E1 isoform X3"
                     /calculated_mol_wt=17324
     Region          13..153
                     /region_name="UBCc_UBE2E"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 E1-E3 and
                     related proteins; cd23793"
                     /db_xref="CDD:467413"
     CDS             1..156
                     /gene="LOC121352944"
                     /coded_by="XM_041466386.1:192..662"
                     /db_xref="GeneID:121352944"
ORIGIN      
        1 msknskllst sakriqkela ditldpppnc sagpkgdniy ewrstilgpp gsvyeggvff
       61 lditftpeyp fkppkvtfrt riyhcninsq gvicldilkd nwspaltisk vllsicsllt
      121 dcnpadplvg siatqymtnr aehdrmarqw tkryat
//
LOCUS       XP_041322322             156 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 E1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322322
VERSION     XP_041322322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="ubiquitin-conjugating enzyme E2 E1 isoform X3"
                     /calculated_mol_wt=17324
     Region          13..153
                     /region_name="UBCc_UBE2E"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 E1-E3 and
                     related proteins; cd23793"
                     /db_xref="CDD:467413"
     CDS             1..156
                     /gene="LOC121352944"
                     /coded_by="XM_041466388.1:133..603"
                     /db_xref="GeneID:121352944"
ORIGIN      
        1 msknskllst sakriqkela ditldpppnc sagpkgdniy ewrstilgpp gsvyeggvff
       61 lditftpeyp fkppkvtfrt riyhcninsq gvicldilkd nwspaltisk vllsicsllt
      121 dcnpadplvg siatqymtnr aehdrmarqw tkryat
//
LOCUS       XP_041322323             191 aa            linear   VRT 06-MAY-2021
DEFINITION  NF-kappa-B inhibitor-interacting Ras-like protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322323
VERSION     XP_041322323.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466389.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="NF-kappa-B inhibitor-interacting Ras-like
                     protein 1"
                     /calculated_mol_wt=21343
     Region          6..168
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            11..18
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(13..19,64,120..121,123,150..152)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            38
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            41..43
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            61..64
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(63..64,80..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            120..123
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            150..152
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..191
                     /gene="NKIRAS1"
                     /coded_by="XM_041466389.1:469..1044"
                     /db_xref="GeneID:121352945"
ORIGIN      
        1 mgkgykvvvc gmasvgktai leqllygkht vgleegatme dvylasvetd rgvkeqlrly
       61 dtrglqegve lpkhyfsvad gfvlvyavts leafqrvell kreidvfrdk kevavivlgn
      121 ktdlldqrqv eteaaqqwar aekvrlwevt vtdrktllep ftflasklsq sqnkstfplp
      181 grkskgnnce n
//
LOCUS       XP_041322324             191 aa            linear   VRT 06-MAY-2021
DEFINITION  NF-kappa-B inhibitor-interacting Ras-like protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322324
VERSION     XP_041322324.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466390.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="NF-kappa-B inhibitor-interacting Ras-like
                     protein 1"
                     /calculated_mol_wt=21343
     Region          6..168
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            11..18
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(13..19,64,120..121,123,150..152)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            38
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            41..43
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            61..64
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(63..64,80..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            120..123
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            150..152
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..191
                     /gene="NKIRAS1"
                     /coded_by="XM_041466390.1:300..875"
                     /db_xref="GeneID:121352945"
ORIGIN      
        1 mgkgykvvvc gmasvgktai leqllygkht vgleegatme dvylasvetd rgvkeqlrly
       61 dtrglqegve lpkhyfsvad gfvlvyavts leafqrvell kreidvfrdk kevavivlgn
      121 ktdlldqrqv eteaaqqwar aekvrlwevt vtdrktllep ftflasklsq sqnkstfplp
      181 grkskgnnce n
//
LOCUS       XP_041322325             191 aa            linear   VRT 06-MAY-2021
DEFINITION  NF-kappa-B inhibitor-interacting Ras-like protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322325
VERSION     XP_041322325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466391.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="NF-kappa-B inhibitor-interacting Ras-like
                     protein 1"
                     /calculated_mol_wt=21343
     Region          6..168
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            11..18
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(13..19,64,120..121,123,150..152)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            38
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            41..43
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            61..64
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(63..64,80..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            120..123
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            150..152
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..191
                     /gene="NKIRAS1"
                     /coded_by="XM_041466391.1:144..719"
                     /db_xref="GeneID:121352945"
ORIGIN      
        1 mgkgykvvvc gmasvgktai leqllygkht vgleegatme dvylasvetd rgvkeqlrly
       61 dtrglqegve lpkhyfsvad gfvlvyavts leafqrvell kreidvfrdk kevavivlgn
      121 ktdlldqrqv eteaaqqwar aekvrlwevt vtdrktllep ftflasklsq sqnkstfplp
      181 grkskgnnce n
//
LOCUS       XP_041322326            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  nephrocystin-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322326
VERSION     XP_041322326.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466392.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="nephrocystin-3"
                     /calculated_mol_wt=149170
     Region          <79..>189
                     /region_name="COG2433"
                     /note="Possible nuclease of RNase H fold, RuvC/YqgF family
                     [General function prediction only]"
                     /db_xref="CDD:441980"
     Region          882..>1064
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          930..958
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <938..1276
                     /region_name="FxSxx_TPR"
                     /note="FxSxx-COOH system tetratricopeptide repeat protein;
                     NF040586"
                     /db_xref="CDD:468560"
     Region          968..1001
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1014..1066
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1080..1108
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1122..1150
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(1123,1126..1127,1130..1131,1133,1162,1165,1169,
                     1172..1173,1175..1176,1207,1210..1211,1214..1215,1218)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          1160..1193
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1206..1234
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          1248..1276
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..1317
                     /gene="NPHP3"
                     /coded_by="XM_041466392.1:186..4139"
                     /db_xref="GeneID:121352946"
ORIGIN      
        1 mgtasslvsp agavgevied tygggggeac eipvevkpka rllrgslrrv ggsrpgglig
       61 asfkstasvq elecvaeyer lrkeyeifrv sknnevasmv kkeakldren krlraelqal
      121 qktyqkilre kesaleakyq ameraatfeh drdkvkrqfk ifretkenei qdllrakrel
      181 eaklqrlqaq giqvfdpees dsddnctdvt aagaqseywn ggvlgsepsm gsmmqlqqsf
      241 rgpefahssi dvegpfanin rddwdaavas llqvtplfsh slwsntvrcy iistdetqpe
      301 vtifirnysp klqrvcetmg yffqvvnfst enerplqnvr kweieksslv illlhltlps
      361 clledceeaf lrnpeekprl iyhrredgkv ssvsvqqlie qiscmnkakv idhvggmeeg
      421 ayeiyncvek iikqdilgce mtdlegkdlg nkedssapee evfgdvlwda hdeqeqmeaf
      481 qqasnstcel gfekyferln dlvaapapip pllvsggpgs gkslllskwi qlqqkhspnt
      541 lilyhfvgrp lstssesali ikrltlklmq hswlvspltf dpaklleefp rwleklsarh
      601 qgsiiiiids idqiqqaekh mkwlidplpv nvrvivsvnv etcpqawrlw ptlhldplns
      661 kdvkslisae cnsanvkltk eqekklerhc rsattcnaly vtllgktiac vgktgnidei
      721 lqqccqcqdt vslyrlvlrs iqeslqsdke kdllreilcv igvshngvse selmelypel
      781 tsvvlasllh slhkmcllty gcgllkfqhl qawemvkley meagenvisa yrqklveyft
      841 mqlsqdrvtw rsadelpwlf qqqgdkqklh kcllnlfvsq nlykrghfae llsywqlvgk
      901 dkssmaaeyf dslkeyekss egeesmicla dlyetlgrfl kdlgllsqav aplqrsleir
      961 etaldpdhpr vaqslhqlag vyvqwkkfgn aeqlykqale isenaygaeh prvareldal
     1021 atlyqkqnky eqaeqlrkks fkirqkaarq kgslcgfall rqralqleel tlgkdtsdna
     1081 rtlnelgvly ylqnnletae lflkrslemr ervlgsdhpd caqslnnlaa lynekkhydk
     1141 aeelyekald irrralapdh pslaytvkhl avlykkmgkl dkavplyela veirqksfgp
     1201 khpsvatalv nlavlycqmk kqiealplye ralkiyedsf gqmhprvget lknlavlsye
     1261 rgdfekaael ykrameikea etlliggkat srhsssgdtf slksalspna llehgqr
//
LOCUS       XP_041322327             399 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-like modifier-activating enzyme 5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322327
VERSION     XP_041322327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..399
                     /product="ubiquitin-like modifier-activating enzyme 5"
                     /calculated_mol_wt=44313
     Region          47..292
                     /region_name="ThiF_MoeB_HesA_family"
                     /note="ThiF_MoeB_HesA. Family of E1-like enzymes involved
                     in molybdopterin and thiamine biosynthesis family. The
                     common reaction mechanism catalyzed by MoeB and ThiF, like
                     other E1 enzymes, begins with a nucleophilic attack of the
                     C-terminal carboxylate of MoaD...; cd00757"
                     /db_xref="CDD:238386"
     Site            order(75,77,79,99,101,110,122,176,182)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:238386"
     Site            order(79,177..179,183,201..202,208,210,277,281,288,
                     290..291)
                     /site_type="other"
                     /note="substrate interface [chemical binding]"
                     /db_xref="CDD:238386"
     CDS             1..399
                     /gene="UBA5"
                     /coded_by="XM_041466393.1:28..1227"
                     /db_xref="GeneID:121352947"
ORIGIN      
        1 madpgrlerl errvreleee larekrgraa araridtmsa evtdsnpysr lmalkrmgiv
       61 kdyekirtft vavvgvggvg svtaemltrc gigklllfdy dkvelanmnr lffqphqagl
      121 skvqaaehtl rdinpdvqfe vhnynittld nfehfmdris ngaleegkpv dlvlscvdnf
      181 earmaintac nelgqiwmes gvsenavsgh iqliipgesa cfacapplvv aanidektlk
      241 regvcaaslp ttmgvvagml vqnvlkylln fgtvsyylgy namqdffptm smkpnpqcsd
      301 hncrkqqeny kkkeaarpke eviekeeeiv hedndwgiel vseisedelk aasgpvpelp
      361 egisvaytip dkeenlitge avaeseesle elmakmrnm
//
LOCUS       XP_041322328             862 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041322328
VERSION     XP_041322328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..862
                     /product="aryl hydrocarbon receptor"
                     /calculated_mol_wt=96693
     Region          25..85
                     /region_name="bHLH-PAS_AhR"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor (AhR) and
                     similar proteins; cd11436"
                     /db_xref="CDD:381442"
     Site            order(31..37,39,41,62..64)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381442"
     Site            order(36,39..40,43..44,46..47,50..54,62..64,67..77,80,
                     83..84)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381442"
     Region          114..>184
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          300..382
                     /region_name="PAS_3"
                     /note="PAS fold; pfam08447"
                     /db_xref="CDD:430001"
     Site            order(320,325,333,336..337,365,367)
                     /site_type="other"
                     /note="heme pocket [chemical binding]"
                     /db_xref="CDD:238075"
     CDS             1..862
                     /gene="AHR"
                     /coded_by="XM_041466394.1:61..2649"
                     /db_xref="GeneID:121352948"
ORIGIN      
        1 mnpnvtyasr krrkpvqkiv kpspaegvks npskrhrdrl naeldrlasl lpfpqdviak
       61 ldklsvlrls vsylraksff dvalksssst rperngiqet srtgncgegm qilegelllq
      121 alngfvlvvt adalvfyvss tiqdylgfqq sdiihqsvfe lihtedrpef qrqlhwalnp
      181 aqsgdsgpsv qgdngfsqpa ayynpdqlpp enssfmernf icrlrclldn ssgflamnfq
      241 grlkflhgqn kkgkdgatls pqlalfavat plqppsilei rtknfifrtk hkldftptgc
      301 dakgkivlgy teaelcmrgt gyqfihaadm lycaenhirm mktgesgmtv frlltkenrw
      361 awvqanarlv ykngrpdyii atqrpltdee gaehlrkrnm klpfmfatge avlyevsfpm
      421 sslmdpsqpk skstvgkgak aalhddsvdp nsllgvmlrq desvylcppa shklsfernf
      481 fadsrdelgg vvssgwtdnl lpagnhsilk relmecsqds tvplpedsaa lfqdnkssdl
      541 ysimknlgid fedlkciqqd eeffktelsd vddigdinit deiltyvqds lnksdflysd
      601 cnqqqplvqn egcmvqqdld phqlhhhqkq lveqqqqqqq qqqlcqkmkh mqvngmftnw
      661 ssgmplscsq qqpqqyvfpg mhastsefsy ksevntcpye crqdfvpykq ptammpqlsn
      721 faqmdfpaag fdgsnysass nfedflsclq qvpenlecgi nsesvmltpq tcyagavsmy
      781 pctqeaqpsc vdqmqyepmm tnqqqqtlgn kfqngfnggn vnesypsqld visnaqtath
      841 lqplhhpkep rsfsdlassg fm
//
LOCUS       XP_041322329            1223 aa            linear   VRT 06-MAY-2021
DEFINITION  epidermal growth factor receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041322329
VERSION     XP_041322329.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466395.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1223
                     /product="epidermal growth factor receptor"
                     /calculated_mol_wt=135573
     Region          63..175
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          194..342
                     /region_name="Furin-like"
                     /note="Furin-like cysteine rich region; pfam00757"
                     /db_xref="CDD:395614"
     Region          368..488
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          512..647
                     /region_name="GF_recep_IV"
                     /note="Growth factor receptor domain IV; pfam14843"
                     /db_xref="CDD:464344"
     Region          644..686
                     /region_name="TM_ErbB1"
                     /note="Transmembrane domain of Epidermal Growth Factor
                     Receptor or ErbB1, a Protein Tyrosine Kinase; cd12093"
                     /db_xref="CDD:213054"
     Site            order(653..655,657..662,665..666)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:213054"
     Region          713..1025
                     /region_name="PTKc_EGFR"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Epidermal Growth Factor Receptor; cd05108"
                     /db_xref="CDD:270683"
     Site            order(724..726,737..739,803..804,806,813..814,1018..1019)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270683"
     Site            order(727..728,731..732,754,800,802,806,850..851,864,
                     885..889,894,898)
                     /site_type="active"
                     /db_xref="CDD:270683"
     Site            order(727..728,735,752,754,775,799..800,802,850..851,853,
                     864)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270683"
     Site            863..888
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270683"
     Site            order(885..889,894,898)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270683"
     CDS             1..1223
                     /gene="EGFR"
                     /coded_by="XM_041466395.1:323..3994"
                     /db_xref="GeneID:121352949"
ORIGIN      
        1 mggrsplaaa gprgaavlvl llgrlalcla vegkkvcqgt nnkltqlghv edhftslqrm
       61 ynncevvlsn leityvehnr dlsflktiqe vagyvlialn mvdviplenl qiirgnvlyd
      121 nsyalavlsn yhmnktqglr qlpmkrlsei lnggvkisnn pklcnmdtvl wndiidtskk
      181 pptvlefasn lsscpkchqn ctedhcwgpg eqncqtltkv icaqqcsgrc rgkvpsdcch
      241 nqcaagctgp resdclacrk frddatckdt cpplvlynpt tyqmdvnpeg kysfgatcvk
      301 ecphnyvvtd hgscvrscna dtyeveengv rkckkcdglc skvcngigig elkgilsina
      361 tnidsfknct kingdvsilp vaflgdaftk tlpldpkkld vfktvkeisg flliqawpen
      421 atdlyafenl eiirgrtkqh gqyslavvnl kiqslglrsl keisdgdvai mknknlcyad
      481 tmdwhslfat esqktkilqn rdknecaaak hvcdplcsdi gcwgpgpfhc fscrffdrqk
      541 ecvkqcnilq geprefekds kclpchpecl vqnstmynat ctgpgpdncm kcahfidgph
      601 cvkscpagvl gendtlvwky adgnnvcqlc hpnctrgckg pglegcpngs kipsiaagvv
      661 ggllclvvvg lgiglylrrr hivrkrtlrr llqerelvep ltpsgeapnq ahlrilkete
      721 fkkvkvlgsg afgtvykglw ipegekvkip vaikelreat spkankeild eayvmasvdn
      781 phvcrllgic ltstvqlitq lmpygclldy irehkdnigs qyllnwcvqi akgmnyleer
      841 rlvhrdlaar nvlvktpqhv kitdfglakl lgadekeyha eggkvpikwm alesilhriy
      901 thqsdvwsyg vtvwelmtfg skpyegipas eissvlekge rlpqppicti dvymimvkcw
      961 midadsrpkf reliaefskm ardpprylvi qgddrmhlps ptdskfyrtl meeedmediv
     1021 dadeylvphq gffnspstsr tpllsslsat snnsattcid rngqghpvre dsfvqryssd
     1081 ptgafledsl ddsflpapey vnqlvpkkas asavqnpiyn nfsltanskv ptdssyqnsh
     1141 stavdnpeyl ntnqspltkt vfesspywiq agnhqinldn pdyqqdflpk etksngllkv
     1201 paaenpeylr vaapkseyie asa
//
LOCUS       XP_041322331             517 aa            linear   VRT 06-MAY-2021
DEFINITION  islet cell autoantigen 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322331
VERSION     XP_041322331.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466397.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="islet cell autoantigen 1 isoform X1"
                     /calculated_mol_wt=58674
     Region          55..258
                     /region_name="BAR_ICA69"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell
                     Autoantigen 69-kDa; cd07661"
                     /db_xref="CDD:153345"
     Site            order(71..72,78,82,85,88..89,92,95..96,100,102..103,106,
                     109..110,114..115,117..118,121,125,225,229..230,233..234,
                     236..237,244..245,247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153345"
     Site            order(77,80,83..84,87..88,90..92,94..95,130,133,137,
                     140..141)
                     /site_type="active"
                     /note="putative Rac binding site [active]"
                     /db_xref="CDD:153345"
     Region          263..517
                     /region_name="ICA69"
                     /note="Islet cell autoantigen ICA69, C-terminal domain;
                     pfam04629"
                     /db_xref="CDD:461374"
     CDS             1..517
                     /gene="ICA1"
                     /coded_by="XM_041466397.1:303..1856"
                     /db_xref="GeneID:121352950"
ORIGIN      
        1 mdghkynypr efydqyaqsq eksvvnkmqq kywktkqtli kvtgkkedeh vvasdadlda
       61 klelfhsiqr tcmellkaie lyqkricfls qeenelgkfl rsqgsqdktr agkmmqatgk
      121 alcfssqqrl alraplsrly qevetfryra isdtwltvnr meqyrteyrg allwmkdvsq
      181 eldpdlykqm ekfrkvqaqv rhaklnfdkl ktdvcqkvdl lgasrcnlls hvlttyqttl
      241 lhfwektsht maaihesfkg yqpyeftmlk slqdpvnklt ekaekedqqi estnsvedqq
      301 sqlislddes htkesnysad dgkdvistlq ghcnheqnsg aidelldlqp eenaskekfv
      361 rslepelgdk ddmvllneil nassldegef skewtavfgq aadvtmnssa rdgentsssa
      421 vpapsgylps qlldqnmndl qsslhgwaas svsppsipqp aqkphslnvs ddktpvkest
      481 knpkdltawf slfadldpls npdavgktdk ehellna
//
LOCUS       XP_041322332             517 aa            linear   VRT 06-MAY-2021
DEFINITION  islet cell autoantigen 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322332
VERSION     XP_041322332.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466398.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="islet cell autoantigen 1 isoform X1"
                     /calculated_mol_wt=58674
     Region          55..258
                     /region_name="BAR_ICA69"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell
                     Autoantigen 69-kDa; cd07661"
                     /db_xref="CDD:153345"
     Site            order(71..72,78,82,85,88..89,92,95..96,100,102..103,106,
                     109..110,114..115,117..118,121,125,225,229..230,233..234,
                     236..237,244..245,247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153345"
     Site            order(77,80,83..84,87..88,90..92,94..95,130,133,137,
                     140..141)
                     /site_type="active"
                     /note="putative Rac binding site [active]"
                     /db_xref="CDD:153345"
     Region          263..517
                     /region_name="ICA69"
                     /note="Islet cell autoantigen ICA69, C-terminal domain;
                     pfam04629"
                     /db_xref="CDD:461374"
     CDS             1..517
                     /gene="ICA1"
                     /coded_by="XM_041466398.1:303..1856"
                     /db_xref="GeneID:121352950"
ORIGIN      
        1 mdghkynypr efydqyaqsq eksvvnkmqq kywktkqtli kvtgkkedeh vvasdadlda
       61 klelfhsiqr tcmellkaie lyqkricfls qeenelgkfl rsqgsqdktr agkmmqatgk
      121 alcfssqqrl alraplsrly qevetfryra isdtwltvnr meqyrteyrg allwmkdvsq
      181 eldpdlykqm ekfrkvqaqv rhaklnfdkl ktdvcqkvdl lgasrcnlls hvlttyqttl
      241 lhfwektsht maaihesfkg yqpyeftmlk slqdpvnklt ekaekedqqi estnsvedqq
      301 sqlislddes htkesnysad dgkdvistlq ghcnheqnsg aidelldlqp eenaskekfv
      361 rslepelgdk ddmvllneil nassldegef skewtavfgq aadvtmnssa rdgentsssa
      421 vpapsgylps qlldqnmndl qsslhgwaas svsppsipqp aqkphslnvs ddktpvkest
      481 knpkdltawf slfadldpls npdavgktdk ehellna
//
LOCUS       XP_041322333             517 aa            linear   VRT 06-MAY-2021
DEFINITION  islet cell autoantigen 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322333
VERSION     XP_041322333.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466399.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="islet cell autoantigen 1 isoform X1"
                     /calculated_mol_wt=58674
     Region          55..258
                     /region_name="BAR_ICA69"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell
                     Autoantigen 69-kDa; cd07661"
                     /db_xref="CDD:153345"
     Site            order(71..72,78,82,85,88..89,92,95..96,100,102..103,106,
                     109..110,114..115,117..118,121,125,225,229..230,233..234,
                     236..237,244..245,247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153345"
     Site            order(77,80,83..84,87..88,90..92,94..95,130,133,137,
                     140..141)
                     /site_type="active"
                     /note="putative Rac binding site [active]"
                     /db_xref="CDD:153345"
     Region          263..517
                     /region_name="ICA69"
                     /note="Islet cell autoantigen ICA69, C-terminal domain;
                     pfam04629"
                     /db_xref="CDD:461374"
     CDS             1..517
                     /gene="ICA1"
                     /coded_by="XM_041466399.1:205..1758"
                     /db_xref="GeneID:121352950"
ORIGIN      
        1 mdghkynypr efydqyaqsq eksvvnkmqq kywktkqtli kvtgkkedeh vvasdadlda
       61 klelfhsiqr tcmellkaie lyqkricfls qeenelgkfl rsqgsqdktr agkmmqatgk
      121 alcfssqqrl alraplsrly qevetfryra isdtwltvnr meqyrteyrg allwmkdvsq
      181 eldpdlykqm ekfrkvqaqv rhaklnfdkl ktdvcqkvdl lgasrcnlls hvlttyqttl
      241 lhfwektsht maaihesfkg yqpyeftmlk slqdpvnklt ekaekedqqi estnsvedqq
      301 sqlislddes htkesnysad dgkdvistlq ghcnheqnsg aidelldlqp eenaskekfv
      361 rslepelgdk ddmvllneil nassldegef skewtavfgq aadvtmnssa rdgentsssa
      421 vpapsgylps qlldqnmndl qsslhgwaas svsppsipqp aqkphslnvs ddktpvkest
      481 knpkdltawf slfadldpls npdavgktdk ehellna
//
LOCUS       XP_041322334             496 aa            linear   VRT 06-MAY-2021
DEFINITION  islet cell autoantigen 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322334
VERSION     XP_041322334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="islet cell autoantigen 1 isoform X2"
                     /calculated_mol_wt=56424
     Region          55..258
                     /region_name="BAR_ICA69"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell
                     Autoantigen 69-kDa; cd07661"
                     /db_xref="CDD:153345"
     Site            order(71..72,78,82,85,88..89,92,95..96,100,102..103,106,
                     109..110,114..115,117..118,121,125,225,229..230,233..234,
                     236..237,244..245,247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153345"
     Site            order(77,80,83..84,87..88,90..92,94..95,130,133,137,
                     140..141)
                     /site_type="active"
                     /note="putative Rac binding site [active]"
                     /db_xref="CDD:153345"
     Region          263..496
                     /region_name="ICA69"
                     /note="Islet cell autoantigen ICA69, C-terminal domain;
                     pfam04629"
                     /db_xref="CDD:461374"
     CDS             1..496
                     /gene="ICA1"
                     /coded_by="XM_041466400.1:303..1793"
                     /db_xref="GeneID:121352950"
ORIGIN      
        1 mdghkynypr efydqyaqsq eksvvnkmqq kywktkqtli kvtgkkedeh vvasdadlda
       61 klelfhsiqr tcmellkaie lyqkricfls qeenelgkfl rsqgsqdktr agkmmqatgk
      121 alcfssqqrl alraplsrly qevetfryra isdtwltvnr meqyrteyrg allwmkdvsq
      181 eldpdlykqm ekfrkvqaqv rhaklnfdkl ktdvcqkvdl lgasrcnlls hvlttyqttl
      241 lhfwektsht maaihesfkg yqpyeftmlk slqdpvnklt ekaekedqqi estnsvedqq
      301 sqlislddes htkesnysga idelldlqpe enaskekfvr slepelgdkd dmvllneiln
      361 assldegefs kewtavfgqa advtmnssar dgentsssav papsgylpsq lldqnmndlq
      421 sslhgwaass vsppsipqpa qkphslnvsd dktpvkestk npkdltawfs lfadldplsn
      481 pdavgktdke hellna
//
LOCUS       XP_041322335             485 aa            linear   VRT 06-MAY-2021
DEFINITION  islet cell autoantigen 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322335
VERSION     XP_041322335.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466401.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="islet cell autoantigen 1 isoform X3"
                     /calculated_mol_wt=55365
     Region          55..258
                     /region_name="BAR_ICA69"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell
                     Autoantigen 69-kDa; cd07661"
                     /db_xref="CDD:153345"
     Site            order(71..72,78,82,85,88..89,92,95..96,100,102..103,106,
                     109..110,114..115,117..118,121,125,225,229..230,233..234,
                     236..237,244..245,247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153345"
     Site            order(77,80,83..84,87..88,90..92,94..95,130,133,137,
                     140..141)
                     /site_type="active"
                     /note="putative Rac binding site [active]"
                     /db_xref="CDD:153345"
     Region          263..485
                     /region_name="ICA69"
                     /note="Islet cell autoantigen ICA69, C-terminal domain;
                     pfam04629"
                     /db_xref="CDD:461374"
     CDS             1..485
                     /gene="ICA1"
                     /coded_by="XM_041466401.1:303..1760"
                     /db_xref="GeneID:121352950"
ORIGIN      
        1 mdghkynypr efydqyaqsq eksvvnkmqq kywktkqtli kvtgkkedeh vvasdadlda
       61 klelfhsiqr tcmellkaie lyqkricfls qeenelgkfl rsqgsqdktr agkmmqatgk
      121 alcfssqqrl alraplsrly qevetfryra isdtwltvnr meqyrteyrg allwmkdvsq
      181 eldpdlykqm ekfrkvqaqv rhaklnfdkl ktdvcqkvdl lgasrcnlls hvlttyqttl
      241 lhfwektsht maaihesfkg yqpyeftmlk slqdpvnklt ekaekedqqi estnsvedqq
      301 sqlislddes htkesnysad dgkdvistlq ghcnheqnsg aidelldlqp eenaskekfv
      361 rslepelgdk ddmvllneil nassldegef skewtavfgq aadvtmnssa rdgentsssa
      421 vpapsgylps qlldqnmndl qsslhestkn pkdltawfsl fadldplsnp davgktdkeh
      481 ellna
//
LOCUS       XP_041322336             476 aa            linear   VRT 06-MAY-2021
DEFINITION  islet cell autoantigen 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322336
VERSION     XP_041322336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="islet cell autoantigen 1 isoform X4"
                     /calculated_mol_wt=54260
     Region          55..258
                     /region_name="BAR_ICA69"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell
                     Autoantigen 69-kDa; cd07661"
                     /db_xref="CDD:153345"
     Site            order(71..72,78,82,85,88..89,92,95..96,100,102..103,106,
                     109..110,114..115,117..118,121,125,225,229..230,233..234,
                     236..237,244..245,247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153345"
     Site            order(77,80,83..84,87..88,90..92,94..95,130,133,137,
                     140..141)
                     /site_type="active"
                     /note="putative Rac binding site [active]"
                     /db_xref="CDD:153345"
     Region          263..>468
                     /region_name="ICA69"
                     /note="Islet cell autoantigen ICA69, C-terminal domain;
                     pfam04629"
                     /db_xref="CDD:461374"
     CDS             1..476
                     /gene="ICA1"
                     /coded_by="XM_041466402.1:303..1733"
                     /db_xref="GeneID:121352950"
ORIGIN      
        1 mdghkynypr efydqyaqsq eksvvnkmqq kywktkqtli kvtgkkedeh vvasdadlda
       61 klelfhsiqr tcmellkaie lyqkricfls qeenelgkfl rsqgsqdktr agkmmqatgk
      121 alcfssqqrl alraplsrly qevetfryra isdtwltvnr meqyrteyrg allwmkdvsq
      181 eldpdlykqm ekfrkvqaqv rhaklnfdkl ktdvcqkvdl lgasrcnlls hvlttyqttl
      241 lhfwektsht maaihesfkg yqpyeftmlk slqdpvnklt ekaekedqqi estnsvedqq
      301 sqlislddes htkesnysad dgkdvistlq ghcnheqnsg aidelldlqp eenaskekfv
      361 rslepelgdk ddmvllneil nassldegef skewtavfgq aadvtmnssa rdgentsssa
      421 vpapsgylps qlldqnmndl qsslhgwaas svsppsipqp aqkphslnnl qrilkt
//
LOCUS       XP_041322337             464 aa            linear   VRT 06-MAY-2021
DEFINITION  islet cell autoantigen 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322337
VERSION     XP_041322337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466403.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="islet cell autoantigen 1 isoform X5"
                     /calculated_mol_wt=53115
     Region          55..258
                     /region_name="BAR_ICA69"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Islet Cell
                     Autoantigen 69-kDa; cd07661"
                     /db_xref="CDD:153345"
     Site            order(71..72,78,82,85,88..89,92,95..96,100,102..103,106,
                     109..110,114..115,117..118,121,125,225,229..230,233..234,
                     236..237,244..245,247..248)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153345"
     Site            order(77,80,83..84,87..88,90..92,94..95,130,133,137,
                     140..141)
                     /site_type="active"
                     /note="putative Rac binding site [active]"
                     /db_xref="CDD:153345"
     Region          263..464
                     /region_name="ICA69"
                     /note="Islet cell autoantigen ICA69, C-terminal domain;
                     pfam04629"
                     /db_xref="CDD:461374"
     CDS             1..464
                     /gene="ICA1"
                     /coded_by="XM_041466403.1:303..1697"
                     /db_xref="GeneID:121352950"
ORIGIN      
        1 mdghkynypr efydqyaqsq eksvvnkmqq kywktkqtli kvtgkkedeh vvasdadlda
       61 klelfhsiqr tcmellkaie lyqkricfls qeenelgkfl rsqgsqdktr agkmmqatgk
      121 alcfssqqrl alraplsrly qevetfryra isdtwltvnr meqyrteyrg allwmkdvsq
      181 eldpdlykqm ekfrkvqaqv rhaklnfdkl ktdvcqkvdl lgasrcnlls hvlttyqttl
      241 lhfwektsht maaihesfkg yqpyeftmlk slqdpvnklt ekaekedqqi estnsvedqq
      301 sqlislddes htkesnysga idelldlqpe enaskekfvr slepelgdkd dmvllneiln
      361 assldegefs kewtavfgqa advtmnssar dgentsssav papsgylpsq lldqnmndlq
      421 sslhestknp kdltawfslf adldplsnpd avgktdkehe llna
//
LOCUS       XP_041322338            1328 aa            linear   VRT 06-MAY-2021
DEFINITION  contactin-associated protein-like 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322338
VERSION     XP_041322338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466404.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1328
                     /product="contactin-associated protein-like 2"
                     /calculated_mol_wt=147369
     Region          60..180
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(75,103,108)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     Region          216..345
                     /region_name="Laminin_G_2"
                     /note="Laminin G domain; pfam02210"
                     /db_xref="CDD:460494"
     Region          375..527
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          555..590
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          598..634
                     /region_name="GGGWT_bact"
                     /note="fibrinogen-like bacterial YCDxxxxGGGW domain;
                     NF040941"
                     /db_xref="CDD:468872"
     Region          803..943
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          967..1002
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Region          1053..1188
                     /region_name="LamG"
                     /note="Laminin G domain; smart00282"
                     /db_xref="CDD:214598"
     Region          1279..1297
                     /region_name="4.1m"
                     /note="putative band 4.1 homologues' binding motif;
                     smart00294"
                     /db_xref="CDD:128590"
     CDS             1..1328
                     /gene="CNTNAP2"
                     /coded_by="XM_041466404.1:539..4525"
                     /db_xref="GeneID:121352951"
ORIGIN      
        1 mvvvtragcr aalflwifis iscrartalp asqkcdeplv salphssfss sssmtssyvp
       61 gyaklnkrgg aggwspsdsd hyqwlqvdfg nrkqisavat qgrysssdwv tqyrmlysdt
      121 grnwkpyhqd gniwafpgnt nsdsvvrhdl qhpviaryvr ivpldwngeg qiglrievyg
      181 csywadvinf dghvvlpyrf rnkkmktlkd vislkfktse segvifhgeg qqgdyitlel
      241 kkaklvlnln lgsnqlgsif ghtsvttgsl lddhhwhsii ierhgrninl tldrhmqhfr
      301 tngefdyldl dyeitfggmp fsgkpssnsr knfkgcmesi nyngnnitdl arrkklepsn
      361 vgnlsfscve phtvpvffna tsylevpgrp sqdlfsvsfl frtwnpngll lfshfaddlg
      421 nveidinegk vsvhinvsqv kknridissg sglndgqwhe vrflakenfa vltidgdeas
      481 avrtnsplqv ktgekyffgg fpaqmndsdh slfehsfqgc mqsihvddql vdlhaveqge
      541 lgsfanvtid mcaiidrcvp nhcehdgkct qtwdsfkctc dgtsysgatc hnsiyelsce
      601 aykhlgktsn yywidpdgsg algplkvycn mtedkvwttv yhdlqvqtsv ggnspeklsv
      661 lqlnysatmd qisaitssae yceqfisysc kmsrllntpe gnpytwwvgk anekhyywgg
      721 sgpgiqkcac giernctdpk yycncdadyk qwrkdsgmls ykehlpvsqv vvgdldrpgs
      781 eakvsvgpvr cqgdrnywna asfvtsssyl hfstfqgets adisfyfkts asdgvflenl
      841 gntdfiklel ksatevsfsf dvgngpveiv vrspnplndd qwhrvnaern vkqaslqvdq
      901 lplevrkapt eghtrlelys qlyvgaaggq rgflgcirsl rmngvtldle erakvtpgvk
      961 pgcsghctsy gmycanggkc vekyngyscd csktaydgpf cikdvgaffe egmwlrynfh
     1021 spgtsmkdlv srtllssadp eitapdlsln keelsfsfst tkspcvlfyv ssytpdfmav
     1081 lvnptgnlqi rynlggtkep ynididhrnm angqphtvnv trngrdivlq ldhypptsys
     1141 lpatsdiqfn spkalflgkv ieigkidqdi ykyntpgftg clsrvqfnqi aplkaalrpt
     1201 nasshvhiqg elvesncgas pltippmsaa tdpwhldsas adfpyngqai gdgvnrnsai
     1261 iggviavvif tilctlvfli rymfrhkgty htneakgaes aesadaaimn ndpnftetid
     1321 eskkewli
//
LOCUS       XP_041322340             556 aa            linear   VRT 06-MAY-2021
DEFINITION  copine-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322340
VERSION     XP_041322340.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466406.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="copine-4"
                     /calculated_mol_wt=62258
     Region          24..140
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(39,45,97,99,109)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     Region          155..267
                     /region_name="C2B_Copine"
                     /note="C2 domain second repeat in Copine; cd04047"
                     /db_xref="CDD:176012"
     Site            order(170,176,232,234,240)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176012"
     Region          326..539
                     /region_name="Copine"
                     /note="pfam07002"
                     /db_xref="CDD:462064"
     CDS             1..556
                     /gene="CPNE4"
                     /coded_by="XM_041466406.1:84..1754"
                     /db_xref="GeneID:121352952"
ORIGIN      
        1 mkkmsniyes aantlgifns pcltkvelrv ackgisdrda lskpdpcvil kmqshgqwfe
       61 vdrtevirtc inpvfsklft vdfyfeevqr lrfevhdiss nhnglkeadf lggmectlgq
      121 ivsqrklsks llkhgntagk ssitviaeel sgnddyvels fsarklddkd ffsksdpfle
      181 ifrvnddatq qlvhrtevvm nnlnpawktf kvsvnslcsg dqdrrlkciv wdwdsngkhd
      241 figefsstfk emrgamegrq vqwecinpky kakkknykns givilnqcki hkmhsfldyi
      301 mggcqiqftv aidftasngd prnscslhyi hpyqpneylk alvavgeicq dydsdkmfpa
      361 fgfgarippe ykvshdfain fnednpecag iqgvveayqs clpklqlygp tniapiiqkv
      421 aksaseetnt keasqyfill iltdgvitdm adtreaivha shlpmsviiv gvgnadfsdm
      481 qmldgddgil rspkgepvlr divqfvpfrn fkhaspaala ksvlaevpnq vvdyyngkgi
      541 kpkcmseyes srtlap
//
LOCUS       XP_041322341            1305 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent translocase ABCB1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322341
VERSION     XP_041322341.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466407.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1305
                     /product="ATP-dependent translocase ABCB1 isoform X1"
                     /calculated_mol_wt=143902
     Region          6..1302
                     /region_name="PTZ00265"
                     /note="multidrug resistance protein (mdr1); Provisional"
                     /db_xref="CDD:240339"
     Region          51..641
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..1305
                     /gene="ABCB1"
                     /coded_by="XM_041466407.1:467..4384"
                     /db_xref="GeneID:121352953"
ORIGIN      
        1 mhsedekkht adgnsheiaa ssqdhesedk hrakkkqkkg ekpkvvspfa lfrysswsdk
       61 llmilgtlla iahgsslpfa miifgdmtds fvasgdtnft gnismnftse mlhkleedmt
      121 ryayyysgia agvllaayiq tsfwtlaagr qikkirenff haimrqeigw fdvndvgeln
      181 trllddvski negigdkigl lvqalttfvt gfivglirgw kltlvilavs pvlglsaalw
      241 akvlsaftdk eqaayakaga vaeevlaair tviafggqek eikryhknle dakrigirka
      301 itanismgaa flliyasyal afwygttlil sddytigkvl tvffsvliga fsigqtapsi
      361 eafasargaa yaifniidne pqidsysetg ykpdhikgnl elknvyfnyp srpdveilkg
      421 lnlkinsgqt valvggsgcg ksttvqliqr fydpkegtvt idgqdiktln vrylrevigv
      481 vnqepvlfat tiaenirygr edvtmeeiek atkeanaydf imklpnkfet vvgergaqls
      541 ggqkqriaia ralvrnpkil lldeatsald tesesvvqaa ldkaregrtt vvvahrlstv
      601 rnadviavfe ggviteignh aellerkgiy yklvnmqaie aevpssenhe nvlpssenye
      661 tvlplsenye nvrsvknres epdseesltr glrrrstrrs mkkpgeqnds pdeektspae
      721 eippasflki mklnktewpy fvagtlcaii ngalqpafav ifseiigifs etdkdilrkq
      781 snlysllflv lgiisfftff fqgftfgkag eiltmrlrfm afkamlrqdm awfdnpknst
      841 galttrland asqvkgatgv rlaliaqnva nlgtgilisl iygwqltlll lavvpiiava
      901 gmiemkmlag hakkdkqele aagkiateai enirtvvslt rerkfesmyg ehlivpyrns
      961 vkkahifgfc falsqammff tyagcfrfga ylvvnghmey ksvflvfsav vfgamalgqt
     1021 ssfapdyaka kisaahlfll fervpsidsy seegdkpetf egnitikdva fnypnrpevk
     1081 ilqglnlkve kgqtlalvgs sgcgkstvvq llerfydpld gemlfdgkta kalniqwlra
     1141 qigivsqepi lfdftiaeni aygdnsrqvs heeivsaakq anihsfidsl pdkyntrvgd
     1201 kgtqlsggqk qriaiaralv rkpqilllde atsaldtese kivqealdka qegrtcivia
     1261 hrlstiqnad kiavvqngrv ieqgthqqll aekgvyyslv nvqsg
//
LOCUS       XP_041322342            1304 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent translocase ABCB1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322342
VERSION     XP_041322342.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466408.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1304
                     /product="ATP-dependent translocase ABCB1 isoform X2"
                     /calculated_mol_wt=143737
     Region          47..1301
                     /region_name="PTZ00265"
                     /note="multidrug resistance protein (mdr1); Provisional"
                     /db_xref="CDD:240339"
     Region          50..640
                     /region_name="MdlB"
                     /note="ABC-type multidrug transport system, ATPase and
                     permease component [Defense mechanisms]; COG1132"
                     /db_xref="CDD:440747"
     CDS             1..1304
                     /gene="ABCB1"
                     /coded_by="XM_041466408.1:467..4381"
                     /db_xref="GeneID:121352953"
ORIGIN      
        1 mhsedekkht adgnsheiaa ssqdhesedk qakkkqkkge kpkvvspfal frysswsdkl
       61 lmilgtllai ahgsslpfam iifgdmtdsf vasgdtnftg nismnftsem lhkleedmtr
      121 yayyysgiaa gvllaayiqt sfwtlaagrq ikkirenffh aimrqeigwf dvndvgelnt
      181 rllddvskin egigdkigll vqalttfvtg fivglirgwk ltlvilavsp vlglsaalwa
      241 kvlsaftdke qaayakagav aeevlaairt viafggqeke ikryhknled akrigirkai
      301 tanismgaaf lliyasyala fwygttlils ddytigkvlt vffsvligaf sigqtapsie
      361 afasargaay aifniidnep qidsysetgy kpdhikgnle lknvyfnyps rpdveilkgl
      421 nlkinsgqtv alvggsgcgk sttvqliqrf ydpkegtvti dgqdiktlnv rylrevigvv
      481 nqepvlfatt iaenirygre dvtmeeieka tkeanaydfi mklpnkfetv vgergaqlsg
      541 gqkqriaiar alvrnpkill ldeatsaldt esesvvqaal dkaregrttv vvahrlstvr
      601 nadviavfeg gviteignha ellerkgiyy klvnmqaiea evpssenhen vlpssenyet
      661 vlplsenyen vrsvknrese pdseesltrg lrrrstrrsm kkpgeqndsp deektspaee
      721 ippasflkim klnktewpyf vagtlcaiin galqpafavi fseiigifse tdkdilrkqs
      781 nlysllflvl giisfftfff qgftfgkage iltmrlrfma fkamlrqdma wfdnpknstg
      841 alttrlanda sqvkgatgvr laliaqnvan lgtgilisli ygwqltllll avvpiiavag
      901 miemkmlagh akkdkqelea agkiateaie nirtvvsltr erkfesmyge hlivpyrnsv
      961 kkahifgfcf alsqammfft yagcfrfgay lvvnghmeyk svflvfsavv fgamalgqts
     1021 sfapdyakak isaahlfllf ervpsidsys eegdkpetfe gnitikdvaf nypnrpevki
     1081 lqglnlkvek gqtlalvgss gcgkstvvql lerfydpldg emlfdgktak alniqwlraq
     1141 igivsqepil fdftiaenia ygdnsrqvsh eeivsaakqa nihsfidslp dkyntrvgdk
     1201 gtqlsggqkq riaiaralvr kpqillldea tsaldtesek ivqealdkaq egrtciviah
     1261 rlstiqnadk iavvqngrvi eqgthqqlla ekgvyyslvn vqsg
//
LOCUS       XP_041322343              83 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase subunit NDUFA4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322343
VERSION     XP_041322343.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466409.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..83
                     /product="cytochrome c oxidase subunit NDUFA4"
                     /calculated_mol_wt=9418
     Region          12..80
                     /region_name="B12D"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     pfam06522"
                     /db_xref="CDD:461937"
     CDS             1..83
                     /gene="NDUFA4"
                     /coded_by="XM_041466409.1:288..539"
                     /db_xref="GeneID:121352954"
ORIGIN      
        1 mvlrtvltha kkhpaliplf viigsggvga slylmrlamf npdvswdkkn npepwnkmap
       61 ndqyklfsin mdysrlkkdr pdf
//
LOCUS       XP_041322344             877 aa            linear   VRT 06-MAY-2021
DEFINITION  GATOR complex protein MIOS [Pyrgilauda ruficollis].
ACCESSION   XP_041322344
VERSION     XP_041322344.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466410.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..877
                     /product="GATOR complex protein MIOS"
                     /calculated_mol_wt=98064
     Region          64..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          112..>300
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          116..157
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          189..221
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          228..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          271..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          326..348
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          784..860
                     /region_name="mRING-H2-C3H3C2_Mio"
                     /note="Modified RING finger, H2 subclass (C3H3C2-type),
                     found in WD repeat-containing protein mio and simialr
                     proteins; cd16691"
                     /db_xref="CDD:438352"
     CDS             1..877
                     /gene="MIOS"
                     /coded_by="XM_041466410.1:339..2972"
                     /db_xref="GeneID:121352955"
ORIGIN      
        1 msgskpdilw aphhvdrfvv cdselslyhi dsavsselka gslrlseett atllsinsdt
       61 pymkcvawyp kydpecllav gqangrvvlt slgqdhnsks kdligkefvp kharqcntla
      121 wnpldsnwla agldkhradf svliwdissk yapetavaae kvrlsagdad aglvvtkply
      181 elgqndacls lcwlprdqkl llagmhrnla ifdlrntsqk ifvntkavqg vtvdpyfhdr
      241 vasfyegqva iwdlrkfekp vltlteqpkp ltkvawcptr tgllatltrd sniirlydmq
      301 htptpigdet eptiiersvq pcenyiasfa whptsqnrmv vvtpnrtmsd ftvferisla
      361 wspvtslmwa cgrhlyecte egkasslekd iatkmrlral srygldteqv wrnhllagne
      421 dpqlkslwyt lhfmkqyted mdqkltgnkg plvytgiksi vksslgtten lrhsrsgsdr
      481 qadiiqylse erslalqlcg wikkgtdldv epflssleqe gdweraaava lfnldirrai
      541 qilnkgassg kgdlnlnvva malsgytdek nslwremcst lrlqlnnpyl camfafltse
      601 sgsydgvlye nnvavrdrva fackflndaq lnrfiekltn emkeagnleg illtgltkdg
      661 vdlmesyvdr tgdvqtasyc mlqgspsdvl kdervqywie nyrnlldawr fwhkraefdi
      721 hrskldpssk plaqvfvscn fcgksisysc saiphqgrgf sqygvsgspt kskvtscpgc
      781 rkplprcalc linmgtpvss cpggsksdek vdlskdkkla qfnnwftwch ncrhgghagh
      841 mlswfrdhte cpvsacsckc mqldttgnlv paetvqa
//
LOCUS       XP_041322345             877 aa            linear   VRT 06-MAY-2021
DEFINITION  GATOR complex protein MIOS [Pyrgilauda ruficollis].
ACCESSION   XP_041322345
VERSION     XP_041322345.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466411.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..877
                     /product="GATOR complex protein MIOS"
                     /calculated_mol_wt=98064
     Region          64..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          112..>300
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          116..157
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          189..221
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          228..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          271..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          326..348
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          784..860
                     /region_name="mRING-H2-C3H3C2_Mio"
                     /note="Modified RING finger, H2 subclass (C3H3C2-type),
                     found in WD repeat-containing protein mio and simialr
                     proteins; cd16691"
                     /db_xref="CDD:438352"
     CDS             1..877
                     /gene="MIOS"
                     /coded_by="XM_041466411.1:176..2809"
                     /db_xref="GeneID:121352955"
ORIGIN      
        1 msgskpdilw aphhvdrfvv cdselslyhi dsavsselka gslrlseett atllsinsdt
       61 pymkcvawyp kydpecllav gqangrvvlt slgqdhnsks kdligkefvp kharqcntla
      121 wnpldsnwla agldkhradf svliwdissk yapetavaae kvrlsagdad aglvvtkply
      181 elgqndacls lcwlprdqkl llagmhrnla ifdlrntsqk ifvntkavqg vtvdpyfhdr
      241 vasfyegqva iwdlrkfekp vltlteqpkp ltkvawcptr tgllatltrd sniirlydmq
      301 htptpigdet eptiiersvq pcenyiasfa whptsqnrmv vvtpnrtmsd ftvferisla
      361 wspvtslmwa cgrhlyecte egkasslekd iatkmrlral srygldteqv wrnhllagne
      421 dpqlkslwyt lhfmkqyted mdqkltgnkg plvytgiksi vksslgtten lrhsrsgsdr
      481 qadiiqylse erslalqlcg wikkgtdldv epflssleqe gdweraaava lfnldirrai
      541 qilnkgassg kgdlnlnvva malsgytdek nslwremcst lrlqlnnpyl camfafltse
      601 sgsydgvlye nnvavrdrva fackflndaq lnrfiekltn emkeagnleg illtgltkdg
      661 vdlmesyvdr tgdvqtasyc mlqgspsdvl kdervqywie nyrnlldawr fwhkraefdi
      721 hrskldpssk plaqvfvscn fcgksisysc saiphqgrgf sqygvsgspt kskvtscpgc
      781 rkplprcalc linmgtpvss cpggsksdek vdlskdkkla qfnnwftwch ncrhgghagh
      841 mlswfrdhte cpvsacsckc mqldttgnlv paetvqa
//
LOCUS       XP_041322346            1575 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator GLI3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322346
VERSION     XP_041322346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1575
                     /product="transcriptional activator GLI3"
                     /calculated_mol_wt=171565
     Site            order(527,529,531,533..534,537..538,541,557,559,563..564,
                     567..568,571,587,589,591,593..594,597..598,602)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <544..634
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          550..572
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          580..603
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          611..632
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1575
                     /gene="GLI3"
                     /coded_by="XM_041466412.1:457..5184"
                     /db_xref="GeneID:121352956"
ORIGIN      
        1 meaqshssat tekkkvensi vkcssrtdvs ekavasstts nedespgqty hrerrnaitm
       61 qpqggqglgk iseepstsse eraslikkei hgsishlpep svpyrgtlft mdprngymdp
      121 hyhpphlfpa fhppvpidar hhegryhyep spipplhvps alsssptyse lpflrisphr
      181 npaatsespf stphpyinpy mdyirslhss pslsmisaar glsptdapha gvspaeyyhq
      241 mallagqrsp yadiipsaat agagalhmey lhamdsarfp sprlsarpsr krtlsispls
      301 dhsfdlqtmi rtspnslvti lnnsrssssa sgsyghlsas aispalsfty pptpvslqqm
      361 hqqiisrqqt lgsafghspp lihpaptfpt qrpipgipsv lnpvqvssgp sestqqnkpt
      421 sesavsstgd pmhnkrskik pdedlpspga gsmqeqpegm tlvkeegdkd eskqepevvy
      481 etnchwegcs refdtqeqlv hhinndhihg ekkefvcrwl dcsreqkpfk aqymlvvhmr
      541 rhtgekphkc tfegctkays rlenlkthlr shtgekpyvc ehegcnkafs nasdrakhqn
      601 rthsnekpyv ckipgctkry tdpsslrkhv ktvhgpeahv tkkqrgdihp rpppprdpgs
      661 hsqtrspghq tqgavgeqkd lsnttskree clqvkavkse kpmtsqpspg gqstcsseqs
      721 pisnysnngi eltltgggsv gdlsvidetp imdstistat talglqarrn mtgtkwmeqv
      781 klerlkqvng mlprlnpvpp skaptlppli gngtqsnssc svggsmtilp nrnelsstdi
      841 tvlnmlnrrd sntstissay lssrrssgis pcfssrrssd asqaegrpqn vsvadsydpi
      901 stdasrrsse asqcddlpsl lsltpaqqyr lkakyaaatg gppptplpnm ermslktrma
      961 llgdcresgv splppvnvpr rcsdggangy srrhflshea lgngtrrasd pvrmasdnlp
     1021 vprvqrfnsl nsfstpalpp smekrnlvlq nytrseggvf rgfsspcpps isenvaleaa
     1081 tmeagsslnd edllpddvvq ylnsqnqgmy dhllnnvlds nkmhhssvsg nnnssnfdqa
     1141 ppqssqqagp eanksdlpiq wnevssgssd lspsklkcgq rsvvqqaraf rlhnnmmvqq
     1201 qnlersnmaq qngyqnlmen stsyslqqnm tlssgagnsf smqsnkpyse smgrqammsg
     1261 vtdnscgmav qgqklrisnm pvngnqqnfs hplassdqtt smangmqdrn mmeqeylqsq
     1321 pvrdgiryqg vnqsghmmlg qlsptsqgsl yqgpqscplv shttgsqpsg lsvaksyqsc
     1381 snyssnrrqn vlrnnlsqqq rhvgdgnqty rvntikmemq gqsqqfcsnm qnysgqlydq
     1441 tmgfshqamk tgsffgseas cllqgtaten ssellspgtn qvsstvdsid nnslegvqid
     1501 fdaiiddgdh vslisgalsp siiqnvsrns srlttpqtsl tfpampvstt nmaigdmssl
     1561 ltslaeeskf lavmq
//
LOCUS       XP_041322348            1518 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-binding protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322348
VERSION     XP_041322348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466414.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1518
                     /product="DNA topoisomerase 2-binding protein 1 isoform
                     X1"
                     /calculated_mol_wt=168071
     Region          107..178
                     /region_name="BRCT_TopBP1_rpt1"
                     /note="first BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17737"
                     /db_xref="CDD:349369"
     Region          196..272
                     /region_name="BRCT_TopBP1_rpt2_like"
                     /note="second BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17731"
                     /db_xref="CDD:349363"
     Site            order(205..209,213,229..233,247..248,251,255..256)
                     /site_type="other"
                     /note="Crb2 interaction site [polypeptide binding]"
                     /db_xref="CDD:349363"
     Region          352..434
                     /region_name="BRCT_TopBP1_rpt3"
                     /note="third BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17718"
                     /db_xref="CDD:349350"
     Region          541..624
                     /region_name="BRCT_TopBP1_rpt4"
                     /note="fourth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17749"
                     /db_xref="CDD:349380"
     Region          633..721
                     /region_name="BRCT_TopBP1_rpt5"
                     /note="fifth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd18434"
                     /db_xref="CDD:349387"
     Region          893..963
                     /region_name="BRCT_TopBP1_rpt6"
                     /note="sixth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17727"
                     /db_xref="CDD:349359"
     Region          1263..1336
                     /region_name="BRCT_TopBP1_rpt7"
                     /note="seventh BRCT domain of DNA topoisomerase 2-binding
                     protein 1; cd17738"
                     /db_xref="CDD:349370"
     Site            order(1267..1271,1275,1306,1308..1312)
                     /site_type="other"
                     /note="BACH1 interaction site [polypeptide binding]"
                     /db_xref="CDD:349370"
     Region          1392..1472
                     /region_name="BRCT_TopBP1_rpt8"
                     /note="eighth (C-terminal) BRCT domain of DNA
                     topoisomerase 2-binding protein 1; cd17728"
                     /db_xref="CDD:349360"
     CDS             1..1518
                     /gene="TOPBP1"
                     /coded_by="XM_041466414.1:148..4704"
                     /db_xref="GeneID:121352957"
ORIGIN      
        1 mrsskepffv kfirspgssq yfskalesik efqseehlqi leeaavlsik endkslyicd
       61 pfsgvgfshl kklgcrivgp qvvlycmqsq rcvpraehpv ynmtmadvtv sctslekdvr
      121 eevhkyvqmm ggcvyrdlnv svthliagev gskkylvaas lkkpillpsw vktlwdksqq
      181 gimrytdvnm edyacpvflg cticvtglss sdrkevqrlt aehggqytgq lkmnecthli
      241 vqepkgqkye cakkwnvhcv svqwfsdsik kgfcqdetmy kieagsklsn apststptnd
      301 tskppnhafs dvshisninl sgvnetacss amssrldpvs delenldiss fqaaedlldg
      361 criylcgfsg rkldkmrrli ncgggvrfnq lnedvthviv gdnndelkhf ldktahrphi
      421 vtakwllesf gkgclcpveh yiplnyqqle npileqpgmk svfqkktsll kkdavniikh
      481 qktaeddfls qyvdnysald evekltsfsd vtnstaqgen qpsvcngsla essalaeggl
      541 ffgkrfillg fgeedescma hiikenagev lplqsrtiad yavvpllgct vkatvgdvvt
      601 ntwlitcveq qalldlrsnp lftpvlvmeg atpledcvls fsqftgaerd slaylaellg
      661 arvqeffvrk asakkgmfas thlvvrepng skyeaakkwn lpavtvawll qsartgkrad
      721 eskflvenae aedtesfitq lsktpatvks pdleqpfhll eagkkpvtpl dinrfqskaf
      781 qavishhtgk ttsvaqggpl qkepslnldt pskfltedkf fkpsfdvkda ldaletprgp
      841 eqrtrklstp lsevigrnlk lalassttra aaltaspqla aaqpeveeep kplagaviyv
      901 skklnkrqre lnaiaaslga dyrwcfdetv thfiykggqn dnnkeyksvk ergihivseh
      961 wllesareck rlpeslfpht ynpkmsldis aaqdirlsss ssskplstgk paeeneiipv
     1021 deddaeddvt tdqiketvtv geeqivases kgvltqalem renfqrqlqe lmsatslvkp
     1081 pgqrgslsrs sfdgspatpd sarsvrngrs rvlealrqsr qaladintep sqseqiiwdd
     1141 ptareerarl vsnlqwpdsp sqyleqgqsn tnknmdesal kgfvpdaema giaapeaghg
     1201 dvieslknpi crdpetpvkd nliptpqaps iafplanppv apepkekvvi edekadeere
     1261 klrkfqlssl npqerfdych lieklggivl ekqyfdpsct hivvghplrn ekflasmaag
     1321 kwvlhrsyle acrgagcfvq eedyewgsns ilnvlsginv nqkklalaam rwrkkihkgk
     1381 qetgvvegaf sgwkvilnvd ltkeagfrrl lqsggakvfs ghsaslfkea thlfadfskl
     1441 kpddsrvnva eaaaqgvncl kpeyiadyli qdppppmesy clpeaesylq nnsdleigas
     1501 qkrkalgemn rvkrsrih
//
LOCUS       XP_041322349            1518 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-binding protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322349
VERSION     XP_041322349.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466415.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1518
                     /product="DNA topoisomerase 2-binding protein 1 isoform
                     X1"
                     /calculated_mol_wt=168071
     Region          107..178
                     /region_name="BRCT_TopBP1_rpt1"
                     /note="first BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17737"
                     /db_xref="CDD:349369"
     Region          196..272
                     /region_name="BRCT_TopBP1_rpt2_like"
                     /note="second BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17731"
                     /db_xref="CDD:349363"
     Site            order(205..209,213,229..233,247..248,251,255..256)
                     /site_type="other"
                     /note="Crb2 interaction site [polypeptide binding]"
                     /db_xref="CDD:349363"
     Region          352..434
                     /region_name="BRCT_TopBP1_rpt3"
                     /note="third BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17718"
                     /db_xref="CDD:349350"
     Region          541..624
                     /region_name="BRCT_TopBP1_rpt4"
                     /note="fourth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17749"
                     /db_xref="CDD:349380"
     Region          633..721
                     /region_name="BRCT_TopBP1_rpt5"
                     /note="fifth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd18434"
                     /db_xref="CDD:349387"
     Region          893..963
                     /region_name="BRCT_TopBP1_rpt6"
                     /note="sixth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17727"
                     /db_xref="CDD:349359"
     Region          1263..1336
                     /region_name="BRCT_TopBP1_rpt7"
                     /note="seventh BRCT domain of DNA topoisomerase 2-binding
                     protein 1; cd17738"
                     /db_xref="CDD:349370"
     Site            order(1267..1271,1275,1306,1308..1312)
                     /site_type="other"
                     /note="BACH1 interaction site [polypeptide binding]"
                     /db_xref="CDD:349370"
     Region          1392..1472
                     /region_name="BRCT_TopBP1_rpt8"
                     /note="eighth (C-terminal) BRCT domain of DNA
                     topoisomerase 2-binding protein 1; cd17728"
                     /db_xref="CDD:349360"
     CDS             1..1518
                     /gene="TOPBP1"
                     /coded_by="XM_041466415.1:24..4580"
                     /db_xref="GeneID:121352957"
ORIGIN      
        1 mrsskepffv kfirspgssq yfskalesik efqseehlqi leeaavlsik endkslyicd
       61 pfsgvgfshl kklgcrivgp qvvlycmqsq rcvpraehpv ynmtmadvtv sctslekdvr
      121 eevhkyvqmm ggcvyrdlnv svthliagev gskkylvaas lkkpillpsw vktlwdksqq
      181 gimrytdvnm edyacpvflg cticvtglss sdrkevqrlt aehggqytgq lkmnecthli
      241 vqepkgqkye cakkwnvhcv svqwfsdsik kgfcqdetmy kieagsklsn apststptnd
      301 tskppnhafs dvshisninl sgvnetacss amssrldpvs delenldiss fqaaedlldg
      361 criylcgfsg rkldkmrrli ncgggvrfnq lnedvthviv gdnndelkhf ldktahrphi
      421 vtakwllesf gkgclcpveh yiplnyqqle npileqpgmk svfqkktsll kkdavniikh
      481 qktaeddfls qyvdnysald evekltsfsd vtnstaqgen qpsvcngsla essalaeggl
      541 ffgkrfillg fgeedescma hiikenagev lplqsrtiad yavvpllgct vkatvgdvvt
      601 ntwlitcveq qalldlrsnp lftpvlvmeg atpledcvls fsqftgaerd slaylaellg
      661 arvqeffvrk asakkgmfas thlvvrepng skyeaakkwn lpavtvawll qsartgkrad
      721 eskflvenae aedtesfitq lsktpatvks pdleqpfhll eagkkpvtpl dinrfqskaf
      781 qavishhtgk ttsvaqggpl qkepslnldt pskfltedkf fkpsfdvkda ldaletprgp
      841 eqrtrklstp lsevigrnlk lalassttra aaltaspqla aaqpeveeep kplagaviyv
      901 skklnkrqre lnaiaaslga dyrwcfdetv thfiykggqn dnnkeyksvk ergihivseh
      961 wllesareck rlpeslfpht ynpkmsldis aaqdirlsss ssskplstgk paeeneiipv
     1021 deddaeddvt tdqiketvtv geeqivases kgvltqalem renfqrqlqe lmsatslvkp
     1081 pgqrgslsrs sfdgspatpd sarsvrngrs rvlealrqsr qaladintep sqseqiiwdd
     1141 ptareerarl vsnlqwpdsp sqyleqgqsn tnknmdesal kgfvpdaema giaapeaghg
     1201 dvieslknpi crdpetpvkd nliptpqaps iafplanppv apepkekvvi edekadeere
     1261 klrkfqlssl npqerfdych lieklggivl ekqyfdpsct hivvghplrn ekflasmaag
     1321 kwvlhrsyle acrgagcfvq eedyewgsns ilnvlsginv nqkklalaam rwrkkihkgk
     1381 qetgvvegaf sgwkvilnvd ltkeagfrrl lqsggakvfs ghsaslfkea thlfadfskl
     1441 kpddsrvnva eaaaqgvncl kpeyiadyli qdppppmesy clpeaesylq nnsdleigas
     1501 qkrkalgemn rvkrsrih
//
LOCUS       XP_041322350            1492 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-binding protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322350
VERSION     XP_041322350.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466416.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1492
                     /product="DNA topoisomerase 2-binding protein 1 isoform
                     X2"
                     /calculated_mol_wt=165364
     Region          107..178
                     /region_name="BRCT_TopBP1_rpt1"
                     /note="first BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17737"
                     /db_xref="CDD:349369"
     Region          196..272
                     /region_name="BRCT_TopBP1_rpt2_like"
                     /note="second BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17731"
                     /db_xref="CDD:349363"
     Site            order(205..209,213,229..233,247..248,251,255..256)
                     /site_type="other"
                     /note="Crb2 interaction site [polypeptide binding]"
                     /db_xref="CDD:349363"
     Region          352..434
                     /region_name="BRCT_TopBP1_rpt3"
                     /note="third BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17718"
                     /db_xref="CDD:349350"
     Region          541..624
                     /region_name="BRCT_TopBP1_rpt4"
                     /note="fourth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17749"
                     /db_xref="CDD:349380"
     Region          633..721
                     /region_name="BRCT_TopBP1_rpt5"
                     /note="fifth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd18434"
                     /db_xref="CDD:349387"
     Region          893..963
                     /region_name="BRCT_TopBP1_rpt6"
                     /note="sixth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17727"
                     /db_xref="CDD:349359"
     Region          1237..1310
                     /region_name="BRCT_TopBP1_rpt7"
                     /note="seventh BRCT domain of DNA topoisomerase 2-binding
                     protein 1; cd17738"
                     /db_xref="CDD:349370"
     Site            order(1241..1245,1249,1280,1282..1286)
                     /site_type="other"
                     /note="BACH1 interaction site [polypeptide binding]"
                     /db_xref="CDD:349370"
     Region          1366..1446
                     /region_name="BRCT_TopBP1_rpt8"
                     /note="eighth (C-terminal) BRCT domain of DNA
                     topoisomerase 2-binding protein 1; cd17728"
                     /db_xref="CDD:349360"
     CDS             1..1492
                     /gene="TOPBP1"
                     /coded_by="XM_041466416.1:299..4777"
                     /db_xref="GeneID:121352957"
ORIGIN      
        1 mrsskepffv kfirspgssq yfskalesik efqseehlqi leeaavlsik endkslyicd
       61 pfsgvgfshl kklgcrivgp qvvlycmqsq rcvpraehpv ynmtmadvtv sctslekdvr
      121 eevhkyvqmm ggcvyrdlnv svthliagev gskkylvaas lkkpillpsw vktlwdksqq
      181 gimrytdvnm edyacpvflg cticvtglss sdrkevqrlt aehggqytgq lkmnecthli
      241 vqepkgqkye cakkwnvhcv svqwfsdsik kgfcqdetmy kieagsklsn apststptnd
      301 tskppnhafs dvshisninl sgvnetacss amssrldpvs delenldiss fqaaedlldg
      361 criylcgfsg rkldkmrrli ncgggvrfnq lnedvthviv gdnndelkhf ldktahrphi
      421 vtakwllesf gkgclcpveh yiplnyqqle npileqpgmk svfqkktsll kkdavniikh
      481 qktaeddfls qyvdnysald evekltsfsd vtnstaqgen qpsvcngsla essalaeggl
      541 ffgkrfillg fgeedescma hiikenagev lplqsrtiad yavvpllgct vkatvgdvvt
      601 ntwlitcveq qalldlrsnp lftpvlvmeg atpledcvls fsqftgaerd slaylaellg
      661 arvqeffvrk asakkgmfas thlvvrepng skyeaakkwn lpavtvawll qsartgkrad
      721 eskflvenae aedtesfitq lsktpatvks pdleqpfhll eagkkpvtpl dinrfqskaf
      781 qavishhtgk ttsvaqggpl qkepslnldt pskfltedkf fkpsfdvkda ldaletprgp
      841 eqrtrklstp lsevigrnlk lalassttra aaltaspqla aaqpeveeep kplagaviyv
      901 skklnkrqre lnaiaaslga dyrwcfdetv thfiykggqn dnnkeyksvk ergihivseh
      961 wllesareck rlpeslfpht ynpkmsldis aaqdirlsss ssskplstgk paeeneiipv
     1021 deddaeddvt tdqiketvtv geeqivases kgvltqalem renfqrqlqe lmsatslvkp
     1081 pgqrgslsrs sfdgspatpd sarsvrngrs rvlealrqsr qaladintep sqseqiiwdd
     1141 ptareerarl vsnlqwpdsp sqyleqaape aghgdviesl knpicrdpet pvkdnliptp
     1201 qapsiafpla nppvapepke kvviedekad eereklrkfq lsslnpqerf dychlieklg
     1261 givlekqyfd pscthivvgh plrnekflas maagkwvlhr syleacrgag cfvqeedyew
     1321 gsnsilnvls ginvnqkkla laamrwrkki hkgkqetgvv egafsgwkvi lnvdltkeag
     1381 frrllqsgga kvfsghsasl fkeathlfad fsklkpddsr vnvaeaaaqg vnclkpeyia
     1441 dyliqdpppp mesyclpeae sylqnnsdle igasqkrkal gemnrvkrsr ih
//
LOCUS       XP_041322351            1460 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA topoisomerase 2-binding protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322351
VERSION     XP_041322351.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466417.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1460
                     /product="DNA topoisomerase 2-binding protein 1 isoform
                     X3"
                     /calculated_mol_wt=162035
     Region          107..178
                     /region_name="BRCT_TopBP1_rpt1"
                     /note="first BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17737"
                     /db_xref="CDD:349369"
     Region          196..272
                     /region_name="BRCT_TopBP1_rpt2_like"
                     /note="second BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17731"
                     /db_xref="CDD:349363"
     Site            order(205..209,213,229..233,247..248,251,255..256)
                     /site_type="other"
                     /note="Crb2 interaction site [polypeptide binding]"
                     /db_xref="CDD:349363"
     Region          352..434
                     /region_name="BRCT_TopBP1_rpt3"
                     /note="third BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17718"
                     /db_xref="CDD:349350"
     Region          541..624
                     /region_name="BRCT_TopBP1_rpt4"
                     /note="fourth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17749"
                     /db_xref="CDD:349380"
     Region          633..721
                     /region_name="BRCT_TopBP1_rpt5"
                     /note="fifth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd18434"
                     /db_xref="CDD:349387"
     Region          835..905
                     /region_name="BRCT_TopBP1_rpt6"
                     /note="sixth BRCT domain of DNA topoisomerase 2-binding
                     protein 1 (TopBP1) and similar proteins; cd17727"
                     /db_xref="CDD:349359"
     Region          1205..1278
                     /region_name="BRCT_TopBP1_rpt7"
                     /note="seventh BRCT domain of DNA topoisomerase 2-binding
                     protein 1; cd17738"
                     /db_xref="CDD:349370"
     Site            order(1209..1213,1217,1248,1250..1254)
                     /site_type="other"
                     /note="BACH1 interaction site [polypeptide binding]"
                     /db_xref="CDD:349370"
     Region          1334..1414
                     /region_name="BRCT_TopBP1_rpt8"
                     /note="eighth (C-terminal) BRCT domain of DNA
                     topoisomerase 2-binding protein 1; cd17728"
                     /db_xref="CDD:349360"
     CDS             1..1460
                     /gene="TOPBP1"
                     /coded_by="XM_041466417.1:299..4681"
                     /db_xref="GeneID:121352957"
ORIGIN      
        1 mrsskepffv kfirspgssq yfskalesik efqseehlqi leeaavlsik endkslyicd
       61 pfsgvgfshl kklgcrivgp qvvlycmqsq rcvpraehpv ynmtmadvtv sctslekdvr
      121 eevhkyvqmm ggcvyrdlnv svthliagev gskkylvaas lkkpillpsw vktlwdksqq
      181 gimrytdvnm edyacpvflg cticvtglss sdrkevqrlt aehggqytgq lkmnecthli
      241 vqepkgqkye cakkwnvhcv svqwfsdsik kgfcqdetmy kieagsklsn apststptnd
      301 tskppnhafs dvshisninl sgvnetacss amssrldpvs delenldiss fqaaedlldg
      361 criylcgfsg rkldkmrrli ncgggvrfnq lnedvthviv gdnndelkhf ldktahrphi
      421 vtakwllesf gkgclcpveh yiplnyqqle npileqpgmk svfqkktsll kkdavniikh
      481 qktaeddfls qyvdnysald evekltsfsd vtnstaqgen qpsvcngsla essalaeggl
      541 ffgkrfillg fgeedescma hiikenagev lplqsrtiad yavvpllgct vkatvgdvvt
      601 ntwlitcveq qalldlrsnp lftpvlvmeg atpledcvls fsqftgaerd slaylaellg
      661 arvqeffvrk asakkgmfas thlvvrepng skyeaakkwn lpavtvawll qsartgkrad
      721 eskflvenae aedtesfitq lsktpatvks pdleqpfhll eagkkpvtpl dinrfqskaf
      781 qavishhtgk ttsvaqggpl qkepslnldt pskfltedkf fkpsfdvkee epkplagavi
      841 yvskklnkrq relnaiaasl gadyrwcfde tvthfiykgg qndnnkeyks vkergihivs
      901 ehwllesare ckrlpeslfp htynpkmsld isaaqdirls ssssskplst gkpaeeneii
      961 pvdeddaedd vttdqiketv tvgeeqivas eskgvltqal emrenfqrql qelmsatslv
     1021 kppgqrgsls rssfdgspat pdsarsvrng rsrvlealrq srqaladint epsqseqiiw
     1081 ddptareera rlvsnlqwpd spsqyleqgq sntnknmdes alkgfvpdae magiaapeag
     1141 hgdvieslkn picrdpetpv kdnliptpqa psiafplanp pvapepkekv viedekadee
     1201 reklrkfqls slnpqerfdy chlieklggi vlekqyfdps cthivvghpl rnekflasma
     1261 agkwvlhrsy leacrgagcf vqeedyewgs nsilnvlsgi nvnqkklala amrwrkkihk
     1321 gkqetgvveg afsgwkviln vdltkeagfr rllqsggakv fsghsaslfk eathlfadfs
     1381 klkpddsrvn vaeaaaqgvn clkpeyiady liqdppppme syclpeaesy lqnnsdleig
     1441 asqkrkalge mnrvkrsrih
//
LOCUS       XP_041322352             249 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CDV3 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322352
VERSION     XP_041322352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466418.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="protein CDV3 homolog isoform X1"
                     /calculated_mol_wt=26486
     Region          80..202
                     /region_name="CDV3"
                     /note="Carnitine deficiency-associated protein 3;
                     pfam15359"
                     /db_xref="CDD:464669"
     CDS             1..249
                     /gene="CDV3"
                     /coded_by="XM_041466418.1:183..932"
                     /db_xref="GeneID:121352958"
ORIGIN      
        1 maeteersld dffakrdkkk rkekssrsaa aaaassasna gsnaagatag tprptegggs
       61 gaaaassaag gssakaaske eddwkefeqk eeidysglrv qsmqiseked desekreepg
      121 dsweetgsgg svdrssgpwn ksapapapvv epivteapep vqtggvyrpp gareggrprr
      181 vqqgppeiys dtqfpslqst aklvdsrkdk emeksfevvk yktrgrdevs knqalklqld
      241 nqyavlgdq
//
LOCUS       XP_041322353             215 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CDV3 homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322353
VERSION     XP_041322353.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466419.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="protein CDV3 homolog isoform X2"
                     /calculated_mol_wt=22453
     Region          80..202
                     /region_name="CDV3"
                     /note="Carnitine deficiency-associated protein 3;
                     pfam15359"
                     /db_xref="CDD:464669"
     CDS             1..215
                     /gene="CDV3"
                     /coded_by="XM_041466419.1:181..828"
                     /db_xref="GeneID:121352958"
ORIGIN      
        1 maeteersld dffakrdkkk rkekssrsaa aaaassasna gsnaagatag tprptegggs
       61 gaaaassaag gssakaaske eddwkefeqk eeidysglrv qsmqiseked desekreepg
      121 dsweetgsgg svdrssgpwn ksapapapvv epivteapep vqtggvyrpp gareggrprr
      181 vqqgppeiys dtqfpslqst aklvdsrnlt tysls
//
LOCUS       XP_041322354             209 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CDV3 homolog isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322354
VERSION     XP_041322354.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466420.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="protein CDV3 homolog isoform X3"
                     /calculated_mol_wt=21865
     Region          80..202
                     /region_name="CDV3"
                     /note="Carnitine deficiency-associated protein 3;
                     pfam15359"
                     /db_xref="CDD:464669"
     CDS             1..209
                     /gene="CDV3"
                     /coded_by="XM_041466420.1:177..806"
                     /db_xref="GeneID:121352958"
ORIGIN      
        1 maeteersld dffakrdkkk rkekssrsaa aaaassasna gsnaagatag tprptegggs
       61 gaaaassaag gssakaaske eddwkefeqk eeidysglrv qsmqiseked desekreepg
      121 dsweetgsgg svdrssgpwn ksapapapvv epivteapep vqtggvyrpp gareggrprr
      181 vqqgppeiys dtqfpslqst aklvdsrky
//
LOCUS       XP_041322355             208 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CDV3 homolog isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322355
VERSION     XP_041322355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466421.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="protein CDV3 homolog isoform X4"
                     /calculated_mol_wt=21701
     Region          80..202
                     /region_name="CDV3"
                     /note="Carnitine deficiency-associated protein 3;
                     pfam15359"
                     /db_xref="CDD:464669"
     CDS             1..208
                     /gene="CDV3"
                     /coded_by="XM_041466421.1:181..807"
                     /db_xref="GeneID:121352958"
ORIGIN      
        1 maeteersld dffakrdkkk rkekssrsaa aaaassasna gsnaagatag tprptegggs
       61 gaaaassaag gssakaaske eddwkefeqk eeidysglrv qsmqiseked desekreepg
      121 dsweetgsgg svdrssgpwn ksapapapvv epivteapep vqtggvyrpp gareggrprr
      181 vqqgppeiys dtqfpslqst aklvdsrk
//
LOCUS       XP_041322356             259 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 3B [Pyrgilauda ruficollis].
ACCESSION   XP_041322356
VERSION     XP_041322356.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466422.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="leucine-rich repeat-containing protein 3B"
                     /calculated_mol_wt=29180
     Region          33..68
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          48..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          69..125
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          90..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          115..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..259
                     /gene="LRRC3B"
                     /coded_by="XM_041466422.1:293..1072"
                     /db_xref="GeneID:121352959"
ORIGIN      
        1 mhlvdlwltr slsmclllqs fvlmilcfhs asmcpkgclc shsgglnvsc snanlkeipr
       61 dlppetvlly ldsnqitsip neifkdlhql rvlnlskngi efidehafkg vaetlqtldl
      121 sdnriksvhk nafnnlkara riannpwhcd ctlqqvlrsm asnhetannv icktsvldeh
      181 agrpflnaan dadlcnlpkk ttdyamlvtm fgwftmvisy vvyyvrqnqe darrhleylk
      241 slpsrqkkpd eaddistvv
//
LOCUS       XP_041322358             259 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 3B [Pyrgilauda ruficollis].
ACCESSION   XP_041322358
VERSION     XP_041322358.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466424.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="leucine-rich repeat-containing protein 3B"
                     /calculated_mol_wt=29180
     Region          33..68
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          48..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          69..125
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          90..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          115..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..259
                     /gene="LRRC3B"
                     /coded_by="XM_041466424.1:318..1097"
                     /db_xref="GeneID:121352959"
ORIGIN      
        1 mhlvdlwltr slsmclllqs fvlmilcfhs asmcpkgclc shsgglnvsc snanlkeipr
       61 dlppetvlly ldsnqitsip neifkdlhql rvlnlskngi efidehafkg vaetlqtldl
      121 sdnriksvhk nafnnlkara riannpwhcd ctlqqvlrsm asnhetannv icktsvldeh
      181 agrpflnaan dadlcnlpkk ttdyamlvtm fgwftmvisy vvyyvrqnqe darrhleylk
      241 slpsrqkkpd eaddistvv
//
LOCUS       XP_041322359             259 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 3B [Pyrgilauda ruficollis].
ACCESSION   XP_041322359
VERSION     XP_041322359.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466425.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="leucine-rich repeat-containing protein 3B"
                     /calculated_mol_wt=29180
     Region          33..68
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          48..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          69..125
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          90..113
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          115..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..259
                     /gene="LRRC3B"
                     /coded_by="XM_041466425.1:185..964"
                     /db_xref="GeneID:121352959"
ORIGIN      
        1 mhlvdlwltr slsmclllqs fvlmilcfhs asmcpkgclc shsgglnvsc snanlkeipr
       61 dlppetvlly ldsnqitsip neifkdlhql rvlnlskngi efidehafkg vaetlqtldl
      121 sdnriksvhk nafnnlkara riannpwhcd ctlqqvlrsm asnhetannv icktsvldeh
      181 agrpflnaan dadlcnlpkk ttdyamlvtm fgwftmvisy vvyyvrqnqe darrhleylk
      241 slpsrqkkpd eaddistvv
//
LOCUS       XP_041322360             591 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322360
VERSION     XP_041322360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..591
                     /product="LIM domain-containing protein 1"
                     /calculated_mol_wt=63150
     Region          <83..357
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          387..440
                     /region_name="LIM1_Ajuba_like"
                     /note="The first LIM domain of Ajuba-like proteins;
                     cd09352"
                     /db_xref="CDD:188738"
     Site            order(387,390,409,412,415,418,436,439)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188738"
     Region          452..504
                     /region_name="LIM2_Ajuba_like"
                     /note="The second LIM domain of Ajuba-like proteins;
                     cd09355"
                     /db_xref="CDD:188741"
     Site            order(452,455,472,475,478,481,500,503)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188741"
     Region          512..573
                     /region_name="LIM3_Ajuba_like"
                     /note="The third LIM domain of Ajuba-like proteins;
                     cd09438"
                     /db_xref="CDD:188822"
     Site            order(512,515,539,542,545,548,569,572)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188822"
     CDS             1..591
                     /gene="LIMD1"
                     /coded_by="XM_041466426.1:132..1907"
                     /db_xref="GeneID:121352960"
ORIGIN      
        1 mdkyddlgle askfiedlnm yeaskdglfr vdkaagnnpe feetrrvfat kmakihlqqq
       61 qqqqqqeeml maamnggaaa fqpprpsppv argskpppaa egprarpceg gergfgesgt
      121 raeaagsqag rrgweaepdr iprvggsqpg agrgeqqags pgdpqpcrgg qenggegrrg
      181 vggrdpvpag qrsssfsnag tpsvgqeepp pqqrcssfsa psaqptrgfs gsaepcgpka
      241 ggdgsqpwyq gvslsfppgs apaapsveyq haaaypspas hfvahgqthr pagssgnpep
      301 gssrlasrgm vapnapqmlf pegvsgprsd sghldgssta kvklpcqtll pqpeqgpsaa
      361 elklealtqr leqemdarpk adyfgtcvkc skgvyganqa cqamgnlyhd scftcgacsr
      421 klrgkafyfv ngkvfceedf lysgfqqsad rcficghlim dmilqalgks yhpgcfrcvi
      481 cnecldgvpf tvdsenkiyc vrdyhkvlap kcaacglpil psegsdetir vvsmdkdyhv
      541 ecyhcedcgm elndedghrc ypldehllch schlkhieng ttpaaayqhh y
//
LOCUS       XP_041322361            1611 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase HECW1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322361
VERSION     XP_041322361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466427.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1611
                     /product="E3 ubiquitin-protein ligase HECW1 isoform X1"
                     /calculated_mol_wt=181420
     Region          66..182
                     /region_name="HECW_N"
                     /note="N-terminal domain of E3 ubiquitin-protein ligase
                     HECW1 and 2; pfam16562"
                     /db_xref="CDD:465177"
     Region          206..342
                     /region_name="C2_NEDL1-like"
                     /note="C2 domain present in NEDL1 (NEDD4-like ubiquitin
                     protein ligase-1); cd08691"
                     /db_xref="CDD:176073"
     Region          <685..715
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     Region          839..868
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          953..1019
                     /region_name="HECW1_helix"
                     /note="Helical box domain of E3 ubiquitin-protein ligase
                     HECW1; pfam18436"
                     /db_xref="CDD:465766"
     Region          1025..1056
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(1040,1051)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          1255..1609
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(1261,1292,1303,1364,1538,1573..1574,1577..1581,1601,
                     1608)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(1392,1395..1396,1398..1399,1402,1408,1410,
                     1414..1415,1417,1422,1427,1444,1448)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1611
                     /gene="HECW1"
                     /coded_by="XM_041466427.1:145..4980"
                     /db_xref="GeneID:121352961"
ORIGIN      
        1 mscaqagivq nlyqnrflgl aamaspsrns qnrrrckepl rysynpeqfh nmdirnnshe
       61 tvtiprstsd tdlvtsdsrs tlmvsssyys ighsqdlviy wdikeevdag dwigmylide
      121 vlsenfldyk nrgvngshrg qiiwkidass yfvepetkic fkyyhgvsga lrattpsvtv
      181 knnaapifks itnedsvqgq gsrrlisfsl sdfqafglkk gmffnpdpyl kisiqpgkhs
      241 ifpalphhgq ekrskiicnt vnpiwqgeqf sfvslptdvl eievkdkfak srpiikrflg
      301 klsmpvqrll erhaigdrvv sytlgrrlpt dhvsgqlqfr feitssihpd deevsisadp
      361 epadlpespv nnpteeslge ppcintvtse saapeqlngy slnsvdspga vklpgevdqn
      421 slneelagdg evdavpvpep lesipgevlp slsatdlmeq ldltacmspp epevrennkv
      481 nsgiqgdggv ltsietvdid evsadvhagk dleksqdeee egasaqeeed nklqlrttak
      541 rknrpcslpv seletviasa cgepetprth yirihnllhs lpsaqmssdg eeeqdggngr
      601 endeestvke vmdkevvses etmaaepple neaeenfsqs tvppgtldeq lsdlndglld
      661 gepprtgses esssrpngdn eceacdtscy spscystscy stscystscy stscydsnnr
      721 fsshtrfssv dsakisestv fssqdddeee nsafesvpds vqspeldreq vdgssqwpde
      781 lvahggnpqr ategldtpva gpssrregdc pllhnsqpvs qlpslrpdhh hyptideplp
      841 pnwearidsh grvfyvdhvn rtttwqrpta aatpdgihrs gsiqqmeqln rryqniqrti
      901 aterteddvv vnnrvervpt gggsdseaep sqpspeirre gslspvnsqk itlllqspav
      961 kfitnpefft vlhanysayr vftnstclkh milkirrdar nferyqhnrd lvnfinmfad
     1021 trlelprgwe iktdqqgksf fvdhnsratt fidpriplqn grlpnhlthr qhlqrlrsys
     1081 ageasevsrn rgvtllarpg nslvtairnq hhhealplay ndkivaflrq pnifemlqer
     1141 qpslarnhal rekihyirte gthgleklsc dadlvillsl feedimsyip lqaafhpgys
     1201 fsprcspcss pqnspglqra sarapspyrr dfeaklrnfy rkleakgygq gpgkikliir
     1261 rdhllegtfn qvmaysrkel qrnklyvtfv geegldysgp srefffllsq elfnpyyglf
     1321 eysandtytv qispmsafve nhlewfrfsg rilglalihq ylldafftrp fykallrlpc
     1381 dlsdleylde efhqslqwmk dnnitdildl tftvneevfg qvterelksg gantavtekn
     1441 kkeyiermvk wrvergvvqq tealvrgfye vvdsrlvsvf darelelvia gtaeidlndw
     1501 rnnteyrggy hdghivirwf waaverfnne qrlrllqfvt gtssvpyegf aalrgsnglr
     1561 rfciekwgki tslprahtcf nrldlppyps ysmlyekllt aveetstfgl e
//
LOCUS       XP_041322362            1555 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase HECW1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322362
VERSION     XP_041322362.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466428.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1555
                     /product="E3 ubiquitin-protein ligase HECW1 isoform X2"
                     /calculated_mol_wt=175280
     Region          44..160
                     /region_name="HECW_N"
                     /note="N-terminal domain of E3 ubiquitin-protein ligase
                     HECW1 and 2; pfam16562"
                     /db_xref="CDD:465177"
     Region          184..320
                     /region_name="C2_NEDL1-like"
                     /note="C2 domain present in NEDL1 (NEDD4-like ubiquitin
                     protein ligase-1); cd08691"
                     /db_xref="CDD:176073"
     Region          <663..693
                     /region_name="Keratin_B2_2"
                     /note="Keratin, high sulfur B2 protein; pfam13885"
                     /db_xref="CDD:464017"
     Region          785..812
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          897..963
                     /region_name="HECW1_helix"
                     /note="Helical box domain of E3 ubiquitin-protein ligase
                     HECW1; pfam18436"
                     /db_xref="CDD:465766"
     Region          969..1000
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(984,995)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          1199..1553
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(1205,1236,1247,1308,1482,1517..1518,1521..1525,1545,
                     1552)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(1336,1339..1340,1342..1343,1346,1352,1354,
                     1358..1359,1361,1366,1371,1388,1392)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1555
                     /gene="HECW1"
                     /coded_by="XM_041466428.1:16..4683"
                     /db_xref="GeneID:121352961"
ORIGIN      
        1 maspsrnsqn rrrckeplry synpeqfhnm dirnnshetv tiprstsdtd lvtsdsrstl
       61 mvsssyysig hsqdlviywd ikeevdagdw igmylidevl senfldyknr gvngshrgqi
      121 iwkidassyf vepetkicfk yyhgvsgalr attpsvtvkn naapifksit nedsvqgqgs
      181 rrlisfslsd fqafglkkgm ffnpdpylki siqpgkhsif palphhgqek rskiicntvn
      241 piwqgeqfsf vslptdvlei evkdkfaksr piikrflgkl smpvqrller haigdrvvsy
      301 tlgrrlptdh vsgqlqfrfe itssihpdde evsisadpep adlpespvnn pteeslgepp
      361 cintvtsesa apeqlngysl nsvdspgavk lpgevdqnsl neelagdgev davpvpeple
      421 sipgevlpsl satdlmeqld ltacmsppep evrennkvns giqgdggvlt sietvdidev
      481 sadvhagkdl eksqdeeeeg asaqeeednk lqlrttakrk nrpcslpvse letviasacg
      541 epetprthyi rihnllhslp saqmssdgee eqdggngren deestvkevm dkevvseset
      601 maaepplene aeenfsqstv ppgtldeqls dlndglldge pprtgseses ssrpngdnec
      661 eacdtscysp scystscyst scystscyst scydsnnrfs shtrfssvds akisestvfs
      721 sqdddeeens afesvpdsvq speldreqvd gssqwpdelv ahggnpqrat egldtpvagp
      781 ssrredwear idshgrvfyv dhvnrtttwq rptaaatpdg ihrsgsiqqm eqlnrryqni
      841 qrtiaterte ddvvvnnrve rvptgggsds eaepsqpspe irregslspv nsqkitlllq
      901 spavkfitnp efftvlhany sayrvftnst clkhmilkir rdarnferyq hnrdlvnfin
      961 mfadtrlelp rgweiktdqq gksffvdhns rattfidpri plqngrlpnh lthrqhlqrl
     1021 rsysagease vsrnrgvtll arpgnslvta irnqhhheal playndkiva flrqpnifem
     1081 lqerqpslar nhalrekihy irtegthgle klscdadlvi llslfeedim syiplqaafh
     1141 pgysfsprcs pcsspqnspg lqrasaraps pyrrdfeakl rnfyrkleak gygqgpgkik
     1201 liirrdhlle gtfnqvmays rkelqrnkly vtfvgeegld ysgpsrefff llsqelfnpy
     1261 yglfeysand tytvqispms afvenhlewf rfsgrilgla lihqylldaf ftrpfykall
     1321 rlpcdlsdle yldeefhqsl qwmkdnnitd ildltftvne evfgqvtere lksggantav
     1381 teknkkeyie rmvkwrverg vvqqtealvr gfyevvdsrl vsvfdarele lviagtaeid
     1441 lndwrnntey rggyhdghiv irwfwaaver fnneqrlrll qfvtgtssvp yegfaalrgs
     1501 nglrrfciek wgkitslpra htcfnrldlp pypsysmlye klltaveets tfgle
//
LOCUS       XP_041322363             408 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase 17A [Pyrgilauda ruficollis].
ACCESSION   XP_041322363
VERSION     XP_041322363.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466429.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="serine/threonine-protein kinase 17A"
                     /calculated_mol_wt=46098
     Region          42..312
                     /region_name="STKc_DRAK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Death-associated protein kinase-Related Apoptosis-inducing
                     protein Kinase 1; cd14197"
                     /db_xref="CDD:271099"
     Site            order(58..62,64,66,79,81,113,129..130,132,136,138,177,179,
                     181..182,184,197..198,201,216..219)
                     /site_type="active"
                     /db_xref="CDD:271099"
     Site            order(58..62,64,66,79,81,113,129..130,132,136,181..182,
                     184,197..198)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271099"
     Site            order(62,136,138,177,179,181,201,216..219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271099"
     Site            197..219
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271099"
     CDS             1..408
                     /gene="STK17A"
                     /coded_by="XM_041466429.1:157..1383"
                     /db_xref="GeneID:121352962"
ORIGIN      
        1 mspdekpqpg rsrgdrpppp qpaagrsrrr ggllaeirtp irtepfqery slspgrelgr
       61 gkfavvkkci qkdterefaa kfmrkrrkgq dcrmeiihei avlelaqcnl wvinlhevye
      121 tatemilvle yaaggeifdq cvaereeafk ekdvkrlmkq ilegvsflhr nnvvhldlkp
      181 qnilltsksp lgdikivdfg lsrimkssee lreimgtpey vapeilsydp istatdmwsi
      241 gvlayvmltg ispflgddkq etflnisqmn vsysgedfdl vsesavdfik tllvkkpedr
      301 ataeeclqhp wleqsdnpac rawnkstege tsdaiqkdgd saseqsedte ktgeeesivt
      361 eelivvasyt lgqcrqseke kvteqkaisk rfkfeepllq eipgefiy
//
LOCUS       XP_041322364             327 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322364
VERSION     XP_041322364.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466430.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="palmitoyltransferase ZDHHC3 isoform X1"
                     /calculated_mol_wt=36798
     Region          128..255
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..327
                     /gene="ZDHHC3"
                     /coded_by="XM_041466430.1:689..1672"
                     /db_xref="GeneID:121352963"
ORIGIN      
        1 mmitplhrfr diertpeylq pekcvpppsh aslgtmwfir dgcgiacavv twmlvfyadf
       61 vvllvmlvps rdyvysving tlfntlafla lashframlt dpgavpkgna tkefieslql
      121 kpgqvvykcp kccsikpdra hhcsvckrci rkmdhhcpwv nncvgennqk yfvlftmyia
      181 lislhalimv gfhflycfee dwtkcssfsp pttvillill cfeallflif tsvmfgtqvh
      241 sictdetgie rlknqkptwe kisgwegmkl afggafslgw fnpfsnlnce spvpaeaaaa
      301 apaseimtqe eieqflardv aiqmlhe
//
LOCUS       XP_041322365             299 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322365
VERSION     XP_041322365.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466431.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="palmitoyltransferase ZDHHC3 isoform X2"
                     /calculated_mol_wt=34072
     Region          128..255
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     CDS             1..299
                     /gene="ZDHHC3"
                     /coded_by="XM_041466431.1:681..1580"
                     /db_xref="GeneID:121352963"
ORIGIN      
        1 mmitplhrfr diertpeylq pekcvpppsh aslgtmwfir dgcgiacavv twmlvfyadf
       61 vvllvmlvps rdyvysving tlfntlafla lashframlt dpgavpkgna tkefieslql
      121 kpgqvvykcp kccsikpdra hhcsvckrci rkmdhhcpwv nncvgennqk yfvlftmyia
      181 lislhalimv gfhflycfee dwtkcssfsp pttvillill cfeallflif tsvmfgtqvh
      241 sictdetgie qlkkeerrwa kktkwmnmka vfghpfsiaw lspfatpdqg kadpyqyvv
//
LOCUS       XP_041322366             306 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine zipper transcription factor-like protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322366
VERSION     XP_041322366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="leucine zipper transcription factor-like protein
                     1 isoform X1"
                     /calculated_mol_wt=35378
     Region          29..301
                     /region_name="Leu_zip"
                     /note="Leucine zipper; pfam15294"
                     /db_xref="CDD:464620"
     CDS             1..306
                     /gene="LZTFL1"
                     /coded_by="XM_041466432.1:106..1026"
                     /db_xref="GeneID:121352965"
ORIGIN      
        1 mkvkteekik aelgvnehhq nevvsymrfa rfkrgmclkt vdscfqdlkd srlveetftv
       61 devidmldgl qsvvhseves elinttytnv lllrqlfsqa ekwylklqtd vsdlenrell
      121 dqvaefekse ytssnkksta epikpklapl negesellnk tvahlqeene klktrlrtie
      181 tqataaldek sklekslrdl qmiqgdqknn anqditelen kvaalksqfe ktlndttanq
      241 kfleenlvtt khdllkvqdq lstaekelek kfqqtaayrn mkeiltkkne qikdlrrrls
      301 kyesed
//
LOCUS       XP_041322367             297 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine zipper transcription factor-like protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322367
VERSION     XP_041322367.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466433.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..297
                     /product="leucine zipper transcription factor-like protein
                     1 isoform X2"
                     /calculated_mol_wt=34294
     Region          20..292
                     /region_name="Leu_zip"
                     /note="Leucine zipper; pfam15294"
                     /db_xref="CDD:464620"
     CDS             1..297
                     /gene="LZTFL1"
                     /coded_by="XM_041466433.1:63..956"
                     /db_xref="GeneID:121352965"
ORIGIN      
        1 maelgvnehh qnevvsymrf arfkrgmclk tvdscfqdlk dsrlveetft vdevidmldg
       61 lqsvvhseve selinttytn vlllrqlfsq aekwylklqt dvsdlenrel ldqvaefeks
      121 eytssnkkst aepikpklap lnegeselln ktvahlqeen eklktrlrti etqataalde
      181 ksklekslrd lqmiqgdqkn nanqditele nkvaalksqf ektlndttan qkfleenlvt
      241 tkhdllkvqd qlstaekele kkfqqtaayr nmkeiltkkn eqikdlrrrl skyesed
//
LOCUS       XP_041322368             298 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A11 [Pyrgilauda ruficollis].
ACCESSION   XP_041322368
VERSION     XP_041322368.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466434.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="homeobox protein Hox-A11"
                     /calculated_mol_wt=33436
     Region          26..152
                     /region_name="DUF3528"
                     /note="Protein of unknown function (DUF3528); pfam12045"
                     /db_xref="CDD:432284"
     Region          227..283
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..298
                     /gene="HOXA11"
                     /coded_by="XM_041466434.1:539..1435"
                     /db_xref="GeneID:121352966"
ORIGIN      
        1 mmdfdervpc ssnmylpsct yyvsgpdfss lpsflpqtps srpmtysyss nlpqvqpvre
       61 vtfreyaidp sskwhprnnl phcysaeeim hrdclpatnt asmgemfgkn tanvyhpstn
      121 vssnfystvg rngvlpqafd qffetaygta enlasadypv dksgekapaa agaaaaatss
      181 seggcgraaa taaekerrrr pesssspess sgnneeksgs ssgqrtrkkr cpytkyqire
      241 lerefffsvy inkekrlqls rmlnltdrqv kiwfqnrrmk ekkinrdrlq yysanpll
//
LOCUS       XP_041322369             262 aa            linear   VRT 06-MAY-2021
DEFINITION  retinitis pigmentosa 9 protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322369
VERSION     XP_041322369.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466435.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="retinitis pigmentosa 9 protein isoform X1"
                     /calculated_mol_wt=30181
     CDS             1..262
                     /gene="RP9"
                     /coded_by="XM_041466435.1:108..896"
                     /db_xref="GeneID:121352967"
ORIGIN      
        1 maqraprgqg qdeeegaeee aaargsqara rshaepaasg grsqdrherk rkrqeaqqlq
       61 kiqhlesfye kpppgliken etkpedcipd vpgnesaref lahaptkglw mplgkevkvm
      121 qcwrckrygh rtgdkecpff ikgnqkleqf rveikplvit lhflfsilka hedpmydiir
      181 enkrhekekr iqqlkqlled stsesdssdd sdeddedsss stssehkhkk kkrkkekkkk
      241 ekkkkkkrkr kssksndksg sd
//
LOCUS       XP_041322371             245 aa            linear   VRT 06-MAY-2021
DEFINITION  retinitis pigmentosa 9 protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322371
VERSION     XP_041322371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466437.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="retinitis pigmentosa 9 protein isoform X2"
                     /calculated_mol_wt=28187
     CDS             1..245
                     /gene="RP9"
                     /coded_by="XM_041466437.1:102..839"
                     /db_xref="GeneID:121352967"
ORIGIN      
        1 maqraprgqg qdeeegaeee aaargsqara rshaepaasg grsqdrherk rkrqeaqqlq
       61 kiqhlesfye kpppgliken etkpedcipd vpgnesaref lahaptkglw mplgkevkvm
      121 qcwrckrygh rtgdkecpff ikgnqkleqf rvahedpmyd iirenkrhek ekriqqlkql
      181 ledstsesds sddsdedded sssstssehk hkkkkrkkek kkkekkkkkk rkrkssksnd
      241 ksgsd
//
LOCUS       XP_041322372             366 aa            linear   VRT 06-MAY-2021
DEFINITION  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322372
VERSION     XP_041322372.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466438.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="glycoprotein-N-acetylgalactosamine
                     3-beta-galactosyltransferase 1 isoform X1"
                     /calculated_mol_wt=42380
     Region          108..>249
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..366
                     /gene="C1GALT1"
                     /coded_by="XM_041466438.1:432..1532"
                     /db_xref="GeneID:121352968"
ORIGIN      
        1 masskslmnl ltftfgsaig ffvcyllfsi ileeqvkiqp hvlhndphgq hsadtdnnql
       61 qgqmnfnada gqhkdedkni aeglyhkvki lcwvmtgpqn lekkakhvka twaqrcnkvl
      121 fmsseenkdf pavgletkeg rdqlywktik afqyvydhyf ddadwfmkad ddtyvildnl
      181 rwllskyspe qpiyfgrrfk pyvkqgymsg gagyvlskea lkrfvaafkt nkcthsssie
      241 dlalgkcmei inveagdsrd trgretfhpf vpehhlirgy lpktfwywny nyypavegpg
      301 ccsdlavsfh yvdsvtmyhl eyliyhlrpy gylyrynpds sknpeeqskn ealennqklk
      361 qktses
//
LOCUS       XP_041322373             409 aa            linear   VRT 06-MAY-2021
DEFINITION  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322373
VERSION     XP_041322373.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466439.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="glycoprotein-N-acetylgalactosamine
                     3-beta-galactosyltransferase 1 isoform X2"
                     /calculated_mol_wt=47290
     Region          151..>292
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..409
                     /gene="C1GALT1"
                     /coded_by="XM_041466439.1:96..1325"
                     /db_xref="GeneID:121352968"
ORIGIN      
        1 mrkeepnlps sspvlwivtr lvsvwllasy aevpcfdvsh lqemassksl mnlltftfgs
       61 aigffvcyll fsiileeqvk iqphvlhndp hgqhsadtdn nqlqgqmnfn adagqhkded
      121 kniaeglyhk vkilcwvmtg pqnlekkakh vkatwaqrcn kvlfmsseen kdfpavglet
      181 kegrdqlywk tikafqyvyd hyfddadwfm kadddtyvil dnlrwllsky speqpiyfgr
      241 rfkpyvkqgy msggagyvls kealkrfvaa fktnkcthss siedlalgkc meiinveagd
      301 srdtrgretf hpfvpehhli rgylpktfwy wnynyypave gpgccsdlav sfhyvdsvtm
      361 yhleyliyhl rpygylyryn pdssknpeeq sknealennq klkqktses
//
LOCUS       XP_041322374             707 aa            linear   VRT 06-MAY-2021
DEFINITION  protein-glutamine gamma-glutamyltransferase 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322374
VERSION     XP_041322374.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466440.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="protein-glutamine gamma-glutamyltransferase 4"
                     /calculated_mol_wt=79364
     Region          14..122
                     /region_name="Transglut_N"
                     /note="Transglutaminase family; pfam00868"
                     /db_xref="CDD:459971"
     Region          262..353
                     /region_name="TGc"
                     /note="Transglutaminase/protease-like homologues;
                     smart00460"
                     /db_xref="CDD:214673"
     Region          496..596
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     Region          610..706
                     /region_name="Transglut_C"
                     /note="Transglutaminase family, C-terminal ig like domain;
                     pfam00927"
                     /db_xref="CDD:460002"
     CDS             1..707
                     /gene="TGM4"
                     /coded_by="XM_041466440.1:142..2265"
                     /db_xref="GeneID:121352969"
ORIGIN      
        1 mfsstdtslt vtgvdllksq nsrqhhtdgy niknlvvrrg qpfqvqvsls relraadkls
       61 lrfgigenpm knrgsllslk peredfngwk islverngke cllsvtsspn apvgkynlhv
      121 ktgtntykpe ngviyllfnp wceddvvyma neaekeeyvl ndtgyiyvgs aysiydrpwn
      181 fgqfeefvld acmylldksk lslaerrdpa hvsramsalv nanddsgvll gnwsgnyisg
      241 tspmdwigsv tilqkyyktk kpvrygqcwv fagvlntvmr clgvpcrcvs tfdsahdtee
      301 nlrvdvylnd kgeklnslsl dsvwnfhvwn dawmkrtdip ngfsgwqaid atpqeqsqgr
      361 fqcgpcpvka vregdvylpy dakfvyaevn adrvywlvkk vngkdkyfrv gtetqaigkn
      421 istkavgqnr reditreyky pegskeerms mqraysfirp sglvprsgya stmqiqgant
      481 qplvmkepvt ktglhleisn teplhpgnpl emaitvkisa pgnwtvdltg scqlqyytgk
      541 vqanlgtike tinlegpsem qipmkiapda ymktlstved evlilvtaia evketndklt
      601 ketsmrfeyp pitvqmpeta rlyndfncaf ifknklnval enckllvegl gifkmttfel
      661 gdimpgriik seivctptrl gdkkivakli snqikgiste kgvfite
//
LOCUS       XP_041322375             561 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane glycoprotein NMB [Pyrgilauda ruficollis].
ACCESSION   XP_041322375
VERSION     XP_041322375.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466441.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..561
                     /product="transmembrane glycoprotein NMB"
                     /calculated_mol_wt=61625
     Region          263..>317
                     /region_name="PKD"
                     /note="Repeats in polycystic kidney disease 1 (PKD1) and
                     other proteins; smart00089"
                     /db_xref="CDD:214510"
     Region          409..459
                     /region_name="PKAT_KLD"
                     /note="PKAT, KLD domain; pfam20433"
                     /db_xref="CDD:466582"
     CDS             1..561
                     /gene="GPNMB"
                     /coded_by="XM_041466441.1:48..1733"
                     /db_xref="GeneID:121352970"
ORIGIN      
        1 mgaarrplgl lllaqallct aatrfqdvmn hgstspvtsy kklqgwssdq nkwneklypf
       61 weegdprwkd cwkggrvtak ldsdspalvg snvsfvvtlq fpkcqtedsd gnivyrrnct
      121 rdppaavdqq vyvynwtewt dncgwencts nhshhvfpdg rpfphhpgwr rrnfvyvfht
      181 fgqyyqttgr ssakfsvnta nitlgehgms vsiyrrghsg fvpvaraktt ysvtdkipli
      241 vsmfqkhdrn vsdsifikds pitfdvkihd psyylnnsai sykwnfgdgs glfvasgsst
      301 shtytlqgnf tlnltvqaii pvpcrpvtpt appptsavtt glssdsdssp tvesvednpd
      361 ggchisrngy ygssiavveg ilevniiqmt siqmtesqae nslvdfvvtc qgslptdvct
      421 avsdptcqvs ksvvcdpvvv tdeclltirr afeepgtyci nitlgddtsq alasalisvn
      481 ggassgtteg vfiflgllav fatigaflly krykqykpie rsaeqtekqe gftayfstfk
      541 aiffpnster npllkskpgi v
//
LOCUS       XP_041322376            1391 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF15 [Pyrgilauda ruficollis].
ACCESSION   XP_041322376
VERSION     XP_041322376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466442.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1391
                     /product="kinesin-like protein KIF15"
                     /calculated_mol_wt=159578
     Region          25..373
                     /region_name="KISc_KLP2_like"
                     /note="Kinesin motor domain, KIF15-like subgroup; cd01373"
                     /db_xref="CDD:276824"
     Site            order(34,109,112,114..117,265)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276824"
     Site            order(316,319,322)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276824"
     Region          520..>1373
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1391
                     /gene="KIF15"
                     /coded_by="XM_041466442.1:44..4219"
                     /db_xref="GeneID:121352971"
ORIGIN      
        1 mapgergdlg dssisllnss svegdaikvf vrvrppsesa altdgehglc lsvlssntir
       61 lhskpepkif tfdcvanmqt tqesvfssva knivescmng yngtifaygq tgsgktftmm
      121 gpsdsdnfth slrgviprsf eylffliere kekagsgksf lckcsfieiy neqifdllds
      181 asaglflreh ikkgvfvdga veqvvssaae ayqvltmgwr nrrvastsmn ressrshavf
      241 titvesmekn nevvnirssl lnlvdlagse rqkdthtegl rlkeagninr slsclaqvit
      301 alvdvgngkq rhicyrdskl tfllrdslgg naktciianv hpgskcfget lstlnfaqra
      361 kliknkavvn edtqgnvnql qaevkklkeq lakltsvpsa ssisvsqgkn ntnymnnfle
      421 amlfwekseg ekknllekva qleelcakke kfvqsnkmiv kfrehhivrl erlhkeaggm
      481 llpkeqddll sdlreevqil reqmeqhpri akyamenhnl reenkklrsl qsvkkaqeid
      541 aqtiaeleka fleasateks tkghrlhstt vsvegnslas verlkahllq tqaelatskq
      601 eyeefkeltk kkqmelesel qslqkanqhl enileatkah krqevsqlhk lhreslksit
      661 tptrayqlrs rlvprispdy nfedfqysee mmddirkepv ptemseqace amaeelkvaq
      721 eqlstmqtkl deeesknmkl qqhinklehh saqiqellss erndwskerq elleqiksle
      781 kqlqesqnna dlltsevhdl rivlqsadke lsdvkleysa frekqekeis qlsgrhmdvq
      841 fqldsvrleh erileekasl qddydnlqev akfetdqlkq qledqkqeae amktelsnll
      901 qllktekehn ekltlqlqeg kennskellk vlekgqvekp fsevvtqceq qeaklrtleq
      961 elaaaeetia slkktndtdk evvtdlmrqi qelrssinhk tesidgltre ledinckyni
     1021 vlaakeestg iiedqekkie elkealegre isdnierdll ceelrhtadq ltslteaskk
     1081 hhallqcaqe diakkeaviq elreqlvkmt eelenrksey elkmkqidcf vdsssfpqcp
     1141 ktppnfdvnl aklletheqe iadrrasain lehlvhelne errakndeil rlkeqlnele
     1201 nlrlemqilv ennrslqslv eaqrpnknsd qkhpdvqylk ekeeeiaeer laknkaveem
     1261 lkikaeleet knilriqeks cremtlemer trtlelkafn ekeeirskle eayeerdrie
     1321 keikllrkqv hslaeengkl lghqnlnqki qylvklkkdy aklteetekl rventflkes
     1381 kkcdvcrhnq r
//
LOCUS       XP_041322377             647 aa            linear   VRT 06-MAY-2021
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 15 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322377
VERSION     XP_041322377.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466443.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..647
                     /product="polypeptide N-acetylgalactosaminyltransferase
                     15"
                     /calculated_mol_wt=73337
     Region          205..504
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(209..211,213,242,271,274,278,294..296,377..378,
                     400..401,403,428,431,436)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(294,296,428)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          513..636
                     /region_name="beta-trefoil_Ricin_GALNT15"
                     /note="ricin B-type lectin domain, beta-trefoil fold,
                     found in polypeptide N-acetylgalactosaminyltransferase 15
                     (GALNT15) and similar proteins; cd23442"
                     /db_xref="CDD:467320"
     Site            order(530..533,543,545,548,552..553)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467320"
     Site            order(573..576,580,582,585,592..593)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467320"
     Site            order(613..616,624,626,629,633..634)
                     /site_type="other"
                     /note="putative sugar binding site [chemical binding]"
                     /db_xref="CDD:467320"
     CDS             1..647
                     /gene="GALNT15"
                     /coded_by="XM_041466443.1:130..2073"
                     /db_xref="GeneID:121352972"
ORIGIN      
        1 mrrqlqlasm flrkkcrygs rklqflllfl mlgflllmvt mlnpppsnqs kegtfqpvef
       61 npregyqmdf vetqemletq eesqqyypld glspfislre delimavvsp tgkrnhskar
      121 kgyrvvkqqs rrpegraegg pespplslpl qegqgaaage rplglethgf nevlserial
      181 rrdlpevrhp lclqqkydss lptasviicf hdeawstllr tvhsimdtap kaflkdiilv
      241 ddlsqqgplk salseyiskl dgvklirsnk rlgvirgrml gaaratgdvl ifmdshcecq
      301 kgwlepllar lsssrnsvvs pvidvidwkt fqyyhsvgvh rgvfdwkldf hwepvpehee
      361 kvrqspispi rspavagavv amdrhyfqnt gaydsdmttw gaenlelsir twlcggsvei
      421 ipcsrvghvy rnhfprafsy eeaivrnkir iaetwlgsfk enfykhdtva fliskaekpd
      481 cserlqlqkr lgcrnfqwfl snvypelsqp gdtprfsgkl yntgvgfcad yrpgrataeg
      541 sielspcsds ptqhfeynmk eillgsapll cfdvrhgkvi pqnctkatdn snqhwdvqed
      601 gmivhvlsgk cieaaksede kdlflcacnk nanqvwefer sqglrqr
//
LOCUS       XP_041322379             350 aa            linear   VRT 06-MAY-2021
DEFINITION  cell division cycle-associated 7-like protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322379
VERSION     XP_041322379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466445.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="cell division cycle-associated 7-like protein"
                     /calculated_mol_wt=39706
     Region          241..339
                     /region_name="zf-4CXXC_R1"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; pfam10497"
                     /db_xref="CDD:463117"
     CDS             1..350
                     /gene="CDCA7L"
                     /coded_by="XM_041466445.1:307..1359"
                     /db_xref="GeneID:121352973"
ORIGIN      
        1 mvesdlsdee hdnllsneke eeeemkkkvs pkrrsfglrv alqfptrkss ekkvpeqals
       61 dlpvkdsesl tplkrsdkve gsaseseedi ketqeessna llkrainike nkamlaqlla
      121 elnsipdlfp vkmpsstpsk qkktprrtfs egqitrrmnp trtarppenf alekftvsav
      181 rlaehicsyr qqnllkrlsv qgdcgvrkrr rtskysshrp vediteedld niaitvrdki
      241 ydkvlgstch qcrqkttdtk ticrkqgcgg vrgqfcgpcl rnrygedvks alldpawicp
      301 pcrgvcncsy crrrdgrcat gmlihlarfy gynnvkeyle slqkqladdn
//
LOCUS       XP_041322380             350 aa            linear   VRT 06-MAY-2021
DEFINITION  cell division cycle-associated 7-like protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322380
VERSION     XP_041322380.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466446.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="cell division cycle-associated 7-like protein"
                     /calculated_mol_wt=39706
     Region          241..339
                     /region_name="zf-4CXXC_R1"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; pfam10497"
                     /db_xref="CDD:463117"
     CDS             1..350
                     /gene="CDCA7L"
                     /coded_by="XM_041466446.1:286..1338"
                     /db_xref="GeneID:121352973"
ORIGIN      
        1 mvesdlsdee hdnllsneke eeeemkkkvs pkrrsfglrv alqfptrkss ekkvpeqals
       61 dlpvkdsesl tplkrsdkve gsaseseedi ketqeessna llkrainike nkamlaqlla
      121 elnsipdlfp vkmpsstpsk qkktprrtfs egqitrrmnp trtarppenf alekftvsav
      181 rlaehicsyr qqnllkrlsv qgdcgvrkrr rtskysshrp vediteedld niaitvrdki
      241 ydkvlgstch qcrqkttdtk ticrkqgcgg vrgqfcgpcl rnrygedvks alldpawicp
      301 pcrgvcncsy crrrdgrcat gmlihlarfy gynnvkeyle slqkqladdn
//
LOCUS       XP_041322381             350 aa            linear   VRT 06-MAY-2021
DEFINITION  cell division cycle-associated 7-like protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322381
VERSION     XP_041322381.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466447.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="cell division cycle-associated 7-like protein"
                     /calculated_mol_wt=39706
     Region          241..339
                     /region_name="zf-4CXXC_R1"
                     /note="Zinc-finger domain of monoamine-oxidase A repressor
                     R1; pfam10497"
                     /db_xref="CDD:463117"
     CDS             1..350
                     /gene="CDCA7L"
                     /coded_by="XM_041466447.1:280..1332"
                     /db_xref="GeneID:121352973"
ORIGIN      
        1 mvesdlsdee hdnllsneke eeeemkkkvs pkrrsfglrv alqfptrkss ekkvpeqals
       61 dlpvkdsesl tplkrsdkve gsaseseedi ketqeessna llkrainike nkamlaqlla
      121 elnsipdlfp vkmpsstpsk qkktprrtfs egqitrrmnp trtarppenf alekftvsav
      181 rlaehicsyr qqnllkrlsv qgdcgvrkrr rtskysshrp vediteedld niaitvrdki
      241 ydkvlgstch qcrqkttdtk ticrkqgcgg vrgqfcgpcl rnrygedvks alldpawicp
      301 pcrgvcncsy crrrdgrcat gmlihlarfy gynnvkeyle slqkqladdn
//
LOCUS       XP_041322382             358 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322382
VERSION     XP_041322382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466448.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="C-C chemokine receptor type 4"
                     /calculated_mol_wt=41552
     Region          42..316
                     /region_name="7tmA_Chemokine_R"
                     /note="classical and atypical chemokine receptors, member
                     of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd14984"
                     /db_xref="CDD:341319"
     Region          42..68
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341319"
     Site            order(47,96,99,115,118..119,188..193,200,203..204,259,266,
                     269,280,284,287..288,291)
                     /site_type="other"
                     /note="chemokine binding site [polypeptide binding]"
                     /db_xref="CDD:341319"
     Region          75..100
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341319"
     Region          111..141
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341319"
     Region          155..175
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341319"
     Region          200..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341319"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341319"
     Region          284..309
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341319"
     CDS             1..358
                     /gene="CCR4"
                     /coded_by="XM_041466448.1:280..1356"
                     /db_xref="GeneID:121352974"
ORIGIN      
        1 msssstesle vepstfyeyy dsyydapklc skegvrrfaa sflpllyslv flvgltgnil
       61 vivvlfkykr lksmtdvyll nlaisdllfv lslpfwsyft vdqwvfgtpw ckiiswiylv
      121 gfysgiffim lmsidrylai vravlslkar ttfhglitsl vvwlvalsas vpelvfresf
      181 nehnfttckp rfpgnfttwk lfstlevnil gllipfiimt fcysmiiktl vhcrndkknk
      241 avkmifvvmi vffffwtpyn iviflqllef mgvikdcqvs rsldyafqvt eilglfhccl
      301 npviyffmge kfkkylkmlf knwqlpgyfc kwcgvhityh testssfhtq stgdqdal
//
LOCUS       XP_041322383             105 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c [Pyrgilauda ruficollis].
ACCESSION   XP_041322383
VERSION     XP_041322383.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466449.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..105
                     /product="cytochrome c"
                     /calculated_mol_wt=11452
     Region          2..100
                     /region_name="Cyc7"
                     /note="Cytochrome c2 [Energy production and conversion];
                     COG3474"
                     /db_xref="CDD:442697"
     CDS             1..105
                     /gene="LOC121352975"
                     /coded_by="XM_041466449.1:165..482"
                     /db_xref="GeneID:121352975"
ORIGIN      
        1 mgdvekgkki fvqkcsqcht vekggkhktg pnlnglfgrk tgqaegfsyt danknkgitw
       61 gedtlmeyle npkkyipgtk mifagikkkg eradliaylk vatak
//
LOCUS       XP_041322384             467 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 108 [Pyrgilauda ruficollis].
ACCESSION   XP_041322384
VERSION     XP_041322384.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466450.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="transmembrane protein 108"
                     /calculated_mol_wt=50001
     Region          <61..467
                     /region_name="TMEM108"
                     /note="TMEM108 family; pfam15759"
                     /db_xref="CDD:464851"
     CDS             1..467
                     /gene="TMEM108"
                     /coded_by="XM_041466450.1:148..1551"
                     /db_xref="GeneID:121352976"
ORIGIN      
        1 mifsgvllil alteelvfsv qvlsptvsss qgfpmnttti tamgttphhk dhhtaeplpt
       61 saqamshpis lvekapstgq eqesgprige ketyhlynqs alysgqsrpk gkifqvfkgn
      121 fsestepylk ttlhspfptl rspftdhpfq sqttassdpn gmglartths dpsphrntsg
      181 slreaergdg tevvvqeadf atttagpstd peavsvpfkp thygmwdmls knnswvtlnl
      241 stnvplfags gsataasghs vqtsfdvsis spsagdpegl tptqhsavtn atspgsalss
      301 vpatrlssst stagstatgn flnrlvpagt wkpgvqgnis hvtegdkpqh raticlskmd
      361 iawiilaisv pisscsvllt vccmrrkkkt snpennlsyw nnaitmdyfn rhavelprei
      421 qsletsedhl seprspangd yrdsgmvlvn pfcqetlfvg heqvsei
//
LOCUS       XP_041322385             206 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 196 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322385
VERSION     XP_041322385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="transmembrane protein 196 isoform X1"
                     /calculated_mol_wt=22050
     CDS             1..206
                     /gene="TMEM196"
                     /coded_by="XM_041466451.1:219..839"
                     /db_xref="GeneID:121352977"
ORIGIN      
        1 mctssqiigs llvlsvleig lgvssvavga vsfslvlteh kpqlgdsspf llcgvcgilc
       61 akkksglvmi lfsaccicgl iggilnfqfl raltkkssal yslhlasmsl acigiggctl
      121 sswltcrlas yeqrrmfser ehslhhshem aekrlrgiei tdlpscpvip ptpelpprsa
      181 hkpelmqfqr ttsqtstdai nalyvv
//
LOCUS       XP_041322386             179 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 196 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322386
VERSION     XP_041322386.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466452.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="transmembrane protein 196 isoform X2"
                     /calculated_mol_wt=19059
     CDS             1..179
                     /gene="TMEM196"
                     /coded_by="XM_041466452.1:209..748"
                     /db_xref="GeneID:121352977"
ORIGIN      
        1 mctssqiigs llvlsvleig lgvssvavga vsfslvlteh kpqlgdsspf llcgvcgilc
       61 akkksglvmi lfsaccicgl iggilnfqfl raltkkssal yslhlasmsl acigiggctl
      121 sswltcrlas yeqrrmfser ehslhhshem aekrlrgiei tdlpscpvip ptpelpprk
//
LOCUS       XP_041322389             173 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 196 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322389
VERSION     XP_041322389.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466455.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..173
                     /product="transmembrane protein 196 isoform X3"
                     /calculated_mol_wt=18345
     CDS             1..173
                     /gene="TMEM196"
                     /coded_by="XM_041466455.1:225..746"
                     /db_xref="GeneID:121352977"
ORIGIN      
        1 mctssqiigs llvlsvleig lgvssvavga vsfslvlteh kpqlgdsspf llcgvcgilc
       61 akkksglvmi lfsaccicgl iggilnfqfl raltkkssal yslhlasmsl acigiggctl
      121 sswltcrlas yeqrrmfser ehslhhshem aekemtdnls nggphliyng svy
//
LOCUS       XP_041322390             544 aa            linear   VRT 06-MAY-2021
DEFINITION  glucocorticoid-induced transcript 1 protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322390
VERSION     XP_041322390.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466456.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..544
                     /product="glucocorticoid-induced transcript 1 protein
                     isoform X1"
                     /calculated_mol_wt=57825
     Region          163..473
                     /region_name="FAM117"
                     /note="Protein Family FAM117; pfam15388"
                     /db_xref="CDD:464695"
     CDS             1..544
                     /gene="GLCCI1"
                     /coded_by="XM_041466456.1:10..1644"
                     /db_xref="GeneID:121352978"
ORIGIN      
        1 mssssssqtp pshhqpppqr mrrgaagspt agtaggpgng agggsagtsr llqpiratvp
       61 yqllrgnqhs ptrspsasvg sntgpggggg rgggsppppp satpplaagg ggaepgrvkg
      121 rqrrspesgg srrsssperr spsspvyrvd rpksqqirts gtirrtssld titgpyltgq
      181 wprdphvhyp scmkdkstqt pscwadegae krshqrsasw gsadqlkeqi aklrqqlqrs
      241 kqssrhskek erhsplhgnh iaisqtqaci srsvpmplss isvpksaasr vpcnvegisp
      301 elekvfiken sgkeevskpl dipdgrrapl pahyrssstr sidtqtpsvq erssscsshs
      361 pcvspfcppe sqdgspcste dllydrdkds gsssplpkya sspkpnnsym fkreppegce
      421 rvkvfeemss rqpvsaplfs cpdknkvnfi ptgsafcpvk llgpllpasd ltlknspnsg
      481 qstglstltv eqlssrvsfs slsddtstmd spetpvqqps qqqqpllqei qteehsspqs
      541 yvli
//
LOCUS       XP_041322391             543 aa            linear   VRT 06-MAY-2021
DEFINITION  glucocorticoid-induced transcript 1 protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322391
VERSION     XP_041322391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..543
                     /product="glucocorticoid-induced transcript 1 protein
                     isoform X2"
                     /calculated_mol_wt=57697
     Region          163..472
                     /region_name="FAM117"
                     /note="Protein Family FAM117; pfam15388"
                     /db_xref="CDD:464695"
     CDS             1..543
                     /gene="GLCCI1"
                     /coded_by="XM_041466457.1:10..1641"
                     /db_xref="GeneID:121352978"
ORIGIN      
        1 mssssssqtp pshhqpppqr mrrgaagspt agtaggpgng agggsagtsr llqpiratvp
       61 yqllrgnqhs ptrspsasvg sntgpggggg rgggsppppp satpplaagg ggaepgrvkg
      121 rqrrspesgg srrsssperr spsspvyrvd rpksqqirts gtirrtssld titgpyltgq
      181 wprdphvhyp scmkdkstqt pscwadegae krshqrsasw gsadqlkeia klrqqlqrsk
      241 qssrhskeke rhsplhgnhi aisqtqacis rsvpmplssi svpksaasrv pcnvegispe
      301 lekvfikens gkeevskpld ipdgrraplp ahyrssstrs idtqtpsvqe rssscsshsp
      361 cvspfcppes qdgspcsted llydrdkdsg sssplpkyas spkpnnsymf kreppegcer
      421 vkvfeemssr qpvsaplfsc pdknkvnfip tgsafcpvkl lgpllpasdl tlknspnsgq
      481 stglstltve qlssrvsfss lsddtstmds petpvqqpsq qqqpllqeiq teehsspqsy
      541 vli
//
LOCUS       XP_041322392            1319 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase ULK4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322392
VERSION     XP_041322392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1319
                     /product="serine/threonine-protein kinase ULK4 isoform X1"
                     /calculated_mol_wt=147006
     Region          17..293
                     /region_name="STKc_ULK4"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Unc-51-like kinase 4; cd14010"
                     /db_xref="CDD:270912"
     Site            order(24..28,32,45,47,73,89..92,96,98,135,137,139..140,
                     142,153,156,194..197)
                     /site_type="active"
                     /db_xref="CDD:270912"
     Site            order(24..28,32,45,47,73,89..92,96,135,137,139..140,142,
                     153)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270912"
     Site            order(28,96,98,135,137,139,156,194..197)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270912"
     Site            order(152..166,191..197)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270912"
     CDS             1..1319
                     /gene="ULK4"
                     /coded_by="XM_041466458.1:10..3969"
                     /db_xref="GeneID:121352979"
ORIGIN      
        1 mpcfqsvace tsesmenfvl yeeigrgnat vvykgrrkgt infvaivcsd kckragvsnw
       61 vrltqglthk nimtfyewye tsnhlwlvve lctggslecl iaqdeclped vvrefgidlv
      121 tglyhihkhg iiycelkpgk illegsgtlk fssfcrarad gedlekvfal agaeegedin
      181 entlqryfkn ivqdfpfyta peaikgdnfc kasdlwslgc llyemfsgkp pflsesrsel
      241 iekilsedpl rpgpessafh rpsaefisll dgllqkdpqk rlnwtdllqh pfwkgslshc
      301 gvgsadrqst slsredtess vfcsakesvd dhentdnpss sraglkppcn sfkietqtel
      361 rpksvvdges nesifllssr ptprtnsave vcdaatvpik nssqgdswlk kaenvcssqq
      421 dmesklkeli ytesdlvvtp iidnakimkq vpvrfdpktl hipahsvekl ssmkdvdwnn
      481 fvkrvcslle ssekntgaar sklnllyylc tlvvhkeian rlissqlfpi liqqlrtaan
      541 wdiraniarv igllashtse leenvpvsea itlltelire nfrnsklkqc flpalgelly
      601 liaskeekge hprecwavps aaytvlmrcl regeervvnh iaakiienvc ttrschaqgf
      661 itgeigpvlw ylfthstgds lkitpisalc ritrsspnaf qsviekvglt ailnslangi
      721 ckiqqymltm fsamlscgih lqrliqekdf vttitrlles pstfirakaf lvllqvlinn
      781 remlllscqt rlmmyierds rktmpgkeqq ggseylskcl dlliyhivqe lpgilgdils
      841 alanvsgrkh pstvqakqlk mclpmmpvvl hlvtsqvfrp qivtkeflfn ygilvefirs
      901 idsgetildr aigqaaseel ikttlltfea vtehpsllmt hrvtvedsiv pplislvhsh
      961 nvewrlfslr llsettsvll shevvgeekg eslnsnnkll slirdlllpq yehillapdp
     1021 vpmyalkllv alterspasv slleeihlfp vlfqvilryq dsilgntmqt vvallnniva
     1081 nksmnmmilf qeglthhvcn llteavalyl eaddkrstkt anvlllslld ilqymltyta
     1141 nivrqtlqaq ksgaggdtqa aedlllinkp ltdltsqliq llpsddteif lsasqsllll
     1201 vqlyggsnqe smspenmdsf aevlkskedp relklllkiv krlitsnkkh leslkndgda
     1261 liqaleslvq tarcsadqip ddaiedccdt vsshvdtava slafeilrav gheniktpk
//
LOCUS       XP_041322393            1300 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase ULK4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322393
VERSION     XP_041322393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1300
                     /product="serine/threonine-protein kinase ULK4 isoform X2"
                     /calculated_mol_wt=144955
     Region          17..293
                     /region_name="STKc_ULK4"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Unc-51-like kinase 4; cd14010"
                     /db_xref="CDD:270912"
     Site            order(24..28,32,45,47,73,89..92,96,98,135,137,139..140,
                     142,153,156,194..197)
                     /site_type="active"
                     /db_xref="CDD:270912"
     Site            order(24..28,32,45,47,73,89..92,96,135,137,139..140,142,
                     153)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270912"
     Site            order(28,96,98,135,137,139,156,194..197)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270912"
     Site            order(152..166,191..197)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270912"
     CDS             1..1300
                     /gene="ULK4"
                     /coded_by="XM_041466459.1:9..3911"
                     /db_xref="GeneID:121352979"
ORIGIN      
        1 mpcfqsvace tsesmenfvl yeeigrgnat vvykgrrkgt infvaivcsd kckragvsnw
       61 vrltqglthk nimtfyewye tsnhlwlvve lctggslecl iaqdeclped vvrefgidlv
      121 tglyhihkhg iiycelkpgk illegsgtlk fssfcrarad gedlekvfal agaeegedin
      181 entlqryfkn ivqdfpfyta peaikgdnfc kasdlwslgc llyemfsgkp pflsesrsel
      241 iekilsedpl rpgpessafh rpsaefisll dgllqkdpqk rlnwtdllqh pfwkgslshc
      301 gvgsadrqst slsredtess vfcsakesvd dhentdnpss sraglkppcn sfkietqtel
      361 rpksvvdges nesifllssr ptprtnsave vcdaatvpik nssqgdswlk kaenvcssqq
      421 dmesklkeli ytesdlvvtp iidnakimkq vpvrfdpktl hipahsvekl ssmkdvdwnn
      481 fvkrvcslle ssekntgaar sklnllyylc tlvvhkeian rlissqlfpi liqqlrtaan
      541 wdiraniarv igllashtse leenvpvsea itlltelire nfrnsklkqc flpalgelly
      601 liaskeekge hprecwavps aaytvlmrcl regeervvnh iaakiienvc ttrschaqgf
      661 itgeigpvlw ylfthstgds lkitpisalc ritrsspnaf qsviekvglt ailnslangi
      721 ckiqqymltm fsamlscgih lqrliqekdf vttitrlles pstfirakaf lvllqvlinn
      781 remlllscqt rlmmyierds rktmpgkeqq ggseylskcl dlliyhivqe lpgilgdils
      841 alanvsgrkh pstvqakqlk mclpmmpvvl hlvtsqvfrp qivtkeflfn ygilvefirs
      901 idsgetildr aigqaaseel ikttlltfea vtehpsllmt hrvtvedsiv pplislvhsh
      961 nvewrlfslr llsettsvll shevvgeekg eslnsnnkll slirdlllpq yehillapdp
     1021 vpmyalkllv alterspasv slleeihlfp vlfqvilryq dsilgntmqt vvallnniva
     1081 nksmnmmilf qeglthhvcn llteavalyl eaddkrstkt anvlllslld ilqymltyta
     1141 nivrqtlqaq ksgaggdtqa aedlllinkp ltdltsqliq llpsddteif lsasqsllll
     1201 vqlyggsnqe smspenmdsf aevlkskedp relklllkiv krlitsnkkh leslkndgda
     1261 liqaleslvq tasshvdtav aslafeilra vgheniktpk
//
LOCUS       XP_041322394             245 aa            linear   VRT 06-MAY-2021
DEFINITION  claudin-12 [Pyrgilauda ruficollis].
ACCESSION   XP_041322394
VERSION     XP_041322394.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466460.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="claudin-12"
                     /calculated_mol_wt=27074
     CDS             1..245
                     /gene="CLDN12"
                     /coded_by="XM_041466460.1:163..900"
                     /db_xref="GeneID:121352980"
ORIGIN      
        1 mgcrdvhaat vlaflsgtas vagllaavll pnwrqmrlyt ynknernvtv ytglwikcar
       61 fdgsrdcviy dpqwytavdq ldlrvlqfal plsmftavsa lflcmigmcn tafvssvpnv
      121 klakclvnsa gchlvagllf llacaicltp siwvifynny lnrkyepifs fdisvfiaia
      181 sagglfftsi llflwycack slpspfwqpl yshapsmhsy asqpysarsr lsaveidipv
      241 vthss
//
LOCUS       XP_041322395             245 aa            linear   VRT 06-MAY-2021
DEFINITION  claudin-12 [Pyrgilauda ruficollis].
ACCESSION   XP_041322395
VERSION     XP_041322395.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466461.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="claudin-12"
                     /calculated_mol_wt=27074
     CDS             1..245
                     /gene="CLDN12"
                     /coded_by="XM_041466461.1:214..951"
                     /db_xref="GeneID:121352980"
ORIGIN      
        1 mgcrdvhaat vlaflsgtas vagllaavll pnwrqmrlyt ynknernvtv ytglwikcar
       61 fdgsrdcviy dpqwytavdq ldlrvlqfal plsmftavsa lflcmigmcn tafvssvpnv
      121 klakclvnsa gchlvagllf llacaicltp siwvifynny lnrkyepifs fdisvfiaia
      181 sagglfftsi llflwycack slpspfwqpl yshapsmhsy asqpysarsr lsaveidipv
      241 vthss
//
LOCUS       XP_041322396             234 aa            linear   VRT 06-MAY-2021
DEFINITION  proteasome subunit alpha type-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322396
VERSION     XP_041322396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466462.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="proteasome subunit alpha type-2"
                     /calculated_mol_wt=25805
     Region          6..231
                     /region_name="proteasome_alpha_type_2"
                     /note="The 20S proteasome, multisubunit proteolytic
                     complex, is the central enzyme of nonlysosomal protein
                     degradation in both the cytosol and nucleus. It is
                     composed of 28 subunits arranged as four homoheptameric
                     rings that stack on top of one another forming...;
                     cd03750"
                     /db_xref="CDD:239719"
     Site            order(8..11,13..14,16..17,21,24,27..28,31,39,54,56..57,
                     80..82,84..85,116,119,122..123,126..130,147,152..153,155,
                     157..158,160)
                     /site_type="other"
                     /note="alpha subunit interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239719"
     Site            order(33,49,51,64,165)
                     /site_type="active"
                     /db_xref="CDD:239719"
     CDS             1..234
                     /gene="PSMA2"
                     /coded_by="XM_041466462.1:83..787"
                     /db_xref="GeneID:121352981"
ORIGIN      
        1 maergysfsl ttfspsgklv qieyalaava agapsvgika angvvlatek kqksilyder
       61 svhkvepitk higlvysgmg pdyrvlvhra rklaqqyylv yhepiptaql vqriasvmqe
      121 ytqsggvrpf gvsllicgwn egrpylfqsd psgayfawka tamgknyvng ktflekryne
      181 dleledaiht ailtlkesfe gqmtedniev gicneagfrr ltptevkdyl aaia
//
LOCUS       XP_041322397             448 aa            linear   VRT 06-MAY-2021
DEFINITION  alkylglycerol monooxygenase [Pyrgilauda ruficollis].
ACCESSION   XP_041322397
VERSION     XP_041322397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466463.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="alkylglycerol monooxygenase"
                     /calculated_mol_wt=51323
     Region          117..270
                     /region_name="ERG3"
                     /note="Sterol desaturase/sphingolipid hydroxylase, fatty
                     acid hydroxylase superfamily [Lipid transport and
                     metabolism]; COG3000"
                     /db_xref="CDD:442238"
     CDS             1..448
                     /gene="AGMO"
                     /coded_by="XM_041466463.1:51..1397"
                     /db_xref="GeneID:121352982"
ORIGIN      
        1 mgaeaggprd tapgqqlral fyalapgess frtveevpdy veksipffit figlefavsw
       61 iqkrklpgri ndgisslslg ilsrlpdvlf rsielisyiy vwnnyrlfel pwdspwtwyl
      121 tllgvdfayy cfhrmshevn ilwaahqvhh ssedynlfta lrqsvlqkyt swmfnlpmal
      181 fippsvfavh lqfnllyqfw ihtevitklg plewilntps hhrvhhgrnp ycidknyggt
      241 liiwdrifgt feaedakvvy glthpinsfd pimvqlrpla hiwntfwatp gfcnklsvif
      301 kgpgwgpgkp rlglpeeipv itgkevpfnp rvpaylncya lvhfavivdl yiellasmtm
      361 lsqgtvlmri gfiilslasf gllmenkska gileiirclv figvyklgyf rshfsfldya
      421 yevlfslcaa fwgiqimkri tslkdkqq
//
LOCUS       XP_041322398             813 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322398
VERSION     XP_041322398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="calpain-7 isoform X1"
                     /calculated_mol_wt=92525
     Region          6..76
                     /region_name="MIT_calpain7_1"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in the nuclear thiol protease PalBH.
                     The molecular function of the MIT domain is unclear;
                     cd02681"
                     /db_xref="CDD:239144"
     Region          85..159
                     /region_name="MIT_calpain7_2"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in the nuclear thiol protease PalBH.
                     The molecular function of the MIT domain is unclear;
                     cd02680"
                     /db_xref="CDD:239143"
     Region          214..538
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(290,458,478)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     Region          687..810
                     /region_name="calpain_III"
                     /note="calpain_III domain; smart00720"
                     /db_xref="CDD:214786"
     CDS             1..813
                     /gene="CAPN7"
                     /coded_by="XM_041466464.1:111..2552"
                     /db_xref="GeneID:121352983"
ORIGIN      
        1 mdattlelda vkfaklavqr dqsgryqeav fyykeaaqal iyagmagsnl eniqekiney
       61 lervqalhsa vqsqktdplk skqqldlera hflvtqafde ddkgnaeeai elyteavelc
      121 lktatetsea glqsklkqla rqaldraeal kesmskssqk ekstaakpnq pvrtffplgp
      181 dfslndkpqt iravqasesq gqrytaeeie vlrktsking ieyvpfmsvd lrerfafpmp
      241 fsdkcgklpl spkqkamfak wvrpdditnn ptmiytvssf sikqtivsdc sfvaslaisa
      301 ayerrynkkl itsiiypqnk kgepeynpcg kymvklhing vprkviiddq lpvdhsgell
      361 csysnnknel wvsliekaym kvmggydfpg snsnidlhal tgwiperiam hsdnqafnkd
      421 stfrmlyqrf hkgdvlitta tgvmseeege kwglvpthay avldireykg lrflqlknpw
      481 shlrwkgrys endtrnwtpd lqkylnfdpr taqkidngif wiswedlcqy ydviylswnp
      541 slfkestcih stwdakqgpv kdayslannp qyklevqcpq ggaavwvlls rhitdkddfa
      601 hnrefitmvv yktdgkkvyy padpppyidg irinsphylt kikltspgsh tftlvvsqye
      661 kqntihytir vyslckftfs kiptpytisk rvngqwkghs aggcgnfrdt yknnpiyqfq
      721 ldkngpllie lrgprqysvg felvtvstvg dpgsygfqkk ssgdyrcgfc yleventfag
      781 vyniipttfl pqqegpffld fnsttplkvs qlq
//
LOCUS       XP_041322399             703 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322399
VERSION     XP_041322399.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466465.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..703
                     /product="calpain-7 isoform X2"
                     /calculated_mol_wt=80384
     Region          <14..49
                     /region_name="MIT"
                     /note="domain contained within Microtubule Interacting and
                     Trafficking molecules. The MIT domain is found in sorting
                     nexins, the nuclear thiol protease PalBH, the AAA protein
                     spastin and archaebacterial proteins with similar domain
                     architecture, vacuolar...; cl00299"
                     /db_xref="CDD:469712"
     Region          104..428
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(180,348,368)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     Region          577..700
                     /region_name="calpain_III"
                     /note="calpain_III domain; smart00720"
                     /db_xref="CDD:214786"
     CDS             1..703
                     /gene="CAPN7"
                     /coded_by="XM_041466465.1:140..2251"
                     /db_xref="GeneID:121352983"
ORIGIN      
        1 mlsyrltwwn yvmatetsea glqsklkqla rqaldraeal kesmskssqk ekstaakpnq
       61 pvrtffplgp dfslndkpqt iravqasesq gqrytaeeie vlrktsking ieyvpfmsvd
      121 lrerfafpmp fsdkcgklpl spkqkamfak wvrpdditnn ptmiytvssf sikqtivsdc
      181 sfvaslaisa ayerrynkkl itsiiypqnk kgepeynpcg kymvklhing vprkviiddq
      241 lpvdhsgell csysnnknel wvsliekaym kvmggydfpg snsnidlhal tgwiperiam
      301 hsdnqafnkd stfrmlyqrf hkgdvlitta tgvmseeege kwglvpthay avldireykg
      361 lrflqlknpw shlrwkgrys endtrnwtpd lqkylnfdpr taqkidngif wiswedlcqy
      421 ydviylswnp slfkestcih stwdakqgpv kdayslannp qyklevqcpq ggaavwvlls
      481 rhitdkddfa hnrefitmvv yktdgkkvyy padpppyidg irinsphylt kikltspgsh
      541 tftlvvsqye kqntihytir vyslckftfs kiptpytisk rvngqwkghs aggcgnfrdt
      601 yknnpiyqfq ldkngpllie lrgprqysvg felvtvstvg dpgsygfqkk ssgdyrcgfc
      661 yleventfag vyniipttfl pqqegpffld fnsttplkvs qlq
//
LOCUS       XP_041322400             719 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-7 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322400
VERSION     XP_041322400.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466466.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..719
                     /product="calpain-7 isoform X3"
                     /calculated_mol_wt=82007
     Region          6..76
                     /region_name="MIT_calpain7_1"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in the nuclear thiol protease PalBH.
                     The molecular function of the MIT domain is unclear;
                     cd02681"
                     /db_xref="CDD:239144"
     Region          85..159
                     /region_name="MIT_calpain7_2"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in the nuclear thiol protease PalBH.
                     The molecular function of the MIT domain is unclear;
                     cd02680"
                     /db_xref="CDD:239143"
     Region          214..538
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(290,458,478)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     Region          593..716
                     /region_name="calpain_III"
                     /note="calpain_III domain; smart00720"
                     /db_xref="CDD:214786"
     CDS             1..719
                     /gene="CAPN7"
                     /coded_by="XM_041466466.1:111..2270"
                     /db_xref="GeneID:121352983"
ORIGIN      
        1 mdattlelda vkfaklavqr dqsgryqeav fyykeaaqal iyagmagsnl eniqekiney
       61 lervqalhsa vqsqktdplk skqqldlera hflvtqafde ddkgnaeeai elyteavelc
      121 lktatetsea glqsklkqla rqaldraeal kesmskssqk ekstaakpnq pvrtffplgp
      181 dfslndkpqt iravqasesq gqrytaeeie vlrktsking ieyvpfmsvd lrerfafpmp
      241 fsdkcgklpl spkqkamfak wvrpdditnn ptmiytvssf sikqtivsdc sfvaslaisa
      301 ayerrynkkl itsiiypqnk kgepeynpcg kymvklhing vprkviiddq lpvdhsgell
      361 csysnnknel wvsliekaym kvmggydfpg snsnidlhal tgwiperiam hsdnqafnkd
      421 stfrmlyqrf hkgdvlitta tgvmseeege kwglvpthay avldireykg lrflqlknpw
      481 shlrwkgrys endtrnwtpd lqkylnfdpr taqkidngif wiswedlcqy ydviylswnp
      541 slfkestcih rmtlhtigns lqwlytrlma krftiqvysl ckftfskipt pytiskrvng
      601 qwkghsaggc gnfrdtyknn piyqfqldkn gpllielrgp rqysvgfelv tvstvgdpgs
      661 ygfqkkssgd yrcgfcylev entfagvyni ipttflpqqe gpffldfnst tplkvsqlq
//
LOCUS       XP_041322401             424 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 domain-binding protein 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322401
VERSION     XP_041322401.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466467.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="SH3 domain-binding protein 5 isoform X1"
                     /calculated_mol_wt=47089
     Region          22..250
                     /region_name="SH3BP5"
                     /note="SH3 domain-binding protein 5 (SH3BP5); pfam05276"
                     /db_xref="CDD:461608"
     CDS             1..424
                     /gene="SH3BP5"
                     /coded_by="XM_041466467.1:74..1348"
                     /db_xref="GeneID:121352985"
ORIGIN      
        1 mepggrrgrp aeepprpede evdpriqgel eklnqstddi nrreteleda rqkfrsvlve
       61 atvkldelvk kigkavedsk pywearrvar qaqleaqrat qdfqratevl raaketisla
      121 eqrlleddkr qfdsawqeml nhatqrvmea eqtktrselv hketaakyna amgrmkqlek
      181 klkrainksk pyfelkakyy vqleqlkktv ddlqaklala kgeyktalkn lemisdeihe
      241 rrrstamgpr gcgvgaegsn tsvedlsatk pepdtvsmas evfeddngss fvseedsetq
      301 svssfssgpt spcevptqfp pvtrpgsldl pspvslsefg mifpvlgprs ecsgasspec
      361 eaergdraeg aenktsdrvn knrsstrsss teglaldnrm kqlslqcmki kegicagrka
      421 aqig
//
LOCUS       XP_041322402             401 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 domain-binding protein 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322402
VERSION     XP_041322402.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466468.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="SH3 domain-binding protein 5 isoform X2"
                     /calculated_mol_wt=44537
     Region          1..227
                     /region_name="SH3BP5"
                     /note="SH3 domain-binding protein 5 (SH3BP5); pfam05276"
                     /db_xref="CDD:461608"
     CDS             1..401
                     /gene="SH3BP5"
                     /coded_by="XM_041466468.1:167..1372"
                     /db_xref="GeneID:121352985"
ORIGIN      
        1 mrengelekl nqstddinrr eteledarqk frsvlveatv kldelvkkig kavedskpyw
       61 earrvarqaq leaqratqdf qratevlraa ketislaeqr lleddkrqfd sawqemlnha
      121 tqrvmeaeqt ktrselvhke taakynaamg rmkqlekklk rainkskpyf elkakyyvql
      181 eqlkktvddl qaklalakge yktalknlem isdeiherrr stamgprgcg vgaegsntsv
      241 edlsatkpep dtvsmasevf eddngssfvs eedsetqsvs sfssgptspc evptqfppvt
      301 rpgsldlpsp vslsefgmif pvlgprsecs gasspeceae rgdraegaen ktsdrvnknr
      361 sstrsssteg laldnrmkql slqcmkikeg icagrkaaqi g
//
LOCUS       XP_041322403             197 aa            linear   VRT 06-MAY-2021
DEFINITION  sorcin [Pyrgilauda ruficollis].
ACCESSION   XP_041322403
VERSION     XP_041322403.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466469.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..197
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..197
                     /product="sorcin"
                     /calculated_mol_wt=21568
     Region          33..197
                     /region_name="EFh_PEF_sorcin"
                     /note="Penta-EF hand, calcium binding motifs, found in
                     sorcin; cd16187"
                     /db_xref="CDD:320062"
     Region          33..61
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320062"
     Site            order(45,52,82,84,86,93,112,114,116,123)
                     /site_type="other"
                     /note="putative Ca binding site [ion binding]"
                     /db_xref="CDD:320062"
     Region          73..102
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320062"
     Site            order(75..76,85,133,139,142..143,145..147,161,164..165,
                     168..169,172,181..188,190..192,194..197)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:320062"
     Region          103..133
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320062"
     Region          139..166
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320062"
     Site            order(146..148,174..177)
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:320062"
     Region          167..197
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320062"
     CDS             1..197
                     /gene="SRI"
                     /coded_by="XM_041466469.1:137..730"
                     /db_xref="GeneID:121352986"
ORIGIN      
        1 maypgqpapg gfyqggygga pggpafpgqa qdplygyfaa vggqdgqida delqrcltqs
       61 giagaykpfn letcrlmism ldrdmsgtlg fnefkelwav vngwkqhfvs fdsdgsgtvd
      121 rqelekalmt mgfrlspqav taitkrystq gkiafddyia ccvklralte cfrrrdttqq
      181 gfvnfhyddf iqcvmsi
//
LOCUS       XP_041322405             559 aa            linear   VRT 06-MAY-2021
DEFINITION  endonuclease/exonuclease/phosphatase family domain-containing
            protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322405
VERSION     XP_041322405.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466471.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="endonuclease/exonuclease/phosphatase family
                     domain-containing protein 1"
                     /calculated_mol_wt=61716
     Region          38..95
                     /region_name="ComEA"
                     /note="DNA uptake protein ComE or related DNA-binding
                     protein [Replication, recombination and repair]; COG1555"
                     /db_xref="CDD:441164"
     Region          118..187
                     /region_name="ComEA"
                     /note="DNA uptake protein ComE or related DNA-binding
                     protein [Replication, recombination and repair]; COG1555"
                     /db_xref="CDD:441164"
     Region          253..528
                     /region_name="MnuA_DNase1-like"
                     /note="Mycoplasma pulmonis MnuA nuclease-like; cd10283"
                     /db_xref="CDD:197338"
     Site            order(259..260,262,293,295..296,342,376,396,438,440,
                     479..480,520..521)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197338"
     Site            order(259,293,342,396,438,440,480,520..521)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197338"
     Site            order(259,293,520)
                     /site_type="other"
                     /note="putative Mg binding site IVb [ion binding]"
                     /db_xref="CDD:197338"
     Site            order(261,396,438,440,521)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197338"
     Site            order(262,295..296,342,376,396,438,440,479,521)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:197338"
     Site            order(438,480,521)
                     /site_type="other"
                     /note="putative Mg binding site IVa [ion binding]"
                     /db_xref="CDD:197338"
     CDS             1..559
                     /gene="EEPD1"
                     /coded_by="XM_041466471.1:138..1817"
                     /db_xref="GeneID:121352987"
ORIGIN      
        1 mggslgchrs iprdpadlch srkfsaacnf snilvnqerl nintateeel mtlpgvtrvv
       61 aqniveyrey iggfkkvedl alvsgvgaak leqvkfeicv sskgssaqhs pssvrkdpas
      121 ehhlsatkin intatpaqlm sirgitekia nsivdyrkeh gpfksiedlv rmdcinssfl
      181 dkirhqifae rsrppstntn gglnftakph psptslslqs edldfppggp tqiistrpsv
      241 emfggvrdgr pvfrvatwnl qscstekann pgvrevvcmt llensiklla vqeladreal
      301 ekfcmelnqp mlpnirkwkg prgcwkgvvs ekpsgqlhkg veysgflwdt tagielkdas
      361 sqetaqtngn grhsyphpyl ahfkvgmndl tvvnlhlalp psagentgkn hdshklaaca
      421 qslqetlkge kdviilgdfn qapdssdhdi lrkekfhhlv psstftnist knpqgsksld
      481 niwisrslkk vftghwavvr egltnpwipd nwswggvase hcpvlaefyl ekdwnrkevt
      541 rngngvtver ndshakher
//
LOCUS       XP_041322406              55 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import receptor subunit TOM7 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322406
VERSION     XP_041322406.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466472.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..55
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..55
                     /product="mitochondrial import receptor subunit TOM7
                     homolog"
                     /calculated_mol_wt=6158
     Region          9..53
                     /region_name="Tom7"
                     /note="TOM7 family; pfam08038"
                     /db_xref="CDD:462344"
     CDS             1..55
                     /gene="TOMM7"
                     /coded_by="XM_041466472.1:72..239"
                     /db_xref="GeneID:121352988"
ORIGIN      
        1 mpklskeakq rlqqlfkggq fairwgfipv vlylgfkrga dpgmpeptiw sllwg
//
LOCUS       XP_041322407             210 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121352989 [Pyrgilauda ruficollis].
ACCESSION   XP_041322407
VERSION     XP_041322407.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466473.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="uncharacterized protein LOC121352989"
                     /calculated_mol_wt=23265
     CDS             1..210
                     /gene="LOC121352989"
                     /coded_by="XM_041466473.1:1..633"
                     /db_xref="GeneID:121352989"
ORIGIN      
        1 meeersrarn savrwagpia glrggdrrwp cpraaeemaa agfpssagcs lpcrvfsarh
       61 dpsalvppaf qrrrlrdrqr drdrpsgagg cegarglqal wvslpalapa aflclffpga
      121 levlltrrlc rvgsafgnll pfavmpdpsq mqlrrpgkek qqseqgltmp skvrssship
      181 wqslvlpelp eqelpftnwk fnqykgkyqr
//
LOCUS       XP_041322408             489 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell activation inhibitor, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041322408
VERSION     XP_041322408.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466474.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="T-cell activation inhibitor, mitochondrial"
                     /calculated_mol_wt=57031
     Region          23..133
                     /region_name="DUF4460"
                     /note="Domain of unknown function (DUF4460); pfam14687"
                     /db_xref="CDD:464262"
     Region          187..487
                     /region_name="DUF4461"
                     /note="Domain of unknown function (DUF4461); pfam14688"
                     /db_xref="CDD:464263"
     CDS             1..489
                     /gene="TCAIM"
                     /coded_by="XM_041466474.1:127..1596"
                     /db_xref="GeneID:121352990"
ORIGIN      
        1 mfcclrtvrr lyldkillqc ilqsrtlsga dainalrpfy favhpdffgq hpkerevnen
       61 slkrlngyle nlqkpgfrsf kptqltfyvr erepnssnvq esfsasgfra vsftlhtrdl
      121 lstvldilns cslstehvqs lnvnsqphke akstvnrpik wdktyysftg fkdpeeeleq
      181 aqrvettlls wlddneasav kklkkslplr kelerlkfel shelqlsdir wqrswgiahr
      241 csqlhslgrl vqqrpevlen vkgrtvvftd rsgmsaaghi mlgtmdvhhh wtkiferlpn
      301 yyklqkrlll ledrisqllg giqviyieel qplltleeyf etlnsfynkl rdsrlpfhpr
      361 slrglqmile sdryapslhe lghfmiptvc dpaalqwfif akaqearenl krkeemmite
      421 kelintster fsldrlykep svssaqmidc ckrlleeslp ylqgmhlcis hfysvlqdgd
      481 lcipwnwkn
//
LOCUS       XP_041322409             489 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell activation inhibitor, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041322409
VERSION     XP_041322409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="T-cell activation inhibitor, mitochondrial"
                     /calculated_mol_wt=57031
     Region          23..133
                     /region_name="DUF4460"
                     /note="Domain of unknown function (DUF4460); pfam14687"
                     /db_xref="CDD:464262"
     Region          187..487
                     /region_name="DUF4461"
                     /note="Domain of unknown function (DUF4461); pfam14688"
                     /db_xref="CDD:464263"
     CDS             1..489
                     /gene="TCAIM"
                     /coded_by="XM_041466475.1:163..1632"
                     /db_xref="GeneID:121352990"
ORIGIN      
        1 mfcclrtvrr lyldkillqc ilqsrtlsga dainalrpfy favhpdffgq hpkerevnen
       61 slkrlngyle nlqkpgfrsf kptqltfyvr erepnssnvq esfsasgfra vsftlhtrdl
      121 lstvldilns cslstehvqs lnvnsqphke akstvnrpik wdktyysftg fkdpeeeleq
      181 aqrvettlls wlddneasav kklkkslplr kelerlkfel shelqlsdir wqrswgiahr
      241 csqlhslgrl vqqrpevlen vkgrtvvftd rsgmsaaghi mlgtmdvhhh wtkiferlpn
      301 yyklqkrlll ledrisqllg giqviyieel qplltleeyf etlnsfynkl rdsrlpfhpr
      361 slrglqmile sdryapslhe lghfmiptvc dpaalqwfif akaqearenl krkeemmite
      421 kelintster fsldrlykep svssaqmidc ckrlleeslp ylqgmhlcis hfysvlqdgd
      481 lcipwnwkn
//
LOCUS       XP_041322410             511 aa            linear   VRT 06-MAY-2021
DEFINITION  ectonucleoside triphosphate diphosphohydrolase 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322410
VERSION     XP_041322410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="ectonucleoside triphosphate diphosphohydrolase
                     3"
                     /calculated_mol_wt=57466
     Region          41..451
                     /region_name="ASKHA_NBD_NTPDase3"
                     /note="nucleotide-binding domain (NBD) of ectonucleoside
                     triphosphate diphosphohydrolase 3 (NTPDase3) and similar
                     proteins; cd24112"
                     /db_xref="CDD:466962"
     CDS             1..511
                     /gene="ENTPD3"
                     /coded_by="XM_041466476.1:5..1540"
                     /db_xref="GeneID:121352991"
ORIGIN      
        1 mltrtpsvva qvflllsivl viaiaviqin qqqilspglk ygivldagss rttvyvyewp
       61 aekenntgvv sqtfkcnvkg pgissyessp galakplddc lnkvkeripv hlhkntsvyl
      121 gatagmrllr lqnesaanev lasiqsyfra qpfefrgaqi itgpeegvyg witanylmgn
      181 flernlwrtw vhpygketvg aldlggastq isfipedpee hlnstlqvkl ygynynvyth
      241 syqcygrdea ekrllalllq ksntsanvdn pcypqnynta ltmkdffgsl ctqslrpany
      301 ypnqlvnfhg tgdpglcqkm vsllfnftac rdredcpfng ihqpkpkgnf vafsgfyyti
      361 nalnlsgqfs lddfnssmwf fcsqswaqlh fmlpkfeeiy arsycfsanf iyyllvhgyn
      421 fnaetwpqih fqkevgnssi awslgymlsl tnmipaegkl iqlplkpslf agllvfltat
      481 allcllfliy lcvvshhrkd vprvehvfip e
//
LOCUS       XP_041322412             582 aa            linear   VRT 06-MAY-2021
DEFINITION  acyloxyacyl hydrolase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322412
VERSION     XP_041322412.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466478.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="acyloxyacyl hydrolase isoform X1"
                     /calculated_mol_wt=65553
     Region          49..121
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     Region          251..553
                     /region_name="acyloxyacyl_hydrolase_like"
                     /note="Acyloxyacyl-hydrolase like subfamily of the
                     SGNH-hydrolase family. Acyloxyacyl-hydrolase is a
                     leukocyte-secreted enzyme that deacetylates bacterial
                     lipopolysaccharides; cd01826"
                     /db_xref="CDD:238864"
     Site            order(270,348,380,534,537)
                     /site_type="active"
                     /db_xref="CDD:238864"
     Site            order(270,534,537)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238864"
     Site            order(270,348,380)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238864"
     CDS             1..582
                     /gene="AOAH"
                     /coded_by="XM_041466478.1:68..1816"
                     /db_xref="GeneID:121352993"
ORIGIN      
        1 mkesrqtfln lfcilwllll lktasssplp rgkdprapsl pfglykghtc vgcvlvvsvi
       61 eqlaqwhnst vkaaverlcd yipeklqgfc yvlaelygph iaelidremn advvchslrl
      121 ckqdpgqplc hlysppkvgl svairkakri mktskdlknf mgfssvcafp llanlcekik
      181 yvlrnklpfe dfdgdkfstf ptlrgyhwrg rdcndknttv ypgrrpdnwd aksdsncngi
      241 wgvdpkdgip yeekfckgad srgvvllgds agahfhippe wmtvtqmsak sfanlpmafs
      301 defdwpqfse itgflnstig gwtdslylrl rkrnrcnhrd lqnisqnggs sgnllsliks
      361 larnqlldnp aiviyatign dvcngerdtl ahmttpkeml snvvqalryl dshlpngshv
      421 iltglvdgrf lwdnlhdryh plgqlnkdvt ysqlysfldc lqvspcsgwl tpnetlrnlt
      481 seralqlsnv lkeiarsekf anfdifymdf plrqtaeewh kmggepwqli epvdgfhpsq
      541 iaaalgtgit wqkalhewpq vlgkenpfnd qieaifkdqg gh
//
LOCUS       XP_041322413             624 aa            linear   VRT 06-MAY-2021
DEFINITION  acyloxyacyl hydrolase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322413
VERSION     XP_041322413.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466479.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="acyloxyacyl hydrolase isoform X2"
                     /calculated_mol_wt=70155
     Region          91..163
                     /region_name="SapB"
                     /note="Saposin (B) Domains; smart00741"
                     /db_xref="CDD:214797"
     Region          293..595
                     /region_name="acyloxyacyl_hydrolase_like"
                     /note="Acyloxyacyl-hydrolase like subfamily of the
                     SGNH-hydrolase family. Acyloxyacyl-hydrolase is a
                     leukocyte-secreted enzyme that deacetylates bacterial
                     lipopolysaccharides; cd01826"
                     /db_xref="CDD:238864"
     Site            order(312,390,422,576,579)
                     /site_type="active"
                     /db_xref="CDD:238864"
     Site            order(312,576,579)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238864"
     Site            order(312,390,422)
                     /site_type="active"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238864"
     CDS             1..624
                     /gene="AOAH"
                     /coded_by="XM_041466479.1:1..1875"
                     /db_xref="GeneID:121352993"
ORIGIN      
        1 mlsgsgnscg srslvirccc rrhrsaepel ciqpswsarp armkesrqtf lnlfcilwll
       61 lllktasssp lprgkdprap slpfglykgh tcvgcvlvvs vieqlaqwhn stvkaaverl
      121 cdyipeklqg fcyvlaelyg phiaelidre mnadvvchsl rlckqdpgqp lchlysppkv
      181 glsvairkak rimktskdlk nfmgfssvca fpllanlcek ikyvlrnklp fedfdgdkfs
      241 tfptlrgyhw rgrdcndknt tvypgrrpdn wdaksdsncn giwgvdpkdg ipyeekfckg
      301 adsrgvvllg dsagahfhip pewmtvtqms aksfanlpma fsdefdwpqf seitgflnst
      361 iggwtdslyl rlrkrnrcnh rdlqnisqng gssgnllsli kslarnqlld npaiviyati
      421 gndvcngerd tlahmttpke mlsnvvqalr yldshlpngs hviltglvdg rflwdnlhdr
      481 yhplgqlnkd vtysqlysfl dclqvspcsg wltpnetlrn ltseralqls nvlkeiarse
      541 kfanfdifym dfplrqtaee whkmggepwq liepvdgfhp sqiaaalgtg itwqkalhew
      601 pqvlgkenpf ndqieaifkd qggh
//
LOCUS       XP_041322414             652 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-galactosidase [Pyrgilauda ruficollis].
ACCESSION   XP_041322414
VERSION     XP_041322414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466480.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..652
                     /product="beta-galactosidase"
                     /calculated_mol_wt=73118
     Region          34..348
                     /region_name="Glyco_hydro_35"
                     /note="Glycosyl hydrolases family 35; pfam01301"
                     /db_xref="CDD:396048"
     Region          <539..607
                     /region_name="BetaGal_dom4_5"
                     /note="Beta-galactosidase jelly roll domain; pfam13364"
                     /db_xref="CDD:463857"
     CDS             1..652
                     /gene="GLB1"
                     /coded_by="XM_041466480.1:71..2029"
                     /db_xref="GeneID:121352994"
ORIGIN      
        1 mlrlllplaa laallraani persfgidyd sncfvkdgka fryisgsihy srvpsyywkd
       61 rllkmkmagl daiqtyvpwn yhepqmgtyd ffggkdleyf lqlandtgll vilragpyic
      121 aewdmgglpa wllekksivl rssdsdylea verwmgvllp kmrpylyqng gpiimvqven
      181 eygsyfacdy dylrfllklf rlhlgdevvl fttdgasqfh lkcgalqgly atvdfapggn
      241 vtaaflaqrn sepkgplvns efytgwldhw ghrhsvvpae tiaktlneil arganvnlym
      301 figgtnfayw nganmpympq ptsydydapl seagdlteky ftlrkvigmy kqlpeglipp
      361 ttpkfaygkv rlqkagsvle ildglspsgp vrstypltfv elkqyfgyvl yrttlpkncv
      421 eptplsspln gvhdrayvsv dgvpqgvler dkslkinitg qaganldilv enmgrvnfgr
      481 ynndfkglvs nltlaqdilv gweiypldid gavnygiiyl lhhqntsavk alnyevptfy
      541 tgtlsipggi pdlpqdtyvn fpgwtkgqiw ingfnlgryw pargpqltly vprnvlvasv
      601 pnnitvlele rspcsaqace iefvdepnin atlqhetekp plfvrelwmk hp
//
LOCUS       XP_041322415             438 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein with metallophosphoesterase domain
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322415
VERSION     XP_041322415.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466481.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..438
                     /product="transmembrane protein with
                     metallophosphoesterase domain"
                     /calculated_mol_wt=48202
     Region          204..435
                     /region_name="MPP_YkuE_C"
                     /note="Bacillus subtilis YkuE and related proteins,
                     C-terminal metallophosphatase domain; cd07385"
                     /db_xref="CDD:277331"
     Site            order(212,214,244,275..276,355,377,379)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277331"
     Site            order(212,214,244,275,355,377,379)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277331"
     CDS             1..438
                     /gene="TMPPE"
                     /coded_by="XM_041466481.1:219..1535"
                     /db_xref="GeneID:121352995"
ORIGIN      
        1 misfkqlpie akaavaagvv ffsmmlsrsy laekldfrtr rwllrlqmal fantlmlmgs
       61 lhvwrstvtt ftrssaassf cfmlwklavf mflalahssf ftllflvaee pyffslaayt
      121 clgayiilif flftlgtveq aykllagrga kagtgnknrt alkpvlavll tvvltvvgll
      181 nasqpptvns veipvhklps tmnnlkvvll sdihlgptvg ktklamivrm vkalkpditv
      241 ivgdlsdaea kiirpavepl geldsplgty fvtgnheyyt sdvsnwfell ksfniqplhn
      301 envkivspks tsdwfclagv ddieadvlry sghgmdlkka lrgcssehai vllahqpiaa
      361 kwalqerpdi nlilsghthg gqifplnaga yllnpffvgl yqvgqntfvy vspgtmyygi
      421 pmrlgsraei teiilrsp
//
LOCUS       XP_041322416             438 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein with metallophosphoesterase domain
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322416
VERSION     XP_041322416.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466482.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..438
                     /product="transmembrane protein with
                     metallophosphoesterase domain"
                     /calculated_mol_wt=48202
     Region          204..435
                     /region_name="MPP_YkuE_C"
                     /note="Bacillus subtilis YkuE and related proteins,
                     C-terminal metallophosphatase domain; cd07385"
                     /db_xref="CDD:277331"
     Site            order(212,214,244,275..276,355,377,379)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277331"
     Site            order(212,214,244,275,355,377,379)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277331"
     CDS             1..438
                     /gene="TMPPE"
                     /coded_by="XM_041466482.1:457..1773"
                     /db_xref="GeneID:121352995"
ORIGIN      
        1 misfkqlpie akaavaagvv ffsmmlsrsy laekldfrtr rwllrlqmal fantlmlmgs
       61 lhvwrstvtt ftrssaassf cfmlwklavf mflalahssf ftllflvaee pyffslaayt
      121 clgayiilif flftlgtveq aykllagrga kagtgnknrt alkpvlavll tvvltvvgll
      181 nasqpptvns veipvhklps tmnnlkvvll sdihlgptvg ktklamivrm vkalkpditv
      241 ivgdlsdaea kiirpavepl geldsplgty fvtgnheyyt sdvsnwfell ksfniqplhn
      301 envkivspks tsdwfclagv ddieadvlry sghgmdlkka lrgcssehai vllahqpiaa
      361 kwalqerpdi nlilsghthg gqifplnaga yllnpffvgl yqvgqntfvy vspgtmyygi
      421 pmrlgsraei teiilrsp
//
LOCUS       XP_041322417             206 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Ral-A [Pyrgilauda ruficollis].
ACCESSION   XP_041322417
VERSION     XP_041322417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="ras-related protein Ral-A"
                     /calculated_mol_wt=23404
     Region          15..177
                     /region_name="RalA_RalB"
                     /note="Ral (Ras-like) family containing highly homologous
                     RalA and RalB; cd04139"
                     /db_xref="CDD:206710"
     Site            21..28
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206710"
     Site            order(22..23,70..72,74..75,79,82,97,99,102..103,106..107,
                     110)
                     /site_type="active"
                     /note="GDI interaction site [active]"
                     /db_xref="CDD:206710"
     Site            order(23..29,39..40,46,71,127..128,130,157..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206710"
     Site            order(28..29,43,45,51..52,65..66,68,70..71,159)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206710"
     Site            order(36,38,47..52,56,60..61,160..163,165)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206710"
     Site            44..51
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206710"
     Site            46
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206710"
     Site            68..71
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206710"
     Site            70..88
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206710"
     Site            127..130
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206710"
     Site            order(139..140,143,147,155)
                     /site_type="active"
                     /note="alternate GDI interaction site [active]"
                     /db_xref="CDD:206710"
     Site            157..159
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206710"
     CDS             1..206
                     /gene="RALA"
                     /coded_by="XM_041466483.1:42..662"
                     /db_xref="GeneID:121352996"
ORIGIN      
        1 maankpkgqn slalhkvimv gsggvgksal tlqfmydefv edyeptkads yrkkvvldge
       61 evqidildta gqedyaaird nyfrsgegfl cvfsiteles faatadfreq ilrvkedenv
      121 pfllvgnksd ledkrqvsve eaknradqwn vnyvetsakt ranvdkvffd lmreirarkm
      181 edskekngkk krkslakrir erccil
//
LOCUS       XP_041322418             302 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein MOX-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322418
VERSION     XP_041322418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466484.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="homeobox protein MOX-2"
                     /calculated_mol_wt=33309
     Region          150..271
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          186..242
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..302
                     /gene="MEOX2"
                     /coded_by="XM_041466484.1:411..1319"
                     /db_xref="GeneID:121352997"
ORIGIN      
        1 mdhtlfgclr sphataqslh pfsqsslalh grsdhmsypd lsssssscii agypneegmf
       61 asqhhrghhh hhhhhhhhhq qqqhqalqtn whipqmsspp aaarhslclq pdsggppelg
      121 ssppvlcsns sslgtntptg aacapgdygr qalspvetek rsgkrksdss dsqegnykte
      181 vnskprkert aftkeqirel eaefahhnyl trlrryeiav nldlterqvk vwfqnrrmkw
      241 krvkggqqga aarekelvnv kkgtllpsel sgigaaglqh tgdslandds hdsdhsseha
      301 hl
//
LOCUS       XP_041322419             489 aa            linear   VRT 06-MAY-2021
DEFINITION  metalloreductase STEAP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322419
VERSION     XP_041322419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="metalloreductase STEAP2"
                     /calculated_mol_wt=55689
     Region          33..220
                     /region_name="COG2085"
                     /note="Predicted dinucleotide-binding enzyme [General
                     function prediction only]"
                     /db_xref="CDD:441688"
     Region          259..405
                     /region_name="Ferric_reduct"
                     /note="Ferric reductase like transmembrane component;
                     pfam01794"
                     /db_xref="CDD:426438"
     CDS             1..489
                     /gene="STEAP2"
                     /coded_by="XM_041466485.1:242..1711"
                     /db_xref="GeneID:121352999"
ORIGIN      
        1 mesismmgsp knlnetflph aangikdask vtigiigsgd faksltirli rcgyhvvvgs
       61 rnpkhaadff phvvdvthhe davaktniif vaihrehyts lwdlkhllag kilidvsnnt
      121 rvdqypdsna eylaslfpds livkgfnvis awslqlgpkd asrqvyicsn svqarhqvie
      181 larqlsfipi dlgalsssre ienlplrlft lwkgpvliai slatfffiys fvrdvihpym
      241 rnqqsdfyki pieivnktlp ivaitllslv ylsgliaaay qlyygtkyrr fppwldnwlq
      301 crkqlgllsf ffasvhvvys lclpmrrser ylflnmayqq vhanvenswn eeevwriemy
      361 isfgimslgl lsllavtsip svnsalnwre fsfiqstlgy iallistfhv liygwkrafe
      421 eeyyrfytpp nfvlalvlps ivilgkiill lpcvsrklrr irrgwekshv ieevsgsvph
      481 lsperitvm
//
LOCUS       XP_041322420             515 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 385D [Pyrgilauda ruficollis].
ACCESSION   XP_041322420
VERSION     XP_041322420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="zinc finger protein 385D"
                     /calculated_mol_wt=55519
     Region          89..111
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          89..111
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          202..224
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          202..224
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          324..348
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          326..348
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(333..335,337..338,342,347,394,397..401,403..404)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          387..411
                     /region_name="zf-met"
                     /note="Zinc-finger of C2H2 type; pfam12874"
                     /db_xref="CDD:463736"
     Region          389..411
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     CDS             1..515
                     /gene="ZNF385D"
                     /coded_by="XM_041466486.1:1..1548"
                     /db_xref="GeneID:121353000"
ORIGIN      
        1 magalgrgaa cwrmrsaagg rkekppgakp qprhenmkkp wspdlpvdnq aynsdftslp
       61 dregekelap dgseekkere kkhtnftlcn vcniqlnsaa qaqihyngks hqkrlkqlsn
      121 gnlksdnggt cqspalpalv rppapplqps ldikpflpfp ldtaaavnlf pnfnamdpiq
      181 kavinhtfgv plphrrkqii scnicqlrfn sdsqaaahyk gtkhakklka leamknkqks
      241 vttkdsaktt ftsittntin tssdktdant gtpaistttt veirkssvmt teitskveki
      301 pttatssstc psveteeeka krllycslck vavnsasqle ahnsgtkhkt mlearngsgt
      361 ikafpragvk gkgpvnkgnt glqnktfhce icdvhvnset qlkqhissrr hkdraagkpp
      421 kpkyspynkl qkgthplgvk lvfskepskp maprilpnpl aaaaaaaava vnspfslrta
      481 paatlfqtsa lppallrpap gpirtthtpv lfapy
//
LOCUS       XP_041322421            2245 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily C member 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041322421
VERSION     XP_041322421.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466487.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2245
                     /product="dnaJ homolog subfamily C member 13"
                     /calculated_mol_wt=254662
     Region          12..836
                     /region_name="RME-8_N"
                     /note="DNAJ protein RME-8 N-terminal; pfam19432"
                     /db_xref="CDD:466078"
     Region          981..1031
                     /region_name="GYF_2"
                     /note="GYF domain 2; pfam14237"
                     /db_xref="CDD:464112"
     Region          1306..1359
                     /region_name="DnaJ"
                     /note="DnaJ domain; pfam00226"
                     /db_xref="CDD:395170"
     Site            order(1337..1339,1345,1348..1349,1352..1353)
                     /site_type="other"
                     /note="HSP70 interaction site [polypeptide binding]"
                     /db_xref="CDD:99751"
     CDS             1..2245
                     /gene="DNAJC13"
                     /coded_by="XM_041466487.1:207..6944"
                     /db_xref="GeneID:121353001"
ORIGIN      
        1 mniirenrdl acfyttkhsw rgkykrvfsv gthaittynp ntlevtnqwp ygdicsispv
       61 gkgqgaefnl tfrkgsgkks etlkfstehr telltealrf rtdfsegkit grryncykhh
      121 wsdtrkpvil evtpggidqi dpatnkvlcs ydyrniegfv ditgyqggfc ilyggfsrlh
      181 lfaseqreei iksaiehagn figislrirk eslefeqyln lrfgkysnde sitslaefvv
      241 qkitprhlep vkrilaltea clverdpaty niatlkplge vfaivcdcen pqvftiefik
      301 gqirkysste rdsllaslld gvrasgnrdv cvkmtsthkg qrwgllsmpv deeveslhlk
      361 flaappngnf adavfrfnan isysgvlhav tqdglfsenk eklinnaita llsqegdiaa
      421 snaelesqfq avrrlvaska gflaftqlpk frerlgvkvv kalkrnndgv thasidmlca
      481 lmcpmhddyd lrqeqlnkas llsskkflen llekfnshvd hgtgalviss lldfltfalc
      541 apysettegq qfdmllemva sngrtlfklf qhpsmaivkg aglvmkaiie egdkeiatkm
      601 qdlalsegal prhlhtamft vstdqrmltn rqlsrhlvgl wtaenktamn llkrilppgl
      661 layldsadpv pekdadrmhv rdnlkiatdq ygkfnkvpew qrlagkaake vekfakekvd
      721 lvlmhwrdrm giaqkedrnn mniiqkpvil rkrrqrikie anwdlfyyrf vqdharsnli
      781 wnfktreelr dtlesemraf nidrelgsan viswnhqefe vkyeclseei kigdyylrll
      841 leedeteesg aikrsyeffn elyhrflltp kvnmkclclq alaivygrch eeigpfsdtk
      901 yivgmlerct drlerdrlil flnklilnkr nvkdlmdsng irilvdlltl ahlhtsratv
      961 plqsnvieaa pdakreseke wyfgnadker sgpysfqemq elwnngkvts ktrcwaqgmd
     1021 gwrplqvipq lkwcllasgq pvlnetdlat lvlnmlitmc gyfpsrdqdn aiirplprvk
     1081 rllsdstclp hitqllltfd pilvekvavl lshvmqdnpq lprfylsgvf ffimmytgsn
     1141 vlpiarflky thtkqafkse etksqdivqr silghilpea mvcylenyep ekfseiflge
     1201 fdtpeaiwsn emrrlmieki aahladftpr lqsntralyq ycpipvinyp qlenelfcni
     1261 yylkhlcdtl kfpdwpikdp vkllkdtlea wrkevekkpp tmsiddayev lnlprgqgqn
     1321 deskirkayf rlaqkyhpdk npegrdmfek vnkayeflct ksakvidgpd peniililkt
     1381 qsilfnrhke dlkpykyagy pmliktitie tsddllfske spllpaatel afhtvscsal
     1441 naeelrresg ievlqeafnr cvavltrssk pddmsvqvcg yiskcysvaa qfeecrekit
     1501 empniikdlc rllyygktip rvaalgvecv ssfaldywlq thlfqagvlw yllgylfnyd
     1561 ytleesgiqk sedsnhqeva nslaklslla lsrlggylsd eqatpenpai rkslagmltp
     1621 yiarklavvs ptetlkmlns ntenpyliwn ngtraellef lesqqesmvk rgdcdksygs
     1681 dfvfsdhake livgevfvrv ynevptfqle lpkafaasll dyvgsqaqyl htlmaitqtg
     1741 kvesnqhgdr lrrvemalea lrnvikhnpg sececighfk lifsllrvhg aglvqqlale
     1801 vvnivtsnqe cvnniaeamv lanllallhs lpssrqlvle tlyaltsstk iikeamakga
     1861 liylldmfcn sthpqvraqt aelfakmtad klvgpkvrit lmkflpgvfm damrdnpeaa
     1921 vhifegthen peliwndssr ervsttvrem mlehfklqrd npdtnwklpe dfavvygeae
     1981 gelsvggvfl rifiaqpawv lrkpreflia llekftelle knnphgetle tittatvclf
     2041 saqpqladqv pplghlhkii qamnhknnai pksairvmhi lsdnelcvra masletigpl
     2101 mngmkkrpdv vgiacetlnr mfqkeqtdlv aqalkadlvp yllkllegvg lenlespsat
     2161 kaqivktlks msrslqygeq vneilsrssv wsafkdqkhd lfisdtqtsg yltgpgvagy
     2221 ltagttssvm pnvpppvdne vgdvs
//
LOCUS       XP_041322422             307 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 25 member 40 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322422
VERSION     XP_041322422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..307
                     /product="solute carrier family 25 member 40 isoform X1"
                     /calculated_mol_wt=34073
     Region          10..127
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          144..211
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          208..298
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..307
                     /gene="SLC25A40"
                     /coded_by="XM_041466488.1:146..1069"
                     /db_xref="GeneID:121353003"
ORIGIN      
        1 maemsdinvq kltivqqaia sccgailtsl fvtpldvikt rlqaqgnpfh dgkcfvyssg
       61 hmdhvyvcen gdskawykkp ghfkgtldaf vkiiriegik slwsglpptl imavpttaiy
      121 ytcydqlcea lknrpgkhde hipviagsls rfgsatvvsp lelirtqmqy rrssykqlyl
      181 rvstkvavdg wlslwqgwts tilrdvpfsg aasgsiaavv tqpfdvvkth rqtqlwenet
      241 lkipqrdsks twavmrkiaa rngiaglfag itprlfkvap acaimistye ygksffshln
      301 ekknqhp
//
LOCUS       XP_041322423             277 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 25 member 40 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322423
VERSION     XP_041322423.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466489.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="solute carrier family 25 member 40 isoform X2"
                     /calculated_mol_wt=31280
     Region          <17..66
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          83..165
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          169..268
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..277
                     /gene="SLC25A40"
                     /coded_by="XM_041466489.1:153..986"
                     /db_xref="GeneID:121353003"
ORIGIN      
        1 mdhvyvceng dskawykkpg hfkgtldafv kiiriegiks lwsglpptli mavpttaiyy
       61 tcydqlceal knrpgkhdeh ipviagslsr fgsatvvspl elirtqmqyr rssykqlylr
      121 vstkvavdgw lslwqgwtst ilrdvpfsam ywynyerfkk mmckkvgane ptffvsftsg
      181 aasgsiaavv tqpfdvvkth rqtqlwenet lkipqrdsks twavmrkiaa rngiaglfag
      241 itprlfkvap acaimistye ygksffshln ekknqhp
//
LOCUS       XP_041322424             421 aa            linear   VRT 06-MAY-2021
DEFINITION  prostatic acid phosphatase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322424
VERSION     XP_041322424.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466490.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..421
                     /product="prostatic acid phosphatase-like"
                     /calculated_mol_wt=48558
     Region          32..335
                     /region_name="HP_HAP_like"
                     /note="Histidine phosphatase domain found in histidine
                     acid phosphatases and phytases; contains a His residue
                     which is phosphorylated during the reaction; cd07061"
                     /db_xref="CDD:132717"
     Site            order(41..42,45,109,291..292)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132717"
     CDS             1..421
                     /gene="LOC121353004"
                     /coded_by="XM_041466490.1:1..1266"
                     /db_xref="GeneID:121353004"
ORIGIN      
        1 mgvirlpsls rilcfsfhii lillqqttaa relkfvvvlf rhgdrtpivn fptdlhkese
       61 wpqgfgqltk tgmqqlfelg qymrkryssf lnstynrqef yiqstdydrt imsaqsylsg
      121 lfpptssqiw npdllwqpip vhifqktaeq rlnfplpncp rfdelqqetq tskefqsriq
      181 pykdflqtma vntglelnhl kildnfqlwn tydtlhcegi hnytlpvwat edviskmekl
      241 aelsllslfg vykteeksrl qggvlvniil nsikqaanss kptkmevysa hdttvgalqi
      301 alnifngklp pyaacqffel yqdrngqysi emyyrndtsk dpylltlpgc tsscplekfa
      361 elvspviten wskecgkkdk mkdifigfnv avgllsifnl vllyllyhyg rcrsrnnyqd
      421 i
//
LOCUS       XP_041322425             330 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor 141 [Pyrgilauda ruficollis].
ACCESSION   XP_041322425
VERSION     XP_041322425.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466491.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..330
                     /product="probable G-protein coupled receptor 141"
                     /calculated_mol_wt=38092
     Region          47..320
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          48..72
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          81..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          118..140
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          163..179
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          206..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          253..275
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          287..312
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..330
                     /gene="GPR141"
                     /coded_by="XM_041466491.1:388..1380"
                     /db_xref="GeneID:121353005"
ORIGIN      
        1 mssvrlqdys lskrqnmfqe dfrnmtegtr nssdsssafv htstvsailv tvysvalagg
       61 gigsitmsfv llkmntlsvt ttaiinlvvv hslllftvpf rlhyyvkkkw vfdmpfckmv
      121 samvhihmyl tfvfyvitlv irwliffqwk dkvefyrklh aigasaavwl fvmvfgvplf
      181 yfeygrsgly nnttcfkfhk elqhesvkal nytvivaval iscvllslqi filvkvarkf
      241 stslcshqef waqvknlifi wiiiiwflpy hlfrayyiqh vsdfdqlesy nevflsltal
      301 scldllsfvl sgsrffkqnv gmlhrrlpcc
//
LOCUS       XP_041322426             596 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol-3-phosphatase SAC1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322426
VERSION     XP_041322426.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466492.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="phosphatidylinositol-3-phosphatase SAC1 isoform
                     X1"
                     /calculated_mol_wt=67724
     Region          66..528
                     /region_name="COG5329"
                     /note="Phosphoinositide polyphosphatase (Sac family)
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:227637"
     CDS             1..596
                     /gene="SACM1L"
                     /coded_by="XM_041466492.1:113..1903"
                     /db_xref="GeneID:121353006"
ORIGIN      
        1 mataapvgtt aaaayaslkl hitpekfyve acddgaddvl aidrvstevt ltvkkdvpps
       61 avtrpifgil gtirlvagty livitkkkkv geifshaiwk atdfdilsyk ktmlhltdiq
      121 lqdnkvflsm lnhvlsvdgf yfsttydlth tlqrlantsp efqemsller adprfvwngh
      181 llrefiaqpe ihrfatpvmh gfitmhscsi ngkcfdwllv srrscfragv ryyvrgidse
      241 ghaanfvete qivhykgska sfvqtrgsip ffwsqrpnlk ykpkpqisks vnhmdgfqrh
      301 fdsqiisygk qmivnlvnqk gsekpleqtf skmvnsmang mvryvafdfh kecsrmrwdr
      361 lqilmdqlae qqdefsyflv dsegktvtqq egtfrsncmd cldrtnviqs llarrslqaq
      421 lqrlgvlhvg qrieeqadfe kiyknawadn anacakqyag tgalktdytr tgkrtqwgli
      481 mdgwnsliry yknnfsdgfr qdaidlflgn ysvdevepas plhvkkdwkf lalpiimvva
      541 fsmciicllm agdtwtetla yvlfwgsasf gtfaiilyng kdfvdapklv qkekmd
//
LOCUS       XP_041322427             526 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol-3-phosphatase SAC1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322427
VERSION     XP_041322427.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466493.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..526
                     /product="phosphatidylinositol-3-phosphatase SAC1 isoform
                     X2"
                     /calculated_mol_wt=60881
     Region          <58..458
                     /region_name="COG5329"
                     /note="Phosphoinositide polyphosphatase (Sac family)
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:227637"
     CDS             1..526
                     /gene="SACM1L"
                     /coded_by="XM_041466493.1:1..1581"
                     /db_xref="GeneID:121353006"
ORIGIN      
        1 mwkpvmmeqm mcllltespq kslsqlkkmf plqllqglyl vfweqsdwwq lqdnkvflsm
       61 lnhvlsvdgf yfsttydlth tlqrlantsp efqemsller adprfvwngh llrefiaqpe
      121 ihrfatpvmh gfitmhscsi ngkcfdwllv srrscfragv ryyvrgidse ghaanfvete
      181 qivhykgska sfvqtrgsip ffwsqrpnlk ykpkpqisks vnhmdgfqrh fdsqiisygk
      241 qmivnlvnqk gsekpleqtf skmvnsmang mvryvafdfh kecsrmrwdr lqilmdqlae
      301 qqdefsyflv dsegktvtqq egtfrsncmd cldrtnviqs llarrslqaq lqrlgvlhvg
      361 qrieeqadfe kiyknawadn anacakqyag tgalktdytr tgkrtqwgli mdgwnsliry
      421 yknnfsdgfr qdaidlflgn ysvdevepas plhvkkdwkf lalpiimvva fsmciicllm
      481 agdtwtetla yvlfwgsasf gtfaiilyng kdfvdapklv qkekmd
//
LOCUS       XP_041322428             185 aa            linear   VRT 06-MAY-2021
DEFINITION  M-phase-specific PLK1-interacting protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322428
VERSION     XP_041322428.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466494.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="M-phase-specific PLK1-interacting protein"
                     /calculated_mol_wt=19738
     Region          131..185
                     /region_name="MPLKIP"
                     /note="M-phase-specific PLK1-interacting protein;
                     pfam15502"
                     /db_xref="CDD:434761"
     CDS             1..185
                     /gene="LOC121353008"
                     /coded_by="XM_041466494.1:193..750"
                     /db_xref="GeneID:121353008"
ORIGIN      
        1 myrpgfrapt ppyagggfrs ppsgggplpp sprgygsphh tppyghrpgp ygsglsprgp
       61 gfhgrfgsps pgaqtprrpq svsprypapy graspagapl hpppqhkrsp ggfqrhfqgs
      121 prtstpfgta hgrekrvsnd venyyrpsml edpwaglepv svtdinqqys svqttctakk
      181 gryfs
//
LOCUS       XP_041322429            1120 aa            linear   VRT 06-MAY-2021
DEFINITION  anillin [Pyrgilauda ruficollis].
ACCESSION   XP_041322429
VERSION     XP_041322429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466495.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1120
                     /product="anillin"
                     /calculated_mol_wt=123601
     Region          135..219
                     /region_name="Anillin_N"
                     /note="Anillin N-terminus; pfam16018"
                     /db_xref="CDD:435074"
     Region          406..>454
                     /region_name="Anillin_N"
                     /note="Anillin N-terminus; pfam16018"
                     /db_xref="CDD:435074"
     Region          778..931
                     /region_name="Anillin"
                     /note="Cell division protein anillin; pfam08174"
                     /db_xref="CDD:462393"
     Region          980..1106
                     /region_name="PH_anillin"
                     /note="Anillin Pleckstrin homology (PH) domain; cd01263"
                     /db_xref="CDD:269964"
     CDS             1..1120
                     /gene="ANLN"
                     /coded_by="XM_041466495.1:42..3404"
                     /db_xref="GeneID:121353009"
ORIGIN      
        1 mdpfteklle rtrarrenlq rkmaerpkmg arptmqtkra replaetgnq aplpgdeakp
       61 dtkpspskrl cpndieaqas ssenvqpvps sstshdsaqm tsesqetisn raslvqplek
      121 vnqntksetp aalsvktrmq klaeqrrcwd sedpsecvpl splqskdlcv sppkqtsnal
      181 asetpigrrg rlanlaatig sweddlshps akqnnaqeqp gttclsklst tsgasarins
      241 ssvkqeaasc sqrlveasin kpanskradp nnfltpssrv tapcskesev qqeptenpcs
      301 prkteectqt aksalpqpvq skaepvkgth vqlepkgkpt tpggsgikpf lerfgercqe
      361 rsarspatnt pacrtptvtp ntrtiqerll kqnensstas lalqlkqere relaclrgrf
      421 drgnlwsaek sgsskrklpe akmesqsqas skhppssdas algsedtsag dkpakspsve
      481 ssdtskceet dkssplktae skspvkamsv skleqldekp kgevyegkmh vdgemngskv
      541 ineifeilqe dgpdieklkk emsmsleges dedeqeesln issmslltpl vesvgseafg
      601 spskstgegs sisdvslkse kfqrtrvpra esgdsigsvs edrnlpysvd ayrsqrfket
      661 drpsikqiiv rkedvasrle mrrngpsdqv nikkkmqeln neinmqqtvi yqasqalncc
      721 fdeehgkgsq eeaeaerlll fatekrtall eelnklkseg phnkrnkaas tsaefapsrg
      781 svsisemrlp lkadfvcgta qkpeagnyyy viilrsgaen mvatplasta sslngdaltf
      841 tttftmhdvs ndfeinievy swvqrkegts tdkrkksnks kvitpkrllt sitsksnllt
      901 pamaspggpn airstnfilv gshklslssv gntkfaldki nfegeekell gymfqdkvpf
      961 lspleghiyl klkcqvdslv eekgfltmfe dvsgfgawhr rwcvlsgnci sywtypddek
     1021 rkhplgrinl anctnhqiep anrefcarpn tfelitvrpq reddretlvs qcrdtlcvtk
     1081 nwlsadtkee rnlwmqklnq vlidlrmwqp dacykpagkl
//
LOCUS       XP_041322430             182 aa            linear   VRT 06-MAY-2021
DEFINITION  pituitary tumor-transforming gene 1 protein-interacting
            protein-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322430
VERSION     XP_041322430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="pituitary tumor-transforming gene 1
                     protein-interacting protein-like isoform X1"
                     /calculated_mol_wt=20854
     CDS             1..182
                     /gene="LOC121353010"
                     /coded_by="XM_041466496.1:104..652"
                     /db_xref="GeneID:121353010"
ORIGIN      
        1 meaarwwplw lpglallcgr avagleirtt vppapaqacs afsqksceec lknvsclwcy
       61 tnntcidypv rsifppsslc slsnarwgvc winfealiia mavvaglilv sitvcccycc
      121 ycrrrsrsrl eeeeeqlark reerrlqslq rkherklkhd eirkkygllq dsdnpysrfe
      181 ne
//
LOCUS       XP_041322431             181 aa            linear   VRT 06-MAY-2021
DEFINITION  pituitary tumor-transforming gene 1 protein-interacting
            protein-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322431
VERSION     XP_041322431.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466497.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..181
                     /product="pituitary tumor-transforming gene 1
                     protein-interacting protein-like isoform X2"
                     /calculated_mol_wt=20767
     CDS             1..181
                     /gene="LOC121353010"
                     /coded_by="XM_041466497.1:106..651"
                     /db_xref="GeneID:121353010"
ORIGIN      
        1 meaarwwplw lpglallcgr avagleirtt vppapaqacs afsqksceec lknvsclwcy
       61 tnntcidypv rsifppsslc slsnarwgvc winfealiia mavvaglilv sitvcccycc
      121 ycrrrsrrle eeeeqlarkr eerrlqslqr kherklkhde irkkygllqd sdnpysrfen
      181 e
//
LOCUS       XP_041322432             168 aa            linear   VRT 06-MAY-2021
DEFINITION  pituitary tumor-transforming gene 1 protein-interacting
            protein-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322432
VERSION     XP_041322432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="pituitary tumor-transforming gene 1
                     protein-interacting protein-like isoform X3"
                     /calculated_mol_wt=19132
     CDS             1..168
                     /gene="LOC121353010"
                     /coded_by="XM_041466498.1:109..615"
                     /db_xref="GeneID:121353010"
ORIGIN      
        1 meaarwwplw lpglallcgr avagleirtt vppapaqacs afsqksceec lknvsclwcy
       61 tnntcidypv rsifppsslc slsnarwgvc winfealiia mavvaglilv sitvcccycc
      121 ycrrrsrsrl eeeeeqlark reerrlqslq rkherklkhd eirkkygs
//
LOCUS       XP_041322433             147 aa            linear   VRT 06-MAY-2021
DEFINITION  pituitary tumor-transforming gene 1 protein-interacting
            protein-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322433
VERSION     XP_041322433.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466499.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="pituitary tumor-transforming gene 1
                     protein-interacting protein-like isoform X4"
                     /calculated_mol_wt=16931
     CDS             1..147
                     /gene="LOC121353010"
                     /coded_by="XM_041466499.1:107..550"
                     /db_xref="GeneID:121353010"
ORIGIN      
        1 meaarwwplw lpglallcgr avagleirtt vppapaqacs afsqksceec lknvsclwcy
       61 tnntcidypv rsifppsslc slsnarwgvc wssrleeeee qlarkreerr lqslqrkher
      121 klkhdeirkk ygllqdsdnp ysrfene
//
LOCUS       XP_041322434             435 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322434
VERSION     XP_041322434.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466500.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..435
                     /product="ankyrin repeat and SOCS box protein 4 isoform
                     X1"
                     /calculated_mol_wt=49010
     Region          79..303
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          86..113
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          115..146
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(148,150,154..155,158..160,162..163,167,170,181,183,
                     185,189..190,193..195,197..198,202,205,214,216,218,
                     222..223,226..228,241..242,246,249,258)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          148..181
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          183..214
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          216..258
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          260..291
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          293..325
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          388..435
                     /region_name="SOCS_ASB4_ASB18"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB4 and ASB18 proteins. ASB family members have a
                     C-terminal SOCS box and an N-terminal ankyrin-related
                     sequence. Asb4 was identified as imprinted gene in mice.
                     The general function of the SOCS box is the...; cd03723"
                     /db_xref="CDD:239693"
     Site            order(389..394,400,410,416,421)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239693"
     CDS             1..435
                     /gene="ASB4"
                     /coded_by="XM_041466500.1:90..1397"
                     /db_xref="GeneID:121353011"
ORIGIN      
        1 mdleetykeg entegkisra aaaklvkkaf lealksndfe tleellsqkk idvdtvfeve
       61 denlilasyk qgywlpsykl kiswatglhi avmyghlesl lvllnhkati ncrpngkaai
      121 hiacemanve clkilcnhga klncfsmsgq aplhfcttrt smpcaqqllw rganvnirtn
      181 nkdeetplhv varlgvpelv afyveqgaqv dalnaymetp lacaaywalh ykdqiysqdh
      241 hlicrmlldy kaevnarded fksplhkaaw ncdhvllhml leagaeanim dvngcaplqy
      301 iikvtsvrpa aqpdicyqll lnhgaariyp lqfhkvlqac hshpravevv vnsyehikst
      361 skwkaaiped vlqrhqdfyd slftvcsnsp rslmhlcrca irailsekch revpllsipl
      421 smkkylllep egiiy
//
LOCUS       XP_041322435             380 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322435
VERSION     XP_041322435.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466501.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="ankyrin repeat and SOCS box protein 4 isoform
                     X2"
                     /calculated_mol_wt=42808
     Region          1..248
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          31..58
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          60..91
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(93,95,99..100,103..105,107..108,112,115,126,128,130,
                     134..135,138..140,142..143,147,150,159,161,163,167..168,
                     171..173,186..187,191,194,203)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          93..126
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          128..159
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          161..203
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          205..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          238..270
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          333..380
                     /region_name="SOCS_ASB4_ASB18"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB4 and ASB18 proteins. ASB family members have a
                     C-terminal SOCS box and an N-terminal ankyrin-related
                     sequence. Asb4 was identified as imprinted gene in mice.
                     The general function of the SOCS box is the...; cd03723"
                     /db_xref="CDD:239693"
     Site            order(334..339,345,355,361,366)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239693"
     CDS             1..380
                     /gene="ASB4"
                     /coded_by="XM_041466501.1:224..1366"
                     /db_xref="GeneID:121353011"
ORIGIN      
        1 mlilhhgflm llaketgywl psyklkiswa tglhiavmyg hlesllvlln hkatincrpn
       61 gkaaihiace manveclkil cnhgaklncf smsgqaplhf cttrtsmpca qqllwrganv
      121 nirtnnkdee tplhvvarlg vpelvafyve qgaqvdalna ymetplacaa ywalhykdqi
      181 ysqdhhlicr mlldykaevn ardedfkspl hkaawncdhv llhmlleaga eanimdvngc
      241 aplqyiikvt svrpaaqpdi cyqlllnhga ariyplqfhk vlqachshpr avevvvnsye
      301 hikstskwka aipedvlqrh qdfydslftv csnsprslmh lcrcairail sekchrevpl
      361 lsiplsmkky lllepegiiy
//
LOCUS       XP_041322436             380 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322436
VERSION     XP_041322436.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466502.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="ankyrin repeat and SOCS box protein 4 isoform
                     X2"
                     /calculated_mol_wt=42808
     Region          1..248
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          31..58
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          60..91
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(93,95,99..100,103..105,107..108,112,115,126,128,130,
                     134..135,138..140,142..143,147,150,159,161,163,167..168,
                     171..173,186..187,191,194,203)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          93..126
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          128..159
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          161..203
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          205..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          238..270
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          333..380
                     /region_name="SOCS_ASB4_ASB18"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB4 and ASB18 proteins. ASB family members have a
                     C-terminal SOCS box and an N-terminal ankyrin-related
                     sequence. Asb4 was identified as imprinted gene in mice.
                     The general function of the SOCS box is the...; cd03723"
                     /db_xref="CDD:239693"
     Site            order(334..339,345,355,361,366)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239693"
     CDS             1..380
                     /gene="ASB4"
                     /coded_by="XM_041466502.1:156..1298"
                     /db_xref="GeneID:121353011"
ORIGIN      
        1 mlilhhgflm llaketgywl psyklkiswa tglhiavmyg hlesllvlln hkatincrpn
       61 gkaaihiace manveclkil cnhgaklncf smsgqaplhf cttrtsmpca qqllwrganv
      121 nirtnnkdee tplhvvarlg vpelvafyve qgaqvdalna ymetplacaa ywalhykdqi
      181 ysqdhhlicr mlldykaevn ardedfkspl hkaawncdhv llhmlleaga eanimdvngc
      241 aplqyiikvt svrpaaqpdi cyqlllnhga ariyplqfhk vlqachshpr avevvvnsye
      301 hikstskwka aipedvlqrh qdfydslftv csnsprslmh lcrcairail sekchrevpl
      361 lsiplsmkky lllepegiiy
//
LOCUS       XP_041322437             374 aa            linear   VRT 06-MAY-2021
DEFINITION  prostatic acid phosphatase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322437
VERSION     XP_041322437.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466503.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="prostatic acid phosphatase-like"
                     /calculated_mol_wt=44069
     Region          32..332
                     /region_name="HP_HAP_like"
                     /note="Histidine phosphatase domain found in histidine
                     acid phosphatases and phytases; contains a His residue
                     which is phosphorylated during the reaction; cd07061"
                     /db_xref="CDD:132717"
     Site            order(41..42,45,109,288..289)
                     /site_type="active"
                     /note="catalytic core [active]"
                     /db_xref="CDD:132717"
     CDS             1..374
                     /gene="LOC121353013"
                     /coded_by="XM_041466503.1:41..1165"
                     /db_xref="GeneID:121353013"
ORIGIN      
        1 mrarqlvcgi wslcflfclf ciflhqttak rklkfvslvf rhgdhtpqef fptnkhkeia
       61 rqqgygqltk lgiqqqyelg qymrrryshf lsvvykqyei yvqstdsdht lmsaqaslag
      121 lypptqdqiw nprilwqpip vhtmplsqdn llylpfshcp kykellretf atkdfqrqfk
      181 hykqflkfla thtgyplkkl tsekiwklsd tlhyedinny tlpvwathgv rtkliklsel
      241 llqaefgvhk qiqksrlqgg illktilkhi ldarkpsyhq kivmysthaa tiaalqmaln
      301 vfngklpphs achffelyre kngqytiemy yrnnslreph pltlpgckfr cplerfthlv
      361 spilvpywtr ecrm
//
LOCUS       XP_041322438             457 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041322438
VERSION     XP_041322438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466504.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..457
                     /product="C-C chemokine receptor type 9"
                     /calculated_mol_wt=51092
     Region          115..394
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          117..141
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          150..171
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          186..208
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          233..249
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          278..301
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          319..341
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          362..387
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..457
                     /gene="CCR9"
                     /coded_by="XM_041466504.1:1..1374"
                     /db_xref="GeneID:121353014"
ORIGIN      
        1 maggsqetaa sadgsagkrp aqdghpssss sslrtgtrqr rstppspass cpslpghpla
       61 arrvlvrpcg wvthpgkssl dyyrndsmvl slcenpvnst dfmcdkrqvr qfaqaflpvf
      121 fwlmfavgtv gntlvilvyc kyhfrrsmmd lyllhlaiad llllftfpfw akaasdgwif
      181 kdfmckvvns mykinfygcs llltcisfdr yitvvqamka kncrqrwllr srlmclavwl
      241 tsvslcipel iysqstqvgd vtvckimypp nvsvifrvmv lalkviigff lplivmvicy
      301 aliintllqa krfqkqkslk iitmiltafl lsqfpynivl lvkaintytg vvhscqaanq
      361 ldiglqvtqi iaflhsclnp flyvfagerf rmalgrmmqs cgccwsrgqe pssacdsqeh
      421 ssnwsfamlg grrvrnslil nthwtssvms ppckvil
//
LOCUS       XP_041322439             965 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane channel-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322439
VERSION     XP_041322439.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466505.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..965
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..965
                     /product="transmembrane channel-like protein 2"
                     /calculated_mol_wt=109683
     Region          620..735
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..965
                     /gene="TMC2"
                     /coded_by="XM_041466505.1:1..2898"
                     /db_xref="GeneID:121353015"
ORIGIN      
        1 mlprevvdvl slekfkvsld rsmsnlvyvk mslltavele qmafkagief dgevetdtes
       61 eedkvkdkkt nkqplretgr asrlqskkqe kdkeenedke edeskeedng sqqnrasrrk
      121 nyqrknrdgk kareegsqkk drgkvapnkd qkesenkekk ttksgkegen kqkkgrknst
      181 ssassnssde eslseeelam lkeqveqkkk listmrnkpw rmvkklsvlr eaqdfvekfe
      241 galgkgkgkk lyaykmmmak kwvkfkrdfe nfktqcipwe mkikeveshf gssvasyfif
      301 lrwmygvnlv lfglifglvi ipevlmgmpy gslprktvpr aeqatamdfs vlwdfegyik
      361 ysalfygyyn nqrtigwlky rlpmayfmvg isvfgyslmv virsmarnan estadgddgn
      421 fifswkmfts wdylignpet adnkfasitt sfkesivdeq esnkdenihl rrflrvlanv
      481 liicclcgsg yliyfvvkrs qtfskmqnvg wyerneveiv msllgmfcpp lfetiaalen
      541 yhpriglkwq lgrifalflg nlytfllalm ddvneklsee davknithwt llghqnssag
      601 ndstvtpppl dpadvprgpc wettvgiefv rltvsdilvt yitilvgdfi racfvrfvny
      661 cwcwdleagf psyaefdisg nvlglvfnqg miwmgsfyap glvginvlrl ltsmyfqcwa
      721 vmssnvphar vfkasksnnf ymgllllilf lsllpvayti mslppsfdcg pfsgkkrmyd
      781 viqetieldf plfvakifsy vanpgliipa illmvltiyy lnavskayqr antelkkkmq
      841 mqreeeknkr nnkassnpml edledlltps tktespskqa edkkieslng ssparkpgrg
      901 evlagspmss grgaafipps qvfvtqprtl girapypgqp rpwgqplgpv pgrgrgqpwy
      961 pqaar
//
LOCUS       XP_041322441             117 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 42, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322441
VERSION     XP_041322441.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466507.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..117
                     /product="transmembrane protein 42"
     CDS             1..117
                     /gene="TMEM42"
                     /coded_by="XM_041466507.1:<1..354"
                     /db_xref="GeneID:121353016"
ORIGIN      
        1 gavaaaaakl algpggeaag gpllvllrli cvglvfvcna vmwtvftkal rlssssaaas
       61 vtttasnfis sailgrllfr etwtplwwvg lamtvcgltl lhtaapqlvp vpvekke
//
LOCUS       XP_041322442             592 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium- and chloride-dependent transporter XTRP3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322442
VERSION     XP_041322442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..592
                     /product="sodium- and chloride-dependent transporter
                     XTRP3"
                     /calculated_mol_wt=66371
     Region          2..577
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     Site            order(20,23,402,405..406)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271356"
     CDS             1..592
                     /gene="SLC6A20"
                     /coded_by="XM_041466508.1:1..1779"
                     /db_xref="GeneID:121353017"
ORIGIN      
        1 meksrplwdn plqfvfacis yavglgnvwr fpylcqmygg ggflipylim liaegmplly
       61 lelavgqrmr qgsigawkii spylcgvgva svvvsfflsm yynvinawaf wylfhsfqdp
      121 lpwatcpins nrtgyeeece ktsstqyfwy rqtlnispsl easgsvqweq alcltlawlv
      181 vylcilrgta stgkvvyvta slpycvliiy lirgltlhga vngliymftp kleqlsnpkt
      241 wisaatqiff slglgfgsli afasynepsn ncqrhaiivs linsttsifa sivtfsiygf
      301 katfnyesci nkvillllna fdleegslta dnlnemkdyl matypqeyaq lapqikncsl
      361 eaeldtavqg tglafivyse aiknmevpql ysvlyffmll mlgigsmlgn taailtpltd
      421 srviasrfpk evisgvvcfv nciigliftm eagnywfdif ndyaatlsll livlvetiav
      481 cyiygirrfe kdlytmmgsk pnwywkimwa fvsplliisl fifyltdyil tgtlqyqawd
      541 atqgqlvtkd ypgyalavig llvasstmci plgalmtfir krmkrervst va
//
LOCUS       XP_041322443             782 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353018 [Pyrgilauda ruficollis].
ACCESSION   XP_041322443
VERSION     XP_041322443.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466509.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..782
                     /product="uncharacterized protein LOC121353018"
                     /calculated_mol_wt=88014
     CDS             1..782
                     /gene="LOC121353018"
                     /coded_by="XM_041466509.1:1..2349"
                     /db_xref="GeneID:121353018"
ORIGIN      
        1 mntastsesg systnhpgpf iyaqssaqqp ypnpwclsya yspycvpapg frsgnpyfpf
       61 ysvalheypr ffvpqhpvha rinrrpyfng appspmfyha trfrhynssg kkmetketqt
      121 dprqpeskqk rhqdirtetk gcdagntacv spgigtetet tsekqdsfgs sivvdrefhn
      181 knpasstqyr nlptgsyafe keevrieygn gspaiqlwks fketiplydv asgkpvpeni
      241 vphdlfslss cegllygphe genmlpgasl derkavvaak qgaeavqekd vqnnevklda
      301 ekmaksppge tmavqitela rsvgvdqqvv iakksstkra agsktsqeep sfiqqagllp
      361 snmevmsdfq qkklnlshna tnerqteksi wcdksiekfa pssswlacld smdtnynacl
      421 pqrkrrsvis lssddmssge egsstdnapv syfvpdnvlq ksmytlqkst dgleqikhgg
      481 spnvdeavgk eqvnslndqd vnssntkike asskgrklga lsrsssrkev dspnkkatks
      541 lsevedseey sakgeeedge deydgdeddd ideieyffqe appygilrps kgnfyqvgqr
      601 vlwkpstnav paqliswpaq ekiktrsglv enigvvykpr kreqdevysd ygyygrkrpm
      661 trreglehqr mlwkflrgrl lrenmgippe eywirsgakp rftsqirgsf spparskeqv
      721 cpplvkpkkk rmgkppskrr dmrheveeve mwelpkhsth kgwytvtsyk ndcyehffyl
      781 gd
//
LOCUS       XP_041322444             328 aa            linear   VRT 06-MAY-2021
DEFINITION  basic proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322444
VERSION     XP_041322444.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466510.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 39% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=34493
     CDS             1..328
                     /gene="LOC121353019"
                     /coded_by="XM_041466510.1:1..987"
                     /db_xref="GeneID:121353019"
ORIGIN      
        1 mgiagmnrvk gsstgkdred reqvnspkqc plaasplrpg prlrgriher agqppppppr
       61 sgagsapgrr kaggpgptap apvprgvtqc raprrslrvl pgqarlgqas lrhnaaaslh
      121 spasrvpqsq ghvrpplppp pgpdpppppp ppgaargsrr hrpsqpprpg srragepglr
      181 lpapagpgga gpwprppaep argggrptdr siaislaarp cpargvvaat ppqvspvpee
      241 lkdelkdlev mvdgklnmsr qvcalkpksq snlgcikssi gasrarevil plysslvrpq
      301 leccvqfwcp qhkkdmqlle qakrrprs
//
LOCUS       XP_041322445             497 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol 1,4,5-trisphosphate receptor-interacting protein-like 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322445
VERSION     XP_041322445.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466511.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="inositol 1,4,5-trisphosphate
                     receptor-interacting protein-like 1"
                     /calculated_mol_wt=58401
     CDS             1..497
                     /gene="LOC121353020"
                     /coded_by="XM_041466511.1:1..1494"
                     /db_xref="GeneID:121353020"
ORIGIN      
        1 mdswvllllf llsvvqypqp mgdvldevmr lqmelrakfq eqeriwlere veqlmlmqsg
       61 aswrdllwsa lqpwqvwpfa gllvlllavw fmwrkrscea eisgeeekek kkeeeeedet
      121 waydlrwlle eriqwpvqdl qtgcnrtmal innfttvlrr slsgtfypvl qeaigfgsaf
      181 egwtareeei vyqvlvpltp plghifhleh dtdqqkpgrn frvrvelecr cpreyqgmnm
      241 lcfqhhpdvi rrrtrqpnll dtlctgsyld vkktvhwfca lvgatwrrlp qsrswhlvll
      301 pskrscnlrl tngqetfqvk vligmqrhis difissryrg aqtpstmwpe tyavaetkff
      361 rhmarqvpqd sshlkclqll arvlarkdfs ihsiktiimh llhtvpvsqw hrrhfllqls
      421 daleqlrlsl ekkhlehfiv gnqrlpeeir lppdvqrakp pnlfhglaqd paahsqamqa
      481 yldlrhrlar vlayghc
//
LOCUS       XP_041322446             343 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353021 [Pyrgilauda ruficollis].
ACCESSION   XP_041322446
VERSION     XP_041322446.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466512.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="uncharacterized protein LOC121353021"
                     /calculated_mol_wt=37694
     Region          7..57
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(9,12,25,27,30,33,44,47)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..343
                     /gene="LOC121353021"
                     /coded_by="XM_041466512.1:1150..2181"
                     /db_xref="GeneID:121353021"
ORIGIN      
        1 matetewncp icrdipgeia svtpcvhlfc lgcivrwakr kpscplcrqa insiiysvrs
       61 eedfleivlp spsdsstahh qdeqgaaelm prafvagfpp qvwadffqdc seilepllpw
      121 lnqellellr trwwevalaq saivanlcry glseealvre lhpllqeqtv afvrrlidva
      181 adrcsdeilr qmnllnshae eeeeeqegpt aipgpsaspq gtrpptlass cspvvssvev
      241 dvgtleatlr ggpgrspsap vpaereqppe epgsraaaia spaaqgysrs tsaagrdrdc
      301 lpeglrrpak rrasgpqdsp qppkrpsrrr rhkprtldsr krk
//
LOCUS       XP_041322447            2969 aa            linear   VRT 06-MAY-2021
DEFINITION  TPR and ankyrin repeat-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322447
VERSION     XP_041322447.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466513.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2969
                     /product="TPR and ankyrin repeat-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=339339
     Region          <6..>155
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          7..35
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(8,11..12,15..16,18,52,55..56,59..60,62..63,86,
                     89..90,93..94,97)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          50..80
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          85..112
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <219..368
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          <475..>627
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          499..527
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(501..502,505..507,509..510,514,517,527,529,531,
                     535..536,541..543,545..546,555,558,576,578,580,584..585,
                     588..590,592..593,601,604,613)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          529..576
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          578..613
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <1337..1612
                     /region_name="HelD"
                     /note="DNA helicase IV [Replication, recombination and
                     repair]; COG3973"
                     /db_xref="CDD:443173"
     CDS             1..2969
                     /gene="TRANK1"
                     /coded_by="XM_041466513.1:53..8962"
                     /db_xref="GeneID:121353022"
ORIGIN      
        1 mdpmtyaqlk rqagnqdfkn gnyslaikny dealqtlgyl mqwvpctrdi avllcnksta
       61 lyclgkwkds mvlahqslqw dpeyvkayyr aghsfimlsk sneavsmfhr glvllnssad
      121 qtqiaefiag ifisvndeki lpptfypayy yifrahfnal iwqavierla qkgkwrscll
      181 llsekqelpc dlrvnqvslk nlfetselyg hgekllevae lvkwlisiga kaesiglypl
      241 havirlcika tknhlfrwll tlrpelkdri nqkdrdgqtl lhivasssey sqkrrqtedv
      301 imllnfgvdp tvpdarsryv idilkknknf davkevskqi ekitssgkqi genesatadt
      361 dslqdvleqf vqfyrcenga hnknvlkeda vkrflkwlss vkeipeeisc nisnacansf
      421 ikqllgkqmw hkvlllltgk asgenpsggg lfktcslsdv digniiqqce kldvhvhlir
      481 cllergalpd gfgtnseipl kiclrknyfe layllltkga dpqnlsvtqg dtplhaavfi
      541 clnkkdgigl nilnylldlf asrppdfpyl npniqddngn tvmhivfqrg fskqtkrive
      601 llakfdinfn iknksgkdvm hrikkrdpll eawnnatqek krhrqdragq lvktskpipa
      661 seisqskstg rsssgfslka psgnavhndl ktpcsmktkk gqlakqeteg inspltlqes
      721 lvqaitaliq qlkvsdtlkk dhslvqkpss aqtnseegrs slqpggsiah perkeddwek
      781 kkgageftma lpngekeell veekgksldi eayvqefdnm tweiectpem lktlsskavp
      841 hylkaktimt ikrlgngews rglqkplkhl kadiqlyeak lgkgarmlwe laidfsprcs
      901 espekimete qtkshleksg rvyteiiriw aivldhckln ralenicisy nrglscilrk
      961 klkgineghq nhsvttqkrv prcyvedmea ekskehtipe yfppasaael eynimkfhsf
     1021 stnmalniin dvqssvdypf rvgeleyavi dlnprpmepi iligrsgtgk ttcclyrlwk
     1081 kfysywekst laggpllerq twqqrqcsev ekassgsees elkhesdnss eeqvsdeqnq
     1141 dsegenvpvg tagaemsscg dheedqtcsa easnrlehlh qifvtknpvl crevqknfie
     1201 lsksskvtsh fkpldpsihr lqdikdenfp lfvtskqlll lldasmpdpf fprnedgslk
     1261 raivgwspqe dfvvpnwqde deegnleaeh gddggaadgc skesdpwtfv tynvfaneiw
     1321 pkmikgksly npalvwkeik sflkgsfeal scfggkltee qyknlgrkrs pnftedrsei
     1381 yylfclyqqi rsqrgyfdee dllynlsqrl sklrelpwsi hefygdeiqd ftqaelallm
     1441 kcindpnamf ltgdtaqsim kgvafrfsdl rslfhyasks svnkkqrvrk pkriyhlyqn
     1501 yrshsgilhl asgvvdllqh yfpesfdrlp qdrglfdgpk pivlescsvs dlaillrgnk
     1561 rktqpiefga hqvvlvanet akekipeels lalvltiyea kglefddvll ynfftdseas
     1621 kewkiissys pdpdeqvgsn llievpleda tgmpertpfn vemykmlnge lkqlytaitr
     1681 arvnlwifde drdkrapafk yfikrkfvkv vktdekkdld dsmfaktstp eewiaqgdyy
     1741 akhqfwevaa kcyqkggaae ksklalthda vlkvhakkss prekqmeymt laktylecge
     1801 pklslkcliq skefrlcael ckklgkmkda avyyqksqcy reasecyeli eefdlaikmy
     1861 cqeelyeeaa kaveryedml nakgqmsskl sctanqlyle aaakylsmnr teemmqvlsk
     1921 ldiedqlefl ksrgclhqta dllkskdrqe eaaklmkqhg faleaanlta ikefrascll
     1981 aeararlshg selhlgnves ilrealelce qtghksgiae avflqgalkg dfkklsdayc
     2041 qflslnhsag avealfvlcr cstpsqnvlf latrglmall slvsglkkaa tnaekdmvkl
     2101 cfayfgivpt gdscqvsqne aepiikflld kqslkerkak gdfsvstekv ksalkqhlls
     2161 rlcfitrell skkypdicmk fiaglncddk tcyhrpllrh eartifqckm hlvainglll
     2221 eatctfpkel lnqcknfedi ltsdkyasck allgmffpnh fhlrilsenp kackeilqfs
     2281 sviskpcrem lrkyitfkfn nediaarres tdlwlsamkv lilssgypee fekllyreed
     2341 nynkelmfal akakssprnk gqeektkgie grhgmllpdk naenagrthl cfirllensl
     2401 eqfyvrknpe nckrfffrfm nvlikkctry lipsigntvm llefqyilcc avlmrlaksi
     2461 tlclpksyia llhyweflfr hkdhykerkd tfsiiqeyrp qdtnaavyyf rshlcylaev
     2521 lcgvhgrfnv lldafgdpdc itsgeaertv vlclvmllna dqvqsskdrs llrhlfpeik
     2581 amlesmkkdt pskvpkrllr vveqvgdath vrevaaslqe llterdeehl vdccwkwdta
     2641 ysqghppirg iqyervnldr fvtsldetey adeleeefee vhcledqkdp levialskqq
     2701 kqeqkasaqr qlyrvfnfis lyvkwkrkah srvhpiamke eeflseifkr adidqtqcdl
     2761 cgvrfiqsse nyfsrsesme adtsepltpa essgeeklha egnaisvase aymehrntee
     2821 hmnnhaayrh yaeffrrnid piihdglgvv eeitgrdytr dhlaykegsn lrqrkikeni
     2881 kkisdaveei yekkawarae evitrhaskl vdtiddsrkw lkqmdshrit eeglvhdkdl
     2941 enevedeima feelvhkkis rkkgrhakl
//
LOCUS       XP_041322448            2387 aa            linear   VRT 06-MAY-2021
DEFINITION  TPR and ankyrin repeat-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322448
VERSION     XP_041322448.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466514.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2387
                     /product="TPR and ankyrin repeat-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=273523
     Region          <755..1030
                     /region_name="HelD"
                     /note="DNA helicase IV [Replication, recombination and
                     repair]; COG3973"
                     /db_xref="CDD:443173"
     CDS             1..2387
                     /gene="TRANK1"
                     /coded_by="XM_041466514.1:258..7421"
                     /db_xref="GeneID:121353022"
ORIGIN      
        1 mhivfqrgfs kqtkrivell akfdinfnik nksgkdvmhr ikkrdpllea wnnatqekkr
       61 hrqdragqlv ktskpipase isqskstgrs ssgfslkaps gnavhndlkt pcsmktkkgq
      121 lakqetegin spltlqeslv qaitaliqql kvsdtlkkdh slvqkpssaq tnseegrssl
      181 qpggsiahpe rkeddwekkk gageftmalp ngekeellve ekgksldiea yvqefdnmtw
      241 eiectpemlk tlsskavphy lkaktimtik rlgngewsrg lqkplkhlka diqlyeaklg
      301 kgarmlwela idfsprcses pekimeteqt kshleksgrv yteiiriwai vldhcklnra
      361 lenicisynr glscilrkkl kgineghqnh svttqkrvpr cyvedmeaek skehtipeyf
      421 ppasaaeley nimkfhsfst nmalniindv qssvdypfrv geleyavidl nprpmepiil
      481 igrsgtgktt cclyrlwkkf ysywekstla ggpllerqtw qqrqcsevek assgseesel
      541 khesdnssee qvsdeqnqds egenvpvgta gaemsscgdh eedqtcsaea snrlehlhqi
      601 fvtknpvlcr evqknfiels ksskvtshfk pldpsihrlq dikdenfplf vtskqlllll
      661 dasmpdpffp rnedgslkra ivgwspqedf vvpnwqdede egnleaehgd dggaadgcsk
      721 esdpwtfvty nvfaneiwpk mikgkslynp alvwkeiksf lkgsfealsc fggklteeqy
      781 knlgrkrspn ftedrseiyy lfclyqqirs qrgyfdeedl lynlsqrlsk lrelpwsihe
      841 fygdeiqdft qaelallmkc indpnamflt gdtaqsimkg vafrfsdlrs lfhyaskssv
      901 nkkqrvrkpk riyhlyqnyr shsgilhlas gvvdllqhyf pesfdrlpqd rglfdgpkpi
      961 vlescsvsdl aillrgnkrk tqpiefgahq vvlvanetak ekipeelsla lvltiyeakg
     1021 lefddvllyn fftdseaske wkiissyspd pdeqvgsnll ievpledatg mpertpfnve
     1081 mykmlngelk qlytaitrar vnlwifdedr dkrapafkyf ikrkfvkvvk tdekkdldds
     1141 mfaktstpee wiaqgdyyak hqfwevaakc yqkggaaeks klalthdavl kvhakksspr
     1201 ekqmeymtla ktylecgepk lslkcliqsk efrlcaelck klgkmkdaav yyqksqcyre
     1261 asecyeliee fdlaikmycq eelyeeaaka veryedmlna kgqmssklsc tanqlyleaa
     1321 akylsmnrte emmqvlskld iedqleflks rgclhqtadl lkskdrqeea aklmkqhgfa
     1381 leaanltaik efrascllae ararlshgse lhlgnvesil realelceqt ghksgiaeav
     1441 flqgalkgdf kklsdaycqf lslnhsagav ealfvlcrcs tpsqnvlfla trglmallsl
     1501 vsglkkaatn aekdmvklcf ayfgivptgd scqvsqneae piikflldkq slkerkakgd
     1561 fsvstekvks alkqhllsrl cfitrellsk kypdicmkfi aglncddktc yhrpllrhea
     1621 rtifqckmhl vainglllea tctfpkelln qcknfedilt sdkyasckal lgmffpnhfh
     1681 lrilsenpka ckeilqfssv iskpcremlr kyitfkfnne diaarrestd lwlsamkvli
     1741 lssgypeefe kllyreedny nkelmfalak akssprnkgq eektkgiegr hgmllpdkna
     1801 enagrthlcf irllensleq fyvrknpenc krfffrfmnv likkctryli psigntvmll
     1861 efqyilccav lmrlaksitl clpksyiall hyweflfrhk dhykerkdtf siiqeyrpqd
     1921 tnaavyyfrs hlcylaevlc gvhgrfnvll dafgdpdcit sgeaertvvl clvmllnadq
     1981 vqsskdrsll rhlfpeikam lesmkkdtps kvpkrllrvv eqvgdathvr evaaslqell
     2041 terdeehlvd ccwkwdtays qghppirgiq yervnldrfv tsldeteyad eleeefeevh
     2101 cledqkdple vialskqqkq eqkasaqrql yrvfnfisly vkwkrkahsr vhpiamkeee
     2161 flseifkrad idqtqcdlcg vrfiqsseny fsrsesmead tsepltpaes sgeeklhaeg
     2221 naisvaseay mehrnteehm nnhaayrhya effrrnidpi ihdglgvvee itgrdytrdh
     2281 laykegsnlr qrkikenikk isdaveeiye kkawaraeev itrhasklvd tiddsrkwlk
     2341 qmdshritee glvhdkdlen evedeimafe elvhkkisrk kgrhakl
//
LOCUS       XP_041322449            1109 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium voltage-gated channel subfamily H member 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322449
VERSION     XP_041322449.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466515.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1109
                     /product="potassium voltage-gated channel subfamily H
                     member 8"
                     /calculated_mol_wt=124374
     Region          40..135
                     /region_name="PAS_9"
                     /note="PAS domain; pfam13426"
                     /db_xref="CDD:463873"
     Region          175..>623
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     CDS             1..1109
                     /gene="KCNH8"
                     /coded_by="XM_041466515.1:1..3330"
                     /db_xref="GeneID:121353024"
ORIGIN      
        1 mpvmkgllap qntfldtiat rfdgthsnfi lanaqvakgf pivycsdgfc elagfartev
       61 mqkscsckfl lgaetneqmi lqieksleek iefkgeimfy kkngssfwcl ldivpiknek
      121 gdvvlflasf kditdtkvki aaedkkeekw kgrgragshf esarrrsrav lyhisghlqr
      181 reknklkinn nvfvdkpafp eykvsdakks kfillhfstf kagwdwlill atfyvavtvp
      241 ynvsfighde lsttrsttvs diaveilfii diilnfrtty vsksgqvife arsicihyvt
      301 twfiidliaa lpfdllyafn vtvvslvhll ktvrllrllr llqkldrysq hstivltllm
      361 smfallahwm aciwyvigkr emeqnnpltw digwlhelgk riespyyenn tlggpsirsa
      421 yiaalyftls sltsvgfgnv santdaekif sictmligal mhalvfgnvt aiiqrmysrw
      481 slyhtrtkdl kdfirvhhlp qqlkqrmley fqttwsvnng idsnellkdf pdelrsditm
      541 hlnkeilqls lfecasrgcl rslslhikts fcapgeyllr qgdalqaiyf vcsgsmevlk
      601 dstvlailgk gdliganlsi rdqviktnad vkaltycdlq ciilkglfev ldlypeyahk
      661 fvediqhdlt ynlreghesd visklsnkpt lsqtelkgng nikkrlpsiv ededeeeege
      721 eesstlspid trstnssqqk ktasskshlg rnlkqlasgt vpfhspirac ssnpsrakhe
      781 telhyysrrk eknlklylsa lttsgppdms privdgiedg nhneesqtfd fssdqlrqes
      841 rlspttgeae igaavlvika eetkqqisrl nnemtslsqe vsqlrkdmkn vmhllenllt
      901 sqkppgfcav hslsrsptld slqprvawtt hqpcshmqag nftctkaqlc rgntlcdiwn
      961 tdlssvgssp qrtepnlqns mdgelyyttg lqnspsqyqv iqkdnlqflr ctsphsdttl
     1021 tplqsisatl spsvcssset slhlalpsrs eegsfsqgai sslslenlpg swdlegtagv
     1081 tsaqtpdfpv divtstrdvk dkdcqaidv
//
LOCUS       XP_041322450             145 aa            linear   VRT 06-MAY-2021
DEFINITION  twist-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322450
VERSION     XP_041322450.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466516.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..145
                     /product="twist-related protein 1"
                     /calculated_mol_wt=15920
     Region          <62..117
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(66..67,70..71,73..74,78,88..89,92..93,96,98..99,
                     102..103)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..145
                     /gene="TWIST1"
                     /coded_by="XM_041466516.1:148..585"
                     /db_xref="GeneID:121353025"
ORIGIN      
        1 mmqqdesnsp vspaddslsn seeepdrqql pnnkrggrkr rssrrsagga vgaadepcsp
       61 aqgkrgkkea faalrkiipt lpsdklskiq tlklaaryid flyqvlqsde ldskmascsy
      121 vaherlsyaf svwrmegaws msash
//
LOCUS       XP_041322452             145 aa            linear   VRT 06-MAY-2021
DEFINITION  twist-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322452
VERSION     XP_041322452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..145
                     /product="twist-related protein 1"
                     /calculated_mol_wt=15920
     Region          <62..117
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(66..67,70..71,73..74,78,88..89,92..93,96,98..99,
                     102..103)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..145
                     /gene="TWIST1"
                     /coded_by="XM_041466518.1:148..585"
                     /db_xref="GeneID:121353025"
ORIGIN      
        1 mmqqdesnsp vspaddslsn seeepdrqql pnnkrggrkr rssrrsagga vgaadepcsp
       61 aqgkrgkkea faalrkiipt lpsdklskiq tlklaaryid flyqvlqsde ldskmascsy
      121 vaherlsyaf svwrmegaws msash
//
LOCUS       XP_041322453             242 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ZNRF2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322453
VERSION     XP_041322453.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466519.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="E3 ubiquitin-protein ligase ZNRF2"
                     /calculated_mol_wt=23811
     Region          187..242
                     /region_name="mRING-CH-C4HC2H_ZNRF2"
                     /note="Modified RING-CH finger, H2 subclass (C4HC2H-type),
                     found in zinc/RING finger protein 2 (ZNRF2) and similar
                     proteins; cd16695"
                     /db_xref="CDD:438356"
     CDS             1..242
                     /gene="ZNRF2"
                     /coded_by="XM_041466519.1:508..1236"
                     /db_xref="GeneID:121353026"
ORIGIN      
        1 mgakqsspta angrtraysg gdlpssssss sggangtggr saggggryah laaaphaapg
       61 gaaaaaagga aaagsaagsa prsrslggat asgaraaqsa fniphssgpy gsqdsvsstp
      121 eeggrerpag ggggssggpr lvigslpahl sphlfggfkc pvcskfvssd emdlhlvmcl
      181 tkprityned vlskdageca icleelqqgd tiarlpclci yhkgcidewf evnrscpehp
      241 sd
//
LOCUS       XP_041322454             377 aa            linear   VRT 06-MAY-2021
DEFINITION  1-acylglycerol-3-phosphate O-acyltransferase ABHD5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322454
VERSION     XP_041322454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="1-acylglycerol-3-phosphate O-acyltransferase
                     ABHD5"
                     /calculated_mol_wt=41629
     Region          46..373
                     /region_name="PLN02894"
                     /note="hydrolase, alpha/beta fold family protein"
                     /db_xref="CDD:215484"
     CDS             1..377
                     /gene="ABHD5"
                     /coded_by="XM_041466520.1:23..1156"
                     /db_xref="GeneID:121353027"
ORIGIN      
        1 magaaavals laalpatata appplsaadh raaamaeeea psegfgwlfs wlpawcptsl
       61 lhlkeaedkm lkciasiynk ryvyisngnk iwtltfspdl snktplvllh gfgggvglwa
      121 lnfedlcenr tvhafdllgf grssrphfdt dareaenqfv esieewrkev glekmillgh
      181 nlggflaaay slkypsrvkh lilvepwgfp erpdnaeher pipiwikalg ailspfnpla
      241 glriagpfgl slvqrlrpdf krkyssmfdd ntvaeyiyhc nvqspsgeta fknmtipygw
      301 akrpmlqris qmdrdipitv vygarscidg nsgstiqslr pnsyvktiai lgaghyvyad
      361 qpedfnekvk dicdsvd
//
LOCUS       XP_041322455             215 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-5A [Pyrgilauda ruficollis].
ACCESSION   XP_041322455
VERSION     XP_041322455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="ras-related protein Rab-5A"
                     /calculated_mol_wt=23381
     Region          20..182
                     /region_name="Rab5_related"
                     /note="Rab-related GTPase family includes Rab5 and Rab22;
                     regulates early endosome fusion; cd01860"
                     /db_xref="CDD:206653"
     Site            20..22
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206653"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206653"
     Site            order(29..35,45..46,51..52,78,133..134,136,163..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206653"
     Site            order(35..46,50..51)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206653"
     Site            order(45,50..58)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206653"
     Site            order(50,54..61,68,70)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206653"
     Site            order(53..54,56,74..75,82,84,86..88)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            53..57
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206653"
     Site            order(55..57,59,81,88..89)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206653"
     Site            70..74
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206653"
     Site            75..78
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206653"
     Site            order(78,80..90)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206653"
     Site            81..86
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206653"
     Site            89..90
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206653"
     Site            98..103
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206653"
     Site            125..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206653"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206653"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206653"
     Site            179..181
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206653"
     CDS             1..215
                     /gene="RAB5A"
                     /coded_by="XM_041466521.1:310..957"
                     /db_xref="GeneID:121353028"
ORIGIN      
        1 manrgatrpn gpnagnkicq fklvllgesa vgksslvlrf vkgqfhefqe stigaafltq
       61 tvclddttvk feiwdtagqe ryhslapmyy rgaqaaivvy ditneesfar aknwvkelqr
      121 qaspnivial agnkadlank ravdfqeaqa yaddnsllfm etsaktsmnv neifmaiakk
      181 lpknepqnag assargrgvd lteptqppks qccsn
//
LOCUS       XP_041322456             215 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-5A [Pyrgilauda ruficollis].
ACCESSION   XP_041322456
VERSION     XP_041322456.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466522.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="ras-related protein Rab-5A"
                     /calculated_mol_wt=23381
     Region          20..182
                     /region_name="Rab5_related"
                     /note="Rab-related GTPase family includes Rab5 and Rab22;
                     regulates early endosome fusion; cd01860"
                     /db_xref="CDD:206653"
     Site            20..22
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206653"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206653"
     Site            order(29..35,45..46,51..52,78,133..134,136,163..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206653"
     Site            order(35..46,50..51)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206653"
     Site            order(45,50..58)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206653"
     Site            order(50,54..61,68,70)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206653"
     Site            order(53..54,56,74..75,82,84,86..88)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            53..57
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206653"
     Site            order(55..57,59,81,88..89)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206653"
     Site            70..74
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206653"
     Site            75..78
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206653"
     Site            order(78,80..90)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206653"
     Site            81..86
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206653"
     Site            89..90
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206653"
     Site            98..103
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206653"
     Site            125..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206653"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206653"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206653"
     Site            179..181
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206653"
     CDS             1..215
                     /gene="RAB5A"
                     /coded_by="XM_041466522.1:434..1081"
                     /db_xref="GeneID:121353028"
ORIGIN      
        1 manrgatrpn gpnagnkicq fklvllgesa vgksslvlrf vkgqfhefqe stigaafltq
       61 tvclddttvk feiwdtagqe ryhslapmyy rgaqaaivvy ditneesfar aknwvkelqr
      121 qaspnivial agnkadlank ravdfqeaqa yaddnsllfm etsaktsmnv neifmaiakk
      181 lpknepqnag assargrgvd lteptqppks qccsn
//
LOCUS       XP_041322457             215 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-5A [Pyrgilauda ruficollis].
ACCESSION   XP_041322457
VERSION     XP_041322457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="ras-related protein Rab-5A"
                     /calculated_mol_wt=23381
     Region          20..182
                     /region_name="Rab5_related"
                     /note="Rab-related GTPase family includes Rab5 and Rab22;
                     regulates early endosome fusion; cd01860"
                     /db_xref="CDD:206653"
     Site            20..22
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206653"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206653"
     Site            order(29..35,45..46,51..52,78,133..134,136,163..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206653"
     Site            order(35..46,50..51)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206653"
     Site            order(45,50..58)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206653"
     Site            order(50,54..61,68,70)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206653"
     Site            order(53..54,56,74..75,82,84,86..88)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            53..57
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206653"
     Site            order(55..57,59,81,88..89)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206653"
     Site            70..74
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206653"
     Site            75..78
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206653"
     Site            order(78,80..90)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206653"
     Site            81..86
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206653"
     Site            89..90
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206653"
     Site            98..103
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206653"
     Site            125..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206653"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206653"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206653"
     Site            179..181
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206653"
     CDS             1..215
                     /gene="RAB5A"
                     /coded_by="XM_041466523.1:419..1066"
                     /db_xref="GeneID:121353028"
ORIGIN      
        1 manrgatrpn gpnagnkicq fklvllgesa vgksslvlrf vkgqfhefqe stigaafltq
       61 tvclddttvk feiwdtagqe ryhslapmyy rgaqaaivvy ditneesfar aknwvkelqr
      121 qaspnivial agnkadlank ravdfqeaqa yaddnsllfm etsaktsmnv neifmaiakk
      181 lpknepqnag assargrgvd lteptqppks qccsn
//
LOCUS       XP_041322458             215 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-5A [Pyrgilauda ruficollis].
ACCESSION   XP_041322458
VERSION     XP_041322458.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466524.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="ras-related protein Rab-5A"
                     /calculated_mol_wt=23381
     Region          20..182
                     /region_name="Rab5_related"
                     /note="Rab-related GTPase family includes Rab5 and Rab22;
                     regulates early endosome fusion; cd01860"
                     /db_xref="CDD:206653"
     Site            20..22
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206653"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206653"
     Site            order(29..35,45..46,51..52,78,133..134,136,163..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206653"
     Site            order(35..46,50..51)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206653"
     Site            order(45,50..58)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206653"
     Site            order(50,54..61,68,70)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            52
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206653"
     Site            order(53..54,56,74..75,82,84,86..88)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206653"
     Site            53..57
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206653"
     Site            order(55..57,59,81,88..89)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206653"
     Site            70..74
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206653"
     Site            75..78
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206653"
     Site            order(78,80..90)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206653"
     Site            81..86
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206653"
     Site            89..90
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206653"
     Site            98..103
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206653"
     Site            125..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206653"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206653"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206653"
     Site            179..181
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206653"
     CDS             1..215
                     /gene="RAB5A"
                     /coded_by="XM_041466524.1:411..1058"
                     /db_xref="GeneID:121353028"
ORIGIN      
        1 manrgatrpn gpnagnkicq fklvllgesa vgksslvlrf vkgqfhefqe stigaafltq
       61 tvclddttvk feiwdtagqe ryhslapmyy rgaqaaivvy ditneesfar aknwvkelqr
      121 qaspnivial agnkadlank ravdfqeaqa yaddnsllfm etsaktsmnv neifmaiakk
      181 lpknepqnag assargrgvd lteptqppks qccsn
//
LOCUS       XP_041322459             777 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor Sp4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322459
VERSION     XP_041322459.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466525.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..777
                     /product="transcription factor Sp4"
                     /calculated_mol_wt=80934
     Region          35..641
                     /region_name="SP4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Protein (SP) 4; cd22536"
                     /db_xref="CDD:411773"
     Region          640..664
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          642..664
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(649,651,653,655..656,659..660,663,679,681,685..686,
                     689..690,693,707,709,711,713..714,717..718,721)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          656..683
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          672..694
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          686..709
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          700..722
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          702..722
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..777
                     /gene="SP4"
                     /coded_by="XM_041466525.1:425..2758"
                     /db_xref="GeneID:121353029"
ORIGIN      
        1 msdqkkeetm ptegekspea ennnnnnkkg ktggsqdsqp splallaatc skigtpgenq
       61 gtgqqqiiid pnqglvqlqn qpqqlelvtt qlagnawqlv aaapsaskdn nvaqqgssva
      121 ssaaspsssn ngstspsktk sgnsstttpg qfqviqvqnp sgsvqyqvip qiqttegqin
      181 psnatglqdi qgqiqlipag nnqailttan rtasgnviaq nlanqtvpvq irpgvsiplq
      241 lqtipgtqaq vvttlpinig gvtlalpvin nvatggssgq vgqstesgvs ngnqlastpv
      301 tsasgstmpe spsssstatt tastsltssd tlvssaetgq ytstagssse qateepqtta
      361 tdseaqsssq lqsnglqnvq dqsgslqqvq ivgqpilqqi qiqqpqqqii qaippqsfql
      421 qsgqtiqtiq qqplqnvqlq avsptqvlir aptltpsgqi swqtvqvqnl qslsnlqvqn
      481 aglpqqltit pvsssggtti aqiapvavag tpitlnaaql asvpnlqtvs vanlsaagvq
      541 vqgvpvtits vagqqqgqdg vkvqqatiap vtvavggian aaigavspdq itqvqlqqaq
      601 qasdqevqpg krlrrvacsc pncregegrg snepgkkkqh ichiegcgkv ygktshlrah
      661 lrwhtgerpf vcnwifcgkr ftrsdelqrh rrthtgekrf ecpecskrfm rsdhlskhvk
      721 thqnkkgggt alaivtsgel dssvtevlgs privtvaais qdsnpatpnv stnmeef
//
LOCUS       XP_041322460             194 aa            linear   VRT 06-MAY-2021
DEFINITION  von Willebrand factor D and EGF domain-containing protein-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322460
VERSION     XP_041322460.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466526.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="von Willebrand factor D and EGF
                     domain-containing protein-like"
                     /calculated_mol_wt=20123
     CDS             1..194
                     /gene="LOC121353030"
                     /coded_by="XM_041466526.1:95..679"
                     /db_xref="GeneID:121353030"
ORIGIN      
        1 marragrgpg lrlllglwlc alspgpaaac sprcrhgglc ladgsclcsk gyegercqha
       61 tcypkckngg eclrpgkcrc ppgyggrych kvsceggcqn ggecvsvngv vkclcasgwt
      121 gsrcqeaicp qgcrnngacv apgicscpag wvgrachlav cklpcqhggk ciapnvcrcr
      181 lpysgpqctk krke
//
LOCUS       XP_041322461             798 aa            linear   VRT 06-MAY-2021
DEFINITION  N-acetylneuraminate 9-O-acetyltransferase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322461
VERSION     XP_041322461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..798
                     /product="N-acetylneuraminate 9-O-acetyltransferase
                     isoform X1"
                     /calculated_mol_wt=91600
     Region          295..777
                     /region_name="Cas1_AcylT"
                     /note="10 TM Acyl Transferase domain found in Cas1p;
                     pfam07779"
                     /db_xref="CDD:462263"
     CDS             1..798
                     /gene="CASD1"
                     /coded_by="XM_041466527.1:180..2576"
                     /db_xref="GeneID:121353031"
ORIGIN      
        1 maalaytggk reinyyfsvr sakalalgav llltachaas rryrggdtce yllssgrflg
       61 ekvwqphscm mhkyknseak nclidkhvvf igdsrirqlf ysfiklinpq vkeegikhgn
      121 ipfedksasi kvdflwypev ngsmrqriks wtegsvakph iivvgaatws ikihngsnea
      181 laqykinits iaplleklai ssdvywvlqd pvyedmlses rkmitnekid ayneaavril
      241 nsssrnskak vkvfsvskli aqetimksad glhlpessrd tnamilmnvy cnkimkpidg
      301 sccqpqpplt liqkiafcff tlsifgylii tlihrnnyrk nksctdlesg eekkpaistp
      361 nvstlemllh cfcklglimt yfylcdranl fmkenkfyth ssffipivyi lvlgvfyten
      421 tketkvlnre qtdewkgwmq lviliyhisg astflpvymh irvlvaaylf qtgyghfsyf
      481 wlkgdfgvyr vcqvlfrlnf lvvvlcivmd rpyqfyyfvp lvtvwfmviy atlavwpqiv
      541 qkkangnclw hfglllklic lltciyflsy sqgafekifs fwplskcfel ngnvyewwfr
      601 wkldryvvfh gmlfafiyla lqkqqmiseg kgdplfsnrv snvllfisiv sfltysiwas
      661 scknktecne lhpsvsvvqi lafilirnip gyvrsvyssf fawfgkisle lficqyhiwl
      721 aadtkgilvl ipgypmfnvl vstfifvcva heisqitndl aqivvpkdns tllkrllciv
      781 gffcglhffs amqdqsrh
//
LOCUS       XP_041322462             689 aa            linear   VRT 06-MAY-2021
DEFINITION  N-acetylneuraminate 9-O-acetyltransferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322462
VERSION     XP_041322462.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466528.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..689
                     /product="N-acetylneuraminate 9-O-acetyltransferase
                     isoform X2"
                     /calculated_mol_wt=79224
     Region          295..685
                     /region_name="Cas1_AcylT"
                     /note="10 TM Acyl Transferase domain found in Cas1p;
                     pfam07779"
                     /db_xref="CDD:462263"
     CDS             1..689
                     /gene="CASD1"
                     /coded_by="XM_041466528.1:181..2250"
                     /db_xref="GeneID:121353031"
ORIGIN      
        1 maalaytggk reinyyfsvr sakalalgav llltachaas rryrggdtce yllssgrflg
       61 ekvwqphscm mhkyknseak nclidkhvvf igdsrirqlf ysfiklinpq vkeegikhgn
      121 ipfedksasi kvdflwypev ngsmrqriks wtegsvakph iivvgaatws ikihngsnea
      181 laqykinits iaplleklai ssdvywvlqd pvyedmlses rkmitnekid ayneaavril
      241 nsssrnskak vkvfsvskli aqetimksad glhlpessrd tnamilmnvy cnkimkpidg
      301 sccqpqpplt liqkiafcff tlsifgylii tlihrnnyrk nksctdlesg eekkpaistp
      361 nvstlemllh cfcklglimt yfylcdranl fmkenkfyth ssffipivyi lvlgvfyten
      421 tketkvlnre qtdewkgwmq lviliyhisg astflpvymh irvlvaaylf qtgyghfsyf
      481 wlkgdfgvyr vcqvlfrlnf lvvvlcivmd rpyqfyyfvp lvtvwfmviy atlavwpqiv
      541 qkkangnclw hfglllklic lltciyflsy sqgafekifs fwplskcfel ngnvyewwfr
      601 wkldryvvfh gmlfafiyla lqkqqmiseg kgdplfsnrv snvllfisiv sfltysiwas
      661 scknktecne lhpsvsvvqe hswicpicv
//
LOCUS       XP_041322463              97 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-neuropeptide Y [Pyrgilauda ruficollis].
ACCESSION   XP_041322463
VERSION     XP_041322463.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466529.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..97
                     /product="pro-neuropeptide Y"
                     /calculated_mol_wt=10905
     Region          29..64
                     /region_name="PAH"
                     /note="Pancreatic hormones / neuropeptide F / peptide YY
                     family; smart00309"
                     /db_xref="CDD:197643"
     Site            order(45,49,52,56,58..60)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238072"
     Site            order(48,52,55,59..61,63..64)
                     /site_type="active"
                     /note="receptor binding site [active]"
                     /db_xref="CDD:238072"
     CDS             1..97
                     /gene="NPY"
                     /coded_by="XM_041466529.1:104..397"
                     /db_xref="GeneID:121353032"
ORIGIN      
        1 mqgtvrlwvs vltfalsllv clgtlaeayp skpdspgeda paedmaryys alrhyinlit
       61 rqrygkrssp dtlisdlllr esteniprsr fedpsmw
//
LOCUS       XP_041322466             727 aa            linear   VRT 06-MAY-2021
DEFINITION  engulfment and cell motility protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322466
VERSION     XP_041322466.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466532.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..727
                     /product="engulfment and cell motility protein 1 isoform
                     X1"
                     /calculated_mol_wt=83644
     Region          20..>105
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          115..280
                     /region_name="ELMO_ARM"
                     /note="ELMO, armadillo-like helical domain; pfam11841"
                     /db_xref="CDD:463369"
     Region          303..481
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     Region          546..675
                     /region_name="PH_ELMO1_CED-12"
                     /note="Engulfment and cell motility protein 1 pleckstrin
                     homology (PH) domain; cd13359"
                     /db_xref="CDD:270166"
     CDS             1..727
                     /gene="ELMO1"
                     /coded_by="XM_041466532.1:650..2833"
                     /db_xref="GeneID:121353033"
ORIGIN      
        1 mpppadivkv aiewpgafpk lmeidqkkpl ssiikevcdg wslanhdqfa lqhadssnfy
       61 iteknrneik ngailrltts paqnaqqlhe riqsssmdak lealkdlany srdvtfaqef
      121 inldgisllt qmvesgtery qklqkimkpc fgdmlsftlt afvelmdhgi vswdtfsvaf
      181 ikkiasyvnk fasdisilqr slailesmvl nshdlyqkva qeitigqlip hlqgtdqeiq
      241 tytiavinal flkapddkrq emanilaqkq lrsiilthvi raqrainnem ahqlyvlqvl
      301 tfnlledrmm tkmdpqdqaq rdiifelrri afdaesepnn ssgsmekrks mytrdykklg
      361 finhvnpamd ftqtppgmla ldnmlyfakh hqdayirivl enssredkhe cpfgrssiel
      421 tkmlceilkv gelpsetcnd fhpmffthdr sfeeffcici qllnktwkem ratsedfnkv
      481 mqvvkeqimr alttkpssld qfksklqnls yteilkirqs ermnqedfqs rpilelkeki
      541 qpeilelikq qrlnrlvegt cfrklnsrrr qdkfwycrls pnhkvlhygd leespqgevp
      601 hdslqdklpv adikavvtgk dcphmkekga lkqnkevlel afsilydssg qlnfiapdkh
      661 eycvwtdgln allgkdmlsd ltrndldtll smeiklrlld leniqipdap ppipkepsny
      721 dfvydcn
//
LOCUS       XP_041322467             727 aa            linear   VRT 06-MAY-2021
DEFINITION  engulfment and cell motility protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322467
VERSION     XP_041322467.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466533.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..727
                     /product="engulfment and cell motility protein 1 isoform
                     X1"
                     /calculated_mol_wt=83644
     Region          20..>105
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          115..280
                     /region_name="ELMO_ARM"
                     /note="ELMO, armadillo-like helical domain; pfam11841"
                     /db_xref="CDD:463369"
     Region          303..481
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     Region          546..675
                     /region_name="PH_ELMO1_CED-12"
                     /note="Engulfment and cell motility protein 1 pleckstrin
                     homology (PH) domain; cd13359"
                     /db_xref="CDD:270166"
     CDS             1..727
                     /gene="ELMO1"
                     /coded_by="XM_041466533.1:520..2703"
                     /db_xref="GeneID:121353033"
ORIGIN      
        1 mpppadivkv aiewpgafpk lmeidqkkpl ssiikevcdg wslanhdqfa lqhadssnfy
       61 iteknrneik ngailrltts paqnaqqlhe riqsssmdak lealkdlany srdvtfaqef
      121 inldgisllt qmvesgtery qklqkimkpc fgdmlsftlt afvelmdhgi vswdtfsvaf
      181 ikkiasyvnk fasdisilqr slailesmvl nshdlyqkva qeitigqlip hlqgtdqeiq
      241 tytiavinal flkapddkrq emanilaqkq lrsiilthvi raqrainnem ahqlyvlqvl
      301 tfnlledrmm tkmdpqdqaq rdiifelrri afdaesepnn ssgsmekrks mytrdykklg
      361 finhvnpamd ftqtppgmla ldnmlyfakh hqdayirivl enssredkhe cpfgrssiel
      421 tkmlceilkv gelpsetcnd fhpmffthdr sfeeffcici qllnktwkem ratsedfnkv
      481 mqvvkeqimr alttkpssld qfksklqnls yteilkirqs ermnqedfqs rpilelkeki
      541 qpeilelikq qrlnrlvegt cfrklnsrrr qdkfwycrls pnhkvlhygd leespqgevp
      601 hdslqdklpv adikavvtgk dcphmkekga lkqnkevlel afsilydssg qlnfiapdkh
      661 eycvwtdgln allgkdmlsd ltrndldtll smeiklrlld leniqipdap ppipkepsny
      721 dfvydcn
//
LOCUS       XP_041322468             718 aa            linear   VRT 06-MAY-2021
DEFINITION  engulfment and cell motility protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322468
VERSION     XP_041322468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466534.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..718
                     /product="engulfment and cell motility protein 1 isoform
                     X2"
                     /calculated_mol_wt=82712
     Region          106..271
                     /region_name="ELMO_ARM"
                     /note="ELMO, armadillo-like helical domain; pfam11841"
                     /db_xref="CDD:463369"
     Region          294..472
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     Region          537..666
                     /region_name="PH_ELMO1_CED-12"
                     /note="Engulfment and cell motility protein 1 pleckstrin
                     homology (PH) domain; cd13359"
                     /db_xref="CDD:270166"
     CDS             1..718
                     /gene="ELMO1"
                     /coded_by="XM_041466534.1:45..2201"
                     /db_xref="GeneID:121353033"
ORIGIN      
        1 msvaadgrla qrwmnqkkkp lssiikevcd gwslanhdqf alqhadssnf yiteknrnei
       61 kngailrltt spaqnaqqlh eriqsssmda klealkdlan ysrdvtfaqe finldgisll
      121 tqmvesgter yqklqkimkp cfgdmlsftl tafvelmdhg ivswdtfsva fikkiasyvn
      181 kfasdisilq rslailesmv lnshdlyqkv aqeitigqli phlqgtdqei qtytiavina
      241 lflkapddkr qemanilaqk qlrsiilthv iraqrainne mahqlyvlqv ltfnlledrm
      301 mtkmdpqdqa qrdiifelrr iafdaesepn nssgsmekrk smytrdykkl gfinhvnpam
      361 dftqtppgml aldnmlyfak hhqdayiriv lenssredkh ecpfgrssie ltkmlceilk
      421 vgelpsetcn dfhpmffthd rsfeeffcic iqllnktwke mratsedfnk vmqvvkeqim
      481 ralttkpssl dqfksklqnl syteilkirq sermnqedfq srpilelkek iqpeilelik
      541 qqrlnrlveg tcfrklnsrr rqdkfwycrl spnhkvlhyg dleespqgev phdslqdklp
      601 vadikavvtg kdcphmkekg alkqnkevle lafsilydss gqlnfiapdk heycvwtdgl
      661 nallgkdmls dltrndldtl lsmeiklrll dleniqipda pppipkepsn ydfvydcn
//
LOCUS       XP_041322469             631 aa            linear   VRT 06-MAY-2021
DEFINITION  engulfment and cell motility protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322469
VERSION     XP_041322469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="engulfment and cell motility protein 1 isoform
                     X3"
                     /calculated_mol_wt=72906
     Region          19..184
                     /region_name="ELMO_ARM"
                     /note="ELMO, armadillo-like helical domain; pfam11841"
                     /db_xref="CDD:463369"
     Region          207..385
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     Region          450..579
                     /region_name="PH_ELMO1_CED-12"
                     /note="Engulfment and cell motility protein 1 pleckstrin
                     homology (PH) domain; cd13359"
                     /db_xref="CDD:270166"
     CDS             1..631
                     /gene="ELMO1"
                     /coded_by="XM_041466535.1:942..2837"
                     /db_xref="GeneID:121353033"
ORIGIN      
        1 mdaklealkd lanysrdvtf aqefinldgi slltqmvesg teryqklqki mkpcfgdmls
       61 ftltafvelm dhgivswdtf svafikkias yvnkfasdis ilqrslaile smvlnshdly
      121 qkvaqeitig qliphlqgtd qeiqtytiav inalflkapd dkrqemanil aqkqlrsiil
      181 thviraqrai nnemahqlyv lqvltfnlle drmmtkmdpq dqaqrdiife lrriafdaes
      241 epnnssgsme krksmytrdy kklgfinhvn pamdftqtpp gmlaldnmly fakhhqdayi
      301 rivlenssre dkhecpfgrs sieltkmlce ilkvgelpse tcndfhpmff thdrsfeeff
      361 ciciqllnkt wkemratsed fnkvmqvvke qimralttkp ssldqfkskl qnlsyteilk
      421 irqsermnqe dfqsrpilel kekiqpeile likqqrlnrl vegtcfrkln srrrqdkfwy
      481 crlspnhkvl hygdleespq gevphdslqd klpvadikav vtgkdcphmk ekgalkqnke
      541 vlelafsily dssgqlnfia pdkheycvwt dglnallgkd mlsdltrndl dtllsmeikl
      601 rlldleniqi pdapppipke psnydfvydc n
//
LOCUS       XP_041322470             631 aa            linear   VRT 06-MAY-2021
DEFINITION  engulfment and cell motility protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322470
VERSION     XP_041322470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="engulfment and cell motility protein 1 isoform
                     X3"
                     /calculated_mol_wt=72906
     Region          19..184
                     /region_name="ELMO_ARM"
                     /note="ELMO, armadillo-like helical domain; pfam11841"
                     /db_xref="CDD:463369"
     Region          207..385
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     Region          450..579
                     /region_name="PH_ELMO1_CED-12"
                     /note="Engulfment and cell motility protein 1 pleckstrin
                     homology (PH) domain; cd13359"
                     /db_xref="CDD:270166"
     CDS             1..631
                     /gene="ELMO1"
                     /coded_by="XM_041466536.1:869..2764"
                     /db_xref="GeneID:121353033"
ORIGIN      
        1 mdaklealkd lanysrdvtf aqefinldgi slltqmvesg teryqklqki mkpcfgdmls
       61 ftltafvelm dhgivswdtf svafikkias yvnkfasdis ilqrslaile smvlnshdly
      121 qkvaqeitig qliphlqgtd qeiqtytiav inalflkapd dkrqemanil aqkqlrsiil
      181 thviraqrai nnemahqlyv lqvltfnlle drmmtkmdpq dqaqrdiife lrriafdaes
      241 epnnssgsme krksmytrdy kklgfinhvn pamdftqtpp gmlaldnmly fakhhqdayi
      301 rivlenssre dkhecpfgrs sieltkmlce ilkvgelpse tcndfhpmff thdrsfeeff
      361 ciciqllnkt wkemratsed fnkvmqvvke qimralttkp ssldqfkskl qnlsyteilk
      421 irqsermnqe dfqsrpilel kekiqpeile likqqrlnrl vegtcfrkln srrrqdkfwy
      481 crlspnhkvl hygdleespq gevphdslqd klpvadikav vtgkdcphmk ekgalkqnke
      541 vlelafsily dssgqlnfia pdkheycvwt dglnallgkd mlsdltrndl dtllsmeikl
      601 rlldleniqi pdapppipke psnydfvydc n
//
LOCUS       XP_041322471             631 aa            linear   VRT 06-MAY-2021
DEFINITION  engulfment and cell motility protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322471
VERSION     XP_041322471.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466537.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="engulfment and cell motility protein 1 isoform
                     X3"
                     /calculated_mol_wt=72906
     Region          19..184
                     /region_name="ELMO_ARM"
                     /note="ELMO, armadillo-like helical domain; pfam11841"
                     /db_xref="CDD:463369"
     Region          207..385
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     Region          450..579
                     /region_name="PH_ELMO1_CED-12"
                     /note="Engulfment and cell motility protein 1 pleckstrin
                     homology (PH) domain; cd13359"
                     /db_xref="CDD:270166"
     CDS             1..631
                     /gene="ELMO1"
                     /coded_by="XM_041466537.1:229..2124"
                     /db_xref="GeneID:121353033"
ORIGIN      
        1 mdaklealkd lanysrdvtf aqefinldgi slltqmvesg teryqklqki mkpcfgdmls
       61 ftltafvelm dhgivswdtf svafikkias yvnkfasdis ilqrslaile smvlnshdly
      121 qkvaqeitig qliphlqgtd qeiqtytiav inalflkapd dkrqemanil aqkqlrsiil
      181 thviraqrai nnemahqlyv lqvltfnlle drmmtkmdpq dqaqrdiife lrriafdaes
      241 epnnssgsme krksmytrdy kklgfinhvn pamdftqtpp gmlaldnmly fakhhqdayi
      301 rivlenssre dkhecpfgrs sieltkmlce ilkvgelpse tcndfhpmff thdrsfeeff
      361 ciciqllnkt wkemratsed fnkvmqvvke qimralttkp ssldqfkskl qnlsyteilk
      421 irqsermnqe dfqsrpilel kekiqpeile likqqrlnrl vegtcfrkln srrrqdkfwy
      481 crlspnhkvl hygdleespq gevphdslqd klpvadikav vtgkdcphmk ekgalkqnke
      541 vlelafsily dssgqlnfia pdkheycvwt dglnallgkd mlsdltrndl dtllsmeikl
      601 rlldleniqi pdapppipke psnydfvydc n
//
LOCUS       XP_041322472             284 aa            linear   VRT 06-MAY-2021
DEFINITION  engulfment and cell motility protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322472
VERSION     XP_041322472.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466538.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="engulfment and cell motility protein 1 isoform
                     X4"
                     /calculated_mol_wt=33111
     Region          <1..38
                     /region_name="ELMO_CED12"
                     /note="ELMO/CED-12 family; pfam04727"
                     /db_xref="CDD:461411"
     Region          103..232
                     /region_name="PH_ELMO1_CED-12"
                     /note="Engulfment and cell motility protein 1 pleckstrin
                     homology (PH) domain; cd13359"
                     /db_xref="CDD:270166"
     CDS             1..284
                     /gene="ELMO1"
                     /coded_by="XM_041466538.1:75..929"
                     /db_xref="GeneID:121353033"
ORIGIN      
        1 mffthdrsfe effciciqll nktwkemrat sedfnkvmqv vkeqimralt tkpssldqfk
       61 sklqnlsyte ilkirqserm nqedfqsrpi lelkekiqpe ilelikqqrl nrlvegtcfr
      121 klnsrrrqdk fwycrlspnh kvlhygdlee spqgevphds lqdklpvadi kavvtgkdcp
      181 hmkekgalkq nkevlelafs ilydssgqln fiapdkheyc vwtdglnall gkdmlsdltr
      241 ndldtllsme iklrlldlen iqipdapppi pkepsnydfv ydcn
//
LOCUS       XP_041322473            1316 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-binding cassette sub-family B member 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322473
VERSION     XP_041322473.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466539.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1316
                     /product="ATP-binding cassette sub-family B member 5"
                     /calculated_mol_wt=144750
     Region          73..1310
                     /region_name="PTZ00265"
                     /note="multidrug resistance protein (mdr1); Provisional"
                     /db_xref="CDD:240339"
     CDS             1..1316
                     /gene="ABCB5"
                     /coded_by="XM_041466539.1:99..4049"
                     /db_xref="GeneID:121353034"
ORIGIN      
        1 mkdysanpte qslsdpesgs kgcddpsfqh eehveqidql kpkkemkede kpekrmvgil
       61 elfryadgvd vllmivglva aaangtgmpl miiifgemtn sfvlsgvqsn dtsvnnsnsp
      121 shpgvdiege mtkfayyyvg igfavlilsi iqvwtflvaa trqtarirqk fffavlhqem
      181 awfdttqigt lntrltddin tirggigdki siflqffstf vsgliigfiy gwkltlvvms
      241 vspllaasaa iwssllaslt akelsayaka gavaeeilta irtvvafngq qkalekydan
      301 lemakrvgmk ksittntclg lsqffifgsy alafwygtkl taedphydig rvlivffsvt
      361 vgafslgqaa pnlesmanar gaayevykii nkkrlidsss kegykpeklv geiefrnihf
      421 sypsrpdvki lkglnlkvqt gktialvgas gcgksttvql lqrfydpdqg eitldgrdir
      481 tlntkwlren igivsqepvl fattiaenir ygredisdae ieqaakeana fdfisrlpdk
      541 fntmvgerga qlsggqkqri aiaralarnp killldeats aldtqsesiv qaaldkarag
      601 rttiviahrl stirtadtia gfekgvvveq gthselmlqk gvyyslvmqq gctsdvqddg
      661 tsedsegtgs eeyeeninpv eeltlqnhfe tsvisgkgsi rrrssryksk rsssknpfgk
      721 tkkqkeveee nlpavpylki lalnkpewfy vllgviaaav igavhpafav ifgkiigafq
      781 etdpekrskn tvllsliflv lgviilaayi iqgfmfgksg etltmrlrsl sfrallqqei
      841 gwyddqknav gvlltrlatd asqvkgatgs rlalmtmtvf tlvtaiiiaf vygwqltlli
      901 lacipfivga navsassmsg haaedqkale eagristesv enirtvaslt keeafyeryv
      961 sclndtyrks mrkapfygft ygiaqcseyf inaavfrfga wliandlsnf envfivfssv
     1021 ifaamnvgqs ssmapdygka rmsaqrifql ldrkplidsy seqgeklshf egniefrnvh
     1081 fvyptrpevq vlqglnvkvk kgqtlalvgs sgcgkstsiq llerfydpve gqvladgfdt
     1141 kslhlqwlrs rlglvsqepv lfdcsiaeni qygdnsrvvs qeeieeaaka anihafiekl
     1201 pekyntrvge kgtqlsggqk qriaiaralv rnpavlllde atsaldtese kivqkaldna
     1261 rqgrtcivia hrlstvqtad iivviqngrv veqgthsqll akeghyyalv naqvsn
//
LOCUS       XP_041322475             448 aa            linear   VRT 06-MAY-2021
DEFINITION  RUN domain-containing protein 3B [Pyrgilauda ruficollis].
ACCESSION   XP_041322475
VERSION     XP_041322475.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466541.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="RUN domain-containing protein 3B"
                     /calculated_mol_wt=50113
     Region          29..179
                     /region_name="RUN_RUNDC3B"
                     /note="RUN domain found in RUN domain-containing protein
                     3B (RUNDC3B) and similar proteins; cd17700"
                     /db_xref="CDD:439062"
     CDS             1..448
                     /gene="RUNDC3B"
                     /coded_by="XM_041466541.1:262..1608"
                     /db_xref="GeneID:121353035"
ORIGIN      
        1 maslglggln vsarrksvps rnaaverrnl itvcrfsvkt lidrscfeti ddtspefnnf
       61 aaileqilsh rlkgqitwfg yesprsfwdy irvacrkvsh ncicsienme nvgssrakgr
      121 awirvalmek hlseyistal rdfkttrrfy edgaivlgee anmlagmllg lnaidfsfcl
      181 kgegldgsyp avidytpylk ftqssdsiss deeelrtlgs sgsegstpen igppfitden
      241 swynkckrve qkyrlaleqk gyleelvrlr enqlsesvsq nklllqried mdlahkmeke
      301 qleyiivelq dqltvlknnd lrsrqeltth ltnqwpspga ldvnavaldt llyrkhnqqw
      361 deksfqsldq lsaevslsqs sldpghsqdg kqdginllne gkedtpsllg lcgsltsvas
      421 yksltslkss eylaspttem tspgltps
//
LOCUS       XP_041322476             115 aa            linear   VRT 06-MAY-2021
DEFINITION  protachykinin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322476
VERSION     XP_041322476.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466542.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..115
                     /product="protachykinin-1 isoform X1"
                     /calculated_mol_wt=12883
     CDS             1..115
                     /gene="TAC1"
                     /coded_by="XM_041466542.1:55..402"
                     /db_xref="GeneID:121353036"
ORIGIN      
        1 mrlplafavl llassqalge emgasddlsy wsdwsdgeqa keelplpleh flqrmarrpr
       61 pqqffglmgk rdagygqish krhktdsfvg lmgkrslnsg ssegsiaqny errrk
//
LOCUS       XP_041322477              97 aa            linear   VRT 06-MAY-2021
DEFINITION  protachykinin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322477
VERSION     XP_041322477.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466543.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..97
                     /product="protachykinin-1 isoform X2"
                     /calculated_mol_wt=10966
     CDS             1..97
                     /gene="TAC1"
                     /coded_by="XM_041466543.1:51..344"
                     /db_xref="GeneID:121353036"
ORIGIN      
        1 mrlplafavl llassqalge emgasddlsy wsdwsdgeqa keelplpleh flqrmarrpr
       61 pqqffglmgk rdagygqish krssegsiaq nyerrrk
//
LOCUS       XP_041322478             456 aa            linear   VRT 06-MAY-2021
DEFINITION  lanC-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322478
VERSION     XP_041322478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="lanC-like protein 2"
                     /calculated_mol_wt=51498
     Region          102..439
                     /region_name="euk_LANCL"
                     /note="Eukaryotic Lanthionine synthetase C-like protein;
                     cd04794"
                     /db_xref="CDD:271202"
     CDS             1..456
                     /gene="LANCL2"
                     /coded_by="XM_041466544.1:5..1375"
                     /db_xref="GeneID:121353037"
ORIGIN      
        1 mgesmskrlk lqlggeaeme eraftnpypd yqpqgavaap saadahrdra lqppaeeesl
       61 pfgadgkvna rfskriqtki kdllqqmeeg lktadphdcs aytgwtgial lylqlyrvtk
      121 nqshlqrsld yvkrilrnln grrvtflcgd agplavgavv yhklknsses qecvakllql
      181 qrtvistdse lpdellygra gylyallyln teigpdtvpq svikevidai iesgknfske
      241 erktdrcpll yqwhrkqyvg aahgvagiyy mlmqpianvd qetltelvkp sidyvrhkkf
      301 rsgnypssls netdrlvhwc hgapgvihml mqayktfked kylkdamdcs dviwqrgllr
      361 kgygichgta gngysflsly nltqdrkyly rackfaewcl eygahgcrip drpyslfegm
      421 agaihflsdi svpetsqfpa felrpqrren kveqdg
//
LOCUS       XP_041322479             452 aa            linear   VRT 06-MAY-2021
DEFINITION  acetylcholinesterase collagenic tail peptide [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322479
VERSION     XP_041322479.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466545.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..452
                     /product="acetylcholinesterase collagenic tail peptide"
                     /calculated_mol_wt=48194
     Region          <104..>287
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          369..>394
                     /region_name="myxo_disulf_rpt"
                     /note="Myxococcus cysteine-rich repeat; TIGR02232"
                     /db_xref="CDD:200169"
     CDS             1..452
                     /gene="COLQ"
                     /coded_by="XM_041466545.1:1..1359"
                     /db_xref="GeneID:121353038"
ORIGIN      
        1 mlllsplvrg sylllffcfa lsqtayadnv fslsadlpcl eqkkehcrac cllgpppppl
       61 fpppyfrhsw stkldmeelc helqiiqass lselhcsagp pgpqgpqgip gimgpkgekg
      121 eigrpgrkgr pgppgvpgmp gpvgwpgpmg qkgekgelgv mglpgtrgpm gskgfpgtrg
      181 ekgsrgdrgd kgvkgdpgei gfpgmlgqkg emgpkgqsgv pghrgpigrp gkrgkqglkg
      241 digpagvmgp pgrpgpvgqp gppgpsglgq faigpkgerg lpgppgrclc rtpqhmsnps
      301 yeqsvfghsy pkvpaifvvn nqeeldrlnt enalafrrdq rslyfkdtfg wlpvqltply
      361 pvdyrfeerg tcgdgivqdg eecddgnavv tddcircrra ycgdgykheg vedcdgmdfg
      421 yltcrtylpg sygklrctsy cyidstqcry ft
//
LOCUS       XP_041322480             271 aa            linear   VRT 06-MAY-2021
DEFINITION  neurexophilin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322480
VERSION     XP_041322480.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466546.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="neurexophilin-1"
                     /calculated_mol_wt=30965
     Region          63..271
                     /region_name="Neurexophilin"
                     /note="pfam06312"
                     /db_xref="CDD:428882"
     CDS             1..271
                     /gene="NXPH1"
                     /coded_by="XM_041466546.1:286..1101"
                     /db_xref="GeneID:121353039"
ORIGIN      
        1 mqavywyavl llqptlylvt canltnggkt ellksgssks tlkhiwtess kdlsisrlls
       61 qtfrgkendt dldlrydape tyseqdlwdw lrnstdlqep rprakrrpiv ktgkfkkmfg
      121 wgdfhsnikt vklnllitgk ivdhgngtfs vyfrhnstgq gnvsvslvpp tkivefdlaq
      181 qtvidakdsk sfncrieyek vdkatkntlc nydpsktcyq eqtqshvswl cskpfkvici
      241 yisfystdyk lvqkvcpdyn yhsdtpyfps g
//
LOCUS       XP_041322481             130 aa            linear   VRT 06-MAY-2021
DEFINITION  cholecystokinin [Pyrgilauda ruficollis].
ACCESSION   XP_041322481
VERSION     XP_041322481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..130
                     /product="cholecystokinin"
                     /calculated_mol_wt=14229
     Region          3..130
                     /region_name="Gastrin"
                     /note="Gastrin/cholecystokinin family; pfam00918"
                     /db_xref="CDD:459996"
     CDS             1..130
                     /gene="CCK"
                     /coded_by="XM_041466547.1:72..464"
                     /db_xref="GeneID:121353040"
ORIGIN      
        1 mysglcicvf lavlsvsslg qqtlgshdgn plpaeleqsl aehqrhsrap ssagplkslq
       61 rldvssdqra nigallakyl qqarkgstgr fsvmgnrvqs idpthrindr dymgwmdfgr
      121 rsaeeyeyss
//
LOCUS       XP_041322483             469 aa            linear   VRT 06-MAY-2021
DEFINITION  calcitonin receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041322483
VERSION     XP_041322483.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466549.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..469
                     /product="calcitonin receptor"
                     /calculated_mol_wt=54377
     Region          68..136
                     /region_name="HRM"
                     /note="Hormone receptor domain; pfam02793"
                     /db_xref="CDD:397086"
     Region          144..417
                     /region_name="7tmB1_calcitonin_R"
                     /note="calcitonin receptor, member of the class B family
                     of seven-transmembrane G protein-coupled receptors;
                     cd15274"
                     /db_xref="CDD:341343"
     Region          146..171
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341343"
     Site            order(151,155,197,200..201,204,219,226,296..297,299,301,
                     355,358,372,376)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:341343"
     Site            order(179,242..243,246..248,251..253,322,325..326,
                     329..330,344,347,393,403,407,414,417)
                     /site_type="other"
                     /note="G protein interaction site [polypeptide binding]"
                     /db_xref="CDD:341343"
     Region          180..202
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341343"
     Region          219..246
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341343"
     Region          258..278
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341343"
     Region          293..322
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341343"
     Region          336..363
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341343"
     Region          369..394
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341343"
     CDS             1..469
                     /gene="CALCR"
                     /coded_by="XM_041466549.1:170..1579"
                     /db_xref="GeneID:121353041"
ORIGIN      
        1 mkkttqscfl liilltrivp slsstvnytd ptlepvvten svirqkiids qfkcyermnr
       61 appykkkglf cnrtwdgwlc wddtpagrlt aqncpdyfpd fdpterasky cdetgnwfrh
      121 pesnrtwsny tlcnsftsek lkmafilyym aivghalsit sllislaiff yfkslscqri
      181 tlhknlffsy vlnsmftiah liavvpnpgl vkrdpvsckv lqffhqymlg cnyfwmlceg
      241 iylhtlivva vfaeeqrlhw yyllgwgfpl vpatihavar aryfndncwm svdthllyiv
      301 hgpvmaallv nfffllnivr vlvtklrdth raesnmymka vratlilvpl lgiqfviipw
      361 rpenrlagei ydyimhilmh yqgllvatif cffngevqga lkrqwtqykt qwgqrrrehc
      421 strstsytat sitevpvyly hhdanneqln gryvedselv alksgdtsa
//
LOCUS       XP_041322484             785 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein SATB1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322484
VERSION     XP_041322484.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466550.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..785
                     /product="DNA-binding protein SATB1 isoform X1"
                     /calculated_mol_wt=87890
     Region          72..170
                     /region_name="ULD"
                     /note="Ubiquitin-like oligomerization domain of SATB;
                     pfam16534"
                     /db_xref="CDD:465165"
     Site            order(75,77,94..98,100,132,134,137..138,144..147,155..156,
                     159..161,163..164)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:211426"
     Region          176..247
                     /region_name="CUTL"
                     /note="CUT1-like DNA-binding domain of SATB; pfam16557"
                     /db_xref="CDD:435427"
     Region          372..444
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          497..567
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          666..723
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(667..671,673,691,697,710,712..713,716..717,719..721,
                     723..724)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(669,672,713,716..717,720)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..785
                     /gene="SATB1"
                     /coded_by="XM_041466550.1:1382..3739"
                     /db_xref="GeneID:121353042"
ORIGIN      
        1 mdhlneatqg kehsemsnnv sdpkgppaki arleqngspl grgrlgstgt kmqgvplkhs
       61 ghlmktnirk gsmlpvfcvv ehyenaieyd skeehaefvl vrkdmlfnql iemallslgy
      121 shssaaqakg liqvgkwnpv plsyvtdapd atvadmlqdv yhvvtlkiql hscpkledlp
      181 peqwshttvr nalkdllkdm nqsslakecp lsqsmissiv nstyyanvsa akcqefgrwy
      241 khfkkakdmm vemdslsels qqganhvnfg qqpvpgntae qppspvqlsh gsqpsvrtpl
      301 pnlhpglvst pispqlvnqq lvmaqllnqq yavnrllaqq slnqqylnhp ppvsrsmnkp
      361 leqqvstnte vsseiyqwvr delkragisq avfarvafnr tqgllseilr keedpktasq
      421 sllvnlramq nflqlpeaer driyqderer slnaasamgp aplistppsr ppqvktatia
      481 terngkpenn smninasiyd eiqqemkrak vsqalfakva atksqgwlce llrwkedpsp
      541 enrtlwenls mirrflslpq perdaiyeqe snavhhhgdr pshiihvpae qiqspspttl
      601 gkgehrgafl pglltagpwl gaapqqqqqq qqqqqqqqqq qpgprlpprq ptvaspaese
      661 denrqkprpr tkisvealgi lqsfiqdvgl ypdeeaiqtl saqldlpkyt iikffqnqry
      721 ylkhhgklkd nsglevdvae ykeeellkdl edsiqdknan tlfsvkleee lsvegntein
      781 aelkd
//
LOCUS       XP_041322485             785 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein SATB1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322485
VERSION     XP_041322485.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466551.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..785
                     /product="DNA-binding protein SATB1 isoform X1"
                     /calculated_mol_wt=87890
     Region          72..170
                     /region_name="ULD"
                     /note="Ubiquitin-like oligomerization domain of SATB;
                     pfam16534"
                     /db_xref="CDD:465165"
     Site            order(75,77,94..98,100,132,134,137..138,144..147,155..156,
                     159..161,163..164)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:211426"
     Region          176..247
                     /region_name="CUTL"
                     /note="CUT1-like DNA-binding domain of SATB; pfam16557"
                     /db_xref="CDD:435427"
     Region          372..444
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          497..567
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          666..723
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(667..671,673,691,697,710,712..713,716..717,719..721,
                     723..724)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(669,672,713,716..717,720)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..785
                     /gene="SATB1"
                     /coded_by="XM_041466551.1:1452..3809"
                     /db_xref="GeneID:121353042"
ORIGIN      
        1 mdhlneatqg kehsemsnnv sdpkgppaki arleqngspl grgrlgstgt kmqgvplkhs
       61 ghlmktnirk gsmlpvfcvv ehyenaieyd skeehaefvl vrkdmlfnql iemallslgy
      121 shssaaqakg liqvgkwnpv plsyvtdapd atvadmlqdv yhvvtlkiql hscpkledlp
      181 peqwshttvr nalkdllkdm nqsslakecp lsqsmissiv nstyyanvsa akcqefgrwy
      241 khfkkakdmm vemdslsels qqganhvnfg qqpvpgntae qppspvqlsh gsqpsvrtpl
      301 pnlhpglvst pispqlvnqq lvmaqllnqq yavnrllaqq slnqqylnhp ppvsrsmnkp
      361 leqqvstnte vsseiyqwvr delkragisq avfarvafnr tqgllseilr keedpktasq
      421 sllvnlramq nflqlpeaer driyqderer slnaasamgp aplistppsr ppqvktatia
      481 terngkpenn smninasiyd eiqqemkrak vsqalfakva atksqgwlce llrwkedpsp
      541 enrtlwenls mirrflslpq perdaiyeqe snavhhhgdr pshiihvpae qiqspspttl
      601 gkgehrgafl pglltagpwl gaapqqqqqq qqqqqqqqqq qpgprlpprq ptvaspaese
      661 denrqkprpr tkisvealgi lqsfiqdvgl ypdeeaiqtl saqldlpkyt iikffqnqry
      721 ylkhhgklkd nsglevdvae ykeeellkdl edsiqdknan tlfsvkleee lsvegntein
      781 aelkd
//
LOCUS       XP_041322486             785 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein SATB1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322486
VERSION     XP_041322486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..785
                     /product="DNA-binding protein SATB1 isoform X1"
                     /calculated_mol_wt=87890
     Region          72..170
                     /region_name="ULD"
                     /note="Ubiquitin-like oligomerization domain of SATB;
                     pfam16534"
                     /db_xref="CDD:465165"
     Site            order(75,77,94..98,100,132,134,137..138,144..147,155..156,
                     159..161,163..164)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:211426"
     Region          176..247
                     /region_name="CUTL"
                     /note="CUT1-like DNA-binding domain of SATB; pfam16557"
                     /db_xref="CDD:435427"
     Region          372..444
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          497..567
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          666..723
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(667..671,673,691,697,710,712..713,716..717,719..721,
                     723..724)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(669,672,713,716..717,720)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..785
                     /gene="SATB1"
                     /coded_by="XM_041466552.1:768..3125"
                     /db_xref="GeneID:121353042"
ORIGIN      
        1 mdhlneatqg kehsemsnnv sdpkgppaki arleqngspl grgrlgstgt kmqgvplkhs
       61 ghlmktnirk gsmlpvfcvv ehyenaieyd skeehaefvl vrkdmlfnql iemallslgy
      121 shssaaqakg liqvgkwnpv plsyvtdapd atvadmlqdv yhvvtlkiql hscpkledlp
      181 peqwshttvr nalkdllkdm nqsslakecp lsqsmissiv nstyyanvsa akcqefgrwy
      241 khfkkakdmm vemdslsels qqganhvnfg qqpvpgntae qppspvqlsh gsqpsvrtpl
      301 pnlhpglvst pispqlvnqq lvmaqllnqq yavnrllaqq slnqqylnhp ppvsrsmnkp
      361 leqqvstnte vsseiyqwvr delkragisq avfarvafnr tqgllseilr keedpktasq
      421 sllvnlramq nflqlpeaer driyqderer slnaasamgp aplistppsr ppqvktatia
      481 terngkpenn smninasiyd eiqqemkrak vsqalfakva atksqgwlce llrwkedpsp
      541 enrtlwenls mirrflslpq perdaiyeqe snavhhhgdr pshiihvpae qiqspspttl
      601 gkgehrgafl pglltagpwl gaapqqqqqq qqqqqqqqqq qpgprlpprq ptvaspaese
      661 denrqkprpr tkisvealgi lqsfiqdvgl ypdeeaiqtl saqldlpkyt iikffqnqry
      721 ylkhhgklkd nsglevdvae ykeeellkdl edsiqdknan tlfsvkleee lsvegntein
      781 aelkd
//
LOCUS       XP_041322487             753 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein SATB1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322487
VERSION     XP_041322487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="DNA-binding protein SATB1 isoform X2"
                     /calculated_mol_wt=84722
     Region          72..170
                     /region_name="ULD"
                     /note="Ubiquitin-like oligomerization domain of SATB;
                     pfam16534"
                     /db_xref="CDD:465165"
     Site            order(75,77,94..98,100,132,134,137..138,144..147,155..156,
                     159..161,163..164)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:211426"
     Region          176..247
                     /region_name="CUTL"
                     /note="CUT1-like DNA-binding domain of SATB; pfam16557"
                     /db_xref="CDD:435427"
     Region          372..444
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          497..567
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          634..691
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(635..639,641,659,665,678,680..681,684..685,687..689,
                     691..692)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(637,640,681,684..685,688)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..753
                     /gene="SATB1"
                     /coded_by="XM_041466553.1:1382..3643"
                     /db_xref="GeneID:121353042"
ORIGIN      
        1 mdhlneatqg kehsemsnnv sdpkgppaki arleqngspl grgrlgstgt kmqgvplkhs
       61 ghlmktnirk gsmlpvfcvv ehyenaieyd skeehaefvl vrkdmlfnql iemallslgy
      121 shssaaqakg liqvgkwnpv plsyvtdapd atvadmlqdv yhvvtlkiql hscpkledlp
      181 peqwshttvr nalkdllkdm nqsslakecp lsqsmissiv nstyyanvsa akcqefgrwy
      241 khfkkakdmm vemdslsels qqganhvnfg qqpvpgntae qppspvqlsh gsqpsvrtpl
      301 pnlhpglvst pispqlvnqq lvmaqllnqq yavnrllaqq slnqqylnhp ppvsrsmnkp
      361 leqqvstnte vsseiyqwvr delkragisq avfarvafnr tqgllseilr keedpktasq
      421 sllvnlramq nflqlpeaer driyqderer slnaasamgp aplistppsr ppqvktatia
      481 terngkpenn smninasiyd eiqqemkrak vsqalfakva atksqgwlce llrwkedpsp
      541 enrtlwenls mirrflslpq perdaiyeqe snavhhhgdr pshiihvpae qiqqqqqqqq
      601 qqqqqqqqqp gprlpprqpt vaspaesede nrqkprprtk isvealgilq sfiqdvglyp
      661 deeaiqtlsa qldlpkytii kffqnqryyl khhgklkdns glevdvaeyk eeellkdled
      721 siqdknantl fsvkleeels vegnteinae lkd
//
LOCUS       XP_041322488             752 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein SATB1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322488
VERSION     XP_041322488.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466554.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..752
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..752
                     /product="DNA-binding protein SATB1 isoform X3"
                     /calculated_mol_wt=84594
     Region          72..170
                     /region_name="ULD"
                     /note="Ubiquitin-like oligomerization domain of SATB;
                     pfam16534"
                     /db_xref="CDD:465165"
     Site            order(75,77,94..98,100,132,134,137..138,144..147,155..156,
                     159..161,163..164)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:211426"
     Region          176..247
                     /region_name="CUTL"
                     /note="CUT1-like DNA-binding domain of SATB; pfam16557"
                     /db_xref="CDD:435427"
     Region          372..444
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          497..567
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          633..690
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(634..638,640,658,664,677,679..680,683..684,686..688,
                     690..691)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(636,639,680,683..684,687)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..752
                     /gene="SATB1"
                     /coded_by="XM_041466554.1:1382..3640"
                     /db_xref="GeneID:121353042"
ORIGIN      
        1 mdhlneatqg kehsemsnnv sdpkgppaki arleqngspl grgrlgstgt kmqgvplkhs
       61 ghlmktnirk gsmlpvfcvv ehyenaieyd skeehaefvl vrkdmlfnql iemallslgy
      121 shssaaqakg liqvgkwnpv plsyvtdapd atvadmlqdv yhvvtlkiql hscpkledlp
      181 peqwshttvr nalkdllkdm nqsslakecp lsqsmissiv nstyyanvsa akcqefgrwy
      241 khfkkakdmm vemdslsels qqganhvnfg qqpvpgntae qppspvqlsh gsqpsvrtpl
      301 pnlhpglvst pispqlvnqq lvmaqllnqq yavnrllaqq slnqqylnhp ppvsrsmnkp
      361 leqqvstnte vsseiyqwvr delkragisq avfarvafnr tqgllseilr keedpktasq
      421 sllvnlramq nflqlpeaer driyqderer slnaasamgp aplistppsr ppqvktatia
      481 terngkpenn smninasiyd eiqqemkrak vsqalfakva atksqgwlce llrwkedpsp
      541 enrtlwenls mirrflslpq perdaiyeqe snavhhhgdr pshiihvpae qiqqqqqqqq
      601 qqqqqqqqpg prlpprqptv aspaeseden rqkprprtki svealgilqs fiqdvglypd
      661 eeaiqtlsaq ldlpkytiik ffqnqryylk hhgklkdnsg levdvaeyke eellkdleds
      721 iqdknantlf svkleeelsv egnteinael kd
//
LOCUS       XP_041322489             353 aa            linear   VRT 06-MAY-2021
DEFINITION  CX3C chemokine receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322489
VERSION     XP_041322489.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466555.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="CX3C chemokine receptor 1"
                     /calculated_mol_wt=39946
     Region          32..303
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          34..58
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320314"
     Region          66..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320314"
     Region          102..124
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320314"
     Region          147..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320314"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320314"
     Region          229..251
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320314"
     Region          271..296
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320314"
     CDS             1..353
                     /gene="CX3CR1"
                     /coded_by="XM_041466555.1:95..1156"
                     /db_xref="GeneID:121353043"
ORIGIN      
        1 mteayaetta eytydehafs cnktdiqefg kiflplfyiv vfalgltgnl mvvfaivkgn
       61 kksitdiyll nlaisdllfv islpfwasnt vrgwtlgtia ctavsslyyi gffggmffit
      121 visvdrylai vratyslksr tvrhgflvtc gvwaiavlvs vphfvfsqli endciavfpe
      181 kleniwpvfc nmelntvgff ipvciifycy cgiiktllsc knqkkaraik lilivvvvff
      241 lfwspynvli fldtlnhyel ftncnqiksl dyamhlteti afshcclnpl iyafagekfr
      301 kylyhvcmky cpflcfcgpc shyqvshsvs yaesvvnsni tqntsdqdas vfv
//
LOCUS       XP_041322490             353 aa            linear   VRT 06-MAY-2021
DEFINITION  CX3C chemokine receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322490
VERSION     XP_041322490.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466556.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="CX3C chemokine receptor 1"
                     /calculated_mol_wt=39946
     Region          32..303
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          34..58
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320314"
     Region          66..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320314"
     Region          102..124
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320314"
     Region          147..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320314"
     Region          188..211
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320314"
     Region          229..251
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320314"
     Region          271..296
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320314"
     CDS             1..353
                     /gene="CX3CR1"
                     /coded_by="XM_041466556.1:75..1136"
                     /db_xref="GeneID:121353043"
ORIGIN      
        1 mteayaetta eytydehafs cnktdiqefg kiflplfyiv vfalgltgnl mvvfaivkgn
       61 kksitdiyll nlaisdllfv islpfwasnt vrgwtlgtia ctavsslyyi gffggmffit
      121 visvdrylai vratyslksr tvrhgflvtc gvwaiavlvs vphfvfsqli endciavfpe
      181 kleniwpvfc nmelntvgff ipvciifycy cgiiktllsc knqkkaraik lilivvvvff
      241 lfwspynvli fldtlnhyel ftncnqiksl dyamhlteti afshcclnpl iyafagekfr
      301 kylyhvcmky cpflcfcgpc shyqvshsvs yaesvvnsni tqntsdqdas vfv
//
LOCUS       XP_041322491            1290 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisome biogenesis factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322491
VERSION     XP_041322491.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466557.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1290
                     /product="peroxisome biogenesis factor 1 isoform X1"
                     /calculated_mol_wt=142678
     Region          15..95
                     /region_name="PEX-2N"
                     /note="Peroxisome biogenesis factor 1, N-terminal;
                     pfam09263"
                     /db_xref="CDD:462730"
     Region          101..176
                     /region_name="PEX-1N"
                     /note="Peroxisome biogenesis factor 1, N-terminal;
                     pfam09262"
                     /db_xref="CDD:462729"
     Region          379..1066
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..1290
                     /gene="PEX1"
                     /coded_by="XM_041466557.1:69..3941"
                     /db_xref="GeneID:121353044"
ORIGIN      
        1 mwgcgdpgga aaaatvvlsg trdcflhlpp alasllrlqq gqavkvscgh qpvflswmet
       61 rhrgyqseni aeinrhlaek lgitdgeqvf lepcshvssc qqveveplta ddweilelha
      121 sslerhlldq irvvfpraif pvwveqhthv yirigtlvpp apygrlepct ellicpkthg
      181 peesitstla tesdillknf vknnmeqeet lkdpfakqpy lkpgvleqsk tdanvtfgsn
      241 vlpniwnfig nifsnaseqk qktscdnyem sifkdkllns ihmdsifrvc qsqppsvqnv
      301 sttheflksn avhvfpwnle yidldpnpvv sygkinells prqrhqeakq nlplekqnhl
      361 tstedknpsn snsgqasseg svvqivwngf edlksvieyg hdggalhvgr vwiadglrkk
      421 lhiemhstvr iksiesipki pvsltlqpkq nlhkdihedd vkcafsswlq dsttddhpwi
      481 mtstdcvhls vkegieefvl saahpvhiee nksedifils psllqktniq vvlhplsrka
      541 dddsqppmpd rdktlpyhkl sdlggldklg tslfehishs llgrplsqkl aanavglrsg
      601 gvlltggkgs gkstlgkaic keaftrldah vevidckalk gkrlvnirkh veeafleaaw
      661 rqpsvllmdd ldhivgvpst pehenspetv qsnrlayvlk dlmkeviamg slialiatsq
      721 sehslhpslv saqgthifqc fkcirspdqk qryemlysii krklnsdpkd fsdldlqcia
      781 ketegfvard ftmlvdraih tcasnpnasd ngdlnlstvd fqkalkdftp lalrnvnlhk
      841 pkdlvwdrig glkdvkqmlr dtimlpakyp elfaslpirq rsgvllygap gtgktllagv
      901 varesgmnfi sikgpellsk yigaseqavr difnraqaak pcivffdefd siaprrghds
      961 tgvtdrvvnq lltqldgveg lqgvyvlaat srpdlidpal lrpgrldkcl ycpppdqnsr
     1021 ceilkalshs lslandvdfq dlaakteqft gadlkallyn aqleaihtnl nlgltqdfgs
     1081 ssdsdfslss mvflnhssgs ddsvtdgeav lehslisldm sdllpedprs nmyrlyfgss
     1141 yeselgngtp selsslclsg pnsitydfts itqrdvassq pamlrtasqe gslenqeqqa
     1201 ehlsteinan kanyrsknge dstlnqsvlp kttititqsh lmsalqgmrp sisqddwkhf
     1261 talydsfqnp kkrkvqigat frpgqkitla
//
LOCUS       XP_041322493            1242 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisome biogenesis factor 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322493
VERSION     XP_041322493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466559.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1242
                     /product="peroxisome biogenesis factor 1 isoform X2"
                     /calculated_mol_wt=137274
     Region          15..>58
                     /region_name="PEX-2N"
                     /note="Peroxisome biogenesis factor 1, N-terminal;
                     pfam09263"
                     /db_xref="CDD:462730"
     Region          53..128
                     /region_name="PEX-1N"
                     /note="Peroxisome biogenesis factor 1, N-terminal;
                     pfam09262"
                     /db_xref="CDD:462729"
     Region          331..1018
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..1242
                     /gene="PEX1"
                     /coded_by="XM_041466559.1:69..3797"
                     /db_xref="GeneID:121353044"
ORIGIN      
        1 mwgcgdpgga aaaatvvlsg trdcflhlpp alasllrlqq vflepcshvs scqqvevepl
       61 taddweilel hasslerhll dqirvvfpra ifpvwveqht hvyirigtlv ppapygrlep
      121 ctellicpkt hgpeesitst latesdillk nfvknnmeqe etlkdpfakq pylkpgvleq
      181 sktdanvtfg snvlpniwnf ignifsnase qkqktscdny emsifkdkll nsihmdsifr
      241 vcqsqppsvq nvsttheflk snavhvfpwn leyidldpnp vvsygkinel lsprqrhqea
      301 kqnlplekqn hltstedknp snsnsgqass egsvvqivwn gfedlksvie yghdggalhv
      361 grvwiadglr kklhiemhst vriksiesip kipvsltlqp kqnlhkdihe ddvkcafssw
      421 lqdsttddhp wimtstdcvh lsvkegieef vlsaahpvhi eenksedifi lspsllqktn
      481 iqvvlhplsr kadddsqppm pdrdktlpyh klsdlggldk lgtslfehis hsllgrplsq
      541 klaanavglr sggvlltggk gsgkstlgka ickeaftrld ahvevidcka lkgkrlvnir
      601 khveeaflea awrqpsvllm ddldhivgvp stpehenspe tvqsnrlayv lkdlmkevia
      661 mgslialiat sqsehslhps lvsaqgthif qcfkcirspd qkqryemlys iikrklnsdp
      721 kdfsdldlqc iaketegfva rdftmlvdra ihtcasnpna sdngdlnlst vdfqkalkdf
      781 tplalrnvnl hkpkdlvwdr igglkdvkqm lrdtimlpak ypelfaslpi rqrsgvllyg
      841 apgtgktlla gvvaresgmn fisikgpell skyigaseqa vrdifnraqa akpcivffde
      901 fdsiaprrgh dstgvtdrvv nqlltqldgv eglqgvyvla atsrpdlidp allrpgrldk
      961 clycpppdqn srceilkals hslslandvd fqdlaakteq ftgadlkall ynaqleaiht
     1021 nlnlgltqdf gsssdsdfsl ssmvflnhss gsddsvtdge avlehslisl dmsdllpedp
     1081 rsnmyrlyfg ssyeselgng tpselsslcl sgpnsitydf tsitqrdvas sqpamlrtas
     1141 qegslenqeq qaehlstein ankanyrskn gedstlnqsv lpkttititq shlmsalqgm
     1201 rpsisqddwk hftalydsfq npkkrkvqig atfrpgqkit la
//
LOCUS       XP_041322494             206 aa            linear   VRT 06-MAY-2021
DEFINITION  sclerostin domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322494
VERSION     XP_041322494.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466560.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="sclerostin domain-containing protein 1"
                     /calculated_mol_wt=23151
     Region          12..206
                     /region_name="GHB_like"
                     /note="Glycoprotein hormone beta chain homologues;
                     cl21545"
                     /db_xref="CDD:473907"
     CDS             1..206
                     /gene="SOSTDC1"
                     /coded_by="XM_041466560.1:255..875"
                     /db_xref="GeneID:121353045"
ORIGIN      
        1 mllpaihfyg fflaciftrs ylafkndate ilyshvvkpa aaspssnstl nqarnggrhy
       61 tstgsdrnnr vqvgcrelrs tkyisdgqct sinplkelvc ageclplpll pnwigggygt
      121 kywsrrssqe wrcvndktrt qriqlqcqdg strtykitvv tackckrytr qhnesshnfe
      181 gtsqakpiqh hkerkrgsks skhsts
//
LOCUS       XP_041322495             469 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322495
VERSION     XP_041322495.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466561.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..469
                     /product="cyclin-dependent kinase 14"
                     /calculated_mol_wt=52875
     Region          129..431
                     /region_name="STKc_PFTAIRE1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     PFTAIRE-1 kinase; cd07869"
                     /db_xref="CDD:143374"
     Site            order(141..144,149,162,164,180,194,210..213,216,218..219,
                     256,258,260..261,263,274,277,289,291..294,296,334..335)
                     /site_type="active"
                     /db_xref="CDD:143374"
     Site            order(141..144,149,162,164,194,210..213,216,219,260..261,
                     263,274)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143374"
     Site            order(172..174,176,179..180,182..183,186..187,199,201,206,
                     245,248..251,279,281..284,288..289,405,409..411)
                     /site_type="other"
                     /note="putative CDK/cyclin interface [polypeptide
                     binding]"
                     /db_xref="CDD:143374"
     Site            order(180,218,256,258,277,289,291..294,296,334..335)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143374"
     Site            273..296
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143374"
     CDS             1..469
                     /gene="CDK14"
                     /coded_by="XM_041466561.1:323..1732"
                     /db_xref="GeneID:121353046"
ORIGIN      
        1 mcdmidsqsa ekisrmkklr rtlsesfgri alkkedssfd eicvtkmstr ncqgmdsvik
       61 pldtipedkk vrvqrtqssf dpfekpanqv krvhsennac infktssagk espkvrrhss
      121 pssptspkfg kadsyeklek lgegsyatvy kgkskvngkl valkvirlqe eegtpftair
      181 easllkglkh anivllhdii htketltlvf eyvhtdlcqy mdkhpgglhp envklflfql
      241 lrglsyihqr yilhrdlkpq nllisdtgel kladfglara ksvpshtysn evvtlwyrpp
      301 dvllgsteys tcldmwgvgc ifvemiqgva afpgmkdiqd qleriflvlg tpnedtwpgv
      361 hslphfkper ftqygpknlr qawnklscvn haedlaskll qcfpknrlsa qaalsheyfs
      421 dlpprlwelt dmssiftvpn vrlqpetges mrafgknnsy gkgvsnskh
//
LOCUS       XP_041322496            1860 aa            linear   VRT 06-MAY-2021
DEFINITION  von Willebrand factor D and EGF domain-containing protein
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322496
VERSION     XP_041322496.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466562.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1860
                     /product="von Willebrand factor D and EGF
                     domain-containing protein"
                     /calculated_mol_wt=203549
     Region          438..596
                     /region_name="VWD"
                     /note="von Willebrand factor type D domain; pfam00094"
                     /db_xref="CDD:459671"
     Region          1239..1274
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1239,1242,1255)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1276..1314
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1276,1279,1293)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1860
                     /gene="VWDE"
                     /coded_by="XM_041466562.1:1..5583"
                     /db_xref="GeneID:121353047"
ORIGIN      
        1 mpgaapaapr lwlgvavlgw laaagarrrv lecspgghqi lqspyrsvgf dsshlqqsai
       61 qdlicdhslt pgwyrfmifd kpaemptkcv emnhcgtqap vwlslrgses mprpgeikql
      121 tacatwqfff stskdcclfr ipvrvrncgd ffvyflqptq gcmgycaevv sdarpqtcdp
      181 egmeiegics snlaptssps vspplpsvpe vvaeiikgsi ylrctfgipf ansslgfivt
      241 wsrlspegvk eelthetavh tfslleldgi nvrlgdrvyc ssssffmekp diqsssvesk
      301 effagikihp eaydisedgk eyrltiessi pipcpefsql ksdckisltl nsvdagkeql
      361 glnlalssch vdllqkscnd gicsqaviyf savtdfmqdg dritriavep issenflwng
      421 yvpestqitv kdlptaycys ftdphiitfd grvydnfktg tfvlykstsr dfevhvrqwd
      481 cgslhypasc ncgfvakegs diiafdmcsg qlhesqphls vinrdttgsn vritesylgr
      541 kvtvlfssgt fvradvsewg msltlrapss dyrhtvglcg tfdgnaendy htasgmeipn
      601 hanvhfsfik ewrilpgesl fdktpaslts srkmffcdcs redtrlyqpa nnletvtqse
      661 pplsckesen grflslipgl dvtaeylgpa dlvrglkkrs stqeidlstl lqkqnnqtkl
      721 hktsllnsrl satsvgntgt eregsssldi rrnshhyssh fhraqsatsr gkrqnyyeyh
      781 pvfvfqslsq tdlegysyff pedhvtdtde kllpswptps gltessalfl cqqaianssi
      841 grscaallgr rtgdainmci kdlllkddls wteaslalle necekrilee inyspqelee
      901 sveslltalk cpslcsgnge ctewgcacfh gyssydcsil sdqapeitel enaglcdirq
      961 ydctsvrvfg hgfrdslnlk ceiiklqysd rqwipgeplt mpaafqnart vecqlpsdvq
     1021 qsdvmdvvdd kpiarwqiki sndgfvysns ktmilydgac qtcepqesgl cslkektcni
     1081 dglcygegdt nptspcllcr pdlakltwsv vesnqppvle nfqgmlqtfy gedflyqfla
     1141 sdpegsaihf tldsgpegas lspsgllswk avsmnvhklt fsltddcnat tkveievsvk
     1201 scdclnngsc vtnihfppgs grylcvcvag fegdlcqvnt ddcklnqcgi grcvdginsy
     1261 ycecphelqg kncqedvdec asspcfpgvf cfntfgsyyc gpcpnnlqgd gktcherfdn
     1321 tgverkdskg evgenkgfqp ssfekvlsms gyipsstdvp rrfistemvt istlpastvk
     1381 titayktpds qgsasiqpvv tgniaralgt isghladven sssvhvvmaa ssrshavspe
     1441 kktraqveaf syfessrkts psstasiskg htlpnkafkd gnaqrvlhll akqqasnlpf
     1501 tlvevtvppk mlpeelsetv ipkavtwsdl pcfpgvpcep rqdgsvkcgr cpygyygdgf
     1561 icrarcrqpc gknmecvapn ickckpgfag hncqaalcrp dcknhgkcik pnicdclpgy
     1621 sgstceeahc kppcqnggtc larnlctcpy gfvgprcdtm vcnrhcengg ecltpdtcqc
     1681 kpgwygptcs tamcnpvcln ggsctkpdvc lcphgffgar cqnavcsppc kngghcmrnn
     1741 vctcpdgytg rrceksvcep rcmnggrcvg pnicscpsgw rgkrcntpic lqecknggec
     1801 igpstchcpp qwegfqcqtp vcsqkclfgg kcvlpnvcsc rpgytgvlcg kkiqvqrhhg
//
LOCUS       XP_041322497             139 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 126 [Pyrgilauda ruficollis].
ACCESSION   XP_041322497
VERSION     XP_041322497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="coiled-coil domain-containing protein 126"
                     /calculated_mol_wt=15512
     Region          3..138
                     /region_name="DUF4525"
                     /note="Domain of unknown function (DUF4525); pfam15027"
                     /db_xref="CDD:373487"
     CDS             1..139
                     /gene="CCDC126"
                     /coded_by="XM_041466563.1:830..1249"
                     /db_xref="GeneID:121353048"
ORIGIN      
        1 mfltfsrknm sqklsmflli fgiiwglmll rytfqyprrq ssaelrgqil dlskryvkal
       61 aeenknlmng gggasmsgya dlkrtiavll ddilqrlvkl enkvdyivvn gsatnttngt
      121 nhqvpvtsnk rakpasnir
//
LOCUS       XP_041322498             139 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 126 [Pyrgilauda ruficollis].
ACCESSION   XP_041322498
VERSION     XP_041322498.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466564.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="coiled-coil domain-containing protein 126"
                     /calculated_mol_wt=15512
     Region          3..138
                     /region_name="DUF4525"
                     /note="Domain of unknown function (DUF4525); pfam15027"
                     /db_xref="CDD:373487"
     CDS             1..139
                     /gene="CCDC126"
                     /coded_by="XM_041466564.1:623..1042"
                     /db_xref="GeneID:121353048"
ORIGIN      
        1 mfltfsrknm sqklsmflli fgiiwglmll rytfqyprrq ssaelrgqil dlskryvkal
       61 aeenknlmng gggasmsgya dlkrtiavll ddilqrlvkl enkvdyivvn gsatnttngt
      121 nhqvpvtsnk rakpasnir
//
LOCUS       XP_041322499             585 aa            linear   VRT 06-MAY-2021
DEFINITION  frizzled-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322499
VERSION     XP_041322499.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466565.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..585
                     /product="frizzled-1"
                     /calculated_mol_wt=64795
     Region          56..182
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Site            order(67,69..70,73..75)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143549"
     Region          241..584
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          261..285
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          294..315
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          345..367
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          388..404
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          426..449
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          480..502
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          534..559
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..585
                     /gene="FZD1"
                     /coded_by="XM_041466565.1:148..1905"
                     /db_xref="GeneID:121353049"
ORIGIN      
        1 maerrgpavs gggevgsgrc prlplllvll waaalpaggq lpasqynger gisipdhgyc
       61 qpisiplctd iaynqtimpn llghtnqeda glevhqfypl vkvqcslelk fflcsmyapv
      121 ctvleqalpp crslcerarq gcealmnkfg fqwpdtlrce kfpvhgagel cvgqnaserg
      181 tptpalrpes wtsnphrgga gggpggpgpg eprgrftcpr alkvpsylny rflgekdcga
      241 pcepgrlygl myfgpeelrf srtwigiwsv lccastlftv ltylvdmkrf syperpiifl
      301 sgcytavava yiagflleer vvcnerfaed gsrtvaqgtk regctilfmm lyffgmassi
      361 wwvilsltwf laagmkwghe aieansqyfh laawavpaik titilalgqv dgdvlsgvcf
      421 vginnvdalr gfvlaplfvy lfigtsflla gfvslfrirt imkhdgtkte kleklmvrig
      481 ifsvlytvpa tiviacyfye qafreqwers wvtqscksya ipcpnnhsgh hppmspdftv
      541 fmikylmtli vgitsgfwiw sgktlnswrk fytrltnskq gettv
//
LOCUS       XP_041322501             888 aa            linear   VRT 06-MAY-2021
DEFINITION  oxysterol-binding protein-related protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322501
VERSION     XP_041322501.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466567.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..888
                     /product="oxysterol-binding protein-related protein 3
                     isoform X1"
                     /calculated_mol_wt=101193
     Region          30..152
                     /region_name="PH_ORP3_ORP6_ORP7"
                     /note="Human Oxysterol binding protein related proteins 3,
                     6, and 7 Pleckstrin homology (PH) domain; cd13287"
                     /db_xref="CDD:270104"
     Region          528..875
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     CDS             1..888
                     /gene="OSBPL3"
                     /coded_by="XM_041466567.1:402..3068"
                     /db_xref="GeneID:121353050"
ORIGIN      
        1 mseeknfgas qkmlspsrst sscsskqgsr qdsweivegl rgamnctqep qkqegcllkk
       61 rkwplkgwhk ryffldrgil kyskcradie rgklhgcidv glsvmsvkks tkcidldtee
      121 qiyhlkvksq elfdewvakl rhhrmyrqne ismfphdann iffpvstttd svpgfcdptp
      181 grkagsltkq nststggnls fsfssnesri sswlqssedm ekcsrdlsnc htyllemnql
      241 lqsmdvlhrt ysapainamq vgpfespkke krthrrwrsr vvgkeakgml qvpsvfsapm
      301 rlhasnpnls tidfveekny sdgsetssef tkmqedlfhv ahkvyftlrs afstistere
      361 klkqmleyda ssspsaqivg lknaltsaia qntdlkdrlr rihaeskiid sasnaksspd
      421 lvkensreeg rglvhqvsne srlsiadslt effdaqevll sasssenevs dddsyvsdis
      481 dnvsednlsn dmenerqtld cisesgigcn skrrtclpap cpntsnislw nilrnnigkd
      541 lskvampvel neplntlqrl ceeleysell dkaahtpnpf ermvyiaafa vsayassyyr
      601 agskpfnpvl getyecired kgfqffaeqv shhppisach aesvnfafwq dvrwknkfwg
      661 ksmeivpvgt thvtlpafkd hfawnkvtsc ihnilsgqrw iehygeiiik nlnddtchck
      721 ltfikakywn pnaheiegsv vdksgkvvhr lfgkwhesly cgtssssnci wranpmpkdf
      781 eqwygftqfa lelneldpqt rsllpstdtr frpdqrflee gniegaemqk qrieqlqrer
      841 rkvleennle hqprffrkss ddswvsngty mdlrkepgfs kldnpvlw
//
LOCUS       XP_041322502             852 aa            linear   VRT 06-MAY-2021
DEFINITION  oxysterol-binding protein-related protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322502
VERSION     XP_041322502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..852
                     /product="oxysterol-binding protein-related protein 3
                     isoform X2"
                     /calculated_mol_wt=97249
     Region          30..152
                     /region_name="PH_ORP3_ORP6_ORP7"
                     /note="Human Oxysterol binding protein related proteins 3,
                     6, and 7 Pleckstrin homology (PH) domain; cd13287"
                     /db_xref="CDD:270104"
     Region          492..839
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     CDS             1..852
                     /gene="OSBPL3"
                     /coded_by="XM_041466568.1:402..2960"
                     /db_xref="GeneID:121353050"
ORIGIN      
        1 mseeknfgas qkmlspsrst sscsskqgsr qdsweivegl rgamnctqep qkqegcllkk
       61 rkwplkgwhk ryffldrgil kyskcradie rgklhgcidv glsvmsvkks tkcidldtee
      121 qiyhlkvksq elfdewvakl rhhrmyrqne ismfphdann iffpvstttd svpgfcdptp
      181 grkagsltkq nststggnls fsfssnesri sswlqssedm ekcsrdlsnc htyllemnql
      241 lqsmdvlhrt ysapainamq vgpfespkke krthrrwrsr vvgkeakgml qvpsvfsapm
      301 rlhasnpnls tidfveekny sdgsetssef tkmqedlfhv ahkvyftlrs afstistere
      361 klkqmleyda ssspsaqivg lknaltsens reegrglvhq vsnesrlsia dslteffdaq
      421 evllsassse nevsdddsyv sdisdnvsed nlsndmener qtldcisesg igcnskrrtc
      481 lpapcpntsn islwnilrnn igkdlskvam pvelneplnt lqrlceeley selldkaaht
      541 pnpfermvyi aafavsayas syyragskpf npvlgetyec iredkgfqff aeqvshhppi
      601 sachaesvnf afwqdvrwkn kfwgksmeiv pvgtthvtlp afkdhfawnk vtscihnils
      661 gqrwiehyge iiiknlnddt chckltfika kywnpnahei egsvvdksgk vvhrlfgkwh
      721 eslycgtsss snciwranpm pkdfeqwygf tqfalelnel dpqtrsllps tdtrfrpdqr
      781 fleegniega emqkqrieql qrerrkvlee nnlehqprff rkssddswvs ngtymdlrke
      841 pgfskldnpv lw
//
LOCUS       XP_041322503             568 aa            linear   VRT 06-MAY-2021
DEFINITION  TGF-beta receptor type-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322503
VERSION     XP_041322503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466569.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="TGF-beta receptor type-2"
                     /calculated_mol_wt=64616
     Region          50..150
                     /region_name="TFP_LU_ECD_TGFR2"
                     /note="extracellular domain (ECD) found in TGF-beta
                     receptor type-2 (TGFR-2) and similar proteins; cd23538"
                     /db_xref="CDD:467068"
     Region          249..543
                     /region_name="STKc_TGFbR2_like"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Transforming Growth Factor beta Type II Receptor; cd14055"
                     /db_xref="CDD:270957"
     Site            order(251..257,259,276,278,306,326..329,333,335,380,382,
                     384..385,387,398,401,421..424)
                     /site_type="active"
                     /db_xref="CDD:270957"
     Site            order(251..257,259,276,278,326..327,329,333,384..385,387,
                     398)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270957"
     Site            order(255,333,335,380,382,384,401,421..424)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270957"
     Site            397..424
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270957"
     CDS             1..568
                     /gene="TGFBR2"
                     /coded_by="XM_041466569.1:259..1965"
                     /db_xref="GeneID:121353051"
ORIGIN      
        1 mtprlprslr rlllrlslwv lmgssvpall raeftspver nkesglkmsn lckfcdikvt
       61 tcsnqhrcks ncnitsicek ssevcvaiwr qndenvtlet ichdpqetly ghflddynse
      121 qclmrekkdd gglmfmcsct geecndmlif tsddphkpee kdeiskvtii slvpllvisv
      181 avivifyayr thkkrklska weknvkpkkh kdcsdgcaim ldddrsdiss tcanninhnt
      241 ellpieldav vgkgrfaevy kaklkqntse qyetvavkif syeeyaswkt ekdifsdvnl
      301 khenilqflt aeerktdlgk qywlitafha kgnlqeyltr hiiswedlwk lggslargia
      361 hlhsdhtpcg rpktpivhrd lkssnilvkn dltcclcdfg lslrldpsls vddlansgqv
      421 gtarymapev lesrmnlenm esfkqtdvys malvlwemts rcnavgevke yeppfgskvr
      481 ehpcvesmkd nvlrdrgrpe ipsswlnhqg iqmvcetlie cwdhdpearl taqcvaerfs
      541 elkhhdrlsg rscseekipe dgsmttak
//
LOCUS       XP_041322504             568 aa            linear   VRT 06-MAY-2021
DEFINITION  TGF-beta receptor type-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322504
VERSION     XP_041322504.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466570.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="TGF-beta receptor type-2"
                     /calculated_mol_wt=64616
     Region          50..150
                     /region_name="TFP_LU_ECD_TGFR2"
                     /note="extracellular domain (ECD) found in TGF-beta
                     receptor type-2 (TGFR-2) and similar proteins; cd23538"
                     /db_xref="CDD:467068"
     Region          249..543
                     /region_name="STKc_TGFbR2_like"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Transforming Growth Factor beta Type II Receptor; cd14055"
                     /db_xref="CDD:270957"
     Site            order(251..257,259,276,278,306,326..329,333,335,380,382,
                     384..385,387,398,401,421..424)
                     /site_type="active"
                     /db_xref="CDD:270957"
     Site            order(251..257,259,276,278,326..327,329,333,384..385,387,
                     398)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270957"
     Site            order(255,333,335,380,382,384,401,421..424)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270957"
     Site            397..424
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270957"
     CDS             1..568
                     /gene="TGFBR2"
                     /coded_by="XM_041466570.1:284..1990"
                     /db_xref="GeneID:121353051"
ORIGIN      
        1 mtprlprslr rlllrlslwv lmgssvpall raeftspver nkesglkmsn lckfcdikvt
       61 tcsnqhrcks ncnitsicek ssevcvaiwr qndenvtlet ichdpqetly ghflddynse
      121 qclmrekkdd gglmfmcsct geecndmlif tsddphkpee kdeiskvtii slvpllvisv
      181 avivifyayr thkkrklska weknvkpkkh kdcsdgcaim ldddrsdiss tcanninhnt
      241 ellpieldav vgkgrfaevy kaklkqntse qyetvavkif syeeyaswkt ekdifsdvnl
      301 khenilqflt aeerktdlgk qywlitafha kgnlqeyltr hiiswedlwk lggslargia
      361 hlhsdhtpcg rpktpivhrd lkssnilvkn dltcclcdfg lslrldpsls vddlansgqv
      421 gtarymapev lesrmnlenm esfkqtdvys malvlwemts rcnavgevke yeppfgskvr
      481 ehpcvesmkd nvlrdrgrpe ipsswlnhqg iqmvcetlie cwdhdpearl taqcvaerfs
      541 elkhhdrlsg rscseekipe dgsmttak
//
LOCUS       XP_041322505             485 aa            linear   VRT 06-MAY-2021
DEFINITION  epsilon-sarcoglycan isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322505
VERSION     XP_041322505.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466571.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="epsilon-sarcoglycan isoform X1"
                     /calculated_mol_wt=54871
     Region          72..454
                     /region_name="Sarcoglycan_2"
                     /note="Sarcoglycan alpha/epsilon; pfam05510"
                     /db_xref="CDD:461668"
     CDS             1..485
                     /gene="SGCE"
                     /coded_by="XM_041466571.1:76..1533"
                     /db_xref="GeneID:121353052"
ORIGIN      
        1 mrrrwcrqqq aeergamrcc aagpwphsal ttllltaill ssadgnngtv nwttkrahsy
       61 visrikavqk nvytilskvh sdrnvypsag vlfvhvlere yfkgefppyp kpgeisndpi
      121 tfntnlmgyp drpgwlryiq rtpysdgvly gsptvenvgk ptiieitayn rrtfetarhn
      181 liinimsaed fplpyqaeff irnmnveeml asevlgdflg avknvwqper lnainitsal
      241 drggrvplpi ndmkegvyvm vgadvpfssc lrevenpqnq lrcsqemepv itcdkkfrtq
      301 fhidwckisl vdntkqvstf qevirgegil pdggeykpps dtlksrdyys dflitlavps
      361 aialvlflil ayimccrreg vekrnmqtpd iqlvhhsaiq kstkelrdms knreiawpls
      421 tlpvfhpvtg eivpplhtds ydntsmplmq tqqnlphqtq ipqqqsaeav cssghcivsr
      481 klrll
//
LOCUS       XP_041322506             473 aa            linear   VRT 06-MAY-2021
DEFINITION  epsilon-sarcoglycan isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322506
VERSION     XP_041322506.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466572.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="epsilon-sarcoglycan isoform X2"
                     /calculated_mol_wt=53639
     Region          72..455
                     /region_name="Sarcoglycan_2"
                     /note="Sarcoglycan alpha/epsilon; pfam05510"
                     /db_xref="CDD:461668"
     CDS             1..473
                     /gene="SGCE"
                     /coded_by="XM_041466572.1:76..1497"
                     /db_xref="GeneID:121353052"
ORIGIN      
        1 mrrrwcrqqq aeergamrcc aagpwphsal ttllltaill ssadgnngtv nwttkrahsy
       61 visrikavqk nvytilskvh sdrnvypsag vlfvhvlere yfkgefppyp kpgeisndpi
      121 tfntnlmgyp drpgwlryiq rtpysdgvly gsptvenvgk ptiieitayn rrtfetarhn
      181 liinimsaev dfplpyqaef firnmnveem lasevlgdfl gavknvwqpe rlnainitsa
      241 ldrggrvplp indmkegvyv mvgadvpfss clrevenpqn qlrcsqemep vitcdkkfrt
      301 qfhidwckis lvdntkqvst fqevirgegi lpdggeykpp sdtlksrdyy sdflitlavp
      361 saialvlfli layimccrre gvekrnmqtp diqlvhhsai qkstkelrdm sknreiawpl
      421 stlpvfhpvt geivpplhtd sydntsmplm qtqqnlphqt qipqqqsagk wys
//
LOCUS       XP_041322507             454 aa            linear   VRT 06-MAY-2021
DEFINITION  epsilon-sarcoglycan isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322507
VERSION     XP_041322507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="epsilon-sarcoglycan isoform X3"
                     /calculated_mol_wt=51445
     Region          72..454
                     /region_name="Sarcoglycan_2"
                     /note="Sarcoglycan alpha/epsilon; pfam05510"
                     /db_xref="CDD:461668"
     CDS             1..454
                     /gene="SGCE"
                     /coded_by="XM_041466573.1:76..1440"
                     /db_xref="GeneID:121353052"
ORIGIN      
        1 mrrrwcrqqq aeergamrcc aagpwphsal ttllltaill ssadgnngtv nwttkrahsy
       61 visrikavqk nvytilskvh sdrnvypsag vlfvhvlere yfkgefppyp kpgeisndpi
      121 tfntnlmgyp drpgwlryiq rtpysdgvly gsptvenvgk ptiieitayn rrtfetarhn
      181 liinimsaev dfplpyqaef firnmnveem lasevlgdfl gavknvwqpe rlnainitsa
      241 ldrggrvplp indmkegvyv mvgadvpfss clrevenpqn qlrcsqemep vitcdkkfrt
      301 qfhidwckis lvdntkqvst fqevirgegi lpdggeykpp sdtlksrdyy sdflitlavp
      361 saialvlfli layimccrre gvekrnmqtp diqlvhhsai qkstkelrdm sknreiawpl
      421 stlpvfhpvt geivpplhtd sydntsmplm qtqq
//
LOCUS       XP_041322508             451 aa            linear   VRT 06-MAY-2021
DEFINITION  epsilon-sarcoglycan isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322508
VERSION     XP_041322508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..451
                     /product="epsilon-sarcoglycan isoform X4"
                     /calculated_mol_wt=51174
     Region          37..420
                     /region_name="Sarcoglycan_2"
                     /note="Sarcoglycan alpha/epsilon; pfam05510"
                     /db_xref="CDD:461668"
     CDS             1..451
                     /gene="SGCE"
                     /coded_by="XM_041466574.1:76..1431"
                     /db_xref="GeneID:121353052"
ORIGIN      
        1 mrrrwcrqqq aeergamrcc aagpwphsal ttllltvyti lskvhsdrnv ypsagvlfvh
       61 vlereyfkge fppypkpgei sndpitfntn lmgypdrpgw lryiqrtpys dgvlygsptv
      121 envgkptiie itaynrrtfe tarhnliini msaevdfplp yqaeffirnm nveemlasev
      181 lgdflgavkn vwqperlnai nitsaldrgg rvplpindmk egvyvmvgad vpfssclrev
      241 enpqnqlrcs qemepvitcd kkfrtqfhid wckislvdnt kqvstfqevi rgegilpdgg
      301 eykppsdtlk srdyysdfli tlavpsaial vlflilayim ccrregvekr nmqtpdiqlv
      361 hhsaiqkstk elrdmsknre iawplstlpv fhpvtgeivp plhtdsydnt smplmqtqqn
      421 lphqtqipqq qsaeavcssg hcivsrklrl l
//
LOCUS       XP_041322509             450 aa            linear   VRT 06-MAY-2021
DEFINITION  epsilon-sarcoglycan isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322509
VERSION     XP_041322509.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466575.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="epsilon-sarcoglycan isoform X5"
                     /calculated_mol_wt=51075
     Region          37..419
                     /region_name="Sarcoglycan_2"
                     /note="Sarcoglycan alpha/epsilon; pfam05510"
                     /db_xref="CDD:461668"
     CDS             1..450
                     /gene="SGCE"
                     /coded_by="XM_041466575.1:76..1428"
                     /db_xref="GeneID:121353052"
ORIGIN      
        1 mrrrwcrqqq aeergamrcc aagpwphsal ttllltvyti lskvhsdrnv ypsagvlfvh
       61 vlereyfkge fppypkpgei sndpitfntn lmgypdrpgw lryiqrtpys dgvlygsptv
      121 envgkptiie itaynrrtfe tarhnliini msaedfplpy qaeffirnmn veemlasevl
      181 gdflgavknv wqperlnain itsaldrggr vplpindmke gvyvmvgadv pfssclreve
      241 npqnqlrcsq emepvitcdk kfrtqfhidw ckislvdntk qvstfqevir gegilpdgge
      301 ykppsdtlks rdyysdflit lavpsaialv lflilayimc crregvekrn mqtpdiqlvh
      361 hsaiqkstke lrdmsknrei awplstlpvf hpvtgeivpp lhtdsydnts mplmqtqqnl
      421 phqtqipqqq saeavcssgh civsrklrll
//
LOCUS       XP_041322510             445 aa            linear   VRT 06-MAY-2021
DEFINITION  epsilon-sarcoglycan isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322510
VERSION     XP_041322510.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466576.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="epsilon-sarcoglycan isoform X6"
                     /calculated_mol_wt=50208
     Region          73..414
                     /region_name="Sarcoglycan_2"
                     /note="Sarcoglycan alpha/epsilon; pfam05510"
                     /db_xref="CDD:461668"
     CDS             1..445
                     /gene="SGCE"
                     /coded_by="XM_041466576.1:76..1413"
                     /db_xref="GeneID:121353052"
ORIGIN      
        1 mrrrwcrqqq aeergamrcc aagpwphsal ttllltaill ssadgnngtv nwttkrahsy
       61 visrikavqk ngeisndpit fntnlmgypd rpgwlryiqr tpysdgvlyg sptvenvgkp
      121 tiieitaynr rtfetarhnl iinimsaevd fplpyqaeff irnmnveeml asevlgdflg
      181 avknvwqper lnainitsal drggrvplpi ndmkegvyvm vgadvpfssc lrevenpqnq
      241 lrcsqemepv itcdkkfrtq fhidwckisl vdntkqvstf qevirgegil pdggeykpps
      301 dtlksrdyys dflitlavps aialvlflil ayimccrreg vekrnmqtpd iqlvhhsaiq
      361 kstkelrdms knreiawpls tlpvfhpvtg eivpplhtds ydntsmplmq tqqnlphqtq
      421 ipqqqsaeav cssghcivsr klrll
//
LOCUS       XP_041322511             410 aa            linear   VRT 06-MAY-2021
DEFINITION  epsilon-sarcoglycan isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041322511
VERSION     XP_041322511.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466577.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="epsilon-sarcoglycan isoform X7"
                     /calculated_mol_wt=46411
     Region          36..379
                     /region_name="Sarcoglycan_2"
                     /note="Sarcoglycan alpha/epsilon; pfam05510"
                     /db_xref="CDD:461668"
     CDS             1..410
                     /gene="SGCE"
                     /coded_by="XM_041466577.1:76..1308"
                     /db_xref="GeneID:121353052"
ORIGIN      
        1 mrrrwcrqqq aeergamrcc aagpwphsal ttllltgeis ndpitfntnl mgypdrpgwl
       61 ryiqrtpysd gvlygsptve nvgkptiiei taynrrtfet arhnliinim saevdfplpy
      121 qaeffirnmn veemlasevl gdflgavknv wqperlnain itsaldrggr vplpindmke
      181 gvyvmvgadv pfssclreve npqnqlrcsq emepvitcdk kfrtqfhidw ckislvdntk
      241 qvstfqevir gegilpdgge ykppsdtlks rdyysdflit lavpsaialv lflilayimc
      301 crregvekrn mqtpdiqlvh hsaiqkstke lrdmsknrei awplstlpvf hpvtgeivpp
      361 lhtdsydnts mplmqtqqnl phqtqipqqq saeavcssgh civsrklrll
//
LOCUS       XP_041322512             173 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-FMRFamide-related neuropeptide VF [Pyrgilauda ruficollis].
ACCESSION   XP_041322512
VERSION     XP_041322512.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466578.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..173
                     /product="pro-FMRFamide-related neuropeptide VF"
                     /calculated_mol_wt=19697
     CDS             1..173
                     /gene="NPVF"
                     /coded_by="XM_041466578.1:35..556"
                     /db_xref="GeneID:121353054"
ORIGIN      
        1 mevistkkfi lfalatvvfl tsnsmclnep mksrlqsred nddkyyeikd nifeekqrsl
       61 nfeemedwgs kdiikmntft askmpnsvan lplrfgrnyp eersikpfsn lplrfgrafg
      121 enilnhapkv shrlgrsplv kgssqsllnl pqrfgkslav nlprdieese pgi
//
LOCUS       XP_041322513             404 aa            linear   VRT 06-MAY-2021
DEFINITION  phakinin [Pyrgilauda ruficollis].
ACCESSION   XP_041322513
VERSION     XP_041322513.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466579.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="phakinin"
                     /calculated_mol_wt=44935
     Region          100..403
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..404
                     /gene="BFSP2"
                     /coded_by="XM_041466579.1:97..1311"
                     /db_xref="GeneID:121353055"
ORIGIN      
        1 mplprrrssf lgqqpstsaa essgppgrrv svggggslsr ppgvyvgtvp tggvsslgtr
       61 vsrralgiss vflqglrssa aavplapgld kgrglsyesl ngclveyiek vraleqvnqe
      121 leehirvyld kkaasvsswg alrenweaiy hqvgeavlen arlmlhteni qacaedfkdr
      181 yeneqpfrka vedeinslyk viddanltkm dlesqiesmk eelallsknh eedvkvlykq
      241 lagsqleeld vplgsglddi lekirihwer dieknraetg allrtkqqae tmaavrtqee
      301 elveglrtef hetackiqsl qaeteslrtl krglenslyd akhwhdielq nlgsviskle
      361 aemgeikvet eqqqrdrenl ltskqqlekd iaayhclldg eqss
//
LOCUS       XP_041322514             939 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 14 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322514
VERSION     XP_041322514.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466580.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..939
                     /product="PHD finger protein 14 isoform X1"
                     /calculated_mol_wt=105657
     Region          <265..>607
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          338..451
                     /region_name="ePHD_PHF14"
                     /note="Extended PHD finger found in PHD finger protein 14
                     (PHF14) and similar proteins; cd15674"
                     /db_xref="CDD:277144"
     Site            order(393,407..411,417,446)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277144"
     Region          680..729
                     /region_name="PHD2_PHF14"
                     /note="PHD finger 2 found in PHD finger protein 14 (PHF14)
                     and similar proteins; cd15562"
                     /db_xref="CDD:277037"
     Site            order(680,692..696,700,724)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277037"
     Region          823..871
                     /region_name="PHD3_PHF14"
                     /note="PHD finger 3 found in PHD finger protein 14 (PHF14)
                     and similar proteins; cd15563"
                     /db_xref="CDD:277038"
     Site            order(823,835..839,843,866)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277038"
     CDS             1..939
                     /gene="PHF14"
                     /coded_by="XM_041466580.1:143..2962"
                     /db_xref="GeneID:121353056"
ORIGIN      
        1 mdrsskrrqv kplaasllea ldydssddsd fkvgdasdse gsghgsedas kdsgegscte
       61 seenileeep aeekveeqqp kasteevptt dkeviktekk eqedeeekpk kkkekekaae
      121 pdavadeqtn epkkwnlrrn rplldfvsme elndmddyds eddndwrpta ekrkgknalk
      181 kegsdgdned deddgsgsde ddndeeanee dnsstasdgg skkkkskvln rnnaddeelt
      241 ndslalsqsk snedslilek sqnwssqkmd hiliccvclg dnsedadeii qcdncgitvh
      301 egcygvdges dsimssasen stepwfcdac kcgvtpscel cpnqdgifke tdagrwvhiv
      361 calyvpgvaf gdidklrpvt ltemnyskyg akecsfcedp rfartgvcis cdagmcrayf
      421 hvtcaqkegl lseaaaeedi adpffayckq hadrldrkwk rknylalqsy ckmslqerek
      481 qlspeaqari narlqqyrak aelarttrpq awvpreklpr pltssasair klmrkaelmg
      541 istdifpvdt sdtsssvdgr rkhkqpalta dfvnyylern mrmiqiqenm aeqknikdkl
      601 eneqeklhve ynklceslee lqnmngklrn egqgiwallg riigqklnip ailrapkerk
      661 pskkeggtqk astlpavlys cgickknhdq hllllcdtck lhyhlgcldp pltrmprktk
      721 nsywqcsecd qagssdmead iametlpdgt krsrrqikep vkfvpqdvpt epkkipirnt
      781 rtrgrkrsfv peeekpeeri prerrqrqsv lqkkpksedl rtecatckgt gdnenlvrcd
      841 ecrlcyhfgc ldpplkkspk qtgygwicqe cdstsskdse psnevvseap gnvvpstsrs
      901 sseelvsvaq krpeeeeene aeaenpsqel nleqkkskk
//
LOCUS       XP_041322515             938 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 14 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322515
VERSION     XP_041322515.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466581.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..938
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..938
                     /product="PHD finger protein 14 isoform X2"
                     /calculated_mol_wt=105464
     Region          <265..>607
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          338..451
                     /region_name="ePHD_PHF14"
                     /note="Extended PHD finger found in PHD finger protein 14
                     (PHF14) and similar proteins; cd15674"
                     /db_xref="CDD:277144"
     Site            order(393,407..411,417,446)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277144"
     Region          680..729
                     /region_name="PHD2_PHF14"
                     /note="PHD finger 2 found in PHD finger protein 14 (PHF14)
                     and similar proteins; cd15562"
                     /db_xref="CDD:277037"
     Site            order(680,692..696,700,724)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277037"
     Region          823..871
                     /region_name="PHD3_PHF14"
                     /note="PHD finger 3 found in PHD finger protein 14 (PHF14)
                     and similar proteins; cd15563"
                     /db_xref="CDD:277038"
     Site            order(823,835..839,843,866)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277038"
     CDS             1..938
                     /gene="PHF14"
                     /coded_by="XM_041466581.1:143..2959"
                     /db_xref="GeneID:121353056"
ORIGIN      
        1 mdrsskrrqv kplaasllea ldydssddsd fkvgdasdse gsghgsedas kdsgegscte
       61 seenileeep aeekveeqqp kasteevptt dkeviktekk eqedeeekpk kkkekekaae
      121 pdavadeqtn epkkwnlrrn rplldfvsme elndmddyds eddndwrpta ekrkgknalk
      181 kegsdgdned deddgsgsde ddndeeanee dnsstasdgg skkkkskvln rnnaddeelt
      241 ndslalsqsk snedslilek sqnwssqkmd hiliccvclg dnsedadeii qcdncgitvh
      301 egcygvdges dsimssasen stepwfcdac kcgvtpscel cpnqdgifke tdagrwvhiv
      361 calyvpgvaf gdidklrpvt ltemnyskyg akecsfcedp rfartgvcis cdagmcrayf
      421 hvtcaqkegl lseaaaeedi adpffayckq hadrldrkwk rknylalqsy ckmslqerek
      481 qlspeaqari narlqqyrak aelarttrpq awvpreklpr pltssasair klmrkaelmg
      541 istdifpvdt sdtsssvdgr rkhkqpalta dfvnyylern mrmiqiqenm aeqknikdkl
      601 eneqeklhve ynklceslee lqnmngklrn egqgiwallg riigqklnip ailrapkerk
      661 pskkeggtqk astlpavlys cgickknhdq hllllcdtck lhyhlgcldp pltrmprktk
      721 nsywqcsecd qagssdmead iametlpdgt krsrrqikep vkfvpqdvpt epkkipirnt
      781 rtrgrkrsfv peeekpeeri prerrqrqsv lqkkpksedl rtecatckgt gdnenlvrcd
      841 ecrlcyhfgc ldpplkkspk qtgygwicqe cdstsskdse psnevvseap gnvvpstsrs
      901 sseelvsvaq krpeegtlrg ehqyaefans eptmkqti
//
LOCUS       XP_041322516             901 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 14 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322516
VERSION     XP_041322516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..901
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..901
                     /product="PHD finger protein 14 isoform X3"
                     /calculated_mol_wt=101661
     Region          <265..>607
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          338..451
                     /region_name="ePHD_PHF14"
                     /note="Extended PHD finger found in PHD finger protein 14
                     (PHF14) and similar proteins; cd15674"
                     /db_xref="CDD:277144"
     Site            order(393,407..411,417,446)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277144"
     Region          680..729
                     /region_name="PHD2_PHF14"
                     /note="PHD finger 2 found in PHD finger protein 14 (PHF14)
                     and similar proteins; cd15562"
                     /db_xref="CDD:277037"
     Site            order(680,692..696,700,724)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277037"
     Region          823..871
                     /region_name="PHD3_PHF14"
                     /note="PHD finger 3 found in PHD finger protein 14 (PHF14)
                     and similar proteins; cd15563"
                     /db_xref="CDD:277038"
     Site            order(823,835..839,843,866)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277038"
     CDS             1..901
                     /gene="PHF14"
                     /coded_by="XM_041466582.1:143..2848"
                     /db_xref="GeneID:121353056"
ORIGIN      
        1 mdrsskrrqv kplaasllea ldydssddsd fkvgdasdse gsghgsedas kdsgegscte
       61 seenileeep aeekveeqqp kasteevptt dkeviktekk eqedeeekpk kkkekekaae
      121 pdavadeqtn epkkwnlrrn rplldfvsme elndmddyds eddndwrpta ekrkgknalk
      181 kegsdgdned deddgsgsde ddndeeanee dnsstasdgg skkkkskvln rnnaddeelt
      241 ndslalsqsk snedslilek sqnwssqkmd hiliccvclg dnsedadeii qcdncgitvh
      301 egcygvdges dsimssasen stepwfcdac kcgvtpscel cpnqdgifke tdagrwvhiv
      361 calyvpgvaf gdidklrpvt ltemnyskyg akecsfcedp rfartgvcis cdagmcrayf
      421 hvtcaqkegl lseaaaeedi adpffayckq hadrldrkwk rknylalqsy ckmslqerek
      481 qlspeaqari narlqqyrak aelarttrpq awvpreklpr pltssasair klmrkaelmg
      541 istdifpvdt sdtsssvdgr rkhkqpalta dfvnyylern mrmiqiqenm aeqknikdkl
      601 eneqeklhve ynklceslee lqnmngklrn egqgiwallg riigqklnip ailrapkerk
      661 pskkeggtqk astlpavlys cgickknhdq hllllcdtck lhyhlgcldp pltrmprktk
      721 nsywqcsecd qagssdmead iametlpdgt krsrrqikep vkfvpqdvpt epkkipirnt
      781 rtrgrkrsfv peeekpeeri prerrqrqsv lqkkpksedl rtecatckgt gdnenlvrcd
      841 ecrlcyhfgc ldpplkkspk qtgygwicqe cdstsskeee neaeaenpsq elnleqkksk
      901 k
//
LOCUS       XP_041322517             841 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 14 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322517
VERSION     XP_041322517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466583.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..841
                     /product="PHD finger protein 14 isoform X4"
                     /calculated_mol_wt=94814
     Region          <265..>607
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          338..451
                     /region_name="ePHD_PHF14"
                     /note="Extended PHD finger found in PHD finger protein 14
                     (PHF14) and similar proteins; cd15674"
                     /db_xref="CDD:277144"
     Site            order(393,407..411,417,446)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277144"
     Region          680..729
                     /region_name="PHD2_PHF14"
                     /note="PHD finger 2 found in PHD finger protein 14 (PHF14)
                     and similar proteins; cd15562"
                     /db_xref="CDD:277037"
     Site            order(680,692..696,700,724)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277037"
     CDS             1..841
                     /gene="PHF14"
                     /coded_by="XM_041466583.1:143..2668"
                     /db_xref="GeneID:121353056"
ORIGIN      
        1 mdrsskrrqv kplaasllea ldydssddsd fkvgdasdse gsghgsedas kdsgegscte
       61 seenileeep aeekveeqqp kasteevptt dkeviktekk eqedeeekpk kkkekekaae
      121 pdavadeqtn epkkwnlrrn rplldfvsme elndmddyds eddndwrpta ekrkgknalk
      181 kegsdgdned deddgsgsde ddndeeanee dnsstasdgg skkkkskvln rnnaddeelt
      241 ndslalsqsk snedslilek sqnwssqkmd hiliccvclg dnsedadeii qcdncgitvh
      301 egcygvdges dsimssasen stepwfcdac kcgvtpscel cpnqdgifke tdagrwvhiv
      361 calyvpgvaf gdidklrpvt ltemnyskyg akecsfcedp rfartgvcis cdagmcrayf
      421 hvtcaqkegl lseaaaeedi adpffayckq hadrldrkwk rknylalqsy ckmslqerek
      481 qlspeaqari narlqqyrak aelarttrpq awvpreklpr pltssasair klmrkaelmg
      541 istdifpvdt sdtsssvdgr rkhkqpalta dfvnyylern mrmiqiqenm aeqknikdkl
      601 eneqeklhve ynklceslee lqnmngklrn egqgiwallg riigqklnip ailrapkerk
      661 pskkeggtqk astlpavlys cgickknhdq hllllcdtck lhyhlgcldp pltrmprktk
      721 nsywqcsecd qagssdmead iametlpdgt krsrrqikep vkfvpqdvpt epkkipirnt
      781 rtrgrkrsfv peeekpeeri prerrqrqsv lqkkpksedl rtecatckgt gdnenlvryp
      841 s
//
LOCUS       XP_041322518             636 aa            linear   VRT 06-MAY-2021
DEFINITION  late secretory pathway protein AVL9 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322518
VERSION     XP_041322518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..636
                     /product="late secretory pathway protein AVL9 homolog"
                     /calculated_mol_wt=70191
     Region          7..515
                     /region_name="Avl9"
                     /note="Transport protein Avl9; pfam09794"
                     /db_xref="CDD:430832"
     CDS             1..636
                     /gene="AVL9"
                     /coded_by="XM_041466584.1:53..1963"
                     /db_xref="GeneID:121353058"
ORIGIN      
        1 mekrgpvlhi vvvgfhhkkg cqvefsyppl kpgeghdshs lpeewkylpf lalpdgahny
       61 qedtvffhlp prcgdrttvy gvscyrqiea kalkvrqadi tretvqksvc vlsqlplygl
      121 lqaklqlith ayfeekdfsq isilkelydh mnsslgntsl egsqvylgls prdlvlhfrh
      181 kvlilfklil lekkvlfyis pvnrlvgalm tvlslfpgmi ehglsdcsqy rprksiseda
      241 glqenppqld dyvsvsaaea enanlgmgkg drkmtgdnsl egqkanvpfs qaektcngaq
      301 ssngtvqrlk vpsraspass esdwetldps ileesnlkeg erenaaseqa gdvrskgvss
      361 eglpitvqpq antghtvlvq glvsgleedq ygmplaiftk gylclpymal qqhhllsdvt
      421 vrgfvagatn ilfrqqkhls daiveiedaq vqihdpelrk ilnpttadlr fsdylvkhvt
      481 enrddvfldg tgweggdewi raqfsaylha llaavlqpdn ekilsdfgtg fvtawknthn
      541 yrvwnsnkhp alaevnsshp fqgqysvsdv klrlshsvqn sergkkignv mvstsrnvvq
      601 tgkavgqsvg gaftsaksam sswfstfths tqslgd
//
LOCUS       XP_041322519             200 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 4A [Pyrgilauda ruficollis].
ACCESSION   XP_041322519
VERSION     XP_041322519.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466585.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="ADP-ribosylation factor-like protein 4A"
                     /calculated_mol_wt=22529
     Region          18..200
                     /region_name="Arl4_Arl7"
                     /note="Arf-like 4 (Arl4) and 7 (Arl7) GTPases; cd04152"
                     /db_xref="CDD:206719"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206719"
     Site            order(29..35,50..51,78,134..135,137,168..170)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206719"
     Site            order(29..30,34,38,50..57,84,89)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206719"
     Site            39..54
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206719"
     Site            order(51..55,60,75,79,85,87..89)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206719"
     Site            51
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206719"
     Site            order(52..59,74,85,88..89)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206719"
     Site            order(55..67,69..74)
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206719"
     Site            75..92
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206719"
     Site            75..78
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206719"
     Site            134..137
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206719"
     Site            168..170
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206719"
     Site            order(188..191,197..200)
                     /site_type="active"
                     /note="putative nuclear localization signal [active]"
                     /db_xref="CDD:206719"
     CDS             1..200
                     /gene="ARL4A"
                     /coded_by="XM_041466585.1:203..805"
                     /db_xref="GeneID:121353059"
ORIGIN      
        1 mgnglsdqtp ilsslpsfqs fhivilgldc agkttvlyrl qfnefvntvp tkgfntekik
       61 vtlgnsktvt fhfwdvggqe klrplwksyt rctdgivfvv dsvdvermee aktelhkitr
      121 isenqgvpvl iiankqdlrn slslseiekm lamselssst pwhlqptcai igdglkegle
      181 klhdmiikrr kmlrqqkkkr
//
LOCUS       XP_041322520             200 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 4A [Pyrgilauda ruficollis].
ACCESSION   XP_041322520
VERSION     XP_041322520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="ADP-ribosylation factor-like protein 4A"
                     /calculated_mol_wt=22529
     Region          18..200
                     /region_name="Arl4_Arl7"
                     /note="Arf-like 4 (Arl4) and 7 (Arl7) GTPases; cd04152"
                     /db_xref="CDD:206719"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206719"
     Site            order(29..35,50..51,78,134..135,137,168..170)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206719"
     Site            order(29..30,34,38,50..57,84,89)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206719"
     Site            39..54
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206719"
     Site            order(51..55,60,75,79,85,87..89)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206719"
     Site            51
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206719"
     Site            order(52..59,74,85,88..89)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206719"
     Site            order(55..67,69..74)
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206719"
     Site            75..92
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206719"
     Site            75..78
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206719"
     Site            134..137
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206719"
     Site            168..170
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206719"
     Site            order(188..191,197..200)
                     /site_type="active"
                     /note="putative nuclear localization signal [active]"
                     /db_xref="CDD:206719"
     CDS             1..200
                     /gene="ARL4A"
                     /coded_by="XM_041466586.1:233..835"
                     /db_xref="GeneID:121353059"
ORIGIN      
        1 mgnglsdqtp ilsslpsfqs fhivilgldc agkttvlyrl qfnefvntvp tkgfntekik
       61 vtlgnsktvt fhfwdvggqe klrplwksyt rctdgivfvv dsvdvermee aktelhkitr
      121 isenqgvpvl iiankqdlrn slslseiekm lamselssst pwhlqptcai igdglkegle
      181 klhdmiikrr kmlrqqkkkr
//
LOCUS       XP_041322521             749 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA mismatch repair protein Mlh1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322521
VERSION     XP_041322521.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466587.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..749
                     /product="DNA mismatch repair protein Mlh1 isoform X1"
                     /calculated_mol_wt=83682
     Region          3..312
                     /region_name="mutl"
                     /note="DNA mismatch repair protein MutL; TIGR00585"
                     /db_xref="CDD:273155"
     Region          495..749
                     /region_name="Mlh1_C"
                     /note="DNA mismatch repair protein Mlh1 C-terminus;
                     pfam16413"
                     /db_xref="CDD:465109"
     CDS             1..749
                     /gene="MLH1"
                     /coded_by="XM_041466587.1:50..2299"
                     /db_xref="GeneID:121353060"
ORIGIN      
        1 magvirrlde avvnriaage viqrpanaik emiencldak stsiqvvvke gglkfiqvqd
       61 ngcgirkedl divcerftts klqkfedlas istygfrgea lasishvahv tvttktadak
      121 cafratysdg kikappkpca gnqgtqitve dlfynvntrr kalknpneey akilevvsry
      181 aihnsgisfs vkkqgdtvsd vrtlsnastv dniraifgna vsrelievgc edanlafkmk
      241 gyitnanysv kkcifllfin hrlvesaamr kaietvyaay lpksthpfly lsleiapqnv
      301 dvnvhptkhe vhflhedsil ervqqhvesk llgsnssrmy ftqtllpgad csssevvksa
      361 anssvvtkgg sdkvyahqmv rtdsreqkld aflqpvsnpl sagstevtte vnagppegae
      421 rpqdaemeev sdlvemvdvq edavkpggps esgrlspetv psrkrpredm dvesekddtr
      481 kdmtaactpr rriinltsvl tlqeeisnqa haklqemlhe hsfvgcvspq walaqyqtkl
      541 yllnttklsq elfyqiliyd fanfgvlrls epaplyelsm laledpesgw teedgpkegl
      601 aeyiveflkk ktemlkdyfs leideegnlt glpllidnyv ppleglpmfi lrlatevnwd
      661 eekecfesls kelamfysir kqyiieesnp tnsqseeses gsttwkwtve hvlykafrth
      721 llppkhfaed gnilqlanlp dlykvferc
//
LOCUS       XP_041322522             466 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA mismatch repair protein Mlh1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322522
VERSION     XP_041322522.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466588.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..466
                     /product="DNA mismatch repair protein Mlh1 isoform X2"
                     /calculated_mol_wt=52663
     Region          <3..>153
                     /region_name="mutL"
                     /note="DNA mismatch repair endonuclease MutL; PRK00095"
                     /db_xref="CDD:234630"
     Region          <10..49
                     /region_name="TopoII_MutL_Trans"
                     /note="MutL_Trans: transducer domain, having a ribosomal
                     S5 domain 2-like fold, conserved in the C-terminal domain
                     of type II DNA topoisomerases (Topo II) and DNA mismatch
                     repair (MutL/MLH1/PMS2) proteins. This transducer domain
                     is homologous to the second...; cl02783"
                     /db_xref="CDD:445919"
     Site            25
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:239565"
     Region          212..466
                     /region_name="Mlh1_C"
                     /note="DNA mismatch repair protein Mlh1 C-terminus;
                     pfam16413"
                     /db_xref="CDD:465109"
     CDS             1..466
                     /gene="MLH1"
                     /coded_by="XM_041466588.1:177..1577"
                     /db_xref="GeneID:121353060"
ORIGIN      
        1 myiftlhkpl eiapqnvdvn vhptkhevhf lhedsilerv qqhveskllg snssrmyftq
       61 tllpgadcss sevvksaans svvtkggsdk vyahqmvrtd sreqkldafl qpvsnplsag
      121 stevttevna gppegaerpq daemeevsdl vemvdvqeda vkpggpsesg rlspetvpsr
      181 krpredmdve sekddtrkdm taactprrri inltsvltlq eeisnqahak lqemlhehsf
      241 vgcvspqwal aqyqtklyll nttklsqelf yqiliydfan fgvlrlsepa plyelsmlal
      301 edpesgwtee dgpkeglaey iveflkkkte mlkdyfslei deegnltglp llidnyvppl
      361 eglpmfilrl atevnwdeek ecfeslskel amfysirkqy iieesnptns qseesesgst
      421 twkwtvehvl ykafrthllp pkhfaedgni lqlanlpdly kvferc
//
LOCUS       XP_041322523             296 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein SA [Pyrgilauda ruficollis].
ACCESSION   XP_041322523
VERSION     XP_041322523.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466589.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="40S ribosomal protein SA"
                     /calculated_mol_wt=32860
     Region          1..252
                     /region_name="PTZ00254"
                     /note="40S ribosomal protein SA; Provisional"
                     /db_xref="CDD:240331"
     CDS             1..296
                     /gene="RPSA"
                     /coded_by="XM_041466589.1:100..990"
                     /db_xref="GeneID:121353061"
ORIGIN      
        1 msggldvlqm keedvlkfla agthlggtnl dfqmeqyiyk rksdgiyiin lkrtweklll
       61 aaraivaien padvsvissr ntgqravlkf aaatgatpia grftpgtftn qiqaafrepr
      121 llvvtdprad hqplteasyv niptialcnt dsplryvdia ipcnnkgahs vglmwwmlar
      181 evlrmrgtis rehpwevmpd lyfyrdpeei ekeeqaaaek avtkeefqte wtapapefta
      241 ppqpevadws egvqvpsvpi qqfptedwsa qpatedwsaa ptaqatewvg tatews
//
LOCUS       XP_041322524             372 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: mitochondrial glycine transporter [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322524
VERSION     XP_041322524.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466590.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="LOW QUALITY PROTEIN: mitochondrial glycine
                     transporter"
                     /calculated_mol_wt=39843
     Region          94..184
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          188..273
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          285..372
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..372
                     /gene="SLC25A38"
                     /coded_by="XM_041466590.1:169..1287"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121353062"
ORIGIN      
        1 msksrhkpai rgqtrlegnr lgpagrrspr aeaergrggr rvtgaacagr ggaaxrgwlg
       61 pepgwlgaap rrcpprsgav ggagmpgrea emhpvlkafv cgsisgtcst llfqpldllk
      121 trlqtlqpav ngtgragmvt llfrvvrtes ilglwkgvsp sfarcipgvg iyfstlyvmk
      181 qkflvdrspt avesvflgaa aravsgicml pvtvvktrye sgrfgygsvy galksiyqte
      241 gargmfsglt atllrdapfs giylmfytqt knltpqdqld pvvvpllnfg cgifagilas
      301 latqpadvik thmqlspqky hrtsqaiafi ykdfglvgff rggvprvlrr tlmaamawtv
      361 yeqmmekmgl ks
//
LOCUS       XP_041322525             338 aa            linear   VRT 06-MAY-2021
DEFINITION  src kinase-associated phosphoprotein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322525
VERSION     XP_041322525.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466591.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..338
                     /product="src kinase-associated phosphoprotein 2"
                     /calculated_mol_wt=38481
     Region          110..215
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          280..332
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(285,287,290,294,314..315,328,330..331)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212978"
     CDS             1..338
                     /gene="SKAP2"
                     /coded_by="XM_041466591.1:227..1243"
                     /db_xref="GeneID:121353063"
ORIGIN      
        1 msdapavpgd vcslladiet fvsqtlkgen lskkakegre vllkkmkaik asypqefpek
       61 eledeeesen slssppdnvs iasdrydked egpsdgnqfp pvaaqdlqfv lkagylekrr
      121 kdhsflgfew qkrwcaiskt vfyyygsdkd kqqkgefale gytirmnnsl rkdakkdccf
      181 eisapdkriy qftaatpkea eewvqqvkfv iqdtgsnaip eeeeeeyddv gqanseptdd
      241 siyeevkeer lsseaevssn esqeevttds dnenidyany yqglwdctgd asdeltfkrg
      301 dviyiiskey nrfgwwvgem kgtiglvpkd ylmemydi
//
LOCUS       XP_041322526             290 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein DLX-5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322526
VERSION     XP_041322526.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466592.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..290
                     /product="homeobox protein DLX-5"
                     /calculated_mol_wt=31639
     Region          32..118
                     /region_name="DLL_N"
                     /note="Homeobox protein distal-less-like N terminal;
                     pfam12413"
                     /db_xref="CDD:463567"
     Region          138..194
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..290
                     /gene="DLX5"
                     /coded_by="XM_041466592.1:1..873"
                     /db_xref="GeneID:121353065"
ORIGIN      
        1 mtgvfdrrvp nirsgdfqap fqtaaamhhp sqesptlpes satdsdyysp aggaphgycs
       61 ptsasygkal npyqyqyhgm ngsagnypak ayadysyasp yhqysgaynr vqssasqpek
      121 evaepevrmv ngkpkkvrkp rtiyssfqla alqrrfqktq ylalperael aaslgltqtq
      181 vkiwfqnkrs kikkimknge mppehspsss dpmacnspqs pavwepqgss rslshhahsh
      241 ahppnsnpsp assylensts wypaansiss hlqphgslqh plalasgtiy
//
LOCUS       XP_041322527             373 aa            linear   VRT 06-MAY-2021
DEFINITION  neuropeptide S receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041322527
VERSION     XP_041322527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466593.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="neuropeptide S receptor"
                     /calculated_mol_wt=42469
     Region          50..341
                     /region_name="7tmA_NPSR"
                     /note="neuropeptide S receptor, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15197"
                     /db_xref="CDD:320325"
     Region          51..77
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320325"
     Region          83..110
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320325"
     Site            order(106,109..110,121..126,128..129,132,175,177..181,207,
                     210..212,214..216,218..219,288,291..292,294..295,298,
                     309..310,312..314,317,320..321)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320325"
     Region          121..151
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320325"
     Region          162..183
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320325"
     Region          207..236
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320325"
     Region          268..298
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320325"
     Region          310..335
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320325"
     CDS             1..373
                     /gene="NPSR1"
                     /coded_by="XM_041466593.1:1..1122"
                     /db_xref="GeneID:121353066"
ORIGIN      
        1 mevnsteass ssqggtgcld lplvtftetv tftevvaeee wgsfyysfkt eqlvtlwilf
       61 ivtiagnaiv lfstwrrkrk srmtyfvtql aitdsftgli nimtdiiwry tgdfmapdiv
      121 crvvryfqvv llyastyvlv slsidryhai vypmkflqge rqakvligva wslsflfsip
      181 tliifgkrql sngevqcwal wpddsywipy mtvvaflvyf ipliiisviy sivirtiwmk
      241 skaqaviiss cpggktsrgy ssrgfisrak vkaikysivi ilafilcwsp yflfdildnf
      301 nilpetkerf yasviiqnlp alnsavnpli ycffsnslcp pseerrtqrl ggtfrersdg
      361 gqemqvlskp eyi
//
LOCUS       XP_041322528             472 aa            linear   VRT 06-MAY-2021
DEFINITION  metalloreductase STEAP4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322528
VERSION     XP_041322528.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466594.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="metalloreductase STEAP4"
                     /calculated_mol_wt=52791
     Region          24..190
                     /region_name="COG2085"
                     /note="Predicted dinucleotide-binding enzyme [General
                     function prediction only]"
                     /db_xref="CDD:441688"
     Region          249..394
                     /region_name="Ferric_reduct"
                     /note="Ferric reductase like transmembrane component;
                     pfam01794"
                     /db_xref="CDD:426438"
     CDS             1..472
                     /gene="STEAP4"
                     /coded_by="XM_041466594.1:1..1419"
                     /db_xref="GeneID:121353067"
ORIGIN      
        1 mnknssntma laantsnkre tvcifgtgdf gralghkmiq sgypvvygsr stqisnlipk
       61 daevlghaea aqkaaviiia iqrqhynflt plaevlrgkv lvdisnnlkl nqypesnaey
      121 laqllpgskv vkafntvsaw alqsgtldas rqvfvcgddv eakqmvmniv ralgltpldk
      181 gsllaaqeie nyplqlfpmw kfpiflslgl taffffycva ldiiytyiye nnnfsffiai
      241 tipnrvcpvm alillalvyl pgifaaiiql yrgtkyrrfp dwldkwmlcr kqlglialaf
      301 aslhavftlv tplrafaswr tgkgiisqvl nnktepldht nawlsdsyla lgilgfflfv
      361 llgitslpsv snnvnwrefr fvqsklgyla lilctahtlv yggkwflsps aykwylpdiy
      421 ilslivpcav lvvkfvlifp cvdkpltqir qgwernpkys eqsnyiinks av
//
LOCUS       XP_041322529             306 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A13 [Pyrgilauda ruficollis].
ACCESSION   XP_041322529
VERSION     XP_041322529.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466595.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="homeobox protein Hox-A13"
                     /calculated_mol_wt=33643
     Region          27..147
                     /region_name="HoxA13_N"
                     /note="Hox protein A13 N terminal; pfam12284"
                     /db_xref="CDD:463521"
     Region          241..297
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..306
                     /gene="HOXA13"
                     /coded_by="XM_041466595.1:53..973"
                     /db_xref="GeneID:121353068"
ORIGIN      
        1 mtasvllhpr wiepvmflyd nsldeinknm dgfhagsnfa aaaaaanpcr nlmahpapla
       61 apsaaaysss eapaagmaep tvkqcspcsa avqsssgaal pygyfgsgyy pcrmthhnai
      121 kscaqpastf adkymdtsvs geeftsrake fafyqgyaag pyqpvpgyld mpvvpaiggp
      181 geprhdpllp mdsyqpwait ngwngqvycp keqsqpphlw kstlpdvvsh psdansyrrg
      241 rkkrvpytkv qlkelereya tnkfitkdkr rrisattnls erqvtiwfqn rrvkekkvin
      301 klktts
//
LOCUS       XP_041322530             904 aa            linear   VRT 06-MAY-2021
DEFINITION  probable leucine--tRNA ligase, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322530
VERSION     XP_041322530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..904
                     /product="probable leucine--tRNA ligase, mitochondrial"
                     /calculated_mol_wt=103103
     Region          78..888
                     /region_name="LeuS"
                     /note="Leucyl-tRNA synthetase [Translation, ribosomal
                     structure and biogenesis]; COG0495"
                     /db_xref="CDD:440261"
     CDS             1..904
                     /gene="LARS2"
                     /coded_by="XM_041466596.1:93..2807"
                     /db_xref="GeneID:121353069"
ORIGIN      
        1 mqsvyqrvgp cssclkrqln gflglnkwqr rvvpacvrti ysetgkwekn ygletrkrve
       61 nwwfprikdq fcrisetdks rpkfyvlsmf pypsgklhmg hvrvytisda varfqkmrgm
      121 qvinpmgwda fglpaenaav ehglhpaswt qsniqhmrkq fdalglsftw erevttclpe
      181 yykwtqylfl klfeagivyq kealvnwdpv dqtvlaneqv ddngcswrsg akveqkylkq
      241 wfikttayak amfdalsdlp ewygikemqa nwigdcigcs ldfllkvngk vteeklaayt
      301 ytpeaiygas hlyilpthrl lhgnsslkev lqrefipgkd sltsvtavnl ltnqeipvvi
      361 saktnfdnyl dtkigipsts aedaavaknl gisfteviet lpdglekvin saeitgmtrq
      421 ealktitqqa knkriggdlt sdklrdwlis rqrywgtpip iihcqacgav pvpyehlpvv
      481 lpnvttftgk gasplesase wvncscprck aaarreadtm dtfvdsawyy lrytdphntd
      541 rpfnsdlady wmpvdlyigg kehavmhlfy arffshfchd lkmtkhkepf hkllvqglik
      601 nqtfrltttg qclkreevdl tgsepvhlkt geklqvawek mskskyngid peeivkeygi
      661 dtlrlyilfa appeqdilwd aktdampgvq rwqvrlwalv tkvieartsg tmpnpellnk
      721 kekaearkiw eqknlvisev teyftkdhlf naaisrlmsl tnvlhhaprp lvlhstefed
      781 alaslcimva pmaphiasem wkglshmqnk lcthhhwdvd vllqswpkvd pdylqpsdvv
      841 emsvlinnka cgkvfvpqqa arnfeevhel vlqselgvkh lqgraikkaf lsprtalinf
      901 lvqe
//
LOCUS       XP_041322531             559 aa            linear   VRT 06-MAY-2021
DEFINITION  inhibin beta A chain isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322531
VERSION     XP_041322531.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466597.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="inhibin beta A chain isoform X1"
                     /calculated_mol_wt=62333
     Region          191..371
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Region          452..559
                     /region_name="TGF_beta_INHBA"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in inhibin beta A chain (INHBA) and similar
                     proteins; cd19404"
                     /db_xref="CDD:381674"
     Site            order(460,473,475,479,530,533..535,537,543,545,547,554)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381674"
     Site            order(522..523,525,546,549..550,559)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381674"
     CDS             1..559
                     /gene="INHBA"
                     /coded_by="XM_041466597.1:1..1680"
                     /db_xref="GeneID:121353070"
ORIGIN      
        1 msirkpaclf lplpnhslys qtklppslih sltlgqsvls lslplsvsls yseteselfs
       61 ltatniysty ciqrgnlqtk lhrkllvlvp enllkrrknk qtnkqtkpap kktvregggk
      121 agpfkkgitt tfaarmpllw krgfllvlcw iivrssptpg seghssvtdc pscalatlsk
      181 dvpssqpemv eavkkhilnm lhlrdrpnit qpvpkaalln aikklhvgkv gedgyveied
      241 dvgrraemne vveqtseiit faesgtakkm lhfeiskegs elsvvehaev wlflkvskan
      301 rsrtkvtirl fqqqrqpkgn segaedtedg glkgeksetl isekavdtrk stwhifpvss
      361 svqrlldqgk ssldvriacd lcqetganlv llgkkkkked dgegkekeag eftgeeekeq
      421 shrpflmmla rhsedrqhrr rrrglecdgk vnicckkqff vsfkdigwsd wiiaptgyha
      481 nycegecpsh iagtsgssls fhstvinhyr mrghspfanl ksccvptklr pmsmlyyddg
      541 qniikkdiqn miveecgcs
//
LOCUS       XP_041322532             424 aa            linear   VRT 06-MAY-2021
DEFINITION  inhibin beta A chain isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322532
VERSION     XP_041322532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466598.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="inhibin beta A chain isoform X2"
                     /calculated_mol_wt=47387
     Region          56..236
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Region          317..424
                     /region_name="TGF_beta_INHBA"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in inhibin beta A chain (INHBA) and similar
                     proteins; cd19404"
                     /db_xref="CDD:381674"
     Site            order(325,338,340,344,395,398..400,402,408,410,412,419)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381674"
     Site            order(387..388,390,411,414..415,424)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381674"
     CDS             1..424
                     /gene="INHBA"
                     /coded_by="XM_041466598.1:200..1474"
                     /db_xref="GeneID:121353070"
ORIGIN      
        1 mpllwkrgfl lvlcwiivrs sptpgseghs svtdcpscal atlskdvpss qpemveavkk
       61 hilnmlhlrd rpnitqpvpk aallnaikkl hvgkvgedgy veieddvgrr aemnevveqt
      121 seiitfaesg takkmlhfei skegselsvv ehaevwlflk vskanrsrtk vtirlfqqqr
      181 qpkgnsegae dtedgglkge ksetliseka vdtrkstwhi fpvsssvqrl ldqgkssldv
      241 riacdlcqet ganlvllgkk kkkeddgegk ekeageftge eekeqshrpf lmmlarhsed
      301 rqhrrrrrgl ecdgkvnicc kkqffvsfkd igwsdwiiap tgyhanyceg ecpshiagts
      361 gsslsfhstv inhyrmrghs pfanlksccv ptklrpmsml yyddgqniik kdiqnmivee
      421 cgcs
//
LOCUS       XP_041322533             662 aa            linear   VRT 06-MAY-2021
DEFINITION  eomesodermin homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322533
VERSION     XP_041322533.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466599.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..662
                     /product="eomesodermin homolog"
                     /calculated_mol_wt=71223
     Region          <66..221
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          224..414
                     /region_name="T-box_TBR2"
                     /note="DNA-binding domain of T-box brain protein 2 and
                     related T-box proteins; cd20205"
                     /db_xref="CDD:410331"
     Site            order(252..253,286,288,331,334,350..351,391,393,399,402,
                     406..408,411..412)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410331"
     Site            order(270,272,305..307,313..314,344,363,377)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:410331"
     Region          440..659
                     /region_name="T-box_assoc"
                     /note="T-box transcription factor-associated; pfam16176"
                     /db_xref="CDD:465042"
     CDS             1..662
                     /gene="EOMES"
                     /coded_by="XM_041466599.1:41..2029"
                     /db_xref="GeneID:121353074"
ORIGIN      
        1 mqlgeplvta agplpgapfy plegggrtga vgagagtgaa ggsrgppgsg spshldldkm
       61 pkkfgaapai lgeaeavepp faapkpdgrk atpcgdeelp paaaarysmd slsperyylq
      121 spgppaadlg gpcalfpypp aaqhgavyqp pggprypygs vlspggfagt vcppggrtqf
      181 gggggyqygq atgggplygp yppasgscgg lgalgvpaag pgmraqvflc nrplwlkfhr
      241 hqtemiitkq grrmfpflsf nitglnptah ynvfvevvla dpnhwrfqgg kwvtcgkadn
      301 nmqgnkvyvh pespntgahw mrqeisfgkl kltnnkgann nnaqmivlqs lhkyqprlhi
      361 vevtedgved lndssktqtf ifpetqfiav tayqntditq lkidhnpfak gfrdnydsmy
      421 tasendrltp sptdsprshq ivpgarysvq pffqeqfvnn lpparfynge rtvpqtngll
      481 spqqneevas spqrwfvtpv qqpnankldm nsyeteyshs tllpygiksl plqtshalgy
      541 ypdptfpsma gwgsrgsyqr kmttgltwps rtsppgfted qlskdkvkee igsswietpp
      601 siksldsnds gvytgackrr rlspstssne nsptmkcedi naedynkdts kgmgyyafya
      661 ss
//
LOCUS       XP_041322534             339 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L3, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041322534
VERSION     XP_041322534.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466600.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="39S ribosomal protein L3, mitochondrial"
                     /calculated_mol_wt=37692
     Region          47..326
                     /region_name="Ribosomal_L3"
                     /note="Ribosomal protein L3; cl46849"
                     /db_xref="CDD:481189"
     CDS             1..339
                     /gene="MRPL3"
                     /coded_by="XM_041466600.1:26..1045"
                     /db_xref="GeneID:121353075"
ORIGIN      
        1 magwgrlarl ggrlwaaaap apghrgqlgf vvrhinsstw whehlseenv eflkkitaee
       61 ykaqtasklc plkdepwpln kwtpdsirvg vvaiklgmmp iwtksgekha vtllkvqdch
      121 vlryvskees ggktakllvg gknvspfskr esaheifkea gvprkqkvtt fnvtddaiik
      181 pgtplyaahf rpgqfvdvta ktigkgfqgv mkrwgfkgqp ashgqtkthr rpgaistnka
      241 akvyrgkkmp gkmgniyrts fglkvwrint khdiiyvngs vpghtnclvk vrdsklptyk
      301 dcnknppfpt ffadgdeelp edlfdeeifq ftdpsvtfa
//
LOCUS       XP_041322535             460 aa            linear   VRT 06-MAY-2021
DEFINITION  HEPACAM family member 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322535
VERSION     XP_041322535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..460
                     /product="HEPACAM family member 2"
                     /calculated_mol_wt=51070
     Region          33..125
                     /region_name="V-set"
                     /note="Immunoglobulin V-set domain; pfam07686"
                     /db_xref="CDD:462230"
     Region          145..220
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          254..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          263..267
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          276..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          322..325
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..460
                     /gene="HEPACAM2"
                     /coded_by="XM_041466601.1:1..1383"
                     /db_xref="GeneID:121353076"
ORIGIN      
        1 mlswsplasf fwdlqckiyf llvgicsalk ltvpshtihg iegqplhlsv dynfsatase
       61 vqiiwlfers qsnpkyllgs vnqrvvpdle yqdkftlmpp naslrinplh lsdegnyivk
      121 vnvrgngtia asqkiqvavd vpvtkptvht epssgvveyv gnitlkctvn rgtriayqwm
      181 kngkrlhasp nyifssnnat llivpavked ignysclvsn pvsameseii vptiyygpyg
      241 lrvksdkgln igavftvdmg evvlfdcsad snppntyswi qrddnntqvi kygphlevvs
      301 dnvaqktmdy mccafnnvtg krdethftvv vmsvglekla qkgkslssla vitgislfli
      361 lamaflflwk ryqphkviqq klqsraetdy rkaqafsghe salddfgiye fitfpdltsg
      421 srvssqsvpg pdfvagqdml stvyeviqhi peqpeqdyqq
//
LOCUS       XP_041322536             837 aa            linear   VRT 06-MAY-2021
DEFINITION  CUB domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322536
VERSION     XP_041322536.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466602.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..837
                     /product="CUB domain-containing protein 1"
                     /calculated_mol_wt=93120
     Region          219..>296
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cl00049"
                     /db_xref="CDD:412131"
     CDS             1..837
                     /gene="CDCP1"
                     /coded_by="XM_041466602.1:54..2567"
                     /db_xref="GeneID:121353077"
ORIGIN      
        1 maagralaal laallaasaq llpreasfti slhkadnttv tiklkpvlpl scrirvknvf
       61 mselkikpgd nvtftftcst pekyfiaeiq knidcvsgpc pfgdvhlypp glprlnrtyi
      121 wdvkastkag lelkfstswl rqiepgetcp dsvsyninsc idkamvnigt fcrngsvsri
      181 kllggvvmsl hlpwhlpltt sgfnianras ikrlciiesi lkgessitlm spnyplgfpe
      241 delmtwqfvi ppnmrasvff lnyslsncer keerveyyip gspsnpevfr lsdsqpanma
      301 gsfnmslqgc dqdaqnpgil rllfqvivqh pqvdenvthl vdlskeknmt vtihlegwls
      361 hiplmsepic lickdprscd rvltltsgav yrisflckdl srlritaekv igcmdirwcq
      421 kkiyslsvpk aitrlpirlh kfiwkllatd minieimsps lklqqhvseq rcnmsysysi
      481 vsatpeteln vgvfcpggsi ekiqmrnnis islktfgkgf inesipqdlk msfvphikde
      541 ciftvspdpk akvylqtpnw pyglppyvsi swliavpskq tarlgfskdr mgiacetgra
      601 yvnikeetlg aeeivrrede llpqprnmlh nfwvnvsncr pvdktqltlq fwvtladkqi
      661 dlgiilavva gagvltvigl tvccvkkkkk kaqnpmvgvy ndnvntqmpg kkglfgkgrq
      721 nneshvyavi ddavvyghll kesngsvspe vdvyrpfdgp vgslppsppp fsfrkdikrs
      781 snteeeplpl adtdqdtytf ahqksgqsed ngdankkdkg dtsvpllenk erdglve
//
LOCUS       XP_041322537             540 aa            linear   VRT 06-MAY-2021
DEFINITION  MAGUK p55 subfamily member 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322537
VERSION     XP_041322537.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466603.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..540
                     /product="MAGUK p55 subfamily member 6 isoform X1"
                     /calculated_mol_wt=60993
     Region          2..55
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          57..108
                     /region_name="L27"
                     /note="L27 domain; pfam02828"
                     /db_xref="CDD:460717"
     Region          129..207
                     /region_name="PDZ_MPP6-MPP2-like"
                     /note="PDZ domain of membrane palmitoylated protein 6
                     (MPP6), MPP2, and related domains; cd10832"
                     /db_xref="CDD:467268"
     Site            order(140..146,155,158,187,191,194..195)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467268"
     Region          219..279
                     /region_name="SH3_MPP6"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 6 (or MAGUK p55 subfamily member 6);
                     cd12038"
                     /db_xref="CDD:212971"
     Site            order(221,245..246)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212971"
     Site            order(224,226,229,240,258..259,275,277..278)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212971"
     Region          337..525
                     /region_name="Guanylate_kin"
                     /note="Guanylate kinase; pfam00625"
                     /db_xref="CDD:395500"
     CDS             1..540
                     /gene="PALS2"
                     /coded_by="XM_041466603.1:125..1747"
                     /db_xref="GeneID:121353078"
ORIGIN      
        1 mqqvldnltd lptstgaeei dliflkgime npivrslaka herledskle avsdnnlelv
       61 neiledispl vnkdenvael vgilkephfq slleahdiva skcydsppss pevnnssvnn
      121 qvvpvdairi lgihkragep lgvtfrvenn dlviarilhg gmidrqgllh vgdiikevng
      181 hevgnnpkel qellknisgs vtlkilpsyr dtvipqqvfv kchfdynpyn dnlipckeag
      241 lkfskgeilq ivnredpnww qashvkeggs aglipsqfle ekrkafvrrd wdnsgpfcgt
      301 isskkkkkmm ylttrnaefd rheiqiyeev akmppfqrkt lvligaqgvg rrslknrfiv
      361 lnptrfgttv pftsrkprdd ekdgqayrfv sraemetdik agrylehgey egnlygtkid
      421 silevvqtgr tcildvnpqa lkilrtsefm pyvvfiaape letlramhka vvdagittkl
      481 ltdtdlkktv desariqray nhyfdltivn dnldkafekl qtaierlrle pqwvpiswvy
//
LOCUS       XP_041322538             540 aa            linear   VRT 06-MAY-2021
DEFINITION  MAGUK p55 subfamily member 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322538
VERSION     XP_041322538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466604.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..540
                     /product="MAGUK p55 subfamily member 6 isoform X1"
                     /calculated_mol_wt=60993
     Region          2..55
                     /region_name="L27"
                     /note="domain in receptor targeting proteins Lin-2 and
                     Lin-7; smart00569"
                     /db_xref="CDD:197794"
     Region          57..108
                     /region_name="L27"
                     /note="L27 domain; pfam02828"
                     /db_xref="CDD:460717"
     Region          129..207
                     /region_name="PDZ_MPP6-MPP2-like"
                     /note="PDZ domain of membrane palmitoylated protein 6
                     (MPP6), MPP2, and related domains; cd10832"
                     /db_xref="CDD:467268"
     Site            order(140..146,155,158,187,191,194..195)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467268"
     Region          219..279
                     /region_name="SH3_MPP6"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 6 (or MAGUK p55 subfamily member 6);
                     cd12038"
                     /db_xref="CDD:212971"
     Site            order(221,245..246)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212971"
     Site            order(224,226,229,240,258..259,275,277..278)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212971"
     Region          337..525
                     /region_name="Guanylate_kin"
                     /note="Guanylate kinase; pfam00625"
                     /db_xref="CDD:395500"
     CDS             1..540
                     /gene="PALS2"
                     /coded_by="XM_041466604.1:127..1749"
                     /db_xref="GeneID:121353078"
ORIGIN      
        1 mqqvldnltd lptstgaeei dliflkgime npivrslaka herledskle avsdnnlelv
       61 neiledispl vnkdenvael vgilkephfq slleahdiva skcydsppss pevnnssvnn
      121 qvvpvdairi lgihkragep lgvtfrvenn dlviarilhg gmidrqgllh vgdiikevng
      181 hevgnnpkel qellknisgs vtlkilpsyr dtvipqqvfv kchfdynpyn dnlipckeag
      241 lkfskgeilq ivnredpnww qashvkeggs aglipsqfle ekrkafvrrd wdnsgpfcgt
      301 isskkkkkmm ylttrnaefd rheiqiyeev akmppfqrkt lvligaqgvg rrslknrfiv
      361 lnptrfgttv pftsrkprdd ekdgqayrfv sraemetdik agrylehgey egnlygtkid
      421 silevvqtgr tcildvnpqa lkilrtsefm pyvvfiaape letlramhka vvdagittkl
      481 ltdtdlkktv desariqray nhyfdltivn dnldkafekl qtaierlrle pqwvpiswvy
//
LOCUS       XP_041322539             472 aa            linear   VRT 06-MAY-2021
DEFINITION  MAGUK p55 subfamily member 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322539
VERSION     XP_041322539.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466605.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="MAGUK p55 subfamily member 6 isoform X2"
                     /calculated_mol_wt=53746
     Region          4..40
                     /region_name="L27"
                     /note="L27 domain; pfam02828"
                     /db_xref="CDD:460717"
     Region          61..139
                     /region_name="PDZ_MPP6-MPP2-like"
                     /note="PDZ domain of membrane palmitoylated protein 6
                     (MPP6), MPP2, and related domains; cd10832"
                     /db_xref="CDD:467268"
     Site            order(72..78,87,90,119,123,126..127)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467268"
     Region          151..211
                     /region_name="SH3_MPP6"
                     /note="Src Homology 3 domain of Membrane Protein,
                     Palmitoylated 6 (or MAGUK p55 subfamily member 6);
                     cd12038"
                     /db_xref="CDD:212971"
     Site            order(153,177..178)
                     /site_type="other"
                     /note="GuK domain interface [polypeptide binding]"
                     /db_xref="CDD:212971"
     Site            order(156,158,161,172,190..191,207,209..210)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212971"
     Region          269..457
                     /region_name="Guanylate_kin"
                     /note="Guanylate kinase; pfam00625"
                     /db_xref="CDD:395500"
     CDS             1..472
                     /gene="PALS2"
                     /coded_by="XM_041466605.1:68..1486"
                     /db_xref="GeneID:121353078"
ORIGIN      
        1 mkmlqnwley srslifrchl ftslleahdi vaskcydspp sspevnnssv nnqvvpvdai
       61 rilgihkrag eplgvtfrve nndlviaril hggmidrqgl lhvgdiikev nghevgnnpk
      121 elqellknis gsvtlkilps yrdtvipqqv fvkchfdynp yndnlipcke aglkfskgei
      181 lqivnredpn wwqashvkeg gsaglipsqf leekrkafvr rdwdnsgpfc gtisskkkkk
      241 mmylttrnae fdrheiqiye evakmppfqr ktlvligaqg vgrrslknrf ivlnptrfgt
      301 tvpftsrkpr ddekdgqayr fvsraemetd ikagrylehg eyegnlygtk idsilevvqt
      361 grtcildvnp qalkilrtse fmpyvvfiaa peletlramh kavvdagitt klltdtdlkk
      421 tvdesariqr aynhyfdlti vndnldkafe klqtaierlr lepqwvpisw vy
//
LOCUS       XP_041322540             141 aa            linear   VRT 06-MAY-2021
DEFINITION  UBAP1-MVB12-associated (UMA)-domain containing protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322540
VERSION     XP_041322540.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466606.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..141
                     /product="UBAP1-MVB12-associated (UMA)-domain containing
                     protein 1"
                     /calculated_mol_wt=15775
     CDS             1..141
                     /gene="UMAD1"
                     /coded_by="XM_041466606.1:144..569"
                     /db_xref="GeneID:121353080"
ORIGIN      
        1 mfsffrksqd skkvtvpere adgfvivgdt addqsrdskd ktsfpetrpm ysqpsqintg
       61 qrsqltvsst emgnqrsqtl esspfmsdll sdvpfalaph vlavqgthsd vpdrlltydi
      121 nenlsrfwyd ftlensvlcd p
//
LOCUS       XP_041322541             141 aa            linear   VRT 06-MAY-2021
DEFINITION  UBAP1-MVB12-associated (UMA)-domain containing protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322541
VERSION     XP_041322541.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466607.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..141
                     /product="UBAP1-MVB12-associated (UMA)-domain containing
                     protein 1"
                     /calculated_mol_wt=15775
     CDS             1..141
                     /gene="UMAD1"
                     /coded_by="XM_041466607.1:86..511"
                     /db_xref="GeneID:121353080"
ORIGIN      
        1 mfsffrksqd skkvtvpere adgfvivgdt addqsrdskd ktsfpetrpm ysqpsqintg
       61 qrsqltvsst emgnqrsqtl esspfmsdll sdvpfalaph vlavqgthsd vpdrlltydi
      121 nenlsrfwyd ftlensvlcd p
//
LOCUS       XP_041322542             141 aa            linear   VRT 06-MAY-2021
DEFINITION  UBAP1-MVB12-associated (UMA)-domain containing protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322542
VERSION     XP_041322542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..141
                     /product="UBAP1-MVB12-associated (UMA)-domain containing
                     protein 1"
                     /calculated_mol_wt=15775
     CDS             1..141
                     /gene="UMAD1"
                     /coded_by="XM_041466608.1:78..503"
                     /db_xref="GeneID:121353080"
ORIGIN      
        1 mfsffrksqd skkvtvpere adgfvivgdt addqsrdskd ktsfpetrpm ysqpsqintg
       61 qrsqltvsst emgnqrsqtl esspfmsdll sdvpfalaph vlavqgthsd vpdrlltydi
      121 nenlsrfwyd ftlensvlcd p
//
LOCUS       XP_041322543             121 aa            linear   VRT 06-MAY-2021
DEFINITION  replication protein A 14 kDa subunit [Pyrgilauda ruficollis].
ACCESSION   XP_041322543
VERSION     XP_041322543.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466609.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..121
                     /product="replication protein A 14 kDa subunit"
                     /calculated_mol_wt=13320
     Region          8..113
                     /region_name="RPA3"
                     /note="A subfamily of OB folds similar to human RPA3 (also
                     called RPA14). RPA3 is the smallest subunit of Replication
                     protein A (RPA). RPA is a nuclear ssDNA binding protein
                     (SSB) which appears to be involved in all aspects of DNA
                     metabolism including...; cd04479"
                     /db_xref="CDD:239925"
     Site            order(8..9,11,68,88,94..95,101,104,106,108..109,112..113)
                     /site_type="active"
                     /note="trimerization core interface [active]"
                     /db_xref="CDD:239925"
     Site            order(8..9,11,68,88,94..95,106,109,112..113)
                     /site_type="other"
                     /note="RPA3/RPA2 DBD-D interface [polypeptide binding]"
                     /db_xref="CDD:239925"
     Site            order(31..33,40..43,45,52..54,56,65,72..74,78..80)
                     /site_type="active"
                     /note="generic binding surface I [active]"
                     /db_xref="CDD:239925"
     Site            order(95,101,108)
                     /site_type="other"
                     /note="RPA3/RPA1 DBD-C interface [polypeptide binding]"
                     /db_xref="CDD:239925"
     CDS             1..121
                     /gene="RPA3"
                     /coded_by="XM_041466609.1:69..434"
                     /db_xref="GeneID:121353081"
ORIGIN      
        1 mgdihevprp riatgqlaqh igqpvcfvgr vekihpsgkl vvltdglgkh ttvelsepld
       61 eeisgvievv grvtnqatim casyvqfred kssfdlelyn ealkiihefp eyfpfgtgrn
      121 t
//
LOCUS       XP_041322544             370 aa            linear   VRT 06-MAY-2021
DEFINITION  CKLF-like MARVEL transmembrane domain-containing protein 6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322544
VERSION     XP_041322544.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466610.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="CKLF-like MARVEL transmembrane domain-containing
                     protein 6"
                     /calculated_mol_wt=41758
     CDS             1..370
                     /gene="CMTM6"
                     /coded_by="XM_041466610.1:130..1242"
                     /db_xref="GeneID:121353082"
ORIGIN      
        1 mgtvynqtre peasrrlpsf lsrffpdgsr rpapamenrt aynqtrepea srclppfflr
       61 ccpagnrqps parqnraayn qttepqasry lphfflrccp agnrqpspar qnraaynqtt
      121 epqasrylph fflrcfpagn rrpgptresg saykqtaere aktpcpppfc frffpagsrr
      181 pgpgmengav ynettepqak gprrrplgct lrrlrgwrlp vkvaqtifsf vavvceevvd
      241 ecitcsglyf feftscsafl lsllilyvyc tdfyeslged kvkklnfwav pvigawflla
      301 sivfsatcsd saaesaacvf gffatfafaa efgrdlyely rkrkqnidgr penprntpsa
      361 ienqplnkqr
//
LOCUS       XP_041322545             770 aa            linear   VRT 06-MAY-2021
DEFINITION  probable C-mannosyltransferase DPY19L1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322545
VERSION     XP_041322545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="probable C-mannosyltransferase DPY19L1"
                     /calculated_mol_wt=87217
     Region          115..765
                     /region_name="Dpy19"
                     /note="C-mannosyltransferase Dpy19; cl41786"
                     /db_xref="CDD:455131"
     Region          115..130
                     /region_name="putative TM segment 1"
                     /note="putative TM segment 1 [structural motif]"
                     /db_xref="CDD:439130"
     Region          250..271
                     /region_name="putative TM segment 2"
                     /note="putative TM segment 2 [structural motif]"
                     /db_xref="CDD:439130"
     Region          275..291
                     /region_name="putative TM segment 3"
                     /note="putative TM segment 3 [structural motif]"
                     /db_xref="CDD:439130"
     Region          311..325
                     /region_name="putative TM segment 4"
                     /note="putative TM segment 4 [structural motif]"
                     /db_xref="CDD:439130"
     Region          334..349
                     /region_name="putative TM segment 5"
                     /note="putative TM segment 5 [structural motif]"
                     /db_xref="CDD:439130"
     Region          355..373
                     /region_name="putative TM segment 6"
                     /note="putative TM segment 6 [structural motif]"
                     /db_xref="CDD:439130"
     Region          381..398
                     /region_name="putative TM segment 7"
                     /note="putative TM segment 7 [structural motif]"
                     /db_xref="CDD:439130"
     Region          401..417
                     /region_name="putative TM segment 8"
                     /note="putative TM segment 8 [structural motif]"
                     /db_xref="CDD:439130"
     Region          435..453
                     /region_name="putative TM segment 9"
                     /note="putative TM segment 9 [structural motif]"
                     /db_xref="CDD:439130"
     Region          505..526
                     /region_name="putative TM segment 10"
                     /note="putative TM segment 10 [structural motif]"
                     /db_xref="CDD:439130"
     Region          550..566
                     /region_name="putative TM segment 11"
                     /note="putative TM segment 11 [structural motif]"
                     /db_xref="CDD:439130"
     Region          570..592
                     /region_name="putative TM segment 12"
                     /note="putative TM segment 12 [structural motif]"
                     /db_xref="CDD:439130"
     Region          596..611
                     /region_name="putative TM segment 13"
                     /note="putative TM segment 13 [structural motif]"
                     /db_xref="CDD:439130"
     CDS             1..770
                     /gene="DPY19L1"
                     /coded_by="XM_041466611.1:189..2501"
                     /db_xref="GeneID:121353083"
ORIGIN      
        1 mvvpsrgrnk espplkpgqq qqqqqspgas psrgrwphsp grqgsggara mrkggggrrg
       61 argdprgpfr egpaadgerd vlgrgplsll rlcgdrlrvf vvdrkafitk vdsnvwltfl
      121 lavfagvlhw chittlfend rhfshlstle remafrtemg lyysyfkiii eapsfwsgvc
      181 aimndkltey plvintlqrf nlypevvlas wyriyttimd flgvptktcw tvnrgkglsp
      241 vesceglgdp asfyvavifl lngfmmslff iygtylsgsr lgglvtvlcf ffnhgectrv
      301 mwtpplresf sypflvmqml lltyilrips intgslialc vsniffmlpw qfaqfvlltq
      361 iaslfavcim gyidssklqk ilsahmvsll vcfilmfgns mlltsyyaas lvvisgilew
      421 spkvlkrrkr evyvwviegc awlfgtvtlk yltslvfgia ddahignilk skfigykdfd
      481 tlmytcaaef dfmeketpvr ytktlllpvv lvvfgviikr aikyilcsls htgryekeer
      541 fnhgelvfha lqllaysvla ilimrlklfl tphlcimasl vcskqlfgwl fykvqpktlv
      601 failalmtie gsanlrtqwn imgefsnlpq eellewiqvn trqdavfaga mptmasvkls
      661 tlrpivnhph yedaglrart kvvysmysrk pasqvkrdlm klgvnyyile eslcvsrkkp
      721 gcsmpeiwdv edpanrgkip lctlmskdsr pyfitvfens nyrvlkipke
//
LOCUS       XP_041322546             373 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: GTP-binding protein 10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322546
VERSION     XP_041322546.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466612.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="LOW QUALITY PROTEIN: GTP-binding protein 10"
                     /calculated_mol_wt=41333
     Region          12..350
                     /region_name="Obg"
                     /note="GTPase involved in cell partioning and DNA repair
                     [Cell cycle control, cell division, chromosome
                     partitioning, Replication, recombination, and repair];
                     COG0536"
                     /db_xref="CDD:440302"
     CDS             1..373
                     /gene="GTPBP10"
                     /coded_by="XM_041466612.1:1..1122"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121353086"
ORIGIN      
        1 mlkllfyxys nfiddlrvyv rggtggmgyp nlggeggrgg dvwfvarert tlksirekyp
       61 qkrfvagaga nssvkalkge kgkdcevhvp lgisvldddg kqigelnaag erflaahggl
      121 ggslatnflp ckgqrrtvhl dlkliadvgl vgfpnagkss llskishakp eianyaftti
      181 qpelgkimya dykqisvadl pgliegahan kgmghkflkh vertkqlllv vdisgfqlsm
      241 ktpfrtafkt illltkelel ykeelvskpa llainkmdlp cakynldelm tqlenpqdff
      301 hlleeemipe ntlefrevip istytgegie elktclrksi deqaeqvnee yrkkkllllq
      361 tskeeqmnrs whs
//
LOCUS       XP_041322547             165 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM237B [Pyrgilauda ruficollis].
ACCESSION   XP_041322547
VERSION     XP_041322547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466613.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="protein FAM237B"
                     /calculated_mol_wt=19285
     CDS             1..165
                     /gene="FAM237B"
                     /coded_by="XM_041466613.1:161..658"
                     /db_xref="GeneID:121353087"
ORIGIN      
        1 msffiskwlt fvsqgycfps prlntvssss mefvwkrwwy lqlgcmllvn lvyanleyqk
       61 etppslreid hqcwevsshg lvemkklkva dtvialwdfm mflkespkpk hndlfndlaq
      121 nfwdmyvdcv lsrshgmgrr qltspkysst yshrtlegsa ftnpf
//
LOCUS       XP_041322548             772 aa            linear   VRT 06-MAY-2021
DEFINITION  oxysterol-binding protein-related protein 10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322548
VERSION     XP_041322548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="oxysterol-binding protein-related protein 10"
                     /calculated_mol_wt=83970
     Region          81..181
                     /region_name="PH_ORP10_ORP11"
                     /note="Human Oxysterol binding protein (OSBP) related
                     proteins 10 and 11 (ORP10 and ORP11) Pleckstrin homology
                     (PH) domain; cd13291"
                     /db_xref="CDD:270106"
     Region          409..770
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     CDS             1..772
                     /gene="OSBPL10"
                     /coded_by="XM_041466614.1:56..2374"
                     /db_xref="GeneID:121353088"
ORIGIN      
        1 mekaageggg snsssrsssr ptsagsspss ssasrglpgr aaaagrldgg ggggssspgs
       61 aaaspggaqa pgggrrresv legtlskytn llqgwqsryf vldfetgilq yfmneqtknq
      121 spkprgalsl agaiispsde vphmlvvysa ngemyklraa dakekqywit qlrscakyhk
      181 endsksisss rsrsssllpp gtansaspsg qkymntsgpt vvtithhksp aaarraksqr
      241 sgqlhevrei msqaegqqkn lvqaieslpn sgpltaldqd llllkatsaa tlsclgecls
      301 llqqsmhqvg qqhnrtlssd gilgwpgpks hsteelknga lsslssasan itwastivps
      361 aaqdaqalqp ntehsaseli lvedemtdte dneeedlgvm ddqrsvilhl isqlklgmdl
      421 trvvlptfil ekrsllemya nfmahpdlfl siaagatpee rivcfveyyl tafhegrkga
      481 vakkpynpii getfhcswdv pkdkvkafrt ngastlskds akelgqdqst cyklrfvaeq
      541 vshhppvscf yceckekkmc vnahvwtksk fmgmsigvsm vgegvlhlle heeeyvftlp
      601 sayarsilti pwvelggkvn incartgysa tvtfhtkpfy ggkvhrvtae vkhnptntiv
      661 ckaqgewngt leftysngdt kvidttklpv irkkirptan qgplesrrlw qqvtnslkeg
      721 nidaatehkh rleerqraee rqraalttpw kpkyfakegd gwlyvnplwk th
//
LOCUS       XP_041322549             516 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein KIAA0895 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322549
VERSION     XP_041322549.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466615.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..516
                     /product="uncharacterized protein KIAA0895 homolog isoform
                     X1"
                     /calculated_mol_wt=58404
     Region          177..502
                     /region_name="DUF1704"
                     /note="Domain of unknown function (DUF1704); cl06858"
                     /db_xref="CDD:471526"
     CDS             1..516
                     /gene="KIAA0895"
                     /coded_by="XM_041466615.1:205..1755"
                     /db_xref="GeneID:121353089"
ORIGIN      
        1 mlesicvtek lhwpktelsr ksvlslevhk lninnenslq hppsgilkdi fttgtssynv
       61 llqskeekkh haqkqssshh kkhrratpkr sssprgaehr rgkaplsllg grrcgprqpp
      121 llgacpapaa lrfgggasaa gsapapparp rsrakkhssl akpkqspssr shgqegdaag
      181 qklclltaik psnvekekvk ffssdftynp qfeyenpalp nvlakhshas drflkqsini
      241 mkrtlqkygs yekfeqatgg slltksriwn hvrkymvkeg clgeivvhlt edllsrasmt
      301 vvngrptlti nvstarehwl egmlrheigt hyfrgfnnns qpwcnrngrr khglkpinpt
      361 eeglasihsv lfrkdpflwr aallyytvyq asqmsfsqlf hdvgkfvkdp ntrwdycvra
      421 krgwtdtsqp gcfnkdqvyl dgilrilryr esidfhllta lgkisyedvd rlkglavien
      481 mrvphflqdh arymehlkki mevneltdee lqdlin
//
LOCUS       XP_041322550             479 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein KIAA0895 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322550
VERSION     XP_041322550.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466616.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..479
                     /product="uncharacterized protein KIAA0895 homolog isoform
                     X2"
                     /calculated_mol_wt=53818
     Region          177..449
                     /region_name="DUF1704"
                     /note="Domain of unknown function (DUF1704); cl06858"
                     /db_xref="CDD:471526"
     CDS             1..479
                     /gene="KIAA0895"
                     /coded_by="XM_041466616.1:205..1644"
                     /db_xref="GeneID:121353089"
ORIGIN      
        1 mlesicvtek lhwpktelsr ksvlslevhk lninnenslq hppsgilkdi fttgtssynv
       61 llqskeekkh haqkqssshh kkhrratpkr sssprgaehr rgkaplsllg grrcgprqpp
      121 llgacpapaa lrfgggasaa gsapapparp rsrakkhssl akpkqspssr shgqegdaag
      181 qklclltaik psnvekekvk ffssdftynp qfeyenpalp nvlakhshas drflkqsini
      241 mkrtlqkygs yekfeqatgg slltksriwn hvrkymvkeg clgeivvhlt edllsrasmt
      301 vvngrptlti nvstarehwl egmlrheigt hyfrgfnnns qpwcnrngrr khglkpinpt
      361 eeglasihsv lfrkdpflwr aallyytvyq asqmsfsqlf hdvgkfvkdp ntrwdycvra
      421 krgwtdtsqp gcfnkdqvyl dgilrilryr esidfhllta lgkerifsss sseamglyc
//
LOCUS       XP_041322551             203 aa            linear   VRT 06-MAY-2021
DEFINITION  tetraspanin-13 [Pyrgilauda ruficollis].
ACCESSION   XP_041322551
VERSION     XP_041322551.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466617.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..203
                     /product="tetraspanin-13"
                     /calculated_mol_wt=22332
     Region          <55..189
                     /region_name="Tetraspanin"
                     /note="Tetraspanin family; pfam00335"
                     /db_xref="CDD:459767"
     CDS             1..203
                     /gene="TSPAN13"
                     /coded_by="XM_041466617.1:284..895"
                     /db_xref="GeneID:121353090"
ORIGIN      
        1 macggfacsk nclcalnlly tlvsllligi aawgigfgli ssfrvvgvvi avgvflffia
       61 lvgligavkh hqvllffymi illlvfivqf svscaclaln eeqqsellev gwsntnsart
      121 diernlnccg frvfypnetc aadclrtlhc rpcapimeey sgmvlrfvgg iglffsftei
      181 lgvwltyryr nqkdpranps afi
//
LOCUS       XP_041322552             159 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein KIAA1143 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322552
VERSION     XP_041322552.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466618.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..159
                     /product="uncharacterized protein KIAA1143 homolog"
                     /calculated_mol_wt=17846
     Region          5..155
                     /region_name="DUF4604"
                     /note="Domain of unknown function (DUF4604); pfam15377"
                     /db_xref="CDD:464685"
     CDS             1..159
                     /gene="KIAA1143"
                     /coded_by="XM_041466618.1:47..526"
                     /db_xref="GeneID:121353091"
ORIGIN      
        1 mskrnqvsyv rpaepaflsr fkqrvgyreg ptvdtkreql pladddsdng sdkedeqpqv
       61 vtlkkgdlta eeamkikqqi kealkskesd depepadgki mfrkpakrss ekcldfnvss
      121 skkmkeakkt kreattsqst akqvknssll sfddeendd
//
LOCUS       XP_041322553             967 aa            linear   VRT 06-MAY-2021
DEFINITION  syndetin [Pyrgilauda ruficollis].
ACCESSION   XP_041322553
VERSION     XP_041322553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..967
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..967
                     /product="syndetin"
                     /calculated_mol_wt=111419
     Region          54..345
                     /region_name="Vps54_N"
                     /note="Vacuolar-sorting protein 54, of GARP complex;
                     pfam10475"
                     /db_xref="CDD:431303"
     Region          726..960
                     /region_name="DUF2451"
                     /note="Protein of unknown function C-terminus (DUF2451);
                     pfam10474"
                     /db_xref="CDD:463103"
     CDS             1..967
                     /gene="VPS50"
                     /coded_by="XM_041466619.1:92..2995"
                     /db_xref="GeneID:121353093"
ORIGIN      
        1 mqkikslmtr qglrspqesv ndlspienfr iptkeelrel heeptdpqaq qeiinsieev
       61 yfsndsfdiv kyelerlppv lslqeleeyr dklkqqqaav skkvadlile kqpayveele
      121 rvtslqtglq laavictngr rhlniakegf tqtslgllan qrkrqlligl lkslrtiktl
      181 qrtdvrlsem leeedypgai qlclecqkaa stfkhyscis elnsklqdtl eqieeqldva
      241 lskicknfdi nhytkvqqay rllgktqtam dqlhmhftqa ihntvfqvvl gyvelcagnt
      301 dtkfqklqyk dlcthitsds yipcladlck alwevmlsyy rtmqwhenhd qdeaavvssv
      361 sdgnnvigte ensfdrnyvk kklehglsri wqdvqlkvkt yllgtdlsnf kyddfifvld
      421 visrlmqvge efcgsksevl qesirkqsvn yfktyhrtrl eelrmflene twelcpvkss
      481 fsilqlhefk fleqsrspsv spskqpasav asavtlfeqy caggnpfeiq adskddeted
      541 vlasngyesd eqeksayqey dsdsdvpeel krdyvdeqtg dapiksvsre tlrsrkrsdy
      601 nlnkvnapil tnttlnvirl vgkymqmmni lkpiafdvih fmsqlfdyyl yavytffgrn
      661 dmfestglgl sssrlrttln riqeslidle vsadpsgtlt aaeerkekvp sphlshlvvl
      721 tsgnslygla ervvateslv flaeqfeflq phldavmpaa kkpflqqfys qtvstaselr
      781 kpvywivaak aidyeqmlll manvkwdvke imsqhnvyvd allkefeefn rrlndvskrv
      841 riplpvsnil wehcirlanr tlvegyanvk kcsnegralm qldfqqflmk lekltdirpi
      901 pdkefvetyi kayyltendm eswikehrey stkqltnlvn iclgtyinkk arqkllatid
      961 dtdrpkr
//
LOCUS       XP_041322554             268 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein DLX-6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322554
VERSION     XP_041322554.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466620.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..268
                     /product="homeobox protein DLX-6"
                     /calculated_mol_wt=29560
     Region          143..199
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..268
                     /gene="DLX6"
                     /coded_by="XM_041466620.1:111..917"
                     /db_xref="GeneID:121353094"
ORIGIN      
        1 mmtmttmadg ldaqdssksa fmefgqqqpp ppqppppphs qqsspamaga hyplhclhsa
       61 agshphhqhh hhsspysgsa gsynhrslaa ypyvshsqhs pylqsyhnss sasqtradda
      121 dqqkttvien geirfngkgk kirkprtiys slqlqalnhr fqqtqylalp eraelaaslg
      181 ltqtqvkiwf qnkrskfkkl lkqgsnphes dplpgsaals prspalppvw dvsasakgvn
      241 mppnsympgy shwyssphqd tmqrpqmm
//
LOCUS       XP_041322555             377 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 8-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322555
VERSION     XP_041322555.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466621.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="C-C chemokine receptor type 8-like"
                     /calculated_mol_wt=42207
     Region          57..332
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          58..82
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          91..112
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          128..150
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          173..189
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          217..240
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          258..280
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          300..325
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..377
                     /gene="LOC121353095"
                     /coded_by="XM_041466621.1:93..1226"
                     /db_xref="GeneID:121353095"
ORIGIN      
        1 meqnltdllg sggsedtlms ytsptpkssa ayeyafyyse lyiichpegi pafastlfpv
       61 lysilfvagl mgnalvvwil tvsmkiktmt dvyllnltvs dlllvfslpf lvqysivsqw
      121 tfgnalckii ssvyfigfys nvffitimsi drylaivhsl hvqgirttai gfitslvvwa
      181 vailasmpdl lffqevndnn qikclphypg dnngwktfsn fevnilgwli pvvvlvfcyh
      241 silknlqrch tknkykaikv vfivvivffl swtpvnivlf ldslrnmsii ndchtsqrld
      301 lavelteals fvhcclnpvi yafvgekfkk hlcdtfkkfp cllsnckgyg afsgrspdkh
      361 sslhtkssql ssvgtvl
//
LOCUS       XP_041322557             498 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor Sp8 [Pyrgilauda ruficollis].
ACCESSION   XP_041322557
VERSION     XP_041322557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="transcription factor Sp8"
                     /calculated_mol_wt=49173
     Region          19..359
                     /region_name="SP8_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Protein (SP) 8; cd22538"
                     /db_xref="CDD:411690"
     Region          363..382
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(367,369,371,373..374,377..378,381,397,399,403..404,
                     407..408,411,425,427,429,431..432,435..436,439)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          374..401
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          390..412
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          404..427
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          418..440
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          420..440
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..498
                     /gene="SP8"
                     /coded_by="XM_041466623.1:16..1512"
                     /db_xref="GeneID:121353096"
ORIGIN      
        1 matsllgeep rvgstplaml aatcnkigsp spspsalsds assfgkgfhp wkrssssasa
       61 gscgavgsgl pgfgvagaar ngssaaaaaa aaaaaalvsd sfscggspgs safsltsssa
      121 aaasspfand ysvfqapgsa gggggggggg ggaagqeaaa hqpvfiskvh tsveglqgiy
      181 prvgmahpye swfkpshpgl gagevgsaga sswwdvgagw idvqspngaa alpgslhpap
      241 gglqtslhsp lgynsdysgl ghsafssgas shllspagqh lmdgfkpvlp gsypdsapsp
      301 lagaggsmlg ggpaaplaas prssarrysg ratcdcpncq eaerlgpaga slrrkglhsc
      361 hipgcgkvyg ktshlkahlr whtgerpfvc nwlfcgkrft rsdelqrhlr thtgekrfac
      421 pvcnkrfmrs dhlskhvkth sgpggsggpg gggpgggpgp ggkkgsdtds ehsaagsppc
      481 hspellppse pghrngle
//
LOCUS       XP_041322558             924 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 22
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322558
VERSION     XP_041322558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..924
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 22"
                     /calculated_mol_wt=101943
     Region          63..180
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          231..430
                     /region_name="Reprolysin"
                     /note="Reprolysin (M12B) family zinc metalloprotease;
                     pfam01421"
                     /db_xref="CDD:426256"
     Region          445..518
                     /region_name="Disintegrin"
                     /note="pfam00200"
                     /db_xref="CDD:459709"
     Region          522..662
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     CDS             1..924
                     /gene="ADAM22"
                     /coded_by="XM_041466624.1:68..2842"
                     /db_xref="GeneID:121353098"
ORIGIN      
        1 mraaacllcl algaltaapg gagpakaaag rrgespfaer esirplrlvs geggggarwp
       61 alstrvrsea araqsthiar asfqvdafgs sfildvtlnh dllsseyler hieqggktve
      121 vkggehcyyq gkirgnsvsf valstchglh gmfydgnhty liepdenyts dddfhfhsvy
      181 ksklfefpsa dlpsefwqtn ttsqnfvvrp rhkrrkrqvr qiprkveeet kyielmivnd
      241 hlmckkhrls vghtnsyaks vvnmadliyk eqlntrivlv ametwatdnk ftisenplvt
      301 lrefmkyrrd fireksdavh lfsgsrfqss rsgvahtggi csllkgggvn efgkpdlmav
      361 tlaqtlaqni gifsdrrkll sgeckcedmw sgcimgdmgy ylpskfsecd ieeyheflnn
      421 gggaclfnkp tklldppecg ngfvedgeec dcgtiaecas eggeccntct ltagsqcsng
      481 lccrkcrfep kgvlcreavn dcdiaenctg nssqcspnih kmdgyscdnr qgicfggrck
      541 trdrqckyiw gekvtaadry cyeklniegt ekgncgrekd swiqcnkqdv lcgyllcsni
      601 ssvprlgeld geittsilhy gkvyncsggh vkldedtdlg yvengtpcgp dmvcldhrcl
      661 pteafnfstc pgttdsqics ghgicsneik cvcdrfwggd dcsshikddl ffdkdainkg
      721 vvstniiiga iagtilvlal vlgitgwgyk nyrrqrqipq gdyvkkpgea dsfysdmppg
      781 vstnsasssk krsaflshfq istcsithys isqnislfcs rsnglshsws eripdtkhis
      841 dicengrprs nswqgniggn rkkvrgkrfr prsnstetls pakspssstg siassrkypy
      901 pmpplpdeek kvnrqsarlw etsi
//
LOCUS       XP_041322559             516 aa            linear   VRT 06-MAY-2021
DEFINITION  thyroid hormone receptor beta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322559
VERSION     XP_041322559.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466625.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..516
                     /product="thyroid hormone receptor beta isoform X1"
                     /calculated_mol_wt=58815
     Region          161..247
                     /region_name="NR_DBD_TR"
                     /note="DNA-binding domain of thyroid hormone receptors
                     (TRs) is composed of two C4-type zinc fingers; cd06961"
                     /db_xref="CDD:143519"
     Site            order(162,165,179,182,200,206,216,219)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143519"
     Site            order(172..174,180..181,183,185,187..188,191,213..214,217,
                     220,233..235,240,243..244,246..247)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143519"
     Site            order(172,175,230,232..233)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:143519"
     Region          271..513
                     /region_name="NR_LBD_TR"
                     /note="The ligand binding domain of thyroid hormone
                     receptor, a members of a superfamily of nuclear receptors;
                     cd06935"
                     /db_xref="CDD:132733"
     Site            order(324,327..328,330..331,334,337,365,368,372,384..386,
                     396,399,401,408,490,497,510)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132733"
     Site            order(336,339,343,353,357,360,508..509,512)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132733"
     Site            order(403,448,478,481..482,485,488..489,491..492)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132733"
     CDS             1..516
                     /gene="THRB"
                     /coded_by="XM_041466625.1:1..1551"
                     /db_xref="GeneID:121353099"
ORIGIN      
        1 mvaewawlkg sasyqcspve mhrnttasge lgnhllsktp hlskilakpt vcsaavfakh
       61 pgrglplwdr lihlpdrnqk wnvvgitenn fcrkrhfkny viqrngqqll qcrhastwts
      121 tilhpgytka nfqimssvqe yqkeekkckg yipsyldkde lcvvcgdkat gyhyrcitce
      181 gckgffrrti qknlhptysc kyegkcvidk vtrnqcqecr fkkcifvgma tdlvlddskr
      241 lakrklieen rekrrreelq ktighkpept deewelikiv teahvatnaq gshwkqkrkf
      301 lpedigqapi vnapeggkvd leafsqftki itpaitrvvd fakklpmfce lpcedqiill
      361 kgccmeimsl raavrydpes etltlngema vtrgqlkngg lgvvsdaifd lgmslssfnl
      421 ddtevallqa vllmssdrpg lvcveriekc qegfllafeh yinyrkhhva hfwpkllmkv
      481 tdlrmigach asrflhmkve cptelfpplf levfed
//
LOCUS       XP_041322560             476 aa            linear   VRT 06-MAY-2021
DEFINITION  thyroid hormone receptor beta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322560
VERSION     XP_041322560.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466626.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="thyroid hormone receptor beta isoform X2"
                     /calculated_mol_wt=54408
     Region          121..207
                     /region_name="NR_DBD_TR"
                     /note="DNA-binding domain of thyroid hormone receptors
                     (TRs) is composed of two C4-type zinc fingers; cd06961"
                     /db_xref="CDD:143519"
     Site            order(122,125,139,142,160,166,176,179)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143519"
     Site            order(132..134,140..141,143,145,147..148,151,173..174,177,
                     180,193..195,200,203..204,206..207)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143519"
     Site            order(132,135,190,192..193)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:143519"
     Region          231..473
                     /region_name="NR_LBD_TR"
                     /note="The ligand binding domain of thyroid hormone
                     receptor, a members of a superfamily of nuclear receptors;
                     cd06935"
                     /db_xref="CDD:132733"
     Site            order(284,287..288,290..291,294,297,325,328,332,344..346,
                     356,359,361,368,450,457,470)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132733"
     Site            order(296,299,303,313,317,320,468..469,472)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132733"
     Site            order(363,408,438,441..442,445,448..449,451..452)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132733"
     CDS             1..476
                     /gene="THRB"
                     /coded_by="XM_041466626.1:20..1450"
                     /db_xref="GeneID:121353099"
ORIGIN      
        1 mnycmqeiye vhpaagsncy mqstdyctyi ednqgysscd aqvlhsnniy meqawavnqp
       61 ytcsypgnvf kseysdmdma lnqynqpeff teekptfsqv qspsysqkkg yipsyldkde
      121 lcvvcgdkat gyhyrcitce gckgffrrti qknlhptysc kyegkcvidk vtrnqcqecr
      181 fkkcifvgma tdlvlddskr lakrklieen rekrrreelq ktighkpept deewelikiv
      241 teahvatnaq gshwkqkrkf lpedigqapi vnapeggkvd leafsqftki itpaitrvvd
      301 fakklpmfce lpcedqiill kgccmeimsl raavrydpes etltlngema vtrgqlkngg
      361 lgvvsdaifd lgmslssfnl ddtevallqa vllmssdrpg lvcveriekc qegfllafeh
      421 yinyrkhhva hfwpkllmkv tdlrmigach asrflhmkve cptelfpplf levfed
//
LOCUS       XP_041322561             369 aa            linear   VRT 06-MAY-2021
DEFINITION  thyroid hormone receptor beta isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322561
VERSION     XP_041322561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="thyroid hormone receptor beta isoform X3"
                     /calculated_mol_wt=41966
     Region          14..100
                     /region_name="NR_DBD_TR"
                     /note="DNA-binding domain of thyroid hormone receptors
                     (TRs) is composed of two C4-type zinc fingers; cd06961"
                     /db_xref="CDD:143519"
     Site            order(15,18,32,35,53,59,69,72)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143519"
     Site            order(25..27,33..34,36,38,40..41,44,66..67,70,73,86..88,
                     93,96..97,99..100)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143519"
     Site            order(25,28,83,85..86)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:143519"
     Region          124..366
                     /region_name="NR_LBD_TR"
                     /note="The ligand binding domain of thyroid hormone
                     receptor, a members of a superfamily of nuclear receptors;
                     cd06935"
                     /db_xref="CDD:132733"
     Site            order(177,180..181,183..184,187,190,218,221,225,237..239,
                     249,252,254,261,343,350,363)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132733"
     Site            order(189,192,196,206,210,213,361..362,365)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132733"
     Site            order(256,301,331,334..335,338,341..342,344..345)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132733"
     CDS             1..369
                     /gene="THRB"
                     /coded_by="XM_041466627.1:313..1422"
                     /db_xref="GeneID:121353099"
ORIGIN      
        1 msgyipsyld kdelcvvcgd katgyhyrci tcegckgffr rtiqknlhpt ysckyegkcv
       61 idkvtrnqcq ecrfkkcifv gmatdlvldd skrlakrkli eenrekrrre elqktighkp
      121 eptdeeweli kivteahvat naqgshwkqk rkflpedigq apivnapegg kvdleafsqf
      181 tkiitpaitr vvdfakklpm fcelpcedqi illkgccmei mslraavryd pesetltlng
      241 emavtrgqlk ngglgvvsda ifdlgmslss fnlddteval lqavllmssd rpglvcveri
      301 ekcqegflla fehyinyrkh hvahfwpkll mkvtdlrmig achasrflhm kvecptelfp
      361 plflevfed
//
LOCUS       XP_041322562             369 aa            linear   VRT 06-MAY-2021
DEFINITION  thyroid hormone receptor beta isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322562
VERSION     XP_041322562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="thyroid hormone receptor beta isoform X3"
                     /calculated_mol_wt=41966
     Region          14..100
                     /region_name="NR_DBD_TR"
                     /note="DNA-binding domain of thyroid hormone receptors
                     (TRs) is composed of two C4-type zinc fingers; cd06961"
                     /db_xref="CDD:143519"
     Site            order(15,18,32,35,53,59,69,72)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143519"
     Site            order(25..27,33..34,36,38,40..41,44,66..67,70,73,86..88,
                     93,96..97,99..100)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143519"
     Site            order(25,28,83,85..86)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:143519"
     Region          124..366
                     /region_name="NR_LBD_TR"
                     /note="The ligand binding domain of thyroid hormone
                     receptor, a members of a superfamily of nuclear receptors;
                     cd06935"
                     /db_xref="CDD:132733"
     Site            order(177,180..181,183..184,187,190,218,221,225,237..239,
                     249,252,254,261,343,350,363)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132733"
     Site            order(189,192,196,206,210,213,361..362,365)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132733"
     Site            order(256,301,331,334..335,338,341..342,344..345)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132733"
     CDS             1..369
                     /gene="THRB"
                     /coded_by="XM_041466628.1:242..1351"
                     /db_xref="GeneID:121353099"
ORIGIN      
        1 msgyipsyld kdelcvvcgd katgyhyrci tcegckgffr rtiqknlhpt ysckyegkcv
       61 idkvtrnqcq ecrfkkcifv gmatdlvldd skrlakrkli eenrekrrre elqktighkp
      121 eptdeeweli kivteahvat naqgshwkqk rkflpedigq apivnapegg kvdleafsqf
      181 tkiitpaitr vvdfakklpm fcelpcedqi illkgccmei mslraavryd pesetltlng
      241 emavtrgqlk ngglgvvsda ifdlgmslss fnlddteval lqavllmssd rpglvcveri
      301 ekcqegflla fehyinyrkh hvahfwpkll mkvtdlrmig achasrflhm kvecptelfp
      361 plflevfed
//
LOCUS       XP_041322563             369 aa            linear   VRT 06-MAY-2021
DEFINITION  thyroid hormone receptor beta isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322563
VERSION     XP_041322563.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466629.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="thyroid hormone receptor beta isoform X3"
                     /calculated_mol_wt=41966
     Region          14..100
                     /region_name="NR_DBD_TR"
                     /note="DNA-binding domain of thyroid hormone receptors
                     (TRs) is composed of two C4-type zinc fingers; cd06961"
                     /db_xref="CDD:143519"
     Site            order(15,18,32,35,53,59,69,72)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143519"
     Site            order(25..27,33..34,36,38,40..41,44,66..67,70,73,86..88,
                     93,96..97,99..100)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143519"
     Site            order(25,28,83,85..86)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:143519"
     Region          124..366
                     /region_name="NR_LBD_TR"
                     /note="The ligand binding domain of thyroid hormone
                     receptor, a members of a superfamily of nuclear receptors;
                     cd06935"
                     /db_xref="CDD:132733"
     Site            order(177,180..181,183..184,187,190,218,221,225,237..239,
                     249,252,254,261,343,350,363)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132733"
     Site            order(189,192,196,206,210,213,361..362,365)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132733"
     Site            order(256,301,331,334..335,338,341..342,344..345)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132733"
     CDS             1..369
                     /gene="THRB"
                     /coded_by="XM_041466629.1:212..1321"
                     /db_xref="GeneID:121353099"
ORIGIN      
        1 msgyipsyld kdelcvvcgd katgyhyrci tcegckgffr rtiqknlhpt ysckyegkcv
       61 idkvtrnqcq ecrfkkcifv gmatdlvldd skrlakrkli eenrekrrre elqktighkp
      121 eptdeeweli kivteahvat naqgshwkqk rkflpedigq apivnapegg kvdleafsqf
      181 tkiitpaitr vvdfakklpm fcelpcedqi illkgccmei mslraavryd pesetltlng
      241 emavtrgqlk ngglgvvsda ifdlgmslss fnlddteval lqavllmssd rpglvcveri
      301 ekcqegflla fehyinyrkh hvahfwpkll mkvtdlrmig achasrflhm kvecptelfp
      361 plflevfed
//
LOCUS       XP_041322565             612 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal carnitine O-octanoyltransferase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322565
VERSION     XP_041322565.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466631.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..612
                     /product="peroxisomal carnitine O-octanoyltransferase"
                     /calculated_mol_wt=69880
     Region          23..598
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..612
                     /gene="CROT"
                     /coded_by="XM_041466631.1:189..2027"
                     /db_xref="GeneID:121353100"
ORIGIN      
        1 mekqllesse ertfqyqdsl pslpvpplde slskyldavk pflnqeeyqr tedivkkfen
       61 gigkelhqkl lerakmrrnw ledwwlnvay ldlristqih cnmggpgpyi ehcwppkegt
      121 qidraciniw htlkywdllr aekvaiersg navldmnqfr mlfctckipg ltrdslgsyf
      181 kteaegecps hlivlcrgrv fafdamhegs mltppeisrq lkyiqkkccs epdgpglaal
      241 tsnertkwae lreylihldp knlnllekiq rslfvvgldd csphatpedy teltrlglag
      301 dptvrwgdks ynsiffsngt csafcdhspf damalitmls yaekkiiene gkwkgsdnvr
      361 dipwpeelvf tvdskimnei ghtkelyykk vsdlqlvsya ftsfgkalir krklhpdtfv
      421 qlalqlayyk chgrpgccye tamtrrfyhg rtetirpctv eavewcksml dpsdsnyqrl
      481 qlmhkafakh nkmrkeceng kgfdrhllgl lliaqeqglp vpelygdkaf tvsggggnfv
      541 lstsltgytr fsgsavpmvq hgygcfysir ddrivatcss wkscpetdae vlcrtlfqcf
      601 hdvlqltlta ql
//
LOCUS       XP_041322566             612 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal carnitine O-octanoyltransferase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322566
VERSION     XP_041322566.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466632.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..612
                     /product="peroxisomal carnitine O-octanoyltransferase"
                     /calculated_mol_wt=69880
     Region          23..598
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..612
                     /gene="CROT"
                     /coded_by="XM_041466632.1:197..2035"
                     /db_xref="GeneID:121353100"
ORIGIN      
        1 mekqllesse ertfqyqdsl pslpvpplde slskyldavk pflnqeeyqr tedivkkfen
       61 gigkelhqkl lerakmrrnw ledwwlnvay ldlristqih cnmggpgpyi ehcwppkegt
      121 qidraciniw htlkywdllr aekvaiersg navldmnqfr mlfctckipg ltrdslgsyf
      181 kteaegecps hlivlcrgrv fafdamhegs mltppeisrq lkyiqkkccs epdgpglaal
      241 tsnertkwae lreylihldp knlnllekiq rslfvvgldd csphatpedy teltrlglag
      301 dptvrwgdks ynsiffsngt csafcdhspf damalitmls yaekkiiene gkwkgsdnvr
      361 dipwpeelvf tvdskimnei ghtkelyykk vsdlqlvsya ftsfgkalir krklhpdtfv
      421 qlalqlayyk chgrpgccye tamtrrfyhg rtetirpctv eavewcksml dpsdsnyqrl
      481 qlmhkafakh nkmrkeceng kgfdrhllgl lliaqeqglp vpelygdkaf tvsggggnfv
      541 lstsltgytr fsgsavpmvq hgygcfysir ddrivatcss wkscpetdae vlcrtlfqcf
      601 hdvlqltlta ql
//
LOCUS       XP_041322567             251 aa            linear   VRT 06-MAY-2021
DEFINITION  S-acyl fatty acid synthase thioesterase, medium chain [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322567
VERSION     XP_041322567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..251
                     /product="S-acyl fatty acid synthase thioesterase, medium
                     chain"
                     /calculated_mol_wt=28085
     Region          11..248
                     /region_name="GrsT"
                     /note="Surfactin synthase thioesterase subunit [Secondary
                     metabolites biosynthesis, transport and catabolism];
                     COG3208"
                     /db_xref="CDD:442441"
     CDS             1..251
                     /gene="OLAH"
                     /coded_by="XM_041466633.1:144..899"
                     /db_xref="GeneID:121353101"
ORIGIN      
        1 meklvacvqk kpdavcrlic fpwagsgtsq laqwgrlfnd svevfcirlp gretrlgepf
       61 akdmtsvvne issvllkelk ekpfaffghs fgtytsfava lhlkekygle pvhlfmsaah
      121 spnsaaylav ksiilpdgsn dllaimeilg gnfelphded vwrdtaltfk edarlfqtfs
      181 fektemntpf scdityfcgs ddkiydakgw qeltsgdtsf yelpgdhlyl lkpsnesfli
      241 khitrsieng l
//
LOCUS       XP_041322568             422 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0415 protein C7orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322568
VERSION     XP_041322568.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466634.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="UPF0415 protein C7orf25 homolog"
                     /calculated_mol_wt=46377
     Region          1..219
                     /region_name="DUF5614"
                     /note="Family of unknown function (DUF5614); pfam18474"
                     /db_xref="CDD:436527"
     Region          249..410
                     /region_name="DUF1308"
                     /note="Protein of unknown function (DUF1308); pfam07000"
                     /db_xref="CDD:399767"
     CDS             1..422
                     /gene="CUNH7orf25"
                     /coded_by="XM_041466634.1:171..1439"
                     /db_xref="GeneID:121353102"
ORIGIN      
        1 msvqsllcer iavakdlikr aealsksqkr rieggaklcs klkaelnflh kveagkvaik
       61 eshlqstnlt hlqaiiqsae nledvvsvlh vfayedrfgd rqtlvvdvva ngghtwvkai
      121 grkaealhni wlgrgqygdk svieqaedfl qasrqqpvey snphiifafy nsvsspmaer
      181 lkemgisvrg dvvavnslve psaenehldt sesdeegpel lqvtrvdren lvasiafptq
      241 ikvnicnrvn ldittlityv salsyggcyf vfkekvlteq aaqerrervl pqlkefmegk
      301 elfacesavr dfqsiletlg gpgekeraal lvkrinvvpd qpsdralglv asskinsrsl
      361 aifgtgdtlk aitmtansgf vraaanqgvr fsvfvhqpra lteskesfat plpkrcpsdn
      421 gv
//
LOCUS       XP_041322569             422 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0415 protein C7orf25 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322569
VERSION     XP_041322569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="UPF0415 protein C7orf25 homolog"
                     /calculated_mol_wt=46377
     Region          1..219
                     /region_name="DUF5614"
                     /note="Family of unknown function (DUF5614); pfam18474"
                     /db_xref="CDD:436527"
     Region          249..410
                     /region_name="DUF1308"
                     /note="Protein of unknown function (DUF1308); pfam07000"
                     /db_xref="CDD:399767"
     CDS             1..422
                     /gene="CUNH7orf25"
                     /coded_by="XM_041466635.1:105..1373"
                     /db_xref="GeneID:121353102"
ORIGIN      
        1 msvqsllcer iavakdlikr aealsksqkr rieggaklcs klkaelnflh kveagkvaik
       61 eshlqstnlt hlqaiiqsae nledvvsvlh vfayedrfgd rqtlvvdvva ngghtwvkai
      121 grkaealhni wlgrgqygdk svieqaedfl qasrqqpvey snphiifafy nsvsspmaer
      181 lkemgisvrg dvvavnslve psaenehldt sesdeegpel lqvtrvdren lvasiafptq
      241 ikvnicnrvn ldittlityv salsyggcyf vfkekvlteq aaqerrervl pqlkefmegk
      301 elfacesavr dfqsiletlg gpgekeraal lvkrinvvpd qpsdralglv asskinsrsl
      361 aifgtgdtlk aitmtansgf vraaanqgvr fsvfvhqpra lteskesfat plpkrcpsdn
      421 gv
//
LOCUS       XP_041322570             573 aa            linear   VRT 06-MAY-2021
DEFINITION  thioredoxin domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322570
VERSION     XP_041322570.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466636.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..573
                     /product="thioredoxin domain-containing protein 3"
                     /calculated_mol_wt=64792
     Region          11..113
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Region          155..288
                     /region_name="NDPk"
                     /note="Nucleoside diphosphate kinases (NDP kinases,
                     NDPks): NDP kinases, responsible for the synthesis of
                     nucleoside triphosphates (NTPs), are involved in numerous
                     regulatory processes associated with proliferation,
                     development, and differentiation. They are...; cl00335"
                     /db_xref="CDD:469726"
     Site            order(162,202,210,241,245,259,269,272,274..275,283)
                     /site_type="active"
                     /db_xref="CDD:238335"
     Site            order(166,171..173,176,179,188..190)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:238335"
     Region          302..433
                     /region_name="NDPk_TX"
                     /note="NDP kinase domain of thioredoxin domain-containing
                     proteins (TXNDC3 and TXNDC6): Txl-2 (TXNDC6) and Sptrx-2
                     (TXNDC3) are fusion proteins of Group II N-terminal
                     thioredoxin domains followed by one or three NDP kinase
                     domains, respectively. Sptrx-2, which...; cd04416"
                     /db_xref="CDD:239879"
     Site            order(309,348,356,384,390,403,414,417,419..420,428)
                     /site_type="active"
                     /db_xref="CDD:239879"
     Site            order(313,317..319,322,325,334..336)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:239879"
     Region          436..567
                     /region_name="NDPk_TX"
                     /note="NDP kinase domain of thioredoxin domain-containing
                     proteins (TXNDC3 and TXNDC6): Txl-2 (TXNDC6) and Sptrx-2
                     (TXNDC3) are fusion proteins of Group II N-terminal
                     thioredoxin domains followed by one or three NDP kinase
                     domains, respectively. Sptrx-2, which...; cd04416"
                     /db_xref="CDD:239879"
     Site            order(443,482,490,518,524,538,548,551,553..554,562)
                     /site_type="active"
                     /db_xref="CDD:239879"
     Site            order(447,451..453,456,459,468..470)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:239879"
     CDS             1..573
                     /gene="NME8"
                     /coded_by="XM_041466636.1:1..1722"
                     /db_xref="GeneID:121353103"
ORIGIN      
        1 magkkkeial qtiitneeqw demlkikgiv vidvyqawcg pckavlnllk klrndfsedn
       61 vlhfavaead sieilkpfrr scepvflfcv hgkilamvkg vnaplitkiv tdlvqeerei
      121 aagekeraev eelvfheegs segsaeevve eevltysvgi ikpddvlagr veeikkkikd
      181 agfdieadee rmlteeqirv fyarnkdepd fnafvqfmms gpchvliitk keatgaipqw
      241 ielqktsesg epeepiklpg lketeslvnl cdvqdsveda srqlafffpn fhideaghna
      301 aertlaiirp tllkerrnsi iqrikddgfq iamqkeiils edqvrtfyke hvdqdyfpvl
      361 leqmtsgptl ilaltrenav shwrsllgpk ileeakenpe slraqfsfen vpinqlhgss
      421 tpsdaqkele fffpeehtfa likpdaakth kdeimkkvke agfsiskvke qsltremaah
      481 fykdhegkpf fdelvnfmtq gpsvimvlsk enaveewrkl mgptdpeeak ktcpesiraq
      541 fahdilsnav hgasniehae rsihfafgel dad
//
LOCUS       XP_041322571             629 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322571
VERSION     XP_041322571.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466637.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X1"
                     /calculated_mol_wt=70734
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..629
                     /gene="DYNC1I1"
                     /coded_by="XM_041466637.1:269..2158"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gevifclyce
      601 yidrnsgcst qrrvdalcpd lggdprqps
//
LOCUS       XP_041322572             629 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322572
VERSION     XP_041322572.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466638.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X1"
                     /calculated_mol_wt=70734
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..629
                     /gene="DYNC1I1"
                     /coded_by="XM_041466638.1:266..2155"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gevifclyce
      601 yidrnsgcst qrrvdalcpd lggdprqps
//
LOCUS       XP_041322573             629 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322573
VERSION     XP_041322573.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466639.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X1"
                     /calculated_mol_wt=70734
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..629
                     /gene="DYNC1I1"
                     /coded_by="XM_041466639.1:356..2245"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gevifclyce
      601 yidrnsgcst qrrvdalcpd lggdprqps
//
LOCUS       XP_041322574             629 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322574
VERSION     XP_041322574.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466640.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X1"
                     /calculated_mol_wt=70734
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..629
                     /gene="DYNC1I1"
                     /coded_by="XM_041466640.1:1199..3088"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gevifclyce
      601 yidrnsgcst qrrvdalcpd lggdprqps
//
LOCUS       XP_041322575             629 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322575
VERSION     XP_041322575.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466641.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X1"
                     /calculated_mol_wt=70734
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..629
                     /gene="DYNC1I1"
                     /coded_by="XM_041466641.1:353..2242"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gevifclyce
      601 yidrnsgcst qrrvdalcpd lggdprqps
//
LOCUS       XP_041322577             629 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322577
VERSION     XP_041322577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466643.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..629
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X1"
                     /calculated_mol_wt=70734
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..629
                     /gene="DYNC1I1"
                     /coded_by="XM_041466643.1:681..2570"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gevifclyce
      601 yidrnsgcst qrrvdalcpd lggdprqps
//
LOCUS       XP_041322578             628 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322578
VERSION     XP_041322578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466644.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..628
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X2"
                     /calculated_mol_wt=70639
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..628
                     /gene="DYNC1I1"
                     /coded_by="XM_041466644.1:269..2155"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gelavphnde
      601 wtrfartlve iranradsee egavelsa
//
LOCUS       XP_041322579             622 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322579
VERSION     XP_041322579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..622
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X3"
                     /calculated_mol_wt=69840
     Region          126..156
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          274..320
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <301..590
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          329..368
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          471..512
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..556
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          564..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..622
                     /gene="DYNC1I1"
                     /coded_by="XM_041466645.1:269..2137"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvptpms pssksvstps dagsqdsgdl gpigrtlqwd tdpsvlqlqs
      121 dselgrrlhk lgvskitqvd flprevvsys ketqtplath qseededdee mvepktqddl
      181 etekqdqkqe vkeapprelt eeekqqvlhs eefliffdrt irvieralae dsdiffdysg
      241 rdveekdgdv qaganlsfnr qfydehwskh rvvtcmdwsl qypelmvasy nnnedaphep
      301 dgvalvwnmk fkkttpeyvf hcqssvmsvc farfhpnlvv ggtysgqivl wdnrshrrtp
      361 vqrtplsaaa hthpvycvnv vgtqnahnli tvstdgkmcs wsldmlstpq esmelvynks
      421 kpvavtgmaf ptgdvnnfvv gseegtvyta crhgskagig eifeghqgpv tginchmavg
      481 pidfshlfvt ssfdwtvklw ttkhnkplys fednadyvyd vmwspvhpal facvdgmgrl
      541 dlwnlnndte vptasvtieg asalnrvrwa qagkevavgd segriwvydv gevifclysg
      601 cstqrrvdal cpdlggdprq ps
//
LOCUS       XP_041322580             618 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322580
VERSION     XP_041322580.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466646.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..618
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X4"
                     /calculated_mol_wt=69635
     Region          115..145
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          263..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <290..579
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          318..357
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          365..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          414..453
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          460..501
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          507..545
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          553..579
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..618
                     /gene="DYNC1I1"
                     /coded_by="XM_041466646.1:269..2125"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvstpsd agsqdsgdlg pigrtlqwdt dpsvlqlqsd selgrrlhkl
      121 gvskitqvdf lprevvsysk etqtplathq seededdeem vepktqddle tekqdqkqev
      181 keapprelte eekqqvlhse efliffdrti rvieralaed sdiffdysgr dveekdgdvq
      241 aganlsfnrq fydehwskhr vvtcmdwslq ypelmvasyn nnedaphepd gvalvwnmkf
      301 kkttpeyvfh cqssvmsvcf arfhpnlvvg gtysgqivlw dnrshrrtpv qrtplsaaah
      361 thpvycvnvv gtqnahnlit vstdgkmcsw sldmlstpqe smelvynksk pvavtgmafp
      421 tgdvnnfvvg seegtvytac rhgskagige ifeghqgpvt ginchmavgp idfshlfvts
      481 sfdwtvklwt tkhnkplysf ednadyvydv mwspvhpalf acvdgmgrld lwnlnndtev
      541 ptasvtiega salnrvrwaq agkevavgds egriwvydvg evifclycey idrnsgcstq
      601 rrvdalcpdl ggdprqps
//
LOCUS       XP_041322581             617 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic dynein 1 intermediate chain 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322581
VERSION     XP_041322581.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466647.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..617
                     /product="cytoplasmic dynein 1 intermediate chain 1
                     isoform X5"
                     /calculated_mol_wt=69540
     Region          115..145
                     /region_name="Dynein_IC2"
                     /note="Cytoplasmic dynein 1 intermediate chain 2;
                     pfam11540"
                     /db_xref="CDD:463291"
     Region          263..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <290..579
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          318..357
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          365..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          414..453
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          460..501
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          507..545
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          553..579
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..617
                     /gene="DYNC1I1"
                     /coded_by="XM_041466647.1:269..2122"
                     /db_xref="GeneID:121353104"
ORIGIN      
        1 msdksdlkae lerkkqrlaq ireekkrkee erkkkeadlq qkkepaqeds dldrkrrete
       61 allqsigisp epplvstpsd agsqdsgdlg pigrtlqwdt dpsvlqlqsd selgrrlhkl
      121 gvskitqvdf lprevvsysk etqtplathq seededdeem vepktqddle tekqdqkqev
      181 keapprelte eekqqvlhse efliffdrti rvieralaed sdiffdysgr dveekdgdvq
      241 aganlsfnrq fydehwskhr vvtcmdwslq ypelmvasyn nnedaphepd gvalvwnmkf
      301 kkttpeyvfh cqssvmsvcf arfhpnlvvg gtysgqivlw dnrshrrtpv qrtplsaaah
      361 thpvycvnvv gtqnahnlit vstdgkmcsw sldmlstpqe smelvynksk pvavtgmafp
      421 tgdvnnfvvg seegtvytac rhgskagige ifeghqgpvt ginchmavgp idfshlfvts
      481 sfdwtvklwt tkhnkplysf ednadyvydv mwspvhpalf acvdgmgrld lwnlnndtev
      541 ptasvtiega salnrvrwaq agkevavgds egriwvydvg elavphndew trfartlvei
      601 ranradseee gavelsa
//
LOCUS       XP_041322582             510 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic amino acid decarboxylase GADL1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322582
VERSION     XP_041322582.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466648.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="acidic amino acid decarboxylase GADL1 isoform
                     X1"
                     /calculated_mol_wt=58234
     Region          64..509
                     /region_name="GadA"
                     /note="Glutamate or tyrosine decarboxylase or a related
                     PLP-dependent protein [Amino acid transport and
                     metabolism]; COG0076"
                     /db_xref="CDD:439846"
     CDS             1..510
                     /gene="GADL1"
                     /coded_by="XM_041466648.1:479..2011"
                     /db_xref="GeneID:121353105"
ORIGIN      
        1 mevsvckqem lqkknavlvd giilngpimd skagekfvee ackiimeevv qkaddvtekv
       61 cewqapeklk qildlemrdt gechqkilql crdvikysvk tnhprffnql yagidyyslv
      121 arfitealnp svytyevspv fllveeavik kmiefigwee gdgifnpggs vsnmyamnla
      181 ryrfcpeike kglsglprlv lfaseechys mkkaasflgi gtenvyfikt dergkmipee
      241 lekqvqrark egsapflvca tagttvlgaf dpldkiadic ekhglwlhvd aswggsalis
      301 rkhrrllhgi hradsvawnp hkmllagiqc callvkdnsg llkkcysaea aylfqqdkfy
      361 dvsydtgdks iqcsrrpdaf kfwlmwkalg ttgleervnr alaltrylve eikkregfql
      421 llepeyanvc fwyippslrk medgpefwqk lhqvapiike rmmkkgsmml gyqphwgkvn
      481 ffrqvvispq vsredmdfll deiellakdl
//
LOCUS       XP_041322583             436 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic amino acid decarboxylase GADL1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322583
VERSION     XP_041322583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="acidic amino acid decarboxylase GADL1 isoform
                     X2"
                     /calculated_mol_wt=49302
     Region          64..421
                     /region_name="GadA"
                     /note="Glutamate or tyrosine decarboxylase or a related
                     PLP-dependent protein [Amino acid transport and
                     metabolism]; COG0076"
                     /db_xref="CDD:439846"
     CDS             1..436
                     /gene="GADL1"
                     /coded_by="XM_041466649.1:482..1792"
                     /db_xref="GeneID:121353105"
ORIGIN      
        1 mevsvckqem lqkknavlvd giilngpimd skagekfvee ackiimeevv qkaddvtekv
       61 cewqapeklk qildlemrdt gechqkilql crdvikysvk tnhprffnql yagidyyslv
      121 arfitealnp svytyevspv fllveeavik kmiefigwee gdgifnpggs vsnmyamnla
      181 ryrfcpeike kglsglprlv lfaseechys mkkaasflgi gtenvyfikt dergkmipee
      241 lekqvqrark egsapflvca tagttvlgaf dpldkiadic ekhglwlhvd aswggsalis
      301 rkhrrllhgi hradsvawnp hkmllagiqc callvkdnsg llkkcysaea aylfqqdkfy
      361 dvsydtgdks iqcsrrpdaf kfwlmwkalg ttgleervnr alaltrylve eikkregfql
      421 llesmqtsaf gtfhra
//
LOCUS       XP_041322584             234 aa            linear   VRT 06-MAY-2021
DEFINITION  STARD3 N-terminal-like protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322584
VERSION     XP_041322584.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466650.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="STARD3 N-terminal-like protein isoform X1"
                     /calculated_mol_wt=26413
     Region          49..215
                     /region_name="MENTAL"
                     /note="Cholesterol-capturing domain; pfam10457"
                     /db_xref="CDD:463097"
     CDS             1..234
                     /gene="STARD3NL"
                     /coded_by="XM_041466650.1:274..978"
                     /db_xref="GeneID:121353106"
ORIGIN      
        1 mirvpadaen ahsssvescp slrdvpsinp tqlmariesy egrekkgisd vrrtfclfvt
       61 fdllfitllw iielnvkggi ettlekevlh ydysssyfdi fllavfrfkv lilayamcrl
      121 rhwwaiaftt avtsafllak viisqlfsqg afgyvlpiis filawietwf ldfkvlpqea
      181 eeenrfliaq daseraallh pgvlsdgqfy sppesvagsd edseekqdse kpiv
//
LOCUS       XP_041322585             234 aa            linear   VRT 06-MAY-2021
DEFINITION  STARD3 N-terminal-like protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322585
VERSION     XP_041322585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="STARD3 N-terminal-like protein isoform X1"
                     /calculated_mol_wt=26413
     Region          49..215
                     /region_name="MENTAL"
                     /note="Cholesterol-capturing domain; pfam10457"
                     /db_xref="CDD:463097"
     CDS             1..234
                     /gene="STARD3NL"
                     /coded_by="XM_041466651.1:129..833"
                     /db_xref="GeneID:121353106"
ORIGIN      
        1 mirvpadaen ahsssvescp slrdvpsinp tqlmariesy egrekkgisd vrrtfclfvt
       61 fdllfitllw iielnvkggi ettlekevlh ydysssyfdi fllavfrfkv lilayamcrl
      121 rhwwaiaftt avtsafllak viisqlfsqg afgyvlpiis filawietwf ldfkvlpqea
      181 eeenrfliaq daseraallh pgvlsdgqfy sppesvagsd edseekqdse kpiv
//
LOCUS       XP_041322587             234 aa            linear   VRT 06-MAY-2021
DEFINITION  STARD3 N-terminal-like protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322587
VERSION     XP_041322587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="STARD3 N-terminal-like protein isoform X1"
                     /calculated_mol_wt=26413
     Region          49..215
                     /region_name="MENTAL"
                     /note="Cholesterol-capturing domain; pfam10457"
                     /db_xref="CDD:463097"
     CDS             1..234
                     /gene="STARD3NL"
                     /coded_by="XM_041466653.1:274..978"
                     /db_xref="GeneID:121353106"
ORIGIN      
        1 mirvpadaen ahsssvescp slrdvpsinp tqlmariesy egrekkgisd vrrtfclfvt
       61 fdllfitllw iielnvkggi ettlekevlh ydysssyfdi fllavfrfkv lilayamcrl
      121 rhwwaiaftt avtsafllak viisqlfsqg afgyvlpiis filawietwf ldfkvlpqea
      181 eeenrfliaq daseraallh pgvlsdgqfy sppesvagsd edseekqdse kpiv
//
LOCUS       XP_041322588             216 aa            linear   VRT 06-MAY-2021
DEFINITION  STARD3 N-terminal-like protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322588
VERSION     XP_041322588.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466654.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="STARD3 N-terminal-like protein isoform X2"
                     /calculated_mol_wt=24521
     Region          49..197
                     /region_name="MENTAL"
                     /note="Cholesterol-capturing domain; pfam10457"
                     /db_xref="CDD:463097"
     CDS             1..216
                     /gene="STARD3NL"
                     /coded_by="XM_041466654.1:275..925"
                     /db_xref="GeneID:121353106"
ORIGIN      
        1 mirvpadaen ahsssvescp slrdvpsinp tqlmariesy egrekkgisd vrrtfclfvt
       61 fdllfitllw iielnvkggi ettlekevlh ydysssyfdi fllavfrfkv lilayamcrl
      121 rhwwaialfs qgafgyvlpi isfilawiet wfldfkvlpq eaeeenrfli aqdaseraal
      181 lhpgvlsdgq fysppesvag sdedseekqd sekpiv
//
LOCUS       XP_041322589             327 aa            linear   VRT 06-MAY-2021
DEFINITION  3-hydroxyisobutyrate dehydrogenase, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322589
VERSION     XP_041322589.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466655.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="3-hydroxyisobutyrate dehydrogenase,
                     mitochondrial"
                     /calculated_mol_wt=34631
     Region          35..322
                     /region_name="HIBADH"
                     /note="3-hydroxyisobutyrate dehydrogenase; TIGR01692"
                     /db_xref="CDD:130753"
     CDS             1..327
                     /gene="HIBADH"
                     /coded_by="XM_041466655.1:59..1042"
                     /db_xref="GeneID:121353108"
ORIGIN      
        1 maaavvrrgp agwwrwhrrv mvcsrtmask tpvgfvglgn mgnpmaknlv khgypvivyd
       61 vfpeackefq dlgaqvtesp advaeradri itmlpsspha kevytgangi lkkvkkgsll
      121 idsstidpav skelakaaek tgavfmdapv sggvgaarag nltfmvggve qefnaakell
      181 tcmgsnvvyc gevgtgqaak icnnmllais migtaeamnl girlgldpkl lakilnmssg
      241 rcwssdtynp vpgvmegvps annyqggfgt tlmakdlgla qisatntktp vplgsqahqi
      301 yrmmcakgya lkdfsavfqf lreeesl
//
LOCUS       XP_041322590             679 aa            linear   VRT 06-MAY-2021
DEFINITION  BMP-binding endothelial regulator protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322590
VERSION     XP_041322590.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466656.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..679
                     /product="BMP-binding endothelial regulator protein"
                     /calculated_mol_wt=75123
     Region          160..218
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     Region          232..283
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          295..351
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          358..502
                     /region_name="VWD"
                     /note="von Willebrand factor type D domain; pfam00094"
                     /db_xref="CDD:459671"
     Region          554..612
                     /region_name="C8"
                     /note="C8 domain; pfam08742"
                     /db_xref="CDD:462584"
     Region          623..676
                     /region_name="TIL"
                     /note="trypsin inhibitor-like cysteine rich domain;
                     cd19941"
                     /db_xref="CDD:410995"
     Site            order(632,636,649,653)
                     /site_type="other"
                     /note="reactive site [polypeptide binding]"
                     /db_xref="CDD:410995"
     CDS             1..679
                     /gene="BMPER"
                     /coded_by="XM_041466656.1:206..2245"
                     /db_xref="GeneID:121353109"
ORIGIN      
        1 mprlgggwpa aprlspasaa vllgvlclpg apasslltgs vakcenegei lqipfitdnp
       61 cimcvclnke vtckrekcpv lskdcalvik qrgaccerck dcsfegntyn ssmkwhlpsn
      121 pcvtyqcqeg vivesevqcv vhcknpsklr gmccpvcpgc vfegrlyneg eefrpegnkc
      181 tkcsciggrt qciqevcpil scpqhlship agqccpkclg qrkvfdlpfg sclfhsnvyd
      241 ngssfmydnc tvctckdstv ickkrcllpg ecnknkdhcc kecvsylspe evkvckfgnk
      301 ifqdgemwss vncticacvk gktecrkkqc ipvsscphgk ilnrkgccpi ctekpgvctv
      361 fgdphyntfd grtfnfqgtc qyvltkdcss saspfqvlvk ndarrtrsfs wtksvdlvlg
      421 rstislqqhl tvkwngtris lpcetpqfhi dldgyllkvt tkagleiswd gdsfvevmaa
      481 phlkgklcgl cgnynghkrd dliggdgnfk fdvddfaesw rvesnefcsr pqrkpvpelc
      541 hgtvrvklra hrecqklkaw efqschstvd yttfyrscvt dmcecpihkn cycesflayt
      601 racqreglkv hwvpeqncaa tqckhgavyd tcgpgcvktc dnwneigpcn kpciagchcp
      661 anlvlhrgrc ikpvlcpqr
//
LOCUS       XP_041322592             296 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM221A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322592
VERSION     XP_041322592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="protein FAM221A isoform X1"
                     /calculated_mol_wt=32876
     Region          17..211
                     /region_name="FAM221"
                     /note="Protein FAM221A/B; pfam14753"
                     /db_xref="CDD:464299"
     CDS             1..296
                     /gene="FAM221A"
                     /coded_by="XM_041466658.1:1..891"
                     /db_xref="GeneID:121353110"
ORIGIN      
        1 merlrvdaqa leeyaeyrri vgdddggklf tpeeyeeykr kvlparlqnr lyvswrsptg
       61 mdcklvgpet lcfcthrykq hktdyevlpk erpisvpcrv rrcpcqsfhl vplngtqpvr
      121 crckhfpdqh saapgfpcns cskcsgfhss ftcacgqpay ahetvvetke erlaqgkpvg
      181 qdvpyaamgg ltgfsslaeg ymrlddsgig apsaelleap itsmdhpflk afqgpsssaq
      241 tmpqiagsss atgqvshgkq seaddmayfe kryqerlkme kaakrkersp vpskkp
//
LOCUS       XP_041322593             238 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM221A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322593
VERSION     XP_041322593.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466659.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="protein FAM221A isoform X2"
                     /calculated_mol_wt=26175
     Region          <19..153
                     /region_name="FAM221"
                     /note="Protein FAM221A/B; pfam14753"
                     /db_xref="CDD:464299"
     CDS             1..238
                     /gene="FAM221A"
                     /coded_by="XM_041466659.1:1..717"
                     /db_xref="GeneID:121353110"
ORIGIN      
        1 merlrvdaqa leeyaeyrry kqhktdyevl pkerpisvpc rvrrcpcqsf hlvplngtqp
       61 vrcrckhfpd qhsaapgfpc nscskcsgfh ssftcacgqp ayahetvvet keerlaqgkp
      121 vgqdvpyaam ggltgfssla egymrlddsg igapsaelle apitsmdhpf lkafqgpsss
      181 aqtmpqiags ssatgqvshg kqseaddmay fekryqerlk mekaakrker spvpskkp
//
LOCUS       XP_041322594             951 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleotide-binding oligomerization domain-containing protein 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322594
VERSION     XP_041322594.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466660.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..951
                     /product="nucleotide-binding oligomerization
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=108312
     Region          26..110
                     /region_name="CARD_NOD1_CARD4"
                     /note="Caspase activation and recruitment domain similar
                     to that found in NOD1; cd08324"
                     /db_xref="CDD:260035"
     Site            order(31,34..35,38..41,43..45,47,51,92,95..96,98..106,
                     108..109)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:260035"
     Region          190..>545
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          202..373
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          521..663
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          <684..948
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          706..727
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          728..752
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          753..783
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          784..811
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          812..839
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          840..867
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          868..895
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          896..923
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          924..944
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..951
                     /gene="NOD1"
                     /coded_by="XM_041466660.1:168..3023"
                     /db_xref="GeneID:121353111"
ORIGIN      
        1 megqlcanvd isvskppgas pqsfiallkv hrellvgrir ntqclidnli kndyfsteda
       61 eivvqfptqa dkvrkildlv qskgeevsey fvyvlqkvtd ayyelqpwld eigykpseni
      121 cskpvvntdp vsrycqklrh dlgrdskffm lyaqkeevll eeiysnsime lvsftneslg
      181 qvgqlealfd davglinedg etiyvygdag igksillqki qslwarkeld igakfffrfr
      241 crmfscfked eaiclkdllf kyncypdqdp aevfhhilqf phtvlftfdg fdeiysnfdl
      301 ssvpevcspn epihplallv sllrgkllkg skkiltartg teiqkniirk kvllrgfsrn
      361 nlkeytamff kdeqqralvs nqleanpnlc slcsvplfcw iifkcfehfh smfdshelpd
      421 ssvtltdvfl lmievhlnrs vktsllksni rsqaemfksr kesllalgkm aykgmenssf
      481 ifeqeevssa niseedlqlg flrtvkgysg cdsqatyefl hltlqsffta lflvmeekvg
      541 tkelleffne cssmetaqtt clhipwlkkq lagedpfqnk ehfnftnmfl cgllsgsrqk
      601 lfrhlvspav ikrkrktlit ylgenmksrl kgytrsrlks ynqvqvqpnf vwmlrclyet
      661 qsekvgrmaa rrmhanyikl aycnacsadc saisfvlhhf qkhlaldldn nnindygikq
      721 lqpcfsklav irlsvnqvtd hgvrilyeel skyqivsflg lysnqitdvg akyvakliee
      781 cssleyvkig ankitseggk claqaiqksq tmfeigmwgn qvgdegakaf aealrnhptl
      841 tnvslafngi tteggksiae amqhnnsvri fwltkneldd eaamsfaeml kvnkklvhlw
      901 liqnqitakg vkclsealke nttiqeicln gnlisqeeak afenerriic f
//
LOCUS       XP_041322595             923 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleotide-binding oligomerization domain-containing protein 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322595
VERSION     XP_041322595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..923
                     /product="nucleotide-binding oligomerization
                     domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=105316
     Region          26..110
                     /region_name="CARD_NOD1_CARD4"
                     /note="Caspase activation and recruitment domain similar
                     to that found in NOD1; cd08324"
                     /db_xref="CDD:260035"
     Site            order(31,34..35,38..41,43..45,47,51,92,95..96,98..106,
                     108..109)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:260035"
     Region          190..>545
                     /region_name="NACHT"
                     /note="Predicted NTPase, NACHT family domain [Signal
                     transduction mechanisms]; COG5635"
                     /db_xref="CDD:444362"
     Region          202..373
                     /region_name="NACHT"
                     /note="NACHT domain; pfam05729"
                     /db_xref="CDD:428606"
     Region          521..663
                     /region_name="NLRC4_HD2"
                     /note="NLRC4 helical domain HD2; pfam17776"
                     /db_xref="CDD:465499"
     Region          <706..920
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          706..728
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          746..783
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          784..811
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          812..839
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          840..867
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          868..894
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          896..916
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..923
                     /gene="NOD1"
                     /coded_by="XM_041466661.1:166..2937"
                     /db_xref="GeneID:121353111"
ORIGIN      
        1 megqlcanvd isvskppgas pqsfiallkv hrellvgrir ntqclidnli kndyfsteda
       61 eivvqfptqa dkvrkildlv qskgeevsey fvyvlqkvtd ayyelqpwld eigykpseni
      121 cskpvvntdp vsrycqklrh dlgrdskffm lyaqkeevll eeiysnsime lvsftneslg
      181 qvgqlealfd davglinedg etiyvygdag igksillqki qslwarkeld igakfffrfr
      241 crmfscfked eaiclkdllf kyncypdqdp aevfhhilqf phtvlftfdg fdeiysnfdl
      301 ssvpevcspn epihplallv sllrgkllkg skkiltartg teiqkniirk kvllrgfsrn
      361 nlkeytamff kdeqqralvs nqleanpnlc slcsvplfcw iifkcfehfh smfdshelpd
      421 ssvtltdvfl lmievhlnrs vktsllksni rsqaemfksr kesllalgkm aykgmenssf
      481 ifeqeevssa niseedlqlg flrtvkgysg cdsqatyefl hltlqsffta lflvmeekvg
      541 tkelleffne cssmetaqtt clhipwlkkq lagedpfqnk ehfnftnmfl cgllsgsrqk
      601 lfrhlvspav ikrkrktlit ylgenmksrl kgytrsrlks ynqvqvqpnf vwmlrclyet
      661 qsekvgrmaa rrmhanyikl aycnacsadc saisfvlhhf qkhlaldldn nnindygikq
      721 lqpcfsklav irlsvnqvtd hgvrilyeel skyqivsflg lysnqitdvg akyvakliee
      781 cssleyvkig ankitseggk claqaiqksq tmfeiglafn gitteggksi aeamqhnnsv
      841 rifwltknel ddeaamsfae mlkvnkklvh lwliqnqita kgvkclseal kenttiqeic
      901 lngnlisqee akafenerri icf
//
LOCUS       XP_041322596             261 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A9 [Pyrgilauda ruficollis].
ACCESSION   XP_041322596
VERSION     XP_041322596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="homeobox protein Hox-A9"
                     /calculated_mol_wt=29045
     Region          1..182
                     /region_name="Hox9_act"
                     /note="Hox9 activation region; pfam04617"
                     /db_xref="CDD:461369"
     Region          196..252
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..261
                     /gene="HOXA9"
                     /coded_by="XM_041466662.1:271..1056"
                     /db_xref="GeneID:121353112"
ORIGIN      
        1 msapgtlsny yvdsflvpeg delaapryap aplgppprpa alaehpelap csfqpkapvf
       61 gppwspahpa gasgvpavyh pyahhqapva ppdgrymrsw lepvpgslsf pglptsrhyg
      121 ikpeplaarr adcttfdtht lslsdyacgs ppvdrdkqsh egafsesnge seangekpqi
      181 dpnnpaanwl harstrkkrc pytkhqtlel ekeflfnmyl trdrryevar llnlterqvk
      241 iwfqnrrmkm kkinkdrakd e
//
LOCUS       XP_041322597             119 aa            linear   VRT 06-MAY-2021
DEFINITION  small nuclear ribonucleoprotein Sm D1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322597
VERSION     XP_041322597.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466663.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..119
                     /product="small nuclear ribonucleoprotein Sm D1"
                     /calculated_mol_wt=13150
     Region          2..93
                     /region_name="Sm_D1"
                     /note="Sm protein D1; cd01724"
                     /db_xref="CDD:212471"
     Site            order(2,4,35..37,61..63)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212471"
     Site            order(3,6..7,18..21,30..31,33..36,39,55,57..71,74,79,
                     87..88)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212471"
     Site            order(15..21,23..35,37..41)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212471"
     Site            57..68
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212471"
     CDS             1..119
                     /gene="SNRPD1"
                     /coded_by="XM_041466663.1:119..478"
                     /db_xref="GeneID:121353114"
ORIGIN      
        1 mklvrflmkl shetvtielk ngtqvhgtit gvdvsmnthl kavkmtlknr epvqletlsi
       61 rgnniryfil pdslpldtll vdvepkvksk kreavagrgr grgrgrgrgr grgrggprr
//
LOCUS       XP_041322598             561 aa            linear   VRT 06-MAY-2021
DEFINITION  asparagine synthetase [glutamine-hydrolyzing] [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322598
VERSION     XP_041322598.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466664.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..561
                     /product="asparagine synthetase [glutamine-hydrolyzing]"
                     /calculated_mol_wt=63790
     Region          1..555
                     /region_name="asnB"
                     /note="asparagine synthetase B; Provisional; PRK09431"
                     /db_xref="CDD:236513"
     CDS             1..561
                     /gene="ASNS"
                     /coded_by="XM_041466664.1:302..1987"
                     /db_xref="GeneID:121353116"
ORIGIN      
        1 mcgiwalfgs declsvqcls amkiahrgpd afrfenvngf tnccfgfhrl avvdqlygmq
       61 pirvkkfpyl wlcyngeiyn fkqlqkqfgf dyqtlvdgev ilhlynrggi eqtasmldgv
      121 fafilldtan rkvflardty gvrplfkvlt ddgflgvcse akglinlkhs tslcskvepf
      181 lpghyevldl kpsgkvasve lvkfhsckde plhvacdtve alpsgfdldt vksnirilfe
      241 navrkrlmah rrigcllsgg ldsslvaavl lklmkeinin yplqtfaigm enspdllaar
      301 kvaahigseh hevilnteeg iqaieevifs letydittir asigmylvsk yirkktdsvv
      361 ifsgegsdel tqgyiyfhka pspeeaaees erllkelylf dvlradrtta ahglelrvpf
      421 ldhrftsyyl slpaelripk ngiekyllrl sfedsnllpk eilwrpkeaf sdgiasvkks
      481 wfsilqdyid qqvddlllek aaekypfnpp ktkesyyyrq ifekhysgrs swlphywmpr
      541 wvkatdpsar tlkhyksatq e
//
LOCUS       XP_041322599             561 aa            linear   VRT 06-MAY-2021
DEFINITION  asparagine synthetase [glutamine-hydrolyzing] [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322599
VERSION     XP_041322599.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466665.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..561
                     /product="asparagine synthetase [glutamine-hydrolyzing]"
                     /calculated_mol_wt=63790
     Region          1..555
                     /region_name="asnB"
                     /note="asparagine synthetase B; Provisional; PRK09431"
                     /db_xref="CDD:236513"
     CDS             1..561
                     /gene="ASNS"
                     /coded_by="XM_041466665.1:101..1786"
                     /db_xref="GeneID:121353116"
ORIGIN      
        1 mcgiwalfgs declsvqcls amkiahrgpd afrfenvngf tnccfgfhrl avvdqlygmq
       61 pirvkkfpyl wlcyngeiyn fkqlqkqfgf dyqtlvdgev ilhlynrggi eqtasmldgv
      121 fafilldtan rkvflardty gvrplfkvlt ddgflgvcse akglinlkhs tslcskvepf
      181 lpghyevldl kpsgkvasve lvkfhsckde plhvacdtve alpsgfdldt vksnirilfe
      241 navrkrlmah rrigcllsgg ldsslvaavl lklmkeinin yplqtfaigm enspdllaar
      301 kvaahigseh hevilnteeg iqaieevifs letydittir asigmylvsk yirkktdsvv
      361 ifsgegsdel tqgyiyfhka pspeeaaees erllkelylf dvlradrtta ahglelrvpf
      421 ldhrftsyyl slpaelripk ngiekyllrl sfedsnllpk eilwrpkeaf sdgiasvkks
      481 wfsilqdyid qqvddlllek aaekypfnpp ktkesyyyrq ifekhysgrs swlphywmpr
      541 wvkatdpsar tlkhyksatq e
//
LOCUS       XP_041322600             129 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L14 [Pyrgilauda ruficollis].
ACCESSION   XP_041322600
VERSION     XP_041322600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="60S ribosomal protein L14"
                     /calculated_mol_wt=14892
     Region          1..71
                     /region_name="Ribosomal_L14e"
                     /note="Ribosomal protein L14; pfam01929"
                     /db_xref="CDD:460388"
     CDS             1..129
                     /gene="RPL14"
                     /coded_by="XM_041466666.1:104..493"
                     /db_xref="GeneID:121353117"
ORIGIN      
        1 mpfkcmqltd fvlkfphsar qkcvrlawek eninekwsat rwakkieare kkakmtdfdr
       61 ykvmkakkmr nriikhemkk lqrlaakkgk kpgkpgkpek aakgkkpeka pkakkpekap
      121 apkaqkaqk
//
LOCUS       XP_041322602             584 aa            linear   VRT 06-MAY-2021
DEFINITION  EF-hand domain-containing family member B [Pyrgilauda ruficollis].
ACCESSION   XP_041322602
VERSION     XP_041322602.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466668.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..584
                     /product="EF-hand domain-containing family member B"
                     /calculated_mol_wt=66115
     Region          320..383
                     /region_name="EF-hand_7"
                     /note="EF-hand domain pair; pfam13499"
                     /db_xref="CDD:463900"
     CDS             1..584
                     /gene="EFHB"
                     /coded_by="XM_041466668.1:1..1755"
                     /db_xref="GeneID:121353118"
ORIGIN      
        1 maeqplpcpk etlpdgnpel pkvgklglaa nsvasclket srpvtpttvr kfrnttdpap
       61 gakiifygsa ddpdvathlt hgikstskft vaslispvpk sefqekmqdm keaiyssnre
      121 aplgkshdqs smlpegldti nttfgmkvfk dltagelvnp pktfeevdke areghdlyvl
      181 shedyyvges vnrkynshfd kssvygmetp hyedgrntak tlnwvldlds krapylvskr
      241 sddfkekyqp lvgkvfdpia etmnvppdht fglvippdec dvhdllhvrv pceflrgkdr
      301 erviliavre slkkanyrnf dvllealrhf dkngdgmihk dnlrkiffnl nlnlddelle
      361 slfdccdldk dglinyldfv nflnwkdemg vkefgekiit kgkqldaylp kdtkkedell
      421 peqedlelke pessekmpkp ltrstdrvyt nyqtsssqyn avvggipdsc yplcgvpsir
      481 sdipaprvrr lsdttnygdq gssfsilfps vfsqkgvyek dllkkrpkae ikqvlhnmgm
      541 nasderfeei wkqvctkhei kelcdceesm wnilnkines gitf
//
LOCUS       XP_041322603            1094 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and IBR domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322603
VERSION     XP_041322603.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466669.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1094
                     /product="ankyrin repeat and IBR domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=122947
     Region          <14..247
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(47,51..52,55..57,59..60,65,68,77,79,81,85..86,
                     89..90,113,115..116,120,123,143,145,147,151..152,155..157,
                     159..160,164,167,176)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          47..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          79..143
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          145..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          332..389
                     /region_name="RING-HC_RBR_ANKIB1"
                     /note="RING finger, HC subclass, found in ankyrin repeat
                     and IBR domain-containing protein 1 (ANKIB1) and similar
                     proteins; cd16774"
                     /db_xref="CDD:438430"
     Region          410..488
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          509..570
                     /region_name="Rcat_RBR_ANKIB1"
                     /note="Rcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20361"
                     /db_xref="CDD:439022"
     Region          585..>703
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..1094
                     /gene="ANKIB1"
                     /coded_by="XM_041466669.1:529..3813"
                     /db_xref="GeneID:121353119"
ORIGIN      
        1 mgntttkfrk alingdenla cqiyesnpql ketldpntsy getyqhntpl hyaarhgmnr
       61 ilgtflfvrd gnpnkrnvhn etsmhllcmg pqimisegal hprltrpsed dcrradclqm
      121 ilkwkgakld egqyeraaid avdnkkntpl hyaaasgmkt cvellvkhgg dlfaenenkd
      181 tpcdcaekqh hkelalnles rmvfsrdpea esieaeyaal dkkepyeglr lqdlrrlkdm
      241 livesadmlq aplftaeall rahdwdrekl leawmcnpes ccqrsgvqmp tpppsgynaw
      301 dtlpsprtpr ttrssvtspd eispspgdme tavcdicmcn isvfedpvdm pcghdfcrac
      361 weaflnlkiq egeahnifcp aydcfqlvpv diiesvvske mdkrylqfdi kafvennpai
      421 kwcpipgcer avrltrqgsn stgsdtlsfp mlkapavdcg kghlfcwecl geahepcdcq
      481 twkdwlqkis emkpeelvgv seayedaanc lwlltnskpc anckspiqkn egcnhmqcak
      541 ckydfcwicl eewkkhssst ggyyrctrye viqhveeqsk emtveaekkh rrfqeldrfm
      601 hyytrfknhe lsyqleqrll ktakekmeql sralsgtegg cpdttfieda vqellktrri
      661 lkcsypygff lepkstkkei felmqtdlem vtedlaqkvn rpylrtprhk iiraaclvqq
      721 krqeflasva rgvapadspe aprrsfaggt wdweylgfas peeyaefqyr rrhrqrrrgd
      781 mhsllsntpd pddpsestld tqeggssrrh gtsmvssasm gilhssslhd ytpvsrsenq
      841 dslqalssld eddpnillai qlslqesgla ideetrdfln neaslgaigt slptrldsap
      901 isidnprgal sssellelgd slmrlgagnd pfsadrlhsh pcsetrsgly stssdadsss
      961 qdpntnenll gnimawfhdm npqsialips tstetdeesq qpstedgsag qpnltdtgle
     1021 pqeehalfed alknegrgtq teestseeni ipsetvsqig dnnrevtstl dasgdsssqt
     1081 pqtsrewteh vhlv
//
LOCUS       XP_041322604            1094 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and IBR domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322604
VERSION     XP_041322604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1094
                     /product="ankyrin repeat and IBR domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=122947
     Region          <14..247
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(47,51..52,55..57,59..60,65,68,77,79,81,85..86,
                     89..90,113,115..116,120,123,143,145,147,151..152,155..157,
                     159..160,164,167,176)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          47..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          79..143
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          145..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          332..389
                     /region_name="RING-HC_RBR_ANKIB1"
                     /note="RING finger, HC subclass, found in ankyrin repeat
                     and IBR domain-containing protein 1 (ANKIB1) and similar
                     proteins; cd16774"
                     /db_xref="CDD:438430"
     Region          410..488
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          509..570
                     /region_name="Rcat_RBR_ANKIB1"
                     /note="Rcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20361"
                     /db_xref="CDD:439022"
     Region          585..>703
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..1094
                     /gene="ANKIB1"
                     /coded_by="XM_041466670.1:306..3590"
                     /db_xref="GeneID:121353119"
ORIGIN      
        1 mgntttkfrk alingdenla cqiyesnpql ketldpntsy getyqhntpl hyaarhgmnr
       61 ilgtflfvrd gnpnkrnvhn etsmhllcmg pqimisegal hprltrpsed dcrradclqm
      121 ilkwkgakld egqyeraaid avdnkkntpl hyaaasgmkt cvellvkhgg dlfaenenkd
      181 tpcdcaekqh hkelalnles rmvfsrdpea esieaeyaal dkkepyeglr lqdlrrlkdm
      241 livesadmlq aplftaeall rahdwdrekl leawmcnpes ccqrsgvqmp tpppsgynaw
      301 dtlpsprtpr ttrssvtspd eispspgdme tavcdicmcn isvfedpvdm pcghdfcrac
      361 weaflnlkiq egeahnifcp aydcfqlvpv diiesvvske mdkrylqfdi kafvennpai
      421 kwcpipgcer avrltrqgsn stgsdtlsfp mlkapavdcg kghlfcwecl geahepcdcq
      481 twkdwlqkis emkpeelvgv seayedaanc lwlltnskpc anckspiqkn egcnhmqcak
      541 ckydfcwicl eewkkhssst ggyyrctrye viqhveeqsk emtveaekkh rrfqeldrfm
      601 hyytrfknhe lsyqleqrll ktakekmeql sralsgtegg cpdttfieda vqellktrri
      661 lkcsypygff lepkstkkei felmqtdlem vtedlaqkvn rpylrtprhk iiraaclvqq
      721 krqeflasva rgvapadspe aprrsfaggt wdweylgfas peeyaefqyr rrhrqrrrgd
      781 mhsllsntpd pddpsestld tqeggssrrh gtsmvssasm gilhssslhd ytpvsrsenq
      841 dslqalssld eddpnillai qlslqesgla ideetrdfln neaslgaigt slptrldsap
      901 isidnprgal sssellelgd slmrlgagnd pfsadrlhsh pcsetrsgly stssdadsss
      961 qdpntnenll gnimawfhdm npqsialips tstetdeesq qpstedgsag qpnltdtgle
     1021 pqeehalfed alknegrgtq teestseeni ipsetvsqig dnnrevtstl dasgdsssqt
     1081 pqtsrewteh vhlv
//
LOCUS       XP_041322605            1094 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and IBR domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322605
VERSION     XP_041322605.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466671.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1094
                     /product="ankyrin repeat and IBR domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=122947
     Region          <14..247
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(47,51..52,55..57,59..60,65,68,77,79,81,85..86,
                     89..90,113,115..116,120,123,143,145,147,151..152,155..157,
                     159..160,164,167,176)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          47..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          79..143
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          145..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          332..389
                     /region_name="RING-HC_RBR_ANKIB1"
                     /note="RING finger, HC subclass, found in ankyrin repeat
                     and IBR domain-containing protein 1 (ANKIB1) and similar
                     proteins; cd16774"
                     /db_xref="CDD:438430"
     Region          410..488
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          509..570
                     /region_name="Rcat_RBR_ANKIB1"
                     /note="Rcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20361"
                     /db_xref="CDD:439022"
     Region          585..>703
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..1094
                     /gene="ANKIB1"
                     /coded_by="XM_041466671.1:103..3387"
                     /db_xref="GeneID:121353119"
ORIGIN      
        1 mgntttkfrk alingdenla cqiyesnpql ketldpntsy getyqhntpl hyaarhgmnr
       61 ilgtflfvrd gnpnkrnvhn etsmhllcmg pqimisegal hprltrpsed dcrradclqm
      121 ilkwkgakld egqyeraaid avdnkkntpl hyaaasgmkt cvellvkhgg dlfaenenkd
      181 tpcdcaekqh hkelalnles rmvfsrdpea esieaeyaal dkkepyeglr lqdlrrlkdm
      241 livesadmlq aplftaeall rahdwdrekl leawmcnpes ccqrsgvqmp tpppsgynaw
      301 dtlpsprtpr ttrssvtspd eispspgdme tavcdicmcn isvfedpvdm pcghdfcrac
      361 weaflnlkiq egeahnifcp aydcfqlvpv diiesvvske mdkrylqfdi kafvennpai
      421 kwcpipgcer avrltrqgsn stgsdtlsfp mlkapavdcg kghlfcwecl geahepcdcq
      481 twkdwlqkis emkpeelvgv seayedaanc lwlltnskpc anckspiqkn egcnhmqcak
      541 ckydfcwicl eewkkhssst ggyyrctrye viqhveeqsk emtveaekkh rrfqeldrfm
      601 hyytrfknhe lsyqleqrll ktakekmeql sralsgtegg cpdttfieda vqellktrri
      661 lkcsypygff lepkstkkei felmqtdlem vtedlaqkvn rpylrtprhk iiraaclvqq
      721 krqeflasva rgvapadspe aprrsfaggt wdweylgfas peeyaefqyr rrhrqrrrgd
      781 mhsllsntpd pddpsestld tqeggssrrh gtsmvssasm gilhssslhd ytpvsrsenq
      841 dslqalssld eddpnillai qlslqesgla ideetrdfln neaslgaigt slptrldsap
      901 isidnprgal sssellelgd slmrlgagnd pfsadrlhsh pcsetrsgly stssdadsss
      961 qdpntnenll gnimawfhdm npqsialips tstetdeesq qpstedgsag qpnltdtgle
     1021 pqeehalfed alknegrgtq teestseeni ipsetvsqig dnnrevtstl dasgdsssqt
     1081 pqtsrewteh vhlv
//
LOCUS       XP_041322606            1094 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and IBR domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322606
VERSION     XP_041322606.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466672.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1094
                     /product="ankyrin repeat and IBR domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=122947
     Region          <14..247
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(47,51..52,55..57,59..60,65,68,77,79,81,85..86,
                     89..90,113,115..116,120,123,143,145,147,151..152,155..157,
                     159..160,164,167,176)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          47..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          79..143
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          145..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          332..389
                     /region_name="RING-HC_RBR_ANKIB1"
                     /note="RING finger, HC subclass, found in ankyrin repeat
                     and IBR domain-containing protein 1 (ANKIB1) and similar
                     proteins; cd16774"
                     /db_xref="CDD:438430"
     Region          410..488
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          509..570
                     /region_name="Rcat_RBR_ANKIB1"
                     /note="Rcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20361"
                     /db_xref="CDD:439022"
     Region          585..>703
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..1094
                     /gene="ANKIB1"
                     /coded_by="XM_041466672.1:174..3458"
                     /db_xref="GeneID:121353119"
ORIGIN      
        1 mgntttkfrk alingdenla cqiyesnpql ketldpntsy getyqhntpl hyaarhgmnr
       61 ilgtflfvrd gnpnkrnvhn etsmhllcmg pqimisegal hprltrpsed dcrradclqm
      121 ilkwkgakld egqyeraaid avdnkkntpl hyaaasgmkt cvellvkhgg dlfaenenkd
      181 tpcdcaekqh hkelalnles rmvfsrdpea esieaeyaal dkkepyeglr lqdlrrlkdm
      241 livesadmlq aplftaeall rahdwdrekl leawmcnpes ccqrsgvqmp tpppsgynaw
      301 dtlpsprtpr ttrssvtspd eispspgdme tavcdicmcn isvfedpvdm pcghdfcrac
      361 weaflnlkiq egeahnifcp aydcfqlvpv diiesvvske mdkrylqfdi kafvennpai
      421 kwcpipgcer avrltrqgsn stgsdtlsfp mlkapavdcg kghlfcwecl geahepcdcq
      481 twkdwlqkis emkpeelvgv seayedaanc lwlltnskpc anckspiqkn egcnhmqcak
      541 ckydfcwicl eewkkhssst ggyyrctrye viqhveeqsk emtveaekkh rrfqeldrfm
      601 hyytrfknhe lsyqleqrll ktakekmeql sralsgtegg cpdttfieda vqellktrri
      661 lkcsypygff lepkstkkei felmqtdlem vtedlaqkvn rpylrtprhk iiraaclvqq
      721 krqeflasva rgvapadspe aprrsfaggt wdweylgfas peeyaefqyr rrhrqrrrgd
      781 mhsllsntpd pddpsestld tqeggssrrh gtsmvssasm gilhssslhd ytpvsrsenq
      841 dslqalssld eddpnillai qlslqesgla ideetrdfln neaslgaigt slptrldsap
      901 isidnprgal sssellelgd slmrlgagnd pfsadrlhsh pcsetrsgly stssdadsss
      961 qdpntnenll gnimawfhdm npqsialips tstetdeesq qpstedgsag qpnltdtgle
     1021 pqeehalfed alknegrgtq teestseeni ipsetvsqig dnnrevtstl dasgdsssqt
     1081 pqtsrewteh vhlv
//
LOCUS       XP_041322607            1088 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and IBR domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322607
VERSION     XP_041322607.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466673.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1088
                     /product="ankyrin repeat and IBR domain-containing protein
                     1 isoform X2"
                     /calculated_mol_wt=122179
     Region          <14..247
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(47,51..52,55..57,59..60,65,68,77,79,81,85..86,
                     89..90,113,115..116,120,123,143,145,147,151..152,155..157,
                     159..160,164,167,176)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          47..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          79..143
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          145..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          332..389
                     /region_name="RING-HC_RBR_ANKIB1"
                     /note="RING finger, HC subclass, found in ankyrin repeat
                     and IBR domain-containing protein 1 (ANKIB1) and similar
                     proteins; cd16774"
                     /db_xref="CDD:438430"
     Region          410..488
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          509..570
                     /region_name="Rcat_RBR_ANKIB1"
                     /note="Rcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20361"
                     /db_xref="CDD:439022"
     Region          585..>703
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..1088
                     /gene="ANKIB1"
                     /coded_by="XM_041466673.1:530..3796"
                     /db_xref="GeneID:121353119"
ORIGIN      
        1 mgntttkfrk alingdenla cqiyesnpql ketldpntsy getyqhntpl hyaarhgmnr
       61 ilgtflfvrd gnpnkrnvhn etsmhllcmg pqimisegal hprltrpsed dcrradclqm
      121 ilkwkgakld egqyeraaid avdnkkntpl hyaaasgmkt cvellvkhgg dlfaenenkd
      181 tpcdcaekqh hkelalnles rmvfsrdpea esieaeyaal dkkepyeglr lqdlrrlkdm
      241 livesadmlq aplftaeall rahdwdrekl leawmcnpes ccqrsgvqmp tpppsgynaw
      301 dtlpsprtpr ttrssvtspd eispspgdme tavcdicmcn isvfedpvdm pcghdfcrac
      361 weaflnlkiq egeahnifcp aydcfqlvpv diiesvvske mdkrylqfdi kafvennpai
      421 kwcpipgcer avrltrqgsn stgsdtlsfp mlkapavdcg kghlfcwecl geahepcdcq
      481 twkdwlqkis emkpeelvgv seayedaanc lwlltnskpc anckspiqkn egcnhmqcak
      541 ckydfcwicl eewkkhssst ggyyrctrye viqhveeqsk emtveaekkh rrfqeldrfm
      601 hyytrfknhe lsyqleqrll ktakekmeql sralsgtegg cpdttfieda vqellktrri
      661 lkcsypygff lepkstkkei felmqtdlem vtedlaqkvn rpylrtprhk iiraaclvqq
      721 krqeflasva rgvapadspe aprrsfaggt wdweylgfas peyrrrhrqr rrgdmhslls
      781 ntpdpddpse stldtqeggs srrhgtsmvs sasmgilhss slhdytpvsr senqdslqal
      841 ssldeddpni llaiqlslqe sglaideetr dflnneaslg aigtslptrl dsapisidnp
      901 rgalsssell elgdslmrlg agndpfsadr lhshpcsetr sglystssda dsssqdpntn
      961 enllgnimaw fhdmnpqsia lipststetd eesqqpsted gsagqpnltd tglepqeeha
     1021 lfedalkneg rgtqteests eeniipsetv sqigdnnrev tstldasgds ssqtpqtsre
     1081 wtehvhlv
//
LOCUS       XP_041322608            1064 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and IBR domain-containing protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322608
VERSION     XP_041322608.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466674.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1064
                     /product="ankyrin repeat and IBR domain-containing protein
                     1 isoform X3"
                     /calculated_mol_wt=119732
     Region          <14..247
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(47,51..52,55..57,59..60,65,68,77,79,81,85..86,
                     89..90,113,115..116,120,123,143,145,147,151..152,155..157,
                     159..160,164,167,176)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          47..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          79..143
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          145..176
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          332..389
                     /region_name="RING-HC_RBR_ANKIB1"
                     /note="RING finger, HC subclass, found in ankyrin repeat
                     and IBR domain-containing protein 1 (ANKIB1) and similar
                     proteins; cd16774"
                     /db_xref="CDD:438430"
     Region          410..488
                     /region_name="BRcat_RBR_ANKIB1"
                     /note="BRcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20346"
                     /db_xref="CDD:439007"
     Region          509..570
                     /region_name="Rcat_RBR_ANKIB1"
                     /note="Rcat domain found in ankyrin repeat and IBR
                     domain-containing protein 1 (ANKIB1) and similar proteins;
                     cd20361"
                     /db_xref="CDD:439022"
     Region          585..>703
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..1064
                     /gene="ANKIB1"
                     /coded_by="XM_041466674.1:533..3727"
                     /db_xref="GeneID:121353119"
ORIGIN      
        1 mgntttkfrk alingdenla cqiyesnpql ketldpntsy getyqhntpl hyaarhgmnr
       61 ilgtflfvrd gnpnkrnvhn etsmhllcmg pqimisegal hprltrpsed dcrradclqm
      121 ilkwkgakld egqyeraaid avdnkkntpl hyaaasgmkt cvellvkhgg dlfaenenkd
      181 tpcdcaekqh hkelalnles rmvfsrdpea esieaeyaal dkkepyeglr lqdlrrlkdm
      241 livesadmlq aplftaeall rahdwdrekl leawmcnpes ccqrsgvqmp tpppsgynaw
      301 dtlpsprtpr ttrssvtspd eispspgdme tavcdicmcn isvfedpvdm pcghdfcrac
      361 weaflnlkiq egeahnifcp aydcfqlvpv diiesvvske mdkrylqfdi kafvennpai
      421 kwcpipgcer avrltrqgsn stgsdtlsfp mlkapavdcg kghlfcwecl geahepcdcq
      481 twkdwlqkis emkpeelvgv seayedaanc lwlltnskpc anckspiqkn egcnhmqcak
      541 ckydfcwicl eewkkhssst ggyyrctrye viqhveeqsk emtveaekkh rrfqeldrfm
      601 hyytrfknhe lsyqleqrll ktakekmeql sralsgtegg cpdttfieda vqellktrri
      661 lkcsypygff lepkstkkei felmqtdlem vtedlaqkvn rpylrtprhk iiraaclvqq
      721 krqeflasva rgvapadspe aprrsfaggt wdweylgfas peeyaefqyr rrhrqrrrgd
      781 mhsllsntpd pddpsestld tqeggssrrh gtsmalssld eddpnillai qlslqesgla
      841 ideetrdfln neaslgaigt slptrldsap isidnprgal sssellelgd slmrlgagnd
      901 pfsadrlhsh pcsetrsgly stssdadsss qdpntnenll gnimawfhdm npqsialips
      961 tstetdeesq qpstedgsag qpnltdtgle pqeehalfed alknegrgtq teestseeni
     1021 ipsetvsqig dnnrevtstl dasgdsssqt pqtsrewteh vhlv
//
LOCUS       XP_041322609             736 aa            linear   VRT 06-MAY-2021
DEFINITION  krev interaction trapped protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322609
VERSION     XP_041322609.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466675.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..736
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..736
                     /product="krev interaction trapped protein 1 isoform X1"
                     /calculated_mol_wt=84023
     Region          30..198
                     /region_name="NUDIX_5"
                     /note="NUDIX, or N-terminal NPxY motif-rich, region of
                     KRIT; pfam16705"
                     /db_xref="CDD:465241"
     Region          <291..423
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          291..318
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(293..294,297..299,301..302,306,309,318,320,322,
                     326..327,330..332,334..335,339,342,352,354,356,360..361,
                     364..366,368..369,373,376)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          320..352
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          421..640
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          636..735
                     /region_name="FERM_C_CCM1"
                     /note="FERM domain C-lobe of Cerebral cavernous
                     malformation 1; cd13197"
                     /db_xref="CDD:270018"
     Site            order(650,669,671,677)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270018"
     Site            order(681,686..689,723,727,730..731)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270018"
     Site            723..734
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270018"
     CDS             1..736
                     /gene="KRIT1"
                     /coded_by="XM_041466675.1:488..2698"
                     /db_xref="GeneID:121353120"
ORIGIN      
        1 mgnpenigda yvavirpknt aslnsreyra ksyeilllev piegqkkkrk kvlletklqg
       61 gteitqsild yvleatkpis panqgikgkr vvlmkkfpld gekagqeasl yvvptvvkdn
      121 tkytyspgcp vfyclqdimr vcsessthfa tltakmlial dkwlderhtq shsipalfrp
      181 spleriktnv inpayaiepg qtesslhmgy taleirskml alekadmciy nplfgsdlqy
      241 tnrvdkvvin pyfglgapdy skiqipkrek wqrsmssvte dkehqwvddf plhrsacegd
      301 sdllshlldk kfsvnqldsd hwapihyacw ygkveatrml lekgkcnpnl lngqlssplh
      361 faaggghaei vqillnhpei drhitdqqgr splnvceenk qneweeaakl lkeainkpye
      421 kariyrmdgs yrsvelkhgn nttvqqimeg mrlsqetqqy ftiwicsenl slqlkpyhkp
      481 lqhirdwpei fteltnldpq retsqlflrr dvrlpleiek kiedplaili lfdearynll
      541 kgfytspdak litlaslllq ivygnyeskk hkqgflneen lksivpitkl kskaphwtnr
      601 ilheyknlst segvskemhh lqrmflqncw eiptygaaff tgqiftkass sshkvikvyv
      661 gvnvkglhll nmetkallls lkygcfmwql gdgdtcfqih slenkmsfiv htkqaglvvk
      721 llmklngqlm pterne
//
LOCUS       XP_041322610             667 aa            linear   VRT 06-MAY-2021
DEFINITION  krev interaction trapped protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322610
VERSION     XP_041322610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466676.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..667
                     /product="krev interaction trapped protein 1 isoform X2"
                     /calculated_mol_wt=76270
     Region          30..198
                     /region_name="NUDIX_5"
                     /note="NUDIX, or N-terminal NPxY motif-rich, region of
                     KRIT; pfam16705"
                     /db_xref="CDD:465241"
     Region          <291..423
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          291..318
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(293..294,297..299,301..302,306,309,318,320,322,
                     326..327,330..332,334..335,339,342,352,354,356,360..361,
                     364..366,368..369,373,376)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          320..352
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          421..606
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          <604..666
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..667
                     /gene="KRIT1"
                     /coded_by="XM_041466676.1:490..2493"
                     /db_xref="GeneID:121353120"
ORIGIN      
        1 mgnpenigda yvavirpknt aslnsreyra ksyeilllev piegqkkkrk kvlletklqg
       61 gteitqsild yvleatkpis panqgikgkr vvlmkkfpld gekagqeasl yvvptvvkdn
      121 tkytyspgcp vfyclqdimr vcsessthfa tltakmlial dkwlderhtq shsipalfrp
      181 spleriktnv inpayaiepg qtesslhmgy taleirskml alekadmciy nplfgsdlqy
      241 tnrvdkvvin pyfglgapdy skiqipkrek wqrsmssvte dkehqwvddf plhrsacegd
      301 sdllshlldk kfsvnqldsd hwapihyacw ygkveatrml lekgkcnpnl lngqlssplh
      361 faaggghaei vqillnhpei drhitdqqgr splnvceenk qneweeaakl lkeainkpye
      421 kariyrmdgs yrsvelkhgn nttvqqimeg mrlsqetqqy ftiwicsenl slqlkpyhkp
      481 lqhirdwpei fteltnldpq retsqlflrr dvrlpleiek kiedplaili lfdearynll
      541 kgfytspdak litlaslllq ivygnyeskk hkqgflneen lksivpitkl kskaphwtnr
      601 ilheykalll slkygcfmwq lgdgdtcfqi hslenkmsfi vhtkqaglvv kllmklngql
      661 mpterne
//
LOCUS       XP_041322611             868 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322611
VERSION     XP_041322611.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466677.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..868
                     /product="LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
                     TRIM71"
                     /calculated_mol_wt=93597
     Region          1..98
                     /region_name="RING-HC_TRIM71_C-VII"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 71 (TRIM71) and similar proteins;
                     cd16589"
                     /db_xref="CDD:438251"
     Region          198..241
                     /region_name="Bbox1_TRIM71_C-VII"
                     /note="B-box-type 1 zinc finger found in tripartite
                     motif-containing protein 71 (TRIM71) and similar proteins;
                     cd19812"
                     /db_xref="CDD:380870"
     Region          275..322
                     /region_name="Bbox2_TRIM71_C-VII"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 71 (TRIM71) and similar proteins;
                     cd19796"
                     /db_xref="CDD:380854"
     Region          314..446
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cl29238"
                     /db_xref="CDD:475168"
     Site            order(328..329,331..333,336,339,353..354,357,360..361,
                     364..365,368,375..376,379,382..383,386..387,390,400..401,
                     404,408,411..412,415..416,418..419,427,430..431,434,
                     437..438)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467844"
     Region          482..577
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Region          584..868
                     /region_name="NHL_TRIM71_like"
                     /note="NHL repeat domain of the tripartite
                     motif-containing protein 71 (TRIM71) and related proteins;
                     cd14954"
                     /db_xref="CDD:271324"
     Region          609..648
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271324"
     Region          656..695
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271324"
     Region          703..739
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271324"
     Region          747..787
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271324"
     Region          796..826
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271324"
     Region          842..868
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271324"
     CDS             1..868
                     /gene="TRIM71"
                     /coded_by="XM_041466677.1:1..2607"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121353122"
ORIGIN      
        1 masfpesdfq icplckemcg spaplssnss tsssssqtss ssgggggssc ggpprrlhvl
       61 pclhafcrqc leaqrhpgag dalklrcpic dqkvviseps gmdalpssnf llsnlldvvv
      121 vaaaadeqkn graagagpaa gsggggnnrh hgrpxxxxxx xxprprpprr rrrpppraaa
      181 axaalllrrp hsrqgeprcs scdegnaass rcldcqehlc dncvrahqrv rltkdhfier
      241 faagpaaagp naplalsppy paspynilsv fpdrasycqh hddevlhfyc dtcsvpicre
      301 ctmgrhvghs fiylqdalqd srtltiqlla daqqgrqaiq lsieqaqava eqvemkakvv
      361 qsevkvvttr hkkaleerec ellwkvekir qvkakslylq veklrqnlnk ldntisavqq
      421 vleegrtmdi llardrmlaq vqelknvrgl lqpqeddrim ftppdqalym aiksmgfvss
      481 gafapltkat geglkralqg klasftvvgy dhdgeprlsg gdmisavvmg pdgnlfgadv
      541 sdqqngtylv syrpqlegeh lvsvmmcnqh ienspfkvmv ksgrsyigig lpglsfgseg
      601 dsdgklcrpw gvsvdkegfi ivadrsnnri qvfkpcgtfh hkfgtlgsrp gqfdrpagva
      661 cdvsrrivva dkdnhriqif tfegqfilkf gekgtkngqf nypwdvavna egkilvsdtr
      721 nhrvqlfgpd gvflnkygfe gvlwkhfdsp rgvtfnhegh lvvtdfnnhr llvihpdcqs
      781 arflgsegtg ngqflrpqgv avdqegriiv adsrnhrvqi fesngsflck fgtqgsgfgq
      841 mdrpsgiavt pdgmivvvdf gnnrilvf
//
LOCUS       XP_041322612             423 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/LRR-repeat protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322612
VERSION     XP_041322612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..423
                     /product="F-box/LRR-repeat protein 2 isoform X1"
                     /calculated_mol_wt=46843
     Region          9..53
                     /region_name="F-box_FBXL2-like"
                     /note="F-box domain found in F-box/LRR-repeat protein 2
                     (FBXL2), F-box/LRR-repeat protein 20 (FBXL20) and similar
                     proteins; cd22115"
                     /db_xref="CDD:438887"
     Site            order(9..12,14..15,18..19,22..28,31,33..40,42..43,51)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438887"
     Region          52..79
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          69..>135
                     /region_name="FBXL18_LRR"
                     /note="F-box/LRR-repeat protein 18, LRR; pfam19729"
                     /db_xref="CDD:466163"
     Region          80..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          106..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          132..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          158..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          168..364
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          184..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          210..235
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          236..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          262..287
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          288..313
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          314..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          343..367
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          368..393
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..423
                     /gene="FBXL2"
                     /coded_by="XM_041466678.1:105..1376"
                     /db_xref="GeneID:121353123"
ORIGIN      
        1 mvfsnndeal inkklpkell lrifsfldiv tlcrcaqvsk awnvlaldgs nwqridlfnf
       61 qtdiegrvve niskrcggfl rqlslrgclg vgdsslktfa qncrniehln lngctkitds
      121 tcyslsrfcs klkhldltsc vaitnsslkg lsegcrnleh lnlswcdqit kdgiealvkg
      181 csglkalflr gctqledeal khiqnhchel vilnlqsctq isdegivkic rgchrlqslc
      241 vsgcsnltda sltalglncp rlkileaarc shltdagftl larnchelek mdleecvlit
      301 dstliqlsih cpklqalsls hcelitddgi lhlsnstcgh erlqvleldn cllitdvtle
      361 hlenchnler ielydcqqvt ragikrirah lphvkvhayf apvtpppsvg gsgqrlcrcc
      421 iil
//
LOCUS       XP_041322613             318 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/LRR-repeat protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322613
VERSION     XP_041322613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="F-box/LRR-repeat protein 2 isoform X2"
                     /calculated_mol_wt=34921
     Region          27..52
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          53..78
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          63..259
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          79..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          105..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          131..156
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          157..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          183..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          209..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          238..262
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          263..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..318
                     /gene="FBXL2"
                     /coded_by="XM_041466679.1:136..1092"
                     /db_xref="GeneID:121353123"
ORIGIN      
        1 mgaqksltvc llfcstcysl srfcsklkhl dltscvaitn sslkglsegc rnlehlnlsw
       61 cdqitkdgie alvkgcsglk alflrgctql edealkhiqn hchelvilnl qsctqisdeg
      121 ivkicrgchr lqslcvsgcs nltdasltal glncprlkil eaarcshltd agftllarnc
      181 helekmdlee cvlitdstli qlsihcpklq alslshceli tddgilhlsn stcgherlqv
      241 leldncllit dvtlehlenc hnlerielyd cqqvtragik rirahlphvk vhayfapvtp
      301 ppsvggsgqr lcrcciil
//
LOCUS       XP_041322615             651 aa            linear   VRT 06-MAY-2021
DEFINITION  anoctamin-10 [Pyrgilauda ruficollis].
ACCESSION   XP_041322615
VERSION     XP_041322615.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466681.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..651
                     /product="anoctamin-10"
                     /calculated_mol_wt=75364
     Region          202..628
                     /region_name="Anoctamin"
                     /note="Calcium-activated chloride channel; pfam04547"
                     /db_xref="CDD:461349"
     CDS             1..651
                     /gene="ANO10"
                     /coded_by="XM_041466681.1:135..2090"
                     /db_xref="GeneID:121353124"
ORIGIN      
        1 magkakemve swsfldtaes nfrplvviel akgtkeetie wftkrivdkk anggaqllik
       61 plvtengven iylvgashlr lllgaetvgl vkecsdnsmr tftyssrktf khfaddnhnf
      121 ltmaecqyii khelenlrak dekmipgypq aklypgksiv rrlltsgilv qifplhdree
      181 lkklshswyg rvkigyqpld dircyfgeti alyfgfleyf tfalipmavi gipyyvfawe
      241 dydkyvmfat fnllwstvil evwkricail tyrwgtllmk rqfeeprpgf hgvlginpvt
      301 greepvyssi krqlriylvs lpfvclclyf slyvmmiyfd leqwaldyhk enesnfsslm
      361 lyvpsiiyav vievmnriyr yaaefltswe nhrlessyqn hlilkvlvfn flncfaslfy
      421 iafvlfdmkl lrqslatlli tsqilnqfae sllpywlqkr ynrrmkkrts skgadmdlsl
      481 aeqvnmekem gtylgtfddy lelflqfgyv slfscvypla avfavlnnit eiysdalkmc
      541 rvykrpfaep tanigvwqla fetmsvisvv tnciligmsp evdalfpdsk mdlvltvalv
      601 ehlllaikfi mafvipdkpr diqmklakle feslealkqq qmklaaeslk e
//
LOCUS       XP_041322616            1529 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322616
VERSION     XP_041322616.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466682.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1529
                     /product="cyclin-dependent kinase 13 isoform X1"
                     /calculated_mol_wt=167251
     Region          674..975
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,728,742,768..771,774,776..777,
                     814,816,818..819,821,832,835,848,850..853,855,893..894)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,742,768..771,774,777,818..819,
                     821,832)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(720..722,724,727,731,734,744..747,749,764)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(728,776,814,816,835,848,850..853,855,893..894)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(831..843,845..855)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1529
                     /gene="CDK13"
                     /coded_by="XM_041466682.1:143..4732"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 sslrenlsvk svketekklr hlladlplpp elpggaevpk speekkpavq lhskrrpkic
      661 gprhgetkek eidwgkrcvd kfdiigiige gtygqvykar dkdtgemval kkvrldneke
      721 gfpitairei kilrqlnhqs iinmkeivtd kedaldfkkd kgafylvfey mdhdlmglle
      781 sglvhfnenh iksfmrqlme glaychkknf lhrdikcsni llnnrgqikl adfglarlyn
      841 seesrpytnk vitlwyrppe lllgeerytp aidvwscgci lgelftkkpi fqanqelaql
      901 elisricgsp cpavwpdvik layfntmkpk kqyrrklree fafippaald lfdymlaldp
      961 skrctaeqal qceflrdvep skmpppdlpl wqdchelwsk krrrqkqmgm tddstaakvp
     1021 rkdlslgmde srtntpqgmq tssqlktqgs ssvalaktst gqqlnqneva illnllqskt
     1081 svslaqfaqv lnikvnpetq qqlnkinlpa gilsagekqs eqqqqqqppp ppppppeqep
     1141 lkqpmvtqpp vppaqlgqpk vetdaaqaav qsafavlfsq likaqqtkqk dfvleekeng
     1201 sgnemslqlr qppepatpvs vsrddvespa pgyphviksl ymsagqedlv rqsemrhlnr
     1261 tpeqerpril ppdqrppepp epppltdedl dyrtenqhlp isnssgadph agvkaallql
     1321 laqhqaqatt eepvqtsvdy qardsyvtgp dykdnfgsss fssacystsd gigsgssgvl
     1381 errsflgnsd iqsldnysta sshsgaappp safpesfpss vtgygdiyln agpmlfsgdk
     1441 dhrfeyshgp ipvlgsssda stgpesahsl ptkmhnysyg snlqenptgi shmhgqtwts
     1501 paqgpgysqg yrghistsav rgrgrglpy
//
LOCUS       XP_041322617            1528 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322617
VERSION     XP_041322617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466683.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1528
                     /product="cyclin-dependent kinase 13 isoform X2"
                     /calculated_mol_wt=167164
     Region          673..974
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(687..690,695,708,710,727,741,767..770,773,775..776,
                     813,815,817..818,820,831,834,847,849..852,854,892..893)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(687..690,695,708,710,741,767..770,773,776,817..818,
                     820,831)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(719..721,723,726,730,733,743..746,748,763)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(727,775,813,815,834,847,849..852,854,892..893)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(830..842,844..854)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1528
                     /gene="CDK13"
                     /coded_by="XM_041466683.1:143..4729"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 slrenlsvks vketekklrh lladlplppe lpggaevpks peekkpavql hskrrpkicg
      661 prhgetkeke idwgkrcvdk fdiigiigeg tygqvykard kdtgemvalk kvrldnekeg
      721 fpitaireik ilrqlnhqsi inmkeivtdk edaldfkkdk gafylvfeym dhdlmglles
      781 glvhfnenhi ksfmrqlmeg laychkknfl hrdikcsnil lnnrgqikla dfglarlyns
      841 eesrpytnkv itlwyrppel llgeerytpa idvwscgcil gelftkkpif qanqelaqle
      901 lisricgspc pavwpdvikl ayfntmkpkk qyrrklreef afippaaldl fdymlaldps
      961 krctaeqalq ceflrdveps kmpppdlplw qdchelwskk rrrqkqmgmt ddstaakvpr
     1021 kdlslgmdes rtntpqgmqt ssqlktqgss svalaktstg qqlnqnevai llnllqskts
     1081 vslaqfaqvl nikvnpetqq qlnkinlpag ilsagekqse qqqqqqpppp pppppeqepl
     1141 kqpmvtqppv ppaqlgqpkv etdaaqaavq safavlfsql ikaqqtkqkd fvleekengs
     1201 gnemslqlrq ppepatpvsv srddvespap gyphviksly msagqedlvr qsemrhlnrt
     1261 peqerprilp pdqrppeppe pppltdedld yrtenqhlpi snssgadpha gvkaallqll
     1321 aqhqaqatte epvqtsvdyq ardsyvtgpd ykdnfgsssf ssacystsdg igsgssgvle
     1381 rrsflgnsdi qsldnystas shsgaappps afpesfpssv tgygdiylna gpmlfsgdkd
     1441 hrfeyshgpi pvlgsssdas tgpesahslp tkmhnysygs nlqenptgis hmhgqtwtsp
     1501 aqgpgysqgy rghistsavr grgrglpy
//
LOCUS       XP_041322618            1511 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322618
VERSION     XP_041322618.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466684.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1511
                     /product="cyclin-dependent kinase 13 isoform X3"
                     /calculated_mol_wt=165459
     Region          674..975
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,728,742,768..771,774,776..777,
                     814,816,818..819,821,832,835,848,850..853,855,893..894)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,742,768..771,774,777,818..819,
                     821,832)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(720..722,724,727,731,734,744..747,749,764)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(728,776,814,816,835,848,850..853,855,893..894)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(831..843,845..855)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1511
                     /gene="CDK13"
                     /coded_by="XM_041466684.1:143..4678"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 sslrenlsvk svketekklr hlladlplpp elpggaevpk speekkpavq lhskrrpkic
      661 gprhgetkek eidwgkrcvd kfdiigiige gtygqvykar dkdtgemval kkvrldneke
      721 gfpitairei kilrqlnhqs iinmkeivtd kedaldfkkd kgafylvfey mdhdlmglle
      781 sglvhfnenh iksfmrqlme glaychkknf lhrdikcsni llnnrgqikl adfglarlyn
      841 seesrpytnk vitlwyrppe lllgeerytp aidvwscgci lgelftkkpi fqanqelaql
      901 elisricgsp cpavwpdvik layfntmkpk kqyrrklree fafippaald lfdymlaldp
      961 skrctaeqal qceflrdvep skmpppdlpl wqdchelwsk krrrqkqmgm tddstaakvp
     1021 rkdlslgmde srtntpqakt stgqqlnqne vaillnllqs ktsvslaqfa qvlnikvnpe
     1081 tqqqlnkinl pagilsagek qseqqqqqqp ppppppppeq eplkqpmvtq ppvppaqlgq
     1141 pkvetdaaqa avqsafavlf sqlikaqqtk qkdfvleeke ngsgnemslq lrqppepatp
     1201 vsvsrddves papgyphvik slymsagqed lvrqsemrhl nrtpeqerpr ilppdqrppe
     1261 ppepppltde dldyrtenqh lpisnssgad phagvkaall qllaqhqaqa tteepvqtsv
     1321 dyqardsyvt gpdykdnfgs ssfssacyst sdgigsgssg vlerrsflgn sdiqsldnys
     1381 tasshsgaap ppsafpesfp ssvtgygdiy lnagpmlfsg dkdhrfeysh gpipvlgsss
     1441 dastgpesah slptkmhnys ygsnlqenpt gishmhgqtw tspaqgpgys qgyrghists
     1501 avrgrgrglp y
//
LOCUS       XP_041322619            1470 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322619
VERSION     XP_041322619.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466685.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1470
                     /product="cyclin-dependent kinase 13 isoform X4"
                     /calculated_mol_wt=160897
     Region          674..975
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,728,742,768..771,774,776..777,
                     814,816,818..819,821,832,835,848,850..853,855,893..894)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,742,768..771,774,777,818..819,
                     821,832)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(720..722,724,727,731,734,744..747,749,764)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(728,776,814,816,835,848,850..853,855,893..894)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(831..843,845..855)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1470
                     /gene="CDK13"
                     /coded_by="XM_041466685.1:143..4555"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 sslrenlsvk svketekklr hlladlplpp elpggaevpk speekkpavq lhskrrpkic
      661 gprhgetkek eidwgkrcvd kfdiigiige gtygqvykar dkdtgemval kkvrldneke
      721 gfpitairei kilrqlnhqs iinmkeivtd kedaldfkkd kgafylvfey mdhdlmglle
      781 sglvhfnenh iksfmrqlme glaychkknf lhrdikcsni llnnrgqikl adfglarlyn
      841 seesrpytnk vitlwyrppe lllgeerytp aidvwscgci lgelftkkpi fqanqelaql
      901 elisricgsp cpavwpdvik layfntmkpk kqyrrklree fafippaald lfdymlaldp
      961 skrctaeqal qceflrdvep skmpppdlpl wqdchelwsk krrrqkqmgm tddstaakvp
     1021 rkdlslgmde srtntpqgmq tssqlktqgs ssvalagekq seqqqqqqpp pppppppeqe
     1081 plkqpmvtqp pvppaqlgqp kvetdaaqaa vqsafavlfs qlikaqqtkq kdfvleeken
     1141 gsgnemslql rqppepatpv svsrddvesp apgyphviks lymsagqedl vrqsemrhln
     1201 rtpeqerpri lppdqrppep pepppltded ldyrtenqhl pisnssgadp hagvkaallq
     1261 llaqhqaqat teepvqtsvd yqardsyvtg pdykdnfgss sfssacysts dgigsgssgv
     1321 lerrsflgns diqsldnyst asshsgaapp psafpesfps svtgygdiyl nagpmlfsgd
     1381 kdhrfeyshg pipvlgsssd astgpesahs lptkmhnysy gsnlqenptg ishmhgqtwt
     1441 spaqgpgysq gyrghistsa vrgrgrglpy
//
LOCUS       XP_041322620            1469 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322620
VERSION     XP_041322620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1469
                     /product="cyclin-dependent kinase 13 isoform X5"
                     /calculated_mol_wt=160826
     Region          674..975
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,728,742,768..771,774,776..777,
                     814,816,818..819,821,832,835,848,850..853,855,893..894)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,742,768..771,774,777,818..819,
                     821,832)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(720..722,724,727,731,734,744..747,749,764)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(728,776,814,816,835,848,850..853,855,893..894)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(831..843,845..855)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1469
                     /gene="CDK13"
                     /coded_by="XM_041466686.1:143..4552"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 sslrenlsvk svketekklr hlladlplpp elpggaevpk speekkpavq lhskrrpkic
      661 gprhgetkek eidwgkrcvd kfdiigiige gtygqvykar dkdtgemval kkvrldneke
      721 gfpitairei kilrqlnhqs iinmkeivtd kedaldfkkd kgafylvfey mdhdlmglle
      781 sglvhfnenh iksfmrqlme glaychkknf lhrdikcsni llnnrgqikl adfglarlyn
      841 seesrpytnk vitlwyrppe lllgeerytp aidvwscgci lgelftkkpi fqanqelaql
      901 elisricgsp cpavwpdvik layfntmkpk kqyrrklree fafippaald lfdymlaldp
      961 skrctaeqal qceflrdvep skmpppdlpl wqdchelwsk krrrqkqmgm tddstaakvp
     1021 rkdlslgmde srtntpqgmq tssqlktqgs ssvalgekqs eqqqqqqppp ppppppeqep
     1081 lkqpmvtqpp vppaqlgqpk vetdaaqaav qsafavlfsq likaqqtkqk dfvleekeng
     1141 sgnemslqlr qppepatpvs vsrddvespa pgyphviksl ymsagqedlv rqsemrhlnr
     1201 tpeqerpril ppdqrppepp epppltdedl dyrtenqhlp isnssgadph agvkaallql
     1261 laqhqaqatt eepvqtsvdy qardsyvtgp dykdnfgsss fssacystsd gigsgssgvl
     1321 errsflgnsd iqsldnysta sshsgaappp safpesfpss vtgygdiyln agpmlfsgdk
     1381 dhrfeyshgp ipvlgsssda stgpesahsl ptkmhnysyg snlqenptgi shmhgqtwts
     1441 paqgpgysqg yrghistsav rgrgrglpy
//
LOCUS       XP_041322621            1468 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322621
VERSION     XP_041322621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1468
                     /product="cyclin-dependent kinase 13 isoform X6"
                     /calculated_mol_wt=160739
     Region          673..974
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(687..690,695,708,710,727,741,767..770,773,775..776,
                     813,815,817..818,820,831,834,847,849..852,854,892..893)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(687..690,695,708,710,741,767..770,773,776,817..818,
                     820,831)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(719..721,723,726,730,733,743..746,748,763)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(727,775,813,815,834,847,849..852,854,892..893)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(830..842,844..854)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1468
                     /gene="CDK13"
                     /coded_by="XM_041466687.1:143..4549"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 slrenlsvks vketekklrh lladlplppe lpggaevpks peekkpavql hskrrpkicg
      661 prhgetkeke idwgkrcvdk fdiigiigeg tygqvykard kdtgemvalk kvrldnekeg
      721 fpitaireik ilrqlnhqsi inmkeivtdk edaldfkkdk gafylvfeym dhdlmglles
      781 glvhfnenhi ksfmrqlmeg laychkknfl hrdikcsnil lnnrgqikla dfglarlyns
      841 eesrpytnkv itlwyrppel llgeerytpa idvwscgcil gelftkkpif qanqelaqle
      901 lisricgspc pavwpdvikl ayfntmkpkk qyrrklreef afippaaldl fdymlaldps
      961 krctaeqalq ceflrdveps kmpppdlplw qdchelwskk rrrqkqmgmt ddstaakvpr
     1021 kdlslgmdes rtntpqgmqt ssqlktqgss svalgekqse qqqqqqpppp pppppeqepl
     1081 kqpmvtqppv ppaqlgqpkv etdaaqaavq safavlfsql ikaqqtkqkd fvleekengs
     1141 gnemslqlrq ppepatpvsv srddvespap gyphviksly msagqedlvr qsemrhlnrt
     1201 peqerprilp pdqrppeppe pppltdedld yrtenqhlpi snssgadpha gvkaallqll
     1261 aqhqaqatte epvqtsvdyq ardsyvtgpd ykdnfgsssf ssacystsdg igsgssgvle
     1321 rrsflgnsdi qsldnystas shsgaappps afpesfpssv tgygdiylna gpmlfsgdkd
     1381 hrfeyshgpi pvlgsssdas tgpesahslp tkmhnysygs nlqenptgis hmhgqtwtsp
     1441 aqgpgysqgy rghistsavr grgrglpy
//
LOCUS       XP_041322622            1451 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041322622
VERSION     XP_041322622.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466688.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1451
                     /product="cyclin-dependent kinase 13 isoform X7"
                     /calculated_mol_wt=159034
     Region          674..975
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,728,742,768..771,774,776..777,
                     814,816,818..819,821,832,835,848,850..853,855,893..894)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,742,768..771,774,777,818..819,
                     821,832)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(720..722,724,727,731,734,744..747,749,764)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(728,776,814,816,835,848,850..853,855,893..894)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(831..843,845..855)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1451
                     /gene="CDK13"
                     /coded_by="XM_041466688.1:143..4498"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 sslrenlsvk svketekklr hlladlplpp elpggaevpk speekkpavq lhskrrpkic
      661 gprhgetkek eidwgkrcvd kfdiigiige gtygqvykar dkdtgemval kkvrldneke
      721 gfpitairei kilrqlnhqs iinmkeivtd kedaldfkkd kgafylvfey mdhdlmglle
      781 sglvhfnenh iksfmrqlme glaychkknf lhrdikcsni llnnrgqikl adfglarlyn
      841 seesrpytnk vitlwyrppe lllgeerytp aidvwscgci lgelftkkpi fqanqelaql
      901 elisricgsp cpavwpdvik layfntmkpk kqyrrklree fafippaald lfdymlaldp
      961 skrctaeqal qceflrdvep skmpppdlpl wqdchelwsk krrrqkqmgm tddstaakvp
     1021 rkdlslgmde srtntpqgek qseqqqqqqp ppppppppeq eplkqpmvtq ppvppaqlgq
     1081 pkvetdaaqa avqsafavlf sqlikaqqtk qkdfvleeke ngsgnemslq lrqppepatp
     1141 vsvsrddves papgyphvik slymsagqed lvrqsemrhl nrtpeqerpr ilppdqrppe
     1201 ppepppltde dldyrtenqh lpisnssgad phagvkaall qllaqhqaqa tteepvqtsv
     1261 dyqardsyvt gpdykdnfgs ssfssacyst sdgigsgssg vlerrsflgn sdiqsldnys
     1321 tasshsgaap ppsafpesfp ssvtgygdiy lnagpmlfsg dkdhrfeysh gpipvlgsss
     1381 dastgpesah slptkmhnys ygsnlqenpt gishmhgqtw tspaqgpgys qgyrghists
     1441 avrgrgrglp y
//
LOCUS       XP_041322623            1340 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 13 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041322623
VERSION     XP_041322623.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466689.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1340
                     /product="cyclin-dependent kinase 13 isoform X8"
                     /calculated_mol_wt=146819
     Region          674..975
                     /region_name="STKc_CDK12"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 12; cd07864"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,728,742,768..771,774,776..777,
                     814,816,818..819,821,832,835,848,850..853,855,893..894)
                     /site_type="active"
                     /db_xref="CDD:270847"
     Site            order(688..691,696,709,711,742,768..771,774,777,818..819,
                     821,832)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270847"
     Site            order(720..722,724,727,731,734,744..747,749,764)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270847"
     Site            order(728,776,814,816,835,848,850..853,855,893..894)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270847"
     Site            order(831..843,845..855)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270847"
     CDS             1..1340
                     /gene="CDK13"
                     /coded_by="XM_041466689.1:143..4165"
                     /db_xref="GeneID:121353125"
ORIGIN      
        1 mpstsdaaag gsggsrgwgs ggggstavea aadkkrlhhr rrkrfaaqpq ppppaphpll
       61 fpllqppllq ppllqpplpp qsllflaatg assccgdgge rkrprgkrrs gsrhkrrrgr
      121 ggggggtqea ekrrgtggls tlveeyddvs sqsegllgsg aagggsgggs pgsssgggtq
      181 rqrgeaersg rsrrehrgss grskerhreh rrrgeekaqq egtaapgrga sepssssksr
      241 srhnhtgsqd reglkssssg ggsdgrrkgs lsspsssrkd reskshrsrt ktakeppsay
      301 kdppkayrdd klepkayrrq rsspspgrdd spplhrssqs qrsrkslspv garsplspys
      361 rrrspsysrh ssyerggdvs pspysswrrs rspyspvirr saksrsrspy ssrhsrsrsr
      421 hrlsrsrsrh ssispstltl ksslaaelnk nkkaraaeaa kasakasnts tptkgntdta
      481 vsapqvnnvk dlkkikteht psptsganlk ndkakakvsl petkaennli adkvtkqkpa
      541 vvkenkltvv kqqpvpvkek skpstpsvva kekdrivalp tstlpplplp ptlpedketd
      601 sslrenlsvk svketekklr hlladlplpp elpggaevpk speekkpavq lhskrrpkic
      661 gprhgetkek eidwgkrcvd kfdiigiige gtygqvykar dkdtgemval kkvrldneke
      721 gfpitairei kilrqlnhqs iinmkeivtd kedaldfkkd kgafylvfey mdhdlmglle
      781 sglvhfnenh iksfmrqlme glaychkknf lhrdikcsni llnnrgqikl adfglarlyn
      841 seesrpytnk vitlwyrppe lllgeerytp aidvwscgci lgelftkkpi fqanqelaql
      901 elisricgsp cpavwpdvik layfntmkpk kqyrrklree fafippaald lfdymlaldp
      961 skrctaeqal qceflrdvep skmpppdlpl wqdchelwsk krrrqkqmgm tddstaakvp
     1021 rkdlslgmde srtntpqgmq tssqlktqgs ssvalgqedl vrqsemrhln rtpeqerpri
     1081 lppdqrppep pepppltded ldyrtenqhl pisnssgadp hagvkaallq llaqhqaqat
     1141 teepvqtsvd yqardsyvtg pdykdnfgss sfssacysts dgigsgssgv lerrsflgns
     1201 diqsldnyst asshsgaapp psafpesfps svtgygdiyl nagpmlfsgd kdhrfeyshg
     1261 pipvlgsssd astgpesahs lptkmhnysy gsnlqenptg ishmhgqtwt spaqgpgysq
     1321 gyrghistsa vrgrgrglpy
//
LOCUS       XP_041322625             768 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin beta-8 [Pyrgilauda ruficollis].
ACCESSION   XP_041322625
VERSION     XP_041322625.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466691.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..768
                     /product="integrin beta-8"
                     /calculated_mol_wt=84956
     Region          55..470
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     CDS             1..768
                     /gene="ITGB8"
                     /coded_by="XM_041466691.1:420..2726"
                     /db_xref="GeneID:121353126"
ORIGIN      
        1 mmwvpllacl tagivsvprc qrgpgtflga arllaavpgl cqrsenrcat snavtctkcl
       61 algpecgwca qedfmagttq kgrcdtvfnl mkrgcqsdlv enptvhvtip sdhetntqvt
      121 pgkvsvqlrp gseanfmlkv rplekypvdl yylvdvsasm hnnieklnsv gfalskkmen
      181 isldfrlgfg syvdktvspy isihpgrihn qcsdynldcm pphgyihvls ltdniaefrn
      241 avnkqkisgn idtpeggfda mlqaavcqsh igwrkeakrl llvmtdqtsh laldsklagi
      301 viphdgnchl kdnvyikats mehpslgqls eklidnninv ifavqgsqfh wykdllpllp
      361 gtvarqiesq aanlndlvve ayqklisevk iqvdnqiqgl hfnitaicpd gskktgmegc
      421 knvgynkevl fnvsvtmkgc httggrkyvi lkpigfneta ivnvqqscac qygdstghkr
      481 vwaeetspds kqspcsdsnc gsnrdtlpse kcrqhqdqpi csgqgncidg kcfcfknklg
      541 kvygkycemd dfscpyhqgn lcsgngeceg gkckcfagwe gdrcecssqs akhclnskgq
      601 icsgrgkcvc gkcectdprs fgrfceycpt cnkaceenwn cvqcyhsnna sqvildqctt
      661 sctyllhyid ntsdcfsgrn yfrvfsiifi vtfligllvv liirqiilqg ssnkvksssd
      721 yrvsttkkdk mflptvctrt vtyrrdkpee inidicklrl netfkcef
//
LOCUS       XP_041322626             578 aa            linear   VRT 06-MAY-2021
DEFINITION  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322626
VERSION     XP_041322626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="protein O-linked-mannose
                     beta-1,4-N-acetylglucosaminyltransferase 2"
                     /calculated_mol_wt=66471
     Region          <290..389
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..578
                     /gene="POMGNT2"
                     /coded_by="XM_041466692.1:455..2191"
                     /db_xref="GeneID:121353128"
ORIGIN      
        1 mniaavfnal lvsilaavlw kyiklcdhaa tveeelvlmr qsqelseaqi dyhaalqalv
       61 engtrmvctg rmhtdricrf eslcysteae efvyfhsnss vmlpnlgsrr fqpalldlss
      121 vedhntqyfn fvelpaaalk fmpkpvfvpd valianrfnp dnlmhvfhdd llpiyytmqq
      181 fsdldlearl ffmegwsegv hfdlykllsn kqpllreelk tlgrllcftk syvglskitt
      241 wyqygfvqpq gpkanilvsg neirqftkfm mqklnislee ssseeyivvf srtinrliln
      301 eaelilalaq efqmktisvs leehsfsdiv rlisnasmlv smhgaqlvms lflprgatvv
      361 elfpyainpe hytpyktlat lpgmdlhyia wqntdredtv typdrpwdqg giahldkaeq
      421 eriikstevp rhlccrnpew lfrayqdtkv nipslihvir qtvkskpgpk kqkwsgslyp
      481 gkvrdakcqa svqgtseakl avswqipwnl rylkvrevky evwiqeqgen tympyilshq
      541 nhtfsenikp ftiylvwirc ifnknllgpf advllcst
//
LOCUS       XP_041322627             578 aa            linear   VRT 06-MAY-2021
DEFINITION  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322627
VERSION     XP_041322627.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466693.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="protein O-linked-mannose
                     beta-1,4-N-acetylglucosaminyltransferase 2"
                     /calculated_mol_wt=66471
     Region          <290..389
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..578
                     /gene="POMGNT2"
                     /coded_by="XM_041466693.1:301..2037"
                     /db_xref="GeneID:121353128"
ORIGIN      
        1 mniaavfnal lvsilaavlw kyiklcdhaa tveeelvlmr qsqelseaqi dyhaalqalv
       61 engtrmvctg rmhtdricrf eslcysteae efvyfhsnss vmlpnlgsrr fqpalldlss
      121 vedhntqyfn fvelpaaalk fmpkpvfvpd valianrfnp dnlmhvfhdd llpiyytmqq
      181 fsdldlearl ffmegwsegv hfdlykllsn kqpllreelk tlgrllcftk syvglskitt
      241 wyqygfvqpq gpkanilvsg neirqftkfm mqklnislee ssseeyivvf srtinrliln
      301 eaelilalaq efqmktisvs leehsfsdiv rlisnasmlv smhgaqlvms lflprgatvv
      361 elfpyainpe hytpyktlat lpgmdlhyia wqntdredtv typdrpwdqg giahldkaeq
      421 eriikstevp rhlccrnpew lfrayqdtkv nipslihvir qtvkskpgpk kqkwsgslyp
      481 gkvrdakcqa svqgtseakl avswqipwnl rylkvrevky evwiqeqgen tympyilshq
      541 nhtfsenikp ftiylvwirc ifnknllgpf advllcst
//
LOCUS       XP_041322628             578 aa            linear   VRT 06-MAY-2021
DEFINITION  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322628
VERSION     XP_041322628.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466694.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="protein O-linked-mannose
                     beta-1,4-N-acetylglucosaminyltransferase 2"
                     /calculated_mol_wt=66471
     Region          <290..389
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..578
                     /gene="POMGNT2"
                     /coded_by="XM_041466694.1:294..2030"
                     /db_xref="GeneID:121353128"
ORIGIN      
        1 mniaavfnal lvsilaavlw kyiklcdhaa tveeelvlmr qsqelseaqi dyhaalqalv
       61 engtrmvctg rmhtdricrf eslcysteae efvyfhsnss vmlpnlgsrr fqpalldlss
      121 vedhntqyfn fvelpaaalk fmpkpvfvpd valianrfnp dnlmhvfhdd llpiyytmqq
      181 fsdldlearl ffmegwsegv hfdlykllsn kqpllreelk tlgrllcftk syvglskitt
      241 wyqygfvqpq gpkanilvsg neirqftkfm mqklnislee ssseeyivvf srtinrliln
      301 eaelilalaq efqmktisvs leehsfsdiv rlisnasmlv smhgaqlvms lflprgatvv
      361 elfpyainpe hytpyktlat lpgmdlhyia wqntdredtv typdrpwdqg giahldkaeq
      421 eriikstevp rhlccrnpew lfrayqdtkv nipslihvir qtvkskpgpk kqkwsgslyp
      481 gkvrdakcqa svqgtseakl avswqipwnl rylkvrevky evwiqeqgen tympyilshq
      541 nhtfsenikp ftiylvwirc ifnknllgpf advllcst
//
LOCUS       XP_041322629             578 aa            linear   VRT 06-MAY-2021
DEFINITION  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322629
VERSION     XP_041322629.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466695.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="protein O-linked-mannose
                     beta-1,4-N-acetylglucosaminyltransferase 2"
                     /calculated_mol_wt=66471
     Region          <290..389
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..578
                     /gene="POMGNT2"
                     /coded_by="XM_041466695.1:146..1882"
                     /db_xref="GeneID:121353128"
ORIGIN      
        1 mniaavfnal lvsilaavlw kyiklcdhaa tveeelvlmr qsqelseaqi dyhaalqalv
       61 engtrmvctg rmhtdricrf eslcysteae efvyfhsnss vmlpnlgsrr fqpalldlss
      121 vedhntqyfn fvelpaaalk fmpkpvfvpd valianrfnp dnlmhvfhdd llpiyytmqq
      181 fsdldlearl ffmegwsegv hfdlykllsn kqpllreelk tlgrllcftk syvglskitt
      241 wyqygfvqpq gpkanilvsg neirqftkfm mqklnislee ssseeyivvf srtinrliln
      301 eaelilalaq efqmktisvs leehsfsdiv rlisnasmlv smhgaqlvms lflprgatvv
      361 elfpyainpe hytpyktlat lpgmdlhyia wqntdredtv typdrpwdqg giahldkaeq
      421 eriikstevp rhlccrnpew lfrayqdtkv nipslihvir qtvkskpgpk kqkwsgslyp
      481 gkvrdakcqa svqgtseakl avswqipwnl rylkvrevky evwiqeqgen tympyilshq
      541 nhtfsenikp ftiylvwirc ifnknllgpf advllcst
//
LOCUS       XP_041322630             578 aa            linear   VRT 06-MAY-2021
DEFINITION  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322630
VERSION     XP_041322630.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466696.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="protein O-linked-mannose
                     beta-1,4-N-acetylglucosaminyltransferase 2"
                     /calculated_mol_wt=66471
     Region          <290..389
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..578
                     /gene="POMGNT2"
                     /coded_by="XM_041466696.1:239..1975"
                     /db_xref="GeneID:121353128"
ORIGIN      
        1 mniaavfnal lvsilaavlw kyiklcdhaa tveeelvlmr qsqelseaqi dyhaalqalv
       61 engtrmvctg rmhtdricrf eslcysteae efvyfhsnss vmlpnlgsrr fqpalldlss
      121 vedhntqyfn fvelpaaalk fmpkpvfvpd valianrfnp dnlmhvfhdd llpiyytmqq
      181 fsdldlearl ffmegwsegv hfdlykllsn kqpllreelk tlgrllcftk syvglskitt
      241 wyqygfvqpq gpkanilvsg neirqftkfm mqklnislee ssseeyivvf srtinrliln
      301 eaelilalaq efqmktisvs leehsfsdiv rlisnasmlv smhgaqlvms lflprgatvv
      361 elfpyainpe hytpyktlat lpgmdlhyia wqntdredtv typdrpwdqg giahldkaeq
      421 eriikstevp rhlccrnpew lfrayqdtkv nipslihvir qtvkskpgpk kqkwsgslyp
      481 gkvrdakcqa svqgtseakl avswqipwnl rylkvrevky evwiqeqgen tympyilshq
      541 nhtfsenikp ftiylvwirc ifnknllgpf advllcst
//
LOCUS       XP_041322631             578 aa            linear   VRT 06-MAY-2021
DEFINITION  protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322631
VERSION     XP_041322631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="protein O-linked-mannose
                     beta-1,4-N-acetylglucosaminyltransferase 2"
                     /calculated_mol_wt=66471
     Region          <290..389
                     /region_name="Glyco_transf_61"
                     /note="Glycosyltransferase 61; cl15705"
                     /db_xref="CDD:472831"
     CDS             1..578
                     /gene="POMGNT2"
                     /coded_by="XM_041466697.1:430..2166"
                     /db_xref="GeneID:121353128"
ORIGIN      
        1 mniaavfnal lvsilaavlw kyiklcdhaa tveeelvlmr qsqelseaqi dyhaalqalv
       61 engtrmvctg rmhtdricrf eslcysteae efvyfhsnss vmlpnlgsrr fqpalldlss
      121 vedhntqyfn fvelpaaalk fmpkpvfvpd valianrfnp dnlmhvfhdd llpiyytmqq
      181 fsdldlearl ffmegwsegv hfdlykllsn kqpllreelk tlgrllcftk syvglskitt
      241 wyqygfvqpq gpkanilvsg neirqftkfm mqklnislee ssseeyivvf srtinrliln
      301 eaelilalaq efqmktisvs leehsfsdiv rlisnasmlv smhgaqlvms lflprgatvv
      361 elfpyainpe hytpyktlat lpgmdlhyia wqntdredtv typdrpwdqg giahldkaeq
      421 eriikstevp rhlccrnpew lfrayqdtkv nipslihvir qtvkskpgpk kqkwsgslyp
      481 gkvrdakcqa svqgtseakl avswqipwnl rylkvrevky evwiqeqgen tympyilshq
      541 nhtfsenikp ftiylvwirc ifnknllgpf advllcst
//
LOCUS       XP_041322632             364 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A10 [Pyrgilauda ruficollis].
ACCESSION   XP_041322632
VERSION     XP_041322632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..364
                     /product="homeobox protein Hox-A10"
                     /calculated_mol_wt=39294
     Region          291..347
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..364
                     /gene="HOXA10"
                     /coded_by="XM_041466698.1:36..1130"
                     /db_xref="GeneID:121353129"
ORIGIN      
        1 msarkgyllp spnysttmsc sespaansfl vdslissgrg eaagaggggg ggggyypnsg
       61 iylpqasdls yglqscglfp vlgkrnegts qsmvpnshsy vsgmevwldp prscrmeepe
      121 sqqatscsfa tsikeessyc lydsekcpkg saatdlapfp rlsaevspas sgggvpvpgy
      181 frlsqaygts knygagpaga apfppqppgr fqtppslppv pdperkedee rspsplacvs
      241 qredetqass staeelspap sesskaspek epvgnskgen aanwltaksg rkkrcpytkh
      301 qtlelekefl fnmyltrerr leisrtvhlt drqvkiwfqn rrmklkkmnr enrireltan
      361 fnfs
//
LOCUS       XP_041322633             680 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding mitochondrial carrier protein Aralar2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322633
VERSION     XP_041322633.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466699.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..680
                     /product="calcium-binding mitochondrial carrier protein
                     Aralar2 isoform X1"
                     /calculated_mol_wt=74625
     Region          17..122
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          96..>165
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cl28896"
                     /db_xref="CDD:333716"
     Region          96..121
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          333..426
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          428..517
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          520..612
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..680
                     /gene="SLC25A13"
                     /coded_by="XM_041466699.1:273..2315"
                     /db_xref="GeneID:121353131"
ORIGIN      
        1 mlskeydkev altkradpae lkaiflkyas vekngefyms pndfvtrylk iigdglpnas
       61 tvqllagvvd qtkdglisfq efvafesvlc apdalfivaf qlfdktgkge vtfedakqvf
      121 gqttihqhip fnwnsefvql hfgkdrkrhl tyaeftqfll eiqlehakqa fvqrdnaqsg
      181 rvtamdfrdi mvtirphmlt pfveeclvaa aggttshqvs fsyfngfnsl lnnmelirki
      241 ystlagnrkd vevtkeefvl aaqkfgqvtp mevdilfqla dlyeprgrmt ladieriapl
      301 eegtlpynla eaqrqkasgd vsrpvliqia esayrfalgs vagavgatav ypidlvktrm
      361 qnqrstgsfv gelmyknsfd cfkkvlryeg ffglyrgllp qllgvapeka ikltvndfvr
      421 dkfrtkdgsv plaaeilagg caggsqvift npleivkirl qvageittgp rvsalsvlrd
      481 lgffglykga kacflrdipf saiyfpcyah lkasftnedg rvspgnllla gsiagmpaas
      541 lvtpadvikt rlqvaaragq ttysgvvdcf vkilreegpk alwkgagarv frsspqfgvt
      601 lvtyellqrw fyvdfggvkp agsetvpksr itlpapnpdh vggyklavat fagienkfgl
      661 ylprfkpspp tskaaaavgp
//
LOCUS       XP_041322634             675 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding mitochondrial carrier protein Aralar2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322634
VERSION     XP_041322634.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466700.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..675
                     /product="calcium-binding mitochondrial carrier protein
                     Aralar2 isoform X2"
                     /calculated_mol_wt=73903
     Region          12..117
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          91..>160
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cl28896"
                     /db_xref="CDD:333716"
     Region          91..116
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320075"
     Region          328..421
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          423..512
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          515..607
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..675
                     /gene="SLC25A13"
                     /coded_by="XM_041466700.1:68..2095"
                     /db_xref="GeneID:121353131"
ORIGIN      
        1 maakvaltkr adpaelkaif lkyasvekng efymspndfv trylkiigdg lpnastvqll
       61 agvvdqtkdg lisfqefvaf esvlcapdal fivafqlfdk tgkgevtfed akqvfgqtti
      121 hqhipfnwns efvqlhfgkd rkrhltyaef tqflleiqle hakqafvqrd naqsgrvtam
      181 dfrdimvtir phmltpfvee clvaaaggtt shqvsfsyfn gfnsllnnme lirkiystla
      241 gnrkdvevtk eefvlaaqkf gqvtpmevdi lfqladlyep rgrmtladie riapleegtl
      301 pynlaeaqrq kasgdvsrpv liqiaesayr falgsvagav gatavypidl vktrmqnqrs
      361 tgsfvgelmy knsfdcfkkv lryegffgly rgllpqllgv apekaikltv ndfvrdkfrt
      421 kdgsvplaae ilaggcaggs qviftnplei vkirlqvage ittgprvsal svlrdlgffg
      481 lykgakacfl rdipfsaiyf pcyahlkasf tnedgrvspg nlllagsiag mpaaslvtpa
      541 dviktrlqva aragqttysg vvdcfvkilr eegpkalwkg agarvfrssp qfgvtlvtye
      601 llqrwfyvdf ggvkpagset vpksritlpa pnpdhvggyk lavatfagie nkfglylprf
      661 kpspptskaa aavgp
//
LOCUS       XP_041322635             468 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-chimaerin [Pyrgilauda ruficollis].
ACCESSION   XP_041322635
VERSION     XP_041322635.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466701.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="beta-chimaerin"
                     /calculated_mol_wt=53662
     Region          52..138
                     /region_name="SH2_a2chimerin_b2chimerin"
                     /note="Src homology 2 (SH2) domain found in
                     alpha2-chimerin and beta2-chimerin proteins; cd10352"
                     /db_xref="CDD:198215"
     Site            order(66,83,104,106)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198215"
     Site            order(105,126)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198215"
     Region          210..270
                     /region_name="C1_betaCHN"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in beta-chimaerin and similar proteins; cd20857"
                     /db_xref="CDD:410407"
     Site            order(220..226,234..238,241)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410407"
     Region          275..468
                     /region_name="RhoGAP_chimaerin"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of chimaerins. Chimaerins are a
                     family of phorbolester- and diacylglycerol-responsive GAPs
                     specific for the Rho-like GTPase Rac. Chimaerins exist in
                     two alternative splice forms...; cd04372"
                     /db_xref="CDD:239837"
     Site            order(313,353,357,426,429..430,454)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239837"
     Site            313
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239837"
     CDS             1..468
                     /gene="CHN2"
                     /coded_by="XM_041466701.1:313..1719"
                     /db_xref="GeneID:121353132"
ORIGIN      
        1 maassnssls gssvssdaee yqppiwksyl yqlqqeaprp kriicpreve nrpkyygref
       61 hgiisreqad eilagvegay ilresqrqpg cytlalrfgn qtlnyrlfyd gkhfvgekrf
      121 esihdlvtdg litlyietka seyiskmttn piyehigyat llrekvsrrl srtknesrka
      181 svtseentpv ekitslvrra altqndnhfn yekahnfkvh tfrgphwcey canfmwglia
      241 qgvrcsdcgl nvhkqcskyv pndcqpdlkr ikrvyccdlt tlvkahntqr pmvvdscire
      301 iearglkseg lyrvsgfteh iedvkmafdr dgdkadisas iypdiniiag alklyfrdlp
      361 ipvitydtys kfieaakisn aderleaihe vlmllpaahy etlrylmihl kkvtlheken
      421 fmnaenlgiv fgptlmrppe dstlatlndm ryqklivqil ienedvlf
//
LOCUS       XP_041322637             165 aa            linear   VRT 06-MAY-2021
DEFINITION  anterior gradient protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322637
VERSION     XP_041322637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="anterior gradient protein 3"
                     /calculated_mol_wt=18985
     Region          36..165
                     /region_name="AGR"
                     /note="Anterior Gradient (AGR) family; members of this
                     family are similar to secreted proteins encoded by the
                     cement gland-specific genes XAG-1 and XAG-2, expressed in
                     the anterior region of dorsal ectoderm of Xenopus. They
                     are implicated in the formation of...; cd02960"
                     /db_xref="CDD:239258"
     Site            order(70,73)
                     /site_type="active"
                     /note="putative catalytic residues [active]"
                     /db_xref="CDD:239258"
     CDS             1..165
                     /gene="AGR3"
                     /coded_by="XM_041466703.1:1..498"
                     /db_xref="GeneID:121353133"
ORIGIN      
        1 mlhstlalsl lliavtsnla maikkekrap qtlsrgwgde itwvqtyeeg lyqakksnkp
       61 lmvihhledc qycqalkkaf aeneeiqema qnnfimlnlm hettdknlsp dgqyvprimf
      121 vdpsltvrad itgrysnrly tyepqdmmfl ienmkkalrl iqtel
//
LOCUS       XP_041322638             239 aa            linear   VRT 06-MAY-2021
DEFINITION  tissue factor pathway inhibitor 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322638
VERSION     XP_041322638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466704.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..239
                     /product="tissue factor pathway inhibitor 2 isoform X1"
                     /calculated_mol_wt=27019
     Region          29..84
                     /region_name="Kunitz_TFPI2_1-like"
                     /note="Kunitz domain 1 (KD1) of tissue factor pathway
                     inhibitor 2 (TFPI2) and similar proteins; cd22616"
                     /db_xref="CDD:438659"
     Site            order(40..47,62,64,66)
                     /site_type="other"
                     /note="serine protease binding site [polypeptide binding]"
                     /db_xref="CDD:438659"
     Region          90..143
                     /region_name="Kunitz_TFPI2_2-like"
                     /note="Kunitz domain 2 (KD2) of tissue factor pathway
                     inhibitor 2 (TFPI2) and similar proteins; cd22617"
                     /db_xref="CDD:438660"
     Region          150..203
                     /region_name="Kunitz_TFPI1_TFPI2_3-like"
                     /note="Kunitz protease inhibitor (KPI) domain 3 (KPI-3 or
                     K3) of tissue factor pathway inhibitor (TFPI) and TFPI2,
                     and similar proteins; cd22615"
                     /db_xref="CDD:438658"
     CDS             1..239
                     /gene="TFPI2"
                     /coded_by="XM_041466704.1:454..1173"
                     /db_xref="GeneID:121353134"
ORIGIN      
        1 masgrrlplp alllplacaa laqrpltekq racllapdeg pcralvprwy ydrhtqscqe
       61 ftyggcygna nnfltfddce kscwtikkvp klcrmeadgg pcrsylrrya fnlssmrcee
      121 fiyggcygng nnfrdlqscv dhclpektgp llcyspkdeg lcsssvpryy ydtktkscke
      181 frytgcggna nnfvtemdcy nvcrkagnqk psinkptnvs rrkivrklkk ksqmynlks
//
LOCUS       XP_041322639             238 aa            linear   VRT 06-MAY-2021
DEFINITION  tissue factor pathway inhibitor 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322639
VERSION     XP_041322639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="tissue factor pathway inhibitor 2 isoform X2"
                     /calculated_mol_wt=26948
     Region          29..84
                     /region_name="Kunitz_TFPI2_1-like"
                     /note="Kunitz domain 1 (KD1) of tissue factor pathway
                     inhibitor 2 (TFPI2) and similar proteins; cd22616"
                     /db_xref="CDD:438659"
     Site            order(40..47,62,64,66)
                     /site_type="other"
                     /note="serine protease binding site [polypeptide binding]"
                     /db_xref="CDD:438659"
     Region          90..143
                     /region_name="Kunitz_TFPI2_2-like"
                     /note="Kunitz domain 2 (KD2) of tissue factor pathway
                     inhibitor 2 (TFPI2) and similar proteins; cd22617"
                     /db_xref="CDD:438660"
     Region          150..203
                     /region_name="Kunitz_TFPI1_TFPI2_3-like"
                     /note="Kunitz protease inhibitor (KPI) domain 3 (KPI-3 or
                     K3) of tissue factor pathway inhibitor (TFPI) and TFPI2,
                     and similar proteins; cd22615"
                     /db_xref="CDD:438658"
     CDS             1..238
                     /gene="TFPI2"
                     /coded_by="XM_041466705.1:460..1176"
                     /db_xref="GeneID:121353134"
ORIGIN      
        1 masgrrlplp alllplacaa laqrpltekq racllapdeg pcralvprwy ydrhtqscqe
       61 ftyggcygna nnfltfddce kscwtikkvp klcrmeadgg pcrsylrrya fnlssmrcee
      121 fiyggcygng nnfrdlqscv dhclpektgp llcyspkdeg lcsssvpryy ydtktkscke
      181 frytgcggna nnfvtemdcy nvcrkgnqkp sinkptnvsr rkivrklkkk sqmynlks
//
LOCUS       XP_041322640             477 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS translocation variant 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322640
VERSION     XP_041322640.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466706.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="ETS translocation variant 1 isoform X1"
                     /calculated_mol_wt=55068
     Region          1..333
                     /region_name="ETS_PEA3_N"
                     /note="PEA3 subfamily ETS-domain transcription factor N
                     terminal domain; pfam04621"
                     /db_xref="CDD:461371"
     Region          334..418
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..477
                     /gene="ETV1"
                     /coded_by="XM_041466706.1:221..1654"
                     /db_xref="GeneID:121353135"
ORIGIN      
        1 mdgfydqqvp ymvtnnprgr ncnerptnvr krkfinrdla hdseelfqdl sqlqetwlae
       61 aqvpdndeqf vpdyqaesla fhglpvkikk ephspcselg sacsqeqpfk fsygekclyn
      121 vsaydqkpqv gmrpsnpptp sstpvsplhh aspnsaqtpk pdrvfpthlp psqsiqdnsf
      181 pmdhrfrrql sepcnsfppl pampregrpi yqrqmsepni pfppqgfkqe yhdpvyehna
      241 mvgsaasqnf ppplmikqep rdfaydsevp schsiymrqe gflahpnrte gcmyekgprq
      301 fyddtcvvpe kfdgdvkqep gmyregptyq rrgslqlwqf lvallddpsn shfiawtgrg
      361 mefkliepee varrwgiqkn rpamnydkls rslryyyekg imqkvagery vykfvcdpea
      421 lfsmafpdnq rpllktdmer hineedtvpl shfdesmvym qdggccnthp ynegyvy
//
LOCUS       XP_041322641             454 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS translocation variant 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322641
VERSION     XP_041322641.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466707.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="ETS translocation variant 1 isoform X2"
                     /calculated_mol_wt=52384
     Region          1..310
                     /region_name="ETS_PEA3_N"
                     /note="PEA3 subfamily ETS-domain transcription factor N
                     terminal domain; pfam04621"
                     /db_xref="CDD:461371"
     Region          311..395
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..454
                     /gene="ETV1"
                     /coded_by="XM_041466707.1:221..1585"
                     /db_xref="GeneID:121353135"
ORIGIN      
        1 mdgfydqqvp ymvtnnprgr ncnerptnvr krkfinrdla hdseelfqdl sqlqetwlae
       61 aqvpdndeqf vpdyqaesla fhglpvkikk ephspcselg sacsqeqpfk fsygekclyn
      121 vsaydqkpqv gmrpsnpptp sstpvsplhh aspnsaqtpk pdrvfpthlp psqsiqdnsf
      181 pmdhrfrrql sepcnsfppl pampregrpi yqrqmsepni pfppqgfkqe yhdpvyehna
      241 mvgsaasqnf ppplmikqep rdfaydsgcm yekgprqfyd dtcvvpekfd gdvkqepgmy
      301 regptyqrrg slqlwqflva llddpsnshf iawtgrgmef kliepeevar rwgiqknrpa
      361 mnydklsrsl ryyyekgimq kvageryvyk fvcdpealfs mafpdnqrpl lktdmerhin
      421 eedtvplshf desmvymqdg gccnthpyne gyvy
//
LOCUS       XP_041322642            2047 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TOPAZ1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322642
VERSION     XP_041322642.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466708.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2047
                     /product="protein TOPAZ1"
                     /calculated_mol_wt=228448
     Region          1645..1820
                     /region_name="Asp_Glu_race_2"
                     /note="Putative aspartate racemase; pfam14669"
                     /db_xref="CDD:464250"
     CDS             1..2047
                     /gene="TOPAZ1"
                     /coded_by="XM_041466708.1:1..6144"
                     /db_xref="GeneID:121353136"
ORIGIN      
        1 mpqlrsgkvv rtsevklvdp evsspasppa gcepegklvv qrsrrlapkr kpeqplpsfp
       61 qparlsrtsf kcfalpvpmq keqgenrqkf ppkktkriqq rksprrskgv aslvsnaaec
      121 edwqaaatga amcweetlrg tgqsqqllfs gttlqkkfsa gidrnehcse dlnffpfhkg
      181 sgssgtegkh scveiklqvp nlkrevestk rrgiscfpep evlqpkkvtw stevkcagst
      241 mmqnmqipdf rknlgaqevv pepkpqeevd ileklngcll vrsrtlgtqe kegrclgekg
      301 rsvgkpkvhg pkerdssall kqhtqcpesr kgalsmrnrn allsqqlqdl sgqeqpttrr
      361 ktqkrcikee qqssspqkrp dspgesveeq lraieqdsgt sqavkvktkq nrvedskeke
      421 shysisstvs tsgdtesksf lchavteepg vqcrkrqhrs glikhlqsls vtaaekvmnp
      481 sakcgaergs nvlnhcsgll caaeknpfvv ledcsyintl vkpsasgttn syklngffhv
      541 thgtgdlndr icstsrmqke rslikgglsp nkeknvnekg cvshclness kclrgkkwni
      601 grkprkkmki tekssdmask ckkcelqtea avamsssfsg sglnhtfsas cdhtshfdte
      661 kntqevqtvs awrknstkll afetgfnkts elsavvkgen sssmahyaaa sdslralaqi
      721 hdvcdrqksk tggnlnkvtk klqqftcqrt ipmtgkkvwp vescartsew flknhrfise
      781 gkrllkaafe dssdksavka vecsavtgnv rqldlhtssa eiakeithkk idpnidcqas
      841 letmesssvd iyqtltmnne ngespvntdk savafdhddv qevkadlnft akqkdeaegd
      901 vtekntsvtv qngtikqedk degvvtnrdr svtvqndttk qkdknegkvt krnlsvtvqn
      961 gttkrkekne gdvtnrnlpa tvqnsitkqk denegdvtnr nlsvtiqsgt sasntnsinf
     1021 spkvsvvnqi fsdlslikpl tsgnltkfki plcrnkpksk kqesvrsfqs ktcsplelle
     1081 stspgrqktg eetflvkseq rplsvmsdat spasiqkkad eidskdfqhn gsvnlsdems
     1141 vlpesfsayp halldgqpep svpdfcgtec vlkssfpdhs wnavnhlvgl einegdrksr
     1201 gnfsqckrqn lpdvleaynq dvlvidviqd dpdlfgtsne eesaparcen cpvkassanc
     1261 ikdtkvyikp espvtsekty svessfrcvq esgkssdten scnlvlkaed vkthnssrgs
     1321 spsgdvsedf lkdrqqskld dlltsldmde kfkvadgvpd veeenkseag ksdckykvng
     1381 ellsgvplnd rkvnlfsgtt emkswthgck ssgrstslpl kncgdfepwk meknasasps
     1441 vqqildalnl prkycryyfm tsrgcertkc wfchvpgqgd ekicmailrt yisikesgll
     1501 kravqifvqy ykevtpgvdf asevlnnllv sllnncllqe vfqilnvivq iktlpaidvl
     1561 lkvfdhvasl nirnavptli stfcklidag mflelehfdy iikvlrqlqv sswemstvik
     1621 mksrikeryf ektwifdfnl avaeiqhcke krdwtklgal ylnartgceh fedlqklfls
     1681 iaeiltkdse adrpgvpfcd fadivmknsq hnkadrlfig rtgisvmysy hkllqwikgr
     1741 kvldklhelq idftllkglv gtgrsasrcq ivnkateifl ysgnldaatr vlrdsewitn
     1801 aplwpcdkmd ilnrhnllca iahkylrksl yrqafevlqn lpglqkhsdt idasqysclf
     1861 nklinacfen knlavsssav dfmlskkiai dfvllrglit algrsslwsn artyyknals
     1921 lgcypelqgn lyhklvkips ylsevemlla ieiflvsnas diqssrtttq tlqiilkrse
     1981 dtvqnnnayh eaverliqaa hlsdpklflk hltmnvnmee vyrvehssal kwlqenmkwa
     2041 ekvwlfq
//
LOCUS       XP_041322643             892 aa            linear   VRT 06-MAY-2021
DEFINITION  protein PTHB1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322643
VERSION     XP_041322643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..892
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..892
                     /product="protein PTHB1"
                     /calculated_mol_wt=99337
     Region          1..418
                     /region_name="PHTB1_N"
                     /note="PTHB1 N-terminus; pfam14727"
                     /db_xref="CDD:464284"
     Region          441..819
                     /region_name="PHTB1_C"
                     /note="PTHB1 C-terminus; pfam14728"
                     /db_xref="CDD:464285"
     CDS             1..892
                     /gene="BBS9"
                     /coded_by="XM_041466709.1:373..3051"
                     /db_xref="GeneID:121353137"
ORIGIN      
        1 mslfkardww stilgekeef dqgclcvadv dnsgsgqdki ivgsyngylr ifnphpvkpg
       61 devqpedlll evqlrepilq vevgkfvsgt eglhlavlhc rklcvyavsg tqgnvehgnq
      121 yqiklmyehn lqrtacnmty gpfggvkgrd liciqsmdgm lmlfeqesya fgrflpgfll
      181 pgplayssrt dsfitvsscq qvesykyqvl afatdaderh dteqrklssg krlvvdwvln
      241 igeqaldici vsfnqgvssv fvlgernffc lkdngqirfm kkldyspscf ipycsvregt
      301 intlianhnk mlnvyqdvtl kwatqlpcip vsvkvanfqd lkgvivtlsd dgrlqcsylg
      361 tdpslfqapk vdsremnyee mnaemkelqk iikeasktqd ilpesekqrd vtvtaevspd
      421 ldeesqaids evkagavpsv tvkitiqsrv taqkpslavc vqaplavtcd qfvfndlepd
      481 ssetvvlsvf lkencsppel egtcmfsyni stelnpegip rvsqcnfslp lklvcfpaqp
      541 skaanhklti dtnkppisfv tifpdfldps egdqanalgf qfltgskttl lasktsqryr
      601 iqsdqledlw lvtkelihrl eehfkkqnck dfacsfsgsi plqeyfelid rhfelrlnae
      661 kyqellsera vqfraierrl ltrfkdktpa plqhldtlle gtfreviala daaeenqanm
      721 fqafaklksa thlvimlisl wqklstdqia ileatflpla edtqelgwee tvdaavsyll
      781 rtclsksske qaltlssqls mpkdtsrlkk nitlfcdrla kggrlslstd satqqaavmp
      841 ggcatipesd leertvipgs tavfsgqgqs tkqkskpglc edaaeetksh el
//
LOCUS       XP_041322644             584 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP9 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322644
VERSION     XP_041322644.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466710.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..584
                     /product="peptidyl-prolyl cis-trans isomerase FKBP9
                     isoform X1"
                     /calculated_mol_wt=64265
     Region          59..151
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          171..263
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          283..374
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          394..486
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          492..>571
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..584
                     /gene="FKBP9"
                     /coded_by="XM_041466710.1:256..2010"
                     /db_xref="GeneID:121353138"
ORIGIN      
        1 magpaavrrr gpgcgsllll lpalleswaa cqappvpaae ippdgtelgv errfvpescp
       61 ravrpgdfvr yhylgafpdg trfdssydrg stfnvfvgkg qliagmdqal vgmcvnerrf
      121 vkippklayg segvpgvipp navlhfdvll idlwnsedev qvqtyfkpek cprtvqvsdf
      181 vryhyngtfl dgtlfdsshn rmrtydtyvg igwlipgmdq gllgmcvgek riitippfla
      241 ygedgdgkei pgqaslvfdv vlldlhnpkd giaienqlvp escerrsqtg dflryhyngt
      301 lldgtlfdss ysrnrtydty vgkgyviagm degllgvctg ekrriiipph lgygeegrgk
      361 ipgsavlvfd ihvvdfhnps dsvsitvhyk psnctvlsrk gdylkyhyna slldgtllds
      421 thslgktyni vlgsgqvvlg mdmglqdmcv gerrtvvipp hlgygedgve gevpgsavlv
      481 fdiellelvs glpegymfvw ngevspnlfe eidqnhdgev lleefseyiq tqvdtgkgkl
      541 apgfdfdkiv knmftnqdrd gngkvtaeef klkdqeakee hdel
//
LOCUS       XP_041322646             548 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP9 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322646
VERSION     XP_041322646.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466712.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..548
                     /product="peptidyl-prolyl cis-trans isomerase FKBP9
                     isoform X2"
                     /calculated_mol_wt=59947
     Region          59..151
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          171..263
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          283..374
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          394..486
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..548
                     /gene="FKBP9"
                     /coded_by="XM_041466712.1:259..1905"
                     /db_xref="GeneID:121353138"
ORIGIN      
        1 magpaavrrr gpgcgsllll lpalleswaa cqappvpaae ippdgtelgv errfvpescp
       61 ravrpgdfvr yhylgafpdg trfdssydrg stfnvfvgkg qliagmdqal vgmcvnerrf
      121 vkippklayg segvpgvipp navlhfdvll idlwnsedev qvqtyfkpek cprtvqvsdf
      181 vryhyngtfl dgtlfdsshn rmrtydtyvg igwlipgmdq gllgmcvgek riitippfla
      241 ygedgdgkei pgqaslvfdv vlldlhnpkd giaienqlvp escerrsqtg dflryhyngt
      301 lldgtlfdss ysrnrtydty vgkgyviagm degllgvctg ekrriiipph lgygeegrgk
      361 ipgsavlvfd ihvvdfhnps dsvsitvhyk psnctvlsrk gdylkyhyna slldgtllds
      421 thslgktyni vlgsgqvvlg mdmglqdmcv gerrtvvipp hlgygedgve gevpgsavlv
      481 fdiellelvs glpegymfvw ngevspnlfe eidqnhdgev lleesdvacs ahragcgpve
      541 qhemplri
//
LOCUS       XP_041322647             530 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP9 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322647
VERSION     XP_041322647.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466713.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..530
                     /product="peptidyl-prolyl cis-trans isomerase FKBP9
                     isoform X3"
                     /calculated_mol_wt=58013
     Region          59..151
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          171..263
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          283..374
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          394..486
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..530
                     /gene="FKBP9"
                     /coded_by="XM_041466713.1:258..1850"
                     /db_xref="GeneID:121353138"
ORIGIN      
        1 magpaavrrr gpgcgsllll lpalleswaa cqappvpaae ippdgtelgv errfvpescp
       61 ravrpgdfvr yhylgafpdg trfdssydrg stfnvfvgkg qliagmdqal vgmcvnerrf
      121 vkippklayg segvpgvipp navlhfdvll idlwnsedev qvqtyfkpek cprtvqvsdf
      181 vryhyngtfl dgtlfdsshn rmrtydtyvg igwlipgmdq gllgmcvgek riitippfla
      241 ygedgdgkei pgqaslvfdv vlldlhnpkd giaienqlvp escerrsqtg dflryhyngt
      301 lldgtlfdss ysrnrtydty vgkgyviagm degllgvctg ekrriiipph lgygeegrgk
      361 ipgsavlvfd ihvvdfhnps dsvsitvhyk psnctvlsrk gdylkyhyna slldgtllds
      421 thslgktyni vlgsgqvvlg mdmglqdmcv gerrtvvipp hlgygedgve gevpgsavlv
      481 fdiellelvs glpegymfvw ngevspnlfe eidqnhdgev lleeqltpgd
//
LOCUS       XP_041322648             474 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase FKBP9 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322648
VERSION     XP_041322648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="peptidyl-prolyl cis-trans isomerase FKBP9
                     isoform X4"
                     /calculated_mol_wt=51855
     Region          59..151
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          171..263
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          283..374
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     Region          394..470
                     /region_name="FKBP_C"
                     /note="FKBP-type peptidyl-prolyl cis-trans isomerase;
                     pfam00254"
                     /db_xref="CDD:459735"
     CDS             1..474
                     /gene="FKBP9"
                     /coded_by="XM_041466714.1:260..1684"
                     /db_xref="GeneID:121353138"
ORIGIN      
        1 magpaavrrr gpgcgsllll lpalleswaa cqappvpaae ippdgtelgv errfvpescp
       61 ravrpgdfvr yhylgafpdg trfdssydrg stfnvfvgkg qliagmdqal vgmcvnerrf
      121 vkippklayg segvpgvipp navlhfdvll idlwnsedev qvqtyfkpek cprtvqvsdf
      181 vryhyngtfl dgtlfdsshn rmrtydtyvg igwlipgmdq gllgmcvgek riitippfla
      241 ygedgdgkei pgqaslvfdv vlldlhnpkd giaienqlvp escerrsqtg dflryhyngt
      301 lldgtlfdss ysrnrtydty vgkgyviagm degllgvctg ekrriiipph lgygeegrgk
      361 ipgsavlvfd ihvvdfhnps dsvsitvhyk psnctvlsrk gdylkyhyna slldgtllds
      421 thslgktyni vlgsgqvvlg mdmglqdmcv gerrtvvipp hlgygedgva adpw
//
LOCUS       XP_041322649             371 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322649
VERSION     XP_041322649.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466715.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="cytosolic 5'-nucleotidase 3A isoform X1"
                     /calculated_mol_wt=41686
     Region          86..325
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(110..114,129,150,154,157,174..175,178,225..227,271,
                     274,298..299,302..303)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..371
                     /gene="NT5C3A"
                     /coded_by="XM_041466715.1:147..1262"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mdrtavakmg avasasvcal vggvvlaqyi ftmkkktacm qalhlwtlla tyavavgqnq
       61 gqknqecpkl naqmpefqkk tvhikdparv eeiicglikg gaaklqiitd fdmtlsrfsy
      121 ngkrcptchn iidnskiitd ecrkkllqlk etyyaieidp altieekypy mvewyhksha
      181 llieqglqkd kfaeivresd vmlkegyenf fdklsehnip vfifsagigd ileevihqag
      241 vyhsnvkvvs nfmdfdengi lkgfkgelih vynkhdgalk nteyfkqlkd nsniillgds
      301 qgdlsmadgv anvehilkig ylndkssnca tfrslrncne nvgefrsafs strikthlkk
      361 wplslqplic y
//
LOCUS       XP_041322650             358 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322650
VERSION     XP_041322650.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466716.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="cytosolic 5'-nucleotidase 3A isoform X2"
                     /calculated_mol_wt=40208
     Region          86..358
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(110..114,129,150,154,157,174..175,178,225..227,271,
                     274,298..299,302..303)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..358
                     /gene="NT5C3A"
                     /coded_by="XM_041466716.1:142..1218"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mdrtavakmg avasasvcal vggvvlaqyi ftmkkktacm qalhlwtlla tyavavgqnq
       61 gqknqecpkl naqmpefqkk tvhikdparv eeiicglikg gaaklqiitd fdmtlsrfsy
      121 ngkrcptchn iidnskiitd ecrkkllqlk etyyaieidp altieekypy mvewyhksha
      181 llieqglqkd kfaeivresd vmlkegyenf fdklsehnip vfifsagigd ileevihqag
      241 vyhsnvkvvs nfmdfdengi lkgfkgelih vynkhdgalk nteyfkqlkd nsniillgds
      301 qgdlsmadgv anvehilkig ylndkvdell ekymdsydiv lvkdesleva nsilqkil
//
LOCUS       XP_041322651             344 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322651
VERSION     XP_041322651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466717.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="cytosolic 5'-nucleotidase 3A isoform X3"
                     /calculated_mol_wt=38791
     Region          59..298
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(83..87,102,123,127,130,147..148,151,198..200,244,
                     247,271..272,275..276)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..344
                     /gene="NT5C3A"
                     /coded_by="XM_041466717.1:144..1178"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mdrtavakmg avasasvcal vggvvlaqyi ftmkkktgkk tkiiemmpef qkktvhikdp
       61 arveeiicgl ikggaaklqi itdfdmtlsr fsyngkrcpt chniidnski itdecrkkll
      121 qlketyyaie idpaltieek ypymvewyhk shallieqgl qkdkfaeivr esdvmlkegy
      181 enffdklseh nipvfifsag igdileevih qagvyhsnvk vvsnfmdfde ngilkgfkge
      241 lihvynkhdg alknteyfkq lkdnsniill gdsqgdlsma dgvanvehil kigylndkss
      301 ncatfrslrn cnenvgefrs afsstrikth lkkwplslqp licy
//
LOCUS       XP_041322652             331 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322652
VERSION     XP_041322652.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466718.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="cytosolic 5'-nucleotidase 3A isoform X4"
                     /calculated_mol_wt=37312
     Region          59..331
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(83..87,102,123,127,130,147..148,151,198..200,244,
                     247,271..272,275..276)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..331
                     /gene="NT5C3A"
                     /coded_by="XM_041466718.1:141..1136"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mdrtavakmg avasasvcal vggvvlaqyi ftmkkktgkk tkiiemmpef qkktvhikdp
       61 arveeiicgl ikggaaklqi itdfdmtlsr fsyngkrcpt chniidnski itdecrkkll
      121 qlketyyaie idpaltieek ypymvewyhk shallieqgl qkdkfaeivr esdvmlkegy
      181 enffdklseh nipvfifsag igdileevih qagvyhsnvk vvsnfmdfde ngilkgfkge
      241 lihvynkhdg alknteyfkq lkdnsniill gdsqgdlsma dgvanvehil kigylndkvd
      301 ellekymdsy divlvkdesl evansilqki l
//
LOCUS       XP_041322653             332 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322653
VERSION     XP_041322653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..332
                     /product="cytosolic 5'-nucleotidase 3A isoform X5"
                     /calculated_mol_wt=37712
     Region          47..286
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(71..75,90,111,115,118,135..136,139,186..188,232,235,
                     259..260,263..264)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..332
                     /gene="NT5C3A"
                     /coded_by="XM_041466719.1:132..1130"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mqalhlwtll atyavavgqn qgqknqecpk lnaqmpefqk ktvhikdpar veeiicglik
       61 ggaaklqiit dfdmtlsrfs yngkrcptch niidnskiit decrkkllql ketyyaieid
      121 paltieekyp ymvewyhksh allieqglqk dkfaeivres dvmlkegyen ffdklsehni
      181 pvfifsagig dileevihqa gvyhsnvkvv snfmdfdeng ilkgfkgeli hvynkhdgal
      241 knteyfkqlk dnsniillgd sqgdlsmadg vanvehilki gylndkssnc atfrslrncn
      301 envgefrsaf sstrikthlk kwplslqpli cy
//
LOCUS       XP_041322654             332 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322654
VERSION     XP_041322654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..332
                     /product="cytosolic 5'-nucleotidase 3A isoform X5"
                     /calculated_mol_wt=37712
     Region          47..286
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(71..75,90,111,115,118,135..136,139,186..188,232,235,
                     259..260,263..264)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..332
                     /gene="NT5C3A"
                     /coded_by="XM_041466720.1:287..1285"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mqalhlwtll atyavavgqn qgqknqecpk lnaqmpefqk ktvhikdpar veeiicglik
       61 ggaaklqiit dfdmtlsrfs yngkrcptch niidnskiit decrkkllql ketyyaieid
      121 paltieekyp ymvewyhksh allieqglqk dkfaeivres dvmlkegyen ffdklsehni
      181 pvfifsagig dileevihqa gvyhsnvkvv snfmdfdeng ilkgfkgeli hvynkhdgal
      241 knteyfkqlk dnsniillgd sqgdlsmadg vanvehilki gylndkssnc atfrslrncn
      301 envgefrsaf sstrikthlk kwplslqpli cy
//
LOCUS       XP_041322656             298 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322656
VERSION     XP_041322656.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466722.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="cytosolic 5'-nucleotidase 3A isoform X6"
                     /calculated_mol_wt=33962
     Region          13..252
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(37..41,56,77,81,84,101..102,105,152..154,198,201,
                     225..226,229..230)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..298
                     /gene="NT5C3A"
                     /coded_by="XM_041466722.1:191..1087"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mpefqkktvh ikdparveei icglikggaa klqiitdfdm tlsrfsyngk rcptchniid
       61 nskiitdecr kkllqlkety yaieidpalt ieekypymve wyhkshalli eqglqkdkfa
      121 eivresdvml kegyenffdk lsehnipvfi fsagigdile evihqagvyh snvkvvsnfm
      181 dfdengilkg fkgelihvyn khdgalknte yfkqlkdnsn iillgdsqgd lsmadgvanv
      241 ehilkigyln dkssncatfr slrncnenvg efrsafsstr ikthlkkwpl slqplicy
//
LOCUS       XP_041322657             298 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322657
VERSION     XP_041322657.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466723.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="cytosolic 5'-nucleotidase 3A isoform X6"
                     /calculated_mol_wt=33962
     Region          13..252
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(37..41,56,77,81,84,101..102,105,152..154,198,201,
                     225..226,229..230)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..298
                     /gene="NT5C3A"
                     /coded_by="XM_041466723.1:92..988"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mpefqkktvh ikdparveei icglikggaa klqiitdfdm tlsrfsyngk rcptchniid
       61 nskiitdecr kkllqlkety yaieidpalt ieekypymve wyhkshalli eqglqkdkfa
      121 eivresdvml kegyenffdk lsehnipvfi fsagigdile evihqagvyh snvkvvsnfm
      181 dfdengilkg fkgelihvyn khdgalknte yfkqlkdnsn iillgdsqgd lsmadgvanv
      241 ehilkigyln dkssncatfr slrncnenvg efrsafsstr ikthlkkwpl slqplicy
//
LOCUS       XP_041322658             298 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic 5'-nucleotidase 3A isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322658
VERSION     XP_041322658.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466724.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="cytosolic 5'-nucleotidase 3A isoform X6"
                     /calculated_mol_wt=33962
     Region          13..252
                     /region_name="HAD_5NT"
                     /note="haloacid dehalogenase (HAD)-like 5'-nucleotidases
                     similar to human cytosolic IIIA and IIIB; cd07504"
                     /db_xref="CDD:319807"
     Site            order(37..41,56,77,81,84,101..102,105,152..154,198,201,
                     225..226,229..230)
                     /site_type="active"
                     /db_xref="CDD:319807"
     CDS             1..298
                     /gene="NT5C3A"
                     /coded_by="XM_041466724.1:256..1152"
                     /db_xref="GeneID:121353139"
ORIGIN      
        1 mpefqkktvh ikdparveei icglikggaa klqiitdfdm tlsrfsyngk rcptchniid
       61 nskiitdecr kkllqlkety yaieidpalt ieekypymve wyhkshalli eqglqkdkfa
      121 eivresdvml kegyenffdk lsehnipvfi fsagigdile evihqagvyh snvkvvsnfm
      181 dfdengilkg fkgelihvyn khdgalknte yfkqlkdnsn iillgdsqgd lsmadgvanv
      241 ehilkigyln dkssncatfr slrncnenvg efrsafsstr ikthlkkwpl slqplicy
//
LOCUS       XP_041322659            1643 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 7A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322659
VERSION     XP_041322659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1643
                     /product="thrombospondin type-1 domain-containing protein
                     7A"
                     /calculated_mol_wt=183744
     Region          52..104
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          186..237
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     Region          352..406
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     Region          504..561
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; cl46269"
                     /db_xref="CDD:480609"
     Region          623..681
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     Region          686..754
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          759..815
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     Region          1023..>1063
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     Region          1086..1148
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1153..1203
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; cl46269"
                     /db_xref="CDD:480609"
     Region          1273..1326
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     Region          1401..1460
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     CDS             1..1643
                     /gene="THSD7A"
                     /coded_by="XM_041466725.1:465..5396"
                     /db_xref="GeneID:121353140"
ORIGIN      
        1 mglsegsasl crgpgvcavp arcvgvlvll lllairdara qsefqtssvy lwktgpwgrc
       61 mgdecgpggi qtravwcahv egwttlptnc kqperpdnqq scfrvcdwhk elydwqigsw
      121 nqcrpvlsrs hekpleclrg eegiqtrdit ciqksngvpa edviceyfep kprqeqacli
      181 pcrqdcivae fspwsecskt cgnglqhrtr hvvappqfgg sacpnltefq mcqsspctve
      241 eslyslnvgp wsacsvphsr qirqvrkrgk nkdkekerek avrdpearel ikkkrnrnrq
      301 nrqenkywdi qigyqtrqvt cthrngktaa lsfcnqeklp itfqscvitk ecqvsewsew
      361 tpcsktcfdm ttpkgnrtrs rtikqlpvgs esecpqleea eqcvsqgdgv apcitygwrt
      421 tewtecrvdp llsqqdkrrg nqtalcgggi qtrevycvqa nenllsylnt lkdkeasrpv
      481 drklctgplp stsqlchvpc ptecetsaws awgpctyesc ddpqakkgfk lrkrritnep
      541 tggtgncphl leaipceeps cydwritgle ecipdnekpc gpgtqvpavv cvnsdgeevd
      601 rqlcrdaiyp ipvvceapcp kdcvlsvwsa wsscshtcsg kttegkqmrs rsilayageg
      661 gtqcpnssal qetrscnehs ctvyhwqtgp wgqciedtsv safnssaswn geatcsvgmq
      721 trkvicvrvn vgqvgpkkcp eslrpetvrp cllpcrkdci vtpfsdwtpc psscqeggvt
      781 vrkqsrhrvi iqlpanggre cpdslleere ceaspvchny rwkthkwrrc qlvpwyvrqd
      841 spgaqetcgp glqaraitcr rqdggqadis eclkysgplp pltqmcqipc qddcqftnws
      901 kfspcngdcg gvrtrkrtlv gkskkkdkcr nsqlyplien qfcpcdkysa qpvgnwsdci
      961 lpegkmevll gmkvqgdvke cgqgyryqam acydqnnrlv etsrcnshgy ieeaciipcp
     1021 sdcklsewsn wsrcskscgs gvkvrskwlr ekpynggrpc pkldhinqaq vyevvpchsd
     1081 csqyiwvtep wsvckvtnvd lkencgegvq trkvrcmlnt vdgpsdtved ylcdpedmpl
     1141 garkctlpcp edcvmsewgs wsqcslpcng ssvrersaec lrqpddgkpc paateaeact
     1201 lnkncyhydy nvtdwstcql sekavcgsgi ktrmldcvrs dgksvdlkyc eelglektwq
     1261 mniscvvecp vncqlsdwst wsecsqtcgl tgkmirrrti nqpfqgdgrp cpsqmeqfkp
     1321 cpvkpcyrwq ygqwstckve daqcgegtrv rniscvvydg siedvgkvvd eefcgdiepv
     1381 idgdkkiile etctfpcpgd cylrewsews lcqltcfnge dlgfggvqvr sraviiqdle
     1441 nqhlcpeqal etrpcndgqc yeykwmaspw kgssrtvwcq rsdglnvtgg clvmrqpdad
     1501 rscnppcsqp haycsetktc scedgytevm ssdgtleqct lipvvviptm edkkgdvkts
     1561 ravnptqpss nqtgrgrtwf lqpfgpdgrl ktwvygvaag afvllifivs miylackkpk
     1621 kpqrrqnnrl kpltlaydgd adm
//
LOCUS       XP_041322660             168 aa            linear   VRT 06-MAY-2021
DEFINITION  vesicular, overexpressed in cancer, prosurvival protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322660
VERSION     XP_041322660.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466726.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="vesicular, overexpressed in cancer, prosurvival
                     protein 1"
                     /calculated_mol_wt=19052
     CDS             1..168
                     /gene="VOPP1"
                     /coded_by="XM_041466726.1:404..910"
                     /db_xref="GeneID:121353142"
ORIGIN      
        1 mkrfqpgval llsllwectd akkhcwyfeg lyptyyicrs yedccgsrcc vralsiqrlw
       61 yfwfllmmgv lfccgagffi rrrmyppplv eeptfnvsyt rqpvntasgs qqpgvpyytd
      121 pggsvmnpma mafhvqpnsp qgnpvypppp sycntppppy eqvvksst
//
LOCUS       XP_041322661             906 aa            linear   VRT 06-MAY-2021
DEFINITION  rab effector MyRIP isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322661
VERSION     XP_041322661.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466727.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..906
                     /product="rab effector MyRIP isoform X1"
                     /calculated_mol_wt=101706
     Region          8..125
                     /region_name="FYVE_2"
                     /note="FYVE-type zinc finger; pfam02318"
                     /db_xref="CDD:426716"
     Region          152..906
                     /region_name="Rab_eff_C"
                     /note="Rab effector MyRIP/melanophilin C-terminus;
                     pfam04698"
                     /db_xref="CDD:461398"
     CDS             1..906
                     /gene="LOC121353143"
                     /coded_by="XM_041466727.1:172..2892"
                     /db_xref="GeneID:121353143"
ORIGIN      
        1 mgrkldlsgl tdeeaehvlq vvqrdfslrk keeerlsemk qkldeegnkc silskqqkfn
       61 ehccirccsp ftflinskrq cqdckynick scstyqkkek awicsvcqqa rllrtqsldw
      121 yynnvksrfk cfgsakvlkn lykkhrlesg lcpdaiaegs lcegsfeneg sicgsdstfy
      181 qqteghsmmd tlavalrvae eaveeaiska etysdsldkq neacylqehk edlieelatt
      241 ivqkiikkqk skpeqaeadv ewppsrssgl asgavsdqsm ltfpgsrrgs ytlwrsqsaf
      301 slasedmask gqdpassvae algrqqkgqs rkqkehkhsa lpswksvdrl netsdqaleq
      361 vaqrccgvpf tediqesgcn pvpcagppsv fqstdgnwva lqnvtlprpr mlakpksqvf
      421 kalesessiv saydemgsds eddydwnval nklrrrprql pddfyysnsq ygtewvygnd
      481 qyqavtspss glytntetlf sdsetssvns sqeakgpskl lwlqsrtqsd mprmekkhfh
      541 geldvnfnpq atsleysdss etegvhydle krsrrwkknk atsedlceek nqakankmnl
      601 sqdfddlset disnedqhhd vkpelmedel ksrlfqlaak msdketssge eqesepgidl
      661 enqkeslsse engrsiqeel kkkysavslc nistevlkvi nateeliaes tdpcdfpddi
      721 qdrgrgtlpl gtdpvrldeq lttleenvyl tastvygleg qltnledaar kinsvteese
      781 ladledqvat aaaqvhhael qisdiesris altvaglnva pcvrltrkrd qkqtnqmhti
      841 dtsrqqrrkl pappikgeki dgspvttvrt fnrnfmlqgs ltqrtkerks takdlmepai
      901 gsavmy
//
LOCUS       XP_041322662             874 aa            linear   VRT 06-MAY-2021
DEFINITION  rab effector MyRIP isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322662
VERSION     XP_041322662.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466728.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..874
                     /product="rab effector MyRIP isoform X2"
                     /calculated_mol_wt=98358
     Region          8..125
                     /region_name="FYVE_2"
                     /note="FYVE-type zinc finger; pfam02318"
                     /db_xref="CDD:426716"
     Region          152..874
                     /region_name="Rab_eff_C"
                     /note="Rab effector MyRIP/melanophilin C-terminus;
                     pfam04698"
                     /db_xref="CDD:461398"
     CDS             1..874
                     /gene="LOC121353143"
                     /coded_by="XM_041466728.1:172..2796"
                     /db_xref="GeneID:121353143"
ORIGIN      
        1 mgrkldlsgl tdeeaehvlq vvqrdfslrk keeerlsemk qkldeegnkc silskqqkfn
       61 ehccirccsp ftflinskrq cqdckynick scstyqkkek awicsvcqqa rllrtqsldw
      121 yynnvksrfk cfgsakvlkn lykkhrlesg lcpdaiaegs lcegsfeneg sicgsdstfy
      181 qqteghsmmd tlavalrvae eaveeaiska etysdsldkq neacylqehk edlieelatt
      241 ivqkiikkqk skpeqaeadv ewppsrssgl asgavsdqsm ltfpgsrrgs ytlwrsqsaf
      301 slasedmask gqdpassvae algrqqkgqs rkqkehkhsa lpswksvdrl netsppsvfq
      361 stdgnwvalq nvtlprprml akpksqvfka lesessivsa ydemgsdsed dydwnvalnk
      421 lrrrprqlpd dfyysnsqyg tewvygndqy qavtspssgl ytntetlfsd setssvnssq
      481 eakgpskllw lqsrtqsdmp rmekkhfhge ldvnfnpqat sleysdsset egvhydlekr
      541 srrwkknkat sedlceeknq akankmnlsq dfddlsetdi snedqhhdvk pelmedelks
      601 rlfqlaakms dketssgeeq esepgidlen qkeslsseen grsiqeelkk kysavslcni
      661 stevlkvina teeliaestd pcdfpddiqd rgrgtlplgt dpvrldeqlt tleenvylta
      721 stvyglegql tnledaarki nsvteesela dledqvataa aqvhhaelqi sdiesrisal
      781 tvaglnvapc vrltrkrdqk qtnqmhtidt srqqrrklpa ppikgekidg spvttvrtfn
      841 rnfmlqgslt qrtkerksta kdlmepaigs avmy
//
LOCUS       XP_041322664             871 aa            linear   VRT 06-MAY-2021
DEFINITION  rab effector MyRIP isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322664
VERSION     XP_041322664.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466730.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..871
                     /product="rab effector MyRIP isoform X3"
                     /calculated_mol_wt=97841
     Region          8..125
                     /region_name="FYVE_2"
                     /note="FYVE-type zinc finger; pfam02318"
                     /db_xref="CDD:426716"
     Region          152..871
                     /region_name="Rab_eff_C"
                     /note="Rab effector MyRIP/melanophilin C-terminus;
                     pfam04698"
                     /db_xref="CDD:461398"
     CDS             1..871
                     /gene="LOC121353143"
                     /coded_by="XM_041466730.1:172..2787"
                     /db_xref="GeneID:121353143"
ORIGIN      
        1 mgrkldlsgl tdeeaehvlq vvqrdfslrk keeerlsemk qkldeegnkc silskqqkfn
       61 ehccirccsp ftflinskrq cqdckynick scstyqkkek awicsvcqqa rllrtqsldw
      121 yynnvksrfk cfgsakvlkn lykkhrlesg lcpdaiaegs lcegsfeneg sicgsdstfy
      181 qqteghsmmd tlavalrvae eaveeaiska etysdsldkq neacylqehk edlieelatt
      241 ivqkiikkqk skpeqaeadv ewppsrssgl asgavsdqsm ltfpgsrrgs ytlwrsqsaf
      301 slasedmask gqdpassvae algrqqkgqs rkqkehkhsa lpswksvdrl netsdqaleq
      361 vaqrccgvpf tediqesgcn pvpcagppsv fqstdgnwva lqnvtlprpr mlakpksqvf
      421 kalesessiv saydemgsds eddydwnval nklrrrprql pddfyysnsq ygtewvygnd
      481 qyqavtspss glytntetlf sdsetssvns sqeakgpskl lwlqsrtqsd mprmekkhfh
      541 geldvnfnpq atsleysdss etegvhydle krsrrwkknk atsedlceek nqakankmnl
      601 sqdfddlset disnedqhhd vkpelmedel ksrlfqlaak msdketssge eqesepgidl
      661 enqkeslsse engrsiqeel kkkysavslc nistevlkvi nateeliaes tdpcdfpddi
      721 qdrgrgtlpl gtdpvrldeq lttleenvyl tastvygleg qltnledaar kinsvteese
      781 ladledqvat aaaqvhhael qmhtidtsrq qrrklpappi kgekidgspv ttvrtfnrnf
      841 mlqgsltqrt kerkstakdl mepaigsavm y
//
LOCUS       XP_041322665             584 aa            linear   VRT 06-MAY-2021
DEFINITION  insulin-like growth factor 2 mRNA-binding protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322665
VERSION     XP_041322665.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466731.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..584
                     /product="insulin-like growth factor 2 mRNA-binding
                     protein 3"
                     /calculated_mol_wt=64212
     Region          1..77
                     /region_name="RRM1_IGF2BP3"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     insulin-like growth factor 2 mRNA-binding protein 3
                     (IGF2BP3); cd12627"
                     /db_xref="CDD:410036"
     Region          81..156
                     /region_name="RRM2_IGF2BP3"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     insulin-like growth factor 2 mRNA-binding protein 3
                     (IGF2BP3); cd12630"
                     /db_xref="CDD:410039"
     Region          198..273
                     /region_name="KH-I_IGF2BP1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in insulin-like growth factor 2 mRNA-binding protein
                     1 (IGF2BP1) and similar proteins; cd22490"
                     /db_xref="CDD:411918"
     Site            order(206,208..210,212..216,219..220,223..224,229..232)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411918"
     Region          276..370
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     Region          406..483
                     /region_name="KH-I_IGF2BP3_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in insulin-like growth factor 2 mRNA-binding protein
                     3 (IGF2BP3) and similar proteins; cd22498"
                     /db_xref="CDD:411926"
     Site            order(421..423,425..429,432..433,443..447,456)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411926"
     Region          491..562
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     CDS             1..584
                     /gene="IGF2BP3"
                     /coded_by="XM_041466731.1:146..1900"
                     /db_xref="GeneID:121353144"
ORIGIN      
        1 mnklyignlg envspldles lfkdskipfs gqflvktgya fvdcpdeswa mkaiealsgk
       61 velhgkliev ehsvpkrqrs rklqirnipp hlqwevldsl laqygtvenc eqvntdteta
      121 vvnvtygnkd qarqaiekln gfqlenyslk vayipdemaa qqppqqhpqg rrgfgqrgpp
      181 rqgspgattr qkpqsdvplr mlvptqfvga iigkegatir nitkqtqski dihrkenaga
      241 aekpitihst pegcstacki imeimqkeaq dtkfteeipl kilahnnfvg rligkegrnl
      301 kkieqdtdtk itisplqdlt lynpertitv kgsietcaka eeeimkkire syendiaamn
      361 lqahlipgln lnalglfpps ssgipppavs vasaaaaasy ppfgqqpese tvhlfipala
      421 vgaiigkqgq hikqlsrfag asikiapaeg pdaklrmvii tgppeaqfka qgriygklke
      481 enffgpkeev kleahikvps yaagrvigkg gktvnelqnl tsaevvvprd qtpdendqvv
      541 vkitghfyac qlaqrkiqei laqvrrqqqq qktlqsgqpq prrk
//
LOCUS       XP_041322666             201 aa            linear   VRT 06-MAY-2021
DEFINITION  tetranectin [Pyrgilauda ruficollis].
ACCESSION   XP_041322666
VERSION     XP_041322666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466732.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="tetranectin"
                     /calculated_mol_wt=22189
     Region          70..198
                     /region_name="CLECT_tetranectin_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in the tetranectin (TN), cartilage derived C-type lectin
                     (CLECSF1), and stem cell growth factor (SCGF); cd03596"
                     /db_xref="CDD:153066"
     Site            order(136,140,167,170..171)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153066"
     Site            order(163,165,170,185)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:153066"
     Site            order(170,174,176,182,184..187,190..192)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153066"
     CDS             1..201
                     /gene="CLEC3B"
                     /coded_by="XM_041466732.1:225..830"
                     /db_xref="GeneID:121353145"
ORIGIN      
        1 malrgaclll cllslaqlsd qqngkarqkp aaskkdgvsl kmiedlkami dnisqevall
       61 kekqalqtvc lkgtkihlkc flafsetkty heasencisq ggtlstpqng eendalydym
      121 rksigseaev wlglndmate akwvdmtgsp iryknwetei ttqpdggkle ncaalsgtan
      181 gkwfdkrcre qlpyicqfmi v
//
LOCUS       XP_041322667             796 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol kinase beta [Pyrgilauda ruficollis].
ACCESSION   XP_041322667
VERSION     XP_041322667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..796
                     /product="diacylglycerol kinase beta"
                     /calculated_mol_wt=90121
     Region          6..153
                     /region_name="DAG_kinase_N"
                     /note="Diacylglycerol kinase N-terminus; pfam14513"
                     /db_xref="CDD:464196"
     Region          157..226
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(166,168,170,177,211,213,215,222)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          242..307
                     /region_name="C1_DGKbeta_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase beta (DAG kinase
                     beta) and similar proteins; cd20845"
                     /db_xref="CDD:410395"
     Site            order(254..260,268..272,275)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410395"
     Region          312..370
                     /region_name="C1_DGKbeta_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase beta (DAG kinase
                     beta) and similar proteins; cd20891"
                     /db_xref="CDD:410441"
     Site            order(319..323,331..335,339)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410441"
     Region          432..553
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          574..754
                     /region_name="DAGKa"
                     /note="Diacylglycerol kinase accessory domain (presumed);
                     smart00045"
                     /db_xref="CDD:214486"
     CDS             1..796
                     /gene="DGKB"
                     /coded_by="XM_041466733.1:321..2711"
                     /db_xref="GeneID:121353146"
ORIGIN      
        1 mtsqekwvnl spgefsqlqk yaeystkkik dvleefhgsg vlakynpegt idlegfklfm
       61 ktfleaelpd dfiehlftsf rskishcspl iknkpqhlsg vkvseerwkq vpglrlnkgt
      121 stsrpptpan shlpdmiqlk divcylslle rgrpedklef mfrlydtdgn gyldsselen
      181 iiaqmmhvae ylewditels pilhemmeei dydhdgtvsl eewiqggmtt ipllvllgle
      241 nnvkddgqhv wrlkhfnkpa ycnlclnmli gvgkqglccs fckytvherc vsrapascik
      301 tyvkskkntd vmhhfwvegn cptkcdkchk tikcyqgltg lhcvwcqitl hnkcashlkp
      361 ecdcgplkdh ilpptsicpv vlerqatvkk ekscpqqmnk lgernkmqra nsvtvdgqgl
      421 qitpvpgthp llvfvnpksg gkqgeriyrk fqyllnprqv yslsgngpmp glnffrdvae
      481 frvlacggdg tvgwildcie kanlikhppv ailplgtgnd larclrwggg yegenlmkil
      541 kdiensseil ldrwkfevip ndkdekgdpv pyniinnyfs igvdasiahr fhimrekhpe
      601 kfnsrmknkf wyfefgtset fsatckklhe sveiecdgiq ldlinisleg iailnipsmh
      661 ggsnlwgetk krrshrrtek krsdkrttvi dakelkfvcq dlsdqlmevv glegamemgq
      721 iytglksagr rlaqcssvvi rtskslpmqi dgepwmqtpc tikithknqa pmlmgpppkt
      781 glfssiikrt rnhske
//
LOCUS       XP_041322668             176 aa            linear   VRT 06-MAY-2021
DEFINITION  CKLF-like MARVEL transmembrane domain-containing protein 7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322668
VERSION     XP_041322668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..176
                     /product="CKLF-like MARVEL transmembrane domain-containing
                     protein 7"
                     /calculated_mol_wt=18778
     Region          41..160
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..176
                     /gene="CMTM7"
                     /coded_by="XM_041466734.1:48..578"
                     /db_xref="GeneID:121353147"
ORIGIN      
        1 mshgarvirt gvssggpaap ppvtvasssa gsdaelmdgg yfrscagmlk vaqmisllig
       61 fisvnnspwt dysaysffqi vtmcdlvmil ffyimhifrv yrkltcvswp laeflhylig
      121 tillligsiv aaaksynitg lvagatfgfl atilcvismw ssykvscitq stnasv
//
LOCUS       XP_041322669             441 aa            linear   VRT 06-MAY-2021
DEFINITION  T-box transcription factor TBX20 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322669
VERSION     XP_041322669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="T-box transcription factor TBX20 isoform X1"
                     /calculated_mol_wt=48579
     Region          94..283
                     /region_name="T-box_TBX20-like"
                     /note="DNA-binding domain of T-box transcription factor 20
                     and related T-box proteins; cd20193"
                     /db_xref="CDD:410319"
     Site            order(121..122,155,201,204,217..218,259..262,267,270..271,
                     274..280)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410319"
     Region          <350..407
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..441
                     /gene="TBX20"
                     /coded_by="XM_041466735.1:73..1398"
                     /db_xref="GeneID:121353148"
ORIGIN      
        1 meytpppkpq lssranafsi aalmssgssk dkespestik pleqfvekss caqplsdlss
       61 ldphgdfsss psslctepli pttpiipsee makiscslet kelwdkfhel gtemiitksg
      121 rrmfptirvs fsgvdpeaky ivlmdivpvd nkryryayhr sswlvagkad pplparlyvh
      181 pdspftgeql lkqmvsfekv kltnneldqh ghiilnsmhk yqprvhiikk kdhtasllnl
      241 kseefrtfif petvftavta yqnqlitklk idsnpfakgf rdssrltdie resvesliqk
      301 hsyarspirt yggeddlgdd sqatqsrgsa fttsdnlsls swvssstsfp gfqhpqslsa
      361 lgtstasiat piphpiqgsl ppysrlgmpl tpsaiassmq ghkipglqrs svgwkscevp
      421 rnrsssivlv ceckqgdksl s
//
LOCUS       XP_041322670             440 aa            linear   VRT 06-MAY-2021
DEFINITION  T-box transcription factor TBX20 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322670
VERSION     XP_041322670.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466736.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="T-box transcription factor TBX20 isoform X2"
                     /calculated_mol_wt=48628
     Region          94..283
                     /region_name="T-box_TBX20-like"
                     /note="DNA-binding domain of T-box transcription factor 20
                     and related T-box proteins; cd20193"
                     /db_xref="CDD:410319"
     Site            order(121..122,155,201,204,217..218,259..262,267,270..271,
                     274..280)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410319"
     Region          <350..>402
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..440
                     /gene="TBX20"
                     /coded_by="XM_041466736.1:73..1395"
                     /db_xref="GeneID:121353148"
ORIGIN      
        1 meytpppkpq lssranafsi aalmssgssk dkespestik pleqfvekss caqplsdlss
       61 ldphgdfsss psslctepli pttpiipsee makiscslet kelwdkfhel gtemiitksg
      121 rrmfptirvs fsgvdpeaky ivlmdivpvd nkryryayhr sswlvagkad pplparlyvh
      181 pdspftgeql lkqmvsfekv kltnneldqh ghiilnsmhk yqprvhiikk kdhtasllnl
      241 kseefrtfif petvftavta yqnqlitklk idsnpfakgf rdssrltdie resvesliqk
      301 hsyarspirt yggeddlgdd sqatqsrgsa fttsdnlsls swvssstsfp gfqhpqslsa
      361 lgtstasiat piphpiqgsl ppysrlgmpl tpsaiassmq gsgptfpsfh mpryhhyfqq
      421 gpyaaiqglr hssavmtpfv
//
LOCUS       XP_041322671             406 aa            linear   VRT 06-MAY-2021
DEFINITION  T-box transcription factor TBX20 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322671
VERSION     XP_041322671.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466737.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..406
                     /product="T-box transcription factor TBX20 isoform X3"
                     /calculated_mol_wt=44820
     Region          94..283
                     /region_name="T-box_TBX20-like"
                     /note="DNA-binding domain of T-box transcription factor 20
                     and related T-box proteins; cd20193"
                     /db_xref="CDD:410319"
     Site            order(121..122,155,201,204,217..218,259..262,267,270..271,
                     274..280)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410319"
     Region          <350..>401
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..406
                     /gene="TBX20"
                     /coded_by="XM_041466737.1:73..1293"
                     /db_xref="GeneID:121353148"
ORIGIN      
        1 meytpppkpq lssranafsi aalmssgssk dkespestik pleqfvekss caqplsdlss
       61 ldphgdfsss psslctepli pttpiipsee makiscslet kelwdkfhel gtemiitksg
      121 rrmfptirvs fsgvdpeaky ivlmdivpvd nkryryayhr sswlvagkad pplparlyvh
      181 pdspftgeql lkqmvsfekv kltnneldqh ghiilnsmhk yqprvhiikk kdhtasllnl
      241 kseefrtfif petvftavta yqnqlitklk idsnpfakgf rdssrltdie resvesliqk
      301 hsyarspirt yggeddlgdd sqatqsrgsa fttsdnlsls swvssstsfp gfqhpqslsa
      361 lgtstasiat piphpiqgsl ppysrlgmpl tpsaiassmq aenhld
//
LOCUS       XP_041322673             368 aa            linear   VRT 06-MAY-2021
DEFINITION  T-box transcription factor TBX20 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322673
VERSION     XP_041322673.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466739.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..368
                     /product="T-box transcription factor TBX20 isoform X4"
                     /calculated_mol_wt=41149
     Region          94..283
                     /region_name="T-box_TBX20-like"
                     /note="DNA-binding domain of T-box transcription factor 20
                     and related T-box proteins; cd20193"
                     /db_xref="CDD:410319"
     Site            order(121..122,155,201,204,217..218,259..262,267,270..271,
                     274..280)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410319"
     CDS             1..368
                     /gene="TBX20"
                     /coded_by="XM_041466739.1:73..1179"
                     /db_xref="GeneID:121353148"
ORIGIN      
        1 meytpppkpq lssranafsi aalmssgssk dkespestik pleqfvekss caqplsdlss
       61 ldphgdfsss psslctepli pttpiipsee makiscslet kelwdkfhel gtemiitksg
      121 rrmfptirvs fsgvdpeaky ivlmdivpvd nkryryayhr sswlvagkad pplparlyvh
      181 pdspftgeql lkqmvsfekv kltnneldqh ghiilnsmhk yqprvhiikk kdhtasllnl
      241 kseefrtfif petvftavta yqnqlitklk idsnpfakgf rdssrltdie resvesliqk
      301 hsyarspirt yggeddlgdd sqatqsrghk ipglqrssvg wkscevprnr sssivlvcec
      361 kqgdksls
//
LOCUS       XP_041322674             349 aa            linear   VRT 06-MAY-2021
DEFINITION  T-box transcription factor TBX20 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322674
VERSION     XP_041322674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..349
                     /product="T-box transcription factor TBX20 isoform X5"
                     /calculated_mol_wt=39109
     Region          94..283
                     /region_name="T-box_TBX20-like"
                     /note="DNA-binding domain of T-box transcription factor 20
                     and related T-box proteins; cd20193"
                     /db_xref="CDD:410319"
     Site            order(121..122,155,201,204,217..218,259..262,267,270..271,
                     274..280)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410319"
     CDS             1..349
                     /gene="TBX20"
                     /coded_by="XM_041466740.1:73..1122"
                     /db_xref="GeneID:121353148"
ORIGIN      
        1 meytpppkpq lssranafsi aalmssgssk dkespestik pleqfvekss caqplsdlss
       61 ldphgdfsss psslctepli pttpiipsee makiscslet kelwdkfhel gtemiitksg
      121 rrmfptirvs fsgvdpeaky ivlmdivpvd nkryryayhr sswlvagkad pplparlyvh
      181 pdspftgeql lkqmvsfekv kltnneldqh ghiilnsmhk yqprvhiikk kdhtasllnl
      241 kseefrtfif petvftavta yqnqlitklk idsnpfakgf rdssrltdie resvesliqk
      301 hsyarspirt yggeddlgdd sqatqsrglt swaphhlcrc atccpfsll
//
LOCUS       XP_041322675             131 aa            linear   VRT 06-MAY-2021
DEFINITION  maturin [Pyrgilauda ruficollis].
ACCESSION   XP_041322675
VERSION     XP_041322675.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466741.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="maturin"
                     /calculated_mol_wt=14802
     Region          12..131
                     /region_name="DUF4581"
                     /note="Domain of unknown function (DUF4581); pfam15167"
                     /db_xref="CDD:291823"
     CDS             1..131
                     /gene="MTURN"
                     /coded_by="XM_041466741.1:24..419"
                     /db_xref="GeneID:121353151"
ORIGIN      
        1 mafealaeaa erwcartpfq liaaeeterr mdfyaepgvs fyvlcpeaac gdnfhvwses
       61 edclpflqla qdyisscgkk tlheilekvf ksfrpllglp dvdddafeey nadveeeepe
      121 adhqqmgvsq q
//
LOCUS       XP_041322677             131 aa            linear   VRT 06-MAY-2021
DEFINITION  maturin [Pyrgilauda ruficollis].
ACCESSION   XP_041322677
VERSION     XP_041322677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="maturin"
                     /calculated_mol_wt=14802
     Region          12..131
                     /region_name="DUF4581"
                     /note="Domain of unknown function (DUF4581); pfam15167"
                     /db_xref="CDD:291823"
     CDS             1..131
                     /gene="MTURN"
                     /coded_by="XM_041466743.1:24..419"
                     /db_xref="GeneID:121353151"
ORIGIN      
        1 mafealaeaa erwcartpfq liaaeeterr mdfyaepgvs fyvlcpeaac gdnfhvwses
       61 edclpflqla qdyisscgkk tlheilekvf ksfrpllglp dvdddafeey nadveeeepe
      121 adhqqmgvsq q
//
LOCUS       XP_041322678             468 aa            linear   VRT 06-MAY-2021
DEFINITION  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322678
VERSION     XP_041322678.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466744.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase,
                     mitochondrial"
                     /calculated_mol_wt=49321
     Region          49..465
                     /region_name="fabF"
                     /note="beta-ketoacyl-acyl-carrier-protein synthase II;
                     TIGR03150"
                     /db_xref="CDD:274452"
     Site            order(160,167..168,172,174..175,187,193,197,201,207,209,
                     211..213,225,228..229,232,253..254,257..258,317..321,335,
                     457,459)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238430"
     Site            order(216,357,394)
                     /site_type="active"
                     /db_xref="CDD:238430"
     CDS             1..468
                     /gene="OXSM"
                     /coded_by="XM_041466744.1:166..1572"
                     /db_xref="GeneID:121353152"
ORIGIN      
        1 mcliiatmfs qcsrdllkia nlhlrslnvn lhlqnqrraf skslpacrrk vvvtgiglvs
       61 plgvgtqfvw khlleggsgi tsldgeeyag ipcrvaacvp rgnkegqfse esfvskseik
      121 smssatvmai saaelamkds gwspqseqdr ltagvaigmg mvpleeisdt aalfktkgyn
      181 kvspffvpki lvnmaaghis ikyqlkgpnh avstacttga havgdsfrfi aagdadvmla
      241 ggteacispl slagfarara lstsfnsspk aacrpfdsqr egfvmgegaa vlvleeygha
      301 vqrgariyae vlgyglsgda chitapnpeg dgafrcmsaa ikdsgikaed vtyvnahats
      361 tplgdaaenq aikrlfkdhs rniavsstkg atghllgaag aieaaftals cyhgmlpptl
      421 nlqkteaefd lnyvpltaqe wktdkrrial tnsfgfggtn atlcfasv
//
LOCUS       XP_041322679             188 aa            linear   VRT 06-MAY-2021
DEFINITION  fer3-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322679
VERSION     XP_041322679.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466745.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="fer3-like protein"
                     /calculated_mol_wt=20782
     Region          116..179
                     /region_name="bHLH_TS_FERD3L_NATO3"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     Fer3-like protein (FERD3L) and similar proteins; cd11415"
                     /db_xref="CDD:381421"
     Site            order(125,129,131..133,135,140,158..161)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381421"
     Site            order(138..139,142..143,145..146,162,165,169,171..172,176,
                     178..179)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381421"
     CDS             1..188
                     /gene="FERD3L"
                     /coded_by="XM_041466745.1:1..567"
                     /db_xref="GeneID:121353153"
ORIGIN      
        1 msaslfpahq rpglldelhg rapqvpcpeg llgtsvldfv adlslgspqe apragaglgl
       61 cevttgppfg drvlslregm arglplaafg ngdpedeeee eeermrsasl ldrprrkrvi
      121 tyaqrqaani rerkrmfnln eafdqlrkkv ptfayekrls rietlrlaiv yisfmtelld
      181 gcsrqeas
//
LOCUS       XP_041322680             139 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly factor 1 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322680
VERSION     XP_041322680.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466746.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="cytochrome c oxidase assembly factor 1 homolog"
                     /calculated_mol_wt=15258
     Region          13..126
                     /region_name="Coa1"
                     /note="Cytochrome oxidase complex assembly protein 1;
                     pfam08695"
                     /db_xref="CDD:430157"
     CDS             1..139
                     /gene="LOC121353154"
                     /coded_by="XM_041466746.1:311..730"
                     /db_xref="GeneID:121353154"
ORIGIN      
        1 mpaslrklqq mavfmglfsg ggcivmynlm qksfartqyy qqaleqlnsn pdalaalgap
       61 plkvhnirlt dgsnrvdter ariklpvsgt ksagylyids emdhsrqcwc lqdvtlklrd
      121 gqnipiyhsp vgsigvqeg
//
LOCUS       XP_041322681             139 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly factor 1 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322681
VERSION     XP_041322681.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466747.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="cytochrome c oxidase assembly factor 1 homolog"
                     /calculated_mol_wt=15258
     Region          13..126
                     /region_name="Coa1"
                     /note="Cytochrome oxidase complex assembly protein 1;
                     pfam08695"
                     /db_xref="CDD:430157"
     CDS             1..139
                     /gene="LOC121353154"
                     /coded_by="XM_041466747.1:380..799"
                     /db_xref="GeneID:121353154"
ORIGIN      
        1 mpaslrklqq mavfmglfsg ggcivmynlm qksfartqyy qqaleqlnsn pdalaalgap
       61 plkvhnirlt dgsnrvdter ariklpvsgt ksagylyids emdhsrqcwc lqdvtlklrd
      121 gqnipiyhsp vgsigvqeg
//
LOCUS       XP_041322682             139 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly factor 1 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322682
VERSION     XP_041322682.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466748.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="cytochrome c oxidase assembly factor 1 homolog"
                     /calculated_mol_wt=15258
     Region          13..126
                     /region_name="Coa1"
                     /note="Cytochrome oxidase complex assembly protein 1;
                     pfam08695"
                     /db_xref="CDD:430157"
     CDS             1..139
                     /gene="LOC121353154"
                     /coded_by="XM_041466748.1:427..846"
                     /db_xref="GeneID:121353154"
ORIGIN      
        1 mpaslrklqq mavfmglfsg ggcivmynlm qksfartqyy qqaleqlnsn pdalaalgap
       61 plkvhnirlt dgsnrvdter ariklpvsgt ksagylyids emdhsrqcwc lqdvtlklrd
      121 gqnipiyhsp vgsigvqeg
//
LOCUS       XP_041322683             139 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly factor 1 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322683
VERSION     XP_041322683.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466749.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="cytochrome c oxidase assembly factor 1 homolog"
                     /calculated_mol_wt=15258
     Region          13..126
                     /region_name="Coa1"
                     /note="Cytochrome oxidase complex assembly protein 1;
                     pfam08695"
                     /db_xref="CDD:430157"
     CDS             1..139
                     /gene="LOC121353154"
                     /coded_by="XM_041466749.1:354..773"
                     /db_xref="GeneID:121353154"
ORIGIN      
        1 mpaslrklqq mavfmglfsg ggcivmynlm qksfartqyy qqaleqlnsn pdalaalgap
       61 plkvhnirlt dgsnrvdter ariklpvsgt ksagylyids emdhsrqcwc lqdvtlklrd
      121 gqnipiyhsp vgsigvqeg
//
LOCUS       XP_041322684             139 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly factor 1 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322684
VERSION     XP_041322684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="cytochrome c oxidase assembly factor 1 homolog"
                     /calculated_mol_wt=15258
     Region          13..126
                     /region_name="Coa1"
                     /note="Cytochrome oxidase complex assembly protein 1;
                     pfam08695"
                     /db_xref="CDD:430157"
     CDS             1..139
                     /gene="LOC121353154"
                     /coded_by="XM_041466750.1:110..529"
                     /db_xref="GeneID:121353154"
ORIGIN      
        1 mpaslrklqq mavfmglfsg ggcivmynlm qksfartqyy qqaleqlnsn pdalaalgap
       61 plkvhnirlt dgsnrvdter ariklpvsgt ksagylyids emdhsrqcwc lqdvtlklrd
      121 gqnipiyhsp vgsigvqeg
//
LOCUS       XP_041322685             139 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly factor 1 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322685
VERSION     XP_041322685.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466751.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="cytochrome c oxidase assembly factor 1 homolog"
                     /calculated_mol_wt=15258
     Region          13..126
                     /region_name="Coa1"
                     /note="Cytochrome oxidase complex assembly protein 1;
                     pfam08695"
                     /db_xref="CDD:430157"
     CDS             1..139
                     /gene="LOC121353154"
                     /coded_by="XM_041466751.1:446..865"
                     /db_xref="GeneID:121353154"
ORIGIN      
        1 mpaslrklqq mavfmglfsg ggcivmynlm qksfartqyy qqaleqlnsn pdalaalgap
       61 plkvhnirlt dgsnrvdter ariklpvsgt ksagylyids emdhsrqcwc lqdvtlklrd
      121 gqnipiyhsp vgsigvqeg
//
LOCUS       XP_041322686             418 aa            linear   VRT 06-MAY-2021
DEFINITION  D-ribitol-5-phosphate cytidylyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041322686
VERSION     XP_041322686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="D-ribitol-5-phosphate cytidylyltransferase"
                     /calculated_mol_wt=45889
     Region          15..242
                     /region_name="CDP-ME_synthetase"
                     /note="CDP-ME synthetase is involved in
                     mevalonate-independent isoprenoid production; cd02516"
                     /db_xref="CDD:133009"
     Site            order(20,22..27,34,91..94,97,125..127,232)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133009"
     Site            order(128,147,155,157,175..180,207..208,210..211,214,219,
                     221..223,227..228)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133009"
     Region          252..418
                     /region_name="ISPD_C"
                     /note="D-ribitol-5-phosphate cytidylyltransferase
                     C-terminal domain; pfam18706"
                     /db_xref="CDD:465843"
     CDS             1..418
                     /gene="CRPPA"
                     /coded_by="XM_041466752.1:187..1443"
                     /db_xref="GeneID:121353156"
ORIGIN      
        1 mepgsrgaap ggvsvsavlp aggsgerlgg atpkqfcavq grplvsyavr ameriswisd
       61 iivvvspeni etmktiveky ghkrvtvveg gitrhrsifn glkvlaenef sshlvqkpev
      121 viihdavrpf veedivskvv maakehgaag airplvstvi asaadgcldh sleraryras
      181 empqaflfdi iyeayqqctd ydldygtecl hlalkycktn aklvegtadl wkvtykrdly
      241 aaesiikdnl sqqvcvitdv ketlaqvgfl lpeslksqik veaisislsk ndsclqniis
      301 gqcynfvcin dkkwaiqetq elvdmleksn ipllcpvvli lvhldipenn sfsigmedlt
      361 tikkfaretk kknilvygll iqykdplllq etvnsaaali malikdrnpe ligqllva
//
LOCUS       XP_041322687             717 aa            linear   VRT 06-MAY-2021
DEFINITION  adseverin [Pyrgilauda ruficollis].
ACCESSION   XP_041322687
VERSION     XP_041322687.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466753.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..717
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..717
                     /product="adseverin"
                     /calculated_mol_wt=80532
     Region          10..121
                     /region_name="gelsolin_S1_like"
                     /note="Gelsolin sub-domain 1-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11290"
                     /db_xref="CDD:200446"
     Site            order(27..28,66,72..73,75..77,79..81,83..84,95,97)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200446"
     Region          136..225
                     /region_name="gelsolin_S2_like"
                     /note="Gelsolin sub-domain 2-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11289"
                     /db_xref="CDD:200445"
     Region          249..346
                     /region_name="gelsolin_S3_like"
                     /note="Gelsolin sub-domain 3-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11292"
                     /db_xref="CDD:200448"
     Site            order(341,346)
                     /site_type="other"
                     /note="putative nucleotide binding site [chemical
                     binding]"
                     /db_xref="CDD:200448"
     Region          390..486
                     /region_name="gelsolin_S4_like"
                     /note="Gelsolin sub-domain 4-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11293"
                     /db_xref="CDD:200449"
     Site            order(406..407,441,447..448,450..452,454..456,458..459,
                     470,472)
                     /site_type="other"
                     /note="putative actin binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:200449"
     Site            477
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200449"
     Region          508..598
                     /region_name="gelsolin_S5_like"
                     /note="Gelsolin sub-domain 5-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11288"
                     /db_xref="CDD:200444"
     Site            516
                     /site_type="other"
                     /note="putative nucleotide binding residue [chemical
                     binding]"
                     /db_xref="CDD:200444"
     Region          613..711
                     /region_name="gelsolin_S6_like"
                     /note="Gelsolin sub-domain 6-like domain found in
                     gelsolin, severin, villin, and related proteins; cd11291"
                     /db_xref="CDD:200447"
     CDS             1..717
                     /gene="SCIN"
                     /coded_by="XM_041466753.1:10..2163"
                     /db_xref="GeneID:121353157"
ORIGIN      
        1 maperfpaaf aeagqqsglq vwrverlelv pvppsrhgdf fvgdaylvlr terrgdnvay
       61 rlhywlgkec tqdestaaai favqlddylg gkpvqsreiq gyestefvgy fkggikykag
      121 gvasgfnhvv tndlsaqrll hikgrrvvra tevplawtsf nkgdcfiidl gneiyqwcgs
      181 scnkyerlka tqvavgirdn erngrsklit veegsepdrl ievlgkkpel pecdddddel
      241 aditnrrsak lymvsdasgs mkvsvvaeen pfsmamllse ecfildngaa rkifvwkgkn
      301 anpqerraam knaeqfiqqm nypantqiqv lpeggetpmf kqffkdwkdk dqsdgfgkvy
      361 vtervakieq iefdatklhe spqmaaqhnm iddgsgkvei wrvessgrvp vgpetygqfy
      421 ggdcyiilyt yprgkiiytw qgahatkdel tasafltvql drslndqavq irvsqgkepa
      481 hllslfknkp livykdgtsk kegqkpappt rlfqirrnla sitriaevdv davslnsndv
      541 fvlklpnnsg ytwigkgask eeeqgaqyia nvlkcqtani negqepeefw kalggkknyq
      601 tssqlltkae dhpprlygcs nktgrfiiee vpgeftqddl aeddvmlldv weqvfiwigk
      661 daneterqes vksakryiet dpsgrdkgtp ivivkqghep ptftgwflaw dsnkwkn
//
LOCUS       XP_041322689             289 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor 141 [Pyrgilauda ruficollis].
ACCESSION   XP_041322689
VERSION     XP_041322689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466755.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="probable G-protein coupled receptor 141"
                     /calculated_mol_wt=32948
     Region          27..289
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          29..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          62..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          99..121
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          136..152
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          179..202
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          226..248
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          262..287
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..289
                     /gene="LOC121353159"
                     /coded_by="XM_041466755.1:266..1135"
                     /db_xref="GeneID:121353159"
ORIGIN      
        1 msmlnscitq qnhtsngtvl dsseklhavl ivlyiinlag gtlgvimmsq qlfqrrsqsv
       61 mtimiisllv lhsfmllsip frlsyyilge wkfgrfacrl asaiiylhmy atfafysaii
      121 varlrrlefr kcytaawvga vwllgalvvt pvllsyygts ktyrscecfq fhkelqeahm
      181 vianyclvgi lvaacavltg iqltviyrva mkywpdinsh vefraqaksf ffilvtlvcf
      241 mphhvfrvyy iqnydldkdh klllynevfl alatmccldm lcfiagiah
//
LOCUS       XP_041322690             608 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322690
VERSION     XP_041322690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466756.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="kelch-like protein 7 isoform X1"
                     /calculated_mol_wt=67404
     Region          170..259
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          346..579
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          394..438
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          442..490
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          493..537
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..608
                     /gene="KLHL7"
                     /coded_by="XM_041466756.1:229..2055"
                     /db_xref="GeneID:121353160"
ORIGIN      
        1 mssgpapgtr prdtpsdggv ssrkatptra aplrlprtrp prvaaeplpa lclprvgpra
       61 grwrqrarpr papppgrirr gdqrrsgaar vppvspprrp apahavrlpa aggrmfpggv
      121 galavsageh grarvgeeqq eedgeearrp rggeaarllh grherhaqag isvlaecldc
      181 pelkataddf ihqhftevyk tdeflqldvk rvthllnqdt ltvraedqvy daavrwlkyd
      241 epnrqpymvd ilakvrfpli sknflsktvq aepliqdnpe clkmvisgmr yhllspedre
      301 elvegtrprr kkhdyrialf ggsqpqscry fnpkdyswtd ircpfekrrd aacvfwdnvv
      361 yilggsqlfp ikrmdcynvv kdswysklgp ptprdslaac aaegkiytsg gsevgnsaly
      421 lfecydtrte swhtkpsmlt qrcshgmvea ngliyvcggs lgnnvsgrvl nscevydpat
      481 etwtelcpmi earknhglvf vkdkifavgg qnslggldnv eyydikmnew kmvspmpwkg
      541 vtvkcaavgs ivyvlagfqg vgrlghiley ntetdkwian skvrafpvts clicvvdtcg
      601 aneetlei
//
LOCUS       XP_041322691             586 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322691
VERSION     XP_041322691.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466757.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="kelch-like protein 7 isoform X2"
                     /calculated_mol_wt=65966
     Region          23..148
                     /region_name="BTB_POZ_KLHL7"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 7 (KLHL7); cd18237"
                     /db_xref="CDD:349546"
     Region          35..555
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          140..237
                     /region_name="BACK_KLHL7"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 7 (KLHL7); cd18447"
                     /db_xref="CDD:350522"
     Region          372..416
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          420..468
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          471..515
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..586
                     /gene="KLHL7"
                     /coded_by="XM_041466757.1:146..1906"
                     /db_xref="GeneID:121353160"
ORIGIN      
        1 maapgsekss kkktekklaa reeakllasf mgvmnamrkq ktlcdvilmv qerkipahrv
       61 vlasashffn lmfttnmies ksfevelkda epdiieqlve faytarisvn snnvqsllda
      121 anqyqiepvk kmcvdflkeq vdasnclgis vlaecldcpe lkataddfih qhftevyktd
      181 eflqldvkrv thllnqdtlt vraedqvyda avrwlkydep nrqpymvdil akvrfplisk
      241 nflsktvqae pliqdnpecl kmvisgmryh llspedreel vegtrprrkk hdyrialfgg
      301 sqpqscryfn pkdyswtdir cpfekrrdaa cvfwdnvvyi lggsqlfpik rmdcynvvkd
      361 swysklgppt prdslaacaa egkiytsggs evgnsalylf ecydtrtesw htkpsmltqr
      421 cshgmveang liyvcggslg nnvsgrvlns cevydpatet wtelcpmiea rknhglvfvk
      481 dkifavggqn slggldnvey ydikmnewkm vspmpwkgvt vkcaavgsiv yvlagfqgvg
      541 rlghileynt etdkwiansk vrafpvtscl icvvdtcgan eetlei
//
LOCUS       XP_041322692             439 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleoporin NUP42 [Pyrgilauda ruficollis].
ACCESSION   XP_041322692
VERSION     XP_041322692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..439
                     /product="nucleoporin NUP42"
                     /calculated_mol_wt=44939
     Region          3..22
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..439
                     /gene="NUP42"
                     /coded_by="XM_041466758.1:3..1322"
                     /db_xref="GeneID:121353161"
ORIGIN      
        1 mgvcqfflrg ycrfgercwn ehprgaaarp gpppahvtsg rgggggwgts nqrysnviqp
       61 ssfksdtwgg srdhgrgffg ssdfgssggs srnadfsqnr fsalahsqsv adgskdeedr
      121 ilecvvkdme iwessgqwif scyspmkekp nvsgfsdvsp eelrleyyds ranniignyi
      181 davqklalqw knqllqlkal nastkaalls afkttgsqaa pafgmggqqt sgfglsgfpv
      241 ssssrtsass fsfkassslv sstssgsspa agsssaaanp pafgtassps aaqsvgfgsp
      301 aapsaasfsf kaaapaggfg tsgfsgfgsa savnsagttp aafgafgasg atcgspssga
      361 lfgqsasasg hpatsasaaa tnsspasekl ftpkselsae ewqqfeakef tigkiptkpp
      421 plellnafdl lslfrsnmf
//
LOCUS       XP_041322693             222 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322693
VERSION     XP_041322693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466759.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=22790
     CDS             1..222
                     /gene="LOC121353162"
                     /coded_by="XM_041466759.1:272..940"
                     /db_xref="GeneID:121353162"
ORIGIN      
        1 mvprtpgggs agrtrsslgs aglrpprarr rqghpgsrap appaqrarar rggrhaggsr
       61 pcpgaapvll raaaaggssg aerasagavg gsrcsalaga lakglrdgpr grgkparasl
      121 lpgaacsscv fpfspvsvlg sfgrlfrcll seelhleyyd skgynwecvs slkmithgds
      181 lwektcyqss ggnscltylp tlgddqnaki sfnscapkri tk
//
LOCUS       XP_041322694             182 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L32, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041322694
VERSION     XP_041322694.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466760.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="39S ribosomal protein L32, mitochondrial"
                     /calculated_mol_wt=20607
     Region          73..126
                     /region_name="Ribosomal_L32p"
                     /note="Ribosomal L32p protein family; pfam01783"
                     /db_xref="CDD:426430"
     CDS             1..182
                     /gene="MRPL32"
                     /coded_by="XM_041466760.1:39..587"
                     /db_xref="GeneID:121353163"
ORIGIN      
        1 mavlvlvrsp lprlrallqr cwgrlerglw pgvfggqsps wgpalavqgp alvpqginda
       61 gapsllesvv wmaapkqrrt ievnrcrrrh psklveikrn idvcpecgnl kqkhilcgyc
      121 yakvkeetrl irmeiykkeg epfnaptvet vvlyegekpm ekdegkriie rarkrpswfv
      181 qn
//
LOCUS       XP_041322695             595 aa            linear   VRT 06-MAY-2021
DEFINITION  raftlin [Pyrgilauda ruficollis].
ACCESSION   XP_041322695
VERSION     XP_041322695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..595
                     /product="raftlin"
                     /calculated_mol_wt=65142
     Region          1..485
                     /region_name="Raftlin"
                     /note="pfam15250"
                     /db_xref="CDD:464590"
     CDS             1..595
                     /gene="RFTN1"
                     /coded_by="XM_041466761.1:247..2034"
                     /db_xref="GeneID:121353164"
ORIGIN      
        1 mgcglnklek hdekrpgniy stlkrpqvet kidvcyeyrf ldfttlndte lpgssaikls
       61 slydlpaqle elyqqgfvla avhpfvqptd ekektpqeqi fravlikkte rsskgdanse
      121 gyvleveccs slnhlsekke ipdfikkiqd aasqglkfvg iiaqyhsqkn clvstsltpa
      181 snnsvqsrdn knvsnypedh aspdgekkds tdgcstptqs elsadqcats regcrgegqa
      241 teelnsksvk gseeqsehen lsvkeaadkt nglaenetpa rclkpltgka eifalfnkpq
      301 taqkcsqyyt vtipmrisrn gqtvnslean wlehmtdhfr kggslvnaif slgmvndalh
      361 gtmdgvflfe dfavedsktt qgydaivveq wtvlkgvevq tdyvpllnsl amygwqltcv
      421 lptpivktnr egnlstkqiv flqrpslpqk akkkeskfhw rfskedmhnr kmknstkakl
      481 ntrekqraqe kqefevtent rnleaqisra akpdaeqqpd dvidlgeeva gtngsgaqhd
      541 gasaetcpas cdtgdnagqa clsqsvpgcp ageaaegggc sgsdgaavdm dcsce
//
LOCUS       XP_041322697             815 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase DCLK3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322697
VERSION     XP_041322697.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466763.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="serine/threonine-protein kinase DCLK3"
                     /calculated_mol_wt=93198
     Region          86..170
                     /region_name="DCX_DCLK3"
                     /note="Doublecortin-like domain found in doublecortin-like
                     kinase 3 (DCLK3); cd16111"
                     /db_xref="CDD:340528"
     Site            order(86,97..99,105,110..111,113,121,129..131,133..134,
                     137,164)
                     /site_type="other"
                     /note="putative DCX-stabilized microtubules [polypeptide
                     binding]"
                     /db_xref="CDD:340528"
     Site            order(101,145)
                     /site_type="other"
                     /note="key conserved lysines"
                     /db_xref="CDD:340528"
     Region          521..778
                     /region_name="STKc_DCKL3"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Doublecortin-like kinase 3 (also called Doublecortin-like
                     and CAM kinase-like 3); cd14185"
                     /db_xref="CDD:271087"
     Site            order(528..532,536,549,551,581,597..600,604,606,642..643,
                     645,647..648,650,664..665,668,680..684,686)
                     /site_type="active"
                     /db_xref="CDD:271087"
     Site            order(528..531,536,549,551,581,597..600,604,647..648,650,
                     664..665)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271087"
     Site            order(532,604,606,642..643,645,647,668,680..684,686)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271087"
     Site            664..684
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271087"
     CDS             1..815
                     /gene="DCLK3"
                     /coded_by="XM_041466763.1:68..2515"
                     /db_xref="GeneID:121353165"
ORIGIN      
        1 mpaaappplh paagacchcq grqglldhsp rntgskvker klhgtcppvg rgnyekpcls
       61 esshrssffs phngfhtihs ehspvkprii tvvkpggrtl rritlllnrr svqtfeqlma
      121 disealgfpr wkndrvrkly nlrgreirsv seffregdaf iamgkepltl kdlevvlqel
      181 ypenpyaasa aiqtneeqsq klkgrlydka skvdsgfdet eitkncsdgl ssqllagheg
      241 ksqaktkqee kmrtkkkwtr eswggehgvk psrktreser ylnherssee gleesseevl
      301 rcekceqerq areklrrerq aeasfenrdl nagmcqryhv erntkarscr kspetclege
      361 evgwkdsggr rmwkplhriv neglekqkrn iekerdmekh enhgkevvki rksaveglql
      421 shevkedngs scvmnqsgwl kkdtlrdaek mskthregre gqrakeeaar regngtcres
      481 dmtrrektge rrvskednkt qglentsrrh aiksrtdvek hyeigrtigd gnfavvkecr
      541 hcdsnqiyam kivdksklkg kedmmeseil iirslshpni vslievyete aeiylileyv
      601 pggdlfdaii esvkftehda aimitdlcea lvyihskniv hrdlkpenll vqhnadkstt
      661 lkladfglak qvtkpiftvc gtptyvapei laekgyglev dmwaagvily illcgfppfr
      721 sqdrdqeelf qiiqlghyef lspywdnisa aakdlitrll ivdpqkryta rqvlqhpwir
      781 tagktnsrnl qrevtinier hfraqrrkev vdest
//
LOCUS       XP_041322698             273 aa            linear   VRT 06-MAY-2021
DEFINITION  GATA zinc finger domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322698
VERSION     XP_041322698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="GATA zinc finger domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=29391
     CDS             1..273
                     /gene="GATAD1"
                     /coded_by="XM_041466764.1:73..894"
                     /db_xref="GeneID:121353166"
ORIGIN      
        1 mplglkptcs vcrstsssmw kkggqgeilc nnctarsapp ppaafattsa aaaqhsnggg
       61 sggggspsdt grccevstrp spgspapskq eihrrsarlr ntkyksapaa ekkvstkgkg
      121 rrhifklknp ikapesvsti itaesifykg vyyqigdvvs vvdeqdgrty yaqirgfiqd
      181 qyceksaalt wliptqaspk dcfdpasyii gpeedlprkm eylefvchap seyfksrssp
      241 fptvptrpek gyiwthvgpt paisiketva nnl
//
LOCUS       XP_041322699             260 aa            linear   VRT 06-MAY-2021
DEFINITION  GATA zinc finger domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322699
VERSION     XP_041322699.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466765.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..260
                     /product="GATA zinc finger domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=27971
     CDS             1..260
                     /gene="GATAD1"
                     /coded_by="XM_041466765.1:73..855"
                     /db_xref="GeneID:121353166"
ORIGIN      
        1 mplglkptcs vcrstsssmw kkggqgeilc nnctarsapp ppaafattsa aaaqhsnggg
       61 sggggpgpag ggkqskqeih rrsarlrntk yksapaaekk vstkgkgrrh ifklknpika
      121 pesvstiita esifykgvyy qigdvvsvvd eqdgrtyyaq irgfiqdqyc eksaaltwli
      181 ptqaspkdcf dpasyiigpe edlprkmeyl efvchapsey fksrsspfpt vptrpekgyi
      241 wthvgptpai siketvannl
//
LOCUS       XP_041322700             732 aa            linear   VRT 06-MAY-2021
DEFINITION  TLR4 interactor with leucine rich repeats [Pyrgilauda ruficollis].
ACCESSION   XP_041322700
VERSION     XP_041322700.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466766.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="TLR4 interactor with leucine rich repeats"
                     /calculated_mol_wt=79195
     Region          33..>58
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          44..62
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          65..>319
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          66..88
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          89..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          137..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          185..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          258..281
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          282..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          305..362
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          306..327
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          330..353
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          362..407
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     CDS             1..732
                     /gene="TRIL"
                     /coded_by="XM_041466766.1:275..2473"
                     /db_xref="GeneID:121353167"
ORIGIN      
        1 mgaprrvrlm llprvlwgsv plillllpaa epicpepcdc qqhqhllctn rglrsvpkta
       61 epqdiltysl ggnfianisa fdfhrlaglq rldlqynrir slhpkaferl erleelylgn
      121 nllpalapgt lstlaklril yvnaneigrl saasfsglds lvklrldgne lgslgdstfs
      181 glpnllylhl esnrirwlsr gaftglaklr fldlsgnqqs slrhpdifgp lrslhtllla
      241 snslrqltgg lfqhlpglak lslsgnrlsh lapdafrglg slkelrlegn llshlpatll
      301 epldsleald lsrnaltalh paafsrlgrl relslrdnal atlpgelfas slalyrlele
      361 gnawscdcrl rglkrwlaaw hsqgrlltvf vqchlppala gkyldylqda qlplpqdgsp
      421 cpdgaspspp speglggnns aaglppgppp aaftarltmg vpiaasptpa plpsaaawpr
      481 ragaagippl vsdpcdfnkl flhnlsveav gsswvtvrwa vrphrsprll gparfrllfd
      541 rfgaavkfqr fvylpergep aatlrelrpd tpylvcvegv lggrvcpvap rdhcaglvtl
      601 peggtaaaaa ggprgpdqql ltlvllavna llllaalaaw aarllrkkvl grrrrkaapv
      661 hvrqlystrr plrsmgtgvs adfsgfqshr pprgaaacal seadliefpc erfmdsgsgr
      721 hgdehllqrf ad
//
LOCUS       XP_041322701             356 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322701
VERSION     XP_041322701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466767.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="C-C chemokine receptor type 5-like"
                     /calculated_mol_wt=40653
     Region          36..312
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          38..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          280..305
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="LOC121353168"
                     /coded_by="XM_041466767.1:213..1283"
                     /db_xref="GeneID:121353168"
ORIGIN      
        1 mgnetidytn wplttefdyg dstpcmgtee khfaakflpp lyslvvifgl tgnmlvvlil
       61 vkykrlksmt diyllnlais dllfvfslpf wayyavhdwi fgealcrils gvyllgfysg
      121 iffiilltld rylaivhavf alkartvtyg vlasvatwav avlasvpgvv fqktqkeslg
      181 ytcsahypsd stinwkysfi lkmnilgliv pmlimifsys qilktllrsk nekkqkavrl
      241 ifvimifyfi fwtpfhissf lhtfqnslfv pncelkgqle kaiqvtetis mihccinpvi
      301 yvfvgekfra ylytffrkhv aphlckkcps lyreklervs stftqstaeh distgl
//
LOCUS       XP_041322702             356 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322702
VERSION     XP_041322702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="C-C chemokine receptor type 5-like"
                     /calculated_mol_wt=40653
     Region          36..312
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          38..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          280..305
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="LOC121353168"
                     /coded_by="XM_041466768.1:225..1295"
                     /db_xref="GeneID:121353168"
ORIGIN      
        1 mgnetidytn wplttefdyg dstpcmgtee khfaakflpp lyslvvifgl tgnmlvvlil
       61 vkykrlksmt diyllnlais dllfvfslpf wayyavhdwi fgealcrils gvyllgfysg
      121 iffiilltld rylaivhavf alkartvtyg vlasvatwav avlasvpgvv fqktqkeslg
      181 ytcsahypsd stinwkysfi lkmnilgliv pmlimifsys qilktllrsk nekkqkavrl
      241 ifvimifyfi fwtpfhissf lhtfqnslfv pncelkgqle kaiqvtetis mihccinpvi
      301 yvfvgekfra ylytffrkhv aphlckkcps lyreklervs stftqstaeh distgl
//
LOCUS       XP_041322703             709 aa            linear   VRT 06-MAY-2021
DEFINITION  protein DBF4 homolog A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322703
VERSION     XP_041322703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="protein DBF4 homolog A isoform X1"
                     /calculated_mol_wt=79516
     Region          299..339
                     /region_name="zf-DBF"
                     /note="DBF zinc finger; pfam07535"
                     /db_xref="CDD:462197"
     CDS             1..709
                     /gene="DBF4"
                     /coded_by="XM_041466769.1:95..2224"
                     /db_xref="GeneID:121353169"
ORIGIN      
        1 mkpgaaeaad kgarpqdgiq akpekirssl knvkkdtgkp eklkfkpltg kvfyldipsn
       61 viseklgkdl kelggrvesf lskdinylvt nkkeakfapt lgqispvpsp esapnggngs
      121 phpsnrkdrh dgssfrivdt vrmsrgkslv ekaikeqdli psgsilsnal swgvkilhid
      181 dvkncieqkk relylikrag ssskdvgkhv taqksktgrl kspfirvedr srqyrpfylq
      241 llsfpflnyc vpkpyspfev dkkytgqkqt qskernknns dkdcgmpaqf pqkdkkkrgy
      301 ceccgkkyed lqthleserh rnfaqstqye vvddiiskls yefvaykdde tgkikrtkcs
      361 tgyfspiigk itradelker lkkqrialkt yswkdtamqa lkldrqpaev qpnsvpiptp
      421 vsasvcsvlc qplhpselks kfrvnnestk tdcsctvklr eafvssnsmq pplpktdqvc
      481 tenlspafel fsreilepda skknvrcfqe gmdtsyshtq vtdfsdkdrn llqqkrklns
      541 svvlpakclk kadanptfvk krhdlcdnhq qmqhnvflea evsdtalnke lnasaastah
      601 sspsgklhrr vklnlrknkr etqkqdvelr vknsdglsvp eekrstcsss lqtllelfqa
      661 sernsefggs ssytekkcsm gindtcegqn anvlwslfss sssssffgf
//
LOCUS       XP_041322704             708 aa            linear   VRT 06-MAY-2021
DEFINITION  protein DBF4 homolog A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322704
VERSION     XP_041322704.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466770.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="protein DBF4 homolog A isoform X2"
                     /calculated_mol_wt=79445
     Region          298..338
                     /region_name="zf-DBF"
                     /note="DBF zinc finger; pfam07535"
                     /db_xref="CDD:462197"
     CDS             1..708
                     /gene="DBF4"
                     /coded_by="XM_041466770.1:95..2221"
                     /db_xref="GeneID:121353169"
ORIGIN      
        1 mkpgaaeaad kgarpqdgiq akpekirssl knvkkdtgkp eklkfkpltg kvfyldipsn
       61 viseklgkdl kelggrvesf lskdinylvt nkkeakfapt lgqispvpsp esapnggngs
      121 phpsnrkdrh dgssfrivdt vrmsrgkslv ekaikeqdli psgsilsnal swgvkilhid
      181 dvkncieqkk relylikrag ssskdvgkhv taqksksrlk spfirvedrs rqyrpfylql
      241 lsfpflnycv pkpyspfevd kkytgqkqtq skernknnsd kdcgmpaqfp qkdkkkrgyc
      301 eccgkkyedl qthleserhr nfaqstqyev vddiisklsy efvaykddet gkikrtkcst
      361 gyfspiigki tradelkerl kkqrialkty swkdtamqal kldrqpaevq pnsvpiptpv
      421 sasvcsvlcq plhpselksk frvnnestkt dcsctvklre afvssnsmqp plpktdqvct
      481 enlspafelf sreilepdas kknvrcfqeg mdtsyshtqv tdfsdkdrnl lqqkrklnss
      541 vvlpakclkk adanptfvkk rhdlcdnhqq mqhnvfleae vsdtalnkel nasaastahs
      601 spsgklhrrv klnlrknkre tqkqdvelrv knsdglsvpe ekrstcsssl qtllelfqas
      661 ernsefggss sytekkcsmg indtcegqna nvlwslfsss ssssffgf
//
LOCUS       XP_041322705             644 aa            linear   VRT 06-MAY-2021
DEFINITION  protein DBF4 homolog A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322705
VERSION     XP_041322705.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466771.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..644
                     /product="protein DBF4 homolog A isoform X3"
                     /calculated_mol_wt=72484
     Region          234..274
                     /region_name="zf-DBF"
                     /note="DBF zinc finger; pfam07535"
                     /db_xref="CDD:462197"
     CDS             1..644
                     /gene="DBF4"
                     /coded_by="XM_041466771.1:95..2029"
                     /db_xref="GeneID:121353169"
ORIGIN      
        1 mkpgaaeaad kgarpqdgiq akpekirssl knvkkdtgkp eklkfkpltg kvfyldipsn
       61 viseklgkdl kelggvrmsr gkslvekaik eqdlipsgsi lsnalswgvk ilhiddvknc
      121 ieqkkrelyl ikragssskd vgkhvtaqks ktgrlkspfi rvedrsrqyr pfylqllsfp
      181 flnycvpkpy spfevdkkyt gqkqtqsker nknnsdkdcg mpaqfpqkdk kkrgyceccg
      241 kkyedlqthl eserhrnfaq stqyevvddi isklsyefva ykddetgkik rtkcstgyfs
      301 piigkitrad elkerlkkqr ialktyswkd tamqalkldr qpaevqpnsv piptpvsasv
      361 csvlcqplhp selkskfrvn nestktdcsc tvklreafvs snsmqpplpk tdqvctenls
      421 pafelfsrei lepdaskknv rcfqegmdts yshtqvtdfs dkdrnllqqk rklnssvvlp
      481 akclkkadan ptfvkkrhdl cdnhqqmqhn vfleaevsdt alnkelnasa astahsspsg
      541 klhrrvklnl rknkretqkq dvelrvknsd glsvpeekrs tcssslqtll elfqaserns
      601 efggsssyte kkcsmgindt cegqnanvlw slfsssssss ffgf
//
LOCUS       XP_041322706             148 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate dehydrogenase assembly factor 3, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322706
VERSION     XP_041322706.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466772.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..148
                     /product="succinate dehydrogenase assembly factor 3,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=16900
     Region          6..58
                     /region_name="Complex1_LYR_SDHAF3_LYRM10"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     mitochondrial succinate dehydrogenase assembly factor 3
                     (SDHAF3) and similar proteins; cd20270"
                     /db_xref="CDD:380765"
     CDS             1..148
                     /gene="SDHAF3"
                     /coded_by="XM_041466772.1:42..488"
                     /db_xref="GeneID:121353171"
ORIGIN      
        1 maggarrlyr rilqlhralp palrdlgdry vkeefrrhka agpaeaqrfl reweasarrp
       61 agqgrgrerr gpagrraglg knyaaliqqq ikedkqnlre kavygiqlte eklndfrdeq
      121 igqlkelmde atkphkkiti skdseckt
//
LOCUS       XP_041322707             121 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate dehydrogenase assembly factor 3, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322707
VERSION     XP_041322707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..121
                     /product="succinate dehydrogenase assembly factor 3,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=14116
     Region          6..60
                     /region_name="Complex1_LYR_SDHAF3_LYRM10"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     mitochondrial succinate dehydrogenase assembly factor 3
                     (SDHAF3) and similar proteins; cd20270"
                     /db_xref="CDD:380765"
     CDS             1..121
                     /gene="SDHAF3"
                     /coded_by="XM_041466773.1:42..407"
                     /db_xref="GeneID:121353171"
ORIGIN      
        1 maggarrlyr rilqlhralp palrdlgdry vkeefrrhka agpaeaqrfl rewenyaali
       61 qqqikedkqn lrekavygiq lteeklndfr deqigqlkel mdeatkphkk itiskdseck
      121 t
//
LOCUS       XP_041322708             322 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerase I subunit RPA43 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322708
VERSION     XP_041322708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..322
                     /product="DNA-directed RNA polymerase I subunit RPA43"
                     /calculated_mol_wt=35344
     Region          28..115
                     /region_name="RNAP_I_Rpa43_N"
                     /note="Rpa43, N-terminal ribonucleoprotein (RNP) domain.
                     Rpa43 is a subunit of eukaryotic RNA polymerase (RNAP) I
                     that is homologous to Rpb7 of eukaryotic RNAP II, Rpc25 of
                     eukaryotic RNP III, and RpoE of archaeal RNAP. Rpa43 has
                     two domains, an N-terminal RNP...; cd04328"
                     /db_xref="CDD:239820"
     Site            order(36..40,42,69,75,79..81,107,112,114)
                     /site_type="other"
                     /note="putative Rpa14 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239820"
     Region          113..>145
                     /region_name="RPA43_OB"
                     /note="RPA43 OB domain in RNA Pol I; pfam17875"
                     /db_xref="CDD:465545"
     CDS             1..322
                     /gene="POLR1F"
                     /coded_by="XM_041466774.1:62..1030"
                     /db_xref="GeneID:121353172"
ORIGIN      
        1 mavpreppaa palppaaaap sfgaaralva rrhsclvaap hrrhvalppr flgrkrsgir
       61 aqldaellry seslqgvpva ydnikvvgel gdiyddqgfi hldveadfii fspkkgkklv
      121 gvinkvapsh igclihgcfn asipkpeqms ivqwqelglk igdelkfqvl hldsdtagvf
      181 firggltkss mrpkksdavt estngdeiqk fdqqenglnn cgednvteep lnetgnlgre
      241 neeepsvdav nglcddkkkk kkkdkekqge qelvlptsds sgyqsdhkks kkkkrkhcde
      301 veeselsqls ekpkakkkrt ni
//
LOCUS       XP_041322709            3934 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322709
VERSION     XP_041322709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3934
                     /product="A-kinase anchor protein 9 isoform X1"
                     /calculated_mol_wt=454225
     Region          160..>378
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <284..783
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          564..>1010
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          1880..2591
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2632..3480
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <3176..>3489
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          3747..3828
                     /region_name="PACT_coil_coil"
                     /note="Pericentrin-AKAP-450 domain of centrosomal
                     targeting protein; pfam10495"
                     /db_xref="CDD:463115"
     CDS             1..3934
                     /gene="AKAP9"
                     /coded_by="XM_041466775.1:262..12066"
                     /db_xref="GeneID:121353173"
ORIGIN      
        1 medeerlkkl eagkaklaqf rqrkaqtdgq ngskkqkkkk ktasikdees iqdgietdrs
       61 rsdeistcss rrggaatadf aiirtlhsge iikhapayti epeseisttv edyssevngc
      121 sfvtrtaipa dlireeefgv edlhsehgmq hshtqlevme nqlvgkqqei eelsreieem
      181 raaygteglq qlqefeaaik krddiitqlt tnlqqarkek detmreflel teqsqklqiq
      241 fqhlqaseal rnsshsctaa dllqakqqil shqqqleeqe cqlkdyrkkn eefeeqithl
      301 qekimtyeme kqkkegedls klqekealve eleaklgeee knsfqlkekl sdvsklleel
      361 keeislrnqq isnmkaeltt ykqkerqcsd eikqlmgtve elqkrcykds qseadivqrm
      421 eletqrrlaq lhaeldemhg qqivqmkqel ikqhaveier rllqqkvele qtsslffnen
      481 vnkdqmhlmn ikinelnvkl qdadkereki kqelsqqmev iatekslqqt riedllqeln
      541 fsreqvqrak qtivdmecrl neaekyrfvi edlktqlasa sefrkdlevk heaeitnyki
      601 klemlerekd avldrmaesq eaelerlrtn llfsheeels rlredlekeh lvnmeslkhn
      661 lnmhhkqqld evqnemsqki eamqhekdnl itkqnqlile itnlkdlqqs ivnskseemt
      721 lqihelekqi evlrqeekek gtleqeiqel qlktelmqeq mreredtlqk kcseletqnn
      781 vlkgenetle eklknmlvcs eenllcnsnv sskteildlq krienliten eqlknqnsil
      841 qedterqksa fsltekklea gykelqkeca sllkaknele eskkkqeaey ksklkalnek
      901 ichlqsnrpv sfktkpsgfe gskeikvsre diseagevve kdatelmekl qttqrekvel
      961 slrlsdlseq lkskdseich lnekvkslkd ekeqilvkck elevtishaq rrnsssndsk
     1021 kkcskgkslk tatpasesrn kppgsrsktd ggtnsrgnls sgkdcsqevt krkevqqmlk
     1081 peqqsvvehv hgtpdrvtee aslpaitqse nnlqqqvdal kseqtdlqlq meaqriclsl
     1141 vysahvdqvc eslkaekesa lctlkeelvh nhmqemtdlk rmhqlelqtl kfqqgddeek
     1201 stqrliekln eavteecsrl tqvlcgsqne hssaaveavd reqenfckhd veeklsvelp
     1261 vhrdqaqvpg slcnltvqer mdallqkime eysrlkalqt qlmaefkqvk esslssserr
     1321 keeepihmet rkeslqtppq nlmdptiqey cskeignlkk qleeqhalel ehlrsyfqqq
     1381 lkesqeryta elvhlqdklq itgvssdhts vssdserrlk evfrkvkcte nlhqrktdka
     1441 lelgrememq ndldvvqllq kqyqerleee vakvivsmsv afakqtelsg isrqkeeapt
     1501 qivhperihf gikqqhseee vdsllrkatg kgsrnegglk slcselsees getnslgeql
     1561 hcnsspdcil gqtthksvis egllshskgl taeetphsge vvaadtgtdt ssqlllyeer
     1621 ledmrqelvr qyqehqqate llrqghmqqm erqkenqdql laeleslkvq laervsmend
     1681 slvaererml leeleslkqh svpgkerlfc elqnnstqte nenenqndar eqlfehedgg
     1741 rkpdetpsal lskerhvfqk aneklmkill evvkttvame etigqhvlgl ldrsgkvqas
     1801 kqagwdtete esikpcirvg yekescslyh gssmgdddin mwsgaageeg llsqhlaesg
     1861 meidpeneel ilnissrlqa aveklleain etsnqlehak itqtelmres fkkqqeatef
     1921 iryqeelqer lneetkareq lalelskaeg lidgyadeka flekqlqekv diidhleqel
     1981 lctgnklqel eaeqqqvqee kellsrqkda mraeagpveq rlvdaaidaa sqaelleete
     2041 klmkekievq rqaekeyddl qkqvkvleid leeqvsrfve leqeknaelm dlrqqnqale
     2101 kqlektrkfl deqaidrehe rdvfqqeiqk leqqlkipqr sqpvnehqtr eveqltnhlk
     2161 ektdkcsell lskeqlqrdv qerneeiekl ecrireleqa liisadhlqk veerkqfgti
     2221 vvkgelplev qlqaereavd rkekevtnle eqleqfreel enkneevqql hmqleiqrke
     2281 stthlqeleq enklfkdeme vlglaiqkse daaikdhhlv agrlahimqe kdqeiyhlhe
     2341 qiaklqqqle vptdnkviee qnehirelea qveclksdqe rvkkkndeev eqlndvidkl
     2401 qqelaiieqk vptdvadfqe dadspkhile avlaekeale kqveninaea sqtkneleet
     2461 klkmsqlkqe isilkkehar itekykcalv qggkskpedr sngkteqmeg dlcqeidlpd
     2521 qsqlrtsden arvtisrmei qlqqlqacik qkdselcrcy heikdmkeqs kaeketlkkr
     2581 vlelertlme kvaaalvsqv qlnavqeqrr fmqeiqeask cvdeasknaq teglsdrten
     2641 etesklsllt qrlnemedql amvnrslele kenvkvaqre atvkeerfle lqqlleevke
     2701 khkeeiqkyi kqeemqtsqv eaqlmesqke kvliteleqv keeaaaakee lnsyrekaek
     2761 lqqeltvkea slihlqedlc kvkenlvqae ekfaiylrkn kemvkteskk daeiscdlsa
     2821 settltgnss ssqtdktvev spvlvknaei qidlqngcss eeiaeivref tekidqmqel
     2881 haaeimdmet rhisesealk rekfvavqvl teecntlkev ietlqakeri pvsglahspp
     2941 hqardgassd sssdwsqgmy laqtqgsdti segidegets tdllpkkikg llravhhegi
     3001 qvlsltefpy sekdlsphkq epeswleerk aflntisslk dliakmqvhr eseiyantes
     3061 pegvsdwrge llhaiqqlfv reqnvllaaf qtelaemgtr davmlmnqle hrlqeqatnq
     3121 raamdslqna drrsllmeiq vlhaqmnsrk snpkreqeid sksqemleyn mqqkqlqile
     3181 mqvelrsmkd raaelqeqln sermmgaemk nelaqaklel eatlkaqhkh fkdletirte
     3241 vkekaaeldi lkdtmaneqk ksrelqwale kekakmerse ergreeledl kfsledqkqk
     3301 nlelsklleq ekqlssdlqq riesqealsa aqlsrergrn selqvllese kvraleissa
     3361 lerekelcaq lqsaedkgqa gtrnpseell kelqkqmdek hdrivelvse mekyklesvq
     3421 vrqqmekerq iqrqalqaeq danimvqkkl heleskvedl qwqlgekkqe vhklgnetkk
     3481 lqeiiqdlqk keqedegrke akrtsshkpn ettwdtpndr trnwvlqqkm egaetnelty
     3541 rtltdlsaat eilekvrqkl qnaspklkql awkaasrlqf etaddqdfis vqnaieevis
     3601 elkilpglps leelkmvlpp gtpssslter llrqnaeltg fvsrlseekn nlrnavmkle
     3661 eelrryqhrq psadyssrhl sdvgvnidtl vasekeiwnr erlslqkslk qadaelsklr
     3721 aelrseaflr elgsdtenav lrriygkylr aesfrkaliy qkkylllllg gfqeceeatl
     3781 aliarmggqp sytdleiith hskgftrfrs avrvsiaisr mkflvrrwhr vtgsgnltvn
     3841 rdvfsqntgn elrpdsfsgg mdlygeqrhs srsrlhgmha dlnpvsfacp qlqnydpera
     3901 ltdyihrlea lqkrlgsvqs gstsytqlhm girr
//
LOCUS       XP_041322710            3931 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322710
VERSION     XP_041322710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466776.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3931
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3931
                     /product="A-kinase anchor protein 9 isoform X2"
                     /calculated_mol_wt=453839
     Region          229..>1009
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1328..2262
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          1877..2588
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2629..3477
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <3173..>3486
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          3744..3825
                     /region_name="PACT_coil_coil"
                     /note="Pericentrin-AKAP-450 domain of centrosomal
                     targeting protein; pfam10495"
                     /db_xref="CDD:463115"
     CDS             1..3931
                     /gene="AKAP9"
                     /coded_by="XM_041466776.1:262..12057"
                     /db_xref="GeneID:121353173"
ORIGIN      
        1 medeerlkkl eagkaklaqf rqrkaqtdgq ngskkqkkkk ktasikdees iqdgietdrs
       61 rsdeistcss rrggaatadf aiirtlhsge iikhapayti epeseisttv edyssevngc
      121 sfvtrtaipa dlireeefgv edlhsehgmq hshtqlevme nqlvgkqqei eelsreieem
      181 raaygteglq qlqefeaaik krddiitqlt tnlqqarkek detmreflel teqsqklqiq
      241 fqhlqaseal rnsshsctaa dllqakqqil shqqqleeqe cqlkdyrkkn eefeeqithl
      301 qekimtyemk kegedlsklq ekealveele aklgeeekns fqlkeklsdv sklleelkee
      361 islrnqqisn mkaelttykq kerqcsdeik qlmgtveelq krcykdsqse adivqrmele
      421 tqrrlaqlha eldemhgqqi vqmkqelikq haveierrll qqkveleqts slffnenvnk
      481 dqmhlmniki nelnvklqda dkerekikqe lsqqmeviat ekslqqtrie dllqelnfsr
      541 eqvqrakqti vdmecrlnea ekyrfviedl ktqlasasef rkdlevkhea eitnykikle
      601 mlerekdavl drmaesqeae lerlrtnllf sheeelsrlr edlekehlvn meslkhnlnm
      661 hhkqqldevq nemsqkieam qhekdnlitk qnqlileitn lkdlqqsivn skseemtlqi
      721 helekqievl rqeekekgtl eqeiqelqlk telmqeqmre redtlqkkcs eletqnnvlk
      781 genetleekl knmlvcseen llcnsnvssk teildlqkri enliteneql knqnsilqed
      841 terqksafsl tekkleagyk elqkecasll kakneleesk kkqeaeyksk lkalnekich
      901 lqsnrpvsfk tkpsgfegsk eikvsredis eagevvekda telmeklqtt qrekvelslr
      961 lsdlseqlks kdseichlne kvkslkdeke qilvkckele vtishaqrrn sssndskkkc
     1021 skgkslktat pasesrnkpp gsrsktdggt nsrgnlssgk dcsqevtkrk evqqmlkpeq
     1081 qsvvehvhgt pdrvteeasl paitqsennl qqqvdalkse qtdlqlqmea qriclslvys
     1141 ahvdqvcesl kaekesalct lkeelvhnhm qemtdlkrmh qlelqtlkfq qgddeekstq
     1201 rlieklneav teecsrltqv lcgsqnehss aaveavdreq enfckhdvee klsvelpvhr
     1261 dqaqvpgslc nltvqermda llqkimeeys rlkalqtqlm aefkqvkess lssserrkee
     1321 epihmetrke slqtppqnlm dptiqeycsk eignlkkqle eqhalelehl rsyfqqqlke
     1381 sqerytaelv hlqdklqitg vssdhtsvss dserrlkevf rkvkctenlh qrktdkalel
     1441 grememqndl dvvqllqkqy qerleeevak vivsmsvafa kqtelsgisr qkeeaptqiv
     1501 hperihfgik qqhseeevds llrkatgkgs rnegglkslc selseesget nslgeqlhcn
     1561 sspdcilgqt thksvisegl lshskgltae etphsgevva adtgtdtssq lllyeerled
     1621 mrqelvrqyq ehqqatellr qghmqqmerq kenqdqllae leslkvqlae rvsmendslv
     1681 aerermllee leslkqhsvp gkerlfcelq nnstqtenen enqndareql fehedggrkp
     1741 detpsallsk erhvfqkane klmkillevv kttvameeti gqhvlglldr sgkvqaskqa
     1801 gwdteteesi kpcirvgyek escslyhgss mgdddinmws gaageeglls qhlaesgmei
     1861 dpeneeliln issrlqaave klleainets nqlehakitq telmresfkk qqeatefiry
     1921 qeelqerlne etkareqlal elskaeglid gyadekafle kqlqekvdii dhleqellct
     1981 gnklqeleae qqqvqeekel lsrqkdamra eagpveqrlv daaidaasqa elleeteklm
     2041 kekievqrqa ekeyddlqkq vkvleidlee qvsrfveleq eknaelmdlr qqnqalekql
     2101 ektrkfldeq aidreherdv fqqeiqkleq qlkipqrsqp vnehqtreve qltnhlkekt
     2161 dkcselllsk eqlqrdvqer neeieklecr ireleqalii sadhlqkvee rkqfgtivvk
     2221 gelplevqlq aereavdrke kevtnleeql eqfreelenk neevqqlhmq leiqrkestt
     2281 hlqeleqenk lfkdemevlg laiqksedaa ikdhhlvagr lahimqekdq eiyhlheqia
     2341 klqqqlevpt dnkvieeqne hireleaqve clksdqervk kkndeeveql ndvidklqqe
     2401 laiieqkvpt dvadfqedad spkhileavl aekealekqv eninaeasqt kneleetklk
     2461 msqlkqeisi lkkeharite kykcalvqgg kskpedrsng kteqmegdlc qeidlpdqsq
     2521 lrtsdenarv tisrmeiqlq qlqacikqkd selcrcyhei kdmkeqskae ketlkkrvle
     2581 lertlmekva aalvsqvqln avqeqrrfmq eiqeaskcvd easknaqteg lsdrtenete
     2641 sklslltqrl nemedqlamv nrsleleken vkvaqreatv keerflelqq lleevkekhk
     2701 eeiqkyikqe emqtsqveaq lmesqkekvl iteleqvkee aaaakeelns yrekaeklqq
     2761 eltvkeasli hlqedlckvk enlvqaeekf aiylrknkem vkteskkdae iscdlsaset
     2821 tltgnssssq tdktvevspv lvknaeiqid lqngcsseei aeivreftek idqmqelhaa
     2881 eimdmetrhi sesealkrek fvavqvltee cntlkeviet lqakeripvs glahspphqa
     2941 rdgassdsss dwsqgmylaq tqgsdtiseg idegetstdl lpkkikgllr avhhegiqvl
     3001 sltefpysek dlsphkqepe swleerkafl ntisslkdli akmqvhrese iyantespeg
     3061 vsdwrgellh aiqqlfvreq nvllaafqte laemgtrdav mlmnqlehrl qeqatnqraa
     3121 mdslqnadrr sllmeiqvlh aqmnsrksnp kreqeidsks qemleynmqq kqlqilemqv
     3181 elrsmkdraa elqeqlnser mmgaemknel aqakleleat lkaqhkhfkd letirtevke
     3241 kaaeldilkd tmaneqkksr elqwalekek akmerseerg reeledlkfs ledqkqknle
     3301 lsklleqekq lssdlqqrie sqealsaaql srergrnsel qvllesekvr aleissaler
     3361 ekelcaqlqs aedkgqagtr npseellkel qkqmdekhdr ivelvsemek yklesvqvrq
     3421 qmekerqiqr qalqaeqdan imvqkklhel eskvedlqwq lgekkqevhk lgnetkklqe
     3481 iiqdlqkkeq edegrkeakr tsshkpnett wdtpndrtrn wvlqqkmega etneltyrtl
     3541 tdlsaateil ekvrqklqna spklkqlawk aasrlqfeta ddqdfisvqn aieeviselk
     3601 ilpglpslee lkmvlppgtp ssslterllr qnaeltgfvs rlseeknnlr navmkleeel
     3661 rryqhrqpsa dyssrhlsdv gvnidtlvas ekeiwnrerl slqkslkqad aelsklrael
     3721 rseaflrelg sdtenavlrr iygkylraes frkaliyqkk ylllllggfq eceeatlali
     3781 armggqpsyt dleiithhsk gftrfrsavr vsiaisrmkf lvrrwhrvtg sgnltvnrdv
     3841 fsqntgnelr pdsfsggmdl ygeqrhssrs rlhgmhadln pvsfacpqlq nydperaltd
     3901 yihrlealqk rlgsvqsgst sytqlhmgir r
//
LOCUS       XP_041322711            3921 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 9 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322711
VERSION     XP_041322711.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466777.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3921
                     /product="A-kinase anchor protein 9 isoform X3"
                     /calculated_mol_wt=452941
     Region          160..>378
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <284..783
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          564..>1010
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <1877..>2392
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          2028..>2779
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <3163..>3476
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          3734..3815
                     /region_name="PACT_coil_coil"
                     /note="Pericentrin-AKAP-450 domain of centrosomal
                     targeting protein; pfam10495"
                     /db_xref="CDD:463115"
     CDS             1..3921
                     /gene="AKAP9"
                     /coded_by="XM_041466777.1:262..12027"
                     /db_xref="GeneID:121353173"
ORIGIN      
        1 medeerlkkl eagkaklaqf rqrkaqtdgq ngskkqkkkk ktasikdees iqdgietdrs
       61 rsdeistcss rrggaatadf aiirtlhsge iikhapayti epeseisttv edyssevngc
      121 sfvtrtaipa dlireeefgv edlhsehgmq hshtqlevme nqlvgkqqei eelsreieem
      181 raaygteglq qlqefeaaik krddiitqlt tnlqqarkek detmreflel teqsqklqiq
      241 fqhlqaseal rnsshsctaa dllqakqqil shqqqleeqe cqlkdyrkkn eefeeqithl
      301 qekimtyeme kqkkegedls klqekealve eleaklgeee knsfqlkekl sdvsklleel
      361 keeislrnqq isnmkaeltt ykqkerqcsd eikqlmgtve elqkrcykds qseadivqrm
      421 eletqrrlaq lhaeldemhg qqivqmkqel ikqhaveier rllqqkvele qtsslffnen
      481 vnkdqmhlmn ikinelnvkl qdadkereki kqelsqqmev iatekslqqt riedllqeln
      541 fsreqvqrak qtivdmecrl neaekyrfvi edlktqlasa sefrkdlevk heaeitnyki
      601 klemlerekd avldrmaesq eaelerlrtn llfsheeels rlredlekeh lvnmeslkhn
      661 lnmhhkqqld evqnemsqki eamqhekdnl itkqnqlile itnlkdlqqs ivnskseemt
      721 lqihelekqi evlrqeekek gtleqeiqel qlktelmqeq mreredtlqk kcseletqnn
      781 vlkgenetle eklknmlvcs eenllcnsnv sskteildlq krienliten eqlknqnsil
      841 qedterqksa fsltekklea gykelqkeca sllkaknele eskkkqeaey ksklkalnek
      901 ichlqsnrpv sfktkpsgfe gskeikvsre diseagevve kdatelmekl qttqrekvel
      961 slrlsdlseq lkskdseich lnekvkslkd ekeqilvkck elevtishaq rrnsssndsk
     1021 kkcskgkslk tatpasesrn kppgsrsktd ggtnsrgnls sgkdcsqevt krkevqqmlk
     1081 peqqsvvehv hgtpdrvtee aslpaitqse nnlqqqvdal kseqtdlqlq meaqriclsl
     1141 vysahvdqvc eslkaekesa lctlkeelvh nhmqemtdlk rmhqlelqtl kfqqgddeek
     1201 stqrliekln eavteecsrl tqvlcgsqne hssaaveavd reqenfckhd veeklsvelp
     1261 vhrdqaqvpg slcnltvqer mdallqkime eysrlkalqt qlmaefkqvk esslssserr
     1321 keeepihmet rkeslqtppq nlmdptiqey cskeignlkk qleeqhalel ehlrsyfqqq
     1381 lkesqeryta elvhlqdklq itgvssdhts vssdserrlk evfrkvkcte nlhqrktdka
     1441 lelgrememq ndldvvqllq kqyqerleee vakvivsmsv afakqtelsg isrqkeeapt
     1501 qivhperihf gikqqhseee vdsllrkatg kgsrnegglk slcselsees getnslgeql
     1561 hcnsspdcil gqtthksvis egllshskgl taeetphsge vvaadtgtdt ssqlllyeer
     1621 ledmrqelvr qyqehqqate llrqghmqqm erqkenqdql laeleslkvq laervsmend
     1681 slvaererml leeleslkqh svpgkerlfc elqnnstqte nenenqndar eqlfehedgg
     1741 rkpdetpsal lskerhvfqk aneklmkill evvkttvame etigqhvlgl ldrsgkvqas
     1801 kqagwdtete esikpcirvg yekescslyh gssmgdddin mwsgaageeg llsqhlaesg
     1861 meidpeneel ilnissrlqa aveklleain etsnqlehak itqtelmres fkkqqeatef
     1921 iryqeelqer lneetkareq lalelskaeg lidgyadeka flekqlqekv diidhleqel
     1981 lctgnklqel eaeqqqvqee kellsrqkda mraeagpveq qlleeteklm kekievqrqa
     2041 ekeyddlqkq vkvleidlee qvsrfveleq eknaelmdlr qqnqalekql ektrkfldeq
     2101 aidreherdv fqqeiqkleq qlkipqrsqp vnehqtreve qltnhlkekt dkcselllsk
     2161 eqlqrdvqer neeieklecr ireleqalii sadhlqkvee rkqfgtivvk gelplevqlq
     2221 aereavdrke kevtnleeql eqfreelenk neevqqlhmq leiqrkestt hlqeleqenk
     2281 lfkdemevlg laiqksedaa ikdhhlvagr lahimqekdq eiyhlheqia klqqqlevpt
     2341 dnkvieeqne hireleaqve clksdqervk kkndeeveql ndvidklqqe laiieqkvpt
     2401 dvadfqedad spkhileavl aekealekqv eninaeasqt kneleetklk msqlkqeisi
     2461 lkkeharite kykcalvqgg kskpedrsng kteqmegdlc qeidlpdqsq lrtsdenarv
     2521 tisrmeiqlq qlqacikqkd selcrcyhei kdmkeqskae ketlkkrvle lertlmekva
     2581 aalvsqvqln avqeqrrfmq eiqeaskcvd easknaqteg lsdrtenete sklslltqrl
     2641 nemedqlamv nrsleleken vkvaqreatv keerflelqq lleevkekhk eeiqkyikqe
     2701 emqtsqveaq lmesqkekvl iteleqvkee aaaakeelns yrekaeklqq eltvkeasli
     2761 hlqedlckvk enlvqaeekf aiylrknkem vkteskkdae iscdlsaset tltgnssssq
     2821 tdktvevspv lvknaeiqid lqngcsseei aeivreftek idqmqelhaa eimdmetrhi
     2881 sesealkrek fvavqvltee cntlkeviet lqakeripvs glahspphqa rdgassdsss
     2941 dwsqgmylaq tqgsdtiseg idegetstdl lpkkikgllr avhhegiqvl sltefpysek
     3001 dlsphkqepe swleerkafl ntisslkdli akmqvhrese iyantespeg vsdwrgellh
     3061 aiqqlfvreq nvllaafqte laemgtrdav mlmnqlehrl qeqatnqraa mdslqnadrr
     3121 sllmeiqvlh aqmnsrksnp kreqeidsks qemleynmqq kqlqilemqv elrsmkdraa
     3181 elqeqlnser mmgaemknel aqakleleat lkaqhkhfkd letirtevke kaaeldilkd
     3241 tmaneqkksr elqwalekek akmerseerg reeledlkfs ledqkqknle lsklleqekq
     3301 lssdlqqrie sqealsaaql srergrnsel qvllesekvr aleissaler ekelcaqlqs
     3361 aedkgqagtr npseellkel qkqmdekhdr ivelvsemek yklesvqvrq qmekerqiqr
     3421 qalqaeqdan imvqkklhel eskvedlqwq lgekkqevhk lgnetkklqe iiqdlqkkeq
     3481 edegrkeakr tsshkpnett wdtpndrtrn wvlqqkmega etneltyrtl tdlsaateil
     3541 ekvrqklqna spklkqlawk aasrlqfeta ddqdfisvqn aieeviselk ilpglpslee
     3601 lkmvlppgtp ssslterllr qnaeltgfvs rlseeknnlr navmkleeel rryqhrqpsa
     3661 dyssrhlsdv gvnidtlvas ekeiwnrerl slqkslkqad aelsklrael rseaflrelg
     3721 sdtenavlrr iygkylraes frkaliyqkk ylllllggfq eceeatlali armggqpsyt
     3781 dleiithhsk gftrfrsavr vsiaisrmkf lvrrwhrvtg sgnltvnrdv fsqntgnelr
     3841 pdsfsggmdl ygeqrhssrs rlhgmhadln pvsfacpqlq nydperaltd yihrlealqk
     3901 rlgsvqsgst sytqlhmgir r
//
LOCUS       XP_041322712            3859 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 9 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322712
VERSION     XP_041322712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3859
                     /product="A-kinase anchor protein 9 isoform X4"
                     /calculated_mol_wt=445702
     Region          209..>937
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1805..2516
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2557..3405
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <3101..>3414
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          3672..3753
                     /region_name="PACT_coil_coil"
                     /note="Pericentrin-AKAP-450 domain of centrosomal
                     targeting protein; pfam10495"
                     /db_xref="CDD:463115"
     CDS             1..3859
                     /gene="AKAP9"
                     /coded_by="XM_041466778.1:262..11841"
                     /db_xref="GeneID:121353173"
ORIGIN      
        1 medeerlkkl eagkaklaqf rqrkaqtdgq ngskkqkkkk ktasikdees iqdgietdrs
       61 rsdeistcss rrggaatadf aiirtlhsge iikhapayti epeseisttv edysselqef
      121 eaaikkrddi itqlttnlqq arkekdetmr eflelteqsq klqiqfqhlq asealrnssh
      181 sctaadllqa kqqilshqqq leeqecqlkd yrkkneefee qithlqekim tyemekqkke
      241 gedlsklqek ealveeleak lgeeeknsfq lkeklsdvsk lleelkeeis lrnqqisnmk
      301 aelttykqke rqcsdeikql mgtveelqkr cykdsqsead ivqrmeletq rrlaqlhael
      361 demhgqqivq mkqelikqha veierrllqq kveleqtssl ffnenvnkdq mhlmnikine
      421 lnvklqdadk erekikqels qqmeviatek slqqtriedl lqelnfsreq vqrakqtivd
      481 mecrlneaek yrfviedlkt qlasasefrk dlevkheaei tnykikleml erekdavldr
      541 maesqeaele rlrtnllfsh eeelsrlred lekehlvnme slkhnlnmhh kqqldevqne
      601 msqkieamqh ekdnlitkqn qlileitnlk dlqqsivnsk seemtlqihe lekqievlrq
      661 eekekgtleq eiqelqlkte lmqeqmrere dtlqkkcsel etqnnvlkge netleeklkn
      721 mlvcseenll cnsnvsskte ildlqkrien liteneqlkn qnsilqedte rqksafslte
      781 kkleagykel qkecasllka kneleeskkk qeaeyksklk alnekichlq snrpvsfktk
      841 psgfegskei kvsredisea gevvekdate lmeklqttqr ekvelslrls dlseqlkskd
      901 seichlnekv kslkdekeqi lvkckelevt ishaqrrnss sndskkkcsk gkslktatpa
      961 sesrnkppgs rsktdggtns rgnlssgkdc sqevtkrkev qqmlkpeqqs vvehvhgtpd
     1021 rvteeaslpa itqsennlqq qvdalkseqt dlqlqmeaqr iclslvysah vdqvceslka
     1081 ekesalctlk eelvhnhmqe mtdlkrmhql elqtlkfqqg ddeekstqrl ieklneavte
     1141 ecsrltqvlc gsqnehssaa veavdreqen fckhdveekl svelpvhrdq aqvpgslcnl
     1201 tvqermdall qkimeeysrl kalqtqlmae fkqvkessls sserrkeeep ihmetrkesl
     1261 qtppqnlmdp tiqeycskei gnlkkqleeq halelehlrs yfqqqlkesq erytaelvhl
     1321 qdklqitgvs sdhtsvssds errlkevfrk vkctenlhqr ktdkalelgr ememqndldv
     1381 vqllqkqyqe rleeevakvi vsmsvafakq telsgisrqk eeaptqivhp erihfgikqq
     1441 hseeevdsll rkatgkgsrn egglkslcse lseesgetns lgeqlhcnss pdcilgqtth
     1501 ksviseglls hskgltaeet phsgevvaad tgtdtssqll lyeerledmr qelvrqyqeh
     1561 qqatellrqg hmqqmerqke nqdqllaele slkvqlaerv smendslvae rermlleele
     1621 slkqhsvpgk erlfcelqnn stqtenenen qndareqlfe hedggrkpde tpsallsker
     1681 hvfqkanekl mkillevvkt tvameetigq hvlglldrsg kvqaskqagw dteteesikp
     1741 cirvgyekes cslyhgssmg dddinmwsga ageegllsqh laesgmeidp eneelilnis
     1801 srlqaavekl leainetsnq lehakitqte lmresfkkqq eatefiryqe elqerlneet
     1861 kareqlalel skaeglidgy adekaflekq lqekvdiidh leqellctgn klqeleaeqq
     1921 qvqeekells rqkdamraea gpveqrlvda aidaasqael leeteklmke kievqrqaek
     1981 eyddlqkqvk vleidleeqv srfveleqek naelmdlrqq nqalekqlek trkfldeqai
     2041 dreherdvfq qeiqkleqql kipqrsqpvn ehqtreveql tnhlkektdk cselllskeq
     2101 lqrdvqerne eieklecrir eleqaliisa dhlqkveerk qfgtivvkge lplevqlqae
     2161 reavdrkeke vtnleeqleq freelenkne evqqlhmqle iqrkestthl qeleqenklf
     2221 kdemevlgla iqksedaaik dhhlvagrla himqekdqei yhlheqiakl qqqlevptdn
     2281 kvieeqnehi releaqvecl ksdqervkkk ndeeveqlnd vidklqqela iieqkvptdv
     2341 adfqedadsp khileavlae kealekqven inaeasqtkn eleetklkms qlkqeisilk
     2401 kehariteky kcalvqggks kpedrsngkt eqmegdlcqe idlpdqsqlr tsdenarvti
     2461 srmeiqlqql qacikqkdse lcrcyheikd mkeqskaeke tlkkrvlele rtlmekvaaa
     2521 lvsqvqlnav qeqrrfmqei qeaskcvdea sknaqtegls drtenetesk lslltqrlne
     2581 medqlamvnr slelekenvk vaqreatvke erflelqqll eevkekhkee iqkyikqeem
     2641 qtsqveaqlm esqkekvlit eleqvkeeaa aakeelnsyr ekaeklqqel tvkeaslihl
     2701 qedlckvken lvqaeekfai ylrknkemvk teskkdaeis cdlsasettl tgnssssqtd
     2761 ktvevspvlv knaeiqidlq ngcsseeiae ivreftekid qmqelhaaei mdmetrhise
     2821 sealkrekfv avqvlteecn tlkevietlq akeripvsgl ahspphqard gassdsssdw
     2881 sqgmylaqtq gsdtisegid egetstdllp kkikgllrav hhegiqvlsl tefpysekdl
     2941 sphkqepesw leerkaflnt isslkdliak mqvhreseiy antespegvs dwrgellhai
     3001 qqlfvreqnv llaafqtela emgtrdavml mnqlehrlqe qatnqraamd slqnadrrsl
     3061 lmeiqvlhaq mnsrksnpkr eqeidsksqe mleynmqqkq lqilemqvel rsmkdraael
     3121 qeqlnsermm gaemknelaq akleleatlk aqhkhfkdle tirtevkeka aeldilkdtm
     3181 aneqkksrel qwalekekak merseergre eledlkfsle dqkqknlels klleqekqls
     3241 sdlqqriesq ealsaaqlsr ergrnselqv llesekvral eissalerek elcaqlqsae
     3301 dkgqagtrnp seellkelqk qmdekhdriv elvsemekyk lesvqvrqqm ekerqiqrqa
     3361 lqaeqdanim vqkklheles kvedlqwqlg ekkqevhklg netkklqeii qdlqkkeqed
     3421 egrkeakrts shkpnettwd tpndrtrnwv lqqkmegaet neltyrtltd lsaateilek
     3481 vrqklqnasp klkqlawkaa srlqfetadd qdfisvqnai eeviselkil pglpsleelk
     3541 mvlppgtpss slterllrqn aeltgfvsrl seeknnlrna vmkleeelrr yqhrqpsady
     3601 ssrhlsdvgv nidtlvasek eiwnrerlsl qkslkqadae lsklraelrs eaflrelgsd
     3661 tenavlrriy gkylraesfr kaliyqkkyl llllggfqec eeatlaliar mggqpsytdl
     3721 eiithhskgf trfrsavrvs iaisrmkflv rrwhrvtgsg nltvnrdvfs qntgnelrpd
     3781 sfsggmdlyg eqrhssrsrl hgmhadlnpv sfacpqlqny dperaltdyi hrlealqkrl
     3841 gsvqsgstsy tqlhmgirr
//
LOCUS       XP_041322713            3811 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 9 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322713
VERSION     XP_041322713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466779.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3811
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3811
                     /product="A-kinase anchor protein 9 isoform X5"
                     /calculated_mol_wt=440989
     Region          160..>378
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          <284..783
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          564..>1010
                     /region_name="CCDC158"
                     /note="Coiled-coil domain-containing protein 158;
                     pfam15921"
                     /db_xref="CDD:464943"
     Region          <1430..2011
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1757..2468
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2509..3357
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <3053..>3366
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          3624..3705
                     /region_name="PACT_coil_coil"
                     /note="Pericentrin-AKAP-450 domain of centrosomal
                     targeting protein; pfam10495"
                     /db_xref="CDD:463115"
     CDS             1..3811
                     /gene="AKAP9"
                     /coded_by="XM_041466779.1:262..11697"
                     /db_xref="GeneID:121353173"
ORIGIN      
        1 medeerlkkl eagkaklaqf rqrkaqtdgq ngskkqkkkk ktasikdees iqdgietdrs
       61 rsdeistcss rrggaatadf aiirtlhsge iikhapayti epeseisttv edyssevngc
      121 sfvtrtaipa dlireeefgv edlhsehgmq hshtqlevme nqlvgkqqei eelsreieem
      181 raaygteglq qlqefeaaik krddiitqlt tnlqqarkek detmreflel teqsqklqiq
      241 fqhlqaseal rnsshsctaa dllqakqqil shqqqleeqe cqlkdyrkkn eefeeqithl
      301 qekimtyeme kqkkegedls klqekealve eleaklgeee knsfqlkekl sdvsklleel
      361 keeislrnqq isnmkaeltt ykqkerqcsd eikqlmgtve elqkrcykds qseadivqrm
      421 eletqrrlaq lhaeldemhg qqivqmkqel ikqhaveier rllqqkvele qtsslffnen
      481 vnkdqmhlmn ikinelnvkl qdadkereki kqelsqqmev iatekslqqt riedllqeln
      541 fsreqvqrak qtivdmecrl neaekyrfvi edlktqlasa sefrkdlevk heaeitnyki
      601 klemlerekd avldrmaesq eaelerlrtn llfsheeels rlredlekeh lvnmeslkhn
      661 lnmhhkqqld evqnemsqki eamqhekdnl itkqnqlile itnlkdlqqs ivnskseemt
      721 lqihelekqi evlrqeekek gtleqeiqel qlktelmqeq mreredtlqk kcseletqnn
      781 vlkgenetle eklknmlvcs eenllcnsnv sskteildlq krienliten eqlknqnsil
      841 qedterqksa fsltekklea gykelqkeca sllkaknele eskkkqeaey ksklkalnek
      901 ichlqsnrpv sfktkpsgfe gskeikvsre diseagevve kdatelmekl qttqrekvel
      961 slrlsdlseq lkskdseich lnekvkslkd ekeqilvkck elevtishaq rrnsssndsk
     1021 kkcskgkslk tatpasesrn kppgsrsktd ggtnsrgnls sgkdcsqevt krkevqqmlk
     1081 peqqsvvehv hgtpdrvtee aslpaitqse nnlqqqvdal kseqtdlqlq meaqriclsl
     1141 vysahvdqvc eslkaekesa lctlkeelvh nhmqemtdlk rmhqlelqtl kfqqgddeek
     1201 stqrliekln eavteecsrl tqvlcgsqne hssaaveavd reqenfckhd veeklsvelp
     1261 vhrdqaqvpg slcnltvqer mdallqkime eysrlkalqt qlmaefkqvk esslssserr
     1321 keeepihmet rkeslqtppq nlmdptiqey cskeignlkk qleeqhalel ehlrsyfqqq
     1381 lkesqeryta elvhlqdklq itgvssdhts vssdserrlk evfrkvkcte nlhqrktdka
     1441 lelgrememq ndldvvqllq kqyqerleee vakhsgevva adtgtdtssq lllyeerled
     1501 mrqelvrqyq ehqqatellr qghmqqmerq kenqdqllae leslkvqlae rvsmendslv
     1561 aerermllee leslkqhsvp gkerlfcelq nnstqtenen enqndareql fehedggrkp
     1621 detpsallsk erhvfqkane klmkillevv kttvameeti gqhvlglldr sgkvqaskqa
     1681 gwdteteesi kpcirvgyek escslyhgss mgdddinmws gaageeglls qhlaesgmei
     1741 dpeneeliln issrlqaave klleainets nqlehakitq telmresfkk qqeatefiry
     1801 qeelqerlne etkareqlal elskaeglid gyadekafle kqlqekvdii dhleqellct
     1861 gnklqeleae qqqvqeekel lsrqkdamra eagpveqrlv daaidaasqa elleeteklm
     1921 kekievqrqa ekeyddlqkq vkvleidlee qvsrfveleq eknaelmdlr qqnqalekql
     1981 ektrkfldeq aidreherdv fqqeiqkleq qlkipqrsqp vnehqtreve qltnhlkekt
     2041 dkcselllsk eqlqrdvqer neeieklecr ireleqalii sadhlqkvee rkqfgtivvk
     2101 gelplevqlq aereavdrke kevtnleeql eqfreelenk neevqqlhmq leiqrkestt
     2161 hlqeleqenk lfkdemevlg laiqksedaa ikdhhlvagr lahimqekdq eiyhlheqia
     2221 klqqqlevpt dnkvieeqne hireleaqve clksdqervk kkndeeveql ndvidklqqe
     2281 laiieqkvpt dvadfqedad spkhileavl aekealekqv eninaeasqt kneleetklk
     2341 msqlkqeisi lkkeharite kykcalvqgg kskpedrsng kteqmegdlc qeidlpdqsq
     2401 lrtsdenarv tisrmeiqlq qlqacikqkd selcrcyhei kdmkeqskae ketlkkrvle
     2461 lertlmekva aalvsqvqln avqeqrrfmq eiqeaskcvd easknaqteg lsdrtenete
     2521 sklslltqrl nemedqlamv nrsleleken vkvaqreatv keerflelqq lleevkekhk
     2581 eeiqkyikqe emqtsqveaq lmesqkekvl iteleqvkee aaaakeelns yrekaeklqq
     2641 eltvkeasli hlqedlckvk enlvqaeekf aiylrknkem vkteskkdae iscdlsaset
     2701 tltgnssssq tdktvevspv lvknaeiqid lqngcsseei aeivreftek idqmqelhaa
     2761 eimdmetrhi sesealkrek fvavqvltee cntlkeviet lqakeripvs glahspphqa
     2821 rdgassdsss dwsqgmylaq tqgsdtiseg idegetstdl lpkkikgllr avhhegiqvl
     2881 sltefpysek dlsphkqepe swleerkafl ntisslkdli akmqvhrese iyantespeg
     2941 vsdwrgellh aiqqlfvreq nvllaafqte laemgtrdav mlmnqlehrl qeqatnqraa
     3001 mdslqnadrr sllmeiqvlh aqmnsrksnp kreqeidsks qemleynmqq kqlqilemqv
     3061 elrsmkdraa elqeqlnser mmgaemknel aqakleleat lkaqhkhfkd letirtevke
     3121 kaaeldilkd tmaneqkksr elqwalekek akmerseerg reeledlkfs ledqkqknle
     3181 lsklleqekq lssdlqqrie sqealsaaql srergrnsel qvllesekvr aleissaler
     3241 ekelcaqlqs aedkgqagtr npseellkel qkqmdekhdr ivelvsemek yklesvqvrq
     3301 qmekerqiqr qalqaeqdan imvqkklhel eskvedlqwq lgekkqevhk lgnetkklqe
     3361 iiqdlqkkeq edegrkeakr tsshkpnett wdtpndrtrn wvlqqkmega etneltyrtl
     3421 tdlsaateil ekvrqklqna spklkqlawk aasrlqfeta ddqdfisvqn aieeviselk
     3481 ilpglpslee lkmvlppgtp ssslterllr qnaeltgfvs rlseeknnlr navmkleeel
     3541 rryqhrqpsa dyssrhlsdv gvnidtlvas ekeiwnrerl slqkslkqad aelsklrael
     3601 rseaflrelg sdtenavlrr iygkylraes frkaliyqkk ylllllggfq eceeatlali
     3661 armggqpsyt dleiithhsk gftrfrsavr vsiaisrmkf lvrrwhrvtg sgnltvnrdv
     3721 fsqntgnelr pdsfsggmdl ygeqrhssrs rlhgmhadln pvsfacpqlq nydperaltd
     3781 yihrlealqk rlgsvqsgst sytqlhmgir r
//
LOCUS       XP_041322714            3786 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 9 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322714
VERSION     XP_041322714.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466780.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3786
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3786
                     /product="A-kinase anchor protein 9 isoform X6"
                     /calculated_mol_wt=437829
     Region          12..>230
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     Region          143..>864
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1732..2443
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2484..3332
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          <3028..>3341
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          3599..3680
                     /region_name="PACT_coil_coil"
                     /note="Pericentrin-AKAP-450 domain of centrosomal
                     targeting protein; pfam10495"
                     /db_xref="CDD:463115"
     CDS             1..3786
                     /gene="AKAP9"
                     /coded_by="XM_041466780.1:274..11634"
                     /db_xref="GeneID:121353173"
ORIGIN      
        1 mqhshtqlev menqlvgkqq eieelsreie emraaygteg lqqlqefeaa ikkrddiitq
       61 lttnlqqark ekdetmrefl elteqsqklq iqfqhlqase alrnsshsct aadllqakqq
      121 ilshqqqlee qecqlkdyrk kneefeeqit hlqekimtye mekqkkeged lsklqekeal
      181 veeleaklge eeknsfqlke klsdvsklle elkeeislrn qqisnmkael ttykqkerqc
      241 sdeikqlmgt veelqkrcyk dsqseadivq rmeletqrrl aqlhaeldem hgqqivqmkq
      301 elikqhavei errllqqkve leqtsslffn envnkdqmhl mnikinelnv klqdadkere
      361 kikqelsqqm eviatekslq qtriedllqe lnfsreqvqr akqtivdmec rlneaekyrf
      421 viedlktqla sasefrkdle vkheaeitny kiklemlere kdavldrmae sqeaelerlr
      481 tnllfsheee lsrlredlek ehlvnmeslk hnlnmhhkqq ldevqnemsq kieamqhekd
      541 nlitkqnqli leitnlkdlq qsivnsksee mtlqihelek qievlrqeek ekgtleqeiq
      601 elqlktelmq eqmreredtl qkkcseletq nnvlkgenet leeklknmlv cseenllcns
      661 nvsskteild lqkrienlit eneqlknqns ilqedterqk safsltekkl eagykelqke
      721 casllkakne leeskkkqea eyksklkaln ekichlqsnr pvsfktkpsg fegskeikvs
      781 rediseagev vekdatelme klqttqrekv elslrlsdls eqlkskdsei chlnekvksl
      841 kdekeqilvk ckelevtish aqrrnsssnd skkkcskgks lktatpases rnkppgsrsk
      901 tdggtnsrgn lssgkdcsqe vtkrkevqqm lkpeqqsvve hvhgtpdrvt eeaslpaitq
      961 sennlqqqvd alkseqtdlq lqmeaqricl slvysahvdq vceslkaeke salctlkeel
     1021 vhnhmqemtd lkrmhqlelq tlkfqqgdde ekstqrliek lneavteecs rltqvlcgsq
     1081 nehssaavea vdreqenfck hdveeklsve lpvhrdqaqv pgslcnltvq ermdallqki
     1141 meeysrlkal qtqlmaefkq vkesslssse rrkeeepihm etrkeslqtp pqnlmdptiq
     1201 eycskeignl kkqleeqhal elehlrsyfq qqlkesqery taelvhlqdk lqitgvssdh
     1261 tsvssdserr lkevfrkvkc tenlhqrktd kalelgreme mqndldvvql lqkqyqerle
     1321 eevakvivsm svafakqtel sgisrqkeea ptqivhperi hfgikqqhse eevdsllrka
     1381 tgkgsrnegg lkslcselse esgetnslge qlhcnsspdc ilgqtthksv isegllshsk
     1441 gltaeetphs gevvaadtgt dtssqlllye erledmrqel vrqyqehqqa tellrqghmq
     1501 qmerqkenqd qllaeleslk vqlaervsme ndslvaerer mlleeleslk qhsvpgkerl
     1561 fcelqnnstq tenenenqnd areqlfehed ggrkpdetps allskerhvf qkaneklmki
     1621 llevvkttva meetigqhvl glldrsgkvq askqagwdte teesikpcir vgyekescsl
     1681 yhgssmgddd inmwsgaage egllsqhlae sgmeidpene elilnissrl qaavekllea
     1741 inetsnqleh akitqtelmr esfkkqqeat efiryqeelq erlneetkar eqlalelska
     1801 eglidgyade kaflekqlqe kvdiidhleq ellctgnklq eleaeqqqvq eekellsrqk
     1861 damraeagpv eqrlvdaaid aasqaellee teklmkekie vqrqaekeyd dlqkqvkvle
     1921 idleeqvsrf veleqeknae lmdlrqqnqa lekqlektrk fldeqaidre herdvfqqei
     1981 qkleqqlkip qrsqpvnehq treveqltnh lkektdkcse lllskeqlqr dvqerneeie
     2041 klecrirele qaliisadhl qkveerkqfg tivvkgelpl evqlqaerea vdrkekevtn
     2101 leeqleqfre elenkneevq qlhmqleiqr kestthlqel eqenklfkde mevlglaiqk
     2161 sedaaikdhh lvagrlahim qekdqeiyhl heqiaklqqq levptdnkvi eeqnehirel
     2221 eaqveclksd qervkkknde eveqlndvid klqqelaiie qkvptdvadf qedadspkhi
     2281 leavlaekea lekqvenina easqtknele etklkmsqlk qeisilkkeh aritekykca
     2341 lvqggkskpe drsngkteqm egdlcqeidl pdqsqlrtsd enarvtisrm eiqlqqlqac
     2401 ikqkdselcr cyheikdmke qskaeketlk krvlelertl mekvaaalvs qvqlnavqeq
     2461 rrfmqeiqea skcvdeaskn aqteglsdrt enetesklsl ltqrlnemed qlamvnrsle
     2521 lekenvkvaq reatvkeerf lelqqlleev kekhkeeiqk yikqeemqts qveaqlmesq
     2581 kekvlitele qvkeeaaaak eelnsyreka eklqqeltvk easlihlqed lckvkenlvq
     2641 aeekfaiylr knkemvktes kkdaeiscdl sasettltgn ssssqtdktv evspvlvkna
     2701 eiqidlqngc sseeiaeivr eftekidqmq elhaaeimdm etrhisesea lkrekfvavq
     2761 vlteecntlk evietlqake ripvsglahs pphqardgas sdsssdwsqg mylaqtqgsd
     2821 tisegidege tstdllpkki kgllravhhe giqvlsltef pysekdlsph kqepeswlee
     2881 rkaflntiss lkdliakmqv hreseiyant espegvsdwr gellhaiqql fvreqnvlla
     2941 afqtelaemg trdavmlmnq lehrlqeqat nqraamdslq nadrrsllme iqvlhaqmns
     3001 rksnpkreqe idsksqemle ynmqqkqlqi lemqvelrsm kdraaelqeq lnsermmgae
     3061 mknelaqakl eleatlkaqh khfkdletir tevkekaael dilkdtmane qkksrelqwa
     3121 lekekakmer seergreele dlkfsledqk qknlelskll eqekqlssdl qqriesqeal
     3181 saaqlsrerg rnselqvlle sekvraleis salerekelc aqlqsaedkg qagtrnpsee
     3241 llkelqkqmd ekhdrivelv semekykles vqvrqqmeke rqiqrqalqa eqdanimvqk
     3301 klheleskve dlqwqlgekk qevhklgnet kklqeiiqdl qkkeqedegr keakrtsshk
     3361 pnettwdtpn drtrnwvlqq kmegaetnel tyrtltdlsa ateilekvrq klqnaspklk
     3421 qlawkaasrl qfetaddqdf isvqnaieev iselkilpgl psleelkmvl ppgtpssslt
     3481 erllrqnael tgfvsrlsee knnlrnavmk leeelrryqh rqpsadyssr hlsdvgvnid
     3541 tlvasekeiw nrerlslqks lkqadaelsk lraelrseaf lrelgsdten avlrriygky
     3601 lraesfrkal iyqkkyllll lggfqeceea tlaliarmgg qpsytdleii thhskgftrf
     3661 rsavrvsiai srmkflvrrw hrvtgsgnlt vnrdvfsqnt gnelrpdsfs ggmdlygeqr
     3721 hssrsrlhgm hadlnpvsfa cpqlqnydpe raltdyihrl ealqkrlgsv qsgstsytql
     3781 hmgirr
//
LOCUS       XP_041322715             503 aa            linear   VRT 06-MAY-2021
DEFINITION  lanosterol 14-alpha demethylase [Pyrgilauda ruficollis].
ACCESSION   XP_041322715
VERSION     XP_041322715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="lanosterol 14-alpha demethylase"
                     /calculated_mol_wt=56818
     Region          88..499
                     /region_name="CYP51-like"
                     /note="cytochrome P450 family 51 and similar cytochrome
                     P450s; cd11042"
                     /db_xref="CDD:410668"
     Site            order(131,153,156,163,308,311..312,315..316,319,371,376,
                     380,382,441..443,446..451,454..455)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410668"
     Site            order(131,133..134,138,234,307,310..311,314..315,379,381)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410668"
     CDS             1..503
                     /gene="LOC121353175"
                     /coded_by="XM_041466781.1:75..1586"
                     /db_xref="GeneID:121353175"
ORIGIN      
        1 maagaekmln lmeaggslle rvavgnplsl vlaasafals lgylfqlgyr rhlgseqkny
       61 ppfipsgipf lghaiafgks pieflenayd kygpvfsftm vgktftyllg sdaaallfns
      121 knedlnaedv ysrlttpvfg kgvaydipna vfleqkkmlk tglniaqfrq hvsvieeetk
      181 eyfkawgecg eknlfealse liiltashcl hgkeirglld ekvaqlyadl dggfthtawl
      241 lpgwlplpsf rrrdrahrei knifykviqk rrkseekedd mlqtlldasy kdgraltdde
      301 iagmligllm agqhtsstts awlgfflard kalqeqcyae qkavcgedlp pltydqlkdl
      361 slldrclket frlrppimti mrmartpqtv agyniprghq vcvsptvnqr lrdswtdald
      421 fkpdrylqdn paagekfiyi pfgagrhrci genfayvqik tiwstllrly efdlvndyfp
      481 tinyttmiht pnnpvirykr rsl
//
LOCUS       XP_041322716             395 aa            linear   VRT 06-MAY-2021
DEFINITION  cartilage-associated protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322716
VERSION     XP_041322716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="cartilage-associated protein"
                     /calculated_mol_wt=45829
     Region          <128..>187
                     /region_name="OM_YfiO"
                     /note="outer membrane assembly lipoprotein YfiO;
                     TIGR03302"
                     /db_xref="CDD:274513"
     CDS             1..395
                     /gene="LOC121353176"
                     /coded_by="XM_041466782.1:70..1257"
                     /db_xref="GeneID:121353176"
ORIGIN      
        1 mwlaalaall aaagaqyery sfrsfprdel mplesayryg ldqystenwp esvsylevsm
       61 rlyrllrdse afchrncsaa gqpppapaap asaaleelrl lsgvlrraqc lrrckqglpa
      121 frqaqpgrel leefqrrepy kylqfayfka nnipkaiaaa htfllkhpdd emmqrnmayy
      181 ksipdaeehi kdleikpyen lfvravrayn gdnwrtsisd melalpdffk ayddciaace
      241 gsreitdfkd fylsiadhyi evlackvqce snltpiiggf vvekfvatmy hylqfayykl
      301 ndmknaasca asyllfdekd evmkqnmvyy qyhkdkwglk eedfqprsea vryhnittlq
      361 lemyefakeh lmdddegevv efldelleve eknes
//
LOCUS       XP_041322718             501 aa            linear   VRT 06-MAY-2021
DEFINITION  gasdermin-E [Pyrgilauda ruficollis].
ACCESSION   XP_041322718
VERSION     XP_041322718.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466784.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="gasdermin-E"
                     /calculated_mol_wt=55987
     Region          1..245
                     /region_name="Gasdermin"
                     /note="Gasdermin pore forming domain; pfam04598"
                     /db_xref="CDD:398339"
     Region          287..474
                     /region_name="Gasdermin_C"
                     /note="Gasdermin PUB domain; pfam17708"
                     /db_xref="CDD:407590"
     CDS             1..501
                     /gene="GSDME"
                     /coded_by="XM_041466784.1:403..1908"
                     /db_xref="GeneID:121353177"
ORIGIN      
        1 mfakatknfv retdsggdli pvshlnasdk lqllslvtkr rkfwcwqkpk yhfltvtlsd
       61 vltedkpikp vivesdfaky mgkfedfvqg sietsfvkfs lgaggkgyve nqssfgnlrk
      121 qevdlqqlmk dvkdrtidln ssllqqvier krevlcilre kiittqrcti sehiqteekv
      181 sgvmgctakt ikvsvsengs lmkdssvile ippattiayg vielfikhng qfefclldeq
      241 qggfekeste gsayphsvqf rdasflyqpd avdnemysgt knlvpsdasi silkqglswl
      301 ktqfqpfmkl aedkqralyk tlcelllhee mvtalgdmfd dictgdkpdl eelkpeqqrd
      361 lldflqllgc slkselllqk yqpqdeelfs aahllisais elpddtlvll raccdlhvvp
      421 alcflpnvas adgtvalssp lvatltdrgr fevvqrlfas sninlemtes svkavtmkep
      481 rffplvlyva lygfhalggn v
//
LOCUS       XP_041322719             501 aa            linear   VRT 06-MAY-2021
DEFINITION  gasdermin-E [Pyrgilauda ruficollis].
ACCESSION   XP_041322719
VERSION     XP_041322719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="gasdermin-E"
                     /calculated_mol_wt=55987
     Region          1..245
                     /region_name="Gasdermin"
                     /note="Gasdermin pore forming domain; pfam04598"
                     /db_xref="CDD:398339"
     Region          287..474
                     /region_name="Gasdermin_C"
                     /note="Gasdermin PUB domain; pfam17708"
                     /db_xref="CDD:407590"
     CDS             1..501
                     /gene="GSDME"
                     /coded_by="XM_041466785.1:302..1807"
                     /db_xref="GeneID:121353177"
ORIGIN      
        1 mfakatknfv retdsggdli pvshlnasdk lqllslvtkr rkfwcwqkpk yhfltvtlsd
       61 vltedkpikp vivesdfaky mgkfedfvqg sietsfvkfs lgaggkgyve nqssfgnlrk
      121 qevdlqqlmk dvkdrtidln ssllqqvier krevlcilre kiittqrcti sehiqteekv
      181 sgvmgctakt ikvsvsengs lmkdssvile ippattiayg vielfikhng qfefclldeq
      241 qggfekeste gsayphsvqf rdasflyqpd avdnemysgt knlvpsdasi silkqglswl
      301 ktqfqpfmkl aedkqralyk tlcelllhee mvtalgdmfd dictgdkpdl eelkpeqqrd
      361 lldflqllgc slkselllqk yqpqdeelfs aahllisais elpddtlvll raccdlhvvp
      421 alcflpnvas adgtvalssp lvatltdrgr fevvqrlfas sninlemtes svkavtmkep
      481 rffplvlyva lygfhalggn v
//
LOCUS       XP_041322720             501 aa            linear   VRT 06-MAY-2021
DEFINITION  gasdermin-E [Pyrgilauda ruficollis].
ACCESSION   XP_041322720
VERSION     XP_041322720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466786.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="gasdermin-E"
                     /calculated_mol_wt=55987
     Region          1..245
                     /region_name="Gasdermin"
                     /note="Gasdermin pore forming domain; pfam04598"
                     /db_xref="CDD:398339"
     Region          287..474
                     /region_name="Gasdermin_C"
                     /note="Gasdermin PUB domain; pfam17708"
                     /db_xref="CDD:407590"
     CDS             1..501
                     /gene="GSDME"
                     /coded_by="XM_041466786.1:190..1695"
                     /db_xref="GeneID:121353177"
ORIGIN      
        1 mfakatknfv retdsggdli pvshlnasdk lqllslvtkr rkfwcwqkpk yhfltvtlsd
       61 vltedkpikp vivesdfaky mgkfedfvqg sietsfvkfs lgaggkgyve nqssfgnlrk
      121 qevdlqqlmk dvkdrtidln ssllqqvier krevlcilre kiittqrcti sehiqteekv
      181 sgvmgctakt ikvsvsengs lmkdssvile ippattiayg vielfikhng qfefclldeq
      241 qggfekeste gsayphsvqf rdasflyqpd avdnemysgt knlvpsdasi silkqglswl
      301 ktqfqpfmkl aedkqralyk tlcelllhee mvtalgdmfd dictgdkpdl eelkpeqqrd
      361 lldflqllgc slkselllqk yqpqdeelfs aahllisais elpddtlvll raccdlhvvp
      421 alcflpnvas adgtvalssp lvatltdrgr fevvqrlfas sninlemtes svkavtmkep
      481 rffplvlyva lygfhalggn v
//
LOCUS       XP_041322721             405 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox even-skipped homolog protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322721
VERSION     XP_041322721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="homeobox even-skipped homolog protein 1"
                     /calculated_mol_wt=43146
     Region          185..241
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..405
                     /gene="EVX1"
                     /coded_by="XM_041466787.1:151..1368"
                     /db_xref="GeneID:121353178"
ORIGIN      
        1 metrkemvmf legttlgalv gkrvpnlsea vgspaaepqe kmihrncisp rpgplssrer
       61 ggggggggge deeevevlpg tgtvpesrsa aaallsagqq ppvpelpssk gqqsssdtes
      121 dfyeeievsc tpdcatgsae yqhskgpcse alagspsggg dhpkgsggsg gsqgslacsa
      181 sdqmrryrta ftreqiarle kefyrenyvs rprrcelaaa lnlpettikv wfqnrrmkdk
      241 rqrlamtwph padpafytym mshaaatgnl pypfpshlpl pyyshmgiga tsasaatpfs
      301 tplrpldtfr vlshpyprpe llcafrhpsl ypapthglss aggtpcscla chsgqsngla
      361 qrpsgsdftc sattrtdsfl tftpsvlska tsvsmdqree vpltr
//
LOCUS       XP_041322722             314 aa            linear   VRT 06-MAY-2021
DEFINITION  exosome complex component RRP42 [Pyrgilauda ruficollis].
ACCESSION   XP_041322722
VERSION     XP_041322722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="exosome complex component RRP42"
                     /calculated_mol_wt=34050
     Region          30..299
                     /region_name="RNase_PH_RRP42"
                     /note="RRP42 subunit of eukaryotic exosome; cd11367"
                     /db_xref="CDD:206772"
     Site            order(30..34,36..37,40..41,44,46,48..51,58,79,240)
                     /site_type="other"
                     /note="Rrp4 interface [polypeptide binding]"
                     /db_xref="CDD:206772"
     Site            order(67..69,74,81,85,87,106,111..112,126,134,159,161,
                     165..166,253,257..270,275..276,279..280,282..283)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:206772"
     CDS             1..314
                     /gene="EXOSC7"
                     /coded_by="XM_041466788.1:524..1468"
                     /db_xref="GeneID:121353179"
ORIGIN      
        1 meggragrqg gsaalrrrrr eaagmasvvl seaeklyivh gvqedlrvdg rgcedyrcae
       61 vetdvvsnts gsarvklget dilvgikaem gtpklekpde gyleffvdcs snspelegrg
      121 geelgtdian tlyrvfscen svdlkslcin pkehcwvlyv dvlllecggn ifdaisvavk
      181 aalfntripk vrvledeegt keielsddpy dcirlnvdev pcivtlskig yrhvvdatlq
      241 eeacslasll isvtskgait smkkvgkgsl dpesifemme tgqrvgkslh valqkildee
      301 enlgtsrpkv gflg
//
LOCUS       XP_041322723             619 aa            linear   VRT 06-MAY-2021
DEFINITION  sushi domain-containing protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322723
VERSION     XP_041322723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="sushi domain-containing protein 5"
                     /calculated_mol_wt=67495
     Region          33..127
                     /region_name="Link_Domain"
                     /note="The link domain is a hyaluronan (HA)-binding
                     domain. It functions to mediate adhesive interactions
                     during inflammatory leukocyte homing and tumor metastasis.
                     It is found in the CD44 receptor and in human TSG-6. TSG-6
                     is the protein product of the tumor...; cl02612"
                     /db_xref="CDD:470631"
     Site            43..44
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239598"
     Region          134..191
                     /region_name="Sushi"
                     /note="Sushi repeat (SCR repeat); pfam00084"
                     /db_xref="CDD:459664"
     CDS             1..619
                     /gene="SUSD5"
                     /coded_by="XM_041466789.1:1..1860"
                     /db_xref="GeneID:121353180"
ORIGIN      
        1 mapgsqrfsl tflqgvgsvf fllqiisvqa dgkvfalesk nnsqgldlae aekacvdlsa
       61 rlataeelkr avldcsfagc ttgwlasgsa gtiicrktgs kqqsvkaidv kietdpfvnd
      121 qydafcvkde dkpcgdppsf phtilhghtg femgdellyv capgyvmgnk etaftllcds
      181 cgewygqvqa cvkdeteahi dyednfpddr sipvaendhg ngreeieqeq iqlsysktse
      241 egrtgstngv tqhtdisekg skaptespvs llsqknlfwf psetfsepes eketddstkv
      301 qfsegdnrig vktvydepgt kmfydsedfp igpilttndt ktamdavait deswldgypv
      361 tqevveddee gdkvdgsmgt eddiilttdq pnhvevrkle ngspapeegq tqivaattvv
      421 ddegaeetav pltsvsglen fsvsrgygda vwehpatsle tvtqepttti lfdissskts
      481 lsetsvttsp sdhtpyteqr dtttypeqva ttapapdiit dtasqelaeq enltqglgek
      541 pvptsepceg edcpksskga iiavivillc lllvaavlav wffkkrqqkn svyklngrcq
      601 prhhcyhhyh hqhiemqkv
//
LOCUS       XP_041322724             346 aa            linear   VRT 06-MAY-2021
DEFINITION  secreted frizzled-related protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322724
VERSION     XP_041322724.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466790.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="secreted frizzled-related protein 4"
                     /calculated_mol_wt=39511
     Region          19..145
                     /region_name="CRD_SFRP4"
                     /note="Cysteine-rich domain of the secreted
                     frizzled-related protein 4 (SFRP4), a Wnt antagonist;
                     cd07442"
                     /db_xref="CDD:143551"
     Site            order(30,32..34,36..38)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143551"
     Region          187..295
                     /region_name="NTR_Sfrp3_like"
                     /note="NTR domain, Secreted frizzled-related protein
                     (Sfrp) 3-like subfamily; composed of proteins similar to
                     human Sfrp3 and Sfrp4. Sfrps are soluble proteins
                     containing an NTR domain C-terminal to a cysteine-rich
                     Frizzled domain. They show diverse functions...; cd03581"
                     /db_xref="CDD:239636"
     CDS             1..346
                     /gene="SFRP4"
                     /coded_by="XM_041466790.1:925..1965"
                     /db_xref="GeneID:121353181"
ORIGIN      
        1 mlralvavsl wlrvspraqg apceavripm crsmpwnitr mpnhlhhstq enavlaieqy
       61 eelvatgcsp vlpfflcamy apictlefly dpikpcrsvc qrardgcepi mrrynhswpe
      121 slacddlpvy drgvcispea ivtdvpedvk wtdftqgfmv pdrplepdcr nrgqercrck
      181 ktkptlstyl aknysyiiha kvksvergnc neittvvevk dilkssmpip lsqvplltns
      241 scqcpplqpk qdvlimcyew rsrlmlldgc lvekwkdqln rrfkrweqrl qeqkrrtars
      301 knqnsgrsgq sgalkpqtkn tnpvisgpkk aikirngqke inpkrv
//
LOCUS       XP_041322725             201 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 E2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322725
VERSION     XP_041322725.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466791.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="ubiquitin-conjugating enzyme E2 E2"
                     /calculated_mol_wt=22111
     Region          58..198
                     /region_name="UBCc_UBE2E"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 E1-E3 and
                     related proteins; cd23793"
                     /db_xref="CDD:467413"
     CDS             1..201
                     /gene="LOC121353182"
                     /coded_by="XM_041466791.1:285..890"
                     /db_xref="GeneID:121353182"
ORIGIN      
        1 mstegqrvdd spstsggssd gdqregvqqe qereqvqpkk kegkisskta aklstsakri
       61 qkelaeitld pppncsagpk gdniyewrst ilgppgsvye ggvfflditf spdypfkppk
      121 vtfrtriyhc ninsqgvicl dilkdnwspa ltiskvllsi cslltdcnpa dplvgsiatq
      181 ymtnraehdr marqwtkrya t
//
LOCUS       XP_041322726             201 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 E2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322726
VERSION     XP_041322726.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466792.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="ubiquitin-conjugating enzyme E2 E2"
                     /calculated_mol_wt=22111
     Region          58..198
                     /region_name="UBCc_UBE2E"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin conjugating enzyme E2 E1-E3 and
                     related proteins; cd23793"
                     /db_xref="CDD:467413"
     CDS             1..201
                     /gene="LOC121353182"
                     /coded_by="XM_041466792.1:280..885"
                     /db_xref="GeneID:121353182"
ORIGIN      
        1 mstegqrvdd spstsggssd gdqregvqqe qereqvqpkk kegkisskta aklstsakri
       61 qkelaeitld pppncsagpk gdniyewrst ilgppgsvye ggvfflditf spdypfkppk
      121 vtfrtriyhc ninsqgvicl dilkdnwspa ltiskvllsi cslltdcnpa dplvgsiatq
      181 ymtnraehdr marqwtkrya t
//
LOCUS       XP_041322727              76 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec61 subunit gamma isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322727
VERSION     XP_041322727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..76
                     /product="protein transport protein Sec61 subunit gamma
                     isoform X1"
                     /calculated_mol_wt=8548
     Region          <20..76
                     /region_name="secE"
                     /note="preprotein translocase subunit SecE; Reviewed;
                     cl00481"
                     /db_xref="CDD:469787"
     CDS             1..76
                     /gene="SEC61G"
                     /coded_by="XM_041466793.1:2..232"
                     /db_xref="GeneID:121353184"
ORIGIN      
        1 mymslqaimd qvmqfvepsr qfvkdsirlv krctkpdrke fqkiamatai gfaimgfigf
       61 fvklihipin niivgg
//
LOCUS       XP_041322728              68 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec61 subunit gamma isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322728
VERSION     XP_041322728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..68
                     /product="protein transport protein Sec61 subunit gamma
                     isoform X2"
                     /calculated_mol_wt=7610
     Region          <12..68
                     /region_name="secE"
                     /note="preprotein translocase subunit SecE; Reviewed;
                     cl00481"
                     /db_xref="CDD:469787"
     CDS             1..68
                     /gene="SEC61G"
                     /coded_by="XM_041466794.1:145..351"
                     /db_xref="GeneID:121353184"
ORIGIN      
        1 mdqvmqfvep srqfvkdsir lvkrctkpdr kefqkiamat aigfaimgfi gffvklihip
       61 inniivgg
//
LOCUS       XP_041322729             479 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate--hydroxymethylglutarate CoA-transferase isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322729
VERSION     XP_041322729.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466795.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..479
                     /product="succinate--hydroxymethylglutarate
                     CoA-transferase isoform X1"
                     /calculated_mol_wt=51176
     Region          61..474
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
     CDS             1..479
                     /gene="SUGCT"
                     /coded_by="XM_041466795.1:18..1457"
                     /db_xref="GeneID:121353185"
ORIGIN      
        1 mlraglgrrs rccgglwrsp cpeaaggsar alsaasacps pgcgvgarsg gappagvsnv
       61 kpldgvkild ltrvlagpfa tmnlgdlgae vikverpgag ddtrawgppf agtesvyfls
      121 vnrnkksiai nmkdskgvkl ikelaaasdv fvenfvpgkl aemglgyedi kkiaphivyc
      181 sitgygqtgp vvqrggydsi aaavsglmhi tghedgepvr pgvamtdlat glytygavma
      241 gllqrhktgk glhidcnlls tqniwrknke mkwllipgns dvaclthvaa nylnckieak
      301 rwgtahgniv pyqafktkdg yivvgagndh qfvtvckiln lpevskdsry ktntlrvqnr
      361 kelidilstr fsekatiewl qifegsgvpy gpinnmqqvf sdpqvlhnel vmemnhptag
      421 kiavpgpgvr ysefavshpk ppplvgqhtv eilksvlgye ddaieellcs gavaqhevr
//
LOCUS       XP_041322731             460 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate--hydroxymethylglutarate CoA-transferase isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322731
VERSION     XP_041322731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466797.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..460
                     /product="succinate--hydroxymethylglutarate
                     CoA-transferase isoform X2"
                     /calculated_mol_wt=48851
     Region          61..455
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
     CDS             1..460
                     /gene="SUGCT"
                     /coded_by="XM_041466797.1:18..1400"
                     /db_xref="GeneID:121353185"
ORIGIN      
        1 mlraglgrrs rccgglwrsp cpeaaggsar alsaasacps pgcgvgarsg gappagvsnv
       61 kpldgvkild ltrvlagpfa tmnlgdlgae vikverpgag ddtrawgppf agtesvyfls
      121 vnrnkksiai nmkdskgvkl ikelaaasdv fvenfvpgkl aemglgyedi kkiaphivyc
      181 sitgygqtgp vvqrggydsi aaavsglmhi tghedgepvr pgvamtdlat glytygavma
      241 gllqrhktgk glhidcnlls tqvaclthva anylnckiea krwgtahgni vpyqafktkd
      301 gyivvgagnd hqfvtvckil nlpevskdsr yktntlrvqn rkelidilst rfsekatiew
      361 lqifegsgvp ygpinnmqqv fsdpqvlhne lvmemnhpta gkiavpgpgv rysefavshp
      421 kppplvgqht veilksvlgy eddaieellc sgavaqhevr
//
LOCUS       XP_041322732             451 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate--hydroxymethylglutarate CoA-transferase isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322732
VERSION     XP_041322732.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466798.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..451
                     /product="succinate--hydroxymethylglutarate
                     CoA-transferase isoform X3"
                     /calculated_mol_wt=49380
     Region          44..446
                     /region_name="CaiB"
                     /note="Crotonobetainyl-CoA:carnitine CoA-transferase CaiB
                     and related acyl-CoA transferases [Lipid transport and
                     metabolism]; COG1804"
                     /db_xref="CDD:441409"
     CDS             1..451
                     /gene="SUGCT"
                     /coded_by="XM_041466798.1:50..1405"
                     /db_xref="GeneID:121353185"
ORIGIN      
        1 mlrraleepl prscrrqcqs pqrclclpfs glrrrgaerr rspgrvlagp fatmnlgdlg
       61 aevikverpg agddtrawgp pfagtesvyf lsvnrnkksi ainmkdskgv klikelaaas
      121 dvfvenfvpg klaemglgye dikkiaphiv ycsitgygqt gpvvqrggyd siaaavsglm
      181 hitghedgep vrpgvamtdl atglytygav magllqrhkt gkglhidcnl lstqniwrkn
      241 kemkwllipg nsdvaclthv aanylnckie akrwgtahgn ivpyqafktk dgyivvgagn
      301 dhqfvtvcki lnlpevskds ryktntlrvq nrkelidils trfsekatie wlqifegsgv
      361 pygpinnmqq vfsdpqvlhn elvmemnhpt agkiavpgpg vrysefavsh pkppplvgqh
      421 tveilksvlg yeddaieell csgavaqhev r
//
LOCUS       XP_041322733             372 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 5-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322733
VERSION     XP_041322733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="C-C chemokine receptor type 5-like isoform X1"
                     /calculated_mol_wt=42513
     Region          52..328
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          54..78
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          87..108
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          123..145
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          168..184
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          213..236
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          254..276
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          296..321
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..372
                     /gene="LOC121353186"
                     /coded_by="XM_041466799.1:113..1231"
                     /db_xref="GeneID:121353186"
ORIGIN      
        1 mkhghefthl fydqytmgne ttdytdwplt tefdysdstp cpateekhfa akflpplysl
       61 vvifgltgnm lvvlilvkyk rlksmtdiyl lnlaisdllf vfslpfwayy avhdwifgea
      121 lcrilsgvyl lgfysgiffi illtldryla ivhavlalka rtvtygvlas vvtwavavli
      181 slpgvvfhkt qkessgytcn ahypseqrna wkqfltlkmn ilgllipmli micsytriik
      241 tllqcrnekk hkavrlifii miiyfffwap ynicillrdf qgafsistce gngqlhkaiq
      301 vtetismihc cinpviyafa gekfrkylrs ffrkqiavhl skycpvfyad taerasstyt
      361 qstgeqevsa al
//
LOCUS       XP_041322734             356 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 5-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322734
VERSION     XP_041322734.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466800.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="C-C chemokine receptor type 5-like isoform X2"
                     /calculated_mol_wt=40477
     Region          36..312
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          38..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          152..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          197..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          280..305
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..356
                     /gene="LOC121353186"
                     /coded_by="XM_041466800.1:138..1208"
                     /db_xref="GeneID:121353186"
ORIGIN      
        1 mgnettdytd wplttefdys dstpcpatee khfaakflpp lyslvvifgl tgnmlvvlil
       61 vkykrlksmt diyllnlais dllfvfslpf wayyavhdwi fgealcrils gvyllgfysg
      121 iffiilltld rylaivhavl alkartvtyg vlasvvtwav avlislpgvv fhktqkessg
      181 ytcnahypse qrnawkqflt lkmnilglli pmlimicsyt riiktllqcr nekkhkavrl
      241 ifiimiiyff fwapynicil lrdfqgafsi stcegngqlh kaiqvtetis mihccinpvi
      301 yafagekfrk ylrsffrkqi avhlskycpv fyadtaeras stytqstgeq evsaal
//
LOCUS       XP_041322735             154 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C chemokine receptor type 1-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322735
VERSION     XP_041322735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..154
                     /product="C-C chemokine receptor type 1-like isoform X3"
                     /calculated_mol_wt=17840
     Region          52..>147
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          54..78
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          87..108
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          123..145
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..154
                     /gene="LOC121353186"
                     /coded_by="XM_041466801.1:113..577"
                     /db_xref="GeneID:121353186"
ORIGIN      
        1 mkhghefthl fydqytmgne ttdytdwplt tefdysdstp cpateekhfa akflpplysl
       61 vvifgltgnm lvvlilvkyk rlksmtdiyl lnlaisdllf vfslpfwayy avhdwifgea
      121 lcrilsgvyl lgfysgiffi illtldrcif hlyl
//
LOCUS       XP_041322736            1286 aa            linear   VRT 06-MAY-2021
DEFINITION  neurabin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322736
VERSION     XP_041322736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1286
                     /product="neurabin-1 isoform X1"
                     /calculated_mol_wt=142873
     Region          452..515
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          519..608
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(531..537,555,558,588,592,595..596)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          623..>789
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          1170..1239
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1286
                     /gene="PPP1R9A"
                     /coded_by="XM_041466802.1:411..4271"
                     /db_xref="GeneID:121353187"
ORIGIN      
        1 mmktessger stlrsasphr nayrtefqal kstfdkpkdg dqkakeegea sqsrgrkygs
       61 nvnriknlfm qmgmeptesa gvapktrgkg gppspqrrir pkefvekadg sivklessvs
      121 erisrfdtih dgpsyskfte trkmfernah etghsnrysp kkekiissel pdewyssksh
      181 rgstdsldsl sprtetvspt vsqlsavfen tdshnvnvek senneeysvt ghyplnlsst
      241 vtnisspaan legfsplkea stwsppakqs tgvmsvensq qtntpstprq kvstgtlags
      301 ktteeikkst easagsvess atgqqdlvgv ldsersvdsc arskskaetg vlvqqkeqse
      361 htegifdrpe aaeltrnvas ggdfatdate shydedsekd ghedvnnfqs shvymhsdyn
      421 vyrvrsryns dwgetgteqd dlddsdennc yepdmeysei nglpdedeip anrkiqfsra
      481 pikvfntysn edydrrndev dpvaasaeye lekrveklel fpvelekded glgisiigmg
      541 vgadaglekl gifvktvteg gtaerdgriq vndqivevdg islvgvtqnf aatvlrntke
      601 kvrfvigrek pgqvsevaql isqtleqerr qrelleqhya qydadddelq ikhavteaei
      661 qklktklqaa enekvrwele ktqlqqniee nkermmkles ywieaqtlch tvnehlketq
      721 sqyqalekky nkakklikdf qqkeldfikr qeaerkkied lekahlvevq glqariqdle
      781 aevfrlmkqn gsqvnnnnni ferqtsfgev srgdpvenld tkqvtcldgl sqdfneavpe
      841 terldskalk traqlsvknk rqrpsrtrly dsisstdged slerkpshsy sspmhisksp
      901 lplcmrassp asdsgassls pvassaaisl dnltenqeee qhhkggvlsp yargdtplss
      961 psksghssea splhhpagrn ilqdkdgats aqaartaspt ighteklkrk ladlgaplrr
     1021 ssskgkkrke keavrvacgs ravremlqkp anskslaers sslphcvplt wygesgkgsn
     1081 sssnlpspts stepssenls pakkgsknft fnddfspsst ssadlsglga epktpgfshs
     1141 lalssdesld middeilddg qspkhsqcqs ravhewsvqq vshwlmslnl eqyvsefsaq
     1201 ningehllql dgsklkalgm tssqdraiik rklkemkasl ekarkaqekm ekqreklrkk
     1261 eqeqlqrrsk kidkcssdat egtneq
//
LOCUS       XP_041322737            1286 aa            linear   VRT 06-MAY-2021
DEFINITION  neurabin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322737
VERSION     XP_041322737.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466803.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1286
                     /product="neurabin-1 isoform X1"
                     /calculated_mol_wt=142873
     Region          452..515
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          519..608
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(531..537,555,558,588,592,595..596)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          623..>789
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          1170..1239
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1286
                     /gene="PPP1R9A"
                     /coded_by="XM_041466803.1:444..4304"
                     /db_xref="GeneID:121353187"
ORIGIN      
        1 mmktessger stlrsasphr nayrtefqal kstfdkpkdg dqkakeegea sqsrgrkygs
       61 nvnriknlfm qmgmeptesa gvapktrgkg gppspqrrir pkefvekadg sivklessvs
      121 erisrfdtih dgpsyskfte trkmfernah etghsnrysp kkekiissel pdewyssksh
      181 rgstdsldsl sprtetvspt vsqlsavfen tdshnvnvek senneeysvt ghyplnlsst
      241 vtnisspaan legfsplkea stwsppakqs tgvmsvensq qtntpstprq kvstgtlags
      301 ktteeikkst easagsvess atgqqdlvgv ldsersvdsc arskskaetg vlvqqkeqse
      361 htegifdrpe aaeltrnvas ggdfatdate shydedsekd ghedvnnfqs shvymhsdyn
      421 vyrvrsryns dwgetgteqd dlddsdennc yepdmeysei nglpdedeip anrkiqfsra
      481 pikvfntysn edydrrndev dpvaasaeye lekrveklel fpvelekded glgisiigmg
      541 vgadaglekl gifvktvteg gtaerdgriq vndqivevdg islvgvtqnf aatvlrntke
      601 kvrfvigrek pgqvsevaql isqtleqerr qrelleqhya qydadddelq ikhavteaei
      661 qklktklqaa enekvrwele ktqlqqniee nkermmkles ywieaqtlch tvnehlketq
      721 sqyqalekky nkakklikdf qqkeldfikr qeaerkkied lekahlvevq glqariqdle
      781 aevfrlmkqn gsqvnnnnni ferqtsfgev srgdpvenld tkqvtcldgl sqdfneavpe
      841 terldskalk traqlsvknk rqrpsrtrly dsisstdged slerkpshsy sspmhisksp
      901 lplcmrassp asdsgassls pvassaaisl dnltenqeee qhhkggvlsp yargdtplss
      961 psksghssea splhhpagrn ilqdkdgats aqaartaspt ighteklkrk ladlgaplrr
     1021 ssskgkkrke keavrvacgs ravremlqkp anskslaers sslphcvplt wygesgkgsn
     1081 sssnlpspts stepssenls pakkgsknft fnddfspsst ssadlsglga epktpgfshs
     1141 lalssdesld middeilddg qspkhsqcqs ravhewsvqq vshwlmslnl eqyvsefsaq
     1201 ningehllql dgsklkalgm tssqdraiik rklkemkasl ekarkaqekm ekqreklrkk
     1261 eqeqlqrrsk kidkcssdat egtneq
//
LOCUS       XP_041322738            1278 aa            linear   VRT 06-MAY-2021
DEFINITION  neurabin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322738
VERSION     XP_041322738.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466804.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1278
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1278
                     /product="neurabin-1 isoform X2"
                     /calculated_mol_wt=141954
     Region          452..515
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          519..608
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(531..537,555,558,588,592,595..596)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          623..>789
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          1162..1231
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1278
                     /gene="PPP1R9A"
                     /coded_by="XM_041466804.1:411..4247"
                     /db_xref="GeneID:121353187"
ORIGIN      
        1 mmktessger stlrsasphr nayrtefqal kstfdkpkdg dqkakeegea sqsrgrkygs
       61 nvnriknlfm qmgmeptesa gvapktrgkg gppspqrrir pkefvekadg sivklessvs
      121 erisrfdtih dgpsyskfte trkmfernah etghsnrysp kkekiissel pdewyssksh
      181 rgstdsldsl sprtetvspt vsqlsavfen tdshnvnvek senneeysvt ghyplnlsst
      241 vtnisspaan legfsplkea stwsppakqs tgvmsvensq qtntpstprq kvstgtlags
      301 ktteeikkst easagsvess atgqqdlvgv ldsersvdsc arskskaetg vlvqqkeqse
      361 htegifdrpe aaeltrnvas ggdfatdate shydedsekd ghedvnnfqs shvymhsdyn
      421 vyrvrsryns dwgetgteqd dlddsdennc yepdmeysei nglpdedeip anrkiqfsra
      481 pikvfntysn edydrrndev dpvaasaeye lekrveklel fpvelekded glgisiigmg
      541 vgadaglekl gifvktvteg gtaerdgriq vndqivevdg islvgvtqnf aatvlrntke
      601 kvrfvigrek pgqvsevaql isqtleqerr qrelleqhya qydadddelq ikhavteaei
      661 qklktklqaa enekvrwele ktqlqqniee nkermmkles ywieaqtlch tvnehlketq
      721 sqyqalekky nkakklikdf qqkeldfikr qeaerkkied lekahlvevq glqariqdle
      781 aevfrlmkqn gsqvnnnnni ferqtsfgev srgdpvenld tkqvtcldgl sqdfneavpe
      841 terldskalk traqlsvknk rqrpsrtrly dsisstdged slerkpshsy sspmhisksp
      901 lplcmrassp asdsgassls pvassaaisl dnltenqeee qhhkggvlsp yargdtplss
      961 psksghssea splhhpagrn ilqdkdgats aqaartaspt ighteklkrk ladlgaplrr
     1021 ssskgkkrke keavrvacgs ravremlqkp anskslaers sslphcvplt wygesgkgsn
     1081 sssnlpspts stepssenls pakkgsknft fnddfspsst ssadlsglga epktpgfshs
     1141 lalssdeild dgqspkhsqc qsravhewsv qqvshwlmsl nleqyvsefs aqningehll
     1201 qldgsklkal gmtssqdrai ikrklkemka slekarkaqe kmekqreklr kkeqeqlqrr
     1261 skkidkcssd ategtneq
//
LOCUS       XP_041322739            1064 aa            linear   VRT 06-MAY-2021
DEFINITION  neurabin-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322739
VERSION     XP_041322739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1064
                     /product="neurabin-1 isoform X3"
                     /calculated_mol_wt=119708
     Region          452..515
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          519..608
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(531..537,555,558,588,592,595..596)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          623..>789
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          948..1017
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1064
                     /gene="PPP1R9A"
                     /coded_by="XM_041466805.1:412..3606"
                     /db_xref="GeneID:121353187"
ORIGIN      
        1 mmktessger stlrsasphr nayrtefqal kstfdkpkdg dqkakeegea sqsrgrkygs
       61 nvnriknlfm qmgmeptesa gvapktrgkg gppspqrrir pkefvekadg sivklessvs
      121 erisrfdtih dgpsyskfte trkmfernah etghsnrysp kkekiissel pdewyssksh
      181 rgstdsldsl sprtetvspt vsqlsavfen tdshnvnvek senneeysvt ghyplnlsst
      241 vtnisspaan legfsplkea stwsppakqs tgvmsvensq qtntpstprq kvstgtlags
      301 ktteeikkst easagsvess atgqqdlvgv ldsersvdsc arskskaetg vlvqqkeqse
      361 htegifdrpe aaeltrnvas ggdfatdate shydedsekd ghedvnnfqs shvymhsdyn
      421 vyrvrsryns dwgetgteqd dlddsdennc yepdmeysei nglpdedeip anrkiqfsra
      481 pikvfntysn edydrrndev dpvaasaeye lekrveklel fpvelekded glgisiigmg
      541 vgadaglekl gifvktvteg gtaerdgriq vndqivevdg islvgvtqnf aatvlrntke
      601 kvrfvigrek pgqvsevaql isqtleqerr qrelleqhya qydadddelq ikhavteaei
      661 qklktklqaa enekvrwele ktqlqqniee nkermmkles ywieaqtlch tvnehlketq
      721 sqyqalekky nkakklikdf qqkeldfikr qeaerkkied lekahlvevq glqariqdle
      781 aevfrlmkqn gsqvnnnnni ferqtsfgev srgdpvenld tkqvtcldgl sqdfneavpe
      841 terldskalk traqlsvknk rqrpsrtrly dsisstdged slerknftfn ddfspsstss
      901 adlsglgaep ktpgfshsla lssdesldmi ddeilddgqs pkhsqcqsra vhewsvqqvs
      961 hwlmslnleq yvsefsaqni ngehllqldg sklkalgmts sqdraiikrk lkemkaslek
     1021 arkaqekmek qreklrkkeq eqlqrrskki dkcssdateg tneq
//
LOCUS       XP_041322740            1056 aa            linear   VRT 06-MAY-2021
DEFINITION  neurabin-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322740
VERSION     XP_041322740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1056
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1056
                     /product="neurabin-1 isoform X4"
                     /calculated_mol_wt=118789
     Region          452..515
                     /region_name="PDZ_5"
                     /note="PDZ domain; pfam17817"
                     /db_xref="CDD:465518"
     Region          519..608
                     /region_name="PDZ_neurabin-like"
                     /note="PDZ domain of neurabin-1 and neurabin-2, and
                     related domains; cd06790"
                     /db_xref="CDD:467252"
     Site            order(531..537,555,558,588,592,595..596)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467252"
     Region          623..>789
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          940..1009
                     /region_name="SAM_Neurabin-like"
                     /note="SAM domain of SAM_Neurabin-like subfamily; cd09512"
                     /db_xref="CDD:188911"
     CDS             1..1056
                     /gene="PPP1R9A"
                     /coded_by="XM_041466806.1:411..3581"
                     /db_xref="GeneID:121353187"
ORIGIN      
        1 mmktessger stlrsasphr nayrtefqal kstfdkpkdg dqkakeegea sqsrgrkygs
       61 nvnriknlfm qmgmeptesa gvapktrgkg gppspqrrir pkefvekadg sivklessvs
      121 erisrfdtih dgpsyskfte trkmfernah etghsnrysp kkekiissel pdewyssksh
      181 rgstdsldsl sprtetvspt vsqlsavfen tdshnvnvek senneeysvt ghyplnlsst
      241 vtnisspaan legfsplkea stwsppakqs tgvmsvensq qtntpstprq kvstgtlags
      301 ktteeikkst easagsvess atgqqdlvgv ldsersvdsc arskskaetg vlvqqkeqse
      361 htegifdrpe aaeltrnvas ggdfatdate shydedsekd ghedvnnfqs shvymhsdyn
      421 vyrvrsryns dwgetgteqd dlddsdennc yepdmeysei nglpdedeip anrkiqfsra
      481 pikvfntysn edydrrndev dpvaasaeye lekrveklel fpvelekded glgisiigmg
      541 vgadaglekl gifvktvteg gtaerdgriq vndqivevdg islvgvtqnf aatvlrntke
      601 kvrfvigrek pgqvsevaql isqtleqerr qrelleqhya qydadddelq ikhavteaei
      661 qklktklqaa enekvrwele ktqlqqniee nkermmkles ywieaqtlch tvnehlketq
      721 sqyqalekky nkakklikdf qqkeldfikr qeaerkkied lekahlvevq glqariqdle
      781 aevfrlmkqn gsqvnnnnni ferqtsfgev srgdpvenld tkqvtcldgl sqdfneavpe
      841 terldskalk traqlsvknk rqrpsrtrly dsisstdged slerknftfn ddfspsstss
      901 adlsglgaep ktpgfshsla lssdeilddg qspkhsqcqs ravhewsvqq vshwlmslnl
      961 eqyvsefsaq ningehllql dgsklkalgm tssqdraiik rklkemkasl ekarkaqekm
     1021 ekqreklrkk eqeqlqrrsk kidkcssdat egtneq
//
LOCUS       XP_041322741             287 aa            linear   VRT 06-MAY-2021
DEFINITION  serum paraoxonase/arylesterase 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322741
VERSION     XP_041322741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466807.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="serum paraoxonase/arylesterase 2-like"
                     /calculated_mol_wt=31883
     Region          <158..185
                     /region_name="Str_synth"
                     /note="Strictosidine synthase; cl22863"
                     /db_xref="CDD:354965"
     CDS             1..287
                     /gene="LOC121353189"
                     /coded_by="XM_041466807.1:57..920"
                     /db_xref="GeneID:121353189"
ORIGIN      
        1 mgkllavalv giaaalaaer llafrnrfna srevapvslp ncrlikgiet gsedidilpn
       61 glafissglk ypglksfapd kpgeiflmdl nednpravel risrgfdlas fnphgistyi
      121 drddtvylfv vnhphqkstv elfkfveddn slvhlktirh dlltryiyia dildhnvyvm
      181 ekhanwslth vktlqldtlv dnlsidphtg diwagchpng mkllyydpen lpasevlriq
      241 nilseepvvt rvysdngsvl qgssvasiye gklligtvfh ralycdl
//
LOCUS       XP_041322742             236 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322742
VERSION     XP_041322742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..236
                     /product="interleukin-6"
                     /calculated_mol_wt=26574
     Region          51..226
                     /region_name="IL6"
                     /note="Interleukin-6/G-CSF/MGF family; cl02473"
                     /db_xref="CDD:413331"
     CDS             1..236
                     /gene="IL6"
                     /coded_by="XM_041466808.1:1824..2534"
                     /db_xref="GeneID:121353190"
ORIGIN      
        1 mkfprdcgcd raragrrrpp alraalllpp llllllvpra aaaplpnads sgeaeldeaa
       61 arraalpdsl rlarllhdra aqlqdemcek ftvcqnsmem llhnnlnlpk vteedgclla
      121 gfnedkclrk issglytfqt ylkyiqetfi senqnvesls ystehlarti rqmvinpeev
      181 iipdaatqes lrtklkstka wtekitihli lrdftsfmek tvravrylkn trsfsv
//
LOCUS       XP_041322744             486 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear factor erythroid 2-related factor 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322744
VERSION     XP_041322744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="nuclear factor erythroid 2-related factor 3"
                     /calculated_mol_wt=54580
     Region          349..416
                     /region_name="bZIP_NFE2-like"
                     /note="Basic leucine zipper (bZIP) domain of Nuclear
                     Factor, Erythroid-derived 2 (NFE2) and similar proteins: a
                     DNA-binding and dimerization domain; cd14720"
                     /db_xref="CDD:269868"
     Region          350..412
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269868"
     Site            order(358..359,361..363,365..370,372..374)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269868"
     Site            order(373,376..377,380..381,383..384,387..388,390..391,
                     394..395,397..398,401..402,404..405)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269868"
     CDS             1..486
                     /gene="NFE2L3"
                     /coded_by="XM_041466810.1:120..1580"
                     /db_xref="GeneID:121353191"
ORIGIN      
        1 maedvdlkac rgalddccpp pgedqlelqe eeekdknqsn snhvdsllsl egyfqllssq
       61 venmlevnll edtqiatssr gqdpssshhn inltqtlqns fsppdamllr tdyptplnsk
      121 prhlqrqeff pqsssdttnp esqfhgsnlt glfsaadlrn ltahddnfde iklmslalee
      181 gfspievsqi feepgsdsgl plnsnhstts ysvccedsvg yssgvksaps hslgavaghc
      241 qenvkhghve ypgvaqcpte amlqqflhnh tynqlpshta stpehhqqmw mkksnevker
      301 yhnstaanrs rdewrakalr ipfsveeivs msvdsfntml aknqltetqv sllrdirrrg
      361 knkvaaqkcr krklnailnl eedvcnlqtq keslkkehsq csklisqikq klnnlyhdif
      421 srlrddqgrp vnpcqyvihc ssngsvfiip khlakseqkq dnrkeqkqik ddwsspkspl
      481 lclkgc
//
LOCUS       XP_041322745             353 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322745
VERSION     XP_041322745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="heterogeneous nuclear ribonucleoproteins A2/B1
                     isoform X1"
                     /calculated_mol_wt=37177
     Region          16..96
                     /region_name="RRM1_hnRNPA2B1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12762"
                     /db_xref="CDD:410155"
     Site            order(19,21,23..24,46,48,50,59..61,63,86,89,91..96)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410155"
     Region          109..188
                     /region_name="RRM2_hnRNPA2B1"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12581"
                     /db_xref="CDD:409995"
     Region          302..326
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..353
                     /gene="HNRNPA2B1"
                     /coded_by="XM_041466811.1:16..1077"
                     /db_xref="GeneID:121353193"
ORIGIN      
        1 mhggekerrr grekeqfrkl figglsfett eeslrsyyeq wgkltdcvvm rdpaskrsrg
       61 fgfvtfssma evdaamaarp htidgrvvep kravareesg kpgahvtvkk lfvggikedt
      121 eehhlrdyfe eygkidtiei itdrqsgkkr gfgfvtfddh dpvdkivlqk yhtinghnae
      181 vrkalsrqem qevqnsrsgr ggnfgfgdar ggggnfgpgp gsnfrggagk tdgygsgrgf
      241 gdgyngyggg pgggnfggsp gygggrggyg gggpgygnqg ggygggydny gggnygsgny
      301 ndfgnynqqp snygpmksgn fggsrnmggp ygggnygpgg sggsggyggr sry
//
LOCUS       XP_041322746             353 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322746
VERSION     XP_041322746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="heterogeneous nuclear ribonucleoproteins A2/B1
                     isoform X1"
                     /calculated_mol_wt=37177
     Region          16..96
                     /region_name="RRM1_hnRNPA2B1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12762"
                     /db_xref="CDD:410155"
     Site            order(19,21,23..24,46,48,50,59..61,63,86,89,91..96)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410155"
     Region          109..188
                     /region_name="RRM2_hnRNPA2B1"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12581"
                     /db_xref="CDD:409995"
     Region          302..326
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..353
                     /gene="HNRNPA2B1"
                     /coded_by="XM_041466812.1:16..1077"
                     /db_xref="GeneID:121353193"
ORIGIN      
        1 mhggekerrr grekeqfrkl figglsfett eeslrsyyeq wgkltdcvvm rdpaskrsrg
       61 fgfvtfssma evdaamaarp htidgrvvep kravareesg kpgahvtvkk lfvggikedt
      121 eehhlrdyfe eygkidtiei itdrqsgkkr gfgfvtfddh dpvdkivlqk yhtinghnae
      181 vrkalsrqem qevqnsrsgr ggnfgfgdar ggggnfgpgp gsnfrggagk tdgygsgrgf
      241 gdgyngyggg pgggnfggsp gygggrggyg gggpgygnqg ggygggydny gggnygsgny
      301 ndfgnynqqp snygpmksgn fggsrnmggp ygggnygpgg sggsggyggr sry
//
LOCUS       XP_041322747             352 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoproteins A2/B1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322747
VERSION     XP_041322747.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466813.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="heterogeneous nuclear ribonucleoproteins A2/B1
                     isoform X2"
                     /calculated_mol_wt=37113
     Region          15..95
                     /region_name="RRM1_hnRNPA2B1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12762"
                     /db_xref="CDD:410155"
     Site            order(18,20,22..23,45,47,49,58..60,62,85,88,90..95)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410155"
     Region          108..187
                     /region_name="RRM2_hnRNPA2B1"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12581"
                     /db_xref="CDD:409995"
     Region          301..325
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..352
                     /gene="HNRNPA2B1"
                     /coded_by="XM_041466813.1:215..1273"
                     /db_xref="GeneID:121353193"
ORIGIN      
        1 mprgdresdw rekeqfrklf igglsfette eslrsyyeqw gkltdcvvmr dpaskrsrgf
       61 gfvtfssmae vdaamaarph tidgrvvepk ravareesgk pgahvtvkkl fvggikedte
      121 ehhlrdyfee ygkidtieii tdrqsgkkrg fgfvtfddhd pvdkivlqky htinghnaev
      181 rkalsrqemq evqnsrsgrg gnfgfgdarg gggnfgpgpg snfrggagkt dgygsgrgfg
      241 dgyngygggp gggnfggspg ygggrggygg ggpgygnqgg gygggydnyg ggnygsgnyn
      301 dfgnynqqps nygpmksgnf ggsrnmggpy gggnygpggs ggsggyggrs ry
//
LOCUS       XP_041322748             350 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoproteins A2/B1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322748
VERSION     XP_041322748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="heterogeneous nuclear ribonucleoproteins A2/B1
                     isoform X3"
                     /calculated_mol_wt=36891
     Region          16..96
                     /region_name="RRM1_hnRNPA2B1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12762"
                     /db_xref="CDD:410155"
     Site            order(19,21,23..24,46,48,50,59..61,63,86,89,91..96)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410155"
     Region          109..188
                     /region_name="RRM2_hnRNPA2B1"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12581"
                     /db_xref="CDD:409995"
     Region          299..323
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..350
                     /gene="HNRNPA2B1"
                     /coded_by="XM_041466814.1:16..1068"
                     /db_xref="GeneID:121353193"
ORIGIN      
        1 mhggekerrr grekeqfrkl figglsfett eeslrsyyeq wgkltdcvvm rdpaskrsrg
       61 fgfvtfssma evdaamaarp htidgrvvep kravareesg kpgahvtvkk lfvggikedt
      121 eehhlrdyfe eygkidtiei itdrqsgkkr gfgfvtfddh dpvdkivlqk yhtinghnae
      181 vrkalsrqem qevqnsrsgr ggnfgfgdar ggggnfgpgp gsnfrggadg ygsgrgfgdg
      241 yngygggpgg gnfggspgyg ggrggygggg pgygnqgggy gggydnyggg nygsgnyndf
      301 gnynqqpsny gpmksgnfgg srnmggpygg gnygpggsgg sggyggrsry
//
LOCUS       XP_041322749             350 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoproteins A2/B1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322749
VERSION     XP_041322749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="heterogeneous nuclear ribonucleoproteins A2/B1
                     isoform X3"
                     /calculated_mol_wt=36891
     Region          16..96
                     /region_name="RRM1_hnRNPA2B1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12762"
                     /db_xref="CDD:410155"
     Site            order(19,21,23..24,46,48,50,59..61,63,86,89,91..96)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410155"
     Region          109..188
                     /region_name="RRM2_hnRNPA2B1"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12581"
                     /db_xref="CDD:409995"
     Region          299..323
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..350
                     /gene="HNRNPA2B1"
                     /coded_by="XM_041466815.1:16..1068"
                     /db_xref="GeneID:121353193"
ORIGIN      
        1 mhggekerrr grekeqfrkl figglsfett eeslrsyyeq wgkltdcvvm rdpaskrsrg
       61 fgfvtfssma evdaamaarp htidgrvvep kravareesg kpgahvtvkk lfvggikedt
      121 eehhlrdyfe eygkidtiei itdrqsgkkr gfgfvtfddh dpvdkivlqk yhtinghnae
      181 vrkalsrqem qevqnsrsgr ggnfgfgdar ggggnfgpgp gsnfrggadg ygsgrgfgdg
      241 yngygggpgg gnfggspgyg ggrggygggg pgygnqgggy gggydnyggg nygsgnyndf
      301 gnynqqpsny gpmksgnfgg srnmggpygg gnygpggsgg sggyggrsry
//
LOCUS       XP_041322750             349 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoproteins A2/B1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322750
VERSION     XP_041322750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..349
                     /product="heterogeneous nuclear ribonucleoproteins A2/B1
                     isoform X4"
                     /calculated_mol_wt=36827
     Region          15..95
                     /region_name="RRM1_hnRNPA2B1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12762"
                     /db_xref="CDD:410155"
     Site            order(18,20,22..23,45,47,49,58..60,62,85,88,90..95)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410155"
     Region          108..187
                     /region_name="RRM2_hnRNPA2B1"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12581"
                     /db_xref="CDD:409995"
     Region          298..322
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..349
                     /gene="HNRNPA2B1"
                     /coded_by="XM_041466816.1:215..1264"
                     /db_xref="GeneID:121353193"
ORIGIN      
        1 mprgdresdw rekeqfrklf igglsfette eslrsyyeqw gkltdcvvmr dpaskrsrgf
       61 gfvtfssmae vdaamaarph tidgrvvepk ravareesgk pgahvtvkkl fvggikedte
      121 ehhlrdyfee ygkidtieii tdrqsgkkrg fgfvtfddhd pvdkivlqky htinghnaev
      181 rkalsrqemq evqnsrsgrg gnfgfgdarg gggnfgpgpg snfrggadgy gsgrgfgdgy
      241 ngygggpggg nfggspgygg grggyggggp gygnqgggyg ggydnygggn ygsgnyndfg
      301 nynqqpsnyg pmksgnfggs rnmggpyggg nygpggsggs ggyggrsry
//
LOCUS       XP_041322752             346 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoproteins A2/B1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322752
VERSION     XP_041322752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466818.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="heterogeneous nuclear ribonucleoproteins A2/B1
                     isoform X5"
                     /calculated_mol_wt=36388
     Region          9..89
                     /region_name="RRM1_hnRNPA2B1"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12762"
                     /db_xref="CDD:410155"
     Site            order(12,14,16..17,39,41,43,52..54,56,79,82,84..89)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410155"
     Region          102..181
                     /region_name="RRM2_hnRNPA2B1"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein A2/B1 (hnRNP
                     A2/B1) and similar proteins; cd12581"
                     /db_xref="CDD:409995"
     Region          295..319
                     /region_name="HnRNPA1"
                     /note="Nuclear factor hnRNPA1; pfam11627"
                     /db_xref="CDD:463312"
     CDS             1..346
                     /gene="HNRNPA2B1"
                     /coded_by="XM_041466818.1:139..1179"
                     /db_xref="GeneID:121353193"
ORIGIN      
        1 mknmrekeqf rklfigglsf etteeslrsy yeqwgkltdc vvmrdpaskr srgfgfvtfs
       61 smaevdaama arphtidgrv vepkravare esgkpgahvt vkklfvggik edteehhlrd
      121 yfeeygkidt ieiitdrqsg kkrgfgfvtf ddhdpvdkiv lqkyhtingh naevrkalsr
      181 qemqevqnsr sgrggnfgfg darggggnfg pgpgsnfrgg agktdgygsg rgfgdgyngy
      241 gggpgggnfg gspgygggrg gyggggpgyg nqgggygggy dnygggnygs gnyndfgnyn
      301 qqpsnygpmk sgnfggsrnm ggpygggnyg pggsggsggy ggrsry
//
LOCUS       XP_041322753             342 aa            linear   VRT 06-MAY-2021
DEFINITION  chromobox protein homolog 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322753
VERSION     XP_041322753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="chromobox protein homolog 3 isoform X1"
                     /calculated_mol_wt=38153
     Region          <215..236
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     Region          275..332
                     /region_name="CSD_HP1gamma_Cbx3"
                     /note="chromo shadow domain of heterochromatin protein 1
                     gamma homolog gamma; cd18656"
                     /db_xref="CDD:349303"
     Site            order(286..290,298,307,327,330..331)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(288,326..328,330..331)
                     /site_type="other"
                     /note="putative binding pit [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(313,316,320..321,323..324,327..328)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349303"
     CDS             1..342
                     /gene="CBX3"
                     /coded_by="XM_041466819.1:1..1029"
                     /db_xref="GeneID:121353194"
ORIGIN      
        1 mavsemsrrs crrrayllrq rpekaepgme ahstrfgnfr nlpqhakmal gassaisgqk
       61 daashrlvqp arqfpttdrl arraraqpkr prtllasfnl flvffrkltk gpegsnlgvn
      121 icrgrariap rnlalapfpp pprqeevrat eilaqvrhia gsrrreadft aarsvlprtv
      181 gigraarsaa vfssppsspp ffplrrpyth rdkgadntwe peenldcpel ieaflnsqka
      241 gkektdgakr kslsdsesdd skskkkrdsv dkprgfargl dperiigatd ssgelmflmk
      301 wkdsdeadlv lakeanvkcp qiviafyeer ltwhscpede aq
//
LOCUS       XP_041322754             272 aa            linear   VRT 06-MAY-2021
DEFINITION  chromobox protein homolog 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322754
VERSION     XP_041322754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466820.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..272
                     /product="chromobox protein homolog 3 isoform X2"
                     /calculated_mol_wt=30301
     Region          <215..236
                     /region_name="CD_CSD"
                     /note="CHROMO (CHRromatin Organization Modifier) domains
                     and chromo shadow domains; cl28914"
                     /db_xref="CDD:475127"
     CDS             1..272
                     /gene="CBX3"
                     /coded_by="XM_041466820.1:1..819"
                     /db_xref="GeneID:121353194"
ORIGIN      
        1 mavsemsrrs crrrayllrq rpekaepgme ahstrfgnfr nlpqhakmal gassaisgqk
       61 daashrlvqp arqfpttdrl arraraqpkr prtllasfnl flvffrkltk gpegsnlgvn
      121 icrgrariap rnlalapfpp pprqeevrat eilaqvrhia gsrrreadft aarsvlprtv
      181 gigraarsaa vfssppsspp ffplrrpyth rdkgadntwe peenldcpel ieaflnsqka
      241 gkektdgakr kslsdsesdd skskkkrdse rl
//
LOCUS       XP_041322755             190 aa            linear   VRT 06-MAY-2021
DEFINITION  chromobox protein homolog 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322755
VERSION     XP_041322755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="chromobox protein homolog 3 isoform X3"
                     /calculated_mol_wt=21407
     Region          35..84
                     /region_name="CD_HP1gamma_Cbx3"
                     /note="chromodomain of heterochromatin protein 1 homolog
                     gamma; cd18652"
                     /db_xref="CDD:349299"
     Site            order(35..38,55,57,60,68..69,71..75,78)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349299"
     Region          123..180
                     /region_name="CSD_HP1gamma_Cbx3"
                     /note="chromo shadow domain of heterochromatin protein 1
                     gamma homolog gamma; cd18656"
                     /db_xref="CDD:349303"
     Site            order(134..138,146,155,175,178..179)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(136,174..176,178..179)
                     /site_type="other"
                     /note="putative binding pit [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(161,164,168..169,171..172,175..176)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349303"
     CDS             1..190
                     /gene="CBX3"
                     /coded_by="XM_041466821.1:105..677"
                     /db_xref="GeneID:121353194"
ORIGIN      
        1 memfptcsll assphkmgkk qngkgkkvee aepeefvvek vldrrvvngk veyylkwkgf
       61 tdadntwepe enldcpelie aflnsqkagk ektdgakrks lsdsesddsk skkkrdsvdk
      121 prgfargldp eriigatdss gelmflmkwk dsdeadlvla keanvkcpqi viafyeerlt
      181 whscpedeaq
//
LOCUS       XP_041322757             184 aa            linear   VRT 06-MAY-2021
DEFINITION  chromobox protein homolog 3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322757
VERSION     XP_041322757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="chromobox protein homolog 3 isoform X4"
                     /calculated_mol_wt=20758
     Region          29..78
                     /region_name="CD_HP1gamma_Cbx3"
                     /note="chromodomain of heterochromatin protein 1 homolog
                     gamma; cd18652"
                     /db_xref="CDD:349299"
     Site            order(29..32,49,51,54,62..63,65..69,72)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349299"
     Region          117..174
                     /region_name="CSD_HP1gamma_Cbx3"
                     /note="chromo shadow domain of heterochromatin protein 1
                     gamma homolog gamma; cd18656"
                     /db_xref="CDD:349303"
     Site            order(128..132,140,149,169,172..173)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(130,168..170,172..173)
                     /site_type="other"
                     /note="putative binding pit [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(155,158,162..163,165..166,169..170)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349303"
     CDS             1..184
                     /gene="CBX3"
                     /coded_by="XM_041466823.1:166..720"
                     /db_xref="GeneID:121353194"
ORIGIN      
        1 masnkttlhk mgkkqngkgk kveeaepeef vvekvldrrv vngkveyylk wkgftdadnt
       61 wepeenldcp elieaflnsq kagkektdga krkslsdses ddskskkkrd svdkprgfar
      121 gldperiiga tdssgelmfl mkwkdsdead lvlakeanvk cpqiviafye erltwhscpe
      181 deaq
//
LOCUS       XP_041322758             184 aa            linear   VRT 06-MAY-2021
DEFINITION  chromobox protein homolog 3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322758
VERSION     XP_041322758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="chromobox protein homolog 3 isoform X4"
                     /calculated_mol_wt=20758
     Region          29..78
                     /region_name="CD_HP1gamma_Cbx3"
                     /note="chromodomain of heterochromatin protein 1 homolog
                     gamma; cd18652"
                     /db_xref="CDD:349299"
     Site            order(29..32,49,51,54,62..63,65..69,72)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349299"
     Region          117..174
                     /region_name="CSD_HP1gamma_Cbx3"
                     /note="chromo shadow domain of heterochromatin protein 1
                     gamma homolog gamma; cd18656"
                     /db_xref="CDD:349303"
     Site            order(128..132,140,149,169,172..173)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(130,168..170,172..173)
                     /site_type="other"
                     /note="putative binding pit [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(155,158,162..163,165..166,169..170)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349303"
     CDS             1..184
                     /gene="CBX3"
                     /coded_by="XM_041466824.1:166..720"
                     /db_xref="GeneID:121353194"
ORIGIN      
        1 masnkttlhk mgkkqngkgk kveeaepeef vvekvldrrv vngkveyylk wkgftdadnt
       61 wepeenldcp elieaflnsq kagkektdga krkslsdses ddskskkkrd svdkprgfar
      121 gldperiiga tdssgelmfl mkwkdsdead lvlakeanvk cpqiviafye erltwhscpe
      181 deaq
//
LOCUS       XP_041322759             174 aa            linear   VRT 06-MAY-2021
DEFINITION  chromobox protein homolog 3 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322759
VERSION     XP_041322759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="chromobox protein homolog 3 isoform X5"
                     /calculated_mol_wt=19646
     Region          19..68
                     /region_name="CD_HP1gamma_Cbx3"
                     /note="chromodomain of heterochromatin protein 1 homolog
                     gamma; cd18652"
                     /db_xref="CDD:349299"
     Site            order(19..22,39,41,44,52..53,55..59,62)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349299"
     Region          107..164
                     /region_name="CSD_HP1gamma_Cbx3"
                     /note="chromo shadow domain of heterochromatin protein 1
                     gamma homolog gamma; cd18656"
                     /db_xref="CDD:349303"
     Site            order(118..122,130,139,159,162..163)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(120,158..160,162..163)
                     /site_type="other"
                     /note="putative binding pit [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(145,148,152..153,155..156,159..160)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349303"
     CDS             1..174
                     /gene="CBX3"
                     /coded_by="XM_041466825.1:140..664"
                     /db_xref="GeneID:121353194"
ORIGIN      
        1 mgkkqngkgk kveeaepeef vvekvldrrv vngkveyylk wkgftdadnt wepeenldcp
       61 elieaflnsq kagkektdga krkslsdses ddskskkkrd svdkprgfar gldperiiga
      121 tdssgelmfl mkwkdsdead lvlakeanvk cpqiviafye erltwhscpe deaq
//
LOCUS       XP_041322760             174 aa            linear   VRT 06-MAY-2021
DEFINITION  chromobox protein homolog 3 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322760
VERSION     XP_041322760.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466826.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="chromobox protein homolog 3 isoform X5"
                     /calculated_mol_wt=19646
     Region          19..68
                     /region_name="CD_HP1gamma_Cbx3"
                     /note="chromodomain of heterochromatin protein 1 homolog
                     gamma; cd18652"
                     /db_xref="CDD:349299"
     Site            order(19..22,39,41,44,52..53,55..59,62)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349299"
     Region          107..164
                     /region_name="CSD_HP1gamma_Cbx3"
                     /note="chromo shadow domain of heterochromatin protein 1
                     gamma homolog gamma; cd18656"
                     /db_xref="CDD:349303"
     Site            order(118..122,130,139,159,162..163)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(120,158..160,162..163)
                     /site_type="other"
                     /note="putative binding pit [polypeptide binding]"
                     /db_xref="CDD:349303"
     Site            order(145,148,152..153,155..156,159..160)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349303"
     CDS             1..174
                     /gene="CBX3"
                     /coded_by="XM_041466826.1:139..663"
                     /db_xref="GeneID:121353194"
ORIGIN      
        1 mgkkqngkgk kveeaepeef vvekvldrrv vngkveyylk wkgftdadnt wepeenldcp
       61 elieaflnsq kagkektdga krkslsdses ddskskkkrd svdkprgfar gldperiiga
      121 tdssgelmfl mkwkdsdead lvlakeanvk cpqiviafye erltwhscpe deaq
//
LOCUS       XP_041322762             337 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 158 [Pyrgilauda ruficollis].
ACCESSION   XP_041322762
VERSION     XP_041322762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="transmembrane protein 158"
                     /calculated_mol_wt=35452
     CDS             1..337
                     /gene="TMEM158"
                     /coded_by="XM_041466828.1:96..1109"
                     /db_xref="GeneID:121353196"
ORIGIN      
        1 mlpllfpall aaclppcqgw spsaaasgqe eqeqelflpp ansssrslas lemdldgaas
       61 keegstdspg tpaapsqepf psapttsgqe qpepeqpgqe qqqrpqpqgq pqpaedphcn
      121 isvqrqmlss llvrwsrplg iqcdlllfst nshgraffsa afhrvgppll iehlglaagg
      181 aqqdlrlcvg cswvrsrrvg rlrgsapqpq pqpqppaaaa aaaassssss sssssssssl
      241 syppaaepgq ywlqgeplnf ccldfsleel kgepgwrmnr kpiestlvac fmtlviivws
      301 vaaliwpvpi iagflpngme qrrgtaagta taaaaak
//
LOCUS       XP_041322763             184 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-glutamylcyclotransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041322763
VERSION     XP_041322763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="gamma-glutamylcyclotransferase"
                     /calculated_mol_wt=20199
     Site            order(13,16,18..19,91..92,99,121)
                     /site_type="active"
                     /note="putative active site pocket [active]"
                     /db_xref="CDD:119400"
     Site            order(66..67,69,99..103,105,117,120)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:119400"
     Region          72..154
                     /region_name="AIG2_2"
                     /note="AIG2-like family; pfam13772"
                     /db_xref="CDD:433465"
     Site            92
                     /site_type="active"
                     /note="putative catalytic residue [active]"
                     /db_xref="CDD:119400"
     CDS             1..184
                     /gene="GGCT"
                     /coded_by="XM_041466829.1:138..692"
                     /db_xref="GeneID:121353197"
ORIGIN      
        1 mepggesccw flyyaygsnl lrerlllrnp saalcalarl qdfklefghh qgrtssvwhg
       61 gtatiaqspg devwgivwkm ntcnlssldk qegvedgiyv pievnvhtqa gkvltcrsyq
      121 mkdyvsgpps pqykkvicmg akqnglpady qekleaietn nyagpvpime eieaaikadk
      181 insa
//
LOCUS       XP_041322764             244 aa            linear   VRT 06-MAY-2021
DEFINITION  thiamin pyrophosphokinase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322764
VERSION     XP_041322764.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466830.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..244
                     /product="thiamin pyrophosphokinase 1 isoform X1"
                     /calculated_mol_wt=26843
     Region          21..242
                     /region_name="PLN02714"
                     /note="thiamin pyrophosphokinase"
                     /db_xref="CDD:178316"
     CDS             1..244
                     /gene="TPK1"
                     /coded_by="XM_041466830.1:246..980"
                     /db_xref="GeneID:121353198"
ORIGIN      
        1 meraftplec llpagnlkfc llilnqpfnk ghfhclwsra alracadgga nclyhitegs
       61 qesflpdyis gdfdsiqpev keyykvkgce lietmdqdlt dftkclqilq kkiekkglqv
      121 dvivalgglg grfdqtmasv etlfhatnit pspviviqec sliyllqpgk hklhvdtgle
      181 gswcglipig npcesvtttg lkwnltnqvl kfgtlvstsn tydnsgivti etdkpllwtm
      241 aikt
//
LOCUS       XP_041322765             219 aa            linear   VRT 06-MAY-2021
DEFINITION  thiamin pyrophosphokinase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322765
VERSION     XP_041322765.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466831.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="thiamin pyrophosphokinase 1 isoform X2"
                     /calculated_mol_wt=23875
     Region          3..217
                     /region_name="PLN02714"
                     /note="thiamin pyrophosphokinase"
                     /db_xref="CDD:178316"
     CDS             1..219
                     /gene="TPK1"
                     /coded_by="XM_041466831.1:245..904"
                     /db_xref="GeneID:121353198"
ORIGIN      
        1 meraftplec llpaaalrac adgganclyh itegsqesfl pdyisgdfds iqpevkeyyk
       61 vkgcelietm dqdltdftkc lqilqkkiek kglqvdviva lgglggrfdq tmasvetlfh
      121 atnitpspvi viqecsliyl lqpgkhklhv dtglegswcg lipignpces vtttglkwnl
      181 tnqvlkfgtl vstsntydns givtietdkp llwtmaikt
//
LOCUS       XP_041322766             218 aa            linear   VRT 06-MAY-2021
DEFINITION  thiamin pyrophosphokinase 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322766
VERSION     XP_041322766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="thiamin pyrophosphokinase 1 isoform X3"
                     /calculated_mol_wt=24097
     Region          21..205
                     /region_name="PLN02714"
                     /note="thiamin pyrophosphokinase"
                     /db_xref="CDD:178316"
     CDS             1..218
                     /gene="TPK1"
                     /coded_by="XM_041466832.1:252..908"
                     /db_xref="GeneID:121353198"
ORIGIN      
        1 meraftplec llpagnlkfc llilnqpfnk ghfhclwsra alracadgga nclyhitegs
       61 qesflpdyis gdfdsiqpev keyykvkgce lietmdqdlt dftkclqilq kkiekkglqv
      121 dvivalgglg grfdqtmasv etlfhatnit pspviviqec sliyllqpgk hklhvdtgle
      181 gswcglipig npcesvtttg lkwnlrmetp grnkvkhc
//
LOCUS       XP_041322767             218 aa            linear   VRT 06-MAY-2021
DEFINITION  thiamin pyrophosphokinase 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322767
VERSION     XP_041322767.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466833.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="thiamin pyrophosphokinase 1 isoform X4"
                     /calculated_mol_wt=24164
     Region          21..206
                     /region_name="PLN02714"
                     /note="thiamin pyrophosphokinase"
                     /db_xref="CDD:178316"
     CDS             1..218
                     /gene="TPK1"
                     /coded_by="XM_041466833.1:252..908"
                     /db_xref="GeneID:121353198"
ORIGIN      
        1 meraftplec llpagnlkfc llilnqpfnk ghfhclwsra alracadgga nclyhitegs
       61 qesflpdyis gdfdsiqpev keyykvkgce lietmdqdlt dftkclqilq kkiekkglqv
      121 dvivalgglg grfdqtmasv etlfhatnit pspviviqec sliyllqpgk hklhvdtgle
      181 gswcglipig npcesvtttg lkwnlnhrwi sicsclyk
//
LOCUS       XP_041322768            1168 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-1(XXVIII) chain [Pyrgilauda ruficollis].
ACCESSION   XP_041322768
VERSION     XP_041322768.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466834.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1168
                     /product="collagen alpha-1(XXVIII) chain"
                     /calculated_mol_wt=121907
     Region          50..216
                     /region_name="vWFA_subfamily_ECM"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd01450"
                     /db_xref="CDD:238727"
     Site            order(50,52,73,158,160,189,216)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238727"
     Site            order(57,59,61,134,164)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238727"
     Site            order(59..61,63,134)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238727"
     Site            order(90,110..111,122..123)
                     /site_type="active"
                     /note="putative vWF-collagen binding site [active]"
                     /db_xref="CDD:238727"
     Site            order(104..105,107,138,141,145)
                     /site_type="other"
                     /note="glycoprotein Ib (GpIb) binding site [polypeptide
                     binding]"
                     /db_xref="CDD:238727"
     Region          <261..>557
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          <479..>774
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          800..972
                     /region_name="VWA"
                     /note="von Willebrand factor type A domain; pfam00092"
                     /db_xref="CDD:459670"
     Region          1116..1166
                     /region_name="Kunitz_collagen_alpha1_XXVIII"
                     /note="Kunitz-type domain from the alpha1 chain of type
                     XXVIII collagen, and similar proteins; cd22628"
                     /db_xref="CDD:438671"
     CDS             1..1168
                     /gene="COL28A1"
                     /coded_by="XM_041466834.1:135..3641"
                     /db_xref="GeneID:121353199"
ORIGIN      
        1 mkatmrkkcf ffcfillavv tnqiahgqnr krgkniyspv pidegdtcri divfiidsse
       61 saknqlfdlq kdfvqnmtds ifqmkpvksh mysvklasmq fsstviidhp ftawknvqnf
      121 kekinslgfi gqgtysyyav snathlfkte srkrsvkvaf lmtdgvdhpn spnvqgiakt
      181 arslgihfvt iglskkavqe eklrmifgds sskrvlcldd qnlvadvale leallqeqcv
      241 rktcecekgv kgdkgsdgsk gekgdpgpkg nkgdaqkgdh gekgeegtpg ykgdkgerge
      301 cgapgpkgei glqgsvgptg prgpqgirgd pgeqglkgiq gskgeqgppg pygpagspgi
      361 gepgpkgaeg regriglrgp pgigepglpg ppgppgspge kgstgqgiqg dkgekgspgv
      421 rgpsgpkgeq vkgdkgdqgq vgpqgppgpp gaglqgsqgv qgppgipgpk gsegygwpgp
      481 kgepgergqk gepgrpgnst tglkgdtglp gtpgekgvkg ekgligrkge kgdegprgpe
      541 gppgkgllgq kgdpgekgsk gmigptglqg qagpkgdrge tgppgvpgas vwgppgpkgd
      601 pgykglpgdp gipgnsimgp mgkqgppgpp gpqgakadkg dkgeagppgp agpegpegpk
      661 gvgdagpkge rgikgdpgpp gppgwghmgp kgimgrkglp glpgppgisi qgdkgekgsk
      721 glpgpkgsvg nglpgrkgdy gdkgdtgskg akgeigdpgp pgpkgsggrk gepglsredv
      781 irlineicgc gikcrttple lifvidsses vgpdnfniik tfmktfidki sasqatsrig
      841 iinfshrvdl vsslkqytnk ehlksavdkm pylgegtyta saiqeaihlf qaarpavrkv
      901 avvitdgqad srdkvrldti vreahatnie ifvigvvqrt dphyddilke mqliatdpde
      961 ehvyqiddfv tlsvlenkli tkicenesaa ytrkynilsp spsleseiar kdansllpkv
     1021 ttseidmlpt egdsnpmsnq hsptqstyte plpsaqdhsv ttsahrestl ppvyniseir
     1081 ppspvvnpfv ggtaterhqp apwqteiars pknprclepm kpgdcwnyvv kwfydksgns
     1141 cgqfwyggcn gnnnrfetek ecretcvd
//
LOCUS       XP_041322769             405 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 and cysteine-rich domain-containing protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322769
VERSION     XP_041322769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="SH3 and cysteine-rich domain-containing protein"
                     /calculated_mol_wt=45276
     Region          108..164
                     /region_name="C1_Stac1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in SH3 and cysteine-rich domain-containing protein
                     (Stac1) and similar proteins; cd20880"
                     /db_xref="CDD:410430"
     Region          167..276
                     /region_name="STAC2_u1"
                     /note="Unstructured on SH3 and cysteine-rich
                     domain-containing protein 2; pfam16664"
                     /db_xref="CDD:435497"
     Region          292..344
                     /region_name="SH3_Stac_1"
                     /note="First C-terminal Src homology 3 domain of SH3 and
                     cysteine-rich domain-containing (Stac) proteins; cd11833"
                     /db_xref="CDD:212767"
     Site            order(297,299,302,306,324..325,338,340..341)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212767"
     Region          351..401
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(356,358,361,366,384..385,398,400..401)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212690"
     CDS             1..405
                     /gene="STAC"
                     /coded_by="XM_041466835.1:110..1327"
                     /db_xref="GeneID:121353200"
ORIGIN      
        1 mippsstaev svdsvekene vesteqppsp asttsqeskl qklkrslsfk tkslrsksad
       61 nffqrtnsdv klqvdlmpev ststgqlpns dsqassptra qqlpenskth ifqehifkkp
      121 tfcdvcnhmi vgtnakhglr ckackmsihh kcadsigqqr cmgklpkgfr ryysspllih
      181 eqfgcikevm piacgnkvdp vyetlrfgts laqktkkgss gsgsdspnrn stadlvevpe
      241 egnssagtld isrkrsnsvf tysengtehf geepksihsp gpfykstlqm ntyvalykfv
      301 pqenedlemr pgdmitlled snedwwkgri ddrtgyfpan fvqrvqqnek iyrcirtfig
      361 ckeqgqitlk enqicvtsek ehdgfikvys gkkkgfvpid vleni
//
LOCUS       XP_041322771             180 aa            linear   VRT 06-MAY-2021
DEFINITION  CKLF-like MARVEL transmembrane domain-containing protein 8 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322771
VERSION     XP_041322771.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466837.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..180
                     /product="CKLF-like MARVEL transmembrane domain-containing
                     protein 8 isoform X1"
                     /calculated_mol_wt=20183
     Region          43..169
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..180
                     /gene="CMTM8"
                     /coded_by="XM_041466837.1:85..627"
                     /db_xref="GeneID:121353201"
ORIGIN      
        1 meppvppqeq pprprshtvt ttsssftanl sassstlayd reflrtvpgl lmvteivlgl
       61 lvwtliagte yflypafgwv mfvavfywvl tvffliiymt mtytripqvp wtmvglcfng
      121 safvlyliaa ivdassvtkn pdnhnynswa assffafvvt scyagntyfs fiswrsrtlq
//
LOCUS       XP_041322772             174 aa            linear   VRT 06-MAY-2021
DEFINITION  CKLF-like MARVEL transmembrane domain-containing protein 8 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322772
VERSION     XP_041322772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="CKLF-like MARVEL transmembrane domain-containing
                     protein 8 isoform X2"
                     /calculated_mol_wt=19470
     Region          43..163
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..174
                     /gene="CMTM8"
                     /coded_by="XM_041466838.1:85..609"
                     /db_xref="GeneID:121353201"
ORIGIN      
        1 meppvppqeq pprprshtvt ttsssftanl sassstlayd reflrtvpgl lmvteivlgl
       61 lvwtliagte yflypafgwv mfvavfywvl tvffliiymt mtytripqgl cfngsafvly
      121 liaaivdass vtknpdnhny nswaassffa fvvtscyagn tyfsfiswrs rtlq
//
LOCUS       XP_041322773             481 aa            linear   VRT 06-MAY-2021
DEFINITION  metalloreductase STEAP1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322773
VERSION     XP_041322773.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466839.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="metalloreductase STEAP1"
                     /calculated_mol_wt=53446
     Region          <9..>105
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..481
                     /gene="STEAP1"
                     /coded_by="XM_041466839.1:172..1617"
                     /db_xref="GeneID:121353203"
ORIGIN      
        1 mrplsgrgps rptagrslgr pvtegsplre aapsrrppll grgtaprlap agrrapgwar
       61 kagpagevea aaglprlsss qspagapllt rgrlplraal pgaaprgrsr agaaaaaapr
      121 ggtcggkerp gcraegvstm ekreggnhai dqnagqnimp rrntgnlnhl nvdmqvasps
      181 eaaalfdlhq ahhfgefehs seqhckqdlf pkwhlpmkia svislltfiy tsmrdviypf
      241 vtkkenvfyk ipilvinkvl pvtsitllal vylpgilaas fqlyfgtkyk rfpqwldrwm
      301 vsrkqfglls fffatlhacy slcypmrrsy rykllnwafq qvkqkkenaw iehdvwrmei
      361 yvslgilgla llallaitsi psvslsltwr efhyiqskmg ylalllctvh alvfawnkwv
      421 danqfiwytp psfmvavflp ivvllckcil llpcfrkrir kirsgweakt hanqtsitsr
      481 l
//
LOCUS       XP_041322774            1087 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking kinesin-binding protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322774
VERSION     XP_041322774.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466840.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1087
                     /product="trafficking kinesin-binding protein 1 isoform
                     X1"
                     /calculated_mol_wt=120670
     Region          144..449
                     /region_name="HAP1_N"
                     /note="HAP1 N-terminal conserved region; pfam04849"
                     /db_xref="CDD:461455"
     Region          510..679
                     /region_name="Milton"
                     /note="Kinesin associated protein; pfam12448"
                     /db_xref="CDD:463588"
     CDS             1..1087
                     /gene="TRAK1"
                     /coded_by="XM_041466840.1:40..3303"
                     /db_xref="GeneID:121353204"
ORIGIN      
        1 mvrfwwgkgd trkeecfedd qeqkefktrl leanssedke fhlcqpapvs sagppdgtly
       61 kpvkpaklda talhdctlaa tvppselsnh avlacdtgih eehyvsegve ddvpdcreyr
      121 dactitdvcn stnlpeveii slleeqlphy klradtiygy dhddwlhtpl ispdanidlt
      181 teqieetlky fllcaervgq mtktyndida vtrlleeker dlelaarigq sllkknkslt
      241 erndfleeqv ehireevsql rhelsmkdel lqfytsaaee sepesvcstp lkrnessssv
      301 qnyfhldslq kklkdleeen vvlrseacql ktetityeek eqqlvndcvk elrdaniqia
      361 niseelakkt edaarqqeei thllsqivel qkkakacave neelvqhlga akdaqrqlta
      421 elreledkya ecmemlheaq eelknlrnkt mpnaisrryh slglfpmdsl aaeiegsmrk
      481 elhldepdsp dlahqkrvfe tvrnvnqvvk qrsmtpspmn ipgsnqssam nsvisscvst
      541 prssfyggdi snimidnktn siiletessd ngnedrmkkp gtpgtpgssd letalrrlsl
      601 rrenylserk ffeeeqerkl relaekgelh sgsvtptesi mslgthsrfs eftgysgmsi
      661 ssrsylpekl qivkplegsa tlhhwqqlaq phlggildpr pgvvtkgfrt ldldldevyc
      721 lndyeedetg disykgltts tpvqhtetsg ersqaqvtvs enknnprqsq afteemqesa
      781 tdddegsvph pgkcmsqtns tftfttcril hpsdeltrvt pslnaaptpa cgsisnlkgt
      841 pvatpctprr lslaesftnl restttmsts lglvwllker gisaavynpq swdrasrstl
      901 lntyspkmai ipstppnspm qtpsssppsf efkctsppyd nflaskpass ilkevrnkkn
      961 irnsesqtdv svsnlnlvdk vrrfgiakvv ssgqtsaapl tndqgpllcg aqgpvralvp
     1021 gglapdglpl gcpavtsaig giqlntgirr nrsfptmvgs smqmkgptsl tsgilmgtkl
     1081 pkqtslr
//
LOCUS       XP_041322775            1049 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking kinesin-binding protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322775
VERSION     XP_041322775.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466841.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1049
                     /product="trafficking kinesin-binding protein 1 isoform
                     X2"
                     /calculated_mol_wt=116486
     Region          144..449
                     /region_name="HAP1_N"
                     /note="HAP1 N-terminal conserved region; pfam04849"
                     /db_xref="CDD:461455"
     Region          510..679
                     /region_name="Milton"
                     /note="Kinesin associated protein; pfam12448"
                     /db_xref="CDD:463588"
     CDS             1..1049
                     /gene="TRAK1"
                     /coded_by="XM_041466841.1:40..3189"
                     /db_xref="GeneID:121353204"
ORIGIN      
        1 mvrfwwgkgd trkeecfedd qeqkefktrl leanssedke fhlcqpapvs sagppdgtly
       61 kpvkpaklda talhdctlaa tvppselsnh avlacdtgih eehyvsegve ddvpdcreyr
      121 dactitdvcn stnlpeveii slleeqlphy klradtiygy dhddwlhtpl ispdanidlt
      181 teqieetlky fllcaervgq mtktyndida vtrlleeker dlelaarigq sllkknkslt
      241 erndfleeqv ehireevsql rhelsmkdel lqfytsaaee sepesvcstp lkrnessssv
      301 qnyfhldslq kklkdleeen vvlrseacql ktetityeek eqqlvndcvk elrdaniqia
      361 niseelakkt edaarqqeei thllsqivel qkkakacave neelvqhlga akdaqrqlta
      421 elreledkya ecmemlheaq eelknlrnkt mpnaisrryh slglfpmdsl aaeiegsmrk
      481 elhldepdsp dlahqkrvfe tvrnvnqvvk qrsmtpspmn ipgsnqssam nsvisscvst
      541 prssfyggdi snimidnktn siiletessd ngnedrmkkp gtpgtpgssd letalrrlsl
      601 rrenylserk ffeeeqerkl relaekgelh sgsvtptesi mslgthsrfs eftgysgmsi
      661 ssrsylpekl qivkplegsa tlhhwqqlaq phlggildpr pgvvtkgfrt ldldldevyc
      721 lndyeedetg disykgltts tpvqhtetsv phpgkcmsqt nstftfttcr ilhpsdeltr
      781 vtpslnaapt pacgsisnlk gtpvatpctp rrlslaesft nlrestttms tslglvwllk
      841 ergisaavyn pqswdrasrs tllntyspkm aiipstppns pmqtpssspp sfefkctspp
      901 ydnflaskpa ssilkevrnk knirnsesqt dvsvsnlnlv dkvrrfgiak vvssgqtsaa
      961 pltndqgpll cgaqgpvral vpgglapdgl plgcpavtsa iggiqlntgi rrnrsfptmv
     1021 gssmqmkgpt sltsgilmgt klpkqtslr
//
LOCUS       XP_041322776             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322776
VERSION     XP_041322776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466842.1:574..3126"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322777             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322777
VERSION     XP_041322777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466843.1:539..3091"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322779             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322779
VERSION     XP_041322779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466845.1:429..2981"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322780             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322780
VERSION     XP_041322780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466846.1:480..3032"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322781             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322781
VERSION     XP_041322781.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466847.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466847.1:559..3111"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322782             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322782
VERSION     XP_041322782.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466848.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466848.1:300..2852"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322783             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322783
VERSION     XP_041322783.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466849.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466849.1:344..2896"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322784             850 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322784
VERSION     XP_041322784.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466850.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="cAMP-regulated phosphoprotein 21 isoform X1"
                     /calculated_mol_wt=93813
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <566..790
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..850
                     /gene="ARPP21"
                     /coded_by="XM_041466850.1:231..2783"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqvpmtq gsqglpqqsy
      781 qqpimlpnqs gqgtltatgm pvycnvippa pqnnlrliap hcpsnnvpvi sascrtncas
      841 innagwqvky
//
LOCUS       XP_041322785             849 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322785
VERSION     XP_041322785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..849
                     /product="cAMP-regulated phosphoprotein 21 isoform X2"
                     /calculated_mol_wt=93726
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <565..789
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..849
                     /gene="ARPP21"
                     /coded_by="XM_041466851.1:574..3123"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgses
      421 sssagssgsl srihqplqsa slipgvtass sgsvsypeng msgqvapsnt syiilpleaa
      481 gippgsilln phtgqpfvnp dgtpaiynpp sgqqtmrsqv vgqsqqqpsp qqpqqvqqpq
      541 qqmashlvtq pvqtmqpssq svqypavsyp pqhllpvspt qqfsvrddmt aqfnqmslsr
      601 qssgdnpesp sgpvypspil qqpaqqtgyi maspsqqlpp ggftgsgapv sqqvlqpppq
      661 gfvqqppppa qmpvyyypsg qyptsttqqy rpiasvqyna qrsqqipqta qqagyqpvlp
      721 nqqqgfqglm gmqqppqsqn lmnnqqgnqv qgmmvqypam ssyqvpmtqg sqglpqqsyq
      781 qpimlpnqsg qgtltatgmp vycnvippap qnnlrliaph cpsnnvpvis ascrtncasi
      841 nnagwqvky
//
LOCUS       XP_041322786             849 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322786
VERSION     XP_041322786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..849
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..849
                     /product="cAMP-regulated phosphoprotein 21 isoform X3"
                     /calculated_mol_wt=93726
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <565..789
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..849
                     /gene="ARPP21"
                     /coded_by="XM_041466852.1:575..3124"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvenr lledssicnd mhkkrqlfrg nrdsigktsg srqsstenel
      361 kwadhqrpws stdsdssnrn lkpaitktas fggitvltrg dssssnrstg klsktgsses
      421 sssagssgsl srihqplqsa slipgvtass sgsvsypeng msgqvapsnt syiilpleaa
      481 gippgsilln phtgqpfvnp dgtpaiynpp sgqqtmrsqv vgqsqqqpsp qqpqqvqqpq
      541 qqmashlvtq pvqtmqpssq svqypavsyp pqhllpvspt qqfsvrddmt aqfnqmslsr
      601 qssgdnpesp sgpvypspil qqpaqqtgyi maspsqqlpp ggftgsgapv sqqvlqpppq
      661 gfvqqppppa qmpvyyypsg qyptsttqqy rpiasvqyna qrsqqipqta qqagyqpvlp
      721 nqqqgfqglm gmqqppqsqn lmnnqqgnqv qgmmvqypam ssyqvpmtqg sqglpqqsyq
      781 qpimlpnqsg qgtltatgmp vycnvippap qnnlrliaph cpsnnvpvis ascrtncasi
      841 nnagwqvky
//
LOCUS       XP_041322787             848 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322787
VERSION     XP_041322787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..848
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..848
                     /product="cAMP-regulated phosphoprotein 21 isoform X4"
                     /calculated_mol_wt=93639
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <564..788
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..848
                     /gene="ARPP21"
                     /coded_by="XM_041466853.1:574..3120"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvenr lledssicnd mhkkrqlfrg nrdsigktsg srqsstenel
      361 kwadhqrpws stdsdssnrn lkpaitktas fggitvltrg dssssnrstg klsktgsess
      421 ssagssgsls rihqplqsas lipgvtasss gsvsypengm sgqvapsnts yiilpleaag
      481 ippgsillnp htgqpfvnpd gtpaiynpps gqqtmrsqvv gqsqqqpspq qpqqvqqpqq
      541 qmashlvtqp vqtmqpssqs vqypavsypp qhllpvsptq qfsvrddmta qfnqmslsrq
      601 ssgdnpesps gpvypspilq qpaqqtgyim aspsqqlppg gftgsgapvs qqvlqpppqg
      661 fvqqppppaq mpvyyypsgq yptsttqqyr piasvqynaq rsqqipqtaq qagyqpvlpn
      721 qqqgfqglmg mqqppqsqnl mnnqqgnqvq gmmvqypams syqvpmtqgs qglpqqsyqq
      781 pimlpnqsgq gtltatgmpv ycnvippapq nnlrliaphc psnnvpvisa scrtncasin
      841 nagwqvky
//
LOCUS       XP_041322788             816 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322788
VERSION     XP_041322788.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466854.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..816
                     /product="cAMP-regulated phosphoprotein 21 isoform X5"
                     /calculated_mol_wt=89466
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          <532..756
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..816
                     /gene="ARPP21"
                     /coded_by="XM_041466854.1:573..3023"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqsvcsqen lfvensrlle dssicndmhk
      301 krqlfrgnrd sigktsgsrq sstenelkwa dhqrpwsstd sdssnrnlkp aitktasfgg
      361 itvltrgdss ssnrstgkls ktgssessss agssgslsri hqplqsasli pgvtasssgs
      421 vsypengmsg qvapsntsyi ilpleaagip pgsillnpht gqpfvnpdgt paiynppsgq
      481 qtmrsqvvgq sqqqpspqqp qqvqqpqqqm ashlvtqpvq tmqpssqsvq ypavsyppqh
      541 llpvsptqqf svrddmtaqf nqmslsrqss gdnpespsgp vypspilqqp aqqtgyimas
      601 psqqlppggf tgsgapvsqq vlqpppqgfv qqppppaqmp vyyypsgqyp tsttqqyrpi
      661 asvqynaqrs qqipqtaqqa gyqpvlpnqq qgfqglmgmq qppqsqnlmn nqqgnqvqgm
      721 mvqypamssy qvpmtqgsqg lpqqsyqqpi mlpnqsgqgt ltatgmpvyc nvippapqnn
      781 lrliaphcps nnvpvisasc rtncasinna gwqvky
//
LOCUS       XP_041322790             815 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322790
VERSION     XP_041322790.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466856.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="cAMP-regulated phosphoprotein 21 isoform X6"
                     /calculated_mol_wt=89378
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          <531..755
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..815
                     /gene="ARPP21"
                     /coded_by="XM_041466856.1:572..3019"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqsvcsqen lfvensrlle dssicndmhk
      301 krqlfrgnrd sigktsgsrq sstenelkwa dhqrpwsstd sdssnrnlkp aitktasfgg
      361 itvltrgdss ssnrstgkls ktgsessssa gssgslsrih qplqsaslip gvtasssgsv
      421 sypengmsgq vapsntsyii lpleaagipp gsillnphtg qpfvnpdgtp aiynppsgqq
      481 tmrsqvvgqs qqqpspqqpq qvqqpqqqma shlvtqpvqt mqpssqsvqy pavsyppqhl
      541 lpvsptqqfs vrddmtaqfn qmslsrqssg dnpespsgpv ypspilqqpa qqtgyimasp
      601 sqqlppggft gsgapvsqqv lqpppqgfvq qppppaqmpv yyypsgqypt sttqqyrpia
      661 svqynaqrsq qipqtaqqag yqpvlpnqqq gfqglmgmqq ppqsqnlmnn qqgnqvqgmm
      721 vqypamssyq vpmtqgsqgl pqqsyqqpim lpnqsgqgtl tatgmpvycn vippapqnnl
      781 rliaphcpsn nvpvisascr tncasinnag wqvky
//
LOCUS       XP_041322791             815 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322791
VERSION     XP_041322791.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466857.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="cAMP-regulated phosphoprotein 21 isoform X7"
                     /calculated_mol_wt=89378
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          <531..755
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..815
                     /gene="ARPP21"
                     /coded_by="XM_041466857.1:573..3020"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqsvcsqen lfvenrlled ssicndmhkk
      301 rqlfrgnrds igktsgsrqs stenelkwad hqrpwsstds dssnrnlkpa itktasfggi
      361 tvltrgdsss snrstgklsk tgssessssa gssgslsrih qplqsaslip gvtasssgsv
      421 sypengmsgq vapsntsyii lpleaagipp gsillnphtg qpfvnpdgtp aiynppsgqq
      481 tmrsqvvgqs qqqpspqqpq qvqqpqqqma shlvtqpvqt mqpssqsvqy pavsyppqhl
      541 lpvsptqqfs vrddmtaqfn qmslsrqssg dnpespsgpv ypspilqqpa qqtgyimasp
      601 sqqlppggft gsgapvsqqv lqpppqgfvq qppppaqmpv yyypsgqypt sttqqyrpia
      661 svqynaqrsq qipqtaqqag yqpvlpnqqq gfqglmgmqq ppqsqnlmnn qqgnqvqgmm
      721 vqypamssyq vpmtqgsqgl pqqsyqqpim lpnqsgqgtl tatgmpvycn vippapqnnl
      781 rliaphcpsn nvpvisascr tncasinnag wqvky
//
LOCUS       XP_041322792             814 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322792
VERSION     XP_041322792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..814
                     /product="cAMP-regulated phosphoprotein 21 isoform X8"
                     /calculated_mol_wt=89291
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          <530..754
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..814
                     /gene="ARPP21"
                     /coded_by="XM_041466858.1:573..3017"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqsvcsqen lfvenrlled ssicndmhkk
      301 rqlfrgnrds igktsgsrqs stenelkwad hqrpwsstds dssnrnlkpa itktasfggi
      361 tvltrgdsss snrstgklsk tgsessssag ssgslsrihq plqsaslipg vtasssgsvs
      421 ypengmsgqv apsntsyiil pleaagippg sillnphtgq pfvnpdgtpa iynppsgqqt
      481 mrsqvvgqsq qqpspqqpqq vqqpqqqmas hlvtqpvqtm qpssqsvqyp avsyppqhll
      541 pvsptqqfsv rddmtaqfnq mslsrqssgd npespsgpvy pspilqqpaq qtgyimasps
      601 qqlppggftg sgapvsqqvl qpppqgfvqq ppppaqmpvy yypsgqypts ttqqyrpias
      661 vqynaqrsqq ipqtaqqagy qpvlpnqqqg fqglmgmqqp pqsqnlmnnq qgnqvqgmmv
      721 qypamssyqv pmtqgsqglp qqsyqqpiml pnqsgqgtlt atgmpvycnv ippapqnnlr
      781 liaphcpsnn vpvisascrt ncasinnagw qvky
//
LOCUS       XP_041322793             778 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322793
VERSION     XP_041322793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..778
                     /product="cAMP-regulated phosphoprotein 21 isoform X9"
                     /calculated_mol_wt=86094
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <436..>734
                     /region_name="PHA03379"
                     /note="EBNA-3A; Provisional"
                     /db_xref="CDD:223066"
     CDS             1..778
                     /gene="ARPP21"
                     /coded_by="XM_041466859.1:581..2917"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgsse
      421 ssssagssgs lsrihqplqs aslipgvtas ssgsvsypen gmsgqvapsn tsyiilplea
      481 agippgsill nphtgqpfvn pdgtpaiynp psgqqtmrsq vvgqsqqqps pqqpqqvqqp
      541 qqqmashlvt qpvqtmqpss qsvqypavsy ppqhllpvsp tqqfsvrddm taqfnqmsls
      601 rqssgdnpes psgpvypspi lqqpaqqtgy imaspsqqlp pggftgsgap vsqqvlqppp
      661 qgfvqqpppp aqmpvyyyps gqyptsttqq yrpiasvqyn aqrsqqipqt aqqagyqpvl
      721 pnqqqgfqgl mgmqqppqsq nlmnnqqgnq vqgmmvqypa mssyqcstvs cnevegfa
//
LOCUS       XP_041322794             772 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322794
VERSION     XP_041322794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466860.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="cAMP-regulated phosphoprotein 21 isoform X10"
                     /calculated_mol_wt=86194
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          253..308
                     /region_name="SUZ"
                     /note="SUZ domain; pfam12752"
                     /db_xref="CDD:463689"
     Region          <488..712
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..772
                     /gene="ARPP21"
                     /coded_by="XM_041466860.1:576..2894"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntripeq
      241 rfsehlkdek geesqkrfil krdnssidke dnqqnrilpf rddrrsksie ereeeyqrvr
      301 erifaqdsvc sqenlfvens rlledssicn dmhkkrqlfr gnrdsigkts gsrqsstene
      361 lkwadhqrpw sstdsdssnr nlkpaitkta sfggitvltr gdssssnrst gklsktgqpf
      421 vnpdgtpaiy nppsgqqtmr sqvvgqsqqq pspqqpqqvq qpqqqmashl vtqpvqtmqp
      481 ssqsvqypav syppqhllpv sptqqfsvrd dmtaqfnqms lsrqssgdnp espsgpvyps
      541 pilqqpaqqt gyimaspsqq lppggftgsg apvsqqvlqp ppqgfvqqpp ppaqmpvyyy
      601 psgqyptstt qqyrpiasvq ynaqrsqqip qtaqqagyqp vlpnqqqgfq glmgmqqppq
      661 sqnlmnnqqg nqvqgmmvqy pamssyqvpm tqgsqglpqq syqqpimlpn qsgqgtltat
      721 gmpvycnvip papqnnlrli aphcpsnnvp visascrtnc asinnagwqv ky
//
LOCUS       XP_041322795             767 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 21 isoform X11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322795
VERSION     XP_041322795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..767
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..767
                     /product="cAMP-regulated phosphoprotein 21 isoform X11"
                     /calculated_mol_wt=83684
     Region          171..232
                     /region_name="R3H_encore_like"
                     /note="R3H domain of encore-like and DIP1-like proteins.
                     Drosophila encore is involved in the germline exit after
                     four mitotic divisions, by facilitating
                     SCF-ubiquitin-proteasome-dependent proteolysis. Maize
                     DBF1-interactor protein 1 (DIP1) containing an R3H...;
                     cd02642"
                     /db_xref="CDD:100071"
     Site            order(204,208)
                     /site_type="other"
                     /note="RxxxH motif"
                     /db_xref="CDD:100071"
     Region          <483..707
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..767
                     /gene="ARPP21"
                     /coded_by="XM_041466861.1:572..2875"
                     /db_xref="GeneID:121353205"
ORIGIN      
        1 mseqgklnqe taeeaakeqe taiseanpdn cvlnksesse veeeklsdsk telqkrganq
       61 kkrsksgakg klvrslavce essprpgaen lhdnqesiql qlssfpslqe edksskddse
      121 kekekdknkd knsekskirm lskdcsqeyt dstgidlhef lintlknnpr drmillkmeq
      181 eiidfigdnn nhykkfpqms syqrmlvhrv aayfgmdhnv dqtgksviin ktsntrirll
      241 edssicndmh kkrqlfrgnr dsigktsgsr qsstenelkw adhqrpwsst dsdssnrnlk
      301 paitktasfg gitvltrgds sssnrstgkl sktgssesss sagssgslsr ihqplqsasl
      361 ipgvtasssg svsypengms gqvapsntsy iilpleaagi ppgsillnph tgqpfvnpdg
      421 tpaiynppsg qqtmrsqvvg qsqqqpspqq pqqvqqpqqq mashlvtqpv qtmqpssqsv
      481 qypavsyppq hllpvsptqq fsvrddmtaq fnqmslsrqs sgdnpespsg pvypspilqq
      541 paqqtgyima spsqqlppgg ftgsgapvsq qvlqpppqgf vqqppppaqm pvyyypsgqy
      601 ptsttqqyrp iasvqynaqr sqqipqtaqq agyqpvlpnq qqgfqglmgm qqppqsqnlm
      661 nnqqgnqvqg mmvqypamss yqvpmtqgsq glpqqsyqqp imlpnqsgqg tltatgmpvy
      721 cnvippapqn nlrliaphcp snnvpvisas crtncasinn agwqvky
//
LOCUS       XP_041322796             220 aa            linear   VRT 06-MAY-2021
DEFINITION  mammalian ependymin-related protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322796
VERSION     XP_041322796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..220
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..220
                     /product="mammalian ependymin-related protein 1"
                     /calculated_mol_wt=24627
     Region          85..208
                     /region_name="Ependymin"
                     /note="pfam00811"
                     /db_xref="CDD:459946"
     CDS             1..220
                     /gene="EPDR1"
                     /coded_by="XM_041466862.1:75..737"
                     /db_xref="GeneID:121353206"
ORIGIN      
        1 marpgagqql rpgpgpplrl llllgvlllr ggaaggaepc qaprqwegrt vfyehgsgrn
       61 traavsydgp nqrlrileer kalipckkff eyillykdav mfqieqvtkl cskialtepw
      121 dpydipanst yedqyyiggp gdevmvqews drkparkles wvgvytvkdc ypvqetytkn
      181 ysvttstrff dihlgiadps vftppstcqa aqltrmkdec
//
LOCUS       XP_041322798             419 aa            linear   VRT 06-MAY-2021
DEFINITION  pyruvate dehydrogenase kinase, isozyme 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322798
VERSION     XP_041322798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="pyruvate dehydrogenase kinase, isozyme 4"
                     /calculated_mol_wt=46795
     Region          40..202
                     /region_name="BCDHK_Adom3"
                     /note="Mitochondrial branched-chain alpha-ketoacid
                     dehydrogenase kinase; pfam10436"
                     /db_xref="CDD:463093"
     Region          206..372
                     /region_name="HATPase_PDK-like"
                     /note="Histidine kinase-like ATPase domain of pyruvate
                     dehydrogenase kinase, branched-chain alpha-ketoacid
                     dehydrogenase kinase and related domains; cd16929"
                     /db_xref="CDD:340406"
     Site            order(235,286,288,290..293,295..297,301,306..308,357,
                     359..363,366,370)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340406"
     Site            order(261,265..266,268..269,298,300,302,304..305,313,
                     335..342,358,360,364..365,367)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340406"
     Site            order(314,341)
                     /site_type="other"
                     /note="ATP-lid"
                     /db_xref="CDD:340406"
     CDS             1..419
                     /gene="PDK4"
                     /coded_by="XM_041466864.1:101..1360"
                     /db_xref="GeneID:121353208"
ORIGIN      
        1 mkaarialrn aaplagasag sssgrlpqev eqfsrfspsp lsikqlldfg stngcertsf
       61 aflrqelpvr fanilkeidl lpdkllgtps vklvrswyiq slkeliefhq kspddqkvls
      121 dfidtlirvr nrhhdvvptm aqgvieykdt fkvdpvtnqn iqyfldrfym sristrmlmn
      181 qhtllfddks gsghprhigs idpccdvvev vndayesakm lcdqyyltsp elkltqvngk
      241 apgepisivy vpshlfhmlf elfknsmrat vefqensptl spvevtvvlg kedlaikiad
      301 rgggvpvrki erlfsymyst aprpnvddar ntplagfgyg lpisrlyaky fqgdlnlysi
      361 cgygtdaiiy lkalstesie klpvfnksas khyqatsead dwcvpskdpk nmakqsaas
//
LOCUS       XP_041322799             120 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich protein 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041322799
VERSION     XP_041322799.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466865.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..120
                     /product="proline-rich protein 15"
                     /calculated_mol_wt=12070
     Region          22..99
                     /region_name="ATAD4"
                     /note="ATPase family AAA domain containing 4; pfam15321"
                     /db_xref="CDD:464644"
     CDS             1..120
                     /gene="PRR15"
                     /coded_by="XM_041466865.1:1..363"
                     /db_xref="GeneID:121353209"
ORIGIN      
        1 madsaaataa pragvkgsag pwwksltskk khkeaavspp hpvasetpad tpspdgreeq
       61 paplgsgdaa gagvgnrrsl rvshsgrfke rrkvrtslla dspevfdggg apghatqgae
//
LOCUS       XP_041322800             413 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322800
VERSION     XP_041322800.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466866.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="homeobox protein Hox-A3"
                     /calculated_mol_wt=44750
     Region          118..248
                     /region_name="COG5576"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]"
                     /db_xref="CDD:227863"
     Region          174..230
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          349..411
                     /region_name="DUF4074"
                     /note="Domain of unknown function (DUF4074); pfam13293"
                     /db_xref="CDD:463833"
     CDS             1..413
                     /gene="HOXA3"
                     /coded_by="XM_041466866.1:251..1492"
                     /db_xref="GeneID:121353210"
ORIGIN      
        1 mqkatyydss aiygaypyqg angftynasq qqyppssslv eteyhrpacs lqspgssvsh
       61 hkandisesc mrtlpsqtlq ppsladpqap pqpppaqqsq pppptstspp qnassnpapa
      121 nptkspalns ptvskqifpw mkesrqntkq knsssssges cagdksppgq asskrartay
      181 tsaqlvelek efhfnrylcr prrvemanll nlterqikiw fqnrrmkykk dqkgkgmmts
      241 sggqspsrsp vppaaggyln smhslvnsvp yepqspppfn kphqntygip asytaplnnc
      301 pppqkrytgt aavtpeydth plqgngygnp hiqgspvyvg gnyvetmtns gpsifglthl
      361 phppsanmdy sgagpmannh hhgpcdphpt ytdltahhps qgriqeapkl thl
//
LOCUS       XP_041322801             378 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322801
VERSION     XP_041322801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="homeobox protein Hox-A2"
                     /calculated_mol_wt=41411
     Region          141..197
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..378
                     /gene="HOXA2"
                     /coded_by="XM_041466867.1:457..1593"
                     /db_xref="GeneID:121353211"
ORIGIN      
        1 mnfafereig finsqpslae cltsfppvgd tfqsssikns tlshstlipp pfeqtipsln
       61 pgshprhsgg grpkasprgr sgspgpagap pppeypwmke kkaskrsalp pasasasaag
      121 paclshkdpl eipdsgsggs rrlrtaytnt qllelekefh fnkylcrprr veiaalldlt
      181 erqvkvwfqn rrmkhkrqtq ckenqnsegk fknledpeka vdeeeeeeee kslfeqalsn
      241 vsgallereg yafqqnalsq qqaqnahnge sqtfpvsplt sneknlkhfq hqsptvqncl
      301 stmaqncaag lnndspeald vpslqdfnvf stdsclqlsd avspslpgsl dspvdisads
      361 fdfftdtltt idlqhlny
//
LOCUS       XP_041322802             324 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322802
VERSION     XP_041322802.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466868.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="homeobox protein Hox-A1"
                     /calculated_mol_wt=34271
     Region          222..275
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..324
                     /gene="HOXA1"
                     /coded_by="XM_041466868.1:107..1081"
                     /db_xref="GeneID:121353212"
ORIGIN      
        1 mssfleypvl ggeaggcaar ayhpdhgitt fqpcavsags csgedrflag rgvpisphrh
       61 hhhspaqpaa yqhhgglgvs yahpgcgpty saqgfgaayg pyplgqdael gggfppcapa
      121 vysgsisssa aaqhplphqg yagasaqyvp ppygqeqqsl plgtynhals plhaghrena
      181 cspssetspp aqtfdwmkvk rnppktgkag eygfvgqpnt vrtnfttkql telekefhfn
      241 kyltrarrve iaaslqlnet qvkiwfqnrr mkqkkrekeg llpispatpt gceekaedss
      301 ekscsspcsa spassasdtl aasn
//
LOCUS       XP_041322803             304 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322803
VERSION     XP_041322803.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466869.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..304
                     /product="homeobox protein Hox-A4"
                     /calculated_mol_wt=32975
     Region          206..262
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..304
                     /gene="HOXA4"
                     /coded_by="XM_041466869.1:91..1005"
                     /db_xref="GeneID:121353213"
ORIGIN      
        1 mtmssflins nyiepkfppc eeytqhsgsa gssasyhphh shphappppp ppphlhaahp
       61 gpalpeyfpr prrepgyqap aappgppgpp pealypaqap sypqapysyn sagsaapgpe
      121 qpppgasppp pakghpgppq pllpghalqr rceaapaaga gtgpacallp dkslpglkgk
      181 epvvypwmkk ihvstvnpny nggepkrsrt aytrqqvlel ekefhfnryl trrrrieiah
      241 tlclserqvk iwfqnrrmkw kkdhklpntk mrssnqstls qqskaqtqgh phpldgatpn
      301 aaal
//
LOCUS       XP_041322804             274 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322804
VERSION     XP_041322804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="homeobox protein Hox-A6 isoform X1"
                     /calculated_mol_wt=30444
     CDS             1..274
                     /gene="HOXA6"
                     /coded_by="XM_041466870.1:199..1023"
                     /db_xref="GeneID:121353214"
ORIGIN      
        1 mssyfvnptf pgslpggqds flgqiplypa gydalrhfpa sygasslqdk tytspcfyqq
       61 sntviacsra syeygascfy sdkdissasp sgsgkqrgpg dylhfspdqq yktsggqaki
      121 indegtdrky tspvypwmqr mnscagyvcl laiqivrfrd rsiqttssqy yvkngslqvk
      181 avlkgillek svktqriflg ekkkvvmckd taswlspkkm yillleielr takypmadyh
      241 rlreprneaa rpgrwkklga pqpnpaqlee vgsg
//
LOCUS       XP_041322805             231 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322805
VERSION     XP_041322805.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466871.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..231
                     /product="homeobox protein Hox-A6 isoform X2"
                     /calculated_mol_wt=26266
     Region          154..210
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..231
                     /gene="HOXA6"
                     /coded_by="XM_041466871.1:199..894"
                     /db_xref="GeneID:121353214"
ORIGIN      
        1 mssyfvnptf pgslpggqds flgqiplypa gydalrhfpa sygasslqdk tytspcfyqq
       61 sntviacsra syeygascfy sdkdissasp sgsgkqrgpg dylhfspdqq yktsggqaki
      121 indegtdrky tspvypwmqr mnscagtvyg thgrrgrqty tryqtlelek efhfnryltr
      181 rrrieianal clterqikiw fqnrrmkwkk enkfinstqp sseeteeksg e
//
LOCUS       XP_041322806             208 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A6 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322806
VERSION     XP_041322806.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466872.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="homeobox protein Hox-A6 isoform X3"
                     /calculated_mol_wt=22908
     CDS             1..208
                     /gene="HOXA6"
                     /coded_by="XM_041466872.1:199..825"
                     /db_xref="GeneID:121353214"
ORIGIN      
        1 mssyfvnptf pgslpggqds flgqiplypa gydalrhfpa sygasslqdk tytspcfyqq
       61 sntviacsra syeygascfy sdkdissasp sgsgkqrgpg dylhfspdqq yktsggqaki
      121 indegtdrky tspvypwmqr mnscagyvcl laiqivrfrd rsiqttssqy yvkngslqvk
      181 gspetkplgr gggrswerls ptlrswrr
//
LOCUS       XP_041322807             270 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322807
VERSION     XP_041322807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="homeobox protein Hox-A5"
                     /calculated_mol_wt=29802
     Region          196..252
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..270
                     /gene="HOXA5"
                     /coded_by="XM_041466873.1:248..1060"
                     /db_xref="GeneID:121353216"
ORIGIN      
        1 mssyfvnsfc grypngpdyq lhnygdhssv seqyrdsasm hsgrygygyn gmdlsvgrsa
       61 sthfganerp rsypanttsa steprynqpa tsshspppdp lpctavagsp vseshhgvkn
      121 slanststss nsssnthisr dgvgtssgte edtpasseqa saptdqstaq psqpqiypwm
      181 rklhishdni ggpegkrart aytryqtlel ekefhfnryl trrrrieiah alclserqik
      241 iwfqnrrmkw kkdnklksms maaaggafrp
//
LOCUS       XP_041322808             219 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Hox-A7 [Pyrgilauda ruficollis].
ACCESSION   XP_041322808
VERSION     XP_041322808.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466874.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="homeobox protein Hox-A7"
                     /calculated_mol_wt=24862
     Region          130..186
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..219
                     /gene="HOXA7"
                     /coded_by="XM_041466874.1:129..788"
                     /db_xref="GeneID:121353217"
ORIGIN      
        1 msssyyvnal fskytagasl fqnaeptscs fasnsqrsgy gpgagafass mpglynvnst
       61 iyqspfssgy slgsdaynlh cssfdqnipv lcneltkpsc ekaeesnlhn qaepnfriyp
      121 wmrssgpdrk rgrqtytryq tlelekefhf nryltrrrri eiahalclte rqikiwfqnr
      181 rmkwkkehke essstpapne ptsaaasvek veedeeeed
//
LOCUS       XP_041322810             108 aa            linear   VRT 06-MAY-2021
DEFINITION  prolactin-releasing peptide [Pyrgilauda ruficollis].
ACCESSION   XP_041322810
VERSION     XP_041322810.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466876.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..108
                     /product="prolactin-releasing peptide"
                     /calculated_mol_wt=12568
     Region          40..>73
                     /region_name="Prolactin_RP"
                     /note="Prolactin-releasing peptide; pfam15172"
                     /db_xref="CDD:434514"
     CDS             1..108
                     /gene="PRLH"
                     /coded_by="XM_041466876.1:1..327"
                     /db_xref="GeneID:121353219"
ORIGIN      
        1 mwhpiswtpr aqwspnhlkl vtvyvlmllv slsfasgqsr pfkhqidnrs peidpfwyvg
       61 rgvrpigrfg krqlrssrgs ltpvsrhldf ilnalweqks ldtedrdw
//
LOCUS       XP_041322812            1199 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type-III domain-containing protein 3A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322812
VERSION     XP_041322812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1199
                     /product="fibronectin type-III domain-containing protein
                     3A isoform X1"
                     /calculated_mol_wt=131549
     Region          <288..>604
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          466..>887
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <823..>1063
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <1008..>1176
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1199
                     /gene="FNDC3A"
                     /coded_by="XM_041466878.1:121..3720"
                     /db_xref="GeneID:121353230"
ORIGIN      
        1 mmaehpplld ttsiisseip lltspivsgd gaqqvilvqv npgeaftirr edgqfqcitg
       61 paqvpmmspn gsvptiyvpp gyapqviedn gvrrvvvvpq apefhpgght vihrpphppl
      121 pgflplpami pppprhiysp vtgagdmatq yipqyhtsqv ygdvdtlpah grsnfrders
      181 sktyerlqkk lkdrhgtqkd klnsppsspq kcpsptsepn gltkgqdaag istgstkcks
      241 ldkgksnsqt dteveekdee tkaleallsn iakpvvsdiq artallmwsp pssdtgedtd
      301 kndipevyty evmlsstgkd gkyktvyige enkvtvndlr patdyhakvq vecncvkgsp
      361 setesfttas cepdtpnlpr itnrtknslt lqwkascdng skihsyllew degkgngefc
      421 qcyygqqkqy ritklspamg ytfrlaaknd mgmsdfseev lyhtsgtapt tpaspllina
      481 gvtwlslqwt kpsgtpsdeg isyilemede nsgygfkpky dgddltytvk nlrrstkykf
      541 rviaynsegk sspsetveyi tcpdkpgvps kptvkgkiha qsfkiiwdpp kdnggaaiht
      601 yvvemsegls gnkwdtiysg aarehvcdrl npgssyrlrv ycvgeggqst vtdsllvqtp
      661 avvpgpcqpp rlqgrprare iqlrwgppqv dggspitcyg lemfqaesde hrevyqgsdv
      721 ectvgsllpg rmysfrlraa nkagfgpyse kceittapgp pdqckppqvs crsaacaqvs
      781 wevpvsngad vmeyrlewgg vegcmqisyc gpglscevkg llpatiyycr vqavnvagag
      841 pfsevvacmt pasvpavvtc lrglsedeve sphyspstcl aisweepcdh gseilgysid
      901 fgdkqpitvg kdltyfidgl qpdttyrvri qalnslgagp fshtiklktk plppdpprle
      961 caayssqtlk lkwgegtaka ltdsiqyhlq medkngrfvs lyrgpchtyk vqrlsestsy
     1021 kfciqacnea gegplsqeyi fttpksvpaa lkaprierin dhtceitwev lqpmkgdpvi
     1081 yclqvmvgkd sefkqiykgp dwsfrytglq lnceyrfrac airqcqeatg hqdlvgpyst
     1141 pvlfisqrte ppastnkdtv qttrtqwsqs dqvcaavila lfaifsilia viiqyfvik
//
LOCUS       XP_041322813            1199 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type-III domain-containing protein 3A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322813
VERSION     XP_041322813.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466879.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1199
                     /product="fibronectin type-III domain-containing protein
                     3A isoform X1"
                     /calculated_mol_wt=131549
     Region          <288..>604
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          466..>887
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <823..>1063
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <1008..>1176
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1199
                     /gene="FNDC3A"
                     /coded_by="XM_041466879.1:74..3673"
                     /db_xref="GeneID:121353230"
ORIGIN      
        1 mmaehpplld ttsiisseip lltspivsgd gaqqvilvqv npgeaftirr edgqfqcitg
       61 paqvpmmspn gsvptiyvpp gyapqviedn gvrrvvvvpq apefhpgght vihrpphppl
      121 pgflplpami pppprhiysp vtgagdmatq yipqyhtsqv ygdvdtlpah grsnfrders
      181 sktyerlqkk lkdrhgtqkd klnsppsspq kcpsptsepn gltkgqdaag istgstkcks
      241 ldkgksnsqt dteveekdee tkaleallsn iakpvvsdiq artallmwsp pssdtgedtd
      301 kndipevyty evmlsstgkd gkyktvyige enkvtvndlr patdyhakvq vecncvkgsp
      361 setesfttas cepdtpnlpr itnrtknslt lqwkascdng skihsyllew degkgngefc
      421 qcyygqqkqy ritklspamg ytfrlaaknd mgmsdfseev lyhtsgtapt tpaspllina
      481 gvtwlslqwt kpsgtpsdeg isyilemede nsgygfkpky dgddltytvk nlrrstkykf
      541 rviaynsegk sspsetveyi tcpdkpgvps kptvkgkiha qsfkiiwdpp kdnggaaiht
      601 yvvemsegls gnkwdtiysg aarehvcdrl npgssyrlrv ycvgeggqst vtdsllvqtp
      661 avvpgpcqpp rlqgrprare iqlrwgppqv dggspitcyg lemfqaesde hrevyqgsdv
      721 ectvgsllpg rmysfrlraa nkagfgpyse kceittapgp pdqckppqvs crsaacaqvs
      781 wevpvsngad vmeyrlewgg vegcmqisyc gpglscevkg llpatiyycr vqavnvagag
      841 pfsevvacmt pasvpavvtc lrglsedeve sphyspstcl aisweepcdh gseilgysid
      901 fgdkqpitvg kdltyfidgl qpdttyrvri qalnslgagp fshtiklktk plppdpprle
      961 caayssqtlk lkwgegtaka ltdsiqyhlq medkngrfvs lyrgpchtyk vqrlsestsy
     1021 kfciqacnea gegplsqeyi fttpksvpaa lkaprierin dhtceitwev lqpmkgdpvi
     1081 yclqvmvgkd sefkqiykgp dwsfrytglq lnceyrfrac airqcqeatg hqdlvgpyst
     1141 pvlfisqrte ppastnkdtv qttrtqwsqs dqvcaavila lfaifsilia viiqyfvik
//
LOCUS       XP_041322814            1142 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type-III domain-containing protein 3A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322814
VERSION     XP_041322814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1142
                     /product="fibronectin type-III domain-containing protein
                     3A isoform X2"
                     /calculated_mol_wt=125419
     Region          <231..>547
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          409..>830
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <766..>1006
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <951..>1119
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1142
                     /gene="FNDC3A"
                     /coded_by="XM_041466880.1:105..3533"
                     /db_xref="GeneID:121353230"
ORIGIN      
        1 msgpaqvpmm spngsvptiy vppgyapqvi edngvrrvvv vpqapefhpg ghtvihrpph
       61 pplpgflplp amipppprhi yspvtgagdm atqyipqyht sqvygdvdtl pahgrsnfrd
      121 erssktyerl qkklkdrhgt qkdklnspps spqkcpspts epngltkgqd aagistgstk
      181 cksldkgksn sqtdteveek deetkaleal lsniakpvvs diqartallm wsppssdtge
      241 dtdkndipev ytyevmlsst gkdgkyktvy igeenkvtvn dlrpatdyha kvqvecncvk
      301 gspsetesft tascepdtpn lpritnrtkn sltlqwkasc dngskihsyl lewdegkgng
      361 efcqcyygqq kqyritklsp amgytfrlaa kndmgmsdfs eevlyhtsgt apttpaspll
      421 inagvtwlsl qwtkpsgtps degisyilem edensgygfk pkydgddlty tvknlrrstk
      481 ykfrviayns egksspsetv eyitcpdkpg vpskptvkgk ihaqsfkiiw dppkdnggaa
      541 ihtyvvemse glsgnkwdti ysgaarehvc drlnpgssyr lrvycvgegg qstvtdsllv
      601 qtpavvpgpc qpprlqgrpr areiqlrwgp pqvdggspit cyglemfqae sdehrevyqg
      661 sdvectvgsl lpgrmysfrl raankagfgp ysekceitta pgppdqckpp qvscrsaaca
      721 qvswevpvsn gadvmeyrle wggvegcmqi sycgpglsce vkgllpatiy ycrvqavnva
      781 gagpfsevva cmtpasvpav vtclrglsed evesphysps tclaisweep cdhgseilgy
      841 sidfgdkqpi tvgkdltyfi dglqpdttyr vriqalnslg agpfshtikl ktkplppdpp
      901 rlecaayssq tlklkwgegt akaltdsiqy hlqmedkngr fvslyrgpch tykvqrlses
      961 tsykfciqac neagegplsq eyifttpksv paalkaprie rindhtceit wevlqpmkgd
     1021 pviyclqvmv gkdsefkqiy kgpdwsfryt glqlnceyrf racairqcqe atghqdlvgp
     1081 ystpvlfisq rteppastnk dtvqttrtqw sqsdqvcaav ilalfaifsi liaviiqyfv
     1141 ik
//
LOCUS       XP_041322815            1134 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type-III domain-containing protein 3A isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322815
VERSION     XP_041322815.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466881.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1134
                     /product="fibronectin type-III domain-containing protein
                     3A isoform X3"
                     /calculated_mol_wt=124651
     Region          <223..>539
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          401..>822
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <758..>998
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <943..>1111
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1134
                     /gene="FNDC3A"
                     /coded_by="XM_041466881.1:150..3554"
                     /db_xref="GeneID:121353230"
ORIGIN      
        1 mmspngsvpt iyvppgyapq viedngvrrv vvvpqapefh pgghtvihrp phpplpgflp
       61 lpamippppr hiyspvtgag dmatqyipqy htsqvygdvd tlpahgrsnf rderssktye
      121 rlqkklkdrh gtqkdklnsp psspqkcpsp tsepngltkg qdaagistgs tkcksldkgk
      181 snsqtdteve ekdeetkale allsniakpv vsdiqartal lmwsppssdt gedtdkndip
      241 evytyevmls stgkdgkykt vyigeenkvt vndlrpatdy hakvqvecnc vkgspsetes
      301 fttascepdt pnlpritnrt knsltlqwka scdngskihs yllewdegkg ngefcqcyyg
      361 qqkqyritkl spamgytfrl aakndmgmsd fseevlyhts gtapttpasp llinagvtwl
      421 slqwtkpsgt psdegisyil emedensgyg fkpkydgddl tytvknlrrs tkykfrviay
      481 nsegksspse tveyitcpdk pgvpskptvk gkihaqsfki iwdppkdngg aaihtyvvem
      541 seglsgnkwd tiysgaareh vcdrlnpgss yrlrvycvge ggqstvtdsl lvqtpavvpg
      601 pcqpprlqgr prareiqlrw gppqvdggsp itcyglemfq aesdehrevy qgsdvectvg
      661 sllpgrmysf rlraankagf gpysekceit tapgppdqck ppqvscrsaa caqvswevpv
      721 sngadvmeyr lewggvegcm qisycgpgls cevkgllpat iyycrvqavn vagagpfsev
      781 vacmtpasvp avvtclrgls edevesphys pstclaiswe epcdhgseil gysidfgdkq
      841 pitvgkdlty fidglqpdtt yrvriqalns lgagpfshti klktkplppd pprlecaays
      901 sqtlklkwge gtakaltdsi qyhlqmedkn grfvslyrgp chtykvqrls estsykfciq
      961 acneagegpl sqeyifttpk svpaalkapr ierindhtce itwevlqpmk gdpviyclqv
     1021 mvgkdsefkq iykgpdwsfr ytglqlncey rfracairqc qeatghqdlv gpystpvlfi
     1081 sqrteppast nkdtvqttrt qwsqsdqvca avilalfaif siliaviiqy fvik
//
LOCUS       XP_041322816            1099 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type-III domain-containing protein 3A isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322816
VERSION     XP_041322816.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466882.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1099
                     /product="fibronectin type-III domain-containing protein
                     3A isoform X4"
                     /calculated_mol_wt=120557
     Region          <288..>566
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          373..461
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(373,434,449)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(450..451,453..454)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          564..656
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(564,629,644)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(645..646,648..649)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          658..750
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(658,723,738)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <723..>963
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(739..740,742..743)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <908..>1076
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1099
                     /gene="FNDC3A"
                     /coded_by="XM_041466882.1:121..3420"
                     /db_xref="GeneID:121353230"
ORIGIN      
        1 mmaehpplld ttsiisseip lltspivsgd gaqqvilvqv npgeaftirr edgqfqcitg
       61 paqvpmmspn gsvptiyvpp gyapqviedn gvrrvvvvpq apefhpgght vihrpphppl
      121 pgflplpami pppprhiysp vtgagdmatq yipqyhtsqv ygdvdtlpah grsnfrders
      181 sktyerlqkk lkdrhgtqkd klnsppsspq kcpsptsepn gltkgqdaag istgstkcks
      241 ldkgksnsqt dteveekdee tkaleallsn iakpvvsdiq artallmwsp pssdtgedtd
      301 kndipevyty evmlsstgkd gkyktvyige enkvtvndlr patdyhakvq vecncvkgsp
      361 setesfttas cepdtpnlpr itnrtknslt lqwkascdng skihsyllew degygfkpky
      421 dgddltytvk nlrrstkykf rviaynsegk sspsetveyi tcpdkpgvps kptvkgkiha
      481 qsfkiiwdpp kdnggaaiht yvvemsegls gnkwdtiysg aarehvcdrl npgssyrlrv
      541 ycvgeggqst vtdsllvqtp avvpgpcqpp rlqgrprare iqlrwgppqv dggspitcyg
      601 lemfqaesde hrevyqgsdv ectvgsllpg rmysfrlraa nkagfgpyse kceittapgp
      661 pdqckppqvs crsaacaqvs wevpvsngad vmeyrlewgg vegcmqisyc gpglscevkg
      721 llpatiyycr vqavnvagag pfsevvacmt pasvpavvtc lrglsedeve sphyspstcl
      781 aisweepcdh gseilgysid fgdkqpitvg kdltyfidgl qpdttyrvri qalnslgagp
      841 fshtiklktk plppdpprle caayssqtlk lkwgegtaka ltdsiqyhlq medkngrfvs
      901 lyrgpchtyk vqrlsestsy kfciqacnea gegplsqeyi fttpksvpaa lkaprierin
      961 dhtceitwev lqpmkgdpvi yclqvmvgkd sefkqiykgp dwsfrytglq lnceyrfrac
     1021 airqcqeatg hqdlvgpyst pvlfisqrte ppastnkdtv qttrtqwsqs dqvcaavila
     1081 lfaifsilia viiqyfvik
//
LOCUS       XP_041322817            1070 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type-III domain-containing protein 3A isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322817
VERSION     XP_041322817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1070
                     /product="fibronectin type-III domain-containing protein
                     3A isoform X5"
                     /calculated_mol_wt=117057
     Region          273..368
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(357..358,360..361)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          373..432
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(421..422,424..425)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          437..530
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(437,503,518)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <499..>758
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(519..520,522..523)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <694..>934
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          <879..>1047
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1070
                     /gene="FNDC3A"
                     /coded_by="XM_041466883.1:121..3333"
                     /db_xref="GeneID:121353230"
ORIGIN      
        1 mmaehpplld ttsiisseip lltspivsgd gaqqvilvqv npgeaftirr edgqfqcitg
       61 paqvpmmspn gsvptiyvpp gyapqviedn gvrrvvvvpq apefhpgght vihrpphppl
      121 pgflplpami pppprhiysp vtgagdmatq yipqyhtsqv ygdvdtlpah grsnfrders
      181 sktyerlqkk lkdrhgtqkd klnsppsspq kcpsptsepn gltkgqdaag istgstkcks
      241 ldkgksnsqt dteveekdee tkaleallsn iakpvvsdiq artallmwsp pssdtgedtd
      301 kndipevyty evmlsstgkd gkyktvyige enkvtvndlr patdyhakvq vecncvkgsp
      361 setesfttas cepdtpnlpr itnrtknslt lqwkascdng skihsyllew deviaynseg
      421 ksspsetvey itcpdkpgvp skptvkgkih aqsfkiiwdp pkdnggaaih tyvvemsegl
      481 sgnkwdtiys gaarehvcdr lnpgssyrlr vycvgeggqs tvtdsllvqt pavvpgpcqp
      541 prlqgrprar eiqlrwgppq vdggspitcy glemfqaesd ehrevyqgsd vectvgsllp
      601 grmysfrlra ankagfgpys ekceittapg ppdqckppqv scrsaacaqv swevpvsnga
      661 dvmeyrlewg gvegcmqisy cgpglscevk gllpatiyyc rvqavnvaga gpfsevvacm
      721 tpasvpavvt clrglsedev esphyspstc laisweepcd hgseilgysi dfgdkqpitv
      781 gkdltyfidg lqpdttyrvr iqalnslgag pfshtiklkt kplppdpprl ecaayssqtl
      841 klkwgegtak altdsiqyhl qmedkngrfv slyrgpchty kvqrlsests ykfciqacne
      901 agegplsqey ifttpksvpa alkaprieri ndhtceitwe vlqpmkgdpv iyclqvmvgk
      961 dsefkqiykg pdwsfrytgl qlnceyrfra cairqcqeat ghqdlvgpys tpvlfisqrt
     1021 eppastnkdt vqttrtqwsq sdqvcaavil alfaifsili aviiqyfvik
//
LOCUS       XP_041322818             283 aa            linear   VRT 06-MAY-2021
DEFINITION  motilin receptor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322818
VERSION     XP_041322818.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466884.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="motilin receptor isoform X1"
                     /calculated_mol_wt=31716
     Region          38..>261
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          40..64
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          73..94
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          111..133
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          156..172
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          203..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..283
                     /gene="MLNR"
                     /coded_by="XM_041466884.1:53..904"
                     /db_xref="GeneID:121353231"
ORIGIN      
        1 mrrgggggng tegepewpwp wppcderlcl alpmwvlvpi tavclglfvv gvagnvltvl
       61 virsyrdmkt ttnlylgsma vsdllilmgl pfdlyrlwrs rpwifgqllc rlshylsegc
      121 tyctilhita ltverylaic fplkakvvvt krrvkatigv lwafallsas pffflvgveq
      181 pdnhtdfsre ckptpqalqs gllatmfwvt tcyfvlpvtc lsvlygcigr elwrsntrlr
      241 gpssllrekg hrqtvrilea vcdkylcqra hpgcqalvrs qml
//
LOCUS       XP_041322819             362 aa            linear   VRT 06-MAY-2021
DEFINITION  motilin receptor isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322819
VERSION     XP_041322819.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466885.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="motilin receptor isoform X2"
                     /calculated_mol_wt=40818
     Region          38..324
                     /region_name="7tmA_motilin_R"
                     /note="motilin receptor, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15132"
                     /db_xref="CDD:320260"
     Region          38..65
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320260"
     Region          72..97
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320260"
     Site            order(97,114,176,190..193,275..276,279..280,291,295)
                     /site_type="other"
                     /note="putative peptide ligand binding site [polypeptide
                     binding]"
                     /db_xref="CDD:320260"
     Region          110..140
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320260"
     Region          152..174
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320260"
     Region          202..231
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320260"
     Region          249..279
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320260"
     Region          292..317
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320260"
     CDS             1..362
                     /gene="MLNR"
                     /coded_by="XM_041466885.1:53..1141"
                     /db_xref="GeneID:121353231"
ORIGIN      
        1 mrrgggggng tegepewpwp wppcderlcl alpmwvlvpi tavclglfvv gvagnvltvl
       61 virsyrdmkt ttnlylgsma vsdllilmgl pfdlyrlwrs rpwifgqllc rlshylsegc
      121 tyctilhita ltverylaic fplkakvvvt krrvkatigv lwafallsas pffflvgveq
      181 pdnhtdfsre ckptpqalqs gllatmfwvt tcyfvlpvtc lsvlygcigr elwrsntrlr
      241 gpssllrekg hrqtvrilav vvlafvicwl pfhigriifi ntrdmrtmlf sqyfnifalq
      301 lfylsasinp vlynlvskky raaacklllp rraaerafti tkdaggytet sastrheytt
      361 sf
//
LOCUS       XP_041322821             741 aa            linear   VRT 06-MAY-2021
DEFINITION  tudor domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322821
VERSION     XP_041322821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="tudor domain-containing protein 3"
                     /calculated_mol_wt=83330
     Region          16..165
                     /region_name="RMI1_N"
                     /note="RecQ mediated genome instability protein;
                     pfam08585"
                     /db_xref="CDD:462527"
     Region          287..325
                     /region_name="UBA_TDRD3"
                     /note="UBA domain of Tudor domain-containing protein 3
                     (TDRD3) and similar proteins; cd14282"
                     /db_xref="CDD:270468"
     Region          404..>638
                     /region_name="PTZ00112"
                     /note="origin recognition complex 1 protein; Provisional"
                     /db_xref="CDD:240274"
     Region          645..697
                     /region_name="Tudor_TDRD3"
                     /note="Tudor domain found in Tudor domain-containing
                     protein 3 (TDRD3) and similar proteins; cd20413"
                     /db_xref="CDD:410484"
     Site            order(655..657,662,680,683,685,687)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410484"
     CDS             1..741
                     /gene="TDRD3"
                     /coded_by="XM_041466887.1:174..2399"
                     /db_xref="GeneID:121353233"
ORIGIN      
        1 madraraals esgwclsdeg ieaclsssek vdtndiilva lntdlrtigk kflpsdingg
       61 kveklegpcv lqiqkirnva apkdneesqa aprmlrlqmt dghtsctaie yssmskisln
      121 tppgtkikls givevrngfl llddsntavl ggevehliek welqrslakh nrsnigtegg
      181 pppfvpfgqk casyvqvdsr dldrrktlqv tntvkpvadn defekqrtaa iaevaksket
      241 ktfgggggss rsnlsvstgg nrnrelfqke kiakpegkne gvyrelvdek alkhitemgf
      301 skeaarqalm dnsnsleaal nfllnnskqk piqgppprgk gkgrgrirpe deeelgnarp
      361 sapstlfdfl eskmgtltve epklqfqpth qvqhkvmnte qngikenhsr hvsrndmrqp
      421 rnekpprfqk dfqnsrqale sgglprnrgp erhsslehwt deknksdrhy arndrskdvg
      481 ypitthqsdt tfkkrdnnmq nrvgkgvsfs efkensaaqd vtdnnnqkrg krdnpthnse
      541 nfcdrkarti ssesfmvkre qhfgvsndyq npsrtdnfna vpngdtehhq kgrrvgpiks
      601 sgptaipsfd dkmlyyntgp krrtgpikpe kilepsshme ygkswrpgdq cfalywednk
      661 fyraeiealh ssgttavvkf cdygnyeevl lsnirpvhad tweeeeetye qtlefrrggd
      721 gqprrstrpt qqfyqpprar n
//
LOCUS       XP_041322822            1648 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCCH domain-containing protein 13 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322822
VERSION     XP_041322822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466888.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1648
                     /product="zinc finger CCCH domain-containing protein 13
                     isoform X1"
                     /calculated_mol_wt=194038
     Region          42..63
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          295..>496
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          402..>628
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1648
                     /gene="ZC3H13"
                     /coded_by="XM_041466888.1:115..5061"
                     /db_xref="GeneID:121353234"
ORIGIN      
        1 mskirrkvtv entktisdst srrpsvferl gpstgstaet qcrnwlktgn clygntcrfv
       61 hgpsprgkgy sssyrrsper ptgdlrermk nkrqdveaep qkrsteesss pvrkessrgr
      121 hrekedikit kertpeseee ngdwetnred sdngdvnydy dhelslemkr qkiqrelmkl
      181 eqenmekree ivikkeispe vvrsklspsp sprksskspk rrsspkssss askkdkkapt
      241 vssplleqqr ssksaqskkk gprtpspppp vqeetplgkk hkekhkaker seekardvke
      301 rgrdferhke kkekqrdpse gsrrqkrsps padhsgsnss psreysppaa rrkqtsrapa
      361 kstthkhnfs psrrsaspsg qhhspissrh hssssqsgss vqrhspsphr krtpsptyqr
      421 taspparrss spypphsssp pqrkrspsrh rspgrdkgrh drdrtsqshd rrherrdetr
      481 gkrekeretr ddrdydqeqs tsrdhrddre srdgrdrrdt rdtrdrrepr esrdtrdsrd
      541 trdysrdtkd srdqrdsrst rdshdyrdre srdahkkddq yqddlrsygr shgreessra
      601 etrtdsrsds rnesrsdrig rsrgrgpels dkgsrgtrgs qadghsssgn yhdswesrss
      661 yadrdrydsr dqardssfer rhserdrrdn rerdqrassp vrhqgrsddl erderreerr
      721 vdrsddrrde rarererere rdrerererd rererekere lerdrarere rdrerekdrd
      781 rerdrdrdhd rerererere kererereer ererererdr erererergr drdkerdrqr
      841 dwddkekgre drrdkredir eergsrdvhe erkskkrhrn esspsprqsp krrrdhspds
      901 daynsgddkn ekhrllsqvv rpqesrslsp shvteerqsr wkeeerksdr kessrryeep
      961 efkervssad kqreqpdtse gsrsrvqenl ghrpseerda sdrmhddskk kskiqkkatk
     1021 kkkdddsgve ryanepatee sqvfspkkgq krknlekkrk rskgdsevsd eeivphhkkk
     1081 kgprtppvtk eelveappek avaevptkre dttfsdwsde dvpergdivv perttedshr
     1141 kshrtrvekv eaphvtiedg phrkpvdqkr ssslgsnrsh assrlrspsn esahrsgddq
     1201 tarkrilhss srdrdrdrdr ekksleiter ksridqlkrg epsrstssdr qdsrshssrr
     1261 sspesdrqvh srsgsfdsre rlqerdrheh drererdrre grqrdwdrdv dkdwprsrer
     1321 erlrererdr ekrrelerer drqlpdpaer erertldiss qkestkhset kldrdhekef
     1381 dgvcrdsvas ekektdkdlg plqgfedgne aekveslegg edetktndvq slgsgageye
     1441 pisddeldei lagdaekred qqedeklpgk npvdvidvdw sslmpkqpke prepgaallk
     1501 ftpgavmlrv giskrlagpe lftkiketcq rvlekpkdae nlfehelgal nmaalrrkee
     1561 ragllsnlgp cckalcfrrd sairkqlmkn ekgatkqtyt nsaamdsdll rlslrlfkrk
     1621 tvcqvpgqek tedskipqpa lqqevcvt
//
LOCUS       XP_041322823            1648 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCCH domain-containing protein 13 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322823
VERSION     XP_041322823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1648
                     /product="zinc finger CCCH domain-containing protein 13
                     isoform X1"
                     /calculated_mol_wt=194038
     Region          42..63
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          295..>496
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          402..>628
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1648
                     /gene="ZC3H13"
                     /coded_by="XM_041466889.1:106..5052"
                     /db_xref="GeneID:121353234"
ORIGIN      
        1 mskirrkvtv entktisdst srrpsvferl gpstgstaet qcrnwlktgn clygntcrfv
       61 hgpsprgkgy sssyrrsper ptgdlrermk nkrqdveaep qkrsteesss pvrkessrgr
      121 hrekedikit kertpeseee ngdwetnred sdngdvnydy dhelslemkr qkiqrelmkl
      181 eqenmekree ivikkeispe vvrsklspsp sprksskspk rrsspkssss askkdkkapt
      241 vssplleqqr ssksaqskkk gprtpspppp vqeetplgkk hkekhkaker seekardvke
      301 rgrdferhke kkekqrdpse gsrrqkrsps padhsgsnss psreysppaa rrkqtsrapa
      361 kstthkhnfs psrrsaspsg qhhspissrh hssssqsgss vqrhspsphr krtpsptyqr
      421 taspparrss spypphsssp pqrkrspsrh rspgrdkgrh drdrtsqshd rrherrdetr
      481 gkrekeretr ddrdydqeqs tsrdhrddre srdgrdrrdt rdtrdrrepr esrdtrdsrd
      541 trdysrdtkd srdqrdsrst rdshdyrdre srdahkkddq yqddlrsygr shgreessra
      601 etrtdsrsds rnesrsdrig rsrgrgpels dkgsrgtrgs qadghsssgn yhdswesrss
      661 yadrdrydsr dqardssfer rhserdrrdn rerdqrassp vrhqgrsddl erderreerr
      721 vdrsddrrde rarererere rdrerererd rererekere lerdrarere rdrerekdrd
      781 rerdrdrdhd rerererere kererereer ererererdr erererergr drdkerdrqr
      841 dwddkekgre drrdkredir eergsrdvhe erkskkrhrn esspsprqsp krrrdhspds
      901 daynsgddkn ekhrllsqvv rpqesrslsp shvteerqsr wkeeerksdr kessrryeep
      961 efkervssad kqreqpdtse gsrsrvqenl ghrpseerda sdrmhddskk kskiqkkatk
     1021 kkkdddsgve ryanepatee sqvfspkkgq krknlekkrk rskgdsevsd eeivphhkkk
     1081 kgprtppvtk eelveappek avaevptkre dttfsdwsde dvpergdivv perttedshr
     1141 kshrtrvekv eaphvtiedg phrkpvdqkr ssslgsnrsh assrlrspsn esahrsgddq
     1201 tarkrilhss srdrdrdrdr ekksleiter ksridqlkrg epsrstssdr qdsrshssrr
     1261 sspesdrqvh srsgsfdsre rlqerdrheh drererdrre grqrdwdrdv dkdwprsrer
     1321 erlrererdr ekrrelerer drqlpdpaer erertldiss qkestkhset kldrdhekef
     1381 dgvcrdsvas ekektdkdlg plqgfedgne aekveslegg edetktndvq slgsgageye
     1441 pisddeldei lagdaekred qqedeklpgk npvdvidvdw sslmpkqpke prepgaallk
     1501 ftpgavmlrv giskrlagpe lftkiketcq rvlekpkdae nlfehelgal nmaalrrkee
     1561 ragllsnlgp cckalcfrrd sairkqlmkn ekgatkqtyt nsaamdsdll rlslrlfkrk
     1621 tvcqvpgqek tedskipqpa lqqevcvt
//
LOCUS       XP_041322824            1646 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCCH domain-containing protein 13 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322824
VERSION     XP_041322824.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466890.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1646
                     /product="zinc finger CCCH domain-containing protein 13
                     isoform X2"
                     /calculated_mol_wt=193854
     Region          42..63
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          295..>496
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          402..>628
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1646
                     /gene="ZC3H13"
                     /coded_by="XM_041466890.1:115..5055"
                     /db_xref="GeneID:121353234"
ORIGIN      
        1 mskirrkvtv entktisdst srrpsvferl gpstgstaet qcrnwlktgn clygntcrfv
       61 hgpsprgkgy sssyrrsper ptgdlrermk nkrqdveaep qkrsteesss pvrkessrgr
      121 hrekedikit kertpeseee ngdwetnred sdngdvnydy dhelslemkr qkiqrelmkl
      181 eqenmekree ivikkeispe vvrsklspsp sprksskspk rrsspkssss askkdkkapt
      241 vssplleqqr ssksaqskkk gprtpspppp vqeetplgkk hkekhkaker seekardvke
      301 rgrdferhke kkekqrdpse gsrrqkrsps padhsgsnss psreysppaa rrkqtsrapa
      361 kstthkhnfs psrrsaspsg qhhspissrh hssssqsgss vqrhspsphr krtpsptyqr
      421 taspparrss spypphsssp pqrkrspsrh rspgrdkgrh drdrtsqshd rrherrdetr
      481 gkrekeretr ddrdydqeqs tsrdhrddre srdgrdrrdt rdtrdrrepr esrdtrdsrd
      541 trdysrdtkd srdqrdsrst rdshdyrdre srdahkkddq yqddlrsygr shgreessra
      601 etrtdsrsds rnesrsdrig rsrgrgpels dkgsrgtrgs qadghsssgn yhdswesrss
      661 yadrdrydsr dqardssfer rhserdrrdn rerdqrassp vrhqgrsddl erderreerr
      721 vdrsddrrde rarererere rdrerererd rererekere lerdrarere rdrerekdrd
      781 rerdrdrdhd rerererere kererereer ererererdr erererergr drdkerdrqr
      841 dwddkekgre drrdkredir eergsrdvhe erkskkrhrn esspsprqsp krrrdhspds
      901 daynsgddkn ekhrllsqvv rpqesrslsp shvteerqsr wkeeerksdr kessrryeep
      961 efkervssad kqreqpdtse gsrsrvqenl ghrpseerda sdrmhddskk kskiqkkatk
     1021 kkkdddsgve ryanepatee sqvfspkkgq krknlekkrk rskgdsevsd eeivphhkkk
     1081 kgprtppvtk eelveappek avaevptkre dttfsdwsde dvpergdivv perttedshr
     1141 kshrtrvekv eaphvtiedg phrkpvdqkr ssslgsnrsh assrlrspsn esahrsgddq
     1201 tarkrilhss srdrdrdrdr ekksleiter ksridqlkrg epsrstssdr qdsrshssrr
     1261 sspesdrqvh srsgsfdsre rlqerdrheh drererdrre grqrdwdrdv dkdwprsrer
     1321 erlrererdr ekrrelerer drqlpdpaer erertldiss qkestkhset kldrdhekef
     1381 dgvcrdsvas ekektdkdlg plqgfedgne aekveslegg edetktndvq slgsgageye
     1441 pisddeldei lagdaekred qqedeklpdp vdvidvdwss lmpkqpkepr epgaallkft
     1501 pgavmlrvgi skrlagpelf tkiketcqrv lekpkdaenl fehelgalnm aalrrkeera
     1561 gllsnlgpcc kalcfrrdsa irkqlmknek gatkqtytns aamdsdllrl slrlfkrktv
     1621 cqvpgqekte dskipqpalq qevcvt
//
LOCUS       XP_041322825            1574 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCCH domain-containing protein 13 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322825
VERSION     XP_041322825.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466891.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1574
                     /product="zinc finger CCCH domain-containing protein 13
                     isoform X3"
                     /calculated_mol_wt=185799
     Region          221..>422
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          328..>554
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1574
                     /gene="ZC3H13"
                     /coded_by="XM_041466891.1:16..4740"
                     /db_xref="GeneID:121353234"
ORIGIN      
        1 mrsperptgd lrermknkrq dveaepqkrs teessspvrk essrgrhrek edikitkert
       61 peseeengdw etnredsdng dvnydydhel slemkrqkiq relmkleqen mekreeivik
      121 keispevvrs klspspsprk sskspkrrss pkssssaskk dkkaptvssp lleqqrssks
      181 aqskkkgprt psppppvqee tplgkkhkek hkakerseek ardvkergrd ferhkekkek
      241 qrdpsegsrr qkrspspadh sgsnsspsre ysppaarrkq tsrapakstt hkhnfspsrr
      301 saspsgqhhs pissrhhsss sqsgssvqrh spsphrkrtp sptyqrtasp parrssspyp
      361 phsssppqrk rspsrhrspg rdkgrhdrdr tsqshdrrhe rrdetrgkre keretrddrd
      421 ydqeqstsrd hrddresrdg rdrrdtrdtr drrepresrd trdsrdtrdy srdtkdsrdq
      481 rdsrstrdsh dyrdresrda hkkddqyqdd lrsygrshgr eessraetrt dsrsdsrnes
      541 rsdrigrsrg rgpelsdkgs rgtrgsqadg hsssgnyhds wesrssyadr drydsrdqar
      601 dssferrhse rdrrdnrerd qrasspvrhq grsddlerde rreerrvdrs ddrrderare
      661 rerererdre rererdrere rekerelerd rarererdre rekdrdrerd rdrdhdrere
      721 rererekere rereererer ererdrerer erergrdrdk erdrqrdwdd kekgredrrd
      781 kredireerg srdvheerks kkrhrnessp sprqspkrrr dhspdsdayn sgddknekhr
      841 llsqvvrpqe srslspshvt eerqsrwkee erksdrkess rryeepefke rvssadkqre
      901 qpdtsegsrs rvqenlghrp seerdasdrm hddskkkski qkkatkkkkd ddsgveryan
      961 epateesqvf spkkgqkrkn lekkrkrskg dsevsdeeiv phhkkkkgpr tppvtkeelv
     1021 eappekavae vptkredttf sdwsdedvpe rgdivvpert tedshrkshr trvekveaph
     1081 vtiedgphrk pvdqkrsssl gsnrshassr lrspsnesah rsgddqtark rilhsssrdr
     1141 drdrdrekks leiterksri dqlkrgepsr stssdrqdsr shssrrsspe sdrqvhsrsg
     1201 sfdsrerlqe rdrhehdrer erdrregrqr dwdrdvdkdw prsrererlr ererdrekrr
     1261 elererdrql pdpaererer tldissqkes tkhsetkldr dhekefdgvc rdsvasekek
     1321 tdkdlgplqg fedgneaekv esleggedet ktndvqslgs gageyepisd deldeilagd
     1381 aekredqqed eklpgknpvd vidvdwsslm pkqpkeprep gaallkftpg avmlrvgisk
     1441 rlagpelftk iketcqrvle kpkdaenlfe helgalnmaa lrrkeeragl lsnlgpccka
     1501 lcfrrdsair kqlmknekga tkqtytnsaa mdsdllrlsl rlfkrktvcq vpgqekteds
     1561 kipqpalqqe vcvt
//
LOCUS       XP_041322826            1057 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322826
VERSION     XP_041322826.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466892.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1057
                     /product="TSC22 domain family protein 1 isoform X1"
                     /calculated_mol_wt=107730
     Region          492..>675
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          <616..>887
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          971..1018
                     /region_name="ZIP_TSC22D"
                     /note="leucine zipper domain found in the TSC22 domain
                     family of leucine zipper transcription factors; cd21936"
                     /db_xref="CDD:409276"
     Site            order(985..987,990,993..994,997..998,1000..1001,
                     1004..1005,1007..1008,1011..1012,1015)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409276"
     CDS             1..1057
                     /gene="TSC22D1"
                     /coded_by="XM_041466892.1:1..3174"
                     /db_xref="GeneID:121353235"
ORIGIN      
        1 mhqpdsaadi sarkmahpam fprrgsssss gsscvtapta pgtgvgsaal saedyqppll
       61 vqppppspaa astagpqptp phpqslnlls qsqlqpqpla qtgaqmkkks gfqitsvtpa
      121 qisasmssnn siaedtesyd dldeshtedl ssseildvsl sratdmgepe rssseetlnn
      181 fqeaetpgav spnqphlpqq haplphhpqq svvingsvhp hhvhhhhhlh hhhhghhhps
      241 hpgvgsapvs ggpppspsfr klsttgssdn vistapvsaa sstgspasav snirttsspg
      301 nlgispaagt stlsnigggs ssvasnvlgt inlsnimstg nvnalsgtss nanvnilsgv
      361 gngtsasssv innvtnptag mavgssqqqp asgtsrfrvv kldsssepfk kgrwtctefy
      421 dkentvavse gvavnkavet ikqnplevts erestsgssv ssnvstlshy tesvgsgemg
      481 aptvvqqqaf qgvgpqqmdf ssaappaipa ssipqsvsqs qlaqvqlhsq evnypqqkpg
      541 vqppaqaslt tvtgvqpapv nilgvspslg hqqpalqsma qqqlpysqpa qpvqtlpvvq
      601 qqlqygqqqq qqpvptqmaa ghvkpvnqns vtgampdyiq hqqilqtpap amqpsstgvg
      661 agqpvpvaqa qgmqptvqah paaapaqpva hapaaipgva asgqmlnvgq qgsvaavvqp
      721 psaanqippp vmpstaaaps sqvvqsvqtg imqqglqasa tglpqqmvia qqntllpvqp
      781 qaqgvesvvq gmtgqqlpav spipsastvp apsqagsavp pgipsasvgl gqpqniaqas
      841 avqngslaqs vsqpplists igmpvaqsvp qqmplsstqf paqslaqsiv sqiedgrrpt
      901 epslaglpqa asvesgggas aasdggssnv pssaslfplk vlplttplvd gedesssgas
      961 vvaidnkieq amdlvkshlm yavreevevl keqikeliek nsqleqentl lktlaspeql
     1021 aqfqaqlqtg sppsssqsqg taqqpaqpas qgsgpsa
//
LOCUS       XP_041322827            1043 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322827
VERSION     XP_041322827.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466893.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1043
                     /product="TSC22 domain family protein 1 isoform X2"
                     /calculated_mol_wt=106221
     Region          478..>661
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          <602..>873
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          957..1004
                     /region_name="ZIP_TSC22D"
                     /note="leucine zipper domain found in the TSC22 domain
                     family of leucine zipper transcription factors; cd21936"
                     /db_xref="CDD:409276"
     Site            order(971..973,976,979..980,983..984,986..987,990..991,
                     993..994,997..998,1001)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409276"
     CDS             1..1043
                     /gene="TSC22D1"
                     /coded_by="XM_041466893.1:477..3608"
                     /db_xref="GeneID:121353235"
ORIGIN      
        1 mahpamfprr gsssssgssc vtaptapgtg vgsaalsaed yqppllvqpp ppspaaasta
       61 gpqptpphpq slnllsqsql qpqplaqtga qmkkksgfqi tsvtpaqisa smssnnsiae
      121 dtesyddlde shtedlssse ildvslsrat dmgepersss eetlnnfqea etpgavspnq
      181 phlpqqhapl phhpqqsvvi ngsvhphhvh hhhhlhhhhh ghhhpshpgv gsapvsggpp
      241 pspsfrklst tgssdnvist apvsaasstg spasavsnir ttsspgnlgi spaagtstls
      301 nigggsssva snvlgtinls nimstgnvna lsgtssnanv nilsgvgngt sasssvinnv
      361 tnptagmavg ssqqqpasgt srfrvvklds ssepfkkgrw tctefydken tvavsegvav
      421 nkavetikqn plevtseres tsgssvssnv stlshytesv gsgemgaptv vqqqafqgvg
      481 pqqmdfssaa ppaipassip qsvsqsqlaq vqlhsqevny pqqkpgvqpp aqaslttvtg
      541 vqpapvnilg vspslghqqp alqsmaqqql pysqpaqpvq tlpvvqqqlq ygqqqqqqpv
      601 ptqmaaghvk pvnqnsvtga mpdyiqhqqi lqtpapamqp sstgvgagqp vpvaqaqgmq
      661 ptvqahpaaa paqpvahapa aipgvaasgq mlnvgqqgsv aavvqppsaa nqipppvmps
      721 taaapssqvv qsvqtgimqq glqasatglp qqmviaqqnt llpvqpqaqg vesvvqgmtg
      781 qqlpavspip sastvpapsq agsavppgip sasvglgqpq niaqasavqn gslaqsvsqp
      841 plistsigmp vaqsvpqqmp lsstqfpaqs laqsivsqie dgrrptepsl aglpqaasve
      901 sgggasaasd ggssnvpssa slfplkvlpl ttplvdgede sssgasvvai dnkieqamdl
      961 vkshlmyavr eevevlkeqi kelieknsql eqentllktl aspeqlaqfq aqlqtgspps
     1021 ssqsqgtaqq paqpasqgsg psa
//
LOCUS       XP_041322828             144 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322828
VERSION     XP_041322828.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466894.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..144
                     /product="TSC22 domain family protein 1 isoform X3"
                     /calculated_mol_wt=15363
     Region          54..132
                     /region_name="ZIP_TSC22D-like"
                     /note="leucine zipper found in the TSC22 domain leucine
                     zipper transcription factors, c-Myc-binding protein, and
                     similar proteins; cl40461"
                     /db_xref="CDD:424092"
     Site            order(72,74..75,77..82,84..85,87..88,91..92,94..95,98..99,
                     101..102,105..106)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409275"
     CDS             1..144
                     /gene="TSC22D1"
                     /coded_by="XM_041466894.1:198..632"
                     /db_xref="GeneID:121353235"
ORIGIN      
        1 mnaqccrpva mdlgvyqlrh fsisflssll gtdtsslrld ssssgasvva idnkieqamd
       61 lvkshlmyav reevevlkeq ikelieknsq leqentllkt laspeqlaqf qaqlqtgspp
      121 sssqsqgtaq qpaqpasqgs gpsa
//
LOCUS       XP_041322829              86 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322829
VERSION     XP_041322829.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466895.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="TSC22 domain family protein 1 isoform X4"
                     /calculated_mol_wt=9189
     Region          1..47
                     /region_name="ZIP_TSC22D"
                     /note="leucine zipper domain found in the TSC22 domain
                     family of leucine zipper transcription factors; cd21936"
                     /db_xref="CDD:409276"
     Site            order(14..16,19,22..23,26..27,29..30,33..34,36..37,40..41,
                     44)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409276"
     CDS             1..86
                     /gene="TSC22D1"
                     /coded_by="XM_041466895.1:189..449"
                     /db_xref="GeneID:121353235"
ORIGIN      
        1 mdlvkshlmy avreevevlk eqikeliekn sqleqentll ktlaspeqla qfqaqlqtgs
       61 ppsssqsqgt aqqpaqpasq gsgpsa
//
LOCUS       XP_041322831              86 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322831
VERSION     XP_041322831.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466897.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="TSC22 domain family protein 1 isoform X4"
                     /calculated_mol_wt=9189
     Region          1..47
                     /region_name="ZIP_TSC22D"
                     /note="leucine zipper domain found in the TSC22 domain
                     family of leucine zipper transcription factors; cd21936"
                     /db_xref="CDD:409276"
     Site            order(14..16,19,22..23,26..27,29..30,33..34,36..37,40..41,
                     44)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409276"
     CDS             1..86
                     /gene="TSC22D1"
                     /coded_by="XM_041466897.1:111..371"
                     /db_xref="GeneID:121353235"
ORIGIN      
        1 mdlvkshlmy avreevevlk eqikeliekn sqleqentll ktlaspeqla qfqaqlqtgs
       61 ppsssqsqgt aqqpaqpasq gsgpsa
//
LOCUS       XP_041322832              86 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322832
VERSION     XP_041322832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466898.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="TSC22 domain family protein 1 isoform X4"
                     /calculated_mol_wt=9189
     Region          1..47
                     /region_name="ZIP_TSC22D"
                     /note="leucine zipper domain found in the TSC22 domain
                     family of leucine zipper transcription factors; cd21936"
                     /db_xref="CDD:409276"
     Site            order(14..16,19,22..23,26..27,29..30,33..34,36..37,40..41,
                     44)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409276"
     CDS             1..86
                     /gene="TSC22D1"
                     /coded_by="XM_041466898.1:70..330"
                     /db_xref="GeneID:121353235"
ORIGIN      
        1 mdlvkshlmy avreevevlk eqikeliekn sqleqentll ktlaspeqla qfqaqlqtgs
       61 ppsssqsqgt aqqpaqpasq gsgpsa
//
LOCUS       XP_041322833              86 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322833
VERSION     XP_041322833.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466899.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="TSC22 domain family protein 1 isoform X4"
                     /calculated_mol_wt=9189
     Region          1..47
                     /region_name="ZIP_TSC22D"
                     /note="leucine zipper domain found in the TSC22 domain
                     family of leucine zipper transcription factors; cd21936"
                     /db_xref="CDD:409276"
     Site            order(14..16,19,22..23,26..27,29..30,33..34,36..37,40..41,
                     44)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409276"
     CDS             1..86
                     /gene="TSC22D1"
                     /coded_by="XM_041466899.1:70..330"
                     /db_xref="GeneID:121353235"
ORIGIN      
        1 mdlvkshlmy avreevevlk eqikeliekn sqleqentll ktlaspeqla qfqaqlqtgs
       61 ppsssqsqgt aqqpaqpasq gsgpsa
//
LOCUS       XP_041322834             896 aa            linear   VRT 06-MAY-2021
DEFINITION  retinoblastoma-associated protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322834
VERSION     XP_041322834.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466900.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="retinoblastoma-associated protein"
                     /calculated_mol_wt=101901
     Region          75..189
                     /region_name="DUF3452"
                     /note="Domain of unknown function (DUF3452); pfam11934"
                     /db_xref="CDD:463402"
     Region          337..539
                     /region_name="RB_A"
                     /note="Retinoblastoma-associated protein A domain;
                     pfam01858"
                     /db_xref="CDD:460364"
     Region          <517..611
                     /region_name="Patatin_and_cPLA2"
                     /note="Patatins and Phospholipases; cl11396"
                     /db_xref="CDD:416256"
     Region          611..737
                     /region_name="CYCLIN_RB"
                     /note="cyclin box found in retinoblastoma-associated
                     protein (RB) and similar proteins; cd20599"
                     /db_xref="CDD:410302"
     Site            order(611,615,618..619,622,626)
                     /site_type="other"
                     /note="E2F transcription factor binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410302"
     Site            order(675,679..680,686..687,719,722..723,727)
                     /site_type="other"
                     /note="LxCxE peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410302"
     Region          734..891
                     /region_name="Rb_C"
                     /note="Rb C-terminal domain; pfam08934"
                     /db_xref="CDD:462639"
     CDS             1..896
                     /gene="RB1"
                     /coded_by="XM_041466900.1:1..2691"
                     /db_xref="GeneID:121353236"
ORIGIN      
        1 mcdafprvev geadfvvlcd alkvsesvre kawktyesls aadgalacnt kkketwgvci
       61 fivaidldev tftftellks inmsvctffq flkevdvnmd tvstkvdstv srlkkkydvl
      121 falyhkfert cgliyleqps seisaelssv lvlknywitf llakgkvlqv eddlvisfql
      181 llcvldyfik lsppamlkep ykssvsavtv ngsartprrg qnrssrtakq ldtdtkiiei
      241 lckehdcnld evknvyftsf ipflnsagiv asnglpevev ilkqydelyl knkdidarlf
      301 lnhdetlqpd viacsqlert plknnpdeei svilpqtpvr aamnniqqli milnsaadkp
      361 sdvlikyfnn ctvnpkdsil krvesfdhif kkkfaeavgq gwaeigsqry klgvrlyyrv
      421 mesmlkseee rlsvqnfskl lndnifhtsl lacavevvma tygrnasqsd stsaetdlsf
      481 pwilnvfdlk afdfykvies firaepsltr emikhlehce hrimeslawq sgsplfdlik
      541 qskeregqad qpeppstpnm pfqhnhtaad lylspvkspk kkasgpplsa tsppdvqpav
      601 tpqtqkpqks tslslfykkv yllayrrlht lflhllsdhp dlepliwtlf qhtlqneyel
      661 mrdrhldqim mcsmygickv knvdlrfkmi vsaykelcnt nqetfkrvli reeqydsiiv
      721 fynlvfmqkl ktnilqyass rpptlspiph iprspyqfsn sprrvpagnn iyisplkspy
      781 kfsdgfqspt kmtprsrilv sigesfgtse kfqkinqmlc nsecqlkrsa evgaaapkpl
      841 krlrfdiegt deadgskhlp qeskfqqkla emtstrtrmq kqklndgndt saseek
//
LOCUS       XP_041322835             550 aa            linear   VRT 06-MAY-2021
DEFINITION  RCC1 and BTB domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322835
VERSION     XP_041322835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..550
                     /product="RCC1 and BTB domain-containing protein 2"
                     /calculated_mol_wt=60265
     Region          62..335
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          374..489
                     /region_name="BTB_POZ_RCBTB2_CHC1L"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in RCC1 and BTB
                     domain-containing protein 2 (RCBTB2); cd18354"
                     /db_xref="CDD:349663"
     Region          486..550
                     /region_name="BACK_RCBTB2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     RCC1 and BTB domain-containing protein 2 (RCBTB2);
                     cd18529"
                     /db_xref="CDD:350604"
     CDS             1..550
                     /gene="RCBTB2"
                     /coded_by="XM_041466901.1:101..1753"
                     /db_xref="GeneID:121353238"
ORIGIN      
        1 medepppqgv sakaleatll salkmldvgk wpifslcspe eiklirqacv fgsagnevly
       61 atendevfvl gmncsgclgt gdmqstiepr rldslcgkki aclsygsgph vvlateegev
      121 ytwghnaysq lgngttnhgf vpcqvstnlv nkkvievacg shhsmvltsd gevytwgynn
      181 sgqvgsgsta nqpiprrvts clqnkivvni acgqmcsmav vengevyvwg yngngqlglg
      241 ssgnqptpcr iaalqgirvq rvacgyahtl vltdegqiya wgansygqlg tgnksnqsyp
      301 ttvivdkdrv ieiaachsah tsaaktqsgq vymwgqcrgq svtfphlthf actddvfacf
      361 atpavmwrll svepddhltv aqslkkefdn petadlkflv dgkyihvhkv llkircehfr
      421 svlnnddeii emsefsypvy rafleylytd nirlppedai glldlatlyr enrlkklcqq
      481 tikqgiceen aiallsaavk yeaqdleefc frfcinhltv vtqtqgfadm dhdllknfis
      541 kasrvgafrn
//
LOCUS       XP_041322836             340 aa            linear   VRT 06-MAY-2021
DEFINITION  lysophosphatidic acid receptor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322836
VERSION     XP_041322836.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466902.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="lysophosphatidic acid receptor 6"
                     /calculated_mol_wt=39169
     Region          15..299
                     /region_name="7tmA_LPAR6_P2Y5"
                     /note="lysophosphatidic acid receptor 6, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15156"
                     /db_xref="CDD:320284"
     Region          15..42
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320284"
     Region          49..74
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320284"
     Site            order(70,73..74,86..91,93..94,97,142,144..148,178,
                     181..183,185..187,189..190,239,242..243,245..246,249,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320284"
     Region          86..116
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320284"
     Region          128..150
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320284"
     Region          178..207
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320284"
     Region          219..249
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320284"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320284"
     CDS             1..340
                     /gene="LPAR6"
                     /coded_by="XM_041466902.1:498..1520"
                     /db_xref="GeneID:121353239"
ORIGIN      
        1 mvssncsted sfkytlygci fsmvfvlgli ancvaiyift ctlkvrnett tymlnlaisd
       61 llfvftlpfr iyyfvtrnwp fgdilckisv tlfytnmygs ilfltcisvd rflaivhpfr
      121 sktlrtkrna kivcaavwit vlagstpasf fqstnrrnnt eqrtcfenfs edtwktylsr
      181 ivifietvgf fiplilnvtc stmvlrtlnk pltlsrnkvs kkkvlkmifv hlvifcfcfv
      241 pynitlilys lmrtqtwvnc svvtavrtmy pitlciavsn ccfdpivyyf tsdtiqnsik
      301 knrstrprdv rfserpvses fiqhslqtik mkifdsdsti
//
LOCUS       XP_041322837             340 aa            linear   VRT 06-MAY-2021
DEFINITION  lysophosphatidic acid receptor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322837
VERSION     XP_041322837.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466903.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="lysophosphatidic acid receptor 6"
                     /calculated_mol_wt=39169
     Region          15..299
                     /region_name="7tmA_LPAR6_P2Y5"
                     /note="lysophosphatidic acid receptor 6, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15156"
                     /db_xref="CDD:320284"
     Region          15..42
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320284"
     Region          49..74
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320284"
     Site            order(70,73..74,86..91,93..94,97,142,144..148,178,
                     181..183,185..187,189..190,239,242..243,245..246,249,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320284"
     Region          86..116
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320284"
     Region          128..150
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320284"
     Region          178..207
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320284"
     Region          219..249
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320284"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320284"
     CDS             1..340
                     /gene="LPAR6"
                     /coded_by="XM_041466903.1:261..1283"
                     /db_xref="GeneID:121353239"
ORIGIN      
        1 mvssncsted sfkytlygci fsmvfvlgli ancvaiyift ctlkvrnett tymlnlaisd
       61 llfvftlpfr iyyfvtrnwp fgdilckisv tlfytnmygs ilfltcisvd rflaivhpfr
      121 sktlrtkrna kivcaavwit vlagstpasf fqstnrrnnt eqrtcfenfs edtwktylsr
      181 ivifietvgf fiplilnvtc stmvlrtlnk pltlsrnkvs kkkvlkmifv hlvifcfcfv
      241 pynitlilys lmrtqtwvnc svvtavrtmy pitlciavsn ccfdpivyyf tsdtiqnsik
      301 knrstrprdv rfserpvses fiqhslqtik mkifdsdsti
//
LOCUS       XP_041322838             340 aa            linear   VRT 06-MAY-2021
DEFINITION  lysophosphatidic acid receptor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322838
VERSION     XP_041322838.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466904.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="lysophosphatidic acid receptor 6"
                     /calculated_mol_wt=39169
     Region          15..299
                     /region_name="7tmA_LPAR6_P2Y5"
                     /note="lysophosphatidic acid receptor 6, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15156"
                     /db_xref="CDD:320284"
     Region          15..42
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320284"
     Region          49..74
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320284"
     Site            order(70,73..74,86..91,93..94,97,142,144..148,178,
                     181..183,185..187,189..190,239,242..243,245..246,249,
                     266..267,269..271,274,277..278)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320284"
     Region          86..116
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320284"
     Region          128..150
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320284"
     Region          178..207
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320284"
     Region          219..249
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320284"
     Region          267..292
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320284"
     CDS             1..340
                     /gene="LPAR6"
                     /coded_by="XM_041466904.1:514..1536"
                     /db_xref="GeneID:121353239"
ORIGIN      
        1 mvssncsted sfkytlygci fsmvfvlgli ancvaiyift ctlkvrnett tymlnlaisd
       61 llfvftlpfr iyyfvtrnwp fgdilckisv tlfytnmygs ilfltcisvd rflaivhpfr
      121 sktlrtkrna kivcaavwit vlagstpasf fqstnrrnnt eqrtcfenfs edtwktylsr
      181 ivifietvgf fiplilnvtc stmvlrtlnk pltlsrnkvs kkkvlkmifv hlvifcfcfv
      241 pynitlilys lmrtqtwvnc svvtavrtmy pitlciavsn ccfdpivyyf tsdtiqnsik
      301 knrstrprdv rfserpvses fiqhslqtik mkifdsdsti
//
LOCUS       XP_041322839             770 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322839
VERSION     XP_041322839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="transcription factor SPT20 homolog isoform X1"
                     /calculated_mol_wt=83625
     Region          82..219
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..770
                     /gene="SUPT20H"
                     /coded_by="XM_041466905.1:84..2396"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 qklrrnvnll eklvmqetls clvvnlypgn egyslmlrgk ngsdsetirl pyeegelley
      121 ldaeelppil vdlleksqvn ifhcgcviae irdyrqsgnm ksptyqskhi llrptmqtli
      181 cdvhsitsdn hkwtqedkll lesqlilata eplcldpsia vtcttnrlly nkqkmntrpm
      241 krcfkrysrs slnrqqevah ystppqlrll dylqkrkerk taqqydlkis kagncvdmwk
      301 qnpcyltaps evdvekyakv eksiksddsq ptvwpahemk ddyvfecevg nqvqktklti
      361 fqslgnplyy gkiqtlkgde endnlltpsq fligsktdae rvvnqyqelv qneakctvkm
      421 fhnssgsvsr lspgkemeqp esvsgsvqss vlgkgvkhrp ppiklpsssg ssssgnifss
      481 qqssghlksp tppppskppg lsrkqsmdln qvsmlspaam spasssqrsg tpkpstptpt
      541 ntpsstphpp daqsstpitl satptpqdsg ftpqptlltp faqqqmslsq alpvmtipls
      601 tmvtsittgt tstqvmanpa glnfinvvgs vcgaqslmsg snpmlgcntg aiapaginls
      661 gilppgglvp salpaamqsa sqagspfglk ntsnlrplnl lqgsdqgpsn qdqalsaqqa
      721 avinltgvgn fmqpqatava ilaasngygs gsstssssas sttfrqplkk
//
LOCUS       XP_041322840             769 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322840
VERSION     XP_041322840.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466906.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="transcription factor SPT20 homolog isoform X2"
                     /calculated_mol_wt=83497
     Region          81..218
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..769
                     /gene="SUPT20H"
                     /coded_by="XM_041466906.1:84..2393"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 klrrnvnlle klvmqetlsc lvvnlypgne gyslmlrgkn gsdsetirlp yeegelleyl
      121 daeelppilv dlleksqvni fhcgcviaei rdyrqsgnmk sptyqskhil lrptmqtlic
      181 dvhsitsdnh kwtqedklll esqlilatae plcldpsiav tcttnrllyn kqkmntrpmk
      241 rcfkrysrss lnrqqevahy stppqlrlld ylqkrkerkt aqqydlkisk agncvdmwkq
      301 npcyltapse vdvekyakve ksiksddsqp tvwpahemkd dyvfecevgn qvqktkltif
      361 qslgnplyyg kiqtlkgdee ndnlltpsqf ligsktdaer vvnqyqelvq neakctvkmf
      421 hnssgsvsrl spgkemeqpe svsgsvqssv lgkgvkhrpp piklpsssgs sssgnifssq
      481 qssghlkspt ppppskppgl srkqsmdlnq vsmlspaams passsqrsgt pkpstptptn
      541 tpsstphppd aqsstpitls atptpqdsgf tpqptlltpf aqqqmslsqa lpvmtiplst
      601 mvtsittgtt stqvmanpag lnfinvvgsv cgaqslmsgs npmlgcntga iapaginlsg
      661 ilppgglvps alpaamqsas qagspfglkn tsnlrplnll qgsdqgpsnq dqalsaqqaa
      721 vinltgvgnf mqpqatavai laasngygsg sstssssass ttfrqplkk
//
LOCUS       XP_041322841             769 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322841
VERSION     XP_041322841.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466907.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="transcription factor SPT20 homolog isoform X3"
                     /calculated_mol_wt=83497
     Region          82..219
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..769
                     /gene="SUPT20H"
                     /coded_by="XM_041466907.1:84..2393"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 qklrrnvnll eklvmqetls clvvnlypgn egyslmlrgk ngsdsetirl pyeegelley
      121 ldaeelppil vdlleksqvn ifhcgcviae irdyrqsgnm ksptyqskhi llrptmqtli
      181 cdvhsitsdn hkwtqedkll lesqlilata eplcldpsia vtcttnrlly nkqkmntrpm
      241 krcfkrysrs slnrqqevah ystppqlrll dylqkrkerk taqqydlkis kagncvdmwk
      301 qnpcyltaps evdvekyakv eksiksddsq ptvwpahemk ddyvfecevg nqvqktklti
      361 fqslgnplyy gkiqtlkgde endnlltpsq fligsktdae rvvnqyqelv qneakctvkm
      421 fhnssgsvsr lspgkemepe svsgsvqssv lgkgvkhrpp piklpsssgs sssgnifssq
      481 qssghlkspt ppppskppgl srkqsmdlnq vsmlspaams passsqrsgt pkpstptptn
      541 tpsstphppd aqsstpitls atptpqdsgf tpqptlltpf aqqqmslsqa lpvmtiplst
      601 mvtsittgtt stqvmanpag lnfinvvgsv cgaqslmsgs npmlgcntga iapaginlsg
      661 ilppgglvps alpaamqsas qagspfglkn tsnlrplnll qgsdqgpsnq dqalsaqqaa
      721 vinltgvgnf mqpqatavai laasngygsg sstssssass ttfrqplkk
//
LOCUS       XP_041322842             769 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322842
VERSION     XP_041322842.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466908.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="transcription factor SPT20 homolog isoform X4"
                     /calculated_mol_wt=83554
     Region          82..219
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..769
                     /gene="SUPT20H"
                     /coded_by="XM_041466908.1:84..2393"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 qklrrnvnll eklvmqetls clvvnlypgn egyslmlrgk ngsdsetirl pyeegelley
      121 ldaeelppil vdlleksqvn ifhcgcviae irdyrqsgnm ksptyqskhi llrptmqtli
      181 cdvhsitsdn hkwtqedkll lesqlilata eplcldpsia vtcttnrlly nkqkmntrpm
      241 krcfkrysrs slnrqqevah ystppqlrll dylqkrkerk taqqydlkis kagncvdmwk
      301 qnpcyltaps evdvekyakv eksiksddsq ptvwpahemk ddyvfecevg nqvqktklti
      361 fqslgnplyy gkiqtlkgde endnlltpsq fligsktdae rvvnqyqelv qneakctvkm
      421 fhnssgsvsr lspgkemeqp esvsgsvqss vlgkgvkhrp ppiklpsssg ssssgnifss
      481 qqssghlksp tppppskppg lsrkqsmdln qvsmlspaam spasssqrsg tpkpstptpt
      541 ntpsstphpp daqsstpitl satptpqdsg ftpqptlltp faqqqmslsq alpvmtipls
      601 tmvtsittgt tstqvmanpa glnfinvvgs vcgaqslmsg snpmlgcntg aiapaginls
      661 gilppgglvp salpaamqsa sqagspfglk ntsnlrplnl lqgsdqgpsn qdqalsaqqa
      721 avinltgvgn fmqpqatvai laasngygsg sstssssass ttfrqplkk
//
LOCUS       XP_041322843             768 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322843
VERSION     XP_041322843.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466909.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..768
                     /product="transcription factor SPT20 homolog isoform X5"
                     /calculated_mol_wt=83369
     Region          81..218
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..768
                     /gene="SUPT20H"
                     /coded_by="XM_041466909.1:84..2390"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 klrrnvnlle klvmqetlsc lvvnlypgne gyslmlrgkn gsdsetirlp yeegelleyl
      121 daeelppilv dlleksqvni fhcgcviaei rdyrqsgnmk sptyqskhil lrptmqtlic
      181 dvhsitsdnh kwtqedklll esqlilatae plcldpsiav tcttnrllyn kqkmntrpmk
      241 rcfkrysrss lnrqqevahy stppqlrlld ylqkrkerkt aqqydlkisk agncvdmwkq
      301 npcyltapse vdvekyakve ksiksddsqp tvwpahemkd dyvfecevgn qvqktkltif
      361 qslgnplyyg kiqtlkgdee ndnlltpsqf ligsktdaer vvnqyqelvq neakctvkmf
      421 hnssgsvsrl spgkemepes vsgsvqssvl gkgvkhrppp iklpsssgss ssgnifssqq
      481 ssghlksptp pppskppgls rkqsmdlnqv smlspaamsp asssqrsgtp kpstptptnt
      541 psstphppda qsstpitlsa tptpqdsgft pqptlltpfa qqqmslsqal pvmtiplstm
      601 vtsittgtts tqvmanpagl nfinvvgsvc gaqslmsgsn pmlgcntgai apaginlsgi
      661 lppgglvpsa lpaamqsasq agspfglknt snlrplnllq gsdqgpsnqd qalsaqqaav
      721 inltgvgnfm qpqatavail aasngygsgs stssssasst tfrqplkk
//
LOCUS       XP_041322845             689 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322845
VERSION     XP_041322845.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466911.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..689
                     /product="transcription factor SPT20 homolog isoform X6"
                     /calculated_mol_wt=75340
     Region          82..219
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..689
                     /gene="SUPT20H"
                     /coded_by="XM_041466911.1:84..2153"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 qklrrnvnll eklvmqetls clvvnlypgn egyslmlrgk ngsdsetirl pyeegelley
      121 ldaeelppil vdlleksqvn ifhcgcviae irdyrqsgnm ksptyqskhi llrptmqtli
      181 cdvhsitsdn hkwtqedkll lesqlilata eplcldpsia vtcttnrlly nkqkmntrpm
      241 krcfkrysrs slnrqqevah ystppqlrll dylqkrkerk taqqydlkis kagncvdmwk
      301 qnpcyltaps evdvekyakv eksiksddsq ptvwpahemk ddyvfecevg nqvqktklti
      361 fqslgnplyy gkiqtlkgde endnlltpsq fligsktdae rvvnqyqelv qneakctvkm
      421 fhnssgsvsr lspgkemeqp esvsgsvqss vlgkgvkhrp ppiklpsssg ssssgnifss
      481 qqssghlksp tppppskppg lsrkqsmdln qvsmlspaam spasssqrtt stqvmanpag
      541 lnfinvvgsv cgaqslmsgs npmlgcntga iapaginlsg ilppgglvps alpaamqsas
      601 qagspfglkn tsnlrplnll qgsdqgpsnq dqalsaqqaa vinltgvgnf mqpqatavai
      661 laasngygsg sstssssass ttfrqplkk
//
LOCUS       XP_041322846             688 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322846
VERSION     XP_041322846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466912.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="transcription factor SPT20 homolog isoform X7"
                     /calculated_mol_wt=75212
     Region          82..219
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..688
                     /gene="SUPT20H"
                     /coded_by="XM_041466912.1:84..2150"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 qklrrnvnll eklvmqetls clvvnlypgn egyslmlrgk ngsdsetirl pyeegelley
      121 ldaeelppil vdlleksqvn ifhcgcviae irdyrqsgnm ksptyqskhi llrptmqtli
      181 cdvhsitsdn hkwtqedkll lesqlilata eplcldpsia vtcttnrlly nkqkmntrpm
      241 krcfkrysrs slnrqqevah ystppqlrll dylqkrkerk taqqydlkis kagncvdmwk
      301 qnpcyltaps evdvekyakv eksiksddsq ptvwpahemk ddyvfecevg nqvqktklti
      361 fqslgnplyy gkiqtlkgde endnlltpsq fligsktdae rvvnqyqelv qneakctvkm
      421 fhnssgsvsr lspgkemepe svsgsvqssv lgkgvkhrpp piklpsssgs sssgnifssq
      481 qssghlkspt ppppskppgl srkqsmdlnq vsmlspaams passsqrtts tqvmanpagl
      541 nfinvvgsvc gaqslmsgsn pmlgcntgai apaginlsgi lppgglvpsa lpaamqsasq
      601 agspfglknt snlrplnllq gsdqgpsnqd qalsaqqaav inltgvgnfm qpqatavail
      661 aasngygsgs stssssasst tfrqplkk
//
LOCUS       XP_041322847             687 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SPT20 homolog isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322847
VERSION     XP_041322847.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466913.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="transcription factor SPT20 homolog isoform X8"
                     /calculated_mol_wt=75084
     Region          81..218
                     /region_name="Spt20"
                     /note="Spt20 family; pfam12090"
                     /db_xref="CDD:463459"
     CDS             1..687
                     /gene="SUPT20H"
                     /coded_by="XM_041466913.1:84..2147"
                     /db_xref="GeneID:121353241"
ORIGIN      
        1 masttmqqal elaldraeyi iesarqrppk rkylssgrks vfqklydlyi eecekepeik
       61 klrrnvnlle klvmqetlsc lvvnlypgne gyslmlrgkn gsdsetirlp yeegelleyl
      121 daeelppilv dlleksqvni fhcgcviaei rdyrqsgnmk sptyqskhil lrptmqtlic
      181 dvhsitsdnh kwtqedklll esqlilatae plcldpsiav tcttnrllyn kqkmntrpmk
      241 rcfkrysrss lnrqqevahy stppqlrlld ylqkrkerkt aqqydlkisk agncvdmwkq
      301 npcyltapse vdvekyakve ksiksddsqp tvwpahemkd dyvfecevgn qvqktkltif
      361 qslgnplyyg kiqtlkgdee ndnlltpsqf ligsktdaer vvnqyqelvq neakctvkmf
      421 hnssgsvsrl spgkemepes vsgsvqssvl gkgvkhrppp iklpsssgss ssgnifssqq
      481 ssghlksptp pppskppgls rkqsmdlnqv smlspaamsp asssqrttst qvmanpagln
      541 finvvgsvcg aqslmsgsnp mlgcntgaia paginlsgil ppgglvpsal paamqsasqa
      601 gspfglknts nlrplnllqg sdqgpsnqdq alsaqqaavi nltgvgnfmq pqatavaila
      661 asngygsgss tssssasstt frqplkk
//
LOCUS       XP_041322848             278 aa            linear   VRT 06-MAY-2021
DEFINITION  exosome complex component RRP43, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041322848
VERSION     XP_041322848.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466914.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..278
                     /product="exosome complex component RRP43"
     Region          8..268
                     /region_name="RNase_PH_RRP43"
                     /note="RRP43 subunit of eukaryotic exosome; cd11369"
                     /db_xref="CDD:206774"
     Site            order(46,48,63,65..67,82,84,89,106,109,113,135,140,145,
                     163..165,194,234..245,250,254)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:206774"
     CDS             1..278
                     /gene="EXOSC8"
                     /coded_by="XM_041466914.1:<1..837"
                     /db_xref="GeneID:121353242"
ORIGIN      
        1 tslsicsrtv epleyyrrfl kencrpdgre lgefrtttvn igsittadgs alvklgnttv
       61 icgvkaelaa pavesankgy ivpnvelpsl caerfrsgpp geeaqaasqf iadviensqm
      121 ivkedlcian gklawvlycd iicldydgnl ldasvfalla alknvqlplv tineetglse
      181 vnlkqknpli irkhpvatsf avfddtlliv dptaeeedla tgtvtivtde egrlcsvhkp
      241 ggspltgakl qdcitraitr hkevkklidk viksitpk
//
LOCUS       XP_041322849            1242 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol kinase eta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322849
VERSION     XP_041322849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1242
                     /product="diacylglycerol kinase eta isoform X1"
                     /calculated_mol_wt=138203
     Region          84..180
                     /region_name="PH_DGK_type2"
                     /note="Type 2 Diacylglycerol kinase Pleckstrin homology
                     (PH) domain; cd13274"
                     /db_xref="CDD:270093"
     Region          164..249
                     /region_name="C1_DGKeta_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase eta (DAG kinase
                     eta) and similar proteins; cd20848"
                     /db_xref="CDD:410398"
     Region          260..321
                     /region_name="C1_DGKeta_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase eta (DAG kinase
                     eta) and similar proteins; cd20894"
                     /db_xref="CDD:410444"
     Region          352..474
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          791..948
                     /region_name="DAGKa"
                     /note="Diacylglycerol kinase accessory domain (presumed);
                     smart00045"
                     /db_xref="CDD:214486"
     Region          1169..1233
                     /region_name="SAM_DGK-eta"
                     /note="SAM domain of diacylglycerol kinase eta; cd09576"
                     /db_xref="CDD:188975"
     Site            order(1196..1200,1206..1208,1210..1211,1214)
                     /site_type="other"
                     /note="putative homooligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188975"
     Site            order(1209,1213,1218..1222,1224..1225,1228)
                     /site_type="other"
                     /note="putative homooligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188975"
     CDS             1..1242
                     /gene="DGKH"
                     /coded_by="XM_041466915.1:122..3850"
                     /db_xref="GeneID:121353243"
ORIGIN      
        1 meehgypsys arspaweele sgkmagaesg msgagiplqp qpqppaaaag padessdseg
       61 ehegpqklir kvstsgqirs ktsikeglll kqtssfqrwk kryfklrgrt lyyakdsksl
      121 ifdevdlsda svaesstknv nnsftiitpf rrlilcaenr kemedwissl ksvqsrehye
      181 taqfnvehfs gmhnwyacsh arptfcnvcr eslsgvtshg lscevckfka hkrcavratn
      241 nckwttlasi gkdiiededg iamphqwleg nlpvsakcav cdktcgsvlr lqdwkclwck
      301 amvhtackdl yprkcplgqc kvsiipptal nsidsdgfwk atcppscasp llvfvnsksg
      361 dnqgvkflrr fkqslnpaqv fdlmnggphl glrlfqkfdn frilvcggdg svgwvlseid
      421 klslhkqcql gvlplgtgnd larvlgwggs cdddtqlpqi leklerastk mldrwsimsy
      481 elklpskpsi lpvtaeesee cqisayedsv aahlakilns dqhsvvissa kilcetvkdf
      541 vakigktyek pmenaeeada maikcselne kldlllqalh teaqaapilp giaspiveee
      601 peefsseesl seskeqlaec vskssqklfk prqqlmlran slkkavrqii eqaekvvdeq
      661 nahseeqvnq spveyskeld eskeeekeed tkelespstk taprspdrrt srgihsqtgs
      721 fsapalaask enlpvlntri icpglragla asiagssiis kmllanidpf gatpfidpdp
      781 dslegysekc vmnnyfgigl dakislefnn kreehpekcr srtknmmwyg vlgtkellqr
      841 tyknleqkvq lecdgqyipl pslqgiavln ipsyaggtnf wggtkeddif gapsfddkil
      901 evvavfgsmq mavsrviklq hhriaqcrsv kitilgdegv pvqvdgeawi qppgvikiih
      961 knraqmltrd rafentlksw edkqkydsck pvirsplypq qavelateee vaqiqlcsqa
     1021 aeelitrice aakvhglleq elahavnacs halnkanprf pesltrntam eiavnvkalh
     1081 netesllvgr vplqleaphe ellsdalhsv eielrklaei pwlyyvfqpn ddedppldya
     1141 krnnrstvfr ivpkfkkeki qkhktspqpv qkwgtdevaa wldllslgey keifishdir
     1201 gsellhlerr dlkdlgitkv ghmkrilqgi kelskntpls ev
//
LOCUS       XP_041322850            1241 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol kinase eta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322850
VERSION     XP_041322850.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466916.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1241
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1241
                     /product="diacylglycerol kinase eta isoform X2"
                     /calculated_mol_wt=138075
     Region          84..180
                     /region_name="PH_DGK_type2"
                     /note="Type 2 Diacylglycerol kinase Pleckstrin homology
                     (PH) domain; cd13274"
                     /db_xref="CDD:270093"
     Region          164..249
                     /region_name="C1_DGKeta_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase eta (DAG kinase
                     eta) and similar proteins; cd20848"
                     /db_xref="CDD:410398"
     Region          260..321
                     /region_name="C1_DGKeta_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase eta (DAG kinase
                     eta) and similar proteins; cd20894"
                     /db_xref="CDD:410444"
     Region          352..474
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          791..948
                     /region_name="DAGKa"
                     /note="Diacylglycerol kinase accessory domain (presumed);
                     smart00045"
                     /db_xref="CDD:214486"
     Region          1168..1232
                     /region_name="SAM_DGK-eta"
                     /note="SAM domain of diacylglycerol kinase eta; cd09576"
                     /db_xref="CDD:188975"
     Site            order(1195..1199,1205..1207,1209..1210,1213)
                     /site_type="other"
                     /note="putative homooligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188975"
     Site            order(1208,1212,1217..1221,1223..1224,1227)
                     /site_type="other"
                     /note="putative homooligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188975"
     CDS             1..1241
                     /gene="DGKH"
                     /coded_by="XM_041466916.1:122..3847"
                     /db_xref="GeneID:121353243"
ORIGIN      
        1 meehgypsys arspaweele sgkmagaesg msgagiplqp qpqppaaaag padessdseg
       61 ehegpqklir kvstsgqirs ktsikeglll kqtssfqrwk kryfklrgrt lyyakdsksl
      121 ifdevdlsda svaesstknv nnsftiitpf rrlilcaenr kemedwissl ksvqsrehye
      181 taqfnvehfs gmhnwyacsh arptfcnvcr eslsgvtshg lscevckfka hkrcavratn
      241 nckwttlasi gkdiiededg iamphqwleg nlpvsakcav cdktcgsvlr lqdwkclwck
      301 amvhtackdl yprkcplgqc kvsiipptal nsidsdgfwk atcppscasp llvfvnsksg
      361 dnqgvkflrr fkqslnpaqv fdlmnggphl glrlfqkfdn frilvcggdg svgwvlseid
      421 klslhkqcql gvlplgtgnd larvlgwggs cdddtqlpqi leklerastk mldrwsimsy
      481 elklpskpsi lpvtaeesee cqisayedsv aahlakilns dqhsvvissa kilcetvkdf
      541 vakigktyek pmenaeeada maikcselne kldlllqalh teaqaapilp giaspiveee
      601 peefsseesl seskeqlaec vskssqklfk prqqlmlran slkkavrqii eqaekvvdeq
      661 nahseeqvnq spveyskeld eskeeekeed tkelespstk taprspdrrt srgihsqtgs
      721 fsapalaask enlpvlntri icpglragla asiagssiis kmllanidpf gatpfidpdp
      781 dslegysekc vmnnyfgigl dakislefnn kreehpekcr srtknmmwyg vlgtkellqr
      841 tyknleqkvq lecdgqyipl pslqgiavln ipsyaggtnf wggtkeddif gapsfddkil
      901 evvavfgsmq mavsrviklq hhriaqcrsv kitilgdegv pvqvdgeawi qppgvikiih
      961 knraqmltrd rafentlksw edkqkydsck pvirsplypq qavelateee vaqiqlcsqa
     1021 aeelitrice aakvhglleq elahavnacs halnkanprf pesltrntam eiavnvkalh
     1081 netesllvgr vplleaphee llsdalhsve ielrklaeip wlyyvfqpnd dedppldyak
     1141 rnnrstvfri vpkfkkekiq khktspqpvq kwgtdevaaw ldllslgeyk eifishdirg
     1201 sellhlerrd lkdlgitkvg hmkrilqgik elskntplse v
//
LOCUS       XP_041322851            1186 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol kinase eta isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322851
VERSION     XP_041322851.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466917.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1186
                     /product="diacylglycerol kinase eta isoform X3"
                     /calculated_mol_wt=131486
     Region          84..180
                     /region_name="PH_DGK_type2"
                     /note="Type 2 Diacylglycerol kinase Pleckstrin homology
                     (PH) domain; cd13274"
                     /db_xref="CDD:270093"
     Region          164..249
                     /region_name="C1_DGKeta_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase eta (DAG kinase
                     eta) and similar proteins; cd20848"
                     /db_xref="CDD:410398"
     Region          260..321
                     /region_name="C1_DGKeta_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase eta (DAG kinase
                     eta) and similar proteins; cd20894"
                     /db_xref="CDD:410444"
     Region          352..474
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          791..948
                     /region_name="DAGKa"
                     /note="Diacylglycerol kinase accessory domain (presumed);
                     smart00045"
                     /db_xref="CDD:214486"
     CDS             1..1186
                     /gene="DGKH"
                     /coded_by="XM_041466917.1:122..3682"
                     /db_xref="GeneID:121353243"
ORIGIN      
        1 meehgypsys arspaweele sgkmagaesg msgagiplqp qpqppaaaag padessdseg
       61 ehegpqklir kvstsgqirs ktsikeglll kqtssfqrwk kryfklrgrt lyyakdsksl
      121 ifdevdlsda svaesstknv nnsftiitpf rrlilcaenr kemedwissl ksvqsrehye
      181 taqfnvehfs gmhnwyacsh arptfcnvcr eslsgvtshg lscevckfka hkrcavratn
      241 nckwttlasi gkdiiededg iamphqwleg nlpvsakcav cdktcgsvlr lqdwkclwck
      301 amvhtackdl yprkcplgqc kvsiipptal nsidsdgfwk atcppscasp llvfvnsksg
      361 dnqgvkflrr fkqslnpaqv fdlmnggphl glrlfqkfdn frilvcggdg svgwvlseid
      421 klslhkqcql gvlplgtgnd larvlgwggs cdddtqlpqi leklerastk mldrwsimsy
      481 elklpskpsi lpvtaeesee cqisayedsv aahlakilns dqhsvvissa kilcetvkdf
      541 vakigktyek pmenaeeada maikcselne kldlllqalh teaqaapilp giaspiveee
      601 peefsseesl seskeqlaec vskssqklfk prqqlmlran slkkavrqii eqaekvvdeq
      661 nahseeqvnq spveyskeld eskeeekeed tkelespstk taprspdrrt srgihsqtgs
      721 fsapalaask enlpvlntri icpglragla asiagssiis kmllanidpf gatpfidpdp
      781 dslegysekc vmnnyfgigl dakislefnn kreehpekcr srtknmmwyg vlgtkellqr
      841 tyknleqkvq lecdgqyipl pslqgiavln ipsyaggtnf wggtkeddif gapsfddkil
      901 evvavfgsmq mavsrviklq hhriaqcrsv kitilgdegv pvqvdgeawi qppgvikiih
      961 knraqmltrd rafentlksw edkqkydsck pvirsplypq qavelateee vaqiqlcsqa
     1021 aeelitrice aakvhglleq elahavnacs halnkanprf pesltrntam eiavnvkalh
     1081 netesllvgr vplqleaphe ellsdalhsv eielrklaei pwlyyvfqpn ddedppldya
     1141 krnnrstvfr ivpkfkkeki qkhktspqpg pgdnesgsye anspgn
//
LOCUS       XP_041322852            1051 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol kinase eta isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322852
VERSION     XP_041322852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466918.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1051
                     /product="diacylglycerol kinase eta isoform X4"
                     /calculated_mol_wt=116940
     Region          <1..62
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          69..130
                     /region_name="C1_DGKeta_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase eta (DAG kinase
                     eta) and similar proteins; cd20894"
                     /db_xref="CDD:410444"
     Region          161..283
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          600..757
                     /region_name="DAGKa"
                     /note="Diacylglycerol kinase accessory domain (presumed);
                     smart00045"
                     /db_xref="CDD:214486"
     Region          978..1042
                     /region_name="SAM_DGK-eta"
                     /note="SAM domain of diacylglycerol kinase eta; cd09576"
                     /db_xref="CDD:188975"
     Site            order(1005..1009,1015..1017,1019..1020,1023)
                     /site_type="other"
                     /note="putative homooligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188975"
     Site            order(1018,1022,1027..1031,1033..1034,1037)
                     /site_type="other"
                     /note="putative homooligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188975"
     CDS             1..1051
                     /gene="DGKH"
                     /coded_by="XM_041466918.1:145..3300"
                     /db_xref="GeneID:121353243"
ORIGIN      
        1 mhnwyacsha rptfcnvcre slsgvtshgl scevckfkah krcavratnn ckwttlasig
       61 kdiiededgi amphqwlegn lpvsakcavc dktcgsvlrl qdwkclwcka mvhtackdly
      121 prkcplgqck vsiipptaln sidsdgfwka tcppscaspl lvfvnsksgd nqgvkflrrf
      181 kqslnpaqvf dlmnggphlg lrlfqkfdnf rilvcggdgs vgwvlseidk lslhkqcqlg
      241 vlplgtgndl arvlgwggsc dddtqlpqil eklerastkm ldrwsimsye lklpskpsil
      301 pvtaeeseec qisayedsva ahlakilnsd qhsvvissak ilcetvkdfv akigktyekp
      361 menaeeadam aikcselnek ldlllqalht eaqaapilpg iaspiveeep eefsseesls
      421 eskeqlaecv skssqklfkp rqqlmlrans lkkavrqiie qaekvvdeqn ahseeqvnqs
      481 pveyskelde skeeekeedt kelespstkt aprspdrrts rgihsqtgsf sapalaaske
      541 nlpvlntrii cpglraglaa siagssiisk mllanidpfg atpfidpdpd slegysekcv
      601 mnnyfgigld akislefnnk reehpekcrs rtknmmwygv lgtkellqrt yknleqkvql
      661 ecdgqyiplp slqgiavlni psyaggtnfw ggtkeddifg apsfddkile vvavfgsmqm
      721 avsrviklqh hriaqcrsvk itilgdegvp vqvdgeawiq ppgvikiihk nraqmltrdr
      781 afentlkswe dkqkydsckp virsplypqq avelateeev aqiqlcsqaa eelitricea
      841 akvhglleqe lahavnacsh alnkanprfp esltrntame iavnvkalhn etesllvgrv
      901 plqleaphee llsdalhsve ielrklaeip wlyyvfqpnd dedppldyak rnnrstvfri
      961 vpkfkkekiq khktspqpvq kwgtdevaaw ldllslgeyk eifishdirg sellhlerrd
     1021 lkdlgitkvg hmkrilqgik elskntplse v
//
LOCUS       XP_041322853             924 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol kinase eta isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322853
VERSION     XP_041322853.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466919.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..924
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..924
                     /product="diacylglycerol kinase eta isoform X5"
                     /calculated_mol_wt=101962
     Region          <37..59
                     /region_name="C1"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     superfamily; cl00040"
                     /db_xref="CDD:412127"
     Region          90..212
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          529..686
                     /region_name="DAGKa"
                     /note="Diacylglycerol kinase accessory domain (presumed);
                     smart00045"
                     /db_xref="CDD:214486"
     CDS             1..924
                     /gene="DGKH"
                     /coded_by="XM_041466919.1:1..2775"
                     /db_xref="GeneID:121353243"
ORIGIN      
        1 mwnisqgcit gtpaptpdpp svtcaerasl eslltacpvk vhtackdlyp rkcplgqckv
       61 siipptalns idsdgfwkat cppscaspll vfvnsksgdn qgvkflrrfk qslnpaqvfd
      121 lmnggphlgl rlfqkfdnfr ilvcggdgsv gwvlseidkl slhkqcqlgv lplgtgndla
      181 rvlgwggscd ddtqlpqile klerastkml drwsimsyel klpskpsilp vtaeeseecq
      241 isayedsvaa hlakilnsdq hsvvissaki lcetvkdfva kigktyekpm enaeeadama
      301 ikcselnekl dlllqalhte aqaapilpgi aspiveeepe efsseeslse skeqlaecvs
      361 kssqklfkpr qqlmlransl kkavrqiieq aekvvdeqna hseeqvnqsp veyskeldes
      421 keeekeedtk elespstkta prspdrrtsr gihsqtgsfs apalaasken lpvlntriic
      481 pglraglaas iagssiiskm llanidpfga tpfidpdpds legysekcvm nnyfgiglda
      541 kislefnnkr eehpekcrsr tknmmwygvl gtkellqrty knleqkvqle cdgqyiplps
      601 lqgiavlnip syaggtnfwg gtkeddifga psfddkilev vavfgsmqma vsrviklqhh
      661 riaqcrsvki tilgdegvpv qvdgeawiqp pgvikiihkn raqmltrdra fentlkswed
      721 kqkydsckpv irsplypqqa velateeeva qiqlcsqaae elitriceaa kvhglleqel
      781 ahavnacsha lnkanprfpe sltrntamei avnvkalhne tesllvgrvp lqleapheel
      841 lsdalhsvei elrklaeipw lyyvfqpndd edppldyakr nnrstvfriv pkfkkekiqk
      901 hktspqpgpg dnesgsyean spgn
//
LOCUS       XP_041322855             686 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat and calponin homology domain-containing protein
            1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322855
VERSION     XP_041322855.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466921.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..686
                     /product="leucine-rich repeat and calponin homology
                     domain-containing protein 1"
                     /calculated_mol_wt=76443
     Region          55..78
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <75..392
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          79..101
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          102..124
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          125..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          147..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          170..192
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          193..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          215..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          238..257
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          566..676
                     /region_name="CH_LRCH2"
                     /note="calponin homology (CH) domain found in leucine-rich
                     repeat and calponin homology domain-containing protein 2;
                     cd21271"
                     /db_xref="CDD:409120"
     Site            order(571,575,630,632..633,636..637,639,649..657,663,
                     665..666,668..669,672..673,676)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409120"
     CDS             1..686
                     /gene="LRCH1"
                     /coded_by="XM_041466921.1:84..2144"
                     /db_xref="GeneID:121353244"
ORIGIN      
        1 matlggesqp fpsaalaaaa gvggggggsg alflqaplnr gleraleeaa hsgglnlsgr
       61 klkefprsaa alshdlsdtv radlsknrlt evptelchfv sletlnlyhn cikvipdaiv
      121 nlqmltylnl srnqlsslpa clcglplkvl iasnnklgsl peeigqlkql meldvscnei
      181 talpqqigql kslkelnvrr nylevlpqel vqlplvkfdf scnkvlvipi cfrkmvqlqv
      241 lllennplqs ppaqictkgk vhifkyltvq acqiktadsl ylnaiepqhl pqpveesidd
      301 iypskkdsds gvgsdngdkr lsatepsded tisfnvpmsd ileedhiikd dsghhtnsrk
      361 vefhqgssht fvndksqetg nqfdeqdtlt tqfmsyiksr aaecdellri eedtqwqade
      421 ilnlseeqti diamieqlre avdllqdsns gqiqmdmssl gqrenpeeel efqrrrelim
      481 ekakpeartc eqgekwslsq ndlfvwntsg qtshnedkdk sptmspttnt tipfglkprs
      541 vflrpqrnle sidpqftirr kmeqmreere lveqlrenie trlkiclped lgsalmdgvv
      601 lchlvnhvrp rsvgsihvps pavpklsmak crrnvenfld acrklgipee klclphhile
      661 ekglvkvsit vqalldvttv kqalft
//
LOCUS       XP_041322856             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322856
VERSION     XP_041322856.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466922.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466922.1:27..875"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322857             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322857
VERSION     XP_041322857.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466923.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466923.1:109..957"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322858             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322858
VERSION     XP_041322858.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466924.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466924.1:44..892"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322859             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322859
VERSION     XP_041322859.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466925.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466925.1:30..878"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322860             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322860
VERSION     XP_041322860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466926.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466926.1:27..875"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322861             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322861
VERSION     XP_041322861.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466927.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466927.1:27..875"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322862             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322862
VERSION     XP_041322862.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466928.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466928.1:28..876"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322863             282 aa            linear   VRT 06-MAY-2021
DEFINITION  S-formylglutathione hydrolase [Pyrgilauda ruficollis].
ACCESSION   XP_041322863
VERSION     XP_041322863.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466929.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="S-formylglutathione hydrolase"
                     /calculated_mol_wt=31292
     Region          2..281
                     /region_name="PLN02442"
                     /note="S-formylglutathione hydrolase"
                     /db_xref="CDD:178061"
     CDS             1..282
                     /gene="ESD"
                     /coded_by="XM_041466929.1:26..874"
                     /db_xref="GeneID:121353245"
ORIGIN      
        1 malkqvssnk cfegfqkvfe hdsaelkckm kfgiylppka engkcpvlyw lsgltcteqn
       61 fitkaafqqa aaehglivva pdtsprgcni egedeswdfg tgagfyvdat edpwktnyrm
      121 ysyikdelpk linanfptdp ermsifghsm gghgalilal knpgkyksvs afapicnptq
      181 cqwgkkalgg ylgpdaskwe aydatqlvks ysgarldili dqgkddqfls agqllpdnfi
      241 aacterkipv vfrlqqgydh syyfiasfin dhikhhakyl na
//
LOCUS       XP_041322864             389 aa            linear   VRT 06-MAY-2021
DEFINITION  regulatory factor X-associated protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322864
VERSION     XP_041322864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466930.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="regulatory factor X-associated protein"
                     /calculated_mol_wt=40397
     Region          259..362
                     /region_name="RFXA_RFXANK_bdg"
                     /note="Regulatory factor X-associated C-terminal binding
                     domain; pfam15289"
                     /db_xref="CDD:434600"
     CDS             1..389
                     /gene="LOC121353247"
                     /coded_by="XM_041466930.1:1..1170"
                     /db_xref="GeneID:121353247"
ORIGIN      
        1 mapvehqlhe efhkdydlve vsggsnadra dsgsvkpglt tdgypsrpsd fhrsfpsrvs
       61 ttrgqttlav ltqsqalhta dvaiaatqip pqrhrgrcrh yrgpapstar arapcaraca
      121 aaearelrgl vgpgtaalqg spaaaaassa sssssssppe qqqltllvmq pgggeeaaag
      181 aagvvlqpsa dpqlppsasg glmvfyelga agevevgeee veaaggesta sleeleeeea
      241 aaapgaagge aaaggecksc tyegcsettt qvvkqrkpwm ckrhrnkiyk dkykrkksdq
      301 alggggaaaa gggpraedsv egsvsvtkqr tgsigdrpar ptlleqvlnk krlsllrspe
      361 vvqflqkqqq llsqqaleqr qqqfqgapg
//
LOCUS       XP_041322865             210 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial ornithine transporter 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322865
VERSION     XP_041322865.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466931.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="mitochondrial ornithine transporter 1"
                     /calculated_mol_wt=22763
     Region          9..94
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     Region          116..205
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..210
                     /gene="SLC25A15"
                     /coded_by="XM_041466931.1:614..1246"
                     /db_xref="GeneID:121353248"
ORIGIN      
        1 mrinsavqaa idltagaagg tacvatgqpf dtakvkmqtf pnmykglvdc fvktykqvgl
       61 rgfykgttpa lvaniaensv lfmcygfcqq ivrrivgvdr ktklrlvini wfafflgpip
      121 lllsggfggs clwiavypvd cvksriqvls magkqagfmg tfvtvvrteg vlalysgltp
      181 tmirafvang alflayeysr klmmkqidsy
//
LOCUS       XP_041322867             660 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoskeleton-associated protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322867
VERSION     XP_041322867.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466933.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..660
                     /product="cytoskeleton-associated protein 2"
                     /calculated_mol_wt=72951
     Region          304..651
                     /region_name="CKAP2_C"
                     /note="Cytoskeleton-associated protein 2 C-terminus;
                     pfam15297"
                     /db_xref="CDD:464623"
     CDS             1..660
                     /gene="CKAP2"
                     /coded_by="XM_041466933.1:1..1983"
                     /db_xref="GeneID:121353249"
ORIGIN      
        1 mhaelaavqr llagaplrss rtrrattskl qdklqlstsp kpemenkena dkvpweqsiv
       61 nsetnvtfns stdpltsyia gtncnlenqa pqnkvidiks qnvslskail eikrikerhl
      121 taekqnasvi vpkkpalgry rgkviqskin sfwkagkteg eksslpdkkp fpsatkqaan
      181 slstkscntv pktikvannp ksvksngvlp fqskpsdkaa tnsqsglkkq tftvapkkvi
      241 vqkvvggrrp qplkaassnp drkargvkkc adfcedaqpe plarstfaap gtksghnsrm
      301 denrksllpk esaeerrarl dewrasrgkv mrrppirall gpqskseeqe fsaadaekvn
      361 ktlseclhlt kqghhgdear amledlihsi pgvkklakyw iccmhleqtg hlgkliavye
      421 eailagampr eelrhtlvdt iknteglfns dnggtvieah lsevvglsee pnssvepiqe
      481 tfkdgcpddd qkeesdnkae tssevikkee idldlkprge ilpkknkkqk akerakkkgk
      541 cereqkedgi kntaqainsp ekendtsysm rcnppttpyl esvkmhpean dcsakdlkii
      601 tplrysqrir ekmcklpdav kdqdpcvssl eqlgdleska tvfihkqsna lqetsaeiee
//
LOCUS       XP_041322868            1446 aa            linear   VRT 06-MAY-2021
DEFINITION  copper-transporting ATPase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322868
VERSION     XP_041322868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466934.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1446
                     /product="copper-transporting ATPase 2"
                     /calculated_mol_wt=155753
     Region          129..191
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(135..137,140)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     Region          214..277
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(220..222,225)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     Region          322..384
                     /region_name="CopZ"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; COG2608"
                     /db_xref="CDD:442020"
     Region          424..492
                     /region_name="CopZ"
                     /note="Copper chaperone CopZ [Inorganic ion transport and
                     metabolism]; COG2608"
                     /db_xref="CDD:442020"
     Region          548..611
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(554..556,559)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     Region          624..687
                     /region_name="HMA"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; cd00371"
                     /db_xref="CDD:238219"
     Site            order(630..632,635)
                     /site_type="metal-binding"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     Region          709..1324
                     /region_name="P-type_ATPase_Cu-like"
                     /note="P-type heavy metal-transporting ATPase, similar to
                     human copper-transporting ATPases, ATP7A and ATP7B;
                     cd02094"
                     /db_xref="CDD:319783"
     Site            order(1040,1042,1315)
                     /site_type="other"
                     /note="putative Cu binding site [ion binding]"
                     /db_xref="CDD:319783"
     Site            order(1084..1086,1154,1170..1172,1197,1226,1229,1232,1251,
                     1254)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319783"
     CDS             1..1446
                     /gene="ATP7B"
                     /coded_by="XM_041466934.1:1..4341"
                     /db_xref="GeneID:121353250"
ORIGIN      
        1 merkldnkmk relsylatln drnislvsir kqqaacdvpe lliigekskt aspvkassnl
       61 qkeekllpsy smgmtevntd erqalsnids ppgcelkptm khnfafdnmg yeassetmps
      121 ppsqehtvvv nivgmtcqsc vqsiegrisk vkgilrikvs leqnnaiiky lqseispeqi
      181 cqeildmgfd aniaeekltt atvnlpslke avtklrvegm tcqscvtnie gkikklhgva
      241 kikvsldnqe aiiayhpyii qpddlkrhis dlgydctiks ksaplklgal dfqrlqnanp
      301 retpaslesd gldllvpemg statvtlqie gmhckscvrn iegnmsdlpg iksievsleh
      361 khavvqyspd lmtlsalqqa meslppgnfk vsllsssean kaaspsgaft ysvvrqppqg
      421 tthtavikid gmtcnscvqs iegamsqrqg vqhvavslag stgtidydpa vtsgeelraa
      481 iedmgfdasv ltdtatgeqr cqpdaskaav qprapepphq gsssdalpvs phpdgsnqls
      541 gateekcvlq itgmtcascv stiernlqke dgivsvlval magkaeikyk peliqpleia
      601 qliqnlgfea timennaete gqvelliigm tcascvhnie sklmrtngif sasvalatsk
      661 ahilfdpeii gprdiikvik eigfhasvak rapnahnlsh kkeiqqwrks flyslvfgip
      721 vvvimiymqi psgeghgskv leqnlipgls ilnllffilc tfvqflggwy fyvqaykslr
      781 hktanmdvli vlattiayvy scvilivaii ekaekspvtf fdtppmlfvf ialgrwlehi
      841 akgktseala klmslqatea tvvtlgpghs ivreeqvpve lvqrgdiikv vpggkfpvdg
      901 kvidgssmad eslitgepmp vikkpgstvi agsinaygsl lvnathvggd ttlaqivklv
      961 eeaqmskapi qqladkfsgy fvpfiiiist vtlivwitig fvnfdiikky fpnqsknisk
     1021 aeiilrfafq tsitvlsiac pcslglatpt avmvgtgvaa qngilikggk plemahqikt
     1081 vmfdktgtit ygvpkvmrvl lmgdtavlpl kkvlavvgta eassehplgm avtkyckeel
     1141 gteslgyctn fqavpgcgis ckvggveail gtaeegpnkl dasrsgdssa slgdngvits
     1201 lesqdvdftr islvdipvgi kkvfaevlps hkvakvqelq ngkkkvamvg dgvndspala
     1261 kadvgiaigt gtdvaieaad vvlirndlld vvasihlskr tvrririnli laliynllgi
     1321 piaaaylegt sslalwlqsg tcigakvipc ngrdmfsndy kkpdtesyea qaqgrmkplt
     1381 psqisvhigm ddrrrdsskp spwdqtsqvs lsslasdrlp rrngfiqeeg gkwsllinga
     1441 deeqyi
//
LOCUS       XP_041322869             264 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C13orf42 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322869
VERSION     XP_041322869.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466935.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..264
                     /product="uncharacterized protein C13orf42 homolog"
                     /calculated_mol_wt=29999
     CDS             1..264
                     /gene="CUNH13orf42"
                     /coded_by="XM_041466935.1:1..795"
                     /db_xref="GeneID:121353251"
ORIGIN      
        1 mfkkihsifh pnsqrrnvtd dipysdgags avrlirstsm yvlggeqekv seplkkcrst
       61 tsidscfqpk eedrdwmysk tqdclkylqd llalrkkyle ninnlksmhm aadspastrs
      121 sktgkksflp lpskesskss merkgpqsss dvreaiaffd sviadldser wrrvpdvglp
      181 nvdvdfdvat stsehslhsn wilraprrys qdtaqaakqs qrnsqrrttg srkrlerhpm
      241 ylpkavegay stlkfkpktr kkec
//
LOCUS       XP_041322870             314 aa            linear   VRT 06-MAY-2021
DEFINITION  cysteinyl leukotriene receptor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322870
VERSION     XP_041322870.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466936.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="cysteinyl leukotriene receptor 2"
                     /calculated_mol_wt=35366
     Region          34..308
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          36..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          68..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          106..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          151..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          193..216
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          240..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          276..301
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..314
                     /gene="CYSLTR2"
                     /coded_by="XM_041466936.1:1..945"
                     /db_xref="GeneID:121353252"
ORIGIN      
        1 memlaqtmni skvalngsft dsssncsidg fkqviypity lfiffpgavg nslsiyvffq
       61 tsqrtsiniy mqslaisdlm fvstlpfras yfllgshwif gdilcrimty tlymnmycsi
      121 yfltmlsvvr fiaivhpfkh gkvtntkcar itcvaiwifv laaaspllnk gvagyrnpdk
      181 cldlhpssth rllmmnsfvl ivgfilpfct ilfcyvfair vllksssvqs rraishrkal
      241 ltivitlils licflpyhil rtvhlmyssc sqaslhkalv vtlclaatns cldpflyyfa
      301 aenfkakirs lccw
//
LOCUS       XP_041322871             665 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear fragile X mental retardation-interacting protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322871
VERSION     XP_041322871.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466937.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..665
                     /product="nuclear fragile X mental retardation-interacting
                     protein 1"
                     /calculated_mol_wt=73716
     Region          <93..>240
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          243..266
                     /region_name="zf-C2H2_jaz"
                     /note="Zinc-finger double-stranded RNA-binding; pfam12171"
                     /db_xref="CDD:432381"
     Region          284..337
                     /region_name="NUFIP1"
                     /note="Nuclear fragile X mental retardation-interacting
                     protein 1 (NUFIP1); pfam10453"
                     /db_xref="CDD:463096"
     CDS             1..665
                     /gene="NUFIP1"
                     /coded_by="XM_041466937.1:1..1998"
                     /db_xref="GeneID:121353253"
ORIGIN      
        1 marpdvtrsa aaaggphvve rehraagsah pgrlsgldmn pfawyppppp glpppgippp
       61 ffcpppswdt sfwaapvpyp ppgrypppdg tyasaesysq pksysqpaes ysqpadsypp
      121 aegysdpaqs ippaesysqp aesypqpaqn fsqpegfsqp aegyppaqsy pqpesflpph
      181 sysspaawfp paygarpqgp haggngnfsq kwqgkqappf skhcqeennk pktrkkkepv
      241 fshycdtcdr gyknqekyde hisqhkqcse egcnfsahek ivqihwknah apgakrikld
      301 speeiarwre erkrnfptla nierkkemqt qkeergevlt tqqfgkmkgm wkppengeal
      361 ghqrrhrrrq wrpfwkkfrk nggdyhgpgt qneaiapens kcekeheqqn alagqayekd
      421 vdplgllang dvesdkdeaa eedgrlgttv vprqvtsals alsvnygsas dsepeeipvk
      481 tatkaernqa alrntpqttp apqsrkpnqn rpecagttlr ssnsnarapr gpekwgrktl
      541 prlpkrrptl lemllaqdir hernvilqcv rylirnnmfg lhlktepqae aeteqssapa
      601 aepsmetpdg sncscssdlq leggqedall itrgerepvd qtsqmaqlad edtwetpsiq
      661 cegap
//
LOCUS       XP_041322872            1884 aa            linear   VRT 06-MAY-2021
DEFINITION  von Willebrand factor A domain-containing protein 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322872
VERSION     XP_041322872.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466938.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1884
                     /product="von Willebrand factor A domain-containing
                     protein 8"
                     /calculated_mol_wt=210994
     Region          99..255
                     /region_name="AAA_5"
                     /note="AAA domain (dynein-related subfamily); pfam07728"
                     /db_xref="CDD:400191"
     Region          436..597
                     /region_name="AAA_5"
                     /note="AAA domain (dynein-related subfamily); pfam07728"
                     /db_xref="CDD:400191"
     Site            441..448
                     /site_type="other"
                     /note="Walker A motif"
                     /db_xref="CDD:99707"
     Site            order(442..449,508)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:99707"
     Site            504..509
                     /site_type="other"
                     /note="Walker B motif"
                     /db_xref="CDD:99707"
     Region          749..896
                     /region_name="AAA_5"
                     /note="AAA domain (dynein-related subfamily); pfam07728"
                     /db_xref="CDD:400191"
     Region          1692..1881
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(1699,1782,1810)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..1884
                     /gene="VWA8"
                     /coded_by="XM_041466938.1:94..5748"
                     /db_xref="GeneID:121353255"
ORIGIN      
        1 mpsrvlclgg gaggpaarrv rlllrqvvgg gaaaarygrs evralhssgd tvtigdvsfk
       61 lktpknpelv pqnymtesla qsvvhhlrwi mqkdllgqdv fligppgplr rsiamqylel
      121 tkreveyial srdttetdlk qrreirdgsa fyldqcavra ategrilvle glekaernvl
      181 pvlnnllenr emqledgrfl msadrydkll kehtkselda wkivrvsedf rvialglpvp
      241 kysgnpldpp lrsrfqardv yhlpfkdhlq llysigsnis terisqllsf attlcsqess
      301 tlglpdfpld slsaavqild sfpmmsvqhv idrlypyhlf lgkegrtavk dmlkrfelqd
      361 sekqlfprki trvesvygnk pfkadvtvqi gekevtfqvp agtgmlknhs rsdtfirtss
      421 hnqllaemmq shmvkdmcli ggkgcgktvi akefadilgy siepimlyqd mtardllqqr
      481 ytlpngdtaw rpsplvtaal egklvlldgi hrinpgtlav lqrlihdrel tlydgtrllr
      541 edryqnlkee lqlsdeklqe rsifpihpsf rivvlaeppv igsstqqwlg pefltlflfh
      601 nvrslsksee ievikqmipn vpsvavekll svthklretn dataqslasf lstrqllric
      661 rrlsqypdes lydavnkacl srflpnlars alhknlqdsg ietspddtek legkdytfvs
      721 ltlfyqnvll lshmmvmedm lkdfllgehl llvgnqgvgk nkvvdrflhl lnrpreylql
      781 hrdttvqslt lqpsvkdgli iyedsplvka vkfghilvid eadkaptnvt cilktlvesg
      841 emvlsdgrri vanhahvegr envivihpdf rmivlanrpg fpflgndffg tlgdifscha
      901 vdnpkpqsel amlkqygpdv peailqklva afgelrslad qgiinypyst revvnivkhl
      961 qkfpseglan vvrnvfdfds ynsemreily ntlhkygipi gakptnvqla kelplpdhkf
     1021 vgywkvdqpg naqkkmlcps etqkidvkgp vhlniqgfpl erhearsisf teelafwtlp
     1081 ldeinlvcdv tvtkeeehkn vlyvttcnpv slyfmnissk tgyfvdlydl fprtvgsvwq
     1141 pfvtaaplgn plkgqvvlhe eesnvvllld tsngalrrll lspdaqdspk rtswwsnkee
     1201 ksnykmcref shknwlvfyk etgnhlivld vlegqahtis lpislksvfl vaedrwllve
     1261 netnkkfllt khahmeaqgs evcqlhalne epadmgfglt tvselsvpha vstdqlssen
     1321 lsaavgqkis spnrifsdeh nyativigfp dllspsevys wkrnsslshk raspsdplyy
     1381 gaqrktgaak qtncvtllas nqivrilapg dvplkdiypk dvtpppaagy levtdlnskk
     1441 ikyiaiprsq slspytswls kisdadalla plgkvglvtv dmgggvrlwe tgleslqqsl
     1501 qdwrnmigqe dgrpvqitie resgldvssp khgkvdpdnm phvggntwag gtggrdtagl
     1561 ggkggpyrld aghrvyqvsq aekdavpeev kraaremaek afkqrlkeiq mseydastye
     1621 rfsgavrrqv qslriildnl qakgkerqwl rhqavgeldd akiidgltge kaiykrrgel
     1681 epqpgspqqk pkrlrlvvdv sgsmyrfngv dgrlersmea vcmvmeafen yehkfkydiv
     1741 ghsgdgfnia lvgsdevpkn nkqrleilkt mhahaqfcms gdhtlegteh aireiakeea
     1801 deyfvivlsd anlerygipp skfaqvlttn tqvnafaifi gslgdqadrl qrtlpagrsf
     1861 iamdtkeipq ilqqiftstl lssa
//
LOCUS       XP_041322873             490 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactomedin-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322873
VERSION     XP_041322873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466939.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="olfactomedin-4"
                     /calculated_mol_wt=55925
     Region          <81..>219
                     /region_name="CusB_dom_1"
                     /note="Cation efflux system protein CusB domain 1;
                     cl46872"
                     /db_xref="CDD:481212"
     Region          234..488
                     /region_name="OLF"
                     /note="Olfactomedin-like domain; pfam02191"
                     /db_xref="CDD:460482"
     CDS             1..490
                     /gene="OLFM4"
                     /coded_by="XM_041466939.1:1..1473"
                     /db_xref="GeneID:121353256"
ORIGIN      
        1 mkhtlvavlf lvqsmsavae ttaatgatah lstmlpyltq prntngkllt spklfanvsg
       61 svndegtcqc svylpdttfp vqkveqleii attlsqkfea elskvreysk rielyqqqil
      121 nltirvhqve tgsvsyteld fqllkveisd lerlvtqlkp slvgsnaive qiyleitnlt
      181 ilvnelesld knnvlairrq itslqnrlke ceenatkttp ppyfppgtcv hrglmnvsqp
      241 yvaklnwrgf sykygswgrd ydpsdpeqev ywvaplntdg ryleyfriyn sfddlllfky
      301 syerrityge gsgaalykny lyyhrygsry mvkhdiktnt evlrkelpga aignrfsyag
      361 vawqdidfav desglwviys tennvgnivi sklnettldv lntwqtrqyk psvsnafmlc
      421 galyatrpln tkkeeifymy dtstgqenrv siimdkkldt iqsidysptd qklyvysdsy
      481 lvrydvtfqa
//
LOCUS       XP_041322876            1968 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 11 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322876
VERSION     XP_041322876.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466942.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1968
                     /product="A-kinase anchor protein 11 isoform X1"
                     /calculated_mol_wt=218130
     Region          <1879..1968
                     /region_name="AKAP_110"
                     /note="A-kinase anchor protein 110 kDa (AKAP 110);
                     cl14906"
                     /db_xref="CDD:449376"
     CDS             1..1968
                     /gene="AKAP11"
                     /coded_by="XM_041466942.1:175..6081"
                     /db_xref="GeneID:121353257"
ORIGIN      
        1 mdiyaraqgn rmksrisvek sfgesilhsm ksllhsrkel cnvsaeecln qeeqdnfiei
       61 tfigfaegmg tshlqelsav svelpdvlks lqlcklkene avflkdvkki vakpyvmkhq
      121 nqlpevfcvm rlspsfprik vdyiftllsk ytagiryave inssqkhqte tthgedddtn
      181 qsvssieddf vtafehlded epskilsagt csftsqnhrd assqtvpaqc leavdsnivv
      241 gsahrksscr ssmlidilgl kelssvknsv ttsisdpwiq rsfykpynps dqgvnflrkt
      301 lfssspaess esdcsspspi ifldeegyqk slkaklqlpk iplvkdgied sdsevseffd
      361 sfdqfdeleq alensckiir dpilrnpaqk rktaheklss asitmnpqkf kfdrptlsan
      421 vkkptprkpe spyssifevp dsprpvktsg eenggffspi rtsafsplgs cgsseclcrv
      481 nlggdgtgqs hrdaacnsys ayadsvscei lgsvlfsess sehlcaends khkkmilkek
      541 krqaadlkmk tskepekqtk skhkslmird siqkfaaelv eksfgsafkd lqkgvssctn
      601 alchlaarlt ssvfqmafye igrrravslk eraingianf lvseaitgal kelrqvkkqi
      661 fnntvarfaa dlaeelvfeg imevcqfsyp stptaqpssf dyenkvvrsy ardlsesviq
      721 eafielsqvd vtfttqaais vsmdnikyvs aesmlestqt stvspnfndr vaqkpiqdsk
      781 keytvqqalf ctsgvvssip vplagralcq qqvssdayrv kvstvpnadd stkifkdsth
      841 pfftsrtree evasfrniyl ssehsqsmes tpslfcnqnd tkltnnrsgm nnnseltsgs
      901 kgintfsgtm vdmivneaye titssrvtka veeysdfltr kvidkkpyvq gtgedtpkst
      961 fadhlakyvi kqsveesktv lcstsenltc nvnsqiyryt nqkeqcvikk qeaekqsnvs
     1021 iiveqqqlpl nnpckfltpt hsvqcilesk nccqeqkgnn fspksplpcs tvtcarhvle
     1081 dctntgscsi tclnkpfkkn dtqklsagal nyrqtdcflh ansfpsemfg segalqmeek
     1141 sslkhgntcl mpdtppptpl vpcqgscern lkklskklkg elakefapat ppstpynpst
     1201 tgssetqhds leneefmlkl mwslseeves sededhsemp vekeehsakt iqyadclash
     1261 iisvatemaa shlggktner eagrqaqlgm qkkrcrytaf vnipeetcns lwnyagdmvg
     1321 kvineakkav ksrhckllrl krvncqvdcf yvnkgdkdgn skewcgpvqd qwlgerdssg
     1381 lplpqgsgma gltskypsce svtdeyadhv irvlkreggn aellvdqyas rlayrsiksg
     1441 lqqaarktkf rcsrktfpgq naqvngklel ikaankdavq qvkssihrce gqmfersvca
     1501 qrrectellh fseslahsit cdvrkklkms gaclpksltd sclykktefd evtgdliktr
     1561 fsrtflpfsp dhklyhstgn inengysegi iqaieqyark vaddtlemsl esavlhvaen
     1621 rkngdkllys eklspfsgtv crccsmkehr yctesmshhl paqgscipvr hflhsglrga
     1681 cqnsrvfqld ipkihvdveq rtvfsdkgat aavekaerel sytsltadsg igqdgvsfae
     1741 sltteimtsa vtnigqavti ssvgregfhs vesvvsqqms lsigddstgs wsnlsfedeh
     1801 pdesssflhl sdssavfsss pgsngnsssw sslglegdmy eenlsfptsd sdvtedkded
     1861 skdavegleq vrktlsimni dlepnlvdpq lraalqwlaa setevsdlhf rdaaarefvf
     1921 lsrrlrerdw kvgdllqavl kycemietas dgeqalsksl vawllenv
//
LOCUS       XP_041322877            1968 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 11 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322877
VERSION     XP_041322877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466943.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1968
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1968
                     /product="A-kinase anchor protein 11 isoform X1"
                     /calculated_mol_wt=218130
     Region          <1879..1968
                     /region_name="AKAP_110"
                     /note="A-kinase anchor protein 110 kDa (AKAP 110);
                     cl14906"
                     /db_xref="CDD:449376"
     CDS             1..1968
                     /gene="AKAP11"
                     /coded_by="XM_041466943.1:320..6226"
                     /db_xref="GeneID:121353257"
ORIGIN      
        1 mdiyaraqgn rmksrisvek sfgesilhsm ksllhsrkel cnvsaeecln qeeqdnfiei
       61 tfigfaegmg tshlqelsav svelpdvlks lqlcklkene avflkdvkki vakpyvmkhq
      121 nqlpevfcvm rlspsfprik vdyiftllsk ytagiryave inssqkhqte tthgedddtn
      181 qsvssieddf vtafehlded epskilsagt csftsqnhrd assqtvpaqc leavdsnivv
      241 gsahrksscr ssmlidilgl kelssvknsv ttsisdpwiq rsfykpynps dqgvnflrkt
      301 lfssspaess esdcsspspi ifldeegyqk slkaklqlpk iplvkdgied sdsevseffd
      361 sfdqfdeleq alensckiir dpilrnpaqk rktaheklss asitmnpqkf kfdrptlsan
      421 vkkptprkpe spyssifevp dsprpvktsg eenggffspi rtsafsplgs cgsseclcrv
      481 nlggdgtgqs hrdaacnsys ayadsvscei lgsvlfsess sehlcaends khkkmilkek
      541 krqaadlkmk tskepekqtk skhkslmird siqkfaaelv eksfgsafkd lqkgvssctn
      601 alchlaarlt ssvfqmafye igrrravslk eraingianf lvseaitgal kelrqvkkqi
      661 fnntvarfaa dlaeelvfeg imevcqfsyp stptaqpssf dyenkvvrsy ardlsesviq
      721 eafielsqvd vtfttqaais vsmdnikyvs aesmlestqt stvspnfndr vaqkpiqdsk
      781 keytvqqalf ctsgvvssip vplagralcq qqvssdayrv kvstvpnadd stkifkdsth
      841 pfftsrtree evasfrniyl ssehsqsmes tpslfcnqnd tkltnnrsgm nnnseltsgs
      901 kgintfsgtm vdmivneaye titssrvtka veeysdfltr kvidkkpyvq gtgedtpkst
      961 fadhlakyvi kqsveesktv lcstsenltc nvnsqiyryt nqkeqcvikk qeaekqsnvs
     1021 iiveqqqlpl nnpckfltpt hsvqcilesk nccqeqkgnn fspksplpcs tvtcarhvle
     1081 dctntgscsi tclnkpfkkn dtqklsagal nyrqtdcflh ansfpsemfg segalqmeek
     1141 sslkhgntcl mpdtppptpl vpcqgscern lkklskklkg elakefapat ppstpynpst
     1201 tgssetqhds leneefmlkl mwslseeves sededhsemp vekeehsakt iqyadclash
     1261 iisvatemaa shlggktner eagrqaqlgm qkkrcrytaf vnipeetcns lwnyagdmvg
     1321 kvineakkav ksrhckllrl krvncqvdcf yvnkgdkdgn skewcgpvqd qwlgerdssg
     1381 lplpqgsgma gltskypsce svtdeyadhv irvlkreggn aellvdqyas rlayrsiksg
     1441 lqqaarktkf rcsrktfpgq naqvngklel ikaankdavq qvkssihrce gqmfersvca
     1501 qrrectellh fseslahsit cdvrkklkms gaclpksltd sclykktefd evtgdliktr
     1561 fsrtflpfsp dhklyhstgn inengysegi iqaieqyark vaddtlemsl esavlhvaen
     1621 rkngdkllys eklspfsgtv crccsmkehr yctesmshhl paqgscipvr hflhsglrga
     1681 cqnsrvfqld ipkihvdveq rtvfsdkgat aavekaerel sytsltadsg igqdgvsfae
     1741 sltteimtsa vtnigqavti ssvgregfhs vesvvsqqms lsigddstgs wsnlsfedeh
     1801 pdesssflhl sdssavfsss pgsngnsssw sslglegdmy eenlsfptsd sdvtedkded
     1861 skdavegleq vrktlsimni dlepnlvdpq lraalqwlaa setevsdlhf rdaaarefvf
     1921 lsrrlrerdw kvgdllqavl kycemietas dgeqalsksl vawllenv
//
LOCUS       XP_041322878            1958 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 11 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322878
VERSION     XP_041322878.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466944.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1958
                     /product="A-kinase anchor protein 11 isoform X2"
                     /calculated_mol_wt=217223
     Region          <1869..1958
                     /region_name="AKAP_110"
                     /note="A-kinase anchor protein 110 kDa (AKAP 110);
                     cl14906"
                     /db_xref="CDD:449376"
     CDS             1..1958
                     /gene="AKAP11"
                     /coded_by="XM_041466944.1:175..6051"
                     /db_xref="GeneID:121353257"
ORIGIN      
        1 mdiyaraqgn rmksrisvek sfgesilhsm ksllhsrkel cnvsaeecln qeeqdnfiei
       61 tfigfaegmg tshlqelsav svelpdvlks lqlcklkene avflkdvkki vakpyvmkhq
      121 nqlpevfcvm rlspsfprik vdyiftllsk ytagiryave inssqkhqte tthgedddtn
      181 qsvssieddf vtafehlded epskilsagt csftsqnhrd assqtvpaqc leavdsnivv
      241 gsahrksscr ssmlidilgl kelssvknsv ttsisdpwiq rsfykpynps dqgvnflrkt
      301 lfssspaess esdcsspspi ifldeegyqk slkaklqlpk iplvkdgied sdsevseffd
      361 sfdqfdeleq alensckiir dpilrnpaqk rktaheklss asitmnpqkf kfdrptlsan
      421 vkkptprkpe spyssifevp dsprpvktsg eenggffspi rtsafsplgs cgsseclcrv
      481 nlggdgtgqs hrdaacnsys ayadsvscei lgsvlfsess sehlcaends khkkmilkek
      541 krqaadlkmk tskepekqtk skhkslmird siqkfaaelv eksfgsafkd lqkgvssctn
      601 alchlaarlt ssvfqmafye igrrravslk eraingianf lvseaitgal kelrqvkkqi
      661 fnntvarfaa dlaeelvfeg imevcqfsyp stptaqpssf dyenkvvrsy ardlsesviq
      721 eafielsqvd vtfttqaais vsmdnikyvs aesmlestqt stvspnfndr vaqkpiqdsk
      781 keytvqqalf ctsgvvssip vplagralcq qqvssdayrv kvstvpnadd stkifkdsth
      841 pfftsrtree evasfrniyl ssehsqsmes tpslfcnqnd tkltnnrsgm nnnseltsgs
      901 kgintfsgtm vdmivneaye titssrvtka veeysdfltr kvidkkpyvq gtgedtpkst
      961 fadhlakyvi kqsveesktv lcstsenltc nvnsqiyryt nqkeqcvikk qeaekqsnvs
     1021 iiveqqqlpl nnpckfltpt hsvqcilesk nccqeqkgnn fspksplpcs tvtcarhvle
     1081 dctntgscsi tclnkpfkkn dtqklsagal nyrqtdcflh ansfpsemfg segalqmeek
     1141 sslkhgntcl mpdtppptpl vpcqgscern lkklskklkg elakefapat ppstpynpst
     1201 tgssetqhds leneefmlkl mwslseeves sededhsemp vekeehsakt iqyadclash
     1261 iisvatemaa shlggktner eagrqaqlgm qkkrcrytaf vnipeetcns lwnyagdmvg
     1321 kvineakkav ksrhckllrl krvncqvdcf yvnkgdkdgn skewcgpvqd qwlgerdssg
     1381 lplpqgsgma gltskypsce svtdeyadhv irvlkreggn aellvdqyas rlayrsiksg
     1441 lqqaarktkf rcsrktfpgq naqvngklel ikaankdavq qvkssihrce gqmfersvca
     1501 qrrectellh fseslahsit cdvrkklkms gaclpksltd sclykktefd evtgdliktr
     1561 fsrtflpfsp dhklyhstgn inengysegi iqaieqyark vaddtlemsl esavlhvaen
     1621 rkngdkllys eklspfsgtv crccsmkehr yctesmshhl paqgscipvr hflhsglrga
     1681 cqnsrvfqld ipkihvdveq rtvfsdkgat aavekaerel sytsltadsg igqdgvsfae
     1741 sltteimtsa vtnigqavti ssvgregfhs vesvvsqqms lsigddstgs wsnlsfedeh
     1801 pdesssflhl sdsngnsssw sslglegdmy eenlsfptsd sdvtedkded skdavegleq
     1861 vrktlsimni dlepnlvdpq lraalqwlaa setevsdlhf rdaaarefvf lsrrlrerdw
     1921 kvgdllqavl kycemietas dgeqalsksl vawllenv
//
LOCUS       XP_041322879            1930 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 11 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322879
VERSION     XP_041322879.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466945.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1930
                     /product="A-kinase anchor protein 11 isoform X3"
                     /calculated_mol_wt=214230
     Region          <1783..1930
                     /region_name="AKAP_110"
                     /note="A-kinase anchor protein 110 kDa (AKAP 110);
                     cl14906"
                     /db_xref="CDD:449376"
     CDS             1..1930
                     /gene="AKAP11"
                     /coded_by="XM_041466945.1:175..5967"
                     /db_xref="GeneID:121353257"
ORIGIN      
        1 mdiyaraqgn rmksrisvek sfgesilhsm ksllhsrkel cnvsaeecln qeeqdnfiei
       61 tfigfaegmg tshlqelsav svelpdvlks lqlcklkene avflkdvkki vakpyvmkhq
      121 nqlpevfcvm rlspsfprik vdyiftllsk ytagiryave inssqkhqte tthgedddtn
      181 qsvssieddf vtafehlded epskilsagt csftsqnhrd assqtvpaqc leavdsnivv
      241 gsahrksscr ssmlidilgl kelssvknsv ttsisdpwiq rsfykpynps dqgvnflrkt
      301 lfssspaess esdcsspspi ifldeegyqk slkaklqlpk iplvkdgied sdsevseffd
      361 sfdqfdeleq alensckiir dpilrnpaqk rktaheklss asitmnpqkf kfdrptlsan
      421 vkkptprkpe spyssifevp dsprpvktsg eenggffspi rtsafsplgs cgsseclcrv
      481 nlggdgtgqs hrdaacnsys ayadsvscei lgsvlfsess sehlcaends khkkmilkek
      541 krqaadlkmk tskepekqtk skhkslmird siqkfaaelv eksfgsafkd lqkgvssctn
      601 alchlaarlt ssvfqmafye igrrravslk eraingianf lvseaitgal kelrqvkkqi
      661 fnntvarfaa dlaeelvfeg imevcqfsyp stptaqpssf dyenkvvrsy ardlsesviq
      721 eafielsqvd vtfttqaais vsmdnikyvs aesmlestqt stvspnfndr vaqkpiqdsk
      781 keytvqqalf ctsgvvssip vplagralcq qqvssdayrv kvstvpnadd stkifkdsth
      841 pfftsrtree evasfrniyl ssehsqsmes tpslfcnqnd tkltnnrsgm nnnseltsgs
      901 kgintfsgtm vdmivneaye titssrvtka veeysdfltr kvidkkpyvq gtgedtpkst
      961 fadhlakyvi kqsveesktv lcstsenltc nvnsqiyryt nqkeqcvikk qeaekqsnvs
     1021 iiveqqqlpl nnpckfltpt hsvqcilesk nccqeqkgnn fspksplpcs tvtcarhvle
     1081 dctntgscsi tclnkpfkkn dtqklsagal nyrqtdcflh ansfpsemfg segalqmeek
     1141 sslkhgntcl mpdtppptpl vpcqgscern lkklskklkg elakefapat ppstpynpst
     1201 tgssetqhds leneefmlkl mwslseeves sededhsemp vekeehsakt iqyadclash
     1261 iisvatemaa shlggktner eagrqaqlgm qkkrcrytaf vnipeetcns lwnyagdmvg
     1321 kvineakkav ksrhckllrl krvncqvdcf yvnkgdkdgn skewcgpvqd qwlgerdssg
     1381 lplpqgsgma gltskypsce svtdeyadhv irvlkreggn aellvdqyas rlayrsiksg
     1441 lqqaarktkf rcsrktfpgq naqvngklel ikaankdavq qvkssihrce gqmfersvca
     1501 qrrectellh fseslahsit cdvrkklkms gaclpksltd sclykktefd evtgdliktr
     1561 fsrtflpfsp dhklyhstgn inengysegi iqaieqyark vaddtlemsl esavlhvaen
     1621 rkngdkllys eklspfsgtv crccsmkehr yctesmshhl paqgscipvr hflhsglrga
     1681 cqnsrvfqld ipkihvdveq rtvfsdkgat aavekaerel sytsltadsg igqdgvsfae
     1741 sltteimtsa vtnigqavti ssvgregfhs vesvvsqqms lsigddstgs wsnlsfedeh
     1801 pdesssflhl sdsdvtedkd edskdavegl eqvrktlsim nidlepnlvd pqlraalqwl
     1861 aasetevsdl hfrdaaaref vflsrrlrer dwkvgdllqa vlkycemiet asdgeqalsk
     1921 slvawllenv
//
LOCUS       XP_041322880             852 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322880
VERSION     XP_041322880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466946.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..852
                     /product="thrombospondin type-1 domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=95440
     Region          344..393
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     CDS             1..852
                     /gene="THSD1"
                     /coded_by="XM_041466946.1:464..3022"
                     /db_xref="GeneID:121353258"
ORIGIN      
        1 mkymlkdfsn lllvvlcdyv lgeveyllle hpdhvafsnd tvsveyqyys ggnvtaehvs
       61 illldastse iiarkqlpan qsqgtvvfec fhfksagdfv fkmvspsdns saaqwsrssm
      121 stlhvewpvf hidlnrssev lgsslqvglf tneqlcamnk tvisldvift stlyefrrvc
      181 sdetlgirts kiiplsrsqw vefdcppvgq eiyitvllks lethsiiasi gpvdllhkfg
      241 yrlvvaaedt cktlvqvsvi sppctsisgk ivvykealkh ssqrttwlye silhpgdnrt
      301 efnctlfdvg knkycfdlln fsnrsyfpar vkecmliqrn metwsrwqpw spcsvtcgdg
      361 irerfreclt sspakpgcag spretslcsl eecvsvqppt ppsvqpgedq kannivtitg
      421 islclfiifa tvlitlwrkl craqkcstav rrnsvhspgf rknsdeenic qgnkqrdsfa
      481 eggdapvnip ltyrrslqfa qeddvsgses fqpnaqkiip pifsyrlaqq qlkemkkkgl
      541 tettkvyhvs qnpltdtvlg atsmlplsge nqeeaaankf rikspfldqp anqpkflgeg
      601 shprldfpfs qanpavsptq tlvrrghfkh qdnrvdlper gchrnsqfrr tasfhetkka
      661 rpfrersmst ltprqtplys srtrtwdqgl edrtrpksrn anaacekldq phgtvlgcep
      721 qghgakphhr agppvrkldl itdrqpagqe kaaekpepsr skrgpspnpk gvwrketgpn
      781 gkdnsqrgls vspaqyrrdk cqsfpldpef afydnstfgl teaeqqmidl pgyfgsneed
      841 etstlsiekl vi
//
LOCUS       XP_041322881             852 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322881
VERSION     XP_041322881.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466947.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..852
                     /product="thrombospondin type-1 domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=95440
     Region          344..393
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     CDS             1..852
                     /gene="THSD1"
                     /coded_by="XM_041466947.1:268..2826"
                     /db_xref="GeneID:121353258"
ORIGIN      
        1 mkymlkdfsn lllvvlcdyv lgeveyllle hpdhvafsnd tvsveyqyys ggnvtaehvs
       61 illldastse iiarkqlpan qsqgtvvfec fhfksagdfv fkmvspsdns saaqwsrssm
      121 stlhvewpvf hidlnrssev lgsslqvglf tneqlcamnk tvisldvift stlyefrrvc
      181 sdetlgirts kiiplsrsqw vefdcppvgq eiyitvllks lethsiiasi gpvdllhkfg
      241 yrlvvaaedt cktlvqvsvi sppctsisgk ivvykealkh ssqrttwlye silhpgdnrt
      301 efnctlfdvg knkycfdlln fsnrsyfpar vkecmliqrn metwsrwqpw spcsvtcgdg
      361 irerfreclt sspakpgcag spretslcsl eecvsvqppt ppsvqpgedq kannivtitg
      421 islclfiifa tvlitlwrkl craqkcstav rrnsvhspgf rknsdeenic qgnkqrdsfa
      481 eggdapvnip ltyrrslqfa qeddvsgses fqpnaqkiip pifsyrlaqq qlkemkkkgl
      541 tettkvyhvs qnpltdtvlg atsmlplsge nqeeaaankf rikspfldqp anqpkflgeg
      601 shprldfpfs qanpavsptq tlvrrghfkh qdnrvdlper gchrnsqfrr tasfhetkka
      661 rpfrersmst ltprqtplys srtrtwdqgl edrtrpksrn anaacekldq phgtvlgcep
      721 qghgakphhr agppvrkldl itdrqpagqe kaaekpepsr skrgpspnpk gvwrketgpn
      781 gkdnsqrgls vspaqyrrdk cqsfpldpef afydnstfgl teaeqqmidl pgyfgsneed
      841 etstlsiekl vi
//
LOCUS       XP_041322882             852 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322882
VERSION     XP_041322882.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466948.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..852
                     /product="thrombospondin type-1 domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=95440
     Region          344..393
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     CDS             1..852
                     /gene="THSD1"
                     /coded_by="XM_041466948.1:427..2985"
                     /db_xref="GeneID:121353258"
ORIGIN      
        1 mkymlkdfsn lllvvlcdyv lgeveyllle hpdhvafsnd tvsveyqyys ggnvtaehvs
       61 illldastse iiarkqlpan qsqgtvvfec fhfksagdfv fkmvspsdns saaqwsrssm
      121 stlhvewpvf hidlnrssev lgsslqvglf tneqlcamnk tvisldvift stlyefrrvc
      181 sdetlgirts kiiplsrsqw vefdcppvgq eiyitvllks lethsiiasi gpvdllhkfg
      241 yrlvvaaedt cktlvqvsvi sppctsisgk ivvykealkh ssqrttwlye silhpgdnrt
      301 efnctlfdvg knkycfdlln fsnrsyfpar vkecmliqrn metwsrwqpw spcsvtcgdg
      361 irerfreclt sspakpgcag spretslcsl eecvsvqppt ppsvqpgedq kannivtitg
      421 islclfiifa tvlitlwrkl craqkcstav rrnsvhspgf rknsdeenic qgnkqrdsfa
      481 eggdapvnip ltyrrslqfa qeddvsgses fqpnaqkiip pifsyrlaqq qlkemkkkgl
      541 tettkvyhvs qnpltdtvlg atsmlplsge nqeeaaankf rikspfldqp anqpkflgeg
      601 shprldfpfs qanpavsptq tlvrrghfkh qdnrvdlper gchrnsqfrr tasfhetkka
      661 rpfrersmst ltprqtplys srtrtwdqgl edrtrpksrn anaacekldq phgtvlgcep
      721 qghgakphhr agppvrkldl itdrqpagqe kaaekpepsr skrgpspnpk gvwrketgpn
      781 gkdnsqrgls vspaqyrrdk cqsfpldpef afydnstfgl teaeqqmidl pgyfgsneed
      841 etstlsiekl vi
//
LOCUS       XP_041322883             801 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322883
VERSION     XP_041322883.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466949.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..801
                     /product="thrombospondin type-1 domain-containing protein
                     1 isoform X2"
                     /calculated_mol_wt=89689
     Region          344..393
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     CDS             1..801
                     /gene="THSD1"
                     /coded_by="XM_041466949.1:464..2869"
                     /db_xref="GeneID:121353258"
ORIGIN      
        1 mkymlkdfsn lllvvlcdyv lgeveyllle hpdhvafsnd tvsveyqyys ggnvtaehvs
       61 illldastse iiarkqlpan qsqgtvvfec fhfksagdfv fkmvspsdns saaqwsrssm
      121 stlhvewpvf hidlnrssev lgsslqvglf tneqlcamnk tvisldvift stlyefrrvc
      181 sdetlgirts kiiplsrsqw vefdcppvgq eiyitvllks lethsiiasi gpvdllhkfg
      241 yrlvvaaedt cktlvqvsvi sppctsisgk ivvykealkh ssqrttwlye silhpgdnrt
      301 efnctlfdvg knkycfdlln fsnrsyfpar vkecmliqrn metwsrwqpw spcsvtcgdg
      361 irerfreclt sspakpgcag spretslcsl eecvsvqppt ppsvqpgedq kannivtitg
      421 islclfiifa tvlitlwrkl craqkcstav rrnsvhspgf rknsdeenic qgnkqrdsfa
      481 eggdapvnip ltyrrslqfa qeddvsgses fqpnaqkiip pifsyrlaqq qlkemkkkgl
      541 tettkvyhvs qnpltdtvlg atsmlplsge nqeeaaankf rikspfldqp anqpkflgeg
      601 shprldfpfs qanpavsptq tlvrrghfkh qdnrvdlper gchrnsqfrr tasfhetkka
      661 rpfrersmst ltprqtplys srtrtwdqgl edrtrpksrn anaacekldq phgtvlgcep
      721 qghgakphhr agppvrkldl itdrqpagqe kaaekpepsr skrgpspnpk eaeqqmidlp
      781 gyfgsneede tstlsieklv i
//
LOCUS       XP_041322884             337 aa            linear   VRT 06-MAY-2021
DEFINITION  fibrinogen-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322884
VERSION     XP_041322884.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466950.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="fibrinogen-like protein 1"
                     /calculated_mol_wt=38840
     Region          95..319
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            215
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(254,256,258)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(263,266..267,276..277)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..337
                     /gene="LOC121353259"
                     /coded_by="XM_041466950.1:185..1198"
                     /db_xref="GeneID:121353259"
ORIGIN      
        1 msvmmhllll llllvsfgsp aprfsdkdic lldnsklrqr lkhlqdllyl yelqlkdile
       61 ntyhrtksel fsgnrsvqhe tllpttsgnl ivydqdcsav ygrksttsgy yrirpraeqe
      121 pflafcdmsd gggwtviqrr sngkenfnrk wddyklgfgk fqgkndeywl gndhihdlla
      181 rgenslkidl mdwhgerrya iyenfqlane qenyrlwfgt ysgnagdals ggsnfedqws
      241 ashrgmqftt fdkdhdqfla gncasenkgg wwfnrchavn lngryykrgr ysgphddglv
      301 wstwhgmwys lkysamkira pffidgesgd gdnsqgs
//
LOCUS       XP_041322886             337 aa            linear   VRT 06-MAY-2021
DEFINITION  fibrinogen-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322886
VERSION     XP_041322886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="fibrinogen-like protein 1"
                     /calculated_mol_wt=38840
     Region          95..319
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            215
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(254,256,258)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(263,266..267,276..277)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..337
                     /gene="LOC121353259"
                     /coded_by="XM_041466952.1:259..1272"
                     /db_xref="GeneID:121353259"
ORIGIN      
        1 msvmmhllll llllvsfgsp aprfsdkdic lldnsklrqr lkhlqdllyl yelqlkdile
       61 ntyhrtksel fsgnrsvqhe tllpttsgnl ivydqdcsav ygrksttsgy yrirpraeqe
      121 pflafcdmsd gggwtviqrr sngkenfnrk wddyklgfgk fqgkndeywl gndhihdlla
      181 rgenslkidl mdwhgerrya iyenfqlane qenyrlwfgt ysgnagdals ggsnfedqws
      241 ashrgmqftt fdkdhdqfla gncasenkgg wwfnrchavn lngryykrgr ysgphddglv
      301 wstwhgmwys lkysamkira pffidgesgd gdnsqgs
//
LOCUS       XP_041322887             337 aa            linear   VRT 06-MAY-2021
DEFINITION  fibrinogen-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322887
VERSION     XP_041322887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="fibrinogen-like protein 1"
                     /calculated_mol_wt=38840
     Region          95..319
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            215
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(254,256,258)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(263,266..267,276..277)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..337
                     /gene="LOC121353259"
                     /coded_by="XM_041466953.1:252..1265"
                     /db_xref="GeneID:121353259"
ORIGIN      
        1 msvmmhllll llllvsfgsp aprfsdkdic lldnsklrqr lkhlqdllyl yelqlkdile
       61 ntyhrtksel fsgnrsvqhe tllpttsgnl ivydqdcsav ygrksttsgy yrirpraeqe
      121 pflafcdmsd gggwtviqrr sngkenfnrk wddyklgfgk fqgkndeywl gndhihdlla
      181 rgenslkidl mdwhgerrya iyenfqlane qenyrlwfgt ysgnagdals ggsnfedqws
      241 ashrgmqftt fdkdhdqfla gncasenkgg wwfnrchavn lngryykrgr ysgphddglv
      301 wstwhgmwys lkysamkira pffidgesgd gdnsqgs
//
LOCUS       XP_041322888             524 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322888
VERSION     XP_041322888.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466954.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..524
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase TPTE2-like isoform X1"
                     /calculated_mol_wt=59935
     Region          69..>188
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          201..377
                     /region_name="PTP_VSP_TPTE"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of voltage-sensitive phosphatase/transmembrane phosphatase
                     with tensin homology; cd14510"
                     /db_xref="CDD:350360"
     Region          386..523
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     CDS             1..524
                     /gene="LOC121353260"
                     /coded_by="XM_041466954.1:177..1751"
                     /db_xref="GeneID:121353260"
ORIGIN      
        1 mlhgevsrtt ttgkmtavry eqgtqsress ssptaeeatv kidngrdegd gpdtcsnatr
       61 rkiapfvmsf gfrvfgvvli fvdiivvild lamserkkgt eipegvslai alfflidvll
      121 rvfvegfrny fqsklnilda civvgtllin ltycfldvga aqeiprmvif lrilrivili
      181 rvfrlasqkq qlervtrrmv senkrryvkd gfdldltyit driiamsfps sgkqsfyrnp
      241 ikevarfldt khpghykvyn lcseqgydpk yfhyrverif iddhnvpalq dmlkftasvr
      301 ewmsqdeknv iaihckggkg rtgtmvctwl idsdqfesak esldyfgerr tdrststkfq
      361 gvetpsqsry vgyyeilknk ynlelpperq lkiknlkiht ihgvgkgngt dmkvqiitrk
      421 rivlqcvcgn qkncrlffds esdtvvigle dcpvlsgdvk vrfecnsalp kgydgcpfff
      481 wfntsfienn rlylprneld nphksktwkv ysetfavevn fida
//
LOCUS       XP_041322889             510 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322889
VERSION     XP_041322889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase TPTE2-like isoform X2"
                     /calculated_mol_wt=58435
     Region          55..>174
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          187..363
                     /region_name="PTP_VSP_TPTE"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of voltage-sensitive phosphatase/transmembrane phosphatase
                     with tensin homology; cd14510"
                     /db_xref="CDD:350360"
     Region          372..509
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     CDS             1..510
                     /gene="LOC121353260"
                     /coded_by="XM_041466955.1:150..1682"
                     /db_xref="GeneID:121353260"
ORIGIN      
        1 mtavryeqgt qsresssspt aeeatvkidn grdegdgpdt csnatrrkia pfvmsfgfrv
       61 fgvvlifvdi ivvildlams erkkgteipe gvslaialff lidvllrvfv egfrnyfqsk
      121 lnildacivv gtllinltyc fldvgaaqei prmviflril rivilirvfr lasqkqqler
      181 vtrrmvsenk rryvkdgfdl dltyitdrii amsfpssgkq sfyrnpikev arfldtkhpg
      241 hykvynlcse qgydpkyfhy rverifiddh nvpalqdmlk ftasvrewms qdeknviaih
      301 ckggkgrtgt mvctwlidsd qfesakesld yfgerrtdrs tstkfqgvet psqsryvgyy
      361 eilknkynle lpperqlkik nlkihtihgv gkgngtdmkv qiitrkrivl qcvcgnqknc
      421 rlffdsesdt vvigledcpv lsgdvkvrfe cnsalpkgyd gcpfffwfnt sfiennrlyl
      481 prneldnphk sktwkvyset favevnfida
//
LOCUS       XP_041322890             510 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322890
VERSION     XP_041322890.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466956.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase TPTE2-like isoform X2"
                     /calculated_mol_wt=58435
     Region          55..>174
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          187..363
                     /region_name="PTP_VSP_TPTE"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of voltage-sensitive phosphatase/transmembrane phosphatase
                     with tensin homology; cd14510"
                     /db_xref="CDD:350360"
     Region          372..509
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     CDS             1..510
                     /gene="LOC121353260"
                     /coded_by="XM_041466956.1:161..1693"
                     /db_xref="GeneID:121353260"
ORIGIN      
        1 mtavryeqgt qsresssspt aeeatvkidn grdegdgpdt csnatrrkia pfvmsfgfrv
       61 fgvvlifvdi ivvildlams erkkgteipe gvslaialff lidvllrvfv egfrnyfqsk
      121 lnildacivv gtllinltyc fldvgaaqei prmviflril rivilirvfr lasqkqqler
      181 vtrrmvsenk rryvkdgfdl dltyitdrii amsfpssgkq sfyrnpikev arfldtkhpg
      241 hykvynlcse qgydpkyfhy rverifiddh nvpalqdmlk ftasvrewms qdeknviaih
      301 ckggkgrtgt mvctwlidsd qfesakesld yfgerrtdrs tstkfqgvet psqsryvgyy
      361 eilknkynle lpperqlkik nlkihtihgv gkgngtdmkv qiitrkrivl qcvcgnqknc
      421 rlffdsesdt vvigledcpv lsgdvkvrfe cnsalpkgyd gcpfffwfnt sfiennrlyl
      481 prneldnphk sktwkvyset favevnfida
//
LOCUS       XP_041322891             510 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322891
VERSION     XP_041322891.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466957.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..510
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     3-phosphatase TPTE2-like isoform X2"
                     /calculated_mol_wt=58435
     Region          55..>174
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          187..363
                     /region_name="PTP_VSP_TPTE"
                     /note="protein tyrosine phosphatase-like catalytic domain
                     of voltage-sensitive phosphatase/transmembrane phosphatase
                     with tensin homology; cd14510"
                     /db_xref="CDD:350360"
     Region          372..509
                     /region_name="PTEN_C2"
                     /note="C2 domain of PTEN tumour-suppressor protein;
                     pfam10409"
                     /db_xref="CDD:463081"
     CDS             1..510
                     /gene="LOC121353260"
                     /coded_by="XM_041466957.1:160..1692"
                     /db_xref="GeneID:121353260"
ORIGIN      
        1 mtavryeqgt qsresssspt aeeatvkidn grdegdgpdt csnatrrkia pfvmsfgfrv
       61 fgvvlifvdi ivvildlams erkkgteipe gvslaialff lidvllrvfv egfrnyfqsk
      121 lnildacivv gtllinltyc fldvgaaqei prmviflril rivilirvfr lasqkqqler
      181 vtrrmvsenk rryvkdgfdl dltyitdrii amsfpssgkq sfyrnpikev arfldtkhpg
      241 hykvynlcse qgydpkyfhy rverifiddh nvpalqdmlk ftasvrewms qdeknviaih
      301 ckggkgrtgt mvctwlidsd qfesakesld yfgerrtdrs tstkfqgvet psqsryvgyy
      361 eilknkynle lpperqlkik nlkihtihgv gkgngtdmkv qiitrkrivl qcvcgnqknc
      421 rlffdsesdt vvigledcpv lsgdvkvrfe cnsalpkgyd gcpfffwfnt sfiennrlyl
      481 prneldnphk sktwkvyset favevnfida
//
LOCUS       XP_041322892             889 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322892
VERSION     XP_041322892.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466958.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..889
                     /product="integrator complex subunit 6 isoform X1"
                     /calculated_mol_wt=100282
     Region          4..103
                     /region_name="VWA_2"
                     /note="von Willebrand factor type A domain; pfam13519"
                     /db_xref="CDD:463909"
     Region          809..870
                     /region_name="INT_SG_DDX_CT_C"
                     /note="INTS6/SAGE1/DDX26B/CT45 C-terminus; pfam15300"
                     /db_xref="CDD:464626"
     CDS             1..889
                     /gene="INTS6"
                     /coded_by="XM_041466958.1:188..2857"
                     /db_xref="GeneID:121353261"
ORIGIN      
        1 mpillflidt sasmnqrthl gttyldiakg avetfmklra rdpasrgdry mlvtfeeppy
       61 aikagwkenh atfmnelknl qaeglttlgq slrtafdlln lnrlvtgidn ygqgrnpffl
      121 epaiiitvtd gskltttsgi qeelhlplns plpgseltke pfrwdqrlfa lvlrlpgita
      181 peseqmtgvp vddsaitpmc evtggrsycv csprmlnqcl eslvqkvqsg vvinfekagp
      241 dpspiddgqv eisrpfgpqp whschkliyv rpnpktgvpi ghwpvpesfw pdqnsptlpp
      301 rtshpvvkfs ctdcepmvid klpfdkyele pspltqfile rkspqtcwqv yvsnsakyse
      361 lghpfgylka stalncvnlf vmpynypvll pllddlfkvh kakptlkwrq sfesylktmp
      421 pyylgplkka vrmmgapnli adnveyglsy svisylkkls qqakiesdrv igsvgkkvaq
      481 etgikvrsrs hnlsmahrnd fqhllqgitg eiphrpldln mkeyagfqia llnkdlkpqt
      541 frnaydiprr nlldqltrmr snllkstckl lkgqdedqvh svpiaqmgny qeylkqipsp
      601 lreldpdqpr rlhtfgnpfk ldkkgmmide adefvsgpqn khkrpgepnm qgipkrrrcm
      661 spllrgrpqt lpvvnnhigg kgpptpiaqa qpdlikpiai hktsetnnev gvddvienhs
      721 tgtlsldvfp navdsefsls sspfnsldrp aahtednigh ehlgnnlnvd gflenheess
      781 skeqspeenl kmsspskgkk pvhcrssrei nielraqimk eirkpgrkye riffllkhvq
      841 gslqtrlifl qnvikeasrf kkrmlieqle sfleeihrrs nqvnhikss
//
LOCUS       XP_041322893             889 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322893
VERSION     XP_041322893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466959.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..889
                     /product="integrator complex subunit 6 isoform X1"
                     /calculated_mol_wt=100282
     Region          4..103
                     /region_name="VWA_2"
                     /note="von Willebrand factor type A domain; pfam13519"
                     /db_xref="CDD:463909"
     Region          809..870
                     /region_name="INT_SG_DDX_CT_C"
                     /note="INTS6/SAGE1/DDX26B/CT45 C-terminus; pfam15300"
                     /db_xref="CDD:464626"
     CDS             1..889
                     /gene="INTS6"
                     /coded_by="XM_041466959.1:93..2762"
                     /db_xref="GeneID:121353261"
ORIGIN      
        1 mpillflidt sasmnqrthl gttyldiakg avetfmklra rdpasrgdry mlvtfeeppy
       61 aikagwkenh atfmnelknl qaeglttlgq slrtafdlln lnrlvtgidn ygqgrnpffl
      121 epaiiitvtd gskltttsgi qeelhlplns plpgseltke pfrwdqrlfa lvlrlpgita
      181 peseqmtgvp vddsaitpmc evtggrsycv csprmlnqcl eslvqkvqsg vvinfekagp
      241 dpspiddgqv eisrpfgpqp whschkliyv rpnpktgvpi ghwpvpesfw pdqnsptlpp
      301 rtshpvvkfs ctdcepmvid klpfdkyele pspltqfile rkspqtcwqv yvsnsakyse
      361 lghpfgylka stalncvnlf vmpynypvll pllddlfkvh kakptlkwrq sfesylktmp
      421 pyylgplkka vrmmgapnli adnveyglsy svisylkkls qqakiesdrv igsvgkkvaq
      481 etgikvrsrs hnlsmahrnd fqhllqgitg eiphrpldln mkeyagfqia llnkdlkpqt
      541 frnaydiprr nlldqltrmr snllkstckl lkgqdedqvh svpiaqmgny qeylkqipsp
      601 lreldpdqpr rlhtfgnpfk ldkkgmmide adefvsgpqn khkrpgepnm qgipkrrrcm
      661 spllrgrpqt lpvvnnhigg kgpptpiaqa qpdlikpiai hktsetnnev gvddvienhs
      721 tgtlsldvfp navdsefsls sspfnsldrp aahtednigh ehlgnnlnvd gflenheess
      781 skeqspeenl kmsspskgkk pvhcrssrei nielraqimk eirkpgrkye riffllkhvq
      841 gslqtrlifl qnvikeasrf kkrmlieqle sfleeihrrs nqvnhikss
//
LOCUS       XP_041322895             845 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322895
VERSION     XP_041322895.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466961.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..845
                     /product="integrator complex subunit 6 isoform X2"
                     /calculated_mol_wt=95357
     Region          4..103
                     /region_name="VWA_2"
                     /note="von Willebrand factor type A domain; pfam13519"
                     /db_xref="CDD:463909"
     Region          765..826
                     /region_name="INT_SG_DDX_CT_C"
                     /note="INTS6/SAGE1/DDX26B/CT45 C-terminus; pfam15300"
                     /db_xref="CDD:464626"
     CDS             1..845
                     /gene="INTS6"
                     /coded_by="XM_041466961.1:439..2976"
                     /db_xref="GeneID:121353261"
ORIGIN      
        1 mpillflidt sasmnqrthl gttyldiakg avetfmklra rdpasrgdry mlvtfeeppy
       61 aikagwkenh atfmnelknl qaeglttlgq slrtafdlln lnrlvtgidn ygqgrnpffl
      121 epaiiitvtd gskltttsgi qeelhlplns plpgseltke pfrwdqrlfa lvlrlpgita
      181 peseqmtgvp vddsaitpmc evtggrsycv csprmlnqcl eslvqkvqsg vvinfekagp
      241 dpspiddgqv eisrpfgpqp whschkliyv rpnpktgvpi ghwpvpesfw pdqnsptlpp
      301 rtshpvvkfs ctdcepmvid klpfdkyele pspltqfile rkspqtcwqv yvsnsakyse
      361 lghpfgylka stalncvnlf vmpynypvll pllddlfkvh kakptlkwrq sfesylktmp
      421 pyylgplkka vrmmgapnli adnveyglsy svisylkkls qqgitgeiph rpldlnmkey
      481 agfqiallnk dlkpqtfrna ydiprrnlld qltrmrsnll kstckllkgq dedqvhsvpi
      541 aqmgnyqeyl kqipsplrel dpdqprrlht fgnpfkldkk gmmideadef vsgpqnkhkr
      601 pgepnmqgip krrrcmspll rgrpqtlpvv nnhiggkgpp tpiaqaqpdl ikpiaihkts
      661 etnnevgvdd vienhstgtl sldvfpnavd sefslssspf nsldrpaaht ednighehlg
      721 nnlnvdgfle nheessskeq speenlkmss pskgkkpvhc rssreiniel raqimkeirk
      781 pgrkyeriff llkhvqgslq trliflqnvi keasrfkkrm lieqlesfle eihrrsnqvn
      841 hikss
//
LOCUS       XP_041322896             817 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 6 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322896
VERSION     XP_041322896.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466962.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..817
                     /product="integrator complex subunit 6 isoform X3"
                     /calculated_mol_wt=92235
     Region          4..103
                     /region_name="VWA_2"
                     /note="von Willebrand factor type A domain; pfam13519"
                     /db_xref="CDD:463909"
     Region          737..798
                     /region_name="INT_SG_DDX_CT_C"
                     /note="INTS6/SAGE1/DDX26B/CT45 C-terminus; pfam15300"
                     /db_xref="CDD:464626"
     CDS             1..817
                     /gene="INTS6"
                     /coded_by="XM_041466962.1:439..2892"
                     /db_xref="GeneID:121353261"
ORIGIN      
        1 mpillflidt sasmnqrthl gttyldiakg avetfmklra rdpasrgdry mlvtfeeppy
       61 aikagwkenh atfmnelknl qaeglttlgq slrtafdlln lnrlvtgidn ygqgrnpffl
      121 epaiiitvtd gskltttsgi qeelhlplns plpgseltke pfrwdqrlfa lvlrlpgita
      181 peseqmtgvp vddsaitpmc evtggrsycv csprmlnqcl eslvqkvqsg vvinfekagp
      241 dpspiddgqv eisrpfgpqp whschkliyv rpnpktgvpi ghwpvpesfw pdqnsptlpp
      301 rtshpvvkfs ctdcepmvid klpfdkyele pspltqfile rkspqtcwqv yvsnsakyse
      361 lghpfgylka stalncvnlf vmpynypvll pllddlfkvh kakptlkwrq sfesylktmp
      421 pyylgplkka vrmmgapnli adnveyglsy svisylkkls qqdlkpqtfr naydiprrnl
      481 ldqltrmrsn llkstckllk gqdedqvhsv piaqmgnyqe ylkqipsplr eldpdqprrl
      541 htfgnpfkld kkgmmidead efvsgpqnkh krpgepnmqg ipkrrrcmsp llrgrpqtlp
      601 vvnnhiggkg pptpiaqaqp dlikpiaihk tsetnnevgv ddvienhstg tlsldvfpna
      661 vdsefslsss pfnsldrpaa htednigheh lgnnlnvdgf lenheesssk eqspeenlkm
      721 sspskgkkpv hcrssreini elraqimkei rkpgrkyeri ffllkhvqgs lqtrliflqn
      781 vikeasrfkk rmlieqlesf leeihrrsnq vnhikss
//
LOCUS       XP_041322897             627 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322897
VERSION     XP_041322897.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466963.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="ETS-related transcription factor Elf-1 isoform
                     X1"
                     /calculated_mol_wt=68565
     Region          2..109
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          204..286
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     Region          <361..531
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     CDS             1..627
                     /gene="ELF1"
                     /coded_by="XM_041466963.1:373..2256"
                     /db_xref="GeneID:121353262"
ORIGIN      
        1 maavvqqnel vfefasnvme deqqlgdpsi fpavivehvp saellhnysg ltcvdepsdm
       61 itensldvae eqiiedddit ltveaschng detmetieaa eallnmdspd pmldekrmtt
      121 mfgapeeeem vppithvsvt ldgipevvev hqapdpyaes petpefeqpk kkkgkkpkps
      181 rsesptttpn isvkkknkdg kgntiylwef llallqdkat cpkyikwtqr ekgifklvds
      241 kavsrlwgkh knkpdmnyet mgralryyyq rgilakvegq rlvyqfkdmp kdliyidded
      301 aspstessds tllspavanr nqssrtrasa nagtkggsas vvktgnskpa klkeqvevvq
      361 qqtpgltsea lrtmqspqpv qptqlfrtvh vmqplqplte gqaavtsnvp deslnssvqn
      421 isrtlqtptq vpvvvspgnq qlhavtlqtv plttviastd pasvttaqkf ilqaiptsqp
      481 mtvlkeniml qsqkpvspps sivlspaqvq qvltssvqti cngtvnmass psfsattpvv
      541 tfspsssqvv sqpsgtvits vikapdtkqv glqeeekees dkvedaeqse qrfqqqpfvm
      601 vvsssnnfps dvqvkqenep lepnlyc
//
LOCUS       XP_041322898             627 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322898
VERSION     XP_041322898.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466964.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="ETS-related transcription factor Elf-1 isoform
                     X1"
                     /calculated_mol_wt=68565
     Region          2..109
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          204..286
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     Region          <361..531
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     CDS             1..627
                     /gene="ELF1"
                     /coded_by="XM_041466964.1:369..2252"
                     /db_xref="GeneID:121353262"
ORIGIN      
        1 maavvqqnel vfefasnvme deqqlgdpsi fpavivehvp saellhnysg ltcvdepsdm
       61 itensldvae eqiiedddit ltveaschng detmetieaa eallnmdspd pmldekrmtt
      121 mfgapeeeem vppithvsvt ldgipevvev hqapdpyaes petpefeqpk kkkgkkpkps
      181 rsesptttpn isvkkknkdg kgntiylwef llallqdkat cpkyikwtqr ekgifklvds
      241 kavsrlwgkh knkpdmnyet mgralryyyq rgilakvegq rlvyqfkdmp kdliyidded
      301 aspstessds tllspavanr nqssrtrasa nagtkggsas vvktgnskpa klkeqvevvq
      361 qqtpgltsea lrtmqspqpv qptqlfrtvh vmqplqplte gqaavtsnvp deslnssvqn
      421 isrtlqtptq vpvvvspgnq qlhavtlqtv plttviastd pasvttaqkf ilqaiptsqp
      481 mtvlkeniml qsqkpvspps sivlspaqvq qvltssvqti cngtvnmass psfsattpvv
      541 tfspsssqvv sqpsgtvits vikapdtkqv glqeeekees dkvedaeqse qrfqqqpfvm
      601 vvsssnnfps dvqvkqenep lepnlyc
//
LOCUS       XP_041322899             627 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322899
VERSION     XP_041322899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="ETS-related transcription factor Elf-1 isoform
                     X1"
                     /calculated_mol_wt=68565
     Region          2..109
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          204..286
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     Region          <361..531
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     CDS             1..627
                     /gene="ELF1"
                     /coded_by="XM_041466965.1:342..2225"
                     /db_xref="GeneID:121353262"
ORIGIN      
        1 maavvqqnel vfefasnvme deqqlgdpsi fpavivehvp saellhnysg ltcvdepsdm
       61 itensldvae eqiiedddit ltveaschng detmetieaa eallnmdspd pmldekrmtt
      121 mfgapeeeem vppithvsvt ldgipevvev hqapdpyaes petpefeqpk kkkgkkpkps
      181 rsesptttpn isvkkknkdg kgntiylwef llallqdkat cpkyikwtqr ekgifklvds
      241 kavsrlwgkh knkpdmnyet mgralryyyq rgilakvegq rlvyqfkdmp kdliyidded
      301 aspstessds tllspavanr nqssrtrasa nagtkggsas vvktgnskpa klkeqvevvq
      361 qqtpgltsea lrtmqspqpv qptqlfrtvh vmqplqplte gqaavtsnvp deslnssvqn
      421 isrtlqtptq vpvvvspgnq qlhavtlqtv plttviastd pasvttaqkf ilqaiptsqp
      481 mtvlkeniml qsqkpvspps sivlspaqvq qvltssvqti cngtvnmass psfsattpvv
      541 tfspsssqvv sqpsgtvits vikapdtkqv glqeeekees dkvedaeqse qrfqqqpfvm
      601 vvsssnnfps dvqvkqenep lepnlyc
//
LOCUS       XP_041322900             627 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322900
VERSION     XP_041322900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="ETS-related transcription factor Elf-1 isoform
                     X1"
                     /calculated_mol_wt=68565
     Region          2..109
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          204..286
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     Region          <361..531
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     CDS             1..627
                     /gene="ELF1"
                     /coded_by="XM_041466966.1:264..2147"
                     /db_xref="GeneID:121353262"
ORIGIN      
        1 maavvqqnel vfefasnvme deqqlgdpsi fpavivehvp saellhnysg ltcvdepsdm
       61 itensldvae eqiiedddit ltveaschng detmetieaa eallnmdspd pmldekrmtt
      121 mfgapeeeem vppithvsvt ldgipevvev hqapdpyaes petpefeqpk kkkgkkpkps
      181 rsesptttpn isvkkknkdg kgntiylwef llallqdkat cpkyikwtqr ekgifklvds
      241 kavsrlwgkh knkpdmnyet mgralryyyq rgilakvegq rlvyqfkdmp kdliyidded
      301 aspstessds tllspavanr nqssrtrasa nagtkggsas vvktgnskpa klkeqvevvq
      361 qqtpgltsea lrtmqspqpv qptqlfrtvh vmqplqplte gqaavtsnvp deslnssvqn
      421 isrtlqtptq vpvvvspgnq qlhavtlqtv plttviastd pasvttaqkf ilqaiptsqp
      481 mtvlkeniml qsqkpvspps sivlspaqvq qvltssvqti cngtvnmass psfsattpvv
      541 tfspsssqvv sqpsgtvits vikapdtkqv glqeeekees dkvedaeqse qrfqqqpfvm
      601 vvsssnnfps dvqvkqenep lepnlyc
//
LOCUS       XP_041322901             626 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322901
VERSION     XP_041322901.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466967.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..626
                     /product="ETS-related transcription factor Elf-1 isoform
                     X2"
                     /calculated_mol_wt=68478
     Region          2..109
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          204..286
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     Region          <361..530
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     CDS             1..626
                     /gene="ELF1"
                     /coded_by="XM_041466967.1:373..2253"
                     /db_xref="GeneID:121353262"
ORIGIN      
        1 maavvqqnel vfefasnvme deqqlgdpsi fpavivehvp saellhnysg ltcvdepsdm
       61 itensldvae eqiiedddit ltveaschng detmetieaa eallnmdspd pmldekrmtt
      121 mfgapeeeem vppithvsvt ldgipevvev hqapdpyaes petpefeqpk kkkgkkpkps
      181 rsesptttpn isvkkknkdg kgntiylwef llallqdkat cpkyikwtqr ekgifklvds
      241 kavsrlwgkh knkpdmnyet mgralryyyq rgilakvegq rlvyqfkdmp kdliyidded
      301 aspstessds tllspavanr nqssrtrasa nagtkggsas vvktgnskpa klkeqvevvq
      361 qqtpgltsea lrtmqspqpv qptqlfrtvh vmqplqplte gqaavtsnvp deslnssvqn
      421 irtlqtptqv pvvvspgnqq lhavtlqtvp lttviastdp asvttaqkfi lqaiptsqpm
      481 tvlkenimlq sqkpvsppss ivlspaqvqq vltssvqtic ngtvnmassp sfsattpvvt
      541 fspsssqvvs qpsgtvitsv ikapdtkqvg lqeeekeesd kvedaeqseq rfqqqpfvmv
      601 vsssnnfpsd vqvkqenepl epnlyc
//
LOCUS       XP_041322902             393 aa            linear   VRT 06-MAY-2021
DEFINITION  WW domain-binding protein 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322902
VERSION     XP_041322902.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466968.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="WW domain-binding protein 4 isoform X1"
                     /calculated_mol_wt=44496
     Region          8..44
                     /region_name="zf-U1"
                     /note="U1 zinc finger; pfam06220"
                     /db_xref="CDD:368798"
     Region          130..>207
                     /region_name="PRP40"
                     /note="Splicing factor [RNA processing and modification];
                     COG5104"
                     /db_xref="CDD:227435"
     CDS             1..393
                     /gene="WBP4"
                     /coded_by="XM_041466968.1:51..1232"
                     /db_xref="GeneID:121353263"
ORIGIN      
        1 madywksqpk kfcdyckcwi adnrpsiefh ergknhkenv akriseikkk slekakeeen
       61 mskefaamee aamkayqedm krlgikpddv gssstqsktq sntvetkakk ekkekkekke
      121 kkkktppdas mpskietkew vqglspegyt yyyntktges qwekpkgfqg nsqnsqtgae
      181 wvegvtedgh tyyyntqtgv stwekpdgfv sssnekgqrd kpaetasesd sedsedeaes
      241 setnfkrkgd ngeeseegkk spkakklspy gkwrevksee ttdkeestsa sqeysgdgsn
      301 knnpygkwka lkevgeeqee eeeggekvdl elpstesdnv appvledpee etvifkektv
      361 tslgdltegv ptfkkrkfen gksrnlrqrl sdq
//
LOCUS       XP_041322903             333 aa            linear   VRT 06-MAY-2021
DEFINITION  WW domain-binding protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322903
VERSION     XP_041322903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="WW domain-binding protein 4 isoform X2"
                     /calculated_mol_wt=37269
     Region          70..>147
                     /region_name="PRP40"
                     /note="Splicing factor [RNA processing and modification];
                     COG5104"
                     /db_xref="CDD:227435"
     CDS             1..333
                     /gene="WBP4"
                     /coded_by="XM_041466969.1:156..1157"
                     /db_xref="GeneID:121353263"
ORIGIN      
        1 mskefaamee aamkayqedm krlgikpddv gssstqsktq sntvetkakk ekkekkekke
       61 kkkktppdas mpskietkew vqglspegyt yyyntktges qwekpkgfqg nsqnsqtgae
      121 wvegvtedgh tyyyntqtgv stwekpdgfv sssnekgqrd kpaetasesd sedsedeaes
      181 setnfkrkgd ngeeseegkk spkakklspy gkwrevksee ttdkeestsa sqeysgdgsn
      241 knnpygkwka lkevgeeqee eeeggekvdl elpstesdnv appvledpee etvifkektv
      301 tslgdltegv ptfkkrkfen gksrnlrqrl sdq
//
LOCUS       XP_041322904             333 aa            linear   VRT 06-MAY-2021
DEFINITION  WW domain-binding protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322904
VERSION     XP_041322904.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466970.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="WW domain-binding protein 4 isoform X2"
                     /calculated_mol_wt=37269
     Region          70..>147
                     /region_name="PRP40"
                     /note="Splicing factor [RNA processing and modification];
                     COG5104"
                     /db_xref="CDD:227435"
     CDS             1..333
                     /gene="WBP4"
                     /coded_by="XM_041466970.1:213..1214"
                     /db_xref="GeneID:121353263"
ORIGIN      
        1 mskefaamee aamkayqedm krlgikpddv gssstqsktq sntvetkakk ekkekkekke
       61 kkkktppdas mpskietkew vqglspegyt yyyntktges qwekpkgfqg nsqnsqtgae
      121 wvegvtedgh tyyyntqtgv stwekpdgfv sssnekgqrd kpaetasesd sedsedeaes
      181 setnfkrkgd ngeeseegkk spkakklspy gkwrevksee ttdkeestsa sqeysgdgsn
      241 knnpygkwka lkevgeeqee eeeggekvdl elpstesdnv appvledpee etvifkektv
      301 tslgdltegv ptfkkrkfen gksrnlrqrl sdq
//
LOCUS       XP_041322905             323 aa            linear   VRT 06-MAY-2021
DEFINITION  dehydrogenase/reductase SDR family member 12 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322905
VERSION     XP_041322905.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466971.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="dehydrogenase/reductase SDR family member 12
                     isoform X1"
                     /calculated_mol_wt=35994
     Region          40..293
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(47,49..50,52,71..73,125..127,179..181,201,205,
                     229..232)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187535"
     Site            order(147,181,201,205)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..323
                     /gene="DHRS12"
                     /coded_by="XM_041466971.1:28..999"
                     /db_xref="GeneID:121353265"
ORIGIN      
        1 mswyrntvwf vkglreytrg gyesaskrfn padvevdvag rsflvtgans gigkatakei
       61 arrggtvhlv crnkeraeva keelvtetgn qniflhivdi snpkeiwkfa ekfqsehkln
      121 vlinnagcmv nnreltedgl eknfatntlg tyimttallp llekaadarv itvssggmlv
      181 qklnvsdlqs esgpfdgtmv yaqnkrqqvv lteqwakahr nihfsvmhpg wadtpavrss
      241 mpdfyermkn slrteaqgad tvlwlavsae atklpsglff qdrqpvpthl playthsppe
      301 deeklmemle efsqkfksvs pgi
//
LOCUS       XP_041322906             288 aa            linear   VRT 06-MAY-2021
DEFINITION  dehydrogenase/reductase SDR family member 12 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322906
VERSION     XP_041322906.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466972.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="dehydrogenase/reductase SDR family member 12
                     isoform X2"
                     /calculated_mol_wt=32310
     Region          40..258
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     CDS             1..288
                     /gene="DHRS12"
                     /coded_by="XM_041466972.1:28..894"
                     /db_xref="GeneID:121353265"
ORIGIN      
        1 mswyrntvwf vkglreytrg gyesaskrfn padvevdvag rsflvtgans gigkatakei
       61 arrggtvhlv crnkeraeva keelvtetgn qniflhivdi snpkeiwkfa ekfqsehkln
      121 vlinnagcmv nnreltedgl eknfatntlg tyimttallp llekaadarv rqqvvlteqw
      181 akahrnihfs vmhpgwadtp avrssmpdfy ermknslrte aqgadtvlwl avsaeatklp
      241 sglffqdrqp vpthlplayt hsppedeekl memleefsqk fksvspgi
//
LOCUS       XP_041322907             195 aa            linear   VRT 06-MAY-2021
DEFINITION  dehydrogenase/reductase SDR family member 12 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322907
VERSION     XP_041322907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466973.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..195
                     /product="dehydrogenase/reductase SDR family member 12
                     isoform X3"
                     /calculated_mol_wt=21640
     Region          <1..165
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(19,53,73,77)
                     /site_type="active"
                     /db_xref="CDD:187535"
     CDS             1..195
                     /gene="DHRS12"
                     /coded_by="XM_041466973.1:98..685"
                     /db_xref="GeneID:121353265"
ORIGIN      
        1 mvnnrelted gleknfatnt lgtyimttal lpllekaada rvitvssggm lvqklnvsdl
       61 qsesgpfdgt mvyaqnkrqq vvlteqwaka hrnihfsvmh pgwadtpavr ssmpdfyerm
      121 knslrteaqg adtvlwlavs aeatklpsgl ffqdrqpvpt hlplaythsp pedeeklmem
      181 leefsqkfks vspgi
//
LOCUS       XP_041322909             400 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat and FYVE domain-containing protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322909
VERSION     XP_041322909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..400
                     /product="WD repeat and FYVE domain-containing protein 2
                     isoform X1"
                     /calculated_mol_wt=44883
     Region          16..272
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(23,41,45,51,53,65,85,89,95,100,112..113,130,135,
                     141..142,171,176,182..183,197..198,216,220,226..227,
                     240..241,258,263,269..270)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          27..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          72..132
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          202..239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          246..303
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          279..348
                     /region_name="FYVE_WDFY1_like"
                     /note="FYVE domain found in WD40 repeat and FYVE
                     domain-containing protein WDFY1 and WDFY2, and similar
                     proteins; cd15718"
                     /db_xref="CDD:277258"
     Site            order(281,285,310..315,317..318,342..344)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277258"
     Region          318..363
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          369..395
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..400
                     /gene="WDFY2"
                     /coded_by="XM_041466975.1:73..1275"
                     /db_xref="GeneID:121353266"
ORIGIN      
        1 maaepqpkal trkplllnkv egsqevvnma aivpkedgvi svsedrtvrv wlkrdsgqyw
       61 psiyhampsp cscmsfnpet rrlsigldng tisefilsed ynkmtlvksy qahqsrvimi
      121 lfvlemewvl stgqdkhftw hcsesgqrlg gyrtsagacg lqfdvetrhv fvgdhsgqvt
      181 ilkleqescs lvttfkghtg gvtalcwdpi qrvlfsgssd hsiimwdigg rkgtaielqg
      241 hndkvqslsy ahhtrqlisc gadggivvwn mdverqetpe wldsdscqkc dqpffwnfkq
      301 mwdskkiglr qhhcrkcgka vcgkcsskrs siplmgfefe vrvcdsches itdeerapta
      361 tfhdskhniv hvhfdatrgw lltsgtdkvi klwdmtpvvs
//
LOCUS       XP_041322910             334 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat and FYVE domain-containing protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322910
VERSION     XP_041322910.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466976.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="WD repeat and FYVE domain-containing protein 2
                     isoform X2"
                     /calculated_mol_wt=37497
     Region          6..46
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <34..206
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          51..84
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          136..173
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          180..237
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="FYVE_WDFY1_like"
                     /note="FYVE domain found in WD40 repeat and FYVE
                     domain-containing protein WDFY1 and WDFY2, and similar
                     proteins; cd15718"
                     /db_xref="CDD:277258"
     Site            order(215,219,244..249,251..252,276..278)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277258"
     Region          252..297
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          303..329
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..334
                     /gene="WDFY2"
                     /coded_by="XM_041466976.1:147..1151"
                     /db_xref="GeneID:121353266"
ORIGIN      
        1 mpspcscmsf npetrrlsig ldngtisefi lsedynkmtl vksyqahqsr vimilfvlem
       61 ewvlstgqdk hftwhcsesg qrlggyrtsa gacglqfdve trhvfvgdhs gqvtilkleq
      121 escslvttfk ghtggvtalc wdpiqrvlfs gssdhsiimw diggrkgtai elqghndkvq
      181 slsyahhtrq liscgadggi vvwnmdverq etpewldsds cqkcdqpffw nfkqmwdskk
      241 iglrqhhcrk cgkavcgkcs skrssiplmg fefevrvcds chesitdeer aptatfhdsk
      301 hnivhvhfda trgwlltsgt dkviklwdmt pvvs
//
LOCUS       XP_041322911             524 aa            linear   VRT 06-MAY-2021
DEFINITION  importin subunit alpha-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322911
VERSION     XP_041322911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466977.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..524
                     /product="importin subunit alpha-4"
                     /calculated_mol_wt=57867
     Region          10..524
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          76..101
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          112..145
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(136,140,144,178,182,186,221,225,229)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          153..189
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          195..230
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          247..272
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          282..314
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(305,309,313,347,351,355,389,393,397)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          322..358
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          364..398
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          407..441
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..524
                     /gene="KPNA3"
                     /coded_by="XM_041466977.1:112..1686"
                     /db_xref="GeneID:121353268"
ORIGIN      
        1 maenaaatgl eshriksfkn kgrdaetmrr hrnevtielr knkrdehllk krnvpqeesl
       61 edsdvdadfk aqnvtleail qnatsdnpvi qlsavqaark llssdrnppi ddliksgilp
      121 ilvkclerdd npslqfeaaw altniasgts aqtqavvqsn avplflrllh sphqnvceqa
      181 vwalgniigd gpqcrdyvis lgvvkpllsf inpsipitfl rnvtwvivnl crnkdppppm
      241 etvqeilpal cvliyhtdin ilvdtvwals yltdggneqi qmvidsgvvp flvpllshqe
      301 vkvqtaalra vgnivtgtde qtqvvlncdv lsyfphllth pkekinkeav wflsnitagn
      361 qqqvqavida glipmiihql akgdfgtqke aawaisnlti sgrkdqveyl vqqnvippfc
      421 nllsvkdsqv vqvvldglkn ilimagdeas tiaeiieecg glekiealqq henediykla
      481 feiidqyfsg ddidedpsli peatqggtyn fdptanlqtk efnf
//
LOCUS       XP_041322912             261 aa            linear   VRT 06-MAY-2021
DEFINITION  integral membrane protein 2B [Pyrgilauda ruficollis].
ACCESSION   XP_041322912
VERSION     XP_041322912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466978.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="integral membrane protein 2B"
                     /calculated_mol_wt=29819
     Region          131..225
                     /region_name="BRICHOS"
                     /note="The BRICHOS domain is found in a variety of
                     proteins implicated in dementia, respiratory distress and
                     cancer; smart01039"
                     /db_xref="CDD:198107"
     CDS             1..261
                     /gene="ITM2B"
                     /coded_by="XM_041466978.1:147..932"
                     /db_xref="GeneID:121353269"
ORIGIN      
        1 mvkvsfnsal aqkeaakkee ensqvlilpp dakdpedpvp vgqrrawcwc mcfglafmla
       61 gvflggayly kyfafqqggv yfcgikyied glslpepgae aqtaryhtie qniqileeed
      121 vefisvpvpe fadsdpadiv hdfhrrltay ldlsldkcyv iplntsvvmp pknflellin
      181 ikagtylpqs yliheqmivt drienvdqlg ffiyrlcrgk etyklqrkea mkgiqkreai
      241 ncrkirhfen kfametlice q
//
LOCUS       XP_041322913             262 aa            linear   VRT 06-MAY-2021
DEFINITION  general transcription factor IIF subunit 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322913
VERSION     XP_041322913.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466979.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="general transcription factor IIF subunit 2"
                     /calculated_mol_wt=29650
     Region          5..131
                     /region_name="TFIIF_beta"
                     /note="Transcription initiation factor IIF, beta subunit;
                     cd07980"
                     /db_xref="CDD:259828"
     Site            order(5,11,13,18..25,28,31,34,39..47,53,90..100,117,
                     119..120,126)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:259828"
     Region          189..253
                     /region_name="TFIIF_beta"
                     /note="TFIIF, beta subunit HTH domain; pfam02270"
                     /db_xref="CDD:426691"
     CDS             1..262
                     /gene="GTF2F2"
                     /coded_by="XM_041466979.1:90..878"
                     /db_xref="GeneID:121353270"
ORIGIN      
        1 msdkgeldlt gakqntgmwl vkvpkylsqq wskasgrgev gklrivknqg rtevsftlne
       61 elasindigg kpasvsapre hpfllqsvgg qtltvftets venqseekse sgsadklale
      121 givvqraecr paasenymkl krlqieessk pvrlsqqldk avttnykpva nhqynieyek
      181 kkkedgkrar adkqqvldml fsafekhqyy nikdlvditk qpviylkeil reigiynvkg
      241 thkntwelkp eyrhyqgeek sd
//
LOCUS       XP_041322915             257 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein KCTD4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322915
VERSION     XP_041322915.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466981.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="BTB/POZ domain-containing protein KCTD4"
                     /calculated_mol_wt=29492
     Region          32..117
                     /region_name="BTB_POZ_KCTD4"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     channel tetramerization domain-containing protein 4
                     (KCTD4); cd18364"
                     /db_xref="CDD:349673"
     Region          136..257
                     /region_name="KCTD4_C"
                     /note="BTB/POZ domain-containing protein KCTD4 C-terminus;
                     pfam19323"
                     /db_xref="CDD:437155"
     CDS             1..257
                     /gene="KCTD4"
                     /coded_by="XM_041466981.1:164..937"
                     /db_xref="GeneID:121353271"
ORIGIN      
        1 merkasrren eceeknsnse sseldkdykt slitlnvggy lyitqkqtlt kypdsflegi
       61 ingrimcpfd adghyfidrd gllfrhilnf lrngelllpe gfrenqllaq eaeffqlkvl
      121 seavksrwek eqlasrettf leitdshdrs qglrifcnap efiakiksri vlvsksrldg
      181 fpeefsvssn iiqfkyfiks engtrlvlke dntfvctlet lkfeaimtal kcgfrlltsl
      241 dcsrgsivhs dalhfik
//
LOCUS       XP_041322916             172 aa            linear   VRT 06-MAY-2021
DEFINITION  translationally-controlled tumor protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322916
VERSION     XP_041322916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466982.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="translationally-controlled tumor protein"
                     /calculated_mol_wt=19386
     Region          1..167
                     /region_name="TCTP"
                     /note="Translationally controlled tumour protein;
                     pfam00838"
                     /db_xref="CDD:459957"
     CDS             1..172
                     /gene="TPT1"
                     /coded_by="XM_041466982.1:145..663"
                     /db_xref="GeneID:121353272"
ORIGIN      
        1 miiyrdcisq demfsdiyki revadglcle vegkmvtrte gqiddsligg nasaegpegd
       61 gteatvitgv divinhhlqe tsftkesykk yikdymkaik arleehkper vkpfmtgaae
      121 qikhilanfk nyqffvgenm npdgmvalld fredgvtpym iffkdgleie kc
//
LOCUS       XP_041322917             937 aa            linear   VRT 06-MAY-2021
DEFINITION  proline and serine-rich protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322917
VERSION     XP_041322917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466983.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..937
                     /product="proline and serine-rich protein 1 isoform X1"
                     /calculated_mol_wt=94769
     Region          29..121
                     /region_name="DUF4476"
                     /note="Domain of unknown function (DUF4476); pfam14771"
                     /db_xref="CDD:434196"
     Region          <185..683
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <671..755
                     /region_name="PLN02217"
                     /note="probable pectinesterase/pectinesterase inhibitor"
                     /db_xref="CDD:215130"
     CDS             1..937
                     /gene="PROSER1"
                     /coded_by="XM_041466983.1:71..2884"
                     /db_xref="GeneID:121353273"
ORIGIN      
        1 mdkksfetvl deirkavlte yklkaieyvh gyfsseqvve llryfswaep qlkaikalqh
       61 kivavpaskm vnilncftfs kdklialeil asnivdaqny rliedlfrin msekkrcrri
      121 leqasktgck aphamisscg mipgnpypkg kpsringifp gtpikkdtee ctnegkgiaa
      181 rilgpskpap stynphkpvp ypippcrpha tiapsaynna glvpmanvia pglpapppyt
      241 anqvvsened lssqakssqn qafsaqtnql ftphgsnpst paatpvptps pvkaishpla
      301 patplisgms mstpvlpvfp gqvsssihts qpstptptvi kslslpgvpv tsvhsatstp
      361 ipsvfsglas ipaampapqg sstpcatpap teafasaatp faglpfsats svasannpap
      421 lssvfaglpl slppnaqgis spvpstians pattipgsls lpnpilsvlk gfltsndtsl
      481 inssalpsav tselaslsal anqssdppts svnkcytpsa tpntqrsstp glaifpglps
      541 psvanssstp ptlpaqsplt tspsimpvnc gssasllhgt sptnpdqqls sapaatsipv
      601 lvktepmspt lsafkgpshs aspshgalgl pglgraytsa asvpvslpss lnpalsglss
      661 lsaplnnssl asislaphgs sapiapvfng lppftsltsn faftgnpalt ppvtlpgsll
      721 atpatsaspv saphvsstaa vlsglaasat vsappfslnl ssavpslfsv aqgplgssnp
      781 sfpgfpvsnt psvtpalpsf pglqassava avaplpaaat apspapvlpg fasafssnfn
      841 salvaqaglt sglqtpgnav fpgllslpgi pgfpqsaaqs slqelqhsaa aqsallqahs
      901 asalenytaq pegfanypst pgtpfslqts lpqsgwq
//
LOCUS       XP_041322918             898 aa            linear   VRT 06-MAY-2021
DEFINITION  proline and serine-rich protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322918
VERSION     XP_041322918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466984.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..898
                     /product="proline and serine-rich protein 1 isoform X2"
                     /calculated_mol_wt=90677
     Region          29..121
                     /region_name="DUF4476"
                     /note="Domain of unknown function (DUF4476); pfam14771"
                     /db_xref="CDD:434196"
     Region          <185..683
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <671..755
                     /region_name="PLN02217"
                     /note="probable pectinesterase/pectinesterase inhibitor"
                     /db_xref="CDD:215130"
     CDS             1..898
                     /gene="PROSER1"
                     /coded_by="XM_041466984.1:71..2767"
                     /db_xref="GeneID:121353273"
ORIGIN      
        1 mdkksfetvl deirkavlte yklkaieyvh gyfsseqvve llryfswaep qlkaikalqh
       61 kivavpaskm vnilncftfs kdklialeil asnivdaqny rliedlfrin msekkrcrri
      121 leqasktgck aphamisscg mipgnpypkg kpsringifp gtpikkdtee ctnegkgiaa
      181 rilgpskpap stynphkpvp ypippcrpha tiapsaynna glvpmanvia pglpapppyt
      241 anqvvsened lssqakssqn qafsaqtnql ftphgsnpst paatpvptps pvkaishpla
      301 patplisgms mstpvlpvfp gqvsssihts qpstptptvi kslslpgvpv tsvhsatstp
      361 ipsvfsglas ipaampapqg sstpcatpap teafasaatp faglpfsats svasannpap
      421 lssvfaglpl slppnaqgis spvpstians pattipgsls lpnpilsvlk gfltsndtsl
      481 inssalpsav tselaslsal anqssdppts svnkcytpsa tpntqrsstp glaifpglps
      541 psvanssstp ptlpaqsplt tspsimpvnc gssasllhgt sptnpdqqls sapaatsipv
      601 lvktepmspt lsafkgpshs aspshgalgl pglgraytsa asvpvslpss lnpalsglss
      661 lsaplnnssl asislaphgs sapiapvfng lppftsltsn faftgnpalt ppvtlpgsll
      721 atpatsaspv saphvsstaa vlsglaasat vsappfslnl ssavpslfsv aqgplgssnp
      781 sfpgfpvsnt psvtpalpsf pglqassava avaplpaaat apspapvlpg fasafssnfn
      841 salvaqaglt sglqtpgnav fpgllslpgi pgfpqsaaqs slqelqhsaa aqsallqe
//
LOCUS       XP_041322919             329 aa            linear   VRT 06-MAY-2021
DEFINITION  NHL repeat-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322919
VERSION     XP_041322919.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466985.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="NHL repeat-containing protein 3"
                     /calculated_mol_wt=35789
     Region          65..326
                     /region_name="NHL"
                     /note="NHL repeat unit of beta-propeller proteins;
                     cl18310"
                     /db_xref="CDD:302697"
     Region          97..143
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     Region          156..195
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     Region          203..240
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     Region          250..294
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     Region          300..325
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271328"
     CDS             1..329
                     /gene="NHLRC3"
                     /coded_by="XM_041466985.1:47..1036"
                     /db_xref="GeneID:121353274"
ORIGIN      
        1 magtvlalla llallggsqv lkaeyfspwn geqqmykldi gwpktpehft gqtfcvavds
       61 lhglvyvgqr gdnvpkvlvf seegyflhsw ndtvemphgi fvwntatgss vwitdvgtgk
      121 yghtvkqysp lgklmqvlgt pgnagsslip lqfdqpadif veetgeiyvv dgdggmnnrl
      181 lklsddykei wltgtngsgi gqfkiphsvt vdafgrvwva drgnkriqvf dkvtgewlgs
      241 wngcfsedgp ysvrftadyk ylivaqlnin rlailaappv gsigdcaivh svqladetkp
      301 hlvdvdmrsg avyvaeigaq qvqkyvpls
//
LOCUS       XP_041322920             148 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily C member 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041322920
VERSION     XP_041322920.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466986.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..148
                     /product="dnaJ homolog subfamily C member 15"
                     /calculated_mol_wt=15731
     Region          38..142
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cl02542"
                     /db_xref="CDD:413365"
     CDS             1..148
                     /gene="DNAJC15"
                     /coded_by="XM_041466986.1:34..480"
                     /db_xref="GeneID:121353275"
ORIGIN      
        1 megaaasaeg lryaeyarap tgagkgqael drglartmia lglgiatvaf agryafrvwk
       61 pleqtiteaa kristsslss yykggfeqkm srreaslilg vspsagkdki rtahrkimil
      121 nhpdkggspy latkineakd llessakn
//
LOCUS       XP_041322921            1189 aa            linear   VRT 06-MAY-2021
DEFINITION  protein diaphanous homolog 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322921
VERSION     XP_041322921.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466987.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1189
                     /product="protein diaphanous homolog 3"
                     /calculated_mol_wt=135713
     Region          104..286
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          294..481
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          634..1006
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1189
                     /gene="DIAPH3"
                     /coded_by="XM_041466987.1:1..3570"
                     /db_xref="GeneID:121353276"
ORIGIN      
        1 mepprpryca pssppgrggr enkglrrkgp pgtgsaggpe eaadsrkpkf hlniktltdd
       61 vldrfasiri prskkerppl phmkqshstd wsstpmdped fatkplsere iialfekmme
      121 dmnlnedkkm plrekdfntk kemvmqyist asksgslkns rkispqefiq dlksgstder
      181 lvtcleslrv sltsnpvswv enfgqeglgl lldvlerlve tknqdrlvkr sqhkviqclr
      241 afmnnkygle rilgeersll lltkaidpkq tnmmtdivkl lsamcivgee nilekileav
      301 taaaeernvd rfspiveglq dnsvqlqvac mqlinalvts pddldfrlhi rnefmrsglk
      361 eilpqlqcik nealdiqlkv fnehkeedmi efshrledir seldevndvy nmvwntvkdt
      421 saegyflsil qhlllirndy firpqyfkli eecvsqivlh rsgtdpdfty rkrldinfsh
      481 lldvcvdkar leeceerase lsrkfekdfv vhqetqallq kkeerinqle telqafksqy
      541 gpvppgflss thgdasvvpl egaglhpfsp ppppplpsng aipppppppp pppllnslga
      601 plgfggappp pplpglpgiq wsppscalpf gmkpkkefkp evtmkrlnws kirpqemtes
      661 cfwvkaeedk yenadmlckl eltfccqkrv kreeedfeek ksikkrikel kvldpkiaqn
      721 lsiflgsfrv pyeeiktmil evdetqlses miqnlikhlp eqeqlnalsk fkneynnlse
      781 peqfgvvmsn vkrlrprlsa ilfklqfeeq vnnikpdima vsaaceeikk sksfskllel
      841 vllmgnymna gsrnaqtfgy nlsslcklkd tksadqkttl lhflvevcee syqdvlnfve
      901 dfqhldkask vsaenleksl khmerqlqql ekdlqtfpvp edkhdkfvak mssflvhake
      961 dfqklsrmhe nmeklyqnvm gyyaidlkkv sveefltdln nfrmmfmqav kenvrrreae
     1021 ekqrrakiak ekaekekler qqkkkrllem ktegeetgvm dsllealqsg aafrdrrkrt
     1081 prskdtpqnl spttqrpvlk acnhenqkgq pekpcshhsi tlnstrsplt kevtydvets
     1141 skglnravgr keachgeggk ekkmdrigsp pkgeaipeve allarlral
//
LOCUS       XP_041322923             764 aa            linear   VRT 06-MAY-2021
DEFINITION  protein associated with UVRAG as autophagy enhancer [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322923
VERSION     XP_041322923.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466989.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..764
                     /product="protein associated with UVRAG as autophagy
                     enhancer"
                     /calculated_mol_wt=83946
     Region          552..751
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..764
                     /gene="RUBCNL"
                     /coded_by="XM_041466989.1:101..2395"
                     /db_xref="GeneID:121353277"
ORIGIN      
        1 mslhavafas fsrtevfkhp cseklnhesl kvaftdsacs snpsvriscl aptpqisvls
       61 dessrpavig hagsfgsypg saeaikdilm svlnasglkp slvleqstmq gaehpdsdve
      121 qweesstgds hddsdsdsah hsaactqtdi rftrpracwn ntacdspkps ldtfscpryt
      181 dgdpaassln gctlssvspl krdcftqvtl tggtvtsavv hsgkesstsp erdlaftrll
      241 sdstvakadl vkypqamepa plssrdsdsp sglsqpepvn ptgstcplsi saiplnrslq
      301 dvcmlpedve kenahffvad miiaslekmk cnilsqqqae swgveetsgs dgsyhtdsel
      361 ssypgvkksd ssvtssdsgy egsallpvss pvhlpshhev trfhchsdse deyviieled
      421 lenlsvtpdk rssfepgsns aeataqelcr afrkywlqtd savqlsgcls sskqrsvlke
      481 eiprelessl nlaeeikiis klrgssgwsp prsqiifnih psvkrdavva aqnftcvgcg
      541 tpieskyirr lrycdylgky fcdcchsyaq ssiparilsk wdfkkyyvcn fskhllesiw
      601 qhpifnvsci nktlytkske mdrvrevqeq lfhlkkllkt crfaesvlke feqvpshlte
      661 elhlfslddl vkikrgqllp llkdilksst shvdgcelcq akgficefcq sadllfpyqt
      721 arckrcpeck tcfhkacfks ggcpkclris arrtlsetps lapq
//
LOCUS       XP_041322924             130 aa            linear   VRT 06-MAY-2021
DEFINITION  regulator of cell cycle RGCC [Pyrgilauda ruficollis].
ACCESSION   XP_041322924
VERSION     XP_041322924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466990.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..130
                     /product="regulator of cell cycle RGCC"
                     /calculated_mol_wt=13552
     Region          1..130
                     /region_name="RGCC"
                     /note="Response gene to complement 32 protein family;
                     pfam15151"
                     /db_xref="CDD:464535"
     CDS             1..130
                     /gene="RGCC"
                     /coded_by="XM_041466990.1:66..458"
                     /db_xref="GeneID:121353278"
ORIGIN      
        1 mkspaaqspa gqapgedggg laealgefda vlaefscpag rrrffygehl ermkrrssas
       61 vsdgsglsds esadslyrns fslsdeklns stastpslps psvtpckakl gdtkeledfi
      121 adldrtlasm
//
LOCUS       XP_041322925             826 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322925
VERSION     XP_041322925.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466991.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..826
                     /product="conserved oligomeric Golgi complex subunit 3"
                     /calculated_mol_wt=93763
     Region          129..272
                     /region_name="Sec34"
                     /note="Sec34-like family; pfam04136"
                     /db_xref="CDD:461190"
     CDS             1..826
                     /gene="COG3"
                     /coded_by="XM_041466991.1:93..2573"
                     /db_xref="GeneID:121353279"
ORIGIN      
        1 mlepppaepp pagrdvrdrl slwdrrpqpt aplsdrqtds vlelkaaaen lpvpaelpie
       61 dlcsltsqsl pvllpaavpe stedvllkgf atlgmederi etaqqffswf aqvqtqmdqd
      121 egakyrqmrd ylsgfqeqcd ailndvnsal qhleslqkqy lfvstktgtl heaceqllke
      181 qselvdlaen iqqklsyfne lenintklns ptlsvnsegf ipmlaklddc iayisshpnf
      241 kdypvyltkf kqclskamhl iktytvntlq nlttqlmkrd psavpnsdna ftlfyvkfra
      301 aapkvrtlie qveqrsekmp eyqqvlneih qcyldqrell lgpsiastvt eltsqnnrdh
      361 calvrsgcaf mvhvcqdehq lynefftkpt pkldellekl clslydvlrp miihvihlet
      421 lselcgilkn emledhvqnn aeqlgafaag vkqmledvqe rlvyrthiyi qtditgykpa
      481 pgdlaypdkl emmeqiaqsl keeqkklpse asfsdvrled pescslvksg saeslnprhq
      541 stispadlhg mwyptvrrtl vclsklyrci dravfqglsq ealsaciqsl lgaadsiskn
      601 ktqvdgqlfl ikhllilreq iapfhtdfti keisldlkkt rdaafkilnp kavsrffrln
      661 snnaliqfll egtpeirehy idskkdvdrh lksaceqfiq qqtkqfidql eefmtkvaal
      721 ktmatqggpn yslsqqpwaq pakindliss tyktiktklp stlrsmslyl snkdtelilf
      781 kpvrnniqqm fqklhallke efsnedlqii acpsmeqvnl llsmsk
//
LOCUS       XP_041322926            3164 aa            linear   VRT 06-MAY-2021
DEFINITION  FRAS1-related extracellular matrix protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322926
VERSION     XP_041322926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466992.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3164
                     /product="FRAS1-related extracellular matrix protein 2
                     isoform X1"
                     /calculated_mol_wt=350018
     Region          49..265
                     /region_name="Frem_N"
                     /note="Frem protein N-terminal domain; pfam19309"
                     /db_xref="CDD:466034"
     Region          <315..375
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          401..517
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          521..664
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          671..778
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          808..913
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          915..1030
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1045..1162
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1166..1276
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1278..1393
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1398..1506
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1508..1615
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1633..1745
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          <1763..>1976
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     Region          2002..2094
                     /region_name="Calx-beta"
                     /note="Calx-beta domain; cl02522"
                     /db_xref="CDD:413355"
     Region          <2113..>2335
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..3164
                     /gene="FREM2"
                     /coded_by="XM_041466992.1:346..9840"
                     /db_xref="GeneID:121353280"
ORIGIN      
        1 mqplpagprr llagllllla gcawagaaep ppgnsaavss pwspeadpvv vanrglrvpl
       61 grsawldpar dlvlqvqpgd rchltvlded plwqrpgrls prrfpcdfga revqyshlgg
      121 rspardrvrl qlrydspsra lvlplvleve vlftqleivt rnlpltverl rgtsnpldar
      181 slefafepgr qrcrvgllpl laglprygei lnyppaatgg ggeaagggpm psvmwdceef
      241 lrlglryrht aaggspnrdl vplvaelrea agggallkre yfqvlvrira gsenvapkps
      301 flamlmmevd qfvltaltpd mlsaedaesp pdlllfnits pfgpgqghmv stddrslpvt
      361 sfsqrdvrel riayqppmed sdrerlfele levldpegaa sepfafvivv kpmntlapvv
      421 trntglvlye gqsrplsgpg pspnlvvsde ddleqvrvsv vaglrhghlt lledtpgpaa
      481 prkhftvael aagrviyqhd gsesplsdnl vlrledggsr hrveflfpit lvptddqppl
      541 lnantglama egetvpittr alsatdidsq daillftves gptagqlllr qaqpppgwee
      601 eeeedgfswr kvpgvagssl iyekpvrewl qqdivegrlf yhhfgahspg pgvvldqfif
      661 rvqddndppn rsgpqtfvir vhpvdrlape lhsssslhli vaeqqvtplr rkhlcytdqd
      721 sgdrelrytv iqpptdtdsn hppeaygarl gslvltedhs vevthftqaq inhhkisyrp
      781 pqeelgvaph liqfqyqvqd aagnaakgtf tiylqpvdnq ppeitntgft lpeggshvls
      841 paeldasdtd telarlrfil tqaprhgqlq lsgyslvpgg ifgledirqg rvvyvhsgae
      901 tnsdtcrldv sdgvhfvpit lkmsvhpvdd evptlrlppg tlgsyldvle ngaaeitanv
      961 iqgtdedtdd fmltfivedp pqhgsilvqg vpaerfsqrd lldgavvyah tggeigllpk
     1021 edafnltlsd lsekwrvrgn vvqgvsvlvt ilpvdsqape iflgeqfmvt egnkrvitla
     1081 hfraedvdtp sddilctiva qptsgyveni spapgseksr agvaisaftl kdlrqghify
     1141 vqsihkgvep vedrfalrcs dginfsqrhf fpifvvpind eepeiflref vvmegmslvi
     1201 dtpilnavda dvpadeltft itrlprhghi vnqlvngtvl vesftldqit essnilyehd
     1261 dsetradsfe vqlsdgkhtv rkmvpimvip vddetprmai ndgleieige trtinnrilk
     1321 atdldsedkt layiitygpg qgllqrikps ggvenisrgm nftqdevdrn liryvhfgqq
     1381 gvrdlikfdv tdginplidr yfyvtigsid ivfpdviskg vslkeggkvt lttdllstsd
     1441 lnspdenlvf titrppvrgh lectdqpgvp istftqllla gnkvyyihts edevkmdsfe
     1501 fevtdgynpv frtfrisisd vdnkkpvvti hnlvvseney klitpfelta edrdtsdall
     1561 kfvitqipvh gqiifnnskp vttftkqdln enlisykhdg sesvedsfsf tvtdgthtdf
     1621 yvfpntvfet rkpqtmkiri mavdnsvpqv vinkgaqtlr vlatghigfl itnkvlkved
     1681 rdslhvtlki ritegprhgf lihlgkgnhs isqftqadid dmkicyvlrg sdnatsdifh
     1741 flvedsggnk lknqhfrlnw awislekeyy lvnedtkyld vvlkrrgylg etsfisistk
     1801 dgtakkdkdf rgkaqkqvqf npgqtlatwr vrilsdgehe hsesfqivls epvmailefp
     1861 avstveiidp gdestvfipq stytieedig effipvrrsg dvsqelmvic ytqqgtasgt
     1921 aptsvlsysd yisrpedhns vlrfdkdere ktcriviidd slyeeaetfd vllsmpmggr
     1981 igaefpstri tivpdkddep afyfgndeyy vdesagyiev gvwrsgtdls kaasvtvrsr
     2041 ksepvtaeag vdyvgisrnl dfspgvnmqt frviilddlg qpvlegtekf elvlrmpmna
     2101 algepsktti findsvsdlp kmqfkesvyv anendgqvsa miyrsgdiry tstvrcytrq
     2161 gsaqvmmdfe erpntdssii tflpgetekp ctlvltddtf heeeeelrlv lgtprsdssf
     2221 gasigeqnet likirddadk aiikfgetkf svsepkdtrq vaivkipvlr lgdtskvsvv
     2281 rvhtkdgsat sgedyhpise eiefkegetq hfveievlfd gvremreaft vhlkpdenmv
     2341 aeiqtakaiv yieemnsmad vtfpsvpqva slliyddtsk akdrsspiag ypvicitacn
     2401 pkyedfdktg sicasesinn tltryrwlvs aptgpdgvts pmkevdfdtf ftsskmitld
     2461 siyfqagsrv qcaaravnsd gneglelmsp ivtistsegl cqprisgvvg aepfsaklry
     2521 tgpedpdyan likltvtmph idgmlpvist relsnfeltl spdgtrvgnh kcsnlldyte
     2581 vkthhgfltd atknpdvige tipyqyspti rgfntlrfyr nlnleaclwe fisyydmsel
     2641 ltdcggtigt dgqvlnlvqs yvtlrvplyv syvfhspvgv ggwqhfdlqs elrltfvydt
     2701 ailwkdgvgs ppeaelqgsl fptsmrisee grlvvnfkte arfhglfvms hpassltsmv
     2761 msadhpgltf slslirsept ynlpvqqwsf lsdfavrdys gtytvkliac ttaphqeysl
     2821 pvicnprepi tfdldirfqq vsdpvaaefs lntqmfllsk ktlwlsdgsm gfgqesdvaf
     2881 segdiiygrv mvdpvqnlgd sfycsiekvf lctgadgyvp kynpsnteyg cladspslly
     2941 rfkivdkaqp etqatsfgnv lfnaklaidd peaiplvkqp gsdgfkvdst plfqvslgre
     3001 wyvhtiytvr skenanrgig krsvehqyhs llsagspgas aqrrqkrgve qapelardig
     3061 vesnrgtniq hialdrtskk qvpqrevaln gvlprelnnq sagtslvtii ggaaaiflai
     3121 cliaiiilll kwkrnsdkke stnesgsnep mmlpnnyshd ssev
//
LOCUS       XP_041322927            3164 aa            linear   VRT 06-MAY-2021
DEFINITION  FRAS1-related extracellular matrix protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322927
VERSION     XP_041322927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3164
                     /product="FRAS1-related extracellular matrix protein 2
                     isoform X2"
                     /calculated_mol_wt=350046
     Region          49..265
                     /region_name="Frem_N"
                     /note="Frem protein N-terminal domain; pfam19309"
                     /db_xref="CDD:466034"
     Region          <315..375
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          401..517
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          521..664
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          671..778
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          808..913
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          915..1030
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1045..1162
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1166..1276
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1278..1393
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1398..1506
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1508..1615
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          1633..1745
                     /region_name="Cadherin_3"
                     /note="Cadherin-like; pfam16184"
                     /db_xref="CDD:465048"
     Region          <1763..>1976
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     Region          2002..2094
                     /region_name="Calx-beta"
                     /note="Calx-beta domain; cl02522"
                     /db_xref="CDD:413355"
     Region          <2113..>2335
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..3164
                     /gene="FREM2"
                     /coded_by="XM_041466993.1:346..9840"
                     /db_xref="GeneID:121353280"
ORIGIN      
        1 mqplpagprr llagllllla gcawagaaep ppgnsaavss pwspeadpvv vanrglrvpl
       61 grsawldpar dlvlqvqpgd rchltvlded plwqrpgrls prrfpcdfga revqyshlgg
      121 rspardrvrl qlrydspsra lvlplvleve vlftqleivt rnlpltverl rgtsnpldar
      181 slefafepgr qrcrvgllpl laglprygei lnyppaatgg ggeaagggpm psvmwdceef
      241 lrlglryrht aaggspnrdl vplvaelrea agggallkre yfqvlvrira gsenvapkps
      301 flamlmmevd qfvltaltpd mlsaedaesp pdlllfnits pfgpgqghmv stddrslpvt
      361 sfsqrdvrel riayqppmed sdrerlfele levldpegaa sepfafvivv kpmntlapvv
      421 trntglvlye gqsrplsgpg pspnlvvsde ddleqvrvsv vaglrhghlt lledtpgpaa
      481 prkhftvael aagrviyqhd gsesplsdnl vlrledggsr hrveflfpit lvptddqppl
      541 lnantglama egetvpittr alsatdidsq daillftves gptagqlllr qaqpppgwee
      601 eeeedgfswr kvpgvagssl iyekpvrewl qqdivegrlf yhhfgahspg pgvvldqfif
      661 rvqddndppn rsgpqtfvir vhpvdrlape lhsssslhli vaeqqvtplr rkhlcytdqd
      721 sgdrelrytv iqpptdtdsn hppeaygarl gslvltedhs vevthftqaq inhhkisyrp
      781 pqeelgvaph liqfqyqvqd aagnaakgtf tiylqpvdnq ppeitntgft lpeggshvls
      841 paeldasdtd telarlrfil tqaprhgqlq lsgyslvpgg ifgledirqg rvvyvhsgae
      901 tnsdtcrldv sdgvhfvpit lkmsvhpvdd evptlrlppg tlgsyldvle ngaaeitanv
      961 iqgtdedtdd fmltfivedp pqhgsilvqg vpaerfsqrd lldgavvyah tggeigllpk
     1021 edafnltlsd lsekwrvrgn vvqgvsvlvt ilpvdsqape iflgeqfmvt egnkrvitla
     1081 hfraedvdtp sddilctiva qptsgyveni spapgseksr agvaisaftl kdlrqghify
     1141 vqsihkgvep vedrfalrcs dginfsqrhf fpifvvpind eepeiflref vvmegmslvi
     1201 dtpilnavda dvpadeltft itrlprhghi vnqlvngtvl vesftldqit essnilyehd
     1261 dsetradsfe vqlsdgkhtv rkmvpimvip vddetprmai ndgleieige trtinnrilk
     1321 atdldsedkt layiitygpg qgllqrikps ggvenisrgm nftqdevdrn liryvhfgqq
     1381 gvrdlikfdv tdginplidr yfyvtigsid ivfpdviskg vslkeggkvt lttdllstsd
     1441 lnspdenlvf titrppvrgh lectdqpgvp istftqllla gnkvyyihts edevkmdsfe
     1501 fevtdgynpv frtfrisisd vdnkkpvvti hnlvvseney klitpfelta edrdtsdall
     1561 kfvitqipvh gqiifnnskp vttftkqdln enlisykhdg sesvedsfsf tvtdgthtdf
     1621 yvfpntvfet rkpqtmkiri mavdnsvpqv vinkgaqtlr vlatghigfl itnkvlkved
     1681 rdslhvtlki ritegprhgf lihlgkgnhs isqftqadid dmkicyvlrg sdnatsdifh
     1741 flvedsggnk lknqhfrlnw awislekeyy lvnedtkyld vvlkrrgylg etsfisistk
     1801 dgtakkdkdf rgkaqkqvqf npgqtlatwr vrilsdgehe hsesfqivls epvmailefp
     1861 avstveiidp gdestvfipq stytieedig effipvrrsg dvsqelmvic ytqqgtasgt
     1921 aptsvlsysd yisrpedhns vlrfdkdere ktcriviidd slyeeaetfd vllsmpmggr
     1981 igaefpstri tivpdkddep afyfgndeyy vdesagyiev gvwrsgtdls kaasvtvrsr
     2041 ksepvtaeag vdyvgisrnl dfspgvnmqt frviilddlg qpvlegtekf elvlrmpmna
     2101 algepsktti findsvsdlp kmqfkesvyv anendgqvsa miyrsgdiry tstvrcytrq
     2161 gsaqvmmdfe erpntdssii tflpgetekp ctlvltddtf heeeeelrlv lgtprsdssf
     2221 gasigeqnet likirddadk aiikfgetkf svsepkdtrq vaivkipvlr lgdtskvsvv
     2281 rvhtkdgsat sgedyhpise eiefkegetq hfveievlfd gvremreaft vhlkpdenmv
     2341 aeiqvtkaiv yieemnsmad vtfpsvpqva slliyddtsk akdrsspiag ypvicitacn
     2401 pkyedfdktg sicasesinn tltryrwlvs aptgpdgvts pmkevdfdtf ftsskmitld
     2461 siyfqagsrv qcaaravnsd gneglelmsp ivtistsegl cqprisgvvg aepfsaklry
     2521 tgpedpdyan likltvtmph idgmlpvist relsnfeltl spdgtrvgnh kcsnlldyte
     2581 vkthhgfltd atknpdvige tipyqyspti rgfntlrfyr nlnleaclwe fisyydmsel
     2641 ltdcggtigt dgqvlnlvqs yvtlrvplyv syvfhspvgv ggwqhfdlqs elrltfvydt
     2701 ailwkdgvgs ppeaelqgsl fptsmrisee grlvvnfkte arfhglfvms hpassltsmv
     2761 msadhpgltf slslirsept ynlpvqqwsf lsdfavrdys gtytvkliac ttaphqeysl
     2821 pvicnprepi tfdldirfqq vsdpvaaefs lntqmfllsk ktlwlsdgsm gfgqesdvaf
     2881 segdiiygrv mvdpvqnlgd sfycsiekvf lctgadgyvp kynpsnteyg cladspslly
     2941 rfkivdkaqp etqatsfgnv lfnaklaidd peaiplvkqp gsdgfkvdst plfqvslgre
     3001 wyvhtiytvr skenanrgig krsvehqyhs llsagspgas aqrrqkrgve qapelardig
     3061 vesnrgtniq hialdrtskk qvpqrevaln gvlprelnnq sagtslvtii ggaaaiflai
     3121 cliaiiilll kwkrnsdkke stnesgsnep mmlpnnyshd ssev
//
LOCUS       XP_041322928             999 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-8 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322928
VERSION     XP_041322928.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466994.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..999
                     /product="protocadherin-8 isoform X1"
                     /calculated_mol_wt=108178
     Region          20..99
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          132..230
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(136..137,193,195,226,228..229)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          238..338
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(245..246,301,303,334,336..337)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          356..451
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(361..362,414,416,447,449..450)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          460..561
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(466..467,524,526,557,559..560)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          583..666
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..999
                     /gene="PCDH8"
                     /coded_by="XM_041466994.1:67..3066"
                     /db_xref="GeneID:121353281"
ORIGIN      
        1 msplrllaaa cllalsrckt vryrtdeega pgtvigtlad empvkapgem sfrlmrqfsn
       61 sslvrvreed gqlsigeagl drerlcgqap qcvlafdvvs cwreryrlvh velevrdind
      121 naprfphaqm alevsesaap gtrlplevav dedvgsnsiq sfqvslnshf gveaqtradg
      181 arcadlvllq eldrerqpsy tlelvakdgg sparsgtatv hvrvldandn spafaqssvt
      241 velpedappg sllldldaad pdegpngevv yafssqvppe arrlfrldpr sghltleaav
      301 dyertrtyel dvraqdrgas praatctvvv rltdvndnap risisalrga asaagvayvs
      361 eaaatesfva lvsatdrdsg angqvrcslr ghdhfalqra yedsymivtt aaldreripe
      421 ynltvvaedl gsppfktvrq ytvrvsdend naplfakply evavpennpp gayittvvar
      481 dpdlghngkv tyrlletqvm gapistyvsv dpatgaiyal rtfnyeilkq ldlriqatdg
      541 gspqlssstv vkvrmvdqnd nppviihpvl tngtveigvs sktsrdslva qikardaddg
      601 anaeltfafl eesqqdlfti nsgtgdivlr gdlseelgql fkviltvtdn grpplattat
      661 vnflvtatap ssiqdiaakp sswegkalqw dipliviivl agsctlllva iitiattcnr
      721 rkkgnniknk talkdqidis hlekghqeeg sqrgnmfevr tfpsktsfts pdpspaaeev
      781 sttesgsdst clyegqkrlr gqsgeqgfaa tpsynkepap pvaiwkghsf ntisgreaek
      841 fsgkdsgkgd sdfndsdsdi sgdalkkdli thmqnglwac taeckilghs drcwspscgr
      901 anphpspyps aplstfckst slprdplrrd nfyqaqlpkt vglqsvyekv lhrdfdrtit
      961 llspprparl pdlqeigvpl fpapstrylg pqtetteka
//
LOCUS       XP_041322929             998 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-8 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322929
VERSION     XP_041322929.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466995.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..998
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..998
                     /product="protocadherin-8 isoform X2"
                     /calculated_mol_wt=108050
     Region          20..99
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          132..230
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(136..137,193,195,226,228..229)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          238..338
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(245..246,301,303,334,336..337)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          356..451
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(361..362,414,416,447,449..450)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          460..561
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(466..467,524,526,557,559..560)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          583..666
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..998
                     /gene="PCDH8"
                     /coded_by="XM_041466995.1:67..3063"
                     /db_xref="GeneID:121353281"
ORIGIN      
        1 msplrllaaa cllalsrckt vryrtdeega pgtvigtlad empvkapgem sfrlmrqfsn
       61 sslvrvreed gqlsigeagl drerlcgqap qcvlafdvvs cwreryrlvh velevrdind
      121 naprfphaqm alevsesaap gtrlplevav dedvgsnsiq sfqvslnshf gveaqtradg
      181 arcadlvllq eldrerqpsy tlelvakdgg sparsgtatv hvrvldandn spafaqssvt
      241 velpedappg sllldldaad pdegpngevv yafssqvppe arrlfrldpr sghltleaav
      301 dyertrtyel dvraqdrgas praatctvvv rltdvndnap risisalrga asaagvayvs
      361 eaaatesfva lvsatdrdsg angqvrcslr ghdhfalqra yedsymivtt aaldreripe
      421 ynltvvaedl gsppfktvrq ytvrvsdend naplfakply evavpennpp gayittvvar
      481 dpdlghngkv tyrlletqvm gapistyvsv dpatgaiyal rtfnyeilkq ldlriqatdg
      541 gspqlssstv vkvrmvdqnd nppviihpvl tngtveigvs sktsrdslva qikardaddg
      601 anaeltfafl eesqqdlfti nsgtgdivlr gdlseelgql fkviltvtdn grpplattat
      661 vnflvtatap ssiqdiaakp sswegkalqw dipliviivl agsctlllva iitiattcnr
      721 rkkgnniknk talkdqidis hlekghqeeg sqrgnmfevr tfpsktsfts pdpspaaeev
      781 sttesgsdst clyegqkrlr gqsgegfaat psynkepapp vaiwkghsfn tisgreaekf
      841 sgkdsgkgds dfndsdsdis gdalkkdlit hmqnglwact aeckilghsd rcwspscgra
      901 nphpspypsa plstfcksts lprdplrrdn fyqaqlpktv glqsvyekvl hrdfdrtitl
      961 lspprparlp dlqeigvplf papstrylgp qtetteka
//
LOCUS       XP_041322930             952 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-8 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322930
VERSION     XP_041322930.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466996.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..952
                     /product="protocadherin-8 isoform X3"
                     /calculated_mol_wt=103186
     Region          20..99
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          132..230
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(136..137,193,195,226,228..229)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          238..338
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(245..246,301,303,334,336..337)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          356..451
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(361..362,414,416,447,449..450)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          460..561
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(466..467,524,526,557,559..560)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          579..666
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..952
                     /gene="PCDH8"
                     /coded_by="XM_041466996.1:67..2925"
                     /db_xref="GeneID:121353281"
ORIGIN      
        1 msplrllaaa cllalsrckt vryrtdeega pgtvigtlad empvkapgem sfrlmrqfsn
       61 sslvrvreed gqlsigeagl drerlcgqap qcvlafdvvs cwreryrlvh velevrdind
      121 naprfphaqm alevsesaap gtrlplevav dedvgsnsiq sfqvslnshf gveaqtradg
      181 arcadlvllq eldrerqpsy tlelvakdgg sparsgtatv hvrvldandn spafaqssvt
      241 velpedappg sllldldaad pdegpngevv yafssqvppe arrlfrldpr sghltleaav
      301 dyertrtyel dvraqdrgas praatctvvv rltdvndnap risisalrga asaagvayvs
      361 eaaatesfva lvsatdrdsg angqvrcslr ghdhfalqra yedsymivtt aaldreripe
      421 ynltvvaedl gsppfktvrq ytvrvsdend naplfakply evavpennpp gayittvvar
      481 dpdlghngkv tyrlletqvm gapistyvsv dpatgaiyal rtfnyeilkq ldlriqatdg
      541 gspqlssstv vkvrmvdqnd nppviihpvl tngtveigvs sktsrdslva qikardaddg
      601 anaeltfafl eesqqdlfti nsgtgdivlr gdlseelgql fkviltvtdn grpplattat
      661 vnflvtatap ssiqdiaakp sswegkalqw dipliviivl agsctlllva iitiattcnr
      721 rkkgnniknk talkdqidis hlekghqeeg sqrgnmfeqg faatpsynke pappvaiwkg
      781 hsfntisgre aekfsgkdsg kgdsdfndsd sdisgdalkk dlithmqngl wactaeckil
      841 ghsdrcwsps cgranphpsp ypsaplstfc kstslprdpl rrdnfyqaql pktvglqsvy
      901 ekvlhrdfdr titllspprp arlpdlqeig vplfpapstr ylgpqtette ka
//
LOCUS       XP_041322931             649 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein O1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322931
VERSION     XP_041322931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466997.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..649
                     /product="forkhead box protein O1"
                     /calculated_mol_wt=69017
     Region          143..241
                     /region_name="FH_FOXO1"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     O1 (FOXO1); cd20060"
                     /db_xref="CDD:410834"
     Site            order(149..150,152,156..157,175..176,179,203..204,
                     206..207,210,217,224,226..227,229)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410834"
     Region          415..488
                     /region_name="FOXO_KIX_bdg"
                     /note="KIX-binding domain of forkhead box O, CR2;
                     pfam16675"
                     /db_xref="CDD:465228"
     Region          591..628
                     /region_name="FOXO-TAD"
                     /note="Transactivation domain of FOXO protein family;
                     pfam16676"
                     /db_xref="CDD:435506"
     CDS             1..649
                     /gene="FOXO1"
                     /coded_by="XM_041466997.1:11..1960"
                     /db_xref="GeneID:121353283"
ORIGIN      
        1 maeapqlvdi dpdfeplprp rsctwplprp efnppssats spapscggqp dgaagaaaga
       61 gaaasgalsa dfisnlslle esedfaplpp aaappeaaac rcgdfpapea gcrlhppgpp
      121 pvppvpppva glspgpvpgq prkssssrrn awgnlsyadl itkaiesspe krltlsqiye
      181 wmvksvpyfk dkgdsnssag wknsirhnls lhskfirvqn egtgksswwm lnpeggksgk
      241 sprrraasmd nnskfaksrg raakkkaalq sgqegngdsp gsqfskwpas psshsnddfd
      301 nwstfrprts snastisgrl spilpeqddl gdgdvhsmvy pssttkmtst lpslsemsns
      361 enmenlldnl nllspntsmt vstqsssatl mqqtpgysfa ssttsigspn pdyrkftyaq
      421 asmsslsqip mqtlqdskss ygsmsqyncp agllkellts dspphndila svdagvsqag
      481 gralgqsvlm vansvvpnyg sqpphnkmmn pnarphqghn qpapavngra lshtvntmsh
      541 tsglnrlstv ktslqvpmsh pmqmnamnpy apvnscngyg rvgivslhqe klpsdlddml
      601 ierldcdmes iirndlmdge tldfnfdsvl pnqsfqhsvk ttthswvsg
//
LOCUS       XP_041322932             288 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S31, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041322932
VERSION     XP_041322932.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466998.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="28S ribosomal protein S31, mitochondrial"
                     /calculated_mol_wt=32928
     Region          1..286
                     /region_name="MRP-S31"
                     /note="Mitochondrial 28S ribosomal protein S31; pfam15433"
                     /db_xref="CDD:464714"
     CDS             1..288
                     /gene="MRPS31"
                     /coded_by="XM_041466998.1:257..1123"
                     /db_xref="GeneID:121353284"
ORIGIN      
        1 mkvevsyrkk lqqlkasekq amkkleglds egsvpqgite daqrgkplnp elvkaasava
       61 sslprdkkqt esellaqlrr heettdkqkk ggtvnirnvi semavkrqsr dqwgvrlsgr
      121 islqldedgr rirperssaq smdsrrslkv gkrlniftka stepehalkt vpsptiwdle
      181 fakevaavta qpprngfeem iqwtkegilw efpidneagm eddaefhehi flekhlegfp
      241 kegpirhfme lvicglsknp ylsvkqkveh iewfqkyfee kkellqei
//
LOCUS       XP_041322933             288 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S31, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041322933
VERSION     XP_041322933.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041466999.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="28S ribosomal protein S31, mitochondrial"
                     /calculated_mol_wt=32928
     Region          1..286
                     /region_name="MRP-S31"
                     /note="Mitochondrial 28S ribosomal protein S31; pfam15433"
                     /db_xref="CDD:464714"
     CDS             1..288
                     /gene="MRPS31"
                     /coded_by="XM_041466999.1:199..1065"
                     /db_xref="GeneID:121353284"
ORIGIN      
        1 mkvevsyrkk lqqlkasekq amkkleglds egsvpqgite daqrgkplnp elvkaasava
       61 sslprdkkqt esellaqlrr heettdkqkk ggtvnirnvi semavkrqsr dqwgvrlsgr
      121 islqldedgr rirperssaq smdsrrslkv gkrlniftka stepehalkt vpsptiwdle
      181 fakevaavta qpprngfeem iqwtkegilw efpidneagm eddaefhehi flekhlegfp
      241 kegpirhfme lvicglsknp ylsvkqkveh iewfqkyfee kkellqei
//
LOCUS       XP_041322934             718 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322934
VERSION     XP_041322934.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467000.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..718
                     /product="histone-lysine N-methyltransferase SETDB2
                     isoform X1"
                     /calculated_mol_wt=80365
     Region          174..234
                     /region_name="HMT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative histone methyltransferases (HMT) such as CLLD8
                     and SETDB1 proteins; CLLD8 contains a MBD, a PreSET and a
                     bifurcated SET domain, suggesting that CLLD8 might be
                     associated with methylation-mediated...; cd01395"
                     /db_xref="CDD:238689"
     Site            order(186,188,190,196,198,207,210,214)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          232..716
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(389..390,646..651,659..661,690..693)
                     /site_type="active"
                     /db_xref="CDD:380921"
     Site            order(389..390,647..651,692)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380921"
     CDS             1..718
                     /gene="SETDB2"
                     /coded_by="XM_041467000.1:316..2472"
                     /db_xref="GeneID:121353285"
ORIGIN      
        1 meeksmlcdf feeenltssr eestegdvkt fwtqlggrrv dvifeqlqnv lsllkekikn
       61 gtatnqecwq awalvneanl gdlltlanvs delngdgaqe tkpnlqpllp ddnavetvea
      121 sdsekedter tcsgckesss kiqglplnvq yqnhkcssac lanravgsyk genplkipil
      181 fnfqrrhaka dclskpldvn ykapcgrslr sfrdvrnylf etecnflfvd hfsfntyvll
      241 grntmnpepl vfefdisdga esvpisfcnt ldharlpyfk yrksswprgy ylnnlsslfv
      301 dscdctdgci drskcaclql targcskisl spsikrsrgy rykrlegpvp sgiyecsvlc
      361 rcdklmcqnr vvqhgiqvrl qvfntekkgw gvrclddidk gtfvctysgr lmsraevlgd
      421 aeeelkekna vndrdhdfss kkrklgldrs dsvielvqtd kndilenqes lsqtvdnenk
      481 stlvhlknss naavrrpgtr tlvfrnhqlk mvhsassded gssqihqssk tkltsgtkkg
      541 kekstqqqke ehlmemgqtd sagvesagck slslqgvdcg kysvlsdtcv vrpssnaplk
      601 adckensrqp kqdalceese gdgvlpkntn eeniyvldat kegnvgrfln hsccpnlfaq
      661 svfvethnrs fpwvafftnr hvkagteltw dygyeagsmp eteischcgv qkcrkktl
//
LOCUS       XP_041322936             698 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322936
VERSION     XP_041322936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..698
                     /product="histone-lysine N-methyltransferase SETDB2
                     isoform X2"
                     /calculated_mol_wt=78016
     Region          154..214
                     /region_name="HMT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative histone methyltransferases (HMT) such as CLLD8
                     and SETDB1 proteins; CLLD8 contains a MBD, a PreSET and a
                     bifurcated SET domain, suggesting that CLLD8 might be
                     associated with methylation-mediated...; cd01395"
                     /db_xref="CDD:238689"
     Site            order(166,168,170,176,178,187,190,194)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          212..696
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(369..370,626..631,639..641,670..673)
                     /site_type="active"
                     /db_xref="CDD:380921"
     Site            order(369..370,627..631,672)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380921"
     CDS             1..698
                     /gene="SETDB2"
                     /coded_by="XM_041467002.1:316..2412"
                     /db_xref="GeneID:121353285"
ORIGIN      
        1 meekssdvkt fwtqlggrrv dvifeqlqnv lsllkekikn gtatnqecwq awalvneanl
       61 gdlltlanvs delngdgaqe tkpnlqpllp ddnavetvea sdsekedter tcsgckesss
      121 kiqglplnvq yqnhkcssac lanravgsyk genplkipil fnfqrrhaka dclskpldvn
      181 ykapcgrslr sfrdvrnylf etecnflfvd hfsfntyvll grntmnpepl vfefdisdga
      241 esvpisfcnt ldharlpyfk yrksswprgy ylnnlsslfv dscdctdgci drskcaclql
      301 targcskisl spsikrsrgy rykrlegpvp sgiyecsvlc rcdklmcqnr vvqhgiqvrl
      361 qvfntekkgw gvrclddidk gtfvctysgr lmsraevlgd aeeelkekna vndrdhdfss
      421 kkrklgldrs dsvielvqtd kndilenqes lsqtvdnenk stlvhlknss naavrrpgtr
      481 tlvfrnhqlk mvhsassded gssqihqssk tkltsgtkkg kekstqqqke ehlmemgqtd
      541 sagvesagck slslqgvdcg kysvlsdtcv vrpssnaplk adckensrqp kqdalceese
      601 gdgvlpkntn eeniyvldat kegnvgrfln hsccpnlfaq svfvethnrs fpwvafftnr
      661 hvkagteltw dygyeagsmp eteischcgv qkcrkktl
//
LOCUS       XP_041322937             692 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322937
VERSION     XP_041322937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467003.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..692
                     /product="histone-lysine N-methyltransferase SETDB2
                     isoform X3"
                     /calculated_mol_wt=77410
     Region          174..234
                     /region_name="HMT_MBD"
                     /note="Methyl-CpG binding domains (MBD) present in
                     putative histone methyltransferases (HMT) such as CLLD8
                     and SETDB1 proteins; CLLD8 contains a MBD, a PreSET and a
                     bifurcated SET domain, suggesting that CLLD8 might be
                     associated with methylation-mediated...; cd01395"
                     /db_xref="CDD:238689"
     Site            order(186,188,190,196,198,207,210,214)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          232..>445
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     CDS             1..692
                     /gene="SETDB2"
                     /coded_by="XM_041467003.1:316..2394"
                     /db_xref="GeneID:121353285"
ORIGIN      
        1 meeksmlcdf feeenltssr eestegdvkt fwtqlggrrv dvifeqlqnv lsllkekikn
       61 gtatnqecwq awalvneanl gdlltlanvs delngdgaqe tkpnlqpllp ddnavetvea
      121 sdsekedter tcsgckesss kiqglplnvq yqnhkcssac lanravgsyk genplkipil
      181 fnfqrrhaka dclskpldvn ykapcgrslr sfrdvrnylf etecnflfvd hfsfntyvll
      241 grntmnpepl vfefdisdga esvpisfcnt ldharlpyfk yrksswprgy ylnnlsslfv
      301 dscdctdgci drskcaclql targcskisl spsikrsrgy rykrlegpvp sgiyecsvlc
      361 rcdklmcqnr vvqhgiqvrl qvfntekkgw gvrclddidk gtfvctysgr lmsraevlgd
      421 aeeelkekna vndrdhdfss kkrklgldrs dsvielvqtd kndilenqes lsqtvdnenk
      481 stlvhlknss naavrrpgtr tlvfrnhqlk mvhsassded gssqihqssk tkltsgtkkg
      541 kekstqqqke ehlmemgqtd sagvesagck slslqgvdcg kysvlsdtcv vrpssnaplk
      601 adckensrqp kqdalceese gdgvlpkntn eeniyvldat kegnvgrfln llpkslctkc
      661 vcrnsqqkfs lggilhkqtc eswnrthlgl wl
//
LOCUS       XP_041322938             537 aa            linear   VRT 06-MAY-2021
DEFINITION  RCC1 and BTB domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322938
VERSION     XP_041322938.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467004.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="RCC1 and BTB domain-containing protein 1"
                     /calculated_mol_wt=58851
     Region          19..317
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          356..472
                     /region_name="BTB_POZ_RCBTB1_CLLD7"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in RCC1 and BTB
                     domain-containing protein 1 (RCBTB1); cd18353"
                     /db_xref="CDD:349662"
     Region          472..537
                     /region_name="BACK_RCBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     RCC1 and BTB domain-containing protein 1 (RCBTB1);
                     cd18528"
                     /db_xref="CDD:350603"
     CDS             1..537
                     /gene="RCBTB1"
                     /coded_by="XM_041467004.1:241..1854"
                     /db_xref="GeneID:121353286"
ORIGIN      
        1 mthssimvdv gkwpiftlls pqeiasirka cvfgtsanea iyithndevf vfglncsncl
       61 gtgdnqstiv pkklealcgk kisslsygsg phvvlctedg evyawghngy sqlgngttnq
      121 gitpvqvctn llikkvveva cgshhsmals ldgdlyawgy nncgqvgsgs tanqptprrv
      181 snclqgkivv giacgqtssm avvnngevyg wgyngngqlg lgnngnqltp crvaalhsvc
      241 vlqiacgyah tlaltdegll yawgantygq lgtgnksnql spvqimmeke rvveiaachs
      301 ahtsaaktqs gqvymwgqcr gqsvtfphlt hfactddvfa cfatpavmwr llsvehedfl
      361 tvaeslkkef dspetsdlkf rvdgkyihvh kavlkirceh frtmfqsywn edmkevieid
      421 qfsypvyraf leylytdsvd lppedaigll dlatsycenr lkklcqhiik rgitvenafs
      481 llsaavryda edleefcfkf cvnhltevtq ttafwqmdgp llkefiakas kcgafkn
//
LOCUS       XP_041322939             537 aa            linear   VRT 06-MAY-2021
DEFINITION  RCC1 and BTB domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322939
VERSION     XP_041322939.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467005.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="RCC1 and BTB domain-containing protein 1"
                     /calculated_mol_wt=58851
     Region          19..317
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          356..472
                     /region_name="BTB_POZ_RCBTB1_CLLD7"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in RCC1 and BTB
                     domain-containing protein 1 (RCBTB1); cd18353"
                     /db_xref="CDD:349662"
     Region          472..537
                     /region_name="BACK_RCBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     RCC1 and BTB domain-containing protein 1 (RCBTB1);
                     cd18528"
                     /db_xref="CDD:350603"
     CDS             1..537
                     /gene="RCBTB1"
                     /coded_by="XM_041467005.1:312..1925"
                     /db_xref="GeneID:121353286"
ORIGIN      
        1 mthssimvdv gkwpiftlls pqeiasirka cvfgtsanea iyithndevf vfglncsncl
       61 gtgdnqstiv pkklealcgk kisslsygsg phvvlctedg evyawghngy sqlgngttnq
      121 gitpvqvctn llikkvveva cgshhsmals ldgdlyawgy nncgqvgsgs tanqptprrv
      181 snclqgkivv giacgqtssm avvnngevyg wgyngngqlg lgnngnqltp crvaalhsvc
      241 vlqiacgyah tlaltdegll yawgantygq lgtgnksnql spvqimmeke rvveiaachs
      301 ahtsaaktqs gqvymwgqcr gqsvtfphlt hfactddvfa cfatpavmwr llsvehedfl
      361 tvaeslkkef dspetsdlkf rvdgkyihvh kavlkirceh frtmfqsywn edmkevieid
      421 qfsypvyraf leylytdsvd lppedaigll dlatsycenr lkklcqhiik rgitvenafs
      481 llsaavryda edleefcfkf cvnhltevtq ttafwqmdgp llkefiakas kcgafkn
//
LOCUS       XP_041322940             537 aa            linear   VRT 06-MAY-2021
DEFINITION  RCC1 and BTB domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322940
VERSION     XP_041322940.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467006.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="RCC1 and BTB domain-containing protein 1"
                     /calculated_mol_wt=58851
     Region          19..317
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          356..472
                     /region_name="BTB_POZ_RCBTB1_CLLD7"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in RCC1 and BTB
                     domain-containing protein 1 (RCBTB1); cd18353"
                     /db_xref="CDD:349662"
     Region          472..537
                     /region_name="BACK_RCBTB1"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     RCC1 and BTB domain-containing protein 1 (RCBTB1);
                     cd18528"
                     /db_xref="CDD:350603"
     CDS             1..537
                     /gene="RCBTB1"
                     /coded_by="XM_041467006.1:64..1677"
                     /db_xref="GeneID:121353286"
ORIGIN      
        1 mthssimvdv gkwpiftlls pqeiasirka cvfgtsanea iyithndevf vfglncsncl
       61 gtgdnqstiv pkklealcgk kisslsygsg phvvlctedg evyawghngy sqlgngttnq
      121 gitpvqvctn llikkvveva cgshhsmals ldgdlyawgy nncgqvgsgs tanqptprrv
      181 snclqgkivv giacgqtssm avvnngevyg wgyngngqlg lgnngnqltp crvaalhsvc
      241 vlqiacgyah tlaltdegll yawgantygq lgtgnksnql spvqimmeke rvveiaachs
      301 ahtsaaktqs gqvymwgqcr gqsvtfphlt hfactddvfa cfatpavmwr llsvehedfl
      361 tvaeslkkef dspetsdlkf rvdgkyihvh kavlkirceh frtmfqsywn edmkevieid
      421 qfsypvyraf leylytdsvd lppedaigll dlatsycenr lkklcqhiik rgitvenafs
      481 llsaavryda edleefcfkf cvnhltevtq ttafwqmdgp llkefiakas kcgafkn
//
LOCUS       XP_041322941             306 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 11 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322941
VERSION     XP_041322941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467007.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="PHD finger protein 11 isoform X1"
                     /calculated_mol_wt=34672
     Region          9..117
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(73,83..86,92)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..306
                     /gene="PHF11"
                     /coded_by="XM_041467007.1:266..1186"
                     /db_xref="GeneID:121353287"
ORIGIN      
        1 makmvrttca fcsegeagsv myiaternia ahqdcllfss gfvesedhnp enleirfdvs
       61 svlkelrrgk rlvcnfcrkk gatvgceera crrsyhffca lcddaavetd evngiyrphi
      121 psilfgvmss syqdpcipls slqafastas ykltatkkkr rrtlasptit eemsteetae
      181 enslrilkrk nnrhkvridf vrkckqagll ddifeemldt lhlaqeklmd dntseteyee
      241 tvmalfdcgl feniltniys gteekiqkll enrkrldhki evlqdlkefi lptpenmast
      301 sstvse
//
LOCUS       XP_041322942             306 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 11 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322942
VERSION     XP_041322942.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467008.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="PHD finger protein 11 isoform X1"
                     /calculated_mol_wt=34672
     Region          9..117
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(73,83..86,92)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..306
                     /gene="PHF11"
                     /coded_by="XM_041467008.1:3574..4494"
                     /db_xref="GeneID:121353287"
ORIGIN      
        1 makmvrttca fcsegeagsv myiaternia ahqdcllfss gfvesedhnp enleirfdvs
       61 svlkelrrgk rlvcnfcrkk gatvgceera crrsyhffca lcddaavetd evngiyrphi
      121 psilfgvmss syqdpcipls slqafastas ykltatkkkr rrtlasptit eemsteetae
      181 enslrilkrk nnrhkvridf vrkckqagll ddifeemldt lhlaqeklmd dntseteyee
      241 tvmalfdcgl feniltniys gteekiqkll enrkrldhki evlqdlkefi lptpenmast
      301 sstvse
//
LOCUS       XP_041322943             306 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 11 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322943
VERSION     XP_041322943.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467009.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="PHD finger protein 11 isoform X1"
                     /calculated_mol_wt=34672
     Region          9..117
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(73,83..86,92)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..306
                     /gene="PHF11"
                     /coded_by="XM_041467009.1:590..1510"
                     /db_xref="GeneID:121353287"
ORIGIN      
        1 makmvrttca fcsegeagsv myiaternia ahqdcllfss gfvesedhnp enleirfdvs
       61 svlkelrrgk rlvcnfcrkk gatvgceera crrsyhffca lcddaavetd evngiyrphi
      121 psilfgvmss syqdpcipls slqafastas ykltatkkkr rrtlasptit eemsteetae
      181 enslrilkrk nnrhkvridf vrkckqagll ddifeemldt lhlaqeklmd dntseteyee
      241 tvmalfdcgl feniltniys gteekiqkll enrkrldhki evlqdlkefi lptpenmast
      301 sstvse
//
LOCUS       XP_041322944             285 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 11 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322944
VERSION     XP_041322944.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467010.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..285
                     /product="PHD finger protein 11 isoform X2"
                     /calculated_mol_wt=32569
     Region          9..123
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(73,83..86,92,118)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..285
                     /gene="PHF11"
                     /coded_by="XM_041467010.1:266..1123"
                     /db_xref="GeneID:121353287"
ORIGIN      
        1 makmvrttca fcsegeagsv myiaternia ahqdcllfss gfvesedhnp enleirfdvs
       61 svlkelrrgk rlvcnfcrkk gatvgceera crrsyhffca lcddaavetd evngiyrvfc
      121 pkhdpgnrtn hyaatkkkrr rtlasptite emsteetaee nslrilkrkn nrhkvridfv
      181 rkckqaglld difeemldtl hlaqeklmdd ntseteyeet vmalfdcglf eniltniysg
      241 teekiqklle nrkrldhkie vlqdlkefil ptpenmasts stvse
//
LOCUS       XP_041322945             282 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 11 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322945
VERSION     XP_041322945.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467011.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="PHD finger protein 11 isoform X3"
                     /calculated_mol_wt=31874
     Region          9..117
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(73,83..86,92)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..282
                     /gene="PHF11"
                     /coded_by="XM_041467011.1:266..1114"
                     /db_xref="GeneID:121353287"
ORIGIN      
        1 makmvrttca fcsegeagsv myiaternia ahqdcllfss gfvesedhnp enleirfdvs
       61 svlkelrrgk rlvcnfcrkk gatvgceera crrsyhffca lcddaavetd evngiyrphi
      121 psilfgvmss syqdpcipls slqafastas ykltatkkkr rrtlasptit eemsteetae
      181 enslrilkrk nnrhkvridf vrkckqagll ddifeemldt lhlaqeklmd dntsetgtee
      241 kiqkllenrk rldhkievlq dlkefilptp enmastsstv se
//
LOCUS       XP_041322946             270 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 11 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322946
VERSION     XP_041322946.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467012.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="PHD finger protein 11 isoform X4"
                     /calculated_mol_wt=30485
     Region          9..81
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(37,47..50,56)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..270
                     /gene="PHF11"
                     /coded_by="XM_041467012.1:266..1078"
                     /db_xref="GeneID:121353287"
ORIGIN      
        1 makmvrttca fcsegeagsv myiaternia ahqdclvcnf crkkgatvgc eeracrrsyh
       61 ffcalcddaa vetdevngiy rphipsilfg vmsssyqdpc iplsslqafa stasykltat
      121 kkkrrrtlas ptiteemste etaeenslri lkrknnrhkv ridfvrkckq agllddifee
      181 mldtlhlaqe klmddntset eyeetvmalf dcglfenilt niysgteeki qkllenrkrl
      241 dhkievlqdl kefilptpen mastsstvse
//
LOCUS       XP_041322947             649 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 6 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322947
VERSION     XP_041322947.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467013.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..649
                     /product="conserved oligomeric Golgi complex subunit 6
                     isoform X1"
                     /calculated_mol_wt=72625
     Region          48..644
                     /region_name="COG6"
                     /note="Conserved oligomeric complex COG6; pfam06419"
                     /db_xref="CDD:461904"
     CDS             1..649
                     /gene="COG6"
                     /coded_by="XM_041467013.1:19..1968"
                     /db_xref="GeneID:121353289"
ORIGIN      
        1 madtaapppp paapapglpa apgtnplsrk lnkiletrld ndkemlealk alstffvens
       61 lrsrrnlrgd ierrslaine efvhifkqvk eelesinedv qamssccedm ssrlkaakeq
      121 tqdlivkttk lqaenqrlem kaqvadafia kfqltpdemn llrgtkdepi tedffkalgr
      181 vkqihddvki llrtnqqrag leimeqmall qetsyerlyr wtqnecrtlt qescdispvl
      241 aqamealqdr pvlykytlde fgtarrsavv rgfidaltrg glggtprpie mhshdplryv
      301 gdmlawlhqa tasekehlea mlklvtiqgv eeniqevvgh itegvcrplk vrieqvivae
      361 pgavllykis nllkfyhhti sgivgnsaat llttieemhl lskkiffnsl slhasklmdk
      421 velpppdlgp ssalnqtlnl lrevlashds svipldarqa dfvqvlscvl dpllqmctms
      481 asnlgtadma tymvnslymm rttlalfeft dkrlemlqfq ieahldtlin eqasyvltra
      541 glsyiynalq qhkpeqgpls nlssmdsval kvamaqfdry lsapdsllms qlnfllsatv
      601 keqiikqste lvcraysely aavmdpsney kdpetilhrs phqvqalls
//
LOCUS       XP_041322948             579 aa            linear   VRT 06-MAY-2021
DEFINITION  conserved oligomeric Golgi complex subunit 6 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322948
VERSION     XP_041322948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..579
                     /product="conserved oligomeric Golgi complex subunit 6
                     isoform X2"
                     /calculated_mol_wt=64849
     Region          48..574
                     /region_name="COG6"
                     /note="Conserved oligomeric complex COG6; pfam06419"
                     /db_xref="CDD:461904"
     CDS             1..579
                     /gene="COG6"
                     /coded_by="XM_041467014.1:19..1758"
                     /db_xref="GeneID:121353289"
ORIGIN      
        1 madtaapppp paapapglpa apgtnplsrk lnkiletrld ndkemlealk alstffvens
       61 lrsrrnlrgd ierrslaine efvhifkqvk eelesinedv qamssccedm ssrlkaakeq
      121 tqdlivkttk lqaenqrlem kaqvadafia kfqltpdemn llrgtkdepi tedffkalgr
      181 vkqihddvki llrtnqqrag leimeqmall qetsyerlyr wtqnecrtlt qescdispvl
      241 aqamealqdr pvlykytlde fgtarrsavv rgfidaltrg glggtprpie mhshdplryv
      301 gdmlawlhqa tasekehlea mlklvtiqgv eeniqevvgh itegvcrplk velpppdlgp
      361 ssalnqtlnl lrevlashds svipldarqa dfvqvlscvl dpllqmctms asnlgtadma
      421 tymvnslymm rttlalfeft dkrlemlqfq ieahldtlin eqasyvltra glsyiynalq
      481 qhkpeqgpls nlssmdsval kvamaqfdry lsapdsllms qlnfllsatv keqiikqste
      541 lvcraysely aavmdpsney kdpetilhrs phqvqalls
//
LOCUS       XP_041322950             831 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322950
VERSION     XP_041322950.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467016.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..831
                     /product="periostin isoform X1"
                     /calculated_mol_wt=93105
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..831
                     /gene="POSTN"
                     /coded_by="XM_041467016.1:71..2566"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy kiniiesnvq piitkedpsi tqltkliege pefkivrege titkvihgep
      721 iiktytkiid grpvevtekk vteeriiqgp eikytritag gsdneeklkk ileeevtkvt
      781 kfiegdghll edeeikrllq gagteytkvt kviegepqii ereikkvhle g
//
LOCUS       XP_041322951             828 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322951
VERSION     XP_041322951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..828
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..828
                     /product="periostin isoform X2"
                     /calculated_mol_wt=92737
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..828
                     /gene="POSTN"
                     /coded_by="XM_041467017.1:53..2539"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy kiniiesnvq piitkedpsi tqltkliege pefkivrege titkvihgep
      721 iiktytkiid grpvevtekk vteeriiqgp eikytritag gsdneeklkk ileeevtkvt
      781 kfiegdghll edeeikrllq geapvrkaqp trraqgggar rrtrldhs
//
LOCUS       XP_041322952             815 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322952
VERSION     XP_041322952.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467018.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="periostin isoform X3"
                     /calculated_mol_wt=91283
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..815
                     /gene="POSTN"
                     /coded_by="XM_041467018.1:72..2519"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy npsitqltkl iegepefkiv regetitkvi hgepiiktyt kiidgrpvev
      721 tekkvteeri iqgpeikytr itaggsdnee klkkileeev tkvtkfiegd ghlledeeik
      781 rllqgagtey tkvtkviege pqiiereikk vhleg
//
LOCUS       XP_041322953             801 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322953
VERSION     XP_041322953.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467019.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..801
                     /product="periostin isoform X4"
                     /calculated_mol_wt=89658
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..801
                     /gene="POSTN"
                     /coded_by="XM_041467019.1:53..2458"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy kiniiesnvq piitkedpsi tqltkliege pefkivrege titkvihgep
      721 iiktytkiid grpvevtekk vteeriiqgp eikytritag gsdneeklkk ileeeapvrk
      781 aqptrraqgg garrrtrldh s
//
LOCUS       XP_041322954             799 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322954
VERSION     XP_041322954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467020.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..799
                     /product="periostin isoform X5"
                     /calculated_mol_wt=89544
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..799
                     /gene="POSTN"
                     /coded_by="XM_041467020.1:73..2472"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy kiniiesnvq piitkeepii ktytkiidgr pvevtekkvt eeriiqgpei
      721 kytritaggs dneeklkkil eeevtkvtkf iegdghlled eeikrllqga gteytkvtkv
      781 iegepqiier eikkvhleg
//
LOCUS       XP_041322955             783 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041322955
VERSION     XP_041322955.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467021.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..783
                     /product="periostin isoform X6"
                     /calculated_mol_wt=87722
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..783
                     /gene="POSTN"
                     /coded_by="XM_041467021.1:71..2422"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy kpiiktytki idgrpvevte kkvteeriiq gpeikytrit aggsdneekl
      721 kkileeevtk vtkfiegdgh lledeeikrl lqgagteytk vtkviegepq iiereikkvh
      781 leg
//
LOCUS       XP_041322956             857 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041322956
VERSION     XP_041322956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..857
                     /product="periostin isoform X7"
                     /calculated_mol_wt=96058
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..857
                     /gene="POSTN"
                     /coded_by="XM_041467022.1:71..2644"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy kiniiesnvq piitkedpsi tqltkliege pefkivrege titkvihgep
      721 iiktytkiid grpvevtekk vteeriiqgp eikytritag gsdneeklkk ileeevtkvt
      781 kfiegdghll edeeikrllq gagteytkvt kviegepqii ereikkvhle eapvrkaqpt
      841 rraqgggarr rtrldhs
//
LOCUS       XP_041322957             841 aa            linear   VRT 06-MAY-2021
DEFINITION  periostin isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041322957
VERSION     XP_041322957.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467023.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..841
                     /product="periostin isoform X8"
                     /calculated_mol_wt=94236
     Region          110..231
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          246..368
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          383..495
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          508..631
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     CDS             1..841
                     /gene="POSTN"
                     /coded_by="XM_041467023.1:72..2597"
                     /db_xref="GeneID:121353290"
ORIGIN      
        1 mkifflftfl tfllsafeqa aayahydkil thsrirardq gpnvcalqqv mgtkkkyfst
       61 crnwyqqsic gkkatvlyec cpgymkmdgt rgcpavapid hvygtlgivg atttqrysdm
      121 sklreeiegr gsftffapsn eawdqldset hrnlvdnvni elynslhhhm lnkrmltkdl
      181 kngmtlvsmy ngqklfinhy pngvvtvnca riihgnqiat ngvvhvidrv ltsvantiqd
      241 fiefeddlss frapaitsgv mdilgrpghy tifaptneaf eklprgvler imgdkvasea
      301 lvkfhilntl qcseaitgga vyetlegntv evgcdgeslt vngvkmvkrk divrsngvih
      361 lidqvlipds akqvielgga qqttftdlva qlglasslrp egqytllapl ngafsddtlr
      421 ldqrllktil qnhiikvkvg lnelyngqel etiggkllrv fvyrtavcie nscmvrgske
      481 grngfihvfr qiinpaektl hemlrndkrf siflslvkaa dlddvlsrpg qwtlfvptnd
      541 afkgltdddk dilirdknal rnillyhltq gvfigsgfep gvtnilktiq ggklylktvn
      601 dtllvnelks resdlmatng vihvidklly paelpvgndq lltilkklik yiqikfvrds
      661 tfkeipltfy npsitqltkl iegepefkiv regetitkvi hgepiiktyt kiidgrpvev
      721 tekkvteeri iqgpeikytr itaggsdnee klkkileeev tkvtkfiegd ghlledeeik
      781 rllqgagtey tkvtkviege pqiiereikk vhleeapvrk aqptrraqgg garrrtrldh
      841 s
//
LOCUS       XP_041322958             303 aa            linear   VRT 06-MAY-2021
DEFINITION  epithelial-stromal interaction protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322958
VERSION     XP_041322958.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467024.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="epithelial-stromal interaction protein 1"
                     /calculated_mol_wt=35345
     Region          <131..>275
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..303
                     /gene="EPSTI1"
                     /coded_by="XM_041467024.1:48..959"
                     /db_xref="GeneID:121353291"
ORIGIN      
        1 msgvggwkeg sryraatafn tpsssqsnpw hgnnetekde ntqeltasgg kqrgqasvhq
       61 qqqkqyvgpy vlvtpnetrr kqlqqiakke lddleqwkke hrpgpitlvp qrlggnesea
      121 qvrqnqqmil mqskyqkkhk reeyvkskka aeeaeilkkk aiqrekaerl evkkrqeemq
      181 rremlledqk yktnellnrl dvglpksdsc qianpgpest awkrshaykq alredenrrl
      241 eemrqeqrrk aellefkqkq eeetrtralk neqrrvnnaf ldrlqnkgqp nniynpgyng
      301 lpq
//
LOCUS       XP_041322959            1180 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-17 [Pyrgilauda ruficollis].
ACCESSION   XP_041322959
VERSION     XP_041322959.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467025.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1180
                     /product="protocadherin-17"
                     /calculated_mol_wt=127514
     Region          21..123
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          152..250
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(154..155,213,215,246,248..249)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          258..358
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(265..266,321,323,354,356..357)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          372..470
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(374..375,433,435,466,468..469)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          479..580
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(485..486,543,545,576,578..579)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          595..683
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..1180
                     /gene="PCDH17"
                     /coded_by="XM_041467025.1:203..3745"
                     /db_xref="GeneID:121353293"
ORIGIN      
        1 mylsiccfff cwapalslkn lnysvpeeqg agtvignigr darlaagaag ggmlpaergv
       61 pgggpgggrg pkstfrvlen saphlldvdg esgllytkqr idrealcrrs akcqlslevf
      121 andqeicmik veiqdlndna psfpsdqvdm disenaapgt rfpltsahdp dagdnglrty
      181 lltrddyglf sldvksrgdg tkfpelviqk pldreeqshh tlvltaldgg dpprsgtvqi
      241 nvrlidsndn spifeaasyv velpenaplg tavidlnatd adegtngevl ysfsgyaper
      301 vrdlfsidpq sglirvkgnl dyeesgliei dvqardlgpn pipahckvtv rlidrndnap
      361 tigfvsvrqg alseaappgt vialvrvtdr dsgkngqlqc rvlgggggpg avpftleeny
      421 dnfytvvtdr pldretqdey nvtivardgg npplnstksf svrildendn pprfsknlyv
      481 lqvpennipg eylgsvlaqd pdlgqngtvs ysilpghvgd vsiytyvsvn ptngaiyalr
      541 sfnyeqtkhf efrvlakdsg sphresnatv rvtvldvndn aplivlpali ndtaelqvpr
      601 nagvgypvgt vraldsdfge sgrltyeive gneehlfemd ptsgeirtlh pyweelspva
      661 elvvkvsdhg kpslsavakl ivralagplp eagepqvnge qhrrphwdls lplivtlstv
      721 siillaamit iavkckrenk eirtyncria eyshpqlggg ggsggggggs gsgggkgkkk
      781 kiskndimlv psegedsrgp lnvmnvvssp slatspmyfd yqtrlplssp rsevmylkpa
      841 snnltvpqgh vgchtsftgq gtnaseapps rmsiiqtdnf paepnymgsr qqfvqssstf
      901 kdperaslrd sghgdsdqad sdqdtnkgsc cdmsvrealk mkttstksqp leqeqeecvn
      961 ctdecrvlgh sdrcwmpqfp aasqaenady rtnlfvptve anvetetyet vnptgkktfc
     1021 tfgkdkreht ilianvkpyl kakralspll qevpsasssp tktciepcts tkgpldgcev
     1081 ksgalaepss qylstdsqyl spskqskdas fiasdqmara fadvhsrvsr dssemdsvle
     1141 qldrsardlg resvdaeevv reidkllqdc rgsdpvairk
//
LOCUS       XP_041322960             503 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322960
VERSION     XP_041322960.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467026.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="5-hydroxytryptamine receptor 2A isoform X1"
                     /calculated_mol_wt=56177
     Region          71..423
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          73..97
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          106..128
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          145..167
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          190..238
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          265..288
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          354..376
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          391..416
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..503
                     /gene="HTR2A"
                     /coded_by="XM_041467026.1:558..2069"
                     /db_xref="GeneID:121353294"
ORIGIN      
        1 mdilcdgess vnptansfiq inherrfyrn vygageinis hlcnltvnsd nltnlscesn
       61 msppccpsqk nwpalltviv ivltiagnil vimavslekk lqnatnyflm slaiadmllg
      121 flvmpvsmlt ilygyewplp rklcaiwiyl dvlfstasim hlcaisldry iairnpihhs
      181 rfnsrtkafa kiiavwtisv gticvslniq spragswkar tskpasihln hpgismpvpv
      241 fglqddskvf kkdmfkkdic lladenfvlv gsfvaffipl timvvtyflt ikslqkeaml
      301 cvndigpktk ftsfsflpqs slsseklfqr slnrdtgtsg rrtmqsisne qkaskvlgiv
      361 fflfvvmwcp ffitnvmavi ckesckeevi ggllnifvwi gylssavnpl vytlfnktyr
      421 safsryiqcr ykeekkpfql ilvntipala ydsrqlqlaq mkslkkeakm makdystvti
      481 gthrldgtak gnigpgnekv sgv
//
LOCUS       XP_041322961             503 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322961
VERSION     XP_041322961.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467027.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="5-hydroxytryptamine receptor 2A isoform X1"
                     /calculated_mol_wt=56177
     Region          71..423
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          73..97
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          106..128
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          145..167
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          190..238
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          265..288
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          354..376
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          391..416
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..503
                     /gene="HTR2A"
                     /coded_by="XM_041467027.1:423..1934"
                     /db_xref="GeneID:121353294"
ORIGIN      
        1 mdilcdgess vnptansfiq inherrfyrn vygageinis hlcnltvnsd nltnlscesn
       61 msppccpsqk nwpalltviv ivltiagnil vimavslekk lqnatnyflm slaiadmllg
      121 flvmpvsmlt ilygyewplp rklcaiwiyl dvlfstasim hlcaisldry iairnpihhs
      181 rfnsrtkafa kiiavwtisv gticvslniq spragswkar tskpasihln hpgismpvpv
      241 fglqddskvf kkdmfkkdic lladenfvlv gsfvaffipl timvvtyflt ikslqkeaml
      301 cvndigpktk ftsfsflpqs slsseklfqr slnrdtgtsg rrtmqsisne qkaskvlgiv
      361 fflfvvmwcp ffitnvmavi ckesckeevi ggllnifvwi gylssavnpl vytlfnktyr
      421 safsryiqcr ykeekkpfql ilvntipala ydsrqlqlaq mkslkkeakm makdystvti
      481 gthrldgtak gnigpgnekv sgv
//
LOCUS       XP_041322962             499 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322962
VERSION     XP_041322962.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467028.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..499
                     /product="5-hydroxytryptamine receptor 2A isoform X2"
                     /calculated_mol_wt=55835
     Region          71..423
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          73..97
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          106..128
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          145..167
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          190..238
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          265..288
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          354..376
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          391..416
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..499
                     /gene="HTR2A"
                     /coded_by="XM_041467028.1:719..2218"
                     /db_xref="GeneID:121353294"
ORIGIN      
        1 mdilcdgess vnptansfiq inherrfyrn vygageinis hlcnltvnsd nltnlscesn
       61 msppccpsqk nwpalltviv ivltiagnil vimavslekk lqnatnyflm slaiadmllg
      121 flvmpvsmlt ilygyewplp rklcaiwiyl dvlfstasim hlcaisldry iairnpihhs
      181 rfnsrtkafa kiiavwtisv gticvslniq spragswkar tskpasihln hpgismpvpv
      241 fglqddskvf kkdmfkkdic lladenfvlv gsfvaffipl timvvtyflt ikslqkeaml
      301 cvndigpktk ftsfsflpqs slsseklfqr slnrdtgtsg rrtmqsisne qkaskvlgiv
      361 fflfvvmwcp ffitnvmavi ckesckeevi ggllnifvwi gylssavnpl vytlfnktyr
      421 safsryiqcr ykeekkpfql ilvntipala ydsrqlqlaq mkslkkeakm makdystvti
      481 gthrldgtak gnigpgnek
//
LOCUS       XP_041322965             471 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322965
VERSION     XP_041322965.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467031.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="5-hydroxytryptamine receptor 2A isoform X3"
                     /calculated_mol_wt=52767
     Region          71..391
                     /region_name="7tmA_5-HT2A"
                     /note="serotonin receptor subtype 2A, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15304"
                     /db_xref="CDD:341345"
     Region          72..98
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341345"
     Region          105..131
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341345"
     Region          144..174
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341345"
     Site            order(148,151..152,155..156,228,235..236,239,243,336,
                     339..340,343,346,359,362..363,366,370)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:341345"
     Region          186..209
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341345"
     Region          232..261
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341345"
     Region          316..346
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341345"
     Region          359..384
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341345"
     CDS             1..471
                     /gene="HTR2A"
                     /coded_by="XM_041467031.1:719..2134"
                     /db_xref="GeneID:121353294"
ORIGIN      
        1 mdilcdgess vnptansfiq inherrfyrn vygageinis hlcnltvnsd nltnlscesn
       61 msppccpsqk nwpalltviv ivltiagnil vimavslekk lqnatnyflm slaiadmllg
      121 flvmpvsmlt ilygyewplp rklcaiwiyl dvlfstasim hlcaisldry iairnpihhs
      181 rfnsrtkafa kiiavwtisv gismpvpvfg lqddskvfkk dmfkkdicll adenfvlvgs
      241 fvaffiplti mvvtyfltik slqkeamlcv ndigpktkft sfsflpqssl sseklfqrsl
      301 nrdtgtsgrr tmqsisneqk askvlgivff lfvvmwcpff itnvmavick esckeevigg
      361 llnifvwigy lssavnplvy tlfnktyrsa fsryiqcryk eekkpfqlil vntipalayd
      421 srqlqlaqmk slkkeakmma kdystvtigt hrldgtakgn igpgnekvsg v
//
LOCUS       XP_041322966             384 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322966
VERSION     XP_041322966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="5-hydroxytryptamine receptor 2A isoform X4"
                     /calculated_mol_wt=43254
     Region          <15..304
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          26..48
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..119
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          146..169
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          235..257
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..384
                     /gene="HTR2A"
                     /coded_by="XM_041467032.1:360..1514"
                     /db_xref="GeneID:121353294"
ORIGIN      
        1 melktkdfsf wnnsgyewpl prklcaiwiy ldvlfstasi mhlcaisldr yiairnpihh
       61 srfnsrtkaf akiiavwtis vgticvslni qspragswka rtskpasihl nhpgismpvp
      121 vfglqddskv fkkdmfkkdi clladenfvl vgsfvaffip ltimvvtyfl tikslqkeam
      181 lcvndigpkt kftsfsflpq sslsseklfq rslnrdtgts grrtmqsisn eqkaskvlgi
      241 vfflfvvmwc pffitnvmav ickesckeev iggllnifvw igylssavnp lvytlfnkty
      301 rsafsryiqc rykeekkpfq lilvntipal aydsrqlqla qmkslkkeak mmakdystvt
      361 igthrldgta kgnigpgnek vsgv
//
LOCUS       XP_041322967             384 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322967
VERSION     XP_041322967.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467033.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="5-hydroxytryptamine receptor 2A isoform X4"
                     /calculated_mol_wt=43254
     Region          <15..304
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          26..48
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..119
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          146..169
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          235..257
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..384
                     /gene="HTR2A"
                     /coded_by="XM_041467033.1:388..1542"
                     /db_xref="GeneID:121353294"
ORIGIN      
        1 melktkdfsf wnnsgyewpl prklcaiwiy ldvlfstasi mhlcaisldr yiairnpihh
       61 srfnsrtkaf akiiavwtis vgticvslni qspragswka rtskpasihl nhpgismpvp
      121 vfglqddskv fkkdmfkkdi clladenfvl vgsfvaffip ltimvvtyfl tikslqkeam
      181 lcvndigpkt kftsfsflpq sslsseklfq rslnrdtgts grrtmqsisn eqkaskvlgi
      241 vfflfvvmwc pffitnvmav ickesckeev iggllnifvw igylssavnp lvytlfnkty
      301 rsafsryiqc rykeekkpfq lilvntipal aydsrqlqla qmkslkkeak mmakdystvt
      361 igthrldgta kgnigpgnek vsgv
//
LOCUS       XP_041322968             384 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041322968
VERSION     XP_041322968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467034.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="5-hydroxytryptamine receptor 2A isoform X4"
                     /calculated_mol_wt=43254
     Region          <15..304
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          26..48
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..119
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          146..169
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          235..257
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..384
                     /gene="HTR2A"
                     /coded_by="XM_041467034.1:342..1496"
                     /db_xref="GeneID:121353294"
ORIGIN      
        1 melktkdfsf wnnsgyewpl prklcaiwiy ldvlfstasi mhlcaisldr yiairnpihh
       61 srfnsrtkaf akiiavwtis vgticvslni qspragswka rtskpasihl nhpgismpvp
      121 vfglqddskv fkkdmfkkdi clladenfvl vgsfvaffip ltimvvtyfl tikslqkeam
      181 lcvndigpkt kftsfsflpq sslsseklfq rslnrdtgts grrtmqsisn eqkaskvlgi
      241 vfflfvvmwc pffitnvmav ickesckeev iggllnifvw igylssavnp lvytlfnkty
      301 rsafsryiqc rykeekkpfq lilvntipal aydsrqlqla qmkslkkeak mmakdystvt
      361 igthrldgta kgnigpgnek vsgv
//
LOCUS       XP_041322969            1683 aa            linear   VRT 06-MAY-2021
DEFINITION  complement C4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041322969
VERSION     XP_041322969.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467035.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1683
                     /product="complement C4-like"
                     /calculated_mol_wt=189340
     Region          21..112
                     /region_name="MG1"
                     /note="Macroglobulin domain MG1; pfam17790"
                     /db_xref="CDD:465508"
     Region          <129..1324
                     /region_name="YfaS"
                     /note="Uncharacterized conserved protein YfaS,
                     alpha-2-macroglobulin family [General function prediction
                     only]; COG2373"
                     /db_xref="CDD:441940"
     Region          976..1265
                     /region_name="complement_C3_C4_C5"
                     /note="Proteins similar to C3, C4 and C5 of vertebrate
                     complement. The vertebrate complement system, comprised of
                     a large number of distinct plasma proteins, is an effector
                     of both the acquired and innate immune systems. The point
                     of convergence of the...; cd02896"
                     /db_xref="CDD:239226"
     Site            order(990,992..993,996,1039,1049,1052,1102,1104..1105,
                     1249)
                     /site_type="other"
                     /note="surface patch"
                     /db_xref="CDD:239226"
     Site            order(990..993,1105)
                     /site_type="active"
                     /db_xref="CDD:239226"
     Site            990..993
                     /site_type="active"
                     /note="thioester region [active]"
                     /db_xref="CDD:239226"
     Site            order(1091,1095,1097,1105,1110..1111)
                     /site_type="other"
                     /note="specificity defining residues"
                     /db_xref="CDD:239226"
     Region          1423..1513
                     /region_name="A2M_recep"
                     /note="A-macroglobulin receptor binding domain; pfam07677"
                     /db_xref="CDD:462226"
     Region          1530..1675
                     /region_name="NTR_like"
                     /note="NTR_like domain; a beta barrel with an
                     oligosaccharide/oligonucleotide-binding fold found in
                     netrins, complement proteins, tissue inhibitors of
                     metalloproteases (TIMP), and procollagen C-proteinase
                     enhancers (PCOLCE), amongst others. In netrins, the...;
                     cl02512"
                     /db_xref="CDD:470599"
     CDS             1..1683
                     /gene="LOC121353296"
                     /coded_by="XM_041467035.1:1..5052"
                     /db_xref="GeneID:121353296"
ORIGIN      
        1 merlvllvsf clllsnteqa psflitapnv vhlgthetit vqvhgaqspv qvtaffkdet
       61 knqliseriy fnlnqnngyq emkkimvkpg rlqqslfkks nlpyvllvte skelptaaks
      121 trillsskkg yifiqtdkpi ytprsqvryr ifildnamrp tddtvtvavl nskgmvvkks
      181 drkintvfge hfdipdiaep gtwkikawfh qhemsnvste fevkryelps fevkliplhp
      241 fyhiwnesfv fdieakhsyg keiqgaayvr fgiidesenk ifipgleqql siqngkgrvt
      301 lntplleekl rksistlegf hlyvavttve tasgemreee lssvkfvrsp faldlsntkk
      361 yfvpgapfsv masstfvdgt paaflfvtat vtlpgkppvk ktafcnregl vsitfdiprd
      421 aqmleikvka eegkqrletp etslraeryq saspnylsis iphtvvapgd tlpitlndir
      481 qpgsgnigyf yymvvakgqa ellgrvpssn kivnlkitek mvpafrflay yfienggqqe
      541 iiadsvwvdv mdvcegkikv rteqdtyept dqvnlqiemd hagkvalavv dkavfilnkk
      601 nkltakkvfn amnsydlgcs vgggansiqv ftdvglafis dtiqssireg ykchqgnrrq
      661 krsldfqkkm sgiaskyqnt allkccqdgm rlnpmrfpca krvkkvsgsr ecrdafqdcc
      721 ekatalrkqa kqrnrvglar qyseheelfd etsvslrsyf peswwwsfee vespgkhsvk
      781 nfapdsittw evqaisispe kgfcvadphs favfkdffvs lrlpysvrrh eqleikavvy
      841 nylpndlqvt vkmeavkglc taettakavq lsllakgnsa tpaffsvvpl tvgeipitii
      901 afdhdsghsd sirknlrvva egvlqreeet icinsdlksh tvdlsrpsnm vpgsdshvfv
      961 slkgnimdqs venclslsgv ekliqvptgc aeqtmvkmap avyaieylda seqwvnfnpe
     1021 rkqeaismie kgyirllefq kedgsygafq rtpssiwlta fivkvltrsr eyfsiqdshi
     1081 tnsisylvnq qqadgsfhdh hpvwerkmqg gietaeddla mtafvtialq qtlrvfpspd
     1141 varvitgava ymknqlsrns dcysivitay altlvrsdse edqfvkgklr dcssfdkakq
     1201 qrywgngnna vsvettayal lqtlllddme yarpiatwlt errnygggfc stqdtvvale
     1261 alsaysiqtl dtsstdltvr lgtpgrqnyy sivltdaqee fqkqlefelg rklevsvngk
     1321 gngtmsilkm ywspelknnt csdliltvel egilkyseae ysdedddyed lttggnstfe
     1381 tlsrmdwfdi rsrrkrdltt pskteslqyk icvrstgpka pkmslvdltl lsglepdtke
     1441 leqlvtasdr yiqhfeykeg kvllyfgelp rgpepdcisf gakqinpmgl vqpanailyd
     1501 fynpdrscsv fysapkhsam lsklchadvc qcaegpcprq kstfsksltq ttrvsfvcyq
     1561 ptadyayeve ilssskknvf dyyeakihki lkasadesiq vgehrqflsr smcklniipg
     1621 kryllmgrdg qtvdcnnkmq ylldaqawve kipedsecrs slrrqscarl qdflstsdsl
     1681 chv
//
LOCUS       XP_041322970             915 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-20 [Pyrgilauda ruficollis].
ACCESSION   XP_041322970
VERSION     XP_041322970.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467036.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..915
                     /product="protocadherin-20"
                     /calculated_mol_wt=100095
     Region          43..>115
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          177..280
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(184..185,243,245,276,278..279)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          290..380
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          402..>476
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          504..599
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(510..511,562,564,595,597..598)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          608..702
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(614..615,665,667,698,700..701)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          718..809
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..915
                     /gene="PCDH20"
                     /coded_by="XM_041467036.1:39..2786"
                     /db_xref="GeneID:121353297"
ORIGIN      
        1 mgppggrgss sargslqhll lfllfvgpfn cfasysrate lfyslnegmp agvlignlar
       61 dlrlpmaggq qaaslqppls ftlashglgg qyvqldnrsg elhtsaveid realcvessg
      121 atifgglaav sssspspesc lllldvlvlp qeyfrlvkvk iairdvndna prfpvphirl
      181 svpenapvnt rlaiehpald pdmgtngvqt yrlrdnygvf tldveeneng ertpylivmg
      241 aldretqdey vtvivaedgg tpplvgsatl tigisdvndn cpqfndsqln vtlygnsslg
      301 thvttvhavd mdlgtnaqit ysysqkvpqp srdlfhlnes tgaitlstkv dgdtprlhrl
      361 iilgngpgci pavitvlvti ikvmmrppev vprfianeve gvvylkelep intpiaffti
      421 kdpdekykvs cyldgdgpfr lspykpynne yllettkpld fetqqlyeis ivawnskgfh
      481 vkkvvkvqvl ddndnspvfs eqlielsiee nnvpnafltk lhatdadsge rgqvsyflgp
      541 dapsyfaldk ttgvltvstq ldreekekyr ytvkavdsgf ppresiatvt itvldkndns
      601 prfinkdfsf fvpenfpgfg eigvisvtda dagqngwval svlngsdifv idtgkgvlra
      661 kvsldreqqs syilwieavd ggdpalssta kitillldin dnpplvlfpq snmsyllvlp
      721 stlpgspite vyavdkdtgm naviaysiig rrgprpesfr idpktgnitl eeslmqndyg
      781 lyrllvkvsd hgypeplhst vmvnlfvndt vsnesyiesl lrkepdisve ekqpqisiep
      841 thkkmesasc mptlvalsii slgsialvtg mgiyiclrkg kehhradenl evqiplngri
      901 slhmlekkpm eisni
//
LOCUS       XP_041322971             424 aa            linear   VRT 06-MAY-2021
DEFINITION  carboxypeptidase B2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322971
VERSION     XP_041322971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="carboxypeptidase B2"
                     /calculated_mol_wt=49182
     Region          30..106
                     /region_name="Propep_M14"
                     /note="Carboxypeptidase activation peptide; pfam02244"
                     /db_xref="CDD:460505"
     Region          120..421
                     /region_name="M14_CPB2"
                     /note="Peptidase M14 carboxypeptidase subfamily A/B-like;
                     Carboxypeptidase B2 subgroup; cd06246"
                     /db_xref="CDD:349465"
     Site            order(182,185,242,259..260,312..313,319,386)
                     /site_type="active"
                     /db_xref="CDD:349465"
     CDS             1..424
                     /gene="CPB2"
                     /coded_by="XM_041467037.1:1..1275"
                     /db_xref="GeneID:121353298"
ORIGIN      
        1 mkmkfylfff tffilvpkkh vftiprdevl walpktdeqv ealqdllntt evilwqpvvv
       61 eniqkdrevh fyvrassins ikaqlrqlti qhkvlmgdvq giieqqtvnd tvnargsssy
      121 yenyhsmkei yrwmeavvkv hsdllqkiyi gssyekrply vlkiskskek sknaiwidcg
      181 iharewispa fclwfighai hvrerdrtmt tllehfdfyi mpvinvdgye ytwshpsnrl
      241 wrksrsshgn skcigtdmnr nfdahwcgpg ashsecqeiy cgpypesepe vkavarfvrd
      301 hkdtikayit mhsysqmilf pysytmnrsk dheeleslaq kaakaikrtt wktyrpgaga
      361 qtiylapggs ddwaydlgik ysftfelrdt gtygfllpar eikptcleal savkeiaqhv
      421 lqnl
//
LOCUS       XP_041322972             321 aa            linear   VRT 06-MAY-2021
DEFINITION  dolichyl-phosphate beta-glucosyltransferase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322972
VERSION     XP_041322972.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467038.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="dolichyl-phosphate beta-glucosyltransferase
                     isoform X1"
                     /calculated_mol_wt=36032
     Region          67..287
                     /region_name="DPG_synthase"
                     /note="DPG_synthase is involved in protein N-linked
                     glycosylation; cd04188"
                     /db_xref="CDD:133031"
     Site            order(70,72,163)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133031"
     Site            order(108,162..163)
                     /site_type="active"
                     /note="Putative Catalytic site [active]"
                     /db_xref="CDD:133031"
     Site            161..163
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133031"
     CDS             1..321
                     /gene="ALG5"
                     /coded_by="XM_041467038.1:23..988"
                     /db_xref="GeneID:121353300"
ORIGIN      
        1 malpplpslp ltlpaaalal atlaafllvl icviahvtak tmphedaecr kgsapnihdp
       61 atrglsvvvp syneenrlpl mmdealdyle krqkqdpsft yevivvndgs kdqtakvake
      121 yckkygsdkv rvitleknrg kggavrtgvf ssrgkmilma dadgatkfad iekveeglks
      181 lqpwpegmai scgsrahlek dsiakrsyfr tllmygfhfl vwflcvkeir dtqcgfkllt
      241 reaalqtfsn lhierwafdv ellyiaqrlk ipiaevavnw teiegsklvp fwswlqmgrd
      301 llfirlrymt gawkleakkh n
//
LOCUS       XP_041322973             280 aa            linear   VRT 06-MAY-2021
DEFINITION  dolichyl-phosphate beta-glucosyltransferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322973
VERSION     XP_041322973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..280
                     /product="dolichyl-phosphate beta-glucosyltransferase
                     isoform X2"
                     /calculated_mol_wt=31929
     Region          26..246
                     /region_name="DPG_synthase"
                     /note="DPG_synthase is involved in protein N-linked
                     glycosylation; cd04188"
                     /db_xref="CDD:133031"
     Site            order(29,31,122)
                     /site_type="active"
                     /note="Ligand binding site [active]"
                     /db_xref="CDD:133031"
     Site            order(67,121..122)
                     /site_type="active"
                     /note="Putative Catalytic site [active]"
                     /db_xref="CDD:133031"
     Site            120..122
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133031"
     CDS             1..280
                     /gene="ALG5"
                     /coded_by="XM_041467039.1:410..1252"
                     /db_xref="GeneID:121353300"
ORIGIN      
        1 mphedaecrk gsapnihdpa trglsvvvps yneenrlplm mdealdylek rqkqdpsfty
       61 evivvndgsk dqtakvakey ckkygsdkvr vitleknrgk ggavrtgvfs srgkmilmad
      121 adgatkfadi ekveeglksl qpwpegmais cgsrahlekd siakrsyfrt llmygfhflv
      181 wflcvkeird tqcgfklltr eaalqtfsnl hierwafdve llyiaqrlki piaevavnwt
      241 eiegsklvpf wswlqmgrdl lfirlrymtg awkleakkhn
//
LOCUS       XP_041322974             489 aa            linear   VRT 06-MAY-2021
DEFINITION  cytidine and dCMP deaminase domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322974
VERSION     XP_041322974.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467040.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="cytidine and dCMP deaminase domain-containing
                     protein 1"
                     /calculated_mol_wt=54885
     Region          54..123
                     /region_name="cytidine_deaminase-like"
                     /note="Cytidine and deoxycytidylate deaminase zinc-binding
                     region. The family contains cytidine deaminases,
                     nucleoside deaminases, deoxycytidylate deaminases and
                     riboflavin deaminases. Also included are the apoBec family
                     of mRNA editing enzymes. All members...; cl00269"
                     /db_xref="CDD:444801"
     Site            order(81..83,105..106,109)
                     /site_type="active"
                     /db_xref="CDD:238406"
     Site            order(81,83,106,109)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:238406"
     Region          294..437
                     /region_name="deoxycytidylate_deaminase"
                     /note="Deoxycytidylate deaminase domain. Deoxycytidylate
                     deaminase catalyzes the deamination of dCMP to dUMP,
                     providing the nucleotide substrate for thymidylate
                     synthase. The enzyme binds Zn++, which is required for
                     catalytic activity. The activity of the...; cd01286"
                     /db_xref="CDD:238613"
     Site            order(335,373,375,400..401,404)
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:238613"
     Site            order(373,375,401,404)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:238613"
     CDS             1..489
                     /gene="CDADC1"
                     /coded_by="XM_041467040.1:93..1562"
                     /db_xref="GeneID:121353301"
ORIGIN      
        1 mhgaeeaaag prvkaastqt dsmagqmprl skvnlftlls lwmelfpsae qqkksqvkks
       61 glvvvknmki iglhcsstdl hagqialikh gsrlkncdly fsrkpcstcl kmivnagvnr
      121 isywpadpei slqnevsnpt stgdakldak averlksnsr arvcvllqpl vcymvqfiee
      181 tsakfdfiqk iaksqpgynt dfyttcrqer ikeyeslfli sneemhkqil mtiglenlce
      241 npyfsnlrqn mkdlvlvlas vaasvpvfgc fgfyrsgsqr tneaddqclp qdvarhcmiq
      301 arllayrted hktgvgaiiw aeeksrgcdg tgamyfvgcg ynafpvgsey adfphmddkq
      361 kdreirkfry iihaeqnalt frcreikpde rsmifvtkcp cdecvplikg agikqiyagd
      421 ddagkkkadi symkfgeleg vsrftwqlsp lhtnalefhd ptarengiqk tkslddqqhq
      481 skklclghy
//
LOCUS       XP_041322976             334 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding protein 39-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322976
VERSION     XP_041322976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="calcium-binding protein 39-like isoform X1"
                     /calculated_mol_wt=38732
     Region          3..330
                     /region_name="Mo25"
                     /note="Mo25-like; pfam08569"
                     /db_xref="CDD:462522"
     CDS             1..334
                     /gene="CAB39L"
                     /coded_by="XM_041467042.1:398..1402"
                     /db_xref="GeneID:121353302"
ORIGIN      
        1 mplfskshkn paeivkvlke nmailekqek ktdkaseevs kslqamkeil cgttdkeppt
       61 eivaqlaqel ynsgllvtli anlqlidfeg kkdvsqifnn ilrrqigtrs ptveyisahp
      121 hilfmllkgy espnialrcg imlrecirhe plakiilfse qfrdffkyve mstfdiasda
      181 fatfkdlltr hkllvaefle qnydvifedy ekllhsenyv tkrqslkllg elildrhnfa
      241 imtkyiskpe nlklmmnllr dkspniqfea fhvfkvfvas pnktqpivei llknqpklie
      301 flsnfqkert ddeqftdekn ylikqirdlk kpta
//
LOCUS       XP_041322977             334 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding protein 39-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322977
VERSION     XP_041322977.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467043.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="calcium-binding protein 39-like isoform X1"
                     /calculated_mol_wt=38732
     Region          3..330
                     /region_name="Mo25"
                     /note="Mo25-like; pfam08569"
                     /db_xref="CDD:462522"
     CDS             1..334
                     /gene="CAB39L"
                     /coded_by="XM_041467043.1:376..1380"
                     /db_xref="GeneID:121353302"
ORIGIN      
        1 mplfskshkn paeivkvlke nmailekqek ktdkaseevs kslqamkeil cgttdkeppt
       61 eivaqlaqel ynsgllvtli anlqlidfeg kkdvsqifnn ilrrqigtrs ptveyisahp
      121 hilfmllkgy espnialrcg imlrecirhe plakiilfse qfrdffkyve mstfdiasda
      181 fatfkdlltr hkllvaefle qnydvifedy ekllhsenyv tkrqslkllg elildrhnfa
      241 imtkyiskpe nlklmmnllr dkspniqfea fhvfkvfvas pnktqpivei llknqpklie
      301 flsnfqkert ddeqftdekn ylikqirdlk kpta
//
LOCUS       XP_041322978             334 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding protein 39-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322978
VERSION     XP_041322978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="calcium-binding protein 39-like isoform X1"
                     /calculated_mol_wt=38732
     Region          3..330
                     /region_name="Mo25"
                     /note="Mo25-like; pfam08569"
                     /db_xref="CDD:462522"
     CDS             1..334
                     /gene="CAB39L"
                     /coded_by="XM_041467044.1:394..1398"
                     /db_xref="GeneID:121353302"
ORIGIN      
        1 mplfskshkn paeivkvlke nmailekqek ktdkaseevs kslqamkeil cgttdkeppt
       61 eivaqlaqel ynsgllvtli anlqlidfeg kkdvsqifnn ilrrqigtrs ptveyisahp
      121 hilfmllkgy espnialrcg imlrecirhe plakiilfse qfrdffkyve mstfdiasda
      181 fatfkdlltr hkllvaefle qnydvifedy ekllhsenyv tkrqslkllg elildrhnfa
      241 imtkyiskpe nlklmmnllr dkspniqfea fhvfkvfvas pnktqpivei llknqpklie
      301 flsnfqkert ddeqftdekn ylikqirdlk kpta
//
LOCUS       XP_041322979             334 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding protein 39-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322979
VERSION     XP_041322979.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467045.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="calcium-binding protein 39-like isoform X1"
                     /calculated_mol_wt=38732
     Region          3..330
                     /region_name="Mo25"
                     /note="Mo25-like; pfam08569"
                     /db_xref="CDD:462522"
     CDS             1..334
                     /gene="CAB39L"
                     /coded_by="XM_041467045.1:306..1310"
                     /db_xref="GeneID:121353302"
ORIGIN      
        1 mplfskshkn paeivkvlke nmailekqek ktdkaseevs kslqamkeil cgttdkeppt
       61 eivaqlaqel ynsgllvtli anlqlidfeg kkdvsqifnn ilrrqigtrs ptveyisahp
      121 hilfmllkgy espnialrcg imlrecirhe plakiilfse qfrdffkyve mstfdiasda
      181 fatfkdlltr hkllvaefle qnydvifedy ekllhsenyv tkrqslkllg elildrhnfa
      241 imtkyiskpe nlklmmnllr dkspniqfea fhvfkvfvas pnktqpivei llknqpklie
      301 flsnfqkert ddeqftdekn ylikqirdlk kpta
//
LOCUS       XP_041322980             334 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding protein 39-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322980
VERSION     XP_041322980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="calcium-binding protein 39-like isoform X1"
                     /calculated_mol_wt=38732
     Region          3..330
                     /region_name="Mo25"
                     /note="Mo25-like; pfam08569"
                     /db_xref="CDD:462522"
     CDS             1..334
                     /gene="CAB39L"
                     /coded_by="XM_041467046.1:614..1618"
                     /db_xref="GeneID:121353302"
ORIGIN      
        1 mplfskshkn paeivkvlke nmailekqek ktdkaseevs kslqamkeil cgttdkeppt
       61 eivaqlaqel ynsgllvtli anlqlidfeg kkdvsqifnn ilrrqigtrs ptveyisahp
      121 hilfmllkgy espnialrcg imlrecirhe plakiilfse qfrdffkyve mstfdiasda
      181 fatfkdlltr hkllvaefle qnydvifedy ekllhsenyv tkrqslkllg elildrhnfa
      241 imtkyiskpe nlklmmnllr dkspniqfea fhvfkvfvas pnktqpivei llknqpklie
      301 flsnfqkert ddeqftdekn ylikqirdlk kpta
//
LOCUS       XP_041322981             332 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding protein 39-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041322981
VERSION     XP_041322981.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467047.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..332
                     /product="calcium-binding protein 39-like isoform X2"
                     /calculated_mol_wt=38349
     Region          3..284
                     /region_name="Mo25"
                     /note="Mo25-like; pfam08569"
                     /db_xref="CDD:462522"
     CDS             1..332
                     /gene="CAB39L"
                     /coded_by="XM_041467047.1:398..1396"
                     /db_xref="GeneID:121353302"
ORIGIN      
        1 mplfskshkn paeivkvlke nmailekqek ktdkaseevs kslqamkeil cgttdkeppt
       61 eivaqlaqel ynsgllvtli anlqlidfeg kkdvsqifnn ilrrqigtrs ptveyisahp
      121 hilfmllkgy espnialrcg imlrecirhe plakiilfse qfrdffkyve mstfdiasda
      181 fatfkdlltr hkllvaefle qnydvifedy ekllhsenyv tkrqslkllg elildrhnfa
      241 imtkyiskpe nlklmmnllr dkspniqfea fhvfkvmvdl phnsslfsff lpekngpsal
      301 qhhpkglqll sktgcprqrt hkdyqylimr ks
//
LOCUS       XP_041322982             107 aa            linear   VRT 06-MAY-2021
DEFINITION  serine-rich and transmembrane domain-containing protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041322982
VERSION     XP_041322982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..107
                     /product="serine-rich and transmembrane domain-containing
                     protein 1"
                     /calculated_mol_wt=11341
     Region          1..106
                     /region_name="SRTM1"
                     /note="Serine-rich and transmembrane domain-containing
                     protein 1; pfam15872"
                     /db_xref="CDD:318153"
     CDS             1..107
                     /gene="SERTM1"
                     /coded_by="XM_041467048.1:718..1041"
                     /db_xref="GeneID:121353303"
ORIGIN      
        1 msepdpssgf vgsmengtfl elyptslsts vdsspgrlsn vyvyvsifls llafllllli
       61 ialqrlknii sssssypeyn sdagssftnl evcsissqrs alsnlss
//
LOCUS       XP_041322983             490 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase Nek3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322983
VERSION     XP_041322983.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467049.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="serine/threonine-protein kinase Nek3"
                     /calculated_mol_wt=55615
     Region          4..257
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(10..13,16,18,31,33,63,79..82,127,131..132,134,
                     144..145)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..490
                     /gene="NEK3"
                     /coded_by="XM_041467049.1:133..1605"
                     /db_xref="GeneID:121353304"
ORIGIN      
        1 megynmlkvl gegsfgrall vhhrisdqky vmkeirlpms ssgvensrke avllakmkhp
       61 nivafkesfe adghlyivme ycddgdlmqk ikhqggnlfp edmilhwfvq mclavkhihd
      121 krvlhrdiks knvfltqsgn vklgdfgsar llahpmsyac tyvgtpyyvp peiweslpyn
      181 nksdiwslgc ilyelctlkh pfqanswkhl ilkickgsyd plpshysyel hylikqmfkr
      241 npqnrpsast ilargclskl vknclpsgia nefeqilket kkpegnaarq kgrvvaggss
      301 nnktentrrk desskhsple rknaeglseg treqrksyqe gstdlshahr rqwekrisnt
      361 vldvlenasl lsssftpeet esggvinyse nrpqkqwnke ppqtlmdmls nadvslafkt
      421 ytiytpasen ilrgplsdes easdevdgeh eavvidserl eprsdeddtd feeddpdwvs
      481 elqmvlkqsd
//
LOCUS       XP_041322984              85 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-fold modifier 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041322984
VERSION     XP_041322984.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467050.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..85
                     /product="ubiquitin-fold modifier 1"
                     /calculated_mol_wt=8956
     Region          4..78
                     /region_name="Ubl_UFM1"
                     /note="ubiquitin-like (Ubl) domain found in ubiquitin fold
                     modifier 1 (UFM1); cd01766"
                     /db_xref="CDD:340465"
     Site            order(19..24,28,31..32,35)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:340465"
     CDS             1..85
                     /gene="UFM1"
                     /coded_by="XM_041467050.1:69..326"
                     /db_xref="GeneID:121353305"
ORIGIN      
        1 mskvtfkvtl tsdprlpykv lsvpestpft avlkfaaeef kvpaatsaii tndgiginpa
       61 qtagnvflkh gsdlrliprd rvgss
//
LOCUS       XP_041322985             409 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase TRIM13 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322985
VERSION     XP_041322985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467051.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="E3 ubiquitin-protein ligase TRIM13 isoform X1"
                     /calculated_mol_wt=47133
     Region          6..62
                     /region_name="RING-HC_TRIM13_C-V"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 13 (TRIM13) and similar proteins;
                     cd16762"
                     /db_xref="CDD:438418"
     Region          93..134
                     /region_name="Bbox2_TRIM13_C-XI"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 13 (TRIM13) and similar proteins;
                     cd19767"
                     /db_xref="CDD:380825"
     CDS             1..409
                     /gene="TRIM13"
                     /coded_by="XM_041467051.1:152..1381"
                     /db_xref="GeneID:121353307"
ORIGIN      
        1 mmelleedlt cpiccslfdd prvlpcshnf crkclegile gnvrnvlwrp spfkcptcrk
       61 etpvtgvnsl qvnyslkgiv ekynkikvtp kmpvckvhsg qplnifcrtd mqlicgvcat
      121 rgdhtkhvfc sieeaysqek rafetlfqgf etwrcgdals rldtletskr kalqmltkds
      181 dkvkeffekl qhtleqkrne ilsdfetmkl avmqaydpei nklntilqeq rmafniaeaf
      241 kdvsepiifl qqmqefreki kvlketplpc stvdisptmk sfdtsqwngi klvdvdklsl
      301 pqesntfkfk ipsvfsrrfi vnslifllil avtrmsfves vidnlqywks qflticlsyl
      361 adtveiadha vfyweqmtdg asllrekckn ytlvvldnva qfvckykll
//
LOCUS       XP_041322986             411 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase TRIM13 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322986
VERSION     XP_041322986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="E3 ubiquitin-protein ligase TRIM13 isoform X2"
                     /calculated_mol_wt=47379
     Region          8..64
                     /region_name="RING-HC_TRIM13_C-V"
                     /note="RING finger, HC subclass, found in tripartite
                     motif-containing protein 13 (TRIM13) and similar proteins;
                     cd16762"
                     /db_xref="CDD:438418"
     Region          95..136
                     /region_name="Bbox2_TRIM13_C-XI"
                     /note="B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 13 (TRIM13) and similar proteins;
                     cd19767"
                     /db_xref="CDD:380825"
     CDS             1..411
                     /gene="TRIM13"
                     /coded_by="XM_041467052.1:148..1383"
                     /db_xref="GeneID:121353307"
ORIGIN      
        1 mdmmelleed ltcpiccslf ddprvlpcsh nfcrkclegi legnvrnvlw rpspfkcptc
       61 rketpvtgvn slqvnyslkg ivekynkikv tpkmpvckvh sgqplnifcr tdmqlicgvc
      121 atrgdhtkhv fcsieeaysq ekrafetlfq gfetwrcgda lsrldtlets krkalqmltk
      181 dsdkvkeffe klqhtleqkr neilsdfetm klavmqaydp einklntilq eqrmafniae
      241 afkdvsepii flqqmqefre kikvlketpl pcstvdispt mksfdtsqwn giklvdvdkl
      301 slpqesntfk fkipsvfsrr fivnslifll ilavtrmsfv esvidnlqyw ksqflticls
      361 yladtveiad havfyweqmt dgasllrekc knytlvvldn vaqfvckykl l
//
LOCUS       XP_041322987             270 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium channel regulatory protein [Pyrgilauda ruficollis].
ACCESSION   XP_041322987
VERSION     XP_041322987.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467053.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="potassium channel regulatory protein"
                     /calculated_mol_wt=30423
     Region          5..101
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     CDS             1..270
                     /gene="KCNRG"
                     /coded_by="XM_041467053.1:331..1143"
                     /db_xref="GeneID:121353308"
ORIGIN      
        1 mssrevvvls vggvrfvtra stlqqfpesr lahmvndddq efklvngeff vdrdgalfsy
       61 imdflrtlqv slppdfsdyq rlqreaefyg lyplanllsq ehllkprlei levrfslqem
      121 haffrifgsc sttiealaeq itvftgqqpg qgwnspflsq kplvplpler pshhdmvflc
      181 gteysagdqf varyvsikpd krklingtnv lgllldtllr dgfrlistrt agseekvecy
      241 tfermkraag laimenqtpg ssgvaqarrs
//
LOCUS       XP_041322989             350 aa            linear   VRT 06-MAY-2021
DEFINITION  GPALPP motifs-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322989
VERSION     XP_041322989.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467055.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="GPALPP motifs-containing protein 1 isoform X1"
                     /calculated_mol_wt=39386
     Region          206..341
                     /region_name="DUF3752"
                     /note="Protein of unknown function (DUF3752); pfam12572"
                     /db_xref="CDD:463632"
     CDS             1..350
                     /gene="GPALPP1"
                     /coded_by="XM_041467055.1:73..1125"
                     /db_xref="GeneID:121353310"
ORIGIN      
        1 marqligpal ppgfprrtea epgedfsqva gpalppdyks scssetpdsd ddseslplpr
       61 danrdseeet egdpaskkpk rihedddddg ffgpalppgf kkqddsperp iigpalppgf
      121 rkasedtrss rcfigpsvss esrpqltdss edednligpm pakgpvesdv akeferraqr
      181 mkekltsads depkqvtres wmtelppelk sfgfgprtfk rraddksgdr siwtdtpadr
      241 erkakereea kkssskdnee mvlsgrdkrl ieqvtsynes krseslmdmh qkklkskase
      301 ekskpqerrp fdreqdlkvn rfdeaqkkal irksrdlnsk fehskgnmfl
//
LOCUS       XP_041322990             348 aa            linear   VRT 06-MAY-2021
DEFINITION  GPALPP motifs-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322990
VERSION     XP_041322990.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467056.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..348
                     /product="GPALPP motifs-containing protein 1 isoform X2"
                     /calculated_mol_wt=39215
     Region          204..339
                     /region_name="DUF3752"
                     /note="Protein of unknown function (DUF3752); pfam12572"
                     /db_xref="CDD:463632"
     CDS             1..348
                     /gene="GPALPP1"
                     /coded_by="XM_041467056.1:73..1119"
                     /db_xref="GeneID:121353310"
ORIGIN      
        1 marqligpal ppgfprrtea epgedfsqgp alppdykssc ssetpdsddd seslplprda
       61 nrdseeeteg dpaskkpkri hedddddgff gpalppgfkk qddsperpii gpalppgfrk
      121 asedtrssrc figpsvsses rpqltdssed ednligpmpa kgpvesdvak eferraqrmk
      181 ekltsadsde pkqvtreswm telppelksf gfgprtfkrr addksgdrsi wtdtpadrer
      241 kakereeakk ssskdneemv lsgrdkrlie qvtsyneskr seslmdmhqk klkskaseek
      301 skpqerrpfd reqdlkvnrf deaqkkalir ksrdlnskfe hskgnmfl
//
LOCUS       XP_041322991             338 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SGT1 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041322991
VERSION     XP_041322991.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467057.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..338
                     /product="protein SGT1 homolog"
                     /calculated_mol_wt=37963
     Region          23..338
                     /region_name="PLN03088"
                     /note="SGT1, suppressor of G2 allele of SKP1; Provisional"
                     /db_xref="CDD:215568"
     Region          46..76
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          81..109
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..338
                     /gene="SUGT1"
                     /coded_by="XM_041467057.1:89..1105"
                     /db_xref="GeneID:121353311"
ORIGIN      
        1 megeaaaaaa sasaaapprf sdadvdrdpg aaaqelttal eknpddaecy cqrayahill
       61 qkyadavada kkslelnpnn aiallrkglg eyhiknyasa lesfregqkl dnvddtftvw
      121 ikrceetlna sqtdlnmqqp lppkikydwy qtesqvivti miknaqkddv svqflerkmn
      181 asvrlpsged fnlkldllhs ivpeqstfkv lstkveikmk kpeavrwekl egqgdspklk
      241 qftpdtqhly pssshytrnw dklvveikee ekneklegda alnklfqqiy sdgtdevkra
      301 mnksfmesgg tvlstnwsdv gkrkvevnpp ddvewkkf
//
LOCUS       XP_041322992             342 aa            linear   VRT 06-MAY-2021
DEFINITION  leukocyte cell-derived chemotaxin 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322992
VERSION     XP_041322992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="leukocyte cell-derived chemotaxin 1 isoform X1"
                     /calculated_mol_wt=38096
     Region          102..199
                     /region_name="BRICHOS"
                     /note="The BRICHOS domain is found in a variety of
                     proteins implicated in dementia, respiratory distress and
                     cancer; smart01039"
                     /db_xref="CDD:198107"
     CDS             1..342
                     /gene="CNMD"
                     /coded_by="XM_041467058.1:1..1029"
                     /db_xref="GeneID:121353312"
ORIGIN      
        1 maegsekvpi arvgpddvel clppayaaaa ppgpgrllka gaavliagal lllagaigaf
       61 yfwkaterqv ynvhytmsin gkvqdgsmei dagnnletfk tgsgseeave vhdfqigitg
      121 irfaegekcy ikaqpkahip evdamakasl sseledeimp vrfdknsliw vaadepikhn
      181 sflspkilel crdlpifwlr ptypkdnqrr emkrnkrqse pnfeedleaa seevnprslg
      241 qltqelghqa netrpmgqet dqtfnpdnpy nqqegegmaf dpmldhlgvc ciecrrsytq
      301 cqriceplmg yhpwpynyqg crtacriimp cswwvarimg vv
//
LOCUS       XP_041322993             341 aa            linear   VRT 06-MAY-2021
DEFINITION  leukocyte cell-derived chemotaxin 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322993
VERSION     XP_041322993.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467059.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="leukocyte cell-derived chemotaxin 1 isoform X2"
                     /calculated_mol_wt=37967
     Region          102..199
                     /region_name="BRICHOS"
                     /note="The BRICHOS domain is found in a variety of
                     proteins implicated in dementia, respiratory distress and
                     cancer; smart01039"
                     /db_xref="CDD:198107"
     CDS             1..341
                     /gene="CNMD"
                     /coded_by="XM_041467059.1:1..1026"
                     /db_xref="GeneID:121353312"
ORIGIN      
        1 maegsekvpi arvgpddvel clppayaaaa ppgpgrllka gaavliagal lllagaigaf
       61 yfwkaterqv ynvhytmsin gkvqdgsmei dagnnletfk tgsgseeave vhdfqigitg
      121 irfaegekcy ikaqpkahip evdamakasl sseledeimp vrfdknsliw vaadepikhn
      181 sflspkilel crdlpifwlr ptypkdnqrr emkrnkrqse pnfeedleaa seevnprslg
      241 qltqelghqa netrpmgqet dqtfnpdnpy nqegegmafd pmldhlgvcc iecrrsytqc
      301 qriceplmgy hpwpynyqgc rtacriimpc swwvarimgv v
//
LOCUS       XP_041322994             283 aa            linear   VRT 06-MAY-2021
DEFINITION  stomatin-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041322994
VERSION     XP_041322994.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467060.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="stomatin-like protein 3"
                     /calculated_mol_wt=30743
     Region          73..271
                     /region_name="SPFH_like"
                     /note="core domain of the SPFH (stomatin, prohibitin,
                     flotillin, and HflK/C) superfamily; cl19107"
                     /db_xref="CDD:473137"
     CDS             1..283
                     /gene="STOML3"
                     /coded_by="XM_041467060.1:1..852"
                     /db_xref="GeneID:121353313"
ORIGIN      
        1 mdpqterpkr mntehliadr qegigvcgwi lvslsfllvl itfpfsiwac ikvvreyera
       61 vvfrlgrils kkakgpgmil vlpftdtfik vdlrtvtcki ppqeiltrda vtaqvdgvvh
      121 yrihsavsav anvtdvhsat lllaqtalrn flgtqslaql ltgreeiahs iqaaldsate
      181 qwgvkvsrve ikdiripmam qramaaeaea aqekkakvva aegemnaska lqkasmvlae
      241 spaglplryl qtltavaaqn nstivfplpm nmfgslgqkr tgg
//
LOCUS       XP_041322995             812 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase Nek5 [Pyrgilauda ruficollis].
ACCESSION   XP_041322995
VERSION     XP_041322995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..812
                     /product="serine/threonine-protein kinase Nek5"
                     /calculated_mol_wt=94064
     Region          3..259
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(10..13,16,18,31,33,64,80..83,128,132..133,135,
                     146..147)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..812
                     /gene="NEK5"
                     /coded_by="XM_041467061.1:1..2439"
                     /db_xref="GeneID:121353314"
ORIGIN      
        1 mdkyelieqi gegsfgkifl akgkmddepc vikeinltkm pvkekeasek evillaqmkh
       61 anivtfyasl qeknklyivm eycdggdlmk rinmqhgvlf dedqilswfv qislglkhih
      121 dkkilhrdvk tqnvflsnng kvaklgdfgi arqmnsttef ahtcvgtpyy lspeicenrp
      181 ynnktdiwsl gcvlyelcal khpfqgnslh elvlkicrgr fqpvspnysy dlrilisqlf
      241 kisprdrpsi nsilrkpflq klvlrylppe aaweelshav vcrkrpsash srgkqiqayk
      301 lqktrvqdpf slesgivmpf kkqelfqrne wkppsrvqqp iiqpqtsrfn maerpgsirv
      361 hghyghyyek ldslqrkanv hydlshisqr vedyyelkgq iappppdwta eflqrrfeaq
      421 qykikvekqm glrpssadpy hdqiqqqktk eehlknhqqn tsrknemkeq eylkqlqkir
      481 eeyhndikef rvragvlqen qkiqdktylv rqgkaeqqse nkdisgtgek slqdmeenfk
      541 qvrlqdkedq tilekryntk ggvkfeinld vcfpeedsiq eaevldklne tltfvdgenl
      601 keklvevyen htdralekls dypkesihdm kkprkhwqpg apqtllnfla gadvtsacpt
      661 magnelahhv ilpedipenr kqwkqtppet llsilakael sddsficfee dkegrltllp
      721 peenkeddsk tysavdvdeg rleprsdged tnfedsedel rhqleeslek lstspaeesh
      781 ifsinksqtd eekmslphkl gesdddlenn hg
//
LOCUS       XP_041322996             196 aa            linear   VRT 06-MAY-2021
DEFINITION  SPRY domain-containing protein 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041322996
VERSION     XP_041322996.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467062.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..196
                     /product="SPRY domain-containing protein 7"
                     /calculated_mol_wt=21560
     Region          35..196
                     /region_name="SPRYD7"
                     /note="SPRY domain-containing protein 7; cd12880"
                     /db_xref="CDD:293938"
     CDS             1..196
                     /gene="SPRYD7"
                     /coded_by="XM_041467062.1:27..617"
                     /db_xref="GeneID:121353316"
ORIGIN      
        1 maasvfccfs wcrdggaghi plkempavhl dtqrmgtdvv ivkngrricg tggclanapl
       61 hqnksyfefk iqstgiwgig vatqkanlnq iplgrdvhsl virndgalyy nneeknrlpa
      121 nslpqegdvv gitydhveln vylngknmhc pasgirgtvy pvvyvddsai ldcqfsefyh
      181 tpppgfekil feqqif
//
LOCUS       XP_041322997             386 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein-sorting-associated protein 36 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041322997
VERSION     XP_041322997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467063.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..386
                     /product="vacuolar protein-sorting-associated protein 36"
                     /calculated_mol_wt=43422
     Region          1..128
                     /region_name="PH-GRAM-like_Eap45"
                     /note="Pleckstrin homology-like domain or GLUE (GRAM-like
                     ubiquitin-binding in Eap45) domain of Eap45; cd13226"
                     /db_xref="CDD:275408"
     Site            order(32,81,111)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:275408"
     Site            order(67..68,70,85..87,99,105)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:275408"
     Region          154..370
                     /region_name="EAP30"
                     /note="EAP30/Vps36 family; pfam04157"
                     /db_xref="CDD:461201"
     CDS             1..386
                     /gene="VPS36"
                     /coded_by="XM_041467063.1:26..1186"
                     /db_xref="GeneID:121353317"
ORIGIN      
        1 mdrfswttgl lelgetlviq qrgvrlsdge ekvkfdsgvl llsthrliwr dqknheccia
       61 vplsqivfie eqaagigksa kivvhlhpas snkepgpfqs skysyiklsf kehgqiefyr
      121 rlseeitqrr wesmptgqam qvnkdsqagr iravgivgie rkleekrket dkniseafed
      181 lsklmekake mvelsksian kikekqgdit edetirfksy llsmgianpv tretygsgtq
      241 yhmqlakqla gilqtpleer ggimsltevy clvnrargle llspedlvna ckmleslklp
      301 lrlrifdsgv mvielqshne eemvaaalet vsekgsltad efaklvgmsv llakerllla
      361 ekmghlcrdd sveglrfypn lfltqs
//
LOCUS       XP_041322998             264 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 122 [Pyrgilauda ruficollis].
ACCESSION   XP_041322998
VERSION     XP_041322998.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467064.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..264
                     /product="coiled-coil domain-containing protein 122"
                     /calculated_mol_wt=30983
     Region          17..>253
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..264
                     /gene="CCDC122"
                     /coded_by="XM_041467064.1:13..807"
                     /db_xref="GeneID:121353318"
ORIGIN      
        1 makqhspsla evvkrvaeqq qaqasdieks kavlcqlqak cqelekemns vlletktter
       61 eihlqddaie vtkchcenle aqvralysen lklrcdaeti qeefemilar nneyrekikd
      121 hkhlfwemes klpimielae kkvlveelka kkeelicdlq npegsvikqv qeeitllkse
      181 vttlkefink rrdlleeekk khaklrkeie vqnkrydail krlhcqlnkv hsnkrqwhwn
      241 iqqlekkaae lrkclgvael qnim
//
LOCUS       XP_041323000             317 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor ligand superfamily member 11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323000
VERSION     XP_041323000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..317
                     /product="tumor necrosis factor ligand superfamily member
                     11"
                     /calculated_mol_wt=35454
     Site            order(167,215,217,276,281,307,311)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238108"
     Region          186..313
                     /region_name="TNF"
                     /note="TNF(Tumour Necrosis Factor) family; pfam00229"
                     /db_xref="CDD:425540"
     Site            order(188..189,194,239,246,251)
                     /site_type="active"
                     /note="receptor binding sites [active]"
                     /db_xref="CDD:238108"
     CDS             1..317
                     /gene="TNFSF11"
                     /coded_by="XM_041467066.1:1..954"
                     /db_xref="GeneID:121353320"
ORIGIN      
        1 mrrasrdytk ylrgseelgs gaahesapap ppppppahph pppasrslla alvllglgqv
       61 vcsvalflyf raqmdptris kehahcvrtl fghqestdlh dasfesqeak lmpescrsvk
      121 qalqravqre vqramgrtpp rpekaameal glelykrskp ekqpfahlii ddknipsgtr
      181 kvnltswhhd kgqanlsnmt fndgklivnq dgfyylyani cfrhhetsgn ltkrglqlmv
      241 yviktnlkir rfdvlmkggs tkywsgnsef hfysvnvggf fklksgemis iqvsnpllld
      301 ssqeatyfga fkvrdld
//
LOCUS       XP_041323001             438 aa            linear   VRT 06-MAY-2021
DEFINITION  purine nucleoside phosphorylase LACC1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323001
VERSION     XP_041323001.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467067.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..438
                     /product="purine nucleoside phosphorylase LACC1 isoform
                     X1"
                     /calculated_mol_wt=48636
     Region          198..434
                     /region_name="Cu-oxidase_4"
                     /note="Multi-copper polyphenol oxidoreductase laccase;
                     pfam02578"
                     /db_xref="CDD:460601"
     CDS             1..438
                     /gene="LACC1"
                     /coded_by="XM_041467067.1:226..1542"
                     /db_xref="GeneID:121353321"
ORIGIN      
        1 mveavlidlf sltpdlqnnt qgllhntlea iekcssihap fvyvmccqrq gsekkgeqef
       61 llpalrgfqs lkrrlevvca qttaaalytv kqrldekdls iikvilptlr kdlmkiyidh
      121 lftavyqfef edlqvvpdse slqipehqhe ghtlpsqdra liqseiqmyl eslpslkgel
      181 iilrsslipd diflhgfttr tggisyiptl sscnlfsssk rrdpqvvvke nlrrlanaag
      241 fnpeafhrvk vdhanavcim gktepdnydg ivtnqkgvtl aapgadcipv lfadpvrrac
      301 gaahsgwkgt llgvsmatvn amvseyscnv kdilvvlgps vgpccyklph esakefhrid
      361 pncvrlfdsa spyvdirrat rillerggil peniqddsit dqnqnitfct achpdkfysh
      421 frdgtnfgtq igfisikd
//
LOCUS       XP_041323002             268 aa            linear   VRT 06-MAY-2021
DEFINITION  purine nucleoside phosphorylase LACC1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323002
VERSION     XP_041323002.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467068.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..268
                     /product="purine nucleoside phosphorylase LACC1 isoform
                     X2"
                     /calculated_mol_wt=29571
     Region          28..264
                     /region_name="Cu-oxidase_4"
                     /note="Multi-copper polyphenol oxidoreductase laccase;
                     pfam02578"
                     /db_xref="CDD:460601"
     CDS             1..268
                     /gene="LACC1"
                     /coded_by="XM_041467068.1:138..944"
                     /db_xref="GeneID:121353321"
ORIGIN      
        1 msvyfirwyl secnrivqly diflhgfttr tggisyiptl sscnlfsssk rrdpqvvvke
       61 nlrrlanaag fnpeafhrvk vdhanavcim gktepdnydg ivtnqkgvtl aapgadcipv
      121 lfadpvrrac gaahsgwkgt llgvsmatvn amvseyscnv kdilvvlgps vgpccyklph
      181 esakefhrid pncvrlfdsa spyvdirrat rillerggil peniqddsit dqnqnitfct
      241 achpdkfysh frdgtnfgtq igfisikd
//
LOCUS       XP_041323003             179 aa            linear   VRT 06-MAY-2021
DEFINITION  purine nucleoside phosphorylase LACC1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323003
VERSION     XP_041323003.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467069.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="purine nucleoside phosphorylase LACC1 isoform
                     X3"
                     /calculated_mol_wt=19378
     Region          <2..175
                     /region_name="Cu-oxidase_4"
                     /note="Multi-copper polyphenol oxidoreductase laccase;
                     pfam02578"
                     /db_xref="CDD:460601"
     CDS             1..179
                     /gene="LACC1"
                     /coded_by="XM_041467069.1:640..1179"
                     /db_xref="GeneID:121353321"
ORIGIN      
        1 mgktepdnyd givtnqkgvt laapgadcip vlfadpvrra cgaahsgwkg tllgvsmatv
       61 namvseyscn vkdilvvlgp svgpccyklp hesakefhri dpncvrlfds aspyvdirra
      121 trillerggi lpeniqddsi tdqnqnitfc tachpdkfys hfrdgtnfgt qigfisikd
//
LOCUS       XP_041323004             624 aa            linear   VRT 06-MAY-2021
DEFINITION  plastin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323004
VERSION     XP_041323004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467070.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="plastin-2"
                     /calculated_mol_wt=69571
     Region          14..76
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(23,25,27,34,59,61,63,70)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          95..239
                     /region_name="CH_PLS_rpt1"
                     /note="first calponin homology (CH) domain found in the
                     plastin family; cd21292"
                     /db_xref="CDD:409141"
     Site            order(119,123,186,188..189,192..193,195,204..212,217,
                     219..220,222..223,226..227,230)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409141"
     Region          248..372
                     /region_name="CH_PLS2_rpt2"
                     /note="second calponin homology (CH) domain found in
                     plastin-2; cd21327"
                     /db_xref="CDD:409176"
     Site            order(263,267,326,328..329,332..333,335,343..351,356,
                     358..359,361..362,365..366,369)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409176"
     Region          371..504
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(397,452,454..455,458..459,461,475..479,484,486..487,
                     489..490,493..494,497)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          508..622
                     /region_name="CH_PLS2_rpt4"
                     /note="fourth calponin homology (CH) domain found in
                     plastin-2; cd21333"
                     /db_xref="CDD:409182"
     Site            order(514,518,575,577..578,581..582,584,592..600,605,
                     607..608,610..611,614..615,618)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409182"
     CDS             1..624
                     /gene="LCP1"
                     /coded_by="XM_041467070.1:206..2080"
                     /db_xref="GeneID:121353322"
ORIGIN      
        1 mastahfsee emaelreafs kvdisgngfi dtndltevlk aanlplpgyk areliqsltt
       61 tgngrisfde fisifqdlks ddvaksfrkq inkkegicai ggtseqssag tqhsyseeek
      121 yafvnwinka lekdpdckhv vpmnpetddl fqavgdgivl ckminfsvpd tiderainkk
      181 kltpftiqen lnlalnsasa igchvvniga edlkegkpyl vlgllwqvik iglfadieis
      241 rnealiallr egesledlmk lspedlllrw anyhlenagc nkvnnfssdi kdsrayyhll
      301 nqvapkgdee gipaitidms glrekddvqr aecmlqqaer lgcrqfvtat dvvrgnpkln
      361 lafianlfnk ypalhkpenq didwgsiege treertfrnw mnslgvnprv nhlysdlsda
      421 lvifqlyeki kvpvdwnrvn kppypklggn mkklencnya velgknqakf slvgiagqdl
      481 negnrtltla liwqlmrryt lnilediggg ekvndeiivs wvnetltaag kdstissfkd
      541 skistsmpvl dlidaiqpgs ikydllkted lndeeklnna kyaismarki garvyalped
      601 lvevkpkmvm tvfaclmgkg mkkv
//
LOCUS       XP_041323005             542 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM124A [Pyrgilauda ruficollis].
ACCESSION   XP_041323005
VERSION     XP_041323005.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467071.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..542
                     /product="protein FAM124A"
                     /calculated_mol_wt=60885
     Region          44..277
                     /region_name="FAM124"
                     /note="FAM124 family; pfam15067"
                     /db_xref="CDD:464482"
     CDS             1..542
                     /gene="FAM124A"
                     /coded_by="XM_041467071.1:1..1629"
                     /db_xref="GeneID:121353323"
ORIGIN      
        1 mekqpggeee cadsgaetgg seysrmssts selsvegiqd pflvsvhivt dpgesktlqq
       61 aidkllawih pdlqlfrvse rrvprkrrkp lkagvaqpal avilflqeey geepilqlhe
      121 tfqrppwhyh htelmhgkfl pylpcsqdfy tlapetplwa irpvhygkem irftiycrne
      181 nfvdilklye lilkrpvcqk kadfcvfpvy snmeidiqfs lkklpkgqvp vrtesavlef
      241 rvkdvgqlvp llpnpcspis egrwqtedhd gnrillqqah swcrksakqn kqpypsvstd
      301 shfttlpgfl pqshqsvseq pqemgqkkeh htnglghylg fsqqdlrhsd lgdftcrsrs
      361 assiswsfqr skslfclptv nsssasetfh fsepfqflnt gspatrlktw kcspklnidd
      421 ledaqetnvd tgmklsfsdl svvsaysaln gfcseledsl psqkqtlsra kqaatsgrpl
      481 samcntfesv dgslpslsew ssssftsasl seqhkqplra apcslddrvc laspvneeef
      541 yi
//
LOCUS       XP_041323006             242 aa            linear   VRT 06-MAY-2021
DEFINITION  seven in absentia homolog 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323006
VERSION     XP_041323006.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467072.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="seven in absentia homolog 3"
                     /calculated_mol_wt=27021
     Region          106..232
                     /region_name="Sina"
                     /note="Seven in absentia (Sina) protein family, C-terminal
                     substrate binding domain; composed of the Drosophila Sina
                     protein, the mammalian Sina homolog (Siah), the plant
                     protein SINAT5, and similar proteins. Sina, Siah and
                     SINAT5 are RING-containing proteins...; cd03829"
                     /db_xref="CDD:239753"
     Site            order(113..115,117,119,128..129)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:239753"
     Site            order(170,182..188,190,205..206,213,217)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239753"
     CDS             1..242
                     /gene="SIAH3"
                     /coded_by="XM_041467072.1:1..729"
                     /db_xref="GeneID:121353324"
ORIGIN      
        1 mlfftqcfga vldlihlrfq hykakrvfsa agqlvcvvnp thslkyaptr caavqasteq
       61 gilppchhhe avhdpqlvpc tcplfscpwe ghlevvvshl rqthrinilq gaeivflatd
      121 mhlpaptdwi imhsclghqf llvlrkqeky eghpqffatm mligtptqan nftyrlelnr
      181 nqrrlkweat prsilecvds visdgdclvl ntslaqlfsd ngslaigiai ttskvhssea
      241 em
//
LOCUS       XP_041323007             398 aa            linear   VRT 06-MAY-2021
DEFINITION  serpin E3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323007
VERSION     XP_041323007.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467073.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="serpin E3"
                     /calculated_mol_wt=43694
     Region          19..397
                     /region_name="serpinE3"
                     /note="serpin family E member 3; cd19574"
                     /db_xref="CDD:381040"
     Site            350..375
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381040"
     CDS             1..398
                     /gene="SERPINE3"
                     /coded_by="XM_041467073.1:1..1197"
                     /db_xref="GeneID:121353326"
ORIGIN      
        1 mlpilfsafi lsaccmskgn cisydelrel ktefaislyr qvseaenrtn lvvspasvav
       61 slellqfgaq gntftelqda lgynihdqsv qdfmhtvdea vadssqgtvi qlgcsllvda
      121 gvqlspdfae raarcanssl lqtnltdpni thiqegittd ladgdmrgmt lespapslsq
      181 vtlvstlyfr smwqkkfsfm dsqmlpfttp egstlkvptm hhtaevnygq fqtaaleafs
      241 vvelpylgek lsmflvlpsh krtplsqves hlsaktitlw anslkrtkmd iflprfsiqs
      301 lfdlktvlsa lgirdafdpi tanfkgiseq dslyiseaih kaeievtedg tkasgatamv
      361 llkrsrtpif kadrpftffl rqantgsvlf igrvtnps
//
LOCUS       XP_041323008             272 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323008
VERSION     XP_041323008.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467074.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..272
                     /product="mediator of RNA polymerase II transcription
                     subunit 4"
                     /calculated_mol_wt=29246
     Region          66..>191
                     /region_name="Med4"
                     /note="Vitamin-D-receptor interacting Mediator subunit 4;
                     pfam10018"
                     /db_xref="CDD:401849"
     CDS             1..272
                     /gene="MED4"
                     /coded_by="XM_041467074.1:29..847"
                     /db_xref="GeneID:121353327"
ORIGIN      
        1 maaaaagaga gagaaaaagg gggersstrd rllaaledle llarelieil aisrnqklpq
       61 pgeesqilel liqrdgefqe lmklavdqgk ihhemqllek vvekrdndiq qlqkqlkeae
      121 hilatavyqa keklksieka rkgaisseei ikyahrisas navcapltwv pgdprrpypt
      181 dlemrsgllg qmnnpstngv nghlpgdala agrlpdvlap qypwqssdms mnmlppnhsn
      241 dfmleppghn keneddvevm stdssssssd sd
//
LOCUS       XP_041323010             313 aa            linear   VRT 06-MAY-2021
DEFINITION  ribonuclease H2 subunit B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323010
VERSION     XP_041323010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="ribonuclease H2 subunit B isoform X1"
                     /calculated_mol_wt=35050
     Region          23..306
                     /region_name="RNase_H2-B"
                     /note="Ribonuclease H2-B is a subunit of the eukaryotic
                     RNase H complex which cleaves RNA-DNA hybrids; cd09270"
                     /db_xref="CDD:187751"
     Site            order(25..27,45,69,77..81)
                     /site_type="other"
                     /note="heterotrimeric interface"
                     /db_xref="CDD:187751"
     CDS             1..313
                     /gene="RNASEH2B"
                     /coded_by="XM_041467076.1:47..988"
                     /db_xref="GeneID:121353329"
ORIGIN      
        1 mrgarsgqga errpagappa qwvliapeaa idppktpdse plftklrnps tgeatlylfn
       61 sgaqqlfevk afheecrswf igqtvqqdgr llfvtpmdpl flilyylika dkeqqgkfqp
      121 ldqvvldsey pscplllkca dvkqyiqhvt eekeigsqkf hkyseektlk wlkkkvnqtv
      181 kalksnnisv gervlasaci nskqitdaqe dyvryahgli seyipedlsk ellkylglpe
      241 lrspapeppa kkrklsdvpv epqedytkfn sdnlktkkan tkmsaaqkal akvdksgmks
      301 istffsskpk tsk
//
LOCUS       XP_041323011             312 aa            linear   VRT 06-MAY-2021
DEFINITION  ribonuclease H2 subunit B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323011
VERSION     XP_041323011.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467077.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="ribonuclease H2 subunit B isoform X2"
                     /calculated_mol_wt=34922
     Region          23..305
                     /region_name="RNase_H2-B"
                     /note="Ribonuclease H2-B is a subunit of the eukaryotic
                     RNase H complex which cleaves RNA-DNA hybrids; cd09270"
                     /db_xref="CDD:187751"
     Site            order(25..27,45,69,77..81)
                     /site_type="other"
                     /note="heterotrimeric interface"
                     /db_xref="CDD:187751"
     CDS             1..312
                     /gene="RNASEH2B"
                     /coded_by="XM_041467077.1:47..985"
                     /db_xref="GeneID:121353329"
ORIGIN      
        1 mrgarsgqga errpagappa qwvliapeaa idppktpdse plftklrnps tgeatlylfn
       61 sgaqqlfevk afheecrswf igqtvqqdgr llfvtpmdpl flilyylika dkeqgkfqpl
      121 dqvvldseyp scplllkcad vkqyiqhvte ekeigsqkfh kyseektlkw lkkkvnqtvk
      181 alksnnisvg ervlasacin skqitdaqed yvryahglis eyipedlske llkylglpel
      241 rspapeppak krklsdvpve pqedytkfns dnlktkkant kmsaaqkala kvdksgmksi
      301 stffsskpkt sk
//
LOCUS       XP_041323012             279 aa            linear   VRT 06-MAY-2021
DEFINITION  ribonuclease H2 subunit B isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323012
VERSION     XP_041323012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..279
                     /product="ribonuclease H2 subunit B isoform X3"
                     /calculated_mol_wt=31352
     Region          23..209
                     /region_name="RNase_H2-B"
                     /note="Ribonuclease H2-B is a subunit of the eukaryotic
                     RNase H complex which cleaves RNA-DNA hybrids; cd09270"
                     /db_xref="CDD:187751"
     Site            order(25..27,45,69,77..81)
                     /site_type="other"
                     /note="heterotrimeric interface"
                     /db_xref="CDD:187751"
     CDS             1..279
                     /gene="RNASEH2B"
                     /coded_by="XM_041467078.1:47..886"
                     /db_xref="GeneID:121353329"
ORIGIN      
        1 mrgarsgqga errpagappa qwvliapeaa idppktpdse plftklrnps tgeatlylfn
       61 sgaqqlfevk afheecrswf igqtvqqdgr llfvtpmdpl flilyylika dkeqqgkfqp
      121 ldqvvldsey pscplllkca dvkqyiqhvt eekeigsqkf hkyseektlk wlkkkvnqtv
      181 kalksnnisv gervlasaci nskqitdaqe dyvryahgli seyipedlsk ellkylglpe
      241 lrspapeppa kilqlisspv lvlwlrfkak alnfhvcts
//
LOCUS       XP_041323013             261 aa            linear   VRT 06-MAY-2021
DEFINITION  ribonuclease H2 subunit B isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323013
VERSION     XP_041323013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="ribonuclease H2 subunit B isoform X4"
                     /calculated_mol_wt=29373
     Region          23..209
                     /region_name="RNase_H2-B"
                     /note="Ribonuclease H2-B is a subunit of the eukaryotic
                     RNase H complex which cleaves RNA-DNA hybrids; cd09270"
                     /db_xref="CDD:187751"
     Site            order(25..27,45,69,77..81)
                     /site_type="other"
                     /note="heterotrimeric interface"
                     /db_xref="CDD:187751"
     CDS             1..261
                     /gene="RNASEH2B"
                     /coded_by="XM_041467079.1:47..832"
                     /db_xref="GeneID:121353329"
ORIGIN      
        1 mrgarsgqga errpagappa qwvliapeaa idppktpdse plftklrnps tgeatlylfn
       61 sgaqqlfevk afheecrswf igqtvqqdgr llfvtpmdpl flilyylika dkeqqgkfqp
      121 ldqvvldsey pscplllkca dvkqyiqhvt eekeigsqkf hkyseektlk wlkkkvnqtv
      181 kalksnnisv gervlasaci nskqitdaqe dyvryahgli seyipedlsk ellkylglpe
      241 lrspapeppa kmpekrcakk k
//
LOCUS       XP_041323014             490 aa            linear   VRT 06-MAY-2021
DEFINITION  GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323014
VERSION     XP_041323014.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467080.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="GDP-Man:Man(3)GlcNAc(2)-PP-Dol
                     alpha-1,2-mannosyltransferase"
                     /calculated_mol_wt=55002
     Region          61..479
                     /region_name="GT4_ALG11-like"
                     /note="alpha-1,2-mannosyltransferase ALG11 and similar
                     proteins; cd03806"
                     /db_xref="CDD:340835"
     CDS             1..490
                     /gene="ALG11"
                     /coded_by="XM_041467080.1:171..1643"
                     /db_xref="GeneID:121353330"
ORIGIN      
        1 mvagglclcg llrllcslll palflsgilc iclvvllwgv rlwiqrkkql ssagrdgkrp
       61 llvaffhpyc naggggervl wcairtlqkk yrnvtcvvyt gdrdatgeei vegafrrfni
      121 klihpvkfvf lekrflveas lyphftllgq slgslflgwe allkcapdiy idsmgyafti
      181 plfkyvggcr vgcyvhypti stdmlsvvrn qdtrfnnaaf itssplfskf klvyyyffaf
      241 myglvgscsd vvmvnsswtl nhilslwrag actsvvyppc dvqafldipl evekstseys
      301 ivsvsqfrpe kdhplqiraf akllkekrvg qqpslklili ggcrnqqdee rvnnlkrlce
      361 elgvgddvvf rinipfeelk rhlaeatigl htmwnehfgi gvvecmaagt vilahnsggp
      421 kldivvpheg cvtgflaede dsyaetmayi fslspekrlg irenarrsvh rfsdqhfedt
      481 fllsveplfk
//
LOCUS       XP_041323015            1010 aa            linear   VRT 06-MAY-2021
DEFINITION  short transient receptor potential channel 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323015
VERSION     XP_041323015.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467081.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1010
                     /product="short transient receptor potential channel 4"
                     /calculated_mol_wt=115729
     Region          17..749
                     /region_name="trp"
                     /note="transient-receptor-potential calcium channel
                     protein; TIGR00870"
                     /db_xref="CDD:273311"
     Region          122..167
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..1010
                     /gene="TRPC4"
                     /coded_by="XM_041467081.1:368..3400"
                     /db_xref="GeneID:121353331"
ORIGIN      
        1 maqfyykrsv napyrdripl rivraesels hsekaylnav ekgdyasvkk aleeaeiyfk
       61 inincidplg rtalliaien enlelielll sfnvyvgdal lhairkevvg avelllnhkk
      121 psgekqvppv lldkqfseft pditpiilaa htnnyeiikl lvqkgvsvpr phevrcncve
      181 cvsssdvdsl rhsrsrlniy kalaspslia lssedpflta fqlswelqel skvenefkse
      241 yeelsrqckq fakdlldqtr ssreleiiln yrddnsliee qsgndlarlk laikyrqkef
      301 vaqpncqqll asrwydefpg wrrrhwavkm ltcvvigllf pvfsvcylia pksplglfir
      361 kpfikficht asyltflfll llasqhidrs dlsmqgpppt ivewmilpwv lgfiwgeikq
      421 mwdgglqdyi hdwwnlmdfv mnslylatis lkivafskys glvpreswdm whptlvaeal
      481 faianifssl rlislftans hlgplqislg rmlldilkfl fiyclvllaf anglnqlyfy
      541 yetnepgnck gircekqnna fstlfetlqs lfwsifglin lyvtnvkarh eftefvgatm
      601 fgtynvislv vllnmliamm nnsyqliadh adiewkfart klwmsyfeeg gtlptpfnvi
      661 pspkslwyli kwlwrhlckk kirrkpesfg tigrraadnl rrhhqyqevm rnlvkryvaa
      721 mirdakteeg lteenfkelk qdissfrfev lgllkgskls nlqtgkmskd taslseneen
      781 sesegntkgk kkpfslfdit tmihprsani aseghnvsng sammvsestq ekqkrvnfvt
      841 diknfglfhr rsktnsvgqs tnkiytvsee vsrqqaeeqc ektdeleege limncelnfr
      901 npgkkcmlde sqntseslds qeggsicpse tekmelqnse patpqdqldk aldisidsdg
      961 kqetivqgdy vitskrsvtv lipllemhlq vlktvemilm ekkylrltqn
//
LOCUS       XP_041323016             623 aa            linear   VRT 06-MAY-2021
DEFINITION  ecto-NOX disulfide-thiol exchanger 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323016
VERSION     XP_041323016.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467082.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="ecto-NOX disulfide-thiol exchanger 1"
                     /calculated_mol_wt=70768
     Region          116..199
                     /region_name="RRM_ENOX"
                     /note="RNA recognition motif (RRM) found in the cell
                     surface Ecto-NOX disulfide-thiol exchanger (ECTO-NOX or
                     ENOX) proteins; cd12228"
                     /db_xref="CDD:409675"
     Region          <293..>522
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..623
                     /gene="ENOX1"
                     /coded_by="XM_041467082.1:444..2315"
                     /db_xref="GeneID:121353332"
ORIGIN      
        1 maaaadglgs iaidttqlnm svtdptawat amnnlgmvpv glagqqlvtd sicvpgfdps
       61 lsmmtgitpi npmipgmglv ppppptdvpv vkeiihcksc tlfppnpnlp ppstrerppg
      121 cktvfvgglp enateeiiqe vfeqcgdita irkskknfch irfaeefmvd kaiylsgyrm
      181 rlgsstdkkd sgrlhvdfaq arddfyewec kqrmlareer hrrkmeedrl rppsppaimh
      241 yseheaalla eklkddskfs eaitvlltwi ergevnrrsa nqfysmvqsa nshvrrlmne
      301 kaaheqemeq akesfknalt giltqfeqiv avfnastrqk awdhfskaqr knidiwrkhs
      361 eelrnahseq lmgirreeem emsdddsgdn pskklrvdds alaaqayalk eendslrwql
      421 dayrnevell kqekgqlfrt eesltkdqql qflqqtmqgm qqqllsiqee lnnkkseleq
      481 akeeqthtqa mlkvlqeqlk sakelaeing hdesqanein vltvalvnqd reknsekrsp
      541 glksekeall igiistflhv hpfganieyl wsymqqldsr isaneiemll mrlprmfkqe
      601 ftgvgatlek rwkfcafegi kti
//
LOCUS       XP_041323017             623 aa            linear   VRT 06-MAY-2021
DEFINITION  ecto-NOX disulfide-thiol exchanger 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323017
VERSION     XP_041323017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="ecto-NOX disulfide-thiol exchanger 1"
                     /calculated_mol_wt=70768
     Region          116..199
                     /region_name="RRM_ENOX"
                     /note="RNA recognition motif (RRM) found in the cell
                     surface Ecto-NOX disulfide-thiol exchanger (ECTO-NOX or
                     ENOX) proteins; cd12228"
                     /db_xref="CDD:409675"
     Region          <293..>522
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..623
                     /gene="ENOX1"
                     /coded_by="XM_041467083.1:450..2321"
                     /db_xref="GeneID:121353332"
ORIGIN      
        1 maaaadglgs iaidttqlnm svtdptawat amnnlgmvpv glagqqlvtd sicvpgfdps
       61 lsmmtgitpi npmipgmglv ppppptdvpv vkeiihcksc tlfppnpnlp ppstrerppg
      121 cktvfvgglp enateeiiqe vfeqcgdita irkskknfch irfaeefmvd kaiylsgyrm
      181 rlgsstdkkd sgrlhvdfaq arddfyewec kqrmlareer hrrkmeedrl rppsppaimh
      241 yseheaalla eklkddskfs eaitvlltwi ergevnrrsa nqfysmvqsa nshvrrlmne
      301 kaaheqemeq akesfknalt giltqfeqiv avfnastrqk awdhfskaqr knidiwrkhs
      361 eelrnahseq lmgirreeem emsdddsgdn pskklrvdds alaaqayalk eendslrwql
      421 dayrnevell kqekgqlfrt eesltkdqql qflqqtmqgm qqqllsiqee lnnkkseleq
      481 akeeqthtqa mlkvlqeqlk sakelaeing hdesqanein vltvalvnqd reknsekrsp
      541 glksekeall igiistflhv hpfganieyl wsymqqldsr isaneiemll mrlprmfkqe
      601 ftgvgatlek rwkfcafegi kti
//
LOCUS       XP_041323018             623 aa            linear   VRT 06-MAY-2021
DEFINITION  ecto-NOX disulfide-thiol exchanger 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323018
VERSION     XP_041323018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="ecto-NOX disulfide-thiol exchanger 1"
                     /calculated_mol_wt=70768
     Region          116..199
                     /region_name="RRM_ENOX"
                     /note="RNA recognition motif (RRM) found in the cell
                     surface Ecto-NOX disulfide-thiol exchanger (ECTO-NOX or
                     ENOX) proteins; cd12228"
                     /db_xref="CDD:409675"
     Region          <293..>522
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..623
                     /gene="ENOX1"
                     /coded_by="XM_041467084.1:333..2204"
                     /db_xref="GeneID:121353332"
ORIGIN      
        1 maaaadglgs iaidttqlnm svtdptawat amnnlgmvpv glagqqlvtd sicvpgfdps
       61 lsmmtgitpi npmipgmglv ppppptdvpv vkeiihcksc tlfppnpnlp ppstrerppg
      121 cktvfvgglp enateeiiqe vfeqcgdita irkskknfch irfaeefmvd kaiylsgyrm
      181 rlgsstdkkd sgrlhvdfaq arddfyewec kqrmlareer hrrkmeedrl rppsppaimh
      241 yseheaalla eklkddskfs eaitvlltwi ergevnrrsa nqfysmvqsa nshvrrlmne
      301 kaaheqemeq akesfknalt giltqfeqiv avfnastrqk awdhfskaqr knidiwrkhs
      361 eelrnahseq lmgirreeem emsdddsgdn pskklrvdds alaaqayalk eendslrwql
      421 dayrnevell kqekgqlfrt eesltkdqql qflqqtmqgm qqqllsiqee lnnkkseleq
      481 akeeqthtqa mlkvlqeqlk sakelaeing hdesqanein vltvalvnqd reknsekrsp
      541 glksekeall igiistflhv hpfganieyl wsymqqldsr isaneiemll mrlprmfkqe
      601 ftgvgatlek rwkfcafegi kti
//
LOCUS       XP_041323019             303 aa            linear   VRT 06-MAY-2021
DEFINITION  kidney mitochondrial carrier protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323019
VERSION     XP_041323019.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467085.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="kidney mitochondrial carrier protein 1 isoform
                     X1"
                     /calculated_mol_wt=33915
     Region          21..301
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..303
                     /gene="SLC25A30"
                     /coded_by="XM_041467085.1:171..1082"
                     /db_xref="GeneID:121353334"
ORIGIN      
        1 mgrnywmkee pimpalnwkp fiygglasit aecgtfpidl tktrlqvqgq vndakykeir
       61 yrgmlhalvr icreeglkal ysgiapamlr qasygtikig tyqslkrmfv ehpedetlmm
      121 nvlcgvlsgv isssianptd vlkirmqaqg rtiqggmmgn fieiyqkegt kglwkgvslt
      181 aqraaivvgv elpvydltkk hiimsghmgd tvythflssf lcglagalas npvdvvrtrm
      241 mnqksqnhgg hsaykgtldc llqtwknegf falykgfwpn wlrlgpwnii ffltyeqlkk
      301 lda
//
LOCUS       XP_041323020             291 aa            linear   VRT 06-MAY-2021
DEFINITION  kidney mitochondrial carrier protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323020
VERSION     XP_041323020.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467086.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="kidney mitochondrial carrier protein 1 isoform
                     X2"
                     /calculated_mol_wt=32379
     Region          9..289
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..291
                     /gene="SLC25A30"
                     /coded_by="XM_041467086.1:85..960"
                     /db_xref="GeneID:121353334"
ORIGIN      
        1 mpalnwkpfi ygglasitae cgtfpidltk trlqvqgqvn dakykeiryr gmlhalvric
       61 reeglkalys giapamlrqa sygtikigty qslkrmfveh pedetlmmnv lcgvlsgvis
      121 ssianptdvl kirmqaqgrt iqggmmgnfi eiyqkegtkg lwkgvsltaq raaivvgvel
      181 pvydltkkhi imsghmgdtv ythflssflc glagalasnp vdvvrtrmmn qksqnhgghs
      241 aykgtldcll qtwknegffa lykgfwpnwl rlgpwniiff ltyeqlkkld a
//
LOCUS       XP_041323021             327 aa            linear   VRT 06-MAY-2021
DEFINITION  protein chibby homolog 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323021
VERSION     XP_041323021.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467087.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="protein chibby homolog 2"
                     /calculated_mol_wt=37571
     Region          1..91
                     /region_name="Cby_like"
                     /note="Chibby, a nuclear inhibitor of Wnt/beta-catenin
                     mediated transcription, and similar proteins; cl12007"
                     /db_xref="CDD:472255"
     CDS             1..327
                     /gene="CBY2"
                     /coded_by="XM_041467087.1:1..984"
                     /db_xref="GeneID:121353335"
ORIGIN      
        1 msafdqrkqs trhtepetdc itprvkprge mfvfidgkwv ndiycqppfs shqklfskka
       61 qnewsiween ralcqenqvl wvknrmlwee nkalqylqsq nksvqviytd avqrslknkn
      121 kpfplfqerg tgfqlslgnk alqaiqennk ifedfqqenk alpvtwkgqk astvheeskd
      181 assdlqkntd titavekgnp gpvpqqkheg krksptptqn ktesapsmpa eheilqvlhd
      241 lrellhtflk mnhppgekqc chhlynvnrs fqedynklkl qlnavkntvs ditaqmdmle
      301 keiiaitspt yeeagqklat ehqlgdm
//
LOCUS       XP_041323023             476 aa            linear   VRT 06-MAY-2021
DEFINITION  mothers against decapentaplegic homolog 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323023
VERSION     XP_041323023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="mothers against decapentaplegic homolog 9"
                     /calculated_mol_wt=53395
     Region          13..136
                     /region_name="MH1_SMAD_1_5_9"
                     /note="N-terminal Mad Homology 1 (MH1) domain in SMAD1,
                     SMAD5 and SMAD9 (also known as SMAD8); cd10490"
                     /db_xref="CDD:199814"
     Site            order(36,40,74..75,78..82,85,104)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199814"
     Site            order(68,113,125,130)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:199814"
     Region          276..476
                     /region_name="MH2_SMAD_1_5_9"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD1,
                     SMAD5 and SMAD9; cd10497"
                     /db_xref="CDD:199822"
     Site            order(280,291,296..297,299,310..314,319,323..324,326,
                     328..329,335..336,338..340,343,362,412,415,418,422,424,
                     428..430,435,437,441,446,448,450,452,455..456,458..459,
                     462..463,467..470,472..476)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:199822"
     CDS             1..476
                     /gene="SMAD9"
                     /coded_by="XM_041467089.1:326..1756"
                     /db_xref="GeneID:121353337"
ORIGIN      
        1 mhsntpissl fsftspavkr llgwkqgdee ekwaekavds lvkklkkkkg ameelerals
       61 cpgqpskcvt iprsldgrlq vshrkglphv iycrvwrwpd lqshhelkpl eccefpfgsk
      121 qkevcinpyh yrrvetpvlp pvlvprhsef nphlsllakf rntslhsepl mphnatypds
      181 fqhppctpfp sspshmfsqs pnsisypnsp esssgpgspy qltvetpppp yhareppgih
      241 ngrsmdaiae sqlvlslpng gksadgeaen frpvcyeepq hwcsvayyel nnrvgetfqa
      301 ssrsilidgf tdpsnnknrf clgllsnvnr nstientrrh igkgvhlyyv ggevyaecvs
      361 dssifvqsrn cnyqhgfhpa tvckipsgcs lkifnnqlfa qllaqsvnhg fevvyeltkm
      421 ctirmsfvkg wgaeyhrqdv tstpcwieih lhgplqwldk vltqmgsphn pissvs
//
LOCUS       XP_041323024             463 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323024
VERSION     XP_041323024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="succinate--CoA ligase [ADP-forming] subunit
                     beta, mitochondrial"
                     /calculated_mol_wt=49710
     Region          55..443
                     /region_name="SucC"
                     /note="Succinyl-CoA synthetase, beta subunit [Energy
                     production and conversion]; COG0045"
                     /db_xref="CDD:439815"
     CDS             1..463
                     /gene="SUCLA2"
                     /coded_by="XM_041467090.1:70..1461"
                     /db_xref="GeneID:121353338"
ORIGIN      
        1 maasmicsrv aaglrgsglr aslgstagkv lagspgilnn hgfqvqqqqq rrlslheyls
       61 mgllkeagis vphgvvantp deaykiakei gskdlvvkaq vlaggrgkgt fegglkggvk
      121 ivfspeeaka vssqmigkkl ftkqtgekgr icnqvficer ryprreyyfa itmersfqgp
      181 vligssqggv niedvaaenp daiikepidi vegikkeqav rlaqkmgfpp nlvdeaaenm
      241 iklynlflky datmieinpm vedasgvvmc mdakinfdsn sayrqkkifd lqdwtqedqr
      301 dkdaakadln yigldgnigc lvngaglama tmdiiklhgg tpanfldvgg gataqqvtea
      361 fklitsdkkv lailvnifgg imrcdviaqg ivtavkdlel kvpivvrlqg trvddakali
      421 tasglkilac ddldeaakmv vklseivnla kqahvdvkfq lpi
//
LOCUS       XP_041323025             292 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleotide triphosphate diphosphatase NUDT15 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323025
VERSION     XP_041323025.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467091.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..292
                     /product="nucleotide triphosphate diphosphatase NUDT15"
                     /calculated_mol_wt=31647
     Region          155..269
                     /region_name="NUDIX_MTH2_Nudt15"
                     /note="MutT homolog 2; cd04678"
                     /db_xref="CDD:467561"
     CDS             1..292
                     /gene="NUDT15"
                     /coded_by="XM_041467091.1:522..1400"
                     /db_xref="GeneID:121353339"
ORIGIN      
        1 metrripskt gdggaenegk rnhagktchk qeqrlrraah qscpslaqtp flfpvtsqve
       61 rqgrqaigrt ghlsvpsppw spatllaahv tatrisrapd tpppraaktr dpeprladpp
      121 pparapgaam geqaaeprrp gvgvgvvvts aahpdcvllg krkgalgagt yqlpgghlef
      181 geslaecaar etleeaalpl rhvrfasavn avcasqryhy vtvlmkgeae pgaeprnqep
      241 dknegwewvk wnefppadql fwalrclreq gynpfteeld hlkgytgshq le
//
LOCUS       XP_041323026             201 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 11 [Pyrgilauda ruficollis].
ACCESSION   XP_041323026
VERSION     XP_041323026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="ADP-ribosylation factor-like protein 11"
                     /calculated_mol_wt=21449
     Region          15..167
                     /region_name="Arf_Arl"
                     /note="ADP-ribosylation factor(Arf)/Arf-like (Arl) small
                     GTPases; cd00878"
                     /db_xref="CDD:206644"
     Site            20..27
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206644"
     Site            order(22..28,43..44,67,123..124,126,156..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206644"
     Site            order(22..23,27,31,39..50,73,78)
                     /site_type="other"
                     /note="GAP interaction site [polypeptide binding]"
                     /db_xref="CDD:206644"
     Site            order(32..35,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206644"
     Site            order(34..35,45..52,63,74,77..78)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206644"
     Site            order(44..48,53,64,68,74,76..78)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206644"
     Site            44
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206644"
     Site            order(47..54,58..63)
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206644"
     Site            order(64..69,74..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206644"
     Site            64..67
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206644"
     Site            123..126
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206644"
     Site            156..158
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206644"
     CDS             1..201
                     /gene="ARL11"
                     /coded_by="XM_041467092.1:417..1022"
                     /db_xref="GeneID:121353340"
ORIGIN      
        1 mgkliskgwr krdarvimlg ldfagkstll yklksgqave tcptvgfnve alktpcgvsf
       61 tlwdvggqds lraswpnyle dintlifvld stdmarlaea maaleealsh pgmagvpvll
      121 lankqdapga lapaelgeml rlgglarhrw mlrgcsahtg rglqevlail gmllrgsehs
      181 slsqvqpvtg laergqdpeq t
//
LOCUS       XP_041323027             200 aa            linear   VRT 06-MAY-2021
DEFINITION  LHFPL tetraspan subfamily member 6 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041323027
VERSION     XP_041323027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="LHFPL tetraspan subfamily member 6 protein"
                     /calculated_mol_wt=21396
     Region          9..193
                     /region_name="L_HMGIC_fpl"
                     /note="Lipoma HMGIC fusion partner-like protein;
                     pfam10242"
                     /db_xref="CDD:463019"
     CDS             1..200
                     /gene="LHFPL6"
                     /coded_by="XM_041467093.1:440..1042"
                     /db_xref="GeneID:121353341"
ORIGIN      
        1 massltcagi vwaflsflca aascvgffmp ywllgsqlek svsfgtfrrc sypvrdesrq
       61 mtvmveqcgr yasfqaipsa ewrictvvtg lgcgllllva ltalmgccvs elisrtvgrv
      121 aggiqflggl ligsgcalyp lgwdseevrq tcgnlsnqfe lgtchigway yctgggaaaa
      181 mlvctwlacf sgkkqkqypy
//
LOCUS       XP_041323028             187 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 272 [Pyrgilauda ruficollis].
ACCESSION   XP_041323028
VERSION     XP_041323028.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467094.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..187
                     /product="transmembrane protein 272"
                     /calculated_mol_wt=21435
     CDS             1..187
                     /gene="TMEM272"
                     /coded_by="XM_041467094.1:1..564"
                     /db_xref="GeneID:121353344"
ORIGIN      
        1 maaglekach rciskiasnv cfifgllafl alplsmtfig mkfledcpvq pliplyllvg
       61 gvigslkvtl llydstrmrq llsksvvidd ddddeypwrq nahkyyvhlt lslflflwfi
      121 lgnywvfsvy lpnfippfhq pqdycdktly ifavgvliis htvlfllifc scciycfsrq
      181 rftseed
//
LOCUS       XP_041323029             865 aa            linear   VRT 06-MAY-2021
DEFINITION  N-alpha-acetyltransferase 16, NatA auxiliary subunit isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323029
VERSION     XP_041323029.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467095.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..865
                     /product="N-alpha-acetyltransferase 16, NatA auxiliary
                     subunit isoform X1"
                     /calculated_mol_wt=101144
     Region          13..38
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          44..282
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          47..74
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          82..108
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(84..85,88..89,91,115,118..119,122..123,125..126,149,
                     152..153,156..157,160)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          113..143
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          148..173
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          187..698
                     /region_name="NatA_aux_su"
                     /note="N-terminal acetyltransferase A, auxiliary subunit;
                     pfam12569"
                     /db_xref="CDD:463630"
     Region          376..402
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(378..379,382..383,385,409,412..413,416..417,
                     419..420,443,446..447,450..451,454)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          407..437
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          442..467
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..865
                     /gene="NAA16"
                     /coded_by="XM_041467095.1:79..2676"
                     /db_xref="GeneID:121353345"
ORIGIN      
        1 mpsvplppke snlfkrilkc yeqkqykngl kfckmilsnp kfaehgetla mkgltlnclg
       61 kkeeayefvr kglrndvksh vcwhvygllq rsdkkydeai kcyrnalkld kdnlqilrdl
      121 sllqiqmrdl egyretryql lqlrptqras wigyaiayhl lkdydmalkl leefrktqqv
      181 ppnkidyeys elilyqnqvm readlfqesl ehietyekqi cdkliveeik gemllklgrl
      241 keagevykel iernaenwyy yeglekalqp stleerlqiy eevskrhpra vsprrlplnf
      301 vsgekfrelt dkflrvnfsk gcpplfttlk slyynpekvs tiqelvtgye aslktcdlfs
      361 tsengekepp ttllwvryfl aqhfdklgqc slaldyinaa iastptliel fylkakiykh
      421 vgnikeaakw mdeaqsldta drfinskcak ymlranmvkd aeemcskftr egtsamenln
      481 emqcmwfqte caaayqrlgk ygdalkkche verhffeitd dqfdfhtycm rkmtlrayvd
      541 llrledvlrk hafyfraars aieiylklhd npltneskeq evnsenlsak elkkmlskqr
      601 raqkkaklee erkhaererq qknqkkkrde eeeetsgpre elvpeklerv enpleeaikf
      661 liplknligd diethllafe iyfrkgkfll mlqsvkrafa inrnnpwlhe clikfskavs
      721 dhsnlpeivs kvltqemqki fvnknlesfn eeflkhnats iqhqlsgakm myfldksrqe
      781 kaiavatrld knmrdknvkt ltkvfealld gsfgschaqc eeyqaachkl fpftsafmpa
      841 tnednssias vnhtainhdl lsnei
//
LOCUS       XP_041323030             700 aa            linear   VRT 06-MAY-2021
DEFINITION  N-alpha-acetyltransferase 16, NatA auxiliary subunit isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323030
VERSION     XP_041323030.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467096.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..700
                     /product="N-alpha-acetyltransferase 16, NatA auxiliary
                     subunit isoform X2"
                     /calculated_mol_wt=81628
     Region          22..533
                     /region_name="NatA_aux_su"
                     /note="N-terminal acetyltransferase A, auxiliary subunit;
                     pfam12569"
                     /db_xref="CDD:463630"
     Region          211..237
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(213..214,217..218,220,244,247..248,251..252,
                     254..255,278,281..282,285..286,289)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          242..272
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          277..302
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..700
                     /gene="NAA16"
                     /coded_by="XM_041467096.1:239..2341"
                     /db_xref="GeneID:121353345"
ORIGIN      
        1 malklleefr ktqqvppnki dyeyselily qnqvmreadl fqeslehiet yekqicdkli
       61 veeikgemll klgrlkeage vykelierna enwyyyegle kalqpstlee rlqiyeevsk
      121 rhpravsprr lplnfvsgek freltdkflr vnfskgcppl fttlkslyyn pekvstiqel
      181 vtgyeaslkt cdlfstseng ekeppttllw vryflaqhfd klgqcslald yinaaiastp
      241 tlielfylka kiykhvgnik eaakwmdeaq sldtadrfin skcakymlra nmvkdaeemc
      301 skftregtsa menlnemqcm wfqtecaaay qrlgkygdal kkcheverhf feitddqfdf
      361 htycmrkmtl rayvdllrle dvlrkhafyf raarsaieiy lklhdnpltn eskeqevnse
      421 nlsakelkkm lskqrraqkk akleeerkha ererqqknqk kkrdeeeeet sgpreelvpe
      481 klervenple eaikfliplk nligddieth llafeiyfrk gkfllmlqsv krafainrnn
      541 pwlheclikf skavsdhsnl peivskvltq emqkifvnkn lesfneeflk hnatsiqhql
      601 sgakmmyfld ksrqekaiav atrldknmrd knvktltkvf ealldgsfgs chaqceeyqa
      661 achklfpfts afmpatnedn ssiasvnhta inhdllsnei
//
LOCUS       XP_041323032             530 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide chain release factor 1, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323032
VERSION     XP_041323032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..530
                     /product="peptide chain release factor 1, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=59495
     Region          162..508
                     /region_name="PrfA"
                     /note="Protein chain release factor RF1 [Translation,
                     ribosomal structure and biogenesis]; COG0216"
                     /db_xref="CDD:439986"
     CDS             1..530
                     /gene="MTRF1"
                     /coded_by="XM_041467098.1:96..1688"
                     /db_xref="GeneID:121353346"
ORIGIN      
        1 maraalgqir raeaafaagv aealpeqrgt gsafsrrhag tgsapaalpv crgpagragi
       61 paasgradgg ekirnkmkpf rkvclfksll anccchsqld scllppvakk igcmvglhnh
      121 gfwrpkplld tarftlsfns whrknhqdsq alwkheavqk yleslskeyq qvshqlsahs
      181 lndfeqralr rrcadlspia safqeikeae gevqeleamc aeldsrdekq llelaleeke
      241 sldkkmnmlc rklfqllvpk ekydrspvil evtagrttgg dicqqftkem fdmyqsyady
      301 krwtfdivny tpaeigglhh aaahisgenv yrhlkyeggt hrvqripetg mssrmqriht
      361 gtmsvivlpq peevdvkvdp kdlridtfra kgaggqhvnk tdsavrivhl ptglavecqq
      421 ersqqlnkei alrtlrakly qqvlekqlsq eqsarklqlg traqserirt ynftqdrvtd
      481 hrisydarni keilsgkeal dklinrllef aeieavtqyl enlqaleggv
//
LOCUS       XP_041323033             470 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide chain release factor 1, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323033
VERSION     XP_041323033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..470
                     /product="peptide chain release factor 1, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=53826
     Region          102..448
                     /region_name="PrfA"
                     /note="Protein chain release factor RF1 [Translation,
                     ribosomal structure and biogenesis]; COG0216"
                     /db_xref="CDD:439986"
     CDS             1..470
                     /gene="MTRF1"
                     /coded_by="XM_041467099.1:93..1505"
                     /db_xref="GeneID:121353346"
ORIGIN      
        1 mycellisgg ekirnkmkpf rkvclfksll anccchsqld scllppvakk igcmvglhnh
       61 gfwrpkplld tarftlsfns whrknhqdsq alwkheavqk yleslskeyq qvshqlsahs
      121 lndfeqralr rrcadlspia safqeikeae gevqeleamc aeldsrdekq llelaleeke
      181 sldkkmnmlc rklfqllvpk ekydrspvil evtagrttgg dicqqftkem fdmyqsyady
      241 krwtfdivny tpaeigglhh aaahisgenv yrhlkyeggt hrvqripetg mssrmqriht
      301 gtmsvivlpq peevdvkvdp kdlridtfra kgaggqhvnk tdsavrivhl ptglavecqq
      361 ersqqlnkei alrtlrakly qqvlekqlsq eqsarklqlg traqserirt ynftqdrvtd
      421 hrisydarni keilsgkeal dklinrllef aeieavtqyl enlqaleggv
//
LOCUS       XP_041323034             454 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide chain release factor 1, mitochondrial isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323034
VERSION     XP_041323034.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467100.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="peptide chain release factor 1, mitochondrial
                     isoform X3"
                     /calculated_mol_wt=51990
     Region          86..432
                     /region_name="PrfA"
                     /note="Protein chain release factor RF1 [Translation,
                     ribosomal structure and biogenesis]; COG0216"
                     /db_xref="CDD:439986"
     CDS             1..454
                     /gene="MTRF1"
                     /coded_by="XM_041467100.1:151..1515"
                     /db_xref="GeneID:121353346"
ORIGIN      
        1 mkpfrkvclf ksllanccch sqldscllpp vakkigcmvg lhnhgfwrpk plldtarftl
       61 sfnswhrknh qdsqalwkhe avqkylesls keyqqvshql sahslndfeq ralrrrcadl
      121 spiasafqei keaegevqel eamcaeldsr dekqllelal eekesldkkm nmlcrklfql
      181 lvpkekydrs pvilevtagr ttggdicqqf tkemfdmyqs yadykrwtfd ivnytpaeig
      241 glhhaaahis genvyrhlky eggthrvqri petgmssrmq rihtgtmsvi vlpqpeevdv
      301 kvdpkdlrid tfrakgaggq hvnktdsavr ivhlptglav ecqqersqql nkeialrtlr
      361 aklyqqvlek qlsqeqsark lqlgtraqse rirtynftqd rvtdhrisyd arnikeilsg
      421 kealdklinr llefaeieav tqylenlqal eggv
//
LOCUS       XP_041323035             285 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide chain release factor 1, mitochondrial isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323035
VERSION     XP_041323035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..285
                     /product="peptide chain release factor 1, mitochondrial
                     isoform X4"
                     /calculated_mol_wt=32499
     Region          <6..263
                     /region_name="PrfA"
                     /note="Protein chain release factor RF1 [Translation,
                     ribosomal structure and biogenesis]; COG0216"
                     /db_xref="CDD:439986"
     CDS             1..285
                     /gene="MTRF1"
                     /coded_by="XM_041467101.1:207..1064"
                     /db_xref="GeneID:121353346"
ORIGIN      
        1 mnmlcrklfq llvpkekydr spvilevtag rttggdicqq ftkemfdmyq syadykrwtf
       61 divnytpaei gglhhaaahi sgenvyrhlk yeggthrvqr ipetgmssrm qrihtgtmsv
      121 ivlpqpeevd vkvdpkdlri dtfrakgagg qhvnktdsav rivhlptgla vecqqersqq
      181 lnkeialrtl raklyqqvle kqlsqeqsar klqlgtraqs erirtynftq drvtdhrisy
      241 darnikeils gkealdklin rllefaeiea vtqylenlqa leggv
//
LOCUS       XP_041323036             673 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323036
VERSION     XP_041323036.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467102.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..673
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..673
                     /product="transcription factor E2-alpha isoform X1"
                     /calculated_mol_wt=71211
     Region          562..646
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(570,574,576..578,580,585,606..607)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(583..584,587..588,590..591,594,598,608,611,615,618,
                     621..626)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..673
                     /gene="TCF3"
                     /coded_by="XM_041467102.1:215..2236"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf lgaglvgkss erasystfgr
      121 dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp nnprrrgaes sidgqpkkvr
      181 kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf ymtdglhnsp dlwsspgams
      241 qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn gglpsvsgfs sastaygvss
      301 htppisgtdt imgnrgttag ssgdalgkal asiyspdhss nnfssnpstp vgspqglags
      361 sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn havgqtsamp snhgdmhgll
      421 gsapahsaav gslgqafpas vmalgsrhps lvggghpedg lssnpsllhn hvtlpsqpss
      481 lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen tsvadnseee kkelkpsrnr
      541 trcslnsqde deeddllppe qkaerererr vannarerlr vrdineafke lgrmcqlhln
      601 sekpqtklli lhqavsviln leqqvrernl npkaaclkrr eeekvsgvvg dpqmtlsash
      661 pglgdghnpv ghm
//
LOCUS       XP_041323037             672 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323037
VERSION     XP_041323037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..672
                     /product="transcription factor E2-alpha isoform X2"
                     /calculated_mol_wt=71083
     Region          561..645
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(569,573,575..577,579,584,605..606)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(582..583,586..587,589..590,593,597,607,610,614,617,
                     620..625)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..672
                     /gene="TCF3"
                     /coded_by="XM_041467103.1:215..2233"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrsygegp hygehrdlps hnsissspfl gaglvgksse rasystfgrd
      121 tgmpglnqpg flpsemgias pstlsptggk ggsqyfsypn nprrrgaess idgqpkkvrk
      181 vppglpssvy psnsgddysr dpagytpskp pstvypgafy mtdglhnspd lwsspgamsq
      241 ssygamlgss ssplpqssgf nslhqhermn yqlhsgevng glpsvsgfss astaygvssh
      301 tppisgtdti mgnrgttags sgdalgkala siyspdhssn nfssnpstpv gspqglagss
      361 qwpraggaga lspsyegslh tlqnkmedrl deaihvlrnh avgqtsamps nhgdmhgllg
      421 sapahsaavg slgqafpasv malgsrhpsl vggghpedgl ssnpsllhnh vtlpsqpssl
      481 pdlsrqqdty sglsgglgrs svssgtseik reekedeent svadnseeek kelkpsrnrt
      541 rcslnsqded eeddllppeq kaerererrv annarerlrv rdineafkel grmcqlhlns
      601 ekpqtkllil hqavsvilnl eqqvrernln pkaaclkrre eekvsgvvgd pqmtlsashp
      661 glgdghnpvg hm
//
LOCUS       XP_041323039             668 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323039
VERSION     XP_041323039.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467105.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..668
                     /product="transcription factor E2-alpha isoform X3"
                     /calculated_mol_wt=70638
     Region          483..>588
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     Region          557..641
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(565,569,571..573,575,580,601..602)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(578..579,582..583,585..586,589,593,603,606,610,613,
                     616..621)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..668
                     /gene="TCF3"
                     /coded_by="XM_041467105.1:215..2221"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf lgaglvgkss erasystfgr
      121 dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp nnprrrgaes sidgqpkkvr
      181 kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf ymtdglhnsp dlwsspgams
      241 qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn gglpsvsgfs sastaygvss
      301 htppisgtdt imgnrgttag ssgdalgkal asiyspdhss nnfssnpstp vgspqglags
      361 sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn havgqtsamp snhgdmhgll
      421 gsapahsaav gslgqafpas vmalgsrhps lvggghpedg lssnpsllhn hvtlpsqpss
      481 lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen tsvadnseee kkelkpsrnr
      541 tsqdedeedd llppeqkaer ererrvanna rerlrvrdin eafkelgrmc qlhlnsekpq
      601 tkllilhqav svilnleqqv rernlnpkaa clkrreeekv sgvvgdpqmt lsashpglgd
      661 ghnpvghm
//
LOCUS       XP_041323040             664 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323040
VERSION     XP_041323040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..664
                     /product="transcription factor E2-alpha isoform X4"
                     /calculated_mol_wt=70058
     Region          551..624
                     /region_name="bHLH_E-protein_E47-like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor E47 and similar proteins; cd18943"
                     /db_xref="CDD:381513"
     Site            order(561,565,567..569,571,576,597..598)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381513"
     Site            order(574..575,578..579,581..582,585,589,599,602,606,
                     608..610,612..613,615..617,619)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:381513"
     Site            order(574..575,578..579,581..582,585,589,599,602,606,609,
                     612..617)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381513"
     CDS             1..664
                     /gene="TCF3"
                     /coded_by="XM_041467106.1:215..2209"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf lgaglvgkss erasystfgr
      121 dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp nnprrrgaes sidgqpkkvr
      181 kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf ymtdglhnsp dlwsspgams
      241 qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn gglpsvsgfs sastaygvss
      301 htppisgtdt imgnrgttag ssgdalgkal asiyspdhss nnfssnpstp vgspqglags
      361 sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn havgqtsamp snhgdmhgll
      421 gsapahsaav gslgqafpas vmalgsrhps lvggghpedg lssnpsllhn hvtlpsqpss
      481 lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen tsvadnseee kkelkpsrnr
      541 tsstdealsl edkdlrdrer rmannarerv rvrdineafk elgrmcqmhl ktdkaqtkli
      601 ilqqavqvil gleqqvrern lnpkaaclkr reeekvsgvv gdpqmtlsas hpglgdghnp
      661 vghm
//
LOCUS       XP_041323041             663 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323041
VERSION     XP_041323041.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467107.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..663
                     /product="transcription factor E2-alpha isoform X5"
                     /calculated_mol_wt=69971
     Region          483..>593
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     Region          550..623
                     /region_name="bHLH_E-protein_E47-like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor E47 and similar proteins; cd18943"
                     /db_xref="CDD:381513"
     Site            order(560,564,566..568,570,575,596..597)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381513"
     Site            order(573..574,577..578,580..581,584,588,598,601,605,
                     607..609,611..612,614..616,618)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:381513"
     Site            order(573..574,577..578,580..581,584,588,598,601,605,608,
                     611..616)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381513"
     CDS             1..663
                     /gene="TCF3"
                     /coded_by="XM_041467107.1:215..2206"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf lgaglvgkss erasystfgr
      121 dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp nnprrrgaes sidgqpkkvr
      181 kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf ymtdglhnsp dlwsspgams
      241 qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn gglpsvsgfs sastaygvss
      301 htppisgtdt imgnrgttag ssgdalgkal asiyspdhss nnfssnpstp vgspqglags
      361 sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn havgqtsamp snhgdmhgll
      421 gsapahsaav gslgqafpas vmalgsrhps lvggghpedg lssnpsllhn hvtlpsqpss
      481 lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen tsvadnseee kkelkpsrnr
      541 tstdealsle dkdlrdrerr mannarervr vrdineafke lgrmcqmhlk tdkaqtklii
      601 lqqavqvilg leqqvrernl npkaaclkrr eeekvsgvvg dpqmtlsash pglgdghnpv
      661 ghm
//
LOCUS       XP_041323042             638 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323042
VERSION     XP_041323042.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467108.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..638
                     /product="transcription factor E2-alpha isoform X6"
                     /calculated_mol_wt=67715
     Region          483..>593
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     Region          568..>626
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(577..578,580,585,606..607)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(583..584,587..588,590..591,595,607..608,611..612,
                     615,617..618,621..622)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..638
                     /gene="TCF3"
                     /coded_by="XM_041467108.1:215..2131"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf lgaglvgkss erasystfgr
      121 dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp nnprrrgaes sidgqpkkvr
      181 kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf ymtdglhnsp dlwsspgams
      241 qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn gglpsvsgfs sastaygvss
      301 htppisgtdt imgnrgttag ssgdalgkal asiyspdhss nnfssnpstp vgspqglags
      361 sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn havgqtsamp snhgdmhgll
      421 gsapahsaav gslgqafpas vmalgsrhps lvggghpedg lssnpsllhn hvtlpsqpss
      481 lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen tsvadnseee kkelkpsrnr
      541 trcslnsqde deeddllppe qkaerererr vannarerlr vrdineafke lgrmcqlhln
      601 sekpqtklli lhqavsviln leqqvrvqtr pchwrtki
//
LOCUS       XP_041323043             633 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041323043
VERSION     XP_041323043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..633
                     /product="transcription factor E2-alpha isoform X7"
                     /calculated_mol_wt=66907
     Region          522..606
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(530,534,536..538,540,545,566..567)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(543..544,547..548,550..551,554,558,568,571,575,578,
                     581..586)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..633
                     /gene="TCF3"
                     /coded_by="XM_041467109.1:16..1917"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 maahnklsrg lderpgsgsw gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf
       61 lgaglvgkss erasystfgr dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp
      121 nnprrrgaes sidgqpkkvr kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf
      181 ymtdglhnsp dlwsspgams qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn
      241 gglpsvsgfs sastaygvss htppisgtdt imgnrgttag ssgdalgkal asiyspdhss
      301 nnfssnpstp vgspqglags sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn
      361 havgqtsamp snhgdmhgll gsapahsaav gslgqafpas vmalgsrhps lvggghpedg
      421 lssnpsllhn hvtlpsqpss lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen
      481 tsvadnseee kkelkpsrnr trcslnsqde deeddllppe qkaerererr vannarerlr
      541 vrdineafke lgrmcqlhln sekpqtklli lhqavsviln leqqvrernl npkaaclkrr
      601 eeekvsgvvg dpqmtlsash pglgdghnpv ghm
//
LOCUS       XP_041323045             632 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041323045
VERSION     XP_041323045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..632
                     /product="transcription factor E2-alpha isoform X8"
                     /calculated_mol_wt=66779
     Region          521..605
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(529,533,535..537,539,544,565..566)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(542..543,546..547,549..550,553,557,567,570,574,577,
                     580..585)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..632
                     /gene="TCF3"
                     /coded_by="XM_041467111.1:35..1933"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 maahnklsrg lderpgsgsw gtadqnsstf dqgrsygegp hygehrdlps hnsissspfl
       61 gaglvgksse rasystfgrd tgmpglnqpg flpsemgias pstlsptggk ggsqyfsypn
      121 nprrrgaess idgqpkkvrk vppglpssvy psnsgddysr dpagytpskp pstvypgafy
      181 mtdglhnspd lwsspgamsq ssygamlgss ssplpqssgf nslhqhermn yqlhsgevng
      241 glpsvsgfss astaygvssh tppisgtdti mgnrgttags sgdalgkala siyspdhssn
      301 nfssnpstpv gspqglagss qwpraggaga lspsyegslh tlqnkmedrl deaihvlrnh
      361 avgqtsamps nhgdmhgllg sapahsaavg slgqafpasv malgsrhpsl vggghpedgl
      421 ssnpsllhnh vtlpsqpssl pdlsrqqdty sglsgglgrs svssgtseik reekedeent
      481 svadnseeek kelkpsrnrt rcslnsqded eeddllppeq kaerererrv annarerlrv
      541 rdineafkel grmcqlhlns ekpqtkllil hqavsvilnl eqqvrernln pkaaclkrre
      601 eekvsgvvgd pqmtlsashp glgdghnpvg hm
//
LOCUS       XP_041323046             560 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323046
VERSION     XP_041323046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467112.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..560
                     /product="transcription factor E2-alpha isoform X9"
                     /calculated_mol_wt=58508
     CDS             1..560
                     /gene="TCF3"
                     /coded_by="XM_041467112.1:215..1897"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf lgaglvgkss erasystfgr
      121 dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp nnprrrgaes sidgqpkkvr
      181 kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf ymtdglhnsp dlwsspgams
      241 qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn gglpsvsgfs sastaygvss
      301 htppisgtdt imgnrgttag ssgdalgkal asiyspdhss nnfssnpstp vgspqglags
      361 sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn havgqtsamp snhgdmhgll
      421 gsapahsaav gslgqafpas vmalgsrhps lvggghpedg lssnpsllhn hvtlpsqpss
      481 lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen tsvadnseee kkelkpsrnr
      541 trcslnraks rererkegrq
//
LOCUS       XP_041323047             555 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323047
VERSION     XP_041323047.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467113.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..555
                     /product="transcription factor E2-alpha isoform X10"
                     /calculated_mol_wt=57934
     CDS             1..555
                     /gene="TCF3"
                     /coded_by="XM_041467113.1:215..1882"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrqsygeg phygehrdlp shnsissspf lgaglvgkss erasystfgr
      121 dtgmpglnqp gflpsemgia spstlsptgg kggsqyfsyp nnprrrgaes sidgqpkkvr
      181 kvppglpssv ypsnsgddys rdpagytpsk ppstvypgaf ymtdglhnsp dlwsspgams
      241 qssygamlgs sssplpqssg fnslhqherm nyqlhsgevn gglpsvsgfs sastaygvss
      301 htppisgtdt imgnrgttag ssgdalgkal asiyspdhss nnfssnpstp vgspqglags
      361 sqwpraggag alspsyegsl htlqnkmedr ldeaihvlrn havgqtsamp snhgdmhgll
      421 gsapahsaav gslgqafpas vmalgsrhps lvggghpedg lssnpsllhn hvtlpsqpss
      481 lpdlsrqqdt ysglsgglgr ssvssgtsei kreekedeen tsvadnseee kkelkpsrnr
      541 traksrerer kegrq
//
LOCUS       XP_041323048             667 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041323048
VERSION     XP_041323048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..667
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..667
                     /product="transcription factor E2-alpha isoform X11"
                     /calculated_mol_wt=70510
     Region          482..>587
                     /region_name="SF-CC1"
                     /note="splicing factor, CC1-like family; TIGR01622"
                     /db_xref="CDD:273721"
     Region          556..640
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(564,568,570..572,574,579,600..601)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(577..578,581..582,584..585,588,592,602,605,609,612,
                     615..620)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..667
                     /gene="TCF3"
                     /coded_by="XM_041467114.1:215..2218"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrsygegp hygehrdlps hnsissspfl gaglvgksse rasystfgrd
      121 tgmpglnqpg flpsemgias pstlsptggk ggsqyfsypn nprrrgaess idgqpkkvrk
      181 vppglpssvy psnsgddysr dpagytpskp pstvypgafy mtdglhnspd lwsspgamsq
      241 ssygamlgss ssplpqssgf nslhqhermn yqlhsgevng glpsvsgfss astaygvssh
      301 tppisgtdti mgnrgttags sgdalgkala siyspdhssn nfssnpstpv gspqglagss
      361 qwpraggaga lspsyegslh tlqnkmedrl deaihvlrnh avgqtsamps nhgdmhgllg
      421 sapahsaavg slgqafpasv malgsrhpsl vggghpedgl ssnpsllhnh vtlpsqpssl
      481 pdlsrqqdty sglsgglgrs svssgtseik reekedeent svadnseeek kelkpsrnrt
      541 sqdedeeddl lppeqkaere rerrvannar erlrvrdine afkelgrmcq lhlnsekpqt
      601 kllilhqavs vilnleqqvr ernlnpkaac lkrreeekvs gvvgdpqmtl sashpglgdg
      661 hnpvghm
//
LOCUS       XP_041323049             663 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor E2-alpha isoform X12 [Pyrgilauda ruficollis].
ACCESSION   XP_041323049
VERSION     XP_041323049.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467115.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..663
                     /product="transcription factor E2-alpha isoform X12"
                     /calculated_mol_wt=69930
     Region          550..623
                     /region_name="bHLH_E-protein_E47-like"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor E47 and similar proteins; cd18943"
                     /db_xref="CDD:381513"
     Site            order(560,564,566..568,570,575,596..597)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381513"
     Site            order(573..574,577..578,580..581,584,588,598,601,605,
                     607..609,611..612,614..616,618)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:381513"
     Site            order(573..574,577..578,580..581,584,588,598,601,605,608,
                     611..616)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381513"
     CDS             1..663
                     /gene="TCF3"
                     /coded_by="XM_041467115.1:215..2206"
                     /db_xref="GeneID:121353349"
ORIGIN      
        1 mnqqqqrmaa vgtdkelsdl ldfsmmfplp vangknrptt lastqfggsg lderpgsgsw
       61 gtadqnsstf dqgrsygegp hygehrdlps hnsissspfl gaglvgksse rasystfgrd
      121 tgmpglnqpg flpsemgias pstlsptggk ggsqyfsypn nprrrgaess idgqpkkvrk
      181 vppglpssvy psnsgddysr dpagytpskp pstvypgafy mtdglhnspd lwsspgamsq
      241 ssygamlgss ssplpqssgf nslhqhermn yqlhsgevng glpsvsgfss astaygvssh
      301 tppisgtdti mgnrgttags sgdalgkala siyspdhssn nfssnpstpv gspqglagss
      361 qwpraggaga lspsyegslh tlqnkmedrl deaihvlrnh avgqtsamps nhgdmhgllg
      421 sapahsaavg slgqafpasv malgsrhpsl vggghpedgl ssnpsllhnh vtlpsqpssl
      481 pdlsrqqdty sglsgglgrs svssgtseik reekedeent svadnseeek kelkpsrnrt
      541 sstdealsle dkdlrdrerr mannarervr vrdineafke lgrmcqmhlk tdkaqtklii
      601 lqqavqvilg leqqvrernl npkaaclkrr eeekvsgvvg dpqmtlsash pglgdghnpv
      661 ghm
//
LOCUS       XP_041323050             337 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353351 [Pyrgilauda ruficollis].
ACCESSION   XP_041323050
VERSION     XP_041323050.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467116.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="uncharacterized protein LOC121353351"
                     /calculated_mol_wt=36741
     Region          2..>119
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..337
                     /gene="LOC121353351"
                     /coded_by="XM_041467116.1:1..1014"
                     /db_xref="GeneID:121353351"
ORIGIN      
        1 mprppgaede aaavperrrg edellgegsp gwrtkglrrf qvsraardar gkrlfpqgra
       61 argtsrsste qrpseqswst gkrrrqrsss giqgqeagqq qtegaggreg aasreqqqdp
      121 fshwshrkck mlprgkgwlh tplspavtsp rhpwrqtels tatgcewpqv tctwapplal
      181 grraagapvl vlqqpswasc pftprdsqsl httlvcsagg gslaaplgal evwskevlgs
      241 aelqqpvwrw pwqnidqefa rffpllpfvk rfvpgssqlc gaqsgrmvqe twvlvweevg
      301 nsplpcrlyl slccsslgsw gscvavaqgk ggtgkqd
//
LOCUS       XP_041323051             450 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323051
VERSION     XP_041323051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="casein kinase I isoform X1"
                     /calculated_mol_wt=50949
     Region          45..332
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(52..58,60,73,75,119..123,125,127,165,167,169..170,
                     172,188,191,214..217)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(52..58,60,73,75,119..123,167,169..170,172,188)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(56,125,127,165,167,169,191,214..217)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            187..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          332..420
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..450
                     /gene="CSNK1G2"
                     /coded_by="XM_041467117.1:452..1804"
                     /db_xref="GeneID:121353352"
ORIGIN      
        1 mdfdkrggkg eleegkrmsk tgggrsghgg rgagtnsgvl mvgpnfrvgk kigcgnfgel
       61 rlgknlytne yvaiklepik srapqlhley rfykqlgnae gipqvyyfgp cgkynamvle
      121 llgpsledlf dlcdrtftlk tvlmiaiqli trmeyvhtks liyrdvkpen flvgrpgskr
      181 qhtihiidfg lakeyidpet kkhipyrehk sltgtaryms inthlgkeqs rrddlealgh
      241 mfmyflrgsl pwqglkadtl keryqkigdt kratpvevlc enfpeematy lryvrrldff
      301 ekpdydylrk lftdlferng yvfdyeydwa gkplptpigt mhsevqvqpp nrdkaqphtk
      361 hqppegtelw dpqaggqpae eplgahlaag rlggsvqvms stngelntdd ptaghsnapi
      421 taptevevtd dtkcccffkr rkrkttkrrk
//
LOCUS       XP_041323052             415 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323052
VERSION     XP_041323052.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467118.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..415
                     /product="casein kinase I isoform X2"
                     /calculated_mol_wt=47474
     Region          45..332
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(52..58,60,73,75,119..123,125,127,165,167,169..170,
                     172,188,191,214..217)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(52..58,60,73,75,119..123,167,169..170,172,188)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(56,125,127,165,167,169,191,214..217)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            187..217
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          332..385
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..415
                     /gene="CSNK1G2"
                     /coded_by="XM_041467118.1:452..1699"
                     /db_xref="GeneID:121353352"
ORIGIN      
        1 mdfdkrggkg eleegkrmsk tgggrsghgg rgagtnsgvl mvgpnfrvgk kigcgnfgel
       61 rlgknlytne yvaiklepik srapqlhley rfykqlgnae gipqvyyfgp cgkynamvle
      121 llgpsledlf dlcdrtftlk tvlmiaiqli trmeyvhtks liyrdvkpen flvgrpgskr
      181 qhtihiidfg lakeyidpet kkhipyrehk sltgtaryms inthlgkeqs rrddlealgh
      241 mfmyflrgsl pwqglkadtl keryqkigdt kratpvevlc enfpeematy lryvrrldff
      301 ekpdydylrk lftdlferng yvfdyeydwa gkplptpigt mhsevqvqpp nrdkaqphtk
      361 hqvmsstnge lntddptagh snapitapte vevtddtkcc cffkrrkrkt tkrrk
//
LOCUS       XP_041323053            1218 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit delta-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323053
VERSION     XP_041323053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467119.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1218
                     /product="AP-3 complex subunit delta-1"
                     /calculated_mol_wt=138226
     Region          32..580
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          151..172
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Site            order(164..165,168,171..172,201..202,205,208..209,212,
                     239..240,243,246,258,261,284..285,288,291..292,321..322,
                     325,328..329)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          184..212
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          220..262
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          271..292
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          301..330
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          335..364
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          661..807
                     /region_name="AP3D1"
                     /note="AP-3 complex subunit delta-1; pfam06375"
                     /db_xref="CDD:461889"
     CDS             1..1218
                     /gene="AP3D1"
                     /coded_by="XM_041467119.1:285..3941"
                     /db_xref="GeneID:121353353"
ORIGIN      
        1 malkmvkgsi drmfdknlqd lvrgirnhke deakyisqci deikqelkqd niavkanavc
       61 kltylqmlgy diswaafnii evmsaskftf krigylaasq cfhegtdvim lttnqirkdl
      121 sspnqydtgv altglscfvt pdlardland imtlmshtkp yirkkavlim ykvflkypes
      181 lrpafprlke kledpdpgvq saavnvicel arrnpknyls laplffklmt sstnnwvlik
      241 iiklfgaltp leprlgkkli epltnlihst samsllyecv ntviavlisl ssgmpnhsas
      301 iqlcvqklri liedsdqnlk ylgllamski lkthpksvqs hkdlilqcld dkdesirlra
      361 ldllygmvsk knlmeivkkl mihvdkaegt tyrdelltki idicsqsnyq yitnfewyis
      421 ilveltrleg trhghliaaq mldvairvka irkfavsqma mlldnahlia sntqrngice
      481 vlyaaawicg efsehleean qtleamlrpk vttlpghiqa vyvqnmvkly asilqqkeqa
      541 gekeaaqeit qlmierlpqf vqsadlevqe rascilqlik yiqklqvkev pvaeevialf
      601 agelnpvapk aqkkvpvpeg ldldawinep psdsesedek pktifheeeq rhsrhrqpei
      661 deeelarrre arkqeqannp fyiksspspq kryqdtpgve hipvvqidls vplkvpgmpm
      721 sdqyvkleee rrhkqklekd kkkkkqkkek rgkhhrhnsl hteseediap ahhvdiitee
      781 mpenalpsde ddkdpndpyk aldidldkpl adseklpvqr hrnvetlksp dsevplvekk
      841 skkpkkkekk hkdkerdkgk kkekekkvve eeeeevkkge dldfwlstap paaptpqpqs
      901 epgmgtavva esqvvkkeer eeqdeeeede gkksskhkkk khkkekeeks kdkkkskkks
      961 hhseeeppes vqngtledep lppmssyrll aenpyikmty diqgnlqnds qvtvsvifen
     1021 kstsflksme lnvldslntk mlrpegssvh dgipvpfqlp pgisneaqfv ftlqsivmaq
     1081 klkgtlsfiv kndegsthek ldfklhfsca sylittpcys dafakllesg dlhmssikvd
     1141 gisisfqhll akicfhhhfs vvervdscas mysrsiqghh vcllvkkgen svsidgkcnd
     1201 stllsnllde mketlskc
//
LOCUS       XP_041323054            1230 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA exonuclease 1 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041323054
VERSION     XP_041323054.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467120.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1230
                     /product="RNA exonuclease 1 homolog"
                     /calculated_mol_wt=134589
     Region          811..969
                     /region_name="EloA-BP1"
                     /note="ElonginA binding-protein 1; pfam15870"
                     /db_xref="CDD:464914"
     Region          1070..1218
                     /region_name="REX1_like"
                     /note="DEDDh 3'-5' exonuclease domain of RNA exonuclease
                     1, -3 and similar eukaryotic proteins; cd06145"
                     /db_xref="CDD:99848"
     Site            order(1073..1076,1078,1151..1152,1154..1156,1205,1210)
                     /site_type="active"
                     /db_xref="CDD:99848"
     Site            order(1073..1076,1078,1151..1152,1154..1155,1205,1210)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99848"
     Site            order(1073,1075,1156,1205,1210)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99848"
     CDS             1..1230
                     /gene="REXO1"
                     /coded_by="XM_041467120.1:385..4077"
                     /db_xref="GeneID:121353354"
ORIGIN      
        1 mlrstgyfrg idcpflnagg sgpgrgcrrp ychfrhppva papcgasgas gdpsvglplg
       61 hgaergydpy npelprpsle vedgfladit dvtpgilele lvnkaieavk nevereqkky
      121 eellettkef gasegsslis ntpvsaagpq ndsfasleyn pgsynfsnns dynptplaaa
      181 grsskytlds srskgssley vpkavvqnkk ysstvtnnky viddskpstd leydplsnys
      241 arllgkattk gskrerasdy edsyspsrkk lcedpdddev larfsssede aeveyktapg
      301 sspskagses esnefsskeq stkvdgsasq eskeagkhre dlpnsqktla knssdknska
      361 aklcsgknnk eienknkdsk dktkkkktdv skapglseag kkeknknadk dkvlkkeekl
      421 ktkneeknck dksikvktdg nlkkpekqks ekvdgckkek sksstsssgk sksegvtkgt
      481 ekvgsskkdp qskttdvkng kessgrknke kgtksslerk kdkvscagqg epkkgqkqqs
      541 lshvdlfgde sgdeddkgrp lssslldvss dldeadsgsa sdsdkdrtkk vkrsklskss
      601 sssstsddid ysilekdvdf esdpmeeclr ifneskdvkt edkgrlgkqp skeeaneekt
      661 ednlttlfpg qkrrishlvk qgnaeapskp vvrpyrppta qevcyqriql aqqqaaqlvg
      721 avqktslclp gekrriahvp naaltaaakq slgsskttvg grsvtpsnds eaptlplkpc
      781 tlagmasktt stivpkrvah vpslqsttlq rpviptefga kvptnirqry lnlfideclk
      841 fcsssqeafd kalaeekvay erstsrniyl nvavntlkkl rslvpnspas tnktsnkkvv
      901 sheavlggkl aaktsftlnr sgslraedlt gaalyrrlke ylmteeqlke ngypmphpek
      961 agravlftae ekkvidsscr iccrcgteym vsasgscirk eecvhhwgrl rkqrvpggwe
     1021 thysccsgav gspgcqvakq hvhdgrkesl dgfvktfekl pttdgypgiy aldcemcytk
     1081 qgleltrvtv inselkvvyd tfvkpdskvv dyntrfsgvt eedlentsit lrdvqavlln
     1141 mfsadtilig hslesdlfal klihgtvvdt aivfphrlgl pykralrtlm adylkriiqd
     1201 nveghdssed aracmelmvw kiredakvkr
//
LOCUS       XP_041323055             758 aa            linear   VRT 06-MAY-2021
DEFINITION  muellerian-inhibiting factor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323055
VERSION     XP_041323055.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467121.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="muellerian-inhibiting factor isoform X1"
                     /calculated_mol_wt=82465
     Region          127..645
                     /region_name="AMH_N"
                     /note="Anti-Mullerian hormone, N terminal region;
                     pfam04709"
                     /db_xref="CDD:461402"
     Region          659..758
                     /region_name="TGF_beta_AMH"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in anti-Muellerian hormone (AMH) and similar
                     proteins; cd13757"
                     /db_xref="CDD:381635"
     Site            order(665,667,674,681,683..685,703..704,707..708,710..711,
                     714,719..720,723,725..726,729,748..750,752,758)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381635"
     CDS             1..758
                     /gene="AMH"
                     /coded_by="XM_041467121.1:802..3078"
                     /db_xref="GeneID:121353355"
ORIGIN      
        1 msalrglllc lvlllpsaal prkqgrdslv elslleepgl gaegrkvgng ssqetprsrr
       61 aaatrlfskp epgakcpqev aeeggpswsr sspqpwplgg legpvcrvrm eqdgasprql
      121 evvgvlshye ssfikllrrr rswdgnlagt fglcrpgeae aaphplqrih ehvlepgler
      181 flvlhleeaa lssarqrgsg sssgsghsvp eplesrfpwg lreaapcwpg agcvplstsl
      241 epgrgfaesl lpvgscpgas vpeplphtrs paalegihgr vspvpvqwea qvklrfqlvf
      301 qeevgravge lqaavmlfyl grregrgsgh pqellatgpg lprdqrlcls rdtqylalaa
      361 aaasvtrsae rlrfsaslai hggagagapl prtevqqllf gsddkcftrm tpvllllaks
      421 rqqeeeeeee evlapssyls aegvvdtapy pqlsppqagt eelptptapg qantsspvpg
      481 gsaqflatlt hfirqllsss sepppqptah hrldfemmet lphqllnlse eaalerlvqs
      541 eepsvlllpq dsgavleqhl gdwqpegtvl qllmgklqvv iqelrdipaf qanaalfqhl
      601 ltfcyypaep gqaevaergp gsrklrtlll lkalqsvrar wqerrkvqrq nrsarhqahc
      661 rlqeltidlr drhfiimptm yaanncegpc rlplsarips yfshtvlllg mqdqgsplrr
      721 apccvpvrys dqliislssd gleirkfpnm vaeecgcr
//
LOCUS       XP_041323056             757 aa            linear   VRT 06-MAY-2021
DEFINITION  muellerian-inhibiting factor isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323056
VERSION     XP_041323056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467122.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..757
                     /product="muellerian-inhibiting factor isoform X2"
                     /calculated_mol_wt=82394
     Region          127..644
                     /region_name="AMH_N"
                     /note="Anti-Mullerian hormone, N terminal region;
                     pfam04709"
                     /db_xref="CDD:461402"
     Region          658..757
                     /region_name="TGF_beta_AMH"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in anti-Muellerian hormone (AMH) and similar
                     proteins; cd13757"
                     /db_xref="CDD:381635"
     Site            order(664,666,673,680,682..684,702..703,706..707,709..710,
                     713,718..719,722,724..725,728,747..749,751,757)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381635"
     CDS             1..757
                     /gene="AMH"
                     /coded_by="XM_041467122.1:802..3075"
                     /db_xref="GeneID:121353355"
ORIGIN      
        1 msalrglllc lvlllpsaal prkqgrdslv elslleepgl gaegrkvgng ssqetprsrr
       61 aaatrlfskp epgakcpqev aeeggpswsr sspqpwplgg legpvcrvrm eqdgasprql
      121 evvgvlshye ssfikllrrr rswdgnlagt fglcrpgeae aaphplqrih ehvlepgler
      181 flvlhleeaa lssarqrgsg sssgsghsvp eplesrfpwg lreaapcwpg agcvplstsl
      241 epgrgfaesl lpvgscpgas vpeplphtrs paalegihgr vspvpvqwea qvklrfqlvf
      301 qeevgravge lqaavmlfyl grregrgsgh pqellatgpg lprdqrlcls rdtqylalaa
      361 aaasvtrsae rlrfsaslai hggaggaplp rtevqqllfg sddkcftrmt pvllllaksr
      421 qqeeeeeeee vlapssylsa egvvdtapyp qlsppqagte elptptapgq antsspvpgg
      481 saqflatlth firqllssss epppqptahh rldfemmetl phqllnlsee aalerlvqse
      541 epsvlllpqd sgavleqhlg dwqpegtvlq llmgklqvvi qelrdipafq anaalfqhll
      601 tfcyypaepg qaevaergpg srklrtllll kalqsvrarw qerrkvqrqn rsarhqahcr
      661 lqeltidlrd rhfiimptmy aanncegpcr lplsaripsy fshtvlllgm qdqgsplrra
      721 pccvpvrysd qliislssdg leirkfpnmv aeecgcr
//
LOCUS       XP_041323057             661 aa            linear   VRT 06-MAY-2021
DEFINITION  muellerian-inhibiting factor isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323057
VERSION     XP_041323057.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467123.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..661
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..661
                     /product="muellerian-inhibiting factor isoform X3"
                     /calculated_mol_wt=72721
     Region          127..548
                     /region_name="AMH_N"
                     /note="Anti-Mullerian hormone, N terminal region;
                     pfam04709"
                     /db_xref="CDD:461402"
     Region          562..661
                     /region_name="TGF_beta_AMH"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in anti-Muellerian hormone (AMH) and similar
                     proteins; cd13757"
                     /db_xref="CDD:381635"
     Site            order(568,570,577,584,586..588,606..607,610..611,613..614,
                     617,622..623,626,628..629,632,651..653,655,661)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381635"
     CDS             1..661
                     /gene="AMH"
                     /coded_by="XM_041467123.1:802..2787"
                     /db_xref="GeneID:121353355"
ORIGIN      
        1 msalrglllc lvlllpsaal prkqgrdslv elslleepgl gaegrkvgng ssqetprsrr
       61 aaatrlfskp epgakcpqev aeeggpswsr sspqpwplgg legpvcrvrm eqdgasprql
      121 evvgvlshye ssfikllrrr rswdgnlagt fglcrpgeae aaphplqrih ehvlepgler
      181 flvlhleevq weaqvklrfq lvfqeevgra vgelqaavml fylgrregrg sghpqellat
      241 gpglprdqrl clsrdtqyla laaaaasvtr saerlrfsas laihggagag aplprtevqq
      301 llfgsddkcf trmtpvllll aksrqqeeee eeeevlapss ylsaegvvdt apypqlsppq
      361 agteelptpt apgqantssp vpggsaqfla tlthfirqll ssssepppqp tahhrldfem
      421 metlphqlln lseeaalerl vqseepsvll lpqdsgavle qhlgdwqpeg tvlqllmgkl
      481 qvviqelrdi pafqanaalf qhlltfcyyp aepgqaevae rgpgsrklrt llllkalqsv
      541 rarwqerrkv qrqnrsarhq ahcrlqelti dlrdrhfiim ptmyaannce gpcrlplsar
      601 ipsyfshtvl llgmqdqgsp lrrapccvpv rysdqliisl ssdgleirkf pnmvaeecgc
      661 r
//
LOCUS       XP_041323059             660 aa            linear   VRT 06-MAY-2021
DEFINITION  muellerian-inhibiting factor isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323059
VERSION     XP_041323059.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467125.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..660
                     /product="muellerian-inhibiting factor isoform X4"
                     /calculated_mol_wt=72650
     Region          127..547
                     /region_name="AMH_N"
                     /note="Anti-Mullerian hormone, N terminal region;
                     pfam04709"
                     /db_xref="CDD:461402"
     Region          561..660
                     /region_name="TGF_beta_AMH"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in anti-Muellerian hormone (AMH) and similar
                     proteins; cd13757"
                     /db_xref="CDD:381635"
     Site            order(567,569,576,583,585..587,605..606,609..610,612..613,
                     616,621..622,625,627..628,631,650..652,654,660)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381635"
     CDS             1..660
                     /gene="AMH"
                     /coded_by="XM_041467125.1:802..2784"
                     /db_xref="GeneID:121353355"
ORIGIN      
        1 msalrglllc lvlllpsaal prkqgrdslv elslleepgl gaegrkvgng ssqetprsrr
       61 aaatrlfskp epgakcpqev aeeggpswsr sspqpwplgg legpvcrvrm eqdgasprql
      121 evvgvlshye ssfikllrrr rswdgnlagt fglcrpgeae aaphplqrih ehvlepgler
      181 flvlhleevq weaqvklrfq lvfqeevgra vgelqaavml fylgrregrg sghpqellat
      241 gpglprdqrl clsrdtqyla laaaaasvtr saerlrfsas laihggagga plprtevqql
      301 lfgsddkcft rmtpvlllla ksrqqeeeee eeevlapssy lsaegvvdta pypqlsppqa
      361 gteelptpta pgqantsspv pggsaqflat lthfirqlls sssepppqpt ahhrldfemm
      421 etlphqllnl seeaalerlv qseepsvlll pqdsgavleq hlgdwqpegt vlqllmgklq
      481 vviqelrdip afqanaalfq hlltfcyypa epgqaevaer gpgsrklrtl lllkalqsvr
      541 arwqerrkvq rqnrsarhqa hcrlqeltid lrdrhfiimp tmyaannceg pcrlplsari
      601 psyfshtvll lgmqdqgspl rrapccvpvr ysdqliisls sdgleirkfp nmvaeecgcr
//
LOCUS       XP_041323060             183 aa            linear   VRT 06-MAY-2021
DEFINITION  cilia- and flagella-associated protein 251-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323060
VERSION     XP_041323060.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467126.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="cilia- and flagella-associated protein 251-like"
                     /calculated_mol_wt=22108
     CDS             1..183
                     /gene="LOC121353356"
                     /coded_by="XM_041467126.1:533..1084"
                     /db_xref="GeneID:121353356"
ORIGIN      
        1 mavtegkksq ekqekkveee eeeeekeeke eeeeneeeee eeekeekeee keeneeeeee
       61 ekedkkeekk karegraihv erssrreara kdrtagdkpg rapraprepe qqpqkkrdre
      121 rkerkerrre rdesrregwr grpgradggr esprrdwkqq kgrkpwepap grdgraregk
      181 rrd
//
LOCUS       XP_041323061             156 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family J member 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323061
VERSION     XP_041323061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467127.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="pleckstrin homology domain-containing family J
                     member 1"
                     /calculated_mol_wt=18156
     Region          8..119
                     /region_name="PH_PLEKHJ1"
                     /note="Pleckstrin homology domain containing, family J
                     member 1 Pleckstrin homology (PH) domain; cd13258"
                     /db_xref="CDD:270078"
     CDS             1..156
                     /gene="PLEKHJ1"
                     /coded_by="XM_041467127.1:47..517"
                     /db_xref="GeneID:121353357"
ORIGIN      
        1 mgrggpamry nerellslar qpaekaaeir msvpkkgsvl kkrlvklvvn flfyfrtdea
       61 epigallleh ckitkeeenv fsisfieepe rkycfecate eqcqewveal krasyeflrr
      121 slifyrneiq kmtgkdpleq ygiseearfq lgahrq
//
LOCUS       XP_041323062             470 aa            linear   VRT 06-MAY-2021
DEFINITION  MAP kinase-interacting serine/threonine-protein kinase 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323062
VERSION     XP_041323062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467128.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..470
                     /product="MAP kinase-interacting serine/threonine-protein
                     kinase 2"
                     /calculated_mol_wt=53010
     Region          78..365
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(87..90,93,95,108,110,140,156..159,202,206..207,209,
                     222..223)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271075"
     CDS             1..470
                     /gene="MKNK2"
                     /coded_by="XM_041467128.1:56..1468"
                     /db_xref="GeneID:121353358"
ORIGIN      
        1 mvqkkseipg fhrsfkgqnp fdlefdqsnh lepvfnfecp prpdmpssqp idipdakkrn
       61 kkkkrcratd sfsgrfedvy qlqeevlgeg aharvqscvn litnkeyavk iiekrlghir
      121 srvfreveml yqcqghrnvl elieffeeee rfylvfekmr ggsilthihr rrhfneleas
      181 vvvqdiasal hflhnkgiah rdlkpenilc espdqvspvk icdfdlgsgi klngdcspis
      241 tpelltpcgs aeymapevve afneeasiyd krcdlwslgv ilyimlsgyp pfvghcgsdc
      301 gwdrgeacht cqnmlfesiq egkyefpdkd wahisfgakd liskllvrda kkrlsaaqvl
      361 ehpwvqgcap dntlptpiil qrnssakelt sfaaeaiavn rqltrhdede eeeaeeearp
      421 iiikatsram qlsppseskl akrrqkssla kavasgqhlv aplvlvadqa
//
LOCUS       XP_041323063             377 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323063
VERSION     XP_041323063.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467129.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="BTB/POZ domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=41883
     Region          <1..73
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          69..174
                     /region_name="BACK_BTBD2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     BTB/POZ domain-containing protein 2 (BTBD2); cd18523"
                     /db_xref="CDD:350598"
     Region          227..376
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..377
                     /gene="BTBD2"
                     /coded_by="XM_041467129.1:168..1301"
                     /db_xref="GeneID:121353359"
ORIGIN      
        1 mfnggmatts teielpdvep aaflallkfl ysdevqigpe tvmttlytak kyavpaleah
       61 cveflkknlr adnafmlltq arlfdepqla slclenidkn tsdalnaegf tdidldtlva
      121 vlerdtlgir evrlfnavvr wseaecqrqq lqvipenkrk vlgkalslir fplmtieefa
      181 agpaqsgilt drevvslflh ftvnpkprve fidrprcclr gkecsisrfq qvesrwgysg
      241 tsdrirfsvn krifvvgfgl ygsihgptdy qvniqiihtd sntvlgqndt gfscdgssnt
      301 frvmfkepve ilpnvnytac atlkgpdshy gtkglrkvih espttgaktc ftfcyaagnn
      361 ngtsvedgqi peiifyt
//
LOCUS       XP_041323064             309 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323064
VERSION     XP_041323064.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467130.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..309
                     /product="BTB/POZ domain-containing protein 2 isoform X2"
                     /calculated_mol_wt=34306
     Region          13..106
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          159..308
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..309
                     /gene="BTBD2"
                     /coded_by="XM_041467130.1:216..1145"
                     /db_xref="GeneID:121353359"
ORIGIN      
        1 mrgfpcvtes glarlfdepq laslclenid kntsdalnae gftdidldtl vavlerdtlg
       61 irevrlfnav vrwseaecqr qqlqvipenk rkvlgkalsl irfplmtiee faagpaqsgi
      121 ltdrevvslf lhftvnpkpr vefidrprcc lrgkecsisr fqqvesrwgy sgtsdrirfs
      181 vnkrifvvgf glygsihgpt dyqvniqiih tdsntvlgqn dtgfscdgss ntfrvmfkep
      241 veilpnvnyt acatlkgpds hygtkglrkv ihespttgak tcftfcyaag nnngtsvedg
      301 qipeiifyt
//
LOCUS       XP_041323065             377 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323065
VERSION     XP_041323065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="BTB/POZ domain-containing protein 2 isoform X1"
                     /calculated_mol_wt=41883
     Region          <1..73
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          69..174
                     /region_name="BACK_BTBD2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     BTB/POZ domain-containing protein 2 (BTBD2); cd18523"
                     /db_xref="CDD:350598"
     Region          227..376
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..377
                     /gene="BTBD2"
                     /coded_by="XM_041467131.1:203..1336"
                     /db_xref="GeneID:121353359"
ORIGIN      
        1 mfnggmatts teielpdvep aaflallkfl ysdevqigpe tvmttlytak kyavpaleah
       61 cveflkknlr adnafmlltq arlfdepqla slclenidkn tsdalnaegf tdidldtlva
      121 vlerdtlgir evrlfnavvr wseaecqrqq lqvipenkrk vlgkalslir fplmtieefa
      181 agpaqsgilt drevvslflh ftvnpkprve fidrprcclr gkecsisrfq qvesrwgysg
      241 tsdrirfsvn krifvvgfgl ygsihgptdy qvniqiihtd sntvlgqndt gfscdgssnt
      301 frvmfkepve ilpnvnytac atlkgpdshy gtkglrkvih espttgaktc ftfcyaagnn
      361 ngtsvedgqi peiifyt
//
LOCUS       XP_041323067             216 aa            linear   VRT 06-MAY-2021
DEFINITION  MOB kinase activator 3A [Pyrgilauda ruficollis].
ACCESSION   XP_041323067
VERSION     XP_041323067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="MOB kinase activator 3A"
                     /calculated_mol_wt=25347
     Region          35..207
                     /region_name="Mob1_phocein"
                     /note="Mob1/phocein family; pfam03637"
                     /db_xref="CDD:461000"
     CDS             1..216
                     /gene="MOB3A"
                     /coded_by="XM_041467133.1:284..934"
                     /db_xref="GeneID:121353360"
ORIGIN      
        1 mshalkqvfn kdktfrpkrk fepgtqrfel hkkaqaslna gldlkvavql ppgeeqndwv
       61 avhvvdffnr inliygtisd ycteqscpvm sggpkyeyrw qdehkyrkpt alsapqymnl
      121 lmdwievqin nedifptnvg tpfpknflpv vkkilsrlfr vfvhvyihhf dritqmgsea
      181 hvntcykhfy yfvkefnlid tkeleplkem tsrmch
//
LOCUS       XP_041323068             216 aa            linear   VRT 06-MAY-2021
DEFINITION  MOB kinase activator 3A [Pyrgilauda ruficollis].
ACCESSION   XP_041323068
VERSION     XP_041323068.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467134.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="MOB kinase activator 3A"
                     /calculated_mol_wt=25347
     Region          35..207
                     /region_name="Mob1_phocein"
                     /note="Mob1/phocein family; pfam03637"
                     /db_xref="CDD:461000"
     CDS             1..216
                     /gene="MOB3A"
                     /coded_by="XM_041467134.1:481..1131"
                     /db_xref="GeneID:121353360"
ORIGIN      
        1 mshalkqvfn kdktfrpkrk fepgtqrfel hkkaqaslna gldlkvavql ppgeeqndwv
       61 avhvvdffnr inliygtisd ycteqscpvm sggpkyeyrw qdehkyrkpt alsapqymnl
      121 lmdwievqin nedifptnvg tpfpknflpv vkkilsrlfr vfvhvyihhf dritqmgsea
      181 hvntcykhfy yfvkefnlid tkeleplkem tsrmch
//
LOCUS       XP_041323069             216 aa            linear   VRT 06-MAY-2021
DEFINITION  MOB kinase activator 3A [Pyrgilauda ruficollis].
ACCESSION   XP_041323069
VERSION     XP_041323069.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467135.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="MOB kinase activator 3A"
                     /calculated_mol_wt=25347
     Region          35..207
                     /region_name="Mob1_phocein"
                     /note="Mob1/phocein family; pfam03637"
                     /db_xref="CDD:461000"
     CDS             1..216
                     /gene="MOB3A"
                     /coded_by="XM_041467135.1:149..799"
                     /db_xref="GeneID:121353360"
ORIGIN      
        1 mshalkqvfn kdktfrpkrk fepgtqrfel hkkaqaslna gldlkvavql ppgeeqndwv
       61 avhvvdffnr inliygtisd ycteqscpvm sggpkyeyrw qdehkyrkpt alsapqymnl
      121 lmdwievqin nedifptnvg tpfpknflpv vkkilsrlfr vfvhvyihhf dritqmgsea
      181 hvntcykhfy yfvkefnlid tkeleplkem tsrmch
//
LOCUS       XP_041323070             207 aa            linear   VRT 06-MAY-2021
DEFINITION  AN1-type zinc finger protein 5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323070
VERSION     XP_041323070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="AN1-type zinc finger protein 5-like"
                     /calculated_mol_wt=22331
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          148..185
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..207
                     /gene="LOC121353361"
                     /coded_by="XM_041467136.1:439..1062"
                     /db_xref="GeneID:121353361"
ORIGIN      
        1 maqetnqtqv pllcttgcgf ygsprtngmc svcykeflqr qqssdrispp aptgpssspm
       61 aseaiagqhp egdstaedak asaqtpvthq mtamsisree tsneteefsk tdeassasss
      121 sgtlleisqn taegktasek pkpkknrcft crkkigltgf dcrcgnlfca ihrysdmhac
      181 pydykaeaae kirkenpivi aekiqkl
//
LOCUS       XP_041323071             465 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor ROR-beta-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323071
VERSION     XP_041323071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="nuclear receptor ROR-beta-like"
                     /calculated_mol_wt=52357
     Region          3..97
                     /region_name="NR_DBD_ROR"
                     /note="DNA-binding domain of Retinoid-related orphan
                     receptors (RORs) is composed of two C4-type zinc fingers;
                     cd06968"
                     /db_xref="CDD:143526"
     Site            order(10,13,27,30,46,52,62,65)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143526"
     Site            order(20..22,28..29,31,33,36,39,59..60,63,66,77,80)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143526"
     Region          215..453
                     /region_name="NR_LBD"
                     /note="The ligand binding domain of nuclear receptors, a
                     family of ligand-activated transcription regulators;
                     cl11397"
                     /db_xref="CDD:472173"
     Site            order(266..267,270,273..274,303..304,307..308,311,314,346)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132726"
     Site            order(275,278,282,287,292..293,295..296,299..300)
                     /site_type="active"
                     /note="coregulator recognition site [active]"
                     /db_xref="CDD:132726"
     CDS             1..465
                     /gene="LOC121353362"
                     /coded_by="XM_041467137.1:184..1581"
                     /db_xref="GeneID:121353362"
ORIGIN      
        1 mraqievipc kicgdkssgi hygvitcegc kgffrrsqqn nasyscsrqr nclidrtnrn
       61 rcqhcrlqkc lalgmsrdav kfgrmskkqr dslyaevqkh qqsqeqsggt kdepeplsrv
      121 yttsvssgls dlddistlsd gllfdfpltp dgsstyynld llasaqpspd qssldvadat
      181 likqesiyel mlepallahg alegaqlppd isvleidrva qnvvkshlet cqytteelkr
      241 lawslyspee vralqsksce amwqqcslqi snaiqyvvef akridgfmel cqndqiillk
      301 agclevllir mirafnplnn tilfegkfgg mqvfkslgcd dligavfelg rtlcrlqlsd
      361 eelalftaav llspdrpwlt eskkvqklqd kiyvalqhei qkkhsaedkl skmvsklplm
      421 kticnlhldk leffrllhpe tamnfpplyk evfnselqys dpres
//
LOCUS       XP_041323072             229 aa            linear   VRT 06-MAY-2021
DEFINITION  secretory carrier-associated membrane protein 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323072
VERSION     XP_041323072.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467138.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="secretory carrier-associated membrane protein 4"
                     /calculated_mol_wt=25783
     Region          6..179
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..229
                     /gene="SCAMP4"
                     /coded_by="XM_041467138.1:210..899"
                     /db_xref="GeneID:121353363"
ORIGIN      
        1 maekvnnfpp lpkfiplkpc fyqnfadeip idyqflvkri yhvwifycit lavnliacla
       61 wwigggygan fglailwlil fspcgyvcwf rpaykafrsd ssfnfmafff ifgaqflltv
      121 lqaigisgwg acgwlaavtf frtsvaaavf mlfpavmftm savamlicii rvhkiyrgag
      181 gsfqkaqdew nsgawrnpps reaqysnfsg nslpeyptvp nypsanqwp
//
LOCUS       XP_041323073             229 aa            linear   VRT 06-MAY-2021
DEFINITION  secretory carrier-associated membrane protein 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323073
VERSION     XP_041323073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467139.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="secretory carrier-associated membrane protein 4"
                     /calculated_mol_wt=25783
     Region          6..179
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..229
                     /gene="SCAMP4"
                     /coded_by="XM_041467139.1:367..1056"
                     /db_xref="GeneID:121353363"
ORIGIN      
        1 maekvnnfpp lpkfiplkpc fyqnfadeip idyqflvkri yhvwifycit lavnliacla
       61 wwigggygan fglailwlil fspcgyvcwf rpaykafrsd ssfnfmafff ifgaqflltv
      121 lqaigisgwg acgwlaavtf frtsvaaavf mlfpavmftm savamlicii rvhkiyrgag
      181 gsfqkaqdew nsgawrnpps reaqysnfsg nslpeyptvp nypsanqwp
//
LOCUS       XP_041323074             229 aa            linear   VRT 06-MAY-2021
DEFINITION  secretory carrier-associated membrane protein 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323074
VERSION     XP_041323074.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467140.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="secretory carrier-associated membrane protein 4"
                     /calculated_mol_wt=25783
     Region          6..179
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..229
                     /gene="SCAMP4"
                     /coded_by="XM_041467140.1:1034..1723"
                     /db_xref="GeneID:121353363"
ORIGIN      
        1 maekvnnfpp lpkfiplkpc fyqnfadeip idyqflvkri yhvwifycit lavnliacla
       61 wwigggygan fglailwlil fspcgyvcwf rpaykafrsd ssfnfmafff ifgaqflltv
      121 lqaigisgwg acgwlaavtf frtsvaaavf mlfpavmftm savamlicii rvhkiyrgag
      181 gsfqkaqdew nsgawrnpps reaqysnfsg nslpeyptvp nypsanqwp
//
LOCUS       XP_041323076             235 aa            linear   VRT 06-MAY-2021
DEFINITION  splicing factor 3A subunit 2, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323076
VERSION     XP_041323076.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467142.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>235
                     /product="splicing factor 3A subunit 2"
     Region          1..216
                     /region_name="PRP11"
                     /note="Splicing factor 3a, subunit 2 [RNA processing and
                     modification]; COG5246"
                     /db_xref="CDD:227571"
     CDS             1..235
                     /gene="SF3A2"
                     /coded_by="XM_041467142.1:113..>817"
                     /db_xref="GeneID:121353364"
ORIGIN      
        1 mdfqhrpggk tgsggvasas esnrdrrerl rqlaletidi nkdpyfmknh lgsyecklcl
       61 tlhnnegsyl ahtqgkkhqt nlarraakea keapaqpape kvkvevkkfv kigrpgykvt
      121 kqrdpetgqq sllfqidype iaesimprhr fmsayeqrie ppdrrwqyll maaepyetia
      181 fkvpsreidk aegkfwthwn retkqfflqf hfkmekppap pnlppgpptv krppp
//
LOCUS       XP_041323077            1336 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IK [Pyrgilauda ruficollis].
ACCESSION   XP_041323077
VERSION     XP_041323077.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467143.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 23% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1336
                     /product="phospholipid-transporting ATPase IK"
                     /calculated_mol_wt=149490
     Region          183..1135
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(546..548,685,708..710,774,821..823,951,954,957,977,
                     980)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1336
                     /gene="ATP8B3"
                     /coded_by="XM_041467143.1:1..4011"
                     /db_xref="GeneID:121353366"
ORIGIN      
        1 magplrvcrm ragrtpalas laavtnevas vpswarsrga gtarsgsfvp sasssslspp
       61 paflgpawgs tggrtvagrw qdsgstggrt vaarwqhggs tvaarwqqsr wrrsrrsagl
      121 cpdigagpgs gasmaeqdpa tgcprgkqql paftwevran drsyhrqark rfgfclskrk
      181 ysgnairtak ynvltflpln lyeqfhrman vyfvfvillq tfpeistlpw ytllfplscl
      241 liirglrdli ddigrhrsdr sinsrpceil agrrfcwqew rdicvgdivr lrkdsvvpad
      301 llllcsseps slcyvetadi dgetnlkfrq allithqelq seesmaafdg rvtceepnsr
      361 mhtftgtlrw rgrshaldge rillrgcrvr ntarcyglvl yagewfdski mrnsgkikrk
      421 ktkldhlmdr lvivifllll vtslglavas gfwartfqek hsylaalyqh tspaqqafln
      481 fwgftillsi iipmsmyitf efiylvnscf inwdlemyyg akdipaears tslsdqlgqi
      541 qyifsdktgt ltqnimsfkk ccvngtiygp gtghenkqpl gsglgqerpa eqnsdvcdvt
      601 lleaaqrddd pvlreflrll alchtvmved rgdqlvyqaa spdeealvla arnlgyvflg
      661 rtqdsitire lgrtrtyevl amldfnsdrk rmsvlvrdpq gtirlytkga dtvilerlrs
      721 rgpketlter aldrfaeetl rtlcvasrev seaefrawsr rhreaavllh draqeldrly
      781 eemeqnlqll gataiedklq dgvpetiqll klgnikvwvl tgdkqetamn igyacrlltd
      841 dmeileekev seilqaywes nnnlsgrgda pcsrrlsqqc petlshkrai iisgdfldki
      901 lhtgevlker kgwpwrwlcc graeasqdqg alvekafvdl asscqavicc rvtpkqkalm
      961 vqlvkkhkka vtlaigdgan dvnmiktadi gvgisglegl qavqcsdyal aqfsflqrll
     1021 lvhgrwnylr ickflrfffy ktfagllaqv wfafhsgfta qplyegwfla lynifytayp
     1081 vlsvglleqd vsakkslefp elyvvgqqde lfnyrvfgvt llhgvgtslv sfyitlwafe
     1141 dhvgtkvvgd yesfsvtval sallsvlvei vldtqywtvl sflmvtasll lfclfsfltq
     1201 tvdayriapa ifrfpdaswn altdpyvllv vllslvvnti psltvhavra ilgrattqqk
     1261 ihlkarrdpe ppvelrshvp rgsfrrssya fshqegyagl iargdslrar athgtapgal
     1321 rpqgtpavps arcppv
//
LOCUS       XP_041323078             260 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein MEX3D-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323078
VERSION     XP_041323078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467144.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>260
                     /product="RNA-binding protein MEX3D-like"
     Region          133..205
                     /region_name="KH-I_MEX3_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of MEX-3 RNA-binding proteins;
                     cd22423"
                     /db_xref="CDD:411851"
     Site            order(142..143,145..147,149..153,155..157,160,166..172,
                     200..201,204..205)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411851"
     Region          225..>258
                     /region_name="KH-I"
                     /note="K homology (KH) RNA-binding domain, type I;
                     cl00098"
                     /db_xref="CDD:469614"
     CDS             1..260
                     /gene="LOC121353367"
                     /coded_by="XM_041467144.1:1..>780"
                     /db_xref="GeneID:121353367"
ORIGIN      
        1 mpgsmyqpep gqpargpprc ltllsppppa gqepppepep greregppgp paqgeaaalr
       61 faldqlsllg legaeepagg agpgglrere rgggspvpap apaagafgsl applgppall
      121 peppasrkks vnmtecvpvp ssehvaeivg rqgckikalr aktntyiktp vrgeepvfiv
      181 tgrkedvema kreilsaaeh fsmiratrnk vngltgalqg ppnlpgqtti qvrvpyrvvg
      241 lvvgpkgati kriqqqtlff
//
LOCUS       XP_041323079             604 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat and immunoglobulin-like domain-containing nogo
            receptor-interacting protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323079
VERSION     XP_041323079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467145.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..604
                     /product="leucine-rich repeat and immunoglobulin-like
                     domain-containing nogo receptor-interacting protein 3"
                     /calculated_mol_wt=67828
     Region          25..57
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          36..55
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          57..80
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..395
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          81..104
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          129..152
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          153..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          177..200
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          201..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..272
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          273..296
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          297..320
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          409..498
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          426..430
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          439..443
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          464..468
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          478..483
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          491..494
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..604
                     /gene="LINGO3"
                     /coded_by="XM_041467145.1:1..1815"
                     /db_xref="GeneID:121353368"
ORIGIN      
        1 mphtmtwwlp vlalhmvlls pragacparc ecapqlrsvl chrkrltaip egiptetrvl
       61 elnknrircl npgdlapypl leeldfseni isnvepgafs nlfnlqtlrl rgnqlklipp
      121 gvftkltnlt lldisenklv illdymfqdl rnlkslevgd ndlvyisqra fsgllgleql
      181 tiekcnltsi saeslsylqn levlrlrhls isaledqnfk klynllqlei dnwplleevs
      241 ptsfqglnlt slsitytnit avpaaalrnl vylrylnlsy npistvlkgs fkdlirlqel
      301 hivgallvsv epqafsglrq irllnlssnf lstleestfh svntletlrv drnplacdcr
      361 llwilqrrkt lnfdgqqpmc ssppeiqgna lrdfpdsvlf eyftcqkpki rdrklqhvta
      421 regqsvsflc radgepdpsi awvspqhrmi ttrstgratv lpggtleirf aqvqdsgtyi
      481 ciasnaggnd tyfatltvkg rpadgahhan rtlylsdfnd tfhnntqvfl kftldlktil
      541 vstamgcitf lgvvlfcfll lfvwsrgrgq hknnfsveys frkvdgpttt tgqggarkfn
      601 mkmi
//
LOCUS       XP_041323080             440 aa            linear   VRT 06-MAY-2021
DEFINITION  one cut domain family member 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323080
VERSION     XP_041323080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="one cut domain family member 3"
                     /calculated_mol_wt=48499
     Region          265..337
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          360..415
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(361..365,367,384,390,403,405..406,409..410,412..414,
                     416..417)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(363,366,406,409..410,413)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..440
                     /gene="ONECUT3"
                     /coded_by="XM_041467146.1:1..1323"
                     /db_xref="GeneID:121353369"
ORIGIN      
        1 melamenlgs lhgvphsqpa ellspahgrq sshrnlvphg rpamvsgmas ileggdyrge
       61 hslgaplhpa msmscespsg mslsstyttl tplqhlppis tvsekfhhph hhhhhhhpht
      121 rlagnvsgsf tlmrdersla smgnlyshyp kdmpamgqpl splpnglgsl hnaqqplapy
      181 gpaghlpnek mlspngfdsh aamlsrgeeh larglaapss ammpplngmh phghphgqpg
      241 asllgererp apgpgsqpgg sgqveeintk evaqritael krysipqaif aqrilcrsqg
      301 tlsdllrnpk pwsklksgre tfrrmwkwlq epefqrmsal rlaackrkeq eqqkdrslqp
      361 kkqrlvftdl qrrtliaifk enkrpskemq mtisqqlgle lntvsnffmn arrrcmnrwq
      421 eepganpgvp ssststfska
//
LOCUS       XP_041323081             301 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha/beta hydrolase domain-containing protein 17A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323081
VERSION     XP_041323081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="alpha/beta hydrolase domain-containing protein
                     17A"
                     /calculated_mol_wt=33386
     Region          69..296
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..301
                     /gene="ABHD17A"
                     /coded_by="XM_041467147.1:281..1186"
                     /db_xref="GeneID:121353370"
ORIGIN      
        1 mnglsisqlc clfccppcps riaaklaflp peptyamvpe pepvgstgsl rgaagrwklh
       61 lkeradfqys qreldnievf vtkssrgnrv gcmyvrcvpg arytvlfshg navdlgqmss
      121 fyiglgtrin cnifsydysg ygvstgkpse rnlysdidaa wqalrtrygi speniilygq
      181 sigtvptvdl asryecaaiv lhspltsgmr vafpdtkkty wfdafpniek iskitspvli
      241 ihgtedevid fshglalfer cpkaveplwv dgaghndiel ysqylerlrk fisqelasqr
      301 n
//
LOCUS       XP_041323082            1724 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323082
VERSION     XP_041323082.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467148.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1724
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X1"
                     /calculated_mol_wt=187626
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          499..>652
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1724
                     /gene="DOT1L"
                     /coded_by="XM_041467148.1:120..5294"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsgfsys sgsvavngnl tnspahlnhs vdqaalddsg
      961 slfnsvgsrs stpqhpllmm rnsgqnspaq qhssprlsgp aqslagglqs aeaqkifaeg
     1021 tkgdlqcdaa fsdpeneakr riiftispnt ghvkqspssk hspvpgsarp eggqahgqdg
     1081 kkrgrrkrsn tgnasgnaav spkrkplpsv aglftqpsgs plninsmvnn inqpleitai
     1141 sspenslkns pvpyqdndqp pvlkkekplv qsngvhyspl tsddeqgsed ehnssrierk
     1201 iatislesks pqktvenggs isgrkqaqsn enmnsskwks tfspisdinl tkttdsplqa
     1261 vsalsqnslf afrppsedgl pmdtkvpghp rkslavpsdg lspgtnppng fsyngglsse
     1321 lglhgfmdsa alphkagdgs apncslgfps qrgkdlgvsd tnlflnkrql eglgtkgeel
     1381 srpgvkgkel selsaragga veknsvqhng kvgkgrdrdv efknghnlfi saavssggll
     1441 ngkslstavs sagnpapsvp thhpflntlt tgsqfplgpm alqanlnsvt nssvlqslfn
     1501 smpaaaslvh vssaatrltn shtmgnfspg vtggavggif nhavpsassp hqfgasfsss
     1561 avssstvlsl nplqavasts sssfppsssn lvtssetrpa qhlnrapvqs vfhppppppn
     1621 vslpppppll asnsepallq nlpsippget flpssssapv qpnsslslkl aslqhkpsrp
     1681 sftvhhpplp rvlpqpnaag taamwvtlgm qppyashlsg vkpr
//
LOCUS       XP_041323083            1724 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323083
VERSION     XP_041323083.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467149.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1724
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X1"
                     /calculated_mol_wt=187626
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          499..>652
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1724
                     /gene="DOT1L"
                     /coded_by="XM_041467149.1:120..5294"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsgfsys sgsvavngnl tnspahlnhs vdqaalddsg
      961 slfnsvgsrs stpqhpllmm rnsgqnspaq qhssprlsgp aqslagglqs aeaqkifaeg
     1021 tkgdlqcdaa fsdpeneakr riiftispnt ghvkqspssk hspvpgsarp eggqahgqdg
     1081 kkrgrrkrsn tgnasgnaav spkrkplpsv aglftqpsgs plninsmvnn inqpleitai
     1141 sspenslkns pvpyqdndqp pvlkkekplv qsngvhyspl tsddeqgsed ehnssrierk
     1201 iatislesks pqktvenggs isgrkqaqsn enmnsskwks tfspisdinl tkttdsplqa
     1261 vsalsqnslf afrppsedgl pmdtkvpghp rkslavpsdg lspgtnppng fsyngglsse
     1321 lglhgfmdsa alphkagdgs apncslgfps qrgkdlgvsd tnlflnkrql eglgtkgeel
     1381 srpgvkgkel selsaragga veknsvqhng kvgkgrdrdv efknghnlfi saavssggll
     1441 ngkslstavs sagnpapsvp thhpflntlt tgsqfplgpm alqanlnsvt nssvlqslfn
     1501 smpaaaslvh vssaatrltn shtmgnfspg vtggavggif nhavpsassp hqfgasfsss
     1561 avssstvlsl nplqavasts sssfppsssn lvtssetrpa qhlnrapvqs vfhppppppn
     1621 vslpppppll asnsepallq nlpsippget flpssssapv qpnsslslkl aslqhkpsrp
     1681 sftvhhpplp rvlpqpnaag taamwvtlgm qppyashlsg vkpr
//
LOCUS       XP_041323084            1701 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323084
VERSION     XP_041323084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467150.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1701
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X2"
                     /calculated_mol_wt=185113
     Region          115..294
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Region          451..515
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(463,467,475..476,479..480,482..483,486..487,
                     489..490,493..494,497,500..501,504,507..508,511,514..515)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          476..>629
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1701
                     /gene="DOT1L"
                     /coded_by="XM_041467150.1:120..5225"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm kedigtimrv velsplkgsv swtgkpvsyy lhtidrtile
      301 nyfsslknpk lreeqeaarr rqqrenksnt ttptkvqenk dsgaeeekaa ansvkkpsps
      361 karkkklskk grkmagrkrg rpkkmntast erktkknqta lellhaqtvs qtsssspqda
      421 yksphspfyq lppkvqrhss nqllvtptpp alqklldsfk iqymqfmaym ktpqykaslq
      481 qlleqekekn aqllgtaqql fthcqaqkee ikrlfqqkld elgvkaltyn dliqaqkeis
      541 ahnqqlkeqt kqlekdnsel rnqslqllka rceelkldws tlslenllke kqalknqise
      601 kqkhclelqi siveleksqr qqellqlksy tpseeplsvq lhskshlsrd peaeqgrfql
      661 elecskfpmp hingmspels mnghatpyel qhafsrpssk qntpqypnsh ldqdivpctp
      721 shssrqkadk vtslalpdyt rfspakialr rhlnqdhgin gkataneiqr aehvkenglt
      781 ypspgiangi klspqetrps spaalpsage kvlrertsvs ngetitslpi siplstvqpn
      841 klpvsiplas vvlpsrvekv rstpspvhqs rdsstlekqi gasshngisn aagnkplala
      901 tsgfsyssgs vavngnltns pahlnhsvdq aalddsgslf nsvgsrsstp qhpllmmrns
      961 gqnspaqqhs sprlsgpaqs lagglqsaea qkifaegtkg dlqcdaafsd peneakrrii
     1021 ftispntghv kqspsskhsp vpgsarpegg qahgqdgkkr grrkrsntgn asgnaavspk
     1081 rkplpsvagl ftqpsgspln insmvnninq pleitaissp enslknspvp yqdndqppvl
     1141 kkekplvqsn gvhyspltsd deqgsedehn ssrierkiat isleskspqk tvenggsisg
     1201 rkqaqsnenm nsskwkstfs pisdinltkt tdsplqavsa lsqnslfafr ppsedglpmd
     1261 tkvpghprks lavpsdglsp gtnppngfsy ngglsselgl hgfmdsaalp hkagdgsapn
     1321 cslgfpsqrg kdlgvsdtnl flnkrqlegl gtkgeelsrp gvkgkelsel saraggavek
     1381 nsvqhngkvg kgrdrdvefk nghnlfisaa vssggllngk slstavssag npapsvpthh
     1441 pflntlttgs qfplgpmalq anlnsvtnss vlqslfnsmp aaaslvhvss aatrltnsht
     1501 mgnfspgvtg gavggifnha vpsassphqf gasfsssavs sstvlslnpl qavastssss
     1561 fppsssnlvt ssetrpaqhl nrapvqsvfh ppppppnvsl pppppllasn sepallqnlp
     1621 sippgetflp ssssapvqpn sslslklasl qhkpsrpsft vhhpplprvl pqpnaagtaa
     1681 mwvtlgmqpp yashlsgvkp r
//
LOCUS       XP_041323085            1696 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323085
VERSION     XP_041323085.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467151.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1696
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1696
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X3"
                     /calculated_mol_wt=184576
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          499..>652
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1696
                     /gene="DOT1L"
                     /coded_by="XM_041467151.1:120..5210"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsgfsys sgsvavngnl tnspahlnhs vdqaalddsg
      961 slfnsvgsrs stpqhpllmm rnsgqnspaq qhssprlsgp aqslagglqs aeaqkifaeg
     1021 tkgdlqcdaa fsdpeneakr riiftispnt ghvkqspssk hspvpgsarp eggqahgqdg
     1081 kkrgrrkrsn tgnasgnaav spkrkplpsv aglftqpsgs plninsmdnd qppvlkkekp
     1141 lvqsngvhys pltsddeqgs edehnssrie rkiatisles kspqktveng gsisgrkqaq
     1201 snenmnsskw kstfspisdi nltkttdspl qavsalsqns lfafrppsed glpmdtkvpg
     1261 hprkslavps dglspgtnpp ngfsynggls selglhgfmd saalphkagd gsapncslgf
     1321 psqrgkdlgv sdtnlflnkr qleglgtkge elsrpgvkgk elselsarag gaveknsvqh
     1381 ngkvgkgrdr dvefknghnl fisaavssgg llngkslsta vssagnpaps vpthhpflnt
     1441 lttgsqfplg pmalqanlns vtnssvlqsl fnsmpaaasl vhvssaatrl tnshtmgnfs
     1501 pgvtggavgg ifnhavpsas sphqfgasfs ssavssstvl slnplqavas tssssfppss
     1561 snlvtssetr paqhlnrapv qsvfhppppp pnvslppppp llasnsepal lqnlpsippg
     1621 etflpssssa pvqpnsslsl klaslqhkps rpsftvhhpp lprvlpqpna agtaamwvtl
     1681 gmqppyashl sgvkpr
//
LOCUS       XP_041323086            1670 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323086
VERSION     XP_041323086.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467152.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1670
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X4"
                     /calculated_mol_wt=181411
     Region          61..263
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(108..114,132..133,167..169,187)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          420..484
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(432,436,444..445,448..449,451..452,455..456,
                     458..459,462..463,466,469..470,473,476..477,480,483..484)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          445..>598
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1670
                     /gene="DOT1L"
                     /coded_by="XM_041467152.1:1107..6119"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 menyvlidyd tksfesmqrl cdkynraids ihqlwkgttq pmklntrpsn gllrhilqqv
       61 ynhsvtdpek lnnyepfspe vygetsfdlv aqmideikmt eddlfvdlgs gvgqvvlqva
      121 aatnckhhyg vekadipaky aetmdrefrk wmkwygkkha eytlergdfl seewrerian
      181 tsvifvnnfa fgpevdhqlk erfanmkegg rivsskpfap lnfrinsrnl sdigtimrvv
      241 elsplkgsvs wtgkpvsyyl htidrtilen yfsslknpkl reeqeaarrr qqrenksntt
      301 tptkvqenkd sgaeeekaaa nsvkkpspsk arkkklskkg rkmagrkrgr pkkmntaste
      361 rktkknqtal ellhaqtvsq tsssspqday ksphspfyql ppkvqrhssn qllvtptppa
      421 lqklldsfki qymqfmaymk tpqykaslqq lleqekekna qllgtaqqlf thcqaqkeei
      481 krlfqqklde lgvkaltynd liqaqkeisa hnqqlkeqtk qlekdnselr nqslqllkar
      541 ceelkldwst lslenllkek qalknqisek qkhclelqis iveleksqrq qellqlksyt
      601 pseeplsvql hskshlsrdp eaeqgrfqle lecskfpmph ingmspelsm nghatpyelq
      661 hafsrpsskq ntpqypnshl dqdivpctps hssrqkadkv tslalpdytr fspakialrr
      721 hlnqdhging kataneiqra ehvkenglty pspgiangik lspqetrpss paalpsagek
      781 vlrertsvsn getitslpis iplstvqpnk lpvsiplasv vlpsrvekvr stpspvhqsr
      841 dsstlekqig asshngisna agnkplalat sgfsyssgsv avngnltnsp ahlnhsvdqa
      901 alddsgslfn svgsrsstpq hpllmmrnsg qnspaqqhss prlsgpaqsl agglqsaeaq
      961 kifaegtkgd lqcdaafsdp eneakrriif tispntghvk qspsskhspv pgsarpeggq
     1021 ahgqdgkkrg rrkrsntgna sgnaavspkr kplpsvaglf tqpsgsplni nsmvnninqp
     1081 leitaisspe nslknspvpy qdndqppvlk kekplvqsng vhyspltsdd eqgsedehns
     1141 srierkiati sleskspqkt venggsisgr kqaqsnenmn sskwkstfsp isdinltktt
     1201 dsplqavsal sqnslfafrp psedglpmdt kvpghprksl avpsdglspg tnppngfsyn
     1261 gglsselglh gfmdsaalph kagdgsapnc slgfpsqrgk dlgvsdtnlf lnkrqleglg
     1321 tkgeelsrpg vkgkelsels araggavekn svqhngkvgk grdrdvefkn ghnlfisaav
     1381 ssggllngks lstavssagn papsvpthhp flntlttgsq fplgpmalqa nlnsvtnssv
     1441 lqslfnsmpa aaslvhvssa atrltnshtm gnfspgvtgg avggifnhav psassphqfg
     1501 asfsssavss stvlslnplq avastssssf ppsssnlvts setrpaqhln rapvqsvfhp
     1561 pppppnvslp ppppllasns epallqnlps ippgetflps sssapvqpns slslklaslq
     1621 hkpsrpsftv hhpplprvlp qpnaagtaam wvtlgmqppy ashlsgvkpr
//
LOCUS       XP_041323087            1625 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323087
VERSION     XP_041323087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1625
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X5"
                     /calculated_mol_wt=177379
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          499..>652
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1625
                     /gene="DOT1L"
                     /coded_by="XM_041467153.1:120..4997"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsgfsys sgsvavngnl tnspahlnhs vdqaalddsg
      961 slfnsvgsrs stpqhpllmm rnsgqnspaq qhssprlsgp aqslagglqs aeaqkifaeg
     1021 tkgdlqcdaa fsdpeneakr riiftispnt ghvkqspssk hspvpgsarp eggqahgqdg
     1081 kkrgrrkrsn tgnasgnaav spkrkplpsv aglftqpsgs plninsmvnn inqpleitai
     1141 sspenslkns pvpyqdndqp pvlkkekplv qsngvhyspl tsddeqgsed ehnssrierk
     1201 iatislesks pqktvenggs isgrkqaqsn enmnsskwks tfspisdinl tkttdsplqa
     1261 vsalsqnslf afrppsedgl pmdtkvpghp rkslavpsdg lspgtnppng fsyngglsse
     1321 lglhgfmdsa alphkagdgs apncslgfps qragnpapsv pthhpflntl ttgsqfplgp
     1381 malqanlnsv tnssvlqslf nsmpaaaslv hvssaatrlt nshtmgnfsp gvtggavggi
     1441 fnhavpsass phqfgasfss savssstvls lnplqavast ssssfppsss nlvtssetrp
     1501 aqhlnrapvq svfhpppppp nvslpppppl lasnsepall qnlpsippge tflpssssap
     1561 vqpnsslslk laslqhkpsr psftvhhppl prvlpqpnaa gtaamwvtlg mqppyashls
     1621 gvkpr
//
LOCUS       XP_041323088            1599 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323088
VERSION     XP_041323088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1599
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X6"
                     /calculated_mol_wt=174617
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          499..>652
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1599
                     /gene="DOT1L"
                     /coded_by="XM_041467154.1:120..4919"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsghvkq spsskhspvp gsarpeggqa hgqdgkkrgr
      961 rkrsntgnas gnaavspkrk plpsvaglft qpsgsplnin smvnninqpl eitaisspen
     1021 slknspvpyq dndqppvlkk ekplvqsngv hyspltsdde qgsedehnss rierkiatis
     1081 leskspqktv enggsisgrk qaqsnenmns skwkstfspi sdinltkttd splqavsals
     1141 qnslfafrpp sedglpmdtk vpghprksla vpsdglspgt nppngfsyng glsselglhg
     1201 fmdsaalphk agdgsapncs lgfpsqrgkd lgvsdtnlfl nkrqleglgt kgeelsrpgv
     1261 kgkelselsa raggavekns vqhngkvgkg rdrdvefkng hnlfisaavs sggllngksl
     1321 stavssagnp apsvpthhpf lntlttgsqf plgpmalqan lnsvtnssvl qslfnsmpaa
     1381 aslvhvssaa trltnshtmg nfspgvtgga vggifnhavp sassphqfga sfsssavsss
     1441 tvlslnplqa vastssssfp psssnlvtss etrpaqhlnr apvqsvfhpp ppppnvslpp
     1501 pppllasnse pallqnlpsi ppgetflpss ssapvqpnss lslklaslqh kpsrpsftvh
     1561 hpplprvlpq pnaagtaamw vtlgmqppya shlsgvkpr
//
LOCUS       XP_041323089            1560 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041323089
VERSION     XP_041323089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1560
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X7"
                     /calculated_mol_wt=170777
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          499..>652
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1560
                     /gene="DOT1L"
                     /coded_by="XM_041467155.1:120..4802"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsgfsys sgsvavngnl tnspahlnhs vdqaalddsg
      961 slfnsvgsrs stpqhpllmm rnsgqnspaq qhssprlsgp aqslagglqs aeaqkifaeg
     1021 tkgdlqcdaa fsdpeneakr riiftispnt ghvkqspssk hspvpgsarp eggqahgqdg
     1081 kkrgrrkrsn tgnasgnaav spkrkplpsv aglftqpsgs plninsmvnn inqpleitai
     1141 sspenslkns pvpyqdndqp pvlkkekplv qsngvhyspl tsddeqgsed ehnssrierk
     1201 iatislesks pqktvenggs isgrkqaqsn enmnsskwks tfspisdinl tkttdsplqa
     1261 vsalsqnslf afrppsedgl pmdtkvpghp rkslavpsdg lspgtnppng fsyngglsse
     1321 lglhgfmdsa alphkagdgs apncslgfps qrgkdlgvsd tnlflnkrql eglgtkgeel
     1381 srpgvkgkel selsaragga veknsvqhng kvgkgrdrdv efknghnlfi saavssggll
     1441 ngkslstavs sagnpapsvp thhpflntlt tgsqfplgpm alqanlnsvt nssvlqslfn
     1501 smpaaaslvh vssaatrltn shtmgnfspg vtggavggrq nsfsgirqgl kesltlplqg
//
LOCUS       XP_041323090            1539 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041323090
VERSION     XP_041323090.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467156.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1539
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X8"
                     /calculated_mol_wt=168479
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          499..>652
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..1539
                     /gene="DOT1L"
                     /coded_by="XM_041467156.1:120..4739"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsgfsys sgsvavngnl tnspahlnhs vdqaalddsg
      961 slfnsvgsrs stpqhpllmm rnsgqnspaq qhssprlsgp aqslagglqs aeaqkifaeg
     1021 tkgdlqcdaa fsdpeneakr riiftispnt ghvkqspssk hspvpgsarp eggqahgqdg
     1081 kkrgrrkrsn tgnasgnaav spkrkplpsv aglftqpsgs plninsmvnn inqpleitai
     1141 sspenslkns pvpyqdndqp pvlkkekplv qsngvhyspl tsddeqgsed ehnssrierk
     1201 iatislesks pqktvenggs isgrkqaqsn enmnsskwks tfspisdinl tkttdsplqa
     1261 vsalsqnslf afrppsedgl pmdtkvpghp rkslavpsdg lspgtnppng fsyngglsse
     1321 lglhgfmdsa alphkagdgs apncslgfps qrgkdlgvsd tnlflnkrql eglgtkgeel
     1381 srpgvkgkel selsaragga veknsvqhng kvgkgrdrdv efknghnlfi saavssggll
     1441 ngkslstavs sagnpapsvp thhpflntlt tgsqfplgpm alqanlnsvt nssvlqslfn
     1501 smpaaaslvh vssaatrltn shtmgnfspg vtggavggn
//
LOCUS       XP_041323091            1428 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase, H3 lysine-79 specific isoform
            X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323091
VERSION     XP_041323091.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467157.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1428
                     /product="histone-lysine N-methyltransferase, H3 lysine-79
                     specific isoform X9"
                     /calculated_mol_wt=157590
     Region          115..317
                     /region_name="DOT1"
                     /note="Histone methylation protein DOT1; pfam08123"
                     /db_xref="CDD:149273"
     Site            order(162..168,186..187,221..223,241)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     Region          474..538
                     /region_name="CC_DOT1L"
                     /note="coiled coil domain of disruptor of
                     telomeric-silencing 1-like (DOT1L) and similar proteins;
                     cd20902"
                     /db_xref="CDD:411016"
     Site            order(486,490,498..499,502..503,505..506,509..510,
                     512..513,516..517,520,523..524,527,530..531,534,537..538)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:411016"
     Region          <497..649
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     CDS             1..1428
                     /gene="DOT1L"
                     /coded_by="XM_041467157.1:120..4406"
                     /db_xref="GeneID:121353371"
ORIGIN      
        1 mgerlelrlk spvgaepavy pwplpvydkh hdaaheiiet irwvceeipd lklamenyvl
       61 idydtksfes mqrlcdkynr aidsihqlwk gttqpmklnt rpsngllrhi lqqvynhsvt
      121 dpeklnnyep fspevygets fdlvaqmide ikmteddlfv dlgsgvgqvv lqvaaatnck
      181 hhygvekadi pakyaetmdr efrkwmkwyg kkhaeytler gdflseewre riantsvifv
      241 nnfafgpevd hqlkerfanm keggrivssk pfaplnfrin srnlsdigti mrvvelsplk
      301 gsvswtgkpv syylhtidrt ilenyfsslk npklreeqea arrrqqrenk sntttptkvq
      361 enkdsgaeee kaaansvkkp spskarkkkl skkgrkmagr krgrpkkmnt asterktkkn
      421 qtalellhaq tvsqtssssp qdayksphsp fyqlppkvqr hssnqllvtp tppalqklld
      481 sfkiqymqfm aymktpqyka slqqlleqek eknaqllgta qqlfthcqaq keeikrlfqq
      541 kldelgvkal tyndliqaqk eisahnqqlk eqtkqlekdn selrnqslql lkarceelkl
      601 dwstlslenl lkekqalknq isekqkhcle lqisivelek sqrqqellql ksytpseepl
      661 svqlhskshl srdpeaeqgr fqlelecskf pmphingmsp elsmnghatp yelqhafsrp
      721 sskqntpqyp nshldqdivp ctpshssrqk adkvtslalp dytrfspaki alrrhlnqdh
      781 gingkatane iqraehvken gltypspgia ngiklspqet rpsspaalps agekvlrert
      841 svsngetits lpisiplstv qpnklpvsip lasvvlpsrv ekvrstpspv hqsrdsstle
      901 kqigasshng isnaagnkpl alatsgfsys sgsvavngnl tnspahlnhs vdqaalddsg
      961 slfnsvgsrs stpqhpllmm rnsgqnspaq qhssprlsgp aqslagglqs aeaqkifaeg
     1021 tkgdlqcdaa fsdpeneakr riiftispnt ghvkqspssk hspvpgsarp eggqahgqdg
     1081 kkrgrrkrsn tgnasgnaav spkrkplpsv aglftqpsgs plninsmvnn inqpleitai
     1141 sspenslkns pvpyqdndqp pvlkkekplv qsngvhyspl tsddeqgsed ehnssrierk
     1201 iatislesks pqktvenggs isgrkqaqsn enmnsskwks tfspisdinl tkttdsplqa
     1261 vsalsqnslf afrppsedgl pmdtkvpghp rkslavpsdg lspgtnppng fsyngglsse
     1321 lglhgfmdsa alphkagdgs apncslgfps qrgkdlgvsd tnlflnkrql eglgtkgeel
     1381 srpgvkgkel selsaragga veknsvqhng kqgtqhrlsr rtilsstl
//
LOCUS       XP_041323093              56 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b-c1 complex subunit 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323093
VERSION     XP_041323093.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467159.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..56
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..56
                     /product="cytochrome b-c1 complex subunit 10"
                     /calculated_mol_wt=6164
     Region          2..52
                     /region_name="UCR_6-4kD"
                     /note="Ubiquinol-cytochrome C reductase complex, 6.4kD
                     protein; pfam08997"
                     /db_xref="CDD:462652"
     CDS             1..56
                     /gene="LOC121353373"
                     /coded_by="XM_041467159.1:85..255"
                     /db_xref="GeneID:121353373"
ORIGIN      
        1 mlsqllgpry aqllrtwtpt lvtwggvagv gviwatdwkl vlqyvpyigg kfkted
//
LOCUS       XP_041323094             276 aa            linear   VRT 06-MAY-2021
DEFINITION  methyl-CpG-binding domain protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323094
VERSION     XP_041323094.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467160.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="methyl-CpG-binding domain protein 3 isoform X1"
                     /calculated_mol_wt=30800
     Region          <23..66
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Region          69..135
                     /region_name="MBDa"
                     /note="p55-binding region of Methyl-CpG-binding domain
                     proteins MBD; pfam16564"
                     /db_xref="CDD:465179"
     Region          139..230
                     /region_name="MBD_C"
                     /note="C-terminal domain of methyl-CpG binding protein 2
                     and 3; pfam14048"
                     /db_xref="CDD:464072"
     CDS             1..276
                     /gene="MBD3"
                     /coded_by="XM_041467160.1:167..997"
                     /db_xref="GeneID:121353374"
ORIGIN      
        1 merksafplg qaspgrdrtl shfspsgkkf rskpqlaryl gssmdlgtfd frtgkmlmnk
       61 mnknrqrmry dcsnqakgkp dlntalpvrq tasifkqpvt kitnhpsnkv ksdpqkavdq
      121 prqlfwekkl sglnafdiae elvktmdlpk glqgvgpgct detllsaias alhtstmpit
      181 gqlsaavekn pgvwlntsqp lckafmvtde dirkqeelvq qvrkrleeal madmlahvee
      241 iardgeppse kegaeeegee eeeeeeqdhd qemenv
//
LOCUS       XP_041323095             257 aa            linear   VRT 06-MAY-2021
DEFINITION  methyl-CpG-binding domain protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323095
VERSION     XP_041323095.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467161.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="methyl-CpG-binding domain protein 3 isoform X2"
                     /calculated_mol_wt=28774
     Region          <5..47
                     /region_name="MBD"
                     /note="MeCP2, MBD1, MBD2, MBD3, MBD4, CLLD8-like, and
                     BAZ2A-like proteins constitute a family of proteins that
                     share the methyl-CpG-binding domain (MBD). The MBD
                     consists of about 70 residues and is defined as the
                     minimal region required for binding to...; cl00110"
                     /db_xref="CDD:469618"
     Region          50..116
                     /region_name="MBDa"
                     /note="p55-binding region of Methyl-CpG-binding domain
                     proteins MBD; pfam16564"
                     /db_xref="CDD:465179"
     Region          120..211
                     /region_name="MBD_C"
                     /note="C-terminal domain of methyl-CpG binding protein 2
                     and 3; pfam14048"
                     /db_xref="CDD:464072"
     CDS             1..257
                     /gene="MBD3"
                     /coded_by="XM_041467161.1:167..940"
                     /db_xref="GeneID:121353374"
ORIGIN      
        1 merkspsgkk frskpqlary lgssmdlgtf dfrtgkmlmn kmnknrqrmr ydcsnqakgk
       61 pdlntalpvr qtasifkqpv tkitnhpsnk vksdpqkavd qprqlfwekk lsglnafdia
      121 eelvktmdlp kglqgvgpgc tdetllsaia salhtstmpi tgqlsaavek npgvwlntsq
      181 plckafmvtd edirkqeelv qqvrkrleea lmadmlahve eiardgepps ekegaeeege
      241 eeeeeeeqdh dqemenv
//
LOCUS       XP_041323096             625 aa            linear   VRT 06-MAY-2021
DEFINITION  protein PEAK3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323096
VERSION     XP_041323096.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467162.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..625
                     /product="protein PEAK3"
                     /calculated_mol_wt=68212
     Region          <28..193
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <484..549
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..625
                     /gene="PEAK3"
                     /coded_by="XM_041467162.1:11..1888"
                     /db_xref="GeneID:121353375"
ORIGIN      
        1 mgsarrgwdg qrellrlrdv qleprgtpsl pgtphrarsa llsasldppg pglaapmpdt
       61 pggcpprpps saliysnvge lrahlvprka srgegagrpl pqskpdplpp plpkkqlqra
      121 eslpepgpsq rcrddpepra gsilysipag qlqpgegapp rdrpswapkk pltksqslge
      181 plarsspqka psaslkeltf gtadgelgql lespagvcgv vlgcheasla rlsalmqeel
      241 vgpeerqqll eaelvgkrws afgvldpqpc cqsgdawyfr vgftfehsql qfaakvpkpc
      301 csslgmqsfl gthcsiqrll ghftdrlpre lvlpgipgtq sqgpsreepa cpapqpvlqv
      361 llcaevpqqt ladfvkgsha lhrtspghye rlgcllllql cmglehlrgq nvaqgdlcpe
      421 nlllvqcpcp pqrqkellgl slprllissf fkvqekqrpr sssqeqdwsq alaapsppaa
      481 aelnlgrliy qilhvdisle nilgfrskrl pdipslsiys aglkrlasll lhrdpvqrvs
      541 ieqarailqv llwgprqelf arsrkslell qrwlqvkral lllrfaensv garvspglee
      601 wlccqyfqgi tehtlyqvtq vlyap
//
LOCUS       XP_041323097             216 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323097
VERSION     XP_041323097.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467163.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519208.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="LOW QUALITY PROTEIN: ornithine decarboxylase
                     antizyme 1"
                     /calculated_mol_wt=24206
     Region          125..207
                     /region_name="ODC_AZ"
                     /note="Ornithine decarboxylase antizyme; pfam02100"
                     /db_xref="CDD:460445"
     CDS             1..216
                     /gene="OAZ1"
                     /coded_by="XM_041467163.1:71..721"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121353376"
ORIGIN      
        1 mvksslqril nshcfareke gnkstimpav lslstgqsss rvpfnccsnl gpgprwcsdv
       61 phpplkipgg rgnsqrdhnl sanlfysdnr lnvteeltpn nrtrilnvqs rltdakhisw
      121 ravlnnnnly ieipsgalpe gskdsfavll efaeeqlrve hvficfhknr ddraallrtf
      181 sflgfeivrp ghplvpkrpd acfmaytfer dsaeed
//
LOCUS       XP_041323099             119 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 524-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323099
VERSION     XP_041323099.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467165.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519253.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..119
                     /product="zinc finger protein 524-like"
     Region          40..60
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          52..77
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          68..85
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..119
                     /gene="LOC121353378"
                     /coded_by="XM_041467165.1:<1..361"
                     /codon_start=2
                     /db_xref="GeneID:121353378"
ORIGIN      
        1 gpgggtflli dsqglpytvl laqggaasag papgparfac pdcgrgfayl sylrrhriah
       61 salkphrcra cgkafkrrsh lqrhrgtthg lqgqeghhgq qgqrhsevgh hgqesqqgq
//
LOCUS       XP_041323100              90 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF31-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323100
VERSION     XP_041323100.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467166.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519297.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>90
                     /product="E3 ubiquitin-protein ligase RNF31-like"
     Region          <1..40
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..90
                     /gene="LOC121353379"
                     /coded_by="XM_041467166.1:78..>347"
                     /db_xref="GeneID:121353379"
ORIGIN      
        1 mqwlpgcscp lcpecfrlhf tvglrergvg algcpscgrp dlrddaqrlw ywstlepacs
       61 fgfifeaerg paqcpqchqc ccprcqlpvl
//
LOCUS       XP_041323101            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323101
VERSION     XP_041323101.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467167.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467167.1:708..6182"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323102            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323102
VERSION     XP_041323102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467168.1:1090..6564"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323103            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323103
VERSION     XP_041323103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467169.1:1418..6892"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323104            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323104
VERSION     XP_041323104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467170.1:1604..7078"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323105            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323105
VERSION     XP_041323105.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467171.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467171.1:530..6004"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323107            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323107
VERSION     XP_041323107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467173.1:1036..6510"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323108            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323108
VERSION     XP_041323108.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467174.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467174.1:912..6386"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323109            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323109
VERSION     XP_041323109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467175.1:776..6250"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323110            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323110
VERSION     XP_041323110.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467176.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467176.1:767..6241"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323111            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323111
VERSION     XP_041323111.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467177.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467177.1:980..6454"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323112            1824 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323112
VERSION     XP_041323112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467178.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1824
                     /product="retroelement silencing factor 1 isoform X1"
                     /calculated_mol_wt=200478
     Region          682..1820
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1824
                     /gene="RESF1"
                     /coded_by="XM_041467178.1:589..6063"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vegvkskked wlkcepvkqk kleeistaed sipldtaiqi leghgetlhi
     1801 pvkdskemfq tyrkmylekk mqks
//
LOCUS       XP_041323113            1759 aa            linear   VRT 06-MAY-2021
DEFINITION  retroelement silencing factor 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323113
VERSION     XP_041323113.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467179.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1759
                     /product="retroelement silencing factor 1 isoform X2"
                     /calculated_mol_wt=192879
     Region          682..1745
                     /region_name="DUF4617"
                     /note="Domain of unknown function (DUF4617); pfam15395"
                     /db_xref="CDD:464702"
     CDS             1..1759
                     /gene="RESF1"
                     /coded_by="XM_041467179.1:708..5987"
                     /db_xref="GeneID:121353381"
ORIGIN      
        1 mdwnvrpvqn adantnlqse gacftqllpn ghvfpqtnan ssknacthae nnqivympti
       61 nvafpavnae gfktsdqtsp gasvtgnnff mskysvkrnq qmyvtalkpp iqnsplrpem
      121 tptswpvsnp ysypcrnvpp lssqvntgnn vrnvlgepqy sntsaytvqp emlqhnslrl
      181 atlhqggihp qnnsfplgts gqhvqpqifn snnqckvlys vnqntgmnvq lpqfqqsqma
      241 seaprgcsap sllpancvsr paaqssmgvp qemqnvpngy ninqqrcpld pknapgfnsi
      301 qqhcqkqqcg evsqsirnvc npsgsvtasr sfsestvssp gipkelldvv keiealsskp
      361 lsdpasvpes qtsslmngpv naqisspaat hgvgitkerl aweaeklkcl kkrvvlletv
      421 hnykkkiyhe knshslppsy pcsssnclpc vpkqnvqppa seavrterpt lmvsheernd
      481 knlasadnrr levtqsnppv kqgslsssft avpsqskvpa qfnnpesile qgdvhalass
      541 qgtvtssnna scftqvgssv rsasktlqig penssflqfv lsstnvlkek tagatadkil
      601 tnllcsekpl ldtsvscgsl lkdtseknve slkgerasva htnspasett asgdaqlqte
      661 vaqkkppfte nascsqsncn ysmeelvacl rlwgkyppes vsvenkqsne sptanqvsps
      721 dqktkkgekn nvldsmdeav lpvtttsvgq kldtltsnli knfepqvavv splvlceqrt
      781 lseqagkipt pegktypain sgstcslqee genglnvast akgtienaws spsdcvleqk
      841 vdsdlqqirv gdenqrkvsq saqdargnlq lglqnkaplp esgtnfcsqi sqvgtrdhed
      901 kqavleagdt stavlesdml cissvcslve gdkfynpqia gmfksvyetl esegnasgtr
      961 qkeqhpdlnk telsnntaqr eslllkmlee ssshlekess gnppkavsas eqntsfkass
     1021 khpenslesp anikqklaqn sldssvsita ktnapavpgd rskqnsmpsk nsmekevnfl
     1081 gakpskylkd qllalvkefp ygiegadvlt keaaqnhsva egtenqsqke vkicdknshl
     1141 kdpvnqtkia vlrsdqvqel spahnqcpss dskrevrqqs ekapadkdnf essvqpsqdl
     1201 cekektpqet snpseksedr sltggvsvay ktphcpsqle tsgsekndcq lskaentdsa
     1261 eteennsqsd alkkencvvg gdltisekip enisknkgic kytsemnkkp rpkvdneykl
     1321 pttkqekigp vnsfesqdad kckssslkeh lqidkgtqvs skelnsfkke hqtaseelpe
     1381 ktdhtyadnm aklpikkerv fktgslsndt tkpgltmksk pdihqtvkse tveikqsevs
     1441 qgqkkknceg nsteeqscre qkevlrqdvg isvkeqakla aemkhkklss yradavkfsd
     1501 sstvdfklrh tkysqhkslk vhplqeqphk rkmkenmvgk refkkaklee eglkqskgks
     1561 skqlvhncll nadkakklng engwkprssl adcsvlklqr krarsssmsr nffsskerhl
     1621 dgqnkdkcse kmfpdknlly lnrrnnrlkl hlqkepkkhy lnrvafkrta qerisltkle
     1681 tspvrpvwhr ttkvsqssns kkdvsvstve ksckqevlef klcpeilfrn papgeeslaa
     1741 knsperdkvv vedhscvfs
//
LOCUS       XP_041323114            1048 aa            linear   VRT 06-MAY-2021
DEFINITION  importin-8 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323114
VERSION     XP_041323114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1048
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1048
                     /product="importin-8 isoform X1"
                     /calculated_mol_wt=120400
     Region          15..907
                     /region_name="SXM1"
                     /note="Importin, protein involved in nuclear import
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5656"
                     /db_xref="CDD:227943"
     CDS             1..1048
                     /gene="IPO8"
                     /coded_by="XM_041467180.1:105..3251"
                     /db_xref="GeneID:121353382"
ORIGIN      
        1 mdpnriiqal kgtidpklrv aaenelnqsy kiinfapsll qiivsdqvef pvrqaaaiyl
       61 knmvtqywpd repppgeavf pfnihendrq qirdnivegi irspdlvraq ltmclraiik
      121 hdfpghwtav vdkigyylqs pnsgnwlgsl lclyqlvkty eykkaeerdp liaamqiflp
      181 riqqqmiqll pdnshysvll qkqilkifya lvqyalplql vnnqtmtqwm eifrtiidrn
      241 vpletlqide ddrpelvwwk ckkwalhiva rlferygspg nvtkeyfefs dfflktyavg
      301 iqqvllrild qyrqkdyvap rvlqqtlnyl nqgvihsitw kqmkphiqti teevifslmc
      361 ykdedeelwq edpyeyirmk fdvfedyast ttaaqnllyt aakkrkevlp kmmaycyqil
      421 tepnidprkk dgalhvigsl adillkksvf kdqmelmlqn hvfplfmsnl gylrarscwv
      481 lhsfsalkfh nelnlrnave lakksliddk empvkveaai alqtlisnqe qakeyvkpyv
      541 rpvmqellhi vretenddlt nviqkmiyey sqevatiavd mtqhlaeifg kvlqseeyee
      601 vedktvmamg ilhtidtilt vvedhkeitq qlesiclqii glvlqkhvie fyeeilslaf
      661 sltcqmispq mwqllgvlye vfqqdcfeyf admmpllhny vtidtdtlls npkhleiiys
      721 mckkvltgda gedaechaak llevivlqck grgidqcipl fveavlerlt rgvktselrt
      781 mclqvaiaal yynpdlllht lenirfphnp epitaqfinq wmndtdcffg lhdrkmciig
      841 lsilmelqnr ppavdavaaq ivpsilllfl glkqvcasre ltehedqakd ekhfaednee
      901 ipsdedetne vsqamqenhs gggggsaggg eeededdddd ddwdedalee talegfstpl
      961 dlengvdeyq fftqalltvq srdaawyhsl taplsedqkk qlqeiytlae hrrtaaetkt
     1021 ieqpsgytfd nkglitafnf agntpggn
//
LOCUS       XP_041323115            1023 aa            linear   VRT 06-MAY-2021
DEFINITION  importin-8 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323115
VERSION     XP_041323115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1023
                     /product="importin-8 isoform X2"
                     /calculated_mol_wt=117742
     Region          15..907
                     /region_name="SXM1"
                     /note="Importin, protein involved in nuclear import
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5656"
                     /db_xref="CDD:227943"
     CDS             1..1023
                     /gene="IPO8"
                     /coded_by="XM_041467181.1:105..3176"
                     /db_xref="GeneID:121353382"
ORIGIN      
        1 mdpnriiqal kgtidpklrv aaenelnqsy kiinfapsll qiivsdqvef pvrqaaaiyl
       61 knmvtqywpd repppgeavf pfnihendrq qirdnivegi irspdlvraq ltmclraiik
      121 hdfpghwtav vdkigyylqs pnsgnwlgsl lclyqlvkty eykkaeerdp liaamqiflp
      181 riqqqmiqll pdnshysvll qkqilkifya lvqyalplql vnnqtmtqwm eifrtiidrn
      241 vpletlqide ddrpelvwwk ckkwalhiva rlferygspg nvtkeyfefs dfflktyavg
      301 iqqvllrild qyrqkdyvap rvlqqtlnyl nqgvihsitw kqmkphiqti teevifslmc
      361 ykdedeelwq edpyeyirmk fdvfedyast ttaaqnllyt aakkrkevlp kmmaycyqil
      421 tepnidprkk dgalhvigsl adillkksvf kdqmelmlqn hvfplfmsnl gylrarscwv
      481 lhsfsalkfh nelnlrnave lakksliddk empvkveaai alqtlisnqe qakeyvkpyv
      541 rpvmqellhi vretenddlt nviqkmiyey sqevatiavd mtqhlaeifg kvlqseeyee
      601 vedktvmamg ilhtidtilt vvedhkeitq qlesiclqii glvlqkhvie fyeeilslaf
      661 sltcqmispq mwqllgvlye vfqqdcfeyf admmpllhny vtidtdtlls npkhleiiys
      721 mckkvltgda gedaechaak llevivlqck grgidqcipl fveavlerlt rgvktselrt
      781 mclqvaiaal yynpdlllht lenirfphnp epitaqfinq wmndtdcffg lhdrkmciig
      841 lsilmelqnr ppavdavaaq ivpsilllfl glkqvcasre ltehedqakd ekhfaednee
      901 ipsdedetne vsqamqenhs gggggsaggg eeededdddd ddwdedalee talegfstpl
      961 dlengvdeyq fftqalltvq srdaawyhsl taplsedqkk qlqeiytlae hrrtaagsvn
     1021 ris
//
LOCUS       XP_041323116             912 aa            linear   VRT 06-MAY-2021
DEFINITION  importin-8 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323116
VERSION     XP_041323116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="importin-8 isoform X3"
                     /calculated_mol_wt=105630
     Region          15..897
                     /region_name="SXM1"
                     /note="Importin, protein involved in nuclear import
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5656"
                     /db_xref="CDD:227943"
     CDS             1..912
                     /gene="IPO8"
                     /coded_by="XM_041467182.1:105..2843"
                     /db_xref="GeneID:121353382"
ORIGIN      
        1 mdpnriiqal kgtidpklrv aaenelnqsy kiinfapsll qiivsdqvef pvrqaaaiyl
       61 knmvtqywpd repppgeavf pfnihendrq qirdnivegi irspdlvraq ltmclraiik
      121 hdfpghwtav vdkigyylqs pnsgnwlgsl lclyqlvkty eykkaeerdp liaamqiflp
      181 riqqqmiqll pdnshysvll qkqilkifya lvqyalplql vnnqtmtqwm eifrtiidrn
      241 vpletlqide ddrpelvwwk ckkwalhiva rlferygspg nvtkeyfefs dfflktyavg
      301 iqqvllrild qyrqkdyvap rvlqqtlnyl nqgvihsitw kqmkphiqti teevifslmc
      361 ykdedeelwq edpyeyirmk fdvfedyast ttaaqnllyt aakkrkevlp kmmaycyqil
      421 tepnidprkk dgalhvigsl adillkksvf kdqmelmlqn hvfplfmsnl gylrarscwv
      481 lhsfsalkfh nelnlrnave lakksliddk empvkveaai alqtlisnqe qakeyvkpyv
      541 rpvmqellhi vretenddlt nviqkmiyey sqevatiavd mtqhlaeifg kvlqseeyee
      601 vedktvmamg ilhtidtilt vvedhkeitq qlesiclqii glvlqkhvie fyeeilslaf
      661 sltcqmispq mwqllgvlye vfqqdcfeyf admmpllhny vtidtdtlls npkhleiiys
      721 mckkvltgda gedaechaak llevivlqck grgidqcipl fveavlerlt rgvktselrt
      781 mclqvaiaal yynpdlllht lenirfphnp epitaqfinq wmndtdcffg lhdrkmciig
      841 lsilmelqnr ppavdavaaq ivpsilllfl glkqvcasre ltehedqakd ekhfaedngk
      901 ispfhivdfv wi
//
LOCUS       XP_041323117            1356 aa            linear   VRT 06-MAY-2021
DEFINITION  DENN domain-containing protein 5B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323117
VERSION     XP_041323117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1356
                     /product="DENN domain-containing protein 5B isoform X1"
                     /calculated_mol_wt=154174
     Region          13..137
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          204..392
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          515..590
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          809..1014
                     /region_name="RUN1_DENND5B"
                     /note="RUN1 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17691"
                     /db_xref="CDD:439053"
     Site            order(826,830,833,837,840,989,993,996..997,999,1003..1004)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:439053"
     Region          1018..1126
                     /region_name="PLAT_RAB6IP1"
                     /note="PLAT/LH2 domain present in RAB6 interacting protein
                     1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an
                     eight stranded beta-barrel. In RabIP1 this domain may
                     participate in lipid-mediated modulation of Rab6IP1's
                     function via it's generally proposed...; cd01757"
                     /db_xref="CDD:238855"
     Region          1173..1351
                     /region_name="RUN2_DENND5B"
                     /note="RUN2 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17693"
                     /db_xref="CDD:439055"
     CDS             1..1356
                     /gene="DENND5B"
                     /coded_by="XM_041467183.1:30..4100"
                     /db_xref="GeneID:121353383"
ORIGIN      
        1 msgsgnpgpg aapcrfahyf vlcgidaesg lepdelavly qylqadlhgk ssdtadktsg
       61 enfdqsplrr tfkskvlahy pqniewnpfd qdavnmlcmp kglsfrtqad nrdpqlhsfi
      121 itredgsrty gfvltfyeev tskqictamq tlyqmhnaeq yssvcasssc smdslassid
      181 egdatslakl qrynsydisr dtlyvskcic litplpfmqa ckkfliqlyk avtsqqpppl
      241 plesyihnil yevpmpppgr slkfygvyep iicqrpgpne lplsdyplre vfellglenl
      301 vqvftcvlle mqillysqdy qrlmtvaegi ttllfpfqwq hvyvpilpas llhfldapvp
      361 ylmglqskeg tdrsklelpq eanlcfvdid nhfielpeef pqfpnklefi qeisevllqf
      421 gippegnlhc sdsatklknl vlsdlvndkk ngnipsnaln myellkgnet iarlqalakr
      481 tgvtmekmti ttpltdkkdg klsceelelr dyklnvqlre vfanrftqmf adyeafviqa
      541 spdmeswltn reqmqnfdka sflsdqpepy lpflshfiet qmfatfidnk imsqweekdp
      601 flrvfdsrie kirlynvrap alrtsnyqkc stlkeaghls iqrlvladiv apephflsce
      661 kqqtdtqsie qrlmkidhta ihphlldmki gqgkyeqgff pklqsdvlat gptnnnrwas
      721 rsattqrrkd rlrqhsehig ldndmrepse elllrqnsma fwewdqgppp parppkksfs
      781 ecclkymqea rslgknlrqp klsdlspavi aqtnwkfveg llkecrmktk rmlvekmghe
      841 avelghgean itgleentli aslcdlleri wshglqvkqg ksalwshllq yqereekqeh
      901 saespvgggt errksdtgii lptlrvsliq dmrhvqnmse iktdvgrara wirlslekkl
      961 lsqhlkqlls nqtlakklyk ryaflrceee reqflyhlls lnavdyfcft svfttimipy
     1021 rsviipikkl snaittsnpw icvsgelgds gvmqipknhl emtfecqnlg klttvqighd
     1081 nsgllakwlv dcvmvrneit ghtykfpcgr wlgkgvddgs leriligelv sstsdeelgk
     1141 qcrtppqqks ptvtrrlsit sltgrntkpn agqiqegige avnnivkhfh kpekergslt
     1201 illcgenglv aaleqvfhhg fksarifhkn vfiwdfieka vayfetsdqi gdneealllq
     1261 rsscktfchy vnaintaprn igkdgkfqil vclgtrdhll pqwipllaec ppitrmyeen
     1321 allrdrmtvn slirvlqtlq dfniilegsl ikgvdv
//
LOCUS       XP_041323118            1334 aa            linear   VRT 06-MAY-2021
DEFINITION  DENN domain-containing protein 5B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323118
VERSION     XP_041323118.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467184.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1334
                     /product="DENN domain-containing protein 5B isoform X2"
                     /calculated_mol_wt=151751
     Region          13..115
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          182..370
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          493..568
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          787..992
                     /region_name="RUN1_DENND5B"
                     /note="RUN1 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17691"
                     /db_xref="CDD:439053"
     Site            order(804,808,811,815,818,967,971,974..975,977,981..982)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:439053"
     Region          996..1104
                     /region_name="PLAT_RAB6IP1"
                     /note="PLAT/LH2 domain present in RAB6 interacting protein
                     1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an
                     eight stranded beta-barrel. In RabIP1 this domain may
                     participate in lipid-mediated modulation of Rab6IP1's
                     function via it's generally proposed...; cd01757"
                     /db_xref="CDD:238855"
     Region          1151..1329
                     /region_name="RUN2_DENND5B"
                     /note="RUN2 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17693"
                     /db_xref="CDD:439055"
     CDS             1..1334
                     /gene="DENND5B"
                     /coded_by="XM_041467184.1:30..4034"
                     /db_xref="GeneID:121353383"
ORIGIN      
        1 msgsgnpgpg aapcrfahyf vlcgidaesg lepdelagen fdqsplrrtf kskvlahypq
       61 niewnpfdqd avnmlcmpkg lsfrtqadnr dpqlhsfiit redgsrtygf vltfyeevts
      121 kqictamqtl yqmhnaeqys svcassscsm dslassideg datslaklqr ynsydisrdt
      181 lyvskcicli tplpfmqack kfliqlykav tsqqppplpl esyihnilye vpmpppgrsl
      241 kfygvyepii cqrpgpnelp lsdyplrevf ellglenlvq vftcvllemq illysqdyqr
      301 lmtvaegitt llfpfqwqhv yvpilpasll hfldapvpyl mglqskegtd rsklelpqea
      361 nlcfvdidnh fielpeefpq fpnklefiqe isevllqfgi ppegnlhcsd satklknlvl
      421 sdlvndkkng nipsnalnmy ellkgnetia rlqalakrtg vtmekmtitt pltdkkdgkl
      481 sceelelrdy klnvqlrevf anrftqmfad yeafviqasp dmeswltnre qmqnfdkasf
      541 lsdqpepylp flshfietqm fatfidnkim sqweekdpfl rvfdsrieki rlynvrapal
      601 rtsnyqkcst lkeaghlsiq rlvladivap ephflscekq qtdtqsieqr lmkidhtaih
      661 phlldmkigq gkyeqgffpk lqsdvlatgp tnnnrwasrs attqrrkdrl rqhsehigld
      721 ndmrepseel llrqnsmafw ewdqgppppa rppkksfsec clkymqears lgknlrqpkl
      781 sdlspaviaq tnwkfvegll kecrmktkrm lvekmgheav elghgeanit gleentlias
      841 lcdlleriws hglqvkqgks alwshllqyq ereekqehsa espvgggter rksdtgiilp
      901 tlrvsliqdm rhvqnmseik tdvgrarawi rlslekklls qhlkqllsnq tlakklykry
      961 aflrceeere qflyhllsln avdyfcftsv fttimipyrs viipikklsn aittsnpwic
     1021 vsgelgdsgv mqipknhlem tfecqnlgkl ttvqighdns gllakwlvdc vmvrneitgh
     1081 tykfpcgrwl gkgvddgsle riligelvss tsdeelgkqc rtppqqkspt vtrrlsitsl
     1141 tgrntkpnag qiqegigeav nnivkhfhkp ekergsltil lcgenglvaa leqvfhhgfk
     1201 sarifhknvf iwdfiekava yfetsdqigd neealllqrs scktfchyvn aintaprnig
     1261 kdgkfqilvc lgtrdhllpq wipllaecpp itrmyeenal lrdrmtvnsl irvlqtlqdf
     1321 niilegslik gvdv
//
LOCUS       XP_041323119            1290 aa            linear   VRT 06-MAY-2021
DEFINITION  DENN domain-containing protein 5B isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323119
VERSION     XP_041323119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1290
                     /product="DENN domain-containing protein 5B isoform X3"
                     /calculated_mol_wt=146661
     Region          13..137
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          204..392
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          515..590
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          743..948
                     /region_name="RUN1_DENND5B"
                     /note="RUN1 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17691"
                     /db_xref="CDD:439053"
     Site            order(760,764,767,771,774,923,927,930..931,933,937..938)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:439053"
     Region          952..1060
                     /region_name="PLAT_RAB6IP1"
                     /note="PLAT/LH2 domain present in RAB6 interacting protein
                     1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an
                     eight stranded beta-barrel. In RabIP1 this domain may
                     participate in lipid-mediated modulation of Rab6IP1's
                     function via it's generally proposed...; cd01757"
                     /db_xref="CDD:238855"
     Region          1107..1285
                     /region_name="RUN2_DENND5B"
                     /note="RUN2 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17693"
                     /db_xref="CDD:439055"
     CDS             1..1290
                     /gene="DENND5B"
                     /coded_by="XM_041467185.1:30..3902"
                     /db_xref="GeneID:121353383"
ORIGIN      
        1 msgsgnpgpg aapcrfahyf vlcgidaesg lepdelavly qylqadlhgk ssdtadktsg
       61 enfdqsplrr tfkskvlahy pqniewnpfd qdavnmlcmp kglsfrtqad nrdpqlhsfi
      121 itredgsrty gfvltfyeev tskqictamq tlyqmhnaeq yssvcasssc smdslassid
      181 egdatslakl qrynsydisr dtlyvskcic litplpfmqa ckkfliqlyk avtsqqpppl
      241 plesyihnil yevpmpppgr slkfygvyep iicqrpgpne lplsdyplre vfellglenl
      301 vqvftcvlle mqillysqdy qrlmtvaegi ttllfpfqwq hvyvpilpas llhfldapvp
      361 ylmglqskeg tdrsklelpq eanlcfvdid nhfielpeef pqfpnklefi qeisevllqf
      421 gippegnlhc sdsatklknl vlsdlvndkk ngnipsnaln myellkgnet iarlqalakr
      481 tgvtmekmti ttpltdkkdg klsceelelr dyklnvqlre vfanrftqmf adyeafviqa
      541 spdmeswltn reqmqnfdka sflsdqpepy lpflshfiet qmfatfidnk imsqweekdp
      601 flrvfdsrie kirlynvrap alrtsnyqkc stlkeaaqsi eqrlmkidht aihphlldmk
      661 igqgkyeqgf fpklqsdvla tgptnnnrwa srsattqrrk drlrqhsehi gldndmreky
      721 mqearslgkn lrqpklsdls paviaqtnwk fvegllkecr mktkrmlvek mgheavelgh
      781 geanitglee ntliaslcdl leriwshglq vkqgksalws hllqyqeree kqehsaespv
      841 gggterrksd tgiilptlrv sliqdmrhvq nmseiktdvg rarawirlsl ekkllsqhlk
      901 qllsnqtlak klykryaflr ceeereqfly hllslnavdy fcftsvftti mipyrsviip
      961 ikklsnaitt snpwicvsge lgdsgvmqip knhlemtfec qnlgklttvq ighdnsglla
     1021 kwlvdcvmvr neitghtykf pcgrwlgkgv ddgslerili gelvsstsde elgkqcrtpp
     1081 qqksptvtrr lsitsltgrn tkpnagqiqe gigeavnniv khfhkpeker gsltillcge
     1141 nglvaaleqv fhhgfksari fhknvfiwdf iekavayfet sdqigdneea lllqrssckt
     1201 fchyvnaint aprnigkdgk fqilvclgtr dhllpqwipl laecppitrm yeenallrdr
     1261 mtvnslirvl qtlqdfniil egslikgvdv
//
LOCUS       XP_041323120            1268 aa            linear   VRT 06-MAY-2021
DEFINITION  DENN domain-containing protein 5B isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323120
VERSION     XP_041323120.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467186.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1268
                     /product="DENN domain-containing protein 5B isoform X4"
                     /calculated_mol_wt=144238
     Region          13..115
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          182..370
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          493..568
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          721..926
                     /region_name="RUN1_DENND5B"
                     /note="RUN1 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17691"
                     /db_xref="CDD:439053"
     Site            order(738,742,745,749,752,901,905,908..909,911,915..916)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:439053"
     Region          930..1038
                     /region_name="PLAT_RAB6IP1"
                     /note="PLAT/LH2 domain present in RAB6 interacting protein
                     1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an
                     eight stranded beta-barrel. In RabIP1 this domain may
                     participate in lipid-mediated modulation of Rab6IP1's
                     function via it's generally proposed...; cd01757"
                     /db_xref="CDD:238855"
     Region          1085..1263
                     /region_name="RUN2_DENND5B"
                     /note="RUN2 domain found in DENN domain-containing protein
                     5B (DENND5B) and similar proteins; cd17693"
                     /db_xref="CDD:439055"
     CDS             1..1268
                     /gene="DENND5B"
                     /coded_by="XM_041467186.1:30..3836"
                     /db_xref="GeneID:121353383"
ORIGIN      
        1 msgsgnpgpg aapcrfahyf vlcgidaesg lepdelagen fdqsplrrtf kskvlahypq
       61 niewnpfdqd avnmlcmpkg lsfrtqadnr dpqlhsfiit redgsrtygf vltfyeevts
      121 kqictamqtl yqmhnaeqys svcassscsm dslassideg datslaklqr ynsydisrdt
      181 lyvskcicli tplpfmqack kfliqlykav tsqqppplpl esyihnilye vpmpppgrsl
      241 kfygvyepii cqrpgpnelp lsdyplrevf ellglenlvq vftcvllemq illysqdyqr
      301 lmtvaegitt llfpfqwqhv yvpilpasll hfldapvpyl mglqskegtd rsklelpqea
      361 nlcfvdidnh fielpeefpq fpnklefiqe isevllqfgi ppegnlhcsd satklknlvl
      421 sdlvndkkng nipsnalnmy ellkgnetia rlqalakrtg vtmekmtitt pltdkkdgkl
      481 sceelelrdy klnvqlrevf anrftqmfad yeafviqasp dmeswltnre qmqnfdkasf
      541 lsdqpepylp flshfietqm fatfidnkim sqweekdpfl rvfdsrieki rlynvrapal
      601 rtsnyqkcst lkeaaqsieq rlmkidhtai hphlldmkig qgkyeqgffp klqsdvlatg
      661 ptnnnrwasr sattqrrkdr lrqhsehigl dndmrekymq earslgknlr qpklsdlspa
      721 viaqtnwkfv egllkecrmk tkrmlvekmg heavelghge anitgleent liaslcdlle
      781 riwshglqvk qgksalwshl lqyqereekq ehsaespvgg gterrksdtg iilptlrvsl
      841 iqdmrhvqnm seiktdvgra rawirlslek kllsqhlkql lsnqtlakkl ykryaflrce
      901 eereqflyhl lslnavdyfc ftsvfttimi pyrsviipik klsnaittsn pwicvsgelg
      961 dsgvmqipkn hlemtfecqn lgklttvqig hdnsgllakw lvdcvmvrne itghtykfpc
     1021 grwlgkgvdd gslerilige lvsstsdeel gkqcrtppqq ksptvtrrls itsltgrntk
     1081 pnagqiqegi geavnnivkh fhkpekergs ltillcgeng lvaaleqvfh hgfksarifh
     1141 knvfiwdfie kavayfetsd qigdneeall lqrsscktfc hyvnaintap rnigkdgkfq
     1201 ilvclgtrdh llpqwiplla ecppitrmye enallrdrmt vnslirvlqt lqdfniileg
     1261 slikgvdv
//
LOCUS       XP_041323121             142 aa            linear   VRT 06-MAY-2021
DEFINITION  protein bicaudal D homolog 1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323121
VERSION     XP_041323121.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467187.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>142
                     /product="protein bicaudal D homolog 1-like"
     Region          14..>72
                     /region_name="hsdR"
                     /note="type I restriction enzyme EcoKI subunit R;
                     Provisional; PRK11448"
                     /db_xref="CDD:236912"
     Region          74..>142
                     /region_name="BicD"
                     /note="Microtubule-associated protein Bicaudal-D;
                     pfam09730"
                     /db_xref="CDD:462863"
     CDS             1..142
                     /gene="LOC121353384"
                     /coded_by="XM_041467187.1:169..>594"
                     /db_xref="GeneID:121353384"
ORIGIN      
        1 maaeevlqga dhykseierl trelsetthe kiqaaeyglv vleekltlkq qydeleaeyd
       61 glkqeleqlk eafgqsfsvh rkvaedgetr eetllqesas keayylgkil emqnelkqsr
      121 avvtnvqaen erltaivqdl ke
//
LOCUS       XP_041323122             122 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: histone H3-like centromeric protein A
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323122
VERSION     XP_041323122.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467188.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..122
                     /product="LOW QUALITY PROTEIN: histone H3-like centromeric
                     protein A"
                     /calculated_mol_wt=13796
     Site            order(23..29,31,45..48,51,54,67..70,100..102,104)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:467036"
     Region          24..119
                     /region_name="HFD_SF"
                     /note="histone fold domain (HFD) superfamily; cl45933"
                     /db_xref="CDD:480273"
     Site            order(26,29,32..33,36..37,39,41,43..44,48..49,51..53,
                     55..56,58,60,65..69,71..72,75..76,79..81,83..85,87..89,92,
                     101..105,109,112)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(30,33..34,37..38,40,78,82,85,92,96,101)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     Site            order(90,93..94,97..98,100,106..107,110..111,113..115)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467036"
     CDS             1..122
                     /gene="LOC121353385"
                     /coded_by="XM_041467188.1:188..556"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121353385"
ORIGIN      
        1 mprpkptprr rggppypmpx agrrpgqlal qeirkyqkst clllrpgpfa rlvrelclvf
       61 trgvdyrwqr malvalqeat eafmvrlled aylcslharr vtlypkdlql arrlrgpetg
      121 gi
//
LOCUS       XP_041323123             129 aa            linear   VRT 06-MAY-2021
DEFINITION  SIN3-HDAC complex-associated factor [Pyrgilauda ruficollis].
ACCESSION   XP_041323123
VERSION     XP_041323123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467189.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="SIN3-HDAC complex-associated factor"
                     /calculated_mol_wt=14840
     Region          2..>120
                     /region_name="FAM60A"
                     /note="Protein Family FAM60A; pfam15396"
                     /db_xref="CDD:464703"
     CDS             1..129
                     /gene="SINHCAF"
                     /coded_by="XM_041467189.1:400..789"
                     /db_xref="GeneID:121353386"
ORIGIN      
        1 mfgfhkpkmy rsiegccicr akssssrftd skryekdfqn cfglhearsg dicnacvllv
       61 krwkklpags kknwnhvvda ragpslkttl kpkkmktlsg sriksnqisk lqkefkrhne
      121 lqqfernif
//
LOCUS       XP_041323124             261 aa            linear   VRT 06-MAY-2021
DEFINITION  protein AMN1 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323124
VERSION     XP_041323124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="protein AMN1 homolog isoform X1"
                     /calculated_mol_wt=28686
     Region          40..260
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          90..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          120..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          146..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          172..197
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          199..224
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..261
                     /gene="AMN1"
                     /coded_by="XM_041467190.1:84..869"
                     /db_xref="GeneID:121353389"
ORIGIN      
        1 mswdgageev rllldlclqc ltknlsrysa dikslppnik dkliklmsrq gqitdanise
       61 vlhpavesld lrdcdisdka llqlchckql kkinlnscke nrfgitsegv ialalsspyl
      121 reasfkrccd itdrgvlala lncqflqivn lgscsgitda slqalgenck flhsvdfsst
      181 qvtddgvval vsgtcsnnlk eihmercvnl tdvaveavlt ccpkihiflf hgcplitdrs
      241 rdaleqliis nkikqltwtv y
//
LOCUS       XP_041323125             215 aa            linear   VRT 06-MAY-2021
DEFINITION  protein AMN1 homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323125
VERSION     XP_041323125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467191.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="protein AMN1 homolog isoform X2"
                     /calculated_mol_wt=23501
     Region          1..214
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          20..43
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          44..73
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          74..99
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          100..125
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          126..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          153..178
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..215
                     /gene="AMN1"
                     /coded_by="XM_041467191.1:190..837"
                     /db_xref="GeneID:121353389"
ORIGIN      
        1 msrqgqitda nisevlhpav esldlrdcdi sdkallqlch ckqlkkinln sckenrfgit
       61 segvialals spylreasfk rccditdrgv lalalncqfl qivnlgscsg itdaslqalg
      121 enckflhsvd fsstqvtddg vvalvsgtcs nnlkeihmer cvnltdvave avltccpkih
      181 iflfhgcpli tdrsrdaleq liisnkikql twtvy
//
LOCUS       XP_041323126            1172 aa            linear   VRT 06-MAY-2021
DEFINITION  caprin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323126
VERSION     XP_041323126.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467192.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1172
                     /product="caprin-2"
                     /calculated_mol_wt=131402
     Region          143..258
                     /region_name="Caprin-1_dimer"
                     /note="Caprin-1 dimerization domain; pfam18293"
                     /db_xref="CDD:436391"
     Region          <274..551
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          619..980
                     /region_name="Caprin-1_C"
                     /note="Cytoplasmic activation/proliferation-associated
                     protein-1 C term; pfam12287"
                     /db_xref="CDD:463522"
     Region          1044..1169
                     /region_name="C1q"
                     /note="C1q domain; pfam00386"
                     /db_xref="CDD:395310"
     CDS             1..1172
                     /gene="CAPRIN2"
                     /coded_by="XM_041467192.1:11..3529"
                     /db_xref="GeneID:121353390"
ORIGIN      
        1 mvrlsqapfh rpsspsgrse egeekrmkaa kqqvtpages papasplqsa lstaaspsqa
       61 yeiyidngli clkhkirnie kkklkledyk drlkkgealn qdqleaveky devvhnlefa
      121 kelqktfsgl sqdllkaqkk aqrresllkl eaekkklrti lqvqyvlqnf tqehvqkdfk
      181 ggvngaiylp skeldylirf akltcperne nlsvedqmeq sslyfwdlle gsekpvvgtt
      241 ykhmkdllsk lldsgyfesi ptprttvpvk eleeevnrkp ektrqlskge sakesesime
      301 lmkseiqpqe flnrrylpea eysvkkkaee prsweaecar kqeppkswem lvdikeqeqk
      361 qkqetlkpwe arvrqqelkr pdspkpwear vreeeqkces akswescvee eqqkkpeapk
      421 awvarvqeeq espkpwvakv reeqdqkkqe spkpwvtkvr eeqeqkkqes skpwvtkvke
      481 epeekqespk pwvtqtreqp eqkkpdpvkt wevpvreepe kqepvkawaa hvreepeqkk
      541 qetreaweka drqqqvsspq lqnppkswaa asmgpkeqmg pkkfdmepke vpkpahqpaa
      601 efcststlpk dpvlrreklq dlmtqiqgty nfmqesildf dkaspsaigs sqppsvtpas
      661 spvaskeqkl psqsdflqqp lqaaassmvl hgsntslasa dhalsgsete dlvtpqasts
      721 lsqenekyts qplyqtssri seplipkkia iaqatiplps epqsplptss tpvpsvppaq
      781 sfqsppasss svtitaapfq amqtvfkvna plpprkdqei kedssysagy nqsfstastq
      841 tppqcqlqss hvaehtslsq eslssavnyq pdgavpvsng slafypaqan viprppqpyl
      901 nsrgsvrgsa rggrslansy rspagykgfd ayrgspsltn gnygqlqfpg rdyagmpysq
      961 rdvnyqqcyk rggissgpra nsragwsdss qvssperdne tfnsgdsgqg dsrsitpvdm
     1021 pvtsqaatil pvhvyplpqq mrvafsaart snlapgtldq pivfdlllnn lgetfdiqlg
     1081 rfncpvngty vfifhmlkla vnvplyvnlm kneevlvsay andgapdhet asnhavlqlf
     1141 qgdqiwlrlh rgaiygsswk ystfsgylly qd
//
LOCUS       XP_041323127             269 aa            linear   VRT 06-MAY-2021
DEFINITION  electron transfer flavoprotein beta subunit lysine
            methyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041323127
VERSION     XP_041323127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="electron transfer flavoprotein beta subunit
                     lysine methyltransferase"
                     /calculated_mol_wt=30435
     Region          63..262
                     /region_name="Nnt1"
                     /note="Protein N-terminal and lysine N-methylase,
                     NNT1/EFM7 family [Posttranslational modification, protein
                     turnover, chaperones]; COG3897"
                     /db_xref="CDD:443104"
     CDS             1..269
                     /gene="ETFBKMT"
                     /coded_by="XM_041467193.1:204..1013"
                     /db_xref="GeneID:121353391"
ORIGIN      
        1 malcgwkwll llgrqntlar vwrsrrgslc wqrcchwsag ksldpevraf leentevtns
       61 ghltpeirlr lltprcrfwr ekpdlwpygd pfwaiywpgg qalsryildn prvvkgrsvl
      121 dlgsgcgata iaavmsgasq vlandidpia gmamilncel nhlnpfpiti kniinseagn
      181 wdlivlgdmf ydeqladglh hwlqkcirih qtevligdpg rhqflshsir sqlhkvieys
      241 lpestrqeny gltssivwsy qpsnsldds
//
LOCUS       XP_041323129             269 aa            linear   VRT 06-MAY-2021
DEFINITION  electron transfer flavoprotein beta subunit lysine
            methyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041323129
VERSION     XP_041323129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467195.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="electron transfer flavoprotein beta subunit
                     lysine methyltransferase"
                     /calculated_mol_wt=30435
     Region          63..262
                     /region_name="Nnt1"
                     /note="Protein N-terminal and lysine N-methylase,
                     NNT1/EFM7 family [Posttranslational modification, protein
                     turnover, chaperones]; COG3897"
                     /db_xref="CDD:443104"
     CDS             1..269
                     /gene="ETFBKMT"
                     /coded_by="XM_041467195.1:259..1068"
                     /db_xref="GeneID:121353391"
ORIGIN      
        1 malcgwkwll llgrqntlar vwrsrrgslc wqrcchwsag ksldpevraf leentevtns
       61 ghltpeirlr lltprcrfwr ekpdlwpygd pfwaiywpgg qalsryildn prvvkgrsvl
      121 dlgsgcgata iaavmsgasq vlandidpia gmamilncel nhlnpfpiti kniinseagn
      181 wdlivlgdmf ydeqladglh hwlqkcirih qtevligdpg rhqflshsir sqlhkvieys
      241 lpestrqeny gltssivwsy qpsnsldds
//
LOCUS       XP_041323130             269 aa            linear   VRT 06-MAY-2021
DEFINITION  electron transfer flavoprotein beta subunit lysine
            methyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041323130
VERSION     XP_041323130.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467196.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="electron transfer flavoprotein beta subunit
                     lysine methyltransferase"
                     /calculated_mol_wt=30435
     Region          63..262
                     /region_name="Nnt1"
                     /note="Protein N-terminal and lysine N-methylase,
                     NNT1/EFM7 family [Posttranslational modification, protein
                     turnover, chaperones]; COG3897"
                     /db_xref="CDD:443104"
     CDS             1..269
                     /gene="ETFBKMT"
                     /coded_by="XM_041467196.1:150..959"
                     /db_xref="GeneID:121353391"
ORIGIN      
        1 malcgwkwll llgrqntlar vwrsrrgslc wqrcchwsag ksldpevraf leentevtns
       61 ghltpeirlr lltprcrfwr ekpdlwpygd pfwaiywpgg qalsryildn prvvkgrsvl
      121 dlgsgcgata iaavmsgasq vlandidpia gmamilncel nhlnpfpiti kniinseagn
      181 wdlivlgdmf ydeqladglh hwlqkcirih qtevligdpg rhqflshsir sqlhkvieys
      241 lpestrqeny gltssivwsy qpsnsldds
//
LOCUS       XP_041323131             890 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 36 [Pyrgilauda ruficollis].
ACCESSION   XP_041323131
VERSION     XP_041323131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467197.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519430.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..890
                     /product="WD repeat-containing protein 36"
                     /calculated_mol_wt=98470
     Region          <42..259
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          67..99
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          104..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..183
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          159..633
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          189..225
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          231..267
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          275..314
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..344
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          439..471
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          483..519
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          528..560
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          566..599
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          685..886
                     /region_name="Utp21"
                     /note="Utp21 specific WD40 associated putative domain;
                     pfam04192"
                     /db_xref="CDD:461219"
     CDS             1..890
                     /gene="WDR36"
                     /coded_by="XM_041467197.1:37..2709"
                     /db_xref="GeneID:121353392"
ORIGIN      
        1 maregvglfa afrvlgrfsg hvphvlryhg rhrefyvaaa vgrsvhtynv kklgivavsn
       61 tlpqdiacla adrmlifasy dnilhafarn kevvhtyegh karihllqpf gdhvisldvd
      121 nvlivwniqs eeeylqidfd katfavsall hpstylnkil lgseqgtlql wnirsnklly
      181 sfpgwglavt tleqapavdv vavglvsghi vvhnikfdet lmkfqqdwgp itaisfrtdg
      241 hpvmaagspv ghialwdlee kklmcqmqda hsttiagmsf vpgepllitn gadnalrvwi
      301 fdgpggtgri lrsrmghsap ptkiryhgqn geqilsagqd gtlqsfstvh ekfnkslgrg
      361 sinkkkskkk glkldtmalp pitafaseva hqsdwdgiva chqgyitctt wnyqktsmga
      421 hklrpeefsk hkpidiyata vditscgnfa vigmstgrvd vynmqsgihr ghygketahe
      481 gairgvavdg lnqliitags eglikfwkfk mkdlvystel ssspsgillh rdsgilgiaf
      541 ddftisvldi etrkivrtfs ghhgrindmt fspdgrwlit ssmdcsiktw dlpsgclidc
      601 flvdsaavsl tmsptgdfla sahvddlgiy lwsnrslysl vslrplpady epslvtlpst
      661 cpmqdvdvsg deepcdemie yvspeqlgeq lvtlsllpes rwknllnldi ikkknkprep
      721 pkvpksapff iptlpglipr yilpeeendt qskvvnlgil aqksdfyihl eealstneyk
      781 apldllkslg psnievelrg lapegggsme vmlsflrmvg vmlnkkynfe laqaylalfl
      841 klhlkilsse pklleelskl svqledtwih lralfhqslc vltymksall
//
LOCUS       XP_041323132             397 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase type IV [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323132
VERSION     XP_041323132.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467198.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519430.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..397
                     /product="calcium/calmodulin-dependent protein kinase type
                     IV"
                     /calculated_mol_wt=43568
     Region          46..339
                     /region_name="STKc_CaMKIV"
                     /note="Catalytic domain of the Serine/Threonine kinase,
                     Calcium/calmodulin-dependent protein kinase Type IV;
                     cd14085"
                     /db_xref="CDD:270987"
     Site            order(56..60,64,77,79,106,122..125,129,131,167..168,170,
                     172..173,175,188..189,192,206..210,212)
                     /site_type="active"
                     /db_xref="CDD:270987"
     Site            order(56..59,64,77,79,106,122..125,129,172..173,175,
                     188..189)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270987"
     Site            order(60,129,131,167..168,170,172,192,206..210,212)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270987"
     Site            188..210
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270987"
     CDS             1..397
                     /gene="CAMK4"
                     /coded_by="XM_041467198.1:1..1194"
                     /db_xref="GeneID:121353393"
ORIGIN      
        1 mlkvtmpsss ssssssssss sgssaasrpg savpdywidg snkdtlahyf eleselgrga
       61 tsivyrcrqk gtqkpyavkm lkktidkkiv rteigvllrl shpniiklke ifetpteisl
      121 vlelvtggel fdrivekgyy serdaadavk qileavsylh angivhrdlk penllyatpa
      181 pdaplkiadf glskivedhv tmktvcgtpg ycapeilrgc aygpevdmws lgiityillc
      241 gfepfyderg dqymfkrils ceydfvspww ddvslnakdl vkklivldpk krlttlqalq
      301 hpwvtgkain fahmdnaqkk lqefnarrkl kaavkavvas trlgsasshs aheghkpghs
      361 paptqdsqpt dkttqdsqpv dkptqeaaaa vapeemp
//
LOCUS       XP_041323133             216 aa            linear   VRT 06-MAY-2021
DEFINITION  stAR-related lipid transfer protein 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323133
VERSION     XP_041323133.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467199.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519430.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="stAR-related lipid transfer protein 4 isoform
                     X1"
                     /calculated_mol_wt=24186
     Region          14..215
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(62,64,66,75..77,79..80,95,106,108,110,112,127,129,
                     131,140,142,161..162,164,166,178,180,182,184,195..199,
                     201..202,205..207,210)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..216
                     /gene="STARD4"
                     /coded_by="XM_041467199.1:184..834"
                     /db_xref="GeneID:121353394"
ORIGIN      
        1 mhlraggkqm dplpnpapla sklrntlvry hsigdgewrv akktkdatvw rkpseefsgy
       61 lykaqgvved vtnrivdhir pgpyrldwds lmtsmdimet feanccvmry ttagqlwnii
      121 aprefvdfsy ttsyedgllt cgisldygea rpnfvrgfnh pcgwfciplk dapgqslltg
      181 yiqtelrgml pqsavdtams stlanfysdl kkalka
//
LOCUS       XP_041323134             207 aa            linear   VRT 06-MAY-2021
DEFINITION  stAR-related lipid transfer protein 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323134
VERSION     XP_041323134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467200.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519430.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="stAR-related lipid transfer protein 4 isoform
                     X2"
                     /calculated_mol_wt=23207
     Region          5..206
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(53,55,57,66..68,70..71,86,97,99,101,103,118,120,122,
                     131,133,152..153,155,157,169,171,173,175,186..190,
                     192..193,196..198,201)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..207
                     /gene="STARD4"
                     /coded_by="XM_041467200.1:219..842"
                     /db_xref="GeneID:121353394"
ORIGIN      
        1 mdplpnpapl asklrntlvr yhsigdgewr vakktkdatv wrkpseefsg ylykaqgvve
       61 dvtnrivdhi rpgpyrldwd slmtsmdime tfeanccvmr yttagqlwni iaprefvdfs
      121 yttsyedgll tcgisldyge arpnfvrgfn hpcgwfcipl kdapgqsllt gyiqtelrgm
      181 lpqsavdtam sstlanfysd lkkalka
//
LOCUS       XP_041323135             192 aa            linear   VRT 06-MAY-2021
DEFINITION  stAR-related lipid transfer protein 4 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323135
VERSION     XP_041323135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467201.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519430.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="stAR-related lipid transfer protein 4 isoform
                     X3"
                     /calculated_mol_wt=21467
     Region          14..187
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     CDS             1..192
                     /gene="STARD4"
                     /coded_by="XM_041467201.1:184..762"
                     /db_xref="GeneID:121353394"
ORIGIN      
        1 mhlraggkqm dplpnpapla sklrntlvry hsigdgewrv akktkdatvw rkpseefsgy
       61 lykaqgvved vtnrivdhir pgpyrldwds lmtsmdimet feanccvmry ttagqlwnii
      121 aprefvdfsy ttsyedgllt cgisldygea rpnfvrgfnh pcgwfciplk dapgqslltg
      181 nlsgalrrsv ta
//
LOCUS       XP_041323136             180 aa            linear   VRT 06-MAY-2021
DEFINITION  stAR-related lipid transfer protein 4 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323136
VERSION     XP_041323136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519430.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..180
                     /product="stAR-related lipid transfer protein 4 isoform
                     X4"
                     /calculated_mol_wt=20856
     Region          14..>141
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     CDS             1..180
                     /gene="STARD4"
                     /coded_by="XM_041467202.1:184..726"
                     /db_xref="GeneID:121353394"
ORIGIN      
        1 mhlraggkqm dplpnpapla sklrntlvry hsigdgewrv akktkdatvw rkpseefsgy
       61 lykaqgvved vtnrivdhir pgpyrldwds lmtsmdimet feanccvmry ttagqlwnii
      121 aprefvdfsy ttsyedgllt cerkrccwqr sflvlrsrtw qiylwkiins trtasfnqss
//
LOCUS       XP_041323138             408 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 25 member 46 [Pyrgilauda ruficollis].
ACCESSION   XP_041323138
VERSION     XP_041323138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467204.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519430.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="solute carrier family 25 member 46"
                     /calculated_mol_wt=44494
     Region          307..408
                     /region_name="Mito_carr"
                     /note="Mitochondrial carrier protein; pfam00153"
                     /db_xref="CDD:395101"
     CDS             1..408
                     /gene="SLC25A46"
                     /coded_by="XM_041467204.1:138..1364"
                     /db_xref="GeneID:121353396"
ORIGIN      
        1 mhprrpegfd glgyrgigrd elgpgsrpfs sgselgswvt sppdipgsrn lhwgektppy
       61 gagtplsgag sneeanlgtg gpgaeqlnrf agfgiglasl ftenvlahpc ivlrrqcqvn
      121 yharnyhltp ftivnimyci nktqgpralw kgmgstfivq gitlgtegii seftplprel
      181 shkwnlkqig ghlllkglth viampfysas lietvqseii rdnpgildcv kegigrvvgl
      241 gvphskrllp lmvltfptal hgvlhyiiss ivqklvlfvl krdnshnlpt esstsvqsml
      301 dayfpeliag faaslcadvm lypletvlhr lhiqgtrtii dntdlgyevl pintqyegvk
      361 dcintikree gmqgfykgfg avivqytlhv avlqltkiiy stllqnvs
//
LOCUS       XP_041323139             112 aa            linear   VRT 06-MAY-2021
DEFINITION  general transcription factor IIF subunit 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323139
VERSION     XP_041323139.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467205.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519486.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>112
                     /product="general transcription factor IIF subunit 1-like"
     Region          <7..>73
                     /region_name="TFIIF_alpha"
                     /note="Transcription initiation factor IIF, alpha subunit
                     (TFIIF-alpha); pfam05793"
                     /db_xref="CDD:310411"
     CDS             1..112
                     /gene="LOC121353397"
                     /coded_by="XM_041467205.1:1..>338"
                     /db_xref="GeneID:121353397"
ORIGIN      
        1 msgcppddfg nekspsgeka arpkaagagp ggsrrrrrrr rrkgakgsed ealedsddgd
       61 fegqevdyms dgsrhrrser eqrgerggeg ggegggrggq shahppgeee ee
//
LOCUS       XP_041323140              82 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein engrailed-1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323140
VERSION     XP_041323140.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467206.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519514.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>82
                     /product="homeobox protein engrailed-1-like"
     CDS             1..82
                     /gene="LOC121353398"
                     /coded_by="XM_041467206.1:<1..>246"
                     /db_xref="GeneID:121353398"
ORIGIN      
        1 pppppphrtt nffidnilrp dfgckkeppa pagggggggg srerdgdrgq ssgrenvnpl
       61 larppnppal lcpdsncrpd gs
//
LOCUS       XP_041323141              86 aa            linear   VRT 06-MAY-2021
DEFINITION  multiple epidermal growth factor-like domains protein 8, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323141
VERSION     XP_041323141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519530.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>86
                     /product="multiple epidermal growth factor-like domains
                     protein 8"
     CDS             1..86
                     /gene="LOC121353399"
                     /coded_by="XM_041467207.1:<1..>260"
                     /codon_start=3
                     /db_xref="GeneID:121353399"
ORIGIN      
        1 gnvhthyhee kcyeeglhfy hlrchrwspg hpletpnepg spgggryshv sgvlagqvll
       61 vaggfsgtpr gdlraykvps fvlqrs
//
LOCUS       XP_041323142              53 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 354B-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323142
VERSION     XP_041323142.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467208.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519535.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..53
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>53
                     /product="zinc finger protein 354B-like"
     Region          10..>49
                     /region_name="KRAB"
                     /note="krueppel associated box; smart00349"
                     /db_xref="CDD:214630"
     CDS             1..53
                     /gene="LOC121353400"
                     /coded_by="XM_041467208.1:<1..>161"
                     /db_xref="GeneID:121353400"
ORIGIN      
        1 wndlslqvsl tfedvavlft wdewrklaps qrnlyrdvml enyrnlvslc kng
//
LOCUS       XP_041323143            2264 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323143
VERSION     XP_041323143.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467209.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2264
                     /product="serine/threonine-protein kinase WNK2 isoform X1"
                     /calculated_mol_wt=239819
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1063
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1160..1199
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1260..1681
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1261..1453
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2264
                     /gene="WNK2"
                     /coded_by="XM_041467209.1:398..7192"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 pmpghtqfal eagaqvpvlp vqpsmvmspp lqlqpelvpp cvapegvpqv hgslataapp
     1021 apiepglplp psallqlqpd lsqplgqqlp apcsavaagt etsqeeqaiq dklqalsqsc
     1081 esymspdvas gkemsdsleg atgsgkqegk sskkhkkstr arsrqekssr pkltilnvcn
     1141 tgdkmvecql ethnhkmvtf kfdldgdape eiatymvene filqseketf ieqmkdiidk
     1201 aedmlsedte gerssdqgis pqqdadrlei seekrqsqmk tpvyqqnvlh tgkrwfiicp
     1261 vvenpttdap efsppvppsa qqtegpdpeq addqpvssav teapglgagq qlplhtgasd
     1321 splgatpsla papasiasqp efpapappas apsiaepaaa sggqpefpra vgleeppeap
     1381 alhlqpqade pacvpdveia ccsvgppaav paapgplpal adaavlerqp apqgphlpeg
     1441 gqpfppaagp dalglsgsql qsptqvplaa sqqppvaqgg agmagagvsl lqqqnppgta
     1501 esdsegpprv dfvdntiksl deklrnllyq eyvptssasa gtpdtsvppe qgdseltlsp
     1561 fpeeqapapa ldgrepgipd tgqevkaaaa llvplvpseg lpcppllnkl evtgvsahps
     1621 eargpvtsia sapaapakgl lqvappssgt apqmetfqrs eeakstaspa htgsvmrrat
     1681 adgamsnfhr dgspgsgscg kqaealesgt paktigrfsv istqdeltla aphclrfsap
     1741 pdvyldelps spdmkaavrr vqtassvdvl cdqassdsad epfprqpaaa aaaqlsppss
     1801 statdlikka aaflqrsakg gspgpespng qgakiptini tsfhsqssym ssdndsefed
     1861 admkkelqnl rekhmkeiae lqtqqkneie alyirlgkpl ppnlgflhsa ppssrrrrts
     1921 knklkagkll nplvqqlrsg tsstsnlsds kdsphkessn sqpgfpeaaa vpagaapafg
     1981 kavqtqqpcs vkaslssdic sglgpdaada ntgsgqgwtv fhqtservty kssskprtrf
     2041 lsgpvslsiw stlkrlclgk dhssrsstns lvtcpeplpq stlqvqanns nnkkgtftdd
     2101 lhklvdqwts ktvgaaqtkp slnqlkqnqk rqdmepkanp mqtqnetcgv ssvrtglgsk
     2161 cpvpvacpmp sglapgaaps lpvpvpgpal agavtpyvmp lcqygavfps pvygvpwpgp
     2221 vaqpglvrgp givrfsplgr sclrmypvpl qrparpagpr lrmt
//
LOCUS       XP_041323144            2263 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323144
VERSION     XP_041323144.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467210.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2263
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2263
                     /product="serine/threonine-protein kinase WNK2 isoform X2"
                     /calculated_mol_wt=239691
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1062
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1159..1198
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1259..1680
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1260..1452
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2263
                     /gene="WNK2"
                     /coded_by="XM_041467210.1:398..7189"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqpisqa aslqqvlgsq pvcplppaph llppfpaqgs qvpasstplk
      781 plqiptvpql ppvapsqipq fpvipaitpl agldslppnl sdipaanvpp ipapsqyfap
      841 avilpslpmn ptlpmapnsp alpmqavnlp httvaslvlp cqpivpnmpa atipllavap
      901 pgvpplppqp vfqpafqpll pgdapsphht qssqpvsqaq ppppalqpsv ihppepahqp
      961 mpghtqfale agaqvpvlpv qpsmvmsppl qlqpelvppc vapegvpqvh gslataappa
     1021 piepglplpp sallqlqpdl sqplgqqlpa pcsavaagte tsqeeqaiqd klqalsqsce
     1081 symspdvasg kemsdslega tgsgkqegks skkhkkstra rsrqekssrp kltilnvcnt
     1141 gdkmvecqle thnhkmvtfk fdldgdapee iatymvenef ilqseketfi eqmkdiidka
     1201 edmlsedteg erssdqgisp qqdadrleis eekrqsqmkt pvyqqnvlht gkrwfiicpv
     1261 venpttdape fsppvppsaq qtegpdpeqa ddqpvssavt eapglgagqq lplhtgasds
     1321 plgatpslap apasiasqpe fpapappasa psiaepaaas ggqpefprav gleeppeapa
     1381 lhlqpqadep acvpdveiac csvgppaavp aapgplpala daavlerqpa pqgphlpegg
     1441 qpfppaagpd alglsgsqlq sptqvplaas qqppvaqgga gmagagvsll qqqnppgtae
     1501 sdsegpprvd fvdntiksld eklrnllyqe yvptssasag tpdtsvppeq gdseltlspf
     1561 peeqapapal dgrepgipdt gqevkaaaal lvplvpsegl pcppllnkle vtgvsahpse
     1621 argpvtsias apaapakgll qvappssgta pqmetfqrse eakstaspah tgsvmrrata
     1681 dgamsnfhrd gspgsgscgk qaealesgtp aktigrfsvi stqdeltlaa phclrfsapp
     1741 dvyldelpss pdmkaavrrv qtassvdvlc dqassdsade pfprqpaaaa aaqlsppsss
     1801 tatdlikkaa aflqrsakgg spgpespngq gakiptinit sfhsqssyms sdndsefeda
     1861 dmkkelqnlr ekhmkeiael qtqqkneiea lyirlgkplp pnlgflhsap pssrrrrtsk
     1921 nklkagklln plvqqlrsgt sstsnlsdsk dsphkessns qpgfpeaaav pagaapafgk
     1981 avqtqqpcsv kaslssdics glgpdaadan tgsgqgwtvf hqtservtyk ssskprtrfl
     2041 sgpvslsiws tlkrlclgkd hssrsstnsl vtcpeplpqs tlqvqannsn nkkgtftddl
     2101 hklvdqwtsk tvgaaqtkps lnqlkqnqkr qdmepkanpm qtqnetcgvs svrtglgskc
     2161 pvpvacpmps glapgaapsl pvpvpgpala gavtpyvmpl cqygavfpsp vygvpwpgpv
     2221 aqpglvrgpg ivrfsplgrs clrmypvplq rparpagprl rmt
//
LOCUS       XP_041323145            2242 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323145
VERSION     XP_041323145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467211.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2242
                     /product="serine/threonine-protein kinase WNK2 isoform X3"
                     /calculated_mol_wt=237682
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1063
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1160..1199
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1261..1453
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2242
                     /gene="WNK2"
                     /coded_by="XM_041467211.1:398..7126"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 pmpghtqfal eagaqvpvlp vqpsmvmspp lqlqpelvpp cvapegvpqv hgslataapp
     1021 apiepglplp psallqlqpd lsqplgqqlp apcsavaagt etsqeeqaiq dklqalsqsc
     1081 esymspdvas gkemsdsleg atgsgkqegk sskkhkkstr arsrqekssr pkltilnvcn
     1141 tgdkmvecql ethnhkmvtf kfdldgdape eiatymvene filqseketf ieqmkdiidk
     1201 aedmlsedte gerssdqgis pqqdadrlei seekrqsqmk tpvyqqnvlh tgkrwfiicp
     1261 vvenpttdap efsppvppsa qqtegpdpeq addqpvssav teapglgagq qlplhtgasd
     1321 splgatpsla papasiasqp efpapappas apsiaepaaa sggqpefpra vgleeppeap
     1381 alhlqpqade pacvpdveia ccsvgppaav paapgplpal adaavlerqp apqgphlpeg
     1441 gqpfppaagp dalglsgsql qsptqvplaa sqqppvaqgg agmagagvsl lqqqnppgta
     1501 esdsegpprv dfvdntiksl deklrnllyq eyvptssasa gtpdtsvppe qgdseltlsp
     1561 fpeeqapapa ldgrepgipd tgqelnklev tgvsahpsea rgpvtsiasa paapakgllq
     1621 vappssgtap qmetfqrsee akstaspaht gsvmrratad gamsnfhrdg spgsgscgkq
     1681 aealesgtpa ktigrfsvis tqdeltlaap hclrfsappd vyldelpssp dmkaavrrvq
     1741 tassvdvlcd qassdsadep fprqpaaaaa aqlsppssst atdlikkaaa flqrsakggs
     1801 pgpespngqg akiptinits fhsqssymss dndsefedad mkkelqnlre khmkeiaelq
     1861 tqqkneieal yirlgkplpp nlgflhsapp ssrrrrtskn klkagkllnp lvqqlrsgts
     1921 stsnlsdskd sphkessnsq pgfpeaaavp agaapafgka vqtqqpcsvk aslssdicsg
     1981 lgpdaadant gsgqgwtvfh qtservtyks sskprtrfls gpvslsiwst lkrlclgkdh
     2041 ssrsstnslv tcpeplpqst lqvqannsnn kkgtftddlh klvdqwtskt vgaaqtkpsl
     2101 nqlkqnqkrq dmepkanpmq tqnetcgvss vrtglgskcp vpvacpmpsg lapgaapslp
     2161 vpvpgpalag avtpyvmplc qygavfpspv ygvpwpgpva qpglvrgpgi vrfsplgrsc
     2221 lrmypvplqr parpagprlr mt
//
LOCUS       XP_041323146            2231 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323146
VERSION     XP_041323146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467212.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2231
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2231
                     /product="serine/threonine-protein kinase WNK2 isoform X4"
                     /calculated_mol_wt=235968
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1063
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1160..1199
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1261..1453
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2231
                     /gene="WNK2"
                     /coded_by="XM_041467212.1:398..7093"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 pmpghtqfal eagaqvpvlp vqpsmvmspp lqlqpelvpp cvapegvpqv hgslataapp
     1021 apiepglplp psallqlqpd lsqplgqqlp apcsavaagt etsqeeqaiq dklqalsqsc
     1081 esymspdvas gkemsdsleg atgsgkqegk sskkhkkstr arsrqekssr pkltilnvcn
     1141 tgdkmvecql ethnhkmvtf kfdldgdape eiatymvene filqseketf ieqmkdiidk
     1201 aedmlsedte gerssdqgis pqqdadrlei seekrqsqmk tpvyqqnvlh tgkrwfiicp
     1261 vvenpttdap efsppvppsa qqtegpdpeq addqpvssav teapglgagq qlplhtgasd
     1321 splgatpsla papasiasqp efpapappas apsiaepaaa sggqpefpra vgleeppeap
     1381 alhlqpqade pacvpdveia ccsvgppaav paapgplpal adaavlerqp apqgphlpeg
     1441 gqpfppaagp dalglsgsql qsptqvplaa sqqppvaqgg agmagagvsl lqqqnppgta
     1501 esdsegpprv dfvdntiksl deklrnllyq eyvptssasa gtpdtsvppe qgdseltlsp
     1561 fpeeqapapa ldgrepgipd tgqevkaaaa llvplvpseg lpcppllnkl evtgvsahps
     1621 eargpvtsia sapaapakgl lqvappssgt apqmetfqrs eeakstaspa htgsvmrrat
     1681 adgamsnfhr dgspgsgscg kqaealesgt paktigrfsv istqdeltla aphclrfsap
     1741 pdvyldelps spdmkaavrr vqtassvdvl cdqassdsad epfprqpaaa aaaqlsppss
     1801 statdlikka aaflqrsakg gspgpespng qgakiptini tsfhsqssym ssdndsefed
     1861 admkkelqnl rekhmkeiae lqtqqkneie alyirlgkpl ppnlgflhsa ppssrrrrts
     1921 knklkagkll nplvqqlrsg tsstsnlsds kdsphkessn sqpgfpeaaa vpagaapafg
     1981 kavqtqqpcs vkaslssdic sglgpdaada ntgsgqgstl krlclgkdhs srsstnslvt
     2041 cpeplpqstl qvqannsnnk kgtftddlhk lvdqwtsktv gaaqtkpsln qlkqnqkrqd
     2101 mepkanpmqt qnetcgvssv rtglgskcpv pvacpmpsgl apgaapslpv pvpgpalaga
     2161 vtpyvmplcq ygavfpspvy gvpwpgpvaq pglvrgpgiv rfsplgrscl rmypvplqrp
     2221 arpagprlrm t
//
LOCUS       XP_041323148            2216 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323148
VERSION     XP_041323148.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467214.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2216
                     /product="serine/threonine-protein kinase WNK2 isoform X5"
                     /calculated_mol_wt=234285
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1063
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1160..1199
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1261..1453
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2216
                     /gene="WNK2"
                     /coded_by="XM_041467214.1:398..7048"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 pmpghtqfal eagaqvpvlp vqpsmvmspp lqlqpelvpp cvapegvpqv hgslataapp
     1021 apiepglplp psallqlqpd lsqplgqqlp apcsavaagt etsqeeqaiq dklqalsqsc
     1081 esymspdvas gkemsdsleg atgsgkqegk sskkhkkstr arsrqekssr pkltilnvcn
     1141 tgdkmvecql ethnhkmvtf kfdldgdape eiatymvene filqseketf ieqmkdiidk
     1201 aedmlsedte gerssdqgis pqqdadrlei seekrqsqmk tpvyqqnvlh tgkrwfiicp
     1261 vvenpttdap efsppvppsa qqtegpdpeq addqpvssav teapglgagq qlplhtgasd
     1321 splgatpsla papasiasqp efpapappas apsiaepaaa sggqpefpra vgleeppeap
     1381 alhlqpqade pacvpdveia ccsvgppaav paapgplpal adaavlerqp apqgphlpeg
     1441 gqpfppaagp dalglsgsql qsptqvplaa sqqppvaqgg agmagagvsl lqqqnppgta
     1501 esdsegpprv dfvdntiksl deklrnllyq eyvptssasa gtpdtsvppe qgdseltlsp
     1561 fpeeqapapa ldgrepgipd tgqevkaaaa llvplvpseg lpcppllnkl evtgvsahps
     1621 eargpvtsia sapaapakgl lqvappssgt apqmetfqrs eeakstaspa htgsvmrrat
     1681 adgamsnfhr dgspgsgscg kqaealesgt paktigrfsv istqdeltla aphclrfsap
     1741 pdvyldelps spdmkaavrr vqtassvdvl cdqassdsad epfprqpaaa aaaqlsppss
     1801 statdlikka aaflqrsakg gspgpespng qgakiptini tsfhsqssym ssdndsefed
     1861 admkkelqnl rekhmkeiae lqtqqkneie alyirlgkpl ppnlgflhsa ppssrrrrts
     1921 knklkagkll nplvqqlrsg tsstsnlsds kdsphkessn sqpgfpeaaa vpagaapafg
     1981 kavqtqqpcs vkaslssdic sglgpdaada ntgsgqgsst nslvtcpepl pqstlqvqan
     2041 nsnnkkgtft ddlhklvdqw tsktvgaaqt kpslnqlkqn qkrqdmepka npmqtqnetc
     2101 gvssvrtglg skcpvpvacp mpsglapgaa pslpvpvpgp alagavtpyv mplcqygavf
     2161 pspvygvpwp gpvaqpglvr gpgivrfspl grsclrmypv plqrparpag prlrmt
//
LOCUS       XP_041323149            2184 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323149
VERSION     XP_041323149.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467215.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2184
                     /product="serine/threonine-protein kinase WNK2 isoform X6"
                     /calculated_mol_wt=231983
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1063
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1160..1199
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1260..1681
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1261..1453
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2184
                     /gene="WNK2"
                     /coded_by="XM_041467215.1:398..6952"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 pmpghtqfal eagaqvpvlp vqpsmvmspp lqlqpelvpp cvapegvpqv hgslataapp
     1021 apiepglplp psallqlqpd lsqplgqqlp apcsavaagt etsqeeqaiq dklqalsqsc
     1081 esymspdvas gkemsdsleg atgsgkqegk sskkhkkstr arsrqekssr pkltilnvcn
     1141 tgdkmvecql ethnhkmvtf kfdldgdape eiatymvene filqseketf ieqmkdiidk
     1201 aedmlsedte gerssdqgis pqqdadrlei seekrqsqmk tpvyqqnvlh tgkrwfiicp
     1261 vvenpttdap efsppvppsa qqtegpdpeq addqpvssav teapglgagq qlplhtgasd
     1321 splgatpsla papasiasqp efpapappas apsiaepaaa sggqpefpra vgleeppeap
     1381 alhlqpqade pacvpdveia ccsvgppaav paapgplpal adaavlerqp apqgphlpeg
     1441 gqpfppaagp dalglsgsql qsptqvplaa sqqppvaqgg agmagagvsl lqqqnppgta
     1501 esdsegpprv dfvdntiksl deklrnllyq eyvptssasa gtpdtsvppe qgdseltlsp
     1561 fpeeqapapa ldgrepgipd tgqevkaaaa llvplvpseg lpcppllnkl evtgvsahps
     1621 eargpvtsia sapaapakgl lqvappssgt apqmetfqrs eeakstaspa htgsvmrrat
     1681 adgamsnfhr dgspgsgscg kqaealesgt paktigrfsv istqdeltla aphclrfsap
     1741 pdvyldelps spdmkaavrr vqtassvdvl cdqassdsad epfprqpaaa aaaqlsppss
     1801 statdlikka aaflqrsakg gspgpespng qgakiptini tsfhsqssym ssdndsefed
     1861 admkkelqnl rekhmkeiae lqtqqkneie alyirlgkpl ppnlgflhsa ppssrrrrts
     1921 knklkagkll nplvqqlrsg tsstsnlsds kdsphkessn sqpgfpeaaa vpagaapafg
     1981 kavqtqqpcs vkaslssdic sglgpdaada ntgsgqgwtv fhqtservty kssskprtrf
     2041 lsgpvslsiw stlkrlclgk dhssrsstns lvtcpeplpq stlqvqanns nnkkgtftdd
     2101 lhklvdqwts ktvgaaqtkp slnqlkqnqk rqdmepkanp mqtqnetcgi lkmrpsvtdt
     2161 wppqlrcqaq gpaaakeeee edgk
//
LOCUS       XP_041323150            2159 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323150
VERSION     XP_041323150.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467216.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2159
                     /product="serine/threonine-protein kinase WNK2 isoform X7"
                     /calculated_mol_wt=229210
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <655..928
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1055..1094
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1155..1576
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1156..1348
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2159
                     /gene="WNK2"
                     /coded_by="XM_041467216.1:398..6877"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 eqaiqdklqa lsqscesyms pdvasgkems dslegatgsg kqegksskkh kkstrarsrq
     1021 ekssrpklti lnvcntgdkm vecqlethnh kmvtfkfdld gdapeeiaty mvenefilqs
     1081 eketfieqmk diidkaedml sedtegerss dqgispqqda drleiseekr qsqmktpvyq
     1141 qnvlhtgkrw fiicpvvenp ttdapefspp vppsaqqteg pdpeqaddqp vssavteapg
     1201 lgagqqlplh tgasdsplga tpslapapas iasqpefpap appasapsia epaaasggqp
     1261 efpravglee ppeapalhlq pqadepacvp dveiaccsvg ppaavpaapg plpaladaav
     1321 lerqpapqgp hlpeggqpfp paagpdalgl sgsqlqsptq vplaasqqpp vaqggagmag
     1381 agvsllqqqn ppgtaesdse gpprvdfvdn tiksldeklr nllyqeyvpt ssasagtpdt
     1441 svppeqgdse ltlspfpeeq apapaldgre pgipdtgqev kaaaallvpl vpseglpcpp
     1501 llnklevtgv sahpseargp vtsiasapaa pakgllqvap pssgtapqme tfqrseeaks
     1561 taspahtgsv mrratadgam snfhrdgspg sgscgkqaea lesgtpakti grfsvistqd
     1621 eltlaaphcl rfsappdvyl delpsspdmk aavrrvqtas svdvlcdqas sdsadepfpr
     1681 qpaaaaaaql sppssstatd likkaaaflq rsakggspgp espngqgaki ptinitsfhs
     1741 qssymssdnd sefedadmkk elqnlrekhm keiaelqtqq kneiealyir lgkplppnlg
     1801 flhsappssr rrrtsknklk agkllnplvq qlrsgtssts nlsdskdsph kessnsqpgf
     1861 peaaavpaga apafgkavqt qqpcsvkasl ssdicsglgp daadantgsg qgwtvfhqts
     1921 ervtyksssk prtrflsgpv slsiwstlkr lclgkdhssr sstnslvtcp eplpqstlqv
     1981 qannsnnkkg tftddlhklv dqwtsktvga aqtkpslnql kqnqkrqdme pkanpmqtqn
     2041 etcgvssvrt glgskcpvpv acpmpsglap gaapslpvpv pgpalagavt pyvmplcqyg
     2101 avfpspvygv pwpgpvaqpg lvrgpgivrf splgrsclrm ypvplqrpar pagprlrmt
//
LOCUS       XP_041323151            2144 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323151
VERSION     XP_041323151.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467217.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2144
                     /product="serine/threonine-protein kinase WNK2 isoform X8"
                     /calculated_mol_wt=227401
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1063
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1160..1199
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1261..1453
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2144
                     /gene="WNK2"
                     /coded_by="XM_041467217.1:398..6832"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 pmpghtqfal eagaqvpvlp vqpsmvmspp lqlqpelvpp cvapegvpqv hgslataapp
     1021 apiepglplp psallqlqpd lsqplgqqlp apcsavaagt etsqeeqaiq dklqalsqsc
     1081 esymspdvas gkemsdsleg atgsgkqegk sskkhkkstr arsrqekssr pkltilnvcn
     1141 tgdkmvecql ethnhkmvtf kfdldgdape eiatymvene filqseketf ieqmkdiidk
     1201 aedmlsedte gerssdqgis pqqdadrlei seekrqsqmk tpvyqqnvlh tgkrwfiicp
     1261 vvenpttdap efsppvppsa qqtegpdpeq addqpvssav teapglgagq qlplhtgasd
     1321 splgatpsla papasiasqp efpapappas apsiaepaaa sggqpefpra vgleeppeap
     1381 alhlqpqade pacvpdveia ccsvgppaav paapgplpal adaavlerqp apqgphlpeg
     1441 gqpfppaagp dalglsgsql qsptqvplaa sqqppvaqgg agmagagvsl lqqqnppgta
     1501 esdsegpprv dfvdntiksl deklrnllyq eyvptssasa gtpdtsvppe qgdseltlsp
     1561 fpeeqapapa ldgrepgipd tgqevkaaaa llvplvpseg lpcppllnkl evtgvsahps
     1621 eargpvtsia sapaapakgl lqvappssgt apqmetfqrs eeakstaspa htgsvmrrat
     1681 adgamsnfhr dgspgsgscg kqaealesgt paktigrfsv istqdeltla aphclrfsap
     1741 pdvyldelps spdmkaavrr vqtassvdvl cdqassdsad epfprqpaaa aaaqlsppss
     1801 statdlikka aaflqrsakg gspgpespng qgakiptini tsfhsqssym ssdndsefed
     1861 admkkelqnl rekhmkeiae lqtqqkneie alyirlgkpl ppnlgflhsa ppssrrrrts
     1921 knklkagkll nplvqqlrsg tsstrsstns lvtcpeplpq stlqvqanns nnkkgtftdd
     1981 lhklvdqwts ktvgaaqtkp slnqlkqnqk rqdmepkanp mqtqnetcgv ssvrtglgsk
     2041 cpvpvacpmp sglapgaaps lpvpvpgpal agavtpyvmp lcqygavfps pvygvpwpgp
     2101 vaqpglvrgp givrfsplgr sclrmypvpl qrparpagpr lrmt
//
LOCUS       XP_041323152            2132 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase WNK2 isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323152
VERSION     XP_041323152.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467218.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2132
                     /product="serine/threonine-protein kinase WNK2 isoform X9"
                     /calculated_mol_wt=226233
     Region          204..469
                     /region_name="STKc_WNK2_like"
                     /note="Catalytic domain of With No Lysine (WNK) 2-like
                     Serine/Threonine kinases; cd14032"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,295,334,336,
                     338..339,341,353,356,370..373)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270934"
     Site            order(212..216,220,233,235,266,286..289,293,334,336,
                     338..339,341,353)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:270934"
     Site            order(216,293,295,334,336,338,356,370..373)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:270934"
     Site            352..373
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270934"
     Region          485..548
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <651..1063
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1160..1199
                     /region_name="OSR1_C"
                     /note="Oxidative-stress-responsive kinase 1 C-terminal
                     domain; pfam12202"
                     /db_xref="CDD:463491"
     Region          <1260..1681
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1261..1453
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..2132
                     /gene="WNK2"
                     /coded_by="XM_041467218.1:398..6796"
                     /db_xref="GeneID:121353402"
ORIGIN      
        1 mesggdaraa llrggrgggr ggvpaaaepg appaaetgvn mdgpggggsg aaadtdaaaa
       61 paapgaptpp prgpgsrdpk lvhqrflrrs vvdsdqeepa fdlpeaehqr riillpktrr
      121 iiaerakagq gaaeaagrea ecsgepraap aagstagaee pkepgkdaer retqdaakdq
      181 gkakkeepee eadmkavats pdgrflkfdi elgrgsfktv ykgldtetwv evawcelqdr
      241 kltkverqrf keeaemlkgl qhpnivrfyd fwescakgkr civlvtelmt sgtlktylkr
      301 fkvmkpkvlr swcrqilkgl lflhtrtppi ihrdlkcdni fitgptgsvk igdlglatlk
      361 rasfaksvig tpefmapemy eehydesvdv yafgmcmlem atseypysec qnaaqiyrkv
      421 tcgikpasfe kvtdpeikei igecicknke eryeikdlls haffaedtgv rvelaeedhg
      481 rkssialrlw vedpkklkgk pkdngaieft fdleketpdd vaqemidsgf fhendlkiva
      541 ksirdrvali lwrreriwpr mqleerrdse cldklkapqa qqvqvtylsh tghhilsepe
      601 epeadqhpfq qnlptsvtsv asdstfdsgq gstvysdsqs sqqsviyssl pdtvppaiqr
      661 vyspplsegq pvphslpqlg hyqqpsapvl pavpatpavv pqhyqepamp fpvvpstvas
      721 lplgqpppvl agqqqqpisq aaslqqvlgs qpvcplppap hllppfpaqg sqvpasstpl
      781 kplqiptvpq lppvapsqip qfpvipaitp lagldslppn lsdipaanvp pipapsqyfa
      841 pavilpslpm nptlpmapns palpmqavnl phttvaslvl pcqpivpnmp aatipllava
      901 ppgvpplppq pvfqpafqpl lpgdapsphh tqssqpvsqa qppppalqps vihppepahq
      961 pmpghtqfal eagaqvpvlp vqpsmvmspp lqlqpelvpp cvapegvpqv hgslataapp
     1021 apiepglplp psallqlqpd lsqplgqqlp apcsavaagt etsqeeqaiq dklqalsqsc
     1081 esymspdvas gkemsdsleg atgsgkqegk sskkhkkstr arsrqekssr pkltilnvcn
     1141 tgdkmvecql ethnhkmvtf kfdldgdape eiatymvene filqseketf ieqmkdiidk
     1201 aedmlsedte gerssdqgis pqqdadrlei seekrqsqmk tpvyqqnvlh tgkrwfiicp
     1261 vvenpttdap efsppvppsa qqtegpdpeq addqpvssav teapglgagq qlplhtgasd
     1321 splgatpsla papasiasqp efpapappas apsiaepaaa sggqpefpra vgleeppeap
     1381 alhlqpqade pacvpdveia ccsvgppaav paapgplpal adaavlerqp apqgphlpeg
     1441 gqpfppaagp dalglsgsql qsptqvplaa sqqppvaqgg agmagagvsl lqqqnppgta
     1501 esdsegpprv dfvdntiksl deklrnllyq eyvptssasa gtpdtsvppe qgdseltlsp
     1561 fpeeqapapa ldgrepgipd tgqevkaaaa llvplvpseg lpcppllnkl evtgvsahps
     1621 eargpvtsia sapaapakgl lqvappssgt apqmetfqrs eeakstaspa htgsvmrrat
     1681 adgamsnfhr dgspgsgscg kqaealesgt paktigrfsv istqdeltla aphclrfsap
     1741 pdvyldelps spdmkaavrr vqtassvdvl cdqassdsad epfprqpaaa aaaqlsppss
     1801 statdlikka aaflqrsakg gspgpespng qgakiptini tsfhsqssym ssdndsefed
     1861 admkkelqnl rekhmkeiae lqtqqkneie alyirlgkpl ppnlgflhsa ppssrrrrts
     1921 knklkagkll nplvqqlrsg tsstsnlsds kdsphkessn sqpgfpeaaa vpagaapafg
     1981 kavqtqqpcs vkaslssdic sglgpdaada ntgsgqgwtv fhqtservty kssskprtrf
     2041 lsgpvslsiw stlkrlclgk dhssrsstns lvtcpeplpq stlqvqanns nnkkgtftdd
     2101 lhklvdqwts ktvgaaqtkp slnqlkqnqk rf
//
LOCUS       XP_041323153            1116 aa            linear   VRT 06-MAY-2021
DEFINITION  constitutive coactivator of PPAR-gamma-like protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323153
VERSION     XP_041323153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1116
                     /product="constitutive coactivator of PPAR-gamma-like
                     protein 1 isoform X1"
                     /calculated_mol_wt=122432
     Region          5..220
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     CDS             1..1116
                     /gene="FAM120A"
                     /coded_by="XM_041467219.1:527..3877"
                     /db_xref="GeneID:121353403"
ORIGIN      
        1 mgvqgfqdyi ekhcpsavvp velqklargs lvgggrqrpp qtplrllida dnclhrlygg
       61 fytdwvsggq wnhmlgylaa lakacfngni elfvffngal ekarlhewvk rqgnerqtaq
      121 qivshvqnkg tpppkvwflp pvcmahcirl alirfhikva qsiedhhqev iafcrekgfh
      181 glvaydsdya lcnipyyfsa halklsrngk slttsqylmh evakqldlnp nrfpifaall
      241 gnhilpdedl asfhwsllgp ehplaslkvr ahqlvlppcd vvikavadyv rniqdttdld
      301 aiakdvfqhs qsrtddkvtr fkravayysa tnkpmpfhpp hylaarpnqf gmpgivppyv
      361 psqmlnipqt slqakpaaqq mssqggaqgq gpypyslsep aitletggks lseqnnysni
      421 phegkhtply ersspinpaq sgspnhvdst yfpasstsss sdndegngga vnhvsgnkig
      481 wekpgtqseg qtrgelgdqt kaegsssass gsqaadvkgn qtsnpqipcl lsmptrnhmd
      541 ittpplppva pevlrvaehr hkkglmypyi fhvltkgeik iavsiedean kdlppaally
      601 rpvrqyvygv lfslaesrkk terlafrknr lppefspvii kewaaykgks pqtpelveal
      661 afrewtcpnl kklwlgkave dknrrmrafl acmrsdtpam lnptnvpthl mvlccvlrym
      721 vqwpgvrilr rqeldaflaq alspklyepd qlqelkienl dprgiqlsal fmsgvdmalf
      781 andacgqpip wehccpwmyf dgklfqtkli kasrekvpli dlcdgqaeqa akvekmrqsi
      841 leglnfsrqn hplpfppppa mpfypasmyp rhfgpvpppq grgrgfagvy gfggpygetv
      901 atgtyrafrv aaaaghsgaf sgndsnrtsk fqggvqpips qggkleiagt vvghwagsrr
      961 grggrgpfpl qvvsvggpar grprgvistp virtfgrggr yygrgyksqg aiqgkppyaa
     1021 saeevakelk skseeskssl vssdgslaen gvvteekpas qmngntgdir asnqsesals
     1081 ndskmcntnp hlnalnadsv chkddaleat vlkkee
//
LOCUS       XP_041323154            1115 aa            linear   VRT 06-MAY-2021
DEFINITION  constitutive coactivator of PPAR-gamma-like protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323154
VERSION     XP_041323154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1115
                     /product="constitutive coactivator of PPAR-gamma-like
                     protein 1 isoform X2"
                     /calculated_mol_wt=122361
     Region          5..220
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     CDS             1..1115
                     /gene="FAM120A"
                     /coded_by="XM_041467220.1:527..3874"
                     /db_xref="GeneID:121353403"
ORIGIN      
        1 mgvqgfqdyi ekhcpsavvp velqklargs lvgggrqrpp qtplrllida dnclhrlygg
       61 fytdwvsggq wnhmlgylaa lakacfngni elfvffngal ekarlhewvk rqgnerqtaq
      121 qivshvqnkg tpppkvwflp pvcmahcirl alirfhikva qsiedhhqev iafcrekgfh
      181 glvaydsdya lcnipyyfsa halklsrngk slttsqylmh evakqldlnp nrfpifaall
      241 gnhilpdedl asfhwsllgp ehplaslkvr ahqlvlppcd vvikavadyv rniqdttdld
      301 aiakdvfqhs qsrtddkvtr fkravayysa tnkpmpfhpp hylarpnqfg mpgivppyvp
      361 sqmlnipqts lqakpaaqqm ssqggaqgqg pypyslsepa itletggksl seqnnysnip
      421 hegkhtplye rsspinpaqs gspnhvdsty fpasstssss dndegnggav nhvsgnkigw
      481 ekpgtqsegq trgelgdqtk aegsssassg sqaadvkgnq tsnpqipcll smptrnhmdi
      541 ttpplppvap evlrvaehrh kkglmypyif hvltkgeiki avsiedeank dlppaallyr
      601 pvrqyvygvl fslaesrkkt erlafrknrl ppefspviik ewaaykgksp qtpelveala
      661 frewtcpnlk klwlgkaved knrrmrafla cmrsdtpaml nptnvpthlm vlccvlrymv
      721 qwpgvrilrr qeldaflaqa lspklyepdq lqelkienld prgiqlsalf msgvdmalfa
      781 ndacgqpipw ehccpwmyfd gklfqtklik asrekvplid lcdgqaeqaa kvekmrqsil
      841 eglnfsrqnh plpfppppam pfypasmypr hfgpvpppqg rgrgfagvyg fggpygetva
      901 tgtyrafrva aaaghsgafs gndsnrtskf qggvqpipsq ggkleiagtv vghwagsrrg
      961 rggrgpfplq vvsvggparg rprgvistpv irtfgrggry ygrgyksqga iqgkppyaas
     1021 aeevakelks kseesksslv ssdgslaeng vvteekpasq mngntgdira snqsesalsn
     1081 dskmcntnph lnalnadsvc hkddaleatv lkkee
//
LOCUS       XP_041323155            1070 aa            linear   VRT 06-MAY-2021
DEFINITION  constitutive coactivator of PPAR-gamma-like protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323155
VERSION     XP_041323155.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467221.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1070
                     /product="constitutive coactivator of PPAR-gamma-like
                     protein 1 isoform X3"
                     /calculated_mol_wt=117804
     Region          5..220
                     /region_name="PIN_SF"
                     /note="PIN (PilT N terminus) domain: Superfamily; cl28905"
                     /db_xref="CDD:475124"
     CDS             1..1070
                     /gene="FAM120A"
                     /coded_by="XM_041467221.1:527..3739"
                     /db_xref="GeneID:121353403"
ORIGIN      
        1 mgvqgfqdyi ekhcpsavvp velqklargs lvgggrqrpp qtplrllida dnclhrlygg
       61 fytdwvsggq wnhmlgylaa lakacfngni elfvffngal ekarlhewvk rqgnerqtaq
      121 qivshvqnkg tpppkvwflp pvcmahcirl alirfhikva qsiedhhqev iafcrekgfh
      181 glvaydsdya lcnipyyfsa halklsrngk slttsqylmh evakqldlnp nrfpifaall
      241 gnhilpdedl asfhwsllgp ehplaslkvr ahqlvlppcd vvikavadyv rniqdttdld
      301 aiakdvfqhs qsrtddkvtr fkravayysa tnkpmpfhpp hylaarpnqf gmpgivppyv
      361 psqmlnipqt slqakpaaqq mssqggaqgq gpypyslsep aitletggks lseqnnysni
      421 phegkhtply ersspinpaq sgspnhvdst yfpasstsss sdndegngga vnhvsgnkig
      481 wekpgtqseg qtrgelgdqt kaegsssass gsqaadvkgn qtsnpqipcl lsmptrnhmd
      541 ittpplppva pevlrvaehr hkkglmypyi fhvltkgeik iavsiedean kdlppaally
      601 rpvrqyvygv lfslaesrkk terlafrknr lppefspvii kewaaykgks pqtpelveal
      661 afrewtcpnl kklwlgkave dknrrmrafl acmrsdtpam lnptnvpthl mvlccvlrym
      721 vqwpgvrilr rqeldaflaq alspklyepd qlqelkienl dprgiqlsal fmsgvdmalf
      781 andacgqpip wehccpwmyf dgklfqtkli kasrekvpli dlcdgqaeqa akvekmrqsi
      841 leglnfsrqn hplpfppppa mpfypasmyp rhfgpvpppq grgrgfagvq pipsqggkle
      901 iagtvvghwa gsrrgrggrg pfplqvvsvg gpargrprgv istpvirtfg rggryygrgy
      961 ksqgaiqgkp pyaasaeeva kelksksees ksslvssdgs laengvvtee kpasqmngnt
     1021 gdirasnqse salsndskmc ntnphlnaln adsvchkdda leatvlkkee
//
LOCUS       XP_041323157             845 aa            linear   VRT 06-MAY-2021
DEFINITION  protein bicaudal D homolog 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323157
VERSION     XP_041323157.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467223.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..845
                     /product="protein bicaudal D homolog 2 isoform X1"
                     /calculated_mol_wt=96854
     Region          83..792
                     /region_name="BicD"
                     /note="Microtubule-associated protein Bicaudal-D;
                     pfam09730"
                     /db_xref="CDD:462863"
     CDS             1..845
                     /gene="BICD2"
                     /coded_by="XM_041467223.1:223..2760"
                     /db_xref="GeneID:121353405"
ORIGIN      
        1 mslaveeeey arlvmesepe wlrseikrlf qelgettrek iqaaeyglav leekqqlkqq
       61 yeeleleyet irnemeqlke afgqahtnhk kvaadgesre etliqesatk eeyymkkvme
      121 lqtelkqirn vlantqsene rlnsvaqelk evnqnveiqr arlrddikey kfrearllqd
      181 yteleeenic lqkqvsvlkq sqvefeglkh eikrleeete flnsqledai rlkeiserql
      241 eealetlkte reqknnlrke lshymninds mynshlnisl dglkfsdeat epnndeimng
      301 feqnclskls ngknststpk knesfppaps lvsdllseln iseiqklkqq lvqmerekvn
      361 llttlqesqk qlentrgals eqhekigrlt enlnamkklq askecqsald nekdrdshed
      421 gdyyevding peileckykv avaeitdlke elknlkakyk eceskyeeek nkyetesqal
      481 tekitsleks trhdreqmar lekelkkvsd vagetqgsls vaqdelvtfs eelanlyhhv
      541 cmcnnetpnr vmldyykegk ggrsspeakg rrspillskg llnielgkte ngsgdsspsp
      601 vsslpspvsd prkepmniyn liaiirdqik hlqaavdrtt elsrqcvatq elgpvvdkdk
      661 ealmeeilkl ksllstkreq iatlrtvlka nkqtaevala nlkskyenek amvtetmmkl
      721 rnelkalked aatfsslram fatrcdeyvt qldemqrqla aaedekktln sllrmaiqqk
      781 laltqrlehl eldheqskrv rtksaskakg snpsvspirs cgdrsegsvl nnqvfcseky
      841 kiccd
//
LOCUS       XP_041323158             815 aa            linear   VRT 06-MAY-2021
DEFINITION  protein bicaudal D homolog 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323158
VERSION     XP_041323158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467224.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="protein bicaudal D homolog 2 isoform X2"
                     /calculated_mol_wt=93547
     Region          83..792
                     /region_name="BicD"
                     /note="Microtubule-associated protein Bicaudal-D;
                     pfam09730"
                     /db_xref="CDD:462863"
     CDS             1..815
                     /gene="BICD2"
                     /coded_by="XM_041467224.1:221..2668"
                     /db_xref="GeneID:121353405"
ORIGIN      
        1 mslaveeeey arlvmesepe wlrseikrlf qelgettrek iqaaeyglav leekqqlkqq
       61 yeeleleyet irnemeqlke afgqahtnhk kvaadgesre etliqesatk eeyymkkvme
      121 lqtelkqirn vlantqsene rlnsvaqelk evnqnveiqr arlrddikey kfrearllqd
      181 yteleeenic lqkqvsvlkq sqvefeglkh eikrleeete flnsqledai rlkeiserql
      241 eealetlkte reqknnlrke lshymninds mynshlnisl dglkfsdeat epnndeimng
      301 feqnclskls ngknststpk knesfppaps lvsdllseln iseiqklkqq lvqmerekvn
      361 llttlqesqk qlentrgals eqhekigrlt enlnamkklq askecqsald nekdrdshed
      421 gdyyevding peileckykv avaeitdlke elknlkakyk eceskyeeek nkyetesqal
      481 tekitsleks trhdreqmar lekelkkvsd vagetqgsls vaqdelvtfs eelanlyhhv
      541 cmcnnetpnr vmldyykegk ggrsspeakg rrspillskg llnielgkte ngsgdsspsp
      601 vsslpspvsd prkepmniyn liaiirdqik hlqaavdrtt elsrqcvatq elgpvvdkdk
      661 ealmeeilkl ksllstkreq iatlrtvlka nkqtaevala nlkskyenek amvtetmmkl
      721 rnelkalked aatfsslram fatrcdeyvt qldemqrqla aaedekktln sllrmaiqqk
      781 laltqrlehl eldheqskrv rtksaskakg snpsl
//
LOCUS       XP_041323159            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  lysine-specific demethylase PHF2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323159
VERSION     XP_041323159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="lysine-specific demethylase PHF2 isoform X1"
                     /calculated_mol_wt=117748
     Region          7..53
                     /region_name="PHD_PHF2_like"
                     /note="PHD finger found in PHF2, PHF8 and KDM7; cd15554"
                     /db_xref="CDD:277029"
     Site            order(7,14,19..22,29,45..46)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277029"
     Region          201..264
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          236..336
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          340..443
                     /region_name="JHD"
                     /note="Jumonji helical domain; pfam17811"
                     /db_xref="CDD:465515"
     CDS             1..1058
                     /gene="PHF2"
                     /coded_by="XM_041467225.1:568..3744"
                     /db_xref="GeneID:121353406"
ORIGIN      
        1 matvpvycic rlpydvtrfm iecdackdwf hgscvgveee eapdidiyhc pncekthgks
       61 tlkkkrnwhk hdtgqttevk pvqngsqvfi kelrsrtfps aedivvkvpg sqltaeylee
      121 kgfaepilvp kkdglglavp aptfyvsdve nyvgpersvd vtdvtkqkdc kmklkefvdy
      181 yystnrkrvl nvtnlefsdt rmssfveppd ivkklswven ywpddallak pkvtkyclic
      241 vkdsytdfhi dsggasawyh vlkgekifyl ikpasanisl yerwqsaanh semffadqvd
      301 kcykctikqg qtlfipsgwi yatltpvdcl afaghflhsl svemqmraye verrlkivsl
      361 tqfpnfetac wymgkhllek fkglhkagqq ppahllqgak ilngafrswt kkqalaehed
      421 elpenfkpaq likdlakeir lsenaskask adtsanpaae eicpvqkeea pspvqvtppp
      481 ppleklpkkk tpktvktpkq lkpskppkap kspkppktpk vkgegkkkgk kakespppai
      541 pnldlleaht kealtkietp kkgkaaknvl svpnkesvsk qnevekfevr eqnkskteak
      601 wkyknskpds llkmeeehks ektplsgnkd nkftfsfsnk kllgskgvkt hlntsvfgsl
      661 qnfkedkakp vrdeyeyvsd dgelkidefp irrkkntakr elpflsdkke alhhtpvkka
      721 kvesvpykse dssdedllhi dteakpgrns kvkkesgssa gildllqask evggleyntn
      781 sqppaspstq eaiqgmlsma nlqasesclq tswgtnqakn nsfstqnlkk tggggnknag
      841 krllkkstkn sidiedyded qdhldacfkd sdyvypsles dednpvfksr skkrkssdda
      901 pysptarvgp svprqdrpvr egtrvasiet glaaaaakls qqeeqkgkkk kntkkklsap
      961 naskeaqegs spepklesqa ssltdheyta gastfgvaqp nrgsqpmapg vfltqrrpss
     1021 ssqnnasakg krtkkgmata kqrlgkilki hrngklll
//
LOCUS       XP_041323160             960 aa            linear   VRT 06-MAY-2021
DEFINITION  lysine-specific demethylase PHF2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323160
VERSION     XP_041323160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467226.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..960
                     /product="lysine-specific demethylase PHF2 isoform X2"
                     /calculated_mol_wt=107246
     Region          7..53
                     /region_name="PHD_PHF2_like"
                     /note="PHD finger found in PHF2, PHF8 and KDM7; cd15554"
                     /db_xref="CDD:277029"
     Site            order(7,14,19..22,29,45..46)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277029"
     Region          201..264
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          236..336
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          340..443
                     /region_name="JHD"
                     /note="Jumonji helical domain; pfam17811"
                     /db_xref="CDD:465515"
     CDS             1..960
                     /gene="PHF2"
                     /coded_by="XM_041467226.1:568..3450"
                     /db_xref="GeneID:121353406"
ORIGIN      
        1 matvpvycic rlpydvtrfm iecdackdwf hgscvgveee eapdidiyhc pncekthgks
       61 tlkkkrnwhk hdtgqttevk pvqngsqvfi kelrsrtfps aedivvkvpg sqltaeylee
      121 kgfaepilvp kkdglglavp aptfyvsdve nyvgpersvd vtdvtkqkdc kmklkefvdy
      181 yystnrkrvl nvtnlefsdt rmssfveppd ivkklswven ywpddallak pkvtkyclic
      241 vkdsytdfhi dsggasawyh vlkgekifyl ikpasanisl yerwqsaanh semffadqvd
      301 kcykctikqg qtlfipsgwi yatltpvdcl afaghflhsl svemqmraye verrlkivsl
      361 tqfpnfetac wymgkhllek fkglhkagqq ppahllqgak ilngafrswt kkqalaehed
      421 elpenfkpaq likdlakeir lsenaskask adtsanpaae eicpvqkeea pspvqvtppp
      481 ppleklpkkk tpktvktpkq lkpskppkap kspkppktpk vkgegkkkgk kakespppai
      541 pnldlleaht kealtkietp kkgkaaknvl svpnkesvsk qnevekfevr eqnkskteak
      601 wkyknskpds llkmeeehks ektplsgnkd nkftfsfsnk kllgskgvkt hlntsvfgsl
      661 qnfkedkakp vrdeyeyvsd dgelkidefp irrkkntakr elpflsdkke alhhtpvkka
      721 kvesvpykse dssdedllhi dteakpgrns kvkkesgssa gildllqask evggleyntn
      781 sqppaspstq eaiqgmlsma nlqasesclq tswgtnqakn nsfstqnlkk tggggnknag
      841 krllkkstkn sidiedyded qdhldacfkd sdyvypsles dednpvfksr skkrkssdda
      901 pysptarvgp svprqdrpvr egtrvasiet glaaaaakls qqgsvrrrgw prpssgsars
//
LOCUS       XP_041323161             348 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell surface glycoprotein CD1b-3-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323161
VERSION     XP_041323161.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467227.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..348
                     /product="T-cell surface glycoprotein CD1b-3-like isoform
                     X1"
                     /calculated_mol_wt=39108
     Region          26..184
                     /region_name="MHC_I_3"
                     /note="MHC-I family domain; pfam16497"
                     /db_xref="CDD:465144"
     Region          209..301
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          223..227
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409620"
     Region          238..242
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409620"
     Region          271..275
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409620"
     Region          282..287
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409620"
     Region          298..301
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409620"
     CDS             1..348
                     /gene="LOC121353407"
                     /coded_by="XM_041467227.1:16..1062"
                     /db_xref="GeneID:121353407"
ORIGIN      
        1 mqpprlllfl flaillpgmw adpeaepqvi qyllsslvan issaevscva lvgdiailtl
       61 dpanwsihfh wpwvsqaaae gdgekimsqy kivlrnmirf vhdtvqqtkq hyplvlqfra
      121 gcvlypntts qgflsvgwdg rdlvafevdk qgwearqpsq vaelvsksln rqkslrilld
      181 yllsvwvcqs nfltlkrygk eilerqelpv atvfartpsl dqlllvchvt gfyprpisva
      241 wlrdgqevpp gpalntstil pnadltyqlr silavaprdg hsyvcrvrhh slgtrsllip
      301 wenrsaapti sitvavlllv atafaggfww wkrrkgneat wetqefii
//
LOCUS       XP_041323162             347 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell surface glycoprotein CD1b-3-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323162
VERSION     XP_041323162.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467228.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="T-cell surface glycoprotein CD1b-3-like isoform
                     X2"
                     /calculated_mol_wt=39037
     Region          20..183
                     /region_name="MHC_I_3"
                     /note="MHC-I family domain; pfam16497"
                     /db_xref="CDD:465144"
     Region          208..300
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          222..226
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409620"
     Region          237..241
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409620"
     Region          270..274
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409620"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409620"
     Region          297..300
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409620"
     CDS             1..347
                     /gene="LOC121353407"
                     /coded_by="XM_041467228.1:14..1057"
                     /db_xref="GeneID:121353407"
ORIGIN      
        1 mqpprlllfl flaillpgmw adpeepqviq yllsslvani ssaevscval vgdiailtld
       61 panwsihfhw pwvsqaaaeg dgekimsqyk ivlrnmirfv hdtvqqtkqh yplvlqfrag
      121 cvlypnttsq gflsvgwdgr dlvafevdkq gwearqpsqv aelvskslnr qkslrilldy
      181 llsvwvcqsn fltlkrygke ilerqelpva tvfartpsld qlllvchvtg fyprpisvaw
      241 lrdgqevppg palntstilp nadltyqlrs ilavaprdgh syvcrvrhhs lgtrsllipw
      301 enrsaaptis itvavlllva tafaggfwww krrkgneatw etqefii
//
LOCUS       XP_041323163             937 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323163
VERSION     XP_041323163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467229.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..937
                     /product="FYVE, RhoGEF and PH domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=104178
     Region          <12..215
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          367..546
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(371,375,469,497..498,501..502,504..505,508..509,
                     512..513,516,542,546)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          578..685
                     /region_name="PH1_FGD3"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia protein 3, N-terminal Pleckstrin homology (PH)
                     domain; cd13387"
                     /db_xref="CDD:275422"
     Region          739..791
                     /region_name="FYVE_FGD3"
                     /note="FYVE-like domain found in FYVE, RhoGEF and PH
                     domain-containing protein 3 (FGD3) and similar proteins;
                     cd15740"
                     /db_xref="CDD:277279"
     Region          819..923
                     /region_name="PH2_FGD1-4"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia proteins pleckstrin homology (PH) domain,
                     C-terminus; cd13236"
                     /db_xref="CDD:270056"
     CDS             1..937
                     /gene="FGD3"
                     /coded_by="XM_041467229.1:175..2988"
                     /db_xref="GeneID:121353408"
ORIGIN      
        1 mqlqwegeet hpprpaaafv tarpssarsg sgsagarrre qmepegcpcs pfqikchids
       61 spvleacgel qhissapclh qagrkpktkt glakmhplqk pqvppkpvhl kpgqerippa
      121 psrplpadpk ssrslapgee eipisagvnt liekfenirq pvhilqrnql nlalkmepgl
      181 dsskqtslcd rdtvassdss tndkteldea epnipcsmdl tntdimkike lsigdnkshe
      241 dctavtvske sqeelgnkds teelngsgki pnrdsgidsp scsvagetfp seegaeqkkp
      301 smggnpeeme pdrrgtkpss veqkrdstqd ddsdidegss eeqeiaevpk leyldvnkct
      361 epqklfnian ellhteeayv krlhlldqvf ctklseagis sevitgifsn issiycfhgq
      421 fllpelktri tqewsvnprl gdilqklapf lkmygeyvkn fdramdivnt cmqrsspfkd
      481 vvqniqkqev cgnltlqhhm lepvqripry elllkdylkk lpeespdrkd aekslelist
      541 aanhsnaair kmekmhklle vyerlggeed ivnpanelik eghiqklsak ngtaqdrylf
      601 lfnsmvlycv pklrligqkf svrekmdiag lqvqeitkqn vahtfsitgk krslelqart
      661 eeekrewihv iqatiekhkq nsetfrafns sfsqeeehpp dssiastssv esmpgadggg
      721 avggsdssrk sskskrdkek qsckscsesf nsitkrrhhc kqcgavicak csefkpladn
      781 srhnrvckec flqlpaspcs pgvegvgeqk krlaaekqsi lvaenslfss ylqflekgkt
      841 wykmwvtipk seplvlylqg ssqdgrsprp iplpgyevsl pgsgekfdvk hvfklcqshq
      901 tlyfsaedee lqikwmeilt kaakgetedt aeglsnp
//
LOCUS       XP_041323164             843 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323164
VERSION     XP_041323164.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467230.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..843
                     /product="FYVE, RhoGEF and PH domain-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=94132
     Region          273..452
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(277,281,375,403..404,407..408,410..411,414..415,
                     418..419,422,448,452)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          484..591
                     /region_name="PH1_FGD3"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia protein 3, N-terminal Pleckstrin homology (PH)
                     domain; cd13387"
                     /db_xref="CDD:275422"
     Region          645..697
                     /region_name="FYVE_FGD3"
                     /note="FYVE-like domain found in FYVE, RhoGEF and PH
                     domain-containing protein 3 (FGD3) and similar proteins;
                     cd15740"
                     /db_xref="CDD:277279"
     Region          725..829
                     /region_name="PH2_FGD1-4"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia proteins pleckstrin homology (PH) domain,
                     C-terminus; cd13236"
                     /db_xref="CDD:270056"
     CDS             1..843
                     /gene="FGD3"
                     /coded_by="XM_041467230.1:255..2786"
                     /db_xref="GeneID:121353408"
ORIGIN      
        1 mhplqkpqvp pkpvhlkpgq erippapsrp lpadpkssrs lapgeeeipi sagvntliek
       61 fenirqpvhi lqrnqlnlal kmepgldssk qtslcdrdtv assdsstndk teldeaepni
      121 pcsmdltntd imkikelsig dnkshedcta vtvskesqee lgnkdsteel ngsgkipnrd
      181 sgidspscsv agetfpseeg aeqkkpsmgg npeemepdrr gtkpssveqk rdstqdddsd
      241 idegsseeqe iaevpkleyl dvnkctepqk lfnianellh teeayvkrlh lldqvfctkl
      301 seagissevi tgifsnissi ycfhgqfllp elktritqew svnprlgdil qklapflkmy
      361 geyvknfdra mdivntcmqr sspfkdvvqn iqkqevcgnl tlqhhmlepv qripryelll
      421 kdylkklpee spdrkdaeks lelistaanh snaairkmek mhkllevyer lggeedivnp
      481 anelikeghi qklsakngta qdrylflfns mvlycvpklr ligqkfsvre kmdiaglqvq
      541 eitkqnvaht fsitgkkrsl elqarteeek rewihviqat iekhkqnset frafnssfsq
      601 eeehppdssi astssvesmp gadgggavgg sdssrkssks krdkekqsck scsesfnsit
      661 krrhhckqcg avicakcsef kpladnsrhn rvckecflql paspcspgve gvgeqkkrla
      721 aekqsilvae nslfssylqf lekgktwykm wvtipksepl vlylqgssqd grsprpiplp
      781 gyevslpgsg ekfdvkhvfk lcqshqtlyf saedeelqik wmeiltkaak getedtaegl
      841 snp
//
LOCUS       XP_041323165             843 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323165
VERSION     XP_041323165.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467231.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..843
                     /product="FYVE, RhoGEF and PH domain-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=94132
     Region          273..452
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(277,281,375,403..404,407..408,410..411,414..415,
                     418..419,422,448,452)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          484..591
                     /region_name="PH1_FGD3"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia protein 3, N-terminal Pleckstrin homology (PH)
                     domain; cd13387"
                     /db_xref="CDD:275422"
     Region          645..697
                     /region_name="FYVE_FGD3"
                     /note="FYVE-like domain found in FYVE, RhoGEF and PH
                     domain-containing protein 3 (FGD3) and similar proteins;
                     cd15740"
                     /db_xref="CDD:277279"
     Region          725..829
                     /region_name="PH2_FGD1-4"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia proteins pleckstrin homology (PH) domain,
                     C-terminus; cd13236"
                     /db_xref="CDD:270056"
     CDS             1..843
                     /gene="FGD3"
                     /coded_by="XM_041467231.1:160..2691"
                     /db_xref="GeneID:121353408"
ORIGIN      
        1 mhplqkpqvp pkpvhlkpgq erippapsrp lpadpkssrs lapgeeeipi sagvntliek
       61 fenirqpvhi lqrnqlnlal kmepgldssk qtslcdrdtv assdsstndk teldeaepni
      121 pcsmdltntd imkikelsig dnkshedcta vtvskesqee lgnkdsteel ngsgkipnrd
      181 sgidspscsv agetfpseeg aeqkkpsmgg npeemepdrr gtkpssveqk rdstqdddsd
      241 idegsseeqe iaevpkleyl dvnkctepqk lfnianellh teeayvkrlh lldqvfctkl
      301 seagissevi tgifsnissi ycfhgqfllp elktritqew svnprlgdil qklapflkmy
      361 geyvknfdra mdivntcmqr sspfkdvvqn iqkqevcgnl tlqhhmlepv qripryelll
      421 kdylkklpee spdrkdaeks lelistaanh snaairkmek mhkllevyer lggeedivnp
      481 anelikeghi qklsakngta qdrylflfns mvlycvpklr ligqkfsvre kmdiaglqvq
      541 eitkqnvaht fsitgkkrsl elqarteeek rewihviqat iekhkqnset frafnssfsq
      601 eeehppdssi astssvesmp gadgggavgg sdssrkssks krdkekqsck scsesfnsit
      661 krrhhckqcg avicakcsef kpladnsrhn rvckecflql paspcspgve gvgeqkkrla
      721 aekqsilvae nslfssylqf lekgktwykm wvtipksepl vlylqgssqd grsprpiplp
      781 gyevslpgsg ekfdvkhvfk lcqshqtlyf saedeelqik wmeiltkaak getedtaegl
      841 snp
//
LOCUS       XP_041323167             843 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323167
VERSION     XP_041323167.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467233.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..843
                     /product="FYVE, RhoGEF and PH domain-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=94132
     Region          273..452
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(277,281,375,403..404,407..408,410..411,414..415,
                     418..419,422,448,452)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          484..591
                     /region_name="PH1_FGD3"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia protein 3, N-terminal Pleckstrin homology (PH)
                     domain; cd13387"
                     /db_xref="CDD:275422"
     Region          645..697
                     /region_name="FYVE_FGD3"
                     /note="FYVE-like domain found in FYVE, RhoGEF and PH
                     domain-containing protein 3 (FGD3) and similar proteins;
                     cd15740"
                     /db_xref="CDD:277279"
     Region          725..829
                     /region_name="PH2_FGD1-4"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia proteins pleckstrin homology (PH) domain,
                     C-terminus; cd13236"
                     /db_xref="CDD:270056"
     CDS             1..843
                     /gene="FGD3"
                     /coded_by="XM_041467233.1:222..2753"
                     /db_xref="GeneID:121353408"
ORIGIN      
        1 mhplqkpqvp pkpvhlkpgq erippapsrp lpadpkssrs lapgeeeipi sagvntliek
       61 fenirqpvhi lqrnqlnlal kmepgldssk qtslcdrdtv assdsstndk teldeaepni
      121 pcsmdltntd imkikelsig dnkshedcta vtvskesqee lgnkdsteel ngsgkipnrd
      181 sgidspscsv agetfpseeg aeqkkpsmgg npeemepdrr gtkpssveqk rdstqdddsd
      241 idegsseeqe iaevpkleyl dvnkctepqk lfnianellh teeayvkrlh lldqvfctkl
      301 seagissevi tgifsnissi ycfhgqfllp elktritqew svnprlgdil qklapflkmy
      361 geyvknfdra mdivntcmqr sspfkdvvqn iqkqevcgnl tlqhhmlepv qripryelll
      421 kdylkklpee spdrkdaeks lelistaanh snaairkmek mhkllevyer lggeedivnp
      481 anelikeghi qklsakngta qdrylflfns mvlycvpklr ligqkfsvre kmdiaglqvq
      541 eitkqnvaht fsitgkkrsl elqarteeek rewihviqat iekhkqnset frafnssfsq
      601 eeehppdssi astssvesmp gadgggavgg sdssrkssks krdkekqsck scsesfnsit
      661 krrhhckqcg avicakcsef kpladnsrhn rvckecflql paspcspgve gvgeqkkrla
      721 aekqsilvae nslfssylqf lekgktwykm wvtipksepl vlylqgssqd grsprpiplp
      781 gyevslpgsg ekfdvkhvfk lcqshqtlyf saedeelqik wmeiltkaak getedtaegl
      841 snp
//
LOCUS       XP_041323168             843 aa            linear   VRT 06-MAY-2021
DEFINITION  FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323168
VERSION     XP_041323168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467234.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..843
                     /product="FYVE, RhoGEF and PH domain-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=94132
     Region          273..452
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(277,281,375,403..404,407..408,410..411,414..415,
                     418..419,422,448,452)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          484..591
                     /region_name="PH1_FGD3"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia protein 3, N-terminal Pleckstrin homology (PH)
                     domain; cd13387"
                     /db_xref="CDD:275422"
     Region          645..697
                     /region_name="FYVE_FGD3"
                     /note="FYVE-like domain found in FYVE, RhoGEF and PH
                     domain-containing protein 3 (FGD3) and similar proteins;
                     cd15740"
                     /db_xref="CDD:277279"
     Region          725..829
                     /region_name="PH2_FGD1-4"
                     /note="FYVE, RhoGEF and PH domain containing/faciogenital
                     dysplasia proteins pleckstrin homology (PH) domain,
                     C-terminus; cd13236"
                     /db_xref="CDD:270056"
     CDS             1..843
                     /gene="FGD3"
                     /coded_by="XM_041467234.1:190..2721"
                     /db_xref="GeneID:121353408"
ORIGIN      
        1 mhplqkpqvp pkpvhlkpgq erippapsrp lpadpkssrs lapgeeeipi sagvntliek
       61 fenirqpvhi lqrnqlnlal kmepgldssk qtslcdrdtv assdsstndk teldeaepni
      121 pcsmdltntd imkikelsig dnkshedcta vtvskesqee lgnkdsteel ngsgkipnrd
      181 sgidspscsv agetfpseeg aeqkkpsmgg npeemepdrr gtkpssveqk rdstqdddsd
      241 idegsseeqe iaevpkleyl dvnkctepqk lfnianellh teeayvkrlh lldqvfctkl
      301 seagissevi tgifsnissi ycfhgqfllp elktritqew svnprlgdil qklapflkmy
      361 geyvknfdra mdivntcmqr sspfkdvvqn iqkqevcgnl tlqhhmlepv qripryelll
      421 kdylkklpee spdrkdaeks lelistaanh snaairkmek mhkllevyer lggeedivnp
      481 anelikeghi qklsakngta qdrylflfns mvlycvpklr ligqkfsvre kmdiaglqvq
      541 eitkqnvaht fsitgkkrsl elqarteeek rewihviqat iekhkqnset frafnssfsq
      601 eeehppdssi astssvesmp gadgggavgg sdssrkssks krdkekqsck scsesfnsit
      661 krrhhckqcg avicakcsef kpladnsrhn rvckecflql paspcspgve gvgeqkkrla
      721 aekqsilvae nslfssylqf lekgktwykm wvtipksepl vlylqgssqd grsprpiplp
      781 gyevslpgsg ekfdvkhvfk lcqshqtlyf saedeelqik wmeiltkaak getedtaegl
      841 snp
//
LOCUS       XP_041323169             246 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein BarH-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323169
VERSION     XP_041323169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="homeobox protein BarH-like 1"
                     /calculated_mol_wt=26835
     Region          135..191
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..246
                     /gene="BARX1"
                     /coded_by="XM_041467235.1:126..866"
                     /db_xref="GeneID:121353410"
ORIGIN      
        1 mqhplelgaa ryfpaeafpd hrshryrsfm ieeiltdppd akgaapagel lkfgvqalls
       61 arpyhnhlav lkaepaavfk fplaplgcsg lgsallaags glqggsasph lplelhlrgk
      121 lepgppepgk akkgrrsrtv ftelqlmgle krfekqkyls tpdridlaes lglsqlqvkt
      181 wyqnrrmkwk kivlqgggle sptkpkgrpk knsipsseql seqerardae kppeslgspa
      241 evsqee
//
LOCUS       XP_041323170             499 aa            linear   VRT 06-MAY-2021
DEFINITION  sushi domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323170
VERSION     XP_041323170.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467236.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..499
                     /product="sushi domain-containing protein 3"
                     /calculated_mol_wt=53614
     Region          264..324
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(274,294)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..499
                     /gene="SUSD3"
                     /coded_by="XM_041467236.1:1..1500"
                     /db_xref="GeneID:121353411"
ORIGIN      
        1 mdkstekqen cerdgpylpc llrtistres gpalhssndv emrlvalgsv psqniqhsqv
       61 rnlspamama dvkehvwmcd cqlpntqryp klemaaeedr qrvggrqesg qaadrfgrag
      121 segqavclas rplhhprpaa rgerrgpgkg qakargcqgt alsraprlgc agpewpllsl
      181 rcpscparrg sagwavprcs prpgpggrag aaagavhllg gsarrdsaal ggampaattl
      241 gldsqrtsal grdsggprgh tgqcrrllpp plgslrvlhg sgtdvgtvva frcsaelqlq
      301 gpdivtcvwk gngtqwtagv psckpiskye tfgfkvavia sivscavill msmafltccl
      361 ikcakksekr raqremqlwy qlrteelehm qaayfgfkgr nnnnnskklr ntsvfgdvtd
      421 maydnqgfyr sqeertqdvv vgcckdssdl lkvakssgap gahmvlrhnt alqtvnsihv
      481 vevyshkdsy nkptcqlpg
//
LOCUS       XP_041323171             405 aa            linear   VRT 06-MAY-2021
DEFINITION  antigen-presenting glycoprotein CD1d-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323171
VERSION     XP_041323171.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467237.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="antigen-presenting glycoprotein CD1d-like"
                     /calculated_mol_wt=45487
     Region          29..201
                     /region_name="MHC_I_3"
                     /note="MHC-I family domain; pfam16497"
                     /db_xref="CDD:465144"
     Region          209..301
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          223..227
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409620"
     Region          238..242
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409620"
     Region          271..275
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409620"
     Region          282..287
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409620"
     Region          298..301
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409620"
     CDS             1..405
                     /gene="LOC121353412"
                     /coded_by="XM_041467237.1:35..1252"
                     /db_xref="GeneID:121353412"
ORIGIN      
        1 mqspccclls lllylfllsg twanldgtft irllqtttfq ntsfadvegl glledielgf
       61 ldkhtwsirf cqpwvrpalp hadwdtienl lkiywhkfny linegamqrd ipypfvvqct
      121 agcmlypnkt srafgyvgyn gqdflsfdtk nltwtlsqdt elsqsvqsfl qnytalgelv
      181 ealfndtcvd dlevllhfgr aalerqelpv atvfartpsl dqlllvchvt gfyprpisva
      241 wlrdgqevpp gpalntstil pnadltyqlr silavaprdg hsyvcrvrhh slgtrsllip
      301 wgrchpwgmr wgscttlpdq meqtpecswq lllmfprelr sgadhrargr aacshgrscr
      361 vgalgvetkk apadggirvq elhpeqrsla qkransphsl plptq
//
LOCUS       XP_041323172             269 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-anchored junction protein [Pyrgilauda ruficollis].
ACCESSION   XP_041323172
VERSION     XP_041323172.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467238.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="membrane-anchored junction protein"
                     /calculated_mol_wt=30645
     Region          1..>151
                     /region_name="MAJIN"
                     /note="Membrane-anchored junction protein; pfam15077"
                     /db_xref="CDD:464488"
     CDS             1..269
                     /gene="MAJIN"
                     /coded_by="XM_041467238.1:1..810"
                     /db_xref="GeneID:121353413"
ORIGIN      
        1 mslkpftypl petrflhagk hvykfkiryg nfnsspnfgl tesaakesee virvilgnld
       61 dlhpfstdhf tvfpylskwe qvskmkfkhe nvhlvpypyi ctlylelisf qrniscgkev
      121 nkgsdelvrr rnemsestam keavkrrrve vrddtscpqs cmdgtgaycv hhmskaeqgf
      181 eknsskanel efspasltkd cdqlsfwgpv efgheqkrva seaksavqll qqmdqtgkkg
      241 nmksegrgls qfwrsiifsp lqhlfggkn
//
LOCUS       XP_041323173             813 aa            linear   VRT 06-MAY-2021
DEFINITION  protein tyrosine phosphatase domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323173
VERSION     XP_041323173.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467239.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="protein tyrosine phosphatase domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=91869
     Region          153..358
                     /region_name="PTP_PTPDC1"
                     /note="protein tyrosine phosphatase domain of PTP
                     domain-containing protein 1; cd14506"
                     /db_xref="CDD:350356"
     CDS             1..813
                     /gene="PTPDC1"
                     /coded_by="XM_041467239.1:533..2974"
                     /db_xref="GeneID:121353414"
ORIGIN      
        1 mlrsapatsa lsnfpcaqsa pgsgagrswg raamqpsprr rsavsifshf fqgrrhsssd
       61 pllrlsqrrr ssvvellsss thrvmvalss lspeeldatf pekkrssrrp takytkvger
      121 lrhvipghmq csmacggrac kyenparwae heqaikglys switdnilam arpsteliek
      181 yniieqferc giktiinlqr pgehascgnp leqesgftyl peafmeagiy fynfgwkdyg
      241 vaslttildm vkvmsfalqe grvavhchag lgrtgvliac ylvfatrmsa dqailfvrak
      301 rpnsiqtrgq llcvrefsqf lvplrnvfac cepkahavtl sqyltrqrhl lhgyesrhlk
      361 hvpklihlvc kllldlaenr qvveaelldi pdlsaeiekt vsqlsstele relarhdsdm
      421 sdssntyssa ldsqdshssl gyecdafckr rnveflqplt hlrrrlsyse sdlrrtefll
      481 eqddtawtvp aqilvnnkpk qnsgeecsat geakpqleln kealvrntcm fwsqgrfsld
      541 grrdgsyhrk sstkevqrsr tfssdlasmh dpkepgmprh sfanetahrk dhktniygrr
      601 vylsedsdss sssskvnfsi gyesessrel setiphivlq selslearrv laakaladin
      661 eflgedevkq kvemwqkeln sqdgawdkic terdpfilcs lmwswieqlk epiiskddid
      721 mlaknctksq dalyllrkeq cqtilcilhc vvklqvlpad veeavlarai kaftktsfns
      781 edgpyvyntl ktvfkqalee krkrikegte nps
//
LOCUS       XP_041323174             737 aa            linear   VRT 06-MAY-2021
DEFINITION  protein tyrosine phosphatase domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323174
VERSION     XP_041323174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..737
                     /product="protein tyrosine phosphatase domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=83461
     Region          77..282
                     /region_name="PTP_PTPDC1"
                     /note="protein tyrosine phosphatase domain of PTP
                     domain-containing protein 1; cd14506"
                     /db_xref="CDD:350356"
     CDS             1..737
                     /gene="PTPDC1"
                     /coded_by="XM_041467240.1:33..2246"
                     /db_xref="GeneID:121353414"
ORIGIN      
        1 maagvllqne qpyssliess vylanmssgs srrptakytk vgerlrhvip ghmqcsmacg
       61 grackyenpa rwaeheqaik glysswitdn ilamarpste liekyniieq fercgiktii
      121 nlqrpgehas cgnpleqesg ftylpeafme agiyfynfgw kdygvasltt ildmvkvmsf
      181 alqegrvavh chaglgrtgv liacylvfat rmsadqailf vrakrpnsiq trgqllcvre
      241 fsqflvplrn vfaccepkah avtlsqyltr qrhllhgyes rhlkhvpkli hlvckllldl
      301 aenrqvveae lldipdlsae iektvsqlss telerelarh dsdmsdssnt yssaldsqds
      361 hsslgyecda fckrrnvefl qplthlrrrl sysesdlrrt eflleqddta wtvpaqilvn
      421 nkpkqnsgee csatgeakpq lelnkealvr ntcmfwsqgr fsldgrrdgs yhrksstkev
      481 qrsrtfssdl asmhdpkepg mprhsfanet ahrkdhktni ygrrvylsed sdsssssskv
      541 nfsigyeses srelsetiph ivlqselsle arrvlaakal adineflged evkqkvemwq
      601 kelnsqdgaw dkicterdpf ilcslmwswi eqlkepiisk ddidmlaknc tksqdalyll
      661 rkeqcqtilc ilhcvvklqv lpadveeavl araikaftkt sfnsedgpyv yntlktvfkq
      721 aleekrkrik egtenps
//
LOCUS       XP_041323175             185 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase recruitment domain-containing protein 19 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323175
VERSION     XP_041323175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467241.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="caspase recruitment domain-containing protein 19
                     isoform X1"
                     /calculated_mol_wt=21668
     Region          13..98
                     /region_name="CARD_BinCARD_like"
                     /note="BinCARD (Bcl10-interacting protein with CARD);
                     cd13785"
                     /db_xref="CDD:260079"
     Site            order(28,32,52)
                     /site_type="other"
                     /note="putative Bcl10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260079"
     CDS             1..185
                     /gene="CARD19"
                     /coded_by="XM_041467241.1:137..694"
                     /db_xref="GeneID:121353416"
ORIGIN      
        1 mlyrsyqsyc hrlqhdmyfl tstsrlneqv vdkivlqlnr vypqiltnee aekfrnpkas
       61 lhtrlsdllk hlqkkgdrhc qefyralqin aeqlfndlps rkilktsdpt eidtdkeqym
      121 lndrgpvffl acfsvaagla lfwyccnset qvigrarril gfspiiigrh vrnicmlyle
      181 dmsrn
//
LOCUS       XP_041323176             182 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase recruitment domain-containing protein 19 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323176
VERSION     XP_041323176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467242.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="caspase recruitment domain-containing protein 19
                     isoform X2"
                     /calculated_mol_wt=21171
     Region          10..95
                     /region_name="CARD_BinCARD_like"
                     /note="BinCARD (Bcl10-interacting protein with CARD);
                     cd13785"
                     /db_xref="CDD:260079"
     Site            order(25,29,49)
                     /site_type="other"
                     /note="putative Bcl10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260079"
     CDS             1..182
                     /gene="CARD19"
                     /coded_by="XM_041467242.1:64..612"
                     /db_xref="GeneID:121353416"
ORIGIN      
        1 madqsychrl qhdmyfltst srlneqvvdk ivlqlnrvyp qiltneeaek frnpkaslht
       61 rlsdllkhlq kkgdrhcqef yralqinaeq lfndlpsrki lktsdpteid tdkeqymlnd
      121 rgpvfflacf svaaglalfw yccnsetqvi grarrilgfs piiigrhvrn icmlyledms
      181 rn
//
LOCUS       XP_041323177             182 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase recruitment domain-containing protein 19 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323177
VERSION     XP_041323177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467243.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="caspase recruitment domain-containing protein 19
                     isoform X3"
                     /calculated_mol_wt=21257
     Region          10..95
                     /region_name="CARD_BinCARD_like"
                     /note="BinCARD (Bcl10-interacting protein with CARD);
                     cd13785"
                     /db_xref="CDD:260079"
     Site            order(25,29,49)
                     /site_type="other"
                     /note="putative Bcl10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260079"
     CDS             1..182
                     /gene="CARD19"
                     /coded_by="XM_041467243.1:68..616"
                     /db_xref="GeneID:121353416"
ORIGIN      
        1 mrdqsychrl qhdmyfltst srlneqvvdk ivlqlnrvyp qiltneeaek frnpkaslht
       61 rlsdllkhlq kkgdrhcqef yralqinaeq lfndlpsrki lktsdpteid tdkeqymlnd
      121 rgpvfflacf svaaglalfw yccnsetqvi grarrilgfs piiigrhvrn icmlyledms
      181 rn
//
LOCUS       XP_041323178             165 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase recruitment domain-containing protein 19 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323178
VERSION     XP_041323178.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467244.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="caspase recruitment domain-containing protein 19
                     isoform X4"
                     /calculated_mol_wt=19316
     Region          13..98
                     /region_name="CARD_BinCARD_like"
                     /note="BinCARD (Bcl10-interacting protein with CARD);
                     cd13785"
                     /db_xref="CDD:260079"
     Site            order(28,32,52)
                     /site_type="other"
                     /note="putative Bcl10 interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:260079"
     CDS             1..165
                     /gene="CARD19"
                     /coded_by="XM_041467244.1:137..634"
                     /db_xref="GeneID:121353416"
ORIGIN      
        1 mlyrsyqsyc hrlqhdmyfl tstsrlneqv vdkivlqlnr vypqiltnee aekfrnpkas
       61 lhtrlsdllk hlqkkgdrhc qefyralqin aeqlfndlps rkilspvffl acfsvaagla
      121 lfwyccnset qvigrarril gfspiiigrh vrnicmlyle dmsrn
//
LOCUS       XP_041323179             153 aa            linear   VRT 06-MAY-2021
DEFINITION  ninjurin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323179
VERSION     XP_041323179.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467245.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519541.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..153
                     /product="ninjurin-1"
                     /calculated_mol_wt=16911
     Region          39..140
                     /region_name="Ninjurin"
                     /note="pfam04923"
                     /db_xref="CDD:461482"
     CDS             1..153
                     /gene="NINJ1"
                     /coded_by="XM_041467245.1:112..573"
                     /db_xref="GeneID:121353418"
ORIGIN      
        1 mdsgsethel ngtaegaesa aeeqrrrwqw fqrnrpinin hyankksaae smldiallma
       61 nasqlkavme qgpsfsfyip liilislslt lqimvgvlli flvkydlnnp akhgklnfln
      121 nlatglvfii vvvnifitaf gvqkpvaepi srq
//
LOCUS       XP_041323181            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323181
VERSION     XP_041323181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467247.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X1"
                     /calculated_mol_wt=141263
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <972..>1102
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1317
                     /gene="EMSY"
                     /coded_by="XM_041467247.1:194..4147"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqglcwchi myewtvfqac qlapessvsp fctdsqpvvh viasrsqdws
      781 eheipvdtnp tiiyqdvsse sqsatstika llelqqttvv kekleskprq ptidlsqmav
      841 piqmtqekrh spespsiavv eselvaeyit tdsgrqhcig shseeylhnh ivshrsqphq
      901 ssqpqrtlvq hvaqsqtatq tsvvvksipa sstgaithim qqalsshtaf tkhseqlgte
      961 egeveemdtl dpqtglfyrs altqsqaqkq qklsqpqleq tqlqvktlqc fqtkqkqtih
     1021 lqadqiqhkl pqmpqlsirh qkltplqqeq aqtkpdaqhp phhmmakerq lptlvaqpqq
     1081 tvvqvlavkt tqqlpklqqa ptaqkiyvqp qppqsqmqlp assekqpasq aptetsvadm
     1141 lrvsmveaqi daniehtivd ppnkatstsk aaseaesspc tqgprvaavg mtapsipqqq
     1201 thtesssspp avgptlterk ldaqgipttn qfihiqnisq kkaeesssei vvqtiphypi
     1261 pchsssnvvv epsgllelnn ftsqrlddee tameqdvdss tedgtepsps qssveqs
//
LOCUS       XP_041323182            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323182
VERSION     XP_041323182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X1"
                     /calculated_mol_wt=141263
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <972..>1102
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1317
                     /gene="EMSY"
                     /coded_by="XM_041467248.1:566..4519"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqglcwchi myewtvfqac qlapessvsp fctdsqpvvh viasrsqdws
      781 eheipvdtnp tiiyqdvsse sqsatstika llelqqttvv kekleskprq ptidlsqmav
      841 piqmtqekrh spespsiavv eselvaeyit tdsgrqhcig shseeylhnh ivshrsqphq
      901 ssqpqrtlvq hvaqsqtatq tsvvvksipa sstgaithim qqalsshtaf tkhseqlgte
      961 egeveemdtl dpqtglfyrs altqsqaqkq qklsqpqleq tqlqvktlqc fqtkqkqtih
     1021 lqadqiqhkl pqmpqlsirh qkltplqqeq aqtkpdaqhp phhmmakerq lptlvaqpqq
     1081 tvvqvlavkt tqqlpklqqa ptaqkiyvqp qppqsqmqlp assekqpasq aptetsvadm
     1141 lrvsmveaqi daniehtivd ppnkatstsk aaseaesspc tqgprvaavg mtapsipqqq
     1201 thtesssspp avgptlterk ldaqgipttn qfihiqnisq kkaeesssei vvqtiphypi
     1261 pchsssnvvv epsgllelnn ftsqrlddee tameqdvdss tedgtepsps qssveqs
//
LOCUS       XP_041323183            1316 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323183
VERSION     XP_041323183.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467249.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1316
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X2"
                     /calculated_mol_wt=141164
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <971..>1101
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1316
                     /gene="EMSY"
                     /coded_by="XM_041467249.1:194..4144"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqglcwchi myewtvfqac qlapessvsp fctdsqpvvh viasrsqdws
      781 eheipvdtnp tiiyqdvsse sqsatstika llelqqttvk ekleskprqp tidlsqmavp
      841 iqmtqekrhs pespsiavve selvaeyitt dsgrqhcigs hseeylhnhi vshrsqphqs
      901 sqpqrtlvqh vaqsqtatqt svvvksipas stgaithimq qalsshtaft khseqlgtee
      961 geveemdtld pqtglfyrsa ltqsqaqkqq klsqpqleqt qlqvktlqcf qtkqkqtihl
     1021 qadqiqhklp qmpqlsirhq kltplqqeqa qtkpdaqhpp hhmmakerql ptlvaqpqqt
     1081 vvqvlavktt qqlpklqqap taqkiyvqpq ppqsqmqlpa ssekqpasqa ptetsvadml
     1141 rvsmveaqid aniehtivdp pnkatstska aseaesspct qgprvaavgm tapsipqqqt
     1201 htessssppa vgptlterkl daqgipttnq fihiqnisqk kaeessseiv vqtiphypip
     1261 chsssnvvve psgllelnnf tsqrlddeet ameqdvdsst edgtepspsq ssveqs
//
LOCUS       XP_041323184            1297 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323184
VERSION     XP_041323184.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467250.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1297
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X3"
                     /calculated_mol_wt=138962
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     CDS             1..1297
                     /gene="EMSY"
                     /coded_by="XM_041467250.1:194..4087"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqglcwchi myewtvfqac qlapessvsp fctdsqpvvh viasrsqdws
      781 eheipvdtnp tiiyqdvsse sqsatstika llelqqttvv kekleskprq ptidlsqmav
      841 piqmtqekrh spespsiavv eselvaeyit tvshrsqphq ssqpqrtlvq hvaqsqtatq
      901 tsvvvksipa sstgaithim qqalsshtaf tkhseqlgte egeveemdtl dpqtglfyrs
      961 altqsqaqkq qklsqpqleq tqlqvktlqc fqtkqkqtih lqadqiqhkl pqmpqlsirh
     1021 qkltplqqeq aqtkpdaqhp phhmmakerq lptlvaqpqq tvvqvlavkt tqqlpklqqa
     1081 ptaqkiyvqp qppqsqmqlp assekqpasq aptetsvadm lrvsmveaqi daniehtivd
     1141 ppnkatstsk aaseaesspc tqgprvaavg mtapsipqqq thtesssspp avgptlterk
     1201 ldaqgipttn qfihiqnisq kkaeesssei vvqtiphypi pchsssnvvv epsgllelnn
     1261 ftsqrlddee tameqdvdss tedgtepsps qssveqs
//
LOCUS       XP_041323185            1287 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323185
VERSION     XP_041323185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1287
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X4"
                     /calculated_mol_wt=137843
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     CDS             1..1287
                     /gene="EMSY"
                     /coded_by="XM_041467251.1:194..4057"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqdsqpvvh viasrsqdws eheipvdtnp tiiyqdvsse sqsatstika
      781 llelqqttvv kekleskprq ptidlsqmav piqmtqekrh spespsiavv eselvaeyit
      841 tdsgrqhcig shseeylhnh ivshrsqphq ssqpqrtlvq hvaqsqtatq tsvvvksipa
      901 sstgaithim qqalsshtaf tkhseqlgte egeveemdtl dpqtglfyrs altqsqaqkq
      961 qklsqpqleq tqlqvktlqc fqtkqkqtih lqadqiqhkl pqmpqlsirh qkltplqqeq
     1021 aqtkpdaqhp phhmmakerq lptlvaqpqq tvvqvlavkt tqqlpklqqa ptaqkiyvqp
     1081 qppqsqmqlp assekqpasq aptetsvadm lrvsmveaqi daniehtivd ppnkatstsk
     1141 aaseaesspc tqgprvaavg mtapsipqqq thtesssspp avgptlterk ldaqgipttn
     1201 qfihiqnisq kkaeesssei vvqtiphypi pchsssnvvv epsgllelnn ftsqrlddee
     1261 tameqdvdss tedgtepsps qssveqs
//
LOCUS       XP_041323186            1286 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323186
VERSION     XP_041323186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1286
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X5"
                     /calculated_mol_wt=137744
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     CDS             1..1286
                     /gene="EMSY"
                     /coded_by="XM_041467252.1:194..4054"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqdsqpvvh viasrsqdws eheipvdtnp tiiyqdvsse sqsatstika
      781 llelqqttvk ekleskprqp tidlsqmavp iqmtqekrhs pespsiavve selvaeyitt
      841 dsgrqhcigs hseeylhnhi vshrsqphqs sqpqrtlvqh vaqsqtatqt svvvksipas
      901 stgaithimq qalsshtaft khseqlgtee geveemdtld pqtglfyrsa ltqsqaqkqq
      961 klsqpqleqt qlqvktlqcf qtkqkqtihl qadqiqhklp qmpqlsirhq kltplqqeqa
     1021 qtkpdaqhpp hhmmakerql ptlvaqpqqt vvqvlavktt qqlpklqqap taqkiyvqpq
     1081 ppqsqmqlpa ssekqpasqa ptetsvadml rvsmveaqid aniehtivdp pnkatstska
     1141 aseaesspct qgprvaavgm tapsipqqqt htessssppa vgptlterkl daqgipttnq
     1201 fihiqnisqk kaeessseiv vqtiphypip chsssnvvve psgllelnnf tsqrlddeet
     1261 ameqdvdsst edgtepspsq ssveqs
//
LOCUS       XP_041323187            1267 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323187
VERSION     XP_041323187.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467253.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1267
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X6"
                     /calculated_mol_wt=136088
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <922..>1052
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1267
                     /gene="EMSY"
                     /coded_by="XM_041467253.1:194..3997"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgtqat ytrptvspsl garmagtpga
      481 atyvkttsgs iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg
      541 ttiqglpgkn vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa
      601 tkiiptkivy gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe
      661 vkeepqtytd ssssstessq ssqglcwchi myewtvfqac qlapessvsp fctdsqpvvh
      721 viasrsqdws eheipvdtnp tiiyqdvsse sqsatstika llelqqttvv kekleskprq
      781 ptidlsqmav piqmtqekrh spespsiavv eselvaeyit tdsgrqhcig shseeylhnh
      841 ivshrsqphq ssqpqrtlvq hvaqsqtatq tsvvvksipa sstgaithim qqalsshtaf
      901 tkhseqlgte egeveemdtl dpqtglfyrs altqsqaqkq qklsqpqleq tqlqvktlqc
      961 fqtkqkqtih lqadqiqhkl pqmpqlsirh qkltplqqeq aqtkpdaqhp phhmmakerq
     1021 lptlvaqpqq tvvqvlavkt tqqlpklqqa ptaqkiyvqp qppqsqmqlp assekqpasq
     1081 aptetsvadm lrvsmveaqi daniehtivd ppnkatstsk aaseaesspc tqgprvaavg
     1141 mtapsipqqq thtesssspp avgptlterk ldaqgipttn qfihiqnisq kkaeesssei
     1201 vvqtiphypi pchsssnvvv epsgllelnn ftsqrlddee tameqdvdss tedgtepsps
     1261 qssveqs
//
LOCUS       XP_041323188            1266 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323188
VERSION     XP_041323188.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467254.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1266
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X7"
                     /calculated_mol_wt=135443
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     CDS             1..1266
                     /gene="EMSY"
                     /coded_by="XM_041467254.1:194..3994"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqdsqpvvh viasrsqdws eheipvdtnp tiiyqdvsse sqsatstika
      781 llelqqttvk ekleskprqp tidlsqmavp iqmtqekrhs pespsiavve selvaeyitt
      841 vshrsqphqs sqpqrtlvqh vaqsqtatqt svvvksipas stgaithimq qalsshtaft
      901 khseqlgtee geveemdtld pqtglfyrsa ltqsqaqkqq klsqpqleqt qlqvktlqcf
      961 qtkqkqtihl qadqiqhklp qmpqlsirhq kltplqqeqa qtkpdaqhpp hhmmakerql
     1021 ptlvaqpqqt vvqvlavktt qqlpklqqap taqkiyvqpq ppqsqmqlpa ssekqpasqa
     1081 ptetsvadml rvsmveaqid aniehtivdp pnkatstska aseaesspct qgprvaavgm
     1141 tapsipqqqt htessssppa vgptlterkl daqgipttnq fihiqnisqk kaeessseiv
     1201 vqtiphypip chsssnvvve psgllelnnf tsqrlddeet ameqdvdsst edgtepspsq
     1261 ssveqs
//
LOCUS       XP_041323190            1266 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323190
VERSION     XP_041323190.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467256.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1266
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X8"
                     /calculated_mol_wt=136137
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <419..521
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <921..>1051
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1266
                     /gene="EMSY"
                     /coded_by="XM_041467256.1:194..3994"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke gvscsdddek prkrrrtnss ssspvllkev pkavtpvtkt
      181 itvpvsgspk msnimqsian slpphmspvk itftkpstqt tntttqkvii vttspsstfv
      241 pnilskshny aavtklvpts viasttqkqp vvitasqssv gsssscstps ctantiavta
      301 vvsstpsvvm stvaqgvsts avkvastrlp spkglvgnpt qilaqfpkqh qqspkqqlhq
      361 vqqaqqqqqp qqqqlvpcsv aqqqpqqsql pagikptiqi kqesgvkiit qqvqpskilp
      421 kpvtatlpss snspimvvss ngtimttklv ttptgtqaty trptvspslg armagtpgaa
      481 tyvkttsgsi itvvpkslat lggkiissni vsgtttkitt ipmtskpnvi vvqkttgkgt
      541 tiqglpgknv vttllnagge ktiqavpaga kpaiitatrp itkmivtqpk gigstvqpat
      601 kiiptkivyg qqgktqvlik pkpvtfqatv vseqtrqlvt etlqqasrva etgnsslpev
      661 keepqtytds sssstessqs sqglcwchim yewtvfqacq lapessvspf ctdsqpvvhv
      721 iasrsqdwse heipvdtnpt iiyqdvsses qsatstikal lelqqttvvk ekleskprqp
      781 tidlsqmavp iqmtqekrhs pespsiavve selvaeyitt dsgrqhcigs hseeylhnhi
      841 vshrsqphqs sqpqrtlvqh vaqsqtatqt svvvksipas stgaithimq qalsshtaft
      901 khseqlgtee geveemdtld pqtglfyrsa ltqsqaqkqq klsqpqleqt qlqvktlqcf
      961 qtkqkqtihl qadqiqhklp qmpqlsirhq kltplqqeqa qtkpdaqhpp hhmmakerql
     1021 ptlvaqpqqt vvqvlavktt qqlpklqqap taqkiyvqpq ppqsqmqlpa ssekqpasqa
     1081 ptetsvadml rvsmveaqid aniehtivdp pnkatstska aseaesspct qgprvaavgm
     1141 tapsipqqqt htessssppa vgptlterkl daqgipttnq fihiqnisqk kaeessseiv
     1201 vqtiphypip chsssnvvve psgllelnnf tsqrlddeet ameqdvdsst edgtepspsq
     1261 ssveqs
//
LOCUS       XP_041323191            1259 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323191
VERSION     XP_041323191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1259
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X9"
                     /calculated_mol_wt=135254
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <914..>1044
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1259
                     /gene="EMSY"
                     /coded_by="XM_041467257.1:194..3973"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagv likpkpvtfq atvvseqtrq lvtetlqqas rvaetgnssl pevkeepqty
      661 tdssssstes sqssqglcwc himyewtvfq acqlapessv spfctdsqpv vhviasrsqd
      721 wseheipvdt nptiiyqdvs sesqsatsti kallelqqtt vvkekleskp rqptidlsqm
      781 avpiqmtqek rhspespsia vveselvaey ittdsgrqhc igshseeylh nhivshrsqp
      841 hqssqpqrtl vqhvaqsqta tqtsvvvksi passtgaith imqqalssht aftkhseqlg
      901 teegeveemd tldpqtglfy rsaltqsqaq kqqklsqpql eqtqlqvktl qcfqtkqkqt
      961 ihlqadqiqh klpqmpqlsi rhqkltplqq eqaqtkpdaq hpphhmmake rqlptlvaqp
     1021 qqtvvqvlav kttqqlpklq qaptaqkiyv qpqppqsqmq lpassekqpa sqaptetsva
     1081 dmlrvsmvea qidaniehti vdppnkatst skaaseaess pctqgprvaa vgmtapsipq
     1141 qqthtessss ppavgptlte rkldaqgipt tnqfihiqni sqkkaeesss eivvqtiphy
     1201 pipchsssnv vvepsgllel nnftsqrldd eetameqdvd sstedgteps psqssveqs
//
LOCUS       XP_041323192            1235 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323192
VERSION     XP_041323192.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467258.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1235
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X10"
                     /calculated_mol_wt=131944
     Region          <388..490
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     CDS             1..1235
                     /gene="EMSY"
                     /coded_by="XM_041467258.1:189..3896"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 msgpnsssew siegrrlvpl mprlvpqtaf tvtanavana aiqhnaslpv paetgnkevv
       61 vcysytstts tptstpvpsg svatvksprp aspasnvvvl psgstvyvks vscsdddekp
      121 rkrrrtnsss sspvllkevp kavtpvtkti tvpvsgspkm snimqsians lpphmspvki
      181 tftkpstqtt ntttqkviiv ttspsstfvp nilskshnya avtklvptsv iasttqkqpv
      241 vitasqssvg sssscstpsc tantiavtav vsstpsvvms tvaqgvstsa vkvastrlps
      301 pkglvgnptq ilaqfpkqhq qspkqqlhqv qqaqqqqqpq qqqlvpcsva qqqpqqsqlp
      361 agikptiqik qesgvkiitq qvqpskilpk pvtatlpsss nspimvvssn gtimttklvt
      421 tptgtqatyt rptvspslga rmagtpgaat yvkttsgsii tvvpkslatl ggkiissniv
      481 sgtttkitti pmtskpnviv vqkttgkgtt iqglpgknvv ttllnaggek tiqavpagak
      541 paiitatrpi tkmivtqpkg igstvqpatk iiptkivygq qgktqvlikp kpvtfqatvv
      601 seqtrqlvte tlqqasrvae tgnsslpevk eepqtytdss ssstessqss qglcwchimy
      661 ewtvfqacql apessvspfc tdsqpvvhvi asrsqdwseh eipvdtnpti iyqdvssesq
      721 satstikall elqqttvvke kleskprqpt idlsqmavpi qmtqekrhsp espsiavves
      781 elvaeyittd sgrqhcigsh seeylhnhiv shrsqphqss qpqrtlvqhv aqsqtatqts
      841 vvvksipass tgaithimqq alsshtaftk hseqlgteeg eveemdtldp qtglfyrsal
      901 tqsqaqkqqk lsqpqleqtq lqvktlqcfq tkqkqtihlq adqiqhklpq mpqlsirhqk
      961 ltplqqeqaq tkpdaqhpph hmmakerqlp tlvaqpqqtv vqvlavkttq qlpklqqapt
     1021 aqkiyvqpqp pqsqmqlpas sekqpasqap tetsvadmlr vsmveaqida niehtivdpp
     1081 nkatstskaa seaesspctq gprvaavgmt apsipqqqth tessssppav gptlterkld
     1141 aqgipttnqf ihiqnisqkk aeessseivv qtiphypipc hsssnvvvep sgllelnnft
     1201 sqrlddeeta meqdvdsste dgtepspsqs sveqs
//
LOCUS       XP_041323193            1228 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323193
VERSION     XP_041323193.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467259.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1228
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X11"
                     /calculated_mol_wt=131558
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <352..483
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <883..>1013
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1228
                     /gene="EMSY"
                     /coded_by="XM_041467259.1:194..3880"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvki itqqvqpski lpkpvtatlp sssnspimvv ssngtimttk lvttptgtqa
      421 tytrptvsps lgarmagtpg aatyvkttsg siitvvpksl atlggkiiss nivsgtttki
      481 ttipmtskpn vivvqkttgk gttiqglpgk nvvttllnag gektiqavpa gakpaiitat
      541 rpitkmivtq pkgigstvqp atkiiptkiv ygqqgktqvl ikpkpvtfqa tvvseqtrql
      601 vtetlqqasr vaetgnsslp evkeepqtyt dssssstess qssqglcwch imyewtvfqa
      661 cqlapessvs pfctdsqpvv hviasrsqdw seheipvdtn ptiiyqdvss esqsatstik
      721 allelqqttv vkekleskpr qptidlsqma vpiqmtqekr hspespsiav veselvaeyi
      781 ttdsgrqhci gshseeylhn hivshrsqph qssqpqrtlv qhvaqsqtat qtsvvvksip
      841 asstgaithi mqqalsshta ftkhseqlgt eegeveemdt ldpqtglfyr saltqsqaqk
      901 qqklsqpqle qtqlqvktlq cfqtkqkqti hlqadqiqhk lpqmpqlsir hqkltplqqe
      961 qaqtkpdaqh pphhmmaker qlptlvaqpq qtvvqvlavk ttqqlpklqq aptaqkiyvq
     1021 pqppqsqmql passekqpas qaptetsvad mlrvsmveaq idaniehtiv dppnkatsts
     1081 kaaseaessp ctqgprvaav gmtapsipqq qthtessssp pavgptlter kldaqgiptt
     1141 nqfihiqnis qkkaeessse ivvqtiphyp ipchsssnvv vepsglleln nftsqrldde
     1201 etameqdvds stedgtepsp sqssveqs
//
LOCUS       XP_041323194            1215 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X12
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323194
VERSION     XP_041323194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1215
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X12"
                     /calculated_mol_wt=130316
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <419..521
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     CDS             1..1215
                     /gene="EMSY"
                     /coded_by="XM_041467260.1:194..3841"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke gvscsdddek prkrrrtnss ssspvllkev pkavtpvtkt
      181 itvpvsgspk msnimqsian slpphmspvk itftkpstqt tntttqkvii vttspsstfv
      241 pnilskshny aavtklvpts viasttqkqp vvitasqssv gsssscstps ctantiavta
      301 vvsstpsvvm stvaqgvsts avkvastrlp spkglvgnpt qilaqfpkqh qqspkqqlhq
      361 vqqaqqqqqp qqqqlvpcsv aqqqpqqsql pagikptiqi kqesgvkiit qqvqpskilp
      421 kpvtatlpss snspimvvss ngtimttklv ttptgtqaty trptvspslg armagtpgaa
      481 tyvkttsgsi itvvpkslat lggkiissni vsgtttkitt ipmtskpnvi vvqkttgkgt
      541 tiqglpgknv vttllnagge ktiqavpaga kpaiitatrp itkmivtqpk gigstvqpat
      601 kiiptkivyg qqgktqvlik pkpvtfqatv vseqtrqlvt etlqqasrva etgnsslpev
      661 keepqtytds sssstessqs sqdsqpvvhv iasrsqdwse heipvdtnpt iiyqdvsses
      721 qsatstikal lelqqttvke kleskprqpt idlsqmavpi qmtqekrhsp espsiavves
      781 elvaeyittv shrsqphqss qpqrtlvqhv aqsqtatqts vvvksipass tgaithimqq
      841 alsshtaftk hseqlgteeg eveemdtldp qtglfyrsal tqsqaqkqqk lsqpqleqtq
      901 lqvktlqcfq tkqkqtihlq adqiqhklpq mpqlsirhqk ltplqqeqaq tkpdaqhpph
      961 hmmakerqlp tlvaqpqqtv vqvlavkttq qlpklqqapt aqkiyvqpqp pqsqmqlpas
     1021 sekqpasqap tetsvadmlr vsmveaqida niehtivdpp nkatstskaa seaesspctq
     1081 gprvaavgmt apsipqqqth tessssppav gptlterkld aqgipttnqf ihiqnisqkk
     1141 aeessseivv qtiphypipc hsssnvvvep sgllelnnft sqrlddeeta meqdvdsste
     1201 dgtepspsqs sveqs
//
LOCUS       XP_041323195            1194 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X13
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323195
VERSION     XP_041323195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1194
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X13"
                     /calculated_mol_wt=128360
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <972..>1102
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1194
                     /gene="EMSY"
                     /coded_by="XM_041467261.1:197..3781"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqglcwchi myewtvfqac qlapessvsp fctdsqpvvh viasrsqdws
      781 eheipvdtnp tiiyqdvsse sqsatstika llelqqttvv kekleskprq ptidlsqmav
      841 piqmtqekrh spespsiavv eselvaeyit tdsgrqhcig shseeylhnh ivshrsqphq
      901 ssqpqrtlvq hvaqsqtatq tsvvvksipa sstgaithim qqalsshtaf tkhseqlgte
      961 egeveemdtl dpqtglfyrs altqsqaqkq qklsqpqleq tqlqvktlqc fqtkqkqtih
     1021 lqadqiqhkl pqmpqlsirh qkltplqqeq aqtkpdaqhp phhmmakerq lptlvaqpqq
     1081 tvvqvlavkt tqqlpklqqa ptaqkiyvqp qppqsqmqlp assekqpasq tiphypipch
     1141 sssnvvveps gllelnnfts qrlddeetam eqdvdssted gtepspsqss veqs
//
LOCUS       XP_041323196            1178 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X14
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323196
VERSION     XP_041323196.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467262.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1178
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X14"
                     /calculated_mol_wt=126383
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <833..>963
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1178
                     /gene="EMSY"
                     /coded_by="XM_041467262.1:194..3730"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgtqa tytrptvsps lgarmagtpg aatyvkttsg siitvvpksl atlggkiiss
      421 nivsgtttki ttipmtskpn vivvqkttgk gttiqglpgk nvvttllnag gektiqavpa
      481 gakpaiitat rpitkmivtq pkgigstvqp atkiiptkiv ygqqgktqvl ikpkpvtfqa
      541 tvvseqtrql vtetlqqasr vaetgnsslp evkeepqtyt dssssstess qssqglcwch
      601 imyewtvfqa cqlapessvs pfctdsqpvv hviasrsqdw seheipvdtn ptiiyqdvss
      661 esqsatstik allelqqttv vkekleskpr qptidlsqma vpiqmtqekr hspespsiav
      721 veselvaeyi ttdsgrqhci gshseeylhn hivshrsqph qssqpqrtlv qhvaqsqtat
      781 qtsvvvksip asstgaithi mqqalsshta ftkhseqlgt eegeveemdt ldpqtglfyr
      841 saltqsqaqk qqklsqpqle qtqlqvktlq cfqtkqkqti hlqadqiqhk lpqmpqlsir
      901 hqkltplqqe qaqtkpdaqh pphhmmaker qlptlvaqpq qtvvqvlavk ttqqlpklqq
      961 aptaqkiyvq pqppqsqmql passekqpas qaptetsvad mlrvsmveaq idaniehtiv
     1021 dppnkatsts kaaseaessp ctqgprvaav gmtapsipqq qthtessssp pavgptlter
     1081 kldaqgiptt nqfihiqnis qkkaeessse ivvqtiphyp ipchsssnvv vepsglleln
     1141 nftsqrldde etameqdvds stedgtepsp sqssveqs
//
LOCUS       XP_041323197            1143 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X15
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323197
VERSION     XP_041323197.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467263.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1143
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X15"
                     /calculated_mol_wt=122540
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <921..>1051
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1143
                     /gene="EMSY"
                     /coded_by="XM_041467263.1:194..3625"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqdsqpvvh viasrsqdws eheipvdtnp tiiyqdvsse sqsatstika
      781 llelqqttvk ekleskprqp tidlsqmavp iqmtqekrhs pespsiavve selvaeyitt
      841 vshrsqphqs sqpqrtlvqh vaqsqtatqt svvvksipas stgaithimq qalsshtaft
      901 khseqlgtee geveemdtld pqtglfyrsa ltqsqaqkqq klsqpqleqt qlqvktlqcf
      961 qtkqkqtihl qadqiqhklp qmpqlsirhq kltplqqeqa qtkpdaqhpp hhmmakerql
     1021 ptlvaqpqqt vvqvlavktt qqlpklqqap taqkiyvqpq ppqsqmqlpa ssekqpasqt
     1081 iphypipchs ssnvvvepsg llelnnftsq rlddeetame qdvdsstedg tepspsqssv
     1141 eqs
//
LOCUS       XP_041323198            1113 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X16
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323198
VERSION     XP_041323198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1113
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X16"
                     /calculated_mol_wt=119813
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <419..521
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     Region          <891..>1021
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     CDS             1..1113
                     /gene="EMSY"
                     /coded_by="XM_041467264.1:194..3535"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke gvscsdddek prkrrrtnss ssspvllkev pkavtpvtkt
      181 itvpvsgspk msnimqsian slpphmspvk itftkpstqt tntttqkvii vttspsstfv
      241 pnilskshny aavtklvpts viasttqkqp vvitasqssv gsssscstps ctantiavta
      301 vvsstpsvvm stvaqgvsts avkvastrlp spkglvgnpt qilaqfpkqh qqspkqqlhq
      361 vqqaqqqqqp qqqqlvpcsv aqqqpqqsql pagikptiqi kqesgvkiit qqvqpskilp
      421 kpvtatlpss snspimvvss ngtimttklv ttptgtqaty trptvspslg armagtpgaa
      481 tyvkttsgsi itvvpkslat lggkiissni vsgtttkitt ipmtskpnvi vvqkttgkgt
      541 tiqglpgknv vttllnagge ktiqavpaga kpaiitatrp itkmivtqpk gigstvqpat
      601 kiiptkivyg qqgktqvlik pkpvtfqatv vseqtrqlvt etlqqasrva etgnsslpev
      661 keepqtytds sssstessqs sqdsqpvvhv iasrsqdwse heipvdtnpt iiyqdvsses
      721 qsatstikal lelqqttvvk ekleskprqp tidlsqmavp iqmtqekrhs pespsiavve
      781 selvaeyitt dsgrqhcigs hseeylhnhi vshrsqphqs sqpqrtlvqh vaqsqtatqt
      841 svvvksipas stgaithimq qalsshtaft khseqlgtee geveemdtld pqtglfyrsa
      901 ltqsqaqkqq klsqpqleqt qlqvktlqcf qtkqkqtihl qadqiqhklp qmpqlsirhq
      961 kltplqqeqa qtkpdaqhpp hhmmakerql ptlvaqpqqt vvqvlavktt qqlpklqqap
     1021 taqkiyvqpq ppqsqmqlpa ssekqpasqt iphypipchs ssnvvvepsg llelnnftsq
     1081 rlddeetame qdvdsstedg tepspsqssv eqs
//
LOCUS       XP_041323199            1334 aa            linear   VRT 06-MAY-2021
DEFINITION  BRCA2-interacting transcriptional repressor EMSY isoform X17
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323199
VERSION     XP_041323199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467265.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1334
                     /product="BRCA2-interacting transcriptional repressor EMSY
                     isoform X17"
                     /calculated_mol_wt=142823
     Region          17..86
                     /region_name="ENT"
                     /note="ENT domain; pfam03735"
                     /db_xref="CDD:461032"
     Region          <470..572
                     /region_name="COG3889"
                     /note="Extracellular solute-binding protein, contains
                     Ig-fold domain [General function prediction only]"
                     /db_xref="CDD:443097"
     CDS             1..1334
                     /gene="EMSY"
                     /coded_by="XM_041467265.1:194..4198"
                     /db_xref="GeneID:121353421"
ORIGIN      
        1 mpvvwptlld lsrdeckril rkleleayag visalraqgd ltkekkdllg elskvlsist
       61 erhraevrra vnderlttia hnmsgpnsss ewsiegrrlv plmprlvpqt aftvtanava
      121 naaiqhnasl pvpaetgnke vvvcysytst tstptstpvp sgsvatvksp rpaspasnvv
      181 vlpsgstvyv ksvscsddde kprkrrrtns sssspvllke vpkavtpvtk titvpvsgsp
      241 kmsnimqsia nslpphmspv kitftkpstq ttntttqkvi ivttspsstf vpnilskshn
      301 yaavtklvpt sviasttqkq pvvitasqss vgsssscstp sctantiavt avvsstpsvv
      361 mstvaqgvst savkvastrl pspkglvgnp tqilaqfpkq hqqspkqqlh qvqqaqqqqq
      421 pqqqqlvpcs vaqqqpqqsq lpagikptiq ikqesgvkii tqqvqpskil pkpvtatlps
      481 ssnspimvvs sngtimttkl vttptgtqat ytrptvspsl garmagtpga atyvkttsgs
      541 iitvvpksla tlggkiissn ivsgtttkit tipmtskpnv ivvqkttgkg ttiqglpgkn
      601 vvttllnagg ektiqavpag akpaiitatr pitkmivtqp kgigstvqpa tkiiptkivy
      661 gqqgktqvli kpkpvtfqat vvseqtrqlv tetlqqasrv aetgnsslpe vkeepqtytd
      721 ssssstessq ssqdsqpvvh viasrsqdws eheipvdtnp tiiyqdvsse sqsatstika
      781 llelqqttvk ekleskprqp tidlsqmavp iqmtqekrhs pespsiavve selvaeyitt
      841 dsgrqhcigs hseeylhnhi vshrsqphqs sqpqrtlvqh vaqsqtatqt svvvksipas
      901 stgaithimq qalsshtaft khseqlgtee geveemdtld pqtglfyrsa ltqsqaqkqq
      961 klsqpqleqt qlqvktlqcf qtkqkqtihl qadqiqhklp qmpqlsirhq kltplqqeqa
     1021 qtkpdaqhpp hhmmakerql ptlvaqpqqt vvqvlavktt qqlpklqqap taqkiyvqpq
     1081 ppqsqmqlpa ssekqpasqv qhltvmqgst vteitfeghe ppfvskvagg ssvpklallv
     1141 tslfpmqapt etsvadmlrv smveaqidan iehtivdppn katstskaas eaesspctqg
     1201 prvaavgmta psipqqqtht essssppavg ptlterklda qgipttnqfi hiqnisqkka
     1261 eessseivvq tiphypipch sssnvvveps gllelnnfts qrlddeetam eqdvdssted
     1321 gtepspsqss veqs
//
LOCUS       XP_041323201             750 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta precursor protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323201
VERSION     XP_041323201.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467267.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..750
                     /product="amyloid-beta precursor protein isoform X1"
                     /calculated_mol_wt=84269
     Region          24..188
                     /region_name="A4_EXTRA"
                     /note="amyloid A4; smart00006"
                     /db_xref="CDD:128326"
     Region          293..340
                     /region_name="Kunitz_ABPP-like"
                     /note="Kunitz domain found in the amyloid-beta precursor
                     protein (ABPP) subfamily; cd22607"
                     /db_xref="CDD:438650"
     Site            order(296..304,319,321,323)
                     /site_type="other"
                     /note="serine protease binding site [polypeptide binding]"
                     /db_xref="CDD:438650"
     Region          346..528
                     /region_name="APP_E2"
                     /note="E2 domain of amyloid precursor protein; pfam12925"
                     /db_xref="CDD:463752"
     Region          673..747
                     /region_name="JMTM_Notch_APP"
                     /note="juxtamembrane and transmembrane (JMTM) domain found
                     in Notch and APP family proteins; cl41775"
                     /db_xref="CDD:425406"
     Site            order(686..687,689..690,692..698,700..705)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411983"
     CDS             1..750
                     /gene="LOC121353422"
                     /coded_by="XM_041467267.1:189..2441"
                     /db_xref="GeneID:121353422"
ORIGIN      
        1 mlpylavlll aagaagalev padgnaglla epqiamfcgk lnmhmnvqng kwesdpsgtk
       61 tcigtkegil qycqevypel qitnvveanq pvtiqnwckr gwkqcnghph ivvpyrclvg
      121 efvsdallvp dkckflhqer mdvcethlhw htvakescse ksmnlhdygm llpcgidkfr
      181 gvefvccpla eesenldsad aedddsdvww ggadadyadg sddkaveeqa eedeeltvve
      241 dedadddddd gdeieetgee yeeatertts iattttttte sveevvrevc seqaetgpcr
      301 amisrwyfdm aegkcapffy ggcggnrnnf dseeycmavc gsiipttaas tpdavdkyle
      361 tpgdenehah fqkakerlea khrermsqvm reweeaerqa kslpkadkka viqhfqekve
      421 sleqeaaner qqlvethmar veamlndrrr ialenyital qtvpprprhv fnmlkkyvra
      481 eqkdrqhtlk hfehvrmvdp kkaaqirsqv mthlrviyer mnqslsflyn vpavaeeiqd
      541 evdellqkeq nysddvlanm iseprisygn dalmpsltet kttvellpvd gdfnlddlqp
      601 whpfgvdsvp antenevepv darpaadrgl ttrpgsgltn vkteeisevk mdaefrhdsg
      661 yevhhqklvf faedvgsnkg aviglmvggv viatvivitl vmlkkkqyts ihhgvvevda
      721 avtpeerhls kmqqngyenp tykffeqmqn
//
LOCUS       XP_041323202             732 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta precursor protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323202
VERSION     XP_041323202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467268.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="amyloid-beta precursor protein isoform X2"
                     /calculated_mol_wt=82365
     Region          24..188
                     /region_name="A4_EXTRA"
                     /note="amyloid A4; smart00006"
                     /db_xref="CDD:128326"
     Region          293..340
                     /region_name="Kunitz_ABPP-like"
                     /note="Kunitz domain found in the amyloid-beta precursor
                     protein (ABPP) subfamily; cd22607"
                     /db_xref="CDD:438650"
     Site            order(296..304,319,321,323)
                     /site_type="other"
                     /note="serine protease binding site [polypeptide binding]"
                     /db_xref="CDD:438650"
     Region          346..528
                     /region_name="APP_E2"
                     /note="E2 domain of amyloid precursor protein; pfam12925"
                     /db_xref="CDD:463752"
     Region          655..729
                     /region_name="JMTM_Notch_APP"
                     /note="juxtamembrane and transmembrane (JMTM) domain found
                     in Notch and APP family proteins; cl41775"
                     /db_xref="CDD:425406"
     Site            order(668..669,671..672,674..680,682..687)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411983"
     CDS             1..732
                     /gene="LOC121353422"
                     /coded_by="XM_041467268.1:189..2387"
                     /db_xref="GeneID:121353422"
ORIGIN      
        1 mlpylavlll aagaagalev padgnaglla epqiamfcgk lnmhmnvqng kwesdpsgtk
       61 tcigtkegil qycqevypel qitnvveanq pvtiqnwckr gwkqcnghph ivvpyrclvg
      121 efvsdallvp dkckflhqer mdvcethlhw htvakescse ksmnlhdygm llpcgidkfr
      181 gvefvccpla eesenldsad aedddsdvww ggadadyadg sddkaveeqa eedeeltvve
      241 dedadddddd gdeieetgee yeeatertts iattttttte sveevvrevc seqaetgpcr
      301 amisrwyfdm aegkcapffy ggcggnrnnf dseeycmavc gsiipttaas tpdavdkyle
      361 tpgdenehah fqkakerlea khrermsqvm reweeaerqa kslpkadkka viqhfqekve
      421 sleqeaaner qqlvethmar veamlndrrr ialenyital qtvpprprhv fnmlkkyvra
      481 eqkdrqhtlk hfehvrmvdp kkaaqirsqv mthlrviyer mnqslsflyn vpavaeeiqd
      541 evdellqkeq nysddvlanm iseprisygn dalmpsltet kttvellpvd gdfnlddlqp
      601 whpfgvdsvp antenegsgl tnvkteeise vkmdaefrhd sgyevhhqkl vffaedvgsn
      661 kgaviglmvg gvviatvivi tlvmlkkkqy tsihhgvvev daavtpeerh lskmqqngye
      721 nptykffeqm qn
//
LOCUS       XP_041323203             694 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta precursor protein isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323203
VERSION     XP_041323203.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467269.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="amyloid-beta precursor protein isoform X3"
                     /calculated_mol_wt=78083
     Region          24..188
                     /region_name="A4_EXTRA"
                     /note="amyloid A4; smart00006"
                     /db_xref="CDD:128326"
     Region          290..472
                     /region_name="APP_E2"
                     /note="E2 domain of amyloid precursor protein; pfam12925"
                     /db_xref="CDD:463752"
     Region          617..691
                     /region_name="JMTM_Notch_APP"
                     /note="juxtamembrane and transmembrane (JMTM) domain found
                     in Notch and APP family proteins; cl41775"
                     /db_xref="CDD:425406"
     Site            order(630..631,633..634,636..642,644..649)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411983"
     CDS             1..694
                     /gene="LOC121353422"
                     /coded_by="XM_041467269.1:189..2273"
                     /db_xref="GeneID:121353422"
ORIGIN      
        1 mlpylavlll aagaagalev padgnaglla epqiamfcgk lnmhmnvqng kwesdpsgtk
       61 tcigtkegil qycqevypel qitnvveanq pvtiqnwckr gwkqcnghph ivvpyrclvg
      121 efvsdallvp dkckflhqer mdvcethlhw htvakescse ksmnlhdygm llpcgidkfr
      181 gvefvccpla eesenldsad aedddsdvww ggadadyadg sddkaveeqa eedeeltvve
      241 dedadddddd gdeieetgee yeeatertts iattttttte sveevvrvpt taastpdavd
      301 kyletpgden ehahfqkake rleakhrerm sqvmreweea erqakslpka dkkaviqhfq
      361 ekvesleqea anerqqlvet hmarveamln drrrialeny italqtvppr prhvfnmlkk
      421 yvraeqkdrq htlkhfehvr mvdpkkaaqi rsqvmthlrv iyermnqsls flynvpavae
      481 eiqdevdell qkeqnysddv lanmisepri sygndalmps ltetkttvel lpvdgdfnld
      541 dlqpwhpfgv dsvpantene vepvdarpaa drglttrpgs gltnvkteei sevkmdaefr
      601 hdsgyevhhq klvffaedvg snkgaviglm vggvviatvi vitlvmlkkk qytsihhgvv
      661 evdaavtpee rhlskmqqng yenptykffe qmqn
//
LOCUS       XP_041323204             676 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta precursor protein isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323204
VERSION     XP_041323204.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467270.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..676
                     /product="amyloid-beta precursor protein isoform X4"
                     /calculated_mol_wt=76179
     Region          24..188
                     /region_name="A4_EXTRA"
                     /note="amyloid A4; smart00006"
                     /db_xref="CDD:128326"
     Region          290..472
                     /region_name="APP_E2"
                     /note="E2 domain of amyloid precursor protein; pfam12925"
                     /db_xref="CDD:463752"
     Region          599..673
                     /region_name="JMTM_Notch_APP"
                     /note="juxtamembrane and transmembrane (JMTM) domain found
                     in Notch and APP family proteins; cl41775"
                     /db_xref="CDD:425406"
     Site            order(612..613,615..616,618..624,626..631)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:411983"
     CDS             1..676
                     /gene="LOC121353422"
                     /coded_by="XM_041467270.1:189..2219"
                     /db_xref="GeneID:121353422"
ORIGIN      
        1 mlpylavlll aagaagalev padgnaglla epqiamfcgk lnmhmnvqng kwesdpsgtk
       61 tcigtkegil qycqevypel qitnvveanq pvtiqnwckr gwkqcnghph ivvpyrclvg
      121 efvsdallvp dkckflhqer mdvcethlhw htvakescse ksmnlhdygm llpcgidkfr
      181 gvefvccpla eesenldsad aedddsdvww ggadadyadg sddkaveeqa eedeeltvve
      241 dedadddddd gdeieetgee yeeatertts iattttttte sveevvrvpt taastpdavd
      301 kyletpgden ehahfqkake rleakhrerm sqvmreweea erqakslpka dkkaviqhfq
      361 ekvesleqea anerqqlvet hmarveamln drrrialeny italqtvppr prhvfnmlkk
      421 yvraeqkdrq htlkhfehvr mvdpkkaaqi rsqvmthlrv iyermnqsls flynvpavae
      481 eiqdevdell qkeqnysddv lanmisepri sygndalmps ltetkttvel lpvdgdfnld
      541 dlqpwhpfgv dsvpantene gsgltnvkte eisevkmdae frhdsgyevh hqklvffaed
      601 vgsnkgavig lmvggvviat vivitlvmlk kkqytsihhg vvevdaavtp eerhlskmqq
      661 ngyenptykf feqmqn
//
LOCUS       XP_041323205             472 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein alpha chain isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323205
VERSION     XP_041323205.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467271.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="GA-binding protein alpha chain isoform X1"
                     /calculated_mol_wt=52880
     Region          40..119
                     /region_name="GABP-alpha"
                     /note="GA-binding protein alpha chain; pfam11620"
                     /db_xref="CDD:463311"
     Region          168..254
                     /region_name="SAM_PNT-GABP-alpha"
                     /note="Sterile alpha motif (SAM)/Pointed domain of
                     GA-binding protein (GABP) alpha chain; cd08534"
                     /db_xref="CDD:176084"
     Region          320..421
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..472
                     /gene="GABPA"
                     /coded_by="XM_041467271.1:164..1582"
                     /db_xref="GeneID:121353423"
ORIGIN      
        1 mtkreaeeli eieidgtekq ecteesiveq syttaefvsq aidisepign lkklleprlq
       61 csldaheicl qdiqldpdrs lfdqgvktdg tvqlsvqvis rqgmepklni leivkpvetv
      121 evvidpdahh aeaeahlvee aqvitldgak hiatisdets eqvtrwaaal egyrkeqerl
      181 gipydpvqws tdqvlhwvvw vmkefsmtdi dlnalsipgr dlcnlsqedf fqrvprgeil
      241 wshlellrky vlasqehsge iatvtidqpv qiipasvqpa tpttikvins sakaakvqra
      301 prisgedrss pgnrtgnngq iqlwqfllel ltdkdardci swvgdegefk lnqpelvaqk
      361 wgqrknkptm nyeklsrals lsllclwscc lgpdpqkyyy dgdmickvqg krfvykfvcd
      421 lktligysaa elnrlvtece qkklakmqlh giaqpvtava lataslqaek dn
//
LOCUS       XP_041323206             455 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein alpha chain isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323206
VERSION     XP_041323206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467272.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="GA-binding protein alpha chain isoform X2"
                     /calculated_mol_wt=51091
     Region          40..119
                     /region_name="GABP-alpha"
                     /note="GA-binding protein alpha chain; pfam11620"
                     /db_xref="CDD:463311"
     Region          168..254
                     /region_name="SAM_PNT-GABP-alpha"
                     /note="Sterile alpha motif (SAM)/Pointed domain of
                     GA-binding protein (GABP) alpha chain; cd08534"
                     /db_xref="CDD:176084"
     Region          320..404
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..455
                     /gene="GABPA"
                     /coded_by="XM_041467272.1:164..1531"
                     /db_xref="GeneID:121353423"
ORIGIN      
        1 mtkreaeeli eieidgtekq ecteesiveq syttaefvsq aidisepign lkklleprlq
       61 csldaheicl qdiqldpdrs lfdqgvktdg tvqlsvqvis rqgmepklni leivkpvetv
      121 evvidpdahh aeaeahlvee aqvitldgak hiatisdets eqvtrwaaal egyrkeqerl
      181 gipydpvqws tdqvlhwvvw vmkefsmtdi dlnalsipgr dlcnlsqedf fqrvprgeil
      241 wshlellrky vlasqehsge iatvtidqpv qiipasvqpa tpttikvins sakaakvqra
      301 prisgedrss pgnrtgnngq iqlwqfllel ltdkdardci swvgdegefk lnqpelvaqk
      361 wgqrknkptm nyeklsralr yyydgdmick vqgkrfvykf vcdlktligy saaelnrlvt
      421 eceqkklakm qlhgiaqpvt avalataslq aekdn
//
LOCUS       XP_041323207             403 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein alpha chain isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323207
VERSION     XP_041323207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467273.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="GA-binding protein alpha chain isoform X3"
                     /calculated_mol_wt=45436
     Region          40..119
                     /region_name="GABP-alpha"
                     /note="GA-binding protein alpha chain; pfam11620"
                     /db_xref="CDD:463311"
     Region          168..254
                     /region_name="SAM_PNT-GABP-alpha"
                     /note="Sterile alpha motif (SAM)/Pointed domain of
                     GA-binding protein (GABP) alpha chain; cd08534"
                     /db_xref="CDD:176084"
     Region          320..>380
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..403
                     /gene="GABPA"
                     /coded_by="XM_041467273.1:164..1375"
                     /db_xref="GeneID:121353423"
ORIGIN      
        1 mtkreaeeli eieidgtekq ecteesiveq syttaefvsq aidisepign lkklleprlq
       61 csldaheicl qdiqldpdrs lfdqgvktdg tvqlsvqvis rqgmepklni leivkpvetv
      121 evvidpdahh aeaeahlvee aqvitldgak hiatisdets eqvtrwaaal egyrkeqerl
      181 gipydpvqws tdqvlhwvvw vmkefsmtdi dlnalsipgr dlcnlsqedf fqrvprgeil
      241 wshlellrky vlasqehsge iatvtidqpv qiipasvqpa tpttikvins sakaakvqra
      301 prisgedrss pgnrtgnngq iqlwqfllel ltdkdardci swvgdegefk lnqpelvaqk
      361 wgqrknkptm nyeklsralr iinlgcslpe iylvfvyhqy lcf
//
LOCUS       XP_041323208             369 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein alpha chain isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323208
VERSION     XP_041323208.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467274.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="GA-binding protein alpha chain isoform X4"
                     /calculated_mol_wt=41332
     Region          65..151
                     /region_name="SAM_PNT-GABP-alpha"
                     /note="Sterile alpha motif (SAM)/Pointed domain of
                     GA-binding protein (GABP) alpha chain; cd08534"
                     /db_xref="CDD:176084"
     Region          217..318
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..369
                     /gene="GABPA"
                     /coded_by="XM_041467274.1:595..1704"
                     /db_xref="GeneID:121353423"
ORIGIN      
        1 mepklnilei vkpvetvevv idpdahhaea eahlveeaqv itldgakhia tisdetseqv
       61 trwaaalegy rkeqerlgip ydpvqwstdq vlhwvvwvmk efsmtdidln alsipgrdlc
      121 nlsqedffqr vprgeilwsh lellrkyvla sqehsgeiat vtidqpvqii pasvqpatpt
      181 tikvinssak aakvqrapri sgedrsspgn rtgnngqiql wqfllelltd kdardciswv
      241 gdegefklnq pelvaqkwgq rknkptmnye klsralslsl lclwscclgp dpqkyyydgd
      301 mickvqgkrf vykfvcdlkt ligysaaeln rlvteceqkk lakmqlhgia qpvtavalat
      361 aslqaekdn
//
LOCUS       XP_041323210             254 aa            linear   VRT 06-MAY-2021
DEFINITION  junctional adhesion molecule B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323210
VERSION     XP_041323210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="junctional adhesion molecule B isoform X1"
                     /calculated_mol_wt=27817
     Region          <2..76
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          4..8
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          37..41
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          51..56
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          68..71
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          82..179
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          96..100
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          110..114
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          143..147
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          157..162
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          172..175
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..254
                     /gene="JAM2"
                     /coded_by="XM_041467276.1:250..1014"
                     /db_xref="GeneID:121353424"
ORIGIN      
        1 mslriewkki qsqgvsfvyy nseftgdlrg raemlntgir irnvtrrdsg tyrceisaks
       61 eegqrlgeat itltvlvapt tpvcevpssa mtgtvvqmsc kenegsppse yqwykngval
      121 lektgtgsar aanitytmnk ksgtllfntv tkndtgeyfc easngiglsq kcsvkrmqvd
      181 dlnvsgiiva vvlvalvivl cglgvfyaqk kgyfakesss qkkmnyqsts ekarllcslv
      241 cfkcfkylqs sldl
//
LOCUS       XP_041323211             242 aa            linear   VRT 06-MAY-2021
DEFINITION  junctional adhesion molecule B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323211
VERSION     XP_041323211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467277.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="junctional adhesion molecule B isoform X2"
                     /calculated_mol_wt=26487
     Region          <2..76
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          4..8
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          37..41
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          51..56
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          68..71
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          82..179
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          96..100
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          110..114
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          143..147
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          157..162
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          172..175
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..242
                     /gene="JAM2"
                     /coded_by="XM_041467277.1:250..978"
                     /db_xref="GeneID:121353424"
ORIGIN      
        1 mslriewkki qsqgvsfvyy nseftgdlrg raemlntgir irnvtrrdsg tyrceisaks
       61 eegqrlgeat itltvlvapt tpvcevpssa mtgtvvqmsc kenegsppse yqwykngval
      121 lektgtgsar aanitytmnk ksgtllfntv tkndtgeyfc easngiglsq kcsvkrmqvd
      181 dlnvsgiiva vvlvalvivl cglgvfyaqk kgyfakesss qkkmnyqsts ekdfkhtksf
      241 vi
//
LOCUS       XP_041323212             107 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP synthase-coupling factor 6, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323212
VERSION     XP_041323212.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467278.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..107
                     /product="ATP synthase-coupling factor 6, mitochondrial"
                     /calculated_mol_wt=12163
     Region          1..98
                     /region_name="ATP-synt_F6"
                     /note="Mitochondrial ATP synthase coupling factor 6;
                     pfam05511"
                     /db_xref="CDD:461669"
     CDS             1..107
                     /gene="ATP5PF"
                     /coded_by="XM_041467278.1:163..486"
                     /db_xref="GeneID:121353426"
ORIGIN      
        1 milrqilrls slfhsavsih lrrniglsai vfnkakeldp vqklfldkir eyntkskqag
       61 gpvdagpefq kdmneslarl qraygegdlt kfpefkfeep kfeetpk
//
LOCUS       XP_041323213             107 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP synthase-coupling factor 6, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323213
VERSION     XP_041323213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..107
                     /product="ATP synthase-coupling factor 6, mitochondrial"
                     /calculated_mol_wt=12163
     Region          1..98
                     /region_name="ATP-synt_F6"
                     /note="Mitochondrial ATP synthase coupling factor 6;
                     pfam05511"
                     /db_xref="CDD:461669"
     CDS             1..107
                     /gene="ATP5PF"
                     /coded_by="XM_041467279.1:111..434"
                     /db_xref="GeneID:121353426"
ORIGIN      
        1 milrqilrls slfhsavsih lrrniglsai vfnkakeldp vqklfldkir eyntkskqag
       61 gpvdagpefq kdmneslarl qraygegdlt kfpefkfeep kfeetpk
//
LOCUS       XP_041323214             107 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP synthase-coupling factor 6, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323214
VERSION     XP_041323214.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467280.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..107
                     /product="ATP synthase-coupling factor 6, mitochondrial"
                     /calculated_mol_wt=12163
     Region          1..98
                     /region_name="ATP-synt_F6"
                     /note="Mitochondrial ATP synthase coupling factor 6;
                     pfam05511"
                     /db_xref="CDD:461669"
     CDS             1..107
                     /gene="ATP5PF"
                     /coded_by="XM_041467280.1:158..481"
                     /db_xref="GeneID:121353426"
ORIGIN      
        1 milrqilrls slfhsavsih lrrniglsai vfnkakeldp vqklfldkir eyntkskqag
       61 gpvdagpefq kdmneslarl qraygegdlt kfpefkfeep kfeetpk
//
LOCUS       XP_041323216             766 aa            linear   VRT 06-MAY-2021
DEFINITION  52 kDa repressor of the inhibitor of the protein kinase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323216
VERSION     XP_041323216.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467282.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..766
                     /product="52 kDa repressor of the inhibitor of the protein
                     kinase"
                     /calculated_mol_wt=87781
     Region          5..86
                     /region_name="THAP"
                     /note="THAP domain; pfam05485"
                     /db_xref="CDD:461662"
     Region          <158..331
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     CDS             1..766
                     /gene="THAP12"
                     /coded_by="XM_041467282.1:47..2347"
                     /db_xref="GeneID:121353427"
ORIGIN      
        1 mpnfcaapnc trkstqsdla ffrfprdpar cqrwvencrr adledktpdq lnkhyrlcak
       61 hfetsmicrs spyrtvlrdn avptifdlts hlnnphsrhr krikelsede irtlkqqkid
      121 dafeqkqatp esnenneqnt vsvegeeeqe ekavpltlee renkdylksl feililmgkq
      181 nipldghnvd elpegiftsd nfqalleyri nggdevlrkr femtavnley csktqqkqml
      241 eicencvree tlrevrdshf fsivtdevvd iageehlpvl vrfvddshnl reefigflpy
      301 eadpeilavk fhatitekwg lnmeycrgqa yivssgfask mkvvatrlle kypqavytlc
      361 sscalnvwla ksvpvvgvsi algtieevcc lfnqspqllv eldntisalf qdndekgnel
      421 kkicrshwtg rhdtfevlvd llqalvlcld avssdfsvrw nnfivgrafv lssaltdfdf
      481 ivtivimknv lsftrafgkn lqgqtsdvff aagsltavlh slnevmenie vyhefwfeea
      541 tnlatkldvq iklpgkflra qqgnfdpdmt senyykeils vptiehiiqe lkdifseqhl
      601 kalkclslvp svmgqlkfnt seehhadmfk ndlpnpdtls aelhcwrikw khrgkdielp
      661 atiyealhlp dikffpnvya llkvlcllpv mkvenekygi grkrlkaylk ntltgqrssn
      721 lallninldi khdldlmvdt yiklypdkve fqdctpsnns evtdda
//
LOCUS       XP_041323217             217 aa            linear   VRT 06-MAY-2021
DEFINITION  somatotropin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323217
VERSION     XP_041323217.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467283.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="somatotropin-like"
                     /calculated_mol_wt=24835
     Region          36..215
                     /region_name="somatotropin_like"
                     /note="Somatotropin or growth hormone (GH), placental
                     lactogen, and related pituitary gland hormones; cd10285"
                     /db_xref="CDD:198435"
     Site            order(36,39,42..43,45,48..49,52,68..69,72..73,75,87..90,
                     93..94,141,144..145,148,189,192..193,196..197,199..200,
                     203..204,207,215)
                     /site_type="other"
                     /note="receptor binding interface [polypeptide binding]"
                     /db_xref="CDD:198435"
     CDS             1..217
                     /gene="LOC121353429"
                     /coded_by="XM_041467283.1:60..713"
                     /db_xref="GeneID:121353429"
ORIGIN      
        1 mapgswfspl tiamitlglq wpqqaaafpt iplstlfana vlraqhlhll aaetykefer
       61 tyipedqrht nknsqvsfcy setipapvkk ddaqqksdie llqfslvliq swltpvqyls
      121 kmftnnlvfg tsdrvyeklk dleegiqalm relqdrsprg pqilkatyek fdihlrseda
      181 llqnygllsc fkkdlhkvet ylkvmkcrry gegncti
//
LOCUS       XP_041323218             687 aa            linear   VRT 06-MAY-2021
DEFINITION  UV radiation resistance-associated gene protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323218
VERSION     XP_041323218.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467284.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="UV radiation resistance-associated gene protein"
                     /calculated_mol_wt=77370
     Region          32..>106
                     /region_name="C2"
                     /note="C2 domain; cd00030"
                     /db_xref="CDD:175973"
     Region          172..437
                     /region_name="ATG14"
                     /note="Vacuolar sorting 38 and autophagy-related subunit
                     14; pfam10186"
                     /db_xref="CDD:462986"
     CDS             1..687
                     /gene="UVRAG"
                     /coded_by="XM_041467284.1:264..2327"
                     /db_xref="GeneID:121353430"
ORIGIN      
        1 mtsaagpaal ppgsaaralh velpsqqrrl rhlrniaarn iinknghrll dtyftlhmcd
       61 nakiykefyk seviknslnp twrsldfgim pdhldtsvsc fvvriwggkk ehfqlliewk
      121 vnldglkylg qqiharnpne iifglndgyy gasfeqkdhs gtlknsllqv dqncvrnsyd
      181 vfsllrlhra qcaikqtqvt vqkigreiee klrctstrne lkkeseclql kilvlrnele
      241 rqkkalgqev allhkqkstl ldrenafgte yqkleehnes lhesrkecta kreqflkina
      301 qqtirckqll selsyiypid lnnqkdyfvc gvklpnsedf qakddgsiav algytahlis
      361 misfflqvpl rypiihkgsr stikdnindk ltekerefpl yakggeklqf eygvyllnkn
      421 iaqlryqhgl stpdlrqtlp nlknfmelgl mvrcdrhhts saipvpkrqs ssfgrldigf
      481 ssglpspdkg lrkrastgse rlqyktppps ynsaltqpva vtacvgelde kpgpicssld
      541 tsmdspkrnt kkgqdlcssl ngengslnnt qdrqesflgr ssaingallp gkcsgtmnne
      601 qpcafqpsln pvlcctveqa eeimgmeatg fstgdqledf tsipvehava vecdeqvlge
      661 feefsrrica lnenmssfrr prkssdk
//
LOCUS       XP_041323219             401 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323219
VERSION     XP_041323219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467285.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="microtubule-associated protein 6"
                     /calculated_mol_wt=44354
     Region          <161..390
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..401
                     /gene="MAP6"
                     /coded_by="XM_041467285.1:27..1232"
                     /db_xref="GeneID:121353431"
ORIGIN      
        1 mawpcitrac ciarfwnqld kadiavplvf tkyteatehp aapappprpa apietqpgge
       61 vaagagggep tpgparpgpa phasppadsv mrhdykpwkv qrpepsckpk seyqpsdtpf
      121 eketqyqkdf rawpipkrgd hpwipkpgps pvlaldrapp ekpaqekrrk vhlppekkee
      181 hpevedehpk tvrpgdgrek grkkaeeagg qpaepsrgra aadavnrqik eevaagvsss
      241 yrnefrpwid vkpvkaikak pqykppeekm thetsysaqf kgetskpspa dnkylerrri
      301 rtlycepyke ppkvekpstk pskpkkttts hkslkkakdk qiasgraakk ksaetsntak
      361 pedtekskem nnklaeaket seknigatdq epstlvkdef t
//
LOCUS       XP_041323220             335 aa            linear   VRT 06-MAY-2021
DEFINITION  2-acylglycerol O-acyltransferase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323220
VERSION     XP_041323220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..335
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..335
                     /product="2-acylglycerol O-acyltransferase 2"
                     /calculated_mol_wt=38183
     Region          42..334
                     /region_name="LPLAT"
                     /note="Lysophospholipid acyltransferases (LPLATs) of
                     glycerophospholipid biosynthesis; cl17185"
                     /db_xref="CDD:473073"
     Site            order(111,114,116,137..140,188..190)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153249"
     CDS             1..335
                     /gene="MOGAT2"
                     /coded_by="XM_041467286.1:1..1008"
                     /db_xref="GeneID:121353432"
ORIGIN      
        1 mkvefaplsv plqrrlqtas vvqwvfsflg laqcctaafi alfftrfwlv salyaawwli
       61 drekpkkggr ripvfrncvv wrymrdyfpv tlvktaeldp rqnyvvgfhp hgvlatgafi
      121 nfcteasgfs ilfpgitphl mmlslwfrfp ffrdyvmsgg lipsdkesas yvlqkpeggn
      181 llviivggaq ealdarpgsy tlllknrkgf vrlaiqhgtp lvpafsfgen dvfdqvknpk
      241 gswlrriqhc lqqimgislp lfhargifqy sfgvipyrrp ictvvgkpip vqkkhrpsee
      301 evdevhqkyl nelselfekh kakynvpeds hlefi
//
LOCUS       XP_041323221             354 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Wnt-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041323221
VERSION     XP_041323221.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467287.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..354
                     /product="protein Wnt-11"
                     /calculated_mol_wt=39437
     Region          51..354
                     /region_name="Wnt_Wnt11"
                     /note="Wnt domain found in protein Wnt-11 and similar
                     proteins; cd19343"
                     /db_xref="CDD:381717"
     Site            order(210..211,214..216,224,333,335,337,339)
                     /site_type="other"
                     /note="Frizzled receptor binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381717"
     CDS             1..354
                     /gene="WNT11"
                     /coded_by="XM_041467287.1:1..1065"
                     /db_xref="GeneID:121353433"
ORIGIN      
        1 mrpsprffla gflllilqtg lcygikwial sktsfalaln qtqhckqleg lvvsqvqlcr
       61 snlelmqtii qaareviktc rktfsdmrwn cssielapny lldldrgtre safvyalsaa
      121 aishtiarac ttgdlpgcsc gpipgetpgp gyrwggcadn lnyglimgsk fsdapmkmkk
      181 sgsqanklmh lhnsevgrqv lkaslemkck chgvsgscsi ktcwkglqel rdialdlktk
      241 ylsatkvvhr pmgtrkylvp kdidirpvke teliylqssp dfcmknekvg shgtqdrqcn
      301 ktsngsdscd lmccgrgynp ymdkvverch ckyhwccyvt ckkcersver yvck
//
LOCUS       XP_041323223             358 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol O-acyltransferase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323223
VERSION     XP_041323223.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467289.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519652.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="diacylglycerol O-acyltransferase 2"
                     /calculated_mol_wt=40206
     Region          62..358
                     /region_name="DAGAT"
                     /note="Diacylglycerol acyltransferase; pfam03982"
                     /db_xref="CDD:112781"
     Site            order(133,136,159..162,210..212)
                     /site_type="active"
                     /note="putative acyl-acceptor binding pocket [active]"
                     /db_xref="CDD:153249"
     CDS             1..358
                     /gene="DGAT2"
                     /coded_by="XM_041467289.1:96..1172"
                     /db_xref="GeneID:121353434"
ORIGIN      
        1 mktiiaaysg vlrgtgsnil salqdllwll kskvekqlqi isvlqwvltf lvmgvactli
       61 lmyilctdcw aiaalylawl vfdwntpkkg grrsqwvrnw aiwryfrdyf pirlvkthnl
      121 lttrnyifgy hphgimglga fcnfsteatg vgqkfpgirp ylatlagnfr mpilrdylms
      181 ggicpvnrds idyilskngs gnaiiivvgg aaeslnctpg knsvtlknrk gfvklalrhg
      241 adlvpiysfg enevykqvif eegswgrwvq kkfqkhigfa pcifhgrglf ssntwgllpy
      301 skpittvvge pitipkignp sqkdvdfyhs iyvdsliklf dkykskfglp etevlevn
//
LOCUS       XP_041323224              82 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger SWIM domain-containing protein 5-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323224
VERSION     XP_041323224.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467290.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519654.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>82
                     /product="zinc finger SWIM domain-containing protein
                     5-like"
     CDS             1..82
                     /gene="LOC121353438"
                     /coded_by="XM_041467290.1:<1..>246"
                     /db_xref="GeneID:121353438"
ORIGIN      
        1 gggtgsllqp eslldaaakr vagswaferv egrfqripep vqrrivywsf prserqicmy
       61 ssfqpgraaa aaspasaaag gp
//
LOCUS       XP_041323225              81 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 865-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323225
VERSION     XP_041323225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519674.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>81
                     /product="zinc finger protein 865-like"
     Region          14..34
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          42..62
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..81
                     /gene="LOC121353439"
                     /coded_by="XM_041467291.1:<1..>242"
                     /db_xref="GeneID:121353439"
ORIGIN      
        1 hqrrhrgkar prrcrtcget frfrgnlleh rrrhlgervy rcercgksff ylgsiarhlr
       61 gherrarcpr crrsfarpaa l
//
LOCUS       XP_041323226            1084 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323226
VERSION     XP_041323226.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467292.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1084
                     /product="formin-like protein 2 isoform X1"
                     /calculated_mol_wt=122839
     Region          23..275
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          278..475
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          609..960
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1084
                     /gene="FMNL2"
                     /coded_by="XM_041467292.1:126..3380"
                     /db_xref="GeneID:121353440"
ORIGIN      
        1 mgnagsvdaq qtelrahsvp lklpmpepge leerfavvln amnlppdkar llrqydnekk
       61 welicdqerf qvknpphtyi qklkgyldpa vtrkkfrrrv qestqvlrel eislrtnhig
      121 wvreflneen kgldvlveyl sfaqyavtfd feslensves smdkskpwsr siedlhrgsn
      181 lpspvgnsis rsgrhstlry ntlpsrrtlk nsrlvskkdd vhvcimclra imnyqygfnm
      241 vmshphavne ialslnnknp rtkalvlell aavclvrggh eiilsafdnf kevcgekqrf
      301 eklmehfrne dnnidfmvac mqfinivvhs vedmnfrvhl qyeftklgld eyldklkhte
      361 sdklqvqiqa yldnvfdvga lledaetkna alerveelee nlshlseklq dteneamaki
      421 velekqlmqr skeldvirei ykdansqvht lrkmvkekee aiqrqstlek kihelekqgt
      481 ikiqkkgdgd isilpvalgs gmvpagaeav pgtcatpgaa ssvplppppp plpalpgspe
      541 avpngpvavp vppppppppp pppppplpgp apdaapaapl pppppsappl pgtasptvvf
      601 nsglaavkik kpiktkfrmp vfnwvalkpn qingtvfnei dderiledln vdefeeifkt
      661 kaqgpamdlt sskqkipqkg snkvtlldan raknlaitlr kagktadeic kaihvfdlkt
      721 lpvdfveclm rflptenevk vlrlyererk plenlsdedr fmmqfskier lmqkmtimaf
      781 ignfaesiqm ltpqlhaiia asvsikssqk lkkileiila lgnymnsskr gavygfklqs
      841 ldllletkst drkqtllhyi snvvkekyqh valfynelhy vekaaavsle nvlldvkelq
      901 rgleltkrey tmhdhntmlk dfiqsnegkl kklqddakia qdafddavky fgenpkttpp
      961 svffpvfvrf vkaykqaeee nelrkkqeqa lmeklmeqea lmeqqdqksp shkskrqqqe
     1021 liaelrrrqv kdnrhvyegk dgaiediitd lrnqpyrrad alrrsvrrrf dehglrsnga
     1081 elam
//
LOCUS       XP_041323227            1080 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-like protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323227
VERSION     XP_041323227.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467293.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1080
                     /product="formin-like protein 2 isoform X2"
                     /calculated_mol_wt=122069
     Region          23..275
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          278..475
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          609..960
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1080
                     /gene="FMNL2"
                     /coded_by="XM_041467293.1:126..3368"
                     /db_xref="GeneID:121353440"
ORIGIN      
        1 mgnagsvdaq qtelrahsvp lklpmpepge leerfavvln amnlppdkar llrqydnekk
       61 welicdqerf qvknpphtyi qklkgyldpa vtrkkfrrrv qestqvlrel eislrtnhig
      121 wvreflneen kgldvlveyl sfaqyavtfd feslensves smdkskpwsr siedlhrgsn
      181 lpspvgnsis rsgrhstlry ntlpsrrtlk nsrlvskkdd vhvcimclra imnyqygfnm
      241 vmshphavne ialslnnknp rtkalvlell aavclvrggh eiilsafdnf kevcgekqrf
      301 eklmehfrne dnnidfmvac mqfinivvhs vedmnfrvhl qyeftklgld eyldklkhte
      361 sdklqvqiqa yldnvfdvga lledaetkna alerveelee nlshlseklq dteneamaki
      421 velekqlmqr skeldvirei ykdansqvht lrkmvkekee aiqrqstlek kihelekqgt
      481 ikiqkkgdgd isilpvalgs gmvpagaeav pgtcatpgaa ssvplppppp plpalpgspe
      541 avpngpvavp vppppppppp pppppplpgp apdaapaapl pppppsappl pgtasptvvf
      601 nsglaavkik kpiktkfrmp vfnwvalkpn qingtvfnei dderiledln vdefeeifkt
      661 kaqgpamdlt sskqkipqkg snkvtlldan raknlaitlr kagktadeic kaihvfdlkt
      721 lpvdfveclm rflptenevk vlrlyererk plenlsdedr fmmqfskier lmqkmtimaf
      781 ignfaesiqm ltpqlhaiia asvsikssqk lkkileiila lgnymnsskr gavygfklqs
      841 ldllletkst drkqtllhyi snvvkekyqh valfynelhy vekaaavsle nvlldvkelq
      901 rgleltkrey tmhdhntmlk dfiqsnegkl kklqddakia qdafddavky fgenpkttpp
      961 svffpvfvrf vkaykqaeee nelrkkqeqa lmeklmeqea lmeqqdqksp shkskrqqqe
     1021 liaelrrrqv kdnrhvyegk dgaiediita lkknnitkfp nvhsrvriss stavvedsqs
//
LOCUS       XP_041323229            1079 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-like protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323229
VERSION     XP_041323229.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467295.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1079
                     /product="formin-like protein 2 isoform X3"
                     /calculated_mol_wt=122140
     Region          23..275
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          278..475
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          609..960
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1079
                     /gene="FMNL2"
                     /coded_by="XM_041467295.1:126..3365"
                     /db_xref="GeneID:121353440"
ORIGIN      
        1 mgnagsvdaq qtelrahsvp lklpmpepge leerfavvln amnlppdkar llrqydnekk
       61 welicdqerf qvknpphtyi qklkgyldpa vtrkkfrrrv qestqvlrel eislrtnhig
      121 wvreflneen kgldvlveyl sfaqyavtfd feslensves smdkskpwsr siedlhrgsn
      181 lpspvgnsis rsgrhstlry ntlpsrrtlk nsrlvskkdd vhvcimclra imnyqygfnm
      241 vmshphavne ialslnnknp rtkalvlell aavclvrggh eiilsafdnf kevcgekqrf
      301 eklmehfrne dnnidfmvac mqfinivvhs vedmnfrvhl qyeftklgld eyldklkhte
      361 sdklqvqiqa yldnvfdvga lledaetkna alerveelee nlshlseklq dteneamaki
      421 velekqlmqr skeldvirei ykdansqvht lrkmvkekee aiqrqstlek kihelekqgt
      481 ikiqkkgdgd isilpvalgs gmvpagaeav pgtcatpgaa ssvplppppp plpalpgspe
      541 avpngpvavp vppppppppp pppppplpgp apdaapaapl pppppsappl pgtasptvvf
      601 nsglaavkik kpiktkfrmp vfnwvalkpn qingtvfnei dderiledln vdefeeifkt
      661 kaqgpamdlt sskqkipqkg snkvtlldan raknlaitlr kagktadeic kaihvfdlkt
      721 lpvdfveclm rflptenevk vlrlyererk plenlsdedr fmmqfskier lmqkmtimaf
      781 ignfaesiqm ltpqlhaiia asvsikssqk lkkileiila lgnymnsskr gavygfklqs
      841 ldllletkst drkqtllhyi snvvkekyqh valfynelhy vekaaavsle nvlldvkelq
      901 rgleltkrey tmhdhntmlk dfiqsnegkl kklqddakia qdafddavky fgenpkttpp
      961 svffpvfvrf vkaykqaeee nelrkkqeqa lmeklmeqea lmeqqdqksp shkskrqqqe
     1021 liaelrrrqv kdnrhvyegk dgaiediitv lktvpftars akrgsrffcd pvvpeefhy
//
LOCUS       XP_041323230            1077 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-like protein 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323230
VERSION     XP_041323230.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467296.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1077
                     /product="formin-like protein 2 isoform X4"
                     /calculated_mol_wt=121708
     Region          23..275
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          278..475
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          609..960
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1077
                     /gene="FMNL2"
                     /coded_by="XM_041467296.1:126..3359"
                     /db_xref="GeneID:121353440"
ORIGIN      
        1 mgnagsvdaq qtelrahsvp lklpmpepge leerfavvln amnlppdkar llrqydnekk
       61 welicdqerf qvknpphtyi qklkgyldpa vtrkkfrrrv qestqvlrel eislrtnhig
      121 wvreflneen kgldvlveyl sfaqyavtfd feslensves smdkskpwsr siedlhrgsn
      181 lpspvgnsis rsgrhstlry ntlpsrrtlk nsrlvskkdd vhvcimclra imnyqygfnm
      241 vmshphavne ialslnnknp rtkalvlell aavclvrggh eiilsafdnf kevcgekqrf
      301 eklmehfrne dnnidfmvac mqfinivvhs vedmnfrvhl qyeftklgld eyldklkhte
      361 sdklqvqiqa yldnvfdvga lledaetkna alerveelee nlshlseklq dteneamaki
      421 velekqlmqr skeldvirei ykdansqvht lrkmvkekee aiqrqstlek kihelekqgt
      481 ikiqkkgdgd isilpvalgs gmvpagaeav pgtcatpgaa ssvplppppp plpalpgspe
      541 avpngpvavp vppppppppp pppppplpgp apdaapaapl pppppsappl pgtasptvvf
      601 nsglaavkik kpiktkfrmp vfnwvalkpn qingtvfnei dderiledln vdefeeifkt
      661 kaqgpamdlt sskqkipqkg snkvtlldan raknlaitlr kagktadeic kaihvfdlkt
      721 lpvdfveclm rflptenevk vlrlyererk plenlsdedr fmmqfskier lmqkmtimaf
      781 ignfaesiqm ltpqlhaiia asvsikssqk lkkileiila lgnymnsskr gavygfklqs
      841 ldllletkst drkqtllhyi snvvkekyqh valfynelhy vekaaavsle nvlldvkelq
      901 rgleltkrey tmhdhntmlk dfiqsnegkl kklqddakia qdafddavky fgenpkttpp
      961 svffpvfvrf vkaykqaeee nelrkkqeqa lmeklmeqea lmeqqdqksp shkskrqqqe
     1021 liaelrrrqv kdnrhvyegk dgaiediita lkknnitkfp nvhsrisgts rtagptr
//
LOCUS       XP_041323231            1072 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-like protein 2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323231
VERSION     XP_041323231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1072
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1072
                     /product="formin-like protein 2 isoform X5"
                     /calculated_mol_wt=121095
     Region          23..275
                     /region_name="Drf_GBD"
                     /note="Diaphanous GTPase-binding Domain; pfam06371"
                     /db_xref="CDD:461886"
     Region          278..475
                     /region_name="Drf_FH3"
                     /note="Diaphanous FH3 Domain; pfam06367"
                     /db_xref="CDD:461885"
     Region          609..960
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1072
                     /gene="FMNL2"
                     /coded_by="XM_041467297.1:126..3344"
                     /db_xref="GeneID:121353440"
ORIGIN      
        1 mgnagsvdaq qtelrahsvp lklpmpepge leerfavvln amnlppdkar llrqydnekk
       61 welicdqerf qvknpphtyi qklkgyldpa vtrkkfrrrv qestqvlrel eislrtnhig
      121 wvreflneen kgldvlveyl sfaqyavtfd feslensves smdkskpwsr siedlhrgsn
      181 lpspvgnsis rsgrhstlry ntlpsrrtlk nsrlvskkdd vhvcimclra imnyqygfnm
      241 vmshphavne ialslnnknp rtkalvlell aavclvrggh eiilsafdnf kevcgekqrf
      301 eklmehfrne dnnidfmvac mqfinivvhs vedmnfrvhl qyeftklgld eyldklkhte
      361 sdklqvqiqa yldnvfdvga lledaetkna alerveelee nlshlseklq dteneamaki
      421 velekqlmqr skeldvirei ykdansqvht lrkmvkekee aiqrqstlek kihelekqgt
      481 ikiqkkgdgd isilpvalgs gmvpagaeav pgtcatpgaa ssvplppppp plpalpgspe
      541 avpngpvavp vppppppppp pppppplpgp apdaapaapl pppppsappl pgtasptvvf
      601 nsglaavkik kpiktkfrmp vfnwvalkpn qingtvfnei dderiledln vdefeeifkt
      661 kaqgpamdlt sskqkipqkg snkvtlldan raknlaitlr kagktadeic kaihvfdlkt
      721 lpvdfveclm rflptenevk vlrlyererk plenlsdedr fmmqfskier lmqkmtimaf
      781 ignfaesiqm ltpqlhaiia asvsikssqk lkkileiila lgnymnsskr gavygfklqs
      841 ldllletkst drkqtllhyi snvvkekyqh valfynelhy vekaaavsle nvlldvkelq
      901 rgleltkrey tmhdhntmlk dfiqsnegkl kklqddakia qdafddavky fgenpkttpp
      961 svffpvfvrf vkaykqaeee nelrkkqeqa lmeklmeqea lmeqqdqksp shkskrqqqe
     1021 liaelrrrqv kdnrhvyegk dgaiediita lkknnitkfp nvhsraaggr cg
//
LOCUS       XP_041323232            5810 aa            linear   VRT 06-MAY-2021
DEFINITION  nebulin [Pyrgilauda ruficollis].
ACCESSION   XP_041323232
VERSION     XP_041323232.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467298.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5810
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..5810
                     /product="nebulin"
                     /calculated_mol_wt=671454
     Region          112..141
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          153..179
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          252..282
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          535..565
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          576..603
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          614..641
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          780..809
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          858..885
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          919..949
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          988..1018
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1102..1129
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1237..1264
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1272..1298
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1346..1373
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1475..1505
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1515..1542
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1589..1616
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1758..1785
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1832..1859
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          1862..1892
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          1961..1991
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2075..2102
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2244..2271
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2318..2345
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2348..2378
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2447..2477
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2561..2588
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2690..2720
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2730..2757
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2804..2831
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          2933..2963
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          2973..3000
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3214..3241
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3250..3277
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3424..3451
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3664..3694
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          3879..3906
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          3986..4013
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          4233..4259
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          4262..4292
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          4372..4399
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          4513..4540
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          4648..4678
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          5043..5073
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          5114..5140
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          5393..5418
                     /region_name="NEBU"
                     /note="The Nebulin repeat is present also in Las1;
                     smart00227"
                     /db_xref="CDD:128523"
     Region          5557..5584
                     /region_name="Nebulin"
                     /note="Nebulin repeat; pfam00880"
                     /db_xref="CDD:459977"
     Region          5753..5810
                     /region_name="SH3_Nebulin_C"
                     /note="C-terminal Src Homology 3 domain of Nebulin;
                     cd11933"
                     /db_xref="CDD:212866"
     Site            order(5760,5762,5765,5769,5787..5788,5803,5805..5806)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212866"
     CDS             1..5810
                     /gene="NEB"
                     /coded_by="XM_041467298.1:259..17691"
                     /db_xref="GeneID:121353441"
ORIGIN      
        1 meeeeyeevv eyyieetiie egephevvte itetistdys ipetttttty taehtqpsge
       61 daappirkkt irtkvdpskf ltpylehsnk mkdlfsenky kekfrkekgk pyastidtpe
      121 irrikkvqdq lsevkyrmag evartichvd ekamdiehak kvsqqvskvl ykqnweenkd
      181 kyllppdape lvnaikntam fskklytedw dadktlfypy ndspelrrva qaqktlsdiv
      241 ykkghderka kftslpdppd veqakkvsrq lsdviyhedy knkvkgkwsq tpcydvavak
      301 mnaenlsmrk yqedfenmkd qiyfmqtetp eyeankrase nvskfkykad yekkkaiady
      361 nvlpatenpl lkqlktagni lsdklykeay eqsrgnkmny cetpkfqtda alknfsdvky
      421 kdayqknilg hylgsfedph qihcmkveam ksdknykady eeektkcyfp qtitqeyeai
      481 kkleqckdyt ykkhpdqtkf tsvtdspvqk qaeinskqls dilykskgee iihkyhlppd
      541 vpqfiqarvn aynisdanyk adwkktlakg ydlkpdaipi iaakasrnia sdykykesye
      601 kdkgkqvgfr slqddpklvh ymnvakiqsd reykkdyevt ktkyhspldm fsvtaakkaq
      661 evvtntgykq pihnytllpd svnlelsknv mqlqsdnlyk sdfnnwlrgv gwvpiqsldv
      721 ekakkateil sekkyrqhpd qlkfsipmda meqvlakqna ktmnkrlytd kwnkektsih
      781 vmpdtpeilq ckvnqmtmsd klykagweed kkkgydlqpd aipikaakss rdiasdykyk
      841 layekakgkh igfrsleddp klvhfmqvak mqsdreykkg yekaktnfht pvdmvsvvaa
      901 kkaqevatna nyknlihtyn vlpdamsiel aknmmqlqsd nqykaeydet mkgvgwlplg
      961 sleaeknkka meilsekkyr qhpdklkysv pmdsmnmvla lnnakimdeh kykqaweedk
     1021 kkihitpdip qialakanaf nlsekmyrss feetrkkgyd lradaipvka akasrdiasd
     1081 ykyklgyeqd kgklvgfrsl qddpklvhcm qvakmqsdre ykkayeaskt hyqtpsdals
     1141 vvaakeaqdr vtntnykrli hqymllpdam slelyrnmnq iqsdneykqd ykewfrgigw
     1201 spigsldvek skkateiasd rkyrqhpsmf rftkqndamd lvlakqnani mnkhayteaw
     1261 ekdktqvhvm pdtpdilqak qnktnysqkl yklgweemik kgydltpeam svkaakasrd
     1321 iasdfkykeg yrkqqghhig frslqddpkm lwsmqvakmq sereykkdfe kwktkfnmpv
     1381 dmlgfllakk cqelvsdvdy krilhrwtcl pdqvdvteak rvnelqsdnl yksdlqwlrg
     1441 igwsplgsle aeknkkasei lsdkkyrqhp dtikftsipd amdvvlaksn aknrsdilyk
     1501 eawnkdktkv himpdtpeil laksnlints dkrykvgyee lkkkgydlpp daiplqaaka
     1561 srdiaseyky ktayrkqlgh higarniedd pkmmwsmhva kiqsdreykk afeksktnfs
     1621 spvdmlgivl akkcqelvsd adyrhplhrw tclpdqndvv haktvydlqs dnvyksdlqw
     1681 lrgigwsplg sldveknkra seilsdkkyr qhpdtikfts lpdsmpmvla khnskimdqr
     1741 syisawekdk tsihimpdtp gillaqqnkv nfseklykqa meeekkkgyd mradaipiks
     1801 akasrdiasd ykykegyrkq lghhigarni eddpkmmwsm hvakiqsdre ykkafekskt
     1861 nfsspvdmlg vvlakkcqel vsdvdyrhyl hewtclpdqn dvihakqayd lqsdncyksd
     1921 lewlrgigwv pigsleveka kkageilsdk iyrqhpdtik ftsipdslpm vlakqnadtm
     1981 nkrlyteawd kdktqihimp dtpeitlare nkknyslkqy rqamedskkk gydlradaip
     2041 iqaakasrqi asdykykegy rkqlghhiga rnieddpkmm wsmhvakiqs dreykkafek
     2101 sktnfsspvd mlgivlakkc qelvsdadyr hplhrwtclp dqndvvhakt vydlqsdnvy
     2161 ksdlqwlrgi gwsplgslda eknkraseil sdkkyrqhpd tikftslpds mpmvlakhns
     2221 qimdqrsyis awekdktsih impdtpgill aqqnkvnfse klykqameee kkkgydmrad
     2281 aipiksakas rdiasdykyk egyrkqlghh igarnieddp kmmwsmhvak iqsdreykka
     2341 feksktnfss pvdmlgvvla kkcqelvsdv dyrhylhewt clpdqndvih akqaydlqsd
     2401 ncyksdlewl rgigwvpigs levekakkag eilsdkiyrq hpdtikftsi pdslpmvlak
     2461 qnadtmnkrl yteawdkdkt qihimpdtpe itlarenkkn yslkqyrqam edskkkgydl
     2521 radaipiqaa kasrqiasdy kykegyrkql ghhigarnie ddpkmmwsmh vakiqsdrey
     2581 kkdfeksktr fsspvdmlgi vlakkcqglv sdvdyrhylh qwiclpdqnd vihakqaydl
     2641 qsdncyksdl ewlrgigwvp igslevekak rageilsdki yrqrpdtikf tsvtdslemv
     2701 lakqnadtmn krlyteawnk dkttihvmpd tpeillakqn rvnysekmyk laleeskkkg
     2761 ydlrfdaipi qsakasreia seykykegyr kqlghhigar nieddpkmmw smhvakiqsd
     2821 reykkdfeks ktrfsspvdm lgivlakkcq glvsdvdyrh ylhqwiclpd qndvihakqa
     2881 ydlqsdavyk sdlewlrgig wvpigsleve kakrageils dkiyrqcpdt ikftsvtdsl
     2941 emvlakqnad tmnkrlytea wnkdkttihv mpdtpeilla kqnrvnysek qykgawdelk
     3001 mnydlradai piktakasre iasdykykle hekqkghyvg vpnakgdski qfaldvakvq
     3061 sereykkffa kqktqchlpv dmmsivsakh gqalvsdady rhylhqwicl pdqndvihar
     3121 qaydlqsdav ykadlewlrg igwlpndslg vkhvkyagdl lserkyrtka etlpftpvad
     3181 rvdyvtakns teilndikyr kewneaktny tltdtpqldm areaarilnq nlykesweke
     3241 katgyllppd tvqishakhs sdvqselkyk aeyvkqrghy vgvakmrddp klvwyehage
     3301 iqndrlyksd ynktkskihm psdamavvaa kecqnlvsdv eyrqylhqwt chpdqndvih
     3361 arqaydlqsd niykadlewl rgcgwiplds vehkkvknaq elinkraytk ealenfskyt
     3421 svvdtpeitl akmnsvnqsd lkyketfnqe kgqyigsddt palhhakdma llhsekhykk
     3481 awelskpigy sldekyvplv gakhanhins elkykeiyek lkghylagkd isdfpsvihs
     3541 lefqkmrsvl ayrknyedtk knvhiptdmm nhvlakkcqy ilsdleyrty fhqwscspee
     3601 ndviharkaq eilsdsvykd dlnwlkglgc yvwdtpqilq akksydlqsq ikytsagken
     3661 fqnfsvvtdt pvyvtalqsa anasdvkyke efhktkdkyt tvtdtvdser vqslkhlysd
     3721 nlykkawdkv katsyalpsd tvalarakel khnasivkyr eeydkfkaly tlprgveddp
     3781 nterclrvgk lnidrlykea yektkakvhi vpdmvdiisa kdaqkkisev dyrtrlhdwl
     3841 clpdlqvnth vrrvtdqvsd viykddlnwl kgigcfvwdt peilhakqay dlrsdikyks
     3901 kaekmkkdft vvtdtpvyvq nvisalnlse avyrgdykkn vqgkmiptdk tvdlerayna
     3961 nkiqsenlyr wagvnalptg yslptdtpnf qhakhaqrig snlkykeaye hmkakgytlg
     4021 pqdvgfenvr kvnqvinerl yratyhknkd kihttpdtpe irqvratqea vsdliyksdf
     4081 fkmqghlisl pytphvlhcr yvgditsdik ykedlrwlkg lgcflydtpd mvrardlrkl
     4141 wsnyiytsta kkmwpkvqvv ldtpgyravq elkthlselv yraagnelkt kytsildtpd
     4201 firaktgqki qsqylyvela tkerphhhad gqtpafahar nvkdmisekk yktqyekmkd
     4261 kytpvpdtpv lvrakrayln asdlryketf entkgkyhtv kdaldivyhr kvtddissvk
     4321 ykenymsqlg iwrsipdrpe hfhhrlvtda isdvkykedl ewlkgtgcyv wdtpsfvlae
     4381 knkvlysgck ykenfektks kfkyvadsps nehfkyatql vdmksyksfa kmllqhgcne
     4441 ilrpdmltal yntylwsqiq ykkdyekkkd kyttvldtpe ylrttkvnkq isdiiykley
     4501 nkakpkgytt iqdtpmllhv rkvkdrisdl kykemyersk srcnvvadsv hiktprhayk
     4561 lnsnldykkk yeaakahwhl iadrpdfvqa aksslqqsdy eykldreflk gcklsvtddk
     4621 ntvlalnnai lasdikykek hnkargtyhv vpdtpqilla knvsslvsen kykeqskkql
     4681 phgsfttlpe trdtvhvkev tknvsetnyk kkfvkekgks nysvmleppe vkhamevakn
     4741 qstieykkda ksklhytpia drpdikkatq aaklisniey kkrgaagvgv tmlgrpdiel
     4801 akevskltsq vkykenfake lgkkpkydlk eakiyktlkd ahnmasevky kadlkklhkp
     4861 vtdmkesllm nhvlstsqla savkyrekye kekgkpmldf etptyltake sqlmqsekey
     4921 kkdfeesmkg rnltglevtp sllhvkyatk iasekeyrkd leegvkgkgl taleetpdml
     4981 raknatqiln ekeykraleq eirgkgltel aletpdfvra rnatdiasqi kykqlaemek
     5041 anytsvvdtp eiihaqqvkn lssqkkyked aeksmpyyvp vadtpemqrv renqknfsml
     5101 qyqsdlqnsk gkvtvvqdtp eilrvkenqk nfssilyked igtgttiekt pemqrvkrtq
     5161 dnissvkyke sigkgtpipd lpevkrvket qkhissvlyk eelgtgtptp ltpemervkr
     5221 nqeqissvly keglgagtat pvtpemervr rnqehissvl ykeelgtgtp tpvtpeierv
     5281 krnqehissv lykeelgtgt ptpvtpeier vkrnqehiss vlyreqlgag tpipvtpele
     5341 rvrrnqehls svlykesvgt gtptpvtpem ervkrnqeic ssvlykenig katptpvtpe
     5401 mervkrnqei issvlykenv gkvtptpitp emervkrnqe iissvlyken vgqatptpvt
     5461 pemervkrnq eqissvayre glgkatpspl tpemervkrn qeqissvlyk ehmakgtptp
     5521 ltpemerakr nqenissvly sdsfrkqvqg kaayvldtpe mrrvretqkh istvkyhedf
     5581 ekskgsftpv vtdpitervk knmqdfsdis yrgiqrrvve merkrvdqdq enltglrvwr
     5641 tnpgsvfdyd paedniqsrs lhmisvqaqr rsrehsrsas alsisgaade ksepsdgtdq
     5701 rlsyysnggf ftttatvgyk qvktielpqq rsssvatqqt tvssvpshps tagktframy
     5761 dytaadadev sfkdgdtivn vqaidegwmy gtvqrtgktg mlpanyveav
//
LOCUS       XP_041323233             493 aa            linear   VRT 06-MAY-2021
DEFINITION  G protein-activated inward rectifier potassium channel 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323233
VERSION     XP_041323233.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467299.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="G protein-activated inward rectifier potassium
                     channel 1 isoform X1"
                     /calculated_mol_wt=55418
     Region          39..179
                     /region_name="IRK"
                     /note="Inward rectifier potassium channel transmembrane
                     domain; pfam01007"
                     /db_xref="CDD:460023"
     Region          186..356
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:465439"
     CDS             1..493
                     /gene="KCNJ3"
                     /coded_by="XM_041467299.1:87..1568"
                     /db_xref="GeneID:121353442"
ORIGIN      
        1 msalrrklgd eyqvvstsas ggglppprsa prgkrqrfvd kngrcnvqhg nlggetsryl
       61 sdlfttlvdl kwrwnlfifi ltytvawlfm asmwwviaym rgdlnkahdd sytpcvanvy
      121 nfpsaflffi eteatigygy ryitdkcpeg iilflfqsil gsivdaflig cmfikmsqpk
      181 kraetlmfse haaismrdgk ltlmfrvgnl rnshmvsaqi rckllksrqt pegeflpldq
      241 leldvgfstg adqlflvspl tichvidsks pfydlsqrsm hteqfeivvi legivettgm
      301 tcqartsyte devlwghrff pvisleegff kvdysqfhat fevptppysv keqeemllms
      361 splippavsn skernnsvec ldgldevgtk lpsklqkitg rddfpkkllr mssttsekay
      421 smgdlpmklq rissvpgnse eklgskttkm msdpmsqsva elppklqkls ggggrmegnl
      481 ppklrkmnsd rft
//
LOCUS       XP_041323234             305 aa            linear   VRT 06-MAY-2021
DEFINITION  G protein-activated inward rectifier potassium channel 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323234
VERSION     XP_041323234.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467300.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="G protein-activated inward rectifier potassium
                     channel 1 isoform X2"
                     /calculated_mol_wt=34441
     Region          39..179
                     /region_name="IRK"
                     /note="Inward rectifier potassium channel transmembrane
                     domain; pfam01007"
                     /db_xref="CDD:460023"
     Region          186..>304
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:465439"
     CDS             1..305
                     /gene="KCNJ3"
                     /coded_by="XM_041467300.1:87..1004"
                     /db_xref="GeneID:121353442"
ORIGIN      
        1 msalrrklgd eyqvvstsas ggglppprsa prgkrqrfvd kngrcnvqhg nlggetsryl
       61 sdlfttlvdl kwrwnlfifi ltytvawlfm asmwwviaym rgdlnkahdd sytpcvanvy
      121 nfpsaflffi eteatigygy ryitdkcpeg iilflfqsil gsivdaflig cmfikmsqpk
      181 kraetlmfse haaismrdgk ltlmfrvgnl rnshmvsaqi rckllksrqt pegeflpldq
      241 leldvgfstg adqlflvspl tichvidsks pfydlsqrsm hteqfeivvi legivettds
      301 sqecv
//
LOCUS       XP_041323235             303 aa            linear   VRT 06-MAY-2021
DEFINITION  G protein-activated inward rectifier potassium channel 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323235
VERSION     XP_041323235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="G protein-activated inward rectifier potassium
                     channel 1 isoform X3"
                     /calculated_mol_wt=34197
     Region          39..179
                     /region_name="IRK"
                     /note="Inward rectifier potassium channel transmembrane
                     domain; pfam01007"
                     /db_xref="CDD:460023"
     Region          186..>299
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:465439"
     CDS             1..303
                     /gene="KCNJ3"
                     /coded_by="XM_041467301.1:87..998"
                     /db_xref="GeneID:121353442"
ORIGIN      
        1 msalrrklgd eyqvvstsas ggglppprsa prgkrqrfvd kngrcnvqhg nlggetsryl
       61 sdlfttlvdl kwrwnlfifi ltytvawlfm asmwwviaym rgdlnkahdd sytpcvanvy
      121 nfpsaflffi eteatigygy ryitdkcpeg iilflfqsil gsivdaflig cmfikmsqpk
      181 kraetlmfse haaismrdgk ltlmfrvgnl rnshmvsaqi rckllksrqt pegeflpldq
      241 leldvgfstg adqlflvspl tichvidsks pfydlsqrsm hteqfeivvi legivettgk
      301 gdf
//
LOCUS       XP_041323236             509 aa            linear   VRT 06-MAY-2021
DEFINITION  signal transducing adapter molecule 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323236
VERSION     XP_041323236.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467302.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="signal transducing adapter molecule 2 isoform
                     X1"
                     /calculated_mol_wt=55670
     Region          9..146
                     /region_name="VHS_STAM2"
                     /note="VHS (Vps27/Hrs/STAM) domain of Signal Transducing
                     Adapter Molecule 2; cd16999"
                     /db_xref="CDD:340796"
     Site            order(23..27,30..31,34,71,74..75)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:340796"
     Region          203..259
                     /region_name="SH3_STAM2"
                     /note="Src homology 3 domain of Signal Transducing Adaptor
                     Molecule 2; cd11963"
                     /db_xref="CDD:212896"
     Site            order(210,212,215..216,218..219,237..238,251,253..254)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212896"
     Region          284..374
                     /region_name="GAT_STAM2"
                     /note="non-canonical GAT domain found in signal
                     transducing adapter molecule 2 (STAM-2) and similar
                     proteins; cd21390"
                     /db_xref="CDD:410595"
     Site            order(290,292,295..296,298..299,302,305,307..308,310,313,
                     317,321,324..325,328..329,331..336,338..340,342..343,
                     345..352,354..356,358..359,362..363,365)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:410595"
     Region          <376..>507
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..509
                     /gene="STAM2"
                     /coded_by="XM_041467302.1:81..1610"
                     /db_xref="GeneID:121353443"
ORIGIN      
        1 mplfaanpfe qdvekatney ntsedwglim dicdkvgstp ngakdclkai mkrmnhkvph
       61 valqaltllg acvsncgkif hlevcsrdfa tearaiinka hpkvseklkt lmvewseefq
      121 kdpqcslisa tikslkeegv tfpaagsqas tsaakngsss skskededia kaielslqeq
      181 kqqqmetksl yppaemaqnp qslrkvraly dfeavednel tfksgeiifv lddsdanwwk
      241 genhrgvglf psnfvtsdls vepeaavdki svpednaeei kkaepepvyi dedkmdktlq
      301 vlqsidptdl kldspdllns edicqqmgpm idekleeidr khselselnv kvlealelyn
      361 klmnespmys aysklqhpaq fpptssgvsv qsypvqppsg nymiqgvsms pgyslapeqv
      421 gqvrslpqsi nsaatqpppa aylspdpalp qpfpsvpsvt gtaafpqhqm gvavdvaafq
      481 snqgpgypva lpahsllqqq pnfhqqpll
//
LOCUS       XP_041323238             485 aa            linear   VRT 06-MAY-2021
DEFINITION  signal transducing adapter molecule 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323238
VERSION     XP_041323238.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467304.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="signal transducing adapter molecule 2 isoform
                     X2"
                     /calculated_mol_wt=53674
     Region          9..146
                     /region_name="VHS_STAM2"
                     /note="VHS (Vps27/Hrs/STAM) domain of Signal Transducing
                     Adapter Molecule 2; cd16999"
                     /db_xref="CDD:340796"
     Site            order(23..27,30..31,34,71,74..75)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:340796"
     Region          203..259
                     /region_name="SH3_STAM2"
                     /note="Src homology 3 domain of Signal Transducing Adaptor
                     Molecule 2; cd11963"
                     /db_xref="CDD:212896"
     Site            order(210,212,215..216,218..219,237..238,251,253..254)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212896"
     Region          284..374
                     /region_name="GAT_STAM2"
                     /note="non-canonical GAT domain found in signal
                     transducing adapter molecule 2 (STAM-2) and similar
                     proteins; cd21390"
                     /db_xref="CDD:410595"
     Site            order(290,292,295..296,298..299,302,305,307..308,310,313,
                     317,321,324..325,328..329,331..336,338..340,342..343,
                     345..352,354..356,358..359,362..363,365)
                     /site_type="other"
                     /note="putative heterodimer interface [polypeptide
                     binding]"
                     /db_xref="CDD:410595"
     CDS             1..485
                     /gene="STAM2"
                     /coded_by="XM_041467304.1:41..1498"
                     /db_xref="GeneID:121353443"
ORIGIN      
        1 mplfaanpfe qdvekatney ntsedwglim dicdkvgstp ngakdclkai mkrmnhkvph
       61 valqaltllg acvsncgkif hlevcsrdfa tearaiinka hpkvseklkt lmvewseefq
      121 kdpqcslisa tikslkeegv tfpaagsqas tsaakngsss skskededia kaielslqeq
      181 kqqqmetksl yppaemaqnp qslrkvraly dfeavednel tfksgeiifv lddsdanwwk
      241 genhrgvglf psnfvtsdls vepeaavdki svpednaeei kkaepepvyi dedkmdktlq
      301 vlqsidptdl kldspdllns edicqqmgpm idekleeidr khselselnv kvlealelyn
      361 klmnespmys aysklqhpaq fpptssgvsv qsypvqppsg nymiqgvsms pgyslapeqv
      421 gqvrslpqsi nsaatqpppa aylsgfrepl hfgvpflkda prnprgpwlq leeeilplrt
      481 tslwk
//
LOCUS       XP_041323239             137 aa            linear   VRT 06-MAY-2021
DEFINITION  protein reprimo [Pyrgilauda ruficollis].
ACCESSION   XP_041323239
VERSION     XP_041323239.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467305.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="protein reprimo"
                     /calculated_mol_wt=13600
     CDS             1..137
                     /gene="RPRM"
                     /coded_by="XM_041467305.1:192..605"
                     /db_xref="GeneID:121353444"
ORIGIN      
        1 mngssaglpa gmngslglpa gmngslgmpa lpngssaaaa gllagaggaa leleralrcc
       61 taasvvtdgs gaaadersly imrvvqiavm cvlaltvvfg ifflgcnlli ksegminflv
      121 kerrpskeve avvvgpy
//
LOCUS       XP_041323240             309 aa            linear   VRT 06-MAY-2021
DEFINITION  cobalamin trafficking protein CblD isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323240
VERSION     XP_041323240.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467306.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..309
                     /product="cobalamin trafficking protein CblD isoform X1"
                     /calculated_mol_wt=34498
     Region          38..306
                     /region_name="MMADHC"
                     /note="Methylmalonic aciduria and homocystinuria type D
                     protein; pfam10229"
                     /db_xref="CDD:431154"
     CDS             1..309
                     /gene="MMADHC"
                     /coded_by="XM_041467306.1:16..945"
                     /db_xref="GeneID:121353445"
ORIGIN      
        1 mkllfyfilk fifftpqvlc nrarlvtylp gfysllrrvg nakafstags sgsdephvaa
       61 appdlcprtv wpdelmgpfg pqdqrfqlpg nigfgchlhg tatqraqpaq slpdllaeps
      121 asdrhefvma qyinefqgsd apqkqqinna etyfenakve cavqacpell rkdfqalfpe
      181 vspkrltvlt vtqkskhdms vwsqeveeer elllenfing akeicyaiss egywadfidp
      241 ssglaffgpy tnnplletde ryrhlgfavd dlgcckvirh nlwgthvlvg siftnaepds
      301 pimrklsgn
//
LOCUS       XP_041323241             295 aa            linear   VRT 06-MAY-2021
DEFINITION  cobalamin trafficking protein CblD isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323241
VERSION     XP_041323241.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467307.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="cobalamin trafficking protein CblD isoform X2"
                     /calculated_mol_wt=32636
     Region          24..292
                     /region_name="MMADHC"
                     /note="Methylmalonic aciduria and homocystinuria type D
                     protein; pfam10229"
                     /db_xref="CDD:431154"
     CDS             1..295
                     /gene="MMADHC"
                     /coded_by="XM_041467307.1:89..976"
                     /db_xref="GeneID:121353445"
ORIGIN      
        1 manvlcnrar lvtylpgfys llrrvgnaka fstagssgsd ephvaaappd lcprtvwpde
       61 lmgpfgpqdq rfqlpgnigf gchlhgtatq raqpaqslpd llaepsasdr hefvmaqyin
      121 efqgsdapqk qqinnaetyf enakvecavq acpellrkdf qalfpevspk rltvltvtqk
      181 skhdmsvwsq eveeerelll enfingakei cyaissegyw adfidpssgl affgpytnnp
      241 lletderyrh lgfavddlgc ckvirhnlwg thvlvgsift naepdspimr klsgn
//
LOCUS       XP_041323242             272 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor-inducible gene 6 protein isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323242
VERSION     XP_041323242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467308.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..272
                     /product="tumor necrosis factor-inducible gene 6 protein
                     isoform X1"
                     /calculated_mol_wt=30025
     Region          36..128
                     /region_name="Link_domain_TSG_6_like"
                     /note="This is the extracellular link domain of the type
                     found in human TSG-6. The link domain is a hyaluronan
                     (HA)-binding domain. TSG-6 is the protein product of tumor
                     necrosis factor-stimulated gene-6. TSG-6 is up-regulated
                     in inflammatory lesions and in the...; cd03515"
                     /db_xref="CDD:239592"
     Site            order(46..47,94,105,113)
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239592"
     Region          135..244
                     /region_name="CUB"
                     /note="CUB domain; pfam00431"
                     /db_xref="CDD:395345"
     Site            order(144,145,147,174,179,217,241,243,245..246)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     CDS             1..272
                     /gene="TNFAIP6"
                     /coded_by="XM_041467308.1:45..863"
                     /db_xref="GeneID:121353446"
ORIGIN      
        1 mmallllsal lceqaaawgf rdgvlhnsiw leraagvyhr earsgkyrlt faearavcey
       61 egghlatlqq leaarkigfh vcaagwmakg rvgypivkag ancgfgktgi vdygirlnrs
      121 erwdaycynp ngkecggvft dskhvfkspg ypneyeneqv cywhirvryg qrihlqflef
      181 dveddtacla dflevydsyd dvngfvgrfc gdelpddiis tgnvmtlkfl tdasvtaggf
      241 qiryssldtp aqaknataqg ksgflagkfg im
//
LOCUS       XP_041323243             226 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor-inducible gene 6 protein isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323243
VERSION     XP_041323243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..226
                     /product="tumor necrosis factor-inducible gene 6 protein
                     isoform X2"
                     /calculated_mol_wt=24865
     Region          <31..82
                     /region_name="Link_Domain"
                     /note="The link domain is a hyaluronan (HA)-binding
                     domain. It functions to mediate adhesive interactions
                     during inflammatory leukocyte homing and tumor metastasis.
                     It is found in the CD44 receptor and in human TSG-6. TSG-6
                     is the protein product of the tumor...; cl02612"
                     /db_xref="CDD:470631"
     Region          89..198
                     /region_name="CUB"
                     /note="CUB domain; pfam00431"
                     /db_xref="CDD:395345"
     Site            order(98,99,101,128,133,171,195,197,199..200)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     CDS             1..226
                     /gene="TNFAIP6"
                     /coded_by="XM_041467309.1:45..725"
                     /db_xref="GeneID:121353446"
ORIGIN      
        1 mmallllsal lceqaaawgf rdgvlhnsiw lgfhvcaagw makgrvgypi vkagancgfg
       61 ktgivdygir lnrserwday cynpngkecg gvftdskhvf kspgypneye neqvcywhir
      121 vrygqrihlq flefdveddt acladflevy dsyddvngfv grfcgdelpd diistgnvmt
      181 lkfltdasvt aggfqiryss ldtpaqakna taqgksgfla gkfgim
//
LOCUS       XP_041323244             244 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoE [Pyrgilauda ruficollis].
ACCESSION   XP_041323244
VERSION     XP_041323244.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467310.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..244
                     /product="rho-related GTP-binding protein RhoE"
                     /calculated_mol_wt=27180
     Region          19..200
                     /region_name="Rnd3_RhoE_Rho8"
                     /note="Rnd3/RhoE/Rho8 GTPases; cd04172"
                     /db_xref="CDD:206735"
     Site            order(25,55..56,58..59,61,63,72,76..77,79..81,87,90)
                     /site_type="other"
                     /note="putative GEF (guanine nucleotide exchange factor)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206735"
     Site            30..37
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206735"
     Site            order(33..38,77..78,80,136,138,179..180)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206735"
     Site            54..60
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206735"
     Site            55
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206735"
     Site            order(56,79,87,89)
                     /site_type="active"
                     /note="putative GDI (guanine nucleotide dissociation
                     inhibitor) interaction [active]"
                     /db_xref="CDD:206735"
     Site            order(56..57,81,87)
                     /site_type="other"
                     /note="putative GAP (GTPase-activating protein)
                     interaction site [polypeptide binding]"
                     /db_xref="CDD:206735"
     Site            order(57..58,87,90)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206735"
     Site            77..80
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206735"
     Site            order(80..81,87..90,95..97)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206735"
     Site            135..138
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206735"
     Site            178..180
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206735"
     CDS             1..244
                     /gene="RND3"
                     /coded_by="XM_041467310.1:202..936"
                     /db_xref="GeneID:121353447"
ORIGIN      
        1 mkerrasqkl sskavmdpnq nvkckivvvg dsqcgktall hvfakdcfpe syvptvfeny
       61 tasfeidtqr ielslwdtsg spyydnvrpl sypdsdavli cfdisrpetl dsvlkkwkge
      121 iqefcpntkm llvgcksdlr tdvstlvels nhrqtpvsyd qganmakqig aatyiecsal
      181 qsensvrdif hvatlacvnk tnknvkrnks qratkrishm pgrpelstva tdlrkdkaks
      241 ctvm
//
LOCUS       XP_041323245             391 aa            linear   VRT 06-MAY-2021
DEFINITION  N-myc-interactor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323245
VERSION     XP_041323245.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467311.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="N-myc-interactor isoform X1"
                     /calculated_mol_wt=44559
     Region          54..>134
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          173..264
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     Region          274..362
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     CDS             1..391
                     /gene="NMI"
                     /coded_by="XM_041467311.1:239..1414"
                     /db_xref="GeneID:121353448"
ORIGIN      
        1 mdatrpplsl hdngfsmvsp dplgtsleem eklkeelrlw kirvedieka kadlfsskvr
       61 adtecdraek eladlkeqek qrqdritsse qellllkqen telkkeiekl kedleehssq
      121 dnlleikkkv aemklkfthl eemkddgadr dmdahcvfga atktpfrlnq nqalltfede
      181 evaqrltkms khcvnldnrt anvtvkpfel dmgfqfelhv tvsgrkinvs dipelsiped
      241 wmrdklelhf ykteqaeggg eienvtynkg sgtavitflk pgasynfvgc tkypfcaeer
      301 wfnisvsphf dfhlrkfqph crvskktill kgipeveede esvqdmieih fqkpsnggge
      361 iegikylsrg aayvcfeedt gnatseitgd s
//
LOCUS       XP_041323246             391 aa            linear   VRT 06-MAY-2021
DEFINITION  N-myc-interactor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323246
VERSION     XP_041323246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="N-myc-interactor isoform X1"
                     /calculated_mol_wt=44559
     Region          54..>134
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          173..264
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     Region          274..362
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     CDS             1..391
                     /gene="NMI"
                     /coded_by="XM_041467312.1:249..1424"
                     /db_xref="GeneID:121353448"
ORIGIN      
        1 mdatrpplsl hdngfsmvsp dplgtsleem eklkeelrlw kirvedieka kadlfsskvr
       61 adtecdraek eladlkeqek qrqdritsse qellllkqen telkkeiekl kedleehssq
      121 dnlleikkkv aemklkfthl eemkddgadr dmdahcvfga atktpfrlnq nqalltfede
      181 evaqrltkms khcvnldnrt anvtvkpfel dmgfqfelhv tvsgrkinvs dipelsiped
      241 wmrdklelhf ykteqaeggg eienvtynkg sgtavitflk pgasynfvgc tkypfcaeer
      301 wfnisvsphf dfhlrkfqph crvskktill kgipeveede esvqdmieih fqkpsnggge
      361 iegikylsrg aayvcfeedt gnatseitgd s
//
LOCUS       XP_041323247             391 aa            linear   VRT 06-MAY-2021
DEFINITION  N-myc-interactor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323247
VERSION     XP_041323247.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467313.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="N-myc-interactor isoform X1"
                     /calculated_mol_wt=44559
     Region          54..>134
                     /region_name="CwlO1"
                     /note="Uncharacterized N-terminal coiled-coil domain of
                     peptidoglycan hydrolase CwlO [Function unknown]; COG3883"
                     /db_xref="CDD:443091"
     Region          173..264
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     Region          274..362
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     CDS             1..391
                     /gene="NMI"
                     /coded_by="XM_041467313.1:138..1313"
                     /db_xref="GeneID:121353448"
ORIGIN      
        1 mdatrpplsl hdngfsmvsp dplgtsleem eklkeelrlw kirvedieka kadlfsskvr
       61 adtecdraek eladlkeqek qrqdritsse qellllkqen telkkeiekl kedleehssq
      121 dnlleikkkv aemklkfthl eemkddgadr dmdahcvfga atktpfrlnq nqalltfede
      181 evaqrltkms khcvnldnrt anvtvkpfel dmgfqfelhv tvsgrkinvs dipelsiped
      241 wmrdklelhf ykteqaeggg eienvtynkg sgtavitflk pgasynfvgc tkypfcaeer
      301 wfnisvsphf dfhlrkfqph crvskktill kgipeveede esvqdmieih fqkpsnggge
      361 iegikylsrg aayvcfeedt gnatseitgd s
//
LOCUS       XP_041323248             390 aa            linear   VRT 06-MAY-2021
DEFINITION  N-myc-interactor isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323248
VERSION     XP_041323248.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467314.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..390
                     /product="N-myc-interactor isoform X2"
                     /calculated_mol_wt=44431
     Region          43..>141
                     /region_name="DR0291"
                     /note="Predicted nucleic acid-binding protein DR0291,
                     contains C4-type Zn-ribbon domain [General function
                     prediction only]; COG1579"
                     /db_xref="CDD:441187"
     Region          172..263
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     Region          273..361
                     /region_name="NID"
                     /note="Nmi/IFP 35 domain (NID); pfam07292"
                     /db_xref="CDD:462137"
     CDS             1..390
                     /gene="NMI"
                     /coded_by="XM_041467314.1:230..1402"
                     /db_xref="GeneID:121353448"
ORIGIN      
        1 mdatrpplsl hdngfsmvsp dplgtsleem eklkeelrlw kirvedieka kadlfsskvr
       61 adtecdraek eladlkeqek qrqdritsse ellllkqent elkkeieklk edleehssqd
      121 nlleikkkva emklkfthle emkddgadrd mdahcvfgaa tktpfrlnqn qalltfedee
      181 vaqrltkmsk hcvnldnrta nvtvkpfeld mgfqfelhvt vsgrkinvsd ipelsipedw
      241 mrdklelhfy kteqaeggge ienvtynkgs gtavitflkp gasynfvgct kypfcaeerw
      301 fnisvsphfd fhlrkfqphc rvskktillk gipeveedee svqdmieihf qkpsngggei
      361 egikylsrga ayvcfeedtg natseitgds
//
LOCUS       XP_041323249            2217 aa            linear   VRT 06-MAY-2021
DEFINITION  telomere-associated protein RIF1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323249
VERSION     XP_041323249.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467315.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2217
                     /product="telomere-associated protein RIF1"
                     /calculated_mol_wt=239356
     Region          44..339
                     /region_name="Rif1_N"
                     /note="Rap1-interacting factor 1 N terminal; pfam12231"
                     /db_xref="CDD:463499"
     Region          <997..1716
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          2054..2101
                     /region_name="Rif1_CTD_C-II_like"
                     /note="Saccharomyces cerevisiae Rap1-interacting factor 1
                     CTD domain, metazoan Rif1 C-II domains and related
                     domains; cd14267"
                     /db_xref="CDD:341312"
     Site            order(2054..2057,2059..2060,2062..2064,2066..2072,
                     2074..2079,2081..2088,2092..2101)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:341312"
     Site            order(2054..2057,2059..2060,2062..2064,2066..2072,
                     2074..2079,2081..2083,2085..2087,2092..2094,2096..2097,
                     2099..2101)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:341312"
     Site            order(2084,2087..2088,2094..2095,2097..2098,2101)
                     /site_type="other"
                     /note="interdimer interface [polypeptide binding]"
                     /db_xref="CDD:341312"
     CDS             1..2217
                     /gene="RIF1"
                     /coded_by="XM_041467315.1:1..6654"
                     /db_xref="GeneID:121353449"
ORIGIN      
        1 msapgpeaep kpaapepaag sslgpllhtl edpaappgel tdahltivsr lsgeggkaft
       61 adfrkhfpql ckvfkellaa vnsvavkssd kntrtralwv iskqafppev vkkevsnils
      121 tletiltkge vqsvvveyet lnviirlieq apaqmgeeav rwakliiplv vhsahkvqlr
      181 gatalemgmp lllqkqqeva avtehlmttk liselqklfs sknetfvlkl wplfvrllgk
      241 tlhrsgsfin sllqleelgf rsgspvvkki afiawkslid nfalnpdilc sakrlkllmq
      301 plssihvrte alaltklevw wyllmrlgph lpsnfeqvcv pliqstlsvd paaafpgtps
      361 rpnnpslgsa apgqkpgpvl lvspgtprma lnsssaggql fpsiqllgfe mllhflmgpq
      421 vvdfakqnkl vlsleplqyp lisspsffck hastlinavq dgfiaigkev pdcllnviwk
      481 dingyvktai eagnkkekqg seiltmllqa lkntvrsnal pvqkvlslid itvqelppkv
      541 lgspayqvad mdllngtpal fliqlpfhnn lleccvtder ffgilealvg calsgptsal
      601 afsesvlcvi dqsagqvgnk ehlwrmwsiv vhpltewinq nnevnqgdal ehnfsavysa
      661 lllpvshifp tqgfpqpslk sllrswsdly rafarcaalv ataeenlcce elcakimsgl
      721 egetpvvfsm leglthlvsv mvdcinfapy gtkfqpknrs pqtptdwakk kkeplgklss
      781 lsklllllln sfhelsrael haeallplgp allaalhavl srislpsllg ttlavfsepl
      841 alfyeknklp evpkvysnln nklekllaei lqclqchcpg scdtellqql spvlcvafqh
      901 rskqirqqsa qlwnctfaka ssltypqelk svlsqakkki plllpgfesi evseecsgpf
      961 sdlmensqld akisgmevkv gqkrdsilaq tnepkndgkd ksstlqatpa klklefsspk
     1021 rtsetlleee ksvdfvfipp eakprilteh qkevlrskra dipamynnld asqdttsfsq
     1081 ysqsqedsle mppsvenake dtanqpqeen vgsegchsee spactsegea keesaemipe
     1141 etstgeglet ssveaapqea sagkedtsdv tnssassdii sgtpqpvsrr qsfitlekfg
     1201 aaesrpfspa plssvselpg sapeaatqes ssdskagaka eksgeedknp pkaepaagav
     1261 trrvtrwqsr melqgnkskl qsrsegplas gslegsaels savedvehil lshsqallst
     1321 eadiqkaeda iaemekaqgm dmdskentpp essscseqap gedsqvpqvp pqqkqlrrss
     1381 rrrseamess sgsqekedgl pkrdrrkeee kagqkklsqg kgdgsqkqkg ipgkttdstk
     1441 essqpervae dwsskdsaac rgleeegsrg gsraedapra egegqgslst agqkverpry
     1501 htrrssqgll ssienseads segkeestkk kkpvkvrsrs nslegklkeg qagsqslegs
     1561 aqgnetespl easkgepevg tgaavpaepg glekqeipaa agevvgsgss esagalqdts
     1621 veqskgdasm eslgspcvse qdgraaeqsk qeekqsstgd caanvpgael sslqspecqn
     1681 krskrvkkik scdccfkkpk hqvteskqek apeleepest pgqtpgnvsg qadleeslal
     1741 apcgmstplh ppkepstfsl erqekdvenl qgssvgveee npeppegsaa ettesmeeik
     1801 epaeqkeqte qvlpesvpee prescsdsgd qgeeaaaaek eeinengqle evpeelnvds
     1861 kpeeeemkel egneedkgea ensagetcvv pdqemkeelv eteikvpena aladqsvdsp
     1921 lkvegdpsvq vaesptslqa rctwspsasp stsilkrgvk rsqeddslsp ankirrvsfa
     1981 npifqeglad didrrspvvr shsspssrsl kilsnmqite makeslpcls elvypalagc
     2041 kapvdvilpq itsnicargl gqliraknik tvgdlstlta leiktlpirs pkvsnvkral
     2101 kgyheqqvks rvleestale daekpgndve ekslsgdeek laadladtgs ssssseqpsv
     2161 dlvgqiqala aqlssedlhg ysgrqllemq ekllgmassv trslrarwpc pplqgpe
//
LOCUS       XP_041323251             940 aa            linear   VRT 06-MAY-2021
DEFINITION  pre-mRNA-processing factor 40 homolog A [Pyrgilauda ruficollis].
ACCESSION   XP_041323251
VERSION     XP_041323251.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467317.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..940
                     /product="pre-mRNA-processing factor 40 homolog A"
                     /calculated_mol_wt=106992
     Region          <14..216
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          240..>663
                     /region_name="PRP40"
                     /note="Splicing factor [RNA processing and modification];
                     COG5104"
                     /db_xref="CDD:227435"
     Region          726..780
                     /region_name="FF"
                     /note="Contains two conserved F residues; smart00441"
                     /db_xref="CDD:128718"
     CDS             1..940
                     /gene="PRPF40A"
                     /coded_by="XM_041467317.1:93..2915"
                     /db_xref="GeneID:121353450"
ORIGIN      
        1 msggdstaaa aaaspqplpf slpkppplmq ltpgdavrpv gsgadqspks arlaarpdwp
       61 agkpvsllap llpprgepep llpfgpaapr pplrgrllgr cggsllspam rpggvdrgsl
      121 mmghpgmphy ppmgmhpmgq rppnmppvph gmmpqmmppm ggppmgqmpg mmqsvmpgmm
      181 mshmsqaamq ptvppgvnsm daqvgvtppg tqtthpvvst vqqsstttss aseehskqks
      241 twtehkspdg rtyyyntetk qstwekpddl ktpaeqllsk cpwkeyksds gkpyyynsqt
      301 kesrwakpke ledleamika eenstkpeda aaaasapaad apsgarvfpl kasaaakked
      361 edaqpvkkty twntkeeakq afkellkekr vpsnasweqa mkmiindpry salaklsekk
      421 qafnaykvqt ekeekeears kykeakesfq rflenhekmt sttrykkaeq mfgemevwna
      481 iserdrleiy edvlfflskk ekeqakqlrk rnwealknil dnmanvtyct twseaqqylm
      541 dnptfaedee lqnmdkedal icfeehiral ekeeeeekqk sllrerrrqr knresfqlfl
      601 delhehgqlh smsswmelyp aissdirfts mlgqpgstal dlfkfyvedl karyhdekki
      661 ikdilkdkgf vvevntsfed fvtvisstkr attldagnik lafnslleka earerereke
      721 earkmkrkes afksmlkqat ppieldavwe dirdrfvkep afeditlese rkrifkdflh
      781 vlehecqhhh sktkkhskks kkhhrkrsrs rsgseseddd shskkkrqrs esrsvserss
      841 saesersykk skkhkkkskk rrhksdspes dverekdkke rerdsekera rqrseskhks
      901 ptkkrpgkds gnwdtsgsel segelekqrr tlleqldedq
//
LOCUS       XP_041323252             499 aa            linear   VRT 06-MAY-2021
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 13 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323252
VERSION     XP_041323252.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467318.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..499
                     /product="polypeptide N-acetylgalactosaminyltransferase
                     13"
                     /calculated_mol_wt=56913
     Region          118..361
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(122..124,126,155,185,188,192,208..210,235..236,
                     258..259,261,286,289,294)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(208,210,286)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          368..494
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(386..388,397,399,407..408)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467345"
     Site            order(426..427,435,437,445..446)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467345"
     Site            order(467..469,478,480,487..488)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467345"
     CDS             1..499
                     /gene="GALNT13"
                     /coded_by="XM_041467318.1:824..2323"
                     /db_xref="GeneID:121353451"
ORIGIN      
        1 mrrfgycrvv latsllwvll dvflllyfse cnkcddsker sllpalravi srnqegpgem
       61 gravlipkee qekmkelfki nqfnllasdr ialnrslpdv rldgckskvy peelpntsvv
      121 ivfhneawst llrtihsvle rspprllaei vlvddasere flkaslenyv kklevpvril
      181 rmeqrsglir arlrgaaaak gqvitfldah cectlgwlep llarikedrt ptmagglfsi
      241 drnyfeeigt ydagmdiwgg enlemsfriw qcggsleivt cshvghvfrk atpytfpggt
      301 ghvinknnrr laevwmdefk dffyiispgv vkvdygdvsv rkalrerlgc kpfswylenv
      361 ypdsqiprry yslgeirnve tnqcldnmgr kenekvgffn chgmggnqvf sytadkeirt
      421 ddlcldvsrl ngpvlmlkch hlrgnqlwey daekltlrhl nsnqclaeps eedrlvptmr
      481 dcgggraqqw llrnmtlga
//
LOCUS       XP_041323253             336 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein 43 [Pyrgilauda ruficollis].
ACCESSION   XP_041323253
VERSION     XP_041323253.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467319.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="RNA-binding protein 43"
                     /calculated_mol_wt=38223
     Region          7..81
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..336
                     /gene="RBM43"
                     /coded_by="XM_041467319.1:189..1199"
                     /db_xref="GeneID:121353452"
ORIGIN      
        1 maaggtrtvv vagvpagllq delladilti hfqtsrnngg dveqlayptr rrgvayvtfd
       61 dpevvervlk kdqhllqdkr lprpypltvt rychnaflwv tstlnmavfr dhlvledlve
      121 emrkqspals fgplqrdgqi avqgsfpalq vlreflllka kslseedkre gkshqrprrk
      181 lqehrgaaet rnstrdaqre kqvlvldtdi yhymkcfhpk plqgndvvis gvtdgditrv
      241 ciesagskag avqglrakkm iedysvelqk ilrkerigfk eqsraekqry rqlcerlkar
      301 yprvllipyd thldvvgtsa dvfgfteevk rcsrwe
//
LOCUS       XP_041323254             401 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent L-type calcium channel subunit beta-4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323254
VERSION     XP_041323254.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467320.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="voltage-dependent L-type calcium channel subunit
                     beta-4"
                     /calculated_mol_wt=44171
     Region          16..57
                     /region_name="VGCC_beta4Aa_N"
                     /note="Voltage gated calcium channel subunit beta domain
                     4Aa N terminal; pfam12052"
                     /db_xref="CDD:463445"
     Region          57..124
                     /region_name="SH3_CACNB4"
                     /note="Src Homology 3 domain of Voltage-dependent L-type
                     calcium channel subunit beta4; cd12043"
                     /db_xref="CDD:212976"
     Site            order(67,69,72,83,101..102,118,120..121)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212976"
     Region          184..364
                     /region_name="Guanylate_kin"
                     /note="Guanylate kinase; pfam00625"
                     /db_xref="CDD:395500"
     CDS             1..401
                     /gene="CACNB4"
                     /coded_by="XM_041467320.1:83..1288"
                     /db_xref="GeneID:121353455"
ORIGIN      
        1 mydnlylhgf edseagsads ytsrpsdsdv sleedreair qereqqaaiq lerakskpva
       61 favktnvsyc galdedvpvp staisfdakd flhikekynn dwwigrlvke gceigfipsp
      121 lrleniriqq eqkrgrfhgg kssgnssssl gemvsgtfra tptatakqkq kvtehippyd
      181 vvpsmrpvvl vgpslkgyev tdmmqkalfd flkhrfdgri sitrvtadis lakrsvlnnp
      241 skraiiersn trsslaevqs eierifelar slqlvvldad tinhpaqlik tslapiivhv
      301 kvsspkvlqr liksrgksqs khlnvqlvaa dklaqcppdm fdvildenql edacehlaey
      361 leaywratha sgaapvtpll grslapaala pypaaisglq g
//
LOCUS       XP_041323255             179 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 5A [Pyrgilauda ruficollis].
ACCESSION   XP_041323255
VERSION     XP_041323255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467321.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519763.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="ADP-ribosylation factor-like protein 5A"
                     /calculated_mol_wt=20527
     Region          3..175
                     /region_name="Arl5_Arl8"
                     /note="Arf-like 5 (Arl5) and 8 (Arl8) GTPases; cd04153"
                     /db_xref="CDD:133353"
     Site            23..30
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133353"
     Site            order(25..31,125..126,128,158..159)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133353"
     Site            order(25..26,30,34,46..53,75,80)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133353"
     Site            35..50
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133353"
     Site            order(47..51,56,66,70,76,78..80)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133353"
     Site            47
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133353"
     Site            order(48..55,65,76,79..80)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133353"
     Site            order(51..57,60..65)
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:133353"
     Site            66..83
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133353"
     Site            66..69
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133353"
     Site            125..128
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133353"
     Site            158..160
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133353"
     CDS             1..179
                     /gene="ARL5A"
                     /coded_by="XM_041467321.1:209..748"
                     /db_xref="GeneID:121353456"
ORIGIN      
        1 mgilftriwr lfnhqehkvi ivgldnagkt tilyqfsmne vvhtsptigs nveeivvnnt
       61 rflmwdiggq eslrsswnty ytntefvivv vdstdreris vtkeelykml ahedlkkagl
      121 lifankqdvk ecmtvaeisq flkltsikdh qwhiqaccal tgeglcqgle wmmsrlkir
//
LOCUS       XP_041323257             191 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 154-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323257
VERSION     XP_041323257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467323.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519786.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="zinc finger protein 154-like"
                     /calculated_mol_wt=21864
     Region          43..67
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          58..78
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          70..95
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          86..106
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          98..123
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          114..134
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(119,121,123,125..126,129..130,133,147,149,153..154,
                     157..158,161,175,177,179,181..182,185..186,189)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          123..>190
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          142..162
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          170..190
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..191
                     /gene="LOC121353457"
                     /coded_by="XM_041467323.1:1..576"
                     /db_xref="GeneID:121353457"
ORIGIN      
        1 mnvlnvrrgf rpapissats gftqrrgpsa tltvgrassk ttlvthrrih tgerpyecge
       61 cgmsfsqssn lilhqrihte ekpyqcgecg mtfsrrsylm ihqmshtgek pyecpecqkr
      121 frssshllrh qqihteerpf hcpdcgkgfk ynshlvrhqr ihtgerpcec pqcgkrfsds
      181 ssltrhqrrh g
//
LOCUS       XP_041323258             912 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 33
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323258
VERSION     XP_041323258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467324.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519874.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 33"
                     /calculated_mol_wt=98045
     Region          48..>144
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          186..361
                     /region_name="Reprolysin"
                     /note="Reprolysin (M12B) family zinc metalloprotease;
                     pfam01421"
                     /db_xref="CDD:426256"
     Region          407..472
                     /region_name="DISIN"
                     /note="Homologues of snake disintegrins; smart00050"
                     /db_xref="CDD:214490"
     Region          474..618
                     /region_name="ACR"
                     /note="ADAM Cysteine-Rich Domain; smart00608"
                     /db_xref="CDD:214743"
     Region          631..654
                     /region_name="EGF_2"
                     /note="EGF-like domain; pfam07974"
                     /db_xref="CDD:400365"
     CDS             1..912
                     /gene="ADAM33"
                     /coded_by="XM_041467324.1:20..2758"
                     /db_xref="GeneID:121353461"
ORIGIN      
        1 magpgppgpr rgsakawglh lallgvllgl pprgragpag plshgervtp hwllggrarr
       61 avslqeqvpa paraevavta egkelvlvle rnqllapgyt ethyseqgqp vtvtpnhteh
      121 chyhghvrgh rgswvvlstc sgirwagcag rwalwclega qsqglpplae pcvclqarrd
      181 awrtmkymel fivadhtlyr nqnlnlghtk qriveianyv dkfyrllnik valiglevwt
      241 erdqcsvssd anatlwaflq wkkslrarkk hdnaqlltgk tfggttigma plegmcsadn
      301 sggvsvdhae qpigaaatma heighnfgmv hdaqgccvea tpeqggcvma aatghpfprv
      361 fsscsrspsp calclsfppc rmrramlgwv grgwgrdgtt ahgavlstqe ctnpccnahn
      421 ctlkegaqca hgdcchsckl kvagtlcrea agscdlpeyc tgaspycpan vylldgssca
      481 rgqaycstgm cmthqqqcvq lwgpgawpap dacfqdvnma gntygncgkd sqgryvkcdk
      541 rdamcgkiqc qssakkpqgt ntvsidttir fkgrevkcrg tfvysakddq edlsdpglvl
      601 tgtkcgdgmv ckdrrcqnas lfelekcvsr chghgvcnsn knchcdpgwa ppfcekpglg
      661 gsvdsgpvqs hnhesilial vviflfllpa lalsiyywyr qensllarwi kdtrhrghqa
      721 crkkstgrks ssahpkgaft lrnisasshp peqgprtafl pkagaaqpgs qpvnvvhplr
      781 paphsisprp rdpkparppp patksplvpt kagasqaklp ppkkplpcsp vrspqvvpkh
      841 qaprrplpgs pllakelppa hgqtllvmvp psnfkvsgts gsshptrplk pmppqrpvpa
      901 ikvqstsfss kk
//
LOCUS       XP_041323259            2729 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming acidic coiled-coil-containing protein 2-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323259
VERSION     XP_041323259.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467325.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519874.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..2729
                     /product="transforming acidic coiled-coil-containing
                     protein 2-like"
     Region          291..>690
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          576..>897
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          2004..>2357
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..2729
                     /gene="LOC121353462"
                     /coded_by="XM_041467325.1:<1..8192"
                     /codon_start=3
                     /db_xref="GeneID:121353462"
ORIGIN      
        1 vqesrfspcl plllspglae tflqgsqldf lplrgipdvs gaslehpepp qvhgstslrg
       61 palpspsqpv gqadpgaapr agqrlgsqgd sgdsdsgteq eaaaprgrad pahpapeegl
      121 akgleqpwst agkdghcsgh scghssqdsd gpaagselse gskespgqge ssssssssss
      181 syttaltkfs eksergvqqe kvkvlgsaaa alekgkkvpe lgwsdnfsdg lrrgrakisg
      241 aqdvlcaaas eagrgrlqep gvqprgsqgl paapeelqqa lldhqqpagk lgteglvpag
      301 tpsqpqdtap cpghspepag srdeltgsdc sierghkate ispsfslgge gsfslhlahp
      361 nfqstpgvll kragkaegpa gvlvipsdlq gspscpseea pgkspvpgsp geqhppqsav
      421 eetcgrlesl rlespcpgrv qsfpllglqe qlespcpgrv qslpslglqe kgespcpgrm
      481 qsfpslglqe kgespcpgrv qslpslglqe kgespcpgrm qsfpslglqe kgespcpgrv
      541 qslpslgfle kgespcpgrv qslsslgfle kvgawevgqp lqgpaatssr vpggsppart
      601 acsasprasg cvssaqkspg dpegraapal srsqsdstvd vpssssralp avspaaegtg
      661 eppgqespal gasdsstppk vlpapraegv hsttrrssap dvfvsraaql lqkdrsspae
      721 ehqdceekgn qplslsipsg hdvmdsfgaa lsqcrrekge spcpgrvqsl sslgflekvg
      781 awevgqplqg paatssrvpg gsppartacs asprasgcvs saqkspgdpe graapalsrs
      841 qsdstvdvps sssralpavs paaegtgepp gqespalgas dsstppkvlp apraegvhgt
      901 rrrssapdvf vsraaqlqkd gsspaeehqd ceekgnqpls lsipsghdvm dsfgavsles
      961 lnfpdgpgep qgalvvprpc psaggdspmp pgaaletpkk eelnieerip vylrrlgieq
     1021 spgtllapfv ppaplpelef spwqprslqp plgalawapp paqgallpaf emsqasfdsd
     1081 vsplsvslav gseagseqdq dllsprellg dppssqgsva gpqleqaapg gpargaegsp
     1141 gcsgaqqdlp scssgrgpra ggrgaqgapa epgssssgss qqgwavgalp gagsemeldr
     1201 assssgvgse ssqgqeresl lgpgvlqelr ellaqveglt ascsrpacpt ascrepgesp
     1261 pglagreedp kdsrlgqewi pelqkrlswd eavtprgvwg qglgmpplds ascqlawghp
     1321 lavssqrreg lrgtaqeprp gksagrsepe gcssvttgla qgtarirlst gtapqlghpp
     1381 apeppgtvpa glggsqgswc qagraaaprg sqdsssgdsl sarvwsllre pgrcqqpgsa
     1441 pgavqgsvpa agaarspags ssssrssssr dslaarvrrl lgtagsgapa srilrsaeeq
     1501 eskirawvkl klasqsqecg adwdeetqlr meglkaellp msreptpakd pwlcgleaas
     1561 ehlrkqeqdl ggvqaprcpr drhgqlsrtr ellqpssppa apfpravpwd csllqdmqlk
     1621 pcsaaemkdm qlkpwgaaep wntadlqdvq lkswgtadlq dmqlkpwnta dlqdvqlkpc
     1681 naadlqdvql kpcnaadlqd vqlkpcnvad lqdvqlkpcs vadlqdmqlk pcsaaepchv
     1741 adlqdmqlkp wntadlqdmq lkpwntadlq dmqlkpcnaa dlqdvqlkpw ntadlqdmql
     1801 kpcnaadlqd vqlkpwntad ledmqlkpcs aadlqdmqlk pcsaadlqdm qlkpcsaael
     1861 qvhrqqpavg hpsamaelra plardpcags paaaprahge lgkpgtpitl spqslagllp
     1921 geerlgtepw hralrqgcap cpvlagtgga aeaapapaar aaaaaaqeta pqpggthagk
     1981 rqtlsakqpq llpaavaegh tqgaraggls qetkpsiepp plspsqqeei ppghprlrgg
     2041 segpgaaaqr gllkgpagvt aegrkgpdqp plvpeeavre qmgpahptpa dealsttpea
     2101 psapegrsaa qqpslpsspe apgiaapshk eippfprqpa qplllpykpw gssgmyyvpf
     2161 qkaggsvspg epeastassc sgsedapapg ilarvlrvgh eppparaaaq hrgtghghrp
     2221 klawaeehra pleqsaelpa gswrvepsrg vpeprampag hsccqrrrel srardehpar
     2281 cqraprapqg tegqffalpa eaddsrseep sarasfghga agtglhrgaa gadpgprgpa
     2341 ahlqesggka prqrghaggs ldelwvrflq rqgtqqqlrr ngelslverl drlarllqnp
     2401 irhtlaptaa gekvpqeeiq grerpeigla gkgssgsgge prgarvgqsh gssspgepra
     2461 arpgqkviqh lsrileeqqh lgipsdssse trlsgepssc stsawdtgtg ldtspasgds
     2521 sslslstidt arllrafgqh rlapstdtps pqlsprlspr laqlycaisq qkrrsekwhg
     2581 qsgaagagac pqgaaqslgk hqqsqstipf ssdstcasss swgpssalsh krrtrmlskg
     2641 iqagdleivs satkkntrdv gvtfptprss qqlweplgqg qgtgtgtggs laaapgtagq
     2701 apdrhtdqee qaalpardsm arpsrgpgm
//
LOCUS       XP_041323260            1390 aa            linear   VRT 06-MAY-2021
DEFINITION  attractin [Pyrgilauda ruficollis].
ACCESSION   XP_041323260
VERSION     XP_041323260.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467326.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519874.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1390
                     /product="attractin"
                     /calculated_mol_wt=153799
     Region          65..>97
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(66,76,83,85,94)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          97..212
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(107,109,111,136,141,183,207,209,211..212)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          300..599
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          306..356
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          357..406
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          409..455
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          519..574
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          753..881
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(852,856,858,864,866..869,873..875)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     Region          893..944
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          1023..1068
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1024,1026,1032,1038,1041,1050)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     CDS             1..1390
                     /gene="ATRN"
                     /coded_by="XM_041467326.1:55..4227"
                     /db_xref="GeneID:121353463"
ORIGIN      
        1 mvrvvppppa rpaptrqrpq marrgpgrrg grspappppp llalllllvl gpaaaageev
       61 avskecdkpc anggrcqpgt gqcecqpgwv gdqcqhcggr frltepsgyv tdgpgnykyk
      121 tkctwliegr pntilrlrfn hfatecswdh lyvydgdsiy apllaafsgl ivpekdsnet
      181 vpevvatsgy allhffsdaa ynltgfnity nfnmcpnncs gqgecrlnsr tmapqcecae
      241 rwkgeacdip ycpgncgape rghcslngsr acvcsagwqg pgcsvplpan qsfwtreeyt
      301 lpklarashk avihdnkmwi vggyvfnhsd sqkvlaydli seewlplnss vnsvemrygh
      361 slalhkdniy myggkldatg nvssqlwvfh iprqswavla prakeqyavv ghsahmvtlq
      421 dnstvmlvlf ghcplygyis nvqeynlvtn twsilqtsga lvqggyghss vydpstrsiy
      481 ihggykafsa nkyrladdly kyevdsrmwt ilkdsrffry lhtavivsgt mlvfggnthn
      541 dtsmshgakc fssdfmaydi acdrwsvlpr palhhdvnrf ghsavlynst myvfggfnsl
      601 llsdilkftp erceafgnkt sclgagpgvr cvwaphpprc ipwenatldq qqkvfedcpp
      661 kpavdsekcd qitdcyscta ntnscqwcsd qcipahnnct eeqvpvtlyd ncpkdnpayy
      721 cnkktscksc amdqncqwep rnqecialpe nicgtnwhlv gnsclkitna kenydhakls
      781 crsngallas lttqkkvefv lkelqkiqss pktltpwvgl rkinvsywcw edmspftntl
      841 vqwlpdepsd agfcgylaep sqqglkaatc inevngsvce rpanhsakqc rtpcalraac
      901 aectsgssec mwcsnmqqcv dsnayvasfp ygqcmewytm sscppencsg yctcaqcleq
      961 pgcgwctdps ntgkgkcleg syrgpvrmpt pstpgkhsle pvlnvsmcpv ensynwsfiq
     1021 cpacqcnghs rcvnesicek cenlttgrhc etcisgyygd ptnggtcqpc kcnghasvcn
     1081 tntgkcfctt kgikgdecql cevenryqgn plkgtcyytl lidyqftfsl sqeddryyta
     1141 infvatpeeq nrdldmfina sknfnlnitw stsfatgtqa geeipvvsrt nikeykdsfs
     1201 nekfdfrnnp nitffvyvsn ftwpikiqia fsqhsnfmdl vqffvtffsc flslllvaav
     1261 vwkikqscwa srrreqllre mqqmasrpfa sinvaletde eppdliggsi ktvpkpiale
     1321 pcfgnkaavl svfvrlprgl ggipppgqsg lavasalvdi sqqmpiayke ksgairnrkq
     1381 qppaqpgtci
//
LOCUS       XP_041323261             429 aa            linear   VRT 06-MAY-2021
DEFINITION  GDNF family receptor alpha-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323261
VERSION     XP_041323261.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467327.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519874.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..429
                     /product="GDNF family receptor alpha-4"
                     /calculated_mol_wt=47189
     Region          26..104
                     /region_name="GDNF"
                     /note="GDNF/GAS1 domain; smart00907"
                     /db_xref="CDD:197975"
     Region          145..225
                     /region_name="GDNF"
                     /note="GDNF/GAS1 domain; pfam02351"
                     /db_xref="CDD:460537"
     Region          235..329
                     /region_name="GDNF"
                     /note="GDNF/GAS1 domain; pfam02351"
                     /db_xref="CDD:460537"
     CDS             1..429
                     /gene="LOC121353464"
                     /coded_by="XM_041467327.1:82..1371"
                     /db_xref="GeneID:121353464"
ORIGIN      
        1 mrgvlcfctl illegmaaav gasrdclqag eacttdpvcs akfrtlrqci agnganklgp
       61 daksqcrstv sallssqlyg ckckrgmkke khclsvywsi hhtlmegmnv lesspyepfi
      121 rgfdyvrlas itagsenevt qvnrcldaak acnvdemcqr lrteyvsfci rrlaradtcn
      181 rskchkalrk ffdrvppeyt hellfcpced tacaerrrqt ivpacsyesk dkpnclapld
      241 scrdnyvcrs ryaefqfncq pspqaasgcr rdsyaaclla ytgiigspit pnyidnstss
      301 iapwctcnas gnrqdecesf lhlftnnicl qnaiqafgng thlntavaps ippttqmykq
      361 ernanravat lrenslehlq ptkvageerl lrgstrlssg tcspatppcw aasllqmwll
      421 lapavlslp
//
LOCUS       XP_041323262             235 aa            linear   VRT 06-MAY-2021
DEFINITION  SH3 domain-containing protein C23A1.17-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323262
VERSION     XP_041323262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467328.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519908.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>235
                     /product="SH3 domain-containing protein C23A1.17-like"
     CDS             1..235
                     /gene="LOC121353466"
                     /coded_by="XM_041467328.1:1..>706"
                     /db_xref="GeneID:121353466"
ORIGIN      
        1 mgtlgplwtp sgdtgtplvp lvplgdtpvt lrcplvtlwc pwgpsgatpc rhcpaggsgv
       61 pcpgvplplp agtalpagpw glspasalga aaavaaatge ppvalgdscg agpgggvavv
      121 avppplvspp aaggrdttmy fctvpvtava plvaaplaal gtagdtslts gctlgtvvvt
      181 gevavgagdv lsvitwghrh chlpitkwpq cpplspslpp pdvpnapypl savps
//
LOCUS       XP_041323263              81 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein C1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323263
VERSION     XP_041323263.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467329.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519925.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>81
                     /product="forkhead box protein C1-like"
     CDS             1..81
                     /gene="LOC121353467"
                     /coded_by="XM_041467329.1:<1..>243"
                     /db_xref="GeneID:121353467"
ORIGIN      
        1 epeggpaggs aapppppvri qdiktengta sppqavsppg aapplgavpk iespdssssl
       61 ssggsprstl pssrslslea p
//
LOCUS       XP_041323264             192 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor tyrosine-protein kinase erbB-3-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323264
VERSION     XP_041323264.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467330.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519952.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>192
                     /product="receptor tyrosine-protein kinase erbB-3-like"
     Region          <6..97
                     /region_name="GF_recep_IV"
                     /note="Growth factor receptor domain IV; pfam14843"
                     /db_xref="CDD:464344"
     Region          105..143
                     /region_name="TM_ErbB3"
                     /note="Transmembrane domain of ErbB3, a Protein Tyrosine
                     Kinase; cd12095"
                     /db_xref="CDD:213056"
     Site            order(108,112,115..116,119..120,122..123,126,130..131,134)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:213056"
     Region          168..>192
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..192
                     /gene="LOC121353469"
                     /coded_by="XM_041467330.1:1..>576"
                     /db_xref="GeneID:121353469"
ORIGIN      
        1 mggprdpref sqggectech peceridgga tcngsgadtc trcahyrdgp hcvercpdgv
       61 lgergpiykf pdgsrecrpc hencsrgcvg pllrdclgdt lpvsrrtptl iavmvvgavf
      121 lscslvllal lywrgkkiqk kramrryler geslepldps ekankvlari fkeselkrlk
      181 vlgsgvfgtv hk
//
LOCUS       XP_041323266             286 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin alpha-1B chain-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323266
VERSION     XP_041323266.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467332.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519963.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>286
                     /product="tubulin alpha-1B chain-like"
     Region          1..>286
                     /region_name="PLN00221"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:177802"
     CDS             1..286
                     /gene="LOC121353470"
                     /coded_by="XM_041467332.1:<1..>858"
                     /db_xref="GeneID:121353470"
ORIGIN      
        1 recisihvgq agvqignacw elyclehgiq pdgqmpsdkt igggddsfnt ffsetgagkh
       61 vpravfvdle ptvidevrtg tyrqlfhpeq litgkedaan nyarghytig keiidlvldr
      121 irkladqctg lqgflvfhsf gggtgsgfts llmerlsvdy gkksklefsi ypapqvstav
      181 vepynsiltt httlehsdca fmvdneaiyd icrrnldier ptytnlnrli sqivssitas
      241 lrfdgalnvd ltefqtnlvp yprihfplat yapvisaeka yheqls
//
LOCUS       XP_041323267             569 aa            linear   VRT 06-MAY-2021
DEFINITION  PWWP domain-containing protein 2B [Pyrgilauda ruficollis].
ACCESSION   XP_041323267
VERSION     XP_041323267.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467333.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="PWWP domain-containing protein 2B"
                     /calculated_mol_wt=63328
     Region          454..569
                     /region_name="PWWP_PWWP2B"
                     /note="PWWP domain found in PWWP domain-containing protein
                     2B (PWWP2B); cd20153"
                     /db_xref="CDD:438981"
     Site            order(480,483,509)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438981"
     Site            481..484
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438981"
     CDS             1..569
                     /gene="PWWP2B"
                     /coded_by="XM_041467333.1:66..1775"
                     /db_xref="GeneID:121353471"
ORIGIN      
        1 mvndtlvvtl scgerrftgv lldcskrsgl fclpssfpkh edppagacad gaadggvaaq
       61 gepeprpagh rpaeggaeeq vppllpapgs lppfppyfeg apfprplwlr htynqwvpqp
      121 pprtikrtrr rlsrnrdpgr limstirlrp rqvlcekckn tlnpedanap rqnaktrrkl
      181 siqdkeqkkh sdsdyvekrn krekreddkf sgelvhrtpv ikisystpqg kgevvkipsr
      241 vhgsvkpfcp eqalqngagd qeesrdserc rqtkclmdks agsqlasipk lkltrpvhss
      301 vdvpppkirl kphrindgqs vsiykaelid einvlqnsge snpevfynde stdrslaeis
      361 sgssgedddf krfpqgkdgh dnlaflmnyr krkadsssls vcsndsldes kssssevtsp
      421 elcdflpgdd asvsssskde rkivppltvr lhtqsvskcv tedgrtvsvg divwgkihgf
      481 pwwparvldi nlsqkengep swreakvswf gspttsflsv sklspfseff klrfnrkkkg
      541 myrkaiteaa kavkhltpei rdlltqfet
//
LOCUS       XP_041323268             802 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323268
VERSION     XP_041323268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X1"
                     /calculated_mol_wt=87746
     Region          69..800
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..802
                     /gene="ALDH18A1"
                     /coded_by="XM_041467334.1:269..2677"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlcraalspl vrspgwcfvs pphaiaaisr lylpchnqrl rnesircwsn ipfitvplsr
       61 ahgksfahrs elkhakrivv klgsavvtrg decglalgrl asiveqvsml qnqgremmiv
      121 tsgavafgkq rlrheillsq svrqalhsgq sqlkdmaipv learacaaag qsglmalyea
      181 mftqysicaa qilvtnldfh deqkrrnlng tlhellrmni vpiintndav vpppepnsdl
      241 qgvnvisvkd ndslaarlav emktdllivl sdveglfdsp pgsddaklid ifypgdqqsv
      301 tfgtksrvgm ggmeakvkaa lwalqggtsv viangthpki sghvitdive gkkvgtffse
      361 vkpagptveq qaemaraggr tlaalqpeqr aeiiyrladl ltdqreeilm ankkdleeae
      421 nkgrlalpll krlslstskl nslaiglrqi aassqdsvgr virrtriakd ldleqvtvpi
      481 gvllvifesr pdclpqvsal aiasgnglll kggkeaahsn qilhhltqea lsihgvrdav
      541 qlvntreeve dlcrldklid liiprgssql vrniqkaakg ipvmghsegi chvyvdmdas
      601 vekvtriird skceypaacn aletllihrd llrtplfdqi idmlrveqvk ihagpkfasy
      661 ltfspsevks lrteygdlec cievvdsvqe avehihkygs shtdviiten ektgefflqh
      721 vdsacvfwna strfsdgyrf glgaevgist srihargpvg iegllttkwl lrgdnhvvsd
      781 fsehgsmkyl heslplpqrn an
//
LOCUS       XP_041323269             802 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323269
VERSION     XP_041323269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X1"
                     /calculated_mol_wt=87746
     Region          69..800
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..802
                     /gene="ALDH18A1"
                     /coded_by="XM_041467335.1:128..2536"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlcraalspl vrspgwcfvs pphaiaaisr lylpchnqrl rnesircwsn ipfitvplsr
       61 ahgksfahrs elkhakrivv klgsavvtrg decglalgrl asiveqvsml qnqgremmiv
      121 tsgavafgkq rlrheillsq svrqalhsgq sqlkdmaipv learacaaag qsglmalyea
      181 mftqysicaa qilvtnldfh deqkrrnlng tlhellrmni vpiintndav vpppepnsdl
      241 qgvnvisvkd ndslaarlav emktdllivl sdveglfdsp pgsddaklid ifypgdqqsv
      301 tfgtksrvgm ggmeakvkaa lwalqggtsv viangthpki sghvitdive gkkvgtffse
      361 vkpagptveq qaemaraggr tlaalqpeqr aeiiyrladl ltdqreeilm ankkdleeae
      421 nkgrlalpll krlslstskl nslaiglrqi aassqdsvgr virrtriakd ldleqvtvpi
      481 gvllvifesr pdclpqvsal aiasgnglll kggkeaahsn qilhhltqea lsihgvrdav
      541 qlvntreeve dlcrldklid liiprgssql vrniqkaakg ipvmghsegi chvyvdmdas
      601 vekvtriird skceypaacn aletllihrd llrtplfdqi idmlrveqvk ihagpkfasy
      661 ltfspsevks lrteygdlec cievvdsvqe avehihkygs shtdviiten ektgefflqh
      721 vdsacvfwna strfsdgyrf glgaevgist srihargpvg iegllttkwl lrgdnhvvsd
      781 fsehgsmkyl heslplpqrn an
//
LOCUS       XP_041323270             802 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323270
VERSION     XP_041323270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X1"
                     /calculated_mol_wt=87746
     Region          69..800
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..802
                     /gene="ALDH18A1"
                     /coded_by="XM_041467336.1:79..2487"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlcraalspl vrspgwcfvs pphaiaaisr lylpchnqrl rnesircwsn ipfitvplsr
       61 ahgksfahrs elkhakrivv klgsavvtrg decglalgrl asiveqvsml qnqgremmiv
      121 tsgavafgkq rlrheillsq svrqalhsgq sqlkdmaipv learacaaag qsglmalyea
      181 mftqysicaa qilvtnldfh deqkrrnlng tlhellrmni vpiintndav vpppepnsdl
      241 qgvnvisvkd ndslaarlav emktdllivl sdveglfdsp pgsddaklid ifypgdqqsv
      301 tfgtksrvgm ggmeakvkaa lwalqggtsv viangthpki sghvitdive gkkvgtffse
      361 vkpagptveq qaemaraggr tlaalqpeqr aeiiyrladl ltdqreeilm ankkdleeae
      421 nkgrlalpll krlslstskl nslaiglrqi aassqdsvgr virrtriakd ldleqvtvpi
      481 gvllvifesr pdclpqvsal aiasgnglll kggkeaahsn qilhhltqea lsihgvrdav
      541 qlvntreeve dlcrldklid liiprgssql vrniqkaakg ipvmghsegi chvyvdmdas
      601 vekvtriird skceypaacn aletllihrd llrtplfdqi idmlrveqvk ihagpkfasy
      661 ltfspsevks lrteygdlec cievvdsvqe avehihkygs shtdviiten ektgefflqh
      721 vdsacvfwna strfsdgyrf glgaevgist srihargpvg iegllttkwl lrgdnhvvsd
      781 fsehgsmkyl heslplpqrn an
//
LOCUS       XP_041323271             802 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323271
VERSION     XP_041323271.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467337.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X1"
                     /calculated_mol_wt=87746
     Region          69..800
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..802
                     /gene="ALDH18A1"
                     /coded_by="XM_041467337.1:73..2481"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlcraalspl vrspgwcfvs pphaiaaisr lylpchnqrl rnesircwsn ipfitvplsr
       61 ahgksfahrs elkhakrivv klgsavvtrg decglalgrl asiveqvsml qnqgremmiv
      121 tsgavafgkq rlrheillsq svrqalhsgq sqlkdmaipv learacaaag qsglmalyea
      181 mftqysicaa qilvtnldfh deqkrrnlng tlhellrmni vpiintndav vpppepnsdl
      241 qgvnvisvkd ndslaarlav emktdllivl sdveglfdsp pgsddaklid ifypgdqqsv
      301 tfgtksrvgm ggmeakvkaa lwalqggtsv viangthpki sghvitdive gkkvgtffse
      361 vkpagptveq qaemaraggr tlaalqpeqr aeiiyrladl ltdqreeilm ankkdleeae
      421 nkgrlalpll krlslstskl nslaiglrqi aassqdsvgr virrtriakd ldleqvtvpi
      481 gvllvifesr pdclpqvsal aiasgnglll kggkeaahsn qilhhltqea lsihgvrdav
      541 qlvntreeve dlcrldklid liiprgssql vrniqkaakg ipvmghsegi chvyvdmdas
      601 vekvtriird skceypaacn aletllihrd llrtplfdqi idmlrveqvk ihagpkfasy
      661 ltfspsevks lrteygdlec cievvdsvqe avehihkygs shtdviiten ektgefflqh
      721 vdsacvfwna strfsdgyrf glgaevgist srihargpvg iegllttkwl lrgdnhvvsd
      781 fsehgsmkyl heslplpqrn an
//
LOCUS       XP_041323272             802 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323272
VERSION     XP_041323272.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467338.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X1"
                     /calculated_mol_wt=87746
     Region          69..800
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..802
                     /gene="ALDH18A1"
                     /coded_by="XM_041467338.1:252..2660"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlcraalspl vrspgwcfvs pphaiaaisr lylpchnqrl rnesircwsn ipfitvplsr
       61 ahgksfahrs elkhakrivv klgsavvtrg decglalgrl asiveqvsml qnqgremmiv
      121 tsgavafgkq rlrheillsq svrqalhsgq sqlkdmaipv learacaaag qsglmalyea
      181 mftqysicaa qilvtnldfh deqkrrnlng tlhellrmni vpiintndav vpppepnsdl
      241 qgvnvisvkd ndslaarlav emktdllivl sdveglfdsp pgsddaklid ifypgdqqsv
      301 tfgtksrvgm ggmeakvkaa lwalqggtsv viangthpki sghvitdive gkkvgtffse
      361 vkpagptveq qaemaraggr tlaalqpeqr aeiiyrladl ltdqreeilm ankkdleeae
      421 nkgrlalpll krlslstskl nslaiglrqi aassqdsvgr virrtriakd ldleqvtvpi
      481 gvllvifesr pdclpqvsal aiasgnglll kggkeaahsn qilhhltqea lsihgvrdav
      541 qlvntreeve dlcrldklid liiprgssql vrniqkaakg ipvmghsegi chvyvdmdas
      601 vekvtriird skceypaacn aletllihrd llrtplfdqi idmlrveqvk ihagpkfasy
      661 ltfspsevks lrteygdlec cievvdsvqe avehihkygs shtdviiten ektgefflqh
      721 vdsacvfwna strfsdgyrf glgaevgist srihargpvg iegllttkwl lrgdnhvvsd
      781 fsehgsmkyl heslplpqrn an
//
LOCUS       XP_041323273             800 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323273
VERSION     XP_041323273.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467339.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..800
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X2"
                     /calculated_mol_wt=87533
     Region          69..798
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..800
                     /gene="ALDH18A1"
                     /coded_by="XM_041467339.1:269..2671"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlcraalspl vrspgwcfvs pphaiaaisr lylpchnqrl rnesircwsn ipfitvplsr
       61 ahgksfahrs elkhakrivv klgsavvtrg decglalgrl asiveqvsml qnqgremmiv
      121 tsgavafgkq rlrheillsq svrqalhsgq sqlkdmaipv learacaaag qsglmalyea
      181 mftqysicaa qilvtnldfh deqkrrnlng tlhellrmni vpiintndav vpppepnsdl
      241 qgvisvkdnd slaarlavem ktdllivlsd veglfdsppg sddaklidif ypgdqqsvtf
      301 gtksrvgmgg meakvkaalw alqggtsvvi angthpkisg hvitdivegk kvgtffsevk
      361 pagptveqqa emaraggrtl aalqpeqrae iiyrladllt dqreeilman kkdleeaenk
      421 grlalpllkr lslstsklns laiglrqiaa ssqdsvgrvi rrtriakdld leqvtvpigv
      481 llvifesrpd clpqvsalai asgnglllkg gkeaahsnqi lhhltqeals ihgvrdavql
      541 vntreevedl crldklidli iprgssqlvr niqkaakgip vmghsegich vyvdmdasve
      601 kvtriirdsk ceypaacnal etllihrdll rtplfdqiid mlrveqvkih agpkfasylt
      661 fspsevkslr teygdlecci evvdsvqeav ehihkygssh tdviitenek tgefflqhvd
      721 sacvfwnast rfsdgyrfgl gaevgistsr ihargpvgie gllttkwllr gdnhvvsdfs
      781 ehgsmkylhe slplpqrnan
//
LOCUS       XP_041323274             696 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323274
VERSION     XP_041323274.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467340.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..696
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X3"
                     /calculated_mol_wt=75707
     Region          69..694
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..696
                     /gene="ALDH18A1"
                     /coded_by="XM_041467340.1:270..2360"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlcraalspl vrspgwcfvs pphaiaaisr lylpchnqrl rnesircwsn ipfitvplsr
       61 ahgksfahrs elkhakrivv klgsavvtrg decglalgrl asiveqvsml qnqgremmiv
      121 tsgavafgkq rlrheillsq svrqalhsgq sqlkdmaipv learacaaag qsglmalyea
      181 mftqysicaa qilvtnldfh deqkrrnlng tlhellrmni vpiintndav vpppepnsdl
      241 qgvnvisvkd ndslaarlav emktdllivl sdveglfdsp pgsddaklid ifypgdqqsv
      301 tfgtksrvgm ggmeakvkaa lwalqggtsv viangthpki sghvitdive gkkvgtffse
      361 vkpagptveq qaemaraggr tlaalqpeqr aeiiyrladl ltdqreeilm ankkdleeae
      421 nkgrlalpll krlslstskl nslaiglrqi aassqdsvgr virrtriakd ldleqvtvpi
      481 gvllvifesr pdclpqvsal aiasgnglll kggkeaahsn qilhhltqea lsihgvrdav
      541 qlvkihagpk fasyltfsps evkslrteyg dleccievvd svqeavehih kygsshtdvi
      601 itenektgef flqhvdsacv fwnastrfsd gyrfglgaev gistsrihar gpvgiegllt
      661 tkwllrgdnh vvsdfsehgs mkylheslpl pqrnan
//
LOCUS       XP_041323275             694 aa            linear   VRT 06-MAY-2021
DEFINITION  delta-1-pyrroline-5-carboxylate synthase isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323275
VERSION     XP_041323275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="delta-1-pyrroline-5-carboxylate synthase isoform
                     X4"
                     /calculated_mol_wt=75882
     Region          2..692
                     /region_name="P5CS"
                     /note="delta l-pyrroline-5-carboxylate synthetase;
                     TIGR01092"
                     /db_xref="CDD:130164"
     CDS             1..694
                     /gene="ALDH18A1"
                     /coded_by="XM_041467341.1:470..2554"
                     /db_xref="GeneID:121353472"
ORIGIN      
        1 mlqnqgremm ivtsgavafg kqrlrheill sqsvrqalhs gqsqlkdmai pvlearacaa
       61 agqsglmaly eamftqysic aaqilvtnld fhdeqkrrnl ngtlhellrm nivpiintnd
      121 avvpppepns dlqgvnvisv kdndslaarl avemktdlli vlsdveglfd sppgsddakl
      181 idifypgdqq svtfgtksrv gmggmeakvk aalwalqggt svviangthp kisghvitdi
      241 vegkkvgtff sevkpagptv eqqaemarag grtlaalqpe qraeiiyrla dlltdqreei
      301 lmankkdlee aenkgrlalp llkrlslsts klnslaiglr qiaassqdsv grvirrtria
      361 kdldleqvtv pigvllvife srpdclpqvs alaiasgngl llkggkeaah snqilhhltq
      421 ealsihgvrd avqlvntree vedlcrldkl idliiprgss qlvrniqkaa kgipvmghse
      481 gichvyvdmd asvekvtrii rdskceypaa cnaletllih rdllrtplfd qiidmlrveq
      541 vkihagpkfa syltfspsev kslrteygdl eccievvdsv qeavehihky gsshtdviit
      601 enektgeffl qhvdsacvfw nastrfsdgy rfglgaevgi stsrihargp vgiegllttk
      661 wllrgdnhvv sdfsehgsmk ylheslplpq rnan
//
LOCUS       XP_041323276             517 aa            linear   VRT 06-MAY-2021
DEFINITION  tectonic-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323276
VERSION     XP_041323276.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467342.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="tectonic-3 isoform X1"
                     /calculated_mol_wt=56888
     Region          36..299
                     /region_name="TCTN_DUF1619"
                     /note="Tectonic domain DUF1619; pfam07773"
                     /db_xref="CDD:462260"
     CDS             1..517
                     /gene="TCTN3"
                     /coded_by="XM_041467342.1:27..1580"
                     /db_xref="GeneID:121353474"
ORIGIN      
        1 mrgsrvvlpl slllslslll lslpalspag asqrsggsrs vslvcveesl ifrsntpyst
       61 diisdhggrd plfcvqlddt klnyfqqpqd ikesdfvesl ekygrhsfla psqiqpsfsa
      121 fyragdpili yydsssvlsm lrqpikmgas glcvdgnpag fldtkttsct rifanlsksc
      181 mtdpaldaas yyhdftvlkv pindtvmpsm kvnvtavspp gaphmkddtc tnvvseviye
      241 ieysgtsgiq svsvqfkvsn isvnsgsslq qrftmhfwtr tlshmlprsg npgyntgapl
      301 viansgamqh msilrsesdg scsqflrhtv qfgrnmrtgc kislsptled sncsyiqqkl
      361 ykafqgmnrt eafaitgsah snqaeelmti liqncsvqav nctsccmvpv tleiqilwtk
      421 vgllsnpqaq vlgtrhfyqc qplkflnmsm vpvttvvtft dmtdwpeppq gqpqmhwklp
      481 fdiffpfkva lnvertcrgd lagylllili mssifcf
//
LOCUS       XP_041323277             465 aa            linear   VRT 06-MAY-2021
DEFINITION  tectonic-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323277
VERSION     XP_041323277.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467343.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="tectonic-3 isoform X2"
                     /calculated_mol_wt=51591
     Region          2..239
                     /region_name="TCTN_DUF1619"
                     /note="Tectonic domain DUF1619; pfam07773"
                     /db_xref="CDD:462260"
     CDS             1..465
                     /gene="TCTN3"
                     /coded_by="XM_041467343.1:142..1539"
                     /db_xref="GeneID:121353474"
ORIGIN      
        1 mnlglitkgk gkdyytiika klnyfqqpqd ikesdfvesl ekygrhsfla psqiqpsfsa
       61 fyragdpili yydsssvlsm lrqpikmgas glcvdgnpag fldtkttsct rifanlsksc
      121 mtdpaldaas yyhdftvlkv pindtvmpsm kvnvtavspp gaphmkddtc tnvvseviye
      181 ieysgtsgiq svsvqfkvsn isvnsgsslq qrftmhfwtr tlshmlprsg npgyntgapl
      241 viansgamqh vsffcfcqms ilrsesdgsc sqflrhtvqf grnmrtgcki slsptledsn
      301 csyiqqklyk afqgmnrtea faitgsahsn qaeelmtili qncsvqavnc tsccmvpvtl
      361 eiqilwtkvg llsnpqaqvl gtrhfyqcqp lkflnmsmvp vttvvtftdm tdwpeppqgq
      421 pqmhwklpfd iffpfkvaln vertcrgdla gylllilims sifcf
//
LOCUS       XP_041323278             465 aa            linear   VRT 06-MAY-2021
DEFINITION  tectonic-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323278
VERSION     XP_041323278.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467344.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="tectonic-3 isoform X2"
                     /calculated_mol_wt=51591
     Region          2..239
                     /region_name="TCTN_DUF1619"
                     /note="Tectonic domain DUF1619; pfam07773"
                     /db_xref="CDD:462260"
     CDS             1..465
                     /gene="TCTN3"
                     /coded_by="XM_041467344.1:193..1590"
                     /db_xref="GeneID:121353474"
ORIGIN      
        1 mnlglitkgk gkdyytiika klnyfqqpqd ikesdfvesl ekygrhsfla psqiqpsfsa
       61 fyragdpili yydsssvlsm lrqpikmgas glcvdgnpag fldtkttsct rifanlsksc
      121 mtdpaldaas yyhdftvlkv pindtvmpsm kvnvtavspp gaphmkddtc tnvvseviye
      181 ieysgtsgiq svsvqfkvsn isvnsgsslq qrftmhfwtr tlshmlprsg npgyntgapl
      241 viansgamqh vsffcfcqms ilrsesdgsc sqflrhtvqf grnmrtgcki slsptledsn
      301 csyiqqklyk afqgmnrtea faitgsahsn qaeelmtili qncsvqavnc tsccmvpvtl
      361 eiqilwtkvg llsnpqaqvl gtrhfyqcqp lkflnmsmvp vttvvtftdm tdwpeppqgq
      421 pqmhwklpfd iffpfkvaln vertcrgdla gylllilims sifcf
//
LOCUS       XP_041323280             935 aa            linear   VRT 06-MAY-2021
DEFINITION  mutS protein homolog 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323280
VERSION     XP_041323280.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467346.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..935
                     /product="mutS protein homolog 4"
                     /calculated_mol_wt=103479
     Region          158..910
                     /region_name="MutS"
                     /note="DNA mismatch repair ATPase MutS [Replication,
                     recombination and repair]; COG0249"
                     /db_xref="CDD:440019"
     CDS             1..935
                     /gene="MSH4"
                     /coded_by="XM_041467346.1:20..2827"
                     /db_xref="GeneID:121353475"
ORIGIN      
        1 magaggrata saasesytgr gsstpgvggr vehtprytlg llqtpqsses iggsssggvr
       61 rggssgegla agraarngav kpavserees yfgdksscvd antlnltsss slqglnstci
      121 gktplssgrs gcrshtplmg hsvtsssavs ahtvasviva vvegrglarg evgmasidlk
      181 npemilsqfa dnttyakvit klkiltplei imsntacdag nttklfnlit dhfknvtftt
      241 vqrkyfnetk gleyieqlca sefstifmev qskyyclaaa aallkyvefi qnsvyapksl
      301 kvrfqgsekt amidsssaqn lelvinnrds rnghtllgvl nytktpggsr rlrsnilepl
      361 vdaetintrl dcvqellqde elffglqavi skfldteqll svlvqipkqd tvktaeskit
      421 nliylkhtle lveplkaalr ncntqllkay ynsledtrfg iilekitsvi nddtrytkgc
      481 lsmrtqkcya vkpninefld iarrtyteiv ddiagmitql aekyslpmkt sfssargffi
      541 qmnadcstlp ngqlpseftk itkmkntysf tsadlikmne rcqeslreiy hmtylivckl
      601 lneiyehihc lyklsdivsm ldmllsfaha ctlsdyvrpe ftdtlaikqg whpilekiav
      661 ekpvsnntyl tegnnfiiit gpnmsgksty lkqialcqim aqigsyvpae ycsfriaeqi
      721 ftrigmdddi etnastfmqe mkeityiiqn andksliiid elgrgtsaee gigicyaace
      781 yllnlkaftl fathflelch idalypnven yhfevqhvrs sagnkekiay tytlskgyte
      841 eknyglkaae msslpssiil dakeitchia kqilhrqkst pemmkqraay qlamrlvqta
      901 rnsrldpdsl rvylkalkkk yeascltprk ndeqq
//
LOCUS       XP_041323281             364 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-5-phosphatase A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323281
VERSION     XP_041323281.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467347.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..364
                     /product="inositol polyphosphate-5-phosphatase A isoform
                     X1"
                     /calculated_mol_wt=42306
     Region          1..346
                     /region_name="INPP5A"
                     /note="Type I inositol polyphosphate 5-phosphatase I;
                     cd09092"
                     /db_xref="CDD:197326"
     Site            order(7,115..116,136,139..140,184,186,188,279..280,295,
                     301,336..337)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197326"
     Site            order(7,136,184,186,301,336..337)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197326"
     Site            order(7,115..116,136,139..140,188,279..280,295,336)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197326"
     Site            order(7,336)
                     /site_type="other"
                     /note="putative Mg binding site [ion binding]"
                     /db_xref="CDD:197326"
     Site            order(136,186,337)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197326"
     CDS             1..364
                     /gene="INPP5A"
                     /coded_by="XM_041467347.1:64..1158"
                     /db_xref="GeneID:121353476"
ORIGIN      
        1 malhcqefgg knyeasmshv dkfvkellss damkdynrar vyldenyksq ehftalgsfy
       61 flheslkniy qfdfkakkyk kvtgkeiysd tlestpmlek ekfpqdyfpe ckwsrkgfir
      121 trwcitdcaf dlvnihlfhd asnliawets psvysgirhk algyvldrii dqrfekvsyf
      181 vfgdfnfrld akavvetlca katmqtiraa dtnevvklif resdndrkvm lqlekklfdy
      241 fnqdvfrdnn gtallefdre lsvfkdrlye ldisfppsyp ysedssqgrq ymntrcpawc
      301 drilmshsak elilksende kiviydhigp nvcmgdhkpv flsfriaaga gkpianvhkc
      361 cvvq
//
LOCUS       XP_041323282             364 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-5-phosphatase A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323282
VERSION     XP_041323282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..364
                     /product="inositol polyphosphate-5-phosphatase A isoform
                     X1"
                     /calculated_mol_wt=42306
     Region          1..346
                     /region_name="INPP5A"
                     /note="Type I inositol polyphosphate 5-phosphatase I;
                     cd09092"
                     /db_xref="CDD:197326"
     Site            order(7,115..116,136,139..140,184,186,188,279..280,295,
                     301,336..337)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197326"
     Site            order(7,136,184,186,301,336..337)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197326"
     Site            order(7,115..116,136,139..140,188,279..280,295,336)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197326"
     Site            order(7,336)
                     /site_type="other"
                     /note="putative Mg binding site [ion binding]"
                     /db_xref="CDD:197326"
     Site            order(136,186,337)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197326"
     CDS             1..364
                     /gene="INPP5A"
                     /coded_by="XM_041467348.1:64..1158"
                     /db_xref="GeneID:121353476"
ORIGIN      
        1 malhcqefgg knyeasmshv dkfvkellss damkdynrar vyldenyksq ehftalgsfy
       61 flheslkniy qfdfkakkyk kvtgkeiysd tlestpmlek ekfpqdyfpe ckwsrkgfir
      121 trwcitdcaf dlvnihlfhd asnliawets psvysgirhk algyvldrii dqrfekvsyf
      181 vfgdfnfrld akavvetlca katmqtiraa dtnevvklif resdndrkvm lqlekklfdy
      241 fnqdvfrdnn gtallefdre lsvfkdrlye ldisfppsyp ysedssqgrq ymntrcpawc
      301 drilmshsak elilksende kiviydhigp nvcmgdhkpv flsfriaaga gkpianvhkc
      361 cvvq
//
LOCUS       XP_041323283             409 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-5-phosphatase A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323283
VERSION     XP_041323283.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467349.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="inositol polyphosphate-5-phosphatase A isoform
                     X2"
                     /calculated_mol_wt=47626
     Region          1..338
                     /region_name="INPP5A"
                     /note="Type I inositol polyphosphate 5-phosphatase I;
                     cd09092"
                     /db_xref="CDD:197326"
     Site            order(7,115..116,136,139..140,184,186,188,279..280,295,
                     301,336..337)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197326"
     Site            order(7,136,184,186,301,336..337)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197326"
     Site            order(7,115..116,136,139..140,188,279..280,295,336)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197326"
     Site            order(7,336)
                     /site_type="other"
                     /note="putative Mg binding site [ion binding]"
                     /db_xref="CDD:197326"
     Site            order(136,186,337)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197326"
     CDS             1..409
                     /gene="INPP5A"
                     /coded_by="XM_041467349.1:67..1296"
                     /db_xref="GeneID:121353476"
ORIGIN      
        1 malhcqefgg knyeasmshv dkfvkellss damkdynrar vyldenyksq ehftalgsfy
       61 flheslkniy qfdfkakkyk kvtgkeiysd tlestpmlek ekfpqdyfpe ckwsrkgfir
      121 trwcitdcaf dlvnihlfhd asnliawets psvysgirhk algyvldrii dqrfekvsyf
      181 vfgdfnfrld akavvetlca katmqtiraa dtnevvklif resdndrkvm lqlekklfdy
      241 fnqdvfrdnn gtallefdre lsvfkdrlye ldisfppsyp ysedssqgrq ymntrcpawc
      301 drilmshsak elilksende kiviydhigp nvcmgdhkek dayevrrfsv kphcsqegrq
      361 hteicnpnsc idksspechi frllivhyas asglcsrdas htslscmfm
//
LOCUS       XP_041323284             278 aa            linear   VRT 06-MAY-2021
DEFINITION  homeobox protein Nkx-6.2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323284
VERSION     XP_041323284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..278
                     /product="homeobox protein Nkx-6.2"
                     /calculated_mol_wt=30257
     Region          150..208
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..278
                     /gene="NKX6-2"
                     /coded_by="XM_041467350.1:261..1097"
                     /db_xref="GeneID:121353477"
ORIGIN      
        1 mlavgqmdan rqsafvlssa plaalhnmae mktslfpyal qnpsgfkapa lgglntqlpl
       61 gtphgisdil grpvgsasnl lgglpringl aasagmyfsp aavsrypkpl aelpgrppif
      121 wpgvvqgspw rdprlacpaq tgmvldkdgk kkhsrptfsg qqifalektf eqtkylagpe
      181 rarlayslgm tesqvkvwfq nrrtkwrkrh aaemasakkk hdseteklke ssdnedddey
      241 nkpldpnsdd ekitrllkkh kstnlslvsp cstssdtl
//
LOCUS       XP_041323285            2629 aa            linear   VRT 06-MAY-2021
DEFINITION  cilia- and flagella-associated protein 46 [Pyrgilauda ruficollis].
ACCESSION   XP_041323285
VERSION     XP_041323285.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467351.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2629
                     /product="cilia- and flagella-associated protein 46"
                     /calculated_mol_wt=298265
     CDS             1..2629
                     /gene="CFAP46"
                     /coded_by="XM_041467351.1:1..7890"
                     /db_xref="GeneID:121353479"
ORIGIN      
        1 melavrerll aaeragdvqa lrnayelirs asegqsalds tdnistdlyv lcaeqalqlg
       61 yleissdclq myfrgrfpvn qflgraylcq gqlhapcstd nleefekfvl ffmkaidfat
      121 qerryfflvy nasvlywqlv rpflkpgfry clipslsqiv aalnqieeqd newraelmin
      181 llecfldask lkeakefsst aavfikekvp dkysqifslm vyhklmdisq vekeiqnsic
      241 lsviykmqml klqwdtnvfp sdatanlnsl yvllkqydvp pasvlsvkip lilelahfsl
      301 kvnctelaah cildlksapi tdqgklieie cleceyemkk dsteivtytk giveaqlkli
      361 knlefklkra vqlgdpgviq vvcatqwnlc lsllqhnlhq hvrkplisva dvleeidstl
      421 illrcqvhme iarieedgdr leaalehlqk amhlncgqyq ehlrlsfnrl rlsamlyesp
      481 ehledqavml ieqakrgkqk dnmrkkrsll vnaglalapd tfqrvldsen eakvfsgksn
      541 sqisylcaka qhhtksvekv dehlkhlrng ngreriilwa dlakvackqe vwdvcraacr
      601 fcllyddilf revtkhkask tkkntasatm midgqgdsss gesllpaksf sfeadllril
      661 aeirfinaea tvhllrlqgv klndhavppe atyqcrpgyl pdsdpewkty slwidnlsry
      721 amenfqraae igeelneawi vhnavvyiln ynrhvissgr qkdiieylqt llgaikavgh
      781 dgsteillml cnalarglii swipkpkpae kmedtaaess skaatkkqek antiqsfsvd
      841 psgfpdikaa levcefalna mtgaipneki siaaqqqiia twvkakqlnq qqirhqhgtr
      901 eekndearnp larilvglem yscnglglmd ftvpslsqll dlalecswsd slvelqtltr
      961 ltyfayvsqd yervmtcskk vlesnenfvl nrntkkygll gnkvrqemls iaaciqgkii
     1021 menlsgrkhr rvaasktfvq sarhagdagn yslvmfaarh fwnacfpllg sphereqfke
     1081 ptkiilknii kaesknkqek kdtcplhqwi tkdfqnigvs vgcfppgaee dltlrtslyg
     1141 llfhiyadka dwetalklld eaiqvlpqtr hkllifklma tvragsgckf mmaiqktsqe
     1201 gedylsqiwr hlvtvsrstv gqlscfqnam valqkqenew qrvdylmefa eclycnqfpl
     1261 ndaikplewa vdlllgmkfp lqsseeegin aiskllpten akmdngangt msqmnledls
     1321 nikqlealfr aqtlmalfsg hgssfhqqhc lmayasiiri wqvslsafsk tsqptstqnv
     1381 qsktpkkdkd kkrekqvdvp vskekpkeke svdalpasve ewaqydcpne irdtfkqktn
     1441 sygihwdnfp kptctlyfmd llskelqkif cphlilpvfq laevianevl ecrslsdlyh
     1501 lrialicsdl klsqasvyhe kaagevyise leqamcrqei alkkeknvcm ktekrkvqfe
     1561 naqlngsrne niltssekgf evnvvtgkgl salsfphlwv ekaevliqlg lyqparllls
     1621 eahaatqelr alsdmsrcly llavlanlek nhrqakalle kaqllggdeq fwydstlslt
     1681 eaileeegeg kqsmacevle htisvlrstl lerpgrqsel gfmiaslear ktliqihfaq
     1741 dhmtidansa qlphilqesy nklvqvekdf lhhghknysa eillqcanic rmtakqesnk
     1801 rnkhshylda cslaqravsr teevfnnics lfafnestnv siplmrqlal rkinlveill
     1861 difhlaitek klknvgetsf hefmeeiiie ddaieqdwky mkrtmahitl aqlanmqnlc
     1921 kgcpniksrc lyltgktlrl lainadpvys eiywkpnvme daisdirkss ltsaecseqd
     1981 vtesglstne chndkyrgki qelktqqrma qkylsqsnea llqsvaiafs hnvtdvlala
     2041 slemaecfrq fdpistsqfl alhqscsvst mmkkilltat sntsssqlaa llhlqnqlkq
     2101 nrntsdllkc veqqltansv awrnlcipve hfnivdelps sfcivilqhs edrsqlyssl
     2161 ievpkvstar qkgkltqrmv qakvsrfpvn pdvfrillek trlykqqkmk nhlkptvipn
     2221 lkecvsktdv tatgkrgdse ldltsdfsei ieimedylkp tlsqfdfsav resqcvsade
     2281 tgkkkvkdkd tkqvgmqdtp adlglcvvll vdtlfmelpl ealsifkeeg issvsrdfsl
     2341 qflynrlhwa esetefkkkv etskekntka hqkknvqmap vnrdlpsncl pvdtrnlkyi
     2401 vdpynegres easspsqkiq emlekyhhpf aaqwegvign mcapsqvewe qlmtncsafl
     2461 fygmerfmsh vlldwlvamn iprcrlvill dlvrsqqsyq riansdfhks rlrialerpp
     2521 etamllsltg vgsviapqwh tnseehaerl etlfenllsf gkttgqtvhv lqksrshrkr
     2581 dsikeeedsh sspgdeieeq tvctssdppa shpsffncvl yglpniilk
//
LOCUS       XP_041323286             386 aa            linear   VRT 06-MAY-2021
DEFINITION  vertebrate ancient opsin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323286
VERSION     XP_041323286.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467352.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024519985.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..386
                     /product="vertebrate ancient opsin-like"
                     /calculated_mol_wt=43241
     Region          25..315
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          40..64
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          73..95
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          111..133
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          155..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          249..271
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          283..308
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..386
                     /gene="LOC121353481"
                     /coded_by="XM_041467352.1:1..1161"
                     /db_xref="GeneID:121353481"
ORIGIN      
        1 mdafrafeng sllpsysapa rwdpfrgplg siqpwqfrvl aavmllvtsl slaenlaviv
       61 vtfnfkqlrq pvnyvivnls vadflvsltg gtisfltnlk gyffmgywac vlegfavtff
      121 givalwslal laferyvvic rlprnarlrg khaalgivfv wsfsfiwtfp ptsgwssytp
      181 skigttcepn wysgayadrt yiitffttcf ivpllvilvs ygklvwklkk vsdaqgrlgt
      241 trrperqvtr mvvfmiiafl icwmpyatfs ilvtaypsie ldpclaaipa ffsktatvyn
      301 piiyvfmnkq frqcliqlfs csaigtaesn lnltseravp aqerrgrema ptavhstisk
      361 rktgdehrsq qplalltase nkmcpm
//
LOCUS       XP_041323287             144 aa            linear   VRT 06-MAY-2021
DEFINITION  delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323287
VERSION     XP_041323287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467353.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520041.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>144
                     /product="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase,
                     mitochondrial-like"
     Region          22..>95
                     /region_name="crotonase-like"
                     /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase
                     superfamily. This superfamily contains a diverse set of
                     enzymes including enoyl-CoA hydratase, napthoate synthase,
                     methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA
                     dehydratase, and dienoyl-CoA isomerase; cl23717"
                     /db_xref="CDD:474030"
     CDS             1..144
                     /gene="LOC121353482"
                     /coded_by="XM_041467353.1:1..>432"
                     /db_xref="GeneID:121353482"
ORIGIN      
        1 msppvsprel hwfvlvctgf pwcrelvqcf qdisedpscr avvisgagsa ftagidlsdl
       61 gsllaqlpqd daarrawalr rrilefqesf svmervgtdd ndndyddddd ddnddeddnd
      121 edddedgmtv tmrmtmtmtm tmrv
//
LOCUS       XP_041323288              80 aa            linear   VRT 06-MAY-2021
DEFINITION  proteasome subunit beta type-5-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323288
VERSION     XP_041323288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520042.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>80
                     /product="proteasome subunit beta type-5-like"
     Region          4..>80
                     /region_name="Ntn_hydrolase"
                     /note="The Ntn hydrolases (N-terminal nucleophile) are a
                     diverse superfamily of of enzymes that are activated
                     autocatalytically via an N-terminally lcated nucleophilic
                     amino acid. N-terminal nucleophile (NTN-) hydrolase
                     superfamily, which contains a...; cl00467"
                     /db_xref="CDD:469781"
     CDS             1..80
                     /gene="LOC121353483"
                     /coded_by="XM_041467354.1:<1..>240"
                     /db_xref="GeneID:121353483"
ORIGIN      
        1 qsphgvtvav dsratagsyi asqsvlkvlp inarilgtma ggaadcsfwq rlvarqcrvq
       61 elrnkepvsv aaaskllanl
//
LOCUS       XP_041323290             135 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase delta catalytic subunit, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323290
VERSION     XP_041323290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467356.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520052.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>135
                     /product="DNA polymerase delta catalytic subunit"
     Region          <2..135
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     CDS             1..135
                     /gene="POLD1"
                     /coded_by="XM_041467356.1:<1..>407"
                     /codon_start=3
                     /db_xref="GeneID:121353484"
ORIGIN      
        1 fgatirsfds ekdllqswae fvrivdpdvv tgynihnfdl pyliqraqvl qvdsfpylgr
       61 vrgvpsqvkd safqsrqlgr regkvvstpg rvtldmlqvl lrehklrsys lnavsahflh
      121 eqkedvphgi itelq
//
LOCUS       XP_041323291             194 aa            linear   VRT 06-MAY-2021
DEFINITION  tenascin-R-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323291
VERSION     XP_041323291.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467357.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520063.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="tenascin-R-like"
                     /calculated_mol_wt=21793
     Region          <17..191
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            92
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(120,133,135)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(139,142..143,152..153)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..194
                     /gene="LOC121353485"
                     /coded_by="XM_041467357.1:16..600"
                     /db_xref="GeneID:121353485"
ORIGIN      
        1 mggsggfwga pdsprqvfqr rqdgstdfwr gwesyahgfg nvsgefwlgn ealhelttat
       61 ptelrvdlrt ardaafalyr dfavggaeer yrltvgafsg tagdalsyhs gspfstrdrd
      121 frdprdrrdp sgrprpppca vayggawwyr nchyanlngr ygtprdhqgi hwfpwkgfnv
      181 sipftemklr pqrg
//
LOCUS       XP_041323292             149 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolar pre-ribosomal-associated protein 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323292
VERSION     XP_041323292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520085.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..149
                     /product="nucleolar pre-ribosomal-associated protein
                     1-like"
                     /calculated_mol_wt=16808
     CDS             1..149
                     /gene="LOC121353486"
                     /coded_by="XM_041467358.1:825..1274"
                     /db_xref="GeneID:121353486"
ORIGIN      
        1 mlqvamfkqd sdnisipvsh iddvldmvdv liegsdgfde eigfslnedm iiqtfpfsav
       61 vpaalearni lllqsehgtg ahiveylvav ftdllhsqre plalcfmfql yekglkslkv
      121 akcpqlyqfn ryhklwipkr sqepvvqnt
//
LOCUS       XP_041323293             807 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323293
VERSION     XP_041323293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467359.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..807
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X1"
                     /calculated_mol_wt=87654
     Region          86..150
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(90..91,94..95,98,101..102,106,127..128)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(105,108,111..112,129,132..133,136,138..140,142)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          166..230
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Site            order(189,193,199,212..215,241)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Region          383..483
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <511..772
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..807
                     /gene="ARNT"
                     /coded_by="XM_041467359.1:87..2510"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarsdde qssadkerla renhseierr rrnkmtayit elsdmvptcs
      121 alarkpdklt ilrmavshmk slrgtgntst dgtykpsflt dqelkhlile aadgflfivs
      181 cetgrvvyvs dsvtpvlnqp qsewfgstly eqvhpddvgk lreqlstsen altegtkpwc
      241 lstkdaaapp enaskgrild lktgtvkkeg qqsmrmcmgs rrsficrmrc gnssvdpvav
      301 nrlsfmrnrc rnglgaakdg ephyvvvhct gyikawppag vslpdddpda gqgskfclva
      361 igrlqvtssp nctdmsnvcq ptefisrhnt egiftfidhr cvatvgyqpq ellgkdivdf
      421 chpedqqllr dsfqqvvklk gqvlsvmfrf rsknrewllm rtssftfqnp ysdeieyiic
      481 tntnvknssq esrpalansm prpqlgqsvs lpldmgtapl psrqqqppqa elevgpgres
      541 lagyehsqvp vqpvsaagpe hskplekaeg lfsqerdprf geifpgistd eskaipastm
      601 panpplfaqg ntftaarpae nfrsssmipp vniiqqqpsp agrilsqisr hsspaqvsgt
      661 twapgtrpvf tpqqvasqtv ktrppsfgmg tfqgtpssfs smtapgstas pttvpypala
      721 srgtgftate aaqtpapfqp raadavgmwp qwqgqhhgpg sgeqhvqqpq psqpevfpdm
      781 ltmlgdqgpn ynneefpeln ifpsfse
//
LOCUS       XP_041323294             806 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323294
VERSION     XP_041323294.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467360.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X2"
                     /calculated_mol_wt=87582
     Region          86..150
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(90..91,94..95,98,101..102,106,127..128)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(105,108,111..112,129,132..133,136,138..140,142)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          166..230
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Site            order(189,193,199,212..215,241)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Region          383..483
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <486..773
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..806
                     /gene="ARNT"
                     /coded_by="XM_041467360.1:87..2507"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarsdde qssadkerla renhseierr rrnkmtayit elsdmvptcs
      121 alarkpdklt ilrmavshmk slrgtgntst dgtykpsflt dqelkhlile aadgflfivs
      181 cetgrvvyvs dsvtpvlnqp qsewfgstly eqvhpddvgk lreqlstsen altegtkpwc
      241 lstkdaaapp enaskgrild lktgtvkkeg qqsmrmcmgs rrsficrmrc gnssvdpvav
      301 nrlsfmrnrc rnglgaakdg ephyvvvhct gyikawppag vslpdddpda gqgskfclva
      361 igrlqvtssp nctdmsnvcq ptefisrhnt egiftfidhr cvatvgyqpq ellgkdivdf
      421 chpedqqllr dsfqqvvklk gqvlsvmfrf rsknrewllm rtssftfqnp ysdeieyiic
      481 tntnvknssq esrpalansm prpqlgqsvs lpldmgtapl psrqqqppqa elevgpgres
      541 lagyehsqvp vqpvsaagpe hskplekaeg lfsqerdprf geifpgistd eskaipastm
      601 panpplfaqg ntftaarpae nfrsssmipp vniiqqqpsp agrilsqisr hsspaqvsgt
      661 twapgtrpvf tpqqvasqtv ktrppsfgmg tfqgtpssfs smtapgstas pttvpypala
      721 srgtgfttea aqtpapfqpr aadavgmwpq wqgqhhgpgs geqhvqqpqp sqpevfpdml
      781 tmlgdqgpny nneefpelni fpsfse
//
LOCUS       XP_041323295             792 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323295
VERSION     XP_041323295.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467361.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X3"
                     /calculated_mol_wt=85965
     Region          71..135
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(75..76,79..80,83,86..87,91,112..113)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(90,93,96..97,114,117..118,121,123..125,127)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          151..215
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Site            order(174,178,184,197..200,226)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Region          368..468
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <496..757
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..792
                     /gene="ARNT"
                     /coded_by="XM_041467361.1:87..2465"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarenhs eierrrrnkm tayitelsdm vptcsalark pdkltilrma
      121 vshmkslrgt gntstdgtyk psfltdqelk hlileaadgf lfivscetgr vvyvsdsvtp
      181 vlnqpqsewf gstlyeqvhp ddvgklreql stsenalteg tkpwclstkd aaappenask
      241 grildlktgt vkkegqqsmr mcmgsrrsfi crmrcgnssv dpvavnrlsf mrnrcrnglg
      301 aakdgephyv vvhctgyika wppagvslpd ddpdagqgsk fclvaigrlq vtsspnctdm
      361 snvcqptefi srhntegift fidhrcvatv gyqpqellgk divdfchped qqllrdsfqq
      421 vvklkgqvls vmfrfrsknr ewllmrtssf tfqnpysdei eyiictntnv knssqesrpa
      481 lansmprpql gqsvslpldm gtaplpsrqq qppqaelevg pgreslagye hsqvpvqpvs
      541 aagpehskpl ekaeglfsqe rdprfgeifp gistdeskai pastmpanpp lfaqgntfta
      601 arpaenfrss smippvniiq qqpspagril sqisrhsspa qvsgttwapg trpvftpqqv
      661 asqtvktrpp sfgmgtfqgt pssfssmtap gstaspttvp ypalasrgtg ftateaaqtp
      721 apfqpraada vgmwpqwqgq hhgpgsgeqh vqqpqpsqpe vfpdmltmlg dqgpnynnee
      781 fpelnifpsf se
//
LOCUS       XP_041323296             790 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323296
VERSION     XP_041323296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..790
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..790
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X4"
                     /calculated_mol_wt=85870
     Region          86..150
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(90..91,94..95,98,101..102,106,127..128)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(105,108,111..112,129,132..133,136,138..140,142)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          166..230
                     /region_name="PAS"
                     /note="PAS domain; smart00091"
                     /db_xref="CDD:214512"
     Site            order(189,193,199,212..215,241)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:238075"
     Region          383..483
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <511..755
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..790
                     /gene="ARNT"
                     /coded_by="XM_041467362.1:87..2459"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarsdde qssadkerla renhseierr rrnkmtayit elsdmvptcs
      121 alarkpdklt ilrmavshmk slrgtgntst dgtykpsflt dqelkhlile aadgflfivs
      181 cetgrvvyvs dsvtpvlnqp qsewfgstly eqvhpddvgk lreqlstsen altegtkpwc
      241 lstkdaaapp enaskgrild lktgtvkkeg qqsmrmcmgs rrsficrmrc gnssvdpvav
      301 nrlsfmrnrc rnglgaakdg ephyvvvhct gyikawppag vslpdddpda gqgskfclva
      361 igrlqvtssp nctdmsnvcq ptefisrhnt egiftfidhr cvatvgyqpq ellgkdivdf
      421 chpedqqllr dsfqqvvklk gqvlsvmfrf rsknrewllm rtssftfqnp ysdeieyiic
      481 tntnvknssq esrpalansm prpqlgqsvs lpldmgtapl psrqqqppqa elevgpgres
      541 lagyehsqvp vqpvsaagpe hskplekaeg lfsqerdprf geifpgistd eskaipastm
      601 panpplfaqg ntftaarpae nfrsssmipp vniiqqqpsp agrilsqisr hsspaqqvas
      661 qtvktrppsf gmgtfqgtps sfssmtapgs taspttvpyp alasrgtgft ateaaqtpap
      721 fqpraadavg mwpqwqgqhh gpgsgeqhvq qpqpsqpevf pdmltmlgdq gpnynneefp
      781 elnifpsfse
//
LOCUS       XP_041323297             785 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323297
VERSION     XP_041323297.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467363.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..785
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X5"
                     /calculated_mol_wt=85370
     Region          86..150
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(90..91,94..95,98,101..102,106,127..128)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(105,108,111..112,129,132..133,136,138..140,142)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          163..268
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          361..461
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <489..750
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..785
                     /gene="ARNT"
                     /coded_by="XM_041467363.1:87..2444"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarsdde qssadkerla renhseierr rrnkmtayit elsdmvptcs
      121 alarkpdklt ilrmavshmk slrgtgntst dgtykpsflt dqelkhlile aadgflfivs
      181 cetgrvvyvs dsvtpvlnqp qsewfgstly eqvhpddvgk lreqlstsen altgrildlk
      241 tgtvkkegqq smrmcmgsrr sficrmrcgn ssvdpvavnr lsfmrnrcrn glgaakdgep
      301 hyvvvhctgy ikawppagvs lpdddpdagq gskfclvaig rlqvtsspnc tdmsnvcqpt
      361 efisrhnteg iftfidhrcv atvgyqpqel lgkdivdfch pedqqllrds fqqvvklkgq
      421 vlsvmfrfrs knrewllmrt ssftfqnpys deieyiictn tnvknssqes rpalansmpr
      481 pqlgqsvslp ldmgtaplps rqqqppqael evgpgresla gyehsqvpvq pvsaagpehs
      541 kplekaeglf sqerdprfge ifpgistdes kaipastmpa npplfaqgnt ftaarpaenf
      601 rsssmippvn iiqqqpspag rilsqisrhs spaqvsgttw apgtrpvftp qqvasqtvkt
      661 rppsfgmgtf qgtpssfssm tapgstaspt tvpypalasr gtgftateaa qtpapfqpra
      721 adavgmwpqw qgqhhgpgsg eqhvqqpqps qpevfpdmlt mlgdqgpnyn neefpelnif
      781 psfse
//
LOCUS       XP_041323298             784 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323298
VERSION     XP_041323298.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467364.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..784
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X6"
                     /calculated_mol_wt=85299
     Region          86..150
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(90..91,94..95,98,101..102,106,127..128)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(105,108,111..112,129,132..133,136,138..140,142)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          163..268
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          361..461
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <464..751
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..784
                     /gene="ARNT"
                     /coded_by="XM_041467364.1:87..2441"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarsdde qssadkerla renhseierr rrnkmtayit elsdmvptcs
      121 alarkpdklt ilrmavshmk slrgtgntst dgtykpsflt dqelkhlile aadgflfivs
      181 cetgrvvyvs dsvtpvlnqp qsewfgstly eqvhpddvgk lreqlstsen altgrildlk
      241 tgtvkkegqq smrmcmgsrr sficrmrcgn ssvdpvavnr lsfmrnrcrn glgaakdgep
      301 hyvvvhctgy ikawppagvs lpdddpdagq gskfclvaig rlqvtsspnc tdmsnvcqpt
      361 efisrhnteg iftfidhrcv atvgyqpqel lgkdivdfch pedqqllrds fqqvvklkgq
      421 vlsvmfrfrs knrewllmrt ssftfqnpys deieyiictn tnvknssqes rpalansmpr
      481 pqlgqsvslp ldmgtaplps rqqqppqael evgpgresla gyehsqvpvq pvsaagpehs
      541 kplekaeglf sqerdprfge ifpgistdes kaipastmpa npplfaqgnt ftaarpaenf
      601 rsssmippvn iiqqqpspag rilsqisrhs spaqvsgttw apgtrpvftp qqvasqtvkt
      661 rppsfgmgtf qgtpssfssm tapgstaspt tvpypalasr gtgftteaaq tpapfqpraa
      721 davgmwpqwq gqhhgpgsge qhvqqpqpsq pevfpdmltm lgdqgpnynn eefpelnifp
      781 sfse
//
LOCUS       XP_041323300             770 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323300
VERSION     XP_041323300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X7"
                     /calculated_mol_wt=83681
     Region          71..135
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(75..76,79..80,83,86..87,91,112..113)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(90,93,96..97,114,117..118,121,123..125,127)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          148..253
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          346..446
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <474..735
                     /region_name="PLN03209"
                     /note="translocon at the inner envelope of chloroplast
                     subunit 62; Provisional"
                     /db_xref="CDD:178748"
     CDS             1..770
                     /gene="ARNT"
                     /coded_by="XM_041467366.1:87..2399"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarenhs eierrrrnkm tayitelsdm vptcsalark pdkltilrma
      121 vshmkslrgt gntstdgtyk psfltdqelk hlileaadgf lfivscetgr vvyvsdsvtp
      181 vlnqpqsewf gstlyeqvhp ddvgklreql stsenaltgr ildlktgtvk kegqqsmrmc
      241 mgsrrsficr mrcgnssvdp vavnrlsfmr nrcrnglgaa kdgephyvvv hctgyikawp
      301 pagvslpddd pdagqgskfc lvaigrlqvt sspnctdmsn vcqptefisr hntegiftfi
      361 dhrcvatvgy qpqellgkdi vdfchpedqq llrdsfqqvv klkgqvlsvm frfrsknrew
      421 llmrtssftf qnpysdeiey iictntnvkn ssqesrpala nsmprpqlgq svslpldmgt
      481 aplpsrqqqp pqaelevgpg reslagyehs qvpvqpvsaa gpehskplek aeglfsqerd
      541 prfgeifpgi stdeskaipa stmpanpplf aqgntftaar paenfrsssm ippvniiqqq
      601 pspagrilsq isrhsspaqv sgttwapgtr pvftpqqvas qtvktrppsf gmgtfqgtps
      661 sfssmtapgs taspttvpyp alasrgtgft ateaaqtpap fqpraadavg mwpqwqgqhh
      721 gpgsgeqhvq qpqpsqpevf pdmltmlgdq gpnynneefp elnifpsfse
//
LOCUS       XP_041323301             769 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323301
VERSION     XP_041323301.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467367.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="aryl hydrocarbon receptor nuclear translocator
                     isoform X8"
                     /calculated_mol_wt=83610
     Region          71..135
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(75..76,79..80,83,86..87,91,112..113)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(90,93,96..97,114,117..118,121,123..125,127)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          148..253
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          346..446
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     Region          <449..736
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..769
                     /gene="ARNT"
                     /coded_by="XM_041467367.1:87..2396"
                     /db_xref="GeneID:121353487"
ORIGIN      
        1 maataasaem asdvsslgaa vgsgnsgsga qaggavtqrp skrrpgldfd ddgegnskfl
       61 rcdddpmpnd kerfarenhs eierrrrnkm tayitelsdm vptcsalark pdkltilrma
      121 vshmkslrgt gntstdgtyk psfltdqelk hlileaadgf lfivscetgr vvyvsdsvtp
      181 vlnqpqsewf gstlyeqvhp ddvgklreql stsenaltgr ildlktgtvk kegqqsmrmc
      241 mgsrrsficr mrcgnssvdp vavnrlsfmr nrcrnglgaa kdgephyvvv hctgyikawp
      301 pagvslpddd pdagqgskfc lvaigrlqvt sspnctdmsn vcqptefisr hntegiftfi
      361 dhrcvatvgy qpqellgkdi vdfchpedqq llrdsfqqvv klkgqvlsvm frfrsknrew
      421 llmrtssftf qnpysdeiey iictntnvkn ssqesrpala nsmprpqlgq svslpldmgt
      481 aplpsrqqqp pqaelevgpg reslagyehs qvpvqpvsaa gpehskplek aeglfsqerd
      541 prfgeifpgi stdeskaipa stmpanpplf aqgntftaar paenfrsssm ippvniiqqq
      601 pspagrilsq isrhsspaqv sgttwapgtr pvftpqqvas qtvktrppsf gmgtfqgtps
      661 sfssmtapgs taspttvpyp alasrgtgft teaaqtpapf qpraadavgm wpqwqgqhhg
      721 pgsgeqhvqq pqpsqpevfp dmltmlgdqg pnynneefpe lnifpsfse
//
LOCUS       XP_041323302             331 aa            linear   VRT 06-MAY-2021
DEFINITION  cathepsin K [Pyrgilauda ruficollis].
ACCESSION   XP_041323302
VERSION     XP_041323302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467368.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="cathepsin K"
                     /calculated_mol_wt=37019
     Region          28..87
                     /region_name="Inhibitor_I29"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     smart00848"
                     /db_xref="CDD:214853"
     Region          118..329
                     /region_name="Peptidase_C1A"
                     /note="Peptidase C1A subfamily (MEROPS database
                     nomenclature); composed of cysteine peptidases (CPs)
                     similar to papain, including the mammalian CPs (cathepsins
                     B, C, F, H, L, K, O, S, V, X and W). Papain is an
                     endopeptidase with specific substrate preferences;
                     cd02248"
                     /db_xref="CDD:239068"
     Site            order(135,141,278,298)
                     /site_type="active"
                     /db_xref="CDD:239068"
     Site            order(183..184,250,276,279,325)
                     /site_type="active"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     CDS             1..331
                     /gene="CTSK"
                     /coded_by="XM_041467368.1:11..1006"
                     /db_xref="GeneID:121353488"
ORIGIN      
        1 mwwpvllall vptalaqlhp epeldaqwel wkkthhkqyn gqadevtrrl iweknlkyin
       61 thnlehslgv htfelamnhl gdmtseevlr tmtglkvprg hqrhnetlfv pdwserapaa
      121 mdwrkkgyvt pvknqgqcgs cwafssvgal egqlkrktgk llslspqnlv dcvanndgcg
      181 ggymtnafey vrqnrgidse dsypyigqde scmysptgka akcrgyreip egnekalkra
      241 varigpisvg idaslpsfqf ysrgvyydes cnaeninhav lavgygaqkg tkhwiiknsw
      301 geewgnkgyv llarnmnnac gvanlasfpk m
//
LOCUS       XP_041323303             422 aa            linear   VRT 06-MAY-2021
DEFINITION  exopolyphosphatase PRUNE1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323303
VERSION     XP_041323303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="exopolyphosphatase PRUNE1 isoform X1"
                     /calculated_mol_wt=45065
     Region          21..290
                     /region_name="PPX1"
                     /note="Inorganic pyrophosphatase/exopolyphosphatase
                     [Energy production and conversion]; COG1227"
                     /db_xref="CDD:440840"
     Region          223..361
                     /region_name="DHHA2"
                     /note="DHHA2 domain; pfam02833"
                     /db_xref="CDD:460719"
     CDS             1..422
                     /gene="PRUNE1"
                     /coded_by="XM_041467369.1:76..1344"
                     /db_xref="GeneID:121353489"
ORIGIN      
        1 merfvagnra alqdhiqqhq eihvvmgnea cdldstvsal alayflaqtt papkaafvpv
       61 lnipradfal rtettfllrd rgipaaslvf rdeidlgglh qagllsltlv dhhvlpgada
      121 aleeavvevl dhrplerdrg ppcqvtvepv gscatlvter ilqgppgvld rttaallhgt
      181 illdcinlsp aagkvtprdv acvslleerf pelpardavf galqaakfdv tgltteqmlr
      241 kdlkvlsnde vviaisgvfe dletfllrpg llqeleafcq argyaglvam tvsfnerhep
      301 trklavysaq dalrstlcra leeatspsll lrplqspwpr vaayaqgnav aarkkvlpil
      361 raalgglgaa ggpeeevvpp ptpmnslvee cplaqavppl cpqdvlervs riavgqppgs
      421 pk
//
LOCUS       XP_041323304             397 aa            linear   VRT 06-MAY-2021
DEFINITION  exopolyphosphatase PRUNE1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323304
VERSION     XP_041323304.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467370.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..397
                     /product="exopolyphosphatase PRUNE1 isoform X2"
                     /calculated_mol_wt=42156
     Region          7..265
                     /region_name="PPX1"
                     /note="Inorganic pyrophosphatase/exopolyphosphatase
                     [Energy production and conversion]; COG1227"
                     /db_xref="CDD:440840"
     Region          198..336
                     /region_name="DHHA2"
                     /note="DHHA2 domain; pfam02833"
                     /db_xref="CDD:460719"
     CDS             1..397
                     /gene="PRUNE1"
                     /coded_by="XM_041467370.1:288..1481"
                     /db_xref="GeneID:121353489"
ORIGIN      
        1 mgneacdlds tvsalalayf laqttpapka afvpvlnipr adfalrtett fllrdrgipa
       61 aslvfrdeid lgglhqagll sltlvdhhvl pgadaaleea vvevldhrpl erdrgppcqv
      121 tvepvgscat lvterilqgp pgvldrttaa llhgtilldc inlspaagkv tprdvacvsl
      181 leerfpelpa rdavfgalqa akfdvtgltt eqmlrkdlkv lsndevviai sgvfedletf
      241 llrpgllqel eafcqargya glvamtvsfn erheptrkla vysaqdalrs tlcraleeat
      301 spslllrplq spwprvaaya qgnavaarkk vlpilraalg glgaaggpee evvppptpmn
      361 slveecplaq avpplcpqdv lervsriavg qppgspk
//
LOCUS       XP_041323305             269 aa            linear   VRT 06-MAY-2021
DEFINITION  protein AF1q isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323305
VERSION     XP_041323305.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467371.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="protein AF1q isoform X1"
                     /calculated_mol_wt=29057
     Region          186..258
                     /region_name="WRNPLPNID"
                     /note="Putative WW-binding domain and destruction box;
                     pfam15017"
                     /db_xref="CDD:464448"
     CDS             1..269
                     /gene="MLLT11"
                     /coded_by="XM_041467371.1:553..1362"
                     /db_xref="GeneID:121353490"
ORIGIN      
        1 mtsrlgkhrw alrhrrapgr gvrseppsaa lsrsqgarwg lpklggkdrv wgqrwtggqc
       61 pgppggtaec ehaaegfrse pasihpqlgg ptrrippapp plpsspssla rvgaadssai
      121 itiititilp prgravggaa lqtrqrrqtk atllrprlpg tkspartept apgtarslkm
      181 ldtissqyds fiywrmpipr ldtaeleglg ladmalykpk gglgklsdhr gsqelsqeee
      241 eedsllwfns fnfwrapias issldfdli
//
LOCUS       XP_041323306              90 aa            linear   VRT 06-MAY-2021
DEFINITION  protein AF1q isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323306
VERSION     XP_041323306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..90
                     /product="protein AF1q isoform X2"
                     /calculated_mol_wt=10173
     Region          7..79
                     /region_name="WRNPLPNID"
                     /note="Putative WW-binding domain and destruction box;
                     pfam15017"
                     /db_xref="CDD:464448"
     CDS             1..90
                     /gene="MLLT11"
                     /coded_by="XM_041467372.1:119..391"
                     /db_xref="GeneID:121353490"
ORIGIN      
        1 mldtissqyd sfiywrmpip rldtaelegl gladmalykp kgglgklsdh rgsqelsqee
       61 eeedsllwfn sfnfwrapia sissldfdli
//
LOCUS       XP_041323307              78 aa            linear   VRT 06-MAY-2021
DEFINITION  CDC42 small effector protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323307
VERSION     XP_041323307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..78
                     /product="CDC42 small effector protein 1"
                     /calculated_mol_wt=8736
     Region          28..>46
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cl00113"
                     /db_xref="CDD:412170"
     CDS             1..78
                     /gene="CDC42SE1"
                     /coded_by="XM_041467373.1:436..672"
                     /db_xref="GeneID:121353491"
ORIGIN      
        1 msdfwhklgc cvvekpqpkk rrrridrsmi gepmnfvhlt higsgdmaag eglpmtgavq
       61 emrskggrer qwsnsrvl
//
LOCUS       XP_041323309              78 aa            linear   VRT 06-MAY-2021
DEFINITION  CDC42 small effector protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323309
VERSION     XP_041323309.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467375.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..78
                     /product="CDC42 small effector protein 1"
                     /calculated_mol_wt=8736
     Region          28..>46
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cl00113"
                     /db_xref="CDD:412170"
     CDS             1..78
                     /gene="CDC42SE1"
                     /coded_by="XM_041467375.1:415..651"
                     /db_xref="GeneID:121353491"
ORIGIN      
        1 msdfwhklgc cvvekpqpkk rrrridrsmi gepmnfvhlt higsgdmaag eglpmtgavq
       61 emrskggrer qwsnsrvl
//
LOCUS       XP_041323310            1428 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA
            domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323310
VERSION     XP_041323310.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467376.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1428
                     /product="LOW QUALITY PROTEIN: regulation of nuclear
                     pre-mRNA domain-containing protein 2"
                     /calculated_mol_wt=150488
     Region          30..153
                     /region_name="CID_RPRD2"
                     /note="CID (CTD-Interacting Domain) of Regulation of
                     nuclear pre-mRNA domain-containing protein 2; cd17001"
                     /db_xref="CDD:340798"
     Site            order(43..45,48,86,89..90,93..94,129,133)
                     /site_type="other"
                     /note="CTD binding site [polypeptide binding]"
                     /db_xref="CDD:340798"
     Region          <125..>324
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          <482..>633
                     /region_name="PRK11901"
                     /note="hypothetical protein; Reviewed"
                     /db_xref="CDD:237015"
     CDS             1..1428
                     /gene="RPRD2"
                     /coded_by="XM_041467376.1:24..4310"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121353492"
ORIGIN      
        1 maaggggggr assssssssa aaassaagal easldrklqa vtntmesiqg lsswclenkr
       61 hhstivyhwm kwlrrsafph rlnlfyland viqnckrkna ivfrdtfaev lpeaaslvkd
      121 psvsksieri fkiwedrnvy peetilalke alsttfktqk qlkeslnkpn kpwkksqtst
      181 npkaalkski vaefrpqsli delllykrse dqielkekql stmrvdvcst etlkclkdkt
      241 ggkkfskefe easskleefv ngldkqvkng psltealena gifyeaqyke vkvvanaykt
      301 fanrvsnlkk kldqlkatlp dpeespvpsp smdapsptgs espfqgmgee nstrspaaga
      361 rkmvspepat dnrdvedmel sdveddtski iveerkdkqa apapaptkte svpkavpsaa
      421 aaatasgtva tpapapptpp apkvvstapi plaptlalpn lanvdlakis silssltsvm
      481 kstgvspasr pspgtptsps altsglktpv lgtpsapsnp lanilskvei tpesilsals
      541 ktqtqtapal qglssllqsv agntvqsgep asqstsaspa nttvpclkgr nvpsnpqsfi
      601 aksfgyspns ttaevsstsv nkapvghtpa lsssgfkppa nslgfssshp tspssllpte
      661 tslgqsseis kaklesepps pslemkihnf lkgnpgfsgl nlnipilssl gssmatesht
      721 sdfqrgptst smdnvdgtpv rdersgtptq demmdkptss nvdtisllsk imspgsstps
      781 strsplqgrd dgysqelpss vhgyrpfglg respaslykp pvdsrempss lmdssqekfy
      841 pdtsfqeded yrdfdysgpp psamlnlekk pvksilkssk lpdsaeyqpv lssygqrsqe
      901 fgvkpsfppa mrslldqses cdplasspgm fgsygrrgkd sasdgspsps kndvfftpds
      961 nhsslskpgl pqkqysdsph alphrslfsp qnalpspasr ppaaggdkpl gssisatsti
     1021 efknmlknas rkpseekhfg qipksssgev gglsgavkge pqppeehyri etrvssscld
     1081 lpdsteekga pietlgyhna ssrgmsgepi qtvesirvlg kgsrghgreg sragwfelss
     1141 ggsafdngps gsselpgmgg fpapykehvp pfpesvnnfr tnnfssafeh hlpppplapp
     1201 plehgnpfpr dpvgppavpp paptkdhggl fprdhsvppr mpsvdhanpf sketpaplpl
     1261 phgvppppsv ehagvpfptp ppppvpgeha gvpfpaqqpp pagehggvpf pappplehga
     1321 gafpkehgtm qgtlkehfgg aqprdplprs xxxxxxxxxx arglgppahr dpggrgsvll
     1381 rtpraefrpr epfggrdpfq slkrprppfg rggapfftpk rpffppry
//
LOCUS       XP_041323311             705 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine--tRNA ligase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041323311
VERSION     XP_041323311.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467377.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..705
                     /product="threonine--tRNA ligase, mitochondrial"
                     /calculated_mol_wt=78654
     Region          1..697
                     /region_name="PLN02908"
                     /note="threonyl-tRNA synthetase"
                     /db_xref="CDD:178496"
     CDS             1..705
                     /gene="TARS2"
                     /coded_by="XM_041467377.1:67..2184"
                     /db_xref="GeneID:121353493"
ORIGIN      
        1 msalagsrll lagaprrhrv sgpdperlrl fqrlraaaae rwngpgdgdg dgagggagsg
       61 rlppgtpiri alpggrrlpg ralrttpfqv aaelgaglae valvarvngt lqdldrpleg
      121 dtdlelldfs tpegreafwr ssacvlgava eqffgatlct tratedgffc dvhmgsrtvq
      181 saelpvleea catfararhr ferleatrqq laellqhntf qlqqleevts ptatvyrcgp
      241 llqlchgpll rhtgliralr vltssaalwg gaggqslqrv aavafpstre leqweraqee
      301 aaqrdhrrig kdqelfffhk fspgscfflp rgahvyntlv efirseyrar gfsevvtpnl
      361 fsprlwelsg hwqhysphif svpatpetls lkpmncpahc lmfahrprsw relplrladf
      421 gvlhrneppg tltgltrvrr fqqddahifc tleqleseid ssldfiravy avlgfsfrla
      481 latrpdgflg dpetwdraeq qlerslknfg qpwelspgdg afygpkidir irdalgrhhq
      541 cgtiqldfqm perfeleyas psgtparpvl ihravlgsve rmvavlaesy ggrwplwlsp
      601 lqamvipqtp evedyarevq avlrrgglla dldgdpgttl arkirraqla hynfqlvvgr
      661 rerergtvsv rsrenrqlge lelprvlqrl qelrdsrvpd aeqrf
//
LOCUS       XP_041323312             419 aa            linear   VRT 06-MAY-2021
DEFINITION  extracellular matrix protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323312
VERSION     XP_041323312.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467378.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="extracellular matrix protein 1"
                     /calculated_mol_wt=45814
     Region          25..419
                     /region_name="ECM1"
                     /note="Extracellular matrix protein 1 (ECM1); pfam05782"
                     /db_xref="CDD:461739"
     CDS             1..419
                     /gene="ECM1"
                     /coded_by="XM_041467378.1:136..1395"
                     /db_xref="GeneID:121353494"
ORIGIN      
        1 maafglflll saaalasghl qqvvqesldl rppnikqvlq qeqdlevppd ilvggamfps
       61 ssppvwgsal dgfppawpma atvtehcrdp ptpppplllp pnafahlrrq aaalaalrpr
      121 mndccrhhsp lpcarrawtd vldgfctdef gvktrqfhcc rrhgaarrrc faqetpaptw
      181 dplptwdpnv awdlvteppf ppgeptatnl gnicglralr pgtpgpggrs gprvrlrvrl
      241 ereygrccrn eslscahnaw lkglnrfcre essvktgqhr ccqrggprar grcfaaaaph
      301 peydrelhnv slarpgpall rslcgptrlf tktrpvpell gamtaaccpl ppeergacar
      361 eqlsqgiatl catprdawrd pqgccsweep errrcfdnty lsqvtlgaal appppghee
//
LOCUS       XP_041323313            1286 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323313
VERSION     XP_041323313.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467379.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1286
                     /product="histone-lysine N-methyltransferase SETDB1
                     isoform X1"
                     /calculated_mol_wt=143640
     Region          200..255
                     /region_name="DUF5604"
                     /note="Domain of unknown function (DUF5604); pfam18300"
                     /db_xref="CDD:408109"
     Region          265..346
                     /region_name="Tudor_SETDB1_rpt1"
                     /note="first Tudor domain found in SET domain bifurcated 1
                     (SETDB1) and similar proteins; cd20382"
                     /db_xref="CDD:410453"
     Site            order(301,304..307)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410453"
     Region          353..422
                     /region_name="Tudor_SETDB1_rpt2"
                     /note="second Tudor domain found in SET domain bifurcated
                     1 (SETDB1) and similar proteins; cd21181"
                     /db_xref="CDD:410548"
     Site            order(362,365,407..410,413..415)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410548"
     Region          597..672
                     /region_name="MBD"
                     /note="Methyl-CpG binding domain; smart00391"
                     /db_xref="CDD:128673"
     Site            order(611,613,615,622,624,633,636,640)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          674..>875
                     /region_name="SET_SETDB1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain bifurcated 1 (SETDB1) and similar
                     proteins; cd10517"
                     /db_xref="CDD:380915"
     Region          <1197..1286
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1214..1219,1227..1229,1258..1261)
                     /site_type="active"
                     /db_xref="CDD:380915"
     CDS             1..1286
                     /gene="SETDB1"
                     /coded_by="XM_041467379.1:147..4007"
                     /db_xref="GeneID:121353495"
ORIGIN      
        1 mdsqdikelq eevmeelgis meelreiidk evensewvrq rkqqleeleq cmrhkeeeva
       61 hvdqliddav ramdkcetla kelysmmglq yresssedea paatevieip deedddvmsv
      121 dsgwkrssss prisrdqsll reamaamrks ardvakfmda vnkktnlqea qkdaqppqep
      181 pgtaqpvtvp aapsndlntd gdlkvgmril gkkrtktwhk gtliaiqpvg agkkykvkfd
      241 nkgksllsgn hiaydyhpsa erhhvgrrvv arykdgnqmw lyagivaetp nvknkdrfli
      301 ffddgyasyv kewelypvcr plkkawedie dvscrdfiee yitaypnrpm vllkngqlik
      361 tewegtwwks rveevdgslv kilflealpm gtagvsfsfp qedrrcewiy rgstrlepmf
      421 smktsastqe kkqsgqtrtr pnvgavrskg pvvqytqdla gagpqykape paarpaspqp
      481 aemecsdtql aqgrkqvakk stsfrpgsvg sghsspsspv lgdtpaagra lpapqhrvps
      541 svpssvpsqp fhgmmdrvpn epsyraplek tfyfphvcny dclarvrpvr sdqyrsrnpl
      601 lipllydfrr mtarrrvnrk mgfhvlyktp cglclrsmhe ierylfetdc dflflemfcl
      661 dpyvlvdrkf qpykpyyyia ditkgkedvp lscvneidnt pppqvayske ripgkgvyin
      721 tsweflvgcd ckdgcrdksr cachqltiqa sgctpggqin pnsgyqhkrl eeclptgvye
      781 cnkrckcnvn mctnrlvqhg lqvrlqlfkt qnkgwgircl ddiakgsfvc iyagkiltdd
      841 fadkeglemg deyfanldhi esvenfkegy esdakcssdn sgvdlkdddd eedntgteel
      901 eesnedssdd nfckdenfga ssvprsyatr rqtrgqrdhg pseaaskdlg ltrplgheep
      961 atappcklpv seeisknkva swlssnnvae sfqdsdsass frvgeggegk avkmeisver
     1021 ekgcastpgd lngeakvakk eepeestkip glsslgrryg ynpcpprleg irrplsgtvl
     1081 lqsrrrslap pptsenvlmv ssstdsdeeh ragqapgtan dsddiqtiss gseeeedkkn
     1141 pssgsagpvk rqvavkstrg falksthgia ikstplaaad kgesagpvrr strqfydgee
     1201 ncyiidakle gnlgrylnhs ctpnlfvqnv fvdthdlrfp wvaffaskri ragteltwdy
     1261 nyevgsvegk ellcccgaid crgrll
//
LOCUS       XP_041323314            1286 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323314
VERSION     XP_041323314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1286
                     /product="histone-lysine N-methyltransferase SETDB1
                     isoform X1"
                     /calculated_mol_wt=143640
     Region          200..255
                     /region_name="DUF5604"
                     /note="Domain of unknown function (DUF5604); pfam18300"
                     /db_xref="CDD:408109"
     Region          265..346
                     /region_name="Tudor_SETDB1_rpt1"
                     /note="first Tudor domain found in SET domain bifurcated 1
                     (SETDB1) and similar proteins; cd20382"
                     /db_xref="CDD:410453"
     Site            order(301,304..307)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410453"
     Region          353..422
                     /region_name="Tudor_SETDB1_rpt2"
                     /note="second Tudor domain found in SET domain bifurcated
                     1 (SETDB1) and similar proteins; cd21181"
                     /db_xref="CDD:410548"
     Site            order(362,365,407..410,413..415)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410548"
     Region          597..672
                     /region_name="MBD"
                     /note="Methyl-CpG binding domain; smart00391"
                     /db_xref="CDD:128673"
     Site            order(611,613,615,622,624,633,636,640)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          674..>875
                     /region_name="SET_SETDB1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain bifurcated 1 (SETDB1) and similar
                     proteins; cd10517"
                     /db_xref="CDD:380915"
     Region          <1197..1286
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1214..1219,1227..1229,1258..1261)
                     /site_type="active"
                     /db_xref="CDD:380915"
     CDS             1..1286
                     /gene="SETDB1"
                     /coded_by="XM_041467380.1:86..3946"
                     /db_xref="GeneID:121353495"
ORIGIN      
        1 mdsqdikelq eevmeelgis meelreiidk evensewvrq rkqqleeleq cmrhkeeeva
       61 hvdqliddav ramdkcetla kelysmmglq yresssedea paatevieip deedddvmsv
      121 dsgwkrssss prisrdqsll reamaamrks ardvakfmda vnkktnlqea qkdaqppqep
      181 pgtaqpvtvp aapsndlntd gdlkvgmril gkkrtktwhk gtliaiqpvg agkkykvkfd
      241 nkgksllsgn hiaydyhpsa erhhvgrrvv arykdgnqmw lyagivaetp nvknkdrfli
      301 ffddgyasyv kewelypvcr plkkawedie dvscrdfiee yitaypnrpm vllkngqlik
      361 tewegtwwks rveevdgslv kilflealpm gtagvsfsfp qedrrcewiy rgstrlepmf
      421 smktsastqe kkqsgqtrtr pnvgavrskg pvvqytqdla gagpqykape paarpaspqp
      481 aemecsdtql aqgrkqvakk stsfrpgsvg sghsspsspv lgdtpaagra lpapqhrvps
      541 svpssvpsqp fhgmmdrvpn epsyraplek tfyfphvcny dclarvrpvr sdqyrsrnpl
      601 lipllydfrr mtarrrvnrk mgfhvlyktp cglclrsmhe ierylfetdc dflflemfcl
      661 dpyvlvdrkf qpykpyyyia ditkgkedvp lscvneidnt pppqvayske ripgkgvyin
      721 tsweflvgcd ckdgcrdksr cachqltiqa sgctpggqin pnsgyqhkrl eeclptgvye
      781 cnkrckcnvn mctnrlvqhg lqvrlqlfkt qnkgwgircl ddiakgsfvc iyagkiltdd
      841 fadkeglemg deyfanldhi esvenfkegy esdakcssdn sgvdlkdddd eedntgteel
      901 eesnedssdd nfckdenfga ssvprsyatr rqtrgqrdhg pseaaskdlg ltrplgheep
      961 atappcklpv seeisknkva swlssnnvae sfqdsdsass frvgeggegk avkmeisver
     1021 ekgcastpgd lngeakvakk eepeestkip glsslgrryg ynpcpprleg irrplsgtvl
     1081 lqsrrrslap pptsenvlmv ssstdsdeeh ragqapgtan dsddiqtiss gseeeedkkn
     1141 pssgsagpvk rqvavkstrg falksthgia ikstplaaad kgesagpvrr strqfydgee
     1201 ncyiidakle gnlgrylnhs ctpnlfvqnv fvdthdlrfp wvaffaskri ragteltwdy
     1261 nyevgsvegk ellcccgaid crgrll
//
LOCUS       XP_041323315            1285 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323315
VERSION     XP_041323315.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467381.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1285
                     /product="histone-lysine N-methyltransferase SETDB1
                     isoform X2"
                     /calculated_mol_wt=143569
     Region          200..255
                     /region_name="DUF5604"
                     /note="Domain of unknown function (DUF5604); pfam18300"
                     /db_xref="CDD:408109"
     Region          265..346
                     /region_name="Tudor_SETDB1_rpt1"
                     /note="first Tudor domain found in SET domain bifurcated 1
                     (SETDB1) and similar proteins; cd20382"
                     /db_xref="CDD:410453"
     Site            order(301,304..307)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410453"
     Region          353..422
                     /region_name="Tudor_SETDB1_rpt2"
                     /note="second Tudor domain found in SET domain bifurcated
                     1 (SETDB1) and similar proteins; cd21181"
                     /db_xref="CDD:410548"
     Site            order(362,365,407..410,413..415)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410548"
     Region          597..672
                     /region_name="MBD"
                     /note="Methyl-CpG binding domain; smart00391"
                     /db_xref="CDD:128673"
     Site            order(611,613,615,622,624,633,636,640)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          674..>875
                     /region_name="SET_SETDB1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain bifurcated 1 (SETDB1) and similar
                     proteins; cd10517"
                     /db_xref="CDD:380915"
     Region          <1196..1285
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1213..1218,1226..1228,1257..1260)
                     /site_type="active"
                     /db_xref="CDD:380915"
     CDS             1..1285
                     /gene="SETDB1"
                     /coded_by="XM_041467381.1:147..4004"
                     /db_xref="GeneID:121353495"
ORIGIN      
        1 mdsqdikelq eevmeelgis meelreiidk evensewvrq rkqqleeleq cmrhkeeeva
       61 hvdqliddav ramdkcetla kelysmmglq yresssedea paatevieip deedddvmsv
      121 dsgwkrssss prisrdqsll reamaamrks ardvakfmda vnkktnlqea qkdaqppqep
      181 pgtaqpvtvp aapsndlntd gdlkvgmril gkkrtktwhk gtliaiqpvg agkkykvkfd
      241 nkgksllsgn hiaydyhpsa erhhvgrrvv arykdgnqmw lyagivaetp nvknkdrfli
      301 ffddgyasyv kewelypvcr plkkawedie dvscrdfiee yitaypnrpm vllkngqlik
      361 tewegtwwks rveevdgslv kilflealpm gtagvsfsfp qedrrcewiy rgstrlepmf
      421 smktsastqe kkqsgqtrtr pnvgavrskg pvvqytqdla gagpqykape paarpaspqp
      481 aemecsdtql aqgrkqvakk stsfrpgsvg sghsspsspv lgdtpaagra lpapqhrvps
      541 svpssvpsqp fhgmmdrvpn epsyraplek tfyfphvcny dclarvrpvr sdqyrsrnpl
      601 lipllydfrr mtarrrvnrk mgfhvlyktp cglclrsmhe ierylfetdc dflflemfcl
      661 dpyvlvdrkf qpykpyyyia ditkgkedvp lscvneidnt pppqvayske ripgkgvyin
      721 tsweflvgcd ckdgcrdksr cachqltiqa sgctpggqin pnsgyqhkrl eeclptgvye
      781 cnkrckcnvn mctnrlvqhg lqvrlqlfkt qnkgwgircl ddiakgsfvc iyagkiltdd
      841 fadkeglemg deyfanldhi esvenfkegy esdakcssdn sgvdlkdddd eedntgteel
      901 eesnedssdd nfckdenfga ssvprsyatr rqtrgqrdhg pseaaskdlg ltrplgheep
      961 atappcklpv seeisknkva swlssnnvae sfqdsdsass frvgeggegk avkmeisver
     1021 ekgcastpgd lngeakvakk eepeestkip glsslgrryg ynpcpprleg irrplsgtvl
     1081 lqsrrrslap pptsenvlmv ssstdsdeeh ragqapgtan dsddiqtiss gseeeedkkn
     1141 pssgsgpvkr qvavkstrgf alksthgiai kstplaaadk gesagpvrrs trqfydgeen
     1201 cyiidakleg nlgrylnhsc tpnlfvqnvf vdthdlrfpw vaffaskrir agteltwdyn
     1261 yevgsvegke llcccgaidc rgrll
//
LOCUS       XP_041323316            1285 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323316
VERSION     XP_041323316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1285
                     /product="histone-lysine N-methyltransferase SETDB1
                     isoform X3"
                     /calculated_mol_wt=143553
     Region          199..254
                     /region_name="DUF5604"
                     /note="Domain of unknown function (DUF5604); pfam18300"
                     /db_xref="CDD:408109"
     Region          264..345
                     /region_name="Tudor_SETDB1_rpt1"
                     /note="first Tudor domain found in SET domain bifurcated 1
                     (SETDB1) and similar proteins; cd20382"
                     /db_xref="CDD:410453"
     Site            order(300,303..306)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410453"
     Region          352..421
                     /region_name="Tudor_SETDB1_rpt2"
                     /note="second Tudor domain found in SET domain bifurcated
                     1 (SETDB1) and similar proteins; cd21181"
                     /db_xref="CDD:410548"
     Site            order(361,364,406..409,412..414)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410548"
     Region          596..671
                     /region_name="MBD"
                     /note="Methyl-CpG binding domain; smart00391"
                     /db_xref="CDD:128673"
     Site            order(610,612,614,621,623,632,635,639)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          673..>874
                     /region_name="SET_SETDB1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain bifurcated 1 (SETDB1) and similar
                     proteins; cd10517"
                     /db_xref="CDD:380915"
     Region          <1196..1285
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1213..1218,1226..1228,1257..1260)
                     /site_type="active"
                     /db_xref="CDD:380915"
     CDS             1..1285
                     /gene="SETDB1"
                     /coded_by="XM_041467382.1:147..4004"
                     /db_xref="GeneID:121353495"
ORIGIN      
        1 mdsqdikelq eevmeelgis meelreiidk evensewvrq rkqqleeleq cmrhkeeeva
       61 hvdqliddav ramdkcetla kelysmmglq yresssedea paatevieip deedddvmsv
      121 dsgwkrsssp risrdqsllr eamaamrksa rdvakfmdav nkktnlqeaq kdaqppqepp
      181 gtaqpvtvpa apsndlntdg dlkvgmrilg kkrtktwhkg tliaiqpvga gkkykvkfdn
      241 kgksllsgnh iaydyhpsae rhhvgrrvva rykdgnqmwl yagivaetpn vknkdrflif
      301 fddgyasyvk ewelypvcrp lkkawedied vscrdfieey itaypnrpmv llkngqlikt
      361 ewegtwwksr veevdgslvk ilflealpmg tagvsfsfpq edrrcewiyr gstrlepmfs
      421 mktsastqek kqsgqtrtrp nvgavrskgp vvqytqdlag agpqykapep aarpaspqpa
      481 emecsdtqla qgrkqvakks tsfrpgsvgs ghsspsspvl gdtpaagral papqhrvpss
      541 vpssvpsqpf hgmmdrvpne psyraplekt fyfphvcnyd clarvrpvrs dqyrsrnpll
      601 ipllydfrrm tarrrvnrkm gfhvlyktpc glclrsmhei erylfetdcd flflemfcld
      661 pyvlvdrkfq pykpyyyiad itkgkedvpl scvneidntp ppqvaysker ipgkgvyint
      721 sweflvgcdc kdgcrdksrc achqltiqas gctpggqinp nsgyqhkrle eclptgvyec
      781 nkrckcnvnm ctnrlvqhgl qvrlqlfktq nkgwgircld diakgsfvci yagkiltddf
      841 adkeglemgd eyfanldhie svenfkegye sdakcssdns gvdlkdddde edntgteele
      901 esnedssddn fckdenfgas svprsyatrr qtrgqrdhgp seaaskdlgl trplgheepa
      961 tappcklpvs eeisknkvas wlssnnvaes fqdsdsassf rvgeggegka vkmeisvere
     1021 kgcastpgdl ngeakvakke epeestkipg lsslgrrygy npcpprlegi rrplsgtvll
     1081 qsrrrslapp ptsenvlmvs sstdsdeehr agqapgtand sddiqtissg seeeedkknp
     1141 ssgsagpvkr qvavkstrgf alksthgiai kstplaaadk gesagpvrrs trqfydgeen
     1201 cyiidakleg nlgrylnhsc tpnlfvqnvf vdthdlrfpw vaffaskrir agteltwdyn
     1261 yevgsvegke llcccgaidc rgrll
//
LOCUS       XP_041323318            1282 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323318
VERSION     XP_041323318.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467384.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1282
                     /product="histone-lysine N-methyltransferase SETDB1
                     isoform X4"
                     /calculated_mol_wt=143270
     Region          200..255
                     /region_name="DUF5604"
                     /note="Domain of unknown function (DUF5604); pfam18300"
                     /db_xref="CDD:408109"
     Region          265..346
                     /region_name="Tudor_SETDB1_rpt1"
                     /note="first Tudor domain found in SET domain bifurcated 1
                     (SETDB1) and similar proteins; cd20382"
                     /db_xref="CDD:410453"
     Site            order(301,304..307)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410453"
     Region          353..422
                     /region_name="Tudor_SETDB1_rpt2"
                     /note="second Tudor domain found in SET domain bifurcated
                     1 (SETDB1) and similar proteins; cd21181"
                     /db_xref="CDD:410548"
     Site            order(362,365,407..410,413..415)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410548"
     Region          593..668
                     /region_name="MBD"
                     /note="Methyl-CpG binding domain; smart00391"
                     /db_xref="CDD:128673"
     Site            order(607,609,611,618,620,629,632,636)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          670..>871
                     /region_name="SET_SETDB1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain bifurcated 1 (SETDB1) and similar
                     proteins; cd10517"
                     /db_xref="CDD:380915"
     Region          <1193..1282
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1210..1215,1223..1225,1254..1257)
                     /site_type="active"
                     /db_xref="CDD:380915"
     CDS             1..1282
                     /gene="SETDB1"
                     /coded_by="XM_041467384.1:147..3995"
                     /db_xref="GeneID:121353495"
ORIGIN      
        1 mdsqdikelq eevmeelgis meelreiidk evensewvrq rkqqleeleq cmrhkeeeva
       61 hvdqliddav ramdkcetla kelysmmglq yresssedea paatevieip deedddvmsv
      121 dsgwkrssss prisrdqsll reamaamrks ardvakfmda vnkktnlqea qkdaqppqep
      181 pgtaqpvtvp aapsndlntd gdlkvgmril gkkrtktwhk gtliaiqpvg agkkykvkfd
      241 nkgksllsgn hiaydyhpsa erhhvgrrvv arykdgnqmw lyagivaetp nvknkdrfli
      301 ffddgyasyv kewelypvcr plkkawedie dvscrdfiee yitaypnrpm vllkngqlik
      361 tewegtwwks rveevdgslv kilflealpm gtagvsfsfp qedrrcewiy rgstrlepmf
      421 smktsastqe kkqsgqtrtr pnvgavrskg pvvqytqdla gagpqykape paarpaspqp
      481 aemecsdtql aqgrkqvakk stsfrpgsvg sghsspsspv lgdtpaagra lpapqhrvps
      541 svpsqpfhgm mdrvpnepsy raplektfyf phvcnydcla rvrpvrsdqy rsrnpllipl
      601 lydfrrmtar rrvnrkmgfh vlyktpcglc lrsmheiery lfetdcdflf lemfcldpyv
      661 lvdrkfqpyk pyyyiaditk gkedvplscv neidntpppq vayskeripg kgvyintswe
      721 flvgcdckdg crdksrcach qltiqasgct pggqinpnsg yqhkrleecl ptgvyecnkr
      781 ckcnvnmctn rlvqhglqvr lqlfktqnkg wgirclddia kgsfvciyag kiltddfadk
      841 eglemgdeyf anldhiesve nfkegyesda kcssdnsgvd lkddddeedn tgteeleesn
      901 edssddnfck denfgassvp rsyatrrqtr gqrdhgpsea askdlgltrp lgheepatap
      961 pcklpvseei sknkvaswls snnvaesfqd sdsassfrvg eggegkavkm eisverekgc
     1021 astpgdlnge akvakkeepe estkipglss lgrrygynpc pprlegirrp lsgtvllqsr
     1081 rrslapppts envlmvssst dsdeehragq apgtandsdd iqtissgsee eedkknpssg
     1141 sagpvkrqva vkstrgfalk sthgiaikst plaaadkges agpvrrstrq fydgeencyi
     1201 idaklegnlg rylnhsctpn lfvqnvfvdt hdlrfpwvaf faskriragt eltwdynyev
     1261 gsvegkellc ccgaidcrgr ll
//
LOCUS       XP_041323319            1281 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323319
VERSION     XP_041323319.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467385.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1281
                     /product="histone-lysine N-methyltransferase SETDB1
                     isoform X5"
                     /calculated_mol_wt=143199
     Region          200..255
                     /region_name="DUF5604"
                     /note="Domain of unknown function (DUF5604); pfam18300"
                     /db_xref="CDD:408109"
     Region          265..346
                     /region_name="Tudor_SETDB1_rpt1"
                     /note="first Tudor domain found in SET domain bifurcated 1
                     (SETDB1) and similar proteins; cd20382"
                     /db_xref="CDD:410453"
     Site            order(301,304..307)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410453"
     Region          353..422
                     /region_name="Tudor_SETDB1_rpt2"
                     /note="second Tudor domain found in SET domain bifurcated
                     1 (SETDB1) and similar proteins; cd21181"
                     /db_xref="CDD:410548"
     Site            order(362,365,407..410,413..415)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410548"
     Region          593..668
                     /region_name="MBD"
                     /note="Methyl-CpG binding domain; smart00391"
                     /db_xref="CDD:128673"
     Site            order(607,609,611,618,620,629,632,636)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238689"
     Region          670..>871
                     /region_name="SET_SETDB1"
                     /note="SET domain (including pre-SET and post-SET domains)
                     found in SET domain bifurcated 1 (SETDB1) and similar
                     proteins; cd10517"
                     /db_xref="CDD:380915"
     Region          <1192..1281
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1209..1214,1222..1224,1253..1256)
                     /site_type="active"
                     /db_xref="CDD:380915"
     CDS             1..1281
                     /gene="SETDB1"
                     /coded_by="XM_041467385.1:147..3992"
                     /db_xref="GeneID:121353495"
ORIGIN      
        1 mdsqdikelq eevmeelgis meelreiidk evensewvrq rkqqleeleq cmrhkeeeva
       61 hvdqliddav ramdkcetla kelysmmglq yresssedea paatevieip deedddvmsv
      121 dsgwkrssss prisrdqsll reamaamrks ardvakfmda vnkktnlqea qkdaqppqep
      181 pgtaqpvtvp aapsndlntd gdlkvgmril gkkrtktwhk gtliaiqpvg agkkykvkfd
      241 nkgksllsgn hiaydyhpsa erhhvgrrvv arykdgnqmw lyagivaetp nvknkdrfli
      301 ffddgyasyv kewelypvcr plkkawedie dvscrdfiee yitaypnrpm vllkngqlik
      361 tewegtwwks rveevdgslv kilflealpm gtagvsfsfp qedrrcewiy rgstrlepmf
      421 smktsastqe kkqsgqtrtr pnvgavrskg pvvqytqdla gagpqykape paarpaspqp
      481 aemecsdtql aqgrkqvakk stsfrpgsvg sghsspsspv lgdtpaagra lpapqhrvps
      541 svpsqpfhgm mdrvpnepsy raplektfyf phvcnydcla rvrpvrsdqy rsrnpllipl
      601 lydfrrmtar rrvnrkmgfh vlyktpcglc lrsmheiery lfetdcdflf lemfcldpyv
      661 lvdrkfqpyk pyyyiaditk gkedvplscv neidntpppq vayskeripg kgvyintswe
      721 flvgcdckdg crdksrcach qltiqasgct pggqinpnsg yqhkrleecl ptgvyecnkr
      781 ckcnvnmctn rlvqhglqvr lqlfktqnkg wgirclddia kgsfvciyag kiltddfadk
      841 eglemgdeyf anldhiesve nfkegyesda kcssdnsgvd lkddddeedn tgteeleesn
      901 edssddnfck denfgassvp rsyatrrqtr gqrdhgpsea askdlgltrp lgheepatap
      961 pcklpvseei sknkvaswls snnvaesfqd sdsassfrvg eggegkavkm eisverekgc
     1021 astpgdlnge akvakkeepe estkipglss lgrrygynpc pprlegirrp lsgtvllqsr
     1081 rrslapppts envlmvssst dsdeehragq apgtandsdd iqtissgsee eedkknpssg
     1141 sgpvkrqvav kstrgfalks thgiaikstp laaadkgesa gpvrrstrqf ydgeencyii
     1201 daklegnlgr ylnhsctpnl fvqnvfvdth dlrfpwvaff askriragte ltwdynyevg
     1261 svegkellcc cgaidcrgrl l
//
LOCUS       XP_041323320             636 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETDB1 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323320
VERSION     XP_041323320.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467386.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..636
                     /product="histone-lysine N-methyltransferase SETDB1
                     isoform X6"
                     /calculated_mol_wt=70766
     Region          7..>91
                     /region_name="YkyA"
                     /note="Putative cell-wall binding lipoprotein; pfam10368"
                     /db_xref="CDD:431235"
     Region          200..255
                     /region_name="DUF5604"
                     /note="Domain of unknown function (DUF5604); pfam18300"
                     /db_xref="CDD:408109"
     Region          265..346
                     /region_name="Tudor_SETDB1_rpt1"
                     /note="first Tudor domain found in SET domain bifurcated 1
                     (SETDB1) and similar proteins; cd20382"
                     /db_xref="CDD:410453"
     Site            order(301,304..307)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410453"
     Region          353..422
                     /region_name="Tudor_SETDB1_rpt2"
                     /note="second Tudor domain found in SET domain bifurcated
                     1 (SETDB1) and similar proteins; cd21181"
                     /db_xref="CDD:410548"
     Site            order(362,365,407..410,413..415)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410548"
     Region          578..626
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(580,583,596,598,601,604,616,619)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..636
                     /gene="SETDB1"
                     /coded_by="XM_041467386.1:147..2057"
                     /db_xref="GeneID:121353495"
ORIGIN      
        1 mdsqdikelq eevmeelgis meelreiidk evensewvrq rkqqleeleq cmrhkeeeva
       61 hvdqliddav ramdkcetla kelysmmglq yresssedea paatevieip deedddvmsv
      121 dsgwkrssss prisrdqsll reamaamrks ardvakfmda vnkktnlqea qkdaqppqep
      181 pgtaqpvtvp aapsndlntd gdlkvgmril gkkrtktwhk gtliaiqpvg agkkykvkfd
      241 nkgksllsgn hiaydyhpsa erhhvgrrvv arykdgnqmw lyagivaetp nvknkdrfli
      301 ffddgyasyv kewelypvcr plkkawedie dvscrdfiee yitaypnrpm vllkngqlik
      361 tewegtwwks rveevdgslv kilflealpm gtagvsfsfp qedrrcewiy rgstrlepmf
      421 smktsastqe kkqsgqtrtr pnvgavrskg pvvqytqdla gagpqykape paarpaspqp
      481 aemerwppaa lcpstwtdll adlagnsgsa vgpgghgaih gqaaargprg tfpelqaegg
      541 leeggtrlgd egsvledtre pgnvlgdllg egealpvhfc qrcgfpvrif grlapcqhvf
      601 csdcallvgh eggrtcprcq qpvqevnlys pqafqv
//
LOCUS       XP_041323321             307 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ras-related protein Rab-13-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323321
VERSION     XP_041323321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467387.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..307
                     /product="LOW QUALITY PROTEIN: ras-related protein
                     Rab-13-like"
                     /calculated_mol_wt=33348
     Region          6..157
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(17..23,66,111..112,114,136..138)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            44..46
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(65..66,82..83)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            111..114
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            136..138
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          206..304
                     /region_name="JTB"
                     /note="Jumping translocation breakpoint protein (JTB);
                     pfam05439"
                     /db_xref="CDD:398872"
     CDS             1..307
                     /gene="LOC121353496"
                     /coded_by="XM_041467387.1:74..997"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121353496"
ORIGIN      
        1 makaydhlfk llligdsgvg ktclvirfae dnfsstyist igidfkirtv didgkkiklq
       61 vwdtagqerf ktittayyrg avgivlvydi tdeksfeniq nwmksikevg ggipltggrx
      121 vaqlakehgi rffetsakss qnveeafrtl ardilhksfr kappgsssra llepgpprka
      181 ggrcslgpaa aaaaaseerp aspavatpcw rveqfvvaqe ctrcsgfemk tipacgptgf
      241 iekincassh rdeykscrsa alearrfwrf vgsalgvaaa aaalvvlrqr vldrralekv
      301 rkqiesi
//
LOCUS       XP_041323322             331 aa            linear   VRT 06-MAY-2021
DEFINITION  cathepsin S-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323322
VERSION     XP_041323322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="cathepsin S-like"
                     /calculated_mol_wt=36342
     Region          28..86
                     /region_name="Inhibitor_I29"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     smart00848"
                     /db_xref="CDD:214853"
     Region          116..330
                     /region_name="Peptidase_C1"
                     /note="Papain family cysteine protease; pfam00112"
                     /db_xref="CDD:425470"
     Site            order(134,140,278,298)
                     /site_type="active"
                     /db_xref="CDD:239068"
     Site            order(184..185,251,276,279,325)
                     /site_type="active"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     CDS             1..331
                     /gene="LOC121353497"
                     /coded_by="XM_041467388.1:203..1198"
                     /db_xref="GeneID:121353497"
ORIGIN      
        1 meplapaall allvlalghp dpaldrhwel wkksygkeyh pqedflrrlt weknlwlvtl
       61 hnlehslglr symlgmnhlg dmtseevaas ltrlqirprp rrnsafpaqf rplgdipeel
      121 dwrdkgcvte vknqgacgsc wafsavgale aqvklktgnl vslsaqnlvd csgmygnkgc
      181 aggfmteafq yiidnggies eesypytaqn gtchynasar aascsrflel pegdeaalrd
      241 avatvgpvav aidatrpsff lyrsgvfddp qcsqevnhgv lvvgygslen keywlvknsw
      301 gvhfgdagyi rmarnasnlc giasyasypl i
//
LOCUS       XP_041323323             331 aa            linear   VRT 06-MAY-2021
DEFINITION  cathepsin S-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323323
VERSION     XP_041323323.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467389.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="cathepsin S-like"
                     /calculated_mol_wt=36342
     Region          28..86
                     /region_name="Inhibitor_I29"
                     /note="Cathepsin propeptide inhibitor domain (I29);
                     smart00848"
                     /db_xref="CDD:214853"
     Region          116..330
                     /region_name="Peptidase_C1"
                     /note="Papain family cysteine protease; pfam00112"
                     /db_xref="CDD:425470"
     Site            order(134,140,278,298)
                     /site_type="active"
                     /db_xref="CDD:239068"
     Site            order(184..185,251,276,279,325)
                     /site_type="active"
                     /note="S2 subsite [active]"
                     /db_xref="CDD:239068"
     CDS             1..331
                     /gene="LOC121353497"
                     /coded_by="XM_041467389.1:173..1168"
                     /db_xref="GeneID:121353497"
ORIGIN      
        1 meplapaall allvlalghp dpaldrhwel wkksygkeyh pqedflrrlt weknlwlvtl
       61 hnlehslglr symlgmnhlg dmtseevaas ltrlqirprp rrnsafpaqf rplgdipeel
      121 dwrdkgcvte vknqgacgsc wafsavgale aqvklktgnl vslsaqnlvd csgmygnkgc
      181 aggfmteafq yiidnggies eesypytaqn gtchynasar aascsrflel pegdeaalrd
      241 avatvgpvav aidatrpsff lyrsgvfddp qcsqevnhgv lvvgygslen keywlvknsw
      301 gvhfgdagyi rmarnasnlc giasyasypl i
//
LOCUS       XP_041323324             305 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc transporter ZIP1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323324
VERSION     XP_041323324.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467390.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="zinc transporter ZIP1 isoform X1"
                     /calculated_mol_wt=30996
     Region          44..300
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; cl00437"
                     /db_xref="CDD:444905"
     CDS             1..305
                     /gene="SLC39A1"
                     /coded_by="XM_041467390.1:445..1362"
                     /db_xref="GeneID:121353498"
ORIGIN      
        1 mdtgtgasla wspgaasqpp pglavklgsl vlllllplac glaplwcfrq ppdprspvls
       61 lvscfsggvf mgtflldllp dylgsiaaal eglrvtlqfp lpefilamgf flvlvleqat
      121 laqrelaepp eesrallpga siqaaapvgs aapggrgalr agalalalal havleglalg
      181 lregeaaalr vllalllhkg avafglslel lrsrlrppav asclallalm splgvgvgta
      241 laagagprqr lcravlegla agtflfvtfl eilpqelgap gnripkvili lagfalvsav
      301 lfvkg
//
LOCUS       XP_041323325             303 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc transporter ZIP1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323325
VERSION     XP_041323325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467391.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="zinc transporter ZIP1 isoform X2"
                     /calculated_mol_wt=30755
     Region          44..298
                     /region_name="Zip"
                     /note="ZIP Zinc transporter; cl00437"
                     /db_xref="CDD:444905"
     CDS             1..303
                     /gene="SLC39A1"
                     /coded_by="XM_041467391.1:445..1356"
                     /db_xref="GeneID:121353498"
ORIGIN      
        1 mdtgtgasla wspgaasqpp pglavklgsl vlllllplac glaplwcfrq ppdprspvls
       61 lvscfsggvf mgtflldllp dylgsiaaal eglrvtfplp efilamgffl vlvleqatla
      121 qrelaeppee srallpgasi qaaapvgsaa pggrgalrag alalalalha vleglalglr
      181 egeaaalrvl lalllhkgav afglslellr srlrppavas clallalmsp lgvgvgtala
      241 agagprqrlc ravleglaag tflfvtflei lpqelgapgn ripkvilila gfalvsavlf
      301 vkg
//
LOCUS       XP_041323326             305 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: cyclic AMP-responsive element-binding protein
            3-like protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323326
VERSION     XP_041323326.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467392.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="LOW QUALITY PROTEIN: cyclic AMP-responsive
                     element-binding protein 3-like protein 4"
                     /calculated_mol_wt=31681
     Region          125..185
                     /region_name="bZIP_CREB3"
                     /note="Basic leucine zipper (bZIP) domain of Cyclic
                     AMP-responsive element-binding protein 3 (CREB3) and
                     similar proteins: a DNA-binding and dimerization domain;
                     cd14689"
                     /db_xref="CDD:269837"
     Region          127..178
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269837"
     Site            order(130..131,133..135,137..142,144..146)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269837"
     Site            order(145,148..149,152..153,155..156,159..160,162..163,
                     166..167,169..170,173..174,176..177)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269837"
     CDS             1..305
                     /gene="CREB3L4"
                     /coded_by="XM_041467392.1:140..1057"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121353499"
ORIGIN      
        1 meapelpepd glfpdpaslp vpvlsfqtlt lpeddgsgae ellgltvnpd iacglgtgpe
       61 pprpegtppv llevvcdlst pllpsllpgi qlaptqvrag trxgsggpgg dssdpsvlqa
      121 eerllkkvrr kirnkqsaqd srrrkkeyld elesraaacs alnqelrkkv qeletsngsl
      181 lrqlqalike tsgkpaqtgt cvlilflslg lillpssspf rrggsrdglg ptgvisrnil
      241 arrepgaaae spfprwipgp epgagvedga gggpgdgipt pprdpgsnss rqdmgtgtrg
      301 hgdem
//
LOCUS       XP_041323327              84 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S27 [Pyrgilauda ruficollis].
ACCESSION   XP_041323327
VERSION     XP_041323327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="40S ribosomal protein S27"
                     /calculated_mol_wt=9330
     Region          6..82
                     /region_name="PLN00209"
                     /note="ribosomal protein S27; Provisional"
                     /db_xref="CDD:165774"
     CDS             1..84
                     /gene="RPS27"
                     /coded_by="XM_041467393.1:81..335"
                     /db_xref="GeneID:121353500"
ORIGIN      
        1 mplakdllhp speeekrkhk kkrlvqspns yfmdvkcpgc ykittvfsha qtvvlcvgcs
       61 tvlcqptggk arltegcsfr rkqh
//
LOCUS       XP_041323328             121 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323328
VERSION     XP_041323328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..121
                     /product="scale keratin-like"
                     /calculated_mol_wt=12100
     Region          3..>67
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..121
                     /gene="LOC121353501"
                     /coded_by="XM_041467394.1:1..366"
                     /db_xref="GeneID:121353501"
ORIGIN      
        1 mscydlcppr tsvavpqpia escnelcarq cpdssafiqp ppvvvtfpgp ilssfpqqav
       61 vgssgapafg gslglgglyg agatqasggl ctfgrayaap acspcalpry skklwdtcgp
      121 c
//
LOCUS       XP_041323330             101 aa            linear   VRT 06-MAY-2021
DEFINITION  feather beta keratin [Pyrgilauda ruficollis].
ACCESSION   XP_041323330
VERSION     XP_041323330.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467396.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="feather beta keratin"
                     /calculated_mol_wt=10145
     Region          3..77
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..101
                     /gene="LOC121353502"
                     /coded_by="XM_041467396.1:58..363"
                     /db_xref="GeneID:121353502"
ORIGIN      
        1 mscydlcrpc gptplanscn epcvrqcqds rviiepspvv vtlpgpilss fpqntavgss
       61 tsaavgsils esgvpinsgg fglsglsglg grycgrrclp c
//
LOCUS       XP_041323331             101 aa            linear   VRT 06-MAY-2021
DEFINITION  feather beta keratin [Pyrgilauda ruficollis].
ACCESSION   XP_041323331
VERSION     XP_041323331.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467397.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="feather beta keratin"
                     /calculated_mol_wt=10145
     Region          3..77
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..101
                     /gene="LOC121353503"
                     /coded_by="XM_041467397.1:1..306"
                     /db_xref="GeneID:121353503"
ORIGIN      
        1 mscydlcrpc gptplanscn epcvrqcqds rviiepspvv vtlpgpilss fpqntavgss
       61 tsaavgsils esgvpinsgg fglsglsglg grycgrrclp c
//
LOCUS       XP_041323332             101 aa            linear   VRT 06-MAY-2021
DEFINITION  feather keratin 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323332
VERSION     XP_041323332.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467398.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="feather keratin 1"
                     /calculated_mol_wt=10130
     Region          3..77
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..101
                     /gene="LOC121353504"
                     /coded_by="XM_041467398.1:58..363"
                     /db_xref="GeneID:121353504"
ORIGIN      
        1 mscydlcrpc gptplanscn epcvrqcqds rvviqpspvv vtlpgpilss fpqntavgss
       61 tsaavgsils esgvpinsgg fglsglsglg grycgrrclp c
//
LOCUS       XP_041323333             101 aa            linear   VRT 06-MAY-2021
DEFINITION  feather keratin 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323333
VERSION     XP_041323333.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467399.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="feather keratin 1-like"
                     /calculated_mol_wt=10168
     Region          3..77
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..101
                     /gene="LOC121353505"
                     /coded_by="XM_041467399.1:58..363"
                     /db_xref="GeneID:121353505"
ORIGIN      
        1 mscydlcrpc gptplanscn epcvrqcqds rvviqpspvv vplpgpilss fpqntavgss
       61 tsaavgsils eegvpinsgg fglsglsglg grycgrrclp c
//
LOCUS       XP_041323334             384 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin enhancer-binding factor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323334
VERSION     XP_041323334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="interleukin enhancer-binding factor 2"
                     /calculated_mol_wt=42440
     Region          92..332
                     /region_name="DZF"
                     /note="domain in DSRM or ZnF_C2H2 domain containing
                     proteins; smart00572"
                     /db_xref="CDD:128842"
     CDS             1..384
                     /gene="ILF2"
                     /coded_by="XM_041467400.1:71..1225"
                     /db_xref="GeneID:121353506"
ORIGIN      
        1 mrgdrgrgrg grfgsrfrpf vphipfdfyv cemafprvkp aadetafsea llkrnqdlap
       61 taaeqasils lvtkinnvid nlivapgtfe vqieevrqvg sykkgtmttg hnvadlvvil
      121 kilptleava algnkvvesl raqdpsevlt mltnetgfei ssadatvkil ittvppnlrk
      181 ldpelhldik vlqsalaair harwfeenas qstvkvlirl lkdlrirfpg fepltpwild
      241 llghyavmnn ptrqplalni ayrrclqila aglflpgsvg itdpcesgnf rvhtvmtleq
      301 qdmvcytaqt lvrilshggy rkilgqegda sylasemstw dgvivtpsek ayekppekke
      361 geeeeenqee paageeeesm etqe
//
LOCUS       XP_041323335             384 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin enhancer-binding factor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323335
VERSION     XP_041323335.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467401.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="interleukin enhancer-binding factor 2"
                     /calculated_mol_wt=42440
     Region          92..332
                     /region_name="DZF"
                     /note="domain in DSRM or ZnF_C2H2 domain containing
                     proteins; smart00572"
                     /db_xref="CDD:128842"
     CDS             1..384
                     /gene="ILF2"
                     /coded_by="XM_041467401.1:72..1226"
                     /db_xref="GeneID:121353506"
ORIGIN      
        1 mrgdrgrgrg grfgsrfrpf vphipfdfyv cemafprvkp aadetafsea llkrnqdlap
       61 taaeqasils lvtkinnvid nlivapgtfe vqieevrqvg sykkgtmttg hnvadlvvil
      121 kilptleava algnkvvesl raqdpsevlt mltnetgfei ssadatvkil ittvppnlrk
      181 ldpelhldik vlqsalaair harwfeenas qstvkvlirl lkdlrirfpg fepltpwild
      241 llghyavmnn ptrqplalni ayrrclqila aglflpgsvg itdpcesgnf rvhtvmtleq
      301 qdmvcytaqt lvrilshggy rkilgqegda sylasemstw dgvivtpsek ayekppekke
      361 geeeeenqee paageeeesm etqe
//
LOCUS       XP_041323336             119 aa            linear   VRT 06-MAY-2021
DEFINITION  feather keratin 4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323336
VERSION     XP_041323336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..119
                     /product="feather keratin 4-like"
                     /calculated_mol_wt=12036
     Region          3..>58
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..119
                     /gene="LOC121353507"
                     /coded_by="XM_041467402.1:1..360"
                     /db_xref="GeneID:121353507"
ORIGIN      
        1 mscyercppt scgptplans cnepcvrqcq dstvviqpsp vvvtlpgpil ssfpqnttvg
       61 ssasaavgsa lsaegvpins gsslsfggfg gfgypglgsg ysrpyrrynt srsgfygpc
//
LOCUS       XP_041323337             116 aa            linear   VRT 06-MAY-2021
DEFINITION  feather keratin 4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323337
VERSION     XP_041323337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467403.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..116
                     /product="feather keratin 4-like"
                     /calculated_mol_wt=11624
     Region          3..79
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..116
                     /gene="LOC121353508"
                     /coded_by="XM_041467403.1:1..351"
                     /db_xref="GeneID:121353508"
ORIGIN      
        1 mscydlcapt scgptplans cnepcvrqcq dstvviqpsp vvvtlpgpil ssfpqnttvg
       61 ssasaavgsa lsaggvpins gsslsfggfg gfgypglgsg ysrpyrrynt srsgfy
//
LOCUS       XP_041323338              87 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S21, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041323338
VERSION     XP_041323338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467404.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..87
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..87
                     /product="28S ribosomal protein S21, mitochondrial"
                     /calculated_mol_wt=9929
     Region          11..>49
                     /region_name="Ribosomal_S21"
                     /note="Ribosomal protein S21; pfam01165"
                     /db_xref="CDD:460092"
     CDS             1..87
                     /gene="MRPS21"
                     /coded_by="XM_041467404.1:96..359"
                     /db_xref="GeneID:121353510"
ORIGIN      
        1 manhlrfvgr tvmvqngnve aaygvlnril aqdgvadavr rsryyekpsr arrrrafeac
       61 rrvycaemar riafltrsar qdpwpgc
//
LOCUS       XP_041323339             101 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323339
VERSION     XP_041323339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467405.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="protein S100-A4-like"
                     /calculated_mol_wt=11746
     Region          4..90
                     /region_name="S-100"
                     /note="S-100 domain, which represents the largest family
                     within the superfamily of proteins carrying the Ca-binding
                     EF-hand motif. Note that this S-100 hierarchy contains
                     only S-100 EF-hand domains, other EF-hands have been
                     modeled separately. S100 proteins are...; cd00213"
                     /db_xref="CDD:238131"
     Site            order(4..20,26..28,37..38,40..42,70..73,75..76,78..81,
                     83..90)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(20,25,28,33..34,63,65,67,69,71,74)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..101
                     /gene="LOC121353511"
                     /coded_by="XM_041467405.1:134..439"
                     /db_xref="GeneID:121353511"
ORIGIN      
        1 macpleqama lmvttfhkys akegdkykls kaelkellnk elpvfgskqm deaefrrlmn
       61 dldhnkdsev dfkeyvcfla citmgfneff kddpskqhrr k
//
LOCUS       XP_041323340             100 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323340
VERSION     XP_041323340.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467406.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..100
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..100
                     /product="protein S100-A4-like"
                     /calculated_mol_wt=11307
     Region          4..89
                     /region_name="S-100"
                     /note="S-100 domain, which represents the largest family
                     within the superfamily of proteins carrying the Ca-binding
                     EF-hand motif. Note that this S-100 hierarchy contains
                     only S-100 EF-hand domains, other EF-hands have been
                     modeled separately. S100 proteins are...; cd00213"
                     /db_xref="CDD:238131"
     Site            order(4..20,26..28,37..38,40..42,69..72,74..75,77..80,
                     82..89)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(20,25,28,33..34,62,64,66,68,70,73)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..100
                     /gene="LOC121353512"
                     /coded_by="XM_041467406.1:379..681"
                     /db_xref="GeneID:121353512"
ORIGIN      
        1 macpleqala vvvatfhkys gnegdkykln kaelkelltk elpsfskqts easlqklmsn
       61 ldcnsdnevd fqeyvtflac mammcneffq dlpdkmprrk
//
LOCUS       XP_041323342             106 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A16 [Pyrgilauda ruficollis].
ACCESSION   XP_041323342
VERSION     XP_041323342.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467408.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..106
                     /product="protein S100-A16"
                     /calculated_mol_wt=12208
     Region          5..100
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(5..22,31..33,42..43,45..47,75..78,80..81,83..86,
                     88..95)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240149"
     Site            order(22,30,33,38..39,68,70,72,74,76,79)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:240149"
     CDS             1..106
                     /gene="S100A16"
                     /coded_by="XM_041467408.1:166..486"
                     /db_xref="GeneID:121353513"
ORIGIN      
        1 maectelewa vqvlvnnfdk yssrcccckn prriskkdfr kmlsrelnhm ltdtgnrraa
       61 dklicdlden kdgrisfeey wtliggiasp iaqiirqqeq svkhtk
//
LOCUS       XP_041323343             815 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: semaphorin-6C [Pyrgilauda ruficollis].
ACCESSION   XP_041323343
VERSION     XP_041323343.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467409.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..815
                     /product="LOW QUALITY PROTEIN: semaphorin-6C"
                     /calculated_mol_wt=85742
     Region          52..515
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          516..558
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     Region          <578..791
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..815
                     /gene="SEMA6C"
                     /coded_by="XM_041467409.1:508..2955"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon;
                     substituted 2 bases at 2 genomic stop codons"
                     /db_xref="GeneID:121353514"
ORIGIN      
        1 mpgvpllfvl llllllmagt paqsfprdlv arstvglaat aayprfgglr gdngtarlgl
       61 dfqrmlrlng tlfvaardhi yafdlrqdkg tlyperhltw etqdrencam rgrrqdechn
      121 yirvlvprda etllacgtna fsplcrtyqv sslaqqgdev sgqarcpfda kqsivalfvd
      181 gslysatvad fqasdaviyr slspgqaplr tlkyssrwlq gtpkwgpxgc pgadpgwcpg
      241 adpqgaqvlt lrmprcxpgc pgadprccag avarvarvcr ndrggsprvl errwtsflkv
      301 rlqcsipgdt vfyfdvleav tppqtlhgrp avlalfgtqp nsipgsavca fyladversf
      361 egpfaeprgt twtpvpeerv pqprpgccag mgpaagvvts gdfpdetlvf akehpllhga
      421 vgpaggrplf thtgtrltql avdtgagprg nqtvlflgae dgrllkvlaa aqspeatqpp
      481 ggtpapggtr epgdsrdssg ktllleeisl ydpgrsclaa rdpycvwlps rgcvpfsedl
      541 psgfqqdveg slgisgtcqg aaedsdedgd lahgvrhpgp eaestvpvpv lvgcvlgafa
      601 lgalatglva tccqrpavpk appeppcapr tptqtpvprl ypalpprdpp epepeppalp
      661 paraprdrep rrgpaeppgp gppgraaree mpqrlpggsg wpvtppgtgs ftnrvlprsa
      721 gpgppfgphd rapvrldvpp dsppaprrpl aqsrslggtp vsppgpprgl trmhslgtpg
      781 gtpwgprpga lerslsmkpp vlpkplllpa apgrh
//
LOCUS       XP_041323344             246 aa            linear   VRT 06-MAY-2021
DEFINITION  chromatin target of PRMT1 protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323344
VERSION     XP_041323344.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467410.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="chromatin target of PRMT1 protein isoform X1"
                     /calculated_mol_wt=25803
     Region          <206..241
                     /region_name="FoP_duplication"
                     /note="C-terminal duplication domain of Friend of PRMT1;
                     pfam13865"
                     /db_xref="CDD:464005"
     CDS             1..246
                     /gene="LOC121353515"
                     /coded_by="XM_041467410.1:193..933"
                     /db_xref="GeneID:121353515"
ORIGIN      
        1 maaqsapkvv lksttkmsln erftnmlknk qpmpvnirat mqqqqlasar nrrlaqqmen
       61 rpsvqaalkl kqkslkqrlg ksniqarlgr pagtlargal ggrglalgqr gmprgalrgr
      121 garamirggv alrgqgllrg grgiaprmgl rrggirgrgg pgrgglgrga mgrggiggrg
      181 rgmagrgrgg fggrgrgrgr grgsarpalt keqldnqlda ymsktkghld aeldaymaqt
      241 dpeaad
//
LOCUS       XP_041323345             245 aa            linear   VRT 06-MAY-2021
DEFINITION  chromatin target of PRMT1 protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323345
VERSION     XP_041323345.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467411.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="chromatin target of PRMT1 protein isoform X2"
                     /calculated_mol_wt=25675
     Region          <205..240
                     /region_name="FoP_duplication"
                     /note="C-terminal duplication domain of Friend of PRMT1;
                     pfam13865"
                     /db_xref="CDD:464005"
     CDS             1..245
                     /gene="LOC121353515"
                     /coded_by="XM_041467411.1:195..932"
                     /db_xref="GeneID:121353515"
ORIGIN      
        1 maaqsapkvv lksttkmsln erftnmlknk qpmpvnirat mqqqqlasar nrrlaqqmen
       61 rpsvqaalkl kqslkqrlgk sniqarlgrp agtlargalg grglalgqrg mprgalrgrg
      121 aramirggva lrgqgllrgg rgiaprmglr rggirgrggp grgglgrgam grggiggrgr
      181 gmagrgrggf ggrgrgrgrg rgsarpaltk eqldnqlday msktkghlda eldaymaqtd
      241 peaad
//
LOCUS       XP_041323346             199 aa            linear   VRT 06-MAY-2021
DEFINITION  chromatin target of PRMT1 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323346
VERSION     XP_041323346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..199
                     /product="chromatin target of PRMT1 protein isoform X3"
                     /calculated_mol_wt=20860
     CDS             1..199
                     /gene="LOC121353515"
                     /coded_by="XM_041467412.1:194..793"
                     /db_xref="GeneID:121353515"
ORIGIN      
        1 maaqsapkvv lksttkmsln erftnmlknk qpmpvnirat mqqqqlasar nrrlaqqmen
       61 rpsvqaalkl kqkslkqrlg ksniqarlgr pagtlargal ggrglalgqr gmprgalrgr
      121 garamirggv alrgqgllrg grgiaprmgl rrggirgrgg pgrgglgrga mgrggiggra
      181 adtlfsklla pqelakdcs
//
LOCUS       XP_041323347             190 aa            linear   VRT 06-MAY-2021
DEFINITION  chromatin target of PRMT1 protein isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323347
VERSION     XP_041323347.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467413.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="chromatin target of PRMT1 protein isoform X4"
                     /calculated_mol_wt=20553
     CDS             1..190
                     /gene="LOC121353515"
                     /coded_by="XM_041467413.1:199..771"
                     /db_xref="GeneID:121353515"
ORIGIN      
        1 maaqsapkvv lksttkmsln erftnmlknk qpmpvnirat mqqqqlasar nrrlaqqmen
       61 rpsvqaalkl kqvrgkriwa lqdvektape rergqrregd ggekadpgvr ellhltvpki
      121 ppslgsrcca afslrssgas sragrsgtqa wtpgttpalg tasllcpcgv pnprslhdsc
      181 psqifssrra
//
LOCUS       XP_041323348             182 aa            linear   VRT 06-MAY-2021
DEFINITION  chromatin target of PRMT1 protein isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323348
VERSION     XP_041323348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467414.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="chromatin target of PRMT1 protein isoform X5"
                     /calculated_mol_wt=19071
     CDS             1..182
                     /gene="LOC121353515"
                     /coded_by="XM_041467414.1:194..742"
                     /db_xref="GeneID:121353515"
ORIGIN      
        1 maaqsapkvv lksttkmsln erftnmlknk qpmpvnirat mqqqqlasar nrrlaqqmen
       61 rpsvqaalkl kqkslkqrlg ksniqarlgr pagtlargal ggrglalgqr gmprgalrgr
      121 garamirggv alrgqgllrg grgiaprmgl rrggirgrgg pgrgglgrga mgrggiggrg
      181 wa
//
LOCUS       XP_041323349              75 aa            linear   VRT 06-MAY-2021
DEFINITION  chromatin target of PRMT1 protein isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323349
VERSION     XP_041323349.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467415.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..75
                     /product="chromatin target of PRMT1 protein isoform X6"
                     /calculated_mol_wt=8391
     CDS             1..75
                     /gene="LOC121353515"
                     /coded_by="XM_041467415.1:196..423"
                     /db_xref="GeneID:121353515"
ORIGIN      
        1 maaqsapkvv lksttkmsln erftnmlknk qpmpvnirat mqqqqlasar nrrlaqqmen
       61 rpsvqaalkl kqrkg
//
LOCUS       XP_041323350             310 aa            linear   VRT 06-MAY-2021
DEFINITION  ceramide synthase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323350
VERSION     XP_041323350.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467416.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="ceramide synthase 2"
                     /calculated_mol_wt=36424
     Region          71..128
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(71..74,76,94,100,113,115..116,119..120,122..124,
                     126..127)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(72,75,116,119..120,123)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          131..266
                     /region_name="TRAM_LAG1_CLN8"
                     /note="TLC domain; cl02759"
                     /db_xref="CDD:470668"
     CDS             1..310
                     /gene="CERS2"
                     /coded_by="XM_041467416.1:432..1364"
                     /db_xref="GeneID:121353517"
ORIGIN      
        1 mfqtlysyfw werlwlpanl twadledrdg rvyakasdly itlplaflfl vvrhlfetyv
       61 atplagllnv kekvrlkatp navlekfyaa tskhpkqadv emlskksgct vrqverwfrr
      121 rrnqdrpsll kkfreaswrf tfyliafiag mavivdkpwf ydlrevwkgy piqvsmdpip
      181 afpdhqdlqw qlevqwgslg ggwdagsard rmafpgrimh ctmfyplely paffgyyffn
      241 fmmvvlqslh ifwayliirm aqkfitgkvv edersdreet dnseeeeeva kngplsnghp
      301 vlnnnhrktd
//
LOCUS       XP_041323351             304 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleoside diphosphate-linked moiety X motif 17 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323351
VERSION     XP_041323351.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467417.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..304
                     /product="nucleoside diphosphate-linked moiety X motif 17"
                     /calculated_mol_wt=31399
     Region          94..223
                     /region_name="NUDIX_Nudt17"
                     /note="nucleoside diphosphate-linked moiety X)) motif 17;
                     cd04694"
                     /db_xref="CDD:467576"
     CDS             1..304
                     /gene="NUDT17"
                     /coded_by="XM_041467417.1:1..915"
                     /db_xref="GeneID:121353518"
ORIGIN      
        1 magarvlvhv rragaggaaa fgqsvtgvfc pahtdaapvs cglqrghfli sdvpfpgssv
       61 tvlkrppfcp aklggdtpgg rggqpgvaaa vavlleatcg hvlltrraat lrhfpnvwvp
      121 pgghlepgee lvaaglrela eetglhlepg tfswhllglw eslfppslsw gpprchhivt
      181 ylglrsaepr qqlqarlcps pcevsavawl eprlleaiaa tedgaegpgp gsgsgsgpgs
      241 fprelpatvg itelsaggfr ssriptgill rrapahgpdl ervstgtkfa lgrwraglgw
      301 gqqg
//
LOCUS       XP_041323352             788 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat domain-containing protein 35 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323352
VERSION     XP_041323352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467418.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..788
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..788
                     /product="ankyrin repeat domain-containing protein 35"
                     /calculated_mol_wt=85326
     Region          110..285
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(139,141,145..146,149..151,153..154,158,161,170,172,
                     174,178..179,182..184,186..187,191,194,203,205,207,
                     211..212,215..217,219..220,224,227,236)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          139..170
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          172..203
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <177..704
                     /region_name="PksD"
                     /note="Acyl transferase domain in polyketide synthase
                     (PKS) enzymes [Secondary metabolites biosynthesis,
                     transport and catabolism]; COG3321"
                     /db_xref="CDD:442550"
     Region          205..236
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <421..>553
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..788
                     /gene="ANKRD35"
                     /coded_by="XM_041467418.1:1..2367"
                     /db_xref="GeneID:121353519"
ORIGIN      
        1 mkrvggggra edaaperrlp gvpqpgggre rrgggpgapa agvpgvpamk rmfscsssqv
       61 tdredlgklr hdmrggtrtg gdpvpgwglg scpgfgvpqv eswtrqdqkl leavtrgdva
      121 rvaalaarka arpaklnarg qsalhlaaag gltecltlll ehgapvngtn ddgstalhla
      181 tiacqpqcvk vllqhganer hvdgqnrtpl hwaassgcas svlllcdhea pldvpdallr
      241 rgaepgladr dgrtalelal ahgslevael lqghkrdkdt gnvtgsvtgq apswalqkip
      301 dcgrrengag qvgiqgeeee eeeeeqrdgr aarrlreela rktlecrrle eaaegirrrl
      361 relvrllpar dagedeedee ddgaclellt rrvaelrkrt rdeewqggqg sgeapalipf
      421 lawlgeecsk mreakagafs rsrelrgeae nsprdqaweq laagleqale qqdqiharml
      481 qgsqtllekl rrepvnatep aaggknreei paesgrmeke llelregngk llvelarlgr
      541 ererlqrelr elrdpgnrde arrlrrelra lrdglgarvr eaggdagaai vrdlhrrlda
      601 lvrsqhealq litemegepg espgsdgegg tpgepgggae qgpergtagv ppgseaerwr
      661 eaaaaaeera agrerelrel retaegless laalreraar leracrdkdg klkqllvete
      721 klsaevlglr grsarlqlql evqqkqhrdt vavyrshllh aaqgfmdqgv haallrilra
      781 eagaglwh
//
LOCUS       XP_041323354             525 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 2-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323354
VERSION     XP_041323354.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467420.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..525
                     /product="rho guanine nucleotide exchange factor 2-like"
                     /calculated_mol_wt=58244
     Region          22..82
                     /region_name="C1_ARHGEF2"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Rho guanine nucleotide exchange factor 2
                     (ARHGEF2) and similar proteins; cd20877"
                     /db_xref="CDD:410427"
     Region          224..>311
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cl02571"
                     /db_xref="CDD:470622"
     Region          <339..414
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     CDS             1..525
                     /gene="LOC121353520"
                     /coded_by="XM_041467420.1:532..2109"
                     /db_xref="GeneID:121353520"
ORIGIN      
        1 mtgktkgkdk ermkeakekd arytnghlft tisvsgmtmc facnksitak ealvcptcnv
       61 tihnrckdtl pnctkvkqkq qkaallknss alqsvslrnk nairerpnsa iypsesfrqt
      121 llgprrgrps lslsksvstt nisgtfndds plgirrilsq stdslnmrnr tlsveslide
      181 gpdvilsqll sdleadgkef eadswslavd nsflqqhrmd vmkrqdviye lmqtelhhvr
      241 tlkimgalfr ramleelqld pgtvqrifpc ldelshiher flaqllerrr eslaqdsnkn
      301 fvidrlgdil vtqvgsaesg ggrvregpgc sfvrvpatyt fpvldkpavi slqnlivrdi
      361 anqekgmfli saappemyev haasrddrnh wmkviqqavs lcpsrqdfpl ieteteaslr
      421 klkgggsslc ipscashpls hasapavlpf hppafpgard elefratdpe rlregedtld
      481 vlledegglg grhsppaspr dflrmqdipe evensqelke gdgds
//
LOCUS       XP_041323355             621 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: CREB-regulated transcription coactivator 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323355
VERSION     XP_041323355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467421.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..621
                     /product="LOW QUALITY PROTEIN: CREB-regulated
                     transcription coactivator 2"
                     /calculated_mol_wt=64601
     Region          156..315
                     /region_name="TORC_M"
                     /note="Transducer of regulated CREB activity middle
                     domain; pfam12885"
                     /db_xref="CDD:463739"
     Region          <587..620
                     /region_name="TORC_C"
                     /note="Transducer of regulated CREB activity, C terminus;
                     pfam12886"
                     /db_xref="CDD:463740"
     CDS             1..621
                     /gene="CRTC2"
                     /coded_by="XM_041467421.1:274..2139"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121353521"
ORIGIN      
        1 mhppaggnav regelgvpgc glrgagppkt pvtcppsvsp qlqaqklrla hsrgpfysgs
       61 lpnvnqigtg gpefqgpspl dstrstrhhg lvervqrdpr rmmsplrryv rqidsspygp
      121 tylspppeps wrrtmpwsnf pmekghlfrl psalnrtnsd salhtsvmnp apqdaylgps
      181 qagpppgrra gfldgdsdsk vflfqvppie enfddnkhsl kpwdtkklss ssarprscev
      241 pgihifpspd qpanvplmps alntggslpd lttlhfpspl ptpldpeeap ypplsggsst
      301 snlattmthl gisgtggvgl gydppglpsp lqsslsnpsl qsslsnpnlq aslrspslqa
      361 slsnpslqss hssssipssl snqslpssls sslsnpslpt sprsqplqss psnpslpsgl
      421 ggsfaatspr rrvplsplsl pvagdcrrqh pkqfsptmsp tlssitqgvp ldtsklpaeh
      481 lgqplaqpps dfglgsleqf gigesppgns ggfpeelgal syppseggyd ppglnrpnls
      541 ncsrhgpipn iiftgggtgg atxgvaglge veggslgglg gleeelriep ltldglsmls
      601 dpcalltdpa vedsfrsdrl q
//
LOCUS       XP_041323356            1523 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: DENN domain-containing protein 4B [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323356
VERSION     XP_041323356.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467422.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 13% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1523
                     /product="LOW QUALITY PROTEIN: DENN domain-containing
                     protein 4B"
                     /calculated_mol_wt=165140
     Region          197..282
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          316..500
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          566..639
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          813..853
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          815..844
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1523
                     /gene="DENND4B"
                     /coded_by="XM_041467422.1:904..5475"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121353522"
ORIGIN      
        1 marvpadavt amsdekppql vdyfvvagla egsraleeeq qprparpgep itdvaviirs
       61 qgeevpqgft cietstsghp vdlnagllnn pqmflcykrg rdkpplielg vhyegkdrpk
      121 pgyqildttp ysrsanlasg spghqrtflt frraaeppgh htlgvtdicl vmpskgestp
      181 htfcrvdknl ntsmwgpalf lcykiavakd ntlvyeagll srypeqdses fplpesvpvf
      241 clpmgaties wpvgtkyplp vfstfvltga sgdkvygaai qfheafprer lseaqalrlg
      301 llsvvdrrpv pgrslhtrks icvlshwpff dvfrkflmfi yrysisgphv lplethishf
      361 mhnvpfpspq rprilvqmsp ydslllcrpv ssplplsgas fltllqnlgp dnavallvav
      421 lteqkllihs lrpdvltsvg ealvamifpl rwqcpyiplc plaladvlca pvpfivgihs
      481 syfdlyeppr dvifvdldtn tifqseerkl lspralprrp ckvllaslhs lsqqldells
      541 apgeeeppel vlsdaeaaga rraqlelear aaflrfmaca lrgyrsflrp iapapapagr
      601 dagslfalqg flrsrerayq rfygqllrtq lftqfiedcs fasdrepcle ffdtcvdkvq
      661 vdlekpedtp lmelddprgg ehtvfitppe qpagpdgaep paryrydgfp tlrpellepp
      721 rdplvaqlcq arssapsspa prrtkqemkv aqrvaqkssa vpelwarcll ghcyglwfly
      781 lpthvraapa klralqlayd vlrkmeqhkv vlpdevcyri lmqlcgqyge pvlsvrvlle
      841 mkragivpnt vtygyynkav leskwpagtq ggrlrwaklr nvvlgaaqfr qplrqrqrrr
      901 aagdppgepa ppaprpplqr qttwagrslr dpapaprlvk sgslsfpgsa rgegaaregp
      961 geppvlpatp tpppgappax adgslsdiat ddsggdegpg ggpgggpggg pggatprrgl
     1021 aaklqqllsp gkrapprpse pprepgqrrg seqrdgdpss rrspaetllr prerpestas
     1081 evalgvtcac phgrppppsp vclppprpcc dpgsapsprr prpplvprsp pgagpvppsp
     1141 rgpvlsdrrr cleldetpel cngcsetppp grcervafay lsplvlrkel eslvenegae
     1201 llarpelvds hpiiywnlvw yfqrlglpsn lpllllgsqh aprdpqpwgp pappfsltfl
     1261 eallshvgln evhkaiglfl etlaapgapr tlhrsiyrel lfltlaalgr ehtdidpwgl
     1321 gtlgslwaht lgspgnippr lqpwgppapp fsltfleall shvglnevhk aiglfletla
     1381 apgaprtlhr siyrellflt laalgrehtd iggdtgtpgg prtplkysrr qkgppgppsn
     1441 tpgvrnppga avrggeagaa ildpgtargc pqaaildpgt gheasrapnp arcrlvghmg
     1501 gsarrtgdgs spqsharprt gat
//
LOCUS       XP_041323357             505 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 27 member 3, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323357
VERSION     XP_041323357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467423.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..505
                     /product="solute carrier family 27 member 3"
     Region          42..495
                     /region_name="Adenylate forming domain, Class I
                     superfamily"
                     /note="This family includes acyl- and aryl-CoA ligases, as
                     well as the adenylation domain of nonribosomal peptide
                     synthetases and firefly luciferases. The adenylate-forming
                     enzymes catalyze an ATP-dependent two-step reaction to
                     first activate a carboxylate...; cl17068"
                     /db_xref="CDD:473059"
     Site            order(107,110..115,117..118)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341228"
     Site            order(110,224..225,245..250,350,362,365,376,457)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341228"
     Site            order(110,149..150,206,208..209,212,224..225,245..250,350,
                     362,365,373..376,438)
                     /site_type="active"
                     /db_xref="CDD:341228"
     Site            order(149,208..209,212,224,373..375,429,438)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341228"
     CDS             1..505
                     /gene="SLC27A3"
                     /coded_by="XM_041467423.1:<1..1518"
                     /db_xref="GeneID:121353523"
ORIGIN      
        1 gggtgggpva pgvgrwhqgw vgdtgaglva pgtatrsphg avppelfgsv epllpslred
       61 gvavwvlgag pyppgavalq elldaaseel qpedvweped mndtclyift sgttglpkaa
      121 rvshlksimc lsfyelvgas srdvvylalp lyhmagsllg vvgclgigat cvlkekfsas
      181 qfwddcraeg vtvfqyigel crylvnqpqr pgerqhglrl avgsglrpdv wrsfqrrfgp
      241 vrivetygms egnvtlfnyt gtpgavgrcs fiyklfspfe vvrfdvaaga perdeagrci
      301 rartgetgll iapvtrrtpf lgyagspels eqkllrgvfa egdeffntgd lveqdeeqfv
      361 rfrdrigdtf rwkgenvatt evaeallahe slqeatvygv tvpghegrag maalvlrpgr
      421 sldgpglyrh leqllppfar prflrlqerl emtetfkqqk vrlardgcdp alvaeplfvl
      481 deaarafvpl dperwrrlrd grmri
//
LOCUS       XP_041323358            1079 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323358
VERSION     XP_041323358.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467424.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1079
                     /product="integrator complex subunit 3"
                     /calculated_mol_wt=121591
     Region          <66..>117
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          117..528
                     /region_name="Ints3_N"
                     /note="Integrator complex subunit 3 N-terminal; pfam10189"
                     /db_xref="CDD:431123"
     CDS             1..1079
                     /gene="INTS3"
                     /coded_by="XM_041467424.1:263..3502"
                     /db_xref="GeneID:121353524"
ORIGIN      
        1 melgkgkaaa agklllssll dckdeleevg tpgtpgipgt pgqqghrera gsgngsrgsg
       61 dapaprsagp kfpkspqspp gvpgasrdlg mllvpnspki pqipkipkip ickgtpqhee
      121 iclglftlvl tdpaqaqkcy rdlalvsrdg mnivlnkinh ilmekylklq dtcrtqlvwl
      181 lrelvksgvl gadgvcmtfm kqiaggdvta kniwlaenvl eilteqrnsl ksgiapcame
      241 llqplsswic pgvvvpgiqs qqeppeldfp vfinsmsitn fmdcfmigrd lvrllqnvar
      301 ipefeqlwkd ilhnpqvlss qftgvlqllq srtsrkflac rltpdmetkl lfmtsrvrfg
      361 qqkryqdwfq rqylstpdsq slrcdliryi cgvvhpsnev lssdilprwa iigwllttct
      421 snvaasnakl alfydwlffn pekdsimnie pailvmhhsm kphpaitatl ldfmcriipn
      481 fyppleahvr qgvfnslthi vekrvlahla plfdnpkldk elramlrekf pefcsspspp
      541 ievkieepvp memenhlekd dgcydnaeaa fsddeeelns kgkkrefrfh pikesiveep
      601 vditpfleql deslkdkvlq lqkgsdteaq cevmqeivdq vleedfdseq lsvlasclqe
      661 lfkahfrgev lpeeiteesl eesvgkplyl ifrnlcqmqe dnsgfsllld llselyqkqp
      721 kigyhllyyl raskaalgrm glyesfaqat qlgelhtclm mdmkacqedd vrllcfltps
      781 iytefpdetl rsgellnmiv avidsfqlqe lvchvmmgnl vmfrkdsvln iliqsldwet
      841 feqyctwqlf lahnipleti ipilqhlkyk ehpealscll lqlrrekpse emvkmvlsrp
      901 chpedqftts ilrhwglrhd dllgehikal liknnslprk rqslrssssk laqltleqil
      961 ehldnlrlnl tntkhnffsq tpilqalqhv qascdeahkm kfsdlfslae eyedssskpp
     1021 ksrrkatala sprsrksaaq ppnneeesgs ssaseeedtk pkpakrkrkg ssavgsdsd
//
LOCUS       XP_041323359             120 aa            linear   VRT 06-MAY-2021
DEFINITION  SNARE-associated protein Snapin [Pyrgilauda ruficollis].
ACCESSION   XP_041323359
VERSION     XP_041323359.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467425.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..120
                     /product="SNARE-associated protein Snapin"
                     /calculated_mol_wt=13545
     Region          11..98
                     /region_name="Snapin_Pallidin"
                     /note="Snapin/Pallidin; pfam14712"
                     /db_xref="CDD:464275"
     CDS             1..120
                     /gene="SNAPIN"
                     /coded_by="XM_041467425.1:1..363"
                     /db_xref="GeneID:121353525"
ORIGIN      
        1 maagsgpgar elfaegllqf lrpavrqldr hvhsvresqv elrehidsla telcrinedq
       61 kvaldldpyv kkllnarrrv vlvnnilqna qerlrrlnhs vaketvrrra mleaggyqgk
//
LOCUS       XP_041323360             504 aa            linear   VRT 06-MAY-2021
DEFINITION  mothers against decapentaplegic homolog 4-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323360
VERSION     XP_041323360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467426.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..504
                     /product="mothers against decapentaplegic homolog 4-like"
                     /calculated_mol_wt=54709
     Region          37..159
                     /region_name="MH1_SMAD_4"
                     /note="N-terminal Mad Homology 1 (MH1) domain in SMAD4;
                     cd10492"
                     /db_xref="CDD:199816"
     Site            order(61,65,68,100..101,104..108,111,129..130)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199816"
     Site            order(94,138,150,155)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:199816"
     Region          162..>276
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          276..497
                     /region_name="MH2_SMAD_4"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD4;
                     cd10498"
                     /db_xref="CDD:199823"
     Site            order(285,288,293..294,309..313,317,321..324,326..328,333,
                     337..338,340,443..445,449,452,475,482,484,486,489,
                     492..493,497)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:199823"
     CDS             1..504
                     /gene="LOC121353526"
                     /coded_by="XM_041467426.1:1..1515"
                     /db_xref="GeneID:121353526"
ORIGIN      
        1 matfpagvvt rrvtyrvtrr vtrhalqgrs amslgsdsgp givhsllchr qggdseafar
       61 raiqsllrkl kekrdeldal vaavtsggaq pgqcvtvqrt ldgrlqvagr kgfphviyar
      121 lwrwpdlhkn elkpvkfcqf afdlkcdsvc vnpyhyervg tpasglsiqs tvppprpvke
      181 efvhdcvqme tpqdpllhpe gppaqpppqn gypkpphhss plswssatiy tpslggsqpp
      241 ppqhpgsqsh pqppqhhpnh cwppvlqppv sthpgpefwc siayfeqdvq vgeifkvpss
      301 cptvvvdgyv dpsggarfcl gqlsnvqrca aserarlhig kgvqlerrge gdvwmrcrsd
      361 havfvqsfyl dreagrapgd avhkvypgah ikvfdlrqch rqmqqqaata qaaataqaaa
      421 vagsipgpgs vggiapaigl svaaglgvdd lrrlclvrls fvkgwgpdyp rasitctpcw
      481 ievhlhralq lldhvlhalp daha
//
LOCUS       XP_041323361             119 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A9-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323361
VERSION     XP_041323361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467427.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..119
                     /product="protein S100-A9-like"
                     /calculated_mol_wt=13467
     Region          3..92
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(3..20,26..28,37..38,40..42,75..78,80..81,83..86,
                     88..92)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(20,25,28,33..34,68,70,72,74,76,79)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..119
                     /gene="LOC121353528"
                     /coded_by="XM_041467427.1:1..360"
                     /db_xref="GeneID:121353528"
ORIGIN      
        1 mktdlelale cavnvyhrya mrhpmddyls keefssllkd taepflrntv ppkttidsyi
       61 qqlftkadgn hdgrlkftef lttlslvaid ahnrshkgpg ddhdhdhghg hghghshrr
//
LOCUS       XP_041323362             119 aa            linear   VRT 06-MAY-2021
DEFINITION  protein MRP-126-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323362
VERSION     XP_041323362.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467428.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..119
                     /product="protein MRP-126-like"
     Region          14..101
                     /region_name="calgranulins"
                     /note="Calgranulins: S-100 domain found in proteins
                     belonging to the Calgranulin subgroup of the S100 family
                     of EF-hand calcium-modulated proteins, including S100A8,
                     S100A9, and S100A12 . Note that the S-100 hierarchy, to
                     which this Calgranulin group belongs; cd05030"
                     /db_xref="CDD:240156"
     Site            order(14,20,22,28,52,54,83,91,93)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240156"
     Site            order(31,36,39,44,74,76,78,80,85)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:240156"
     CDS             1..119
                     /gene="LOC121353529"
                     /coded_by="XM_041467428.1:<1..360"
                     /db_xref="GeneID:121353529"
ORIGIN      
        1 pfllqaqqsq eplselekam dviidvfhqy srregdrdtl skkelkmmie kqlanylknv
       61 kskatidqim kdldvnkdaq isfgemmllv trvtcatheh lhevedhqhq hqhqhqhhh
//
LOCUS       XP_041323363             216 aa            linear   VRT 06-MAY-2021
DEFINITION  keratinocyte proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323363
VERSION     XP_041323363.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467429.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 24% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="keratinocyte proline-rich protein-like"
                     /calculated_mol_wt=23749
     CDS             1..216
                     /gene="LOC121353530"
                     /coded_by="XM_041467429.1:1..651"
                     /db_xref="GeneID:121353530"
ORIGIN      
        1 mlqqkggtdh dlcqhrsgcd hkgrtwpsst ghchdtpeic pnppeicpnp gslshdtegs
       61 sqschpselc pprpsccpap qsckprrrve vspvppvcpp pvkihrrple qhrpcppcpe
      121 pdscgkprrr veqcpeqdee ppvvlqplpl qhrcpciqrc prpvpccprp vpccprpvpc
      181 cprpaqrccp pvvplpphpg hqqqkqvtlv plcvkn
//
LOCUS       XP_041323365             253 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin-associated protein 5-4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323365
VERSION     XP_041323365.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467431.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..253
                     /product="keratin-associated protein 5-4-like"
                     /calculated_mol_wt=26616
     Region          <101..174
                     /region_name="NosR"
                     /note="Transcriptional regulator NosR of nitric oxide
                     reductase [Transcription]; COG3901"
                     /db_xref="CDD:443108"
     CDS             1..253
                     /gene="LOC121353531"
                     /coded_by="XM_041467431.1:1..762"
                     /db_xref="GeneID:121353531"
ORIGIN      
        1 mcstgccstg ccsvvksktv cctpcktvcc spcktvccsp cktvccspck tvccspcktv
       61 ccspcktvcc spcqqscccd pcqkpccdpc qcccdpcqkp ccdpcqsccd pcqkpccdpc
      121 qcccdpcqkp ccdpcqsccd pcqkpccdpc qtccdpcqkp ccdpcqsccd pcqkpccdpc
      181 qsccdpcqsv cctkvcqksv ccvprpccsp cgslsccscv vkkpvmvcct pvrkyctpci
      241 piqqccaslk ksc
//
LOCUS       XP_041323366             195 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323366
VERSION     XP_041323366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467432.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..195
                     /product="claw keratin-like"
                     /calculated_mol_wt=20045
     Region          8..>68
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..195
                     /gene="LOC121353532"
                     /coded_by="XM_041467432.1:1..588"
                     /db_xref="GeneID:121353532"
ORIGIN      
        1 mvhslspctd gspspcgvav pqpvadscne pcvrqcpdst vviypppvvv tfpgpilstf
       61 pqqsvvgseg vpavgaavga gvgaggyssc nygglygyrg ydcgspcgyr sygglygsrg
      121 lygfgdrygy gslygyrgif gsgdcygsgg lyggyrgfyg sgdcygypgf yssrygypfg
      181 srygqrfgfg gcysc
//
LOCUS       XP_041323367             105 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323367
VERSION     XP_041323367.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467433.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..105
                     /product="claw keratin-like"
                     /calculated_mol_wt=9706
     Region          4..66
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..105
                     /gene="LOC121353533"
                     /coded_by="XM_041467433.1:1..318"
                     /db_xref="GeneID:121353533"
ORIGIN      
        1 msccvpscgv atpapladts nepcvrqcpd stvviqppat vvtfpgpils sfpqqsavgs
       61 agapyvgggf ggssgrrggs ggsgglggfg gfggscgapr gcgpc
//
LOCUS       XP_041323368             105 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323368
VERSION     XP_041323368.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467434.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..105
                     /product="claw keratin-like"
                     /calculated_mol_wt=9706
     Region          4..66
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..105
                     /gene="LOC121353534"
                     /coded_by="XM_041467434.1:1..318"
                     /db_xref="GeneID:121353534"
ORIGIN      
        1 msccvpscgv atpapladts nepcvrqcpd stvviqppat vvtfpgpils sfpqqsavgs
       61 agapyvgggf ggssgrrggs ggsgglggfg gfggscgapr gcgpc
//
LOCUS       XP_041323369             130 aa            linear   VRT 06-MAY-2021
DEFINITION  feather keratin 4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323369
VERSION     XP_041323369.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467435.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..130
                     /product="feather keratin 4-like"
                     /calculated_mol_wt=13605
     Region          7..70
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..130
                     /gene="LOC121353535"
                     /coded_by="XM_041467435.1:51..443"
                     /db_xref="GeneID:121353535"
ORIGIN      
        1 mastqlscat pcepkcpqpl asstnepcvv tcgdsrviiy pppvvvtfpg pilttypqqt
       61 vvgasepsev algeppapaa lpaevtagdk vaapvlarpe prcapkysys yssqwthpcn
      121 syrsgkrwtc
//
LOCUS       XP_041323370             121 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323370
VERSION     XP_041323370.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467436.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..121
                     /product="scale keratin-like"
                     /calculated_mol_wt=11924
     Region          7..>67
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..121
                     /gene="LOC121353537"
                     /coded_by="XM_041467436.1:1..366"
                     /db_xref="GeneID:121353537"
ORIGIN      
        1 mscssescgv scpqpiaesa nepcvqqcpd sralilpppv vvtipgpvls tfpqesiqav
       61 vgssgapafg gslglgglyg agatqasggl ctfgrayaap tcspcalpry skklwntcgs
      121 c
//
LOCUS       XP_041323371             173 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323371
VERSION     XP_041323371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467437.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..173
                     /product="scale keratin-like"
                     /calculated_mol_wt=16553
     Region          24..87
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..173
                     /gene="LOC121353538"
                     /coded_by="XM_041467437.1:1..522"
                     /db_xref="GeneID:121353538"
ORIGIN      
        1 mscydlcsig gsgliggagl iggsacgalr pqplagsgne pcvrqcpdst tviqppavvv
       61 tfpgpilssf pqdsvvgsag apvlaasgas lgyggfgsgg yggfglggyg gfglggyggl
      121 wgyggsslgy gglgycggss lgyrglfgsg rsfgscssys rygryrrgsc gpc
//
LOCUS       XP_041323372             175 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323372
VERSION     XP_041323372.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467438.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..175
                     /product="scale keratin-like"
                     /calculated_mol_wt=16628
     Region          24..87
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..175
                     /gene="LOC121353539"
                     /coded_by="XM_041467438.1:1..528"
                     /db_xref="GeneID:121353539"
ORIGIN      
        1 mscydlcsig gsgliggagl iggsacgalr pqplagsgne pcvrqcpdst tviqppavvv
       61 tfpgpilssf pqdsvvgsag apvlaasgas lgyggfgsgg yggfglggyg gfglggyggf
      121 glggyggssl gygglgycgg sslgyrglfg sgrsfgscss ysrygryrrg scgpc
//
LOCUS       XP_041323374             106 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323374
VERSION     XP_041323374.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467440.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..106
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..106
                     /product="scale keratin-like"
                     /calculated_mol_wt=10764
     Region          8..87
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..106
                     /gene="LOC121353540"
                     /coded_by="XM_041467440.1:1..321"
                     /db_xref="GeneID:121353540"
ORIGIN      
        1 msfssqlssr csapcavscp qpcadtwnqp cvtscgdsra vvypppvvit fpgpilsscp
       61 qesivgsafp vgmersaglq gslvyggfls ssrnawsqrs ggcgpc
//
LOCUS       XP_041323375             218 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin-associated protein 10-8-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323375
VERSION     XP_041323375.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467441.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="keratin-associated protein 10-8-like"
                     /calculated_mol_wt=22186
     Region          6..79
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..218
                     /gene="LOC121353541"
                     /coded_by="XM_041467441.1:1..657"
                     /db_xref="GeneID:121353541"
ORIGIN      
        1 mscektmcae pcpdpraaac nepcvvacpd srviifpppv vvtfpgpilt typqetvvgs
       61 tesaelagal eagvpigtgq kgleclescc vpqfvakcdp pcvtqcappc vtpcaapcat
      121 kcappcpppc appcappcpp pcatkcatkc appcpapcaa pcaspcatkc vtkcvptctt
      181 pcatpcatpc atkcvpersy tfstrwkhpc qrglckki
//
LOCUS       XP_041323376             185 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-keratin-related protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323376
VERSION     XP_041323376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467442.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="beta-keratin-related protein-like"
                     /calculated_mol_wt=17065
     Region          3..>65
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..185
                     /gene="LOC121353542"
                     /coded_by="XM_041467442.1:1..558"
                     /db_xref="GeneID:121353542"
ORIGIN      
        1 mmssgcsspc evscpqpyad awsqpcvtsc gdsravvypp pvvitfpgpi lsscpqesiv
       61 gtsfpsgamg ssgsggaigg sygggsgsmg giggsigggs mggsygggsm ggigrsyggg
      121 sfggsyggsr sfggrrsfgs sgggfggscg ggssfgggsc gvgsygggss ssrrfgggnc
      181 gsfyf
//
LOCUS       XP_041323377             190 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type I cytoskeletal 9-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323377
VERSION     XP_041323377.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467443.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="keratin, type I cytoskeletal 9-like"
                     /calculated_mol_wt=17064
     Region          3..>65
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..190
                     /gene="LOC121353543"
                     /coded_by="XM_041467443.1:1..573"
                     /db_xref="GeneID:121353543"
ORIGIN      
        1 mmssgcsspc evscpqpyad awsqpcvtsc gdsravvypp pvvitfpgpi lsscpqesiv
       61 gtsfpsgamg ssgsggaigg sygggsgsmg giggsigggs mggsygggsm ggiggsyggs
      121 slggsygggs lggsygggsl ggsygggggf ggscgggssf gggscgvgsy gggssssrrf
      181 gggncgsfyf
//
LOCUS       XP_041323378             166 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323378
VERSION     XP_041323378.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467444.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..166
                     /product="claw keratin-like"
                     /calculated_mol_wt=15772
     Region          5..>68
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..166
                     /gene="LOC121353544"
                     /coded_by="XM_041467444.1:1..501"
                     /db_xref="GeneID:121353544"
ORIGIN      
        1 mscissrclp gcevacpepc aysrglgpcv ascgdstalv yappvwitfp gpilsscpqe
       61 sivassmpqp sggssygsgm ggysgglpri ggsygsggsy gsggsygsgg syssggsygs
      121 ggsygcgsss ggvsgrlgss gggsssggcy lrkfytsssr gsrlgn
//
LOCUS       XP_041323379             186 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323379
VERSION     XP_041323379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467445.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..186
                     /product="scale keratin-like"
                     /calculated_mol_wt=17843
     Region          9..74
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..186
                     /gene="LOC121353545"
                     /coded_by="XM_041467445.1:1..561"
                     /db_xref="GeneID:121353545"
ORIGIN      
        1 mmsnvgsecl pgcevactqp caysrslepc vascgdskav vfpppvvltf pgptistcsq
       61 esvvgasqpt vlgapipsis depygvgssf gagsmmgagp sfgsggsfgy ggssgargsf
      121 gyggsfgygm qnsrgscgyg galgakgsfg sggafgygss lgmggscsrr srssrggscl
      181 gswgss
//
LOCUS       XP_041323380             300 aa            linear   VRT 06-MAY-2021
DEFINITION  keratinocyte proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323380
VERSION     XP_041323380.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467446.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="keratinocyte proline-rich protein-like"
                     /calculated_mol_wt=32259
     CDS             1..300
                     /gene="LOC121353546"
                     /coded_by="XM_041467446.1:1..903"
                     /db_xref="GeneID:121353546"
ORIGIN      
        1 mhypgercps lllpgpkfip ellppcpahp epfantchpl sitkgpaprw qscpqgatav
       61 sllpcqplvq kclllypepc ettrllprpr gsgvpqtlpa pqsprgdkkr varslppcap
      121 rcpepgrlrf ppcgircssa scrgecrshk vaaclprcpe lsggyslplr gvtecppqqs
      181 vtrsflqeql agvaphrcsk gyptqefvtc csteqrlssa tttcgvtkat kecpplrmva
      241 kgslplegtk grscsaqhls ksrcghhhpr gsprpsrlap agakrsshsk ksrsaskwlw
//
LOCUS       XP_041323381             524 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin-associated protein 10-4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323381
VERSION     XP_041323381.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467447.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..524
                     /product="keratin-associated protein 10-4-like"
                     /calculated_mol_wt=56460
     Region          <7..174
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..524
                     /gene="LOC121353548"
                     /coded_by="XM_041467447.1:1..1575"
                     /db_xref="GeneID:121353548"
ORIGIN      
        1 mschlhqhlp plyqdpmals pgvpfpaqrw hsttcipqam pgqvplqrat sssvcqqqsv
       61 tqavpprqlh gppcvpqhll hqqivprrvt tcvppqqrvt qcvphqvgvt qcvpqqlrvp
      121 hycppvpqqq kvvprcvttc vpqqrvtgga gvtgvtqcvp qqlqvpppec vpqqqkivpr
      181 cvttcvprpp fvtkgvpqqq satrcvpqqc vtsvcpqqgv prcvttcvpq qraargvsyq
      241 wvtapvpqqw qsvtasvpqq whsrcvtkcv pqqcdtggas icvpqqqqsg mvcvpqqsat
      301 kgvpqqcvtk gvpqqsatkc vpqqcgticv sqqsatqcvp qqygticvpq qcvtksvtqq
      361 satkcvpqqs vtkcvpqqgm tkcvpqqsat kgvtqkyrtv cvpqqsatkc vpqqsvkcvp
      421 qqcgticvpq qsatkcvpqq ygtigvpqqc vtkcvsqqsa tmcvpqqcvt ksvpqqcgti
      481 gvpqqcvtkc vpqqsatkcv pqqsggvkis shskkycsap kwpw
//
LOCUS       XP_041323382             294 aa            linear   VRT 06-MAY-2021
DEFINITION  keratinocyte proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323382
VERSION     XP_041323382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467448.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="keratinocyte proline-rich protein-like"
                     /calculated_mol_wt=32233
     Region          <14..291
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..294
                     /gene="LOC121353549"
                     /coded_by="XM_041467448.1:1..885"
                     /db_xref="GeneID:121353549"
ORIGIN      
        1 mslnqmqikq elqlppglgk ttakqspehp qipepgkgea agaavpqgpp qeqqtqfppa
       61 fpnpepaprl eekscpeptl ekqeakeipv pvpvpcseaa vcaqekqqvq eipvsipekq
      121 eckeipvsip dphpdpvpcs qekqqcqeip vstqeipvsi pekqeckeip vsipekqeck
      181 eipvsipdph pdpvpcsqek qqcqeipvst pdpvpcaqek qeckeipvsi pekqeckdap
      241 vpipvsipep tpcaqekqec qeipipvptp eqrslpekfp pleqqleqpg pwqk
//
LOCUS       XP_041323383             844 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin-associated protein 16-1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323383
VERSION     XP_041323383.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467449.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..844
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..844
                     /product="keratin-associated protein 16-1-like"
                     /calculated_mol_wt=89896
     Region          123..282
                     /region_name="Keratin_B2"
                     /note="Keratin, high sulfur B2 protein; pfam01500"
                     /db_xref="CDD:366678"
     Region          245..402
                     /region_name="Keratin_B2"
                     /note="Keratin, high sulfur B2 protein; pfam01500"
                     /db_xref="CDD:366678"
     Region          382..536
                     /region_name="Keratin_B2"
                     /note="Keratin, high sulfur B2 protein; pfam01500"
                     /db_xref="CDD:366678"
     Region          516..680
                     /region_name="Keratin_B2"
                     /note="Keratin, high sulfur B2 protein; pfam01500"
                     /db_xref="CDD:366678"
     Region          <681..>843
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..844
                     /gene="LOC121353550"
                     /coded_by="XM_041467449.1:1..2535"
                     /db_xref="GeneID:121353550"
ORIGIN      
        1 mrratgcpls qicipppavl vrsfpvrssp dpcgtaggfq cfpprrspcc fpgtttyvsl
       61 gslaaaqaag cakpcglvat tcvppcyqgm agctttcrnp ccccrvtesc trsqdccqev
      121 akcstatcqd pccqevtkct ttcqdpccqe vtkcvttcqd pccqevtkcv ttcqdpccqe
      181 vskctptcqd pcckevtkct ttcvdpccqe vtkcvttcqd pcykevtkcv ttcqdpccke
      241 vttctttcqd pcckevtkcr trcvdpccqe vtkcvttcqd pcsqevtkcv ttcqdpccqe
      301 vtkcvttcqd pcckqvtact ttcvdpccqe atkcvttcqd pccqevskct ptcqdpccke
      361 vttcatcvdp ccqevskcvt rcvdpccqev trcvttcvdp ccqevtkcvt tcqdpcsqev
      421 tkcvttcqdp ccqevtkcvt tcqdpcckqv tactttcvdp ccqeatkcvt tcqdpccqev
      481 skctptcqdp cckevttcat cvdpccqevs kcvtrcvdpc cqevtrcvtt cvdpccqevp
      541 kcrtscvdpc cqevtkrvtt cqdpccqevs kcrtscvdpc cqevtkrvtt cqdpccqevs
      601 kcrtrcvdpc cqeitkcatr cvdpccqevt kcttrcvdpc cqgvtscatr cvdpccqgva
      661 rcvttcqdpc cvtrcatrec ppaktpaare cppaktpaar ecppaktpaa recppaktpa
      721 arecppaktp aarecppakt paarecppak tpaarecppa ktpaarecpp aktpaarecp
      781 paktpaarec ppaktpaare cppaktpaar ecppaktpaa recppaktpa arecppaktp
      841 aare
//
LOCUS       XP_041323385             217 aa            linear   VRT 06-MAY-2021
DEFINITION  circadian-associated transcriptional repressor [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323385
VERSION     XP_041323385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="circadian-associated transcriptional repressor"
                     /calculated_mol_wt=23046
     Region          <12..>76
                     /region_name="PLN02744"
                     /note="dihydrolipoyllysine-residue acetyltransferase
                     component of pyruvate dehydrogenase complex"
                     /db_xref="CDD:215397"
     Region          54..>157
                     /region_name="Ciart"
                     /note="Circadian-associated transcriptional repressor;
                     pfam15673"
                     /db_xref="CDD:464794"
     CDS             1..217
                     /gene="CIART"
                     /coded_by="XM_041467451.1:369..1022"
                     /db_xref="GeneID:121353551"
ORIGIN      
        1 mepparacsc gspasdseae agssprsppk aersrkrpgg lerappespp aprggkrprk
       61 geggdappsd gdrlfaqkcr elrgfirpla elleglrrgr ydrglssfqq svamdrlqri
      121 igvlqkpemg arylgtllqv eamlrlwfph vapkptlepa ppaapprrrp pagppgaprc
      181 rrlpgdlpla spagtlqqrg spqcqagppe sppapdv
//
LOCUS       XP_041323386             217 aa            linear   VRT 06-MAY-2021
DEFINITION  circadian-associated transcriptional repressor [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323386
VERSION     XP_041323386.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467452.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="circadian-associated transcriptional repressor"
                     /calculated_mol_wt=23046
     Region          <12..>76
                     /region_name="PLN02744"
                     /note="dihydrolipoyllysine-residue acetyltransferase
                     component of pyruvate dehydrogenase complex"
                     /db_xref="CDD:215397"
     Region          54..>157
                     /region_name="Ciart"
                     /note="Circadian-associated transcriptional repressor;
                     pfam15673"
                     /db_xref="CDD:464794"
     CDS             1..217
                     /gene="CIART"
                     /coded_by="XM_041467452.1:356..1009"
                     /db_xref="GeneID:121353551"
ORIGIN      
        1 mepparacsc gspasdseae agssprsppk aersrkrpgg lerappespp aprggkrprk
       61 geggdappsd gdrlfaqkcr elrgfirpla elleglrrgr ydrglssfqq svamdrlqri
      121 igvlqkpemg arylgtllqv eamlrlwfph vapkptlepa ppaapprrrp pagppgaprc
      181 rrlpgdlpla spagtlqqrg spqcqagppe sppapdv
//
LOCUS       XP_041323387             157 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323387
VERSION     XP_041323387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467453.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..157
                     /product="scale keratin-like"
                     /calculated_mol_wt=15643
     Region          3..74
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..157
                     /gene="LOC121353552"
                     /coded_by="XM_041467453.1:1..474"
                     /db_xref="GeneID:121353552"
ORIGIN      
        1 mscydlcstg sacgvlrpqp ladsgnepcv rqcpdsttvi qppavvvtfp gpilssfpqd
       61 svvgsagapv laasgaslgy ggygslgygg ygslgyggly gyggygslgy gglwgygglg
      121 scggyrglyg sgrafgsgyc spyswygryg rgfwgsc
//
LOCUS       XP_041323388             142 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323388
VERSION     XP_041323388.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467454.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..142
                     /product="claw keratin-like"
                     /calculated_mol_wt=13739
     Region          3..69
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..142
                     /gene="LOC121353553"
                     /coded_by="XM_041467454.1:1..429"
                     /db_xref="GeneID:121353553"
ORIGIN      
        1 mscnslcvps cgvatpapla dtcnepcvrq cpdstvviqp pasvvtfpgp ilssfpqqsa
       61 vgsagapyvg agsggafgsr ggyggygslg gyggyggwgy ggrglyggwg yggrggyggw
      121 gcggyggwss ghrylngncg pc
//
LOCUS       XP_041323389             156 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323389
VERSION     XP_041323389.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467455.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="claw keratin-like isoform X1"
                     /calculated_mol_wt=15023
     Region          3..69
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..156
                     /gene="LOC121353554"
                     /coded_by="XM_041467455.1:1..471"
                     /db_xref="GeneID:121353554"
ORIGIN      
        1 mscnslcvps cgvatpapla dtcnepcvrq cpdstvviqp pasvvtfpgp ilssfpqqsa
       61 vgsagapyvg agsggafgsr ggyggygslg gyggyggwgy ggrglyggwg yggrggyggw
      121 gcggyggfgg yggygscgyg gwssghryln gncgpc
//
LOCUS       XP_041323390             140 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323390
VERSION     XP_041323390.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467456.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..140
                     /product="claw keratin-like isoform X2"
                     /calculated_mol_wt=13378
     Region          3..69
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..140
                     /gene="LOC121353554"
                     /coded_by="XM_041467456.1:1..423"
                     /db_xref="GeneID:121353554"
ORIGIN      
        1 mscnslcvps cgvatpapla dtcnepcvrq cpdstvviqp pasvvtfpgp ilssfpqqsa
       61 vgsagapyvg agsggafgsr ggyggygslg gyggyggrgg yggwgcggyg gfggyggygs
      121 cgyggwssgh rylngncgpc
//
LOCUS       XP_041323391            1198 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: coatomer subunit alpha [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323391
VERSION     XP_041323391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467457.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1198
                     /product="LOW QUALITY PROTEIN: coatomer subunit alpha"
                     /calculated_mol_wt=134283
     Region          11..279
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(11,29,33,39..40,52..53,70,75,81..82,95,112,117,
                     123..124,164..165,183,187,193..194,208..209,226,231,
                     237..238,250..251,268,272,278..279)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          18..52
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          58..94
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          99..163
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          170..207
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..249
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          257..294
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          285..748
                     /region_name="Coatomer_WDAD_alpha"
                     /note="Coatomer WD Associated Region from Coatomer Subunit
                     Alpha; cd22948"
                     /db_xref="CDD:438573"
     Region          285..298
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:438573"
     Region          324..375
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:438573"
     Region          378..398
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:438573"
     Region          513..539
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:438573"
     Region          541..566
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:438573"
     Site            order(712..714,734..735,737..740)
                     /site_type="active"
                     /note="coatomer subunit alpha binding site [active]"
                     /db_xref="CDD:438573"
     Region          790..1192
                     /region_name="COPI_C"
                     /note="Coatomer (COPI) alpha subunit C-terminus;
                     pfam06957"
                     /db_xref="CDD:462050"
     CDS             1..1198
                     /gene="COPA"
                     /coded_by="XM_041467457.1:1..3597"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121353555"
ORIGIN      
        1 mcslidkfde hdgpvrgidf hkqqplfvsg gddykikvwn yklrrclftl lghldyirtt
       61 ffhheypwil sasddqtirv wnwqsrtcvc vltghnhyvm caqfhpsedl vvsasldqtv
      121 rvwdisglrk knlspgaves dvrgitgvdl fgttdavvkh vleghdrgvn waafhpsmpl
      181 ivsgaddrqv kiwrmneska wevdtcrghy nnvscavfhp rqelilsnse dksirvwdms
      241 krtgvqtfrr dhdrfwvlaa hpnlnlfaag hdggmlvfkl ererpalavh gnslfyvkdr
      301 flrqldfgss rdvavmqlrs gskfpvfsms ynpaensvll ctrasnlens tydlytipkd
      361 adsqnpdape gkrssgltav wvarnrfavl drmhsvrsre kkmgkigimg vqggxsqrek
      421 gwgnwdwdng dqiqrglipk ikglgkpgmg leelekgmed pegafppfpp fphpavpaip
      481 avpailicnr kleslcqihe nirvksgawd esgvfiytts nhikyavtsg dhgiirtldl
      541 piyvtrvkgn nvycldrecr prvltidpte frfklalinr kydevlhmvr naklvgqsii
      601 aylqrkgype valhfvkdek trfslalecg nieialeaak alddkgcwek lgevallqgn
      661 hqvvemcyqr tknfdrlsfl ylitgnlekl rkmmkiaeir kdmsghyqna lylgdvaerv
      721 rilrncgqks lafltaathg ldeeaeslre sfdpeketip avdpearllq ppapvlpldt
      781 nwplltvskg ffegsiagkg kggalaadid mdavgtegwg edaelqlded gfvdagegfg
      841 eegtgkgqee gggweveedl dlppeldvpa gpagtaedgf fvpptkgtsp aqvwcnnsql
      901 pvdhilagsf etamrllhdq vgvtnfgpyk qlflqtfsrg rttfqalpsl pamygyphrn
      961 wkeaglktal pavglklndl iqrlqlcyql ttagkfeeav ekfrlillsv pllvvdnkqe
     1021 iaeaqqlvai creyivglsm eierkklpke tleqqkrice maayfthsnl qpvhmilvlr
     1081 talnlffklk nfksaatfar rllelgpkpe vaqqtrkila aceknpidsh qlnydqhnpf
     1141 dicaasyrpi yrgkavekcp lsgacyspef rgqicrvttv teigkdvlgl risplqfr
//
LOCUS       XP_041323392            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  atrial natriuretic peptide receptor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323392
VERSION     XP_041323392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="atrial natriuretic peptide receptor 1 isoform
                     X1"
                     /calculated_mol_wt=117310
     Region          31..437
                     /region_name="PBP1_NPR_A"
                     /note="Ligand-binding domain of type A natriuretic peptide
                     receptor; cd06385"
                     /db_xref="CDD:380608"
     Site            order(80,112..113)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:380608"
     Site            order(94,98,114..115,118,122,126..127,193..194,197,200)
                     /site_type="other"
                     /note="dimer interface (closed form) [polypeptide
                     binding]"
                     /db_xref="CDD:380608"
     Site            order(114..115,118,122,140..141,186,193..194,197,200..201,
                     213)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:380608"
     Site            order(226..227,247,254)
                     /site_type="other"
                     /note="dimer interface (open form) [polypeptide binding]"
                     /db_xref="CDD:380608"
     Region          528..802
                     /region_name="PK_GC-A_B"
                     /note="Pseudokinase domain of the membrane Guanylate
                     Cyclase receptors, GC-A and GC-B; cd14042"
                     /db_xref="CDD:270944"
     Region          <808..856
                     /region_name="HNOBA"
                     /note="Heme NO binding associated; pfam07701"
                     /db_xref="CDD:462234"
     Region          835..1027
                     /region_name="CYCc"
                     /note="Adenylyl- / guanylyl cyclase, catalytic domain;
                     smart00044"
                     /db_xref="CDD:214485"
     Site            order(874,876..881,916,918..920,923,988..990,994..995,
                     998..999,1036)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(876,920)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(881,893,896..897,900,904,916..917,976,979,989..992,
                     995,1036)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1045
                     /gene="NPR1"
                     /coded_by="XM_041467458.1:143..3280"
                     /db_xref="GeneID:121353556"
ORIGIN      
        1 mlavlaplla pllapllall paagtapapl tlavvlprrn ltypwawprv gpavrlaaaa
       61 vnsrrdllpg ftlgwvfgds edrhgvcsem aaplvavdlr lahhpaaflg pgcvysaapv
      121 arftshwqlp lvtagaeahg fddkseefgl ttragpshrk lgelgvqlhr rfnwtrrall
      181 vywdervddr pyyfaaegly vqlptlrnlt vmdvvfrdgg nfsfiiqeik akgrivyvcc
      241 apdtlrelll qaeregltgg dfaffyidpl gaslqgqrfp eprrpwhrgd ahdararraf
      301 qavtiityke penpeyrpfl qrlkeearhh fnfsikdglm nfiaaafhdg vllyaqalne
      361 tlerggsvsd asaitrqmwn rtfygvtgfl kideqgdres dyslwdmdpe qgnfqivany
      421 ngttkkiqml pgrdihwpgn avpsdvppcg fegtdpqcrk aslstlevls lvvsliltai
      481 tvtsfficrk lqlekelaae lwrvrwedvq msslekhlrs agskltlslr gsnygslmta
      541 egqfqvyakt ayykgnlvav khlnrkriel trkvlfelkh mrdvqnehlt rfigactdpp
      601 nicilteycp rgslqdilen esitldwmfr yslthdivkg mqflhngviv shgnlkssnc
      661 vvdsrfvlki tdyglesfrv apdgddthal fakklwtape llrmeeppar gtqkgdvysf
      721 giilqeialr sgvfyvegmd lspkeiierv ksgerpsfrp sanvgchlee lgqlmqhcwa
      781 edvlerpdfn qikvqlrkfn resstnildn llsrmeqyan nleelveert qayleekrka
      841 eallyqilph svaeqlkrge tvqaeafdsv tiyfsdivgf talsaqstpm qvvtllndly
      901 tcfdaiidnf dvykvetigd aymvvsglpv rngklharev armalallda vrsfrirhrp
      961 qqqlelrigi htgpvcagvv glkmpryclf gdtvntasrm esngealkih isgvtkavle
     1021 efggfelelr gdvemkvrls ppklp
//
LOCUS       XP_041323394            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  atrial natriuretic peptide receptor 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323394
VERSION     XP_041323394.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467460.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="atrial natriuretic peptide receptor 1 isoform
                     X2"
                     /calculated_mol_wt=117310
     Region          31..437
                     /region_name="PBP1_NPR_A"
                     /note="Ligand-binding domain of type A natriuretic peptide
                     receptor; cd06385"
                     /db_xref="CDD:380608"
     Site            order(80,112..113)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:380608"
     Site            order(94,98,114..115,118,122,126..127,193..194,197,200)
                     /site_type="other"
                     /note="dimer interface (closed form) [polypeptide
                     binding]"
                     /db_xref="CDD:380608"
     Site            order(114..115,118,122,140..141,186,193..194,197,200..201,
                     213)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:380608"
     Site            order(226..227,247,254)
                     /site_type="other"
                     /note="dimer interface (open form) [polypeptide binding]"
                     /db_xref="CDD:380608"
     Region          528..802
                     /region_name="PK_GC-A_B"
                     /note="Pseudokinase domain of the membrane Guanylate
                     Cyclase receptors, GC-A and GC-B; cd14042"
                     /db_xref="CDD:270944"
     Region          <808..856
                     /region_name="HNOBA"
                     /note="Heme NO binding associated; pfam07701"
                     /db_xref="CDD:462234"
     Region          835..1027
                     /region_name="CYCc"
                     /note="Adenylyl- / guanylyl cyclase, catalytic domain;
                     smart00044"
                     /db_xref="CDD:214485"
     Site            order(874,876..881,916,918..920,923,988..990,994..995,
                     998..999,1036)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(876,920)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(881,893,896..897,900,904,916..917,976,979,989..992,
                     995,1036)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1045
                     /gene="NPR1"
                     /coded_by="XM_041467460.1:132..3269"
                     /db_xref="GeneID:121353556"
ORIGIN      
        1 mlavlaplla pllapllall paagtapapl tlavvlprrn ltypwawprv gpavrlaaaa
       61 vnsrrdllpg ftlgwvfgds edrhgvcsem aaplvavdlr lahhpaaflg pgcvysaapv
      121 arftshwqlp lvtagaeahg fddkseefgl ttragpshrk lgelgvqlhr rfnwtrrall
      181 vywdervddr pyyfaaegly vqlptlrnlt vmdvvfrdgg nfsfiiqeik akgrivyvcc
      241 apdtlrelll qaeregltgg dfaffyidpl gaslqgqrfp eprrpwhrgd ahdararraf
      301 qavtiityke penpeyrpfl qrlkeearhh fnfsikdglm nfiaaafhdg vllyaqalne
      361 tlerggsvsd asaitrqmwn rtfygvtgfl kideqgdres dyslwdmdpe qgnfqivany
      421 ngttkkiqml pgrdihwpgn avpsdvppcg fegtdpqcrk aslstlevls lvvsliltai
      481 tvtsfficrk lqlekelaae lwrvrwedvq msslekhlrs agskltlslr gsnygslmta
      541 egqfqvyakt ayykgnlvav khlnrkriel trkvlfelkh mrdvqnehlt rfigactdpp
      601 nicilteycp rgslqdilen esitldwmfr yslthdivkg mqflhngviv shgnlkssnc
      661 vvdsrfvlki tdyglesfrv apdgddthal fakklwtape llrmeeppar gtqkgdvysf
      721 giilqeialr sgvfyvegmd lspkeiierv ksgerpsfrp sanvgchlee lgqlmqhcwa
      781 edvlerpdfn qikvqlrkfn resstnildn llsrmeqyan nleelveert qayleekrka
      841 eallyqilph svaeqlkrge tvqaeafdsv tiyfsdivgf talsaqstpm qvvtllndly
      901 tcfdaiidnf dvykvetigd aymvvsglpv rngklharev armalallda vrsfrirhrp
      961 qqqlelrigi htgpvcagvv glkmpryclf gdtvntasrm esngealkih isgvtkavle
     1021 efggfelelr gdvemkvrls ppklp
//
LOCUS       XP_041323395            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  atrial natriuretic peptide receptor 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323395
VERSION     XP_041323395.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467461.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="atrial natriuretic peptide receptor 1 isoform
                     X3"
                     /calculated_mol_wt=117310
     Region          31..437
                     /region_name="PBP1_NPR_A"
                     /note="Ligand-binding domain of type A natriuretic peptide
                     receptor; cd06385"
                     /db_xref="CDD:380608"
     Site            order(80,112..113)
                     /site_type="other"
                     /note="Cl binding site [ion binding]"
                     /db_xref="CDD:380608"
     Site            order(94,98,114..115,118,122,126..127,193..194,197,200)
                     /site_type="other"
                     /note="dimer interface (closed form) [polypeptide
                     binding]"
                     /db_xref="CDD:380608"
     Site            order(114..115,118,122,140..141,186,193..194,197,200..201,
                     213)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:380608"
     Site            order(226..227,247,254)
                     /site_type="other"
                     /note="dimer interface (open form) [polypeptide binding]"
                     /db_xref="CDD:380608"
     Region          528..802
                     /region_name="PK_GC-A_B"
                     /note="Pseudokinase domain of the membrane Guanylate
                     Cyclase receptors, GC-A and GC-B; cd14042"
                     /db_xref="CDD:270944"
     Region          <808..856
                     /region_name="HNOBA"
                     /note="Heme NO binding associated; pfam07701"
                     /db_xref="CDD:462234"
     Region          835..1027
                     /region_name="CYCc"
                     /note="Adenylyl- / guanylyl cyclase, catalytic domain;
                     smart00044"
                     /db_xref="CDD:214485"
     Site            order(874,876..881,916,918..920,923,988..990,994..995,
                     998..999,1036)
                     /site_type="active"
                     /note="nucleotidyl binding site [active]"
                     /db_xref="CDD:143636"
     Site            order(876,920)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     Site            order(881,893,896..897,900,904,916..917,976,979,989..992,
                     995,1036)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143636"
     CDS             1..1045
                     /gene="NPR1"
                     /coded_by="XM_041467461.1:144..3281"
                     /db_xref="GeneID:121353556"
ORIGIN      
        1 mlavlaplla pllapllall paagtapapl tlavvlprrn ltypwawprv gpavrlaaaa
       61 vnsrrdllpg ftlgwvfgds edrhgvcsem aaplvavdlr lahhpaaflg pgcvysaapv
      121 arftshwqlp lvtagaeahg fddkseefgl ttragpshrk lgelgvqlhr rfnwtrrall
      181 vywdervddr pyyfaaegly vqlptlrnlt vmdvvfrdgg nfsfiiqeik akgrivyvcc
      241 apdtlrelll qaeregltgg dfaffyidpl gaslqgqrfp eprrpwhrgd ahdararraf
      301 qavtiityke penpeyrpfl qrlkeearhh fnfsikdglm nfiaaafhdg vllyaqalne
      361 tlerggsvsd asaitrqmwn rtfygvtgfl kideqgdres dyslwdmdpe qgnfqivany
      421 ngttkkiqml pgrdihwpgn avpsdvppcg fegtdpqcrk aslstlevls lvvsliltai
      481 tvtsfficrk lqlekelaae lwrvrwedvq msslekhlrs agskltlslr gsnygslmta
      541 egqfqvyakt ayykgnlvav khlnrkriel trkvlfelkh mrdvqnehlt rfigactdpp
      601 nicilteycp rgslqdilen esitldwmfr yslthdivkg mqflhngviv shgnlkssnc
      661 vvdsrfvlki tdyglesfrv apdgddthal fakklwtape llrmeeppar gtqkgdvysf
      721 giilqeialr sgvfyvegmd lspkeiierv ksgerpsfrp sanvgchlee lgqlmqhcwa
      781 edvlerpdfn qikvqlrkfn resstnildn llsrmeqyan nleelveert qayleekrka
      841 eallyqilph svaeqlkrge tvqaeafdsv tiyfsdivgf talsaqstpm qvvtllndly
      901 tcfdaiidnf dvykvetigd aymvvsglpv rngklharev armalallda vrsfrirhrp
      961 qqqlelrigi htgpvcagvv glkmpryclf gdtvntasrm esngealkih isgvtkavle
     1021 efggfelelr gdvemkvrls ppklp
//
LOCUS       XP_041323396             121 aa            linear   VRT 06-MAY-2021
DEFINITION  claw keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323396
VERSION     XP_041323396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467462.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..121
                     /product="claw keratin-like"
                     /calculated_mol_wt=11345
     Region          3..69
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..121
                     /gene="LOC121353557"
                     /coded_by="XM_041467462.1:1..366"
                     /db_xref="GeneID:121353557"
ORIGIN      
        1 mscnslcvps cgvatpapla dtsnepcvrq cpdstvviqp pasvvtfpgp ilssfpqqsa
       61 vgsagapyvg agsggafgsr ggsggfggfg gfgsyggygg fggygscgrg srsfggscgp
      121 c
//
LOCUS       XP_041323397             760 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323397
VERSION     XP_041323397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467463.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..760
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X1"
                     /calculated_mol_wt=78259
     Region          15..>345
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <188..>380
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          449..561
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..760
                     /gene="MINDY1"
                     /coded_by="XM_041467463.1:146..2428"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripdagd gipsfgdtip
      301 nagdtipnag dtipsfgdti pgvgdaipna gdtipgvgdt ipnagdtipg vgdgipsfgd
      361 ptpgaspspp gnttgarswg vpsperppgg spqqrqqppe dlgsapgepp eelyhvkwir
      421 wkgqrtplvt qsqngpcpll alinvlllqw kvklppqtev vtaeelmahl gdcilatqpr
      481 dtseglqlnf qqnisdtmtv lpklstgldv nvrftgvsdf eytpecivfd llniplyhgw
      541 lvdpqspeqv qavgklsynq lvekiitckh asdsglvseg lvaeqflest asqlsfhglc
      601 eltararege lgvffrnnhf stmvkhqghl yllvtdqgfl qeegvvwesl hsvdgdscfc
      661 dsdfhlshpp gkqgapqehr lqqrqvdqdy mvalslqqgq dppsvlsdle larqlqheey
      721 qqhhphphhp hphhphpaap qplpaqrrsr qrldsdctll
//
LOCUS       XP_041323398             760 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323398
VERSION     XP_041323398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..760
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X1"
                     /calculated_mol_wt=78259
     Region          15..>345
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <188..>380
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          449..561
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..760
                     /gene="MINDY1"
                     /coded_by="XM_041467464.1:165..2447"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripdagd gipsfgdtip
      301 nagdtipnag dtipsfgdti pgvgdaipna gdtipgvgdt ipnagdtipg vgdgipsfgd
      361 ptpgaspspp gnttgarswg vpsperppgg spqqrqqppe dlgsapgepp eelyhvkwir
      421 wkgqrtplvt qsqngpcpll alinvlllqw kvklppqtev vtaeelmahl gdcilatqpr
      481 dtseglqlnf qqnisdtmtv lpklstgldv nvrftgvsdf eytpecivfd llniplyhgw
      541 lvdpqspeqv qavgklsynq lvekiitckh asdsglvseg lvaeqflest asqlsfhglc
      601 eltararege lgvffrnnhf stmvkhqghl yllvtdqgfl qeegvvwesl hsvdgdscfc
      661 dsdfhlshpp gkqgapqehr lqqrqvdqdy mvalslqqgq dppsvlsdle larqlqheey
      721 qqhhphphhp hphhphpaap qplpaqrrsr qrldsdctll
//
LOCUS       XP_041323399             760 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323399
VERSION     XP_041323399.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467465.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..760
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X2"
                     /calculated_mol_wt=78259
     Region          15..>345
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <188..>380
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          449..561
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..760
                     /gene="MINDY1"
                     /coded_by="XM_041467465.1:100..2382"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripdagd gipsfgdtip
      301 nagdtipnag dtipsfgdti pgvgdaipna gdtipgvgdt ipnagdtipg vgdgipsfgd
      361 ptpgaspspp gnttgarswg vpsperppgg spqqrqqppe dlgsapgepp eelyhvkwir
      421 wkgqrtplvt qsqngpcpll alinvlllqw kvklppqtev vtaeelmahl gdcilatqpr
      481 dtseglqlnf qqnisdtmtv lpklstgldv nvrftgvsdf eytpecivfd llniplyhgw
      541 lvdpqspeqv qavgklsynq lvekiitckh asdsglvseg lvaeqflest asqlsfhglc
      601 eltararege lgvffrnnhf stmvkhqghl yllvtdqgfl qeegvvwesl hsvdgdscfc
      661 dsdfhlshpp gkqgapqehr lqqrqvdqdy mvalslqqgq dppsvlsdle larqlqheey
      721 qqhhphphhp hphhphpaap qplpaqrrsr qrldsdctll
//
LOCUS       XP_041323400             746 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323400
VERSION     XP_041323400.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467466.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..746
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X3"
                     /calculated_mol_wt=76987
     Region          <15..>331
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <223..>366
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          435..547
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..746
                     /gene="MINDY1"
                     /coded_by="XM_041467466.1:100..2340"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna gdtipgvgdr ipdagdgips fgdtipnagd tipnagdtip
      301 sfgdtipgvg daipnagdti pgvgdtipna gdtipgvgdg ipsfgdptpg aspsppgntt
      361 garswgvpsp erppggspqq rqqppedlgs apgeppeely hvkwirwkgq rtplvtqsqn
      421 gpcpllalin vlllqwkvkl ppqtevvtae elmahlgdci latqprdtse glqlnfqqni
      481 sdtmtvlpkl stgldvnvrf tgvsdfeytp ecivfdllni plyhgwlvdp qspeqvqavg
      541 klsynqlvek iitckhasds glvseglvae qflestasql sfhglcelta raregelgvf
      601 frnnhfstmv khqghlyllv tdqgflqeeg vvweslhsvd gdscfcdsdf hlshppgkqg
      661 apqehrlqqr qvdqdymval slqqgqdpps vlsdlelarq lqheeyqqhh phphhphphh
      721 phpaapqplp aqrrsrqrld sdctll
//
LOCUS       XP_041323401             746 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323401
VERSION     XP_041323401.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467467.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..746
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X4"
                     /calculated_mol_wt=76673
     Region          15..>345
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <188..>380
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          449..561
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..746
                     /gene="MINDY1"
                     /coded_by="XM_041467467.1:100..2340"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripdagd gipsfgdtip
      301 nagdtipnag dtipsfgdti pgvgdaipna gdtipgvgdt ipnagdtipg vgdgipsfgd
      361 ptpgaspspp gnttgarswg vpsperppgg spqqrqqppe dlgsapgepp eelyhvkwir
      421 wkgqrtplvt qsqngpcpll alinvlllqw kvklppqtev vtaeelmahl gdcilatqpr
      481 dtseglqlnf qqnisdtmtv lpklstgldv nvrftgvsdf eytpecivfd llniplyhgw
      541 lvdpqspeqv qavgklsynq lvekiitckh asdsglvseg lvaeqflest asqlsfhglc
      601 eltararege lgvffrnnhf stmvkhqeeg vvweslhsvd gdscfcdsdf hlshppgkqg
      661 apqehrlqqr qvdqdymval slqqgqdpps vlsdlelarq lqheeyqqhh phphhphphh
      721 phpaapqplp aqrrsrqrld sdctll
//
LOCUS       XP_041323402             732 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323402
VERSION     XP_041323402.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467468.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X5"
                     /calculated_mol_wt=75543
     Region          <160..>352
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          421..533
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..732
                     /gene="MINDY1"
                     /coded_by="XM_041467468.1:100..2298"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdripgv
      121 rdeipnvgdg ipgvgdrtpg vrdeipgagd gipglgdeip sagdgipsvg hgipsvgdgi
      181 pglgdeipgv gdgipgaggt isdvgdgips agdtipgvgd gipsfgdaip naggtipgag
      241 dtipsfgdti pgvgdripda gdgipsfgdt ipnagdtipn agdtipsfgd tipgvgdaip
      301 nagdtipgvg dtipnagdti pgvgdgipsf gdptpgasps ppgnttgars wgvpsperpp
      361 ggspqqrqqp pedlgsapge ppeelyhvkw irwkgqrtpl vtqsqngpcp llalinvlll
      421 qwkvklppqt evvtaeelma hlgdcilatq prdtseglql nfqqnisdtm tvlpklstgl
      481 dvnvrftgvs dfeytpeciv fdllniplyh gwlvdpqspe qvqavgklsy nqlvekiitc
      541 khasdsglvs eglvaeqfle stasqlsfhg lceltarare gelgvffrnn hfstmvkhqg
      601 hlyllvtdqg flqeegvvwe slhsvdgdsc fcdsdfhlsh ppgkqgapqe hrlqqrqvdq
      661 dymvalslqq gqdppsvlsd lelarqlqhe eyqqhhphph hphphhphpa apqplpaqrr
      721 srqrldsdct ll
//
LOCUS       XP_041323404             294 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323404
VERSION     XP_041323404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X6"
                     /calculated_mol_wt=32930
     Region          <1..95
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..294
                     /gene="MINDY1"
                     /coded_by="XM_041467470.1:417..1301"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 mahlgdcila tqprdtsegl qlnfqqnisd tmtvlpklst gldvnvrftg vsdfeytpec
       61 ivfdllnipl yhgwlvdpqs peqvqavgkl synqlvekii tckhasdsgl vseglvaeqf
      121 lestasqlsf hglceltara regelgvffr nnhfstmvkh qghlyllvtd qgflqeegvv
      181 weslhsvdgd scfcdsdfhl shppgkqgap qehrlqqrqv dqdymvalsl qqgqdppsvl
      241 sdlelarqlq heeyqqhhph phhphphhph paapqplpaq rrsrqrldsd ctll
//
LOCUS       XP_041323405             709 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323405
VERSION     XP_041323405.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467471.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X7"
                     /calculated_mol_wt=72566
     Region          15..>345
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <188..>380
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          449..561
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..709
                     /gene="MINDY1"
                     /coded_by="XM_041467471.1:100..2229"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripdagd gipsfgdtip
      301 nagdtipnag dtipsfgdti pgvgdaipna gdtipgvgdt ipnagdtipg vgdgipsfgd
      361 ptpgaspspp gnttgarswg vpsperppgg spqqrqqppe dlgsapgepp eelyhvkwir
      421 wkgqrtplvt qsqngpcpll alinvlllqw kvklppqtev vtaeelmahl gdcilatqpr
      481 dtseglqlnf qqnisdtmtv lpklstgldv nvrftgvsdf eytpecivfd llniplyhgw
      541 lvdpqspeqv qavgklsynq lvekiitckh asdsglghly llvtdqgflq eegvvweslh
      601 svdgdscfcd sdfhlshppg kqgapqehrl qqrqvdqdym valslqqgqd ppsvlsdlel
      661 arqlqheeyq qhhphphhph phhphpaapq plpaqrrsrq rldsdctll
//
LOCUS       XP_041323406             678 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323406
VERSION     XP_041323406.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467472.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..678
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..678
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X8"
                     /calculated_mol_wt=69241
     Region          15..>345
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <188..>380
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <361..>407
                     /region_name="QWRF"
                     /note="QWRF family; pfam04484"
                     /db_xref="CDD:461327"
     Region          449..545
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..678
                     /gene="MINDY1"
                     /coded_by="XM_041467472.1:100..2136"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripdagd gipsfgdtip
      301 nagdtipnag dtipsfgdti pgvgdaipna gdtipgvgdt ipnagdtipg vgdgipsfgd
      361 ptpgaspspp gnttgarswg vpsperppgg spqqrqqppe dlgsapgepp eelyhvkwir
      421 wkgqrtplvt qsqngpcpll alinvlllqw kvklppqtev vtaeelmahl gdcilatqpr
      481 dtseglqlnf qqnisdtmtv lpklstgldv nvrftgvsdf eytpecivfd llniplyhgw
      541 lvdpqghlyl lvtdqgflqe egvvweslhs vdgdscfcds dfhlshppgk qgapqehrlq
      601 qrqvdqdymv alslqqgqdp psvlsdlela rqlqheeyqq hhphphhphp hhphpaapqp
      661 lpaqrrsrqr ldsdctll
//
LOCUS       XP_041323407             590 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323407
VERSION     XP_041323407.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467473.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..590
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X9"
                     /calculated_mol_wt=59134
     Region          15..>345
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          <188..>380
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <361..>407
                     /region_name="QWRF"
                     /note="QWRF family; pfam04484"
                     /db_xref="CDD:461327"
     Region          449..561
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..590
                     /gene="MINDY1"
                     /coded_by="XM_041467473.1:100..1872"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripdagd gipsfgdtip
      301 nagdtipnag dtipsfgdti pgvgdaipna gdtipgvgdt ipnagdtipg vgdgipsfgd
      361 ptpgaspspp gnttgarswg vpsperppgg spqqrqqppe dlgsapgepp eelyhvkwir
      421 wkgqrtplvt qsqngpcpll alinvlllqw kvklppqtev vtaeelmahl gdcilatqpr
      481 dtseglqlnf qqnisdtmtv lpklstgldv nvrftgvsdf eytpecivfd llniplyhgw
      541 lvdpqspeqv qavgklsynq lvekiitckh asdsglgwwp ssswrarrrs
//
LOCUS       XP_041323408             440 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323408
VERSION     XP_041323408.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467474.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X10"
                     /calculated_mol_wt=42750
     Region          <237..>338
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <319..>365
                     /region_name="QWRF"
                     /note="QWRF family; pfam04484"
                     /db_xref="CDD:461327"
     CDS             1..440
                     /gene="MINDY1"
                     /coded_by="XM_041467474.1:100..1422"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 meqegspqpq qeaeggdgip gagdaipdvg deipgvgdgi pgagggipdv gdsipnigye
       61 ipgagstips agdgipdvgs tipnvgdgip dvgdtipnvg dgipgagdri pgvgdgipgv
      121 mdeipgvgdr ipsigdtipg vgdripgvrd eipnvgdgip gvgdrtpgvr deipgagdgi
      181 pglgdeipsa gdgipsvghg ipsvgdgipg lgdeipgvgd gipgaggtis dvgdgipsag
      241 dtipgvgdgi psfgdaipna ggtipgagdt ipsfgdtipg vgdripsfgd tipsfgdtip
      301 nagdtipgvg dtipsfgdpt pgaspsppgn ttgarswgvp sperppggsp qqrqqppedl
      361 gsapgeppee lyhvkwirwk gqrtplvtqs qngpcpllal invlllqwka srgwggsggt
      421 pnpqgkgprd gpqpplaapr
//
LOCUS       XP_041323409             294 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323409
VERSION     XP_041323409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-1
                     isoform X11"
                     /calculated_mol_wt=32930
     Region          <1..95
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..294
                     /gene="MINDY1"
                     /coded_by="XM_041467475.1:93..977"
                     /db_xref="GeneID:121353558"
ORIGIN      
        1 mahlgdcila tqprdtsegl qlnfqqnisd tmtvlpklst gldvnvrftg vsdfeytpec
       61 ivfdllnipl yhgwlvdpqs peqvqavgkl synqlvekii tckhasdsgl vseglvaeqf
      121 lestasqlsf hglceltara regelgvffr nnhfstmvkh qghlyllvtd qgflqeegvv
      181 weslhsvdgd scfcdsdfhl shppgkqgap qehrlqqrqv dqdymvalsl qqgqdppsvl
      241 sdlelarqlq heeyqqhhph phhphphhph paapqplpaq rrsrqrldsd ctll
//
LOCUS       XP_041323411             122 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323411
VERSION     XP_041323411.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467477.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..122
                     /product="scale keratin-like"
                     /calculated_mol_wt=12116
     Region          3..83
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..122
                     /gene="LOC121353560"
                     /coded_by="XM_041467477.1:1..369"
                     /db_xref="GeneID:121353560"
ORIGIN      
        1 mscydlcptt ggiscpqpva nscnepcvrq cpdstaliqp ppvvvtfpgp ilssfpqqav
       61 vgsagtpafg gslgfgslyg sgafpgysar sgygisalas gscgpsvsrr fsrlfrgscg
      121 pc
//
LOCUS       XP_041323412             591 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional repressor p66-beta [Pyrgilauda ruficollis].
ACCESSION   XP_041323412
VERSION     XP_041323412.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467478.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..591
                     /product="transcriptional repressor p66-beta"
                     /calculated_mol_wt=64300
     Region          156..195
                     /region_name="P66_CC"
                     /note="Coiled-coil and interaction region of P66A and P66B
                     with MBD2; pfam16563"
                     /db_xref="CDD:465178"
     Region          418..452
                     /region_name="GATA"
                     /note="GATA zinc finger; pfam00320"
                     /db_xref="CDD:425605"
     CDS             1..591
                     /gene="GATAD2B"
                     /coded_by="XM_041467478.1:2..1777"
                     /db_xref="GeneID:121353561"
ORIGIN      
        1 mdrmtedalr lnllkrslep aeeredvlak rlkmegheam erlkmlallk rkdlaglevp
       61 helpvkpdgi kgyeeklngs lrphgdgrsa arpgkenind epvdmsarrs dqdrgrltps
      121 pdiivlsdne assprsssrm eerlkaanle mfkgksleer qqlikqlrde lrleearlvl
      181 lkklrqsqlq kenvvqktpv vqnaasivqp spahvgqqgl skipsrpgaq gvepqnlrtl
      241 qghsvirsaa ssalphmlms qrviapspaq lqgqrgpqkp glvrsstpgm spainyqpqs
      301 gssvpcqrss ssaiymnlas hmqpgsvarv ssplpspsal sdaansqaaa klalrkqlek
      361 tlleipppkp papllhflps aansefiymv gleevvqsvi dsqgksapav prvepfvcaq
      421 crtdftphwk qekggrilce qcqtsnqkka lkaehtnrlk nafvkalqqe qeieqrlqqq
      481 aalsptaapa vpsvgkqdgi lrhhtlrqap qpqsslqrgi ptsarsmlsn faqapqlsva
      541 ggllgmpgvn iaylnagigg hkassladrq reylldmipp rsisqsisgq k
//
LOCUS       XP_041323413             130 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323413
VERSION     XP_041323413.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467479.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..130
                     /product="scale keratin-like"
                     /calculated_mol_wt=13033
     Region          14..>76
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..130
                     /gene="LOC121353562"
                     /coded_by="XM_041467479.1:7..399"
                     /db_xref="GeneID:121353562"
ORIGIN      
        1 mscydlcppk tsadlcpprt svavpqpiae scnelcarqc pdssafiqpp pvvvtfpgpi
       61 lssfpqqavv gssgapafgg slglgglyga gatqasgglc tfgrayaapa cspcavprys
      121 kkfwdtcgpc
//
LOCUS       XP_041323414             684 aa            linear   VRT 06-MAY-2021
DEFINITION  U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323414
VERSION     XP_041323414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467480.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="U4/U6 small nuclear ribonucleoprotein Prp3
                     isoform X1"
                     /calculated_mol_wt=77270
     Region          3..76
                     /region_name="PWI"
                     /note="domain in splicing factors; smart00311"
                     /db_xref="CDD:214609"
     Region          308..522
                     /region_name="PRP3"
                     /note="pre-mRNA processing factor 3 (PRP3); pfam08572"
                     /db_xref="CDD:462524"
     Region          545..674
                     /region_name="DUF1115"
                     /note="Protein of unknown function (DUF1115); pfam06544"
                     /db_xref="CDD:461943"
     CDS             1..684
                     /gene="PRPF3"
                     /coded_by="XM_041467480.1:110..2164"
                     /db_xref="GeneID:121353563"
ORIGIN      
        1 mslskrelde lkpwiektvk rvlgfseptv vtaalncvgk gmdkkkaadh lkpflddstl
       61 rfvdklfeav eegrssrhsk snsdrnrkre lkdvfgddse vskessgvkk rriprfeeve
      121 depevipgpp sespgmltkl qikqmmeaat rqieerkkql sfispptpqp kissssqser
      181 lpigntiqps qaatfmndai ekarkaaelq ariqaqlalk pglignanmv glanlhamgi
      241 appkvelkdq tkptplilde qgrtvdasgk eielthrmpt lkaniravkr eqfkqqlkek
      301 psedmesnty fdprvsitpa qrqkrtfkfh ekgkfekiaq rlrtkaqlek lqaeisqaar
      361 ktgihtstkl alitpkkelk egeipeieww dsyiipngld lkggttskkd eyfgitnlve
      421 hpaqlnppvd sdtpvtlgvy ltkkeqkklr rqtrreaqke lqekvrlglm pppepkvris
      481 nlmrvlgtea vqdptkveah vraqmakrqk aheeanaark ltaeqrkakk vkklkedvsq
      541 gvhiavyrvr nlsnpakkfk ieanagqlyl tgvvvlhkdv nvvvveggpk aqkkfkrlml
      601 hrikwdeqts ntkgedddes deesvkktnk cslvwegtak drsfgemkfk qcptenmare
      661 hfkkhsaehy wdlalsesvl estd
//
LOCUS       XP_041323415             549 aa            linear   VRT 06-MAY-2021
DEFINITION  U4/U6 small nuclear ribonucleoprotein Prp3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323415
VERSION     XP_041323415.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467481.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..549
                     /product="U4/U6 small nuclear ribonucleoprotein Prp3
                     isoform X2"
                     /calculated_mol_wt=62061
     Region          173..387
                     /region_name="PRP3"
                     /note="pre-mRNA processing factor 3 (PRP3); pfam08572"
                     /db_xref="CDD:462524"
     Region          410..539
                     /region_name="DUF1115"
                     /note="Protein of unknown function (DUF1115); pfam06544"
                     /db_xref="CDD:461943"
     CDS             1..549
                     /gene="PRPF3"
                     /coded_by="XM_041467481.1:221..1870"
                     /db_xref="GeneID:121353563"
ORIGIN      
        1 mltklqikqm meaatrqiee rkkqlsfisp ptpqpkisss sqserlpign tiqpsqaatf
       61 mndaiekark aaelqariqa qlalkpglig nanmvglanl hamgiappkv elkdqtkptp
      121 lildeqgrtv dasgkeielt hrmptlkani ravkreqfkq qlkekpsedm esntyfdprv
      181 sitpaqrqkr tfkfhekgkf ekiaqrlrtk aqleklqaei sqaarktgih tstklalitp
      241 kkelkegeip eiewwdsyii pngldlkggt tskkdeyfgi tnlvehpaql nppvdsdtpv
      301 tlgvyltkke qkklrrqtrr eaqkelqekv rlglmpppep kvrisnlmrv lgteavqdpt
      361 kveahvraqm akrqkaheea naarkltaeq rkakkvkklk edvsqgvhia vyrvrnlsnp
      421 akkfkieana gqlyltgvvv lhkdvnvvvv eggpkaqkkf krlmlhrikw deqtsntkge
      481 dddesdeesv kktnkcslvw egtakdrsfg emkfkqcpte nmarehfkkh saehywdlal
      541 sesvlestd
//
LOCUS       XP_041323416             108 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A13 [Pyrgilauda ruficollis].
ACCESSION   XP_041323416
VERSION     XP_041323416.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467482.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..108
                     /product="protein S100-A13"
                     /calculated_mol_wt=12032
     Region          20..108
                     /region_name="S-100A13"
                     /note="S-100A13 domain found in proteins similar to
                     S100A13. S100A13 is a calcium-binding protein belonging to
                     a large S100 vertebrate-specific protein family within the
                     EF-hand superfamily of calcium-binding proteins. Note that
                     the S-100 hierarchy, to which...; cd05022"
                     /db_xref="CDD:240149"
     Site            order(20..23,25..26,28..29,32,54,58,61,86,90,93,96..98,
                     100..101)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240149"
     Site            order(37,42,45,50,77,79,81,83,88)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:240149"
     Site            101..108
                     /site_type="active"
                     /note="putative FGF-1 binding site [active]"
                     /db_xref="CDD:240149"
     CDS             1..108
                     /gene="S100A13"
                     /coded_by="XM_041467482.1:380..706"
                     /db_xref="GeneID:121353564"
ORIGIN      
        1 mataeptept epteppmelt eleaaieriv tvfvtfaake gkkgtltage fkelvrlqlp
       61 nlmkdvpsle ekmseldvnn deelrfgeyw rligelakav rrdkagkk
//
LOCUS       XP_041323417              99 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A14 [Pyrgilauda ruficollis].
ACCESSION   XP_041323417
VERSION     XP_041323417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..99
                     /product="protein S100-A14"
                     /calculated_mol_wt=11253
     Region          17..94
                     /region_name="S-100A13"
                     /note="S-100A13 domain found in proteins similar to
                     S100A13. S100A13 is a calcium-binding protein belonging to
                     a large S100 vertebrate-specific protein family within the
                     EF-hand superfamily of calcium-binding proteins. Note that
                     the S-100 hierarchy, to which...; cd05022"
                     /db_xref="CDD:240149"
     Site            order(17..20,22..23,25..26,29,50,54,57,82,86,89,92..94)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240149"
     Site            order(34,38,41,46,73,75,77,79,84)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:240149"
     CDS             1..99
                     /gene="S100A14"
                     /coded_by="XM_041467483.1:662..961"
                     /db_xref="GeneID:121353565"
ORIGIN      
        1 mgqcncrkkr kdcqeltdve raietvisqf hcyavkgqke yltpnemqel vvqklphlgk
       61 cvgpleekie cmgdpneakl efgeywdmmg daakgcrrk
//
LOCUS       XP_041323418              94 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323418
VERSION     XP_041323418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467484.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..94
                     /product="protein S100-A1"
                     /calculated_mol_wt=10391
     Region          2..93
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(3..20,26..28,37..38,40..42,70..73,75..76,78..81,
                     83..90)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(20,25,28,33..34,63,65,67,69,71,74)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..94
                     /gene="S100A1"
                     /coded_by="XM_041467484.1:822..1106"
                     /db_xref="GeneID:121353566"
ORIGIN      
        1 mgsqlegame tlinvfhhys gkegdkykls kkelkellqs elgcfletqk dagavekimq
       61 dldengdgev dfqefvvlva altvacntff wena
//
LOCUS       XP_041323419              94 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323419
VERSION     XP_041323419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..94
                     /product="protein S100-A1"
                     /calculated_mol_wt=10391
     Region          2..93
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(3..20,26..28,37..38,40..42,70..73,75..76,78..81,
                     83..90)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(20,25,28,33..34,63,65,67,69,71,74)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..94
                     /gene="S100A1"
                     /coded_by="XM_041467485.1:79..363"
                     /db_xref="GeneID:121353566"
ORIGIN      
        1 mgsqlegame tlinvfhhys gkegdkykls kkelkellqs elgcfletqk dagavekimq
       61 dldengdgev dfqefvvlva altvacntff wena
//
LOCUS       XP_041323420             130 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323420
VERSION     XP_041323420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..130
                     /product="scale keratin-like"
                     /calculated_mol_wt=13013
     Region          14..>76
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..130
                     /gene="LOC121353568"
                     /coded_by="XM_041467486.1:7..399"
                     /db_xref="GeneID:121353568"
ORIGIN      
        1 mscydlcppk tsadlcpprt svavpqpiae scnelcarqc pdssafiqpp pvvvtfpgpi
       61 lssfpqqavv gssgapafgg slglgglyga gatqasgglc tfgrayaapa cspcalprys
      121 kklwdtcgpc
//
LOCUS       XP_041323421             110 aa            linear   VRT 06-MAY-2021
DEFINITION  feather beta keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323421
VERSION     XP_041323421.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467487.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..110
                     /product="feather beta keratin-like"
                     /calculated_mol_wt=10845
     Region          3..79
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..110
                     /gene="LOC121353569"
                     /coded_by="XM_041467487.1:10..342"
                     /db_xref="GeneID:121353569"
ORIGIN      
        1 mscydlcapt scgptplans cnepcvrqcq dstyviqpsp vvvtlpgpil ssfpqntavg
       61 ssasaavgda lsaggvpins gsssglgslg ysglgglygr syrrsnrcgp
//
LOCUS       XP_041323423             336 aa            linear   VRT 06-MAY-2021
DEFINITION  carbonic anhydrase 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041323423
VERSION     XP_041323423.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467489.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="carbonic anhydrase 14"
                     /calculated_mol_wt=36626
     Region          29..281
                     /region_name="alpha_CA"
                     /note="Carbonic anhydrase alpha (vertebrate-like) group.
                     Carbonic anhydrases (CAs) are zinc-containing enzymes that
                     catalyze the reversible hydration of carbon dioxide in a
                     two-step mechanism: a nucleophilic attack of a zinc-bound
                     hydroxide ion on carbon...; cl00012"
                     /db_xref="CDD:469577"
     Site            order(84,107,109,111,122,135,217)
                     /site_type="active"
                     /db_xref="CDD:239397"
     Site            order(109,111,135)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:239397"
     CDS             1..336
                     /gene="CA14"
                     /coded_by="XM_041467489.1:23..1033"
                     /db_xref="GeneID:121353570"
ORIGIN      
        1 mlsvllllgg lapalpaagp hwtyegphgq qhwheghpec ggraqspidi ataraqpdps
       61 lpplrpegye hpespeltla nnghtavlal ppslrlrglp rafaavqlhf hwgrpghaag
      121 aehlldghra paemhvvhfd terfadasaa qqhpgglavl gvllevgdep hpaydnilrh
      181 lgniryagqt vaipsfsird llpaqleryy ryngslttpp cfqsvlwtlf pqpvrisraq
      241 leqlqgslys teegeqeqpq llvdnfrapq elnqrpvlss fprepegyst geviaivfga
      301 vagcvglfla vhfgakrmra rraqaqdvvf kassrr
//
LOCUS       XP_041323424             292 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-secretase subunit APH-1A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323424
VERSION     XP_041323424.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467490.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..292
                     /product="gamma-secretase subunit APH-1A isoform X1"
                     /calculated_mol_wt=30351
     Region          3..260
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..292
                     /gene="APH1A"
                     /coded_by="XM_041467490.1:29..907"
                     /db_xref="GeneID:121353571"
ORIGIN      
        1 mgaavllgca aialgpaaal vlltvaaepl lvivllagaf fwllsllaas llwsvsvqls
       61 gredaallpl gaaaavllqe lcrfgcfkml kkadeglail sedgrspisl rqmaygeqsp
      121 gcciqlscps lsppglwrpp dpgsptvsgl sfgiisgvfs itniladsag pgtvgihgds
      181 pyffitsafl tmalvllhtf wgiiffdace rrragglglv vgshlltsgl tflnpwyeas
      241 lgpifiltlc tglwafstag gsfynvlkcl sckqepegqa mlysalqvpp eg
//
LOCUS       XP_041323425             261 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-secretase subunit APH-1A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323425
VERSION     XP_041323425.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467491.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="gamma-secretase subunit APH-1A isoform X2"
                     /calculated_mol_wt=27204
     Region          3..229
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..261
                     /gene="APH1A"
                     /coded_by="XM_041467491.1:29..814"
                     /db_xref="GeneID:121353571"
ORIGIN      
        1 mgaavllgca aialgpaaal vlltvaaepl lvivllagaf fwllsllaas llwsvsvqls
       61 gredaallpl gaaaavllqe lcrfgcfkml kkadeglail sedgrspisl rqmayvsgls
      121 fgiisgvfsi tniladsagp gtvgihgdsp yffitsaflt malvllhtfw giiffdacer
      181 rragglglvv gshlltsglt flnpwyeasl gpifiltlct glwafstagg sfynvlkcls
      241 ckqepegqam lysalqvppe g
//
LOCUS       XP_041323426             239 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-secretase subunit APH-1A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323426
VERSION     XP_041323426.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467492.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..239
                     /product="gamma-secretase subunit APH-1A isoform X3"
                     /calculated_mol_wt=24629
     Region          3..207
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..239
                     /gene="APH1A"
                     /coded_by="XM_041467492.1:17..736"
                     /db_xref="GeneID:121353571"
ORIGIN      
        1 mgaavllgca aialgpaaal vlltvaaepl lvivllagka deglailsed grspislrqm
       61 aygeqspgcc iqlscpslsp pglwrppdpg sptvsglsfg iisgvfsitn iladsagpgt
      121 vgihgdspyf fitsafltma lvllhtfwgi iffdacerrr agglglvvgs hlltsgltfl
      181 npwyeaslgp ifiltlctgl wafstaggsf ynvlkclsck qepegqamly salqvppeg
//
LOCUS       XP_041323427             208 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-secretase subunit APH-1A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323427
VERSION     XP_041323427.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467493.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="gamma-secretase subunit APH-1A isoform X4"
                     /calculated_mol_wt=21482
     Region          3..176
                     /region_name="Aph-1"
                     /note="Aph-1 protein; pfam06105"
                     /db_xref="CDD:461830"
     CDS             1..208
                     /gene="APH1A"
                     /coded_by="XM_041467493.1:17..643"
                     /db_xref="GeneID:121353571"
ORIGIN      
        1 mgaavllgca aialgpaaal vlltvaaepl lvivllagka deglailsed grspislrqm
       61 ayvsglsfgi isgvfsitni ladsagpgtv gihgdspyff itsafltmal vllhtfwgii
      121 ffdacerrra gglglvvgsh lltsgltfln pwyeaslgpi filtlctglw afstaggsfy
      181 nvlkclsckq epegqamlys alqvppeg
//
LOCUS       XP_041323428             118 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A7A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323428
VERSION     XP_041323428.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467494.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="protein S100-A7A-like"
                     /calculated_mol_wt=13164
     Region          20..104
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cl08302"
                     /db_xref="CDD:415501"
     Site            order(20..35,41..43,52..53,55..57,87..90,92..93,95..98,
                     100..104)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(35,40,43,48..49,80,82,84,86,88,91)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..118
                     /gene="LOC121353572"
                     /coded_by="XM_041467494.1:177..533"
                     /db_xref="GeneID:121353572"
ORIGIN      
        1 mststhshag srqlpgnctl ekslqtivdm fhqysvrqge idllsiddfk tllteqapsf
       61 lstcdrnqag yldklfqetd lnkdkelsfe eftivlskla ddahrishgs ercgpdkd
//
LOCUS       XP_041323429             155 aa            linear   VRT 06-MAY-2021
DEFINITION  feather keratin B-4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323429
VERSION     XP_041323429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467495.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="feather keratin B-4-like"
                     /calculated_mol_wt=15207
     Region          9..>71
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..155
                     /gene="LOC121353573"
                     /coded_by="XM_041467495.1:1..468"
                     /db_xref="GeneID:121353573"
ORIGIN      
        1 mssygqllsa rcaspcevtc aqpyvdacse pcvascgdsr aivyappvvv tfpgpiissc
       61 ptesivgssi peigggmgsg gggmgsgggg mgsgggmgsg gggmgsgggg sscgggmsrl
      121 gslyrgsyfs gygrnyypyf srgyyryryg nygpf
//
LOCUS       XP_041323430              97 aa            linear   VRT 06-MAY-2021
DEFINITION  protein S100-A11 [Pyrgilauda ruficollis].
ACCESSION   XP_041323430
VERSION     XP_041323430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..97
                     /product="protein S100-A11"
                     /calculated_mol_wt=10756
     Region          2..90
                     /region_name="S-100A11"
                     /note="S-100A11 domain found in proteins similar to
                     S100A11. S100A11 is a member of the S-100 domain family
                     within EF-hand Ca2+-binding proteins superfamily. Note
                     that the S-100 hierarchy, to which this S-100A11 group
                     belongs, contains only S-100 EF-hand...; cd05023"
                     /db_xref="CDD:240150"
     Site            order(3,5..6,8..13,15..17,27,37,41..45,72..73,76..77,
                     79..81,83..84,87..90)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:240150"
     Site            order(20,23,25,28,33,63,65,67,69,74)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:240150"
     Site            order(42,44..45,48..49,54,82,85..86,89..90)
                     /site_type="active"
                     /note="annexin I binding site [active]"
                     /db_xref="CDD:240150"
     CDS             1..97
                     /gene="S100A11"
                     /coded_by="XM_041467496.1:130..423"
                     /db_xref="GeneID:121353574"
ORIGIN      
        1 mptetercie sllavfqrya gregdactls krefrafmdt elaaftknqk dpgvvdrmmk
       61 kldmnsdgql dfqeflnlig giavachdsl vlkspkp
//
LOCUS       XP_041323432            1016 aa            linear   VRT 06-MAY-2021
DEFINITION  trichohyalin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323432
VERSION     XP_041323432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1016
                     /product="trichohyalin-like"
                     /calculated_mol_wt=121606
     Region          2..86
                     /region_name="S-100"
                     /note="S-100 domain, which represents the largest family
                     within the superfamily of proteins carrying the Ca-binding
                     EF-hand motif. Note that this S-100 hierarchy contains
                     only S-100 EF-hand domains, other EF-hands have been
                     modeled separately. S100 proteins are...; cd00213"
                     /db_xref="CDD:238131"
     Site            order(2..19,25..27,36..37,39..41,69..72,74..75,77..80,
                     82..86)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238131"
     Site            order(19,24,27,32..33,62,64,66,68,70,73)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238131"
     CDS             1..1016
                     /gene="LOC121353575"
                     /coded_by="XM_041467498.1:1..3051"
                     /db_xref="GeneID:121353575"
ORIGIN      
        1 mspfldsiat ivgvfqqhar gdgdgsglsr rrmreliqre fadslvkphd pqtiekilqf
       61 lewdgdgdid fneflllvfr vakccfwfqs rapflvqrtk lptggkslqe pefrsrgsrr
      121 qfqeeeqtwe rnreaelqgd vrvgeveise darrdqqerr trsrkdvepr gepipreyre
      181 rsqepceqre srrrrqppep drregerrdr egpreeelad vrtgrqrqep qarpdrwsrq
      241 epgrdertqr prgadgegdn rprepelvre ersrhrrrel eqrelegrsc raaelecpes
      301 rrphqsylee pleidlgecg raepeergyg qrtkrerele sverereire eqereerddr
      361 rrkgrmrerr vdqerelevd vserrtwerr ereireiedd grrqrepvry erereisvaa
      421 aeadikvhre irergeelrr rerpcedeee aeterrisrv reeaarkrri drqrelevea
      481 serrtrerea evarvrqret rerrerdire aevdarreqe vydrrreisv eaaeadvkvr
      541 reirerepre elrrrerpce deeeaeperr isrvreealr erridrqqel evserrirer
      601 eaevsrvgrr etqerrerdi reaevdarre qvydrrreis veaaeadvkv rreiqerepr
      661 eelrrrerpc ereeeaeper risqvreree avrerrinre qeleasecrs rrtrdreaev
      721 titdqreard eirlevleee deeeleqgqc ryqtldvdtg dlcppgqevp vsdlrvryrp
      781 adpdvrpevr llpepvepqt vaylvhviqn ledpkaatye ivchqpgqrg qpvcvrtcsv
      841 sprppsdrqg hpeappskcq enrevldepr ersgkevkdg alrdsaepea vkgervkske
      901 irrrpeipev eqdqpqgeep qkvprepgsg cqrreredse arscvppecr daerrdpges
      961 rregiqeaqe apeeepskrs prepgssqvs reggtkqgqe ppqeapsrpr deskts
//
LOCUS       XP_041323433             108 aa            linear   VRT 06-MAY-2021
DEFINITION  scale keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323433
VERSION     XP_041323433.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467499.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..108
                     /product="scale keratin-like"
                     /calculated_mol_wt=10972
     Region          12..77
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..108
                     /gene="LOC121353576"
                     /coded_by="XM_041467499.1:1..327"
                     /db_xref="GeneID:121353576"
ORIGIN      
        1 mssyrqssss rclapcaisc pqpcadtwnq pcvtscgdsr avihpppvvi tfpgpilssc
       61 pqesivgssa psnflgsgnf lgsggsygsy sygrsyssyg ssgscrpc
//
LOCUS       XP_041323434             169 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich protein 9-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323434
VERSION     XP_041323434.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467500.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..169
                     /product="proline-rich protein 9-like"
                     /calculated_mol_wt=17782
     CDS             1..169
                     /gene="LOC121353577"
                     /coded_by="XM_041467500.1:1..510"
                     /db_xref="GeneID:121353577"
ORIGIN      
        1 msyyyeqckq pclpppclqk ctkcpepctt qcvevcqapc atqcatscvt qcvepcatqc
       61 ttscapqcvd vcakpcssqc vevcapqcvd vcptqcatsc apqcvdvcat qcdtscapqc
      121 vdvcpaqcpa qcpepcvtkc veqcqaevck tkcvescetv clepcsrpc
//
LOCUS       XP_041323435              96 aa            linear   VRT 06-MAY-2021
DEFINITION  putative small proline-rich protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323435
VERSION     XP_041323435.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467501.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="putative small proline-rich protein 5"
                     /calculated_mol_wt=10897
     CDS             1..96
                     /gene="LOC121353578"
                     /coded_by="XM_041467501.1:1..291"
                     /db_xref="GeneID:121353578"
ORIGIN      
        1 mcsrrschsh etscheshss chdsrpschy tiqrqpvqkf tyvtpccapv qpcyppmqry
       61 cppvqpccpp vqrycppvcp qvtknicklp psypky
//
LOCUS       XP_041323436             105 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin-associated protein 5-4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323436
VERSION     XP_041323436.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467502.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..105
                     /product="keratin-associated protein 5-4-like"
                     /calculated_mol_wt=10110
     CDS             1..105
                     /gene="LOC121353579"
                     /coded_by="XM_041467502.1:1..318"
                     /db_xref="GeneID:121353579"
ORIGIN      
        1 mcsrqekdqc hrqqrqssgg chssggggch ssggggchss ggssggchss ggggchssgg
       61 ggchssgggg chssggsgch gkpqmqgqqq qqqqqvpqmp qqkmk
//
LOCUS       XP_041323437             392 aa            linear   VRT 06-MAY-2021
DEFINITION  loricrin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323437
VERSION     XP_041323437.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467503.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="loricrin-like"
                     /calculated_mol_wt=33944
     CDS             1..392
                     /gene="LOC121353580"
                     /coded_by="XM_041467503.1:1..1179"
                     /db_xref="GeneID:121353580"
ORIGIN      
        1 mcsrqssggc hgmssqssgc hsggssyqsq gssccggggg sgkiiissgg ggggsccsgg
       61 ssgygigggy gggssgsksi igggssggss gccsggsygm gggygggssg sksiigggss
      121 ggssgccsgg sygmgggygg ssgsksiivg ggssgccsgg sssygmgggy ggssgsksii
      181 gggssggssg ccsggsygmg ggyggssgsk siivgggsgg ssgycgggss gygmggecgg
      241 vssgtkiilg egssggssgc cgggssygmg ggyggssgsk siivgggsgg ssgycgggss
      301 gygmgggygg gysggktiig ggssggssgc ygggssygmg ggcssgssgq tiiissgggg
      361 ggssqqkcpi vipsvvshqt kqssywpygq qk
//
LOCUS       XP_041323438             101 aa            linear   VRT 06-MAY-2021
DEFINITION  sperm mitochondrial-associated cysteine-rich protein-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323438
VERSION     XP_041323438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467504.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..101
                     /product="sperm mitochondrial-associated cysteine-rich
                     protein-like"
                     /calculated_mol_wt=11228
     CDS             1..101
                     /gene="LOC121353581"
                     /coded_by="XM_041467504.1:1..306"
                     /db_xref="GeneID:121353581"
ORIGIN      
        1 mcsrgschdy esschgsrss chgssschsr pschytiqrq pvqkftyvtp ccapvqpcyp
       61 pmqrycppvq pccppvqryc ppvcpqvtkn icklppsypk y
//
LOCUS       XP_041323439              57 aa            linear   VRT 06-MAY-2021
DEFINITION  cortexin domain containing 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323439
VERSION     XP_041323439.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467505.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..57
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..57
                     /product="cortexin domain containing 2"
                     /calculated_mol_wt=6048
     Region          <31..>54
                     /region_name="Cortexin"
                     /note="Cortexin of kidney; pfam11057"
                     /db_xref="CDD:314086"
     CDS             1..57
                     /gene="CTXND2"
                     /coded_by="XM_041467505.1:1..174"
                     /db_xref="GeneID:121353583"
ORIGIN      
        1 metptalpam dvdkavataf vvllglflla mtvrcarlvv dpysaiptst weeepin
//
LOCUS       XP_041323440             120 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin-associated protein 17-1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323440
VERSION     XP_041323440.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467506.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..120
                     /product="keratin-associated protein 17-1-like"
                     /calculated_mol_wt=11504
     CDS             1..120
                     /gene="LOC121353584"
                     /coded_by="XM_041467506.1:1..363"
                     /db_xref="GeneID:121353584"
ORIGIN      
        1 mcsrqdkdqc hqqerscchs ggsschgssg gsgchgssgg sscqrssggs gchgssggsg
       61 chrssgsgch sssgsgchvt sgsgchgssg sgchgssggs chgkqqecqq qiyqvssnmk
//
LOCUS       XP_041323441              70 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin-associated protein 4-3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323441
VERSION     XP_041323441.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467507.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..70
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..70
                     /product="keratin-associated protein 4-3-like"
                     /calculated_mol_wt=7148
     CDS             1..70
                     /gene="LOC121353585"
                     /coded_by="XM_041467507.1:1..213"
                     /db_xref="GeneID:121353585"
ORIGIN      
        1 mpngccgggn nysvccyssp rccktpmccs pmqccspccm pmqsccmpms ccytisnnns
       61 gccgssccgn
//
LOCUS       XP_041323443             115 aa            linear   VRT 06-MAY-2021
DEFINITION  putative small proline-rich protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323443
VERSION     XP_041323443.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467509.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520096.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..115
                     /product="putative small proline-rich protein 5"
                     /calculated_mol_wt=12964
     CDS             1..115
                     /gene="LOC121353586"
                     /coded_by="XM_041467509.1:1..348"
                     /db_xref="GeneID:121353586"
ORIGIN      
        1 mcsrgschdy esschgsrss chrsgfschr srsschepep scryiqrqpv qkctyvmpcc
       61 ppvqrycppv pccppvqryc ppapcypqvp ccpqvpycpq ytkniwnlpp actky
//
LOCUS       XP_041323444             155 aa            linear   VRT 06-MAY-2021
DEFINITION  serpin B6-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323444
VERSION     XP_041323444.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467510.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520152.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..155
                     /product="serpin B6-like"
     Region          21..>154
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     CDS             1..155
                     /gene="LOC121353588"
                     /coded_by="XM_041467510.1:<1..469"
                     /codon_start=2
                     /db_xref="GeneID:121353588"
ORIGIN      
        1 havasvfreg ketavdvvcv qvlslknaqd ahngyqslls eindpntkyi lrtanrlyge
       61 ktfeflpsft essqksyhag leqmdflhaw edarkqingw vekrtegkiq nllaegilns
      121 ltrlvlvnai yfkgnweeqf nkqstrerpf qinkv
//
LOCUS       XP_041323446             624 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323446
VERSION     XP_041323446.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467512.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="autophagy-related protein 16-1 isoform X1"
                     /calculated_mol_wt=69691
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          237..621
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          344..381
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          387..423
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          428..465
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..503
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          508..544
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          554..590
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          597..621
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..624
                     /gene="ATG16L1"
                     /coded_by="XM_041467512.1:454..2328"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpveprddd
      241 ievladetsd taeetspvra vsrtsskrls qpagglldsi snifglsesp llghqssdta
      301 rrrslssfpa pqdnaephpg askevrvptt aicvfdahdg evnavqfspg srllatggmd
      361 rrvklwevlg drcepkgsls gsnagitsie fdsagsylla asndfasriw tvddnrlrht
      421 ltghsgkvls akflldnari vsgshdrtlk lwdlrskvci ktvfagsscn divcteqcvm
      481 sghfdkkirf wdirtesivk elellgrita ldlnpertel ltcsrddllk iidlrvgavk
      541 qtfsaqgfkc gsdwtrvvfs pdgnyvaags adgalyiwnv ltgklertla khhsssinav
      601 twspagthvv svdkgnkavl waef
//
LOCUS       XP_041323447             623 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323447
VERSION     XP_041323447.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467513.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="autophagy-related protein 16-1 isoform X2"
                     /calculated_mol_wt=69534
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          217..620
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          343..380
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          386..422
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          427..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          472..502
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          507..543
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          553..589
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          596..620
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..623
                     /gene="ATG16L1"
                     /coded_by="XM_041467513.1:454..2325"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpvepdddi
      241 evladetsdt aeetspvrav srtsskrlsq pagglldsis nifglsespl lghqssdtar
      301 rrslssfpap qdnaephpga skevrvptta icvfdahdge vnavqfspgs rllatggmdr
      361 rvklwevlgd rcepkgslsg snagitsief dsagsyllaa sndfasriwt vddnrlrhtl
      421 tghsgkvlsa kflldnariv sgshdrtlkl wdlrskvcik tvfagsscnd ivcteqcvms
      481 ghfdkkirfw dirtesivke lellgrital dlnpertell tcsrddllki idlrvgavkq
      541 tfsaqgfkcg sdwtrvvfsp dgnyvaagsa dgalyiwnvl tgklertlak hhsssinavt
      601 wspagthvvs vdkgnkavlw aef
//
LOCUS       XP_041323448             608 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323448
VERSION     XP_041323448.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467514.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="autophagy-related protein 16-1 isoform X3"
                     /calculated_mol_wt=68011
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          212..605
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          328..365
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          371..407
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          412..449
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          457..487
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          492..528
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          538..574
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          581..605
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..608
                     /gene="ATG16L1"
                     /coded_by="XM_041467514.1:454..2280"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpveprddd
      241 ievladetsd taeetspvra vsrtsskrls qpagglldsi snifgrrsls sfpapqdnae
      301 phpgaskevr vpttaicvfd ahdgevnavq fspgsrllat ggmdrrvklw evlgdrcepk
      361 gslsgsnagi tsiefdsags yllaasndfa sriwtvddnr lrhtltghsg kvlsakflld
      421 narivsgshd rtlklwdlrs kvciktvfag sscndivcte qcvmsghfdk kirfwdirte
      481 sivkelellg ritaldlnpe rtelltcsrd dllkiidlrv gavkqtfsaq gfkcgsdwtr
      541 vvfspdgnyv aagsadgaly iwnvltgkle rtlakhhsss inavtwspag thvvsvdkgn
      601 kavlwaef
//
LOCUS       XP_041323450             607 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323450
VERSION     XP_041323450.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467516.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="autophagy-related protein 16-1 isoform X4"
                     /calculated_mol_wt=67855
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          257..604
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          327..364
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          370..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          411..448
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          456..486
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          491..527
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          537..573
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          580..604
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..607
                     /gene="ATG16L1"
                     /coded_by="XM_041467516.1:455..2278"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpvepdddi
      241 evladetsdt aeetspvrav srtsskrlsq pagglldsis nifgrrslss fpapqdnaep
      301 hpgaskevrv pttaicvfda hdgevnavqf spgsrllatg gmdrrvklwe vlgdrcepkg
      361 slsgsnagit siefdsagsy llaasndfas riwtvddnrl rhtltghsgk vlsakflldn
      421 arivsgshdr tlklwdlrsk vciktvfags scndivcteq cvmsghfdkk irfwdirtes
      481 ivkelellgr italdlnper telltcsrdd llkiidlrvg avkqtfsaqg fkcgsdwtrv
      541 vfspdgnyva agsadgalyi wnvltgkler tlakhhsssi navtwspagt hvvsvdkgnk
      601 avlwaef
//
LOCUS       XP_041323451             605 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323451
VERSION     XP_041323451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..605
                     /product="autophagy-related protein 16-1 isoform X5"
                     /calculated_mol_wt=67735
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          202..602
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          325..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          368..404
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          409..446
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          454..484
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          489..525
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          535..571
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          578..602
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..605
                     /gene="ATG16L1"
                     /coded_by="XM_041467517.1:454..2271"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpveprddd
      241 ievladetsd taeetspvra vsrtsslses pllghqssdt arrrslssfp apqdnaephp
      301 gaskevrvpt taicvfdahd gevnavqfsp gsrllatggm drrvklwevl gdrcepkgsl
      361 sgsnagitsi efdsagsyll aasndfasri wtvddnrlrh tltghsgkvl sakflldnar
      421 ivsgshdrtl klwdlrskvc iktvfagssc ndivcteqcv msghfdkkir fwdirtesiv
      481 kelellgrit aldlnperte lltcsrddll kiidlrvgav kqtfsaqgfk cgsdwtrvvf
      541 spdgnyvaag sadgalyiwn vltgklertl akhhsssina vtwspagthv vsvdkgnkav
      601 lwaef
//
LOCUS       XP_041323452             604 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323452
VERSION     XP_041323452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..604
                     /product="autophagy-related protein 16-1 isoform X6"
                     /calculated_mol_wt=67579
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          212..601
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          324..361
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          367..403
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          408..445
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          453..483
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          488..524
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          534..570
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          577..601
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..604
                     /gene="ATG16L1"
                     /coded_by="XM_041467518.1:455..2269"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpvepdddi
      241 evladetsdt aeetspvrav srtsslsesp llghqssdta rrrslssfpa pqdnaephpg
      301 askevrvptt aicvfdahdg evnavqfspg srllatggmd rrvklwevlg drcepkgsls
      361 gsnagitsie fdsagsylla asndfasriw tvddnrlrht ltghsgkvls akflldnari
      421 vsgshdrtlk lwdlrskvci ktvfagsscn divcteqcvm sghfdkkirf wdirtesivk
      481 elellgrita ldlnpertel ltcsrddllk iidlrvgavk qtfsaqgfkc gsdwtrvvfs
      541 pdgnyvaags adgalyiwnv ltgklertla khhsssinav twspagthvv svdkgnkavl
      601 waef
//
LOCUS       XP_041323453             589 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041323453
VERSION     XP_041323453.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467519.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="autophagy-related protein 16-1 isoform X7"
                     /calculated_mol_wt=65496
     Region          1..171
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          202..586
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          309..346
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          352..388
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          393..430
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..468
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..509
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          519..555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          562..586
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..589
                     /gene="ATG16L1"
                     /coded_by="XM_041467519.1:122..1891"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 mpinnkllek sdlhavladk lqaekydiqs rheispghds twndaqlqel aqlkikhqee
       61 ltelhkkrge laqsvidlnn qmqqkdkemq mneakiaeyl qkiseletec qelrsklqdl
      121 eranqtlkde ydalqitfna leeklrktte dnqelvsrwm aekaqeanrl naenekdsrr
      181 rqarlqkela eaakeplpve prdddievla detsdtaeet spvravsrts skrlsqpagg
      241 lldsisnifg lsespllghq ssdtarrrsl ssfpapqdna ephpgaskev rvpttaicvf
      301 dahdgevnav qfspgsrlla tggmdrrvkl wevlgdrcep kgslsgsnag itsiefdsag
      361 syllaasndf asriwtvddn rlrhtltghs gkvlsakfll dnarivsgsh drtlklwdlr
      421 skvciktvfa gsscndivct eqcvmsghfd kkirfwdirt esivkelell gritaldlnp
      481 ertelltcsr ddllkiidlr vgavkqtfsa qgfkcgsdwt rvvfspdgny vaagsadgal
      541 yiwnvltgkl ertlakhhss sinavtwspa gthvvsvdkg nkavlwaef
//
LOCUS       XP_041323454             589 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041323454
VERSION     XP_041323454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="autophagy-related protein 16-1 isoform X8"
                     /calculated_mol_wt=66125
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          <299..586
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          309..346
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          352..388
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          393..430
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..468
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          473..509
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          519..555
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          562..586
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..589
                     /gene="ATG16L1"
                     /coded_by="XM_041467520.1:454..2223"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpveprddd
      241 ievladetsd taeetspvra vsrtsrrrsl ssfpapqdna ephpgaskev rvpttaicvf
      301 dahdgevnav qfspgsrlla tggmdrrvkl wevlgdrcep kgslsgsnag itsiefdsag
      361 syllaasndf asriwtvddn rlrhtltghs gkvlsakfll dnarivsgsh drtlklwdlr
      421 skvciktvfa gsscndivct eqcvmsghfd kkirfwdirt esivkelell gritaldlnp
      481 ertelltcsr ddllkiidlr vgavkqtfsa qgfkcgsdwt rvvfspdgny vaagsadgal
      541 yiwnvltgkl ertlakhhss sinavtwspa gthvvsvdkg nkavlwaef
//
LOCUS       XP_041323455             588 aa            linear   VRT 06-MAY-2021
DEFINITION  autophagy-related protein 16-1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323455
VERSION     XP_041323455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..588
                     /product="autophagy-related protein 16-1 isoform X9"
                     /calculated_mol_wt=65968
     Region          31..206
                     /region_name="ATG16"
                     /note="Autophagy protein 16 (ATG16); pfam08614"
                     /db_xref="CDD:462536"
     Region          <298..585
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          308..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          351..387
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          392..429
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          437..467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          472..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          518..554
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          561..585
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..588
                     /gene="ATG16L1"
                     /coded_by="XM_041467521.1:454..2220"
                     /db_xref="GeneID:121353591"
ORIGIN      
        1 masglraagf ppwkrhiaee lrrrdrlqrq afeeiiaqyn klleksdlha vladklqaek
       61 ydiqsrheis pghdstwnda qlqelaqlki khqeeltelh kkrgelaqsv idlnnqmqqk
      121 dkemqmneak iaeylqkise letecqelrs klqdleranq tlkdeydalq itfnaleekl
      181 rkttednqel vsrwmaekaq eanrlnaene kdsrrrqarl qkelaeaake plpvepdddi
      241 evladetsdt aeetspvrav srtsrrrsls sfpapqdnae phpgaskevr vpttaicvfd
      301 ahdgevnavq fspgsrllat ggmdrrvklw evlgdrcepk gslsgsnagi tsiefdsags
      361 yllaasndfa sriwtvddnr lrhtltghsg kvlsakflld narivsgshd rtlklwdlrs
      421 kvciktvfag sscndivcte qcvmsghfdk kirfwdirte sivkelellg ritaldlnpe
      481 rtelltcsrd dllkiidlrv gavkqtfsaq gfkcgsdwtr vvfspdgnyv aagsadgaly
      541 iwnvltgkle rtlakhhsss inavtwspag thvvsvdkgn kavlwaef
//
LOCUS       XP_041323456             420 aa            linear   VRT 06-MAY-2021
DEFINITION  S-arrestin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323456
VERSION     XP_041323456.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467522.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="S-arrestin isoform X1"
                     /calculated_mol_wt=46549
     Region          65..220
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          239..400
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..420
                     /gene="SAG"
                     /coded_by="XM_041467522.1:376..1638"
                     /db_xref="GeneID:121353592"
ORIGIN      
        1 msstcfsqas gtghlgtekl hsttvtslsl tmscpesqkt giggknadsp qkqvifrkst
       61 rdkaltiylg kqdfidnign vepvdgvvlv dpaiikgkkv fvsltcvfry gqedidvigl
      121 afrrdlffsr vqvyppadkp qsltllqesl lkklgknayp ffftfpdylp csvclqpapr
      181 dvdktcgvdf evkafstenv eerihrrnsa rllirkvqya pespgpqpca ettwqffmsn
      241 kplhlkacls kevyyhgepi pvtvtinnnt ektvkkikvq veqvanvvly ssdfytkvva
      301 aeeaqekvqp nssltktltv lpllannret reialdgklk dedtnlasst iikdgidktv
      361 mgilvsykik vkltvpgilg dltssevgte lpfrlmhpkp eeknpavkqs wclrsllvrs
//
LOCUS       XP_041323457             416 aa            linear   VRT 06-MAY-2021
DEFINITION  S-arrestin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323457
VERSION     XP_041323457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="S-arrestin isoform X2"
                     /calculated_mol_wt=45950
     Region          65..220
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          239..400
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..416
                     /gene="SAG"
                     /coded_by="XM_041467523.1:379..1629"
                     /db_xref="GeneID:121353592"
ORIGIN      
        1 msstcfsqas gtghlgtekl hsttvtslsl tmscpesqkt giggknadsp qkqvifrkst
       61 rdkaltiylg kqdfidnign vepvdgvvlv dpaiikgkkv fvsltcvfry gqedidvigl
      121 afrrdlffsr vqvyppadkp qsltllqesl lkklgknayp ffftfpdylp csvclqpapr
      181 dvdktcgvdf evkafstenv eerihrrnsa rllirkvqya pespgpqpca ettwqffmsn
      241 kplhlkacls kevyyhgepi pvtvtinnnt ektvkkikvq veqvanvvly ssdfytkvva
      301 aeeaqekvqp nssltktltv lpllannret reialdgklk dedtnlasst iikdgidktv
      361 mgilvsykik vkltvpgilg dltssevgte lpfrlmhpkp eeknpaaavs kkmklt
//
LOCUS       XP_041323458             389 aa            linear   VRT 06-MAY-2021
DEFINITION  S-arrestin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323458
VERSION     XP_041323458.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467524.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="S-arrestin isoform X3"
                     /calculated_mol_wt=43396
     Region          34..189
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          208..369
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..389
                     /gene="SAG"
                     /coded_by="XM_041467524.1:2575..3744"
                     /db_xref="GeneID:121353592"
ORIGIN      
        1 mscpesqktg iggknadspq kqvifrkstr dkaltiylgk qdfidnignv epvdgvvlvd
       61 paiikgkkvf vsltcvfryg qedidvigla frrdlffsrv qvyppadkpq sltllqesll
      121 kklgknaypf fftfpdylpc svclqpaprd vdktcgvdfe vkafstenve erihrrnsar
      181 llirkvqyap espgpqpcae ttwqffmsnk plhlkaclsk evyyhgepip vtvtinnnte
      241 ktvkkikvqv eqvanvvlys sdfytkvvaa eeaqekvqpn ssltktltvl pllannretr
      301 eialdgklkd edtnlassti ikdgidktvm gilvsykikv kltvpgilgd ltssevgtel
      361 pfrlmhpkpe eknpavkqsw clrsllvrs
//
LOCUS       XP_041323459             440 aa            linear   VRT 06-MAY-2021
DEFINITION  S-arrestin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323459
VERSION     XP_041323459.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467525.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="S-arrestin isoform X4"
                     /calculated_mol_wt=48728
     Region          65..220
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          239..400
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..440
                     /gene="SAG"
                     /coded_by="XM_041467525.1:379..1701"
                     /db_xref="GeneID:121353592"
ORIGIN      
        1 msstcfsqas gtghlgtekl hsttvtslsl tmscpesqkt giggknadsp qkqvifrkst
       61 rdkaltiylg kqdfidnign vepvdgvvlv dpaiikgkkv fvsltcvfry gqedidvigl
      121 afrrdlffsr vqvyppadkp qsltllqesl lkklgknayp ffftfpdylp csvclqpapr
      181 dvdktcgvdf evkafstenv eerihrrnsa rllirkvqya pespgpqpca ettwqffmsn
      241 kplhlkacls kevyyhgepi pvtvtinnnt ektvkkikvq veqvanvvly ssdfytkvva
      301 aeeaqekvqp nssltktltv lpllannret reialdgklk dedtnlasst iikdgidktv
      361 mgilvsykik vkltvpgilg dltssevgte lpfrlmhpkp eeknpagkdg eaelvfeefa
      421 rqklkntpde edknspstde
//
LOCUS       XP_041323461             237 aa            linear   VRT 06-MAY-2021
DEFINITION  EF-hand domain-containing protein D1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323461
VERSION     XP_041323461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="EF-hand domain-containing protein D1"
                     /calculated_mol_wt=26542
     Region          92..150
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(101,103,105,112,137,139,141,148)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     CDS             1..237
                     /gene="EFHD1"
                     /coded_by="XM_041467527.1:108..821"
                     /db_xref="GeneID:121353593"
ORIGIN      
        1 masqelaqkl qrrlqleesg aaaegeaeav kgaaaaeeve erscltasag aelsaklcrr
       61 qdinegaaqp rraavfnpyt efkefsrrqi kdmermfrly dsgrdgyidl melklmmekl
      121 gapqthlglk nmikevdedf dgklsfrefl lifhkaaage leedsglltl aklseidvsi
      181 egvkgaknff eakaqalssa skfeaeikae qderkreeee rkhrraafre lksaftq
//
LOCUS       XP_041323462             744 aa            linear   VRT 06-MAY-2021
DEFINITION  ephexin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323462
VERSION     XP_041323462.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467528.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..744
                     /product="ephexin-1 isoform X1"
                     /calculated_mol_wt=84697
     Region          317..495
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          517..643
                     /region_name="PH_ephexin"
                     /note="Ephexin Pleckstrin homology (PH) domain; cd01221"
                     /db_xref="CDD:269929"
     Region          656..710
                     /region_name="SH3_ephexin1"
                     /note="Src homology 3 domain of the Rho guanine nucleotide
                     exchange factor, ephexin-1 (also called NGEF or ARHGEF27);
                     cd11939"
                     /db_xref="CDD:212872"
     Site            order(661,663,666,670,688..689,704,706..707)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212872"
     CDS             1..744
                     /gene="NGEF"
                     /coded_by="XM_041467528.1:149..2383"
                     /db_xref="GeneID:121353594"
ORIGIN      
        1 meehgreath rlstgglwqg hsqhvlresg svsegeeesa ganpvthegd lhtqyiaiqr
       61 nsryyrsmrl pnrgkrktsr eamhmqhatg slknyepike plnvlshkgs pspansdptt
      121 ldelliqrll psypryrgnr pgspspappp plppellgsr lpppamella aalsaacafd
      181 qdgspgqlsr vpaaaeetha agtgaatpah pmtadswrnl iehigllyqe yrdkstreei
      241 etrrlqdsqt ypeetspsee tpseaestst tenkappqin llrnsnsrfn lwqdlpevqs
      301 sgvlsilqpd eiklqeamfe lvtseasyyk slnllvshfm enerlkkilh qseahilfsn
      361 vldvmavser flldleqrve enivisdvcd ivyqhtvnhf svyityvsnq tyqertykql
      421 lqdkpafrev isqleldpkc kglsfssfli lpfqritrlk llvqnilkkv eeksdresta
      481 ldahkeletv vkacnegvrk msrteqmisi qkklefkiks vpiishsrwl lkqgelqqmn
      541 gpktsrtlrt kklfreiylf lfndllvicr qipgdkyqvf dsaprgllrv eeledqgqsl
      601 anvfilrlle naddreasym lkassqsemk rwmislapnr rtkfvsftsr lvdcpqiqcv
      661 hpyvaqqpde lsleladvln ildktddgwi fgerlhdqer gwfpssmgee ilnpkiraqn
      721 lkecfrvhks ddsqrrklgs rnrq
//
LOCUS       XP_041323463             579 aa            linear   VRT 06-MAY-2021
DEFINITION  ephexin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323463
VERSION     XP_041323463.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467529.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..579
                     /product="ephexin-1 isoform X2"
                     /calculated_mol_wt=66442
     Region          152..330
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          352..478
                     /region_name="PH_ephexin"
                     /note="Ephexin Pleckstrin homology (PH) domain; cd01221"
                     /db_xref="CDD:269929"
     Region          491..545
                     /region_name="SH3_ephexin1"
                     /note="Src homology 3 domain of the Rho guanine nucleotide
                     exchange factor, ephexin-1 (also called NGEF or ARHGEF27);
                     cd11939"
                     /db_xref="CDD:212872"
     Site            order(496,498,501,505,523..524,539,541..542)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212872"
     CDS             1..579
                     /gene="NGEF"
                     /coded_by="XM_041467529.1:271..2010"
                     /db_xref="GeneID:121353594"
ORIGIN      
        1 mellaaalsa acafdqdgsp gqlsrvpaaa eethaagtga atpahpmtad swrnliehig
       61 llyqeyrdks treeietrrl qdsqtypeet spseetpsea eststtenka ppqinllrns
      121 nsrfnlwqdl pevqssgvls ilqpdeiklq eamfelvtse asyykslnll vshfmenerl
      181 kkilhqseah ilfsnvldvm avserflldl eqrveenivi sdvcdivyqh tvnhfsvyit
      241 yvsnqtyqer tykqllqdkp afrevisqle ldpkckglsf ssflilpfqr itrlkllvqn
      301 ilkkveeksd restaldahk eletvvkacn egvrkmsrte qmisiqkkle fkiksvpiis
      361 hsrwllkqge lqqmngpkts rtlrtkklfr eiylflfndl lvicrqipgd kyqvfdsapr
      421 gllrveeled qgqslanvfi lrllenaddr easymlkass qsemkrwmis lapnrrtkfv
      481 sftsrlvdcp qiqcvhpyva qqpdelslel advlnildkt ddgwifgerl hdqergwfps
      541 smgeeilnpk iraqnlkecf rvhksddsqr rklgsrnrq
//
LOCUS       XP_041323464             579 aa            linear   VRT 06-MAY-2021
DEFINITION  ephexin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323464
VERSION     XP_041323464.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467530.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..579
                     /product="ephexin-1 isoform X2"
                     /calculated_mol_wt=66442
     Region          152..330
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          352..478
                     /region_name="PH_ephexin"
                     /note="Ephexin Pleckstrin homology (PH) domain; cd01221"
                     /db_xref="CDD:269929"
     Region          491..545
                     /region_name="SH3_ephexin1"
                     /note="Src homology 3 domain of the Rho guanine nucleotide
                     exchange factor, ephexin-1 (also called NGEF or ARHGEF27);
                     cd11939"
                     /db_xref="CDD:212872"
     Site            order(496,498,501,505,523..524,539,541..542)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212872"
     CDS             1..579
                     /gene="NGEF"
                     /coded_by="XM_041467530.1:170..1909"
                     /db_xref="GeneID:121353594"
ORIGIN      
        1 mellaaalsa acafdqdgsp gqlsrvpaaa eethaagtga atpahpmtad swrnliehig
       61 llyqeyrdks treeietrrl qdsqtypeet spseetpsea eststtenka ppqinllrns
      121 nsrfnlwqdl pevqssgvls ilqpdeiklq eamfelvtse asyykslnll vshfmenerl
      181 kkilhqseah ilfsnvldvm avserflldl eqrveenivi sdvcdivyqh tvnhfsvyit
      241 yvsnqtyqer tykqllqdkp afrevisqle ldpkckglsf ssflilpfqr itrlkllvqn
      301 ilkkveeksd restaldahk eletvvkacn egvrkmsrte qmisiqkkle fkiksvpiis
      361 hsrwllkqge lqqmngpkts rtlrtkklfr eiylflfndl lvicrqipgd kyqvfdsapr
      421 gllrveeled qgqslanvfi lrllenaddr easymlkass qsemkrwmis lapnrrtkfv
      481 sftsrlvdcp qiqcvhpyva qqpdelslel advlnildkt ddgwifgerl hdqergwfps
      541 smgeeilnpk iraqnlkecf rvhksddsqr rklgsrnrq
//
LOCUS       XP_041323465             579 aa            linear   VRT 06-MAY-2021
DEFINITION  ephexin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323465
VERSION     XP_041323465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..579
                     /product="ephexin-1 isoform X2"
                     /calculated_mol_wt=66442
     Region          152..330
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          352..478
                     /region_name="PH_ephexin"
                     /note="Ephexin Pleckstrin homology (PH) domain; cd01221"
                     /db_xref="CDD:269929"
     Region          491..545
                     /region_name="SH3_ephexin1"
                     /note="Src homology 3 domain of the Rho guanine nucleotide
                     exchange factor, ephexin-1 (also called NGEF or ARHGEF27);
                     cd11939"
                     /db_xref="CDD:212872"
     Site            order(496,498,501,505,523..524,539,541..542)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212872"
     CDS             1..579
                     /gene="NGEF"
                     /coded_by="XM_041467531.1:159..1898"
                     /db_xref="GeneID:121353594"
ORIGIN      
        1 mellaaalsa acafdqdgsp gqlsrvpaaa eethaagtga atpahpmtad swrnliehig
       61 llyqeyrdks treeietrrl qdsqtypeet spseetpsea eststtenka ppqinllrns
      121 nsrfnlwqdl pevqssgvls ilqpdeiklq eamfelvtse asyykslnll vshfmenerl
      181 kkilhqseah ilfsnvldvm avserflldl eqrveenivi sdvcdivyqh tvnhfsvyit
      241 yvsnqtyqer tykqllqdkp afrevisqle ldpkckglsf ssflilpfqr itrlkllvqn
      301 ilkkveeksd restaldahk eletvvkacn egvrkmsrte qmisiqkkle fkiksvpiis
      361 hsrwllkqge lqqmngpkts rtlrtkklfr eiylflfndl lvicrqipgd kyqvfdsapr
      421 gllrveeled qgqslanvfi lrllenaddr easymlkass qsemkrwmis lapnrrtkfv
      481 sftsrlvdcp qiqcvhpyva qqpdelslel advlnildkt ddgwifgerl hdqergwfps
      541 smgeeilnpk iraqnlkecf rvhksddsqr rklgsrnrq
//
LOCUS       XP_041323466             379 aa            linear   VRT 06-MAY-2021
DEFINITION  sialidase-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323466
VERSION     XP_041323466.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467532.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..379
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..379
                     /product="sialidase-2"
                     /calculated_mol_wt=42691
     Region          10..370
                     /region_name="Sialidase_non-viral"
                     /note="Non-viral sialidases; cd15482"
                     /db_xref="CDD:271234"
     Region          20..75
                     /region_name="Sialidase propeller 1"
                     /note="Sialidase propeller 1 [structural motif]"
                     /db_xref="CDD:271234"
     Site            order(21,47,219,238,303,333,354)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:271234"
     Region          84..142
                     /region_name="Sialidase propeller 2"
                     /note="Sialidase propeller 2 [structural motif]"
                     /db_xref="CDD:271234"
     Region          156..211
                     /region_name="Sialidase propeller 3"
                     /note="Sialidase propeller 3 [structural motif]"
                     /db_xref="CDD:271234"
     Region          218..259
                     /region_name="Sialidase propeller 4"
                     /note="Sialidase propeller 4 [structural motif]"
                     /db_xref="CDD:271234"
     Region          271..326
                     /region_name="Sialidase propeller 5"
                     /note="Sialidase propeller 5 [structural motif]"
                     /db_xref="CDD:271234"
     Region          332..370
                     /region_name="Sialidase propeller 6"
                     /note="Sialidase propeller 6 [structural motif]"
                     /db_xref="CDD:271234"
     CDS             1..379
                     /gene="NEU2"
                     /coded_by="XM_041467532.1:146..1285"
                     /db_xref="GeneID:121353595"
ORIGIN      
        1 maafpvlgqe tlfrngtwsy ripallylpr fsmilafaee redlvdehak livmrrgvyd
       61 patqhvqwkr metlvsaqle ghrsmnpcpv ydevsgklil ffiavpgkis eqhqlktkin
      121 lvrlcyvtsm dqgrtwsaaq dvtdrtirne yknwatfavg pghglqllne arslvipaya
      181 yrildpkqhp tphafcfiss dhgttwekgn fvgeesavec qvaevhtcgr kvlycnarsn
      241 rgariqavsy nhgldfeggq rvemliepps gchgsvtafp pppdarcqds wllyvhptdp
      301 rgrkdlgiyl nksplnpahw tkpsilfkgl caysdlqymg vgpdgsplfs clfeygthrq
      361 ceeiifvmft lkqafpseh
//
LOCUS       XP_041323467            1277 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323467
VERSION     XP_041323467.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467533.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1277
                     /product="GRB10-interacting GYF protein 2 isoform X1"
                     /calculated_mol_wt=147468
     Region          533..588
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            547..563
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(557,562..563)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1277
                     /gene="GIGYF2"
                     /coded_by="XM_041467533.1:537..4370"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrgrgrg esgfyqrsfd eveggfgrgg gremhrsqsw eergdrrfek pgrkdpvrpn
      181 feeggtvtag rkhefirses enwrifreeq ngededggwr lagsrrdger wrphspdgph
      241 sagwrehmer rrrfefdfrd rddergyrrv rcgsgsmddd rdslpewcle daeeemgtfd
      301 ssgaflslkk vqkepipeeq emdfrpveeg eersdsegsh neeakdhekt kkegekteri
      361 vaeaveeaaq asspaarsdt ppksqppdpl qtnlferkee svpertekte dkenrventl
      421 sakmsnrged laslaqplpq isadtaasah lsppvsnsnp alrpvqtpvt aapgmgnipt
      481 dpddeeglkh leqqaekmva ylqdsaldde rlaakiqehr akgssmplfh eamqkwyykd
      541 pqgeiqgpfs nqemaewfqa gyftmsllvk racdetfqpl gdimkmwgrv pftpgpaplp
      601 hlgeldqerl trqqelaliq mqhlqyqhll iqqqyaqmla qqqkaalssq qqqqlaillq
      661 qfqalkmris eqnmmppvtr svsvpdtgsi welqsasqpt vwegssvwdl pidtaaqgpa
      721 leqlqqleka kaakleqerr evemrakree eerkrqeelr rqqeellrrq qederkrree
      781 eelarrkqee alrrqreqei alrrqreeee rqqqeealrr leerrreeee rrqreelirk
      841 qeeeaakwar eeeeaqrrle esrlrmeeea arqrleeeer krkelelqrq keimrqrqqq
      901 qealrrlqqq qqqqqlaqmk lpssstwgqq snsgacqsqt tlslaeiqkl eeererqlre
      961 eqrrqqrelm kalqqqqqqq qqklsgwgnv tkptgttksl leiqqeearq mqkqqqqqhq
     1021 qpnrvrntth snlhtsigns vwgslntnps nqwasdlvss iwsnadtkns nmgfwddavk
     1081 evgprnstnk nksnaslsks vgitsrqnkk veeeekllkl fqgvnkaqdg ftqwceqmlh
     1141 alntannldv ptfvsflkev espyevhdyi raylgdtpea kefakqfler rakqkasqqr
     1201 qqqqqqdsvw gmnhsslhsv fqtnqsnnqq snfeavqsgk kkkkqkmvra dpsllgfsvn
     1261 asserlnmge ietledy
//
LOCUS       XP_041323468            1277 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323468
VERSION     XP_041323468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467534.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1277
                     /product="GRB10-interacting GYF protein 2 isoform X1"
                     /calculated_mol_wt=147468
     Region          533..588
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            547..563
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(557,562..563)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1277
                     /gene="GIGYF2"
                     /coded_by="XM_041467534.1:126..3959"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrgrgrg esgfyqrsfd eveggfgrgg gremhrsqsw eergdrrfek pgrkdpvrpn
      181 feeggtvtag rkhefirses enwrifreeq ngededggwr lagsrrdger wrphspdgph
      241 sagwrehmer rrrfefdfrd rddergyrrv rcgsgsmddd rdslpewcle daeeemgtfd
      301 ssgaflslkk vqkepipeeq emdfrpveeg eersdsegsh neeakdhekt kkegekteri
      361 vaeaveeaaq asspaarsdt ppksqppdpl qtnlferkee svpertekte dkenrventl
      421 sakmsnrged laslaqplpq isadtaasah lsppvsnsnp alrpvqtpvt aapgmgnipt
      481 dpddeeglkh leqqaekmva ylqdsaldde rlaakiqehr akgssmplfh eamqkwyykd
      541 pqgeiqgpfs nqemaewfqa gyftmsllvk racdetfqpl gdimkmwgrv pftpgpaplp
      601 hlgeldqerl trqqelaliq mqhlqyqhll iqqqyaqmla qqqkaalssq qqqqlaillq
      661 qfqalkmris eqnmmppvtr svsvpdtgsi welqsasqpt vwegssvwdl pidtaaqgpa
      721 leqlqqleka kaakleqerr evemrakree eerkrqeelr rqqeellrrq qederkrree
      781 eelarrkqee alrrqreqei alrrqreeee rqqqeealrr leerrreeee rrqreelirk
      841 qeeeaakwar eeeeaqrrle esrlrmeeea arqrleeeer krkelelqrq keimrqrqqq
      901 qealrrlqqq qqqqqlaqmk lpssstwgqq snsgacqsqt tlslaeiqkl eeererqlre
      961 eqrrqqrelm kalqqqqqqq qqklsgwgnv tkptgttksl leiqqeearq mqkqqqqqhq
     1021 qpnrvrntth snlhtsigns vwgslntnps nqwasdlvss iwsnadtkns nmgfwddavk
     1081 evgprnstnk nksnaslsks vgitsrqnkk veeeekllkl fqgvnkaqdg ftqwceqmlh
     1141 alntannldv ptfvsflkev espyevhdyi raylgdtpea kefakqfler rakqkasqqr
     1201 qqqqqqdsvw gmnhsslhsv fqtnqsnnqq snfeavqsgk kkkkqkmvra dpsllgfsvn
     1261 asserlnmge ietledy
//
LOCUS       XP_041323469            1277 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323469
VERSION     XP_041323469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1277
                     /product="GRB10-interacting GYF protein 2 isoform X1"
                     /calculated_mol_wt=147468
     Region          533..588
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            547..563
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(557,562..563)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1277
                     /gene="GIGYF2"
                     /coded_by="XM_041467535.1:362..4195"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrgrgrg esgfyqrsfd eveggfgrgg gremhrsqsw eergdrrfek pgrkdpvrpn
      181 feeggtvtag rkhefirses enwrifreeq ngededggwr lagsrrdger wrphspdgph
      241 sagwrehmer rrrfefdfrd rddergyrrv rcgsgsmddd rdslpewcle daeeemgtfd
      301 ssgaflslkk vqkepipeeq emdfrpveeg eersdsegsh neeakdhekt kkegekteri
      361 vaeaveeaaq asspaarsdt ppksqppdpl qtnlferkee svpertekte dkenrventl
      421 sakmsnrged laslaqplpq isadtaasah lsppvsnsnp alrpvqtpvt aapgmgnipt
      481 dpddeeglkh leqqaekmva ylqdsaldde rlaakiqehr akgssmplfh eamqkwyykd
      541 pqgeiqgpfs nqemaewfqa gyftmsllvk racdetfqpl gdimkmwgrv pftpgpaplp
      601 hlgeldqerl trqqelaliq mqhlqyqhll iqqqyaqmla qqqkaalssq qqqqlaillq
      661 qfqalkmris eqnmmppvtr svsvpdtgsi welqsasqpt vwegssvwdl pidtaaqgpa
      721 leqlqqleka kaakleqerr evemrakree eerkrqeelr rqqeellrrq qederkrree
      781 eelarrkqee alrrqreqei alrrqreeee rqqqeealrr leerrreeee rrqreelirk
      841 qeeeaakwar eeeeaqrrle esrlrmeeea arqrleeeer krkelelqrq keimrqrqqq
      901 qealrrlqqq qqqqqlaqmk lpssstwgqq snsgacqsqt tlslaeiqkl eeererqlre
      961 eqrrqqrelm kalqqqqqqq qqklsgwgnv tkptgttksl leiqqeearq mqkqqqqqhq
     1021 qpnrvrntth snlhtsigns vwgslntnps nqwasdlvss iwsnadtkns nmgfwddavk
     1081 evgprnstnk nksnaslsks vgitsrqnkk veeeekllkl fqgvnkaqdg ftqwceqmlh
     1141 alntannldv ptfvsflkev espyevhdyi raylgdtpea kefakqfler rakqkasqqr
     1201 qqqqqqdsvw gmnhsslhsv fqtnqsnnqq snfeavqsgk kkkkqkmvra dpsllgfsvn
     1261 asserlnmge ietledy
//
LOCUS       XP_041323470            1277 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323470
VERSION     XP_041323470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1277
                     /product="GRB10-interacting GYF protein 2 isoform X1"
                     /calculated_mol_wt=147468
     Region          533..588
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            547..563
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(557,562..563)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1277
                     /gene="GIGYF2"
                     /coded_by="XM_041467536.1:564..4397"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrgrgrg esgfyqrsfd eveggfgrgg gremhrsqsw eergdrrfek pgrkdpvrpn
      181 feeggtvtag rkhefirses enwrifreeq ngededggwr lagsrrdger wrphspdgph
      241 sagwrehmer rrrfefdfrd rddergyrrv rcgsgsmddd rdslpewcle daeeemgtfd
      301 ssgaflslkk vqkepipeeq emdfrpveeg eersdsegsh neeakdhekt kkegekteri
      361 vaeaveeaaq asspaarsdt ppksqppdpl qtnlferkee svpertekte dkenrventl
      421 sakmsnrged laslaqplpq isadtaasah lsppvsnsnp alrpvqtpvt aapgmgnipt
      481 dpddeeglkh leqqaekmva ylqdsaldde rlaakiqehr akgssmplfh eamqkwyykd
      541 pqgeiqgpfs nqemaewfqa gyftmsllvk racdetfqpl gdimkmwgrv pftpgpaplp
      601 hlgeldqerl trqqelaliq mqhlqyqhll iqqqyaqmla qqqkaalssq qqqqlaillq
      661 qfqalkmris eqnmmppvtr svsvpdtgsi welqsasqpt vwegssvwdl pidtaaqgpa
      721 leqlqqleka kaakleqerr evemrakree eerkrqeelr rqqeellrrq qederkrree
      781 eelarrkqee alrrqreqei alrrqreeee rqqqeealrr leerrreeee rrqreelirk
      841 qeeeaakwar eeeeaqrrle esrlrmeeea arqrleeeer krkelelqrq keimrqrqqq
      901 qealrrlqqq qqqqqlaqmk lpssstwgqq snsgacqsqt tlslaeiqkl eeererqlre
      961 eqrrqqrelm kalqqqqqqq qqklsgwgnv tkptgttksl leiqqeearq mqkqqqqqhq
     1021 qpnrvrntth snlhtsigns vwgslntnps nqwasdlvss iwsnadtkns nmgfwddavk
     1081 evgprnstnk nksnaslsks vgitsrqnkk veeeekllkl fqgvnkaqdg ftqwceqmlh
     1141 alntannldv ptfvsflkev espyevhdyi raylgdtpea kefakqfler rakqkasqqr
     1201 qqqqqqdsvw gmnhsslhsv fqtnqsnnqq snfeavqsgk kkkkqkmvra dpsllgfsvn
     1261 asserlnmge ietledy
//
LOCUS       XP_041323471            1276 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323471
VERSION     XP_041323471.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467537.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1276
                     /product="GRB10-interacting GYF protein 2 isoform X2"
                     /calculated_mol_wt=147339
     Region          532..587
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            546..562
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(556,561..562)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1276
                     /gene="GIGYF2"
                     /coded_by="XM_041467537.1:537..4367"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrgrgrg esgfyqrsfd eveggfgrgg gremhrsqsw eergdrrfek pgrkdpvrpn
      181 feeggtvtag rkhefirses enwrifreeq ngededggwr lagsrrdger wrphspdgph
      241 sagwrehmer rrrfefdfrd rddergyrrv rcgsgsmddd rdslpewcle daeeemgtfd
      301 ssgaflslkk vqkepipeeq emdfrpveeg eersdsegsh neeakdhekt kkegekteri
      361 vaaveeaaqa sspaarsdtp pksqppdplq tnlferkees vpertekted kenrventls
      421 akmsnrgedl aslaqplpqi sadtaasahl sppvsnsnpa lrpvqtpvta apgmgniptd
      481 pddeeglkhl eqqaekmvay lqdsaldder laakiqehra kgssmplfhe amqkwyykdp
      541 qgeiqgpfsn qemaewfqag yftmsllvkr acdetfqplg dimkmwgrvp ftpgpaplph
      601 lgeldqerlt rqqelaliqm qhlqyqhlli qqqyaqmlaq qqkaalssqq qqqlaillqq
      661 fqalkmrise qnmmppvtrs vsvpdtgsiw elqsasqptv wegssvwdlp idtaaqgpal
      721 eqlqqlekak aakleqerre vemrakreee erkrqeelrr qqeellrrqq ederkrreee
      781 elarrkqeea lrrqreqeia lrrqreeeer qqqeealrrl eerrreeeer rqreelirkq
      841 eeeaakware eeeaqrrlee srlrmeeeaa rqrleeeerk rkelelqrqk eimrqrqqqq
      901 ealrrlqqqq qqqqlaqmkl pssstwgqqs nsgacqsqtt lslaeiqkle eererqlree
      961 qrrqqrelmk alqqqqqqqq qklsgwgnvt kptgttksll eiqqeearqm qkqqqqqhqq
     1021 pnrvrntths nlhtsignsv wgslntnpsn qwasdlvssi wsnadtknsn mgfwddavke
     1081 vgprnstnkn ksnaslsksv gitsrqnkkv eeeekllklf qgvnkaqdgf tqwceqmlha
     1141 lntannldvp tfvsflkeve spyevhdyir aylgdtpeak efakqflerr akqkasqqrq
     1201 qqqqqdsvwg mnhsslhsvf qtnqsnnqqs nfeavqsgkk kkkqkmvrad psllgfsvna
     1261 sserlnmgei etledy
//
LOCUS       XP_041323472            1271 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323472
VERSION     XP_041323472.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467538.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1271
                     /product="GRB10-interacting GYF protein 2 isoform X3"
                     /calculated_mol_wt=146903
     Region          527..582
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            541..557
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(551,556..557)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1271
                     /gene="GIGYF2"
                     /coded_by="XM_041467538.1:537..4352"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrgrgrg esgfyqrsfd eveggfgrgg gremhrsqsw eergdrrfek pgrkdpvrpn
      181 feeggtvtag rkhefirses enwrifreeq ngededggwr lagsrrdger wrphspgwre
      241 hmerrrrfef dfrdrdderg yrrvrcgsgs mdddrdslpe wcledaeeem gtfdssgafl
      301 slkkvqkepi peeqemdfrp veegeersds egshneeakd hektkkegek terivaeave
      361 eaaqasspaa rsdtppksqp pdplqtnlfe rkeesvpert ektedkenrv entlsakmsn
      421 rgedlaslaq plpqisadta asahlsppvs nsnpalrpvq tpvtaapgmg niptdpddee
      481 glkhleqqae kmvaylqdsa ldderlaaki qehrakgssm plfheamqkw yykdpqgeiq
      541 gpfsnqemae wfqagyftms llvkracdet fqplgdimkm wgrvpftpgp aplphlgeld
      601 qerltrqqel aliqmqhlqy qhlliqqqya qmlaqqqkaa lssqqqqqla illqqfqalk
      661 mriseqnmmp pvtrsvsvpd tgsiwelqsa sqptvwegss vwdlpidtaa qgpaleqlqq
      721 lekakaakle qerrevemra kreeeerkrq eelrrqqeel lrrqqederk rreeeelarr
      781 kqeealrrqr eqeialrrqr eeeerqqqee alrrleerrr eeeerrqree lirkqeeeaa
      841 kwareeeeaq rrleesrlrm eeeaarqrle eeerkrkele lqrqkeimrq rqqqqealrr
      901 lqqqqqqqql aqmklpssst wgqqsnsgac qsqttlslae iqkleeerer qlreeqrrqq
      961 relmkalqqq qqqqqqklsg wgnvtkptgt tkslleiqqe earqmqkqqq qqhqqpnrvr
     1021 ntthsnlhts ignsvwgsln tnpsnqwasd lvssiwsnad tknsnmgfwd davkevgprn
     1081 stnknksnas lsksvgitsr qnkkveeeek llklfqgvnk aqdgftqwce qmlhalntan
     1141 nldvptfvsf lkevespyev hdyiraylgd tpeakefakq flerrakqka sqqrqqqqqq
     1201 dsvwgmnhss lhsvfqtnqs nnqqsnfeav qsgkkkkkqk mvradpsllg fsvnasserl
     1261 nmgeietled y
//
LOCUS       XP_041323473            1226 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323473
VERSION     XP_041323473.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467539.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1226
                     /product="GRB10-interacting GYF protein 2 isoform X4"
                     /calculated_mol_wt=141612
     Region          482..537
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            496..512
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(506,511..512)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1226
                     /gene="GIGYF2"
                     /coded_by="XM_041467539.1:537..4217"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrvrpnf eeggtvtagr khefirsese nwrifreeqn gededggwrl agsrrdgerw
      181 rphspdgphs agwrehmerr rrfefdfrdr ddergyrrvr cgsgsmdddr dslpewcled
      241 aeeemgtfds sgaflslkkv qkepipeeqe mdfrpveege ersdsegshn eeakdhektk
      301 kegekteriv aeaveeaaqa sspaarsdtp pksqppdplq tnlferkees vpertekted
      361 kenrventls akmsnrgedl aslaqplpqi sadtaasahl sppvsnsnpa lrpvqtpvta
      421 apgmgniptd pddeeglkhl eqqaekmvay lqdsaldder laakiqehra kgssmplfhe
      481 amqkwyykdp qgeiqgpfsn qemaewfqag yftmsllvkr acdetfqplg dimkmwgrvp
      541 ftpgpaplph lgeldqerlt rqqelaliqm qhlqyqhlli qqqyaqmlaq qqkaalssqq
      601 qqqlaillqq fqalkmrise qnmmppvtrs vsvpdtgsiw elqsasqptv wegssvwdlp
      661 idtaaqgpal eqlqqlekak aakleqerre vemrakreee erkrqeelrr qqeellrrqq
      721 ederkrreee elarrkqeea lrrqreqeia lrrqreeeer qqqeealrrl eerrreeeer
      781 rqreelirkq eeeaakware eeeaqrrlee srlrmeeeaa rqrleeeerk rkelelqrqk
      841 eimrqrqqqq ealrrlqqqq qqqqlaqmkl pssstwgqqs nsgacqsqtt lslaeiqkle
      901 eererqlree qrrqqrelmk alqqqqqqqq qklsgwgnvt kptgttksll eiqqeearqm
      961 qkqqqqqhqq pnrvrntths nlhtsignsv wgslntnpsn qwasdlvssi wsnadtknsn
     1021 mgfwddavke vgprnstnkn ksnaslsksv gitsrqnkkv eeeekllklf qgvnkaqdgf
     1081 tqwceqmlha lntannldvp tfvsflkeve spyevhdyir aylgdtpeak efakqflerr
     1141 akqkasqqrq qqqqqdsvwg mnhsslhsvf qtnqsnnqqs nfeavqsgkk kkkqkmvrad
     1201 psllgfsvna sserlnmgei etledy
//
LOCUS       XP_041323475            1223 aa            linear   VRT 06-MAY-2021
DEFINITION  GRB10-interacting GYF protein 2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323475
VERSION     XP_041323475.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467541.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1223
                     /product="GRB10-interacting GYF protein 2 isoform X5"
                     /calculated_mol_wt=140338
     Region          533..588
                     /region_name="GYF"
                     /note="GYF domain: contains conserved Gly-Tyr-Phe
                     residues; Proline-binding domain in CD2-binding and other
                     proteins. Involved in signaling lymphocyte activity. Also
                     present in other unrelated proteins (mainly unknown)
                     derived from diverse eukaryotic species; cd00072"
                     /db_xref="CDD:238027"
     Site            547..563
                     /site_type="active"
                     /note="proline binding motif [active]"
                     /db_xref="CDD:238027"
     Site            order(557,562..563)
                     /site_type="active"
                     /note="proline interaction residues [active]"
                     /db_xref="CDD:238027"
     CDS             1..1223
                     /gene="GIGYF2"
                     /coded_by="XM_041467541.1:537..4208"
                     /db_xref="GeneID:121353596"
ORIGIN      
        1 maaetqtlnf gpewlralss ggsvtsppls palpkyklad yrygreemla lflkdnkips
       61 dlldkeflpi lqeeplppla lvpfteeeqr nfsmsvnsaa vlrltgrggg tvvgaprgrs
      121 ssrgrgrgrg esgfyqrsfd eveggfgrgg gremhrsqsw eergdrrfek pgrkdpvrpn
      181 feeggtvtag rkhefirses enwrifreeq ngededggwr lagsrrdger wrphspdgph
      241 sagwrehmer rrrfefdfrd rddergyrrv rcgsgsmddd rdslpewcle daeeemgtfd
      301 ssgaflslkk vqkepipeeq emdfrpveeg eersdsegsh neeakdhekt kkegekteri
      361 vaeaveeaaq asspaarsdt ppksqppdpl qtnlferkee svpertekte dkenrventl
      421 sakmsnrged laslaqplpq isadtaasah lsppvsnsnp alrpvqtpvt aapgmgnipt
      481 dpddeeglkh leqqaekmva ylqdsaldde rlaakiqehr akgssmplfh eamqkwyykd
      541 pqgeiqgpfs nqemaewfqa gyftmsllvk racdetfqpl gdimkmwgrv pftpgpaplp
      601 hlgeldqerl trqqelaliq mqhlqyqhll iqqqyaqmla qqqkaalssq qqqqlaillq
      661 qfqalkmris eqnmmppvtr svsvpdtgsi welqsasqpt vwegssvwdl pidtaaqgpa
      721 leqlqqleka kaakeealrr qreqeialrr qreeeerqqq eealrrleer rreeeerrqr
      781 eelirkqeee aakwareeee aqrrleesrl rmeeeaarqr leeeerkrke lelqrqkeim
      841 rqrqqqqeal rrlqqqqqqq qlaqmklpss stwgqqsnsg acqsqttlsl aeiqkleeer
      901 erqlreeqrr qqrelmkalq qqqqqqqqkl sgwgnvtkpt gttkslleiq qeearqmqkq
      961 qqqqhqqpnr vrntthsnlh tsignsvwgs lntnpsnqwa sdlvssiwsn adtknsnmgf
     1021 wddavkevgp rnstnknksn aslsksvgit srqnkkveee ekllklfqgv nkaqdgftqw
     1081 ceqmlhalnt annldvptfv sflkevespy evhdyirayl gdtpeakefa kqflerrakq
     1141 kasqqrqqqq qqdsvwgmnh sslhsvfqtn qsnnqqsnfe avqsgkkkkk qkmvradpsl
     1201 lgfsvnasse rlnmgeietl edy
//
LOCUS       XP_041323476             424 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: inward rectifier potassium channel 13
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323476
VERSION     XP_041323476.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467542.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="LOW QUALITY PROTEIN: inward rectifier potassium
                     channel 13"
                     /calculated_mol_wt=46836
     Region          84..227
                     /region_name="IRK"
                     /note="Inward rectifier potassium channel transmembrane
                     domain; pfam01007"
                     /db_xref="CDD:460023"
     Region          234..387
                     /region_name="IRK_C"
                     /note="Inward rectifier potassium channel C-terminal
                     domain; pfam17655"
                     /db_xref="CDD:465439"
     CDS             1..424
                     /gene="KCNJ13"
                     /coded_by="XM_041467542.1:1..1275"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121353598"
ORIGIN      
        1 mrhtnpflkv lgvffxslpn tcgkflasag tstpdqssps pgaqvipssc tktlxrlkmt
       61 tdtresnntk csaplltqry lrlvtkdghs tfqmagaqgr gvaylrdvwg ilmdmrwrwm
      121 mlvfsasfvi hwlvfavlwy llaemngdle ldhdappdnh ticvkyitsf taafsfslet
      181 qltigygtmf psgdcpsaia llaiqmvlgl mleafltgaf vakiarpknr alsirfsrsa
      241 vvthgegkpq lmfqvantrs spltsvqisa ilyqeqesgq lhqtsidfhl dsvtadecpf
      301 fifpltyyhs itassplaal lqreaphhfe lvvflsavqe gtgetcqrrt sylpseilvy
      361 hrfasllarn akgeyqtkme nfdktipelp aapdsrspkr tdkeiringq hidsfqlset
      421 glte
//
LOCUS       XP_041323477             129 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SNORC isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323477
VERSION     XP_041323477.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467543.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="protein SNORC isoform X1"
                     /calculated_mol_wt=13505
     Region          33..129
                     /region_name="DUF4690"
                     /note="Small Novel Rich in Cartilage; pfam15756"
                     /db_xref="CDD:464849"
     CDS             1..129
                     /gene="SNORC"
                     /coded_by="XM_041467543.1:1175..1564"
                     /db_xref="GeneID:121353599"
ORIGIN      
        1 mlflrkampy hrvlrlvllt lcsilvpavl aaeypqdavp tlwneppelp sgagpfdaat
       61 starlsdata fppytselep edtthlhrld tgdgslgpga igaiviasll gtsvlvalvv
      121 itlrkfsas
//
LOCUS       XP_041323478             129 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SNORC isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323478
VERSION     XP_041323478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="protein SNORC isoform X1"
                     /calculated_mol_wt=13505
     Region          33..129
                     /region_name="DUF4690"
                     /note="Small Novel Rich in Cartilage; pfam15756"
                     /db_xref="CDD:464849"
     CDS             1..129
                     /gene="SNORC"
                     /coded_by="XM_041467544.1:1223..1612"
                     /db_xref="GeneID:121353599"
ORIGIN      
        1 mlflrkampy hrvlrlvllt lcsilvpavl aaeypqdavp tlwneppelp sgagpfdaat
       61 starlsdata fppytselep edtthlhrld tgdgslgpga igaiviasll gtsvlvalvv
      121 itlrkfsas
//
LOCUS       XP_041323479             129 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SNORC isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323479
VERSION     XP_041323479.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467545.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="protein SNORC isoform X1"
                     /calculated_mol_wt=13505
     Region          33..129
                     /region_name="DUF4690"
                     /note="Small Novel Rich in Cartilage; pfam15756"
                     /db_xref="CDD:464849"
     CDS             1..129
                     /gene="SNORC"
                     /coded_by="XM_041467545.1:1206..1595"
                     /db_xref="GeneID:121353599"
ORIGIN      
        1 mlflrkampy hrvlrlvllt lcsilvpavl aaeypqdavp tlwneppelp sgagpfdaat
       61 starlsdata fppytselep edtthlhrld tgdgslgpga igaiviasll gtsvlvalvv
      121 itlrkfsas
//
LOCUS       XP_041323480             128 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SNORC isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323480
VERSION     XP_041323480.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467546.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..128
                     /product="protein SNORC isoform X2"
                     /calculated_mol_wt=13434
     Region          32..128
                     /region_name="DUF4690"
                     /note="Small Novel Rich in Cartilage; pfam15756"
                     /db_xref="CDD:464849"
     CDS             1..128
                     /gene="SNORC"
                     /coded_by="XM_041467546.1:1175..1561"
                     /db_xref="GeneID:121353599"
ORIGIN      
        1 mlflrkampy hrvlrlvllt lcsilvpavl aeypqdavpt lwneppelps gagpfdaats
       61 tarlsdataf ppytselepe dtthlhrldt gdgslgpgai gaiviasllg tsvlvalvvi
      121 tlrkfsas
//
LOCUS       XP_041323481             128 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SNORC isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323481
VERSION     XP_041323481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..128
                     /product="protein SNORC isoform X2"
                     /calculated_mol_wt=13434
     Region          32..128
                     /region_name="DUF4690"
                     /note="Small Novel Rich in Cartilage; pfam15756"
                     /db_xref="CDD:464849"
     CDS             1..128
                     /gene="SNORC"
                     /coded_by="XM_041467547.1:1223..1609"
                     /db_xref="GeneID:121353599"
ORIGIN      
        1 mlflrkampy hrvlrlvllt lcsilvpavl aeypqdavpt lwneppelps gagpfdaats
       61 tarlsdataf ppytselepe dtthlhrldt gdgslgpgai gaiviasllg tsvlvalvvi
      121 tlrkfsas
//
LOCUS       XP_041323482            1213 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323482
VERSION     XP_041323482.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467548.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1213
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1213
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     5-phosphatase 1"
                     /calculated_mol_wt=137399
     Region          1..103
                     /region_name="SH2_SHIP"
                     /note="Src homology 2 (SH2) domain found in SH2-containing
                     inositol-5'-phosphatase (SHIP) and SLAM-associated protein
                     (SAP); cd10343"
                     /db_xref="CDD:198206"
     Site            order(12,31,52,54)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198206"
     Site            order(52..53,65..66,71,74,90..92)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198206"
     Region          403..709
                     /region_name="INPP5c_SHIP1-INPP5D"
                     /note="Catalytic inositol polyphosphate 5-phosphatase
                     (INPP5c) domain of SH2 domain containing inositol
                     polyphosphate 5-phosphatase-1 and related proteins;
                     cd09100"
                     /db_xref="CDD:197334"
     Site            order(411,413,452,519..520,540,543..544,586,588,590,
                     643..644,666,672,699..700)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197334"
     Site            order(411,452,540,586,588,672,699..700)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197334"
     Site            order(452,519..520,540,543..544,590,643..644,666,699)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197334"
     Site            order(452,699)
                     /site_type="other"
                     /note="putative Mg binding site [ion binding]"
                     /db_xref="CDD:197334"
     Site            order(540,588,700)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197334"
     CDS             1..1213
                     /gene="INPP5D"
                     /coded_by="XM_041467548.1:57..3698"
                     /db_xref="GeneID:121353600"
ORIGIN      
        1 mdqcwyhgni trsraedlls kvgkdgsflv rasesiasay alcvlyrncv ytyrilpdke
       61 nklivqaseg vpvryfqnle elieyykken mglvwhlkyp vpreeeeaad eleedtdlvp
      121 tppvlpprni lmalpssetk evsslpensr aadvnklsls etllqrlqyq dtssvsdehl
      181 kliqdylrvh iisdfemvqt gsnnlpqlkk lltalckglf seasrtlpsl esiqkvfeqq
      241 lhpgahqrsq mlgeaspvni vlklnqlisl lssieekvkt lliegpdsth rrslippvtf
      301 evktdslgif skmqlkvdve mgkliikrsk dgpedkfyth kkilqliksq kvpnklvivl
      361 etekektqrk eyifsdskkr egfcqllqqm knkhseqpep dmitifigtw nmgaapapkk
      421 itswflskgq grtrddtady iphdiyvigt qedpqgekew letlrqslqe itsisfkvia
      481 ihtlwniriv vlakpehenr ishictanvk tgiantlgnk gavgvsfmfn gtsfgfvnsh
      541 ltsgsekkhr rnqnytnilr fltlgdkkls pfnithrfth lfwlgdlnyr veqppteaen
      601 iiqkirqqqy pellafdqll lerrdqkvfl qfeeeeitfa ptyrfergtr ekyvytkqka
      661 tgmkynlpsw cdrvlwksyp mvhvvcqsyg cttdimtsdh spvfatfevg vtsqfvsknd
      721 skytdsqgei eflhcyatlk tksqtkfyie fhssclesfv ksqegenedg negelvvkfv
      781 ealpkmtqni svlcfsvpas lspccplgeg cialrieate slapihtvlt hhgektgifq
      841 geiklqtsqg kqreklydfv kierdeitgq kpknisnlep nkdwdpanrk sksthlmare
      901 aaaiarywgs avsspdspgk edilrstttd isnpnylgma sfsqqpsatc qlkqtssseq
      961 ppslwnyeqq skentslmgq shssstspsl splspkpslq ptanrsicnw nqeyqlpdmg
     1021 kstaepvlqe egqqrpemfe nplygsmgsk gkvapkkeqe ypkalwkeqp plpeqschlt
     1081 kpqepecskt fgkqpsppfl vptqrfrsyt ssyqleeknt geknqgkpkm ttplensapl
     1141 kklmkpsrae vslsiqgqqn kpplpsksra vldmqnskgr dyrdsselph sgkhrmeegp
     1201 vsrtttpvry sge
//
LOCUS       XP_041323483            2176 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-VIIb isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323483
VERSION     XP_041323483.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467549.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2176
                     /product="unconventional myosin-VIIb isoform X1"
                     /calculated_mol_wt=249865
     Region          79..747
                     /region_name="MYSc_Myo7"
                     /note="class VII myosin, motor domain; cd01381"
                     /db_xref="CDD:276832"
     Site            order(106..114,158..165,202..212,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276832"
     Site            106..114
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276832"
     Site            158..165
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276832"
     Site            202..212
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276832"
     Site            437..442
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276832"
     Site            466..489
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276832"
     Site            678..687
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276832"
     Site            order(690..714,716,735..747)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276832"
     Region          784..806
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          1027..1257
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          1261..1359
                     /region_name="FERM1_F1_Myosin-VII"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain 1, F1 sub-domain, found in Myosin-VIIa,
                     Myosin-VIIb, and similar proteins; cd17092"
                     /db_xref="CDD:340612"
     Region          1266..1477
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Site            order(1311..1316,1321,1329,1351)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:340612"
     Region          1471..1569
                     /region_name="FERM_C1_MyoVII"
                     /note="FERM domain C-lobe, repeat 1, of Myosin VII
                     (MyoVII/Myo7); cd13198"
                     /db_xref="CDD:270019"
     Site            order(1471..1472,1476,1478,1493,1508)
                     /site_type="other"
                     /note="CEN1 peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270019"
     Site            order(1481,1503,1505,1512)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270019"
     Site            1556..1567
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270019"
     Region          1570..1631
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(1577,1579,1582,1587,1609..1610,1625,1627..1628)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212814"
     Region          1710..1859
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          1864..1961
                     /region_name="FERM2_F1_Myosin-VII"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain 2, F1 sub-domain, found in Myosin-VIIa,
                     Myosin-VIIb, and similar proteins; cd17093"
                     /db_xref="CDD:340613"
     Region          1867..2078
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          2074..2169
                     /region_name="FERM_C2_MyoVII"
                     /note="FERM domain C-lobe, repeat 2, of Myosin VII
                     (MyoVII, Myo7); cd13199"
                     /db_xref="CDD:270020"
     Site            order(2082,2103,2105,2111)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270020"
     Site            order(2115,2119..2122,2157,2161,2164..2165)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270020"
     Site            2157..2168
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270020"
     CDS             1..2176
                     /gene="MYO7B"
                     /coded_by="XM_041467549.1:1..6531"
                     /db_xref="GeneID:121353602"
ORIGIN      
        1 mvvfrkgdhv wldtqpnsef nvpigavvke sdsgrilled degkehwita rnmhmvhlmh
       61 pssvqgvedm irlgdlheag mvhnllirhq ehkiytytgs ilvavnpyql lplytvdqir
      121 lycnkrigel pphvfaiadn cyfnmkrnkr dqccvisges gagktestkl ilqflaavsg
      181 qhswieqqil eanpileafg naktirndns srfgkyidih fnqsgviega rieqflleks
      241 rvcrqapeer nyhifycmlm gmnteqkkml nlgtaseyty ltmgnctscd srndakdyah
      301 irsamkilmf sdsehwdisk llaailhlgn vefqaavydn ldcsdvidsp hfsiatklle
      361 vdsselqtsl tnlsiivrge svsrplnvvq aangrdafvk giygriflwi vnkinsaifn
      421 pasqkpkdrh qsiglldifg fenfsnnsfe qlcinianeh lqqffvhhvf kleqeeylae
      481 hiawnnidft dnhqalevia lkpmniisli deesrfpkgt datmlikins lhgksnvyip
      541 pksvhdtkfg inhfagvvfy eskdfleknr dtlsanvmqv vhssknkflr eifqvetapp
      601 ilgrgtirhl gsdqvykgld ttkrlstlgg qfkqsleklm kileqcqpyf ircikpndyk
      661 kpllfdrelc ikqlrysgmm etiqirkagy pvrysfeeff eryrfllpws lrqklkndtr
      721 kscisiseav lgkdeswqvg rtkiflkdhh dtvlelqrqn vltdkvlliq kvmrglkdrk
      781 qflkqrrsav aiqsawrgyc crkefrmvll gfgrlqalyr srqlaqqyea trarivgfqa
      841 lcrgfllrqr laeqkkaacv iqayargmla rqtyqrikre nkleprnihl keekhliqvl
      901 gplkgreeks clflclkehl ptqdreeaea rqrrnvlank ptnhdvisdq emvdkifgfl
      961 psmiggqegq aplgfedlet kpskleevdl dmvpmsvele eeahgleeyt fpkfaatyfq
     1021 gssththirr qlrhpllyhd dkdnvlasla vwviilrfmg dlpepamfak sattksssvm
     1081 tqiydtlgrk nqvqlrndsp nmregrrdnk iskgisslkl krsskltgkv teqlrsgeea
     1141 fqedmsisqr pmsnlekvhf iignailrpa irdeiycqic kqltensnrs syargwills
     1201 lclgcfppsd tfvkyllnfi hhgptgyapy caerlrrtys ngarteppsw lelqatkqkk
     1261 pimfnvtlmn gqsitvpads astakeicqf iadktklkdv fgfslyiavf dkvwslgggr
     1321 dhvldaisqc eqlvkergmh erhapwrlyf rkeiftpwhn sredpvstdl iyhqvirgvr
     1381 fgeyrcekee dlveigakyc yiqfgdtihn elvqkvlhdc ipvkqlkskp lekwvslvty
     1441 ahakapytqd hlssqtvkeq lvdfarfqwp llfsrffevt kfsgpslpkn hfiiainwkg
     1501 icfldesekr lleltfpeit gihtnravks fgqsctlitl raeefvltsv nsvviaelvv
     1561 mfleglkkrs qfavamqekk sqedagilsf kkgdllifte dkrldadsgw icaqnertgk
     1621 tgnvflediy iipsltkpss qvlsllmmsp dqrrtasqns fmeepdeedi kvkpytleef
     1681 syehfrtpek esiskavlqk srghsqlwah skeplkqpll kractdpdlr dlacqafiai
     1741 mkfmgdypsk qahssvevtd qifvpaiqee vlrdeiycqi mkqltdnrnr ysetkgwqll
     1801 wlctglfpps ksllkhaqkf ietrqketla pecrrriqtv mrsgcrkwap hpveveailq
     1861 nntkishkic fpneteltfd vgtntkiqtl cqniasklql hswegfslfv kiadkvisqn
     1921 eadyffdslr qvtdwnrrnk pgkdgaalsv ayevyfmrkl wlnvtpgkdl kadtifhyhq
     1981 elpkylrgyh kcskdeavql agliykarfn ndrtqlaaip kilkelvpdn llravtpdew
     2041 kksiiaaysk hegktvdeak iaflkmihrw ptfgsaffev kqasepnfpe ivliainkqg
     2101 vslihqktkd ilvvypfnki snwssgstyf hmtignlvrg trllcetslg ykmddlltsy
     2161 vrllmnavnk qknlpa
//
LOCUS       XP_041323484            2144 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-VIIb isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323484
VERSION     XP_041323484.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467550.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2144
                     /product="unconventional myosin-VIIb isoform X2"
                     /calculated_mol_wt=246177
     Region          79..747
                     /region_name="MYSc_Myo7"
                     /note="class VII myosin, motor domain; cd01381"
                     /db_xref="CDD:276832"
     Site            order(106..114,158..165,202..212,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276832"
     Site            106..114
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276832"
     Site            158..165
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276832"
     Site            202..212
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276832"
     Site            437..442
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276832"
     Site            466..489
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276832"
     Site            678..687
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276832"
     Site            order(690..714,716,735..747)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276832"
     Region          784..806
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          995..1225
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          1229..1327
                     /region_name="FERM1_F1_Myosin-VII"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain 1, F1 sub-domain, found in Myosin-VIIa,
                     Myosin-VIIb, and similar proteins; cd17092"
                     /db_xref="CDD:340612"
     Region          1234..1445
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Site            order(1279..1284,1289,1297,1319)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:340612"
     Region          1439..1537
                     /region_name="FERM_C1_MyoVII"
                     /note="FERM domain C-lobe, repeat 1, of Myosin VII
                     (MyoVII/Myo7); cd13198"
                     /db_xref="CDD:270019"
     Site            order(1439..1440,1444,1446,1461,1476)
                     /site_type="other"
                     /note="CEN1 peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270019"
     Site            order(1449,1471,1473,1480)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270019"
     Site            1524..1535
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270019"
     Region          1538..1599
                     /region_name="SH3"
                     /note="Src Homology 3 domain superfamily; cl17036"
                     /db_xref="CDD:473055"
     Site            order(1545,1547,1550,1555,1577..1578,1593,1595..1596)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212814"
     Region          1678..1827
                     /region_name="MyTH4"
                     /note="Domain in Myosin and Kinesin Tails; smart00139"
                     /db_xref="CDD:214535"
     Region          1832..1929
                     /region_name="FERM2_F1_Myosin-VII"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain 2, F1 sub-domain, found in Myosin-VIIa,
                     Myosin-VIIb, and similar proteins; cd17093"
                     /db_xref="CDD:340613"
     Region          1835..2046
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          2042..2137
                     /region_name="FERM_C2_MyoVII"
                     /note="FERM domain C-lobe, repeat 2, of Myosin VII
                     (MyoVII, Myo7); cd13199"
                     /db_xref="CDD:270020"
     Site            order(2050,2071,2073,2079)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270020"
     Site            order(2083,2087..2090,2125,2129,2132..2133)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270020"
     Site            2125..2136
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270020"
     CDS             1..2144
                     /gene="MYO7B"
                     /coded_by="XM_041467550.1:1..6435"
                     /db_xref="GeneID:121353602"
ORIGIN      
        1 mvvfrkgdhv wldtqpnsef nvpigavvke sdsgrilled degkehwita rnmhmvhlmh
       61 pssvqgvedm irlgdlheag mvhnllirhq ehkiytytgs ilvavnpyql lplytvdqir
      121 lycnkrigel pphvfaiadn cyfnmkrnkr dqccvisges gagktestkl ilqflaavsg
      181 qhswieqqil eanpileafg naktirndns srfgkyidih fnqsgviega rieqflleks
      241 rvcrqapeer nyhifycmlm gmnteqkkml nlgtaseyty ltmgnctscd srndakdyah
      301 irsamkilmf sdsehwdisk llaailhlgn vefqaavydn ldcsdvidsp hfsiatklle
      361 vdsselqtsl tnlsiivrge svsrplnvvq aangrdafvk giygriflwi vnkinsaifn
      421 pasqkpkdrh qsiglldifg fenfsnnsfe qlcinianeh lqqffvhhvf kleqeeylae
      481 hiawnnidft dnhqalevia lkpmniisli deesrfpkgt datmlikins lhgksnvyip
      541 pksvhdtkfg inhfagvvfy eskdfleknr dtlsanvmqv vhssknkflr eifqvetapp
      601 ilgrgtirhl gsdqvykgld ttkrlstlgg qfkqsleklm kileqcqpyf ircikpndyk
      661 kpllfdrelc ikqlrysgmm etiqirkagy pvrysfeeff eryrfllpws lrqklkndtr
      721 kscisiseav lgkdeswqvg rtkiflkdhh dtvlelqrqn vltdkvlliq kvmrglkdrk
      781 qflkqrrsav aiqsawrgyc crkefrmvll gfgrlqalyr srqlaqqyea trarivgfqa
      841 lcrgfllrqr laeqkknkle prnihlkeek hliqvlgplk greekehlpt qdreeaearq
      901 rrnvlankpt nhdvisdqem vdkifgflps miggqegqap lgfedletkp skleevdldm
      961 vpmsveleee ahgleeytfp kfaatyfqgs sththirrql rhpllyhddk dnvlaslavw
     1021 viilrfmgdl pepamfaksa ttksssvmtq iydtlgrknq vqlrndspnm regrrdnkis
     1081 kgisslklkr sskltgkvte qlrsgeeafq edmsisqrpm snlekvhfii gnailrpair
     1141 deiycqickq ltensnrssy argwillslc lgcfppsdtf vkyllnfihh gptgyapyca
     1201 erlrrtysng arteppswle lqatkqkkpi mfnvtlmngq sitvpadsas takeicqfia
     1261 dktklkdvfg fslyiavfdk vwslgggrdh vldaisqceq lvkergmher hapwrlyfrk
     1321 eiftpwhnsr edpvstdliy hqvirgvrfg eyrcekeedl veigakycyi qfgdtihnel
     1381 vqkvlhdcip vkqlkskple kwvslvtyah akapytqdhl ssqtvkeqlv dfarfqwpll
     1441 fsrffevtkf sgpslpknhf iiainwkgic fldesekrll eltfpeitgi htnravksfg
     1501 qsctlitlra eefvltsvns vviaelvvmf leglkkrsqf avamqekksq edagilsfkk
     1561 gdlliftedk rldadsgwic aqnertgktg nvflediyii psltkpssqv lsllmmspdq
     1621 rrtasqnsfm eepdeedikv kpytleefsy ehfrtpekes iskavlqksr ghsqlwahsk
     1681 eplkqpllkr actdpdlrdl acqafiaimk fmgdypskqa hssvevtdqi fvpaiqeevl
     1741 rdeiycqimk qltdnrnrys etkgwqllwl ctglfppsks llkhaqkfie trqketlape
     1801 crrriqtvmr sgcrkwaphp veveailqnn tkishkicfp neteltfdvg tntkiqtlcq
     1861 niasklqlhs wegfslfvki adkvisqnea dyffdslrqv tdwnrrnkpg kdgaalsvay
     1921 evyfmrklwl nvtpgkdlka dtifhyhqel pkylrgyhkc skdeavqlag liykarfnnd
     1981 rtqlaaipki lkelvpdnll ravtpdewkk siiaayskhe gktvdeakia flkmihrwpt
     2041 fgsaffevkq asepnfpeiv liainkqgvs lihqktkdil vvypfnkisn wssgstyfhm
     2101 tignlvrgtr llcetslgyk mddlltsyvr llmnavnkqk nlpa
//
LOCUS       XP_041323485            1216 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol kinase delta [Pyrgilauda ruficollis].
ACCESSION   XP_041323485
VERSION     XP_041323485.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467551.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1216
                     /product="diacylglycerol kinase delta"
                     /calculated_mol_wt=135214
     Region          53..149
                     /region_name="PH_DGK_type2"
                     /note="Type 2 Diacylglycerol kinase Pleckstrin homology
                     (PH) domain; cd13274"
                     /db_xref="CDD:270093"
     Region          138..222
                     /region_name="C1_DGKdelta_rpt1"
                     /note="first protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase delta (DAG kinase
                     delta) and similar proteins; cd20847"
                     /db_xref="CDD:410397"
     Region          229..289
                     /region_name="C1_DGKdelta_rpt2"
                     /note="second protein kinase C conserved region 1 (C1
                     domain) found in diacylglycerol kinase delta (DAG kinase
                     delta) and similar proteins; cd20893"
                     /db_xref="CDD:410443"
     Region          321..443
                     /region_name="DAGKc"
                     /note="Diacylglycerol kinase catalytic domain (presumed);
                     smart00046"
                     /db_xref="CDD:214487"
     Region          765..922
                     /region_name="DAGKa"
                     /note="Diacylglycerol kinase accessory domain (presumed);
                     smart00045"
                     /db_xref="CDD:214486"
     Region          1143..1207
                     /region_name="SAM_DGK-delta"
                     /note="SAM domain of diacylglycerol kinase delta; cd09575"
                     /db_xref="CDD:188974"
     Site            order(1170..1174,1180..1182,1184..1185,1188)
                     /site_type="other"
                     /note="homooligomer interface ML [polypeptide binding]"
                     /db_xref="CDD:188974"
     Site            order(1183,1187,1192..1196,1198..1199,1202)
                     /site_type="other"
                     /note="homooligomer interface EH [polypeptide binding]"
                     /db_xref="CDD:188974"
     CDS             1..1216
                     /gene="DGKD"
                     /coded_by="XM_041467551.1:12..3662"
                     /db_xref="GeneID:121353603"
ORIGIN      
        1 maaagaeqtq pepaagaape essdsepeqe pgslqklirk vstsgqirqk tvikegmlmk
       61 qtssfqrwkr ryfklrgrtl yyaktaksii fdevdltdas vaesstknvn nsftiitpcr
      121 klilcadnrk emedwiaalk tvqnrehfes tqysmdhfsg mhnwyacsha rptycnvcre
      181 alsgvtshgl scevckfkah krcavratnn ckwttlasig kdiiededgi smphqwlegn
      241 lpvsakctvc dktcgsvlrl qdwrclwcka mvhtackdll pnkcplglck vsvipptaln
      301 sidsdgfwka tcppsctspl lvfvnsksgd nqgvkflrrf kqllnpaqvf dlmnggphlg
      361 lrlfqkfdtf rilvcggdgs vgwvlseids lnlhkqcqlg vlplgtgndl arvlgwgsac
      421 dddtqlpqil eklerastkm ldrwsimvye tklprqasts tvtedctens evqkilcyed
      481 svaahlskil tsdqhsvvis sakvlcetvk dfvarvgkay ekatessees evmarkcsvl
      541 kekldsllkt lndesqasss lpnppptiae etedgdgsgs agdssselsv gsactarpqi
      601 frpreqlmlr anslkkairq iiehaekavd eqnaqtqeqe gfllslsase egkelrnedk
      661 ismqsshsss ygvskgrsqr kaskspcerl inkgslslgs saslppqtgs rdnlpmlntk
      721 ilypniragm sgslpgssvi srllihadpf nsepenlecy tekcvmnnyf gigldakisl
      781 dfnnkrdehp ekcrsrtknm mwygvlgtke llhrtyknle qkvllecdgr piplpslqgi
      841 avlnipsyag gtnfwggtke ddtftapsfd dkilevvavf gsmqmavsrv inlqhhriaq
      901 crtvkiailg eegvpvqvdg eawiqppgyi wivhknraqt ltrdrafest lkswedkqkc
      961 elsrpssfsl qpeimseees tqiiqfgqaa galihsirei aqsyqdmeqe lahavnassk
     1021 smdkvyaksk steglncslv vemvnnvkal hnetelllag kmalqldppq keqlqaalad
     1081 mdlqlrklad ipwlwqlmep cdeenqmldy skrsrsgkfr lvtkfkkekn nknkethssm
     1141 glpvhlwgte evaawlehls lceykdifir hdvrgsellh lerrdlkdlg vtkvghmkri
     1201 lhgikelsrs tpasea
//
LOCUS       XP_041323486             702 aa            linear   VRT 06-MAY-2021
DEFINITION  protein IWS1 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323486
VERSION     XP_041323486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..702
                     /product="protein IWS1 homolog isoform X1"
                     /calculated_mol_wt=78967
     Region          <9..349
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <371..675
                     /region_name="TFIIS_I"
                     /note="N-terminal domain (domain I) of transcription
                     elongation factor S-II (TFIIS); similar to a domain found
                     in elongin A and CRSP70; likely to be involved in
                     transcription; domain I from TFIIS interacts with RNA
                     polymerase II holoenzyme; cl00146"
                     /db_xref="CDD:469629"
     CDS             1..702
                     /gene="IWS1"
                     /coded_by="XM_041467552.1:122..2230"
                     /db_xref="GeneID:121353604"
ORIGIN      
        1 mdthyyggeq sddggatpvq derdsgsdve degneqhsgs engsvghhse nehsdgeddg
       61 qvgephmtds enednprqke sdsdneeppn hnvsdsenea thgekdsdsd tedrpnrhls
      121 dseneealnh rvsdsdngep prdhssdfen eeshkqpasd seseelqkqp asdseseelq
      181 kqpasdsese epqkqpasds esedvsrhkq iesedsdged rkekvqndsh hsdnehvrkg
      241 fqgsdsedea pkrrkisdsd edekeeektv krktailsds eddsektpak kvrilsdaee
      301 sdsdaaseks dkrkknvvsd seeeeeegke nagkkkgkdl fgsdsesgne qenliadifg
      361 esgdeeeeef tgfnqedlee ekgdgdmket adesdsddni krgkhmdfms dfdmmlqrkk
      421 smsgkrrrnr dggtfisdad dvvsamivkm neaaeedrql ntqkkpalkk ltllptvvmh
      481 lkkqdlketf idsgvmsaik ewlsplpdrs lpalkireel lkilqelpsv sqetlkhsgi
      541 gravmylykh pkesrpnkdm agklinewsr pifgltsnyk gmtreereqr dleqmphrrk
      601 msssggqtpr rdlekvltge ekalrpgdpg fcararvpmp snkdyvvrpk wnvemessrf
      661 qgtskkgvsr ldkqmrkftd irkksrsaha vkisiegnkm pl
//
LOCUS       XP_041323488             701 aa            linear   VRT 06-MAY-2021
DEFINITION  protein IWS1 homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323488
VERSION     XP_041323488.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467554.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..701
                     /product="protein IWS1 homolog isoform X2"
                     /calculated_mol_wt=79034
     Region          <9..349
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <371..660
                     /region_name="TFIIS_I"
                     /note="N-terminal domain (domain I) of transcription
                     elongation factor S-II (TFIIS); similar to a domain found
                     in elongin A and CRSP70; likely to be involved in
                     transcription; domain I from TFIIS interacts with RNA
                     polymerase II holoenzyme; cl00146"
                     /db_xref="CDD:469629"
     CDS             1..701
                     /gene="IWS1"
                     /coded_by="XM_041467554.1:122..2227"
                     /db_xref="GeneID:121353604"
ORIGIN      
        1 mdthyyggeq sddggatpvq derdsgsdve degneqhsgs engsvghhse nehsdgeddg
       61 qvgephmtds enednprqke sdsdneeppn hnvsdsenea thgekdsdsd tedrpnrhls
      121 dseneealnh rvsdsdngep prdhssdfen eeshkqpasd seseelqkqp asdseseelq
      181 kqpasdsese epqkqpasds esedvsrhkq iesedsdged rkekvqndsh hsdnehvrkg
      241 fqgsdsedea pkrrkisdsd edekeeektv krktailsds eddsektpak kvrilsdaee
      301 sdsdaaseks dkrkknvvsd seeeeeegke nagkkkgkdl fgsdsesgne qenliadifg
      361 esgdeeeeef tgfnqedlee ekgdgdmket adesdsddni krgkhmdfms dfdmmlqrkk
      421 smsgkrrrnr dggtfisdad dvvsamivkm neaaeedrql ntqkkpalkk ltllptvvmh
      481 lkkqdlketf idsgvmsaik ewlsplpdrs lpalkireel lkilqelpsv sqetlkhsgi
      541 gravmylykh pkesrpnkdm agklinewsr pifgltsnyk gmtreereqr dleqmphrrk
      601 msssggqtpr rdlekvltge ekalrpgdpg fcararvpmp snkdyvvrpk wnvemessrp
      661 gtikrgisrl ekhkrrfaeq krlskvhrai kfsiegnrmp l
//
LOCUS       XP_041323489             636 aa            linear   VRT 06-MAY-2021
DEFINITION  protein IWS1 homolog isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323489
VERSION     XP_041323489.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467555.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..636
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..636
                     /product="protein IWS1 homolog isoform X3"
                     /calculated_mol_wt=71989
     Region          <7..287
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <305..609
                     /region_name="TFIIS_I"
                     /note="N-terminal domain (domain I) of transcription
                     elongation factor S-II (TFIIS); similar to a domain found
                     in elongin A and CRSP70; likely to be involved in
                     transcription; domain I from TFIIS interacts with RNA
                     polymerase II holoenzyme; cl00146"
                     /db_xref="CDD:469629"
     CDS             1..636
                     /gene="IWS1"
                     /coded_by="XM_041467555.1:220..2130"
                     /db_xref="GeneID:121353604"
ORIGIN      
        1 mtdsenednp rqkesdsdne eppnhnvsds eneathgekd sdsdtedrpn rhlsdsenee
       61 alnhrvsdsd ngepprdhss dfeneeshkq pasdseseel qkqpasdses eelqkqpasd
      121 seseepqkqp asdsesedvs rhkqieseds dgedrkekvq ndshhsdneh vrkgfqgsds
      181 edeapkrrki sdsdedekee ektvkrktai lsdseddsek tpakkvrils daeesdsdaa
      241 seksdkrkkn vvsdseeeee egkenagkkk gkdlfgsdse sgneqenlia difgesgdee
      301 eeeftgfnqe dleeekgdgd mketadesds ddnikrgkhm dfmsdfdmml qrkksmsgkr
      361 rrnrdggtfi sdaddvvsam ivkmneaaee drqlntqkkp alkkltllpt vvmhlkkqdl
      421 ketfidsgvm saikewlspl pdrslpalki reellkilqe lpsvsqetlk hsgigravmy
      481 lykhpkesrp nkdmagklin ewsrpifglt snykgmtree reqrdleqmp hrrkmsssgg
      541 qtprrdlekv ltgeekalrp gdpgfcarar vpmpsnkdyv vrpkwnveme ssrfqgtskk
      601 gvsrldkqmr kftdirkksr sahavkisie gnkmpl
//
LOCUS       XP_041323490             431 aa            linear   VRT 06-MAY-2021
DEFINITION  vitamin K-dependent protein C [Pyrgilauda ruficollis].
ACCESSION   XP_041323490
VERSION     XP_041323490.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467556.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..431
                     /product="vitamin K-dependent protein C"
                     /calculated_mol_wt=48867
     Region          44..84
                     /region_name="Gla"
                     /note="Vitamin K-dependent
                     carboxylation/gamma-carboxyglutamic (GLA) domain;
                     pfam00594"
                     /db_xref="CDD:459861"
     Region          85..119
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(85,88,101)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          128..165
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          192..422
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(232,277,376)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(370,395,397)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..431
                     /gene="PROC"
                     /coded_by="XM_041467556.1:785..2080"
                     /db_xref="GeneID:121353605"
ORIGIN      
        1 mwklltvgll laacsswgcc tsifysskda nkvlriqkrs ntfleelkpg sverecveel
       61 cdfeeaseif etreatlefw skyvdgdqce hnpcfngick dsigkfccic nkgwegvlcn
      121 yevkysncsm enggcehfcr edpaeqhrlc scasgyrlkd dhttcepvve fpcgrvkldy
      181 ieakadfnir liggtvgrrg gspwqimlqn tkgmflcggv lihpawvlta ahclednegf
      241 rvklgkfhfr peadeqtiwi dkwvihenyt kktsdndiam lhlaehvmyy kyalpiclpt
      301 rnlaeqelmr sgkqvvvtgw gsmsernhtf aaflryieip ivprnecara msshisdnml
      361 cagslgdrkd scrgdsggpm ftrykdtwfl iglvswgegc grrekfgvyt kisqylewiq
      421 hhidtsaplk g
//
LOCUS       XP_041323491             336 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323491
VERSION     XP_041323491.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467557.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 2 isoform X1"
                     /calculated_mol_wt=38438
     Region          10..68
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(10,13,32,35,38,41,59,62)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(12..13,15,37,39..43,53..54,56,61..62,64..68)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          71..122
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(71,74,91,94,97,100,118,121)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          135..185
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(135,138,155,158,161,164,181,184)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          191..244
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(192,196..199)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(193,196,213,216,219,222,240,243)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          252..305
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(252,255,272,275,278,281,300,303)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..336
                     /gene="LIMS2"
                     /coded_by="XM_041467557.1:117..1127"
                     /db_xref="GeneID:121353606"
ORIGIN      
        1 msdalanavc ercqarfdpa erivnsngel yhescfvcaq cfrqfpeglf yefegrkyce
       61 hdfqmlfapc cgecgefitg rvikamnnnw hpecfrcelc dvtladlgfv knagrhlcrp
      121 chnrekakgl gkyicqkchl iideqplmfr ndsyhpdhfn cthcgkelta earelkgely
      181 clpchdkmgi picgacrrpi egrvvnalgk qwhvehfvca kcekpflghr hyekkglayc
      241 ethynqlfgd vcyncshvie gdvvsalnka wcvncfscst cnvkltlknk fvefdmkpvc
      301 kkcyekfple lkkrlkklse laskkihpka ldlnsa
//
LOCUS       XP_041323492             341 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 2
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323492
VERSION     XP_041323492.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467558.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 2 isoform X2"
                     /calculated_mol_wt=38928
     Region          15..73
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(15,18,37,40,43,46,64,67)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(17..18,20,42,44..48,58..59,61,66..67,69..73)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          76..127
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(76,79,96,99,102,105,123,126)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          140..190
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(140,143,160,163,166,169,186,189)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          196..249
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(197,201..204)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(198,201,218,221,224,227,245,248)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          257..310
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(257,260,277,280,283,286,305,308)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..341
                     /gene="LIMS2"
                     /coded_by="XM_041467558.1:143..1168"
                     /db_xref="GeneID:121353606"
ORIGIN      
        1 mtgsnmsdal anavcercqa rfdpaerivn sngelyhesc fvcaqcfrqf peglfyefeg
       61 rkycehdfqm lfapccgecg efitgrvika mnnnwhpecf rcelcdvtla dlgfvknagr
      121 hlcrpchnre kakglgkyic qkchliideq plmfrndsyh pdhfncthcg keltaearel
      181 kgelyclpch dkmgipicga crrpiegrvv nalgkqwhve hfvcakcekp flghrhyekk
      241 glaycethyn qlfgdvcync shviegdvvs alnkawcvnc fscstcnvkl tlknkfvefd
      301 mkpvckkcye kfplelkkrl kklselaskk ihpkaldlns a
//
LOCUS       XP_041323493             336 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323493
VERSION     XP_041323493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467559.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 2 isoform X1"
                     /calculated_mol_wt=38438
     Region          10..68
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(10,13,32,35,38,41,59,62)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(12..13,15,37,39..43,53..54,56,61..62,64..68)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          71..122
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(71,74,91,94,97,100,118,121)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          135..185
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(135,138,155,158,161,164,181,184)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          191..244
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(192,196..199)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(193,196,213,216,219,222,240,243)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          252..305
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(252,255,272,275,278,281,300,303)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..336
                     /gene="LIMS2"
                     /coded_by="XM_041467559.1:150..1160"
                     /db_xref="GeneID:121353606"
ORIGIN      
        1 msdalanavc ercqarfdpa erivnsngel yhescfvcaq cfrqfpeglf yefegrkyce
       61 hdfqmlfapc cgecgefitg rvikamnnnw hpecfrcelc dvtladlgfv knagrhlcrp
      121 chnrekakgl gkyicqkchl iideqplmfr ndsyhpdhfn cthcgkelta earelkgely
      181 clpchdkmgi picgacrrpi egrvvnalgk qwhvehfvca kcekpflghr hyekkglayc
      241 ethynqlfgd vcyncshvie gdvvsalnka wcvncfscst cnvkltlknk fvefdmkpvc
      301 kkcyekfple lkkrlkklse laskkihpka ldlnsa
//
LOCUS       XP_041323494             343 aa            linear   VRT 06-MAY-2021
DEFINITION  uracil nucleotide/cysteinyl leukotriene receptor [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323494
VERSION     XP_041323494.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467560.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520207.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="uracil nucleotide/cysteinyl leukotriene
                     receptor"
                     /calculated_mol_wt=38898
     Region          36..312
                     /region_name="7tmA_GPR17"
                     /note="G protein-coupled receptor 17, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15161"
                     /db_xref="CDD:320289"
     Region          36..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320289"
     Region          70..95
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320289"
     Site            order(91,94..95,108..113,115..116,119,164,166..170,193,
                     196..198,200..202,204..205,252,255..256,258..259,262,
                     279..280,282..284,287,290..291)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320289"
     Region          108..138
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320289"
     Region          150..172
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320289"
     Region          193..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320289"
     Region          232..262
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320289"
     Region          280..305
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320289"
     CDS             1..343
                     /gene="GPR17"
                     /coded_by="XM_041467560.1:1234..2265"
                     /db_xref="GeneID:121353607"
ORIGIN      
        1 mngpaassll lncsnqsnfs letseqcgke thlenmvfat fyfldfilaf agnalalwlf
       61 irdqksgtpa niflmhlava dlffvlvlpi rlvyhfsgnh wpfgeipcrl tgflfylnmy
      121 asiyflmcis vdrflaivhp vksiklrrsr yahltcvflw vivgvamapl llsvqtvqmk
      181 nttvclqlyr ekasrhalvs lavaftfpfv ttvtcyllii qslksgnrve khlkekavkm
      241 iimvlmifli cfvpyhvnry iyilhyngtk ascetqrlla lsnritsclt slngafdpim
      301 yffvaekfre alcnlfcikk titlpqtyeg ktnesslsak sel
//
LOCUS       XP_041323495             374 aa            linear   VRT 06-MAY-2021
DEFINITION  filaggrin-2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323495
VERSION     XP_041323495.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467561.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520219.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>374
                     /product="filaggrin-2-like"
     Region          11..>251
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..374
                     /gene="LOC121353612"
                     /coded_by="XM_041467561.1:122..>1244"
                     /db_xref="GeneID:121353612"
ORIGIN      
        1 maepllrrtw srlrrsgara areapsgggs vqsssrepqn rheepqnhrr epqnrfgapq
       61 nhheepqnhp repqnhrger qepqnrcgep qnpreepqnp sgepqdhhga pqncreepqn
      121 hheepqnrlk dpqnrlkdpq dhheepqnrf gdpqthskdp qnrsgepqnr skdpqnrsge
      181 pqnrskdpqn rsgepqnrsk dpqnrsgepq nrskdpqnrs gepqnrskdp qnrskdpqnr
      241 sgdpqnqcpd paeeeaeaga gggspilggp grppgpgayl qslesssrrw llaakgtgdt
      301 aatratrgat sgdsgdkdrg diwynpiped eddegtggev tppqglgtae grapqeeeee
      361 eeeeeegdgq grag
//
LOCUS       XP_041323496              80 aa            linear   VRT 06-MAY-2021
DEFINITION  serine palmitoyltransferase small subunit B-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323496
VERSION     XP_041323496.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467562.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..80
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..80
                     /product="serine palmitoyltransferase small subunit
                     B-like"
                     /calculated_mol_wt=9181
     Region          8..60
                     /region_name="SPT_ssu-like"
                     /note="Small subunit of serine palmitoyltransferase-like;
                     pfam11779"
                     /db_xref="CDD:463347"
     CDS             1..80
                     /gene="LOC121353613"
                     /coded_by="XM_041467562.1:1..243"
                     /db_xref="GeneID:121353613"
ORIGIN      
        1 mdvkstpsyl ywlfcqfeli tcsylmepwe kvlfysfnlt mlglllytty vclafhassa
       61 fqllcsflgn prenalsvvk
//
LOCUS       XP_041323498             410 aa            linear   VRT 06-MAY-2021
DEFINITION  neuroserpin [Pyrgilauda ruficollis].
ACCESSION   XP_041323498
VERSION     XP_041323498.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467564.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="neuroserpin"
                     /calculated_mol_wt=46156
     Region          23..394
                     /region_name="serpinI1_NSP"
                     /note="serpin family I member 1, neuroserpin; cd02048"
                     /db_xref="CDD:381005"
     Site            348..375
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381005"
     CDS             1..410
                     /gene="SERPINI1"
                     /coded_by="XM_041467564.1:146..1378"
                     /db_xref="GeneID:121353614"
ORIGIN      
        1 myflgllsll alqseafktn ipdetiaels vnvynqlrat redenilfsp lsiaiamgmv
       61 elgahgttlk eirhsmgfds lkngeefafl kelsdmatae eshyvldian slyvqngfhv
      121 sdkflqlvkk yfkaevenvd fsqsaavatq inkwvenhtn smikdfvssr dfgalthlal
      181 inaiyfkgnw ksqfrpentr tfsftkddes evqipmmyqq gefyygefsd gsneaggiyq
      241 vleipyegde ismmivlsrq evplatlepl vkaslinewa nsvkkqkvev ylprftveqe
      301 idlkdvwrgl gitelfsssa dltamsdnke lylakalhka flevneegse aaaasgmiai
      361 srmavlypqv ivdhpffflv rnrrtgtvlf mgrvmhpeam nssghdfekl
//
LOCUS       XP_041323499             212 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323499
VERSION     XP_041323499.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467565.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="programmed cell death protein 10"
                     /calculated_mol_wt=24571
     Region          14..161
                     /region_name="DUF1241"
                     /note="Protein of unknown function (DUF1241); pfam06840"
                     /db_xref="CDD:462018"
     CDS             1..212
                     /gene="PDCD10"
                     /coded_by="XM_041467565.1:258..896"
                     /db_xref="GeneID:121353615"
ORIGIN      
        1 mrmtmeemkn eaettsmvsm plyavmypvf nelervnlsa aqtlraafik aekenpgltq
       61 diimkilekk svdvnftesl lrmaaddvee ymierpepef qdlnekaral kqilskipde
      121 indrvrflqt ikdiasaike lldtvnnvfk kyqyqnrral ehqkkefvky sksfsdtlkt
      181 yfkdgkainv fisanrlihq tnlilqtfkt va
//
LOCUS       XP_041323500             212 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323500
VERSION     XP_041323500.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467566.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="programmed cell death protein 10"
                     /calculated_mol_wt=24571
     Region          14..161
                     /region_name="DUF1241"
                     /note="Protein of unknown function (DUF1241); pfam06840"
                     /db_xref="CDD:462018"
     CDS             1..212
                     /gene="PDCD10"
                     /coded_by="XM_041467566.1:141..779"
                     /db_xref="GeneID:121353615"
ORIGIN      
        1 mrmtmeemkn eaettsmvsm plyavmypvf nelervnlsa aqtlraafik aekenpgltq
       61 diimkilekk svdvnftesl lrmaaddvee ymierpepef qdlnekaral kqilskipde
      121 indrvrflqt ikdiasaike lldtvnnvfk kyqyqnrral ehqkkefvky sksfsdtlkt
      181 yfkdgkainv fisanrlihq tnlilqtfkt va
//
LOCUS       XP_041323501             212 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323501
VERSION     XP_041323501.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467567.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="programmed cell death protein 10"
                     /calculated_mol_wt=24571
     Region          14..161
                     /region_name="DUF1241"
                     /note="Protein of unknown function (DUF1241); pfam06840"
                     /db_xref="CDD:462018"
     CDS             1..212
                     /gene="PDCD10"
                     /coded_by="XM_041467567.1:312..950"
                     /db_xref="GeneID:121353615"
ORIGIN      
        1 mrmtmeemkn eaettsmvsm plyavmypvf nelervnlsa aqtlraafik aekenpgltq
       61 diimkilekk svdvnftesl lrmaaddvee ymierpepef qdlnekaral kqilskipde
      121 indrvrflqt ikdiasaike lldtvnnvfk kyqyqnrral ehqkkefvky sksfsdtlkt
      181 yfkdgkainv fisanrlihq tnlilqtfkt va
//
LOCUS       XP_041323502             212 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323502
VERSION     XP_041323502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="programmed cell death protein 10"
                     /calculated_mol_wt=24571
     Region          14..161
                     /region_name="DUF1241"
                     /note="Protein of unknown function (DUF1241); pfam06840"
                     /db_xref="CDD:462018"
     CDS             1..212
                     /gene="PDCD10"
                     /coded_by="XM_041467568.1:257..895"
                     /db_xref="GeneID:121353615"
ORIGIN      
        1 mrmtmeemkn eaettsmvsm plyavmypvf nelervnlsa aqtlraafik aekenpgltq
       61 diimkilekk svdvnftesl lrmaaddvee ymierpepef qdlnekaral kqilskipde
      121 indrvrflqt ikdiasaike lldtvnnvfk kyqyqnrral ehqkkefvky sksfsdtlkt
      181 yfkdgkainv fisanrlihq tnlilqtfkt va
//
LOCUS       XP_041323503             212 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323503
VERSION     XP_041323503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467569.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="programmed cell death protein 10"
                     /calculated_mol_wt=24571
     Region          14..161
                     /region_name="DUF1241"
                     /note="Protein of unknown function (DUF1241); pfam06840"
                     /db_xref="CDD:462018"
     CDS             1..212
                     /gene="PDCD10"
                     /coded_by="XM_041467569.1:250..888"
                     /db_xref="GeneID:121353615"
ORIGIN      
        1 mrmtmeemkn eaettsmvsm plyavmypvf nelervnlsa aqtlraafik aekenpgltq
       61 diimkilekk svdvnftesl lrmaaddvee ymierpepef qdlnekaral kqilskipde
      121 indrvrflqt ikdiasaike lldtvnnvfk kyqyqnrral ehqkkefvky sksfsdtlkt
      181 yfkdgkainv fisanrlihq tnlilqtfkt va
//
LOCUS       XP_041323504            1057 aa            linear   VRT 06-MAY-2021
DEFINITION  run domain Beclin-1-interacting and cysteine-rich domain-containing
            protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323504
VERSION     XP_041323504.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467570.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1057
                     /product="run domain Beclin-1-interacting and
                     cysteine-rich domain-containing protein isoform X1"
                     /calculated_mol_wt=116343
     Region          25..181
                     /region_name="RUN_RUBCN"
                     /note="RUN domain found in Run domain Beclin-1-interacting
                     and cysteine-rich domain-containing protein (RUBCN) and
                     similar proteins; cd17686"
                     /db_xref="CDD:439048"
     Region          802..979
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..1057
                     /gene="RUBCN"
                     /coded_by="XM_041467570.1:49..3222"
                     /db_xref="GeneID:121353616"
ORIGIN      
        1 meigphagha esrkehwkll gnlkttvegl vsisnpnvws kygglerlcr dmhsilyhgl
       61 ihdkvccrqk dywqfvkdir wlspgsahhl ekfislqesg qrdpegpgdq aiaqlwlqhs
      121 lqchclsaql rpllgnrqyi rkfytdtafl lsdahvtaml qcleaveqnn prllaqidts
      181 mlagtslpsl casdpaagtr dmcdhsaegh ksrvpgalgc ldhftesllt rksdnpspvt
      241 ksqsltalpa spcvpaapyt qqrcfgsfss lqhpassgls drrpmsscgs snssqpqehc
      301 pstrsssfse srspleqpss athlhvpspk dpfspasems ssttsqsedt wtgsqddpqs
      361 dvndgpeyla ignlgrrgra csststsstk ssssklfsss ssqkldsvss lgeqgasggg
      421 srglsllrrs sfsegqssap qgilkkshvr shsdtnvtsg klheshgdps ggrgpvsast
      481 qsselstpss lymeydsgqy lssgegmfrr psegqslisy lseqdfgsca dlekenahfs
      541 isesliaaie lmkcnmmsrq leeeeedsdk eiqelkqkir irrqqirtrh lfptcqelgs
      601 dslvatdsgs qfsshgsmrl sdsgsaedve eyeirdgndg snliqmskng lsvsmaslfs
      661 dadikrnpds srksflssds ishsflnsns aeavamgllk qfegmqlpaa selewlvpeh
      721 dapqkllpip dslpispddg ehadiyklri rvrgnlewap prpqiifnvh laparkvava
      781 kqnyrcagcg irtdpdyikr lryceylgky fcqcchenaq tvipsrilrk wdfskyyvsn
      841 fskdllskiw sdplfnvqai npalyqkvka lnqvrllriq lfhmknmfkt crlakdllds
      901 fdtvpghlte dlhlyslsdf saikkgdlmp hltellkags lhidkcmlcq akgficefcq
      961 neddiifpfe lnkcrtceeg hcpwssctsg cagglpagrs pwlhrnlppw dmvrlltllp
     1021 phaanlsyqg emssfkddmg phsggtrtcl vwsslsa
//
LOCUS       XP_041323505            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  run domain Beclin-1-interacting and cysteine-rich domain-containing
            protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323505
VERSION     XP_041323505.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467571.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="run domain Beclin-1-interacting and
                     cysteine-rich domain-containing protein isoform X2"
                     /calculated_mol_wt=114057
     Region          25..181
                     /region_name="RUN_RUBCN"
                     /note="RUN domain found in Run domain Beclin-1-interacting
                     and cysteine-rich domain-containing protein (RUBCN) and
                     similar proteins; cd17686"
                     /db_xref="CDD:439048"
     Region          802..1002
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..1032
                     /gene="RUBCN"
                     /coded_by="XM_041467571.1:49..3147"
                     /db_xref="GeneID:121353616"
ORIGIN      
        1 meigphagha esrkehwkll gnlkttvegl vsisnpnvws kygglerlcr dmhsilyhgl
       61 ihdkvccrqk dywqfvkdir wlspgsahhl ekfislqesg qrdpegpgdq aiaqlwlqhs
      121 lqchclsaql rpllgnrqyi rkfytdtafl lsdahvtaml qcleaveqnn prllaqidts
      181 mlagtslpsl casdpaagtr dmcdhsaegh ksrvpgalgc ldhftesllt rksdnpspvt
      241 ksqsltalpa spcvpaapyt qqrcfgsfss lqhpassgls drrpmsscgs snssqpqehc
      301 pstrsssfse srspleqpss athlhvpspk dpfspasems ssttsqsedt wtgsqddpqs
      361 dvndgpeyla ignlgrrgra csststsstk ssssklfsss ssqkldsvss lgeqgasggg
      421 srglsllrrs sfsegqssap qgilkkshvr shsdtnvtsg klheshgdps ggrgpvsast
      481 qsselstpss lymeydsgqy lssgegmfrr psegqslisy lseqdfgsca dlekenahfs
      541 isesliaaie lmkcnmmsrq leeeeedsdk eiqelkqkir irrqqirtrh lfptcqelgs
      601 dslvatdsgs qfsshgsmrl sdsgsaedve eyeirdgndg snliqmskng lsvsmaslfs
      661 dadikrnpds srksflssds ishsflnsns aeavamgllk qfegmqlpaa selewlvpeh
      721 dapqkllpip dslpispddg ehadiyklri rvrgnlewap prpqiifnvh laparkvava
      781 kqnyrcagcg irtdpdyikr lryceylgky fcqcchenaq tvipsrilrk wdfskyyvsn
      841 fskdllskiw sdplfnvqai npalyqkvka lnqvrllriq lfhmknmfkt crlakdllds
      901 fdtvpghlte dlhlyslsdf saikkgdlmp hltellkags lhidkcmlcq akgficefcq
      961 neddiifpfe lnkcrtceec kacyhkscfk ssrcprcerl qarralldrq srepcssdce
     1021 deleqpeava at
//
LOCUS       XP_041323506            1007 aa            linear   VRT 06-MAY-2021
DEFINITION  run domain Beclin-1-interacting and cysteine-rich domain-containing
            protein isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323506
VERSION     XP_041323506.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467572.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1007
                     /product="run domain Beclin-1-interacting and
                     cysteine-rich domain-containing protein isoform X3"
                     /calculated_mol_wt=111502
     Region          25..181
                     /region_name="RUN_RUBCN"
                     /note="RUN domain found in Run domain Beclin-1-interacting
                     and cysteine-rich domain-containing protein (RUBCN) and
                     similar proteins; cd17686"
                     /db_xref="CDD:439048"
     Region          <316..665
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          777..977
                     /region_name="zf-RING_9"
                     /note="Putative zinc-RING and/or ribbon; pfam13901"
                     /db_xref="CDD:464030"
     CDS             1..1007
                     /gene="RUBCN"
                     /coded_by="XM_041467572.1:49..3072"
                     /db_xref="GeneID:121353616"
ORIGIN      
        1 meigphagha esrkehwkll gnlkttvegl vsisnpnvws kygglerlcr dmhsilyhgl
       61 ihdkvccrqk dywqfvkdir wlspgsahhl ekfislqesg qrdpegpgdq aiaqlwlqhs
      121 lqchclsaql rpllgnrqyi rkfytdtafl lsdahvtaml qcleaveqnn prllaqidts
      181 mlagtslpsl casdpaagtr dmcdhsaegh ksrvpgalgc ldhftesllt rksdnpspvt
      241 ksqsltalpa spcvpaapyt qqrcfgsfss lqhpassgls drrpmsscgs snssqpqehc
      301 pstrsssfse srspleqpss athlhvpspk dpfspasems ssttsqsedt wtgsqddpqs
      361 dvndgpeyla ignlgrrgra csststsstk ssssklfsss ssqkldsvss lgeqgasggg
      421 srglsllrrs sfsegqssap qgilkkshvr shsdtnvtsg klheshgdps ggrgpvsast
      481 qsselstpss lymeydsgqy lssgegmfrr psegqslisy lseqdfgsca dlekenahfs
      541 isesliaaie lmkcnmmsrq leeeeedsdk eiqelkqkir irrqqirtrh lfptcqelgs
      601 dslvatdsgs qfsshgsmrl sdsgsaedve eyeirdadik rnpdssrksf lssdsishsf
      661 lnsnsaeava mgllkqfegm qlpaaselew lvpehdapqk llpipdslpi spddgehadi
      721 yklrirvrgn lewapprpqi ifnvhlapar kvavakqnyr cagcgirtdp dyikrlryce
      781 ylgkyfcqcc henaqtvips rilrkwdfsk yyvsnfskdl lskiwsdplf nvqainpaly
      841 qkvkalnqvr llriqlfhmk nmfktcrlak dlldsfdtvp ghltedlhly slsdfsaikk
      901 gdlmphltel lkagslhidk cmlcqakgfi cefcqneddi ifpfelnkcr tceeckacyh
      961 kscfkssrcp rcerlqarra lldrqsrepc ssdcedeleq peavaat
//
LOCUS       XP_041323507             558 aa            linear   VRT 06-MAY-2021
DEFINITION  deoxyribodipyrimidine photo-lyase-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323507
VERSION     XP_041323507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..558
                     /product="deoxyribodipyrimidine photo-lyase-like isoform
                     X1"
                     /calculated_mol_wt=63530
     Region          88..552
                     /region_name="phr2"
                     /note="photolyase PhrII; TIGR00591"
                     /db_xref="CDD:129679"
     CDS             1..558
                     /gene="LOC121353618"
                     /coded_by="XM_041467573.1:148..1824"
                     /db_xref="GeneID:121353618"
ORIGIN      
        1 mggepaaspg lcgrtaards qgsagaqcgl fssgsaatll ravlrmrrgq akrkaeaaev
       61 prvsrrrteg eqaiqearrr aapsvrdfky nkkrvrlvsq gsdlkddarc ilywmcrdqr
      121 vqganqlveg apmgdnwafl yaqrlalkqe lplhvcfclv pkfleatirh yrfmlrglqe
      181 vaeecaelni sfhlllgyak dvlptfvteh gvgglvtdfs plrlprqwve dvrerlpedv
      241 pfaqvdahni vpcwvaspkq eysartirgk ihaqlpeflt efppvvrhph ppscpaepia
      301 weacysslqv dhtvkevewa tpgtaagmav lksfiaerlk sfsshrndpn kaalsnlspw
      361 lhfgqvstqr ailevqkhrr nfkdsvdsfv eeavvrrela enfcyyneny dsvqgaydwa
      421 qttlklhakd krpylyslqe leqgtthdpl wnaaqlqmvq egkmhgflrm ywakkilewt
      481 rspeealqfa iylndryeld grdpngyvgc lwsicgihdq gwaerpifgk irymnyagck
      541 rkfdveqfer ryapthsq
//
LOCUS       XP_041323508             546 aa            linear   VRT 06-MAY-2021
DEFINITION  deoxyribodipyrimidine photo-lyase-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323508
VERSION     XP_041323508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..546
                     /product="deoxyribodipyrimidine photo-lyase-like isoform
                     X2"
                     /calculated_mol_wt=62404
     Region          88..540
                     /region_name="phr2"
                     /note="photolyase PhrII; TIGR00591"
                     /db_xref="CDD:129679"
     CDS             1..546
                     /gene="LOC121353618"
                     /coded_by="XM_041467574.1:148..1788"
                     /db_xref="GeneID:121353618"
ORIGIN      
        1 mggepaaspg lcgrtaards qgsagaqcgl fssgsaatll ravlrmrrgq akrkaeaaev
       61 prvsrrrteg eqaiqearrr aapsvrdfky nkkrvrlvsq gsdlkddarc ilywmcrdqr
      121 vqdnwaflya qrlalkqelp lhvcfclvpk fleatirhyr fmlrglqeva eecaelnisf
      181 hlllgyakdv lptfvtehgv gglvtdfspl rlprqwvedv rerlpedvpf aqvdahnivp
      241 cwvaspkqey sartirgkih aqlpefltef ppvvrhphpp scpaepiawe acysslqvdh
      301 tvkevewatp gtaagmavlk sfiaerlksf sshrndpnka alsnlspwlh fgqvstqrai
      361 levqkhrrnf kdsvdsfvee avvrrelaen fcyynenyds vqgaydwaqt tlklhakdkr
      421 pylyslqele qgtthdplwn aaqlqmvqeg kmhgflrmyw akkilewtrs peealqfaiy
      481 lndryeldgr dpngyvgclw sicgihdqgw aerpifgkir ymnyagckrk fdveqferry
      541 apthsq
//
LOCUS       XP_041323509             255 aa            linear   VRT 06-MAY-2021
DEFINITION  flocculation protein FLO11-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323509
VERSION     XP_041323509.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467575.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="flocculation protein FLO11-like isoform X1"
                     /calculated_mol_wt=25979
     CDS             1..255
                     /gene="LOC121353619"
                     /coded_by="XM_041467575.1:473..1240"
                     /db_xref="GeneID:121353619"
ORIGIN      
        1 magqrgglal pllwplllll llsltclavl hlalettamg vtatvspahh tsstpvesst
       61 llptadsttt atllssspet eastpeesst sietgktspp tvlpptttte dsaesteetl
      121 atladttasp vistsdpmsa pssshpartt pdifpstges tpgtessspa tssaqtseat
      181 tlstptdlpt lppvcpsgss ntsashlfls lqlstpldlg nttvqelvla klredlqtaf
      241 pcaglslawr gkrrt
//
LOCUS       XP_041323511             231 aa            linear   VRT 06-MAY-2021
DEFINITION  flocculation protein FLO11-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323511
VERSION     XP_041323511.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467577.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..231
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..231
                     /product="flocculation protein FLO11-like isoform X2"
                     /calculated_mol_wt=23415
     CDS             1..231
                     /gene="LOC121353619"
                     /coded_by="XM_041467577.1:177..872"
                     /db_xref="GeneID:121353619"
ORIGIN      
        1 magtgrpqep ettamgvtat vspahhtsst pvesstllpt adstttatll ssspeteast
       61 peesstsiet gktspptvlp pttttedsae steetlatla dttaspvist sdpmsapsss
      121 hparttpdif pstgestpgt essspatssa qtseattlst ptdlptlppv cpsgssntsa
      181 shlflslqls tpldlgnttv qelvlaklre dlqtafpcag lslawrgkrr t
//
LOCUS       XP_041323512             215 aa            linear   VRT 06-MAY-2021
DEFINITION  putative protein TPRXL isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323512
VERSION     XP_041323512.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467578.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="putative protein TPRXL isoform X3"
                     /calculated_mol_wt=22101
     CDS             1..215
                     /gene="LOC121353619"
                     /coded_by="XM_041467578.1:478..1125"
                     /db_xref="GeneID:121353619"
ORIGIN      
        1 magqrgglal pllwplllll llsltclavl hlalettamg vtatvspahh tsstpvesst
       61 llptadsttt atllssspet eastpeesst sietgktspp tvlpptttte dsaesteetl
      121 atladttasp vistsdpmsa pssshpartt pdifpstges tpgashlfls lqlstpldlg
      181 nttvqelvla klredlqtaf pcaglslawr gkrrt
//
LOCUS       XP_041323513             403 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323513
VERSION     XP_041323513.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467579.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="muscleblind-like protein 1 isoform X1"
                     /calculated_mol_wt=43062
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..403
                     /gene="MBNL1"
                     /coded_by="XM_041467579.1:1069..2280"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppd scslsfpvvq cfpkssknaf gtlpfsvcpa snelgsvpvw
      361 aqapghrvsp svpakprraq svgapsstat eqgqgssvgs elk
//
LOCUS       XP_041323514             389 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323514
VERSION     XP_041323514.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467580.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="muscleblind-like protein 1 isoform X2"
                     /calculated_mol_wt=41747
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..389
                     /gene="MBNL1"
                     /coded_by="XM_041467580.1:1066..2235"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppg silcmtpats vvpmvhgatp atvsaattsa tsvpfaatat
      361 anqslithlv qfcsqtsiyt yipiyvytm
//
LOCUS       XP_041323515             381 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323515
VERSION     XP_041323515.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467581.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="muscleblind-like protein 1 isoform X3"
                     /calculated_mol_wt=40730
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..381
                     /gene="MBNL1"
                     /coded_by="XM_041467581.1:1059..2204"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppg silcmtpats vvpmvhgatp atvsaattsa tsvpfaatat
      361 anqipiisae hltshkyvtq m
//
LOCUS       XP_041323516             377 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323516
VERSION     XP_041323516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="muscleblind-like protein 1 isoform X4"
                     /calculated_mol_wt=40586
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..377
                     /gene="MBNL1"
                     /coded_by="XM_041467582.1:1058..2191"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppv pmvhgatpat vsaattsats vpfaatatan qslithlvqf
      361 csqtsiytyi piyvytm
//
LOCUS       XP_041323517             373 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323517
VERSION     XP_041323517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467583.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="muscleblind-like protein 1 isoform X5"
                     /calculated_mol_wt=39868
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..373
                     /gene="MBNL1"
                     /coded_by="XM_041467583.1:1061..2182"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppg silcmtpats vvpmvhgatp atvsaattsa tsvpfaatat
      361 anqeyesnal prk
//
LOCUS       XP_041323519             369 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323519
VERSION     XP_041323519.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467585.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="muscleblind-like protein 1 isoform X6"
                     /calculated_mol_wt=39569
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..369
                     /gene="MBNL1"
                     /coded_by="XM_041467585.1:1050..2159"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppv pmvhgatpat vsaattsats vpfaatatan qipiisaehl
      361 tshkyvtqm
//
LOCUS       XP_041323520             363 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041323520
VERSION     XP_041323520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="muscleblind-like protein 1 isoform X7"
                     /calculated_mol_wt=38680
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..363
                     /gene="MBNL1"
                     /coded_by="XM_041467586.1:1059..2150"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppg silcmtpats vvpmvhgatp atvsaattsa tsvpfaatat
      361 anq
//
LOCUS       XP_041323521             361 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041323521
VERSION     XP_041323521.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467587.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="muscleblind-like protein 1 isoform X8"
                     /calculated_mol_wt=38707
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..361
                     /gene="MBNL1"
                     /coded_by="XM_041467587.1:1054..2139"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppv pmvhgatpat vsaattsats vpfaatatan qeyesnalpr
      361 k
//
LOCUS       XP_041323522             351 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323522
VERSION     XP_041323522.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467588.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="muscleblind-like protein 1 isoform X9"
                     /calculated_mol_wt=37518
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..351
                     /gene="MBNL1"
                     /coded_by="XM_041467588.1:1051..2106"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppv pmvhgatpat vsaattsats vpfaatatan q
//
LOCUS       XP_041323523             329 aa            linear   VRT 06-MAY-2021
DEFINITION  muscleblind-like protein 1 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323523
VERSION     XP_041323523.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467589.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="muscleblind-like protein 1 isoform X10"
                     /calculated_mol_wt=35650
     Region          180..204
                     /region_name="ZnF_C3H1"
                     /note="zinc finger; smart00356"
                     /db_xref="CDD:214632"
     CDS             1..329
                     /gene="MBNL1"
                     /coded_by="XM_041467589.1:1050..2039"
                     /db_xref="GeneID:121353620"
ORIGIN      
        1 mavsvtpird tkwltlevcr efqrgtcsrp dteckfahps kscqvengrv iacfdslkgr
       61 csrenckylh ppphlktqle ingrnnliqq knmamlaqqm qlanammpga plqpvpmfsv
      121 apslatnasa afnpylgpvs pglvpaeilp tapmlvtgnp gvpvpaaaaa aaqklmrtdr
      181 levcreyqrg ncnrgendcr fahpadsami dtndntvtvc mdyikgrcsr ekckyfhppa
      241 hlqakikaaq yqvnqaaaaq aaataaamgi pqavlpplpk rpalektnga tavfntgifq
      301 yqqalanmql qqhtaflppd thnicrtsd
//
LOCUS       XP_041323524            1364 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF2 and NCK-interacting protein kinase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323524
VERSION     XP_041323524.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467590.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1364
                     /product="TRAF2 and NCK-interacting protein kinase isoform
                     X1"
                     /calculated_mol_wt=155448
     Region          18..313
                     /region_name="STKc_TNIK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Traf2- and Nck-Interacting Kinase; cd06637"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270807"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270807"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270807"
     Region          1046..1344
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1364
                     /gene="TNIK"
                     /coded_by="XM_041467590.1:206..4300"
                     /db_xref="GeneID:121353622"
ORIGIN      
        1 masdsparsl deidlsalrd pagifelvel vgngtygqvy kgrhvktgql aaikvmdvtg
       61 deeeeikqei nmlkkyshhr niatyygafi kknppgmddq lwlvmefcga gsvtdliknt
      121 kgntlkeewi ayicreilrg lshlhqhkvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dfksdlwslg itaiemaega pplcdmhpmr
      241 alfliprnpa prlkskkwsk kfqsfiescl vknhsqrptt eqlmkhpfir dqpnerqvri
      301 qlkdhidrtk kkrgekdete yeysgseeee eendsgepss ilnlpgestl rrdflrlqla
      361 nkersealrr qqleqqqren eehkrqllae rqkrieeqke qrrrleeqqr rekelrkqqe
      421 reqrrhyeeq mrreeerrra eheqeyirrq leeeqrqlei lqqqllqeqa llleykrkql
      481 eeqrqaerlq rqlqqerdyl vslqqqqqqq rqdqrpaekk plyhykegin asekpawake
      541 veersrlnrq sspamphkva nrisdpnlpp rsesfsisgv qpartppllr pvdpqiphlv
      601 tvksqgssls gsqslheqpa kglagfqeal tvtshrtemp rqnsdptsen pplppriekf
      661 drsswlrqee dippkvpqrt tsispalark nspgngsalg prlgsqpira snpdlrrtet
      721 ivesplqrts sgsssssstp ssqpssqggs qpgsqagsse rnrvrgnakp egspvlshep
      781 akvkqednrd vtrpsrpasy kkaidedlta lakelrelri eetnrplkkv tdyssssees
      841 esseeeeedg enethdgtvp vsdiprlipt gipgsnepyn lgmvtthgle tshadtfsni
      901 sregtlmvre tsgekkrsgh aasngfaghi nlpdlvqqsh spagtpteal grvsthaqdm
      961 dsvpeygmgs stkasftpfv dtrvyqtspt dedededees sanplftsel lrqeqaklne
     1021 arkisvvnvn ptnirphsdt peirkykkrf nseilcaalw gvnllvgten glmlldrsgq
     1081 gkvynlinrr rfqqmdvleg lnvlvtisgk knklrvyyls wlrnrilhnd pevekkqgwi
     1141 tvgdlegcih ykvvkyerik flvialknav eiyawapkpy hkfmafksfa dlqhkpllvd
     1201 ltveegqrlk vifgshtgfh vidvdsgnsy diyipshiqg nitphaivil pktdgmemlv
     1261 cyedegvyvn tygritkdvv lqwgemptsv ayihsnqimg wgekaieirs vetghldgvf
     1321 mhkraqrlkf lcerndkvff asvrsggssq vffmtlnrns mmnw
//
LOCUS       XP_041323525            1356 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF2 and NCK-interacting protein kinase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323525
VERSION     XP_041323525.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467591.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1356
                     /product="TRAF2 and NCK-interacting protein kinase isoform
                     X2"
                     /calculated_mol_wt=154513
     Region          18..313
                     /region_name="STKc_TNIK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Traf2- and Nck-Interacting Kinase; cd06637"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270807"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270807"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270807"
     Region          1038..1336
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1356
                     /gene="TNIK"
                     /coded_by="XM_041467591.1:206..4276"
                     /db_xref="GeneID:121353622"
ORIGIN      
        1 masdsparsl deidlsalrd pagifelvel vgngtygqvy kgrhvktgql aaikvmdvtg
       61 deeeeikqei nmlkkyshhr niatyygafi kknppgmddq lwlvmefcga gsvtdliknt
      121 kgntlkeewi ayicreilrg lshlhqhkvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dfksdlwslg itaiemaega pplcdmhpmr
      241 alfliprnpa prlkskkwsk kfqsfiescl vknhsqrptt eqlmkhpfir dqpnerqvri
      301 qlkdhidrtk kkrgekdete yeysgseeee eendsgepss ilnlpgestl rrdflrlqla
      361 nkersealrr qqleqqqren eehkrqllae rqkrieeqke qrrrleeqqr rekelrkqqe
      421 reqrrhyeeq mrreeerrra eheqeyirrq leeeqrqlei lqqqllqeqa llleykrkql
      481 eeqrqaerlq rqlqqerdyl vslqqqqqqq rqdqrpaekk plyhykegin asekpawake
      541 veersrlnrq sspamphkva nrisdpnlpp rsesfsisgv qpartppllr pvdpqiphlv
      601 tvksqgssls gsqslheqpa kglagfqeal tvtshrtemp rqnsdptsen pplppriekf
      661 drsswlrqee dippkvpqrt tsispalark nspgngsalg prlgsqpira snpdlrrtet
      721 ivesplqrts sgsssssstp ssqpssqggs qpgsqagsse rnrvrgnakp egspvlshep
      781 akvkqednrd vtrpsrpadl talakelrel rieetnrplk kvtdysssse esesseeeee
      841 dgenethdgt vpvsdiprli ptgipgsnep ynlgmvtthg letshadtfs nisregtlmv
      901 retsgekkrs ghaasngfag hinlpdlvqq shspagtpte algrvsthaq dmdsvpeygm
      961 gsstkasftp fvdtrvyqts ptdededede essanplfts ellrqeqakl nearkisvvn
     1021 vnptnirphs dtpeirkykk rfnseilcaa lwgvnllvgt englmlldrs gqgkvynlin
     1081 rrrfqqmdvl eglnvlvtis gkknklrvyy lswlrnrilh ndpevekkqg witvgdlegc
     1141 ihykvvkyer ikflvialkn aveiyawapk pyhkfmafks fadlqhkpll vdltveegqr
     1201 lkvifgshtg fhvidvdsgn sydiyipshi qgnitphaiv ilpktdgmem lvcyedegvy
     1261 vntygritkd vvlqwgempt svayihsnqi mgwgekaiei rsvetghldg vfmhkraqrl
     1321 kflcerndkv ffasvrsggs sqvffmtlnr nsmmnw
//
LOCUS       XP_041323527            1335 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF2 and NCK-interacting protein kinase isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323527
VERSION     XP_041323527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467593.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1335
                     /product="TRAF2 and NCK-interacting protein kinase isoform
                     X3"
                     /calculated_mol_wt=151814
     Region          18..313
                     /region_name="STKc_TNIK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Traf2- and Nck-Interacting Kinase; cd06637"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270807"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270807"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270807"
     Region          1017..1315
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1335
                     /gene="TNIK"
                     /coded_by="XM_041467593.1:206..4213"
                     /db_xref="GeneID:121353622"
ORIGIN      
        1 masdsparsl deidlsalrd pagifelvel vgngtygqvy kgrhvktgql aaikvmdvtg
       61 deeeeikqei nmlkkyshhr niatyygafi kknppgmddq lwlvmefcga gsvtdliknt
      121 kgntlkeewi ayicreilrg lshlhqhkvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dfksdlwslg itaiemaega pplcdmhpmr
      241 alfliprnpa prlkskkwsk kfqsfiescl vknhsqrptt eqlmkhpfir dqpnerqvri
      301 qlkdhidrtk kkrgekdete yeysgseeee eendsgepss ilnlpgestl rrdflrlqla
      361 nkersealrr qqleqqqren eehkrqllae rqkrieeqke qrrrleeqqr rekelrkqqe
      421 reqrrhyeeq mrreeerrra eheqeykrkq leeqrqaerl qrqlqqerdy lvslqqqqqq
      481 qrqdqrpaek kplyhykegi nasekpawak eveersrlnr qsspamphkv anrisdpnlp
      541 prsesfsisg vqpartppll rpvdpqiphl vtvksqgssl sgsqslheqp akglagfqea
      601 ltvtshrtem prqnsdptse npplppriek fdrsswlrqe edippkvpqr ttsispalar
      661 knspgngsal gprlgsqpir asnpdlrrte tivesplqrt ssgsssssst pssqpssqgg
      721 sqpgsqagss ernrvrgnak pegspvlshe pakvkqednr dvtrpsrpas ykkaidedlt
      781 alakelrelr ieetnrplkk vtdyssssee sesseeeeed genethdgtv pvsdiprlip
      841 tgipgsnepy nlgmvtthgl etshadtfsn isregtlmvr etsgekkrsg haasngfagh
      901 inlpdlvqqs hspagtptea lgrvsthaqd mdsvpeygmg sstkasftpf vdtrvyqtsp
      961 tdedededee ssanplftse llrqeqakln earkisvvnv nptnirphsd tpeirkykkr
     1021 fnseilcaal wgvnllvgte nglmlldrsg qgkvynlinr rrfqqmdvle glnvlvtisg
     1081 kknklrvyyl swlrnrilhn dpevekkqgw itvgdlegci hykvvkyeri kflvialkna
     1141 veiyawapkp yhkfmafksf adlqhkpllv dltveegqrl kvifgshtgf hvidvdsgns
     1201 ydiyipshiq gnitphaivi lpktdgmeml vcyedegvyv ntygritkdv vlqwgempts
     1261 vayihsnqim gwgekaieir svetghldgv fmhkraqrlk flcerndkvf fasvrsggss
     1321 qvffmtlnrn smmnw
//
LOCUS       XP_041323528            1327 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF2 and NCK-interacting protein kinase isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323528
VERSION     XP_041323528.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467594.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1327
                     /product="TRAF2 and NCK-interacting protein kinase isoform
                     X4"
                     /calculated_mol_wt=150879
     Region          18..313
                     /region_name="STKc_TNIK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Traf2- and Nck-Interacting Kinase; cd06637"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270807"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270807"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270807"
     Region          1009..1307
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1327
                     /gene="TNIK"
                     /coded_by="XM_041467594.1:206..4189"
                     /db_xref="GeneID:121353622"
ORIGIN      
        1 masdsparsl deidlsalrd pagifelvel vgngtygqvy kgrhvktgql aaikvmdvtg
       61 deeeeikqei nmlkkyshhr niatyygafi kknppgmddq lwlvmefcga gsvtdliknt
      121 kgntlkeewi ayicreilrg lshlhqhkvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dfksdlwslg itaiemaega pplcdmhpmr
      241 alfliprnpa prlkskkwsk kfqsfiescl vknhsqrptt eqlmkhpfir dqpnerqvri
      301 qlkdhidrtk kkrgekdete yeysgseeee eendsgepss ilnlpgestl rrdflrlqla
      361 nkersealrr qqleqqqren eehkrqllae rqkrieeqke qrrrleeqqr rekelrkqqe
      421 reqrrhyeeq mrreeerrra eheqeykrkq leeqrqaerl qrqlqqerdy lvslqqqqqq
      481 qrqdqrpaek kplyhykegi nasekpawak eveersrlnr qsspamphkv anrisdpnlp
      541 prsesfsisg vqpartppll rpvdpqiphl vtvksqgssl sgsqslheqp akglagfqea
      601 ltvtshrtem prqnsdptse npplppriek fdrsswlrqe edippkvpqr ttsispalar
      661 knspgngsal gprlgsqpir asnpdlrrte tivesplqrt ssgsssssst pssqpssqgg
      721 sqpgsqagss ernrvrgnak pegspvlshe pakvkqednr dvtrpsrpad ltalakelre
      781 lrieetnrpl kkvtdyssss eesesseeee edgenethdg tvpvsdiprl iptgipgsne
      841 pynlgmvtth gletshadtf snisregtlm vretsgekkr sghaasngfa ghinlpdlvq
      901 qshspagtpt ealgrvstha qdmdsvpeyg mgsstkasft pfvdtrvyqt sptdededed
      961 eessanplft sellrqeqak lnearkisvv nvnptnirph sdtpeirkyk krfnseilca
     1021 alwgvnllvg tenglmlldr sgqgkvynli nrrrfqqmdv leglnvlvti sgkknklrvy
     1081 ylswlrnril hndpevekkq gwitvgdleg cihykvvkye rikflvialk naveiyawap
     1141 kpyhkfmafk sfadlqhkpl lvdltveegq rlkvifgsht gfhvidvdsg nsydiyipsh
     1201 iqgnitphai vilpktdgme mlvcyedegv yvntygritk dvvlqwgemp tsvayihsnq
     1261 imgwgekaie irsvetghld gvfmhkraqr lkflcerndk vffasvrsgg ssqvffmtln
     1321 rnsmmnw
//
LOCUS       XP_041323529            1284 aa            linear   VRT 06-MAY-2021
DEFINITION  TRAF2 and NCK-interacting protein kinase isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323529
VERSION     XP_041323529.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467595.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1284
                     /product="TRAF2 and NCK-interacting protein kinase isoform
                     X5"
                     /calculated_mol_wt=146580
     Region          18..313
                     /region_name="STKc_TNIK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Traf2- and Nck-Interacting Kinase; cd06637"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270807"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270807"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270807"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270807"
     Region          966..1264
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1284
                     /gene="TNIK"
                     /coded_by="XM_041467595.1:206..4060"
                     /db_xref="GeneID:121353622"
ORIGIN      
        1 masdsparsl deidlsalrd pagifelvel vgngtygqvy kgrhvktgql aaikvmdvtg
       61 deeeeikqei nmlkkyshhr niatyygafi kknppgmddq lwlvmefcga gsvtdliknt
      121 kgntlkeewi ayicreilrg lshlhqhkvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dfksdlwslg itaiemaega pplcdmhpmr
      241 alfliprnpa prlkskkwsk kfqsfiescl vknhsqrptt eqlmkhpfir dqpnerqvri
      301 qlkdhidrtk kkrgekdete yeysgseeee eendsgepss ilnlpgestl rrdflrlqla
      361 nkersealrr qqleqqqren eehkrqllae rqkrieeqke qrrrleeqqr rekelrkqqe
      421 reqrrhyeeq mrreeerrra eheqeyirrq leeeqrqlei lqqqllqeqa llleykrkql
      481 eeqrqaerlq rqlqqerdyl vslqqqqqqq rqdqrpaekk plyhykegin asekpawake
      541 veersrlnrq sspamphkva nrisdpnlpp rsesfsisgv qpartppllr pvdpqvpqrt
      601 tsispalark nspgngsalg prlgsqpira snpdlrrtet ivesplqrts sgsssssstp
      661 ssqpssqggs qpgsqagsse rnrvrgnakp egspvlshep akvkqednrd vtrpsrpasy
      721 kkaidedlta lakelrelri eetnrplkkv tdyssssees esseeeeedg enethdgtvp
      781 vsdiprlipt gipgsnepyn lgmvtthgle tshadtfsni sregtlmvre tsgekkrsgh
      841 aasngfaghi nlpdlvqqsh spagtpteal grvsthaqdm dsvpeygmgs stkasftpfv
      901 dtrvyqtspt dedededees sanplftsel lrqeqaklne arkisvvnvn ptnirphsdt
      961 peirkykkrf nseilcaalw gvnllvgten glmlldrsgq gkvynlinrr rfqqmdvleg
     1021 lnvlvtisgk knklrvyyls wlrnrilhnd pevekkqgwi tvgdlegcih ykvvkyerik
     1081 flvialknav eiyawapkpy hkfmafksfa dlqhkpllvd ltveegqrlk vifgshtgfh
     1141 vidvdsgnsy diyipshiqg nitphaivil pktdgmemlv cyedegvyvn tygritkdvv
     1201 lqwgemptsv ayihsnqimg wgekaieirs vetghldgvf mhkraqrlkf lcerndkvff
     1261 asvrsggssq vffmtlnrns mmnw
//
LOCUS       XP_041323530             908 aa            linear   VRT 06-MAY-2021
DEFINITION  26S proteasome non-ATPase regulatory subunit 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323530
VERSION     XP_041323530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..908
                     /product="26S proteasome non-ATPase regulatory subunit 2"
                     /calculated_mol_wt=99856
     Region          21..906
                     /region_name="RPN1"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5110"
                     /db_xref="CDD:227441"
     CDS             1..908
                     /gene="PSMD2"
                     /coded_by="XM_041467596.1:42..2768"
                     /db_xref="GeneID:121353623"
ORIGIN      
        1 mdagggggqs rvqggpgagg dekptppwgr drrdppsgpe keqelseedk qlqdelemlv
       61 erlgekdtsl yrpaleelrr qirssttsmt svpkplkflr phygklkeiy enmapgenkr
      121 faadiisvla mtmsgerecl kyrlvgsqee laswgheyvr hlagevakew qeideadkaq
      181 rdtlltlvke ivpynmahna eheacdllme ieqmdmleky iddnayskvc lyltscvsyv
      241 pepensallr calgifrkfn rypealrlal mlndvelved iftsckdvvv qkqmafmlgr
      301 hgvflelned veeyedltei msnvqlnsnf lalareldim epkvpddiyk thlennrfgg
      361 sgsqvdsarm nlassfvngf vnaafgqdkl ltddgnkwly knkdhgmlsa aaslgtillw
      421 dvdggltqid kylyssedyi ksgallacgi vnsgvknecd palallsdyv lhnsntmrig
      481 aifglglaya gsnredvltl llpvmgdsks smevagvtal acgmisvgsc ngdvtstilq
      541 timeksetel kdtyarwlpl glglnhlgkg eaieailaal evvsepfrsf antlvdicay
      601 agsgnvlkvq qllhicsehf dskekeedkd kkdkkekekk essadmgahq gvavlgiali
      661 amgeeigaem glrtfghllr ygeptlrrav plalalisvs nprlnildtl skfshdadpe
      721 vsynsifamg mvgsgtnnar laamlrqlaq yhakdpnnlf mvrlaqglth lgkgtltlcp
      781 yhsdrqlmsq vavaglltvl vsfldvrnii lgkshyilyg lvaamqprml vtfdeelrpl
      841 pvsvrvgqav dvvgqagkpk titgfqthtt pvllahgera elateehvpv tpilegfvil
      901 rknpnydv
//
LOCUS       XP_041323531             798 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelin-converting enzyme 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323531
VERSION     XP_041323531.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467597.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..798
                     /product="endothelin-converting enzyme 2 isoform X1"
                     /calculated_mol_wt=89652
     Region          119..796
                     /region_name="M13"
                     /note="Peptidase family M13 includes neprilysin and
                     endothelin-converting enzyme I; cd08662"
                     /db_xref="CDD:341056"
     Site            order(148,588,593..596,615,631..632,635..636,639,695,738,
                     741..742,759..760,766)
                     /site_type="active"
                     /db_xref="CDD:341056"
     CDS             1..798
                     /gene="ECE2"
                     /coded_by="XM_041467597.1:4..2400"
                     /db_xref="GeneID:121353625"
ORIGIN      
        1 marmnvalqe lgqampnykr atlqdeegpe pagdgsaspd svevgfrkgp gtllsrlasr
       61 sqlelvlcai avslalllsv aiitlaiqyr rdpshstclt dacvrvaski lealdtemdp
      121 cqdfyqyscg gwikrnplpn grskwstfns iwdqnqaimk hllenatfns sseaerktqr
      181 yylsclkeqr ieelgsqplm elidkiggwn itgswnqtsf mevlksvsgt yratpfftvy
      241 vgadskssns niiqvdqsgl flpsrdyyln ktanervlaa yldymvelgt llggtpeptr
      301 lqmqqvldfe tqlanitvpq aerrddekiy hkmsiaelql lapaidwldy lsyalaplel
      361 adtepvvvyg dtylqqvsdl indtdrsiln nyliwnlvqk tassldqrfe taqerlletl
      421 ygtrksctpr wqtcisntdd tlgfalgslf vkatfdrdsk aiaeemisei raafevsldq
      481 ldwmdektrq aakekvtpgr evdgkphsvh isppvsllgp lpmqadaiyd migfpdfild
      541 nkelddvydg yevsedsffq nmlnfynfsa kvmadqlrkp pnrdqwsmtp qtvnayylpt
      601 kngivfpagi lqapfyarnh pkalnfggig vvmgheltha fddqgreydk egnlrpwwqn
      661 ssleafknrt acmteqygry tihsekvngr qtlgeniadn gglkaaynay kswlqkngee
      721 krlpalgltn hqlffvgfaq vwcsvrtpes sheglvtdph spdkyrvigt lsnsrdfveh
      781 fgcplgspmn pgkhcevw
//
LOCUS       XP_041323532             782 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelin-converting enzyme 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323532
VERSION     XP_041323532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467598.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..782
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..782
                     /product="endothelin-converting enzyme 2 isoform X2"
                     /calculated_mol_wt=87279
     Region          119..707
                     /region_name="M13"
                     /note="Peptidase family M13 includes neprilysin and
                     endothelin-converting enzyme I; cd08662"
                     /db_xref="CDD:341056"
     CDS             1..782
                     /gene="ECE2"
                     /coded_by="XM_041467598.1:4..2352"
                     /db_xref="GeneID:121353625"
ORIGIN      
        1 marmnvalqe lgqampnykr atlqdeegpe pagdgsaspd svevgfrkgp gtllsrlasr
       61 sqlelvlcai avslalllsv aiitlaiqyr rdpshstclt dacvrvaski lealdtemdp
      121 cqdfyqyscg gwikrnplpn grskwstfns iwdqnqaimk hllenatfns sseaerktqr
      181 yylsclkeqr ieelgsqplm elidkiggwn itgswnqtsf mevlksvsgt yratpfftvy
      241 vgadskssns niiqvdqsgl flpsrdyyln ktanervlaa yldymvelgt llggtpeptr
      301 lqmqqvldfe tqlanitvpq aerrddekiy hkmsiaelql lapaidwldy lsyalaplel
      361 adtepvvvyg dtylqqvsdl indtdrsiln nyliwnlvqk tassldqrfe taqerlletl
      421 ygtrksctpr wqtcisntdd tlgfalgslf vkatfdrdsk aiaeemisei raafevsldq
      481 ldwmdektrq aakekvtpgr evdgkphsvh isppvsllgp lpmqadaiyd migfpdfild
      541 nkelddvydg yevsedsffq nmlnfynfsa kvmadqlrkp pnrdqwsmtp qtvnayylpt
      601 kngivfpagi lqapfyarnh pkalnfggig vvmgheltha fddqgreydk egnlrpwwqn
      661 ssleafknrt acmteqygry tihsekvngr qtlgeniadn gglkaaynvs aaiprgyepp
      721 aclslpgasg qlsrrltspg crrtgrrsac qpwgspttsc sswalrrcga psgrpraptk
      781 gw
//
LOCUS       XP_041323533             773 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelin-converting enzyme 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323533
VERSION     XP_041323533.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467599.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..773
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..773
                     /product="endothelin-converting enzyme 2 isoform X3"
                     /calculated_mol_wt=86484
     Region          119..767
                     /region_name="M13"
                     /note="Peptidase family M13 includes neprilysin and
                     endothelin-converting enzyme I; cd08662"
                     /db_xref="CDD:341056"
     Site            order(148,588,593..596,615,631..632,635..636,639,695,738,
                     741..742,762..763)
                     /site_type="active"
                     /db_xref="CDD:341056"
     CDS             1..773
                     /gene="ECE2"
                     /coded_by="XM_041467599.1:4..2325"
                     /db_xref="GeneID:121353625"
ORIGIN      
        1 marmnvalqe lgqampnykr atlqdeegpe pagdgsaspd svevgfrkgp gtllsrlasr
       61 sqlelvlcai avslalllsv aiitlaiqyr rdpshstclt dacvrvaski lealdtemdp
      121 cqdfyqyscg gwikrnplpn grskwstfns iwdqnqaimk hllenatfns sseaerktqr
      181 yylsclkeqr ieelgsqplm elidkiggwn itgswnqtsf mevlksvsgt yratpfftvy
      241 vgadskssns niiqvdqsgl flpsrdyyln ktanervlaa yldymvelgt llggtpeptr
      301 lqmqqvldfe tqlanitvpq aerrddekiy hkmsiaelql lapaidwldy lsyalaplel
      361 adtepvvvyg dtylqqvsdl indtdrsiln nyliwnlvqk tassldqrfe taqerlletl
      421 ygtrksctpr wqtcisntdd tlgfalgslf vkatfdrdsk aiaeemisei raafevsldq
      481 ldwmdektrq aakekvtpgr evdgkphsvh isppvsllgp lpmqadaiyd migfpdfild
      541 nkelddvydg yevsedsffq nmlnfynfsa kvmadqlrkp pnrdqwsmtp qtvnayylpt
      601 kngivfpagi lqapfyarnh pkalnfggig vvmgheltha fddqgreydk egnlrpwwqn
      661 ssleafknrt acmteqygry tihsekvngr qtlgeniadn gglkaaynay kswlqkngee
      721 krlpalgltn hqlffvgfaq vgrskvmgsr aslaarshpa aphpapgvlc php
//
LOCUS       XP_041323534             769 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelin-converting enzyme 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323534
VERSION     XP_041323534.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467600.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="endothelin-converting enzyme 2 isoform X4"
                     /calculated_mol_wt=86624
     Region          119..767
                     /region_name="M13"
                     /note="Peptidase family M13 includes neprilysin and
                     endothelin-converting enzyme I; cd08662"
                     /db_xref="CDD:341056"
     Site            order(148,559,564..567,586,602..603,606..607,610,666,709,
                     712..713,730..731,737)
                     /site_type="active"
                     /db_xref="CDD:341056"
     CDS             1..769
                     /gene="ECE2"
                     /coded_by="XM_041467600.1:4..2313"
                     /db_xref="GeneID:121353625"
ORIGIN      
        1 marmnvalqe lgqampnykr atlqdeegpe pagdgsaspd svevgfrkgp gtllsrlasr
       61 sqlelvlcai avslalllsv aiitlaiqyr rdpshstclt dacvrvaski lealdtemdp
      121 cqdfyqyscg gwikrnplpn grskwstfns iwdqnqaimk hllenatfns sseaerktqr
      181 yylsclkeqr ieelgsqplm elidkiggwn itgswnqtsf mevlksvsgt yratpfftvy
      241 vgadskssns niiqvdqsgl flpsrdyyln ktanervlaa yldymvelgt llggtpeptr
      301 lqmqqvldfe tqlanitvpq aerrddekiy hkmsiaelql lapaidwldy lsyalaplel
      361 adtepvvvyg dtylqqvsdl indtdrsiln nyliwnlvqk tassldqrfe taqerlletl
      421 ygtrksctpr wqtcisntdd tlgfalgslf vkatfdrdsk aiaeemisei raafevsldq
      481 ldwmdektrq aakekadaiy dmigfpdfil dnkelddvyd gyevsedsff qnmlnfynfs
      541 akvmadqlrk ppnrdqwsmt pqtvnayylp tkngivfpag ilqapfyarn hpkalnfggi
      601 gvvmghelth afddqgreyd kegnlrpwwq nssleafknr tacmteqygr ytihsekvng
      661 rqtlgeniad ngglkaayna ykswlqknge ekrlpalglt nhqlffvgfa qvwcsvrtpe
      721 ssheglvtdp hspdkyrvig tlsnsrdfve hfgcplgspm npgkhcevw
//
LOCUS       XP_041323536             389 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial ubiquitin ligase activator of nfkb 1-A-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323536
VERSION     XP_041323536.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467602.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="mitochondrial ubiquitin ligase activator of nfkb
                     1-A-like"
                     /calculated_mol_wt=42324
     Region          159..>270
                     /region_name="GIDE"
                     /note="E3 Ubiquitin ligase; pfam12483"
                     /db_xref="CDD:403620"
     Region          337..387
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(340,343,355,357,361,364,373,376)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..389
                     /gene="LOC121353626"
                     /coded_by="XM_041467602.1:299..1468"
                     /db_xref="GeneID:121353626"
ORIGIN      
        1 mrqsaalgtg iqghpclqnr asgislswvt rphspdnmlt lqalspkpgt mdkpitpgel
       61 lclgsslafs glfyylyrrk srvvariqea pklqvddnlp alvsaaegrc lpyvalegiv
      121 lpaqaalssh yheglqgviq klllkehrli wnslarswse servlseqiy tvpfvlaspg
      181 peaatqvsvd splqavclpl emvyerfqqp shgfrdllgq yligekpkgi leteemlrvg
      241 agltgigels lhpdgslhlq ppaqggeffl clgdwqtvls elesasglwk gaallcaaag
      301 lavllhalcr ayrrsrpkqp qedkeldgee tgerapedsc vvclsrprec vllgcghicc
      361 cfrcfqalpt rlcpicrgpi ervvplyqa
//
LOCUS       XP_041323537             861 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041323537
VERSION     XP_041323537.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467603.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..861
                     /product="ubiquitin carboxyl-terminal hydrolase 13"
                     /calculated_mol_wt=96695
     Region          30..93
                     /region_name="zf-UBP_var"
                     /note="Variant UBP zinc finger; pfam17807"
                     /db_xref="CDD:407678"
     Region          206..278
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          332..856
                     /region_name="Peptidase_C19B"
                     /note="A subfamily of Peptidase C19. Peptidase C19
                     contains ubiquitinyl hydrolases. They are intracellular
                     peptidases that remove ubiquitin molecules from
                     polyubiquinated peptides by cleavage of isopeptide bonds.
                     They hydrolyze bonds involving the carboxyl...; cd02658"
                     /db_xref="CDD:239123"
     Site            order(335,340,821,837)
                     /site_type="active"
                     /db_xref="CDD:239123"
     Region          647..695
                     /region_name="UBA1_UBP13"
                     /note="UBA1 domain found in ubiquitin carboxyl-terminal
                     hydrolase 13 (UBP13); cd14384"
                     /db_xref="CDD:270567"
     Region          723..764
                     /region_name="UBA2_UBP5"
                     /note="UBA2 domain found in ubiquitin carboxyl-terminal
                     hydrolase 5 (UBP5); cd14386"
                     /db_xref="CDD:270569"
     Site            order(748,753..754,757..758,761..762)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270569"
     CDS             1..861
                     /gene="USP13"
                     /coded_by="XM_041467603.1:326..2911"
                     /db_xref="GeneID:121353627"
ORIGIN      
        1 mqraalfrgg daqmaagdlg ellvpympti rvpksgdrvy ktecafsyds pdsegglyvc
       61 mntflgfgre hierhyrktg qcvylhlkrh vrekvpgasg galpkrrnak lfldleissd
      121 lnsddfeyed eaklvifpdh yeislpniee lpalvtiacd allsakspyr kqepdsweee
      181 lqaskhaktl vqldngvrip psgwkcsrcd lrenlwlnlt dgsvlcgkwf fdgsggngha
      241 mehyretgyp lavklgtitp dgadvysfde eepvldphia khlahfgidm lqmqvtengl
      301 rdndikprvs eweviqeagv klkpmygpgy tgmknlgnsc ylnavmqaif sipefqrayv
      361 gnlprifdys pldptqdfnt qmaklghgll sgqyskppmk selieqvmke ehkpqhngis
      421 prmfkafisk ghpefssnrq qdaqefflhl inlvernpvg senpsdvfrf lveertqccq
      481 srkvryterv dyimqlpvam eaatnkdeli ayelkrreae aarrplpelv rakipfsacl
      541 qafsepsnve dfwssalqak sagvktsrfa sfpeylvvqi kkftfgldwi pkkldvsidm
      601 pdfldishlr arglqpgeee lpdiappivi pddpkdhmtn nfvesldide ssvmqlaemg
      661 fpleacrkav yytgnlgaev afnwiiahme epdfaeplvi pafgevassg aaalgavgld
      721 nqppeemvai iismgfqrnl aiqalkatnn nleralewif shpdpeeesd paldtmdmen
      781 nananilaet gsegprikdg pgryelfgfi shmgtstmsg hyvchlrkeg rwviyndlrv
      841 caserppkdl gyiyfyhrip s
//
LOCUS       XP_041323538             956 aa            linear   VRT 06-MAY-2021
DEFINITION  26S proteasome non-ATPase regulatory subunit 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323538
VERSION     XP_041323538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467604.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..956
                     /product="26S proteasome non-ATPase regulatory subunit 1"
                     /calculated_mol_wt=105976
     Region          2..937
                     /region_name="RPN2"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5116"
                     /db_xref="CDD:227446"
     Region          566..591
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          602..625
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..956
                     /gene="PSMD1"
                     /coded_by="XM_041467604.1:145..3015"
                     /db_xref="GeneID:121353628"
ORIGIN      
        1 mitsaagiis lldeeepqlk efalhklnav vndfwaeise svdkievlye degfrsrqfa
       61 alvaskvfyh lgafeeslny algagdlfnv ndnseyveti iakcidhytk qcvenaelpe
      121 gekkpvderl egivnkmfqr clddhkykqa igialetrrl difektiles ndvpgmlays
      181 lklcmslmqn kqfrnkvlrv lvkiymnlek pdfinvcqcl iflddpqavs dileklvkdd
      241 nllmayqicf dlyesasqqf lssviqnlrt vgtpiasvpg stntgtvpgs ekdsdameae
      301 ekpgsscaag rsaeinpepk dqiskmikil sgemaielhl qflirnnntd lmilkntkda
      361 vrnsvchtat viansfmhcg ttsdqflrdn lewlaratnw akftataslg vihkghekea
      421 lqlmatylpk dtspgsayqe ggglyalgli hanhggdiid yllnqlknas ndivrhggsl
      481 glglaamgta rqdvydllkt nlyqddavtg eaaglalglv mlgsknaqai edmvgyaqet
      541 qhekilrgla vgialvmygr meeadalies lcrdkdpilr rsgmytvama ycgsgnnkai
      601 rrllhvavsd vnddvrraav eslgfilfrt peqcpsvvsl lsesynphvr ygaamalgic
      661 cagtgnkeai nllepmtndp vnyvrqgali asalimiqqt eitcpkvsqf rqlyskvind
      721 khddvmakfg ailaqgilda gghnvtislq srtghthmps vvgvlvftqf wfwfplshfl
      781 slaftptcvi glnkdlkmpk vqyksnckps tfayppplev pkekekekvs tavlsitaka
      841 kkkekekeke kkeeekmevd enekkdekek kkepepnfql ldnparvmpa qlkvltmtes
      901 cryqpfkpls iggiiilkdt sedmeelvep vaahgpkiee eeqepeppep feyidd
//
LOCUS       XP_041323539             826 aa            linear   VRT 06-MAY-2021
DEFINITION  lisH domain-containing protein ARMC9 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323539
VERSION     XP_041323539.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467605.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..826
                     /product="lisH domain-containing protein ARMC9 isoform X1"
                     /calculated_mol_wt=93233
     Region          8..38
                     /region_name="LisH"
                     /note="Lissencephaly type-1-like homology motif;
                     smart00667"
                     /db_xref="CDD:128913"
     CDS             1..826
                     /gene="ARMC9"
                     /coded_by="XM_041467605.1:1803..4283"
                     /db_xref="GeneID:121353629"
ORIGIN      
        1 mgdvlayeae llglvkeyld fagfqetvkv fkkeckikgk plpkpanvss edslpvqeem
       61 ltafedgdqk vffqlweehi lssvhdsdpv aqnlefylhi yfatfllkqt mgkpdkaeld
      121 krisyfkayl etkgaalsqt teflpfyalp fvpnpmvhps fkelfqdswt ldlrtrletf
      181 lslalkarqt prlltifkes gqcnkemmqh lhqqlvkreh rymtnlkrlr klqmdyrgll
      241 evtaelvdsl eatvtgkmit peyiqsvcac lfnnhlkqtv thnidftrpg tgyysmspcd
      301 dgyastllra slssmkvqdv pllpsldyek lkkdlitgsd rlkalllqal rwrlttsypg
      361 eqrdtimqay isndlldchs ncqrsvlqll ysksevvrqy marlinafas liegraylsq
      421 nltllqmled rlkaedkdsl twenvlgalq kfslrrtlqs amikdglifw lvdvlidpdc
      481 lsdynleyca allmnlclrs agkkicasip npmlrvlsgl ldhenpkiqs yvngvlysil
      541 aipsvreeak emgmeeilrc fikerneemv rqmefvikql nseepfndsi vsdddeeeey
      601 eeedndilep dldkdevllp qlgelsgekl ltteylgimt htpktkkkqf agvqqsidep
      661 lqrpvtpgyh rtayltpeng tsschdrdek lqspasgpss acggrqssis dfcispssav
      721 emkssevfas ghrmdqhipa gdtlssqsae nftenkgngq shsdfalaft skpkiprtpd
      781 gqsssprkgk vpaiapqfsq sgpqqsshps psgstrsrqs sqsyrk
//
LOCUS       XP_041323540             825 aa            linear   VRT 06-MAY-2021
DEFINITION  lisH domain-containing protein ARMC9 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323540
VERSION     XP_041323540.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467606.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..825
                     /product="lisH domain-containing protein ARMC9 isoform X2"
                     /calculated_mol_wt=93162
     Region          8..38
                     /region_name="LisH"
                     /note="Lissencephaly type-1-like homology motif;
                     smart00667"
                     /db_xref="CDD:128913"
     CDS             1..825
                     /gene="ARMC9"
                     /coded_by="XM_041467606.1:1803..4280"
                     /db_xref="GeneID:121353629"
ORIGIN      
        1 mgdvlayeae llglvkeyld fagfqetvkv fkkeckikgk plpkpanvss edslpvqeem
       61 ltafedgdqk vffqlweehi lssvhdsdpv aqnlefylhi yfatfllkqt mgkpdkaeld
      121 krisyfkayl etkgaalsqt teflpfyalp fvpnpmvhps fkelfqdswt ldlrtrletf
      181 lslalkarqt prlltifkes gqcnkemmqh lhqqlvkreh rymtnlkrlr klqmdyrgll
      241 evtaelvdsl eatvtgkmit peyiqsvcac lfnnhlkqtv thnidftrpg tgyysmspcd
      301 dgyastllra slssmkvqdv pllpsldyek lkkdlitgsd rlkalllqal rwrlttsypg
      361 eqrdtimqay isndlldchs ncqrsvlqll ysksevvrqy marlinafas liegraylsq
      421 nltllqmled rlkaedkdsl twenvlgalq kfslrrtlqs amikdglifw lvdvlidpdc
      481 lsdynleyca allmnlclrs agkkicasip npmlrvlsgl ldhenpkiqs yvngvlysil
      541 aipsvreeak emgmeeilrc fikerneemv rqmefvikql nseepfndsi vsdddeeeey
      601 eeedndilep dldkdevllp qlgelsgekl ltteylgimt htpktkkkqf agvqqsidep
      661 lqrpvtpgyh rtayltpeng tsschdrdek lqspasgpss acggrqssis dfcispssve
      721 mkssevfasg hrmdqhipag dtlssqsaen ftenkgngqs hsdfalafts kpkiprtpdg
      781 qsssprkgkv paiapqfsqs gpqqsshpsp sgstrsrqss qsyrk
//
LOCUS       XP_041323541             463 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 2B [Pyrgilauda ruficollis].
ACCESSION   XP_041323541
VERSION     XP_041323541.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467607.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="5-hydroxytryptamine receptor 2B"
                     /calculated_mol_wt=51527
     Region          41..380
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          43..67
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341347"
     Region          76..98
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341347"
     Region          115..137
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341347"
     Region          160..176
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341347"
     Region          201..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341347"
     Region          305..327
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341347"
     Region          341..366
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341347"
     CDS             1..463
                     /gene="HTR2B"
                     /coded_by="XM_041467607.1:1099..2490"
                     /db_xref="GeneID:121353630"
ORIGIN      
        1 mshplhslng sgagngslsp lsvtgapkqd fpseeqgnkv hwaallilll iiptiggnil
       61 vilavslekk lqyatnyflt slavadllvg lfvmpialli vlfdntwplp talcpiwlfl
      121 dvlfstasim hlcaisldry iaikkpiqas qynswattii kiivvwlisi giaipvpirg
      181 iedgngnstn itcllmpdrf hdfilygsva sffiplaimi vtylltiqvl rkkaylinkp
      241 pqrftwstvs tvfqrdttpa sspekvamln gsrkdqtlss dmpicrasti grksmqtitn
      301 eqraskvlgi vfflfllmwc pffitnissv lcnscneevf qklleifvwi gyvssgvnpl
      361 vytlfnktfr eafsryitcn yrttkpikal rqrssrisfr ssvaensklf vmngmrngin
      421 pimyqspmrl rsspiqassa illdtlllte nevdkteeqv syv
//
LOCUS       XP_041323542             223 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C2orf72 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041323542
VERSION     XP_041323542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..223
                     /product="uncharacterized protein C2orf72 homolog"
                     /calculated_mol_wt=23182
     Region          94..222
                     /region_name="DUF4630"
                     /note="Domain of unknown function (DUF4630); pfam15443"
                     /db_xref="CDD:464720"
     CDS             1..223
                     /gene="CUNH2orf72"
                     /coded_by="XM_041467608.1:1..672"
                     /db_xref="GeneID:121353631"
ORIGIN      
        1 maaadlqelr alveraggrr avvlvaevae gapaapalaa fardllddea praacpgpmp
       61 gcraxxxrdr gartrlrevv rdvcgrlpag pppavvgvll pggdgedaav ldatlrrhfp
      121 apgtvqaary spgspgdcra aacralraal qhpaedmkdr erwrlpsflq ciswnqrswr
      181 kdykakaenn ihedglqdpe eevalaslsp ngnceeaagg tgt
//
LOCUS       XP_041323543             404 aa            linear   VRT 06-MAY-2021
DEFINITION  glycogenin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323543
VERSION     XP_041323543.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467609.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="glycogenin-1 isoform X1"
                     /calculated_mol_wt=44910
     Region          62..313
                     /region_name="GT8_Glycogenin"
                     /note="Glycogenin belongs the GT 8 family and initiates
                     the biosynthesis of glycogen; cd02537"
                     /db_xref="CDD:133018"
     Site            order(140..141,144,158,160..162,183,191..193,221..222,
                     249..250,270,272..273,276)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(160,162,270)
                     /site_type="active"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(182..183,222,240,242..243,247,251)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
     CDS             1..404
                     /gene="GYG1"
                     /coded_by="XM_041467609.1:191..1405"
                     /db_xref="GeneID:121353632"
ORIGIN      
        1 magappaapr gflgegpppa atdepllapp lykgrpqrgp drgcrvsrvs rselrsgtma
       61 dqsfvtlatn dsyvkgalvl gsslqqhrtt rkltalitpq vsdlmrrvle kvfdevilvn
      121 vldsgdsahl almkrpelgi tltklhcwel tqfskcvfmd adtmvlsnid elfereelsa
      181 apdpgwpdcf nsgvfvyrps tetyrqllqf atekgsfdga dqgllntffs swattdmskh
      241 lpfiynlsst svysylpafk afgantkvvh flgstkpwny tydsrtksik gnmddpkivh
      301 peflnmwwdt yiadvlplle qhgivkeitt gvnmlsglvy tlafscgfcr eaevteavsh
      361 vsvspllpte sseerkerwe qgqadymgvd sfdnikkkld tylq
//
LOCUS       XP_041323544             394 aa            linear   VRT 06-MAY-2021
DEFINITION  glycogenin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323544
VERSION     XP_041323544.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467610.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..394
                     /product="glycogenin-1 isoform X2"
                     /calculated_mol_wt=44200
     Region          62..313
                     /region_name="GT8_Glycogenin"
                     /note="Glycogenin belongs the GT 8 family and initiates
                     the biosynthesis of glycogen; cd02537"
                     /db_xref="CDD:133018"
     Site            order(140..141,144,158,160..162,183,191..193,221..222,
                     249..250,270,272..273,276)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(160,162,270)
                     /site_type="active"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(182..183,222,240,242..243,247,251)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
     CDS             1..394
                     /gene="GYG1"
                     /coded_by="XM_041467610.1:191..1375"
                     /db_xref="GeneID:121353632"
ORIGIN      
        1 magappaapr gflgegpppa atdepllapp lykgrpqrgp drgcrvsrvs rselrsgtma
       61 dqsfvtlatn dsyvkgalvl gsslqqhrtt rkltalitpq vsdlmrrvle kvfdevilvn
      121 vldsgdsahl almkrpelgi tltklhcwel tqfskcvfmd adtmvlsnid elfereelsa
      181 apdpgwpdcf nsgvfvyrps tetyrqllqf atekgsfdga dqgllntffs swattdmskh
      241 lpfiynlsst svysylpafk afgantkvvh flgstkpwny tydsrtksik gnmddpkivh
      301 peflnmwwdt yiadvlplle qhgivkeitt gvnmklqrqc ptyqyhhyyq lnlqknakng
      361 gnrakltiwg wiplttsrrn ltptfsrsac lkqw
//
LOCUS       XP_041323545             387 aa            linear   VRT 06-MAY-2021
DEFINITION  glycogenin-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323545
VERSION     XP_041323545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..387
                     /product="glycogenin-1 isoform X3"
                     /calculated_mol_wt=43062
     Region          62..313
                     /region_name="GT8_Glycogenin"
                     /note="Glycogenin belongs the GT 8 family and initiates
                     the biosynthesis of glycogen; cd02537"
                     /db_xref="CDD:133018"
     Site            order(140..141,144,158,160..162,183,191..193,221..222,
                     249..250,270,272..273,276)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(160,162,270)
                     /site_type="active"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(182..183,222,240,242..243,247,251)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
     CDS             1..387
                     /gene="GYG1"
                     /coded_by="XM_041467611.1:191..1354"
                     /db_xref="GeneID:121353632"
ORIGIN      
        1 magappaapr gflgegpppa atdepllapp lykgrpqrgp drgcrvsrvs rselrsgtma
       61 dqsfvtlatn dsyvkgalvl gsslqqhrtt rkltalitpq vsdlmrrvle kvfdevilvn
      121 vldsgdsahl almkrpelgi tltklhcwel tqfskcvfmd adtmvlsnid elfereelsa
      181 apdpgwpdcf nsgvfvyrps tetyrqllqf atekgsfdga dqgllntffs swattdmskh
      241 lpfiynlsst svysylpafk afgantkvvh flgstkpwny tydsrtksik gnmddpkivh
      301 peflnmwwdt yiadvlplle qhgivkeitt gvnmaevtea vshvsvspll ptesseerke
      361 rweqgqadym gvdsfdnikk kldtylq
//
LOCUS       XP_041323546             832 aa            linear   VRT 06-MAY-2021
DEFINITION  ventricular zone-expressed PH domain-containing protein homolog 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323546
VERSION     XP_041323546.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467612.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..832
                     /product="ventricular zone-expressed PH domain-containing
                     protein homolog 1 isoform X1"
                     /calculated_mol_wt=93342
     Region          715..823
                     /region_name="PH_MELT_VEPH1"
                     /note="Melted pleckstrin homology (PH) domain; cd01264"
                     /db_xref="CDD:269965"
     CDS             1..832
                     /gene="VEPH1"
                     /coded_by="XM_041467612.1:1..2499"
                     /db_xref="GeneID:121353634"
ORIGIN      
        1 mhhlfglvla qkdlsragdl fsledaeieg slsealeqir iissaadyqt ndndqavvei
       61 citrittair etasierhgk alvalwescl ehnltpsgkd edaphakias dimscilqny
      121 nqppvmalav pvavkflqrg nkelcrnmss ylslaaiaka ellaehteti vrsvlqgnsm
      181 llrvlpalye kqprpiharl relvapmaql dppeqlhllr llhtvarkre lgvlreclpf
      241 lfehlrdpnh sevilnille issyepaala pflptlreig esfpsligqt akifgavghl
      301 deerartsll ylvnqlanme hsfhhlllle iksltdtfss ilgtqsrdiy rmsnsfsaia
      361 kllarqlgtd gaaparmekd peaecpapld dlksvmngse edeklqvkiq afeekinvdn
      421 stpgsvrrys lgqvskeerk dmrfnrsksl alhtlrvrgl sseggpdeds gdipagisfs
      481 elclsqeqqq vpfgvqpeag lvgtclvshq sadppqagsl pevspekave graeaatgpv
      541 ehqdklylhl kenlgkvkey vmemgrripi peqcviedtv qscvaklffs cplkghycly
      601 skssftlvsq qpplwihimf lfqqsllaep lsiqsssvqv lkalwektql egthsfetam
      661 iqstfphqke lenvqmhlee vrffdlfgys eeagawqcfm cnnpekatgi nqdgqplmeg
      721 klkekqvrwk fikrwktryf tlagnqllfr kgkskddpde rpielskvqs vkvvpkkrrd
      781 rslprafeif tdsrtyvfka kdeknaeqwl qclnvavaqa rqrhgreatt yl
//
LOCUS       XP_041323547             787 aa            linear   VRT 06-MAY-2021
DEFINITION  ventricular zone-expressed PH domain-containing protein homolog 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323547
VERSION     XP_041323547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467613.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..787
                     /product="ventricular zone-expressed PH domain-containing
                     protein homolog 1 isoform X2"
                     /calculated_mol_wt=88333
     Region          670..778
                     /region_name="PH_MELT_VEPH1"
                     /note="Melted pleckstrin homology (PH) domain; cd01264"
                     /db_xref="CDD:269965"
     CDS             1..787
                     /gene="VEPH1"
                     /coded_by="XM_041467613.1:1..2364"
                     /db_xref="GeneID:121353634"
ORIGIN      
        1 mhhlfglvla qkdlsragdl fsledaeieg slsealeqir iissaadyqt ndndqavvei
       61 citrittair etasierhgk alvalwescl ehnltpsgkd edaphakias dimscilqny
      121 nqppvmalav pvavkflqrg nkelcrnmss ylslaaiaka ellaehteti vrsvlqgnsm
      181 llrvlpalye kqprpiharl relvapmaql dppeqlhllr llhtvarkre lgvlreclpf
      241 lfehlrdpnh sevilnille issyepaala pflptlreig esfpsligqt akifgavghl
      301 deerartsll ylvnqlanme hsfhhlllle iksltdtfss ilgtqsrdiy rmsnsfsaia
      361 kllarqlgtd gaaparmekd peaecpapld dlksvmngse edeklqvkiq afeekinvdn
      421 stpgsvrrys lgqvskeerk dmrfnrsksl alhtlrvrgl sseggpdeds gdipagisfs
      481 elclsqeqqq vpfgvqpeag lvgtclvshq sadppqagsl pevspekave graeaatgpv
      541 ehqdklylhl kenlgkvkey vmemgrripi peqcviedtv qscvaklffs cplkghycly
      601 skssftlvsq qpplwihimf lfqqelenvq mhleevrffd lfgyseeaga wqcfmcnnpe
      661 katginqdgq plmegklkek qvrwkfikrw ktryftlagn qllfrkgksk ddpderpiel
      721 skvqsvkvvp kkrrdrslpr afeiftdsrt yvfkakdekn aeqwlqclnv avaqarqrhg
      781 reattyl
//
LOCUS       XP_041323548             741 aa            linear   VRT 06-MAY-2021
DEFINITION  elongation factor G, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041323548
VERSION     XP_041323548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="elongation factor G, mitochondrial"
                     /calculated_mol_wt=82094
     Region          35..725
                     /region_name="FusA"
                     /note="Translation elongation factor EF-G, a GTPase
                     [Translation, ribosomal structure and biogenesis];
                     COG0480"
                     /db_xref="CDD:440248"
     CDS             1..741
                     /gene="GFM1"
                     /coded_by="XM_041467614.1:84..2309"
                     /db_xref="GeneID:121353635"
ORIGIN      
        1 mlgvlragla pgrprhiqll ltscrqcssg vlpnerirni gisahidsgk ttlterilfy
       61 tgriaqmhev kgkdgvgavm dsmelerqrg itiqsaatyt mwkdtninii dtpghvdfti
      121 everslrvld gailvlcavg gvqcqtitvn rqmkrynvpf ltfinkldrm gsnparavqq
      181 lrsklkhnaa fvqipigleg nfkgiidlie ekaiyfdgal gqtlrveeip aelraeaaer
      241 rreliecvan adellgelfl eekvptaaql klairratlq ksftpvlvgs alknkgvqpl
      301 ldavleylpn psevenyall nqgdsqdqtk fllnsardds qpfiglafkl eagkfgqlty
      361 vrvyqgmlkk sdyiyntrtg krvrvqrlvr mhsdnmedvn evyagdical fgidcasgdt
      421 ftdktstdis mesihvpdpv isvamkpsnk ndldkfskgl grftredptf rihfdeeske
      481 tivsgmgelh leiyaqrmer eygcpctmgk pkvafrenis apvpfefthk kqsggagqyg
      541 kvigvleple pedftklefe drtigtnipk qfvpavekgf rdacekglvs ghrisgvrfv
      601 ledgahhmvd sneisfirag egalkqamen aavrilepim avevvapvef qgtviaginr
      661 rhgvitgqdg segyftlyae vplndmfgya telrsctegk geytmeysky qpcsastqee
      721 iinkyleatg rlpakkgkak n
//
LOCUS       XP_041323549             669 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase TIPARP [Pyrgilauda ruficollis].
ACCESSION   XP_041323549
VERSION     XP_041323549.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467615.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..669
                     /product="protein mono-ADP-ribosyltransferase TIPARP"
                     /calculated_mol_wt=75708
     Region          352..414
                     /region_name="WWE"
                     /note="WWE domain; pfam02825"
                     /db_xref="CDD:460715"
     Region          541..660
                     /region_name="TCCD_inducible_PARP_like"
                     /note="Poly(ADP-ribose) polymerases catalyse the covalent
                     attachment of ADP-ribose units from NAD+ to itself and to
                     a limited number of other DNA binding proteins, which
                     decreases their affinity for DNA. Poly(ADP-ribose)
                     polymerase is a regulatory component...; cd01439"
                     /db_xref="CDD:238719"
     Site            order(543..547,550,554,558..560,562,575..577,587,643)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238719"
     CDS             1..669
                     /gene="LOC121353636"
                     /coded_by="XM_041467615.1:307..2316"
                     /db_xref="GeneID:121353636"
ORIGIN      
        1 matepqpacv vpqapcpamk cspaedfspq vrlaekippv kpcfkkkqqv qkrldtqtlr
       61 alrpiftsll gagaldrvfv prgqrgghgd lcepavkktl dlgtscpqte nnvtvlmpta
      121 pdvqgqlpga rpspghpeqd vqsgeqgfsp etpgtaadng hesfqdhplh psagdgaacp
      181 lfpdkvlesy tsgllqengc pmqynltpsn kfsagifqdk seeasldlvf ellnqlqyht
      241 hqedgieicv dflqgtcvyg sdcpkhhtvl pyhwqvrrta tqrwqsvtnd sqehlerlyc
      301 npdndkikvk yggqecwvdl nlmkfyesad fdqmrrlsta scpssssncy tvwkyfcrdh
      361 fgwreysepv vrlieeascr glrevrfitw hnqyilnikd gfqqnscfrr eikrrpllrs
      421 clllmpflqt lggssavpsp csdpaaahdl spaavtspsf ypetwigmdp aqdfiqvpvl
      481 kedksyrtiy nlfhktvpet kykilkilrv qnqflwekyk rkkeymskkm sgldrimner
      541 hlfhgtsqdv vdgickhnfd prvcgkhatm fgqgsyfark asyshnfskr spkgvhfmfl
      601 akvltgrytv gnhtmrrppp vepgsitsdl ydscvdnyfe pqifvifndd qsypyfiiqy
      661 eevsstvsi
//
LOCUS       XP_041323550             669 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase TIPARP [Pyrgilauda ruficollis].
ACCESSION   XP_041323550
VERSION     XP_041323550.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467616.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..669
                     /product="protein mono-ADP-ribosyltransferase TIPARP"
                     /calculated_mol_wt=75708
     Region          352..414
                     /region_name="WWE"
                     /note="WWE domain; pfam02825"
                     /db_xref="CDD:460715"
     Region          541..660
                     /region_name="TCCD_inducible_PARP_like"
                     /note="Poly(ADP-ribose) polymerases catalyse the covalent
                     attachment of ADP-ribose units from NAD+ to itself and to
                     a limited number of other DNA binding proteins, which
                     decreases their affinity for DNA. Poly(ADP-ribose)
                     polymerase is a regulatory component...; cd01439"
                     /db_xref="CDD:238719"
     Site            order(543..547,550,554,558..560,562,575..577,587,643)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238719"
     CDS             1..669
                     /gene="LOC121353636"
                     /coded_by="XM_041467616.1:203..2212"
                     /db_xref="GeneID:121353636"
ORIGIN      
        1 matepqpacv vpqapcpamk cspaedfspq vrlaekippv kpcfkkkqqv qkrldtqtlr
       61 alrpiftsll gagaldrvfv prgqrgghgd lcepavkktl dlgtscpqte nnvtvlmpta
      121 pdvqgqlpga rpspghpeqd vqsgeqgfsp etpgtaadng hesfqdhplh psagdgaacp
      181 lfpdkvlesy tsgllqengc pmqynltpsn kfsagifqdk seeasldlvf ellnqlqyht
      241 hqedgieicv dflqgtcvyg sdcpkhhtvl pyhwqvrrta tqrwqsvtnd sqehlerlyc
      301 npdndkikvk yggqecwvdl nlmkfyesad fdqmrrlsta scpssssncy tvwkyfcrdh
      361 fgwreysepv vrlieeascr glrevrfitw hnqyilnikd gfqqnscfrr eikrrpllrs
      421 clllmpflqt lggssavpsp csdpaaahdl spaavtspsf ypetwigmdp aqdfiqvpvl
      481 kedksyrtiy nlfhktvpet kykilkilrv qnqflwekyk rkkeymskkm sgldrimner
      541 hlfhgtsqdv vdgickhnfd prvcgkhatm fgqgsyfark asyshnfskr spkgvhfmfl
      601 akvltgrytv gnhtmrrppp vepgsitsdl ydscvdnyfe pqifvifndd qsypyfiiqy
      661 eevsstvsi
//
LOCUS       XP_041323551             648 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-, glutamate- and lysine-rich protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323551
VERSION     XP_041323551.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467617.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="leucine-, glutamate- and lysine-rich protein 1"
                     /calculated_mol_wt=74785
     Region          81..>557
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     CDS             1..648
                     /gene="LEKR1"
                     /coded_by="XM_041467617.1:1..1947"
                     /db_xref="GeneID:121353637"
ORIGIN      
        1 merrgpvhal peeirkmprd qtvckycgvs yltlhefkvm edkvkameke ikvykgsler
       61 eqrlqaelqa lhhdlercra eseskterik tltvelktkq eemktvkadl qyfqeekeaa
      121 ykqsqvlrtt lehhcstlnk avslfpfirs eldsikevis tnmesfaamk eeifrqikam
      181 skealteipk lnqrlaksqr eneclqekvk hlsevadtve lktqqlqtsl qqgnelqsrc
      241 relqketldl tnqvetaglq lqkvtaemdh ykklllvkst eldvcqnelk kikyengiae
      301 srltkelkek eesllvcqqv ckhlqeevae kerreedlkr rtgrsesele tlkallgqte
      361 qevlmlkqer ellksrteql qetlrqkvqs edswrdklem dlakgearhk eailkvreea
      421 rvelelerqk qqelitkyqr eheelqqkip glissatksl rmemeilekk lqdaqmkvae
      481 kdgdkekeiq slkrlisele fqltmeksnn esfldklrke ikhksdelek ltqektqlih
      541 slsqvqeens llqdtvrrec eerfeltaal grareqvlel rrlsgtlpag elrlsgalgt
      601 araarapgsg rhggssagsl dapkgraapp geprgrvpag mrhrpsql
//
LOCUS       XP_041323552             520 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323552
VERSION     XP_041323552.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467618.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X1"
                     /calculated_mol_wt=57028
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..520
                     /gene="MFSD1"
                     /coded_by="XM_041467618.1:29..1591"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltggdlnwsa kkraklqkaa aseaeeqerl rrqneddlak
      481 llpkadafsl rnkylsklga qlpahycscf stlahrsvlk
//
LOCUS       XP_041323553             481 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323553
VERSION     XP_041323553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X2"
                     /calculated_mol_wt=52410
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..481
                     /gene="MFSD1"
                     /coded_by="XM_041467619.1:29..1474"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltggdlnwsa kkraklqkaa asdlvcsplr vplfgvpslc
      481 q
//
LOCUS       XP_041323554             480 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323554
VERSION     XP_041323554.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467620.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..480
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X3"
                     /calculated_mol_wt=52310
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..480
                     /gene="MFSD1"
                     /coded_by="XM_041467620.1:29..1471"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltggdlnwsa kkraklqkaa asdsqlitap vsqpwpteac
//
LOCUS       XP_041323555             473 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323555
VERSION     XP_041323555.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467621.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X4"
                     /calculated_mol_wt=51541
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..473
                     /gene="MFSD1"
                     /coded_by="XM_041467621.1:29..1450"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltapssllll flnpgpqkra eiaawpcgka gih
//
LOCUS       XP_041323557             472 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323557
VERSION     XP_041323557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X5"
                     /calculated_mol_wt=51176
     Region          43..389
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..472
                     /gene="MFSD1"
                     /coded_by="XM_041467623.1:30..1448"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtayglk keitavpals qhavhpepgp gsdchsswhd
      421 pghqgipvpg gllqclcllv tdscghavlr esphssqlit apvsqpwpte ac
//
LOCUS       XP_041323558             468 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323558
VERSION     XP_041323558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X6"
                     /calculated_mol_wt=51130
     Region          43..386
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,95..96,98..100,103,123,126..127,
                     130,218,221..222,225..227,230,258,262,310..311,315,319,
                     335,338..339,342..343,346)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..468
                     /gene="MFSD1"
                     /coded_by="XM_041467624.1:30..1436"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrv vfalgalfnt fwlmevgrfi fgiggeslav aqntyavswf kgkelnlvfg
      121 lqlsmarigs tvnmnimgwi ysrvqdllgy tgpstlglal liggvtclfs lscalilayl
      181 drraekllck eqgktgevik ltdvkdfsls lwlifvicvc yyaavfpfig lgkvffiekf
      241 rfssqeasai nsivyiisap mspvfgllvd kvgkniiwvl cavvttlash imlaftfwnp
      301 wiamcllgvs ysllacalwp mvafvvpehq lgtaygfmqs iqnlglavia iaagmildtr
      361 gylflevffs acvclsliav vmlyfvnhlt ggdlnwsakk raklqkaaas eaeeqerlrr
      421 qneddlakll pkadafslrn kylsklgaql pahycscfst lahrsvlk
//
LOCUS       XP_041323559             466 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041323559
VERSION     XP_041323559.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467625.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..466
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X7"
                     /calculated_mol_wt=50859
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..466
                     /gene="MFSD1"
                     /coded_by="XM_041467625.1:28..1428"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltggdlnwsa kkraklqkaa asekes
//
LOCUS       XP_041323560             465 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041323560
VERSION     XP_041323560.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467626.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X8"
                     /calculated_mol_wt=50760
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..465
                     /gene="MFSD1"
                     /coded_by="XM_041467626.1:28..1425"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltggdlnwsa kkraklqkaa asdlf
//
LOCUS       XP_041323561             464 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323561
VERSION     XP_041323561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X9"
                     /calculated_mol_wt=50661
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..464
                     /gene="MFSD1"
                     /coded_by="XM_041467627.1:28..1422"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltggdlnwsa kkraklqkaa asef
//
LOCUS       XP_041323562             463 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323562
VERSION     XP_041323562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X10"
                     /calculated_mol_wt=50514
     Region          43..438
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,394..395,398)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..463
                     /gene="MFSD1"
                     /coded_by="XM_041467628.1:28..1419"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfm qsiqnlglav iaiaagmild trgylflevf
      421 fsacvclsli avvmlyfvnh ltggdlnwsa kkraklqkaa ase
//
LOCUS       XP_041323563             422 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041323563
VERSION     XP_041323563.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467629.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X11"
                     /calculated_mol_wt=46012
     Region          43..398
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(53..54,57..58,61,93,147..148,150..152,155,175,
                     178..179,182,270,273..274,277..279,282,310,314,362..363,
                     367,371,387,390..391,396)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..422
                     /gene="MFSD1"
                     /coded_by="XM_041467629.1:29..1297"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 maeeqrallg adggdggggs pgppralpaa cdprrlphrl lvlalmcflg fgsyfcydnp
       61 aalqtqvqrd mkvntaqfma lyawyswpnv vlcffggfli drvfgirlgt vifssfvcvg
      121 qvvfalgalf ntfwlmevgr fifgiggesl avaqntyavs wfkgkelnlv fglqlsmari
      181 gstvnmnimg wiysrvqdll gytgpstlgl alliggvtcl fslscalila yldrraekll
      241 ckeqgktgev ikltdvkdfs lslwlifvic vcyyaavfpf iglgkvffie kfrfssqeas
      301 ainsivyiis apmspvfgll vdkvgkniiw vlcavvttla shimlaftfw npwiamcllg
      361 vsysllacal wpmvafvvpe hqlgtaygfv tdscghavlr esphssqlit apvsqpwpte
      421 ac
//
LOCUS       XP_041323564             404 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 1 isoform
            X12 [Pyrgilauda ruficollis].
ACCESSION   XP_041323564
VERSION     XP_041323564.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467630.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="major facilitator superfamily domain-containing
                     protein 1 isoform X12"
                     /calculated_mol_wt=44434
     Region          3..322
                     /region_name="MFS_MFSD1"
                     /note="Major facilitator superfamily domain-containing
                     protein 1; cd17340"
                     /db_xref="CDD:340898"
     Site            order(31..32,34..36,39,59,62..63,66,154,157..158,161..163,
                     166,194,198,246..247,251,255,271,274..275,278..279,282)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340898"
     CDS             1..404
                     /gene="MFSD1"
                     /coded_by="XM_041467630.1:223..1437"
                     /db_xref="GeneID:121353639"
ORIGIN      
        1 mdvgrvvfal galfntfwlm evgrfifgig geslavaqnt yavswfkgke lnlvfglqls
       61 marigstvnm nimgwiysrv qdllgytgps tlglalligg vtclfslsca lilayldrra
      121 ekllckeqgk tgevikltdv kdfslslwli fvicvcyyaa vfpfiglgkv ffiekfrfss
      181 qeasainsiv yiisapmspv fgllvdkvgk niiwvlcavv ttlashimla ftfwnpwiam
      241 cllgvsysll acalwpmvaf vvpehqlgta ygfmqsiqnl glaviaiaag mildtrgylf
      301 levffsacvc lsliavvmly fvnhltggdl nwsakkrakl qkaaaseaee qerlrrqned
      361 dlakllpkad afslrnkyls klgaqlpahy cscfstlahr svlk
//
LOCUS       XP_041323566             512 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-L1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323566
VERSION     XP_041323566.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467632.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..512
                     /product="cyclin-L1"
                     /calculated_mol_wt=58144
     Region          25..180
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          184..306
                     /region_name="CYCLIN_CCNL1_rpt2"
                     /note="second cyclin box found in cyclin-L1 (CCNL1) and
                     similar proteins; cd20592"
                     /db_xref="CDD:410295"
     CDS             1..512
                     /gene="CCNL1"
                     /coded_by="XM_041467632.1:72..1610"
                     /db_xref="GeneID:121353641"
ORIGIN      
        1 maaahpgpaa pvapappppp aapgiligdr lysevsltid hslipeerls ptpsmqdgld
       61 lqcetdlril gceliqaagi llrlpqvama tgqvlfhrff ysksfvkhsf eivamacinl
      121 askieeaprr irdvinvfhh lrqlrakrtp splildqnyi ntknqvikae rrvlkelgfc
      181 vhvkhphkii vmylqvlece rnqtlvqtaw nymndslrtn vfvrfqpeti acaciylaar
      241 alqiplptrp hwfllfgtte eeiqeicltt lklytrkkpn yefldkevek rkmalqeakl
      301 kakglnpdgt palstlggfs paskpsspre vkaeekspvs vntktvkkep eerqqtsksp
      361 ynglrkeskr srssrsasrs rsrtksrsrs hsprrhynnr rslsgtyssr srsrsrshsg
      421 sprrhhnhgs phakakhgre elkgssrhgh krkksrsrsq sksrehseaa kkhrherghh
      481 rerrersrsf ershkggkhh gsgrsghgrh rr
//
LOCUS       XP_041323567             512 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-L1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323567
VERSION     XP_041323567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..512
                     /product="cyclin-L1"
                     /calculated_mol_wt=58144
     Region          25..180
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          184..306
                     /region_name="CYCLIN_CCNL1_rpt2"
                     /note="second cyclin box found in cyclin-L1 (CCNL1) and
                     similar proteins; cd20592"
                     /db_xref="CDD:410295"
     CDS             1..512
                     /gene="CCNL1"
                     /coded_by="XM_041467633.1:72..1610"
                     /db_xref="GeneID:121353641"
ORIGIN      
        1 maaahpgpaa pvapappppp aapgiligdr lysevsltid hslipeerls ptpsmqdgld
       61 lqcetdlril gceliqaagi llrlpqvama tgqvlfhrff ysksfvkhsf eivamacinl
      121 askieeaprr irdvinvfhh lrqlrakrtp splildqnyi ntknqvikae rrvlkelgfc
      181 vhvkhphkii vmylqvlece rnqtlvqtaw nymndslrtn vfvrfqpeti acaciylaar
      241 alqiplptrp hwfllfgtte eeiqeicltt lklytrkkpn yefldkevek rkmalqeakl
      301 kakglnpdgt palstlggfs paskpsspre vkaeekspvs vntktvkkep eerqqtsksp
      361 ynglrkeskr srssrsasrs rsrtksrsrs hsprrhynnr rslsgtyssr srsrsrshsg
      421 sprrhhnhgs phakakhgre elkgssrhgh krkksrsrsq sksrehseaa kkhrherghh
      481 rerrersrsf ershkggkhh gsgrsghgrh rr
//
LOCUS       XP_041323568             300 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid leukemia factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323568
VERSION     XP_041323568.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467634.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="myeloid leukemia factor 1 isoform X1"
                     /calculated_mol_wt=33782
     Region          26..235
                     /region_name="Mlf1IP"
                     /note="Myelodysplasia-myeloid leukemia factor
                     1-interacting protein; pfam10248"
                     /db_xref="CDD:463022"
     CDS             1..300
                     /gene="MLF1"
                     /coded_by="XM_041467634.1:110..1012"
                     /db_xref="GeneID:121353642"
ORIGIN      
        1 mfgglgrcfe ddpffrdpfa ahhehmrqmm rnfsdpfgrd pflslpegge rpaerraggr
       61 aqqdsqvatr gtrrmlllfl qatsfslmpf agfgrgwdaq lmdpfsamdr mmsdmrnsml
      121 emhrkfddls iqpeghsfss ssmmtyskvg deppkvfqat aqtrtapggv ketrralkds
      181 esglekiavg hhiqdrahvv kksrnsrtgd eemnqefinm deseagtfde ewqkevmkfr
      241 pcrsreavea srprsvrysp reggsrrekp lgapgsrvpr dslealsvkg tlvplkgsrk
//
LOCUS       XP_041323569             296 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid leukemia factor 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323569
VERSION     XP_041323569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="myeloid leukemia factor 1 isoform X2"
                     /calculated_mol_wt=33171
     Region          22..231
                     /region_name="Mlf1IP"
                     /note="Myelodysplasia-myeloid leukemia factor
                     1-interacting protein; pfam10248"
                     /db_xref="CDD:463022"
     CDS             1..296
                     /gene="MLF1"
                     /coded_by="XM_041467635.1:98..988"
                     /db_xref="GeneID:121353642"
ORIGIN      
        1 meggneagsf vwdpfaahhe hmrqmmrnfs dpfgrdpfls lpeggerpae rraggraqqd
       61 sqvatrgtrr mlllflqats fslmpfagfg rgwdaqlmdp fsamdrmmsd mrnsmlemhr
      121 kfddlsiqpe ghsfssssmm tyskvgdepp kvfqataqtr tapggvketr ralkdsesgl
      181 ekiavghhiq drahvvkksr nsrtgdeemn qefinmdese agtfdeewqk evmkfrpcrs
      241 reaveasrpr svryspregg srrekplgap gsrvprdsle alsvkgtlvp lkgsrk
//
LOCUS       XP_041323570             293 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid leukemia factor 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323570
VERSION     XP_041323570.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467636.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..293
                     /product="myeloid leukemia factor 1 isoform X3"
                     /calculated_mol_wt=32923
     Region          26..228
                     /region_name="Mlf1IP"
                     /note="Myelodysplasia-myeloid leukemia factor
                     1-interacting protein; pfam10248"
                     /db_xref="CDD:463022"
     CDS             1..293
                     /gene="MLF1"
                     /coded_by="XM_041467636.1:109..990"
                     /db_xref="GeneID:121353642"
ORIGIN      
        1 mfgglgrcfe ddpffrdpfa ahhehmrqmm rnfsdpfgrd pflslpegge rpaerraggr
       61 aqqdsqvatr gtrratsfsl mpfagfgrgw daqlmdpfsa mdrmmsdmrn smlemhrkfd
      121 dlsiqpeghs fssssmmtys kvgdeppkvf qataqtrtap ggvketrral kdsesgleki
      181 avghhiqdra hvvkksrnsr tgdeemnqef inmdeseagt fdeewqkevm kfrpcrsrea
      241 veasrprsvr yspreggsrr ekplgapgsr vprdsleals vkgtlvplkg srk
//
LOCUS       XP_041323572             278 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid leukemia factor 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323572
VERSION     XP_041323572.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467638.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..278
                     /product="myeloid leukemia factor 1 isoform X4"
                     /calculated_mol_wt=31395
     Region          26..213
                     /region_name="Mlf1IP"
                     /note="Myelodysplasia-myeloid leukemia factor
                     1-interacting protein; pfam10248"
                     /db_xref="CDD:463022"
     CDS             1..278
                     /gene="MLF1"
                     /coded_by="XM_041467638.1:109..945"
                     /db_xref="GeneID:121353642"
ORIGIN      
        1 mfgglgrcfe ddpffrdpfa ahhehmrqmm rnfsdpfgrd pflslpegge rpaerraggr
       61 aqqdsqvatr gtrrwdaqlm dpfsamdrmm sdmrnsmlem hrkfddlsiq peghsfssss
      121 mmtyskvgde ppkvfqataq trtapggvke trralkdses glekiavghh iqdrahvvkk
      181 srnsrtgdee mnqefinmde seagtfdeew qkevmkfrpc rsreaveasr prsvryspre
      241 ggsrrekplg apgsrvprds lealsvkgtl vplkgsrk
//
LOCUS       XP_041323573             275 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid leukemia factor 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323573
VERSION     XP_041323573.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467639.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="myeloid leukemia factor 1 isoform X5"
                     /calculated_mol_wt=30864
     Region          1..210
                     /region_name="Mlf1IP"
                     /note="Myelodysplasia-myeloid leukemia factor
                     1-interacting protein; pfam10248"
                     /db_xref="CDD:463022"
     CDS             1..275
                     /gene="MLF1"
                     /coded_by="XM_041467639.1:167..994"
                     /db_xref="GeneID:121353642"
ORIGIN      
        1 mrqmmrnfsd pfgrdpflsl peggerpaer raggraqqds qvatrgtrrm lllflqatsf
       61 slmpfagfgr gwdaqlmdpf samdrmmsdm rnsmlemhrk fddlsiqpeg hsfssssmmt
      121 yskvgdeppk vfqataqtrt apggvketrr alkdsesgle kiavghhiqd rahvvkksrn
      181 srtgdeemnq efinmdesea gtfdeewqke vmkfrpcrsr eaveasrprs vryspreggs
      241 rrekplgapg srvprdslea lsvkgtlvpl kgsrk
//
LOCUS       XP_041323574             275 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid leukemia factor 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323574
VERSION     XP_041323574.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467640.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="myeloid leukemia factor 1 isoform X5"
                     /calculated_mol_wt=30864
     Region          1..210
                     /region_name="Mlf1IP"
                     /note="Myelodysplasia-myeloid leukemia factor
                     1-interacting protein; pfam10248"
                     /db_xref="CDD:463022"
     CDS             1..275
                     /gene="MLF1"
                     /coded_by="XM_041467640.1:52..879"
                     /db_xref="GeneID:121353642"
ORIGIN      
        1 mrqmmrnfsd pfgrdpflsl peggerpaer raggraqqds qvatrgtrrm lllflqatsf
       61 slmpfagfgr gwdaqlmdpf samdrmmsdm rnsmlemhrk fddlsiqpeg hsfssssmmt
      121 yskvgdeppk vfqataqtrt apggvketrr alkdsesgle kiavghhiqd rahvvkksrn
      181 srtgdeemnq efinmdesea gtfdeewqke vmkfrpcrsr eaveasrprs vryspreggs
      241 rrekplgapg srvprdslea lsvkgtlvpl kgsrk
//
LOCUS       XP_041323575             275 aa            linear   VRT 06-MAY-2021
DEFINITION  myeloid leukemia factor 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323575
VERSION     XP_041323575.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467641.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="myeloid leukemia factor 1 isoform X5"
                     /calculated_mol_wt=30864
     Region          1..210
                     /region_name="Mlf1IP"
                     /note="Myelodysplasia-myeloid leukemia factor
                     1-interacting protein; pfam10248"
                     /db_xref="CDD:463022"
     CDS             1..275
                     /gene="MLF1"
                     /coded_by="XM_041467641.1:139..966"
                     /db_xref="GeneID:121353642"
ORIGIN      
        1 mrqmmrnfsd pfgrdpflsl peggerpaer raggraqqds qvatrgtrrm lllflqatsf
       61 slmpfagfgr gwdaqlmdpf samdrmmsdm rnsmlemhrk fddlsiqpeg hsfssssmmt
      121 yskvgdeppk vfqataqtrt apggvketrr alkdsesgle kiavghhiqd rahvvkksrn
      181 srtgdeemnq efinmdesea gtfdeewqke vmkfrpcrsr eaveasrprs vryspreggs
      241 rrekplgapg srvprdslea lsvkgtlvpl kgsrk
//
LOCUS       XP_041323577             287 aa            linear   VRT 06-MAY-2021
DEFINITION  short stature homeobox protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323577
VERSION     XP_041323577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467643.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="short stature homeobox protein 2"
                     /calculated_mol_wt=31290
     Region          111..167
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          267..283
                     /region_name="OAR"
                     /note="OAR motif; pfam03826"
                     /db_xref="CDD:461067"
     CDS             1..287
                     /gene="SHOX2"
                     /coded_by="XM_041467643.1:228..1091"
                     /db_xref="GeneID:121353643"
ORIGIN      
        1 meeltafvsk sfdpkakekk elityrevle sgplrgprep ggaaaepgre dtgspaarpa
       61 grspprepda aaeraaeaat pklsdvspel kerkedakam edegqtkikq rrsrtnftle
      121 qlnelerlfd ethypdafmr eelsqrlgls earvqvwfqn rrakcrkqen qlhkgvliga
      181 atqfeacrva pyvnvgalrm pfqqvqaqlq ldsavahahh hlhphlahap ymmfpappfg
      241 lplatlaesa saasvvaaaa aakttsknss iadlrlkakk haaalgl
//
LOCUS       XP_041323578             273 aa            linear   VRT 06-MAY-2021
DEFINITION  ovocalyxin-32-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323578
VERSION     XP_041323578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467644.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="ovocalyxin-32-like"
                     /calculated_mol_wt=29904
     Region          35..244
                     /region_name="Latexin"
                     /note="pfam06907"
                     /db_xref="CDD:462036"
     CDS             1..273
                     /gene="LOC121353644"
                     /coded_by="XM_041467644.1:138..959"
                     /db_xref="GeneID:121353644"
ORIGIN      
        1 mpglralpgl rasapallll valvfargsl avqqlqpgsr saaaaawval qyrnfqagsl
       61 gglralgqvr katlknipes ghkyylqfst edyrtgedag nclatvlypk kksrpvvsik
      121 cshtkdkkei qeedntfyqr lrhqskpita nnipdsygni epalepvwtl avlgsssimw
      181 ekstetleyf laqvksvrqw irkddfvefd ytvllhempt qeiischmrl twlpgqplkv
      241 khfcdseahg adqgsgaesg saagpsaekg asf
//
LOCUS       XP_041323579             251 aa            linear   VRT 06-MAY-2021
DEFINITION  latexin [Pyrgilauda ruficollis].
ACCESSION   XP_041323579
VERSION     XP_041323579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..251
                     /product="latexin"
                     /calculated_mol_wt=27816
     Region          35..243
                     /region_name="Latexin"
                     /note="pfam06907"
                     /db_xref="CDD:462036"
     CDS             1..251
                     /gene="LXN"
                     /coded_by="XM_041467645.1:320..1075"
                     /db_xref="GeneID:121353645"
ORIGIN      
        1 mrcprstrpg spprplgprp alpagggsgs ramelppshf paaraaavav gylrylrggp
       61 grglqlrelr rarhqdiddv ghkyylelel edvldkdrtv nctaevlyhl gsktsapdvq
      121 vtvqgelrst eeadkefynr irslekelva enipdshgnv ppelepihll awvasgyviw
      181 qnstentkfh laqvkhvkqv krsdedlqfd fvvllhdmvs qevlpwevtl lwhpqrgarv
      241 sqsraagags s
//
LOCUS       XP_041323580             187 aa            linear   VRT 06-MAY-2021
DEFINITION  translocon-associated protein subunit gamma [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323580
VERSION     XP_041323580.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467646.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..187
                     /product="translocon-associated protein subunit gamma"
                     /calculated_mol_wt=21086
     Region          14..185
                     /region_name="TRAP-gamma"
                     /note="Translocon-associated protein, gamma subunit
                     (TRAP-gamma); pfam07074"
                     /db_xref="CDD:399809"
     CDS             1..187
                     /gene="SSR3"
                     /coded_by="XM_041467646.1:114..677"
                     /db_xref="GeneID:121353646"
ORIGIN      
        1 mapkggpggr qqseedlllq dfsrnlsaks salffgnafi vsaipiwlyw riwhmdlvqs
       61 avlysvmtli stylvafayk nvkfvlkhkv aqkredavsk evtrklsead nrkmsrkekd
      121 erilwkknev adyeattfsi fynntlflvl viiasffvlk nfnptvnyil sisassglia
      181 llstgsk
//
LOCUS       XP_041323581              81 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-gated potassium channel subunit beta-1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323581
VERSION     XP_041323581.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467647.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..81
                     /product="voltage-gated potassium channel subunit
                     beta-1-like"
                     /calculated_mol_wt=8628
     CDS             1..81
                     /gene="LOC121353647"
                     /coded_by="XM_041467647.1:308..553"
                     /db_xref="GeneID:121353647"
ORIGIN      
        1 mhlykaacad mprpraggrr agetprarsa apgwprprsp rsqgkqlerf lqlhglgtsd
       61 sarqsgtmsy sgllpaledl a
//
LOCUS       XP_041323583             740 aa            linear   VRT 06-MAY-2021
DEFINITION  mitofusin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323583
VERSION     XP_041323583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..740
                     /product="mitofusin-1"
                     /calculated_mol_wt=84040
     Region          77..329
                     /region_name="DLP_2"
                     /note="Dynamin-like protein including dynamins,
                     mitofusins, and guanylate-binding proteins; cd09912"
                     /db_xref="CDD:206739"
     Site            83..90
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206739"
     Site            order(85..91,182,238..239,241,285..287)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206739"
     Site            110
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206739"
     Site            112..114
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206739"
     Site            179..182
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206739"
     Site            order(181..182,201..202)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206739"
     Site            238..241
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206739"
     Site            285..287
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206739"
     Region          <374..451
                     /region_name="GvpP"
                     /note="Gas vesicle protein YhaH [General function
                     prediction only]; COG4980"
                     /db_xref="CDD:444004"
     Region          579..737
                     /region_name="Fzo_mitofusin"
                     /note="fzo-like conserved region; pfam04799"
                     /db_xref="CDD:461432"
     CDS             1..740
                     /gene="MFN1"
                     /coded_by="XM_041467649.1:166..2388"
                     /db_xref="GeneID:121353650"
ORIGIN      
        1 maeasvsplk hfvlakktit aifdqlleyv tegaafveat yknpeldhia tedelakiqa
       61 yknklavige vlsrrhmkva ffgrtssgks svinamlwdk vlpsgightt ncflsvegtd
      121 gdkaylmteg sdekksvktv nqlahalhmd kdlkagclvh vfwpkskcal lrddlvivds
      181 pgtdvtteld swidkfclda dvfvlvanse stlmntekhf fhkvnerlsk pnifilnnrw
      241 dasasepeym edvrrqhmer cltflvdelk vidpvearnr iffvsakevl sarrqkaqgm
      301 pesggalaeg fqtrfqefqh feqifeecis qsavktkfeq htirakqiid tvknimdtin
      361 vaaaekrvhs meeredqkdr ldfvrnqlni ltedtkekik rvteeveskv ssamtdeicr
      421 lsvlvdefys dfhpspqvlk lykaelnkhi edglgknlae rcssevnqsm hqsqqemien
      481 lkpllpssvq dqlhllipcr kfdlsydlnc hslcadfqed imfhfslgwt slvnrflgpk
      541 qaqkvllgla dpnlhiprpl astpsaaslp aitpenmpqd efmvplvlsl asltsrtsms
      601 iiivggvvwk tvgwklisls lsmygllyly erltwttrak erafkqqfvn yateklqmiv
      661 sltsancshq vqqemattfa rlcqqvdite knlekeiarl skeidqlehi qstskqlrnk
      721 aihleneldr ftkhflqksk
//
LOCUS       XP_041323584             740 aa            linear   VRT 06-MAY-2021
DEFINITION  mitofusin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323584
VERSION     XP_041323584.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467650.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..740
                     /product="mitofusin-1"
                     /calculated_mol_wt=84040
     Region          77..329
                     /region_name="DLP_2"
                     /note="Dynamin-like protein including dynamins,
                     mitofusins, and guanylate-binding proteins; cd09912"
                     /db_xref="CDD:206739"
     Site            83..90
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206739"
     Site            order(85..91,182,238..239,241,285..287)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206739"
     Site            110
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206739"
     Site            112..114
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206739"
     Site            179..182
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206739"
     Site            order(181..182,201..202)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206739"
     Site            238..241
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206739"
     Site            285..287
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206739"
     Region          <374..451
                     /region_name="GvpP"
                     /note="Gas vesicle protein YhaH [General function
                     prediction only]; COG4980"
                     /db_xref="CDD:444004"
     Region          579..737
                     /region_name="Fzo_mitofusin"
                     /note="fzo-like conserved region; pfam04799"
                     /db_xref="CDD:461432"
     CDS             1..740
                     /gene="MFN1"
                     /coded_by="XM_041467650.1:728..2950"
                     /db_xref="GeneID:121353650"
ORIGIN      
        1 maeasvsplk hfvlakktit aifdqlleyv tegaafveat yknpeldhia tedelakiqa
       61 yknklavige vlsrrhmkva ffgrtssgks svinamlwdk vlpsgightt ncflsvegtd
      121 gdkaylmteg sdekksvktv nqlahalhmd kdlkagclvh vfwpkskcal lrddlvivds
      181 pgtdvtteld swidkfclda dvfvlvanse stlmntekhf fhkvnerlsk pnifilnnrw
      241 dasasepeym edvrrqhmer cltflvdelk vidpvearnr iffvsakevl sarrqkaqgm
      301 pesggalaeg fqtrfqefqh feqifeecis qsavktkfeq htirakqiid tvknimdtin
      361 vaaaekrvhs meeredqkdr ldfvrnqlni ltedtkekik rvteeveskv ssamtdeicr
      421 lsvlvdefys dfhpspqvlk lykaelnkhi edglgknlae rcssevnqsm hqsqqemien
      481 lkpllpssvq dqlhllipcr kfdlsydlnc hslcadfqed imfhfslgwt slvnrflgpk
      541 qaqkvllgla dpnlhiprpl astpsaaslp aitpenmpqd efmvplvlsl asltsrtsms
      601 iiivggvvwk tvgwklisls lsmygllyly erltwttrak erafkqqfvn yateklqmiv
      661 sltsancshq vqqemattfa rlcqqvdite knlekeiarl skeidqlehi qstskqlrnk
      721 aihleneldr ftkhflqksk
//
LOCUS       XP_041323585             492 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 639 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323585
VERSION     XP_041323585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="zinc finger protein 639 isoform X1"
                     /calculated_mol_wt=56673
     Region          242..262
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(247,249,251,253..254,257..258,261,274,276,280..281,
                     284..285,289,303,305,307,309..310,313..314)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          269..290
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          298..314
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          383..404
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          412..432
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(417,419,421,423..424,427..428,431,445,447,451..452,
                     455..456,474,476,478,480..481,484..485,488)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          440..461
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          469..489
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..492
                     /gene="ZNF639"
                     /coded_by="XM_041467651.1:1..1479"
                     /db_xref="GeneID:121353651"
ORIGIN      
        1 mlllysscrl fkmnehpkkr krktlhpsry sdssgasryi dnsgifsdhc ysvcsmrqpd
       61 inrgrfhspv qsldtdddgs pvhagsshws gahsnvgmhc tdpkkkdkgk drgtnngmcr
      121 dlcdspifsd spteeekpld iqtveistte vnavevhdie tqtvspekle aedleeiple
      181 tckifeknha lnitaqqkwp llranssgly kcelcefnsk yfsdlkqhmi lkhktctdth
      241 vckvckesfs skvqliehvk lheedpyick ycdyktvife nlsqhiadth fndhlywceq
      301 cdvqfsssse lylhfqehsc deqylcqfce hetndpedlh shvvnehacr lielsdsynn
      361 kergqyslin kisfdkcknf fvcqvcgfrs rlhtnvnrhv aiehtkifph vcddcgkgfs
      421 gmleyckhls shlsegiylc qyceystgqi edlkthldfr hsadlphkct dclmrfgnek
      481 dllshlqihe tv
//
LOCUS       XP_041323586             480 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 639 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323586
VERSION     XP_041323586.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467652.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..480
                     /product="zinc finger protein 639 isoform X2"
                     /calculated_mol_wt=55217
     Region          230..250
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(235,237,239,241..242,245..246,249,262,264,268..269,
                     272..273,277,291,293,295,297..298,301..302)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          257..278
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          286..302
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          371..392
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          400..420
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(405,407,409,411..412,415..416,419,433,435,439..440,
                     443..444,462,464,466,468..469,472..473,476)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          428..449
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          457..477
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..480
                     /gene="ZNF639"
                     /coded_by="XM_041467652.1:507..1949"
                     /db_xref="GeneID:121353651"
ORIGIN      
        1 mnehpkkrkr ktlhpsrysd ssgasryidn sgifsdhcys vcsmrqpdin rgrfhspvqs
       61 ldtdddgspv hagsshwsga hsnvgmhctd pkkkdkgkdr gtnngmcrdl cdspifsdsp
      121 teeekpldiq tveisttevn avevhdietq tvspekleae dleeipletc kifeknhaln
      181 itaqqkwpll ranssglykc elcefnskyf sdlkqhmilk hktctdthvc kvckesfssk
      241 vqliehvklh eedpyickyc dyktvifenl sqhiadthfn dhlywceqcd vqfssssely
      301 lhfqehscde qylcqfcehe tndpedlhsh vvnehacrli elsdsynnke rgqyslinki
      361 sfdkcknffv cqvcgfrsrl htnvnrhvai ehtkifphvc ddcgkgfsgm leyckhlssh
      421 lsegiylcqy ceystgqied lkthldfrhs adlphkctdc lmrfgnekdl lshlqihetv
//
LOCUS       XP_041323587             478 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 639 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323587
VERSION     XP_041323587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..478
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..478
                     /product="zinc finger protein 639 isoform X3"
                     /calculated_mol_wt=55032
     Region          228..248
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(233,235,237,239..240,243..244,247,260,262,266..267,
                     270..271,275,289,291,293,295..296,299..300)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          255..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          284..300
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          369..390
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          398..418
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(403,405,407,409..410,413..414,417,431,433,437..438,
                     441..442,460,462,464,466..467,470..471,474)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          426..447
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          455..475
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..478
                     /gene="ZNF639"
                     /coded_by="XM_041467653.1:507..1943"
                     /db_xref="GeneID:121353651"
ORIGIN      
        1 mnehpkkrkr ktlhpsrysd ssgasryidn sgifsdhcys vcsmrqpdin rgrfhspvqs
       61 ldtdddgspv hagsshwsga hsnvgmhctd pkkkdkdrgt nngmcrdlcd spifsdspte
      121 eekpldiqtv eisttevnav evhdietqtv spekleaedl eeipletcki feknhalnit
      181 aqqkwpllra nssglykcel cefnskyfsd lkqhmilkhk tctdthvckv ckesfsskvq
      241 liehvklhee dpyickycdy ktvifenlsq hiadthfndh lywceqcdvq fsssselylh
      301 fqehscdeqy lcqfcehetn dpedlhshvv nehacrliel sdsynnkerg qyslinkisf
      361 dkcknffvcq vcgfrsrlht nvnrhvaieh tkifphvcdd cgkgfsgmle yckhlsshls
      421 egiylcqyce ystgqiedlk thldfrhsad lphkctdclm rfgnekdlls hlqihetv
//
LOCUS       XP_041323588             340 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein subunit beta-4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323588
VERSION     XP_041323588.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467654.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="guanine nucleotide-binding protein subunit
                     beta-4 isoform X1"
                     /calculated_mol_wt=37399
     Region          <1..>58
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          48..340
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(54,72,76,82..83,95..96,114,118,124..125,141..142,
                     159,163,169..170,183,201,205,211..212,224..225,243,247,
                     253..254,265..266,286,291,297..298,310..311,329,333,
                     339..340)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          58..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          101..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          315..339
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..340
                     /gene="GNB4"
                     /coded_by="XM_041467654.1:137..1159"
                     /db_xref="GeneID:121353652"
ORIGIN      
        1 mseleqlrqe aeqlrnqird arkacsdttl aqittsldsv griqmrtrrt lrghlakiya
       61 mhwgsdsrll vsasqdgkli iwdsyttnkm haiplrsswv mtcayapsgn yvacggldni
      121 csiynlktre gnvrvsrelp ghtgylsccr flddnqivts sgdttcalwd ietgqqtttf
      181 tghtgdvmsl slspdmrtfv sgacdasskl wdirdgmcrq sftghvsdin avcffpngha
      241 fatgsddatc rlfdlradqe lmmyshdnii cgitsvafsk sgrlllagyd dfncnvwdtl
      301 kgeragvlag hdnrvsclgv tddgmavatg swdsflriwn
//
LOCUS       XP_041323590             340 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein subunit beta-4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323590
VERSION     XP_041323590.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467656.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="guanine nucleotide-binding protein subunit
                     beta-4 isoform X1"
                     /calculated_mol_wt=37399
     Region          <1..>58
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          48..340
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(54,72,76,82..83,95..96,114,118,124..125,141..142,
                     159,163,169..170,183,201,205,211..212,224..225,243,247,
                     253..254,265..266,286,291,297..298,310..311,329,333,
                     339..340)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          58..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          101..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          315..339
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..340
                     /gene="GNB4"
                     /coded_by="XM_041467656.1:219..1241"
                     /db_xref="GeneID:121353652"
ORIGIN      
        1 mseleqlrqe aeqlrnqird arkacsdttl aqittsldsv griqmrtrrt lrghlakiya
       61 mhwgsdsrll vsasqdgkli iwdsyttnkm haiplrsswv mtcayapsgn yvacggldni
      121 csiynlktre gnvrvsrelp ghtgylsccr flddnqivts sgdttcalwd ietgqqtttf
      181 tghtgdvmsl slspdmrtfv sgacdasskl wdirdgmcrq sftghvsdin avcffpngha
      241 fatgsddatc rlfdlradqe lmmyshdnii cgitsvafsk sgrlllagyd dfncnvwdtl
      301 kgeragvlag hdnrvsclgv tddgmavatg swdsflriwn
//
LOCUS       XP_041323591             340 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein subunit beta-4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323591
VERSION     XP_041323591.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467657.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="guanine nucleotide-binding protein subunit
                     beta-4 isoform X1"
                     /calculated_mol_wt=37399
     Region          <1..>58
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          48..340
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(54,72,76,82..83,95..96,114,118,124..125,141..142,
                     159,163,169..170,183,201,205,211..212,224..225,243,247,
                     253..254,265..266,286,291,297..298,310..311,329,333,
                     339..340)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          58..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          101..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          315..339
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..340
                     /gene="GNB4"
                     /coded_by="XM_041467657.1:346..1368"
                     /db_xref="GeneID:121353652"
ORIGIN      
        1 mseleqlrqe aeqlrnqird arkacsdttl aqittsldsv griqmrtrrt lrghlakiya
       61 mhwgsdsrll vsasqdgkli iwdsyttnkm haiplrsswv mtcayapsgn yvacggldni
      121 csiynlktre gnvrvsrelp ghtgylsccr flddnqivts sgdttcalwd ietgqqtttf
      181 tghtgdvmsl slspdmrtfv sgacdasskl wdirdgmcrq sftghvsdin avcffpngha
      241 fatgsddatc rlfdlradqe lmmyshdnii cgitsvafsk sgrlllagyd dfncnvwdtl
      301 kgeragvlag hdnrvsclgv tddgmavatg swdsflriwn
//
LOCUS       XP_041323592             340 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein subunit beta-4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323592
VERSION     XP_041323592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="guanine nucleotide-binding protein subunit
                     beta-4 isoform X1"
                     /calculated_mol_wt=37399
     Region          <1..>58
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     Region          48..340
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(54,72,76,82..83,95..96,114,118,124..125,141..142,
                     159,163,169..170,183,201,205,211..212,224..225,243,247,
                     253..254,265..266,286,291,297..298,310..311,329,333,
                     339..340)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          58..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          101..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..181
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          188..223
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          229..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          273..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          315..339
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..340
                     /gene="GNB4"
                     /coded_by="XM_041467658.1:116..1138"
                     /db_xref="GeneID:121353652"
ORIGIN      
        1 mseleqlrqe aeqlrnqird arkacsdttl aqittsldsv griqmrtrrt lrghlakiya
       61 mhwgsdsrll vsasqdgkli iwdsyttnkm haiplrsswv mtcayapsgn yvacggldni
      121 csiynlktre gnvrvsrelp ghtgylsccr flddnqivts sgdttcalwd ietgqqtttf
      181 tghtgdvmsl slspdmrtfv sgacdasskl wdirdgmcrq sftghvsdin avcffpngha
      241 fatgsddatc rlfdlradqe lmmyshdnii cgitsvafsk sgrlllagyd dfncnvwdtl
      301 kgeragvlag hdnrvsclgv tddgmavatg swdsflriwn
//
LOCUS       XP_041323593             251 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein subunit beta-4 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323593
VERSION     XP_041323593.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467659.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..251
                     /product="guanine nucleotide-binding protein subunit
                     beta-4 isoform X2"
                     /calculated_mol_wt=27196
     Region          8..251
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Region          12..52
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(25,29,35..36,52..53,70,74,80..81,94,112,116,
                     122..123,135..136,154,158,164..165,176..177,197,202,
                     208..209,221..222,240,244,250..251)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          57..92
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          99..134
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          140..176
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          184..220
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          226..250
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..251
                     /gene="GNB4"
                     /coded_by="XM_041467659.1:126..881"
                     /db_xref="GeneID:121353652"
ORIGIN      
        1 mhaiplrssw vmtcayapsg nyvacggldn icsiynlktr egnvrvsrel pghtgylscc
       61 rflddnqivt ssgdttcalw dietgqqttt ftghtgdvms lslspdmrtf vsgacdassk
      121 lwdirdgmcr qsftghvsdi navcffpngh afatgsddat crlfdlradq elmmyshdni
      181 icgitsvafs ksgrlllagy ddfncnvwdt lkgeragvla ghdnrvsclg vtddgmavat
      241 gswdsflriw n
//
LOCUS       XP_041323594             367 aa            linear   VRT 06-MAY-2021
DEFINITION  choline-phosphate cytidylyltransferase A [Pyrgilauda ruficollis].
ACCESSION   XP_041323594
VERSION     XP_041323594.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467660.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..367
                     /product="choline-phosphate cytidylyltransferase A"
                     /calculated_mol_wt=41971
     Region          72..309
                     /region_name="PLN02413"
                     /note="choline-phosphate cytidylyltransferase"
                     /db_xref="CDD:215229"
     CDS             1..367
                     /gene="PCYT1A"
                     /coded_by="XM_041467660.1:185..1288"
                     /db_xref="GeneID:121353653"
ORIGIN      
        1 mepptssrln srkrrkdgsg pngateldgi ppkmsrrslg lrepapfsde veidyskpyi
       61 rvtyeeamrg tpldrpvrvy adgifdlfhs gharalmqak nlfpntyliv gvcsdelthn
      121 fkgftvmnen erydavqhcr yvdevvrnap wtltpeflae hridfvahdd ipyssagsdd
      181 vykhikeagm faptqrtegi stsdiitriv rdydvyarrn lqrgytakel nvsfinekky
      241 hlqervdkvk krvkdveeks kefvqkveek sidliqkwee ksrefignfl emfgpegalk
      301 hmlkegkgrm lqaispkqsp ssspthersp spsfrwpfst ktppsspanr srnesavtyd
      361 isedeed
//
LOCUS       XP_041323595             367 aa            linear   VRT 06-MAY-2021
DEFINITION  choline-phosphate cytidylyltransferase A [Pyrgilauda ruficollis].
ACCESSION   XP_041323595
VERSION     XP_041323595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..367
                     /product="choline-phosphate cytidylyltransferase A"
                     /calculated_mol_wt=41971
     Region          72..309
                     /region_name="PLN02413"
                     /note="choline-phosphate cytidylyltransferase"
                     /db_xref="CDD:215229"
     CDS             1..367
                     /gene="PCYT1A"
                     /coded_by="XM_041467661.1:685..1788"
                     /db_xref="GeneID:121353653"
ORIGIN      
        1 mepptssrln srkrrkdgsg pngateldgi ppkmsrrslg lrepapfsde veidyskpyi
       61 rvtyeeamrg tpldrpvrvy adgifdlfhs gharalmqak nlfpntyliv gvcsdelthn
      121 fkgftvmnen erydavqhcr yvdevvrnap wtltpeflae hridfvahdd ipyssagsdd
      181 vykhikeagm faptqrtegi stsdiitriv rdydvyarrn lqrgytakel nvsfinekky
      241 hlqervdkvk krvkdveeks kefvqkveek sidliqkwee ksrefignfl emfgpegalk
      301 hmlkegkgrm lqaispkqsp ssspthersp spsfrwpfst ktppsspanr srnesavtyd
      361 isedeed
//
LOCUS       XP_041323596             127 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein light chain Tctex-type protein 2B [Pyrgilauda ruficollis].
ACCESSION   XP_041323596
VERSION     XP_041323596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..127
                     /product="dynein light chain Tctex-type protein 2B"
                     /calculated_mol_wt=14271
     Region          23..126
                     /region_name="DLC-like_TCTEX1D2"
                     /note="dynein light chain (DLC)-like domain found in
                     Tctex1 domain-containing protein 2 (TCTEX1D2) and similar
                     proteins; cd21459"
                     /db_xref="CDD:412007"
     CDS             1..127
                     /gene="DYNLT2B"
                     /coded_by="XM_041467662.1:53..436"
                     /db_xref="GeneID:121353654"
ORIGIN      
        1 mgelgpdega entyslrpgl qhrfksstvk ecirailkek ladvqyipee mpeltkslsd
       61 tikdrlkeeg fdrykmvvqv vigeqrgegv nmaarcfwda dtdscahdvf mndslfcvva
      121 afgcfyy
//
LOCUS       XP_041323597            1623 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323597
VERSION     XP_041323597.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467663.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1623
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X1"
                     /calculated_mol_wt=179368
     Region          <12..529
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          781..1009
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1266..1378
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1462..1594
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1623
                     /gene="EIF4G1"
                     /coded_by="XM_041467663.1:217..5088"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 mnkapqptgg aptaphpaps pglpqptfpp gqtapvvfnp aptsqmntps qprqggfrsl
       61 qhfyqnraqp pasasrvqsn ttarpgppah vypaasqvmm ipsqisytps qgayyipgqg
      121 rstyvvptqq ypvqpgapsf ypgasptefg tyagayypaq gvqqfpagvp taqvivsqqp
      181 pippkrerkt irirdpnqgg kditeeimsg artsstptpp qagsglepqa ngetphvavi
      241 vrpddrpkpa lvvskpvsle psksaspspp pplipevepv vlspvtlvpm eppvdtdtka
      301 eqgeappdpq ktlsaittvp gaaelplvpa pnmdtvaaee eeeeeeevai plpepslqep
      361 vppevppvpv vpsmpavplv paapspppvv pqapeapakp aspsppppre epcpeptaea
      421 ngvleetpet vpeapvcqpv pvsepvpgpt ldspiaqpee lplpngvegt skvepseeqp
      481 esdvspises eepaqpgtpa sppaeeeeee segpgetqer slspapapsq iseataqvam
      541 svpkkkrrmk elnkkeavgd lldafkesqi gdsasevenk ppvsapasea edvaparpqe
      601 eseetweeke dklapekgka agqkygykee qwkplnpeek krydrefllg fqfifasmqk
      661 peglpqitdv vldkpcvpsq anktplraid pirissmncs pdftpsfanl grpvmgnrgl
      721 psglgprrsq qsqrkeprki iatvslnedv klnkaekawk psskraseee dpeniktqel
      781 lrrvrsilnk ltpqmfqqlm kqvmelsidt eerlkgvidl vfekaisepn fsvayanmcr
      841 clmglkvptt dkptvtvnfr klllnrcqke fekdkdddei fekrqkemdd asapeekarm
      901 kdeleeardk arrrslgnik figelfklkm lteaimhdcv vkllknhdee sleclcrllt
      961 tigkdldfek akprmdqyfn qmekiikekk tssrirfmlq dvidlrrnsw vprrgdqgpk
     1021 tidqihkeae meehrehikv qqlmskdkrr gppgpssggr sslvaddgwn tvpiskgnrp
     1081 idtsrltkit kpgsidsnnq lfapggrlsw gkgssggsga kpadsasdsg rpatstlnrf
     1141 salqqsmpae ssesrrvvqr ssssrdrsek agdrgdresr sekgsdrler ldrgervdrn
     1201 rsaltkrsfs ketedrsrer ekqsgpeavr kaasmteerd rsretikqep tlpatstkpa
     1261 lseeelekks kaiieeylhi ndmkealqcv qelgspssly ifvqngiest lerstisreh
     1321 mgallcqlvk agtlskeqyy kglreileia edmeidiphi wlylaelitp ilqeegipme
     1381 elfreitkpl vpigkattll vevlgllckg mgqktagklw rdgglswkef lpedqdvnkf
     1441 vteqkleytm gdssdmpsrk eltseelckq mdkllkenpn nqriydwiea nlseqqvssn
     1501 tfiralmtsv chlaivfenp yrvdamvirn qakllqkylr deqkelqaly alqalvvkld
     1561 qppnllrmff dalydedvik eeafykwess kdpaeqqgkg valksvtaff twlreaedes
     1621 dnn
//
LOCUS       XP_041323598            1623 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323598
VERSION     XP_041323598.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467664.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1623
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X1"
                     /calculated_mol_wt=179368
     Region          <12..529
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          781..1009
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1266..1378
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1462..1594
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1623
                     /gene="EIF4G1"
                     /coded_by="XM_041467664.1:111..4982"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 mnkapqptgg aptaphpaps pglpqptfpp gqtapvvfnp aptsqmntps qprqggfrsl
       61 qhfyqnraqp pasasrvqsn ttarpgppah vypaasqvmm ipsqisytps qgayyipgqg
      121 rstyvvptqq ypvqpgapsf ypgasptefg tyagayypaq gvqqfpagvp taqvivsqqp
      181 pippkrerkt irirdpnqgg kditeeimsg artsstptpp qagsglepqa ngetphvavi
      241 vrpddrpkpa lvvskpvsle psksaspspp pplipevepv vlspvtlvpm eppvdtdtka
      301 eqgeappdpq ktlsaittvp gaaelplvpa pnmdtvaaee eeeeeeevai plpepslqep
      361 vppevppvpv vpsmpavplv paapspppvv pqapeapakp aspsppppre epcpeptaea
      421 ngvleetpet vpeapvcqpv pvsepvpgpt ldspiaqpee lplpngvegt skvepseeqp
      481 esdvspises eepaqpgtpa sppaeeeeee segpgetqer slspapapsq iseataqvam
      541 svpkkkrrmk elnkkeavgd lldafkesqi gdsasevenk ppvsapasea edvaparpqe
      601 eseetweeke dklapekgka agqkygykee qwkplnpeek krydrefllg fqfifasmqk
      661 peglpqitdv vldkpcvpsq anktplraid pirissmncs pdftpsfanl grpvmgnrgl
      721 psglgprrsq qsqrkeprki iatvslnedv klnkaekawk psskraseee dpeniktqel
      781 lrrvrsilnk ltpqmfqqlm kqvmelsidt eerlkgvidl vfekaisepn fsvayanmcr
      841 clmglkvptt dkptvtvnfr klllnrcqke fekdkdddei fekrqkemdd asapeekarm
      901 kdeleeardk arrrslgnik figelfklkm lteaimhdcv vkllknhdee sleclcrllt
      961 tigkdldfek akprmdqyfn qmekiikekk tssrirfmlq dvidlrrnsw vprrgdqgpk
     1021 tidqihkeae meehrehikv qqlmskdkrr gppgpssggr sslvaddgwn tvpiskgnrp
     1081 idtsrltkit kpgsidsnnq lfapggrlsw gkgssggsga kpadsasdsg rpatstlnrf
     1141 salqqsmpae ssesrrvvqr ssssrdrsek agdrgdresr sekgsdrler ldrgervdrn
     1201 rsaltkrsfs ketedrsrer ekqsgpeavr kaasmteerd rsretikqep tlpatstkpa
     1261 lseeelekks kaiieeylhi ndmkealqcv qelgspssly ifvqngiest lerstisreh
     1321 mgallcqlvk agtlskeqyy kglreileia edmeidiphi wlylaelitp ilqeegipme
     1381 elfreitkpl vpigkattll vevlgllckg mgqktagklw rdgglswkef lpedqdvnkf
     1441 vteqkleytm gdssdmpsrk eltseelckq mdkllkenpn nqriydwiea nlseqqvssn
     1501 tfiralmtsv chlaivfenp yrvdamvirn qakllqkylr deqkelqaly alqalvvkld
     1561 qppnllrmff dalydedvik eeafykwess kdpaeqqgkg valksvtaff twlreaedes
     1621 dnn
//
LOCUS       XP_041323599            1619 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323599
VERSION     XP_041323599.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467665.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1619
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X2"
                     /calculated_mol_wt=179008
     Region          <12..529
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          781..1009
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1262..1374
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1458..1590
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1619
                     /gene="EIF4G1"
                     /coded_by="XM_041467665.1:217..5076"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 mnkapqptgg aptaphpaps pglpqptfpp gqtapvvfnp aptsqmntps qprqggfrsl
       61 qhfyqnraqp pasasrvqsn ttarpgppah vypaasqvmm ipsqisytps qgayyipgqg
      121 rstyvvptqq ypvqpgapsf ypgasptefg tyagayypaq gvqqfpagvp taqvivsqqp
      181 pippkrerkt irirdpnqgg kditeeimsg artsstptpp qagsglepqa ngetphvavi
      241 vrpddrpkpa lvvskpvsle psksaspspp pplipevepv vlspvtlvpm eppvdtdtka
      301 eqgeappdpq ktlsaittvp gaaelplvpa pnmdtvaaee eeeeeeevai plpepslqep
      361 vppevppvpv vpsmpavplv paapspppvv pqapeapakp aspsppppre epcpeptaea
      421 ngvleetpet vpeapvcqpv pvsepvpgpt ldspiaqpee lplpngvegt skvepseeqp
      481 esdvspises eepaqpgtpa sppaeeeeee segpgetqer slspapapsq iseataqvam
      541 svpkkkrrmk elnkkeavgd lldafkesqi gdsasevenk ppvsapasea edvaparpqe
      601 eseetweeke dklapekgka agqkygykee qwkplnpeek krydrefllg fqfifasmqk
      661 peglpqitdv vldkpcvpsq anktplraid pirissmncs pdftpsfanl grpvmgnrgl
      721 psglgprrsq qsqrkeprki iatvslnedv klnkaekawk psskraseee dpeniktqel
      781 lrrvrsilnk ltpqmfqqlm kqvmelsidt eerlkgvidl vfekaisepn fsvayanmcr
      841 clmglkvptt dkptvtvnfr klllnrcqke fekdkdddei fekrqkemdd asapeekarm
      901 kdeleeardk arrrslgnik figelfklkm lteaimhdcv vkllknhdee sleclcrllt
      961 tigkdldfek akprmdqyfn qmekiikekk tssrirfmlq dvidlrrnsw vprrgdqgpk
     1021 tidqihkeae meehrehikv qqlmskdkrr gppgpssggr sslvaddgwn tvpiskgnrp
     1081 idtsrltkit kpgsidsnnq lfapggrlsw gkgssggsga kpadsgrpat stlnrfsalq
     1141 qsmpaesses rrvvqrssss rdrsekagdr gdresrsekg sdrlerldrg ervdrnrsal
     1201 tkrsfskete drsrerekqs gpeavrkaas mteerdrsre tikqeptlpa tstkpalsee
     1261 elekkskaii eeylhindmk ealqcvqelg spsslyifvq ngiestlers tisrehmgal
     1321 lcqlvkagtl skeqyykglr eileiaedme idiphiwlyl aelitpilqe egipmeelfr
     1381 eitkplvpig kattllvevl gllckgmgqk tagklwrdgg lswkeflped qdvnkfvteq
     1441 kleytmgdss dmpsrkelts eelckqmdkl lkenpnnqri ydwieanlse qqvssntfir
     1501 almtsvchla ivfenpyrvd amvirnqakl lqkylrdeqk elqalyalqa lvvkldqppn
     1561 llrmffdaly dedvikeeaf ykwesskdpa eqqgkgvalk svtafftwlr eaedesdnn
//
LOCUS       XP_041323600            1617 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323600
VERSION     XP_041323600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1617
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X3"
                     /calculated_mol_wt=178757
     Region          <12..529
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          775..1003
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1260..1372
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1456..1588
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1617
                     /gene="EIF4G1"
                     /coded_by="XM_041467666.1:217..5070"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 mnkapqptgg aptaphpaps pglpqptfpp gqtapvvfnp aptsqmntps qprqggfrsl
       61 qhfyqnraqp pasasrvqsn ttarpgppah vypaasqvmm ipsqisytps qgayyipgqg
      121 rstyvvptqq ypvqpgapsf ypgasptefg tyagayypaq gvqqfpagvp taqvivsqqp
      181 pippkrerkt irirdpnqgg kditeeimsg artsstptpp qagsglepqa ngetphvavi
      241 vrpddrpkpa lvvskpvsle psksaspspp pplipevepv vlspvtlvpm eppvdtdtka
      301 eqgeappdpq ktlsaittvp gaaelplvpa pnmdtvaaee eeeeeeevai plpepslqep
      361 vppevppvpv vpsmpavplv paapspppvv pqapeapakp aspsppppre epcpeptaea
      421 ngvleetpet vpeapvcqpv pvsepvpgpt ldspiaqpee lplpngvegt skvepseeqp
      481 esdvspises eepaqpgtpa sppaeeeeee segpgetqer slspapapsq iseataqvam
      541 svpkkkrrmk elnkkeavgd lldafkesqi gdsasevenk ppvsapasea edvaparpqe
      601 eseetweeke dklapekgka agqkygykee qwkplnpeek krydrefllg fqfifasmqk
      661 peglpqitdv vldkanktpl raidpiriss mncspdftps fanlgrpvmg nrglpsglgp
      721 rrsqqsqrke prkiiatvsl nedvklnkae kawkpsskra seeedpenik tqellrrvrs
      781 ilnkltpqmf qqlmkqvmel sidteerlkg vidlvfekai sepnfsvaya nmcrclmglk
      841 vpttdkptvt vnfrklllnr cqkefekdkd ddeifekrqk emddasapee karmkdelee
      901 ardkarrrsl gnikfigelf klkmlteaim hdcvvkllkn hdeesleclc rllttigkdl
      961 dfekakprmd qyfnqmekii kekktssrir fmlqdvidlr rnswvprrgd qgpktidqih
     1021 keaemeehre hikvqqlmsk dkrrgppgps sggrsslvad dgwntvpisk gnrpidtsrl
     1081 tkitkpgsid snnqlfapgg rlswgkgssg gsgakpadsa sdsgrpatst lnrfsalqqs
     1141 mpaessesrr vvqrssssrd rsekagdrgd resrsekgsd rlerldrger vdrnrsaltk
     1201 rsfsketedr srerekqsgp eavrkaasmt eerdrsreti kqeptlpats tkpalseeel
     1261 ekkskaiiee ylhindmkea lqcvqelgsp sslyifvqng iestlersti srehmgallc
     1321 qlvkagtlsk eqyykglrei leiaedmeid iphiwlylae litpilqeeg ipmeelfrei
     1381 tkplvpigka ttllvevlgl lckgmgqkta gklwrdggls wkeflpedqd vnkfvteqkl
     1441 eytmgdssdm psrkeltsee lckqmdkllk enpnnqriyd wieanlseqq vssntfiral
     1501 mtsvchlaiv fenpyrvdam virnqakllq kylrdeqkel qalyalqalv vkldqppnll
     1561 rmffdalyde dvikeeafyk wesskdpaeq qgkgvalksv tafftwlrea edesdnn
//
LOCUS       XP_041323601            1616 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323601
VERSION     XP_041323601.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467667.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1616
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X4"
                     /calculated_mol_wt=178623
     Region          <12..522
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          774..1002
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1259..1371
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1455..1587
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1616
                     /gene="EIF4G1"
                     /coded_by="XM_041467667.1:217..5067"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 mnkapqptgg aptaphpaps pglpqptfpp gqtapvvfnp aptsqmntps qprqhfyqnr
       61 aqppasasrv qsnttarpgp pahvypaasq vmmipsqisy tpsqgayyip gqgrstyvvp
      121 tqqypvqpga psfypgaspt efgtyagayy paqgvqqfpa gvptaqvivs qqppippkre
      181 rktirirdpn qggkditeei msgartsstp tppqagsgle pqangetphv avivrpddrp
      241 kpalvvskpv slepsksasp spppplipev epvvlspvtl vpmeppvdtd tkaeqgeapp
      301 dpqktlsait tvpgaaelpl vpapnmdtva aeeeeeeeee vaiplpepsl qepvppevpp
      361 vpvvpsmpav plvpaapspp pvvpqapeap akpaspsppp preepcpept aeangvleet
      421 petvpeapvc qpvpvsepvp gptldspiaq peelplpngv egtskvepse eqpesdvspi
      481 seseepaqpg tpasppaeee eeesegpget qerslspapa psqiseataq vamsvpkkkr
      541 rmkelnkkea vgdlldafke sqigdsasev enkppvsapa seaedvapar pqeeseetwe
      601 ekedklapek gkaagqkygy keeqwkplnp eekkrydref llgfqfifas mqkpeglpqi
      661 tdvvldkpcv psqanktplr aidpirissm ncspdftpsf anlgrpvmgn rglpsglgpr
      721 rsqqsqrkep rkiiatvsln edvklnkaek awkpsskras eeedpenikt qellrrvrsi
      781 lnkltpqmfq qlmkqvmels idteerlkgv idlvfekais epnfsvayan mcrclmglkv
      841 pttdkptvtv nfrklllnrc qkefekdkdd deifekrqke mddasapeek armkdeleea
      901 rdkarrrslg nikfigelfk lkmlteaimh dcvvkllknh deesleclcr llttigkdld
      961 fekakprmdq yfnqmekiik ekktssrirf mlqdvidlrr nswvprrgdq gpktidqihk
     1021 eaemeehreh ikvqqlmskd krrgppgpss ggrsslvadd gwntvpiskg nrpidtsrlt
     1081 kitkpgsids nnqlfapggr lswgkgssgg sgakpadsas dsgrpatstl nrfsalqqsm
     1141 paessesrrv vqrssssrdr sekagdrgdr esrsekgsdr lerldrgerv drnrsaltkr
     1201 sfsketedrs rerekqsgpe avrkaasmte erdrsretik qeptlpatst kpalseeele
     1261 kkskaiieey lhindmkeal qcvqelgsps slyifvqngi estlerstis rehmgallcq
     1321 lvkagtlske qyykglreil eiaedmeidi phiwlylael itpilqeegi pmeelfreit
     1381 kplvpigkat tllvevlgll ckgmgqktag klwrdgglsw keflpedqdv nkfvteqkle
     1441 ytmgdssdmp srkeltseel ckqmdkllke npnnqriydw ieanlseqqv ssntfiralm
     1501 tsvchlaivf enpyrvdamv irnqakllqk ylrdeqkelq alyalqalvv kldqppnllr
     1561 mffdalyded vikeeafykw esskdpaeqq gkgvalksvt afftwlreae desdnn
//
LOCUS       XP_041323602            1574 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323602
VERSION     XP_041323602.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467668.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1574
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X5"
                     /calculated_mol_wt=174489
     Region          <379..>549
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          732..960
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1217..1329
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1413..1545
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1574
                     /gene="EIF4G1"
                     /coded_by="XM_041467668.1:229..4953"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 mswvgwtqaa pqhfyqnraq ppasasrvqs nttarpgppa hvypaasqvm mipsqisytp
       61 sqgayyipgq grstyvvptq qypvqpgaps fypgasptef gtyagayypa qgvqqfpagv
      121 ptaqvivsqq ppippkrerk tirirdpnqg gkditeeims gartsstptp pqagsglepq
      181 angetphvav ivrpddrpkp alvvskpvsl epsksaspsp ppplipevep vvlspvtlvp
      241 meppvdtdtk aeqgeappdp qktlsaittv pgaaelplvp apnmdtvaae eeeeeeeeva
      301 iplpepslqe pvppevppvp vvpsmpavpl vpaapspppv vpqapeapak paspsppppr
      361 eepcpeptae angvleetpe tvpeapvcqp vpvsepvpgp tldspiaqpe elplpngveg
      421 tskvepseeq pesdvspise seepaqpgtp asppaeeeee esegpgetqe rslspapaps
      481 qiseataqva msvpkkkrrm kelnkkeavg dlldafkesq igdsaseven kppvsapase
      541 aedvaparpq eeseetweek edklapekgk aagqkygyke eqwkplnpee kkrydrefll
      601 gfqfifasmq kpeglpqitd vvldkpcvps qanktplrai dpirissmnc spdftpsfan
      661 lgrpvmgnrg lpsglgprrs qqsqrkeprk iiatvslned vklnkaekaw kpsskrasee
      721 edpeniktqe llrrvrsiln kltpqmfqql mkqvmelsid teerlkgvid lvfekaisep
      781 nfsvayanmc rclmglkvpt tdkptvtvnf rklllnrcqk efekdkddde ifekrqkemd
      841 dasapeekar mkdeleeard karrrslgni kfigelfklk mlteaimhdc vvkllknhde
      901 esleclcrll ttigkdldfe kakprmdqyf nqmekiikek ktssrirfml qdvidlrrns
      961 wvprrgdqgp ktidqihkea emeehrehik vqqlmskdkr rgppgpssgg rsslvaddgw
     1021 ntvpiskgnr pidtsrltki tkpgsidsnn qlfapggrls wgkgssggsg akpadsasds
     1081 grpatstlnr fsalqqsmpa essesrrvvq rssssrdrse kagdrgdres rsekgsdrle
     1141 rldrgervdr nrsaltkrsf sketedrsre rekqsgpeav rkaasmteer drsretikqe
     1201 ptlpatstkp alseeelekk skaiieeylh indmkealqc vqelgspssl yifvqngies
     1261 tlerstisre hmgallcqlv kagtlskeqy ykglreilei aedmeidiph iwlylaelit
     1321 pilqeegipm eelfreitkp lvpigkattl lvevlgllck gmgqktagkl wrdgglswke
     1381 flpedqdvnk fvteqkleyt mgdssdmpsr keltseelck qmdkllkenp nnqriydwie
     1441 anlseqqvss ntfiralmts vchlaivfen pyrvdamvir nqakllqkyl rdeqkelqal
     1501 yalqalvvkl dqppnllrmf fdalydedvi keeafykwes skdpaeqqgk gvalksvtaf
     1561 ftwlreaede sdnn
//
LOCUS       XP_041323604            1416 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323604
VERSION     XP_041323604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1416
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X6"
                     /calculated_mol_wt=157361
     Region          <221..>391
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          574..802
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1059..1171
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1255..1387
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1416
                     /gene="EIF4G1"
                     /coded_by="XM_041467670.1:284..4534"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 msgartsstp tppqagsgle pqangetphv avivrpddrp kpalvvskpv slepsksasp
       61 spppplipev epvvlspvtl vpmeppvdtd tkaeqgeapp dpqktlsait tvpgaaelpl
      121 vpapnmdtva aeeeeeeeee vaiplpepsl qepvppevpp vpvvpsmpav plvpaapspp
      181 pvvpqapeap akpaspsppp preepcpept aeangvleet petvpeapvc qpvpvsepvp
      241 gptldspiaq peelplpngv egtskvepse eqpesdvspi seseepaqpg tpasppaeee
      301 eeesegpget qerslspapa psqiseataq vamsvpkkkr rmkelnkkea vgdlldafke
      361 sqigdsasev enkppvsapa seaedvapar pqeeseetwe ekedklapek gkaagqkygy
      421 keeqwkplnp eekkrydref llgfqfifas mqkpeglpqi tdvvldkpcv psqanktplr
      481 aidpirissm ncspdftpsf anlgrpvmgn rglpsglgpr rsqqsqrkep rkiiatvsln
      541 edvklnkaek awkpsskras eeedpenikt qellrrvrsi lnkltpqmfq qlmkqvmels
      601 idteerlkgv idlvfekais epnfsvayan mcrclmglkv pttdkptvtv nfrklllnrc
      661 qkefekdkdd deifekrqke mddasapeek armkdeleea rdkarrrslg nikfigelfk
      721 lkmlteaimh dcvvkllknh deesleclcr llttigkdld fekakprmdq yfnqmekiik
      781 ekktssrirf mlqdvidlrr nswvprrgdq gpktidqihk eaemeehreh ikvqqlmskd
      841 krrgppgpss ggrsslvadd gwntvpiskg nrpidtsrlt kitkpgsids nnqlfapggr
      901 lswgkgssgg sgakpadsas dsgrpatstl nrfsalqqsm paessesrrv vqrssssrdr
      961 sekagdrgdr esrsekgsdr lerldrgerv drnrsaltkr sfsketedrs rerekqsgpe
     1021 avrkaasmte erdrsretik qeptlpatst kpalseeele kkskaiieey lhindmkeal
     1081 qcvqelgsps slyifvqngi estlerstis rehmgallcq lvkagtlske qyykglreil
     1141 eiaedmeidi phiwlylael itpilqeegi pmeelfreit kplvpigkat tllvevlgll
     1201 ckgmgqktag klwrdgglsw keflpedqdv nkfvteqkle ytmgdssdmp srkeltseel
     1261 ckqmdkllke npnnqriydw ieanlseqqv ssntfiralm tsvchlaivf enpyrvdamv
     1321 irnqakllqk ylrdeqkelq alyalqalvv kldqppnllr mffdalyded vikeeafykw
     1381 esskdpaeqq gkgvalksvt afftwlreae desdnn
//
LOCUS       XP_041323605            1416 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323605
VERSION     XP_041323605.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467671.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1416
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X6"
                     /calculated_mol_wt=157361
     Region          <221..>391
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          574..802
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1059..1171
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1255..1387
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1416
                     /gene="EIF4G1"
                     /coded_by="XM_041467671.1:347..4597"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 msgartsstp tppqagsgle pqangetphv avivrpddrp kpalvvskpv slepsksasp
       61 spppplipev epvvlspvtl vpmeppvdtd tkaeqgeapp dpqktlsait tvpgaaelpl
      121 vpapnmdtva aeeeeeeeee vaiplpepsl qepvppevpp vpvvpsmpav plvpaapspp
      181 pvvpqapeap akpaspsppp preepcpept aeangvleet petvpeapvc qpvpvsepvp
      241 gptldspiaq peelplpngv egtskvepse eqpesdvspi seseepaqpg tpasppaeee
      301 eeesegpget qerslspapa psqiseataq vamsvpkkkr rmkelnkkea vgdlldafke
      361 sqigdsasev enkppvsapa seaedvapar pqeeseetwe ekedklapek gkaagqkygy
      421 keeqwkplnp eekkrydref llgfqfifas mqkpeglpqi tdvvldkpcv psqanktplr
      481 aidpirissm ncspdftpsf anlgrpvmgn rglpsglgpr rsqqsqrkep rkiiatvsln
      541 edvklnkaek awkpsskras eeedpenikt qellrrvrsi lnkltpqmfq qlmkqvmels
      601 idteerlkgv idlvfekais epnfsvayan mcrclmglkv pttdkptvtv nfrklllnrc
      661 qkefekdkdd deifekrqke mddasapeek armkdeleea rdkarrrslg nikfigelfk
      721 lkmlteaimh dcvvkllknh deesleclcr llttigkdld fekakprmdq yfnqmekiik
      781 ekktssrirf mlqdvidlrr nswvprrgdq gpktidqihk eaemeehreh ikvqqlmskd
      841 krrgppgpss ggrsslvadd gwntvpiskg nrpidtsrlt kitkpgsids nnqlfapggr
      901 lswgkgssgg sgakpadsas dsgrpatstl nrfsalqqsm paessesrrv vqrssssrdr
      961 sekagdrgdr esrsekgsdr lerldrgerv drnrsaltkr sfsketedrs rerekqsgpe
     1021 avrkaasmte erdrsretik qeptlpatst kpalseeele kkskaiieey lhindmkeal
     1081 qcvqelgsps slyifvqngi estlerstis rehmgallcq lvkagtlske qyykglreil
     1141 eiaedmeidi phiwlylael itpilqeegi pmeelfreit kplvpigkat tllvevlgll
     1201 ckgmgqktag klwrdgglsw keflpedqdv nkfvteqkle ytmgdssdmp srkeltseel
     1261 ckqmdkllke npnnqriydw ieanlseqqv ssntfiralm tsvchlaivf enpyrvdamv
     1321 irnqakllqk ylrdeqkelq alyalqalvv kldqppnllr mffdalyded vikeeafykw
     1381 esskdpaeqq gkgvalksvt afftwlreae desdnn
//
LOCUS       XP_041323606            1610 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4 gamma 1 isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323606
VERSION     XP_041323606.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467672.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1610
                     /product="eukaryotic translation initiation factor 4 gamma
                     1 isoform X7"
                     /calculated_mol_wt=178011
     Region          <12..522
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          768..996
                     /region_name="MIF4G"
                     /note="MIF4G domain; pfam02854"
                     /db_xref="CDD:397130"
     Region          1253..1365
                     /region_name="MA3"
                     /note="MA3 domain; pfam02847"
                     /db_xref="CDD:397128"
     Region          1449..1581
                     /region_name="W2_eIF4G1_like"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 4 gamma 1 and similar proteins; cd11559"
                     /db_xref="CDD:211397"
     CDS             1..1610
                     /gene="EIF4G1"
                     /coded_by="XM_041467672.1:217..5049"
                     /db_xref="GeneID:121353655"
ORIGIN      
        1 mnkapqptgg aptaphpaps pglpqptfpp gqtapvvfnp aptsqmntps qprqhfyqnr
       61 aqppasasrv qsnttarpgp pahvypaasq vmmipsqisy tpsqgayyip gqgrstyvvp
      121 tqqypvqpga psfypgaspt efgtyagayy paqgvqqfpa gvptaqvivs qqppippkre
      181 rktirirdpn qggkditeei msgartsstp tppqagsgle pqangetphv avivrpddrp
      241 kpalvvskpv slepsksasp spppplipev epvvlspvtl vpmeppvdtd tkaeqgeapp
      301 dpqktlsait tvpgaaelpl vpapnmdtva aeeeeeeeee vaiplpepsl qepvppevpp
      361 vpvvpsmpav plvpaapspp pvvpqapeap akpaspsppp preepcpept aeangvleet
      421 petvpeapvc qpvpvsepvp gptldspiaq peelplpngv egtskvepse eqpesdvspi
      481 seseepaqpg tpasppaeee eeesegpget qerslspapa psqiseataq vamsvpkkkr
      541 rmkelnkkea vgdlldafke sqigdsasev enkppvsapa seaedvapar pqeeseetwe
      601 ekedklapek gkaagqkygy keeqwkplnp eekkrydref llgfqfifas mqkpeglpqi
      661 tdvvldkank tplraidpir issmncspdf tpsfanlgrp vmgnrglpsg lgprrsqqsq
      721 rkeprkiiat vslnedvkln kaekawkpss kraseeedpe niktqellrr vrsilnkltp
      781 qmfqqlmkqv melsidteer lkgvidlvfe kaisepnfsv ayanmcrclm glkvpttdkp
      841 tvtvnfrkll lnrcqkefek dkdddeifek rqkemddasa peekarmkde leeardkarr
      901 rslgnikfig elfklkmlte aimhdcvvkl lknhdeesle clcrllttig kdldfekakp
      961 rmdqyfnqme kiikekktss rirfmlqdvi dlrrnswvpr rgdqgpktid qihkeaemee
     1021 hrehikvqql mskdkrrgpp gpssggrssl vaddgwntvp iskgnrpidt srltkitkpg
     1081 sidsnnqlfa pggrlswgkg ssggsgakpa dsasdsgrpa tstlnrfsal qqsmpaesse
     1141 srrvvqrsss srdrsekagd rgdresrsek gsdrlerldr gervdrnrsa ltkrsfsket
     1201 edrsrerekq sgpeavrkaa smteerdrsr etikqeptlp atstkpalse eelekkskai
     1261 ieeylhindm kealqcvqel gspsslyifv qngiestler stisrehmga llcqlvkagt
     1321 lskeqyykgl reileiaedm eidiphiwly laelitpilq eegipmeelf reitkplvpi
     1381 gkattllvev lgllckgmgq ktagklwrdg glswkeflpe dqdvnkfvte qkleytmgds
     1441 sdmpsrkelt seelckqmdk llkenpnnqr iydwieanls eqqvssntfi ralmtsvchl
     1501 aivfenpyrv damvirnqak llqkylrdeq kelqalyalq alvvkldqpp nllrmffdal
     1561 ydedvikeea fykwesskdp aeqqgkgval ksvtafftwl reaedesdnn
//
LOCUS       XP_041323607            1097 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323607
VERSION     XP_041323607.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467673.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1097
                     /product="activated CDC42 kinase 1 isoform X1"
                     /calculated_mol_wt=121969
     Region          <86..131
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          191..448
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331,350..354,363,397)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(313,317,350..354,363,397)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(330..340,342..356)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          454..502
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          510..575
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <627..867
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          847..918
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     Region          1026..1062
                     /region_name="UBA_ACK1"
                     /note="UBA domain found in activated Cdc42 kinase 1 (ACK1)
                     and similar proteins; cd14274"
                     /db_xref="CDD:270460"
     CDS             1..1097
                     /gene="TNK2"
                     /coded_by="XM_041467673.1:104..3397"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mgercdyqrl ssaeeeeemh gplphsfsds tgqralrlgs rrptppprqd iapgmpcrrr
       61 lscsmqaeeg tdwllellte lqlqqyflri rdelnvtrls hfeyvknedl ekigmgrpgq
      121 rrlweavkrr kamckrkswm skvfsgkrpe selppqpqst frkpptpppp eaggqhsltc
      181 lvrerdlsif eklgdgsfgv vrrgewctpa gktlnvavkc lktdvlsqpe alddfirevn
      241 amhsldhrnl irlygvvlsh pmkmvtelap lgslldrlrk nqghflistl cqyaiqvakg
      301 mayleskrfi hrdlaarnil lasnelvkig dfglmralpk nddhyvmqeh rkvpfawcap
      361 eslktrtfsh asdtwmfgvt lwemftygqe pwiglngsqi lhkidkeger lprpedcpqd
      421 iynvmlqcwa hkpedrptfv alrdflveaq ptdmralqdf eepdklhiqm ndiitviegr
      481 aenywwrgqn krtlkvgqfp rntvtsvagl sahdisqplk nsfihtghgd tnpqhcwgfp
      541 dkidelylgn pldppdilgv dasaarptql pgrakrqppp rppqptvllt kpcydpvsee
      601 eeglpgglrk lclkkpgtgk glrpvkpsar vpgtkvgerq pgrlasegpa ssevtlidfg
      661 eevpqgspsp vgdltapsla klameafsll dktppqsptr alprplhptp vvdwdsrplp
      721 pppayddvaq deddievcsi tsppsrrgkt nygfvdeger gpalednlfl ppketkqpsm
      781 tqttelfeel qqecmkrlnv plgpaapadd kpqipprvpi pprplrrnep grwsgdlspa
      841 sggeedrppq ipprdplsqp tsrtpspmal qvgspqqraa lcsclstspg kpmpttqsfa
      901 ldpkyatpkv iqaqgkdcsk gpcilpivkd gqkvssthyy llperpayld kyekffkeak
      961 speevaasrq vttatvrpmv qqplsdckan fssnnsnpgp kclvkascsl qkivydgpdv
     1021 crpadkirlv qdtvhgvtte ecqaalqshg wstqraiqyl kvvtagtgra vlhpeqasrh
     1081 gaspaastht tccrtld
//
LOCUS       XP_041323608            1090 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323608
VERSION     XP_041323608.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467674.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1090
                     /product="activated CDC42 kinase 1 isoform X2"
                     /calculated_mol_wt=121786
     Region          <86..131
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          191..448
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331,350..354,363,397)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(313,317,350..354,363,397)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(330..340,342..356)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          454..502
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          510..575
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <555..852
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          832..903
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     Region          1011..1054
                     /region_name="UBA_ACK1"
                     /note="UBA domain found in activated Cdc42 kinase 1 (ACK1)
                     and similar proteins; cd14274"
                     /db_xref="CDD:270460"
     Region          1041..1080
                     /region_name="UBA_TNK1"
                     /note="UBA domain found in non-receptor tyrosine-protein
                     kinase TNK1 and similar proteins; cd14328"
                     /db_xref="CDD:270513"
     CDS             1..1090
                     /gene="TNK2"
                     /coded_by="XM_041467674.1:100..3372"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mgercdyqrl ssaeeeeemh gplphsfsds tgqralrlgs rrptppprqd iapgmpcrrr
       61 lscsmqaeeg tdwllellte lqlqqyflri rdelnvtrls hfeyvknedl ekigmgrpgq
      121 rrlweavkrr kamckrkswm skvfsgkrpe selppqpqst frkpptpppp eaggqhsltc
      181 lvrerdlsif eklgdgsfgv vrrgewctpa gktlnvavkc lktdvlsqpe alddfirevn
      241 amhsldhrnl irlygvvlsh pmkmvtelap lgslldrlrk nqghflistl cqyaiqvakg
      301 mayleskrfi hrdlaarnil lasnelvkig dfglmralpk nddhyvmqeh rkvpfawcap
      361 eslktrtfsh asdtwmfgvt lwemftygqe pwiglngsqi lhkidkeger lprpedcpqd
      421 iynvmlqcwa hkpedrptfv alrdflveaq ptdmralqdf eepdklhiqm ndiitviegr
      481 aenywwrgqn krtlkvgqfp rntvtsvagl sahdisqplk nsfihtghgd tnpqhcwgfp
      541 dkidelylgn pldppdilgv dasaarptql pgrakkpcyd pvseeeeglp gglrklclkk
      601 pgtgkglrpv kpsarvpgtk vgerqpgrla segpassevt lidfgeevpq gspspvgdlt
      661 apslaklame afslldktpp qsptralprp lhptpvvdwd srplppppay ddvaqdeddi
      721 evcsitspps rrgktnygfv degergpale dnlflppket kqpsmtqtte lfeelqqecm
      781 krlnvplgpa apaddkpqip prvpipprpl rrnepgrwsg dlspasggee drppqipprd
      841 plsqptsrtp spmalqvgsp qqraalcscl stspgkpmpt tqsfaldpky atpkviqaqg
      901 kdcskgpcil pivkdgqkvs sthyyllper payldkyekf fkeakspeev aasrqvttat
      961 vrpmvqqpls dckanfssnn snpgpkclvk ascslqkivy dgpdvcrpad kirlvqdtvh
     1021 gvtteecqaa lqshgwstqr aiqylkveql fclglksrge cqrvlemfdw nlaqasshll
     1081 dpysatrqkw
//
LOCUS       XP_041323609            1065 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323609
VERSION     XP_041323609.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467675.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1065
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1065
                     /product="activated CDC42 kinase 1 isoform X3"
                     /calculated_mol_wt=118401
     Region          <86..131
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          191..448
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331,350..354,363,397)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(313,317,350..354,363,397)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(330..340,342..356)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          454..502
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          510..575
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <627..867
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          847..918
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     CDS             1..1065
                     /gene="TNK2"
                     /coded_by="XM_041467675.1:103..3300"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mgercdyqrl ssaeeeeemh gplphsfsds tgqralrlgs rrptppprqd iapgmpcrrr
       61 lscsmqaeeg tdwllellte lqlqqyflri rdelnvtrls hfeyvknedl ekigmgrpgq
      121 rrlweavkrr kamckrkswm skvfsgkrpe selppqpqst frkpptpppp eaggqhsltc
      181 lvrerdlsif eklgdgsfgv vrrgewctpa gktlnvavkc lktdvlsqpe alddfirevn
      241 amhsldhrnl irlygvvlsh pmkmvtelap lgslldrlrk nqghflistl cqyaiqvakg
      301 mayleskrfi hrdlaarnil lasnelvkig dfglmralpk nddhyvmqeh rkvpfawcap
      361 eslktrtfsh asdtwmfgvt lwemftygqe pwiglngsqi lhkidkeger lprpedcpqd
      421 iynvmlqcwa hkpedrptfv alrdflveaq ptdmralqdf eepdklhiqm ndiitviegr
      481 aenywwrgqn krtlkvgqfp rntvtsvagl sahdisqplk nsfihtghgd tnpqhcwgfp
      541 dkidelylgn pldppdilgv dasaarptql pgrakrqppp rppqptvllt kpcydpvsee
      601 eeglpgglrk lclkkpgtgk glrpvkpsar vpgtkvgerq pgrlasegpa ssevtlidfg
      661 eevpqgspsp vgdltapsla klameafsll dktppqsptr alprplhptp vvdwdsrplp
      721 pppayddvaq deddievcsi tsppsrrgkt nygfvdeger gpalednlfl ppketkqpsm
      781 tqttelfeel qqecmkrlnv plgpaapadd kpqipprvpi pprplrrnep grwsgdlspa
      841 sggeedrppq ipprdplsqp tsrtpspmal qvgspqqraa lcsclstspg kpmpttqsfa
      901 ldpkyatpkv iqaqgkdcsk gpcilpivkd gqkvssthyy llperpayld kyekffkeak
      961 speevaasrq vttatvrpmv qqplsdckan fssnnsnpgp kclvkascsl qkivydgpdv
     1021 crpadkirlv vtagtgravl hpeqasrhga spaasthttc crtld
//
LOCUS       XP_041323610            1105 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323610
VERSION     XP_041323610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467676.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1105
                     /product="activated CDC42 kinase 1 isoform X4"
                     /calculated_mol_wt=123465
     Region          <86..131
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          191..448
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331,350..354,363,397)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(193..195,201,217,219,266..269,273,313,317..318,320,
                     331)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(313,317,350..354,363,397)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(330..340,342..356)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          454..502
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          510..575
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <627..867
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          847..918
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     Region          1026..1069
                     /region_name="UBA_ACK1"
                     /note="UBA domain found in activated Cdc42 kinase 1 (ACK1)
                     and similar proteins; cd14274"
                     /db_xref="CDD:270460"
     Region          1056..1095
                     /region_name="UBA_TNK1"
                     /note="UBA domain found in non-receptor tyrosine-protein
                     kinase TNK1 and similar proteins; cd14328"
                     /db_xref="CDD:270513"
     CDS             1..1105
                     /gene="TNK2"
                     /coded_by="XM_041467676.1:613..3930"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mgercdyqrl ssaeeeeemh gplphsfsds tgqralrlgs rrptppprqd iapgmpcrrr
       61 lscsmqaeeg tdwllellte lqlqqyflri rdelnvtrls hfeyvknedl ekigmgrpgq
      121 rrlweavkrr kamckrkswm skvfsgkrpe selppqpqst frkpptpppp eaggqhsltc
      181 lvrerdlsif eklgdgsfgv vrrgewctpa gktlnvavkc lktdvlsqpe alddfirevn
      241 amhsldhrnl irlygvvlsh pmkmvtelap lgslldrlrk nqghflistl cqyaiqvakg
      301 mayleskrfi hrdlaarnil lasnelvkig dfglmralpk nddhyvmqeh rkvpfawcap
      361 eslktrtfsh asdtwmfgvt lwemftygqe pwiglngsqi lhkidkeger lprpedcpqd
      421 iynvmlqcwa hkpedrptfv alrdflveaq ptdmralqdf eepdklhiqm ndiitviegr
      481 aenywwrgqn krtlkvgqfp rntvtsvagl sahdisqplk nsfihtghgd tnpqhcwgfp
      541 dkidelylgn pldppdilgv dasaarptql pgrakrqppp rppqptvllt kpcydpvsee
      601 eeglpgglrk lclkkpgtgk glrpvkpsar vpgtkvgerq pgrlasegpa ssevtlidfg
      661 eevpqgspsp vgdltapsla klameafsll dktppqsptr alprplhptp vvdwdsrplp
      721 pppayddvaq deddievcsi tsppsrrgkt nygfvdeger gpalednlfl ppketkqpsm
      781 tqttelfeel qqecmkrlnv plgpaapadd kpqipprvpi pprplrrnep grwsgdlspa
      841 sggeedrppq ipprdplsqp tsrtpspmal qvgspqqraa lcsclstspg kpmpttqsfa
      901 ldpkyatpkv iqaqgkdcsk gpcilpivkd gqkvssthyy llperpayld kyekffkeak
      961 speevaasrq vttatvrpmv qqplsdckan fssnnsnpgp kclvkascsl qkivydgpdv
     1021 crpadkirlv qdtvhgvtte ecqaalqshg wstqraiqyl kveqlfclgl ksrgecqrvl
     1081 emfdwnlaqa sshlldpysa trqkw
//
LOCUS       XP_041323611            1067 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323611
VERSION     XP_041323611.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467677.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1067
                     /product="activated CDC42 kinase 1 isoform X5"
                     /calculated_mol_wt=119585
     Region          <48..93
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          153..410
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(155..157,163,179,181,228..231,235,275,279..280,282,
                     293,312..316,325,359)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(155..157,163,179,181,228..231,235,275,279..280,282,
                     293)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(275,279,312..316,325,359)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(292..302,304..318)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          416..464
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          472..537
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <589..829
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          809..880
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     Region          988..1031
                     /region_name="UBA_ACK1"
                     /note="UBA domain found in activated Cdc42 kinase 1 (ACK1)
                     and similar proteins; cd14274"
                     /db_xref="CDD:270460"
     Region          1018..1057
                     /region_name="UBA_TNK1"
                     /note="UBA domain found in non-receptor tyrosine-protein
                     kinase TNK1 and similar proteins; cd14328"
                     /db_xref="CDD:270513"
     CDS             1..1067
                     /gene="TNK2"
                     /coded_by="XM_041467677.1:1172..4375"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mrrfqalhrs fpfltrfrly rrlscsmqae egtdwllell telqlqqyfl rirdelnvtr
       61 lshfeyvkne dlekigmgrp gqrrlweavk rrkamckrks wmskvfsgkr peselppqpq
      121 stfrkpptpp ppeaggqhsl tclvrerdls ifeklgdgsf gvvrrgewct pagktlnvav
      181 kclktdvlsq pealddfire vnamhsldhr nlirlygvvl shpmkmvtel aplgslldrl
      241 rknqghflis tlcqyaiqva kgmayleskr fihrdlaarn illasnelvk igdfglmral
      301 pknddhyvmq ehrkvpfawc apeslktrtf shasdtwmfg vtlwemftyg qepwiglngs
      361 qilhkidkeg erlprpedcp qdiynvmlqc wahkpedrpt fvalrdflve aqptdmralq
      421 dfeepdklhi qmndiitvie graenywwrg qnkrtlkvgq fprntvtsva glsahdisqp
      481 lknsfihtgh gdtnpqhcwg fpdkidelyl gnpldppdil gvdasaarpt qlpgrakrqp
      541 pprppqptvl ltkpcydpvs eeeeglpggl rklclkkpgt gkglrpvkps arvpgtkvge
      601 rqpgrlaseg passevtlid fgeevpqgsp spvgdltaps laklameafs lldktppqsp
      661 tralprplhp tpvvdwdsrp lppppayddv aqdeddievc sitsppsrrg ktnygfvdeg
      721 ergpalednl flppketkqp smtqttelfe elqqecmkrl nvplgpaapa ddkpqipprv
      781 pipprplrrn epgrwsgdls pasggeedrp pqipprdpls qptsrtpspm alqvgspqqr
      841 aalcsclsts pgkpmpttqs faldpkyatp kviqaqgkdc skgpcilpiv kdgqkvssth
      901 yyllperpay ldkyekffke akspeevaas rqvttatvrp mvqqplsdck anfssnnsnp
      961 gpkclvkasc slqkivydgp dvcrpadkir lvqdtvhgvt teecqaalqs hgwstqraiq
     1021 ylkveqlfcl glksrgecqr vlemfdwnla qasshlldpy satrqkw
//
LOCUS       XP_041323612            1041 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323612
VERSION     XP_041323612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1041
                     /product="activated CDC42 kinase 1 isoform X6"
                     /calculated_mol_wt=116257
     Region          <22..67
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          127..384
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(129..131,137,153,155,202..205,209,249,253..254,256,
                     267,286..290,299,333)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(129..131,137,153,155,202..205,209,249,253..254,256,
                     267)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(249,253,286..290,299,333)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(266..276,278..292)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          390..438
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          446..511
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <563..803
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          783..854
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     Region          962..1005
                     /region_name="UBA_ACK1"
                     /note="UBA domain found in activated Cdc42 kinase 1 (ACK1)
                     and similar proteins; cd14274"
                     /db_xref="CDD:270460"
     Region          992..1031
                     /region_name="UBA_TNK1"
                     /note="UBA domain found in non-receptor tyrosine-protein
                     kinase TNK1 and similar proteins; cd14328"
                     /db_xref="CDD:270513"
     CDS             1..1041
                     /gene="TNK2"
                     /coded_by="XM_041467678.1:513..3638"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mqaeegtdwl lelltelqlq qyflrirdel nvtrlshfey vknedlekig mgrpgqrrlw
       61 eavkrrkamc krkswmskvf sgkrpeselp pqpqstfrkp ptppppeagg qhsltclvre
      121 rdlsifeklg dgsfgvvrrg ewctpagktl nvavkclktd vlsqpealdd firevnamhs
      181 ldhrnlirly gvvlshpmkm vtelaplgsl ldrlrknqgh flistlcqya iqvakgmayl
      241 eskrfihrdl aarnillasn elvkigdfgl mralpknddh yvmqehrkvp fawcapeslk
      301 trtfshasdt wmfgvtlwem ftygqepwig lngsqilhki dkegerlprp edcpqdiynv
      361 mlqcwahkpe drptfvalrd flveaqptdm ralqdfeepd klhiqmndii tviegraeny
      421 wwrgqnkrtl kvgqfprntv tsvaglsahd isqplknsfi htghgdtnpq hcwgfpdkid
      481 elylgnpldp pdilgvdasa arptqlpgra krqppprppq ptvlltkpcy dpvseeeegl
      541 pgglrklclk kpgtgkglrp vkpsarvpgt kvgerqpgrl asegpassev tlidfgeevp
      601 qgspspvgdl tapslaklam eafslldktp pqsptralpr plhptpvvdw dsrplppppa
      661 yddvaqdedd ievcsitspp srrgktnygf vdegergpal ednlflppke tkqpsmtqtt
      721 elfeelqqec mkrlnvplgp aapaddkpqi pprvpipprp lrrnepgrws gdlspasgge
      781 edrppqippr dplsqptsrt pspmalqvgs pqqraalcsc lstspgkpmp ttqsfaldpk
      841 yatpkviqaq gkdcskgpci lpivkdgqkv ssthyyllpe rpayldkyek ffkeakspee
      901 vaasrqvtta tvrpmvqqpl sdckanfssn nsnpgpkclv kascslqkiv ydgpdvcrpa
      961 dkirlvqdtv hgvtteecqa alqshgwstq raiqylkveq lfclglksrg ecqrvlemfd
     1021 wnlaqasshl ldpysatrqk w
//
LOCUS       XP_041323613            1041 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323613
VERSION     XP_041323613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1041
                     /product="activated CDC42 kinase 1 isoform X6"
                     /calculated_mol_wt=116257
     Region          <22..67
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          127..384
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(129..131,137,153,155,202..205,209,249,253..254,256,
                     267,286..290,299,333)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(129..131,137,153,155,202..205,209,249,253..254,256,
                     267)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(249,253,286..290,299,333)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(266..276,278..292)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          390..438
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          446..511
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <563..803
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          783..854
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     Region          962..1005
                     /region_name="UBA_ACK1"
                     /note="UBA domain found in activated Cdc42 kinase 1 (ACK1)
                     and similar proteins; cd14274"
                     /db_xref="CDD:270460"
     Region          992..1031
                     /region_name="UBA_TNK1"
                     /note="UBA domain found in non-receptor tyrosine-protein
                     kinase TNK1 and similar proteins; cd14328"
                     /db_xref="CDD:270513"
     CDS             1..1041
                     /gene="TNK2"
                     /coded_by="XM_041467679.1:516..3641"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mqaeegtdwl lelltelqlq qyflrirdel nvtrlshfey vknedlekig mgrpgqrrlw
       61 eavkrrkamc krkswmskvf sgkrpeselp pqpqstfrkp ptppppeagg qhsltclvre
      121 rdlsifeklg dgsfgvvrrg ewctpagktl nvavkclktd vlsqpealdd firevnamhs
      181 ldhrnlirly gvvlshpmkm vtelaplgsl ldrlrknqgh flistlcqya iqvakgmayl
      241 eskrfihrdl aarnillasn elvkigdfgl mralpknddh yvmqehrkvp fawcapeslk
      301 trtfshasdt wmfgvtlwem ftygqepwig lngsqilhki dkegerlprp edcpqdiynv
      361 mlqcwahkpe drptfvalrd flveaqptdm ralqdfeepd klhiqmndii tviegraeny
      421 wwrgqnkrtl kvgqfprntv tsvaglsahd isqplknsfi htghgdtnpq hcwgfpdkid
      481 elylgnpldp pdilgvdasa arptqlpgra krqppprppq ptvlltkpcy dpvseeeegl
      541 pgglrklclk kpgtgkglrp vkpsarvpgt kvgerqpgrl asegpassev tlidfgeevp
      601 qgspspvgdl tapslaklam eafslldktp pqsptralpr plhptpvvdw dsrplppppa
      661 yddvaqdedd ievcsitspp srrgktnygf vdegergpal ednlflppke tkqpsmtqtt
      721 elfeelqqec mkrlnvplgp aapaddkpqi pprvpipprp lrrnepgrws gdlspasgge
      781 edrppqippr dplsqptsrt pspmalqvgs pqqraalcsc lstspgkpmp ttqsfaldpk
      841 yatpkviqaq gkdcskgpci lpivkdgqkv ssthyyllpe rpayldkyek ffkeakspee
      901 vaasrqvtta tvrpmvqqpl sdckanfssn nsnpgpkclv kascslqkiv ydgpdvcrpa
      961 dkirlvqdtv hgvtteecqa alqshgwstq raiqylkveq lfclglksrg ecqrvlemfd
     1021 wnlaqasshl ldpysatrqk w
//
LOCUS       XP_041323614            1041 aa            linear   VRT 06-MAY-2021
DEFINITION  activated CDC42 kinase 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323614
VERSION     XP_041323614.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467680.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1041
                     /product="activated CDC42 kinase 1 isoform X6"
                     /calculated_mol_wt=116257
     Region          <22..67
                     /region_name="SAM_TNK-like"
                     /note="SAM domain of TNK(ACK)-like non-receptor
                     tyrosine-protein kinases; cd09539"
                     /db_xref="CDD:188938"
     Region          127..384
                     /region_name="PTKc_Ack_like"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Activated Cdc42-associated kinase; cd05040"
                     /db_xref="CDD:270636"
     Site            order(129..131,137,153,155,202..205,209,249,253..254,256,
                     267,286..290,299,333)
                     /site_type="active"
                     /db_xref="CDD:270636"
     Site            order(129..131,137,153,155,202..205,209,249,253..254,256,
                     267)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270636"
     Site            order(249,253,286..290,299,333)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270636"
     Site            order(266..276,278..292)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270636"
     Region          390..438
                     /region_name="SH3"
                     /note="Src homology 3 domains; smart00326"
                     /db_xref="CDD:214620"
     Region          446..511
                     /region_name="GTPase_binding"
                     /note="GTPase binding; pfam09027"
                     /db_xref="CDD:430374"
     Region          <563..803
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          783..854
                     /region_name="Inhibitor_Mig-6"
                     /note="EGFR receptor inhibitor Mig-6; pfam11555"
                     /db_xref="CDD:463294"
     Region          962..1005
                     /region_name="UBA_ACK1"
                     /note="UBA domain found in activated Cdc42 kinase 1 (ACK1)
                     and similar proteins; cd14274"
                     /db_xref="CDD:270460"
     Region          992..1031
                     /region_name="UBA_TNK1"
                     /note="UBA domain found in non-receptor tyrosine-protein
                     kinase TNK1 and similar proteins; cd14328"
                     /db_xref="CDD:270513"
     CDS             1..1041
                     /gene="TNK2"
                     /coded_by="XM_041467680.1:129..3254"
                     /db_xref="GeneID:121353657"
ORIGIN      
        1 mqaeegtdwl lelltelqlq qyflrirdel nvtrlshfey vknedlekig mgrpgqrrlw
       61 eavkrrkamc krkswmskvf sgkrpeselp pqpqstfrkp ptppppeagg qhsltclvre
      121 rdlsifeklg dgsfgvvrrg ewctpagktl nvavkclktd vlsqpealdd firevnamhs
      181 ldhrnlirly gvvlshpmkm vtelaplgsl ldrlrknqgh flistlcqya iqvakgmayl
      241 eskrfihrdl aarnillasn elvkigdfgl mralpknddh yvmqehrkvp fawcapeslk
      301 trtfshasdt wmfgvtlwem ftygqepwig lngsqilhki dkegerlprp edcpqdiynv
      361 mlqcwahkpe drptfvalrd flveaqptdm ralqdfeepd klhiqmndii tviegraeny
      421 wwrgqnkrtl kvgqfprntv tsvaglsahd isqplknsfi htghgdtnpq hcwgfpdkid
      481 elylgnpldp pdilgvdasa arptqlpgra krqppprppq ptvlltkpcy dpvseeeegl
      541 pgglrklclk kpgtgkglrp vkpsarvpgt kvgerqpgrl asegpassev tlidfgeevp
      601 qgspspvgdl tapslaklam eafslldktp pqsptralpr plhptpvvdw dsrplppppa
      661 yddvaqdedd ievcsitspp srrgktnygf vdegergpal ednlflppke tkqpsmtqtt
      721 elfeelqqec mkrlnvplgp aapaddkpqi pprvpipprp lrrnepgrws gdlspasgge
      781 edrppqippr dplsqptsrt pspmalqvgs pqqraalcsc lstspgkpmp ttqsfaldpk
      841 yatpkviqaq gkdcskgpci lpivkdgqkv ssthyyllpe rpayldkyek ffkeakspee
      901 vaasrqvtta tvrpmvqqpl sdckanfssn nsnpgpkclv kascslqkiv ydgpdvcrpa
      961 dkirlvqdtv hgvtteecqa alqshgwstq raiqylkveq lfclglksrg ecqrvlemfd
     1021 wnlaqasshl ldpysatrqk w
//
LOCUS       XP_041323615            1100 aa            linear   VRT 06-MAY-2021
DEFINITION  mucin-4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323615
VERSION     XP_041323615.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467681.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1100
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1100
                     /product="mucin-4 isoform X1"
                     /calculated_mol_wt=120453
     Region          5..161
                     /region_name="NIDO"
                     /note="Extracellular domain of unknown function in nidogen
                     (entactin) and hypothetical proteins; smart00539"
                     /db_xref="CDD:214712"
     Region          160..280
                     /region_name="AMOP"
                     /note="AMOP domain; cl02758"
                     /db_xref="CDD:470667"
     Region          284..460
                     /region_name="VWD"
                     /note="von Willebrand factor (vWF) type D domain;
                     smart00216"
                     /db_xref="CDD:214566"
     Region          716..>745
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(716,719,734)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..1100
                     /gene="MUC4"
                     /coded_by="XM_041467681.1:183..3485"
                     /db_xref="GeneID:121353659"
ORIGIN      
        1 mvaafwddad fskgvgttwy qeystlsstq dpivqdveak iekylkipya akwtlkvtwe
       61 kapaypsrrd dtqtstyqav lstdgsrsfa lllyqdggmr wdytrlaaan vligfssgng
      121 yaqnneltqk ppavkyrpdq hsssgsdvrg lwiyrldsrs rvnyrlqcla wldtepapat
      181 wnsqlppcpc srpqaeldpr yhwsrgpadt svrmlrtasp spagagvrcl yqggsllegw
      241 qerawslpfh tatdteleaf dwccrrvgkp rfcarfaekr prvdcegyvp ptpagafgdp
      301 hittldglty tfnglgdfvl llasdaqtsf vlhgrtaqtg maqatnfvaf aaqyisnttt
      361 tvewilgsqd diqvllnnet iqfsysqelg devyyspgvl lvnassvtav fdgtiavsvs
      421 atsgilsvvc slpdwyrnst rgllgvwdhd paddfqmpng tsipvnssee eiysygmtwa
      481 vgkhslftqp pdspalsftp fflsrlrqkn esqyqlvasq crgskeciyd slstgnlalg
      541 latqsfaadf qqrktalnaf ppvitgdasi tafrtekvtr qyhalgagar fiphlsreln
      601 isengtliwe prgiapftis leavgsnnis allqlrftlc rcsrsqdcdy sntvtlress
      661 lqlaacrces gysgafcqdp pdpcsqgcfp gvgcdpfrgc gpcpagltgd gehcsdidec
      721 tqgtecpgns tctntvgsyl csclaseqge rpgcgsacgy hscpegycsn ggrchlhpit
      781 cvptctcppa ftdqhcvvag gdfqplpssg lprrsiqmri ktlqnataee vnstvsailn
      841 slevkafqsn tnitqmtdsd gftfvvvsef aydsrgtvir flneelpaai tgafngrrgq
      901 reagtgllfq rlhqdnitdl vkltvdelrd yfpcslygyk gyqlhymgti gfvcispckm
      961 gycqhggqcq hlpegptcsc lpfsiyspag lqcewlaisl aaflgillga lallcllfal
     1021 gclalrlcrq hrrrhqgake tlwrtrpfss lmmageqaep tgshslerhw klqlqaidps
     1081 lqiriqrphv mppsqspqqp
//
LOCUS       XP_041323616             987 aa            linear   VRT 06-MAY-2021
DEFINITION  mucin-4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323616
VERSION     XP_041323616.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467682.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..987
                     /product="mucin-4 isoform X2"
                     /calculated_mol_wt=107680
     Region          47..167
                     /region_name="AMOP"
                     /note="AMOP domain; cl02758"
                     /db_xref="CDD:470667"
     Region          171..347
                     /region_name="VWD"
                     /note="von Willebrand factor (vWF) type D domain;
                     smart00216"
                     /db_xref="CDD:214566"
     Region          603..630
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(603,606,621)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..987
                     /gene="MUC4"
                     /coded_by="XM_041467682.1:82..3045"
                     /db_xref="GeneID:121353659"
ORIGIN      
        1 mtlsgngyaq nneltqkppa vkyrpdqhss sgsdvrglwi yrldsrsrvn yrlqclawld
       61 tepapatwns qlppcpcsrp qaeldpryhw srgpadtsvr mlrtaspspa gagvrclyqg
      121 gsllegwqer awslpfhtat dteleafdwc crrvgkprfc arfaekrprv dcegyvpptp
      181 agafgdphit tldgltytfn glgdfvllla sdaqtsfvlh grtaqtgmaq atnfvafaaq
      241 yisnttttve wilgsqddiq vllnnetiqf sysqelgdev yyspgvllvn assvtavfdg
      301 tiavsvsats gilsvvcslp dwyrnstrgl lgvwdhdpad dfqmpngtsi pvnsseeeiy
      361 sygmtwavgk hslftqppds palsftpffl srlrqknesq yqlvasqcrg skeciydsls
      421 tgnlalglat qsfaadfqqr ktalnafppv itgdasitaf rtekvtrqyh algagarfip
      481 hlsrelnise ngtliweprg iapftislea vgsnnisall qlrftlcrcs rsqdcdysnt
      541 vtlresslql aacrcesgys gafcqdppdp csqgcfpgvg cdpfrgcgpc pagltgdgeh
      601 csdidectqg tecpgnstct ntvgsylcsc laseqgerpg cgsacgyhsc pegycsnggr
      661 chlhpitcvp tctcppaftd qhcvvaggdf qplpssglpr rsiqmriktl qnataeevns
      721 tvsailnsle vkafqsntni tqmtdsdgft fvvvsefayd srgtvirfln eelpaaitga
      781 fngrrgqrea gtgllfqrlh qdnitdlvkl tvdelrdyfp cslygykgyq lhymgtigfv
      841 cispckmgyc qhggqcqhlp egptcsclpf siyspaglqc ewlaislaaf lgillgalal
      901 lcllfalgcl alrlcrqhrr rhqgaketlw rtrpfsslmm ageqaeptgs hslerhwklq
      961 lqaidpslqi riqrphvmpp sqspqqp
//
LOCUS       XP_041323618             776 aa            linear   VRT 06-MAY-2021
DEFINITION  transferrin receptor protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323618
VERSION     XP_041323618.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467684.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="transferrin receptor protein 1"
                     /calculated_mol_wt=86360
     Region          209..389
                     /region_name="PA_TfR"
                     /note="Protease-associated domain containing proteins like
                     transferrin receptor (TfR). This group contains various PA
                     domain-containing proteins similar to human TfR1 and TfR2.
                     TfR1 and TfR2 are type II membrane proteins, belonging to
                     the peptidase M28 family; cd02128"
                     /db_xref="CDD:239043"
     Site            order(296,303..306,308,312..315,318,320..322)
                     /site_type="other"
                     /note="PA/protease-like domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239043"
     Site            order(313,319)
                     /site_type="other"
                     /note="PA/helical domain interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Site            order(318,321)
                     /site_type="other"
                     /note="Ca2+ binding [ion binding]"
                     /db_xref="CDD:239043"
     Site            order(322,324,328..329)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Region          397..626
                     /region_name="M28_TfR"
                     /note="M28 Zn-peptidase Transferrin Receptor family;
                     cd09848"
                     /db_xref="CDD:349946"
     Site            order(404,406,409,411..412,414,459,461,478,481..489)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349946"
     Region          653..765
                     /region_name="TFR_dimer"
                     /note="Transferrin receptor-like dimerization domain;
                     pfam04253"
                     /db_xref="CDD:461238"
     CDS             1..776
                     /gene="TFRC"
                     /coded_by="XM_041467684.1:1301..3631"
                     /db_xref="GeneID:121353660"
ORIGIN      
        1 mdharaaisn lfsgeptsyt rfsiarqtdg dnshvemnla adeeeggeig rpehlhasmp
       61 pprrngkslc fviiaavlll ligfligyls yrgrtqrvnr cldgsgncem tptasyfsdd
      121 gmeeeevpgp rilywpelrn mlssklsaah leaslrqreg knsfeagkve destasyihd
      181 qftsfrlddv wndehyvrlq dkgssknqvv ivedgeevle spdayvaysk sgtvagkpiy
      241 vnygrkedfq kirnmrvsmd gaiiifragk itlaekvana rkegavgalm ypgpsndrra
      301 dsyvpfghah lgtgdpftpg fpsfnhtqfp pvessglpqi pvqtisreaa arlfgkmdgd
      361 kclqewtadi mgckvtvsss skmtvkltvn nvivdrkiln ifgvikgfee pdryvvlgaq
      421 rdswgpgaak agvgtaille larvisdmvk nddykprrsi ifaswsagey gavgatewle
      481 gysttlhaka ftyinldtav lgskdikisa spllysllet tmkrvkdpan dldnlnsrvg
      541 ldwikkvvpl dldntaypfl aysgipvvsf gfydegdeya flgttedtla nlkrktdnly
      601 slmrtaaeva gqialrlthd helfldidry sdellsfqek lwhvnanvke lgltlnwlyf
      661 argdfqraad alrrdiensd renrivrral ndrvmkveyd flspylspkd tpfrhiffgr
      721 gkhtlnslle nleqlavnkt svdvnelkeq lalatwtikg aanalvgdiw ntdnei
//
LOCUS       XP_041323619             776 aa            linear   VRT 06-MAY-2021
DEFINITION  transferrin receptor protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323619
VERSION     XP_041323619.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467685.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="transferrin receptor protein 1"
                     /calculated_mol_wt=86360
     Region          209..389
                     /region_name="PA_TfR"
                     /note="Protease-associated domain containing proteins like
                     transferrin receptor (TfR). This group contains various PA
                     domain-containing proteins similar to human TfR1 and TfR2.
                     TfR1 and TfR2 are type II membrane proteins, belonging to
                     the peptidase M28 family; cd02128"
                     /db_xref="CDD:239043"
     Site            order(296,303..306,308,312..315,318,320..322)
                     /site_type="other"
                     /note="PA/protease-like domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239043"
     Site            order(313,319)
                     /site_type="other"
                     /note="PA/helical domain interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Site            order(318,321)
                     /site_type="other"
                     /note="Ca2+ binding [ion binding]"
                     /db_xref="CDD:239043"
     Site            order(322,324,328..329)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Region          397..626
                     /region_name="M28_TfR"
                     /note="M28 Zn-peptidase Transferrin Receptor family;
                     cd09848"
                     /db_xref="CDD:349946"
     Site            order(404,406,409,411..412,414,459,461,478,481..489)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349946"
     Region          653..765
                     /region_name="TFR_dimer"
                     /note="Transferrin receptor-like dimerization domain;
                     pfam04253"
                     /db_xref="CDD:461238"
     CDS             1..776
                     /gene="TFRC"
                     /coded_by="XM_041467685.1:224..2554"
                     /db_xref="GeneID:121353660"
ORIGIN      
        1 mdharaaisn lfsgeptsyt rfsiarqtdg dnshvemnla adeeeggeig rpehlhasmp
       61 pprrngkslc fviiaavlll ligfligyls yrgrtqrvnr cldgsgncem tptasyfsdd
      121 gmeeeevpgp rilywpelrn mlssklsaah leaslrqreg knsfeagkve destasyihd
      181 qftsfrlddv wndehyvrlq dkgssknqvv ivedgeevle spdayvaysk sgtvagkpiy
      241 vnygrkedfq kirnmrvsmd gaiiifragk itlaekvana rkegavgalm ypgpsndrra
      301 dsyvpfghah lgtgdpftpg fpsfnhtqfp pvessglpqi pvqtisreaa arlfgkmdgd
      361 kclqewtadi mgckvtvsss skmtvkltvn nvivdrkiln ifgvikgfee pdryvvlgaq
      421 rdswgpgaak agvgtaille larvisdmvk nddykprrsi ifaswsagey gavgatewle
      481 gysttlhaka ftyinldtav lgskdikisa spllysllet tmkrvkdpan dldnlnsrvg
      541 ldwikkvvpl dldntaypfl aysgipvvsf gfydegdeya flgttedtla nlkrktdnly
      601 slmrtaaeva gqialrlthd helfldidry sdellsfqek lwhvnanvke lgltlnwlyf
      661 argdfqraad alrrdiensd renrivrral ndrvmkveyd flspylspkd tpfrhiffgr
      721 gkhtlnslle nleqlavnkt svdvnelkeq lalatwtikg aanalvgdiw ntdnei
//
LOCUS       XP_041323620             776 aa            linear   VRT 06-MAY-2021
DEFINITION  transferrin receptor protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323620
VERSION     XP_041323620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="transferrin receptor protein 1"
                     /calculated_mol_wt=86360
     Region          209..389
                     /region_name="PA_TfR"
                     /note="Protease-associated domain containing proteins like
                     transferrin receptor (TfR). This group contains various PA
                     domain-containing proteins similar to human TfR1 and TfR2.
                     TfR1 and TfR2 are type II membrane proteins, belonging to
                     the peptidase M28 family; cd02128"
                     /db_xref="CDD:239043"
     Site            order(296,303..306,308,312..315,318,320..322)
                     /site_type="other"
                     /note="PA/protease-like domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239043"
     Site            order(313,319)
                     /site_type="other"
                     /note="PA/helical domain interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Site            order(318,321)
                     /site_type="other"
                     /note="Ca2+ binding [ion binding]"
                     /db_xref="CDD:239043"
     Site            order(322,324,328..329)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Region          397..626
                     /region_name="M28_TfR"
                     /note="M28 Zn-peptidase Transferrin Receptor family;
                     cd09848"
                     /db_xref="CDD:349946"
     Site            order(404,406,409,411..412,414,459,461,478,481..489)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349946"
     Region          653..765
                     /region_name="TFR_dimer"
                     /note="Transferrin receptor-like dimerization domain;
                     pfam04253"
                     /db_xref="CDD:461238"
     CDS             1..776
                     /gene="TFRC"
                     /coded_by="XM_041467686.1:376..2706"
                     /db_xref="GeneID:121353660"
ORIGIN      
        1 mdharaaisn lfsgeptsyt rfsiarqtdg dnshvemnla adeeeggeig rpehlhasmp
       61 pprrngkslc fviiaavlll ligfligyls yrgrtqrvnr cldgsgncem tptasyfsdd
      121 gmeeeevpgp rilywpelrn mlssklsaah leaslrqreg knsfeagkve destasyihd
      181 qftsfrlddv wndehyvrlq dkgssknqvv ivedgeevle spdayvaysk sgtvagkpiy
      241 vnygrkedfq kirnmrvsmd gaiiifragk itlaekvana rkegavgalm ypgpsndrra
      301 dsyvpfghah lgtgdpftpg fpsfnhtqfp pvessglpqi pvqtisreaa arlfgkmdgd
      361 kclqewtadi mgckvtvsss skmtvkltvn nvivdrkiln ifgvikgfee pdryvvlgaq
      421 rdswgpgaak agvgtaille larvisdmvk nddykprrsi ifaswsagey gavgatewle
      481 gysttlhaka ftyinldtav lgskdikisa spllysllet tmkrvkdpan dldnlnsrvg
      541 ldwikkvvpl dldntaypfl aysgipvvsf gfydegdeya flgttedtla nlkrktdnly
      601 slmrtaaeva gqialrlthd helfldidry sdellsfqek lwhvnanvke lgltlnwlyf
      661 argdfqraad alrrdiensd renrivrral ndrvmkveyd flspylspkd tpfrhiffgr
      721 gkhtlnslle nleqlavnkt svdvnelkeq lalatwtikg aanalvgdiw ntdnei
//
LOCUS       XP_041323621             776 aa            linear   VRT 06-MAY-2021
DEFINITION  transferrin receptor protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323621
VERSION     XP_041323621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="transferrin receptor protein 1"
                     /calculated_mol_wt=86360
     Region          209..389
                     /region_name="PA_TfR"
                     /note="Protease-associated domain containing proteins like
                     transferrin receptor (TfR). This group contains various PA
                     domain-containing proteins similar to human TfR1 and TfR2.
                     TfR1 and TfR2 are type II membrane proteins, belonging to
                     the peptidase M28 family; cd02128"
                     /db_xref="CDD:239043"
     Site            order(296,303..306,308,312..315,318,320..322)
                     /site_type="other"
                     /note="PA/protease-like domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:239043"
     Site            order(313,319)
                     /site_type="other"
                     /note="PA/helical domain interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Site            order(318,321)
                     /site_type="other"
                     /note="Ca2+ binding [ion binding]"
                     /db_xref="CDD:239043"
     Site            order(322,324,328..329)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239043"
     Region          397..626
                     /region_name="M28_TfR"
                     /note="M28 Zn-peptidase Transferrin Receptor family;
                     cd09848"
                     /db_xref="CDD:349946"
     Site            order(404,406,409,411..412,414,459,461,478,481..489)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349946"
     Region          653..765
                     /region_name="TFR_dimer"
                     /note="Transferrin receptor-like dimerization domain;
                     pfam04253"
                     /db_xref="CDD:461238"
     CDS             1..776
                     /gene="TFRC"
                     /coded_by="XM_041467687.1:252..2582"
                     /db_xref="GeneID:121353660"
ORIGIN      
        1 mdharaaisn lfsgeptsyt rfsiarqtdg dnshvemnla adeeeggeig rpehlhasmp
       61 pprrngkslc fviiaavlll ligfligyls yrgrtqrvnr cldgsgncem tptasyfsdd
      121 gmeeeevpgp rilywpelrn mlssklsaah leaslrqreg knsfeagkve destasyihd
      181 qftsfrlddv wndehyvrlq dkgssknqvv ivedgeevle spdayvaysk sgtvagkpiy
      241 vnygrkedfq kirnmrvsmd gaiiifragk itlaekvana rkegavgalm ypgpsndrra
      301 dsyvpfghah lgtgdpftpg fpsfnhtqfp pvessglpqi pvqtisreaa arlfgkmdgd
      361 kclqewtadi mgckvtvsss skmtvkltvn nvivdrkiln ifgvikgfee pdryvvlgaq
      421 rdswgpgaak agvgtaille larvisdmvk nddykprrsi ifaswsagey gavgatewle
      481 gysttlhaka ftyinldtav lgskdikisa spllysllet tmkrvkdpan dldnlnsrvg
      541 ldwikkvvpl dldntaypfl aysgipvvsf gfydegdeya flgttedtla nlkrktdnly
      601 slmrtaaeva gqialrlthd helfldidry sdellsfqek lwhvnanvke lgltlnwlyf
      661 argdfqraad alrrdiensd renrivrral ndrvmkveyd flspylspkd tpfrhiffgr
      721 gkhtlnslle nleqlavnkt svdvnelkeq lalatwtikg aanalvgdiw ntdnei
//
LOCUS       XP_041323622             339 aa            linear   VRT 06-MAY-2021
DEFINITION  organic solute transporter subunit alpha isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323622
VERSION     XP_041323622.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467688.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="organic solute transporter subunit alpha isoform
                     X1"
                     /calculated_mol_wt=37350
     Region          52..320
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..339
                     /gene="SLC51A"
                     /coded_by="XM_041467688.1:2323..3342"
                     /db_xref="GeneID:121353661"
ORIGIN      
        1 mdptweladd prfsrplvem lirnfsvpaa cfslpptsrq llhqldmaql iilglctimt
       61 llsvviyvee vsylfrkirc pikmktlcws ssaptvvsvv scfglwfprs mmvvematta
      121 yfavcfyllm lvmvegfggk eallstlkdv pmvvstgpcc cccpclprit msriklklmi
      181 lgtfqyalfk avavflglil atdgnynpad isaesvslwi ntlvgvsalf glwglgilfr
      241 qarlhlaeqn mqakftcfqi lllltalqpa ifsilanngs iacsppfssk arsqqmnvql
      301 lipqtfilav ltrmyyrkqd dkpgyqpvgf aatgadaka
//
LOCUS       XP_041323623             293 aa            linear   VRT 06-MAY-2021
DEFINITION  organic solute transporter subunit alpha isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323623
VERSION     XP_041323623.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467689.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..293
                     /product="organic solute transporter subunit alpha isoform
                     X2"
                     /calculated_mol_wt=32056
     Region          6..274
                     /region_name="Solute_trans_a"
                     /note="Organic solute transporter Ostalpha; pfam03619"
                     /db_xref="CDD:460991"
     CDS             1..293
                     /gene="SLC51A"
                     /coded_by="XM_041467689.1:97..978"
                     /db_xref="GeneID:121353661"
ORIGIN      
        1 maqliilglc timtllsvvi yveevsylfr kircpikmkt lcwsssaptv vsvvscfglw
       61 fprsmmvvem attayfavcf yllmlvmveg fggkeallst lkdvpmvvst gpcccccpcl
      121 pritmsrikl klmilgtfqy alfkavavfl glilatdgny npadisaesv slwintlvgv
      181 salfglwglg ilfrqarlhl aeqnmqakft cfqillllta lqpaifsila nngsiacspp
      241 fsskarsqqm nvqllipqtf ilavltrmyy rkqddkpgyq pvgfaatgad aka
//
LOCUS       XP_041323624             138 aa            linear   VRT 06-MAY-2021
DEFINITION  proline-rich transmembrane protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323624
VERSION     XP_041323624.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467690.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..138
                     /product="proline-rich transmembrane protein 1-like"
                     /calculated_mol_wt=14398
     CDS             1..138
                     /gene="LOC121353662"
                     /coded_by="XM_041467690.1:11..427"
                     /db_xref="GeneID:121353662"
ORIGIN      
        1 mvhavrappr prtlgkppra aplelrlrhp flpsappppp aaaagspdgp rpapgpalkg
       61 aapplyvtag vrtdrrtsgw mstgmdartg rltaeqrqap gptrctgdag cpalpksllp
      121 gqehlevkpr qireafpk
//
LOCUS       XP_041323625             373 aa            linear   VRT 06-MAY-2021
DEFINITION  WW domain-containing transcription regulator protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323625
VERSION     XP_041323625.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467691.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="WW domain-containing transcription regulator
                     protein 1"
                     /calculated_mol_wt=41326
     Region          111..142
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(127,138)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     CDS             1..373
                     /gene="WWTR1"
                     /coded_by="XM_041467691.1:96..1217"
                     /db_xref="GeneID:121353664"
ORIGIN      
        1 mnpaaaappp gqqvihvtqd ldtelealfn avmnprpssw rkkilpesff repdsgshsr
       61 qsstdsggpp prlppvhvrs hsspaslpga gaapqhghlr qrscdvtder plppgwemal
      121 tqtgqryfln hiekittwqd prkpmnqlln hvshhpaats tpapqrtmam sqpnlmmqpq
      181 ppsaalpqqs rppqpptlla tqqqqqklrl qriqmereri rmrqeellrq eaalcrqlpm
      241 dsesmvpvqt avntpamtqd mrpitnngsd pflnsgpyhs reqstdsglg lgcysipttp
      301 edflsnvdem dtgetiaqta mninpqqarf pdfldclpgt nvdlgtlese dlipilndve
      361 svlnknepfl twl
//
LOCUS       XP_041323626             981 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323626
VERSION     XP_041323626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..981
                     /product="polyhomeotic-like protein 3 isoform X1"
                     /calculated_mol_wt=105130
     Region          <227..559
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          912..980
                     /region_name="SAM_Ph1,2,3"
                     /note="SAM domain of Ph (polyhomeotic) proteins of
                     Polycomb group; cd09577"
                     /db_xref="CDD:188976"
     Site            order(930..931,965..966,969..970,973)
                     /site_type="other"
                     /note="oligomer interface EH [polypeptide binding]"
                     /db_xref="CDD:188976"
     Site            order(941..945,947..948,951..952,956,961)
                     /site_type="other"
                     /note="oligomer interface ML [polypeptide binding]"
                     /db_xref="CDD:188976"
     CDS             1..981
                     /gene="PHC3"
                     /coded_by="XM_041467692.1:67..3012"
                     /db_xref="GeneID:121353665"
ORIGIN      
        1 menepntttc sastttvttt stsrtplpqi svysgsdrha vqviqqalhr ppssaaqylq
       61 qmyaaqqqhl mlqtaalqqq hlsstqfqsl atvpqaslsg grqctsptgs vtqqssmsqt
      121 sinlstsptp aqiisrsqts nttsssitqq tmllgstspt lsasqaqmyl raqmliftpa
      181 ttvaavqsdi pvvsssssss cqsaatqvqn ltlrsqklgv lsssqngppk sssqtqslcp
      241 skaassskgs qpdpsesnrk gespapecrs tpatrtssih hlitpasysp lqphslvkhq
      301 qiplhspppk ishhqlilqq qqqvqpialq tppgqeppps qhclplpsha lppapssvqs
      361 hcspihihpp pltlsptpsq saqqsvvvsp ppshspsqsp tiiihpqali qsqasslvpa
      421 alqpepaapq aaaanpvrps qplslpqhlp lppspavhig aveppslvsp gqqlvsstph
      481 qqypalqsap iplaappqls asstqiqplp lqsvqslqvq peilsqgqvl vqntlvseee
      541 lpaaealvql pfqtlpppqt vavnlqvqps vpietpviyq venvceeemp edsdcvhmar
      601 tptpptlspp aitlgngeal nsedplsehg glpsvtssvs asvikspsdp shasippppl
      661 llpaattrsn stsmpnsips lenkppqaiv kpqilthvie gfviqeglep fpvsrssllv
      721 eqpaekrllv egqimsvvcv esdlqntkha dnssdteied miaeegldei endllkcefc
      781 gkmgypnkfl rskrfcstsc akrhslsctk kfglfpsdkt srwnrksdsq slgrrgrrps
      841 gpegasrdhf lrqlpityps aeedlaphed avptamttrl rrqsererer elrelrmrkm
      901 pesidllpvv qtdpsvwtvd evwafihslp gcqdiadefr aqeidgqall llkedhlmsa
      961 mniklgpalk icarinslke s
//
LOCUS       XP_041323627             970 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323627
VERSION     XP_041323627.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467693.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..970
                     /product="polyhomeotic-like protein 3 isoform X2"
                     /calculated_mol_wt=104020
     Region          <216..548
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          901..969
                     /region_name="SAM_Ph1,2,3"
                     /note="SAM domain of Ph (polyhomeotic) proteins of
                     Polycomb group; cd09577"
                     /db_xref="CDD:188976"
     Site            order(919..920,954..955,958..959,962)
                     /site_type="other"
                     /note="oligomer interface EH [polypeptide binding]"
                     /db_xref="CDD:188976"
     Site            order(930..934,936..937,940..941,945,950)
                     /site_type="other"
                     /note="oligomer interface ML [polypeptide binding]"
                     /db_xref="CDD:188976"
     CDS             1..970
                     /gene="PHC3"
                     /coded_by="XM_041467693.1:67..2979"
                     /db_xref="GeneID:121353665"
ORIGIN      
        1 menepntttc sastttvttt stsrtplpqi svysgsdrha vqviqqalhr ppssaaqylq
       61 qmyaaqqqhl mlqtaalqqq hlsstqfqsl atvpqaslsg grqctsptgs vtqqssmsqt
      121 siisrsqtsn ttsssitqqt mllgstsptl sasqaqmylr aqmliftpat tvaavqsdip
      181 vvsssssssc qsaatqvqnl tlrsqklgvl sssqngppks ssqtqslcps kaassskgsq
      241 pdpsesnrkg espapecrst patrtssihh litpasyspl qphslvkhqq iplhspppki
      301 shhqlilqqq qqvqpialqt ppgqepppsq hclplpshal ppapssvqsh cspihihppp
      361 ltlsptpsqs aqqsvvvspp pshspsqspt iiihpqaliq sqasslvpaa lqpepaapqa
      421 aaanpvrpsq plslpqhlpl ppspavhiga veppslvspg qqlvsstphq qypalqsapi
      481 plaappqlsa sstqiqplpl qsvqslqvqp eilsqgqvlv qntlvseeel paaealvqlp
      541 fqtlpppqtv avnlqvqpsv pietpviyqv envceeempe dsdcvhmart ptpptlsppa
      601 itlgngealn sedplsehgg lpsvtssvsa svikspsdps hasippppll lpaattrsns
      661 tsmpnsipsl enkppqaivk pqilthvieg fviqeglepf pvsrssllve qpaekrllve
      721 gqimsvvcve sdlqntkhad nssdteiedm iaeegldeie ndllkcefcg kmgypnkflr
      781 skrfcstsca krhslsctkk fglfpsdkts rwnrksdsqs lgrrgrrpsg pegasrdhfl
      841 rqlpitypsa eedlapheda vptamttrlr rqsererere lrelrmrkmp esidllpvvq
      901 tdpsvwtvde vwafihslpg cqdiadefra qeidgqalll lkedhlmsam niklgpalki
      961 carinslkes
//
LOCUS       XP_041323628             935 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323628
VERSION     XP_041323628.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467694.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..935
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..935
                     /product="polyhomeotic-like protein 3 isoform X3"
                     /calculated_mol_wt=100048
     Region          <227..559
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          912..>930
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     CDS             1..935
                     /gene="PHC3"
                     /coded_by="XM_041467694.1:67..2874"
                     /db_xref="GeneID:121353665"
ORIGIN      
        1 menepntttc sastttvttt stsrtplpqi svysgsdrha vqviqqalhr ppssaaqylq
       61 qmyaaqqqhl mlqtaalqqq hlsstqfqsl atvpqaslsg grqctsptgs vtqqssmsqt
      121 sinlstsptp aqiisrsqts nttsssitqq tmllgstspt lsasqaqmyl raqmliftpa
      181 ttvaavqsdi pvvsssssss cqsaatqvqn ltlrsqklgv lsssqngppk sssqtqslcp
      241 skaassskgs qpdpsesnrk gespapecrs tpatrtssih hlitpasysp lqphslvkhq
      301 qiplhspppk ishhqlilqq qqqvqpialq tppgqeppps qhclplpsha lppapssvqs
      361 hcspihihpp pltlsptpsq saqqsvvvsp ppshspsqsp tiiihpqali qsqasslvpa
      421 alqpepaapq aaaanpvrps qplslpqhlp lppspavhig aveppslvsp gqqlvsstph
      481 qqypalqsap iplaappqls asstqiqplp lqsvqslqvq peilsqgqvl vqntlvseee
      541 lpaaealvql pfqtlpppqt vavnlqvqps vpietpviyq venvceeemp edsdcvhmar
      601 tptpptlspp aitlgngeal nsedplsehg glpsvtssvs asvikspsdp shasippppl
      661 llpaattrsn stsmpnsips lenkppqaiv kpqilthvie gfviqeglep fpvsrssllv
      721 eqpaekrllv egqimsvvcv esdlqntkha dnssdteied miaeegldei endllkcefc
      781 gkmgypnkfl rskrfcstsc akrhslsctk kfglfpsdkt srwnrksdsq slgrrgrrps
      841 gpegasrdhf lrqlpityps aeedlaphed avptamttrl rrqsererer elrelrmrkm
      901 pesidllpvv qtdpsvwtvd evwafihslp aqipc
//
LOCUS       XP_041323630             928 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323630
VERSION     XP_041323630.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467696.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..928
                     /product="polyhomeotic-like protein 3 isoform X4"
                     /calculated_mol_wt=99202
     Region          <174..506
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          859..927
                     /region_name="SAM_Ph1,2,3"
                     /note="SAM domain of Ph (polyhomeotic) proteins of
                     Polycomb group; cd09577"
                     /db_xref="CDD:188976"
     Site            order(877..878,912..913,916..917,920)
                     /site_type="other"
                     /note="oligomer interface EH [polypeptide binding]"
                     /db_xref="CDD:188976"
     Site            order(888..892,894..895,898..899,903,908)
                     /site_type="other"
                     /note="oligomer interface ML [polypeptide binding]"
                     /db_xref="CDD:188976"
     CDS             1..928
                     /gene="PHC3"
                     /coded_by="XM_041467696.1:67..2853"
                     /db_xref="GeneID:121353665"
ORIGIN      
        1 menepntttc sastttvttt stsrtplpqi svysgsdrha vqaslsggrq ctsptgsvtq
       61 qssmsqtsin lstsptpaqi isrsqtsntt sssitqqtml lgstsptlsa sqaqmylraq
      121 mliftpattv aavqsdipvv ssssssscqs aatqvqnltl rsqklgvlss sqngppksss
      181 qtqslcpska assskgsqpd psesnrkges papecrstpa trtssihhli tpasysplqp
      241 hslvkhqqip lhspppkish hqlilqqqqq vqpialqtpp gqepppsqhc lplpshalpp
      301 apssvqshcs pihihppplt lsptpsqsaq qsvvvsppps hspsqsptii ihpqaliqsq
      361 asslvpaalq pepaapqaaa anpvrpsqpl slpqhlplpp spavhigave ppslvspgqq
      421 lvsstphqqy palqsapipl aappqlsass tqiqplplqs vqslqvqpei lsqgqvlvqn
      481 tlvseeelpa aealvqlpfq tlpppqtvav nlqvqpsvpi etpviyqven vceeempeds
      541 dcvhmartpt pptlsppait lgngealnse dplsehgglp svtssvsasv ikspsdpsha
      601 sipppplllp aattrsnsts mpnsipslen kppqaivkpq ilthviegfv iqeglepfpv
      661 srssllveqp aekrllvegq imsvvcvesd lqntkhadns sdteiedmia eegldeiend
      721 llkcefcgkm gypnkflrsk rfcstscakr hslsctkkfg lfpsdktsrw nrksdsqslg
      781 rrgrrpsgpe gasrdhflrq lpitypsaee dlaphedavp tamttrlrrq serererelr
      841 elrmrkmpes idllpvvqtd psvwtvdevw afihslpgcq diadefraqe idgqallllk
      901 edhlmsamni klgpalkica rinslkes
//
LOCUS       XP_041323631             917 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 3 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323631
VERSION     XP_041323631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..917
                     /product="polyhomeotic-like protein 3 isoform X5"
                     /calculated_mol_wt=98092
     Region          <163..495
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          848..916
                     /region_name="SAM_Ph1,2,3"
                     /note="SAM domain of Ph (polyhomeotic) proteins of
                     Polycomb group; cd09577"
                     /db_xref="CDD:188976"
     Site            order(866..867,901..902,905..906,909)
                     /site_type="other"
                     /note="oligomer interface EH [polypeptide binding]"
                     /db_xref="CDD:188976"
     Site            order(877..881,883..884,887..888,892,897)
                     /site_type="other"
                     /note="oligomer interface ML [polypeptide binding]"
                     /db_xref="CDD:188976"
     CDS             1..917
                     /gene="PHC3"
                     /coded_by="XM_041467697.1:67..2820"
                     /db_xref="GeneID:121353665"
ORIGIN      
        1 menepntttc sastttvttt stsrtplpqi svysgsdrha vqaslsggrq ctsptgsvtq
       61 qssmsqtsii srsqtsntts ssitqqtmll gstsptlsas qaqmylraqm liftpattva
      121 avqsdipvvs sssssscqsa atqvqnltlr sqklgvlsss qngppksssq tqslcpskaa
      181 ssskgsqpdp sesnrkgesp apecrstpat rtssihhlit pasysplqph slvkhqqipl
      241 hspppkishh qlilqqqqqv qpialqtppg qepppsqhcl plpshalppa pssvqshcsp
      301 ihihpppltl sptpsqsaqq svvvspppsh spsqsptiii hpqaliqsqa sslvpaalqp
      361 epaapqaaaa npvrpsqpls lpqhlplpps pavhigavep pslvspgqql vsstphqqyp
      421 alqsapipla appqlsasst qiqplplqsv qslqvqpeil sqgqvlvqnt lvseeelpaa
      481 ealvqlpfqt lpppqtvavn lqvqpsvpie tpviyqvenv ceeempedsd cvhmartptp
      541 ptlsppaitl gngealnsed plsehgglps vtssvsasvi kspsdpshas ipppplllpa
      601 attrsnstsm pnsipslenk ppqaivkpqi lthviegfvi qeglepfpvs rssllveqpa
      661 ekrllvegqi msvvcvesdl qntkhadnss dteiedmiae egldeiendl lkcefcgkmg
      721 ypnkflrskr fcstscakrh slsctkkfgl fpsdktsrwn rksdsqslgr rgrrpsgpeg
      781 asrdhflrql pitypsaeed laphedavpt amttrlrrqs erererelre lrmrkmpesi
      841 dllpvvqtdp svwtvdevwa fihslpgcqd iadefraqei dgqallllke dhlmsamnik
      901 lgpalkicar inslkes
//
LOCUS       XP_041323632             825 aa            linear   VRT 06-MAY-2021
DEFINITION  polyhomeotic-like protein 3 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323632
VERSION     XP_041323632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..825
                     /product="polyhomeotic-like protein 3 isoform X6"
                     /calculated_mol_wt=87552
     Region          <227..559
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..825
                     /gene="PHC3"
                     /coded_by="XM_041467698.1:67..2544"
                     /db_xref="GeneID:121353665"
ORIGIN      
        1 menepntttc sastttvttt stsrtplpqi svysgsdrha vqviqqalhr ppssaaqylq
       61 qmyaaqqqhl mlqtaalqqq hlsstqfqsl atvpqaslsg grqctsptgs vtqqssmsqt
      121 sinlstsptp aqiisrsqts nttsssitqq tmllgstspt lsasqaqmyl raqmliftpa
      181 ttvaavqsdi pvvsssssss cqsaatqvqn ltlrsqklgv lsssqngppk sssqtqslcp
      241 skaassskgs qpdpsesnrk gespapecrs tpatrtssih hlitpasysp lqphslvkhq
      301 qiplhspppk ishhqlilqq qqqvqpialq tppgqeppps qhclplpsha lppapssvqs
      361 hcspihihpp pltlsptpsq saqqsvvvsp ppshspsqsp tiiihpqali qsqasslvpa
      421 alqpepaapq aaaanpvrps qplslpqhlp lppspavhig aveppslvsp gqqlvsstph
      481 qqypalqsap iplaappqls asstqiqplp lqsvqslqvq peilsqgqvl vqntlvseee
      541 lpaaealvql pfqtlpppqt vavnlqvqps vpietpviyq venvceeemp edsdcvhmar
      601 tptpptlspp aitlgngeal nsedplsehg glpsvtssvs asvikspsdp shasippppl
      661 llpaattrsn stsmpnsips lenkppqaiv kpqilthvie gfviqeglep fpvsrssllv
      721 eqpaekrllv egqimsvvcv esdlqntkha dnssdteied miaeegldei endllkcefc
      781 gkmgypnkfl rskrfcstsc aksfqllihl qkkiwllmkt lfrrp
//
LOCUS       XP_041323633             340 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor 160 [Pyrgilauda ruficollis].
ACCESSION   XP_041323633
VERSION     XP_041323633.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467699.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="probable G-protein coupled receptor 160"
                     /calculated_mol_wt=38408
     CDS             1..340
                     /gene="GPR160"
                     /coded_by="XM_041467699.1:312..1334"
                     /db_xref="GeneID:121353666"
ORIGIN      
        1 maarpcengs aqhhcthasq rleisymlvl imlgkvfldf fmlqikprpv kvsfmgyfcv
       61 svalldftll lsmcfifcfe dfvlwgvrft eyhiclftqi tsltygilpy pvylvaaldy
      121 yttvsrtsqv ptrgrkllyg favvviwisg ffctlqvpav seelqmqksv spsqcplsgs
      181 wqsssvswam vlllgtalla gwkevttmll sarllsfssq pvlmfpyvpn nnnntcfkwq
      241 llsrlllcfl gtwapfvvlq vvvvllgvqi payvemnvpw lcfinsflla aaywcrchdv
      301 elteegwctd pfvswkfcfm pfnnestqpa dkpgtvivic
//
LOCUS       XP_041323634             340 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor 160 [Pyrgilauda ruficollis].
ACCESSION   XP_041323634
VERSION     XP_041323634.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467700.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="probable G-protein coupled receptor 160"
                     /calculated_mol_wt=38408
     CDS             1..340
                     /gene="GPR160"
                     /coded_by="XM_041467700.1:527..1549"
                     /db_xref="GeneID:121353666"
ORIGIN      
        1 maarpcengs aqhhcthasq rleisymlvl imlgkvfldf fmlqikprpv kvsfmgyfcv
       61 svalldftll lsmcfifcfe dfvlwgvrft eyhiclftqi tsltygilpy pvylvaaldy
      121 yttvsrtsqv ptrgrkllyg favvviwisg ffctlqvpav seelqmqksv spsqcplsgs
      181 wqsssvswam vlllgtalla gwkevttmll sarllsfssq pvlmfpyvpn nnnntcfkwq
      241 llsrlllcfl gtwapfvvlq vvvvllgvqi payvemnvpw lcfinsflla aaywcrchdv
      301 elteegwctd pfvswkfcfm pfnnestqpa dkpgtvivic
//
LOCUS       XP_041323635             340 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor 160 [Pyrgilauda ruficollis].
ACCESSION   XP_041323635
VERSION     XP_041323635.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467701.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="probable G-protein coupled receptor 160"
                     /calculated_mol_wt=38408
     CDS             1..340
                     /gene="GPR160"
                     /coded_by="XM_041467701.1:916..1938"
                     /db_xref="GeneID:121353666"
ORIGIN      
        1 maarpcengs aqhhcthasq rleisymlvl imlgkvfldf fmlqikprpv kvsfmgyfcv
       61 svalldftll lsmcfifcfe dfvlwgvrft eyhiclftqi tsltygilpy pvylvaaldy
      121 yttvsrtsqv ptrgrkllyg favvviwisg ffctlqvpav seelqmqksv spsqcplsgs
      181 wqsssvswam vlllgtalla gwkevttmll sarllsfssq pvlmfpyvpn nnnntcfkwq
      241 llsrlllcfl gtwapfvvlq vvvvllgvqi payvemnvpw lcfinsflla aaywcrchdv
      301 elteegwctd pfvswkfcfm pfnnestqpa dkpgtvivic
//
LOCUS       XP_041323636             126 aa            linear   VRT 06-MAY-2021
DEFINITION  C-type natriuretic peptide [Pyrgilauda ruficollis].
ACCESSION   XP_041323636
VERSION     XP_041323636.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467702.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..126
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..126
                     /product="C-type natriuretic peptide"
                     /calculated_mol_wt=12820
     Region          96..126
                     /region_name="ANP"
                     /note="Atrial natriuretic peptide; pfam00212"
                     /db_xref="CDD:459713"
     CDS             1..126
                     /gene="NPPC"
                     /coded_by="XM_041467702.1:1..381"
                     /db_xref="GeneID:121353667"
ORIGIN      
        1 mqispllagg lllallsvrl eakpasqlpq kasrgsaaaa aaaaagppea aerekereke
       61 rsgggggsgp rearearaea rpragwarll qdppgrrhkg lhkkglgkgc fglkldriga
      121 msglgc
//
LOCUS       XP_041323637             264 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 7b isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323637
VERSION     XP_041323637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..264
                     /product="COP9 signalosome complex subunit 7b isoform X1"
                     /calculated_mol_wt=29763
     Region          88..177
                     /region_name="PINT"
                     /note="motif in proteasome subunits, Int-6, Nip-1 and
                     TRIP-15; smart00088"
                     /db_xref="CDD:214509"
     Region          166..215
                     /region_name="CSN7a_helixI"
                     /note="COP9 signalosome complex subunit 7a helix I domain;
                     pfam18392"
                     /db_xref="CDD:465740"
     CDS             1..264
                     /gene="COPS7B"
                     /coded_by="XM_041467703.1:104..898"
                     /db_xref="GeneID:121353668"
ORIGIN      
        1 mageqkpscn lleqfillak gtsgsaltal inqvleapgv yvfgellelt nvkelaegsn
       61 aayfqllnlf aygtyrdyva nkdnlpeltv tqknklkhlt ivslasrmkc ipysvllkdl
      121 dmrnlreled liieavytdi iqgkldqrnq vlevdfcigr diqkkdisni vktlqewcdg
      181 ceavllgieq qvlranqyke nhhrtqqqve mevtnikktl katasssaqe meqqlverec
      241 pphteqrqpt kkmskvkglv ssrh
//
LOCUS       XP_041323638             214 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 7b isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323638
VERSION     XP_041323638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467704.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..214
                     /product="COP9 signalosome complex subunit 7b isoform X2"
                     /calculated_mol_wt=24153
     Region          88..177
                     /region_name="PINT"
                     /note="motif in proteasome subunits, Int-6, Nip-1 and
                     TRIP-15; smart00088"
                     /db_xref="CDD:214509"
     Region          166..212
                     /region_name="CSN7a_helixI"
                     /note="COP9 signalosome complex subunit 7a helix I domain;
                     pfam18392"
                     /db_xref="CDD:465740"
     CDS             1..214
                     /gene="COPS7B"
                     /coded_by="XM_041467704.1:104..748"
                     /db_xref="GeneID:121353668"
ORIGIN      
        1 mageqkpscn lleqfillak gtsgsaltal inqvleapgv yvfgellelt nvkelaegsn
       61 aayfqllnlf aygtyrdyva nkdnlpeltv tqknklkhlt ivslasrmkc ipysvllkdl
      121 dmrnlreled liieavytdi iqgkldqrnq vlevdfcigr diqkkdisni vktlqewcdg
      181 ceavllgieq qvlranqyke nhhrtqqqve mesf
//
LOCUS       XP_041323639             770 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323639
VERSION     XP_041323639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="TSC22 domain family protein 2 isoform X1"
                     /calculated_mol_wt=78933
     Region          <80..336
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          256..>493
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          <444..584
                     /region_name="PRK10672"
                     /note="endolytic peptidoglycan transglycosylase RlpA"
                     /db_xref="CDD:236733"
     Region          695..747
                     /region_name="ZIP_TSC22D-like"
                     /note="leucine zipper found in the TSC22 domain leucine
                     zipper transcription factors, c-Myc-binding protein, and
                     similar proteins; cl40461"
                     /db_xref="CDD:424092"
     Site            order(709,711..712,714..719,721..722,724..725,728..729,
                     731..732,735..736,738..739,742..743)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409275"
     CDS             1..770
                     /gene="TSC22D2"
                     /coded_by="XM_041467705.1:332..2644"
                     /db_xref="GeneID:121353670"
ORIGIN      
        1 mskmpakkks cfqitsvtta qvassitedt eslddpdesr tedvsseifd vsratdygpe
       61 dvcersssee tlnnvgeaet pssvspnlvl dgqlavaapg maagpnggav pkssavplpa
      121 vapgtavagg ssaqaslpst gpsapsapga msqtaaaacs srfrvikldh gtgepyrrgr
      181 wtcmeyydrd sdgggvlgrt gdcirhsstf eqaaqerdsg lgatggsvvi savpasahgp
      241 dsiadsslaa vsqllqtekm nqsslqqpnf vigqqqqpvg gavpqstaqp vfsgasgasq
      301 qmivpqqpqv npqgvsqagp ngkgmappnv tagqsgipva qqqvqqanip vtqpqqfays
      361 qsqippvhll ptqppgqaey mqhmtimqsq gaiqqaatss apstvasslp vgqvtgqnps
      421 pvgapvmgvs aqpseavgqg sgllqsgqaq asqpalpqpg gvvqpglght gvvqqksvtq
      481 hpmggssqvs gmpgaphavv pgvqsvpavv pgtsvpsvst tasaampnvp vtlvqsqlts
      541 hpsvsrstgt vqsqhvghsm mqgaptapas lpqaslgqfq tqaqslvgqi ddtrrksepl
      601 pqpplsliae nkplvkppip dtlanplqlp astpmnslas svfgisipvd gdedrnpsta
      661 fyqafhfnkl heskttwdsa sgasvvaidn kieqamdlvk shlmyavree vevlkeqike
      721 lvernsller enallkslsn ndqlsqlssq qaapssssqa qppqpnvssa
//
LOCUS       XP_041323641             746 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323641
VERSION     XP_041323641.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467707.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..746
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..746
                     /product="TSC22 domain family protein 2 isoform X2"
                     /calculated_mol_wt=76025
     Region          <80..336
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          256..>493
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          <444..584
                     /region_name="PRK10672"
                     /note="endolytic peptidoglycan transglycosylase RlpA"
                     /db_xref="CDD:236733"
     Region          671..723
                     /region_name="ZIP_TSC22D-like"
                     /note="leucine zipper found in the TSC22 domain leucine
                     zipper transcription factors, c-Myc-binding protein, and
                     similar proteins; cl40461"
                     /db_xref="CDD:424092"
     Site            order(685,687..688,690..695,697..698,700..701,704..705,
                     707..708,711..712,714..715,718..719)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:409275"
     CDS             1..746
                     /gene="TSC22D2"
                     /coded_by="XM_041467707.1:332..2572"
                     /db_xref="GeneID:121353670"
ORIGIN      
        1 mskmpakkks cfqitsvtta qvassitedt eslddpdesr tedvsseifd vsratdygpe
       61 dvcersssee tlnnvgeaet pssvspnlvl dgqlavaapg maagpnggav pkssavplpa
      121 vapgtavagg ssaqaslpst gpsapsapga msqtaaaacs srfrvikldh gtgepyrrgr
      181 wtcmeyydrd sdgggvlgrt gdcirhsstf eqaaqerdsg lgatggsvvi savpasahgp
      241 dsiadsslaa vsqllqtekm nqsslqqpnf vigqqqqpvg gavpqstaqp vfsgasgasq
      301 qmivpqqpqv npqgvsqagp ngkgmappnv tagqsgipva qqqvqqanip vtqpqqfays
      361 qsqippvhll ptqppgqaey mqhmtimqsq gaiqqaatss apstvasslp vgqvtgqnps
      421 pvgapvmgvs aqpseavgqg sgllqsgqaq asqpalpqpg gvvqpglght gvvqqksvtq
      481 hpmggssqvs gmpgaphavv pgvqsvpavv pgtsvpsvst tasaampnvp vtlvqsqlts
      541 hpsvsrstgt vqsqhvghsm mqgaptapas lpqaslgqfq tqaqslvgqi ddtrrksepl
      601 pqpplsliae nkplvkppip dtlanplqlp astpmnslas svfgisipvd gdedsasgas
      661 vvaidnkieq amdlvkshlm yavreevevl keqikelver nsllerenal lkslsnndql
      721 sqlssqqaap ssssqaqppq pnvssa
//
LOCUS       XP_041323642             700 aa            linear   VRT 06-MAY-2021
DEFINITION  TSC22 domain family protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323642
VERSION     XP_041323642.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467708.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..700
                     /product="TSC22 domain family protein 2 isoform X3"
                     /calculated_mol_wt=71549
     Region          <80..336
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          256..>493
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          <444..584
                     /region_name="PRK10672"
                     /note="endolytic peptidoglycan transglycosylase RlpA"
                     /db_xref="CDD:236733"
     CDS             1..700
                     /gene="TSC22D2"
                     /coded_by="XM_041467708.1:332..2434"
                     /db_xref="GeneID:121353670"
ORIGIN      
        1 mskmpakkks cfqitsvtta qvassitedt eslddpdesr tedvsseifd vsratdygpe
       61 dvcersssee tlnnvgeaet pssvspnlvl dgqlavaapg maagpnggav pkssavplpa
      121 vapgtavagg ssaqaslpst gpsapsapga msqtaaaacs srfrvikldh gtgepyrrgr
      181 wtcmeyydrd sdgggvlgrt gdcirhsstf eqaaqerdsg lgatggsvvi savpasahgp
      241 dsiadsslaa vsqllqtekm nqsslqqpnf vigqqqqpvg gavpqstaqp vfsgasgasq
      301 qmivpqqpqv npqgvsqagp ngkgmappnv tagqsgipva qqqvqqanip vtqpqqfays
      361 qsqippvhll ptqppgqaey mqhmtimqsq gaiqqaatss apstvasslp vgqvtgqnps
      421 pvgapvmgvs aqpseavgqg sgllqsgqaq asqpalpqpg gvvqpglght gvvqqksvtq
      481 hpmggssqvs gmpgaphavv pgvqsvpavv pgtsvpsvst tasaampnvp vtlvqsqlts
      541 hpsvsrstgt vqsqhvghsm mqgaptapas lpqaslgqfq tqaqslvgqi ddtrrksepl
      601 pqpplsliae nkplvkppip dtlanplqlp astpmnslas svfgisipvd gdedrnpsta
      661 fyqafhfnkl heskttwdry gclsmeciha ecvwckccch
//
LOCUS       XP_041323643             586 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 2A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323643
VERSION     XP_041323643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..586
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..586
                     /product="eukaryotic translation initiation factor 2A
                     isoform X1"
                     /calculated_mol_wt=64588
     Region          9..572
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          216..414
                     /region_name="eIF2A"
                     /note="Eukaryotic translation initiation factor eIF2A;
                     pfam08662"
                     /db_xref="CDD:462552"
     Region          277..311
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          318..352
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..586
                     /gene="EIF2A"
                     /coded_by="XM_041467709.1:44..1804"
                     /db_xref="GeneID:121353671"
ORIGIN      
        1 mapptpllav rgseglymvn gppsftesaa fqrdsgknck avafskdgsl fawcngqkvn
       61 vvnvtraell hsfdlpktvc lefspknnvl atwqayatak dgtagvpnlq lhdlktgkcl
      121 ksfvqkkmqn wcpcwaddes icarnvnnev hffennnfnt ianklhlqkv sdfvlspgaq
      181 ptkvavyvpg skgapsfvrl yqypnfggpq salanksffk adkvtmlwnk katavlvvas
      241 tevdksgasy ygeqtlhyla asgesavvql pkngpiydva wspnsvefca vygfmpakat
      301 vfnlkcdpvf dfgtgprnaa yysphghilv lagfgnlrgq mevwdvknyk liskpvasds
      361 tyfawcpdge hivtatcapr lrvgngykiw hytgsvlhch evpadeemwq vfwqpfldgv
      421 fperavryqa vpselpraep rpaqayrppa lrnrpvtssk lhedeppqnm kpqlggsdkp
      481 mskialknqr kheakkaakq eakaeahqvp aqvrtpqnal qntvpamttg dpevdkkikn
      541 lkkklkaieq lkeqaaagkq leknqvekiq keaallkele dlelgv
//
LOCUS       XP_041323644             585 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 2A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323644
VERSION     XP_041323644.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467710.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..585
                     /product="eukaryotic translation initiation factor 2A
                     isoform X2"
                     /calculated_mol_wt=64545
     Region          7..571
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          215..413
                     /region_name="eIF2A"
                     /note="Eukaryotic translation initiation factor eIF2A;
                     pfam08662"
                     /db_xref="CDD:462552"
     Region          276..310
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          317..351
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..585
                     /gene="EIF2A"
                     /coded_by="XM_041467710.1:145..1902"
                     /db_xref="GeneID:121353671"
ORIGIN      
        1 msclfpvavr gseglymvng ppsftesaaf qrdsgkncka vafskdgslf awcngqkvnv
       61 vnvtraellh sfdlpktvcl efspknnvla twqayatakd gtagvpnlql hdlktgkclk
      121 sfvqkkmqnw cpcwaddesi carnvnnevh ffennnfnti anklhlqkvs dfvlspgaqp
      181 tkvavyvpgs kgapsfvrly qypnfggpqs alanksffka dkvtmlwnkk atavlvvast
      241 evdksgasyy geqtlhylaa sgesavvqlp kngpiydvaw spnsvefcav ygfmpakatv
      301 fnlkcdpvfd fgtgprnaay ysphghilvl agfgnlrgqm evwdvknykl iskpvasdst
      361 yfawcpdgeh ivtatcaprl rvgngykiwh ytgsvlhche vpadeemwqv fwqpfldgvf
      421 peravryqav pselpraepr paqayrppal rnrpvtsskl hedeppqnmk pqlggsdkpm
      481 skialknqrk heakkaakqe akaeahqvpa qvrtpqnalq ntvpamttgd pevdkkiknl
      541 kkklkaieql keqaaagkql eknqvekiqk eaallkeled lelgv
//
LOCUS       XP_041323645             569 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 2A isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323645
VERSION     XP_041323645.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467711.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="eukaryotic translation initiation factor 2A
                     isoform X3"
                     /calculated_mol_wt=62834
     Region          1..555
                     /region_name="COG5354"
                     /note="Uncharacterized protein, contains Trp-Asp (WD)
                     repeat [General function prediction only]"
                     /db_xref="CDD:227657"
     Region          199..397
                     /region_name="eIF2A"
                     /note="Eukaryotic translation initiation factor eIF2A;
                     pfam08662"
                     /db_xref="CDD:462552"
     Region          260..294
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          301..335
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..569
                     /gene="EIF2A"
                     /coded_by="XM_041467711.1:35..1744"
                     /db_xref="GeneID:121353671"
ORIGIN      
        1 mvngppsfte saafqrdsgk nckavafskd gslfawcngq kvnvvnvtra ellhsfdlpk
       61 tvclefspkn nvlatwqaya takdgtagvp nlqlhdlktg kclksfvqkk mqnwcpcwad
      121 desicarnvn nevhffennn fntianklhl qkvsdfvlsp gaqptkvavy vpgskgapsf
      181 vrlyqypnfg gpqsalanks ffkadkvtml wnkkatavlv vastevdksg asyygeqtlh
      241 ylaasgesav vqlpkngpiy dvawspnsve fcavygfmpa katvfnlkcd pvfdfgtgpr
      301 naayysphgh ilvlagfgnl rgqmevwdvk nykliskpva sdstyfawcp dgehivtatc
      361 aprlrvgngy kiwhytgsvl hchevpadee mwqvfwqpfl dgvfperavr yqavpselpr
      421 aeprpaqayr ppalrnrpvt ssklhedepp qnmkpqlggs dkpmskialk nqrkheakka
      481 akqeakaeah qvpaqvrtpq nalqntvpam ttgdpevdkk iknlkkklka ieqlkeqaaa
      541 gkqleknqve kiqkeaallk eledlelgv
//
LOCUS       XP_041323646              66 aa            linear   VRT 06-MAY-2021
DEFINITION  stress-associated endoplasmic reticulum protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323646
VERSION     XP_041323646.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467712.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..66
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..66
                     /product="stress-associated endoplasmic reticulum protein
                     1"
                     /calculated_mol_wt=7230
     Region          3..59
                     /region_name="RAMP4"
                     /note="Ribosome associated membrane protein RAMP4;
                     pfam06624"
                     /db_xref="CDD:461965"
     CDS             1..66
                     /gene="SERP1"
                     /coded_by="XM_041467712.1:78..278"
                     /db_xref="GeneID:121353672"
ORIGIN      
        1 mvakqrirma nekhsknitq rgnvaktsrt apeekasvgp wllalfifvv cgsaifqiiq
       61 sirmgm
//
LOCUS       XP_041323647             153 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 5A-2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323647
VERSION     XP_041323647.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467713.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..153
                     /product="eukaryotic translation initiation factor 5A-2"
                     /calculated_mol_wt=16576
     Region          1..150
                     /region_name="PLN03107"
                     /note="eukaryotic translation initiation factor 5A;
                     Provisional"
                     /db_xref="CDD:215580"
     CDS             1..153
                     /gene="EIF5A2"
                     /coded_by="XM_041467713.1:158..619"
                     /db_xref="GeneID:121353674"
ORIGIN      
        1 madeldfttg dagasstypm qcsalrkngf vvlkgrpcki vemstsktgk hghakvhlvg
       61 idiftgkkye dicpsthnmd vpnikrndyq ligiqdgyls lltesgevre dlklpegdlg
      121 keiegkfnan edvqisvisa mneecavaik pck
//
LOCUS       XP_041323648             153 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 5A-2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323648
VERSION     XP_041323648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..153
                     /product="eukaryotic translation initiation factor 5A-2"
                     /calculated_mol_wt=16576
     Region          1..150
                     /region_name="PLN03107"
                     /note="eukaryotic translation initiation factor 5A;
                     Provisional"
                     /db_xref="CDD:215580"
     CDS             1..153
                     /gene="EIF5A2"
                     /coded_by="XM_041467714.1:158..619"
                     /db_xref="GeneID:121353674"
ORIGIN      
        1 madeldfttg dagasstypm qcsalrkngf vvlkgrpcki vemstsktgk hghakvhlvg
       61 idiftgkkye dicpsthnmd vpnikrndyq ligiqdgyls lltesgevre dlklpegdlg
      121 keiegkfnan edvqisvisa mneecavaik pck
//
LOCUS       XP_041323649             122 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L22-like 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323649
VERSION     XP_041323649.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467715.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..122
                     /product="60S ribosomal protein L22-like 1 isoform X1"
                     /calculated_mol_wt=14296
     Region          16..114
                     /region_name="Ribosomal_L22e"
                     /note="Ribosomal L22e protein family; pfam01776"
                     /db_xref="CDD:460321"
     CDS             1..122
                     /gene="RPL22L1"
                     /coded_by="XM_041467715.1:143..511"
                     /db_xref="GeneID:121353676"
ORIGIN      
        1 mapqkdrksk kstwkfcldl thpvedgifd sgnfeqflke kvkvngktgn lgntvhierl
       61 knkitvtsek qfskrylkyl tkkylkknnl rdwlrvvasd ketyelryfq isqdeegses
      121 ee
//
LOCUS       XP_041323650             122 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L22-like 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323650
VERSION     XP_041323650.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467716.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..122
                     /product="60S ribosomal protein L22-like 1 isoform X2"
                     /calculated_mol_wt=14296
     Region          16..114
                     /region_name="Ribosomal_L22e"
                     /note="Ribosomal L22e protein family; pfam01776"
                     /db_xref="CDD:460321"
     CDS             1..122
                     /gene="RPL22L1"
                     /coded_by="XM_041467716.1:89..457"
                     /db_xref="GeneID:121353676"
ORIGIN      
        1 mapqkdrksk kstwkfcldl thpvedgifd sgnfeqflke kvkvngktgn lgntvhierl
       61 knkitvtsek qfskrylkyl tkkylkknnl rdwlrvvasd ketyelryfq isqdeegses
      121 ee
//
LOCUS       XP_041323651             724 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: aminopeptidase RNPEPL1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323651
VERSION     XP_041323651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467717.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..724
                     /product="LOW QUALITY PROTEIN: aminopeptidase RNPEPL1"
                     /calculated_mol_wt=80167
     Region          37..519
                     /region_name="M1_LTA4H"
                     /note="Peptidase M1 family including Leukotriene A4
                     hydrolase catalytic domain; cd09599"
                     /db_xref="CDD:341062"
     Site            order(203,205..206,332..336,357,360..361,364,379,383,390,
                     444,449)
                     /site_type="active"
                     /db_xref="CDD:341062"
     Region          566..679
                     /region_name="Leuk-A4-hydro_C"
                     /note="Leukotriene A4 hydrolase, C-terminal; pfam09127"
                     /db_xref="CDD:462686"
     CDS             1..724
                     /gene="RNPEPL1"
                     /coded_by="XM_041467717.1:45..2219"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121353677"
ORIGIN      
        1 maapaprppg lcccrkgsaa gpeappappp ppepppdvas asssqlfslr hlhlglelrp
       61 earalagclv lelcalrpqp ralvldvhpa lrvlsaafrr aaageapcaf afspprlppp
      121 aaaepppplp lfaqppcsac plgfrvdpft dygssltvsl paalqphqpf qiivryttad
      181 gpaiwwldpe ltygnakpfv ftqghsvcnr sffpcfdtpa vkctysatvk apagiqvlms
      241 atqssyleee gvyqfymeyp vpaylvalva gdlihadigp rsrvwaepcl lptaisklsg
      301 iverwltaae slygpyiwgr ydivflppsf pivamenpcl tfiissiles defliidvih
      361 evahswfgna vtnatweemw lseglatyaq rrittetyga aftcletafr ldalhrqmkl
      421 lgednpvskl qvklepgvnp snlmnlftye kgycfvyyls qlcgdprhfd sflrayieky
      481 kftsvvaqdl ldsflnffpe lkeqcveska gleferwlna tgpplaepdl sqgssltrpv
      541 etlfklwtte pldsvaaass vdltkwrtfq tvlfldrlld gsplphevik klsecyssql
      601 dsmnaeirir wlqivvrndy ypdlykvrrf lenqmsrmyt iplyedlctg tlksfaleif
      661 yqtqnqlhpn lrktiqqils qglnplpaid ttavttdtpa mvledkvsea tngaislrdv
      721 nvsa
//
LOCUS       XP_041323653            1306 aa            linear   VRT 06-MAY-2021
DEFINITION  structural maintenance of chromosomes protein 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323653
VERSION     XP_041323653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1306
                     /product="structural maintenance of chromosomes protein 4"
                     /calculated_mol_wt=148322
     Region          89..1280
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; pfam02463"
                     /db_xref="CDD:426784"
     CDS             1..1306
                     /gene="SMC4"
                     /coded_by="XM_041467719.1:255..4175"
                     /db_xref="GeneID:121353678"
ORIGIN      
        1 megeqptgtv pgkstktsta argkgreple essmdmeven egtrepdkep pqaasdevvd
       61 nrsleeilgs ippppppamt sepgaprlmi thivnqnfks yageqtlgpf hkrfsciigp
      121 ngsgksniid sllfvfgyra qkirskklsv lihnsdehkd ipscsvevhf qkiidkegdd
      181 yevipdskfc vsraayrdns styyingkkk tfrdvgmllr shgidldhnr flilqgeveq
      241 iammkpkgqt ehdegmleyl edligsarlk epihslcrrv ellnerrgek lnrvklveke
      301 kdaleedknk aieflclenq ifkeknqmcq yyihdlkkri ndlemqkeki neetksinek
      361 ssklaeetkt knkalkelek ksnkitkfie enkekfnqfd lqdvkvrerl khakskakkl
      421 ekqlqkdkek veelkkvpst sskaiedata krellakakd keeaklrqvl aslqeetkgi
      481 qkekegkeke lmefskevte trsnmeiaqs elelylskyn salaqlsqaq ealgststtl
      541 kerkaaikdi agklpqaeqq lkekenalek lgreesgakd lvrnlrrkve eaksslaqsr
      601 srgkvleall qqkkcgnipg lygrlgdlga iddkydvais sscgaldhiv vdtidtaqac
      661 vnflkaggig vatfialdkm avwekkmeki ptpenvprlf dlvkvedpmv rlafyfalrd
      721 tlvaknleea triafqkqkr wrvvtlqgqi ievsgtmtgg ggkvmkgrmg ssvvmdisee
      781 eiskmesqlq rdskravqce eeksqleeai rklqqeirem rntsekytas irgfseqetd
      841 lknqikelea nvaaaapdkt kqkelekvld gykkdyerva ekagkmeeev krlhqlimdt
      901 nnqklkaqqd kidkidkemd ecssaitkaq vavktadrnl kkseealqrt ekemeeneke
      961 mkklteeltt ledkatevmn eckqaeealp avqeelknll qemktirdae htlqsealsi
     1021 klkieqidsh isthqgkiky wqkeisklsl haiegearee lrllsdeele alqepdvlsk
     1081 kialleaqrh qlrpnlgaia eyrskeelyl khveeldnit serdkfreaf eelrkqrlne
     1141 fmagfnvitn klkenyqmlt lggdaelelv dsldpfsegi mfsvrppkks wkkifnlsgg
     1201 ektlsslalv falhhykptp lyfmdeidaa ldfknvsiva fyiyeqtkna qfiiislrnn
     1261 mfeiadrlig iyktqnttks vatnpkilav kgleelglps csvsqs
//
LOCUS       XP_041323654             497 aa            linear   VRT 06-MAY-2021
DEFINITION  importin subunit alpha-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323654
VERSION     XP_041323654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="importin subunit alpha-3"
                     /calculated_mol_wt=54892
     Region          1..496
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          49..74
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          85..118
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(109,113,117,151,155,159,194,198,202)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          126..162
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          168..203
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          220..245
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          255..287
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(278,282,286,320,324,328,362,366,370)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          295..331
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          337..371
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          380..414
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..497
                     /gene="KPNA4"
                     /coded_by="XM_041467720.1:25..1518"
                     /db_xref="GeneID:121353679"
ORIGIN      
        1 mrrqrnevvv elrknkrdeh llkrrnvphe dicedsdidg dfrvqntsle aivqnassdn
       61 qgiqlsavqa arkllssdrn ppiddliksg ilpilvhcle rddnpslqfe aawaltnias
      121 gtseqtqavv qsnavplflr llhsphqnvc eqavwalgni igdgpqcrdy vislgvvkpl
      181 lsfispsipi tflrnvtwvm vnlcrhkdpp ppmetiqeil palcvlihht dvnilvdtvw
      241 alsyltdagn eqiqmvidsg ivphlvplls hqevkvqtaa lravgnivtg tdeqtqvvln
      301 cealshfpal lthpkekink eavwflsnit agnqqqvqav idanlvpmii hlldkgdfgt
      361 qkeaawaisn ltisgrkdqv ayliqqnvip pfcnlltvkd aqvvqvvldg lsnilkmaee
      421 eaetianlie ecgglekieq lqnhenediy klayeiidqf fssddidedp slvpeaiqgg
      481 tfgfnssanv paegfqf
//
LOCUS       XP_041323655             993 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent DNA/RNA helicase DHX36 [Pyrgilauda ruficollis].
ACCESSION   XP_041323655
VERSION     XP_041323655.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467721.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..993
                     /product="ATP-dependent DNA/RNA helicase DHX36"
                     /calculated_mol_wt=113296
     Region          187..>756
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          192..371
                     /region_name="DEXHc_DHX36"
                     /note="DEXH-box helicase domain of DEAH-box helicase 36;
                     cd17981"
                     /db_xref="CDD:350739"
     Site            order(192,217..223,260,319..320)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350739"
     Region          816..902
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..993
                     /gene="DHX36"
                     /coded_by="XM_041467721.1:53..3034"
                     /db_xref="GeneID:121353680"
ORIGIN      
        1 msyeqrrdwg rgrgrgrdrd rdrdrdrggd ggapsaassa aggpggrgrh pghlkgreig
       61 lwyarrqgqk nrdadrqqra vvrmderree qivqllnsvq tkndkeqeam swwsgdeegp
      121 apeqpakvkp daekapvrql ptwektsldl dveflcekte qdaeldeqlk edlmkkrsdp
      181 ryiemqrfre klpsygmree lvklinshrv tvisgetgcg kttqvtqfil ddhierglgs
      241 tcrivctqpr risaisvaer vaaeraegcg ngrstgyqir lqsrlprkqg silycttgiv
      301 lqwlqsdkhl ssishvvlde ihernlqsdv lmsiikdlln vrldlkvilm satlnaekfs
      361 eyfdhcpmih ipgftfpvve ylledviekl rytpektdrr lhwrrgfmqg hmsrpekeek
      421 eeiyrqqwpg ylrqlqdrys astisalemm dddkvdldlv aalirhivle eedgailvfl
      481 pgwdnistlh ellmsqvmfk sdrfiiiplh slmptvnqtq vfkktppgvr kiviatniae
      541 tsitiddvvf vidggkiket hfdtqnnist maaewvskan akqrkgragr vqpghcyhly
      601 nglraslldd yqlpeilrtp leelclqiki lrlggiayfl sklmdppsrd avmlainhlm
      661 elnaldrqee ltplgvhlar lpvephigkm ilfgalfccl dpvltiaasl sfkdpfvipl
      721 gkekvadarr kelsknsksd hltvvnaftg weearscgfr nekdycweyf lssntmqmlh
      781 nmkgqfaehl laagfvnsrn pkdpksntns gnekllkavi caglypkvak irpsfskkrk
      841 mvkvctktdg svnihpksvn veetefhynw lvyhlkmrts siylydctev spycllffgg
      901 disiqkdkdq dtiavdewiv fqspekianl vkklrkeldd llqekienph pvdwndvkcr
      961 dtavltaiid littqeneav rnfaprfqge rys
//
LOCUS       XP_041323656             822 aa            linear   VRT 06-MAY-2021
DEFINITION  rho guanine nucleotide exchange factor 26 [Pyrgilauda ruficollis].
ACCESSION   XP_041323656
VERSION     XP_041323656.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467722.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..822
                     /product="rho guanine nucleotide exchange factor 26"
                     /calculated_mol_wt=90899
     Region          <6..260
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          395..573
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          595..728
                     /region_name="PH_ephexin"
                     /note="Ephexin Pleckstrin homology (PH) domain; cd01221"
                     /db_xref="CDD:269929"
     Region          744..798
                     /region_name="SH3_ARHGEF16_26"
                     /note="Src homology 3 domain of the Rho guanine nucleotide
                     exchange factors ARHGEF16 and ARHGEF26; cd11938"
                     /db_xref="CDD:212871"
     Site            order(749,751,754,758,776..777,792,794..795)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212871"
     CDS             1..822
                     /gene="ARHGEF26"
                     /coded_by="XM_041467722.1:18..2486"
                     /db_xref="GeneID:121353681"
ORIGIN      
        1 mdgqppagpa aprwrrratp rpqplawskl rpqsyqspsg vlvtdfpled rcafsvtqpt
       61 gtrppgspam gsvsngtvrp pgspalsper rsrvlalapd spvgstangt isppgsgqdr
      121 rprppgtagl palapqqeri vfgasaqpap cpraaeppea pggsprpsra agppeapggt
      181 pgsgppalpc aeppallsth spaarrvgsq qliprslaes rpagraqghe rglkvrslve
      241 tprlslgsdp edepeggpga lrrglrstsy rravvsgvdl dgsanckkkn rmsqpilkav
      301 vedkekfssl grikkmlkgq gtfdgeenav lyqnykekal didsdeesep qeqelddkvv
      361 fpykplrstw sqlsvvkkng lseaisqeer krqeaifevi ssehsyllsl eilirmfkns
      421 relsltmtkt eshhlfsnit dvyeaskkff eelearhqss ifiddisdiv arhagcsfdp
      481 yvkyctnevy qqrtlqrlla tnpafkevls rieshedcrn lpmisflilp mqrvtrlpll
      541 mdticqktpk dsakyenckq alkevsklvr lcnegarkme rtemmytins qlefkikpfp
      601 lvsssrwlvk rgeltayved tglfskrtsk qqvyfflfnd vliitkkkse esynvteysl
      661 reqllvlpcd geepscsprn aagmlhsgrs sashlfrlll lsnhagdrvq mllgaetqsd
      721 rarwitalgq dsdgqhtdrt slaqveiirt ytakqadels lqvadvvlvy qkvndgwyeg
      781 erlrdgqrgw fpsecareit cratldknme rmgrllglet nv
//
LOCUS       XP_041323657             408 aa            linear   VRT 06-MAY-2021
DEFINITION  neutral cholesterol ester hydrolase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323657
VERSION     XP_041323657.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467723.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="neutral cholesterol ester hydrolase 1"
                     /calculated_mol_wt=45730
     Region          109..381
                     /region_name="Abhydrolase_3"
                     /note="alpha/beta hydrolase fold; pfam07859"
                     /db_xref="CDD:400284"
     CDS             1..408
                     /gene="NCEH1"
                     /coded_by="XM_041467723.1:141..1367"
                     /db_xref="GeneID:121353683"
ORIGIN      
        1 mraawvllpa laalsayyvy lplpgavsdp wklmlldatf ravqqtchli hylrlshhli
       61 vlnylictfd klksvssedi kitdavfdgv evrvfeppak gdeslkrsvv yihgggwala
      121 sartslynnl crimaeslna vvvsveyrlv pevcfpeqyh dalratkhfl qpdvlaeysv
      181 dpsriaisgd saggnlaaav cqqlskdedl pvrpklqali ypvlqafdfn tpsyqqnmnm
      241 pvlpryimin ywidyingny dlahellinn htalnvgral sfrarlnwts llppsfkkdy
      301 kpvvqttgta aiverlpall dvravpllad datlarqprt yvltcendvl rddgamyatr
      361 leragvpvtl dhfhdcfhgc miftvwptdf sagvktrnsy ikwldenl
//
LOCUS       XP_041323658             513 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box-like/WD repeat-containing protein TBL1XR1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323658
VERSION     XP_041323658.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467724.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..513
                     /product="F-box-like/WD repeat-containing protein TBL1XR1"
                     /calculated_mol_wt=55453
     Region          7..31
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          163..469
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(167,185,189,195..196,214..215,241,245,251,263..264,
                     281,286,292..293,306,322,327,333..334,346..347,365,369,
                     375..376,388..389,415,420,426..427,439..440,458,462,
                     468..469)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          171..214
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..305
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          352..387
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          393..438
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <443..513
                     /region_name="8prop_heme_binding_protein"
                     /note="eight-bladed beta-propeller heme-binding domain in
                     cytochrome cd1 and similar proteins; cl49617"
                     /db_xref="CDD:483957"
     Region          444..482
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          446..480
                     /region_name="propeller blade"
                     /note="propeller blade [structural motif]"
                     /db_xref="CDD:467722"
     Region          485..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..513
                     /gene="TBL1XR1"
                     /coded_by="XM_041467724.1:416..1957"
                     /db_xref="GeneID:121353684"
ORIGIN      
        1 msissdevnf lvyrylqesg fshsaftfgi eshisqsnin galvppaali siiqkglqyv
       61 eaevsinedg tlfdgrpies lslidavmpd vvqtrqqayr dklaqqqaaa aaaaattnqq
      121 gsakngenta ngeengahti annhtdmmev dgdveippnk avvlrghese vficawnpvs
      181 dllasgsgds tariwnlsen stsgstqlvl rhcireggqd vpsnkdvtsl dwnsegtlla
      241 tgsydgfari wtkdgnlast lgqhkgpifa lkwnkkgnfi lsagvdktti iwdahtgeak
      301 qqfpfhsapa ldvdwqsnnt fascstdmci hvcklgqdrp iktfqghtne vnaikwdptg
      361 nllascsddm tlkiwsmkqd scvhdlqahn keiytikwsp tgpgtnnpna nlmlasasfd
      421 stvrlwdvdr gicihtltkh qepvysvafs pdgrylasgs fdkcvhiwnt qtgalvhsyr
      481 gtggifevcw naagdkvgas asdgsvcvld lrk
//
LOCUS       XP_041323659             513 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box-like/WD repeat-containing protein TBL1XR1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323659
VERSION     XP_041323659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..513
                     /product="F-box-like/WD repeat-containing protein TBL1XR1"
                     /calculated_mol_wt=55453
     Region          7..31
                     /region_name="LisH"
                     /note="pfam08513"
                     /db_xref="CDD:462501"
     Region          163..469
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(167,185,189,195..196,214..215,241,245,251,263..264,
                     281,286,292..293,306,322,327,333..334,346..347,365,369,
                     375..376,388..389,415,420,426..427,439..440,458,462,
                     468..469)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          171..214
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          269..305
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          310..345
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          352..387
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          393..438
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <443..513
                     /region_name="8prop_heme_binding_protein"
                     /note="eight-bladed beta-propeller heme-binding domain in
                     cytochrome cd1 and similar proteins; cl49617"
                     /db_xref="CDD:483957"
     Region          444..482
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          446..480
                     /region_name="propeller blade"
                     /note="propeller blade [structural motif]"
                     /db_xref="CDD:467722"
     Region          485..508
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..513
                     /gene="TBL1XR1"
                     /coded_by="XM_041467725.1:348..1889"
                     /db_xref="GeneID:121353684"
ORIGIN      
        1 msissdevnf lvyrylqesg fshsaftfgi eshisqsnin galvppaali siiqkglqyv
       61 eaevsinedg tlfdgrpies lslidavmpd vvqtrqqayr dklaqqqaaa aaaaattnqq
      121 gsakngenta ngeengahti annhtdmmev dgdveippnk avvlrghese vficawnpvs
      181 dllasgsgds tariwnlsen stsgstqlvl rhcireggqd vpsnkdvtsl dwnsegtlla
      241 tgsydgfari wtkdgnlast lgqhkgpifa lkwnkkgnfi lsagvdktti iwdahtgeak
      301 qqfpfhsapa ldvdwqsnnt fascstdmci hvcklgqdrp iktfqghtne vnaikwdptg
      361 nllascsddm tlkiwsmkqd scvhdlqahn keiytikwsp tgpgtnnpna nlmlasasfd
      421 stvrlwdvdr gicihtltkh qepvysvafs pdgrylasgs fdkcvhiwnt qtgalvhsyr
      481 gtggifevcw naagdkvgas asdgsvcvld lrk
//
LOCUS       XP_041323661             382 aa            linear   VRT 06-MAY-2021
DEFINITION  pentraxin-related protein PTX3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323661
VERSION     XP_041323661.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467727.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="pentraxin-related protein PTX3"
                     /calculated_mol_wt=41671
     Region          176..382
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Site            order(235,314,316,325,328)
                     /site_type="active"
                     /note="calcium mediated ligand binding site [active]"
                     /db_xref="CDD:238086"
     Site            order(276,293,333,381)
                     /site_type="active"
                     /note="intermolecular salt bridges [active]"
                     /db_xref="CDD:238086"
     CDS             1..382
                     /gene="PTX3"
                     /coded_by="XM_041467727.1:1..1149"
                     /db_xref="GeneID:121353685"
ORIGIN      
        1 mdsnaascdc qrehskwdkl fimlensqmk enmmlqalde lprlelqtlk aelsqlattl
       61 astfatvtsh vvsqveqvlv rsrdqaeear rlqeseqgkv lehvlqlshn vsvrlgwles
      121 awrrraeeqa qetalqqhkl dasrgdslil sslwkelqqt raelrasqqw aaqhllpagc
      181 etailfpmrs rkifgsvhpt sgmtlssfta ciwlkvteal dktivfsygt kfnpyeiqly
      241 lsratavlav ggaqhklaak nvvvpgkwlh lcgswsseng saslwaqgel aasawdvaga
      301 htipdggilq lgqekngccv gggfdealaf sgkltgfnlw drvlspaevt aqstgdtcgt
      361 rgnvvgwgvt evlpyggaqy vs
//
LOCUS       XP_041323662             838 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323662
VERSION     XP_041323662.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467728.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..838
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..838
                     /product="DISP complex protein LRCH3 isoform X1"
                     /calculated_mol_wt=93988
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          700..799
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(753,755..756,759..760,762,776..780,787,789..790,
                     792..793,796..797)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..838
                     /gene="LRCH3"
                     /coded_by="XM_041467728.1:55..2571"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvngfep lsvfeidnnt ntikrrpgtr kqslsglnqe scattlpsas
      601 afspvksddr stispgspta qtvhlsppyp ghaappsyrn psqrpesflf rtavrdgakk
      661 avassstcal spandsadpr vrqnskqree elelieqlrk niesrlkvsl psdlgaaltd
      721 gvvlchlanh vrprsvpsih vpspavpklt makcrrnven fleacrrigv pqdnlcspsd
      781 ilqlnlsvkr tvetllslgt dseesslvsl svqlwgfvvf yctlmltlcm fyrwvffl
//
LOCUS       XP_041323663             821 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323663
VERSION     XP_041323663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..821
                     /product="DISP complex protein LRCH3 isoform X2"
                     /calculated_mol_wt=92455
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          683..782
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(736,738..739,742..743,745,759..763,770,772..773,
                     775..776,779..780)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..821
                     /gene="LRCH3"
                     /coded_by="XM_041467729.1:56..2521"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvngfep lsvfeidnnt ntikrrpgtr kqslsglnqe scattlpsas
      601 afspvksddr stispgspta qtvhlsppyp ghaappsyrn psqrpesflf rtavrdgakk
      661 dprvrqnskq reeelelieq lrkniesrlk vslpsdlgaa ltdgvvlchl anhvrprsvp
      721 sihvpspavp kltmakcrrn venfleacrr igvpqdnlcs psdilqlnls vkrtvetlls
      781 lgtdseessl vslsvqlwgf vvfyctlmlt lcmfyrwvff l
//
LOCUS       XP_041323664             814 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323664
VERSION     XP_041323664.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467730.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..814
                     /product="DISP complex protein LRCH3 isoform X3"
                     /calculated_mol_wt=91021
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          693..801
                     /region_name="CH_LRCH3"
                     /note="calponin homology (CH) domain found in leucine-rich
                     repeat and calponin homology domain-containing protein 3;
                     cd21272"
                     /db_xref="CDD:409121"
     Site            order(694,698,753,755..756,759..760,762,772..780,786,
                     788..789,791..792,795..796,799)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409121"
     CDS             1..814
                     /gene="LRCH3"
                     /coded_by="XM_041467730.1:54..2498"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvngfep lsvfeidnnt ntikrrpgtr kqslsglnqe scattlpsas
      601 afspvksddr stispgspta qtvhlsppyp ghaappsyrn psqrpesflf rtavrdgakk
      661 avassstcal spandsadpr vrqnskqree elelieqlrk niesrlkvsl psdlgaaltd
      721 gvvlchlanh vrprsvpsih vpspavpklt makcrrnven fleacrrigv pqeqlclplh
      781 ileekgltqv avtvqallel appkqqplhh lsav
//
LOCUS       XP_041323665             811 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323665
VERSION     XP_041323665.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467731.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..811
                     /product="DISP complex protein LRCH3 isoform X4"
                     /calculated_mol_wt=90874
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          673..772
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(726,728..729,732..733,735,749..753,760,762..763,
                     765..766,769..770)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..811
                     /gene="LRCH3"
                     /coded_by="XM_041467731.1:55..2490"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvslsgl nqescattlp sasafspvks ddrstispgs ptaqtvhlsp
      601 pypghaapps yrnpsqrpes flfrtavrdg akkavassst calspandsa dprvrqnskq
      661 reeelelieq lrkniesrlk vslpsdlgaa ltdgvvlchl anhvrprsvp sihvpspavp
      721 kltmakcrrn venfleacrr igvpqdnlcs psdilqlnls vkrtvetlls lgtdseessl
      781 vslsvqlwgf vvfyctlmlt lcmfyrwvff l
//
LOCUS       XP_041323666             807 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323666
VERSION     XP_041323666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467732.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..807
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..807
                     /product="DISP complex protein LRCH3 isoform X5"
                     /calculated_mol_wt=90134
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          669..768
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(722,724..725,728..729,731,745..749,756,758..759,
                     761..762,765..766)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..807
                     /gene="LRCH3"
                     /coded_by="XM_041467732.1:54..2477"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrplpd spyflslssh htqapsadse lhrrhiertr reaqlaalqy eeermrtkqi
      481 qreavldfvk qkaslspqkq spmdsecpfp srrsqhtdds allvngfepl svfeidnntn
      541 tikrrpgtrk qslsglnqes cattlpsasa fspvksddrs tispgsptaq tvhlsppypg
      601 haappsyrnp sqrpesflfr tavrdgakka vassstcals pandsadprv rqnskqreee
      661 lelieqlrkn iesrlkvslp sdlgaaltdg vvlchlanhv rprsvpsihv pspavpkltm
      721 akcrrnvenf leacrrigvp qdnlcspsdi lqlnlsvkrt vetllslgtd seesslvsls
      781 vqlwgfvvfy ctlmltlcmf yrwvffl
//
LOCUS       XP_041323667             800 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323667
VERSION     XP_041323667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..800
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..800
                     /product="DISP complex protein LRCH3 isoform X6"
                     /calculated_mol_wt=89774
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          662..761
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(715,717..718,721..722,724,738..742,749,751..752,
                     754..755,758..759)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..800
                     /gene="LRCH3"
                     /coded_by="XM_041467733.1:55..2457"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvngfep lsvfeidnnt ntikrrpgtr kqslsglnqe scattlpsas
      601 afspvksddr stispgspta qtavassstc alspandsad prvrqnskqr eeelelieql
      661 rkniesrlkv slpsdlgaal tdgvvlchla nhvrprsvps ihvpspavpk ltmakcrrnv
      721 enfleacrri gvpqdnlcsp sdilqlnlsv krtvetllsl gtdseesslv slsvqlwgfv
      781 vfyctlmltl cmfyrwvffl
//
LOCUS       XP_041323668             787 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041323668
VERSION     XP_041323668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..787
                     /product="DISP complex protein LRCH3 isoform X7"
                     /calculated_mol_wt=88496
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          649..748
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(702,704..705,708..709,711,725..729,736,738..739,
                     741..742,745..746)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..787
                     /gene="LRCH3"
                     /coded_by="XM_041467734.1:54..2417"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvsddrs tispgsptaq tvhlsppypg haappsyrnp sqrpesflfr
      601 tavrdgakka vassstcals pandsadprv rqnskqreee lelieqlrkn iesrlkvslp
      661 sdlgaaltdg vvlchlanhv rprsvpsihv pspavpkltm akcrrnvenf leacrrigvp
      721 qdnlcspsdi lqlnlsvkrt vetllslgtd seesslvsls vqlwgfvvfy ctlmltlcmf
      781 yrwvffl
//
LOCUS       XP_041323669             783 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041323669
VERSION     XP_041323669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..783
                     /product="DISP complex protein LRCH3 isoform X8"
                     /calculated_mol_wt=88240
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          645..744
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(698,700..701,704..705,707,721..725,732,734..735,
                     737..738,741..742)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..783
                     /gene="LRCH3"
                     /coded_by="XM_041467735.1:56..2407"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvngfep lsvfeidnnt ntikrrpgtr kqslsglnqe scattlpsas
      601 afspvksddr stispgspta qtdprvrqns kqreeeleli eqlrkniesr lkvslpsdlg
      661 aaltdgvvlc hlanhvrprs vpsihvpspa vpkltmakcr rnvenfleac rrigvpqdnl
      721 cspsdilqln lsvkrtvetl lslgtdsees slvslsvqlw gfvvfyctlm ltlcmfyrwv
      781 ffl
//
LOCUS       XP_041323671             769 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323671
VERSION     XP_041323671.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467737.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="DISP complex protein LRCH3 isoform X9"
                     /calculated_mol_wt=86485
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          631..730
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(684,686..687,690..691,693,707..711,718,720..721,
                     723..724,727..728)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..769
                     /gene="LRCH3"
                     /coded_by="XM_041467737.1:54..2363"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsesdd
      541 rstispgspt aqtvhlsppy pghaappsyr npsqrpesfl frtavrdgak kavassstca
      601 lspandsadp rvrqnskqre eelelieqlr kniesrlkvs lpsdlgaalt dgvvlchlan
      661 hvrprsvpsi hvpspavpkl tmakcrrnve nfleacrrig vpqdnlcsps dilqlnlsvk
      721 rtvetllslg tdseesslvs lsvqlwgfvv fyctlmltlc mfyrwvffl
//
LOCUS       XP_041323672             749 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323672
VERSION     XP_041323672.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467738.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..749
                     /product="DISP complex protein LRCH3 isoform X10"
                     /calculated_mol_wt=84281
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          611..710
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(664,666..667,670..671,673,687..691,698,700..701,
                     703..704,707..708)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..749
                     /gene="LRCH3"
                     /coded_by="XM_041467738.1:53..2302"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvsddrs tispgsptaq tavassstca lspandsadp rvrqnskqre
      601 eelelieqlr kniesrlkvs lpsdlgaalt dgvvlchlan hvrprsvpsi hvpspavpkl
      661 tmakcrrnve nfleacrrig vpqdnlcsps dilqlnlsvk rtvetllslg tdseesslvs
      721 lsvqlwgfvv fyctlmltlc mfyrwvffl
//
LOCUS       XP_041323673             731 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041323673
VERSION     XP_041323673.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467739.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..731
                     /product="DISP complex protein LRCH3 isoform X11"
                     /calculated_mol_wt=82270
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          593..692
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(646,648..649,652..653,655,669..673,680,682..683,
                     685..686,689..690)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..731
                     /gene="LRCH3"
                     /coded_by="XM_041467739.1:53..2248"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsesdd
      541 rstispgspt aqtavassst calspandsa dprvrqnskq reeelelieq lrkniesrlk
      601 vslpsdlgaa ltdgvvlchl anhvrprsvp sihvpspavp kltmakcrrn venfleacrr
      661 igvpqdnlcs psdilqlnls vkrtvetlls lgtdseessl vslsvqlwgf vvfyctlmlt
      721 lcmfyrwvff l
//
LOCUS       XP_041323674             714 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X12 [Pyrgilauda ruficollis].
ACCESSION   XP_041323674
VERSION     XP_041323674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..714
                     /product="DISP complex protein LRCH3 isoform X12"
                     /calculated_mol_wt=80737
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          576..675
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(629,631..632,635..636,638,652..656,663,665..666,
                     668..669,672..673)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     CDS             1..714
                     /gene="LRCH3"
                     /coded_by="XM_041467740.1:54..2198"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsesdd
      541 rstispgspt aqtdprvrqn skqreeelel ieqlrknies rlkvslpsdl gaaltdgvvl
      601 chlanhvrpr svpsihvpsp avpkltmakc rrnvenflea crrigvpqdn lcspsdilql
      661 nlsvkrtvet llslgtdsee sslvslsvql wgfvvfyctl mltlcmfyrw vffl
//
LOCUS       XP_041323675             787 aa            linear   VRT 06-MAY-2021
DEFINITION  DISP complex protein LRCH3 isoform X13 [Pyrgilauda ruficollis].
ACCESSION   XP_041323675
VERSION     XP_041323675.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467741.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..787
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..787
                     /product="DISP complex protein LRCH3 isoform X13"
                     /calculated_mol_wt=87906
     Region          43..66
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <63..>269
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          67..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..112
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          113..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..201
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          203..225
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          226..244
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          666..774
                     /region_name="CH_LRCH3"
                     /note="calponin homology (CH) domain found in leucine-rich
                     repeat and calponin homology domain-containing protein 3;
                     cd21272"
                     /db_xref="CDD:409121"
     Site            order(667,671,726,728..729,732..733,735,745..753,759,
                     761..762,764..765,768..769,772)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409121"
     CDS             1..787
                     /gene="LRCH3"
                     /coded_by="XM_041467741.1:54..2417"
                     /db_xref="GeneID:121353686"
ORIGIN      
        1 maapeggsaa mpaacpappg psapgswsrs ldraleeaav sgtlslsgrk lrdyprasaa
       61 nhdlsdttqa dlsrnrlsel paeachfvsl etlnlyqnci ryipeavsnl qsltflnisr
      121 nqlstlpvhl crlplkvlia snnklvsipe eigqlrqlte ldvscneiqt ippqignles
      181 lrdlnvrrnn lvrlpeelae lplirldfsc nkittipvcy rnlrhlqtim lennplqspp
      241 aqicikgkih ifkylnieac kiapdlpdyd rrpmgfgsch eelyssrpyg aldsgfnsvd
      301 sgdkrwsgne ptdefsdlpl rvaeftkeqr lrresqyqen rgsavvingg vehdldqidy
      361 idscateeee eevrqpkcqd sdslssqfma yidqrrisne sspvkpvsir efqrtedtrr
      421 hlhqnrdtde lrrpetlnlm qdrehqvlrs yvdrterplp dspyflslss hhtqapsads
      481 elhrrhiert rreaqlaalq yeeermrtkq iqreavldfv kqkaslspqk qspmdsecpf
      541 psrrsqhtdd sallvslsgl nqescattlp sasafspvks ddrstispgs ptaqtvhlsp
      601 pypghaapps yrnpsqrpes flfrtavrdg akkavassst calspandsa dprvrqnskq
      661 reeelelieq lrkniesrlk vslpsdlgaa ltdgvvlchl anhvrprsvp sihvpspavp
      721 kltmakcrrn venfleacrr igvpqeqlcl plhileekgl tqvavtvqal lelappkqqp
      781 lhhlsav
//
LOCUS       XP_041323676             236 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4E type 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323676
VERSION     XP_041323676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..236
                     /product="eukaryotic translation initiation factor 4E type
                     2 isoform X1"
                     /calculated_mol_wt=27169
     Region          55..214
                     /region_name="IF4E"
                     /note="Eukaryotic initiation factor 4E; pfam01652"
                     /db_xref="CDD:460281"
     CDS             1..236
                     /gene="EIF4E2"
                     /coded_by="XM_041467742.1:137..847"
                     /db_xref="GeneID:121353687"
ORIGIN      
        1 mnnkfdalkd ddsgdhdqne enntqkdsek ekndrekpqs ttkrkavvpg paehplqyny
       61 tfwysrrtpg rptssqsyeq nikqigtfas veqfwrfysh mvrpgdltgh sdfhlfkegi
      121 kpmweddank nggkwiirlr kglasrcwen lilamlgeqf mvgeeicgav vsvrfqedii
      181 siwnktasdq attarirdtl rrvlnlppnt imeykthtds ikaweefhgl vnssgr
//
LOCUS       XP_041323677             234 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4E type 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323677
VERSION     XP_041323677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="eukaryotic translation initiation factor 4E type
                     2 isoform X2"
                     /calculated_mol_wt=26976
     Region          55..214
                     /region_name="IF4E"
                     /note="Eukaryotic initiation factor 4E; pfam01652"
                     /db_xref="CDD:460281"
     CDS             1..234
                     /gene="EIF4E2"
                     /coded_by="XM_041467743.1:137..841"
                     /db_xref="GeneID:121353687"
ORIGIN      
        1 mnnkfdalkd ddsgdhdqne enntqkdsek ekndrekpqs ttkrkavvpg paehplqyny
       61 tfwysrrtpg rptssqsyeq nikqigtfas veqfwrfysh mvrpgdltgh sdfhlfkegi
      121 kpmweddank nggkwiirlr kglasrcwen lilamlgeqf mvgeeicgav vsvrfqedii
      181 siwnktasdq attarirdtl rrvlnlppnt imeykthtds ikdnssfrnt kitl
//
LOCUS       XP_041323678             361 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1L [Pyrgilauda ruficollis].
ACCESSION   XP_041323678
VERSION     XP_041323678.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467744.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="protein phosphatase 1L"
                     /calculated_mol_wt=41019
     Region          93..351
                     /region_name="PP2Cc"
                     /note="Serine/threonine phosphatases, family 2C, catalytic
                     domain; The protein architecture and deduced catalytic
                     mechanism of PP2C phosphatases are similar to the PP1,
                     PP2A, PP2B family of protein Ser/Thr phosphatases, with
                     which PP2C shares no sequence...; cd00143"
                     /db_xref="CDD:238083"
     Site            order(102,106..107,128..130,302,342)
                     /site_type="active"
                     /db_xref="CDD:238083"
     CDS             1..361
                     /gene="PPM1L"
                     /coded_by="XM_041467744.1:527..1612"
                     /db_xref="GeneID:121353688"
ORIGIN      
        1 miedtmtlls llgrimryfl lrpetlfllc islalwsyff htdevktivk ssrdavkmvk
       61 gkvaeimqnd rlggldvlda efsktwefks hnvavysiqg rrdhmedrfe vitdlvnkth
      121 psifgifdgh ggesaaeyvk arlpevlkqh lqdyerdken svlsyqsile qqilsidrem
      181 lekltvsyde agttcliall sdkeltvanv gdsrgvlcdk dgnaiplshd hkpyqlkerk
      241 rikraggfis fngswrvqgi lamsrslgdy plknlnvvip dpdilsfdld klqpefmila
      301 sdglwdafsn eeavrfiker ldephfgaks ivlqsfyrgc pdnitvmvvk frnsskaeeq
      361 q
//
LOCUS       XP_041323679             328 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323679
VERSION     XP_041323679.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467745.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="UDP-GalNAc:beta-1,
                     3-N-acetylgalactosaminyltransferase 1"
                     /calculated_mol_wt=38262
     Region          88..281
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; pfam01762"
                     /db_xref="CDD:426415"
     CDS             1..328
                     /gene="B3GALNT1"
                     /coded_by="XM_041467745.1:594..1580"
                     /db_xref="GeneID:121353689"
ORIGIN      
        1 mipvpistlc mrplkwifll llvfslitmw yitfssragl dnvnplyffe yepvyrqprp
       61 ftlrerprca dlqpflvilv assprdvkar qairitwgsr dswwgqhilt lfllgqdtqr
      121 edraaalave destlygdii rqdfmdtydn ltlktimafq wfsefcsnar ffmktdadvf
      181 intpnlvkfl lqlnssenvf tgyplidnfa yrgfdpkryi syqeypfkly ppycsglgyi
      241 ldgklalrty elmghvrplk fedvyvgicl nilkvniaip edaeqfflyk idfdickyrh
      301 liavhgltss elvqfwqdls sntskpcf
//
LOCUS       XP_041323680             328 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323680
VERSION     XP_041323680.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467746.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="UDP-GalNAc:beta-1,
                     3-N-acetylgalactosaminyltransferase 1"
                     /calculated_mol_wt=38262
     Region          88..281
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; pfam01762"
                     /db_xref="CDD:426415"
     CDS             1..328
                     /gene="B3GALNT1"
                     /coded_by="XM_041467746.1:520..1506"
                     /db_xref="GeneID:121353689"
ORIGIN      
        1 mipvpistlc mrplkwifll llvfslitmw yitfssragl dnvnplyffe yepvyrqprp
       61 ftlrerprca dlqpflvilv assprdvkar qairitwgsr dswwgqhilt lfllgqdtqr
      121 edraaalave destlygdii rqdfmdtydn ltlktimafq wfsefcsnar ffmktdadvf
      181 intpnlvkfl lqlnssenvf tgyplidnfa yrgfdpkryi syqeypfkly ppycsglgyi
      241 ldgklalrty elmghvrplk fedvyvgicl nilkvniaip edaeqfflyk idfdickyrh
      301 liavhgltss elvqfwqdls sntskpcf
//
LOCUS       XP_041323681             328 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323681
VERSION     XP_041323681.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467747.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="UDP-GalNAc:beta-1,
                     3-N-acetylgalactosaminyltransferase 1"
                     /calculated_mol_wt=38262
     Region          88..281
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; pfam01762"
                     /db_xref="CDD:426415"
     CDS             1..328
                     /gene="B3GALNT1"
                     /coded_by="XM_041467747.1:653..1639"
                     /db_xref="GeneID:121353689"
ORIGIN      
        1 mipvpistlc mrplkwifll llvfslitmw yitfssragl dnvnplyffe yepvyrqprp
       61 ftlrerprca dlqpflvilv assprdvkar qairitwgsr dswwgqhilt lfllgqdtqr
      121 edraaalave destlygdii rqdfmdtydn ltlktimafq wfsefcsnar ffmktdadvf
      181 intpnlvkfl lqlnssenvf tgyplidnfa yrgfdpkryi syqeypfkly ppycsglgyi
      241 ldgklalrty elmghvrplk fedvyvgicl nilkvniaip edaeqfflyk idfdickyrh
      301 liavhgltss elvqfwqdls sntskpcf
//
LOCUS       XP_041323682             328 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323682
VERSION     XP_041323682.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467748.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="UDP-GalNAc:beta-1,
                     3-N-acetylgalactosaminyltransferase 1"
                     /calculated_mol_wt=38262
     Region          88..281
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; pfam01762"
                     /db_xref="CDD:426415"
     CDS             1..328
                     /gene="B3GALNT1"
                     /coded_by="XM_041467748.1:439..1425"
                     /db_xref="GeneID:121353689"
ORIGIN      
        1 mipvpistlc mrplkwifll llvfslitmw yitfssragl dnvnplyffe yepvyrqprp
       61 ftlrerprca dlqpflvilv assprdvkar qairitwgsr dswwgqhilt lfllgqdtqr
      121 edraaalave destlygdii rqdfmdtydn ltlktimafq wfsefcsnar ffmktdadvf
      181 intpnlvkfl lqlnssenvf tgyplidnfa yrgfdpkryi syqeypfkly ppycsglgyi
      241 ldgklalrty elmghvrplk fedvyvgicl nilkvniaip edaeqfflyk idfdickyrh
      301 liavhgltss elvqfwqdls sntskpcf
//
LOCUS       XP_041323683             328 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323683
VERSION     XP_041323683.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467749.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="UDP-GalNAc:beta-1,
                     3-N-acetylgalactosaminyltransferase 1"
                     /calculated_mol_wt=38262
     Region          88..281
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; pfam01762"
                     /db_xref="CDD:426415"
     CDS             1..328
                     /gene="B3GALNT1"
                     /coded_by="XM_041467749.1:590..1576"
                     /db_xref="GeneID:121353689"
ORIGIN      
        1 mipvpistlc mrplkwifll llvfslitmw yitfssragl dnvnplyffe yepvyrqprp
       61 ftlrerprca dlqpflvilv assprdvkar qairitwgsr dswwgqhilt lfllgqdtqr
      121 edraaalave destlygdii rqdfmdtydn ltlktimafq wfsefcsnar ffmktdadvf
      181 intpnlvkfl lqlnssenvf tgyplidnfa yrgfdpkryi syqeypfkly ppycsglgyi
      241 ldgklalrty elmghvrplk fedvyvgicl nilkvniaip edaeqfflyk idfdickyrh
      301 liavhgltss elvqfwqdls sntskpcf
//
LOCUS       XP_041323685             328 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323685
VERSION     XP_041323685.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467751.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="UDP-GalNAc:beta-1,
                     3-N-acetylgalactosaminyltransferase 1"
                     /calculated_mol_wt=38262
     Region          88..281
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; pfam01762"
                     /db_xref="CDD:426415"
     CDS             1..328
                     /gene="B3GALNT1"
                     /coded_by="XM_041467751.1:435..1421"
                     /db_xref="GeneID:121353689"
ORIGIN      
        1 mipvpistlc mrplkwifll llvfslitmw yitfssragl dnvnplyffe yepvyrqprp
       61 ftlrerprca dlqpflvilv assprdvkar qairitwgsr dswwgqhilt lfllgqdtqr
      121 edraaalave destlygdii rqdfmdtydn ltlktimafq wfsefcsnar ffmktdadvf
      181 intpnlvkfl lqlnssenvf tgyplidnfa yrgfdpkryi syqeypfkly ppycsglgyi
      241 ldgklalrty elmghvrplk fedvyvgicl nilkvniaip edaeqfflyk idfdickyrh
      301 liavhgltss elvqfwqdls sntskpcf
//
LOCUS       XP_041323686             328 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323686
VERSION     XP_041323686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="UDP-GalNAc:beta-1,
                     3-N-acetylgalactosaminyltransferase 1"
                     /calculated_mol_wt=38262
     Region          88..281
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; pfam01762"
                     /db_xref="CDD:426415"
     CDS             1..328
                     /gene="B3GALNT1"
                     /coded_by="XM_041467752.1:431..1417"
                     /db_xref="GeneID:121353689"
ORIGIN      
        1 mipvpistlc mrplkwifll llvfslitmw yitfssragl dnvnplyffe yepvyrqprp
       61 ftlrerprca dlqpflvilv assprdvkar qairitwgsr dswwgqhilt lfllgqdtqr
      121 edraaalave destlygdii rqdfmdtydn ltlktimafq wfsefcsnar ffmktdadvf
      181 intpnlvkfl lqlnssenvf tgyplidnfa yrgfdpkryi syqeypfkly ppycsglgyi
      241 ldgklalrty elmghvrplk fedvyvgicl nilkvniaip edaeqfflyk idfdickyrh
      301 liavhgltss elvqfwqdls sntskpcf
//
LOCUS       XP_041323687             696 aa            linear   VRT 06-MAY-2021
DEFINITION  PEX5-related protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323687
VERSION     XP_041323687.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467753.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..696
                     /product="PEX5-related protein isoform X1"
                     /calculated_mol_wt=77727
     Site            order(400..401,404..405,407,431,434..435,438..439,
                     441..442,465,468..469,472..473,476)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          400..424
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          426..694
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          429..459
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          464..492
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          544..572
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(545,548..549,552..553,555,579,582..583,586..587,
                     589..590,613,616..617,620..621,624)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          577..607
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          612..640
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..696
                     /gene="PEX5L"
                     /coded_by="XM_041467753.1:84..2174"
                     /db_xref="GeneID:121353691"
ORIGIN      
        1 myqghmqind liwtlmpgsr eespvqanml pkyckavget lkkkwlclqk sdltfalgkg
       61 araadkavam vmkeiprees aeekplltva sqgcrsqkea esseklvneq qesrpllsps
      121 iddflcetkp eavarpvtsn tavlstgldl ldlsepvlqt qnkakksenp srtegikast
      181 hrkktenpdl isvdseqkvq aarvadkssl dlvdiqtqie kwddvsfhgd rsskvhpsae
      241 rtssssraps keilwstenr sqseltnvks aldsdsasel elapaiqvge qcghrtfscw
      301 krnsntegtg lkarsskeqr wgtpllsrnh sleeeferak aavesdtefw dkmqaeweem
      361 arrnwisenq eapgqvtist iekgyyfhtd npfkdwpgaf eeglkkmkeg dlpvtilyle
      421 aailqepnda eawqflgitq aeneneqaai valqrclelq pnnlkalmal avsytntghq
      481 qeayqalrnw ikqnpkykyi vrskkgspal trrmsktade sslleevkdl yleaahqngd
      541 midpdlqtgl gvlfhlngef nraidafsaa ltvrpedytl wnrlgatlan gdrseeavea
      601 ytraleiqpg firsrynlgi scinlgayre avsnfltals lqrksrnqqh vphpalsgni
      661 waalrialsm mdqpelfqaa nvgdldillr afnlep
//
LOCUS       XP_041323688             633 aa            linear   VRT 06-MAY-2021
DEFINITION  PEX5-related protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323688
VERSION     XP_041323688.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467754.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..633
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..633
                     /product="PEX5-related protein isoform X2"
                     /calculated_mol_wt=70614
     Site            order(337..338,341..342,344,368,371..372,375..376,
                     378..379,402,405..406,409..410,413)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          337..361
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          363..631
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          366..396
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          401..429
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          481..509
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(482,485..486,489..490,492,516,519..520,523..524,
                     526..527,550,553..554,557..558,561)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          514..544
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          549..577
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..633
                     /gene="PEX5L"
                     /coded_by="XM_041467754.1:85..1986"
                     /db_xref="GeneID:121353691"
ORIGIN      
        1 myqghmqgkg araadkavam vmkeiprees aeekplltva sqlvneqqes rpllspsidd
       61 flcetkpeav arpvtsntav lstgldlldl sepvlqtqnk akksenpsrt egikasthrk
      121 ktenpdlisv dseqkvqaar vadkssldlv diqtqiekwd dvsfhgdrss kvhpsaerts
      181 sssrapskei lwstenrsqs eltnvksald sdsaselela paiqvgeqcg hrtfscwkrn
      241 sntegtglka rsskeqrwgt pllsrnhsle eeferakaav esdtefwdkm qaeweemarr
      301 nwisenqeap gqvtistiek gyyfhtdnpf kdwpgafeeg lkkmkegdlp vtilyleaai
      361 lqepndaeaw qflgitqaen eneqaaival qrclelqpnn lkalmalavs ytntghqqea
      421 yqalrnwikq npkykyivrs kkgspaltrr msktadessl leevkdlyle aahqngdmid
      481 pdlqtglgvl fhlngefnra idafsaaltv rpedytlwnr lgatlangdr seeaveaytr
      541 aleiqpgfir srynlgisci nlgayreavs nfltalslqr ksrnqqhvph palsgniwaa
      601 lrialsmmdq pelfqaanvg dldillrafn lep
//
LOCUS       XP_041323689             517 aa            linear   VRT 06-MAY-2021
DEFINITION  intestinal-type alkaline phosphatase [Pyrgilauda ruficollis].
ACCESSION   XP_041323689
VERSION     XP_041323689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467755.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..517
                     /product="intestinal-type alkaline phosphatase"
                     /calculated_mol_wt=55838
     Region          51..484
                     /region_name="Alk_phosphatase"
                     /note="Alkaline phosphatase; pfam00245"
                     /db_xref="CDD:395188"
     Site            order(60,109..110,173,184,329,334,338,375..376,448)
                     /site_type="active"
                     /db_xref="CDD:293736"
     Site            order(60,109..110,184,334,338,376,448)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293736"
     Site            order(64..65,68,71..72,95..97,99,101,103,107,120..122,132,
                     147,447,449..452,454,464,466..470,472..473,476)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293736"
     CDS             1..517
                     /gene="ALPI"
                     /coded_by="XM_041467755.1:1..1554"
                     /db_xref="GeneID:121353693"
ORIGIN      
        1 mqllasltlc lcaglstavi paeeenpsfw ykqaaaaida sfkiqprine aknliiflgd
       61 gfgiptitat rilkaqqkgk lgpetplald afpyvalskt ynvdrqvpds agtataylcg
      121 vkgnyktigv saaarhsecs ttagnevisv mkrarkagka vgvvtttrvq haspagtyah
      181 vvnrdwyads smpqearlqg ckdiawqlvh nvdinvilgg grkymtpvgt pdpeypansr
      241 qngiredgin lidkwlearp garyvwnrte mlaaaadpnv nylmglfepv dtkynlvrnt
      301 tldpsltemt eaaitilsrn pkgfylfveg gridhghhdg aahkalteav efdtaierag
      361 tmtdeaetlt vitadhshvf sfggytlrgs sifalgqkkt tdgknytsil ygngpgyphg
      421 erpnvdpeta mqfdyqpqaa vplesethgg edvailakgp mahlfhgvqe qtyvahamay
      481 aaciepytdc rqrnsgpgtr atplalllpa lllplfr
//
LOCUS       XP_041323690             362 aa            linear   VRT 06-MAY-2021
DEFINITION  replication factor C subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323690
VERSION     XP_041323690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467756.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="replication factor C subunit 4"
                     /calculated_mol_wt=39762
     Region          36..352
                     /region_name="rfc"
                     /note="replication factor C small subunit; Reviewed;
                     PRK00440"
                     /db_xref="CDD:234763"
     CDS             1..362
                     /gene="RFC4"
                     /coded_by="XM_041467756.1:107..1195"
                     /db_xref="GeneID:121353694"
ORIGIN      
        1 mqaflkgpas istkpvaake knaagssgeg krtkpipwve kyrpknvdev afqdevvavl
       61 kkslegadlp nllfygppgt gktstilaaa relfgpdlfr qrvlelnasd ergiqvirek
      121 vkafaqltas gsrsdgkmcp pfkivildea dsmtsaaqaa lrrtmekesk ttrfclicny
      181 isriieplts rcskfrfkpl sdsvqqqrll dvsekehvki sneavsylvk vsegdlrkai
      241 tflqsatrlm ggkeitekii teiagvipke tidelllgcq sgsfeklekl aknlinegfa
      301 vaqlvnqlhd tivesedysd kqksamvekl aevdkcladg adeflqlmsl calvmqqltq
      361 ni
//
LOCUS       XP_041323691             150 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323691
VERSION     XP_041323691.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467757.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..150
                     /product="DNA-directed RNA polymerases I, II, and III
                     subunit RPABC3 isoform X1"
                     /calculated_mol_wt=17012
     Region          2..147
                     /region_name="RPOL8c"
                     /note="RNA polymerase subunit 8; smart00658"
                     /db_xref="CDD:197821"
     CDS             1..150
                     /gene="POLR2H"
                     /coded_by="XM_041467757.1:63..515"
                     /db_xref="GeneID:121353695"
ORIGIN      
        1 magilfedif dvkdidpegk kfdrvsrlhc esesfkmdli ldvniqiypv dlgdkfrlvi
       61 astlyedgtl ddgeynptdd rpsradqfey vmygkvyrie gdetsteaat rlsayvsygg
      121 llmrlqgdan nlhgfevdsr vyllmkklaf
//
LOCUS       XP_041323692              84 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323692
VERSION     XP_041323692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="DNA-directed RNA polymerases I, II, and III
                     subunit RPABC3 isoform X2"
                     /calculated_mol_wt=9250
     Region          2..>52
                     /region_name="RNA_pol_RpbG"
                     /note="DNA-directed RNA polymerase, subunit G; cl02716"
                     /db_xref="CDD:470659"
     CDS             1..84
                     /gene="POLR2H"
                     /coded_by="XM_041467758.1:37..291"
                     /db_xref="GeneID:121353695"
ORIGIN      
        1 magilfedif dvkdidpegk kfdrvsrlhc esesfkmdli ldvniqiypv dlalptcptg
       61 gcscgcretq ttctglrwtl aftc
//
LOCUS       XP_041323693             577 aa            linear   VRT 06-MAY-2021
DEFINITION  acetylcholine receptor subunit gamma [Pyrgilauda ruficollis].
ACCESSION   XP_041323693
VERSION     XP_041323693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467759.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..577
                     /product="acetylcholine receptor subunit gamma"
                     /calculated_mol_wt=64770
     Region          112..305
                     /region_name="LGIC_ECD_nAChR_G"
                     /note="extracellular domain of nicotinic acetylcholine
                     receptor subunit gamma (CHRNG); cd19029"
                     /db_xref="CDD:349830"
     Site            order(124,132,160,162,164,166,174,182,184,192,204..206,
                     212,234..235,240,265)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349830"
     Region          213..227
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349830"
     Region          312..554
                     /region_name="Neur_chan_memb"
                     /note="Neurotransmitter-gated ion-channel transmembrane
                     region; pfam02932"
                     /db_xref="CDD:460753"
     CDS             1..577
                     /gene="CHRNG"
                     /coded_by="XM_041467759.1:163..1896"
                     /db_xref="GeneID:121353697"
ORIGIN      
        1 mpeelpgkvt sphqrekwvv trrsrapvav gtadggrgql scpsgrraqn asapaaessr
       61 spcapgtamr ghglllvlca lagvscrnqe ekllqdlmsn ynqqlrparq geiidvslkl
      121 tltnlislne reetlttnvw iemqwsdyrl swdpekydni qllrvpstmv wlpdivlenn
      181 idgtfeitly tnvlvspdgs iywlppaiyr svcvihvtyf pfdwqnctmv fqsqtysane
      241 inllltvedg qtvewifidp eaftengewa ikhrparkii nsehftpddi qyqqiifyli
      301 iqrkplfyii niivpcvlis amavlvyflp akaggqkctv sinvllaqtv flfliaqkvp
      361 etsqavplig kyltflmvvt vvivvnaviv lnvslrtpnt hsmsqrvrqv flhllphylg
      421 mavpeetpgp pqairrrssl glmvkadeym lwkartellf ekqkerdglm ktvldkigrg
      481 lesgstqdfc qsleeagpei racvdacnyi anatreqndf sseseewmmv gqvidrvcfl
      541 imaslfvcgt vgiflvahfn qapalpfpgd pkqylpq
//
LOCUS       XP_041323694             520 aa            linear   VRT 06-MAY-2021
DEFINITION  acetylcholine receptor subunit delta isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323694
VERSION     XP_041323694.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467760.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="acetylcholine receptor subunit delta isoform X1"
                     /calculated_mol_wt=59518
     Region          28..250
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(64,66,72..73,80,102,104,113..114,116,118..119,
                     130..132,134,144,146,148,152,174,249)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349787"
     Region          257..492
                     /region_name="Neur_chan_memb"
                     /note="Neurotransmitter-gated ion-channel transmembrane
                     region; pfam02932"
                     /db_xref="CDD:460753"
     CDS             1..520
                     /gene="CHRND"
                     /coded_by="XM_041467760.1:58..1620"
                     /db_xref="GeneID:121353698"
ORIGIN      
        1 mgsllqqlal lgalmlsapg glcgnqeerl ihhlfeekgy dkelrpvvst devvdvylal
       61 tlsnlislke vdetlttnvw lehgwtdyrl qwnksefggv evlrlppdml wlpeivlenn
      121 ndglfevayy cnvliydtgy vywlppaifr stclinvdff pfdwqncslr frslaysale
      181 inihlktdsd pdtgrsypve wiiidpegft engeweiihr parkniypdi ppdtsehqdi
      241 tfyliikrkp lfyvinivip ciliafmvil vfylpadsge kmtlvisvll aqsvflllis
      301 qrlpatshai pligkyllfi mllvtavvii svvvlnfhfr tpsthimsdw vrevfleslp
      361 rllgmtqpte saagapcirr cssagyiaka eeyfsvksrs elmfekqser hgltsritpa
      421 rlmppgmdsg eeqpsehmkp vidnanyivk hmrdensyne eidnwnrvar tldrlcffli
      481 tptlvvgtlw iflmgiynhp pplpfagdpy dyreenkrfi
//
LOCUS       XP_041323695             518 aa            linear   VRT 06-MAY-2021
DEFINITION  acetylcholine receptor subunit delta isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323695
VERSION     XP_041323695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..518
                     /product="acetylcholine receptor subunit delta isoform X2"
                     /calculated_mol_wt=59350
     Region          26..248
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(62,64,70..71,78,100,102,111..112,114,116..117,
                     128..130,132,142,144,146,150,172,247)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349787"
     Region          255..490
                     /region_name="Neur_chan_memb"
                     /note="Neurotransmitter-gated ion-channel transmembrane
                     region; pfam02932"
                     /db_xref="CDD:460753"
     CDS             1..518
                     /gene="CHRND"
                     /coded_by="XM_041467761.1:76..1632"
                     /db_xref="GeneID:121353698"
ORIGIN      
        1 mgsllqqlal lgalmlsggl cgnqeerlih hlfeekgydk elrpvvstde vvdvylaltl
       61 snlislkevd etlttnvwle hgwtdyrlqw nksefggvev lrlppdmlwl peivlennnd
      121 glfevayycn vliydtgyvy wlppaifrst clinvdffpf dwqncslrfr slaysalein
      181 ihlktdsdpd tgrsypvewi iidpegften geweiihrpa rkniypdipp dtsehqditf
      241 yliikrkplf yvinivipci liafmvilvf ylpadsgekm tlvisvllaq svflllisqr
      301 lpatshaipl igkyllfiml lvtavviisv vvlnfhfrtp sthimsdwvr evfleslprl
      361 lgmtqptesa agapcirrcs sagyiakaee yfsvksrsel mfekqserhg ltsritparl
      421 mppgmdsgee qpsehmkpvi dnanyivkhm rdensyneei dnwnrvartl drlcfflitp
      481 tlvvgtlwif lmgiynhppp lpfagdpydy reenkrfi
//
LOCUS       XP_041323697            1009 aa            linear   VRT 06-MAY-2021
DEFINITION  Hermansky-Pudlak syndrome 3 protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323697
VERSION     XP_041323697.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467763.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1009
                     /product="Hermansky-Pudlak syndrome 3 protein isoform X1"
                     /calculated_mol_wt=113898
     Region          3..214
                     /region_name="HPS3_N"
                     /note="Hermansky-Pudlak syndrome 3; pfam14761"
                     /db_xref="CDD:464300"
     Region          263..648
                     /region_name="HPS3_Mid"
                     /note="Hermansky-Pudlak syndrome 3, middle region;
                     pfam14762"
                     /db_xref="CDD:464301"
     Region          657..1007
                     /region_name="HPS3_C"
                     /note="Hermansky-Pudlak syndrome 3, C-terminal; pfam14763"
                     /db_xref="CDD:464302"
     CDS             1..1009
                     /gene="HPS3"
                     /coded_by="XM_041467763.1:520..3549"
                     /db_xref="GeneID:121353699"
ORIGIN      
        1 mvqlynlhpf gsqrvvpckq epahfccgqd vlfvastaas crvevftvre qgrcealgsf
       61 atlgqvlrma hssagdylvt ieekskatfl raymnwrcms agnsrvcvrm vghkmeesys
      121 ealkeqmsvv emplsdpplc isccpvngdl lvgcknklvm fclkycvinq nltvldfers
      181 lilhidnlip aevafcarhi aitteldvli lklelvqqsa drteqyaqgv sapekavdgg
      241 vkdespsthp lqleldefii cqkpvelrge esklceipvt lestelpted tkhfqvqyll
      301 frrfapdqsp fgfceemklh svqllpvyqt gisatayeet enkrkllslf cffslphvgy
      361 lyslgklvel istyqyseks eqavltpqfl hvitsqnlqc ftvrcsaaaa rgedpyidtt
      421 vkacppvtld vctlrmqlfi gpraichfkn hiilltkadt editerrkpt rrmlsrkads
      481 iksrtnsese pgwnlyiint vstiqlyrem veysrtyenv ktescihlls eahllvraai
      541 mdphflksde kedllrafre scaflgdcys rfdtkdyhla lpyyrmsgls mtevlkrlva
      601 egdeiqtyer gfifylthal nedsneelsk esgnkvlqif yladpvqlpd ilcspsmrnv
      661 cpltavkylq kvekmmpsvv ltltkaflal kmgdlamyeh emhsykettl acgfigqprl
      721 lqqrkegivm ptefavhlke mqpgllvaat valhenskie leeadtffkm lcnssentvp
      781 qllvdfweal lvvssqekil qelllrvtsq yvwrisekqi petkplktte dlinscshfg
      841 livpwvasim svgcssdkdy hedisrlqsl lcsqsinias alpvleplte adnvgltvrv
      901 lcntrlgkye qaidqlltrc pdaavfyaqh elkgdsqalw wnkllpelck rarltgngcp
      961 vlisslketl sivamelelr dflsllpedg taafflphll hcsqrkllt
//
LOCUS       XP_041323698             921 aa            linear   VRT 06-MAY-2021
DEFINITION  Hermansky-Pudlak syndrome 3 protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323698
VERSION     XP_041323698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..921
                     /product="Hermansky-Pudlak syndrome 3 protein isoform X2"
                     /calculated_mol_wt=103711
     Region          3..214
                     /region_name="HPS3_N"
                     /note="Hermansky-Pudlak syndrome 3; pfam14761"
                     /db_xref="CDD:464300"
     Region          263..560
                     /region_name="HPS3_Mid"
                     /note="Hermansky-Pudlak syndrome 3, middle region;
                     pfam14762"
                     /db_xref="CDD:464301"
     Region          569..919
                     /region_name="HPS3_C"
                     /note="Hermansky-Pudlak syndrome 3, C-terminal; pfam14763"
                     /db_xref="CDD:464302"
     CDS             1..921
                     /gene="HPS3"
                     /coded_by="XM_041467764.1:520..3285"
                     /db_xref="GeneID:121353699"
ORIGIN      
        1 mvqlynlhpf gsqrvvpckq epahfccgqd vlfvastaas crvevftvre qgrcealgsf
       61 atlgqvlrma hssagdylvt ieekskatfl raymnwrcms agnsrvcvrm vghkmeesys
      121 ealkeqmsvv emplsdpplc isccpvngdl lvgcknklvm fclkycvinq nltvldfers
      181 lilhidnlip aevafcarhi aitteldvli lklelvqqsa drteqyaqgv sapekavdgg
      241 vkdespsthp lqleldefii cqkpvelrge esklceipvt lestelpted tkhfqvqyll
      301 frrfapdqsp fgfceemklh svqllpvyqt gisatayeet enkrkllslf cffslphvgy
      361 lyslgklvel istyqyseks eqavltpqfl hvitsqnlqc ftvrcsaaaa rgedpyidtt
      421 vkveysrtye nvktescihl lseahllvra aimdphflks dekedllraf rescaflgdc
      481 ysrfdtkdyh lalpyyrmsg lsmtevlkrl vaegdeiqty ergfifylth alnedsneel
      541 skesgnkvlq ifyladpvql pdilcspsmr nvcpltavky lqkvekmmps vvltltkafl
      601 alkmgdlamy ehemhsyket tlacgfigqp rllqqrkegi vmptefavhl kemqpgllva
      661 atvalhensk ieleeadtff kmlcnssent vpqllvdfwe allvvssqek ilqelllrvt
      721 sqyvwrisek qipetkplkt tedlinscsh fglivpwvas imsvgcssdk dyhedisrlq
      781 sllcsqsini asalpvlepl teadnvgltv rvlcntrlgk yeqaidqllt rcpdaavfya
      841 qhelkgdsqa lwwnkllpel ckrarltgng cpvlisslke tlsivamele lrdflsllpe
      901 dgtaafflph llhcsqrkll t
//
LOCUS       XP_041323699             916 aa            linear   VRT 06-MAY-2021
DEFINITION  Hermansky-Pudlak syndrome 3 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323699
VERSION     XP_041323699.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467765.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..916
                     /product="Hermansky-Pudlak syndrome 3 protein isoform X3"
                     /calculated_mol_wt=103658
     Region          <2..121
                     /region_name="HPS3_N"
                     /note="Hermansky-Pudlak syndrome 3; pfam14761"
                     /db_xref="CDD:464300"
     Region          170..555
                     /region_name="HPS3_Mid"
                     /note="Hermansky-Pudlak syndrome 3, middle region;
                     pfam14762"
                     /db_xref="CDD:464301"
     Region          564..914
                     /region_name="HPS3_C"
                     /note="Hermansky-Pudlak syndrome 3, C-terminal; pfam14763"
                     /db_xref="CDD:464302"
     CDS             1..916
                     /gene="HPS3"
                     /coded_by="XM_041467765.1:827..3577"
                     /db_xref="GeneID:121353699"
ORIGIN      
        1 mnwrcmsagn srvcvrmvgh kmeesyseal keqmsvvemp lsdpplcisc cpvngdllvg
       61 cknklvmfcl kycvinqnlt vldferslil hidnlipaev afcarhiait teldvlilkl
      121 elvqqsadrt eqyaqgvsap ekavdggvkd espsthplql eldefiicqk pvelrgeesk
      181 lceipvtles telptedtkh fqvqyllfrr fapdqspfgf ceemklhsvq llpvyqtgis
      241 atayeetenk rkllslfcff slphvgylys lgklvelist yqysekseqa vltpqflhvi
      301 tsqnlqcftv rcsaaaarge dpyidttvka cppvtldvct lrmqlfigpr aichfknhii
      361 lltkadtedi terrkptrrm lsrkadsiks rtnsesepgw nlyiintvst iqlyremvey
      421 srtyenvkte scihllseah llvraaimdp hflksdeked llrafresca flgdcysrfd
      481 tkdyhlalpy yrmsglsmte vlkrlvaegd eiqtyergfi fylthalned sneelskesg
      541 nkvlqifyla dpvqlpdilc spsmrnvcpl tavkylqkve kmmpsvvltl tkaflalkmg
      601 dlamyehemh sykettlacg figqprllqq rkegivmpte favhlkemqp gllvaatval
      661 henskielee adtffkmlcn ssentvpqll vdfweallvv ssqekilqel llrvtsqyvw
      721 risekqipet kplkttedli nscshfgliv pwvasimsvg cssdkdyhed isrlqsllcs
      781 qsiniasalp vleplteadn vgltvrvlcn trlgkyeqai dqlltrcpda avfyaqhelk
      841 gdsqalwwnk llpelckrar ltgngcpvli sslketlsiv amelelrdfl sllpedgtaa
      901 fflphllhcs qrkllt
//
LOCUS       XP_041323700             916 aa            linear   VRT 06-MAY-2021
DEFINITION  Hermansky-Pudlak syndrome 3 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323700
VERSION     XP_041323700.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467766.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..916
                     /product="Hermansky-Pudlak syndrome 3 protein isoform X3"
                     /calculated_mol_wt=103658
     Region          <2..121
                     /region_name="HPS3_N"
                     /note="Hermansky-Pudlak syndrome 3; pfam14761"
                     /db_xref="CDD:464300"
     Region          170..555
                     /region_name="HPS3_Mid"
                     /note="Hermansky-Pudlak syndrome 3, middle region;
                     pfam14762"
                     /db_xref="CDD:464301"
     Region          564..914
                     /region_name="HPS3_C"
                     /note="Hermansky-Pudlak syndrome 3, C-terminal; pfam14763"
                     /db_xref="CDD:464302"
     CDS             1..916
                     /gene="HPS3"
                     /coded_by="XM_041467766.1:956..3706"
                     /db_xref="GeneID:121353699"
ORIGIN      
        1 mnwrcmsagn srvcvrmvgh kmeesyseal keqmsvvemp lsdpplcisc cpvngdllvg
       61 cknklvmfcl kycvinqnlt vldferslil hidnlipaev afcarhiait teldvlilkl
      121 elvqqsadrt eqyaqgvsap ekavdggvkd espsthplql eldefiicqk pvelrgeesk
      181 lceipvtles telptedtkh fqvqyllfrr fapdqspfgf ceemklhsvq llpvyqtgis
      241 atayeetenk rkllslfcff slphvgylys lgklvelist yqysekseqa vltpqflhvi
      301 tsqnlqcftv rcsaaaarge dpyidttvka cppvtldvct lrmqlfigpr aichfknhii
      361 lltkadtedi terrkptrrm lsrkadsiks rtnsesepgw nlyiintvst iqlyremvey
      421 srtyenvkte scihllseah llvraaimdp hflksdeked llrafresca flgdcysrfd
      481 tkdyhlalpy yrmsglsmte vlkrlvaegd eiqtyergfi fylthalned sneelskesg
      541 nkvlqifyla dpvqlpdilc spsmrnvcpl tavkylqkve kmmpsvvltl tkaflalkmg
      601 dlamyehemh sykettlacg figqprllqq rkegivmpte favhlkemqp gllvaatval
      661 henskielee adtffkmlcn ssentvpqll vdfweallvv ssqekilqel llrvtsqyvw
      721 risekqipet kplkttedli nscshfgliv pwvasimsvg cssdkdyhed isrlqsllcs
      781 qsiniasalp vleplteadn vgltvrvlcn trlgkyeqai dqlltrcpda avfyaqhelk
      841 gdsqalwwnk llpelckrar ltgngcpvli sslketlsiv amelelrdfl sllpedgtaa
      901 fflphllhcs qrkllt
//
LOCUS       XP_041323701             916 aa            linear   VRT 06-MAY-2021
DEFINITION  Hermansky-Pudlak syndrome 3 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323701
VERSION     XP_041323701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467767.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..916
                     /product="Hermansky-Pudlak syndrome 3 protein isoform X3"
                     /calculated_mol_wt=103658
     Region          <2..121
                     /region_name="HPS3_N"
                     /note="Hermansky-Pudlak syndrome 3; pfam14761"
                     /db_xref="CDD:464300"
     Region          170..555
                     /region_name="HPS3_Mid"
                     /note="Hermansky-Pudlak syndrome 3, middle region;
                     pfam14762"
                     /db_xref="CDD:464301"
     Region          564..914
                     /region_name="HPS3_C"
                     /note="Hermansky-Pudlak syndrome 3, C-terminal; pfam14763"
                     /db_xref="CDD:464302"
     CDS             1..916
                     /gene="HPS3"
                     /coded_by="XM_041467767.1:608..3358"
                     /db_xref="GeneID:121353699"
ORIGIN      
        1 mnwrcmsagn srvcvrmvgh kmeesyseal keqmsvvemp lsdpplcisc cpvngdllvg
       61 cknklvmfcl kycvinqnlt vldferslil hidnlipaev afcarhiait teldvlilkl
      121 elvqqsadrt eqyaqgvsap ekavdggvkd espsthplql eldefiicqk pvelrgeesk
      181 lceipvtles telptedtkh fqvqyllfrr fapdqspfgf ceemklhsvq llpvyqtgis
      241 atayeetenk rkllslfcff slphvgylys lgklvelist yqysekseqa vltpqflhvi
      301 tsqnlqcftv rcsaaaarge dpyidttvka cppvtldvct lrmqlfigpr aichfknhii
      361 lltkadtedi terrkptrrm lsrkadsiks rtnsesepgw nlyiintvst iqlyremvey
      421 srtyenvkte scihllseah llvraaimdp hflksdeked llrafresca flgdcysrfd
      481 tkdyhlalpy yrmsglsmte vlkrlvaegd eiqtyergfi fylthalned sneelskesg
      541 nkvlqifyla dpvqlpdilc spsmrnvcpl tavkylqkve kmmpsvvltl tkaflalkmg
      601 dlamyehemh sykettlacg figqprllqq rkegivmpte favhlkemqp gllvaatval
      661 henskielee adtffkmlcn ssentvpqll vdfweallvv ssqekilqel llrvtsqyvw
      721 risekqipet kplkttedli nscshfgliv pwvasimsvg cssdkdyhed isrlqsllcs
      781 qsiniasalp vleplteadn vgltvrvlcn trlgkyeqai dqlltrcpda avfyaqhelk
      841 gdsqalwwnk llpelckrar ltgngcpvli sslketlsiv amelelrdfl sllpedgtaa
      901 fflphllhcs qrkllt
//
LOCUS       XP_041323702             916 aa            linear   VRT 06-MAY-2021
DEFINITION  Hermansky-Pudlak syndrome 3 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323702
VERSION     XP_041323702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..916
                     /product="Hermansky-Pudlak syndrome 3 protein isoform X3"
                     /calculated_mol_wt=103658
     Region          <2..121
                     /region_name="HPS3_N"
                     /note="Hermansky-Pudlak syndrome 3; pfam14761"
                     /db_xref="CDD:464300"
     Region          170..555
                     /region_name="HPS3_Mid"
                     /note="Hermansky-Pudlak syndrome 3, middle region;
                     pfam14762"
                     /db_xref="CDD:464301"
     Region          564..914
                     /region_name="HPS3_C"
                     /note="Hermansky-Pudlak syndrome 3, C-terminal; pfam14763"
                     /db_xref="CDD:464302"
     CDS             1..916
                     /gene="HPS3"
                     /coded_by="XM_041467768.1:539..3289"
                     /db_xref="GeneID:121353699"
ORIGIN      
        1 mnwrcmsagn srvcvrmvgh kmeesyseal keqmsvvemp lsdpplcisc cpvngdllvg
       61 cknklvmfcl kycvinqnlt vldferslil hidnlipaev afcarhiait teldvlilkl
      121 elvqqsadrt eqyaqgvsap ekavdggvkd espsthplql eldefiicqk pvelrgeesk
      181 lceipvtles telptedtkh fqvqyllfrr fapdqspfgf ceemklhsvq llpvyqtgis
      241 atayeetenk rkllslfcff slphvgylys lgklvelist yqysekseqa vltpqflhvi
      301 tsqnlqcftv rcsaaaarge dpyidttvka cppvtldvct lrmqlfigpr aichfknhii
      361 lltkadtedi terrkptrrm lsrkadsiks rtnsesepgw nlyiintvst iqlyremvey
      421 srtyenvkte scihllseah llvraaimdp hflksdeked llrafresca flgdcysrfd
      481 tkdyhlalpy yrmsglsmte vlkrlvaegd eiqtyergfi fylthalned sneelskesg
      541 nkvlqifyla dpvqlpdilc spsmrnvcpl tavkylqkve kmmpsvvltl tkaflalkmg
      601 dlamyehemh sykettlacg figqprllqq rkegivmpte favhlkemqp gllvaatval
      661 henskielee adtffkmlcn ssentvpqll vdfweallvv ssqekilqel llrvtsqyvw
      721 risekqipet kplkttedli nscshfgliv pwvasimsvg cssdkdyhed isrlqsllcs
      781 qsiniasalp vleplteadn vgltvrvlcn trlgkyeqai dqlltrcpda avfyaqhelk
      841 gdsqalwwnk llpelckrar ltgngcpvli sslketlsiv amelelrdfl sllpedgtaa
      901 fflphllhcs qrkllt
//
LOCUS       XP_041323703             508 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin alpha-3 chain-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323703
VERSION     XP_041323703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="tubulin alpha-3 chain-like isoform X1"
                     /calculated_mol_wt=57046
     Region          60..506
                     /region_name="PTZ00335"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:185562"
     CDS             1..508
                     /gene="LOC121353700"
                     /coded_by="XM_041467769.1:42..1568"
                     /db_xref="GeneID:121353700"
ORIGIN      
        1 mrgwsgdwnf mklprkrkeq pkyiafsfpp llfsrytltr dyvvfrifqy sqsqcrsakr
       61 ecisihvgqa gvqignacwe lyclehgiqp dgqvpsdntm grgddsfntf fsetgagkhv
      121 pravfvdlep tvvdevrtgt yrqlfhpeql itgkedaann yarghytigk eivdlvldri
      181 rkladlctgl qgflifhsfg ggtgsgfasl lmerlsvdyg kksklefaiy papqvstavv
      241 epynsiltth ttlehsdcaf mvdneaiydi crrnldigrp tytnlnrlig qivssitasl
      301 rfdgalnvdl tefqtnlvpy prihfplvty apiisaekay heqlsvaeit hacfepanqm
      361 vkcdprhgky maccmlyrgd vvpkdvnaai atiktkrtiq fvdwcptgfk vginyqpptv
      421 vpgadlakvq ravcmlsntt aiaeawarld hkfdlmytkr afvhwyvgeg meegefsear
      481 edlaalekdy eevgldsvea eaeegdey
//
LOCUS       XP_041323704             488 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin alpha-3 chain-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323704
VERSION     XP_041323704.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467770.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..488
                     /product="tubulin alpha-3 chain-like isoform X2"
                     /calculated_mol_wt=54582
     Region          40..486
                     /region_name="PTZ00335"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:185562"
     CDS             1..488
                     /gene="LOC121353700"
                     /coded_by="XM_041467770.1:42..1508"
                     /db_xref="GeneID:121353700"
ORIGIN      
        1 mrgwsgdwnf mklprkrkeq pkyiafsfpp llfsrytltr ecisihvgqa gvqignacwe
       61 lyclehgiqp dgqvpsdntm grgddsfntf fsetgagkhv pravfvdlep tvvdevrtgt
      121 yrqlfhpeql itgkedaann yarghytigk eivdlvldri rkladlctgl qgflifhsfg
      181 ggtgsgfasl lmerlsvdyg kksklefaiy papqvstavv epynsiltth ttlehsdcaf
      241 mvdneaiydi crrnldigrp tytnlnrlig qivssitasl rfdgalnvdl tefqtnlvpy
      301 prihfplvty apiisaekay heqlsvaeit hacfepanqm vkcdprhgky maccmlyrgd
      361 vvpkdvnaai atiktkrtiq fvdwcptgfk vginyqpptv vpgadlakvq ravcmlsntt
      421 aiaeawarld hkfdlmytkr afvhwyvgeg meegefsear edlaalekdy eevgldsvea
      481 eaeegdey
//
LOCUS       XP_041323705             450 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin alpha-3 chain-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323705
VERSION     XP_041323705.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467771.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="tubulin alpha-3 chain-like isoform X3"
                     /calculated_mol_wt=49937
     Region          1..448
                     /region_name="PTZ00335"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:185562"
     CDS             1..450
                     /gene="LOC121353700"
                     /coded_by="XM_041467771.1:68..1420"
                     /db_xref="GeneID:121353700"
ORIGIN      
        1 mrecisihvg qagvqignac welyclehgi qpdgqvpsdn tmgrgddsfn tffsetgagk
       61 hvpravfvdl eptvvdevrt gtyrqlfhpe qlitgkedaa nnyarghyti gkeivdlvld
      121 rirkladlct glqgflifhs fgggtgsgfa sllmerlsvd ygkksklefa iypapqvsta
      181 vvepynsilt thttlehsdc afmvdneaiy dicrrnldig rptytnlnrl igqivssita
      241 slrfdgalnv dltefqtnlv pyprihfplv tyapiisaek ayheqlsvae ithacfepan
      301 qmvkcdprhg kymaccmlyr gdvvpkdvna aiatiktkrt iqfvdwcptg fkvginyqpp
      361 tvvpgadlak vqravcmlsn ttaiaeawar ldhkfdlmyt krafvhwyvg egmeegefse
      421 aredlaalek dyeevgldsv eaeaeegdey
//
LOCUS       XP_041323706             409 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin alpha-3 chain-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323706
VERSION     XP_041323706.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467772.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="tubulin alpha-3 chain-like isoform X4"
                     /calculated_mol_wt=45485
     Region          1..407
                     /region_name="PTZ00335"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:185562"
     CDS             1..409
                     /gene="LOC121353700"
                     /coded_by="XM_041467772.1:304..1533"
                     /db_xref="GeneID:121353700"
ORIGIN      
        1 mgrgddsfnt ffsetgagkh vpravfvdle ptvvdevrtg tyrqlfhpeq litgkedaan
       61 nyarghytig keivdlvldr irkladlctg lqgflifhsf gggtgsgfas llmerlsvdy
      121 gkksklefai ypapqvstav vepynsiltt httlehsdca fmvdneaiyd icrrnldigr
      181 ptytnlnrli gqivssitas lrfdgalnvd ltefqtnlvp yprihfplvt yapiisaeka
      241 yheqlsvaei thacfepanq mvkcdprhgk ymaccmlyrg dvvpkdvnaa iatiktkrti
      301 qfvdwcptgf kvginyqppt vvpgadlakv qravcmlsnt taiaeawarl dhkfdlmytk
      361 rafvhwyvge gmeegefsea redlaalekd yeevgldsve aeaeegdey
//
LOCUS       XP_041323707             409 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin alpha-3 chain-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323707
VERSION     XP_041323707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="tubulin alpha-3 chain-like isoform X4"
                     /calculated_mol_wt=45485
     Region          1..407
                     /region_name="PTZ00335"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:185562"
     CDS             1..409
                     /gene="LOC121353700"
                     /coded_by="XM_041467773.1:344..1573"
                     /db_xref="GeneID:121353700"
ORIGIN      
        1 mgrgddsfnt ffsetgagkh vpravfvdle ptvvdevrtg tyrqlfhpeq litgkedaan
       61 nyarghytig keivdlvldr irkladlctg lqgflifhsf gggtgsgfas llmerlsvdy
      121 gkksklefai ypapqvstav vepynsiltt httlehsdca fmvdneaiyd icrrnldigr
      181 ptytnlnrli gqivssitas lrfdgalnvd ltefqtnlvp yprihfplvt yapiisaeka
      241 yheqlsvaei thacfepanq mvkcdprhgk ymaccmlyrg dvvpkdvnaa iatiktkrti
      301 qfvdwcptgf kvginyqppt vvpgadlakv qravcmlsnt taiaeawarl dhkfdlmytk
      361 rafvhwyvge gmeegefsea redlaalekd yeevgldsve aeaeegdey
//
LOCUS       XP_041323708             409 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin alpha-3 chain-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323708
VERSION     XP_041323708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="tubulin alpha-3 chain-like isoform X4"
                     /calculated_mol_wt=45485
     Region          1..407
                     /region_name="PTZ00335"
                     /note="tubulin alpha chain; Provisional"
                     /db_xref="CDD:185562"
     CDS             1..409
                     /gene="LOC121353700"
                     /coded_by="XM_041467774.1:284..1513"
                     /db_xref="GeneID:121353700"
ORIGIN      
        1 mgrgddsfnt ffsetgagkh vpravfvdle ptvvdevrtg tyrqlfhpeq litgkedaan
       61 nyarghytig keivdlvldr irkladlctg lqgflifhsf gggtgsgfas llmerlsvdy
      121 gkksklefai ypapqvstav vepynsiltt httlehsdca fmvdneaiyd icrrnldigr
      181 ptytnlnrli gqivssitas lrfdgalnvd ltefqtnlvp yprihfplvt yapiisaeka
      241 yheqlsvaei thacfepanq mvkcdprhgk ymaccmlyrg dvvpkdvnaa iatiktkrti
      301 qfvdwcptgf kvginyqppt vvpgadlakv qravcmlsnt taiaeawarl dhkfdlmytk
      361 rafvhwyvge gmeegefsea redlaalekd yeevgldsve aeaeegdey
//
LOCUS       XP_041323709             201 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 4 L6 family member 18 [Pyrgilauda ruficollis].
ACCESSION   XP_041323709
VERSION     XP_041323709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="transmembrane 4 L6 family member 18"
                     /calculated_mol_wt=22049
     Region          1..193
                     /region_name="L6_membrane"
                     /note="L6 membrane protein; pfam05805"
                     /db_xref="CDD:461745"
     CDS             1..201
                     /gene="TM4SF18"
                     /coded_by="XM_041467775.1:218..823"
                     /db_xref="GeneID:121353702"
ORIGIN      
        1 maletcgscl scllvplalw sivvnillyf pngkalhaas yqlpnhewyf egicfsgvmi
       61 lllavilitl ecsvfyrccq sescnktyrs fisivlallg iafsgyscii ftlhliqgpf
      121 cnsssgwnyi fkdtaggylt dypswskcte panivewnii lisilialsg lqliicilkv
      181 aaelkrtlcg tysvfvqagl l
//
LOCUS       XP_041323710            1069 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ceruloplasmin [Pyrgilauda ruficollis].
ACCESSION   XP_041323710
VERSION     XP_041323710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467776.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1069
                     /product="LOW QUALITY PROTEIN: ceruloplasmin"
                     /calculated_mol_wt=121098
     Region          22..204
                     /region_name="Cupredoxin"
                     /note="Cupredoxin superfamily; cl19115"
                     /db_xref="CDD:473140"
     Region          216..356
                     /region_name="CuRO_2_ceruloplasmin"
                     /note="The second cupredoxin domain of Ceruloplasmin;
                     cd11021"
                     /db_xref="CDD:259907"
     Site            order(218..220,222,226..228,230..233,236..238,241..244,
                     247..248,257..259,261..262,265..275,286..288,290,310,
                     323..325,337,346..348,351)
                     /site_type="other"
                     /note="Domain 1 interface [polypeptide binding]"
                     /db_xref="CDD:259907"
     Site            order(291..293,311,319..323)
                     /site_type="other"
                     /note="Domain 6 interface [polypeptide binding]"
                     /db_xref="CDD:259907"
     Site            order(296,298,300,311,315,317,319,341..345,347)
                     /site_type="other"
                     /note="Domain 4 interface [polypeptide binding]"
                     /db_xref="CDD:259907"
     Site            order(300,305,311..312,314,331..332,335..337,341,343,
                     346..347,353)
                     /site_type="other"
                     /note="Domain 3 interface [polypeptide binding]"
                     /db_xref="CDD:259907"
     Region          370..568
                     /region_name="CuRO_3_ceruloplasmin"
                     /note="The third cupredoxin domain of Ceruloplasmin;
                     cd04224"
                     /db_xref="CDD:259886"
     Site            order(383..384,386..387,389,391..392,408..409,411..416,
                     419..423,444..449,452,471,478,530..532,534,536,542..547,
                     550,552,554,566..568)
                     /site_type="other"
                     /note="Domain 4 interface [polypeptide binding]"
                     /db_xref="CDD:259886"
     Site            order(476,478..479,481..482,484,519..522,524,527,531,533,
                     536,541..542,546)
                     /site_type="other"
                     /note="Domain 2 interface [polypeptide binding]"
                     /db_xref="CDD:259886"
     Region          573..714
                     /region_name="CuRO_4_ceruloplasmin"
                     /note="The fourth cupredoxin domain of Ceruloplasmin;
                     cd11022"
                     /db_xref="CDD:259908"
     Site            order(573..575,577,580..583,585..587,591..592,595..596,
                     613..614,616,618,620..623,626..630,641..643,646,676..680)
                     /site_type="other"
                     /note="Domain 3 interface [polypeptide binding]"
                     /db_xref="CDD:259908"
     Site            order(585,646..648,664,674..677)
                     /site_type="other"
                     /note="Domain 2 interface [polypeptide binding]"
                     /db_xref="CDD:259908"
     Site            order(649,651,653,664,666,668,670,672,674,696..700)
                     /site_type="other"
                     /note="Domain 6 interface [polypeptide binding]"
                     /db_xref="CDD:259908"
     Site            order(655,658,660,662,664..670,686..687,690..691,694,698,
                     701..702)
                     /site_type="other"
                     /note="Domain 5 interface [polypeptide binding]"
                     /db_xref="CDD:259908"
     Region          728..898
                     /region_name="CuRO_5_ceruloplasmin"
                     /note="The fifth cupredoxin domain of Ceruloplasmin;
                     cd04225"
                     /db_xref="CDD:259887"
     Site            order(736,738..744,747..748,761..764,766,768..778,
                     799..804,807,809,824,826,828,833,866..868,870,872,874,880,
                     883..887,890..892,894)
                     /site_type="other"
                     /note="Domain 6 interface [polypeptide binding]"
                     /db_xref="CDD:259887"
     Site            order(833..834,836..837,859..867,873,876,881..882,886)
                     /site_type="other"
                     /note="Domain 4 interface [polypeptide binding]"
                     /db_xref="CDD:259887"
     Region          909..1053
                     /region_name="CuRO_6_ceruloplasmin"
                     /note="The sixth cupredoxin domain of Ceruloplasmin;
                     cd11012"
                     /db_xref="CDD:259898"
     Site            order(911..913,915,917..921,923..926,930,934..937,
                     940..941,945,947..948,950..955,958..968,979,981,984..985,
                     1002..1003,1019,1021,1033,1044,1047)
                     /site_type="other"
                     /note="Domain 5 interface [polypeptide binding]"
                     /db_xref="CDD:259898"
     Site            order(984..986,1002,1015..1020)
                     /site_type="other"
                     /note="Domain 4 interface [polypeptide binding]"
                     /db_xref="CDD:259898"
     Site            order(987,989,991,1001,1007,1010..1011,1013,1015,
                     1037..1041)
                     /site_type="other"
                     /note="Domain 2 interface [polypeptide binding]"
                     /db_xref="CDD:259898"
     Site            order(993,995..998,1004,1006..1010,1027..1028,1031..1033,
                     1035,1037,1039,1043)
                     /site_type="other"
                     /note="Domain 1 interface [polypeptide binding]"
                     /db_xref="CDD:259898"
     CDS             1..1069
                     /gene="LOC121353703"
                     /coded_by="XM_041467776.1:2714..5923"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121353703"
ORIGIN      
        1 mklfllicll vsccchagav nreyyigite tawnyapgnv saisgqlfae eeqaevflkr
       61 gphrigntyk kaiyiqytnh lydvivekps wlgflgpiik gevgdsitih lknfasrnyt
      121 lhphgvrytk enegafypdt tkdlqkqdda vepggqytyt wdvtedqgpa kadadcitra
      181 yhshidaprd vasglvgpli icrkdtmnrd tdqhfdaefi lmfsvvdenl swylednirt
      241 ycfepskvdk ddedfqesnk mhsingymyg ylpnltmcve dkikwhlfgm gneadihsay
      301 fhgqtlierh hrvdtislfp atfidavmvp rspgewllsc qvndhieggm qalfkvedck
      361 kstpghsest kirqyflaae eiiwnygpsa vnhftgqeli vdseshiffe qsetriggsy
      421 kkaiykeytd esfteykkrl aeeahlgllg pviraevger irvtfrnnas rpfsiqphgv
      481 syrrsgagar fgtapagaes pashvnpgtt ftyewdvped vgpteqdpdc ltwlyysavd
      541 avrdtssglv gpllvcrkga llssgkqknv nmeffllatv fdenlswyld dnilmftlsp
      601 dkidkddedf qesnkmhsin gymygnqpgl emckgsvvsw hlmglgsevd vhgiyfsent
      661 fvtkgtrrdt anlfphtvlt aimkpdsegv fevscltadh ytggmkqnyk vkkchswnvd
      721 lsmylhekiy yiaavevewd yspnrtwefe rhqyhkespg npflnkddkf igskykkvvy
      781 reytdqtfst pknrakeqqh leiqgpllvs nigdkiiivf knlasrpysi hahgvktdss
      841 vvavtnpgdt ktyvwkiper sspgrgdshc iawayhstvd ivkdtysgli gtlivchrhy
      901 lpsfhtkkkv qfallfmvfd eneswylden iktystnphl vdkedegfle snkmhaingk
      961 vfgnlhgltm hvgdnvswyl mgmgneidih tvhfhghsfd ykqtgiyrad vfdlfpgtsq
     1021 tvemtpqnpg twllhchvtd hihagmeaty tvlpkegksx pslvmsvmf
//
LOCUS       XP_041323711             381 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF13 [Pyrgilauda ruficollis].
ACCESSION   XP_041323711
VERSION     XP_041323711.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467777.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="E3 ubiquitin-protein ligase RNF13"
                     /calculated_mol_wt=42615
     Region          23..180
                     /region_name="PA_C_RZF_like"
                     /note="PA_C-RZF_ like: Protease-associated (PA) domain
                     C_RZF-like. This group includes various PA
                     domain-containing proteins similar to C-RZF (chicken
                     embryo RING zinc finger) protein. These proteins contain a
                     C3H2C3 RING finger. C-RZF is expressed in embryo...;
                     cd02123"
                     /db_xref="CDD:239038"
     Site            130..132
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239038"
     Region          230..288
                     /region_name="RING-H2_RNF13"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 13 (RNF13) and similar proteins; cd16796"
                     /db_xref="CDD:438450"
     Site            order(240,243,258,260,263,266,278,281)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438450"
     CDS             1..381
                     /gene="RNF13"
                     /coded_by="XM_041467777.1:400..1545"
                     /db_xref="GeneID:121353704"
ORIGIN      
        1 mllsigmlml satqiytivt vqlfaflnll pveadilayn lengtqtfdd lparfgyrlp
       61 aeglkgflin skpenacepi appplrdnss gafivlirrl ecnfdvkvln aqragykaai
      121 vhnvdsddli smgsndievl kkidipsvfi getsanslke eftyekgghv vlipefslpl
      181 eyylipflii vgiclilivi fmitkfvqdr hrarrnrlrk dqlkklpvhk fkkgdeydvc
      241 aicldeyedg dklrilpcsh ayhckcvdpw ltktkktcpv ckqkvvpsqg dsdsetdssq
      301 eenevsentp llrplasvst qsfgalsesh shqnmtesse yeeddndnvd ssdaengmne
      361 esvvvqlqps edreyrvant v
//
LOCUS       XP_041323712             381 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF13 [Pyrgilauda ruficollis].
ACCESSION   XP_041323712
VERSION     XP_041323712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="E3 ubiquitin-protein ligase RNF13"
                     /calculated_mol_wt=42615
     Region          23..180
                     /region_name="PA_C_RZF_like"
                     /note="PA_C-RZF_ like: Protease-associated (PA) domain
                     C_RZF-like. This group includes various PA
                     domain-containing proteins similar to C-RZF (chicken
                     embryo RING zinc finger) protein. These proteins contain a
                     C3H2C3 RING finger. C-RZF is expressed in embryo...;
                     cd02123"
                     /db_xref="CDD:239038"
     Site            130..132
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239038"
     Region          230..288
                     /region_name="RING-H2_RNF13"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 13 (RNF13) and similar proteins; cd16796"
                     /db_xref="CDD:438450"
     Site            order(240,243,258,260,263,266,278,281)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438450"
     CDS             1..381
                     /gene="RNF13"
                     /coded_by="XM_041467778.1:120..1265"
                     /db_xref="GeneID:121353704"
ORIGIN      
        1 mllsigmlml satqiytivt vqlfaflnll pveadilayn lengtqtfdd lparfgyrlp
       61 aeglkgflin skpenacepi appplrdnss gafivlirrl ecnfdvkvln aqragykaai
      121 vhnvdsddli smgsndievl kkidipsvfi getsanslke eftyekgghv vlipefslpl
      181 eyylipflii vgiclilivi fmitkfvqdr hrarrnrlrk dqlkklpvhk fkkgdeydvc
      241 aicldeyedg dklrilpcsh ayhckcvdpw ltktkktcpv ckqkvvpsqg dsdsetdssq
      301 eenevsentp llrplasvst qsfgalsesh shqnmtesse yeeddndnvd ssdaengmne
      361 esvvvqlqps edreyrvant v
//
LOCUS       XP_041323713             381 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF13 [Pyrgilauda ruficollis].
ACCESSION   XP_041323713
VERSION     XP_041323713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467779.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="E3 ubiquitin-protein ligase RNF13"
                     /calculated_mol_wt=42615
     Region          23..180
                     /region_name="PA_C_RZF_like"
                     /note="PA_C-RZF_ like: Protease-associated (PA) domain
                     C_RZF-like. This group includes various PA
                     domain-containing proteins similar to C-RZF (chicken
                     embryo RING zinc finger) protein. These proteins contain a
                     C3H2C3 RING finger. C-RZF is expressed in embryo...;
                     cd02123"
                     /db_xref="CDD:239038"
     Site            130..132
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239038"
     Region          230..288
                     /region_name="RING-H2_RNF13"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 13 (RNF13) and similar proteins; cd16796"
                     /db_xref="CDD:438450"
     Site            order(240,243,258,260,263,266,278,281)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:438450"
     CDS             1..381
                     /gene="RNF13"
                     /coded_by="XM_041467779.1:151..1296"
                     /db_xref="GeneID:121353704"
ORIGIN      
        1 mllsigmlml satqiytivt vqlfaflnll pveadilayn lengtqtfdd lparfgyrlp
       61 aeglkgflin skpenacepi appplrdnss gafivlirrl ecnfdvkvln aqragykaai
      121 vhnvdsddli smgsndievl kkidipsvfi getsanslke eftyekgghv vlipefslpl
      181 eyylipflii vgiclilivi fmitkfvqdr hrarrnrlrk dqlkklpvhk fkkgdeydvc
      241 aicldeyedg dklrilpcsh ayhckcvdpw ltktkktcpv ckqkvvpsqg dsdsetdssq
      301 eenevsentp llrplasvst qsfgalsesh shqnmtesse yeeddndnvd ssdaengmne
      361 esvvvqlqps edreyrvant v
//
LOCUS       XP_041323714             140 aa            linear   VRT 06-MAY-2021
DEFINITION  profilin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323714
VERSION     XP_041323714.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467780.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..140
                     /product="profilin-2"
                     /calculated_mol_wt=14873
     Region          2..140
                     /region_name="PROF"
                     /note="Profilin; smart00392"
                     /db_xref="CDD:214646"
     Site            order(4,7,30,32,134,140)
                     /site_type="active"
                     /note="poly-proline binding site [active]"
                     /db_xref="CDD:238085"
     Site            order(60,74..75,77,89,94,120..122,126,130)
                     /site_type="other"
                     /note="actin interaction site [polypeptide binding]"
                     /db_xref="CDD:238085"
     Site            order(70,89)
                     /site_type="active"
                     /note="putative PIP2-interaction site [active]"
                     /db_xref="CDD:238085"
     CDS             1..140
                     /gene="PFN2"
                     /coded_by="XM_041467780.1:116..538"
                     /db_xref="GeneID:121353706"
ORIGIN      
        1 magwqsyvdn lmcdgccqea aivgycdaky vwaataggif qsitpgeidm ivgkdregff
       61 tngltlgakk csvirdslyv dgdctmdirt ksqggeptyn vavgragrvl vfvmgkegvh
      121 ggglnkkays makylrdsgf
//
LOCUS       XP_041323715             299 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323715
VERSION     XP_041323715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="zinc finger matrin-type protein 3 isoform X1"
                     /calculated_mol_wt=33005
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          252..286
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..299
                     /gene="ZMAT3"
                     /coded_by="XM_041467781.1:392..1291"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg npgfsvgspg pyfnprsrqr
      241 iprdlamcvt psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323717             299 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323717
VERSION     XP_041323717.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467783.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="zinc finger matrin-type protein 3 isoform X1"
                     /calculated_mol_wt=33005
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          252..286
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..299
                     /gene="ZMAT3"
                     /coded_by="XM_041467783.1:249..1148"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg npgfsvgspg pyfnprsrqr
      241 iprdlamcvt psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323718             299 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323718
VERSION     XP_041323718.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467784.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="zinc finger matrin-type protein 3 isoform X1"
                     /calculated_mol_wt=33005
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          252..286
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..299
                     /gene="ZMAT3"
                     /coded_by="XM_041467784.1:1271..2170"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg npgfsvgspg pyfnprsrqr
      241 iprdlamcvt psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323719             299 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323719
VERSION     XP_041323719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="zinc finger matrin-type protein 3 isoform X1"
                     /calculated_mol_wt=33005
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          252..286
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..299
                     /gene="ZMAT3"
                     /coded_by="XM_041467785.1:932..1831"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg npgfsvgspg pyfnprsrqr
      241 iprdlamcvt psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323720             299 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323720
VERSION     XP_041323720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467786.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="zinc finger matrin-type protein 3 isoform X1"
                     /calculated_mol_wt=33005
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          252..286
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..299
                     /gene="ZMAT3"
                     /coded_by="XM_041467786.1:196..1095"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg npgfsvgspg pyfnprsrqr
      241 iprdlamcvt psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323721             299 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323721
VERSION     XP_041323721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="zinc finger matrin-type protein 3 isoform X1"
                     /calculated_mol_wt=33005
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          252..286
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..299
                     /gene="ZMAT3"
                     /coded_by="XM_041467787.1:196..1095"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg npgfsvgspg pyfnprsrqr
      241 iprdlamcvt psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323722             299 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323722
VERSION     XP_041323722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="zinc finger matrin-type protein 3 isoform X1"
                     /calculated_mol_wt=33005
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          252..286
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..299
                     /gene="ZMAT3"
                     /coded_by="XM_041467788.1:196..1095"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg npgfsvgspg pyfnprsrqr
      241 iprdlamcvt psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323723             289 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger matrin-type protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323723
VERSION     XP_041323723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="zinc finger matrin-type protein 3 isoform X2"
                     /calculated_mol_wt=32106
     Region          67..101
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          72..94
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Site            order(79..81,83..84,88,93,154,157..161,163..164)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275371"
     Region          144..177
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     Region          149..171
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          242..276
                     /region_name="ZnF_U1"
                     /note="U1-like zinc finger; smart00451"
                     /db_xref="CDD:197732"
     CDS             1..289
                     /gene="ZMAT3"
                     /coded_by="XM_041467789.1:191..1060"
                     /db_xref="GeneID:121353708"
ORIGIN      
        1 millqqagll phpekpsslp msvatrpras splsppkslg lgpsfhhtqe eelakvveqd
       61 pmleelckpl ccklcnvtln saqqaqahyq gknhskklrn yyaanscpap armsnsvepa
      121 ppqvvslptq mgsskpggrv ilatendyck lcdasfsspa vaqahyqgkn hakrlrlaea
      181 qnnsfsdase lgkrrarkeg neykmmqnrr ntyavqnntg pyfnprsrqr iprdlamcvt
      241 psgqfycsmc nagaseelef rqhleskqhk skvseqryrn emenlgyvq
//
LOCUS       XP_041323724             563 aa            linear   VRT 06-MAY-2021
DEFINITION  intestinal-type alkaline phosphatase-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323724
VERSION     XP_041323724.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467790.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..563
                     /product="intestinal-type alkaline phosphatase-like
                     isoform X1"
                     /calculated_mol_wt=60307
     Region          63..522
                     /region_name="Alk_phosphatase"
                     /note="Alkaline phosphatase; pfam00245"
                     /db_xref="CDD:395188"
     Site            order(72,146..147,210,221,365,370,374,411..412,486)
                     /site_type="active"
                     /db_xref="CDD:293736"
     Site            order(72,146..147,221,370,374,412,486)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293736"
     Site            order(76..77,80,83..84,107..109,111,138,140,144,157..159,
                     169,184,485,487..490,492,502,504..508,510..511,514)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293736"
     CDS             1..563
                     /gene="LOC121353709"
                     /coded_by="XM_041467790.1:553..2244"
                     /db_xref="GeneID:121353709"
ORIGIN      
        1 mgqllfsgtc lllcflaqla taasgdreha gqwdaektpg ywnkgarkrl elalalqpaa
       61 qrakniilfm gdgmglstms aariykgqla ggsgeesvla metfphmala kvsgaglggt
      121 lllplletpl hpscfqtyti drqvpdsagt gtaylcgvka naktlglsga avygkchttf
      181 gnevdsvlhr arlagksvgi vtttrvqhas pgaayahsas rgwyadanmp kealrdgckd
      241 iayqlvhntd invilgggrm ymtpkqtpdp eypedpdqng trkdgrdlia ewlsakqgar
      301 yvwdkkglda vrddsvshlm glfepkdmky elnrntstdp sivemtekai rilrrnpngf
      361 flfveggrid hghhsgrakq almeavmldr avaragelts padtltvvta dhshvftfgg
      421 stprgnsifg lapkkakdkr aytsilygng pgysirdgar paaslpvaed kdyrqqaavp
      481 letethsged vvvlaqgpma qlfhgvqeqh yiahamayaa clepyaaepg craarrashg
      541 trccpqallv llalcmaalt vrg
//
LOCUS       XP_041323725             538 aa            linear   VRT 06-MAY-2021
DEFINITION  intestinal-type alkaline phosphatase-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323725
VERSION     XP_041323725.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467791.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..538
                     /product="intestinal-type alkaline phosphatase-like
                     isoform X2"
                     /calculated_mol_wt=57804
     Region          63..497
                     /region_name="Alk_phosphatase"
                     /note="Alkaline phosphatase; pfam00245"
                     /db_xref="CDD:395188"
     Site            order(72,121..122,185,196,340,345,349,386..387,461)
                     /site_type="active"
                     /db_xref="CDD:293736"
     Site            order(72,121..122,196,345,349,387,461)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293736"
     Site            order(76..77,80,83..84,107..109,111,113,115,119,132..134,
                     144,159,460,462..465,467,477,479..483,485..486,489)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293736"
     CDS             1..538
                     /gene="LOC121353709"
                     /coded_by="XM_041467791.1:553..2169"
                     /db_xref="GeneID:121353709"
ORIGIN      
        1 mgqllfsgtc lllcflaqla taasgdreha gqwdaektpg ywnkgarkrl elalalqpaa
       61 qrakniilfm gdgmglstms aariykgqla ggsgeesvla metfphmala ktytidrqvp
      121 dsagtgtayl cgvkanaktl glsgaavygk chttfgnevd svlhrarlag ksvgivtttr
      181 vqhaspgaay ahsasrgwya danmpkealr dgckdiayql vhntdinvil gggrmymtpk
      241 qtpdpeyped pdqngtrkdg rdliaewlsa kqgaryvwdk kgldavrdds vshlmglfep
      301 kdmkyelnrn tstdpsivem tekairilrr npngfflfve ggridhghhs grakqalmea
      361 vmldravara geltspadtl tvvtadhshv ftfggstprg nsifglapkk akdkraytsi
      421 lygngpgysi rdgarpaasl pvaedkdyrq qaavpletet hsgedvvvla qgpmaqlfhg
      481 vqeqhyiaha mayaaclepy aaepgcraar rashgtrccp qallvllalc maaltvrg
//
LOCUS       XP_041323726             712 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-binding cassette sub-family F member 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323726
VERSION     XP_041323726.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467792.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..712
                     /product="ATP-binding cassette sub-family F member 3"
                     /calculated_mol_wt=80118
     Region          6..703
                     /region_name="PLN03073"
                     /note="ABC transporter F family; Provisional"
                     /db_xref="CDD:215558"
     CDS             1..712
                     /gene="ABCF3"
                     /coded_by="XM_041467792.1:85..2223"
                     /db_xref="GeneID:121353711"
ORIGIN      
        1 mascadilrs efpdldgelf ayvtgilhgs gadfesvdel eeavgellre vsqdtkddga
       61 ireicqrlfn tlqldegqaq rcsqvlldap iqlsqitdgy gdasadllpg lllkrgqtsm
      121 vnakklekae arlkakqdkr lerdslkssg pvvleeasas qasskketrm essgknksyd
      181 vrienfdvsf gervlltgad lnlafgrryg lvgrnglgkt tllkmiasqs lripshisil
      241 hveqevagde tpalqsvlec dttrerllre erdltakiss grgegtegar lseiyaklee
      301 ieadkapara svilaglgfn akmqqqttke fsggwrmrla laralfarpd lllldeptnm
      361 ldvrailwle sylqtwqsti lvvshdrnfl navatdiihl hsqrldmyrg dfenfmkike
      421 erlknqqrey eaqqqyrehi qvfidrfryn anrasqvqsk lklleklpvl kpvdkesevi
      481 irfpdgfekf sppilqldev dfyyepshyi fhslsvsadl esricvvgen gagkstmlki
      541 lmgelapvrg irhahrnlki gyfsqhhvdq ldlnisavel larkfpgkte eeyrhqlgsy
      601 gisgelavrp vaslsggqks rvafaqmtmp cpnfyildep tnhldmetie alakalnkfr
      661 ggiilvshde rfirlvcqel wvcenatvtr ieggfdqyrd ilkeqfrkeg fl
//
LOCUS       XP_041323727             731 aa            linear   VRT 06-MAY-2021
DEFINITION  segment polarity protein dishevelled homolog DVL-3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323727
VERSION     XP_041323727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..731
                     /product="segment polarity protein dishevelled homolog
                     DVL-3 isoform X1"
                     /calculated_mol_wt=79872
     Region          3..84
                     /region_name="DAX"
                     /note="Domain present in Dishevelled and axin; smart00021"
                     /db_xref="CDD:197474"
     Region          89..246
                     /region_name="Dishevelled"
                     /note="Dishevelled specific domain; pfam02377"
                     /db_xref="CDD:460544"
     Region          250..336
                     /region_name="PDZ_Dishevelled-like"
                     /note="PDZ domain of segment polarity protein dishevelled
                     homolog DVL1, DVL2, DVL3, and related domains; cd06717"
                     /db_xref="CDD:467201"
     Site            order(260..266,280,283,313,317,320..321)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467201"
     Region          431..514
                     /region_name="DEP_dishevelled"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in dishevelled-like proteins. Dishevelled-like
                     proteins play a key role in the transduction of the Wnt
                     signal from the cell surface to the nucleus, which in turn
                     is an important regulatory pathway...; cd04438"
                     /db_xref="CDD:239885"
     Region          518..719
                     /region_name="Dsh_C"
                     /note="Segment polarity protein dishevelled (Dsh) C
                     terminal; pfam12316"
                     /db_xref="CDD:463531"
     CDS             1..731
                     /gene="DVL3"
                     /coded_by="XM_041467793.1:186..2381"
                     /db_xref="GeneID:121353712"
ORIGIN      
        1 maaaetkiiy hldeqetpyl vklpipaerv tlgdfkglln rpnykfyfks mdddfgvvke
       61 eisddnaklp cfngrvvswl vsaegshsda gsvcadnqte lppsmertgg igdsrppsfh
      121 pntggsrenl dnetetdsvv ssqrerprrt dgpehaprvn gtvkgerrrd lggyessstl
      181 msselettsf fdsdeddsts rfsssteqss asrlmrrhkr rrrkqkapri ersssfssit
      241 dstmslniit vtlnmekynf lgisivgqsn ergdggiyig simkggavaa dgriepgdml
      301 lqvndinfen msnddavrvl reivhkpgpi tltvakcwdp sprgcfslpr iapqriwagp
      361 dspcsdpgep irpidpaawv shtaamtgty paygmspsms titstsssit ssipeterld
      421 dfhlsihsdm ativkamasp esglevrdrm wlkitipnaf igsdvvdwly hhvegftdrr
      481 esrkyasnll kagyirhtvn kitfseqcyy ifgdlcgnma nlslhdhdgs sgasdqdtla
      541 plphpgaapw pmafpyqypp phpynphpgf pdpgysyggg sagsqhsegs rssgsnrsgs
      601 errkerektg esksggsgse sdhttrssmr reraasersv pasqhsqrsq hslahsirsh
      661 hsqqsygppg lpplfsppml lmppppsamg ppgappgrdl asvppeltas rqsfrmamgn
      721 ptknygvfdf l
//
LOCUS       XP_041323728             714 aa            linear   VRT 06-MAY-2021
DEFINITION  segment polarity protein dishevelled homolog DVL-3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323728
VERSION     XP_041323728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..714
                     /product="segment polarity protein dishevelled homolog
                     DVL-3 isoform X2"
                     /calculated_mol_wt=78110
     Region          3..84
                     /region_name="DAX"
                     /note="Domain present in Dishevelled and axin; smart00021"
                     /db_xref="CDD:197474"
     Region          89..246
                     /region_name="Dishevelled"
                     /note="Dishevelled specific domain; pfam02377"
                     /db_xref="CDD:460544"
     Region          250..336
                     /region_name="PDZ_Dishevelled-like"
                     /note="PDZ domain of segment polarity protein dishevelled
                     homolog DVL1, DVL2, DVL3, and related domains; cd06717"
                     /db_xref="CDD:467201"
     Site            order(260..266,280,283,313,317,320..321)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467201"
     Region          414..497
                     /region_name="DEP_dishevelled"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in dishevelled-like proteins. Dishevelled-like
                     proteins play a key role in the transduction of the Wnt
                     signal from the cell surface to the nucleus, which in turn
                     is an important regulatory pathway...; cd04438"
                     /db_xref="CDD:239885"
     Region          501..702
                     /region_name="Dsh_C"
                     /note="Segment polarity protein dishevelled (Dsh) C
                     terminal; pfam12316"
                     /db_xref="CDD:463531"
     CDS             1..714
                     /gene="DVL3"
                     /coded_by="XM_041467794.1:187..2331"
                     /db_xref="GeneID:121353712"
ORIGIN      
        1 maaaetkiiy hldeqetpyl vklpipaerv tlgdfkglln rpnykfyfks mdddfgvvke
       61 eisddnaklp cfngrvvswl vsaegshsda gsvcadnqte lppsmertgg igdsrppsfh
      121 pntggsrenl dnetetdsvv ssqrerprrt dgpehaprvn gtvkgerrrd lggyessstl
      181 msselettsf fdsdeddsts rfsssteqss asrlmrrhkr rrrkqkapri ersssfssit
      241 dstmslniit vtlnmekynf lgisivgqsn ergdggiyig simkggavaa dgriepgdml
      301 lqvndinfen msnddavrvl reivhkpgpi tltvakcwdp sprgcfslpr sepirpidpa
      361 awvshtaamt gtypaygmsp smstitstss sitssipete rlddfhlsih sdmativkam
      421 aspesglevr drmwlkitip nafigsdvvd wlyhhvegft drresrkyas nllkagyirh
      481 tvnkitfseq cyyifgdlcg nmanlslhdh dgssgasdqd tlaplphpga apwpmafpyq
      541 yppphpynph pgfpdpgysy gggsagsqhs egsrssgsnr sgserrkere ktgesksggs
      601 gsesdhttrs smrreraase rsvpasqhsq rsqhslahsi rshhsqqsyg ppglpplfsp
      661 pmllmpppps amgppgappg rdlasvppel tasrqsfrma mgnptknygv fdfl
//
LOCUS       XP_041323729             712 aa            linear   VRT 06-MAY-2021
DEFINITION  segment polarity protein dishevelled homolog DVL-3 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323729
VERSION     XP_041323729.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467795.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..712
                     /product="segment polarity protein dishevelled homolog
                     DVL-3 isoform X3"
                     /calculated_mol_wt=77880
     Region          3..84
                     /region_name="DAX"
                     /note="Domain present in Dishevelled and axin; smart00021"
                     /db_xref="CDD:197474"
     Region          89..246
                     /region_name="Dishevelled"
                     /note="Dishevelled specific domain; pfam02377"
                     /db_xref="CDD:460544"
     Region          250..336
                     /region_name="PDZ_Dishevelled-like"
                     /note="PDZ domain of segment polarity protein dishevelled
                     homolog DVL1, DVL2, DVL3, and related domains; cd06717"
                     /db_xref="CDD:467201"
     Site            order(260..266,280,283,313,317,320..321)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467201"
     Region          414..497
                     /region_name="DEP_dishevelled"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in dishevelled-like proteins. Dishevelled-like
                     proteins play a key role in the transduction of the Wnt
                     signal from the cell surface to the nucleus, which in turn
                     is an important regulatory pathway...; cd04438"
                     /db_xref="CDD:239885"
     Region          501..702
                     /region_name="Dsh_C"
                     /note="Segment polarity protein dishevelled (Dsh) C
                     terminal; pfam12316"
                     /db_xref="CDD:463531"
     CDS             1..712
                     /gene="DVL3"
                     /coded_by="XM_041467795.1:187..2325"
                     /db_xref="GeneID:121353712"
ORIGIN      
        1 maaaetkiiy hldeqetpyl vklpipaerv tlgdfkglln rpnykfyfks mdddfgvvke
       61 eisddnaklp cfngrvvswl vsaegshsda gsvcadnqte lppsmertgg igdsrppsfh
      121 pntggsrenl dnetetdsvv ssqrerprrt dgpehaprvn gtvkgerrrd lggyessstl
      181 msselettsf fdsdeddsts rfsssteqss asrlmrrhkr rrrkqkapri ersssfssit
      241 dstmslniit vtlnmekynf lgisivgqsn ergdggiyig simkggavaa dgriepgdml
      301 lqvndinfen msnddavrvl reivhkpgpi tltvakcwdp sprgcfslpr sepirpidpa
      361 awvshtaamt gtypaygmsp smstitstss sitssipete rlddfhlsih sdmativkam
      421 aspesglevr drmwlkitip nafigsdvvd wlyhhvegft drresrkyas nllkagyirh
      481 tvnkitfseq cyyifgdlcg nmanlslhdh dgssgasdqd tlaplphpga apwpmafpyq
      541 yppphpynph pgfpdpgysy gggsagsqhs egsrssgsnr sgserrkere ktgesksggs
      601 gsesdhttrs smrreraase rsvpasqhsq rsqhslahsi rshhsqqsyg ppglpplfsp
      661 pmllmpppps amgppgappg rdlasvppel tasrqsfrma mgnpseffvd vm
//
LOCUS       XP_041323730             627 aa            linear   VRT 06-MAY-2021
DEFINITION  segment polarity protein dishevelled homolog DVL-3 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323730
VERSION     XP_041323730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="segment polarity protein dishevelled homolog
                     DVL-3 isoform X4"
                     /calculated_mol_wt=68337
     Region          1..142
                     /region_name="Dishevelled"
                     /note="Dishevelled specific domain; pfam02377"
                     /db_xref="CDD:460544"
     Region          146..232
                     /region_name="PDZ_Dishevelled-like"
                     /note="PDZ domain of segment polarity protein dishevelled
                     homolog DVL1, DVL2, DVL3, and related domains; cd06717"
                     /db_xref="CDD:467201"
     Site            order(156..162,176,179,209,213,216..217)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467201"
     Region          327..410
                     /region_name="DEP_dishevelled"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in dishevelled-like proteins. Dishevelled-like
                     proteins play a key role in the transduction of the Wnt
                     signal from the cell surface to the nucleus, which in turn
                     is an important regulatory pathway...; cd04438"
                     /db_xref="CDD:239885"
     Region          414..615
                     /region_name="Dsh_C"
                     /note="Segment polarity protein dishevelled (Dsh) C
                     terminal; pfam12316"
                     /db_xref="CDD:463531"
     CDS             1..627
                     /gene="DVL3"
                     /coded_by="XM_041467796.1:180..2063"
                     /db_xref="GeneID:121353712"
ORIGIN      
        1 mertggigds rppsfhpntg gsrenldnet etdsvvssqr erprrtdgpe haprvngtvk
       61 gerrrdlggy essstlmsse lettsffdsd eddstsrfss steqssasrl mrrhkrrrrk
      121 qkaprierss sfssitdstm slniitvtln mekynflgis ivgqsnergd ggiyigsimk
      181 ggavaadgri epgdmllqvn dinfenmsnd davrvlreiv hkpgpitltv akcwdpsprg
      241 cfslpriapq riwagpdspc sdpgepirpi dpaawvshta amtgtypayg mspsmstits
      301 tsssitssip eterlddfhl sihsdmativ kamaspesgl evrdrmwlki tipnafigsd
      361 vvdwlyhhve gftdrresrk yasnllkagy irhtvnkitf seqcyyifgd lcgnmanlsl
      421 hdhdgssgas dqdtlaplph pgaapwpmaf pyqyppphpy nphpgfpdpg ysygggsags
      481 qhsegsrssg snrsgserrk erektgesks ggsgsesdht trssmrrera asersvpasq
      541 hsqrsqhsla hsirshhsqq sygppglppl fsppmllmpp ppsamgppga ppgrdlasvp
      601 peltasrqsf rmamgnptkn ygvfdfl
//
LOCUS       XP_041323731             437 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-2 complex subunit mu isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323731
VERSION     XP_041323731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467797.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..437
                     /product="AP-2 complex subunit mu isoform X1"
                     /calculated_mol_wt=49794
     Region          1..142
                     /region_name="AP2_Mu_N"
                     /note="AP-2 complex subunit mu N-terminal domain; cd14836"
                     /db_xref="CDD:341440"
     Site            order(1,18..19,21..22,47..51,54,56,58,60,62,73..79,81..83,
                     85..86,107,111..112,115..116,119..120,122..125,127,
                     133..134,136..138)
                     /site_type="other"
                     /note="AP2 beta interface [polypeptide binding]"
                     /db_xref="CDD:341440"
     Region          170..436
                     /region_name="AP-2_Mu2_Cterm"
                     /note="C-terminal domain of medium Mu2 subunit in
                     ubiquitously expressed clathrin-associated adaptor protein
                     (AP) complex AP-2; cd09251"
                     /db_xref="CDD:271159"
     Site            order(176..178,205,320,393,395,403..404,422..425,427)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271159"
     Site            order(194..195,247..252,256..257,278,280,384,386,432,434)
                     /site_type="other"
                     /note="AP-2 beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:271159"
     CDS             1..437
                     /gene="AP2M1"
                     /coded_by="XM_041467797.1:156..1469"
                     /db_xref="GeneID:121353713"
ORIGIN      
        1 migglfiynh kgevlisrvy rddignrrna vdafrvnvih arqqvrspvt niartsffhv
       61 krsniwlaav tkqnvnaamv feflykmcdv mtayfgkise eniknnfvli yelldeildf
      121 gypqnsetga lktfitqqgi ksqhqtkeeq sqitsqvtgq igwrregiky rrnelfldvl
      181 esvnllmspq gqvlsahvsg rvvmksylsg mpeckfgmnd kiviekqgkg tadetgksgk
      241 qsiaiddctf hqcvrlskfd sersisfipp dgefelmryr ttkdiilpfr viplvrevgr
      301 tklevkvvik snfkpsllaq kievriptpl ntsgvqvicm kgkakykase naivwkikrm
      361 agmkesqisa eiellptndk kkwarppism nfevpfapsg lkvrylkvfe pklnysdhdv
      421 ikwvryigrs giyetrc
//
LOCUS       XP_041323732             435 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-2 complex subunit mu isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323732
VERSION     XP_041323732.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467798.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..435
                     /product="AP-2 complex subunit mu isoform X2"
                     /calculated_mol_wt=49524
     Region          1..140
                     /region_name="AP2_Mu_N"
                     /note="AP-2 complex subunit mu N-terminal domain; cd14836"
                     /db_xref="CDD:341440"
     Site            order(1,18..19,21..22,45..49,52,54,56,58,60,71..77,79..81,
                     83..84,105,109..110,113..114,117..118,120..123,125,
                     131..132,134..136)
                     /site_type="other"
                     /note="AP2 beta interface [polypeptide binding]"
                     /db_xref="CDD:341440"
     Region          168..434
                     /region_name="AP-2_Mu2_Cterm"
                     /note="C-terminal domain of medium Mu2 subunit in
                     ubiquitously expressed clathrin-associated adaptor protein
                     (AP) complex AP-2; cd09251"
                     /db_xref="CDD:271159"
     Site            order(174..176,203,318,391,393,401..402,420..423,425)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271159"
     Site            order(192..193,245..250,254..255,276,278,382,384,430,432)
                     /site_type="other"
                     /note="AP-2 beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:271159"
     CDS             1..435
                     /gene="AP2M1"
                     /coded_by="XM_041467798.1:156..1463"
                     /db_xref="GeneID:121353713"
ORIGIN      
        1 migglfiynh kgevlisrvy rddigrnavd afrvnvihar qqvrspvtni artsffhvkr
       61 sniwlaavtk qnvnaamvfe flykmcdvmt ayfgkiseen iknnfvliye lldeildfgy
      121 pqnsetgalk tfitqqgiks qhqtkeeqsq itsqvtgqig wrregikyrr nelfldvles
      181 vnllmspqgq vlsahvsgrv vmksylsgmp eckfgmndki viekqgkgta detgksgkqs
      241 iaiddctfhq cvrlskfdse rsisfippdg efelmryrtt kdiilpfrvi plvrevgrtk
      301 levkvviksn fkpsllaqki evriptplnt sgvqvicmkg kakykasena ivwkikrmag
      361 mkesqisaei ellptndkkk warppismnf evpfapsglk vrylkvfepk lnysdhdvik
      421 wvryigrsgi yetrc
//
LOCUS       XP_041323733             435 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-2 complex subunit mu isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323733
VERSION     XP_041323733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..435
                     /product="AP-2 complex subunit mu isoform X3"
                     /calculated_mol_wt=49529
     Region          1..142
                     /region_name="AP2_Mu_N"
                     /note="AP-2 complex subunit mu N-terminal domain; cd14836"
                     /db_xref="CDD:341440"
     Site            order(1,18..19,21..22,47..51,54,56,58,60,62,73..79,81..83,
                     85..86,107,111..112,115..116,119..120,122..125,127,
                     133..134,136..138)
                     /site_type="other"
                     /note="AP2 beta interface [polypeptide binding]"
                     /db_xref="CDD:341440"
     Region          168..434
                     /region_name="AP-2_Mu2_Cterm"
                     /note="C-terminal domain of medium Mu2 subunit in
                     ubiquitously expressed clathrin-associated adaptor protein
                     (AP) complex AP-2; cd09251"
                     /db_xref="CDD:271159"
     Site            order(174..176,203,318,391,393,401..402,420..423,425)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271159"
     Site            order(192..193,245..250,254..255,276,278,382,384,430,432)
                     /site_type="other"
                     /note="AP-2 beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:271159"
     CDS             1..435
                     /gene="AP2M1"
                     /coded_by="XM_041467799.1:156..1463"
                     /db_xref="GeneID:121353713"
ORIGIN      
        1 migglfiynh kgevlisrvy rddignrrna vdafrvnvih arqqvrspvt niartsffhv
       61 krsniwlaav tkqnvnaamv feflykmcdv mtayfgkise eniknnfvli yelldeildf
      121 gypqnsetga lktfitqqgi ksqtkeeqsq itsqvtgqig wrregikyrr nelfldvles
      181 vnllmspqgq vlsahvsgrv vmksylsgmp eckfgmndki viekqgkgta detgksgkqs
      241 iaiddctfhq cvrlskfdse rsisfippdg efelmryrtt kdiilpfrvi plvrevgrtk
      301 levkvviksn fkpsllaqki evriptplnt sgvqvicmkg kakykasena ivwkikrmag
      361 mkesqisaei ellptndkkk warppismnf evpfapsglk vrylkvfepk lnysdhdvik
      421 wvryigrsgi yetrc
//
LOCUS       XP_041323734             433 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-2 complex subunit mu isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323734
VERSION     XP_041323734.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467800.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..433
                     /product="AP-2 complex subunit mu isoform X4"
                     /calculated_mol_wt=49258
     Region          1..140
                     /region_name="AP2_Mu_N"
                     /note="AP-2 complex subunit mu N-terminal domain; cd14836"
                     /db_xref="CDD:341440"
     Site            order(1,18..19,21..22,45..49,52,54,56,58,60,71..77,79..81,
                     83..84,105,109..110,113..114,117..118,120..123,125,
                     131..132,134..136)
                     /site_type="other"
                     /note="AP2 beta interface [polypeptide binding]"
                     /db_xref="CDD:341440"
     Region          166..432
                     /region_name="AP-2_Mu2_Cterm"
                     /note="C-terminal domain of medium Mu2 subunit in
                     ubiquitously expressed clathrin-associated adaptor protein
                     (AP) complex AP-2; cd09251"
                     /db_xref="CDD:271159"
     Site            order(172..174,201,316,389,391,399..400,418..421,423)
                     /site_type="signal peptide"
                     /note="signal peptide binding site [polypeptide binding]"
                     /db_xref="CDD:271159"
     Site            order(190..191,243..248,252..253,274,276,380,382,428,430)
                     /site_type="other"
                     /note="AP-2 beta subunit interface [polypeptide binding]"
                     /db_xref="CDD:271159"
     CDS             1..433
                     /gene="AP2M1"
                     /coded_by="XM_041467800.1:156..1457"
                     /db_xref="GeneID:121353713"
ORIGIN      
        1 migglfiynh kgevlisrvy rddigrnavd afrvnvihar qqvrspvtni artsffhvkr
       61 sniwlaavtk qnvnaamvfe flykmcdvmt ayfgkiseen iknnfvliye lldeildfgy
      121 pqnsetgalk tfitqqgiks qtkeeqsqit sqvtgqigwr regikyrrne lfldvlesvn
      181 llmspqgqvl sahvsgrvvm ksylsgmpec kfgmndkivi ekqgkgtade tgksgkqsia
      241 iddctfhqcv rlskfdsers isfippdgef elmryrttkd iilpfrvipl vrevgrtkle
      301 vkvviksnfk psllaqkiev riptplntsg vqvicmkgka kykasenaiv wkikrmagmk
      361 esqisaeiel lptndkkkwa rppismnfev pfapsglkvr ylkvfepkln ysdhdvikwv
      421 ryigrsgiye trc
//
LOCUS       XP_041323735             863 aa            linear   VRT 06-MAY-2021
DEFINITION  neuroligin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323735
VERSION     XP_041323735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..863
                     /product="neuroligin-1 isoform X1"
                     /calculated_mol_wt=96429
     Region          53..646
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(221..223,300..302,305,453,457..458,500,546,549)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(301,431,545)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..863
                     /gene="NLGN1"
                     /coded_by="XM_041467801.1:718..3309"
                     /db_xref="GeneID:121353714"
ORIGIN      
        1 mafprsmwln cvwratvvrl lhtglnatfa fsilgfllha aavssqkldd tnpvvttnfg
       61 kirgikkeln neilgpviqf lgvpyaappt gerrfqppep pspwadvknt tqfapvcpqn
      121 iiegrlpevm lpvwftnnld vvstyvqdqn edclylniyv ptedvkrisk ecarkpgkki
      181 crkggpltkk qtddlgdndg aededirdsg gpkpvmvyih ggsymegtgn lydgsvlasy
      241 gnvivitvny rlgvlgflst gdqaakgnyg lldliqalrw tsenigffgg dplritvfgs
      301 gaggscvnll tlshysegnr wsnstkglfq raiaqsgtal sswavsfqpa kyarmlatkv
      361 gcnmsdtvel veclqkkpyr elvdqdiqpa ryhiafgpvi dgdvipddpq ilmeqgefln
      421 ydimlgvnqg eglkfveniv dsedgisasd fdfavsnfvd nlygypegkd ilretikfmy
      481 tdwadrhnpe trrktllalf tdhqwvapav atadlhsnfg sptyfyafyh hcqtdqvpaw
      541 adaahgdevp yvlgipmigp telfpcnfsk ndvmlsavvm tywtnfaktg dpnqpvpqdt
      601 kfihtkpnrf eevawtrysq kdqlylhigl kprvkehyra nkvnlwlelv phlhnlndis
      661 qytstttkvp stdntfrptr knsvsvtsaf ptakqddpkq qpspfsvdqr dystelsvti
      721 avgasllfln ilafaalyyk kdkrrhdvhr rcspqrtttn dlthaqeeei mslqmkhtdl
      781 dhecesihph evvlrtacpp dytlamrrsp ddiplmtpnt itmipntipg iqplhtfntf
      841 tggqnntlph phphphshst trv
//
LOCUS       XP_041323736             685 aa            linear   VRT 06-MAY-2021
DEFINITION  neuroligin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323736
VERSION     XP_041323736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..685
                     /product="neuroligin-1 isoform X2"
                     /calculated_mol_wt=76796
     Region          18..468
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(52..54,131..133,136,275,279..280,322,368,371)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(132,253,367)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     CDS             1..685
                     /gene="NLGN1"
                     /coded_by="XM_041467802.1:286..2343"
                     /db_xref="GeneID:121353714"
ORIGIN      
        1 mlpvwftnnl dvvstyvqdq nedclylniy vpteddirds ggpkpvmvyi hggsymegtg
       61 nlydgsvlas ygnvivitvn yrlgvlgfls tgdqaakgny glldliqalr wtsenigffg
      121 gdplritvfg sgaggscvnl ltlshysegl fqraiaqsgt alsswavsfq pakyarmlat
      181 kvgcnmsdtv elveclqkkp yrelvdqdiq paryhiafgp vidgdvipdd pqilmeqgef
      241 lnydimlgvn qgeglkfven ivdsedgisa sdfdfavsnf vdnlygypeg kdilretikf
      301 mytdwadrhn petrrktlla lftdhqwvap avatadlhsn fgsptyfyaf yhhcqtdqvp
      361 awadaahgde vpyvlgipmi gptelfpcnf skndvmlsav vmtywtnfak tgdpnqpvpq
      421 dtkfihtkpn rfeevawtry sqkdqlylhi glkprvkehy rankvnlwle lvphlhnlnd
      481 isqytstttk vpstdntfrp trknsvsvts afptakqddp kqqpspfsvd qrdystelsv
      541 tiavgasllf lnilafaaly ykkdkrrhdv hrrcspqrtt tndlthaqee eimslqmkht
      601 dldhecesih phevvlrtac ppdytlamrr spddiplmtp ntitmipnti pgiqplhtfn
      661 tftggqnntl phphphphsh sttrv
//
LOCUS       XP_041323737            1076 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipase D1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323737
VERSION     XP_041323737.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467803.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1076
                     /product="phospholipase D1"
                     /calculated_mol_wt=123486
     Region          80..1061
                     /region_name="PLN02866"
                     /note="phospholipase D"
                     /db_xref="CDD:215467"
     CDS             1..1076
                     /gene="PLD1"
                     /coded_by="XM_041467803.1:188..3418"
                     /db_xref="GeneID:121353715"
ORIGIN      
        1 mslraeshaa tstlkklaad msniiesldt relhvegeev dsevltdpkg tvcipfsaiy
       61 hthgfkepgt qtyltgcpvr vrvleverft stkkvpspnv ytielthgef vwhvkrkfkh
      121 fqefhrellr ykafvripip trshtvrrqs ikrgeprqmp slphtaestv reehfssrrk
      181 qledyltnil kmpmyrnyhg tmefvgvsql sfihdlgpkg iegfimkrsg ghripglncc
      241 gqgrmcyrws krwlvvkdsf lmymkpdsga isfvllvdke fnikigqket etkyglqidn
      301 lsrslilkcn syrhaqwwrq gidefirkhg kdfltehrfg syaavqentl akwyvnakwy
      361 fedvanamea akeeifitdw wlspeifmkr pvvegnrwrl dcilkrkaqq gvrifvmlyk
      421 evelalgins eyskrtlmhl hpnikvmrhp dhvsssvylw ahheklvivd qsvafvggid
      481 laygrwddde hrltdvgsvk raaaavksvs tanlaaaaes tervplqpqg lapeshlfer
      541 naddapdtsk mkgvgkpkkf srfsiykhlh khgvhhadsv ssidsessys tptrsqpnii
      601 qslrphlkmf hhhseskqgl aepredkgsi rslktgvgel lgetrfwhgk dycnfvfkdw
      661 vqldkpfadf idryttprmp whdissvvhg raardvarhf iqrwnftkim kpkyrslsyp
      721 fllpksqqta helkyqvpea vpatvqvirs aadwsagiky heesihkayi svienskhyi
      781 yienqffisc addkvvwnki gdaiaqrilk ahrenkrfrv yvvipllpgf egdistgggn
      841 alqaimhfny rtmcrgensi lgqlkaevgd kwinyisfcg lrtyaelegk lvteliyvhs
      901 klliaddntv iigsanindr smlgkrdsem aiivqdsdtv psvmdgqeys agrfaqslrl
      961 rcfrvvlggs dlnpehqdpv cdkffkevwi ataarnatif dkvfrclpsd qvnnltqlre
     1021 finkpkland dpvkaaeelk kirgflvqfp frfleeeyll psvgtkesmv pmevwt
//
LOCUS       XP_041323739             913 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ECT2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323739
VERSION     XP_041323739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..913
                     /product="protein ECT2 isoform X1"
                     /calculated_mol_wt=102996
     Region          176..251
                     /region_name="BRCT_Ect2_rpt1"
                     /note="first BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17733"
                     /db_xref="CDD:349365"
     Region          270..349
                     /region_name="BRCT_Ect2_rpt2"
                     /note="second BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17732"
                     /db_xref="CDD:349364"
     Site            order(280..283,285,302..303,315..316,318..322)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349364"
     Region          456..640
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(459,463,562,590..591,594..595,597..598,601..602,
                     605..606,609,635,639)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          631..804
                     /region_name="PH_Ect2"
                     /note="Epithelial cell transforming 2 (Ect2) pleckstrin
                     homology (PH) domain; cd01229"
                     /db_xref="CDD:269936"
     CDS             1..913
                     /gene="ECT2"
                     /coded_by="XM_041467805.1:1..2742"
                     /db_xref="GeneID:121353717"
ORIGIN      
        1 madsstlvse tgrslladss vldskiiets kenvfratvl dveeempqie trvvlvqeag
       61 kheellkale tikimevpvi kikesspdks eekliksiih meiktpyikt dtieelgdsd
      121 spefetifvv sdfqapifsn lcradcrvig ppvvlhcaqk geplpfscrp lycasmlnlv
      181 lcftgfrkkd elvklvtlvh hmggiirrdf sskvthlvan sthgdkfria vslgvpivka
      241 ewiykawekr neidfcaadd dfrnqfkvpp fqdcmlsflg fsddekanme emtemqgghy
      301 lpvgdercth lvveestvkd lpfeplkkly vvkqewfwgs iqmdarages mylfeksesp
      361 dfkksvslls lstpnsnrkr rrlketlaql tretdmspfp prkrpsaehs lsigslldis
      421 ntpesstang etpkscarps knstplplkq sarwqvakel yqtesnyvdi lttiiqlfqv
      481 plekegqlgg pilaqeeikt ifgsipdild vhtkikedle dlminwtesk sigdiilkys
      541 kdllktyppf vnffemsket itrcekqkpr fhaflkinqa kpecgrqsla ellirpvqrl
      601 psvalllndi kkhtaeenpd kitleraies lkevmthine dkrkteaqrq ffdvvyevdg
      661 cpanllsshr slvqrletva lgddlcdrge qvtlflfndc leiarkrhkv igafksphgh
      721 trppaslkhv vlmplsqikk vldiretedc qkafalvvrp ptelnnklls fqmttedpck
      781 edwlkmlcrh vantickada enliyiadpd svevntkdmd stlsrasrai kktskkvtra
      841 fsfsktpkra lrralmshsa tegrspssne sflgsrlsst sslasvpsps lvslpsifer
      901 rshtlsrstt hli
//
LOCUS       XP_041323740             882 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ECT2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323740
VERSION     XP_041323740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..882
                     /product="protein ECT2 isoform X2"
                     /calculated_mol_wt=99449
     Region          145..220
                     /region_name="BRCT_Ect2_rpt1"
                     /note="first BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17733"
                     /db_xref="CDD:349365"
     Region          239..318
                     /region_name="BRCT_Ect2_rpt2"
                     /note="second BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17732"
                     /db_xref="CDD:349364"
     Site            order(249..252,254,271..272,284..285,287..291)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349364"
     Region          425..609
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(428,432,531,559..560,563..564,566..567,570..571,
                     574..575,578,604,608)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          600..773
                     /region_name="PH_Ect2"
                     /note="Epithelial cell transforming 2 (Ect2) pleckstrin
                     homology (PH) domain; cd01229"
                     /db_xref="CDD:269936"
     CDS             1..882
                     /gene="ECT2"
                     /coded_by="XM_041467806.1:1..2649"
                     /db_xref="GeneID:121353717"
ORIGIN      
        1 madsstlvse tgrslladss vldskiiets kenvfratvl dveeempqie trvvlvqeag
       61 kheellkale eiktpyiktd tieelgdsds pefetifvvs dfqapifsnl cradcrvigp
      121 pvvlhcaqkg eplpfscrpl ycasmlnlvl cftgfrkkde lvklvtlvhh mggiirrdfs
      181 skvthlvans thgdkfriav slgvpivkae wiykawekrn eidfcaaddd frnqfkvppf
      241 qdcmlsflgf sddekanmee mtemqgghyl pvgdercthl vveestvkdl pfeplkklyv
      301 vkqewfwgsi qmdaragesm ylfeksespd fkksvsllsl stpnsnrkrr rlketlaqlt
      361 retdmspfpp rkrpsaehsl sigslldisn tpesstange tpkscarpsk nstplplkqs
      421 arwqvakely qtesnyvdil ttiiqlfqvp lekegqlggp ilaqeeikti fgsipdildv
      481 htkikedled lminwtesks igdiilkysk dllktyppfv nffemsketi trcekqkprf
      541 haflkinqak pecgrqslae llirpvqrlp svalllndik khtaeenpdk itleraiesl
      601 kevmthined krkteaqrqf fdvvyevdgc panllsshrs lvqrletval gddlcdrgeq
      661 vtlflfndcl eiarkrhkvi gafksphght rppaslkhvv lmplsqikkv ldiretedcq
      721 kafalvvrpp telnnkllsf qmttedpcke dwlkmlcrhv antickadae nliyiadpds
      781 vevntkdmds tlsrasraik ktskkvtraf sfsktpkral rralmshsat egrspssnes
      841 flgsrlssts slasvpspsl vslpsiferr shtlsrstth li
//
LOCUS       XP_041323741             881 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ECT2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323741
VERSION     XP_041323741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467807.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..881
                     /product="protein ECT2 isoform X3"
                     /calculated_mol_wt=99319
     Region          144..219
                     /region_name="BRCT_Ect2_rpt1"
                     /note="first BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17733"
                     /db_xref="CDD:349365"
     Region          238..317
                     /region_name="BRCT_Ect2_rpt2"
                     /note="second BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17732"
                     /db_xref="CDD:349364"
     Site            order(248..251,253,270..271,283..284,286..290)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349364"
     Region          424..608
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(427,431,530,558..559,562..563,565..566,569..570,
                     573..574,577,603,607)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          599..772
                     /region_name="PH_Ect2"
                     /note="Epithelial cell transforming 2 (Ect2) pleckstrin
                     homology (PH) domain; cd01229"
                     /db_xref="CDD:269936"
     CDS             1..881
                     /gene="ECT2"
                     /coded_by="XM_041467807.1:1..2646"
                     /db_xref="GeneID:121353717"
ORIGIN      
        1 madsstlvse tgrslladss vldskiiets kenvfratvl dveempqiet rvvlvqeagk
       61 heellkalee iktpyiktdt ieelgdsdsp efetifvvsd fqapifsnlc radcrvigpp
      121 vvlhcaqkge plpfscrply casmlnlvlc ftgfrkkdel vklvtlvhhm ggiirrdfss
      181 kvthlvanst hgdkfriavs lgvpivkaew iykawekrne idfcaadddf rnqfkvppfq
      241 dcmlsflgfs ddekanmeem temqgghylp vgdercthlv veestvkdlp feplkklyvv
      301 kqewfwgsiq mdaragesmy lfeksespdf kksvsllsls tpnsnrkrrr lketlaqltr
      361 etdmspfppr krpsaehsls igslldisnt pesstanget pkscarpskn stplplkqsa
      421 rwqvakelyq tesnyvdilt tiiqlfqvpl ekegqlggpi laqeeiktif gsipdildvh
      481 tkikedledl minwtesksi gdiilkyskd llktyppfvn ffemsketit rcekqkprfh
      541 aflkinqakp ecgrqslael lirpvqrlps valllndikk htaeenpdki tleraieslk
      601 evmthinedk rkteaqrqff dvvyevdgcp anllsshrsl vqrletvalg ddlcdrgeqv
      661 tlflfndcle iarkrhkvig afksphghtr ppaslkhvvl mplsqikkvl diretedcqk
      721 afalvvrppt elnnkllsfq mttedpcked wlkmlcrhva ntickadaen liyiadpdsv
      781 evntkdmdst lsrasraikk tskkvtrafs fsktpkralr ralmshsate grspssnesf
      841 lgsrlsstss lasvpspslv slpsiferrs htlsrstthl i
//
LOCUS       XP_041323742             853 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ECT2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323742
VERSION     XP_041323742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..853
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..853
                     /product="protein ECT2 isoform X4"
                     /calculated_mol_wt=96441
     Region          145..220
                     /region_name="BRCT_Ect2_rpt1"
                     /note="first BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17733"
                     /db_xref="CDD:349365"
     Region          239..318
                     /region_name="BRCT_Ect2_rpt2"
                     /note="second BRCT domain of epithelial cell-transforming
                     sequence 2 protein (ECT2) and similar proteins; cd17732"
                     /db_xref="CDD:349364"
     Site            order(249..252,254,271..272,284..285,287..291)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349364"
     Region          396..580
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(399,403,502,530..531,534..535,537..538,541..542,
                     545..546,549,575,579)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          571..744
                     /region_name="PH_Ect2"
                     /note="Epithelial cell transforming 2 (Ect2) pleckstrin
                     homology (PH) domain; cd01229"
                     /db_xref="CDD:269936"
     CDS             1..853
                     /gene="ECT2"
                     /coded_by="XM_041467808.1:1..2562"
                     /db_xref="GeneID:121353717"
ORIGIN      
        1 madsstlvse tgrslladss vldskiiets kenvfratvl dveeempqie trvvlvqeag
       61 kheellkale eiktpyiktd tieelgdsds pefetifvvs dfqapifsnl cradcrvigp
      121 pvvlhcaqkg eplpfscrpl ycasmlnlvl cftgfrkkde lvklvtlvhh mggiirrdfs
      181 skvthlvans thgdkfriav slgvpivkae wiykawekrn eidfcaaddd frnqfkvppf
      241 qdcmlsflgf sddekanmee mtemqgghyl pvgdercthl vveestvkdl pfeplkklyv
      301 vkqewfwgsi qmdaragesm ylfeksespd fkksvsllsl stpnsnrkrr rlketlaqlt
      361 retdmspfpp etpkscarps knstplplkq sarwqvakel yqtesnyvdi lttiiqlfqv
      421 plekegqlgg pilaqeeikt ifgsipdild vhtkikedle dlminwtesk sigdiilkys
      481 kdllktyppf vnffemsket itrcekqkpr fhaflkinqa kpecgrqsla ellirpvqrl
      541 psvalllndi kkhtaeenpd kitleraies lkevmthine dkrkteaqrq ffdvvyevdg
      601 cpanllsshr slvqrletva lgddlcdrge qvtlflfndc leiarkrhkv igafksphgh
      661 trppaslkhv vlmplsqikk vldiretedc qkafalvvrp ptelnnklls fqmttedpck
      721 edwlkmlcrh vantickada enliyiadpd svevntkdmd stlsrasrai kktskkvtra
      781 fsfsktpkra lrralmshsa tegrspssne sflgsrlsst sslasvpsps lvslpsifer
      841 rshtlsrstt hli
//
LOCUS       XP_041323744             501 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 2, facilitated glucose transporter member 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323744
VERSION     XP_041323744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 2"
                     /calculated_mol_wt=54566
     Region          13..470
                     /region_name="MFS_GLUT_Class1"
                     /note="Class 1 Glucose transporters (GLUTs) of the Major
                     Facilitator Superfamily; cd17431"
                     /db_xref="CDD:340989"
     Site            order(25,29,173,176..177,180,294..295,299..300,303,329,
                     391..392,396,400,423,427)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340989"
     CDS             1..501
                     /gene="SLC2A2"
                     /coded_by="XM_041467810.1:1..1506"
                     /db_xref="GeneID:121353718"
ORIGIN      
        1 mqkekhltgt lvlsvftavl gffqygyslg vinapqkvie ahygrvlgid gtegtlpppt
       61 dtsedlaasp hiltmywsls vsvfaiggmv ssftvgwigd rlgrvkamlv vnvlsiagnl
      121 lmglakfgps hiliisgrav tglycglssg lvpmyvsevs ptalrgalgt lhqlaivtgi
      181 lfsqilgldf llgndemwpl llglsgvaal lqffllllcp esprylyikl gkveeakknl
      241 krlrgncdpm keieemekek qeaasekkvs irqlftssky rqavivalmv qisqqfsgin
      301 aifyystnif eragvdqpvy atigvgvvnt vftvisvflv ekagrrslfl aglmgmlvsa
      361 vamtvglvll sqfawmsyvs mvaiflfvif fevgpgpipw fivaelfsqg prpaaiavag
      421 fcnwacnfiv gmcfqyiadl cgpyvfaifa glllifflfa hfkvpetkgk sfeeiaavfr
      481 rkklsakamt elqdlrrgee a
//
LOCUS       XP_041323745             217 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 4 L6 family member 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323745
VERSION     XP_041323745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="transmembrane 4 L6 family member 4 isoform X1"
                     /calculated_mol_wt=22683
     Region          1..185
                     /region_name="L6_membrane"
                     /note="L6 membrane protein; pfam05805"
                     /db_xref="CDD:461745"
     CDS             1..217
                     /gene="TM4SF4"
                     /coded_by="XM_041467811.1:53..706"
                     /db_xref="GeneID:121353719"
ORIGIN      
        1 mctggcakcl ggtlvplavl ctlanillff pggkvaeyst hitdevwyfg gilgsgvlmi
       61 fpalvflglq nndccgccgn rscgkrfamf ssiifaaigv lgagycfivs avalnkgpkc
      121 qsggdwtypf qagdyladht lwerctspdn ivpwhltlfs lllvmsgiqa vlcgiqvvng
      181 lfgticgdck ccgccgvsnc clsfvmlctd glhttss
//
LOCUS       XP_041323746             201 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 4 L6 family member 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323746
VERSION     XP_041323746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="transmembrane 4 L6 family member 4 isoform X2"
                     /calculated_mol_wt=20912
     Region          1..185
                     /region_name="L6_membrane"
                     /note="L6 membrane protein; pfam05805"
                     /db_xref="CDD:461745"
     CDS             1..201
                     /gene="TM4SF4"
                     /coded_by="XM_041467812.1:53..658"
                     /db_xref="GeneID:121353719"
ORIGIN      
        1 mctggcakcl ggtlvplavl ctlanillff pggkvaeyst hitdevwyfg gilgsgvlmi
       61 fpalvflglq nndccgccgn rscgkrfamf ssiifaaigv lgagycfivs avalnkgpkc
      121 qsggdwtypf qagdyladht lwerctspdn ivpwhltlfs lllvmsgiqa vlcgiqvvng
      181 lfgticgdck ccgccggdgt v
//
LOCUS       XP_041323747             363 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323747
VERSION     XP_041323747.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467813.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="P2Y purinoceptor 1"
                     /calculated_mol_wt=41196
     Region          42..325
                     /region_name="7tmA_P2Y1"
                     /note="P2Y purinoceptor 1, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15377"
                     /db_xref="CDD:341350"
     Region          42..69
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341350"
     Site            order(52,56,92..93,95..96,109,116..117)
                     /site_type="other"
                     /note="allosteric modulator binding site [chemical
                     binding]"
                     /db_xref="CDD:341350"
     Region          76..101
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341350"
     Site            order(97,100..101,114..119,121..122,125,170,172..176,191,
                     193..195,204,207..209,211..213,215..216,263,266..267,
                     269..270,273,292..293,295..297,300,303..304)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:341350"
     Region          114..144
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341350"
     Region          156..178
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341350"
     Region          204..233
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341350"
     Region          243..273
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341350"
     Region          293..318
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341350"
     CDS             1..363
                     /gene="P2RY1"
                     /coded_by="XM_041467813.1:239..1330"
                     /db_xref="GeneID:121353720"
ORIGIN      
        1 mtevllsaal ngtepnllss sgwsagnvtt kcsltktgfq fyylptvyil vfitgflgns
       61 vaiwmfvfhm rpwsgisvym fnlaladfly vltlpalify yfnktdwifg dimcklqrfi
      121 fhvnlygsil fltcisvhry tgvvhplksl grlkkknavy isslvwvlvv aaispilfys
      181 gtgirknktt tcydttaddy lrsyfiysmc ttvlmfcipf ivilgcygli vkaliykdld
      241 nsplrrksiy lviivltvfa vsylpfhvmk tlnlrarvdf qtpdmcafnd kvyatyqvtr
      301 glaslnscvd pilyflagdt frrklsratr kssrrsehnv qsksedmtln ilseykqngd
      361 tsl
//
LOCUS       XP_041323748             489 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2J2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323748
VERSION     XP_041323748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="cytochrome P450 2J2-like"
                     /calculated_mol_wt=55969
     Region          62..484
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(121,125,132,179,293..294,297..298,301..302,305,356,
                     366,368,391,427..429,433..437,440..441)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410760"
     Site            order(205..206,293,296..297,301,364..367)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410760"
     CDS             1..489
                     /gene="LOC121353721"
                     /coded_by="XM_041467814.1:1..1470"
                     /db_xref="GeneID:121353721"
ORIGIN      
        1 mlgiteifia lvacllilqf lrlqwirtql ppgpaplpii gnlwlldfkl rretlskltn
       61 lygniytlwm gqtplvvlng ykavkdgivt hseevsgrpl tpfyrdmmge kgifltnght
      121 wkqqrrfgmt iirtlslgkn nlehqiqrea chlvdiftnt kgkpfdphts ivraianiic
      181 avvfghcfss edesfsklik aiysviyfqg tiwgrlydaf pwlmhhlpgp hqevfayndf
      241 mhrlvmeevq aherqntgdp qdlidfylaq itktkddpts tfnkenmvqt vvdlllggte
      301 ttsttllwal lymvqypeiq ekvqreieav lepshvisye drkklpytna vihealrysn
      361 vtsvgvprqc lrsttllgfh ikkgtlvlpn lhsvvydteh watpwkfnpd hfldldgnfv
      421 nkeaflpfsa ghrvclgerm arvelfifft nllraftfql pegvkeisle yilgailqph
      481 pyklcavph
//
LOCUS       XP_041323749             243 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 12 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323749
VERSION     XP_041323749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..243
                     /product="fibroblast growth factor 12 isoform X1"
                     /calculated_mol_wt=27324
     Region          68..206
                     /region_name="beta-trefoil_FGF12"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 12 (FGF12) and similar proteins; cd23328"
                     /db_xref="CDD:467014"
     Site            order(69,71,73,110,113,149,151,153..154,200)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467014"
     CDS             1..243
                     /gene="FGF12"
                     /coded_by="XM_041467815.1:32..763"
                     /db_xref="GeneID:121353722"
ORIGIN      
        1 maaaiassli rqkrqaresn sdrvsaskrr sspskdgrsl cerhvlgvfs kvrfcsgrkr
       61 pvrrrpepql kgivtrlfsq qeyflqmhpd gtidgtkden sdytlfnlip vglrvvaiqg
      121 vkaglyvamn aegylyssdv ftpeckfkes vfenyyviys stlyrqqesg rawflglnke
      181 gqimkgnrvk ktkpsshfvp kpievcmyre pslheigekq grsrkssgtp tmnggkvvnq
      241 dst
//
LOCUS       XP_041323750             206 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 12 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323750
VERSION     XP_041323750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="fibroblast growth factor 12 isoform X2"
                     /calculated_mol_wt=23149
     Region          31..169
                     /region_name="beta-trefoil_FGF12"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 12 (FGF12) and similar proteins; cd23328"
                     /db_xref="CDD:467014"
     Site            order(32,34,36,73,76,112,114,116..117,163)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467014"
     CDS             1..206
                     /gene="FGF12"
                     /coded_by="XM_041467816.1:1..621"
                     /db_xref="GeneID:121353722"
ORIGIN      
        1 mrilglllek gshmlqclcg rrlrsshspe pqlkgivtrl fsqqeyflqm hpdgtidgtk
       61 densdytlfn lipvglrvva iqgvkaglyv amnaegylys sdvftpeckf kesvfenyyv
      121 iysstlyrqq esgrawflgl nkegqimkgn rvkktkpssh fvpkpievcm yrepslheig
      181 ekqgrsrkss gtptmnggkv vnqdst
//
LOCUS       XP_041323751            1247 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase MECOM isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323751
VERSION     XP_041323751.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467817.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1247
                     /product="histone-lysine N-methyltransferase MECOM isoform
                     X1"
                     /calculated_mol_wt=140000
     Region          51..208
                     /region_name="PR-SET_PRDM3"
                     /note="PR-SET domain found in MDS1 and EVI1 complex locus
                     protein and similar proteins; cd19214"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,113,140,153..157,159,168..169,193)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,153..157,159,193)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380991"
     Region          215..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          281..305
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          295..317
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          325..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(330,333,335,337..338,341..342,345,360,362,366..367,
                     370..371,374,388,390,392,394..395,398..399,402)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          355..375
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..403
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          383..403
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          412..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          928..950
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          930..950
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(935,937,939,941..942,945..946,949,963,965,969..970,
                     973..974,978,992,994,996,998..999,1002..1003,1006)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          942..966
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          956..979
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          958..979
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          985..1007
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          987..1007
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1247
                     /gene="MECOM"
                     /coded_by="XM_041467817.1:278..4021"
                     /db_xref="GeneID:121353723"
ORIGIN      
        1 mrskgrarkl aasdeclyes fpelplgemp eadgeaanvq cptsisiqep sspatsseaf
       61 tpkesspyka piyipddipi psefelresn ipgaglgiwt krkieagekf gpfvgeqrph
      121 lkdpsygwei ldefcnvkfc idasqpdvgn wlkyikfagc ynqhnlvacq isdqifyrvv
      181 adiepgeell lfmksedysh etmapdihee rqyrcedcdq lfeskaelvd hqkfpcstph
      241 safsmveedf qkklenendl qdvheiqeck ecdqvfpdlq slekhmlshs eereykcdqc
      301 pkafnwksnl irhqmshdsg khyecencak qvftdpsnlq rhirsqhvga rahacpecgk
      361 tfatssglkq hkhihssvkp ficevchksy tqfsnlcrhk rmhadcrtqi kckdcgqmfs
      421 ttsslnkhrr fcegknhfaa ggffgqgisl pgtpamdkts mvnmnhanpg ladyfganrh
      481 pagltfptap gfsfsfpglf psglyhrppl lptsspvkgl psadqtnksq splmtnpqil
      541 patqdilkal nkqpsvgenk pvelqpegss eerpheklsd qsessdldld dvstpsgsdl
      601 ettsgsdles diesekekfk engkmfkdkv sslqslasin nkkdhsnhsi fspsleeqta
      661 vsgavndsik aiasiaekyf gstglvglqd kkvgalpyps mfplpffpaf sqsmypfpdr
      721 dlrplplkve pqspseikki pkgssespfd ltikrkeekp ltpipskpaa psassqdqpl
      781 dlsmgsrsra sstrqaeprk nhvfgekkgg dleqrkases slqharptpf fmdpiyrvek
      841 rkltdpleal kekylrpspg flfhpqfqlp dqriwvsaie nmaeklesfs alkpeaseli
      901 qsvpsmfnfr appsalpetl lrkgkerytc rycgkifprs anltrhlrth tgeqpyrcky
      961 cdrsfsissn lqrhvrnihn kekpfkchlc drcfgqqtnl drhlkkheng nmsgtatssp
     1021 hselestgai lddkedsyft eirnfignsn hnnqsprnse ermngshfkd ekamvasqns
     1081 dllddeeaed evmmdeedee semagkavke patsdmhegt peedyeetsa ldmnckaspg
     1141 rykeeeynkt glsaldhirh ftdslkmrkm eenqyseael aafnasqlpe dlkqplyrks
     1201 ksqayammls lsdkdslhsa shsspnmwhs maraaaessa iqsishv
//
LOCUS       XP_041323752            1246 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase MECOM isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323752
VERSION     XP_041323752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467818.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1246
                     /product="histone-lysine N-methyltransferase MECOM isoform
                     X2"
                     /calculated_mol_wt=139872
     Region          51..208
                     /region_name="PR-SET_PRDM3"
                     /note="PR-SET domain found in MDS1 and EVI1 complex locus
                     protein and similar proteins; cd19214"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,113,140,153..157,159,168..169,193)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,153..157,159,193)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380991"
     Region          215..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          281..305
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <306..399
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          323..344
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          325..346
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(330,332,334,336..337,340..341,344,359,361,365..366,
                     369..370,373,387,389,391,393..394,397..398,401)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          380..402
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          411..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          927..949
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          929..949
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(934,936,938,940..941,944..945,948,962,964,968..969,
                     972..973,977,991,993,995,997..998,1001..1002,1005)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          941..965
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          955..978
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          957..978
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          984..1006
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          986..1006
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1246
                     /gene="MECOM"
                     /coded_by="XM_041467818.1:277..4017"
                     /db_xref="GeneID:121353723"
ORIGIN      
        1 mrskgrarkl aasdeclyes fpelplgemp eadgeaanvq cptsisiqep sspatsseaf
       61 tpkesspyka piyipddipi psefelresn ipgaglgiwt krkieagekf gpfvgeqrph
      121 lkdpsygwei ldefcnvkfc idasqpdvgn wlkyikfagc ynqhnlvacq isdqifyrvv
      181 adiepgeell lfmksedysh etmapdihee rqyrcedcdq lfeskaelvd hqkfpcstph
      241 safsmveedf qkklenendl qdvheiqeck ecdqvfpdlq slekhmlshs eereykcdqc
      301 pkafnwksnl irhqmshdsg khyecencak vftdpsnlqr hirsqhvgar ahacpecgkt
      361 fatssglkqh khihssvkpf icevchksyt qfsnlcrhkr mhadcrtqik ckdcgqmfst
      421 tsslnkhrrf cegknhfaag gffgqgislp gtpamdktsm vnmnhanpgl adyfganrhp
      481 agltfptapg fsfsfpglfp sglyhrppll ptsspvkglp sadqtnksqs plmtnpqilp
      541 atqdilkaln kqpsvgenkp velqpegsse erpheklsdq sessdldldd vstpsgsdle
      601 ttsgsdlesd iesekekfke ngkmfkdkvs slqslasinn kkdhsnhsif spsleeqtav
      661 sgavndsika iasiaekyfg stglvglqdk kvgalpypsm fplpffpafs qsmypfpdrd
      721 lrplplkvep qspseikkip kgssespfdl tikrkeekpl tpipskpaap sassqdqpld
      781 lsmgsrsras strqaeprkn hvfgekkggd leqrkasess lqharptpff mdpiyrvekr
      841 kltdplealk ekylrpspgf lfhpqfqlpd qriwvsaien maeklesfsa lkpeaseliq
      901 svpsmfnfra ppsalpetll rkgkerytcr ycgkifprsa nltrhlrtht geqpyrckyc
      961 drsfsissnl qrhvrnihnk ekpfkchlcd rcfgqqtnld rhlkkhengn msgtatssph
     1021 selestgail ddkedsyfte irnfignsnh nnqsprnsee rmngshfkde kamvasqnsd
     1081 llddeeaede vmmdeedees emagkavkep atsdmhegtp eedyeetsal dmnckaspgr
     1141 ykeeeynktg lsaldhirhf tdslkmrkme enqyseaela afnasqlped lkqplyrksk
     1201 sqayammlsl sdkdslhsas hsspnmwhsm araaaessai qsishv
//
LOCUS       XP_041323753            1238 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase MECOM isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323753
VERSION     XP_041323753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1238
                     /product="histone-lysine N-methyltransferase MECOM isoform
                     X3"
                     /calculated_mol_wt=138816
     Region          51..208
                     /region_name="PR-SET_PRDM3"
                     /note="PR-SET domain found in MDS1 and EVI1 complex locus
                     protein and similar proteins; cd19214"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,113,140,153..157,159,168..169,193)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,153..157,159,193)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380991"
     Region          215..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          281..305
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          295..317
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          325..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(330,333,335,337..338,341..342,345,360,362,366..367,
                     370..371,374,388,390,392,394..395,398..399,402)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          355..375
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          381..403
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          383..403
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          412..430
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          852..971
                     /region_name="PHA00733"
                     /note="hypothetical protein"
                     /db_xref="CDD:177301"
     Region          919..941
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          921..941
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(926,928,930,932..933,936..937,940,954,956,960..961,
                     964..965,969,983,985,987,989..990,993..994,997)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          933..957
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          949..970
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          976..998
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          978..998
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1238
                     /gene="MECOM"
                     /coded_by="XM_041467819.1:277..3993"
                     /db_xref="GeneID:121353723"
ORIGIN      
        1 mrskgrarkl aasdeclyes fpelplgemp eadgeaanvq cptsisiqep sspatsseaf
       61 tpkesspyka piyipddipi psefelresn ipgaglgiwt krkieagekf gpfvgeqrph
      121 lkdpsygwei ldefcnvkfc idasqpdvgn wlkyikfagc ynqhnlvacq isdqifyrvv
      181 adiepgeell lfmksedysh etmapdihee rqyrcedcdq lfeskaelvd hqkfpcstph
      241 safsmveedf qkklenendl qdvheiqeck ecdqvfpdlq slekhmlshs eereykcdqc
      301 pkafnwksnl irhqmshdsg khyecencak qvftdpsnlq rhirsqhvga rahacpecgk
      361 tfatssglkq hkhihssvkp ficevchksy tqfsnlcrhk rmhadcrtqi kckdcgqmfs
      421 ttsslnkhrr fcegknhfaa ggffgqgisl pgtpamdkts mvnmnhanpg ladyfganrh
      481 pagltfptap gfsfsfpglf psglyhrppl lptsspvkgl psadqtnksq splmtnpqil
      541 patqdilkal nkqpsvgenk pvelqpegss eerpheklsd qsessdldld dvstpsgsdl
      601 ettsgsdles diesekekfk engkmfkdkv sslqslasin nkkdhsnhsi fspsleeqta
      661 vsgavndsik aiasiaekyf gstglvglqd kkvgalpyps mfplpffpaf sqsmypfpdr
      721 dlrplplkve pqspseikki pkgssespfd ltikrkeekp ltpipskpaa psassqdqpl
      781 dlsmgsrsra sstrqaeprk nhvfgekkgg dleqrkases slqharptpf fmdpiyrvek
      841 rkltdpleal kekylrpspg flfhpqvsai enmaeklesf salkpeasel iqsvpsmfnf
      901 rappsalpet llrkgkeryt crycgkifpr sanltrhlrt htgeqpyrck ycdrsfsiss
      961 nlqrhvrnih nkekpfkchl cdrcfgqqtn ldrhlkkhen gnmsgtatss phselestga
     1021 ilddkedsyf teirnfigns nhnnqsprns eermngshfk dekamvasqn sdllddeeae
     1081 devmmdeede esemagkavk epatsdmheg tpeedyeets aldmnckasp grykeeeynk
     1141 tglsaldhir hftdslkmrk meenqyseae laafnasqlp edlkqplyrk sksqayamml
     1201 slsdkdslhs ashsspnmwh smaraaaess aiqsishv
//
LOCUS       XP_041323754            1237 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase MECOM isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323754
VERSION     XP_041323754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467820.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1237
                     /product="histone-lysine N-methyltransferase MECOM isoform
                     X4"
                     /calculated_mol_wt=138688
     Region          51..208
                     /region_name="PR-SET_PRDM3"
                     /note="PR-SET domain found in MDS1 and EVI1 complex locus
                     protein and similar proteins; cd19214"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,113,140,153..157,159,168..169,193)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,153..157,159,193)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380991"
     Region          215..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          281..305
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          295..317
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          323..344
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          325..346
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          328..>370
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          328..346
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Site            order(330,332,334,336..337,340..341,344,359,361,365..366,
                     369..370,373,387,389,391,393..394,397..398,401)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Site            order(330,336,343,345,353,360)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          380..402
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          382..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          411..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          851..970
                     /region_name="PHA00733"
                     /note="hypothetical protein"
                     /db_xref="CDD:177301"
     Region          918..940
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          920..940
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(925,927,929,931..932,935..936,939,953,955,959..960,
                     963..964,968,982,984,986,988..989,992..993,996)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          932..956
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          948..969
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          975..997
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          977..997
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1237
                     /gene="MECOM"
                     /coded_by="XM_041467820.1:276..3989"
                     /db_xref="GeneID:121353723"
ORIGIN      
        1 mrskgrarkl aasdeclyes fpelplgemp eadgeaanvq cptsisiqep sspatsseaf
       61 tpkesspyka piyipddipi psefelresn ipgaglgiwt krkieagekf gpfvgeqrph
      121 lkdpsygwei ldefcnvkfc idasqpdvgn wlkyikfagc ynqhnlvacq isdqifyrvv
      181 adiepgeell lfmksedysh etmapdihee rqyrcedcdq lfeskaelvd hqkfpcstph
      241 safsmveedf qkklenendl qdvheiqeck ecdqvfpdlq slekhmlshs eereykcdqc
      301 pkafnwksnl irhqmshdsg khyecencak vftdpsnlqr hirsqhvgar ahacpecgkt
      361 fatssglkqh khihssvkpf icevchksyt qfsnlcrhkr mhadcrtqik ckdcgqmfst
      421 tsslnkhrrf cegknhfaag gffgqgislp gtpamdktsm vnmnhanpgl adyfganrhp
      481 agltfptapg fsfsfpglfp sglyhrppll ptsspvkglp sadqtnksqs plmtnpqilp
      541 atqdilkaln kqpsvgenkp velqpegsse erpheklsdq sessdldldd vstpsgsdle
      601 ttsgsdlesd iesekekfke ngkmfkdkvs slqslasinn kkdhsnhsif spsleeqtav
      661 sgavndsika iasiaekyfg stglvglqdk kvgalpypsm fplpffpafs qsmypfpdrd
      721 lrplplkvep qspseikkip kgssespfdl tikrkeekpl tpipskpaap sassqdqpld
      781 lsmgsrsras strqaeprkn hvfgekkggd leqrkasess lqharptpff mdpiyrvekr
      841 kltdplealk ekylrpspgf lfhpqvsaie nmaeklesfs alkpeaseli qsvpsmfnfr
      901 appsalpetl lrkgkerytc rycgkifprs anltrhlrth tgeqpyrcky cdrsfsissn
      961 lqrhvrnihn kekpfkchlc drcfgqqtnl drhlkkheng nmsgtatssp hselestgai
     1021 lddkedsyft eirnfignsn hnnqsprnse ermngshfkd ekamvasqns dllddeeaed
     1081 evmmdeedee semagkavke patsdmhegt peedyeetsa ldmnckaspg rykeeeynkt
     1141 glsaldhirh ftdslkmrkm eenqyseael aafnasqlpe dlkqplyrks ksqayammls
     1201 lsdkdslhsa shsspnmwhs maraaaessa iqsishv
//
LOCUS       XP_041323755            1219 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase MECOM isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323755
VERSION     XP_041323755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1219
                     /product="histone-lysine N-methyltransferase MECOM isoform
                     X5"
                     /calculated_mol_wt=136864
     Region          23..180
                     /region_name="PR-SET_PRDM3"
                     /note="PR-SET domain found in MDS1 and EVI1 complex locus
                     protein and similar proteins; cd19214"
                     /db_xref="CDD:380991"
     Site            order(63,66..68,85,112,125..129,131,140..141,165)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380991"
     Site            order(63,66..68,125..129,131,165)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380991"
     Region          187..212
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          241..261
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          253..277
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          267..289
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          297..319
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,305,307,309..310,313..314,317,332,334,338..339,
                     342..343,346,360,362,364,366..367,370..371,374)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          327..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          353..375
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          355..375
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          384..402
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          900..922
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          902..922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(907,909,911,913..914,917..918,921,935,937,941..942,
                     945..946,950,964,966,968,970..971,974..975,978)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          914..938
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          930..>964
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          930..956
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          930..951
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(935,941,953,955,958)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          957..979
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          959..979
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1219
                     /gene="MECOM"
                     /coded_by="XM_041467821.1:366..4025"
                     /db_xref="GeneID:121353723"
ORIGIN      
        1 mpeadgeaan vqcptsisiq epsspatsse aftpkesspy kapiyipddi pipsefelre
       61 snipgaglgi wtkrkieage kfgpfvgeqr phlkdpsygw eildefcnvk fcidasqpdv
      121 gnwlkyikfa gcynqhnlva cqisdqifyr vvadiepgee lllfmksedy shetmapdih
      181 eerqyrcedc dqlfeskael vdhqkfpcst phsafsmvee dfqkklenen dlqdvheiqe
      241 ckecdqvfpd lqslekhmls hseereykcd qcpkafnwks nlirhqmshd sgkhyecenc
      301 akqvftdpsn lqrhirsqhv garahacpec gktfatssgl kqhkhihssv kpficevchk
      361 sytqfsnlcr hkrmhadcrt qikckdcgqm fsttsslnkh rrfcegknhf aaggffgqgi
      421 slpgtpamdk tsmvnmnhan pgladyfgan rhpagltfpt apgfsfsfpg lfpsglyhrp
      481 pllptsspvk glpsadqtnk sqsplmtnpq ilpatqdilk alnkqpsvge nkpvelqpeg
      541 sseerphekl sdqsessdld lddvstpsgs dlettsgsdl esdiesekek fkengkmfkd
      601 kvsslqslas innkkdhsnh sifspsleeq tavsgavnds ikaiasiaek yfgstglvgl
      661 qdkkvgalpy psmfplpffp afsqsmypfp drdlrplplk vepqspseik kipkgssesp
      721 fdltikrkee kpltpipskp aapsassqdq pldlsmgsrs rasstrqaep rknhvfgekk
      781 ggdleqrkas esslqharpt pffmdpiyrv ekrkltdple alkekylrps pgflfhpqfq
      841 lpdqriwvsa ienmaekles fsalkpease liqsvpsmfn frappsalpe tllrkgkery
      901 tcrycgkifp rsanltrhlr thtgeqpyrc kycdrsfsis snlqrhvrni hnkekpfkch
      961 lcdrcfgqqt nldrhlkkhe ngnmsgtats sphselestg ailddkedsy fteirnfign
     1021 snhnnqsprn seermngshf kdekamvasq nsdllddeea edevmmdeed eesemagkav
     1081 kepatsdmhe gtpeedyeet saldmnckas pgrykeeeyn ktglsaldhi rhftdslkmr
     1141 kmeenqysea elaafnasql pedlkqplyr ksksqayamm lslsdkdslh sashsspnmw
     1201 hsmaraaaes saiqsishv
//
LOCUS       XP_041323756            1055 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase MECOM isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323756
VERSION     XP_041323756.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467822.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1055
                     /product="histone-lysine N-methyltransferase MECOM isoform
                     X6"
                     /calculated_mol_wt=118638
     Region          <1..16
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Region          23..48
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          77..97
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          89..113
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          105..125
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          133..155
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(138,141,143,145..146,149..150,153,168,170,174..175,
                     178..179,182,196,198,200,202..203,206..207,210)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          163..183
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          189..211
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          220..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          736..758
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          738..758
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(743,745,747,749..750,753..754,757,771,773,777..778,
                     781..782,786,800,802,804,806..807,810..811,814)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          750..774
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          766..>800
                     /region_name="SUF4-like"
                     /note="N-terminal domain of Oryza sativa transcription
                     factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana
                     SUF4 (AtSUF4), and similar proteins; cd20908"
                     /db_xref="CDD:411020"
     Region          766..792
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:411020"
     Region          766..787
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(771,777,789,791,794)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411020"
     Region          793..815
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          795..815
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..1055
                     /gene="MECOM"
                     /coded_by="XM_041467822.1:386..3553"
                     /db_xref="GeneID:121353723"
ORIGIN      
        1 mksedyshet mapdiheerq yrcedcdqlf eskaelvdhq kfpcstphsa fsmveedfqk
       61 klenendlqd vheiqeckec dqvfpdlqsl ekhmlshsee reykcdqcpk afnwksnlir
      121 hqmshdsgkh yecencakqv ftdpsnlqrh irsqhvgara hacpecgktf atssglkqhk
      181 hihssvkpfi cevchksytq fsnlcrhkrm hadcrtqikc kdcgqmfstt sslnkhrrfc
      241 egknhfaagg ffgqgislpg tpamdktsmv nmnhanpgla dyfganrhpa gltfptapgf
      301 sfsfpglfps glyhrppllp tsspvkglps adqtnksqsp lmtnpqilpa tqdilkalnk
      361 qpsvgenkpv elqpegssee rpheklsdqs essdldlddv stpsgsdlet tsgsdlesdi
      421 esekekfken gkmfkdkvss lqslasinnk kdhsnhsifs psleeqtavs gavndsikai
      481 asiaekyfgs tglvglqdkk vgalpypsmf plpffpafsq smypfpdrdl rplplkvepq
      541 spseikkipk gssespfdlt ikrkeekplt pipskpaaps assqdqpldl smgsrsrass
      601 trqaeprknh vfgekkggdl eqrkasessl qharptpffm dpiyrvekrk ltdplealke
      661 kylrpspgfl fhpqfqlpdq riwvsaienm aeklesfsal kpeaseliqs vpsmfnfrap
      721 psalpetllr kgkerytcry cgkifprsan ltrhlrthtg eqpyrckycd rsfsissnlq
      781 rhvrnihnke kpfkchlcdr cfgqqtnldr hlkkhengnm sgtatssphs elestgaild
      841 dkedsyftei rnfignsnhn nqsprnseer mngshfkdek amvasqnsdl lddeeaedev
      901 mmdeedeese magkavkepa tsdmhegtpe edyeetsald mnckaspgry keeeynktgl
      961 saldhirhft dslkmrkmee nqyseaelaa fnasqlpedl kqplyrksks qayammlsls
     1021 dkdslhsash sspnmwhsma raaaessaiq sishv
//
LOCUS       XP_041323757             911 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase MECOM isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323757
VERSION     XP_041323757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..911
                     /product="histone-lysine N-methyltransferase MECOM isoform
                     X7"
                     /calculated_mol_wt=103347
     Region          51..208
                     /region_name="PR-SET_PRDM3"
                     /note="PR-SET domain found in MDS1 and EVI1 complex locus
                     protein and similar proteins; cd19214"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,113,140,153..157,159,168..169,193)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:380991"
     Site            order(91,94..96,153..157,159,193)
                     /site_type="other"
                     /note="putative SAM binding site"
                     /db_xref="CDD:380991"
     Region          215..240
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          269..289
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          293..>635
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          297..317
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(302,304,306,308..309,312..313,316,330,332,336..337,
                     340..341,344,359,361,363,365..366,369..370,373)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          325..346
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          354..374
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          594..614
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(599,601,603,605..606,609..610,613,627,629,633..634,
                     637..638,642,656,658,660,662..663,666..667,670)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          606..630
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          622..643
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          649..671
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          651..671
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..911
                     /gene="MECOM"
                     /coded_by="XM_041467823.1:274..3009"
                     /db_xref="GeneID:121353723"
ORIGIN      
        1 mrskgrarkl aasdeclyes fpelplgemp eadgeaanvq cptsisiqep sspatsseaf
       61 tpkesspyka piyipddipi psefelresn ipgaglgiwt krkieagekf gpfvgeqrph
      121 lkdpsygwei ldefcnvkfc idasqpdvgn wlkyikfagc ynqhnlvacq isdqifyrvv
      181 adiepgeell lfmksedysh etmapdihee rqyrcedcdq lfeskaelvd hqkfpcstph
      241 safsmveedf qkklenendl qdvheiqeck ecdqvfpdlq slekhmlshs eereykcdqc
      301 pkafnwksnl irhqmshdsg khyecencak vftdpsnlqr hirsqhvgar ahacpecgkt
      361 fatssglkqh khihssvkpf isfsqsmypf pdrdlrplpl kvepqspsei kkipkgsses
      421 pfdltikrke ekpltpipsk paapsassqd qpldlsmgsr srasstrqae prknhvfgek
      481 kggdleqrka sesslqharp tpffmdpiyr vekrkltdpl ealkekylrp spgflfhpqv
      541 saienmaekl esfsalkpea seliqsvpsm fnfrappsal petllrkgke rytcrycgki
      601 fprsanltrh lrthtgeqpy rckycdrsfs issnlqrhvr nihnkekpfk chlcdrcfgq
      661 qtnldrhlkk hengnmsgta tssphseles tgailddked syfteirnfi gnsnhnnqsp
      721 rnseermngs hfkdekamva sqnsdlldde eaedevmmde edeesemagk avkepatsdm
      781 hegtpeedye etsaldmnck aspgrykeee ynktglsald hirhftdslk mrkmeenqys
      841 eaelaafnas qlpedlkqpl yrksksqaya mmlslsdkds lhsashsspn mwhsmaraaa
      901 essaiqsish v
//
LOCUS       XP_041323758             691 aa            linear   VRT 06-MAY-2021
DEFINITION  ski-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041323758
VERSION     XP_041323758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..691
                     /product="ski-like protein"
                     /calculated_mol_wt=78191
     Region          140..239
                     /region_name="DHD_Sno"
                     /note="Dachshund-homology domain found in Ski-like protein
                     (Sno) and similar proteins; cd21084"
                     /db_xref="CDD:410787"
     Region          264..359
                     /region_name="c-SKI_SMAD_bind"
                     /note="c-SKI Smad4 binding domain; smart01046"
                     /db_xref="CDD:198114"
     Region          <548..>681
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     CDS             1..691
                     /gene="SKIL"
                     /coded_by="XM_041467824.1:1527..3602"
                     /db_xref="GeneID:121353725"
ORIGIN      
        1 mespqinfpl glvsdqkrsr iqedgspplk kamtemhvnn kvqvvinklp tikkenlddy
       61 detpveadge ttkpnsasls eplslnpglk htlaqfhlss qsslggpaaf sarysqesms
      121 ptvflplpsp qilsgpllip pdssteltqt llegesiscf kvggekrlcl pqvlnsvlrd
      181 fslqqintvc delyiycsrc tsdqlhilkv lgilpfnaps cglitltdaq rlcnallrpr
      241 tfpqsgsflp gkntlaqlke tgsafevehe clgkcqglfa pqfylapddp ciqclecygm
      301 fspqtfvmhs hrspdkrtch wgfesakwhc ylhinqkylg tseerelkhl leemkekfse
      361 knqkrtrska epqqnlelpq wypvikqeae tdpqppsffh psyylymcdk vvapnvslas
      421 qykdvaktsv kasevnkssp gqsekklssg khkkpasype vsleeqekid lktgveqpnk
      481 rldppvstrs argakpervs skitrdsgra eggadartls ptlmkdisce ddkgrimeev
      541 mktyikqqek lntilrrkqq lqmevemlsn skamkeltee qqnlqkelec lqaehaqrme
      601 efyfeqrdle kkldqvmkqk cscdsnlekd keaeyaaqla elrqrldhae adrqelqdel
      661 rqerearekl emmikelklq ilksskngkg k
//
LOCUS       XP_041323759             207 aa            linear   VRT 06-MAY-2021
DEFINITION  claudin-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041323759
VERSION     XP_041323759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="claudin-11"
                     /calculated_mol_wt=21944
     Region          8..172
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..207
                     /gene="CLDN11"
                     /coded_by="XM_041467825.1:153..776"
                     /db_xref="GeneID:121353726"
ORIGIN      
        1 mvatclhlag fvcsfvgwig vvvatatndw vvtcgytitt crkmdelgsk glwadcvmat
       61 glyhckplvd ililpgyvqa cralmiaasv lglpaiflli tvlpcirmgh epgaakyrrs
      121 qlggiliill amcgvvatiw fpvcahrett imsfgyslyt gwigsalclf ggcvivccsg
      181 daqtfgenrf yygsgssspt haksahv
//
LOCUS       XP_041323760             490 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2J4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323760
VERSION     XP_041323760.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467826.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="cytochrome P450 2J4-like"
                     /calculated_mol_wt=55800
     Region          62..485
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(121,125,132,179,294..295,298..299,302..303,306,357,
                     367,369,392,428..430,434..438,441..442)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410760"
     Site            order(205..206,294,297..298,302,365..368)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410760"
     CDS             1..490
                     /gene="LOC121353728"
                     /coded_by="XM_041467826.1:1..1473"
                     /db_xref="GeneID:121353728"
ORIGIN      
        1 mltitqgfvv liifllivef frlqkackqf ppgptplpll gnlvhlnfqf hrdllmelak
       61 thgnmytlwf gwvpvvilng fqavkdgmtt hpedvsgrlv spffralakg kgiilasgrs
      121 wkqqrrfgim tlrnlgmgkk glehrvqeea shlveffvnl kgrpvdpsfp lfhsisnvic
      181 avvfgyhfsd edktfhelih atekifrfag sfvhqmyeil pwllrrlpgs hknvlacydv
      241 lssfarkeir rhvergipae pqdfidfyla eiekskegak pkydeenlvy vindlflggs
      301 etssttlywg llymvvnpdi qakvqkelda vlgpsqlicy edrrklpytn avvheiqrfs
      361 nivfvgvprl cvrnttllgf pvkkgtivip niasvlydpe qwetprqfnp dhfldkegnf
      421 ipreaflpfs aghrvclgeh lartelfiff asllraftfr lpegvttvst epvmggtlqp
      481 hpyrlcaipr
//
LOCUS       XP_041323761             407 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic initiation factor 4A-II [Pyrgilauda ruficollis].
ACCESSION   XP_041323761
VERSION     XP_041323761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..407
                     /product="eukaryotic initiation factor 4A-II"
                     /calculated_mol_wt=46212
     Region          21..407
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(35,53,55,60,79..85)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350804"
     Site            order(36,46,49,54)
                     /site_type="other"
                     /note="eIF4G interface [polypeptide binding]"
                     /db_xref="CDD:350804"
     CDS             1..407
                     /gene="EIF4A2"
                     /coded_by="XM_041467827.1:116..1339"
                     /db_xref="GeneID:121353729"
ORIGIN      
        1 msggsadysr dhggpegmep dgviesnwne ivdnfddmnl kesllrgiya ygfekpsaiq
       61 qraiipcikg ydviaqaqsg tgktatfais ilqqleidlk esqalvlapt relaqqiqkv
      121 ilalgdymga tchaciggtn vrnemqklqa eaphivvgtp grvfdmlnrr ylspkwikmf
      181 vldeademls rgfkdqiyei fqklstniqv vllsatmpmd vlevtkkfmr dpirilvkke
      241 eltlegikqf yinvereewk ldtlcdlyet ltitqavifl ntrrkvdwlt ekmhardftv
      301 salhgdmdqk erdvimrefr sgssrvlitt dllargidvq qvslvinydl ptnrenyihr
      361 igrggrfgrk gvainfvtee dkrilrdiet fynttveemp mnvadli
//
LOCUS       XP_041323762             490 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2J4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323762
VERSION     XP_041323762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="cytochrome P450 2J4-like"
                     /calculated_mol_wt=55695
     Region          62..485
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(121,125,132,179,294..295,298..299,302..303,306,357,
                     367,369,392,428..430,434..438,441..442)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410760"
     Site            order(205..206,294,297..298,302,365..368)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410760"
     CDS             1..490
                     /gene="LOC121353730"
                     /coded_by="XM_041467828.1:1..1473"
                     /db_xref="GeneID:121353730"
ORIGIN      
        1 mlsisealva vavfllitqf lklqrvrkrf ppgpvplpil gtliqlnfqf nrdllmqlak
       61 ihgniftlwf gwapvvilng fqavkdgmtt hpedvsgrlv spfframakg kgimlatght
      121 wkqqrrfalr tlrnlglgkr gleyrvqeea hylvdffasm kgkpvdpsfp lvhsvsnvic
      181 avvfghrfsr edegfhelik atehlfkfgg sfihhlyeif pwlmsrlpgp hkkalacydv
      241 lsnftrreiq mhtergapee lqdfidfyld hiekskdepr stynednmvy sindlflggs
      301 etssttlnwg llymvanpdi qekvqkelda vlgpskvicy edrrelpytn aviheiqrfs
      361 niisvgmprv cvrnttllgf plkkgtivlp niasslydpe qwetprqfnp ghfmdkdgnf
      421 vaqeaflpfs ighrvclgeh lartelfiff asllraftfr lpegvttvst epvmggtlqp
      481 hpyrlcaipr
//
LOCUS       XP_041323764             771 aa            linear   VRT 06-MAY-2021
DEFINITION  probable cationic amino acid transporter [Pyrgilauda ruficollis].
ACCESSION   XP_041323764
VERSION     XP_041323764.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467830.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..771
                     /product="probable cationic amino acid transporter"
                     /calculated_mol_wt=83483
     Region          43..677
                     /region_name="2A0303"
                     /note="cationic amino acid transport permease; TIGR00906"
                     /db_xref="CDD:273330"
     CDS             1..771
                     /gene="SLC7A14"
                     /coded_by="XM_041467830.1:1..2316"
                     /db_xref="GeneID:121353731"
ORIGIN      
        1 msgflsrldp rrvpwgaagh alrarvlrtk pvesmlegsg aaasqgarla kvlttldlis
       61 lgvgscvgtg myvvsglvak emagpgvivs fiiaavasil sgvcyaefgv rvpkttgsay
      121 tysyvtvgef vaffigwnli leyligtaag asalssmfds lanhtisrwm insvgtlngl
      181 gkgeesypdl lalviavivt iivamgvkns vglnnvlnvi nlavwvfimi aglfyiksdn
      241 waegqflpfg wpgvlkgaat cfyafigfdi iattgeeakn pntsipyait aslvtcltay
      301 vsvsmiltlm vpydaidtes plmemfvvhg fyaakfivai gsvagltvsl lgslfpmprv
      361 iyamagdgll frflshvssy tetpvvaciv sgflaallsl lvslrdliem msigtllayt
      421 lvsvcvlllr yqpesdidgf vkflseehtk kkegiladce keacspgseg eefsgpptnt
      481 cgaknlpslg dnemligksd ksaynvnhpn ygtvdmtsgi eadeseniyl iklkkligpr
      541 yytmrihlgl pgkmdrptaa tghtvttcvl llfvlmfifc sfiifgsdyi seqswwavll
      601 vvlmvlliav lvfvilqqpe npkklpymap clpfvpafam lvniylmlkl stvtwirfav
      661 wcfvglliyf gygmwnstle isareealhq styqrydvdv dpfsvddgfs fapegesypa
      721 wgpsedksfs yqqmagtkes hrtsgrsksk grhkppsdal iandeldysp e
//
LOCUS       XP_041323765            1291 aa            linear   VRT 06-MAY-2021
DEFINITION  von Willebrand factor A domain-containing protein 5B2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323765
VERSION     XP_041323765.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467831.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1291
                     /product="von Willebrand factor A domain-containing
                     protein 5B2"
                     /calculated_mol_wt=139360
     Region          2..78
                     /region_name="VIT_2"
                     /note="Vault protein inter-alpha-trypsin domain; cl02699"
                     /db_xref="CDD:470654"
     Region          351..518
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(358,427,456)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     CDS             1..1291
                     /gene="VWA5B2"
                     /coded_by="XM_041467831.1:1..3876"
                     /db_xref="GeneID:121353733"
ORIGIN      
        1 mpglyallsw ealplksstv kacangysls itahltytnp hkepvegifi ypleesevva
       61 gfeaavgsrr vtfqlqnrhr vqdcclqcsp spgrlrrcas ghlvldedve rstfiivtgt
      121 lcpseslavt lstvqelptl pdgalrlllp pvltphvpad pesepaslcd drlalcptsc
      181 fggpgarsqs ptvvpvdsvd vfrgrpynpf pyefafellv kgpcllagle spshalrada
      241 dpwansattt cvtlaephry drdleiilyp cephsphlvi edgtmtypey eahirsrrdy
      301 vriarkdssg erqvafvqkr fhkdifpnpv lmlnfcpave gapgdlqsvt rellflidrs
      361 dsisgpdldk vkeallvalk slpsgtllnl asfgadikpf fpssrlcsne tlrracehlg
      421 glradsggtn llaalgwala qplhhgyprq lflftgaaag nasrilrlvr rqastvrcfs
      481 fgmgpracrr llkamakvsr gcaeflspae rlqpkliksl kkaiepaisd itidwyvpds
      541 meallsptel palypgdrlv sycvlysiar fgdrrplgqd garqssrgsa flsqqevlsp
      601 geshqprqsn pgtgdasldv fsgstevser sidpvsggdi wkriyqpsyi qeqyvlthcs
      661 vstdrsqgll srsstssest gsrdvapegg ssapgadvts qqgqkslslc esstksaplp
      721 sapagtkvtv alsteelewq kkvlaraala grsfstphge ldahrlcqal ekvsqkrnqs
      781 legrldelgp qprqmqpgav esnnllspth ldwdmlveps ylfsaspvpe pgqpslgdas
      841 vplrcqvvih alragkpvsw evtaslesll qpregpgred qprrvakawd kplhrlaars
      901 vvrdnesvaq reakleqgfa rrfrlkavqt skacnvpsly trlvpvdgat qaalpaapev
      961 wgiagsgsrt raaaagnwhh qsssagqgqq qgveeqheap gtaerdgiar spgsissptf
     1021 gwekqnysng ppsspsttsm gsqkstesia gsrfslsrrr gpslvlrpqc lspeserssn
     1081 hashdylplv qlqqargpfq ltesfsevvq ipldrlrras pyashrasls pvspgarsmp
     1141 eagpgaeege epitapqpss ppsrstcsev lsaaawaqad sghgsesdtg phsaapseag
     1201 vscqdtgped lesaswatav alawlehrca gffeewelva akadawlqaq rlpegvdvgc
     1261 lkgaarhlfl llrhwdenit lnmlcynpnn v
//
LOCUS       XP_041323766             352 aa            linear   VRT 06-MAY-2021
DEFINITION  growth hormone secretagogue receptor type 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323766
VERSION     XP_041323766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="growth hormone secretagogue receptor type 1
                     isoform X1"
                     /calculated_mol_wt=39587
     Region          30..320
                     /region_name="7tmA_GHSR"
                     /note="growth hormone secretagogue receptor, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15131"
                     /db_xref="CDD:320259"
     Region          30..57
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320259"
     Region          64..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320259"
     Site            order(89,106,168,183..186,268..269,272..273,287,291)
                     /site_type="other"
                     /note="putative peptide ligand binding site [polypeptide
                     binding]"
                     /db_xref="CDD:320259"
     Region          102..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320259"
     Region          144..166
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320259"
     Region          195..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320259"
     Region          242..272
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320259"
     Region          288..313
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320259"
     CDS             1..352
                     /gene="GHSR"
                     /coded_by="XM_041467832.1:33..1091"
                     /db_xref="GeneID:121353734"
ORIGIN      
        1 mregsaggrg aenrtgaepp lhlfpvpvlt gitvacvllf vigiignlmt mlvvsrfrdm
       61 rtttnfylss mafsdllifl cmpldlfrlw qyrpwnfgnl lcklfqfise sctystilni
      121 talsveryva icfplrakvi itkgkvklvi lflwaisfis agpifilvgv ehengtnpls
      181 tnecrateya irsglltimv wtssiffflp vfcltvlysl igrklwrrkr knigpntair
      241 dknnkqtvkm lvvvvfafil cwlpfhvgry lfsksfeags leiavisqyc nlvsfvlfyl
      301 saainpilyn imsrkyrvaa crlfglralp kqslssskqg ssrgwtepsv lt
//
LOCUS       XP_041323767             336 aa            linear   VRT 06-MAY-2021
DEFINITION  growth hormone secretagogue receptor type 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323767
VERSION     XP_041323767.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467833.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="growth hormone secretagogue receptor type 1
                     isoform X2"
                     /calculated_mol_wt=37716
     Region          30..304
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          32..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          65..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          103..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          148..164
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..336
                     /gene="GHSR"
                     /coded_by="XM_041467833.1:33..1043"
                     /db_xref="GeneID:121353734"
ORIGIN      
        1 mregsaggrg aenrtgaepp lhlfpvpvlt gitvacvllf vigiignlmt mlvvsrfrdm
       61 rtttnfylss mafsdllifl cmpldlfrlw qyrpwnfgnl lcklfqfise sctystilni
      121 talsveryva icfplrakvi itkgkvklvi lflwaisfis agpifilvgv ehengtnpls
      181 tnecrateya irsglltimv wtssiffflp vfcltvlysl igrklwrrkr knigpntair
      241 dknnkqtvkm lgrylfsksf eagsleiavi sqycnlvsfv lfylsaainp ilynimsrky
      301 rvaacrlfgl ralpkqslss skqgssrgwt epsvlt
//
LOCUS       XP_041323768             400 aa            linear   VRT 06-MAY-2021
DEFINITION  translocation protein SEC62 [Pyrgilauda ruficollis].
ACCESSION   XP_041323768
VERSION     XP_041323768.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467834.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..400
                     /product="translocation protein SEC62"
                     /calculated_mol_wt=45803
     Region          <172..287
                     /region_name="Sec62"
                     /note="Translocation protein Sec62; pfam03839"
                     /db_xref="CDD:461073"
     Region          <310..365
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     CDS             1..400
                     /gene="SEC62"
                     /coded_by="XM_041467834.1:44..1246"
                     /db_xref="GeneID:121353735"
ORIGIN      
        1 maerrrhrkr vqevgepfke ekavakylrf ncptkstnmm ghrvdyfias kavdclldsk
       61 wakakkgeea lfttresvvd ycnrllkkqf fhralkvmkm kpdkdtkkek ekgktesgke
      121 eekkskkesg kdektkkeke kekkkdgekd eckkddtpgt pkkketkrkf klephedqvf
      181 ldgnevyvwi ydpvhfktfa mglvlviavi aatlfplwpa emrvgvyyls vgagcfvasi
      241 lllavarcil fliiwlitgg rhhfwflpnl tadvgfidsf rplytheykg pkadlkkeek
      301 aeskkqqkcd seeksdsekk eeedgktegt rnsgtdgsgg erhsdtdsdr reddrsqhss
      361 gngndfemit keeleqqtde gdceeeeeed tesgpshgks
//
LOCUS       XP_041323769             490 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2J6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323769
VERSION     XP_041323769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="cytochrome P450 2J6-like"
                     /calculated_mol_wt=55736
     Region          62..485
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(121,125,132,179,294..295,298..299,302..303,306,357,
                     367,369,392,428..430,434..438,441..442)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410652"
     Site            order(205..206,294,297..298,302,365..368)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410652"
     CDS             1..490
                     /gene="LOC121353736"
                     /coded_by="XM_041467835.1:47..1519"
                     /db_xref="GeneID:121353736"
ORIGIN      
        1 mltvtevlvf lvvslplmqf lklqwmrrqf ppgptpypff gnllqmnfki hhehlkkmak
       61 ihgniftlwl sntpavvlqg fqavkegltt haedvagrpe skifhimtrg ngvlfsnghl
      121 wkqqrrfgma tmrkmgvgkk dqdyllqeea allveylqkt ngkpldptmp vvhtvanvic
      181 silfghrfsr ddenfhrlie sfdtlaafln sisfymyels pwlaghflps vkkvkscvdf
      241 vnallakeie shkgkgklde nrhfidyyld eidktkgdad atydeenliq tvadlfvagt
      301 ettattllwa llymviypdi qekvqkelda vvgcshvfcy edrkklpytn aviheiqrys
      361 nillialprm svkdtellgy hipkntvvla nidsvladpg kwetpdqfnp ghfldkdgnf
      421 vnreaflpfa ighrvcmgel larmelfivf stllqaftft lpegvkevnt kfvfgstmkp
      481 ppyqlcaipr
//
LOCUS       XP_041323770            1120 aa            linear   VRT 06-MAY-2021
DEFINITION  probable guanine nucleotide exchange factor MCF2L2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323770
VERSION     XP_041323770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1120
                     /product="probable guanine nucleotide exchange factor
                     MCF2L2"
                     /calculated_mol_wt=127014
     Region          24..162
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     Region          293..495
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            398..403
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          594..771
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(600,604,701,723..724,727..728,730..731,734..735,
                     738..739,742,767,771)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          778..909
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1019..1073
                     /region_name="SH3_DBS"
                     /note="Src homology 3 domain of DBL's Big Sister (DBS), a
                     guanine nucleotide exchange factor; cd11857"
                     /db_xref="CDD:212791"
     Site            order(1024,1026,1029,1033,1051..1052,1067,1069..1070)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212791"
     CDS             1..1120
                     /gene="MCF2L2"
                     /coded_by="XM_041467836.1:197..3559"
                     /db_xref="GeneID:121353737"
ORIGIN      
        1 mqqeirplva vdiieqlhrq failsggrgk dgapiitfpe fagfseipdd dflnvvtylt
       61 sipsleaasi gfiiiidrrr dkwsavkasl triagafpgn lqlvfvlrps rfiqraiadi
      121 giklyrddfk mkvpiimlns vsdlhgyidk sqltrelggt leyghsqwih hrtaienfam
      181 tvkttaqmlq tfgtdlaete lpndvqctee llsshtehhs klkdelklav kqgatlltci
      241 repvtrsans klspdelenv atverllaql detekafdqf wtkhhlkleq clqlrhfehd
      301 frevkltldn lmetqagftd igdsvtrven llkeqkhlee kgqeplekaq slalhgeqli
      361 qnnhyavdsi rpkcvelrri cddftnetkk kydilgksle lhkqldkasq wceagiylla
      421 sqavdkcqsq egaetalvei ekflvtakeh qlsnpkefyn qfdmiltpei kanaqrivqk
      481 ledvqemfdk rqvslkklaa kqtrpvqpva phpesspkra spkitrpaav atnrrsteis
      541 cppktvseve lskkksikkt kggikievmh easqggssrv lvtsesdenl strrshiine
      601 lietervyve elqsiiegya semdnpnlvh lipsalqnkk eilfgnlpei yyfhnriflk
      661 eiencienpe llarcflkrk edlqiyekyc qnkprsealw rqcgdsiffq ecqrkldhkl
      721 sldayllkpv qritkyqlll kemlkcskns egtaeleeal atvldiiksv ndsmhqiait
      781 gyegdvselg kllmqgsfnv wtdhkkghnk vkdlarfkpm qrhlflytkm llfckkreen
      841 tdghektasy sfknslkmst vgitenvkgd nkkfeiwyng reevyiiqas svelkntwis
      901 eirkvltgql eacreasqlh qritesvyha pmdssnasry srksssiyen ksetsnvdas
      961 nnknrnssps arqkrgwpsr qmpsldtfed feaipssmde lsnssdleee tnpnngsnlf
     1021 rvegsfdscf pdsltledgd lvqfvqegen gqwlvkklvs eksdwvpssi lqpaegdsns
     1081 iikssnadty ndscstasve sdtkesevak sfpaeqrags
//
LOCUS       XP_041323771             378 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323771
VERSION     XP_041323771.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467837.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="lactosylceramide
                     1,3-N-acetyl-beta-D-glucosaminyltransferase"
                     /calculated_mol_wt=44198
     Region          102..298
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..378
                     /gene="B3GNT5"
                     /coded_by="XM_041467837.1:402..1538"
                     /db_xref="GeneID:121353739"
ORIGIN      
        1 mfvsprrvrk chflqicatc filclmifwv pfdnhivshm ksysyrylin syhfvndsls
       61 isrdnlnrvs syqylinhre kcqqqdvlll lfvksspenr hrrdairqtw gnekyvhsql
      121 naniktlfal gqpthhlqkt qqqreleled qkyqdliqqd fldtfhnltl klllqfswvn
      181 aycpharfim sadddifihm pnliaylqsl tqmgaqdlwi grvhrgsppi rdksskyyvp
      241 yemyqwpsyp dytagaayvi sndvaakvye asltlktsly iddvfmglca nkmgivpqyh
      301 vffsgegkap yhpciynkmm tshghvddlr qlwkqatdpk vkkitsgiwg rmycrlvniv
      361 llcklyyvdt ypcsaafs
//
LOCUS       XP_041323772             378 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323772
VERSION     XP_041323772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="lactosylceramide
                     1,3-N-acetyl-beta-D-glucosaminyltransferase"
                     /calculated_mol_wt=44198
     Region          102..298
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..378
                     /gene="B3GNT5"
                     /coded_by="XM_041467838.1:506..1642"
                     /db_xref="GeneID:121353739"
ORIGIN      
        1 mfvsprrvrk chflqicatc filclmifwv pfdnhivshm ksysyrylin syhfvndsls
       61 isrdnlnrvs syqylinhre kcqqqdvlll lfvksspenr hrrdairqtw gnekyvhsql
      121 naniktlfal gqpthhlqkt qqqreleled qkyqdliqqd fldtfhnltl klllqfswvn
      181 aycpharfim sadddifihm pnliaylqsl tqmgaqdlwi grvhrgsppi rdksskyyvp
      241 yemyqwpsyp dytagaayvi sndvaakvye asltlktsly iddvfmglca nkmgivpqyh
      301 vffsgegkap yhpciynkmm tshghvddlr qlwkqatdpk vkkitsgiwg rmycrlvniv
      361 llcklyyvdt ypcsaafs
//
LOCUS       XP_041323773             378 aa            linear   VRT 06-MAY-2021
DEFINITION  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323773
VERSION     XP_041323773.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467839.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="lactosylceramide
                     1,3-N-acetyl-beta-D-glucosaminyltransferase"
                     /calculated_mol_wt=44198
     Region          102..298
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..378
                     /gene="B3GNT5"
                     /coded_by="XM_041467839.1:445..1581"
                     /db_xref="GeneID:121353739"
ORIGIN      
        1 mfvsprrvrk chflqicatc filclmifwv pfdnhivshm ksysyrylin syhfvndsls
       61 isrdnlnrvs syqylinhre kcqqqdvlll lfvksspenr hrrdairqtw gnekyvhsql
      121 naniktlfal gqpthhlqkt qqqreleled qkyqdliqqd fldtfhnltl klllqfswvn
      181 aycpharfim sadddifihm pnliaylqsl tqmgaqdlwi grvhrgsppi rdksskyyvp
      241 yemyqwpsyp dytagaayvi sndvaakvye asltlktsly iddvfmglca nkmgivpqyh
      301 vffsgegkap yhpciynkmm tshghvddlr qlwkqatdpk vkkitsgiwg rmycrlvniv
      361 llcklyyvdt ypcsaafs
//
LOCUS       XP_041323775             709 aa            linear   VRT 06-MAY-2021
DEFINITION  methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323775
VERSION     XP_041323775.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467841.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="methylcrotonoyl-CoA carboxylase subunit alpha,
                     mitochondrial"
                     /calculated_mol_wt=78209
     Region          36..491
                     /region_name="PccA"
                     /note="Acetyl/propionyl-CoA carboxylase, alpha subunit
                     [Lipid transport and metabolism]; COG4770"
                     /db_xref="CDD:443802"
     Region          579..>689
                     /region_name="aceF"
                     /note="pyruvate dehydrogenase dihydrolipoyltransacetylase;
                     Validated; PRK11854"
                     /db_xref="CDD:236999"
     Region          637..701
                     /region_name="biotinyl_domain"
                     /note="The biotinyl-domain or biotin carboxyl carrier
                     protein (BCCP) domain is present in all biotin-dependent
                     enzymes, such as acetyl-CoA carboxylase, pyruvate
                     carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA
                     carboxylase, geranyl-CoA carboxylase; cd06850"
                     /db_xref="CDD:133459"
     Site            order(658,667..669,676)
                     /site_type="active"
                     /note="carboxyltransferase (CT) interaction site [active]"
                     /db_xref="CDD:133459"
     Site            668
                     /site_type="other"
                     /note="biotinylation site [posttranslational
                     modification]"
                     /db_xref="CDD:133459"
     CDS             1..709
                     /gene="MCCC1"
                     /coded_by="XM_041467841.1:99..2228"
                     /db_xref="GeneID:121353740"
ORIGIN      
        1 malaaaergl galrrlqwnq vrifvkwast igghsigkil ianrgeiacr vmrtakkmgv
       61 ksvavysead rnsmhvamad eaycigppps qqsylvmeki lqvakisaaq aihpgygfls
      121 entefaelck qqgiifigpp ssairdmgik stskaimsaa gvpvvegyhg edqsdeclke
      181 harrigypvm ikavrggggk gmriahseke fldqlesarr eakksfndda mliekfvdnp
      241 rhvevqvfgd qhgnavylfe rdcsvqrrhq kiieeapgpg ispevrrrlg eaavkaakav
      301 nyvgagtvef imdsqhnfyf memntrlqve hpvtemitgt dlvewqlrva agekiplmqe
      361 eillqghafe ariyaedpnn nfmpgagpll hlstppadrf trietgvrqg devsvhydpm
      421 iaklvvwaed rqaalrklry slhqynivgl stnidfllsl sghpqfeagn vhtnfipqhh
      481 delfpakkat phevmcqaal glilkermlt dafrdqsddk fspfasstgr rinicytrkl
      541 slldgenivd vavsynqdgs ykmqiqdktf lisgeilkeg dslylrssvn gtvsksklvi
      601 ldntiylffp egsaqiglpv pkylsavssg aeqsgavapm tgtvekvfvk agdkvqigdp
      661 lmvmiamkme htirapkagv ikkvnfqega qanrhaplve fvdeeaesk
//
LOCUS       XP_041323776             403 aa            linear   VRT 06-MAY-2021
DEFINITION  arylacetamide deacetylase [Pyrgilauda ruficollis].
ACCESSION   XP_041323776
VERSION     XP_041323776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="arylacetamide deacetylase"
                     /calculated_mol_wt=44038
     Region          107..374
                     /region_name="Abhydrolase_3"
                     /note="alpha/beta hydrolase fold; pfam07859"
                     /db_xref="CDD:400284"
     CDS             1..403
                     /gene="AADAC"
                     /coded_by="XM_041467842.1:1..1212"
                     /db_xref="GeneID:121353741"
ORIGIN      
        1 mgarllwlcl ltallgyyiy splpeelaqp gtvmlvsaal ralghlseaa ellglmhyme
       61 glrlitavel vaatsdenvt vtdtefsgvp vrlylprrap gglrramvyf hgggwclgda
      121 gmhsydfmsr rtsnelnavv vsvnyrlapp hrfpaqfedv ysvtkfflqs kvlsqygvdp
      181 arvcvagdsa ggnlaaavaq qlsedpevkt klkaqvliyp alqaldldlp syrdnahkpl
      241 lprslmvrfw seyftsdpal reamasnshv paeagpllqf vnwsrwlpae mrkahayagp
      301 aaggaelars ypgfldpraa pllagearlr glprayiltc ehdvlrddga myagrlraag
      361 vpvthhhadd afhgamtflt wplelavghr lfsaclgwlr enl
//
LOCUS       XP_041323777             403 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323777
VERSION     XP_041323777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="UDP-GlcNAc:betaGal
                     beta-1,3-N-acetylglucosaminyltransferase 7"
                     /calculated_mol_wt=46871
     Region          153..344
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     CDS             1..403
                     /gene="B3GNT7"
                     /coded_by="XM_041467843.1:83..1294"
                     /db_xref="GeneID:121353742"
ORIGIN      
        1 mfqwkktiyk tvclsfllii tvtvlqrgma pnqfmqgqqq kelspseplk sqkrdnsfsi
       61 sssfwktkke eapvkeesvm akqtkswdvt ttncsanqnf skvdwfkgle pnfqqfllyr
      121 hcryfpmlin hpekcsgdvy llivvksiit qhdrreairr twgqekeveg krirtlfllg
      181 taskeeeran hqklldyenh iygdilqwdf ldsffnltlk evhflkwvdi ycdsvhfifk
      241 gdddvfvsps nilefledkk egenlfvgdv lyrarpirkk enkyyipsal ynkniyppya
      301 ggggfvmdga lakrlhkase tlelypiddv flgmclevlk vspvghegfk tfgivknkns
      361 kmnkepcfyr smlvvhkllp pellqmwdlv hsnltcsrkl nvl
//
LOCUS       XP_041323778             702 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323778
VERSION     XP_041323778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467844.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..702
                     /product="tumor protein 63 isoform X1"
                     /calculated_mol_wt=78973
     Region          199..380
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(266,269,330,334)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(267..269,271)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(331,333,340,365,367..369,372)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          413..453
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     Region          565..629
                     /region_name="SAM_tumor-p63"
                     /note="SAM domain of tumor-p63 proteins; cd09572"
                     /db_xref="CDD:188971"
     CDS             1..702
                     /gene="TP63"
                     /coded_by="XM_041467844.1:19..2127"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 mhghssmksg lrslsprrgw kemnfeaapf ttlpyypdpc iprfvetpsp fswkesyyhs
       61 amsqnsqpre flspeviqhi wdfleqpics vqpidlnfid gpsedgstnk ieismdcvrv
      121 qdtelndpmw pqytnlglln smdqqiqngs sstspynteh aqnsvtapsp yaqpsstfda
      181 lspspaipsn tdypgphsfd vsfqqsstak satwtystel kklycqiakt cpiqikvmtp
      241 ppqgaviram pvykkaehvt evvkrcpnhe lsrefnegqi appshlirve gnshaqyved
      301 pitgrqsvlv pyeppqvgte fttvlynfmc nsscvggmnr rpiliivtle trdgqvlgrr
      361 cfearicacp grdrkadeds irkqqvsdst kngdgtkrpf rqgthgiqmt sikkrrspdd
      421 ellylpvrgr etyemllkik eslelmqflp qhtietyrqq qqqqhqhllq kqtsmqsqss
      481 ygsnspplsk mnsmnklpsv sqlinpqqrn altpttipds mgtnipmmgt hmamtgdmng
      541 lsptqalppp lsmpstshct ppppypsdcs ivsflarlgc sscvdyfttq glttiyqieh
      601 ysmddlvslk ipeqfrhaiw kgildhrqlh dfsspphllr tpsgastvsv gssetrgerv
      661 idavrftlrq tisfpprdew ndfnfdmdar rnkqqrikee ge
//
LOCUS       XP_041323779             698 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323779
VERSION     XP_041323779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..698
                     /product="tumor protein 63 isoform X2"
                     /calculated_mol_wt=78504
     Region          199..380
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(266,269,330,334)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(267..269,271)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(331,333,340,365,367..369,372)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          409..449
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     Region          561..625
                     /region_name="SAM_tumor-p63"
                     /note="SAM domain of tumor-p63 proteins; cd09572"
                     /db_xref="CDD:188971"
     CDS             1..698
                     /gene="TP63"
                     /coded_by="XM_041467845.1:19..2115"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 mhghssmksg lrslsprrgw kemnfeaapf ttlpyypdpc iprfvetpsp fswkesyyhs
       61 amsqnsqpre flspeviqhi wdfleqpics vqpidlnfid gpsedgstnk ieismdcvrv
      121 qdtelndpmw pqytnlglln smdqqiqngs sstspynteh aqnsvtapsp yaqpsstfda
      181 lspspaipsn tdypgphsfd vsfqqsstak satwtystel kklycqiakt cpiqikvmtp
      241 ppqgaviram pvykkaehvt evvkrcpnhe lsrefnegqi appshlirve gnshaqyved
      301 pitgrqsvlv pyeppqvgte fttvlynfmc nsscvggmnr rpiliivtle trdgqvlgrr
      361 cfearicacp grdrkadeds irkqqvsdst kngdafrqgt hgiqmtsikk rrspddelly
      421 lpvrgretye mllkikesle lmqflpqhti etyrqqqqqq hqhllqkqts mqsqssygsn
      481 spplskmnsm nklpsvsqli npqqrnaltp ttipdsmgtn ipmmgthmam tgdmnglspt
      541 qalppplsmp stshctpppp ypsdcsivsf larlgcsscv dyfttqgltt iyqiehysmd
      601 dlvslkipeq frhaiwkgil dhrqlhdfss pphllrtpsg astvsvgsse trgervidav
      661 rftlrqtisf pprdewndfn fdmdarrnkq qrikeege
//
LOCUS       XP_041323780             692 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323780
VERSION     XP_041323780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..692
                     /product="tumor protein 63 isoform X3"
                     /calculated_mol_wt=77877
     Region          189..370
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(256,259,320,324)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(257..259,261)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(321,323,330,355,357..359,362)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          403..443
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     Region          555..619
                     /region_name="SAM_tumor-p63"
                     /note="SAM domain of tumor-p63 proteins; cd09572"
                     /db_xref="CDD:188971"
     CDS             1..692
                     /gene="TP63"
                     /coded_by="XM_041467846.1:121..2199"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 mlglsprrgw kemnfeaapf ttlpyypdpc iprfvetpsp fswkesyyhs amsqnsqpre
       61 flspeviqhi wdfleqpics vqpidlnfid gpsedgstnk ieismdcvrv qdtelndpmw
      121 pqytnlglln smdqqiqngs sstspynteh aqnsvtapsp yaqpsstfda lspspaipsn
      181 tdypgphsfd vsfqqsstak satwtystel kklycqiakt cpiqikvmtp ppqgaviram
      241 pvykkaehvt evvkrcpnhe lsrefnegqi appshlirve gnshaqyved pitgrqsvlv
      301 pyeppqvgte fttvlynfmc nsscvggmnr rpiliivtle trdgqvlgrr cfearicacp
      361 grdrkadeds irkqqvsdst kngdgtkrpf rqgthgiqmt sikkrrspdd ellylpvrgr
      421 etyemllkik eslelmqflp qhtietyrqq qqqqhqhllq kqtsmqsqss ygsnspplsk
      481 mnsmnklpsv sqlinpqqrn altpttipds mgtnipmmgt hmamtgdmng lsptqalppp
      541 lsmpstshct ppppypsdcs ivsflarlgc sscvdyfttq glttiyqieh ysmddlvslk
      601 ipeqfrhaiw kgildhrqlh dfsspphllr tpsgastvsv gssetrgerv idavrftlrq
      661 tisfpprdew ndfnfdmdar rnkqqrikee ge
//
LOCUS       XP_041323781             680 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323781
VERSION     XP_041323781.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467847.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..680
                     /product="tumor protein 63 isoform X4"
                     /calculated_mol_wt=76466
     Region          177..358
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(244,247,308,312)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(245..247,249)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(309,311,318,343,345..347,350)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          391..431
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     Region          543..607
                     /region_name="SAM_tumor-p63"
                     /note="SAM domain of tumor-p63 proteins; cd09572"
                     /db_xref="CDD:188971"
     CDS             1..680
                     /gene="TP63"
                     /coded_by="XM_041467847.1:193..2235"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 mnfeaapftt lpyypdpcip rfvetpspfs wkesyyhsam sqnsqprefl speviqhiwd
       61 fleqpicsvq pidlnfidgp sedgstnkie ismdcvrvqd telndpmwpq ytnlgllnsm
      121 dqqiqngsss tspyntehaq nsvtapspya qpsstfdals pspaipsntd ypgphsfdvs
      181 fqqsstaksa twtystelkk lycqiaktcp iqikvmtppp qgavirampv ykkaehvtev
      241 vkrcpnhels refnegqiap pshlirvegn shaqyvedpi tgrqsvlvpy eppqvgteft
      301 tvlynfmcns scvggmnrrp iliivtletr dgqvlgrrcf earicacpgr drkadedsir
      361 kqqvsdstkn gdgtkrpfrq gthgiqmtsi kkrrspddel lylpvrgret yemllkikes
      421 lelmqflpqh tietyrqqqq qqhqhllqkq tsmqsqssyg snspplskmn smnklpsvsq
      481 linpqqrnal tpttipdsmg tnipmmgthm amtgdmngls ptqalpppls mpstshctpp
      541 ppypsdcsiv sflarlgcss cvdyfttqgl ttiyqiehys mddlvslkip eqfrhaiwkg
      601 ildhrqlhdf sspphllrtp sgastvsvgs setrgervid avrftlrqti sfpprdewnd
      661 fnfdmdarrn kqqrikeege
//
LOCUS       XP_041323782             641 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041323782
VERSION     XP_041323782.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467848.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..641
                     /product="tumor protein 63 isoform X5"
                     /calculated_mol_wt=71895
     Region          138..319
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(205,208,269,273)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(206..208,210)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(270,272,279,304,306..308,311)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          352..392
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     Region          504..568
                     /region_name="SAM_tumor-p63"
                     /note="SAM domain of tumor-p63 proteins; cd09572"
                     /db_xref="CDD:188971"
     CDS             1..641
                     /gene="TP63"
                     /coded_by="XM_041467848.1:164..2089"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 msqnsqpref lspeviqhiw dfleqpicsv qpidlnfidg psedgstnki eismdcvrvq
       61 dtelndpmwp qytnlgllns mdqqiqngss stspynteha qnsvtapspy aqpsstfdal
      121 spspaipsnt dypgphsfdv sfqqsstaks atwtystelk klycqiaktc piqikvmtpp
      181 pqgaviramp vykkaehvte vvkrcpnhel srefnegqia ppshlirveg nshaqyvedp
      241 itgrqsvlvp yeppqvgtef ttvlynfmcn sscvggmnrr piliivtlet rdgqvlgrrc
      301 fearicacpg rdrkadedsi rkqqvsdstk ngdgtkrpfr qgthgiqmts ikkrrspdde
      361 llylpvrgre tyemllkike slelmqflpq htietyrqqq qqqhqhllqk qtsmqsqssy
      421 gsnspplskm nsmnklpsvs qlinpqqrna ltpttipdsm gtnipmmgth mamtgdmngl
      481 sptqalpppl smpstshctp pppypsdcsi vsflarlgcs scvdyfttqg lttiyqiehy
      541 smddlvslki peqfrhaiwk gildhrqlhd fsspphllrt psgastvsvg ssetrgervi
      601 davrftlrqt isfpprdewn dfnfdmdarr nkqqrikeeg e
//
LOCUS       XP_041323784             550 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323784
VERSION     XP_041323784.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467850.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..550
                     /product="tumor protein 63 isoform X6"
                     /calculated_mol_wt=61533
     Region          199..380
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(266,269,330,334)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(267..269,271)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(331,333,340,365,367..369,372)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          413..453
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     CDS             1..550
                     /gene="TP63"
                     /coded_by="XM_041467850.1:19..1671"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 mhghssmksg lrslsprrgw kemnfeaapf ttlpyypdpc iprfvetpsp fswkesyyhs
       61 amsqnsqpre flspeviqhi wdfleqpics vqpidlnfid gpsedgstnk ieismdcvrv
      121 qdtelndpmw pqytnlglln smdqqiqngs sstspynteh aqnsvtapsp yaqpsstfda
      181 lspspaipsn tdypgphsfd vsfqqsstak satwtystel kklycqiakt cpiqikvmtp
      241 ppqgaviram pvykkaehvt evvkrcpnhe lsrefnegqi appshlirve gnshaqyved
      301 pitgrqsvlv pyeppqvgte fttvlynfmc nsscvggmnr rpiliivtle trdgqvlgrr
      361 cfearicacp grdrkadeds irkqqvsdst kngdgtkrpf rqgthgiqmt sikkrrspdd
      421 ellylpvrgr etyemllkik eslelmqflp qhtietyrqq qqqqhqhllq kqtsmqsqss
      481 ygsnspplsk mnsmnklpsv sqlinpqqrn altpttipds mgtnrsgepq dpgavppchl
      541 eghpgppaap
//
LOCUS       XP_041323785             546 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041323785
VERSION     XP_041323785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..546
                     /product="tumor protein 63 isoform X7"
                     /calculated_mol_wt=61064
     Region          199..380
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(266,269,330,334)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(267..269,271)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(331,333,340,365,367..369,372)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          409..449
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     CDS             1..546
                     /gene="TP63"
                     /coded_by="XM_041467851.1:19..1659"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 mhghssmksg lrslsprrgw kemnfeaapf ttlpyypdpc iprfvetpsp fswkesyyhs
       61 amsqnsqpre flspeviqhi wdfleqpics vqpidlnfid gpsedgstnk ieismdcvrv
      121 qdtelndpmw pqytnlglln smdqqiqngs sstspynteh aqnsvtapsp yaqpsstfda
      181 lspspaipsn tdypgphsfd vsfqqsstak satwtystel kklycqiakt cpiqikvmtp
      241 ppqgaviram pvykkaehvt evvkrcpnhe lsrefnegqi appshlirve gnshaqyved
      301 pitgrqsvlv pyeppqvgte fttvlynfmc nsscvggmnr rpiliivtle trdgqvlgrr
      361 cfearicacp grdrkadeds irkqqvsdst kngdafrqgt hgiqmtsikk rrspddelly
      421 lpvrgretye mllkikesle lmqflpqhti etyrqqqqqq hqhllqkqts mqsqssygsn
      481 spplskmnsm nklpsvsqli npqqrnaltp ttipdsmgtn rsgepqdpga vppchleghp
      541 gppaap
//
LOCUS       XP_041323786             509 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein 63 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041323786
VERSION     XP_041323786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="tumor protein 63 isoform X8"
                     /calculated_mol_wt=57557
     Region          199..380
                     /region_name="P53"
                     /note="P53 DNA-binding domain; cd08367"
                     /db_xref="CDD:176262"
     Site            order(266,269,330,334)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:176262"
     Site            order(267..269,271)
                     /site_type="other"
                     /note="dimerization site [polypeptide binding]"
                     /db_xref="CDD:176262"
     Site            order(331,333,340,365,367..369,372)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176262"
     Region          413..453
                     /region_name="P53_tetramer"
                     /note="P53 tetramerization motif; pfam07710"
                     /db_xref="CDD:462238"
     CDS             1..509
                     /gene="TP63"
                     /coded_by="XM_041467852.1:19..1548"
                     /db_xref="GeneID:121353743"
ORIGIN      
        1 mhghssmksg lrslsprrgw kemnfeaapf ttlpyypdpc iprfvetpsp fswkesyyhs
       61 amsqnsqpre flspeviqhi wdfleqpics vqpidlnfid gpsedgstnk ieismdcvrv
      121 qdtelndpmw pqytnlglln smdqqiqngs sstspynteh aqnsvtapsp yaqpsstfda
      181 lspspaipsn tdypgphsfd vsfqqsstak satwtystel kklycqiakt cpiqikvmtp
      241 ppqgaviram pvykkaehvt evvkrcpnhe lsrefnegqi appshlirve gnshaqyved
      301 pitgrqsvlv pyeppqvgte fttvlynfmc nsscvggmnr rpiliivtle trdgqvlgrr
      361 cfearicacp grdrkadeds irkqqvsdst kngdgtkrpf rqgthgiqmt sikkrrspdd
      421 ellylpvrgr etyemllkik eslelmqflp qhtietyrqq qqqqhqhllq khllsacfrs
      481 eltdsrrdpp kqidailkhs sppnpsvyp
//
LOCUS       XP_041323787             142 aa            linear   VRT 06-MAY-2021
DEFINITION  osteocrin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323787
VERSION     XP_041323787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..142
                     /product="osteocrin isoform X1"
                     /calculated_mol_wt=15350
     Region          10..142
                     /region_name="Musclin"
                     /note="Insulin-resistance promoting peptide in skeletal
                     muscle; pfam11037"
                     /db_xref="CDD:463211"
     CDS             1..142
                     /gene="OSTN"
                     /coded_by="XM_041467853.1:151..579"
                     /db_xref="GeneID:121353745"
ORIGIN      
        1 mkafwqapqm lqfqlvvvhl alviallwwn sssvllaqaa peplepsaal gvgnhpiase
       61 eksatnlaak lfllddlvsl enevtetkkk rsfpgfgspi drissssvda kgkqrkvlel
      121 pkrrfgvpld rigvshlgnt rg
//
LOCUS       XP_041323788             133 aa            linear   VRT 06-MAY-2021
DEFINITION  osteocrin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323788
VERSION     XP_041323788.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467854.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..133
                     /product="osteocrin isoform X2"
                     /calculated_mol_wt=14262
     Region          1..133
                     /region_name="Musclin"
                     /note="Insulin-resistance promoting peptide in skeletal
                     muscle; pfam11037"
                     /db_xref="CDD:463211"
     CDS             1..133
                     /gene="OSTN"
                     /coded_by="XM_041467854.1:35..436"
                     /db_xref="GeneID:121353745"
ORIGIN      
        1 mlqfqlvvvh lalviallww nsssvllaqa apeplepsaa lgvgnhpias eeksatnlaa
       61 klfllddlvs lenevtetkk krsfpgfgsp idrissssvd akgkqrkvle lpkrrfgvpl
      121 drigvshlgn trg
//
LOCUS       XP_041323789             133 aa            linear   VRT 06-MAY-2021
DEFINITION  osteocrin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323789
VERSION     XP_041323789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..133
                     /product="osteocrin isoform X2"
                     /calculated_mol_wt=14262
     Region          1..133
                     /region_name="Musclin"
                     /note="Insulin-resistance promoting peptide in skeletal
                     muscle; pfam11037"
                     /db_xref="CDD:463211"
     CDS             1..133
                     /gene="OSTN"
                     /coded_by="XM_041467855.1:107..508"
                     /db_xref="GeneID:121353745"
ORIGIN      
        1 mlqfqlvvvh lalviallww nsssvllaqa apeplepsaa lgvgnhpias eeksatnlaa
       61 klfllddlvs lenevtetkk krsfpgfgsp idrissssvd akgkqrkvle lpkrrfgvpl
      121 drigvshlgn trg
//
LOCUS       XP_041323790             342 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-2-HS-glycoprotein [Pyrgilauda ruficollis].
ACCESSION   XP_041323790
VERSION     XP_041323790.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467856.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="alpha-2-HS-glycoprotein"
                     /calculated_mol_wt=36477
     Region          29..130
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
     Site            order(145,188..190,192)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          146..240
                     /region_name="Cystatin"
                     /note="Cystatin domain; pfam00031"
                     /db_xref="CDD:425431"
     CDS             1..342
                     /gene="AHSG"
                     /coded_by="XM_041467856.1:66..1094"
                     /db_xref="GeneID:121353746"
ORIGIN      
        1 mkalvalill vqlpihkavp aappaplgcd dpeseaaaev avnyinghsh hgykfalnri
       61 edirvvpqgp nndlifleld lletkcpils ptplanctvr sfaehavegd cdvkmqkvdg
      121 tlsvlaskch shadssedir kvcpdcplla rlndtevlet vsaalndyns kttdsylrll
      181 eigrakiqyh pghvvvtefa vgatncsaee akanvgacql lpedqsnfgf ctavmvksps
      241 qdlqvdcqly ghqpgvtyah pgqdtsagla psavgvtnhn lglfhnnpva sesssseilr
      301 srlsaksvtk ravaaqhdkv prpvgfvppp ppcpgkirhf di
//
LOCUS       XP_041323791             104 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase II inhibitor 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323791
VERSION     XP_041323791.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467857.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..104
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..104
                     /product="calcium/calmodulin-dependent protein kinase II
                     inhibitor 2 isoform X1"
                     /calculated_mol_wt=10877
     Region          1..>56
                     /region_name="CaM-KIIN"
                     /note="Calcium/calmodulin-dependent protein kinase II
                     inhibitor; pfam15170"
                     /db_xref="CDD:373618"
     CDS             1..104
                     /gene="CAMK2N2"
                     /coded_by="XM_041467857.1:528..842"
                     /db_xref="GeneID:121353747"
ORIGIN      
        1 msqvlpyged kvgrygaepe agelpfscrl qdtnaffggn qgkrppklgq igrakrgtad
       61 prlcpptppp ppgppacrtp tpssgatras gppswdrsaa prew
//
LOCUS       XP_041323792              79 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent protein kinase II inhibitor 2 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323792
VERSION     XP_041323792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..79
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..79
                     /product="calcium/calmodulin-dependent protein kinase II
                     inhibitor 2 isoform X2"
                     /calculated_mol_wt=8502
     Region          1..79
                     /region_name="CaM-KIIN"
                     /note="Calcium/calmodulin-dependent protein kinase II
                     inhibitor; pfam15170"
                     /db_xref="CDD:373618"
     CDS             1..79
                     /gene="CAMK2N2"
                     /coded_by="XM_041467858.1:531..770"
                     /db_xref="GeneID:121353747"
ORIGIN      
        1 msqvlpyged kvgrygaepe agelpfscrl qdtnaffggn qgkrppklgq igrakrvvie
       61 ddridevlkg mteksppgv
//
LOCUS       XP_041323793             707 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor eIF-2B subunit epsilon isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323793
VERSION     XP_041323793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="translation initiation factor eIF-2B subunit
                     epsilon isoform X1"
                     /calculated_mol_wt=80132
     Region          29..243
                     /region_name="eIF-2B_epsilon_N"
                     /note="The N-terminal domain of epsilon subunit of the
                     eIF-2B is a subfamily of glycosyltransferase 2; cd04197"
                     /db_xref="CDD:133040"
     Region          <308..>382
                     /region_name="glgC"
                     /note="glucose-1-phosphate adenylyltransferase;
                     Provisional; PRK02862"
                     /db_xref="CDD:179486"
     Region          347..425
                     /region_name="LbH_eIF2B_epsilon"
                     /note="eIF-2B epsilon subunit, central Left-handed
                     parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic
                     translation initiator, a guanine nucleotide exchange
                     factor (GEF) composed of five different subunits (alpha,
                     beta, gamma, delta and epsilon). eIF2B is...; cd05787"
                     /db_xref="CDD:100061"
     Region          532..702
                     /region_name="W2_eIF2B_epsilon"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 2B epsilon; cd11558"
                     /db_xref="CDD:211396"
     CDS             1..707
                     /gene="EIF2B5"
                     /coded_by="XM_041467859.1:26..2149"
                     /db_xref="GeneID:121353749"
ORIGIN      
        1 maargtarrg agggsargpd pqeepppplq avlvadsfnr rffpiskdrp rallpmanva
       61 midytleflt atgveetfvf ccwksaeike hlqkskwcrh tspntvrfvt sdlyrslgdv
      121 lrdvdakslv rsdfilvtgd vvsnfniska leehklrrkm eknvsvmtmi fkesspghha
      181 rckeddivia mdsatnrvlh yqrtqglkrf rfpmslfqns ienvevrhdl ldchisicsp
      241 qvaelftdnf dyqtrddfvr gllvneevlg nqihmhvtre dygahicnll myeavcsdii
      301 rrwvypltpe mnftddknqs ythskhniyr gvdvslghgs vleenvligq gtvigsncsi
      361 tnsvigqncr igdkvtldga vlwdrvhiad nveihhsvic deaevkekvk lkpccvlsfq
      421 vvvgpgitls egtvislhpp deeeedddqf sddsgvnkes kvklkgynkk dvgsegrgyl
      481 wkaddkneed eeeqrqslwg pamhseeese sdsdlsmgse epdsraaspq lddikvfqne
      541 vlgtlqrgee eniscdnlvl einslkyayn islkemmqvl skvilefplq qldanldsqn
      601 yfsallpllk nwtplfknyi krasdhlnal caieeffleh dslctsiakv lmtfyqleil
      661 eedvilnwfs lrdtsdkgkq lrknqrlqkf iqwleeaeee ssdgdqd
//
LOCUS       XP_041323794             652 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor eIF-2B subunit epsilon isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323794
VERSION     XP_041323794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467860.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..652
                     /product="translation initiation factor eIF-2B subunit
                     epsilon isoform X2"
                     /calculated_mol_wt=73454
     Region          29..243
                     /region_name="eIF-2B_epsilon_N"
                     /note="The N-terminal domain of epsilon subunit of the
                     eIF-2B is a subfamily of glycosyltransferase 2; cd04197"
                     /db_xref="CDD:133040"
     Region          <308..>382
                     /region_name="glgC"
                     /note="glucose-1-phosphate adenylyltransferase;
                     Provisional; PRK02862"
                     /db_xref="CDD:179486"
     Region          347..425
                     /region_name="LbH_eIF2B_epsilon"
                     /note="eIF-2B epsilon subunit, central Left-handed
                     parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic
                     translation initiator, a guanine nucleotide exchange
                     factor (GEF) composed of five different subunits (alpha,
                     beta, gamma, delta and epsilon). eIF2B is...; cd05787"
                     /db_xref="CDD:100061"
     Region          532..>650
                     /region_name="W2_eIF2B_epsilon"
                     /note="C-terminal W2 domain of eukaryotic translation
                     initiation factor 2B epsilon; cd11558"
                     /db_xref="CDD:211396"
     CDS             1..652
                     /gene="EIF2B5"
                     /coded_by="XM_041467860.1:26..1984"
                     /db_xref="GeneID:121353749"
ORIGIN      
        1 maargtarrg agggsargpd pqeepppplq avlvadsfnr rffpiskdrp rallpmanva
       61 midytleflt atgveetfvf ccwksaeike hlqkskwcrh tspntvrfvt sdlyrslgdv
      121 lrdvdakslv rsdfilvtgd vvsnfniska leehklrrkm eknvsvmtmi fkesspghha
      181 rckeddivia mdsatnrvlh yqrtqglkrf rfpmslfqns ienvevrhdl ldchisicsp
      241 qvaelftdnf dyqtrddfvr gllvneevlg nqihmhvtre dygahicnll myeavcsdii
      301 rrwvypltpe mnftddknqs ythskhniyr gvdvslghgs vleenvligq gtvigsncsi
      361 tnsvigqncr igdkvtldga vlwdrvhiad nveihhsvic deaevkekvk lkpccvlsfq
      421 vvvgpgitls egtvislhpp deeeedddqf sddsgvnkes kvklkgynkk dvgsegrgyl
      481 wkaddkneed eeeqrqslwg pamhseeese sdsdlsmgse epdsraaspq lddikvfqne
      541 vlgtlqrgee eniscdnlvl einslkyayn islkemmqvl skvilefplq qldanldsqn
      601 yfsallpllk nwtplfknyi krasdhlnal caieeffleh dslctsiakl pt
//
LOCUS       XP_041323795             489 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2J6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323795
VERSION     XP_041323795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="cytochrome P450 2J6-like"
                     /calculated_mol_wt=55765
     Region          61..484
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(120,124,131,178,293..294,297..298,301..302,305,356,
                     366,368,391,427..429,433..437,440..441)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410760"
     Site            order(204..205,293,296..297,301,364..367)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410760"
     CDS             1..489
                     /gene="LOC121353750"
                     /coded_by="XM_041467861.1:1..1470"
                     /db_xref="GeneID:121353750"
ORIGIN      
        1 mmisvilisl vlfllsaqfl nlqwksrgfp pgptpfpiig svwwinfrad hgslkklakt
       61 ygnictlwmg hrpmvvlygf qavkngltnn sedvsgrlqt yifnkmadgk gilvsngliw
      121 kqqrhfgigt lrklgmgnkg mergiqtear ylveffrdke geavdpsfpi vhavsnvica
      181 vvfghrfsle dktfrqliea fnhivafgns hfyymcemfp wfaehlpgpl hkarfsrdfv
      241 rsfvrqeiks hrekgridep edfidfylkq iektknvpns tfdednmvqs vfdlflggse
      301 ttattlrwal lymlvypdiq dkvqteldav lspshlicye drkklpytna vvheilrfss
      361 ivlitlprea vkdttvlgyr vpkgtliman vdsalfdpdy wetphqfnpg hfldkggnfv
      421 treaflafsa ghrvclgeal akmelfimfc sllqkfkftv pegvkeintd iifgstmkph
      481 pyklcavlr
//
LOCUS       XP_041323797             342 aa            linear   VRT 06-MAY-2021
DEFINITION  UAP56-interacting factor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323797
VERSION     XP_041323797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="UAP56-interacting factor isoform X1"
                     /calculated_mol_wt=37940
     Region          40..342
                     /region_name="FYTT"
                     /note="Forty-two-three protein; pfam07078"
                     /db_xref="CDD:462082"
     CDS             1..342
                     /gene="FYTTD1"
                     /coded_by="XM_041467863.1:16..1044"
                     /db_xref="GeneID:121353751"
ORIGIN      
        1 mrgpdwgrfg lreaamnafg aaaplpgssa aagarhggge svekidmsld diiklnkkee
       61 rkqyspkikr glqqnraqqf ssqgskwgmq qqkgrivels vflagygknr larrkkiagk
      121 krsygvitgl aakkavgshk gvsplnrqpl seknaqrnyp vlkrktnlqr qsemqrkqap
      181 alrrpallnr rnnmpstfvr ignklnqqkd trqatflfrr glkvqaqvqs tddldnqtgk
      241 rtrqwrtsst sggiltvsid npgaiispvs qklrltrspv ppflmkrdqs eekkipkgvp
      301 lqfdinsvgk qtgmtlnerf gilkeqrtal sqnkgsrfvt vg
//
LOCUS       XP_041323798             331 aa            linear   VRT 06-MAY-2021
DEFINITION  UAP56-interacting factor isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323798
VERSION     XP_041323798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="UAP56-interacting factor isoform X2"
                     /calculated_mol_wt=36754
     Region          40..331
                     /region_name="FYTT"
                     /note="Forty-two-three protein; pfam07078"
                     /db_xref="CDD:462082"
     CDS             1..331
                     /gene="FYTTD1"
                     /coded_by="XM_041467864.1:16..1011"
                     /db_xref="GeneID:121353751"
ORIGIN      
        1 mrgpdwgrfg lreaamnafg aaaplpgssa aagarhggge svekidmsld diiklnkkee
       61 rkqyspkikr glqqnraqqf ssqgskwgmq qqkgygknrl arrkkiagkk rsygvitgla
      121 akkavgshkg vsplnrqpls eknaqrnypv lkrktnlqrq semqrkqapa lrrpallnrr
      181 nnmpstfvri gnklnqqkdt rqatflfrrg lkvqaqvqst ddldnqtgkr trqwrtssts
      241 ggiltvsidn pgaiispvsq klrltrspvp pflmkrdqse ekkipkgvpl qfdinsvgkq
      301 tgmtlnerfg ilkeqrtals qnkgsrfvtv g
//
LOCUS       XP_041323799             315 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SOX-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323799
VERSION     XP_041323799.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467865.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="transcription factor SOX-2"
                     /calculated_mol_wt=34380
     Region          37..116
                     /region_name="HMG-box_SoxB"
                     /note="high mobility group (HMG)-box found in group B
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd01388"
                     /db_xref="CDD:438790"
     Site            order(38,40..41,43..47,51,54..55,62..67,70..71,74,77..78,
                     85,96,108..113)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438790"
     Region          108..198
                     /region_name="SOXp"
                     /note="SOX transcription factor; pfam12336"
                     /db_xref="CDD:463537"
     CDS             1..315
                     /gene="SOX2"
                     /coded_by="XM_041467865.1:255..1202"
                     /db_xref="GeneID:121353752"
ORIGIN      
        1 mynmmetelk ppapqqtsgg gtgnsnsaan nqknspdrvk rpmnafmvws rgqrrkmaqe
       61 npkmhnseis krlgaewkll seaekrpfid eakrlralhm kehpdykyrp rrktktlmkk
      121 dkytlpggll apgtntmttg vgvgatlgag vnqrmdsyah mngwtnggyg mmqeqlgypq
      181 hpglnahnaa qmqpmhrydv salqynsmts sqtymngspt ysmsysqqgt pgmalgsmgs
      241 vvktessssp pvvtssshsr apcqagdlrd mismylpgae vpepaapsrl hmsqhyqsap
      301 vpgtaingtl plshm
//
LOCUS       XP_041323800             949 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 39 [Pyrgilauda ruficollis].
ACCESSION   XP_041323800
VERSION     XP_041323800.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467866.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..949
                     /product="coiled-coil domain-containing protein 39"
                     /calculated_mol_wt=110517
     Region          <34..>323
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <184..>491
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          213..818
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     CDS             1..949
                     /gene="CCDC39"
                     /coded_by="XM_041467866.1:1..2850"
                     /db_xref="GeneID:121353753"
ORIGIN      
        1 meklssptaa svlaelqwep gyavpvanae nkaledelhk lrkekedlqn eltnceerie
       61 amtshlknvr qeinlsqsly kakeneiete hhfkalaere ygrlkndikr lkdeiaslre
      121 kkntqentin kttkklenlk qqmnwdeell eswlqelnrt dndavaiqky avqdegklgk
      181 ltlqiekltm eanqkhrald neltetitaq meldraaedf rrvhrerqev irqwenairq
      241 mqkrdqeidq calliaevkq eirnkeillr ektaflvnet vnnmeyekki ltaereannl
      301 rkefqaqdtr rtelqdelqt lksivnktas dleslrtqit nlkkeiqgkq arlkllnekn
      361 anlsdklkla ieetltaeek alrleeilke eeksveeken emrqlkdllf kktqelkvqs
      421 dkekiilaei eggqkslksl ksrlckldtd llkqqeliyn qdfyiqqiqr rlsrlegevn
      481 sdekevlegk aaelkktlee kkkaydvlqs lyrklqndvq itkrtidktr eeangvivki
      541 eeltlfners lqelkkakhi kqemmvednl lklelkrlrn tlcnkaekvl tlekqqlelk
      601 kviaerteei rihkamldsq irlldqerhr lsaefqdrlg kidklkhkye mftfsmmppe
      661 geemksqayy vikaaqekea lqqegddlda kicqaqkeim amenslcvlk nwnrhyknsf
      721 kavtetseer eeklklekdk kdadekykyk qrkikelqen lqsmqqhfdv iqkqqallke
      781 qkkekealil qlkkdieeqk pklnrvikqc sklsreiksq regepetlee rdihlrelka
      841 fnktvnqvia dvletnpglv aafqmyfdky dlelpmavsp sgsqtsqsle sslpatrvps
      901 rkssassqvs pakvveltla ipspeeaaal gsqpatrgsi sgishsrkt
//
LOCUS       XP_041323801             616 aa            linear   VRT 06-MAY-2021
DEFINITION  myoneurin [Pyrgilauda ruficollis].
ACCESSION   XP_041323801
VERSION     XP_041323801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..616
                     /product="myoneurin"
                     /calculated_mol_wt=69078
     Region          6..116
                     /region_name="BTB_POZ_ZBTB31_myoneurin"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in myoneurin;
                     cd18217"
                     /db_xref="CDD:349526"
     Region          307..328
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          308..328
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(313,315,317,319..320,323..324,327,341,343,347..348,
                     351..352,355,369,371,373,375..376,379..380,383)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          320..345
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          336..356
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          349..373
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          <358..442
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          364..384
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          393..413
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(398,400,402,404..405,408..409,412,426,428,432..433,
                     436..437,440,454,456,458,460..461,464..465,468)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          421..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          434..457
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          <443..526
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          449..469
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          477..497
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          505..526
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..616
                     /gene="MYNN"
                     /coded_by="XM_041467867.1:149..1999"
                     /db_xref="GeneID:121353754"
ORIGIN      
        1 mqyshhcehl lerlnkqrea gflcdctvvi gefqfkahrn vlasfseyfg afyrdasdnn
       61 vvldqtqvka dgfqkllefi ytgnlnldsw nvkeihqaad ylkveevvtk ckikmedfaf
      121 ianpsstets sitgnvemnq qtclltlrdy nnreekedaa aaelvppqak kaalekkspq
      181 pkkrkknfsp pkstenkslh yqnevaents femfldankl athiteqaaq gsdntelqla
      241 avvesetlaa qdilaqtmaa kqkrgkpqqs calkehcmsn iasdkstyql essgeeldqk
      301 fskakpvcnt cgkvfseass lrrhmrihkg vkpyvcqlcg kaftqcnqlk thvrthtgek
      361 pykcelcdkg faqkcqlvfh srmhhgeekp ykcdvcnlqf atssnlkiha rkhsgekpyv
      421 cdrcgqrfaq astltyhvrr htgekpyvcd scgkafavss slithsrkht gekpyicgic
      481 eksfissgel nkhfrshtge rpficemcgn sytdiknlkk hktkvhtgpe tspdstaldn
      541 sfneqesiqs qksplsesid vkpsemslal plpigtedhq mllpvtgsqs pssetllrsa
      601 vtgysepqfi flqqly
//
LOCUS       XP_041323802             343 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041323802
VERSION     XP_041323802.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467868.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="P2Y purinoceptor 13"
                     /calculated_mol_wt=38843
     Region          31..314
                     /region_name="7tmA_P2Y13"
                     /note="P2Y purinoceptor 13, member of the class A family
                     of seven-transmembrane G protein-coupled receptors;
                     cd15151"
                     /db_xref="CDD:341327"
     Region          31..58
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341327"
     Region          64..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341327"
     Site            order(98,102,106..107,110..111,114,157,160..161,164,168,
                     179..180,184,192,195..196,199,261,264,268,285)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:341327"
     Region          102..132
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341327"
     Region          144..166
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341327"
     Region          191..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341327"
     Region          234..264
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341327"
     Region          282..307
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341327"
     CDS             1..343
                     /gene="P2RY13"
                     /coded_by="XM_041467868.1:87..1118"
                     /db_xref="GeneID:121353755"
ORIGIN      
        1 mgdpantssv gnssgapspa qchrdtsvth llfpvlysli fllglvlnsl acwaffhips
       61 tstfivylkn ilvsdfimtl mlplkiltds glgpwqlkaf vcrfsavify dtmyisivll
      121 glialdrflk ivrpfgkfwv qnltsakila alvwlfflvl slpnmvlsnk ratpqsvrkc
      181 aslkshlglk whgavnyvcq fifwtvlilm llfyviiakk vyesyvktqk tgnrsekrik
      241 gkvfiiftvf fvcfapfhfs rvpytvsqts ahmdchlqnq lfvakestlw laatnvcmdp
      301 liymflckpf vekvfyrrvk alqravqtnp kteldtrvsp tes
//
LOCUS       XP_041323803            1207 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III domain-containing protein 3B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323803
VERSION     XP_041323803.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467869.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1207
                     /product="fibronectin type III domain-containing protein
                     3B isoform X1"
                     /calculated_mol_wt=132460
     Region          281..377
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          <350..646
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(366..367,369..370)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <569..950
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          817..>1130
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1207
                     /gene="FNDC3B"
                     /coded_by="XM_041467869.1:199..3822"
                     /db_xref="GeneID:121353756"
ORIGIN      
        1 myvtmmmtdq iplelpplln gevammphiv ngdgsqqvfl vqvnpgetft iraedgtlqc
       61 iqgpaevpmm spngsippih vppgyisqvi edstgvrrvv vtpqspecfp psypsaispt
      121 hhlppylahh phfihnshta fyppvtgpgd mppqffpqhh lpptiygeqe iiplygmssy
      181 itredqyskp qhkklkdrqi drqnrlnspp ssiykshigs cttvyngyak shngassggg
      241 aapalkkper rarsspksse qdphefdset krvqdilsgm ekpqvtniqa rtvllswspp
      301 pgllnadrhn nglpytctye valsdkgrdg kykiiysgee leyhlkdlrp atdyhvrvya
      361 tynsvkgscs epvsfttpss apespfppkt shrtkssltl qwkapidngs kitsyllewd
      421 egkrnsgfre cyfgsqkhck ltklcpalgy tfrlaaqndi gtsgysqevv cytagnipqt
      481 psaprlirag vtwislqwnk vegctpeevi sytleiqeed ndsvfhpkyt geeqactvkn
      541 lrrstqykfr lfasnvegks spsevlvctt spdrpgpptr pvikgpitsh gfsvkwdppq
      601 dnggseilky lleisqgspe anqwevaysg sateytcthl kpgtlyklra ccistgghsq
      661 cseslpvrtl svapgpcrpp rllgkprhre vqlqwdvpes esgcpvseys vemtapeevv
      721 sevyhgaele ctvgsllpga tyafrvraln dggygpysea teittaagpp gqcrapslsf
      781 lsdtrvlvsw especsgtdi seyrlewgee eeslqlaysg tetcfeisdl saatryccrl
      841 qainqagagp yselvtcrta asvpdavstl svledehvga cqpspsvclv lsweepsnng
      901 aeitsynidl gevsipvgnv tshviegllp etsyririqa vneigagpfs hfikaktrpl
      961 pplpprleca aagpqslklk wgdsssklhs addmvyilqi edrnkrfipi yrgpshtyki
     1021 qrltestcys friqavndag egpfseictf cttkslppai kaprvtqlgg nscevtwemv
     1081 ppmkgdpvgy vlqvlvgres eykqvykgee ttfhisglqv ntdyrfrvca crrcldpwqe
     1141 lsgpfspsva falqrsalvl agepggadda kakamvptde qfaalivlgf aslsiifaci
     1201 lqyffmk
//
LOCUS       XP_041323804            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III domain-containing protein 3B isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323804
VERSION     XP_041323804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="fibronectin type III domain-containing protein
                     3B isoform X2"
                     /calculated_mol_wt=125064
     Region          213..309
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          <282..578
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(298..299,301..302)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <501..882
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          749..>1062
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..1139
                     /gene="FNDC3B"
                     /coded_by="XM_041467870.1:152..3571"
                     /db_xref="GeneID:121353756"
ORIGIN      
        1 mmspngsipp ihvppgyisq viedstgvrr vvvtpqspec fppsypsais pthhlppyla
       61 hhphfihnsh tafyppvtgp gdmppqffpq hhlpptiyge qeiiplygms syitredqys
      121 kpqhkklkdr qidrqnrlns ppssiykshi gscttvyngy akshngassg ggaapalkkp
      181 errarsspks seqdphefds etkrvqdils gmekpqvtni qartvllsws pppgllnadr
      241 hnnglpytct yevalsdkgr dgkykiiysg eeleyhlkdl rpatdyhvrv yatynsvkgs
      301 csepvsfttp ssapespfpp ktshrtkssl tlqwkapidn gskitsylle wdegkrnsgf
      361 recyfgsqkh ckltklcpal gytfrlaaqn digtsgysqe vvcytagnip qtpsaprlir
      421 agvtwislqw nkvegctpee visytleiqe edndsvfhpk ytgeeqactv knlrrstqyk
      481 frlfasnveg ksspsevlvc ttspdrpgpp trpvikgpit shgfsvkwdp pqdnggseil
      541 kylleisqgs peanqwevay sgsateytct hlkpgtlykl raccistggh sqcseslpvr
      601 tlsvapgpcr pprllgkprh revqlqwdvp esesgcpvse ysvemtapee vvsevyhgae
      661 lectvgsllp gatyafrvra lndggygpys eateittaag ppgqcrapsl sflsdtrvlv
      721 swespecsgt diseyrlewg eeeeslqlay sgtetcfeis dlsaatrycc rlqainqaga
      781 gpyselvtcr taasvpdavs tlsvledehv gacqpspsvc lvlsweepsn ngaeitsyni
      841 dlgevsipvg nvtshviegl lpetsyriri qavneigagp fshfikaktr plpplpprle
      901 caaagpqslk lkwgdssskl hsaddmvyil qiedrnkrfi piyrgpshty kiqrltestc
      961 ysfriqavnd agegpfseic tfcttkslpp aikaprvtql ggnscevtwe mvppmkgdpv
     1021 gyvlqvlvgr eseykqvykg eettfhisgl qvntdyrfrv cacrrcldpw qelsgpfsps
     1081 vafalqrsal vlagepggad dakakamvpt deqfaalivl gfaslsiifa cilqyffmk
//
LOCUS       XP_041323805             601 aa            linear   VRT 06-MAY-2021
DEFINITION  protein kinase C iota type isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323805
VERSION     XP_041323805.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467871.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="protein kinase C iota type isoform X1"
                     /calculated_mol_wt=68178
     Region          31..113
                     /region_name="PB1_aPKC"
                     /note="PB1 domain is an essential modular domain of the
                     atypical protein kinase C (aPKC) which in complex with
                     Par6 and Par3 proteins is crucial for establishment of
                     apical-basal polarity of animal cells. PB1 domain is a
                     modular domain mediating specific...; cd06404"
                     /db_xref="CDD:99725"
     Site            order(77,79,81,90)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99725"
     Region          144..198
                     /region_name="C1_aPKC"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in the atypical protein kinase C (aPKC) family;
                     cd20794"
                     /db_xref="CDD:410344"
     Region          238..601
                     /region_name="STKc_aPKC_iota"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Atypical Protein Kinase C iota; cd05618"
                     /db_xref="CDD:270769"
     Site            order(265..269,273,286,288,321,337..338,340,344,346,383,
                     385,387..388,390,400..401,404,418..423,450,456,459)
                     /site_type="active"
                     /db_xref="CDD:270769"
     Site            order(265..269,273,286,288,321,338..340,344,383,385,
                     387..388,390,400..401)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270769"
     Site            order(269,344,346,383,385,387,404,418..423,450,456,459)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270769"
     Site            400..423
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270769"
     Site            569
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270769"
     Site            584..589
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270769"
     CDS             1..601
                     /gene="PRKCI"
                     /coded_by="XM_041467871.1:75..1880"
                     /db_xref="GeneID:121353758"
ORIGIN      
        1 mptqrdggag stmsapgglg gslggdgahq vrvkayykgd imityfepsi sfeglcsevr
       61 dmcsfdneql ftmkwideeg dpctvssqle leeafrlyel nkdsellihv fpcvperpgm
      121 pcpgedksiy rrgarrwrkl ycanghtfqa krfnrrahca ictdriwglg rqgykcinck
      181 llvhkkchkl vniecgrhtl qpepimpmdp ssvhsdnvet vipynpsshe sldhvgeeke
      241 amsiresgka ssslglqdfd llrvigrgsy akvllvrlkk teriyamkvv kkelvndded
      301 idwvqtekhv feqasnhpfl vglhscfqte srlffvieyv nggdlmfhmq rqrklpeeha
      361 rfysaeisla lnylhergii yrdlkldnvl ldseghiklt dygmckeglr pgdttstfcg
      421 tpnyiapeil rgedygfsvd wwalgvlmfe mmagrspfdi vgssdnpdqn tedylfqvil
      481 ekqiriprsl svkaagvlks flnkdpkerl gchpqtgfad iqghpffrnv dwdlmeqkqv
      541 vppfkpnisg efgldnfdsq ftnepvqltp ddddivkkid qsefegfeyi npllmsaeec
      601 v
//
LOCUS       XP_041323806             464 aa            linear   VRT 06-MAY-2021
DEFINITION  protein kinase C iota type isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323806
VERSION     XP_041323806.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467872.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="protein kinase C iota type isoform X2"
                     /calculated_mol_wt=52747
     Region          <19..61
                     /region_name="C1_aPKC"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in the atypical protein kinase C (aPKC) family;
                     cd20794"
                     /db_xref="CDD:410344"
     Region          101..464
                     /region_name="STKc_aPKC_iota"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Atypical Protein Kinase C iota; cd05618"
                     /db_xref="CDD:270769"
     Site            order(128..132,136,149,151,184,200..201,203,207,209,246,
                     248,250..251,253,263..264,267,281..286,313,319,322)
                     /site_type="active"
                     /db_xref="CDD:270769"
     Site            order(128..132,136,149,151,184,201..203,207,246,248,
                     250..251,253,263..264)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270769"
     Site            order(132,207,209,246,248,250,267,281..286,313,319,322)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270769"
     Site            263..286
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270769"
     Site            432
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270769"
     Site            447..452
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270769"
     CDS             1..464
                     /gene="PRKCI"
                     /coded_by="XM_041467872.1:140..1534"
                     /db_xref="GeneID:121353758"
ORIGIN      
        1 mcfrvsqsgl aclvqekira hcaictdriw glgrqgykci nckllvhkkc hklvniecgr
       61 htlqpepimp mdpssvhsdn vetvipynps shesldhvge ekeamsires gkassslglq
      121 dfdllrvigr gsyakvllvr lkkteriyam kvvkkelvnd dedidwvqte khvfeqasnh
      181 pflvglhscf qtesrlffvi eyvnggdlmf hmqrqrklpe eharfysaei slalnylher
      241 giiyrdlkld nvlldseghi kltdygmcke glrpgdttst fcgtpnyiap eilrgedygf
      301 svdwwalgvl mfemmagrsp fdivgssdnp dqntedylfq vilekqirip rslsvkaagv
      361 lksflnkdpk erlgchpqtg fadiqghpff rnvdwdlmeq kqvvppfkpn isgefgldnf
      421 dsqftnepvq ltpddddivk kidqsefegf eyinpllmsa eecv
//
LOCUS       XP_041323807             600 aa            linear   VRT 06-MAY-2021
DEFINITION  kininogen-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323807
VERSION     XP_041323807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="kininogen-1 isoform X1"
                     /calculated_mol_wt=67164
     Region          27..127
                     /region_name="CY"
                     /note="Cystatin-like domain; smart00043"
                     /db_xref="CDD:214484"
     Region          144..237
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cd00042"
                     /db_xref="CDD:238002"
     Site            order(144,188..190,192)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          261..361
                     /region_name="CY"
                     /note="Cystatin-like domain; smart00043"
                     /db_xref="CDD:214484"
     Site            order(263,307..309,311)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     CDS             1..600
                     /gene="KNG1"
                     /coded_by="XM_041467873.1:51..1853"
                     /db_xref="GeneID:121353759"
ORIGIN      
        1 mkafivlalc csffssraip lafefsdcdd pdvfkavdaa lkkyngdstt gnqfalyvvm
       61 eakrtagpdp qfyvkyrile stcateenkh wqhchykvsa eaktgectar vhmndadktt
      121 nvsqeckifs dvskirltea pclgcfhhis sdgsevseil kkaiqkfnkh sdelalfklv
      181 eikeakrqvv agwnyvirye ieetnctkdq fqdltpecki tsrgrvakce akafqnlqae
      241 ivdtasdckl pveetvvaai cpgcprtipn dspelkellk vstekynses nddfyykgge
      301 iqsatvqvva gkkyrvkftv wktncsksef eklnedctat snsaslscna qihvipwqnk
      361 iypqvncsee qqvvffarrp pgftpfrstv mlsqphavsh adknegesqs pstetrkdng
      421 qepegegepe hkhrhkhrhg vqkdhdndkr hrhdigcgrr sghgcghkkh nkknkhkhpn
      481 lksseesner gfnqnetlps ssaetalelv stgvareets rpteplivpd tslfnglpdr
      541 pesprprcpg kpwkqlvgfp appsfpreft nedllpsaae nsnpatenne edfdlrdala
//
LOCUS       XP_041323809             488 aa            linear   VRT 06-MAY-2021
DEFINITION  kininogen-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323809
VERSION     XP_041323809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..488
                     /product="kininogen-1 isoform X2"
                     /calculated_mol_wt=54544
     Region          27..127
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
     Region          144..237
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cd00042"
                     /db_xref="CDD:238002"
     Site            order(144,188..190,192)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          261..361
                     /region_name="CY"
                     /note="Cystatin-like domain; smart00043"
                     /db_xref="CDD:214484"
     Site            order(263,307..309,311)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     CDS             1..488
                     /gene="KNG1"
                     /coded_by="XM_041467875.1:51..1517"
                     /db_xref="GeneID:121353759"
ORIGIN      
        1 mkafivlalc csffssraip lafefsdcdd pdvfkavdaa lkkyngdstt gnqfalyvvm
       61 eakrtagpdp qfyvkyrile stcateenkh wqhchykvsa eaktgectar vhmndadktt
      121 nvsqeckifs dvskirltea pclgcfhhis sdgsevseil kkaiqkfnkh sdelalfklv
      181 eikeakrqvv agwnyvirye ieetnctkdq fqdltpecki tsrgrvakce akafqnlqae
      241 ivdtasdckl pveetvvaai cpgcprtipn dspelkellk vstekynses nddfyykgge
      301 iqsatvqvva gkkyrvkftv wktncsksef eklnedctat snsaslscna qihvipwqnk
      361 iypqvncsee qqvvffarrp pgftpfrstv mlsqphavsh adknegesqs pstetrkdng
      421 qepegedrpe sprprcpgkp wkqlvgfpap psfpreftne dllpsaaens npatenneed
      481 fdlrdala
//
LOCUS       XP_041323810             971 aa            linear   VRT 06-MAY-2021
DEFINITION  ephrin type-B receptor 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323810
VERSION     XP_041323810.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467876.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..971
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..971
                     /product="ephrin type-B receptor 3 isoform X1"
                     /calculated_mol_wt=108079
     Region          1..169
                     /region_name="EphR_LBD_B3"
                     /note="Ligand Binding Domain of Ephrin type-B Receptor 3;
                     cd10478"
                     /db_xref="CDD:198446"
     Site            order(5..7,9,21..24,26,30,32,34,37,70..72,76,78,124,126,
                     128..129,131..132,157,159,161)
                     /site_type="other"
                     /note="ephrin binding site [polypeptide binding]"
                     /db_xref="CDD:198446"
     Region          229..294
                     /region_name="TNFRSF"
                     /note="Tumor necrosis factor receptor superfamily
                     (TNFRSF); cd00185"
                     /db_xref="CDD:276900"
     Site            order(298,373,386)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          299..392
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(387..388,390..391)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          409..501
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(409,474,489)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(490..491,493..494)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <556..602
                     /region_name="EphA2_TM"
                     /note="Ephrin type-A receptor 2 transmembrane domain;
                     pfam14575"
                     /db_xref="CDD:464211"
     Region          601..869
                     /region_name="PTKc_EphR_B"
                     /note="Catalytic domain of the Protein Tyrosine Kinases,
                     Class EphB Ephrin Receptors; cd05065"
                     /db_xref="CDD:173638"
     Site            order(612..616,620,636,638,684..685,687,691,731,735..736,
                     738,749,770..774,783,817)
                     /site_type="active"
                     /db_xref="CDD:173638"
     Site            order(612..614,616,620,636,638,684..685,687,691,736,738,
                     749)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173638"
     Site            order(731,735,770..774,783,817)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173638"
     Site            748..776
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173638"
     Region          895..963
                     /region_name="SAM_EPH-B3"
                     /note="SAM domain of EPH-B3 subfamily of tyrosine kinase
                     receptors; cd09553"
                     /db_xref="CDD:188952"
     Site            order(915,948)
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:188952"
     CDS             1..971
                     /gene="EPHB3"
                     /coded_by="XM_041467876.1:55..2970"
                     /db_xref="GeneID:121353760"
ORIGIN      
        1 mdtkwvtsel awtthpetgw eevsgydeam npirtyqvcn vreanqnnwl rtkfiqrqdv
       61 qrvyvelkft vrdcnsipni pgscketfnl fyyesdtdsa sanspfwmen pyikvdtiap
      121 desfsklesg rvntkvrsfg plskngfyla fqdlgacmsl isvrafykkc sntiagfaif
      181 petltgaept slviapgtci pnavevsvpl klycngdgew mvpvgactca agyeptmkdt
      241 qcqacgpgtf kskqgegpcs pcppnsrtts gaamvctcrn gffradtdpa dsactsvpsa
      301 prnvisnvne tslvlewsep qdtggrddll ynvickkcsv errlctrcdd nvefvprqlg
      361 lterriyisn lmahtqytfe iqavngisnk spypphfasv nittnqaaps avptmhlhss
      421 tgnsmtlswt pperpngiil dyeikysekq gqsdgiantv tsqknsvrld glkanarymv
      481 qvrartvagy gryslptefq ttaeggstsk tfqelplivg sataglvfvi vvvviaivcf
      541 rkgmvtehll ssplgrkqrn ntdpeytekl qqyvtpgmkv yidpftyedp neavrefake
      601 idiscvkiee vigagefgev crgrlklpgr reifvaiktl kvgyterqrr dflseasimg
      661 qfdhpniihl egvvtksrpv miitefmenc aldsflrlnd gqftviqlvg mmrgiaagmk
      721 ylsemnyvhr dlaarnilvn snlvckvsdf glsrfleddp adptytsslg gkipirwtap
      781 eaiayrkfts asdvwsygiv mwevmsyger pywdmsnqdv inaveqdyrl pppmdcptal
      841 hqlmldcwvr drnlrpkfaq ivntldklir naaslkvias vqsgisqpll drtvpdyttf
      901 ttvgdwldai kmgrykenfv nagfasfdlv aqmtaedllr igvtlaghqk kilssiqdmr
      961 lqmnqtlpvq v
//
LOCUS       XP_041323811             956 aa            linear   VRT 06-MAY-2021
DEFINITION  ephrin type-B receptor 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323811
VERSION     XP_041323811.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467877.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..956
                     /product="ephrin type-B receptor 3 isoform X2"
                     /calculated_mol_wt=106472
     Region          1..169
                     /region_name="EphR_LBD_B3"
                     /note="Ligand Binding Domain of Ephrin type-B Receptor 3;
                     cd10478"
                     /db_xref="CDD:198446"
     Site            order(5..7,9,21..24,26,30,32,34,37,70..72,76,78,124,126,
                     128..129,131..132,157,159,161)
                     /site_type="other"
                     /note="ephrin binding site [polypeptide binding]"
                     /db_xref="CDD:198446"
     Region          229..294
                     /region_name="TNFRSF"
                     /note="Tumor necrosis factor receptor superfamily
                     (TNFRSF); cd00185"
                     /db_xref="CDD:276900"
     Site            order(298,373,386)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          299..392
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(387..388,390..391)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          409..501
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(409,474,489)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(490..491,493..494)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          518..587
                     /region_name="EphA2_TM"
                     /note="Ephrin type-A receptor 2 transmembrane domain;
                     pfam14575"
                     /db_xref="CDD:464211"
     Region          586..854
                     /region_name="PTKc_EphR_B"
                     /note="Catalytic domain of the Protein Tyrosine Kinases,
                     Class EphB Ephrin Receptors; cd05065"
                     /db_xref="CDD:173638"
     Site            order(597..601,605,621,623,669..670,672,676,716,720..721,
                     723,734,755..759,768,802)
                     /site_type="active"
                     /db_xref="CDD:173638"
     Site            order(597..599,601,605,621,623,669..670,672,676,721,723,
                     734)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173638"
     Site            order(716,720,755..759,768,802)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173638"
     Site            733..761
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173638"
     Region          880..948
                     /region_name="SAM_EPH-B3"
                     /note="SAM domain of EPH-B3 subfamily of tyrosine kinase
                     receptors; cd09553"
                     /db_xref="CDD:188952"
     Site            order(900,933)
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:188952"
     CDS             1..956
                     /gene="EPHB3"
                     /coded_by="XM_041467877.1:55..2925"
                     /db_xref="GeneID:121353760"
ORIGIN      
        1 mdtkwvtsel awtthpetgw eevsgydeam npirtyqvcn vreanqnnwl rtkfiqrqdv
       61 qrvyvelkft vrdcnsipni pgscketfnl fyyesdtdsa sanspfwmen pyikvdtiap
      121 desfsklesg rvntkvrsfg plskngfyla fqdlgacmsl isvrafykkc sntiagfaif
      181 petltgaept slviapgtci pnavevsvpl klycngdgew mvpvgactca agyeptmkdt
      241 qcqacgpgtf kskqgegpcs pcppnsrtts gaamvctcrn gffradtdpa dsactsvpsa
      301 prnvisnvne tslvlewsep qdtggrddll ynvickkcsv errlctrcdd nvefvprqlg
      361 lterriyisn lmahtqytfe iqavngisnk spypphfasv nittnqaaps avptmhlhss
      421 tgnsmtlswt pperpngiil dyeikysekq gqsdgiantv tsqknsvrld glkanarymv
      481 qvrartvagy gryslptefq ttaeggstsk tfqelplivg sataglvfvi vvvviaivcf
      541 rkqrnntdpe yteklqqyvt pgmkvyidpf tyedpneavr efakeidisc vkieevigag
      601 efgevcrgrl klpgrreifv aiktlkvgyt erqrrdflse asimgqfdhp niihlegvvt
      661 ksrpvmiite fmencaldsf lrlndgqftv iqlvgmmrgi aagmkylsem nyvhrdlaar
      721 nilvnsnlvc kvsdfglsrf leddpadpty tsslggkipi rwtapeaiay rkftsasdvw
      781 sygivmwevm sygerpywdm snqdvinave qdyrlpppmd cptalhqlml dcwvrdrnlr
      841 pkfaqivntl dklirnaasl kviasvqsgi sqplldrtvp dyttfttvgd wldaikmgry
      901 kenfvnagfa sfdlvaqmta edllrigvtl aghqkkilss iqdmrlqmnq tlpvqv
//
LOCUS       XP_041323812             781 aa            linear   VRT 06-MAY-2021
DEFINITION  tetratricopeptide repeat protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041323812
VERSION     XP_041323812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..781
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..781
                     /product="tetratricopeptide repeat protein 14"
                     /calculated_mol_wt=88454
     Region          122..205
                     /region_name="S1"
                     /note="Ribosomal protein S1-like RNA-binding domain;
                     smart00316"
                     /db_xref="CDD:197648"
     Region          288..>449
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Site            order(312..313,315,339,342..343,346..347,349..350,373,
                     376..377,380..381,384)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          337..367
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          372..407
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          413..447
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..781
                     /gene="TTC14"
                     /coded_by="XM_041467878.1:27..2372"
                     /db_xref="GeneID:121353761"
ORIGIN      
        1 mdrellrqal shhgpallsl lraeqhdnpd frgllpppga apepprgapp aawkerasid
       61 teimrfiakk adllfahswk pngpiedsie eneecyavmp plerflevpr eerrelffrd
      121 iergdivigr itsirefgff mvliclgsgv ireiadleit alcpvrdvpp qsnhgdplsy
      181 yqtgdliraa lkdvdryhek lavslyssal ppklsstklg vitsddfplh ykrslevant
      241 getfeevlhr spgfanpslv eylaeklgls esnppsllrs lqiknfseed fapalrkkqs
      301 aswalkcvka gvdyfkvgrh veamneynka leidpqnvea lvargalyat kgslnkaigd
      361 fevalencpt hrnarkylcq tlverggqle eeekllnaes yykkalslde tfqeaeealt
      421 klhkhmqksl emrekqaake erqkakkiet saeklrkllk eekrlkkkrk vstsssssss
      481 sssssssssd sssdvsasss ssssdhkkhr kkrrhrsesa rsskksssra sshykdqnrk
      541 eewysppadt sasflnqsfe vekllerqds vacpkmevke kdrhcsfsrt sgddedtlgg
      601 rsedsrdsys ssrsqpshsk tekyskperf fsswrgpsgs yhksdykprm hyyrrferdg
      661 ewrreqfkrh gsgqdryyms pgsdysgrsg gkyrshsssc shegdkgcds drrhkneses
      721 knrkisyedt dktkepdeev slngteeaas gvkrnlpqnl vnifnqiaef erekgskqkk
      781 q
//
LOCUS       XP_041323813            1589 aa            linear   VRT 06-MAY-2021
DEFINITION  multiple epidermal growth factor-like domains protein 6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323813
VERSION     XP_041323813.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467879.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1589
                     /product="multiple epidermal growth factor-like domains
                     protein 6"
                     /calculated_mol_wt=167799
     Region          27..98
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     Region          147..182
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          <179..222
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          <303..345
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          358..393
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          <391..431
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          <434..468
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          <813..938
                     /region_name="gliding_CglD"
                     /note="adventurous gliding motility lipoprotein CglD;
                     NF033765"
                     /db_xref="CDD:468178"
     CDS             1..1589
                     /gene="LOC121353762"
                     /coded_by="XM_041467879.1:1..4770"
                     /db_xref="GeneID:121353762"
ORIGIN      
        1 mragpallsv llgcalaaep rlqrgmpnvc pvlelalvgh qepciqsfsr mvrmwkqgct
       61 krrwcvsyer rsgyytvykq vyrmeqqtvy rccpgwaqqd kepgclhllc tagtcfnggk
      121 csgegsqvcq cpagfqgprc qydvnecttd nggchdrccn tigsyhckcp agqklgqdgk
      181 scadvdecev lnggcqqgcv ntqgsfqcqc rpgfrlhadg rtclavnscs innggceqdc
      241 vqlsedhyrc qcqpgyqlkt dakscevidp ctsgnggcsq icqhergiak cechpghsla
      301 adkkscldvd ecaegrarca hrcvntpgsf scacspgfel gadgrrcyri emeivdscqd
      361 gnggcehgce htaagprcsc hrghrlagda ktctdvdece tgesccsqfc inyaggyeca
      421 ckagfqlsad gcscddvdec rldngncdhf cvnslgsyec ackegyrlgd srwacvdvee
      481 adaeeaagla gapglhfrgp pqllrfalga laedgdprge ltlvhrvvcl gdtfgqdcsl
      541 rcedclhggh cnsersgcdc ppgragvicn etcppgmfgr gcagvcrcqn ggwcdpgtgq
      601 chcppgvlgq lcedgcpkgf fgkncnkpcn cankghchrl ygaclcdpgl ygrfchltcp
      661 rwafgagcse ecqcvkehtl ecsprngsct cqpgyhgkkc hkectqgfyg sgcklrcscp
      721 pdvlcdpetg ackhpcpagf hgekchlscq pgsfgmgcrq rcscggapcd prtgqcvcpa
      781 gktgamceqd cpdgqwgpdc qnscepcang gqcnretgac dcppgytgps csatcpdghy
      841 gqsclwlcsc gssaqchhvt gecscppgwt ghdckhpcss grwgrdcans cacdggdggc
      901 dpatgtcscq pgftgqhcql rcpegsfgpg cesscqcqng aacdhvsgac tctagwtgtf
      961 cekacpdgff gidchqvckc knaagcdhvl gschclpgwq gesceqpcqe nsygpgcrst
     1021 chchngalch hvtgtclcsp gwkgatcqea cppgwyganc lqrclchgqa tcdpvsgecq
     1081 cpqgwtgtac elecgdgqfg egceqncsch hgvcdqpsgk clchagwtgd rchvgcppgf
     1141 fgegceercd cahgwschpq tgachcqrgw rgrhcdkpcl pgrygagcar rcrcpagrpc
     1201 hhltgacgcp pgftghgchk tcpagtygqd chgvcqcsae nqechpvtgh cscspgyhga
     1261 hchlrcpegt ygsncqnpck cmngghcdpa sgtcdcapgf igancsktcp eswygkdcaq
     1321 pcacgrgrcd prtgecacap ghtgpacqqv cpqgqygpnc hlrctcqngg icdhvdgnct
     1381 cglgwtgrsc eeeclpgkyg agcsldclcq hngtcdrftg ccrcpegfyg hscehrcplg
     1441 fyglgclqtc ackngascda vtgqclcplg yhgihcekgc argwfgegcq hqcdcgdapc
     1501 dpetgkclcp pgktgdkcds gcradrygpg cslrcqcagr srcnphngnc acpsswmgpt
     1561 creggppklp fyeeqaqerg sifpralqq
//
LOCUS       XP_041323814             896 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 12 member 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323814
VERSION     XP_041323814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..896
                     /product="solute carrier family 12 member 9"
                     /calculated_mol_wt=97837
     Region          34..>698
                     /region_name="AA_permease_2"
                     /note="Amino acid permease; cl45918"
                     /db_xref="CDD:459263"
     CDS             1..896
                     /gene="SLC12A9"
                     /coded_by="XM_041467880.1:26..2716"
                     /db_xref="GeneID:121353763"
ORIGIN      
        1 massersall tyrlcggsae eergrergra aaaprklptf lgvvvptlls mfsvvlflrl
       61 gfvvghagly qalamfavay fiigmtvlsv caiatngald aggayymisr algpefggsi
      121 gimfflanvc gsalyvlglv eavvdsfgip pgqeagtgvh vlpqsywyel lygtvllalc
      181 llvclvgasi yakatflifl ivaavlgtil vsffatrplk vpirlpnang tetdngfftg
      241 fslstlrdnl ggeyrvdytt gqmmsfssvf avmfngctgi magsnmsgdl krpsysiprg
      301 tisavlftyl vynllaflmc atcnrtllqk dygflrdisi fpplvtvgiy aatlsaamsn
      361 ligasrilya larddlfgra lalakktsas gnpvmavils wlvvqvvlfs gklntiasvv
      421 tiffllvyat vnlaclalew asapnfrptf ryftwhtcll giagccvmmf lispvsasas
      481 lgflllllla lhylspsstw gyisqalifh qvrkyllmld vrkdhvkfwr pqmllmvqnp
      541 rgsarlidfv ndlkksglyv lghvelqdld mlpsdplqpq qdswlslvdk lnvkafvslt
      601 lapsvrhgvr qllftsglgg mrpntlvlgf yddeapqdgl arhpaftsar eevplgfppl
      661 rapttpkqls areyvgivad alkmlrnvll arqlesldka welrraaspp ptihvwpvnl
      721 lrpdsaryad tcslfllqma cvlnmarawr rarlrlflcv eagtmphaqe eklrqllkdl
      781 riqaqiqlvp wdaitclhwq tcqgppggpa eeeeeeegvv nfptnttlvs deyvcaankl
      841 vleqspapav rflylprppa dtslyplylh qlelltrglg ptvlvhgvsa vtstql
//
LOCUS       XP_041323815             340 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L47, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323815
VERSION     XP_041323815.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467881.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="39S ribosomal protein L47, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=38637
     Region          156..241
                     /region_name="MRP-L47"
                     /note="Mitochondrial 39-S ribosomal protein L47 (MRP-L47);
                     pfam06984"
                     /db_xref="CDD:369158"
     CDS             1..340
                     /gene="MRPL47"
                     /coded_by="XM_041467881.1:1..1023"
                     /db_xref="GeneID:121353764"
ORIGIN      
        1 maamartgkg rgrrrrcppr gevggrhhgk gqslpsapgs agphggeaar apswkragps
       61 lcsmyrgraq vrpgrrhlgk gqlpprapga vggrgamaaa aamaalgrsl taalrlprar
      121 palpgmalnl yhknlpkiei lqqvkllhtt vsrrgleeff ddpgnwgeks vksgdswnlk
      181 qlrgkssedl hklwyvllke rnmlltleqe srrqrkpmps perlekvets mknidlvvre
      241 reialrllqt ghekpvpgew rhdflgrtfw ysykewpipw hlnkkhkkkr ffylphvnhf
      301 irlrlekslr krarqqsler tkrkllerkf pdvavksqsq
//
LOCUS       XP_041323816             215 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L47, mitochondrial isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323816
VERSION     XP_041323816.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467882.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="39S ribosomal protein L47, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=25936
     Region          31..116
                     /region_name="MRP-L47"
                     /note="Mitochondrial 39-S ribosomal protein L47 (MRP-L47);
                     pfam06984"
                     /db_xref="CDD:369158"
     CDS             1..215
                     /gene="MRPL47"
                     /coded_by="XM_041467882.1:109..756"
                     /db_xref="GeneID:121353764"
ORIGIN      
        1 malnlyhknl pkieilqqvk llhttvsrrg leeffddpgn wgeksvksgd swnlkqlrgk
       61 ssedlhklwy vllkernmll tleqesrrqr kpmpsperle kvetsmknid lvvrereial
      121 rllqtghekp vpgewrhdfl grtfwysyke wpipwhlnkk hkkkrffylp hvnhfirlrl
      181 ekslrkrarq qslertkrkl lerkfpdvav ksqsq
//
LOCUS       XP_041323817             192 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5,
            mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041323817
VERSION     XP_041323817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="NADH dehydrogenase [ubiquinone] 1 beta
                     subcomplex subunit 5, mitochondrial"
                     /calculated_mol_wt=21521
     Region          1..192
                     /region_name="NDUF_B5"
                     /note="NADH:ubiquinone oxidoreductase, NDUFB5/SGDH
                     subunit; pfam09781"
                     /db_xref="CDD:430820"
     CDS             1..192
                     /gene="NDUFB5"
                     /coded_by="XM_041467883.1:2..580"
                     /db_xref="GeneID:121353766"
ORIGIN      
        1 maamsrvlra aaawaarrag sagstgiags tgiagigprl pgtlvpvrhs gdhgkrmfii
       61 katsfydsrf lsllrfylfl tgipvavllt yinvfvgeae laeipegyvp ehweyykhpi
      121 trwiaryvld ppeknyekdm alldvevrks elrllelear rlmrqrgdgp wyhyetpdkn
      181 lvdnsmkatp dn
//
LOCUS       XP_041323818             536 aa            linear   VRT 06-MAY-2021
DEFINITION  acetyl-coenzyme A transporter 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323818
VERSION     XP_041323818.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467884.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="acetyl-coenzyme A transporter 1 isoform X1"
                     /calculated_mol_wt=58386
     Site            order(66..67,70..71,103,171..172,174..176,179,195,
                     198..199,202,299,302..303,306..308,311,339,402..403,407,
                     411,431,434..435,438..439,442)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     Region          67..440
                     /region_name="2A0125"
                     /note="AmpG-like permease; TIGR00901"
                     /db_xref="CDD:273329"
     CDS             1..536
                     /gene="SLC33A1"
                     /coded_by="XM_041467884.1:36..1646"
                     /db_xref="GeneID:121353767"
ORIGIN      
        1 mapaiaaeeg grqrraatrq hsldltgdpp hdglpgdtea llpapargyr aelgsillll
       61 vlyvlqgipl glagsvplil qsknasytdq affsfvfwpf slkllwaplv davylrgfgr
      121 rkswlvptqy vlglfmiyms tqvdallgdg rgrgpdvaal tvtfflfefl aatqdiavdg
      181 waltmlsren vgyastcnsv gqtagyflgn vlflalesas fcnkylrfep qprgivtlsd
      241 flffwgavfl itttlvaflk kenqelipak eetkgitdty rllfsiikmp avltfcllil
      301 tskvgfsaad avtglklvee gvpkehlall avpmvplqii lplviskyta gpqplntfyk
      361 ampyrlllgl efaflvwwap kvkheggfpv yyyavvvlsy alhqitlysm yvaimafnak
      421 vsdpliggty mtllntvsnl ggnwpstval wlvdpltvke cagaqghtca taaatemllc
      481 slilvstfpv ksrgsgclps sgspveenke lavhrsnnrt qncwesnisn spphsk
//
LOCUS       XP_041323819             531 aa            linear   VRT 06-MAY-2021
DEFINITION  acetyl-coenzyme A transporter 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323819
VERSION     XP_041323819.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467885.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..531
                     /product="acetyl-coenzyme A transporter 1 isoform X2"
                     /calculated_mol_wt=58001
     Site            order(66..67,70..71,103,171..172,174..176,179,195,
                     198..199,202,299,302..303,306..308,311,339,402..403,407,
                     411,431,434..435,438..439,442)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     Region          67..440
                     /region_name="2A0125"
                     /note="AmpG-like permease; TIGR00901"
                     /db_xref="CDD:273329"
     CDS             1..531
                     /gene="SLC33A1"
                     /coded_by="XM_041467885.1:36..1631"
                     /db_xref="GeneID:121353767"
ORIGIN      
        1 mapaiaaeeg grqrraatrq hsldltgdpp hdglpgdtea llpapargyr aelgsillll
       61 vlyvlqgipl glagsvplil qsknasytdq affsfvfwpf slkllwaplv davylrgfgr
      121 rkswlvptqy vlglfmiyms tqvdallgdg rgrgpdvaal tvtfflfefl aatqdiavdg
      181 waltmlsren vgyastcnsv gqtagyflgn vlflalesas fcnkylrfep qprgivtlsd
      241 flffwgavfl itttlvaflk kenqelipak eetkgitdty rllfsiikmp avltfcllil
      301 tskvgfsaad avtglklvee gvpkehlall avpmvplqii lplviskyta gpqplntfyk
      361 ampyrlllgl efaflvwwap kvkheggfpv yyyavvvlsy alhqitlysm yvaimafnak
      421 vsdpliggty mtllntvsnl ggnwpstval wlvdpltvke cagaqghtca taaatelcta
      481 aggscvttld gyyvesivcv ilgfawwffl gpkfkklqde gqsswkckrs n
//
LOCUS       XP_041323822             502 aa            linear   VRT 06-MAY-2021
DEFINITION  acetyl-coenzyme A transporter 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323822
VERSION     XP_041323822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467888.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="acetyl-coenzyme A transporter 1 isoform X3"
                     /calculated_mol_wt=54621
     Site            order(66..67,70..71,103,171..172,174..176,179,195,
                     198..199,202,299,302..303,306..308,311,339,402..403,407,
                     411,431,434..435,438..439,442)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     Region          67..440
                     /region_name="2A0125"
                     /note="AmpG-like permease; TIGR00901"
                     /db_xref="CDD:273329"
     CDS             1..502
                     /gene="SLC33A1"
                     /coded_by="XM_041467888.1:36..1544"
                     /db_xref="GeneID:121353767"
ORIGIN      
        1 mapaiaaeeg grqrraatrq hsldltgdpp hdglpgdtea llpapargyr aelgsillll
       61 vlyvlqgipl glagsvplil qsknasytdq affsfvfwpf slkllwaplv davylrgfgr
      121 rkswlvptqy vlglfmiyms tqvdallgdg rgrgpdvaal tvtfflfefl aatqdiavdg
      181 waltmlsren vgyastcnsv gqtagyflgn vlflalesas fcnkylrfep qprgivtlsd
      241 flffwgavfl itttlvaflk kenqelipak eetkgitdty rllfsiikmp avltfcllil
      301 tskvgfsaad avtglklvee gvpkehlall avpmvplqii lplviskyta gpqplntfyk
      361 ampyrlllgl efaflvwwap kvkheggfpv yyyavvvlsy alhqitlysm yvaimafnak
      421 vsdpliggty mtllntvsnl ggnwpstval wlvdpltvke cagaqghtca taaatevfll
      481 pvsleasylp alipsprccs al
//
LOCUS       XP_041323823             493 aa            linear   VRT 06-MAY-2021
DEFINITION  acetyl-coenzyme A transporter 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323823
VERSION     XP_041323823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="acetyl-coenzyme A transporter 1 isoform X4"
                     /calculated_mol_wt=53623
     Site            order(66..67,70..71,103,171..172,174..176,179,195,
                     198..199,202,299,302..303,306..308,311,339,402..403,407,
                     411,431,434..435,438..439,442)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     Region          67..440
                     /region_name="2A0125"
                     /note="AmpG-like permease; TIGR00901"
                     /db_xref="CDD:273329"
     CDS             1..493
                     /gene="SLC33A1"
                     /coded_by="XM_041467889.1:36..1517"
                     /db_xref="GeneID:121353767"
ORIGIN      
        1 mapaiaaeeg grqrraatrq hsldltgdpp hdglpgdtea llpapargyr aelgsillll
       61 vlyvlqgipl glagsvplil qsknasytdq affsfvfwpf slkllwaplv davylrgfgr
      121 rkswlvptqy vlglfmiyms tqvdallgdg rgrgpdvaal tvtfflfefl aatqdiavdg
      181 waltmlsren vgyastcnsv gqtagyflgn vlflalesas fcnkylrfep qprgivtlsd
      241 flffwgavfl itttlvaflk kenqelipak eetkgitdty rllfsiikmp avltfcllil
      301 tskvgfsaad avtglklvee gvpkehlall avpmvplqii lplviskyta gpqplntfyk
      361 ampyrlllgl efaflvwwap kvkheggfpv yyyavvvlsy alhqitlysm yvaimafnak
      421 vsdpliggty mtllntvsnl ggnwpstval wlvdpltvke cagaqghtca taaateasyl
      481 palipsprcc sal
//
LOCUS       XP_041323824             802 aa            linear   VRT 06-MAY-2021
DEFINITION  mannan-binding lectin serine protease 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323824
VERSION     XP_041323824.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467890.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="mannan-binding lectin serine protease 1"
                     /calculated_mol_wt=89943
     Region          98..207
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(98,100,102,129,134,168,202,204,206..207)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          223..251
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          255..364
                     /region_name="CUB"
                     /note="CUB domain; pfam00431"
                     /db_xref="CDD:395345"
     Site            order(264,266,268,295,300,337,361,363,365..366)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          <359..>510
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          371..433
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(381,400)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          519..783
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; smart00020"
                     /db_xref="CDD:214473"
     Site            520
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(567,623,736)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(730,757,759)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..802
                     /gene="MASP1"
                     /coded_by="XM_041467890.1:1..2409"
                     /db_xref="GeneID:121353768"
ORIGIN      
        1 mwgtaagtgr rdlhgkcqta pdahthrrth arkspdrdka dsgalgkrqs lppqashrsc
       61 apnppgnaas stmryplawp fcalllcvad aveltdmfge iqspnfpdsy psdsemtwni
      121 svpdgfkikl yfmhfdless ylceydyvki etedqelatf cgrettdteq apgqqvilsp
      181 gpymgltfrs dfsneerftg fdahytavdv decqeksdee lacdhychny iggyycscrf
      241 gyilhsdnrt ckvecsdnly tqrsgvitsa dfpspypkss dclyrielee gffitlnfed
      301 sfdvedhpev tcpydhikik agqkefgpfc gekspgriet qtnsvqirfh sdnsgenrgw
      361 klsytaignp cplvqpping kiepsqakyt fkdqvviscn tgykvlkdnv esdsfqiecl
      421 kdgtwsnkip ickiadckap pelehgfvtf strnnlttyq aaiqyhcqhp yyhmapnsta
      481 tytcdalgqw rseelgtklp scrpvcgrpa rplpgiikri iggrnaepgf fpwqalivve
      541 dmsrvpndkw fgsgallses wvltaahvlr sqrrdktvip vskehvtvyl alhdvrnkme
      601 avnrtverii lheefdiqny nhdialvklk ekvtmgkyvm pvclpqfehe legphpntlg
      661 lvagwgisnp nitvdeiiss gmrtlsdilq yvklpvvlha ecktsyesrs gnysvtenmf
      721 cagyyeggkd tclgdsggaf viqdpgtrrw vaqglvswgg peecgskqvy gvytkvsnyv
      781 dwveqktgss erwtfldpel er
//
LOCUS       XP_041323825             709 aa            linear   VRT 06-MAY-2021
DEFINITION  B-cell lymphoma 6 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041323825
VERSION     XP_041323825.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467891.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="B-cell lymphoma 6 protein"
                     /calculated_mol_wt=79445
     Region          8..125
                     /region_name="BTB_POZ_ZBTB27_BCL6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in B-cell lymphoma
                     6 protein (BCL-6); cd18331"
                     /db_xref="CDD:349640"
     Site            order(8..14,17..18,21,24,28,51..55,58,114..116,120)
                     /site_type="other"
                     /note="co-repressor binding site [polypeptide binding]"
                     /db_xref="CDD:349640"
     Site            order(8..11,14..16,18..19,21..22,25,28,30..31,46..48,
                     51..53,58,67,89..90,93..97,116,120)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349640"
     Site            order(21,24..25,28,51..55,58,113..115)
                     /site_type="inhibition"
                     /note="inhibitor binding site [chemical binding]"
                     /db_xref="CDD:349640"
     Region          523..544
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          551..571
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          563..588
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(584,586,588,590..591,594..595,598,612,614,618..619,
                     622..623,626,640,642,644,646..647,650..651,654)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          591..616
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          619..644
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          648..672
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          663..681
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..709
                     /gene="BCL6"
                     /coded_by="XM_041467891.1:586..2715"
                     /db_xref="GeneID:121353769"
ORIGIN      
        1 maspadsciq ftrhasdvll nlnrlrsrdi ltdvviivnr eqfrahktvl macsglfysi
       61 ftdqlkcnln vinldpeinp egfcilldfm ytsrlnlren nimavmatal ylqmehvvdt
      121 crrfvkssea emvsavktpr eeflagrmlg hpevmayrsr dvsengmplq ngslcngraf
      181 apglinslsg spisyhgysp lplnsflvdd elremrmpls elsragafpk erilpcdssr
      241 tipteyvrti tdisanmcha tiyapkegaa eearsdmhys vasgpkpvip svrnnpyfpc
      301 dkvakeeert ssedeisqhf eptntpldrk glispqspqk sdcqpnspte ssssknarig
      361 qnssslftks ptdpkacnwk kykfivlnsl nqntkqdsad qnemgtlspr tyvpmstcqq
      421 smepehlnvq sptkisvnge dstipqasrl nnivnrsrdg sprssegqsp lymhsskcss
      481 cgcqspqhte mclhtpgsnf geemgetqse ysdsscenga ffcnecdcrf seeaslkrhs
      541 lqvhsdkpyk cdrcqasfry kgnlashktv htgekpyrcn icgaqfnrpa nlkthtrihs
      601 gekpykcetc garfvqvahl rahvlihtge kpypceicgt rfrhlqtlks hlrihtgekp
      661 yhcekcnlhf rhksqlrlhl rqkhgaitnt kvqyrisase vppelpkac
//
LOCUS       XP_041323826             709 aa            linear   VRT 06-MAY-2021
DEFINITION  B-cell lymphoma 6 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041323826
VERSION     XP_041323826.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467892.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="B-cell lymphoma 6 protein"
                     /calculated_mol_wt=79445
     Region          8..125
                     /region_name="BTB_POZ_ZBTB27_BCL6"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in B-cell lymphoma
                     6 protein (BCL-6); cd18331"
                     /db_xref="CDD:349640"
     Site            order(8..14,17..18,21,24,28,51..55,58,114..116,120)
                     /site_type="other"
                     /note="co-repressor binding site [polypeptide binding]"
                     /db_xref="CDD:349640"
     Site            order(8..11,14..16,18..19,21..22,25,28,30..31,46..48,
                     51..53,58,67,89..90,93..97,116,120)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349640"
     Site            order(21,24..25,28,51..55,58,113..115)
                     /site_type="inhibition"
                     /note="inhibitor binding site [chemical binding]"
                     /db_xref="CDD:349640"
     Region          523..544
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          551..571
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          563..588
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          579..599
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(584,586,588,590..591,594..595,598,612,614,618..619,
                     622..623,626,640,642,644,646..647,650..651,654)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          591..616
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          607..627
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          619..644
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          635..655
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          648..672
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          663..681
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..709
                     /gene="BCL6"
                     /coded_by="XM_041467892.1:589..2718"
                     /db_xref="GeneID:121353769"
ORIGIN      
        1 maspadsciq ftrhasdvll nlnrlrsrdi ltdvviivnr eqfrahktvl macsglfysi
       61 ftdqlkcnln vinldpeinp egfcilldfm ytsrlnlren nimavmatal ylqmehvvdt
      121 crrfvkssea emvsavktpr eeflagrmlg hpevmayrsr dvsengmplq ngslcngraf
      181 apglinslsg spisyhgysp lplnsflvdd elremrmpls elsragafpk erilpcdssr
      241 tipteyvrti tdisanmcha tiyapkegaa eearsdmhys vasgpkpvip svrnnpyfpc
      301 dkvakeeert ssedeisqhf eptntpldrk glispqspqk sdcqpnspte ssssknarig
      361 qnssslftks ptdpkacnwk kykfivlnsl nqntkqdsad qnemgtlspr tyvpmstcqq
      421 smepehlnvq sptkisvnge dstipqasrl nnivnrsrdg sprssegqsp lymhsskcss
      481 cgcqspqhte mclhtpgsnf geemgetqse ysdsscenga ffcnecdcrf seeaslkrhs
      541 lqvhsdkpyk cdrcqasfry kgnlashktv htgekpyrcn icgaqfnrpa nlkthtrihs
      601 gekpykcetc garfvqvahl rahvlihtge kpypceicgt rfrhlqtlks hlrihtgekp
      661 yhcekcnlhf rhksqlrlhl rqkhgaitnt kvqyrisase vppelpkac
//
LOCUS       XP_041323827             116 aa            linear   VRT 06-MAY-2021
DEFINITION  somatostatin [Pyrgilauda ruficollis].
ACCESSION   XP_041323827
VERSION     XP_041323827.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467893.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..116
                     /product="somatostatin"
                     /calculated_mol_wt=12558
     Region          99..116
                     /region_name="Somatostatin"
                     /note="Somatostatin/Cortistatin family; pfam03002"
                     /db_xref="CDD:367290"
     CDS             1..116
                     /gene="SST"
                     /coded_by="XM_041467893.1:333..683"
                     /db_xref="GeneID:121353770"
ORIGIN      
        1 mlscrlqcal allsialalg tvsaapsdpr lrqflqksla aaagkqelak yflaellsep
       61 sqteneales edlsrgaeqd evrlelersa nsnpalapre rkagcknffw ktftsc
//
LOCUS       XP_041323828             183 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rap-2b [Pyrgilauda ruficollis].
ACCESSION   XP_041323828
VERSION     XP_041323828.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467894.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="ras-related protein Rap-2b"
                     /calculated_mol_wt=20369
     Region          3..165
                     /region_name="Rap2"
                     /note="Rap2 family GTPase consists of Rap2a, Rap2b, and
                     Rap2c; cd04176"
                     /db_xref="CDD:133376"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133376"
     Site            order(11..12,59..60)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133376"
     Site            order(13..18,28..31,116..117,119,146..147)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133376"
     Site            order(17..18,32,34,40..41,54..55,57,59..60,148)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133376"
     Site            order(25,31,33,36..41)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133376"
     Site            33..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133376"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133376"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133376"
     Site            order(59..65,68..73,76..77)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133376"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133376"
     Site            146..148
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133376"
     CDS             1..183
                     /gene="RAP2B"
                     /coded_by="XM_041467894.1:173..724"
                     /db_xref="GeneID:121353771"
ORIGIN      
        1 mreykvvvlg sggvgksalt vqfvtgsfie kydptiedfy rkeievdssp svleildtag
       61 teqfasmrdl yikngqgfil vyslvnqqsf qdikpmrdqi irvkryervp milvgnkvdl
      121 egerevsfge gkalaeewsc pfmetsaknk asvdelfaei vrqmnyaaqp ngdepccasc
      181 ail
//
LOCUS       XP_041323829             400 aa            linear   VRT 06-MAY-2021
DEFINITION  fetuin-B [Pyrgilauda ruficollis].
ACCESSION   XP_041323829
VERSION     XP_041323829.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467895.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..400
                     /product="fetuin-B"
                     /calculated_mol_wt=44039
     Region          35..137
                     /region_name="CY"
                     /note="Cystatin-like domain; smart00043"
                     /db_xref="CDD:214484"
     Site            order(74..76,78)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     Region          150..257
                     /region_name="CY"
                     /note="Cystatin-like domain; smart00043"
                     /db_xref="CDD:214484"
     Site            order(152,196..198,200)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     CDS             1..400
                     /gene="FETUB"
                     /coded_by="XM_041467895.1:1..1203"
                     /db_xref="GeneID:121353772"
ORIGIN      
        1 mvwlawmlfg mqvlcpctaa ppspgagaal lcprcddaav eeaadlalrh inadreegyv
       61 lslyrivsar eqpqeitgsv fylildvvdt echvlskklw kncntrpahs tvygqckaii
      121 yinqarniah lntyectlqp vpgryiwsvc pdcpvddspt kpeyleaaar slakfngese
      181 qihyfsvlnv trasmqwvig payfvefliq etscskdetv adismceplp pevakigfck
      241 gsvvnsrveq fvtisceiys qqdpateeen qeanqtpgks mqdqqaspsd anhfsphlek
      301 tvgwvkilpp sneditfhsl resqnehkdr kpappkavgs ahscdgektq vnkpdltkpv
      361 tgpvilpfpe epslsdscpg kakqtegilh plitrkpfta
//
LOCUS       XP_041323830             127 aa            linear   VRT 06-MAY-2021
DEFINITION  urotensin-2B [Pyrgilauda ruficollis].
ACCESSION   XP_041323830
VERSION     XP_041323830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..127
                     /product="urotensin-2B"
                     /calculated_mol_wt=14438
     CDS             1..127
                     /gene="UTS2B"
                     /coded_by="XM_041467896.1:78..461"
                     /db_xref="GeneID:121353774"
ORIGIN      
        1 mllgsgnvek mwsaqlclgv ltiltmalcv psthgdpfll qenrvlpere dtnhentllt
       61 lllnkkfawr rpenidwela kkfeeleele klkdqlsaed gsevayales lsasqpkkra
      121 cfwkyci
//
LOCUS       XP_041323831             693 aa            linear   VRT 06-MAY-2021
DEFINITION  GMP synthase [glutamine-hydrolyzing] [Pyrgilauda ruficollis].
ACCESSION   XP_041323831
VERSION     XP_041323831.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467897.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..693
                     /product="GMP synthase [glutamine-hydrolyzing]"
                     /calculated_mol_wt=76427
     Region          28..693
                     /region_name="guaA"
                     /note="GMP synthase; Reviewed; PRK00074"
                     /db_xref="CDD:234614"
     CDS             1..693
                     /gene="GMPS"
                     /coded_by="XM_041467897.1:113..2194"
                     /db_xref="GeneID:121353775"
ORIGIN      
        1 malcngdtkp enagaelkdg qhhyegavvi ldagaqygkv idrrvrelfv qseifpletp
       61 afaireqgfr aiiisggpns vyaedapwfd paiftigkpv lgicygmqmm nkvfggtvhk
      121 ksvredgvfs itldntcslf rglqkeelvl lthgdsvdkv adgfkvvaqs gniiagiane
      181 skklygaqfh pevsltvngk milknflydi agcsgtftve nrelqciqdi kdkvgsskvl
      241 vllsggvdst vctallnral sreqviavhi dngfmrkres qaveealrkl gihvkvvnaa
      301 hsfyngtttl pisdedrtpr krisktlnmt tspeekrkii gdtfvkiane vigemnlkpe
      361 evflaqgtlr pdliesaslv asgkaevikt hhndtelirk lreegkviep lkdfhkdevr
      421 vlgrelglpe elvsrhpfpg pglairvica eepyvckdfp etnnilkiva dfsasvkkph
      481 tllqrvkact seedqeklmq itslhslnaf llpiktvgvq gdcrsysyvc gisskdaphw
      541 eslmflarli prmchninrv vyvfgppvke pptdvtptfl ttgvlstlrq adfeahnilr
      601 esgyagkisq mpiiltplhf drdplqkqps cqrsvvirpf itsdfmtgia atpgsevpee
      661 vvlkmvaeik kipgisrvmy dltskppgtt ewe
//
LOCUS       XP_041323832             687 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleolin [Pyrgilauda ruficollis].
ACCESSION   XP_041323832
VERSION     XP_041323832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467898.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="nucleolin"
                     /calculated_mol_wt=75083
     Region          282..356
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          369..445
                     /region_name="RRM2_NCL"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     nucleolin; cd12404"
                     /db_xref="CDD:409838"
     Site            order(369..370,375,377,399..402,409,411..413,442,444)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:409838"
     Region          457..529
                     /region_name="RRM3_NCL"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     nucleolin; cd12405"
                     /db_xref="CDD:409839"
     Region          549..626
                     /region_name="RRM4_NCL"
                     /note="RNA recognition motif 4 (RRM4) found in vertebrate
                     nucleolin; cd12406"
                     /db_xref="CDD:409840"
     CDS             1..687
                     /gene="NCL"
                     /coded_by="XM_041467898.1:103..2166"
                     /db_xref="GeneID:121353776"
ORIGIN      
        1 mvkitktpkn qikqkkmapp pkkfeeseee esseleessg eemvpqkkpq kvavtpakka
       61 atpakkvatp akkavtpakk vvatptpkka vtptpkkaav ltkgakngkn akkeeseeed
      121 dedddeddee eeedeedsde eeeppmpvkp aakkpaavpa kkpaavpakq eseeededee
      181 ddeddeeede sedeamdtap vpvkkttpak atpvkakave sedeedeeed ddeeedeeda
      241 eeesedekpv ketpgkrkke mtnksapepk kkkteekvqs afsvfvgnlv ctkefeelkt
      301 glreffgkkn ievtdvriga srrfgyvdfs saedldkalq mngkklmgle vklekaktke
      361 amkedkkerd artlflknlp yriteddire vfenasevri vmnkdgsskg mayiefktea
      421 eankaleekq gteiegravv idftgeksqq dhqkgesktl ivnnlsyaat evtlqevfkk
      481 aasikvpqnn qgrpkgyafv dfatvedare amnsynntei egrtirlefs sqkgnmnarg
      541 gggfgqqskt lfvrglsedt teetlresfe gsisarivtd rdtgsskgfg fvdfssaeda
      601 kaakeamedg eidgnkvild fakpkgdfqr gggfggrggr gggrggrggf ggrgggrggf
      661 ggrgggfrgg rggggdhkqq gkkikfe
//
LOCUS       XP_041323834             866 aa            linear   VRT 06-MAY-2021
DEFINITION  chloride channel protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323834
VERSION     XP_041323834.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467900.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..866
                     /product="chloride channel protein 2 isoform X1"
                     /calculated_mol_wt=95736
     Region          82..559
                     /region_name="ClC_1_like"
                     /note="ClC-1-like chloride channel proteins. This CD
                     includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is
                     expressed in skeletal muscle and its mutation leads to
                     both recessively and dominantly-inherited forms of muscle
                     stiffness or myotonia. ClC-K is...; cd03683"
                     /db_xref="CDD:239655"
     Site            order(153..157,195..199,449..453,545)
                     /site_type="active"
                     /note="putative Cl- selectivity filter [active]"
                     /db_xref="CDD:239655"
     Site            197
                     /site_type="active"
                     /note="putative pore gating glutamate residue [active]"
                     /db_xref="CDD:239655"
     Region          571..802
                     /region_name="CBS_pair_voltage-gated_CLC_euk_bac"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the
                     voltage gated CLC (chloride channel) in eukaryotes and
                     bacteria; cd04591"
                     /db_xref="CDD:341367"
     Site            order(577,579..581,603..605,781,793,795,797..798,801)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341367"
     Region          577..635
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     Site            order(603,618,622..623,626,759,781..783,797)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341367"
     Region          759..801
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     CDS             1..866
                     /gene="CLCN2"
                     /coded_by="XM_041467900.1:59..2659"
                     /db_xref="GeneID:121353777"
ORIGIN      
        1 maseseaqra lqyeqtlmyg rytqdlgtfa kdeaarlrlq eedtapprrp selleytqgr
       61 cahcrvcalq cqrfliskvg edwvflillg lvmalvswam dfaiatclqa qkwmyggldt
      121 nvllqymawv typtvlitfs agftqilapq avgsgipemk tilrgvvlke yltfktfvak
      181 vigltcalgs gmplgkegpf vhiasmcatl lsrflslfgg fyenearnie mlaaacavgv
      241 gccfaapigg vlfsievtst ffavrnywrg ffaatfsafi frvlavwnkd eetitalfkt
      301 rfrldfpfdl qelpafavig iasgfggalf vylnrkivqf mrrqktinrf lmkkrllfpa
      361 lvtliistlt fppgfgqfma gqltqkdtlv tlfdnqtwak qgindefeyl gileawlhpr
      421 snvfvtlvvf ilmkfwmsal attipvpcga fmpvfvigaa fgrlvgesma awfpdgihtd
      481 sniyrivpgg yavvgaaals gavthtvsta vivfeltgqi shilpvmiav ilanavaqsl
      541 qpslydsiir ikklpylpel gwghhekynv rvedimvrdi ryvtlnckyr dlqqvlhstk
      601 mknlplvesa esmillgsie rtqvgallss qlsphrrlmt lrqnvlsedg hrlsdssirf
      661 qistetssgt parpalrkpl kpalkrvpss padsppagst dhtgialksl fcanaatept
      721 eeemilgdkm tpaeirewee qqldqlvdfs sakidpapfq lvehtslhkt htifsllgld
      781 hafvtsigrl vgmvslkelr kaiegsltgk gvkvrpplas frdstastte adttalrqlw
      841 drhqhhhmpr eagpggdddd dtprgq
//
LOCUS       XP_041323835             701 aa            linear   VRT 06-MAY-2021
DEFINITION  chloride channel protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323835
VERSION     XP_041323835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..701
                     /product="chloride channel protein 2 isoform X2"
                     /calculated_mol_wt=77755
     Region          82..559
                     /region_name="ClC_1_like"
                     /note="ClC-1-like chloride channel proteins. This CD
                     includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is
                     expressed in skeletal muscle and its mutation leads to
                     both recessively and dominantly-inherited forms of muscle
                     stiffness or myotonia. ClC-K is...; cd03683"
                     /db_xref="CDD:239655"
     Site            order(153..157,195..199,449..453,545)
                     /site_type="active"
                     /note="putative Cl- selectivity filter [active]"
                     /db_xref="CDD:239655"
     Site            197
                     /site_type="active"
                     /note="putative pore gating glutamate residue [active]"
                     /db_xref="CDD:239655"
     Region          571..>634
                     /region_name="CBS_pair_SF"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains superfamily; cl15354"
                     /db_xref="CDD:449531"
     Region          577..634
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     CDS             1..701
                     /gene="CLCN2"
                     /coded_by="XM_041467901.1:59..2164"
                     /db_xref="GeneID:121353777"
ORIGIN      
        1 maseseaqra lqyeqtlmyg rytqdlgtfa kdeaarlrlq eedtapprrp selleytqgr
       61 cahcrvcalq cqrfliskvg edwvflillg lvmalvswam dfaiatclqa qkwmyggldt
      121 nvllqymawv typtvlitfs agftqilapq avgsgipemk tilrgvvlke yltfktfvak
      181 vigltcalgs gmplgkegpf vhiasmcatl lsrflslfgg fyenearnie mlaaacavgv
      241 gccfaapigg vlfsievtst ffavrnywrg ffaatfsafi frvlavwnkd eetitalfkt
      301 rfrldfpfdl qelpafavig iasgfggalf vylnrkivqf mrrqktinrf lmkkrllfpa
      361 lvtliistlt fppgfgqfma gqltqkdtlv tlfdnqtwak qgindefeyl gileawlhpr
      421 snvfvtlvvf ilmkfwmsal attipvpcga fmpvfvigaa fgrlvgesma awfpdgihtd
      481 sniyrivpgg yavvgaaals gavthtvsta vivfeltgqi shilpvmiav ilanavaqsl
      541 qpslydsiir ikklpylpel gwghhekynv rvedimvrdi ryvtlnckyr dlqqvlhstk
      601 mknlplvesa esmillgsie rtqvgallss qlsphrrlmt lrqnvlsedg hrlsdssirf
      661 qistetssgt parpalrkpl kpalkrvpss padsppgdwq h
//
LOCUS       XP_041323836             753 aa            linear   VRT 06-MAY-2021
DEFINITION  chloride channel protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323836
VERSION     XP_041323836.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467902.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="chloride channel protein 2 isoform X3"
                     /calculated_mol_wt=82803
     Region          1..446
                     /region_name="ClC_1_like"
                     /note="ClC-1-like chloride channel proteins. This CD
                     includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is
                     expressed in skeletal muscle and its mutation leads to
                     both recessively and dominantly-inherited forms of muscle
                     stiffness or myotonia. ClC-K is...; cd03683"
                     /db_xref="CDD:239655"
     Site            order(40..44,82..86,336..340,432)
                     /site_type="active"
                     /note="putative Cl- selectivity filter [active]"
                     /db_xref="CDD:239655"
     Site            84
                     /site_type="active"
                     /note="putative pore gating glutamate residue [active]"
                     /db_xref="CDD:239655"
     Region          458..689
                     /region_name="CBS_pair_voltage-gated_CLC_euk_bac"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the
                     voltage gated CLC (chloride channel) in eukaryotes and
                     bacteria; cd04591"
                     /db_xref="CDD:341367"
     Site            order(464,466..468,490..492,668,680,682,684..685,688)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341367"
     Region          464..522
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     Site            order(490,505,509..510,513,646,668..670,684)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341367"
     Region          646..688
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     CDS             1..753
                     /gene="CLCN2"
                     /coded_by="XM_041467902.1:231..2492"
                     /db_xref="GeneID:121353777"
ORIGIN      
        1 myggldtnvl lqymawvtyp tvlitfsagf tqilapqavg sgipemktil rgvvlkeylt
       61 fktfvakvig ltcalgsgmp lgkegpfvhi asmcatllsr flslfggfye nearniemla
      121 aacavgvgcc faapiggvlf sievtstffa vrnywrgffa atfsafifrv lavwnkdeet
      181 italfktrfr ldfpfdlqel pafavigias gfggalfvyl nrkivqfmrr qktinrflmk
      241 krllfpalvt liistltfpp gfgqfmagql tqkdtlvtlf dnqtwakqgi ndefeylgil
      301 eawlhprsnv fvtlvvfilm kfwmsalatt ipvpcgafmp vfvigaafgr lvgesmaawf
      361 pdgihtdsni yrivpggyav vgaaalsgav thtvstaviv feltgqishi lpvmiavila
      421 navaqslqps lydsiirikk lpylpelgwg hhekynvrve dimvrdiryv tlnckyrdlq
      481 qvlhstkmkn lplvesaesm illgsiertq vgallssqls phrrlmtlrq nvlsedghrl
      541 sdssirfqis tetssgtpar palrkplkpa lkrvpsspad sppagstdht gialkslfca
      601 naatepteee milgdkmtpa eireweeqql dqlvdfssak idpapfqlve htslhkthti
      661 fsllgldhaf vtsigrlvgm vslkelrkai egsltgkgvk vrpplasfrd stastteadt
      721 talrqlwdrh qhhhmpreag pggdddddtp rgq
//
LOCUS       XP_041323837             359 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protein FAM131A [Pyrgilauda ruficollis].
ACCESSION   XP_041323837
VERSION     XP_041323837.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467903.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..359
                     /product="LOW QUALITY PROTEIN: protein FAM131A"
                     /calculated_mol_wt=38101
     Region          85..350
                     /region_name="FAM131"
                     /note="Putative cell signalling; pfam15010"
                     /db_xref="CDD:464442"
     CDS             1..359
                     /gene="FAM131A"
                     /coded_by="XM_041467903.1:1..1080"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121353778"
ORIGIN      
        1 mrpggdvgga epavvpapgx ppgsmgcigs kttivavdtt lcvewkevka lsplsvarpl
       61 prlvrqasfd sqdflqvnve dtvemlpksr raltiqeiaa larsslhgis qvvkehvtkp
      121 tamaqgrvah liewkgwckp vespsalesa fssychlseg eqearfaagv aeqfaiaeak
      181 lrawssvdgd dsndesyded fmpstessqp teltgtmpas allrdllqgh lcqlgvrhgs
      241 cepesdssht lspetlcssl cslemvspse ltakllgslg gedlllpklp ppasqsalrg
      301 larlrcqdsl ysvsyaeacl sptedevvls kdfplrrkis dvassgvasl eeeeeaeep
//
LOCUS       XP_041323838             184 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock protein beta-7-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323838
VERSION     XP_041323838.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467904.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="heat shock protein beta-7-like"
                     /calculated_mol_wt=19678
     Region          88..166
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..184
                     /gene="LOC121353779"
                     /coded_by="XM_041467904.1:16..570"
                     /db_xref="GeneID:121353779"
ORIGIN      
        1 mgiwrwrlag ldpphgrapg lraagamasl ssastyrael lsaygpghge prfegdrrha
       61 pfgargqeaf gypespgamy pcslgtwvra qgdtyqvvad vsqfeppdiv vttsnchvai
      121 qaekvaedgt vcdtfthkcq lpedtdplsv sctlteagtl vitvrrrasa gqrpqllhrs
      181 eaml
//
LOCUS       XP_041323839            1129 aa            linear   VRT 06-MAY-2021
DEFINITION  DIS3-like exonuclease 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323839
VERSION     XP_041323839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1129
                     /product="DIS3-like exonuclease 2"
                     /calculated_mol_wt=126733
     Region          313..>385
                     /region_name="Rrp44_CSD1"
                     /note="Rrp44-like cold shock domain; pfam17216"
                     /db_xref="CDD:375054"
     Region          500..1007
                     /region_name="VacB"
                     /note="Exoribonuclease R [Transcription]; COG0557"
                     /db_xref="CDD:440323"
     Region          1031..1120
                     /region_name="Dis3l2_C_term"
                     /note="DIS3-like exonuclease 2 C terminal; pfam17877"
                     /db_xref="CDD:465547"
     CDS             1..1129
                     /gene="DIS3L2"
                     /coded_by="XM_041467905.1:101..3490"
                     /db_xref="GeneID:121353780"
ORIGIN      
        1 mdqlgsvrsa asaqgakegl skaaasqksa yarllqkhhs grfqsylnhi aqkmqleegf
       61 sndpsldvdl plrrglvkdn pvrnginmhs yspvrtshle qplpgfendk pqsalnrcsl
      121 kknaivspeg dleveedyyv yqrgtasgll nvsdslggra snslrhrgal qkssgsdere
      181 eedmwrkkhk krgrypantd taaghllteq fvedvlamna rknshlspgq aqgaekrgfa
      241 rtrnnsesar tpqnfdrkrq lsesqtetmn nsdsrinprq lgtprggcya tvptsgdrkn
      301 lnkptrgrkk sifeayvsre dvsaglkrge liqgplrinp kkyheafips pdgsrdifid
      361 gvvarnraln gdivvvkllp rdqwkvikpd gsdketevth esdvpedmlg tcvpqetakg
      421 daqspdviie aqfddndaeh gqdhlqdmlt ddikklsldt gekgkaagvt cvhrpkqddg
      481 pkvsdprllp deflqrtakv vyilekkhsr aatgfiklla drnselfkrc amfspvdhrv
      541 prvyvpladc ppdfvtkpea ysqmlficri vdwkedsnfa sgqlckslgq ageiepeseg
      601 ilteygvdfs dfspevlecl pqnlpwvisp aelakrrdlr keciftidps tardlddals
      661 ckqlpdgnle vgvhiadvsy fvleetaldk vaseratsvy lvqkvipmlp rllceelcsl
      721 npmrdrltfs viwkltpegk ildewfgrtv icscmklsyd haqsmidspg kvlspeelpp
      781 vspqhsiaei qeavlnlhrv aqrlrkqrft egalhldqmk lsftldqesg mpqgcyiyqy
      841 rdsnrlveef mllanmavah qiyrsfpeqa flrrhpppqt kllkdlmdfc nqvgleidfs
      901 sagtlhksls etfgadkysr arkevltymf srpmqmalyf ctgvlddetl fhhyalnvpf
      961 ythftspirr yadivvhrll saslgarspi kmekeaiqkq adhcndrkma skrvqelsad
     1021 lffsvfvrec gpleseamvm gvlskafdvl vlkfgvqkri ycnalplvdf rfqkagkkpe
     1081 ltllwepeel eeesvpqvit iftlvevvlt adggplkysa llkrpsldk
//
LOCUS       XP_041323840            1129 aa            linear   VRT 06-MAY-2021
DEFINITION  DIS3-like exonuclease 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323840
VERSION     XP_041323840.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467906.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1129
                     /product="DIS3-like exonuclease 2"
                     /calculated_mol_wt=126733
     Region          313..>385
                     /region_name="Rrp44_CSD1"
                     /note="Rrp44-like cold shock domain; pfam17216"
                     /db_xref="CDD:375054"
     Region          500..1007
                     /region_name="VacB"
                     /note="Exoribonuclease R [Transcription]; COG0557"
                     /db_xref="CDD:440323"
     Region          1031..1120
                     /region_name="Dis3l2_C_term"
                     /note="DIS3-like exonuclease 2 C terminal; pfam17877"
                     /db_xref="CDD:465547"
     CDS             1..1129
                     /gene="DIS3L2"
                     /coded_by="XM_041467906.1:86..3475"
                     /db_xref="GeneID:121353780"
ORIGIN      
        1 mdqlgsvrsa asaqgakegl skaaasqksa yarllqkhhs grfqsylnhi aqkmqleegf
       61 sndpsldvdl plrrglvkdn pvrnginmhs yspvrtshle qplpgfendk pqsalnrcsl
      121 kknaivspeg dleveedyyv yqrgtasgll nvsdslggra snslrhrgal qkssgsdere
      181 eedmwrkkhk krgrypantd taaghllteq fvedvlamna rknshlspgq aqgaekrgfa
      241 rtrnnsesar tpqnfdrkrq lsesqtetmn nsdsrinprq lgtprggcya tvptsgdrkn
      301 lnkptrgrkk sifeayvsre dvsaglkrge liqgplrinp kkyheafips pdgsrdifid
      361 gvvarnraln gdivvvkllp rdqwkvikpd gsdketevth esdvpedmlg tcvpqetakg
      421 daqspdviie aqfddndaeh gqdhlqdmlt ddikklsldt gekgkaagvt cvhrpkqddg
      481 pkvsdprllp deflqrtakv vyilekkhsr aatgfiklla drnselfkrc amfspvdhrv
      541 prvyvpladc ppdfvtkpea ysqmlficri vdwkedsnfa sgqlckslgq ageiepeseg
      601 ilteygvdfs dfspevlecl pqnlpwvisp aelakrrdlr keciftidps tardlddals
      661 ckqlpdgnle vgvhiadvsy fvleetaldk vaseratsvy lvqkvipmlp rllceelcsl
      721 npmrdrltfs viwkltpegk ildewfgrtv icscmklsyd haqsmidspg kvlspeelpp
      781 vspqhsiaei qeavlnlhrv aqrlrkqrft egalhldqmk lsftldqesg mpqgcyiyqy
      841 rdsnrlveef mllanmavah qiyrsfpeqa flrrhpppqt kllkdlmdfc nqvgleidfs
      901 sagtlhksls etfgadkysr arkevltymf srpmqmalyf ctgvlddetl fhhyalnvpf
      961 ythftspirr yadivvhrll saslgarspi kmekeaiqkq adhcndrkma skrvqelsad
     1021 lffsvfvrec gpleseamvm gvlskafdvl vlkfgvqkri ycnalplvdf rfqkagkkpe
     1081 ltllwepeel eeesvpqvit iftlvevvlt adggplkysa llkrpsldk
//
LOCUS       XP_041323841              78 aa            linear   VRT 06-MAY-2021
DEFINITION  serine palmitoyltransferase small subunit B [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323841
VERSION     XP_041323841.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467907.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..78
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..78
                     /product="serine palmitoyltransferase small subunit B"
                     /calculated_mol_wt=9159
     Region          <20..60
                     /region_name="SPT_ssu-like"
                     /note="Small subunit of serine palmitoyltransferase-like;
                     pfam11779"
                     /db_xref="CDD:463347"
     CDS             1..78
                     /gene="SPTSSB"
                     /coded_by="XM_041467907.1:1..237"
                     /db_xref="GeneID:121353781"
ORIGIN      
        1 mdvkrvkdyl ywlyyqyqlv tcsyvlepwe qsmfhtitvt vlamvvytay vfvpihvrla
       61 lqffsqifgp qpesavln
//
LOCUS       XP_041323842             232 aa            linear   VRT 06-MAY-2021
DEFINITION  clarin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323842
VERSION     XP_041323842.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467908.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..232
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..232
                     /product="clarin-1"
                     /calculated_mol_wt=25166
     CDS             1..232
                     /gene="CLRN1"
                     /coded_by="XM_041467908.1:132..830"
                     /db_xref="GeneID:121353784"
ORIGIN      
        1 mpaqqkkllf ctagvlslac algaaaavgs qlwvrgttlc stgallvnas gpelhkfigh
       61 iqyglfsgqr vrqcglggrp lqfsffpdll riipasihvs vivfctvliv falvgagffm
      121 fnafgspyet lhgpvglylw sfiscscgcl imilfssevk ihhlsekian fkegtftfkt
      181 hseqfansfw tilvcslvhf lnallirfag fefpfskskd setttgavdl my
//
LOCUS       XP_041323843             430 aa            linear   VRT 06-MAY-2021
DEFINITION  lysosome-associated membrane glycoprotein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323843
VERSION     XP_041323843.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467909.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..430
                     /product="lysosome-associated membrane glycoprotein 3"
                     /calculated_mol_wt=45165
     Region          <65..>286
                     /region_name="PRK13914"
                     /note="invasion associated endopeptidase"
                     /db_xref="CDD:237555"
     Region          240..377
                     /region_name="Lamp"
                     /note="Lysosome-associated membrane glycoprotein (Lamp);
                     cl46412"
                     /db_xref="CDD:480752"
     CDS             1..430
                     /gene="LAMP3"
                     /coded_by="XM_041467909.1:57..1349"
                     /db_xref="GeneID:121353785"
ORIGIN      
        1 mgrsarqlis ltlacafssc faevalgvel spettsfhqm atsaqplsly hssphqstav
       61 hftstgslqt tpmghrtaeq tteqlkttsa agqhtaaqag agtvptapad spspgrattp
      121 ampsltavvk ntttapvsst rhgkgprvtt gtvavatnts lkhetastpg aaatsasaap
      181 stpragpstr srrqtaatga ptatavtntt gthagtqtap tspastvrpr ptpqpsaipt
      241 gtytvsdgnr tcvkavmglq lmarntqqeq meyvtvnpna tkisgscgmv qselnltfsg
      301 gfvninfvkq apsysvtkie srillssegm lyyaalnekl fttklgnsfk casrqtfple
      361 knfqilfvhm qlqafdivgn qfgkeeecfl drngrvapia vclcilglfv ivfatflisr
      421 rkpqrgyeri
//
LOCUS       XP_041323845             750 aa            linear   VRT 06-MAY-2021
DEFINITION  serine protease 56 [Pyrgilauda ruficollis].
ACCESSION   XP_041323845
VERSION     XP_041323845.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467911.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..750
                     /product="serine protease 56"
                     /calculated_mol_wt=80159
     Region          152..382
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            152
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(192,241,336)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(330,357,359)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..750
                     /gene="PRSS56"
                     /coded_by="XM_041467911.1:1..2253"
                     /db_xref="GeneID:121353786"
ORIGIN      
        1 meqrgkrtrd gllgvrlvpp vlllpllqlv ggaplgqrly pmpasilqap avppamppsc
       61 qalldaqalp elpqrnwals qacapyqrlc ppegalhtct plsaqlcrhr lqecqtvaaa
      121 pspdaaaeaa mpgscgrrgv pqangttprg rimggsvapr gawpwlvsvr lhgelmcggv
      181 lvgrswvlta ahcfggnrne lawtvvvgdh elgkpgagkr avpvrrilph pkfnpktfhg
      241 dlallelavp lapsptvspv clpsgsaeps pgtpcyiagw gslyeegpaa dvvmeaqvpl
      301 lsqetcrgal gkdlltsamf cagylsggid scqgdsggpl acedptshrf vlygitswgd
      361 gcgergkpgv ytrvtaftdw lslqmdsapg slepscfdll avaqlppeqq spersrlcaf
      421 yagscrapqg ratcarvaee tchartrrce lhsyaqtlvd llhqagdfir nqfdfsfltr
      481 tlpqllgkiy ghffpprvrr dapglavagg qssrtavgpq rplsrwgdrr lppfadlfgl
      541 vgpqlqdwve alrtvaggsh lmttrdreql sgemqlflqg edvaeemlaq gqaflsqlra
      601 eldlgttlea mepqqasgel agtpvpshep rrekrelapt elprieeeee eeagvgracp
      661 glnesavrvg avrdlyawvl rvpeahlamt fqeilvdlgs kntkglyraq vratvggrpt
      721 aftglvgles dtlarsmpgl valalealkt
//
LOCUS       XP_041323846             417 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 34 [Pyrgilauda ruficollis].
ACCESSION   XP_041323846
VERSION     XP_041323846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467912.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="leucine-rich repeat-containing protein 34"
                     /calculated_mol_wt=45336
     Region          78..105
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <80..331
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     Region          106..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          134..161
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          162..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          190..220
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          221..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..276
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          277..305
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..417
                     /gene="LRRC34"
                     /coded_by="XM_041467912.1:1..1254"
                     /db_xref="GeneID:121353787"
ORIGIN      
        1 msvlpdlhlc yvqacqnlnq penpfiarvl qeadkneeis tkgitlklag nnhlvpvprv
       61 tdddlgvlvs vlgqaafvtg ldlaynlltd agaktmatfl qensslqyln lmfndigtsg
      121 aeliagalhs nqslvhlrmt gnkirnqggm ffasmlkins tlekldlgdc dvglqclvat
      181 aialtqnksl kainlnrpll ssqqeettvh iarmlrsnss lvelhlgkhe mknfgverlc
      241 dalyensslr yldlscnnii cdgvkflgel lkknqtleil dlsanriedv gaiylseala
      301 trnrtlkals vvsnnitgkg lvalaqamhs nmtlshiyiw gnkldrstcv afselimvgr
      361 lqqdctdvap yevdgqvlla elshglakhr ywsprsatva pgaanaslei vavseyl
//
LOCUS       XP_041323847             193 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041323847
VERSION     XP_041323847.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467913.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..193
                     /product="ADP-ribosylation factor-like protein 14"
                     /calculated_mol_wt=21766
     Region          15..173
                     /region_name="ARLTS1"
                     /note="Arf-like tumor suppressor gene 1 (ARLTS1 or Arl11);
                     cd04156"
                     /db_xref="CDD:133356"
     Site            19..26
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133356"
     Site            order(21..27,42..43,66,122..123,125,156..158)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133356"
     Site            order(21..22,26,30,42..49,72,77)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133356"
     Site            31..46
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133356"
     Site            order(43..47,52,63,67,73,75..77)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133356"
     Site            43
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133356"
     Site            order(44..51,62,73,76..77)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133356"
     Site            47..62
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:133356"
     Site            63..80
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133356"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133356"
     Site            122..125
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133356"
     Site            156..158
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133356"
     CDS             1..193
                     /gene="ARL14"
                     /coded_by="XM_041467913.1:84..665"
                     /db_xref="GeneID:121353788"
ORIGIN      
        1 mglqnakpst kaanivmlgl dsagkstlly kfrykdvfit mptigfnvdm ieagkdftlt
       61 fwdvggqkkm relwsnfled asgllyvvds sdkrrleesr kefelilkne siknvpvvvl
      121 ankqdlpgal naeeitrklk mkkycsdrnw yvqpccattg eglaealqrv atfarqykks
      181 ketfialkel nsf
//
LOCUS       XP_041323848             294 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor ligand superfamily member 10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323848
VERSION     XP_041323848.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467914.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="tumor necrosis factor ligand superfamily member
                     10"
                     /calculated_mol_wt=33166
     Site            order(131,190,192,256,261,287,291)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238108"
     Region          160..293
                     /region_name="TNF"
                     /note="TNF(Tumour Necrosis Factor) family; pfam00229"
                     /db_xref="CDD:425540"
     Site            order(162..163,169,220,227,231)
                     /site_type="active"
                     /note="receptor binding sites [active]"
                     /db_xref="CDD:238108"
     CDS             1..294
                     /gene="TNFSF10"
                     /coded_by="XM_041467914.1:153..1037"
                     /db_xref="GeneID:121353789"
ORIGIN      
        1 mlpaggpspa qtcgavlvaa vllqsvcvav tflyftselr qlqdsysksg iacltgeeig
       61 nsiqnlelie sedreadpcw qvkwhlgkli kkmmsrsyee nisainvert ltlphsegqq
      121 prgpvrriaa hltgsssrrs slssrinplp rrgighkinn wessrkghsf lynvelrnge
      181 lvipqtgfyy iysqiyfrfr enenedsdvl gqirnpkqlv qyvykltnyp epillmksar
      241 tscwskkaey glysiyqggv fqlkredrif vsvsnsdivd mdkeasffga fmis
//
LOCUS       XP_041323849             398 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein regulatory complex protein 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041323849
VERSION     XP_041323849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="dynein regulatory complex protein 9"
                     /calculated_mol_wt=46156
     Region          <89..>322
                     /region_name="46"
                     /note="endonuclease subunit; Provisional; PHA02562"
                     /db_xref="CDD:222878"
     Region          341..373
                     /region_name="IQCG"
                     /note="IQ (isoleucine-glutamine) motif containing G
                     (IQCG); cd23766"
                     /db_xref="CDD:467744"
     CDS             1..398
                     /gene="IQCG"
                     /coded_by="XM_041467915.1:72..1268"
                     /db_xref="GeneID:121353790"
ORIGIN      
        1 metggasrkn tetkqmekit hlealmfsav lescvdqlti lgyimpvphk dktdinhqtk
       61 emiqeelgin fpelmsaksg etvtstknte heqqqgkted qkstqhssks pkkhitrale
      121 klkkiyadrq yasdvitvti kkmeelgtfs sltdanerek akkgkfydil ireekgkkei
      181 kalqkqlqdv kkqtgqdlqs rddvidrlqd klqettakvn tesyymkknt dlqiqltqkk
      241 cssaenalek eiqnlkskid eeiqlhtete nflmqeyqkv kerleswiek ykkdttakde
      301 elddlralka enletmqrfa kecltfqtti iidrtdketk rkqreqeale lksavkvqaw
      361 wkgtmvrrfl gpyqvlekyl kelsaekdtg keksrakk
//
LOCUS       XP_041323850             221 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353791 [Pyrgilauda ruficollis].
ACCESSION   XP_041323850
VERSION     XP_041323850.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467916.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="uncharacterized protein LOC121353791"
                     /calculated_mol_wt=24903
     Region          <154..>214
                     /region_name="DUF4630"
                     /note="Domain of unknown function (DUF4630); pfam15443"
                     /db_xref="CDD:464720"
     CDS             1..221
                     /gene="LOC121353791"
                     /coded_by="XM_041467916.1:1401..2066"
                     /db_xref="GeneID:121353791"
ORIGIN      
        1 maskepasfv drttwdflnl ldmlgsrngr vgvmevdhae srapsllvdf trdlcgtgdi
       61 khkpqqaene gkeeedlvpp hlifmlwqas vlkrlmqwdh leeavrdvrs llpclphvlv
      121 lvmirpdsqe qldqavralr rmqcvldgal qltvetaiys pgqpggvlea kraacralre
      181 alncheevds qepfvislpe lrycrvlper rqekvsktdg e
//
LOCUS       XP_041323851             221 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353791 [Pyrgilauda ruficollis].
ACCESSION   XP_041323851
VERSION     XP_041323851.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467917.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="uncharacterized protein LOC121353791"
                     /calculated_mol_wt=24903
     Region          <154..>214
                     /region_name="DUF4630"
                     /note="Domain of unknown function (DUF4630); pfam15443"
                     /db_xref="CDD:464720"
     CDS             1..221
                     /gene="LOC121353791"
                     /coded_by="XM_041467917.1:1401..2066"
                     /db_xref="GeneID:121353791"
ORIGIN      
        1 maskepasfv drttwdflnl ldmlgsrngr vgvmevdhae srapsllvdf trdlcgtgdi
       61 khkpqqaene gkeeedlvpp hlifmlwqas vlkrlmqwdh leeavrdvrs llpclphvlv
      121 lvmirpdsqe qldqavralr rmqcvldgal qltvetaiys pgqpggvlea kraacralre
      181 alncheevds qepfvislpe lrycrvlper rqekvsktdg e
//
LOCUS       XP_041323852             110 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L35a [Pyrgilauda ruficollis].
ACCESSION   XP_041323852
VERSION     XP_041323852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467918.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..110
                     /product="60S ribosomal protein L35a"
                     /calculated_mol_wt=12464
     Region          5..103
                     /region_name="Ribosomal_L35Ae"
                     /note="Ribosomal protein L35Ae; pfam01247"
                     /db_xref="CDD:460132"
     CDS             1..110
                     /gene="RPL35A"
                     /coded_by="XM_041467918.1:148..480"
                     /db_xref="GeneID:121353792"
ORIGIN      
        1 mtgrlwckai fagykrglrn qrehtallki egvyarqetd fylgkrcayv ykaknntvtp
       61 ggkpnrtrvi wgkvtrahgn sgmvrakfrs nlpakaighr irvmlypsri
//
LOCUS       XP_041323853             312 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SIAH2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323853
VERSION     XP_041323853.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467919.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="E3 ubiquitin-protein ligase SIAH2"
                     /calculated_mol_wt=34084
     Region          63..113
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(68,71,82,86,89,92,99,102)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          110..306
                     /region_name="Sina"
                     /note="Seven in absentia protein family; pfam03145"
                     /db_xref="CDD:460824"
     CDS             1..312
                     /gene="SIAH2"
                     /coded_by="XM_041467919.1:24..962"
                     /db_xref="GeneID:121353793"
ORIGIN      
        1 msrpssagpg pskpcgkqqq hapspaavlp gtggaspppp pppplpppqq qqqqqqqqqq
       61 eltslfecpi cfdyvlppil qcqaghlvck qcrqqlslcp tcrgsltpni rnlamekvas
      121 avlfpckyat tgcsltlhht ekpkheaice yrpyscpcpg tscdwegsle avmshlmhah
      181 ksittlqged iiflatdinl pgavdwvmmq scfghhfmlv lkkqekcegh qqffatvlli
      241 gtrkqaenfq yrlelhssch rltweaspcs ihdgvhvair nsnclifdta tahlfadngn
      301 lginvtismc cp
//
LOCUS       XP_041323854             581 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 31 [Pyrgilauda ruficollis].
ACCESSION   XP_041323854
VERSION     XP_041323854.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467920.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="leucine-rich repeat-containing protein 31"
                     /calculated_mol_wt=64037
     Region          122..438
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          122..148
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Site            order(124,126,129,131,149,152,154,157,159,177,180,183,185,
                     205,208,210,213,216,233,236,238,241,243,261,264,266,269,
                     271,289,292,294,297,299,345,348,350,353,355,373,376,378,
                     381,401,404,406,409,411,429,432,434,437)
                     /site_type="active"
                     /note="Leucine-rich repeats [active]"
                     /db_xref="CDD:238064"
     Region          149..176
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Site            order(155..156,212,268,296,380,405,407,433)
                     /site_type="other"
                     /note="Substrate binding site [chemical binding]"
                     /db_xref="CDD:238064"
     Region          177..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..232
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..260
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          261..288
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          289..316
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          317..344
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          345..372
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..428
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          457..486
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..581
                     /gene="LRRC31"
                     /coded_by="XM_041467920.1:72..1817"
                     /db_xref="GeneID:121353794"
ORIGIN      
        1 mektddqncq drheennpks spfdfvikqf qgkkcapekr keqpsaikqf fkgfdfgkse
       61 gkdrreieet eisndgaddp seeedlsved gvshltseae sssgeqrfnq fmeklgkkps
      121 sknldlnnca lsaaditela sllpflpele eislswngcv ggtlkaltah lhhmnllkvl
      181 rlnncrltae dvislgeafe ivsqleeldl swnsniggkl slltkklqeg cklkclkitd
      241 cnltakdges laellnvipn leildisink nigcsmkvia qdlknvpglk elnlhmcglk
      301 qdslqgldta lqhlaelrkl discnreigg gfkastahla slknlevldl hqccvteedm
      361 tvlsqvipll snlqelnlss nknvglssdp llsrlrflpk lrsvtvsncg lgeeslssla
      421 eaalhlpele ildlswnkcv ggnlklllga lklateiqvl rlsscnlvae dlalltslrq
      481 dghlarlqkl dlsynnnisd kgwavfcqgl gafkelseld vslrpsscrd cgpwfgella
      541 altqlpalae lamqrwalse sqrkqmegfn qdnkrnirfd c
//
LOCUS       XP_041323856             529 aa            linear   VRT 06-MAY-2021
DEFINITION  histidine-rich glycoprotein [Pyrgilauda ruficollis].
ACCESSION   XP_041323856
VERSION     XP_041323856.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467922.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="histidine-rich glycoprotein"
                     /calculated_mol_wt=59163
     Region          24..128
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
     Region          152..233
                     /region_name="CY"
                     /note="Cystatin-like domain; Cystatins are a family of
                     cysteine protease inhibitors that occur mainly as single
                     domain proteins. However some extracellular proteins such
                     as kininogen, His-rich glycoprotein and fetuin also
                     contain these domains; cl09238"
                     /db_xref="CDD:447698"
     Site            order(187..189,191)
                     /site_type="active"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     CDS             1..529
                     /gene="HRG"
                     /coded_by="XM_041467922.1:1..1590"
                     /db_xref="GeneID:121353795"
ORIGIN      
        1 mlllasaffl tllqcsnaqn eisltpadcn tietdagval dlvnrhrrdg yvfglfrvad
       61 ahelhlgnst vlyltldvle tecsvlsrrh wesceysdty pmdfgqckii tytnhllkkp
      121 qlcgfnctls pvppdlveck dcpvkleale vteqhkdiaa kalrkfnseg nhtnnfavdk
      181 verilkmtas heghilgfsi ketncsksmq etdqalecdf lhdwhahtgf ckariisdad
      241 eadgtdisce iyhpwhhgcg rrgkhsalgh phrhphchhh fghrhrhkhh hrhecppssq
      301 srpeddehnp ktskkeqdsn kglsspppph depdhhhptp pphgpdhhhh eppcppphgp
      361 dhdhpphhhg ppcppphgpd hdhpphhhgp pcppprgpdh dhpphhhgpp cppppghpph
      421 hchhcfrhhh nktsisgkyf pchvtgavyr ipvlnqqdsl tpptanfpel sqcnlhfsst
      481 gskpkemaea pgfpdhptqs kscpgkpkld lpkilplfph sfvtenspi
//
LOCUS       XP_041323857             750 aa            linear   VRT 06-MAY-2021
DEFINITION  neprilysin [Pyrgilauda ruficollis].
ACCESSION   XP_041323857
VERSION     XP_041323857.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467923.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..750
                     /product="neprilysin"
                     /calculated_mol_wt=85237
     Region          77..748
                     /region_name="M13"
                     /note="Peptidase family M13 includes neprilysin and
                     endothelin-converting enzyme I; cd08662"
                     /db_xref="CDD:341056"
     Site            order(107,537,542..545,564,580..581,584..585,588,647,690,
                     693..694,711..712,718)
                     /site_type="active"
                     /db_xref="CDD:341056"
     CDS             1..750
                     /gene="MME"
                     /coded_by="XM_041467923.1:500..2752"
                     /db_xref="GeneID:121353796"
ORIGIN      
        1 mgksesqmdi temntpkpkk klgwsgleig lavvvvllai vaitmialya tyddgicktp
       61 dciksaaril enmdpsarpc qdfyqyacgg wlkrnvipet ssrysnfdil rdelevvlkd
      121 vldtpstndi pavqkaktly rscinetaid irggrplisl lpnvsewpva ttdwdasygt
      181 awtaetaiaq lnsrygkkvl inffvgtddk nstahiihid qpglglpsrd yyectgayqe
      241 acsayvdfmi svaklilqer nisvneseis aqmrrvmdle keianattks edrndpllly
      301 nkmtlaqlqn nfsleinhkv fnwsefinai mstvqinvdn tehvivydpd ylvklrsilv
      361 kyssrdlqny mawrfvmdlv nslsrdykdt rnafrkalyg ttsetavwrr canyvngnme
      421 savgrlyvee afagdskhvv eemiadirdv fiktldeltw mdaetkkrae qkaraireri
      481 gypdeivtdn dklnseyqel nykeeeyfen iiqnlvftqk krlkklrekv dkeewisgaa
      541 vvnafysasr nqivfpagil qppffsasqp kslnyggigm vigheithgf ddngrnfned
      601 gdlvdwwtee sarnfkelsq cmvyqygnfs wdlaggqnls gintlgenia dnggvrqayk
      661 ayenferkhg kekllpgldm nhkqlfflnf aqvwcgtyrp eyavnsiktd vhspgrfrvl
      721 gslqnspefs eafscttrdn mdpakkcrvw
//
LOCUS       XP_041323858            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323858
VERSION     XP_041323858.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467924.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467924.1:1460..4666"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323859            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323859
VERSION     XP_041323859.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467925.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467925.1:832..4038"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323860            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323860
VERSION     XP_041323860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467926.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467926.1:355..3561"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323861            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323861
VERSION     XP_041323861.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467927.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467927.1:936..4142"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323862            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323862
VERSION     XP_041323862.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467928.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467928.1:311..3517"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323863            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323863
VERSION     XP_041323863.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467929.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467929.1:224..3430"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323864            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323864
VERSION     XP_041323864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467930.1:112..3318"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323865            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323865
VERSION     XP_041323865.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467931.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467931.1:507..3713"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323866            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit
            alpha isoform [Pyrgilauda ruficollis].
ACCESSION   XP_041323866
VERSION     XP_041323866.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467932.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="phosphatidylinositol 4,5-bisphosphate 3-kinase
                     catalytic subunit alpha isoform"
                     /calculated_mol_wt=124076
     Region          34..107
                     /region_name="PI3K_p85B"
                     /note="PI3-kinase family, p85-binding domain; pfam02192"
                     /db_xref="CDD:460483"
     Region          173..292
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; cl02484"
                     /db_xref="CDD:413336"
     Region          325..484
                     /region_name="C2_PI3K_class_I_alpha"
                     /note="C2 domain present in class I alpha
                     phosphatidylinositol 3-kinases (PI3Ks); cd08398"
                     /db_xref="CDD:176043"
     Site            order(345..346,410,447..450,452,469)
                     /site_type="active"
                     /note="p110alpha-p85alpha complex [active]"
                     /db_xref="CDD:176043"
     Region          525..696
                     /region_name="PI3Ka_I"
                     /note="Phosphoinositide 3-kinase (PI3K) class I, accessory
                     domain; PIK domain is conserved in all PI3 and
                     PI4-kinases. Its role is unclear but it has been suggested
                     to be involved in substrate presentation. In general, PI3K
                     class I prefer phosphoinositol (4,5)...; cd00872"
                     /db_xref="CDD:238444"
     Region          695..1064
                     /region_name="PI3Kc_IA_alpha"
                     /note="Catalytic domain of Class IA Phosphoinositide
                     3-kinase alpha; cd05175"
                     /db_xref="CDD:270719"
     Site            order(772,774..776,778,780,800,802,805,836,848..851,856,
                     859,920,922,932..933)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270719"
     Site            889
                     /site_type="other"
                     /note="Ras binding site [polypeptide binding]"
                     /db_xref="CDD:270719"
     Site            912..920
                     /site_type="active"
                     /note="catalytic loop [active]"
                     /db_xref="CDD:270719"
     Site            933..957
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270719"
     Site            order(944..945,947,949,1017,1020,1029)
                     /site_type="other"
                     /note="regulatory subunit interface [polypeptide binding]"
                     /db_xref="CDD:270719"
     CDS             1..1068
                     /gene="PIK3CA"
                     /coded_by="XM_041467932.1:191..3397"
                     /db_xref="GeneID:121353797"
ORIGIN      
        1 mpprpssgel wgihlmppri lvecllpngm ivtleclrea tlltikhelf kearkyplyq
       61 llqdessyif vsvtqeaere effdetrrlc dlrlfqpflk viepvgnree kilnreigfa
      121 igmpvcefdm vkdpevqdfr rnilnvckea vdlrdanaph sralyvyppn vessaelpkh
      181 iynkldkgqi ivviwvivsp nndkqkytlk inhdcvpeqv iaeairkktr smllsseqlk
      241 lcvleyqgky ilkvcgcdey llekcplsqy kyirscimlg rmpnlmlmak eslytqlpld
      301 tftmpsysrr istatpymng eattkslwti nsalririlc atyvnvnird idkiyvrtgi
      361 yhggeplcdn vntqrvpcsn prwnewllyd myipdlpraa rlclsicsvk grkgakeehc
      421 plawgninmf dytdtlvsgk malnlwavph gledllnpig vtgsnpnket pclelefdwf
      481 snpvkfpdmt vieehanwti srelgfnysy agqsnriard seltesdkeq lraictrdpl
      541 seiteqekdf lwrhrhycvn tpeilpklll svkwnsrdev aqmyclvkdw psikpeqame
      601 lldcnypdpm vrafavrcle ksltddklsq yliqlvqvlk yeqyldnqlv rfllkkaltn
      661 qrighfffwh lksemhnktv sqrfgllles ycracgmylk hlsrqveame klinltdilk
      721 qekkdetqkv qmkflveqmr rpdfmdalqg fisplnpahq lgnlrleecr imssakrplw
      781 lnwenpdims ellfqnneii fkngddlrqd mltlqiirim eniwqnqgld lrmlpygcls
      841 igdcvgliev vrsshtimqi qckgglkgal qfnshtlhqw lkdknkgdmy daaidlftrs
      901 cagycvatfi lgigdrhnsn imvkddgqlf hidfghfldh kkkkfgykre rvpfvltqdf
      961 liviskgaqe ctktreferf qemcykayla irqhanlfin lfsmmlgsgm pelqsfddia
     1021 yirktlaldk teqealeyfm kqmndahhgg wttkmdwifh tikqhaln
//
LOCUS       XP_041323867             608 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323867
VERSION     XP_041323867.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467933.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="lipoma-preferred partner isoform X1"
                     /calculated_mol_wt=65039
     Region          <4..328
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <177..401
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          412..465
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(412,415,434,437,440,443,461,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          472..524
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(472,475,492,495,498,501,520,523)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          532..597
                     /region_name="LIM3_TRIP6"
                     /note="The third LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09436"
                     /db_xref="CDD:188820"
     Site            order(532,535,559,562,565,568,589,592)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188820"
     CDS             1..608
                     /gene="LOC121353799"
                     /coded_by="XM_041467933.1:1284..3110"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 mshpswlppk stnepvghvt armetthtfg tpsisvstqq tpkkfapvva pkpkynpykq
       61 pggdgdflpp ppppvddlgn itssqgafpp ppplddvtyn vqvnpggktl eerrcsldae
      121 idsltsilad lessspykpr tqqgsgtsss saattpsvst pvtghkrmii pnqppltatk
      181 kstakgpgqp apipvtpvgt lkpqpvpasy atastpsrpa fnvqvrtaqp sphyqppsqq
      241 pghygslgpg qpyatapsrq pagpqygapq pqgpsygygp ppgrpaepay gyappqgryq
      301 dpyyggyggr ngseapyvpq sswkaepayp asnamgqapp glyqpqgtkk tyitdpvlap
      361 qppalqqksg ysssgpasst pafrpedele hltkkmlydm enppsddyfg rcarcgenvv
      421 gegtgctamd qvfhvecftc imcntklrgq pfyavekkay cepcyintle qcsvcakpim
      481 erilratgka yhphcftcvm chrsldgipf tvdaggnihc iedfhkkfap rcsvckesim
      541 papgqeetvr ivaldrdfhv qcyrcedcgg llsegdnqgc ypldghilck tcnsariqal
      601 takastdl
//
LOCUS       XP_041323868             608 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323868
VERSION     XP_041323868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="lipoma-preferred partner isoform X1"
                     /calculated_mol_wt=65039
     Region          <4..328
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <177..401
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          412..465
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(412,415,434,437,440,443,461,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          472..524
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(472,475,492,495,498,501,520,523)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          532..597
                     /region_name="LIM3_TRIP6"
                     /note="The third LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09436"
                     /db_xref="CDD:188820"
     Site            order(532,535,559,562,565,568,589,592)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188820"
     CDS             1..608
                     /gene="LOC121353799"
                     /coded_by="XM_041467934.1:1235..3061"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 mshpswlppk stnepvghvt armetthtfg tpsisvstqq tpkkfapvva pkpkynpykq
       61 pggdgdflpp ppppvddlgn itssqgafpp ppplddvtyn vqvnpggktl eerrcsldae
      121 idsltsilad lessspykpr tqqgsgtsss saattpsvst pvtghkrmii pnqppltatk
      181 kstakgpgqp apipvtpvgt lkpqpvpasy atastpsrpa fnvqvrtaqp sphyqppsqq
      241 pghygslgpg qpyatapsrq pagpqygapq pqgpsygygp ppgrpaepay gyappqgryq
      301 dpyyggyggr ngseapyvpq sswkaepayp asnamgqapp glyqpqgtkk tyitdpvlap
      361 qppalqqksg ysssgpasst pafrpedele hltkkmlydm enppsddyfg rcarcgenvv
      421 gegtgctamd qvfhvecftc imcntklrgq pfyavekkay cepcyintle qcsvcakpim
      481 erilratgka yhphcftcvm chrsldgipf tvdaggnihc iedfhkkfap rcsvckesim
      541 papgqeetvr ivaldrdfhv qcyrcedcgg llsegdnqgc ypldghilck tcnsariqal
      601 takastdl
//
LOCUS       XP_041323869             608 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323869
VERSION     XP_041323869.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467935.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="lipoma-preferred partner isoform X1"
                     /calculated_mol_wt=65039
     Region          <4..328
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <177..401
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          412..465
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(412,415,434,437,440,443,461,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          472..524
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(472,475,492,495,498,501,520,523)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          532..597
                     /region_name="LIM3_TRIP6"
                     /note="The third LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09436"
                     /db_xref="CDD:188820"
     Site            order(532,535,559,562,565,568,589,592)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188820"
     CDS             1..608
                     /gene="LOC121353799"
                     /coded_by="XM_041467935.1:1416..3242"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 mshpswlppk stnepvghvt armetthtfg tpsisvstqq tpkkfapvva pkpkynpykq
       61 pggdgdflpp ppppvddlgn itssqgafpp ppplddvtyn vqvnpggktl eerrcsldae
      121 idsltsilad lessspykpr tqqgsgtsss saattpsvst pvtghkrmii pnqppltatk
      181 kstakgpgqp apipvtpvgt lkpqpvpasy atastpsrpa fnvqvrtaqp sphyqppsqq
      241 pghygslgpg qpyatapsrq pagpqygapq pqgpsygygp ppgrpaepay gyappqgryq
      301 dpyyggyggr ngseapyvpq sswkaepayp asnamgqapp glyqpqgtkk tyitdpvlap
      361 qppalqqksg ysssgpasst pafrpedele hltkkmlydm enppsddyfg rcarcgenvv
      421 gegtgctamd qvfhvecftc imcntklrgq pfyavekkay cepcyintle qcsvcakpim
      481 erilratgka yhphcftcvm chrsldgipf tvdaggnihc iedfhkkfap rcsvckesim
      541 papgqeetvr ivaldrdfhv qcyrcedcgg llsegdnqgc ypldghilck tcnsariqal
      601 takastdl
//
LOCUS       XP_041323871             608 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323871
VERSION     XP_041323871.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467937.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="lipoma-preferred partner isoform X1"
                     /calculated_mol_wt=65039
     Region          <4..328
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <177..401
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          412..465
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(412,415,434,437,440,443,461,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          472..524
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(472,475,492,495,498,501,520,523)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          532..597
                     /region_name="LIM3_TRIP6"
                     /note="The third LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09436"
                     /db_xref="CDD:188820"
     Site            order(532,535,559,562,565,568,589,592)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188820"
     CDS             1..608
                     /gene="LOC121353799"
                     /coded_by="XM_041467937.1:1220..3046"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 mshpswlppk stnepvghvt armetthtfg tpsisvstqq tpkkfapvva pkpkynpykq
       61 pggdgdflpp ppppvddlgn itssqgafpp ppplddvtyn vqvnpggktl eerrcsldae
      121 idsltsilad lessspykpr tqqgsgtsss saattpsvst pvtghkrmii pnqppltatk
      181 kstakgpgqp apipvtpvgt lkpqpvpasy atastpsrpa fnvqvrtaqp sphyqppsqq
      241 pghygslgpg qpyatapsrq pagpqygapq pqgpsygygp ppgrpaepay gyappqgryq
      301 dpyyggyggr ngseapyvpq sswkaepayp asnamgqapp glyqpqgtkk tyitdpvlap
      361 qppalqqksg ysssgpasst pafrpedele hltkkmlydm enppsddyfg rcarcgenvv
      421 gegtgctamd qvfhvecftc imcntklrgq pfyavekkay cepcyintle qcsvcakpim
      481 erilratgka yhphcftcvm chrsldgipf tvdaggnihc iedfhkkfap rcsvckesim
      541 papgqeetvr ivaldrdfhv qcyrcedcgg llsegdnqgc ypldghilck tcnsariqal
      601 takastdl
//
LOCUS       XP_041323872             608 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323872
VERSION     XP_041323872.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467938.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="lipoma-preferred partner isoform X1"
                     /calculated_mol_wt=65039
     Region          <4..328
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <177..401
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          412..465
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(412,415,434,437,440,443,461,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          472..524
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(472,475,492,495,498,501,520,523)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          532..597
                     /region_name="LIM3_TRIP6"
                     /note="The third LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09436"
                     /db_xref="CDD:188820"
     Site            order(532,535,559,562,565,568,589,592)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188820"
     CDS             1..608
                     /gene="LOC121353799"
                     /coded_by="XM_041467938.1:1367..3193"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 mshpswlppk stnepvghvt armetthtfg tpsisvstqq tpkkfapvva pkpkynpykq
       61 pggdgdflpp ppppvddlgn itssqgafpp ppplddvtyn vqvnpggktl eerrcsldae
      121 idsltsilad lessspykpr tqqgsgtsss saattpsvst pvtghkrmii pnqppltatk
      181 kstakgpgqp apipvtpvgt lkpqpvpasy atastpsrpa fnvqvrtaqp sphyqppsqq
      241 pghygslgpg qpyatapsrq pagpqygapq pqgpsygygp ppgrpaepay gyappqgryq
      301 dpyyggyggr ngseapyvpq sswkaepayp asnamgqapp glyqpqgtkk tyitdpvlap
      361 qppalqqksg ysssgpasst pafrpedele hltkkmlydm enppsddyfg rcarcgenvv
      421 gegtgctamd qvfhvecftc imcntklrgq pfyavekkay cepcyintle qcsvcakpim
      481 erilratgka yhphcftcvm chrsldgipf tvdaggnihc iedfhkkfap rcsvckesim
      541 papgqeetvr ivaldrdfhv qcyrcedcgg llsegdnqgc ypldghilck tcnsariqal
      601 takastdl
//
LOCUS       XP_041323873             608 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323873
VERSION     XP_041323873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467939.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="lipoma-preferred partner isoform X1"
                     /calculated_mol_wt=65039
     Region          <4..328
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <177..401
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          412..465
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(412,415,434,437,440,443,461,464)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          472..524
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(472,475,492,495,498,501,520,523)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          532..597
                     /region_name="LIM3_TRIP6"
                     /note="The third LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09436"
                     /db_xref="CDD:188820"
     Site            order(532,535,559,562,565,568,589,592)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188820"
     CDS             1..608
                     /gene="LOC121353799"
                     /coded_by="XM_041467939.1:380..2206"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 mshpswlppk stnepvghvt armetthtfg tpsisvstqq tpkkfapvva pkpkynpykq
       61 pggdgdflpp ppppvddlgn itssqgafpp ppplddvtyn vqvnpggktl eerrcsldae
      121 idsltsilad lessspykpr tqqgsgtsss saattpsvst pvtghkrmii pnqppltatk
      181 kstakgpgqp apipvtpvgt lkpqpvpasy atastpsrpa fnvqvrtaqp sphyqppsqq
      241 pghygslgpg qpyatapsrq pagpqygapq pqgpsygygp ppgrpaepay gyappqgryq
      301 dpyyggyggr ngseapyvpq sswkaepayp asnamgqapp glyqpqgtkk tyitdpvlap
      361 qppalqqksg ysssgpasst pafrpedele hltkkmlydm enppsddyfg rcarcgenvv
      421 gegtgctamd qvfhvecftc imcntklrgq pfyavekkay cepcyintle qcsvcakpim
      481 erilratgka yhphcftcvm chrsldgipf tvdaggnihc iedfhkkfap rcsvckesim
      541 papgqeetvr ivaldrdfhv qcyrcedcgg llsegdnqgc ypldghilck tcnsariqal
      601 takastdl
//
LOCUS       XP_041323874             483 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323874
VERSION     XP_041323874.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467940.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..483
                     /product="lipoma-preferred partner isoform X2"
                     /calculated_mol_wt=51521
     Region          <52..276
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          287..340
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(287,290,309,312,315,318,336,339)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          347..399
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(347,350,367,370,373,376,395,398)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          407..472
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(407,410,434,437,440,443,464,467)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     CDS             1..483
                     /gene="LOC121353799"
                     /coded_by="XM_041467940.1:146..1597"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 mvlnlcsanp ggpwitpkgs gtssssaatt psvstpvtgh krmiipnqpp ltatkkstak
       61 gpgqpapipv tpvgtlkpqp vpasyatast psrpafnvqv rtaqpsphyq ppsqqpghyg
      121 slgpgqpyat apsrqpagpq ygapqpqgps ygygpppgrp aepaygyapp qgryqdpyyg
      181 gyggrngsea pyvpqsswka epaypasnam gqappglyqp qgtkktyitd pvlapqppal
      241 qqksgysssg passtpafrp edelehltkk mlydmenpps ddyfgrcarc genvvgegtg
      301 ctamdqvfhv ecftcimcnt klrgqpfyav ekkaycepcy intleqcsvc akpimerilr
      361 atgkayhphc ftcvmchrsl dgipftvdag gnihciedfh kkfaprcsvc kesimpapgq
      421 eetvrivald rdfhvqcyrc edcggllseg dnqgcypldg hilcktcnsa riqaltakas
      481 tdl
//
LOCUS       XP_041323875             441 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoma-preferred partner isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323875
VERSION     XP_041323875.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467941.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="lipoma-preferred partner isoform X3"
                     /calculated_mol_wt=47399
     Region          <10..234
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          245..298
                     /region_name="LIM1_TRIP6"
                     /note="The first LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09350"
                     /db_xref="CDD:188736"
     Site            order(245,248,267,270,273,276,294,297)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188736"
     Region          305..357
                     /region_name="LIM2_TRIP6"
                     /note="The second LIM domain of Thyroid
                     receptor-interacting protein 6 (TRIP6); cd09356"
                     /db_xref="CDD:188742"
     Site            order(305,308,325,328,331,334,353,356)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188742"
     Region          365..430
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(365,368,392,395,398,401,422,425)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     CDS             1..441
                     /gene="LOC121353799"
                     /coded_by="XM_041467941.1:135..1460"
                     /db_xref="GeneID:121353799"
ORIGIN      
        1 miipnqpplt atkkstakgp gqpapipvtp vgtlkpqpvp asyatastps rpafnvqvrt
       61 aqpsphyqpp sqqpghygsl gpgqpyatap srqpagpqyg apqpqgpsyg ygpppgrpae
      121 paygyappqg ryqdpyyggy ggrngseapy vpqsswkaep aypasnamgq appglyqpqg
      181 tkktyitdpv lapqppalqq ksgysssgpa sstpafrped elehltkkml ydmenppsdd
      241 yfgrcarcge nvvgegtgct amdqvfhvec ftcimcntkl rgqpfyavek kaycepcyin
      301 tleqcsvcak pimerilrat gkayhphcft cvmchrsldg ipftvdaggn ihciedfhkk
      361 faprcsvcke simpapgqee tvrivaldrd fhvqcyrced cggllsegdn qgcypldghi
      421 lcktcnsari qaltakastd l
//
LOCUS       XP_041323876             693 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi integral membrane protein 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323876
VERSION     XP_041323876.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467942.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..693
                     /product="Golgi integral membrane protein 4 isoform X1"
                     /calculated_mol_wt=81500
     Region          <30..>575
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..693
                     /gene="GOLIM4"
                     /coded_by="XM_041467942.1:344..2425"
                     /db_xref="GeneID:121353801"
ORIGIN      
        1 mgngmcsrkq krifqtllll tvvfgflyga mlyyelqgql rkaeatalky qqhqeslsaq
       61 lqvvyehrsr lekslqkerl ehkkakedfl vykleaqetl nkgrqdsnsr ysalsvqhqm
      121 lksqheelkk qhadleedhr kqgeefsrtf sdhkerylql qqekeqeisk lkeslynlre
      181 enrqlrkahq dihtqlqdvk qqhknllsqh nelvvtledh ksalaaaqtq veeykqlkdt
      241 lkkipsfqdv ekeeggkeqq pevrgpsphs ppeppgagae qqqqnekpre reeiksqeqg
      301 raepfhvqer ahegqnakel niqeqqeage deeqraeqme eerkkeleee emeqagqper
      361 leeeqdqape ehewkkqeqk eeetnmlgdh lqsevtptkr qkaayeqqle qqhlgaqrae
      421 eakqlrqqqe slhqqrlrgq llrqqqlqer elqlqrqaeq geklfknrls qqahydnmdq
      481 divqgeeeqg iqeeegayeh dnqhqdeged ddqnnaneqq eaehqaenqq adeskaamed
      541 vnpaddpnnq gedefeeaeq ereenlpeen ekrketgqkq ghpgmeehlv magnpdqqed
      601 nvdeqyqeeg eeevqedlte ekkrelehna eepygeneen adeknnrgtd qeqemqednn
      661 qkaiheenye eeeeeeeeeg ravaaktrrr gem
//
LOCUS       XP_041323877             675 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi integral membrane protein 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323877
VERSION     XP_041323877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467943.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..675
                     /product="Golgi integral membrane protein 4 isoform X2"
                     /calculated_mol_wt=79426
     Region          <30..>320
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <217..521
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..675
                     /gene="GOLIM4"
                     /coded_by="XM_041467943.1:344..2371"
                     /db_xref="GeneID:121353801"
ORIGIN      
        1 mgngmcsrkq krifqtllll tvvfgflyga mlyyelqgql rkaeatalky qqhqeslsaq
       61 lqvvyehrsr lekslqkerl ehkkakedfl vykleaqetl nkgrsqheel kkqhadleed
      121 hrkqgeefsr tfsdhkeryl qlqqekeqei sklkeslynl reenrqlrka hqdihtqlqd
      181 vkqqhknlls qhnelvvtle dhksalaaaq tqveeykqlk dtlkkipsfq dvekeeggke
      241 qqpevrgpsp hsppeppgag aeqqqqnekp rereeiksqe qgraepfhvq erahegqnak
      301 elniqeqqea gedeeqraeq meeerkkele eeemeqagqp erleeeqdqa peehewkkqe
      361 qkeeetnmlg dhlqsevtpt krqkaayeqq leqqhlgaqr aeeakqlrqq qeslhqqrlr
      421 gqllrqqqlq erelqlqrqa eqgeklfknr lsqqahydnm dqdivqgeee qgiqeeegay
      481 ehdnqhqdeg edddqnnane qqeaehqaen qqadeskaam edvnpaddpn nqgedefeea
      541 eqereenlpe enekrketgq kqghpgmeeh lvmagnpdqq ednvdeqyqe egeeevqedl
      601 teekkreleh naeepygene enadeknnrg tdqeqemqed nnqkaiheen yeeeeeeeee
      661 egravaaktr rrgem
//
LOCUS       XP_041323878             665 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi integral membrane protein 4 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323878
VERSION     XP_041323878.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467944.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..665
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..665
                     /product="Golgi integral membrane protein 4 isoform X3"
                     /calculated_mol_wt=78395
     Region          <30..>399
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..665
                     /gene="GOLIM4"
                     /coded_by="XM_041467944.1:344..2341"
                     /db_xref="GeneID:121353801"
ORIGIN      
        1 mgngmcsrkq krifqtllll tvvfgflyga mlyyelqgql rkaeatalky qqhqeslsaq
       61 lqvvyehrsr lekslqkerl ehkkakedfl vykleaqetl nkgrqdsnsr ysalsvqhqm
      121 lksqheelkk qhadleedhr kqgeefsrtf sdhkerylql qqekeqeisk lkeslynlre
      181 enrqlrkahq dihtqlqdvk tqveeykqlk dtlkkipsfq dvekeeggke qqpevrgpsp
      241 hsppeppgag aeqqqqnekp rereeiksqe qgraepfhvq erahegqnak elniqeqqea
      301 gedeeqraeq meeerkkele eeemeqagqp erleeeqdqa peehewkkqe qkeeetnmlg
      361 dhlqsevtpt krqkaayeqq leqqhlgaqr aeeakqlrqq qeslhqqrlr gqllrqqqlq
      421 erelqlqrqa eqgeklfknr lsqqahydnm dqdivqgeee qgiqeeegay ehdnqhqdeg
      481 edddqnnane qqeaehqaen qqadeskaam edvnpaddpn nqgedefeea eqereenlpe
      541 enekrketgq kqghpgmeeh lvmagnpdqq ednvdeqyqe egeeevqedl teekkreleh
      601 naeepygene enadeknnrg tdqeqemqed nnqkaiheen yeeeeeeeee egravaaktr
      661 rrgem
//
LOCUS       XP_041323880             527 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal export protein NMD3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323880
VERSION     XP_041323880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467946.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..527
                     /product="60S ribosomal export protein NMD3"
                     /calculated_mol_wt=60404
     Region          17..246
                     /region_name="NMD3"
                     /note="NMD3 family; pfam04981"
                     /db_xref="CDD:461505"
     CDS             1..527
                     /gene="NMD3"
                     /coded_by="XM_041467946.1:19..1602"
                     /db_xref="GeneID:121353802"
ORIGIN      
        1 meylpapaap aqghilccqc gvpippnpan mcvgclraqv ditegipkqg tvhfckqcer
       61 ylqppgtwiq calesrella lclkkikasl skvrlidagf iwtephskrl klkltvqkev
      121 ingavlqqvf vveyivqsqm cedchrieak dfwkavvqvr qktvhkktfy yleqlilkhr
      181 lhqntlrike ihdgldfyys skqhaqkmvd flqctvpsrs kssqrlishd ihsnvynyks
      241 tfsveivpic kdnvvclspk laqslgnmsq icvcirvtst ihlidprtlq iaeidgntyw
      301 rhpfnslfhp kqleefiimd isrvnerkkg agagarsnkh tlaeawvrkt seldtdhqyf
      361 ccthlghiln pgdlvlgfdl ancnlndefa nkmnpqhipd vvlikksydr srrqrrrnwk
      421 lkelerdrea sdtdderqyq dfledleede nirknvniyr nadipvesdt dddgaprisl
      481 aemledlhis qdatggegae mlteklpcka ldqkdwkilw svmsiel
//
LOCUS       XP_041323881             150 aa            linear   VRT 06-MAY-2021
DEFINITION  retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase
            subunit delta [Pyrgilauda ruficollis].
ACCESSION   XP_041323881
VERSION     XP_041323881.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467947.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..150
                     /product="retinal rod rhodopsin-sensitive cGMP
                     3',5'-cyclic phosphodiesterase subunit delta"
                     /calculated_mol_wt=17247
     Region          10..149
                     /region_name="GMP_PDE_delta"
                     /note="GMP-PDE, delta subunit; pfam05351"
                     /db_xref="CDD:428436"
     CDS             1..150
                     /gene="PDE6D"
                     /coded_by="XM_041467947.1:126..578"
                     /db_xref="GeneID:121353803"
ORIGIN      
        1 msatderake ilrgfklnwm nlrdaetgki lwqgtedlsv pgvehearvp kkilkckavs
       61 relnfssaeq mekfrleqkv yfkgqcleew ffefgfvipn stntwqslie aapesqmmpa
      121 nvltgnviie tkfydddllv stsrvrlfyv
//
LOCUS       XP_041323882            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323882
VERSION     XP_041323882.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467948.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="phospholipid-transporting ATPase IF isoform X1"
                     /calculated_mol_wt=130850
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1150
                     /gene="ATP11B"
                     /coded_by="XM_041467948.1:215..3667"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqlte
     1081 agsginclds mccfsdgeta ctsvrrmler lmgrcspsrv nrclsavklq venvsvhyip
     1141 pasaqgmkkh
//
LOCUS       XP_041323883            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323883
VERSION     XP_041323883.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467949.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="phospholipid-transporting ATPase IF isoform X1"
                     /calculated_mol_wt=130850
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1150
                     /gene="ATP11B"
                     /coded_by="XM_041467949.1:215..3667"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqlte
     1081 agsginclds mccfsdgeta ctsvrrmler lmgrcspsrv nrclsavklq venvsvhyip
     1141 pasaqgmkkh
//
LOCUS       XP_041323884            1149 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323884
VERSION     XP_041323884.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467950.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1149
                     /product="phospholipid-transporting ATPase IF isoform X2"
                     /calculated_mol_wt=130815
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1149
                     /gene="ATP11B"
                     /coded_by="XM_041467950.1:215..3664"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqlte
     1081 agsginclds mccfsdgeta ctsvrrmler lmgrcspsrv nrcgislnsl ccrrfsykle
     1141 pdepaaidv
//
LOCUS       XP_041323885            1148 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323885
VERSION     XP_041323885.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467951.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1148
                     /product="phospholipid-transporting ATPase IF isoform X3"
                     /calculated_mol_wt=130670
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1148
                     /gene="ATP11B"
                     /coded_by="XM_041467951.1:215..3661"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqlte
     1081 agsginclds mccfsdgeta ctsvrrmler lmgrcspsrv nrswsssdpf yandrsiltl
     1141 stmdsatc
//
LOCUS       XP_041323886            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323886
VERSION     XP_041323886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="phospholipid-transporting ATPase IF isoform X4"
                     /calculated_mol_wt=129960
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1139
                     /gene="ATP11B"
                     /coded_by="XM_041467952.1:215..3634"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqmys
     1081 nrvalsdefi alqplsrarn qlskisllrq vqvstawtpc aasqmgkqha hlleecwnd
//
LOCUS       XP_041323887            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323887
VERSION     XP_041323887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="phospholipid-transporting ATPase IF isoform X4"
                     /calculated_mol_wt=129960
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1139
                     /gene="ATP11B"
                     /coded_by="XM_041467953.1:215..3634"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqmys
     1081 nrvalsdefi alqplsrarn qlskisllrq vqvstawtpc aasqmgkqha hlleecwnd
//
LOCUS       XP_041323888            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323888
VERSION     XP_041323888.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467954.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="phospholipid-transporting ATPase IF isoform X4"
                     /calculated_mol_wt=129960
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1139
                     /gene="ATP11B"
                     /coded_by="XM_041467954.1:215..3634"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqmys
     1081 nrvalsdefi alqplsrarn qlskisllrq vqvstawtpc aasqmgkqha hlleecwnd
//
LOCUS       XP_041323889            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323889
VERSION     XP_041323889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="phospholipid-transporting ATPase IF isoform X4"
                     /calculated_mol_wt=129960
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1139
                     /gene="ATP11B"
                     /coded_by="XM_041467955.1:215..3634"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqmys
     1081 nrvalsdefi alqplsrarn qlskisllrq vqvstawtpc aasqmgkqha hlleecwnd
//
LOCUS       XP_041323890            1132 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323890
VERSION     XP_041323890.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467956.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1132
                     /product="phospholipid-transporting ATPase IF isoform X5"
                     /calculated_mol_wt=128869
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1132
                     /gene="ATP11B"
                     /coded_by="XM_041467956.1:215..3613"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqlte
     1081 agsginclds mccfsdgeta ctsvrrmler lmgrcspsrv nsvckvteet ci
//
LOCUS       XP_041323891            1132 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323891
VERSION     XP_041323891.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467957.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1132
                     /product="phospholipid-transporting ATPase IF isoform X5"
                     /calculated_mol_wt=128869
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1132
                     /gene="ATP11B"
                     /coded_by="XM_041467957.1:215..3613"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqlte
     1081 agsginclds mccfsdgeta ctsvrrmler lmgrcspsrv nsvckvteet ci
//
LOCUS       XP_041323892            1117 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase IF isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323892
VERSION     XP_041323892.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467958.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1117
                     /product="phospholipid-transporting ATPase IF isoform X6"
                     /calculated_mol_wt=127592
     Region          41..950
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(407..409,543,566..568,630,677..679,765,768,771,792,
                     795)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1117
                     /gene="ATP11B"
                     /coded_by="XM_041467958.1:215..3568"
                     /db_xref="GeneID:121353804"
ORIGIN      
        1 mlrwvrqqlg fdpphqsdtr tiyianrfpq hghyvpqkfa dnriisskyt vwnfvpknlf
       61 eqfrrvanfy fliiflvqlm idtptspits glplffvitv taikqgyedw lrhkadnevn
      121 gapvyvvrsg glvktrskni rvgdivrvak detfpvdlvl lssdrvdgsc hvttasldge
      181 tnlkthvavp etavlqsvan ldklvaviec qqpeadlyrf vgritvsqqa eeivrplgpe
      241 slllrgarlk ntkeifgvav ytgmetkmal nyksksqkrs aveksmnsfl iiyliillfe
      301 ailstilkya wqaeekwdep wynekteher nsskilrfis dflaflvlyn fiipislyvt
      361 vemqkflgsf figwdldlyh eetnqraqvn tsdlneelgq veyvftdktg tltenemqfr
      421 ecsingikyq evngkltpeg fsedspdgnr hglvkeeelf lkavclchtv qinadqtdga
      481 dgpwhangit spleyyassp dekalveaas rvgvvftgis gdsmevkslg kperykllhv
      541 lefdpnrrrm svivespsge kllftkgaes silprsksge idktrihvde falkglrtlc
      601 vayrrftpee yqeigkrlhe artalqqree rladvfnfie rdlellgatg vedklqekvq
      661 etiealrlag ikvwvltgdk hetavsvsls cghfhrtmni lelvqhksds tcaeqlrqla
      721 krikedhviq hglvvdgtsl slalrehekl fmevckncsa vlccrmaplq kakvvrllkt
      781 spekpitlai gdgandvsmi qeahvgigim gkegrqavrn sdyaiarfkf lskllfvhgh
      841 fyyiriatlv qyffyknvcf itpqflyqff clfsqqtlyd svyltlynic ftslpvliys
      901 lfeqhvhphv lqskpvlyrd isknahlgfk pflywtilgf fhafvffygs yllmgedtsl
      961 lgngqmfgnw tfgtlvftvm vitvtmkmal ethfwtwinh fvtwgsivfy fifslfyggi
     1021 iwpflhtqdm yfvfvqllss gsawfaiili vvaclfidvv kkvlyrhlqp sstekaqmys
     1081 nrvalsdefi alqplsrarn qlskirlhsv qkcshly
//
LOCUS       XP_041323894             259 aa            linear   VRT 06-MAY-2021
DEFINITION  DCN1-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323894
VERSION     XP_041323894.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467960.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="DCN1-like protein 1"
                     /calculated_mol_wt=29978
     Region          1..51
                     /region_name="UBA_like_SF"
                     /note="UBA domain-like superfamily; cl21463"
                     /db_xref="CDD:473871"
     Region          136..246
                     /region_name="Cullin_binding"
                     /note="Cullin binding; pfam03556"
                     /db_xref="CDD:460971"
     CDS             1..259
                     /gene="DCUN1D1"
                     /coded_by="XM_041467960.1:141..920"
                     /db_xref="GeneID:121353806"
ORIGIN      
        1 mnklkssqkd kvrqfmvftq ssektavscl sqndwkldva tdnffqnpel yiresvkgsl
       61 drkkleqlyn rykdpqdenk igidgiqqfc ddlaldpasi tvliiawkfr aatqcefskl
      121 efmdgmtelg cdsieklkaq ipkmeqelke pgrfkdfyqf tfnfaknpgq kgldlemaia
      181 ywnlvlngrf kfldlwnkfl lehhkrsipk dtwnllldfs tmiaddmsny deegawpvli
      241 ddfvefarpq iagtksttv
//
LOCUS       XP_041323895             211 aa            linear   VRT 06-MAY-2021
DEFINITION  claudin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323895
VERSION     XP_041323895.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467961.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..211
                     /product="claudin-1"
                     /calculated_mol_wt=22649
     Region          5..182
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..211
                     /gene="CLDN1"
                     /coded_by="XM_041467961.1:73..708"
                     /db_xref="GeneID:121353808"
ORIGIN      
        1 masgglqllg fvmaflgwig iiistampqw kmasyagdni vtaqalyegl wmscamqstg
       61 qiqckvydsl lklegslqat ralmvasill glvgmfvavt gmkcmkcmed dqvkkmrmav
      121 fggvifiisg laalvatswy gnrvarafyd pftpvntrfe fgsalfigwa asslailggs
      181 flccscprre tsypptrgyp knasstgkdy v
//
LOCUS       XP_041323896             677 aa            linear   VRT 06-MAY-2021
DEFINITION  fragile X mental retardation syndrome-related protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323896
VERSION     XP_041323896.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467962.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..677
                     /product="fragile X mental retardation syndrome-related
                     protein 1 isoform X1"
                     /calculated_mol_wt=76038
     Region          3..57
                     /region_name="Tudor_Agenet_FXR1_rpt1"
                     /note="first Tudor-like Agenet domain found in fragile X
                     mental retardation syndrome-related protein 1 (FXR1) and
                     similar proteins; cd20472"
                     /db_xref="CDD:410543"
     Site            order(10,14,16,32,36,38)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410543"
     Region          61..126
                     /region_name="Tudor_Agenet_FXR1_rpt2"
                     /note="second Tudor-like Agenet domain found in fragile X
                     mental retardation syndrome-related protein 1 (FXR1) and
                     similar proteins; cd20475"
                     /db_xref="CDD:410546"
     Site            order(69,78,80,96,101,103)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410546"
     Region          123..199
                     /region_name="KH_I_FXR1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in fragile X mental retardation syndrome-related
                     protein 1 (FXR1) and similar proteins; cd22504"
                     /db_xref="CDD:411932"
     Region          218..280
                     /region_name="KH_I_FXR1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in fragile X mental retardation syndrome-related
                     protein 1 (FXR1) and similar proteins; cd22507"
                     /db_xref="CDD:411935"
     Site            order(228,230..232,234..238,241..242,245..246,252..255)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411935"
     Region          281..358
                     /region_name="KH_I_FXR1_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in fragile X mental retardation syndrome-related
                     protein 1 (FXR1) and similar proteins; cd22510"
                     /db_xref="CDD:411938"
     Site            order(291,293..295,297..301,304..305,308..309,315..318)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411938"
     Region          354..466
                     /region_name="FXMRP1_C_core"
                     /note="Fragile X-related 1 protein core C terminal;
                     pfam12235"
                     /db_xref="CDD:463501"
     Region          491..564
                     /region_name="FXR_C1"
                     /note="Fragile X-related 1 protein C-terminal region 2;
                     pfam16096"
                     /db_xref="CDD:465019"
     Region          610..676
                     /region_name="FXR_C3"
                     /note="Fragile X-related 1 protein C-terminal region 3;
                     pfam16097"
                     /db_xref="CDD:435134"
     CDS             1..677
                     /gene="FXR1"
                     /coded_by="XM_041467962.1:151..2184"
                     /db_xref="GeneID:121353809"
ORIGIN      
        1 meeltvevrg sngafykgfi kdvhedsltv afennwqper qvpfnevrlp pppdikkeig
       61 egdevevysr andqepcgww lakvrmmkge fyvieyaacd atyneivtye rlrpvnqnkt
      121 vkkntffkct vdvpedlrda canenahkdf kkavgacrif yhaetaqlii lsaseatvkr
      181 vnilsdmhlr sirtklmlms rneeatkhle ctkqlaaafh eefvvredlm glaigthgsn
      241 iqqarkvpgv ttieleedtg tfriygetad avkkarsyle fvedfiqvpr nlvgkvigkn
      301 gkviqeivdk sgvvrvrieg dnenklpred gmvpfvfvgt kesignvqvl leyhiaylke
      361 veqlrlerlq ideqlrqigm gfrpssarvp ekekgyttde stlssvqgsr sysgrgrgrr
      421 gpnytsgygt nselsnpset eserkdelsd wslageddre srhqrdnrrr pggrgrsvsg
      481 grgrggprgg kssissvlkd pdsnpyslld ntesdqtvdt daseshhssn rrrrsrrrrt
      541 dedavlmdgm tesdtasvne nglddsdkkp qrrnrsrrrr frgqaedrqp vtvadyisra
      601 esqsrqrnpp ketvaktkke takdaidens psekavngpa ttsgdepskl qhspdekkvt
      661 vqedgnnqee avlngvs
//
LOCUS       XP_041323897             650 aa            linear   VRT 06-MAY-2021
DEFINITION  fragile X mental retardation syndrome-related protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323897
VERSION     XP_041323897.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467963.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..650
                     /product="fragile X mental retardation syndrome-related
                     protein 1 isoform X2"
                     /calculated_mol_wt=72644
     Region          3..57
                     /region_name="Tudor_Agenet_FXR1_rpt1"
                     /note="first Tudor-like Agenet domain found in fragile X
                     mental retardation syndrome-related protein 1 (FXR1) and
                     similar proteins; cd20472"
                     /db_xref="CDD:410543"
     Site            order(10,14,16,32,36,38)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410543"
     Region          61..126
                     /region_name="Tudor_Agenet_FXR1_rpt2"
                     /note="second Tudor-like Agenet domain found in fragile X
                     mental retardation syndrome-related protein 1 (FXR1) and
                     similar proteins; cd20475"
                     /db_xref="CDD:410546"
     Site            order(69,78,80,96,101,103)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410546"
     Region          123..199
                     /region_name="KH_I_FXR1_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in fragile X mental retardation syndrome-related
                     protein 1 (FXR1) and similar proteins; cd22504"
                     /db_xref="CDD:411932"
     Region          218..280
                     /region_name="KH_I_FXR1_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in fragile X mental retardation syndrome-related
                     protein 1 (FXR1) and similar proteins; cd22507"
                     /db_xref="CDD:411935"
     Site            order(228,230..232,234..238,241..242,245..246,252..255)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411935"
     Region          281..358
                     /region_name="KH_I_FXR1_rpt3"
                     /note="third type I K homology (KH) RNA-binding domain
                     found in fragile X mental retardation syndrome-related
                     protein 1 (FXR1) and similar proteins; cd22510"
                     /db_xref="CDD:411938"
     Site            order(291,293..295,297..301,304..305,308..309,315..318)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411938"
     Region          354..466
                     /region_name="FXMRP1_C_core"
                     /note="Fragile X-related 1 protein core C terminal;
                     pfam12235"
                     /db_xref="CDD:463501"
     Region          491..564
                     /region_name="FXR_C1"
                     /note="Fragile X-related 1 protein C-terminal region 2;
                     pfam16096"
                     /db_xref="CDD:465019"
     Region          583..649
                     /region_name="FXR_C3"
                     /note="Fragile X-related 1 protein C-terminal region 3;
                     pfam16097"
                     /db_xref="CDD:435134"
     CDS             1..650
                     /gene="FXR1"
                     /coded_by="XM_041467963.1:151..2103"
                     /db_xref="GeneID:121353809"
ORIGIN      
        1 meeltvevrg sngafykgfi kdvhedsltv afennwqper qvpfnevrlp pppdikkeig
       61 egdevevysr andqepcgww lakvrmmkge fyvieyaacd atyneivtye rlrpvnqnkt
      121 vkkntffkct vdvpedlrda canenahkdf kkavgacrif yhaetaqlii lsaseatvkr
      181 vnilsdmhlr sirtklmlms rneeatkhle ctkqlaaafh eefvvredlm glaigthgsn
      241 iqqarkvpgv ttieleedtg tfriygetad avkkarsyle fvedfiqvpr nlvgkvigkn
      301 gkviqeivdk sgvvrvrieg dnenklpred gmvpfvfvgt kesignvqvl leyhiaylke
      361 veqlrlerlq ideqlrqigm gfrpssarvp ekekgyttde stlssvqgsr sysgrgrgrr
      421 gpnytsgygt nselsnpset eserkdelsd wslageddre srhqrdnrrr pggrgrsvsg
      481 grgrggprgg kssissvlkd pdsnpyslld ntesdqtvdt daseshhssn rrrrsrrrrt
      541 dedavlmdgm tesdtasvne nglvtvadyi sraesqsrqr nppketvakt kketakdaid
      601 enspsekavn gpattsgdep sklqhspdek kvtvqedgnn qeeavlngvs
//
LOCUS       XP_041323898             116 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import inner membrane translocase subunit TIM14
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323898
VERSION     XP_041323898.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467964.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..116
                     /product="mitochondrial import inner membrane translocase
                     subunit TIM14"
                     /calculated_mol_wt=12418
     Region          8..110
                     /region_name="DnaJ"
                     /note="DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock
                     protein 40) proteins are highly conserved and play crucial
                     roles in protein translation, folding, unfolding,
                     translocation, and degradation. They act primarily by
                     stimulating the ATPase activity of Hsp70s; cl02542"
                     /db_xref="CDD:413365"
     CDS             1..116
                     /gene="DNAJC19"
                     /coded_by="XM_041467964.1:115..465"
                     /db_xref="GeneID:121353810"
ORIGIN      
        1 mastmvavgl aiaaagfagr yavkalkqme pqvkqalhnl pksafsggyy rggfepkmtk
       61 reaalilgvs ptanrnkire ahrrimllnh pdkggspyva akineakdll edqakk
//
LOCUS       XP_041323899             429 aa            linear   VRT 06-MAY-2021
DEFINITION  neuromedin-U receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323899
VERSION     XP_041323899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..429
                     /product="neuromedin-U receptor 1"
                     /calculated_mol_wt=48518
     Region          64..366
                     /region_name="7tmA_NMU-R1"
                     /note="neuromedin U receptor subtype 1, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15358"
                     /db_xref="CDD:320480"
     Region          64..91
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320480"
     Region          98..124
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320480"
     Site            order(124,141,203,221..224,315..316,319..320,333,337)
                     /site_type="other"
                     /note="putative peptide ligand binding site [polypeptide
                     binding]"
                     /db_xref="CDD:320480"
     Region          137..167
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320480"
     Region          179..201
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320480"
     Region          231..260
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320480"
     Region          289..319
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320480"
     Region          334..359
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320480"
     CDS             1..429
                     /gene="NMUR1"
                     /coded_by="XM_041467965.1:91..1380"
                     /db_xref="GeneID:121353811"
ORIGIN      
        1 mnpyvncsss efplprqdfp vepispdlsn rthpetffdp kdanlteeql rdkylgprrs
       61 nffvpvcviy lliflvgavg ntltcivilr hrfmrtptny ylfslavsdl lvlllgmple
      121 lydmwsnypf llgasgcyfk tllfeavcfa silnvtalsv eryiavvhpl kakyvvtrnh
      181 akrvivtiwv lsvvcsipnt slhglqplyv pgrgrvpdse ictlvkprlt ynliiqvtti
      241 lffflpmgti svlylliglq lkkekmleal gaktgsshnc hnpqgqkkvr rrqvtkmlfv
      301 lvvvfgicwa pfhtdrlvws fvstwtsnml hmfqyvhiis gvffylssaa npilynlmst
      361 rfremfkevm crpgrppwar kpspsvtrat trstecepap galplsdaee yelegtergq
      421 atthavslc
//
LOCUS       XP_041323901             111 aa            linear   VRT 06-MAY-2021
DEFINITION  prothymosin alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323901
VERSION     XP_041323901.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467967.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..111
                     /product="prothymosin alpha isoform X1"
                     /calculated_mol_wt=11966
     Region          2..110
                     /region_name="Prothymosin"
                     /note="Prothymosin/parathymosin family; pfam03247"
                     /db_xref="CDD:460859"
     CDS             1..111
                     /gene="PTMA"
                     /coded_by="XM_041467967.1:356..691"
                     /db_xref="GeneID:121353812"
ORIGIN      
        1 msdaavdtsa eisakdlkek kevveeteng rdapangnae neengeqead nevdeeeeeg
       61 geeedeeeeg dgeeedgddd deaegatgkr aaeddedddv dpkkqktded d
//
LOCUS       XP_041323902             110 aa            linear   VRT 06-MAY-2021
DEFINITION  prothymosin alpha isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323902
VERSION     XP_041323902.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467968.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..110
                     /product="prothymosin alpha isoform X2"
                     /calculated_mol_wt=11837
     Region          2..109
                     /region_name="Prothymosin"
                     /note="Prothymosin/parathymosin family; pfam03247"
                     /db_xref="CDD:460859"
     CDS             1..110
                     /gene="PTMA"
                     /coded_by="XM_041467968.1:350..682"
                     /db_xref="GeneID:121353812"
ORIGIN      
        1 msdaavdtsa eisakdlkek kevveeteng rdapangnan eengeqeadn evdeeeeegg
       61 eeedeeeegd geeedgdddd eaegatgkra aeddedddvd pkkqktdedd
//
LOCUS       XP_041323903             109 aa            linear   VRT 06-MAY-2021
DEFINITION  prothymosin alpha isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323903
VERSION     XP_041323903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="prothymosin alpha isoform X3"
                     /calculated_mol_wt=11794
     Region          2..108
                     /region_name="Prothymosin"
                     /note="Prothymosin/parathymosin family; pfam03247"
                     /db_xref="CDD:460859"
     CDS             1..109
                     /gene="PTMA"
                     /coded_by="XM_041467969.1:359..688"
                     /db_xref="GeneID:121353812"
ORIGIN      
        1 msdaavdtsa eisakdlkek kevveeteng rdapangnae neengeqead nevdeeeeeg
       61 geeedeeeeg eeedgdddde aegatgkraa eddedddvdp kkqktdedd
//
LOCUS       XP_041323904             108 aa            linear   VRT 06-MAY-2021
DEFINITION  prothymosin alpha isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323904
VERSION     XP_041323904.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467970.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..108
                     /product="prothymosin alpha isoform X4"
                     /calculated_mol_wt=11664
     Region          2..107
                     /region_name="Prothymosin"
                     /note="Prothymosin/parathymosin family; pfam03247"
                     /db_xref="CDD:460859"
     CDS             1..108
                     /gene="PTMA"
                     /coded_by="XM_041467970.1:351..677"
                     /db_xref="GeneID:121353812"
ORIGIN      
        1 msdaavdtsa eisakdlkek kevveeteng rdapangnan eengeqeadn evdeeeeegg
       61 eeedeeeege eedgddddea egatgkraae ddedddvdpk kqktdedd
//
LOCUS       XP_041323906             203 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 4 L6 family member 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323906
VERSION     XP_041323906.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467972.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..203
                     /product="transmembrane 4 L6 family member 1"
                     /calculated_mol_wt=22005
     Region          1..195
                     /region_name="L6_membrane"
                     /note="L6 membrane protein; pfam05805"
                     /db_xref="CDD:461745"
     CDS             1..203
                     /gene="TM4SF1"
                     /coded_by="XM_041467972.1:61..672"
                     /db_xref="GeneID:121353813"
ORIGIN      
        1 mcfgrcarcv gykllilall civantllyf pngetrfase hhlskyvecl hgilgggflv
       61 lipaavfigl hnddccgcfg hegcgkscam lssvlaafvg ilgsgyciii salglsqgpy
      121 cltrlernwi ypftdssggy lfeynkwsec qepqnivqwn vtlfsillvl ggiefilcfi
      181 qiingilggl cglccsheet yvc
//
LOCUS       XP_041323907             237 aa            linear   VRT 06-MAY-2021
DEFINITION  claudin-16 [Pyrgilauda ruficollis].
ACCESSION   XP_041323907
VERSION     XP_041323907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467973.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="claudin-16"
                     /calculated_mol_wt=26390
     Region          20..183
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..237
                     /gene="CLDN16"
                     /coded_by="XM_041467973.1:4..717"
                     /db_xref="GeneID:121353814"
ORIGIN      
        1 mkfflqyvgf ffaffsaafl iistwtdcwm vnaddslevs tkcrglwwec vtnvfdgiqt
       61 cdeydsiyae hsvklvltra mmitadllsg fgflflvlgl dcvkflpdep liklriclvs
      121 gimlllaglp gitgsvwyav dvyverssll fhnvflgiqy kfgwscwlgm agslgcflsg
      181 slltccmylf retssgrfhs ayslrkgyss aasvvtnmhl pssqtatskm yavdtrv
//
LOCUS       XP_041323908             191 aa            linear   VRT 06-MAY-2021
DEFINITION  thioredoxin reductase-like selenoprotein T, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323908
VERSION     XP_041323908.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467974.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..191
                     /product="thioredoxin reductase-like selenoprotein T"
     Region          37..175
                     /region_name="CXXU_selWTH"
                     /note="selT/selW/selH selenoprotein domain; TIGR02174"
                     /db_xref="CDD:274013"
     CDS             1..191
                     /gene="SELENOT"
                     /coded_by="XM_041467974.1:<1..576"
                     /db_xref="GeneID:121353815"
ORIGIN      
        1 llaglaaapg gggaaaaeqg glpakklrma yatgpllkfq icvsugyrrv feeymrvisq
       61 rypdiriege nylpqpiyrh iasflsvfkl vligliivgk dpfaffgmqa psiwqwgqen
      121 kvyacmmvff lsnmienqcm stgafeitln dvpvwskles ghlpsmqqlv qildnemkln
      181 vhmesmphhr s
//
LOCUS       XP_041323909             556 aa            linear   VRT 06-MAY-2021
DEFINITION  glutamate-rich protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041323909
VERSION     XP_041323909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="glutamate-rich protein 6"
                     /calculated_mol_wt=61728
     Region          316..516
                     /region_name="FAM194"
                     /note="FAM194 protein; pfam14977"
                     /db_xref="CDD:464417"
     CDS             1..556
                     /gene="ERICH6"
                     /coded_by="XM_041467975.1:8..1678"
                     /db_xref="GeneID:121353816"
ORIGIN      
        1 mdglglaaap gggaddgaqh eageprslpp pekgtnhpaq ppcgtppasp qptptglptl
       61 layrpessqa nvhheaeeda eptceycgsl lrpfpfpedg alpedqagrf ccqgsrelye
      121 filkerkrle dasslpravs tqespgsean mllskeqsgr qqkrhlarel adqslrqsat
      181 kesqqagpls yepsqelpsp kagspvpvas aaepeylsep elrpkekptp eswpeeqpel
      241 epqpkeepel eprpeepepe lqpeeepele kepgsepesq peeepqpekk lkrdkkpmsr
      301 svlgydfsll gkkvgkgklv qkyykngkkf ltmlpdgtlq lfypsgnlai iitqardqlm
      361 civqederrt lkiralfqsd grstcyyptg dewinmsiqg gqyldqagnr vrrwmwpnls
      421 pgpqvplspi fislnrhvgv rilaqdkifi sflamgrqak lnmgtkvqvs tssqlpppap
      481 lgedelllla frvrilqlfe rmrgclnfps neqwnkmqpp mylitqalki lelcmaadis
      541 delrssikai vnaqel
//
LOCUS       XP_041323911             469 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: inactive ubiquitin carboxyl-terminal hydrolase
            MINDY-4B [Pyrgilauda ruficollis].
ACCESSION   XP_041323911
VERSION     XP_041323911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467977.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 15% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..469
                     /product="LOW QUALITY PROTEIN: inactive ubiquitin
                     carboxyl-terminal hydrolase MINDY-4B"
                     /calculated_mol_wt=50467
     Region          93..464
                     /region_name="MINDY-3_4_CD"
                     /note="Deubiquitinating enzyme MINDY-3/4, conserved
                     domain; pfam13898"
                     /db_xref="CDD:464029"
     CDS             1..469
                     /gene="MINDY4B"
                     /coded_by="XM_041467977.1:1..1410"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121353817"
ORIGIN      
        1 mgepgaghae pasleeiasr isdlskwrei fsfrgleins tthqqgrsga gqgppgagec
       61 pgpqppstvp qplllppgtg grpispdtam rlqellfrnt apvfscewaa ahfrfhqphs
      121 dlayalqagk ggtrailaav qahvityllf tretecthle rlcrvgrweq gqalatalae
      181 tlwaaggggr avvclvtapi ttmpregyra nsfterirlf efsekaavqg fisdhincfk
      241 gegshgvilf lysllfsrtl ervqedlgdt apllnissgn vtcteavlsl lltgrasaaa
      301 rrrpgagarr wargwrgava agprglpalg agaagaager gdspgqrdpr hgpgswqasp
      361 aqvspglrtp rlpvwlcsls grhsvlfgtd srllsdwkse rlfhlyfysg qqeqtqtahl
      421 tidthshhwe eaqregpcsp gkrrpalema irtkwagatv swngtdpff
//
LOCUS       XP_041323912             343 aa            linear   VRT 06-MAY-2021
DEFINITION  G-protein coupled receptor 87 [Pyrgilauda ruficollis].
ACCESSION   XP_041323912
VERSION     XP_041323912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467978.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="G-protein coupled receptor 87"
                     /calculated_mol_wt=39515
     Region          28..310
                     /region_name="7tmA_GPR87"
                     /note="G protein-coupled receptor 87, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15969"
                     /db_xref="CDD:320635"
     Region          28..55
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320635"
     Region          61..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320635"
     Site            order(95,99,103..104,107..108,111,154,157..158,161,165,
                     176..177,181,189,192..193,196,257,260,264,281)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320635"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320635"
     Region          141..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320635"
     Region          188..217
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320635"
     Region          230..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320635"
     Region          278..303
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320635"
     CDS             1..343
                     /gene="GPR87"
                     /coded_by="XM_041467978.1:1..1032"
                     /db_xref="GeneID:121353818"
ORIGIN      
        1 mvtdaglgpe ngsspngssp gqdefttivl pvlylvifla slllnglavw iffhirnkts
       61 fifylknivv adllmtltfp fkiiqdsrlg pwhfnsflcr yttvlfyanm yttivflgli
      121 sidrylkvvk pfgdsrmysi tftkvlsacv wvvmaflalp nliltngypt rrnvddclkl
      181 ksplgvkwhs avvyintcmf vvvlvvligc yiaisryiyk sskqfissss rkrkhnqsir
      241 vvvavfftcf lpyhlcripf tfshldkild dsahrilyyc kemtlflsac nvcldpiiyf
      301 fmcrsfsrrl frksnmrtrs esirslqsvr rsevriyhey tdv
//
LOCUS       XP_041323913            2067 aa            linear   VRT 06-MAY-2021
DEFINITION  immunoglobulin superfamily member 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041323913
VERSION     XP_041323913.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467979.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2067
                     /product="immunoglobulin superfamily member 10"
                     /calculated_mol_wt=223586
     Region          40..61
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <60..>219
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          62..82
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          83..106
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          107..130
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          131..154
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          155..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          192..>344
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          483..554
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          492..496
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          505..510
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          533..537
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          547..552
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          583..648
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1103..1184
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1113..1117
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1126..1130
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1150..1154
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1164..1169
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1177..1180
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1199..1281
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          1207..1211
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1220..1224
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1247..1251
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1261..1266
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1274..1277
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1285..1364
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1385..1464
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1494..1580
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1513..1517
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1546..1550
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1560..1565
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1573..1576
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1585..1661
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1693..1774
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          1714..1718
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1740..1744
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1754..1759
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1789..1872
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          1799..1803
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1812..1816
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1838..1842
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1852..1857
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1875..1954
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1972..2053
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     CDS             1..2067
                     /gene="IGSF10"
                     /coded_by="XM_041467979.1:1..6204"
                     /db_xref="GeneID:121353819"
ORIGIN      
        1 mgaprrerpr wlgtllaacl atlpgisacp rpcachgsae lhctfryfta vpprippgaq
       61 rinlgynslr klsptdfagl eklellmlhs neistipekv fsdlrslqvl kmsynkvrvl
      121 qqdvfyglns lvrlhmdhnq iefvnpnvfy gltslrlvhl dgnllqqlhp dtfvtlrysq
      181 ifrisflkhi slsdnaltsl pqemfsymse lesiylhgnp wscdcslqgf agwarerpdv
      241 ikcrkerssg vqqcpicasp rshngkslvd ipsasftctk pvihdslksr nltvpddgdf
      301 sfvspedlia pigsvvlnmt dqagnrgnlv cdvqrpkets pisldkngps rvlkasfsal
      361 lvcgvdyghi qqlwgilaly sssplklqqt vqtaeepfvs ykykqiyseq delftsieae
      421 lraepawlmq stvalqldrt attlstlhvh yaaearvtlp sedhdqgrhd waiisrdnst
      481 qtehtvlvgg svelgcraag qpapavewvl adgskvraph isedgriivl ksgvltlrta
      541 dvfdsglyhc istnhkdaev ltfritvlda qvqhggvnga rlsaalgstl hlpctstaap
      601 daavtwvlpe htilhqsagn khifangtlr vqgvtqrdvg yfrcvaanry gadllvfqvl
      661 lrqdetalkk khgalgewee gsgnellrsa aaqshpsgia atlraggesa apgsarrrss
      721 hgktphhadr tgrrfrghrr qfvssgrrad pqrwaallek tkrnstvtgk rgeaateppi
      781 qvqklsevpe deeetsgdlv speeefmipa terspvsalg rqiqviqdip thppqlqqhy
      841 grrrkisgwr rivrpgyipg vkehrynfgr pgsargstav atgvhlnmny vpnvptlnnl
      901 sisinplspe tpqsspstme mplehpvaqa hsshtdsskp ghleehpvsn apawqcdcse
      961 sprgtpnhtr laeehpagrv tscqscpeph hgspnlsvag rapwchecpt cctptaappr
     1021 aswpprghgq pqpgppprgt ergnalqapg iaspwggdkd spatarserr rnqgtstlps
     1081 pstfgsvsts rfskprivgg nlasftllan sdafipceat gnppptiqwt kissgrgaag
     1141 rgrwsvlpng tlaiaragpq dgghyvctaa nahgsarlqv slavlahppr iaggrgrllt
     1201 ahsggsaalp crargspppr iswllangte lrhgaagggr asvepdgtll lreltvydrg
     1261 lytcrasspa gtdtlplrlq vvaappsile ekrqsvagaa gqslslpcta qgkpepavrw
     1321 vlpsgaalrp lqllhgrlll langtlllgs aapsdsgtye ciatsstgsd rrvvslavqr
     1381 tetlpkiaia sqeltrlnfg erlllnctas gepkpriiwr lpskavvdqw hrmgsrihvy
     1441 pngslaieav tekdagdylc varnrigddl ilmkvsitmk pakidhkqqf kklvpygkdf
     1501 rvdckasgsp rpeiswglpd gtvvnnamla ddsgrrarry vlfdngtlhl nkagvaeggd
     1561 ytcyaqntlg rdemkihvtv ivaapqikhn ykthvrvtag dtalldceaa gepraqifwl
     1621 lpssemisss tdrhslhang slsvsqasll dageylcvar npggddskly kldvaakppi
     1681 inglyrnkti mkvtavrhsk khidcraegi pppqimwimp dnifltapyy gsrivvhkng
     1741 tleirnirps dtadficvar ndggetvlvv qlevtemlrr pmfknpfnek iiakpgktit
     1801 lncsvdgnpp paiswmlpng twfsssirts qfstgsngtl tiyspeaqha gryrcaarnq
     1861 vgyieklmll evaqkpkilt rpaglvkgvs geplslhcla egspkprlaw tlpggrvler
     1921 pqlagrhall engtlliraa aahdagnylc rahndagdss ltvpvvvtay aprimgrppa
     1981 avravpgaav qllcvalgvp kpeitwelpd rsilstarqg rgsggellhp tgtlllqnpr
     2041 psssgtykct arnplgtdta vtyvhvi
//
LOCUS       XP_041323914             391 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: succinate receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323914
VERSION     XP_041323914.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467980.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 12% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="LOW QUALITY PROTEIN: succinate receptor 1"
                     /calculated_mol_wt=44205
     Region          93..375
                     /region_name="7tmA_SUCNR1_GPR91"
                     /note="succinate receptor 1, member of the class A family
                     of seven-transmembrane G protein-coupled receptors;
                     cd15378"
                     /db_xref="CDD:320500"
     Region          93..120
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320500"
     Region          127..152
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320500"
     Site            order(148,151..152,164..169,171..172,175,220,222..226,240,
                     242..244,253,256..258,260..262,264..265,314,317..318,
                     320..321,324,342..343,345..347,350,353..354)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320500"
     Region          164..194
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320500"
     Region          206..228
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320500"
     Region          253..282
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320500"
     Region          294..324
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320500"
     Region          343..368
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320500"
     CDS             1..391
                     /gene="SUCNR1"
                     /coded_by="XM_041467980.1:1..1176"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121353820"
ORIGIN      
        1 mcdwdslrit kgwallfprl cqgtararga lsppcgpags pgswegevlp aprqlskqvp
       61 pspglvtrqh palamavnet cdyfstnrvl ekyylttlys lefiigaign tivvfgyvfc
      121 lkkwksgniy lfnlsisdll flctlpilvn syskdqwake silchsnrfl lhanlyssif
      181 fltvisadry mlmkhpfrdh ilqkrrtavm vsvaiwigvi lellpllyfl epltaannyk
      241 cldyassgdp eknlvysmll tvfgflipll tmccfyvkmv rflrnrseqi rsaltlekpl
      301 tlviltvvif sllftpyhvm rnvriasrip alnasectqg iistiyiitr pfaflnsain
      361 pvfyflmgdh fremlmaktr qllgrltstg k
//
LOCUS       XP_041323915             684 aa            linear   VRT 06-MAY-2021
DEFINITION  probable G-protein coupled receptor 149 [Pyrgilauda ruficollis].
ACCESSION   XP_041323915
VERSION     XP_041323915.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467981.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="probable G-protein coupled receptor 149"
                     /calculated_mol_wt=73705
     Region          39..361
                     /region_name="7tmA_GPR149"
                     /note="G protein-coupled receptor 149, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15011"
                     /db_xref="CDD:320139"
     Region          39..65
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320139"
     Region          71..96
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320139"
     Site            order(93,96..97,107..112,114..115,118,165,167..171,197,
                     200..202,204..206,208..209,310,313..314,316..317,320,
                     327..328,330..332,335,338..339)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320139"
     Region          107..137
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320139"
     Region          153..173
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320139"
     Region          199..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320139"
     Region          290..320
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320139"
     Region          328..353
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320139"
     CDS             1..684
                     /gene="GPR149"
                     /coded_by="XM_041467981.1:1..2055"
                     /db_xref="GeneID:121353821"
ORIGIN      
        1 mprtmsvtpg nlslngtsfl tenhsimdkp neqrtwnvfl fcltfaialp allgsiyslv
       61 sllklqnktt vsmivtslaa ddlisvvpvi ifmlmqwsse alpqplctts afmylfqgis
      121 snlkgslivs ynfytlnttg tlscssskrr vsvvwailti wtaslltcil plcgwgryip
      181 tswgcfadra ssyilfvlvv yslcfslvav lavpltlqll csgepqllht ehlqgsggci
      241 spgtpwgcga aappmplldp gdktrepcqn seavfgqgva esstqsrsft vgfaqkrfsl
      301 ilaltkvllw lpmmiqmavq yitglqslsf etlsfllsal aaavtplfvl sqhwlhlpcg
      361 cvincrrnsy avssqgaktk rsgfefnlsf qqgcgiyris lesppqpssd gkpssypsla
      421 scgcrepgsg sdggtralah gspgtppagp gpcqgqqgts aappafpegp ewrlcheesp
      481 apqlsdwewc rsksernprq rsggalavpl cavqgtvslq aptgktlsls tyevsseghr
      541 itpaakkiev yrsksvghep spgqardawa dtsvkihlev leicdteeal dtvsivsnis
      601 qsssarspsl rysrkenrfv ccelgesasy sllvpsgsdf sisipdtvea hrrnsqqrpa
      661 paghqediql lnrayrereq qghg
//
LOCUS       XP_041323916              35 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323916
VERSION     XP_041323916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467982.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..35
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..35
                     /product="sarcoplasmic/endoplasmic reticulum calcium
                     ATPase regulator DWORF"
                     /calculated_mol_wt=3611
     Region          1..35
                     /region_name="DWORF"
                     /note="DWarf Open Reading Frame (DWORF); cd20247"
                     /db_xref="CDD:380779"
     CDS             1..35
                     /gene="STRIT1"
                     /coded_by="XM_041467982.1:1..108"
                     /db_xref="GeneID:121353822"
ORIGIN      
        1 maepaqapls rllvpvllal gwivgcalmv yivfs
//
LOCUS       XP_041323917             390 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-gated potassium channel subunit beta-1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323917
VERSION     XP_041323917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467983.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..390
                     /product="voltage-gated potassium channel subunit
                     beta-1-like"
                     /calculated_mol_wt=43303
     Region          88..382
                     /region_name="AKR_SF"
                     /note="Aldo-keto reductase (AKR) superfamily; cl00470"
                     /db_xref="CDD:444925"
     Site            order(106,121,181,211..212,237,266..272,327,344..347,352,
                     355..356)
                     /site_type="active"
                     /db_xref="CDD:381296"
     CDS             1..390
                     /gene="LOC121353823"
                     /coded_by="XM_041467983.1:268..1440"
                     /db_xref="GeneID:121353823"
ORIGIN      
        1 mlaartgtvg gksadeslkl rkqsvlslgs rdralkssae gskegrarag qpqqrarrla
       61 llrelemnwy lrvcelshef tiayttgmph rnlgksglrv sclglgeylw plcqpsgaav
      121 gpsgvprpce eqaevilgni lkkkgwraet erglsrkhii eglkaslqrl qleyvdvvfa
      181 nrpdnntpme eivramthvi nqgmamywgt srwsameime aysvarqfnm ippvceqaey
      241 hlfqrekvev qlpelyhkig vgamtwspla cgiisgkygn gvpessrasl kcyqwlkeki
      301 iseegrkqqg klkdlspiae rlgctlpqla vawclrnegv ssvllgssnp eqlienlgai
      361 qvlpkmtshi vneidnilgn kpyskkdyrs
//
LOCUS       XP_041323918             282 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: lysosomal amino acid transporter 1 homolog
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323918
VERSION     XP_041323918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467984.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 18% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="LOW QUALITY PROTEIN: lysosomal amino acid
                     transporter 1 homolog"
                     /calculated_mol_wt=30878
     CDS             1..282
                     /gene="LOC121353825"
                     /coded_by="XM_041467984.1:1..849"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 3 bases in 2 codons"
                     /db_xref="GeneID:121353825"
ORIGIN      
        1 mfriwvpagd wgccsrldvr gfaqrmfsip nriwgfarag nggrnqlvgl elhpgvmapq
       61 xalssspaes rrlcgigapw vwhllqgcar dvwegwsxgl iaivcslpaa ivtaafyenk
      121 dlimipqfvy cklknqkvtk gspslrnlgt awivgcgals gtalyqlllr nqqhrpaipr
      181 nnsspdliem pgficgcvsc vflgsrfpql yinysredaq mhfyllfala lmgnctcgls
      241 lvlkmpepks sralcfvhhl pwligsfgvl fldilvsfsy ys
//
LOCUS       XP_041323919            1676 aa            linear   VRT 06-MAY-2021
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323919
VERSION     XP_041323919.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467985.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1676
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase eta-1"
                     /calculated_mol_wt=185441
     Region          34..140
                     /region_name="PH_PLC_eta"
                     /note="Phospholipase C-eta (PLC-eta) pleckstrin homology
                     (PH) domain; cd13364"
                     /db_xref="CDD:270170"
     Site            order(39,41,51,68,123)
                     /site_type="other"
                     /note="putative Rac1 binding site [polypeptide binding]"
                     /db_xref="CDD:270170"
     Site            order(42,44,48,50,52,67..68)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270170"
     Region          158..298
                     /region_name="EFh_PI-PLC"
                     /note="EF-hand motif found in eukaryotic
                     phosphoinositide-specific phospholipase C (PI-PLC, EC
                     3.1.4.11) isozymes; cl28895"
                     /db_xref="CDD:333715"
     Region          158..187
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          194..223
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          228..256
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          265..298
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          310..715
                     /region_name="PI-PLCc_GDPD_SF"
                     /note="Catalytic domain of phosphoinositide-specific
                     phospholipase C-like phosphodiesterases superfamily;
                     cl14615"
                     /db_xref="CDD:472694"
     Site            order(326,356,358,405,456,670)
                     /site_type="active"
                     /db_xref="CDD:176498"
     Site            order(326,371)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176498"
     Region          745..869
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(774,798,827,829,834,836)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     CDS             1..1676
                     /gene="PLCH1"
                     /coded_by="XM_041467985.1:48..5078"
                     /db_xref="GeneID:121353826"
ORIGIN      
        1 msywsldkks clqycrhfla dngvfhverc msvmqsgtqm vklksgtkgl vrlfyldehr
       61 tcirwrpsrk sekakivids iykvsegrqs eifhrhaegs fdpsccftiy hgnhletldl
      121 itsnpeeart witglkylla gisdedslak rqrthdhwvk qtfeeadkng dgllnieeih
      181 qlmhklnvsl prrkvrqmfq eadtdenqgt lnfeefsvfy kmmslrrdly llllsysdkk
      241 dhltaeelaq flrveqkmnn vtpeycldii qkfevseenk kqnvlgiegf tsfmrspace
      301 vsnplhrevh qdmeqplchy fiasshntyl sgdqllsqsr aemyarvlqa gcrcvevdcw
      361 dgpdgepvvh hgytltskil frdvaetink yafiknefpv ilsienhcsi qqqkkiaqyl
      421 keifgdkldl ssvstgdprq lpspqdlkgk ilvkgkklpc slgadaeege vseedsadei
      481 eddcklkpcf sngatqhqve sfirtklesl lkesqirdke dpdsftvkal lkathqsfsv
      541 nlkqnldtke ggkkshgrsl mgnfgkhkra akaaakahsa sddedgqqhp pgkepgqphs
      601 rlarrrktvk lcralsdlvv ytnsvaaqdi vddgstgnvl sfsetrahqa vqqkaeqfml
      661 ynqrqltrvy psayridssn fnpvpywnvg cqlvalnyqs egrvmqlnea kfrvngncgy
      721 vlkpqqmckg tfnpysadpl paspkkqlil kiisgqqlpk ppdsvlgdrg eiidpfveve
      781 iiglpvdcck dqtrvvddng fnpvweetlt ftihmpeial vrflvwdhdp igrdfvgqrt
      841 vafsslvpgy rhvyleglte asifvhiiin etygkwspli lnpsytimhf lgatkskqli
      901 glrglfskap kagaaeasgh harkrsiger ilrrtasapa kgrkkskmgf leaaeikdsa
      961 septdlkdke gvvrrpnrtl qarpasmpvd rflmvelpcp aedtaqeakg eentsansdd
     1021 ntneketslk elgfpyseqk snasnlasqf kkendqrdst adclvpppqe qpehlvfadg
     1081 vaqanhlvdy qennlsdetv plmqdsdsel pteklhhknc adgkkeddtk gskegnislm
     1141 gtsvsqnaev enhkydtkks taaplclsst vcsegpdchs tvalqdsdis hlidevslst
     1201 eseldsavst ligqldgtdd qtplapvssp hgsssqtprv gaavphvfaa dlsspcrhnf
     1261 tptksnkssl fsapntamfs sledaeysty tiiheaspas eckshralvc kkrlnslesn
     1321 lpgscsssls lqnanpkrnc atksgpswea peehsdsssl levdgdcqdl lvtaceyrre
     1381 dmsqlaspvs lrqkqdlghg gdrtsgsssa aalcaaawhc swnsgaagsq lalpacenag
     1441 lwrqqrsekh kaavrappas sacpprpaal pfpphpaiqq sspckskslg dltsediscn
     1501 feskyqyisr sfissglrdr kaaamqgvrp hstdalteql rrllsleqds replcprqpd
     1561 edcpralvrk lssrsqsrvr niasrarerq eaagkprpcg gsavpgvvlr skaagpphaa
     1621 nrhstgsyig rylhgcpger rgvpegacsa lphgcgelpl ppgaqeqpei yfllrl
//
LOCUS       XP_041323920             380 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/Arginine-related protein 53 [Pyrgilauda ruficollis].
ACCESSION   XP_041323920
VERSION     XP_041323920.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467986.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="serine/Arginine-related protein 53"
                     /calculated_mol_wt=42862
     CDS             1..380
                     /gene="RSRC1"
                     /coded_by="XM_041467986.1:1..1143"
                     /db_xref="GeneID:121353827"
ORIGIN      
        1 marrslwppg rarrwigaac ppprkalgsn rgrggsarrs pvdqellprr pevsemgrrs
       61 sdteeegrsr rkkkhrrrss sssssdsray srkksgrksr srsrsrdlps wshsyekrrr
      121 hrssssssyg srrkrsrsrg rgksyrsqrs rsksrtrrsr srarqrsysr ssersghrrt
      181 psgsrerrka rdkdkakdkg kgkdkethgt kagdsanika glehltpaeq akarlqlvle
      241 aaakadealk akerseeeak rkkeedqatl ldqvkrvkei eaiesdafvp qtfrsskevk
      301 ksaeppelqq epvnvgagap eaaaaekepp aaniptaiky qddnslahpn lflekaeaee
      361 kwfqrlvalr qerlmgspva
//
LOCUS       XP_041323922             136 aa            linear   VRT 06-MAY-2021
DEFINITION  IQ domain-containing protein J [Pyrgilauda ruficollis].
ACCESSION   XP_041323922
VERSION     XP_041323922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467988.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..136
                     /product="IQ domain-containing protein J"
                     /calculated_mol_wt=15007
     Region          4..>132
                     /region_name="IQCJ-SCHIP1"
                     /note="Fusion protein IQCJ-SCHIP1 with IQ-like motif;
                     pfam15157"
                     /db_xref="CDD:434507"
     CDS             1..136
                     /gene="IQCJ"
                     /coded_by="XM_041467988.1:1..411"
                     /db_xref="GeneID:121353828"
ORIGIN      
        1 mrleelrrlq htleqvndgk dslqshqltm deenniqeyp inlqpleskv kiiqrawreh
       61 lqrqdlspsp elqdkgspsp tsptsprspm sptspasgkm srsvsmntfs dsstpvspag
      121 ippfafaall sgvwdk
//
LOCUS       XP_041323923             502 aa            linear   VRT 06-MAY-2021
DEFINITION  schwannomin-interacting protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323923
VERSION     XP_041323923.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467989.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 58% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="schwannomin-interacting protein 1-like"
                     /calculated_mol_wt=54344
     Region          279..493
                     /region_name="SCHIP-1"
                     /note="Schwannomin-interacting protein 1; pfam10148"
                     /db_xref="CDD:431089"
     CDS             1..502
                     /gene="LOC121353829"
                     /coded_by="XM_041467989.1:1..1509"
                     /db_xref="GeneID:121353829"
ORIGIN      
        1 mdlgsdagss rsssesnssk atpcsegkss pspssldlaa ledseeeeee eedggsppsp
       61 prcpaahgrr cgpsptfpeh pwalpraapg spgpppagas pglcrprgcg sagprlrlwt
      121 ehpgvrsehp gfrsehpgvr sehpgvrseh pgvrsehpgv rsehpgvrsk hpgvrsehpg
      181 vrsehpgvrs ehpgvrsehp gvrsehpgvr sehpgvrseh pgvrsehpgv rsehpgvrse
      241 hpgarsehpg vrsehpgvrs ehpgvrsehp gvrsehpgar qaeqprgfsg gtpsprgrqc
      301 hlspcsprlq sgmnlqicfv ndsgsdkdsd gddsktetsl dtplspmskq sssysdrdtt
      361 eeeseslddm dflsrqkklq aeakmalama kpmakmqvev ekqnrkkspv adllphlphi
      421 seclmkrslk ptdlrdmtig qlqvivndlh sqieslneel vqlllirdel hteqdamlvd
      481 iedltrhaes qqkhlaekmp ak
//
LOCUS       XP_041323924             275 aa            linear   VRT 06-MAY-2021
DEFINITION  fibrinogen alpha chain-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323924
VERSION     XP_041323924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467990.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 40% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="fibrinogen alpha chain-like"
                     /calculated_mol_wt=26905
     Region          29..145
                     /region_name="IL12"
                     /note="Interleukin-12 alpha subunit; pfam03039"
                     /db_xref="CDD:460785"
     CDS             1..275
                     /gene="LOC121353830"
                     /coded_by="XM_041467990.1:1..828"
                     /db_xref="GeneID:121353830"
ORIGIN      
        1 mqrggngtgr agsgtgnsgn nsgnnggnar clsrsrelle aanaapqrlk esntlgfect
       61 leevdlqdit esqmntlrac taedpgpgnc ptlekstlde gkclqgised vrayraqlrt
      121 lpdpqllaal dgmmealgss tgwvpeaplg ssgspgssgs sgspgspgss glgssasgsl
      181 gssglgssgs sasgslgssg lgplglgssa sgslglessg lgslgsgpsg psgslgfpgl
      241 gwapfperlr lcgvlqalrv rsiticrvls flssp
//
LOCUS       XP_041323925             296 aa            linear   VRT 06-MAY-2021
DEFINITION  skin secretory protein xP2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323925
VERSION     XP_041323925.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467991.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="skin secretory protein xP2-like"
                     /calculated_mol_wt=30746
     Region          <68..285
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..296
                     /gene="LOC121353831"
                     /coded_by="XM_041467991.1:1..891"
                     /db_xref="GeneID:121353831"
ORIGIN      
        1 makncwftnl scwalrvtkp rqesssrgwk qleefciwie ywerklssck rvkftnslgg
       61 effrglwsgi psvlpspepa aipaagtess gsipvssaia apqtallpae ggsrgpgsap
      121 alpsvrpslp svpwllslpa lprlhpllss arsapapaia vrgprplpsg aeraapspsr
      181 garsgsiagg aprerlhgra eelgaapspa elpgsgsite qrsserlhrr aepgaapspa
      241 elpkrsperl hhgrsssgga rsgsiaggap reelgaaplp aelpgrprrv lrvpaa
//
LOCUS       XP_041323926             447 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: otolin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323926
VERSION     XP_041323926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467992.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 12% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..447
                     /product="LOW QUALITY PROTEIN: otolin-1"
                     /calculated_mol_wt=45268
     Region          <85..>306
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          307..441
                     /region_name="C1Q"
                     /note="Complement component C1q domain; smart00110"
                     /db_xref="CDD:128420"
     CDS             1..447
                     /gene="OTOL1"
                     /coded_by="XM_041467992.1:1..1344"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121353832"
ORIGIN      
        1 mpgcprpvpl llalaavpal aalkvtpavl ytkpkpsqps vpgkiplpaa pgraefptlf
       61 plenstldsa efffnccdcc ppaagpqgrp gpqgptgpkg ekgdaglpgp pgtpgpqgpk
      121 gskgerggkg eqgergasgs pgypgkpglq geagakgnkg sygfpglkgq kgakgdtcdn
      181 gtkgdkgdrg dpgepgagge qgdkgekgdt gekgycgegg pggrgakgdr geggtkgekg
      241 skgdtgtegm rgaagkqgek geqgrkgdkg dlgpagpsgp kgdagtkggr gapgrkgsrg
      301 akgargdvpk aprsafsagl srpfpppnvp irfdrvwfne rhdydpatgk fncsvpgayv
      361 fsyhvtvrgr parlslvass rrvakardtl ygqdidqasf ltilklrvgd qvwlevgkdw
      421 nglyagaedd svftgfllyp dgfevll
//
LOCUS       XP_041323927            1675 aa            linear   VRT 06-MAY-2021
DEFINITION  sucrase-isomaltase, intestinal [Pyrgilauda ruficollis].
ACCESSION   XP_041323927
VERSION     XP_041323927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467993.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1675
                     /product="sucrase-isomaltase, intestinal"
                     /calculated_mol_wt=190033
     Region          46..89
                     /region_name="Trefoil"
                     /note="Trefoil (P-type) domain; pfam00088"
                     /db_xref="CDD:459666"
     Site            order(61,84..85)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:238059"
     Site            order(76,84)
                     /site_type="active"
                     /note="putative binding specificity loop [active]"
                     /db_xref="CDD:238059"
     Region          106..216
                     /region_name="NtCtMGAM_N"
                     /note="N-terminal barrel of NtMGAM and CtMGAM,
                     maltase-glucoamylase; pfam16863"
                     /db_xref="CDD:465286"
     Region          208..324
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            245
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          324..672
                     /region_name="GH31_MGAM_SI_GAA"
                     /note="maltase-glucoamylase, sucrase-isomaltase, lysosomal
                     acid alpha-glucosidase; cd06602"
                     /db_xref="CDD:269888"
     Site            order(341,369..370,406,448,483,485..486,568,581,584,617,
                     642)
                     /site_type="active"
                     /db_xref="CDD:269888"
     Region          914..955
                     /region_name="Trefoil"
                     /note="Trefoil (P-type) domain; pfam00088"
                     /db_xref="CDD:459666"
     Site            order(927,950..951)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:238059"
     Site            order(943,950)
                     /site_type="active"
                     /note="putative binding specificity loop [active]"
                     /db_xref="CDD:238059"
     Region          971..1088
                     /region_name="NtCtMGAM_N"
                     /note="N-terminal barrel of NtMGAM and CtMGAM,
                     maltase-glucoamylase; pfam16863"
                     /db_xref="CDD:465286"
     Region          1073..1194
                     /region_name="GH31_N"
                     /note="N-terminal domain of glycosyl hydrolase family 31
                     (GH31); cd14752"
                     /db_xref="CDD:270212"
     Site            1117
                     /site_type="active"
                     /db_xref="CDD:270212"
     Region          1175..1540
                     /region_name="Glyco_hydro_31"
                     /note="Glycosyl hydrolases family 31; pfam01055"
                     /db_xref="CDD:460044"
     CDS             1..1675
                     /gene="SI"
                     /coded_by="XM_041467993.1:1..5028"
                     /db_xref="GeneID:121353833"
ORIGIN      
        1 mgrkfsglel tlialftlvt viacvligll atgqpgvksp dfypqcqntp vaeridcipd
       61 qlatqstcsl rgccwspqsd anvpwcffsh khgyqvrgsq rstragfeat ldrlpspslf
      121 gndiqtvllt aeyqtnnrfr fkitdpntrr fevphehvkp fegsmasnpn ykvelkqnpf
      181 glvvtrasng kvlfdttigp lqyaeqflql siklpssniy gvgehvhkqy rhdvnwktwp
      241 lfsrdtgpsa amdnlygtht fflcledntg asfgvflmns namefvvqpa pavtyrtigg
      301 ildfyiflgn tpeqvvqeyl qfvglpalpa ywnlgfqlcr ygyasldevk evvernravg
      361 lphdiqvidi dymenrkdft ydkvkfkdlp kfaaylhehg qkyiiildpa istqkmadgs
      421 pygsyvrgtd rnvwvnesdg ttlvgevwpg etvfpdytsl eatnwwanec klfydmvpyd
      481 giwidmnevc nfvqgskkgc adnelnyppy tprildrvmy sktlcldavq swgkqydvhn
      541 lygysmtlst rkaiealfpg krsflisrst fagsgkhggh wlgdnaatwd qlkwaipgml
      601 efnlfgipyv gadicgfsed tteelcrrwm qvgafypfsr nhngehvihq dpavfgansl
      661 lvnsskhyln irytllpyly tllykahtqg dtvtrpllhe fysdeitwdi drqflwgpgl
      721 lispvlepgv estrvyfpda ewyeydtgep mqlkkvwqni ptpgdkmglh lrggyifptq
      781 kpeittvasr knpmgliial dinneasgdl fwddgestdt idkkayiyye fkvsnnalqm
      841 tathsnyadp nnlkfeeiki lglskeiasv svsqnnvvqa ytaditydpa tkvavikglq
      901 lelgksytik wtlnmniner fdchpspnat kekcqqlgcs weetsnpdip scyysssnpy
      961 lvdkvdysst givatltldd srvraranda yttpistlrl evkyhhnnml qfkiydyanp
     1021 ryevpvplnl pssptsssqd rlydvslqik pfgiqvrrrs tgtviwssgl ptftfsdmfi
     1081 qistrlasqy iygfgesehp sfrhnmswht wgmftrdqpp tyklnsygvh pfymaleedg
     1141 nahgvlllns namdvtfqpt paltyrtigg ildfymvlgp tpelvvqeyt eligrpvmpp
     1201 ywslgfqlcr ygyandqeva qlveemkaaq iphdvqyvdi dymernldft lsprfaglpa
     1261 linkikaegm rfiiildpai sgnetnypaf trgvaqnifv qwsdtkeily skvlsrdeal
     1321 qgatkergii isrstypssg rwvghwlgdn taawdqlhks iigmmefslf gisytgadic
     1381 gffkdsqyel cvrwmqlgaf ypysrnhnek gtrrqdpasw ddkfkemsrd vlnirytllp
     1441 ylytllydah ahgstvirpv lhefvgdktt wdideqflwg pallispvmr endrsvrayf
     1501 pdarwydyyt nadtgfrkqf qslsaplehi nlhirggyil pwqapattta ysrknpmglt
     1561 valddsllaa ghlywddgvr idayedgvyl ltsftakqnv leirvthqny tdpnnlmftd
     1621 ikvlgvpssv tqvtvsqdga aipsahkvay nsnkklleit nlqlklgqsy tlqws
//
LOCUS       XP_041323929             923 aa            linear   VRT 06-MAY-2021
DEFINITION  SLIT and NTRK-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041323929
VERSION     XP_041323929.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467995.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..923
                     /product="SLIT and NTRK-like protein 3"
                     /calculated_mol_wt=102977
     Region          83..103
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <94..>213
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          104..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          128..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          152..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          176..198
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          225..389
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          233..>271
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     Region          <400..>564
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          412..434
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          435..458
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          459..482
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          483..506
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          507..529
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          530..552
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          563..>601
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     CDS             1..923
                     /gene="SLITRK3"
                     /coded_by="XM_041467995.1:1487..4258"
                     /db_xref="GeneID:121353834"
ORIGIN      
        1 mmkpstaetl hkgrmlwiil lstialawtt pipliedsee ldepcfdpcy cevkeslfhi
       61 hcdnkgfini sqiteswsrp fklylqrnsm rklytnsflh lnnavsinlg nnalqdiqtg
      121 afnglrvlkr lylhenkldi frndtflgle sleylqadyn vikriesgaf rnlsklrvli
      181 lndnlipmlp tnlfksvslt hldlrgnrlk vlsyrgmldh igrslmeiql eenpwnctce
      241 ivqlkswler ipytalvgdi tcetpfhfhg kdlreikrsk lcpmlsdsev easlgipqls
      301 sskenawptk pssmlssfhf tassveykts nkqpkptkqp raprppptpr glypgpnqpp
      361 vaayqtrppi piicptgcsc slhindlglt vnckergfhn isellprpln akklylsgnl
      421 iqkiyrsdfw nfssldllhl gnnrisyvqd gafinlpnlk slylngndie rltpgmfrgl
      481 qslhylyfey nlireiqpaa fslmpnlkll flndnllrtl ptdafagtsl arlnlrnnhf
      541 lalpvagvle hlhaivqidl klnpwdctce lvplkqwlea lssvsvvgev lcaspeplar
      601 rdlrgvsepv ldhflgqsrf vchlfdlflt wgivnvkilp kdselvigdp cawplvllll
      661 ekagvelmlv qlgqvggqgv yraqlrrqlc wqclqghglh herggpgers pekappaghv
      721 ydyiphpvtq mcnnpiykpr eeeeaagggg geaaellrgg gergfahpaa paaapepgss
      781 yrtllekeqe wslavsssql ntivavhpqh paggglaaga lgaaaaaagg aprdrdrppp
      841 cavgfvdcly gtvpklkelh vhppgmqypd lqqdarlket llfaagkgfp dhqtptseyl
      901 elraklqtkp dylevlektt yrf
//
LOCUS       XP_041323930             233 aa            linear   VRT 06-MAY-2021
DEFINITION  protein tilB homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041323930
VERSION     XP_041323930.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467996.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="protein tilB homolog"
                     /calculated_mol_wt=27544
     Region          84..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <97..>217
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          111..131
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          132..153
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          154..169
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          178..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..233
                     /gene="LOC121353835"
                     /coded_by="XM_041467996.1:1..702"
                     /db_xref="GeneID:121353835"
ORIGIN      
        1 mnaldswkcs nqlpsdsfky lswcdieehg vrgnqllcpr vrqgpseeel ffrkeehtlk
       61 rrkqvtgtek werrlqenwe ncaelnlsfq dlgdlyqven fqrilrrlir veklwlvdns
      121 ltdlsairlp rcrelnvnkn hftsfkqlpk ipqiqhlsla ennittlsgi sdfrhtples
      181 lilkrnpcef qeryrqlvfs nlpnlkildg ipklpedcsp pevrffyrmc til
//
LOCUS       XP_041323931             302 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: spermatogenesis-associated protein 16
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323931
VERSION     XP_041323931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467997.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 27% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="LOW QUALITY PROTEIN: spermatogenesis-associated
                     protein 16"
                     /calculated_mol_wt=33797
     Region          <64..301
                     /region_name="NYD-SP12_N"
                     /note="Spermatogenesis-associated, N-terminal; pfam15015"
                     /db_xref="CDD:464447"
     CDS             1..302
                     /gene="SPATA16"
                     /coded_by="XM_041467997.1:1..909"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 3 bases in 2 codons"
                     /db_xref="GeneID:121353836"
ORIGIN      
        1 millyeghsy qshgsrqgnr kkdnkrnaad ranpeqksen nekqartkee ttletvasfl
       61 vqpcskgiav ddplktspdd istlatdiea ellicfletg eawsiilnpv slqnhlhqaa
      121 cswclqrdse aaaevsfsvm ytpfvkgdka dkikeanknf akehpdymql iftavltdcg
      181 fqkqknlers ltrklpifsd qkapfsptme eetkqsgdrt gekyxvmdfi rsttikisfc
      241 nnrreeeqpq vmnqvmaelv tipxlqeatw egaellqslm adamdilegk seehawtkie
      301 ka
//
LOCUS       XP_041323932             784 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive N-acetylated-alpha-linked acidic dipeptidase-like protein
            2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323932
VERSION     XP_041323932.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467998.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..784
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..784
                     /product="inactive N-acetylated-alpha-linked acidic
                     dipeptidase-like protein 2"
                     /calculated_mol_wt=86836
     Region          247..399
                     /region_name="PA"
                     /note="Protease-associated (PA) domain. The PA domain is
                     an insert domain in a diverse fraction of proteases. The
                     significance of the PA domain to many of the proteins in
                     which it is inserted is undetermined. It may be a
                     protein-protein interaction domain. At...; cl28883"
                     /db_xref="CDD:333703"
     Site            333..335
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:238300"
     Region          415..637
                     /region_name="Zinc_peptidase_like"
                     /note="Zinc peptidases M18, M20, M28, and M42; cl14876"
                     /db_xref="CDD:472712"
     Region          660..770
                     /region_name="TFR_dimer"
                     /note="Transferrin receptor-like dimerization domain;
                     pfam04253"
                     /db_xref="CDD:461238"
     CDS             1..784
                     /gene="NAALADL2"
                     /coded_by="XM_041467998.1:1..2355"
                     /db_xref="GeneID:121353837"
ORIGIN      
        1 mlfgdkkmay hkvnadqraq ghspyldnde lqataldlew dmekeleepg fdhfrldsta
       61 qhhvgnsqsp dldlepiqps sspkgrfqrl qedpdyishy trqapksnrc sflrilkvfc
      121 talilfifgi vigyyarqkc pspptsqepn npqiyheilk eikaeniqri yrdllefpre
      181 ddadlamkil gqwrsqgled vrlvnysvll dlpgpssntv tlqnsgecfy psgqrcstdp
      241 rtlhsqdlly syaaysakgt leaelvdvqy gtmedliriq amtnvtkkia llklgqspll
      301 yklslleyag fggvlvytdp cdlpktadla dkafmvslns ggdpstpgya sidgsyrqnr
      361 lnlttllvqp isavlarklv slpedtsqkd rcaplqlpaa vkktislniq svttyktisn
      421 vigylkgavf pdryvvigsh hsslqgfggq gwasstavit allqalmpev rrgwrpdrtl
      481 lfcswggtal gnvgsyewae dlrsvlqrnv vayislhnpv tgnstlrpva spslqqlaae
      541 iqslncvekp rcpesnvssv qiqgdsdyfi nhlgvpatqf syedikasen ssflsealyp
      601 vhatkteeld psfslhetia kltgqvtlqi atdpvlpfna ldialevqns lkgdeagipq
      661 llavasrlrd taelfqsdem rpandpeera pvrvrmlndv lqgleksfll qqappglyrn
      721 ilyrlddrts qfsvlleale hcklhqsnet iqaalsevln sinsaqvyfk agldvfetal
      781 agkk
//
LOCUS       XP_041323933             691 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor accessory protein [Pyrgilauda ruficollis].
ACCESSION   XP_041323933
VERSION     XP_041323933.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041467999.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..691
                     /product="interleukin-1 receptor accessory protein"
                     /calculated_mol_wt=78022
     Region          26..133
                     /region_name="Ig1_IL1R_like"
                     /note="First immunoglobulin (Ig)-like domain of
                     interleukin-1 receptor (IL1R), and similar domains;
                     cd20992"
                     /db_xref="CDD:409584"
     Region          27..30
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409584"
     Site            order(28,30..37)
                     /site_type="other"
                     /note="antagonist binding site [polypeptide binding]"
                     /db_xref="CDD:409584"
     Region          35..39
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409584"
     Region          43..48
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409584"
     Region          68..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409584"
     Region          81..83
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409584"
     Region          92..96
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409584"
     Region          98..102
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409584"
     Region          111..119
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409584"
     Region          122..133
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409584"
     Region          146..238
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          159..163
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409585"
     Region          177..181
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409585"
     Region          198..202
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409585"
     Region          212..217
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409585"
     Region          229..232
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409585"
     Region          246..352
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          265..269
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          282..286
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          318..322
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          333..338
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          345..348
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          409..545
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..691
                     /gene="LOC121353838"
                     /coded_by="XM_041467999.1:84..2159"
                     /db_xref="GeneID:121353838"
ORIGIN      
        1 mkmvsvllvs lwlsmvtlgr gsercddwgv dtmkqiqiyd geparikcpl fetflkynys
       61 tahsagltli wyriaqdrdl eepinyrlpd nhiskdkdtl wfwpallndt gnytcmlrnt
      121 tycskvafpl evvpkdqhsc vshsikptee mfylehanqk itcpdidgfy pasvtptvkw
      181 ylncnsvdgf yerypqgprl vigivrsayk gnytcivtfk dhgrtynltr tikmkvvgsp
      241 nkalppqfts pnekvvyele agddlilpce vfftflkdsr tevwwtidgr ntdditdpki
      301 kvtqseitrd fedktlvrtl tvakataeel krnytcharn akgeersqav vrvkvvapky
      361 tvelacglga tillvvvliv iyhvywlemv lfyrahfgtd etildgkeyd vyvsyarnae
      421 eeefvlltlr gvlenefgyk lcifdrdslp ggntteavfd fiqrsrrmiv vlspdyltek
      481 sisllefklg imcqnaiatk livveyrplq cthpsilqlk esvsfvtwkg ekskrsgsqf
      541 wkalrlalpl rslsasagwn escssqsdis ldpvqrrrsr lkgqpdprga tpvtlthggt
      601 asaseskakq rakrfltcrc cgtscngssr hkhqavaepr wdshlcnpgs grppaqglqg
      661 raraeppaaq gpalalchys dlsnnndfyv l
//
LOCUS       XP_041323934             439 aa            linear   VRT 06-MAY-2021
DEFINITION  actin-like protein 6A, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041323934
VERSION     XP_041323934.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468000.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..439
                     /product="actin-like protein 6A"
     Region          23..430
                     /region_name="ASKHA_NBD_Arp4_ACTL6-like"
                     /note="nucleotide-binding domain (NBD) of the
                     actin-related protein 4 (Arp4)-like subfamily; cd13395"
                     /db_xref="CDD:466846"
     CDS             1..439
                     /gene="ACTL6A"
                     /coded_by="XM_041468000.1:<1..1320"
                     /db_xref="GeneID:121353839"
ORIGIN      
        1 vagsaargag ggggvyggde vgalvfdigs ytvragyage dcpkvdfpta igvvlerdng
       61 stlmeidgdk gkqggptyyi dtnalrvpre nmeaisplkn gmiedwdsfq aildhtykmh
      121 ikseaslhpv lmseapwntr akrekltelm fehynipaff lcktavltaf angrstglil
      181 dsgathttai pvhdgyvlqq givksplagd fitmqcrelf qemnveiipp ymiaskeavr
      241 egspanwkrk eklpqvtrsw hnymcncviq dfqasvlqvs dstydeqvaa qmptvhyefp
      301 ngyncdfgae rlkipeglfd psnvkglsgn tmlgvshvvt tsvgmcdidi rpglygsviv
      361 aggntliqsf tdrlnrelsq ktppsmrlkl iannttverr fsswiggsil aslgtfqqmw
      421 iskqeyeegg kqcverkcp
//
LOCUS       XP_041323935             237 aa            linear   VRT 06-MAY-2021
DEFINITION  EEF1A lysine methyltransferase 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041323935
VERSION     XP_041323935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468001.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="EEF1A lysine methyltransferase 4"
                     /calculated_mol_wt=25458
     Region          43..146
                     /region_name="Methyltransf_25"
                     /note="Methyltransferase domain; pfam13649"
                     /db_xref="CDD:463945"
     CDS             1..237
                     /gene="EEF1AKMT4"
                     /coded_by="XM_041468001.1:1..714"
                     /db_xref="GeneID:121353840"
ORIGIN      
        1 merrrapaap prdgggargp aggcagasrq gavwhraavp htgcgnsals hdlhelgytd
       61 vtsidfspac iaamrarhar cpglrwavmd iralafpdas fdvvlekgtl dvlmveetdp
      121 whispqaaaa mrrvlaevsr vlrpggcfis itfaqphfrk phyaqeafgw slrhaacgdg
      181 dagafhyfvy vmrkgqpldp rdvalgrrlh qpppapappp plappddded yllaiql
//
LOCUS       XP_041323936             693 aa            linear   VRT 06-MAY-2021
DEFINITION  endothelin-converting enzyme-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323936
VERSION     XP_041323936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..693
                     /product="endothelin-converting enzyme-like 1"
                     /calculated_mol_wt=79999
     Region          113..691
                     /region_name="M13"
                     /note="Peptidase family M13 includes neprilysin and
                     endothelin-converting enzyme I; cd08662"
                     /db_xref="CDD:341056"
     Site            order(143,483,488..491,510,526..527,530..531,534,590,633,
                     636..637,654..655,661)
                     /site_type="active"
                     /db_xref="CDD:341056"
     CDS             1..693
                     /gene="ECEL1"
                     /coded_by="XM_041468002.1:1..2082"
                     /db_xref="GeneID:121353842"
ORIGIN      
        1 mektysltah ydefqevkyv skyqsgtlpn gfalqlgaga kkrrgglprw srrevcllsg
       61 lvfaaglcvi ltcmlvlkyl ategdsycle gcqekkaflr asrflsanmd atidpcqdfy
      121 sfacggwlrr hgipedklvy gtigaiaeqn eaklrallsr pvrrrarasa erkvkeffrs
      181 cldraeidrl gprpmlevig ecggwdappd rrdinellyk tqgvysaavl fsltvslder
      241 ntsryvirid qdgltlpert lylgqdeese klkwkrlldr ifhdnfseee evvllatdym
      301 hkvsnlirvt psrilhnyml wrivvvlseh lstpfrdaih elskemegne kqlepgkicl
      361 sqankhfgma lgalfveehf ssaskakvqq lvedikyild qrldeldwmd eetrraarak
      421 lrymmvmigy pdfllkpeai dkeyefevde ktyfknilns iafgirlsvk kirqevdkst
      481 wllppqalna yylpnknqmv fpagilqptl ydpefpqsln yggigtiigh elthgyddwg
      541 gqydrhgnlv hwwtersysk flkkaqcivn lydnftvynq rvngkhtlge niadmgglkl
      601 ayyayqkwvr ehgpehplhh mkythdqlff iafaqnwcik rrsqsiylqv ltdkhapehy
      661 rvlgsvsqfe efgrvfhcpk nspmnpvhkc svw
//
LOCUS       XP_041323937             367 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-1(III) chain-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323937
VERSION     XP_041323937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468003.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..367
                     /product="collagen alpha-1(III) chain-like"
                     /calculated_mol_wt=36595
     Region          <8..223
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..367
                     /gene="LOC121353843"
                     /coded_by="XM_041468003.1:1..1104"
                     /db_xref="GeneID:121353843"
ORIGIN      
        1 mghlchacav sehahtagie grgesgsfls ltpgprspaa grgarsppgr aprwrpggag
       61 gsgtgrggae esggtetgpg gqgtavgryp agsggpgsaa ppvllagsga pggsgtigrl
      121 rcpvaaahpg gsgvsapgtg eggsgrsqki prtspwtiqa plfpgghrgs tspgcpipap
      181 rlggpgglqc aatadpqrlp cpgapsrrwp rgsgpsrshq repkgrgwwr gwwpgwwpgw
      241 wrgrpgtpqp grrggtatpp sgsqtppell paatqpacvs lrepplpggc tpcqssppaq
      301 acagnlkldr sensgcgske gvprariial tsgfppgqai arhhvqtest vkhlcsdhfv
      361 vgvvsln
//
LOCUS       XP_041323938            1826 aa            linear   VRT 06-MAY-2021
DEFINITION  mucin-4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323938
VERSION     XP_041323938.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468004.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 29% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1826
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1826
                     /product="mucin-4-like"
                     /calculated_mol_wt=180015
     Region          <240..449
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          <373..789
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          639..>1081
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <1047..1431
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1296..>1463
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          1514..1670
                     /region_name="NIDO"
                     /note="Nidogen-like; cl02648"
                     /db_xref="CDD:470642"
     Region          1673..1794
                     /region_name="AMOP"
                     /note="AMOP domain; cl02758"
                     /db_xref="CDD:470667"
     CDS             1..1826
                     /gene="LOC121353844"
                     /coded_by="XM_041468004.1:1..5481"
                     /db_xref="GeneID:121353844"
ORIGIN      
        1 mttedewpha tersttaada etfppwtevd pvmatseysp svpalvngtk apnttqsteg
       61 hsatpnaatt aaaittqhpa vtpeavhdep qvtpdvplgt tpvledvked istdlstgtt
      121 slhttpalav twvpqptagv tvllsqgltt aegaveegvi lpediqseas akssgsspda
      181 gellptqqdg avggveginp epagemapag eesplasesg dpgdaingey stanssqlpp
      241 espvmsgtme npgkssllpg qalspdtslt psdggdgdgq gvpgmssdas gsalppaasr
      301 apvapeeaed tatslpapga padarsdtnl pvsatalpag dvgavdlasp slqpaprqtp
      361 tgeqplllpd sltsptdtps apgdahpape agastlpead gaaetpasad laagpeaavs
      421 pslhlepepa empqeadglg tgltsdsdap spapfepdgl arptagiqgq gaegvgdvaq
      481 aegsgdaspy edtqsdmspp alqpsvspad ngellnagte dlanselspp salgdgtgtg
      541 tggvpalgqv sspgpappnn agmesdlsgp egpgdlpses asapgavsps lgsvagpvse
      601 aetpvspdls aaqgapgsps fggsqpwgaa agapvgaglp gakgpdtdst lawdtpssav
      661 hepvgppspg lgeqlgtnvg lpaaegqgas taepavegag sgiesepsls stagsgaaag
      721 mdqvpsagsp sgitspsdva aapsvsrgde agpissaapg pdslspaspd gesgpglglv
      781 qgaesagdva qagnagsenp nkktspsaas pqqdltntge lpaeetgdma haelsppsal
      841 gdgtgtggap algqvslpgp appnnagmes dlsgpegpgd lpsesasapg avspslgsva
      901 gpvseaetpv spdlsaaqga pgspsfggsq pwgaaagapv gaglpgakgp dtdstlawdt
      961 pssavhepvg ppspglgeql gtnvglpaae gqgastaepa vegagsgies epslsstags
     1021 gaaagmdqvp sagspsgits psdvaaapsv srgdeagpis saapgpdsls paspdgesgp
     1081 glglvqgaes agdvaqagna gsenpnmets psavspqqge lpgtgsssgs aspsgdvaas
     1141 svsdpsslga lggadsaaeg lqpalgagtg ilpaagegas egagdvgstg qsqaptgmgp
     1201 agsesldgem gdvlqsasss sstdgssspg rtgeaadeag lpgaagaagg lntglqvagp
     1261 qeasesapgt qsgvntelsn gklsqvnvve vpggasvngg pspgaslvpv apdnsgvsrg
     1321 mttsvagsll lpgqgpssgl apsgdpdsap stqsgsspll pgspgglpee aggsqswsle
     1381 devasgmpap lggasphapm fpnaapvpps apqrgdsaeg vsaspglsal pavplygyga
     1441 rendqeyver rvdfnsplfk petgfpfgkt vrsslyftdn gqiifpasdn niltypsppp
     1501 sgfngheevp miavfwddad fsrgvgttfy qefstlntak ppfvrdveak vrqylrssys
     1561 avwtlkitwe rapvhaartd trktityqav lttdgfrsyv lmlyqdggmq wdytrltstn
     1621 vligytsgdg fyhnddltkr ppaakyrpdq frgyntdlrg lwiyklesrv ginyrlkcla
     1681 wtgqqqepra wsqglptcpc slqqgqqdpr fkssrggrwg arvsmlhsas pnqhgagvrc
     1741 lydsqsqlie grqerywrns rqaspyrdqe lklydwccnr agsahlcary sekrpkigcd
     1801 gyqapstdss eeaendsdeq tdgedk
//
LOCUS       XP_041323940             254 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-transporting protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323940
VERSION     XP_041323940.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468006.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="receptor-transporting protein 2"
                     /calculated_mol_wt=28939
     Region          61..152
                     /region_name="zf-3CxxC"
                     /note="Zinc-binding domain; pfam13695"
                     /db_xref="CDD:463958"
     CDS             1..254
                     /gene="RTP2"
                     /coded_by="XM_041468006.1:1..765"
                     /db_xref="GeneID:121353845"
ORIGIN      
        1 mrlwqdifav kigemhvtdp wtlleddalq vqacrpgwke fvqhralgrk qvfqqkgefg
       61 vhilfrmyhc qgwgtvwmri frqkcrrcpn srledpefsl dtvetilhnl vikilqyfyk
      121 kpvqpsdlle vvvdalvtgp hdrahceace lgicnrsqka paldawkplt denkarmhss
      181 kpwlawtsdv wksltnagea gthhteswss lgsddceplm veqvykelgg srastadqnw
      241 pkglctpqii llsg
//
LOCUS       XP_041323941             339 aa            linear   VRT 06-MAY-2021
DEFINITION  geminin coiled-coil domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323941
VERSION     XP_041323941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468007.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="geminin coiled-coil domain-containing protein 1"
                     /calculated_mol_wt=36655
     Region          72..129
                     /region_name="GemC1_CC"
                     /note="central coiled-coil domain of geminin coiled-coil
                     domain-containing protein 1; cd22588"
                     /db_xref="CDD:439142"
     Site            order(73..74,76..77,80..81,83..84,87..88,90..91,94..95,
                     97..98,101,105,108,111)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:439142"
     CDS             1..339
                     /gene="GMNC"
                     /coded_by="XM_041468007.1:1..1020"
                     /db_xref="GeneID:121353846"
ORIGIN      
        1 mvaatsagrp cpepdfagss gsacpwsapa gvsketwaav caaepphsqg rreaqppgqf
       61 ygpqlgaqda awpgdqlssq lyrnkqlqdt llqkeeelar lheennnlrq ylnsalikcl
      121 eekakkllsg hgqktcpilk sakrrlkedh ffvpqetpha skarrnlfne ftaceeqasp
      181 avdswvlqtl glkdvntide asanysalsp dlgkdtycls pggavdyehr egaaavfscs
      241 hvppasssth pcsedspflp qfpsapciss pvpsvssvpa yglpyltggl spnktevaft
      301 tslsphrnvr thsfhqgqaf vrrdddggwr ftwvpkqae
//
LOCUS       XP_041323942             492 aa            linear   VRT 06-MAY-2021
DEFINITION  protein MB21D2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323942
VERSION     XP_041323942.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468008.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="protein MB21D2"
                     /calculated_mol_wt=55781
     Region          115..299
                     /region_name="Mab-21"
                     /note="Mab-21 protein nucleotidyltransferase domain;
                     pfam03281"
                     /db_xref="CDD:460873"
     Region          <328..402
                     /region_name="Mab-21_C"
                     /note="Mab-21 protein HhH/H2TH-like domain; pfam20266"
                     /db_xref="CDD:466416"
     CDS             1..492
                     /gene="MB21D2"
                     /coded_by="XM_041468008.1:1..1479"
                     /db_xref="GeneID:121353847"
ORIGIN      
        1 mgemyedlas kagsagttsk ppfpeldfrs garveelnkl iqeftkhdqr eyddqralei
       61 htakdfifsm lgmvqkldqk lpvaneylll sggvregvvd idldelnvya rgtdydmdft
      121 llvpalklhd rnqpvtldmr hsalchswls lrlfdegtis kwkdcctivd hingatnyff
      181 sptkvadwfy esisivlsei qkkpqrgmpk vekvekngti isiilgvgss rmlydivpvv
      241 sfkgwpavaq swlmenhfwd gkiteeevis gfylvpacsy kgkkdnewrl sfarsevqlk
      301 kcissslmqa yqackaiiik llsrpkaisp yhlrsmmlwa cdrlpasyla qedyaahfll
      361 gliddlqhcl vnkmcpnyfi pqcnmlehls edtvmlhark lssvrsdpae hlrtaiehvk
      421 aanrltlelq rrgsttsips pqsdggdpnq pddrlakklq qlvtenpgks isvfinpddv
      481 trphfriddk ff
//
LOCUS       XP_041323943             531 aa            linear   VRT 06-MAY-2021
DEFINITION  prolyl 3-hydroxylase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323943
VERSION     XP_041323943.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468009.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..531
                     /product="prolyl 3-hydroxylase 2"
                     /calculated_mol_wt=60713
     Region          295..493
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..531
                     /gene="P3H2"
                     /coded_by="XM_041468009.1:257..1852"
                     /db_xref="GeneID:121353848"
ORIGIN      
        1 manpehmeiq qdlenyktts gkvslidqea rqhmedysag vrhydreeye laiefleral
       61 kgyysededc qvmcegpqrf eeheyldyka glyeaiadhy mqvlackhdc vrelatrsgr
      121 ispienflpl hydylqfayy rvgdyvkale caksyllfhp ddedvlenag yyegllegtv
      181 dpatikprke artllrrhkl eshllrvaaa glgyaytepn ywnrygarqd ehsvpssiss
      241 epedgprlsl tkkpmpkpdr elkeggplly sdvkfvynsq qlngtqrvll dnviseeqcr
      301 elhrvasgim lagdgyrgkt sphtpnerfe gatvlkalky gyegrvplks arlfydisek
      361 arrivqsyfl lnstlyfsyt hlvcrtalsg qqerrndlsh pihadnclld peanecwkep
      421 paytfrdysa llymnadfeg gefiftemda ktvtasitpk cgrmisfssg genphgvkav
      481 tkgqrcaval wftldplyre leriqadevi amldqehlgp semninpkde l
//
LOCUS       XP_041323944             246 aa            linear   VRT 06-MAY-2021
DEFINITION  protein C3orf33 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041323944
VERSION     XP_041323944.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468010.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="protein C3orf33 homolog"
                     /calculated_mol_wt=27474
     Region          104..213
                     /region_name="SNc"
                     /note="Staphylococcal nuclease homologues. SNase
                     homologues are found in bacteria, archaea, and eukaryotes.
                     They contain no disufide bonds; cl00140"
                     /db_xref="CDD:469627"
     CDS             1..246
                     /gene="CUNH3orf33"
                     /coded_by="XM_041468010.1:14..754"
                     /db_xref="GeneID:121353849"
ORIGIN      
        1 mpeqggggse raalalarls ewadahlgll rgliagaava gvlllarslr vttkftnpld
       61 ipvefvkknv klrgklhhit ekglevehip isvpfisaiq rkwqpeglll irlagvelaa
      121 ggtawlqrel lpkqplwfql lgrdssalec lvlvhkggff smclneells qglaravrie
      181 glphhsrlyl klhkrllrae lkavkknigi wkeqsyserv qerissnkfl qrlkrfvswv
      241 rsster
//
LOCUS       XP_041323945             949 aa            linear   VRT 06-MAY-2021
DEFINITION  chordin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323945
VERSION     XP_041323945.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468011.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..949
                     /product="chordin isoform X1"
                     /calculated_mol_wt=104054
     Region          51..117
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          165..278
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          285..402
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          408..523
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          541..656
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          698..755
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     Region          777..843
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          865..926
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     CDS             1..949
                     /gene="CHRD"
                     /coded_by="XM_041468011.1:256..3105"
                     /db_xref="GeneID:121353850"
ORIGIN      
        1 mraaalllla llplrplpgr aarpklalpi rpdtdplppg gaagcafggh fyaleetwhp
       61 dlgepfgvmh cvichceprn hrgkpvgkvn cknlkqdcpv pacpratllp ghcchtcpkg
      121 ppekspalrf dtleyfqdke ddldkpyndr sylsseglar ddartefval ltsgpepwhp
      181 tssavakarf tllrssllfs isyerlgrps rvrfsdpegn vlfehpvqks aapedgmlcg
      241 mwrtvskanv qllrgeqlrv slitraqpsg evhghilkhr alfaetfgai ltssnplhlg
      301 aggmamltls dtennlhfil margllepga restrvplrv rilhqgqtlr evranitved
      361 pdfaevlsdl saqelqwlvq gqlrivaete grharqlagt ittrrscdti qsvlcgadal
      421 lptktgavgs aklalhengt leyqvqvvgt ssevvgitle tkprrkskrn ilfdmtpsyk
      481 dglawgawqs psardahmll qnelflnvat kdwaegelrg qiislpysgl larytempva
      541 lagqlvsppv hsgagghawl sldehchlhy eisvaglgrp sdgtvsahih gvaelgemgt
      601 rphqhkrllk gfysteaqgv vkdldadllq hlaqgtaflq vstkahpnge mrgrvhipnq
      661 chaggtrlap geslgqaels estktrdleq lkkdpnscff egqhrahgtr wapdydkkcs
      721 icscqkrtvi cdpilcqpln cthqvhpedl ccpiceekkt eqeelklera rdssegcyfd
      781 gdktwrgsgt rwhpvvppfg likcaictck gttgevhcek vqcprltcan pvraspsdcc
      841 kqcpapeksv peladsmqad apracrfgrr wylnneswhp svppfgemkc ilcwcvsget
      901 hcqrqecpps acaspatrdn pccakcrald apsdarekvh dakvesrsh
//
LOCUS       XP_041323946             950 aa            linear   VRT 06-MAY-2021
DEFINITION  chordin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323946
VERSION     XP_041323946.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468012.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..950
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..950
                     /product="chordin isoform X2"
                     /calculated_mol_wt=104182
     Region          51..118
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          166..279
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          286..403
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          409..524
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          542..657
                     /region_name="CHRD"
                     /note="A domain in the BMP inhibitor chordin and in
                     microbial proteins; smart00754"
                     /db_xref="CDD:214804"
     Region          699..756
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     Region          778..844
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          866..927
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; pfam00093"
                     /db_xref="CDD:278520"
     CDS             1..950
                     /gene="CHRD"
                     /coded_by="XM_041468012.1:342..3194"
                     /db_xref="GeneID:121353850"
ORIGIN      
        1 mraaalllla llplrplpgr aarpklalpi rpdtdplppg gaagcafggh fyaleetwhp
       61 dlgepfgvmh cvichcepqr nhrgkpvgkv ncknlkqdcp vpacpratll pghcchtcpk
      121 gppekspalr fdtleyfqdk eddldkpynd rsylssegla rddartefva lltsgpepwh
      181 ptssavakar ftllrssllf sisyerlgrp srvrfsdpeg nvlfehpvqk saapedgmlc
      241 gmwrtvskan vqllrgeqlr vslitraqps gevhghilkh ralfaetfga iltssnplhl
      301 gaggmamltl sdtennlhfi lmargllepg arestrvplr vrilhqgqtl revranitve
      361 dpdfaevlsd lsaqelqwlv qgqlrivaet egrharqlag tittrrscdt iqsvlcgada
      421 llptktgavg saklalheng tleyqvqvvg tssevvgitl etkprrkskr nilfdmtpsy
      481 kdglawgawq spsardahml lqnelflnva tkdwaegelr gqiislpysg llarytempv
      541 alagqlvspp vhsgagghaw lsldehchlh yeisvaglgr psdgtvsahi hgvaelgemg
      601 trphqhkrll kgfysteaqg vvkdldadll qhlaqgtafl qvstkahpng emrgrvhipn
      661 qchaggtrla pgeslgqael sestktrdle qlkkdpnscf fegqhrahgt rwapdydkkc
      721 sicscqkrtv icdpilcqpl ncthqvhped lccpiceekk teqeelkler ardssegcyf
      781 dgdktwrgsg trwhpvvppf glikcaictc kgttgevhce kvqcprltca npvraspsdc
      841 ckqcpapeks vpeladsmqa dapracrfgr rwylnneswh psvppfgemk cilcwcvsge
      901 thcqrqecpp sacaspatrd npccakcral dapsdarekv hdakvesrsh
//
LOCUS       XP_041323948             266 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit beta-2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323948
VERSION     XP_041323948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="calcium-activated potassium channel subunit
                     beta-2 isoform X1"
                     /calculated_mol_wt=30682
     Region          33..63
                     /region_name="KcnmB2_inactiv"
                     /note="KCNMB2, ball and chain domain; pfam09303"
                     /db_xref="CDD:401299"
     Region          69..260
                     /region_name="CaKB"
                     /note="Calcium-activated potassium channel, beta subunit;
                     pfam03185"
                     /db_xref="CDD:460838"
     CDS             1..266
                     /gene="LOC121353851"
                     /coded_by="XM_041468014.1:52..852"
                     /db_xref="GeneID:121353851"
ORIGIN      
        1 mslclkyprd kwrsfhrpta asrantgqps kmfiwtsgrg stsyrhdekr niyqkirdhd
       61 lldkrktvta lkagedrail lglammvcsi mmyfllgitl lrsymqsvwt eetqcsllna
      121 sitetfncsf ncgpecwkis qypclqvyvn ltssgqklll yhteetmkin secsyipkcg
      181 knyeesmslv nvvmenfrky qrfscfydpe gvqknviltk lyssnvlfhs lfwptcmmig
      241 gvaivamvkl tqylsllcer iqrisr
//
LOCUS       XP_041323949             252 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit beta-2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323949
VERSION     XP_041323949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468015.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..252
                     /product="calcium-activated potassium channel subunit
                     beta-2 isoform X2"
                     /calculated_mol_wt=28806
     Region          <28..49
                     /region_name="KcnmB2_inactiv"
                     /note="KCNMB2, ball and chain domain; pfam09303"
                     /db_xref="CDD:401299"
     Region          55..246
                     /region_name="CaKB"
                     /note="Calcium-activated potassium channel, beta subunit;
                     pfam03185"
                     /db_xref="CDD:460838"
     CDS             1..252
                     /gene="LOC121353851"
                     /coded_by="XM_041468015.1:716..1474"
                     /db_xref="GeneID:121353851"
ORIGIN      
        1 mvvpglrgvr ftcfgccldd skeplqkaqe iltslrniyq kirdhdlldk rktvtalkag
       61 edraillgla mmvcsimmyf llgitllrsy mqsvwteetq csllnasite tfncsfncgp
      121 ecwkisqypc lqvyvnltss gqklllyhte etmkinsecs yipkcgknye esmslvnvvm
      181 enfrkyqrfs cfydpegvqk nviltklyss nvlfhslfwp tcmmiggvai vamvkltqyl
      241 sllceriqri sr
//
LOCUS       XP_041323950             235 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit beta-2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323950
VERSION     XP_041323950.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468016.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..235
                     /product="calcium-activated potassium channel subunit
                     beta-2 isoform X3"
                     /calculated_mol_wt=27109
     Region          2..32
                     /region_name="KcnmB2_inactiv"
                     /note="KCNMB2, ball and chain domain; pfam09303"
                     /db_xref="CDD:401299"
     Region          38..229
                     /region_name="CaKB"
                     /note="Calcium-activated potassium channel, beta subunit;
                     pfam03185"
                     /db_xref="CDD:460838"
     CDS             1..235
                     /gene="LOC121353851"
                     /coded_by="XM_041468016.1:614..1321"
                     /db_xref="GeneID:121353851"
ORIGIN      
        1 mfiwtsgrgs tsyrhdekrn iyqkirdhdl ldkrktvtal kagedraill glammvcsim
       61 myfllgitll rsymqsvwte etqcsllnas itetfncsfn cgpecwkisq ypclqvyvnl
      121 tssgqkllly hteetmkins ecsyipkcgk nyeesmslvn vvmenfrkyq rfscfydpeg
      181 vqknviltkl yssnvlfhsl fwptcmmigg vaivamvklt qylsllceri qrisr
//
LOCUS       XP_041323951             229 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit beta-2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323951
VERSION     XP_041323951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="calcium-activated potassium channel subunit
                     beta-2 isoform X4"
                     /calculated_mol_wt=26490
     Region          <8..26
                     /region_name="KcnmB2_inactiv"
                     /note="KCNMB2, ball and chain domain; pfam09303"
                     /db_xref="CDD:401299"
     Region          32..223
                     /region_name="CaKB"
                     /note="Calcium-activated potassium channel, beta subunit;
                     pfam03185"
                     /db_xref="CDD:460838"
     CDS             1..229
                     /gene="LOC121353851"
                     /coded_by="XM_041468017.1:16..705"
                     /db_xref="GeneID:121353851"
ORIGIN      
        1 mslclkyprd kwrniyqkir dhdlldkrkt vtalkagedr aillglammv csimmyfllg
       61 itllrsymqs vwteetqcsl lnasitetfn csfncgpecw kisqypclqv yvnltssgqk
      121 lllyhteetm kinsecsyip kcgknyeesm slvnvvmenf rkyqrfscfy dpegvqknvi
      181 ltklyssnvl fhslfwptcm miggvaivam vkltqylsll ceriqrisr
//
LOCUS       XP_041323952             222 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-activated potassium channel subunit beta-2 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323952
VERSION     XP_041323952.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468018.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="calcium-activated potassium channel subunit
                     beta-2 isoform X5"
                     /calculated_mol_wt=25574
     Region          25..216
                     /region_name="CaKB"
                     /note="Calcium-activated potassium channel, beta subunit;
                     pfam03185"
                     /db_xref="CDD:460838"
     CDS             1..222
                     /gene="LOC121353851"
                     /coded_by="XM_041468018.1:15..683"
                     /db_xref="GeneID:121353851"
ORIGIN      
        1 mslclkyprd kwrdhdlldk rktvtalkag edraillgla mmvcsimmyf llgitllrsy
       61 mqsvwteetq csllnasite tfncsfncgp ecwkisqypc lqvyvnltss gqklllyhte
      121 etmkinsecs yipkcgknye esmslvnvvm enfrkyqrfs cfydpegvqk nviltklyss
      181 nvlfhslfwp tcmmiggvai vamvkltqyl sllceriqri sr
//
LOCUS       XP_041323953             374 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353852 [Pyrgilauda ruficollis].
ACCESSION   XP_041323953
VERSION     XP_041323953.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468019.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="uncharacterized protein LOC121353852"
                     /calculated_mol_wt=40241
     Region          <4..>133
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          149..353
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(211,250,266,268)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..374
                     /gene="LOC121353852"
                     /coded_by="XM_041468019.1:227..1351"
                     /db_xref="GeneID:121353852"
ORIGIN      
        1 mgrprkesag tssprpataa skiapaappp stsasrakaa aagsqsrsts aakaatptqg
       61 rgtkadsaqp rstasrgarg dagdksraps rssttqkapd akgaaspaga dlypqkkqpg
      121 adlskacdqi lppvkgqdip kveretrgqr enpkwykwre nritasvapk ianskfansk
      181 tdevpksylk evvgsgskvq tpamswgirn ekvaveaykq ksqregktvq vedcglfihp
      241 eknwlaaspd giikdpatgk dlgllevkcp ykhrnrtvre ackdkdfcld vdgdsyvlkk
      301 nhpyftqvqc qlgttglqra dfvvhtnket avvpvefdse fwgktvpkle kfyteaviph
      361 leqkagssvw akee
//
LOCUS       XP_041323954             374 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353852 [Pyrgilauda ruficollis].
ACCESSION   XP_041323954
VERSION     XP_041323954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468020.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="uncharacterized protein LOC121353852"
                     /calculated_mol_wt=40241
     Region          <4..>133
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          149..353
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(211,250,266,268)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..374
                     /gene="LOC121353852"
                     /coded_by="XM_041468020.1:299..1423"
                     /db_xref="GeneID:121353852"
ORIGIN      
        1 mgrprkesag tssprpataa skiapaappp stsasrakaa aagsqsrsts aakaatptqg
       61 rgtkadsaqp rstasrgarg dagdksraps rssttqkapd akgaaspaga dlypqkkqpg
      121 adlskacdqi lppvkgqdip kveretrgqr enpkwykwre nritasvapk ianskfansk
      181 tdevpksylk evvgsgskvq tpamswgirn ekvaveaykq ksqregktvq vedcglfihp
      241 eknwlaaspd giikdpatgk dlgllevkcp ykhrnrtvre ackdkdfcld vdgdsyvlkk
      301 nhpyftqvqc qlgttglqra dfvvhtnket avvpvefdse fwgktvpkle kfyteaviph
      361 leqkagssvw akee
//
LOCUS       XP_041323955             374 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353852 [Pyrgilauda ruficollis].
ACCESSION   XP_041323955
VERSION     XP_041323955.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468021.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="uncharacterized protein LOC121353852"
                     /calculated_mol_wt=40241
     Region          <4..>133
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          149..353
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(211,250,266,268)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..374
                     /gene="LOC121353852"
                     /coded_by="XM_041468021.1:325..1449"
                     /db_xref="GeneID:121353852"
ORIGIN      
        1 mgrprkesag tssprpataa skiapaappp stsasrakaa aagsqsrsts aakaatptqg
       61 rgtkadsaqp rstasrgarg dagdksraps rssttqkapd akgaaspaga dlypqkkqpg
      121 adlskacdqi lppvkgqdip kveretrgqr enpkwykwre nritasvapk ianskfansk
      181 tdevpksylk evvgsgskvq tpamswgirn ekvaveaykq ksqregktvq vedcglfihp
      241 eknwlaaspd giikdpatgk dlgllevkcp ykhrnrtvre ackdkdfcld vdgdsyvlkk
      301 nhpyftqvqc qlgttglqra dfvvhtnket avvpvefdse fwgktvpkle kfyteaviph
      361 leqkagssvw akee
//
LOCUS       XP_041323956             374 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353852 [Pyrgilauda ruficollis].
ACCESSION   XP_041323956
VERSION     XP_041323956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="uncharacterized protein LOC121353852"
                     /calculated_mol_wt=40241
     Region          <4..>133
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          149..353
                     /region_name="PDDEXK_lambda_exonuclease-like"
                     /note="Uncharacterized nucleases similar to lambda phage
                     exonuclease; cd22343"
                     /db_xref="CDD:411747"
     Site            order(211,250,266,268)
                     /site_type="active"
                     /db_xref="CDD:411747"
     CDS             1..374
                     /gene="LOC121353852"
                     /coded_by="XM_041468022.1:150..1274"
                     /db_xref="GeneID:121353852"
ORIGIN      
        1 mgrprkesag tssprpataa skiapaappp stsasrakaa aagsqsrsts aakaatptqg
       61 rgtkadsaqp rstasrgarg dagdksraps rssttqkapd akgaaspaga dlypqkkqpg
      121 adlskacdqi lppvkgqdip kveretrgqr enpkwykwre nritasvapk ianskfansk
      181 tdevpksylk evvgsgskvq tpamswgirn ekvaveaykq ksqregktvq vedcglfihp
      241 eknwlaaspd giikdpatgk dlgllevkcp ykhrnrtvre ackdkdfcld vdgdsyvlkk
      301 nhpyftqvqc qlgttglqra dfvvhtnket avvpvefdse fwgktvpkle kfyteaviph
      361 leqkagssvw akee
//
LOCUS       XP_041323958             606 aa            linear   VRT 06-MAY-2021
DEFINITION  cholinesterase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323958
VERSION     XP_041323958.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468024.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..606
                     /product="cholinesterase isoform X1"
                     /calculated_mol_wt=68022
     Region          35..555
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(148..150,230..232,235,386,390..391,426,472,475)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(231,358,471)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     Region          570..604
                     /region_name="AChE_tetra"
                     /note="Acetylcholinesterase tetramerization domain;
                     pfam08674"
                     /db_xref="CDD:430146"
     CDS             1..606
                     /gene="BCHE"
                     /coded_by="XM_041468024.1:16..1836"
                     /db_xref="GeneID:121353853"
ORIGIN      
        1 meqrimiwtn glslfagflm gflllsvftg kvvpeeniia tkkgkvrgts lqvlggtvta
       61 flgipygqpp igklrfqkpe prekwadvwd atkhanscyq pidttypgfa gsemwnpktn
      121 lsedclylnv wipspkpkna tvmvwiyggg fesgstslpv ydgkflarve rvvvvsmnyr
      181 tgalgflslp gnqkapgnag lfdqrlalqw vqeniaafgg npksvtlfge sagsasvtyh
      241 llspeshplf trailesgsa napwaaitss earnravala kqlqcptsne selifclqek
      301 dpkeivenei favpygsllq iyfcpsvdgd fltdmpevlm englfketqi lvgvnkdegl
      361 sfltygapgl dkdsdglink tqfeaaltla fprasklaie siifhytdwe nlgkpehyrd
      421 aiddvigdyq iicpvvefst sfaqlghhvf fyffehrssk lpwpewmgvm hgyeiefvfg
      481 lplerrvnyt kaeellsrsm mrhwatfakt gapngtltng ikwpvftstd qkyltlntnt
      541 sevltklraq qcrfwkhffp kvmemtgnid eaerewkagf hrwnnymsdw knqfndytsk
      601 kelcsl
//
LOCUS       XP_041323959             601 aa            linear   VRT 06-MAY-2021
DEFINITION  cholinesterase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323959
VERSION     XP_041323959.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468025.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="cholinesterase isoform X2"
                     /calculated_mol_wt=67364
     Region          30..550
                     /region_name="COesterase"
                     /note="Carboxylesterase family; pfam00135"
                     /db_xref="CDD:395084"
     Site            order(143..145,225..227,230,381,385..386,421,467,470)
                     /site_type="other"
                     /note="substrate binding pocket [chemical binding]"
                     /db_xref="CDD:238191"
     Site            order(226,353,466)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238191"
     Region          565..599
                     /region_name="AChE_tetra"
                     /note="Acetylcholinesterase tetramerization domain;
                     pfam08674"
                     /db_xref="CDD:430146"
     CDS             1..601
                     /gene="BCHE"
                     /coded_by="XM_041468025.1:28..1833"
                     /db_xref="GeneID:121353853"
ORIGIN      
        1 miwtnglslf agflmgflll svftgkvvpe eniiatkkgk vrgtslqvlg gtvtaflgip
       61 ygqppigklr fqkpeprekw advwdatkha nscyqpidtt ypgfagsemw npktnlsedc
      121 lylnvwipsp kpknatvmvw iygggfesgs tslpvydgkf larvervvvv smnyrtgalg
      181 flslpgnqka pgnaglfdqr lalqwvqeni aafggnpksv tlfgesagsa svtyhllspe
      241 shplftrail esgsanapwa aitssearnr avalakqlqc ptsneselif clqekdpkei
      301 veneifavpy gsllqiyfcp svdgdfltdm pevlmenglf ketqilvgvn kdeglsflty
      361 gapgldkdsd glinktqfea altlafpras klaiesiifh ytdwenlgkp ehyrdaiddv
      421 igdyqiicpv vefstsfaql ghhvffyffe hrssklpwpe wmgvmhgyei efvfglpler
      481 rvnytkaeel lsrsmmrhwa tfaktgapng tltngikwpv ftstdqkylt lntntsevlt
      541 klraqqcrfw khffpkvmem tgnideaere wkagfhrwnn ymsdwknqfn dytskkelcs
      601 l
//
LOCUS       XP_041323960             199 aa            linear   VRT 06-MAY-2021
DEFINITION  COMM domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323960
VERSION     XP_041323960.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468026.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..199
                     /product="COMM domain-containing protein 2"
                     /calculated_mol_wt=22194
     Region          26..190
                     /region_name="Commd2"
                     /note="COMM_Domain containing protein 2. The COMM Domain
                     is found at the C-terminus of a variety of proteins;
                     presumably all COMM_Domain containing proteins are located
                     in the nucleus and the COMM domain plays a role in
                     protein-protein interactions. Several...; cd04750"
                     /db_xref="CDD:240098"
     CDS             1..199
                     /gene="COMMD2"
                     /coded_by="XM_041468026.1:35..634"
                     /db_xref="GeneID:121353854"
ORIGIN      
        1 mllvlsaehr ahlgclprag gaavgelgrl aleqlrrgaa pracesaark lnisvdiiqh
       61 gveglayllt essklmisev dfqdsihvlg fsdelnksll qlyldnrkei rsilgelapr
      121 lpsyhslewr ldvqlasrsl rqqikpavtm klhlnqnedq taqvlqtdpa tllhliqqle
      181 qalgemkmnh crrivrnmk
//
LOCUS       XP_041323961             672 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-10 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323961
VERSION     XP_041323961.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468027.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..672
                     /product="calpain-10 isoform X1"
                     /calculated_mol_wt=75602
     Region          14..304
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(74,239,264)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     Region          338..496
                     /region_name="calpain_III"
                     /note="calpain_III domain; smart00720"
                     /db_xref="CDD:214786"
     Region          514..653
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cd00214"
                     /db_xref="CDD:238132"
     Site            order(551..553,557)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     CDS             1..672
                     /gene="CAPN10"
                     /coded_by="XM_041468027.1:135..2153"
                     /db_xref="GeneID:121353855"
ORIGIN      
        1 mlgekkqlmv ardlytdpaf pasdtsiffn yctplaqfrg eiswlrpkdi cssprlfsnn
       61 lqdvqvkqgi lgdcwflcac valqkskyll nkvippgqps wtdesyqgcf tcrvwqfghw
      121 vevtiddrlp clggklcfsq cqtedlfwlp llekayakvh gsyeqlwagq vadalvdltg
      181 giaerwtlkd pgknvekgkt gmvlekavfr rlmnlkeqcv iscsvlnsrq gaselgefha
      241 fividtlnls evsgkeifll rirnpwgrrc wkgpwceggq gwnqldpvva sqllsqiqeg
      301 efwvdeeeff refdeitvgf pvneegqlqs lytervlyhs qnlfgswvrg qsaggcrnns
      361 sfptnpkfwl rvcessevci allqkhrkys tdwagriqnp trlaeenpsl tegiqgknyq
      421 avglhvwkve kkrfnlpktl sappvvgtvc hsydrevhvc cdlspgfylv vpstflkdav
      481 gnfllrvfss grislselkp ppmdaalcee lpagewetvq lhgcwkngln aggsrnfpsf
      541 htnpcfplsi pagpekssvk vtlrqhclds kccpigfhif qvpnsswkpq ttsfvhlepl
      601 vscvphcysq evsrlcrlpa gsyviipsty lpntegnftv viatkidrkr ihsqetlgqv
      661 lqevsfttvm kr
//
LOCUS       XP_041323962             672 aa            linear   VRT 06-MAY-2021
DEFINITION  calpain-10 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323962
VERSION     XP_041323962.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468028.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..672
                     /product="calpain-10 isoform X2"
                     /calculated_mol_wt=75602
     Region          14..304
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cd00044"
                     /db_xref="CDD:238004"
     Site            order(74,239,264)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:238004"
     Region          338..496
                     /region_name="calpain_III"
                     /note="calpain_III domain; smart00720"
                     /db_xref="CDD:214786"
     Region          514..653
                     /region_name="Calpain_III"
                     /note="Calpain, subdomain III. Calpains are
                     calcium-activated cytoplasmic cysteine proteinases,
                     participate in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction.
                     Catalytic domain and the two calmodulin-like domains
                     are...; cd00214"
                     /db_xref="CDD:238132"
     Site            order(551..553,557)
                     /site_type="other"
                     /note="acidic loop"
                     /db_xref="CDD:238132"
     CDS             1..672
                     /gene="CAPN10"
                     /coded_by="XM_041468028.1:232..2250"
                     /db_xref="GeneID:121353855"
ORIGIN      
        1 mlgekkqlmv ardlytdpaf pasdtsiffn yctplaqfrg eiswlrpkdi cssprlfsnn
       61 lqdvqvkqgi lgdcwflcac valqkskyll nkvippgqps wtdesyqgcf tcrvwqfghw
      121 vevtiddrlp clggklcfsq cqtedlfwlp llekayakvh gsyeqlwagq vadalvdltg
      181 giaerwtlkd pgknvekgkt gmvlekavfr rlmnlkeqcv iscsvlnsrq gaselgefha
      241 fividtlnls evsgkeifll rirnpwgrrc wkgpwceggq gwnqldpvva sqllsqiqeg
      301 efwvdeeeff refdeitvgf pvneegqlqs lytervlyhs qnlfgswvrg qsaggcrnns
      361 sfptnpkfwl rvcessevci allqkhrkys tdwagriqnp trlaeenpsl tegiqgknyq
      421 avglhvwkve kkrfnlpktl sappvvgtvc hsydrevhvc cdlspgfylv vpstflkdav
      481 gnfllrvfss grislselkp ppmdaalcee lpagewetvq lhgcwkngln aggsrnfpsf
      541 htnpcfplsi pagpekssvk vtlrqhclds kccpigfhif qvpnsswkpq ttsfvhlepl
      601 vscvphcysq evsrlcrlpa gsyviipsty lpntegnftv viatkidrkr ihsqetlgqv
      661 lqevsfttvm kr
//
LOCUS       XP_041323963             500 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 13-like [Pyrgilauda ruficollis].
ACCESSION   XP_041323963
VERSION     XP_041323963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468029.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..500
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..500
                     /product="PHD finger protein 13-like"
                     /calculated_mol_wt=53319
     Region          432..478
                     /region_name="PHD_PHF13"
                     /note="PHD finger found in PHD finger protein 13 (PHF13);
                     cd15632"
                     /db_xref="CDD:277102"
     Site            order(441,443..448,455,465,468..470)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:277102"
     CDS             1..500
                     /gene="LOC121353856"
                     /coded_by="XM_041468029.1:153..1655"
                     /db_xref="GeneID:121353856"
ORIGIN      
        1 mpqpwsrsrp srtehsggvg parprragtv rtrcssrapt fheprpgagg grclgvavgs
       61 gggsgrvqpg ctpvfgtgrg ghspapprtg tagarprprl prhqvvpplr pgrrsslapt
      121 ggghrtgtat gtgtatgtat gtgmsaggqp aepcprggpc sagsspvpsp aspapeeplq
      181 krrrtvedfn qfctfvlaya gyipypeeyv pwthggsmsp qnstgstqds dsstsshssd
      241 ghipmdnrks rnavargavg sgllmnspaf stafynvrpq qikrkkppak krileqevkk
      301 kvplsawkdf gveqdgvkql aalagqlspv keellepsln ppgdpqpnsl leepvteekd
      361 lmygaqgtek paddpqlkeh dsfsgerksp spcntldqst gedtsretsq lsavefaevp
      421 ntkaedddaw dlitcfcmkp fagrpmiecn ecatwihlsc akirksnvpd ificqrcrda
      481 kqeirrsnra rtvprkrlvd
//
LOCUS       XP_041323964             356 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: programmed cell death protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323964
VERSION     XP_041323964.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468030.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="LOW QUALITY PROTEIN: programmed cell death
                     protein 1"
                     /calculated_mol_wt=39097
     Region          113..221
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          127..131
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..148
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          182..186
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          196..201
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          213..216
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..356
                     /gene="PDCD1"
                     /coded_by="XM_041468030.1:1..1071"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121353857"
ORIGIN      
        1 mwqvpnkpph twleclvspf gdikpqggka sllpccvpqr tscrcgegst eragsgtaxh
       61 stapplpgqg txrlsmapga skkswgsvev alvdlcaill ccgpmltccr hvtifpavlt
      121 lpegdkatff cnismendsg seyslnwyke tnhsqaqkta eirnkpmtet ekyrlinhts
      181 vfeieilnlh qndsgsyycg litfydpdkv mesnrsqliv taapqvnatd epemeegnps
      241 ehikamllgi lllagvvvll ifgyltftyr kgdvqkppse nmpvkeekpp vvfistvdyg
      301 vlefqrdqrs pvppktqpve qteyatiifp eekpvtperg kkhldertrq lpsqpc
//
LOCUS       XP_041323966             514 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase recruitment domain-containing protein 8 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323966
VERSION     XP_041323966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..514
                     /product="caspase recruitment domain-containing protein 8
                     isoform X1"
                     /calculated_mol_wt=56812
     Region          125..374
                     /region_name="FIIND"
                     /note="Function to find; pfam13553"
                     /db_xref="CDD:463919"
     Region          422..507
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..514
                     /gene="CARD8"
                     /coded_by="XM_041468032.1:38..1582"
                     /db_xref="GeneID:121353858"
ORIGIN      
        1 msgpppepds gaeslssdek elaraelnps pafapclsla evtpnglegs sgsteehpeg
       61 eassedssss sseeesdeeq eekesppycn esgescllpc ehcrnendqt eqvtprrlag
      121 gqfmaqldae gsyrcsstgl ifevtaaarv tysllswsky aalvekpwiv ggplfdvrcs
      181 apgallsiqf phclclgghg agvafkvlhi kgggaaieps aefsashvkw lvsslspvgp
      241 lihsheplqy hgavilykai dehpslsfcv ylatnndsfi kdiskavkhs kkkfvqiekp
      301 pvcqkllqeg kkyrlicepe aeitpeeief vdgsllklks yfevylekpd dftlslveqd
      361 sdetvwkakl rerdwihydq nrneqkrstg svkrrkpaln ileeeglhsk kqktgstadg
      421 mgaksltdqq llviaklldr hwremaiecl qmemkdiddi rameedvtmq kllvlrkwre
      481 reqgrgtaea lqrslgekat yeilqalqgf laqs
//
LOCUS       XP_041323967             503 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase recruitment domain-containing protein 8 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323967
VERSION     XP_041323967.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468033.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="caspase recruitment domain-containing protein 8
                     isoform X2"
                     /calculated_mol_wt=55634
     Region          114..363
                     /region_name="FIIND"
                     /note="Function to find; pfam13553"
                     /db_xref="CDD:463919"
     Region          411..496
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..503
                     /gene="CARD8"
                     /coded_by="XM_041468033.1:38..1549"
                     /db_xref="GeneID:121353858"
ORIGIN      
        1 msgpppepds gaeslssdek afapclslae vtpnglegss gsteehpege assedsssss
       61 seeesdeeqe ekesppycne sgescllpce hcrnendqte qvtprrlagg qfmaqldaeg
      121 syrcsstgli fevtaaarvt ysllswskya alvekpwivg gplfdvrcsa pgallsiqfp
      181 hclclgghga gvafkvlhik gggaaiepsa efsashvkwl vsslspvgpl ihsheplqyh
      241 gavilykaid ehpslsfcvy latnndsfik diskavkhsk kkfvqiekpp vcqkllqegk
      301 kyrlicepea eitpeeiefv dgsllklksy fevylekpdd ftlslveqds detvwkaklr
      361 erdwihydqn rneqkrstgs vkrrkpalni leeeglhskk qktgstadgm gaksltdqql
      421 lviaklldrh wremaieclq memkdiddir ameedvtmqk llvlrkwrer eqgrgtaeal
      481 qrslgekaty eilqalqgfl aqs
//
LOCUS       XP_041323968             494 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase recruitment domain-containing protein 8 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323968
VERSION     XP_041323968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468034.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="caspase recruitment domain-containing protein 8
                     isoform X3"
                     /calculated_mol_wt=54760
     Region          105..354
                     /region_name="FIIND"
                     /note="Function to find; pfam13553"
                     /db_xref="CDD:463919"
     Region          402..487
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..494
                     /gene="CARD8"
                     /coded_by="XM_041468034.1:38..1522"
                     /db_xref="GeneID:121353858"
ORIGIN      
        1 msgpppepds gaeslssdek evtpnglegs sgsteehpeg eassedssss sseeesdeeq
       61 eekesppycn esgescllpc ehcrnendqt eqvtprrlag gqfmaqldae gsyrcsstgl
      121 ifevtaaarv tysllswsky aalvekpwiv ggplfdvrcs apgallsiqf phclclgghg
      181 agvafkvlhi kgggaaieps aefsashvkw lvsslspvgp lihsheplqy hgavilykai
      241 dehpslsfcv ylatnndsfi kdiskavkhs kkkfvqiekp pvcqkllqeg kkyrlicepe
      301 aeitpeeief vdgsllklks yfevylekpd dftlslveqd sdetvwkakl rerdwihydq
      361 nrneqkrstg svkrrkpaln ileeeglhsk kqktgstadg mgaksltdqq llviaklldr
      421 hwremaiecl qmemkdiddi rameedvtmq kllvlrkwre reqgrgtaea lqrslgekat
      481 yeilqalqgf laqs
//
LOCUS       XP_041323969             634 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger B-box domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323969
VERSION     XP_041323969.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468035.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..634
                     /product="zinc finger B-box domain-containing protein 1"
                     /calculated_mol_wt=69691
     CDS             1..634
                     /gene="ZBBX"
                     /coded_by="XM_041468035.1:1..1905"
                     /db_xref="GeneID:121353859"
ORIGIN      
        1 mnvndfvilp gskagtsvrl ktktvkelql ekaqletenk emerrllqlq snmsrekeer
       61 rklgayhwks gqagprtpqp rvvapntenr kkvppqkvkl qvlkhvqepv kkpvkpergn
      121 vvaheklgvk gmayrppeik sgllepasts acaspgkqdk glllsgafde kasaksfqea
      181 llqwrkgesd pgrdpcasev pseavgncev qtnvsalkep ihvefqkdgl symeklllkk
      241 yrrtpvdqff ascmkdsgpv qalsvqqaga ggggqgdddd ddieeltdee vkkywasiyr
      301 aeesntvsen aesslkiefl ddsqsedsee ssdstleetg dvgmnkqgkt dplefgrnpv
      361 spkeifqekl ivcsgleina vqeesiepka grrslsscei pgeisdptee vskdligael
      421 essrdlleae lqesrrepqe lgrvsnsqsv vspvttkssa lqdvakrqkc gsasyqgleg
      481 ffvvganpkq ekleapssla aassprdrki pfpgdeqwvs erslseyadd svvqgvlesq
      541 lnkaanafqa qnqlshlmaa wmpwpgresn snlacedgts ssramekise nadlqntldl
      601 khhdtfdifg dweesqmdae eailedkqqv lalq
//
LOCUS       XP_041323970             778 aa            linear   VRT 06-MAY-2021
DEFINITION  intraflagellar transport protein 80 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323970
VERSION     XP_041323970.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468036.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..778
                     /product="intraflagellar transport protein 80 homolog
                     isoform X1"
                     /calculated_mol_wt=87345
     Region          <13..293
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          17..55
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..143
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          151..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..226
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          272..295
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..778
                     /gene="IFT80"
                     /coded_by="XM_041468036.1:213..2549"
                     /db_xref="GeneID:121353860"
ORIGIN      
        1 mrlktsllke pkhkdlvscv gwttadelys cgddhqimkw npvtsettrv lklpddvypi
       61 dlhwfprgig gkkqsqaenf vltssdgkfh lisklgrvek sveahcgavl agrwnyegta
      121 lvtvgedgqv kiwsktgmlr stlaqqgtpv ysvswapdsd kvlytsgqql iikplqpnak
      181 vlqwkahdgl ilktdwnsvn dlilsagedc rykvwdsfgr vlynsqphey pitaiawald
      241 gelfavgsfn tlrlcdktgw syalekpstg sifaiawsid gtqlagacgn gqvifahvve
      301 qhwewqnfqi tlikrrtmkv hnvindavdl lefrdrvika slnygylvvs tslqcyvfst
      361 rnwntplifd lkegtvslil qaerhfllvd ggglylysye grlisspkyp gmrtdilnal
      421 tvslsndtla vrdkadekvi yifealsgkp lgdgkplthk teiveialdq kgltserkia
      481 fidknrdlfi tsvkrfgkeq kivkigtmvq slawndscni lcgiqdsrft vwyypntvyv
      541 dkdllpktly ekdaselsks pqivsfvgsq vtirradgsl vhlhvspypa ilhghvsssr
      601 wqdglrlcrf vkdqtlwacl aamavankdm staeiayaai geidkvqyin sikelpskes
      661 rlahmllfsg nsqeaetlll qaglvyqaiq ininlynwer aldlavkhrt hvdtvlayrq
      721 kfledfgkke tnqrflqyae glevdwnkik akiemeiake reraaasaag rssvtvqq
//
LOCUS       XP_041323971             778 aa            linear   VRT 06-MAY-2021
DEFINITION  intraflagellar transport protein 80 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323971
VERSION     XP_041323971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..778
                     /product="intraflagellar transport protein 80 homolog
                     isoform X1"
                     /calculated_mol_wt=87345
     Region          <13..293
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          17..55
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..143
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          151..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..226
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          272..295
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..778
                     /gene="IFT80"
                     /coded_by="XM_041468037.1:183..2519"
                     /db_xref="GeneID:121353860"
ORIGIN      
        1 mrlktsllke pkhkdlvscv gwttadelys cgddhqimkw npvtsettrv lklpddvypi
       61 dlhwfprgig gkkqsqaenf vltssdgkfh lisklgrvek sveahcgavl agrwnyegta
      121 lvtvgedgqv kiwsktgmlr stlaqqgtpv ysvswapdsd kvlytsgqql iikplqpnak
      181 vlqwkahdgl ilktdwnsvn dlilsagedc rykvwdsfgr vlynsqphey pitaiawald
      241 gelfavgsfn tlrlcdktgw syalekpstg sifaiawsid gtqlagacgn gqvifahvve
      301 qhwewqnfqi tlikrrtmkv hnvindavdl lefrdrvika slnygylvvs tslqcyvfst
      361 rnwntplifd lkegtvslil qaerhfllvd ggglylysye grlisspkyp gmrtdilnal
      421 tvslsndtla vrdkadekvi yifealsgkp lgdgkplthk teiveialdq kgltserkia
      481 fidknrdlfi tsvkrfgkeq kivkigtmvq slawndscni lcgiqdsrft vwyypntvyv
      541 dkdllpktly ekdaselsks pqivsfvgsq vtirradgsl vhlhvspypa ilhghvsssr
      601 wqdglrlcrf vkdqtlwacl aamavankdm staeiayaai geidkvqyin sikelpskes
      661 rlahmllfsg nsqeaetlll qaglvyqaiq ininlynwer aldlavkhrt hvdtvlayrq
      721 kfledfgkke tnqrflqyae glevdwnkik akiemeiake reraaasaag rssvtvqq
//
LOCUS       XP_041323972             778 aa            linear   VRT 06-MAY-2021
DEFINITION  intraflagellar transport protein 80 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323972
VERSION     XP_041323972.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468038.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..778
                     /product="intraflagellar transport protein 80 homolog
                     isoform X1"
                     /calculated_mol_wt=87345
     Region          <13..293
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          17..55
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..143
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          151..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..226
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          272..295
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..778
                     /gene="IFT80"
                     /coded_by="XM_041468038.1:103..2439"
                     /db_xref="GeneID:121353860"
ORIGIN      
        1 mrlktsllke pkhkdlvscv gwttadelys cgddhqimkw npvtsettrv lklpddvypi
       61 dlhwfprgig gkkqsqaenf vltssdgkfh lisklgrvek sveahcgavl agrwnyegta
      121 lvtvgedgqv kiwsktgmlr stlaqqgtpv ysvswapdsd kvlytsgqql iikplqpnak
      181 vlqwkahdgl ilktdwnsvn dlilsagedc rykvwdsfgr vlynsqphey pitaiawald
      241 gelfavgsfn tlrlcdktgw syalekpstg sifaiawsid gtqlagacgn gqvifahvve
      301 qhwewqnfqi tlikrrtmkv hnvindavdl lefrdrvika slnygylvvs tslqcyvfst
      361 rnwntplifd lkegtvslil qaerhfllvd ggglylysye grlisspkyp gmrtdilnal
      421 tvslsndtla vrdkadekvi yifealsgkp lgdgkplthk teiveialdq kgltserkia
      481 fidknrdlfi tsvkrfgkeq kivkigtmvq slawndscni lcgiqdsrft vwyypntvyv
      541 dkdllpktly ekdaselsks pqivsfvgsq vtirradgsl vhlhvspypa ilhghvsssr
      601 wqdglrlcrf vkdqtlwacl aamavankdm staeiayaai geidkvqyin sikelpskes
      661 rlahmllfsg nsqeaetlll qaglvyqaiq ininlynwer aldlavkhrt hvdtvlayrq
      721 kfledfgkke tnqrflqyae glevdwnkik akiemeiake reraaasaag rssvtvqq
//
LOCUS       XP_041323973             689 aa            linear   VRT 06-MAY-2021
DEFINITION  intraflagellar transport protein 80 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323973
VERSION     XP_041323973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..689
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..689
                     /product="intraflagellar transport protein 80 homolog
                     isoform X2"
                     /calculated_mol_wt=76739
     Region          <13..293
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          17..55
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..143
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          151..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..226
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          232..265
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          272..295
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..689
                     /gene="IFT80"
                     /coded_by="XM_041468039.1:213..2282"
                     /db_xref="GeneID:121353860"
ORIGIN      
        1 mrlktsllke pkhkdlvscv gwttadelys cgddhqimkw npvtsettrv lklpddvypi
       61 dlhwfprgig gkkqsqaenf vltssdgkfh lisklgrvek sveahcgavl agrwnyegta
      121 lvtvgedgqv kiwsktgmlr stlaqqgtpv ysvswapdsd kvlytsgqql iikplqpnak
      181 vlqwkahdgl ilktdwnsvn dlilsagedc rykvwdsfgr vlynsqphey pitaiawald
      241 gelfavgsfn tlrlcdktgw syalekpstg sifaiawsid gtqlagacgn gqvifahvve
      301 qhwewqnfqi tlikrrtmkv hnvindavdl lefrdrvika slnygylvvs tslqcyvfst
      361 rnwntplifd lkegtvslil qaerhfllvd ggglylysye grlisspkyp gmrtdilnal
      421 tvslsndtla vrdkadekvi yifealsgkp lgdgkplthk teiveialdq kgltserkia
      481 fidknrdlfi tsvkrfgkeq kivkigtmvq slawndscni lcgiqdsrft vwyypntvyv
      541 dkdllpktly ekdaselsks pqivsfvgsq vtirradgsl vhlhvspypa ilhghvsssr
      601 wqdglrlcrf vkdqtlwacl aamavankdm staeiayaai gespgsgsea qdtrghspgl
      661 qteilggfwe krnqpkvfav crrsgsgle
//
LOCUS       XP_041323975             341 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 12 [Pyrgilauda ruficollis].
ACCESSION   XP_041323975
VERSION     XP_041323975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="P2Y purinoceptor 12"
                     /calculated_mol_wt=39082
     Region          27..311
                     /region_name="7tmA_P2Y12"
                     /note="P2Y purinoceptor 12, member of the class A family
                     of seven-transmembrane G protein-coupled receptors;
                     cd15150"
                     /db_xref="CDD:341326"
     Region          27..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341326"
     Region          60..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341326"
     Site            order(94,98,102..103,106..107,110,153,156..157,160,164,
                     175..176,180,188,191..192,195,257,260,264,281)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:341326"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341326"
     Region          140..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341326"
     Region          187..216
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341326"
     Region          236..264
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341326"
     Region          277..301
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341326"
     CDS             1..341
                     /gene="P2RY12"
                     /coded_by="XM_041468041.1:848..1873"
                     /db_xref="GeneID:121353861"
ORIGIN      
        1 mqmkatihfs sfrndsncts dsrisqvifp llytflflvg ttmnglamwv ffkissksnf
       61 iiflkntvis dflmiltfpf kilsdaklvs wvlrgfvcqv tqvvfyftmy isilflglit
      121 idryqkatsp frtstprsll aakilstaiw vsmfalslpn milnnkkktp knvrkcallk
      181 sefglvwhei vnyicqlifw vslavivvcy ilisrelyks ykrtrctgka skktvnfkvf
      241 iiiavfficf vpfhftripy tlsqtrdvfd csarntlfyl kettlwltsl nacldpfiyf
      301 flcksfrksl ldmlckhrag aglgaqakgq negddtdetp l
//
LOCUS       XP_041323976             341 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 12 [Pyrgilauda ruficollis].
ACCESSION   XP_041323976
VERSION     XP_041323976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="P2Y purinoceptor 12"
                     /calculated_mol_wt=39082
     Region          27..311
                     /region_name="7tmA_P2Y12"
                     /note="P2Y purinoceptor 12, member of the class A family
                     of seven-transmembrane G protein-coupled receptors;
                     cd15150"
                     /db_xref="CDD:341326"
     Region          27..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:341326"
     Region          60..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:341326"
     Site            order(94,98,102..103,106..107,110,153,156..157,160,164,
                     175..176,180,188,191..192,195,257,260,264,281)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:341326"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:341326"
     Region          140..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:341326"
     Region          187..216
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:341326"
     Region          236..264
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:341326"
     Region          277..301
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:341326"
     CDS             1..341
                     /gene="P2RY12"
                     /coded_by="XM_041468042.1:122..1147"
                     /db_xref="GeneID:121353861"
ORIGIN      
        1 mqmkatihfs sfrndsncts dsrisqvifp llytflflvg ttmnglamwv ffkissksnf
       61 iiflkntvis dflmiltfpf kilsdaklvs wvlrgfvcqv tqvvfyftmy isilflglit
      121 idryqkatsp frtstprsll aakilstaiw vsmfalslpn milnnkkktp knvrkcallk
      181 sefglvwhei vnyicqlifw vslavivvcy ilisrelyks ykrtrctgka skktvnfkvf
      241 iiiavfficf vpfhftripy tlsqtrdvfd csarntlfyl kettlwltsl nacldpfiyf
      301 flcksfrksl ldmlckhrag aglgaqakgq negddtdetp l
//
LOCUS       XP_041323977             432 aa            linear   VRT 06-MAY-2021
DEFINITION  dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
            [Pyrgilauda ruficollis].
ACCESSION   XP_041323977
VERSION     XP_041323977.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468043.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="dol-P-Man:Man(5)GlcNAc(2)-PP-Dol
                     alpha-1,3-mannosyltransferase"
                     /calculated_mol_wt=49024
     Region          34..391
                     /region_name="ALG3"
                     /note="ALG3 protein; pfam05208"
                     /db_xref="CDD:461587"
     CDS             1..432
                     /gene="ALG3"
                     /coded_by="XM_041468043.1:22..1320"
                     /db_xref="GeneID:121353862"
ORIGIN      
        1 maagrgaaal rrawrerraa lleprytplv aaclclaegg vnlwvirrvp yteidwkaym
       61 qevegfangt ldytqlrgdt gplvypagfv yiflglyhat grgsdirlaq ylfaglylln
      121 lllvfriycr tnkvppyvff fmccasyrih sifvlrlfnd pvamailfla inlfleerws
      181 wgcllfslav svkmnvllfa pgllflllqr fgllgcipkl cicallqvvl glpfllvnpv
      241 gyltrsfdlg rqfqfkwtvn wrflpeevfq srvfhaalll ahlaglglfa lhrwhssken
      301 iltllkdpak rkpasprltv nrivfilfss nflgvccsrs lhyqfyvwyf htlpyllwct
      361 pttklahmpk vlllgvielc wntypstvcs slslhvchgl illqlwygta ptpvshtppq
      421 srkstavskk aq
//
LOCUS       XP_041323978             337 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041323978
VERSION     XP_041323978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="P2Y purinoceptor 14"
                     /calculated_mol_wt=38231
     Region          23..305
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          24..48
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          56..77
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          94..116
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          139..155
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          183..206
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          231..253
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..337
                     /gene="P2RY14"
                     /coded_by="XM_041468044.1:222..1235"
                     /db_xref="GeneID:121353863"
ORIGIN      
        1 mlnsstnssg stcshstvvt ttvipllycl iflaglslna laawvflhvs stksfivylk
       61 niavadllms ltfpfkilad selapaelsl fvcrysavvf ymnmyigitf fgligfdryy
      121 kivkplftsf vhtvsyskav saviwlllmi vsfpnmiltn eiandsyskk ciglkselgr
      181 qwhkattyic tgifwivffl livfytsisk kifssykkfr rssdmakrkt srniftimfv
      241 fvvcfvpyhl crtpytlsqt ssqftcqsqk slyyakeftl vlsaanvcld piiyfflclp
      301 freklyqklh lklkasseve isksrrsntl gesiniv
//
LOCUS       XP_041323979             337 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041323979
VERSION     XP_041323979.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468045.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="P2Y purinoceptor 14"
                     /calculated_mol_wt=38231
     Region          23..305
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          24..48
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          56..77
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          94..116
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          139..155
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          183..206
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          231..253
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..337
                     /gene="P2RY14"
                     /coded_by="XM_041468045.1:113..1126"
                     /db_xref="GeneID:121353863"
ORIGIN      
        1 mlnsstnssg stcshstvvt ttvipllycl iflaglslna laawvflhvs stksfivylk
       61 niavadllms ltfpfkilad selapaelsl fvcrysavvf ymnmyigitf fgligfdryy
      121 kivkplftsf vhtvsyskav saviwlllmi vsfpnmiltn eiandsyskk ciglkselgr
      181 qwhkattyic tgifwivffl livfytsisk kifssykkfr rssdmakrkt srniftimfv
      241 fvvcfvpyhl crtpytlsqt ssqftcqsqk slyyakeftl vlsaanvcld piiyfflclp
      301 freklyqklh lklkasseve isksrrsntl gesiniv
//
LOCUS       XP_041323980             571 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041323980
VERSION     XP_041323980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..571
                     /product="sentrin-specific protease 5 isoform X1"
                     /calculated_mol_wt=65499
     Region          <4..386
                     /region_name="SENP3_5_N"
                     /note="Sentrin-specific protease 3/5 N-terminal;
                     pfam19722"
                     /db_xref="CDD:466160"
     Region          397..567
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     pfam02902"
                     /db_xref="CDD:397169"
     CDS             1..571
                     /gene="SENP5"
                     /coded_by="XM_041468046.1:1050..2765"
                     /db_xref="GeneID:121353864"
ORIGIN      
        1 mllqrewngt cgpltalkrs kfnhhtvkkr flfmmhkkls mvrfryriik fpklrargkt
       61 cklrkikrrw vqkvtrdhqe tlqqdfeggl cnlfsswksk skrlwkrysl sdmnnntpks
      121 lgaeneicap eichtqdvsa epcsedpeag gqggsvdavp pelhvraspe aetlrqvean
      181 galaedhcsd ivisvtgkei aasdrdgaes kdvvgvdgmt llqsslqdsd vsdnfangpl
      241 smeltqneds ssqmevegsl nldifsskll dhpycksple epspestglk sgtrkggkrn
      301 sqktsrvade qlatwlcgfl devmkkygsl vplcekdvmg rlkevfnedf shrkpfitre
      361 imkyrekhpk tstcnfrvfy nkhmldmddl atlegqnwln dqiinmygel vmdavpekvh
      421 ffnsffhrql vtkgyngvkr wtkkvdlfkk tlllipihle vhwslitvni psriisfyds
      481 qgihfkfcve nirkylltea keknrpeflq gwqtavtkci pqqkndsdcg vfvlqyckcl
      541 aldqpfqfsq edmprvrkri ykelcerqli d
//
LOCUS       XP_041323981             248 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323981
VERSION     XP_041323981.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468047.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="sentrin-specific protease 5 isoform X2"
                     /calculated_mol_wt=29486
     Region          <1..63
                     /region_name="SENP3_5_N"
                     /note="Sentrin-specific protease 3/5 N-terminal;
                     pfam19722"
                     /db_xref="CDD:466160"
     Region          74..244
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     pfam02902"
                     /db_xref="CDD:397169"
     CDS             1..248
                     /gene="SENP5"
                     /coded_by="XM_041468047.1:697..1443"
                     /db_xref="GeneID:121353864"
ORIGIN      
        1 mkkygslvpl cekdvmgrlk evfnedfshr kpfitreimk yrekhpktst cnfrvfynkh
       61 mldmddlatl egqnwlndqi inmygelvmd avpekvhffn sffhrqlvtk gyngvkrwtk
      121 kvdlfkktll lipihlevhw slitvnipsr iisfydsqgi hfkfcvenir kyllteakek
      181 nrpeflqgwq tavtkcipqq kndsdcgvfv lqyckclald qpfqfsqedm prvrkriyke
      241 lcerqlid
//
LOCUS       XP_041323982             248 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041323982
VERSION     XP_041323982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="sentrin-specific protease 5 isoform X2"
                     /calculated_mol_wt=29486
     Region          <1..63
                     /region_name="SENP3_5_N"
                     /note="Sentrin-specific protease 3/5 N-terminal;
                     pfam19722"
                     /db_xref="CDD:466160"
     Region          74..244
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     pfam02902"
                     /db_xref="CDD:397169"
     CDS             1..248
                     /gene="SENP5"
                     /coded_by="XM_041468048.1:154..900"
                     /db_xref="GeneID:121353864"
ORIGIN      
        1 mkkygslvpl cekdvmgrlk evfnedfshr kpfitreimk yrekhpktst cnfrvfynkh
       61 mldmddlatl egqnwlndqi inmygelvmd avpekvhffn sffhrqlvtk gyngvkrwtk
      121 kvdlfkktll lipihlevhw slitvnipsr iisfydsqgi hfkfcvenir kyllteakek
      181 nrpeflqgwq tavtkcipqq kndsdcgvfv lqyckclald qpfqfsqedm prvrkriyke
      241 lcerqlid
//
LOCUS       XP_041323984             200 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombopoietin [Pyrgilauda ruficollis].
ACCESSION   XP_041323984
VERSION     XP_041323984.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468050.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="thrombopoietin"
                     /calculated_mol_wt=22556
     Region          34..176
                     /region_name="EPO_TPO"
                     /note="Erythropoietin/thrombopoietin; pfam00758"
                     /db_xref="CDD:459927"
     CDS             1..200
                     /gene="THPO"
                     /coded_by="XM_041468050.1:758..1360"
                     /db_xref="GeneID:121353865"
ORIGIN      
        1 mqgrspqpsm elnrllllts fllhvkedra sptrlvcdnr liqkyiveak dmekrvgqcq
       61 alptlrcpav lplvdftfqq wksksnetkr reilcdlall vgaaagaqgq vsdecgarql
      121 sqlyrhansf flllqtfswe aghwepscsp hsteqthiss ifltyrqlvq gklrfffydl
      181 akvlckqgqe gsrdppcgaq
//
LOCUS       XP_041323985             155 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 207 [Pyrgilauda ruficollis].
ACCESSION   XP_041323985
VERSION     XP_041323985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468051.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="transmembrane protein 207"
                     /calculated_mol_wt=16523
     CDS             1..155
                     /gene="TMEM207"
                     /coded_by="XM_041468051.1:1..468"
                     /db_xref="GeneID:121353867"
ORIGIN      
        1 mfltlmmqrp galclsswit agtgvlcltf fqsadsgsdc elgdrcvgqs dgnfsiwyvw
       61 flvlfllavl lscgiccclq cwlkrrscrp rrtvavfals ssdafcatea ppcpssgsls
      121 pcmtaeipss papcislggt elppsyedvv kenkv
//
LOCUS       XP_041323987             543 aa            linear   VRT 06-MAY-2021
DEFINITION  sterile alpha motif domain-containing protein 7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323987
VERSION     XP_041323987.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468053.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..543
                     /product="sterile alpha motif domain-containing protein 7"
                     /calculated_mol_wt=60027
     Region          393..460
                     /region_name="SAM_Samd7,11"
                     /note="SAM domain of Samd7,11 subfamily of Polycomb group;
                     cd09579"
                     /db_xref="CDD:188978"
     Site            order(422..424,426..427,430..431,434..435,440)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188978"
     Site            order(443..446,448..449,452,455)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188978"
     CDS             1..543
                     /gene="SAMD7"
                     /coded_by="XM_041468053.1:1..1632"
                     /db_xref="GeneID:121353868"
ORIGIN      
        1 mtprehmrkm smlgeqgsle ekhlyrlagg maagelrqrq emlmrnqlma vnpqlmgpgq
       61 qrmqaipaqf eprlvdrdll pstemmasad prqihiashl gptvpqhpnm pnllsnrvyp
      121 gpgysflqqe smeavarrqe lvqkqniarm ememsaifqq kemekahrkg llgleapfly
      181 hgmpaspiaf rgrhrlpegh handlyvhrt tldeihgntm lmasspyppv ttlqrergrr
      241 pgrragnhkt aegsangtkn qaddkstdsa saamedeked kkeveveapn kheqsknqte
      301 paavakncke feqglrknca theiptetts csntnekean sscaafddky lypsaipfsa
      361 lpygfpvpnn pllppgahgl ilngedlssv edirkwtvdd vhnfivslpg csdyaqifkd
      421 haidgetlpl lteehlldtm glklgpalki rsqvsrrlgn vfymmnvpls vplppapgkp
      481 seqpsdmasp lhcnssgdtl dspcsqdpet sqaveqmvse srenpcdtag sqadfqmiaf
      541 qks
//
LOCUS       XP_041323988            1475 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323988
VERSION     XP_041323988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468054.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1475
                     /product="multidrug resistance-associated protein 5
                     isoform X1"
                     /calculated_mol_wt=165460
     Region          100..1424
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1475
                     /gene="ABCC5"
                     /coded_by="XM_041468054.1:181..4608"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mkdidigkey iipspgyrsv reradsvhee qeesnfphsk lkqiecqdal eaaaraeglp
       61 ldisvhsqlr mldeehhkgk yhhglnalkp irttskhqhp vdnaglfssm tfswltplah
      121 raykkgelfm ddvwslsrhe ssdvncrrle rlwqeelken gpddaslrrv vwifcrtrli
      181 lsivclmitq lagfsgpafv vkhlleytqq sesnlqyslf lvfgifmtev vrswslaltw
      241 alnyrtgvrl rgavltmafk kilklknike kslgelinvc sndgqrmfea aavgsllagg
      301 pivailgmvy nviilgptgf lgsavfilfy pammfvsrlt ayfrrkcvat tdervqkmne
      361 vlnyikfikm yawvkpfsqn vqkireeerk ileragyfqs itvgvapivv viasvvtfsv
      421 hmilgydlta aqaftvvtvf nsmtfalkvt pfsvkslsea svsvdrfksl flmeevhmik
      481 kkpanphtai evknatlawd fshasvqssp kltpkvkkdk kvtkskkekm klqnegqqav
      541 laeqkghllv dsddhhspee ehkiihlvsl rlqrtlynid leiekgklvg icgsvgsgkt
      601 slisailgqm tllegsiavs gtfayvaqqa wilnatlrdn ilfgkeydee ryntvlngcc
      661 lrpdlailpn gdlteigerg anlsggqrqr islaralysd rdiyilddpl saldahvgnh
      721 ifnsairkhl ksktvlfith qlqylvdcde vifmkegcit ergsheelmn lngdyatifn
      781 slqlgdtphi einikkntnn slkrpqdkst ktgsvkkekv vkkeeegqlv qleekgkgsv
      841 pwsvygvyiq aaggpfafli imalfvlnvg stafsnwwls fwikqgsgnt tvtlgnetvi
      901 snsmkdnphm hyyagiyals mavmlilkav rgvvfvkgtl rassrlhdel frrilrspmk
      961 ffdttptgri lnrfskdmde vdvrlpfqae mfiqnvilvf fcvgvisgvf pwflvavgpl
     1021 ivlftvlhvv srvfirelkr ldnitqspfl shitssiqgl stihayhkgq eflhryqell
     1081 ddnqapfylf scamrwlavr ldiisialit ttglmivlmh gqippayagl aisyavqltg
     1141 lfqftvrlas etearftsve ridhyiktls leapariknk tppldwpqeg evvfenaemr
     1201 yrenlplvlk kvsftikpke kigivgrtgs gksslgmalf rlvelsggci kidgvkindi
     1261 gladlrskls iipqepvlfs gtvrsnldpf nqyseeqiwa alerthmkec vaqlpmklds
     1321 evmengenfs vgerqllcia rallrrckil ildeataamd tetdlliqet ireafadctm
     1381 ltiahrlhtv lgcdrimvlt qgqvvefdtp tallanensr fyamfaaaen kagtssslpd
     1441 assgscvvqf rklscrkqec ctkeetgrhn pqegr
//
LOCUS       XP_041323989            1474 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323989
VERSION     XP_041323989.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468055.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1474
                     /product="multidrug resistance-associated protein 5
                     isoform X2"
                     /calculated_mol_wt=165331
     Region          99..1423
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1474
                     /gene="ABCC5"
                     /coded_by="XM_041468055.1:180..4604"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mkdidigkey iipspgyrsv reradsvhee qeesnfphsk lkiecqdale aaaraeglpl
       61 disvhsqlrm ldeehhkgky hhglnalkpi rttskhqhpv dnaglfssmt fswltplahr
      121 aykkgelfmd dvwslsrhes sdvncrrler lwqeelkeng pddaslrrvv wifcrtrlil
      181 sivclmitql agfsgpafvv khlleytqqs esnlqyslfl vfgifmtevv rswslaltwa
      241 lnyrtgvrlr gavltmafkk ilklknikek slgelinvcs ndgqrmfeaa avgsllaggp
      301 ivailgmvyn viilgptgfl gsavfilfyp ammfvsrlta yfrrkcvatt dervqkmnev
      361 lnyikfikmy awvkpfsqnv qkireeerki leragyfqsi tvgvapivvv iasvvtfsvh
      421 milgydltaa qaftvvtvfn smtfalkvtp fsvkslseas vsvdrfkslf lmeevhmikk
      481 kpanphtaie vknatlawdf shasvqsspk ltpkvkkdkk vtkskkekmk lqnegqqavl
      541 aeqkghllvd sddhhspeee hkiihlvslr lqrtlynidl eiekgklvgi cgsvgsgkts
      601 lisailgqmt llegsiavsg tfayvaqqaw ilnatlrdni lfgkeydeer yntvlngccl
      661 rpdlailpng dlteigerga nlsggqrqri slaralysdr diyilddpls aldahvgnhi
      721 fnsairkhlk sktvlfithq lqylvdcdev ifmkegcite rgsheelmnl ngdyatifns
      781 lqlgdtphie inikkntnns lkrpqdkstk tgsvkkekvv kkeeegqlvq leekgkgsvp
      841 wsvygvyiqa aggpfaflii malfvlnvgs tafsnwwlsf wikqgsgntt vtlgnetvis
      901 nsmkdnphmh yyagiyalsm avmlilkavr gvvfvkgtlr assrlhdelf rrilrspmkf
      961 fdttptgril nrfskdmdev dvrlpfqaem fiqnvilvff cvgvisgvfp wflvavgpli
     1021 vlftvlhvvs rvfirelkrl dnitqspfls hitssiqgls tihayhkgqe flhryqelld
     1081 dnqapfylfs camrwlavrl diisialitt tglmivlmhg qippayagla isyavqltgl
     1141 fqftvrlase tearftsver idhyiktlsl eapariknkt ppldwpqege vvfenaemry
     1201 renlplvlkk vsftikpkek igivgrtgsg ksslgmalfr lvelsggcik idgvkindig
     1261 ladlrsklsi ipqepvlfsg tvrsnldpfn qyseeqiwaa lerthmkecv aqlpmkldse
     1321 vmengenfsv gerqllciar allrrckili ldeataamdt etdlliqeti reafadctml
     1381 tiahrlhtvl gcdrimvltq gqvvefdtpt allanensrf yamfaaaenk agtssslpda
     1441 ssgscvvqfr klscrkqecc tkeetgrhnp qegr
//
LOCUS       XP_041323990            1474 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323990
VERSION     XP_041323990.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468056.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1474
                     /product="multidrug resistance-associated protein 5
                     isoform X2"
                     /calculated_mol_wt=165331
     Region          99..1423
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1474
                     /gene="ABCC5"
                     /coded_by="XM_041468056.1:162..4586"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mkdidigkey iipspgyrsv reradsvhee qeesnfphsk lkiecqdale aaaraeglpl
       61 disvhsqlrm ldeehhkgky hhglnalkpi rttskhqhpv dnaglfssmt fswltplahr
      121 aykkgelfmd dvwslsrhes sdvncrrler lwqeelkeng pddaslrrvv wifcrtrlil
      181 sivclmitql agfsgpafvv khlleytqqs esnlqyslfl vfgifmtevv rswslaltwa
      241 lnyrtgvrlr gavltmafkk ilklknikek slgelinvcs ndgqrmfeaa avgsllaggp
      301 ivailgmvyn viilgptgfl gsavfilfyp ammfvsrlta yfrrkcvatt dervqkmnev
      361 lnyikfikmy awvkpfsqnv qkireeerki leragyfqsi tvgvapivvv iasvvtfsvh
      421 milgydltaa qaftvvtvfn smtfalkvtp fsvkslseas vsvdrfkslf lmeevhmikk
      481 kpanphtaie vknatlawdf shasvqsspk ltpkvkkdkk vtkskkekmk lqnegqqavl
      541 aeqkghllvd sddhhspeee hkiihlvslr lqrtlynidl eiekgklvgi cgsvgsgkts
      601 lisailgqmt llegsiavsg tfayvaqqaw ilnatlrdni lfgkeydeer yntvlngccl
      661 rpdlailpng dlteigerga nlsggqrqri slaralysdr diyilddpls aldahvgnhi
      721 fnsairkhlk sktvlfithq lqylvdcdev ifmkegcite rgsheelmnl ngdyatifns
      781 lqlgdtphie inikkntnns lkrpqdkstk tgsvkkekvv kkeeegqlvq leekgkgsvp
      841 wsvygvyiqa aggpfaflii malfvlnvgs tafsnwwlsf wikqgsgntt vtlgnetvis
      901 nsmkdnphmh yyagiyalsm avmlilkavr gvvfvkgtlr assrlhdelf rrilrspmkf
      961 fdttptgril nrfskdmdev dvrlpfqaem fiqnvilvff cvgvisgvfp wflvavgpli
     1021 vlftvlhvvs rvfirelkrl dnitqspfls hitssiqgls tihayhkgqe flhryqelld
     1081 dnqapfylfs camrwlavrl diisialitt tglmivlmhg qippayagla isyavqltgl
     1141 fqftvrlase tearftsver idhyiktlsl eapariknkt ppldwpqege vvfenaemry
     1201 renlplvlkk vsftikpkek igivgrtgsg ksslgmalfr lvelsggcik idgvkindig
     1261 ladlrsklsi ipqepvlfsg tvrsnldpfn qyseeqiwaa lerthmkecv aqlpmkldse
     1321 vmengenfsv gerqllciar allrrckili ldeataamdt etdlliqeti reafadctml
     1381 tiahrlhtvl gcdrimvltq gqvvefdtpt allanensrf yamfaaaenk agtssslpda
     1441 ssgscvvqfr klscrkqecc tkeetgrhnp qegr
//
LOCUS       XP_041323992            1394 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323992
VERSION     XP_041323992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1394
                     /product="multidrug resistance-associated protein 5
                     isoform X3"
                     /calculated_mol_wt=156360
     Region          19..1343
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1394
                     /gene="ABCC5"
                     /coded_by="XM_041468058.1:125..4309"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mksrkslifh ilnlrhqhpv dnaglfssmt fswltplahr aykkgelfmd dvwslsrhes
       61 sdvncrrler lwqeelkeng pddaslrrvv wifcrtrlil sivclmitql agfsgpafvv
      121 khlleytqqs esnlqyslfl vfgifmtevv rswslaltwa lnyrtgvrlr gavltmafkk
      181 ilklknikek slgelinvcs ndgqrmfeaa avgsllaggp ivailgmvyn viilgptgfl
      241 gsavfilfyp ammfvsrlta yfrrkcvatt dervqkmnev lnyikfikmy awvkpfsqnv
      301 qkireeerki leragyfqsi tvgvapivvv iasvvtfsvh milgydltaa qaftvvtvfn
      361 smtfalkvtp fsvkslseas vsvdrfkslf lmeevhmikk kpanphtaie vknatlawdf
      421 shasvqsspk ltpkvkkdkk vtkskkekmk lqnegqqavl aeqkghllvd sddhhspeee
      481 hkiihlvslr lqrtlynidl eiekgklvgi cgsvgsgkts lisailgqmt llegsiavsg
      541 tfayvaqqaw ilnatlrdni lfgkeydeer yntvlngccl rpdlailpng dlteigerga
      601 nlsggqrqri slaralysdr diyilddpls aldahvgnhi fnsairkhlk sktvlfithq
      661 lqylvdcdev ifmkegcite rgsheelmnl ngdyatifns lqlgdtphie inikkntnns
      721 lkrpqdkstk tgsvkkekvv kkeeegqlvq leekgkgsvp wsvygvyiqa aggpfaflii
      781 malfvlnvgs tafsnwwlsf wikqgsgntt vtlgnetvis nsmkdnphmh yyagiyalsm
      841 avmlilkavr gvvfvkgtlr assrlhdelf rrilrspmkf fdttptgril nrfskdmdev
      901 dvrlpfqaem fiqnvilvff cvgvisgvfp wflvavgpli vlftvlhvvs rvfirelkrl
      961 dnitqspfls hitssiqgls tihayhkgqe flhryqelld dnqapfylfs camrwlavrl
     1021 diisialitt tglmivlmhg qippayagla isyavqltgl fqftvrlase tearftsver
     1081 idhyiktlsl eapariknkt ppldwpqege vvfenaemry renlplvlkk vsftikpkek
     1141 igivgrtgsg ksslgmalfr lvelsggcik idgvkindig ladlrsklsi ipqepvlfsg
     1201 tvrsnldpfn qyseeqiwaa lerthmkecv aqlpmkldse vmengenfsv gerqllciar
     1261 allrrckili ldeataamdt etdlliqeti reafadctml tiahrlhtvl gcdrimvltq
     1321 gqvvefdtpt allanensrf yamfaaaenk agtssslpda ssgscvvqfr klscrkqecc
     1381 tkeetgrhnp qegr
//
LOCUS       XP_041323993            1299 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323993
VERSION     XP_041323993.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468059.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1299
                     /product="multidrug resistance-associated protein 5
                     isoform X4"
                     /calculated_mol_wt=145278
     Region          23..1248
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1299
                     /gene="ABCC5"
                     /coded_by="XM_041468059.1:2180..6079"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mavfcvrmrl scwpepppra kafvvkhlle ytqqsesnlq yslflvfgif mtevvrswsl
       61 altwalnyrt gvrlrgavlt mafkkilklk nikekslgel invcsndgqr mfeaaavgsl
      121 laggpivail gmvynviilg ptgflgsavf ilfypammfv srltayfrrk cvattdervq
      181 kmnevlnyik fikmyawvkp fsqnvqkire eerkilerag yfqsitvgva pivvviasvv
      241 tfsvhmilgy dltaaqaftv vtvfnsmtfa lkvtpfsvks lseasvsvdr fkslflmeev
      301 hmikkkpanp htaievknat lawdfshasv qsspkltpkv kkdkkvtksk kekmklqneg
      361 qqavlaeqkg hllvdsddhh speeehkiih lvslrlqrtl ynidleiekg klvgicgsvg
      421 sgktslisai lgqmtllegs iavsgtfayv aqqawilnat lrdnilfgke ydeeryntvl
      481 ngcclrpdla ilpngdltei gerganlsgg qrqrislara lysdrdiyil ddplsaldah
      541 vgnhifnsai rkhlksktvl fithqlqylv dcdevifmke gcitergshe elmnlngdya
      601 tifnslqlgd tphieinikk ntnnslkrpq dkstktgsvk kekvvkkeee gqlvqleekg
      661 kgsvpwsvyg vyiqaaggpf afliimalfv lnvgstafsn wwlsfwikqg sgnttvtlgn
      721 etvisnsmkd nphmhyyagi yalsmavmli lkavrgvvfv kgtlrassrl hdelfrrilr
      781 spmkffdttp tgrilnrfsk dmdevdvrlp fqaemfiqnv ilvffcvgvi sgvfpwflva
      841 vgplivlftv lhvvsrvfir elkrldnitq spflshitss iqglstihay hkgqeflhry
      901 qellddnqap fylfscamrw lavrldiisi alitttglmi vlmhgqippa yaglaisyav
      961 qltglfqftv rlasetearf tsveridhyi ktlsleapar iknktppldw pqegevvfen
     1021 aemryrenlp lvlkkvsfti kpkekigivg rtgsgksslg malfrlvels ggcikidgvk
     1081 indigladlr sklsiipqep vlfsgtvrsn ldpfnqysee qiwaalerth mkecvaqlpm
     1141 kldsevmeng enfsvgerql lciarallrr ckilildeat aamdtetdll iqetireafa
     1201 dctmltiahr lhtvlgcdri mvltqgqvve fdtptallan ensrfyamfa aaenkagtss
     1261 slpdassgsc vvqfrklscr kqecctkeet grhnpqegr
//
LOCUS       XP_041323994            1297 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323994
VERSION     XP_041323994.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468060.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1297
                     /product="multidrug resistance-associated protein 5
                     isoform X5"
                     /calculated_mol_wt=145009
     Region          21..1246
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1297
                     /gene="ABCC5"
                     /coded_by="XM_041468060.1:4022..7915"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mfisrnvlqm sfslfpstta fvvkhlleyt qqsesnlqys lflvfgifmt evvrswslal
       61 twalnyrtgv rlrgavltma fkkilklkni kekslgelin vcsndgqrmf eaaavgslla
      121 ggpivailgm vynviilgpt gflgsavfil fypammfvsr ltayfrrkcv attdervqkm
      181 nevlnyikfi kmyawvkpfs qnvqkireee rkileragyf qsitvgvapi vvviasvvtf
      241 svhmilgydl taaqaftvvt vfnsmtfalk vtpfsvksls easvsvdrfk slflmeevhm
      301 ikkkpanpht aievknatla wdfshasvqs spkltpkvkk dkkvtkskke kmklqnegqq
      361 avlaeqkghl lvdsddhhsp eeehkiihlv slrlqrtlyn idleiekgkl vgicgsvgsg
      421 ktslisailg qmtllegsia vsgtfayvaq qawilnatlr dnilfgkeyd eeryntvlng
      481 cclrpdlail pngdlteige rganlsggqr qrislaraly sdrdiyildd plsaldahvg
      541 nhifnsairk hlksktvlfi thqlqylvdc devifmkegc itergsheel mnlngdyati
      601 fnslqlgdtp hieinikknt nnslkrpqdk stktgsvkke kvvkkeeegq lvqleekgkg
      661 svpwsvygvy iqaaggpfaf liimalfvln vgstafsnww lsfwikqgsg nttvtlgnet
      721 visnsmkdnp hmhyyagiya lsmavmlilk avrgvvfvkg tlrassrlhd elfrrilrsp
      781 mkffdttptg rilnrfskdm devdvrlpfq aemfiqnvil vffcvgvisg vfpwflvavg
      841 plivlftvlh vvsrvfirel krldnitqsp flshitssiq glstihayhk gqeflhryqe
      901 llddnqapfy lfscamrwla vrldiisial itttglmivl mhgqippaya glaisyavql
      961 tglfqftvrl asetearfts veridhyikt lsleaparik nktppldwpq egevvfenae
     1021 mryrenlplv lkkvsftikp kekigivgrt gsgksslgma lfrlvelsgg cikidgvkin
     1081 digladlrsk lsiipqepvl fsgtvrsnld pfnqyseeqi waalerthmk ecvaqlpmkl
     1141 dsevmengen fsvgerqllc iarallrrck ilildeataa mdtetdlliq etireafadc
     1201 tmltiahrlh tvlgcdrimv ltqgqvvefd tptallanen srfyamfaaa enkagtsssl
     1261 pdassgscvv qfrklscrkq ecctkeetgr hnpqegr
//
LOCUS       XP_041323995            1249 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323995
VERSION     XP_041323995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1249
                     /product="multidrug resistance-associated protein 5
                     isoform X6"
                     /calculated_mol_wt=139417
     Region          <19..1198
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1249
                     /gene="ABCC5"
                     /coded_by="XM_041468061.1:4170..7919"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mtevvrswsl altwalnyrt gvrlrgavlt mafkkilklk nikekslgel invcsndgqr
       61 mfeaaavgsl laggpivail gmvynviilg ptgflgsavf ilfypammfv srltayfrrk
      121 cvattdervq kmnevlnyik fikmyawvkp fsqnvqkire eerkilerag yfqsitvgva
      181 pivvviasvv tfsvhmilgy dltaaqaftv vtvfnsmtfa lkvtpfsvks lseasvsvdr
      241 fkslflmeev hmikkkpanp htaievknat lawdfshasv qsspkltpkv kkdkkvtksk
      301 kekmklqneg qqavlaeqkg hllvdsddhh speeehkiih lvslrlqrtl ynidleiekg
      361 klvgicgsvg sgktslisai lgqmtllegs iavsgtfayv aqqawilnat lrdnilfgke
      421 ydeeryntvl ngcclrpdla ilpngdltei gerganlsgg qrqrislara lysdrdiyil
      481 ddplsaldah vgnhifnsai rkhlksktvl fithqlqylv dcdevifmke gcitergshe
      541 elmnlngdya tifnslqlgd tphieinikk ntnnslkrpq dkstktgsvk kekvvkkeee
      601 gqlvqleekg kgsvpwsvyg vyiqaaggpf afliimalfv lnvgstafsn wwlsfwikqg
      661 sgnttvtlgn etvisnsmkd nphmhyyagi yalsmavmli lkavrgvvfv kgtlrassrl
      721 hdelfrrilr spmkffdttp tgrilnrfsk dmdevdvrlp fqaemfiqnv ilvffcvgvi
      781 sgvfpwflva vgplivlftv lhvvsrvfir elkrldnitq spflshitss iqglstihay
      841 hkgqeflhry qellddnqap fylfscamrw lavrldiisi alitttglmi vlmhgqippa
      901 yaglaisyav qltglfqftv rlasetearf tsveridhyi ktlsleapar iknktppldw
      961 pqegevvfen aemryrenlp lvlkkvsfti kpkekigivg rtgsgksslg malfrlvels
     1021 ggcikidgvk indigladlr sklsiipqep vlfsgtvrsn ldpfnqysee qiwaalerth
     1081 mkecvaqlpm kldsevmeng enfsvgerql lciarallrr ckilildeat aamdtetdll
     1141 iqetireafa dctmltiahr lhtvlgcdri mvltqgqvve fdtptallan ensrfyamfa
     1201 aaenkagtss slpdassgsc vvqfrklscr kqecctkeet grhnpqegr
//
LOCUS       XP_041323996            1249 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323996
VERSION     XP_041323996.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468062.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1249
                     /product="multidrug resistance-associated protein 5
                     isoform X6"
                     /calculated_mol_wt=139417
     Region          <19..1198
                     /region_name="PLN03130"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215595"
     CDS             1..1249
                     /gene="ABCC5"
                     /coded_by="XM_041468062.1:3038..6787"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mtevvrswsl altwalnyrt gvrlrgavlt mafkkilklk nikekslgel invcsndgqr
       61 mfeaaavgsl laggpivail gmvynviilg ptgflgsavf ilfypammfv srltayfrrk
      121 cvattdervq kmnevlnyik fikmyawvkp fsqnvqkire eerkilerag yfqsitvgva
      181 pivvviasvv tfsvhmilgy dltaaqaftv vtvfnsmtfa lkvtpfsvks lseasvsvdr
      241 fkslflmeev hmikkkpanp htaievknat lawdfshasv qsspkltpkv kkdkkvtksk
      301 kekmklqneg qqavlaeqkg hllvdsddhh speeehkiih lvslrlqrtl ynidleiekg
      361 klvgicgsvg sgktslisai lgqmtllegs iavsgtfayv aqqawilnat lrdnilfgke
      421 ydeeryntvl ngcclrpdla ilpngdltei gerganlsgg qrqrislara lysdrdiyil
      481 ddplsaldah vgnhifnsai rkhlksktvl fithqlqylv dcdevifmke gcitergshe
      541 elmnlngdya tifnslqlgd tphieinikk ntnnslkrpq dkstktgsvk kekvvkkeee
      601 gqlvqleekg kgsvpwsvyg vyiqaaggpf afliimalfv lnvgstafsn wwlsfwikqg
      661 sgnttvtlgn etvisnsmkd nphmhyyagi yalsmavmli lkavrgvvfv kgtlrassrl
      721 hdelfrrilr spmkffdttp tgrilnrfsk dmdevdvrlp fqaemfiqnv ilvffcvgvi
      781 sgvfpwflva vgplivlftv lhvvsrvfir elkrldnitq spflshitss iqglstihay
      841 hkgqeflhry qellddnqap fylfscamrw lavrldiisi alitttglmi vlmhgqippa
      901 yaglaisyav qltglfqftv rlasetearf tsveridhyi ktlsleapar iknktppldw
      961 pqegevvfen aemryrenlp lvlkkvsfti kpkekigivg rtgsgksslg malfrlvels
     1021 ggcikidgvk indigladlr sklsiipqep vlfsgtvrsn ldpfnqysee qiwaalerth
     1081 mkecvaqlpm kldsevmeng enfsvgerql lciarallrr ckilildeat aamdtetdll
     1141 iqetireafa dctmltiahr lhtvlgcdri mvltqgqvve fdtptallan ensrfyamfa
     1201 aaenkagtss slpdassgsc vvqfrklscr kqecctkeet grhnpqegr
//
LOCUS       XP_041323997             614 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323997
VERSION     XP_041323997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468063.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..614
                     /product="multidrug resistance-associated protein 5
                     isoform X7"
                     /calculated_mol_wt=68766
     Region          1..305
                     /region_name="ABC_6TM_MRP5_8_9_D2"
                     /note="Six-transmembrane helical domain 2 (TMD2) of
                     multidrug resistance-associated proteins (MRPs) 5, 8, and
                     9; cd18599"
                     /db_xref="CDD:350043"
     Region          47..96
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:350043"
     Region          103..148
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:350043"
     Region          149..198
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:350043"
     Region          210..255
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:350043"
     Region          271..304
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:350043"
     Region          329..549
                     /region_name="ABCC_MRP_domain2"
                     /note="ATP-binding cassette domain 2 of multidrug
                     resistance-associated protein; cd03244"
                     /db_xref="CDD:213211"
     CDS             1..614
                     /gene="ABCC5"
                     /coded_by="XM_041468063.1:219..2063"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 malfvlnvgs tafsnwwlsf wikqgsgntt vtlgnetvis nsmkdnphmh yyagiyalsm
       61 avmlilkavr gvvfvkgtlr assrlhdelf rrilrspmkf fdttptgril nrfskdmdev
      121 dvrlpfqaem fiqnvilvff cvgvisgvfp wflvavgpli vlftvlhvvs rvfirelkrl
      181 dnitqspfls hitssiqgls tihayhkgqe flhryqelld dnqapfylfs camrwlavrl
      241 diisialitt tglmivlmhg qippayagla isyavqltgl fqftvrlase tearftsver
      301 idhyiktlsl eapariknkt ppldwpqege vvfenaemry renlplvlkk vsftikpkek
      361 igivgrtgsg ksslgmalfr lvelsggcik idgvkindig ladlrsklsi ipqepvlfsg
      421 tvrsnldpfn qyseeqiwaa lerthmkecv aqlpmkldse vmengenfsv gerqllciar
      481 allrrckili ldeataamdt etdlliqeti reafadctml tiahrlhtvl gcdrimvltq
      541 gqvvefdtpt allanensrf yamfaaaenk agtssslpda ssgscvvqfr klscrkqecc
      601 tkeetgrhnp qegr
//
LOCUS       XP_041323998             245 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323998
VERSION     XP_041323998.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468064.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="multidrug resistance-associated protein 5
                     isoform X8"
                     /calculated_mol_wt=28051
     Region          100..>162
                     /region_name="PLN03232"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215640"
     CDS             1..245
                     /gene="ABCC5"
                     /coded_by="XM_041468064.1:188..925"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mkdidigkey iipspgyrsv reradsvhee qeesnfphsk lkqiecqdal eaaaraeglp
       61 ldisvhsqlr mldeehhkgk yhhglnalkp irttskhqhp vdnaglfssm tfswltplah
      121 raykkgelfm ddvwslsrhe ssdvncrrle rlwqeelken gpddaslrrv vwifcrtrli
      181 lsivclmitq lagfsgphfq dgcflrqdea fllarataks kaglyfimge sikqcckial
      241 kfwee
//
LOCUS       XP_041323999             236 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041323999
VERSION     XP_041323999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468065.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..236
                     /product="multidrug resistance-associated protein 5
                     isoform X9"
                     /calculated_mol_wt=26878
     Region          100..>162
                     /region_name="PLN03232"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215640"
     CDS             1..236
                     /gene="ABCC5"
                     /coded_by="XM_041468065.1:188..898"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mkdidigkey iipspgyrsv reradsvhee qeesnfphsk lkqiecqdal eaaaraeglp
       61 ldisvhsqlr mldeehhkgk yhhglnalkp irttskhqhp vdnaglfssm tfswltplah
      121 raykkgelfm ddvwslsrhe ssdvncrrle rlwqeelken gpddaslrrv vwifcrtrli
      181 lsivclmitq lagfsgphfq dgcflrqdea fllarataks kgmfckcpsh ssplql
//
LOCUS       XP_041324000             235 aa            linear   VRT 06-MAY-2021
DEFINITION  multidrug resistance-associated protein 5 isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324000
VERSION     XP_041324000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..235
                     /product="multidrug resistance-associated protein 5
                     isoform X10"
                     /calculated_mol_wt=26748
     Region          100..>162
                     /region_name="PLN03232"
                     /note="ABC transporter C family member; Provisional"
                     /db_xref="CDD:215640"
     CDS             1..235
                     /gene="ABCC5"
                     /coded_by="XM_041468066.1:188..895"
                     /db_xref="GeneID:121353869"
ORIGIN      
        1 mkdidigkey iipspgyrsv reradsvhee qeesnfphsk lkqiecqdal eaaaraeglp
       61 ldisvhsqlr mldeehhkgk yhhglnalkp irttskhqhp vdnaglfssm tfswltplah
      121 raykkgelfm ddvwslsrhe ssdvncrrle rlwqeelken gpddaslrrv vwifcrtrli
      181 lsivclmitq lagfsgphfq dgcflrqdea fllarataks kgircetplg vypae
//
LOCUS       XP_041324002             299 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 50 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324002
VERSION     XP_041324002.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468068.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="coiled-coil domain-containing protein 50 isoform
                     X1"
                     /calculated_mol_wt=35073
     Region          4..129
                     /region_name="CCDC50_N"
                     /note="Coiled-coil domain-containing protein 50
                     N-terminus; pfam15295"
                     /db_xref="CDD:464621"
     CDS             1..299
                     /gene="CCDC50"
                     /coded_by="XM_041468068.1:137..1036"
                     /db_xref="GeneID:121353870"
ORIGIN      
        1 magigidhsk lpgvkevcrd failedhtla hnlqeqeieh hlatnvqrnr lvqhdlqmak
       61 qlqeeedkka raqiqkhqkd lerqdceiaq eiqvklafea eerrrqeekd edmarllqqk
      121 elqeekkrkk hypesqghag yeecyyaeng gtnlrgrkqa mydgprmeqe lsdaeiarkl
      181 qeeellanea dqkaaqvaqd eeiarllmae ekkalrkeke rekssfekrr hdqdwkpeag
      241 estrsrsrev petqrhrsdr psrsqpllde hsryytsqps plrqipkpeh spkgarrkq
//
LOCUS       XP_041324003             532 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 50 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324003
VERSION     XP_041324003.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468069.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520318.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..532
                     /product="coiled-coil domain-containing protein 50 isoform
                     X2"
                     /calculated_mol_wt=62180
     Region          4..129
                     /region_name="CCDC50_N"
                     /note="Coiled-coil domain-containing protein 50
                     N-terminus; pfam15295"
                     /db_xref="CDD:464621"
     CDS             1..532
                     /gene="CCDC50"
                     /coded_by="XM_041468069.1:202..1800"
                     /db_xref="GeneID:121353870"
ORIGIN      
        1 magigidhsk lpgvkevcrd failedhtla hnlqeqeieh hlatnvqrnr lvqhdlqmak
       61 qlqeeedkka raqiqkhqkd lerqdceiaq eiqvklafea eerrrqeekd edmarllqqk
      121 elqeekkrkk hypesqghag yeecyyaeng eqpwgdpreq isepprahsh grcrhqhrer
      181 rgppsplpsh apkhghstse gcgrspqlre assghqqeqk tasqgrsrrh lsldmerete
      241 hraydhsnsw elqerrtagk ekerrllsld levehgltee arhsrkpprq drekhlplle
      301 meleaqqetw hrggrqhpek hrshhqghss hrmardekly daesrddhrr gearaykrag
      361 hrshspspha vsqgkvgicq rdpgtnlrgr kqamydgprm eqelsdaeia rklqeeella
      421 neadqkaaqv aqdeeiarll maeekkalrk ekerekssfe krrhdqdwkp eagestrsrs
      481 revpetqrhr sdrpsrsqpl ldehsryyts qpsplrqipk pehspkgarr kq
//
LOCUS       XP_041324004             529 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal leader peptide-processing protease [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324004
VERSION     XP_041324004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468070.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="peroxisomal leader peptide-processing protease"
                     /calculated_mol_wt=53439
     Region          320..461
                     /region_name="Trypsin_2"
                     /note="Trypsin-like peptidase domain; pfam13365"
                     /db_xref="CDD:433149"
     CDS             1..529
                     /gene="TYSND1"
                     /coded_by="XM_041468070.1:1..1590"
                     /db_xref="GeneID:121353882"
ORIGIN      
        1 mspgtsagnk glglvcaage agsergrvvs gprvprggcg ppvpalrgrr gsrggskrap
       61 lcpgsgagpg prtprespag acpprarpap angegaarrg lggeagglre lgarllalvp
      121 caafrraler glgraerwrf gaeeeagsep ralpwfawlr vpgldapegg waarasagcl
      181 rkgqallacg spfgdlcpel flntlsrgvv snlageenal vltdarclpg teggaafvps
      241 pdgprvvavi aasfcwkgae wvgltllcsl aailrssaav lgeagiavpp vpawvaavpa
      301 ssgrdplgwt alvecgatwg sgvllaprml ltcrhvvear aplrvtpaag pgqdaavlrg
      361 rvvfateess pfdvavvele esvpgfvppc lattflpgee vsvvgfgalg pacgpsvtag
      421 ilsavvavag rpvmlqttca vhggssggpl vssrsgslmg ivasntrdta agatyphlnf
      481 cipitvlqpl varyrrtgdp aafaglnrvg egvratwqlq qrpgfpskl
//
LOCUS       XP_041324005             536 aa            linear   VRT 06-MAY-2021
DEFINITION  prolyl 4-hydroxylase subunit alpha-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324005
VERSION     XP_041324005.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468071.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="prolyl 4-hydroxylase subunit alpha-1 isoform X1"
                     /calculated_mol_wt=61331
     Region          28..159
                     /region_name="P4Ha_N"
                     /note="Prolyl 4-Hydroxylase alpha-subunit, N-terminal
                     region; pfam08336"
                     /db_xref="CDD:462433"
     Region          <174..262
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          347..520
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..536
                     /gene="P4HA1"
                     /coded_by="XM_041468071.1:96..1706"
                     /db_xref="GeneID:121353883"
ORIGIN      
        1 mafkklwcal algfllpfsc ahtdfftsig hmtdlintek dlvvslkdyi kaeeskleqi
       61 kkwaekldql tatatkdpeg flghpvnafk lmkrlntewg eleslvlkdm sdgfisnmti
      121 qrqffpnded qtgaakallr lqdtynldtd tlsrgnlpgv khksfltaed cfelgkiayt
      181 eadyyhtelw meqalkqlde gevssadkvy ildylsyavy qqgdlgkama ltrrlleldp
      241 ehqrangnmk yfeyimakek eanksstdse eqqeketevk kkdylperrk yemlcrgegl
      301 kmtprrqkrl fcryydgnrn pryilgpvkq edewdkpriv rfldiisdee ietvkelakp
      361 rlsratvhdp etgklttahy rvsksawlsg yespvvsrin triqdltgld vstaeelqva
      421 nygvggqyep hfdfgrkdep dafkelgtgn riatwlfyms dvsaggatvf pevgasvwpr
      481 kgtavfwynl fpsgegdyst rhaacpvlvg nkwvsnkwlh ergqefrrpc tlsele
//
LOCUS       XP_041324007             536 aa            linear   VRT 06-MAY-2021
DEFINITION  prolyl 4-hydroxylase subunit alpha-1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324007
VERSION     XP_041324007.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468073.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="prolyl 4-hydroxylase subunit alpha-1 isoform X2"
                     /calculated_mol_wt=61332
     Region          28..159
                     /region_name="P4Ha_N"
                     /note="Prolyl 4-Hydroxylase alpha-subunit, N-terminal
                     region; pfam08336"
                     /db_xref="CDD:462433"
     Region          <174..262
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          347..520
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..536
                     /gene="P4HA1"
                     /coded_by="XM_041468073.1:96..1706"
                     /db_xref="GeneID:121353883"
ORIGIN      
        1 mafkklwcal algfllpfsc ahtdfftsig hmtdlintek dlvvslkdyi kaeeskleqi
       61 kkwaekldql tatatkdpeg flghpvnafk lmkrlntewg eleslvlkdm sdgfisnmti
      121 qrqffpnded qtgaakallr lqdtynldtd tlsrgnlpgv khksfltaed cfelgkiayt
      181 eadyyhtelw meqalkqlde gevssadkvy ildylsyavy qqgdlgkama ltrrlleldp
      241 ehqrangnmk yfeyimakek eanksstdse eqqeketevk kkdylperrk yemlcrgegl
      301 kmtprrqkrl fcryydgnrn pryilgpvkq edewdkpriv rfldiisdee ietvkelakp
      361 rlrratisnp itgaletahy risksawlsg yespvvsrin triqdltgld vstaeelqva
      421 nygvggqyep hfdfgrkdep dafkelgtgn riatwlfyms dvsaggatvf pevgasvwpr
      481 kgtavfwynl fpsgegdyst rhaacpvlvg nkwvsnkwlh ergqefrrpc tlsele
//
LOCUS       XP_041324008             536 aa            linear   VRT 06-MAY-2021
DEFINITION  prolyl 4-hydroxylase subunit alpha-1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324008
VERSION     XP_041324008.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468074.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="prolyl 4-hydroxylase subunit alpha-1 isoform X3"
                     /calculated_mol_wt=61345
     Region          28..159
                     /region_name="P4Ha_N"
                     /note="Prolyl 4-Hydroxylase alpha-subunit, N-terminal
                     region; pfam08336"
                     /db_xref="CDD:462433"
     Region          <174..262
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          347..520
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..536
                     /gene="P4HA1"
                     /coded_by="XM_041468074.1:96..1706"
                     /db_xref="GeneID:121353883"
ORIGIN      
        1 mafkklwcal algfllpfsc ahtdfftsig hmtdlintek dlvvslkdyi kaeeskleqi
       61 kkwaekldql tatatkdpeg flghpvnafk lmkrlntewg eleslvlkdm sdgfisnmti
      121 qrqffpnded qtgaakallr lqdtynldtd tlsrgnlpgv khksfltaed cfelgkiayt
      181 eadyyhtelw meqalkqlde gevssadkvy ildylsyavy qqgdlgkama ltrrlleldp
      241 ehqrangnmk yfeyimakek eanksstdse eqqeketevk kkdylperrk yemlcrgegl
      301 kmtprrqkrl fcryydgnrn pryilgpvkq edewdkpriv rfldiisdee ietvkelakp
      361 rlsratvhdp etgklttahy rvsksawlsg yespvvsrin triqdltgld vstaeelqva
      421 nygvggqyep hfdfarkdep dafkelgtgn riatwlfyms dvsaggatvf pevgasvwpr
      481 kgtavfwynl fpsgegdyst rhaacpvlvg nkwvsnkwlh ergqefrrpc tlsele
//
LOCUS       XP_041324009             536 aa            linear   VRT 06-MAY-2021
DEFINITION  prolyl 4-hydroxylase subunit alpha-1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324009
VERSION     XP_041324009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468075.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="prolyl 4-hydroxylase subunit alpha-1 isoform X4"
                     /calculated_mol_wt=61346
     Region          28..159
                     /region_name="P4Ha_N"
                     /note="Prolyl 4-Hydroxylase alpha-subunit, N-terminal
                     region; pfam08336"
                     /db_xref="CDD:462433"
     Region          <174..262
                     /region_name="BepA"
                     /note="Outer membrane protein chaperone/metalloprotease
                     BepA/YfgC, contains M48 and TPR domains [Cell
                     wall/membrane/envelope biogenesis, Posttranslational
                     modification, protein turnover, chaperones]; COG4783"
                     /db_xref="CDD:443813"
     Region          347..520
                     /region_name="P4Hc"
                     /note="Prolyl 4-hydroxylase alpha subunit homologues;
                     smart00702"
                     /db_xref="CDD:214780"
     CDS             1..536
                     /gene="P4HA1"
                     /coded_by="XM_041468075.1:96..1706"
                     /db_xref="GeneID:121353883"
ORIGIN      
        1 mafkklwcal algfllpfsc ahtdfftsig hmtdlintek dlvvslkdyi kaeeskleqi
       61 kkwaekldql tatatkdpeg flghpvnafk lmkrlntewg eleslvlkdm sdgfisnmti
      121 qrqffpnded qtgaakallr lqdtynldtd tlsrgnlpgv khksfltaed cfelgkiayt
      181 eadyyhtelw meqalkqlde gevssadkvy ildylsyavy qqgdlgkama ltrrlleldp
      241 ehqrangnmk yfeyimakek eanksstdse eqqeketevk kkdylperrk yemlcrgegl
      301 kmtprrqkrl fcryydgnrn pryilgpvkq edewdkpriv rfldiisdee ietvkelakp
      361 rlrratisnp itgaletahy risksawlsg yespvvsrin triqdltgld vstaeelqva
      421 nygvggqyep hfdfarkdep dafkelgtgn riatwlfyms dvsaggatvf pevgasvwpr
      481 kgtavfwynl fpsgegdyst rhaacpvlvg nkwvsnkwlh ergqefrrpc tlsele
//
LOCUS       XP_041324010             488 aa            linear   VRT 06-MAY-2021
DEFINITION  oncoprotein-induced transcript 3 protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324010
VERSION     XP_041324010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..488
                     /product="oncoprotein-induced transcript 3 protein isoform
                     X1"
                     /calculated_mol_wt=53545
     Region          123..158
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          164..199
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          205..451
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..488
                     /gene="OIT3"
                     /coded_by="XM_041468076.1:277..1743"
                     /db_xref="GeneID:121353884"
ORIGIN      
        1 magdamptfc ipenhcgtha pvwmngshpr padgivrrqa casfsgnccl wnttievkac
       61 pggyyvyhlt kpsvcfhayc ghfydicdvv dcqdscldtg dctcspgttl gpdgqtclde
      121 neceqnnggc sefcvnlkns frcecgvgrt lgsdgktcee iegchnnngg cshtcieveg
      181 tyqcecprgl vlsednhtcq vpvlcksssi evnipkdlvg gldlslints ckgvsngthv
      241 nihfslkscg tvvdvindki iatnlvtglp kqtpgsngdi ivrtskllip vtcefprryt
      301 isegyvpnlk nspleimsrn qgvfpftlei fkdkdfdepy rgdlptlklr dslyfgiepl
      361 vhisgletlv escfatptsk ideilkyyli qdgcvsddsv kqytskdhla khfqvpvfkf
      421 vgkdnkevfl hcrilvcgal detsrcaqgc rrrvrrsaeq reeqqdkesv hvanhlltgg
      481 piridfdd
//
LOCUS       XP_041324011             488 aa            linear   VRT 06-MAY-2021
DEFINITION  oncoprotein-induced transcript 3 protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324011
VERSION     XP_041324011.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468077.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..488
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..488
                     /product="oncoprotein-induced transcript 3 protein isoform
                     X1"
                     /calculated_mol_wt=53545
     Region          123..158
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          164..199
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          205..451
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..488
                     /gene="OIT3"
                     /coded_by="XM_041468077.1:277..1743"
                     /db_xref="GeneID:121353884"
ORIGIN      
        1 magdamptfc ipenhcgtha pvwmngshpr padgivrrqa casfsgnccl wnttievkac
       61 pggyyvyhlt kpsvcfhayc ghfydicdvv dcqdscldtg dctcspgttl gpdgqtclde
      121 neceqnnggc sefcvnlkns frcecgvgrt lgsdgktcee iegchnnngg cshtcieveg
      181 tyqcecprgl vlsednhtcq vpvlcksssi evnipkdlvg gldlslints ckgvsngthv
      241 nihfslkscg tvvdvindki iatnlvtglp kqtpgsngdi ivrtskllip vtcefprryt
      301 isegyvpnlk nspleimsrn qgvfpftlei fkdkdfdepy rgdlptlklr dslyfgiepl
      361 vhisgletlv escfatptsk ideilkyyli qdgcvsddsv kqytskdhla khfqvpvfkf
      421 vgkdnkevfl hcrilvcgal detsrcaqgc rrrvrrsaeq reeqqdkesv hvanhlltgg
      481 piridfdd
//
LOCUS       XP_041324012             458 aa            linear   VRT 06-MAY-2021
DEFINITION  oncoprotein-induced transcript 3 protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324012
VERSION     XP_041324012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..458
                     /product="oncoprotein-induced transcript 3 protein isoform
                     X2"
                     /calculated_mol_wt=50000
     Region          123..158
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          164..199
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          205..456
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..458
                     /gene="OIT3"
                     /coded_by="XM_041468078.1:277..1653"
                     /db_xref="GeneID:121353884"
ORIGIN      
        1 magdamptfc ipenhcgtha pvwmngshpr padgivrrqa casfsgnccl wnttievkac
       61 pggyyvyhlt kpsvcfhayc ghfydicdvv dcqdscldtg dctcspgttl gpdgqtclde
      121 neceqnnggc sefcvnlkns frcecgvgrt lgsdgktcee iegchnnngg cshtcieveg
      181 tyqcecprgl vlsednhtcq vpvlcksssi evnipkdlvg gldlslints ckgvsngthv
      241 nihfslkscg tvvdvindki iatnlvtglp kqtpgsngdi ivrtskllip vtcefprryt
      301 isegyvpnlk nspleimsrn qgvfpftlei fkdkdfdepy rgdlptlklr dslyfgiepl
      361 vhisgletlv escfatptsk ideilkyyli qdgcvsddsv kqytskdhla khfqvpvfkf
      421 vgkdnklcfp slleillhvs inpcktsrfl thsscqst
//
LOCUS       XP_041324013             553 aa            linear   VRT 06-MAY-2021
DEFINITION  oncoprotein-induced transcript 3 protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324013
VERSION     XP_041324013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..553
                     /product="oncoprotein-induced transcript 3 protein isoform
                     X3"
                     /calculated_mol_wt=61066
     Region          188..223
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          229..264
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          270..516
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..553
                     /gene="OIT3"
                     /coded_by="XM_041468079.1:1883..3544"
                     /db_xref="GeneID:121353884"
ORIGIN      
        1 mfqylffciy fviqlqpvss maldpcsayi slnepwrnte hringshgqp tcdsgidgew
       61 yrftgmagda mptfcipenh cgthapvwmn gshprpadgi vrrqacasfs gncclwntti
      121 evkacpggyy vyhltkpsvc fhaycghfyd icdvvdcqds cldtgdctcs pgttlgpdgq
      181 tcldeneceq nnggcsefcv nlknsfrcec gvgrtlgsdg ktceeiegch nnnggcshtc
      241 ievegtyqce cprglvlsed nhtcqvpvlc ksssievnip kdlvggldls lintsckgvs
      301 ngthvnihfs lkscgtvvdv indkiiatnl vtglpkqtpg sngdiivrts kllipvtcef
      361 prrytisegy vpnlknsple imsrnqgvfp ftleifkdkd fdepyrgdlp tlklrdslyf
      421 gieplvhisg letlvescfa tptskideil kyyliqdgcv sddsvkqyts kdhlakhfqv
      481 pvfkfvgkdn kevflhcril vcgaldetsr caqgcrrrvr rsaeqreeqq dkesvhvanh
      541 lltggpirid fdd
//
LOCUS       XP_041324014             198 aa            linear   VRT 06-MAY-2021
DEFINITION  group XIIB secretory phospholipase A2-like protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324014
VERSION     XP_041324014.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468080.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="group XIIB secretory phospholipase A2-like
                     protein"
                     /calculated_mol_wt=21932
     Region          16..198
                     /region_name="PLA2G12"
                     /note="Group XII secretory phospholipase A2 precursor
                     (PLA2G12); pfam06951"
                     /db_xref="CDD:399731"
     CDS             1..198
                     /gene="PLA2G12B"
                     /coded_by="XM_041468080.1:805..1401"
                     /db_xref="GeneID:121353885"
ORIGIN      
        1 mrlllraall cltlrlghgs eeaapgspgq qdsqavssys dwgidtirdg fetvnsyfds
       61 flellggkng vcqyrcrygk apmprphykp qepngcsshf lglkldlgip amtkccnqld
      121 icydtcgank yrcdakfrwc lhsicsdlkr slgfvskvqa cesmadtvfn avwtlgcrpf
      181 mnsqrsacic seeerdel
//
LOCUS       XP_041324015            1165 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 14
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324015
VERSION     XP_041324015.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468081.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1165
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 14 isoform X1"
                     /calculated_mol_wt=128441
     Region          84..201
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          255..456
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(397..398,401,407)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          471..540
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          554..606
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          611..712
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          714..827
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          849..904
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          909..966
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          970..1018
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <1080..>1162
                     /region_name="PHA03291"
                     /note="envelope glycoprotein I; Provisional"
                     /db_xref="CDD:223033"
     CDS             1..1165
                     /gene="ADAMTS14"
                     /coded_by="XM_041468081.1:85..3582"
                     /db_xref="GeneID:121353886"
ORIGIN      
        1 mdylrlvlsc lvplhgclaa gsapelllsg klseygvivp fstdcrgrfl shvvsgdaaa
       61 glgqpacppa pslspslsps psrrrvprsp pdeppqrrll yfnvtvfgke lhlrlspnrr
      121 lvppgavaew qedfevlfre plqqrclftg disgmpgaav aisncdglag lirtdsneff
      181 ieplergqqd teehgrahvv yrrsairqdg aeprhdlhpe vpglqvgelp nslelmaeql
      241 gdaerkrrha rkddynievl lavddsvvrf hgkehvqnyv ltlmnivdei yhdeslgvhi
      301 nivlvrmimv gyrqsvslie rgnpsrsleq vcrwahsqqr sdpqhaehhd havfltrqdf
      361 gpagmqgyap vtgmchplrs ctlnhedgfs safvvahetg hvlgmehdgq gnrcadetsm
      421 gsimaplvqa afhryhwsrc skqelnryih sydcllddpf ehqwptlpel pginysmdeq
      481 crfdfgvgyk tctafrtfdp ckqlwcshpd npyfcktkkg ppldgtecsp gkwcfkghci
      541 wktseqpysq dgswsswskf gscsrtcggg vrsrsrscdn pppayggrqc pgatyeyqvc
      601 naeecpgpyq dfraqqcskr nsyythqnsk hswlpyehhd daqkcelicq segtgdvvfm
      661 nqvvhdgtrc syrdpysvcv rgeclhvgcd kevgslkqdd kcgvcggdns hcrtvkgtla
      721 ktpkqpgvlk mfeipagarh lqieemepas hsiavknqat gnfilnakgq eaksqvfiem
      781 gleweytveq gkeslktsgp lheaisvlvi pqeeevrssl myryiihedl lpmignnnvl
      841 leemdsyewa lkswsqcska cgggiqytky gcrrksdnrm vhrnfcdngk kpkpirrrcn
      901 lqecsqpmwv aeewgacsrs cgklgvqara vqcvqrlqdg tnrtlhskyc pgqrpetrrp
      961 cgrlpcpaqw rtgawsecsv tcgegvqqrq vvckgsdsga rcegdkpeai qgchvavcpg
     1021 klsgitasad agdhgttkgq rvpqdgaknp vskissrepc lgdksifcqm evlarycsip
     1081 gynklccesc gkkasssstg sppvtsippg attpspalal lpypttparg epagnptvap
     1141 gvsssgafpg elpaprepgr gqgar
//
LOCUS       XP_041324017            1162 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 14
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324017
VERSION     XP_041324017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1162
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 14 isoform X2"
                     /calculated_mol_wt=128124
     Region          84..201
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          255..453
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(394..395,398,404)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          468..537
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          551..603
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          608..709
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          711..824
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          846..901
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          906..963
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          967..1015
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <1077..>1159
                     /region_name="PHA03291"
                     /note="envelope glycoprotein I; Provisional"
                     /db_xref="CDD:223033"
     CDS             1..1162
                     /gene="ADAMTS14"
                     /coded_by="XM_041468083.1:85..3573"
                     /db_xref="GeneID:121353886"
ORIGIN      
        1 mdylrlvlsc lvplhgclaa gsapelllsg klseygvivp fstdcrgrfl shvvsgdaaa
       61 glgqpacppa pslspslsps psrrrvprsp pdeppqrrll yfnvtvfgke lhlrlspnrr
      121 lvppgavaew qedfevlfre plqqrclftg disgmpgaav aisncdglag lirtdsneff
      181 ieplergqqd teehgrahvv yrrsairqdg aeprhdlhpe vpglqvgelp nslelmaeql
      241 gdaerkrrha rkddynievl lavddsvvrf hgkehvqnyv ltlmnivdei yhdeslgvhi
      301 nivlvrmimv gyrqsvslie rgnpsrsleq vcrwahsqqr sdpqhaehhd havfltrqdf
      361 gpagyapvtg mchplrsctl nhedgfssaf vvahetghvl gmehdgqgnr cadetsmgsi
      421 maplvqaafh ryhwsrcskq elnryihsyd cllddpfehq wptlpelpgi nysmdeqcrf
      481 dfgvgyktct afrtfdpckq lwcshpdnpy fcktkkgppl dgtecspgkw cfkghciwkt
      541 seqpysqdgs wsswskfgsc srtcgggvrs rsrscdnppp ayggrqcpga tyeyqvcnae
      601 ecpgpyqdfr aqqcskrnsy ythqnskhsw lpyehhddaq kcelicqseg tgdvvfmnqv
      661 vhdgtrcsyr dpysvcvrge clhvgcdkev gslkqddkcg vcggdnshcr tvkgtlaktp
      721 kqpgvlkmfe ipagarhlqi eemepashsi avknqatgnf ilnakgqeak sqvfiemgle
      781 weytveqgke slktsgplhe aisvlvipqe eevrsslmyr yiihedllpm ignnnvllee
      841 mdsyewalks wsqcskacgg giqytkygcr rksdnrmvhr nfcdngkkpk pirrrcnlqe
      901 csqpmwvaee wgacsrscgk lgvqaravqc vqrlqdgtnr tlhskycpgq rpetrrpcgr
      961 lpcpaqwrtg awsecsvtcg egvqqrqvvc kgsdsgarce gdkpeaiqgc hvavcpgkls
     1021 gitasadagd hgttkgqrvp qdgaknpvsk issrepclgd ksifcqmevl arycsipgyn
     1081 klccescgkk asssstgspp vtsippgatt pspalallpy pttpargepa gnptvapgvs
     1141 ssgafpgelp aprepgrgqg ar
//
LOCUS       XP_041324018             909 aa            linear   VRT 06-MAY-2021
DEFINITION  microsomal triglyceride transfer protein-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324018
VERSION     XP_041324018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..909
                     /product="microsomal triglyceride transfer protein-like"
                     /calculated_mol_wt=100244
     Region          52..598
                     /region_name="Vitellogenin_N"
                     /note="Lipoprotein amino terminal region; pfam01347"
                     /db_xref="CDD:460170"
     Region          611..907
                     /region_name="Vit_open_b-sht"
                     /note="Vitellinogen, open beta-sheet; cl11721"
                     /db_xref="CDD:472237"
     CDS             1..909
                     /gene="LOC121353888"
                     /coded_by="XM_041468084.1:107..2836"
                     /db_xref="GeneID:121353888"
ORIGIN      
        1 mknqvwkkks qvsslfftnp gkpwqpdlnn qpakvqlhfe aslsagnllp sfqprslyqy
       61 ryslavqlqh sstaspwgag lqaealirlq plrrepggee llqlqihdlk aqhqpaeers
      121 qdstggspvd ialspeaqae lqqpvliswn sgkvkafygn eaenilisnl krgiislfql
      181 qshagttvee dasgscqvty tvsnhsvtkt kdllscskpk sgfsstnkif gvewqpssrt
      241 qyvvkenllq svlaeeshvv apalrsrsgi kissrqqlql vspampgpae lsgqslkdvl
      301 agtgtrpqpl gmaslpfrrv cthcpslraf lkafdrqrvr tdtskvattw qfqrfiqllr
      361 sarkrdvlql lrrapeetrp flveaavaaq svaslaalsd fldfsqepks llekflytaa
      421 fsprpsgell hlvldkldgk qlapeiwetg ivavgslvgk lcqqklcglq vvergveail
      481 rglrgaeeep evvisllalg narlpetipt llehaedgpt avttaatsal qrfpaphiss
      541 kvkrvmrrif hqkrksydkt crlaaaeill dnhplpmdvi nillatseme tevatflllk
      601 vqnrlrdhhh larkimkdim edprinnynf fskvgisssf sgplavtqdl tstfgldllf
      661 leggflrksv sdfsllshgq rlraaqvtfe aqgmesmmge slsegeeepe lmagmsatff
      721 dvqlrpviff qgytdlmakv llssgeptsv vrgnlllmdh lqviplqsgl qvtvklqggl
      781 gldisadmdv siweqelkts vnargsfamd fqaeldspfl qatlrsqtev etsihfdtkl
      841 rfssspvlmc lqlreeqvpy revltvsqaa gsrsstarkg rhgtvpgref alhqtnsklc
      901 nllltaeke
//
LOCUS       XP_041324019             115 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 4E-binding protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324019
VERSION     XP_041324019.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468085.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..115
                     /product="eukaryotic translation initiation factor
                     4E-binding protein 2"
                     /calculated_mol_wt=12114
     Region          9..115
                     /region_name="eIF_4EBP"
                     /note="Eukaryotic translation initiation factor 4E binding
                     protein (EIF4EBP); pfam05456"
                     /db_xref="CDD:461656"
     CDS             1..115
                     /gene="EIF4EBP2"
                     /coded_by="XM_041468085.1:68..415"
                     /db_xref="GeneID:121353889"
ORIGIN      
        1 mssaggrqps qsraiptrtv tlsdaaqlpa dycttpggtl fsttpggtri iydrkflldr
       61 rnspmaktpp chlpnipgvt spgeaaeepk adtnslnhqe gkpsmgddaq femdi
//
LOCUS       XP_041324020             198 aa            linear   VRT 06-MAY-2021
DEFINITION  GTP-binding protein SAR1a [Pyrgilauda ruficollis].
ACCESSION   XP_041324020
VERSION     XP_041324020.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468086.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="GTP-binding protein SAR1a"
                     /calculated_mol_wt=22260
     Region          3..197
                     /region_name="Sar1"
                     /note="Sar1 is an essential component of COPII vesicle
                     coats; cd00879"
                     /db_xref="CDD:206645"
     Site            3..5
                     /site_type="active"
                     /note="STAR motif [active]"
                     /db_xref="CDD:206645"
     Site            32..39
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206645"
     Site            order(34..40,56,78,134..135,137,179..181)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206645"
     Site            order(34..35,39,43,50..62,84,89)
                     /site_type="other"
                     /note="GAP interaction site [polypeptide binding]"
                     /db_xref="CDD:206645"
     Site            44..59
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206645"
     Site            order(56..60,65,75,79,85,87..89)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206645"
     Site            56
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206645"
     Site            order(57..64,74,85,88..89)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206645"
     Site            60..74
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206645"
     Site            75..92
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206645"
     Site            75..78
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206645"
     Site            134..137
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206645"
     Site            179..181
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206645"
     CDS             1..198
                     /gene="SAR1A"
                     /coded_by="XM_041468086.1:114..710"
                     /db_xref="GeneID:121353890"
ORIGIN      
        1 msfifewlyn gfssvlqflg lykksgklvf lgldnagktt llhmlkddrl gqhvptlhpt
       61 seeltiagmt fttfdlgghe qarrvwknyl paingivflv dcadhsrlme skvelnalmt
      121 detisnvpil ilgnkidrpe aiseeklrei fglygqttgk gnvplkdlna rpmevfmcsv
      181 lkrqgygegf rwlsqyid
//
LOCUS       XP_041324021             869 aa            linear   VRT 06-MAY-2021
DEFINITION  paladin [Pyrgilauda ruficollis].
ACCESSION   XP_041324021
VERSION     XP_041324021.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468087.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..869
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..869
                     /product="paladin"
                     /calculated_mol_wt=99081
     Region          92..381
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          475..747
                     /region_name="PTP_paladin_2"
                     /note="protein tyrosine phosphatase-like domain of
                     paladin, repeat 2; cd17660"
                     /db_xref="CDD:350498"
     CDS             1..869
                     /gene="PALD1"
                     /coded_by="XM_041468087.1:135..2744"
                     /db_xref="GeneID:121353891"
ORIGIN      
        1 mmgttasaaq qavsasples rapgdgsmed qhslsihsfq tlglhnskak siitnkvapv
       61 vityncreef qihddllkan ytvgriseat lehylvqgky fmvrdvygkl dvlnttgscg
      121 apnfrqakgg yavfgmgqps lngfklvlqk lqreghkecv ffcvreepvv flrlegdfvs
      181 ytprgkenlh enlqrlqrgv raeslelair keirdfaqls esvyyvyndl erlrdephav
      241 rvqcdediqv tdevyrrpvf lqpsyryhrl plpaegaple eqfdafircl respslllrd
      301 pgrpppallf gcqtgvgrtn lamamgtlvl hhhrgaaqkp dfpplpktsp rdrlrviqtf
      361 memvpkgqqi veevdgaias csemhdmkea iyeykkkleg igedyqiqgs stkeyflqrt
      421 lqsleryfyl iafnyylheq yplgfalsfs rwmcrhpely rlqagtncae ltvtaelvtk
      481 garvlvader fcpdvlstak emsvanfrrv pkmpvygtaq psskslgsvl ryltdakrkh
      541 srifwinlre eavlegneqi ytlrepglle elipvpaasp qqlekleaal kgdllkcqkw
      601 levyleaekq mkmfkscltt qeifsqqkns cqgltyrrip ipdfcapkeq dfdrlleamk
      661 salaedsraa fvfncssgrg rtttamviav ltlwhftgip emseeeivsv pdakytkgef
      721 evvmkvvqll pdghrmkkev dmaldtvset mtpmhyhlre iiictyrqgk ssrdereart
      781 lqlrslqyle ryiflilfna ylhlekkdsw qrpfslwmre vaavagvyev lnqlgfpele
      841 slegkalctl rgrwqaqgat srpfrgdfv
//
LOCUS       XP_041324022             290 aa            linear   VRT 06-MAY-2021
DEFINITION  inorganic pyrophosphatase [Pyrgilauda ruficollis].
ACCESSION   XP_041324022
VERSION     XP_041324022.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468088.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..290
                     /product="inorganic pyrophosphatase"
                     /calculated_mol_wt=32418
     Region          4..242
                     /region_name="pyrophosphatase"
                     /note="Inorganic pyrophosphatase. These enzymes hydrolyze
                     inorganic pyrophosphate (PPi) to two molecules of
                     orthophosphates (Pi). The reaction requires bivalent
                     cations. The enzymes in general exist as homooligomers;
                     cl00217"
                     /db_xref="CDD:469666"
     Site            order(54..55,130..131)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238239"
     Site            order(59,81,96,195..196)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238239"
     Site            order(61,118,123,150,155)
                     /site_type="metal-binding"
                     /note="metal binding sites [ion binding]"
                     /db_xref="CDD:238239"
     CDS             1..290
                     /gene="PPA1"
                     /coded_by="XM_041468088.1:40..912"
                     /db_xref="GeneID:121353892"
ORIGIN      
        1 msgygveera gphspeyrlf fkdaagryis pfhdipiyad agknvfnmvv evprwtnakm
       61 eistkeplnp ikqdvkkgkl rfvanvfphk gyiwnygaip qtwedpghkd entgccgdnd
      121 pidvceigsk vcsrgevikv kvlgmlalid egetdwkvia invedpeaas yndiedvrrm
      181 kpgyleatvd wfrrykvpdg kpenqfafng efkgkdfald vikgthehwk alitkktdgg
      241 einctnltvs dspfccsqdc akatvdaapp ckaaspippe vdkwfyyqkn
//
LOCUS       XP_041324025             507 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uptake protein 1, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324025
VERSION     XP_041324025.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468091.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="calcium uptake protein 1, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=57682
     Region          227..471
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cl28896"
                     /db_xref="CDD:333716"
     Region          227..256
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Site            order(236,238,240,247,451,453,455,462)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320080"
     Region          282..379
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          380..434
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          442..471
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     CDS             1..507
                     /gene="MICU1"
                     /coded_by="XM_041468091.1:145..1668"
                     /db_xref="GeneID:121353893"
ORIGIN      
        1 mfrlrflpva aglaavarry hgtaphpgsr rrllvaaflg tsaatasarf lwqrayaeds
       61 vrhgpraepg ekmkheeeee ssssegrrav aagdgeappe gkkkkrsgfr drkvmeyenr
      121 iraystpdki fryfatlkvi nehgesevfm tpqdfvrsit pnekqpenlg ldqfivkryd
      181 gkteklsqer ekfadedsif yalgecglis fsdyiflttv lstpqrnfei afkmfdlngd
      241 gevdmeefeq vqsiirsqts mgmrhrdrst tgntlktgfn salttyffga dlkgkltish
      301 fldfqrklqh dilkleferh dpvdgriter qfgsmllays gvqskkltvm lkqlkkhfqd
      361 gegltfeeve nfftflknin dvdtalsfyh magasldkgr nrslllrwah paprvmqcpp
      421 cvavtmqqva rtvakvelsd hvcdvvfalf dcdgngelsn kefvaimkqr lmrglekpkd
      481 mgftrlmram wkcaqetawd ftapkqq
//
LOCUS       XP_041324026             507 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uptake protein 1, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324026
VERSION     XP_041324026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="calcium uptake protein 1, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=57682
     Region          227..471
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cl28896"
                     /db_xref="CDD:333716"
     Region          227..256
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Site            order(236,238,240,247,451,453,455,462)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320080"
     Region          282..379
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          380..434
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          442..471
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     CDS             1..507
                     /gene="MICU1"
                     /coded_by="XM_041468092.1:568..2091"
                     /db_xref="GeneID:121353893"
ORIGIN      
        1 mfrlrflpva aglaavarry hgtaphpgsr rrllvaaflg tsaatasarf lwqrayaeds
       61 vrhgpraepg ekmkheeeee ssssegrrav aagdgeappe gkkkkrsgfr drkvmeyenr
      121 iraystpdki fryfatlkvi nehgesevfm tpqdfvrsit pnekqpenlg ldqfivkryd
      181 gkteklsqer ekfadedsif yalgecglis fsdyiflttv lstpqrnfei afkmfdlngd
      241 gevdmeefeq vqsiirsqts mgmrhrdrst tgntlktgfn salttyffga dlkgkltish
      301 fldfqrklqh dilkleferh dpvdgriter qfgsmllays gvqskkltvm lkqlkkhfqd
      361 gegltfeeve nfftflknin dvdtalsfyh magasldkgr nrslllrwah paprvmqcpp
      421 cvavtmqqva rtvakvelsd hvcdvvfalf dcdgngelsn kefvaimkqr lmrglekpkd
      481 mgftrlmram wkcaqetawd ftapkqq
//
LOCUS       XP_041324027             507 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uptake protein 1, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324027
VERSION     XP_041324027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="calcium uptake protein 1, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=57682
     Region          227..471
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cl28896"
                     /db_xref="CDD:333716"
     Region          227..256
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Site            order(236,238,240,247,451,453,455,462)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320080"
     Region          282..379
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          380..434
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          442..471
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     CDS             1..507
                     /gene="MICU1"
                     /coded_by="XM_041468093.1:191..1714"
                     /db_xref="GeneID:121353893"
ORIGIN      
        1 mfrlrflpva aglaavarry hgtaphpgsr rrllvaaflg tsaatasarf lwqrayaeds
       61 vrhgpraepg ekmkheeeee ssssegrrav aagdgeappe gkkkkrsgfr drkvmeyenr
      121 iraystpdki fryfatlkvi nehgesevfm tpqdfvrsit pnekqpenlg ldqfivkryd
      181 gkteklsqer ekfadedsif yalgecglis fsdyiflttv lstpqrnfei afkmfdlngd
      241 gevdmeefeq vqsiirsqts mgmrhrdrst tgntlktgfn salttyffga dlkgkltish
      301 fldfqrklqh dilkleferh dpvdgriter qfgsmllays gvqskkltvm lkqlkkhfqd
      361 gegltfeeve nfftflknin dvdtalsfyh magasldkgr nrslllrwah paprvmqcpp
      421 cvavtmqqva rtvakvelsd hvcdvvfalf dcdgngelsn kefvaimkqr lmrglekpkd
      481 mgftrlmram wkcaqetawd ftapkqq
//
LOCUS       XP_041324028             507 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uptake protein 1, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324028
VERSION     XP_041324028.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468094.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="calcium uptake protein 1, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=57682
     Region          227..471
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cl28896"
                     /db_xref="CDD:333716"
     Region          227..256
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Site            order(236,238,240,247,451,453,455,462)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320080"
     Region          282..379
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          380..434
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          442..471
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     CDS             1..507
                     /gene="MICU1"
                     /coded_by="XM_041468094.1:627..2150"
                     /db_xref="GeneID:121353893"
ORIGIN      
        1 mfrlrflpva aglaavarry hgtaphpgsr rrllvaaflg tsaatasarf lwqrayaeds
       61 vrhgpraepg ekmkheeeee ssssegrrav aagdgeappe gkkkkrsgfr drkvmeyenr
      121 iraystpdki fryfatlkvi nehgesevfm tpqdfvrsit pnekqpenlg ldqfivkryd
      181 gkteklsqer ekfadedsif yalgecglis fsdyiflttv lstpqrnfei afkmfdlngd
      241 gevdmeefeq vqsiirsqts mgmrhrdrst tgntlktgfn salttyffga dlkgkltish
      301 fldfqrklqh dilkleferh dpvdgriter qfgsmllays gvqskkltvm lkqlkkhfqd
      361 gegltfeeve nfftflknin dvdtalsfyh magasldkgr nrslllrwah paprvmqcpp
      421 cvavtmqqva rtvakvelsd hvcdvvfalf dcdgngelsn kefvaimkqr lmrglekpkd
      481 mgftrlmram wkcaqetawd ftapkqq
//
LOCUS       XP_041324029             505 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uptake protein 1, mitochondrial isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324029
VERSION     XP_041324029.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468095.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..505
                     /product="calcium uptake protein 1, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=57452
     Region          225..469
                     /region_name="EFh_MICU"
                     /note="EF-hand, calcium binding motif, found in
                     mitochondrial calcium uptake proteins MICU1, MICU2, MICU3,
                     and similar proteins; cl28896"
                     /db_xref="CDD:333716"
     Region          225..254
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Site            order(234,236,238,245,449,451,453,460)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320080"
     Region          280..377
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          378..432
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     Region          440..469
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320080"
     CDS             1..505
                     /gene="MICU1"
                     /coded_by="XM_041468095.1:145..1662"
                     /db_xref="GeneID:121353893"
ORIGIN      
        1 mfrlrflpva aglaavarry hgtaphpgsr rrllvaaflg tsaatasarf lwqrayaeds
       61 vrhgpraepg ekmkheeeee ssssegrrav aagdgeappe gkkkkrsgfr drkvmeyenr
      121 iraystpdki fryfatlkvi nehgesevfm tpqdfvrsit pnekqpenlg ldqfivkryd
      181 gkklsqerek fadedsifya lgecglisfs dyiflttvls tpqrnfeiaf kmfdlngdge
      241 vdmeefeqvq siirsqtsmg mrhrdrsttg ntlktgfnsa lttyffgadl kgkltishfl
      301 dfqrklqhdi lkleferhdp vdgriterqf gsmllaysgv qskkltvmlk qlkkhfqdge
      361 gltfeevenf ftflknindv dtalsfyhma gasldkgrnr slllrwahpa prvmqcppcv
      421 avtmqqvart vakvelsdhv cdvvfalfdc dgngelsnke fvaimkqrlm rglekpkdmg
      481 ftrlmramwk caqetawdft apkqq
//
LOCUS       XP_041324030             482 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uptake protein 1, mitochondrial isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324030
VERSION     XP_041324030.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468096.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="calcium uptake protein 1, mitochondrial isoform
                     X3"
                     /calculated_mol_wt=54871
     Region          227..446
                     /region_name="EFh_MICU1"
                     /note="EF-hand, calcium binding motif, found in calcium
                     uptake protein 1, mitochondrial (MICU1) and similar
                     proteins; cd16173"
                     /db_xref="CDD:320081"
     Region          227..256
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     Site            order(229,381,384,387..388,390,408)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:320081"
     Site            order(236,238,240,247,426,428,430,437)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320081"
     Region          282..379
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     Region          380..409
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     Region          417..446
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     CDS             1..482
                     /gene="MICU1"
                     /coded_by="XM_041468096.1:145..1593"
                     /db_xref="GeneID:121353893"
ORIGIN      
        1 mfrlrflpva aglaavarry hgtaphpgsr rrllvaaflg tsaatasarf lwqrayaeds
       61 vrhgpraepg ekmkheeeee ssssegrrav aagdgeappe gkkkkrsgfr drkvmeyenr
      121 iraystpdki fryfatlkvi nehgesevfm tpqdfvrsit pnekqpenlg ldqfivkryd
      181 gkteklsqer ekfadedsif yalgecglis fsdyiflttv lstpqrnfei afkmfdlngd
      241 gevdmeefeq vqsiirsqts mgmrhrdrst tgntlktgfn salttyffga dlkgkltish
      301 fldfqrklqh dilkleferh dpvdgriter qfgsmllays gvqskkltvm lkqlkkhfqd
      361 gegltfeeve nfftflknin dvdtalsfyh magasldkvt mqqvartvak velsdhvcdv
      421 vfalfdcdgn gelsnkefva imkqrlmrgl ekpkdmgftr lmramwkcaq etawdftapk
      481 qq
//
LOCUS       XP_041324031             480 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uptake protein 1, mitochondrial isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324031
VERSION     XP_041324031.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468097.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..480
                     /product="calcium uptake protein 1, mitochondrial isoform
                     X4"
                     /calculated_mol_wt=54640
     Region          225..444
                     /region_name="EFh_MICU1"
                     /note="EF-hand, calcium binding motif, found in calcium
                     uptake protein 1, mitochondrial (MICU1) and similar
                     proteins; cd16173"
                     /db_xref="CDD:320081"
     Region          225..254
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     Site            order(227,379,382,385..386,388,406)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:320081"
     Site            order(234,236,238,245,424,426,428,435)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320081"
     Region          280..377
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     Region          378..407
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     Region          415..444
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320081"
     CDS             1..480
                     /gene="MICU1"
                     /coded_by="XM_041468097.1:145..1587"
                     /db_xref="GeneID:121353893"
ORIGIN      
        1 mfrlrflpva aglaavarry hgtaphpgsr rrllvaaflg tsaatasarf lwqrayaeds
       61 vrhgpraepg ekmkheeeee ssssegrrav aagdgeappe gkkkkrsgfr drkvmeyenr
      121 iraystpdki fryfatlkvi nehgesevfm tpqdfvrsit pnekqpenlg ldqfivkryd
      181 gkklsqerek fadedsifya lgecglisfs dyiflttvls tpqrnfeiaf kmfdlngdge
      241 vdmeefeqvq siirsqtsmg mrhrdrsttg ntlktgfnsa lttyffgadl kgkltishfl
      301 dfqrklqhdi lkleferhdp vdgriterqf gsmllaysgv qskkltvmlk qlkkhfqdge
      361 gltfeevenf ftflknindv dtalsfyhma gasldkvtmq qvartvakve lsdhvcdvvf
      421 alfdcdgnge lsnkefvaim kqrlmrglek pkdmgftrlm ramwkcaqet awdftapkqq
//
LOCUS       XP_041324032             404 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 16 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324032
VERSION     XP_041324032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="anaphase-promoting complex subunit 16 isoform
                     X1"
                     /calculated_mol_wt=42519
     Region          222..>268
                     /region_name="ANAPC16"
                     /note="Anaphase-promoting complex, subunit 16; pfam17256"
                     /db_xref="CDD:435817"
     CDS             1..404
                     /gene="ANAPC16"
                     /coded_by="XM_041468098.1:40..1254"
                     /db_xref="GeneID:121353894"
ORIGIN      
        1 mtgkgmknqs lrlllprgff ffleggfvfk tlvsqfldtr tsekraataa graqlglqdp
       61 ppdssihrgs agtdsrqghr qgphransrg aegtaatapl gftvtalreg ggsceasplp
      121 pplpppfcsl slpspphtrp agsgarpaps ctasaatraa rtklpsglpa egesvrhgtg
      181 erreaaeark lgrgamaass ssssaggvsg ssvtgsgfsv sdlapprkal ftypkgagem
      241 ledgserflc esvfsfqvas tlkqvkhegg trtvwlrggr prnsarvpag aqpehwvsge
      301 tlwskcqkhs sapavvlgdg hklsqgwvrg qaaspppavp rplpklfplh hcfcgsagri
      361 llclyypetl sslfcirflc dnkitlslkl fiwsdegknq lfrs
//
LOCUS       XP_041324033             110 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 16 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324033
VERSION     XP_041324033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..110
                     /product="anaphase-promoting complex subunit 16 isoform
                     X2"
                     /calculated_mol_wt=11536
     Region          27..106
                     /region_name="ANAPC16"
                     /note="Anaphase-promoting complex, subunit 16; pfam17256"
                     /db_xref="CDD:435817"
     CDS             1..110
                     /gene="ANAPC16"
                     /coded_by="XM_041468099.1:505..837"
                     /db_xref="GeneID:121353894"
ORIGIN      
        1 maassssssa ggvsgssvtg sgfsvsdlap prkalftypk gagemledgs erflcesvfs
       61 fqvastlkqv khdqqvarme klaglveele adewrykpie qllgftpssg
//
LOCUS       XP_041324035             109 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 16 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324035
VERSION     XP_041324035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="anaphase-promoting complex subunit 16 isoform
                     X3"
                     /calculated_mol_wt=11185
     Region          27..95
                     /region_name="ANAPC16"
                     /note="Anaphase-promoting complex, subunit 16; pfam17256"
                     /db_xref="CDD:435817"
     CDS             1..109
                     /gene="ANAPC16"
                     /coded_by="XM_041468101.1:524..853"
                     /db_xref="GeneID:121353894"
ORIGIN      
        1 maassssssa ggvsgssvtg sgfsvsdlap prkalftypk gagemledgs erflcesvfs
       61 fqvastlkqv khdqqvarme klaglveele adewrgghtd svaagrats
//
LOCUS       XP_041324036             287 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 16 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324036
VERSION     XP_041324036.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468102.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="anaphase-promoting complex subunit 16 isoform
                     X4"
                     /calculated_mol_wt=29512
     Region          222..>242
                     /region_name="ANAPC16"
                     /note="Anaphase-promoting complex, subunit 16; pfam17256"
                     /db_xref="CDD:435817"
     CDS             1..287
                     /gene="ANAPC16"
                     /coded_by="XM_041468102.1:259..1122"
                     /db_xref="GeneID:121353894"
ORIGIN      
        1 mtgkgmknqs lrlllprgff ffleggfvfk tlvsqfldtr tsekraataa graqlglqdp
       61 ppdssihrgs agtdsrqghr qgphransrg aegtaatapl gftvtalreg ggsceasplp
      121 pplpppfcsl slpspphtrp agsgarpaps ctasaatraa rtklpsglpa egesvrhgtg
      181 erreaaeark lgrgamaass ssssaggvsg ssvtgsgfsv sdlapprkal ftypkgagem
      241 legdcccpsp sllllqlltf aphwqklema lrgssaslcs afrlhqh
//
LOCUS       XP_041324037             387 aa            linear   VRT 06-MAY-2021
DEFINITION  activating signal cointegrator 1 complex subunit 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324037
VERSION     XP_041324037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..387
                     /product="activating signal cointegrator 1 complex subunit
                     1 isoform X1"
                     /calculated_mol_wt=43986
     Region          92..157
                     /region_name="KH-I_ASCC1"
                     /note="type I K homology (KH) RNA-binding domain found in
                     activating signal cointegrator 1 complex subunit 1 (ASCC1)
                     and similar proteins; cd22419"
                     /db_xref="CDD:411847"
     Site            order(101,103..105,107..111,114..115,118..119,124..127)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411847"
     Region          166..386
                     /region_name="AKAP7_NLS"
                     /note="AKAP7 2'5' RNA ligase-like domain; pfam10469"
                     /db_xref="CDD:402204"
     CDS             1..387
                     /gene="ASCC1"
                     /coded_by="XM_041468103.1:497..1660"
                     /db_xref="GeneID:121353895"
ORIGIN      
        1 mrswtrprtg happppsrpw plgaasrrrr rsrmdvlrpp lvriggrvyr knliqeqafp
       61 heeeeesfys gpgdcadepc dafvveeter gfqcrlevps plykyiigkk getkkrlete
      121 trtsisipkp gvegeivitg qqrsgvvsar tridvlldsf rrrqpfthfl slplnqpaiq
      181 ekflqfkeev lekcskdhgv ssslfqnpak lhltigtlvl lneqeiqkac dllqrckedf
      241 vdqitggqpl tvevagveym nddpamtdvl yakvhmkdgs drlqmvadql verfvasglm
      301 lkewdrvklh atvmntlfrk dpteernntm tgkssfkere sfngqnilkl fenfhfgevq
      361 ldsvrlsqrf ssdasgyyat sgqlcfs
//
LOCUS       XP_041324038             386 aa            linear   VRT 06-MAY-2021
DEFINITION  activating signal cointegrator 1 complex subunit 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324038
VERSION     XP_041324038.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468104.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..386
                     /product="activating signal cointegrator 1 complex subunit
                     1 isoform X2"
                     /calculated_mol_wt=43830
     Region          91..156
                     /region_name="KH-I_ASCC1"
                     /note="type I K homology (KH) RNA-binding domain found in
                     activating signal cointegrator 1 complex subunit 1 (ASCC1)
                     and similar proteins; cd22419"
                     /db_xref="CDD:411847"
     Site            order(100,102..104,106..110,113..114,117..118,123..126)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411847"
     Region          165..385
                     /region_name="AKAP7_NLS"
                     /note="AKAP7 2'5' RNA ligase-like domain; pfam10469"
                     /db_xref="CDD:402204"
     CDS             1..386
                     /gene="ASCC1"
                     /coded_by="XM_041468104.1:498..1658"
                     /db_xref="GeneID:121353895"
ORIGIN      
        1 mrswtrprtg happppsrpw plgaasrrrr srmdvlrppl vriggrvyrk nliqeqafph
       61 eeeeesfysg pgdcadepcd afvveeterg fqcrlevpsp lykyiigkkg etkkrletet
      121 rtsisipkpg vegeivitgq qrsgvvsart ridvlldsfr rrqpfthfls lplnqpaiqe
      181 kflqfkeevl ekcskdhgvs sslfqnpakl hltigtlvll neqeiqkacd llqrckedfv
      241 dqitggqplt vevagveymn ddpamtdvly akvhmkdgsd rlqmvadqlv erfvasglml
      301 kewdrvklha tvmntlfrkd pteernntmt gkssfkeres fngqnilklf enfhfgevql
      361 dsvrlsqrfs sdasgyyats gqlcfs
//
LOCUS       XP_041324039             367 aa            linear   VRT 06-MAY-2021
DEFINITION  activating signal cointegrator 1 complex subunit 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324039
VERSION     XP_041324039.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468105.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..367
                     /product="activating signal cointegrator 1 complex subunit
                     1 isoform X3"
                     /calculated_mol_wt=41667
     Region          92..157
                     /region_name="KH-I_ASCC1"
                     /note="type I K homology (KH) RNA-binding domain found in
                     activating signal cointegrator 1 complex subunit 1 (ASCC1)
                     and similar proteins; cd22419"
                     /db_xref="CDD:411847"
     Site            order(101,103..105,107..111,114..115,118..119,124..127)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411847"
     Region          166..>322
                     /region_name="AKAP7_NLS"
                     /note="AKAP7 2'5' RNA ligase-like domain; pfam10469"
                     /db_xref="CDD:402204"
     CDS             1..367
                     /gene="ASCC1"
                     /coded_by="XM_041468105.1:513..1616"
                     /db_xref="GeneID:121353895"
ORIGIN      
        1 mrswtrprtg happppsrpw plgaasrrrr rsrmdvlrpp lvriggrvyr knliqeqafp
       61 heeeeesfys gpgdcadepc dafvveeter gfqcrlevps plykyiigkk getkkrlete
      121 trtsisipkp gvegeivitg qqrsgvvsar tridvlldsf rrrqpfthfl slplnqpaiq
      181 ekflqfkeev lekcskdhgv ssslfqnpak lhltigtlvl lneqeiqkac dllqrckedf
      241 vdqitggqpl tvevagveym nddpamtdvl yakvhmkdgs drlqmvadql verfvasglm
      301 lkewdrvklh atvmntlfrk dptqlqqrpw vlslvteira apalpfvrkl qalmrsslsl
      361 lqaeqsk
//
LOCUS       XP_041324040             350 aa            linear   VRT 06-MAY-2021
DEFINITION  activating signal cointegrator 1 complex subunit 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324040
VERSION     XP_041324040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="activating signal cointegrator 1 complex subunit
                     1 isoform X4"
                     /calculated_mol_wt=39132
     Region          65..120
                     /region_name="KH-I_ASCC1"
                     /note="type I K homology (KH) RNA-binding domain found in
                     activating signal cointegrator 1 complex subunit 1 (ASCC1)
                     and similar proteins; cd22419"
                     /db_xref="CDD:411847"
     Site            order(66..68,70..74,77..78,81..82,87..90)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:411847"
     Region          129..349
                     /region_name="AKAP7_NLS"
                     /note="AKAP7 2'5' RNA ligase-like domain; pfam10469"
                     /db_xref="CDD:402204"
     CDS             1..350
                     /gene="ASCC1"
                     /coded_by="XM_041468106.1:522..1574"
                     /db_xref="GeneID:121353895"
ORIGIN      
        1 mdtpthrprp spalppvapr srfpeeeeqd gcaaaplgkd wgksvpekph praglpsrgg
       61 ggellfryii gkkgetkkrl etetrtsisi pkpgvegeiv itgqqrsgvv sartridvll
      121 dsfrrrqpft hflslplnqp aiqekflqfk eevlekcskd hgvssslfqn paklhltigt
      181 lvllneqeiq kacdllqrck edfvdqitgg qpltvevagv eymnddpamt dvlyakvhmk
      241 dgsdrlqmva dqlverfvas glmlkewdrv klhatvmntl frkdpteern ntmtgkssfk
      301 eresfngqni lklfenfhfg evqldsvrls qrfssdasgy yatsgqlcfs
//
LOCUS       XP_041324041             374 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily B member 12 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324041
VERSION     XP_041324041.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468107.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="dnaJ homolog subfamily B member 12 isoform X1"
                     /calculated_mol_wt=42378
     Region          109..>214
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          267..365
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..374
                     /gene="DNAJB12"
                     /coded_by="XM_041468107.1:550..1674"
                     /db_xref="GeneID:121353896"
ORIGIN      
        1 mesnrdeaer cigialaaak anqpdkarrf lekaqrlyps qrvrvllesl nkneqsangq
       61 sqprestkpq frkmsgdfps angeaggeap kgytqdqlda vkrvkqckdy yeilgvnrea
      121 sdedlkkayr klalkfhpdk nhapgateaf kaignayavl snpekrkqyd qfgdeklnpa
      181 rhghshadfh rgfeadispe dlfnmffggg fpssnvhvys ngrmrytyhq rqdrrehqgd
      241 gglglfvqlm pililiivsa lsqmmvsspp yslshrlsvg hthrrvtehl kvpyyvsenf
      301 aeeytgtnlk nversveddy ianlrnncwr ekqqkeglly raryfgdsdl yqraqkmgtp
      361 scsrlsdvqa slhg
//
LOCUS       XP_041324042             374 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily B member 12 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324042
VERSION     XP_041324042.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468108.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="dnaJ homolog subfamily B member 12 isoform X1"
                     /calculated_mol_wt=42378
     Region          109..>214
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          267..365
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..374
                     /gene="DNAJB12"
                     /coded_by="XM_041468108.1:553..1677"
                     /db_xref="GeneID:121353896"
ORIGIN      
        1 mesnrdeaer cigialaaak anqpdkarrf lekaqrlyps qrvrvllesl nkneqsangq
       61 sqprestkpq frkmsgdfps angeaggeap kgytqdqlda vkrvkqckdy yeilgvnrea
      121 sdedlkkayr klalkfhpdk nhapgateaf kaignayavl snpekrkqyd qfgdeklnpa
      181 rhghshadfh rgfeadispe dlfnmffggg fpssnvhvys ngrmrytyhq rqdrrehqgd
      241 gglglfvqlm pililiivsa lsqmmvsspp yslshrlsvg hthrrvtehl kvpyyvsenf
      301 aeeytgtnlk nversveddy ianlrnncwr ekqqkeglly raryfgdsdl yqraqkmgtp
      361 scsrlsdvqa slhg
//
LOCUS       XP_041324043             374 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily B member 12 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324043
VERSION     XP_041324043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="dnaJ homolog subfamily B member 12 isoform X1"
                     /calculated_mol_wt=42378
     Region          109..>214
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          267..365
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..374
                     /gene="DNAJB12"
                     /coded_by="XM_041468109.1:553..1677"
                     /db_xref="GeneID:121353896"
ORIGIN      
        1 mesnrdeaer cigialaaak anqpdkarrf lekaqrlyps qrvrvllesl nkneqsangq
       61 sqprestkpq frkmsgdfps angeaggeap kgytqdqlda vkrvkqckdy yeilgvnrea
      121 sdedlkkayr klalkfhpdk nhapgateaf kaignayavl snpekrkqyd qfgdeklnpa
      181 rhghshadfh rgfeadispe dlfnmffggg fpssnvhvys ngrmrytyhq rqdrrehqgd
      241 gglglfvqlm pililiivsa lsqmmvsspp yslshrlsvg hthrrvtehl kvpyyvsenf
      301 aeeytgtnlk nversveddy ianlrnncwr ekqqkeglly raryfgdsdl yqraqkmgtp
      361 scsrlsdvqa slhg
//
LOCUS       XP_041324044             301 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily B member 12 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324044
VERSION     XP_041324044.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468110.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="dnaJ homolog subfamily B member 12 isoform X2"
                     /calculated_mol_wt=34040
     Region          36..>141
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     Region          194..292
                     /region_name="DUF1977"
                     /note="Domain of unknown function (DUF1977); pfam09320"
                     /db_xref="CDD:462754"
     CDS             1..301
                     /gene="DNAJB12"
                     /coded_by="XM_041468110.1:1454..2359"
                     /db_xref="GeneID:121353896"
ORIGIN      
        1 msgdfpsang eaggeapkgy tqdqldavkr vkqckdyyei lgvnreasde dlkkayrkla
       61 lkfhpdknha pgateafkai gnayavlsnp ekrkqydqfg deklnparhg hshadfhrgf
      121 eadispedlf nmffgggfps snvhvysngr mrytyhqrqd rrehqgdggl glfvqlmpil
      181 iliivsalsq mmvssppysl shrlsvghth rrvtehlkvp yyvsenfaee ytgtnlknve
      241 rsveddyian lrnncwrekq qkegllyrar yfgdsdlyqr aqkmgtpscs rlsdvqaslh
      301 g
//
LOCUS       XP_041324045             192 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA damage-inducible transcript 4 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324045
VERSION     XP_041324045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="DNA damage-inducible transcript 4 protein"
                     /calculated_mol_wt=20629
     Region          77..183
                     /region_name="RTP801_C"
                     /note="RTP801 C-terminal region; pfam07809"
                     /db_xref="CDD:462274"
     CDS             1..192
                     /gene="DDIT4"
                     /coded_by="XM_041468111.1:65..643"
                     /db_xref="GeneID:121353898"
ORIGIN      
        1 mpglwerlag gergrletsd ceslgsasgs egdaeyaegv slpdmdlell hdpedellca
       61 nlldvvqaal graplgakrr srllmpaqlq aqvrtellrl acsepcglrg alldlcvehg
      121 kachdvghia adpavvptfq ltlvlrldsr lwpkiqglfa sgpafaplkl stgfrvmkkk
      181 lysseqllie ec
//
LOCUS       XP_041324046             440 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium uniporter protein, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324046
VERSION     XP_041324046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468112.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 22% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="calcium uniporter protein, mitochondrial"
                     /calculated_mol_wt=48693
     Region          207..409
                     /region_name="MCU"
                     /note="Mitochondrial calcium uniporter; pfam04678"
                     /db_xref="CDD:461389"
     CDS             1..440
                     /gene="MCU"
                     /coded_by="XM_041468112.1:1..1323"
                     /db_xref="GeneID:121353900"
ORIGIN      
        1 mqiiiemlnv giwkdtppth gpapsrtlps lapprgapae efpcprartr prppanllsg
       61 pptrsapigc aspgagrrsa vigqrcrlap plalgaagrg ggaggaeppp gaapaptera
      121 asasspvlpr lpslpaplkv hqrlspwqsv rvvycstvvp sdevtvvyqn glpvisvslp
      181 srrercqftl kpisdsvgvf lqqlraedrg idrvaiysad gtrvasstgi dllllddfkl
      241 iindvsyhvr ppkrellshe nattlndvkt lvqqlytals ieehqlnkek eligrleqlk
      301 eqlaplekvr melsrkaekr ttlvlwggla ymatqfgila rltwweyswd imepvtyfit
      361 ygsamamyay fvmtrqeyvy pdardrqyll ffhkgakktr fdlekynqlk daiaqaeldl
      421 krlrdplqvh lpiqqisekd
//
LOCUS       XP_041324048             437 aa            linear   VRT 06-MAY-2021
DEFINITION  testican-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324048
VERSION     XP_041324048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..437
                     /product="testican-2"
                     /calculated_mol_wt=46851
     Region          162..195
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          212..323
                     /region_name="EFh_SPARC_EC"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted protein acidic and rich in cysteine
                     (SPARC)-like proteins; cl25349"
                     /db_xref="CDD:330171"
     Region          259..290
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320009"
     Site            order(271,275,282,303,305,307,314)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320009"
     Region          291..321
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320009"
     Region          326..389
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(330,345,363,367)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     CDS             1..437
                     /gene="SPOCK2"
                     /coded_by="XM_041468114.1:107..1420"
                     /db_xref="GeneID:121353901"
ORIGIN      
        1 mgaeagpvlr pcpavpaapp prcrragaag aaagpgpaag patgpgpaaa gespgnfmed
       61 eqwlssisqy ggrikhwnrf rdeveddyik swednqpgde aldttkdpcq kvkcsrhkvc
      121 vaqgyqramc isrkklehri kplgpkahgg ckpchaapva avcgsdghty ssackleqqa
      181 claskqltvr cegqcpcptp hspagdskqe lctgqdladl gdrlrdwfql lrenakqngs
      241 gglpasptsa lersvaatck eavgwmfarl dtsgdlflea aelaainldk yevciraffn
      301 scdtskdgrv sapewcfcfw rekppclrel ekiqiqeatk kklgtfipsc dedgyyrraq
      361 cepgggecwc vdqhgaeltg trghgspdcd eatgfsgdfg ssvgwedeee kepeeageeg
      421 eeeegeageg ddggyiw
//
LOCUS       XP_041324049             437 aa            linear   VRT 06-MAY-2021
DEFINITION  testican-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324049
VERSION     XP_041324049.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468115.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..437
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..437
                     /product="testican-2"
                     /calculated_mol_wt=46851
     Region          162..195
                     /region_name="KAZAL_FS"
                     /note="Kazal type serine protease inhibitors and
                     follistatin-like domains. Kazal inhibitors inhibit serine
                     proteases, such as, trypsin, chyomotrypsin, avian
                     ovomucoids, and elastases. The inhibitory domain has one
                     reactive site peptide bond, which serves the...; cd00104"
                     /db_xref="CDD:238052"
     Region          212..323
                     /region_name="EFh_SPARC_EC"
                     /note="EF-hand, extracellular calcium-binding (EC) motif,
                     found in secreted protein acidic and rich in cysteine
                     (SPARC)-like proteins; cl25349"
                     /db_xref="CDD:330171"
     Region          259..290
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320009"
     Site            order(271,275,282,303,305,307,314)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:320009"
     Region          291..321
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320009"
     Region          326..389
                     /region_name="Thyroglobulin_1"
                     /note="Thyroglobulin type-1 repeat; pfam00086"
                     /db_xref="CDD:459665"
     Site            order(330,345,363,367)
                     /site_type="active"
                     /note="protease interaction site [active]"
                     /db_xref="CDD:238114"
     CDS             1..437
                     /gene="SPOCK2"
                     /coded_by="XM_041468115.1:111..1424"
                     /db_xref="GeneID:121353901"
ORIGIN      
        1 mgaeagpvlr pcpavpaapp prcrragaag aaagpgpaag patgpgpaaa gespgnfmed
       61 eqwlssisqy ggrikhwnrf rdeveddyik swednqpgde aldttkdpcq kvkcsrhkvc
      121 vaqgyqramc isrkklehri kplgpkahgg ckpchaapva avcgsdghty ssackleqqa
      181 claskqltvr cegqcpcptp hspagdskqe lctgqdladl gdrlrdwfql lrenakqngs
      241 gglpasptsa lersvaatck eavgwmfarl dtsgdlflea aelaainldk yevciraffn
      301 scdtskdgrv sapewcfcfw rekppclrel ekiqiqeatk kklgtfipsc dedgyyrraq
      361 cepgggecwc vdqhgaeltg trghgspdcd eatgfsgdfg ssvgwedeee kepeeageeg
      421 eeeegeageg ddggyiw
//
LOCUS       XP_041324050             341 aa            linear   VRT 06-MAY-2021
DEFINITION  NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324050
VERSION     XP_041324050.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468116.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="NAD(P)H pyrophosphatase NUDT13, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=38165
     Region          36..336
                     /region_name="NPY1"
                     /note="NADH pyrophosphatase NudC, Nudix superfamily
                     [Nucleotide transport and metabolism]; COG2816"
                     /db_xref="CDD:442065"
     CDS             1..341
                     /gene="NUDT13"
                     /coded_by="XM_041468116.1:149..1174"
                     /db_xref="GeneID:121353902"
ORIGIN      
        1 maavyqalhr gvsslacrlh styvrkmryl nqlkeddslc rqaqtsgtfy lfhnlspflq
       61 kvgkkylvpq lsaaemrqil eklqeaeqwm eksvligcsd ehrprfaldl galdksvies
      121 elqgsftdlr kalfvvdgkd spllasaqsl lrwhdshqyc sktgqptekn pagskrvcha
      181 sgvtyypqts pvvitlvsdg srcllarqps fppgmftals gfcdmgenve eavrrevaee
      241 vgleveslry sasqhwpfps sslmiachal vrapraeinm dtleleearw fglgeivegl
      301 krepssskqd dgsflpwfpp kqaiahqlih ewlqqhtaqt d
//
LOCUS       XP_041324051             341 aa            linear   VRT 06-MAY-2021
DEFINITION  NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324051
VERSION     XP_041324051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="NAD(P)H pyrophosphatase NUDT13, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=38165
     Region          36..336
                     /region_name="NPY1"
                     /note="NADH pyrophosphatase NudC, Nudix superfamily
                     [Nucleotide transport and metabolism]; COG2816"
                     /db_xref="CDD:442065"
     CDS             1..341
                     /gene="NUDT13"
                     /coded_by="XM_041468117.1:137..1162"
                     /db_xref="GeneID:121353902"
ORIGIN      
        1 maavyqalhr gvsslacrlh styvrkmryl nqlkeddslc rqaqtsgtfy lfhnlspflq
       61 kvgkkylvpq lsaaemrqil eklqeaeqwm eksvligcsd ehrprfaldl galdksvies
      121 elqgsftdlr kalfvvdgkd spllasaqsl lrwhdshqyc sktgqptekn pagskrvcha
      181 sgvtyypqts pvvitlvsdg srcllarqps fppgmftals gfcdmgenve eavrrevaee
      241 vgleveslry sasqhwpfps sslmiachal vrapraeinm dtleleearw fglgeivegl
      301 krepssskqd dgsflpwfpp kqaiahqlih ewlqqhtaqt d
//
LOCUS       XP_041324052             278 aa            linear   VRT 06-MAY-2021
DEFINITION  NAD(P)H pyrophosphatase NUDT13, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324052
VERSION     XP_041324052.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468118.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..278
                     /product="NAD(P)H pyrophosphatase NUDT13, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=30461
     Region          36..>224
                     /region_name="NPY1"
                     /note="NADH pyrophosphatase NudC, Nudix superfamily
                     [Nucleotide transport and metabolism]; COG2816"
                     /db_xref="CDD:442065"
     CDS             1..278
                     /gene="NUDT13"
                     /coded_by="XM_041468118.1:120..956"
                     /db_xref="GeneID:121353902"
ORIGIN      
        1 maavyqalhr gvsslacrlh styvrkmryl nqlkeddslc rqaqtsgtfy lfhnlspflq
       61 kvgkkylvpq lsaaemrqil eklqeaeqwm eksvligcsd ehrprfaldl galdksvies
      121 elqgsftdlr kalfvvdgkd spllasaqsl lrwhdshqyc sktgqptekn pagskrvcha
      181 sgvtyypqts pvvitlvsdg srcllarqps fppgmftals gfcdmdgakn vsgayqrlmn
      241 lmehpaskcf qdstagapag gnersclflg tvcdavla
//
LOCUS       XP_041324053             470 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: neuropeptide FF receptor 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324053
VERSION     XP_041324053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468119.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..470
                     /product="LOW QUALITY PROTEIN: neuropeptide FF receptor 1"
                     /calculated_mol_wt=52327
     Region          110..405
                     /region_name="7tmA_NPFFR1"
                     /note="neuropeptide FF receptor 1, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15981"
                     /db_xref="CDD:320647"
     Region          110..136
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320647"
     Region          143..169
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320647"
     Site            order(165,168..169,181..186,188..189,192,235,237..241,278,
                     281..283,285..287,289..290,348,351..352,354..355,358,
                     372..373,375..377,380,383..384)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320647"
     Region          181..211
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320647"
     Region          222..243
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320647"
     Region          278..307
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320647"
     Region          328..358
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320647"
     Region          373..398
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320647"
     CDS             1..470
                     /gene="NPFFR1"
                     /coded_by="XM_041468119.1:526..1938"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121353903"
ORIGIN      
        1 maiggcfppr plpfsaaage qpqparrhrg ggtglrtgre grgelrslpg qqiasgrsac
       61 taamqppepg ragggpsngt wwpnssashl lrenytflay yqhstpvalm filaytfifl
      121 mcvvgnvlvc fvvvknrqmr tvtnvfllnl aisdllvgif cmpttlvdnl itgwpfdntm
      181 ckmsglvqgm svsasvftlv aiaverfrci vhpfwqkltl rkalltiaii wvlallimcp
      241 aaitltvtre ehhfmvdtyn nsyplyscwe awpetgmrri yttilfshiy vaplalivim
      301 yariafklfk svapahggee pegrrisrrk akvinmliiv alfftiswlp lwtlmlltdy
      361 grlsegqlrl lavyvypfah wlaffnssan piiygyfnen frrgfqevfr aplcslrcqr
      421 gpytprshgr gtlfgarnrv ftrarssdsp avsesgplap rragvpawdg
//
LOCUS       XP_041324054             172 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 20 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324054
VERSION     XP_041324054.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468120.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="leucine-rich repeat-containing protein 20
                     isoform X1"
                     /calculated_mol_wt=19348
     Region          <41..>145
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          41..64
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          65..87
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          88..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..172
                     /gene="LRRC20"
                     /coded_by="XM_041468120.1:91..609"
                     /db_xref="GeneID:121353904"
ORIGIN      
        1 mhrrmgeava rvarkvnetv enkrdslvgi ykamrsvteg ihrislanne lksitsrfvt
       61 tfsqlrelnl agnylhrlpe eitsllhlra idlsrnrfrr fpeplatapa letidleene
      121 iaevptdkla smallrslnl ranpvgpevr llvrplvpfe lllspeepip ka
//
LOCUS       XP_041324055             183 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 20 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324055
VERSION     XP_041324055.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468121.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520319.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="leucine-rich repeat-containing protein 20
                     isoform X2"
                     /calculated_mol_wt=20582
     Region          <26..>156
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          27..47
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          52..75
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          76..98
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          99..121
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          122..145
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..183
                     /gene="LRRC20"
                     /coded_by="XM_041468121.1:93..644"
                     /db_xref="GeneID:121353904"
ORIGIN      
        1 mhrrmgeava rvarkvnetv enkrdsldla ncklmtfpvg iykamrsvte gihrislann
       61 elksitsrfv ttfsqlreln lagnylhrlp eeitsllhlr aidlsrnrfr rfpeplatap
      121 aletidleen eiaevptdkl asmallrsln lranpvgpev rllvrplvpf elllspeepi
      181 pka
//
LOCUS       XP_041324056             207 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121353907, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324056
VERSION     XP_041324056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468122.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520375.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 48% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>207
                     /product="uncharacterized protein LOC121353907"
     Region          1..79
                     /region_name="BRICHOS"
                     /note="BRICHOS domain; pfam04089"
                     /db_xref="CDD:461168"
     Region          158..>205
                     /region_name="BRICHOS"
                     /note="BRICHOS domain; pfam04089"
                     /db_xref="CDD:461168"
     CDS             1..207
                     /gene="LOC121353907"
                     /coded_by="XM_041468122.1:<1..>621"
                     /db_xref="GeneID:121353907"
ORIGIN      
        1 gviatkvtqq ntcyisimnr semplfdnla hlaqesrnli ggfgrstkri tfvtnglvnn
       61 lnsygidita mcsglttyma yevntsqgpq lnlgscitld vlrvvdlkyc igngsvnfpt
      121 qqipsgifnn tqviiggqsq ivtinrqwrv avieqrnitg swktiwnynt gviatkvtqq
      181 nacyisimnr semplfdnla rlaqesr
//
LOCUS       XP_041324057             120 aa            linear   VRT 06-MAY-2021
DEFINITION  telomerase RNA component interacting RNase, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324057
VERSION     XP_041324057.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468123.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520386.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>120
                     /product="telomerase RNA component interacting RNase"
     CDS             1..120
                     /gene="TRIR"
                     /coded_by="XM_041468123.1:47..>406"
                     /db_xref="GeneID:121353908"
ORIGIN      
        1 maargedrea peapsppppg pgggvnvfan dgsflelfkr kmeaeeqqre reaaaaaaea
       61 sgggggtgvg pqrggadgak rsggalsfvg rrrggnklal ktgvvakkqk tdeevgpgsr
//
LOCUS       XP_041324059             165 aa            linear   VRT 06-MAY-2021
DEFINITION  ATPase GET3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324059
VERSION     XP_041324059.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468125.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520386.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="ATPase GET3"
                     /calculated_mol_wt=17480
     Region          38..>154
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     CDS             1..165
                     /gene="GET3"
                     /coded_by="XM_041468125.1:40..537"
                     /db_xref="GeneID:121353909"
ORIGIN      
        1 maaaaggwta egpeefedap dvepleptla niieqrslkw ifvggkggvg kttcscslav
       61 qlsrvresvl iistdpahni sdafdqkfsk vptkvtgydn lfameidpsl gvaelpdeff
      121 eednvlsmgk kmmqeamsaf pgideamsya evmrwgggag grggv
//
LOCUS       XP_041324060             843 aa            linear   VRT 06-MAY-2021
DEFINITION  glycogen phosphorylase, brain form [Pyrgilauda ruficollis].
ACCESSION   XP_041324060
VERSION     XP_041324060.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468126.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..843
                     /product="glycogen phosphorylase, brain form"
                     /calculated_mol_wt=96620
     Region          29..828
                     /region_name="GT35_Glycogen_Phosphorylase"
                     /note="glycogen phosphorylase and similar proteins;
                     cd04300"
                     /db_xref="CDD:340853"
     Site            order(29,31,33..34,36..38,61..63,194,283,286)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340853"
     Site            order(89,91,135..137,281,284,286,293,340,342,378..379,383,
                     485,492,569..570,572..575,609,614,616,650..651,673,
                     675..678,681)
                     /site_type="active"
                     /note="active site pocket [active]"
                     /db_xref="CDD:340853"
     CDS             1..843
                     /gene="PYGB"
                     /coded_by="XM_041468126.1:73..2604"
                     /db_xref="GeneID:121353910"
ORIGIN      
        1 maaplsdgdr rkqisvrgia glgdvaevrk sfnrhlhftl vkdrnvatpr dyyfalahtv
       61 rdhlvgrwir tqqhyyerdp kriyylslef ymgrtlqntm vnlglqnacd eaiyqlgldl
      121 eeleeieeda glgngglgrl aacfldsmat lglaaygygi ryefgifnqk ivdgwqveea
      181 ddwlrygnpw ekarpeymlp vhfygrveht pegvkwidtq vvlampydtp vpgyknntvn
      241 tmrlwsakap ndfnlqefnm gdyieavldr nlaenisrvl ypndnffegk elrlkqeyfv
      301 vaatlqdiir rfksskfgcr dpvrtcfetf pdkvaiqlnd thpalsipel mrilvdvekv
      361 dwdkaweitk rtcaytnhtv lpealerwpv smfekllprh leiiyalnqm hldrvaalyp
      421 gdidrlrrms vieegdckri nmahlcvigs havngvarih sdivknsvfk dfyelepekf
      481 qnktngitpr rwlllcnpgl adiiaekige gfitdlsqlk kllefidnet firdvakvkq
      541 enklkfaayl eeqykvkinp msmfdvqvkr iheykrqlln clhaitlynr ircnpsksfv
      601 prtimiggka apgyhmakmi iklitsigev inndpyvgdk lkviflenyr vslaekvipa
      661 adlsqqista gteasgtgnm kfmvngalti gtmdganvem aeeageenlf ifgmrvedve
      721 aldrkgynar eyyeslpelr qaidqitsgf fsprdpgcfk dvvnmlmyhd rfkvfadyea
      781 yikcqgqvdq lfmdprewtr kvirniacsg kfssdrtite yareiwgvep sataipppnl
      841 prn
//
LOCUS       XP_041324061             674 aa            linear   VRT 06-MAY-2021
DEFINITION  acetyl-coenzyme A synthetase 2-like, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324061
VERSION     XP_041324061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468127.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..674
                     /product="acetyl-coenzyme A synthetase 2-like,
                     mitochondrial"
                     /calculated_mol_wt=74346
     Region          45..654
                     /region_name="ACS"
                     /note="Acetyl-CoA synthetase (also known as acetate-CoA
                     ligase and acetyl-activating enzyme); cd05966"
                     /db_xref="CDD:341270"
     Site            order(183..185,211,214,216,322,327..328,350..352,376..377,
                     380,403..406,428..433,520,532,535,543..546,604,609..610)
                     /site_type="active"
                     /db_xref="CDD:341270"
     Site            order(183..185,211,214,216,322,328,350..352,376..377,380,
                     543..545,604,609)
                     /site_type="other"
                     /note="CoA binding site [chemical binding]"
                     /db_xref="CDD:341270"
     Site            order(278,281..286,288..289)
                     /site_type="other"
                     /note="acyl-activating enzyme (AAE) consensus motif"
                     /db_xref="CDD:341270"
     Site            order(327..328,403..406,428..433,520,532,535,546)
                     /site_type="other"
                     /note="AMP binding site [chemical binding]"
                     /db_xref="CDD:341270"
     Site            order(327..328,403..404,431)
                     /site_type="other"
                     /note="acetate binding site [chemical binding]"
                     /db_xref="CDD:341270"
     CDS             1..674
                     /gene="ACSS1"
                     /coded_by="XM_041468127.1:87..2111"
                     /db_xref="GeneID:121353911"
ORIGIN      
        1 malaaarart lralslprrp grvpvaarsc csqagapgal ppggyrawqe raardpagfw
       61 advargwlrw dspfhtacqp getagsarwf lggrlnvsvn cldqhveksp nrvaliwerd
      121 epgtavhvty relqdltcrl antlkkygiq kgdrvaiyms vsplsvaaml acarigavht
      181 vvfagfsaes lagrimdsgc kavitynqgv rggrtielka tvdeavkncp sikhvfvaqr
      241 tdnkvhmgdr dipleeemtk adsicipesm dsedvlfmly tsgstgkpkg ivhtqagyll
      301 yaalthkyvf dyqqgdvfgc vadigwitgh syvvygplcn gatsvlfest pvypdpgryw
      361 evvqrlkinq fygaptairl llnygeewvk kydrsslkvl gsvgepinke awqwfyevvg
      421 egrcalvdtw wqtetggici aprpseekae ivpamamrpf fgivpvlmde ngeviegndv
      481 sgalciaqpw pgmartihgd hqrfidayfk aypgyyftgd gayrshkgyy qitgrmddvi
      541 nisghrlgta eiedamadhp evpetavvgy phkikgegaf afivlreeta hadhikeelk
      601 tivaskiaky avpdhilvvk rlpktrsgki mrrllrkvvt eqssnmgdvt tlddpsvvke
      661 ildayqkyke knss
//
LOCUS       XP_041324062            1333 aa            linear   VRT 06-MAY-2021
DEFINITION  tau-tubulin kinase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324062
VERSION     XP_041324062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468128.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1333
                     /product="tau-tubulin kinase 1 isoform X1"
                     /calculated_mol_wt=147020
     Region          33..294
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(40..43,46,48,61,63,91,107..110,154,158..159,161,
                     175..176)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271032"
     Region          <1240..>1332
                     /region_name="PRK10905"
                     /note="cell division protein DamX; Validated"
                     /db_xref="CDD:236792"
     CDS             1..1333
                     /gene="TTBK1"
                     /coded_by="XM_041468128.1:276..4277"
                     /db_xref="GeneID:121353912"
ORIGIN      
        1 mqclaavikd epnmsgggeq vdilptnyvv kdrwkvlkki ggggfgeiye amdlltrenv
       61 alkvesaqqp kqvlkmevav lkklqgkdhv crfigcgrne kfnyvvmqlq grnladlrrs
      121 qprgtftlst tlrlgkqile sieaihsvgf lhrdikpsnf amgrlpstyr kcymldfgla
      181 rqytnttgev rpprnvagfr gtvryasvna hknremgrhd dlwslfymlv efavgqlpwr
      241 kikdkeqvgm ikekyehrml lkhmpsefhl fldhiasldy ftkpdyqlim svfensmker
      301 giteneafdw ekagtdills tststppqqn trqtaamfgv vnvtpvpgdl lrentedvlq
      361 gehlsdqena ppilsgrpve glgqapntaf negevweetd vnrnklrisi sktqcmveee
      421 qrngvcpssp vrvppespta qvrslryrrv nspeserlst adgkadpher rsrmdipgsp
      481 srlvcssqpa qmlsidtgqa drqasgrmdv sasveheals nafrsvplae eedfdskewv
      541 iidketelkd fhpgaepsts gttdeepeel rpiedgeerr rlgadaavrp kthdgrsrgm
      601 lpvteedssh rhegpsqtvs dsrheqqtgs pahsplhsap alrqrrrese ptgpqrqaym
      661 lksfeinglp kavplslpyq dfrkdmcnyw ekpklsqrik kvdfsnivlt apckplepyk
      721 emngkeeeee eeeeedyeee edeqdegeee eegneidmhs dsssdlsqks tersqecaps
      781 tlladdqkgs kgrastadgd leleegsktl vlfspgdlkk spvaadlppe vdlgtlaalt
      841 pqserpqpmg sqldvsepgt lssvlksepk ppvavatass pftkvertfv hiaekthlnv
      901 msssgqlmrh eeycppgqfe eviieeeled nlvlvengsi hsglegaete scalsanhve
      961 ttsetvgeqp alpngmpklp edkpelsgka vlsldleepd kvatrepgle kaasatehlk
     1021 raetlletpq qgprrplgpr yrsripilfs eedtgsdlst slsakerlyk rakqpdlarl
     1081 vmekrqsrll rlasgasssa sssderrras etlsatgsee dthdsddsip rkgekkaall
     1141 gredraistr sriprpivpv ktplevarse ssvaaamagl gsspqdaaaa crlqtqraag
     1201 svpyegrttq vqsrlpssps stslpprsss qrssgasprs pvlpsrnpst sprsqllprr
     1261 espspcrqhk pgtapqrvpp sprpqpsaqa pastgdslps pgmakkrqrg ktqtqspatk
     1321 gkqvsleska aar
//
LOCUS       XP_041324063            1333 aa            linear   VRT 06-MAY-2021
DEFINITION  tau-tubulin kinase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324063
VERSION     XP_041324063.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468129.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1333
                     /product="tau-tubulin kinase 1 isoform X1"
                     /calculated_mol_wt=147020
     Region          33..294
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(40..43,46,48,61,63,91,107..110,154,158..159,161,
                     175..176)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271032"
     Region          <1240..>1332
                     /region_name="PRK10905"
                     /note="cell division protein DamX; Validated"
                     /db_xref="CDD:236792"
     CDS             1..1333
                     /gene="TTBK1"
                     /coded_by="XM_041468129.1:130..4131"
                     /db_xref="GeneID:121353912"
ORIGIN      
        1 mqclaavikd epnmsgggeq vdilptnyvv kdrwkvlkki ggggfgeiye amdlltrenv
       61 alkvesaqqp kqvlkmevav lkklqgkdhv crfigcgrne kfnyvvmqlq grnladlrrs
      121 qprgtftlst tlrlgkqile sieaihsvgf lhrdikpsnf amgrlpstyr kcymldfgla
      181 rqytnttgev rpprnvagfr gtvryasvna hknremgrhd dlwslfymlv efavgqlpwr
      241 kikdkeqvgm ikekyehrml lkhmpsefhl fldhiasldy ftkpdyqlim svfensmker
      301 giteneafdw ekagtdills tststppqqn trqtaamfgv vnvtpvpgdl lrentedvlq
      361 gehlsdqena ppilsgrpve glgqapntaf negevweetd vnrnklrisi sktqcmveee
      421 qrngvcpssp vrvppespta qvrslryrrv nspeserlst adgkadpher rsrmdipgsp
      481 srlvcssqpa qmlsidtgqa drqasgrmdv sasveheals nafrsvplae eedfdskewv
      541 iidketelkd fhpgaepsts gttdeepeel rpiedgeerr rlgadaavrp kthdgrsrgm
      601 lpvteedssh rhegpsqtvs dsrheqqtgs pahsplhsap alrqrrrese ptgpqrqaym
      661 lksfeinglp kavplslpyq dfrkdmcnyw ekpklsqrik kvdfsnivlt apckplepyk
      721 emngkeeeee eeeeedyeee edeqdegeee eegneidmhs dsssdlsqks tersqecaps
      781 tlladdqkgs kgrastadgd leleegsktl vlfspgdlkk spvaadlppe vdlgtlaalt
      841 pqserpqpmg sqldvsepgt lssvlksepk ppvavatass pftkvertfv hiaekthlnv
      901 msssgqlmrh eeycppgqfe eviieeeled nlvlvengsi hsglegaete scalsanhve
      961 ttsetvgeqp alpngmpklp edkpelsgka vlsldleepd kvatrepgle kaasatehlk
     1021 raetlletpq qgprrplgpr yrsripilfs eedtgsdlst slsakerlyk rakqpdlarl
     1081 vmekrqsrll rlasgasssa sssderrras etlsatgsee dthdsddsip rkgekkaall
     1141 gredraistr sriprpivpv ktplevarse ssvaaamagl gsspqdaaaa crlqtqraag
     1201 svpyegrttq vqsrlpssps stslpprsss qrssgasprs pvlpsrnpst sprsqllprr
     1261 espspcrqhk pgtapqrvpp sprpqpsaqa pastgdslps pgmakkrqrg ktqtqspatk
     1321 gkqvsleska aar
//
LOCUS       XP_041324064            1118 aa            linear   VRT 06-MAY-2021
DEFINITION  tau-tubulin kinase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324064
VERSION     XP_041324064.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468130.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1118
                     /product="tau-tubulin kinase 1 isoform X2"
                     /calculated_mol_wt=122834
     Region          <1..79
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..1118
                     /gene="TTBK1"
                     /coded_by="XM_041468130.1:174..3530"
                     /db_xref="GeneID:121353912"
ORIGIN      
        1 mgrhddlwsl fymlvefavg qlpwrkikdk eqvgmikeky ehrmllkhmp sefhlfldhi
       61 asldyftkpd yqlimsvfen smkergiten eafdwekagt dillststst ppqqntrqta
      121 amfgvvnvtp vpgdllrent edvlqgehls dqenappils grpveglgqa pntafnegev
      181 weetdvnrnk lrisisktqc mveeeqrngv cpsspvrvpp esptaqvrsl ryrrvnspes
      241 erlstadgka dpherrsrmd ipgspsrlvc ssqpaqmlsi dtgqadrqas grmdvsasve
      301 healsnafrs vplaeeedfd skewviidke telkdfhpga epstsgttde epeelrpied
      361 geerrrlgad aavrpkthdg rsrgmlpvte edsshrhegp sqtvsdsrhe qqtgspahsp
      421 lhsapalrqr rreseptgpq rqaymlksfe inglpkavpl slpyqdfrkd mcnywekpkl
      481 sqrikkvdfs nivltapckp lepykemngk eeeeeeeeee dyeeeedeqd egeeeeegne
      541 idmhsdsssd lsqkstersq ecapstllad dqkgskgras tadgdlelee gsktlvlfsp
      601 gdlkkspvaa dlppevdlgt laaltpqser pqpmgsqldv sepgtlssvl ksepkppvav
      661 atasspftkv ertfvhiaek thlnvmsssg qlmrheeycp pgqfeeviie eelednlvlv
      721 engsihsgle gaetescals anhvettset vgeqpalpng mpklpedkpe lsgkavlsld
      781 leepdkvatr epglekaasa tehlkraetl letpqqgprr plgpryrsri pilfseedtg
      841 sdlstslsak erlykrakqp dlarlvmekr qsrllrlasg asssasssde rrrasetlsa
      901 tgseedthds ddsiprkgek kaallgredr aistrsripr pivpvktple varsessvaa
      961 amaglgsspq daaaacrlqt qraagsvpye grttqvqsrl psspsstslp prsssqrssg
     1021 asprspvlps rnpstsprsq llprrespsp crqhkpgtap qrvppsprpq psaqapastg
     1081 dslpspgmak krqrgktqtq spatkgkqvs leskaaar
//
LOCUS       XP_041324065             378 aa            linear   VRT 06-MAY-2021
DEFINITION  tubulin--tyrosine ligase [Pyrgilauda ruficollis].
ACCESSION   XP_041324065
VERSION     XP_041324065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="tubulin--tyrosine ligase"
                     /calculated_mol_wt=43372
     Region          81..367
                     /region_name="TTL"
                     /note="Tubulin-tyrosine ligase family; pfam03133"
                     /db_xref="CDD:397308"
     CDS             1..378
                     /gene="TTL"
                     /coded_by="XM_041468131.1:238..1374"
                     /db_xref="GeneID:121353913"
ORIGIN      
        1 mytfvvrdeg ssvytevsrl llasgqwrrl rrdnprfnlm lgernrlpfg rlghepglvq
       61 lvnyyrgadk lcrkaslvkl iktspelses ctwfpesyvi yptnlktpva paqngirhli
      121 nnsrtderev flaaynrrre gkegnvwiak ssagakgegi lisseaaell dfideqgqvh
      181 viqkylenpl llepghrkfd irswvlvdhq yniylyregv lrtssepyns anfqdktchl
      241 tnhciqkeys knygryeegn emffeefnqy lmdalnttle nsillqikhi irsclmciep
      301 aistkhlhyq sfqlfgfdfm vdeelkvwli evngapacaq klyaelcqgi vdvaissvfp
      361 lndtgqkmsq sssifikl
//
LOCUS       XP_041324068             551 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 22 member 7 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324068
VERSION     XP_041324068.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468134.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="solute carrier family 22 member 7 isoform X1"
                     /calculated_mol_wt=61085
     Region          101..504
                     /region_name="MFS_SLC22A7_OAT2"
                     /note="Solute carrier family 22 member 7 (also called
                     Organic anion transporter 2) of the Major Facilitator
                     Superfamily of transporters; cd17447"
                     /db_xref="CDD:341005"
     Site            order(118..119,122..123,126,152,202..203,205..207,210,226,
                     229..230,233,345,348..349,352..354,357,377,381,432..433,
                     437,441,457,460..461,464..465,468)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341005"
     CDS             1..551
                     /gene="SLC22A7"
                     /coded_by="XM_041468134.1:1..1656"
                     /db_xref="GeneID:121353914"
ORIGIN      
        1 mkfedlllet ggfgrfqili lailclprin lpmhfllhnf laatpshhca iphqeafvnl
       61 tmeevllisi prkpdgtfss cemfsqpqfh lllnsslqpe nksiiqhcqh gwvydhsqft
      121 stistqwdlv ceqrglnqat atfffigvtm gamvfgylsd rfgrktmlql slvcslalgm
      181 lsaasvsytm lavtrtltgv alsglslivl plgmewvdvr hrtftgilss ifwsignmll
      241 alaaylvrew hwllvavtap cllsivclww vpesarwlia kgkvkqahrh llrcarmngr
      301 kdfavspeal trmatdknmg gnysyislfr tpvlrkislc sgvvwfgvaf syygmsmslt
      361 gfglsiylsq fvfgvieipa kmvmyvlvnr igrrqsqawt lilagvciga nivipkpfss
      421 lrsvvaimgk gfseaafttv flytselypt ilrqngmgyt sfmarlggal aplvflldev
      481 wrslpevtyc avavcsgava fllpetlnvr lpegiedvek phpevnffns rvkvppeast
      541 pegvplqall k
//
LOCUS       XP_041324069             542 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 22 member 7 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324069
VERSION     XP_041324069.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468135.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..542
                     /product="solute carrier family 22 member 7 isoform X2"
                     /calculated_mol_wt=59985
     Region          101..504
                     /region_name="MFS_SLC22A7_OAT2"
                     /note="Solute carrier family 22 member 7 (also called
                     Organic anion transporter 2) of the Major Facilitator
                     Superfamily of transporters; cd17447"
                     /db_xref="CDD:341005"
     Site            order(118..119,122..123,126,152,202..203,205..207,210,226,
                     229..230,233,345,348..349,352..354,357,377,381,432..433,
                     437,441,457,460..461,464..465,468)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:341005"
     CDS             1..542
                     /gene="SLC22A7"
                     /coded_by="XM_041468135.1:1..1629"
                     /db_xref="GeneID:121353914"
ORIGIN      
        1 mkfedlllet ggfgrfqili lailclprin lpmhfllhnf laatpshhca iphqeafvnl
       61 tmeevllisi prkpdgtfss cemfsqpqfh lllnsslqpe nksiiqhcqh gwvydhsqft
      121 stistqwdlv ceqrglnqat atfffigvtm gamvfgylsd rfgrktmlql slvcslalgm
      181 lsaasvsytm lavtrtltgv alsglslivl plgmewvdvr hrtftgilss ifwsignmll
      241 alaaylvrew hwllvavtap cllsivclww vpesarwlia kgkvkqahrh llrcarmngr
      301 kdfavspeal trmatdknmg gnysyislfr tpvlrkislc sgvvwfgvaf syygmsmslt
      361 gfglsiylsq fvfgvieipa kmvmyvlvnr igrrqsqawt lilagvciga nivipkpfss
      421 lrsvvaimgk gfseaafttv flytselypt ilrqngmgyt sfmarlggal aplvflldev
      481 wrslpevtyc avavcsgava fllpetlnvr lpegiedvek pqvkvppeas tpegvplqal
      541 lk
//
LOCUS       XP_041324070            1009 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-directed RNA polymerase I subunit RPA2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324070
VERSION     XP_041324070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1009
                     /product="DNA-directed RNA polymerase I subunit RPA2"
                     /calculated_mol_wt=113447
     Region          3..1007
                     /region_name="RNA_pol_B_RPB2"
                     /note="RNA polymerase beta subunit. RNA polymerases
                     catalyse the DNA dependent polymerization of RNA.
                     Prokaryotes contain a single RNA polymerase compared to
                     three in eukaryotes (not including mitochondrial. and
                     chloroplast polymerases). Each RNA polymerase...; cd00653"
                     /db_xref="CDD:238353"
     Region          62..251
                     /region_name="RNA_pol_Rpb2_2"
                     /note="RNA polymerase Rpb2, domain 2; pfam04561"
                     /db_xref="CDD:398318"
     Site            order(361,363..365,367,370,375,536,554..556,558,621..624,
                     627,629..631,766,768,770,792,794,797,800,805,809,826,857,
                     865..867,869,882,885..887,889..890,911..913,917,919..920,
                     922,924..929,931..936,940,987,991,993,995..996,998,
                     1000..1003,1005,1007)
                     /site_type="other"
                     /note="RPB1 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Region          439..497
                     /region_name="RNA_pol_Rpa2_4"
                     /note="RNA polymerase I, Rpa2 specific domain; pfam06883"
                     /db_xref="CDD:462028"
     Site            order(594..595,616,618,639,642,775,788,815..816,818,853,
                     870)
                     /site_type="other"
                     /note="RPB10 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Site            order(627,641,774,859)
                     /site_type="other"
                     /note="RPB11 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Site            order(641..642,646,748,750,775..777,780,782..783,858..865,
                     867)
                     /site_type="other"
                     /note="RPB3 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     Site            order(646,684,686,690..692,694)
                     /site_type="other"
                     /note="RPB12 interaction site [polypeptide binding]"
                     /db_xref="CDD:238353"
     CDS             1..1009
                     /gene="POLR1B"
                     /coded_by="XM_041468136.1:302..3331"
                     /db_xref="GeneID:121353915"
ORIGIN      
        1 mpqgtikqpl gyipimvksk lcnlcgfspq dllqhheeee emggyfiing lekvirmlim
       61 prrnfplamt rhkwknrgpg fteygvvmhc vkdehtainm nlhylengcv mvnfifrkel
      121 fflplgfalr alvnfpdyqi feelvkgred dtfyancite mmravvdagc ltqqnvldyl
      181 gksfrvklnl pewysneqaa dfilsncici hltnriekfy llcmmtqkly afakgecmed
      241 npdslmnhev ltpgqlflmf lkerletwlq svrfvlekra ektdislntd slvkafslap
      301 dftkpfeyll atgnlrsktg lgmlqasglc vvgdklnfir ylshfrcihr gaafsqmrtt
      361 tvrkllpesw gflcpvdtpd gepcglmnhm talceivtem vpvtdippll cslgvtpida
      421 apsqpysecy rvvldgsmvg wverelapei aqtlrrfkit qekrfparae vvlipmtgkp
      481 slypglfift npcrmvrpvr nlsygknewi gtleqifmnv atmesevvpg vtthqelfph
      541 silsvvanli pfsdhnqspr nmyqcqmgkq tmgfpvynyk drsdnklyhl htpqsplvrp
      601 smydyygmds ypvgtnsiva visysgydme damivnkssw qrgfaygsvi kaesidlslk
      661 asragdnlvf girpgdpnvg ekldadglpf vgsilqpgdp fysfmnlntg etftvyypsk
      721 evgivdnvrl csndrgtgkf kkacitvrvp rnptigdkfa srhgqkgils qlwpvedmpf
      781 tengmvpdil fnphgfpsrm tigmliesma gksaalhgis ydatpftfte kksalkyfge
      841 tlasagynff gtekmysgis gveleaeifv gvvyyqrlrh mvsdkfqvrt tgprdavtnq
      901 pvkgrnvegg irfgemerda llahgtsfll qdrlfncsdg svayvctscg smtspvlekl
      961 shsvtssrry scsicsevda ievvpvphvf ryfvaelaam niktklnve
//
LOCUS       XP_041324071             879 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphofurin acidic cluster sorting protein 1-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324071
VERSION     XP_041324071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="phosphofurin acidic cluster sorting protein
                     1-like isoform X1"
                     /calculated_mol_wt=97078
     Region          464..876
                     /region_name="Pacs-1"
                     /note="PACS-1 cytosolic sorting protein; pfam10254"
                     /db_xref="CDD:463027"
     CDS             1..879
                     /gene="LOC121353916"
                     /coded_by="XM_041468137.1:87..2726"
                     /db_xref="GeneID:121353916"
ORIGIN      
        1 mavagplsvp vpmnlfatwe idrsapscvp rlcslrlkkl tvlkeldkel ssvliavkiq
       61 gskrvlrsne yilppgglme teleltfslq yphflkrdgn klqimlqrrk ryknrtilgy
      121 ktlavgiinm aevmqhptdg gqllglhsnm kdvnirvaei siyslssqpi dhedgnvpsg
      181 pkikasdrsp didnyseeed dsfsseqeas ddavqgqdlf deeddlrktk ksrrkmsrtt
      241 sisrqpnfkq kfvallrrfr vteevldsdp vdqtqeveed lgllydslee cnnsdsgpem
      301 ednesvhstp kptlrrffeg vshsgsqtei gslhsqkgqd qesgspgead kqkpgpqrpq
      361 eeqgtevpav eltseescsr ltpteaamre gsvdrlallg sgskaelpsa vspskaeskq
      421 lwrprstsvk drqsskvqgg rassldsess pdswhntqvp rksvydqlnq ilvsdeqlpe
      481 sivlvnvaew qgqyvseqlq ahkqlvvstc svadiqaafn ttvsriqryc ncnshmpppv
      541 kvvvagdqsy lsvvlrffve qlasktpdwl nylrfllvpl gshplakyla svdnkystlf
      601 ldtawrelfs raepptadtv diagrvaqfi agaslshqlp iseamltykq kspdedscqk
      661 fvpfvgvvkv glveqsfsas vdsddatvct pssllsstpv snasvsygke tictpppsps
      721 vcsslsgags pspglevmgl qvdywttqgl drkkegdkre tgikntlksn frslqvsrip
      781 stgelvppst mamtvvtkek nkkvmflskk pkekdlehks qviegitrli ctakhqntml
      841 rvsidgvewn dvkffqlaaq wpthvkylpv gifgysksv
//
LOCUS       XP_041324072             801 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphofurin acidic cluster sorting protein 1-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324072
VERSION     XP_041324072.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468138.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..801
                     /product="phosphofurin acidic cluster sorting protein
                     1-like isoform X2"
                     /calculated_mol_wt=88581
     Region          386..798
                     /region_name="Pacs-1"
                     /note="PACS-1 cytosolic sorting protein; pfam10254"
                     /db_xref="CDD:463027"
     CDS             1..801
                     /gene="LOC121353916"
                     /coded_by="XM_041468138.1:160..2565"
                     /db_xref="GeneID:121353916"
ORIGIN      
        1 meteleltfs lqyphflkrd gnklqimlqr rkryknrtil gyktlavgii nmaevmqhpt
       61 dggqllglhs nmkdvnirva eisiyslssq pidhedgnvp sgpkikasdr spdidnysee
      121 eddsfsseqe asddavqgqd lfdeeddlrk tkksrrkmsr ttsisrqpnf kqkfvallrr
      181 frvteevlds dpvdqtqeve edlgllydsl eecnnsdsgp emednesvhs tpkptlrrff
      241 egvshsgsqt eigslhsqkg qdqesgspge adkqkpgpqr pqeeqgtevp aveltseesc
      301 srltpteaam regsvdrlal lgsgskaelp savspskaes kqlwrprsts vkdrqsskvq
      361 ggrassldse sspdswhntq vprksvydql nqilvsdeql pesivlvnva ewqgqyvseq
      421 lqahkqlvvs tcsvadiqaa fnttvsriqr ycncnshmpp pvkvvvagdq sylsvvlrff
      481 veqlasktpd wlnylrfllv plgshplaky lasvdnkyst lfldtawrel fsraepptad
      541 tvdiagrvaq fiagaslshq lpiseamlty kqkspdedsc qkfvpfvgvv kvglveqsfs
      601 asvdsddatv ctpssllsst pvsnasvsyg ketictppps psvcsslsga gspspglevm
      661 glqvdywttq gldrkkegdk retgikntlk snfrslqvsr ipstgelvpp stmamtvvtk
      721 eknkkvmfls kkpkekdleh ksqviegitr lictakhqnt mlrvsidgve wndvkffqla
      781 aqwpthvkyl pvgifgysks v
//
LOCUS       XP_041324073             294 aa            linear   VRT 06-MAY-2021
DEFINITION  glycine N-methyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041324073
VERSION     XP_041324073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468139.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="glycine N-methyltransferase"
                     /calculated_mol_wt=32917
     Region          37..174
                     /region_name="UbiG"
                     /note="2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,
                     4-benzoquinol methylase [Coenzyme transport and
                     metabolism]; COG2227"
                     /db_xref="CDD:441829"
     CDS             1..294
                     /gene="GNMT"
                     /coded_by="XM_041468139.1:94..978"
                     /db_xref="GeneID:121353917"
ORIGIN      
        1 mvdsvyrtrs lgvaaeglpd qyadgraarv wqlyigdtrg rtaeyrswll allrqhrcrs
       61 vldvacgtgv dsimlleegf qvtsvdasdk mlkyalkerw errkeepfdr wvieeanwlt
      121 lekdlekpgd gfdaviclgn sfahlpdfkg dqsdhklalr niasmvrpgg vlvidhrnyd
      181 hilatgcapp gkniyyksdl tkdittsvll vnnkahmvtl dytvqvppte agadpelskf
      241 rlsyyphrle aftallkgaf qgkcqhsvlg dfqpytpgqa hvpcyfihvv kktg
//
LOCUS       XP_041324074             256 aa            linear   VRT 06-MAY-2021
DEFINITION  protein canopy homolog 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324074
VERSION     XP_041324074.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468140.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="protein canopy homolog 3"
                     /calculated_mol_wt=28282
     Region          32..181
                     /region_name="DUF3456"
                     /note="TLR4 regulator and MIR-interacting MSAP; pfam11938"
                     /db_xref="CDD:463404"
     CDS             1..256
                     /gene="CNPY3"
                     /coded_by="XM_041468140.1:28..798"
                     /db_xref="GeneID:121353918"
ORIGIN      
        1 maaaagaall mllmaaalae gddsdwvrlp skcevckyva velksafeet gktkevidtk
       61 ygfldgkgsa vkytqsdirl ievtenickr lldynlhker sgsnrfakgm setfetlhnl
      121 vhkgvkvvmd ipyelwnets aevadlkkqc dvlveeyedv iedwyrhhqt edlsqflcan
      181 hvlkgkdtsc laekwtgkkg dlasvgekqs kkksgkkkkk gqkderegaa slpdtgeale
      241 gvqeqaplth spadel
//
LOCUS       XP_041324075             611 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            delta isoform isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324075
VERSION     XP_041324075.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468141.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..611
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit delta isoform isoform X1"
                     /calculated_mol_wt=70821
     Region          119..522
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..611
                     /gene="PPP2R5D"
                     /coded_by="XM_041468141.1:119..1954"
                     /db_xref="GeneID:121353919"
ORIGIN      
        1 mpyklkkeke spkstksttk pgssssssss sgkdggaens eeqaqqpqqq pqqpqqqpqq
       61 qptsnkrpsn sappptqlnk ikysggpqiv kkerrhsssr fnlsknrelq klpalkdapp
      121 hereelfiqk lrqccvlfdf isdplsdlkf kevkraglne mveyithnrd vvteaiypea
      181 vimfsvnlfr tlppssnptg aefdpeedep tleaawphlq lvyefflrfl espdfqpnva
      241 kkyidqkfvl slldlfdsed prerdflkti lhriygkflg lrayvrrqin nifyrfiyet
      301 ehhngiaell eilgsiingf alplkeehkm flirvllplh kvkslsvyhp qlaycvvqfl
      361 ekdssltepv ivgllkfwpk thspkevmfl neleeildvi epsefvkvme plfrqlakcv
      421 ssphfqvaer alyywnneyi mslisdnaak ilpimfpaly knskshwnkt ihgliynalk
      481 lfmemnqklf ddctqqykae kqkgrfrmke reemwqkiee larlnpqypm yyaplplpsv
      541 ccmetetpta ediqllkktv eteavqmlkd ikkdkvllrr kselpqdvyt ikaleahkra
      601 eefltssqea l
//
LOCUS       XP_041324077             610 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            delta isoform isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324077
VERSION     XP_041324077.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468143.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..610
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit delta isoform isoform X2"
                     /calculated_mol_wt=70693
     Region          118..521
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..610
                     /gene="PPP2R5D"
                     /coded_by="XM_041468143.1:119..1951"
                     /db_xref="GeneID:121353919"
ORIGIN      
        1 mpyklkkeke spkstksttk pgssssssss sgkdggaens eeaqqpqqqp qqpqqqpqqq
       61 ptsnkrpsns appptqlnki kysggpqivk kerrhsssrf nlsknrelqk lpalkdapph
      121 ereelfiqkl rqccvlfdfi sdplsdlkfk evkraglnem veyithnrdv vteaiypeav
      181 imfsvnlfrt lppssnptga efdpeedept leaawphlql vyefflrfle spdfqpnvak
      241 kyidqkfvls lldlfdsedp rerdflktil hriygkflgl rayvrrqinn ifyrfiyete
      301 hhngiaelle ilgsiingfa lplkeehkmf lirvllplhk vkslsvyhpq laycvvqfle
      361 kdssltepvi vgllkfwpkt hspkevmfln eleeildvie psefvkvmep lfrqlakcvs
      421 sphfqvaera lyywnneyim slisdnaaki lpimfpalyk nskshwnkti hgliynalkl
      481 fmemnqklfd dctqqykaek qkgrfrmker eemwqkieel arlnpqypmy yaplplpsvc
      541 cmetetptae diqllkktve teavqmlkdi kkdkvllrrk selpqdvyti kaleahkrae
      601 efltssqeal
//
LOCUS       XP_041324078             608 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            delta isoform isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324078
VERSION     XP_041324078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit delta isoform isoform X3"
                     /calculated_mol_wt=70301
     Region          116..519
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..608
                     /gene="PPP2R5D"
                     /coded_by="XM_041468144.1:68..1894"
                     /db_xref="GeneID:121353919"
ORIGIN      
        1 mlpvgeespk stksttkpgs ssssssssgk dggaenseeq aqqpqqqpqq pqqqpqqqpt
       61 snkrpsnsap pptqlnkiky sggpqivkke rrhsssrfnl sknrelqklp alkdappher
      121 eelfiqklrq ccvlfdfisd plsdlkfkev kraglnemve yithnrdvvt eaiypeavim
      181 fsvnlfrtlp pssnptgaef dpeedeptle aawphlqlvy efflrflesp dfqpnvakky
      241 idqkfvlsll dlfdsedpre rdflktilhr iygkflglra yvrrqinnif yrfiyetehh
      301 ngiaelleil gsiingfalp lkeehkmfli rvllplhkvk slsvyhpqla ycvvqflekd
      361 ssltepvivg llkfwpkths pkevmflnel eeildvieps efvkvmeplf rqlakcvssp
      421 hfqvaeraly ywnneyimsl isdnaakilp imfpalykns kshwnktihg liynalklfm
      481 emnqklfddc tqqykaekqk grfrmkeree mwqkieelar lnpqypmyya plplpsvccm
      541 etetptaedi qllkktvete avqmlkdikk dkvllrrkse lpqdvytika leahkraeef
      601 ltssqeal
//
LOCUS       XP_041324079             607 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit
            delta isoform isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324079
VERSION     XP_041324079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468145.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="serine/threonine-protein phosphatase 2A 56 kDa
                     regulatory subunit delta isoform isoform X4"
                     /calculated_mol_wt=70173
     Region          115..518
                     /region_name="B56"
                     /note="Protein phosphatase 2A regulatory B subunit (B56
                     family); pfam01603"
                     /db_xref="CDD:460264"
     CDS             1..607
                     /gene="PPP2R5D"
                     /coded_by="XM_041468145.1:68..1891"
                     /db_xref="GeneID:121353919"
ORIGIN      
        1 mlpvgeespk stksttkpgs ssssssssgk dggaenseea qqpqqqpqqp qqqpqqqpts
       61 nkrpsnsapp ptqlnkikys ggpqivkker rhsssrfnls knrelqklpa lkdapphere
      121 elfiqklrqc cvlfdfisdp lsdlkfkevk raglnemvey ithnrdvvte aiypeavimf
      181 svnlfrtlpp ssnptgaefd peedeptlea awphlqlvye fflrflespd fqpnvakkyi
      241 dqkfvlslld lfdsedprer dflktilhri ygkflglray vrrqinnify rfiyetehhn
      301 giaelleilg siingfalpl keehkmflir vllplhkvks lsvyhpqlay cvvqflekds
      361 sltepvivgl lkfwpkthsp kevmflnele eildviepse fvkvmeplfr qlakcvssph
      421 fqvaeralyy wnneyimsli sdnaakilpi mfpalyknsk shwnktihgl iynalklfme
      481 mnqklfddct qqykaekqkg rfrmkereem wqkieelarl npqypmyyap lplpsvccme
      541 tetptaediq llkktvetea vqmlkdikkd kvllrrksel pqdvytikal eahkraeefl
      601 tssqeal
//
LOCUS       XP_041324080             434 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal PAS domain-containing protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324080
VERSION     XP_041324080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="neuronal PAS domain-containing protein 4"
                     /calculated_mol_wt=47216
     Region          33..89
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(40..41,43,48,69..70)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(46..47,50..51,53..54,58,70..71,74..75,78,80..81,
                     84..85)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     Region          236..339
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..434
                     /gene="NPAS4"
                     /coded_by="XM_041468146.1:1789..3093"
                     /db_xref="GeneID:121353920"
ORIGIN      
        1 mtifcshchr plqaemsclp arakqapsas rpfrstksas karrdqinae lqalrsllpi
       61 saqekerlsy lhtmalvclr lrgaqlfppg lapptgpalg tellsllpgf llvlsadskl
      121 vyisenvtqv lglsvvella qgdtvfdild gpvgedvhkk lllareepgr evtfvsemrt
      181 skafrlqhgg nrvvavcgrf malrwppsps ttaflalctp vvqsptdgea asqddvfqsm
      241 hlldmtfidv tesvtyhlgy hreelvgqsw ysllhpedad laaaqhrava lgpgagpaag
      301 savlrvlrkd rawswlrvwa rrdggcitct crclreeeaa hlrarqpraa aappagrdlg
      361 rlaeqlrala dslsppaaaa prrwprpeea qddasvclgn sllhppqflr fpfeqkigcn
      421 ipsvlsqvss vqrc
//
LOCUS       XP_041324081             382 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324081
VERSION     XP_041324081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="kelch domain-containing protein 3"
                     /calculated_mol_wt=43127
     Region          <11..260
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          14..73
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          77..123
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          128..173
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          180..236
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          239..283
                     /region_name="Kelch_6"
                     /note="Kelch motif; pfam13964"
                     /db_xref="CDD:404790"
     Region          239..283
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..382
                     /gene="KLHDC3"
                     /coded_by="XM_041468147.1:212..1360"
                     /db_xref="GeneID:121353921"
ORIGIN      
        1 mlrwavhleg gprrvnhaav avghkvysfg gycsgedyet lrqidvhvfn avslrwiklp
       61 pvwtnsrdhv revpymrygh savliddtvy iwggrndteg acnvlyafdv nthkwftpkv
      121 sgmvpgardg hsacvlaksm fifggyeqla dcfsndihkl dttnmtwtli sakgtparwr
      181 dfhsatiigt kmyvfggrad rfgpfhsnne iycnrikvfd tetnswldsp ptpvlpegrr
      241 shsafsynge lyvfggynar lnrhfhdlwk fnpvslswrk iepkgkgpcp rrrqcccrvg
      301 dkiilfggts pspeegmgde fdlmdhsdly ildfspslkt lcklaviqys ldqsclphdi
      361 rwelsamttn stisrpivsn qg
//
LOCUS       XP_041324082             382 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324082
VERSION     XP_041324082.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468148.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="kelch domain-containing protein 3"
                     /calculated_mol_wt=43127
     Region          <11..260
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          14..73
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          77..123
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          128..173
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          180..236
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          239..283
                     /region_name="Kelch_6"
                     /note="Kelch motif; pfam13964"
                     /db_xref="CDD:404790"
     Region          239..283
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..382
                     /gene="KLHDC3"
                     /coded_by="XM_041468148.1:281..1429"
                     /db_xref="GeneID:121353921"
ORIGIN      
        1 mlrwavhleg gprrvnhaav avghkvysfg gycsgedyet lrqidvhvfn avslrwiklp
       61 pvwtnsrdhv revpymrygh savliddtvy iwggrndteg acnvlyafdv nthkwftpkv
      121 sgmvpgardg hsacvlaksm fifggyeqla dcfsndihkl dttnmtwtli sakgtparwr
      181 dfhsatiigt kmyvfggrad rfgpfhsnne iycnrikvfd tetnswldsp ptpvlpegrr
      241 shsafsynge lyvfggynar lnrhfhdlwk fnpvslswrk iepkgkgpcp rrrqcccrvg
      301 dkiilfggts pspeegmgde fdlmdhsdly ildfspslkt lcklaviqys ldqsclphdi
      361 rwelsamttn stisrpivsn qg
//
LOCUS       XP_041324083             382 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324083
VERSION     XP_041324083.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468149.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="kelch domain-containing protein 3"
                     /calculated_mol_wt=43127
     Region          <11..260
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          14..73
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          77..123
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          128..173
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          180..236
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          239..283
                     /region_name="Kelch_6"
                     /note="Kelch motif; pfam13964"
                     /db_xref="CDD:404790"
     Region          239..283
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..382
                     /gene="KLHDC3"
                     /coded_by="XM_041468149.1:101..1249"
                     /db_xref="GeneID:121353921"
ORIGIN      
        1 mlrwavhleg gprrvnhaav avghkvysfg gycsgedyet lrqidvhvfn avslrwiklp
       61 pvwtnsrdhv revpymrygh savliddtvy iwggrndteg acnvlyafdv nthkwftpkv
      121 sgmvpgardg hsacvlaksm fifggyeqla dcfsndihkl dttnmtwtli sakgtparwr
      181 dfhsatiigt kmyvfggrad rfgpfhsnne iycnrikvfd tetnswldsp ptpvlpegrr
      241 shsafsynge lyvfggynar lnrhfhdlwk fnpvslswrk iepkgkgpcp rrrqcccrvg
      301 dkiilfggts pspeegmgde fdlmdhsdly ildfspslkt lcklaviqys ldqsclphdi
      361 rwelsamttn stisrpivsn qg
//
LOCUS       XP_041324084             211 aa            linear   VRT 06-MAY-2021
DEFINITION  male-enhanced antigen 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324084
VERSION     XP_041324084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468150.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..211
                     /product="male-enhanced antigen 1"
                     /calculated_mol_wt=22984
     Region          94..202
                     /region_name="MEA1"
                     /note="Male enhanced antigen 1 (MEA1); pfam06910"
                     /db_xref="CDD:429188"
     CDS             1..211
                     /gene="MEA1"
                     /coded_by="XM_041468150.1:12..647"
                     /db_xref="GeneID:121353922"
ORIGIN      
        1 mapaaraggt arrargplrd yntqsaprrp rrfrvaaaap prrrarcmav vrsmgpervc
       61 prepgppegp dgaagwsgde eeeeeeeeeg gggylyqpls qepeqglgda gpglqerlqm
      121 lrlhlpdppv dseeeneeea aegataqssh ssipmdaehv elvkrtmasv klptlgipaw
      181 anqiseeqwk dvvqrtlqar qslsgprpqw n
//
LOCUS       XP_041324085             169 aa            linear   VRT 06-MAY-2021
DEFINITION  pre T-cell antigen receptor alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041324085
VERSION     XP_041324085.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468151.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..169
                     /product="pre T-cell antigen receptor alpha"
                     /calculated_mol_wt=17250
     Region          19..130
                     /region_name="PTCRA"
                     /note="Pre-T-cell antigen receptor; pfam15028"
                     /db_xref="CDD:464455"
     CDS             1..169
                     /gene="PTCRA"
                     /coded_by="XM_041468151.1:1..510"
                     /db_xref="GeneID:121353924"
ORIGIN      
        1 melrrallaa allpllplgr aavplptltr plsmvlagqh rqlvvcvvsd lapssghavw
       61 isggngsilq sfaygasqed ggtvcsvsll ssdsprerel achvganrts pshssspiri
      121 tgneeaaelc stavspapal aallmavrvv llkvllsdav ltsillaqs
//
LOCUS       XP_041324086             832 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisome biogenesis factor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324086
VERSION     XP_041324086.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468152.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..832
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..832
                     /product="peroxisome biogenesis factor 6"
                     /calculated_mol_wt=89652
     Region          <319..829
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..832
                     /gene="PEX6"
                     /coded_by="XM_041468152.1:1..2499"
                     /db_xref="GeneID:121353925"
ORIGIN      
        1 mvqeftdafs krfhpgaapv cesfhsehtn lpprgaagfl nmtqviaaag prlralpgga
       61 ggggggaevw vsrrgllalg lfqgewvrvg aegaahehla allarpppwe ypraarrgla
      121 dgtallapal afnlgcdpaa aahlrlqrye rsgaadgkgs rsvlsvppfa kelhleivcs
      181 payntrgsyd cvlyrhfgtp rlvqegdilc vptfgnaefi elnadkflrw pelyfkvkki
      241 vgmvegeqse gylvdnqnts lylvgstnst vpsapaynsn efwsslspag lsdvvkqlcd
      301 alrphlsrra salsgvgsvl lsgpsgsgkl mavravcscl nlhlfkvdcv slcsdtsaat
      361 eekvqvafsq aqqyqpcvll lkdievlgrd rdglgedarv iatlrqllld rdpalshpvl
      421 vigttcqpqn vptdvqtafl hevkieapse eqrrlmlsml taslplgkev slsrlarrta
      481 gfvlgdfcal lshssraact riqalsfpgg lseeverdfc tagfpvleed fsaaldqlhd
      541 ahsqavgapk ipsvswqdvg glqevkkeil dtiqlplehp ellslglcrs glllygppgt
      601 gktllakava ttctmtflsv kgpelinmyv gqseenvrnv fararaaapc iiffdeldsl
      661 apsrgrsgds ggvmdrvvsq llaeldglhs trevfvigat nrpdlldpal lrpgrfdklv
      721 yvgisedres qlqvlsavtr kfkldpsvnl ttilekcpaq ltgadiyalc sdammcavkr
      781 kvewieegld teksaliltm edflqaaarl qpsvseqell ryrliqqkfa as
//
LOCUS       XP_041324087             430 aa            linear   VRT 06-MAY-2021
DEFINITION  ectonucleoside triphosphate diphosphohydrolase 6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324087
VERSION     XP_041324087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468153.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..430
                     /product="ectonucleoside triphosphate diphosphohydrolase
                     6"
                     /calculated_mol_wt=47624
     Region          61..419
                     /region_name="ASKHA_ATPase-like"
                     /note="ATPase-like domain of the ASKHA (Acetate and Sugar
                     Kinases/Hsc70/Actin) superfamily; cl49607"
                     /db_xref="CDD:483947"
     CDS             1..430
                     /gene="ENTPD6"
                     /coded_by="XM_041468153.1:287..1579"
                     /db_xref="GeneID:121353926"
ORIGIN      
        1 meamkiskrf fafgiltcia vyvayvkwhl gskpfvgate gvaesrgdkl thqavttdls
       61 vfygimfdag stgtrihifk faqqpretpr lthetfkalk pglsayaddv eksghgikel
      121 levakkevpm elwkftplvl kataglrllp gekaqkllek vkeifqaspf fvrdncvsim
      181 ngtdegisaw itinfltgrl ddpqrrsvgm ldlgggstqi tflprtkatl qtspsghtts
      241 fqmfnhtykl ysysylglgl msarlailgg vegkplgege elispclppg fksewqhaei
      301 vykikgqkag eplyescsnk vakmlykkvh ragevkdldf yifsyyydca aeaglidkek
      361 ggsltvsdfe iaakyvcktm eispgnnpfl cmdltyitfl lqelgfpesq sfkvklkvdf
      421 wgdagyagre
//
LOCUS       XP_041324089             358 aa            linear   VRT 06-MAY-2021
DEFINITION  lysophosphatidylserine lipase ABHD12 [Pyrgilauda ruficollis].
ACCESSION   XP_041324089
VERSION     XP_041324089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468155.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="lysophosphatidylserine lipase ABHD12"
                     /calculated_mol_wt=40889
     Region          <145..309
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..358
                     /gene="ABHD12"
                     /coded_by="XM_041468155.1:85..1161"
                     /db_xref="GeneID:121353927"
ORIGIN      
        1 mrkrnesvtv eheraaaasa apgpldkgcs lrrslrlpas aaaegmkrpl grryglwfrl
       61 rklllwllgv yiaipflvkl cpaiqaklvf lnfvrvpyfi dlkrpqdqgl nhtcnyylqp
      121 eedvtigvcs llfsssmala rggdhrvely kvlsslgyhv vtfdyrgwgd sigspsergm
      181 tydalhvfdw ikarsgdnpv yiwghslgtg vatnlvrrlc eretppdali lespftnire
      241 earshpfsvi yryfpgfdwf fldpittsgi kfandenvky iscsllilha eddpvvpfhl
      301 gkklyniaat srsfrdykvq fvpfhtelgy rhkyiyrspe lprilreflg ksehehhh
//
LOCUS       XP_041324090             272 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal RNA processing protein 36 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324090
VERSION     XP_041324090.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468156.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..272
                     /product="ribosomal RNA processing protein 36 homolog"
                     /calculated_mol_wt=31106
     Region          103..257
                     /region_name="RRP36"
                     /note="rRNA biogenesis protein RRP36; pfam06102"
                     /db_xref="CDD:461829"
     CDS             1..272
                     /gene="RRP36"
                     /coded_by="XM_041468156.1:1..819"
                     /db_xref="GeneID:121353928"
ORIGIN      
        1 mgpgwgrgrt raraaaateg eeeaaaeqrl rslepaeess gssdesddgg svagaggkdh
       61 sdmsfeellr vqsdtrtkvs rkvpggkkta kptkatlkqq qgkkgplems akkpvpflrq
      121 vvpvrkkvqr dprfddlsge ykpeifmkty sfldsikkqe kemvqkqlkk crnmeqkekl
      181 qwllnrmtqq eqaqkkqqkl rerelslkrq qrelakqgkk pfflkksekr klelaekyae
      241 lkrsgklesf lnkkrkrnai kdkrhlpsqk nl
//
LOCUS       XP_041324091             155 aa            linear   VRT 06-MAY-2021
DEFINITION  cullin-7-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324091
VERSION     XP_041324091.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468157.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="cullin-7-like"
                     /calculated_mol_wt=17217
     Region          <48..137
                     /region_name="Cullin"
                     /note="Cullin family; pfam00888"
                     /db_xref="CDD:459983"
     CDS             1..155
                     /gene="LOC121353929"
                     /coded_by="XM_041468157.1:150..617"
                     /db_xref="GeneID:121353929"
ORIGIN      
        1 mlsnlaesee lqrqfclfql qeqdkrllel dtgpdevlgp aavadvpevk vlalsprcwp
       61 vsplcymenp grffpavlss pldefadfcr qsqsqlgwec tkprrlqwtw lghaelqygd
      121 cvlhvstlqm yillcfnsaq vgaggeascl gihlc
//
LOCUS       XP_041324092             298 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: visual system homeobox 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324092
VERSION     XP_041324092.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468158.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="LOW QUALITY PROTEIN: visual system homeobox
                     1-like"
                     /calculated_mol_wt=32440
     Region          106..162
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..298
                     /gene="LOC121353930"
                     /coded_by="XM_041468158.1:1..897"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121353930"
ORIGIN      
        1 mpgraepsgg raaagpvavp vpvtpgaaar pggaglrakg faitallgxc llpaplpllp
       61 argprpppgp ppaarrhken isdedslsgd asdlkmstsq ikrkkrrhrt vftahqleel
      121 ekafneahyp dvyaremlav ktelpedriq vwfqnrrakw rkrekcwgrs svmaeyglyg
      181 amvrhsiplp esiinsaksg lvgscapwll gmhkksmevs rkaesqekla dgwrmeqeee
      241 elkgtqassq kgsdklgpak dsedtaidls rtakhekrgv lrqyingdpp seqndkdh
//
LOCUS       XP_041324093             333 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: transmembrane protein 121-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324093
VERSION     XP_041324093.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468159.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="LOW QUALITY PROTEIN: transmembrane protein
                     121-like"
                     /calculated_mol_wt=37670
     Region          97..290
                     /region_name="CECR6_TMEM121"
                     /note="CECR6/TMEM121 family; pfam14997"
                     /db_xref="CDD:464432"
     CDS             1..333
                     /gene="LOC121353931"
                     /coded_by="XM_041468159.1:240..1241"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121353931"
ORIGIN      
        1 mllgpgmhdc agrapsakkq efrmvppppv skphvclstv limtslvlmd aylveqsqgs
       61 rklgisvmva vgdicfllvl ryvaiwvgae vktakrgyam ilwflyvfvl eikvyfvyqn
      121 ykadrksldl iarkaltlll sicipalyvl lvatehmeyv rtfkkkedlr nrlfwvivdm
      181 ldvldiqanl wepqkkglpl waegimffyc yilllvlpcv slceismqgi givphrmmly
      241 pmlsmltvni atifirgsnm iffrdarvss ifmgknmlai gmkvcmfvqy qrhqhhappg
      301 pdpqhstpaq pptglrkard qpacpeelaq dnt
//
LOCUS       XP_041324094             158 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/potassium-transporting ATPase subunit alpha-B-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324094
VERSION     XP_041324094.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468160.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520441.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 31% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>158
                     /product="sodium/potassium-transporting ATPase subunit
                     alpha-B-like"
     Region          <1..>138
                     /region_name="ATPase-IIC_X-K"
                     /note="sodium or proton efflux -- potassium uptake
                     antiporter, P-type ATPase, alpha subunit; TIGR01106"
                     /db_xref="CDD:273445"
     CDS             1..158
                     /gene="LOC121353932"
                     /coded_by="XM_041468160.1:52..>526"
                     /db_xref="GeneID:121353932"
ORIGIN      
        1 mvtgdhpvta kaiaaqvgii segsetpedv aarlhlpleq vepsqararv vtgselaala
       61 pgaleellra hpemvfarts pqqklvives cqrlgaivav tgdgvekspk mpnvtkrvgq
      121 villddnfas ivtgleqgvg qvillddnfa sivtgleq
//
LOCUS       XP_041324095             173 aa            linear   VRT 06-MAY-2021
DEFINITION  plasma membrane calcium-transporting ATPase 4-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324095
VERSION     XP_041324095.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468161.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520496.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..173
                     /product="plasma membrane calcium-transporting ATPase
                     4-like"
     Region          <1..125
                     /region_name="Haloacid Dehalogenase-like Hydrolases"
                     /note="The haloacid dehalogenase (HAD) superfamily
                     includes carbon and phosphorus hydrolases such as
                     2-haloalkonoate dehalogenase, epoxide hydrolase,
                     phosphoserine phosphatase, phosphomannomutase,
                     phosphoglycolate phosphatase, P-type ATPase, among others.
                     These...; cl21460"
                     /db_xref="CDD:473868"
     CDS             1..173
                     /gene="LOC121353933"
                     /coded_by="XM_041468161.1:<1..522"
                     /db_xref="GeneID:121353933"
ORIGIN      
        1 vpdailkcqr agitvrmvtg dnintaraia tkcgillpge dflclegkef nrlirnekge
       61 veqeqldkiw pklrvlarss ptdkhtlvkg iidstvgdqr qvvavtgdgt ndgpalkkad
      121 vgfamvgpaw gfsfalgias rpwnlysksm gwtknpkrdf lrmlglglsc vgl
//
LOCUS       XP_041324096             107 aa            linear   VRT 06-MAY-2021
DEFINITION  adenylate cyclase type 3-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324096
VERSION     XP_041324096.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468162.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520518.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>107
                     /product="adenylate cyclase type 3-like"
     Region          15..>107
                     /region_name="Nucleotidyl_cyc_III"
                     /note="Class III nucleotidyl cyclases; cl11967"
                     /db_xref="CDD:448371"
     Site            order(20,64)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:143636"
     CDS             1..107
                     /gene="LOC121353935"
                     /coded_by="XM_041468162.1:<1..>323"
                     /codon_start=3
                     /db_xref="GeneID:121353935"
ORIGIN      
        1 rdrvcratsg ifsrsilfad ivgftqlsss csaqelvkll nelfarfdkl aakhhqlrik
       61 ilgdcyycic glpefredha vcsirmglam veaiasvrer tctavdi
//
LOCUS       XP_041324098             797 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: neurotrypsin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324098
VERSION     XP_041324098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468164.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="LOW QUALITY PROTEIN: neurotrypsin-like"
                     /calculated_mol_wt=86654
     Region          89..189
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          199..299
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          306..407
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          422..521
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          553..794
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            553
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(598,648,747)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(741,767,769)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..797
                     /gene="LOC121353939"
                     /coded_by="XM_041468164.1:101..2494"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121353939"
ORIGIN      
        1 mtfagfvval vigaipgvrg pgqvsaslpa arapqppagc paggfpaaqr pwapaapalp
       61 xgegrpgcvp gagrgaaerg radcergsvr lrggknefeg tvevyfngiw gticgshwdn
      121 ndatvvcrql algekgtakh ipfsglglip vfwsevrcrg deenillcek dtwqdgtcpq
      181 kmaaavtcss slgpvftpir laggsnaheg rvevyhggqw gtvcddqwdd adaevvcrql
      241 glggvakaws qayfgegsgp vlldevqctg nelsieqcpk sswrehncgh kedagvsctp
      301 ltdgalrltg gkgshegrle vyhtgqwgtv cddgwtelnt qvvcwqlgfk ygksagmekq
      361 sytegisgpi wlddvicsgk etnllqcsrr ewgkhdcnhq edvrlichpe ndshkrslgp
      421 pirlmdgenk kegrveifin gqwgticddg wsdkdaavvc rqlgykgpar artmayfgeg
      481 kgpihvdnvk ctgnerslad cikqdigthn crhsedagvi cdhlsrkipg nsnkdslasv
      541 cglrllhrrq kriiggknsl rggwpwqval rlksshgdgr llcgatliss cwvltaahcf
      601 krygnntrny vvrvgdyhtl vleeyeeeig vqeivvhkdy rpdssdydia llrlqgpeeq
      661 carfsthvlp aclplrrerp qktapncfit gwgdtgrays rtlqqaaipl lpkrvceery
      721 krrftgrmlc agnvqeqkrv dscqgdsggp lmcerpgesw vvygvtswgy gcgvkdspgv
      781 ytkvssfvpw iksvtkl
//
LOCUS       XP_041324099             459 aa            linear   VRT 06-MAY-2021
DEFINITION  N6-adenosine-methyltransferase non-catalytic subunit [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324099
VERSION     XP_041324099.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468165.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520540.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..459
                     /product="N6-adenosine-methyltransferase non-catalytic
                     subunit"
                     /calculated_mol_wt=52388
     Region          186..363
                     /region_name="MT-A70"
                     /note="pfam05063"
                     /db_xref="CDD:368270"
     CDS             1..459
                     /gene="METTL14"
                     /coded_by="XM_041468165.1:557..1936"
                     /db_xref="GeneID:121353940"
ORIGIN      
        1 mnsrlqeire rqklrrqlla qqlgaenads igavlnskde qreiaetret craaydtsap
       61 nakrkypdeg eadeeeieey kdevelqqde enlpyeeeiy kdsstflkgt qslnphndyc
      121 qhfvdtghrp qnfirdvgla drfeeypklr elirlkdeli sksntppmyl qadleafdir
      181 elkskfdvil leppleeyyr etgitanekc wtwddimkle ieeiaaprsf vflwcgsgeg
      241 ldlgrvclrk wgyrrcedic wiktnknnpg ktktldpkav fqrtkehclm gikgtvrrst
      301 dgdfihanvd idliiteepe igniekpvei fhiiehfclg rrrlhlfgrd stirpgwltv
      361 gptltnsnfn aetyssyfta pnshltgcte eierlrpksp ppksksdrgg gaprgggrgg
      421 tsagrgergr ernrtnfrge rggfrggrgg thrggfptr
//
LOCUS       XP_041324100             873 aa            linear   VRT 06-MAY-2021
DEFINITION  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324100
VERSION     XP_041324100.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468166.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..873
                     /product="bifunctional heparan sulfate
                     N-deacetylase/N-sulfotransferase 3"
                     /calculated_mol_wt=100686
     Region          76..506
                     /region_name="HSNSD"
                     /note="heparan sulfate-N-deacetylase; pfam12062"
                     /db_xref="CDD:463450"
     Region          595..846
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..873
                     /gene="LOC121353942"
                     /coded_by="XM_041468166.1:1..2622"
                     /db_xref="GeneID:121353942"
ORIGIN      
        1 msfilklhrh fqrtvillat fcmvsivisa yylyngykqe nelpetssev ecgdpqllpy
       61 klmemkttkt vdllrtdlvv lvfvesqyst lgqdiitile ssrfqfhiei asgkgdlpvl
      121 idknkgkyal ivyenilkyv nmdswnrgll dkycveygvg vigfhkgnen slqsfqlkgf
      181 pfhvhsnlgi kdccinphsp llhvtkpskl ekgpllgndw avfqinhtty qpvvfakvkt
      241 penlsppaai salyatvihd lglhdgiqrv lfgnnlnfwl hklifidais flsgkkltls
      301 ldryilvdid difvgkdgtr mntndvqall dtqnllraqi tnftfnlgfs gkfyhtgtee
      361 edegddlllr svdefwwfph mwshmqphlf hnesslveqm ilnkkfaleh giptdlgyav
      421 aphhsgvypv hvqlydawkk vwnirvtste eyphlkpary rrgfihknim vlprqtcglf
      481 thtifykeyp ggpkeldksi qggelfftvv lnpisifmth lsnygndrlg lytfvnlanf
      541 vhtwtnlklq tlppvqlahk yfelfpeqkd plwqnpcddk rhkdiwskek tcdrlpkflv
      601 vgpqktgtta lylflimhps iisnspspkt feevqffnrn nyhrgidwym dffptpsnvt
      661 tdflfeksan yfhseeapkr aaslipkaki itilidpsdr ayswyqhqrs hedpaalkfs
      721 fyqvitagpr apselralqk rclapgwyat hierwltyfp pyqlliidgq qlrtdpstvm
      781 devqkflgvs phynysealt fdshkgfwcq lleegktkcl gkskgrkypp mdsecrafls
      841 syyrdhnvel skllhklgqp lpswlrqelq kvr
//
LOCUS       XP_041324101             131 aa            linear   VRT 06-MAY-2021
DEFINITION  splicing factor YJU2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324101
VERSION     XP_041324101.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468167.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520574.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..131
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..131
                     /product="splicing factor YJU2-like"
                     /calculated_mol_wt=13659
     Region          <1..126
                     /region_name="Saf4_Yju2"
                     /note="Saf4/Yju2 protein; pfam04502"
                     /db_xref="CDD:461333"
     CDS             1..131
                     /gene="LOC121353944"
                     /coded_by="XM_041468167.1:32..427"
                     /db_xref="GeneID:121353944"
ORIGIN      
        1 mkamleqaqn rrllvdsdsd eepakprpnp taqtkptdil qedpqpqskr prteswersv
       61 gklstraqla glvaprkqkp dpaldnrmet pgttattgsl papaapaaaa aatsslgllg
      121 aysdsegsas d
//
LOCUS       XP_041324102              84 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 5A-1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324102
VERSION     XP_041324102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520607.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="eukaryotic translation initiation factor
                     5A-1-like"
                     /calculated_mol_wt=8561
     Region          1..>55
                     /region_name="PLN03107"
                     /note="eukaryotic translation initiation factor 5A;
                     Provisional"
                     /db_xref="CDD:215580"
     CDS             1..84
                     /gene="LOC121353945"
                     /coded_by="XM_041468168.1:150..404"
                     /db_xref="GeneID:121353945"
ORIGIN      
        1 maddldfetg dagasatfpm qcsalrkngf vvlkgrpcki vemstsktgk hghakvatap
       61 grgwarsgga qnsrnsggnp eils
//
LOCUS       XP_041324103             337 aa            linear   VRT 06-MAY-2021
DEFINITION  neurogenic differentiation factor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324103
VERSION     XP_041324103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="neurogenic differentiation factor 6"
                     /calculated_mol_wt=38649
     Region          82..151
                     /region_name="bHLH_TS_NeuroD6_ATOH2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     neurogenic differentiation factor 6 (NeuroD6) and similar
                     proteins; cd19722"
                     /db_xref="CDD:381565"
     Site            order(100,103..104,106,108,111,131..132)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381565"
     Site            order(110,113..114,116..117,120..121,132..133,136,140,
                     142..143,146..147,149..150)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381565"
     Region          153..272
                     /region_name="Neuro_bHLH"
                     /note="Neuronal helix-loop-helix transcription factor;
                     pfam12533"
                     /db_xref="CDD:463621"
     CDS             1..337
                     /gene="NEUROD6"
                     /coded_by="XM_041468169.1:137..1150"
                     /db_xref="GeneID:121353948"
ORIGIN      
        1 mltlpfdesv vmpesqmcrk fpresddqkq mkntesfskq iilrgknikr spgedtekee
       61 eeeereeede nglprrrglr kkktskirme rikfrrqean arernrmhgl ndaldnlrkv
      121 vpcysktqkl skietlrlak nyiwalseil rigkrpdllt fvqnlckgls qpttnlvagc
      181 lqlnarsflm gqagegahht rtsystfypp yhspelgtsp ghgtldnsks mkpynycsay
      241 esfyestspd ctspqfegpl spppinyngi fslkqeesld ygknynygmh ycavpprgpl
      301 gqssmfrlpt eshfpydlhl rsqsltmqde lnavfhn
//
LOCUS       XP_041324104             527 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin alpha-9-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324104
VERSION     XP_041324104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..527
                     /product="integrin alpha-9-like"
     Region          1..395
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     CDS             1..527
                     /gene="LOC121353949"
                     /coded_by="XM_041468170.1:<1..1586"
                     /codon_start=3
                     /db_xref="GeneID:121353949"
ORIGIN      
        1 lnynltadvg kkeksqqprv yfvtsgetag qiteklqlsf mqekcehyla yvkkrvkdvi
       61 spivfeasys lgehaiergk edkelttlkp ilrwkkgqki aqrnqtvfer ncqsddcaad
      121 lklqgkllls svhdrtayla lgavrnisln ifvsntgdda ydtnvffnfs gelffikmwq
      181 keelgiacel lesdflkcsv gfpfmrsksr yeftvifdts hltgqeetlt flvtaqsgnl
      241 ecteclhdnt lilsvplmhe vdssingevf ptsffygdsv aasnfvqlen heclfqslnf
      301 tlqvynagps tlpgafldis ipnrlsatga elfhiqqmmv gqdkgscsfn rnhspcvvpq
      361 enenifhtif afftksgrkv ldcerpgrsc livhcnissl pkaescdini ymllnteilr
      421 kdsssviqfv trarlqmdhd lrvvevpngn peektvvfea lhnleprgyv vgwiiaisll
      481 vgilifllla vllwkmgffr rrykeiieae ksrkenedsw nwvqknq
//
LOCUS       XP_041324106             348 aa            linear   VRT 06-MAY-2021
DEFINITION  histidine-rich glycoprotein-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324106
VERSION     XP_041324106.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468172.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520652.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>348
                     /product="histidine-rich glycoprotein-like"
     CDS             1..348
                     /gene="LOC121353951"
                     /coded_by="XM_041468172.1:<1..>1044"
                     /db_xref="GeneID:121353951"
ORIGIN      
        1 srnvsglrea lqrkigalel qlrlhgngsh hhgnhqhghh dghhgnhqee khphgfhgnh
       61 hgdphgnhhq ekhgdhaehh gyhgnrhhqe eekhphghhg nhhhnqeeek hphgfhgnhy
      121 hheghhsdhh ghhgdhqrgh hgdhekhgdh qaglhgnhhq ekhphgfhgn hekhgdhhek
      181 nlhgfhgnhd gfhgnhhshg lhgdhekhph glhgdhdglh gnhhhekhph gfhgnhndlh
      241 gnhhqekhph gfhgnhaphd hhgnqhpgyh gdgakaadps rphgyhgnrs aalhsnhppg
      301 lhgdgkpgnr leagnhgnrp qhqhllhgnr yggfrapfpl rtnsvfar
//
LOCUS       XP_041324107             311 aa            linear   VRT 06-MAY-2021
DEFINITION  apolipoprotein C-III [Pyrgilauda ruficollis].
ACCESSION   XP_041324107
VERSION     XP_041324107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520696.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="apolipoprotein C-III"
                     /calculated_mol_wt=32604
     Region          <87..247
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     Region          242..309
                     /region_name="Apo-CIII"
                     /note="Apolipoprotein CIII (Apo-CIII); pfam05778"
                     /db_xref="CDD:461737"
     CDS             1..311
                     /gene="APOC3"
                     /coded_by="XM_041468173.1:470..1405"
                     /db_xref="GeneID:121353952"
ORIGIN      
        1 mepgdtrgct qagchrsfpv qapgrspgtg rgrntaghcs htvpgnaagp rscpgrghra
       61 lgthpggspr psppprgqrs radvslrakg aagrgrdrpg gggdsgkvrr asrcprascp
      121 gtgpldvtlv pcvpraappr asgwlrtrvc prraarlrah phrhagpqra psprdfptpg
      181 wtqrpcsppa pcpdlctnpp eaikrepgaa pasepgtamk asllfllact aflavgarad
      241 speepkalvq kvqelaqkat amakdafsrv reseaaqqar qwlsdsaela kqrlvwlkqq
      301 laellkktpp a
//
LOCUS       XP_041324108             222 aa            linear   VRT 06-MAY-2021
DEFINITION  apolipoprotein A-I, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324108
VERSION     XP_041324108.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468174.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520696.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..222
                     /product="apolipoprotein A-I"
     Region          26..199
                     /region_name="Apolipoprotein"
                     /note="Apolipoprotein A1/A4/E domain; pfam01442"
                     /db_xref="CDD:460211"
     CDS             1..222
                     /gene="APOA1"
                     /coded_by="XM_041468174.1:<1..669"
                     /db_xref="GeneID:121353953"
ORIGIN      
        1 grvaggvglg gprapcvtpl lsrslklgen ldtlgaaaak lredvapyyk evremwlkdt
       61 eslrkeltkd leevkekikp fldqfsakwt edleqyrqrl aplaqelkel skqkvellqq
      121 kltpvaeear drlrghveel rknvapfsde lrqklsqkle eirekgipqa aeyqakvveq
      181 lsnlrekmtp lvqdfkerlt pytetlkarf lslleelqkt va
//
LOCUS       XP_041324109             124 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 14I1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324109
VERSION     XP_041324109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520707.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>124
                     /product="olfactory receptor 14I1-like"
     Region          32..>124
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          58..80
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          96..118
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..124
                     /gene="LOC121353954"
                     /coded_by="XM_041468175.1:1..>373"
                     /db_xref="GeneID:121353954"
ORIGIN      
        1 msnsssishf lllaladtrq lqllhfclll gislaallgn gliisavacg qhlhtpmfff
       61 llnlalsdlg sicttvpkam hnslwdttti sytgcaaqlf lflffistef slltnmcddr
      121 yvsi
//
LOCUS       XP_041324110            1838 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324110
VERSION     XP_041324110.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468176.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1838
                     /product="afadin isoform X1"
                     /calculated_mol_wt=209428
     Region          22..134
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          250..350
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          387..505
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          613..941
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1014..1101
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1026..1032,1047,1050,1080,1084,1087..1088)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1460..1697
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1838
                     /gene="AFDN"
                     /coded_by="XM_041468176.1:429..5945"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgeerrldvd ekplvvqlnw
      121 nkddregrfv lknendtlpp kkaqsngpek qekegviqnf krtlskkekk ekkrrekeal
      181 rqasdkddrl lhgddienfr laaevykdmp etsftrtisn pevvmkrrrq qklekrmqef
      241 rssdgrpdsg gtlriyadsl kpnipyktil lsttdtadfa viealekygl ekenpkdyci
      301 arvmlppdaq hsddkgaket ildddecplq ifrewpsdkg ilvfqlkrrp pdyvpkktrk
      361 itdgkqlrgk ervdgsgygs clppeklpyl velspgrrnh fayynyhtye dgsdsrdkpk
      421 lyrlqlsvte vgtekfddns iqlfgpgiqp hhcdltnmdg vvtvtprsid aetyvegqri
      481 settmlqsgm kvqfgsshvf kfvdptqdhi iskrstdasl mvkgprhrtg avqettfdle
      541 gdihsgtafp askstsrldg drtssassta ergmvkpmir idqqdyrred srsqdthgpe
      601 pilpasiefr essedaflsa iinytnsstv hfklsptyvl ymtcryvlss qyrpditpae
      661 rthkviaivn kmvnmmegvi qevdqvdqkq kniagalafw manasellnf ikqdrdlsri
      721 tvdaqdvlah lvqmafkylv hclqselnny mpaflddpee nnpqrpkidd vlhtltgams
      781 llrrcrvnaa ltiqlfsqlf hfinmwlfnr lvtapdsglc shywgaimrq qlghieawae
      841 kqglelaadc hlsrivqatt lltmdkysha dvpninstcf klnslqlqal lqnyhcapde
      901 pliptelien vvtvaentad elarsdgrev qleedpdlhl pfllpedgys cdvvrnvpsg
      961 lqefldplcq rgfcrltphp rspgtwtiyf egadyeshlp henaelaqpl rkepeiitvt
     1021 lkkqngmgls ivaakgagqd klgiyvksvv kggaadvdgr laagdqllsv dgrslvglsq
     1081 eraaelmtrt gsvvtlevak qgaiyhglat llnqpspmmq rvsdrhgsgk prpksegfel
     1141 ynnstqngsp espqlpwtey sepkklpgdd rlmknradhr sspnvanqpp spggknayas
     1201 gtttkitsvs tgnlcteeqv lpprpeaypi ptqtytreyf tfpasksqdr mgpaqsqwpn
     1261 yeekpqlqae snhsinttmq rvarsqeelr devfqpernr levvirkdve yidrksdsdq
     1321 wmnssvdsst ssqehlnhss kpvspgsclt ksgpgrwktp atsqptpvai sqpirtdlpp
     1381 ppppppvhya aefdelqmdl plppppppnq igaqassqva aaerkkreeh qrwyekekar
     1441 leeererkrr eqerklgqmr sqplisaqpv aspvslqqvk sekpstlqrs qetvirelqp
     1501 qqqprtierr dlqyitiske elssgdslsp dpwkrdakek lekqqqmhiv dmlskeiqel
     1561 qnkpdrtaee ndrlrklmle wqfqkrlqes kqkdedddee eddevdtmli mqrleaerra
     1621 rlqdeerrrq qqleemrkre aedrarqeee rrqqeeertr reaeekrrqe eeyysrleae
     1681 rrrqhdeaer rllepdepgl yrpplpreye lpsltpssna pppppqrnts ylktqvlspd
     1741 tiytakfvay nddddeeeed snlagiisyt gstgaaagev yrdprdkrsk sqdadlpgap
     1801 enltfrerqr lfsqgqdvsn kvkasrklme lenelntk
//
LOCUS       XP_041324111            1837 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324111
VERSION     XP_041324111.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468177.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1837
                     /product="afadin isoform X2"
                     /calculated_mol_wt=209298
     Region          22..133
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          249..349
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          386..504
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          612..940
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1013..1100
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1025..1031,1046,1049,1079,1083,1086..1087)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1459..1696
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1837
                     /gene="AFDN"
                     /coded_by="XM_041468177.1:429..5942"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgerrldvde kplvvqlnwn
      121 kddregrfvl knendtlppk kaqsngpekq ekegviqnfk rtlskkekke kkrrekealr
      181 qasdkddrll hgddienfrl aaevykdmpe tsftrtisnp evvmkrrrqq klekrmqefr
      241 ssdgrpdsgg tlriyadslk pnipyktill sttdtadfav iealekygle kenpkdycia
      301 rvmlppdaqh sddkgaketi ldddecplqi frewpsdkgi lvfqlkrrpp dyvpkktrki
      361 tdgkqlrgke rvdgsgygsc lppeklpylv elspgrrnhf ayynyhtyed gsdsrdkpkl
      421 yrlqlsvtev gtekfddnsi qlfgpgiqph hcdltnmdgv vtvtprsida etyvegqris
      481 ettmlqsgmk vqfgsshvfk fvdptqdhii skrstdaslm vkgprhrtga vqettfdleg
      541 dihsgtafpa skstsrldgd rtssasstae rgmvkpmiri dqqdyrreds rsqdthgpep
      601 ilpasiefre ssedaflsai inytnsstvh fklsptyvly mtcryvlssq yrpditpaer
      661 thkviaivnk mvnmmegviq evdqvdqkqk niagalafwm anasellnfi kqdrdlsrit
      721 vdaqdvlahl vqmafkylvh clqselnnym paflddpeen npqrpkiddv lhtltgamsl
      781 lrrcrvnaal tiqlfsqlfh finmwlfnrl vtapdsglcs hywgaimrqq lghieawaek
      841 qglelaadch lsrivqattl ltmdkyshad vpninstcfk lnslqlqall qnyhcapdep
      901 liptelienv vtvaentade larsdgrevq leedpdlhlp fllpedgysc dvvrnvpsgl
      961 qefldplcqr gfcrltphpr spgtwtiyfe gadyeshlph enaelaqplr kepeiitvtl
     1021 kkqngmglsi vaakgagqdk lgiyvksvvk ggaadvdgrl aagdqllsvd grslvglsqe
     1081 raaelmtrtg svvtlevakq gaiyhglatl lnqpspmmqr vsdrhgsgkp rpksegfely
     1141 nnstqngspe spqlpwteys epkklpgddr lmknradhrs spnvanqpps pggknayasg
     1201 tttkitsvst gnlcteeqvl pprpeaypip tqtytreyft fpasksqdrm gpaqsqwpny
     1261 eekpqlqaes nhsinttmqr varsqeelrd evfqpernrl evvirkdvey idrksdsdqw
     1321 mnssvdssts sqehlnhssk pvspgscltk sgpgrwktpa tsqptpvais qpirtdlppp
     1381 pppppvhyaa efdelqmdlp lppppppnqi gaqassqvaa aerkkreehq rwyekekarl
     1441 eeererkrre qerklgqmrs qplisaqpva spvslqqvks ekpstlqrsq etvirelqpq
     1501 qqprtierrd lqyitiskee lssgdslspd pwkrdakekl ekqqqmhivd mlskeiqelq
     1561 nkpdrtaeen drlrklmlew qfqkrlqesk qkdedddeee ddevdtmlim qrleaerrar
     1621 lqdeerrrqq qleemrkrea edrarqeeer rqqeeertrr eaeekrrqee eyysrleaer
     1681 rrqhdeaerr llepdepgly rpplpreyel psltpssnap ppppqrntsy lktqvlspdt
     1741 iytakfvayn ddddeeeeds nlagiisytg stgaaagevy rdprdkrsks qdadlpgape
     1801 nltfrerqrl fsqgqdvsnk vkasrklmel enelntk
//
LOCUS       XP_041324112            1831 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324112
VERSION     XP_041324112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468178.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1831
                     /product="afadin isoform X3"
                     /calculated_mol_wt=208614
     Region          22..134
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          250..350
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          387..505
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          613..934
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1007..1094
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1019..1025,1040,1043,1073,1077,1080..1081)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1453..1690
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1831
                     /gene="AFDN"
                     /coded_by="XM_041468178.1:429..5924"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgeerrldvd ekplvvqlnw
      121 nkddregrfv lknendtlpp kkaqsngpek qekegviqnf krtlskkekk ekkrrekeal
      181 rqasdkddrl lhgddienfr laaevykdmp etsftrtisn pevvmkrrrq qklekrmqef
      241 rssdgrpdsg gtlriyadsl kpnipyktil lsttdtadfa viealekygl ekenpkdyci
      301 arvmlppdaq hsddkgaket ildddecplq ifrewpsdkg ilvfqlkrrp pdyvpkktrk
      361 itdgkqlrgk ervdgsgygs clppeklpyl velspgrrnh fayynyhtye dgsdsrdkpk
      421 lyrlqlsvte vgtekfddns iqlfgpgiqp hhcdltnmdg vvtvtprsid aetyvegqri
      481 settmlqsgm kvqfgsshvf kfvdptqdhi iskrstdasl mvkgprhrtg avqettfdle
      541 gdihsgtafp askstsrldg drtssassta ergmvkpmir idqqdyrred srsqdthgpe
      601 pilpasiefr essedaflsa iinytnsstv hfklsptyvl ymtcryvlss qyrpditpae
      661 rthkviaivn kmvnmmegvi qkqkniagal afwmanasel lnfikqdrdl sritvdaqdv
      721 lahlvqmafk ylvhclqsel nnympafldd peennpqrpk iddvlhtltg amsllrrcrv
      781 naaltiqlfs qlfhfinmwl fnrlvtapds glcshywgai mrqqlghiea waekqglela
      841 adchlsrivq attlltmdky shadvpnins tcfklnslql qallqnyhca pdepliptel
      901 ienvvtvaen tadelarsdg revqleedpd lhlpfllped gyscdvvrnv psglqefldp
      961 lcqrgfcrlt phprspgtwt iyfegadyes hlphenaela qplrkepeii tvtlkkqngm
     1021 glsivaakga gqdklgiyvk svvkggaadv dgrlaagdql lsvdgrslvg lsqeraaelm
     1081 trtgsvvtle vakqgaiyhg latllnqpsp mmqrvsdrhg sgkprpkseg felynnstqn
     1141 gspespqlpw teysepkklp gddrlmknra dhrsspnvan qppspggkna yasgtttkit
     1201 svstgnlcte eqvlpprpea ypiptqtytr eyftfpasks qdrmgpaqsq wpnyeekpql
     1261 qaesnhsint tmqrvarsqe elrdevfqpe rnrlevvirk dveyidrksd sdqwmnssvd
     1321 sstssqehln hsskpvspgs cltksgpgrw ktpatsqptp vaisqpirtd lppppppppv
     1381 hyaaefdelq mdlplppppp pnqigaqass qvaaaerkkr eehqrwyeke karleeerer
     1441 krreqerklg qmrsqplisa qpvaspvslq qvksekpstl qrsqetvire lqpqqqprti
     1501 errdlqyiti skeelssgds lspdpwkrda keklekqqqm hivdmlskei qelqnkpdrt
     1561 aeendrlrkl mlewqfqkrl qeskqkdedd deeeddevdt mlimqrleae rrarlqdeer
     1621 rrqqqleemr kreaedrarq eeerrqqeee rtrreaeekr rqeeeyysrl eaerrrqhde
     1681 aerrllepde pglyrpplpr eyelpsltps snapppppqr ntsylktqvl spdtiytakf
     1741 vaynddddee eedsnlagii sytgstgaaa gevyrdprdk rsksqdadlp gapenltfre
     1801 rqrlfsqgqd vsnkvkasrk lmelenelnt k
//
LOCUS       XP_041324113            1830 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324113
VERSION     XP_041324113.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468179.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1830
                     /product="afadin isoform X4"
                     /calculated_mol_wt=208485
     Region          22..133
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          249..349
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          386..504
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          612..933
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1006..1093
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1018..1024,1039,1042,1072,1076,1079..1080)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1452..1689
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1830
                     /gene="AFDN"
                     /coded_by="XM_041468179.1:429..5921"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgerrldvde kplvvqlnwn
      121 kddregrfvl knendtlppk kaqsngpekq ekegviqnfk rtlskkekke kkrrekealr
      181 qasdkddrll hgddienfrl aaevykdmpe tsftrtisnp evvmkrrrqq klekrmqefr
      241 ssdgrpdsgg tlriyadslk pnipyktill sttdtadfav iealekygle kenpkdycia
      301 rvmlppdaqh sddkgaketi ldddecplqi frewpsdkgi lvfqlkrrpp dyvpkktrki
      361 tdgkqlrgke rvdgsgygsc lppeklpylv elspgrrnhf ayynyhtyed gsdsrdkpkl
      421 yrlqlsvtev gtekfddnsi qlfgpgiqph hcdltnmdgv vtvtprsida etyvegqris
      481 ettmlqsgmk vqfgsshvfk fvdptqdhii skrstdaslm vkgprhrtga vqettfdleg
      541 dihsgtafpa skstsrldgd rtssasstae rgmvkpmiri dqqdyrreds rsqdthgpep
      601 ilpasiefre ssedaflsai inytnsstvh fklsptyvly mtcryvlssq yrpditpaer
      661 thkviaivnk mvnmmegviq kqkniagala fwmanasell nfikqdrdls ritvdaqdvl
      721 ahlvqmafky lvhclqseln nympaflddp eennpqrpki ddvlhtltga msllrrcrvn
      781 aaltiqlfsq lfhfinmwlf nrlvtapdsg lcshywgaim rqqlghieaw aekqglelaa
      841 dchlsrivqa ttlltmdkys hadvpninst cfklnslqlq allqnyhcap deplipteli
      901 envvtvaent adelarsdgr evqleedpdl hlpfllpedg yscdvvrnvp sglqefldpl
      961 cqrgfcrltp hprspgtwti yfegadyesh lphenaelaq plrkepeiit vtlkkqngmg
     1021 lsivaakgag qdklgiyvks vvkggaadvd grlaagdqll svdgrslvgl sqeraaelmt
     1081 rtgsvvtlev akqgaiyhgl atllnqpspm mqrvsdrhgs gkprpksegf elynnstqng
     1141 spespqlpwt eysepkklpg ddrlmknrad hrsspnvanq ppspggknay asgtttkits
     1201 vstgnlctee qvlpprpeay piptqtytre yftfpasksq drmgpaqsqw pnyeekpqlq
     1261 aesnhsintt mqrvarsqee lrdevfqper nrlevvirkd veyidrksds dqwmnssvds
     1321 stssqehlnh sskpvspgsc ltksgpgrwk tpatsqptpv aisqpirtdl ppppppppvh
     1381 yaaefdelqm dlplpppppp nqigaqassq vaaaerkkre ehqrwyekek arleeererk
     1441 rreqerklgq mrsqplisaq pvaspvslqq vksekpstlq rsqetvirel qpqqqprtie
     1501 rrdlqyitis keelssgdsl spdpwkrdak eklekqqqmh ivdmlskeiq elqnkpdrta
     1561 eendrlrklm lewqfqkrlq eskqkdeddd eeeddevdtm limqrleaer rarlqdeerr
     1621 rqqqleemrk reaedrarqe eerrqqeeer trreaeekrr qeeeyysrle aerrrqhdea
     1681 errllepdep glyrpplpre yelpsltpss napppppqrn tsylktqvls pdtiytakfv
     1741 aynddddeee edsnlagiis ytgstgaaag evyrdprdkr sksqdadlpg apenltfrer
     1801 qrlfsqgqdv snkvkasrkl melenelntk
//
LOCUS       XP_041324115            1829 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324115
VERSION     XP_041324115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1829
                     /product="afadin isoform X5"
                     /calculated_mol_wt=208372
     Region          22..134
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          250..350
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          387..505
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          613..934
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1007..1094
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1019..1025,1040,1043,1073,1077,1080..1081)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     CDS             1..1829
                     /gene="AFDN"
                     /coded_by="XM_041468181.1:430..5919"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgeerrldvd ekplvvqlnw
      121 nkddregrfv lknendtlpp kkaqsngpek qekegviqnf krtlskkekk ekkrrekeal
      181 rqasdkddrl lhgddienfr laaevykdmp etsftrtisn pevvmkrrrq qklekrmqef
      241 rssdgrpdsg gtlriyadsl kpnipyktil lsttdtadfa viealekygl ekenpkdyci
      301 arvmlppdaq hsddkgaket ildddecplq ifrewpsdkg ilvfqlkrrp pdyvpkktrk
      361 itdgkqlrgk ervdgsgygs clppeklpyl velspgrrnh fayynyhtye dgsdsrdkpk
      421 lyrlqlsvte vgtekfddns iqlfgpgiqp hhcdltnmdg vvtvtprsid aetyvegqri
      481 settmlqsgm kvqfgsshvf kfvdptqdhi iskrstdasl mvkgprhrtg avqettfdle
      541 gdihsgtafp askstsrldg drtssassta ergmvkpmir idqqdyrred srsqdthgpe
      601 pilpasiefr essedaflsa iinytnsstv hfklsptyvl ymtcryvlss qyrpditpae
      661 rthkviaivn kmvnmmegvi qkqkniagal afwmanasel lnfikqdrdl sritvdaqdv
      721 lahlvqmafk ylvhclqsel nnympafldd peennpqrpk iddvlhtltg amsllrrcrv
      781 naaltiqlfs qlfhfinmwl fnrlvtapds glcshywgai mrqqlghiea waekqglela
      841 adchlsrivq attlltmdky shadvpnins tcfklnslql qallqnyhca pdepliptel
      901 ienvvtvaen tadelarsdg revqleedpd lhlpfllped gyscdvvrnv psglqefldp
      961 lcqrgfcrlt phprspgtwt iyfegadyes hlphenaela qplrkepeii tvtlkkqngm
     1021 glsivaakga gqdklgiyvk svvkggaadv dgrlaagdql lsvdgrslvg lsqeraaelm
     1081 trtgsvvtle vakqgaiyhg latllnqpsp mmqrvsdrhg sgkprpkseg felynnstqn
     1141 gspespqlpw teysepkklp gddrlmknra dhrsspnvan qppspggkna yasgtttkit
     1201 svstgnlcte eqvlpprpea ypiptqtytr eyftfpasks qdrmgpaqsq wpnyeekpql
     1261 qaesnhsint tmqrvarsqe elrdevfqpe rnrlevvirk dveyidrksd sdqwmnssvd
     1321 sstssqehln hsskpvspgs cltksgpgrw ktpatsqptp vaisqpirtd lppppppppv
     1381 hyaaefdelq mdlplppppp pnqigaqass qvaaaerkkr eehqrwyeke karleeerer
     1441 krreqerklg qmrsqplisa qpvaspvslq qvksekpstl qrsqetvire lqpqqqprti
     1501 errdlqyiti skeelssgds lspdpwkrda keklekqqqm hivdmlskei qelqnkpdrt
     1561 aeendrlrkl mlewqfqkrl qeskqkdedd deeeddevdt mlimqrleae rrardeerrr
     1621 qqqleemrkr eaedrarqee errqqeeert rreaeekrrq eeeyysrlea errrqhdeae
     1681 rrllepdepg lyrpplprey elpsltpssn apppppqrnt sylktqvlsp dtiytakfva
     1741 ynddddeeee dsnlagiisy tgstgaaage vyrdprdkrs ksqdadlpga penltfrerq
     1801 rlfsqgqdvs nkvkasrklm elenelntk
//
LOCUS       XP_041324116            1828 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324116
VERSION     XP_041324116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1828
                     /product="afadin isoform X6"
                     /calculated_mol_wt=208243
     Region          22..133
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          249..349
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          386..504
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          612..933
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1006..1093
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1018..1024,1039,1042,1072,1076,1079..1080)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     CDS             1..1828
                     /gene="AFDN"
                     /coded_by="XM_041468182.1:430..5916"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgerrldvde kplvvqlnwn
      121 kddregrfvl knendtlppk kaqsngpekq ekegviqnfk rtlskkekke kkrrekealr
      181 qasdkddrll hgddienfrl aaevykdmpe tsftrtisnp evvmkrrrqq klekrmqefr
      241 ssdgrpdsgg tlriyadslk pnipyktill sttdtadfav iealekygle kenpkdycia
      301 rvmlppdaqh sddkgaketi ldddecplqi frewpsdkgi lvfqlkrrpp dyvpkktrki
      361 tdgkqlrgke rvdgsgygsc lppeklpylv elspgrrnhf ayynyhtyed gsdsrdkpkl
      421 yrlqlsvtev gtekfddnsi qlfgpgiqph hcdltnmdgv vtvtprsida etyvegqris
      481 ettmlqsgmk vqfgsshvfk fvdptqdhii skrstdaslm vkgprhrtga vqettfdleg
      541 dihsgtafpa skstsrldgd rtssasstae rgmvkpmiri dqqdyrreds rsqdthgpep
      601 ilpasiefre ssedaflsai inytnsstvh fklsptyvly mtcryvlssq yrpditpaer
      661 thkviaivnk mvnmmegviq kqkniagala fwmanasell nfikqdrdls ritvdaqdvl
      721 ahlvqmafky lvhclqseln nympaflddp eennpqrpki ddvlhtltga msllrrcrvn
      781 aaltiqlfsq lfhfinmwlf nrlvtapdsg lcshywgaim rqqlghieaw aekqglelaa
      841 dchlsrivqa ttlltmdkys hadvpninst cfklnslqlq allqnyhcap deplipteli
      901 envvtvaent adelarsdgr evqleedpdl hlpfllpedg yscdvvrnvp sglqefldpl
      961 cqrgfcrltp hprspgtwti yfegadyesh lphenaelaq plrkepeiit vtlkkqngmg
     1021 lsivaakgag qdklgiyvks vvkggaadvd grlaagdqll svdgrslvgl sqeraaelmt
     1081 rtgsvvtlev akqgaiyhgl atllnqpspm mqrvsdrhgs gkprpksegf elynnstqng
     1141 spespqlpwt eysepkklpg ddrlmknrad hrsspnvanq ppspggknay asgtttkits
     1201 vstgnlctee qvlpprpeay piptqtytre yftfpasksq drmgpaqsqw pnyeekpqlq
     1261 aesnhsintt mqrvarsqee lrdevfqper nrlevvirkd veyidrksds dqwmnssvds
     1321 stssqehlnh sskpvspgsc ltksgpgrwk tpatsqptpv aisqpirtdl ppppppppvh
     1381 yaaefdelqm dlplpppppp nqigaqassq vaaaerkkre ehqrwyekek arleeererk
     1441 rreqerklgq mrsqplisaq pvaspvslqq vksekpstlq rsqetvirel qpqqqprtie
     1501 rrdlqyitis keelssgdsl spdpwkrdak eklekqqqmh ivdmlskeiq elqnkpdrta
     1561 eendrlrklm lewqfqkrlq eskqkdeddd eeeddevdtm limqrleaer rardeerrrq
     1621 qqleemrkre aedrarqeee rrqqeeertr reaeekrrqe eeyysrleae rrrqhdeaer
     1681 rllepdepgl yrpplpreye lpsltpssna pppppqrnts ylktqvlspd tiytakfvay
     1741 nddddeeeed snlagiisyt gstgaaagev yrdprdkrsk sqdadlpgap enltfrerqr
     1801 lfsqgqdvsn kvkasrklme lenelntk
//
LOCUS       XP_041324117            1823 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324117
VERSION     XP_041324117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1823
                     /product="afadin isoform X7"
                     /calculated_mol_wt=207454
     Region          22..134
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          250..350
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          387..490
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          598..926
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          999..1086
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1011..1017,1032,1035,1065,1069,1072..1073)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1445..1682
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1823
                     /gene="AFDN"
                     /coded_by="XM_041468183.1:429..5900"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgeerrldvd ekplvvqlnw
      121 nkddregrfv lknendtlpp kkaqsngpek qekegviqnf krtlskkekk ekkrrekeal
      181 rqasdkddrl lhgddienfr laaevykdmp etsftrtisn pevvmkrrrq qklekrmqef
      241 rssdgrpdsg gtlriyadsl kpnipyktil lsttdtadfa viealekygl ekenpkdyci
      301 arvmlppdaq hsddkgaket ildddecplq ifrewpsdkg ilvfqlkrrp pdyvpkktrk
      361 itdgkqlrgk ervdgsgygs clppeklpyl velspdgsds rdkpklyrlq lsvtevgtek
      421 fddnsiqlfg pgiqphhcdl tnmdgvvtvt prsidaetyv egqrisettm lqsgmkvqfg
      481 sshvfkfvdp tqdhiiskrs tdaslmvkgp rhrtgavqet tfdlegdihs gtafpaskst
      541 srldgdrtss asstaergmv kpmiridqqd yrredsrsqd thgpepilpa siefressed
      601 aflsaiinyt nsstvhfkls ptyvlymtcr yvlssqyrpd itpaerthkv iaivnkmvnm
      661 megviqevdq vdqkqkniag alafwmanas ellnfikqdr dlsritvdaq dvlahlvqma
      721 fkylvhclqs elnnympafl ddpeennpqr pkiddvlhtl tgamsllrrc rvnaaltiql
      781 fsqlfhfinm wlfnrlvtap dsglcshywg aimrqqlghi eawaekqgle laadchlsri
      841 vqattlltmd kyshadvpni nstcfklnsl qlqallqnyh capdeplipt elienvvtva
      901 entadelars dgrevqleed pdlhlpfllp edgyscdvvr nvpsglqefl dplcqrgfcr
      961 ltphprspgt wtiyfegady eshlphenae laqplrkepe iitvtlkkqn gmglsivaak
     1021 gagqdklgiy vksvvkggaa dvdgrlaagd qllsvdgrsl vglsqeraae lmtrtgsvvt
     1081 levakqgaiy hglatllnqp spmmqrvsdr hgsgkprpks egfelynnst qngspespql
     1141 pwteysepkk lpgddrlmkn radhrsspnv anqppspggk nayasgtttk itsvstgnlc
     1201 teeqvlpprp eaypiptqty treyftfpas ksqdrmgpaq sqwpnyeekp qlqaesnhsi
     1261 nttmqrvars qeelrdevfq pernrlevvi rkdveyidrk sdsdqwmnss vdsstssqeh
     1321 lnhsskpvsp gscltksgpg rwktpatsqp tpvaisqpir tdlppppppp pvhyaaefde
     1381 lqmdlplppp pppnqigaqa ssqvaaaerk kreehqrwye kekarleeer erkrreqerk
     1441 lgqmrsqpli saqpvaspvs lqqvksekps tlqrsqetvi relqpqqqpr tierrdlqyi
     1501 tiskeelssg dslspdpwkr dakeklekqq qmhivdmlsk eiqelqnkpd rtaeendrlr
     1561 klmlewqfqk rlqeskqkde dddeeeddev dtmlimqrle aerrarlqde errrqqqlee
     1621 mrkreaedra rqeeerrqqe eertrreaee krrqeeeyys rleaerrrqh deaerrllep
     1681 depglyrppl preyelpslt pssnappppp qrntsylktq vlspdtiyta kfvayndddd
     1741 eeeedsnlag iisytgstga aagevyrdpr dkrsksqdad lpgapenltf rerqrlfsqg
     1801 qdvsnkvkas rklmelenel ntk
//
LOCUS       XP_041324118            1815 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324118
VERSION     XP_041324118.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468184.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1815
                     /product="afadin isoform X8"
                     /calculated_mol_wt=206511
     Region          22..133
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          249..349
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          386..489
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          597..918
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          991..1078
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1003..1009,1024,1027,1057,1061,1064..1065)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1437..1674
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1815
                     /gene="AFDN"
                     /coded_by="XM_041468184.1:429..5876"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgerrldvde kplvvqlnwn
      121 kddregrfvl knendtlppk kaqsngpekq ekegviqnfk rtlskkekke kkrrekealr
      181 qasdkddrll hgddienfrl aaevykdmpe tsftrtisnp evvmkrrrqq klekrmqefr
      241 ssdgrpdsgg tlriyadslk pnipyktill sttdtadfav iealekygle kenpkdycia
      301 rvmlppdaqh sddkgaketi ldddecplqi frewpsdkgi lvfqlkrrpp dyvpkktrki
      361 tdgkqlrgke rvdgsgygsc lppeklpylv elspdgsdsr dkpklyrlql svtevgtekf
      421 ddnsiqlfgp giqphhcdlt nmdgvvtvtp rsidaetyve gqrisettml qsgmkvqfgs
      481 shvfkfvdpt qdhiiskrst daslmvkgpr hrtgavqett fdlegdihsg tafpasksts
      541 rldgdrtssa sstaergmvk pmiridqqdy rredsrsqdt hgpepilpas iefresseda
      601 flsaiinytn sstvhfklsp tyvlymtcry vlssqyrpdi tpaerthkvi aivnkmvnmm
      661 egviqkqkni agalafwman asellnfikq drdlsritvd aqdvlahlvq mafkylvhcl
      721 qselnnympa flddpeennp qrpkiddvlh tltgamsllr rcrvnaalti qlfsqlfhfi
      781 nmwlfnrlvt apdsglcshy wgaimrqqlg hieawaekqg lelaadchls rivqattllt
      841 mdkyshadvp ninstcfkln slqlqallqn yhcapdepli ptelienvvt vaentadela
      901 rsdgrevqle edpdlhlpfl lpedgyscdv vrnvpsglqe fldplcqrgf crltphprsp
      961 gtwtiyfega dyeshlphen aelaqplrke peiitvtlkk qngmglsiva akgagqdklg
     1021 iyvksvvkgg aadvdgrlaa gdqllsvdgr slvglsqera aelmtrtgsv vtlevakqga
     1081 iyhglatlln qpspmmqrvs drhgsgkprp ksegfelynn stqngspesp qlpwteysep
     1141 kklpgddrlm knradhrssp nvanqppspg gknayasgtt tkitsvstgn lcteeqvlpp
     1201 rpeaypiptq tytreyftfp asksqdrmgp aqsqwpnyee kpqlqaesnh sinttmqrva
     1261 rsqeelrdev fqpernrlev virkdveyid rksdsdqwmn ssvdsstssq ehlnhsskpv
     1321 spgscltksg pgrwktpats qptpvaisqp irtdlppppp pppvhyaaef delqmdlplp
     1381 pppppnqiga qassqvaaae rkkreehqrw yekekarlee ererkrreqe rklgqmrsqp
     1441 lisaqpvasp vslqqvksek pstlqrsqet virelqpqqq prtierrdlq yitiskeels
     1501 sgdslspdpw krdakeklek qqqmhivdml skeiqelqnk pdrtaeendr lrklmlewqf
     1561 qkrlqeskqk dedddeeedd evdtmlimqr leaerrarlq deerrrqqql eemrkreaed
     1621 rarqeeerrq qeeertrrea eekrrqeeey ysrleaerrr qhdeaerrll epdepglyrp
     1681 plpreyelps ltpssnappp ppqrntsylk tqvlspdtiy takfvayndd ddeeeedsnl
     1741 agiisytgst gaaagevyrd prdkrsksqd adlpgapenl tfrerqrlfs qgqdvsnkvk
     1801 asrklmelen elntk
//
LOCUS       XP_041324119            1784 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041324119
VERSION     XP_041324119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1784
                     /product="afadin isoform X9"
                     /calculated_mol_wt=203229
     Region          22..134
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          250..350
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          387..505
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          613..941
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1014..1101
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1026..1032,1047,1050,1080,1084,1087..1088)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     CDS             1..1784
                     /gene="AFDN"
                     /coded_by="XM_041468185.1:428..5782"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgeerrldvd ekplvvqlnw
      121 nkddregrfv lknendtlpp kkaqsngpek qekegviqnf krtlskkekk ekkrrekeal
      181 rqasdkddrl lhgddienfr laaevykdmp etsftrtisn pevvmkrrrq qklekrmqef
      241 rssdgrpdsg gtlriyadsl kpnipyktil lsttdtadfa viealekygl ekenpkdyci
      301 arvmlppdaq hsddkgaket ildddecplq ifrewpsdkg ilvfqlkrrp pdyvpkktrk
      361 itdgkqlrgk ervdgsgygs clppeklpyl velspgrrnh fayynyhtye dgsdsrdkpk
      421 lyrlqlsvte vgtekfddns iqlfgpgiqp hhcdltnmdg vvtvtprsid aetyvegqri
      481 settmlqsgm kvqfgsshvf kfvdptqdhi iskrstdasl mvkgprhrtg avqettfdle
      541 gdihsgtafp askstsrldg drtssassta ergmvkpmir idqqdyrred srsqdthgpe
      601 pilpasiefr essedaflsa iinytnsstv hfklsptyvl ymtcryvlss qyrpditpae
      661 rthkviaivn kmvnmmegvi qevdqvdqkq kniagalafw manasellnf ikqdrdlsri
      721 tvdaqdvlah lvqmafkylv hclqselnny mpaflddpee nnpqrpkidd vlhtltgams
      781 llrrcrvnaa ltiqlfsqlf hfinmwlfnr lvtapdsglc shywgaimrq qlghieawae
      841 kqglelaadc hlsrivqatt lltmdkysha dvpninstcf klnslqlqal lqnyhcapde
      901 pliptelien vvtvaentad elarsdgrev qleedpdlhl pfllpedgys cdvvrnvpsg
      961 lqefldplcq rgfcrltphp rspgtwtiyf egadyeshlp henaelaqpl rkepeiitvt
     1021 lkkqngmgls ivaakgagqd klgiyvksvv kggaadvdgr laagdqllsv dgrslvglsq
     1081 eraaelmtrt gsvvtlevak qgaiyhglat llnqpspmmq rvsdrhgsgk prpksegfel
     1141 ynnstqngsp espqlpwtey sepkklpgdd rlmknradhr sspnvanqpp spggknayas
     1201 gtttkitsvs tgnlcteeqv lpprpeaypi ptqtytreyf tfpasksqdr mgpaqsqwpn
     1261 yeekpqlqae snhsinttmq rvarsqeelr devfqpernr levvirkdve yidrksdsdq
     1321 wmnssvdsst ssqehlnhss kpvspgsclt ksgpgrwktp atsqptpvai sqpirtdlpp
     1381 ppppppvhya aefdelqmdl plppppppnq igaqassqva aaerkkreeh qrwyekekar
     1441 leeererkrr eqerklgqmr sqplisaqpv aspvslqqvk sekpstlqrs qetvirelqp
     1501 qqqprtierr dlqyitiske elssgdslsp dpwkrdakek lekqqqmhiv dmlskeiqel
     1561 qnkpdrtaee ndrlrklmle wqfqkrlqes kqkdedddee eddevdtmli mqrleaerra
     1621 rqtavpaisv ldllqdeerr rqqqleemrk reaedrarqe eerrqqeeer trreaeekrr
     1681 qeeeyysrle aerrrqhdea errllepdep giisytgstg aaagevyrdp rdkrsksqda
     1741 dlpgapenlt frerqrlfsq gqdvsnkvka srklmelene lntk
//
LOCUS       XP_041324120            1777 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041324120
VERSION     XP_041324120.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468186.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1777
                     /product="afadin isoform X10"
                     /calculated_mol_wt=202490
     Region          22..134
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          250..350
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          387..505
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          613..941
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1014..1101
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1026..1032,1047,1050,1080,1084,1087..1088)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     CDS             1..1777
                     /gene="AFDN"
                     /coded_by="XM_041468186.1:427..5760"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgeerrldvd ekplvvqlnw
      121 nkddregrfv lknendtlpp kkaqsngpek qekegviqnf krtlskkekk ekkrrekeal
      181 rqasdkddrl lhgddienfr laaevykdmp etsftrtisn pevvmkrrrq qklekrmqef
      241 rssdgrpdsg gtlriyadsl kpnipyktil lsttdtadfa viealekygl ekenpkdyci
      301 arvmlppdaq hsddkgaket ildddecplq ifrewpsdkg ilvfqlkrrp pdyvpkktrk
      361 itdgkqlrgk ervdgsgygs clppeklpyl velspgrrnh fayynyhtye dgsdsrdkpk
      421 lyrlqlsvte vgtekfddns iqlfgpgiqp hhcdltnmdg vvtvtprsid aetyvegqri
      481 settmlqsgm kvqfgsshvf kfvdptqdhi iskrstdasl mvkgprhrtg avqettfdle
      541 gdihsgtafp askstsrldg drtssassta ergmvkpmir idqqdyrred srsqdthgpe
      601 pilpasiefr essedaflsa iinytnsstv hfklsptyvl ymtcryvlss qyrpditpae
      661 rthkviaivn kmvnmmegvi qevdqvdqkq kniagalafw manasellnf ikqdrdlsri
      721 tvdaqdvlah lvqmafkylv hclqselnny mpaflddpee nnpqrpkidd vlhtltgams
      781 llrrcrvnaa ltiqlfsqlf hfinmwlfnr lvtapdsglc shywgaimrq qlghieawae
      841 kqglelaadc hlsrivqatt lltmdkysha dvpninstcf klnslqlqal lqnyhcapde
      901 pliptelien vvtvaentad elarsdgrev qleedpdlhl pfllpedgys cdvvrnvpsg
      961 lqefldplcq rgfcrltphp rspgtwtiyf egadyeshlp henaelaqpl rkepeiitvt
     1021 lkkqngmgls ivaakgagqd klgiyvksvv kggaadvdgr laagdqllsv dgrslvglsq
     1081 eraaelmtrt gsvvtlevak qgaiyhglat llnqpspmmq rgkprpkseg felynnstqn
     1141 gspespqlpw teysepkklp gddrlmknra dhrsspnvan qppspggkna yasgtttkit
     1201 svstgnlcte eqvlpprpea ypiptqtytr eyftfpasks qdrmgpaqsq wpnyeekpql
     1261 qaesnhsint tmqrvarsqe elrdevfqpe rnrlevvirk dveyidrksd sdqwmnssvd
     1321 sstssqehln hsskpvspgs cltksgpgrw ktpatsqptp vaisqpirtd lppppppppv
     1381 hyaaefdelq mdlplppppp pnqigaqass qvaaaerkkr eehqrwyeke karleeerer
     1441 krreqerklg qmrsqplisa qpvaspvslq qvksekpstl qrsqetvire lqpqqqprti
     1501 errdlqyiti skeelssgds lspdpwkrda keklekqqqm hivdmlskei qelqnkpdrt
     1561 aeendrlrkl mlewqfqkrl qeskqkdedd deeeddevdt mlimqrleae rrarqtavpa
     1621 isvldllqde errrqqqlee mrkreaedra rqeeerrqqe eertrreaee krrqeeeyys
     1681 rleaerrrqh deaerrllep depgiisytg stgaaagevy rdprdkrsks qdadlpgape
     1741 nltfrerqrl fsqgqdvsnk vkasrklmel enelntk
//
LOCUS       XP_041324121            1772 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041324121
VERSION     XP_041324121.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468187.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1772
                     /product="afadin isoform X11"
                     /calculated_mol_wt=202020
     Region          22..134
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          250..350
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          387..505
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          613..941
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          1014..1101
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1026..1032,1047,1050,1080,1084,1087..1088)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1460..1692
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1772
                     /gene="AFDN"
                     /coded_by="XM_041468187.1:426..5744"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgeerrldvd ekplvvqlnw
      121 nkddregrfv lknendtlpp kkaqsngpek qekegviqnf krtlskkekk ekkrrekeal
      181 rqasdkddrl lhgddienfr laaevykdmp etsftrtisn pevvmkrrrq qklekrmqef
      241 rssdgrpdsg gtlriyadsl kpnipyktil lsttdtadfa viealekygl ekenpkdyci
      301 arvmlppdaq hsddkgaket ildddecplq ifrewpsdkg ilvfqlkrrp pdyvpkktrk
      361 itdgkqlrgk ervdgsgygs clppeklpyl velspgrrnh fayynyhtye dgsdsrdkpk
      421 lyrlqlsvte vgtekfddns iqlfgpgiqp hhcdltnmdg vvtvtprsid aetyvegqri
      481 settmlqsgm kvqfgsshvf kfvdptqdhi iskrstdasl mvkgprhrtg avqettfdle
      541 gdihsgtafp askstsrldg drtssassta ergmvkpmir idqqdyrred srsqdthgpe
      601 pilpasiefr essedaflsa iinytnsstv hfklsptyvl ymtcryvlss qyrpditpae
      661 rthkviaivn kmvnmmegvi qevdqvdqkq kniagalafw manasellnf ikqdrdlsri
      721 tvdaqdvlah lvqmafkylv hclqselnny mpaflddpee nnpqrpkidd vlhtltgams
      781 llrrcrvnaa ltiqlfsqlf hfinmwlfnr lvtapdsglc shywgaimrq qlghieawae
      841 kqglelaadc hlsrivqatt lltmdkysha dvpninstcf klnslqlqal lqnyhcapde
      901 pliptelien vvtvaentad elarsdgrev qleedpdlhl pfllpedgys cdvvrnvpsg
      961 lqefldplcq rgfcrltphp rspgtwtiyf egadyeshlp henaelaqpl rkepeiitvt
     1021 lkkqngmgls ivaakgagqd klgiyvksvv kggaadvdgr laagdqllsv dgrslvglsq
     1081 eraaelmtrt gsvvtlevak qgaiyhglat llnqpspmmq rvsdrhgsgk prpksegfel
     1141 ynnstqngsp espqlpwtey sepkklpgdd rlmknradhr sspnvanqpp spggknayas
     1201 gtttkitsvs tgnlcteeqv lpprpeaypi ptqtytreyf tfpasksqdr mgpaqsqwpn
     1261 yeekpqlqae snhsinttmq rvarsqeelr devfqpernr levvirkdve yidrksdsdq
     1321 wmnssvdsst ssqehlnhss kpvspgsclt ksgpgrwktp atsqptpvai sqpirtdlpp
     1381 ppppppvhya aefdelqmdl plppppppnq igaqassqva aaerkkreeh qrwyekekar
     1441 leeererkrr eqerklgqmr sqplisaqpv aspvslqqvk sekpstlqrs qetvirelqp
     1501 qqqprtierr dlqyitiske elssgdslsp dpwkrdakek lekqqqmhiv dmlskeiqel
     1561 qnkpdrtaee ndrlrklmle wqfqkrlqes kqkdedddee eddevdtmli mqrleaerra
     1621 rlqdeerrrq qqleemrkre aedrarqeee rrqqeeertr reaeekrrqe eeyysrleae
     1681 rrrqhdeaer rllepdepgi isytgstgaa agevyrdprd krsksqdadl pgapenltfr
     1741 erqrlfsqgq dvsnkvkasr klmeleneln tk
//
LOCUS       XP_041324122            1749 aa            linear   VRT 06-MAY-2021
DEFINITION  afadin isoform X12 [Pyrgilauda ruficollis].
ACCESSION   XP_041324122
VERSION     XP_041324122.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468188.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1749
                     /product="afadin isoform X12"
                     /calculated_mol_wt=199104
     Region          22..133
                     /region_name="RA1_Afadin"
                     /note="Ras-associating (RA) domain 1 found in Afadin;
                     cd01782"
                     /db_xref="CDD:340480"
     Site            order(46,60,80)
                     /site_type="other"
                     /note="RA - Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:340480"
     Region          249..349
                     /region_name="RA2_Afadin"
                     /note="Ras-associating (RA) domain 2 found in Afadin;
                     cd01781"
                     /db_xref="CDD:340479"
     Region          386..489
                     /region_name="FHA_AFDN"
                     /note="forkhead associated (FHA) domain found in afadin
                     and similar proteins; cd22711"
                     /db_xref="CDD:438763"
     Region          597..918
                     /region_name="Myo5p-like_CBD_afadin"
                     /note="cargo binding domain of myosin 5-like of afadin;
                     cd15471"
                     /db_xref="CDD:271255"
     Region          991..1078
                     /region_name="PDZ_AFDN-like"
                     /note="PDZ domain of afadin (AFDN), and related domains;
                     cd06789"
                     /db_xref="CDD:467251"
     Site            order(1003..1009,1024,1027,1057,1061,1064..1065)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467251"
     Region          <1437..1669
                     /region_name="DUF4670"
                     /note="Domain of unknown function (DUF4670); pfam15709"
                     /db_xref="CDD:464815"
     CDS             1..1749
                     /gene="AFDN"
                     /coded_by="XM_041468188.1:426..5675"
                     /db_xref="GeneID:121353955"
ORIGIN      
        1 msgggggree errkladiin hwnanrldlf eisdptedle fhgvmrfyfq dkaagnfatk
       61 cirvsstatt qdvietlaek frpdmrmlss pkyslyevhv sgerrldvde kplvvqlnwn
      121 kddregrfvl knendtlppk kaqsngpekq ekegviqnfk rtlskkekke kkrrekealr
      181 qasdkddrll hgddienfrl aaevykdmpe tsftrtisnp evvmkrrrqq klekrmqefr
      241 ssdgrpdsgg tlriyadslk pnipyktill sttdtadfav iealekygle kenpkdycia
      301 rvmlppdaqh sddkgaketi ldddecplqi frewpsdkgi lvfqlkrrpp dyvpkktrki
      361 tdgkqlrgke rvdgsgygsc lppeklpylv elspdgsdsr dkpklyrlql svtevgtekf
      421 ddnsiqlfgp giqphhcdlt nmdgvvtvtp rsidaetyve gqrisettml qsgmkvqfgs
      481 shvfkfvdpt qdhiiskrst daslmvkgpr hrtgavqett fdlegdihsg tafpasksts
      541 rldgdrtssa sstaergmvk pmiridqqdy rredsrsqdt hgpepilpas iefresseda
      601 flsaiinytn sstvhfklsp tyvlymtcry vlssqyrpdi tpaerthkvi aivnkmvnmm
      661 egviqkqkni agalafwman asellnfikq drdlsritvd aqdvlahlvq mafkylvhcl
      721 qselnnympa flddpeennp qrpkiddvlh tltgamsllr rcrvnaalti qlfsqlfhfi
      781 nmwlfnrlvt apdsglcshy wgaimrqqlg hieawaekqg lelaadchls rivqattllt
      841 mdkyshadvp ninstcfkln slqlqallqn yhcapdepli ptelienvvt vaentadela
      901 rsdgrevqle edpdlhlpfl lpedgyscdv vrnvpsglqe fldplcqrgf crltphprsp
      961 gtwtiyfega dyeshlphen aelaqplrke peiitvtlkk qngmglsiva akgagqdklg
     1021 iyvksvvkgg aadvdgrlaa gdqllsvdgr slvglsqera aelmtrtgsv vtlevakqga
     1081 iyhglatlln qpspmmqrvs drhgsgkprp ksegfelynn stqngspesp qlpwteysep
     1141 kklpgddrlm knradhrssp nvanqppspg gknayasgtt tkitsvstgn lcteeqvlpp
     1201 rpeaypiptq tytreyftfp asksqdrmgp aqsqwpnyee kpqlqaesnh sinttmqrva
     1261 rsqeelrdev fqpernrlev virkdveyid rksdsdqwmn ssvdsstssq ehlnhsskpv
     1321 spgscltksg pgrwktpats qptpvaisqp irtdlppppp pppvhyaaef delqmdlplp
     1381 pppppnqiga qassqvaaae rkkreehqrw yekekarlee ererkrreqe rklgqmrsqp
     1441 lisaqpvasp vslqqvksek pstlqrsqet virelqpqqq prtierrdlq yitiskeels
     1501 sgdslspdpw krdakeklek qqqmhivdml skeiqelqnk pdrtaeendr lrklmlewqf
     1561 qkrlqeskqk dedddeeedd evdtmlimqr leaerrarlq deerrrqqql eemrkreaed
     1621 rarqeeerrq qeeertrrea eekrrqeeey ysrleaerrr qhdeaerrll epdepgiisy
     1681 tgstgaaage vyrdprdkrs ksqdadlpga penltfrerq rlfsqgqdvs nkvkasrklm
     1741 elenelntk
//
LOCUS       XP_041324123             587 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF25 [Pyrgilauda ruficollis].
ACCESSION   XP_041324123
VERSION     XP_041324123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468189.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="kinesin-like protein KIF25"
                     /calculated_mol_wt=65698
     Region          <13..>171
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          171..570
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(181..182,267..274,389..390,476..481)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     CDS             1..587
                     /gene="KIF25"
                     /coded_by="XM_041468189.1:5..1768"
                     /db_xref="GeneID:121353956"
ORIGIN      
        1 mmrphrgfdp ssvwaqrlrq leqrlrtkee rivvletena vlrlklaeyq glagrstnev
       61 lqlyaahgqq mkfqrssvlt qlhgaikrlk qdlkslhsfa lelskdfqle sktclyqvla
      121 avqgiqlqne amqmfqikaf dleqslqevt eryekekqkr kalhnsliel rgnirvhcri
      181 rpllpfddga ghsqdrqinf sekvayaadd etvlvkcsrp ghasvnktfq fervyneles
      241 qdavfadvsp lltslldgyn vcimaygqtg sgktytmlgp qlegnlafai edeselgiip
      301 ratqevfrli sekppgsywv evsvvevynn eifdllakds cgkvfgvkrd vvttregksd
      361 vpllthetve naseflhlvn kglqlrvthp tlvhahssrs hlvvtltitt vvfgdnfgtl
      421 wedehtsqrl nkeasftfpq kmrdnkstss srasspvqle atekmkqvkt rlqlvdlags
      481 ecvgmsgvtg aalretsfin rslsaladvl gaiaeqrahi pyrnsklthl lqdyvggdak
      541 llvmlcispg qkyltesvqs lgfgtrarqv qrgqvkkknl pvpskgk
//
LOCUS       XP_041324125             609 aa            linear   VRT 06-MAY-2021
DEFINITION  FERM domain-containing protein 6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324125
VERSION     XP_041324125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468191.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="FERM domain-containing protein 6-like"
                     /calculated_mol_wt=69195
     Region          15..111
                     /region_name="FERM_F1_FRMD1"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 1 (FRMD1); cd17197"
                     /db_xref="CDD:340717"
     Region          109..225
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          218..326
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(232,249,251,261)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(265,270..273,305,309,312..313)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            305..316
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..609
                     /gene="LOC121353957"
                     /coded_by="XM_041468191.1:269..2098"
                     /db_xref="GeneID:121353957"
ORIGIN      
        1 msrtllagrm qpeirsicvf lptreqlsla vgvkatgqel fqqvcdlvki kephffglsv
       61 vknneyvfid leqklskyfs kewkkettkg tekfsppfva ffrvqyyien grvigdkvar
      121 qlyychlkeq vlmshcnhke eiyfllaays lqadlgnyre klhagkyfep qayfpqwiia
      181 krgsdyilkh apemhreqqg lsakeavlkf ikesclledv pvhfyrlqkd kkedrptvil
      241 gltlrgmhiy qevnhvrqll ydfpwshigk laflgkkfei qpdglpsark lvyytgcpfr
      301 srhllqllsn shrlflniqp vlkqiqklee aeekkryres yisdtldmdl dpcdknshgs
      361 gssggsrrdn rlsrqstgsh gsshtsgiea dsrhrvsvem svdepfstdh mhrkkksyss
      421 tisygssgid sgskgqaedd tqddelelav depeempvde pleghqleea tvgesveslp
      481 ldaasgqain qeslsvvqvt likmrgqsve slhqvrspks rscmdqhsqs lddirlykrr
      541 hpslsatlss dtshsytfgc sledtlslyg cvystadckt ksalygkrsm nclsldllgd
      601 dqlpeefvv
//
LOCUS       XP_041324126             609 aa            linear   VRT 06-MAY-2021
DEFINITION  FERM domain-containing protein 6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324126
VERSION     XP_041324126.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468192.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="FERM domain-containing protein 6-like"
                     /calculated_mol_wt=69195
     Region          15..111
                     /region_name="FERM_F1_FRMD1"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in FERM domain-containing
                     protein 1 (FRMD1); cd17197"
                     /db_xref="CDD:340717"
     Region          109..225
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          218..326
                     /region_name="FERM_C_FRMD1_FRMD6"
                     /note="FERM domain C-lobe of FERM domain containing 1 and
                     6 proteins; cd13185"
                     /db_xref="CDD:270006"
     Site            order(232,249,251,261)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270006"
     Site            order(265,270..273,305,309,312..313)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     Site            305..316
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270006"
     CDS             1..609
                     /gene="LOC121353957"
                     /coded_by="XM_041468192.1:200..2029"
                     /db_xref="GeneID:121353957"
ORIGIN      
        1 msrtllagrm qpeirsicvf lptreqlsla vgvkatgqel fqqvcdlvki kephffglsv
       61 vknneyvfid leqklskyfs kewkkettkg tekfsppfva ffrvqyyien grvigdkvar
      121 qlyychlkeq vlmshcnhke eiyfllaays lqadlgnyre klhagkyfep qayfpqwiia
      181 krgsdyilkh apemhreqqg lsakeavlkf ikesclledv pvhfyrlqkd kkedrptvil
      241 gltlrgmhiy qevnhvrqll ydfpwshigk laflgkkfei qpdglpsark lvyytgcpfr
      301 srhllqllsn shrlflniqp vlkqiqklee aeekkryres yisdtldmdl dpcdknshgs
      361 gssggsrrdn rlsrqstgsh gsshtsgiea dsrhrvsvem svdepfstdh mhrkkksyss
      421 tisygssgid sgskgqaedd tqddelelav depeempvde pleghqleea tvgesveslp
      481 ldaasgqain qeslsvvqvt likmrgqsve slhqvrspks rscmdqhsqs lddirlykrr
      541 hpslsatlss dtshsytfgc sledtlslyg cvystadckt ksalygkrsm nclsldllgd
      601 dqlpeefvv
//
LOCUS       XP_041324127             745 aa            linear   VRT 06-MAY-2021
DEFINITION  la-related protein 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324127
VERSION     XP_041324127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..745
                     /product="la-related protein 4 isoform X1"
                     /calculated_mol_wt=81504
     Region          132..206
                     /region_name="LARP_4"
                     /note="La RNA-binding domain of La-related protein 4;
                     cd08035"
                     /db_xref="CDD:153404"
     Site            order(138,141..142,147,150..151,153,172..174)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153404"
     Region          211..287
                     /region_name="RRM_LARP4"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     La-related protein 4 (LARP4); cd12707"
                     /db_xref="CDD:410106"
     CDS             1..745
                     /gene="LARP4"
                     /coded_by="XM_041468193.1:241..2478"
                     /db_xref="GeneID:121353958"
ORIGIN      
        1 mlsdvnkerl katllmeqvt skgaglnpna kvwqevpqgs geavpptngt ehtwqetaaa
       61 qgtpaegnie isedsckqye vmyspsceap rngagadeas angivlated lgyqiyevsg
      121 dgsstvsted ireclrkqle fcfsrenlsk dlylmsqmds dqfvpiwtia nmegikkltt
      181 dmdlilevlr sspmvqvder gekvrpnhkr ciiilreipe ttpieevkal fknencpkvi
      241 scefahnnnw yvtfqsdtda qqafkylree vktfqgkpvm arikaintff akngyrvvds
      301 svypqpvqtq aqfasplfmq pvyspqqysi ysivpqtwsp npapyfetpl apfpnggfvn
      361 gfntpgsykt naaslsigrp fhrnrvkphf rssgssehpe gppgagalpm gdlsrtssrn
      421 fvmerhsgsl sghqdqgysq kdspaaqleq ngdygvgrgr rnvfrgrrrr eddrvsrpqp
      481 saetktqtpk fdllasnfpp lpgstakilg epvlesrmsd ivkgvckeke skdslcpcpa
      541 papdeqtpsa aqppvpsvss psqtepvvls tvqpeskpee vsapkdvasp asppasvcpi
      601 saakpprtnt sspsaqasaa palstqeprk lsyaevcqkp pkepppvpvq plrehraniv
      661 ppakneengt lekapekaph erapheraph egrmkdysgf rgsgaprgaa gkireqrrqf
      721 grrsspqgap rrvgkeqyvp prspk
//
LOCUS       XP_041324128             744 aa            linear   VRT 06-MAY-2021
DEFINITION  la-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324128
VERSION     XP_041324128.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468194.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..744
                     /product="la-related protein 4 isoform X2"
                     /calculated_mol_wt=81376
     Region          131..205
                     /region_name="LARP_4"
                     /note="La RNA-binding domain of La-related protein 4;
                     cd08035"
                     /db_xref="CDD:153404"
     Site            order(137,140..141,146,149..150,152,171..173)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153404"
     Region          210..286
                     /region_name="RRM_LARP4"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     La-related protein 4 (LARP4); cd12707"
                     /db_xref="CDD:410106"
     CDS             1..744
                     /gene="LARP4"
                     /coded_by="XM_041468194.1:241..2475"
                     /db_xref="GeneID:121353958"
ORIGIN      
        1 mlsdvnkerl katllmevts kgaglnpnak vwqevpqgsg eavpptngte htwqetaaaq
       61 gtpaegniei sedsckqyev myspsceapr ngagadeasa ngivlatedl gyqiyevsgd
      121 gsstvstedi reclrkqlef cfsrenlskd lylmsqmdsd qfvpiwtian megikklttd
      181 mdlilevlrs spmvqvderg ekvrpnhkrc iiilreipet tpieevkalf knencpkvis
      241 cefahnnnwy vtfqsdtdaq qafkylreev ktfqgkpvma rikaintffa kngyrvvdss
      301 vypqpvqtqa qfasplfmqp vyspqqysiy sivpqtwspn papyfetpla pfpnggfvng
      361 fntpgsyktn aaslsigrpf hrnrvkphfr ssgssehpeg ppgagalpmg dlsrtssrnf
      421 vmerhsgsls ghqdqgysqk dspaaqleqn gdygvgrgrr nvfrgrrrre ddrvsrpqps
      481 aetktqtpkf dllasnfppl pgstakilge pvlesrmsdi vkgvckekes kdslcpcpap
      541 apdeqtpsaa qppvpsvssp sqtepvvlst vqpeskpeev sapkdvaspa sppasvcpis
      601 aakpprtnts spsaqasaap alstqeprkl syaevcqkpp kepppvpvqp lrehranivp
      661 pakneengtl ekapekaphe rapheraphe grmkdysgfr gsgaprgaag kireqrrqfg
      721 rrsspqgapr rvgkeqyvpp rspk
//
LOCUS       XP_041324129             385 aa            linear   VRT 06-MAY-2021
DEFINITION  la-related protein 4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324129
VERSION     XP_041324129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468195.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..385
                     /product="la-related protein 4 isoform X3"
                     /calculated_mol_wt=42883
     Region          132..206
                     /region_name="LARP_4"
                     /note="La RNA-binding domain of La-related protein 4;
                     cd08035"
                     /db_xref="CDD:153404"
     Site            order(138,141..142,147,150..151,153,172..174)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153404"
     Region          211..287
                     /region_name="RRM_LARP4"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     La-related protein 4 (LARP4); cd12707"
                     /db_xref="CDD:410106"
     CDS             1..385
                     /gene="LARP4"
                     /coded_by="XM_041468195.1:875..2032"
                     /db_xref="GeneID:121353958"
ORIGIN      
        1 mlsdvnkerl katllmeqvt skgaglnpna kvwqevpqgs geavpptngt ehtwqetaaa
       61 qgtpaegnie isedsckqye vmyspsceap rngagadeas angivlated lgyqiyevsg
      121 dgsstvsted ireclrkqle fcfsrenlsk dlylmsqmds dqfvpiwtia nmegikkltt
      181 dmdlilevlr sspmvqvder gekvrpnhkr ciiilreipe ttpieevkal fknencpkvi
      241 scefahnnnw yvtfqsdtda qqafkylree vktfqgkpvm arikaintff akngyrvvds
      301 svypqpvqtq aqfasplfmq pvyspqqysi ysivpqtwsp npapyfetpl apfpnggfvn
      361 gfntpgsykt naaslsigrp fhrnr
//
LOCUS       XP_041324130            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  disco-interacting protein 2 homolog B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324130
VERSION     XP_041324130.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468196.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="disco-interacting protein 2 homolog B isoform
                     X1"
                     /calculated_mol_wt=170476
     Region          8..130
                     /region_name="DMAP_binding"
                     /note="DMAP1-binding Domain; pfam06464"
                     /db_xref="CDD:368923"
     Region          350..926
                     /region_name="Dip2"
                     /note="Disco-interacting protein 2 (Dip2); cd05905"
                     /db_xref="CDD:341231"
     Site            order(511,514..519,521..522)
                     /site_type="other"
                     /note="putative acyl-activating enzyme (AAE) consensus
                     motif"
                     /db_xref="CDD:341231"
     Site            order(514,634..635,693..698,791,803,806,817,906)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Site            order(514,555..556,606,608..609,612,634..635,653..658,791,
                     803,806,814..817,887)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341231"
     Site            order(555,608..609,612,634,814..816,874,887)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Region          1002..1567
                     /region_name="Dip2"
                     /note="Disco-interacting protein 2 (Dip2); cd05905"
                     /db_xref="CDD:341231"
     Site            order(1151,1154..1159,1161..1162)
                     /site_type="other"
                     /note="putative acyl-activating enzyme (AAE) consensus
                     motif"
                     /db_xref="CDD:341231"
     Site            order(1154,1280..1281,1335..1340,1432,1454,1457,1468,1547)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Site            order(1154,1195..1196,1246,1248..1249,1252,1280..1281,
                     1298..1303,1432,1454,1457,1465..1468,1528)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341231"
     Site            order(1195,1248..1249,1252,1280,1465..1467,1515,1528)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341231"
     CDS             1..1571
                     /gene="DIP2B"
                     /coded_by="XM_041468196.1:44..4759"
                     /db_xref="GeneID:121353959"
ORIGIN      
        1 maepaavssl prevreqlae lelelsegdi tqkgyekkra kllapyvpqt qgvdpalqke
       61 pkpqmpvpsa aptsasssss sskfhrarsg garderyrsd ihteavqaal akhkeqkmal
      121 pmptkrrstf vqspadactp pdtssasede gslrrqaals aalhqslqna eswinrsvqg
      181 sstsssasst lshgegkgts gsladvfant riesfsvppd vtattstpsa rpaaidlpps
      241 givkgmhkgs nrsslmdtad gvpvssrvst kiqqllntlk rpkrpplkef fvddfeeive
      301 vpqpdpnqpk pegrqmtpvk geplgvvcnw ppaleaalqr wgttqakcpc ltaldvtgkp
      361 vytltygklw srslklaytl lnklgtknep vlkpgdrval vypnndpvmf mvafygclla
      421 evipvpievp ltrkdaggqq igfllgscgi alalttevcl kglpktqnge ivqfkgwprl
      481 kwvvtdskyl skspkdwqpn isaagtepay ieyktskegs vmgvtvsrva mlahcqalsq
      541 acnysegeti vnvldfkkda glwhgiltnv mnklhtisvp ysvmktcpls wvqrvhahka
      601 kvalvkcrdl hwammahrdq rdvslsslrm livtdganpw svsscdafls lfqshglkpe
      661 aicpcatspe amtvairrpg vpgaplpgra ilsmnglsfg virvntedkn saltvqdvgh
      721 vmpggmmciv kpdgppqlck tdeigeicvs sraggmmyyg lagvtkntfe vipvnssgsp
      781 vgevpfvrsg llgfvgpgsl vfvvgkmdgl ltvsgrrhna ddivatglav esiktvyrgr
      841 iavfsvsvfy derivvvaeq rpdaseedsf qwmsrvlqai dsihqvgvyc lalvpantlp
      901 ktplggihis qtkqhflegs lhpcnilmcp htcvtnlpkp rqkqpgvgpa svmvgnlvag
      961 kriaqasgrd lgqiedndlv kkhqfltevl qwraqatpdh plflllnakg ttvctatclq
     1021 lhkkaerias vlcdkghlna gdnvvllypp gielitafyg clysgcvpvt vrpphaqslv
     1081 atlptvrmiv evskaacilt tqtlmrllks reaagavdvk twptiidtdd lprkrlaqiy
     1141 kpptpemlay ldfsvsttgm ltgvkmshaa vsglcraikl qcelyssrqi aicldpycgl
     1201 gfvlwclcsv ysghqsilip pmelesnlfl wlstvsqyki rdtfcsysvm elctkglgnq
     1261 vemlkargin lscvrtcvvv aeerprvslt hsfsklfkdi glssravstt fgsrvnvaic
     1321 lqgtsgpdpt tvyvdlkslr hdrvrlverg apqslllses gkilpgvkvv ivnpetkgpl
     1381 gdshlgeiwv nsphtasgyy tiydnetlqa dhfntrlsfg daaqtlwart gylgfvrrte
     1441 ltaasgerhd alyvvgalde tlelrglryh pidietsvsr thrsiaecav ftwtnllvvv
     1501 velcgceqea ldlvplvtnv vleehylivg vvvvvdpgvi pinsrgekqr mhlrdsflad
     1561 qldpiyvayn m
//
LOCUS       XP_041324131            1565 aa            linear   VRT 06-MAY-2021
DEFINITION  disco-interacting protein 2 homolog B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324131
VERSION     XP_041324131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468197.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1565
                     /product="disco-interacting protein 2 homolog B isoform
                     X2"
                     /calculated_mol_wt=169782
     Region          8..130
                     /region_name="DMAP_binding"
                     /note="DMAP1-binding Domain; pfam06464"
                     /db_xref="CDD:368923"
     Region          350..920
                     /region_name="Dip2"
                     /note="Disco-interacting protein 2 (Dip2); cd05905"
                     /db_xref="CDD:341231"
     Site            order(505,508..513,515..516)
                     /site_type="other"
                     /note="putative acyl-activating enzyme (AAE) consensus
                     motif"
                     /db_xref="CDD:341231"
     Site            order(508,628..629,687..692,785,797,800,811,900)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Site            order(508,549..550,600,602..603,606,628..629,647..652,785,
                     797,800,808..811,881)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341231"
     Site            order(549,602..603,606,628,808..810,868,881)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Region          996..1561
                     /region_name="Dip2"
                     /note="Disco-interacting protein 2 (Dip2); cd05905"
                     /db_xref="CDD:341231"
     Site            order(1145,1148..1153,1155..1156)
                     /site_type="other"
                     /note="putative acyl-activating enzyme (AAE) consensus
                     motif"
                     /db_xref="CDD:341231"
     Site            order(1148,1274..1275,1329..1334,1426,1448,1451,1462,1541)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Site            order(1148,1189..1190,1240,1242..1243,1246,1274..1275,
                     1292..1297,1426,1448,1451,1459..1462,1522)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341231"
     Site            order(1189,1242..1243,1246,1274,1459..1461,1509,1522)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341231"
     CDS             1..1565
                     /gene="DIP2B"
                     /coded_by="XM_041468197.1:44..4741"
                     /db_xref="GeneID:121353959"
ORIGIN      
        1 maepaavssl prevreqlae lelelsegdi tqkgyekkra kllapyvpqt qgvdpalqke
       61 pkpqmpvpsa aptsasssss sskfhrarsg garderyrsd ihteavqaal akhkeqkmal
      121 pmptkrrstf vqspadactp pdtssasede gslrrqaals aalhqslqna eswinrsvqg
      181 sstsssasst lshgegkgts gsladvfant riesfsvppd vtattstpsa rpaaidlpps
      241 givkgmhkgs nrsslmdtad gvpvssrvst kiqqllntlk rpkrpplkef fvddfeeive
      301 vpqpdpnqpk pegrqmtpvk geplgvvcnw ppaleaalqr wgttqakcpc ltaldvtgkp
      361 vytltygklw srslklaytl lnklgtknep vlkpgdrval vypnndpvmf mvafygclla
      421 evipvpieda ggqqigfllg scgialaltt evclkglpkt qngeivqfkg wprlkwvvtd
      481 skylskspkd wqpnisaagt epayieykts kegsvmgvtv srvamlahcq alsqacnyse
      541 getivnvldf kkdaglwhgi ltnvmnklht isvpysvmkt cplswvqrvh ahkakvalvk
      601 crdlhwamma hrdqrdvsls slrmlivtdg anpwsvsscd aflslfqshg lkpeaicpca
      661 tspeamtvai rrpgvpgapl pgrailsmng lsfgvirvnt edknsaltvq dvghvmpggm
      721 mcivkpdgpp qlcktdeige icvssraggm myyglagvtk ntfevipvns sgspvgevpf
      781 vrsgllgfvg pgslvfvvgk mdglltvsgr rhnaddivat glavesiktv yrgriavfsv
      841 svfyderivv vaeqrpdase edsfqwmsrv lqaidsihqv gvyclalvpa ntlpktplgg
      901 ihisqtkqhf legslhpcni lmcphtcvtn lpkprqkqpg vgpasvmvgn lvagkriaqa
      961 sgrdlgqied ndlvkkhqfl tevlqwraqa tpdhplflll nakgttvcta tclqlhkkae
     1021 riasvlcdkg hlnagdnvvl lyppgielit afygclysgc vpvtvrppha qslvatlptv
     1081 rmivevskaa cilttqtlmr llksreaaga vdvktwptii dtddlprkrl aqiykpptpe
     1141 mlayldfsvs ttgmltgvkm shaavsglcr aiklqcelys srqiaicldp ycglgfvlwc
     1201 lcsvysghqs ilippmeles nlflwlstvs qykirdtfcs ysvmelctkg lgnqvemlka
     1261 rginlscvrt cvvvaeerpr vslthsfskl fkdiglssra vsttfgsrvn vaiclqgtsg
     1321 pdpttvyvdl kslrhdrvrl vergapqsll lsesgkilpg vkvvivnpet kgplgdshlg
     1381 eiwvnsphta sgyytiydne tlqadhfntr lsfgdaaqtl wartgylgfv rrteltaasg
     1441 erhdalyvvg aldetlelrg lryhpidiet svsrthrsia ecavftwtnl lvvvvelcgc
     1501 eqealdlvpl vtnvvleehy livgvvvvvd pgvipinsrg ekqrmhlrds fladqldpiy
     1561 vaynm
//
LOCUS       XP_041324132            1500 aa            linear   VRT 06-MAY-2021
DEFINITION  disco-interacting protein 2 homolog B isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324132
VERSION     XP_041324132.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468198.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1500
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1500
                     /product="disco-interacting protein 2 homolog B isoform
                     X3"
                     /calculated_mol_wt=163241
     Region          8..130
                     /region_name="DMAP_binding"
                     /note="DMAP1-binding Domain; pfam06464"
                     /db_xref="CDD:368923"
     Region          279..855
                     /region_name="Dip2"
                     /note="Disco-interacting protein 2 (Dip2); cd05905"
                     /db_xref="CDD:341231"
     Site            order(440,443..448,450..451)
                     /site_type="other"
                     /note="putative acyl-activating enzyme (AAE) consensus
                     motif"
                     /db_xref="CDD:341231"
     Site            order(443,563..564,622..627,720,732,735,746,835)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Site            order(443,484..485,535,537..538,541,563..564,582..587,720,
                     732,735,743..746,816)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341231"
     Site            order(484,537..538,541,563,743..745,803,816)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Region          931..1496
                     /region_name="Dip2"
                     /note="Disco-interacting protein 2 (Dip2); cd05905"
                     /db_xref="CDD:341231"
     Site            order(1080,1083..1088,1090..1091)
                     /site_type="other"
                     /note="putative acyl-activating enzyme (AAE) consensus
                     motif"
                     /db_xref="CDD:341231"
     Site            order(1083,1209..1210,1264..1269,1361,1383,1386,1397,1476)
                     /site_type="other"
                     /note="putative AMP binding site [chemical binding]"
                     /db_xref="CDD:341231"
     Site            order(1083,1124..1125,1175,1177..1178,1181,1209..1210,
                     1227..1232,1361,1383,1386,1394..1397,1457)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:341231"
     Site            order(1124,1177..1178,1181,1209,1394..1396,1444,1457)
                     /site_type="other"
                     /note="putative CoA binding site [chemical binding]"
                     /db_xref="CDD:341231"
     CDS             1..1500
                     /gene="DIP2B"
                     /coded_by="XM_041468198.1:44..4546"
                     /db_xref="GeneID:121353959"
ORIGIN      
        1 maepaavssl prevreqlae lelelsegdi tqkgyekkra kllapyvpqt qgvdpalqke
       61 pkpqmpvpsa aptsasssss sskfhrarsg garderyrsd ihteavqaal akhkeqkmal
      121 pmptkrrstf vqspadactp pesfsvppdv tattstpsar paaidlppsg ivkgmhkgsn
      181 rsslmdtadg vpvssrvstk iqqllntlkr pkrpplkeff vddfeeivev pqpdpnqpkp
      241 egrqmtpvkg eplgvvcnwp paleaalqrw gttqakcpcl taldvtgkpv ytltygklws
      301 rslklaytll nklgtknepv lkpgdrvalv ypnndpvmfm vafygcllae vipvpievpl
      361 trkdaggqqi gfllgscgia lalttevclk glpktqngei vqfkgwprlk wvvtdskyls
      421 kspkdwqpni saagtepayi eyktskegsv mgvtvsrvam lahcqalsqa cnysegetiv
      481 nvldfkkdag lwhgiltnvm nklhtisvpy svmktcplsw vqrvhahkak valvkcrdlh
      541 wammahrdqr dvslsslrml ivtdganpws vsscdaflsl fqshglkpea icpcatspea
      601 mtvairrpgv pgaplpgrai lsmnglsfgv irvntedkns altvqdvghv mpggmmcivk
      661 pdgppqlckt deigeicvss raggmmyygl agvtkntfev ipvnssgspv gevpfvrsgl
      721 lgfvgpgslv fvvgkmdgll tvsgrrhnad divatglave siktvyrgri avfsvsvfyd
      781 erivvvaeqr pdaseedsfq wmsrvlqaid sihqvgvycl alvpantlpk tplggihisq
      841 tkqhflegsl hpcnilmcph tcvtnlpkpr qkqpgvgpas vmvgnlvagk riaqasgrdl
      901 gqiedndlvk khqfltevlq wraqatpdhp lflllnakgt tvctatclql hkkaeriasv
      961 lcdkghlnag dnvvllyppg ielitafygc lysgcvpvtv rpphaqslva tlptvrmive
     1021 vskaaciltt qtlmrllksr eaagavdvkt wptiidtddl prkrlaqiyk pptpemlayl
     1081 dfsvsttgml tgvkmshaav sglcraiklq celyssrqia icldpycglg fvlwclcsvy
     1141 sghqsilipp melesnlflw lstvsqykir dtfcsysvme lctkglgnqv emlkarginl
     1201 scvrtcvvva eerprvslth sfsklfkdig lssravsttf gsrvnvaicl qgtsgpdptt
     1261 vyvdlkslrh drvrlverga pqslllsesg kilpgvkvvi vnpetkgplg dshlgeiwvn
     1321 sphtasgyyt iydnetlqad hfntrlsfgd aaqtlwartg ylgfvrrtel taasgerhda
     1381 lyvvgaldet lelrglryhp idietsvsrt hrsiaecavf twtnllvvvv elcgceqeal
     1441 dlvplvtnvv leehylivgv vvvvdpgvip insrgekqrm hlrdsfladq ldpiyvaynm
//
LOCUS       XP_041324133             318 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-dependent transcription factor ATF-1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324133
VERSION     XP_041324133.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468199.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="cyclic AMP-dependent transcription factor ATF-1
                     isoform X1"
                     /calculated_mol_wt=34032
     Region          <102..132
                     /region_name="pKID"
                     /note="pKID domain; pfam02173"
                     /db_xref="CDD:396650"
     Region          262..316
                     /region_name="bZIP_CREB1"
                     /note="Basic leucine zipper (bZIP) domain of Cyclic
                     AMP-responsive element-binding protein 1 (CREB1) and
                     similar proteins: a DNA-binding and dimerization domain;
                     cd14690"
                     /db_xref="CDD:269838"
     Region          263..315
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269838"
     Site            order(263,267,269..271,273..275,277..278,280..282)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269838"
     Site            order(281,284,288..289,291..292,295..296,298..299,302,
                     305..306,309..310,312..313)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269838"
     CDS             1..318
                     /gene="ATF1"
                     /coded_by="XM_041468199.1:216..1172"
                     /db_xref="GeneID:121353960"
ORIGIN      
        1 mmeevhkggs sssvtsqpsa vqgttlqaaq lshiaqqmsl rgsapltvvq lpgeqvqvqg
       61 viqtaqsssv ihspqvqtvq vsslseseds qdssdsigss qkargilarr psyrkilkdl
      121 ssedtrdrkg deespgvstv tsmsvptpiy qtstgqyiai aanglqlagp gadgvqglqt
      181 ltmanaggsq pgttilqyaq tsdgqqilvp snqvvvqtas gdmqtyqirt tpttsslpqt
      241 vvmtspvtlt sqssktddpq lkreirlmkn reaarecrrk kkeyvkclen rvavlenqnk
      301 tlieelktlk dlychksv
//
LOCUS       XP_041324135             318 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-dependent transcription factor ATF-1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324135
VERSION     XP_041324135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468201.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="cyclic AMP-dependent transcription factor ATF-1
                     isoform X1"
                     /calculated_mol_wt=34032
     Region          <102..132
                     /region_name="pKID"
                     /note="pKID domain; pfam02173"
                     /db_xref="CDD:396650"
     Region          262..316
                     /region_name="bZIP_CREB1"
                     /note="Basic leucine zipper (bZIP) domain of Cyclic
                     AMP-responsive element-binding protein 1 (CREB1) and
                     similar proteins: a DNA-binding and dimerization domain;
                     cd14690"
                     /db_xref="CDD:269838"
     Region          263..315
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269838"
     Site            order(263,267,269..271,273..275,277..278,280..282)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269838"
     Site            order(281,284,288..289,291..292,295..296,298..299,302,
                     305..306,309..310,312..313)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269838"
     CDS             1..318
                     /gene="ATF1"
                     /coded_by="XM_041468201.1:216..1172"
                     /db_xref="GeneID:121353960"
ORIGIN      
        1 mmeevhkggs sssvtsqpsa vqgttlqaaq lshiaqqmsl rgsapltvvq lpgeqvqvqg
       61 viqtaqsssv ihspqvqtvq vsslseseds qdssdsigss qkargilarr psyrkilkdl
      121 ssedtrdrkg deespgvstv tsmsvptpiy qtstgqyiai aanglqlagp gadgvqglqt
      181 ltmanaggsq pgttilqyaq tsdgqqilvp snqvvvqtas gdmqtyqirt tpttsslpqt
      241 vvmtspvtlt sqssktddpq lkreirlmkn reaarecrrk kkeyvkclen rvavlenqnk
      301 tlieelktlk dlychksv
//
LOCUS       XP_041324136             281 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-dependent transcription factor ATF-1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324136
VERSION     XP_041324136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="cyclic AMP-dependent transcription factor ATF-1
                     isoform X2"
                     /calculated_mol_wt=30238
     Region          <65..95
                     /region_name="pKID"
                     /note="pKID domain; pfam02173"
                     /db_xref="CDD:396650"
     Region          225..279
                     /region_name="bZIP_CREB1"
                     /note="Basic leucine zipper (bZIP) domain of Cyclic
                     AMP-responsive element-binding protein 1 (CREB1) and
                     similar proteins: a DNA-binding and dimerization domain;
                     cd14690"
                     /db_xref="CDD:269838"
     Region          226..278
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269838"
     Site            order(226,230,232..234,236..238,240..241,243..245)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269838"
     Site            order(244,247,251..252,254..255,258..259,261..262,265,
                     268..269,272..273,275..276)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269838"
     CDS             1..281
                     /gene="ATF1"
                     /coded_by="XM_041468202.1:213..1058"
                     /db_xref="GeneID:121353960"
ORIGIN      
        1 mslrgsaplt vvqlpgeqvq vqgviqtaqs ssvihspqvq tvqvsslses edsqdssdsi
       61 gssqkargil arrpsyrkil kdlssedtrd rkgdeespgv stvtsmsvpt piyqtstgqy
      121 iaiaanglql agpgadgvqg lqtltmanag gsqpgttilq yaqtsdgqqi lvpsnqvvvq
      181 tasgdmqtyq irttpttssl pqtvvmtspv tltsqssktd dpqlkreirl mknreaarec
      241 rrkkkeyvkc lenrvavlen qnktlieelk tlkdlychks v
//
LOCUS       XP_041324137             281 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic AMP-dependent transcription factor ATF-1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324137
VERSION     XP_041324137.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468203.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="cyclic AMP-dependent transcription factor ATF-1
                     isoform X2"
                     /calculated_mol_wt=30238
     Region          <65..95
                     /region_name="pKID"
                     /note="pKID domain; pfam02173"
                     /db_xref="CDD:396650"
     Region          225..279
                     /region_name="bZIP_CREB1"
                     /note="Basic leucine zipper (bZIP) domain of Cyclic
                     AMP-responsive element-binding protein 1 (CREB1) and
                     similar proteins: a DNA-binding and dimerization domain;
                     cd14690"
                     /db_xref="CDD:269838"
     Region          226..278
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269838"
     Site            order(226,230,232..234,236..238,240..241,243..245)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269838"
     Site            order(244,247,251..252,254..255,258..259,261..262,265,
                     268..269,272..273,275..276)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269838"
     CDS             1..281
                     /gene="ATF1"
                     /coded_by="XM_041468203.1:283..1128"
                     /db_xref="GeneID:121353960"
ORIGIN      
        1 mslrgsaplt vvqlpgeqvq vqgviqtaqs ssvihspqvq tvqvsslses edsqdssdsi
       61 gssqkargil arrpsyrkil kdlssedtrd rkgdeespgv stvtsmsvpt piyqtstgqy
      121 iaiaanglql agpgadgvqg lqtltmanag gsqpgttilq yaqtsdgqqi lvpsnqvvvq
      181 tasgdmqtyq irttpttssl pqtvvmtspv tltsqssktd dpqlkreirl mknreaarec
      241 rrkkkeyvkc lenrvavlen qnktlieelk tlkdlychks v
//
LOCUS       XP_041324138             878 aa            linear   VRT 06-MAY-2021
DEFINITION  rap guanine nucleotide exchange factor 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324138
VERSION     XP_041324138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468204.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..878
                     /product="rap guanine nucleotide exchange factor 3 isoform
                     X1"
                     /calculated_mol_wt=98623
     Region          55..180
                     /region_name="DEP_Epac"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in Epac-like proteins. Epac (exchange proteins
                     directly activated by cAMP) proteins are GEFs
                     (guanine-nucleotide-exchange factors) for the small
                     GTPases, Rap1 and Rap2. They are directly regulated by...;
                     cd04437"
                     /db_xref="CDD:239884"
     Region          204..313
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(268..269,278..280)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(301..303,307..309)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          341..458
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Region          613..878
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(646..648,659..660,662..664,666..667,670..671,674,
                     707,710..711,713..715,717..720,722..723,743,746,751..753,
                     756,769..771,774..776,778..780,782..784,799,803)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..878
                     /gene="RAPGEF3"
                     /coded_by="XM_041468204.1:141..2777"
                     /db_xref="GeneID:121353961"
ORIGIN      
        1 mhlfrsssye vrlegaggsl pliqgirwtp lldsessldy ghsitqasse kiwragkllf
       61 ahlstsrpgl irdhkhhlrh hrqccsgkdl vdwllsagva iqtrsqavgi gqvlvdggvl
      121 thvrqewhfq dkdtqfyrfa elelspepga gprdpeelle algflaqlgp dallsmalrk
      181 ppaqrtqdel elifeellhi kavahlsnsv krelaavlmf eghqragtvl fsqgdkgtsw
      241 yiiwkgsvnv vthgkglvat lhegddfgql alvndapraa tillrednch flrvdkqdfn
      301 rilkdveant vrlkehgkvv lvlqkdlqgg sgqaasaqss srylvmagtp ekilehllef
      361 mrldatlydp vdtllgdfll tytvfmptsq lcrallhhfr aeplegseqd katyslrkrr
      421 kilrlvsqwv llygrllqgd rsttallqnl adlasrdpql gglgqeqgqe rrrprtleng
      481 dgsvspqpka rssgmwspee aildstctlr aqdkvpyeif radhsclvsv lpvnaavrdv
      541 lralaprlrq drehvlvkvn sagdravlpq davgvftalg lnerlfvvsm delgnltphp
      601 eqlgphagss dtldlisskd lashltdydw nlfksihqve mihyivgphk frevatanla
      661 rvmrrfnelq fwvatelclc pelgrraqll rkfiklaahl keqknlnsff avmfgvsnta
      721 vtrlaktwer lphkirklhs alermldpsw nhrvyrlava klsppiipfv plllkdmtfi
      781 hegnrtlaen linfekmhmm aktvrvlqrc qghahaplsp lrsrsphrpe dakavristc
      841 seqslsvrnp vstwaylqhl raidsqkell rlsrelep
//
LOCUS       XP_041324139             877 aa            linear   VRT 06-MAY-2021
DEFINITION  rap guanine nucleotide exchange factor 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324139
VERSION     XP_041324139.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468205.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..877
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..877
                     /product="rap guanine nucleotide exchange factor 3 isoform
                     X2"
                     /calculated_mol_wt=98536
     Region          55..180
                     /region_name="DEP_Epac"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in Epac-like proteins. Epac (exchange proteins
                     directly activated by cAMP) proteins are GEFs
                     (guanine-nucleotide-exchange factors) for the small
                     GTPases, Rap1 and Rap2. They are directly regulated by...;
                     cd04437"
                     /db_xref="CDD:239884"
     Region          204..313
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(268..269,278..280)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(301..303,307..309)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          340..457
                     /region_name="RasGEFN"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal motif; smart00229"
                     /db_xref="CDD:214571"
     Region          612..877
                     /region_name="RasGEF"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     small GTPases; smart00147"
                     /db_xref="CDD:214539"
     Site            order(645..647,658..659,661..663,665..666,669..670,673,
                     706,709..710,712..714,716..719,721..722,742,745,750..752,
                     755,768..770,773..775,777..779,781..783,798,802)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..877
                     /gene="RAPGEF3"
                     /coded_by="XM_041468205.1:141..2774"
                     /db_xref="GeneID:121353961"
ORIGIN      
        1 mhlfrsssye vrlegaggsl pliqgirwtp lldsessldy ghsitqasse kiwragkllf
       61 ahlstsrpgl irdhkhhlrh hrqccsgkdl vdwllsagva iqtrsqavgi gqvlvdggvl
      121 thvrqewhfq dkdtqfyrfa elelspepga gprdpeelle algflaqlgp dallsmalrk
      181 ppaqrtqdel elifeellhi kavahlsnsv krelaavlmf eghqragtvl fsqgdkgtsw
      241 yiiwkgsvnv vthgkglvat lhegddfgql alvndapraa tillrednch flrvdkqdfn
      301 rilkdveant vrlkehgkvv lvlqkdlqgg sgqaasaqss rylvmagtpe kilehllefm
      361 rldatlydpv dtllgdfllt ytvfmptsql crallhhfra eplegseqdk atyslrkrrk
      421 ilrlvsqwvl lygrllqgdr sttallqnla dlasrdpqlg glgqeqgqer rrprtlengd
      481 gsvspqpkar ssgmwspeea ildstctlra qdkvpyeifr adhsclvsvl pvnaavrdvl
      541 ralaprlrqd rehvlvkvns agdravlpqd avgvftalgl nerlfvvsmd elgnltphpe
      601 qlgphagssd tldlisskdl ashltdydwn lfksihqvem ihyivgphkf revatanlar
      661 vmrrfnelqf wvatelclcp elgrraqllr kfiklaahlk eqknlnsffa vmfgvsntav
      721 trlaktwerl phkirklhsa lermldpswn hrvyrlavak lsppiipfvp lllkdmtfih
      781 egnrtlaenl infekmhmma ktvrvlqrcq ghahaplspl rsrsphrped akavristcs
      841 eqslsvrnpv stwaylqhlr aidsqkellr lsrelep
//
LOCUS       XP_041324140             631 aa            linear   VRT 06-MAY-2021
DEFINITION  rac GTPase-activating protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324140
VERSION     XP_041324140.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468206.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="rac GTPase-activating protein 1"
                     /calculated_mol_wt=70653
     Region          <13..>127
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          284..337
                     /region_name="C1_MgcRacGAP"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in male germ cell RacGap (MgcRacGAP) and similar
                     proteins; cd20821"
                     /db_xref="CDD:410371"
     Region          345..538
                     /region_name="RhoGAP_MgcRacGAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in MgcRacGAP proteins.
                     MgcRacGAP plays an important dual role in cytokinesis: i)
                     it is part of centralspindlin-complex, together with the
                     mitotic kinesin MKLP1, which is...; cd04382"
                     /db_xref="CDD:239847"
     Site            order(384,422,426,494,497..498,524)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239847"
     Site            384
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239847"
     Site            386
                     /site_type="active"
                     /note="activation site [active]"
                     /db_xref="CDD:239847"
     CDS             1..631
                     /gene="RACGAP1"
                     /coded_by="XM_041468206.1:84..1979"
                     /db_xref="GeneID:121353962"
ORIGIN      
        1 meiamvnlrg lyeqltrqae llsegnecqf iqlaknfeen rrkwqkteqe lgrykdllmk
       61 teaersaldv klkharnqvd veikrrqkae mdceklerqi qlirellmcd asgsiqlsee
      121 qksvlaflnr pqpslgsagn krlstidesg silsdisfdk sddsldwdss vvkavrlkrr
      181 ekrrssrqfa egppapqkks rsisstadqa nesivakttv mvpndggpie aistiqtmpy
      241 prrsrrksgp lqpwnsessi gskqleskqd tdgsstpqhn ggvrlhdfvs ktvikpescv
      301 pcgkrvkfgk islkcrdcrv vahpecrerc plpciptltg tpvrigegtl mdfvpstppm
      361 ipsiivhcvn eieqrglhet giyrisgcdk tvrelkekfl raknipllsk vddihaicgl
      421 lkdflrslke plltfrlnkt fmeaaeipde dnsiaamyqa vgelpqanrd tlaflmvhlq
      481 rvaqspdtkm disnlakvfg ptivahavpd pdpmtllqdt krqpkvverl lllpmdywsq
      541 lmmveqenid pahvientna ystprtpevq vsilgplttp ehqlsktpss sslsqrvrst
      601 fskttpkfgs ksksttqfgh qgnffaspml k
//
LOCUS       XP_041324141             527 aa            linear   VRT 06-MAY-2021
DEFINITION  acid-sensing ion channel 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324141
VERSION     XP_041324141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..527
                     /product="acid-sensing ion channel 1"
                     /calculated_mol_wt=59902
     Region          20..509
                     /region_name="ENaC"
                     /note="sodium channel transporter; TIGR00859"
                     /db_xref="CDD:273304"
     CDS             1..527
                     /gene="ASIC1"
                     /coded_by="XM_041468207.1:5..1588"
                     /db_xref="GeneID:121353963"
ORIGIN      
        1 mmdlkvdeee vdsgqpvsiq afassstlhg lshifsyerl slkrvvwalc flgslallal
       61 vctnriqyyf lyphvtklde vaatrltfpa vtfcnlnefr fsrvtkndly hagellalln
      121 nryeipdiqt adekqleilq dkanfrnfkp kpfnmlefyd raghdireml lscffrgeqc
      181 tpedfkvvft rygkcytfna gqdgkprlit mkggtgngle imldiqqdey lpvwgetdet
      241 sfeagikvqi hsqdepplid qlgfgvapgf qtfvscqeqr liylpppwgd ckavagdsef
      301 ydtysitacr idcetrylve ncncrmvhmp gdapyctpeq ykecadpald flvekdneyc
      361 icempcnmtr ygkelsmvki pskasakyla kkynkseqyi genilvldif fealnyetie
      421 qkkayevagl lgdiggqmgl figasiltvl elfdyayevi khrlcrrgkc rknhkrnntd
      481 kgvalsmddv krhnpcesir ghpagmtyaa nilphhparg tfedftc
//
LOCUS       XP_041324142             453 aa            linear   VRT 06-MAY-2021
DEFINITION  SWI/SNF-related matrix-associated actin-dependent regulator of
            chromatin subfamily D member 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324142
VERSION     XP_041324142.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468208.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="SWI/SNF-related matrix-associated
                     actin-dependent regulator of chromatin subfamily D member
                     1"
                     /calculated_mol_wt=52266
     Region          232..308
                     /region_name="SWIB_BAF60A"
                     /note="SWIB domain found in BRG1-associated factor 60A
                     (BAF60A) and similar proteins; cd17674"
                     /db_xref="CDD:349493"
     Site            order(251,254..255,257..258,261..262,267,272..273,275,292,
                     295..296)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:349493"
     CDS             1..453
                     /gene="SMARCD1"
                     /coded_by="XM_041468208.1:35..1396"
                     /db_xref="GeneID:121353964"
ORIGIN      
        1 mlpggrlapq gpamgppgyg gspavrpala qagldqarkr papqqlqqvq pqavpnrnhn
       61 akkkkmadki lpqrirelvp esqaymdlla ferkldqtim rkrldiqeal krpikqkrkl
      121 rifisntfnp aksdvedgeg tvaswelrve grlledsals kydatkqkrk fssffkslvi
      181 eldkdlygpd nhlvewhrta ttqetdgfqv krpgdvnvrc tvllmldyqp pqfkldprla
      241 rllgihtqtr pviiqalwqy ikthklqdph erefvicdky lqqifesqrm kfseipqrlh
      301 allmppepii inhvisvdpn dqkktacydi dvevddtlkt qmnsfllsta sqqeiaaldn
      361 kihetietin qlktqrefml sfardpqgfi ndwlqsqcrd lktmtdvvgn peeerraefy
      421 fqpwaqeavc ryfyskvqqr rqeleqalgi rnt
//
LOCUS       XP_041324144             391 aa            linear   VRT 06-MAY-2021
DEFINITION  ceramide synthase 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324144
VERSION     XP_041324144.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468210.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="ceramide synthase 5 isoform X1"
                     /calculated_mol_wt=45283
     Region          87..134
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          138..331
                     /region_name="TRAM_LAG1_CLN8"
                     /note="TLC domain; pfam03798"
                     /db_xref="CDD:461055"
     CDS             1..391
                     /gene="CERS5"
                     /coded_by="XM_041468210.1:68..1243"
                     /db_xref="GeneID:121353965"
ORIGIN      
        1 maaaaaaalr awfwnerfwl phnvtwadla gepgsglqyp raahvlsafp lalgifavrl
       61 lferfiakpc ainlgiqdsg phraqpnail ekvftsitks pdgkrlegls kqldwdvrki
      121 qrwfrhrrnq dkpttltkfc esmwrftfyf giffygirfl wtapwfwdtr qcwynypfqp
      181 ltsrlyyyyi lelafywslm fsqftdikrk dflimfvhhl atiglitfsy mnnmvrvgtl
      241 vlclhdasdf lleaaklany akyqrlcdaf fmlfgvvfiv trlgiypfwi lnttlfeswe
      301 ligpypswwl fngllvtlqv lhviwsylii rtaskalvrg kvskddrsdv essseeedvt
      361 snstkgifst ssngsnrlng hvaggqwtge e
//
LOCUS       XP_041324145             382 aa            linear   VRT 06-MAY-2021
DEFINITION  ceramide synthase 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324145
VERSION     XP_041324145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468211.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="ceramide synthase 5 isoform X2"
                     /calculated_mol_wt=43645
     Region          <92..125
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          129..322
                     /region_name="TRAM_LAG1_CLN8"
                     /note="TLC domain; pfam03798"
                     /db_xref="CDD:461055"
     CDS             1..382
                     /gene="CERS5"
                     /coded_by="XM_041468211.1:90..1238"
                     /db_xref="GeneID:121353965"
ORIGIN      
        1 mgraglalgr apvsvaaara rrrqaedggg rgggaaglvl eravlapaqr dvgrpgrrag
       61 qraavpagrs rplrlpagar hlrraaslre spdgkrlegl skqldwdvrk iqrwfrhrrn
      121 qdkpttltkf cesmwrftfy fgiffygirf lwtapwfwdt rqcwynypfq pltsrlyyyy
      181 ilelafywsl mfsqftdikr kdflimfvhh latiglitfs ymnnmvrvgt lvlclhdasd
      241 flleaaklan yakyqrlcda ffmlfgvvfi vtrlgiypfw ilnttlfesw eligpypsww
      301 lfngllvtlq vlhviwsyli irtaskalvr gkvskddrsd vessseeedv tsnstkgifs
      361 tssngsnrln ghvaggqwtg ee
//
LOCUS       XP_041324146             401 aa            linear   VRT 06-MAY-2021
DEFINITION  ceramide synthase 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324146
VERSION     XP_041324146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468212.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="ceramide synthase 5 isoform X3"
                     /calculated_mol_wt=46328
     Region          87..134
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          138..331
                     /region_name="TRAM_LAG1_CLN8"
                     /note="TLC domain; pfam03798"
                     /db_xref="CDD:461055"
     CDS             1..401
                     /gene="CERS5"
                     /coded_by="XM_041468212.1:68..1273"
                     /db_xref="GeneID:121353965"
ORIGIN      
        1 maaaaaaalr awfwnerfwl phnvtwadla gepgsglqyp raahvlsafp lalgifavrl
       61 lferfiakpc ainlgiqdsg phraqpnail ekvftsitks pdgkrlegls kqldwdvrki
      121 qrwfrhrrnq dkpttltkfc esmwrftfyf giffygirfl wtapwfwdtr qcwynypfqp
      181 ltsrlyyyyi lelafywslm fsqftdikrk dflimfvhhl atiglitfsy mnnmvrvgtl
      241 vlclhdasdf lleaaklany akyqrlcdaf fmlfgvvfiv trlgiypfwi lnttlfeswe
      301 ligpypswwl fngllvtlqv lhviwsylii rtaskalvrg kigagqfhpv hvskddrsdv
      361 essseeedvt snstkgifst ssngsnrlng hvaggqwtge e
//
LOCUS       XP_041324148             349 aa            linear   VRT 06-MAY-2021
DEFINITION  glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324148
VERSION     XP_041324148.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468214.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..349
                     /product="glycerol-3-phosphate dehydrogenase [NAD(+)],
                     cytoplasmic"
                     /calculated_mol_wt=37665
     Region          5..342
                     /region_name="glycerol3P_DH"
                     /note="glycerol-3-phosphate dehydrogenase (NAD(+));
                     TIGR03376"
                     /db_xref="CDD:274551"
     CDS             1..349
                     /gene="GPD1"
                     /coded_by="XM_041468214.1:61..1110"
                     /db_xref="GeneID:121353966"
ORIGIN      
        1 mggkkvcivg sgnwgsaiak iagsntarls sfenqvnmwv leeevggrrl tdiintehen
       61 vkylpghklp pnvvaepdll kacagadvll fvvphqfigk vcdqlkghvk keaigmslik
      121 gvdegpdglr lisdiihekl giemnvlmga niasevaeek fcettigckn mkhgqmlkdl
      181 mqtpnfrvsv vqeadtveic galknvvavg agfcdglgyg dntkaavirl glmemigfak
      241 lfckgpvtss tflescgvad littcyggrn rkvaeafakt gksieqleke mlngqklqgp
      301 qtsaelhril ksknavekfp lftavfrvcy egkpvtdfis clqnhpehm
//
LOCUS       XP_041324149             157 aa            linear   VRT 06-MAY-2021
DEFINITION  twist-related protein 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324149
VERSION     XP_041324149.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468215.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..157
                     /product="twist-related protein 2-like"
                     /calculated_mol_wt=17349
     Region          53..128
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     Site            order(71..72,74,79,98..99)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381392"
     Site            order(77..78,81..82,84..85,89,99..100,103..104,107,
                     109..110,113..114)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381392"
     CDS             1..157
                     /gene="LOC121353967"
                     /coded_by="XM_041468215.1:1308..1781"
                     /db_xref="GeneID:121353967"
ORIGIN      
        1 mkeenlspes pegsaatsed eaerlprksg rkrgqgpgga pspqgkrsrr spapqppeda
       61 haqrvianvr erqrtqslnd afaelrkiip tlpsdklski qtlklaaryi dflcqvlqsd
      121 eldhkvatsc nflaherlsy afsvwrmega wsmsash
//
LOCUS       XP_041324150              52 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly protein COX14 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324150
VERSION     XP_041324150.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468216.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..52
                     /product="cytochrome c oxidase assembly protein COX14
                     homolog"
                     /calculated_mol_wt=5807
     Region          1..>44
                     /region_name="COX14"
                     /note="Cytochrome oxidase c assembly; pfam14880"
                     /db_xref="CDD:434280"
     CDS             1..52
                     /gene="LOC121353968"
                     /coded_by="XM_041468216.1:158..316"
                     /db_xref="GeneID:121353968"
ORIGIN      
        1 mvskkqladf gykafsgsmm lltvyagylc svrvqrmlqh rrqrenapgp es
//
LOCUS       XP_041324151              52 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly protein COX14 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324151
VERSION     XP_041324151.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468217.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..52
                     /product="cytochrome c oxidase assembly protein COX14
                     homolog"
                     /calculated_mol_wt=5807
     Region          1..>44
                     /region_name="COX14"
                     /note="Cytochrome oxidase c assembly; pfam14880"
                     /db_xref="CDD:434280"
     CDS             1..52
                     /gene="LOC121353968"
                     /coded_by="XM_041468217.1:158..316"
                     /db_xref="GeneID:121353968"
ORIGIN      
        1 mvskkqladf gykafsgsmm lltvyagylc svrvqrmlqh rrqrenapgp es
//
LOCUS       XP_041324152             147 aa            linear   VRT 06-MAY-2021
DEFINITION  heme transporter HRG1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324152
VERSION     XP_041324152.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468218.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="heme transporter HRG1"
                     /calculated_mol_wt=15940
     Region          73..123
                     /region_name="HRG"
                     /note="Haem-transporter, endosomal/lysosomal,
                     haem-responsive gene; pfam16954"
                     /db_xref="CDD:465321"
     CDS             1..147
                     /gene="SLC48A1"
                     /coded_by="XM_041468218.1:204..647"
                     /db_xref="GeneID:121353970"
ORIGIN      
        1 malsgalalr vayasfgals glsafcawsv vpalrqpgta aagglsgvla lwalithvmy
       61 lqdywrtwlk glrfflsvgi lfsalsglgf caflalaitq hqsltdpksy ylscvwsfma
      121 lkwalllsly shryraefad isilsdf
//
LOCUS       XP_041324153             573 aa            linear   VRT 06-MAY-2021
DEFINITION  protein TESPA1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324153
VERSION     XP_041324153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..573
                     /product="protein TESPA1"
                     /calculated_mol_wt=59938
     Region          194..329
                     /region_name="KRAP_IP3R_bind"
                     /note="Ki-ras-induced actin-interacting
                     protein-IP3R-interacting domain; pfam14722"
                     /db_xref="CDD:464280"
     Region          <346..562
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..573
                     /gene="TESPA1"
                     /coded_by="XM_041468219.1:450..2171"
                     /db_xref="GeneID:121353971"
ORIGIN      
        1 megppvlgps swqrrrawar qsrgwsspeg ehekeeeeda eeeeeeeqaa avpweppqpd
       61 ravrggqgqp garegppgrv psrplcppga lcgsvrtwlr dcgaaaldep gswgpcargs
      121 sgtsledels sgaealllpg tpqaagrsqw errpnpgdst acsvpsgvps gvpsgvpssr
      181 rwgqgargsl srlcppggtv psrsllavla wcqsdaeeil hslgfvgsep gvasrvpprf
      241 fsgpsrasgi dlglflraqa rrlatedpcl llasrfqqvq alaaaadaff clyshvsrtp
      301 lqriapprpc rdipdsaerp gerlkravss lclytgagdn gdiprggtrg etpcprsard
      361 pgglragpgg apegsrgdsd tatgqwwpsp rpppagtawg hperscprgr gvwgrggasc
      421 parvargdtg tpsrvaaipe spaglrppgd pgldprchpg attragghla glrggpqglq
      481 ppgsvpkppe prgaaesfel eevlseeeed ndddddeeed ddddddddap eeaarsprpf
      541 istrrssllq grshssgfge eplppsappa rta
//
LOCUS       XP_041324154             425 aa            linear   VRT 06-MAY-2021
DEFINITION  fibrous sheath CABYR-binding protein-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324154
VERSION     XP_041324154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="fibrous sheath CABYR-binding protein-like
                     isoform X1"
                     /calculated_mol_wt=47266
     CDS             1..425
                     /gene="LOC121353972"
                     /coded_by="XM_041468220.1:1042..2319"
                     /db_xref="GeneID:121353972"
ORIGIN      
        1 mklwttllla glaslatarp veesswegll aelgnlldpa vlqevkekpq ellglldphe
       61 eplelldphe eplelldphe eplalldphe eplalldphe epvelldphe eplelldphe
      121 eplgllgslw pldpneesqe ledpevspee peepeessee seespeesee sdespeesee
      181 peespeesee peaspeesee peaspeesee peaspeesed peespeesee seespeesee
      241 speepeepee speeseesee speeseespe epeepeespe eseeseespe eseepeaspe
      301 esedpeesse eseepegspe eseepeaspe epeeseespe esedpeaspe esedpeespe
      361 eseelsvdpn vlvelaeklk eaqegekneg ilshlmdain wlvthlskhv fgcarglglq
      421 prgeq
//
LOCUS       XP_041324156             412 aa            linear   VRT 06-MAY-2021
DEFINITION  fibrous sheath CABYR-binding protein-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324156
VERSION     XP_041324156.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468222.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..412
                     /product="fibrous sheath CABYR-binding protein-like
                     isoform X2"
                     /calculated_mol_wt=45899
     CDS             1..412
                     /gene="LOC121353972"
                     /coded_by="XM_041468222.1:1042..2280"
                     /db_xref="GeneID:121353972"
ORIGIN      
        1 mklwttllla glaslatarp veesswegll aelgnlldpa vlqevkekpq ellglldphe
       61 eplelldphe eplelldphe eplalldphe eplalldphe epvelldphe eplelldphe
      121 eplgllgslw pldpneesqe ledpevspee peepeessee seespeesee sdespeesee
      181 peespeesee peaspeesee peaspeesee peaspeesed peespeesee seespeesee
      241 speepeepee speeseesee speeseespe epeepeespe eseeseespe eseepeaspe
      301 esedpeesse eseepegspe eseepeaspe epeeseespe esedpeaspe esedpeespe
      361 eseelsvdpn vlvelaeklk eaqegekneg ilshlmdain wlvthlskhv fg
//
LOCUS       XP_041324157             383 aa            linear   VRT 06-MAY-2021
DEFINITION  chemotaxis regulatory protein ChePep-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324157
VERSION     XP_041324157.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468223.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..383
                     /product="chemotaxis regulatory protein ChePep-like
                     isoform X3"
                     /calculated_mol_wt=42628
     CDS             1..383
                     /gene="LOC121353972"
                     /coded_by="XM_041468223.1:1042..2193"
                     /db_xref="GeneID:121353972"
ORIGIN      
        1 mklwttllla glaslatarp veesswegll aelgnlldpa vlqevkekpq ellglldphe
       61 eplelldphe eplelldphe eplalldphe eplalldphe epvelldphe eplelldphe
      121 eplgllgslw pldpneesqe ledpevspee peepeessee seespeesee sdespeesee
      181 peespeesee peaspeesee peaspeesee peaspeesed peespeesee seespeesee
      241 speepeepee speeseesee speeseespe epeepeespe eseeseespe eseepeaspe
      301 esedpeesse eseepegspe eseepeaspe epeeseespe esedpeaspe esedpeespe
      361 eseelsvdpn vlvelaeklk geq
//
LOCUS       XP_041324158             137 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium channel protein type 8 subunit alpha-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324158
VERSION     XP_041324158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468224.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="sodium channel protein type 8 subunit
                     alpha-like"
                     /calculated_mol_wt=15486
     CDS             1..137
                     /gene="LOC121353973"
                     /coded_by="XM_041468224.1:311..724"
                     /db_xref="GeneID:121353973"
ORIGIN      
        1 maarllappg pesfkpftpe slaniekhia elkkkqrskq dsshrddded skpkpnsdle
       61 agknlpfiyg dipkglvavp ledfdpyymt qktfvvlnrg ktlfrfsatp alyilspfnl
      121 frriaikili hsypfhd
//
LOCUS       XP_041324159             137 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium channel protein type 8 subunit alpha-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324159
VERSION     XP_041324159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="sodium channel protein type 8 subunit
                     alpha-like"
                     /calculated_mol_wt=15486
     CDS             1..137
                     /gene="LOC121353973"
                     /coded_by="XM_041468225.1:179..592"
                     /db_xref="GeneID:121353973"
ORIGIN      
        1 maarllappg pesfkpftpe slaniekhia elkkkqrskq dsshrddded skpkpnsdle
       61 agknlpfiyg dipkglvavp ledfdpyymt qktfvvlnrg ktlfrfsatp alyilspfnl
      121 frriaikili hsypfhd
//
LOCUS       XP_041324160             758 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain and actin-binding protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324160
VERSION     XP_041324160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468226.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="LIM domain and actin-binding protein 1 isoform
                     X1"
                     /calculated_mol_wt=83690
     Region          79..>238
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          390..442
                     /region_name="LIM_Eplin_alpha_beta"
                     /note="The Lim domain of Epithelial Protein Lost in
                     Neoplasm (Eplin); cd09485"
                     /db_xref="CDD:188869"
     Site            order(390,393,411,414,417,420,438,441)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188869"
     CDS             1..758
                     /gene="LIMA1"
                     /coded_by="XM_041468226.1:142..2418"
                     /db_xref="GeneID:121353974"
ORIGIN      
        1 mepspfnrrq wtsqslkita kelslvnknk ssalaerfsk yqkaaeeata ekkrsntenl
       61 pahftrgnls vlkkkwenpa lgaepgkeav rsscaevrhk vgtgrspsps pgagaapgrp
      121 qcpagdstep hsrsreggsm encvreprem ekpegserse spgriekynv pltklkmmfe
      181 kgeapqpkaa dgrlcpqqgp reprraavgr risenslsle dcdaaqgers hstagylvet
      241 spglspdkae trknldmprl setsikdrla kyqaavskqg sssgiipmse iqaseselkn
      301 ykseqkenma pvedssscqd gekvsvgens lslhsglled ghagqsesea eaqkpvspkq
      361 qnlgakaagq seasppkavk kfqlpmketc vgcqktvypm erlfanqqvf hiscfrcsyc
      421 nsklslgtya slrgniyckp hfnqlfkskg nydegfghkq hkelwagkte ceefpektvh
      481 gvnspdtpqs pgvedapiak vgvlaasmea kasavperee rpaetkklri awpppsdqsi
      541 qgsaldegik vlkpkwppee eiskpdvqed vdldlkklrr ssslkersrp ftvaasfrti
      601 svkghkpens pspskeerdt lkrseelere vviekkqkek kvehrniqna geknveeege
      661 lsgiktaeqn ivengqmnad tdeeehatee peipkeelle pnspkhssla nvvtakessp
      721 nqnrksqdvg fwegedmedl sveeqikrnr yyedddde
//
LOCUS       XP_041324161             749 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain and actin-binding protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324161
VERSION     XP_041324161.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468227.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..749
                     /product="LIM domain and actin-binding protein 1 isoform
                     X2"
                     /calculated_mol_wt=82778
     Region          381..433
                     /region_name="LIM_Eplin_alpha_beta"
                     /note="The Lim domain of Epithelial Protein Lost in
                     Neoplasm (Eplin); cd09485"
                     /db_xref="CDD:188869"
     Site            order(381,384,402,405,408,411,429,432)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188869"
     CDS             1..749
                     /gene="LIMA1"
                     /coded_by="XM_041468227.1:142..2391"
                     /db_xref="GeneID:121353974"
ORIGIN      
        1 mepspfnrrq wtsqslkita kelslvnknk ssalaerfsk yqkaaeeata ekkrsntenl
       61 pahftrgnls vlkkkwenpa lgaepgkeav rsscaevrhk vgtgrspsps pgagaapgrp
      121 qcpagdstep hsrsreggsm encvreprem ekpegserse spgriekynv pltklkmmfe
      181 kgeapqpkqg preprraavg rrisenslsl edcdaaqger shstagylve tspglspdka
      241 etrknldmpr lsetsikdrl akyqaavskq gsssgiipms eiqaseselk nykseqkenm
      301 apvedssscq dgekvsvgen slslhsglle dghagqsese aeaqkpvspk qqnlgakaag
      361 qseasppkav kkfqlpmket cvgcqktvyp merlfanqqv fhiscfrcsy cnsklslgty
      421 aslrgniyck phfnqlfksk gnydegfghk qhkelwagkt eceefpektv hgvnspdtpq
      481 spgvedapia kvgvlaasme akasavpere erpaetkklr iawpppsdqs iqgsaldegi
      541 kvlkpkwppe eeiskpdvqe dvdldlkklr rssslkersr pftvaasfrt isvkghkpen
      601 spspskeerd tlkrseeler evviekkqke kkvehrniqn ageknveeeg elsgiktaeq
      661 nivengqmna dtdeeehate epeipkeell epnspkhssl anvvtakess pnqnrksqdv
      721 gfwegedmed lsveeqikrn ryyedddde
//
LOCUS       XP_041324162             748 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain and actin-binding protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324162
VERSION     XP_041324162.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468228.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..748
                     /product="LIM domain and actin-binding protein 1 isoform
                     X3"
                     /calculated_mol_wt=82650
     Region          380..432
                     /region_name="LIM_Eplin_alpha_beta"
                     /note="The Lim domain of Epithelial Protein Lost in
                     Neoplasm (Eplin); cd09485"
                     /db_xref="CDD:188869"
     Site            order(380,383,401,404,407,410,428,431)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188869"
     CDS             1..748
                     /gene="LIMA1"
                     /coded_by="XM_041468228.1:142..2388"
                     /db_xref="GeneID:121353974"
ORIGIN      
        1 mepspfnrrq wtsqslkita kelslvnknk ssalaerfsk yqkaaeeata ekkrsntenl
       61 pahftrgnls vlkkkwenpa lgaepgkeav rsscaevrhk vgtgrspsps pgagaapgrp
      121 qcpagdstep hsrsreggsm encvreprem ekpegserse spgriekynv pltklkmmfe
      181 kgeapqpkgp reprraavgr risenslsle dcdaaqgers hstagylvet spglspdkae
      241 trknldmprl setsikdrla kyqaavskqg sssgiipmse iqaseselkn ykseqkenma
      301 pvedssscqd gekvsvgens lslhsglled ghagqsesea eaqkpvspkq qnlgakaagq
      361 seasppkavk kfqlpmketc vgcqktvypm erlfanqqvf hiscfrcsyc nsklslgtya
      421 slrgniyckp hfnqlfkskg nydegfghkq hkelwagkte ceefpektvh gvnspdtpqs
      481 pgvedapiak vgvlaasmea kasavperee rpaetkklri awpppsdqsi qgsaldegik
      541 vlkpkwppee eiskpdvqed vdldlkklrr ssslkersrp ftvaasfrti svkghkpens
      601 pspskeerdt lkrseelere vviekkqkek kvehrniqna geknveeege lsgiktaeqn
      661 ivengqmnad tdeeehatee peipkeelle pnspkhssla nvvtakessp nqnrksqdvg
      721 fwegedmedl sveeqikrnr yyedddde
//
LOCUS       XP_041324163             723 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain and actin-binding protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324163
VERSION     XP_041324163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468229.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..723
                     /product="LIM domain and actin-binding protein 1 isoform
                     X4"
                     /calculated_mol_wt=79802
     Region          79..>238
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          355..407
                     /region_name="LIM_Eplin_alpha_beta"
                     /note="The Lim domain of Epithelial Protein Lost in
                     Neoplasm (Eplin); cd09485"
                     /db_xref="CDD:188869"
     Site            order(355,358,376,379,382,385,403,406)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188869"
     CDS             1..723
                     /gene="LIMA1"
                     /coded_by="XM_041468229.1:142..2313"
                     /db_xref="GeneID:121353974"
ORIGIN      
        1 mepspfnrrq wtsqslkita kelslvnknk ssalaerfsk yqkaaeeata ekkrsntenl
       61 pahftrgnls vlkkkwenpa lgaepgkeav rsscaevrhk vgtgrspsps pgagaapgrp
      121 qcpagdstep hsrsreggsm encvreprem ekpegserse spgriekynv pltklkmmfe
      181 kgeapqpkaa dgrlcpqqgp reprraavgr risenslsle dcdaaqgers hstagylvet
      241 spglspdkae trknldmprl setsikdrla kyqaavskqg sssgiipmvs vgenslslhs
      301 glledghagq seseaeaqkp vspkqqnlga kaagqseasp pkavkkfqlp mketcvgcqk
      361 tvypmerlfa nqqvfhiscf rcsycnskls lgtyaslrgn iyckphfnql fkskgnydeg
      421 fghkqhkelw agkteceefp ektvhgvnsp dtpqspgved apiakvgvla asmeakasav
      481 pereerpaet kklriawppp sdqsiqgsal degikvlkpk wppeeeiskp dvqedvdldl
      541 kklrrssslk ersrpftvaa sfrtisvkgh kpenspspsk eerdtlkrse elerevviek
      601 kqkekkvehr niqnageknv eeegelsgik taeqniveng qmnadtdeee hateepeipk
      661 eellepnspk hsslanvvta kesspnqnrk sqdvgfwege dmedlsveeq ikrnryyedd
      721 dde
//
LOCUS       XP_041324164             619 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM domain and actin-binding protein 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324164
VERSION     XP_041324164.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468230.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="LIM domain and actin-binding protein 1 isoform
                     X5"
                     /calculated_mol_wt=68756
     Region          251..303
                     /region_name="LIM_Eplin_alpha_beta"
                     /note="The Lim domain of Epithelial Protein Lost in
                     Neoplasm (Eplin); cd09485"
                     /db_xref="CDD:188869"
     Site            order(251,254,272,275,278,281,299,302)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188869"
     CDS             1..619
                     /gene="LIMA1"
                     /coded_by="XM_041468230.1:251..2110"
                     /db_xref="GeneID:121353974"
ORIGIN      
        1 mencvrepre mekpegsers espgriekyn vpltklkmmf ekgeapqpka adgrlcpqqg
       61 preprraavg rrisenslsl edcdaaqger shstagylve tspglspdka etrknldmpr
      121 lsetsikdrl akyqaavskq gsssgiipms eiqaseselk nykseqkenm apvedssscq
      181 dgekvsvgen slslhsglle dghagqsese aeaqkpvspk qqnlgakaag qseasppkav
      241 kkfqlpmket cvgcqktvyp merlfanqqv fhiscfrcsy cnsklslgty aslrgniyck
      301 phfnqlfksk gnydegfghk qhkelwagkt eceefpektv hgvnspdtpq spgvedapia
      361 kvgvlaasme akasavpere erpaetkklr iawpppsdqs iqgsaldegi kvlkpkwppe
      421 eeiskpdvqe dvdldlkklr rssslkersr pftvaasfrt isvkghkpen spspskeerd
      481 tlkrseeler evviekkqke kkvehrniqn ageknveeeg elsgiktaeq nivengqmna
      541 dtdeeehate epeipkeell epnspkhssl anvvtakess pnqnrksqdv gfwegedmed
      601 lsveeqikrn ryyedddde
//
LOCUS       XP_041324166             128 aa            linear   VRT 06-MAY-2021
DEFINITION  gametocyte-specific factor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324166
VERSION     XP_041324166.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468232.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..128
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..128
                     /product="gametocyte-specific factor 1 isoform X1"
                     /calculated_mol_wt=14334
     Region          6..30
                     /region_name="zf-U11-48K"
                     /note="U11-48K-like CHHC zinc finger; pfam05253"
                     /db_xref="CDD:461603"
     Region          40..64
                     /region_name="zf-U11-48K"
                     /note="U11-48K-like CHHC zinc finger; pfam05253"
                     /db_xref="CDD:461603"
     CDS             1..128
                     /gene="GTSF1"
                     /coded_by="XM_041468232.1:467..853"
                     /db_xref="GeneID:121353975"
ORIGIN      
        1 mepdalvqcp ydrshqvrvs rlpyhlvrcq qnnpqvsrtl atcpfnarhr vprallrghv
       61 tscpdklple lppdpedkar tgggppqawq pppcqedwda elseleleep ppfilhvtkg
      121 dlpvpclr
//
LOCUS       XP_041324167             112 aa            linear   VRT 06-MAY-2021
DEFINITION  gametocyte-specific factor 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324167
VERSION     XP_041324167.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468233.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..112
                     /product="gametocyte-specific factor 1 isoform X2"
                     /calculated_mol_wt=12324
     Region          6..30
                     /region_name="zf-U11-48K"
                     /note="U11-48K-like CHHC zinc finger; pfam05253"
                     /db_xref="CDD:461603"
     Region          40..64
                     /region_name="zf-U11-48K"
                     /note="U11-48K-like CHHC zinc finger; pfam05253"
                     /db_xref="CDD:461603"
     CDS             1..112
                     /gene="GTSF1"
                     /coded_by="XM_041468233.1:468..806"
                     /db_xref="GeneID:121353975"
ORIGIN      
        1 mepdalvqcp ydrshqvrvs rlpyhlvrcq qnnpqvsrtl atcpfnarhr vprallrghv
       61 tscpdklple lppgvprcaq vptqtprtrp gqagdpprpg spprarrtgt qs
//
LOCUS       XP_041324168             327 aa            linear   VRT 06-MAY-2021
DEFINITION  neurogenic differentiation factor 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324168
VERSION     XP_041324168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468234.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="neurogenic differentiation factor 4"
                     /calculated_mol_wt=35885
     Region          58..144
                     /region_name="bHLH_TS_NeuroD4_ATOH3"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     neurogenic differentiation factor 4 (NeuroD4) and similar
                     proteins; cd19721"
                     /db_xref="CDD:381564"
     Site            order(92,95..96,98,100,103,123..124)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381564"
     Site            order(102,105..106,108..109,112..113,124..125,128,132,
                     134..135,138..139,141..142)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381564"
     Region          145..259
                     /region_name="Neuro_bHLH"
                     /note="Neuronal helix-loop-helix transcription factor;
                     pfam12533"
                     /db_xref="CDD:463621"
     CDS             1..327
                     /gene="NEUROD4"
                     /coded_by="XM_041468234.1:1..984"
                     /db_xref="GeneID:121353976"
ORIGIN      
        1 mpqsctkpsd maelvssqaw mgdvpaakae lkegdtrsap falvpaleeh dsveeeeeee
       61 edsekpkrrg pkkkkmtkar lerfrarrvk anarertrmh glndaldnlr rvmpcysktq
      121 klskietlrl arnyiwalse vletgqtpeg ksfvemlckg lsqptsnlva gclqlgaqpl
      181 flekheekpc eaalpghsfg yqglpsppyg smeshllhlk ppafkslvea sfgshpsdcs
      241 tppyegpltp plsisgnfsl kqdgspelek syppfmahyp svslagahgh gshfqgsvpr
      301 yeipldvafe sfpphvagpq lgaifne
//
LOCUS       XP_041324169             547 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent 3',5'-cyclic nucleotide
            phosphodiesterase 1B [Pyrgilauda ruficollis].
ACCESSION   XP_041324169
VERSION     XP_041324169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..547
                     /product="calcium/calmodulin-dependent 3',5'-cyclic
                     nucleotide phosphodiesterase 1B"
                     /calculated_mol_wt=61117
     Region          83..144
                     /region_name="PDEase_I_N"
                     /note="3'5'-cyclic nucleotide phosphodiesterase
                     N-terminal; pfam08499"
                     /db_xref="CDD:462497"
     Region          229..450
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..547
                     /gene="PDE1B"
                     /coded_by="XM_041468235.1:1..1644"
                     /db_xref="GeneID:121353977"
ORIGIN      
        1 mepprslpgl erergaldaa ggcpspldak avpgrkvwvk lrallrflvk qleagevsve
       61 elkrnleyaa slleavcide trqvldtede lrdmgsdaav psevrdwlaa tftqqarakg
      121 rraeekpkfr sivhavqagi fvermfrrty tavgpsysss vlnclkgldq wcfdvfslhr
      181 aaeehslrtv vfelftrhnl nsrfkipgaf ltsllealeg gygkfrnpyh nqvhaadvtq
      241 tvhcfllrtg mlhclseiel laivfaaaih dfehtgttns fhiqtksdta ilyndrsvle
      301 nhhisavfrl mqdeelnifv nltkdefael ralviemvla tdmschfqqv ksmktalqql
      361 erldkskvls lllhaadish ptkqwavhsr wtkalmeeff rqgdkeaelg lpfsplcdrt
      421 stlvaqsqig fidfiveptf svltdvaekl vtplaedgsk akgnpaatqq pssqwrqpsl
      481 dehlevgdik adlagfrstw tkhiqenkqk wkeraasgit nqasidelsp ceepaatgth
      541 sengdve
//
LOCUS       XP_041324170             547 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium/calmodulin-dependent 3',5'-cyclic nucleotide
            phosphodiesterase 1B [Pyrgilauda ruficollis].
ACCESSION   XP_041324170
VERSION     XP_041324170.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468236.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..547
                     /product="calcium/calmodulin-dependent 3',5'-cyclic
                     nucleotide phosphodiesterase 1B"
                     /calculated_mol_wt=61117
     Region          83..144
                     /region_name="PDEase_I_N"
                     /note="3'5'-cyclic nucleotide phosphodiesterase
                     N-terminal; pfam08499"
                     /db_xref="CDD:462497"
     Region          229..450
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..547
                     /gene="PDE1B"
                     /coded_by="XM_041468236.1:1..1644"
                     /db_xref="GeneID:121353977"
ORIGIN      
        1 mepprslpgl erergaldaa ggcpspldak avpgrkvwvk lrallrflvk qleagevsve
       61 elkrnleyaa slleavcide trqvldtede lrdmgsdaav psevrdwlaa tftqqarakg
      121 rraeekpkfr sivhavqagi fvermfrrty tavgpsysss vlnclkgldq wcfdvfslhr
      181 aaeehslrtv vfelftrhnl nsrfkipgaf ltsllealeg gygkfrnpyh nqvhaadvtq
      241 tvhcfllrtg mlhclseiel laivfaaaih dfehtgttns fhiqtksdta ilyndrsvle
      301 nhhisavfrl mqdeelnifv nltkdefael ralviemvla tdmschfqqv ksmktalqql
      361 erldkskvls lllhaadish ptkqwavhsr wtkalmeeff rqgdkeaelg lpfsplcdrt
      421 stlvaqsqig fidfiveptf svltdvaekl vtplaedgsk akgnpaatqq pssqwrqpsl
      481 dehlevgdik adlagfrstw tkhiqenkqk wkeraasgit nqasidelsp ceepaatgth
      541 sengdve
//
LOCUS       XP_041324171            1085 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: nck-associated protein 1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324171
VERSION     XP_041324171.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468237.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1085
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1085
                     /product="LOW QUALITY PROTEIN: nck-associated protein
                     1-like"
                     /calculated_mol_wt=120457
     Region          11..1076
                     /region_name="Nckap1"
                     /note="Nck-associated protein 1; pfam09735"
                     /db_xref="CDD:462866"
     CDS             1..1085
                     /gene="NCKAP1L"
                     /coded_by="XM_041468237.1:38..3295"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:121353978"
ORIGIN      
        1 mslpsvygdk laekltllne rgrgvlvrvy nlkkqhlgpv hrdrgdivra lapfyqtfld
       61 vlefrdhvye llntidasqc ffdihinydf tkgyldlvvt yvslvlllar aeerrlllgl
      121 yhcahemshg asepgfarla qmvleyehpl kklpeefgph tkavsgalls lrapfarrcr
      181 daelwrqeql lsllgpagdm lspatsdgma ceylslevme rwiilgflvc pgalatppcq
      241 elwrqalrgs lfvtlvrdea iavhkvteel lgglkgxdgd taeixrgfge ilgefreilg
      301 gfwevlggiw eilggpdpls ppqallvfva lslcrdevsw lsrhaehvtk sknpedfsds
      361 rvaellflle qlralvrrhl rllrryhrqy larfdalvls dviqnlsvcp eeesvilssf
      421 vsslsalsak evddqeqfdf talrldwfrl qaytsvakaa lplasngdvg ramslvvfht
      481 rlldrpeell detsdlshlc fhprplermf avtldepsml rfaiafpllc ahfsrclhpm
      541 cpeeypqlea aalglchkfl eelarvgsgc vldacaeqhn lsqqllpkhc aatisrarvk
      601 ktpkqpprkg dpqrdkpgte sqrrdrtltt nmdklhltla elslslnhvp nftvfghtvt
      661 paeylsshle trltraivam agysqatqev arpsevlagl vaymglvqrl gqlvaldtgr
      721 llravllqqs hprdatgqpt ltaiytdwyl eallrqastg avllspalqa fttvpreeqp
      781 pfsaaefsdi semralaeli gpygmrflse nlmwhvgsqv telkklvaen mdtlvqlrcc
      841 raeqrpallp rlssaenvlk rmtiigeils framaqqglr evfsqhcpfl mgpiecladv
      901 vtpdtdiqvt lsifelasaa gvpcevdpal vtalaghrte gsspeedykv sclllvfvav
      961 slpllaadpa slynpeldgh nnnlhclaka ivqlsaalft vhskniethl keflllasss
     1021 llqlaqepdk ararnqdsiv lllhlivaes sfltldmles cfpyvllrna frqvcrdppg
     1081 rapph
//
LOCUS       XP_041324172             147 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1 regulatory subunit 1A-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324172
VERSION     XP_041324172.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468238.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="protein phosphatase 1 regulatory subunit
                     1A-like"
                     /calculated_mol_wt=15300
     Region          2..>30
                     /region_name="DARPP-32"
                     /note="Protein phosphatase inhibitor 1/DARPP-32;
                     pfam05395"
                     /db_xref="CDD:428454"
     CDS             1..147
                     /gene="LOC121353979"
                     /coded_by="XM_041468238.1:1..444"
                     /db_xref="GeneID:121353979"
ORIGIN      
        1 mepnsprkiq ftvpllephl dpeaaeqaar liresslgna aggalsywvs gergrgvsav
       61 ptatavpiai avptatsvpt aatnprkrqr rgrsgsgcdl gqgqrpqrkg rapplspcrc
      121 phaavptrfp rpdpeappdp gqpgpeq
//
LOCUS       XP_041324174             364 aa            linear   VRT 06-MAY-2021
DEFINITION  decreased expression in renal and prostate cancer protein-like,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324174
VERSION     XP_041324174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468240.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..364
                     /product="decreased expression in renal and prostate
                     cancer protein-like"
     Region          34..>284
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          185..308
                     /region_name="LbR-like"
                     /note="Left-handed beta-roll, including virulence factors
                     and various other proteins; cl17507"
                     /db_xref="CDD:248061"
     Site            order(199,201,203..205,213,215,217..219,235,237,239..241,
                     249,251,253,255,263,265,267,269,277,279,281..283,291,293)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:240612"
     CDS             1..364
                     /gene="LOC121353980"
                     /coded_by="XM_041468240.1:<1..1095"
                     /db_xref="GeneID:121353980"
ORIGIN      
        1 spprdgggrv raggcdhpcp aptrgsgtap appqvtapgp rrgatavpls pgcrcpragr
       61 ppgpsacqgg tgksqrinsp gaspwraarp giirdyprgp sgtgagttsq ipgqnsispg
      121 pnpkswgeds ippgmnpksr gensispglh pksrgqnsip qglnpksrgq nsippglnpk
      181 srgqnsiplg pnpksrgens ipqglnpksw eqnsippgln nsispgpnpk swgedsippg
      241 mnpksrgens ispglhpksr gqnsiplgln pksrgedsip lglnpksrge dsiplglnpk
      301 srgensispg lhpksrgqns ipqglnpktq nlsqdtslkp pslgaavnqs fqsinqsinp
      361 qnsa
//
LOCUS       XP_041324175             331 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(U)-specific endoribonuclease [Pyrgilauda ruficollis].
ACCESSION   XP_041324175
VERSION     XP_041324175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468241.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="poly(U)-specific endoribonuclease"
                     /calculated_mol_wt=37755
     Region          62..327
                     /region_name="XendoU"
                     /note="Endoribonuclease XendoU; pfam09412"
                     /db_xref="CDD:462792"
     CDS             1..331
                     /gene="ENDOU"
                     /coded_by="XM_041468241.1:1..996"
                     /db_xref="GeneID:121353981"
ORIGIN      
        1 mslsspgcrp hgldvavitw vspdrmsrir icpgatfhpg wasprclryg fssssdsitd
       61 rellqlseql ygldhnkarp sdvainpqhl agpdetgdkq drspqplyky vneelfskpt
      121 yasfiklldn yqratgreee vtteelreqe rfleevmkte lmkklfvflq gknrysseqe
      181 flqdlkqmwf glysrgdger dssgfehvfs gevkkgkvsg fhnwirfyll ekqgvvnyfs
      241 hnfngpwdty pdvlglqfsw dgfykevgsa figcspefef glyslcflar pgrachlslg
      301 ghrlsvqtyp wtkstygsgr rfiatayvms p
//
LOCUS       XP_041324176            1000 aa            linear   VRT 06-MAY-2021
DEFINITION  histone deacetylase 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324176
VERSION     XP_041324176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468242.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1000
                     /product="histone deacetylase 7"
                     /calculated_mol_wt=107746
     Region          <120..545
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          558..>855
                     /region_name="Arginase_HDAC"
                     /note="Arginase-like and histone-like hydrolases; cl17011"
                     /db_xref="CDD:450134"
     Site            order(710,747,749,751,835,837)
                     /site_type="active"
                     /db_xref="CDD:212513"
     Site            order(747,749,837)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:212513"
     CDS             1..1000
                     /gene="HDAC7"
                     /coded_by="XM_041468242.1:205..3207"
                     /db_xref="GeneID:121353982"
ORIGIN      
        1 mpsvaavtpc tsprvpqavp mdlrigqrvv kpqdtallal kqqqlqhqlf laslhqqqve
       61 qlahqhvrva mesphreaep gqqeqelrqi lnkdkskrsa vastvvkqkl aevilkkqqa
      121 alertsnppa aalpyrslep lepegpspam lstflspvps aaldtpehfp lrktvsepnl
      181 kvrckprkcl drrknpltrk esappslkrr ppdaidssps ssstpvsgcs spndslpaeh
      241 aalpaapgva heaplaqrll lqesslaqfa lqsaaslpai tlglpattgt radaerralp
      301 glahrvpvln gpvlpgahpp vfipagleqr epgsplsprl qpviilepsv thaplvavpg
      361 lgavplplvp aerlalpgqh kplgrtrsep lppspsaaqq hllfqqhfle rlrqqthlgk
      421 rmakssekpr lrqipssedm eaegtlpegt lpegdpsrar lepprpgssg kepertqkmg
      481 qppeelvlqq aflwdsfqrv qqqllkrqpl adppvlppgh rplsraqssp atatvslpaq
      541 dtkalalpvq eqppkphftt glvydsvmlk hqcscgdnsn hpehagriqs iwsrlqergl
      601 rsrceclrgr katleelqcv hserhvllyg tnplnrlkld ngklagilsq rtfvmlpcgg
      661 vgvdsdtiwn elhssnaarw aagsvtelaf kvatrelkng favvrppghh adpstamgfc
      721 ffnsvaiaar qlqqkgklsk ilivdwdvhh gngtqqifyr dpevlyislh rhddgnffpg
      781 sgaadevggd pgdrgdsraq egtaghsrvq rgtagtvvmp iahefcpdvv lvsagfdaae
      841 ghppplggyk vsakckevar ggvsplgwgv ppwgqgpgtp lslsipvlvy pcpglslswa
      901 ipvlgypcpg lslswavpgc pcprpapvlv spaplspptg rywvavqrfa sklgcsflea
      961 qhheadevet vtalaslsva vmvekraqee pmeqeepmnq
//
LOCUS       XP_041324177             502 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon-induced protein with tetratricopeptide repeats 2-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324177
VERSION     XP_041324177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468243.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="interferon-induced protein with
                     tetratricopeptide repeats 2-like"
                     /calculated_mol_wt=57441
     Region          <142..391
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          177..205
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(178,181..182,185..186,188,212,215..216,219..220,
                     222..223,253,256..257,260..261,263)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          210..247
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..502
                     /gene="LOC121353983"
                     /coded_by="XM_041468243.1:1..1509"
                     /db_xref="GeneID:121353983"
ORIGIN      
        1 mtaaltrrsr sqwegklcfl dlllaggsaa kpsslgsdmm pagtmskeql kkkldalqch
       61 ftwslgvdsf slchllqkld veikhtaqqn qvallglqay lhqlnnhske alqslkaaee
      121 hndkkhlwts tagsltiygn yawihylqgs yqeaetwler vqplcstpwd vgliphiqaq
      181 kgwsllaira rngerarecf nmalmlepen ksfrtglama lysswnfswq pdiereakih
      241 lerivdeqpe nyrakiylak llkqgdreka tglvkecaen ssdpevlkls vlfwlplstq
      301 kaseiiqqal qqdpgyhlly qalancykqq wveanqkvkn kirckaikel qqivqehpdl
      361 dltfvklqla eflgiktpsq eekiyeelqr qistlslrcq qalnlswgdf flyrekctag
      421 akakfmecyk ipvqtdqrre cghrllkmae tyqrngdtda anhihlflqe ankhlprepa
      481 vlclddedhp splriwhdfs qg
//
LOCUS       XP_041324178             316 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protease serine 12 [Pyrgilauda ruficollis].
ACCESSION   XP_041324178
VERSION     XP_041324178.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468244.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="transmembrane protease serine 12"
                     /calculated_mol_wt=34337
     Region          46..284
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            46
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(91,140,238)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(232,259,261)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..316
                     /gene="TMPRSS12"
                     /coded_by="XM_041468244.1:1..951"
                     /db_xref="GeneID:121353984"
ORIGIN      
        1 mrrarpalpl lllllagplp wgaaptdpvd ecqqqlpvar svaswivggh eapegawpwl
       61 vslqvlrggv rfmhlcggvl lsrravltag hcvdgrtdpc swravlgvhn lqkhsphtar
      121 rrirriivhs afkretfend vavfelrsav ryslyiqplc lppaalvqpl enssdcyisg
      181 wgrttekgki spvlkeahvg ilppslcnss egyaglvnnk alcagswagg tdtcqgdsgg
      241 plmcyhpdnn kyyligiasf gvgcgrpryp giyvrlsqyg kwikaklllt nktrnpvstt
      301 ltilltlvht viaqil
//
LOCUS       XP_041324179             256 aa            linear   VRT 06-MAY-2021
DEFINITION  methyltransferase-like protein 7A [Pyrgilauda ruficollis].
ACCESSION   XP_041324179
VERSION     XP_041324179.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468245.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="methyltransferase-like protein 7A"
                     /calculated_mol_wt=28865
     Region          66..195
                     /region_name="UbiE"
                     /note="Ubiquinone/menaquinone biosynthesis C-methylase
                     UbiE/MenG [Coenzyme transport and metabolism]; COG2226"
                     /db_xref="CDD:441828"
     CDS             1..256
                     /gene="METTL7A"
                     /coded_by="XM_041468245.1:233..1003"
                     /db_xref="GeneID:121353985"
ORIGIN      
        1 mdplptlkma eaaasvlllr aglallawpi yllsflgiwe pfcrkvffpf ilekicglhe
       61 kkskkhkqel frnlpdfkgp sgelrlleig tgsganfqfy ppgckvtctd inpnfqegls
      121 rnmkknqhlh yeqflvaage dlrqvpsgsv davvctlvlc svhsvsstlr evlrvlrpgg
      181 afyflehvaa ehsswtyfwq qvcyptwklv fagccltrel wknleeakfs elkiqhisva
      241 lpwmpiephi vgygvk
//
LOCUS       XP_041324180             107 aa            linear   VRT 06-MAY-2021
DEFINITION  protransforming growth factor alpha, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324180
VERSION     XP_041324180.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468246.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520907.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>107
                     /product="protransforming growth factor alpha"
     Region          <10..47
                     /region_name="PHA02887"
                     /note="EGF-like protein; Provisional"
                     /db_xref="CDD:165214"
     CDS             1..107
                     /gene="TGFA"
                     /coded_by="XM_041468246.1:<1..>323"
                     /codon_start=3
                     /db_xref="GeneID:121353986"
ORIGIN      
        1 pvaaavrshf necpdshrqf cfhgtcrflv qeekpacvch sgyvgtratr gtchsgchsg
       61 ccrlrkrwpc pcpcpcpgwc repgagaekp ggllkggasc chsetgg
//
LOCUS       XP_041324182             176 aa            linear   VRT 06-MAY-2021
DEFINITION  glycogen phosphorylase, muscle form-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324182
VERSION     XP_041324182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468248.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520929.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 30% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..176
                     /product="glycogen phosphorylase, muscle form-like"
                     /calculated_mol_wt=19441
     Region          11..>149
                     /region_name="Phosphorylase"
                     /note="Carbohydrate phosphorylase; cl46672"
                     /db_xref="CDD:481012"
     CDS             1..176
                     /gene="LOC121353988"
                     /coded_by="XM_041468248.1:1..531"
                     /db_xref="GeneID:121353988"
ORIGIN      
        1 mqvshadhtc tqvvlalpyd tpvpgyrnnt vntlrlwsar apndfnlkdf fqregvrggl
       61 frgltgghpq ffegkelrlk qeyfvvaatl hdivrrfksa kfgsrdpvrk sfesfpdkva
      121 iqlndthpsl aipelmrilv deehlawdqv glggtsgppq ttggcpqnpr egstpg
//
LOCUS       XP_041324183             187 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribose glycohydrolase OARD1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324183
VERSION     XP_041324183.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468249.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..187
                     /product="ADP-ribose glycohydrolase OARD1"
                     /calculated_mol_wt=20443
     Region          48..178
                     /region_name="Macro_Poa1p-like"
                     /note="macrodomain, Poa1p-like family; cd02901"
                     /db_xref="CDD:394873"
     Site            order(54..57,67..70,74..80,82,118..119,153..160)
                     /site_type="other"
                     /note="ADP-ribose binding site [chemical binding]"
                     /db_xref="CDD:394873"
     CDS             1..187
                     /gene="OARD1"
                     /coded_by="XM_041468249.1:157..720"
                     /db_xref="GeneID:121353989"
ORIGIN      
        1 mwaalgrlgv aqavgparli avrpaaagaf siphvtmath fskdqeerir cvkgdlfscp
       61 gtdalahcis edcrmgagia vlfkkkfggv qelldqkkkt gevavlqrdd ryiyylitkq
      121 kvshkptyes mqksleamka hclnngvtdi smprigcgld glqwekvsai leevfentdi
      181 kitvysl
//
LOCUS       XP_041324184             336 aa            linear   VRT 06-MAY-2021
DEFINITION  C->U-editing enzyme APOBEC-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324184
VERSION     XP_041324184.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468250.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="C->U-editing enzyme APOBEC-2"
                     /calculated_mol_wt=38630
     Region          8..>102
                     /region_name="TspO_MBR"
                     /note="TspO/MBR family; pfam03073"
                     /db_xref="CDD:460795"
     Site            order(14..15,17..18,21,65,77,79..81,83..84,86..88,90..91,
                     94..95)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320706"
     Region          158..335
                     /region_name="NAD1"
                     /note="Novel AID APOBEC clade 1; pfam18778"
                     /db_xref="CDD:465865"
     CDS             1..336
                     /gene="APOBEC2"
                     /coded_by="XM_041468250.1:141..1151"
                     /db_xref="GeneID:121353990"
ORIGIN      
        1 mwaytvgftm lphvggflgw flsrkeipaw ydklkkpswc psrrvfpvaw tmlytgmgya
       61 sylvwndlgg csskaivplg lygaqlvlnw awpplffgah nlnmwpqlgp svlwrmaekq
      121 eepsnaqnge pdnaeegegk kkkvkredlp pfeivtgerl paiffkfqfr nveyssgrnk
      181 tflcyvvetq gkepvtsrgy ledehaaaha emaffntilp tcqagarhdv twyvssspcv
      241 tcaqriceal rknkglrlti mvgrlfmwee pemqaalrsm keagcklrim kpqdfeyvwk
      301 nfveqeegee aksfvpwedi qenfqyyeek laeilh
//
LOCUS       XP_041324185             303 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324185
VERSION     XP_041324185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X1"
                     /calculated_mol_wt=32062
     Region          219..274
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..303
                     /gene="NFYA"
                     /coded_by="XM_041468251.1:193..1104"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqqggv tavqlqteaq vasasgqqvq tlqvvqgqpl
       61 mvqvsggqli tstgqpimvq avpggqgqti mqvpvsgtqg lqqtqqqiav qgqqvaqaae
      121 gqtivyqpvn adgtilqqvt apvtgmitip aaslagaqiv qtgantntts sgqgtvtvtl
      181 pvagnvvnsg gmvmmvpgag svpaiqripl pgaemleeep lyvnakqyhr ilkrrqarak
      241 leaegkipke rrkylhesrh rhamarkrge ggrffspkek dsphmqdpsq sneeamtqmi
      301 rvs
//
LOCUS       XP_041324186             303 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324186
VERSION     XP_041324186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X1"
                     /calculated_mol_wt=32062
     Region          219..274
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..303
                     /gene="NFYA"
                     /coded_by="XM_041468252.1:1263..2174"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqqggv tavqlqteaq vasasgqqvq tlqvvqgqpl
       61 mvqvsggqli tstgqpimvq avpggqgqti mqvpvsgtqg lqqtqqqiav qgqqvaqaae
      121 gqtivyqpvn adgtilqqvt apvtgmitip aaslagaqiv qtgantntts sgqgtvtvtl
      181 pvagnvvnsg gmvmmvpgag svpaiqripl pgaemleeep lyvnakqyhr ilkrrqarak
      241 leaegkipke rrkylhesrh rhamarkrge ggrffspkek dsphmqdpsq sneeamtqmi
      301 rvs
//
LOCUS       XP_041324187             302 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324187
VERSION     XP_041324187.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468253.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X2"
                     /calculated_mol_wt=31934
     Region          218..273
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..302
                     /gene="NFYA"
                     /coded_by="XM_041468253.1:193..1101"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqggvt avqlqteaqv asasgqqvqt lqvvqgqplm
       61 vqvsggqlit stgqpimvqa vpggqgqtim qvpvsgtqgl qqtqqqiavq gqqvaqaaeg
      121 qtivyqpvna dgtilqqvta pvtgmitipa aslagaqivq tgantnttss gqgtvtvtlp
      181 vagnvvnsgg mvmmvpgags vpaiqriplp gaemleeepl yvnakqyhri lkrrqarakl
      241 eaegkipker rkylhesrhr hamarkrgeg grffspkekd sphmqdpsqs neeamtqmir
      301 vs
//
LOCUS       XP_041324188             302 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324188
VERSION     XP_041324188.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468254.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X3"
                     /calculated_mol_wt=31963
     Region          218..273
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..302
                     /gene="NFYA"
                     /coded_by="XM_041468254.1:193..1101"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqqggv tavqlqteaq vasasgqqvq tlqvqgqplm
       61 vqvsggqlit stgqpimvqa vpggqgqtim qvpvsgtqgl qqtqqqiavq gqqvaqaaeg
      121 qtivyqpvna dgtilqqvta pvtgmitipa aslagaqivq tgantnttss gqgtvtvtlp
      181 vagnvvnsgg mvmmvpgags vpaiqriplp gaemleeepl yvnakqyhri lkrrqarakl
      241 eaegkipker rkylhesrhr hamarkrgeg grffspkekd sphmqdpsqs neeamtqmir
      301 vs
//
LOCUS       XP_041324190             302 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324190
VERSION     XP_041324190.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468256.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X2"
                     /calculated_mol_wt=31934
     Region          218..273
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..302
                     /gene="NFYA"
                     /coded_by="XM_041468256.1:1263..2171"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqggvt avqlqteaqv asasgqqvqt lqvvqgqplm
       61 vqvsggqlit stgqpimvqa vpggqgqtim qvpvsgtqgl qqtqqqiavq gqqvaqaaeg
      121 qtivyqpvna dgtilqqvta pvtgmitipa aslagaqivq tgantnttss gqgtvtvtlp
      181 vagnvvnsgg mvmmvpgags vpaiqriplp gaemleeepl yvnakqyhri lkrrqarakl
      241 eaegkipker rkylhesrhr hamarkrgeg grffspkekd sphmqdpsqs neeamtqmir
      301 vs
//
LOCUS       XP_041324191             301 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324191
VERSION     XP_041324191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X4"
                     /calculated_mol_wt=31835
     Region          217..272
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..301
                     /gene="NFYA"
                     /coded_by="XM_041468257.1:193..1098"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqggvt avqlqteaqv asasgqqvqt lqvqgqplmv
       61 qvsggqlits tgqpimvqav pggqgqtimq vpvsgtqglq qtqqqiavqg qqvaqaaegq
      121 tivyqpvnad gtilqqvtap vtgmitipaa slagaqivqt gantnttssg qgtvtvtlpv
      181 agnvvnsggm vmmvpgagsv paiqriplpg aemleeeply vnakqyhril krrqarakle
      241 aegkipkerr kylhesrhrh amarkrgegg rffspkekds phmqdpsqsn eeamtqmirv
      301 s
//
LOCUS       XP_041324192             297 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324192
VERSION     XP_041324192.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468258.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..297
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X5"
                     /calculated_mol_wt=31494
     Region          213..268
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..297
                     /gene="NFYA"
                     /coded_by="XM_041468258.1:193..1086"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqqggv tavqlqteaq vasasgqqvq tlqvvqgqpl
       61 mvqvsggqli tstgqpimvq avpggqgqti mqvpvsgtqg lqqtqqqiav qgqqvaqaae
      121 gqtivyqpvn adgtilqqgm itipaaslag aqivqtgant nttssgqgtv tvtlpvagnv
      181 vnsggmvmmv pgagsvpaiq riplpgaeml eeeplyvnak qyhrilkrrq arakleaegk
      241 ipkerrkylh esrhrhamar krgeggrffs pkekdsphmq dpsqsneeam tqmirvs
//
LOCUS       XP_041324193             274 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324193
VERSION     XP_041324193.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468259.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X6"
                     /calculated_mol_wt=29125
     Region          190..245
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..274
                     /gene="NFYA"
                     /coded_by="XM_041468259.1:193..1017"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqvqgqp lmvqvsggql itstgqpimv qavpggqgqt
       61 imqvpvsgtq glqqtqqqia vqgqqvaqaa egqtivyqpv nadgtilqqv tapvtgmiti
      121 paaslagaqi vqtgantntt ssgqgtvtvt lpvagnvvns ggmvmmvpga gsvpaiqrip
      181 lpgaemleee plyvnakqyh rilkrrqara kleaegkipk errkylhesr hrhamarkrg
      241 eggrffspke kdsphmqdps qsneeamtqm irvs
//
LOCUS       XP_041324194             347 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear transcription factor Y subunit alpha isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324194
VERSION     XP_041324194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="nuclear transcription factor Y subunit alpha
                     isoform X7"
                     /calculated_mol_wt=36712
     Region          263..318
                     /region_name="CBFB_NFYA"
                     /note="CCAAT-binding transcription factor (CBF-B/NF-YA)
                     subunit B; pfam02045"
                     /db_xref="CDD:396572"
     CDS             1..347
                     /gene="NFYA"
                     /coded_by="XM_041468260.1:193..1236"
                     /db_xref="GeneID:121353991"
ORIGIN      
        1 meqytansss steqivvqag qiqqqqqggv tavqlqteaq vasasgqqvq tlqvvqgqpl
       61 mvqvsggqli tstgqpimvq avpggqgqti mqvpvsgtqg lqqiqlvqpg qiqiqggqav
      121 qvqgqqgqtq qiiiqqpqta vtagqtqtqq qiavqgqqva qaaegqtivy qpvnadgtil
      181 qqvtapvtgm itipaaslag aqivqtgant nttssgqgtv tvtlpvagnv vnsggmvmmv
      241 pgagsvpaiq riplpgaeml eeeplyvnak qyhrilkrrq arakleaegk ipkerrkylh
      301 esrhrhamar krgeggrffs pkekdsphmq dpsqsneeam tqmirvs
//
LOCUS       XP_041324195             570 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324195
VERSION     XP_041324195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..570
                     /product="forkhead box protein P4 isoform X1"
                     /calculated_mol_wt=63606
     Region          195..262
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          303..>525
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          359..445
                     /region_name="FH_FOXP4"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P4 (FOXP4) and similar proteins; cd20067"
                     /db_xref="CDD:410841"
     Site            order(363..364,382..383,386,400,402,405,408..409,412,419,
                     426,428)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410841"
     CDS             1..570
                     /gene="FOXP4"
                     /coded_by="XM_041468261.1:69..1781"
                     /db_xref="GeneID:121353992"
ORIGIN      
        1 mmspqmitpq qmqqilsppq lqallqqqqa imlqqlqeyy kkqqeqlhlq lltqqqagkq
       61 qpkeqplgnk qlafqqqllq mqqlqqqhll nlqrqglvsl ppgqgtvplq tlpqavcpsd
      121 lqqlwkevta tqpvedsikq egldlttnts nstsfsaakv sppishhplp ngqstmhtpr
      181 rdsssheetp gshplyghge ckwpgcetlc edlgqfvkhl ntehalddrs taqcrvqmqv
      241 vqqleiqlak eserlqamma hlhmrpsepk pfsqpvslnl vssatlskst sdtfpdglph
      301 pptsatapit plrqgpsvis sstlhsvgpi rrrnsekfct pisselaqnh efyknadvrp
      361 pftyaslirq ailetpdrql tlneiynwft rmfayfrrnt atwknavrhn lslhkcfvrv
      421 envkgavwtv deheyqkrrp pkmtgsptlv knmisglgyg alnasyqaal aessfpllns
      481 ptmintssas amlhvghddv sstveqvnsn gsnsprlspq qyshpvhvke epaeaeddsr
      541 pvslmastnq nvtipddrdl eeelpvedls
//
LOCUS       XP_041324196             569 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324196
VERSION     XP_041324196.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468262.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="forkhead box protein P4 isoform X2"
                     /calculated_mol_wt=63478
     Region          194..261
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          302..>524
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          358..444
                     /region_name="FH_FOXP4"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P4 (FOXP4) and similar proteins; cd20067"
                     /db_xref="CDD:410841"
     Site            order(362..363,381..382,385,399,401,404,407..408,411,418,
                     425,427)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410841"
     CDS             1..569
                     /gene="FOXP4"
                     /coded_by="XM_041468262.1:69..1778"
                     /db_xref="GeneID:121353992"
ORIGIN      
        1 mmspqmitpq qmqqilsppq lqallqqqqa imlqqlqeyy kkqqeqlhlq lltqqqagkq
       61 qpkeplgnkq lafqqqllqm qqlqqqhlln lqrqglvslp pgqgtvplqt lpqavcpsdl
      121 qqlwkevtat qpvedsikqe gldlttntsn stsfsaakvs ppishhplpn gqstmhtprr
      181 dsssheetpg shplyghgec kwpgcetlce dlgqfvkhln tehalddrst aqcrvqmqvv
      241 qqleiqlake serlqammah lhmrpsepkp fsqpvslnlv ssatlsksts dtfpdglphp
      301 ptsatapitp lrqgpsviss stlhsvgpir rrnsekfctp isselaqnhe fyknadvrpp
      361 ftyaslirqa iletpdrqlt lneiynwftr mfayfrrnta twknavrhnl slhkcfvrve
      421 nvkgavwtvd eheyqkrrpp kmtgsptlvk nmisglgyga lnasyqaala essfpllnsp
      481 tmintssasa mlhvghddvs stveqvnsng snsprlspqq yshpvhvkee paeaeddsrp
      541 vslmastnqn vtipddrdle eelpvedls
//
LOCUS       XP_041324197             568 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324197
VERSION     XP_041324197.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468263.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="forkhead box protein P4 isoform X3"
                     /calculated_mol_wt=63420
     Region          195..262
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          262..>523
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          357..443
                     /region_name="FH_FOXP4"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P4 (FOXP4) and similar proteins; cd20067"
                     /db_xref="CDD:410841"
     Site            order(361..362,380..381,384,398,400,403,406..407,410,417,
                     424,426)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410841"
     CDS             1..568
                     /gene="FOXP4"
                     /coded_by="XM_041468263.1:69..1775"
                     /db_xref="GeneID:121353992"
ORIGIN      
        1 mmspqmitpq qmqqilsppq lqallqqqqa imlqqlqeyy kkqqeqlhlq lltqqqagkq
       61 qpkeqplgnk qlafqqqllq mqqlqqqhll nlqrqglvsl ppgqgtvplq tlpqavcpsd
      121 lqqlwkevta tqpvedsikq egldlttnts nstsfsaakv sppishhplp ngqstmhtpr
      181 rdsssheetp gshplyghge ckwpgcetlc edlgqfvkhl ntehalddrs taqcrvqmqv
      241 vqqleiqlak eserlqamma hlhmrpsepk pfsqplnlvs satlskstsd tfpdglphpp
      301 tsatapitpl rqgpsvisss tlhsvgpirr rnsekfctpi sselaqnhef yknadvrppf
      361 tyaslirqai letpdrqltl neiynwftrm fayfrrntat wknavrhnls lhkcfvrven
      421 vkgavwtvde heyqkrrppk mtgsptlvkn misglgygal nasyqaalae ssfpllnspt
      481 mintssasam lhvghddvss tveqvnsngs nsprlspqqy shpvhvkeep aeaeddsrpv
      541 slmastnqnv tipddrdlee elpvedls
//
LOCUS       XP_041324198             567 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324198
VERSION     XP_041324198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="forkhead box protein P4 isoform X4"
                     /calculated_mol_wt=63292
     Region          194..261
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          261..>522
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          356..442
                     /region_name="FH_FOXP4"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P4 (FOXP4) and similar proteins; cd20067"
                     /db_xref="CDD:410841"
     Site            order(360..361,379..380,383,397,399,402,405..406,409,416,
                     423,425)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410841"
     CDS             1..567
                     /gene="FOXP4"
                     /coded_by="XM_041468264.1:69..1772"
                     /db_xref="GeneID:121353992"
ORIGIN      
        1 mmspqmitpq qmqqilsppq lqallqqqqa imlqqlqeyy kkqqeqlhlq lltqqqagkq
       61 qpkeplgnkq lafqqqllqm qqlqqqhlln lqrqglvslp pgqgtvplqt lpqavcpsdl
      121 qqlwkevtat qpvedsikqe gldlttntsn stsfsaakvs ppishhplpn gqstmhtprr
      181 dsssheetpg shplyghgec kwpgcetlce dlgqfvkhln tehalddrst aqcrvqmqvv
      241 qqleiqlake serlqammah lhmrpsepkp fsqplnlvss atlskstsdt fpdglphppt
      301 satapitplr qgpsvissst lhsvgpirrr nsekfctpis selaqnhefy knadvrppft
      361 yaslirqail etpdrqltln eiynwftrmf ayfrrntatw knavrhnlsl hkcfvrvenv
      421 kgavwtvdeh eyqkrrppkm tgsptlvknm isglgygaln asyqaalaes sfpllnsptm
      481 intssasaml hvghddvsst veqvnsngsn sprlspqqys hpvhvkeepa eaeddsrpvs
      541 lmastnqnvt ipddrdleee lpvedls
//
LOCUS       XP_041324199             671 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein P4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324199
VERSION     XP_041324199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468265.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..671
                     /product="forkhead box protein P4 isoform X5"
                     /calculated_mol_wt=73551
     Region          296..363
                     /region_name="FOXP-CC"
                     /note="FOXP coiled-coil domain; pfam16159"
                     /db_xref="CDD:465036"
     Region          404..>626
                     /region_name="COG5025"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]"
                     /db_xref="CDD:227358"
     Region          460..546
                     /region_name="FH_FOXP4"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     P4 (FOXP4) and similar proteins; cd20067"
                     /db_xref="CDD:410841"
     Site            order(464..465,483..484,487,501,503,506,509..510,513,520,
                     527,529)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410841"
     CDS             1..671
                     /gene="FOXP4"
                     /coded_by="XM_041468265.1:201..2216"
                     /db_xref="GeneID:121353992"
ORIGIN      
        1 mmvesaseti rstpsaqngv sslsnqpdgg ggsgggpggg grdgaagaea ngemspvell
       61 hfqqqqalqv arqfllqqat glsspssneg kqpavqvpvs vammspqmit pqqmqqilsp
      121 pqlqallqqq qaimlqqlqe yykkqqeqlh lqlltqqqag kqqpkeplgn kqlafqqqll
      181 qmqqlqqqhl lnlqrqglvs lppgqgtvpl qtlpqavcps dlqqlwkevt atqpvedsik
      241 qegldlttnt snstsfsaak vsppishhpl pngqstmhtp rrdsssheet pgshplyghg
      301 eckwpgcetl cedlgqfvkh lntehalddr staqcrvqmq vvqqleiqla keserlqamm
      361 ahlhmrpsep kpfsqpvsln lvssatlsks tsdtfpdglp hpptsatapi tplrqgpsvi
      421 ssstlhsvgp irrrnsekfc tpisselaqn hefyknadvr ppftyaslir qailetpdrq
      481 ltlneiynwf trmfayfrrn tatwknavrh nlslhkcfvr venvkgavwt vdeheyqkrr
      541 ppkmtgsptl vknmisglgy galnasyqaa laessfplln sptmintssa samlhvghdd
      601 vsstveqvns ngsnsprlsp qqyshpvhvk eepaeaedds rpvslmastn qnvtipddrd
      661 leeelpvedl s
//
LOCUS       XP_041324201            2664 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol 1,4,5-trisphosphate receptor type 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324201
VERSION     XP_041324201.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468267.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2664
                     /product="inositol 1,4,5-trisphosphate receptor type 3"
                     /calculated_mol_wt=304437
     Region          4..230
                     /region_name="Ins145_P3_rec"
                     /note="Inositol 1,4,5-trisphosphate/ryanodine receptor;
                     pfam08709"
                     /db_xref="CDD:462572"
     Region          225..439
                     /region_name="beta-trefoil_MIR_ITPR3"
                     /note="MIR domain, beta-trefoil fold, found in inositol
                     1,4,5-trisphosphate receptor type 3 (ITPR3) and similar
                     proteins; cd23289"
                     /db_xref="CDD:467760"
     Site            order(246..247,249,372..374,386,425..426,428)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467760"
     Site            order(266,268..270,276)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:467760"
     Region          475..670
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     Region          1190..1320
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     Region          1864..1971
                     /region_name="RIH_assoc"
                     /note="RyR and IP3R Homology associated; pfam08454"
                     /db_xref="CDD:462482"
     Region          2262..2521
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..2664
                     /gene="ITPR3"
                     /coded_by="XM_041468267.1:420..8414"
                     /db_xref="GeneID:121353993"
ORIGIN      
        1 mnemssflhi gdivslyaeg svngfistlg lvddrcvvep aagdldnppk kfrdclfkvc
       61 pmnrysaqkq ywkakqtkqd kdkiadvvll qklqhaaqme qkqnetenkk vhgdvvkygs
      121 viqllhmksn kyltvnkrlp alleknamrv tldatgnegs wlfiqpfwkl rsngdnvvvg
      181 dkvilnpvna gqplhasnye ladnagckev nsvncntswk inlfmqfcdh meevlkggdv
      241 vrlfhaeqek fltcdeykgk lhvflrttlr qsatsatssn alwevevvhh dpcrggaghw
      301 nglyrfkhla tgnylaaeen psykgdvaep kaaptggssr asrrntgeki kyrlvavphg
      361 ndiaslfeld pttlqktdsf vprnsyvrlr hlctntwiqs tnvpididee rpirlmlgtc
      421 ptkedkeafa ivsvpvseir dldfandass mlanvvekmn egflsqndrr fviqlledlv
      481 ffvsdvpnng qnvldivvtk pnrerqklmr eqnilkqifg ilkapfkdkg gegplvrlee
      541 lsdqknapyq ymfrlcyrvl rhsqedyrkn qehiakqfgm mqsqigydil aedtitallh
      601 nnrkllekhi tktevetfvs lvrknreprf ldylsdlcvs nhiaipvtqe lickcvldsk
      661 nsdiliktel rpvkemsqth eylsieysee evwltwtdkn ndhheksirq laqearagna
      721 hdenvlsyyr yqlklfarmc ldrqylaike isqqlgvdli flcmademlp fdlrasfchl
      781 mlhvhvdrdp qelvmpvkfa rlwteiptai tikdydsnln vsrddkknkf astmefvedy
      841 lnnvvseavp faneeknklt fevvslahnl iyfgfysfse llrltrtllg iidcvqnpql
      901 mmqavyndev tgknvrrsiq gvgqmmstmv lsrkqsifsp pslstgsape qvdrgrsien
      961 enivvmetkl kileilqfil nvrldyrisy llsvfkkefv evypmqdsaa dgtapafdst
     1021 taamnldrig ehaeamfgvg ksssmlevdd eggrmflrvl ihltmhdypp lisgslqllf
     1081 khfsqrqevl htfkqvqlli saqdvenykv ikseldklrt mvekselwvd kkgstkgdst
     1141 gegnkkekke hgadeeviap gekssenyqi vkgilerlnk mcgvgeqvrk kqqrllknmd
     1201 ahkvmldllq ipyekgdakm meilkfthqf lqkfcagnqe nqallhkhln lfltpgllea
     1261 etmqhiflnn yqlcseinet vpqhfihcva thgrhvqyld flhtiikaeg kyvkkcqdmi
     1321 mteltnagdd vvvfyndkas latllemmta ardgveensp lmyhislvdl laacaegknv
     1381 yteikctsll pledvvrvvt hedcitevkm ayvnfvnhcy vdtevemkei ytsnhiwtlf
     1441 enftldmaqm ckkrekrlpd atlekyvltv vldtinaffs spfsenstsl qthqtivvql
     1501 lqstmrllec pwlqqqhkss vescirtlam vaksrsialp mdldahvssl lnssststvq
     1561 rntssykaat rtfprvsttp nqwdykniie klqdiinale drlkplveae lsvlvdvlhr
     1621 pellfmegte afqrcesggf lsklvqhtkd lmeteeklci kvlrtlqqml vkrnkygerg
     1681 nllrkmlmnn ylqnkrsssk gemgdaaggg qdqdwsaiaa vqcrldrega tklvadlimn
     1741 tknekifqes illairlldg gnteiqksfy nlmtsdkkse kffkvlhdrm kkaqqetkst
     1801 vsvnmsdign kpredkdepd pgtkgrgdtf lmpgtptryp mavgfrkghd pgeqgqnnem
     1861 gvtvlimepi lrflqllcen hnrdlqnflr cqnnktnynl vcetlqfldi mcgsttgglg
     1921 llglyineyn valitqtlet lteycqgpch enqscivthe sngidiital ilndisplck
     1981 yrmdlvlqlk dnasklllal mesrhdsena erilislrpq elvdvikkay lqeeecenae
     2041 vsprevghni yilalqlsrh nkslqqllkp vkriqeeeee gissmlslnn kqlsqmlkst
     2101 apvqeeeedp layyekhtsq ieivrldrsm eqiifpvpgi cefltketky rlfttteqde
     2161 qgskvsdffd qssflhneme wqkklrsmpl mywfsrrmtl wgsisfnlav finiiiaffy
     2221 pyveatsmgv ldsplisllf wilicfsima lftkrygvrp llvalilrsi yylgigltln
     2281 ilgalnltnk ivfvvsfvgn rgtfirgyka mimdveflyh vgyivtsvlg lfvhelfysi
     2341 llfdliyree tlfnviksvt rngrsillta llalilvylf sivgflflkd dfilevdrlp
     2401 dskakddplg mqknvetfvd scssdkiscs aaptaleead peqweracdt llmcivtvln
     2461 hglrngggvg dilrkpskde slfparvvyd llfffiviii vlnlifgvii dtfadlrsek
     2521 qkkeeilktt cficglerdk fdnktvsfee hikyehnmwn ylyfivlvrv knktdytgpe
     2581 syvaqmiknk nldwfprmra mslvsnegeg eqneirnlqd klnttmklvs hltsqlnelk
     2641 eqmteqrkrr qrmgfvdvqn tmnh
//
LOCUS       XP_041324202             125 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquinol-cytochrome-c reductase complex assembly factor 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324202
VERSION     XP_041324202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468268.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..125
                     /product="ubiquinol-cytochrome-c reductase complex
                     assembly factor 2"
                     /calculated_mol_wt=14808
     Region          6..86
                     /region_name="UQCC2_CBP6"
                     /note="Complex III assembly factor UQCC2/CBP6; pfam20180"
                     /db_xref="CDD:466331"
     CDS             1..125
                     /gene="LOC121353994"
                     /coded_by="XM_041468268.1:38..415"
                     /db_xref="GeneID:121353994"
ORIGIN      
        1 maasryrrfl rlceewpvee tkqqrdlgsf lrqrvaqafr egentpisdp eacdqmyesl
       61 vrihtnfykn kyprlkdttf tgvtvedcrt ilatdilkqm edrkkgtwkr lrekfsakkp
      121 eedlk
//
LOCUS       XP_041324203             455 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor EB [Pyrgilauda ruficollis].
ACCESSION   XP_041324203
VERSION     XP_041324203.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468269.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="transcription factor EB"
                     /calculated_mol_wt=50517
     Region          4..156
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          220..310
                     /region_name="bHLHzip_TFEB"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in transcription factor EB (TFEB) and similar
                     proteins; cd18927"
                     /db_xref="CDD:381497"
     Site            order(234..235,237..238,241..242,246,267..268)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381497"
     Site            order(244..245,248..249,251,255,268,272..273,276,278..280,
                     282..283,285..286,289,292..294)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381497"
     Region          315..451
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..455
                     /gene="TFEB"
                     /coded_by="XM_041468269.1:628..1995"
                     /db_xref="GeneID:121353995"
ORIGIN      
        1 masriglrme lmkqqaqqea erervqqqmm mnymqqqrmp vasspaintp vhfqspppvp
       61 gevlkvqsyl enpttyhlqk srdkkvqayl setygnkfaa hvspashspk pppaaspgvr
      121 pghvlsssag nsapnspmam lnigsnpere fdeviddimr lddvlgymnp evhmpntlpm
      181 ssshmnvysg dpqvtaslvg vtssscpadl tqkreltdae sralakerqk kdnhnlierr
      241 rrfnindrik elgmlipkan dldvrwnkgt ilkasvdyik rmqkdlqrsr dlenhsrrle
      301 mankqlllri qelemqarvh glptsspsgv nvaelaqqvv kqeasgdegt lepllpppdp
      361 esqpqpalpa ppqspfhqld fthslsfdds sfpdslepgh stsfpslskk eldlmlmqdt
      421 mlplasdplf samspeaska ssrrssfsme dadml
//
LOCUS       XP_041324204             455 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor EB [Pyrgilauda ruficollis].
ACCESSION   XP_041324204
VERSION     XP_041324204.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468270.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="transcription factor EB"
                     /calculated_mol_wt=50517
     Region          4..156
                     /region_name="MITF_TFEB_C_3_N"
                     /note="MITF/TFEB/TFEC/TFE3 N-terminus; pfam15951"
                     /db_xref="CDD:464952"
     Region          220..310
                     /region_name="bHLHzip_TFEB"
                     /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain
                     found in transcription factor EB (TFEB) and similar
                     proteins; cd18927"
                     /db_xref="CDD:381497"
     Site            order(234..235,237..238,241..242,246,267..268)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381497"
     Site            order(244..245,248..249,251,255,268,272..273,276,278..280,
                     282..283,285..286,289,292..294)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381497"
     Region          315..451
                     /region_name="DUF3371"
                     /note="Domain of unknown function (DUF3371); pfam11851"
                     /db_xref="CDD:463372"
     CDS             1..455
                     /gene="TFEB"
                     /coded_by="XM_041468270.1:155..1522"
                     /db_xref="GeneID:121353995"
ORIGIN      
        1 masriglrme lmkqqaqqea erervqqqmm mnymqqqrmp vasspaintp vhfqspppvp
       61 gevlkvqsyl enpttyhlqk srdkkvqayl setygnkfaa hvspashspk pppaaspgvr
      121 pghvlsssag nsapnspmam lnigsnpere fdeviddimr lddvlgymnp evhmpntlpm
      181 ssshmnvysg dpqvtaslvg vtssscpadl tqkreltdae sralakerqk kdnhnlierr
      241 rrfnindrik elgmlipkan dldvrwnkgt ilkasvdyik rmqkdlqrsr dlenhsrrle
      301 mankqlllri qelemqarvh glptsspsgv nvaelaqqvv kqeasgdegt lepllpppdp
      361 esqpqpalpa ppqspfhqld fthslsfdds sfpdslepgh stsfpslskk eldlmlmqdt
      421 mlplasdplf samspeaska ssrrssfsme dadml
//
LOCUS       XP_041324205             440 aa            linear   VRT 06-MAY-2021
DEFINITION  bystin [Pyrgilauda ruficollis].
ACCESSION   XP_041324205
VERSION     XP_041324205.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468271.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..440
                     /product="bystin"
                     /calculated_mol_wt=49061
     Region          146..432
                     /region_name="Bystin"
                     /note="pfam05291"
                     /db_xref="CDD:461612"
     CDS             1..440
                     /gene="BYSL"
                     /coded_by="XM_041468271.1:71..1393"
                     /db_xref="GeneID:121353996"
ORIGIN      
        1 mpkarrargs gpapalplae qilqdaaprv rarekrgspg gaeepggdgg gdgfvdarls
       61 rrileqarrq qeeleaehgp gapaaprqrs avlgpgsdse ddeewpslek aaaaagrsgd
      121 yggevevdpe dekaiemfmn knpplrrtla diimekitek qtevetalse lsgcpmpqld
      181 prvlevyrgv revlskyrsg klpkafkiip alsnweqily itepeawtaa amyqatrifs
      241 snlkermaqr fynlvllpri rddiaeykrl nfhlymalkk alfkpaawfk giliplcesg
      301 tctlreaiii gsiltkcsip vlhssaallk laemqysgan siflrllidk kyalpfrvld
      361 alvfhflafr seqrllpvlw hqsllalaqr ykedlsseqk eallellkfh shpqispeir
      421 relmnsgtrd vegeqpvame
//
LOCUS       XP_041324206             254 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 20 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324206
VERSION     XP_041324206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468272.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="mediator of RNA polymerase II transcription
                     subunit 20 isoform X1"
                     /calculated_mol_wt=27646
     Region          49..240
                     /region_name="Med20"
                     /note="TATA-binding related factor (TRF) of subunit 20 of
                     Mediator complex; pfam08612"
                     /db_xref="CDD:400779"
     CDS             1..254
                     /gene="MED20"
                     /coded_by="XM_041468272.1:25..789"
                     /db_xref="GeneID:121353997"
ORIGIN      
        1 mggrtregsr rgqprghggn lrvqdaeqsr grgrrcpggs vspgpcrsvs qvpvaegksv
       61 qqtvellarr lealgadkqg tfgvdcetyh taatlgtqgq tgklmyvmhn seyplscfal
      121 fengpclvad anfdtlmvkl kgffqnakan kiesrgtryq ycdflvklgt vtmgpsargi
      181 sveveycpcv iandcwnllm efmqsfmgsh tpgipsvfgs khdstyspgd tmvqymelfn
      241 kirkqqqvpv agir
//
LOCUS       XP_041324207             254 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 20 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324207
VERSION     XP_041324207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468273.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="mediator of RNA polymerase II transcription
                     subunit 20 isoform X2"
                     /calculated_mol_wt=27646
     Region          49..240
                     /region_name="Med20"
                     /note="TATA-binding related factor (TRF) of subunit 20 of
                     Mediator complex; pfam08612"
                     /db_xref="CDD:400779"
     CDS             1..254
                     /gene="MED20"
                     /coded_by="XM_041468273.1:36..800"
                     /db_xref="GeneID:121353997"
ORIGIN      
        1 mggrtregsr rgqprghggn lrvqdaeqsr grgrrcpggs vspgpcrsvs qvpvaegksv
       61 qqtvellarr lealgadkqg tfgvdcetyh taatlgtqgq tgklmyvmhn seyplscfal
      121 fengpclvad anfdtlmvkl kgffqnakan kiesrgtryq ycdflvklgt vtmgpsargi
      181 sveveycpcv iandcwnllm efmqsfmgsh tpgipsvfgs khdstyspgd tmvqymelfn
      241 kirkqqqvpv agir
//
LOCUS       XP_041324208             211 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 20 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324208
VERSION     XP_041324208.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468274.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..211
                     /product="mediator of RNA polymerase II transcription
                     subunit 20 isoform X3"
                     /calculated_mol_wt=23081
     Region          1..197
                     /region_name="Med20"
                     /note="TATA-binding related factor (TRF) of subunit 20 of
                     Mediator complex; pfam08612"
                     /db_xref="CDD:400779"
     CDS             1..211
                     /gene="MED20"
                     /coded_by="XM_041468274.1:55..690"
                     /db_xref="GeneID:121353997"
ORIGIN      
        1 mgvtcvsqvp vaegksvqqt vellarrlea lgadkqgtfg vdcetyhtaa tlgtqgqtgk
       61 lmyvmhnsey plscfalfen gpclvadanf dtlmvklkgf fqnakankie srgtryqycd
      121 flvklgtvtm gpsargisve veycpcvian dcwnllmefm qsfmgshtpg ipsvfgskhd
      181 styspgdtmv qymelfnkir kqqqvpvagi r
//
LOCUS       XP_041324209             236 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 20 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324209
VERSION     XP_041324209.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468275.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..236
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..236
                     /product="mediator of RNA polymerase II transcription
                     subunit 20 isoform X4"
                     /calculated_mol_wt=25748
     Region          1..222
                     /region_name="Med20"
                     /note="TATA-binding related factor (TRF) of subunit 20 of
                     Mediator complex; pfam08612"
                     /db_xref="CDD:400779"
     CDS             1..236
                     /gene="MED20"
                     /coded_by="XM_041468275.1:62..772"
                     /db_xref="GeneID:121353997"
ORIGIN      
        1 mgvtcvsqvp vaegksvqqt vellarrlea lgadkqgtfg vdcetyhtaa tlgtqgqtgk
       61 lmyvmhnsey plscfalfen gpclvadanf dtlmvklkgf fqnakankie srgtryqycd
      121 flvklgtvtm gpsargisve lcsqvefcpc eqlqacrapa glcsqveycp cviandcwnl
      181 lmefmqsfmg shtpgipsvf gskhdstysp gdtmvqymel fnkirkqqqv pvagir
//
LOCUS       XP_041324210             475 aa            linear   VRT 06-MAY-2021
DEFINITION  polymeric immunoglobulin receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324210
VERSION     XP_041324210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="polymeric immunoglobulin receptor-like"
                     /calculated_mol_wt=52889
     Region          18..125
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          32..36
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          46..51
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          89..93
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          103..108
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          120..123
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          136..221
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          137..141
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          146..150
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          188..192
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          202..207
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          216..219
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          223..329
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          236..240
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          251..255
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          295..299
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          309..314
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          323..326
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..475
                     /gene="LOC121353999"
                     /coded_by="XM_041468276.1:72..1499"
                     /db_xref="GeneID:121353999"
ORIGIN      
        1 melralfllp lcfpglqsqt pevqrrregd tlyiqcpyap wttdqqikyw clprgnggcq
       61 evlhtyleds irssderiki kdnrtsktvs vtmadlkven sgtyfcaiys synnyprlkt
      121 islivfrell rweldtltvq cpvgygmawc rgqtdctgpa rrqtsskqse tkslqdrvtm
      181 qyngqgalvv tmknlknqds gvywcalssg htrkmeivls vfkrtqklpa kesgnvtvqc
      241 hykiadyqav skawckikeg kmcnvlvttr sespagnsta rggvriqddt qqgivtvtme
      301 qlqvqdsgvy wcalqdgsdl lrmeevtlsv skalppggfp dserrsqeil lgdscsgntf
      361 lilsvvllil lllalltsia lavrysrlll rtgtreaedt sdraegtaqp gstgrressq
      421 ddskgpayin ldvqshpnpe dslycnvels qaprnpqhve yaviafsqsp rtgre
//
LOCUS       XP_041324211             262 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: triggering receptor expressed on myeloid cells
            2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324211
VERSION     XP_041324211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468277.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="LOW QUALITY PROTEIN: triggering receptor
                     expressed on myeloid cells 2"
                     /calculated_mol_wt=29032
     Region          64..166
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          77..81
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          91..95
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..139
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..154
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          160..163
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..262
                     /gene="TREM2"
                     /coded_by="XM_041468277.1:58..846"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 2 codons"
                     /db_xref="GeneID:121354000"
ORIGIN      
        1 mcrmkkmpss capsfrhske werscpwael alssqllscs fssqpmekll hltlvflsas
       61 caaenvtvva amegdtisvn csydprqwwr ekswcrqldq srcqhvvgap pawlpfpgnr
      121 rgttsirdna raglltvtmr rlrkedagly qcrtdflgqt kslrmvqvev laaadlvthm
      181 peepravqsi srsppdvdft vfyilagflv akfmvavlvg avahsrkkrk rgqnpslgeq
      241 qvlplpadlg hdgiglswes sa
//
LOCUS       XP_041324213             212 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2 homologous antagonist/killer [Pyrgilauda ruficollis].
ACCESSION   XP_041324213
VERSION     XP_041324213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="bcl-2 homologous antagonist/killer"
                     /calculated_mol_wt=24310
     Region          31..181
                     /region_name="Bcl-2_like"
                     /note="Apoptosis regulator proteins of the Bcl-2 family,
                     named after B-cell lymphoma 2. This alignment model spans
                     what have been described as Bcl-2 homology regions BH1,
                     BH2, BH3, and BH4. Many members of this family have an
                     additional C-terminal transmembrane...; cd06845"
                     /db_xref="CDD:132900"
     Site            31..44
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Site            80..88
                     /site_type="active"
                     /note="BH3 [active]"
                     /db_xref="CDD:132900"
     Site            order(83..84,86..87,91,94..95,111..112,115..116,119..120,
                     126,128..129,131..132,136,140)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(119..121,125..137)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     CDS             1..212
                     /gene="BAK1"
                     /coded_by="XM_041468279.1:141..779"
                     /db_xref="GeneID:121354001"
ORIGIN      
        1 masgnegdpp qaqgrrgshr rrlssegrva eeaeevfrsy afyryqqerq ergaelppdp
       61 eieqiqqdle stgsqvgqrl aiigddiyrr ydaefrtmle slqptrdnay ehftkiassl
      121 fesginwgrv iallafgyrm amhvwqrgvs gflrriaryv gdfmlqnria rwiaqqggwe
      181 avqnldnvyv kyvlvaavvv vvhlvlrrfl tp
//
LOCUS       XP_041324214             291 aa            linear   VRT 06-MAY-2021
DEFINITION  G1/S-specific cyclin-D3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324214
VERSION     XP_041324214.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468280.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="G1/S-specific cyclin-D3"
                     /calculated_mol_wt=32132
     Region          2..151
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          156..262
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     CDS             1..291
                     /gene="CCND3"
                     /coded_by="XM_041468280.1:127..1002"
                     /db_xref="GeneID:121354002"
ORIGIN      
        1 mellcvesaa rtpragrdph llgdrrvlqn llsleerysp rvsyfqcvqr dvqpymrkml
       61 afwmlevcee qkceeevfpl amnyvdryla svavqknhlq llgavcmlla sklretmplt
      121 veklciytdn sitpqellhw ellvleklkw dlvsviandf lphilhrlpl prdkvelvqk
      181 haqtfialca tdctfvmypp smiatgsiga aihglglags glggeavtel lagttgtevd
      241 clkacqeqie aalaeslkqa sqsqqefsak aapyggsqpt stptdvtdin l
//
LOCUS       XP_041324215             390 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol hexakisphosphate kinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324215
VERSION     XP_041324215.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468281.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..390
                     /product="inositol hexakisphosphate kinase 3"
                     /calculated_mol_wt=43907
     Region          183..384
                     /region_name="IPK"
                     /note="Inositol polyphosphate kinase; pfam03770"
                     /db_xref="CDD:397715"
     CDS             1..390
                     /gene="IP6K3"
                     /coded_by="XM_041468281.1:176..1348"
                     /db_xref="GeneID:121354003"
ORIGIN      
        1 mvgqspaepr aavllqpfvh qvgghtsmlt ydehtvckpl vsqelsfyes lplamrqftp
       61 qykgivsvhl kkdslgnltl iaspglgqpd scgrldsagg dpavtlwhkc kwshtqvtkt
      121 fkdscpgkml lrtdlqyhtd slledangkq perksynpwg lhchrqhlnr msskhnenkl
      181 hqflllenvv skysypcild lkmgtrqhgd daseekkarh ikkceqstsa slgvricgmq
      241 vyqadtghfl ckdkyygrkl spegfrqtlr qflcngnqlr sdllepiilr lkallavirk
      301 qssyrfysss lliiydgqeh kesadqhlsf pkthgtnpsr vdvrmidfah ttfkgsksnp
      361 nptsydgpdh gyifglenli kilqsllegk
//
LOCUS       XP_041324216             388 aa            linear   VRT 06-MAY-2021
DEFINITION  gastricsin [Pyrgilauda ruficollis].
ACCESSION   XP_041324216
VERSION     XP_041324216.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468282.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="gastricsin"
                     /calculated_mol_wt=41819
     Region          19..44
                     /region_name="A1_Propeptide"
                     /note="A1 Propeptide; pfam07966"
                     /db_xref="CDD:462326"
     Region          70..385
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(91,93,95,131..133,179)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133144"
     Site            91..93
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133144"
     Site            91
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133144"
     Site            order(131..134,138..141)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133144"
     CDS             1..388
                     /gene="PGC"
                     /coded_by="XM_041468282.1:1..1167"
                     /db_xref="GeneID:121354004"
ORIGIN      
        1 mkwlpvvlac lqlaegavrl slkkglsire kmraagvldd flkhikydpv kkyqpsqgsv
       61 vrepitnhld ssyfgeisig eppqkflvlf dtgssnlwvp stdckspacf nhakfkasas
      121 atfspsgqsl tvsygsgsvt malgsdtlri qsitvtqqel glsqeeptqp fyfadfdgil
      181 gmafpslavg gtatalggml qqeqlaepif sfyfsrqpty eyggelilgg vepglfqgdi
      241 twapvtqkly wqvaleevai gqsvtswcsq gcqaivdtgt flltvpqeyi esvlealgaq
      301 etsygyavdc sdtpsmppit fgiggarlal ppsayvlnsn gyctlaievt ylpsqdgqpl
      361 wilgnvflke yytafdmann rvgfalsa
//
LOCUS       XP_041324217             382 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic mammalian chitinase [Pyrgilauda ruficollis].
ACCESSION   XP_041324217
VERSION     XP_041324217.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468283.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="acidic mammalian chitinase"
                     /calculated_mol_wt=42194
     Region          23..380
                     /region_name="GH18_chitolectin_chitotriosidase"
                     /note="This conserved domain family includes a large
                     number of catalytically inactive chitinase-like lectins
                     (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1,
                     oviductin, and AMCase (acidic mammalian chitinase), as
                     well as catalytically active...; cd02872"
                     /db_xref="CDD:119351"
     Site            order(26,30,98..99,137,139..140,185..186,209,211..212,217,
                     260,262,290,353)
                     /site_type="active"
                     /db_xref="CDD:119351"
     CDS             1..382
                     /gene="CHIA"
                     /coded_by="XM_041468283.1:1..1149"
                     /db_xref="GeneID:121354005"
ORIGIN      
        1 mpcpgpgrpl hgrclpagta yvltcyftnw aqyrpgegry tpenidpnlc shliyafagm
       61 nnneittyew ndetlyksfn glknqnrnlk tllaiggwnf gtqkfstmvs tpqnrqtfin
      121 svvrflrqyg fdgldldwey pgsrgspaqd kslftvlvke llaafeqeaq qtnrprlmvt
      181 aavagglsti qsgyeiaelg kyldyihvmt ydfhgpwdgs tgensplfds gstfsveyam
      241 nywknngapa qkllvgfpty gksftlqsps ntaigapssg pgpagpytre agllayyeic
      301 tflssgatqa wdapedvpya ykgsewvgyd neksfglkvd wlkknnfgga mvwtidlddf
      361 tgtfchqgky plisslkrgl gl
//
LOCUS       XP_041324218             200 aa            linear   VRT 06-MAY-2021
DEFINITION  protein pitchfork [Pyrgilauda ruficollis].
ACCESSION   XP_041324218
VERSION     XP_041324218.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468284.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="protein pitchfork"
                     /calculated_mol_wt=21506
     CDS             1..200
                     /gene="PIFO"
                     /coded_by="XM_041468284.1:1..603"
                     /db_xref="GeneID:121354006"
ORIGIN      
        1 maarhdakav akpisfgttq erkmfpyhca pdrlgieglg vrgspslgpg sylgpqsnvl
       61 qssvssrpls tlgyvvgart aprfpqkaqs gtpgpaaygp fpeqprrprp gpapapfcss
      121 sprfpnrlld rdrypgpgty dipeslgrkv awpgafgapa rgalpqpepr mvkmqvqkmt
      181 vdkkfqknqg reaylklyhg
//
LOCUS       XP_041324219             544 aa            linear   VRT 06-MAY-2021
DEFINITION  prickle-like protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324219
VERSION     XP_041324219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468285.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..544
                     /product="prickle-like protein 4"
                     /calculated_mol_wt=58091
     Region          37..152
                     /region_name="PET"
                     /note="PET ((Prickle Espinas Testin) domain is involved in
                     protein-protein interactions; cl05674"
                     /db_xref="CDD:471291"
     Region          160..216
                     /region_name="LIM1_Testin_like"
                     /note="The first LIM domain of Testin-like family;
                     cd09340"
                     /db_xref="CDD:188726"
     Site            order(160,163,185,188,191,194,212,215)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188726"
     Region          222..277
                     /region_name="LIM2_Testin_like"
                     /note="The second LIM domain of Testin-like family;
                     cd09341"
                     /db_xref="CDD:188727"
     Site            order(224,227,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188727"
     Region          284..340
                     /region_name="LIM3_Testin_like"
                     /note="The third LIM domain of Testin-like family;
                     cd09342"
                     /db_xref="CDD:188728"
     Site            order(284,287,306,311,314,317,335,339)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188728"
     CDS             1..544
                     /gene="PRICKLE4"
                     /coded_by="XM_041468285.1:1..1635"
                     /db_xref="GeneID:121354007"
ORIGIN      
        1 msqwpggtaa agagleraak pgaaesgars agkgqlmslp spawpqrdep spcgttgglp
       61 passdsdsgc aleeyleppe vppcfgprsp ppgspsersr lrarallqql ppqdcderyc
      121 pglaeeerrq lrafsarrrq ealgqglacp vpgpchgcpc rkcgrrlnkg dpgisasrlg
      181 dqfwhpscfs chfchqqlvd liyfqqdgri ycgrhhaelf rprcascdql ifmeecieae
      241 grrwhlehfc clecdeplrg qryvmrsgrp ccrgcfeslf aepcqacgdp igadseevth
      301 qglhwharaa cfccslcrap lrgqpltcrr grlfcsdtcs rgqdasstas dssdsafasa
      361 pspdstplpr agaagrssaa ggcrqrgegd eafsdqapvh pafrspedlg aatreqssda
      421 akehpgmlap pvghpsapqp gperpnepra lghsllgape prraagngnp qfqagtsppr
      481 hspraedgte eddswcptcs sssdsdseee gfffgkpipk pgmnslgrep pgrgsrtakh
      541 csvs
//
LOCUS       XP_041324221             217 aa            linear   VRT 06-MAY-2021
DEFINITION  myoD family inhibitor [Pyrgilauda ruficollis].
ACCESSION   XP_041324221
VERSION     XP_041324221.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468287.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="myoD family inhibitor"
                     /calculated_mol_wt=22592
     Region          <130..217
                     /region_name="MDFI"
                     /note="MyoD family inhibitor; pfam15316"
                     /db_xref="CDD:464641"
     CDS             1..217
                     /gene="MDFI"
                     /coded_by="XM_041468287.1:1..654"
                     /db_xref="GeneID:121354008"
ORIGIN      
        1 meqpaassag evpepslpvp rqipavprkd kalegdkspv tvltkgprae lggapeavtc
       61 qpqvrpppqp pgpctqllpn geagngmcra vpsaqkpqrk lqphhsinsq sskkskgssk
      121 spsshipiea qedccvhcil sclfcefltl cnivldcatc gsctsedsci cccccnsgec
      181 adcdlpcdmd cgiidacces adcleicmec cglcfss
//
LOCUS       XP_041324222             477 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor substrate 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324222
VERSION     XP_041324222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="fibroblast growth factor receptor substrate 3
                     isoform X1"
                     /calculated_mol_wt=52872
     Region          15..106
                     /region_name="PTB_FRS2"
                     /note="Fibroblast growth factor receptor substrate 2
                     phosphotyrosine-binding domain; cd01202"
                     /db_xref="CDD:269913"
     Site            order(25..28,33,36,47,49..50,55,57,60,62..69,71,73..74,82,
                     85..89,98,102,105)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269913"
     CDS             1..477
                     /gene="FRS3"
                     /coded_by="XM_041468288.1:288..1721"
                     /db_xref="GeneID:121354009"
ORIGIN      
        1 mgsccsclct dsipdnhptk fkvtnvddeg helgsgvmel tprelilhth krdavrwpyl
       61 clrrygfdsn lfsfesgrrc htgqgifafk csraeeifnl lqdlmqcnsi nvveepvvit
      121 rnshpserel ahspqgpssl gytglpngfh sfpgeslsys aaqhpsvssl rhssvgedst
      181 hpllgpeeqs htyvntgepe prgrhcmhsl peahppfppr nhscsledrn pqvflqpgev
      241 kfvlapssgy rrlcrhprec qphlcppnnn nnecqqgcps pqcvyenlng lvapstsslc
      301 ragrskvsre dgscsqrrsa llhyenlpal pplwelqpar hrdedagtap tpspngfsea
      361 geeeplqnsa gseprraflp rprrsrlpnv fsfdfprpcp epprqlnyiq velepepckg
      421 qqeprvappa spgarrtdsy avidlkktaa msslqralpr ddgtsrktrh nstdlpl
//
LOCUS       XP_041324223             442 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor receptor substrate 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324223
VERSION     XP_041324223.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468289.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..442
                     /product="fibroblast growth factor receptor substrate 3
                     isoform X2"
                     /calculated_mol_wt=46639
     Region          15..106
                     /region_name="PTB_FRS2"
                     /note="Fibroblast growth factor receptor substrate 2
                     phosphotyrosine-binding domain; cd01202"
                     /db_xref="CDD:269913"
     Site            order(25..28,33,36,47,49..50,55,57,60,62..69,71,73..74,82,
                     85..89,98,102,105)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269913"
     CDS             1..442
                     /gene="FRS3"
                     /coded_by="XM_041468289.1:288..1616"
                     /db_xref="GeneID:121354009"
ORIGIN      
        1 mgsccsclct dsipdnhptk fkvtnvddeg helgsgvmel tprelilhth krdavrwpyl
       61 clrrygfdsn lfsfesgrrc htgqgifafk csraeeifnl lqdlmqcnsi nvveepvvit
      121 rnshpserel ahspqgpssl gytglpngfh sfpgeslsys aaqhpsvssl rhssvgedst
      181 hpllgpeeqe pqllpgrpqp pglpaargge iragsqlrlp pavpappgmp asplppqqqq
      241 qrvpaglsvp tvrlrepqra ggpqhlvpvp gwplqgvpgg rellpaplga aalrepagaa
      301 aalgaaagpa qgrgrwhgth avpkwllrgr rggapaefrg lgaaprfpaq aaaqppaqrl
      361 qlrlppalpg astaaqlhpg gagaralqgt agaaggtscq prcpphrllr rhrpqkdggh
      421 vqpaagpaqg rwhleensaq qh
//
LOCUS       XP_041324224             303 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription initiation factor TFIID subunit 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324224
VERSION     XP_041324224.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468290.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..303
                     /product="transcription initiation factor TFIID subunit 8"
                     /calculated_mol_wt=33349
     Region          28..111
                     /region_name="HFD_TAF8"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 8 (TAF8) and similar
                     proteins; cd22918"
                     /db_xref="CDD:467043"
     Site            order(28,38,46..49,73,75,77..78,81,85,95)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467043"
     Site            order(29,32..33,36..37,39..41,44..47,50,52..53,56..57,
                     60..62,64..66,68..70,72..73,76,84..86,89..90,93,98,100,
                     102..104,106..111)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467043"
     Region          140..193
                     /region_name="TAF8"
                     /note="TATA Binding Protein (TBP) Associated Factor 8;
                     cd08049"
                     /db_xref="CDD:176263"
     CDS             1..303
                     /gene="TAF8"
                     /coded_by="XM_041468290.1:27..938"
                     /db_xref="GeneID:121354010"
ORIGIN      
        1 madtasggsg tragskqagt padnyqlarr rtlqvvvssl lteagfesae kaavetltem
       61 iqsyiseigr saksycehta rtqptlsdiv vtlvemgfnv etlpayakrs qrmvitappv
      121 tnqpvtpkal tagqnkphpp hipghfpefp dphtyiktpt yrepvsdyqv lrekaasqrr
      181 dveraltrfm aktgetqslf kddvstfpli aarpftvpyl tallpselem qqmeetdsse
      241 qdeqtdtenl plhmstedag aekentsvlq qssslagsrn geenvidnpy lrpvkkpkir
      301 rkk
//
LOCUS       XP_041324225             682 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 49 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324225
VERSION     XP_041324225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..682
                     /product="ubiquitin carboxyl-terminal hydrolase 49 isoform
                     X1"
                     /calculated_mol_wt=78275
     Region          26..87
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          106..>235
                     /region_name="PTZ00436"
                     /note="60S ribosomal protein L19-like protein;
                     Provisional"
                     /db_xref="CDD:185616"
     Region          253..656
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(257,262,617,635)
                     /site_type="active"
                     /db_xref="CDD:239072"
     CDS             1..682
                     /gene="USP49"
                     /coded_by="XM_041468291.1:283..2331"
                     /db_xref="GeneID:121354011"
ORIGIN      
        1 mdrckhvgrl rlaqdhsiln pqkwqcvdch tteslwaclk cshvacgryi eehalrhfqe
       61 trhplamevh elyvfcylcq dyvlndnpeg dlkllrssls aikgqrsgrt lrsmalaeda
      121 wrrrspqgqs qmltalwhrr qallaralrt wfhkssrgql klkekkqmee lekkkeaarq
      181 rrqemkrqll eelastpprk sarllshvhr esliprkfre vatasptsrq vqssrlkqfy
      241 sirrqplmtp gvtglrnlgn tcymnsilqv lshlqkfrec fltldlcete ellaktvngr
      301 armpgklang aaanepgkpd kvgssgtqss paglnggssi srsleliqpk epsskhislc
      361 helhtlfrvm wsgkwalvsp famlhsvwsl ipafrgydqq daqeflcell dkvqqelese
      421 gsrrrilipf sqrkltkqvl kvvntifhgq llsqvtcrtc nyksntvepf wdlslefper
      481 yhslekgilp vpqaecllte mlakftetea legriyacdq cnskrrkssp kplvlseakk
      541 qlliyrlpqv lrlhlkrfrw sernhrekig vhvlfeqvln mepyccrdsl pslatetcvy
      601 dlsavvmhhg kgfgsghyta ycynteggfw vhcndsklnv csveevcktq ayilfytqrt
      661 lqdkagipek qlqtqvfatq nq
//
LOCUS       XP_041324226             587 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 49 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324226
VERSION     XP_041324226.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468292.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="ubiquitin carboxyl-terminal hydrolase 49 isoform
                     X2"
                     /calculated_mol_wt=67489
     Region          26..87
                     /region_name="zf-UBP"
                     /note="Zn-finger in ubiquitin-hydrolases and other
                     protein; pfam02148"
                     /db_xref="CDD:460464"
     Region          106..>235
                     /region_name="PTZ00436"
                     /note="60S ribosomal protein L19-like protein;
                     Provisional"
                     /db_xref="CDD:185616"
     Region          253..>575
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Region          254..>340
                     /region_name="COG5533"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]"
                     /db_xref="CDD:444284"
     CDS             1..587
                     /gene="USP49"
                     /coded_by="XM_041468292.1:2536..4299"
                     /db_xref="GeneID:121354011"
ORIGIN      
        1 mdrckhvgrl rlaqdhsiln pqkwqcvdch tteslwaclk cshvacgryi eehalrhfqe
       61 trhplamevh elyvfcylcq dyvlndnpeg dlkllrssls aikgqrsgrt lrsmalaeda
      121 wrrrspqgqs qmltalwhrr qallaralrt wfhkssrgql klkekkqmee lekkkeaarq
      181 rrqemkrqll eelastpprk sarllshvhr esliprkfre vatasptsrq vqssrlkqfy
      241 sirrqplmtp gvtglrnlgn tcymnsilqv lshlqkfrec fltldlcete ellaktvngr
      301 armpgklang aaanepgkpd kvgssgtqss paglnggssi srsleliqpk epsskhislc
      361 helhtlfrvm wsgkwalvsp famlhsvwsl ipafrgydqq daqeflcell dkvqqelese
      421 gsrrrilipf sqrkltkqvl kvvntifhgq llsqvtcrtc nyksntvepf wdlslefper
      481 yhslekgilp vpqaecllte mlakftetea legriyacdq cnskrrkssp kplvlseakk
      541 qlliyrlpqv lrlhlkrfrw sernhrekig vhvlfeqvfg ctamtpn
//
LOCUS       XP_041324227             601 aa            linear   VRT 06-MAY-2021
DEFINITION  basic proline-rich protein-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324227
VERSION     XP_041324227.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468293.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="basic proline-rich protein-like isoform X1"
                     /calculated_mol_wt=65310
     Region          <30..537
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <61..>121
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          526..596
                     /region_name="Lge1_periphilin-like"
                     /note="Eukaryotic transcriptional regulatory protein Lge1,
                     periphilin, and similar proteins; cl13008"
                     /db_xref="CDD:448781"
     CDS             1..601
                     /gene="LOC121354012"
                     /coded_by="XM_041468293.1:120..1925"
                     /db_xref="GeneID:121354012"
ORIGIN      
        1 maaeripqlr gperpsgrmf papgcrrgfp repapwwdgp wprppagped twdeppwdep
       61 pwdgppcdgp hcdgppwdgp pcdgppqdgp pwdgppsdgp pwneppwnet pwngppcdgp
      121 pcdgppwngp rrdgppwehq prrwrrrrhp pspraprpfp gpadapwkee eedrrwaprd
      181 cpqpppwddr epipgpeddf gecwyqdppp dpwpeypeee qpppwpparp pgnlgtfreh
      241 rppwshrpaa rprghlrqli lvprawcprp prghkphskp scpapskrsq pearkepqpp
      301 epprppappq gaaerleqpq dvpvgtggvl eppsparspl espaadpgaa eplveleagq
      361 tpvgsqdhdp capgaepapp eetsrnpeiq erlevepcsp gvpkagsahg shpqspadpa
      421 krelldssss geagaelsph sweqlphgag eteaegaqdg plqslqppen lqlppesaae
      481 peaqpsqasp eispgpqpga getnlavsgq qqlcsvlptp cpagidprsa avlrrkakie
      541 lsyqqfslsi avvatmllqk epsmeaalgl alranlrqcr lhhlqqleef idsldsgtpg
      601 l
//
LOCUS       XP_041324229             599 aa            linear   VRT 06-MAY-2021
DEFINITION  basic proline-rich protein-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324229
VERSION     XP_041324229.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468295.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024520984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..599
                     /product="basic proline-rich protein-like isoform X2"
                     /calculated_mol_wt=65151
     Region          <28..535
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <59..>119
                     /region_name="PTZ00395"
                     /note="Sec24-related protein; Provisional"
                     /db_xref="CDD:185594"
     Region          524..594
                     /region_name="Lge1_periphilin-like"
                     /note="Eukaryotic transcriptional regulatory protein Lge1,
                     periphilin, and similar proteins; cl13008"
                     /db_xref="CDD:448781"
     CDS             1..599
                     /gene="LOC121354012"
                     /coded_by="XM_041468295.1:37..1836"
                     /db_xref="GeneID:121354012"
ORIGIN      
        1 mlripqlrgp erpsgrmfpa pgcrrgfpre papwwdgpwp rppagpedtw deppwdeppw
       61 dgppcdgphc dgppwdgppc dgppqdgppw dgppsdgppw neppwnetpw ngppcdgppc
      121 dgppwngprr dgppwehqpr rwrrrrhpps praprpfpgp adapwkeeee drrwaprdcp
      181 qpppwddrep ipgpeddfge cwyqdpppdp wpeypeeeqp ppwpparppg nlgtfrehrp
      241 pwshrpaarp rghlrqlilv prawcprppr ghkphskpsc papskrsqpe arkepqppep
      301 prppappqga aerleqpqdv pvgtggvlep psparsples paadpgaaep lveleagqtp
      361 vgsqdhdpca pgaepappee tsrnpeiqer levepcspgv pkagsahgsh pqspadpakr
      421 elldssssge agaelsphsw eqlphgaget eaegaqdgpl qslqppenlq lppesaaepe
      481 aqpsqaspei spgpqpgage tnlavsgqqq lcsvlptpcp agidprsaav lrrkakiels
      541 yqqfslsiav vatmllqkep smeaalglal ranlrqcrlh hlqqleefid sldsgtpgl
//
LOCUS       XP_041324230             237 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354013, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324230
VERSION     XP_041324230.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468296.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521029.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>237
                     /product="uncharacterized protein LOC121354013"
     Region          <121..219
                     /region_name="2A0308"
                     /note="L-type amino acid transporter; TIGR00911"
                     /db_xref="CDD:273332"
     CDS             1..237
                     /gene="LOC121354013"
                     /coded_by="XM_041468296.1:<1..>711"
                     /codon_start=2
                     /db_xref="GeneID:121354013"
ORIGIN      
        1 fgnlginsvn lglnlglnsv nlginlginp vnlgrnlgin slnlglnsgi nsvnlgiksv
       61 nlglnsgins vkfgdkfckf gdksckfgdk fgakfgdfgs vpprapppfa gvagwawpda
      121 spapqcvstl lmlvtgdiyt linyvgfvny lwygvtvagl lllrwreprl prpikvnlaf
      181 pavyllfwga lllfsvwsep lvcgiglaim atgapvyllc lrggprppai rravgeg
//
LOCUS       XP_041324231             344 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoprotein D0 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324231
VERSION     XP_041324231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="heterogeneous nuclear ribonucleoprotein D0
                     isoform X1"
                     /calculated_mol_wt=37531
     Region          <23..64
                     /region_name="CBFNT"
                     /note="CBFNT (NUC161) domain; pfam08143"
                     /db_xref="CDD:311868"
     Region          66..139
                     /region_name="RRM1_hnRNPD"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and
                     similar proteins; cd12756"
                     /db_xref="CDD:410150"
     Region          150..224
                     /region_name="RRM2_hnRNPD"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and
                     similar proteins; cd12583"
                     /db_xref="CDD:241027"
     Site            order(150,152,154..155,179..182,184..185,188..190,192,194,
                     211,218..220,222..224)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:241027"
     CDS             1..344
                     /gene="HNRNPD"
                     /coded_by="XM_041468297.1:199..1233"
                     /db_xref="GeneID:121354014"
ORIGIN      
        1 msdqqfalds aavaagaggs aaepaeqpeg qagagstdgg ggggggvese gakidaskne
       61 edegkmfigg lswdttkkdl kdyfskfgev vdctlkldpi tgrsrgfgfv lfkesesvdk
      121 vmdqkehkln gkvidpkrak amktkepvkk ifvgglspdt peekireyfg gfgevesiel
      181 pmdnktnkrr gfcfitfkee dpvkkimekk yhnvglskce ikvamskeqy qqqqqwgsrg
      241 gfvgrargrg ggpsqswnqg ysnywnqgyg nygynsqgyg gyggydytgy nnyygygdys
      301 tgtslqalcr adftiltgpl nadrvrdaha leccrlvemq yfli
//
LOCUS       XP_041324232             332 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoprotein D0 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324232
VERSION     XP_041324232.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468298.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..332
                     /product="heterogeneous nuclear ribonucleoprotein D0
                     isoform X2"
                     /calculated_mol_wt=36163
     Region          <23..64
                     /region_name="CBFNT"
                     /note="CBFNT (NUC161) domain; pfam08143"
                     /db_xref="CDD:311868"
     Region          66..139
                     /region_name="RRM1_hnRNPD"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and
                     similar proteins; cd12756"
                     /db_xref="CDD:410150"
     Region          150..224
                     /region_name="RRM2_hnRNPD"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and
                     similar proteins; cd12583"
                     /db_xref="CDD:241027"
     Site            order(150,152,154..155,179..182,184..185,188..190,192,194,
                     211,218..220,222..224)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:241027"
     CDS             1..332
                     /gene="HNRNPD"
                     /coded_by="XM_041468298.1:660..1658"
                     /db_xref="GeneID:121354014"
ORIGIN      
        1 msdqqfalds aavaagaggs aaepaeqpeg qagagstdgg ggggggvese gakidaskne
       61 edegkmfigg lswdttkkdl kdyfskfgev vdctlkldpi tgrsrgfgfv lfkesesvdk
      121 vmdqkehkln gkvidpkrak amktkepvkk ifvgglspdt peekireyfg gfgevesiel
      181 pmdnktnkrr gfcfitfkee dpvkkimekk yhnvglskce ikvamskeqy qqqqqwgsrg
      241 gfvgrargrg ggpsqswnqg ysnywnqgyg nygynsqgyg gyggydytgy nnyygygdys
      301 tgtslqalcr adftiltgpl nadrvemqyf li
//
LOCUS       XP_041324234             322 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoprotein D0 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324234
VERSION     XP_041324234.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468300.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..322
                     /product="heterogeneous nuclear ribonucleoprotein D0
                     isoform X3"
                     /calculated_mol_wt=35116
     Region          <23..64
                     /region_name="CBFNT"
                     /note="CBFNT (NUC161) domain; pfam08143"
                     /db_xref="CDD:311868"
     Region          66..139
                     /region_name="RRM1_hnRNPD"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and
                     similar proteins; cd12756"
                     /db_xref="CDD:410150"
     Region          150..224
                     /region_name="RRM2_hnRNPD"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) and
                     similar proteins; cd12583"
                     /db_xref="CDD:241027"
     Site            order(150,152,154..155,179..182,184..185,188..190,192,194,
                     211,218..220,222..224)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:241027"
     CDS             1..322
                     /gene="HNRNPD"
                     /coded_by="XM_041468300.1:179..1147"
                     /db_xref="GeneID:121354014"
ORIGIN      
        1 msdqqfalds aavaagaggs aaepaeqpeg qagagstdgg ggggggvese gakidaskne
       61 edegkmfigg lswdttkkdl kdyfskfgev vdctlkldpi tgrsrgfgfv lfkesesvdk
      121 vmdqkehkln gkvidpkrak amktkepvkk ifvgglspdt peekireyfg gfgevesiel
      181 pmdnktnkrr gfcfitfkee dpvkkimekk yhnvglskce ikvamskeqy qqqqqwgsrg
      241 gfvgrargrg ggpsqswnqg ysnywnqgyg nygynsqgyg gyggydytgy nnyygygdys
      301 nqqsgygkvs rrgghqnsyk py
//
LOCUS       XP_041324235             301 aa            linear   VRT 06-MAY-2021
DEFINITION  heterogeneous nuclear ribonucleoprotein D-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324235
VERSION     XP_041324235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="heterogeneous nuclear ribonucleoprotein D-like"
                     /calculated_mol_wt=33386
     Region          31..106
                     /region_name="RRM1_hnRPDL"
                     /note="RNA recognition motif 1 (RRM1) found in
                     heterogeneous nuclear ribonucleoprotein D-like (hnRNP
                     D-like or hnRNP DL) and similar proteins; cd12758"
                     /db_xref="CDD:410152"
     Region          116..190
                     /region_name="RRM2_hnRPDL"
                     /note="RNA recognition motif 2 (RRM2) found in
                     heterogeneous nuclear ribonucleoprotein D-like (hnRNP DL)
                     and similar proteins; cd12585"
                     /db_xref="CDD:409998"
     Site            order(116,118,120..121,145..148,150..151,154..156,158,160,
                     177,184..186,188..190)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:409998"
     CDS             1..301
                     /gene="HNRNPDL"
                     /coded_by="XM_041468301.1:58..963"
                     /db_xref="GeneID:121354015"
ORIGIN      
        1 medatemsgg qeefaegski nasknqqddg kmfigglswd tskkdlteyl srfgevvdct
       61 iktdpvtgrs rgfgfvlfkd aasvekvlel kehkldgkli dpkrakalkg keppkkvfvg
      121 glspdtseeq ikeyfgafge ienielpmdt ktnerrgfcf itytdeepvk kllesryhqi
      181 gsgkceikva qpkevyrqqq qqqkggksns sggrgggrgr grgqgqnwnq gfnnyydqgy
      241 gnynsaysdq sysgyggydy sgynypnygy gpgytdysgq qstygkasrg ggnhqnnyqp
      301 y
//
LOCUS       XP_041324236             261 aa            linear   VRT 06-MAY-2021
DEFINITION  enolase-phosphatase E1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324236
VERSION     XP_041324236.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468302.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..261
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..261
                     /product="enolase-phosphatase E1"
                     /calculated_mol_wt=28907
     Region          12..234
                     /region_name="HAD_EP"
                     /note="Enolase-phosphatase similar to human
                     enolase-phosphatase E1 and and Xanthomonas oryzae pv.
                     Oryzae enolase-phosphatase Xep; cd01629"
                     /db_xref="CDD:319768"
     Site            order(16..20,27,31..32,118,153..155,159,187,211..212,
                     216..217)
                     /site_type="active"
                     /db_xref="CDD:319768"
     CDS             1..261
                     /gene="ENOPH1"
                     /coded_by="XM_041468302.1:86..871"
                     /db_xref="GeneID:121354016"
ORIGIN      
        1 mgvlpvpaev railldiegt ttpiafvqet lfpyikdnvk eylrahweee ecqrdvgllr
       61 kqaqedssld gavpiplesg sgeeelervi qavvdnvhwq msldrkttal kqlqghmwra
      121 ayatghvkge ifedvvpair kwreagmkvy iyssgsveaq kllfgysteg dilelfdghf
      181 dtkigpkves esyrriaasi gcatnnilfl tdvpreanaa eeadthvavv irpgnagltd
      241 deksyyslis sftelflpss t
//
LOCUS       XP_041324238             253 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 150C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324238
VERSION     XP_041324238.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468304.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..253
                     /product="transmembrane protein 150C isoform X1"
                     /calculated_mol_wt=27982
     Region          13..221
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..253
                     /gene="TMEM150C"
                     /coded_by="XM_041468304.1:412..1173"
                     /db_xref="GeneID:121354017"
ORIGIN      
        1 masgmdgkkc smwmflplvf tlftsaglwi vyfiavednk ilplsvpdrk pgskrppyis
       61 iagdappasc vfsqvmnmaa flalvvavlr fiqlkpkvlt pwlnisglva lclasfgmtl
      121 lgnfqlsnde eihnvgtslt fgfgtlacwi qsaltlkinl knegrkagip rvalsasitl
      181 cvvlyfilma qgihmhasri qwglvmcflc yfgtfavefr hyrfeiicse yqenflsfse
      241 slseaseyqt dqv
//
LOCUS       XP_041324239             253 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 150C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324239
VERSION     XP_041324239.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468305.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..253
                     /product="transmembrane protein 150C isoform X1"
                     /calculated_mol_wt=27982
     Region          13..221
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..253
                     /gene="TMEM150C"
                     /coded_by="XM_041468305.1:296..1057"
                     /db_xref="GeneID:121354017"
ORIGIN      
        1 masgmdgkkc smwmflplvf tlftsaglwi vyfiavednk ilplsvpdrk pgskrppyis
       61 iagdappasc vfsqvmnmaa flalvvavlr fiqlkpkvlt pwlnisglva lclasfgmtl
      121 lgnfqlsnde eihnvgtslt fgfgtlacwi qsaltlkinl knegrkagip rvalsasitl
      181 cvvlyfilma qgihmhasri qwglvmcflc yfgtfavefr hyrfeiicse yqenflsfse
      241 slseaseyqt dqv
//
LOCUS       XP_041324240             253 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 150C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324240
VERSION     XP_041324240.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468306.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..253
                     /product="transmembrane protein 150C isoform X1"
                     /calculated_mol_wt=27982
     Region          13..221
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..253
                     /gene="TMEM150C"
                     /coded_by="XM_041468306.1:353..1114"
                     /db_xref="GeneID:121354017"
ORIGIN      
        1 masgmdgkkc smwmflplvf tlftsaglwi vyfiavednk ilplsvpdrk pgskrppyis
       61 iagdappasc vfsqvmnmaa flalvvavlr fiqlkpkvlt pwlnisglva lclasfgmtl
      121 lgnfqlsnde eihnvgtslt fgfgtlacwi qsaltlkinl knegrkagip rvalsasitl
      181 cvvlyfilma qgihmhasri qwglvmcflc yfgtfavefr hyrfeiicse yqenflsfse
      241 slseaseyqt dqv
//
LOCUS       XP_041324241             253 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 150C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324241
VERSION     XP_041324241.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468307.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..253
                     /product="transmembrane protein 150C isoform X1"
                     /calculated_mol_wt=27982
     Region          13..221
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..253
                     /gene="TMEM150C"
                     /coded_by="XM_041468307.1:288..1049"
                     /db_xref="GeneID:121354017"
ORIGIN      
        1 masgmdgkkc smwmflplvf tlftsaglwi vyfiavednk ilplsvpdrk pgskrppyis
       61 iagdappasc vfsqvmnmaa flalvvavlr fiqlkpkvlt pwlnisglva lclasfgmtl
      121 lgnfqlsnde eihnvgtslt fgfgtlacwi qsaltlkinl knegrkagip rvalsasitl
      181 cvvlyfilma qgihmhasri qwglvmcflc yfgtfavefr hyrfeiicse yqenflsfse
      241 slseaseyqt dqv
//
LOCUS       XP_041324242             252 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 150C isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324242
VERSION     XP_041324242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468308.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..252
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..252
                     /product="transmembrane protein 150C isoform X2"
                     /calculated_mol_wt=27941
     Region          12..220
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..252
                     /gene="TMEM150C"
                     /coded_by="XM_041468308.1:411..1169"
                     /db_xref="GeneID:121354017"
ORIGIN      
        1 macmdgkkcs mwmflplvft lftsaglwiv yfiavednki lplsvpdrkp gskrppyisi
       61 agdappascv fsqvmnmaaf lalvvavlrf iqlkpkvltp wlnisglval clasfgmtll
      121 gnfqlsndee ihnvgtsltf gfgtlacwiq saltlkinlk negrkagipr valsasitlc
      181 vvlyfilmaq gihmhasriq wglvmcflcy fgtfavefrh yrfeiicsey qenflsfses
      241 lseaseyqtd qv
//
LOCUS       XP_041324243            1282 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324243
VERSION     XP_041324243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1282
                     /product="protein transport protein Sec31A isoform X1"
                     /calculated_mol_wt=138820
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <756..1153
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1282
                     /gene="SEC31A"
                     /coded_by="XM_041468309.1:104..3952"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqtyqatqq ysgtggpaly qpqqpiaapa sasypspapn ttpsylpsap
      961 ahsmpsplyp gqpqpsptsl npissfpvpp sgtsfqhgrp glpatsvaya lptgptgtlp
     1021 atsdlpasqr teslpsqdqa spftgelgpq ngwndpptln raakkkkvpd nflppvpits
     1081 pimnpladpq sqmqqpqapa vpssapsfqp phlpagqmqv lqggfqpaaq plgpstmapt
     1141 vskpstegap gapignaiqh vqalptekit kkpipeehli lkttfealiq rcllsasdpq
     1201 tkrklddank rleflydklr eqtlsptiis glhnivksie trnyqeglni hthivstsnf
     1261 setsafmpvl kvvltqankl gv
//
LOCUS       XP_041324244            1282 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324244
VERSION     XP_041324244.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468310.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1282
                     /product="protein transport protein Sec31A isoform X1"
                     /calculated_mol_wt=138820
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <756..1153
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1282
                     /gene="SEC31A"
                     /coded_by="XM_041468310.1:69..3917"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqtyqatqq ysgtggpaly qpqqpiaapa sasypspapn ttpsylpsap
      961 ahsmpsplyp gqpqpsptsl npissfpvpp sgtsfqhgrp glpatsvaya lptgptgtlp
     1021 atsdlpasqr teslpsqdqa spftgelgpq ngwndpptln raakkkkvpd nflppvpits
     1081 pimnpladpq sqmqqpqapa vpssapsfqp phlpagqmqv lqggfqpaaq plgpstmapt
     1141 vskpstegap gapignaiqh vqalptekit kkpipeehli lkttfealiq rcllsasdpq
     1201 tkrklddank rleflydklr eqtlsptiis glhnivksie trnyqeglni hthivstsnf
     1261 setsafmpvl kvvltqankl gv
//
LOCUS       XP_041324245            1279 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324245
VERSION     XP_041324245.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468311.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1279
                     /product="protein transport protein Sec31A isoform X2"
                     /calculated_mol_wt=138521
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <756..1147
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1279
                     /gene="SEC31A"
                     /coded_by="XM_041468311.1:83..3922"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqtyqatqq ysgtggpaly qpqqpiaapa sasypspapn ttpsylpsap
      961 ahsmpsplyp gqpqpsptsl npissfpvpp sgtsfqhgrp glpatsvaya lptgptgtlp
     1021 atsdlpasqr teslpsqdqa spftgpqngw ndpptlnraa kkkkvpdnfl ppvpitspim
     1081 npladpqsqm qqpqapavps sapsfqpphl pagqmqvlqg gfqpaaqplg pstmaptvsk
     1141 pstegapgap ignaiqhvqa lptekitkkp ipeehlilkt tfealiqrcl lsasdpqtkr
     1201 klddankrle flydklreqt lsptiisglh nivksietrn yqeglnihth ivstsnfset
     1261 safmpvlkvv ltqanklgv
//
LOCUS       XP_041324246            1267 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324246
VERSION     XP_041324246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1267
                     /product="protein transport protein Sec31A isoform X3"
                     /calculated_mol_wt=137323
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <793..1138
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1267
                     /gene="SEC31A"
                     /coded_by="XM_041468312.1:83..3886"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqtyqatqq ysgtggpaly qpqqpiaapa sasypspapn ttpsylpsap
      961 ahsmpsplyp gqpqpsptsl npissfpvpp sgtsfqhgrp glpatsvaya lptgpteslp
     1021 sqdqaspftg elgpqngwnd pptlnraakk kkvpdnflpp vpitspimnp ladpqsqmqq
     1081 pqapavpssa psfqpphlpa gqmqvlqggf qpaaqplgps tmaptvskps tegapgapig
     1141 naiqhvqalp tekitkkpip eehlilkttf ealiqrclls asdpqtkrkl ddankrlefl
     1201 ydklreqtls ptiisglhni vksietrnyq eglnihthiv stsnfsetsa fmpvlkvvlt
     1261 qanklgv
//
LOCUS       XP_041324247            1266 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324247
VERSION     XP_041324247.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468313.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1266
                     /product="protein transport protein Sec31A isoform X4"
                     /calculated_mol_wt=137132
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <756..1137
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1266
                     /gene="SEC31A"
                     /coded_by="XM_041468313.1:83..3883"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqtyqatqq ysgtggpaly qpqqpiaapa sasypspapn ttpsylpsap
      961 ahsmpsplyp gqpqpsptsl npissfpvpp sgtsfqhgrp glpatsvaya lptgptgtlp
     1021 atsdlpasqr tgpqngwndp ptlnraakkk kvpdnflppv pitspimnpl adpqsqmqqp
     1081 qapavpssap sfqpphlpag qmqvlqggfq paaqplgpst maptvskpst egapgapign
     1141 aiqhvqalpt ekitkkpipe ehlilkttfe aliqrcllsa sdpqtkrkld dankrlefly
     1201 dklreqtlsp tiisglhniv ksietrnyqe glnihthivs tsnfsetsaf mpvlkvvltq
     1261 anklgv
//
LOCUS       XP_041324248            1264 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324248
VERSION     XP_041324248.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468314.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1264
                     /product="protein transport protein Sec31A isoform X5"
                     /calculated_mol_wt=137024
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <793..1135
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1264
                     /gene="SEC31A"
                     /coded_by="XM_041468314.1:83..3877"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqtyqatqq ysgtggpaly qpqqpiaapa sasypspapn ttpsylpsap
      961 ahsmpsplyp gqpqpsptsl npissfpvpp sgtsfqhgrp glpatsvaya lptgpteslp
     1021 sqdqaspftg pqngwndppt lnraakkkkv pdnflppvpi tspimnplad pqsqmqqpqa
     1081 pavpssapsf qpphlpagqm qvlqggfqpa aqplgpstma ptvskpsteg apgapignai
     1141 qhvqalptek itkkpipeeh lilkttfeal iqrcllsasd pqtkrkldda nkrleflydk
     1201 lreqtlspti isglhnivks ietrnyqegl nihthivsts nfsetsafmp vlkvvltqan
     1261 klgv
//
LOCUS       XP_041324249            1251 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324249
VERSION     XP_041324249.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468315.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1251
                     /product="protein transport protein Sec31A isoform X6"
                     /calculated_mol_wt=135590
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <756..1119
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1251
                     /gene="SEC31A"
                     /coded_by="XM_041468315.1:83..3838"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqg
      841 enppppgfim pgavgpsmpp qqatssnysm ysqagarpay pqtyqatqqy sgtggpalyq
      901 pqqpiaapas asypspapnt tpsylpsapa hsmpsplypg qpqpsptsln pissfpvpps
      961 gtsfqhgrpg lpatsvayal ptgptgtlpa tsdlpasqrt eslpsqdqas pftgelgpqn
     1021 gwndpptlnr aakkkkvpdn flppvpitsp imnpladpqs qmqqpqapav pssapsfqpp
     1081 hlpagqmqvl qggfqpaaqp lgpstmaptv skpstegapg apignaiqhv qalptekitk
     1141 kpipeehlil kttfealiqr cllsasdpqt krklddankr leflydklre qtlsptiisg
     1201 lhnivksiet rnyqeglnih thivstsnfs etsafmpvlk vvltqanklg v
//
LOCUS       XP_041324250            1251 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324250
VERSION     XP_041324250.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468316.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1251
                     /product="protein transport protein Sec31A isoform X7"
                     /calculated_mol_wt=135636
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <756..1122
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1251
                     /gene="SEC31A"
                     /coded_by="XM_041468316.1:83..3838"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqtyqatqq ysgtggpaly qpqqpiaapa sasypspapn ttpsylpsap
      961 ahsmpsplyp gqpqpsptsl npissfpvpp sgtsfqhgrp glpatsvaya lptgptgpqn
     1021 gwndpptlnr aakkkkvpdn flppvpitsp imnpladpqs qmqqpqapav pssapsfqpp
     1081 hlpagqmqvl qggfqpaaqp lgpstmaptv skpstegapg apignaiqhv qalptekitk
     1141 kpipeehlil kttfealiqr cllsasdpqt krklddankr leflydklre qtlsptiisg
     1201 lhnivksiet rnyqeglnih thivstsnfs etsafmpvlk vvltqanklg v
//
LOCUS       XP_041324251            1235 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324251
VERSION     XP_041324251.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468317.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1235
                     /product="protein transport protein Sec31A isoform X8"
                     /calculated_mol_wt=133903
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <843..1106
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1235
                     /gene="SEC31A"
                     /coded_by="XM_041468317.1:83..3790"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqg
      841 enppppgfim pgavgpsmpp qqatssnysm ysqagarpay pqtyqatqqy sgtggpalyq
      901 pqqpiaapas asypspapnt tpsylpsapa hsmpsplypg qpqpsptsln pissfpvpps
      961 gtsfqhgrpg lpatsvayal ptgptgtlpa tsdlpasqrt gpqngwndpp tlnraakkkk
     1021 vpdnflppvp itspimnpla dpqsqmqqpq apavpssaps fqpphlpagq mqvlqggfqp
     1081 aaqplgpstm aptvskpste gapgapigna iqhvqalpte kitkkpipee hlilkttfea
     1141 liqrcllsas dpqtkrkldd ankrleflyd klreqtlspt iisglhnivk sietrnyqeg
     1201 lnihthivst snfsetsafm pvlkvvltqa nklgv
//
LOCUS       XP_041324252            1220 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X9 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324252
VERSION     XP_041324252.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468318.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1220
                     /product="protein transport protein Sec31A isoform X9"
                     /calculated_mol_wt=132406
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <843..1091
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1220
                     /gene="SEC31A"
                     /coded_by="XM_041468318.1:83..3745"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqg
      841 enppppgfim pgavgpsmpp qqatssnysm ysqagarpay pqtyqatqqy sgtggpalyq
      901 pqqpiaapas asypspapnt tpsylpsapa hsmpsplypg qpqpsptsln pissfpvpps
      961 gtsfqhgrpg lpatsvayal ptgptgpqng wndpptlnra akkkkvpdnf lppvpitspi
     1021 mnpladpqsq mqqpqapavp ssapsfqpph lpagqmqvlq ggfqpaaqpl gpstmaptvs
     1081 kpstegapga pignaiqhvq alptekitkk pipeehlilk ttfealiqrc llsasdpqtk
     1141 rklddankrl eflydklreq tlsptiisgl hnivksietr nyqeglniht hivstsnfse
     1201 tsafmpvlkv vltqanklgv
//
LOCUS       XP_041324253            1148 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324253
VERSION     XP_041324253.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468319.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1148
                     /product="protein transport protein Sec31A isoform X10"
                     /calculated_mol_wt=125294
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <852..>1026
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1148
                     /gene="SEC31A"
                     /coded_by="XM_041468319.1:83..3529"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqv
      841 riaptvttws nktptalpsh lpagcpsdtq genppppgfi mpgavgpsmp pqqatssnys
      901 mysqagarpa ypqrpqngwn dpptlnraak kkkvpdnflp pvpitspimn pladpqsqmq
      961 qpqapavpss apsfqpphlp agqmqvlqgg fqpaaqplgp stmaptvskp stegapgapi
     1021 gnaiqhvqal ptekitkkpi peehlilktt fealiqrcll sasdpqtkrk lddankrlef
     1081 lydklreqtl sptiisglhn ivksietrny qeglnihthi vstsnfsets afmpvlkvvl
     1141 tqanklgv
//
LOCUS       XP_041324254            1117 aa            linear   VRT 06-MAY-2021
DEFINITION  protein transport protein Sec31A isoform X11 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324254
VERSION     XP_041324254.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468320.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1117
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1117
                     /product="protein transport protein Sec31A isoform X11"
                     /calculated_mol_wt=122064
     Region          13..65
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          70..119
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          121..337
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          125..162
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          172..208
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          214..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          263..302
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          306..331
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <578..>701
                     /region_name="ACE1-Sec16-like"
                     /note="Ancestral coatomer element 1 (ACE1) of COPII coat
                     complex assembly protein Sec16; cl14807"
                     /db_xref="CDD:449359"
     Region          <843..1010
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1117
                     /gene="SEC31A"
                     /coded_by="XM_041468320.1:83..3436"
                     /db_xref="GeneID:121354018"
ORIGIN      
        1 mklkevdrta mqawspaqqh piylatgtsa qqldatfsts asleifeldl adpsldmksc
       61 atfssshryh kliwgphsmt sgdrvsgvli aggengnvil ydsakiidge aeviiaqkdk
      121 htgpvraldv nmfqtnlvas ganeseiyiw dlnnfatpmt pgvktqpled isciawnrqv
      181 qhilasasps gratvwdlrk nepiikvsdh nnrmhcsgla whpevatqmv laseddrlpv
      241 iqmwdlrfas splrvlesht rgilaiawsm adpelllscg kdakilcsnp ntgevlyelp
      301 tntqwcfdiq wcprnpavls aasfdgrisv ysimggsadg lrqkqvdqls ssfgnldpfg
      361 tgqplpplql pqqtapqsvv mplkkppkwi rrpmgasfsf ggklvtfens kppqqagmeq
      421 qqqqhphvyv sqvvtekefl arsnqlqeav qsqgfvsycq kkidmaladf ernvwaflkv
      481 nfeedsrvry lellgykkdd lrkkitsaln kegladgalg espaesdgsv pnegdegqtt
      541 eeqflgetlk ehkketedvg sakttfnisv sgdvdglitq alltgnfesa vdlclhdnrm
      601 adaiilaiag gqellsrtqe kyfakmrski trlitavvtk nwkeivqscd lqnwrealaa
      661 vltyarpdef talcdllgsr lenegdsilq tqaclcyica gnvdklvacw tkvqdgnspl
      721 slqdliekvv ilrkavqltq avdpntmgal laekmsqyan llaaqgslaa altflpantn
      781 qpnivqlrdr lcraqgelpa gqdglkapye rdpmpkgrad pgagrmqapq apaqqyyqqg
      841 enppppgfim pgavgpsmpp qqatssnysm ysqagarpay pqrpqngwnd pptlnraakk
      901 kkvpdnflpp vpitspimnp ladpqsqmqq pqapavpssa psfqpphlpa gqmqvlqggf
      961 qpaaqplgps tmaptvskps tegapgapig naiqhvqalp tekitkkpip eehlilkttf
     1021 ealiqrclls asdpqtkrkl ddankrlefl ydklreqtls ptiisglhni vksietrnyq
     1081 eglnihthiv stsnfsetsa fmpvlkvvlt qanklgv
//
LOCUS       XP_041324255             772 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-dependent protein kinase 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324255
VERSION     XP_041324255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468321.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="cGMP-dependent protein kinase 2 isoform X1"
                     /calculated_mol_wt=87993
     Region          179..288
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(243..244,253..255)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(275..277,281..283)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          297..412
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(367..368,377..379)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(400..402,406..408)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          469..727
                     /region_name="STKc_cGK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     cGMP-dependent protein kinase (cGK or PKG); cd05572"
                     /db_xref="CDD:270724"
     Site            order(469..473,477,490,492,524,540..541,543,547,549,586,
                     588,590..591,593,603..604,607,620..625,652,658,661)
                     /site_type="active"
                     /db_xref="CDD:270724"
     Site            order(469..473,477,490,492,524,541..543,547,586,588,
                     590..591,593,603..604)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270724"
     Site            order(473,547,549,586,588,590,607,620..625,652,658,661)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270724"
     Site            order(603..613,617..625)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270724"
     CDS             1..772
                     /gene="PRKG2"
                     /coded_by="XM_041468321.1:1..2319"
                     /db_xref="GeneID:121354020"
ORIGIN      
        1 mgnglvkpkh lrqpnrhvan laigcaashk flmdpclsin vingqadvlc skvlelekel
       61 krkdqqlqes rshvaelqeq lamqtkviae ltkelqskci qlnklqdvvs tqgehslqps
      121 pfkvsadrrr gakegvsaep ttqlcdlsrq tifslekatv rkdssekkli tdalnknqfl
      181 krlephqtrd mvecmyertf qqgsyiirqg epgnhifvlk egslevfqqn kllssipvwt
      241 afgelailyn ctrtasvkai tnvktwaldr evfqnimrvt aqtrqeqyrn flrsvsllkn
      301 lpedkltkim dcleveyydk gdyviregee gntffiiakg kvivtqsttd hsqpqvikyl
      361 hkgdyfgeka lvsddvrsan iiadeynvec lvidretfnq tvgtyeelqt ylegyvanla
      421 qadekrhakg rsfcgqltke vslemielke kvaqfppspf qnlevvttlg vggfgrvelv
      481 kvknenmafa mkcikkkhvv dtkqqehiys ekkileqics pfvvklyrtf kdnkyvymll
      541 eaclggelws llrdrgsfde fttkfcvgcv teafdylhqi giiyrdlkpe nlildaegyi
      601 klvdfgfakk igsgqktwtf cgtpeyvape vilskghdfs vdfwslgilv yelltgsppf
      661 sgadqmmtyn lilkgiekld fpkvitrrpe dlirrlcrqn pterlgnlrn gindikkhrw
      721 lcgfnwdslk vrkltsplkr elsgptdysy fdsyppevgs ppdelsgwdk df
//
LOCUS       XP_041324256             751 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-dependent protein kinase 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324256
VERSION     XP_041324256.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468322.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..751
                     /product="cGMP-dependent protein kinase 2 isoform X2"
                     /calculated_mol_wt=85766
     Region          158..267
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(222..223,232..234)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(254..256,260..262)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          276..391
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(346..347,356..358)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(379..381,385..387)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          448..706
                     /region_name="STKc_cGK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     cGMP-dependent protein kinase (cGK or PKG); cd05572"
                     /db_xref="CDD:270724"
     Site            order(448..452,456,469,471,503,519..520,522,526,528,565,
                     567,569..570,572,582..583,586,599..604,631,637,640)
                     /site_type="active"
                     /db_xref="CDD:270724"
     Site            order(448..452,456,469,471,503,520..522,526,565,567,
                     569..570,572,582..583)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270724"
     Site            order(452,526,528,565,567,569,586,599..604,631,637,640)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270724"
     Site            order(582..592,596..604)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270724"
     CDS             1..751
                     /gene="PRKG2"
                     /coded_by="XM_041468322.1:1..2256"
                     /db_xref="GeneID:121354020"
ORIGIN      
        1 mgnglvkpkh lrqpnrhvan laigsdvlcs kvlelekelk rkdqqlqesr shvaelqeql
       61 amqtkviael tkelqskciq lnklqdvvst qgehslqpsp fkvsadrrrg akegvsaept
      121 tqlcdlsrqt ifslekatvr kdssekklit dalnknqflk rlephqtrdm vecmyertfq
      181 qgsyiirqge pgnhifvlke gslevfqqnk llssipvwta fgelailync trtasvkait
      241 nvktwaldre vfqnimrvta qtrqeqyrnf lrsvsllknl pedkltkimd cleveyydkg
      301 dyviregeeg ntffiiakgk vivtqsttdh sqpqvikylh kgdyfgekal vsddvrsani
      361 iadeynvecl vidretfnqt vgtyeelqty legyvanlaq adekrhakgr sfcgqltkev
      421 slemielkek vaqfppspfq nlevvttlgv ggfgrvelvk vknenmafam kcikkkhvvd
      481 tkqqehiyse kkileqicsp fvvklyrtfk dnkyvymlle aclggelwsl lrdrgsfdef
      541 ttkfcvgcvt eafdylhqig iiyrdlkpen lildaegyik lvdfgfakki gsgqktwtfc
      601 gtpeyvapev ilskghdfsv dfwslgilvy elltgsppfs gadqmmtynl ilkgiekldf
      661 pkvitrrped lirrlcrqnp terlgnlrng indikkhrwl cgfnwdslkv rkltsplkre
      721 lsgptdysyf dsyppevgsp pdelsgwdkd f
//
LOCUS       XP_041324257             723 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-dependent protein kinase 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324257
VERSION     XP_041324257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468323.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..723
                     /product="cGMP-dependent protein kinase 2 isoform X3"
                     /calculated_mol_wt=82824
     Region          158..267
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(222..223,232..234)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(254..256,260..262)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          276..391
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(346..347,356..358)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(379..381,385..387)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          429..678
                     /region_name="STKc_cGK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     cGMP-dependent protein kinase (cGK or PKG); cd05572"
                     /db_xref="CDD:270724"
     Site            order(441,443,475,491..492,494,498,500,537,539,541..542,
                     544,554..555,558,571..576,603,609,612)
                     /site_type="active"
                     /db_xref="CDD:270724"
     Site            order(498,500,537,539,541,558,571..576,603,609,612)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270724"
     Site            order(554..564,568..576)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270724"
     Region          674..723
                     /region_name="S_TK_X"
                     /note="Extension to Ser/Thr-type protein kinases;
                     smart00133"
                     /db_xref="CDD:214529"
     CDS             1..723
                     /gene="PRKG2"
                     /coded_by="XM_041468323.1:1..2172"
                     /db_xref="GeneID:121354020"
ORIGIN      
        1 mgnglvkpkh lrqpnrhvan laigsdvlcs kvlelekelk rkdqqlqesr shvaelqeql
       61 amqtkviael tkelqskciq lnklqdvvst qgehslqpsp fkvsadrrrg akegvsaept
      121 tqlcdlsrqt ifslekatvr kdssekklit dalnknqflk rlephqtrdm vecmyertfq
      181 qgsyiirqge pgnhifvlke gslevfqqnk llssipvwta fgelailync trtasvkait
      241 nvktwaldre vfqnimrvta qtrqeqyrnf lrsvsllknl pedkltkimd cleveyydkg
      301 dyviregeeg ntffiiakgk vivtqsttdh sqpqvikylh kgdyfgekal vsddvrsani
      361 iadeynvecl vidretfnqt vgtyeelqty legyvanlaq adekrhakgr sfcgqltkev
      421 slemielkek vkvknenmaf amkcikkkhv vdtkqqehiy sekkileqic spfvvklyrt
      481 fkdnkyvyml leaclggelw sllrdrgsfd efttkfcvgc vteafdylhq igiiyrdlkp
      541 enlildaegy iklvdfgfak kigsgqktwt fcgtpeyvap evilskghdf svdfwslgil
      601 vyelltgspp fsgadqmmty nlilkgiekl dfpkvitrrp edlirrlcrq npterlgnlr
      661 ngindikkhr wlcgfnwdsl kvrkltsplk relsgptdys yfdsyppevg sppdelsgwd
      721 kdf
//
LOCUS       XP_041324258             473 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-GEF domain-containing family member 1B [Pyrgilauda ruficollis].
ACCESSION   XP_041324258
VERSION     XP_041324258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468324.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="ras-GEF domain-containing family member 1B"
                     /calculated_mol_wt=55290
     Region          42..164
                     /region_name="REM"
                     /note="Guanine nucleotide exchange factor for Ras-like
                     GTPases; N-terminal domain (RasGef_N), also called REM
                     domain (Ras exchanger motif). This domain is common in
                     nucleotide exchange factors for Ras-like small GTPases and
                     is typically found immediately...; cd06224"
                     /db_xref="CDD:100121"
     Site            order(53,104,108..109,112,115..116,155..156,159)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:100121"
     Region          208..403
                     /region_name="RasGEF"
                     /note="RasGEF domain; pfam00617"
                     /db_xref="CDD:459872"
     Site            order(234,243..244,255..256,258..260,262..263,266..267,
                     270,303,306..307,309..311,313..316,318..319,336,339,
                     344..346,349,373..375,378..380,382..384,386..389,404,408,
                     441,444..445)
                     /site_type="other"
                     /note="Ras interaction site [polypeptide binding]"
                     /db_xref="CDD:238087"
     CDS             1..473
                     /gene="RASGEF1B"
                     /coded_by="XM_041468324.1:171..1592"
                     /db_xref="GeneID:121354022"
ORIGIN      
        1 mpqtppfaam fdsssynrnl yqtkedncgg lyyhnnnlls gslealiqhl vpnvdyypdr
       61 tyiftfllss rlflhpyelm akvcqlcteq qrlrepaldk nwiqkiapki lqlltewtet
      121 fpydfrderm mrnlkelaqr iasgdemyrk nvqqllqnli rklaavtqye evlakidatt
      181 stdrltllkt kpqsmqrdii tvcndpyvla qqlthieler lnyigpeefi qafvqkdpln
      241 ndkscygdgk ktrnleayve wfnrlsylva teicmpvkkk hrarvieyfi dvarecfnig
      301 nfnslmaiis gmnmspvsrl kktwakvkta kfdilehqmd pssnfynyrt alrgatqrsl
      361 tahssrekiv ipffsllikd iyflnegsan rlpnghinfe kfwelakqvs efmtwkqvec
      421 pferdwkilq yllsvpvfsd dalylasyes egpenhiekd rwktlrstll grv
//
LOCUS       XP_041324259             357 aa            linear   VRT 06-MAY-2021
DEFINITION  stearoyl-CoA desaturase 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324259
VERSION     XP_041324259.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468325.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="stearoyl-CoA desaturase 5"
                     /calculated_mol_wt=40422
     Region          98..338
                     /region_name="Delta9-FADS-like"
                     /note="The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like
                     CD includes the delta-9 and delta-11 acyl CoA desaturases
                     found in various eukaryotes including vertebrates,
                     insects, higher plants, and fungi. The delta-9 acyl-lipid
                     desaturases are found in a wide...; cd03505"
                     /db_xref="CDD:239582"
     Site            order(121,126,158,161..162,299,302..303)
                     /site_type="other"
                     /note="Di-iron ligands [ion binding]"
                     /db_xref="CDD:239582"
     CDS             1..357
                     /gene="SCD5"
                     /coded_by="XM_041468325.1:1..1074"
                     /db_xref="GeneID:121354023"
ORIGIN      
        1 mcslglctsl lpgsisisst lnpdipalnt qgilpvvcra paasftwvar psrisphwsl
       61 clgqpgsggs aivwrnvvlm gllhlgavya lslvprahil tllwayfcfl mtalgvtaga
      121 hrlwshrsyk aklplrifla aansmafqnd iyewsrdhrv hhkysetdad phnarrgfff
      181 shigwlfvrk hrdviekgrk ldftdllddp vvrfqrkyyk ssvvlmcfvi ptvvpwylwg
      241 eslwnayfla silrytisln vtwlvnsaah mygnrpydkn inprqntlvt lgaigegfhn
      301 yhhtfpfdys aselglkfnp ttwfidfmfw lglvtdrkqa pkemiqarke rtgdgsa
//
LOCUS       XP_041324261             876 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA transposase THAP9 [Pyrgilauda ruficollis].
ACCESSION   XP_041324261
VERSION     XP_041324261.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468327.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..876
                     /product="DNA transposase THAP9"
                     /calculated_mol_wt=96765
     Region          5..89
                     /region_name="THAP"
                     /note="THAP domain; pfam05485"
                     /db_xref="CDD:461662"
     Region          168..380
                     /region_name="Tnp_P_element"
                     /note="Transposase protein; pfam12017"
                     /db_xref="CDD:288840"
     CDS             1..876
                     /gene="THAP9"
                     /coded_by="XM_041468327.1:19..2649"
                     /db_xref="GeneID:121354024"
ORIGIN      
        1 mtrscsalgc tardtgrsre rgisfhqfpv daaqrrewir avnrvdprsr rawrpgpgai
       61 lcsrhfaegd feryglrrkl rrgavpsrfl pseppgagrr rsrtpgralk qplpsppagd
      121 hnyslqgqra agpapgaprl qqqppaagrc gptprrrsvp silrelaekr qlseeivsll
      181 qaqfsdlpre lhswrqmady spemrqfacl lhlyhikayd ylrkilplph pysltnwlsn
      241 neaaagfssd iflwlqekve redqacryca vlvqdvslqk qqewdpqskq ltgfvdlgag
      301 vldadeapla seaiilmavg isspwtaplg yflvnstsgr flaqllrqai hklnsvgivv
      361 lavtsgasar gaetaralgi ridpkriqct fqhppgsahs iayffdvrha lllirnalqc
      421 fqkvewlgdt mwwqhvvela tlgeqkvlel cspesgrags kgsyhlkvnl atllfsegva
      481 ealehlqklg lasfqncsgt vkfvrlmssl cnvfygrgpf gkepllagny tkisnlfdea
      541 rscfvnltds vgrciikskr klgflsflln aeslkwlssn htclkgtpsh hlhtrafsld
      601 pleqfvralq qacgssgspt cavfqaayhk llascslasg sppssgtasp wdvslsqrra
      661 vtlgsiraqy hpapgrtlap ehpystglll ptsalsnalt dlslyaqslt ctagwvaeql
      721 aldlqceacl aslfeadesr lrsrsvlyvk klggvslpsa svhhitsise qvlnrygkvg
      781 gankntklwh lcleqkvfqe llgesplfpt ltkhlfegem sinnhytvlv keitrcylnv
      841 rtrpaqhlnl kypcgkhklk rlkgkhlfpp plgsyq
//
LOCUS       XP_041324262             806 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-54 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324262
VERSION     XP_041324262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468328.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="protein lin-54 homolog isoform X1"
                     /calculated_mol_wt=84477
     Region          579..>602
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          653..688
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..806
                     /gene="LIN54"
                     /coded_by="XM_041468328.1:175..2595"
                     /db_xref="GeneID:121354025"
ORIGIN      
        1 mevvsaevns llpeeimdtg itlveddsie avivsspmgg esipmetele eivnisttsd
       61 ssatttatvt tesvpapssh tgdaalttta pspdvnaavk pafpgglhkl gaqtpvtisa
      121 nqiilnkatd ikigsqsikp dgqklivttl gksgqpivla lphsqlpqsq kavsqaqggd
      181 skvqgqqikv viggrsevkp vvgvsaltqg sqlintaaqp svlqsqqvkt vqiakktrtp
      241 tsgpvitkli fakpinskav tgqttqvspv isgrvfsqsa pgtppktiti sesgvigssl
      301 stttqqtpnk iaisplkspn kqltvvsvas qppnspqktv gvplnvalgq qiltvqqsap
      361 sspgkaivnh tttqavksav qtitvggmgt sqfktiipla tapnvqqiqv pgskfhyvrl
      421 vtattassst qsasqnpstn tqplqqakpv vvnatpvrms vpivpaqtvk qvvpkpinst
      481 sqivttsqpq qrlimpatpl pqiqpnltnl ppgtvlapap gtgnvgyavl paqyvtqlqq
      541 ssyvsiasnt gftgtssvqs qarlpfngii ssesanrprk pcnctkslcl klycdcfang
      601 efcnncnctn cynnldhend rqkaikacld rnpeafkpki gkgkegesdr rhskgcnckr
      661 sgclknycec yeakimcssi ckcigcknfe esperktlmh ladaaevrvq qqtaaktkls
      721 sqisdlltrp tpalssgggk lpftfvtkev adatceclla qaeqaektgk skaaaermil
      781 eefgrclmrv issagkskgd pcamnc
//
LOCUS       XP_041324263             806 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-54 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324263
VERSION     XP_041324263.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468329.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="protein lin-54 homolog isoform X1"
                     /calculated_mol_wt=84477
     Region          579..>602
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          653..688
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..806
                     /gene="LIN54"
                     /coded_by="XM_041468329.1:121..2541"
                     /db_xref="GeneID:121354025"
ORIGIN      
        1 mevvsaevns llpeeimdtg itlveddsie avivsspmgg esipmetele eivnisttsd
       61 ssatttatvt tesvpapssh tgdaalttta pspdvnaavk pafpgglhkl gaqtpvtisa
      121 nqiilnkatd ikigsqsikp dgqklivttl gksgqpivla lphsqlpqsq kavsqaqggd
      181 skvqgqqikv viggrsevkp vvgvsaltqg sqlintaaqp svlqsqqvkt vqiakktrtp
      241 tsgpvitkli fakpinskav tgqttqvspv isgrvfsqsa pgtppktiti sesgvigssl
      301 stttqqtpnk iaisplkspn kqltvvsvas qppnspqktv gvplnvalgq qiltvqqsap
      361 sspgkaivnh tttqavksav qtitvggmgt sqfktiipla tapnvqqiqv pgskfhyvrl
      421 vtattassst qsasqnpstn tqplqqakpv vvnatpvrms vpivpaqtvk qvvpkpinst
      481 sqivttsqpq qrlimpatpl pqiqpnltnl ppgtvlapap gtgnvgyavl paqyvtqlqq
      541 ssyvsiasnt gftgtssvqs qarlpfngii ssesanrprk pcnctkslcl klycdcfang
      601 efcnncnctn cynnldhend rqkaikacld rnpeafkpki gkgkegesdr rhskgcnckr
      661 sgclknycec yeakimcssi ckcigcknfe esperktlmh ladaaevrvq qqtaaktkls
      721 sqisdlltrp tpalssgggk lpftfvtkev adatceclla qaeqaektgk skaaaermil
      781 eefgrclmrv issagkskgd pcamnc
//
LOCUS       XP_041324264             806 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-54 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324264
VERSION     XP_041324264.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468330.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="protein lin-54 homolog isoform X1"
                     /calculated_mol_wt=84477
     Region          579..>602
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          653..688
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..806
                     /gene="LIN54"
                     /coded_by="XM_041468330.1:162..2582"
                     /db_xref="GeneID:121354025"
ORIGIN      
        1 mevvsaevns llpeeimdtg itlveddsie avivsspmgg esipmetele eivnisttsd
       61 ssatttatvt tesvpapssh tgdaalttta pspdvnaavk pafpgglhkl gaqtpvtisa
      121 nqiilnkatd ikigsqsikp dgqklivttl gksgqpivla lphsqlpqsq kavsqaqggd
      181 skvqgqqikv viggrsevkp vvgvsaltqg sqlintaaqp svlqsqqvkt vqiakktrtp
      241 tsgpvitkli fakpinskav tgqttqvspv isgrvfsqsa pgtppktiti sesgvigssl
      301 stttqqtpnk iaisplkspn kqltvvsvas qppnspqktv gvplnvalgq qiltvqqsap
      361 sspgkaivnh tttqavksav qtitvggmgt sqfktiipla tapnvqqiqv pgskfhyvrl
      421 vtattassst qsasqnpstn tqplqqakpv vvnatpvrms vpivpaqtvk qvvpkpinst
      481 sqivttsqpq qrlimpatpl pqiqpnltnl ppgtvlapap gtgnvgyavl paqyvtqlqq
      541 ssyvsiasnt gftgtssvqs qarlpfngii ssesanrprk pcnctkslcl klycdcfang
      601 efcnncnctn cynnldhend rqkaikacld rnpeafkpki gkgkegesdr rhskgcnckr
      661 sgclknycec yeakimcssi ckcigcknfe esperktlmh ladaaevrvq qqtaaktkls
      721 sqisdlltrp tpalssgggk lpftfvtkev adatceclla qaeqaektgk skaaaermil
      781 eefgrclmrv issagkskgd pcamnc
//
LOCUS       XP_041324265             805 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-54 homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324265
VERSION     XP_041324265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..805
                     /product="protein lin-54 homolog isoform X2"
                     /calculated_mol_wt=84349
     Region          578..>601
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          652..687
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..805
                     /gene="LIN54"
                     /coded_by="XM_041468331.1:175..2592"
                     /db_xref="GeneID:121354025"
ORIGIN      
        1 mevvsaevns llpeeimdtg itlveddsie avivsspmgg esipmetele eivnisttsd
       61 ssatttatvt tesvpapssh tgdaalttta pspdvnaavk pafpgglhkl gaqtpvtisa
      121 nqiilnkatd ikigsqsikp dgqklivttl gksgqpivla lphsqlpqsq kavsqaqggd
      181 skvqgqqikv viggrsevkp vvgvsaltqg sqlintaaqp svlqsqqvkt vqiakktrtp
      241 tsgpvitkli fakpinskav tgqttqvspv isgrvfsqsa pgtppktiti sesgvigssl
      301 stttqqtpnk iaisplkspn kltvvsvasq ppnspqktvg vplnvalgqq iltvqqsaps
      361 spgkaivnht ttqavksavq titvggmgts qfktiiplat apnvqqiqvp gskfhyvrlv
      421 tattassstq sasqnpstnt qplqqakpvv vnatpvrmsv pivpaqtvkq vvpkpinsts
      481 qivttsqpqq rlimpatplp qiqpnltnlp pgtvlapapg tgnvgyavlp aqyvtqlqqs
      541 syvsiasntg ftgtssvqsq arlpfngiis sesanrprkp cnctkslclk lycdcfange
      601 fcnncnctnc ynnldhendr qkaikacldr npeafkpkig kgkegesdrr hskgcnckrs
      661 gclknycecy eakimcssic kcigcknfee sperktlmhl adaaevrvqq qtaaktklss
      721 qisdlltrpt palssgggkl pftfvtkeva datcecllaq aeqaektgks kaaaermile
      781 efgrclmrvi ssagkskgdp camnc
//
LOCUS       XP_041324266             753 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-54 homolog isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324266
VERSION     XP_041324266.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468332.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="protein lin-54 homolog isoform X3"
                     /calculated_mol_wt=79077
     Region          77..>470
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     Region          526..>549
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          600..635
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..753
                     /gene="LIN54"
                     /coded_by="XM_041468332.1:175..2436"
                     /db_xref="GeneID:121354025"
ORIGIN      
        1 mevvsaevns llpeeimdtg itlveddsie avivsspmgg esipmetele eivnisttsd
       61 ssatttatvt tesvpapssh tgdaalttta pspdvnaavk pafpgglhkl gaqtpvtisa
      121 nqiilnkatd ikigsqsikp dgqklivttl gksgqpivla lphsqlpqsq kavsqaqggd
      181 skvqgqqikv viggrsevkp vvgvsaltqg sqlintaaqp svlqsqqvkt vqiakktrtp
      241 tsgpvitkli fakpinskav tgqttqvspv isgrvfsqsa pgtppktiti sesgvigssl
      301 stttqqtpnk iaisplkspn kavksavqti tvggmgtsqf ktiiplatap nvqqiqvpgs
      361 kfhyvrlvta ttassstqsa sqnpstntqp lqqakpvvvn atpvrmsvpi vpaqtvkqvv
      421 pkpinstsqi vttsqpqqrl impatplpqi qpnltnlppg tvlapapgtg nvgyavlpaq
      481 yvtqlqqssy vsiasntgft gtssvqsqar lpfngiisse sanrprkpcn ctkslclkly
      541 cdcfangefc nncnctncyn nldhendrqk aikacldrnp eafkpkigkg kegesdrrhs
      601 kgcnckrsgc lknycecyea kimcssickc igcknfeesp erktlmhlad aaevrvqqqt
      661 aaktklssqi sdlltrptpa lssgggklpf tfvtkevada tcecllaqae qaektgkska
      721 aaermileef grclmrviss agkskgdpca mnc
//
LOCUS       XP_041324267             664 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lin-54 homolog isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324267
VERSION     XP_041324267.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468333.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..664
                     /product="protein lin-54 homolog isoform X4"
                     /calculated_mol_wt=69922
     Region          82..>381
                     /region_name="SP1-4_N"
                     /note="N-terminal domain of transcription factor
                     Specificity Proteins (SP) 1-4; cl41773"
                     /db_xref="CDD:425404"
     Region          437..>460
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     Region          511..546
                     /region_name="TCR"
                     /note="Tesmin/TSO1-like CXC domain, cysteine-rich domain;
                     pfam03638"
                     /db_xref="CDD:461001"
     CDS             1..664
                     /gene="LIN54"
                     /coded_by="XM_041468333.1:175..2169"
                     /db_xref="GeneID:121354025"
ORIGIN      
        1 mevvsaevns llpeeimdtg itlveddsie avivsspmgg esipmetele eivnisttsd
       61 ssatttatvt tesvpapssh tgdaalttta pspdvnaavk pafpgglhkl gaqtpvtisa
      121 nqiilnkatd ikigsqsikp dgqklivttl gksgqpivla lphsqlpqsq kavsqaqggd
      181 skvqgqqikv viggrsevkp vvgvsaltqg sqlintaaqp svlqsqqvkt vqavksavqt
      241 itvggmgtsq fktiiplata pnvqqiqvpg skfhyvrlvt attassstqs asqnpstntq
      301 plqqakpvvv natpvrmsvp ivpaqtvkqv vpkpinstsq ivttsqpqqr limpatplpq
      361 iqpnltnlpp gtvlapapgt gnvgyavlpa qyvtqlqqss yvsiasntgf tgtssvqsqa
      421 rlpfngiiss esanrprkpc nctkslclkl ycdcfangef cnncnctncy nnldhendrq
      481 kaikacldrn peafkpkigk gkegesdrrh skgcnckrsg clknycecye akimcssick
      541 cigcknfees perktlmhla daaevrvqqq taaktklssq isdlltrptp alssgggklp
      601 ftfvtkevad atcecllaqa eqaektgksk aaaermilee fgrclmrvis sagkskgdpc
      661 amnc
//
LOCUS       XP_041324268             407 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324268
VERSION     XP_041324268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..407
                     /product="COP9 signalosome complex subunit 4 isoform X1"
                     /calculated_mol_wt=46210
     Region          <72..378
                     /region_name="RPN5"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5071"
                     /db_xref="CDD:227403"
     Region          265..363
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     Region          366..407
                     /region_name="CSN4_RPN5_eIF3a"
                     /note="CSN4/RPN5/eIF3a helix turn helix domain; pfam18420"
                     /db_xref="CDD:375846"
     CDS             1..407
                     /gene="COPS4"
                     /coded_by="XM_041468334.1:220..1443"
                     /db_xref="GeneID:121354026"
ORIGIN      
        1 maagavrqel aqlmnssgsh kdlagkyrqi lekaiqlsgv eqlealkafv eamvnenvsl
       61 visrqlltdf cthlpslpds takeiyhftl ekiqprvisf eeqvasirqh lasiyekeed
      121 wrnaaqvlvg ipletgqkqy nvdykletyl kiarlyledd dpvqaeayin rasllqnest
      181 neqlqihykv cyarvldyrr kfieaaqryn elsyksivhe terlealkha lhctilasag
      241 qqrsrmlatl fkdercqqla aygilekmyl driirgnqlq efaamlmphq kattadgssi
      301 ldraviehnl lsasklynni tfeelgalle ipaakaekia sqmitegrmn gfidqidgiv
      361 hfetrealpt wdkqiqslcf qvnnllekis qtapewtaqa meaqmaq
//
LOCUS       XP_041324269             355 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324269
VERSION     XP_041324269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="COP9 signalosome complex subunit 4 isoform X2"
                     /calculated_mol_wt=40627
     Region          <20..326
                     /region_name="RPN5"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5071"
                     /db_xref="CDD:227403"
     Region          213..311
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     Region          314..355
                     /region_name="CSN4_RPN5_eIF3a"
                     /note="CSN4/RPN5/eIF3a helix turn helix domain; pfam18420"
                     /db_xref="CDD:375846"
     CDS             1..355
                     /gene="COPS4"
                     /coded_by="XM_041468335.1:217..1284"
                     /db_xref="GeneID:121354026"
ORIGIN      
        1 mvnenvslvi srqlltdfct hlpslpdsta keiyhftlek iqprvisfee qvasirqhla
       61 siyekeedwr naaqvlvgip letgqkqynv dykletylki arlyledddp vqaeayinra
      121 sllqnestne qlqihykvcy arvldyrrkf ieaaqrynel syksivhete rlealkhalh
      181 ctilasagqq rsrmlatlfk dercqqlaay gilekmyldr iirgnqlqef aamlmphqka
      241 ttadgssild raviehnlls asklynnitf eelgalleip aakaekiasq mitegrmngf
      301 idqidgivhf etrealptwd kqiqslcfqv nnllekisqt apewtaqame aqmaq
//
LOCUS       XP_041324270             350 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 4 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324270
VERSION     XP_041324270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="COP9 signalosome complex subunit 4 isoform X3"
                     /calculated_mol_wt=39627
     Region          <72..321
                     /region_name="RPN5"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5071"
                     /db_xref="CDD:227403"
     Region          222..306
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     Region          309..350
                     /region_name="CSN4_RPN5_eIF3a"
                     /note="CSN4/RPN5/eIF3a helix turn helix domain; pfam18420"
                     /db_xref="CDD:375846"
     CDS             1..350
                     /gene="COPS4"
                     /coded_by="XM_041468336.1:223..1275"
                     /db_xref="GeneID:121354026"
ORIGIN      
        1 maagavrqel aqlmnssgsh kdlagkyrqi lekaiqlsgv eqlealkafv eamvnenvsl
       61 visrqlltdf cthlpslpds takeiyhftl ekiqprvisf eeqvasirqh lasiyekeed
      121 wrnaaqvlvg ipletgqkqy nvdykletyl kiarlyledd dpvqaeayin rasllqnest
      181 neqlqihykv cyarvldyrr kfieaaqryn elsyksivhe terlealkha lhctilasag
      241 ssildravie hnllsaskly nnitfeelga lleipaakae kiasqmiteg rmngfidqid
      301 givhfetrea lptwdkqiqs lcfqvnnlle kisqtapewt aqameaqmaq
//
LOCUS       XP_041324271             181 aa            linear   VRT 06-MAY-2021
DEFINITION  erythroid transcription factor-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324271
VERSION     XP_041324271.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468337.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521118.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>181
                     /product="erythroid transcription factor-like"
     Region          46..90
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(47,50,68,71)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(56..57,59,68..78)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     Region          100..151
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(101,104,122,125)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(110..111,113,122..132,148,150..151)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..181
                     /gene="LOC121354028"
                     /coded_by="XM_041468337.1:16..>558"
                     /db_xref="GeneID:121354028"
ORIGIN      
        1 mictgpywss lvrtgpywsv lvyndlcwsv lvltgpywsl paearecvnc gatatplwrr
       61 dgtghylcna cglyhrlngh nrplirpkkr llvskragtv csncqtsttt lwrrsprgdp
      121 vcnacglyyk lhrvnrpltm rkdgiqtrnr kvsakgkkrr qgggagpggv petsvgpplp
      181 p
//
LOCUS       XP_041324272             111 aa            linear   VRT 06-MAY-2021
DEFINITION  U4/U6.U5 tri-snRNP-associated protein 1-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324272
VERSION     XP_041324272.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468338.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521129.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>111
                     /product="U4/U6.U5 tri-snRNP-associated protein 1-like"
     Region          22..>77
                     /region_name="SART-1"
                     /note="SART-1 family; pfam03343"
                     /db_xref="CDD:460888"
     CDS             1..111
                     /gene="LOC121354029"
                     /coded_by="XM_041468338.1:<1..>336"
                     /codon_start=3
                     /db_xref="GeneID:121354029"
ORIGIN      
        1 agtkeeplaa elinplalrq reeireklaa akekrllnqk lgkvktlgee epwlddaaaw
       61 iersralqre kelaekrvgr dpktpgdpkn sgntkiqksq kknpkpqgip k
//
LOCUS       XP_041324274             372 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein kinase Fer-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324274
VERSION     XP_041324274.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468340.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="tyrosine-protein kinase Fer-like"
                     /calculated_mol_wt=42402
     Region          116..366
                     /region_name="PTKc_Fer"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Fer; cd05085"
                     /db_xref="CDD:270668"
     Site            order(119..121,127,139,141,158,187..190,193..194,234,
                     238..239,241,251..252,269..274,276,316,320)
                     /site_type="active"
                     /db_xref="CDD:270668"
     Site            order(119..121,127,139,141,158,187..190,193..194,238..239,
                     241,251..252)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270668"
     Site            order(234,238..239,269..274,276,316,320)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270668"
     Site            251..275
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270668"
     CDS             1..372
                     /gene="LOC121354030"
                     /coded_by="XM_041468340.1:1..1119"
                     /db_xref="GeneID:121354030"
ORIGIN      
        1 mhipeysqiv splylithkk dyfhwgpeqq qafaqikqki thavalgpvk tepevknmpy
       61 saagnrneeq epvaqaeeap pynqlppkkp cyalftdrsc rvdkkwvlnh edvtlgellg
      121 kgnfgevykg tlkdktpvai ktckedlpqe lkikflsear ilkqydhpni vkligvctqr
      181 qpiyivmelv pggdflsflr kkkdelktkq lvkfsldaas gmaylesknc ihrdlaarnc
      241 lvgesnilki sdfgmsrqed dgvysssglk qipikwtape alnygrytse sdvwsfgill
      301 wetfslgvcp ypgmtnqqar eqvekgyrms apqkcpeeiy kimqrcwdyk penrpkfsei
      361 qkelssikkk vt
//
LOCUS       XP_041324275            1454 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-mannosidase 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324275
VERSION     XP_041324275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1454
                     /product="alpha-mannosidase 2 isoform X1"
                     /calculated_mol_wt=162489
     Region          434..1454
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1454
                     /gene="MAN2A1"
                     /coded_by="XM_041468341.1:131..4495"
                     /db_xref="GeneID:121354031"
ORIGIN      
        1 mlqspaaarr gqsggvprls sllssrffge gchtptadga apaatgtsvr gaserlrgss
       61 rhaepgagst aaparaerrg ggtvaaarpe srtpgrcgrr grsrardaal rrrrgrrtgg
      121 gslgaellrc grrssggggs apagegggrl rrrvratrgs gaaaeaaggg eggrrrkgag
      181 ssaawsarrc ccrhfpagrs ptreldplpe tldsplslag gvstrlsvsa rraggnfshf
      241 sgegfgpprs ggsacgslrg grtlasdrga argarvrrpr reqrggagpa aaemklsrqf
      301 tvfgsavfcv vifslylmld rghfdhpksp rregtfpkvs lwilpvyqgq lsilqekidh
      361 lerllaenne iisnirdsvi nlsesvkdgq knpeavnfgp rsvselfpsa svllavdsed
      421 clfasksrsh ssgvqmldvy dilpfdnpdg gvwkqgfdit ynenewdsep lqvfvvphsh
      481 ndpgwlktfd dyfrdqtqhi lnnmviklqe dnrrkfiwse isyfskwwdg idsqkkdavk
      541 rlikdgqfei vtggwvmpde asshyfalid qlieghqwle knlgvkpksg waidpfghsp
      601 tmayllkrag fskmliqrih ysvkkhfatq ktleffwrqn wdlgsstdil chmmpfysyd
      661 vphtcgpdpk iccqfdfrrl pggriscpwr vppeaihagn vqhrawiild qyrkksklfr
      721 tkvllaplgd dfrytessew dqqyqnyqkl fdymnsrpew hvkaqfgtls dyfeallkes
      781 nlgekssnsl fpvlsgdfft yadrdhhyws gyftsrpfyk rldrvlesyi raaeilysla
      841 lvqssksekm svfpsvdnyk lltearrnlg lfqhhdaitg takdwvvvdy gtrlfhsimn
      901 lkkviidsvh ililkdksay sydtatpllk mddvqasqds lprktviklt lqpryllihn
      961 pteqerfsvv svnvnsprvk llsplgkpvt vqisavwdga ttvsheayqv sfvahlpplg
     1021 igvyqllede sseavladyn iyvrnsrqek pdrvfkikem qhavdniile naymklwfsg
     1081 msgllekins kedgknhqmk vefawygtts nrdksgaylf lpdgdakpyi ftdpptirva
     1141 hgtifsevvc ffhhvthtmr lykvqglegq slevsnivdi rgeynrelam rissdinsqn
     1201 rfytdlngyq iqprltmskl plqaniypmt tmayiqevgi rltlhsaqsl gvaslkngql
     1261 evimdrrlmq ddnrglgqgv qdnkitanvf rlllerrhgt dvneekapvs fpsllshmts
     1321 lflnhpvipm ttnadsgvpe listfsplms smpcdmhivn lrtiqakvdt kpsdeaalil
     1381 hrkgfdckfs nrdtgllcst tqgkikvhkl fskfrveslt ptslslmnsp pdarnisein
     1441 mssmeintfr irlr
//
LOCUS       XP_041324276            1444 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-mannosidase 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324276
VERSION     XP_041324276.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468342.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1444
                     /product="alpha-mannosidase 2 isoform X2"
                     /calculated_mol_wt=161290
     Region          424..1444
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1444
                     /gene="MAN2A1"
                     /coded_by="XM_041468342.1:131..4465"
                     /db_xref="GeneID:121354031"
ORIGIN      
        1 mlqspaaarr gqsggvprls sllssrffge gchtptadga apaatgtsvr gaserlrgss
       61 rhaepgagst aaparaerrg ggtvaaarpe srtpgrcgrr grsrardaal rrrrgrrtgg
      121 gslgaellrc grrssggggs apagegggrl rrrvratrgs gaaaeaaggg eggrrrkgag
      181 ssaawsarrc ccrhfpagrs ptreldplpe tldsplslag gvstrlsvsa rraggnfshf
      241 sgegfgpprs ggsacgslrg grtlasdrga argarvrrpr reqrggagpa aaemklsrqf
      301 tvfgsavfcv vifslylmld rghfdhpksp rregtfpkgq lsilqekidh lerllaenne
      361 iisnirdsvi nlsesvkdgq knpeavnfgp rsvselfpsa svllavdsed clfasksrsh
      421 ssgvqmldvy dilpfdnpdg gvwkqgfdit ynenewdsep lqvfvvphsh ndpgwlktfd
      481 dyfrdqtqhi lnnmviklqe dnrrkfiwse isyfskwwdg idsqkkdavk rlikdgqfei
      541 vtggwvmpde asshyfalid qlieghqwle knlgvkpksg waidpfghsp tmayllkrag
      601 fskmliqrih ysvkkhfatq ktleffwrqn wdlgsstdil chmmpfysyd vphtcgpdpk
      661 iccqfdfrrl pggriscpwr vppeaihagn vqhrawiild qyrkksklfr tkvllaplgd
      721 dfrytessew dqqyqnyqkl fdymnsrpew hvkaqfgtls dyfeallkes nlgekssnsl
      781 fpvlsgdfft yadrdhhyws gyftsrpfyk rldrvlesyi raaeilysla lvqssksekm
      841 svfpsvdnyk lltearrnlg lfqhhdaitg takdwvvvdy gtrlfhsimn lkkviidsvh
      901 ililkdksay sydtatpllk mddvqasqds lprktviklt lqpryllihn pteqerfsvv
      961 svnvnsprvk llsplgkpvt vqisavwdga ttvsheayqv sfvahlpplg igvyqllede
     1021 sseavladyn iyvrnsrqek pdrvfkikem qhavdniile naymklwfsg msgllekins
     1081 kedgknhqmk vefawygtts nrdksgaylf lpdgdakpyi ftdpptirva hgtifsevvc
     1141 ffhhvthtmr lykvqglegq slevsnivdi rgeynrelam rissdinsqn rfytdlngyq
     1201 iqprltmskl plqaniypmt tmayiqevgi rltlhsaqsl gvaslkngql evimdrrlmq
     1261 ddnrglgqgv qdnkitanvf rlllerrhgt dvneekapvs fpsllshmts lflnhpvipm
     1321 ttnadsgvpe listfsplms smpcdmhivn lrtiqakvdt kpsdeaalil hrkgfdckfs
     1381 nrdtgllcst tqgkikvhkl fskfrveslt ptslslmnsp pdarnisein mssmeintfr
     1441 irlr
//
LOCUS       XP_041324277            1019 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-mannosidase 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324277
VERSION     XP_041324277.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468343.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1019
                     /product="alpha-mannosidase 2 isoform X3"
                     /calculated_mol_wt=117069
     Region          1..1019
                     /region_name="PLN02701"
                     /note="alpha-mannosidase"
                     /db_xref="CDD:178304"
     CDS             1..1019
                     /gene="MAN2A1"
                     /coded_by="XM_041468343.1:411..3470"
                     /db_xref="GeneID:121354031"
ORIGIN      
        1 mldvydilpf dnpdggvwkq gfditynene wdseplqvfv vphshndpgw lktfddyfrd
       61 qtqhilnnmv iklqednrrk fiwseisyfs kwwdgidsqk kdavkrlikd gqfeivtggw
      121 vmpdeasshy falidqlieg hqwleknlgv kpksgwaidp fghsptmayl lkragfskml
      181 iqrihysvkk hfatqktlef fwrqnwdlgs stdilchmmp fysydvphtc gpdpkiccqf
      241 dfrrlpggri scpwrvppea ihagnvqhra wiildqyrkk sklfrtkvll aplgddfryt
      301 essewdqqyq nyqklfdymn srpewhvkaq fgtlsdyfea llkesnlgek ssnslfpvls
      361 gdfftyadrd hhywsgyfts rpfykrldrv lesyiraaei lyslalvqss ksekmsvfps
      421 vdnyklltea rrnlglfqhh daitgtakdw vvvdygtrlf hsimnlkkvi idsvhililk
      481 dksaysydta tpllkmddvq asqdslprkt vikltlqpry llihnpteqe rfsvvsvnvn
      541 sprvkllspl gkpvtvqisa vwdgattvsh eayqvsfvah lpplgigvyq lledesseav
      601 ladyniyvrn srqekpdrvf kikemqhavd niilenaymk lwfsgmsgll ekinskedgk
      661 nhqmkvefaw ygttsnrdks gaylflpdgd akpyiftdpp tirvahgtif sevvcffhhv
      721 thtmrlykvq glegqslevs nivdirgeyn relamrissd insqnrfytd lngyqiqprl
      781 tmsklplqan iypmttmayi qevgirltlh saqslgvasl kngqlevimd rrlmqddnrg
      841 lgqgvqdnki tanvfrllle rrhgtdvnee kapvsfpsll shmtslflnh pvipmttnad
      901 sgvpelistf splmssmpcd mhivnlrtiq akvdtkpsde aalilhrkgf dckfsnrdtg
      961 llcsttqgki kvhklfskfr vesltptsls lmnsppdarn iseinmssme intfrirlr
//
LOCUS       XP_041324278             669 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Praja-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324278
VERSION     XP_041324278.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468344.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..669
                     /product="E3 ubiquitin-protein ligase Praja-2"
                     /calculated_mol_wt=75043
     Region          <539..>655
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          609..654
                     /region_name="RING-H2_PJA1_2"
                     /note="RING finger, H2 subclass, found in protein E3
                     ubiquitin-protein ligase Praja-1, Praja-2, and similar
                     proteins; cd16465"
                     /db_xref="CDD:438128"
     CDS             1..669
                     /gene="PJA2"
                     /coded_by="XM_041468344.1:175..2184"
                     /db_xref="GeneID:121354032"
ORIGIN      
        1 mgqglgktaw pkpaggyqtl tgrrrhsyvg fipflnnqdl dghqqsndcr qleledvqke
       61 hslsfsedss plvqvsadll deplskdagt repvcqsaps qtspfsvfcy glegnqisrd
      121 lmnpyeksed laeyssgghn dlngkngiaf vnvdsyqpds sdgeeedald kyswireaag
      181 liqgrldnil sqcekdmesv ndlqsrlsaf nhsvyresce eagpmplacp nnrtlrsaed
      241 eakskislsd nsyetqqikh ivdvgietlv pvadvlnvgd gdtdqensse lvvrpkirkq
      301 ntakeleren hlpsddeeen dswrrigiad vqqchpecpl rdskdemssg vfflsrmhsh
      361 qknieiglrr nalareqnnv lsgsafwnef edhnthylms hkdedssecs dgewstsvps
      421 yftavekeqs ssdeswetvs creerdpsvq rsssgveees tdfcfqeeeq illeegeipw
      481 lqyreevess sdeendpicd fvhlgfflld gnnnleddss vsedldvewr lldefgdglg
      541 laqaipymep qfltymaleg hleavetala qlesltfdve qthppatket idclpqiivt
      601 sdykgqeqcc ticcseyveg emitelpchh lfhkpcvtlw lqrsgtcpvc rhvlasvlpe
      661 aaddtvffi
//
LOCUS       XP_041324279             669 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Praja-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324279
VERSION     XP_041324279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..669
                     /product="E3 ubiquitin-protein ligase Praja-2"
                     /calculated_mol_wt=75043
     Region          <539..>655
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          609..654
                     /region_name="RING-H2_PJA1_2"
                     /note="RING finger, H2 subclass, found in protein E3
                     ubiquitin-protein ligase Praja-1, Praja-2, and similar
                     proteins; cd16465"
                     /db_xref="CDD:438128"
     CDS             1..669
                     /gene="PJA2"
                     /coded_by="XM_041468345.1:31..2040"
                     /db_xref="GeneID:121354032"
ORIGIN      
        1 mgqglgktaw pkpaggyqtl tgrrrhsyvg fipflnnqdl dghqqsndcr qleledvqke
       61 hslsfsedss plvqvsadll deplskdagt repvcqsaps qtspfsvfcy glegnqisrd
      121 lmnpyeksed laeyssgghn dlngkngiaf vnvdsyqpds sdgeeedald kyswireaag
      181 liqgrldnil sqcekdmesv ndlqsrlsaf nhsvyresce eagpmplacp nnrtlrsaed
      241 eakskislsd nsyetqqikh ivdvgietlv pvadvlnvgd gdtdqensse lvvrpkirkq
      301 ntakeleren hlpsddeeen dswrrigiad vqqchpecpl rdskdemssg vfflsrmhsh
      361 qknieiglrr nalareqnnv lsgsafwnef edhnthylms hkdedssecs dgewstsvps
      421 yftavekeqs ssdeswetvs creerdpsvq rsssgveees tdfcfqeeeq illeegeipw
      481 lqyreevess sdeendpicd fvhlgfflld gnnnleddss vsedldvewr lldefgdglg
      541 laqaipymep qfltymaleg hleavetala qlesltfdve qthppatket idclpqiivt
      601 sdykgqeqcc ticcseyveg emitelpchh lfhkpcvtlw lqrsgtcpvc rhvlasvlpe
      661 aaddtvffi
//
LOCUS       XP_041324280             669 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Praja-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324280
VERSION     XP_041324280.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468346.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..669
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..669
                     /product="E3 ubiquitin-protein ligase Praja-2"
                     /calculated_mol_wt=75043
     Region          <539..>655
                     /region_name="HRD1"
                     /note="HRD ubiquitin ligase complex, ER membrane component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5243"
                     /db_xref="CDD:227568"
     Region          609..654
                     /region_name="RING-H2_PJA1_2"
                     /note="RING finger, H2 subclass, found in protein E3
                     ubiquitin-protein ligase Praja-1, Praja-2, and similar
                     proteins; cd16465"
                     /db_xref="CDD:438128"
     CDS             1..669
                     /gene="PJA2"
                     /coded_by="XM_041468346.1:429..2438"
                     /db_xref="GeneID:121354032"
ORIGIN      
        1 mgqglgktaw pkpaggyqtl tgrrrhsyvg fipflnnqdl dghqqsndcr qleledvqke
       61 hslsfsedss plvqvsadll deplskdagt repvcqsaps qtspfsvfcy glegnqisrd
      121 lmnpyeksed laeyssgghn dlngkngiaf vnvdsyqpds sdgeeedald kyswireaag
      181 liqgrldnil sqcekdmesv ndlqsrlsaf nhsvyresce eagpmplacp nnrtlrsaed
      241 eakskislsd nsyetqqikh ivdvgietlv pvadvlnvgd gdtdqensse lvvrpkirkq
      301 ntakeleren hlpsddeeen dswrrigiad vqqchpecpl rdskdemssg vfflsrmhsh
      361 qknieiglrr nalareqnnv lsgsafwnef edhnthylms hkdedssecs dgewstsvps
      421 yftavekeqs ssdeswetvs creerdpsvq rsssgveees tdfcfqeeeq illeegeipw
      481 lqyreevess sdeendpicd fvhlgfflld gnnnleddss vsedldvewr lldefgdglg
      541 laqaipymep qfltymaleg hleavetala qlesltfdve qthppatket idclpqiivt
      601 sdykgqeqcc ticcseyveg emitelpchh lfhkpcvtlw lqrsgtcpvc rhvlasvlpe
      661 aaddtvffi
//
LOCUS       XP_041324281              90 aa            linear   VRT 06-MAY-2021
DEFINITION  brain-specific angiogenesis inhibitor 1-associated protein 2-like,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324281
VERSION     XP_041324281.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468347.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521273.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..90
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>90
                     /product="brain-specific angiogenesis inhibitor
                     1-associated protein 2-like"
     Region          <1..>90
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     CDS             1..90
                     /gene="LOC121354034"
                     /coded_by="XM_041468347.1:<1..>272"
                     /codon_start=3
                     /db_xref="GeneID:121354034"
ORIGIN      
        1 dvlfqmaevh rqiqnqleem lksfhnellt qleqkvelds rylsaalkky qteqrskgds
       61 ldkcqaelkk lrkksqgskn pqkysdkelq
//
LOCUS       XP_041324282             142 aa            linear   VRT 06-MAY-2021
DEFINITION  glia maturation factor beta [Pyrgilauda ruficollis].
ACCESSION   XP_041324282
VERSION     XP_041324282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..142
                     /product="glia maturation factor beta"
                     /calculated_mol_wt=16592
     Region          9..130
                     /region_name="ADF_GMF-beta_like"
                     /note="ADF-homology domain of glia maturation factor beta
                     and related proteins; cd11283"
                     /db_xref="CDD:200439"
     CDS             1..142
                     /gene="GMFB"
                     /coded_by="XM_041468348.1:82..510"
                     /db_xref="GeneID:121354036"
ORIGIN      
        1 mseslvvcdv aedlveklrk frfrketnna aiimkidkdk qlvvldeehe gispdelkde
       61 lperqprfiv ysykyqhedg rvsyplcfif sspvgckpeq qmmyagsknk lvqtaeltkv
      121 feirntedlt eewlreklgf fh
//
LOCUS       XP_041324283             144 aa            linear   VRT 06-MAY-2021
DEFINITION  protein cornichon homolog 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324283
VERSION     XP_041324283.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468349.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..144
                     /product="protein cornichon homolog 1"
                     /calculated_mol_wt=16598
     Region          7..135
                     /region_name="Cornichon"
                     /note="Cornichon protein; pfam03311"
                     /db_xref="CDD:460883"
     CDS             1..144
                     /gene="CNIH1"
                     /coded_by="XM_041468349.1:68..502"
                     /db_xref="GeneID:121354037"
ORIGIN      
        1 maftfaafcy mlallltaal iffaiwhiia fdelktdykn pidqcntlnp lvlpeyliha
       61 ffcvmflcaa ewltlalnmp llayhiwrym srpvmsgpgl ydpttimnad ilaycqkegw
      121 cklafyllsf fyylygmiyv lvss
//
LOCUS       XP_041324284             217 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase inhibitor 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324284
VERSION     XP_041324284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521317.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="cyclin-dependent kinase inhibitor 3"
                     /calculated_mol_wt=23753
     Region          34..196
                     /region_name="CDKN3-like"
                     /note="cyclin-dependent kinase inhibitor 3 and similar
                     proteins; cd14505"
                     /db_xref="CDD:350355"
     CDS             1..217
                     /gene="CDKN3"
                     /coded_by="XM_041468350.1:1..654"
                     /db_xref="GeneID:121354038"
ORIGIN      
        1 mspplspqpa aapadgfass ddeaaeedps plhiswlsls plysseflgl cslpgcrfkd
       61 irrnlqkdig elkscgiqdv fvlctrgels kyrvpnlmdt yqqhgicvhh hpipdgnapd
      121 iatcckilee lrtclenkqk tmihcygglg rsclvaacll lqlsdtlapq qvieslrnlr
      181 gsgaiqtikq ynflhdfren laahlatkdp vlrsasr
//
LOCUS       XP_041324286             408 aa            linear   VRT 06-MAY-2021
DEFINITION  bone morphogenetic protein 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324286
VERSION     XP_041324286.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468352.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="bone morphogenetic protein 4 isoform X1"
                     /calculated_mol_wt=46388
     Region          50..279
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; pfam00688"
                     /db_xref="CDD:459906"
     Region          302..408
                     /region_name="TGF_beta_BMP4_BMP2B"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in bone morphogenetic protein 4 (BMP-4) and
                     similar proteins; cd19391"
                     /db_xref="CDD:381661"
     Site            order(313,315,319..320,322,332,334..336,353..354,357..358,
                     360..361,364,367..369,372,374..375,378,398..400,402,408)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381661"
     CDS             1..408
                     /gene="BMP4"
                     /coded_by="XM_041468352.1:11..1237"
                     /db_xref="GeneID:121354039"
ORIGIN      
        1 mprdtmipgn rmlmvillcq vllggtnhas lipetgrkkv aelqgqagsg rrsaqshell
       61 rgfettllqm fglrrrpqps ksavipsyml dlyrlqsgee eeslqeislq yperstsran
      121 tvrsfhheeh lesvpgpsea prirfvfnls svpeneviss aelrlyreqv eepsaawerg
      181 fhriniyevm kplseraqai trlldtrlvh hnvtrwesfd vspavirwtk dkqpnhglvi
      241 evthlhhaqt hqgkhvrisr slpqgrgdwa qlrpllvtfg hdgrghaltr rarrspkhqr
      301 srknkkncrr halyvdfsdv gwndwivapp gyqafychgd cpfpladhln stnhaivqtl
      361 vnsvnssipk accvptelsa ismlyldeyd kvvlknyqem vvegcgcr
//
LOCUS       XP_041324287             403 aa            linear   VRT 06-MAY-2021
DEFINITION  bone morphogenetic protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324287
VERSION     XP_041324287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468353.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="bone morphogenetic protein 4 isoform X2"
                     /calculated_mol_wt=45787
     Region          45..274
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; pfam00688"
                     /db_xref="CDD:459906"
     Region          297..403
                     /region_name="TGF_beta_BMP4_BMP2B"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in bone morphogenetic protein 4 (BMP-4) and
                     similar proteins; cd19391"
                     /db_xref="CDD:381661"
     Site            order(308,310,314..315,317,327,329..331,348..349,352..353,
                     355..356,359,362..364,367,369..370,373,393..395,397,403)
                     /site_type="other"
                     /note="putative homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381661"
     CDS             1..403
                     /gene="BMP4"
                     /coded_by="XM_041468353.1:26..1237"
                     /db_xref="GeneID:121354039"
ORIGIN      
        1 mipgnrmlmv illcqvllgg tnhaslipet grkkvaelqg qagsgrrsaq shellrgfet
       61 tllqmfglrr rpqpsksavi psymldlyrl qsgeeeeslq eislqypers tsrantvrsf
      121 hheehlesvp gpseaprirf vfnlssvpen evissaelrl yreqveepsa awergfhrin
      181 iyevmkplse raqaitrlld trlvhhnvtr wesfdvspav irwtkdkqpn hglvievthl
      241 hhaqthqgkh vrisrslpqg rgdwaqlrpl lvtfghdgrg haltrrarrs pkhqrsrknk
      301 kncrrhalyv dfsdvgwndw ivappgyqaf ychgdcpfpl adhlnstnha ivqtlvnsvn
      361 ssipkaccvp telsaismly ldeydkvvlk nyqemvvegc gcr
//
LOCUS       XP_041324288             246 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 239-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324288
VERSION     XP_041324288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521329.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="zinc finger protein 239-like"
                     /calculated_mol_wt=28388
     Region          <29..236
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          57..77
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(62,64,66,68..69,72..73,76,90,92,96..97,100..101,104,
                     118,120,122,124..125,128..129,132)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          85..105
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          113..133
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          141..161
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          169..189
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(174,176,178,180..181,184..185,188,202,204,208..209,
                     212..213,216,230,232,234,236..237,240..241)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          197..217
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          225..243
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..246
                     /gene="LOC121354040"
                     /coded_by="XM_041468354.1:52..792"
                     /db_xref="GeneID:121354040"
ORIGIN      
        1 meeeekpwrf rtrrgckpsp gscgeqrapl sqeggrrsrq sselvekahg rekphkclec
       61 gkgfrwssel trhkvihtge rpyeceecgk sfnwssnliq hqrihngekp fecgkcgksf
      121 rhssgliqhq vihtgeqpht clecgksfgw hsalrrhqli htgerpyecp qcgkrfhtss
      181 svlrheqiht eerpfrcpdc gkgfkqnstl tihrrthtge rpyecgecgk sfsqssnltq
      241 hqrrrh
//
LOCUS       XP_041324289             245 aa            linear   VRT 06-MAY-2021
DEFINITION  histo-blood group ABO system transferase 2-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324289
VERSION     XP_041324289.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468355.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="histo-blood group ABO system transferase 2-like"
                     /calculated_mol_wt=28114
     Region          4..227
                     /region_name="Glyco_tranf_GTA_type"
                     /note="Glycosyltransferase family A (GT-A) includes
                     diverse families of glycosyl transferases with a common
                     GT-A type structural fold; cl11394"
                     /db_xref="CDD:472172"
     CDS             1..245
                     /gene="LOC121354041"
                     /coded_by="XM_041468355.1:1..738"
                     /db_xref="GeneID:121354041"
ORIGIN      
        1 mslryvqfie gfmnsankyf laghpvnfyl ftdspektsh lqmapenhlf vipvqqdprw
       61 qdisrsrmdi issyiqrqfq hevdylysmd vnvqllahig veiidalvat isswqvtpqq
      121 dnkasethpe shpaipegqg dfyytasfyg gsvsevyklt racsagllqd rengietswh
      181 heshlnryll qhkptrllsp eyywdtelsp ssiqvkrmcp vhqhsqgqap qtknvrpflf
      241 tapln
//
LOCUS       XP_041324290             199 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription activator BRG1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324290
VERSION     XP_041324290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468356.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521395.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..199
                     /product="transcription activator BRG1-like"
                     /calculated_mol_wt=20114
     Region          107..141
                     /region_name="QLQ"
                     /note="pfam08880"
                     /db_xref="CDD:462622"
     CDS             1..199
                     /gene="LOC121354043"
                     /coded_by="XM_041468356.1:346..945"
                     /db_xref="GeneID:121354043"
ORIGIN      
        1 mlksdflgff clpqpldamh ekgmsedpry gqmkgmgmrp gghagmgppp spmdqhsqgy
       61 psplggseha sspvpsngps sssaggsgaa ldgsgsdspa lgrgpspfna aqlhqlraqi
      121 maykllargq plpehlqvav qgkrplpgmq pqipalpppa gaaqgpgqap gagpappgys
      181 rphgeeglgg agrgwewle
//
LOCUS       XP_041324291             194 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium channel subfamily K member 6-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324291
VERSION     XP_041324291.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468357.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521406.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..194
                     /product="potassium channel subfamily K member 6-like"
     Region          <1..35
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     Region          81..>114
                     /region_name="Ion_trans_2"
                     /note="Ion channel; pfam07885"
                     /db_xref="CDD:462301"
     CDS             1..194
                     /gene="LOC121354044"
                     /coded_by="XM_041468357.1:<1..587"
                     /codon_start=3
                     /db_xref="GeneID:121354044"
ORIGIN      
        1 ygsvtplsaa gkafcaayaa mgvpatmfll aatarhlavp larrprgylq arwgysrrga
       61 arahllglla vtlvllvllp atafylleat wsyldavyfc vislctvgfg dlvparqarq
      121 plrqlyqvav aaylllgvtg vlllaqtlrh vaelhgvpga apapdgdadg eegagllegt
      181 rdgakeargg rdsg
//
LOCUS       XP_041324292            3022 aa            linear   VRT 06-MAY-2021
DEFINITION  ranBP2-like and GRIP domain-containing protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324292
VERSION     XP_041324292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3022
                     /product="ranBP2-like and GRIP domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=337281
     Region          4..223
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          60..90
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <866..>1146
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          1186..1302
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1200,1202..1204,1209..1214,1231,1233,1235..1236,
                     1238,1240..1242,1245,1247,1251,1255,1265,1267,1280,1284)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1398..1427
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1402..1421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1460..1489
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1464..1483
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1528..1557
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1532..1551
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1778..1894
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1792,1794..1796,1801..1806,1823,1825,1827..1828,
                     1830,1832..1834,1837,1839,1843,1847,1857,1859,1872,1876)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          2076..2192
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2090,2092..2094,2099..2104,2121,2123,2125..2126,
                     2128,2130..2132,2135,2137,2141,2145,2155,2157,2170,2174)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2404..2465
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2509..2562
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2723..2839
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2862..3020
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2912..2913,2918,2969,2971,2979)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..3022
                     /gene="LOC121354046"
                     /coded_by="XM_041468358.1:206..9274"
                     /db_xref="GeneID:121354046"
ORIGIN      
        1 mmrrtkpeve ryvaslqaaa sspreksmkg flfaklyfei keyelakryi stylnvqerd
       61 pkahrflgqi yeaednieka fgcykrsvel nptqkdlvlk iaellcsndi tdgrakywvd
      121 raaklfpgsp aiyrlkeqll dckgedgwnq lfdliqaely arpddvyini rlvalyrsnn
      181 rlkdavlhcq eaekriplhs slewcscvve tfeeyleslq dleydknnwr tikkdhllay
      241 ssfvkltlss rdvqecreal esfdralqsv kpyvsaadel srtyvemkgq lymhagalll
      301 kmaqdnetqw ramcelaalc yllsfqvpkp ksklikgdqt gqdmlemlac drksqsghml
      361 lnlshgkqdf fkeivesfan ksgsfalfds lfesgasrer sfigtddign vstqapvqie
      421 lnkydigair lhsgslqhlv wlglqwnsms vlppmrkwlk qlfhlpqets rletdapesi
      481 clldlevfli gviftsnlql qekfnshysa hqpqflplpi ckqlytekqr swwdavrtll
      541 qrksvpgtaa klrlivqhgi stlrtldkhg lqpaliihwa kslqktginl nsfydqkeyi
      601 grsvyywkkv lpmletikkk rsiseptdpl fkhfhsvdiq vfqvaayeee aqiafamlda
      661 vdgktddali afeaienvvs ywnlamifqr kaeeiendvv lpeeheerkt yllkakyylm
      721 kiiaesssdm svteklpvsl etvrevldtv iqelgencee gslafrngls rtvdsamkhs
      781 tpsptkfsfs ptktykfspk tppqwaedhk silqmicqqv ealknemqem klnnsntnas
      841 hrwpaenygt daipdsyqra qnlheapltv attgpsvfys qspaynsqyl lgtaatnvtp
      901 akppvygmnr ltpqphiysy qpppmhtppl qntsgcmfsq emygpplrfd spgttlispr
      961 taddyynysv pqastnptlp kpgyftnrsv tpptlkpaep kampkfgqpg taegskppls
     1021 tpaqpsqptt fkfkpnfksn dgdftfsspp qvapqplnap fnskeslldl ltsdkplqdd
     1081 ryvdqkpvsd atnssrnifn fsnkhvpgia lrentgqnvh knvgfeksdt fsvqesskpv
     1141 fmasnsdlan rsheteggst hggdedddgp hfdpvvplpd kievktgeed eeeffcnrak
     1201 lfrfdaeske wkergignvk ilkhkvsgkf rllmrrdqvl kicanhyint dmkltpnaas
     1261 dksfvwhald yadelpkpeq lairfktpee amlfkkkfee aqnilkslgs nadtsvaqss
     1321 gtaketanqd tkepnrttsg tmnlgfqflk dgtsgepdsk gtltatsaas sttisfgkda
     1381 qqacssggfg gfgqhllkkd qweckvclvp neamvkncvs cqspnpgmwq thstpmtgya
     1441 slkpsgntvq dkfgspfakk egqwdcsvcq tqneaedvnc cscqspkpqn qpntstpsvq
     1501 asaalglgsi adtskpqkng feglfakkeg qwdcstclvr negsslacia cetpnpsakp
     1561 tgdtlptpaf glksklpeld ggqlgtgfkf gleqgktppf tfqissdtea ksakegfnfs
     1621 mqmpaggfkf giqessknts kkdepskeht tgflksvdek dkkelpsdsg tgfqfqetae
     1681 kekidfvfgq nsststfael akstpregfq fgkkdpnfkg fsgageklfs sqnsktdqka
     1741 ntsadlgekd ddvyktedsd dihfepivqm pekvepftge edekvlysqr vklfrfdpet
     1801 sqwkergvgi lkilknevng kvrilmrreq vlkvcanhwi tttmnlkqls gsdkawmwma
     1861 ndfsdgdakl ehlaakfktp eqaeefkqkf eecqrllldi plqtphklvd tgrtaqliqr
     1921 aeemkcglkd lktfltddkt klseeesgag tnpvctssts dlvikphaes tgptlewdny
     1981 dlreealdds vsssvyaspl asspvrknlf rfgesttgfs fsfksalsps kspakqnqsr
     2041 tsvgtdedsd vtqeeerdgq yfepvvplpd lvevtsgeen eqvvfshrak lyrydkdanq
     2101 wkergigdik ilqnydnkqv rivmrrdqvl klcanhritp dmnlqqmkgs drawvwtacd
     2161 fadgerkvel lavrfklqdv adsfkqifde akhaqeretl itplssrant pkespcgkna
     2221 vavleettre rtdvshgddt seatveaaev sntsetptka vvsppkfvfg sesvksifsn
     2281 eksktftfgn tsatgslfgf sfnpprkseg hipasqntaq kepevsepsk issatqkpvd
     2341 skvdnlpass qdgpsnfsfr ilekgfnfsl fksnpmafwt stssmqpdsk aekttvsedv
     2401 psdevvivye ltptpeqral adflklpstf fcyknkpgyv sdedddedye tavkklngrl
     2461 ypsdseekkk gqgpikgvdn llmcvcvsdc svtlfeglak ksefnkerec aatlekkpap
     2521 eekdeikalq vpsasvcgvs tdtkgdrved vkseaeiqei kenevasssd lvctskeeip
     2581 tpskdevtvl vqsgtssges hsttetvqvs qtlsraedkp vdlstkksds ddsestqenr
     2641 iisfgfgnta glsfadlask ssedfafgsk dknfkwantg atvfgdtark adedeggsdd
     2701 evvhsddihf epivslpeve vksgeedeei lfkeraklyr wdrdvtqwke rgvgeikilf
     2761 htqkkyyrvl mrrdqvlkvc anhvitkemn lvpsdtsnna fiwtatdyad gevkveqfav
     2821 rfksqemans fkkmfeecql slselqkgpl slaaglskdt npvvyfevsa ddeplghitm
     2881 elfanivprt aenfralctg ekgfgfknsr fhrivtdfvc qggditnhdg tggrsiygta
     2941 fedenfivkh tgpgllsman kgrdtnnsqf fitlkkaehl dfkhvvfgfv kdgmdvvkki
     3001 esfgspkglv ngrivitdcg qi
//
LOCUS       XP_041324293            3003 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase RanBP2-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324293
VERSION     XP_041324293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468359.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3003
                     /product="E3 SUMO-protein ligase RanBP2-like isoform X2"
                     /calculated_mol_wt=335223
     Region          4..223
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          60..90
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <866..>1146
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          1186..1302
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1200,1202..1204,1209..1214,1231,1233,1235..1236,
                     1238,1240..1242,1245,1247,1251,1255,1265,1267,1280,1284)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1398..1427
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1402..1421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1460..1489
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1464..1483
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1528..1557
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1532..1551
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1778..1894
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1792,1794..1796,1801..1806,1823,1825,1827..1828,
                     1830,1832..1834,1837,1839,1843,1847,1857,1859,1872,1876)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          2076..2192
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2090,2092..2094,2099..2104,2121,2123,2125..2126,
                     2128,2130..2132,2135,2137,2141,2145,2155,2157,2170,2174)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2404..2465
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2490..2543
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2704..2820
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2843..3001
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2893..2894,2899,2950,2952,2960)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..3003
                     /gene="LOC121354046"
                     /coded_by="XM_041468359.1:206..9217"
                     /db_xref="GeneID:121354046"
ORIGIN      
        1 mmrrtkpeve ryvaslqaaa sspreksmkg flfaklyfei keyelakryi stylnvqerd
       61 pkahrflgqi yeaednieka fgcykrsvel nptqkdlvlk iaellcsndi tdgrakywvd
      121 raaklfpgsp aiyrlkeqll dckgedgwnq lfdliqaely arpddvyini rlvalyrsnn
      181 rlkdavlhcq eaekriplhs slewcscvve tfeeyleslq dleydknnwr tikkdhllay
      241 ssfvkltlss rdvqecreal esfdralqsv kpyvsaadel srtyvemkgq lymhagalll
      301 kmaqdnetqw ramcelaalc yllsfqvpkp ksklikgdqt gqdmlemlac drksqsghml
      361 lnlshgkqdf fkeivesfan ksgsfalfds lfesgasrer sfigtddign vstqapvqie
      421 lnkydigair lhsgslqhlv wlglqwnsms vlppmrkwlk qlfhlpqets rletdapesi
      481 clldlevfli gviftsnlql qekfnshysa hqpqflplpi ckqlytekqr swwdavrtll
      541 qrksvpgtaa klrlivqhgi stlrtldkhg lqpaliihwa kslqktginl nsfydqkeyi
      601 grsvyywkkv lpmletikkk rsiseptdpl fkhfhsvdiq vfqvaayeee aqiafamlda
      661 vdgktddali afeaienvvs ywnlamifqr kaeeiendvv lpeeheerkt yllkakyylm
      721 kiiaesssdm svteklpvsl etvrevldtv iqelgencee gslafrngls rtvdsamkhs
      781 tpsptkfsfs ptktykfspk tppqwaedhk silqmicqqv ealknemqem klnnsntnas
      841 hrwpaenygt daipdsyqra qnlheapltv attgpsvfys qspaynsqyl lgtaatnvtp
      901 akppvygmnr ltpqphiysy qpppmhtppl qntsgcmfsq emygpplrfd spgttlispr
      961 taddyynysv pqastnptlp kpgyftnrsv tpptlkpaep kampkfgqpg taegskppls
     1021 tpaqpsqptt fkfkpnfksn dgdftfsspp qvapqplnap fnskeslldl ltsdkplqdd
     1081 ryvdqkpvsd atnssrnifn fsnkhvpgia lrentgqnvh knvgfeksdt fsvqesskpv
     1141 fmasnsdlan rsheteggst hggdedddgp hfdpvvplpd kievktgeed eeeffcnrak
     1201 lfrfdaeske wkergignvk ilkhkvsgkf rllmrrdqvl kicanhyint dmkltpnaas
     1261 dksfvwhald yadelpkpeq lairfktpee amlfkkkfee aqnilkslgs nadtsvaqss
     1321 gtaketanqd tkepnrttsg tmnlgfqflk dgtsgepdsk gtltatsaas sttisfgkda
     1381 qqacssggfg gfgqhllkkd qweckvclvp neamvkncvs cqspnpgmwq thstpmtgya
     1441 slkpsgntvq dkfgspfakk egqwdcsvcq tqneaedvnc cscqspkpqn qpntstpsvq
     1501 asaalglgsi adtskpqkng feglfakkeg qwdcstclvr negsslacia cetpnpsakp
     1561 tgdtlptpaf glksklpeld ggqlgtgfkf gleqgktppf tfqissdtea ksakegfnfs
     1621 mqmpaggfkf giqessknts kkdepskeht tgflksvdek dkkelpsdsg tgfqfqetae
     1681 kekidfvfgq nsststfael akstpregfq fgkkdpnfkg fsgageklfs sqnsktdqka
     1741 ntsadlgekd ddvyktedsd dihfepivqm pekvepftge edekvlysqr vklfrfdpet
     1801 sqwkergvgi lkilknevng kvrilmrreq vlkvcanhwi tttmnlkqls gsdkawmwma
     1861 ndfsdgdakl ehlaakfktp eqaeefkqkf eecqrllldi plqtphklvd tgrtaqliqr
     1921 aeemkcglkd lktfltddkt klseeesgag tnpvctssts dlvikphaes tgptlewdny
     1981 dlreealdds vsssvyaspl asspvrknlf rfgesttgfs fsfksalsps kspakqnqsr
     2041 tsvgtdedsd vtqeeerdgq yfepvvplpd lvevtsgeen eqvvfshrak lyrydkdanq
     2101 wkergigdik ilqnydnkqv rivmrrdqvl klcanhritp dmnlqqmkgs drawvwtacd
     2161 fadgerkvel lavrfklqdv adsfkqifde akhaqeretl itplssrant pkespcgkna
     2221 vavleettre rtdvshgddt seatveaaev sntsetptka vvsppkfvfg sesvksifsn
     2281 eksktftfgn tsatgslfgf sfnpprkseg hipasqntaq kepevsepsk issatqkpvd
     2341 skvdnlpass qdgpsnfsfr ilekgfnfsl fksnpmafwt stssmqpdsk aekttvsedv
     2401 psdevvivye ltptpeqral adflklpstf fcyknkpgyv sdedddedye tavkklngrl
     2461 ypsdseekkk gqgpikagla kksefnkere caatlekkpa peekdeikal qvpsasvcgv
     2521 stdtkgdrve dvkseaeiqe ikenevasss dlvctskeei ptpskdevtv lvqsgtssge
     2581 shsttetvqv sqtlsraedk pvdlstkksd sddsestqen riisfgfgnt aglsfadlas
     2641 kssedfafgs kdknfkwant gatvfgdtar kadedeggsd devvhsddih fepivslpev
     2701 evksgeedee ilfkerakly rwdrdvtqwk ergvgeikil fhtqkkyyrv lmrrdqvlkv
     2761 canhvitkem nlvpsdtsnn afiwtatdya dgevkveqfa vrfksqeman sfkkmfeecq
     2821 lslselqkgp lslaaglskd tnpvvyfevs addeplghit melfanivpr taenfralct
     2881 gekgfgfkns rfhrivtdfv cqggditnhd gtggrsiygt afedenfivk htgpgllsma
     2941 nkgrdtnnsq ffitlkkaeh ldfkhvvfgf vkdgmdvvkk iesfgspkgl vngrivitdc
     3001 gqi
//
LOCUS       XP_041324294            3002 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase RanBP2-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324294
VERSION     XP_041324294.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468360.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3002
                     /product="E3 SUMO-protein ligase RanBP2-like isoform X3"
                     /calculated_mol_wt=335152
     Region          4..223
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          60..90
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <866..>1146
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          1186..1302
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1200,1202..1204,1209..1214,1231,1233,1235..1236,
                     1238,1240..1242,1245,1247,1251,1255,1265,1267,1280,1284)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1398..1427
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1402..1421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1460..1489
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1464..1483
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1528..1557
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1532..1551
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1778..1894
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1792,1794..1796,1801..1806,1823,1825,1827..1828,
                     1830,1832..1834,1837,1839,1843,1847,1857,1859,1872,1876)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          2076..2192
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2090,2092..2094,2099..2104,2121,2123,2125..2126,
                     2128,2130..2132,2135,2137,2141,2145,2155,2157,2170,2174)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2404..2465
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2489..2542
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2703..2819
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2842..3000
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2892..2893,2898,2949,2951,2959)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..3002
                     /gene="LOC121354046"
                     /coded_by="XM_041468360.1:206..9214"
                     /db_xref="GeneID:121354046"
ORIGIN      
        1 mmrrtkpeve ryvaslqaaa sspreksmkg flfaklyfei keyelakryi stylnvqerd
       61 pkahrflgqi yeaednieka fgcykrsvel nptqkdlvlk iaellcsndi tdgrakywvd
      121 raaklfpgsp aiyrlkeqll dckgedgwnq lfdliqaely arpddvyini rlvalyrsnn
      181 rlkdavlhcq eaekriplhs slewcscvve tfeeyleslq dleydknnwr tikkdhllay
      241 ssfvkltlss rdvqecreal esfdralqsv kpyvsaadel srtyvemkgq lymhagalll
      301 kmaqdnetqw ramcelaalc yllsfqvpkp ksklikgdqt gqdmlemlac drksqsghml
      361 lnlshgkqdf fkeivesfan ksgsfalfds lfesgasrer sfigtddign vstqapvqie
      421 lnkydigair lhsgslqhlv wlglqwnsms vlppmrkwlk qlfhlpqets rletdapesi
      481 clldlevfli gviftsnlql qekfnshysa hqpqflplpi ckqlytekqr swwdavrtll
      541 qrksvpgtaa klrlivqhgi stlrtldkhg lqpaliihwa kslqktginl nsfydqkeyi
      601 grsvyywkkv lpmletikkk rsiseptdpl fkhfhsvdiq vfqvaayeee aqiafamlda
      661 vdgktddali afeaienvvs ywnlamifqr kaeeiendvv lpeeheerkt yllkakyylm
      721 kiiaesssdm svteklpvsl etvrevldtv iqelgencee gslafrngls rtvdsamkhs
      781 tpsptkfsfs ptktykfspk tppqwaedhk silqmicqqv ealknemqem klnnsntnas
      841 hrwpaenygt daipdsyqra qnlheapltv attgpsvfys qspaynsqyl lgtaatnvtp
      901 akppvygmnr ltpqphiysy qpppmhtppl qntsgcmfsq emygpplrfd spgttlispr
      961 taddyynysv pqastnptlp kpgyftnrsv tpptlkpaep kampkfgqpg taegskppls
     1021 tpaqpsqptt fkfkpnfksn dgdftfsspp qvapqplnap fnskeslldl ltsdkplqdd
     1081 ryvdqkpvsd atnssrnifn fsnkhvpgia lrentgqnvh knvgfeksdt fsvqesskpv
     1141 fmasnsdlan rsheteggst hggdedddgp hfdpvvplpd kievktgeed eeeffcnrak
     1201 lfrfdaeske wkergignvk ilkhkvsgkf rllmrrdqvl kicanhyint dmkltpnaas
     1261 dksfvwhald yadelpkpeq lairfktpee amlfkkkfee aqnilkslgs nadtsvaqss
     1321 gtaketanqd tkepnrttsg tmnlgfqflk dgtsgepdsk gtltatsaas sttisfgkda
     1381 qqacssggfg gfgqhllkkd qweckvclvp neamvkncvs cqspnpgmwq thstpmtgya
     1441 slkpsgntvq dkfgspfakk egqwdcsvcq tqneaedvnc cscqspkpqn qpntstpsvq
     1501 asaalglgsi adtskpqkng feglfakkeg qwdcstclvr negsslacia cetpnpsakp
     1561 tgdtlptpaf glksklpeld ggqlgtgfkf gleqgktppf tfqissdtea ksakegfnfs
     1621 mqmpaggfkf giqessknts kkdepskeht tgflksvdek dkkelpsdsg tgfqfqetae
     1681 kekidfvfgq nsststfael akstpregfq fgkkdpnfkg fsgageklfs sqnsktdqka
     1741 ntsadlgekd ddvyktedsd dihfepivqm pekvepftge edekvlysqr vklfrfdpet
     1801 sqwkergvgi lkilknevng kvrilmrreq vlkvcanhwi tttmnlkqls gsdkawmwma
     1861 ndfsdgdakl ehlaakfktp eqaeefkqkf eecqrllldi plqtphklvd tgrtaqliqr
     1921 aeemkcglkd lktfltddkt klseeesgag tnpvctssts dlvikphaes tgptlewdny
     1981 dlreealdds vsssvyaspl asspvrknlf rfgesttgfs fsfksalsps kspakqnqsr
     2041 tsvgtdedsd vtqeeerdgq yfepvvplpd lvevtsgeen eqvvfshrak lyrydkdanq
     2101 wkergigdik ilqnydnkqv rivmrrdqvl klcanhritp dmnlqqmkgs drawvwtacd
     2161 fadgerkvel lavrfklqdv adsfkqifde akhaqeretl itplssrant pkespcgkna
     2221 vavleettre rtdvshgddt seatveaaev sntsetptka vvsppkfvfg sesvksifsn
     2281 eksktftfgn tsatgslfgf sfnpprkseg hipasqntaq kepevsepsk issatqkpvd
     2341 skvdnlpass qdgpsnfsfr ilekgfnfsl fksnpmafwt stssmqpdsk aekttvsedv
     2401 psdevvivye ltptpeqral adflklpstf fcyknkpgyv sdedddedye tavkklngrl
     2461 ypsdseekkk gqgpikglak ksefnkerec aatlekkpap eekdeikalq vpsasvcgvs
     2521 tdtkgdrved vkseaeiqei kenevasssd lvctskeeip tpskdevtvl vqsgtssges
     2581 hsttetvqvs qtlsraedkp vdlstkksds ddsestqenr iisfgfgnta glsfadlask
     2641 ssedfafgsk dknfkwantg atvfgdtark adedeggsdd evvhsddihf epivslpeve
     2701 vksgeedeei lfkeraklyr wdrdvtqwke rgvgeikilf htqkkyyrvl mrrdqvlkvc
     2761 anhvitkemn lvpsdtsnna fiwtatdyad gevkveqfav rfksqemans fkkmfeecql
     2821 slselqkgpl slaaglskdt npvvyfevsa ddeplghitm elfanivprt aenfralctg
     2881 ekgfgfknsr fhrivtdfvc qggditnhdg tggrsiygta fedenfivkh tgpgllsman
     2941 kgrdtnnsqf fitlkkaehl dfkhvvfgfv kdgmdvvkki esfgspkglv ngrivitdcg
     3001 qi
//
LOCUS       XP_041324295            2996 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase RanBP2-like isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324295
VERSION     XP_041324295.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468361.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2996
                     /product="E3 SUMO-protein ligase RanBP2-like isoform X4"
                     /calculated_mol_wt=334356
     Region          4..223
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          60..90
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <866..>1146
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          1186..1302
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1200,1202..1204,1209..1214,1231,1233,1235..1236,
                     1238,1240..1242,1245,1247,1251,1255,1265,1267,1280,1284)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1398..1427
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1402..1421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1460..1489
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1464..1483
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1528..1557
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1532..1551
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1778..1894
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1792,1794..1796,1801..1806,1823,1825,1827..1828,
                     1830,1832..1834,1837,1839,1843,1847,1857,1859,1872,1876)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          2076..2192
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2090,2092..2094,2099..2104,2121,2123,2125..2126,
                     2128,2130..2132,2135,2137,2141,2145,2155,2157,2170,2174)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2378..2439
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2483..2536
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2697..2813
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2836..2994
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2886..2887,2892,2943,2945,2953)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..2996
                     /gene="LOC121354046"
                     /coded_by="XM_041468361.1:206..9196"
                     /db_xref="GeneID:121354046"
ORIGIN      
        1 mmrrtkpeve ryvaslqaaa sspreksmkg flfaklyfei keyelakryi stylnvqerd
       61 pkahrflgqi yeaednieka fgcykrsvel nptqkdlvlk iaellcsndi tdgrakywvd
      121 raaklfpgsp aiyrlkeqll dckgedgwnq lfdliqaely arpddvyini rlvalyrsnn
      181 rlkdavlhcq eaekriplhs slewcscvve tfeeyleslq dleydknnwr tikkdhllay
      241 ssfvkltlss rdvqecreal esfdralqsv kpyvsaadel srtyvemkgq lymhagalll
      301 kmaqdnetqw ramcelaalc yllsfqvpkp ksklikgdqt gqdmlemlac drksqsghml
      361 lnlshgkqdf fkeivesfan ksgsfalfds lfesgasrer sfigtddign vstqapvqie
      421 lnkydigair lhsgslqhlv wlglqwnsms vlppmrkwlk qlfhlpqets rletdapesi
      481 clldlevfli gviftsnlql qekfnshysa hqpqflplpi ckqlytekqr swwdavrtll
      541 qrksvpgtaa klrlivqhgi stlrtldkhg lqpaliihwa kslqktginl nsfydqkeyi
      601 grsvyywkkv lpmletikkk rsiseptdpl fkhfhsvdiq vfqvaayeee aqiafamlda
      661 vdgktddali afeaienvvs ywnlamifqr kaeeiendvv lpeeheerkt yllkakyylm
      721 kiiaesssdm svteklpvsl etvrevldtv iqelgencee gslafrngls rtvdsamkhs
      781 tpsptkfsfs ptktykfspk tppqwaedhk silqmicqqv ealknemqem klnnsntnas
      841 hrwpaenygt daipdsyqra qnlheapltv attgpsvfys qspaynsqyl lgtaatnvtp
      901 akppvygmnr ltpqphiysy qpppmhtppl qntsgcmfsq emygpplrfd spgttlispr
      961 taddyynysv pqastnptlp kpgyftnrsv tpptlkpaep kampkfgqpg taegskppls
     1021 tpaqpsqptt fkfkpnfksn dgdftfsspp qvapqplnap fnskeslldl ltsdkplqdd
     1081 ryvdqkpvsd atnssrnifn fsnkhvpgia lrentgqnvh knvgfeksdt fsvqesskpv
     1141 fmasnsdlan rsheteggst hggdedddgp hfdpvvplpd kievktgeed eeeffcnrak
     1201 lfrfdaeske wkergignvk ilkhkvsgkf rllmrrdqvl kicanhyint dmkltpnaas
     1261 dksfvwhald yadelpkpeq lairfktpee amlfkkkfee aqnilkslgs nadtsvaqss
     1321 gtaketanqd tkepnrttsg tmnlgfqflk dgtsgepdsk gtltatsaas sttisfgkda
     1381 qqacssggfg gfgqhllkkd qweckvclvp neamvkncvs cqspnpgmwq thstpmtgya
     1441 slkpsgntvq dkfgspfakk egqwdcsvcq tqneaedvnc cscqspkpqn qpntstpsvq
     1501 asaalglgsi adtskpqkng feglfakkeg qwdcstclvr negsslacia cetpnpsakp
     1561 tgdtlptpaf glksklpeld ggqlgtgfkf gleqgktppf tfqissdtea ksakegfnfs
     1621 mqmpaggfkf giqessknts kkdepskeht tgflksvdek dkkelpsdsg tgfqfqetae
     1681 kekidfvfgq nsststfael akstpregfq fgkkdpnfkg fsgageklfs sqnsktdqka
     1741 ntsadlgekd ddvyktedsd dihfepivqm pekvepftge edekvlysqr vklfrfdpet
     1801 sqwkergvgi lkilknevng kvrilmrreq vlkvcanhwi tttmnlkqls gsdkawmwma
     1861 ndfsdgdakl ehlaakfktp eqaeefkqkf eecqrllldi plqtphklvd tgrtaqliqr
     1921 aeemkcglkd lktfltddkt klseeesgag tnpvctssts dlvikphaes tgptlewdny
     1981 dlreealdds vsssvyaspl asspvrknlf rfgesttgfs fsfksalsps kspakqnqsr
     2041 tsvgtdedsd vtqeeerdgq yfepvvplpd lvevtsgeen eqvvfshrak lyrydkdanq
     2101 wkergigdik ilqnydnkqv rivmrrdqvl klcanhritp dmnlqqmkgs drawvwtacd
     2161 fadgerkvel lavrfklqdv adsfkqifde akhaqeretl itplssrant pkespcgkna
     2221 vavleettre rtdvshgddt seatveaaev sntsetptka vvsppkfvfg sesvksifsn
     2281 eksktftfgn tsatgslfgf sfnpprkseg hipasqntaq kepevsepsk issatqkpvd
     2341 skvdnlpass qdgpsnfsfr ilekaekttv sedvpsdevv ivyeltptpe qraladflkl
     2401 pstffcyknk pgyvsdeddd edyetavkkl ngrlypsdse ekkkgqgpik gvdnllmcvc
     2461 vsdcsvtlfe glakksefnk erecaatlek kpapeekdei kalqvpsasv cgvstdtkgd
     2521 rvedvkseae iqeikeneva sssdlvctsk eeiptpskde vtvlvqsgts sgeshsttet
     2581 vqvsqtlsra edkpvdlstk ksdsddsest qenriisfgf gntaglsfad laskssedfa
     2641 fgskdknfkw antgatvfgd tarkadedeg gsddevvhsd dihfepivsl pevevksgee
     2701 deeilfkera klyrwdrdvt qwkergvgei kilfhtqkky yrvlmrrdqv lkvcanhvit
     2761 kemnlvpsdt snnafiwtat dyadgevkve qfavrfksqe mansfkkmfe ecqlslselq
     2821 kgplslaagl skdtnpvvyf evsaddeplg hitmelfani vprtaenfra lctgekgfgf
     2881 knsrfhrivt dfvcqggdit nhdgtggrsi ygtafedenf ivkhtgpgll smankgrdtn
     2941 nsqffitlkk aehldfkhvv fgfvkdgmdv vkkiesfgsp kglvngrivi tdcgqi
//
LOCUS       XP_041324296            2977 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase RanBP2-like isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324296
VERSION     XP_041324296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2977
                     /product="E3 SUMO-protein ligase RanBP2-like isoform X5"
                     /calculated_mol_wt=332298
     Region          4..223
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          60..90
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <866..>1146
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          1186..1302
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1200,1202..1204,1209..1214,1231,1233,1235..1236,
                     1238,1240..1242,1245,1247,1251,1255,1265,1267,1280,1284)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1398..1427
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1402..1421
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1460..1489
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1464..1483
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1528..1557
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1532..1551
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1778..1894
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1792,1794..1796,1801..1806,1823,1825,1827..1828,
                     1830,1832..1834,1837,1839,1843,1847,1857,1859,1872,1876)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          2076..2192
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2090,2092..2094,2099..2104,2121,2123,2125..2126,
                     2128,2130..2132,2135,2137,2141,2145,2155,2157,2170,2174)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2378..2439
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2464..2517
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2678..2794
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2817..2975
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2867..2868,2873,2924,2926,2934)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..2977
                     /gene="LOC121354046"
                     /coded_by="XM_041468362.1:206..9139"
                     /db_xref="GeneID:121354046"
ORIGIN      
        1 mmrrtkpeve ryvaslqaaa sspreksmkg flfaklyfei keyelakryi stylnvqerd
       61 pkahrflgqi yeaednieka fgcykrsvel nptqkdlvlk iaellcsndi tdgrakywvd
      121 raaklfpgsp aiyrlkeqll dckgedgwnq lfdliqaely arpddvyini rlvalyrsnn
      181 rlkdavlhcq eaekriplhs slewcscvve tfeeyleslq dleydknnwr tikkdhllay
      241 ssfvkltlss rdvqecreal esfdralqsv kpyvsaadel srtyvemkgq lymhagalll
      301 kmaqdnetqw ramcelaalc yllsfqvpkp ksklikgdqt gqdmlemlac drksqsghml
      361 lnlshgkqdf fkeivesfan ksgsfalfds lfesgasrer sfigtddign vstqapvqie
      421 lnkydigair lhsgslqhlv wlglqwnsms vlppmrkwlk qlfhlpqets rletdapesi
      481 clldlevfli gviftsnlql qekfnshysa hqpqflplpi ckqlytekqr swwdavrtll
      541 qrksvpgtaa klrlivqhgi stlrtldkhg lqpaliihwa kslqktginl nsfydqkeyi
      601 grsvyywkkv lpmletikkk rsiseptdpl fkhfhsvdiq vfqvaayeee aqiafamlda
      661 vdgktddali afeaienvvs ywnlamifqr kaeeiendvv lpeeheerkt yllkakyylm
      721 kiiaesssdm svteklpvsl etvrevldtv iqelgencee gslafrngls rtvdsamkhs
      781 tpsptkfsfs ptktykfspk tppqwaedhk silqmicqqv ealknemqem klnnsntnas
      841 hrwpaenygt daipdsyqra qnlheapltv attgpsvfys qspaynsqyl lgtaatnvtp
      901 akppvygmnr ltpqphiysy qpppmhtppl qntsgcmfsq emygpplrfd spgttlispr
      961 taddyynysv pqastnptlp kpgyftnrsv tpptlkpaep kampkfgqpg taegskppls
     1021 tpaqpsqptt fkfkpnfksn dgdftfsspp qvapqplnap fnskeslldl ltsdkplqdd
     1081 ryvdqkpvsd atnssrnifn fsnkhvpgia lrentgqnvh knvgfeksdt fsvqesskpv
     1141 fmasnsdlan rsheteggst hggdedddgp hfdpvvplpd kievktgeed eeeffcnrak
     1201 lfrfdaeske wkergignvk ilkhkvsgkf rllmrrdqvl kicanhyint dmkltpnaas
     1261 dksfvwhald yadelpkpeq lairfktpee amlfkkkfee aqnilkslgs nadtsvaqss
     1321 gtaketanqd tkepnrttsg tmnlgfqflk dgtsgepdsk gtltatsaas sttisfgkda
     1381 qqacssggfg gfgqhllkkd qweckvclvp neamvkncvs cqspnpgmwq thstpmtgya
     1441 slkpsgntvq dkfgspfakk egqwdcsvcq tqneaedvnc cscqspkpqn qpntstpsvq
     1501 asaalglgsi adtskpqkng feglfakkeg qwdcstclvr negsslacia cetpnpsakp
     1561 tgdtlptpaf glksklpeld ggqlgtgfkf gleqgktppf tfqissdtea ksakegfnfs
     1621 mqmpaggfkf giqessknts kkdepskeht tgflksvdek dkkelpsdsg tgfqfqetae
     1681 kekidfvfgq nsststfael akstpregfq fgkkdpnfkg fsgageklfs sqnsktdqka
     1741 ntsadlgekd ddvyktedsd dihfepivqm pekvepftge edekvlysqr vklfrfdpet
     1801 sqwkergvgi lkilknevng kvrilmrreq vlkvcanhwi tttmnlkqls gsdkawmwma
     1861 ndfsdgdakl ehlaakfktp eqaeefkqkf eecqrllldi plqtphklvd tgrtaqliqr
     1921 aeemkcglkd lktfltddkt klseeesgag tnpvctssts dlvikphaes tgptlewdny
     1981 dlreealdds vsssvyaspl asspvrknlf rfgesttgfs fsfksalsps kspakqnqsr
     2041 tsvgtdedsd vtqeeerdgq yfepvvplpd lvevtsgeen eqvvfshrak lyrydkdanq
     2101 wkergigdik ilqnydnkqv rivmrrdqvl klcanhritp dmnlqqmkgs drawvwtacd
     2161 fadgerkvel lavrfklqdv adsfkqifde akhaqeretl itplssrant pkespcgkna
     2221 vavleettre rtdvshgddt seatveaaev sntsetptka vvsppkfvfg sesvksifsn
     2281 eksktftfgn tsatgslfgf sfnpprkseg hipasqntaq kepevsepsk issatqkpvd
     2341 skvdnlpass qdgpsnfsfr ilekaekttv sedvpsdevv ivyeltptpe qraladflkl
     2401 pstffcyknk pgyvsdeddd edyetavkkl ngrlypsdse ekkkgqgpik aglakksefn
     2461 kerecaatle kkpapeekde ikalqvpsas vcgvstdtkg drvedvksea eiqeikenev
     2521 asssdlvcts keeiptpskd evtvlvqsgt ssgeshstte tvqvsqtlsr aedkpvdlst
     2581 kksdsddses tqenriisfg fgntaglsfa dlaskssedf afgskdknfk wantgatvfg
     2641 dtarkadede ggsddevvhs ddihfepivs lpevevksge edeeilfker aklyrwdrdv
     2701 tqwkergvge ikilfhtqkk yyrvlmrrdq vlkvcanhvi tkemnlvpsd tsnnafiwta
     2761 tdyadgevkv eqfavrfksq emansfkkmf eecqlslsel qkgplslaag lskdtnpvvy
     2821 fevsaddepl ghitmelfan ivprtaenfr alctgekgfg fknsrfhriv tdfvcqggdi
     2881 tnhdgtggrs iygtafeden fivkhtgpgl lsmankgrdt nnsqffitlk kaehldfkhv
     2941 vfgfvkdgmd vvkkiesfgs pkglvngriv itdcgqi
//
LOCUS       XP_041324298            2945 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase RanBP2-like isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324298
VERSION     XP_041324298.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468364.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2945
                     /product="E3 SUMO-protein ligase RanBP2-like isoform X6"
                     /calculated_mol_wt=328274
     Region          4..212
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          60..90
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <789..>1069
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          1109..1225
                     /region_name="RanBD1_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 1;
                     cd14684"
                     /db_xref="CDD:270203"
     Site            order(1123,1125..1127,1132..1137,1154,1156,1158..1159,
                     1161,1163..1165,1168,1170,1174,1178,1188,1190,1203,1207)
                     /site_type="other"
                     /note="RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270203"
     Region          1321..1350
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1325..1344
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1383..1412
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1387..1406
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1451..1480
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          1455..1474
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275375"
     Region          1701..1817
                     /region_name="RanBD2_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 2;
                     cd13177"
                     /db_xref="CDD:269998"
     Site            order(1715,1717..1719,1724..1729,1746,1748,1750..1751,
                     1753,1755..1757,1760,1762,1766,1770,1780,1782,1795,1799)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:269998"
     Region          1999..2115
                     /region_name="RanBD3_RanBP2-like"
                     /note="Ran-binding protein 2, Ran binding domain repeat 3;
                     cd14685"
                     /db_xref="CDD:270204"
     Site            order(2013,2015..2017,2022..2027,2044,2046,2048..2049,
                     2051,2053..2055,2058,2060,2064,2068,2078,2080,2093,2097)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270204"
     Region          2327..2388
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2432..2485
                     /region_name="IR1-M"
                     /note="Nup358/RanBP2 E3 ligase domain; pfam12185"
                     /db_xref="CDD:463488"
     Region          2646..2762
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          2785..2943
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(2835..2836,2841,2892,2894,2902)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..2945
                     /gene="LOC121354046"
                     /coded_by="XM_041468364.1:206..9043"
                     /db_xref="GeneID:121354046"
ORIGIN      
        1 mmrrtkpeve ryvaslqaaa sspreksmkg flfaklyfei keyelakryi stylnvqerd
       61 pkahrflgqi yeaednieka fgcykrsvel nptqkdlvlk iaellcsndi tdgrakywvd
      121 raaklfpgsp aiyrlkeyle slqdleydkn nwrtikkdhl layssfvklt lssrdvqecr
      181 ealesfdral qsvkpyvsaa delsrtyvem kgqlymhaga lllkmaqdne tqwramcela
      241 alcyllsfqv pkpksklikg dqtgqdmlem lacdrksqsg hmllnlshgk qdffkeives
      301 fanksgsfal fdslfesgas rersfigtdd ignvstqapv qielnkydig airlhsgslq
      361 hlvwlglqwn smsvlppmrk wlkqlfhlpq etsrletdap esiclldlev fligviftsn
      421 lqlqekfnsh ysahqpqflp lpickqlyte kqrswwdavr tllqrksvpg taaklrlivq
      481 hgistlrtld khglqpalii hwakslqktg inlnsfydqk eyigrsvyyw kkvlpmleti
      541 kkkrsisept dplfkhfhsv diqvfqvaay eeeaqiafam ldavdgktdd aliafeaien
      601 vvsywnlami fqrkaeeien dvvlpeehee rktyllkaky ylmkiiaess sdmsvteklp
      661 vsletvrevl dtviqelgen ceegslafrn glsrtvdsam khstpsptkf sfsptktykf
      721 spktppqwae dhksilqmic qqvealknem qemklnnsnt nashrwpaen ygtdaipdsy
      781 qraqnlheap ltvattgpsv fysqspayns qyllgtaatn vtpakppvyg mnrltpqphi
      841 ysyqpppmht pplqntsgcm fsqemygppl rfdspgttli sprtaddyyn ysvpqastnp
      901 tlpkpgyftn rsvtpptlkp aepkampkfg qpgtaegskp plstpaqpsq pttfkfkpnf
      961 ksndgdftfs sppqvapqpl napfnskesl ldlltsdkpl qddryvdqkp vsdatnssrn
     1021 ifnfsnkhvp gialrentgq nvhknvgfek sdtfsvqess kpvfmasnsd lanrsheteg
     1081 gsthggdedd dgphfdpvvp lpdkievktg eedeeeffcn raklfrfdae skewkergig
     1141 nvkilkhkvs gkfrllmrrd qvlkicanhy intdmkltpn aasdksfvwh aldyadelpk
     1201 peqlairfkt peeamlfkkk feeaqnilks lgsnadtsva qssgtaketa nqdtkepnrt
     1261 tsgtmnlgfq flkdgtsgep dskgtltats aassttisfg kdaqqacssg gfggfgqhll
     1321 kkdqweckvc lvpneamvkn cvscqspnpg mwqthstpmt gyaslkpsgn tvqdkfgspf
     1381 akkegqwdcs vcqtqneaed vnccscqspk pqnqpntstp svqasaalgl gsiadtskpq
     1441 kngfeglfak kegqwdcstc lvrnegssla ciacetpnps akptgdtlpt pafglksklp
     1501 eldggqlgtg fkfgleqgkt ppftfqissd teaksakegf nfsmqmpagg fkfgiqessk
     1561 ntskkdepsk ehttgflksv dekdkkelps dsgtgfqfqe taekekidfv fgqnsststf
     1621 aelakstpre gfqfgkkdpn fkgfsgagek lfssqnsktd qkantsadlg ekdddvykte
     1681 dsddihfepi vqmpekvepf tgeedekvly sqrvklfrfd petsqwkerg vgilkilkne
     1741 vngkvrilmr reqvlkvcan hwitttmnlk qlsgsdkawm wmandfsdgd aklehlaakf
     1801 ktpeqaeefk qkfeecqrll ldiplqtphk lvdtgrtaql iqraeemkcg lkdlktfltd
     1861 dktklseees gagtnpvcts stsdlvikph aestgptlew dnydlreeal ddsvsssvya
     1921 splasspvrk nlfrfgestt gfsfsfksal spskspakqn qsrtsvgtde dsdvtqeeer
     1981 dgqyfepvvp lpdlvevtsg eeneqvvfsh raklyrydkd anqwkergig dikilqnydn
     2041 kqvrivmrrd qvlklcanhr itpdmnlqqm kgsdrawvwt acdfadgerk vellavrfkl
     2101 qdvadsfkqi fdeakhaqer etlitplssr antpkespcg knavavleet trertdvshg
     2161 ddtseatvea aevsntsetp tkavvsppkf vfgsesvksi fsneksktft fgntsatgsl
     2221 fgfsfnpprk seghipasqn taqkepevse pskissatqk pvdskvdnlp assqdgpsnf
     2281 sfrilekgfn fslfksnpma fwtstssmqp dskaekttvs edvpsdevvi vyeltptpeq
     2341 raladflklp stffcyknkp gyvsdeddde dyetavkkln grlypsdsee kkkgqgpikg
     2401 vdnllmcvcv sdcsvtlfeg lakksefnke recaatlekk papeekdeik alqvpsasvc
     2461 gvstdtkgdr vedvkseaei qeikenevas ssdlvctske eiptpskdev tvlvqsgtss
     2521 geshsttetv qvsqtlsrae dkpvdlstkk sdsddsestq enriisfgfg ntaglsfadl
     2581 askssedfaf gskdknfkwa ntgatvfgdt arkadedegg sddevvhsdd ihfepivslp
     2641 evevksgeed eeilfkerak lyrwdrdvtq wkergvgeik ilfhtqkkyy rvlmrrdqvl
     2701 kvcanhvitk emnlvpsdts nnafiwtatd yadgevkveq favrfksqem ansfkkmfee
     2761 cqlslselqk gplslaagls kdtnpvvyfe vsaddeplgh itmelfaniv prtaenfral
     2821 ctgekgfgfk nsrfhrivtd fvcqggditn hdgtggrsiy gtafedenfi vkhtgpglls
     2881 mankgrdtnn sqffitlkka ehldfkhvvf gfvkdgmdvv kkiesfgspk glvngrivit
     2941 dcgqi
//
LOCUS       XP_041324299             474 aa            linear   VRT 06-MAY-2021
DEFINITION  CCR4-NOT transcription complex subunit 11 [Pyrgilauda ruficollis].
ACCESSION   XP_041324299
VERSION     XP_041324299.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468365.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="CCR4-NOT transcription complex subunit 11"
                     /calculated_mol_wt=51966
     Region          335..458
                     /region_name="CNOT11"
                     /note="CCR4-NOT transcription complex subunit 11;
                     pfam10155"
                     /db_xref="CDD:401964"
     CDS             1..474
                     /gene="CNOT11"
                     /coded_by="XM_041468365.1:63..1487"
                     /db_xref="GeneID:121354047"
ORIGIN      
        1 mpggggspap gtqgaaeage aaaggrmsls pkelssllsi vseeaggstf eglssafhhy
       61 fgkaehfrlg svlvlllqqp dllpspaqrl talyllwemy rteplaanpf aavfahllnp
      121 aperggdeae rtplsgflpp itppekffls qlmlapprel fkktprqiaa mdvgnmaqsv
      181 disglqlala erqselptqs kasfpsilsd pdpdssnsgf dssvasqite alvsglkppi
      241 eshfrpefir pppplhiced elawlnpiep dhtiqwdksm cvknstgvei krimakafks
      301 pltspqqtql lgelekdpkl vyhigltpak lpdlvennpl vaiemllklm qssqiteyfs
      361 vlvnmdmslh smevvnrltt avdlppefih lyisncistc eqikdkymqn rlvrlvcvfl
      421 qslirnkiin vqdlfievqa fciefsrire aaglfrllkt ldtgenpset ktsk
//
LOCUS       XP_041324300             406 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF149 [Pyrgilauda ruficollis].
ACCESSION   XP_041324300
VERSION     XP_041324300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..406
                     /product="E3 ubiquitin-protein ligase RNF149"
                     /calculated_mol_wt=43961
     Region          41..187
                     /region_name="PA_GRAIL_like"
                     /note="PA _GRAIL_like: Protease-associated (PA) domain
                     GRAIL-like. This group includes PA domain containing E3
                     (ubiquitin ligases) similar to human GRAIL (gene related
                     to anergy in lymphocytes) protein. Proteins in this group
                     contain a C3H2C3 RING finger. E3...; cd02122"
                     /db_xref="CDD:239037"
     Site            148..150
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239037"
     Region          <181..315
                     /region_name="COG5540"
                     /note="RING-finger-containing ubiquitin ligase
                     [Posttranslational modification, protein turnover,
                     chaperones]"
                     /db_xref="CDD:227827"
     Region          270..317
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(271,274,289,291,294,297,308,311)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438455"
     CDS             1..406
                     /gene="RNF149"
                     /coded_by="XM_041468366.1:145..1365"
                     /db_xref="GeneID:121354048"
ORIGIN      
        1 mvrrarlalv aaalvalgvp pppcaaaral ewytawvsta yveplsnrtv hgstesgryg
       61 dsspkesarg hvgiprgasp rhmegcaadt dydvplppgg rgspegdppt wialvarggc
      121 tfkdkvtnaa rkraaavviy nearfgnstv smshlgtgnt vvimvgypkg ieilepvrrg
      181 ipvtmsivvg trhvqeyisg qsvvfvaiaf itmmiislaw lifyyiqrfl ytgsqfgnqg
      241 hrketkrais qlqlhtvkrg ekgldvdven cavcienykl kdtvrilpck hifhrtcidp
      301 wlldhrtcpm ckldvikalg ywgdpedvle vpipesisgs vsvgslsial qdddrnevse
      361 lsasstnesv lqctslkeda gettalldvd asnnrhgehl sngnsh
//
LOCUS       XP_041324301            1337 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 5B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324301
VERSION     XP_041324301.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468367.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1337
                     /product="eukaryotic translation initiation factor 5B
                     isoform X1"
                     /calculated_mol_wt=148986
     Region          <176..597
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          744..1319
                     /region_name="PRK04004"
                     /note="translation initiation factor IF-2; Validated;
                     cl44330"
                     /db_xref="CDD:457675"
     CDS             1..1337
                     /gene="EIF5B"
                     /coded_by="XM_041468367.1:14..4027"
                     /db_xref="GeneID:121354049"
ORIGIN      
        1 mracvgrscg reprtwgppp vaappsappr lraevspppp apacwgaadp spavlargra
       61 wprgagqgtp haskavsrrv ggsggcrggg qrpllpsggf rlgvgreaea gpgggvavgs
      121 ggaglrsdgv sakddidida laaeiegaga akdqepqksk gkkkkekkkq dfdeddilke
      181 leelsieaqg gkvdreqpst gkvendnees iskqdkkrkg knkkanlend ydseevedkd
      241 kkskkpqkak qdmlsgsddd dhetqlkksk gktqksnkkh dlseedeani kkskergggv
      301 stgesgdesd evsqsrkgqk knqkpksapa aesgddeeep sfkvktvaqk kaekkererk
      361 kreeekaklr kqkekeeleg gkepakpkes lkkteekass evtaipgpge kgetaagtea
      421 ddnegdkkkk dkkkkkgeke ekekekkkgp skatvkamqe alakmkeeee rakreeeeri
      481 rrleeleakr keeerleqer kerkkqkeke rkerlkkegk lltkaqrear araeatlkll
      541 qaqgvevpsk dsvpkkrpiy edkkrkkqqq penkeesvev tspaedavel eapvkeeapl
      601 pvdpeekeee detedagldd weamvsdedg ekeskpvhie vkdvnevdde eeeeeeeeee
      661 eeeseeseds egsededekt sderepdsqa igkqsmekkp skeissdsey dsdddrtkee
      721 raydkakrri ekrraenskn mnteklrapv icvlghvdtg ktkildklrh thvqdseagg
      781 itqqigatnv pleaineqtk mvknfdreni kipgmliidt pghesfsnlr nrgsslcdia
      841 ilvvdimhgl epqtiesinl lkskkcpfiv alnkidrlyd wkkspdtdva vtlkkqkknt
      901 kdefeeraka iivefakqgl naalfyenkd prtfvslvpt sahtgdgmgs liallveltq
      961 tmltkrlaec qelraqvmev kalpgmgtti dvilingrlr egdtiivpgv egpivtqirg
     1021 lllpppmkel rvknqyekhk evvaaqgvki lgkdlektla glpllvahke devpvlkdel
     1081 ihelkqtlna ikleekgvyv qastlgslea lleflktsev pysginigpv hkkdvmkasv
     1141 mlehdpqyav ilafdvrier daqemadslg vrifsaeiiy hlfdaftkyr qdykkqkqee
     1201 fkhiavfpck lkilpqfifn srdpivmgvv veagqvkqgt pmcvpsknfv eigivtsiei
     1261 nhkpvdvakk gqevcvkiep ipgespkmyg rhfeatdilv skisrqsida lkdwfrdemq
     1321 ksdwqlivel kkvfeii
//
LOCUS       XP_041324302            1218 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 5B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324302
VERSION     XP_041324302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468368.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1218
                     /product="eukaryotic translation initiation factor 5B
                     isoform X2"
                     /calculated_mol_wt=137652
     Region          <57..478
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          625..1200
                     /region_name="PRK04004"
                     /note="translation initiation factor IF-2; Validated;
                     cl44330"
                     /db_xref="CDD:457675"
     CDS             1..1218
                     /gene="EIF5B"
                     /coded_by="XM_041468368.1:100..3756"
                     /db_xref="GeneID:121354049"
ORIGIN      
        1 mgkkqknrse esakddidid alaaeiegag aakdqepqks kgkkkkekkk qdfdeddilk
       61 eleelsieaq ggkvdreqps tgkvendnee siskqdkkrk gknkkanlen dydseevedk
      121 dkkskkpqka kqdmlsgsdd ddhetqlkks kgktqksnkk hdlseedean ikkskerggg
      181 vstgesgdes devsqsrkgq kknqkpksap aaesgddeee psfkvktvaq kkaekkerer
      241 kkreeekakl rkqkekeele ggkepakpke slkkteekas sevtaipgpg ekgetaagte
      301 addnegdkkk kdkkkkkgek eekekekkkg pskatvkamq ealakmkeee erakreeeer
      361 irrleeleak rkeeerleqe rkerkkqkek erkerlkkeg klltkaqrea raraeatlkl
      421 lqaqgvevps kdsvpkkrpi yedkkrkkqq qpenkeesve vtspaedave leapvkeeap
      481 lpvdpeekee edetedagld dweamvsded gekeskpvhi evkdvnevdd eeeeeeeeee
      541 eeeeseesed segsededek tsderepdsq aigkqsmekk pskeissdse ydsdddrtke
      601 eraydkakrr iekrraensk nmnteklrap vicvlghvdt gktkildklr hthvqdseag
      661 gitqqigatn vpleaineqt kmvknfdren ikipgmliid tpghesfsnl rnrgsslcdi
      721 ailvvdimhg lepqtiesin llkskkcpfi valnkidrly dwkkspdtdv avtlkkqkkn
      781 tkdefeerak aiivefakqg lnaalfyenk dprtfvslvp tsahtgdgmg sliallvelt
      841 qtmltkrlae cqelraqvme vkalpgmgtt idvilingrl regdtiivpg vegpivtqir
      901 glllpppmke lrvknqyekh kevvaaqgvk ilgkdlektl aglpllvahk edevpvlkde
      961 lihelkqtln aikleekgvy vqastlgsle alleflktse vpysginigp vhkkdvmkas
     1021 vmlehdpqya vilafdvrie rdaqemadsl gvrifsaeii yhlfdaftky rqdykkqkqe
     1081 efkhiavfpc klkilpqfif nsrdpivmgv vveagqvkqg tpmcvpsknf veigivtsie
     1141 inhkpvdvak kgqevcvkie pipgespkmy grhfeatdil vskisrqsid alkdwfrdem
     1201 qksdwqlive lkkvfeii
//
LOCUS       XP_041324303            1255 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein REV1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324303
VERSION     XP_041324303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1255
                     /product="DNA repair protein REV1 isoform X1"
                     /calculated_mol_wt=138086
     Region          51..134
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          352..834
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(355..357,359..363,365..366,373,426..431,451,
                     519..520,523,526,532..533,535,577..578,580..581,635,
                     659..666,669,695..696,720..728,762,783..785,789..793,795)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(361,426..431,519..520,523,526,532,580..581,635)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          938..971
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(940..942,946..948,950..951,954..956,958..959,962,
                     966)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1014..1049
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(1018..1020,1024..1026,1028..1029,1032..1034,
                     1036..1037,1040,1044)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1161..1254
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(1162..1167,1175..1176,1179,1183,1185..1187,
                     1189..1190,1193..1194)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..1255
                     /gene="REV1"
                     /coded_by="XM_041468369.1:308..4075"
                     /db_xref="GeneID:121354050"
ORIGIN      
        1 mrrggwrkra adgdgwgiwg gymsakvkkl eeqfrsdsai qqqrdgnsss ifsgvaiyvn
       61 gltdpsadel rrlmmlhggq yhvyysrskt thiiatnlpn akikelkgek vvrpewives
      121 ikagrllshi pyqlytkqsg vqkglnfnsi rkpedavpgp sntakdlnrv nhikkyemen
      181 eitpnginsw neeeeeesvd fgfteleeil pirkqngiqs hkdstalfng hthastsalk
      241 tqdclvpssn gvagrlspgp vqeegktdkg mvdfrdctmq qlqqsnkntd fswsphrtms
      301 nsssssflhs nakingahhs tvqgpsstks tsgpapskaa slpvskpsdc sfisdfyshs
      361 rlhhistwkc eltefvnslq rknsgvfpgr ekikkwktgr salktdtgnv svassakpqs
      421 cimhvdmdcf fvsvairnrp dlkgkpvavt snrgtgkall rpganpqleq qyyqkkllng
      481 kaeirvpdql dssvwehtds thvngadfnl tvlsmaeias csyearqvgi kngmffgqak
      541 klcpnlqavs ydfdaykeva rtvyeilasy thnieavscd ealvditdil tetrltpdef
      601 anairteikd qtkctasvgm gsnillarma trkakpdgqy hlkpeevddf irgqlvtslp
      661 gvgrtmeskl aslgiktcgd lqcasmsklq kefgpktgqm lyrfcrgldd rpvrtekerk
      721 svsaeinygi rftqpkeaea fllslseeiq rrleaagmkg krltlkimvr kagapvepak
      781 ygghgicdni artvtldhat dsakiigket lnmfhtmkln isdmrgvgiq vqqlvpiskt
      841 tsalstvqsg hlpgashsvi dlfhvqkakk hseeepkevf vaamdleiss nsrtctflps
      901 rgtsvtpgvs snannaepav kwngvhspis vksrlnlsie vpsasqldks vlealppdlr
      961 eqveqictiq qgesygeskk epingcntal lsqpigtvll qipelqepnt nmginvialp
     1021 afsqvdpevf salpaelqae lkdaydqrqk qseqqpantl vsknpflhlk nttmknkkki
     1081 rkknpvspvk kiqsplknkl igspaknvpa asgspqklid gflkqegtaa qaeavpstsd
     1141 spgpsalqte qqpgsfrpqa pnlagavefn dvktllkewi ttisdpmeed ilqvvkyctd
     1201 lieekdlekl dlvvkymkrl mqssvesvwn mafdfildnv qvvlqqtygs tlkvi
//
LOCUS       XP_041324304            1255 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein REV1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324304
VERSION     XP_041324304.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468370.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1255
                     /product="DNA repair protein REV1 isoform X1"
                     /calculated_mol_wt=138086
     Region          51..134
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          352..834
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(355..357,359..363,365..366,373,426..431,451,
                     519..520,523,526,532..533,535,577..578,580..581,635,
                     659..666,669,695..696,720..728,762,783..785,789..793,795)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(361,426..431,519..520,523,526,532,580..581,635)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          938..971
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(940..942,946..948,950..951,954..956,958..959,962,
                     966)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1014..1049
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(1018..1020,1024..1026,1028..1029,1032..1034,
                     1036..1037,1040,1044)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1161..1254
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(1162..1167,1175..1176,1179,1183,1185..1187,
                     1189..1190,1193..1194)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..1255
                     /gene="REV1"
                     /coded_by="XM_041468370.1:13..3780"
                     /db_xref="GeneID:121354050"
ORIGIN      
        1 mrrggwrkra adgdgwgiwg gymsakvkkl eeqfrsdsai qqqrdgnsss ifsgvaiyvn
       61 gltdpsadel rrlmmlhggq yhvyysrskt thiiatnlpn akikelkgek vvrpewives
      121 ikagrllshi pyqlytkqsg vqkglnfnsi rkpedavpgp sntakdlnrv nhikkyemen
      181 eitpnginsw neeeeeesvd fgfteleeil pirkqngiqs hkdstalfng hthastsalk
      241 tqdclvpssn gvagrlspgp vqeegktdkg mvdfrdctmq qlqqsnkntd fswsphrtms
      301 nsssssflhs nakingahhs tvqgpsstks tsgpapskaa slpvskpsdc sfisdfyshs
      361 rlhhistwkc eltefvnslq rknsgvfpgr ekikkwktgr salktdtgnv svassakpqs
      421 cimhvdmdcf fvsvairnrp dlkgkpvavt snrgtgkall rpganpqleq qyyqkkllng
      481 kaeirvpdql dssvwehtds thvngadfnl tvlsmaeias csyearqvgi kngmffgqak
      541 klcpnlqavs ydfdaykeva rtvyeilasy thnieavscd ealvditdil tetrltpdef
      601 anairteikd qtkctasvgm gsnillarma trkakpdgqy hlkpeevddf irgqlvtslp
      661 gvgrtmeskl aslgiktcgd lqcasmsklq kefgpktgqm lyrfcrgldd rpvrtekerk
      721 svsaeinygi rftqpkeaea fllslseeiq rrleaagmkg krltlkimvr kagapvepak
      781 ygghgicdni artvtldhat dsakiigket lnmfhtmkln isdmrgvgiq vqqlvpiskt
      841 tsalstvqsg hlpgashsvi dlfhvqkakk hseeepkevf vaamdleiss nsrtctflps
      901 rgtsvtpgvs snannaepav kwngvhspis vksrlnlsie vpsasqldks vlealppdlr
      961 eqveqictiq qgesygeskk epingcntal lsqpigtvll qipelqepnt nmginvialp
     1021 afsqvdpevf salpaelqae lkdaydqrqk qseqqpantl vsknpflhlk nttmknkkki
     1081 rkknpvspvk kiqsplknkl igspaknvpa asgspqklid gflkqegtaa qaeavpstsd
     1141 spgpsalqte qqpgsfrpqa pnlagavefn dvktllkewi ttisdpmeed ilqvvkyctd
     1201 lieekdlekl dlvvkymkrl mqssvesvwn mafdfildnv qvvlqqtygs tlkvi
//
LOCUS       XP_041324305            1186 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein REV1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324305
VERSION     XP_041324305.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468371.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1186
                     /product="DNA repair protein REV1 isoform X2"
                     /calculated_mol_wt=129903
     Region          51..134
                     /region_name="BRCT_Rev1"
                     /note="BRCT domain of DNA repair protein Rev1 and similar
                     proteins; cd17719"
                     /db_xref="CDD:349351"
     Region          352..835
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Site            order(355..357,359..363,365..366,373,426..431,451,
                     520..521,524,527,533..534,536,578..579,581..582,636,
                     660..667,670,696..697,721..729,763,784..786,790..794,796)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176455"
     Site            order(361,426..431,520..521,524,527,533,581..582,636)
                     /site_type="active"
                     /db_xref="CDD:176455"
     Region          939..972
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(941..943,947..949,951..952,955..957,959..960,963,
                     967)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1015..1050
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(1019..1021,1025..1027,1029..1030,1033..1035,
                     1037..1038,1041,1045)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          1162..>1186
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cl17091"
                     /db_xref="CDD:473063"
     CDS             1..1186
                     /gene="REV1"
                     /coded_by="XM_041468371.1:308..3868"
                     /db_xref="GeneID:121354050"
ORIGIN      
        1 mrrggwrkra adgdgwgiwg gymsakvkkl eeqfrsdsai qqqrdgnsss ifsgvaiyvn
       61 gltdpsadel rrlmmlhggq yhvyysrskt thiiatnlpn akikelkgek vvrpewives
      121 ikagrllshi pyqlytkqsg vqkglnfnsi rkpedavpgp sntakdlnrv nhikkyemen
      181 eitpnginsw neeeeeesvd fgfteleeil pirkqngiqs hkdstalfng hthastsalk
      241 tqdclvpssn gvagrlspgp vqeegktdkg mvdfrdctmq qlqqsnkntd fswsphrtms
      301 nsssssflhs nakingahhs tvqgpsstks tsgpapskaa slpvskpsdc sfisdfyshs
      361 rlhhistwkc eltefvnslq rknsgvfpgr ekikkwktgr salktdtgnv svassakpqs
      421 cimhvdmdcf fvsvairnrp dlkgkpvavt snrgtgkall rpganpqleq qyyqkkllng
      481 kaaeirvpdq ldssvwehtd sthvngadfn ltvlsmaeia scsyearqvg ikngmffgqa
      541 kklcpnlqav sydfdaykev artvyeilas ythnieavsc dealvditdi ltetrltpde
      601 fanairteik dqtkctasvg mgsnillarm atrkakpdgq yhlkpeevdd firgqlvtsl
      661 pgvgrtmesk laslgiktcg dlqcasmskl qkefgpktgq mlyrfcrgld drpvrteker
      721 ksvsaeinyg irftqpkeae afllslseei qrrleaagmk gkrltlkimv rkagapvepa
      781 kygghgicdn iartvtldha tdsakiigke tlnmfhtmkl nisdmrgvgi qvqqlvpisk
      841 ttsalstvqs ghlpgashsv idlfhvqkak khseeepkev fvaamdleis snsrtctflp
      901 srgtsvtpgv ssnannaepa vkwngvhspi svksrlnlsi evpsasqldk svlealppdl
      961 reqveqicti qqgesygesk kepingcnta llsqpigtvl lqipelqepn tnmginvial
     1021 pafsqvdpev fsalpaelqa elkdaydqrq kqseqqpant lvsknpflhl knttmknkkk
     1081 irkknpvspv kkiqsplknk ligspaknvp aasgspqkli dgflkqegta aqaeavpsts
     1141 dspgpsalqt eqqpgsfrpq apnlagavef ndvktllkew ittisg
//
LOCUS       XP_041324306             797 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein REV1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324306
VERSION     XP_041324306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="DNA repair protein REV1 isoform X3"
                     /calculated_mol_wt=87479
     Region          <57..376
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Region          480..513
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(482..484,488..490,492..493,496..498,500..501,504,
                     508)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          556..591
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(560..562,566..568,570..571,574..576,578..579,582,
                     586)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          703..796
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(704..709,717..718,721,725,727..729,731..732,
                     735..736)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..797
                     /gene="REV1"
                     /coded_by="XM_041468372.1:153..2546"
                     /db_xref="GeneID:121354050"
ORIGIN      
        1 mwkkptipvk idkmtassqa raqeeirvpd qldssvweht dsthvngadf nltvlsmaei
       61 ascsyearqv gikngmffgq akklcpnlqa vsydfdayke vartvyeila sythnieavs
      121 cdealvditd iltetrltpd efanairtei kdqtkctasv gmgsnillar matrkakpdg
      181 qyhlkpeevd dfirgqlvts lpgvgrtmes klaslgiktc gdlqcasmsk lqkefgpktg
      241 qmlyrfcrgl ddrpvrteke rksvsaeiny girftqpkea eafllslsee iqrrleaagm
      301 kgkrltlkim vrkagapvep akygghgicd niartvtldh atdsakiigk etlnmfhtmk
      361 lnisdmrgvg iqvqqlvpis kttsalstvq sghlpgashs vidlfhvqka kkhseeepke
      421 vfvaamdlei ssnsrtctfl psrgtsvtpg vssnannaep avkwngvhsp isvksrlnls
      481 ievpsasqld ksvlealppd lreqveqict iqqgesyges kkepingcnt allsqpigtv
      541 llqipelqep ntnmginvia lpafsqvdpe vfsalpaelq aelkdaydqr qkqseqqpan
      601 tlvsknpflh lknttmknkk kirkknpvsp vkkiqsplkn kligspaknv paasgspqkl
      661 idgflkqegt aaqaeavpst sdspgpsalq teqqpgsfrp qapnlagave fndvktllke
      721 wittisdpme edilqvvkyc tdlieekdle kldlvvkymk rlmqssvesv wnmafdfild
      781 nvqvvlqqty gstlkvi
//
LOCUS       XP_041324307             741 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein REV1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324307
VERSION     XP_041324307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="DNA repair protein REV1 isoform X4"
                     /calculated_mol_wt=81187
     Region          <1..320
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Region          424..457
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(426..428,432..434,436..437,440..442,444..445,448,
                     452)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          500..535
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(504..506,510..512,514..515,518..520,522..523,526,
                     530)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          647..740
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(648..653,661..662,665,669,671..673,675..676,
                     679..680)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..741
                     /gene="REV1"
                     /coded_by="XM_041468373.1:386..2611"
                     /db_xref="GeneID:121354050"
ORIGIN      
        1 maeiascsye arqvgikngm ffgqakklcp nlqavsydfd aykevartvy eilasythni
       61 eavscdealv ditdiltetr ltpdefanai rteikdqtkc tasvgmgsni llarmatrka
      121 kpdgqyhlkp eevddfirgq lvtslpgvgr tmesklaslg iktcgdlqca smsklqkefg
      181 pktgqmlyrf crglddrpvr tekerksvsa einygirftq pkeaeaflls lseeiqrrle
      241 aagmkgkrlt lkimvrkaga pvepakyggh gicdniartv tldhatdsak iigketlnmf
      301 htmklnisdm rgvgiqvqql vpiskttsal stvqsghlpg ashsvidlfh vqkakkhsee
      361 epkevfvaam dleissnsrt ctflpsrgts vtpgvssnan naepavkwng vhspisvksr
      421 lnlsievpsa sqldksvlea lppdlreqve qictiqqges ygeskkepin gcntallsqp
      481 igtvllqipe lqepntnmgi nvialpafsq vdpevfsalp aelqaelkda ydqrqkqseq
      541 qpantlvskn pflhlknttm knkkkirkkn pvspvkkiqs plknkligsp aknvpaasgs
      601 pqklidgflk qegtaaqaea vpstsdspgp salqteqqpg sfrpqapnla gavefndvkt
      661 llkewittis dpmeedilqv vkyctdliee kdlekldlvv kymkrlmqss vesvwnmafd
      721 fildnvqvvl qqtygstlkv i
//
LOCUS       XP_041324308             741 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein REV1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324308
VERSION     XP_041324308.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468374.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="DNA repair protein REV1 isoform X4"
                     /calculated_mol_wt=81187
     Region          <1..320
                     /region_name="PolY_Rev1"
                     /note="DNA polymerase Rev1; cd01701"
                     /db_xref="CDD:176455"
     Region          424..457
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(426..428,432..434,436..437,440..442,444..445,448,
                     452)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          500..535
                     /region_name="Rev1_UBM2"
                     /note="Ubiquitin-Binding Motif 2 (UBM2) of Y-family
                     polymerase Rev1; cd19318"
                     /db_xref="CDD:412037"
     Site            order(504..506,510..512,514..515,518..520,522..523,526,
                     530)
                     /site_type="other"
                     /note="ubiquitin binding interface [polypeptide binding]"
                     /db_xref="CDD:412037"
     Region          647..740
                     /region_name="Rev1_C"
                     /note="C-terminal domain of the Y-family polymerase Rev1;
                     cd12145"
                     /db_xref="CDD:213388"
     Site            order(648..653,661..662,665,669,671..673,675..676,
                     679..680)
                     /site_type="other"
                     /note="Polymerase eta interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:213388"
     CDS             1..741
                     /gene="REV1"
                     /coded_by="XM_041468374.1:1003..3228"
                     /db_xref="GeneID:121354050"
ORIGIN      
        1 maeiascsye arqvgikngm ffgqakklcp nlqavsydfd aykevartvy eilasythni
       61 eavscdealv ditdiltetr ltpdefanai rteikdqtkc tasvgmgsni llarmatrka
      121 kpdgqyhlkp eevddfirgq lvtslpgvgr tmesklaslg iktcgdlqca smsklqkefg
      181 pktgqmlyrf crglddrpvr tekerksvsa einygirftq pkeaeaflls lseeiqrrle
      241 aagmkgkrlt lkimvrkaga pvepakyggh gicdniartv tldhatdsak iigketlnmf
      301 htmklnisdm rgvgiqvqql vpiskttsal stvqsghlpg ashsvidlfh vqkakkhsee
      361 epkevfvaam dleissnsrt ctflpsrgts vtpgvssnan naepavkwng vhspisvksr
      421 lnlsievpsa sqldksvlea lppdlreqve qictiqqges ygeskkepin gcntallsqp
      481 igtvllqipe lqepntnmgi nvialpafsq vdpevfsalp aelqaelkda ydqrqkqseq
      541 qpantlvskn pflhlknttm knkkkirkkn pvspvkkiqs plknkligsp aknvpaasgs
      601 pqklidgflk qegtaaqaea vpstsdspgp salqteqqpg sfrpqapnla gavefndvkt
      661 llkewittis dpmeedilqv vkyctdliee kdlekldlvv kymkrlmqss vesvwnmafd
      721 fildnvqvvl qqtygstlkv i
//
LOCUS       XP_041324309             226 aa            linear   VRT 06-MAY-2021
DEFINITION  thioredoxin domain-containing protein 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041324309
VERSION     XP_041324309.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468375.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..226
                     /product="thioredoxin domain-containing protein 9"
                     /calculated_mol_wt=26253
     Region          68..180
                     /region_name="Phd_like_TxnDC9"
                     /note="Phosducin (Phd)-like family, Thioredoxin (TRX)
                     domain containing protein 9 (TxnDC9) subfamily; composed
                     of predominantly uncharacterized eukaryotic proteins,
                     containing a TRX-like domain without the redox active CXXC
                     motif. The gene name for the human...; cd02989"
                     /db_xref="CDD:239287"
     CDS             1..226
                     /gene="TXNDC9"
                     /coded_by="XM_041468375.1:160..840"
                     /db_xref="GeneID:121354052"
ORIGIN      
        1 maadtpvdil qkvleneilq stkvveehld aeiqkldqmd edelerlkqr rlealkksqq
       61 qkqewlskgh geyreipser dffqevkesk nvvchfyrdt tfrcqimdkh ltvlakkhie
      121 tkflklnaek spflcerlri kviptlalik dgktqdyvvg ftdlgntddf ttetlewrlg
      181 cadvinysgn lmeppfqsqk kygtsftkld kktirgkiyd sdsddd
//
LOCUS       XP_041324311             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324311
VERSION     XP_041324311.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468377.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468377.1:633..3584"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324312             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324312
VERSION     XP_041324312.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468378.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468378.1:483..3434"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324313             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324313
VERSION     XP_041324313.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468379.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468379.1:400..3351"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324314             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324314
VERSION     XP_041324314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468380.1:400..3351"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324315             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324315
VERSION     XP_041324315.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468381.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468381.1:336..3287"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324316             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324316
VERSION     XP_041324316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468382.1:487..3438"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324317             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324317
VERSION     XP_041324317.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468383.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468383.1:300..3251"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324318             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324318
VERSION     XP_041324318.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468384.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468384.1:283..3234"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324319             983 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324319
VERSION     XP_041324319.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468385.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X1"
                     /calculated_mol_wt=110365
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..983
                     /gene="INPP4A"
                     /coded_by="XM_041468385.1:171..3122"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhsy eecctstgsq siiyipqdiv rakeiiaqin
      421 tlktqvsyya erlsraakdr sanglertla iladktrqlv tvcdckllan sihglnaarp
      481 dyiaskaspt sgegeqvmlr ndqdtlvarw tgrnsrsslq vdwheeewek vwlnvdksle
      541 ciiqrvdkll qkerlqsdsc edvfqcdvss tskkgnrdsr aywinpedln etssssspss
      601 ssppssstps cachslktnc sptpeesapg ewsealypll ttltdcvamm sdkakkamvf
      661 llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr qlytigllaq
      721 fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn rdgfnvripl
      781 psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm eslvrlnsyf
      841 eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic rrlngvrfts
      901 cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk nvgcrkyafn
      961 slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324321             977 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324321
VERSION     XP_041324321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468387.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..977
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..977
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X2"
                     /calculated_mol_wt=109651
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..977
                     /gene="INPP4A"
                     /coded_by="XM_041468387.1:569..3502"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhts tgsqsiiyip qdivrakeii aqintlktqv
      421 syyaerlsra akdrsangle rtlailadkt rqlvtvcdck llansihgln aarpdyiask
      481 asptsgegeq vmlrndqdtl varwtgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqkerlq sdscedvfqc dvsstskkgn rdsraywinp edlnetssss spssssppss
      601 stpscachsl ktncsptpee sapgewseal ypllttltdc vammsdkakk amvfllmqds
      661 aptiglclsl qyrrdvvfcq tltalicgfi iklrnclhdd gflrqlytig llaqfeslls
      721 tygeelamle dmslgimdlr nvtfkvtqat sntstdmlpv itgnrdgfnv riplpsalfd
      781 llpreiqsgm llrvqpvlfn vgineqqtla ekfgdtslqe iinmeslvrl nsyfeqfkev
      841 lpddclprsr sqtclpellr flgqnvhark nknvdilwqa aeicrrlngv rftscksakd
      901 rtamsitleq clilqhehgm apqvftqale cmrsegcrre ntmknvgcrk yafnslqlka
      961 fpkyyrppeg tygkvet
//
LOCUS       XP_041324322             933 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324322
VERSION     XP_041324322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..933
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..933
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X3"
                     /calculated_mol_wt=105054
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..933
                     /gene="INPP4A"
                     /coded_by="XM_041468388.1:568..3369"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhts tgsqsiiyip qdivrakeii aqintlktqv
      421 syyaerlsra akdrsangle rtlailadkt rqlvtvcdck llansihgln aarpdyiask
      481 asptsgegeq vmlrndqdtl varwtgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqkerlq sdscedvfqc dvsstskkdc sptpeesapg ewsealypll ttltdcvamm
      601 sdkakkamvf llmqdsapti glclslqyrr dvvfcqtlta licgfiiklr nclhddgflr
      661 qlytigllaq fesllstyge elamledmsl gimdlrnvtf kvtqatsnts tdmlpvitgn
      721 rdgfnvripl psalfdllpr eiqsgmllrv qpvlfnvgin eqqtlaekfg dtslqeiinm
      781 eslvrlnsyf eqfkevlpdd clprsrsqtc lpellrflgq nvharknknv dilwqaaeic
      841 rrlngvrfts cksakdrtam sitleqclil qhehgmapqv ftqalecmrs egcrrentmk
      901 nvgcrkyafn slqlkafpky yrppegtygk vet
//
LOCUS       XP_041324323             922 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol polyphosphate-4-phosphatase type I A isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324323
VERSION     XP_041324323.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468389.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..922
                     /product="inositol polyphosphate-4-phosphatase type I A
                     isoform X4"
                     /calculated_mol_wt=103940
     Region          44..157
                     /region_name="C2A_Copine"
                     /note="C2 domain first repeat in Copine; cd04048"
                     /db_xref="CDD:176013"
     Site            order(59,65,121,123,131)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176013"
     CDS             1..922
                     /gene="INPP4A"
                     /coded_by="XM_041468389.1:568..3336"
                     /db_xref="GeneID:121354053"
ORIGIN      
        1 mtarehsprh gaksrtvqra stidvtsdmv glsltgniqd pdepilefsl acselltpsl
       61 drkpnsfvav svttppqafw tkhaqteiie gtsnpiflss iaffqdslin qmtqiklsvy
      121 dvkdrsqgtm yllgsgtftv kdllqekyhr lhitlrsaes drvgnitvig wqmeeksdqr
      181 ppvtrspdti ngrtvlpvde slteslgirs kyaslrkdal lksvfggaic rmyrfpttdg
      241 nhlrileqma esilslhipr qfvkllleed aarvceleel gelspcwesl rrqivtqyqt
      301 iiltyqenlt dlhqykgpsf kasslkadkk lefvptnlhi qrmrvqddgg sdqnydivti
      361 gapaahcqgf ksgglrkklh kfeeakkhts tgsqsiiyip qdivrakeii aqintlktqv
      421 syyaerlsra akdrsangle rtlailadkt rqlvtvcdck llansihgln aarpdyiask
      481 asptsgegeq vmlrndqdtl varwtgrnsr sslqvdwhee ewekvwlnvd ksleciiqrv
      541 dkllqkerlq sdscedvfqc dvsstskkge wsealypllt tltdcvamms dkakkamvfl
      601 lmqdsaptig lclslqyrrd vvfcqtltal icgfiiklrn clhddgflrq lytigllaqf
      661 esllstygee lamledmslg imdlrnvtfk vtqatsntst dmlpvitgnr dgfnvriplp
      721 salfdllpre iqsgmllrvq pvlfnvgine qqtlaekfgd tslqeiinme slvrlnsyfe
      781 qfkevlpddc lprsrsqtcl pellrflgqn vharknknvd ilwqaaeicr rlngvrftsc
      841 ksakdrtams itleqclilq hehgmapqvf tqalecmrse gcrrentmkn vgcrkyafns
      901 lqlkafpkyy rppegtygkv et
//
LOCUS       XP_041324324             880 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-protein ligase E3A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324324
VERSION     XP_041324324.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468390.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..880
                     /product="ubiquitin-protein ligase E3A isoform X1"
                     /calculated_mol_wt=100892
     Region          27..81
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          528..878
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(534,567,578,635,813,842..843,846..850,870,877)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(663,666..667,669..670,673,681,683,687..688,690,696,
                     701,718,722)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..880
                     /gene="UBE3A"
                     /coded_by="XM_041468390.1:393..3035"
                     /db_xref="GeneID:121354055"
ORIGIN      
        1 matackrspg ephseniets rmkraaakhl ieryyhqlte gcgneactne fcascptflr
       61 mdnnaaaika lelykinakl cdphpskkgt ssaylennsk gahnnsctdr kmnkkemqgp
      121 rddfkdvtfl tedkiyeile lcrekedysp lirvigrvfs saealvqsfr ktkqhtkeel
      181 kslqgkdedk dedekekaac saaameedsg assssssrig entqgdnnlq klgpdevsvd
      241 ieavrrvydr llsnekieta flnalvylsp nvecdltyhn vysrdpnyln lfiivmengn
      301 lhspeylema lplfckamsk lplaaqaklv rlwskyradq irrmmetfqq litykvisne
      361 fnsrnlvndd davvaaskcl kmvyyanvvg gdvdtdhnee edeepipess eltlqellge
      421 errnkkgprv dpletelgvk tidcrkplip feefinepln dvlemdkdyt ffkvetenkf
      481 sfmtcpfiln avtknlglyy dnrirmyser ritvlyslvq gqqlnpylrl kvrrdhiidd
      541 alvrlemiam enpadlkkql yvefegeqgv deggvskeff qlvveeifnp digmftydes
      601 tklfwfnpss fetegqftli givlglaiyn ncildvhfpm vvyrklmgkk gtfrdladsh
      661 pvlyqslrdl leyegsvedd mmitfqisht dlfgnpmmhd lkengdkipi tnenrkefvn
      721 lyadyilnks vekqfkafrr gfhmvtnesp lkylfrpeei ellicgsrnl dfqaleette
      781 ydggytrdsl iirefweivh sftdeqkrlf lqfttgtdra pvgglgklkm iiakngpdte
      841 rlptshtcfn vlllpeyssk eklkerllka ityakgfgml
//
LOCUS       XP_041324325             880 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-protein ligase E3A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324325
VERSION     XP_041324325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468391.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..880
                     /product="ubiquitin-protein ligase E3A isoform X1"
                     /calculated_mol_wt=100892
     Region          27..81
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          528..878
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(534,567,578,635,813,842..843,846..850,870,877)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(663,666..667,669..670,673,681,683,687..688,690,696,
                     701,718,722)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..880
                     /gene="UBE3A"
                     /coded_by="XM_041468391.1:540..3182"
                     /db_xref="GeneID:121354055"
ORIGIN      
        1 matackrspg ephseniets rmkraaakhl ieryyhqlte gcgneactne fcascptflr
       61 mdnnaaaika lelykinakl cdphpskkgt ssaylennsk gahnnsctdr kmnkkemqgp
      121 rddfkdvtfl tedkiyeile lcrekedysp lirvigrvfs saealvqsfr ktkqhtkeel
      181 kslqgkdedk dedekekaac saaameedsg assssssrig entqgdnnlq klgpdevsvd
      241 ieavrrvydr llsnekieta flnalvylsp nvecdltyhn vysrdpnyln lfiivmengn
      301 lhspeylema lplfckamsk lplaaqaklv rlwskyradq irrmmetfqq litykvisne
      361 fnsrnlvndd davvaaskcl kmvyyanvvg gdvdtdhnee edeepipess eltlqellge
      421 errnkkgprv dpletelgvk tidcrkplip feefinepln dvlemdkdyt ffkvetenkf
      481 sfmtcpfiln avtknlglyy dnrirmyser ritvlyslvq gqqlnpylrl kvrrdhiidd
      541 alvrlemiam enpadlkkql yvefegeqgv deggvskeff qlvveeifnp digmftydes
      601 tklfwfnpss fetegqftli givlglaiyn ncildvhfpm vvyrklmgkk gtfrdladsh
      661 pvlyqslrdl leyegsvedd mmitfqisht dlfgnpmmhd lkengdkipi tnenrkefvn
      721 lyadyilnks vekqfkafrr gfhmvtnesp lkylfrpeei ellicgsrnl dfqaleette
      781 ydggytrdsl iirefweivh sftdeqkrlf lqfttgtdra pvgglgklkm iiakngpdte
      841 rlptshtcfn vlllpeyssk eklkerllka ityakgfgml
//
LOCUS       XP_041324327             880 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-protein ligase E3A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324327
VERSION     XP_041324327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..880
                     /product="ubiquitin-protein ligase E3A isoform X1"
                     /calculated_mol_wt=100892
     Region          27..81
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          528..878
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(534,567,578,635,813,842..843,846..850,870,877)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(663,666..667,669..670,673,681,683,687..688,690,696,
                     701,718,722)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..880
                     /gene="UBE3A"
                     /coded_by="XM_041468393.1:513..3155"
                     /db_xref="GeneID:121354055"
ORIGIN      
        1 matackrspg ephseniets rmkraaakhl ieryyhqlte gcgneactne fcascptflr
       61 mdnnaaaika lelykinakl cdphpskkgt ssaylennsk gahnnsctdr kmnkkemqgp
      121 rddfkdvtfl tedkiyeile lcrekedysp lirvigrvfs saealvqsfr ktkqhtkeel
      181 kslqgkdedk dedekekaac saaameedsg assssssrig entqgdnnlq klgpdevsvd
      241 ieavrrvydr llsnekieta flnalvylsp nvecdltyhn vysrdpnyln lfiivmengn
      301 lhspeylema lplfckamsk lplaaqaklv rlwskyradq irrmmetfqq litykvisne
      361 fnsrnlvndd davvaaskcl kmvyyanvvg gdvdtdhnee edeepipess eltlqellge
      421 errnkkgprv dpletelgvk tidcrkplip feefinepln dvlemdkdyt ffkvetenkf
      481 sfmtcpfiln avtknlglyy dnrirmyser ritvlyslvq gqqlnpylrl kvrrdhiidd
      541 alvrlemiam enpadlkkql yvefegeqgv deggvskeff qlvveeifnp digmftydes
      601 tklfwfnpss fetegqftli givlglaiyn ncildvhfpm vvyrklmgkk gtfrdladsh
      661 pvlyqslrdl leyegsvedd mmitfqisht dlfgnpmmhd lkengdkipi tnenrkefvn
      721 lyadyilnks vekqfkafrr gfhmvtnesp lkylfrpeei ellicgsrnl dfqaleette
      781 ydggytrdsl iirefweivh sftdeqkrlf lqfttgtdra pvgglgklkm iiakngpdte
      841 rlptshtcfn vlllpeyssk eklkerllka ityakgfgml
//
LOCUS       XP_041324328             880 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-protein ligase E3A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324328
VERSION     XP_041324328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..880
                     /product="ubiquitin-protein ligase E3A isoform X1"
                     /calculated_mol_wt=100892
     Region          27..81
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          528..878
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(534,567,578,635,813,842..843,846..850,870,877)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(663,666..667,669..670,673,681,683,687..688,690,696,
                     701,718,722)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..880
                     /gene="UBE3A"
                     /coded_by="XM_041468394.1:301..2943"
                     /db_xref="GeneID:121354055"
ORIGIN      
        1 matackrspg ephseniets rmkraaakhl ieryyhqlte gcgneactne fcascptflr
       61 mdnnaaaika lelykinakl cdphpskkgt ssaylennsk gahnnsctdr kmnkkemqgp
      121 rddfkdvtfl tedkiyeile lcrekedysp lirvigrvfs saealvqsfr ktkqhtkeel
      181 kslqgkdedk dedekekaac saaameedsg assssssrig entqgdnnlq klgpdevsvd
      241 ieavrrvydr llsnekieta flnalvylsp nvecdltyhn vysrdpnyln lfiivmengn
      301 lhspeylema lplfckamsk lplaaqaklv rlwskyradq irrmmetfqq litykvisne
      361 fnsrnlvndd davvaaskcl kmvyyanvvg gdvdtdhnee edeepipess eltlqellge
      421 errnkkgprv dpletelgvk tidcrkplip feefinepln dvlemdkdyt ffkvetenkf
      481 sfmtcpfiln avtknlglyy dnrirmyser ritvlyslvq gqqlnpylrl kvrrdhiidd
      541 alvrlemiam enpadlkkql yvefegeqgv deggvskeff qlvveeifnp digmftydes
      601 tklfwfnpss fetegqftli givlglaiyn ncildvhfpm vvyrklmgkk gtfrdladsh
      661 pvlyqslrdl leyegsvedd mmitfqisht dlfgnpmmhd lkengdkipi tnenrkefvn
      721 lyadyilnks vekqfkafrr gfhmvtnesp lkylfrpeei ellicgsrnl dfqaleette
      781 ydggytrdsl iirefweivh sftdeqkrlf lqfttgtdra pvgglgklkm iiakngpdte
      841 rlptshtcfn vlllpeyssk eklkerllka ityakgfgml
//
LOCUS       XP_041324329             880 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-protein ligase E3A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324329
VERSION     XP_041324329.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468395.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..880
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..880
                     /product="ubiquitin-protein ligase E3A isoform X1"
                     /calculated_mol_wt=100892
     Region          27..81
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          528..878
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(534,567,578,635,813,842..843,846..850,870,877)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(663,666..667,669..670,673,681,683,687..688,690,696,
                     701,718,722)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..880
                     /gene="UBE3A"
                     /coded_by="XM_041468395.1:448..3090"
                     /db_xref="GeneID:121354055"
ORIGIN      
        1 matackrspg ephseniets rmkraaakhl ieryyhqlte gcgneactne fcascptflr
       61 mdnnaaaika lelykinakl cdphpskkgt ssaylennsk gahnnsctdr kmnkkemqgp
      121 rddfkdvtfl tedkiyeile lcrekedysp lirvigrvfs saealvqsfr ktkqhtkeel
      181 kslqgkdedk dedekekaac saaameedsg assssssrig entqgdnnlq klgpdevsvd
      241 ieavrrvydr llsnekieta flnalvylsp nvecdltyhn vysrdpnyln lfiivmengn
      301 lhspeylema lplfckamsk lplaaqaklv rlwskyradq irrmmetfqq litykvisne
      361 fnsrnlvndd davvaaskcl kmvyyanvvg gdvdtdhnee edeepipess eltlqellge
      421 errnkkgprv dpletelgvk tidcrkplip feefinepln dvlemdkdyt ffkvetenkf
      481 sfmtcpfiln avtknlglyy dnrirmyser ritvlyslvq gqqlnpylrl kvrrdhiidd
      541 alvrlemiam enpadlkkql yvefegeqgv deggvskeff qlvveeifnp digmftydes
      601 tklfwfnpss fetegqftli givlglaiyn ncildvhfpm vvyrklmgkk gtfrdladsh
      661 pvlyqslrdl leyegsvedd mmitfqisht dlfgnpmmhd lkengdkipi tnenrkefvn
      721 lyadyilnks vekqfkafrr gfhmvtnesp lkylfrpeei ellicgsrnl dfqaleette
      781 ydggytrdsl iirefweivh sftdeqkrlf lqfttgtdra pvgglgklkm iiakngpdte
      841 rlptshtcfn vlllpeyssk eklkerllka ityakgfgml
//
LOCUS       XP_041324330             859 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-protein ligase E3A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324330
VERSION     XP_041324330.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468396.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..859
                     /product="ubiquitin-protein ligase E3A isoform X2"
                     /calculated_mol_wt=98609
     Region          6..60
                     /region_name="AZUL"
                     /note="Amino-terminal Zinc-binding domain of ubiquitin
                     ligase E3A; pfam16558"
                     /db_xref="CDD:465173"
     Region          507..857
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(513,546,557,614,792,821..822,825..829,849,856)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(642,645..646,648..649,652,660,662,666..667,669,675,
                     680,697,701)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..859
                     /gene="UBE3A"
                     /coded_by="XM_041468396.1:538..3117"
                     /db_xref="GeneID:121354055"
ORIGIN      
        1 mkraaakhli eryyhqlteg cgneactnef cascptflrm dnnaaaikal elykinaklc
       61 dphpskkgts saylennskg ahnnsctdrk mnkkemqgpr ddfkdvtflt edkiyeilel
      121 crekedyspl irvigrvfss aealvqsfrk tkqhtkeelk slqgkdedkd edekekaacs
      181 aaameedsga ssssssrige ntqgdnnlqk lgpdevsvdi eavrrvydrl lsnekietaf
      241 lnalvylspn vecdltyhnv ysrdpnylnl fiivmengnl hspeylemal plfckamskl
      301 plaaqaklvr lwskyradqi rrmmetfqql itykvisnef nsrnlvnddd avvaaskclk
      361 mvyyanvvgg dvdtdhneee deepipesse ltlqellgee rrnkkgprvd pletelgvkt
      421 idcrkplipf eefineplnd vlemdkdytf fkvetenkfs fmtcpfilna vtknlglyyd
      481 nrirmyserr itvlyslvqg qqlnpylrlk vrrdhiidda lvrlemiame npadlkkqly
      541 vefegeqgvd eggvskeffq lvveeifnpd igmftydest klfwfnpssf etegqftlig
      601 ivlglaiynn cildvhfpmv vyrklmgkkg tfrdladshp vlyqslrdll eyegsveddm
      661 mitfqishtd lfgnpmmhdl kengdkipit nenrkefvnl yadyilnksv ekqfkafrrg
      721 fhmvtnespl kylfrpeeie llicgsrnld fqaleettey dggytrdsli irefweivhs
      781 ftdeqkrlfl qfttgtdrap vgglgklkmi iakngpdter lptshtcfnv lllpeysske
      841 klkerllkai tyakgfgml
//
LOCUS       XP_041324331             233 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 182 [Pyrgilauda ruficollis].
ACCESSION   XP_041324331
VERSION     XP_041324331.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468397.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="transmembrane protein 182"
                     /calculated_mol_wt=25806
     Region          15..223
                     /region_name="Claudin_2"
                     /note="PMP-22/EMP/MP20/Claudin tight junction; pfam13903"
                     /db_xref="CDD:372799"
     CDS             1..233
                     /gene="TMEM182"
                     /coded_by="XM_041468397.1:230..931"
                     /db_xref="GeneID:121354056"
ORIGIN      
        1 mklsvgiffg gffaalgvll flvafgtdyw llateigtcs eapegaggdk atfhhegffw
       61 rcwfsgnvgd nngsmwkfwy tnqspsknct haylspfpll rdehnstsyd saiiyrgfwt
      121 vlmllgvltv vaasfliica apfashilyk agggffiiag vlfslvvvmy viwvqamadl
      181 enytnmkkmd cpdfavyvry gwsfmlapig vffallagml fllvgrdiyl hsd
//
LOCUS       XP_041324332            1385 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324332
VERSION     XP_041324332.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468398.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1385
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X1"
                     /calculated_mol_wt=158348
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Region          1067..1365
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1385
                     /gene="MAP4K4"
                     /coded_by="XM_041468398.1:81..4238"
                     /db_xref="GeneID:121354057"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhahhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eevpeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee merrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 ilqqqllqeq amlleyrwre meehrqaerl qrqlqqeqay llslqhdhsi lqqqqqqqqq
      541 qqqqqernkq syhtpepksh yepaerarev eerfrktnqg speaqskqmg kvleppvpsr
      601 sesfsngnse paqpalqrpm epqvqwshla slknnvspvs rshsfsdpsp kfahhhlrsq
      661 dpyppsrsev lnqssdskse vpdptqkawa rsdsdevppr vpvrttsrsp vlsrrdsplq
      721 gsgqqnnqag qrnstsniep rllwervekl vprpgsgsss gssnsgsqpg shpgsqsgsg
      781 erfrmrsssk segspsqrhe sapkkpeekk evfrpikpag evdltalake lravedvrpp
      841 hkvtdyssss eesgttdeed ddmeqegade stsgpddvra vstlnlsnge tesvktmivh
      901 ddvesepalt pskegtlivr qstvdkkras hhesngfagr ihllpdllqq shssstssts
      961 sspsssqptp tmspqtpqdk lttnetqsas ntlqkhksss sftpfidprl lqispssgtt
     1021 vtsvvgfsse amrseairqd ptrkgsvvnv nptntrpqsd tpeirkykkr fnseilcaal
     1081 wgvnllvgte sglmlldrsg qgkvyplinr rrfqqmdvle glnvlvtisg kknklrvyyl
     1141 swlrnkilhn dpevekkqgw ttvgdlegcv hykvvkyeri kflvialkss vevyawapkp
     1201 yhkfmafksf gelvhkpllv dltveegqrl kviygscagf havdvdsgsv ydiylpthiq
     1261 ssiqphaiii lpntdgmell vcyedegvyv ntygritkdv vlqwgempts vayirsnqim
     1321 gwgekaieir svetghldgv fmhkraqrlk flcerndkvf fasvrsggss qvyfmtlgrt
     1381 sllsw
//
LOCUS       XP_041324333            1384 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324333
VERSION     XP_041324333.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468399.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1384
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X2"
                     /calculated_mol_wt=158249
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Region          1066..1364
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1384
                     /gene="MAP4K4"
                     /coded_by="XM_041468399.1:81..4235"
                     /db_xref="GeneID:121354057"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhahhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eevpeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee merrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 ilqqqllqeq amlleyrwre meehrqaerl qrqlqqeqay llslqhdhsi lqqqqqqqqq
      541 qqqqqernkq syhtpepksh yepaerarev eerfrktnqg speaqskqmg kvleppvpsr
      601 sesfsngnse paqpalqrpm epqvqwshla slknnvspvs rshsfsdpsp kfahhhlrsq
      661 dpyppsrsev lnqssdskse vpdptqkawa rsdsdevppr vpvrttsrsp vlsrrdsplq
      721 gsgqqnnqag qrnstsniep rllwervekl vprpgsgsss gssnsgsqpg shpgsqsgsg
      781 erfrmrsssk segspsqrhe sapkkpeekk evfrpikpag evdltalake lravedvrpp
      841 hkvtdyssss eesgttdeed ddmeqegade stsgpddvra vstlnlsnge tesvktmivh
      901 ddvesepalt pskegtlivr qstvdkkras hhesngfagr ihllpdllqq shssstssts
      961 sspsssqptp tmspqtpqdk lttnetqsas ntlqkhksss sftpfidprl lqispssgtt
     1021 vtsvgfssea mrseairqdp trkgsvvnvn ptntrpqsdt peirkykkrf nseilcaalw
     1081 gvnllvgtes glmlldrsgq gkvyplinrr rfqqmdvleg lnvlvtisgk knklrvyyls
     1141 wlrnkilhnd pevekkqgwt tvgdlegcvh ykvvkyerik flvialkssv evyawapkpy
     1201 hkfmafksfg elvhkpllvd ltveegqrlk viygscagfh avdvdsgsvy diylpthiqs
     1261 siqphaiiil pntdgmellv cyedegvyvn tygritkdvv lqwgemptsv ayirsnqimg
     1321 wgekaieirs vetghldgvf mhkraqrlkf lcerndkvff asvrsggssq vyfmtlgrts
     1381 llsw
//
LOCUS       XP_041324334            1321 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324334
VERSION     XP_041324334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1321
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X3"
                     /calculated_mol_wt=151533
     Region          8..289
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(31..34,37,39,52,54,83,105..108,153,157..158,160,
                     170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Region          1003..1301
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1321
                     /gene="MAP4K4"
                     /coded_by="XM_041468400.1:81..4046"
                     /db_xref="GeneID:121354057"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhahhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eevpeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee merrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 ilqqqllqeq amlleyrwre meehrqaerl qrqlqqeqay llslqhdhsi lqqqqqqqqq
      541 qqqqqernkq syhtpepksh yepaerarev eerfrktnqg speaqskqmg kvleppvpsr
      601 sesfsngnse paqpalqrpm epqvqwshla slknnvspvs rshsfsdpsp kfahhhlrsq
      661 dpyppsrsev lnqssdskse vpdptqkawa rsdsdevppr vpvrttsrsp vlsrrdsplq
      721 gsgqqnnqag qrnstsniep rllwervekl vprpgsgsss gssnsgsqpg shpgsqsgsg
      781 erfrmrsssk segspsqrhe sapkkpeekk evfrpikpag evdltalake lravedvrpp
      841 hkvtdyssss eesgttdeed ddmeqegade stsgpddvra vstlnlsnge tesvktmivh
      901 ddvesepalt pskegtlivr qtqsasntlq khkssssftp fidprllqis pssgttvtsv
      961 vgfsseamrs eairqdptrk gsvvnvnptn trpqsdtpei rkykkrfnse ilcaalwgvn
     1021 llvgtesglm lldrsgqgkv yplinrrrfq qmdvleglnv lvtisgkknk lrvyylswlr
     1081 nkilhndpev ekkqgwttvg dlegcvhykv vkyerikflv ialkssvevy awapkpyhkf
     1141 mafksfgelv hkpllvdltv eegqrlkviy gscagfhavd vdsgsvydiy lpthiqssiq
     1201 phaiiilpnt dgmellvcye degvyvntyg ritkdvvlqw gemptsvayi rsnqimgwge
     1261 kaieirsvet ghldgvfmhk raqrlkflce rndkvffasv rsggssqvyf mtlgrtslls
     1321 w
//
LOCUS       XP_041324335            1308 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324335
VERSION     XP_041324335.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468401.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1308
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X4"
                     /calculated_mol_wt=149722
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          990..1288
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1308
                     /gene="MAP4K4"
                     /coded_by="XM_041468401.1:81..4007"
                     /db_xref="GeneID:121354057"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhahhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eevpeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee merrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 ilqqqllqeq amlleyrwre meehrqaerl qrqlqqeqay llslqhdhsi lqqqqqqqqq
      541 qqqqqernkq syhtpepksh yepaerarev eerfrktnqg speaqskqmg kvleppvpsr
      601 sesfsngnse paqpalqrpm epqvpvrtts rspvlsrrds plqgsgqqnn qagqrnstsn
      661 ieprllwerv eklvprpgsg sssgssnsgs qpgshpgsqs gsgerfrmrs ssksegspsq
      721 rhesapkkpe ekkevfrpik pagevdltal akelravedv rpphkvtdys ssseesgttd
      781 eedddmeqeg adestsgpdd vravstlnls ngetesvktm ivhddvesep altpskegtl
      841 ivrqstvdkk rashhesngf agrihllpdl lqqshsssts stssspsssq ptptmspqtp
      901 qdklttnetq sasntlqkhk ssssftpfid prllqispss gttvtsvvgf sseamrseai
      961 rqdptrkgsv vnvnptntrp qsdtpeirky kkrfnseilc aalwgvnllv gtesglmlld
     1021 rsgqgkvypl inrrrfqqmd vleglnvlvt isgkknklrv yylswlrnki lhndpevekk
     1081 qgwttvgdle gcvhykvvky erikflvial kssvevyawa pkpyhkfmaf ksfgelvhkp
     1141 llvdltveeg qrlkviygsc agfhavdvds gsvydiylpt hiqssiqpha iiilpntdgm
     1201 ellvcyedeg vyvntygrit kdvvlqwgem ptsvayirsn qimgwgekai eirsvetghl
     1261 dgvfmhkraq rlkflcernd kvffasvrsg gssqvyfmtl grtsllsw
//
LOCUS       XP_041324336            1244 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase kinase 4 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324336
VERSION     XP_041324336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1244
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1244
                     /product="mitogen-activated protein kinase kinase kinase
                     kinase 4 isoform X5"
                     /calculated_mol_wt=142906
     Region          8..289
                     /region_name="STKc_MAP4K4_6_N"
                     /note="N-terminal Catalytic domain of the Serine/Threonine
                     Kinases, Mitogen-Activated Protein Kinase Kinase Kinase
                     Kinase 4 and 6; cd06636"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,153,
                     155..158,160,170..171,174,188..191,193,225,234)
                     /site_type="active"
                     /db_xref="CDD:270806"
     Site            order(31..35,39,52,54,83,105..108,111..112,115,157..158,
                     160,171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270806"
     Site            order(34..35,153,155..157,174,188..191,193,225,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270806"
     Site            170..193
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270806"
     Region          926..1224
                     /region_name="CNH"
                     /note="Domain found in NIK1-like kinases, mouse citron and
                     yeast ROM1, ROM2; smart00036"
                     /db_xref="CDD:214481"
     CDS             1..1244
                     /gene="MAP4K4"
                     /coded_by="XM_041468402.1:81..3815"
                     /db_xref="GeneID:121354057"
ORIGIN      
        1 mandspaksl vdidlsslrd pagifelvev vgngtygqvy kgrhvktgql aaikvmdvte
       61 deeeeiklei nmlkkyshhr niatyygafi kksppghddq lwlvmefcga gsitdlvknt
      121 kgntlkedwi ayisreilrg lahlhahhvi hrdikgqnvl ltenaevklv dfgvsaqldr
      181 tvgrrntfig tpywmapevi acdenpdaty dyrsdlwscg itaiemaega pplcdmhpmr
      241 alfliprnpp prlkskkwsk kffsfiegcl vknymqrpst eqllkhpfir dqpnerqvri
      301 qlkdhidrtr kkrgekdete yeysgseeee eevpeqegep ssivnvpges tlrrdflrlq
      361 qenkerseal rrqqllqeqq lreqeeykrq llaerqkrie qqkeqrrrle eqqrrerear
      421 rqqereqrrr eqeekrrlee merrrkeeee rrraeeekrr vereqeyirr qleeeqrhle
      481 ilqqqllqeq amlleyrwre meehrqaerl qrqlqqeqay llslqhdhsi lqqqqqqqqq
      541 qqqqqernkq syhtpepksh yepaerarev eerfrktnqg speaqskqmg kvleppvpsr
      601 sesfsngnse paqpalqrpm epqvpvrtts rspvlsrrds plqgsgqqnn qagqrnstsn
      661 ieprllwerv eklvprpgsg sssgssnsgs qpgshpgsqs gsgerfrmrs ssksegspsq
      721 rhesapkkpe ekkevfrpik pagevdltal akelravedv rpphkvtdys ssseesgttd
      781 eedddmeqeg adestsgpdd vravstlnls ngetesvktm ivhddvesep altpskegtl
      841 ivrqtqsasn tlqkhkssss ftpfidprll qispssgttv tsvvgfssea mrseairqdp
      901 trkgsvvnvn ptntrpqsdt peirkykkrf nseilcaalw gvnllvgtes glmlldrsgq
      961 gkvyplinrr rfqqmdvleg lnvlvtisgk knklrvyyls wlrnkilhnd pevekkqgwt
     1021 tvgdlegcvh ykvvkyerik flvialkssv evyawapkpy hkfmafksfg elvhkpllvd
     1081 ltveegqrlk viygscagfh avdvdsgsvy diylpthiqs siqphaiiil pntdgmellv
     1141 cyedegvyvn tygritkdvv lqwgemptsv ayirsnqimg wgekaieirs vetghldgvf
     1201 mhkraqrlkf lcerndkvff asvrsggssq vyfmtlgrts llsw
//
LOCUS       XP_041324337             699 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SH3RF3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324337
VERSION     XP_041324337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468403.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..699
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..699
                     /product="E3 ubiquitin-protein ligase SH3RF3"
                     /calculated_mol_wt=73606
     Region          15..68
                     /region_name="SH3_SH3RF3_1"
                     /note="First Src Homology 3 domain of SH3 domain
                     containing ring finger 3, an E3 ubiquitin-protein ligase;
                     cd11928"
                     /db_xref="CDD:212861"
     Site            order(21,23,26,30,48..49,62,64..65)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212861"
     Region          78..132
                     /region_name="SH3_SH3RF3_2"
                     /note="Second Src Homology 3 domain of SH3 domain
                     containing ring finger 3, an E3 ubiquitin-protein ligase;
                     cd11931"
                     /db_xref="CDD:212864"
     Site            order(83,85,88,96,114..115,128,130..131)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212864"
     Region          289..345
                     /region_name="SH3_SH3RF3_3"
                     /note="Third Src Homology 3 domain of SH3 domain
                     containing ring finger 3, an E3 ubiquitin-protein ligase;
                     cd11925"
                     /db_xref="CDD:212858"
     Site            order(295,297,300,304,322..323,338,340..341)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212858"
     Region          <342..663
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          644..698
                     /region_name="SH3_SH3RF_C"
                     /note="C-terminal (Fourth) Src Homology 3 domain of SH3
                     domain containing ring finger 1 (SH3RF1), SH3RF3, and
                     similar domains; cd11785"
                     /db_xref="CDD:212719"
     Site            order(649,651,654,658,676..677,692,694..695)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212719"
     CDS             1..699
                     /gene="SH3RF3"
                     /coded_by="XM_041468403.1:1..2100"
                     /db_xref="GeneID:121354059"
ORIGIN      
        1 mgqsaavigs vsqlpygkal ytyegkepgd lkfnkgdiii lrrkvdenwy hgelngnhgf
       61 fpasyiqcik plpqappqgk alydfeikdk dqdkdcltft kdeiltvirr vddnwaegml
      121 gdkigifpil yvelnesakq lmemdktcsa aasgcdmpla tetvavaaaa avglapcstl
      181 agagaagaaq rqvegkknak krhsftalsm thkssqaasn rhsmeisapv lisssdpraa
      241 arigdlthls ssapaqdssl igtatvagpr tsaiigdqgt ppkvqlplni ylalyaykpq
      301 kndelelrkg emyrviekcq dgwfkgtslr sgmsgvfpgn yvtpvsrvpv gagqprnsga
      361 vgaptkvapg aihpivaghs nattavrpvv pitappthpq lqaaspqlsn clryaaqqpg
      421 sqprsamqma hpavpaperp tatvsplrtp sspsrlpaaa irphpavspq hghqppapga
      481 rplipltsaa aaitppnvsa ahlngdvgsg plggpaapgp agkaeerkne kkekksgllk
      541 llagastkkk srsppsvspt hdpqtaiegv lqgavgpels slsshgrags cpiesemqga
      601 mgleplhrkt gsldlnfsip sparpplssm aairpepkpl preryrvvvp yppqseaeie
      661 lkegdivfvh kkredgwykg tlqrngrtgl fpgsfvesf
//
LOCUS       XP_041324338             625 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 138 [Pyrgilauda ruficollis].
ACCESSION   XP_041324338
VERSION     XP_041324338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468404.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..625
                     /product="coiled-coil domain-containing protein 138"
                     /calculated_mol_wt=71361
     Region          <146..>272
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..625
                     /gene="CCDC138"
                     /coded_by="XM_041468404.1:1..1878"
                     /db_xref="GeneID:121354060"
ORIGIN      
        1 mkdclsgalh tkcksrssfv ckeseftetg reksirysdf qkslenwdcf ddekdyfcgs
       61 ngleveensv icsetdairn taiytgtglt lpshlaantp entdqinnlg llkkivhgtg
      121 aqacnrqgli pphiaqiyde lfvihqklqr essaqqeyal qlqkrerclt eqeamffqhe
      181 aalakirgve eevhtkiaai keqheaevkq ltealreitk enrrlkssfd slrdvndslr
      241 kqlsdvteln kklegqarka karlenlqrk hefskvrksn dlcqvvkegk pvkqekvmat
      301 srtamlplns qvyelltylm dwisdqhlsk iktqeereds hkprvtqnlk nsctqekcmk
      361 llpiateqlq wmpyvnpklh mpvikfiyws irqldtdiqh ttirstmrrl gedifkgivs
      421 kgnphssseq stesksksaa ffksfcmplr flstlivlkt vkqvdylaqa feslrvdlkt
      481 degkalfvey qsvpvilshl kvsstsllsr aldgllqmtm esgslqpfle acsnesffrt
      541 csvllrsskl diavleklcv ilqklsriks nkklfelfgl hrmfqelrrt vdpdhtflci
      601 nlnsillnle flrsnsldss lstsq
//
LOCUS       XP_041324339             553 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324339
VERSION     XP_041324339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468405.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..553
                     /product="DNA-binding protein RFX8"
                     /calculated_mol_wt=63699
     Region          15..89
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     CDS             1..553
                     /gene="RFX8"
                     /coded_by="XM_041468405.1:1..1662"
                     /db_xref="GeneID:121354061"
ORIGIN      
        1 mayfgptslt ylpvlqwlad nfylcggctv pcrllyelyi etcnpdfkiq vhpstfgkli
       61 qlvfpglvtr krttagsiry hydgiaikke ssfyarfccl lyeqnylsrs pwssenaady
      121 kknrqkkgts knlqyypsvi ylkteqetfh ylspdfnqff fgeqaqsety pyeliallan
      181 dyynycqvil qmvretkldk vedcimsfwt slqperielm clpdvchllk sydrylfkel
      241 enillpdfle evpaqhidsi rsfsenvkcw mlnplggfpl llqtsksnea kefvkrlrrq
      301 tdlcnmvktv rallnnnstv tvlrsglhai fneksldvtk dlfqekfrnp kkrqkniqlk
      361 clknfisslt sstdirdlls clssdlqtfv ikpskskeaf keqasdfmlk wnlllsnvgk
      421 iltinrtdsf gswlllnmll vdfaahifqs yieeekeegn alvakqnevp vlcvyepnhl
      481 sacfaeeepq anapqtalvm qnqnnfglsd afqsselfge hnhcqqaltv ydgvkklepa
      541 aqkgfrncer vse
//
LOCUS       XP_041324340             328 aa            linear   VRT 06-MAY-2021
DEFINITION  protein CREG2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324340
VERSION     XP_041324340.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468406.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..328
                     /product="protein CREG2"
                     /calculated_mol_wt=35635
     Region          162..322
                     /region_name="Pyrid_oxidase_2"
                     /note="Pyridoxamine 5'-phosphate oxidase; pfam13883"
                     /db_xref="CDD:404723"
     CDS             1..328
                     /gene="CREG2"
                     /coded_by="XM_041468406.1:1..987"
                     /db_xref="GeneID:121354062"
ORIGIN      
        1 mshrlcpdss iflvfrglqq srsarkgrvt prgrpglgrc gavrarrgaa lrggrrprep
       61 cwllpallcg aaggyvvvss vswplpeaga aadelhssst eealpallee agglwkqsyp
      121 asayredaal gsgpgprrpg pgaapsrmfs yrregggapg ragsarflar hstwgfvatr
      181 aargkiqgmp ygnclllsdg pinnstgipf fyvtpkdntv tdllknpmas ltlpeadgnf
      241 crknvidped prcarltltg qmvtvppeev efakqamfsr hpvvrkwprs yewffmkmni
      301 ehiwlqswyg evspiaveey lkavpnkg
//
LOCUS       XP_041324341             813 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal PAS domain-containing protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324341
VERSION     XP_041324341.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468407.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="neuronal PAS domain-containing protein 2"
                     /calculated_mol_wt=90733
     Region          1..77
                     /region_name="bHLH-PAS_NPAS2_PASD4"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in neuronal PAS domain-containing protein 2
                     (NPAS2) and similar proteins; cd19737"
                     /db_xref="CDD:381580"
     Site            order(11,14..15,18..19,21..22,26,44..45)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381580"
     Site            order(24..25,28..29,31..32,35..36,45..46,49..50,53,56..57,
                     59)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381580"
     Region          84..195
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          249..352
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..813
                     /gene="NPAS2"
                     /coded_by="XM_041468407.1:1..2442"
                     /db_xref="GeneID:121354063"
ORIGIN      
        1 mdedekdrak rasrnksekk rrdqfnvlik elssmlpgnt rkmdkttvle kvigflqkhn
       61 evsaqteise iqqdwkpsfl sneeftqlml ealdgfiiav ttggsiiyvs dsitpllghl
      121 pcdvldqnll nflpeqehse iykmlsscml mtdsassdyl ktdnelefyc hllrgslnpk
      181 efptyeyikf vgnfrsysnv pnstcngfde avprayrtsp gkqicfvatv rlatpqflke
      241 mciveeplee ftsrhslewk flfldhrapp iigylpfevl gtsgydyyhi ddlellarch
      301 ehlmqfgkgk sccyrfltkg qqwiwlqthy yityhqwnsk pefivcthmv vsyadvrver
      361 rqemgleevs sevvssalke sgasldpeqh fnaldigasi lsasrtpsvs srsspkssht
      421 pksdpastpt klitesntpl prtpstqqdl svhrlsqpta lqlpcellpq qllpqatlqn
      481 qpaplaqfsa qfsmfqtikd qleqrtrilq anirwqqeel qkiqeqlclv qdssvqmilq
      541 qptvslsfsn tqqldpqqlq qrsgalsqqq lvpssqlqgp itssqtanqq slreasviss
      601 qgpkaarsae lapgggrapp rpspapfasg gggpaappgg lsrggtpapa gcshdqqlrl
      661 llsqpiqpmm pgscnarhps dlsmagsqak ysqtqqmfqs levqtsssss pivlmgqavl
      721 nqgftttpps qpsslppmql qhqqhqqqry lqvqtpsslh neqpdslllp syspqqgnmg
      781 yhqtqqqqqq qqqltsrrrn slsessnlpq plr
//
LOCUS       XP_041324342             139 aa            linear   VRT 06-MAY-2021
DEFINITION  histone H2A-beta, sperm-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324342
VERSION     XP_041324342.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468408.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="histone H2A-beta, sperm-like"
                     /calculated_mol_wt=14888
     Region          1..133
                     /region_name="PTZ00017"
                     /note="histone H2A; Provisional"
                     /db_xref="CDD:185399"
     CDS             1..139
                     /gene="LOC121354064"
                     /coded_by="XM_041468408.1:1..420"
                     /db_xref="GeneID:121354064"
ORIGIN      
        1 msgrgkkhtv agnprralkk sksaraglqf pvgrvhrllq rgkyadrigs gaaiylaavm
       61 eyvtaevlel agnaahenrk trimprhiql avrndeelnk lfacvtipqg gvmpnilsql
      121 lpkktsgsva asqdyggsq
//
LOCUS       XP_041324343             118 aa            linear   VRT 06-MAY-2021
DEFINITION  neuromedin-S [Pyrgilauda ruficollis].
ACCESSION   XP_041324343
VERSION     XP_041324343.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468409.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="neuromedin-S"
                     /calculated_mol_wt=13021
     CDS             1..118
                     /gene="NMS"
                     /coded_by="XM_041468409.1:1..357"
                     /db_xref="GeneID:121354066"
ORIGIN      
        1 mpspppalpw llaacclcal prgsgfpqpf sryrdgvelp pnqqlalcfs qwmemsdqpq
       61 isstvldlcy sifnsmhkne esqtasakft kkdshgtlgr pfflfrprng rtiegsgk
//
LOCUS       XP_041324344            1272 aa            linear   VRT 06-MAY-2021
DEFINITION  AF4/FMR2 family member 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324344
VERSION     XP_041324344.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468410.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1272
                     /product="AF4/FMR2 family member 3"
                     /calculated_mol_wt=137676
     Region          40..542
                     /region_name="AF-4"
                     /note="AF-4 proto-oncoprotein N-terminal region;
                     pfam05110"
                     /db_xref="CDD:461550"
     Region          <576..787
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          1013..1271
                     /region_name="AF-4_C"
                     /note="AF-4 proto-oncoprotein C-terminal region;
                     pfam18876"
                     /db_xref="CDD:465894"
     CDS             1..1272
                     /gene="AFF3"
                     /coded_by="XM_041468410.1:1..3819"
                     /db_xref="GeneID:121354067"
ORIGIN      
        1 msggnstaer rqsrrflecv evtfltqlqe fdllltfcvy epdrnvlrrk ewerrnqeaq
       61 qdngafnasy slfsepyktn kgdelsnriq ntlgnydemk dlltdrsnqs hlvgvpkpgv
      121 pqtslpktde hlladsrppp pppissttss tpaslaaqqs ksttmgwqka ghnatsdgqq
      181 raskhghrsl eshkgdfkla sqksnleklk hyassptsss sssscsssss asssssssss
      241 ssnsaqqssl ratlgentnr vqqpakiscs seggtkvqer pakhggghcv qnfppslask
      301 pslgqqkpta yvrpmdgqdq apdespklkl paestksyrg vpsskpdsar tkskitkfsi
      361 pkqeedsgtg dnscieeilr emthswpppl saihtpgkae qskfpfpnke sqqgstghsn
      421 trksdvepkt peksathtsm leddlklssd eeendqqaaq rsalrvlsds slvvpqsnar
      481 asglsskgss sssssesets sesdsesess ssesdgskps hysspepepp ssnkwqldkw
      541 lnkvtphkap ilthpdgpal eahpyygrvk aerqegqktp aegpaehrse esrtaaaaaa
      601 agdgprprta nkapgskgsr qksplaadgg pprrasgkka prraerssag dgppcpsaee
      661 pprshgfpes aageaprarp ggcraghrre prsaaagekr rargpsktap kskefietes
      721 sssssssdsg sesereerpl pkapaaagpe prgardagtg taskphggcs afgsinarts
      781 seiakeleeq fytlvpfgrn ellsplkdsd evkslwvnid lallsriper lpeeplamsa
      841 ganqaasfpq gssaeppaek glpksrrkrk ceneeecrdi kkthleress srlaasaqsi
      901 ttanhcnine nslaipinkn ekmlrspvsp lsdaskhkys nddltsssrp ngssllpsis
      961 sskkhkgeiq sqphpgdfnk aihinsenvl lcnkpqfqte pwsplsttpr dcrrtklifd
     1021 diprnadyfm qeakrkkhka damvekfgka lnyaeaalsf iecgnameqg pmeskspytm
     1081 ysetveliry avrlkthsgp natpedkqla alcyrclall ywrmfrlkrd havkyskali
     1141 eyfknsskaa qnpspwgasg kstgtpspms pspspvssvg sqgstgapsp spiisipqri
     1201 hqmaanhvsi tnsilhsydy wemadnlake nrdffndlda lmgpitlhss mehlvqytqq
     1261 glhwvrnsah ls
//
LOCUS       XP_041324345             201 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: lysozyme g-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324345
VERSION     XP_041324345.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468411.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 16% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="LOW QUALITY PROTEIN: lysozyme g-like"
                     /calculated_mol_wt=22082
     Region          36..200
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..201
                     /gene="LOC121354068"
                     /coded_by="XM_041468411.1:1..606"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121354068"
ORIGIN      
        1 mvrgmftfsl snnhfggvkh vffgcsghcg nilnvdttga lgaavkpdsl sckslpqrrq
       61 qknmekyqak makagngagl apavidcwyy lsragtelke glgdhenafg lmqagkqyrk
      121 idepwdteen lgxkteilyi minxrkksps wtkerhlrgg isaynagvnt vqtydkmdtg
      181 kthnytnnvd vrarfykkng y
//
LOCUS       XP_041324347             507 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: testis-specific gene 10 protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324347
VERSION     XP_041324347.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468413.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 6% of CDS bases
            frameshifts          :: corrected 6 indels
            internal stop codons :: corrected 7 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="LOW QUALITY PROTEIN: testis-specific gene 10
                     protein"
                     /calculated_mol_wt=56775
     Region          <180..474
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..507
                     /gene="TSGA10"
                     /coded_by="XM_041468413.1:1..1524"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 8 bases in 5 codons;
                     deleted 2 bases in 1 codon; substituted 7 bases at 7
                     genomic stop codons"
                     /db_xref="GeneID:121354069"
ORIGIN      
        1 miltasgsps rldtfixsle kdrdchkcet enllkvlrnt fsspqxistc gsikkkssih
       61 gvvadpeilq ilkeceeles twkinechxa eiqgnfkvlt aerekilsly eqaqeeisql
      121 cqeaikcprt pksitpvtaq avlrhmeier ntalsdcqrm ptergglreq lqipqeaafn
      181 ekahleqrie elxmtihnld seqleqmskv almkdtidsl dtemkrlxqv ldsetelxqe
      241 aeyaslsllt ektklslsei qxrlvkxkle mqlnqekimh ldekaekvly kklakyqsqt
      301 elddmklkaq dsnrdilrlk nvlkskvrer tvssyhkace qgesweakch eaexrlflld
      361 wqxsvqsesh swkgkteslk tqmeqlqnkc asnhsetell rkqlgnekas mknlesslvs
      421 ncekefqsqr anqekvtetq fhmeqlalve nnlavxnqdf thlrnraaxe selditktql
      481 gtehfdskde gseedisgki iffmgrn
//
LOCUS       XP_041324348            1303 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: von Willebrand factor A domain-containing
            protein 3B [Pyrgilauda ruficollis].
ACCESSION   XP_041324348
VERSION     XP_041324348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468414.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1303
                     /product="LOW QUALITY PROTEIN: von Willebrand factor A
                     domain-containing protein 3B"
                     /calculated_mol_wt=147981
     Region          526..677
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cd00198"
                     /db_xref="CDD:238119"
     Site            order(532,602,625)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          1070..1195
                     /region_name="DUF4537"
                     /note="Domain of unknown function (DUF4537); pfam15057"
                     /db_xref="CDD:464475"
     CDS             1..1303
                     /gene="VWA3B"
                     /coded_by="XM_041468414.1:23..3934"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons"
                     /db_xref="GeneID:121354070"
ORIGIN      
        1 mtavpskrla wsdyafdlkh rqdpedshev hkkksnekkr rlavgqwrtd vqslvssskw
       61 lqryglkrnk lslsqilsqi gfqhrkdfvt algkpvasry adglfpqykr aqdgsvynlt
      121 akkelilhfv dcligaiely kqrmewltse srqifgviqe qcivivldfg taaptefdlc
      181 rdalsmvlve qviqisrfnl iraaqdlmkw qqkctpvser tvksavtwlw klehmtavsh
      241 tssaeallea mgdeaveavy yfavgdvpvd tkqlllekvs dgscpvntvs fnaredetil
      301 flkelshlas grfhafagkn ncrdatgpal kyeedgkgli alnsgkvkgr mplvagvced
      361 vfliwkelee arstvrqvqe mlsesdqsas qdgdhplskh itdkyltsek wlqkyglkaq
      421 kltlydalad svfhhvdgpv diktkpedec sqtdvetkrk iiharycdkf vhtlwkdgsv
      481 vhvyvtteky kqykekmrta lrqvegrikw lqegsrglfg nifednvyil idtsqsmnnk
      541 lplvkekilq lmkeqlrhkk rfnfvkfsaq avawqeklae vneenlqdaw lwikgleags
      601 stntlkalqi aladtdtqai ylltdgrpdq ppqiilaevq lhckipihtv sfncddiean
      661 kflyelstkt egrfhyynic lsdpdttefi vnkdihllkr eidqgekdle kvktfheksl
      721 mmnsyseeny pekncnhkqt hsvsxvskhi eelstslrsr pccaseepsv psheqtrqst
      781 aaspaqrkka lyadqtktsl lqilnrgvkf reespqegvs peeksfsvek svkcttifkg
      841 kltqqetptg edgknvkgas essldvssal wlkshglaar rltimdalap tsvlhstkyi
      901 pvldkhvvsk vfdkmlplah vssdkkgial inpwamnlda ykkkleqaik syerrlslvi
      961 wralsqeerd kfkengpvqy iqhketllea lenlgwpvsy edvklledei ltaltylqqv
     1021 sdlqeavkke ieksseshis nnkkrleees gklnsktrqk cqifvphksq kviarsdvtg
     1081 fyypgtvikn isstcalidf sngkscdvpv kfiipvggam pcphlqvgdy vfartgtrae
     1141 necyvpaivi atpqrvetgd kfytvllfnn kdehcirsel ikisqtkyas scqyirmvqt
     1201 vdyeildget tkpcprqpve degeekakqs ivkekrrkkk kkrttvdkrh lrettsdldn
     1261 lxvfrnevkq hgrnslssnk eefidclqip ytllivdimv pii
//
LOCUS       XP_041324349             315 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354071 [Pyrgilauda ruficollis].
ACCESSION   XP_041324349
VERSION     XP_041324349.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468415.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="uncharacterized protein LOC121354071"
                     /calculated_mol_wt=33199
     CDS             1..315
                     /gene="LOC121354071"
                     /coded_by="XM_041468415.1:17..964"
                     /db_xref="GeneID:121354071"
ORIGIN      
        1 mrgprrtrdr aagekeappl llrpvspepr pggagkarra ggrpgragra rllllllcrp
       61 graqreprts ilgqrgcrrg agsgraggra grregekegg pavsrraara garrgeaaar
      121 yppratiesc raapsgrvhs rrrpaeersg gsadacapgr arrgppcxlr vrsrrvrgvg
      181 rcegtgacvt gaavttridt rthtcvrthv yvytsickyk hidagahavt htqvpreagg
      241 qsrdwwhskr pslpwarrva aasseslgrs ppsstgvqpv rqaawqpaqg lsrliwagsr
      301 grlaegsngr gaagg
//
LOCUS       XP_041324350            1160 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 8 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324350
VERSION     XP_041324350.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468416.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1160
                     /product="TBC1 domain family member 8 isoform X1"
                     /calculated_mol_wt=132500
     Region          171..269
                     /region_name="PH-GRAM1_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 1; cd13349"
                     /db_xref="CDD:270156"
     Region          311..405
                     /region_name="PH-GRAM2_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 2; cd13353"
                     /db_xref="CDD:270160"
     Region          522..721
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..1160
                     /gene="TBC1D8"
                     /coded_by="XM_041468416.1:105..3587"
                     /db_xref="GeneID:121354072"
ORIGIN      
        1 mwlkpeevll knalklwvtq kssgyfilqr rrghgdgggr ftgrlvgald avldsnarva
       61 pfrillqvpg sqvysaiacg ellngsevyw aiaigataee inqhwewleq nllhtlsvfd
      121 nkedivsfvk gkvkaliaee tssklaeqee dpekfrealv kfesrfnfpe aeklityysc
      181 ccwkgkvprq gwlylsinhl cfysfflgke lkliipwvev qklertsnvf mtdtvrvtta
      241 nkerdfstfl niseafrime qladvtlrrl ldneifeldp glqdptqitk rdlearaqne
      301 ffraffrlpr keklhevvdc slwtpfsrch tagtmytsds yicfaskeng cctviiplre
      361 visiekmedt sllpnpiivs vrsktafqfi elkdrdtlve nllqrfkevn ssnplhcnnl
      421 qnnnqnslaf gsmsmlgdde paclgteasq gkerseceke nnyllnaeal rsdfhqsgmp
      481 gldfgksreq ikeslwddhf veygrtvcmf rtekirklva mgipeslrgk lwllfsdaqt
      541 dlashpgyyv hlveasmgkc cmateeierd lhrslpehpa fqsetgiaal rrvltayahr
      601 npkigycqsm niltsvllly akeeeafwll vavcermlpd yfnhrvigaq vdqsvfeeli
      661 keqlpelaeh mkdltalasi slswfltlfl simplesavn vvdcffydgi kaifqlglai
      721 leanavdlcn skddgqalmi lsrflehvkn eesplppign hhaffsddqe sspvteianl
      781 ihdsyekfgd hsveqiehmr ykhrirvlqs hedttkqnvl rvvipdvsil pedleelydl
      841 fkrehlircy wesrsavser hdpsrpyaeq yridaqqfas lyrllspwtc gehtdllahr
      901 tfrlldenmd rlvefkglas cldvmyngem nekikllykl hippaltene rdsqsplknp
      961 llstsrplvi gksngdavdy qkqlkqmlkd lakekdtkte kelpkmsqke fiqfcktlys
     1021 mfhedpeend lyqaiatvtt lllqigevgq rsislgsgsd eftedlqpea sasdqdavft
     1081 dtvktphkds qpspvtegdw svsfehilas llteqslvnf fekplelkpk lenaklnqys
     1141 lrtngmscqs rselakpsmq
//
LOCUS       XP_041324351            1159 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 8 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324351
VERSION     XP_041324351.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468417.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1159
                     /product="TBC1 domain family member 8 isoform X2"
                     /calculated_mol_wt=132371
     Region          171..269
                     /region_name="PH-GRAM1_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 1; cd13349"
                     /db_xref="CDD:270156"
     Region          311..405
                     /region_name="PH-GRAM2_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 2; cd13353"
                     /db_xref="CDD:270160"
     Region          522..721
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..1159
                     /gene="TBC1D8"
                     /coded_by="XM_041468417.1:105..3584"
                     /db_xref="GeneID:121354072"
ORIGIN      
        1 mwlkpeevll knalklwvtq kssgyfilqr rrghgdgggr ftgrlvgald avldsnarva
       61 pfrillqvpg sqvysaiacg ellngsevyw aiaigataee inqhwewleq nllhtlsvfd
      121 nkedivsfvk gkvkaliaee tssklaeqee dpekfrealv kfesrfnfpe aeklityysc
      181 ccwkgkvprq gwlylsinhl cfysfflgke lkliipwvev qklertsnvf mtdtvrvtta
      241 nkerdfstfl niseafrime qladvtlrrl ldneifeldp glqdptqitk rdlearaqne
      301 ffraffrlpr keklhevvdc slwtpfsrch tagtmytsds yicfaskeng cctviiplre
      361 visiekmedt sllpnpiivs vrsktafqfi elkdrdtlve nllqrfkevn ssnplhcnnl
      421 qnnnqnslaf gsmsmlgdde paclgteasq gkerseceke nnyllnaeal rsdfhqsgmp
      481 gldfgksreq ikeslwddhf veygrtvcmf rtekirklva mgipeslrgk lwllfsdaqt
      541 dlashpgyyv hlveasmgkc cmateeierd lhrslpehpa fqsetgiaal rrvltayahr
      601 npkigycqsm niltsvllly akeeeafwll vavcermlpd yfnhrvigaq vdqsvfeeli
      661 keqlpelaeh mkdltalasi slswfltlfl simplesavn vvdcffydgi kaifqlglai
      721 leanavdlcn skddgqalmi lsrflehvkn eesplppign hhaffsddqe sspvteianl
      781 ihdsyekfgd hsveqiehmr ykhrirvlqs hedttkqnvl rvvipdvsil pedleelydl
      841 fkrehlircy wesrsavser hdpsrpyaeq yridaqqfas lyrllspwtc gehtdllahr
      901 tfrlldenmd rlvefkglas cldvmyngem nekikllykl hippaltene rdsqsplknp
      961 llstsrplvi gksngdavdy qkqlkqmlkd lakekdtkte kelpkmsqef iqfcktlysm
     1021 fhedpeendl yqaiatvttl llqigevgqr sislgsgsde ftedlqpeas asdqdavftd
     1081 tvktphkdsq pspvtegdws vsfehilasl lteqslvnff ekplelkpkl enaklnqysl
     1141 rtngmscqsr selakpsmq
//
LOCUS       XP_041324352            1145 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 8 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324352
VERSION     XP_041324352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468418.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1145
                     /product="TBC1 domain family member 8 isoform X3"
                     /calculated_mol_wt=130883
     Region          156..254
                     /region_name="PH-GRAM1_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 1; cd13349"
                     /db_xref="CDD:270156"
     Region          296..390
                     /region_name="PH-GRAM2_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 2; cd13353"
                     /db_xref="CDD:270160"
     Region          507..706
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..1145
                     /gene="TBC1D8"
                     /coded_by="XM_041468418.1:105..3542"
                     /db_xref="GeneID:121354072"
ORIGIN      
        1 mwlkpeevll knalklwvtq kssgyfilqr rrghgdgggr ftgrlvgald avldsnarva
       61 pfrillqvpg sqvysaiacg ataeeinqhw ewleqnllht lsvfdnkedi vsfvkgkvka
      121 liaeetsskl aeqeedpekf realvkfesr fnfpeaekli tyyscccwkg kvprqgwlyl
      181 sinhlcfysf flgkelklii pwvevqkler tsnvfmtdtv rvttankerd fstflnisea
      241 frimeqladv tlrrlldnei feldpglqdp tqitkrdlea raqneffraf frlprkeklh
      301 evvdcslwtp fsrchtagtm ytsdsyicfa skengcctvi iplrevisie kmedtsllpn
      361 piivsvrskt afqfielkdr dtlvenllqr fkevnssnpl hcnnlqnnnq nslafgsmsm
      421 lgddepaclg teasqgkers ecekennyll naealrsdfh qsgmpgldfg ksreqikesl
      481 wddhfveygr tvcmfrteki rklvamgipe slrgklwllf sdaqtdlash pgyyvhlvea
      541 smgkccmate eierdlhrsl pehpafqset giaalrrvlt ayahrnpkig ycqsmnilts
      601 vlllyakeee afwllvavce rmlpdyfnhr vigaqvdqsv feelikeqlp elaehmkdlt
      661 alasislswf ltlflsimpl esavnvvdcf fydgikaifq lglaileana vdlcnskddg
      721 qalmilsrfl ehvkneespl ppignhhaff sddqesspvt eianlihdsy ekfgdhsveq
      781 iehmrykhri rvlqshedtt kqnvlrvvip dvsilpedle elydlfkreh lircywesrs
      841 avserhdpsr pyaeqyrida qqfaslyrll spwtcgehtd llahrtfrll denmdrlvef
      901 kglascldvm yngemnekik llyklhippa ltenerdsqs plknpllsts rplvigksng
      961 davdyqkqlk qmlkdlakek dtktekelpk msqkefiqfc ktlysmfhed peendlyqai
     1021 atvttlllqi gevgqrsisl gsgsdefted lqpeasasdq davftdtvkt phkdsqpspv
     1081 tegdwsvsfe hilasllteq slvnffekpl elkpklenak lnqyslrtng mscqsrsela
     1141 kpsmq
//
LOCUS       XP_041324353            1144 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 8 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324353
VERSION     XP_041324353.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468419.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1144
                     /product="TBC1 domain family member 8 isoform X4"
                     /calculated_mol_wt=130500
     Region          171..269
                     /region_name="PH-GRAM1_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 1; cd13349"
                     /db_xref="CDD:270156"
     Region          295..389
                     /region_name="PH-GRAM2_TBC1D8"
                     /note="TBC1 domain family member 8 (TBC1D8; also called
                     Vascular Rab-GAP/TBC-containing protein) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain, repeat 2; cd13353"
                     /db_xref="CDD:270160"
     Region          506..705
                     /region_name="TBC"
                     /note="Domain in Tre-2, BUB2p, and Cdc16p. Probable
                     Rab-GAPs; smart00164"
                     /db_xref="CDD:214540"
     CDS             1..1144
                     /gene="TBC1D8"
                     /coded_by="XM_041468419.1:105..3539"
                     /db_xref="GeneID:121354072"
ORIGIN      
        1 mwlkpeevll knalklwvtq kssgyfilqr rrghgdgggr ftgrlvgald avldsnarva
       61 pfrillqvpg sqvysaiacg ellngsevyw aiaigataee inqhwewleq nllhtlsvfd
      121 nkedivsfvk gkvkaliaee tssklaeqee dpekfrealv kfesrfnfpe aeklityysc
      181 ccwkgkvprq gwlylsinhl cfysfflgke lkliipwvev qklertsnvf mtdtvrvtta
      241 nkerdfstfl niseafrime qladvtlrrl ldneifeldp glqdptqitk rlprkeklhe
      301 vvdcslwtpf srchtagtmy tsdsyicfas kengcctvii plrevisiek medtsllpnp
      361 iivsvrskta fqfielkdrd tlvenllqrf kevnssnplh cnnlqnnnqn slafgsmsml
      421 gddepaclgt easqgkerse cekennylln aealrsdfhq sgmpgldfgk sreqikeslw
      481 ddhfveygrt vcmfrtekir klvamgipes lrgklwllfs daqtdlashp gyyvhlveas
      541 mgkccmatee ierdlhrslp ehpafqsetg iaalrrvlta yahrnpkigy cqsmniltsv
      601 lllyakeeea fwllvavcer mlpdyfnhrv igaqvdqsvf eelikeqlpe laehmkdlta
      661 lasislswfl tlflsimple savnvvdcff ydgikaifql glaileanav dlcnskddgq
      721 almilsrfle hvkneesplp pignhhaffs ddqesspvte ianlihdsye kfgdhsveqi
      781 ehmrykhrir vlqshedttk qnvlrvvipd vsilpedlee lydlfkrehl ircywesrsa
      841 vserhdpsrp yaeqyridaq qfaslyrlls pwtcgehtdl lahrtfrlld enmdrlvefk
      901 glascldvmy ngemnekikl lyklhippal tenerdsqsp lknpllstsr plvigksngd
      961 avdyqkqlkq mlkdlakekd tktekelpkm sqkefiqfck tlysmfhedp eendlyqaia
     1021 tvttlllqig evgqrsislg sgsdeftedl qpeasasdqd avftdtvktp hkdsqpspvt
     1081 egdwsvsfeh ilasllteqs lvnffekple lkpklenakl nqyslrtngm scqsrselak
     1141 psmq
//
LOCUS       XP_041324354             125 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L31 [Pyrgilauda ruficollis].
ACCESSION   XP_041324354
VERSION     XP_041324354.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468420.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..125
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..125
                     /product="60S ribosomal protein L31"
                     /calculated_mol_wt=14275
     Region          19..100
                     /region_name="Ribosomal_L31e"
                     /note="Ribosomal protein L31e; pfam01198"
                     /db_xref="CDD:460108"
     CDS             1..125
                     /gene="RPL31"
                     /coded_by="XM_041468420.1:108..485"
                     /db_xref="GeneID:121354073"
ORIGIN      
        1 mapakkggek kkgrsainev vtreytinih krihgvgfkk rapralkeir kfamkemgtp
       61 dvridtrlnk avwakgirnv pyrirvrlsr krnededspn klytlvtyvp vttfkglqtv
      121 nvden
//
LOCUS       XP_041324355             528 aa            linear   VRT 06-MAY-2021
DEFINITION  putative GTP-binding protein 6, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324355
VERSION     XP_041324355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468421.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..528
                     /product="putative GTP-binding protein 6"
     Region          123..522
                     /region_name="HflX"
                     /note="50S ribosomal subunit-associated GTPase HflX
                     [Translation, ribosomal structure and biogenesis];
                     COG2262"
                     /db_xref="CDD:441863"
     CDS             1..528
                     /gene="GTPBP6"
                     /coded_by="XM_041468421.1:<1..1587"
                     /db_xref="GeneID:121354075"
ORIGIN      
        1 plpvrplsaa aplraslrpp gtgggapwng aagaggdeee eeeeeeedea aleellgpsp
       61 lapgpgaqrv avvhpavkwg pqksplttga glrgagrwel yiqgvrnglp wdvveslfld
      121 vselqiaeav alvdtlqnwt vldkiiiptk npnkkfvfgk gnfqvlteki kklphvtavf
      181 lnverisslt kkelegawgv qvfdrytvvl hifrcnartk eaklqialae ipllrsnlkn
      241 evsqrdqqrg gsryimgsge tfletqsrvl kerelkirna leklrrkral lrtqrrkcef
      301 pivsvmgytn cgkttlikal tgeaglqprd qlfatldita hagylpshmp viyvdtigfl
      361 tdlphnlves fsatleevay sdlivhvrdi thpetilqka tvlsvlrnln lpshlldsmv
      421 evhnkvdlie rykpteesal avsalrghgl eelkqeiekk iltatgkkil tvninlegpq
      481 lswlykeatv qevevmpeds tarvkviiss safgryknlf pnseifms
//
LOCUS       XP_041324356            1185 aa            linear   VRT 06-MAY-2021
DEFINITION  cohesin subunit SA-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324356
VERSION     XP_041324356.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468422.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1185
                     /product="cohesin subunit SA-2-like"
                     /calculated_mol_wt=135696
     Region          96..>418
                     /region_name="IRR1"
                     /note="Cohesin [Cell division and chromosome
                     partitioning]; COG5537"
                     /db_xref="CDD:227824"
     Region          178..290
                     /region_name="STAG"
                     /note="STAG domain; pfam08514"
                     /db_xref="CDD:462502"
     CDS             1..1185
                     /gene="LOC121354076"
                     /coded_by="XM_041468422.1:225..3782"
                     /db_xref="GeneID:121354076"
ORIGIN      
        1 miaepnaasn lpsqkenavh detvpespaq ngtcvrngnl ktprekrkvr eqcenirrns
       61 pasrrvsqlq ngevveavtl fevvsmgkqa mqsvvvgwve aykqdrnval ldlinffiqc
      121 sgcqgmvtae mfqslykkdi mqkmtetfdk etglqykkfm aypwiltvtw pvdmdnedyp
      181 lirtgpywkk fkanfcefia vlvqqcqcsi lydnylmdai islltglads mvrafrhtst
      241 laamklltav vsvhlnldvn khnaqklyev ekkrlsgkrt syrldqlerk rkeyehklle
      301 iqnmmnaifk gtflnryrdv ipeiratcie eigswiktyp daflndsylk yvgwmlydkq
      361 aevrlkcllg lqgiysrkel asrmdlftnr fkdrivsmpl dkdhevavqa mkllmlmsqn
      421 cedvlsaedc emlyqfvytt hrplavaage flykrllshk rdkevqpkgg gkfgastdql
      481 krlidffles elhkhvaylv dslwdwagkf lkdwecmttl llknaeeage alsdaqesal
      541 ieiilatvre aaeghppvgr gaakkilsvk ekkiqledct kitehfimvl pqllakystd
      601 aqkvasllqi pqyynldvys tghlekhlda llreikdiva khsdmsvlea ssrtyyvlcr
      661 eeiaiysqvd cartqmidel mkqlnqlldc fwqkeggfct dageisrmhs tlrrvaafhn
      721 llrllwfske ksnaelriln yntiilpalq ctyfsllwql aavsenspke tlfplrrqlr
      781 hfsqictcfl hhkekdvrek afmilcdwll ilshldsnne eavgllgylp ntqlqeklfs
      841 fiqehvfkdg eeekkdltee gkddtckldd lhkkrsllaa ycklivynvv emtaaaeiyk
      901 yyvktysdfg diiketlskm rynnkiqsak tlilclqqlf qthaesqdss ngvdfsspsf
      961 anikelarrf sltfgwdqvk sresiamihk egiefafqga tgvdgkclpp nlsflliise
     1021 fsnkllkpdk rlvysylrry iteplpcrgd kwqplvwyrn sllanedees svlgslgewp
     1081 pvgssktssf krklsngslp etsqteagsk apeqqcvsqf ssaagksrkr lksqemhlqe
     1141 hlpflcpggl rrkyckdevk redvseggpe dtiedvdvvg teqds
//
LOCUS       XP_041324357             226 aa            linear   VRT 06-MAY-2021
DEFINITION  acetylserotonin O-methyltransferase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324357
VERSION     XP_041324357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468423.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..226
                     /product="acetylserotonin O-methyltransferase-like"
                     /calculated_mol_wt=24992
     Region          2..206
                     /region_name="Methyltransf_2"
                     /note="O-methyltransferase domain; pfam00891"
                     /db_xref="CDD:395719"
     CDS             1..226
                     /gene="LOC121354077"
                     /coded_by="XM_041468423.1:1..681"
                     /db_xref="GeneID:121354077"
ORIGIN      
        1 mdatqegrnq yerafgvssk dpfgamyrsd eemlkfmagq nsvwsicgrd vlaafdlspf
       61 tqiydlgggg galaqecvsl ypnstvtiyd lpkvvqvake qfvspeerqi tfhegdffnd
      121 sipeaelyil skilhdwddd kckqllakvy kackpgggvl lvesllnedk sgpvetqlys
      181 mnmlvqtegk ertaaeyskl leaagfgviq vkrtgklyda mlgrkq
//
LOCUS       XP_041324359             276 aa            linear   VRT 06-MAY-2021
DEFINITION  arginine and glutamate-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324359
VERSION     XP_041324359.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468425.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="arginine and glutamate-rich protein 1"
                     /calculated_mol_wt=33371
     Region          133..272
                     /region_name="ARGLU"
                     /note="Arginine and glutamate-rich 1; pfam15346"
                     /db_xref="CDD:405931"
     CDS             1..276
                     /gene="ARGLU1"
                     /coded_by="XM_041468425.1:255..1085"
                     /db_xref="GeneID:121354078"
ORIGIN      
        1 mgrsrsrsss rskhtksskh nkknrsrsrs rsrekerark rsksreskrn rrresrsrsr
       61 sntapssrrd rdrdrdrass ppdridifgr tvskrsslde kqkreeeekk aeferqrkir
      121 qqeieeklie eetarrveel vakrveeele krkdeierev lrrveeakri mekqlleele
      181 rqrqaelaaq kareeeerak reelerilee nnrkiaeaqa klaeeqlkiv eeqrkiheer
      241 mkleqerqrq qkeeqkiilg kgksrpklsf slksqd
//
LOCUS       XP_041324360             912 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA ligase 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324360
VERSION     XP_041324360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="DNA ligase 4 isoform X1"
                     /calculated_mol_wt=103800
     Region          86..607
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          663..750
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          755..788
                     /region_name="DNA_ligase_IV"
                     /note="DNA ligase IV; pfam11411"
                     /db_xref="CDD:463272"
     Region          814..901
                     /region_name="BRCT_DNA_ligase_IV_rpt2"
                     /note="second BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17717"
                     /db_xref="CDD:349349"
     Site            order(815,836..838,840..841,844..845,847..848,896,
                     899..900)
                     /site_type="other"
                     /note="XRCC4 interaction site [polypeptide binding]"
                     /db_xref="CDD:349349"
     CDS             1..912
                     /gene="LIG4"
                     /coded_by="XM_041468426.1:129..2867"
                     /db_xref="GeneID:121354079"
ORIGIN      
        1 masapvsqpp pkktvashvp fadlcstler iqksksrpek tkyfkdflds wrkfhnalhq
       61 kekdvtdsfy pamrlilpql erermaygik etmlaklyie llslpkdgkd aakllnyrtp
      121 tgsrgdagdf amiayfvlkp rspkqgrlti eqvnehldai annnaaknkg qlkksllqli
      181 tqstaleqkw lirmiikdlk lgvsqqtifs ifhpdaaelh nvttdlekvc rqlhdpsvsl
      241 sdvsimlfsa fkpmlaaiad vqqiekqmsn qtfyietkld germqmhkdg dvykyfsrng
      301 fdytqqfgas plegsltpfi hnvfksniqn cildgemmay npeaqtfmqk gnkfdikrmv
      361 edsdlqtcfc vfdvlmvndq klghevlskr yeilssvftp vkgrihvvhk rnartrkevi
      421 dalneaidnr eegimvkdpm stykpdkrge gwlkikpeyv sglmdeldll ivggywgkgs
      481 rggmmshflc avaetpppne kptifhsicr vgsgytmkel ydlglklakh wkpyhrkdpp
      541 gnilcgaekp emyiepcnsv ivqikaaeiv dsdmyktdct lrfpriekir edkewyecmt
      601 sdmledlrnk aqgklaskhl hvdeydephe kkrktvskvr kvigiaeqfk apdlssvskv
      661 snvfedvefc vmtgigkysk selesriaqc ggsvvqnpgp etycvivgae nvrvkniias
      721 nkydvvraew llqcfqtkml vpwqpafmih mspdtkehfa reydcygdsy tantdvvqlk
      781 evfsrmkdnk ampldliael eerywcnscq lgifrgstiy vdcyavvnep qskipgttls
      841 ikalelrfyg aevvshleeg vshvvvgedc srveemkalr rtfgkkfkiv selwvthsve
      901 egvtknenqy lv
//
LOCUS       XP_041324361             912 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA ligase 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324361
VERSION     XP_041324361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468427.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="DNA ligase 4 isoform X1"
                     /calculated_mol_wt=103800
     Region          86..607
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          663..750
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          755..788
                     /region_name="DNA_ligase_IV"
                     /note="DNA ligase IV; pfam11411"
                     /db_xref="CDD:463272"
     Region          814..901
                     /region_name="BRCT_DNA_ligase_IV_rpt2"
                     /note="second BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17717"
                     /db_xref="CDD:349349"
     Site            order(815,836..838,840..841,844..845,847..848,896,
                     899..900)
                     /site_type="other"
                     /note="XRCC4 interaction site [polypeptide binding]"
                     /db_xref="CDD:349349"
     CDS             1..912
                     /gene="LIG4"
                     /coded_by="XM_041468427.1:133..2871"
                     /db_xref="GeneID:121354079"
ORIGIN      
        1 masapvsqpp pkktvashvp fadlcstler iqksksrpek tkyfkdflds wrkfhnalhq
       61 kekdvtdsfy pamrlilpql erermaygik etmlaklyie llslpkdgkd aakllnyrtp
      121 tgsrgdagdf amiayfvlkp rspkqgrlti eqvnehldai annnaaknkg qlkksllqli
      181 tqstaleqkw lirmiikdlk lgvsqqtifs ifhpdaaelh nvttdlekvc rqlhdpsvsl
      241 sdvsimlfsa fkpmlaaiad vqqiekqmsn qtfyietkld germqmhkdg dvykyfsrng
      301 fdytqqfgas plegsltpfi hnvfksniqn cildgemmay npeaqtfmqk gnkfdikrmv
      361 edsdlqtcfc vfdvlmvndq klghevlskr yeilssvftp vkgrihvvhk rnartrkevi
      421 dalneaidnr eegimvkdpm stykpdkrge gwlkikpeyv sglmdeldll ivggywgkgs
      481 rggmmshflc avaetpppne kptifhsicr vgsgytmkel ydlglklakh wkpyhrkdpp
      541 gnilcgaekp emyiepcnsv ivqikaaeiv dsdmyktdct lrfpriekir edkewyecmt
      601 sdmledlrnk aqgklaskhl hvdeydephe kkrktvskvr kvigiaeqfk apdlssvskv
      661 snvfedvefc vmtgigkysk selesriaqc ggsvvqnpgp etycvivgae nvrvkniias
      721 nkydvvraew llqcfqtkml vpwqpafmih mspdtkehfa reydcygdsy tantdvvqlk
      781 evfsrmkdnk ampldliael eerywcnscq lgifrgstiy vdcyavvnep qskipgttls
      841 ikalelrfyg aevvshleeg vshvvvgedc srveemkalr rtfgkkfkiv selwvthsve
      901 egvtknenqy lv
//
LOCUS       XP_041324362             912 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA ligase 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324362
VERSION     XP_041324362.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468428.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="DNA ligase 4 isoform X1"
                     /calculated_mol_wt=103800
     Region          86..607
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          663..750
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          755..788
                     /region_name="DNA_ligase_IV"
                     /note="DNA ligase IV; pfam11411"
                     /db_xref="CDD:463272"
     Region          814..901
                     /region_name="BRCT_DNA_ligase_IV_rpt2"
                     /note="second BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17717"
                     /db_xref="CDD:349349"
     Site            order(815,836..838,840..841,844..845,847..848,896,
                     899..900)
                     /site_type="other"
                     /note="XRCC4 interaction site [polypeptide binding]"
                     /db_xref="CDD:349349"
     CDS             1..912
                     /gene="LIG4"
                     /coded_by="XM_041468428.1:146..2884"
                     /db_xref="GeneID:121354079"
ORIGIN      
        1 masapvsqpp pkktvashvp fadlcstler iqksksrpek tkyfkdflds wrkfhnalhq
       61 kekdvtdsfy pamrlilpql erermaygik etmlaklyie llslpkdgkd aakllnyrtp
      121 tgsrgdagdf amiayfvlkp rspkqgrlti eqvnehldai annnaaknkg qlkksllqli
      181 tqstaleqkw lirmiikdlk lgvsqqtifs ifhpdaaelh nvttdlekvc rqlhdpsvsl
      241 sdvsimlfsa fkpmlaaiad vqqiekqmsn qtfyietkld germqmhkdg dvykyfsrng
      301 fdytqqfgas plegsltpfi hnvfksniqn cildgemmay npeaqtfmqk gnkfdikrmv
      361 edsdlqtcfc vfdvlmvndq klghevlskr yeilssvftp vkgrihvvhk rnartrkevi
      421 dalneaidnr eegimvkdpm stykpdkrge gwlkikpeyv sglmdeldll ivggywgkgs
      481 rggmmshflc avaetpppne kptifhsicr vgsgytmkel ydlglklakh wkpyhrkdpp
      541 gnilcgaekp emyiepcnsv ivqikaaeiv dsdmyktdct lrfpriekir edkewyecmt
      601 sdmledlrnk aqgklaskhl hvdeydephe kkrktvskvr kvigiaeqfk apdlssvskv
      661 snvfedvefc vmtgigkysk selesriaqc ggsvvqnpgp etycvivgae nvrvkniias
      721 nkydvvraew llqcfqtkml vpwqpafmih mspdtkehfa reydcygdsy tantdvvqlk
      781 evfsrmkdnk ampldliael eerywcnscq lgifrgstiy vdcyavvnep qskipgttls
      841 ikalelrfyg aevvshleeg vshvvvgedc srveemkalr rtfgkkfkiv selwvthsve
      901 egvtknenqy lv
//
LOCUS       XP_041324363             912 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA ligase 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324363
VERSION     XP_041324363.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468429.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="DNA ligase 4 isoform X1"
                     /calculated_mol_wt=103800
     Region          86..607
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          663..750
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          755..788
                     /region_name="DNA_ligase_IV"
                     /note="DNA ligase IV; pfam11411"
                     /db_xref="CDD:463272"
     Region          814..901
                     /region_name="BRCT_DNA_ligase_IV_rpt2"
                     /note="second BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17717"
                     /db_xref="CDD:349349"
     Site            order(815,836..838,840..841,844..845,847..848,896,
                     899..900)
                     /site_type="other"
                     /note="XRCC4 interaction site [polypeptide binding]"
                     /db_xref="CDD:349349"
     CDS             1..912
                     /gene="LIG4"
                     /coded_by="XM_041468429.1:27..2765"
                     /db_xref="GeneID:121354079"
ORIGIN      
        1 masapvsqpp pkktvashvp fadlcstler iqksksrpek tkyfkdflds wrkfhnalhq
       61 kekdvtdsfy pamrlilpql erermaygik etmlaklyie llslpkdgkd aakllnyrtp
      121 tgsrgdagdf amiayfvlkp rspkqgrlti eqvnehldai annnaaknkg qlkksllqli
      181 tqstaleqkw lirmiikdlk lgvsqqtifs ifhpdaaelh nvttdlekvc rqlhdpsvsl
      241 sdvsimlfsa fkpmlaaiad vqqiekqmsn qtfyietkld germqmhkdg dvykyfsrng
      301 fdytqqfgas plegsltpfi hnvfksniqn cildgemmay npeaqtfmqk gnkfdikrmv
      361 edsdlqtcfc vfdvlmvndq klghevlskr yeilssvftp vkgrihvvhk rnartrkevi
      421 dalneaidnr eegimvkdpm stykpdkrge gwlkikpeyv sglmdeldll ivggywgkgs
      481 rggmmshflc avaetpppne kptifhsicr vgsgytmkel ydlglklakh wkpyhrkdpp
      541 gnilcgaekp emyiepcnsv ivqikaaeiv dsdmyktdct lrfpriekir edkewyecmt
      601 sdmledlrnk aqgklaskhl hvdeydephe kkrktvskvr kvigiaeqfk apdlssvskv
      661 snvfedvefc vmtgigkysk selesriaqc ggsvvqnpgp etycvivgae nvrvkniias
      721 nkydvvraew llqcfqtkml vpwqpafmih mspdtkehfa reydcygdsy tantdvvqlk
      781 evfsrmkdnk ampldliael eerywcnscq lgifrgstiy vdcyavvnep qskipgttls
      841 ikalelrfyg aevvshleeg vshvvvgedc srveemkalr rtfgkkfkiv selwvthsve
      901 egvtknenqy lv
//
LOCUS       XP_041324364             840 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA ligase 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324364
VERSION     XP_041324364.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468430.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..840
                     /product="DNA ligase 4 isoform X2"
                     /calculated_mol_wt=95525
     Region          14..535
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          591..678
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          683..716
                     /region_name="DNA_ligase_IV"
                     /note="DNA ligase IV; pfam11411"
                     /db_xref="CDD:463272"
     Region          742..829
                     /region_name="BRCT_DNA_ligase_IV_rpt2"
                     /note="second BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17717"
                     /db_xref="CDD:349349"
     Site            order(743,764..766,768..769,772..773,775..776,824,
                     827..828)
                     /site_type="other"
                     /note="XRCC4 interaction site [polypeptide binding]"
                     /db_xref="CDD:349349"
     CDS             1..840
                     /gene="LIG4"
                     /coded_by="XM_041468430.1:319..2841"
                     /db_xref="GeneID:121354079"
ORIGIN      
        1 mrlilpqler ermaygiket mlaklyiell slpkdgkdaa kllnyrtptg srgdagdfam
       61 iayfvlkprs pkqgrltieq vnehldaian nnaaknkgql kksllqlitq staleqkwli
      121 rmiikdlklg vsqqtifsif hpdaaelhnv ttdlekvcrq lhdpsvslsd vsimlfsafk
      181 pmlaaiadvq qiekqmsnqt fyietkldge rmqmhkdgdv ykyfsrngfd ytqqfgaspl
      241 egsltpfihn vfksniqnci ldgemmaynp eaqtfmqkgn kfdikrmved sdlqtcfcvf
      301 dvlmvndqkl ghevlskrye ilssvftpvk grihvvhkrn artrkevida lneaidnree
      361 gimvkdpmst ykpdkrgegw lkikpeyvsg lmdeldlliv ggywgkgsrg gmmshflcav
      421 aetpppnekp tifhsicrvg sgytmkelyd lglklakhwk pyhrkdppgn ilcgaekpem
      481 yiepcnsviv qikaaeivds dmyktdctlr fpriekired kewyecmtsd mledlrnkaq
      541 gklaskhlhv deydephekk rktvskvrkv igiaeqfkap dlssvskvsn vfedvefcvm
      601 tgigkyskse lesriaqcgg svvqnpgpet ycvivgaenv rvkniiasnk ydvvraewll
      661 qcfqtkmlvp wqpafmihms pdtkehfare ydcygdsyta ntdvvqlkev fsrmkdnkam
      721 pldliaelee rywcnscqlg ifrgstiyvd cyavvnepqs kipgttlsik alelrfygae
      781 vvshleegvs hvvvgedcsr veemkalrrt fgkkfkivse lwvthsveeg vtknenqylv
//
LOCUS       XP_041324365             840 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA ligase 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324365
VERSION     XP_041324365.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468431.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..840
                     /product="DNA ligase 4 isoform X2"
                     /calculated_mol_wt=95525
     Region          14..535
                     /region_name="dnl1"
                     /note="DNA ligase I, ATP-dependent (dnl1); TIGR00574"
                     /db_xref="CDD:273147"
     Region          591..678
                     /region_name="BRCT_DNA_ligase_IV_rpt1"
                     /note="first BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17722"
                     /db_xref="CDD:349354"
     Region          683..716
                     /region_name="DNA_ligase_IV"
                     /note="DNA ligase IV; pfam11411"
                     /db_xref="CDD:463272"
     Region          742..829
                     /region_name="BRCT_DNA_ligase_IV_rpt2"
                     /note="second BRCT domain of DNA ligase 4 (LIG4) and
                     similar proteins; cd17717"
                     /db_xref="CDD:349349"
     Site            order(743,764..766,768..769,772..773,775..776,824,
                     827..828)
                     /site_type="other"
                     /note="XRCC4 interaction site [polypeptide binding]"
                     /db_xref="CDD:349349"
     CDS             1..840
                     /gene="LIG4"
                     /coded_by="XM_041468431.1:167..2689"
                     /db_xref="GeneID:121354079"
ORIGIN      
        1 mrlilpqler ermaygiket mlaklyiell slpkdgkdaa kllnyrtptg srgdagdfam
       61 iayfvlkprs pkqgrltieq vnehldaian nnaaknkgql kksllqlitq staleqkwli
      121 rmiikdlklg vsqqtifsif hpdaaelhnv ttdlekvcrq lhdpsvslsd vsimlfsafk
      181 pmlaaiadvq qiekqmsnqt fyietkldge rmqmhkdgdv ykyfsrngfd ytqqfgaspl
      241 egsltpfihn vfksniqnci ldgemmaynp eaqtfmqkgn kfdikrmved sdlqtcfcvf
      301 dvlmvndqkl ghevlskrye ilssvftpvk grihvvhkrn artrkevida lneaidnree
      361 gimvkdpmst ykpdkrgegw lkikpeyvsg lmdeldlliv ggywgkgsrg gmmshflcav
      421 aetpppnekp tifhsicrvg sgytmkelyd lglklakhwk pyhrkdppgn ilcgaekpem
      481 yiepcnsviv qikaaeivds dmyktdctlr fpriekired kewyecmtsd mledlrnkaq
      541 gklaskhlhv deydephekk rktvskvrkv igiaeqfkap dlssvskvsn vfedvefcvm
      601 tgigkyskse lesriaqcgg svvqnpgpet ycvivgaenv rvkniiasnk ydvvraewll
      661 qcfqtkmlvp wqpafmihms pdtkehfare ydcygdsyta ntdvvqlkev fsrmkdnkam
      721 pldliaelee rywcnscqlg ifrgstiyvd cyavvnepqs kipgttlsik alelrfygae
      781 vvshleegvs hvvvgedcsr veemkalrrt fgkkfkivse lwvthsveeg vtknenqylv
//
LOCUS       XP_041324366             337 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ABHD13 [Pyrgilauda ruficollis].
ACCESSION   XP_041324366
VERSION     XP_041324366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="protein ABHD13"
                     /calculated_mol_wt=38262
     Region          76..317
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..337
                     /gene="ABHD13"
                     /coded_by="XM_041468432.1:203..1216"
                     /db_xref="GeneID:121354080"
ORIGIN      
        1 mekswmlwtf vkrwllalas wswslcricl lplivtfhly ggvillilif vsiagilykf
       61 qdvllyfpeq psssrlyvpm ptgiphenif iktkdgvlln lillrytgdn aaysptiiyf
      121 hgnagnighr lpnallmlvn lkvnlilvdy rgygksegea seeglyldse avldyvmtrs
      181 dldktkiflf grslggavai hlasenshri saivventfl sipymastlf sffpmrylpl
      241 wcyknkflsy rkisqcrmps lfisglsdql ippvmmkqly elspartkrl aifpdgthnd
      301 twqcqgyfta leqfikevik shspeemakt ssnvtii
//
LOCUS       XP_041324367             337 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ABHD13 [Pyrgilauda ruficollis].
ACCESSION   XP_041324367
VERSION     XP_041324367.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468433.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="protein ABHD13"
                     /calculated_mol_wt=38262
     Region          76..317
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..337
                     /gene="ABHD13"
                     /coded_by="XM_041468433.1:181..1194"
                     /db_xref="GeneID:121354080"
ORIGIN      
        1 mekswmlwtf vkrwllalas wswslcricl lplivtfhly ggvillilif vsiagilykf
       61 qdvllyfpeq psssrlyvpm ptgiphenif iktkdgvlln lillrytgdn aaysptiiyf
      121 hgnagnighr lpnallmlvn lkvnlilvdy rgygksegea seeglyldse avldyvmtrs
      181 dldktkiflf grslggavai hlasenshri saivventfl sipymastlf sffpmrylpl
      241 wcyknkflsy rkisqcrmps lfisglsdql ippvmmkqly elspartkrl aifpdgthnd
      301 twqcqgyfta leqfikevik shspeemakt ssnvtii
//
LOCUS       XP_041324368             337 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ABHD13 [Pyrgilauda ruficollis].
ACCESSION   XP_041324368
VERSION     XP_041324368.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468434.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="protein ABHD13"
                     /calculated_mol_wt=38262
     Region          76..317
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..337
                     /gene="ABHD13"
                     /coded_by="XM_041468434.1:167..1180"
                     /db_xref="GeneID:121354080"
ORIGIN      
        1 mekswmlwtf vkrwllalas wswslcricl lplivtfhly ggvillilif vsiagilykf
       61 qdvllyfpeq psssrlyvpm ptgiphenif iktkdgvlln lillrytgdn aaysptiiyf
      121 hgnagnighr lpnallmlvn lkvnlilvdy rgygksegea seeglyldse avldyvmtrs
      181 dldktkiflf grslggavai hlasenshri saivventfl sipymastlf sffpmrylpl
      241 wcyknkflsy rkisqcrmps lfisglsdql ippvmmkqly elspartkrl aifpdgthnd
      301 twqcqgyfta leqfikevik shspeemakt ssnvtii
//
LOCUS       XP_041324369             577 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-5 receptor subunit alpha-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324369
VERSION     XP_041324369.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468435.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..577
                     /product="interleukin-5 receptor subunit alpha-like
                     isoform X1"
                     /calculated_mol_wt=66135
     Region          290..384
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          388..476
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(467..468,470..471)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..577
                     /gene="LOC121354082"
                     /coded_by="XM_041468435.1:1..1734"
                     /db_xref="GeneID:121354082"
ORIGIN      
        1 mtaapcckcp scffmemliw dtaigiihsp vclekcllas lsplsrhfig havgiagphn
       61 trssvtfpvr lccsnrkctg cfqvqhhmpk gychvqeyqp talacrraap sfalasfvpw
      121 sptsrhspvl icppsqakrc rgahgltsik tkpahtvqhh gvggrrrtcs lhtewrsapq
      181 sctkdalrlr nvlwatkdds rvilswnnnl tneeikkytv kyilsykffn takerkerlq
      241 ekekiirlql hsgfnakvkt qlfaketedt ieesdwteft ykappvyiqn lsciiynisf
      301 fnctwhikae apediqiffs ykhvgkvfac qqyiknarkk nigcymtqmh fqpsrkinln
      361 itvrnltnss rgpsyyksft pqtieklnpp invsvltent sikihwkppp tigsarkkcf
      421 lyqvkitdhk ianvtaenyk ypfhkpakrc aaqvrvkkei ciankiwsew sepviihdek
      481 tmdilllslv lfcalaflgg llihacrryr clevlttpvp hpsnniktwl adethhqqhi
      541 smqmemnsei tletpeenrd eniqlqkylk efvledl
//
LOCUS       XP_041324370             427 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-5 receptor subunit alpha-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324370
VERSION     XP_041324370.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468436.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..427
                     /product="interleukin-5 receptor subunit alpha-like
                     isoform X2"
                     /calculated_mol_wt=49764
     Region          140..234
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          238..326
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(317..318,320..321)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..427
                     /gene="LOC121354082"
                     /coded_by="XM_041468436.1:305..1588"
                     /db_xref="GeneID:121354082"
ORIGIN      
        1 marvavipvl lilsffqhkt lfstilasgk edikdalrlr nvlwatkdds rvilswnnnl
       61 tneeikkytv kyilsykffn takerkerlq ekekiirlql hsgfnakvkt qlfaketedt
      121 ieesdwteft ykappvyiqn lsciiynisf fnctwhikae apediqiffs ykhvgkvfac
      181 qqyiknarkk nigcymtqmh fqpsrkinln itvrnltnss rgpsyyksft pqtieklnpp
      241 invsvltent sikihwkppp tigsarkkcf lyqvkitdhk ianvtaenyk ypfhkpakrc
      301 aaqvrvkkei ciankiwsew sepviihdek tmdilllslv lfcalaflgg llihacrryr
      361 clevlttpvp hpsnniktwl adethhqqhi smqmemnsei tletpeenrd eniqlqkylk
      421 efvledl
//
LOCUS       XP_041324371             427 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-5 receptor subunit alpha-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324371
VERSION     XP_041324371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468437.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..427
                     /product="interleukin-5 receptor subunit alpha-like
                     isoform X2"
                     /calculated_mol_wt=49764
     Region          140..234
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          238..326
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(317..318,320..321)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..427
                     /gene="LOC121354082"
                     /coded_by="XM_041468437.1:749..2032"
                     /db_xref="GeneID:121354082"
ORIGIN      
        1 marvavipvl lilsffqhkt lfstilasgk edikdalrlr nvlwatkdds rvilswnnnl
       61 tneeikkytv kyilsykffn takerkerlq ekekiirlql hsgfnakvkt qlfaketedt
      121 ieesdwteft ykappvyiqn lsciiynisf fnctwhikae apediqiffs ykhvgkvfac
      181 qqyiknarkk nigcymtqmh fqpsrkinln itvrnltnss rgpsyyksft pqtieklnpp
      241 invsvltent sikihwkppp tigsarkkcf lyqvkitdhk ianvtaenyk ypfhkpakrc
      301 aaqvrvkkei ciankiwsew sepviihdek tmdilllslv lfcalaflgg llihacrryr
      361 clevlttpvp hpsnniktwl adethhqqhi smqmemnsei tletpeenrd eniqlqkylk
      421 efvledl
//
LOCUS       XP_041324373             427 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-5 receptor subunit alpha-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324373
VERSION     XP_041324373.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468439.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..427
                     /product="interleukin-5 receptor subunit alpha-like
                     isoform X2"
                     /calculated_mol_wt=49764
     Region          140..234
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          238..326
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(317..318,320..321)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..427
                     /gene="LOC121354082"
                     /coded_by="XM_041468439.1:231..1514"
                     /db_xref="GeneID:121354082"
ORIGIN      
        1 marvavipvl lilsffqhkt lfstilasgk edikdalrlr nvlwatkdds rvilswnnnl
       61 tneeikkytv kyilsykffn takerkerlq ekekiirlql hsgfnakvkt qlfaketedt
      121 ieesdwteft ykappvyiqn lsciiynisf fnctwhikae apediqiffs ykhvgkvfac
      181 qqyiknarkk nigcymtqmh fqpsrkinln itvrnltnss rgpsyyksft pqtieklnpp
      241 invsvltent sikihwkppp tigsarkkcf lyqvkitdhk ianvtaenyk ypfhkpakrc
      301 aaqvrvkkei ciankiwsew sepviihdek tmdilllslv lfcalaflgg llihacrryr
      361 clevlttpvp hpsnniktwl adethhqqhi smqmemnsei tletpeenrd eniqlqkylk
      421 efvledl
//
LOCUS       XP_041324374             456 aa            linear   VRT 06-MAY-2021
DEFINITION  granulocyte-macrophage colony-stimulating factor receptor subunit
            alpha-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324374
VERSION     XP_041324374.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468440.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="granulocyte-macrophage colony-stimulating factor
                     receptor subunit alpha-like isoform X1"
                     /calculated_mol_wt=52640
     Region          95..159
                     /region_name="IL3Ra_N"
                     /note="IL-3 receptor alpha chain N-terminal domain;
                     pfam18611"
                     /db_xref="CDD:436618"
     Region          182..276
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          281..377
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(368..369,371..372)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..456
                     /gene="LOC121354083"
                     /coded_by="XM_041468440.1:1554..2924"
                     /db_xref="GeneID:121354083"
ORIGIN      
        1 missrevvni cqsgnlrklk sskgndkvss fltcsifylv lscsktkltg rakhfqisac
       61 dyyytlkrpc cckpkpnkvk eesfprgada qespitnvnv dwrkielswe ssrnfseykc
      121 iimgrdmdym dtevdsplcs fpvelhmpmh kgvtfiievp ntniskqcsf lpggmkgsai
      181 enfscvlyni flmnctwqag rdapadtqyf lywqksrvdn qmecelyikd encrnvgcif
      241 qnvsigieka yyflvngssk dsliqfydey idlyeieilt aplnvtahct rdptgciitw
      301 hppltshven tkcfqyeisi qnkdepkeek nlpcvrndry efqnynekkr ytlkirargk
      361 nclvssnwge wsepiefgqg kdyfifvilf lialgtisit lllyclfkry csfknlfppi
      421 pqprdkfnal tdediqteyv nlptkshaek ittiee
//
LOCUS       XP_041324375             398 aa            linear   VRT 06-MAY-2021
DEFINITION  granulocyte-macrophage colony-stimulating factor receptor subunit
            alpha-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324375
VERSION     XP_041324375.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468441.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="granulocyte-macrophage colony-stimulating factor
                     receptor subunit alpha-like isoform X2"
                     /calculated_mol_wt=46325
     Region          37..101
                     /region_name="IL3Ra_N"
                     /note="IL-3 receptor alpha chain N-terminal domain;
                     pfam18611"
                     /db_xref="CDD:436618"
     Region          124..218
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          223..319
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(310..311,313..314)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..398
                     /gene="LOC121354083"
                     /coded_by="XM_041468441.1:144..1340"
                     /db_xref="GeneID:121354083"
ORIGIN      
        1 mfdtlglicm ilwymmlfhp lhadiqcmes daqespitnv nvdwrkiels wessrnfsey
       61 kciimgrdmd ymdtevdspl csfpvelhmp mhkgvtfiie vpntniskqc sflpggmkgs
      121 aienfscvly niflmnctwq agrdapadtq yflywqksrv dnqmecelyi kdencrnvgc
      181 ifqnvsigie kayyflvngs skdsliqfyd eyidlyeiei ltaplnvtah ctrdptgcii
      241 twhppltshv entkcfqyei siqnkdepke eknlpcvrnd ryefqnynek krytlkirar
      301 gknclvssnw gewsepiefg qgkdyfifvi lflialgtis itlllyclfk rycsfknlfp
      361 pipqprdkfn altdediqte yvnlptksha ekittiee
//
LOCUS       XP_041324376             397 aa            linear   VRT 06-MAY-2021
DEFINITION  granulocyte-macrophage colony-stimulating factor receptor subunit
            alpha-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324376
VERSION     XP_041324376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468442.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..397
                     /product="granulocyte-macrophage colony-stimulating factor
                     receptor subunit alpha-like isoform X3"
                     /calculated_mol_wt=46286
     Region          36..100
                     /region_name="IL3Ra_N"
                     /note="IL-3 receptor alpha chain N-terminal domain;
                     pfam18611"
                     /db_xref="CDD:436618"
     Region          123..217
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          222..318
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(309..310,312..313)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..397
                     /gene="LOC121354083"
                     /coded_by="XM_041468442.1:33..1226"
                     /db_xref="GeneID:121354083"
ORIGIN      
        1 mfdtlglicm ilwymmlfhp lhadiqcmey aqespitnvn vdwrkielsw essrnfseyk
       61 ciimgrdmdy mdtevdsplc sfpvelhmpm hkgvtfiiev pntniskqcs flpggmkgsa
      121 ienfscvlyn iflmnctwqa grdapadtqy flywqksrvd nqmecelyik dencrnvgci
      181 fqnvsigiek ayyflvngss kdsliqfyde yidlyeieil taplnvtahc trdptgciit
      241 whppltshve ntkcfqyeis iqnkdepkee knlpcvrndr yefqnynekk rytlkirarg
      301 knclvssnwg ewsepiefgq gkdyfifvil flialgtisi tlllyclfkr ycsfknlfpp
      361 ipqprdkfna ltdediqtey vnlptkshae kittiee
//
LOCUS       XP_041324377             298 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP/ATP translocase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324377
VERSION     XP_041324377.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468443.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..298
                     /product="ADP/ATP translocase 3"
                     /calculated_mol_wt=32603
     Region          3..298
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..298
                     /gene="SLC25A6"
                     /coded_by="XM_041468443.1:76..972"
                     /db_xref="GeneID:121354084"
ORIGIN      
        1 madqaisflk dflaggvaaa isktavapie rvklllqvqh askqiaadkq ykgiidcvvr
       61 ipkeqgvlsf wrgnlanvir yfptqalnfa fkdkykqvfl ggvdkhtqfw ryfagnlasg
      121 gaagatslcf vypldfartr laadvgkaga drefsglgdc lvkitksdgv rglyqgfnvs
      181 vqgiiiyraa yfgiydtakg mlpdprnthi viswmiaqtv tavagvvsyp fdtvrrrmmm
      241 qsgrkgadim ysgtidcwrk iardeggkaf fkgawsnvlr gmggafvlvl ydefkkvi
//
LOCUS       XP_041324378             497 aa            linear   VRT 06-MAY-2021
DEFINITION  granulocyte-macrophage colony-stimulating factor receptor subunit
            alpha-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324378
VERSION     XP_041324378.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468444.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="granulocyte-macrophage colony-stimulating factor
                     receptor subunit alpha-like"
                     /calculated_mol_wt=56903
     Region          8..101
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          217..310
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     CDS             1..497
                     /gene="LOC121354085"
                     /coded_by="XM_041468444.1:1..1494"
                     /db_xref="GeneID:121354085"
ORIGIN      
        1 mngtaienfa cvifnvsfmn ctwhvgrtat edtqyflywr swkkedvtec qnyikdiygr
       61 htgcqfqnvt iennnayflv ngsrsgqsiq syekkillyk iekltpplnv tvncteashr
      121 csiwwqpprt shvkkkscfk yeivienkad aekntkttsq taaiiennsy lyesfssekr
      181 ysikiratda gfclvspnwg ewstpvefgm kgsaignfsc vlyniflmnc twqagrdapa
      241 dtqyflywqk srvdnqmece lyikdencrn vgcifqnvsi giekayflvn gsskdsliqf
      301 ydeyidlyki eklmspsnit vncdeiknyc iiqwqrpqis hsnkdmcfky eisikykdnp
      361 kgkpiytsiq egensniflr sntrkkyvlk mraagsacfv npawgewsap vefgneeiis
      421 sslwillgva vatplmaiit fffckrtgcw kaafpqipgp kpafftladt npelmeskiq
      481 sitseneeil lvadivs
//
LOCUS       XP_041324379             632 aa            linear   VRT 06-MAY-2021
DEFINITION  probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase
            protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324379
VERSION     XP_041324379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468445.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..632
                     /product="probable bifunctional dTTP/UTP
                     pyrophosphatase/methyltransferase protein isoform X1"
                     /calculated_mol_wt=70027
     Region          15..208
                     /region_name="Maf"
                     /note="Nucleotide binding protein Maf. Maf has been
                     implicated in inhibition of septum formation in
                     eukaryotes, bacteria and archaea, but homologs in
                     B.subtilis and S.cerevisiae are nonessential for cell
                     division. Maf has been predicted to be a nucleotide-
                     or...; cd00555"
                     /db_xref="CDD:238310"
     Site            order(19,24,44,65,88,100)
                     /site_type="active"
                     /db_xref="CDD:238310"
     Site            order(59,133,141..145)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238310"
     Region          301..384
                     /region_name="dimerization2"
                     /note="dimerization domain; pfam16864"
                     /db_xref="CDD:465287"
     Region          401..608
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(470..476,494..495,520..522,537)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..632
                     /gene="ASMTL"
                     /coded_by="XM_041468445.1:58..1956"
                     /db_xref="GeneID:121354086"
ORIGIN      
        1 mvlnpvlgkl vskrvvlasa sprrreiltn vglrfevvps wfketlekss ftapyeyave
       61 takqkaleva nrmhvkhmrt pdivigadti vsvdeqilek padkqdayrm lsrlngkehs
      121 vftgvaiihc rskdsqleme itdfyeetkv kfselseell weyihsgepm dkaggygiqa
      181 lggmlveyvh gdflnvvgfp lnhfckklae lyyppskhni qhkkydsips vdtfenlsdg
      241 esessnfteh kvsskldhsg mhssgpayts ektsavrtgf tvplenqngv sqsasklpsk
      301 ilelmdgfra skalfvaskl kifdhlkdkg pvkavdiand vgasvcgter lldacaslgl
      361 lektpqgysn tdsantylts dgkyslhgyi ihsndhlwpl ftnlesavke gsrqnhrafg
      421 kkaddlfkdy yhsqeakqrf maamhsiahl tardvatafd lsqfksacdl ggctgalahe
      481 lvqvypnlkv tvfdlpevia ntsyfqpsgq htapvtfvsg dffkdnlpea dlyilsrvlh
      541 dwpdekihvl lskisavcrp gsallvaetv ldeqkthpsv avlqslsmte gkqrssseyk
      601 qllekygftd vqikitgnll davlcfkknl sl
//
LOCUS       XP_041324381             631 aa            linear   VRT 06-MAY-2021
DEFINITION  probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase
            protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324381
VERSION     XP_041324381.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468447.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="probable bifunctional dTTP/UTP
                     pyrophosphatase/methyltransferase protein isoform X2"
                     /calculated_mol_wt=70016
     Region          15..208
                     /region_name="Maf"
                     /note="Nucleotide binding protein Maf. Maf has been
                     implicated in inhibition of septum formation in
                     eukaryotes, bacteria and archaea, but homologs in
                     B.subtilis and S.cerevisiae are nonessential for cell
                     division. Maf has been predicted to be a nucleotide-
                     or...; cd00555"
                     /db_xref="CDD:238310"
     Site            order(19,24,44,65,88,100)
                     /site_type="active"
                     /db_xref="CDD:238310"
     Site            order(59,133,141..145)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238310"
     Region          301..384
                     /region_name="dimerization2"
                     /note="dimerization domain; pfam16864"
                     /db_xref="CDD:465287"
     Region          401..611
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(470..476,494..495,520..522,537)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..631
                     /gene="ASMTL"
                     /coded_by="XM_041468447.1:57..1952"
                     /db_xref="GeneID:121354086"
ORIGIN      
        1 mvlnpvlgkl vskrvvlasa sprrreiltn vglrfevvps wfketlekss ftapyeyave
       61 takqkaleva nrmhvkhmrt pdivigadti vsvdeqilek padkqdayrm lsrlngkehs
      121 vftgvaiihc rskdsqleme itdfyeetkv kfselseell weyihsgepm dkaggygiqa
      181 lggmlveyvh gdflnvvgfp lnhfckklae lyyppskhni qhkkydsips vdtfenlsdg
      241 esessnfteh kvsskldhsg mhssgpayts ektsavrtgf tvplenqngv sqsasklpsk
      301 ilelmdgfra skalfvaskl kifdhlkdkg pvkavdiand vgasvcgter lldacaslgl
      361 lektpqgysn tdsantylts dgkyslhgyi ihsndhlwpl ftnlesavke gsrqnhrafg
      421 kkaddlfkdy yhsqeakqrf maamhsiahl tardvatafd lsqfksacdl ggctgalahe
      481 lvqvypnlkv tvfdlpevia ntsyfqpsgq htapvtfvsg dffkdnlpea dlyilsrvlh
      541 dwpdekihvl lskisavcrp gcaillaemv lddekkkrsk allqslnmlv qtegkersgs
      601 eyqalleqhg ftnvkiritg nlldvilcvk t
//
LOCUS       XP_041324382             581 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2A regulatory subunit B''
            subunit beta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324382
VERSION     XP_041324382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468448.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="serine/threonine-protein phosphatase 2A
                     regulatory subunit B'' subunit beta isoform X1"
                     /calculated_mol_wt=67192
     Region          137..491
                     /region_name="PPP2R3B"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B' subunit beta; cd21507"
                     /db_xref="CDD:410340"
     CDS             1..581
                     /gene="PPP2R3B"
                     /coded_by="XM_041468448.1:11..1756"
                     /db_xref="GeneID:121354087"
ORIGIN      
        1 mspgkvlqpa vkmkvdelfl cwlsqpatqv ilkdclrrik nkektefgna dsgnsknesl
       61 tsensnykqc ilgdtrlplm slsppqlstt lplatpassr sisnvratrr ssgtkevqtk
      121 keetlppshs qniptfyfpr gcpkekvnid aviakiektf sefpneratl edmgkvakac
      181 ecplywkgpl fycaggertg yvsvhkfvam wrkvlqtcyd daakfvhllm npgcnylvqe
      241 dfipflqdvv nshpglsflk easefhsryi ttviqrifyt vnrswsgkit cnelrksnfl
      301 qnvalleeea dinqlteyfs yehfyviyck fweldtdhdl yidrkdlarh ndyaisnrmi
      361 erifsgavtr grkaqkdgki syadfvwfli seedkktpts ieywfrcmdl dgdgalsmye
      421 leyfyeeqcq klenmaiepl pfedclcqml dlvkpqhegk itlhdlkrck ltnvffdtff
      481 niekyldheq kdqfsmlrdg egesqevsdw ekyaaeeygi lvaeeaasdq wndgyeaeln
      541 pvdhqkasvl kyqtekrpff empshladvd ldeydydedf e
//
LOCUS       XP_041324383             514 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 2A regulatory subunit B''
            subunit beta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324383
VERSION     XP_041324383.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468449.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..514
                     /product="serine/threonine-protein phosphatase 2A
                     regulatory subunit B'' subunit beta isoform X2"
                     /calculated_mol_wt=60259
     Region          70..424
                     /region_name="PPP2R3B"
                     /note="serine/threonine protein phosphatase 2A regulatory
                     subunit B' subunit beta; cd21507"
                     /db_xref="CDD:410340"
     CDS             1..514
                     /gene="PPP2R3B"
                     /coded_by="XM_041468449.1:201..1745"
                     /db_xref="GeneID:121354087"
ORIGIN      
        1 mksesmrike islrqdpdlr kelallargc dfvlpsrfkk rlkafqqvqv qtkkeetlpp
       61 shsqniptfy fprgcpkekv nidaviakie ktfsefpner atledmgkva kacecplywk
      121 gplfycagge rtgyvsvhkf vamwrkvlqt cyddaakfvh llmnpgcnyl vqedfipflq
      181 dvvnshpgls flkeasefhs ryittviqri fytvnrswsg kitcnelrks nflqnvalle
      241 eeadinqlte yfsyehfyvi yckfweldtd hdlyidrkdl arhndyaisn rmierifsga
      301 vtrgrkaqkd gkisyadfvw fliseedkkt ptsieywfrc mdldgdgals myeleyfyee
      361 qcqklenmai eplpfedclc qmldlvkpqh egkitlhdlk rckltnvffd tffniekyld
      421 heqkdqfsml rdgegesqev sdwekyaaee ygilvaeeaa sdqwndgyea elnpvdhqka
      481 svlkyqtekr pffempshla dvdldeydyd edfe
//
LOCUS       XP_041324384             623 aa            linear   VRT 06-MAY-2021
DEFINITION  cell division cycle protein 16 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324384
VERSION     XP_041324384.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468450.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="cell division cycle protein 16 homolog"
                     /calculated_mol_wt=72151
     Region          15..94
                     /region_name="ANAPC3"
                     /note="Anaphase-promoting complex, cyclosome, subunit 3;
                     pfam12895"
                     /db_xref="CDD:463743"
     Region          36..65
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          70..94
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          276..>441
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          299..330
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          337..363
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          368..398
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          374..>523
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          403..431
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(404,407..408,411..412,414,438,450..451,454..455,
                     457..458,481,484..485,488..489,492)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          436..475
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          480..507
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..623
                     /gene="CDC16"
                     /coded_by="XM_041468450.1:72..1943"
                     /db_xref="GeneID:121354088"
ORIGIN      
        1 mnlerlrkrv rhyidqqqyq salfwadkva slsheepqdi ywlaqclylt aqyhraahal
       61 rsrkldklye acrylaarch yaakehqqal dildmeepin krlfekylkd esglkdsttd
      121 wemsqssiks sicllrgkiy daldnrtlat ysykealkld vycfeafdll tshhmltaqe
      181 ekelleslpl nrqcteeeqe llhflfenkl kkynkpsetl ipesvdglqe nldvvvslae
      241 rhyyncdfkm cykltsvvme kdpfhanclp vhigtlveln kanelfylsh klvdlypnnp
      301 vswfavgcyy lmvghkneha rrylskattl ertygpawia yghsfavese hdqamaayft
      361 aaqlmkgchl pmlyigleyg ltnnsklaer ffsqalsiap edpfvmhevg vvafqngdwk
      421 taekwfldal ekikaignev tvdkweplln nlghvcrklk kyeealeyhr qalvlipqna
      481 stysaigyih slmgnfesai dyfhtalglr rddtfsvtml ghciemyigd seayigteik
      541 dklrcydfdv htvktlknii sppwdfrefd ierqtldesg ivtletsnqr kstdtsrple
      601 etfeiemnes dmmletsmsd hst
//
LOCUS       XP_041324385             863 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming growth factor-beta receptor-associated protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324385
VERSION     XP_041324385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..863
                     /product="transforming growth factor-beta
                     receptor-associated protein 1"
                     /calculated_mol_wt=98163
     Region          33..282
                     /region_name="CNH"
                     /note="CNH domain; cl02434"
                     /db_xref="CDD:470577"
     Region          447..549
                     /region_name="Vps39_1"
                     /note="Vacuolar sorting protein 39 domain 1; pfam10366"
                     /db_xref="CDD:371008"
     Region          737..845
                     /region_name="Vps39_2"
                     /note="Vacuolar sorting protein 39 domain 2; pfam10367"
                     /db_xref="CDD:402126"
     CDS             1..863
                     /gene="TGFBRAP1"
                     /coded_by="XM_041468451.1:183..2774"
                     /db_xref="GeneID:121354089"
ORIGIN      
        1 msvkafklvs averemlmgd knyiniecie ccgknlyigt ndcfiyhfll dekvstagki
       61 tfaatkqlhk ylglkkpvse lkaasaltrl lvlcdntitl vnminlepvp tgarikgavt
      121 ftlnenpvsg dpfcvevcii svkrrtiqmf mvfedrvqiv kevftpeqpc avavdgyylc
      181 lalttqyiil nyntgvsqdl fpycsdekrp ivkrigrqef llagpgglgm fatvdgisqr
      241 apvhwsenvi gaalcfpyvv alddefitvh smldqqqkqt lpfkeghilq dfegkvivat
      301 nkgvyilvpl plekqiqdll ashrveealv lakgarrnip kekfqvmykr ilqqagfiqf
      361 aqlqfleake lfrsgqldvr elislypfll ptsssfirth pplheyadln qltqgdqekm
      421 tkckrflmsy lnevrsteva ngykedidta llklyaeanh eslldllvse nfclltdsaa
      481 wlekhkkyfa lgllyhyngq daaalqlwvk ivdgdiqdst rsdlydyivd fltfcsdqel
      541 vwkysewilq kneevgvqif tkrpleeqek nnfnpddiis clnkypkarv kylehlvler
      601 kiqkekyhth lavlyleail qlksettdnc tettelllkl rsllqksdly rirfildkiq
      661 gtdlhmesai lygkleehek alyilvhelk dfhaaeeycm wnsenrdlqy rrrlfhmlls
      721 vyltpgtsdc alvmaavdll nnhaaefdag lvlqvvpdsw svqllspfla gavrqsihtq
      781 rmtqvalgla qaenliykhe kvkqkgapil lsdkkvcqvc qnpfcepvfv rypngsvaht
      841 hcaanrhpns nvthhspsss nqt
//
LOCUS       XP_041324386             863 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming growth factor-beta receptor-associated protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324386
VERSION     XP_041324386.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468452.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..863
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..863
                     /product="transforming growth factor-beta
                     receptor-associated protein 1"
                     /calculated_mol_wt=98163
     Region          33..282
                     /region_name="CNH"
                     /note="CNH domain; cl02434"
                     /db_xref="CDD:470577"
     Region          447..549
                     /region_name="Vps39_1"
                     /note="Vacuolar sorting protein 39 domain 1; pfam10366"
                     /db_xref="CDD:371008"
     Region          737..845
                     /region_name="Vps39_2"
                     /note="Vacuolar sorting protein 39 domain 2; pfam10367"
                     /db_xref="CDD:402126"
     CDS             1..863
                     /gene="TGFBRAP1"
                     /coded_by="XM_041468452.1:40..2631"
                     /db_xref="GeneID:121354089"
ORIGIN      
        1 msvkafklvs averemlmgd knyiniecie ccgknlyigt ndcfiyhfll dekvstagki
       61 tfaatkqlhk ylglkkpvse lkaasaltrl lvlcdntitl vnminlepvp tgarikgavt
      121 ftlnenpvsg dpfcvevcii svkrrtiqmf mvfedrvqiv kevftpeqpc avavdgyylc
      181 lalttqyiil nyntgvsqdl fpycsdekrp ivkrigrqef llagpgglgm fatvdgisqr
      241 apvhwsenvi gaalcfpyvv alddefitvh smldqqqkqt lpfkeghilq dfegkvivat
      301 nkgvyilvpl plekqiqdll ashrveealv lakgarrnip kekfqvmykr ilqqagfiqf
      361 aqlqfleake lfrsgqldvr elislypfll ptsssfirth pplheyadln qltqgdqekm
      421 tkckrflmsy lnevrsteva ngykedidta llklyaeanh eslldllvse nfclltdsaa
      481 wlekhkkyfa lgllyhyngq daaalqlwvk ivdgdiqdst rsdlydyivd fltfcsdqel
      541 vwkysewilq kneevgvqif tkrpleeqek nnfnpddiis clnkypkarv kylehlvler
      601 kiqkekyhth lavlyleail qlksettdnc tettelllkl rsllqksdly rirfildkiq
      661 gtdlhmesai lygkleehek alyilvhelk dfhaaeeycm wnsenrdlqy rrrlfhmlls
      721 vyltpgtsdc alvmaavdll nnhaaefdag lvlqvvpdsw svqllspfla gavrqsihtq
      781 rmtqvalgla qaenliykhe kvkqkgapil lsdkkvcqvc qnpfcepvfv rypngsvaht
      841 hcaanrhpns nvthhspsss nqt
//
LOCUS       XP_041324387             582 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor-like 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324387
VERSION     XP_041324387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468453.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="interleukin-1 receptor-like 2 isoform X1"
                     /calculated_mol_wt=65946
     Region          44..137
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          61..65
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          77..81
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          102..106
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          116..121
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          129..132
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..239
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          161..165
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          180..183
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          199..203
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          213..218
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          230..233
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          246..347
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          264..268
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          277..281
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          329..334
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          342..345
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          403..559
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..582
                     /gene="LOC121354090"
                     /coded_by="XM_041468453.1:335..2083"
                     /db_xref="GeneID:121354090"
ORIGIN      
        1 magerekfsc lswqngqgnm aaktlfscni ataflsliia kkceaydvml kqslvpdgqp
       61 laikcsleks lksgdynltw ykvgnkravp rdklsrvhqq knliwflpam ledsgdyecv
      121 irnltsckkm ctkvtvferi dglclnekfa veeviftsss akvvcphldy frtekniqpv
      181 rwykdcqllk gkrfalsnsd liifnvtvhd ggnytcetty tyngkqynis rdislvvevt
      241 ppkkppeity prnnsievel gsqvtvdcnt tgadgyevyw tgngvyidvf ymsrifaspy
      301 egetsydgrp mhsvkliise vrsedyeqpf vcqasnafgq vasyiilkhr vpdirrwltg
      361 glvslliltf itliifkifr idlvlwyrns vcaltskedg kiydayvlyt kssedisicc
      421 letfvrrilp dvlekqcgyn lfilgrddlp geavvsvade tlkqsrrlmi ilgsetskgc
      481 lledtseqql amynalirdg iqviliemge iqdymsmpes iqfikqkhga iqwkgdfsek
      541 scsantsfwk nvryqmpsrk kasysevysl plmsnssaak es
//
LOCUS       XP_041324388             534 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor-like 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324388
VERSION     XP_041324388.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468454.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="interleukin-1 receptor-like 2 isoform X2"
                     /calculated_mol_wt=60703
     Region          1..89
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          13..17
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          29..33
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          54..58
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          68..73
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          81..84
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          101..191
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          113..117
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          132..135
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          151..155
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          165..170
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          182..185
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          198..299
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          229..233
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          281..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          294..297
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          355..511
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..534
                     /gene="LOC121354090"
                     /coded_by="XM_041468454.1:246..1850"
                     /db_xref="GeneID:121354090"
ORIGIN      
        1 mlkqslvpdg qplaikcsle kslksgdynl twykvgnkra vprdklsrvh qqknliwflp
       61 amledsgdye cvirnltsck kmctkvtvfe ridglclnek faveevifts ssakvvcphl
      121 dyfrtekniq pvrwykdcql lkgkrfalsn sdliifnvtv hdggnytcet tytyngkqyn
      181 isrdislvve vtppkkppei typrnnsiev elgsqvtvdc nttgadgyev ywtgngvyid
      241 vfymsrifas pyegetsydg rpmhsvklii sevrsedyeq pfvcqasnaf gqvasyiilk
      301 hrvpdirrwl tgglvsllil tfitliifki fridlvlwyr nsvcaltske dgkiydayvl
      361 ytkssedisi ccletfvrri lpdvlekqcg ynlfilgrdd lpgeavvsva detlkqsrrl
      421 miilgsetsk gclledtseq qlamynalir dgiqviliem geiqdymsmp esiqfikqkh
      481 gaiqwkgdfs ekscsantsf wknvryqmps rkkasysevy slplmsnssa akes
//
LOCUS       XP_041324389             575 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor type 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324389
VERSION     XP_041324389.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468455.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="interleukin-1 receptor type 1-like isoform X1"
                     /calculated_mol_wt=66441
     Region          30..123
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          46..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          63..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          88..92
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          102..107
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..118
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..230
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          147..151
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          166..170
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          204..209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          244..346
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          262..266
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          275..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          326..332
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..342
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          402..557
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..575
                     /gene="LOC121354092"
                     /coded_by="XM_041468455.1:484..2211"
                     /db_xref="GeneID:121354092"
ORIGIN      
        1 mektsrlqqn misiflfigh livliplfsa egcvicdyfv lvgepiaitc piitlpvlhs
       61 eynltwykng satavtterd arihqregll wfipamleds glyecnirsl nhsnkktinl
      121 tvfkndnglc fngkmkfeqk vtstntgkii cpdleqfkne dnnqpevhwy keckpgfled
      181 krlllaegen avlirnvtvq drgnytcrmv ytymgkqfnv srtislevkg fiflwlekpl
      241 qmqpefiypr nntievelgs hvvmecniss ginglipfwq vndedvdvfd ktyreqfyee
      301 glphglavsg tkfniskvkl kdyahkffch fiygsqqfta yikleypsqn iqgyltgggv
      361 slvflvfftl fiykifkidi vlwyrdscha flrkkvsdek iydayvlypk nresclyssd
      421 ifalkilpev lerqcgynlf ilgrddlpge avisvadeki rqsrrviivl vpepscysil
      481 edesekqlam hsaliqdgik vilielekiq dyatmpesir yikqkhgvir wkgdfsersh
      541 sartrfwkkv ryqmpsrksg slsqlhllsk dlnnk
//
LOCUS       XP_041324390             575 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor type 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324390
VERSION     XP_041324390.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468456.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="interleukin-1 receptor type 1-like isoform X1"
                     /calculated_mol_wt=66441
     Region          30..123
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          46..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          63..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          88..92
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          102..107
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..118
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..230
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          147..151
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          166..170
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          204..209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          244..346
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          262..266
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          275..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          326..332
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..342
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          402..557
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..575
                     /gene="LOC121354092"
                     /coded_by="XM_041468456.1:569..2296"
                     /db_xref="GeneID:121354092"
ORIGIN      
        1 mektsrlqqn misiflfigh livliplfsa egcvicdyfv lvgepiaitc piitlpvlhs
       61 eynltwykng satavtterd arihqregll wfipamleds glyecnirsl nhsnkktinl
      121 tvfkndnglc fngkmkfeqk vtstntgkii cpdleqfkne dnnqpevhwy keckpgfled
      181 krlllaegen avlirnvtvq drgnytcrmv ytymgkqfnv srtislevkg fiflwlekpl
      241 qmqpefiypr nntievelgs hvvmecniss ginglipfwq vndedvdvfd ktyreqfyee
      301 glphglavsg tkfniskvkl kdyahkffch fiygsqqfta yikleypsqn iqgyltgggv
      361 slvflvfftl fiykifkidi vlwyrdscha flrkkvsdek iydayvlypk nresclyssd
      421 ifalkilpev lerqcgynlf ilgrddlpge avisvadeki rqsrrviivl vpepscysil
      481 edesekqlam hsaliqdgik vilielekiq dyatmpesir yikqkhgvir wkgdfsersh
      541 sartrfwkkv ryqmpsrksg slsqlhllsk dlnnk
//
LOCUS       XP_041324391             575 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor type 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324391
VERSION     XP_041324391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="interleukin-1 receptor type 1-like isoform X1"
                     /calculated_mol_wt=66441
     Region          30..123
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          46..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          63..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          88..92
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          102..107
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..118
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..230
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          147..151
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          166..170
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          204..209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          244..346
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          262..266
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          275..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          326..332
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..342
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          402..557
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..575
                     /gene="LOC121354092"
                     /coded_by="XM_041468457.1:541..2268"
                     /db_xref="GeneID:121354092"
ORIGIN      
        1 mektsrlqqn misiflfigh livliplfsa egcvicdyfv lvgepiaitc piitlpvlhs
       61 eynltwykng satavtterd arihqregll wfipamleds glyecnirsl nhsnkktinl
      121 tvfkndnglc fngkmkfeqk vtstntgkii cpdleqfkne dnnqpevhwy keckpgfled
      181 krlllaegen avlirnvtvq drgnytcrmv ytymgkqfnv srtislevkg fiflwlekpl
      241 qmqpefiypr nntievelgs hvvmecniss ginglipfwq vndedvdvfd ktyreqfyee
      301 glphglavsg tkfniskvkl kdyahkffch fiygsqqfta yikleypsqn iqgyltgggv
      361 slvflvfftl fiykifkidi vlwyrdscha flrkkvsdek iydayvlypk nresclyssd
      421 ifalkilpev lerqcgynlf ilgrddlpge avisvadeki rqsrrviivl vpepscysil
      481 edesekqlam hsaliqdgik vilielekiq dyatmpesir yikqkhgvir wkgdfsersh
      541 sartrfwkkv ryqmpsrksg slsqlhllsk dlnnk
//
LOCUS       XP_041324392             568 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor type 1-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324392
VERSION     XP_041324392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="interleukin-1 receptor type 1-like isoform X2"
                     /calculated_mol_wt=65564
     Region          30..123
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          46..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          63..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          88..92
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          102..107
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..118
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..230
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          147..151
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          166..170
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          204..209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          237..339
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          255..259
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          268..273
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          304..308
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          319..325
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          332..335
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          395..550
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..568
                     /gene="LOC121354092"
                     /coded_by="XM_041468458.1:484..2190"
                     /db_xref="GeneID:121354092"
ORIGIN      
        1 mektsrlqqn misiflfigh livliplfsa egcvicdyfv lvgepiaitc piitlpvlhs
       61 eynltwykng satavtterd arihqregll wfipamleds glyecnirsl nhsnkktinl
      121 tvfkndnglc fngkmkfeqk vtstntgkii cpdleqfkne dnnqpevhwy keckpgfled
      181 krlllaegen avlirnvtvq drgnytcrmv ytymgkqfnv srtislevke kplqmqpefi
      241 yprnntieve lgshvvmecn issginglip fwqvndedvd vfdktyreqf yeeglphgla
      301 vsgtkfnisk vklkdyahkf fchfiygsqq ftayikleyp sqniqgyltg ggvslvflvf
      361 ftlfiykifk idivlwyrds chaflrkkvs dekiydayvl ypknrescly ssdifalkil
      421 pevlerqcgy nlfilgrddl pgeavisvad ekirqsrrvi ivlvpepscy siledesekq
      481 lamhsaliqd gikviliele kiqdyatmpe siryikqkhg virwkgdfse rshsartrfw
      541 kkvryqmpsr ksgslsqlhl lskdlnnk
//
LOCUS       XP_041324393             471 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor type 1-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324393
VERSION     XP_041324393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="interleukin-1 receptor type 1-like isoform X3"
                     /calculated_mol_wt=54233
     Region          30..123
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          46..50
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          63..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          88..92
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          102..107
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          115..118
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..230
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          147..151
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409586"
     Region          166..170
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409586"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409586"
     Region          204..209
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409586"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409586"
     Region          244..346
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          262..266
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          275..280
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          326..332
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..342
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          405..>451
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..471
                     /gene="LOC121354092"
                     /coded_by="XM_041468459.1:484..1899"
                     /db_xref="GeneID:121354092"
ORIGIN      
        1 mektsrlqqn misiflfigh livliplfsa egcvicdyfv lvgepiaitc piitlpvlhs
       61 eynltwykng satavtterd arihqregll wfipamleds glyecnirsl nhsnkktinl
      121 tvfkndnglc fngkmkfeqk vtstntgkii cpdleqfkne dnnqpevhwy keckpgfled
      181 krlllaegen avlirnvtvq drgnytcrmv ytymgkqfnv srtislevkg fiflwlekpl
      241 qmqpefiypr nntievelgs hvvmecniss ginglipfwq vndedvdvfd ktyreqfyee
      301 glphglavsg tkfniskvkl kdyahkffch fiygsqqfta yikleypsqn iqgyltgggv
      361 slvflvfftl fiykifkidi vlwyrdscha flrkkvsdek iydayvlypk nresclyssd
      421 ifalkilpev lerqcgynlf ilgrddlpge ahsmqasqqs ssdlnppnyf c
//
LOCUS       XP_041324395             415 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor type 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324395
VERSION     XP_041324395.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468461.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..415
                     /product="interleukin-1 receptor type 2"
                     /calculated_mol_wt=47171
     Region          50..357
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          164..258
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          176..180
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          194..198
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          218..222
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          232..237
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          249..252
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..415
                     /gene="IL1R2"
                     /coded_by="XM_041468461.1:13..1260"
                     /db_xref="GeneID:121354093"
ORIGIN      
        1 mlmaerlqkh rfqntflpps ssdflwkkmh glffvlvtct vgatafrlqq vkntencpdh
       61 tvyfkhyyel hgepvvlkcp spsykhldfs altpnitwyk ngsntmisgr dedsriwakg
      121 nalwflpvml edsgvyictr rnssycaevs ihltvvekts areiayhqvl ftftsgkivc
      181 pdlwdftpnr tslelkwykd aqpleedner fiilkgsasl imtsvlptda gyytckmsfp
      241 fegvayeitr tiqletveqe kritpiivyp aqkttsaalg skmtlpckvf vglsshfqtd
      301 vewlandtsv dvvykqsrvt egerqeiven genfievpli fdsveevdfy tdftclaqng
      361 ygyqelptrv kqeavglswy iamipvvlac livggicmhk cwksradkgy tipka
//
LOCUS       XP_041324396            1886 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 131 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324396
VERSION     XP_041324396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468462.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1886
                     /product="transmembrane protein 131 isoform X1"
                     /calculated_mol_wt=206542
     Region          101..184
                     /region_name="TMEM131_like_N"
                     /note="Transmembrane protein 131-like N-terminal;
                     pfam12371"
                     /db_xref="CDD:463553"
     Region          335..>1143
                     /region_name="TMEM131_like"
                     /note="Transmembrane protein 131-like; pfam19532"
                     /db_xref="CDD:437364"
     CDS             1..1886
                     /gene="TMEM131"
                     /coded_by="XM_041468462.1:45..5705"
                     /db_xref="GeneID:121354094"
ORIGIN      
        1 mtaapgcprc sprcprcspg scpfpraggw aaawrgaalr falalllhta raekeafiqs
       61 dgiiemlrfd egdllqtett lglssyqqks vslyrgncrp lrfeppmldf heqpvgmpkm
      121 ekvylhnpss eetitlvsis attshfhasf fqnrkilpgg ntsfdvvfla rvvgnventl
      181 fintsnhgvf tyqvfgigvp npyrlrpfig arvpvnssfs piinihnphs eplqvvemys
      241 sggdlhlelp tgqqggtrkl weippyetkg vmrasfssre adnhtafiri ktnasdntev
      301 iilpvevevt tapgiysste mldfgtlrtq dlpkilnlhl lnsgtkdvpi tsvrptpqne
      361 aitvyfkpvt lkaseskytk vasisfdask akrasqssgk itvkakeksy skleipyqae
      421 vldgylgfdh aatlfhirds aadsverliy ltntfsfavl ihdvvlpeea kpmfkvqnfs
      481 kpvlippnes ryiftlhfmp stssvhvdnn illitnaskf hlpvraytgf ldyfvlspkt
      541 eerfidfgil sateatsilf avinsnpiel aikswhiigd glavelltte kgnrttiian
      601 hhelqnatas dqssvilasg yyavfrvnli akelegihdg avqittdyei ltipvkavia
      661 vgsltcspkh iflppsfpgk vvhqslnimn sfsqkvkiqh irslsedvrf yykrlrsnke
      721 dlepgkkski aniyfdpglq cgdhcyvglp fvsksdskvq hsiamqedvw dtdwdlhenl
      781 fkewteiken sshrlnavfe vdtdlqknvr lkitaemswp silssprhln fpltntnsss
      841 eeeiflenpa dapvyvqflp valysspstf vdkllerfnl skpanfnqrt lefqvfrncv
      901 qplqttvglt kglarhsils lilkpgerks vkvkftpaln ktvsslivir nnltvvdaim
      961 vqgqgttesl kvagkppgpg sslrfkitea llkdcsekmk ykepnftlrr tfkventgql
     1021 qinvktmeis gytcegygfk vvncqefals anaskdivil ftpdftasrv irelkfitag
     1081 gsefvfilna slpyhmlatc aealprpnwe lalyiiisgi msvlfllvig tayleaqgiw
     1141 epfrrrlsfe asnppfdmgr pldlrrivgi ssdgnlntlg sdsnhsssrg iygagssssr
     1201 sgagnhkqcn atahlhsnrn tpdveniksk tnssitnrts aqaasmqsvn rtgpftldsg
     1261 ataqthaagk rakgtrqnqq lmqqqapala eqplqqppas gpqqqeqqte salpqlplls
     1321 pphgecassr rhssedsdlt glietmekdf dhpespspdv fteqppspla knkgkgkmiq
     1381 rkakpqkkre ekdrrgkgkq qedelkdsla dddsssttte tsnpdtepll keepekqkgk
     1441 viaekpesei vpvkqktkkv ltsikkevpv dvktsplels ytpplenkqr ktfpskistp
     1501 hllssssksr nlpktrgpss klmenrpsvl akflpsgsaq elgntssseg ekdspppewd
     1561 svplhkagss tdnlyklslq tlnadaflkq rqpsptpasp sppppptsfa fgprggtyss
     1621 ivnsscsset knkqpngtkh klakaaslpg rngnptfaav aagydkspgg sglpkvspsk
     1681 tdvssnisis htvvdsdgsd ssglwspisn psspdftpln sfsafghsfn ltgevfsklg
     1741 larsaygqdv qrnwnefnnv pssiwdpsat dsvpswptss sspthttasi lgnpsglwst
     1801 tpfsssiwss nlnsglpftt ptnalsgidl mgsensaaap pppaaatvan paedmgqtyn
     1861 pwriwsptig rrssdpwsns hyphen
//
LOCUS       XP_041324397            1885 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 131 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324397
VERSION     XP_041324397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468463.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1885
                     /product="transmembrane protein 131 isoform X2"
                     /calculated_mol_wt=206503
     Region          101..184
                     /region_name="TMEM131_like_N"
                     /note="Transmembrane protein 131-like N-terminal;
                     pfam12371"
                     /db_xref="CDD:463553"
     Region          335..>1142
                     /region_name="TMEM131_like"
                     /note="Transmembrane protein 131-like; pfam19532"
                     /db_xref="CDD:437364"
     CDS             1..1885
                     /gene="TMEM131"
                     /coded_by="XM_041468463.1:45..5702"
                     /db_xref="GeneID:121354094"
ORIGIN      
        1 mtaapgcprc sprcprcspg scpfpraggw aaawrgaalr falalllhta raekeafiqs
       61 dgiiemlrfd egdllqtett lglssyqqks vslyrgncrp lrfeppmldf heqpvgmpkm
      121 ekvylhnpss eetitlvsis attshfhasf fqnrkilpgg ntsfdvvfla rvvgnventl
      181 fintsnhgvf tyqvfgigvp npyrlrpfig arvpvnssfs piinihnphs eplqvvemys
      241 sggdlhlelp tgqqggtrkl weippyetkg vmrasfssre adnhtafiri ktnasdntev
      301 iilpvevevt tapgiysste mldfgtlrtq dlpkilnlhl lnsgtkdvpi tsvrptpqne
      361 aitvyfkpvt lkaseskytk vasisfdask akrasqssgk itvkakeksy skleipyqae
      421 vldgylgfdh aatlfhirds aadsverliy ltntfsfavl ihdvvlpeea kpmfkvqnfs
      481 kpvlippnes ryiftlhfmp stssvhvdnn illitnaskf hlpvraytgf ldyfvlspkt
      541 eerfidfgil sateatsilf avinsnpiel aikswhiigd glavelltte kgnrttiian
      601 hhelqnatas dqssvilasg yyavfrvnli akelegihdg avqittdyei ltipvkavia
      661 vgsltcspkh iflppsfpgk vvhqslnimn sfsqkvkiqh irslsedvrf yykrlrsnke
      721 dlepgkkski aniyfdpglq cgdhcyvglp fvskyskvqh siamqedvwd tdwdlhenlf
      781 kewteikens shrlnavfev dtdlqknvrl kitaemswps ilssprhlnf pltntnssse
      841 eeiflenpad apvyvqflpv alysspstfv dkllerfnls kpanfnqrtl efqvfrncvq
      901 plqttvgltk glarhsilsl ilkpgerksv kvkftpalnk tvsslivirn nltvvdaimv
      961 qgqgtteslk vagkppgpgs slrfkiteal lkdcsekmky kepnftlrrt fkventgqlq
     1021 invktmeisg ytcegygfkv vncqefalsa naskdivilf tpdftasrvi relkfitagg
     1081 sefvfilnas lpyhmlatca ealprpnwel alyiiisgim svlfllvigt ayleaqgiwe
     1141 pfrrrlsfea snppfdmgrp ldlrrivgis sdgnlntlgs dsnhsssrgi ygagssssrs
     1201 gagnhkqcna tahlhsnrnt pdvenikskt nssitnrtsa qaasmqsvnr tgpftldsga
     1261 taqthaagkr akgtrqnqql mqqqapalae qplqqppasg pqqqeqqtes alpqlpllsp
     1321 phgecassrr hssedsdltg lietmekdfd hpespspdvf teqppsplak nkgkgkmiqr
     1381 kakpqkkree kdrrgkgkqq edelkdslad ddssstttet snpdtepllk eepekqkgkv
     1441 iaekpeseiv pvkqktkkvl tsikkevpvd vktsplelsy tpplenkqrk tfpskistph
     1501 llssssksrn lpktrgpssk lmenrpsvla kflpsgsaqe lgntsssege kdspppewds
     1561 vplhkagsst dnlyklslqt lnadaflkqr qpsptpasps ppppptsfaf gprggtyssi
     1621 vnsscssetk nkqpngtkhk lakaaslpgr ngnptfaava agydkspggs glpkvspskt
     1681 dvssnisish tvvdsdgsds sglwspisnp sspdftplns fsafghsfnl tgevfsklgl
     1741 arsaygqdvq rnwnefnnvp ssiwdpsatd svpswptsss spthttasil gnpsglwstt
     1801 pfsssiwssn lnsglpfttp tnalsgidlm gsensaaapp ppaaatvanp aedmgqtynp
     1861 wriwsptigr rssdpwsnsh yphen
//
LOCUS       XP_041324398            1776 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 131 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324398
VERSION     XP_041324398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1776
                     /product="transmembrane protein 131 isoform X3"
                     /calculated_mol_wt=194480
     Region          101..184
                     /region_name="TMEM131_like_N"
                     /note="Transmembrane protein 131-like N-terminal;
                     pfam12371"
                     /db_xref="CDD:463553"
     Region          335..>1033
                     /region_name="TMEM131_like"
                     /note="Transmembrane protein 131-like; pfam19532"
                     /db_xref="CDD:437364"
     CDS             1..1776
                     /gene="TMEM131"
                     /coded_by="XM_041468464.1:45..5375"
                     /db_xref="GeneID:121354094"
ORIGIN      
        1 mtaapgcprc sprcprcspg scpfpraggw aaawrgaalr falalllhta raekeafiqs
       61 dgiiemlrfd egdllqtett lglssyqqks vslyrgncrp lrfeppmldf heqpvgmpkm
      121 ekvylhnpss eetitlvsis attshfhasf fqnrkilpgg ntsfdvvfla rvvgnventl
      181 fintsnhgvf tyqvfgigvp npyrlrpfig arvpvnssfs piinihnphs eplqvvemys
      241 sggdlhlelp tgqqggtrkl weippyetkg vmrasfssre adnhtafiri ktnasdntev
      301 iilpvevevt tapgiysste mldfgtlrtq dlpkilnlhl lnsgtkdvpi tsvrptpqne
      361 aitvyfkpvt lkaseskytk vasisfdask akrasqssgk itvkakeksy skleipyqae
      421 vldgylgfdh aatlfhirds aadsverliy ltntfsfavl ihdvvlpeea kpmfkvqnfs
      481 kpvlippnes ryiftlhfmp stssvhvdnn illitnaskf hlpvraytgf ldyfvlspkt
      541 eerfidfgil sateatsilf avinsnpiel aikswhiigd glavelltte kgnrttiian
      601 hhelqnatas dqssvilasg yyavfrvnli akelegihdg avqittdyei ltipvkavia
      661 vgsltcspkh iflppsfpgk vvhqslnimn sfsqkvkiqh irslsedvrf yykrlrsnke
      721 dlepgkkski aniyfdpglq cgdhcyvglp fvsksdskvq hsiamqedvw dtdwdlhenl
      781 fkewteiken sshrlnavfe vdtdlqknvr lkitaemswp silssprhln fpltntnsss
      841 eeeiflenpa dapvyvqflp valysspstf vdkllerfnl skpanfnqrt lefqvfrncv
      901 qplqttvglt kglarhsils lilkpgerks vkvkftpaln ktvsslivir ftpdftasrv
      961 irelkfitag gsefvfilna slpyhmlatc aealprpnwe lalyiiisgi msvlfllvig
     1021 tayleaqgiw epfrrrlsfe asnppfdmgr pldlrrivgi ssdgnlntlg sdsnhsssrg
     1081 iygagssssr sgagnhkqcn atahlhsnrn tpdveniksk tnssitnrts aqaasmqsvn
     1141 rtgpftldsg ataqthaagk rakgtrqnqq lmqqqapala eqplqqppas gpqqqeqqte
     1201 salpqlplls pphgecassr rhssedsdlt glietmekdf dhpespspdv fteqppspla
     1261 knkgkgkmiq rkakpqkkre ekdrrgkgkq qedelkdsla dddsssttte tsnpdtepll
     1321 keepekqkgk viaekpesei vpvkqktkkv ltsikkevpv dvktsplels ytpplenkqr
     1381 ktfpskistp hllssssksr nlpktrgpss klmenrpsvl akflpsgsaq elgntssseg
     1441 ekdspppewd svplhkagss tdnlyklslq tlnadaflkq rqpsptpasp sppppptsfa
     1501 fgprggtyss ivnsscsset knkqpngtkh klakaaslpg rngnptfaav aagydkspgg
     1561 sglpkvspsk tdvssnisis htvvdsdgsd ssglwspisn psspdftpln sfsafghsfn
     1621 ltgevfsklg larsaygqdv qrnwnefnnv pssiwdpsat dsvpswptss sspthttasi
     1681 lgnpsglwst tpfsssiwss nlnsglpftt ptnalsgidl mgsensaaap pppaaatvan
     1741 paedmgqtyn pwriwsptig rrssdpwsns hyphen
//
LOCUS       XP_041324399            1719 aa            linear   VRT 06-MAY-2021
DEFINITION  GRIP and coiled-coil domain-containing protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324399
VERSION     XP_041324399.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468465.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1719
                     /product="GRIP and coiled-coil domain-containing protein 2
                     isoform X1"
                     /calculated_mol_wt=197696
     Region          62..898
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          611..1452
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1583..1647
                     /region_name="Rab_bind"
                     /note="Rab binding domain; pfam16704"
                     /db_xref="CDD:435531"
     Region          1649..1691
                     /region_name="GRIP"
                     /note="GRIP domain; pfam01465"
                     /db_xref="CDD:460221"
     CDS             1..1719
                     /gene="GCC2"
                     /coded_by="XM_041468465.1:15..5174"
                     /db_xref="GeneID:121354095"
ORIGIN      
        1 mteaeaargg csgagsgcga aispplqpag pamevqdagq emvassgppg sgkskldtlp
       61 kedlikfakk qmmliqkaks rcaelekeie elrskaatag addiiqalte rldvvlleka
      121 esqqqcialk kenvqikqea eaavakteel qkqleqsrtd sleeikvlks elanaqckhn
      181 edlkklkmel deqvkkqmel veqvecynds qkevkrlqdd vqrikstyee qilclkkqle
      241 alnedknkev anlqetiksn sqcyqneikn lneevkklkt ahqeevselm hqieissken
      301 eekqnqinql qhnlaeknak demhaqadqr eydleqlrev lhknlenkid vadrqeepci
      361 kakmeekvry lehsleelqs qhsilkeelt ymsnvkikle eeihrmkdey fheredldfk
      421 inelqltked yccvieklkl elqaagqhye taakehklei qtlkeqhqre iselnetlls
      481 gsekeqmalv femqelreql ekvtqekeea vsnynglret metlqaelge sagkisqefe
      541 smkqqqasdv sqlqqklraa fnerdallen vnrlqekvek lssyqletee lkckvislqe
      601 dnsamtssld qkeitvkkle ekitaltdqn rdvlndikcl geeretlqet ckqkqvkiqe
      661 lqqevdcanq hnndlkqkve elterlnkal iskgenaqml eqlekqiesl vrdkeqlsse
      721 vhtlheenkk liqekcelse elgkttsekd scsvlkeqse nlekklqmmt aekdhistll
      781 eneqvhtslv rtqlyhlleq vgfsisdsne ehdslnllki adeclskike eqslaqqkee
      841 evirlqqeve rleeensaqh rehrsliqdf eqeknllree legvlsekea lqrdiqelkn
      901 asektrienq dllanteems qklalyesqi qeqqkgsekq ddlnfileqk etelrnvkde
      961 lsslknlmet mtektdqqss vaelqekigm lekesaekge klnkikvvav kakkeldasr
     1021 kemqtlkeel dlvrsekdql sasmkdviqg aesyknllme ydkqgeqlds ekgrannler
     1081 qvedltrqlq vsseqhdqlr sanedllarv etvqnnakll etqileiqra kakadkelea
     1141 ekflreqktk ehsgalreme elqmqlqkek khlqktmqel elarkdaqks tlmdmeiady
     1201 erlvkelnqk itdkdsried leqetgiqkq kqetlqeeik slqstmqqde ernakikqll
     1261 vktkkelads kqaendhlml qaslkgelea sqqqveayki qvavltsekh kvqeqlrtss
     1321 eqhqrtmsac qqkiaalqee craaqaeqas vtsefesykv rvhnvlkqqk nkstartese
     1381 gakqereqle mvidqlkvkl qdaqhnsqmn aselqalqse hdtllerhnk mlqetvakea
     1441 elreklctiq senmvikteh aqalgqltaq nealrnsfrd qvrnlqeehr ktvetlqqql
     1501 srveaqlfql ksepsirgpa vsnpatkslr errstdlpvl dvhsvareeg egmettdtes
     1561 vssastyvqs leqllnspea kpepsqwqad ltkdeliqkl ntttksadhl nellreseat
     1621 nailmeqikl lkneirrler nqereksvan leylknvllq fiflksgsek erllpvidtm
     1681 lqlspeekgk lvaiaqgeee stsrpsgwas ylhswsglr
//
LOCUS       XP_041324400            1684 aa            linear   VRT 06-MAY-2021
DEFINITION  GRIP and coiled-coil domain-containing protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324400
VERSION     XP_041324400.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468466.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1684
                     /product="GRIP and coiled-coil domain-containing protein 2
                     isoform X2"
                     /calculated_mol_wt=193717
     Region          110..963
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          576..1417
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1548..1612
                     /region_name="Rab_bind"
                     /note="Rab binding domain; pfam16704"
                     /db_xref="CDD:435531"
     Region          1614..1656
                     /region_name="GRIP"
                     /note="GRIP domain; pfam01465"
                     /db_xref="CDD:460221"
     CDS             1..1684
                     /gene="GCC2"
                     /coded_by="XM_041468466.1:15..5069"
                     /db_xref="GeneID:121354095"
ORIGIN      
        1 mteaeaargg csgagsgcga aispplqpag pamevqdagq emvassgppg sgkskldtlp
       61 kedlikfakk qmmliqkaks rcaelekeie elrskaatag addiiqaava kteelqkqle
      121 qsrtdsleei kvlkselana qckhnedlkk lkmeldeqvk kqmelveqve cyndsqkevk
      181 rlqddvqrik styeeqilcl kkqlealned knkevanlqe tiksnsqcyq neiknlneev
      241 kklktahqee vselmhqiei sskeneekqn qinqlqhnla eknakdemha qadqreydle
      301 qlrevlhknl enkidvadrq eepcikakme ekvrylehsl eelqsqhsil keeltymsnv
      361 kikleeeihr mkdeyfhere dldfkinelq ltkedyccvi eklklelqaa gqhyetaake
      421 hkleiqtlke qhqreiseln etllsgseke qmalvfemqe lreqlekvtq ekeeavsnyn
      481 glretmetlq aelgesagki sqefesmkqq qasdvsqlqq klraafnerd allenvnrlq
      541 ekveklssyq leteelkckv islqednsam tssldqkeit vkkleekita ltdqnrdvln
      601 dikclgeere tlqetckqkq vkiqelqqev dcanqhnndl kqkveelter lnkaliskge
      661 naqmleqlek qieslvrdke qlssevhtlh eenkkliqek celseelgkt tsekdscsvl
      721 keqsenlekk lqmmtaekdh istlleneqv htslvrtqly hlleqvgfsi sdsneehdsl
      781 nllkiadecl skikeeqsla qqkeeevirl qqeverleee nsaqhrehrs liqdfeqekn
      841 llreelegvl sekealqrdi qelknasekt rienqdllan teemsqklal yesqiqeqqk
      901 gsekqddlnf ileqketelr nvkdelsslk nlmetmtekt dqqssvaelq ekigmlekes
      961 aekgeklnki kvvavkakke ldasrkemqt lkeeldlvrs ekdqlsasmk dviqgaesyk
     1021 nllmeydkqg eqldsekgra nnlerqvedl trqlqvsseq hdqlrsaned llarvetvqn
     1081 naklletqil eiqrakakad keleaekflr eqktkehsga lremeelqmq lqkekkhlqk
     1141 tmqelelark daqkstlmdm eiadyerlvk elnqkitdkd sriedleqet giqkqkqetl
     1201 qeeikslqst mqqdeernak ikqllvktkk eladskqaen dhlmlqaslk geleasqqqv
     1261 eaykiqvavl tsekhkvqeq lrtsseqhqr tmsacqqkia alqeecraaq aeqasvtsef
     1321 esykvrvhnv lkqqknksta rtesegakqe reqlemvidq lkvklqdaqh nsqmnaselq
     1381 alqsehdtll erhnkmlqet vakeaelrek lctiqsenmv iktehaqalg qltaqnealr
     1441 nsfrdqvrnl qeehrktvet lqqqlsrvea qlfqlkseps irgpavsnpa tkslrerrst
     1501 dlpvldvhsv areegegmet tdtesvssas tyvqsleqll nspeakpeps qwqadltkde
     1561 liqklntttk sadhlnellr eseatnailm eqikllknei rrlernqere ksvanleylk
     1621 nvllqfiflk sgsekerllp vidtmlqlsp eekgklvaia qgeeestsrp sgwasylhsw
     1681 sglr
//
LOCUS       XP_041324401             398 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324401
VERSION     XP_041324401.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468467.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X1"
                     /calculated_mol_wt=45747
     Region          72..130
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(72,75,94,97,100,103,121,124)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(74..75,77,99,101..105,115..116,118,123..124,
                     126..130)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          133..184
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(133,136,153,156,159,162,180,183)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          197..247
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(197,200,217,220,223,226,243,246)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          253..306
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(254,258..261)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(255,258,275,278,281,284,302,305)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          314..367
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(314,317,334,337,340,343,362,365)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..398
                     /gene="LIMS1"
                     /coded_by="XM_041468467.1:243..1439"
                     /db_xref="GeneID:121354096"
ORIGIN      
        1 mdfqhrtqpf pipedeevay kvapdahnsa gnegekpvsk lqrrhseikl ykefcdfyar
       61 fnmanalana icercrggfa paekivnsng elyheqcfvc aqcfqqfpeg lfyefegrky
      121 cehdfqmlfa pcchqcgefi igrvikamnn swhpecfccd icqavladig fvknagrhlc
      181 rpchnkekar glgkyicqkc haiideqpli fkndpyhpdh fncancgkel tadarelkge
      241 lyclpchdkm gvpicgacrr piegrvvnam gkqwhvehfv cakcekpflg hrhyerkgla
      301 ycethynqlf gdvcfhcnrv iegdvvsaln kawcvncfac stcntkltlk dkfveidlkp
      361 vckhcyekmp defkrrlakr erdakdkekq kkkkpicl
//
LOCUS       XP_041324402             387 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324402
VERSION     XP_041324402.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468468.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..387
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X2"
                     /calculated_mol_wt=44344
     Region          72..130
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(72,75,94,97,100,103,121,124)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(74..75,77,99,101..105,115..116,118,123..124,
                     126..130)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          133..184
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(133,136,153,156,159,162,180,183)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          197..247
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(197,200,217,220,223,226,243,246)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          253..306
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(254,258..261)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(255,258,275,278,281,284,302,305)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          314..367
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(314,317,334,337,340,343,362,365)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..387
                     /gene="LIMS1"
                     /coded_by="XM_041468468.1:252..1415"
                     /db_xref="GeneID:121354096"
ORIGIN      
        1 mdfqhrtqpf pipedeevay kvapdahnsa gnegekpvsk lqrrhseikl ykefcdfyar
       61 fnmanalana icercrggfa paekivnsng elyheqcfvc aqcfqqfpeg lfyefegrky
      121 cehdfqmlfa pcchqcgefi igrvikamnn swhpecfccd icqavladig fvknagrhlc
      181 rpchnkekar glgkyicqkc haiideqpli fkndpyhpdh fncancgkel tadarelkge
      241 lyclpchdkm gvpicgacrr piegrvvnam gkqwhvehfv cakcekpflg hrhyerkgla
      301 ycethynqlf gdvcfhcnrv iegdvvsaln kawcvncfac stcntkltlk nkfvefdmkp
      361 vckkcyekfp lelkkrlkkl aetlgrk
//
LOCUS       XP_041324403             372 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324403
VERSION     XP_041324403.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468469.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X3"
                     /calculated_mol_wt=42589
     Region          46..104
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(46,49,68,71,74,77,95,98)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(48..49,51,73,75..79,89..90,92,97..98,100..104)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          107..158
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(107,110,127,130,133,136,154,157)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          171..221
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(171,174,191,194,197,200,217,220)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          227..280
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(228,232..235)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(229,232,249,252,255,258,276,279)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          288..341
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(288,291,308,311,314,317,336,339)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..372
                     /gene="LIMS1"
                     /coded_by="XM_041468469.1:16..1134"
                     /db_xref="GeneID:121354096"
ORIGIN      
        1 mtalqlkels hsglyrrrrd rpdsvlpgsq eenlsnmana lanaicercr ggfapaekiv
       61 nsngelyheq cfvcaqcfqq fpeglfyefe grkycehdfq mlfapcchqc gefiigrvik
      121 amnnswhpec fccdicqavl adigfvknag rhlcrpchnk ekarglgkyi cqkchaiide
      181 qplifkndpy hpdhfncanc gkeltadare lkgelyclpc hdkmgvpicg acrrpiegrv
      241 vnamgkqwhv ehfvcakcek pflghrhyer kglaycethy nqlfgdvcfh cnrviegdvv
      301 salnkawcvn cfacstcntk ltlkdkfvei dlkpvckhcy ekmpdefkrr lakrerdakd
      361 kekqkkkkpi cl
//
LOCUS       XP_041324404             336 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324404
VERSION     XP_041324404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X4"
                     /calculated_mol_wt=38452
     Region          10..68
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(10,13,32,35,38,41,59,62)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(12..13,15,37,39..43,53..54,56,61..62,64..68)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          71..122
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(71,74,91,94,97,100,118,121)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          135..185
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(135,138,155,158,161,164,181,184)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          191..244
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(192,196..199)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(193,196,213,216,219,222,240,243)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          252..305
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(252,255,272,275,278,281,300,303)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..336
                     /gene="LIMS1"
                     /coded_by="XM_041468470.1:235..1245"
                     /db_xref="GeneID:121354096"
ORIGIN      
        1 manalanaic ercrggfapa ekivnsngel yheqcfvcaq cfqqfpeglf yefegrkyce
       61 hdfqmlfapc chqcgefiig rvikamnnsw hpecfccdic qavladigfv knagrhlcrp
      121 chnkekargl gkyicqkcha iideqplifk ndpyhpdhfn cancgkelta darelkgely
      181 clpchdkmgv picgacrrpi egrvvnamgk qwhvehfvca kcekpflghr hyerkglayc
      241 ethynqlfgd vcfhcnrvie gdvvsalnka wcvncfacst cntkltlkdk fveidlkpvc
      301 khcyekmpde fkrrlakrer dakdkekqkk kkpicl
//
LOCUS       XP_041324405             336 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM and senescent cell antigen-like-containing domain protein 1
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324405
VERSION     XP_041324405.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468471.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="LIM and senescent cell antigen-like-containing
                     domain protein 1 isoform X4"
                     /calculated_mol_wt=38452
     Region          10..68
                     /region_name="LIM1_PINCH"
                     /note="The first LIM domain of protein PINCH; cd09331"
                     /db_xref="CDD:188717"
     Site            order(10,13,32,35,38,41,59,62)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188717"
     Site            order(12..13,15,37,39..43,53..54,56,61..62,64..68)
                     /site_type="other"
                     /note="ILK binding interface"
                     /db_xref="CDD:188717"
     Region          71..122
                     /region_name="LIM2_PINCH"
                     /note="The second LIM domain of protein PINCH; cd09332"
                     /db_xref="CDD:188718"
     Site            order(71,74,91,94,97,100,118,121)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188718"
     Region          135..185
                     /region_name="LIM3_PINCH"
                     /note="The third LIM domain of protein PINCH; cd09333"
                     /db_xref="CDD:188719"
     Site            order(135,138,155,158,161,164,181,184)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188719"
     Region          191..244
                     /region_name="LIM4_PINCH"
                     /note="The fourth LIM domain of protein PINCH; cd09334"
                     /db_xref="CDD:188720"
     Site            order(192,196..199)
                     /site_type="other"
                     /note="N(i)ck binding interface"
                     /db_xref="CDD:188720"
     Site            order(193,196,213,216,219,222,240,243)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188720"
     Region          252..305
                     /region_name="LIM5_PINCH"
                     /note="The fifth LIM domain of protein PINCH; cd09335"
                     /db_xref="CDD:188721"
     Site            order(252,255,272,275,278,281,300,303)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188721"
     CDS             1..336
                     /gene="LIMS1"
                     /coded_by="XM_041468471.1:53..1063"
                     /db_xref="GeneID:121354096"
ORIGIN      
        1 manalanaic ercrggfapa ekivnsngel yheqcfvcaq cfqqfpeglf yefegrkyce
       61 hdfqmlfapc chqcgefiig rvikamnnsw hpecfccdic qavladigfv knagrhlcrp
      121 chnkekargl gkyicqkcha iideqplifk ndpyhpdhfn cancgkelta darelkgely
      181 clpchdkmgv picgacrrpi egrvvnamgk qwhvehfvca kcekpflghr hyerkglayc
      241 ethynqlfgd vcfhcnrvie gdvvsalnka wcvncfacst cntkltlkdk fveidlkpvc
      301 khcyekmpde fkrrlakrer dakdkekqkk kkpicl
//
LOCUS       XP_041324406             299 aa            linear   VRT 06-MAY-2021
DEFINITION  regucalcin [Pyrgilauda ruficollis].
ACCESSION   XP_041324406
VERSION     XP_041324406.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468472.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="regucalcin"
                     /calculated_mol_wt=33183
     Region          17..264
                     /region_name="SGL"
                     /note="SMP-30/Gluconolactonase/LRE-like region; pfam08450"
                     /db_xref="CDD:462480"
     Region          154..198
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..299
                     /gene="RGN"
                     /coded_by="XM_041468472.1:680..1579"
                     /db_xref="GeneID:121354098"
ORIGIN      
        1 mssvsiecva kercrigesp vwdekegall yvditgrkvc rwspltrqaq aipvdapvss
       61 valrksgdyv itlgtrfaal kwkeelvtti tqvdkdkant rfndgkvdpa gryfagtmae
      121 eirpavlerr qgslytlfpd lsvvkhfdqv disngldwsl dhrtffyids lsysvdafdy
      181 dlqsgkignr rsiyklekee sipdgmcidt egklwvacyd ggrviridpe tgkrlqtvkl
      241 pvdkttsccf ggkdysemfv tsasdgmdke wlsrqpqagg ifkitglgvk gvppypfag
//
LOCUS       XP_041324408             299 aa            linear   VRT 06-MAY-2021
DEFINITION  regucalcin [Pyrgilauda ruficollis].
ACCESSION   XP_041324408
VERSION     XP_041324408.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468474.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..299
                     /product="regucalcin"
                     /calculated_mol_wt=33183
     Region          17..264
                     /region_name="SGL"
                     /note="SMP-30/Gluconolactonase/LRE-like region; pfam08450"
                     /db_xref="CDD:462480"
     Region          154..198
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          203..239
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..299
                     /gene="RGN"
                     /coded_by="XM_041468474.1:42..941"
                     /db_xref="GeneID:121354098"
ORIGIN      
        1 mssvsiecva kercrigesp vwdekegall yvditgrkvc rwspltrqaq aipvdapvss
       61 valrksgdyv itlgtrfaal kwkeelvtti tqvdkdkant rfndgkvdpa gryfagtmae
      121 eirpavlerr qgslytlfpd lsvvkhfdqv disngldwsl dhrtffyids lsysvdafdy
      181 dlqsgkignr rsiyklekee sipdgmcidt egklwvacyd ggrviridpe tgkrlqtvkl
      241 pvdkttsccf ggkdysemfv tsasdgmdke wlsrqpqagg ifkitglgvk gvppypfag
//
LOCUS       XP_041324409             300 aa            linear   VRT 06-MAY-2021
DEFINITION  regucalcin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324409
VERSION     XP_041324409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="regucalcin-like"
                     /calculated_mol_wt=33374
     Region          18..265
                     /region_name="SGL"
                     /note="SMP-30/Gluconolactonase/LRE-like region; pfam08450"
                     /db_xref="CDD:462480"
     CDS             1..300
                     /gene="LOC121354100"
                     /coded_by="XM_041468475.1:1..903"
                     /db_xref="GeneID:121354100"
ORIGIN      
        1 msssikiesv vkeknrmgec pvweerenal vyvdinsqkv crwspvtnev qsvsvdarvg
       61 svalrqcggy vialgtrfaf ldwdtqaltt ileleqdkpn nrfndgkvdp kgrffagtma
      121 eetapgvrar rqgalytlfp dhsvikqldq ldisngldws ldhrtffhid slsyavhafs
      181 ydvhtgkiac pkllyhleke eqmpdgmcid vegklwvaci dggrviridp etgkriqtvr
      241 lptpritscc fggkdysemy vtsaydglde atlakephag eifkitglgv kgipqnfyaa
//
LOCUS       XP_041324410             763 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/hydrogen exchanger 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324410
VERSION     XP_041324410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="sodium/hydrogen exchanger 2"
                     /calculated_mol_wt=86647
     Region          25..581
                     /region_name="b_cpa1"
                     /note="sodium/hydrogen exchanger 3; TIGR00840"
                     /db_xref="CDD:273294"
     CDS             1..763
                     /gene="SLC9A2"
                     /coded_by="XM_041468476.1:101..2392"
                     /db_xref="GeneID:121354101"
ORIGIN      
        1 mgtgtppsps gtafeetrlh vftldyphvq ipfeitlwil laslakigfh lyhklpsivp
       61 escllilvgl llggiifgae eksppvmnsd vfflyllppi vldagyfmpt rlffenfgti
      121 fwyavvgtlw naigigisly gicqisafgl tditllqnll fgslisavdp vavlavfeni
      181 hvneqlyilv fgesllndai tvvlynlfks fcqmrtikvi difagianff ivgiggvlig
      241 illgfvaaft trfthkirvi eplfvflysy lsyitaemfh lsgimaitac amtmnkyvee
      301 nvsqksytti kyfmkmlssv setlififmg vstvgknhew nwafvsftll fcliwralgv
      361 fvltqiinvf rtipltfkdq fiiaygglrg aicfslvfll ppavfprkkl fitavivvif
      421 ftvfiqgiti rplvefldvk rsnkkqpavs eeiynrffdh vktgiedvcg hwghnfwrdk
      481 fkkfdnkylr rllirenqpk ssivslykkl eikhaiemae sgmiskvpss vslsdyhegk
      541 ikplspteme nmreiltknl yqirhrtmsy nrhslaadas ekqakeilir rrhslreslr
      601 ktnslsrerp aaantkrfls lpkntklpek lrvrnktssr vgdssdseld aattvlnlrp
      661 ragkilrdqr lrqqrplpef rvewknevdg sqdgrgeqqe pstlpqpsig frqplltrpr
      721 fgtlsredlt adhgparpmp pprlvrqasq gdrqrnkpek qly
//
LOCUS       XP_041324411             185 aa            linear   VRT 06-MAY-2021
DEFINITION  CD99 antigen isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324411
VERSION     XP_041324411.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468477.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..185
                     /product="CD99 antigen isoform X1"
                     /calculated_mol_wt=19736
     Region          24..176
                     /region_name="CD99L2"
                     /note="CD99 antigen like protein 2; pfam12301"
                     /db_xref="CDD:463526"
     CDS             1..185
                     /gene="CD99"
                     /coded_by="XM_041468477.1:140..697"
                     /db_xref="GeneID:121354102"
ORIGIN      
        1 mrlwrllllp vllavlvsvr gqdfsledal sdgstkkplv tqktpssddf dlsdafdfgd
       61 pkphppanpr dtdkpkqdqp kdsdkfddsd lwdgslpkgg sdgsgsnerk gptpksgeeg
      121 easqgviagi isavgatvva svgsfiayqk kklcfkqsad eenvnmdshr gaqseppvqr
      181 tllen
//
LOCUS       XP_041324412             184 aa            linear   VRT 06-MAY-2021
DEFINITION  CD99 antigen isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324412
VERSION     XP_041324412.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468478.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="CD99 antigen isoform X2"
                     /calculated_mol_wt=19665
     Region          24..165
                     /region_name="CD99L2"
                     /note="CD99 antigen like protein 2; pfam12301"
                     /db_xref="CDD:463526"
     CDS             1..184
                     /gene="CD99"
                     /coded_by="XM_041468478.1:139..693"
                     /db_xref="GeneID:121354102"
ORIGIN      
        1 mrlwrllllp vllavlvsvr gqdfsledal sdgstkkplv tqktpssddf dlsdafdfgd
       61 pkphppanpr dtdkpkqdqp kdsdkfddsd lwdgslpkgg sdgsgsnerk gptpksgeeg
      121 easqgviagi isavgatvva svgsfiayqk kklcfkqsde envnmdshrg aqseppvqrt
      181 llen
//
LOCUS       XP_041324413             161 aa            linear   VRT 06-MAY-2021
DEFINITION  glycoprotein Xg [Pyrgilauda ruficollis].
ACCESSION   XP_041324413
VERSION     XP_041324413.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468479.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..161
                     /product="glycoprotein Xg"
                     /calculated_mol_wt=17195
     Region          39..158
                     /region_name="CD99L2"
                     /note="CD99 antigen like protein 2; pfam12301"
                     /db_xref="CDD:463526"
     CDS             1..161
                     /gene="XG"
                     /coded_by="XM_041468479.1:1941..2426"
                     /db_xref="GeneID:121354103"
ORIGIN      
        1 mekfrsifil clgfllvlvr gqddfdlada ldhpddiitr kptvirrptr pvfnndlhlg
       61 dafgggdisr kplypplppr pgsygnsggf ddsdlldgkp lppgdeqhhf nhggntdsgl
      121 iagvtspvis afvilvvgsi aaytayknkk lcfkprggaa v
//
LOCUS       XP_041324414             695 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase ZBED1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324414
VERSION     XP_041324414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468480.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..695
                     /product="E3 SUMO-protein ligase ZBED1"
                     /calculated_mol_wt=79632
     Region          23..72
                     /region_name="zf-BED"
                     /note="BED zinc finger; pfam02892"
                     /db_xref="CDD:427043"
     Region          570..650
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..695
                     /gene="ZBED1"
                     /coded_by="XM_041468480.1:181..2268"
                     /db_xref="GeneID:121354104"
ORIGIN      
        1 menkslegsp sdlklvahpr akskvwkyfg fdtnaegcil qwkkiycric maqiaysgnt
       61 snlsyhlekn hpdefcefvk snteqmreaf atafskikpe ssqqvvqdsl imktyqnyen
      121 kkhqeltsav islicegmyp asivdeptfk allrtadpry elpsrkyfct kaipekysai
      181 reivlkelte vlwcgistdm wrsenqnrsy vtvavhflss spanclavns rclktfevpe
      241 dntaetitrv lyetfiewgi ntkvfgattd yskdivkacs lldipvqmpc lghtfnagiq
      301 qafqlpklcn llarcrklve yfqqstvamy mlsekqkqqn ilhcmlvsdr vswwgstlam
      361 lqrlkeqqfv iaavlvedsn nhhlmlesse wntieglvel lqpfkqvaem msaskyptis
      421 mvkpllhmll nttlnikend lkeismakev iakelsttyq htpeidmfln vatfldpryk
      481 klpflsafer qqvenrvvee aksllekvke nsfrteekff tvseeppmkk iiisstpppt
      541 svinnmlaei fcqtggvedq eewhaqivee lsnfksqkvl glnedplkww sdrlalfpvl
      601 pkvlqkywci latrvfperl fgssanvvsa krnrlapahv deqiflyens rngseaeped
      661 edegewgleq eqifnlndsv ninnsffnir dsgfv
//
LOCUS       XP_041324415             695 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase ZBED1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324415
VERSION     XP_041324415.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468481.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..695
                     /product="E3 SUMO-protein ligase ZBED1"
                     /calculated_mol_wt=79632
     Region          23..72
                     /region_name="zf-BED"
                     /note="BED zinc finger; pfam02892"
                     /db_xref="CDD:427043"
     Region          570..650
                     /region_name="Dimer_Tnp_hAT"
                     /note="hAT family C-terminal dimerization region;
                     pfam05699"
                     /db_xref="CDD:399013"
     CDS             1..695
                     /gene="ZBED1"
                     /coded_by="XM_041468481.1:217..2304"
                     /db_xref="GeneID:121354104"
ORIGIN      
        1 menkslegsp sdlklvahpr akskvwkyfg fdtnaegcil qwkkiycric maqiaysgnt
       61 snlsyhlekn hpdefcefvk snteqmreaf atafskikpe ssqqvvqdsl imktyqnyen
      121 kkhqeltsav islicegmyp asivdeptfk allrtadpry elpsrkyfct kaipekysai
      181 reivlkelte vlwcgistdm wrsenqnrsy vtvavhflss spanclavns rclktfevpe
      241 dntaetitrv lyetfiewgi ntkvfgattd yskdivkacs lldipvqmpc lghtfnagiq
      301 qafqlpklcn llarcrklve yfqqstvamy mlsekqkqqn ilhcmlvsdr vswwgstlam
      361 lqrlkeqqfv iaavlvedsn nhhlmlesse wntieglvel lqpfkqvaem msaskyptis
      421 mvkpllhmll nttlnikend lkeismakev iakelsttyq htpeidmfln vatfldpryk
      481 klpflsafer qqvenrvvee aksllekvke nsfrteekff tvseeppmkk iiisstpppt
      541 svinnmlaei fcqtggvedq eewhaqivee lsnfksqkvl glnedplkww sdrlalfpvl
      601 pkvlqkywci latrvfperl fgssanvvsa krnrlapahv deqiflyens rngseaeped
      661 edegewgleq eqifnlndsv ninnsffnir dsgfv
//
LOCUS       XP_041324416             403 aa            linear   VRT 06-MAY-2021
DEFINITION  dehydrogenase/reductase SDR family member on chromosome X
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324416
VERSION     XP_041324416.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468482.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="dehydrogenase/reductase SDR family member on
                     chromosome X"
                     /calculated_mol_wt=43902
     Region          113..386
                     /region_name="retinol-DH_like_SDR_c_like"
                     /note="retinol dehydrogenase (retinol-DH), Light dependent
                     Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and
                     related proteins, classical (c) SDRs; cd05327"
                     /db_xref="CDD:212492"
     Site            order(120,122..125,144..146,171..173,199..201,220,
                     257..259,278,282,310..313,315..316)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:212492"
     Site            order(221,259,278,282)
                     /site_type="active"
                     /db_xref="CDD:212492"
     CDS             1..403
                     /gene="DHRSX"
                     /coded_by="XM_041468482.1:1384..2595"
                     /db_xref="GeneID:121354106"
ORIGIN      
        1 mprragaaas psaavtaaal slpwvgggra appgparpgp aetlrrppar pvpspprpep
       61 aaaagreaam sllsalvpll rvyciglrvi lhqlrrrfqp rcapasvfpt qngkvaivtg
      121 gtkgigyqtv khlarlgmhv iiagnserdg qeavrkikee tltgkvefly cdlasmksir
      181 qfvqqfrarn cplhvlvnna gvmlvperkt edgfeehfgl nylghflltn llldtlkqsg
      241 thshnariit vssathyvgk lhlndlqsrc sysphgayaq sklalvlfty rlqhlltang
      301 shvtanvvdp gvvntelykh vfwvvkvvkw mtawlffksp eegasttiya avspelegag
      361 gcylyneert ksadvaydee lqrrlwtesc kmvgisdeas rlp
//
LOCUS       XP_041324417             318 aa            linear   VRT 06-MAY-2021
DEFINITION  septin-10 [Pyrgilauda ruficollis].
ACCESSION   XP_041324417
VERSION     XP_041324417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="septin-10"
                     /calculated_mol_wt=35849
     Region          41..306
                     /region_name="CDC_Septin"
                     /note="CDC/Septin GTPase family; cd01850"
                     /db_xref="CDD:206649"
     Site            50..57
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206649"
     Site            order(52..58,102,105,185..186,188,240..241)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206649"
     Site            77..85
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206649"
     Site            79
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206649"
     Site            102..105
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206649"
     Site            order(104..141,143..151)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206649"
     Site            185..188
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206649"
     Site            240..242
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206649"
     CDS             1..318
                     /gene="SEPTIN10"
                     /coded_by="XM_041468483.1:1..957"
                     /db_xref="GeneID:121354107"
ORIGIN      
        1 maasdadghl qsvgcrtlsl sahvgfdslp dqlirksikh glcfnilcig etgigksalv
       61 sslfntdfed spsthflssv rlraqtfelq esdvllkltv vktvgfgdqv nkadsyqpiv
      121 dyvdaqfeay leeelkvirs lfsyhdtrih vclyfisptg rslktidllt mrsldskvni
      181 ipvigkadsi sktelqefkk kimselasng iriyqfptdd etvseintit ngylpfavvg
      241 smekvkignk mvrarqypwg ivkvenenhc dtiklrrmlc tnmedlkekt rayyesyrrc
      301 rleklgcrdi gperkpvr
//
LOCUS       XP_041324419             372 aa            linear   VRT 06-MAY-2021
DEFINITION  lipoyltransferase 1, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324419
VERSION     XP_041324419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="lipoyltransferase 1, mitochondrial"
                     /calculated_mol_wt=42315
     Region          30..335
                     /region_name="BPL_LplA_LipB"
                     /note="biotin-lipoate ligase family; cl14057"
                     /db_xref="CDD:449326"
     Site            order(65,98,103..107,111,113,150,160..164,176..178,180)
                     /site_type="active"
                     /db_xref="CDD:319742"
     CDS             1..372
                     /gene="LIPT1"
                     /coded_by="XM_041468485.1:331..1449"
                     /db_xref="GeneID:121354108"
ORIGIN      
        1 mvlqpfkncl wlscvlrtpk acfwsaasgg liiqsvsndv yqnlavedwi hdhmdlekqq
       61 vlflwrnspa vvigrhqnpw qecnlrllrq kniklarrrs gggtvyhdlg ninltffttr
      121 kkyermenlk livkalkalr pqldvhvtdr ydilldrqyk isgtaaklgr tsayhhctll
      181 cnadkcvlss vlkspfegik snatpsvpal vknlfeedps ltsemlldai akeyavqhqi
      241 dhhitlinpa detllpgise ktkelqtwew vygktpkfsi stclnmaykd svldvkvnmd
      301 vkhgrievcn idlpeqwlpp glyselvksl tgskfcpnet ttlvttllrv cpqddelhsr
      361 wsllcenmir lm
//
LOCUS       XP_041324420             248 aa            linear   VRT 06-MAY-2021
DEFINITION  MIT domain-containing protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324420
VERSION     XP_041324420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="MIT domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=28633
     Region          11..85
                     /region_name="MIT_1"
                     /note="MIT: domain contained within Microtubule
                     Interacting and Trafficking molecules. This sub-family of
                     MIT domains is found in proteins with unknown function,
                     co-occuring with an as yet undescribed domain. The
                     molecular function of the MIT domain is unclear; cd02683"
                     /db_xref="CDD:239146"
     Region          99..236
                     /region_name="MIT_C"
                     /note="Phospholipase D-like domain at C-terminus of MIT;
                     pfam16565"
                     /db_xref="CDD:465180"
     CDS             1..248
                     /gene="MITD1"
                     /coded_by="XM_041468486.1:1..747"
                     /db_xref="GeneID:121354109"
ORIGIN      
        1 msragndgia aleragaetm kravqldaas rfqeslvcyq egidlllqvv kattdeakkl
       61 ryrqkiseym traedikehi kkqdgkyhkq irieenatgf gyeklfheyl tesvsevwve
      121 dpyirqvhql ynflrfceml vkgpckvkti hlltsydegs grsqqmtvle eikqslsnyg
      181 vtlsidfsss ihdreirfdn gwiikigrgl dyfkkpqgrf sigycdfdlr pchettvdvf
      241 hakhtkkm
//
LOCUS       XP_041324421             179 aa            linear   VRT 06-MAY-2021
DEFINITION  MIT domain-containing protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324421
VERSION     XP_041324421.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468487.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="MIT domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=20944
     Region          30..167
                     /region_name="MIT_C"
                     /note="Phospholipase D-like domain at C-terminus of MIT;
                     pfam16565"
                     /db_xref="CDD:465180"
     CDS             1..179
                     /gene="MITD1"
                     /coded_by="XM_041468487.1:189..728"
                     /db_xref="GeneID:121354109"
ORIGIN      
        1 mtraedikeh ikkqdgkyhk qirieenatg fgyeklfhey ltesvsevwv edpyirqvhq
       61 lynflrfcem lvkgpckvkt ihlltsydeg sgrsqqmtvl eeikqslsny gvtlsidfss
      121 sihdreirfd ngwiikigrg ldyfkkpqgr fsigycdfdl rpchettvdv fhakhtkkm
//
LOCUS       XP_041324422             205 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L30, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324422
VERSION     XP_041324422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="39S ribosomal protein L30, mitochondrial"
                     /calculated_mol_wt=22431
     Region          111..164
                     /region_name="Ribosomal_L30"
                     /note="Ribosomal protein L30, which is found in eukaryotes
                     and prokaryotes but not in archaea, is one of the smallest
                     ribosomal proteins with a molecular mass of about 7kDa.
                     L30 binds the 23SrRNA as well as the 5S rRNA and is one of
                     five ribosomal proteins that...; cd01658"
                     /db_xref="CDD:100100"
     Site            order(117..118,120..121,123..125,128..129,132..134,136,
                     139,144..145,148..150,152..153)
                     /site_type="other"
                     /note="23S rRNA binding site [nucleotide binding]"
                     /db_xref="CDD:100100"
     CDS             1..205
                     /gene="MRPL30"
                     /coded_by="XM_041468488.1:1..618"
                     /db_xref="GeneID:121354110"
ORIGIN      
        1 matgagraag tgrgnggevs rrcpsarsel kccgtgvrpg rrvhtemaag raglglagtg
       61 kvlgkrmegm aspvwirclf trsnipdsvf qprpgdheky ggnpeephki hvitriksvi
      121 grpywekkii rdlgldkahq prlhknipsv nsrlkvvkhl iriqplklph glpteeevss
      181 tflttrgeli ikkrlkpveq kkika
//
LOCUS       XP_041324423             463 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit alpha-5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324423
VERSION     XP_041324423.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468489.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="gamma-aminobutyric acid receptor subunit
                     alpha-5"
                     /calculated_mol_wt=52114
     Region          51..449
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          58..256
                     /region_name="LGIC_ECD_GABAAR_A5"
                     /note="extracellular domain of gamma-aminobutyric acid
                     receptor subunit alpha-5 (GABAAR-A5 or GABRA5); cd19038"
                     /db_xref="CDD:349839"
     Site            order(71,99)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349839"
     Site            order(83,85..86,91..92,99,101..102,119,121..122,131..136,
                     139,141,143..144,150..152,154,164..166,194,256)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349839"
     Region          173..187
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349839"
     CDS             1..463
                     /gene="GABRA5"
                     /coded_by="XM_041468489.1:426..1817"
                     /db_xref="GeneID:121354111"
ORIGIN      
        1 mdngmvsdfi miknfflfcv smslashfgf sqtptpsvke eandnitift rildglldgy
       61 dnrlrpglge ritqvktdiy vtsfgpvsdt emeytidvff rqswkderlr fkgpmqrlpl
      121 nnllaskiwt pdtffhngkk siahnmttpn kllrleddgt llytmrltis aecpmqledf
      181 pmdahacplk fgsyaypnse viyvwtnstt tsvvvaedgs rlnqyhlmgq tvgtenists
      241 tgeytimtah fhlkrkigyf viqtylpcim tvilsqvsfw lnresvpart vfgvttvltm
      301 ttlsisarns lpkvayatam dwfiavcyaf vfsaliefat vnyftkrswa wdgkkaqeaa
      361 kikkkernll gnkptntyst gkmtpapnmp kdsapavisn tttapvkpae ekpaeskkty
      421 nsiskidkms riifpvlfgt fnlvywatyl nrepvikgan spk
//
LOCUS       XP_041324424             522 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-galactoside alpha-2,6-sialyltransferase 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324424
VERSION     XP_041324424.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468490.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..522
                     /product="beta-galactoside alpha-2,6-sialyltransferase 2"
                     /calculated_mol_wt=60077
     Region          246..515
                     /region_name="GT29_ST6GAL2"
                     /note="beta-galactoside alpha-2,6-sialyltransferase 2;
                     cd23986"
                     /db_xref="CDD:467714"
     Site            order(301..303,324..325,346,436..438,456..457,466..468,
                     484)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467714"
     CDS             1..522
                     /gene="ST6GAL2"
                     /coded_by="XM_041468490.1:1..1569"
                     /db_xref="GeneID:121354112"
ORIGIN      
        1 mkpnlkqwkq lmlfgifawg llflvifiyf tdsntaepvp ssfsyietkr llpiqgkqrv
       61 imgaihdpsf setidgnevl lnedllgafk sgtgnskkwt vleeafrned effppqlgrk
      121 sksafyqvnd dylfaagqpq shnhlqeiek fisadvnnpk gnilqnnwsh qrrmrrrstk
      181 hrrgqmldes ddwdglystm sksflyklwk gdvsskmlnp rlqkamkdyl stnkhgvrfk
      241 gkrnskltgd qlfcelkerv nvktidgkea pfstlgwekh vpqiplvkly thgfgscavv
      301 msagailnss lgdeidshda vlrfnsaptr gyekdvgnkt tmriinsqil tnpnhhfvds
      361 slykdvilva wdpapysanl nvwykkpdyn lftpyvqhrr knptqpfyil hpkfiwqlwd
      421 iiqentkeki qpnppssgfi gilimmsmcn evhvyeyips vrqtdlchyh elyydaactl
      481 gayhpllyek llvqrmnkgl qddlyrkgkv ilpgfkavkc pk
//
LOCUS       XP_041324425             375 aa            linear   VRT 06-MAY-2021
DEFINITION  pinopsin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324425
VERSION     XP_041324425.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468491.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..375
                     /product="pinopsin-like"
                     /calculated_mol_wt=41440
     Region          35..309
                     /region_name="7tmA_tmt_opsin"
                     /note="teleost multiple tissue (tmt) opsin, member of the
                     class A family of seven-transmembrane G protein-coupled
                     receptors; cd15086"
                     /db_xref="CDD:320214"
     Region          36..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320214"
     Region          69..95
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320214"
     Region          107..137
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320214"
     Site            order(110,114..115,118..119,182..185,201..202,206,257,261,
                     284,288)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320214"
     Region          147..169
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320214"
     Region          194..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320214"
     Region          237..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320214"
     Region          277..302
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320214"
     CDS             1..375
                     /gene="LOC121354113"
                     /coded_by="XM_041468491.1:43..1170"
                     /db_xref="GeneID:121354113"
ORIGIN      
        1 mtkskmnhtw mynlsfgapa hpvepragls rsghtvvavf lglilffgfl nnlivlilfc
       61 kfktlrnpvn mlllnisvsd mlvcisgttl sfasnirgkw iggdhacrwy gfvnscfgvv
      121 slislavlsy erystltlch krshdfrkal lavggswiys lfwtvppllg wssygvegag
      181 tscsvrwsse saestsyivc lfifclavpv mvmvycygrl lyavkqvgkv hknaarkrey
      241 hvlfmvittv icylvcwipy gviallatfg kpgavtpvts iipsilakss tvcnpiiyil
      301 mnkqfykcfr qlfhcqpsss tdgeptyhsk vtviqldqrv dggnvcnnep hpetdskmts
      361 llcpettska ippts
//
LOCUS       XP_041324427             357 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324427
VERSION     XP_041324427.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468493.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="P2Y purinoceptor 8"
                     /calculated_mol_wt=41033
     Region          23..303
                     /region_name="7tmA_P2Y8"
                     /note="purinergic receptor P2Y8, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15368"
                     /db_xref="CDD:320490"
     Region          23..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320490"
     Region          57..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320490"
     Site            order(78,81..82,88,95..100,102..103,106,151,153..157,
                     174..176,189,192..194,196..198,200..201,249,252..253,
                     255..256,259,270..271,273..275,278,281..282)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320490"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320490"
     Region          137..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320490"
     Region          189..218
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320490"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320490"
     Region          271..296
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320490"
     CDS             1..357
                     /gene="P2RY8"
                     /coded_by="XM_041468493.1:105..1178"
                     /db_xref="GeneID:121354114"
ORIGIN      
        1 mvkneshlda ltlamlqnkt vsitlpivyt mvalvsipgn lfslwvlcwh ikpktpsvif
       61 minlsitdlm lascfpfqis yhlqsnhwrf getlcslvtv mfysnmyssi ltmtfismer
      121 ymgvvhplkl tkwrrkryal aaciamwfal llafyplett dltyevkelg iitcfdvlkw
      181 dmlptfaawv aflltlfvvl flipfvvtvg cyigiirkli qtsnrygnkq ktrsiylati
      241 vllsfitcfa pnnfillahm isrlfysssl ypaykltlcl scfnncldpf iyyfaskefy
      301 qkfmqllrpk vlvsdslenr reslfsgrtm sarsmssgpm dglegvrvnl qrqesvf
//
LOCUS       XP_041324428             357 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324428
VERSION     XP_041324428.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468494.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="P2Y purinoceptor 8"
                     /calculated_mol_wt=41033
     Region          23..303
                     /region_name="7tmA_P2Y8"
                     /note="purinergic receptor P2Y8, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15368"
                     /db_xref="CDD:320490"
     Region          23..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320490"
     Region          57..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320490"
     Site            order(78,81..82,88,95..100,102..103,106,151,153..157,
                     174..176,189,192..194,196..198,200..201,249,252..253,
                     255..256,259,270..271,273..275,278,281..282)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320490"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320490"
     Region          137..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320490"
     Region          189..218
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320490"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320490"
     Region          271..296
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320490"
     CDS             1..357
                     /gene="P2RY8"
                     /coded_by="XM_041468494.1:115..1188"
                     /db_xref="GeneID:121354114"
ORIGIN      
        1 mvkneshlda ltlamlqnkt vsitlpivyt mvalvsipgn lfslwvlcwh ikpktpsvif
       61 minlsitdlm lascfpfqis yhlqsnhwrf getlcslvtv mfysnmyssi ltmtfismer
      121 ymgvvhplkl tkwrrkryal aaciamwfal llafyplett dltyevkelg iitcfdvlkw
      181 dmlptfaawv aflltlfvvl flipfvvtvg cyigiirkli qtsnrygnkq ktrsiylati
      241 vllsfitcfa pnnfillahm isrlfysssl ypaykltlcl scfnncldpf iyyfaskefy
      301 qkfmqllrpk vlvsdslenr reslfsgrtm sarsmssgpm dglegvrvnl qrqesvf
//
LOCUS       XP_041324429             357 aa            linear   VRT 06-MAY-2021
DEFINITION  P2Y purinoceptor 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324429
VERSION     XP_041324429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468495.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..357
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..357
                     /product="P2Y purinoceptor 8"
                     /calculated_mol_wt=41033
     Region          23..303
                     /region_name="7tmA_P2Y8"
                     /note="purinergic receptor P2Y8, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15368"
                     /db_xref="CDD:320490"
     Region          23..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320490"
     Region          57..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320490"
     Site            order(78,81..82,88,95..100,102..103,106,151,153..157,
                     174..176,189,192..194,196..198,200..201,249,252..253,
                     255..256,259,270..271,273..275,278,281..282)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320490"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320490"
     Region          137..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320490"
     Region          189..218
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320490"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320490"
     Region          271..296
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320490"
     CDS             1..357
                     /gene="P2RY8"
                     /coded_by="XM_041468495.1:133..1206"
                     /db_xref="GeneID:121354114"
ORIGIN      
        1 mvkneshlda ltlamlqnkt vsitlpivyt mvalvsipgn lfslwvlcwh ikpktpsvif
       61 minlsitdlm lascfpfqis yhlqsnhwrf getlcslvtv mfysnmyssi ltmtfismer
      121 ymgvvhplkl tkwrrkryal aaciamwfal llafyplett dltyevkelg iitcfdvlkw
      181 dmlptfaawv aflltlfvvl flipfvvtvg cyigiirkli qtsnrygnkq ktrsiylati
      241 vllsfitcfa pnnfillahm isrlfysssl ypaykltlcl scfnncldpf iyyfaskefy
      301 qkfmqllrpk vlvsdslenr reslfsgrtm sarsmssgpm dglegvrvnl qrqesvf
//
LOCUS       XP_041324430             776 aa            linear   VRT 06-MAY-2021
DEFINITION  LON peptidase N-terminal domain and RING finger protein 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324430
VERSION     XP_041324430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="LON peptidase N-terminal domain and RING finger
                     protein 2 isoform X1"
                     /calculated_mol_wt=85284
     Region          31..92
                     /region_name="TPR_16"
                     /note="Tetratricopeptide repeat; pfam13432"
                     /db_xref="CDD:433202"
     Region          145..>181
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(149,152,164,166,169,172,181)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          216..>316
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          216..244
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(217,220..221,224..225,227,251,254..255,258..259,
                     261..262,285,288..289,292..293,296)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          249..279
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          284..307
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <462..598
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Region          480..524
                     /region_name="RING-HC_LONFs_rpt2"
                     /note="second RING finger, HC subclass, found in the LON
                     peptidase N-terminal domain and RING finger protein
                     family; cd16514"
                     /db_xref="CDD:438177"
     Region          581..767
                     /region_name="LON/PUA"
                     /note="Uncharacterized conserved protein, LON_N-like
                     domain, ASCH/PUA-like superfamily [Function unknown];
                     COG2802"
                     /db_xref="CDD:442054"
     CDS             1..776
                     /gene="LONRF2"
                     /coded_by="XM_041468496.1:337..2667"
                     /db_xref="GeneID:121354115"
ORIGIN      
        1 melgpgpcal ppaagagara aaaggpcaem lqvaeeafrg gnfelaaeiy gselaglpqp
       61 erglclrrad alaragrmae aldaygaaar larlrpeelr elaesvalsi rdkelhlppw
      121 gsgaagggga egeglgdpac crppelfacp lcrrllcepv tlhcghthcr rcaepgdcgr
      181 cxxxxxxxxp paagrprvnv vlgnllhkwf gaesrarrlr aegdalrerq elpaalekyn
      241 qalemapckc sliaqraelc tlmknyqqal hdadilcrnk phwpaghyvk akalsglert
      301 eealkeflyc valnpewssm kkeaqkimce mffpafenvh dsltapfssr tshtrlkpaf
      361 lssintqsav ednsvagssk dtmfrltktp sqesdvfrst dssvthhvld lyfddnkksl
      421 gailsslpgv glkrklssdt rdlqsldvpn kilkkdgdvl penttdtsse ipttlvdasd
      481 fecslcmrlf yepvttpcgh tfclkclerc ldhnplcplc keklseflas rtykktvlte
      541 elivrylpee lserkkvyde emkelsnlnk dvpifvctma fptipcplhv fepryrlmir
      601 rcmetgtkqf gmcladelkg fadhgcilei rdvkffpdgr svvdtvgvrr frvlshgqrd
      661 gyntanieyl edkkvegpey eelvrlhdsv ydqavawfts lkdnmkvqil nhfgsmpgke
      721 pepqsnpsgp awywwllavl plenraqlai lamtslkdrl iairrvlifv trkrpr
//
LOCUS       XP_041324431             744 aa            linear   VRT 06-MAY-2021
DEFINITION  LON peptidase N-terminal domain and RING finger protein 2 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324431
VERSION     XP_041324431.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468497.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..744
                     /product="LON peptidase N-terminal domain and RING finger
                     protein 2 isoform X2"
                     /calculated_mol_wt=81593
     Region          31..92
                     /region_name="TPR_16"
                     /note="Tetratricopeptide repeat; pfam13432"
                     /db_xref="CDD:433202"
     Region          145..>181
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(149,152,164,166,169,172,181)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          216..>316
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          216..244
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(217,220..221,224..225,227,251,254..255,258..259,
                     261..262,285,288..289,292..293,296)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          249..279
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          284..307
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <462..598
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Region          480..524
                     /region_name="RING-HC_LONFs_rpt2"
                     /note="second RING finger, HC subclass, found in the LON
                     peptidase N-terminal domain and RING finger protein
                     family; cd16514"
                     /db_xref="CDD:438177"
     Region          581..735
                     /region_name="LON/PUA"
                     /note="Uncharacterized conserved protein, LON_N-like
                     domain, ASCH/PUA-like superfamily [Function unknown];
                     COG2802"
                     /db_xref="CDD:442054"
     CDS             1..744
                     /gene="LONRF2"
                     /coded_by="XM_041468497.1:337..2571"
                     /db_xref="GeneID:121354115"
ORIGIN      
        1 melgpgpcal ppaagagara aaaggpcaem lqvaeeafrg gnfelaaeiy gselaglpqp
       61 erglclrrad alaragrmae aldaygaaar larlrpeelr elaesvalsi rdkelhlppw
      121 gsgaagggga egeglgdpac crppelfacp lcrrllcepv tlhcghthcr rcaepgdcgr
      181 cxxxxxxxxp paagrprvnv vlgnllhkwf gaesrarrlr aegdalrerq elpaalekyn
      241 qalemapckc sliaqraelc tlmknyqqal hdadilcrnk phwpaghyvk akalsglert
      301 eealkeflyc valnpewssm kkeaqkimce mffpafenvh dsltapfssr tshtrlkpaf
      361 lssintqsav ednsvagssk dtmfrltktp sqesdvfrst dssvthhvld lyfddnkksl
      421 gailsslpgv glkrklssdt rdlqsldvpn kilkkdgdvl penttdtsse ipttlvdasd
      481 fecslcmrlf yepvttpcgh tfclkclerc ldhnplcplc keklseflas rtykktvlte
      541 elivrylpee lserkkvyde emkelsnlnk dvpifvctma fptipcplhv fepryrlmir
      601 rcmetgtkqf gmcladelkg vlshgqrdgy ntanieyled kkvegpeyee lvrlhdsvyd
      661 qavawftslk dnmkvqilnh fgsmpgkepe pqsnpsgpaw ywwllavlpl enraqlaila
      721 mtslkdrlia irrvlifvtr krpr
//
LOCUS       XP_041324432             648 aa            linear   VRT 06-MAY-2021
DEFINITION  LON peptidase N-terminal domain and RING finger protein 2 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324432
VERSION     XP_041324432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="LON peptidase N-terminal domain and RING finger
                     protein 2 isoform X3"
                     /calculated_mol_wt=70481
     Region          31..92
                     /region_name="TPR_16"
                     /note="Tetratricopeptide repeat; pfam13432"
                     /db_xref="CDD:433202"
     Region          145..>181
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(149,152,164,166,169,172,181)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          192..315
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          216..244
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(217,220..221,224..225,227,251,254..255,258..259,
                     261..262,285,288..289,292..293,296)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          249..279
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          284..307
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          <462..598
                     /region_name="COG5222"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227547"
     Region          480..524
                     /region_name="RING-HC_LONFs_rpt2"
                     /note="second RING finger, HC subclass, found in the LON
                     peptidase N-terminal domain and RING finger protein
                     family; cd16514"
                     /db_xref="CDD:438177"
     Region          581..>630
                     /region_name="LON/PUA"
                     /note="Uncharacterized conserved protein, LON_N-like
                     domain, ASCH/PUA-like superfamily [Function unknown];
                     COG2802"
                     /db_xref="CDD:442054"
     CDS             1..648
                     /gene="LONRF2"
                     /coded_by="XM_041468498.1:337..2283"
                     /db_xref="GeneID:121354115"
ORIGIN      
        1 melgpgpcal ppaagagara aaaggpcaem lqvaeeafrg gnfelaaeiy gselaglpqp
       61 erglclrrad alaragrmae aldaygaaar larlrpeelr elaesvalsi rdkelhlppw
      121 gsgaagggga egeglgdpac crppelfacp lcrrllcepv tlhcghthcr rcaepgdcgr
      181 cxxxxxxxxp paagrprvnv vlgnllhkwf gaesrarrlr aegdalrerq elpaalekyn
      241 qalemapckc sliaqraelc tlmknyqqal hdadilcrnk phwpaghyvk akalsglert
      301 eealkeflyc valnpewssm kkeaqkimce mffpafenvh dsltapfssr tshtrlkpaf
      361 lssintqsav ednsvagssk dtmfrltktp sqesdvfrst dssvthhvld lyfddnkksl
      421 gailsslpgv glkrklssdt rdlqsldvpn kilkkdgdvl penttdtsse ipttlvdasd
      481 fecslcmrlf yepvttpcgh tfclkclerc ldhnplcplc keklseflas rtykktvlte
      541 elivrylpee lserkkvyde emkelsnlnk dvpifvctma fptipcplhv fepryrlmir
      601 rcmetgtkqf gmcladelkg atpvvlhgtg gswqcclwkt elswlywl
//
LOCUS       XP_041324433             592 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: arylsulfatase D-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324433
VERSION     XP_041324433.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468499.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..592
                     /product="LOW QUALITY PROTEIN: arylsulfatase D-like"
                     /calculated_mol_wt=66792
     Region          40..564
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(49,89,304,356..357)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(49,89,304,357)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
     CDS             1..592
                     /gene="LOC121354116"
                     /coded_by="XM_041468499.1:69..1847"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121354116"
ORIGIN      
        1 mylfhrmend eiyygkqgry lniwlilclf prtcvsnpyk pnflliladd lgigdvgcyg
       61 ndtirtpnid glakdgvrlt qhiaaaavct psraafltgr ypirsgmass tqrqvlfwng
      121 gsgglppnet tfarilyqqg ystalvgkwh mgvncktrhd hchhplnhgf dyfygmpftl
      181 vnecqgtddp elakslqdty wfytqmivla vftlvigkla nlfpvkwkii iclaicgllh
      241 fiswfssygf tkywncilmr nhditeqpmn lqkttsnmlk eaitfiernk hrpfllfvsl
      301 lhvhtplitt ekfqgrsrhg lygdnveemd wmvgrlldvi dkedlknttf iyfasdhggs
      361 leahrghsql ggwngiykgg kgmggweggi rvpgivrwpg vlpagtvide ptslmdiypt
      421 vvqlaggavp qdrivdghsl lpllqgteqh srheflfhyc gvflhavrwh qkdsgtvwka
      481 hyatpvfqpe asgacfrrgi cpcfgdgvth hdppllfnls qdpseanpls adteplfgnv
      541 vrrmrravee hgktltpvpq qlspynniwk pwlqpccgmf pfcwcheenn ka
//
LOCUS       XP_041324434             456 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit gamma-3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324434
VERSION     XP_041324434.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468500.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="gamma-aminobutyric acid receptor subunit
                     gamma-3"
                     /calculated_mol_wt=52951
     Region          50..453
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          71..252
                     /region_name="LGIC_ECD_GABAAR_G"
                     /note="extracellular domain of gamma-aminobutyric acid
                     receptor subunit gamma; cd19000"
                     /db_xref="CDD:349801"
     Site            order(78,97)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:349801"
     Site            order(81,83..84,89..90,97,99..100,117,119..120,129..134,
                     137,139,141..142,148..150,152,162..164,192,252)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349801"
     Region          171..185
                     /region_name="Cys-loop"
                     /note="Cys-loop [structural motif]"
                     /db_xref="CDD:349801"
     CDS             1..456
                     /gene="GABRG3"
                     /coded_by="XM_041468500.1:1..1371"
                     /db_xref="GeneID:121354117"
ORIGIN      
        1 msakllpvff llsvfhacsr kveedeyedg ttnqkwvlap ktqdtdvtli lnkllreydk
       61 klrpdigikp tvidvdiyvn sigpvssinm eyqidiffaq twtdsrlrfn stmkiltlns
      121 nmvgliwipd tifrnsktae ahwittpnql lriwndgkil ytlrltinae cqlqlhnfpm
      181 dehscplifs sygypkeemi yrwrknsvea adqkswrlyq fdfmglrnts eivktsagdy
      241 vvmtiyfdls rrmgyftiqt yipciltvvl swvsfwikkd atpartalgi ttvltmttls
      301 tiarkslprv syvtamdlfv tvcflfvfaa lmeyatlnyy sscrkpnctk kkkslpdvsf
      361 ghvmnysvld mrppttvitl nnamywqdfe dacvyecldg kdcqsffccy eecksgswrr
      421 grihidilel dsysrvffpt sfllfnlvyw vgylyl
//
LOCUS       XP_041324436             476 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit beta-3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324436
VERSION     XP_041324436.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468502.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="gamma-aminobutyric acid receptor subunit beta-3
                     isoform X1"
                     /calculated_mol_wt=54513
     Region          10..474
                     /region_name="LIC"
                     /note="Cation transporter family protein; TIGR00860"
                     /db_xref="CDD:273305"
     CDS             1..476
                     /gene="GABRB3"
                     /coded_by="XM_041468502.1:73..1503"
                     /db_xref="GeneID:121354118"
ORIGIN      
        1 mwgfgrgrif gifsapvlva vvccaqsvnd pgnmsfvket vdkllkgydi rlrpdfggpp
       61 vcvgmnidia sidmvsevnm dytltmyfqq ywrdkrlaya giplnltldn rvadqlwvpd
      121 tyflndkksf vhgvtvknrm irlhpdgtvl yglritttaa cmmdlrrypl deqnctleie
      181 sygyttddie fywrggdnav tgverielpq fsiveyrlvs knvvfatgay prlslsfrlk
      241 rnigyfilqt ympsilitil swvsfwinyd asaarvalgi ttvltmttin thlretlpki
      301 pyvkaidmyl mgcfvfvfla lleyafvnyi ffgkgpqrqk klaekttkan ndrsrfessr
      361 vdthgnillt sleihnevas nevttsvtea rnstisfdns giqyrkqssh reslgrrpse
      421 rtgshskrgh lrrrssqlki kipdltdvna idrwsrmvfp ftfslfnliy wlyyvn
//
LOCUS       XP_041324437             445 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-aminobutyric acid receptor subunit beta-3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324437
VERSION     XP_041324437.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468503.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="gamma-aminobutyric acid receptor subunit beta-3
                     isoform X2"
                     /calculated_mol_wt=51289
     Region          6..443
                     /region_name="LIC"
                     /note="Cation transporter family protein; TIGR00860"
                     /db_xref="CDD:273305"
     CDS             1..445
                     /gene="GABRB3"
                     /coded_by="XM_041468503.1:53..1390"
                     /db_xref="GeneID:121354118"
ORIGIN      
        1 msfvketvdk llkgydirlr pdfggppvcv gmnidiasid mvsevnmdyt ltmyfqqywr
       61 dkrlayagip lnltldnrva dqlwvpdtyf lndkksfvhg vtvknrmirl hpdgtvlygl
      121 ritttaacmm dlrrypldeq nctleiesyg yttddiefyw rggdnavtgv erielpqfsi
      181 veyrlvsknv vfatgayprl slsfrlkrni gyfilqtymp silitilswv sfwinydasa
      241 arvalgittv ltmttinthl retlpkipyv kaidmylmgc fvfvflalle yafvnyiffg
      301 kgpqrqkkla ekttkanndr srfessrvqv dthgnillts leihnevasn evttsvtear
      361 nstisfdnsg iqyrkqsshr eslgrrpser tgshskrghl rrrssqlkik ipdltdvnai
      421 drwsrmvfpf tfslfnliyw lyyvn
//
LOCUS       XP_041324438             223 aa            linear   VRT 06-MAY-2021
DEFINITION  lysozyme g-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324438
VERSION     XP_041324438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468504.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..223
                     /product="lysozyme g-like isoform X1"
                     /calculated_mol_wt=25132
     Region          53..222
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..223
                     /gene="LOC121354119"
                     /coded_by="XM_041468504.1:1..672"
                     /db_xref="GeneID:121354119"
ORIGIN      
        1 mwiagldslm ldlyalagle qycseilcaq tapfnisaps msyscygdis alqaptisct
       61 parasdcagy amirrtaead lprlrryeip ikrvarnlcl epaligaims qesrvgllld
      121 ngwdrgqqky glmqisrqql epsvpwdsee hinqcsnilv lsinevrarh ptwtwdrqlr
      181 ggictyharm gnlqvyeadp csrdynyvns virraqffkr ngf
//
LOCUS       XP_041324439             200 aa            linear   VRT 06-MAY-2021
DEFINITION  lysozyme g-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324439
VERSION     XP_041324439.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468505.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="lysozyme g-like isoform X2"
                     /calculated_mol_wt=22490
     Region          30..199
                     /region_name="Lyz-like"
                     /note="lysozyme-like domains; cl00222"
                     /db_xref="CDD:469668"
     CDS             1..200
                     /gene="LOC121354119"
                     /coded_by="XM_041468505.1:66..668"
                     /db_xref="GeneID:121354119"
ORIGIN      
        1 mipallllgl salvapsmsy scygdisalq aptisctpar asdcagyami rrtaeadlpr
       61 lrryeipikr varnlclepa ligaimsqes rvgllldngw drgqqkyglm qisrqqleps
      121 vpwdseehin qcsnilvlsi nevrarhptw twdrqlrggi ctyharmgnl qvyeadpcsr
      181 dynyvnsvir raqffkrngf
//
LOCUS       XP_041324440             307 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: sulfotransferase 1C1-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324440
VERSION     XP_041324440.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468506.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..307
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..307
                     /product="LOW QUALITY PROTEIN: sulfotransferase 1C1-like"
                     /calculated_mol_wt=36207
     Region          44..299
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..307
                     /gene="LOC121354120"
                     /coded_by="XM_041468506.1:127..1050"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121354120"
ORIGIN      
        1 mnkmkdlsle ekmirselfe vdgvpltqpi asiwdqvwkf karpddvlia tyakagttwt
       61 qeivdmvqqn gdtekckret tykrhpflew flaeppsary sglelaeamp sprtmkthlp
      121 vqllppsfwe qnckiiyvar nakdnlvsyy hfhrmnkglp dpgtweefve kfvtgkvlwg
      181 swydhvkgww kakdkhrily lfyedmkenp kreiqkiakf lekdlsqevl nkivhntsfe
      241 vmkenpmany tkdfqgimdh sisqfpfmrk gtvadwknhf tvaqnekfde dykkkmsdts
      301 lvfrtei
//
LOCUS       XP_041324441             288 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor ligand superfamily member 13B [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324441
VERSION     XP_041324441.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468507.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="tumor necrosis factor ligand superfamily member
                     13B"
                     /calculated_mol_wt=31451
     Region          148..285
                     /region_name="TNF"
                     /note="Tumor Necrosis Factor; TNF superfamily members
                     include the cytokines: TNF (TNF-alpha), LT
                     (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL),
                     Fas ligand, and osteoprotegerin (OPG) ligand. These
                     proteins generally have an intracellular N-terminal...;
                     cd00184"
                     /db_xref="CDD:238108"
     Site            order(151,197,199,249,254,281,285)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:238108"
     Site            order(172,174,212,219,228)
                     /site_type="active"
                     /note="receptor binding sites [active]"
                     /db_xref="CDD:238108"
     CDS             1..288
                     /gene="TNFSF13B"
                     /coded_by="XM_041468507.1:84..950"
                     /db_xref="GeneID:121354121"
ORIGIN      
        1 mksvdcvhvi qqkdtassps appgavsgat glfpvtflwl amllssclaa vslyhviilk
       61 telealrsel iysiqarspl dqplvspden kagspvssfl qvsaagsrqe srlagagtae
      121 sfqkeiwngs rnrgrrsvvn teekvlqacl qliadsksdi qqkddssivp wllsfkrgta
      181 leeqgnkivi ketgyffiyg qvlytdttfa mghliqrkka hvfgddlslv tlfrciqnmp
      241 qsypnnscyt agiakleegd elqltiprrr akisldgdgt ffgavrlf
//
LOCUS       XP_041324442             361 aa            linear   VRT 06-MAY-2021
DEFINITION  acetylserotonin O-methyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041324442
VERSION     XP_041324442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="acetylserotonin O-methyltransferase"
                     /calculated_mol_wt=40021
     Region          27..115
                     /region_name="dimerization2"
                     /note="dimerization domain; pfam16864"
                     /db_xref="CDD:465287"
     Region          132..341
                     /region_name="Methyltransf_2"
                     /note="O-methyltransferase domain; pfam00891"
                     /db_xref="CDD:395719"
     CDS             1..361
                     /gene="ASMT"
                     /coded_by="XM_041468508.1:190..1275"
                     /db_xref="GeneID:121354122"
ORIGIN      
        1 mkrarksvsq srrkmgsped pdypqiivqy sngfliskvm ftacelgvfd lllesgkpls
       61 sdaiaagvga stmgmkrlld acvglkllav emtqegalyr nteisnvylt ksspksqyhi
      121 mmyysntvyl cwqyladavr egrnqyeraf gvsskdpfga myrsdeemlk fmagqnsvws
      181 icgrdvlaaf dlspftqiyd lgggggalaq ecvslypnst vtiydlpkvv qvakeqfvsp
      241 eerqitfheg dffndaipea elyilskilh dwdddkckql lakvykackp gggvllvesl
      301 lnedksgpve tqlysmnmlv qtegkertaa eysklleaag fgviqvkrtg klydamlgrk
      361 q
//
LOCUS       XP_041324443             291 aa            linear   VRT 06-MAY-2021
DEFINITION  short stature homeobox protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324443
VERSION     XP_041324443.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468509.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="short stature homeobox protein isoform X1"
                     /calculated_mol_wt=32407
     Region          117..173
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     Region          271..287
                     /region_name="OAR"
                     /note="OAR motif; pfam03826"
                     /db_xref="CDD:461067"
     CDS             1..291
                     /gene="SHOX"
                     /coded_by="XM_041468509.1:129..1004"
                     /db_xref="GeneID:121354123"
ORIGIN      
        1 meeltafvsk sfdqkskess sgsgsgnkke tityrevles glarsrelgn sdsnlqdmte
       61 ssnhcpvhlf kdhvesdkdk lkefntgrta egiyeckekr edvksededg qtklkqrrsr
      121 tnftleqlne lerlfdethy pdafmreels qrlglsearv qvwfqnrrak crkqenqmhk
      181 gvilgtashl dacrvapyvn mgalrmpfqq vqaqlqlegv ahahphlhph laahapylmf
      241 ppppfglpia slaesasaaa vvaaaaksns knssiadlrl karkhaealg l
//
LOCUS       XP_041324444             226 aa            linear   VRT 06-MAY-2021
DEFINITION  short stature homeobox protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324444
VERSION     XP_041324444.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468510.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..226
                     /product="short stature homeobox protein isoform X2"
                     /calculated_mol_wt=25884
     Region          117..173
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..226
                     /gene="SHOX"
                     /coded_by="XM_041468510.1:87..767"
                     /db_xref="GeneID:121354123"
ORIGIN      
        1 meeltafvsk sfdqkskess sgsgsgnkke tityrevles glarsrelgn sdsnlqdmte
       61 ssnhcpvhlf kdhvesdkdk lkefntgrta egiyeckekr edvksededg qtklkqrrsr
      121 tnftleqlne lerlfdethy pdafmreels qrlglsearv qvwfqnrrak crkqenqmhk
      181 gvilgtashl dacrvapyvn mgalrmpfqq pkgtlhhllr lgdtws
//
LOCUS       XP_041324445             323 aa            linear   VRT 06-MAY-2021
DEFINITION  magnesium transporter NIPA1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324445
VERSION     XP_041324445.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468511.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="magnesium transporter NIPA1 isoform X1"
                     /calculated_mol_wt=34165
     Region          25..307
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..323
                     /gene="NIPA1"
                     /coded_by="XM_041468511.1:58..1029"
                     /db_xref="GeneID:121354125"
ORIGIN      
        1 mrmavgaaag egaaqspgpa avslglsvav vsslvngstf vlqkkgivra rgrgtsyltd
       61 ivwwsgtiam algqignfla ytavptvlvt plgalgvpfg silasyllke klnilgklgc
      121 llscagsvvl iihspksesv ttqaeleekl tnpvfvgylc ivllmlllli fwiapahgpt
      181 nimvyisics llgsftvpst kgiglaaqdi fhnnpssqra lylclvllav lgcsiiiqfr
      241 yinkalecfd ssvfgaiyyv vfttlvllas ailfrewsnv gvvdflgmac gfttvsigiv
      301 liqvfkefnf nigdlnkpnm ktd
//
LOCUS       XP_041324446             266 aa            linear   VRT 06-MAY-2021
DEFINITION  magnesium transporter NIPA1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324446
VERSION     XP_041324446.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468512.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="magnesium transporter NIPA1 isoform X2"
                     /calculated_mol_wt=28625
     Region          14..250
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..266
                     /gene="NIPA1"
                     /coded_by="XM_041468512.1:132..932"
                     /db_xref="GeneID:121354125"
ORIGIN      
        1 mspvvplvlw qqvalgqign flaytavptv lvtplgalgv pfgsilasyl lkeklnilgk
       61 lgcllscags vvliihspks esvttqaele ekltnpvfvg ylcivllmll llifwiapah
      121 gptnimvyis icsllgsftv pstkgiglaa qdifhnnpss qralylclvl lavlgcsiii
      181 qfryinkale cfdssvfgai yyvvfttlvl lasailfrew snvgvvdflg macgfttvsi
      241 givliqvfke fnfnigdlnk pnmktd
//
LOCUS       XP_041324449             570 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor-like 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324449
VERSION     XP_041324449.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468515.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..570
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..570
                     /product="interleukin-1 receptor-like 1 isoform X1"
                     /calculated_mol_wt=65386
     Region          36..350
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          147..232
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          160..164
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          175..179
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..199
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          209..214
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          226..229
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          410..557
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..570
                     /gene="IL1RL1"
                     /coded_by="XM_041468515.1:54..1766"
                     /db_xref="GeneID:121354126"
ORIGIN      
        1 mepvaaahsy mtteptalss avknciqgvf mfrnmmglid lillstflsv smasetfdsm
       61 egealvvkcp kssssvkitw yrtdthkvip aeeegsrvfs ierflwflpt srddsgnytc
      121 vthfssnrtk synvsvqvhs ykpgecfpsq irypndtgkg kvvcptidny knativqwyk
      181 dckplqgqry fkeekyiyid nprreddgyy tcqfiythkg nvfnvsatri fisgvkyspl
      241 ppqiifpknn dvveaelgaa lslkcqarlg ikkqplaavr wdvdntpvkn lvfsrfheet
      301 hffdghgqvy yeestlnite vkkedlqsnf tcialnimyn tgvtvtlqlk vqskdflpnv
      361 llitgslvll gaialsvily qsfradivll yreifqpysv kddgkiyday viypknhtse
      421 anfveyfvyq impdilenkc gytlciygrd iypgedaana iekrmqksrr liilltyqli
      481 nskedaydqh ialynaliqn dtkvilleme tignyeklqe slrfiikqqg tikwkeehtv
      541 hpqspsskfw kqvryrmplr rapshqadtr
//
LOCUS       XP_041324450             522 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-1 receptor-like 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324450
VERSION     XP_041324450.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468516.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..522
                     /product="interleukin-1 receptor-like 1 isoform X2"
                     /calculated_mol_wt=60006
     Region          36..350
                     /region_name="PHA02785"
                     /note="IL-beta-binding protein; Provisional"
                     /db_xref="CDD:165149"
     Region          147..232
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          160..164
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          175..179
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..199
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          209..214
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          226..229
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          362..509
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..522
                     /gene="IL1RL1"
                     /coded_by="XM_041468516.1:54..1622"
                     /db_xref="GeneID:121354126"
ORIGIN      
        1 mepvaaahsy mtteptalss avknciqgvf mfrnmmglid lillstflsv smasetfdsm
       61 egealvvkcp kssssvkitw yrtdthkvip aeeegsrvfs ierflwflpt srddsgnytc
      121 vthfssnrtk synvsvqvhs ykpgecfpsq irypndtgkg kvvcptidny knativqwyk
      181 dckplqgqry fkeekyiyid nprreddgyy tcqfiythkg nvfnvsatri fisgvkyspl
      241 ppqiifpknn dvveaelgaa lslkcqarlg ikkqplaavr wdvdntpvkn lvfsrfheet
      301 hffdghgqvy yeestlnite vkkedlqsnf tcialnimyn tgvtvtlqlk vqskdgkiyd
      361 ayviypknht seanfveyfv yqimpdilen kcgytlciyg rdiypgedaa naiekrmqks
      421 rrliilltyq linskedayd qhialynali qndtkville metignyekl qeslrfiikq
      481 qgtikwkeeh tvhpqspssk fwkqvryrmp lrrapshqad tr
//
LOCUS       XP_041324451             945 aa            linear   VRT 06-MAY-2021
DEFINITION  chromosome alignment-maintaining phosphoprotein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324451
VERSION     XP_041324451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..945
                     /product="chromosome alignment-maintaining phosphoprotein
                     1"
                     /calculated_mol_wt=104907
     Region          <126..341
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          <177..564
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <756..>839
                     /region_name="PTZ00440"
                     /note="reticulocyte binding protein 2-like protein;
                     Provisional"
                     /db_xref="CDD:240419"
     Region          846..866
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          875..895
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          902..921
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..945
                     /gene="CHAMP1"
                     /coded_by="XM_041468517.1:431..3268"
                     /db_xref="GeneID:121354127"
ORIGIN      
        1 mdmlqilrkt terlecdycs frgtdyeniq ihmgtvhpey cdemdaaglg klifyqksak
       61 lfhchkcfft skmycnvyyh ikaqhaapek wneekkeqqa egdsdsskks vtlepqkpal
      121 spesrkpals pelpksepvv spklqkssvs pepqksaqvt spepeksaqt vspdpeksaq
      181 atspdpeklt ssvspdsqkp spavspdpqk pspvvspdpq kpspavspdp qkpapavspe
      241 prrhspatsp eprrhspais peprrhspav speprryspa vspepkkppp avspeprrya
      301 pagspeprrh psqmrrpasa sspesrrpas avspeswrpg ptvspepwrs sphevqksst
      361 vspwaskpam svsvesrrsa pesrrpgsvv lpeprrlvsd sckstsfses qkstlvssep
      421 wkpissvype gwkpvlspdt wkhsppvspe lrksshtvss dswkpsffpe vrkpgvsvsp
      481 eswklsesrk smyfsetqks tsaasseiqk rahfpeprkr vlfpetrkcn pttstdvqkr
      541 avfsepqnqt stsavspegq kqalcseaqk salvssevqk halfseaqkl tsissevqes
      601 tsflesqkst spevqkhglf tesqkpppvs perlkqavft dcqksavspd vqkhavfsem
      661 qkpaaalssd vqrhaettvp semqknilfs ephksasgff sepqtpsesg esdflshsld
      721 dqkplddlfs qdeqsilake spehmlyscp kkkpkkenqe nsdselnsse cgkpvvdsme
      781 mkeqesnsdq eqydmessdy skeskmdatt ptqpqcvlqf teekeafise eeiakymkrg
      841 kgkyyckicc cramkkgavl hhlvnkhnvq spykckicgk afllesllkn hvaahgqsll
      901 kcprcnfesn fprgfkkhlt hcqsrhsddt pkkhldslep leeqi
//
LOCUS       XP_041324452             945 aa            linear   VRT 06-MAY-2021
DEFINITION  chromosome alignment-maintaining phosphoprotein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324452
VERSION     XP_041324452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..945
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..945
                     /product="chromosome alignment-maintaining phosphoprotein
                     1"
                     /calculated_mol_wt=104907
     Region          <126..341
                     /region_name="PspC_subgroup_2"
                     /note="pneumococcal surface protein PspC, LPXTG-anchored
                     form; NF033839"
                     /db_xref="CDD:468202"
     Region          <177..564
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <756..>839
                     /region_name="PTZ00440"
                     /note="reticulocyte binding protein 2-like protein;
                     Provisional"
                     /db_xref="CDD:240419"
     Region          846..866
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          875..895
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          902..921
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..945
                     /gene="CHAMP1"
                     /coded_by="XM_041468518.1:113..2950"
                     /db_xref="GeneID:121354127"
ORIGIN      
        1 mdmlqilrkt terlecdycs frgtdyeniq ihmgtvhpey cdemdaaglg klifyqksak
       61 lfhchkcfft skmycnvyyh ikaqhaapek wneekkeqqa egdsdsskks vtlepqkpal
      121 spesrkpals pelpksepvv spklqkssvs pepqksaqvt spepeksaqt vspdpeksaq
      181 atspdpeklt ssvspdsqkp spavspdpqk pspvvspdpq kpspavspdp qkpapavspe
      241 prrhspatsp eprrhspais peprrhspav speprryspa vspepkkppp avspeprrya
      301 pagspeprrh psqmrrpasa sspesrrpas avspeswrpg ptvspepwrs sphevqksst
      361 vspwaskpam svsvesrrsa pesrrpgsvv lpeprrlvsd sckstsfses qkstlvssep
      421 wkpissvype gwkpvlspdt wkhsppvspe lrksshtvss dswkpsffpe vrkpgvsvsp
      481 eswklsesrk smyfsetqks tsaasseiqk rahfpeprkr vlfpetrkcn pttstdvqkr
      541 avfsepqnqt stsavspegq kqalcseaqk salvssevqk halfseaqkl tsissevqes
      601 tsflesqkst spevqkhglf tesqkpppvs perlkqavft dcqksavspd vqkhavfsem
      661 qkpaaalssd vqrhaettvp semqknilfs ephksasgff sepqtpsesg esdflshsld
      721 dqkplddlfs qdeqsilake spehmlyscp kkkpkkenqe nsdselnsse cgkpvvdsme
      781 mkeqesnsdq eqydmessdy skeskmdatt ptqpqcvlqf teekeafise eeiakymkrg
      841 kgkyyckicc cramkkgavl hhlvnkhnvq spykckicgk afllesllkn hvaahgqsll
      901 kcprcnfesn fprgfkkhlt hcqsrhsddt pkkhldslep leeqi
//
LOCUS       XP_041324453             152 aa            linear   VRT 06-MAY-2021
DEFINITION  augurin [Pyrgilauda ruficollis].
ACCESSION   XP_041324453
VERSION     XP_041324453.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468519.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..152
                     /product="augurin"
                     /calculated_mol_wt=17456
     Region          36..152
                     /region_name="Augurin"
                     /note="Oesophageal cancer-related gene 4; pfam15187"
                     /db_xref="CDD:464552"
     CDS             1..152
                     /gene="ECRG4"
                     /coded_by="XM_041468519.1:16..474"
                     /db_xref="GeneID:121354128"
ORIGIN      
        1 mpppcprgal pgaslllllf lllpllcaap dvsrgnklkl mlqkreapaa akpevsvket
       61 aakeflsslr rqrrqlwdrs qpdvqqwyqq flylgfdeqk feddisywtn lgrarneyyg
      121 gyyqhhyded spigprnpht frhgagvnyd dy
//
LOCUS       XP_041324454             421 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-glucuronic acid decarboxylase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324454
VERSION     XP_041324454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..421
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X1"
                     /calculated_mol_wt=47598
     Region          5..79
                     /region_name="UXS1_N"
                     /note="UDP-glucuronate decarboxylase N-terminal;
                     pfam11803"
                     /db_xref="CDD:463356"
     Region          90..393
                     /region_name="UGD_SDR_e"
                     /note="UDP-glucuronate decarboxylase (UGD) and related
                     proteins, extended (e) SDRs; cd05230"
                     /db_xref="CDD:187541"
     Site            order(96,98..101,120..125,144..146,160..164,179,201..203,
                     232,236,259..262,273)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187541"
     Site            order(149..150,185..186,189..190,192..193,246)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(166,229,261,272..274,277..278,289..291,296,298,332,
                     358,362)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(180,203,232,236)
                     /site_type="active"
                     /db_xref="CDD:187541"
     CDS             1..421
                     /gene="UXS1"
                     /coded_by="XM_041468520.1:84..1349"
                     /db_xref="GeneID:121354129"
ORIGIN      
        1 mvskgpllrl ltainrrrmk llmglafvay vasvwgnfvn mrslqengdq kvesrieeav
       61 aplrekikdl eksftqkypp vkflsekdrk rilitggagf vgshltdklm mdghevtvvd
      121 nfftgrkrnv ehwighenfe linhdvvepl yievdqiyhl aspasppnym ynpiktlktn
      181 tigtlnmlgl akrvgarlll astsevygdp evhpqnedyw ghvnpigpra cydegkrvae
      241 tmcyaymkqe gvevrvarif ntfgprmhmn dgrvvsnfil qalqgepltv ygpgtqtraf
      301 qyvsdlvngl valmnsnvss pvnlgnpeeh tilefaqlik klvgsgseiq flseaqddpq
      361 krkpdirkak lllgwepvvp leeglnkaih yfrkeleyqa nnqyipkpkp armkkgrtrh
      421 n
//
LOCUS       XP_041324455             371 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-glucuronic acid decarboxylase 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324455
VERSION     XP_041324455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X2"
                     /calculated_mol_wt=41931
     Region          <8..29
                     /region_name="UXS1_N"
                     /note="UDP-glucuronate decarboxylase N-terminal;
                     pfam11803"
                     /db_xref="CDD:463356"
     Region          40..343
                     /region_name="UGD_SDR_e"
                     /note="UDP-glucuronate decarboxylase (UGD) and related
                     proteins, extended (e) SDRs; cd05230"
                     /db_xref="CDD:187541"
     Site            order(46,48..51,70..75,94..96,110..114,129,151..153,182,
                     186,209..212,223)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187541"
     Site            order(99..100,135..136,139..140,142..143,196)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(116,179,211,222..224,227..228,239..241,246,248,282,
                     308,312)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(130,153,182,186)
                     /site_type="active"
                     /db_xref="CDD:187541"
     CDS             1..371
                     /gene="UXS1"
                     /coded_by="XM_041468521.1:138..1253"
                     /db_xref="GeneID:121354129"
ORIGIN      
        1 mgklcqyeav aplrekikdl eksftqkypp vkflsekdrk rilitggagf vgshltdklm
       61 mdghevtvvd nfftgrkrnv ehwighenfe linhdvvepl yievdqiyhl aspasppnym
      121 ynpiktlktn tigtlnmlgl akrvgarlll astsevygdp evhpqnedyw ghvnpigpra
      181 cydegkrvae tmcyaymkqe gvevrvarif ntfgprmhmn dgrvvsnfil qalqgepltv
      241 ygpgtqtraf qyvsdlvngl valmnsnvss pvnlgnpeeh tilefaqlik klvgsgseiq
      301 flseaqddpq krkpdirkak lllgwepvvp leeglnkaih yfrkeleyqa nnqyipkpkp
      361 armkkgrtrh n
//
LOCUS       XP_041324456             312 aa            linear   VRT 06-MAY-2021
DEFINITION  UDP-glucuronic acid decarboxylase 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324456
VERSION     XP_041324456.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468522.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="UDP-glucuronic acid decarboxylase 1 isoform X3"
                     /calculated_mol_wt=35268
     Region          1..284
                     /region_name="UGD_SDR_e"
                     /note="UDP-glucuronate decarboxylase (UGD) and related
                     proteins, extended (e) SDRs; cd05230"
                     /db_xref="CDD:187541"
     Site            order(11..16,35..37,51..55,70,92..94,123,127,150..153,164)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:187541"
     Site            order(40..41,76..77,80..81,83..84,137)
                     /site_type="other"
                     /note="putative substrate binding site 2 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(57,120,152,163..165,168..169,180..182,187,189,223,
                     249,253)
                     /site_type="other"
                     /note="putative substrate binding site 1 [chemical
                     binding]"
                     /db_xref="CDD:187541"
     Site            order(71,94,123,127)
                     /site_type="active"
                     /db_xref="CDD:187541"
     CDS             1..312
                     /gene="UXS1"
                     /coded_by="XM_041468522.1:129..1067"
                     /db_xref="GeneID:121354129"
ORIGIN      
        1 mmdghevtvv dnfftgrkrn vehwighenf elinhdvvep lyievdqiyh laspasppny
       61 mynpiktlkt ntigtlnmlg lakrvgarll lastsevygd pevhpqnedy wghvnpigpr
      121 acydegkrva etmcyaymkq egvevrvari fntfgprmhm ndgrvvsnfi lqalqgeplt
      181 vygpgtqtra fqyvsdlvng lvalmnsnvs spvnlgnpee htilefaqli kklvgsgsei
      241 qflseaqddp qkrkpdirka klllgwepvv pleeglnkai hyfrkeleyq annqyipkpk
      301 parmkkgrtr hn
//
LOCUS       XP_041324457             380 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic protein NCK2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324457
VERSION     XP_041324457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="cytoplasmic protein NCK2"
                     /calculated_mol_wt=42872
     Region          2..59
                     /region_name="SH3_Nck2_1"
                     /note="First Src Homology 3 domain of Nck2 adaptor
                     protein; cd11899"
                     /db_xref="CDD:212832"
     Site            order(13,16..17,19..20,36..38,50,52..55)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212832"
     Region          114..168
                     /region_name="SH3_Nck2_2"
                     /note="Second Src Homology 3 domain of Nck2 adaptor
                     protein; cd11902"
                     /db_xref="CDD:212835"
     Site            order(120,122,125,129,147..148,161,163..164)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212835"
     Region          198..256
                     /region_name="SH3_Nck2_3"
                     /note="Third Src Homology 3 domain of Nck2 adaptor
                     protein; cd11903"
                     /db_xref="CDD:212836"
     Site            order(204,206,209,213,233..234,248,250..251)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212836"
     Site            order(235,249..250,252..254)
                     /site_type="other"
                     /note="Lim4 domain interface [polypeptide binding]"
                     /db_xref="CDD:212836"
     Region          283..380
                     /region_name="SH2_Nck2"
                     /note="Src homology 2 (SH2) domain found in Nck; cd10409"
                     /db_xref="CDD:198272"
     Site            order(292,311,313..315,321,334)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198272"
     Site            order(333,344,347,364..366)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198272"
     CDS             1..380
                     /gene="NCK2"
                     /coded_by="XM_041468523.1:411..1553"
                     /db_xref="GeneID:121354130"
ORIGIN      
        1 mteeviviak wdytaqqdqe ldikknerlw llddsktwwr vrnaanktgy vpsnyverkn
       61 slkkgslvkn lkdtlglgkt krktsardas ptpstdaeyp sngssadriy dlnipayvkf
      121 ayvaeredel slvkgsrviv mekcsdgwwr gsyngqigwf psnyvveeve eatadspsfl
      181 slrkgasmsn gqgtkvlhiv qtlypfssvt deelnfekge tmeviekpen dpewwkckns
      241 rgqiglvpkn yvviisdgps mntshppqis ytgpsstgrf agrewyygnv trhqaecaln
      301 ergvegdflv rdsesspsdf svslkasgkn khfkvqlvdn vycigqrrfn tmdelvehyk
      361 kapiftsehg eklylvkalq
//
LOCUS       XP_041324458             380 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic protein NCK2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324458
VERSION     XP_041324458.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468524.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="cytoplasmic protein NCK2"
                     /calculated_mol_wt=42872
     Region          2..59
                     /region_name="SH3_Nck2_1"
                     /note="First Src Homology 3 domain of Nck2 adaptor
                     protein; cd11899"
                     /db_xref="CDD:212832"
     Site            order(13,16..17,19..20,36..38,50,52..55)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212832"
     Region          114..168
                     /region_name="SH3_Nck2_2"
                     /note="Second Src Homology 3 domain of Nck2 adaptor
                     protein; cd11902"
                     /db_xref="CDD:212835"
     Site            order(120,122,125,129,147..148,161,163..164)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212835"
     Region          198..256
                     /region_name="SH3_Nck2_3"
                     /note="Third Src Homology 3 domain of Nck2 adaptor
                     protein; cd11903"
                     /db_xref="CDD:212836"
     Site            order(204,206,209,213,233..234,248,250..251)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212836"
     Site            order(235,249..250,252..254)
                     /site_type="other"
                     /note="Lim4 domain interface [polypeptide binding]"
                     /db_xref="CDD:212836"
     Region          283..380
                     /region_name="SH2_Nck2"
                     /note="Src homology 2 (SH2) domain found in Nck; cd10409"
                     /db_xref="CDD:198272"
     Site            order(292,311,313..315,321,334)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198272"
     Site            order(333,344,347,364..366)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198272"
     CDS             1..380
                     /gene="NCK2"
                     /coded_by="XM_041468524.1:339..1481"
                     /db_xref="GeneID:121354130"
ORIGIN      
        1 mteeviviak wdytaqqdqe ldikknerlw llddsktwwr vrnaanktgy vpsnyverkn
       61 slkkgslvkn lkdtlglgkt krktsardas ptpstdaeyp sngssadriy dlnipayvkf
      121 ayvaeredel slvkgsrviv mekcsdgwwr gsyngqigwf psnyvveeve eatadspsfl
      181 slrkgasmsn gqgtkvlhiv qtlypfssvt deelnfekge tmeviekpen dpewwkckns
      241 rgqiglvpkn yvviisdgps mntshppqis ytgpsstgrf agrewyygnv trhqaecaln
      301 ergvegdflv rdsesspsdf svslkasgkn khfkvqlvdn vycigqrrfn tmdelvehyk
      361 kapiftsehg eklylvkalq
//
LOCUS       XP_041324459             851 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: P protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324459
VERSION     XP_041324459.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468525.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..851
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..851
                     /product="LOW QUALITY PROTEIN: P protein"
                     /calculated_mol_wt=95382
     Region          350..841
                     /region_name="P_permease"
                     /note="Permease P (pink-eyed dilution). Mutations in the
                     human melanosomal P gene were responsible for classic
                     phenotype of oculocutaneous albinism type 2 (OCA2).
                     Although the precise function of the P protein is unknown,
                     it was predicted to regulate the...; cd01116"
                     /db_xref="CDD:238536"
     Site            order(354..357,364..377,397..414,437..453,455..472,
                     477..500,527..541,635..647,663..677,689..707,736..751,
                     781..800,826..838)
                     /site_type="other"
                     /note="transmembrane helices"
                     /db_xref="CDD:238536"
     CDS             1..851
                     /gene="OCA2"
                     /coded_by="XM_041468525.1:16..2571"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121354132"
ORIGIN      
        1 myldnkdxtv srqqemelnq tsshqtilsa kvaakpvtrs cnelqlfkey hgmvaslges
       61 qtlceksaig edgcialekd ftpvpmqgry hfnfsklfss rskntvftek tpllkvssee
      121 dglqcmalhn pdfttdddsw dnssaefeqr fqlesemtsf prsassekye ildnlhvkfn
      181 lskmrcclkf lkvsglfifv vvcsilfgiy pdqgmpwqml avsplesfsm nltdfrdsal
      241 lkldiggpfe aqvvdeqtee yimvqisqse dtgsrrrhqq qvvynwslpl ssrrnqqiit
      301 trtfqipnrg tisiniqafl qesgsvplsm khqylhanig aqvtvasiil vgvyvliile
      361 ivhrtlaaml galaalaala ivgerpsmvk vvewidyetl allfgmmvlv aifsetgffd
      421 ycavkayrfs rgkvwamitl lcliaailsa fldnvttmll ftpvtirlce vlnldprhvl
      481 iaeviftnig gaatavgdpp nviivskqel rkrgldfaaf tghmflgicl vvlvsfpflr
      541 llywnkklyn kepseivelk heiyvwrlta qrinpasree tavkcllmqk vltlemllrk
      601 klrtfhrqis qedknwetni qelqkkhrit dkillikclt vlgcvilmff lnsfvpgiyl
      661 dlgwiamlga lwllvladih dfemilnrve watllffaal fvlmealahl hlidyigeqt
      721 allikvvped qrlavaiilv lwvsalassv idnipftatm ipvllnlskd pdvnlpmkpl
      781 ifslamgacl ggngtligas anvvcagiae qhgygfsfme ffrlgfpmmi vsctigmcyl
      841 lvahvvvgwn s
//
LOCUS       XP_041324460             337 aa            linear   VRT 06-MAY-2021
DEFINITION  PI-PLC X domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324460
VERSION     XP_041324460.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468526.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="PI-PLC X domain-containing protein 1"
                     /calculated_mol_wt=39014
     Region          22..312
                     /region_name="PI-PLCXD1c"
                     /note="Catalytic domain of phosphatidylinositol-specific
                     phospholipase C, X domain containing 1; cd08616"
                     /db_xref="CDD:176555"
     Site            order(40,101,117,148,197,215,217,297)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176555"
     Site            order(40,117)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176555"
     CDS             1..337
                     /gene="PLCXD1"
                     /coded_by="XM_041468526.1:214..1227"
                     /db_xref="GeneID:121354133"
ORIGIN      
        1 megplqtfvh vchengqwms qlpeklwdip lynlalpgsh dtmtycldks sdvsgneskl
       61 vkflnkclpc ivhpiimkws itqvltvteq leagvryldf riahkandps mnlyfvhmvy
      121 ttvtvqdilw eilrwlethp qevviiacrn fdgltkrlhn hlvacikeif qcklcprnvv
      181 ptlrtmwhlg hqlivsyeee velekhcelw ppipywwgnk tstraliryl ermkrmgrpg
      241 kffvaginlt enlryilvhp fgslkkmtlq slpclkiwik qqypgpkkkc iniiagdfig
      301 nngfvkdvie lntkinpplh cqseleqiaf nsqllnl
//
LOCUS       XP_041324462             337 aa            linear   VRT 06-MAY-2021
DEFINITION  PI-PLC X domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324462
VERSION     XP_041324462.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468528.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="PI-PLC X domain-containing protein 1"
                     /calculated_mol_wt=39014
     Region          22..312
                     /region_name="PI-PLCXD1c"
                     /note="Catalytic domain of phosphatidylinositol-specific
                     phospholipase C, X domain containing 1; cd08616"
                     /db_xref="CDD:176555"
     Site            order(40,101,117,148,197,215,217,297)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176555"
     Site            order(40,117)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176555"
     CDS             1..337
                     /gene="PLCXD1"
                     /coded_by="XM_041468528.1:305..1318"
                     /db_xref="GeneID:121354133"
ORIGIN      
        1 megplqtfvh vchengqwms qlpeklwdip lynlalpgsh dtmtycldks sdvsgneskl
       61 vkflnkclpc ivhpiimkws itqvltvteq leagvryldf riahkandps mnlyfvhmvy
      121 ttvtvqdilw eilrwlethp qevviiacrn fdgltkrlhn hlvacikeif qcklcprnvv
      181 ptlrtmwhlg hqlivsyeee velekhcelw ppipywwgnk tstraliryl ermkrmgrpg
      241 kffvaginlt enlryilvhp fgslkkmtlq slpclkiwik qqypgpkkkc iniiagdfig
      301 nngfvkdvie lntkinpplh cqseleqiaf nsqllnl
//
LOCUS       XP_041324463             337 aa            linear   VRT 06-MAY-2021
DEFINITION  PI-PLC X domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324463
VERSION     XP_041324463.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468529.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="PI-PLC X domain-containing protein 1"
                     /calculated_mol_wt=39014
     Region          22..312
                     /region_name="PI-PLCXD1c"
                     /note="Catalytic domain of phosphatidylinositol-specific
                     phospholipase C, X domain containing 1; cd08616"
                     /db_xref="CDD:176555"
     Site            order(40,101,117,148,197,215,217,297)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176555"
     Site            order(40,117)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176555"
     CDS             1..337
                     /gene="PLCXD1"
                     /coded_by="XM_041468529.1:108..1121"
                     /db_xref="GeneID:121354133"
ORIGIN      
        1 megplqtfvh vchengqwms qlpeklwdip lynlalpgsh dtmtycldks sdvsgneskl
       61 vkflnkclpc ivhpiimkws itqvltvteq leagvryldf riahkandps mnlyfvhmvy
      121 ttvtvqdilw eilrwlethp qevviiacrn fdgltkrlhn hlvacikeif qcklcprnvv
      181 ptlrtmwhlg hqlivsyeee velekhcelw ppipywwgnk tstraliryl ermkrmgrpg
      241 kffvaginlt enlryilvhp fgslkkmtlq slpclkiwik qqypgpkkkc iniiagdfig
      301 nngfvkdvie lntkinpplh cqseleqiaf nsqllnl
//
LOCUS       XP_041324464             439 aa            linear   VRT 06-MAY-2021
DEFINITION  POU domain, class 3, transcription factor 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324464
VERSION     XP_041324464.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468530.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..439
                     /product="POU domain, class 3, transcription factor 3"
                     /calculated_mol_wt=45706
     Region          253..327
                     /region_name="POU"
                     /note="Found in Pit-Oct-Unc transcription factors;
                     smart00352"
                     /db_xref="CDD:197673"
     Region          346..402
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..439
                     /gene="POU3F3"
                     /coded_by="XM_041468530.1:7..1326"
                     /db_xref="GeneID:121354134"
ORIGIN      
        1 maaatsnpyl pgngilaags ivhadsgggg ggggggmqpg svavtsvagg yrgdpaakmv
       61 qsdfmpgama asngghmlsh ahqwvtalph aaaaaaaaaa aaaeagspws gspvgmtgsp
      121 qqpppppdvk gsggrddlhs gaalhhrpph lgpphqghpa awgaaaaahl psmaggqqqq
      181 qsllysqpgg ftvngmlspp pggqslvhpg lvrgetpelg ehpghhhhhh hqhpghhpph
      241 hggvnshdph sdedtptsdd leqfakqfkq rriklgftqa dvglalgtly gnvfsqttic
      301 rfealqlsfk nmcklkplln kwleeadsst gsptsidkia aqgrkrkkrt sievsvkgal
      361 eshflkcpkp saqeitnlad slqlekevvr vwfcnrrqke krmtppgiqq qtpddvysqv
      421 gtvnsdtppp hhglqtsvq
//
LOCUS       XP_041324465             721 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic nucleotide-gated cation channel alpha-3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324465
VERSION     XP_041324465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..721
                     /product="cyclic nucleotide-gated cation channel alpha-3
                     isoform X1"
                     /calculated_mol_wt=82780
     Region          198..440
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          512..628
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(578..579,594..596)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(616..618,622..624)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          628..696
                     /region_name="CLZ"
                     /note="C-terminal leucine zipper domain of cyclic
                     nucleotide-gated channels; pfam16526"
                     /db_xref="CDD:465160"
     CDS             1..721
                     /gene="CNGA3"
                     /coded_by="XM_041468531.1:1..2166"
                     /db_xref="GeneID:121354135"
ORIGIN      
        1 makintqhsy pgvhslsvrt adedierien gyirtlslce dasselqgvi svegghvpes
       61 qassftgrga marlsrfvls vrswatrhsh haeqrpdsfl erirgpelve vstrqsnirs
      121 flgarerpga vnshwplarf nvnfsnntne dkkeekkevk eekkeekkdd kkddkkddkk
      181 keeqkkevfv idpssnlyyn wltviaapvf ynwcmlvcra cfdelqmdhv kmwlfldyls
      241 diiyvidmfv rfrtgfleqg llvqdekklr ehytktaqfk ldvlslvptd layfklglny
      301 pelrfnrllr isrlfeffdr tetrtnypnm frignlvlyi liiihwnaci yfaiskvigf
      361 gtdtwvypnv svpeyarlsr kyiyslywst ltlttigetp ppvkdeeylf vvidflvgvl
      421 ifativgnvg smisnmnasr aefqakvdsi kqymqfrkvt kdlearvikw fdylwtnkkt
      481 vdekevlknl pdklkaeiai nvhldtlkkv rifqdceagl lielvlklkp tvfspgdyic
      541 kkgdigremy iikegklavv addgitqfvv lsdgsyfgei silnikgsks gnrrtanirs
      601 igysdlfcls kddlmealte ypeakkalee kgrqilmkdn lideeaakag adpkdleeki
      661 grlevaldtl qtrfarlmae ytasqqkvkq rlarvetrvk kygsgslsva eaeaekpeek
      721 k
//
LOCUS       XP_041324466             671 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic nucleotide-gated cation channel alpha-3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324466
VERSION     XP_041324466.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468532.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..671
                     /product="cyclic nucleotide-gated cation channel alpha-3
                     isoform X2"
                     /calculated_mol_wt=76690
     Region          148..390
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          462..578
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(528..529,544..546)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(566..568,572..574)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          578..646
                     /region_name="CLZ"
                     /note="C-terminal leucine zipper domain of cyclic
                     nucleotide-gated channels; pfam16526"
                     /db_xref="CDD:465160"
     CDS             1..671
                     /gene="CNGA3"
                     /coded_by="XM_041468532.1:1..2016"
                     /db_xref="GeneID:121354135"
ORIGIN      
        1 makintqhsy pgvhslsvrt adedierien gyirtlslce dasselqgvi svegghvpes
       61 qassftgrga marlsrfvls vrswatrhsh haeqrpdsfl erirgpelve vstrqsnirs
      121 flgarerpga vnrqkkevfv idpssnlyyn wltviaapvf ynwcmlvcra cfdelqmdhv
      181 kmwlfldyls diiyvidmfv rfrtgfleqg llvqdekklr ehytktaqfk ldvlslvptd
      241 layfklglny pelrfnrllr isrlfeffdr tetrtnypnm frignlvlyi liiihwnaci
      301 yfaiskvigf gtdtwvypnv svpeyarlsr kyiyslywst ltlttigetp ppvkdeeylf
      361 vvidflvgvl ifativgnvg smisnmnasr aefqakvdsi kqymqfrkvt kdlearvikw
      421 fdylwtnkkt vdekevlknl pdklkaeiai nvhldtlkkv rifqdceagl lielvlklkp
      481 tvfspgdyic kkgdigremy iikegklavv addgitqfvv lsdgsyfgei silnikgsks
      541 gnrrtanirs igysdlfcls kddlmealte ypeakkalee kgrqilmkdn lideeaakag
      601 adpkdleeki grlevaldtl qtrfarlmae ytasqqkvkq rlarvetrvk kygsgslsva
      661 eaeaekpeek k
//
LOCUS       XP_041324467             682 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 17A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324467
VERSION     XP_041324467.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468533.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..682
                     /product="A-kinase anchor protein 17A isoform X1"
                     /calculated_mol_wt=80056
     Region          143..265
                     /region_name="RRM_AKAP17A"
                     /note="RNA recognition motif (RRM) found in A-kinase
                     anchor protein 17A (AKAP-17A) and similar proteins;
                     cd12264"
                     /db_xref="CDD:409708"
     Region          <269..>452
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..682
                     /gene="AKAP17A"
                     /coded_by="XM_041468533.1:775..2823"
                     /db_xref="GeneID:121354136"
ORIGIN      
        1 maaativhdt seavelcapc glylkpitkm tisvalpqlk qpgksisnwe vmerlkgmvq
       61 thqfstlris kstmdfirfe gevenkslvk sflacldgkt iklsgfsdil kvraaeykid
      121 fptrhdwdsf frdakdmnet lpgerpdtih leglpckwfa aketgsekps eevlikvfqk
      181 fgeirnvdip mldpyreemt grnfhtfsfg ghlnfeayvq yreyagfiea mnalrgmklm
      241 ykgddgkava cnikvsfdst khlsdasikk rqlerqklqe lekqreeqkr kekeaeekqk
      301 eeerkqrele eyererkree klrkreqkqk drevrrnkkq leklqaeeqr klqekiklee
      361 rklllaqrnl qsirliaell sraktvklle qeqneekicl qqleerrrlq eaelkrveee
      421 keralglqrk ekelreklln nllskkmdav nqnkeeteas qtdvlkspsa vphtvsssci
      481 tstsgqavtg klapgsqiev aspesvntqc kylngnihdk vhvkegqnlh ttnsercsdk
      541 rgsgvlscvp adnqdqkslp sydqntckkd fpceqdkrrt eprrrkshsc nsvnsdeskg
      601 rressrhrrd vshrdekhrr drryyrhssr sysprrsrsp rrrsasprrs ryrrtrsrer
      661 rrdrrersrs rrsvsrrrrh rr
//
LOCUS       XP_041324468             653 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 17A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324468
VERSION     XP_041324468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468534.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..653
                     /product="A-kinase anchor protein 17A isoform X2"
                     /calculated_mol_wt=77027
     Region          114..236
                     /region_name="RRM_AKAP17A"
                     /note="RNA recognition motif (RRM) found in A-kinase
                     anchor protein 17A (AKAP-17A) and similar proteins;
                     cd12264"
                     /db_xref="CDD:409708"
     Region          <240..>423
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..653
                     /gene="AKAP17A"
                     /coded_by="XM_041468534.1:201..2162"
                     /db_xref="GeneID:121354136"
ORIGIN      
        1 mtisvalpql kqpgksisnw evmerlkgmv qthqfstlri skstmdfirf egevenkslv
       61 ksflacldgk tiklsgfsdi lkvraaeyki dfptrhdwds ffrdakdmne tlpgerpdti
      121 hleglpckwf aaketgsekp seevlikvfq kfgeirnvdi pmldpyreem tgrnfhtfsf
      181 gghlnfeayv qyreyagfie amnalrgmkl mykgddgkav acnikvsfds tkhlsdasik
      241 krqlerqklq elekqreeqk rkekeaeekq keeerkqrel eeyererkre eklrkreqkq
      301 kdrevrrnkk qleklqaeeq rklqekikle erklllaqrn lqsirliael lsraktvkll
      361 eqeqneekic lqqleerrrl qeaelkrvee ekeralglqr kekelrekll nnllskkmda
      421 vnqnkeetea sqtdvlksps avphtvsssc itstsgqavt gklapgsqie vaspesvntq
      481 ckylngnihd kvhvkegqnl httnsercsd krgsgvlscv padnqdqksl psydqntckk
      541 dfpceqdkrr teprrrkshs cnsvnsdesk grressrhrr dvshrdekhr rdrryyrhss
      601 rsysprrsrs prrrsasprr sryrrtrsre rrrdrrersr srrsvsrrrr hrr
//
LOCUS       XP_041324469             653 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 17A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324469
VERSION     XP_041324469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..653
                     /product="A-kinase anchor protein 17A isoform X2"
                     /calculated_mol_wt=77027
     Region          114..236
                     /region_name="RRM_AKAP17A"
                     /note="RNA recognition motif (RRM) found in A-kinase
                     anchor protein 17A (AKAP-17A) and similar proteins;
                     cd12264"
                     /db_xref="CDD:409708"
     Region          <240..>423
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..653
                     /gene="AKAP17A"
                     /coded_by="XM_041468535.1:94..2055"
                     /db_xref="GeneID:121354136"
ORIGIN      
        1 mtisvalpql kqpgksisnw evmerlkgmv qthqfstlri skstmdfirf egevenkslv
       61 ksflacldgk tiklsgfsdi lkvraaeyki dfptrhdwds ffrdakdmne tlpgerpdti
      121 hleglpckwf aaketgsekp seevlikvfq kfgeirnvdi pmldpyreem tgrnfhtfsf
      181 gghlnfeayv qyreyagfie amnalrgmkl mykgddgkav acnikvsfds tkhlsdasik
      241 krqlerqklq elekqreeqk rkekeaeekq keeerkqrel eeyererkre eklrkreqkq
      301 kdrevrrnkk qleklqaeeq rklqekikle erklllaqrn lqsirliael lsraktvkll
      361 eqeqneekic lqqleerrrl qeaelkrvee ekeralglqr kekelrekll nnllskkmda
      421 vnqnkeetea sqtdvlksps avphtvsssc itstsgqavt gklapgsqie vaspesvntq
      481 ckylngnihd kvhvkegqnl httnsercsd krgsgvlscv padnqdqksl psydqntckk
      541 dfpceqdkrr teprrrkshs cnsvnsdesk grressrhrr dvshrdekhr rdrryyrhss
      601 rsysprrsrs prrrsasprr sryrrtrsre rrrdrrersr srrsvsrrrr hrr
//
LOCUS       XP_041324471             779 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/hydrogen exchanger 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324471
VERSION     XP_041324471.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468537.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..779
                     /product="sodium/hydrogen exchanger 4"
                     /calculated_mol_wt=88596
     Region          64..622
                     /region_name="b_cpa1"
                     /note="sodium/hydrogen exchanger 3; TIGR00840"
                     /db_xref="CDD:273294"
     CDS             1..779
                     /gene="SLC9A4"
                     /coded_by="XM_041468537.1:25..2364"
                     /db_xref="GeneID:121354137"
ORIGIN      
        1 mgsaklahak fsnmllllsv vscsaaaygg epslgkrsll hyehdssdav dssqdtrlhv
       61 ftldydyvqi pyevtlwill asfakigfhi fhrlprlmpe sciliaigal vgaiifashh
      121 ksppvmdssi yflyllppii leegyfmptr pffenfgsil wwsvlgslln sfgiglslyg
      181 vcqieafgls dlnllqnllf gsmisavdpv aalvvfeeas vneqlymmif gesllndgit
      241 vvlynifiaf tqmhryeeie sidvfagfar ffvvglggvl fgivfgfisa fmtrfthnis
      301 siepllvfmf sylsylsaet lyisgilamt acavtmkkyv eenvsqnsyt tikyfmkmls
      361 sisetlifvf mgvstvgknh ewnwaficft lffcliwrtl svfalfyisn kfrtypftfk
      421 dqliisysgl rgassfslaf llpvnlfprk nlfitativv iyftvfiqgi tigplvkyld
      481 vkktnkkesi neeihvrlmd hlkagiedic ghwshyqlrd kfkkfdnkyl kkilirehqp
      541 ksslvslykk meiklaiema esgmkiskps ttslqsgrkq rahrlspaev eamrdvlahn
      601 lyqvrqrapa ynrhnlptdt sekqaqeili rrehslrqsc rkgnslpwcr pinttevryf
      661 slpqgphqpt rrkarhvtft dqhrsgsdda lpltsrsqpr lrpleakqhe elipmahldr
      721 ragpcnlsgr rgnsirrhrf tradnpapmp karftvreve edeseeetet maparplvi
//
LOCUS       XP_041324472             392 aa            linear   VRT 06-MAY-2021
DEFINITION  cytokine receptor-like factor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324472
VERSION     XP_041324472.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468538.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="cytokine receptor-like factor 2"
                     /calculated_mol_wt=44644
     CDS             1..392
                     /gene="CRLF2"
                     /coded_by="XM_041468538.1:1..1179"
                     /db_xref="GeneID:121354138"
ORIGIN      
        1 mithfftvcc viptmrpifq aysmifilgn mvasqsqssg gkdainttii nfnnekmqit
       61 watrelfpne nvsffytfge gknkvwkpct tylldqdyns gclfktegpt laisirnsng
      121 seelfsknlk sdfyikpspp envtffweed tvtvscnkpe rnawclrfel qykskfdkew
      181 qsrtskccsv geqgfdprkc ysfrvrlrrl vpycnivkys sdwaaetfwm ngtlldscdd
      241 ditpqsktvi ilscslavll mmlillillc kwqrvqmsvl paipdpkypf adlfndhngn
      301 lqewldkndh vvlqtkleye epesiteaes qqedgknsdk qgplekiftf sgaaenndgk
      361 aaetaclipa pnttapfagf hilmnddmyv ml
//
LOCUS       XP_041324473             331 aa            linear   VRT 06-MAY-2021
DEFINITION  glycogenin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324473
VERSION     XP_041324473.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468539.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="glycogenin-2"
                     /calculated_mol_wt=37320
     Region          1..211
                     /region_name="GT8_Glycogenin"
                     /note="Glycogenin belongs the GT 8 family and initiates
                     the biosynthesis of glycogen; cd02537"
                     /db_xref="CDD:133018"
     Site            order(36..37,40,54,56..58,79,87..89,117..118,145..146,166,
                     168..169,172)
                     /site_type="active"
                     /note="substrate binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(56,58,166)
                     /site_type="active"
                     /note="Manganese binding site [active]"
                     /db_xref="CDD:133018"
     Site            order(78..79,118,136,138..139,143,147)
                     /site_type="active"
                     /note="dimer interface [active]"
                     /db_xref="CDD:133018"
     CDS             1..331
                     /gene="GYG2"
                     /coded_by="XM_041468539.1:132..1127"
                     /db_xref="GeneID:121354139"
ORIGIN      
        1 mrsvlssvfd evievdvlds adsvhlalmq rpelgvtftk lhcwtlthys kcvfmdadtl
       61 vlcnvdelfd reefsaapds gwpdcfnsgv fvfqpslkty nlllqfaaeh gsfdggdqgl
      121 lnsffsnwat adigkhlpfl ynlssssvyt yvpafnhfgr dakvvhflgt tkpwnykysl
      181 qtktvmqdgt nsgsshqlsf lalwwniysa silpllenlq kmeeseseec khtfngvevt
      241 lkkvspyvas siqepeipeq tgevnptacs peelafkane vahfvselsi hfkpakptpe
      301 derrkweegr mdymgkdafe hikkkldafl h
//
LOCUS       XP_041324474             707 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/hydrogen exchanger 7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324474
VERSION     XP_041324474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="sodium/hydrogen exchanger 7 isoform X1"
                     /calculated_mol_wt=78673
     Region          75..>538
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..707
                     /gene="SLC9A7"
                     /coded_by="XM_041468540.1:111..2234"
                     /db_xref="GeneID:121354140"
ORIGIN      
        1 maeplrrrlp llsllllaag glraaersgg ssssameela tekeaeeshr qdsvslltfi
       61 llltltilti wlfkhrrvrf lhetglamiy glivgvilry gtpstsghdk pfscsqedrp
      121 fttllvnvsg kffeytlkge ispgkihnve qndmlrkvtf dpevffnill ppiifhagys
      181 lkkrhffrnl gsilayaflg tavscfiign lmygvvklmk lvgqlsdkfy ytdcllfgai
      241 isatdpvtvl aifnelhadv dlyallfges vlndavaivl sssivayqpt genthafdaa
      301 affksvgvfl gifsgsfmmg avtgvvtalv tkftklhcfp lletalfflm swstfllaea
      361 cgftgvvavl fcgitqahyt ynnlsvesrs rtkqlfevlh flaenfifsy mglalftfqk
      421 hifspvfiig afvaiflgra ahiyplsfll nlgrrhkisw sfqhmmmfsg lrgamafala
      481 irdtatyshq mmfsttlliv fftvwivggg ttpmlswlni rvgdhvpsve emseshwlyf
      541 rvgvdpdqdp pptndsfqvl qgdgqdsarr nrtkqesawl frlwysfdhn ylkpilthsg
      601 ppltttlpsw cgliarclts pqvydnqeql reedsdfiln dgdltvtygd ttitangssg
      661 phtattnlds rrtkssseea lerdlgaadh evtsrgtrlv fpleyna
//
LOCUS       XP_041324475             687 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/hydrogen exchanger 7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324475
VERSION     XP_041324475.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468541.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="sodium/hydrogen exchanger 7 isoform X2"
                     /calculated_mol_wt=76286
     Region          75..577
                     /region_name="Na_H_Exchanger"
                     /note="Sodium/hydrogen exchanger family; cl01133"
                     /db_xref="CDD:470090"
     CDS             1..687
                     /gene="SLC9A7"
                     /coded_by="XM_041468541.1:112..2175"
                     /db_xref="GeneID:121354140"
ORIGIN      
        1 maeplrrrlp llsllllaag glraaersgg ssssameela tekeaeeshr qdsvslltfi
       61 llltltilti wlfkhrrvrf lhetglamiy glivgvilry gtpstsghdk pfscsqedrp
      121 fttllvnvsg kffeytlkge ispgkihnve qndmlrkvtf dpevffnill ppiifhagys
      181 lkkrhffrnl gsilayaflg tavscfiign lmygvvklmk lvgqlsdkfy ytdcllfgai
      241 isatdpvtvl aifnelhadv dlyallfges vlndavaivl sssivayqpt genthafdaa
      301 affksvgvfl gifsgsfmmg avtgvvtalv tkftklhcfp lletalfflm swstfllaea
      361 cgftgvvavl fcgitqahyt ynnlsvesrs rtkqlfevlh flaenfifsy mglalftfqk
      421 hifspvfiig afvaiflgra ahiyplsfll nlgrrhkisw sfqhmmmfsg lrgamafala
      481 irdtatyshq mmfsttlliv fftvwivggg ttpmlswlni rvgvdpdqdp pptndsfqvl
      541 qgdgqdsarr nrtkqesawl frlwysfdhn ylkpilthsg ppltttlpsw cgliarclts
      601 pqvydnqeql reedsdfiln dgdltvtygd ttitangssg phtattnlds rrtkssseea
      661 lerdlgaadh evtsrgtrlv fpleyna
//
LOCUS       XP_041324476             358 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041324476
VERSION     XP_041324476.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468542.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="carbohydrate sulfotransferase 10"
                     /calculated_mol_wt=42054
     Region          118..350
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..358
                     /gene="CHST10"
                     /coded_by="XM_041468542.1:358..1434"
                     /db_xref="GeneID:121354141"
ORIGIN      
        1 mhhrwlllaa cfwvifmfmv askfitltfk dpdgygakqe pliltavtkv eevhvpeekh
       61 wpeefqptgk afsgnlirqp lvhmerlell rnvcrdttlr dlshtavskf vldrifvcdk
      121 hkilfcqtpk vgntqwkkvl ivlngafssi eeipenivhd heknglprls sfsdseikkr
      181 lnlyfkffiv rdpferlisa fkdkfvhnpr fepwyrheia pgiirkyrkn rtetkglqfe
      241 dfvrylgdpn hrwldvqfgd hiihwvtyve lcapceitys vighhetled dapyilkaag
      301 idhlvsypti ppgitvynrt kveryfsgis krdirrlyar fegdfklfgy repdflln
//
LOCUS       XP_041324477             358 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041324477
VERSION     XP_041324477.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468543.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="carbohydrate sulfotransferase 10"
                     /calculated_mol_wt=42054
     Region          118..350
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..358
                     /gene="CHST10"
                     /coded_by="XM_041468543.1:218..1294"
                     /db_xref="GeneID:121354141"
ORIGIN      
        1 mhhrwlllaa cfwvifmfmv askfitltfk dpdgygakqe pliltavtkv eevhvpeekh
       61 wpeefqptgk afsgnlirqp lvhmerlell rnvcrdttlr dlshtavskf vldrifvcdk
      121 hkilfcqtpk vgntqwkkvl ivlngafssi eeipenivhd heknglprls sfsdseikkr
      181 lnlyfkffiv rdpferlisa fkdkfvhnpr fepwyrheia pgiirkyrkn rtetkglqfe
      241 dfvrylgdpn hrwldvqfgd hiihwvtyve lcapceitys vighhetled dapyilkaag
      301 idhlvsypti ppgitvynrt kveryfsgis krdirrlyar fegdfklfgy repdflln
//
LOCUS       XP_041324478             358 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041324478
VERSION     XP_041324478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="carbohydrate sulfotransferase 10"
                     /calculated_mol_wt=42054
     Region          118..350
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..358
                     /gene="CHST10"
                     /coded_by="XM_041468544.1:305..1381"
                     /db_xref="GeneID:121354141"
ORIGIN      
        1 mhhrwlllaa cfwvifmfmv askfitltfk dpdgygakqe pliltavtkv eevhvpeekh
       61 wpeefqptgk afsgnlirqp lvhmerlell rnvcrdttlr dlshtavskf vldrifvcdk
      121 hkilfcqtpk vgntqwkkvl ivlngafssi eeipenivhd heknglprls sfsdseikkr
      181 lnlyfkffiv rdpferlisa fkdkfvhnpr fepwyrheia pgiirkyrkn rtetkglqfe
      241 dfvrylgdpn hrwldvqfgd hiihwvtyve lcapceitys vighhetled dapyilkaag
      301 idhlvsypti ppgitvynrt kveryfsgis krdirrlyar fegdfklfgy repdflln
//
LOCUS       XP_041324479             467 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324479
VERSION     XP_041324479.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468545.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="carbohydrate sulfotransferase 7"
                     /calculated_mol_wt=52703
     Region          <333..455
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; cl21551"
                     /db_xref="CDD:473908"
     CDS             1..467
                     /gene="CHST7"
                     /coded_by="XM_041468545.1:114..1517"
                     /db_xref="GeneID:121354143"
ORIGIN      
        1 mkgrrrwrge hrrfaavlvl ytllllllvp yaldygarrg rtdeepllrr cpsleealse
       61 wgweqrppld eeeeedeagt agaagngsag tagkrhiylh atwrtgssfl gelfnqhpdv
      121 fylyepmwhl wqalypgdal slqgalrdml ralfrcdfsv lrlytapsgp rdplapappa
      181 adnlttasif gwrtnkvics pplcpaaprp rgeiglvdga tceetcppra lreleaecrk
      241 ypvvvikdvr llelgallpl lrepglnlrv vqlfrdprav hnsrlkarqa llresvqvlr
      301 srhraeprgp arhqqqhlll ppgllgggrp pqpqhraeff lggalevicq swlrdlllar
      361 rapdwlrrry tqlryedlvr epraelrrll rfagltvppa ledfvvnmtr gaayssdrpf
      421 lisardarea vhawrerlsr qqvrqveaac geamsilayp lsagnar
//
LOCUS       XP_041324480             554 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-18 receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324480
VERSION     XP_041324480.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468546.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="interleukin-18 receptor 1"
                     /calculated_mol_wt=63902
     Region          28..>92
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          34..37
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          52..56
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          77..81
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          125..207
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          137..141
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          152..155
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          168..171
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          181..186
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          198..201
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          224..325
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          232..236
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          249..253
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          290..294
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          305..310
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          317..320
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          383..532
                     /region_name="TIR"
                     /note="Toll - interleukin 1 - resistance; smart00255"
                     /db_xref="CDD:214587"
     CDS             1..554
                     /gene="IL18R1"
                     /coded_by="XM_041468546.1:154..1818"
                     /db_xref="GeneID:121354144"
ORIGIN      
        1 mtlmiflvil imesatgklc pirasidvle geyfflcyle srqehfqaea ytinwykesa
       61 gkqqviketr rivsqmnlle fwpaelsdsg nysvihsngk qnatiqkwtl nvlernkssc
      121 fnenhlttei ksagtghslk csdlsvyend sitwykdckn yehetereln fraltvqnsg
      181 iytckilish egtiyhstnt iklvveedap eaftleilgt hekfeteigk eeilnctgsl
      241 gyymredasl ywlinqtfpe qctgipenep siceeelktl qlgnkfyitr llrikkvrde
      301 dmhhnftcml qadestqiki vklkkgkiqd lpvhifttgm vlallfpfva vavvfvvvmf
      361 rvdfvlfyrn icrrddtagd gkeydafvsy lkdcvsptee erefalkvlp mileenfgyk
      421 lciferdvfp ggalvddihs fidksrrlii ilsqnyvsdr aiyelesglh kalverktki
      481 ilieympisd ynflpeslsl lpskrvvkwk kdkslpvnsr fwknlrylmp akpiktktkg
      541 hysnfelgse taqp
//
LOCUS       XP_041324482            4839 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase HERC2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324482
VERSION     XP_041324482.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468548.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4839
                     /product="E3 ubiquitin-protein ligase HERC2 isoform X1"
                     /calculated_mol_wt=528929
     Region          438..741
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          1212..1284
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     Region          1872..1932
                     /region_name="MIB_HERC2"
                     /note="Mib_herc2; pfam06701"
                     /db_xref="CDD:461991"
     Region          2462..2509
                     /region_name="UBA_HERC2"
                     /note="UBA domain found in probable E3 ubiquitin-protein
                     ligase HERC2 and similar proteins; cd14402"
                     /db_xref="CDD:270585"
     Region          2558..2635
                     /region_name="Cul7"
                     /note="Mouse development and cellular proliferation
                     protein Cullin-7; pfam11515"
                     /db_xref="CDD:463286"
     Region          2643..2700
                     /region_name="SH3_15"
                     /note="Mind bomb SH3 repeat domain; pfam18346"
                     /db_xref="CDD:465720"
     Region          2710..2754
                     /region_name="ZZ_HERC2"
                     /note="Zinc finger, ZZ type. Zinc finger present in HERC2
                     and related proteins. HERC2 is a potential E3 ubiquitin
                     protein ligase and/or guanine nucleotide exchange factor.
                     The ZZ motif coordinates two zinc ions and most likely
                     participates in ligand binding or...; cd02344"
                     /db_xref="CDD:239084"
     Site            order(2712,2715,2727,2730,2736,2739,2745,2749)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239084"
     Site            order(2712,2715,2736,2739)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239084"
     Site            order(2713,2724,2726,2732,2734)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239084"
     Site            order(2725,2740,2751,2754)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239084"
     Site            order(2727,2730,2745,2749)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239084"
     Region          2769..2914
                     /region_name="APC10-HERC2"
                     /note="APC10-like DOC1 domain present in HERC2 (HECT
                     domain and RLD2); cd08664"
                     /db_xref="CDD:176485"
     Site            order(2812,2840,2846,2848,2907)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:176485"
     Region          2952..3305
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          3949..4297
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          4426..4797
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(4432,4478,4489,4556,4727,4761..4762,4765..4769,4789,
                     4796)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(4584,4587..4588,4590..4591,4594,4601,4604..4605,
                     4607,4613,4618,4635,4639)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..4839
                     /gene="HERC2"
                     /coded_by="XM_041468548.1:201..14720"
                     /db_xref="GeneID:121354146"
ORIGIN      
        1 mssdsfclsa qarfdskwlk tdlqlaftrd glcglwnemv kdgeivypgt eliqsgelpp
       61 rkddstecqt askkeeqndk ekkdeeetpv ptyraksive swvwgkqpdv nelkeclqvl
      121 vkeqqtlatq tattalsamr lkqrlviler yfialnravl qenikvkwks ssvplpavdk
      181 kssrpvgkgv eglarvgsra alsfafaflr rawrsgedad lcsellqesl dalralpeas
      241 lfdegtvssv wlevveratk flrsvvtgdv hgapstkgpg niplqdqhla laillelavq
      301 rgtlsqmlsa vmlllqlwdn gtretdners aqgtsapllp llqrfqsiic nkdmpnteee
      361 iqlltyplsp nesflryltl pqdnelaidl rqtavvimah ldrlatpcmp pqcssptshk
      421 gslqeviawg ligwkyyanv sgpiqcegla nlgvvqvaca ekrflilsrn grvytqayns
      481 dtlgpqlvqs lasrnivkia ahsdghhyla lsangevfsw gcgdggrlgh gdtvpleepk
      541 misalsgkqa gkhvvhiacg stysaaitae gelytwgrgn ygrlghgsse dqtipmlvtg
      601 lkglkvidvs cgsgdaqtla vtengqvwsw gdgdygklgr ggsdgcktpk lieklqdldi
      661 vkvrcgsqfs ialtkdgqvy twgkgdnqrl ghgteehvry pklleglkgk kvidvaagst
      721 hclaltedse vhswgsndqc qhfdtlritk pepaalpgld tkhivgiacg paqsfawssc
      781 sewsiglrvp fvvdvcpmtf eqldlllrqv tegmdgssdw pppqekecma vatlnllrlq
      841 lhaaishqvd peclglglgs illnslkqtv vtlasnagvl ntvqsaaqav lqsgwsvllp
      901 taeerarals allpsavsgn emnvspgrrf midllvgslm adgglesaln aaitaeiqdi
      961 eakkeaqkek eideqeanas tlhrsrtpld kdlintgiye sagkqslplv qliqqllrni
     1021 asqtiaklkd varrisscme qelyskersa sldlllrfqr llvsklypad cvgqvpntys
     1081 pdllgvgsll kkytallcth isdilpvats iactshrhfa evscvvdgdl tgillpelvv
     1141 sivlllskna glmqeagaip llagllehld rfnhlapgke rddnedlawp gimgsfftgq
     1201 scrnneevtl irkadlenhn kdggfwtvid gkvydikdfq tqsltgssil aqfagedpvv
     1261 aleaalqfed tresmhafcv gqyiepdqev ittpdlstls splidternl glllglhasy
     1321 lamstplspl eiecakwlks sifsgglqts qihysyneek dedhcsspgn ttpnksklyt
     1381 hrltlsdhsq pflqaiadnn iqdhtvkdfl cqieryckqc hlttpitfpp ehpveevgrl
     1441 llccllkhed lghvalslvh pgtlgvdqvk hktlpksvvd vcrvvyqakc slikthqeqg
     1501 rsykevcapv ierlrflfne lrpavcndls imskfkllss lprwrrvaqk iirekrkkrv
     1561 pkksesadve eskigneesd leescvvphs pvpidkkpip ikspkdkwqp ilstvtgvhk
     1621 ykwlkqnvqg lypqsallnt ivefalkeep vdvekmrkcl lkqleraevr legidtilkl
     1681 saknfllpsv qyamfcgwqr lipeganige pltdclkdvd lippfnrmll evtfgklyaw
     1741 aiqnvrnill danakfkelg lqpvplqtit nenpagpslg tipqarfllv mlnmltlqhg
     1801 antlslllns gmlaltqttl rligpssdni eedmiasshg asatvleesr kettpvqlpv
     1861 sgpelaammk igtrvvrgvd wkwgdqdgpt pglgrvigel gedgwirvqw dtgstnsyrm
     1921 gkegkydlkl aepppatqpt tedsdtedds egeqvernlh ptsmmltstv nllqtlclsa
     1981 gvhaevmqsd atrtlcgllr mlvesgtidk saslpnklvy keqhrswctl gfirsialmp
     2041 qmcstlstsq witllmkive ghesftaasl qrqilavhll kavlpswdkn ersrdmkflv
     2101 eklfgflgsl lstcssdipl lrestlrrrk arpqasltat hsstlaeeiv allrtlhsls
     2161 qwnglinkyi nsqltsithi fagkqsegav lddyfpdten pevgalmavl aviggidsrl
     2221 rlggqvvhde fgegtvtrit pkgkitvqfy dmrtcrvcpl nqlkplpvva fnvnnlpfte
     2281 pmlsiwaqlv nlagskiekq rmkspnqgls gqvdldllrc qqlklyilka grallshqdt
     2341 lrqilsqpav qecssnpaed gavaspdlgd mspegpqppm illqqllsaa tqpspvkaif
     2401 dkqeleaaal avcqylaves thpstplfed cssseattpi tvqhirptkv kkrkqspipp
     2461 lpivvqlmem gfprkniefa lkslsgtsgs asglpgveal vgwlldhpdv qitdlsdadt
     2521 isdeysdeei aeeveeaeaa cpvssgavvt esqtykkrad flsnddyavy vreniqvgmm
     2581 vrccrtyeev cegdvgkvik ldrdglhdln vqcdwqqkgg tywvryihve llgfppqssa
     2641 shikigdkvr vkssvttpky kwgsvthrsv givkafsang kdvivdfpqq shwtgllsem
     2701 elvpsihpgv tcdgcqmfpi ngprfkcrnc ddfdfcetcf ktrkhntrht fgrinepgqs
     2761 pvfsgrsgkq lkrrhnsqrg mllddwsriv knlnvsssvn qasrlidgse qcwqssgsqg
     2821 khwirleifp dvlvhrlkmi vdpadssymp slvvvsggns lnnlielkti ninptdttvp
     2881 llsdcteyhr yieiaikqcr ssgidckihg lsilgrirae dedlaavpfl asdneeeddd
     2941 kantgslvrk kaaglesaat irtkvfvwgl ndkdqlgglk gskikvpsfs etlsalnvvq
     3001 vaggskslfa vtvegkvyac geatngrlgl gissgtvpip rqitalsnyv vkkvavhsgg
     3061 rhamaltvdg kvfswgegdd gklghfsrmn cdkprlieal ktkrirdiac gsshsaaits
     3121 sgelytwglg eygrlghgdn ttqlkpkmvk vllghrviqv acgsrdaqtl altdeglvfs
     3181 wgdgdfgklg rggsegcnip qnierlngqg vcqiecgaqf slaltksgvv wtwgkgdyfr
     3241 lghgtdvhvr kpqvveglrg kkivhvavga lhclavtdtg qvyawgdndh gqqgngtttv
     3301 nrkptlvqgl egqkitrvac gsshsvawtt vdvatpsvhe pvlfqtardp lgasylgvps
     3361 dadssaasnk isgvnsskpn rpslakills ldgnvakqqa lshilialqi myardavvga
     3421 lmpasmiapv ecpssspapp sdatsagspa ngdecvlvgd ieerlspnpw qdrrgevvps
     3481 edavtpsavt psaaaassrp fipvtddpga asiiaetmtk tkedvesqsk vsgpepqyld
     3541 eftsllvpdd trvmvdllkl avsnragekg rdvlsavlsg mgtaypqvad mllelcvtel
     3601 edvatdsqsg rlssqpvvve sshpytddts ssgtvkipga eglrvefdrq csterrhdpl
     3661 timdgvnriv svrsgrewsd wsselripgd elkwkfisdg svngwgwrft vypimpaagp
     3721 kdllsdrcil scpsmdlvtc lldfrlnfas nrsivprlaa slaacaqlsa laaghrmwal
     3781 qrlrklltte fgqsininri lgdnegetra lsftgsalaa lvkglpealq rqfdyedpiv
     3841 rggkqllhsp ffkvlvalac dleldtlpcc aethkwawfr rycmasrvav aldkrtplpr
     3901 lfldevakki relmadnenm dvlhechdvf kreqdeqlvq wmnrrpddwt lsaggsgtiy
     3961 gwghnhrgql ggiegakvkv ptpcealatl rpvqliggeq tlfavtadgk lyatgygagg
     4021 rlgiggtesv stptllesiq hvfikkvavn sggkhclals fegevyswge aedgklghgn
     4081 rspcdrprvi eslrgievvd iaaggahsac itaagdlftw gkgrygrlgh gdsedqlkpk
     4141 lvealqgyrv idiacgsgda qtlcltdddt vwswgdgdyg klgrggsdgc kvpmkidslt
     4201 glgvvkvecg sqfsvaltks gavytwgkgd yhrlghgsdd hvrrprqvqg lqgkkviaia
     4261 tgslhcvcct edgevytwgd ndegqlgdgt tnaiqrprlv aalqgkkinr vacgsahtla
     4321 wstskpanag klptqvpmey nhlqeipiis lrnrllllhh iselfcpcip mfdlegrlde
     4381 tgqgpsvgfd tlrgilisqg keaafrkvvq atmvrdrqhg pvvelnriqv krsrskggla
     4441 gpdgtksvfg qmcakmssfs pdslllphrv wkvkfvgesv ddcgggyses iaemceelqn
     4501 gltpllivtp ngrdesganr dcfllnpaak sllhmnmfrf lgvllgiair tgsplslnla
     4561 epvwkqlagm nltiadlsev dkdfipglmy irdneatsee feamslpftv pnasgqdiql
     4621 sskythitld nraeyvrlai nyrlhefdeq vaavregmar vvpvpllslf tgyeletmvc
     4681 gspdiplhll ksvatykgie ptasliqwfw evmesfsnte rslflrfvwg rtrlprtiad
     4741 frgrdfviqv ldkynppdhf lpesytcffl lklprysckq vleeklkyai hfcksidtdd
     4801 yarialtgep aaddssddsd nedadsfasd stqdyltgh
//
LOCUS       XP_041324483            4834 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase HERC2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324483
VERSION     XP_041324483.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468549.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4834
                     /product="E3 ubiquitin-protein ligase HERC2 isoform X2"
                     /calculated_mol_wt=528485
     Region          433..736
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          1207..1279
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     Region          1867..1927
                     /region_name="MIB_HERC2"
                     /note="Mib_herc2; pfam06701"
                     /db_xref="CDD:461991"
     Region          2457..2504
                     /region_name="UBA_HERC2"
                     /note="UBA domain found in probable E3 ubiquitin-protein
                     ligase HERC2 and similar proteins; cd14402"
                     /db_xref="CDD:270585"
     Region          2553..2630
                     /region_name="Cul7"
                     /note="Mouse development and cellular proliferation
                     protein Cullin-7; pfam11515"
                     /db_xref="CDD:463286"
     Region          2638..2695
                     /region_name="SH3_15"
                     /note="Mind bomb SH3 repeat domain; pfam18346"
                     /db_xref="CDD:465720"
     Region          2705..2749
                     /region_name="ZZ_HERC2"
                     /note="Zinc finger, ZZ type. Zinc finger present in HERC2
                     and related proteins. HERC2 is a potential E3 ubiquitin
                     protein ligase and/or guanine nucleotide exchange factor.
                     The ZZ motif coordinates two zinc ions and most likely
                     participates in ligand binding or...; cd02344"
                     /db_xref="CDD:239084"
     Site            order(2707,2710,2722,2725,2731,2734,2740,2744)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239084"
     Site            order(2707,2710,2731,2734)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239084"
     Site            order(2708,2719,2721,2727,2729)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239084"
     Site            order(2720,2735,2746,2749)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239084"
     Site            order(2722,2725,2740,2744)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239084"
     Region          2764..2909
                     /region_name="APC10-HERC2"
                     /note="APC10-like DOC1 domain present in HERC2 (HECT
                     domain and RLD2); cd08664"
                     /db_xref="CDD:176485"
     Site            order(2807,2835,2841,2843,2902)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:176485"
     Region          2947..3300
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          3944..4292
                     /region_name="ATS1"
                     /note="Alpha-tubulin suppressor ATS1 and related RCC1
                     domain-containing proteins [Cell cycle control, cell
                     division, chromosome partitioning, Cytoskeleton]; COG5184"
                     /db_xref="CDD:444065"
     Region          4421..4792
                     /region_name="HECTc"
                     /note="HECT domain; C-terminal catalytic domain of a
                     subclass of Ubiquitin-protein ligase (E3). It binds
                     specific ubiquitin-conjugating enzymes (E2), accepts
                     ubiquitin from E2, transfers ubiquitin to substrate lysine
                     side chains, and transfers additional...; cd00078"
                     /db_xref="CDD:238033"
     Site            order(4427,4473,4484,4551,4722,4756..4757,4760..4764,4784,
                     4791)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Site            order(4579,4582..4583,4585..4586,4589,4596,4599..4600,
                     4602,4608,4613,4630,4634)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..4834
                     /gene="HERC2"
                     /coded_by="XM_041468549.1:201..14705"
                     /db_xref="GeneID:121354146"
ORIGIN      
        1 mssdsfclsa qarfdskwlk tdlqlaftrd glcglwnemv kdgeivypgt eliqsgelpp
       61 rkddstecqt askkeeqndk ekkdeeetpv ptyraksive swvwgkqpdv nelkeclqvl
      121 vkeqqtlatq tattalsamr lkqrlviler yfialnravl qenikvkwks ssvplpavdk
      181 kssrpvgkgv eglarvgsra alsfafaflr rawrsgedad lcsellqesl dalralpeas
      241 lfdegtvssv wlevveratk flrdvhgaps tkgpgniplq dqhlalaill elavqrgtls
      301 qmlsavmlll qlwdngtret dnersaqgts apllpllqrf qsiicnkdmp nteeeiqllt
      361 yplspnesfl ryltlpqdne laidlrqtav vimahldrla tpcmppqcss ptshkgslqe
      421 viawgligwk yyanvsgpiq ceglanlgvv qvacaekrfl ilsrngrvyt qaynsdtlgp
      481 qlvqslasrn ivkiaahsdg hhylalsang evfswgcgdg grlghgdtvp leepkmisal
      541 sgkqagkhvv hiacgstysa aitaegelyt wgrgnygrlg hgssedqtip mlvtglkglk
      601 vidvscgsgd aqtlavteng qvwswgdgdy gklgrggsdg cktpkliekl qdldivkvrc
      661 gsqfsialtk dgqvytwgkg dnqrlghgte ehvrypklle glkgkkvidv aagsthclal
      721 tedsevhswg sndqcqhfdt lritkpepaa lpgldtkhiv giacgpaqsf awsscsewsi
      781 glrvpfvvdv cpmtfeqldl llrqvtegmd gssdwpppqe kecmavatln llrlqlhaai
      841 shqvdpeclg lglgsillns lkqtvvtlas nagvlntvqs aaqavlqsgw svllptaeer
      901 aralsallps avsgnemnvs pgrrfmidll vgslmadggl esalnaaita eiqdieakke
      961 aqkekeideq eanastlhrs rtpldkdlin tgiyesagkq slplvqliqq llrniasqti
     1021 aklkdvarri sscmeqelys kersasldll lrfqrllvsk lypadcvgqv pntyspdllg
     1081 vgsllkkyta llcthisdil pvatsiacts hrhfaevscv vdgdltgill pelvvsivll
     1141 lsknaglmqe agaipllagl lehldrfnhl apgkerddne dlawpgimgs fftgqscrnn
     1201 eevtlirkad lenhnkdggf wtvidgkvyd ikdfqtqslt gssilaqfag edpvvaleaa
     1261 lqfedtresm hafcvgqyie pdqevittpd lstlssplid ternlglllg lhasylamst
     1321 plspleieca kwlkssifsg glqtsqihys yneekdedhc sspgnttpnk sklythrltl
     1381 sdhsqpflqa iadnniqdht vkdflcqier yckqchlttp itfppehpve evgrlllccl
     1441 lkhedlghva lslvhpgtlg vdqvkhktlp ksvvdvcrvv yqakcslikt hqeqgrsyke
     1501 vcapvierlr flfnelrpav cndlsimskf kllsslprwr rvaqkiirek rkkrvpkkse
     1561 sadveeskig neesdleesc vvphspvpid kkpipikspk dkwqpilstv tgvhkykwlk
     1621 qnvqglypqs allntivefa lkeepvdvek mrkcllkqle raevrlegid tilklsaknf
     1681 llpsvqyamf cgwqrlipeg anigepltdc lkdvdlippf nrmllevtfg klyawaiqnv
     1741 rnilldanak fkelglqpvp lqtitnenpa gpslgtipqa rfllvmlnml tlqhgantls
     1801 lllnsgmlal tqttlrligp ssdnieedmi asshgasatv leesrkettp vqlpvsgpel
     1861 aammkigtrv vrgvdwkwgd qdgptpglgr vigelgedgw irvqwdtgst nsyrmgkegk
     1921 ydlklaeppp atqpttedsd teddsegeqv ernlhptsmm ltstvnllqt lclsagvhae
     1981 vmqsdatrtl cgllrmlves gtidksaslp nklvykeqhr swctlgfirs ialmpqmcst
     2041 lstsqwitll mkiveghesf taaslqrqil avhllkavlp swdknersrd mkflveklfg
     2101 flgsllstcs sdipllrest lrrrkarpqa sltathsstl aeeivallrt lhslsqwngl
     2161 inkyinsqlt sithifagkq segavlddyf pdtenpevga lmavlavigg idsrlrlggq
     2221 vvhdefgegt vtritpkgki tvqfydmrtc rvcplnqlkp lpvvafnvnn lpftepmlsi
     2281 waqlvnlags kiekqrmksp nqglsgqvdl dllrcqqlkl yilkagrall shqdtlrqil
     2341 sqpavqecss npaedgavas pdlgdmspeg pqppmillqq llsaatqpsp vkaifdkqel
     2401 eaaalavcqy lavesthpst plfedcssse attpitvqhi rptkvkkrkq spipplpivv
     2461 qlmemgfprk niefalksls gtsgsasglp gvealvgwll dhpdvqitdl sdadtisdey
     2521 sdeeiaeeve eaeaacpvss gavvtesqty kkradflsnd dyavyvreni qvgmmvrccr
     2581 tyeevcegdv gkvikldrdg lhdlnvqcdw qqkggtywvr yihvellgfp pqssashiki
     2641 gdkvrvkssv ttpkykwgsv thrsvgivka fsangkdviv dfpqqshwtg llsemelvps
     2701 ihpgvtcdgc qmfpingprf kcrncddfdf cetcfktrkh ntrhtfgrin epgqspvfsg
     2761 rsgkqlkrrh nsqrgmlldd wsrivknlnv sssvnqasrl idgseqcwqs sgsqgkhwir
     2821 leifpdvlvh rlkmivdpad ssympslvvv sggnslnnli elktininpt dttvpllsdc
     2881 teyhryieia ikqcrssgid ckihglsilg riraededla avpflasdne eedddkantg
     2941 slvrkkaagl esaatirtkv fvwglndkdq lgglkgskik vpsfsetlsa lnvvqvaggs
     3001 kslfavtveg kvyacgeatn grlglgissg tvpiprqita lsnyvvkkva vhsggrhama
     3061 ltvdgkvfsw gegddgklgh fsrmncdkpr liealktkri rdiacgsshs aaitssgely
     3121 twglgeygrl ghgdnttqlk pkmvkvllgh rviqvacgsr daqtlaltde glvfswgdgd
     3181 fgklgrggse gcnipqnier lngqgvcqie cgaqfslalt ksgvvwtwgk gdyfrlghgt
     3241 dvhvrkpqvv eglrgkkivh vavgalhcla vtdtgqvyaw gdndhgqqgn gtttvnrkpt
     3301 lvqglegqki trvacgsshs vawttvdvat psvhepvlfq tardplgasy lgvpsdadss
     3361 aasnkisgvn sskpnrpsla killsldgnv akqqalshil ialqimyard avvgalmpas
     3421 miapvecpss spappsdats agspangdec vlvgdieerl spnpwqdrrg evvpsedavt
     3481 psavtpsaaa assrpfipvt ddpgaasiia etmtktkedv esqskvsgpe pqyldeftsl
     3541 lvpddtrvmv dllklavsnr agekgrdvls avlsgmgtay pqvadmllel cvteledvat
     3601 dsqsgrlssq pvvvesshpy tddtsssgtv kipgaeglrv efdrqcster rhdpltimdg
     3661 vnrivsvrsg rewsdwssel ripgdelkwk fisdgsvngw gwrftvypim paagpkdlls
     3721 drcilscpsm dlvtclldfr lnfasnrsiv prlaaslaac aqlsalaagh rmwalqrlrk
     3781 llttefgqsi ninrilgdne getralsftg salaalvkgl pealqrqfdy edpivrggkq
     3841 llhspffkvl valacdleld tlpccaethk wawfrrycma srvavaldkr tplprlflde
     3901 vakkirelma dnenmdvlhe chdvfkreqd eqlvqwmnrr pddwtlsagg sgtiygwghn
     3961 hrgqlggieg akvkvptpce alatlrpvql iggeqtlfav tadgklyatg ygaggrlgig
     4021 gtesvstptl lesiqhvfik kvavnsggkh clalsfegev yswgeaedgk lghgnrspcd
     4081 rprvieslrg ievvdiaagg ahsacitaag dlftwgkgry grlghgdsed qlkpklveal
     4141 qgyrvidiac gsgdaqtlcl tdddtvwswg dgdygklgrg gsdgckvpmk idsltglgvv
     4201 kvecgsqfsv altksgavyt wgkgdyhrlg hgsddhvrrp rqvqglqgkk viaiatgslh
     4261 cvcctedgev ytwgdndegq lgdgttnaiq rprlvaalqg kkinrvacgs ahtlawstsk
     4321 panagklptq vpmeynhlqe ipiislrnrl lllhhiself cpcipmfdle grldetgqgp
     4381 svgfdtlrgi lisqgkeaaf rkvvqatmvr drqhgpvvel nriqvkrsrs kgglagpdgt
     4441 ksvfgqmcak mssfspdsll lphrvwkvkf vgesvddcgg gysesiaemc eelqngltpl
     4501 livtpngrde sganrdcfll npaaksllhm nmfrflgvll giairtgspl slnlaepvwk
     4561 qlagmnltia dlsevdkdfi pglmyirdne atseefeams lpftvpnasg qdiqlsskyt
     4621 hitldnraey vrlainyrlh efdeqvaavr egmarvvpvp llslftgyel etmvcgspdi
     4681 plhllksvat ykgieptasl iqwfwevmes fsnterslfl rfvwgrtrlp rtiadfrgrd
     4741 fviqvldkyn ppdhflpesy tcffllklpr ysckqvleek lkyaihfcks idtddyaria
     4801 ltgepaadds sddsdnedad sfasdstqdy ltgh
//
LOCUS       XP_041324484             189 aa            linear   VRT 06-MAY-2021
DEFINITION  phosducin-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324484
VERSION     XP_041324484.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468550.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..189
                     /product="phosducin-like protein 3"
                     /calculated_mol_wt=21433
     Region          <19..152
                     /region_name="Phd_like_VIAF"
                     /note="Phosducin (Phd)-like family, Viral inhibitor of
                     apoptosis (IAP)-associated factor (VIAF) subfamily; VIAF
                     is a Phd-like protein that functions in caspase activation
                     during apoptosis. It was identified as an IAP binding
                     protein through a screen of a human...; cd02988"
                     /db_xref="CDD:239286"
     CDS             1..189
                     /gene="PDCL3"
                     /coded_by="XM_041468550.1:19..588"
                     /db_xref="GeneID:121354147"
ORIGIN      
        1 mtleeleene defneedera iemyrqqrla emkaaqmknk fgevleisgk dyvqevtkag
       61 kgiwvvlhly kqgiplcali nqhmsglakk frdvkfikai sttcipnypd knlptifvyl
      121 egdikaqfig plvfggmnlt rdelewkise sgaiktdlee nprkqiqdql mssiracvpa
      181 rgesdsedd
//
LOCUS       XP_041324485             428 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein FAM155A [Pyrgilauda ruficollis].
ACCESSION   XP_041324485
VERSION     XP_041324485.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468551.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..428
                     /product="transmembrane protein FAM155A"
                     /calculated_mol_wt=46923
     Region          <239..>282
                     /region_name="Mid1"
                     /note="Stretch-activated Ca2+-permeable channel component;
                     pfam12929"
                     /db_xref="CDD:432882"
     CDS             1..428
                     /gene="NALF1"
                     /coded_by="XM_041468551.1:1..1287"
                     /db_xref="GeneID:121354148"
ORIGIN      
        1 mtrgawmcsr qyddglkiwf aprenekpft dseraqkwrl slasllfftv llsdhlwfca
       61 eakftgtgek eqpppekpep aepellagmg epappaprll appspslpps pgssgggsrg
      121 srtngteprh gkaaflgnst arpletcppp gsssgqcfsv gdaeavcqrr ggsgrprgtg
      181 qspapgwdlt dfylsfcnsy tlwelfagls npdtlncsld vvlkgesscs qcvqayqryd
      241 qhaqekyeef evmlqkylqs deysvkscpe dcktvykawl csqyfevtqf hcsnripckq
      301 yclevqtrcp filpdnddvi ygglssfict glyenyptna epeccdvrwg llsdhqpkgt
      361 iktsgstmch rtsltvssas rlcnsrlklc vlvlillhtv ltvsaaqntt glgfgsittl
      421 ednstnee
//
LOCUS       XP_041324486             448 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor receptor superfamily member EDAR [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324486
VERSION     XP_041324486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="tumor necrosis factor receptor superfamily
                     member EDAR"
                     /calculated_mol_wt=49339
     Region          13..148
                     /region_name="TNFRSF_EDAR"
                     /note="Tumor necrosis factor receptor superfamily member
                     ectodysplasin A receptor (EDAR); cd13421"
                     /db_xref="CDD:276926"
     Region          31..71
                     /region_name="CRD1"
                     /note="CRD1 [structural motif]"
                     /db_xref="CDD:276926"
     Region          74..113
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276926"
     Region          116..148
                     /region_name="CRD3"
                     /note="CRD3 [structural motif]"
                     /db_xref="CDD:276926"
     Region          355..429
                     /region_name="DD"
                     /note="Death Domain Superfamily of protein-protein
                     interaction domains; cl14633"
                     /db_xref="CDD:472698"
     CDS             1..448
                     /gene="EDAR"
                     /coded_by="XM_041468552.1:13..1359"
                     /db_xref="GeneID:121354149"
ORIGIN      
        1 mahlgerkwt hvfpflmvsl vysasaeysn cgeneyynqt tgmchdcpkc epgeepymtc
       61 gygtkdedyg cipcpsekfs kggyqicrrh kdcegffrat vmtpgdqend aecgpclpgy
      121 ymlenrprni ygmvcyscll appntkecag snsgisaifp stsgtstfsp yqhahkadls
      181 gqghlatali iamstifima iaivliimfy ivktkpsaqa cckshsvknv eaqantqeek
      241 kevqdnvvif sekeefeklt atpakavkse ndassenerl lsrsmdsdee aavdkqgtpe
      301 rcllslvhla rdksstsnks tgiqsrrkki ldvyanvcdv aeglsptelp fdclektsrm
      361 lsstynteka ivktwrhlae sfglkrdeig gmtdgmqlfd ristagysip elltklvqie
      421 rldaveslca dilewaqamp apepaets
//
LOCUS       XP_041324487             454 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 9 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324487
VERSION     XP_041324487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="major facilitator superfamily domain-containing
                     protein 9 isoform X1"
                     /calculated_mol_wt=48871
     Region          29..441
                     /region_name="MFS_MFSD9"
                     /note="Major facilitator superfamily domain-containing
                     protein 9; cd17390"
                     /db_xref="CDD:340948"
     Site            order(36..37,40..41,44,76,126..127,129..131,134,153,
                     156..157,160,272,275..276,279..281,284,312,316,367..368,
                     372,376,392,395..396,399..400,403)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340948"
     CDS             1..454
                     /gene="MFSD9"
                     /coded_by="XM_041468553.1:527..1891"
                     /db_xref="GeneID:121354150"
ORIGIN      
        1 meeeeedegg ggraasaspa gsarfvrcly avgfldlfgv smvvplmnlh ikslgashtv
       61 agiigslygv mqlfsstfvg cwsdvvgrry sllvcillsa lgyfllgnst tvflfaisrv
      121 pvgifkhtls iskallsdlv sdrdrplvmg rfnaassvgf ilgpvvggyl aefkggfyqt
      181 sficasifll ngglvwmlpw seentsnrdh yqdkeknsfs aksnhdhhlk sattravtns
      241 sffqspwiqv atvlkkikgi acsnlwdvfl vrflmsvail lyysnftlal eerfgvkplf
      301 sgylmsyssa lgvlagcllg pitrlyghdt yrlllhsstf tctlillyas apsiwmvvls
      361 stflafstti grtciidlel tvggneasgt llgvgqsvts vgriiaplls giaqefspcg
      421 ppslavglal vaivimnank qkyrsrgsvk lknq
//
LOCUS       XP_041324488             413 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 9 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324488
VERSION     XP_041324488.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468554.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="major facilitator superfamily domain-containing
                     protein 9 isoform X2"
                     /calculated_mol_wt=44650
     Region          1..400
                     /region_name="MFS_MFSD9"
                     /note="Major facilitator superfamily domain-containing
                     protein 9; cd17390"
                     /db_xref="CDD:340948"
     Site            order(3,35,85..86,88..90,93,112,115..116,119,231,234..235,
                     238..240,243,271,275,326..327,331,335,351,354..355,
                     358..359,362)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340948"
     CDS             1..413
                     /gene="MFSD9"
                     /coded_by="XM_041468554.1:364..1605"
                     /db_xref="GeneID:121354150"
ORIGIN      
        1 mvvplmnlhi kslgashtva giigslygvm qlfsstfvgc wsdvvgrrys llvcillsal
       61 gyfllgnstt vflfaisrvp vgifkhtlsi skallsdlvs drdrplvmgr fnaassvgfi
      121 lgpvvggyla efkggfyqts ficasiflln gglvwmlpws eentsnrdhy qdkeknsfsa
      181 ksnhdhhlks attravtnss ffqspwiqva tvlkkikgia csnlwdvflv rflmsvaill
      241 yysnftlale erfgvkplfs gylmsyssal gvlagcllgp itrlyghdty rlllhsstft
      301 ctlillyasa psiwmvvlss tflafsttig rtciidlelt vggneasgtl lgvgqsvtsv
      361 griiapllsg iaqefspcgp pslavglalv aivimnankq kyrsrgsvkl knq
//
LOCUS       XP_041324489             966 aa            linear   VRT 06-MAY-2021
DEFINITION  CRACD-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324489
VERSION     XP_041324489.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468555.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..966
                     /product="CRACD-like protein"
                     /calculated_mol_wt=106229
     Region          128..272
                     /region_name="DUF4592"
                     /note="Domain of unknown function (DUF4592); pfam15262"
                     /db_xref="CDD:464602"
     CDS             1..966
                     /gene="CRACDL"
                     /coded_by="XM_041468555.1:1..2901"
                     /db_xref="GeneID:121354151"
ORIGIN      
        1 msssrtmdpk mreaegdged nsgkkkskfk sfkkffgkkk rketsssvss slklcqstnd
       61 vaashdtrts ydsedeleth kgimgsrals hdsifiletg qeparpvrvf sqenisdrir
      121 alqlklqptm klgppppfgl hakrtedagt sseddglprs ppemsllhes lssgmrtrfs
      181 dshkhlssls lagtgseeee qitlgssrsr stdgqlyirh gsskagsprt sdstisptan
      241 fdtppelsaf ldnsaakhkl lvkprnqran rmrkfsqrtq sesltdlsct peeeeeddav
      301 fkpsnqelpc staatqdvas wpkprmpedl ppalrpvmtq pasepadgqe tllpenkped
      361 cqtaleitce esessllseg kdsatfshss sdrgvqkqed ssetlvllsg desinivnqe
      421 nkelptvfpl nklppeenis isknsivclg rseennqknd qvpveipcnk gadkeftlls
      481 esskefcmgp sqptnsfhvs ypassmqvgs safcspekik taqeatassk ensqslvhke
      541 eqlgkkaeka vnelnalkkf svssarerps trslyfpers elesplntgf flskakvssr
      601 nekwqddfqk esnldeekss skketllpes ysentgqpte slagyvspav davpmpsnss
      661 vvsqnqpsck dkspfqvklr stslslkyed nsppeskgik rysaefnlen egltsflrgg
      721 kaevrktant ntgdslneki kpkaksseql sckpplpkkp vlqsitipnt taskekqdka
      781 ihspesrned rdlekqstac kvpeksvpsp maagdsgrdp dtptepawis iarqkqrgmh
      841 qekeldrekl vapdnksnte kqnkakeqte gpvkqqwskp shlapkttse eqrkdtksea
      901 kseakpllrt nslshcvpva pspalmdkee ishlkkasna apnqpswmel akkksqawsd
      961 mpqiik
//
LOCUS       XP_041324490             818 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Jade-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324490
VERSION     XP_041324490.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468556.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..818
                     /product="protein Jade-3"
                     /calculated_mol_wt=92792
     Region          <90..179
                     /region_name="EPL1"
                     /note="Enhancer of polycomb-like; pfam10513"
                     /db_xref="CDD:463128"
     Region          140..>512
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          257..367
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(313,324..327,333,362)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..818
                     /gene="JADE3"
                     /coded_by="XM_041468556.1:170..2626"
                     /db_xref="GeneID:121354153"
ORIGIN      
        1 mkrhrhlsts dssdnespst sfsscskyrs ksktpaneqk kpaevfrkdl isamklpdsh
       61 hvnpdeyyvf adtwkqewek gvqvpaspet ipqpslrvva ekvkevlytr prkyihcssq
      121 eptepgyini lelaesvcry dlddmdifwl qelneeltem gcglldentm ektievlerh
      181 chenmnhaie teeglgieyd edvicdvcrs pdsedgndmv fcdkcnicvh qacygilkvp
      241 egswlcrtcv lgihpqcllc pkrggamkat rtgtkwahvs calwipevsi acpermepit
      301 kvshippsrw alvcslcklk tgaciqcsvk scitafhvtc afehslemkt ilddgdevkf
      361 ksyclkhskn kqnslpevee hpksvpeqkq tesektslra qklreleeef yslvkvedva
      421 aelglpklav dfiynywklk rksnfnkplf ppkedeengl vqpkedsiht rmrmfmhlrq
      481 dlervrnlcy mvsrreklkl shskvheqvf nlqvqlinqe iaaghtltsa lentlfyppp
      541 ritlklkmpk salgdcknns lkpgnrplsp dnsstvyskr svskesfeik aksyaryqhd
      601 srsngllagi gkprseakds gpmqlmefhr gqpsgkplal qaalhgqssi gngrvqqens
      661 rlvsksnglm gragdvsqrd sssqtsyeqe svltahlasq sgfrkstieh fsrsfkeatn
      721 slvrttedlr ccekptrrla tkdrlwskqt legapyqdnd gycpdlelsd seaesdenke
      781 qvrlrrssse respskdfgr dchnrnkknm ishssvqr
//
LOCUS       XP_041324491             818 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Jade-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324491
VERSION     XP_041324491.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468557.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..818
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..818
                     /product="protein Jade-3"
                     /calculated_mol_wt=92792
     Region          <90..179
                     /region_name="EPL1"
                     /note="Enhancer of polycomb-like; pfam10513"
                     /db_xref="CDD:463128"
     Region          140..>512
                     /region_name="COG5141"
                     /note="PHD zinc finger-containing protein [General
                     function prediction only]"
                     /db_xref="CDD:227470"
     Region          257..367
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Site            order(313,324..327,333,362)
                     /site_type="other"
                     /note="histone H3 binding site [polypeptide binding]"
                     /db_xref="CDD:276966"
     CDS             1..818
                     /gene="JADE3"
                     /coded_by="XM_041468557.1:91..2547"
                     /db_xref="GeneID:121354153"
ORIGIN      
        1 mkrhrhlsts dssdnespst sfsscskyrs ksktpaneqk kpaevfrkdl isamklpdsh
       61 hvnpdeyyvf adtwkqewek gvqvpaspet ipqpslrvva ekvkevlytr prkyihcssq
      121 eptepgyini lelaesvcry dlddmdifwl qelneeltem gcglldentm ektievlerh
      181 chenmnhaie teeglgieyd edvicdvcrs pdsedgndmv fcdkcnicvh qacygilkvp
      241 egswlcrtcv lgihpqcllc pkrggamkat rtgtkwahvs calwipevsi acpermepit
      301 kvshippsrw alvcslcklk tgaciqcsvk scitafhvtc afehslemkt ilddgdevkf
      361 ksyclkhskn kqnslpevee hpksvpeqkq tesektslra qklreleeef yslvkvedva
      421 aelglpklav dfiynywklk rksnfnkplf ppkedeengl vqpkedsiht rmrmfmhlrq
      481 dlervrnlcy mvsrreklkl shskvheqvf nlqvqlinqe iaaghtltsa lentlfyppp
      541 ritlklkmpk salgdcknns lkpgnrplsp dnsstvyskr svskesfeik aksyaryqhd
      601 srsngllagi gkprseakds gpmqlmefhr gqpsgkplal qaalhgqssi gngrvqqens
      661 rlvsksnglm gragdvsqrd sssqtsyeqe svltahlasq sgfrkstieh fsrsfkeatn
      721 slvrttedlr ccekptrrla tkdrlwskqt legapyqdnd gycpdlelsd seaesdenke
      781 qvrlrrssse respskdfgr dchnrnkknm ishssvqr
//
LOCUS       XP_041324492             333 aa            linear   VRT 06-MAY-2021
DEFINITION  ephrin-B2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324492
VERSION     XP_041324492.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468558.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="ephrin-B2"
                     /calculated_mol_wt=36696
     Region          31..167
                     /region_name="Ephrin-B_Ectodomain"
                     /note="Ectodomain of Ephrin B; cd10426"
                     /db_xref="CDD:259897"
     Site            order(59,98..100,105,108..109,111..113,115,117,119..125,
                     127)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:259897"
     CDS             1..333
                     /gene="EFNB2"
                     /coded_by="XM_041468558.1:1074..2075"
                     /db_xref="GeneID:121354154"
ORIGIN      
        1 maarrrdasa wkycwgavmv lcrtalarsi vldpiywnss npkflpgqgl vlypqigdkl
       61 diicpkvdsk tigqyeyykv ymvdkdqads caikkdntpl lncakpdqdv kftikfqefs
      121 pnlwglefqk nkdyyvists ngslegldnq eggvcqtktm kilmkvgqdp nsagqprhtd
      181 ptkrpeqeag tngkssttsp fvkdhsgsst dgskaghssi lgsevalfag iasgciifiv
      241 iiitlvvlll kyrrrhrkhs pqhtttlsls tlatpkrsgn nngsepsdii iplrtadsvf
      301 cphyekvsgd yghpvyivqe mppqspaniy ykv
//
LOCUS       XP_041324494             578 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity choline transporter 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324494
VERSION     XP_041324494.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468560.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="high affinity choline transporter 1"
                     /calculated_mol_wt=62983
     Region          8..495
                     /region_name="SLC5sbd_CHT"
                     /note="Na(+)- and Cl(-)-dependent choline cotransporter
                     CHT and related proteins; solute-binding domain; cd11474"
                     /db_xref="CDD:271368"
     Site            order(60,63,343,346..347)
                     /site_type="other"
                     /note="Na binding site [ion binding]"
                     /db_xref="CDD:271368"
     CDS             1..578
                     /gene="SLC5A7"
                     /coded_by="XM_041468560.1:1..1737"
                     /db_xref="GeneID:121354155"
ORIGIN      
        1 mafhveglva ivvfylaila vgiwaawktk ntgsegdrse aiivggrdig llvggftmta
       61 twvgggying taeavyvpdy glawaqapig yslslilggl ffakpmrskg yvtmldpfqq
      121 lygkrmggll fipalmgemf waaaifsalg atisviidin vnisviisal iatmytlvgg
      181 vysvaytdvv qlfciflglw isvpfamshp avtdigltav hhvyqapwlg sinsldlytw
      241 ldnfflltlg gipwqayfqr vlssssatya qvlsflaafg clvmaipavl igaigastaw
      301 nqteygvpdp kskkeadmil pivlqylcpv yisffglgav saavmssads silsassmfa
      361 rniyqlafrq nasdreivwv iritvllfga satamallas svyglwylss dliyiiifpq
      421 llcvlfikgt ntygaiagyl fglvlritgg epylylqpli fypgwyqddn nlyiqrfpfk
      481 tlamltsfft nvivsylaky lfesgtlppk ldfldavvar ysrehmdkat lvksdnivln
      541 elapvnprhs ltlsstftnk eafnyvdssp elsnaedn
//
LOCUS       XP_041324495             246 aa            linear   VRT 06-MAY-2021
DEFINITION  ashwin [Pyrgilauda ruficollis].
ACCESSION   XP_041324495
VERSION     XP_041324495.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468561.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="ashwin"
                     /calculated_mol_wt=26833
     Region          41..246
                     /region_name="Ashwin"
                     /note="Developmental protein; pfam15323"
                     /db_xref="CDD:464646"
     CDS             1..246
                     /gene="CUNH2orf49"
                     /coded_by="XM_041468561.1:21..761"
                     /db_xref="GeneID:121354156"
ORIGIN      
        1 maahgkaras ggsgeeergs ggseselell llhpellsee flrltleqkn ilgendvkmd
       61 kdgltdlyiq haiplpqrdl pksrwgrmme kkrqqndfks ekksvttveg lrkrplivfd
      121 gnststsikv kktengaadr lkpppagstt ntvrrlsvps nastylsass lsedaklgir
      181 nneaqqnnit ktdssvltgl kvcplspiag ttvvklkrsv pkeesdlpnd lkpseakkki
      241 qhvtwp
//
LOCUS       XP_041324496             590 aa            linear   VRT 06-MAY-2021
DEFINITION  arylsulfatase D-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324496
VERSION     XP_041324496.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468562.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..590
                     /product="arylsulfatase D-like isoform X1"
                     /calculated_mol_wt=66243
     Region          34..558
                     /region_name="ES"
                     /note="Estrone sulfatase; cd16159"
                     /db_xref="CDD:293778"
     Site            order(43..44,83,142,144,173,298,350..351,376..377)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293778"
     Site            order(83,142,144,173,298,376..377)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293778"
     CDS             1..590
                     /gene="LOC121354157"
                     /coded_by="XM_041468562.1:604..2376"
                     /db_xref="GeneID:121354157"
ORIGIN      
        1 miwqltshws plvtplifgl llqapftqps titqpnfvll laddlgigdv gcygndtirt
       61 pnidrlaeeg vkltqhiaaa plctpsraaf ltgryplrsg mdaindyrvi fwnagsgglp
      121 pnettfakil qhqgystgli gkwhqgvnce srndhchhpl khgfdyfygm pftlisdcqp
      181 tetpemdraf rrklwlstqm iglitltafl grltglisvh wrtltclagf sllffiswfs
      241 sygfvrywnc immrnhgite qpmvtdrtts lilresisfi ernkhkpfll flsflhshtp
      301 llttekflgr srhglygdnv eemdwmvgqv ldaidkeglk ettlvyfasd hggwlerqeg
      361 ekqlggwngi ykggkamggw eggirvpgif rwpgvlpagi iideptslmd iyptvvhlag
      421 gevpqdrvmd grdllpllrg avahsehefl fhycgahlha arwhqkdtga vwkahfmtpi
      481 frppgagacy drgfcpcfge gvthheppll felsqdpsea nplsadtepl fdtvirnigr
      541 aieehrrtlt pvpeqlsvsn vvwkpwlqpc cgtfpfcwcd kegdnklvdl
//
LOCUS       XP_041324497             590 aa            linear   VRT 06-MAY-2021
DEFINITION  arylsulfatase D-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324497
VERSION     XP_041324497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..590
                     /product="arylsulfatase D-like isoform X1"
                     /calculated_mol_wt=66243
     Region          34..558
                     /region_name="ES"
                     /note="Estrone sulfatase; cd16159"
                     /db_xref="CDD:293778"
     Site            order(43..44,83,142,144,173,298,350..351,376..377)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293778"
     Site            order(83,142,144,173,298,376..377)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293778"
     CDS             1..590
                     /gene="LOC121354157"
                     /coded_by="XM_041468563.1:598..2370"
                     /db_xref="GeneID:121354157"
ORIGIN      
        1 miwqltshws plvtplifgl llqapftqps titqpnfvll laddlgigdv gcygndtirt
       61 pnidrlaeeg vkltqhiaaa plctpsraaf ltgryplrsg mdaindyrvi fwnagsgglp
      121 pnettfakil qhqgystgli gkwhqgvnce srndhchhpl khgfdyfygm pftlisdcqp
      181 tetpemdraf rrklwlstqm iglitltafl grltglisvh wrtltclagf sllffiswfs
      241 sygfvrywnc immrnhgite qpmvtdrtts lilresisfi ernkhkpfll flsflhshtp
      301 llttekflgr srhglygdnv eemdwmvgqv ldaidkeglk ettlvyfasd hggwlerqeg
      361 ekqlggwngi ykggkamggw eggirvpgif rwpgvlpagi iideptslmd iyptvvhlag
      421 gevpqdrvmd grdllpllrg avahsehefl fhycgahlha arwhqkdtga vwkahfmtpi
      481 frppgagacy drgfcpcfge gvthheppll felsqdpsea nplsadtepl fdtvirnigr
      541 aieehrrtlt pvpeqlsvsn vvwkpwlqpc cgtfpfcwcd kegdnklvdl
//
LOCUS       XP_041324498             590 aa            linear   VRT 06-MAY-2021
DEFINITION  arylsulfatase D-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324498
VERSION     XP_041324498.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468564.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..590
                     /product="arylsulfatase D-like isoform X1"
                     /calculated_mol_wt=66243
     Region          34..558
                     /region_name="ES"
                     /note="Estrone sulfatase; cd16159"
                     /db_xref="CDD:293778"
     Site            order(43..44,83,142,144,173,298,350..351,376..377)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293778"
     Site            order(83,142,144,173,298,376..377)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293778"
     CDS             1..590
                     /gene="LOC121354157"
                     /coded_by="XM_041468564.1:550..2322"
                     /db_xref="GeneID:121354157"
ORIGIN      
        1 miwqltshws plvtplifgl llqapftqps titqpnfvll laddlgigdv gcygndtirt
       61 pnidrlaeeg vkltqhiaaa plctpsraaf ltgryplrsg mdaindyrvi fwnagsgglp
      121 pnettfakil qhqgystgli gkwhqgvnce srndhchhpl khgfdyfygm pftlisdcqp
      181 tetpemdraf rrklwlstqm iglitltafl grltglisvh wrtltclagf sllffiswfs
      241 sygfvrywnc immrnhgite qpmvtdrtts lilresisfi ernkhkpfll flsflhshtp
      301 llttekflgr srhglygdnv eemdwmvgqv ldaidkeglk ettlvyfasd hggwlerqeg
      361 ekqlggwngi ykggkamggw eggirvpgif rwpgvlpagi iideptslmd iyptvvhlag
      421 gevpqdrvmd grdllpllrg avahsehefl fhycgahlha arwhqkdtga vwkahfmtpi
      481 frppgagacy drgfcpcfge gvthheppll felsqdpsea nplsadtepl fdtvirnigr
      541 aieehrrtlt pvpeqlsvsn vvwkpwlqpc cgtfpfcwcd kegdnklvdl
//
LOCUS       XP_041324499             487 aa            linear   VRT 06-MAY-2021
DEFINITION  arylsulfatase D-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324499
VERSION     XP_041324499.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468565.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..487
                     /product="arylsulfatase D-like isoform X2"
                     /calculated_mol_wt=54688
     Region          34..467
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(43,83,298,350..351)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(43,83,298,351)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
     CDS             1..487
                     /gene="LOC121354157"
                     /coded_by="XM_041468565.1:608..2071"
                     /db_xref="GeneID:121354157"
ORIGIN      
        1 miwqltshws plvtplifgl llqapftqps titqpnfvll laddlgigdv gcygndtirt
       61 pnidrlaeeg vkltqhiaaa plctpsraaf ltgryplrsg mdaindyrvi fwnagsgglp
      121 pnettfakil qhqgystgli gkwhqgvnce srndhchhpl khgfdyfygm pftlisdcqp
      181 tetpemdraf rrklwlstqm iglitltafl grltglisvh wrtltclagf sllffiswfs
      241 sygfvrywnc immrnhgite qpmvtdrtts lilresisfi ernkhkpfll flsflhshtp
      301 llttekflgr srhglygdnv eemdwmvgqv ldaidkeglk ettlvyfasd hggwlerqeg
      361 ekqlggwngi ykggkamggw eggirvpgif rwpgvlpagi iideptslmd iyptvvhlag
      421 gevpqdrvmd grdllpllrg avahsehefl fhycgahlha arwhqkdnll elglvmtedf
      481 ahalgke
//
LOCUS       XP_041324500             555 aa            linear   VRT 06-MAY-2021
DEFINITION  regulator of nonsense transcripts 3A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324500
VERSION     XP_041324500.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468566.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..555
                     /product="regulator of nonsense transcripts 3A-like"
                     /calculated_mol_wt=64836
     Region          <172..289
                     /region_name="Smg4_UPF3"
                     /note="Smg-4/UPF3 family; pfam03467"
                     /db_xref="CDD:460932"
     CDS             1..555
                     /gene="LOC121354158"
                     /coded_by="XM_041468566.1:86..1753"
                     /db_xref="GeneID:121354158"
ORIGIN      
        1 mdapqlqesp rrdtdappnp splppplqpa pgkqreekkt alsksesvhs leywetpsvs
       61 agnhftfnce vkagyccska asdkgkstfl rlysstfqii laeynrlsgd vtesvwletf
      121 rthldmllps rsfwffniss gygikhkigg ctkpleidsa alygllltll yphlysrayi
      181 nfrnpedill frdrfdgyvf idnkgleypa vvefapfqki skkklkkkda kagsieddpe
      241 yrkflenyct dedkicanpe illgeieakt reliarrttp lleyiknrkl ekqrireekr
      301 eerrrrelek krlreeekrk rreeerrkrk evekqkkise keirikllrk pekgdelase
      361 khkekgeead teenkwdksp gsgsiksksl esslkeikek sqndsdkeqr dlerrfreke
      421 perqryrldd grkhrthyef dkfmrrneee lkwgkgynqd rgkkgnynys ftveavdklg
      481 kedkcddmas kkerirnkdr pamqlyqpga rirthmgpts ktydcsgksf edapdkkyea
      541 dnsagagsek teeae
//
LOCUS       XP_041324501             315 aa            linear   VRT 06-MAY-2021
DEFINITION  four and a half LIM domains protein 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324501
VERSION     XP_041324501.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468567.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="four and a half LIM domains protein 2 isoform
                     X1"
                     /calculated_mol_wt=36306
     Region          <41..69
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          72..133
                     /region_name="LIM1_FHL2"
                     /note="The first LIM domain of Four and a half LIM domains
                     protein 2 (FHL2); cd09422"
                     /db_xref="CDD:188806"
     Site            order(76,79,98,101,104,107,125,128)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188806"
     Region          137..193
                     /region_name="LIM2_FHL2"
                     /note="The second LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09426"
                     /db_xref="CDD:188810"
     Site            order(137,140,159,162,165,168,186,189)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188810"
     Region          198..254
                     /region_name="LIM3_Fhl2"
                     /note="The third LIM domain of Four and a half LIM domains
                     protein 2 (FHL2); cd09431"
                     /db_xref="CDD:188815"
     Site            order(198,201,218,221,224,227,245,248)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188815"
     Region          257..314
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(257,260,281,284,287,290,308,311)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..315
                     /gene="FHL2"
                     /coded_by="XM_041468567.1:68..1015"
                     /db_xref="GeneID:121354159"
ORIGIN      
        1 msrgstelqq dsdlpgmtwt lsllpwklas wtpdtnmter fdchyceesl fgkkyilked
       61 spycvkcyes lysntceeck kpigadckdl sykdrhwhet cfhcfqckns lvdkpfaake
      121 ehllctdcys neysskcnec kktimpgtrk meykgnswhe tcficyrcqq pigtksfipk
      181 dnqnfcvpcy ekqfamqcvq ckkaittggv tyreqpwhke cfvctackkq lsgqrftsrd
      241 efayclscfc nlyakkcagc tnpisglggt kyisfeerqw hndcfnckkc slslvgrgfl
      301 terddilcpe cgkdi
//
LOCUS       XP_041324502             279 aa            linear   VRT 06-MAY-2021
DEFINITION  four and a half LIM domains protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324502
VERSION     XP_041324502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468568.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..279
                     /product="four and a half LIM domains protein 2 isoform
                     X2"
                     /calculated_mol_wt=32259
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM1_FHL2"
                     /note="The first LIM domain of Four and a half LIM domains
                     protein 2 (FHL2); cd09422"
                     /db_xref="CDD:188806"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188806"
     Region          101..157
                     /region_name="LIM2_FHL2"
                     /note="The second LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09426"
                     /db_xref="CDD:188810"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188810"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_041468568.1:97..936"
                     /db_xref="GeneID:121354159"
ORIGIN      
        1 mterfdchyc eeslfgkkyi lkedspycvk cyeslysntc eeckkpigad ckdlsykdrh
       61 whetcfhcfq cknslvdkpf aakeehllct dcysneyssk cneckktimp gtrkmeykgn
      121 swhetcficy rcqqpigtks fipkdnqnfc vpcyekqfam qcvqckkait tggvtyreqp
      181 whkecfvcta ckkqlsgqrf tsrdefaycl scfcnlyakk cagctnpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpecgkdi
//
LOCUS       XP_041324503             279 aa            linear   VRT 06-MAY-2021
DEFINITION  four and a half LIM domains protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324503
VERSION     XP_041324503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468569.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..279
                     /product="four and a half LIM domains protein 2 isoform
                     X2"
                     /calculated_mol_wt=32259
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM1_FHL2"
                     /note="The first LIM domain of Four and a half LIM domains
                     protein 2 (FHL2); cd09422"
                     /db_xref="CDD:188806"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188806"
     Region          101..157
                     /region_name="LIM2_FHL2"
                     /note="The second LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09426"
                     /db_xref="CDD:188810"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188810"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_041468569.1:200..1039"
                     /db_xref="GeneID:121354159"
ORIGIN      
        1 mterfdchyc eeslfgkkyi lkedspycvk cyeslysntc eeckkpigad ckdlsykdrh
       61 whetcfhcfq cknslvdkpf aakeehllct dcysneyssk cneckktimp gtrkmeykgn
      121 swhetcficy rcqqpigtks fipkdnqnfc vpcyekqfam qcvqckkait tggvtyreqp
      181 whkecfvcta ckkqlsgqrf tsrdefaycl scfcnlyakk cagctnpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpecgkdi
//
LOCUS       XP_041324504             279 aa            linear   VRT 06-MAY-2021
DEFINITION  four and a half LIM domains protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324504
VERSION     XP_041324504.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468570.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..279
                     /product="four and a half LIM domains protein 2 isoform
                     X2"
                     /calculated_mol_wt=32259
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM1_FHL2"
                     /note="The first LIM domain of Four and a half LIM domains
                     protein 2 (FHL2); cd09422"
                     /db_xref="CDD:188806"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188806"
     Region          101..157
                     /region_name="LIM2_FHL2"
                     /note="The second LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09426"
                     /db_xref="CDD:188810"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188810"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_041468570.1:83..922"
                     /db_xref="GeneID:121354159"
ORIGIN      
        1 mterfdchyc eeslfgkkyi lkedspycvk cyeslysntc eeckkpigad ckdlsykdrh
       61 whetcfhcfq cknslvdkpf aakeehllct dcysneyssk cneckktimp gtrkmeykgn
      121 swhetcficy rcqqpigtks fipkdnqnfc vpcyekqfam qcvqckkait tggvtyreqp
      181 whkecfvcta ckkqlsgqrf tsrdefaycl scfcnlyakk cagctnpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpecgkdi
//
LOCUS       XP_041324505             279 aa            linear   VRT 06-MAY-2021
DEFINITION  four and a half LIM domains protein 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324505
VERSION     XP_041324505.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468571.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..279
                     /product="four and a half LIM domains protein 2 isoform
                     X2"
                     /calculated_mol_wt=32259
     Region          <5..33
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Region          36..97
                     /region_name="LIM1_FHL2"
                     /note="The first LIM domain of Four and a half LIM domains
                     protein 2 (FHL2); cd09422"
                     /db_xref="CDD:188806"
     Site            order(40,43,62,65,68,71,89,92)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188806"
     Region          101..157
                     /region_name="LIM2_FHL2"
                     /note="The second LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09426"
                     /db_xref="CDD:188810"
     Site            order(101,104,123,126,129,132,150,153)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188810"
     Region          162..218
                     /region_name="LIM"
                     /note="LIM is a small protein-protein interaction domain,
                     containing two zinc fingers; cl02475"
                     /db_xref="CDD:413332"
     Site            order(162,165,182,185,188,191,209,212)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259829"
     Region          221..278
                     /region_name="LIM4_FHL2"
                     /note="The fourth LIM domain of Four and a half LIM
                     domains protein 2 (FHL2); cd09433"
                     /db_xref="CDD:188817"
     Site            order(221,224,245,248,251,254,272,275)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188817"
     CDS             1..279
                     /gene="FHL2"
                     /coded_by="XM_041468571.1:87..926"
                     /db_xref="GeneID:121354159"
ORIGIN      
        1 mterfdchyc eeslfgkkyi lkedspycvk cyeslysntc eeckkpigad ckdlsykdrh
       61 whetcfhcfq cknslvdkpf aakeehllct dcysneyssk cneckktimp gtrkmeykgn
      121 swhetcficy rcqqpigtks fipkdnqnfc vpcyekqfam qcvqckkait tggvtyreqp
      181 whkecfvcta ckkqlsgqrf tsrdefaycl scfcnlyakk cagctnpisg lggtkyisfe
      241 erqwhndcfn ckkcslslvg rgflterddi lcpecgkdi
//
LOCUS       XP_041324507            1253 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic FMR1-interacting protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324507
VERSION     XP_041324507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1253
                     /product="cytoplasmic FMR1-interacting protein 1 isoform
                     X1"
                     /calculated_mol_wt=145328
     Region          404..1222
                     /region_name="FragX_IP"
                     /note="Cytoplasmic Fragile-X interacting family;
                     pfam05994"
                     /db_xref="CDD:461799"
     CDS             1..1253
                     /gene="CYFIP1"
                     /coded_by="XM_041468573.1:180..3941"
                     /db_xref="GeneID:121354161"
ORIGIN      
        1 mtaqvtleda lsnvdlleel plpdqqpcie pppssllyqp nfntnfedrn afvtgiaryi
       61 eqatvhssmn emleegqeya imlytwrscs raipqvkcne qpnrveiyek tvevlepevt
      121 klmnfmyfqr naierfcgev rrlchaerrk dfvseaylit lgkfinmfav ldelknmkcs
      181 vkndhsaykr aaqflrkmad pqsiqesqnl smflanhnki tqslqqqlev ivgyeellad
      241 ivnlcvdyye nkmyltpsek hmllkvmgfg lylmdgsvsn iykldakkri nlakidkyfk
      301 qlqvvplfgd mqielaryik tsahyeenks rwtctsssss pqyniceqmi qiredhmrfi
      361 selarysnse vvtgsgrqea qktdaeyrkl fdlslqglql lsqwsahvme vyswklvhpt
      421 dkysnkdcpd naeeyeratr ynytseekfa lveviamikg lqvlmgrmes vfnhairhti
      481 yaalqdfaqv tlreplrqai kkkknviqsv lqairktvcd weaghepfnd palrgekdpk
      541 sgfdikvprr avgpsstqly mvrtmlesli adksgskktl rsslegptil diekfhresf
      601 fythlinfse tlqqccdlsq lwfrefflel tmgrriqfpi emsmpwiltd hiletkeasm
      661 meyvlysldl yndsahyalt kfkkqflyde ieaevnlcfd qfvykladqi fayykamags
      721 llldkrlrse cknqgatiql lqsnryetll kqrhvqllgr sidlnrlitq risaamyrsm
      781 elaigrfese dltsiveldg lieinkmthk llsrymtlds fdamfreanh nvsapygrit
      841 lhvfwelnyd flpnycyngs tnrfvrtvlp fsqefqrdkq pnaqpqylyg skalnlayss
      901 iysnyrnfvg pphfkvicrl lgyqgiavvm eellkvvksl lqgtilqyvk tlmevmpkic
      961 rlprheygsp gileffhhql kdiveyaelk tvcfqnlrev gnavlfclli eqslsleevc
     1021 dllhaapfqn ilprvhvkeg erldakmkrl eskyaslhlv plierlgtpq qiaiaregdl
     1081 ltkerlccgl smfeviltri rsflddpiwr gplpsngvmh vdecvefhrl wsamqfvyci
     1141 pvgmheftve qcfgdglhwa gcmiivllgq qrrfdvldfc yhllkvqkhd gkdeviknvp
     1201 lkkmverirk fqilndeiia ildkylksgd gestpvehvr cfqppihqsl asn
//
LOCUS       XP_041324508            1253 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic FMR1-interacting protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324508
VERSION     XP_041324508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1253
                     /product="cytoplasmic FMR1-interacting protein 1 isoform
                     X1"
                     /calculated_mol_wt=145328
     Region          404..1222
                     /region_name="FragX_IP"
                     /note="Cytoplasmic Fragile-X interacting family;
                     pfam05994"
                     /db_xref="CDD:461799"
     CDS             1..1253
                     /gene="CYFIP1"
                     /coded_by="XM_041468574.1:244..4005"
                     /db_xref="GeneID:121354161"
ORIGIN      
        1 mtaqvtleda lsnvdlleel plpdqqpcie pppssllyqp nfntnfedrn afvtgiaryi
       61 eqatvhssmn emleegqeya imlytwrscs raipqvkcne qpnrveiyek tvevlepevt
      121 klmnfmyfqr naierfcgev rrlchaerrk dfvseaylit lgkfinmfav ldelknmkcs
      181 vkndhsaykr aaqflrkmad pqsiqesqnl smflanhnki tqslqqqlev ivgyeellad
      241 ivnlcvdyye nkmyltpsek hmllkvmgfg lylmdgsvsn iykldakkri nlakidkyfk
      301 qlqvvplfgd mqielaryik tsahyeenks rwtctsssss pqyniceqmi qiredhmrfi
      361 selarysnse vvtgsgrqea qktdaeyrkl fdlslqglql lsqwsahvme vyswklvhpt
      421 dkysnkdcpd naeeyeratr ynytseekfa lveviamikg lqvlmgrmes vfnhairhti
      481 yaalqdfaqv tlreplrqai kkkknviqsv lqairktvcd weaghepfnd palrgekdpk
      541 sgfdikvprr avgpsstqly mvrtmlesli adksgskktl rsslegptil diekfhresf
      601 fythlinfse tlqqccdlsq lwfrefflel tmgrriqfpi emsmpwiltd hiletkeasm
      661 meyvlysldl yndsahyalt kfkkqflyde ieaevnlcfd qfvykladqi fayykamags
      721 llldkrlrse cknqgatiql lqsnryetll kqrhvqllgr sidlnrlitq risaamyrsm
      781 elaigrfese dltsiveldg lieinkmthk llsrymtlds fdamfreanh nvsapygrit
      841 lhvfwelnyd flpnycyngs tnrfvrtvlp fsqefqrdkq pnaqpqylyg skalnlayss
      901 iysnyrnfvg pphfkvicrl lgyqgiavvm eellkvvksl lqgtilqyvk tlmevmpkic
      961 rlprheygsp gileffhhql kdiveyaelk tvcfqnlrev gnavlfclli eqslsleevc
     1021 dllhaapfqn ilprvhvkeg erldakmkrl eskyaslhlv plierlgtpq qiaiaregdl
     1081 ltkerlccgl smfeviltri rsflddpiwr gplpsngvmh vdecvefhrl wsamqfvyci
     1141 pvgmheftve qcfgdglhwa gcmiivllgq qrrfdvldfc yhllkvqkhd gkdeviknvp
     1201 lkkmverirk fqilndeiia ildkylksgd gestpvehvr cfqppihqsl asn
//
LOCUS       XP_041324509            1253 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic FMR1-interacting protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324509
VERSION     XP_041324509.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468575.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1253
                     /product="cytoplasmic FMR1-interacting protein 1 isoform
                     X1"
                     /calculated_mol_wt=145328
     Region          404..1222
                     /region_name="FragX_IP"
                     /note="Cytoplasmic Fragile-X interacting family;
                     pfam05994"
                     /db_xref="CDD:461799"
     CDS             1..1253
                     /gene="CYFIP1"
                     /coded_by="XM_041468575.1:29..3790"
                     /db_xref="GeneID:121354161"
ORIGIN      
        1 mtaqvtleda lsnvdlleel plpdqqpcie pppssllyqp nfntnfedrn afvtgiaryi
       61 eqatvhssmn emleegqeya imlytwrscs raipqvkcne qpnrveiyek tvevlepevt
      121 klmnfmyfqr naierfcgev rrlchaerrk dfvseaylit lgkfinmfav ldelknmkcs
      181 vkndhsaykr aaqflrkmad pqsiqesqnl smflanhnki tqslqqqlev ivgyeellad
      241 ivnlcvdyye nkmyltpsek hmllkvmgfg lylmdgsvsn iykldakkri nlakidkyfk
      301 qlqvvplfgd mqielaryik tsahyeenks rwtctsssss pqyniceqmi qiredhmrfi
      361 selarysnse vvtgsgrqea qktdaeyrkl fdlslqglql lsqwsahvme vyswklvhpt
      421 dkysnkdcpd naeeyeratr ynytseekfa lveviamikg lqvlmgrmes vfnhairhti
      481 yaalqdfaqv tlreplrqai kkkknviqsv lqairktvcd weaghepfnd palrgekdpk
      541 sgfdikvprr avgpsstqly mvrtmlesli adksgskktl rsslegptil diekfhresf
      601 fythlinfse tlqqccdlsq lwfrefflel tmgrriqfpi emsmpwiltd hiletkeasm
      661 meyvlysldl yndsahyalt kfkkqflyde ieaevnlcfd qfvykladqi fayykamags
      721 llldkrlrse cknqgatiql lqsnryetll kqrhvqllgr sidlnrlitq risaamyrsm
      781 elaigrfese dltsiveldg lieinkmthk llsrymtlds fdamfreanh nvsapygrit
      841 lhvfwelnyd flpnycyngs tnrfvrtvlp fsqefqrdkq pnaqpqylyg skalnlayss
      901 iysnyrnfvg pphfkvicrl lgyqgiavvm eellkvvksl lqgtilqyvk tlmevmpkic
      961 rlprheygsp gileffhhql kdiveyaelk tvcfqnlrev gnavlfclli eqslsleevc
     1021 dllhaapfqn ilprvhvkeg erldakmkrl eskyaslhlv plierlgtpq qiaiaregdl
     1081 ltkerlccgl smfeviltri rsflddpiwr gplpsngvmh vdecvefhrl wsamqfvyci
     1141 pvgmheftve qcfgdglhwa gcmiivllgq qrrfdvldfc yhllkvqkhd gkdeviknvp
     1201 lkkmverirk fqilndeiia ildkylksgd gestpvehvr cfqppihqsl asn
//
LOCUS       XP_041324510            1253 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic FMR1-interacting protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324510
VERSION     XP_041324510.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468576.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1253
                     /product="cytoplasmic FMR1-interacting protein 1 isoform
                     X1"
                     /calculated_mol_wt=145328
     Region          404..1222
                     /region_name="FragX_IP"
                     /note="Cytoplasmic Fragile-X interacting family;
                     pfam05994"
                     /db_xref="CDD:461799"
     CDS             1..1253
                     /gene="CYFIP1"
                     /coded_by="XM_041468576.1:125..3886"
                     /db_xref="GeneID:121354161"
ORIGIN      
        1 mtaqvtleda lsnvdlleel plpdqqpcie pppssllyqp nfntnfedrn afvtgiaryi
       61 eqatvhssmn emleegqeya imlytwrscs raipqvkcne qpnrveiyek tvevlepevt
      121 klmnfmyfqr naierfcgev rrlchaerrk dfvseaylit lgkfinmfav ldelknmkcs
      181 vkndhsaykr aaqflrkmad pqsiqesqnl smflanhnki tqslqqqlev ivgyeellad
      241 ivnlcvdyye nkmyltpsek hmllkvmgfg lylmdgsvsn iykldakkri nlakidkyfk
      301 qlqvvplfgd mqielaryik tsahyeenks rwtctsssss pqyniceqmi qiredhmrfi
      361 selarysnse vvtgsgrqea qktdaeyrkl fdlslqglql lsqwsahvme vyswklvhpt
      421 dkysnkdcpd naeeyeratr ynytseekfa lveviamikg lqvlmgrmes vfnhairhti
      481 yaalqdfaqv tlreplrqai kkkknviqsv lqairktvcd weaghepfnd palrgekdpk
      541 sgfdikvprr avgpsstqly mvrtmlesli adksgskktl rsslegptil diekfhresf
      601 fythlinfse tlqqccdlsq lwfrefflel tmgrriqfpi emsmpwiltd hiletkeasm
      661 meyvlysldl yndsahyalt kfkkqflyde ieaevnlcfd qfvykladqi fayykamags
      721 llldkrlrse cknqgatiql lqsnryetll kqrhvqllgr sidlnrlitq risaamyrsm
      781 elaigrfese dltsiveldg lieinkmthk llsrymtlds fdamfreanh nvsapygrit
      841 lhvfwelnyd flpnycyngs tnrfvrtvlp fsqefqrdkq pnaqpqylyg skalnlayss
      901 iysnyrnfvg pphfkvicrl lgyqgiavvm eellkvvksl lqgtilqyvk tlmevmpkic
      961 rlprheygsp gileffhhql kdiveyaelk tvcfqnlrev gnavlfclli eqslsleevc
     1021 dllhaapfqn ilprvhvkeg erldakmkrl eskyaslhlv plierlgtpq qiaiaregdl
     1081 ltkerlccgl smfeviltri rsflddpiwr gplpsngvmh vdecvefhrl wsamqfvyci
     1141 pvgmheftve qcfgdglhwa gcmiivllgq qrrfdvldfc yhllkvqkhd gkdeviknvp
     1201 lkkmverirk fqilndeiia ildkylksgd gestpvehvr cfqppihqsl asn
//
LOCUS       XP_041324511             693 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic FMR1-interacting protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324511
VERSION     XP_041324511.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468577.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..693
                     /product="cytoplasmic FMR1-interacting protein 1 isoform
                     X2"
                     /calculated_mol_wt=80478
     Region          <1..662
                     /region_name="FragX_IP"
                     /note="Cytoplasmic Fragile-X interacting family;
                     pfam05994"
                     /db_xref="CDD:461799"
     CDS             1..693
                     /gene="CYFIP1"
                     /coded_by="XM_041468577.1:144..2225"
                     /db_xref="GeneID:121354161"
ORIGIN      
        1 mvrtmlesli adksgskktl rsslegptil diekfhresf fythlinfse tlqqccdlsq
       61 lwfrefflel tmgrriqfpi emsmpwiltd hiletkeasm meyvlysldl yndsahyalt
      121 kfkkqflyde ieaevnlcfd qfvykladqi fayykamags llldkrlrse cknqgatiql
      181 lqsnryetll kqrhvqllgr sidlnrlitq risaamyrsm elaigrfese dltsiveldg
      241 lieinkmthk llsrymtlds fdamfreanh nvsapygrit lhvfwelnyd flpnycyngs
      301 tnrfvrtvlp fsqefqrdkq pnaqpqylyg skalnlayss iysnyrnfvg pphfkvicrl
      361 lgyqgiavvm eellkvvksl lqgtilqyvk tlmevmpkic rlprheygsp gileffhhql
      421 kdiveyaelk tvcfqnlrev gnavlfclli eqslsleevc dllhaapfqn ilprvhvkeg
      481 erldakmkrl eskyaslhlv plierlgtpq qiaiaregdl ltkerlccgl smfeviltri
      541 rsflddpiwr gplpsngvmh vdecvefhrl wsamqfvyci pvgmheftve qcfgdglhwa
      601 gcmiivllgq qrrfdvldfc yhllkvqkhd gkdeviknvp lkkmverirk fqilndeiia
      661 ildkylksgd gestpvehvr cfqppihqsl asn
//
LOCUS       XP_041324512            1063 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-tubulin complex component 5 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324512
VERSION     XP_041324512.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468578.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1063
                     /product="gamma-tubulin complex component 5 isoform X1"
                     /calculated_mol_wt=122467
     Region          18..113
                     /region_name="GCP5_NTD"
                     /note="N-terminal domain of gamma-tubulin complex
                     component 5 (GCP-5) and similar proteins; cd22572"
                     /db_xref="CDD:439339"
     Region          314..624
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          759..1056
                     /region_name="GCP_C_terminal"
                     /note="Gamma tubulin complex component C-terminal;
                     pfam04130"
                     /db_xref="CDD:461187"
     CDS             1..1063
                     /gene="TUBGCP5"
                     /coded_by="XM_041468578.1:30..3221"
                     /db_xref="GeneID:121354162"
ORIGIN      
        1 maappaspgp rgrfeqeqdr avralvrcvt slpeeelgge rfqaalnfaw snfrfhrfld
       61 vnshkverti egiheklvih sdlgkaaswk rltekflnlp lpsteetktd thysilslll
      121 clsdspsntt yvekprvkev dsflndlctf prrcfectfs pfqeceyeev isnttnykke
      181 eefdwgkylm egeeiyfgpg vdtpdwsges eeeedtqpls redsgiqvdr tpledqdpnk
      241 ktvphaswkv gepdarswle qhvvpqywtg raprfshslh lhsnlaavwd hhlytsdply
      301 vpeertlvte tqviretlwl lsgvkklfif qlndgkvtvr ndiivthlth nclrsvleqi
      361 aaygqvvfrl qkfidevmgh spesimhgtv stpkktteap frtyqafmwa lykyfisfke
      421 elteiekcii nkdktvtlsi vidklsprla qlkvlhkvfs tgvaevppdt rnvvrashll
      481 ntlykailey dsvgeaseqt vsllfslwve tvrpylqtvd ewivhgnlfd pakefiiqrn
      541 knvpvnhrdf wyatytlysv sekteneekm sdnasassgs dqapssrqht mvsflkpvlk
      601 qiimagksmq llknlqckdg spqqaasrda erkslytlfl esvqsrlrhg eesvpdiite
      661 qqatkqslik mqsiaerhle lddvhdplla infarlyleq sdfhekftgg dvcvdrsses
      721 vtcqtfeltl rsclyphidk qyleccgnlm qtlkkdyrlv eylqamrnff lleagdtmyd
      781 fytsifdkir eketwqnvaf lnvhlqeavg qrypedsarl sisfesvdta kkklpvhtld
      841 gltlsykvpw pvdivislec qkiynqvfll llqikwakys ldvlrfdelv saaensqvke
      901 eqgtlpvfgp qkesikqqih rmfllrvklm hfvnslhnyi mtrilhstgl efqhqveeak
      961 dldqlikihy rylstihdrc llrekvsfvk eaimkvlnlv lmfadrwqag lgawkmesie
     1021 kmesdfknch mflvtvlnka vcrgsfphle slalslmagm eqs
//
LOCUS       XP_041324513            1026 aa            linear   VRT 06-MAY-2021
DEFINITION  gamma-tubulin complex component 5 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324513
VERSION     XP_041324513.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468579.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1026
                     /product="gamma-tubulin complex component 5 isoform X2"
                     /calculated_mol_wt=118036
     Region          18..113
                     /region_name="GCP5_NTD"
                     /note="N-terminal domain of gamma-tubulin complex
                     component 5 (GCP-5) and similar proteins; cd22572"
                     /db_xref="CDD:439339"
     Region          277..587
                     /region_name="GCP_N_terminal"
                     /note="Gamma tubulin complex component N-terminal;
                     pfam17681"
                     /db_xref="CDD:465456"
     Region          722..1019
                     /region_name="GCP_C_terminal"
                     /note="Gamma tubulin complex component C-terminal;
                     pfam04130"
                     /db_xref="CDD:461187"
     CDS             1..1026
                     /gene="TUBGCP5"
                     /coded_by="XM_041468579.1:30..3110"
                     /db_xref="GeneID:121354162"
ORIGIN      
        1 maappaspgp rgrfeqeqdr avralvrcvt slpeeelgge rfqaalnfaw snfrfhrfld
       61 vnshkverti egiheklvih sdlgkaaswk rltekflnlp lpsteetktd thysilslll
      121 clsdspsntt yvekprvkev ekeeefdwgk ylmegeeiyf gpgvdtpdws geseeeedtq
      181 plsredsgiq vdrtpledqd pnkktvphas wkvgepdars wleqhvvpqy wtgraprfsh
      241 slhlhsnlaa vwdhhlytsd plyvpeertl vtetqviret lwllsgvkkl fifqlndgkv
      301 tvrndiivth lthnclrsvl eqiaaygqvv frlqkfidev mghspesimh gtvstpkktt
      361 eapfrtyqaf mwalykyfis fkeelteiek ciinkdktvt lsividklsp rlaqlkvlhk
      421 vfstgvaevp pdtrnvvras hllntlykai leydsvgeas eqtvsllfsl wvetvrpylq
      481 tvdewivhgn lfdpakefii qrnknvpvnh rdfwyatytl ysvsektene ekmsdnasas
      541 sgsdqapssr qhtmvsflkp vlkqiimagk smqllknlqc kdgspqqaas rdaerkslyt
      601 lflesvqsrl rhgeesvpdi iteqqatkqs likmqsiaer hlelddvhdp llainfarly
      661 leqsdfhekf tggdvcvdrs sesvtcqtfe ltlrsclyph idkqyleccg nlmqtlkkdy
      721 rlveylqamr nfflleagdt mydfytsifd kireketwqn vaflnvhlqe avgqrypeds
      781 arlsisfesv dtakkklpvh tldgltlsyk vpwpvdivis lecqkiynqv fllllqikwa
      841 kysldvlrfd elvsaaensq vkeeqgtlpv fgpqkesikq qihrmfllrv klmhfvnslh
      901 nyimtrilhs tglefqhqve eakdldqlik ihyrylstih drcllrekvs fvkeaimkvl
      961 nlvlmfadrw qaglgawkme siekmesdfk nchmflvtvl nkavcrgsfp hleslalslm
     1021 agmeqs
//
LOCUS       XP_041324514             361 aa            linear   VRT 06-MAY-2021
DEFINITION  magnesium transporter NIPA2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324514
VERSION     XP_041324514.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468580.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="magnesium transporter NIPA2"
                     /calculated_mol_wt=38887
     Region          8..302
                     /region_name="Mg_trans_NIPA"
                     /note="Magnesium transporter NIPA; pfam05653"
                     /db_xref="CDD:398984"
     CDS             1..361
                     /gene="NIPA2"
                     /coded_by="XM_041468580.1:429..1514"
                     /db_xref="GeneID:121354163"
ORIGIN      
        1 msqtrgkydf ciglvlamss sifiggsfil kkkgllrlar kgsmragqgg haylkewlww
       61 agllsmgage vanfaayafa patlvtplga lsvlvsails sfflneklnl hgkigcllsi
      121 lgstvmviha pqeeevetld emshklgdpg fvvfatlvvi vslilicvvg prhgqtnilv
      181 yiticsviga lsvscvkglg iaikelfagk pvlkhplswi lllsltvcvs tqinylnral
      241 difntsivtp iyyvifttsv ltcsailfke wqhmaaddii gtfsgfltii vgifllhafk
      301 dvnftlanlp lslrkddraa ngtllstyds fhddeessac lgemqstesl sarrngslsp
      361 f
//
LOCUS       XP_041324515             223 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III domain-containing protein 9-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324515
VERSION     XP_041324515.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468581.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..223
                     /product="fibronectin type III domain-containing protein
                     9-like"
                     /calculated_mol_wt=25187
     Region          2..82
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     CDS             1..223
                     /gene="LOC121354164"
                     /coded_by="XM_041468581.1:1..672"
                     /db_xref="GeneID:121354164"
ORIGIN      
        1 mgitiqnitg ntamviwpkm ascvdsfysi myhpnwnsml ssysrksfqr eervpttrss
       61 fvvenltplt tyimcvtcqs anpssdqcrv fntlerdpas asntkkelal giwltssvll
      121 liiaavllyg clhllcrrrh erlqernrts kqereepwtk svahtseefs rqsqqtqdte
      181 ekhshsiqla tiienpsvcn epimpssksq ervpvtgqcs ain
//
LOCUS       XP_041324516             538 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-1,3-mannosyl-glycoprotein
            4-beta-N-acetylglucosaminyltransferase A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324516
VERSION     XP_041324516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..538
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase A isoform X1"
                     /calculated_mol_wt=61769
     Region          106..383
                     /region_name="Glyco_transf_54"
                     /note="N-Acetylglucosaminyltransferase-IV (GnT-IV)
                     conserved region; pfam04666"
                     /db_xref="CDD:461384"
     Region          290..314
                     /region_name="putative TM2 helix"
                     /note="putative TM2 helix [structural motif]"
                     /db_xref="CDD:409189"
     CDS             1..538
                     /gene="MGAT4A"
                     /coded_by="XM_041468582.1:456..2072"
                     /db_xref="GeneID:121354166"
ORIGIN      
        1 makwerkspv lhnakepprl gsanflmave iekeekliay qrefhalker lriaehrtlq
       61 rsselnaile qfrravaetn gsknamnnfs detlkllkel tsrkslqvpn iyyhlphllk
      121 negslqpsvq vglgrtgvsi vmgiptvkrk vksyltetlh slidklspee kldcvmvvfi
      181 getdldyvns vvaslerefs teinsglvev iappatyypd ltnlketfgd skervrwrtk
      241 qnldycflmm yaqkkgvyyi qleddivvkq nyfstiknfa lqlasedwmi lefsqlgfig
      301 kmfqspditl ivefifmfyk ekpidwlldh ilwvkvcnpe kdakhcdrqk snlrirfrps
      361 lfqhvglhss lagkiqkltd kdflkpllhk ihvnppaevs tslkvyqght lektyvgedf
      421 fwavtpvagd yilfkfdkpv nverylfhsg npehpgdill nttvevlpfq seelvlsket
      481 kdkrledgyf rigkfengva egtvdpslnp issfrlsviq nsavwailne ihikkitn
//
LOCUS       XP_041324517             538 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-1,3-mannosyl-glycoprotein
            4-beta-N-acetylglucosaminyltransferase A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324517
VERSION     XP_041324517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468583.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..538
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase A isoform X1"
                     /calculated_mol_wt=61769
     Region          106..383
                     /region_name="Glyco_transf_54"
                     /note="N-Acetylglucosaminyltransferase-IV (GnT-IV)
                     conserved region; pfam04666"
                     /db_xref="CDD:461384"
     Region          290..314
                     /region_name="putative TM2 helix"
                     /note="putative TM2 helix [structural motif]"
                     /db_xref="CDD:409189"
     CDS             1..538
                     /gene="MGAT4A"
                     /coded_by="XM_041468583.1:583..2199"
                     /db_xref="GeneID:121354166"
ORIGIN      
        1 makwerkspv lhnakepprl gsanflmave iekeekliay qrefhalker lriaehrtlq
       61 rsselnaile qfrravaetn gsknamnnfs detlkllkel tsrkslqvpn iyyhlphllk
      121 negslqpsvq vglgrtgvsi vmgiptvkrk vksyltetlh slidklspee kldcvmvvfi
      181 getdldyvns vvaslerefs teinsglvev iappatyypd ltnlketfgd skervrwrtk
      241 qnldycflmm yaqkkgvyyi qleddivvkq nyfstiknfa lqlasedwmi lefsqlgfig
      301 kmfqspditl ivefifmfyk ekpidwlldh ilwvkvcnpe kdakhcdrqk snlrirfrps
      361 lfqhvglhss lagkiqkltd kdflkpllhk ihvnppaevs tslkvyqght lektyvgedf
      421 fwavtpvagd yilfkfdkpv nverylfhsg npehpgdill nttvevlpfq seelvlsket
      481 kdkrledgyf rigkfengva egtvdpslnp issfrlsviq nsavwailne ihikkitn
//
LOCUS       XP_041324518             535 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-1,3-mannosyl-glycoprotein
            4-beta-N-acetylglucosaminyltransferase A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324518
VERSION     XP_041324518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..535
                     /product="alpha-1,3-mannosyl-glycoprotein
                     4-beta-N-acetylglucosaminyltransferase A isoform X2"
                     /calculated_mol_wt=61437
     Region          103..380
                     /region_name="Glyco_transf_54"
                     /note="N-Acetylglucosaminyltransferase-IV (GnT-IV)
                     conserved region; pfam04666"
                     /db_xref="CDD:461384"
     Region          287..311
                     /region_name="putative TM2 helix"
                     /note="putative TM2 helix [structural motif]"
                     /db_xref="CDD:409189"
     CDS             1..535
                     /gene="MGAT4A"
                     /coded_by="XM_041468584.1:379..1986"
                     /db_xref="GeneID:121354166"
ORIGIN      
        1 mrlrngtvat vlvfittfls lswytawqng kekliayqre fhalkerlri aehrtlqrss
       61 elnaileqfr ravaetngsk namnnfsdet lkllkeltsr kslqvpniyy hlphllkneg
      121 slqpsvqvgl grtgvsivmg iptvkrkvks yltetlhsli dklspeekld cvmvvfiget
      181 dldyvnsvva slerefstei nsglveviap patyypdltn lketfgdske rvrwrtkqnl
      241 dycflmmyaq kkgvyyiqle ddivvkqnyf stiknfalql asedwmilef sqlgfigkmf
      301 qspditlive fifmfykekp idwlldhilw vkvcnpekda khcdrqksnl rirfrpslfq
      361 hvglhsslag kiqkltdkdf lkpllhkihv nppaevstsl kvyqghtlek tyvgedffwa
      421 vtpvagdyil fkfdkpvnve rylfhsgnpe hpgdillntt vevlpfqsee lvlsketkdk
      481 rledgyfrig kfengvaegt vdpslnpiss frlsviqnsa vwailneihi kkitn
//
LOCUS       XP_041324520             315 aa            linear   VRT 06-MAY-2021
DEFINITION  protein unc-50 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324520
VERSION     XP_041324520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="protein unc-50 homolog"
                     /calculated_mol_wt=35669
     Region          90..311
                     /region_name="UNC-50"
                     /note="UNC-50 family; pfam05216"
                     /db_xref="CDD:461592"
     CDS             1..315
                     /gene="UNC50"
                     /coded_by="XM_041468586.1:1..948"
                     /db_xref="GeneID:121354167"
ORIGIN      
        1 mpgaaaasgg srkgrggsgk dperlrherc rkaagggrgg gagrgggraa grgsskmlpt
       61 tlvnsgsqgn gvlsrrdaar htagakryky lrrlfhfrqm dfefalwqml ylftspqrvy
      121 rnfhyrkqtk dqwarddpaf lvllsiwlcv stvgfgfvld mgffetikll lwvvfidcvg
      181 vglliatlmw fisnkylvkq qnrdydvewg yafdvhlnaf ypllvilhfi qlffinyvii
      241 sdsvigyfvg ntlwliaigy yiyvtflgys alpflkntai llypfallim lylislacgw
      301 nftkmlcsfy kyrvk
//
LOCUS       XP_041324521              75 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase assembly factor 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324521
VERSION     XP_041324521.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468587.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..75
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..75
                     /product="cytochrome c oxidase assembly factor 5"
                     /calculated_mol_wt=8675
     Region          12..72
                     /region_name="Pet191_N"
                     /note="Cytochrome c oxidase assembly protein PET191;
                     pfam10203"
                     /db_xref="CDD:402002"
     CDS             1..75
                     /gene="LOC121354168"
                     /coded_by="XM_041468587.1:272..499"
                     /db_xref="GeneID:121354168"
ORIGIN      
        1 mpkyyedkee dgracsgvre dlrqcllesp cvlqenkspk qclreghcrs lqvtffackr
       61 smldtrarfr grkgy
//
LOCUS       XP_041324522             502 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat domain-containing protein SOWAHC [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324522
VERSION     XP_041324522.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468588.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="ankyrin repeat domain-containing protein SOWAHC"
                     /calculated_mol_wt=53195
     Region          12..68
                     /region_name="CSB_WHD"
                     /note="winged-helix domain (WHD) found in cockayne
                     syndrome group B (CSB) and similar proteins; cd22254"
                     /db_xref="CDD:439329"
     Region          <54..>144
                     /region_name="PLN02226"
                     /note="2-oxoglutarate dehydrogenase E2 component"
                     /db_xref="CDD:177871"
     Region          259..287
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <291..398
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          291..327
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          329..361
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..502
                     /gene="SOWAHC"
                     /coded_by="XM_041468588.1:160..1668"
                     /db_xref="GeneID:121354169"
ORIGIN      
        1 maepaelqqe svvrflaarg grarnaelle hfrdwlnpad psrraaarhr fkelvnavat
       61 vrqepgtgvk yvhlrrryca peppaaaplt pgeqepaaen sakqpsppps pradaeetpp
      121 atgedagsrp qppgqrgepp rpspavaggq rrgsrrgppp grgeggggse etaiatgpgr
      181 ppatdeagaa egapgaaaqg ggrrslreaa rgsspqlkrg alpsggrgrd sdsasvasss
      241 aeeegsttgs valdplehaw mlsasdgrwe slegllscep allckrdfit gftvlhwaak
      301 hgrqellatl vnfaqrhglp vdinartsgg htalhiaamh ghaevvkllv gaydadvdir
      361 dysgrkaaqy lqqgtsgdmr nlvgaleeee eeegnagngs grwrlskvlp tnlmnyrlsh
      421 hhhgtgeeae gtdgaavpgk gkemsrkasg sgrmkprlnk irfrtqiihn tpsfrgdaee
      481 eeheekslks sfklrpksnv fg
//
LOCUS       XP_041324523             374 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S9, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324523
VERSION     XP_041324523.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468589.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="28S ribosomal protein S9, mitochondrial"
                     /calculated_mol_wt=42611
     Region          252..374
                     /region_name="Ribosomal_S9"
                     /note="Ribosomal protein S9/S16; pfam00380"
                     /db_xref="CDD:459791"
     CDS             1..374
                     /gene="MRPS9"
                     /coded_by="XM_041468589.1:50..1174"
                     /db_xref="GeneID:121354170"
ORIGIN      
        1 maaavgrvlr lclcrrwgag praqtlrlic tttavqrkna gasgpekyte afikkqieef
       61 nlgkrhlanm mgedpetftq edidraiayl fpsglfdkqa rplmkhptev fpeqrkiqwg
      121 edgrpfhflf ytgkqsyysl mhetyekfln vqkhqdqqta qglplqkekr nlagsrwltk
      181 ieleemllek vsdddysrfi qlleklvalp cadieekyiq kfskevpvqm lkvvieplqh
      241 dergvafstg egkrktatat avvydngtgk itvngidilh yfpvlqdreq llfpfqflgr
      301 igkhdmvctv sgggrsaqag airlasakal rsfvtekeve fmrqaglltv dprvkerkkp
      361 gqegprrkft wkkr
//
LOCUS       XP_041324524             587 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-18 receptor accessory protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324524
VERSION     XP_041324524.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468590.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="interleukin-18 receptor accessory protein"
                     /calculated_mol_wt=67070
     Region          54..161
                     /region_name="Ig_6"
                     /note="Immunoglobulin domain; pfam18452"
                     /db_xref="CDD:465773"
     Region          168..>225
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cd00096"
                     /db_xref="CDD:409353"
     Region          168..171
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          184..188
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          208..212
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          255..359
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          274..278
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          291..295
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          324..328
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..344
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          351..354
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          433..563
                     /region_name="TIR"
                     /note="TIR domain; pfam01582"
                     /db_xref="CDD:396246"
     CDS             1..587
                     /gene="LOC121354171"
                     /coded_by="XM_041468590.1:13..1776"
                     /db_xref="GeneID:121354171"
ORIGIN      
        1 miikenvsey qpklikkiml tlcwiltlfv sgvevteinl pgcshvephi wyraingeef
       61 vlqcalpdrd atniynnspl nqhrvkwfwh qkdketlksi eessnltfqg dalwfkpird
      121 sasgvyicri wgkipclkiv ldvqtkkaak csgydtnily llagrgnsit cpgtkcyshi
      181 kkpdvkwykd ghqikyrksr pslklkqnei ylnptydkda giyvcdytls dnitewtvrt
      241 avtveviakn tihppsllyp ngvvileaev gkplelecrv qfgfetvspm rvtwkrnnee
      301 ivneklnqet tvypkglkgh tllhvatlke vtekdlrssf tcfaensvgn ataviqlkrk
      361 krvlflyvlc saistifafv lctafiyqhw ieivltyrsc lvhnkstedg kefdafvsya
      421 klnpsesdsa liseekfale llpdmlenky gyklcilerd ilpggaytde vvtaikhsrr
      481 viiilspayv sgpsifelqa avncaledkg iklvlikfqd fqepetlppv vkkalrilpi
      541 vtwkssisaa phkkfwkymr yhmpmkttkr lenfslkgfs qrlfrlv
//
LOCUS       XP_041324525             362 aa            linear   VRT 06-MAY-2021
DEFINITION  protein XRP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324525
VERSION     XP_041324525.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468591.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="protein XRP2"
                     /calculated_mol_wt=40088
     Region          71..189
                     /region_name="TBCC"
                     /note="Tubulin binding cofactor C; pfam07986"
                     /db_xref="CDD:462331"
     CDS             1..362
                     /gene="RP2"
                     /coded_by="XM_041468591.1:36..1124"
                     /db_xref="GeneID:121354172"
ORIGIN      
        1 mgcffsrrrk paqggqpplq qpagagqdaa tgeqkapqys wdlrakidpk dytfsglkne
       61 tvgrlpgkva gqqfviqdce nckiyifdhs atitiddcvn cqiflgpikg svffrdckdc
      121 kcvvacqqfr ardcrklevf lccatqpiie sstgmkfgcf qyyypelalq fkdaglsifn
      181 ntwsnihdft pvsgennwgl lpetavvqdy vplpsseelk avrvstdatk siipitrgrr
      241 qknsdescla vffagdytta narklidemt skgfqlvqtk evlmkaedah rvfqqsalef
      301 ipllekgpvv alefngdgav eqcrstvnev fsgtkvfvse skasasqdvd nfynfadmqm
      361 gm
//
LOCUS       XP_041324526            1518 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase VA [Pyrgilauda ruficollis].
ACCESSION   XP_041324526
VERSION     XP_041324526.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468592.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1518
                     /product="phospholipid-transporting ATPase VA"
                     /calculated_mol_wt=170610
     Region          60..1184
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(426..428,739,763..765,839,886..888,1000,1003,1006,
                     1026,1029)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1518
                     /gene="ATP10A"
                     /coded_by="XM_041468592.1:594..5150"
                     /db_xref="GeneID:121354173"
ORIGIN      
        1 msqgtaggeg apqvlpegke rqrkrrrrkk kesktrlvrs slllpeaepe kskgtvlacn
       61 rlkttkytal sflpknlfeq fhrlanvyfv fiallnfvpa vnafqpelal apvlfilavt
      121 aikdlwedys ryrsdkeinh meclvysrte kkyisrywke vkvgdfvqlr cneiipadil
      181 llsssdpdgl chietanldg etnlkqrqvv rrfleldsef dplkftsvie cekpnndlsr
      241 frgyiihksg kkdglfkenl llrgctirnt eevagiviya ghetkallnn ngprykrskl
      301 erqmnadvlw cvlillimcl fsaighglwv wqygekkkpi fdvpgpdgky lspvlaavyl
      361 fltmiivfqv lipislyvsi eivkicqvyf ihqdkdlyde etdsqlqcra lnitedlgqv
      421 qfifsdktgt ltenkmvfrr ctvsgieysh ddnakrlamy qepdseeeea apkggtlsqr
      481 dsicshqslk vihrsqstkt hrrtgsraea krasilskht afsspmekdi tpdprllekv
      541 necakhlevm rsheqplshl spelcdvfdf fialticntv vvtapnqprq kvrdrfelks
      601 pvktiedfir rftpsrltsg snssssssla tsksmhrfgl stlsststds tllkleekla
      661 ysaqmnnngy ssqqgrmavg gapeegelry eaespdeaal vyaarayncs lvgrlsdqvs
      721 velphlgtls fevlhtlgfd svrkrmsvvv rhpltdeinv ytkgadsvvm dlllpcssdd
      781 prgkhqkkir sktqnylnly avdglrtlci akrvlskeey gcwlkthlea essienreel
      841 lfqsalriek nlhllgatgi edrlqdgvpe tiaslrkagl qiwvltgdkq etavniayac
      901 klldhdeeii tlnaespetc avlleqclqc veskfsnnti dgatgnmtvg ftplyppsss
      961 vlsslglvid grtlayalep aledkflala krcrsvlccr stplqksmvv klvrdklkam
     1021 tlaigdgand vsmiqvadvg vgisgqegmq avmasdfaip rfrhleklll vhghwcysrl
     1081 anmvlyffyk namfvallfw yqfycgfsgs smidqwylif fnlffsslpq litgvldkdv
     1141 paevliavpq lyksgqnmee yqphmfwmnm idamyqslvc ffipyftyyd sevdifswgt
     1201 pittialfti ilhlaietkt wtflhwssci fsivlfffva lvynascpvc hppsnpywtm
     1261 erlmgdpmfy ftciispvva llprflyrtl qgtlfptqlq lgrqlsklsp etrtqlltkl
     1321 nvketmcqtr lfadsfspsl asnasdcyka dnqsaplpas pqtresllre dtkadhkrdq
     1381 tvaaspqgav lyeenklpss asglegsvgf hevqcgtsev eslpvgttfp wssgvdqadf
     1441 sllkwitstp lfshvgtvlq vsssslqnet qdsmcvlgss lhvdfkglke essnnlqdkm
     1501 kgnptdhckn dnsettfl
//
LOCUS       XP_041324528            1609 aa            linear   VRT 06-MAY-2021
DEFINITION  iporin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324528
VERSION     XP_041324528.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468594.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1609
                     /product="iporin isoform X1"
                     /calculated_mol_wt=175857
     Region          1030..1187
                     /region_name="RUN_RUSC2"
                     /note="RUN domain found in RUN and SH3 domain-containing
                     protein 2 (RUSC2) and similar proteins; cd17702"
                     /db_xref="CDD:439064"
     Region          1551..1602
                     /region_name="SH3_RUSC2"
                     /note="Src homology 3 domain of RUN and SH3
                     domain-containing protein 2; cd11957"
                     /db_xref="CDD:212890"
     Site            order(1556,1558,1561,1565,1583..1584,1597,1599..1600)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212890"
     CDS             1..1609
                     /gene="RUSC2"
                     /coded_by="XM_041468594.1:429..5258"
                     /db_xref="GeneID:121354177"
ORIGIN      
        1 mdsppkltge tlivhhiplv hcqvpdrqcc svskrtnpfc qpelsitrts alpdrdlsqt
       61 dslvyssflq tsetsaeasd hkerkardli vpsvskrhnp fllsegedls ifgddlgqks
      121 fhlhnslvdg kppfnlqdla lppfhlhdsn hivkswnmas rsgvvdgqed klssddiqkr
      181 nnanrchqas ermeldecsc hrgsssnfsf dsgdqewnqn mgeplrnqdt lhrtcscsss
      241 eiqhcrcyss ssqsevidqq mgyisdsscn ssdgvlvnfs alynkmngqp qsnlnsanls
      301 cdssfcshsd tgafyldlhs spteskmsce shnpessgkv cgcqhssspv ldancnsyhl
      361 hcepctsess dltacfqsqa rlvvatqnyy klvtcdlssq sspspagssi tscsedqtkg
      421 spaqpteyyl frrpdlrqeg nvecseeepk gessqnmieg qvyvnvsppn lntsrqrsrs
      481 ydqnldrspg srlgslermv scpvklsesp aipiqssppk rvtsfaelak grkkngtspp
      541 hrssgdssle fspipetqrd cptfleerar rsqslppmpf ihglnrsceg fclnhafgds
      601 qalcstkdsv ssekvpsghg ageqaslsll teadasfssg sasghgqkdv raradgggsd
      661 skpvvryskd qrpttlpiqp fvfqhhfskp pkaralhshf asslsqlysl ssnrpasqqi
      721 sssqssalat saeqaavags qahgtlvtqr sadgaasrgd ggikkpgpet trpsplgsys
      781 pvrcnvpffq svdsssspts eraedsqppr srscpisanl lpmrsspavs amqpskatka
      841 dtlrqkenpk lipkkeaple pspplseyrl hsgslpplsv ggmsmsrvgg hadshwrsgs
      901 etsssgplss mgirpvnanh lspqalkwre yrrrnplgld rvsglpslag sldrrqqepr
      961 lnrgnpifel pgalstshfh cklngqsmrq lqltyndffp dyfslaekpp aefclspdgn
     1021 tesisidllq kkglvkaint avdlivahfg tsrdpgvkak lgnssvspnv ghlilkylcp
     1081 avrdilsdgl kayvldmiig qrrnipwsvv eastqlgpst kllhslyski sqyteltnht
     1141 mrfnafifgl lnirslefwf nhlynhedii lahyqpvgfl clshsvcqpl feelllllqp
     1201 lsllpfnldl lfehhlmqmg keqqqqkell rvkqdlllsv hstlqlmrtr gssedpdgcs
     1261 tapeacqgga rdgdispghs pqqavsekrv kgvgascgeg dreeeqskmr estwegkkdk
     1321 qagwwyqlmq tsqiyiessa egskfirsek kkaalnpapr svethkappp regvvegaea
     1381 cpiaegtlee rpkaaskpsp eaveeplekp qqvavgeevk erswpfwmgs ppdsvvtelk
     1441 rskekeaqqr vgaaaapqed sstsasegsq pikwghlfgs rkvqkeprqp nrlpsgwlsl
     1501 dksvfqlvaq tvgasmwrea apepdpphpe ppeapaeaqp vremsphptc evkalchhia
     1561 teagqlsfnk gdilqviskv dgdwlqcslg sekglvpimy vthpededy
//
LOCUS       XP_041324530            1609 aa            linear   VRT 06-MAY-2021
DEFINITION  iporin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324530
VERSION     XP_041324530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1609
                     /product="iporin isoform X1"
                     /calculated_mol_wt=175857
     Region          1030..1187
                     /region_name="RUN_RUSC2"
                     /note="RUN domain found in RUN and SH3 domain-containing
                     protein 2 (RUSC2) and similar proteins; cd17702"
                     /db_xref="CDD:439064"
     Region          1551..1602
                     /region_name="SH3_RUSC2"
                     /note="Src homology 3 domain of RUN and SH3
                     domain-containing protein 2; cd11957"
                     /db_xref="CDD:212890"
     Site            order(1556,1558,1561,1565,1583..1584,1597,1599..1600)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212890"
     CDS             1..1609
                     /gene="RUSC2"
                     /coded_by="XM_041468596.1:428..5257"
                     /db_xref="GeneID:121354177"
ORIGIN      
        1 mdsppkltge tlivhhiplv hcqvpdrqcc svskrtnpfc qpelsitrts alpdrdlsqt
       61 dslvyssflq tsetsaeasd hkerkardli vpsvskrhnp fllsegedls ifgddlgqks
      121 fhlhnslvdg kppfnlqdla lppfhlhdsn hivkswnmas rsgvvdgqed klssddiqkr
      181 nnanrchqas ermeldecsc hrgsssnfsf dsgdqewnqn mgeplrnqdt lhrtcscsss
      241 eiqhcrcyss ssqsevidqq mgyisdsscn ssdgvlvnfs alynkmngqp qsnlnsanls
      301 cdssfcshsd tgafyldlhs spteskmsce shnpessgkv cgcqhssspv ldancnsyhl
      361 hcepctsess dltacfqsqa rlvvatqnyy klvtcdlssq sspspagssi tscsedqtkg
      421 spaqpteyyl frrpdlrqeg nvecseeepk gessqnmieg qvyvnvsppn lntsrqrsrs
      481 ydqnldrspg srlgslermv scpvklsesp aipiqssppk rvtsfaelak grkkngtspp
      541 hrssgdssle fspipetqrd cptfleerar rsqslppmpf ihglnrsceg fclnhafgds
      601 qalcstkdsv ssekvpsghg ageqaslsll teadasfssg sasghgqkdv raradgggsd
      661 skpvvryskd qrpttlpiqp fvfqhhfskp pkaralhshf asslsqlysl ssnrpasqqi
      721 sssqssalat saeqaavags qahgtlvtqr sadgaasrgd ggikkpgpet trpsplgsys
      781 pvrcnvpffq svdsssspts eraedsqppr srscpisanl lpmrsspavs amqpskatka
      841 dtlrqkenpk lipkkeaple pspplseyrl hsgslpplsv ggmsmsrvgg hadshwrsgs
      901 etsssgplss mgirpvnanh lspqalkwre yrrrnplgld rvsglpslag sldrrqqepr
      961 lnrgnpifel pgalstshfh cklngqsmrq lqltyndffp dyfslaekpp aefclspdgn
     1021 tesisidllq kkglvkaint avdlivahfg tsrdpgvkak lgnssvspnv ghlilkylcp
     1081 avrdilsdgl kayvldmiig qrrnipwsvv eastqlgpst kllhslyski sqyteltnht
     1141 mrfnafifgl lnirslefwf nhlynhedii lahyqpvgfl clshsvcqpl feelllllqp
     1201 lsllpfnldl lfehhlmqmg keqqqqkell rvkqdlllsv hstlqlmrtr gssedpdgcs
     1261 tapeacqgga rdgdispghs pqqavsekrv kgvgascgeg dreeeqskmr estwegkkdk
     1321 qagwwyqlmq tsqiyiessa egskfirsek kkaalnpapr svethkappp regvvegaea
     1381 cpiaegtlee rpkaaskpsp eaveeplekp qqvavgeevk erswpfwmgs ppdsvvtelk
     1441 rskekeaqqr vgaaaapqed sstsasegsq pikwghlfgs rkvqkeprqp nrlpsgwlsl
     1501 dksvfqlvaq tvgasmwrea apepdpphpe ppeapaeaqp vremsphptc evkalchhia
     1561 teagqlsfnk gdilqviskv dgdwlqcslg sekglvpimy vthpededy
//
LOCUS       XP_041324531            1609 aa            linear   VRT 06-MAY-2021
DEFINITION  iporin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324531
VERSION     XP_041324531.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468597.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1609
                     /product="iporin isoform X1"
                     /calculated_mol_wt=175857
     Region          1030..1187
                     /region_name="RUN_RUSC2"
                     /note="RUN domain found in RUN and SH3 domain-containing
                     protein 2 (RUSC2) and similar proteins; cd17702"
                     /db_xref="CDD:439064"
     Region          1551..1602
                     /region_name="SH3_RUSC2"
                     /note="Src homology 3 domain of RUN and SH3
                     domain-containing protein 2; cd11957"
                     /db_xref="CDD:212890"
     Site            order(1556,1558,1561,1565,1583..1584,1597,1599..1600)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212890"
     CDS             1..1609
                     /gene="RUSC2"
                     /coded_by="XM_041468597.1:246..5075"
                     /db_xref="GeneID:121354177"
ORIGIN      
        1 mdsppkltge tlivhhiplv hcqvpdrqcc svskrtnpfc qpelsitrts alpdrdlsqt
       61 dslvyssflq tsetsaeasd hkerkardli vpsvskrhnp fllsegedls ifgddlgqks
      121 fhlhnslvdg kppfnlqdla lppfhlhdsn hivkswnmas rsgvvdgqed klssddiqkr
      181 nnanrchqas ermeldecsc hrgsssnfsf dsgdqewnqn mgeplrnqdt lhrtcscsss
      241 eiqhcrcyss ssqsevidqq mgyisdsscn ssdgvlvnfs alynkmngqp qsnlnsanls
      301 cdssfcshsd tgafyldlhs spteskmsce shnpessgkv cgcqhssspv ldancnsyhl
      361 hcepctsess dltacfqsqa rlvvatqnyy klvtcdlssq sspspagssi tscsedqtkg
      421 spaqpteyyl frrpdlrqeg nvecseeepk gessqnmieg qvyvnvsppn lntsrqrsrs
      481 ydqnldrspg srlgslermv scpvklsesp aipiqssppk rvtsfaelak grkkngtspp
      541 hrssgdssle fspipetqrd cptfleerar rsqslppmpf ihglnrsceg fclnhafgds
      601 qalcstkdsv ssekvpsghg ageqaslsll teadasfssg sasghgqkdv raradgggsd
      661 skpvvryskd qrpttlpiqp fvfqhhfskp pkaralhshf asslsqlysl ssnrpasqqi
      721 sssqssalat saeqaavags qahgtlvtqr sadgaasrgd ggikkpgpet trpsplgsys
      781 pvrcnvpffq svdsssspts eraedsqppr srscpisanl lpmrsspavs amqpskatka
      841 dtlrqkenpk lipkkeaple pspplseyrl hsgslpplsv ggmsmsrvgg hadshwrsgs
      901 etsssgplss mgirpvnanh lspqalkwre yrrrnplgld rvsglpslag sldrrqqepr
      961 lnrgnpifel pgalstshfh cklngqsmrq lqltyndffp dyfslaekpp aefclspdgn
     1021 tesisidllq kkglvkaint avdlivahfg tsrdpgvkak lgnssvspnv ghlilkylcp
     1081 avrdilsdgl kayvldmiig qrrnipwsvv eastqlgpst kllhslyski sqyteltnht
     1141 mrfnafifgl lnirslefwf nhlynhedii lahyqpvgfl clshsvcqpl feelllllqp
     1201 lsllpfnldl lfehhlmqmg keqqqqkell rvkqdlllsv hstlqlmrtr gssedpdgcs
     1261 tapeacqgga rdgdispghs pqqavsekrv kgvgascgeg dreeeqskmr estwegkkdk
     1321 qagwwyqlmq tsqiyiessa egskfirsek kkaalnpapr svethkappp regvvegaea
     1381 cpiaegtlee rpkaaskpsp eaveeplekp qqvavgeevk erswpfwmgs ppdsvvtelk
     1441 rskekeaqqr vgaaaapqed sstsasegsq pikwghlfgs rkvqkeprqp nrlpsgwlsl
     1501 dksvfqlvaq tvgasmwrea apepdpphpe ppeapaeaqp vremsphptc evkalchhia
     1561 teagqlsfnk gdilqviskv dgdwlqcslg sekglvpimy vthpededy
//
LOCUS       XP_041324532            1609 aa            linear   VRT 06-MAY-2021
DEFINITION  iporin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324532
VERSION     XP_041324532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468598.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1609
                     /product="iporin isoform X1"
                     /calculated_mol_wt=175857
     Region          1030..1187
                     /region_name="RUN_RUSC2"
                     /note="RUN domain found in RUN and SH3 domain-containing
                     protein 2 (RUSC2) and similar proteins; cd17702"
                     /db_xref="CDD:439064"
     Region          1551..1602
                     /region_name="SH3_RUSC2"
                     /note="Src homology 3 domain of RUN and SH3
                     domain-containing protein 2; cd11957"
                     /db_xref="CDD:212890"
     Site            order(1556,1558,1561,1565,1583..1584,1597,1599..1600)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212890"
     CDS             1..1609
                     /gene="RUSC2"
                     /coded_by="XM_041468598.1:235..5064"
                     /db_xref="GeneID:121354177"
ORIGIN      
        1 mdsppkltge tlivhhiplv hcqvpdrqcc svskrtnpfc qpelsitrts alpdrdlsqt
       61 dslvyssflq tsetsaeasd hkerkardli vpsvskrhnp fllsegedls ifgddlgqks
      121 fhlhnslvdg kppfnlqdla lppfhlhdsn hivkswnmas rsgvvdgqed klssddiqkr
      181 nnanrchqas ermeldecsc hrgsssnfsf dsgdqewnqn mgeplrnqdt lhrtcscsss
      241 eiqhcrcyss ssqsevidqq mgyisdsscn ssdgvlvnfs alynkmngqp qsnlnsanls
      301 cdssfcshsd tgafyldlhs spteskmsce shnpessgkv cgcqhssspv ldancnsyhl
      361 hcepctsess dltacfqsqa rlvvatqnyy klvtcdlssq sspspagssi tscsedqtkg
      421 spaqpteyyl frrpdlrqeg nvecseeepk gessqnmieg qvyvnvsppn lntsrqrsrs
      481 ydqnldrspg srlgslermv scpvklsesp aipiqssppk rvtsfaelak grkkngtspp
      541 hrssgdssle fspipetqrd cptfleerar rsqslppmpf ihglnrsceg fclnhafgds
      601 qalcstkdsv ssekvpsghg ageqaslsll teadasfssg sasghgqkdv raradgggsd
      661 skpvvryskd qrpttlpiqp fvfqhhfskp pkaralhshf asslsqlysl ssnrpasqqi
      721 sssqssalat saeqaavags qahgtlvtqr sadgaasrgd ggikkpgpet trpsplgsys
      781 pvrcnvpffq svdsssspts eraedsqppr srscpisanl lpmrsspavs amqpskatka
      841 dtlrqkenpk lipkkeaple pspplseyrl hsgslpplsv ggmsmsrvgg hadshwrsgs
      901 etsssgplss mgirpvnanh lspqalkwre yrrrnplgld rvsglpslag sldrrqqepr
      961 lnrgnpifel pgalstshfh cklngqsmrq lqltyndffp dyfslaekpp aefclspdgn
     1021 tesisidllq kkglvkaint avdlivahfg tsrdpgvkak lgnssvspnv ghlilkylcp
     1081 avrdilsdgl kayvldmiig qrrnipwsvv eastqlgpst kllhslyski sqyteltnht
     1141 mrfnafifgl lnirslefwf nhlynhedii lahyqpvgfl clshsvcqpl feelllllqp
     1201 lsllpfnldl lfehhlmqmg keqqqqkell rvkqdlllsv hstlqlmrtr gssedpdgcs
     1261 tapeacqgga rdgdispghs pqqavsekrv kgvgascgeg dreeeqskmr estwegkkdk
     1321 qagwwyqlmq tsqiyiessa egskfirsek kkaalnpapr svethkappp regvvegaea
     1381 cpiaegtlee rpkaaskpsp eaveeplekp qqvavgeevk erswpfwmgs ppdsvvtelk
     1441 rskekeaqqr vgaaaapqed sstsasegsq pikwghlfgs rkvqkeprqp nrlpsgwlsl
     1501 dksvfqlvaq tvgasmwrea apepdpphpe ppeapaeaqp vremsphptc evkalchhia
     1561 teagqlsfnk gdilqviskv dgdwlqcslg sekglvpimy vthpededy
//
LOCUS       XP_041324533            1575 aa            linear   VRT 06-MAY-2021
DEFINITION  iporin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324533
VERSION     XP_041324533.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468599.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1575
                     /product="iporin isoform X2"
                     /calculated_mol_wt=172469
     Region          996..1153
                     /region_name="RUN_RUSC2"
                     /note="RUN domain found in RUN and SH3 domain-containing
                     protein 2 (RUSC2) and similar proteins; cd17702"
                     /db_xref="CDD:439064"
     Region          1517..1568
                     /region_name="SH3_RUSC2"
                     /note="Src homology 3 domain of RUN and SH3
                     domain-containing protein 2; cd11957"
                     /db_xref="CDD:212890"
     Site            order(1522,1524,1527,1531,1549..1550,1563,1565..1566)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212890"
     CDS             1..1575
                     /gene="RUSC2"
                     /coded_by="XM_041468599.1:507..5234"
                     /db_xref="GeneID:121354177"
ORIGIN      
        1 mdsppkltge tlivhhiplv hcqvpdrqcc svskrtnpfc qpelsitrts alpdrdlsqt
       61 dslvyssflq tsetsaeasd hkerkardli vpsvskrhnp fllsegedls ifgddlgqks
      121 fhlhnslvdg kppfnlqdla lppfhlhdsn hivkswnmas rsgvvdgqed klssddiqkr
      181 nnanrchqas ermeldecsc hrgsssnfsf dsgdqewnqn mgeplrnqdt lhrtcscsss
      241 eiqhcrcyss ssqsevidqq mgyisdsscn ssdgvlvnfs alynkmngqp qsnlnsanls
      301 cdssfcshsd tgafyldlhs spteskmsce shnpessgkv cgcqhssspv ldancnsyhl
      361 hcepctsess dltacfqsqa rlvvatqnyy klvtcdlssq sspspagssi tscsedqtkg
      421 spaqpteyyl frrpdlrqeg nvecseeepk gessqnmieg qvyvnvsppn lntsrqrsrs
      481 ydqnldrspg srlgslermv scpvklsesp aipiqssppk rvtsfaelak grkkngtspp
      541 hrssgdssle fspipetqrd cptfleerar rsqslppmpf ihglnrsceg fclnhafgds
      601 qalcstkdsv ssekvpsghg agggsdskpv vryskdqrpt tlpiqpfvfq hhfskppkar
      661 alhshfassl sqlyslssnr pasqqisssq ssalatsaeq aavagsqahg tlvtqrsadg
      721 aasrgdggik kpgpettrps plgsyspvrc nvpffqsvds sssptserae dsqpprsrsc
      781 pisanllpmr sspavsamqp skatkadtlr qkenpklipk keaplepspp lseyrlhsgs
      841 lpplsvggms msrvgghads hwrsgsetss sgplssmgir pvnanhlspq alkwreyrrr
      901 nplgldrvsg lpslagsldr rqqeprlnrg npifelpgal stshfhckln gqsmrqlqlt
      961 yndffpdyfs laekppaefc lspdgntesi sidllqkkgl vkaintavdl ivahfgtsrd
     1021 pgvkaklgns svspnvghli lkylcpavrd ilsdglkayv ldmiigqrrn ipwsvveast
     1081 qlgpstkllh slyskisqyt eltnhtmrfn afifgllnir slefwfnhly nhediilahy
     1141 qpvgflclsh svcqplfeel llllqplsll pfnldllfeh hlmqmgkeqq qqkellrvkq
     1201 dlllsvhstl qlmrtrgsse dpdgcstape acqggardgd ispghspqqa vsekrvkgvg
     1261 ascgegdree eqskmrestw egkkdkqagw wyqlmqtsqi yiessaegsk firsekkkaa
     1321 lnpaprsvet hkapppregv vegaeacpia egtleerpka askpspeave eplekpqqva
     1381 vgeevkersw pfwmgsppds vvtelkrske keaqqrvgaa aapqedssts asegsqpikw
     1441 ghlfgsrkvq keprqpnrlp sgwlsldksv fqlvaqtvga smwreaapep dpphpeppea
     1501 paeaqpvrem sphptcevka lchhiateag qlsfnkgdil qviskvdgdw lqcslgsekg
     1561 lvpimyvthp ededy
//
LOCUS       XP_041324534            1542 aa            linear   VRT 06-MAY-2021
DEFINITION  iporin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324534
VERSION     XP_041324534.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468600.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1542
                     /product="iporin isoform X3"
                     /calculated_mol_wt=168231
     Region          963..1120
                     /region_name="RUN_RUSC2"
                     /note="RUN domain found in RUN and SH3 domain-containing
                     protein 2 (RUSC2) and similar proteins; cd17702"
                     /db_xref="CDD:439064"
     Region          1484..1535
                     /region_name="SH3_RUSC2"
                     /note="Src homology 3 domain of RUN and SH3
                     domain-containing protein 2; cd11957"
                     /db_xref="CDD:212890"
     Site            order(1489,1491,1494,1498,1516..1517,1530,1532..1533)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212890"
     CDS             1..1542
                     /gene="RUSC2"
                     /coded_by="XM_041468600.1:507..5135"
                     /db_xref="GeneID:121354177"
ORIGIN      
        1 mdsppkltge tlivhhiplv hcqvpdrqcc svskrtnpfc qpelsitrts alpdrdlsqt
       61 dslvyssflq tsetsaeasd hkerkardli vpsvskrhnp fllsegedls ifgddlgqks
      121 fhlhnslvdg kppfnlqdla lppfhlhdsn hivkswnmas rsgvvdgqed klssddiqkr
      181 nnanrchqas ermeldecsc hrgsssnfsf dsgdqewnqn mgeplrnqdt lhrtcscsss
      241 eiqhcrcyss ssqsevidqq mgyisdsscn ssdgvlvnfs alynkmngqp qsnlnsanls
      301 cdssfcshsd tgafyldlhs spteskmsce shnpessgkv cgcqhssspv ldancnsyhl
      361 hcepctsess dltacfqsqa rlvvatqnyy klvtcdlssq sspspagssi tscsedqtkg
      421 spaqpteyyl frrpdlrqeg nvecseeepk gessqnmieg qvyvnvsppn lntsrqrsrs
      481 ydqnldrspg srlgslermv scpvklsesp aipiqssppk rvtsfaelak grkkngtspp
      541 hrssgdssle fspipetqrd cptfleerar rsqslppmpf ihglnrsceg fclnhafgds
      601 qalcstkdsv ssekvpsghg ageqaslsll teadasfssg sasghgqkdv raradgggsd
      661 skpvvryskd qrpttlpiqp fvfqhhfskp pkaralhshf asslsqlysl ssnrpasqqi
      721 sssqssalat saeqaavags qahgtlvtqr sadgaasrgd ggikkpgpet trpsplgsys
      781 pvrcnvpffq svdsssspts eraedsqppr srscpisanl lpmrsspavs amqpskatka
      841 dtlrqkenpk lipkkeaple pspplseyrl hsgslpplsv ggmsmsrvgg hadshwrsgs
      901 etsssgplss mgirpvngqs mrqlqltynd ffpdyfslae kppaefclsp dgntesisid
      961 llqkkglvka intavdliva hfgtsrdpgv kaklgnssvs pnvghlilky lcpavrdils
     1021 dglkayvldm iigqrrnipw svveastqlg pstkllhsly skisqytelt nhtmrfnafi
     1081 fgllnirsle fwfnhlynhe diilahyqpv gflclshsvc qplfeellll lqplsllpfn
     1141 ldllfehhlm qmgkeqqqqk ellrvkqdll lsvhstlqlm rtrgssedpd gcstapeacq
     1201 ggardgdisp ghspqqavse krvkgvgasc gegdreeeqs kmrestwegk kdkqagwwyq
     1261 lmqtsqiyie ssaegskfir sekkkaalnp aprsvethka pppregvveg aeacpiaegt
     1321 leerpkaask pspeaveepl ekpqqvavge evkerswpfw mgsppdsvvt elkrskekea
     1381 qqrvgaaaap qedsstsase gsqpikwghl fgsrkvqkep rqpnrlpsgw lsldksvfql
     1441 vaqtvgasmw reaapepdpp hpeppeapae aqpvremsph ptcevkalch hiateagqls
     1501 fnkgdilqvi skvdgdwlqc slgsekglvp imyvthpede dy
//
LOCUS       XP_041324535            1177 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid-transporting ATPase ID-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324535
VERSION     XP_041324535.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468601.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1177
                     /product="phospholipid-transporting ATPase ID-like"
                     /calculated_mol_wt=133949
     Region          35..978
                     /region_name="P-type_ATPase_APLT_Dnf-like"
                     /note="Aminophospholipid translocases (APLTs), similar to
                     Saccharomyces cerevisiae Dnf1-3p, Drs2p, and human ATP8A2,
                     -10D, -11B, -11C; cd02073"
                     /db_xref="CDD:319770"
     Site            order(397..399,542,565..567,632,679..681,794,797,800,820,
                     823)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:319770"
     CDS             1..1177
                     /gene="LOC121354179"
                     /coded_by="XM_041468601.1:250..3783"
                     /db_xref="GeneID:121354179"
ORIGIN      
        1 mslfglkfgk kkfkeeerql qannrdfnlq feyannsikt skynfftflp lnlfeqfqri
       61 anayflflli lqlipqissl awfttvvplv lvlavsgvkd aiddfnrhks dkhvnnrpvq
      121 vlingmlkeq kwmnvqvgdi iklennnfvt adllllssse phsltyieta eldgetnlkv
      181 kqaltvtael gedlqkltef ngevrceapn nkldkftgtl tlrggkyald nekmllrgct
      241 irntewcfgl viyagpdtkl mqnsgkttfk rtsidrlmnv lvlvifafla lmclilaign
      301 giwehdkgyy fqvylpwaeg vnsasysgfl mfwsyviiln tvvpislyvs veiirlgnsf
      361 yidwdrkmyy plndtpaqar tttlneelgq ikyifsdktg tltqnimcfn kcsingksyg
      421 dvydmsgqri einentekvd fsynpladpk fafydhslve avklndvpth rffrllslch
      481 tvmpeekkeg nlvyqaqspd egalvtaarn fgfvfrartp etitvvemge tkvykllail
      541 dfnnvrkrms vivqspegdl tlyckgadti lyellhpscn slkeettehl nefageglrt
      601 lvvaykslee dyfqdwirrh heastalegr edklselyee iekdlmllga taiedklqdg
      661 vpqtietlak anikiwvltg dkqetamnig yscnllnddm eevfiiegst sddvlnelrn
      721 arkkmkpdsf ldsdeiniqf eksskkqiii pdeqangvyg lvitghslay alegnlelel
      781 vrtacmckvv iccrvtplqk aqvvelvkky kkavtlaigd gandvsmikt ahigvgisgq
      841 egmqavlssd fsfaqfrylq rlllvhgrws yirmckflky ffyknfaftl vhfwygffsg
      901 fsaqtvydew fitlynlvyt slpvlgmslf dqdvddrwsm lfpqlyvpgq qnlyfnkvvf
      961 vkcmlqgiys slilffipyg amyntmrsdg kaiadyqsfa lmaqtclliv vsvqigldts
     1021 ywtvvnqffi wgslsvyfai tftmysdgmy liftasfpfi gtarntlsqp nvwlaiflsi
     1081 tlcvlpvvgf rflkaqlkpt psdkvllkik eakkrpppps pkrrlrrtst rrsgyafshq
     1141 hgfgalimsg rnmrpkspfa ttgtfspnsd kykhkgl
//
LOCUS       XP_041324536            1613 aa            linear   VRT 06-MAY-2021
DEFINITION  protein unc-13 homolog B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324536
VERSION     XP_041324536.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468602.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1613
                     /product="protein unc-13 homolog B isoform X1"
                     /calculated_mol_wt=183005
     Region          1..127
                     /region_name="C2A_Munc13"
                     /note="C2 domain first repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd08394"
                     /db_xref="CDD:176040"
     Site            order(23,25,27,31..34,63,65,71..74)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:176040"
     Region          458..539
                     /region_name="C1_Munc13-2-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Munc13-2, Munc13-3 and similar proteins; cd20859"
                     /db_xref="CDD:410409"
     Site            order(482..488,496..500,503)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410409"
     Region          599..725
                     /region_name="C2B_Munc13"
                     /note="C2 domain second repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd04027"
                     /db_xref="CDD:175993"
     Site            order(615,621,667,669,686)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175993"
     Region          917..1408
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     Region          1461..1580
                     /region_name="C2C_Munc13"
                     /note="C2 domain third repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd08395"
                     /db_xref="CDD:176041"
     CDS             1..1613
                     /gene="UNC13B"
                     /coded_by="XM_041468602.1:78..4919"
                     /db_xref="GeneID:121354180"
ORIGIN      
        1 msllcvrvkk aklhgppdkf ntyvtlkvqn vksttvavrg dqpcweqdfm feinrldlgl
       61 ivevwnkgli wdtlvgtvwi alkaihqsde egpgewstle aevvmkhdei cgtknptphk
      121 illdtrfelp fdipeeeary wtrkleqins lgddeypfqe evqkkplpsa asqcsfedad
      181 savddrdsdy rsetsnsipp pyhttvqpna svhqftgpar lqqqgvlrds cadslqnydl
      241 dyrehvaasp agssrygssc nvsqesshls elehshesah gseqeddhqe rqsnhsyhss
      301 ssyqkdgqaw lkeqeeshgk geeekfckte ekpadhsaak lplevekpkd vdvgvqrsyq
      361 gdiepppfpp arahwirais kvrlqlqqgq deadpskppw lkggpaggly gidsmpdlrk
      421 kkpiplvsdl slvqsrkagi tsamatrtsl kdeelkshvy kktlqaliyp iscttphnfe
      481 vwtattptyc yecegllwgi arqgmrcgec gvkchekcqd llnadclqra aeksskhgae
      541 drtqnfimam kdrmkirern kpeifdlird vfceskmtha qqmktvkqsv ldgtskwsak
      601 ititvvcaqg lqakdktgss dpyvtvqvgk tkkrtktifg nlnpvweekf yfechnssdr
      661 ikvrvwdedd diksrvkqrl kresddflgq tiievrtlsg emdvwynlek rtdksavsga
      721 irlqisveik geekvapyhv qytclhenlf hhltdvqgng vvkipdakgd dawkvyfdet
      781 aqeivdefam rygiesiyqa mthfaclssk ymcpgvpavm stllaninay yahttastnv
      841 sasdrfaasn fgkerfvkll dqlhnslrid lsmyrnnfpa ssrerlqdlk stvdlltsit
      901 ffrmkvqelq spprasqvvk dcvkaclnst yeyifnnche lysreyqtdp nktqdlpaee
      961 qgpsirnldf wpklitlivs iieedknsyt pvlnqfpqel avgkisaevm wslfaqdmky
     1021 ameehekhrl cksadymnlh fkvkwlyney vrdlpafkgk vpeypawfeq fvmqwldene
     1081 dvsldflhga lerdkkdgfq qtsehalfsc svvdvftqln qsfeiikkle cpdpvivahy
     1141 nrrfaktigk vlmqyadils ksfesycske klpcilmnnv qqlrvqlekm feamggkeld
     1201 aeasdhlkel qvklnnvlde lsavfgnsfq tridecvkqm sdilcqvkgt ansaanarnt
     1261 vaqdadnvlr plmdfldgnl tlfatvcekt vlkrvlkelw rvvmntmekl ivlppltdht
     1321 gtqlifsaak elghlsklkd hmvreetrsl tpkqcavldl aldtikqyfh aggnglkktf
     1381 lekspdlqsl ryalslytqt tdtliktfvq sqtaqvhdgk girftanedi lpdkgsgvdd
     1441 pvgevsiqid lythpgtgeh kvtvkvvaan dlkwqtsgmf rpfveitmig phqsdkkrkf
     1501 ttksksnnwa pkynetfhfi lgnedgpday elqvcvkdyc faredrvlgi avmqlrdiad
     1561 kgscacwcpl grrihmdetg ltilrilsqr tndevakefv klksesrste egt
//
LOCUS       XP_041324537            1594 aa            linear   VRT 06-MAY-2021
DEFINITION  protein unc-13 homolog B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324537
VERSION     XP_041324537.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468603.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521429.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1594
                     /product="protein unc-13 homolog B isoform X2"
                     /calculated_mol_wt=180898
     Region          1..127
                     /region_name="C2A_Munc13"
                     /note="C2 domain first repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd08394"
                     /db_xref="CDD:176040"
     Site            order(23,25,27,31..34,63,65,71..74)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:176040"
     Region          458..539
                     /region_name="C1_Munc13-2-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Munc13-2, Munc13-3 and similar proteins; cd20859"
                     /db_xref="CDD:410409"
     Site            order(482..488,496..500,503)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410409"
     Region          599..725
                     /region_name="C2B_Munc13"
                     /note="C2 domain second repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd04027"
                     /db_xref="CDD:175993"
     Site            order(615,621,667,669,686)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175993"
     Region          917..1408
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     Region          1442..1561
                     /region_name="C2C_Munc13"
                     /note="C2 domain third repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd08395"
                     /db_xref="CDD:176041"
     CDS             1..1594
                     /gene="UNC13B"
                     /coded_by="XM_041468603.1:78..4862"
                     /db_xref="GeneID:121354180"
ORIGIN      
        1 msllcvrvkk aklhgppdkf ntyvtlkvqn vksttvavrg dqpcweqdfm feinrldlgl
       61 ivevwnkgli wdtlvgtvwi alkaihqsde egpgewstle aevvmkhdei cgtknptphk
      121 illdtrfelp fdipeeeary wtrkleqins lgddeypfqe evqkkplpsa asqcsfedad
      181 savddrdsdy rsetsnsipp pyhttvqpna svhqftgpar lqqqgvlrds cadslqnydl
      241 dyrehvaasp agssrygssc nvsqesshls elehshesah gseqeddhqe rqsnhsyhss
      301 ssyqkdgqaw lkeqeeshgk geeekfckte ekpadhsaak lplevekpkd vdvgvqrsyq
      361 gdiepppfpp arahwirais kvrlqlqqgq deadpskppw lkggpaggly gidsmpdlrk
      421 kkpiplvsdl slvqsrkagi tsamatrtsl kdeelkshvy kktlqaliyp iscttphnfe
      481 vwtattptyc yecegllwgi arqgmrcgec gvkchekcqd llnadclqra aeksskhgae
      541 drtqnfimam kdrmkirern kpeifdlird vfceskmtha qqmktvkqsv ldgtskwsak
      601 ititvvcaqg lqakdktgss dpyvtvqvgk tkkrtktifg nlnpvweekf yfechnssdr
      661 ikvrvwdedd diksrvkqrl kresddflgq tiievrtlsg emdvwynlek rtdksavsga
      721 irlqisveik geekvapyhv qytclhenlf hhltdvqgng vvkipdakgd dawkvyfdet
      781 aqeivdefam rygiesiyqa mthfaclssk ymcpgvpavm stllaninay yahttastnv
      841 sasdrfaasn fgkerfvkll dqlhnslrid lsmyrnnfpa ssrerlqdlk stvdlltsit
      901 ffrmkvqelq spprasqvvk dcvkaclnst yeyifnnche lysreyqtdp nktqdlpaee
      961 qgpsirnldf wpklitlivs iieedknsyt pvlnqfpqel avgkisaevm wslfaqdmky
     1021 ameehekhrl cksadymnlh fkvkwlyney vrdlpafkgk vpeypawfeq fvmqwldene
     1081 dvsldflhga lerdkkdgfq qtsehalfsc svvdvftqln qsfeiikkle cpdpvivahy
     1141 nrrfaktigk vlmqyadils ksfesycske klpcilmnnv qqlrvqlekm feamggkeld
     1201 aeasdhlkel qvklnnvlde lsavfgnsfq tridecvkqm sdilcqvkgt ansaanarnt
     1261 vaqdadnvlr plmdfldgnl tlfatvcekt vlkrvlkelw rvvmntmekl ivlppltdht
     1321 gtqlifsaak elghlsklkd hmvreetrsl tpkqcavldl aldtikqyfh aggnglkktf
     1381 lekspdlqsl ryalslytqt tdtliktfvq sqtaqgsgvd dpvgevsiqi dlythpgtge
     1441 hkvtvkvvaa ndlkwqtsgm frpfveitmi gphqsdkkrk fttksksnnw apkynetfhf
     1501 ilgnedgpda yelqvcvkdy cfaredrvlg iavmqlrdia dkgscacwcp lgrrihmdet
     1561 gltilrilsq rtndevakef vklksesrst eegt
//
LOCUS       XP_041324538             518 aa            linear   VRT 06-MAY-2021
DEFINITION  cilia- and flagella-associated protein 45-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324538
VERSION     XP_041324538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468604.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521452.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>518
                     /product="cilia- and flagella-associated protein 45-like"
     Region          138..478
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     CDS             1..518
                     /gene="LOC121354181"
                     /coded_by="XM_041468604.1:<1..>1555"
                     /db_xref="GeneID:121354181"
ORIGIN      
        1 relgphgfsn tshlalgwlg gqvgssgntg tcwgpvplss lpvlpsipqe kpqpcliige
       61 keyeklkesa rapteeerwd rlktlrarqd aafealkkaq ieeqrkaele dkrdrrrdve
      121 eelqqeeqkl lqramrmrle qeedvrelna lflnakcnmi rdkqvlekrm inkeleeeek
      181 rldkmmemer ekgvevqeel erqrkqelmr arqdivkqme qnaeeralra eelyqegqrq
      241 lerleqmkre drkaweqkqe rlkqihadik hfnmesqrlk dqqreqerle dervleqqrq
      301 kaeweatlea eqqqlrleke kelarlratq eraqdwqaer dalrakrnqe vadrewrrre
      361 lekarkkael eqqlkqdrle qvaqkeqyla rqvqqdrqef qrvlrahqeq lerekleqeq
      421 relrqrahae dlrrqiqelq qqrqreraaf ieegrrqqqe irqrserlaq frqqklqefr
      481 sgaasaaslg slgspspswc pslghlpaps assangtc
//
LOCUS       XP_041324540             122 aa            linear   VRT 06-MAY-2021
DEFINITION  IQ motif and SEC7 domain-containing protein 2-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324540
VERSION     XP_041324540.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468606.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521496.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>122
                     /product="IQ motif and SEC7 domain-containing protein
                     2-like"
     Region          <1..63
                     /region_name="IQ_SEC7_PH"
                     /note="PH domain; pfam16453"
                     /db_xref="CDD:465120"
     CDS             1..122
                     /gene="LOC121354182"
                     /coded_by="XM_041468606.1:222..>587"
                     /db_xref="GeneID:121354182"
ORIGIN      
        1 mhmqlfqnay yqfgikllsa apggerkvli vfnapspqdr lrfasdlres vaevqemeky
       61 rveaelekqk gvagprgagp prealnglsr ssleeafgae glkrsalsss lrdlsdsget
      121 gs
//
LOCUS       XP_041324541             326 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear distribution protein nudE-like 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324541
VERSION     XP_041324541.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468607.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="nuclear distribution protein nudE-like 1 isoform
                     X1"
                     /calculated_mol_wt=36604
     Region          <27..>195
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          135..294
                     /region_name="NUDE_C"
                     /note="NUDE protein, C-terminal conserved region;
                     pfam04880"
                     /db_xref="CDD:461464"
     CDS             1..326
                     /gene="NDEL1"
                     /coded_by="XM_041468607.1:13..993"
                     /db_xref="GeneID:121354183"
ORIGIN      
        1 mdseeiptfs spkeetaywk elslkykqsf qeareelaef qegsreleae leaqlvqaeq
       61 rnrdlqadnq rlkyevetlk eklehqyaqs ykqvslledd lsqtraikdq lhkyvreleq
      121 anddlerakr ativsledfe qrlnqaiern afleselddk esllvsvqrl kdeardlrqe
      181 lavrerqqev trksapsspt ldcekmdsav qaslslpatp vgkgsensfp spkaipngfg
      241 tspltpsari salnivgdll rkvgaleskl aacrnfakdq asrksyisgn vgsavlssng
      301 tkypghtsff dkgreevifp tlvmgq
//
LOCUS       XP_041324542             354 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear distribution protein nudE-like 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324542
VERSION     XP_041324542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..354
                     /product="nuclear distribution protein nudE-like 1 isoform
                     X2"
                     /calculated_mol_wt=39169
     Region          <40..>208
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          148..307
                     /region_name="NUDE_C"
                     /note="NUDE protein, C-terminal conserved region;
                     pfam04880"
                     /db_xref="CDD:461464"
     CDS             1..354
                     /gene="NDEL1"
                     /coded_by="XM_041468608.1:116..1180"
                     /db_xref="GeneID:121354183"
ORIGIN      
        1 meslgslfkv vlimdseeip tfsspkeeta ywkelslkyk qsfqeareel aefqegsrel
       61 eaeleaqlvq aeqrnrdlqa dnqrlkyeve tlkeklehqy aqsykqvsll eddlsqtrai
      121 kdqlhkyvre leqanddler akrativsle dfeqrlnqai ernaflesel ddkesllvsv
      181 qrlkdeardl rqelavrerq qevtrksaps sptldcekmd savqaslslp atpvgkgsen
      241 sfpspkaipn gfgtspltps arisalnivg dllrkvgale sklaacrnfa kdqasrksyi
      301 sgnvgsavls sngtkypght sffdkgavng fdqgppglgg srpssapgml plsv
//
LOCUS       XP_041324543             351 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear distribution protein nudE-like 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324543
VERSION     XP_041324543.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468609.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="nuclear distribution protein nudE-like 1 isoform
                     X3"
                     /calculated_mol_wt=38761
     Region          <37..>205
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          145..304
                     /region_name="NUDE_C"
                     /note="NUDE protein, C-terminal conserved region;
                     pfam04880"
                     /db_xref="CDD:461464"
     CDS             1..351
                     /gene="NDEL1"
                     /coded_by="XM_041468609.1:6..1061"
                     /db_xref="GeneID:121354183"
ORIGIN      
        1 mgtapqvvli mdseeiptfs spkeetaywk elslkykqsf qeareelaef qegsreleae
       61 leaqlvqaeq rnrdlqadnq rlkyevetlk eklehqyaqs ykqvslledd lsqtraikdq
      121 lhkyvreleq anddlerakr ativsledfe qrlnqaiern afleselddk esllvsvqrl
      181 kdeardlrqe lavrerqqev trksapsspt ldcekmdsav qaslslpatp vgkgsensfp
      241 spkaipngfg tspltpsari salnivgdll rkvgaleskl aacrnfakdq asrksyisgn
      301 vgsavlssng tkypghtsff dkgavngfdq gppglggsrp ssapgmlpls v
//
LOCUS       XP_041324544             341 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear distribution protein nudE-like 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324544
VERSION     XP_041324544.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468610.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="nuclear distribution protein nudE-like 1 isoform
                     X4"
                     /calculated_mol_wt=37751
     Region          <27..>195
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          135..294
                     /region_name="NUDE_C"
                     /note="NUDE protein, C-terminal conserved region;
                     pfam04880"
                     /db_xref="CDD:461464"
     CDS             1..341
                     /gene="NDEL1"
                     /coded_by="XM_041468610.1:293..1318"
                     /db_xref="GeneID:121354183"
ORIGIN      
        1 mdseeiptfs spkeetaywk elslkykqsf qeareelaef qegsreleae leaqlvqaeq
       61 rnrdlqadnq rlkyevetlk eklehqyaqs ykqvslledd lsqtraikdq lhkyvreleq
      121 anddlerakr ativsledfe qrlnqaiern afleselddk esllvsvqrl kdeardlrqe
      181 lavrerqqev trksapsspt ldcekmdsav qaslslpatp vgkgsensfp spkaipngfg
      241 tspltpsari salnivgdll rkvgaleskl aacrnfakdq asrksyisgn vgsavlssng
      301 tkypghtsff dkgavngfdq gppglggsrp ssapgmlpls v
//
LOCUS       XP_041324545             321 aa            linear   VRT 06-MAY-2021
DEFINITION  protein shisa-6-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324545
VERSION     XP_041324545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="protein shisa-6-like"
                     /calculated_mol_wt=33785
     Region          99..266
                     /region_name="Shisa"
                     /note="Wnt and FGF inhibitory regulator; pfam13908"
                     /db_xref="CDD:464036"
     CDS             1..321
                     /gene="LOC121354184"
                     /coded_by="XM_041468611.1:1..966"
                     /db_xref="GeneID:121354184"
ORIGIN      
        1 mgprhlllpl lllslqllal llllpaqaag pprakgnrtq gaaaprrtpk pgkellnqtl
       61 agpgaaapta lpgrgkgagg gkaapggggg gggsapahet cwgyydvsgq wdkefecnns
      121 ltgfryccgt cfyrfccnkr aeklnqslcr nykspewahp ttasgalpad gsdggdgdan
      181 kydpdkdstn atvyiscgai afvliagvfa kvaydkarrp premnihral adilrqqgpi
      241 pighcereti saidtspken tpvrsssknh ytpvrtaksn pghygkdlyr sggpdlhnfi
      301 ssgfvtlgrg htkgtvetif c
//
LOCUS       XP_041324546            1976 aa            linear   VRT 06-MAY-2021
DEFINITION  myosin-10 [Pyrgilauda ruficollis].
ACCESSION   XP_041324546
VERSION     XP_041324546.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468612.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1976
                     /product="myosin-10"
                     /calculated_mol_wt=228716
     Region          31..76
                     /region_name="Myosin_N"
                     /note="Myosin N-terminal SH3-like domain; pfam02736"
                     /db_xref="CDD:460670"
     Region          99..771
                     /region_name="MYSc_Myh10"
                     /note="class II myosin heavy chain 10, motor domain;
                     cd14920"
                     /db_xref="CDD:276952"
     Site            order(126..134,178..185,231..241,459..464)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276952"
     Site            126..134
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276952"
     Site            178..185
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276952"
     Site            231..241
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276952"
     Site            459..464
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276952"
     Site            order(488..499,502..511)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276952"
     Site            703..712
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276952"
     Site            715..771
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276952"
     Region          848..1928
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1976
                     /gene="MYH10"
                     /coded_by="XM_041468612.1:55..5985"
                     /db_xref="GeneID:121354185"
ORIGIN      
        1 maqrsgqedp erylfvdrav iynpatqadw takklvwips erhgfeaasi keekgdevlv
       61 elaengkkal vnkddvqkmn ppkfskvedm aeltclneas vlhnlkdryy sgliytysgl
      121 fcvvinpykn lpiyseniie myrgkkrhem pphiyaises ayrcmlqdre dqsilctges
      181 gagktentkk viqylahvas shkgrkdhni pgelerqllq anpilesfgn aktvkndnss
      241 rfgkfirinf dvtgyivgan ietylleksr avrqakdert fhifyqllag agehlksdll
      301 legfnnyrfl sngyipipgq qdkdnfqetm eamhimgfsh deilsmlkvv ssvlqfgnis
      361 fkkerntdqa smpentvaqk lchllgmnvm eftrailtpr ikvgrdyvqk aqtkeqadfa
      421 vealakatye rlfrwlvhri nkaldrtkrq gasfigildi agfeifelns feqlcinytn
      481 eklqqlfnht mfileqeeyq regiewnfid fgldlqpcid lierpanppg vlalldeecw
      541 fpkatdktfv eklvqeqgth skfqkprqlk dkadfciihy agkvdykade wlmknmdpln
      601 dnvatllhqs sdkfvaelwk dvdrivgldq vtgitetafg sayktkkgmf rtvgqlykes
      661 ltklmatlrn tnpnfvrcii pnhekragkl dphlvldqlr cngvlegiri crqgfpnriv
      721 fqefrqryei ltpnaipkgf mdgkqacerm iraleldpnl yrigqskiff ragvlahlee
      781 erdlkitdii iffqavcrgy larkafakkq qqlsalkilq rncaaylklr hwqwwrvftk
      841 vkpllqvtrq eeelqakdee lmkvkekqtk veaeleemer khqqvleekn ilaeqlqaet
      901 elfaeaeemr arlaakkqel eeilhdlesr veeeeernqi lqnekkkmqg hiqdleeqld
      961 eeegarqklq lekvtaeaki kkmeeeilll edqnskflke kklmedriae cssqlaeeee
     1021 kaknlaklkn kqemmitdle erlkkeektr qelekakrkl dgettdlqdq iaelqaqiee
     1081 lkiqlakkee elqaavargd eeavqknnal kvirelqaqi aelqedlese kasrnkaekq
     1141 krdlseelea lkteledtld ttaaqqelrt kreqevaelk kaieeetknh eaqiqeirqr
     1201 hataleelse qleqakrfka nleknkqgle sdnkelacev kvlqqvkaes ehkrkkldaq
     1261 vqeltakvse gerlrvelae kanklqneld nvsslleeae kkgikfakda aslesqlqdt
     1321 qellqeetrq klnlssrirq leeeknnlqe qqeeeeeark nlekqmlalq aqlaeakkkv
     1381 dddlgtiegl eetkkkllkd meslsqrlee kalaydklek tknrlqqeld dlmvdldhqr
     1441 qivsnlekkq kkfdqmlaee knisaryaee rdraeaeare ketkalslar aleealeake
     1501 eferqnkqlr admedlmssk ddvgknvhel ekskrtleqq veemrtqlee ledelqated
     1561 aklrlevnmq amkaqfdrdl qardeqneek krmlvkqvre leaelederk qralavaakk
     1621 klemdlkdle gqieaankar deaikqlrkl qaqmkdyqre leearasrde ifaqskesek
     1681 klksleaeil qlqeefaase rarrhaeqer deladeians asgksallde krrleariaq
     1741 leeeleeeqs nmellnerfr kttlqvdtln selagersaa qksenarqql erqnkelkak
     1801 lqelegsvks kfkatistle akiaqleeql eqeakeraaa nklvrrtekk lkevfmqved
     1861 errhadqyke qmekanarmk qlkrqleeae eeatranasr rklqreldda teaneglsre
     1921 vstlknrlrr ggpitfsssr sgrrqlhieg aslelsddda eskgsdvnea ppapae
//
LOCUS       XP_041324547             218 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 222 [Pyrgilauda ruficollis].
ACCESSION   XP_041324547
VERSION     XP_041324547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468613.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="RING finger protein 222"
                     /calculated_mol_wt=23261
     Region          26..85
                     /region_name="RING-HC_RNF222"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 222 (RNF222) and similar proteins; cd16564"
                     /db_xref="CDD:438226"
     CDS             1..218
                     /gene="RNF222"
                     /coded_by="XM_041468613.1:76..732"
                     /db_xref="GeneID:121354186"
ORIGIN      
        1 megplpwgpt aagmsetpps kdaapaecpv cyerfhplea thrrlscght fchdclvkcl
       61 lsakldghvq ssivcpvcrf vtflsrkkal wppratdprs levplspssl sqlakseasn
      121 tlvvpshfvl perspercpa glareahifv isehgvplva aqdcgsprrs svslsvssgp
      181 alglqccqsp malavmlvlt vamlaavlpw lllvrrdl
//
LOCUS       XP_041324548             132 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphoinositide-interacting protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324548
VERSION     XP_041324548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="phosphoinositide-interacting protein"
                     /calculated_mol_wt=14675
     Region          5..132
                     /region_name="PIRT"
                     /note="Phosphoinositide-interacting protein family;
                     pfam15099"
                     /db_xref="CDD:434456"
     CDS             1..132
                     /gene="PIRT"
                     /coded_by="XM_041468614.1:1..399"
                     /db_xref="GeneID:121354188"
ORIGIN      
        1 memppkspdg sekspqskel itsstgstlc mssrsesvwt saprskwdiy hkplivvsvg
       61 vaiflfgvvi tslacfltkn kkvykmtgpa flslglmllv cglvwipiir kkqkqrqksq
      121 flqslksfff nr
//
LOCUS       XP_041324549             502 aa            linear   VRT 06-MAY-2021
DEFINITION  protoheme IX farnesyltransferase, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324549
VERSION     XP_041324549.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468615.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="protoheme IX farnesyltransferase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=55217
     Region          158..423
                     /region_name="PT_UbiA_Cox10"
                     /note="Protoheme IX farnesyltransferase; cd13957"
                     /db_xref="CDD:260120"
     CDS             1..502
                     /gene="LOC121354190"
                     /coded_by="XM_041468615.1:82..1590"
                     /db_xref="GeneID:121354190"
ORIGIN      
        1 msaarscrpp ralaglfvwh lrntgarqip crfvhlhhva snrlitfqyf nflkrmyvtq
       61 cnkdlsqrak pksdsvvspf helqqldqek kfvnkissvs pvhqswsems srkelreiks
      121 aaetedsvip vgaeskedrq wkemklrlhd lpgilarlsk ikltalvvst asagfamapv
      181 pfeitcflla slgtglasca ansinqffev pfdsnmnrtk nrplvrgqis pllavcfaas
      241 cgipgiallt lgvnpltgal gafniflytc cytplkrmsi antwvgavvg aippvmgwta
      301 atgsldagal llggilyswq fphfnalswg lredysrggy cmmsvthpgl crrvalrhcl
      361 aliglsavap vlnittwtfp vislpinlyi sylgfrfyrd adrsssrklf fcslwhlpml
      421 llvmftckks lvekedkgwq gvcalpgrch palhpallpg aaspaflqgr iapgrvwevp
      481 vaevgsdpsg wkkcsrtsyl qt
//
LOCUS       XP_041324551             465 aa            linear   VRT 06-MAY-2021
DEFINITION  protoheme IX farnesyltransferase, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324551
VERSION     XP_041324551.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468617.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="protoheme IX farnesyltransferase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=51238
     Region          158..423
                     /region_name="PT_UbiA_Cox10"
                     /note="Protoheme IX farnesyltransferase; cd13957"
                     /db_xref="CDD:260120"
     CDS             1..465
                     /gene="LOC121354190"
                     /coded_by="XM_041468617.1:82..1479"
                     /db_xref="GeneID:121354190"
ORIGIN      
        1 msaarscrpp ralaglfvwh lrntgarqip crfvhlhhva snrlitfqyf nflkrmyvtq
       61 cnkdlsqrak pksdsvvspf helqqldqek kfvnkissvs pvhqswsems srkelreiks
      121 aaetedsvip vgaeskedrq wkemklrlhd lpgilarlsk ikltalvvst asagfamapv
      181 pfeitcflla slgtglasca ansinqffev pfdsnmnrtk nrplvrgqis pllavcfaas
      241 cgipgiallt lgvnpltgal gafniflytc cytplkrmsi antwvgavvg aippvmgwta
      301 atgsldagal llggilyswq fphfnalswg lredysrggy cmmsvthpgl crrvalrhcl
      361 aliglsavap vlnittwtfp vislpinlyi sylgfrfyrd adrsssrklf fcslwhlpml
      421 llvmftckks lvekedkell agaglpvsls lkqlparfgd lsdcs
//
LOCUS       XP_041324552             454 aa            linear   VRT 06-MAY-2021
DEFINITION  protoheme IX farnesyltransferase, mitochondrial isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324552
VERSION     XP_041324552.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468618.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="protoheme IX farnesyltransferase, mitochondrial
                     isoform X3"
                     /calculated_mol_wt=50204
     Region          158..423
                     /region_name="PT_UbiA_Cox10"
                     /note="Protoheme IX farnesyltransferase; cd13957"
                     /db_xref="CDD:260120"
     CDS             1..454
                     /gene="LOC121354190"
                     /coded_by="XM_041468618.1:82..1446"
                     /db_xref="GeneID:121354190"
ORIGIN      
        1 msaarscrpp ralaglfvwh lrntgarqip crfvhlhhva snrlitfqyf nflkrmyvtq
       61 cnkdlsqrak pksdsvvspf helqqldqek kfvnkissvs pvhqswsems srkelreiks
      121 aaetedsvip vgaeskedrq wkemklrlhd lpgilarlsk ikltalvvst asagfamapv
      181 pfeitcflla slgtglasca ansinqffev pfdsnmnrtk nrplvrgqis pllavcfaas
      241 cgipgiallt lgvnpltgal gafniflytc cytplkrmsi antwvgavvg aippvmgwta
      301 atgsldagal llggilyswq fphfnalswg lredysrggy cmmsvthpgl crrvalrhcl
      361 aliglsavap vlnittwtfp vislpinlyi sylgfrfyrd adrsssrklf fcslwhlpml
      421 llvmftckks lvekedkgdl pggthemame irlp
//
LOCUS       XP_041324553             349 aa            linear   VRT 06-MAY-2021
DEFINITION  heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324553
VERSION     XP_041324553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..349
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..349
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     3B1-like"
                     /calculated_mol_wt=39212
     Region          96..337
                     /region_name="Sulfotransfer_1"
                     /note="Sulfotransferase domain; pfam00685"
                     /db_xref="CDD:425820"
     CDS             1..349
                     /gene="LOC121354191"
                     /coded_by="XM_041468619.1:126..1175"
                     /db_xref="GeneID:121354191"
ORIGIN      
        1 mgqrlnrcld vpvalpplrr rllllfimlf lwlymfysca gscaglttrg spapprsapp
       61 lpgepgeess leeqraapda gspissffng sgtkrlpqai iigvkkggtr alleflrvhp
      121 dvravgaeph ffdrnyergl awyrdlmprt legqitmekt psyfvtkeap arissmskgt
      181 klivvvrdpv traisdytqt lskkpdiptf esltfknrtt glidtswsai qigiyakhle
      241 nwllhfpigq ilfvsgerli sdpagelgrv qdflglkrii tdkhfyfnkt kgfpclkkae
      301 gsskphclgk tkgrthpdid qevvqrlrdf yrpfnmkfyq mtgqdfgwd
//
LOCUS       XP_041324554             843 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 43, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324554
VERSION     XP_041324554.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468620.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..843
                     /product="ubiquitin carboxyl-terminal hydrolase 43"
     Region          <28..650
                     /region_name="UBP12"
                     /note="Ubiquitin C-terminal hydrolase [Posttranslational
                     modification, protein turnover, chaperones]; COG5560"
                     /db_xref="CDD:227847"
     Region          <651..841
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..843
                     /gene="USP43"
                     /coded_by="XM_041468620.1:<1..2532"
                     /db_xref="GeneID:121354192"
ORIGIN      
        1 pgrgrsrprt kpparplrap hgtgtgerpp gaqglrnhgn tcfmnavvqc lsntaplaer
       61 lalgryrarg araevthrla alvralwtre ytpqlsaefk nivskhssqf rgsaqhdale
      121 fllwlldrmh edlgaaspaq qsrgpsqpgk dgssgasrsp pgtqhprgqs fvqshfqaqy
      181 rssltcphcl kqsntfdpfl cislpiplrq tralnvtlvl qcerwrfvrv glavpllgtv
      241 adlremvare grvpaeqvil aevsprgllr slsdpealra ageaapvyaf qppparragc
      301 prslptspav prpegprllp saarssdclh rapgsrilll lcntvgtgpq larfgpplvl
      361 reergvsweq lqqnilaqlr gvlrgevrpq gtgalfrirl agvsapwtyl spqdprplch
      421 paidralqlc gaggpphvrl tvewdtstke rlfgsiqeev vqdaesvwqq qqahgqqhsc
      481 tldecfqlyt keeqlapdda wrcphckvpq qgtvklslwt lpdiliihlk rfrqvaeqrh
      541 klttlvrfpl rgldmaphva qrgqpggqll grwapwqpsl rlppgcprdh lydlyavcnh
      601 hgsmqgghyt afccnaldgr wysyddsrve wvreaevstr sayilfyqrr raagsgtgsa
      661 aaaghwvfrl aasepradpr tdpdpsgsia apenggfear ppvrglqglh grslsvrtap
      721 agppgqgesg ppraprrlrr aasaegtprr pppgpgspgt agpqgdagvp pgrcppgpsa
      781 lgrsrssasl pprpeaglrr saslgrgpag pplvargppg atlqrgrqpp vplrppavpe
      841 ssf
//
LOCUS       XP_041324555             498 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome P450 2C5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324555
VERSION     XP_041324555.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468621.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="cytochrome P450 2C5-like"
                     /calculated_mol_wt=56546
     Region          65..473
                     /region_name="cytochrome_P450"
                     /note="cytochrome P450 (CYP) superfamily; cl41757"
                     /db_xref="CDD:477761"
     Site            order(124,128,135,182,297..298,301..302,305..306,309,360,
                     370,372,395,431..433,437..441,444..445)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410652"
     Site            order(208..209,297,300..301,305,368..371)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410652"
     CDS             1..498
                     /gene="LOC121354193"
                     /coded_by="XM_041468621.1:1..1497"
                     /db_xref="GeneID:121354193"
ORIGIN      
        1 mdagsagllv tlllllsvlw lllwrsdpkr srlppgpapw pilgnlwqkd vlplyrhyek
       61 lsstygpift vwlglkpvvv lcgyeavkda lvghseefgg rptipllmql sknygfvsdn
      121 ekkwrelrrf tlstlrdfgm gkssmsqkvq qeaqhlvell aklqgnafep mtmfrhavsn
      181 vicsvvfgsr ysysdaafle llnaignyis fflspvakvy ntfpsimdrl pgphkkvlad
      241 cqklkdhiqe kvqfhqltld sscprdyidc fliraekekg spetmysqed limsvfnlfg
      301 agtvttsntl vffllmlakh phiqakvqee idavvgtgra pctedklrmp ytnavihelq
      361 rfhkarienf prmttqdvlf rgysipkgtp vipvlssvhs dptqwenpke vdpkhfldek
      421 gefrkreafm afsagkrmcp gealarielf lflttllqnf tfqlatehre ldlfslwlei
      481 erraipgkff alprpvss
//
LOCUS       XP_041324556             730 aa            linear   VRT 06-MAY-2021
DEFINITION  nicastrin [Pyrgilauda ruficollis].
ACCESSION   XP_041324556
VERSION     XP_041324556.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468622.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="nicastrin"
                     /calculated_mol_wt=78556
     Region          75..675
                     /region_name="M28_Nicastrin"
                     /note="M28 Zn-peptidase nicastrin, a main component of
                     gamma-secretase complex; cd03881"
                     /db_xref="CDD:349877"
     Site            359..363
                     /site_type="other"
                     /note="DYIGS region"
                     /db_xref="CDD:349877"
     CDS             1..730
                     /gene="NCSTN"
                     /coded_by="XM_041468622.1:26..2218"
                     /db_xref="GeneID:121354194"
ORIGIN      
        1 maagpgrgsp gtgwsspgap wnsvaapwgs lgalrsslgv lrallvaala agccrgnsvh
       61 rkiyialnht apcvrllnat hqigcqssls gdtgvihvve keedlewala tgphppymil
      121 ldgslfsrev lmqlkgtsri sglavaaasp appggfspgl kcpndgfgvy seayvpqfah
      181 cngsqwnpgg sglshedfpf pifllqdane tqlikecfra hnvprgpgaa pqfplcamql
      241 lahmhaaast vtcmrrsslq safsinpeiv cdplldynvw sslqpinasg rlqpgqrlvl
      301 aatrvdshsf fwnvapgaea avgsfvalla aaqalqaapg sqqlprnvlf vffqgetfdy
      361 igssrlvfdm eqekfplrle niaaflelgq vslrnnsvlw mhtdpvsrrn esvesqvqel
      421 laalrssgsg snvslqepgv sqplppssfq rflrsrsipg vvlsdhraaf hnryfqsiyd
      481 taesigmryp eglspeqqle fvtdtaqala evatllaral ftlaggtagt esiradpktv
      541 trllygflln snnswfqsli kpdqkgilgp fpqhyvavss ptnttqllqa vlgnltgasv
      601 nlsreqcqdp gktpgtqpel yeywwvqgpl dgnsssripg cvrsavrlsp alspafelrr
      661 wdsrefstwt esrwkdirar iflvasrele lltlalgvlv lllsllctfl isskasllfg
      721 lpappgpsgy
//
LOCUS       XP_041324558             494 aa            linear   VRT 06-MAY-2021
DEFINITION  tektin-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324558
VERSION     XP_041324558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="tektin-3"
                     /calculated_mol_wt=56865
     Region          98..480
                     /region_name="Tektin"
                     /note="Tektin family; pfam03148"
                     /db_xref="CDD:460827"
     CDS             1..494
                     /gene="TEKT3"
                     /coded_by="XM_041468624.1:45..1529"
                     /db_xref="GeneID:121354195"
ORIGIN      
        1 melygyplka kfnqprpppp rvlpaantva ggyrnripyh sesfsmpwmp nsyykaaaln
       61 ptlspltesf pglpptkiip fiserpngvf trhtlddwhr snltnykese ttrhnaerlr
      121 adltrtikdv yqqakrtqge stknlgerin dieywkselc ieldamiret nslmdmqkrl
      181 eraladtegp fqvahkclln rekrmgidlv sddvekqlit eikiirscre rlqqcldtvn
      241 aqimcnkear qelekdladk qlghhidnkc yqlkntsrgi hffkgverid atvsvpetwa
      301 rftdnnifrs qsaratsakl rastesllmg tademwrqfs kvndaftsri teianakski
      361 qthlaktrqe ifqletkiqv iqktirdkev qlkvaqtrld ertrrpnvel crdaaqlrlv
      421 qevneinetl rnlhqclras edmlqmlvrs kgvlehdlvv knnslfidqe rcmgmrksyp
      481 stvqilgyvs aglt
//
LOCUS       XP_041324559             158 aa            linear   VRT 06-MAY-2021
DEFINITION  peripheral myelin protein 22 [Pyrgilauda ruficollis].
ACCESSION   XP_041324559
VERSION     XP_041324559.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468625.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..158
                     /product="peripheral myelin protein 22"
                     /calculated_mol_wt=17411
     Region          1..151
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..158
                     /gene="PMP22"
                     /coded_by="XM_041468625.1:152..628"
                     /db_xref="GeneID:121354196"
ORIGIN      
        1 mlllllgiiv lhvtvlvllf vstivsqwlv ngehaadlwq nctsgspfqc lasssnewlq
       61 svqammilsv ifsvlslflf fcqlftltkg grfyitgvfq ilaglcvmsg aaiftvrhtd
      121 whqasentsy gfayilawla fplalasgiv yvilrkre
//
LOCUS       XP_041324560             158 aa            linear   VRT 06-MAY-2021
DEFINITION  peripheral myelin protein 22 [Pyrgilauda ruficollis].
ACCESSION   XP_041324560
VERSION     XP_041324560.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468626.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..158
                     /product="peripheral myelin protein 22"
                     /calculated_mol_wt=17411
     Region          1..151
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..158
                     /gene="PMP22"
                     /coded_by="XM_041468626.1:311..787"
                     /db_xref="GeneID:121354196"
ORIGIN      
        1 mlllllgiiv lhvtvlvllf vstivsqwlv ngehaadlwq nctsgspfqc lasssnewlq
       61 svqammilsv ifsvlslflf fcqlftltkg grfyitgvfq ilaglcvmsg aaiftvrhtd
      121 whqasentsy gfayilawla fplalasgiv yvilrkre
//
LOCUS       XP_041324561             358 aa            linear   VRT 06-MAY-2021
DEFINITION  signaling lymphocytic activation molecule [Pyrgilauda ruficollis].
ACCESSION   XP_041324561
VERSION     XP_041324561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="signaling lymphocytic activation molecule"
                     /calculated_mol_wt=38511
     Region          22..123
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          33..37
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          46..54
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          89..93
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          103..108
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          116..119
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..358
                     /gene="SLAMF1"
                     /coded_by="XM_041468627.1:220..1296"
                     /db_xref="GeneID:121354197"
ORIGIN      
        1 mgsgawlqll ltlgalwgig aketvlgilg eatllripre lqerteqfge aswkkiikep
       61 ltkkflvkis grnhsefqpe rmrfreqnfs leilntsrdd qrlyeysvnk gseeevwqiq
      121 levfepvadp sirilhress ngscslalnc ssergdnvsy swdgrdngtg gicsgngsvl
      181 rlsfplrsaa fgcvctarnp vssrhaafda ahcgseqrgv prvrtellvp lvvlgvivii
      241 iiivimaivt sratcsakrd pdpsqitpdp sqvtpdpsqv tpasatiyaq vqrvqkpkgt
      301 vpsatalsct tiytaatgpp papdgaprsp agsptprgrp plsqepttvy asvtlpva
//
LOCUS       XP_041324562             240 aa            linear   VRT 06-MAY-2021
DEFINITION  T-lymphocyte surface antigen Ly-9-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324562
VERSION     XP_041324562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..240
                     /product="T-lymphocyte surface antigen Ly-9-like"
                     /calculated_mol_wt=25508
     Region          11..106
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          21..26
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          36..40
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          75..79
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          89..94
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          98..101
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..240
                     /gene="LOC121354198"
                     /coded_by="XM_041468628.1:137..859"
                     /db_xref="GeneID:121354198"
ORIGIN      
        1 mallarasdt teviqllggs vtlrslnadg ntdgnaivwf fgnepivtve lkdpfqpvfh
       61 keefqghfav seggralsis qlrmedagiy svkigdetst ftlqvfgela eptvtceaqn
      121 csdgscsfsl rcsvpgaglg nvsyswrvrd rpqdggsvvl wvnessreep epltctarnp
      181 vssrnvtvtt pgvlcsantt hppspgahsg swirigviag vevasllsif lvfyckskgh
//
LOCUS       XP_041324563             209 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi apparatus membrane protein TVP23 homolog B-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324563
VERSION     XP_041324563.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468629.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="Golgi apparatus membrane protein TVP23 homolog
                     B-like isoform X1"
                     /calculated_mol_wt=23423
     Region          34..176
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..209
                     /gene="LOC121354199"
                     /coded_by="XM_041468629.1:16..645"
                     /db_xref="GeneID:121354199"
ORIGIN      
        1 mhsdpedssd diedvslfda dddvsrrskk skirhpvasf fhlffrvsai vvyllcellt
       61 ssfiacmvti illlscdfwa vknvtgrlmv glrwwnqvdd dgrshwvfea rkvsaqggkt
      121 sseaesrifw lglitcpmiw vifafsalfs fkvkwlavvv mgvvlqganl ygyvrckvgs
      181 rknltsmats ylgkqflrqt vatedqaas
//
LOCUS       XP_041324564             179 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi apparatus membrane protein TVP23 homolog B-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324564
VERSION     XP_041324564.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468630.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="Golgi apparatus membrane protein TVP23 homolog
                     B-like isoform X2"
                     /calculated_mol_wt=19812
     Region          34..146
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..179
                     /gene="LOC121354199"
                     /coded_by="XM_041468630.1:2..541"
                     /db_xref="GeneID:121354199"
ORIGIN      
        1 mhsdpedssd diedvslfda dddvsrrskk skirhpvasf fhlffrvsai vvyllcellt
       61 ssfiacmvti illlscdfwa vkvsaqggkt sseaesrifw lglitcpmiw vifafsalfs
      121 fkvkwlavvv mgvvlqganl ygyvrckvgs rknltsmats ylgkqflrqt vatedqaas
//
LOCUS       XP_041324566             204 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi apparatus membrane protein TVP23 homolog B-like isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324566
VERSION     XP_041324566.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468632.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="Golgi apparatus membrane protein TVP23 homolog
                     B-like isoform X3"
                     /calculated_mol_wt=22858
     Region          29..171
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..204
                     /gene="LOC121354199"
                     /coded_by="XM_041468632.1:439..1053"
                     /db_xref="GeneID:121354199"
ORIGIN      
        1 mdssddiedv slfdadddvs rrskkskirh pvasffhlff rvsaivvyll celltssfia
       61 cmvtiillls cdfwavknvt grlmvglrww nqvdddgrsh wvfearkvsa qggktsseae
      121 srifwlglit cpmiwvifaf salfsfkvkw lavvvmgvvl qganlygyvr ckvgsrknlt
      181 smatsylgkq flrqtvated qaas
//
LOCUS       XP_041324567             143 aa            linear   VRT 06-MAY-2021
DEFINITION  Golgi apparatus membrane protein TVP23 homolog B-like isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324567
VERSION     XP_041324567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..143
                     /product="Golgi apparatus membrane protein TVP23 homolog
                     B-like isoform X4"
                     /calculated_mol_wt=15932
     Region          <1..110
                     /region_name="DUF846"
                     /note="Eukaryotic protein of unknown function (DUF846);
                     pfam05832"
                     /db_xref="CDD:461754"
     CDS             1..143
                     /gene="LOC121354199"
                     /coded_by="XM_041468633.1:433..864"
                     /db_xref="GeneID:121354199"
ORIGIN      
        1 mvtiilllsc dfwavknvtg rlmvglrwwn qvdddgrshw vfearkvsaq ggktsseaes
       61 rifwlglitc pmiwvifafs alfsfkvkwl avvvmgvvlq ganlygyvrc kvgsrknlts
      121 matsylgkqf lrqtvatedq aas
//
LOCUS       XP_041324568             521 aa            linear   VRT 06-MAY-2021
DEFINITION  vang-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324568
VERSION     XP_041324568.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468634.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..521
                     /product="vang-like protein 2"
                     /calculated_mol_wt=59911
     Region          24..521
                     /region_name="Strabismus"
                     /note="Strabismus protein; pfam06638"
                     /db_xref="CDD:461971"
     CDS             1..521
                     /gene="VANGL2"
                     /coded_by="XM_041468634.1:462..2027"
                     /db_xref="GeneID:121354200"
ORIGIN      
        1 mdnesqysgy syksghsrss rkhrdrrerh rsksrdgtrg dksvtiqapg eplldnestr
       61 gderddnwge tttvvtgtse hsishddltr itkdmedsah ldcsrhlgva lgvalallaf
      121 ltplaflllp qllwreelep cgtpceglfi svafkllill lgswalffrr pkaffprvfv
      181 frallmvlvf llvvsywlfy gvrildsrdr nyrgvvqfav slvdallfvh ylavvllelr
      241 qlqpqftlka vrsadgasrf ynvghlsiqr aavwilenyy hdfpvynpal lnlpksvlsk
      301 kmsgfkvysl geenstnnst gqsraviaaa arrrdnshne fyyeeaeher rvrkrrarlv
      361 vaveeafthi krlqeedqkn preimdprea aqaifasmar amqkylrttk qqpyhtmesi
      421 lqhlefcith dmtpkafler yltagptiqy hkdrwlakqw tlvseepvtn glkdgvvfvl
      481 krqdfslvvs tkkipffkls eefvdpkshk fimrlqsets v
//
LOCUS       XP_041324569             521 aa            linear   VRT 06-MAY-2021
DEFINITION  vang-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324569
VERSION     XP_041324569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..521
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..521
                     /product="vang-like protein 2"
                     /calculated_mol_wt=59911
     Region          24..521
                     /region_name="Strabismus"
                     /note="Strabismus protein; pfam06638"
                     /db_xref="CDD:461971"
     CDS             1..521
                     /gene="VANGL2"
                     /coded_by="XM_041468635.1:395..1960"
                     /db_xref="GeneID:121354200"
ORIGIN      
        1 mdnesqysgy syksghsrss rkhrdrrerh rsksrdgtrg dksvtiqapg eplldnestr
       61 gderddnwge tttvvtgtse hsishddltr itkdmedsah ldcsrhlgva lgvalallaf
      121 ltplaflllp qllwreelep cgtpceglfi svafkllill lgswalffrr pkaffprvfv
      181 frallmvlvf llvvsywlfy gvrildsrdr nyrgvvqfav slvdallfvh ylavvllelr
      241 qlqpqftlka vrsadgasrf ynvghlsiqr aavwilenyy hdfpvynpal lnlpksvlsk
      301 kmsgfkvysl geenstnnst gqsraviaaa arrrdnshne fyyeeaeher rvrkrrarlv
      361 vaveeafthi krlqeedqkn preimdprea aqaifasmar amqkylrttk qqpyhtmesi
      421 lqhlefcith dmtpkafler yltagptiqy hkdrwlakqw tlvseepvtn glkdgvvfvl
      481 krqdfslvvs tkkipffkls eefvdpkshk fimrlqsets v
//
LOCUS       XP_041324570             761 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/WD repeat-containing protein 10-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324570
VERSION     XP_041324570.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468636.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..761
                     /product="F-box/WD repeat-containing protein 10-like"
                     /calculated_mol_wt=83940
     Region          18..57
                     /region_name="F-box_SF"
                     /note="F-box domain superfamily; cl45894"
                     /db_xref="CDD:459239"
     Site            order(22..23,25..27,30..31,34,45..47,49,52)
                     /site_type="other"
                     /note="F-box motif"
                     /db_xref="CDD:438852"
     Site            order(22,26,29..30,33..34,38,40..41,45..47,49)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438852"
     Region          <167..418
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          200..237
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..277
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          285..315
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          321..354
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          362..396
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <435..703
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..761
                     /gene="LOC121354201"
                     /coded_by="XM_041468636.1:1..2286"
                     /db_xref="GeneID:121354201"
ORIGIN      
        1 mvpaslpsgs dvsqpkdftr vlpfqlsvai lglldhksld acsavnghwe flvrrlqedk
       61 ecwstvhknl lqlqelcprk tmpnyakrvd vqipqlddeg evievkdkeq kkrrkskted
      121 fglhetyqel ktqkieleer nvfcgpyktc vlmeqsdsrr rahysggdwv aaasrrvrll
      181 rvpggkqepl llrghagpvt alclredkgl llsstsleps ircwnihsga cvrtltghya
      241 aitclqshqe qlvsgagdgm vkvwslksgk clrtlmhgsp vgavrmdgth vvsgghqglv
      301 kvwsaetgal iktlerhqgp vlclsfdqwh lvtgssdgya lgwsmlgkfr rcliaffhpk
      361 evlsleflyl rvisgcadgc irifnfltgs clkvlepsgs rdpvsalfva gnrlvtnsps
      421 rllllqfedv lwdyslpadr evlkqdrrsq kgkrqgagae qqraqdkspr srqgpkshgr
      481 pksdeaeqgp aspapeeaea tlerelpqrd prsplspdkf lltigrlqsf ckpaaasrsp
      541 sllsakgraa qqqrpgevpl pstalqhree raaqlqrarl hsrsltatki stpfgsktlr
      601 lrlenslhsp alkssipapr vvspkfcgsl gerktpsghg kdplgptdwd qlidlctass
      661 eliqptpgta aemrngaarr ikpscpvasr rdsglrllta eqevreaala aqhqaqqakp
      721 tedkdrarrk awlrkmkglp vdsftgerkt papelghntf i
//
LOCUS       XP_041324571             587 aa            linear   VRT 06-MAY-2021
DEFINITION  rho GTPase-activating protein 44 [Pyrgilauda ruficollis].
ACCESSION   XP_041324571
VERSION     XP_041324571.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468637.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="rho GTPase-activating protein 44"
                     /calculated_mol_wt=65280
     Region          13..255
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(21,24..25,32,33,36,65..66,68..69,72..73,75..76,79,
                     93,96..97,197,200..201,203,207,210..211,213..214,217..218,
                     221..222,224..225,228..229,231..232)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     Region          244..444
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cl02570"
                     /db_xref="CDD:470621"
     Site            order(286,323,327,396,399..400,426)
                     /site_type="other"
                     /note="GTPase interaction site"
                     /db_xref="CDD:238090"
     Site            286
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     CDS             1..587
                     /gene="ARHGAP44"
                     /coded_by="XM_041468637.1:1..1764"
                     /db_xref="GeneID:121354202"
ORIGIN      
        1 mkkqfnrmrq lanqtvgrae ktevlsedll qvrlprshpg vdpgirgirg sggnaapvsl
       61 qkklplttla qclmegsavl gddsllgkml rlcgeaedkl aqelihfelq verdvieplf
      121 vlaeveipni qkqrkhlakl vldmdssrtr wqqsvkssgl asnlqpsgak adalreemee
      181 aanrveicrd qlsadmynfv akevdyanyf qtlievqaey hrkslallqn flpqikaqqe
      241 awmekpsfgk pleehlavsg reiafpveac vtmllecgmq eeglfrvaps asklkklkaa
      301 ldccvvdvqe ysadphaiag alksylrelp eplmtfelye ewiqasnipe qekrlqalwn
      361 aceklpkany nniryvikfl aklteyqdmn kmtpsnvaiv lgpnllwpqa egnmtemmtt
      421 lslqivgiie pliqhadwff pgdiefnvtg nygsplhvnh nanyssmpsp dmehgerrqh
      481 eqarrplsva tdnmmlefck kdglrkiqsm gvrvmdtswv arrgtsagrk aasappaaqp
      541 pappaelppt phspipeqsp eisatpsppp tsfgfppaae rtrsapf
//
LOCUS       XP_041324572             157 aa            linear   VRT 06-MAY-2021
DEFINITION  chromatin-remodeling ATPase INO80-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324572
VERSION     XP_041324572.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468638.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..157
                     /product="chromatin-remodeling ATPase INO80-like"
                     /calculated_mol_wt=16445
     Region          43..>76
                     /region_name="CDRT4"
                     /note="CMT1A duplicated region transcript 4 protein;
                     pfam15213"
                     /db_xref="CDD:434540"
     CDS             1..157
                     /gene="LOC121354203"
                     /coded_by="XM_041468638.1:1..474"
                     /db_xref="GeneID:121354203"
ORIGIN      
        1 masflktile pseedafdhl twmekpsvis isgglssede lpspnvglps aliprqppgp
       61 ayvthtgplv rrlrqqdglg aaapdplptp epalhplhse prprselsts ptpehppgap
      121 edaqtsalpg vchmvifark ppsstlppss pcsshge
//
LOCUS       XP_041324573             265 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: CD48 antigen [Pyrgilauda ruficollis].
ACCESSION   XP_041324573
VERSION     XP_041324573.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468639.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 3% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..265
                     /product="LOW QUALITY PROTEIN: CD48 antigen"
                     /calculated_mol_wt=28677
     Region          30..128
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          55..60
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          93..96
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          106..111
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          120..123
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..265
                     /gene="CD48"
                     /coded_by="XM_041468639.1:147..944"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121354204"
ORIGIN      
        1 malglapnll lfllfllfta pawaeepppl evtgavgrva flnprspqnp lkysqihwcw
       61 enqlriasrk rgeeptypps hfrgrlelld nstlkmsplg lgdsgeyhly lexdtgrqsi
      121 qkvqlqvydl vpkprvtatt ngdpqqcnat lscsvglqgv tyewipppka lmkegpvlev
      181 sfsptvdtyv crvsnpvsss nasltfrppc swtgtatagh stregwpglw gvptgvwgas
      241 gdsqsdptel fglgrssevi gpmwg
//
LOCUS       XP_041324574             129 aa            linear   VRT 06-MAY-2021
DEFINITION  helix-loop-helix protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324574
VERSION     XP_041324574.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468640.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="helix-loop-helix protein 1"
                     /calculated_mol_wt=15745
     Region          <105..128
                     /region_name="bHLH_SF"
                     /note="basic Helix Loop Helix (bHLH) domain superfamily;
                     cl00081"
                     /db_xref="CDD:469605"
     CDS             1..129
                     /gene="NHLH1"
                     /coded_by="XM_041468640.1:1..390"
                     /db_xref="GeneID:121354206"
ORIGIN      
        1 msragskpwe yreekprslg mlrdsgegsg dedeeededk ikmrgrmrmk kmrmkkklrm
       61 gmrmmrkkrr rmkidkdkdk ikrrrrmkvq nmmkkklrmg mrmmrklski eilrlaicyi
      121 sylnhvldv
//
LOCUS       XP_041324575             334 aa            linear   VRT 06-MAY-2021
DEFINITION  T-lymphocyte surface antigen Ly-9-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324575
VERSION     XP_041324575.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468641.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="T-lymphocyte surface antigen Ly-9-like isoform
                     X1"
                     /calculated_mol_wt=35627
     Region          25..117
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          35..39
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          86..90
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..105
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          109..112
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..334
                     /gene="LOC121354207"
                     /coded_by="XM_041468641.1:132..1136"
                     /db_xref="GeneID:121354207"
ORIGIN      
        1 mdvfwiplla iltllhptts tsdptevigv lggsvtfhth ntggkpalwf fgteaimtvv
       61 fedpprrpvf hkdefktrfa vsengralsi sqlrmedagt ysvtidgkks tftlqvfrel
      121 aeptvtceaq ncsdgscsfs lrcsvpgagl gnvsyswrvr drpqdggsvv lwvnessree
      181 pepltctarn pvssrnvtvt tpgvlcsgal sssqvgvrgg vvivvgilva aflslclvfl
      241 gkskgwrkfh lsnskpadta atdyttvyae vgpsqqhrai khlkivlpqg vpngmkakpt
      301 dggsattiys lvkrpeqadd gtaenaavtg lelv
//
LOCUS       XP_041324576             321 aa            linear   VRT 06-MAY-2021
DEFINITION  T-lymphocyte surface antigen Ly-9-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324576
VERSION     XP_041324576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="T-lymphocyte surface antigen Ly-9-like isoform
                     X2"
                     /calculated_mol_wt=34092
     Region          25..117
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          35..39
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          86..90
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..105
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          109..112
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..321
                     /gene="LOC121354207"
                     /coded_by="XM_041468642.1:132..1097"
                     /db_xref="GeneID:121354207"
ORIGIN      
        1 mdvfwiplla iltllhptts tsdptevigv lggsvtfhth ntggkpalwf fgteaimtvv
       61 fedpprrpvf hkdefktrfa vsengralsi sqlrmedagt ysvtidgkks tftlqvfrel
      121 aeptvtceaq ncsdgscsfs lrcsvpgagl gnvsyswrvr drpqdggsvv lwvnessree
      181 pepltctarn pvssrnvtvt tpgvlcsgal sssqvgvrgg vvivvgilva aflslclvfl
      241 gkskgwrkfh lsnskpadta atdyttvyae vgpsqqgvpn gmkakptdgg sattiyslvk
      301 rpeqaddgta enaavtglel v
//
LOCUS       XP_041324578             129 aa            linear   VRT 06-MAY-2021
DEFINITION  bestrophin-2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324578
VERSION     XP_041324578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468644.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521652.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>129
                     /product="bestrophin-2-like"
     Region          <1..>121
                     /region_name="Bestrophin"
                     /note="RFP-TM, chloride channel; cl01544"
                     /db_xref="CDD:470246"
     CDS             1..129
                     /gene="LOC121354208"
                     /coded_by="XM_041468644.1:<1..>389"
                     /codon_start=3
                     /db_xref="GeneID:121354208"
ORIGIN      
        1 fyvalvlerw wgqfrtvpap dglmvavass vrgsdprgrl lrrtllrygs laallvlrav
       61 stpvykrfpt tdhlvqagfl treerrrleg lrspynkfwv pcvwfgalag rarregrigd
      121 dcalkllme
//
LOCUS       XP_041324579             169 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 14J1-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324579
VERSION     XP_041324579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521674.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..169
                     /product="olfactory receptor 14J1-like"
     Region          <10..151
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          53..76
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          95..117
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          126..151
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..169
                     /gene="LOC121354209"
                     /coded_by="XM_041468645.1:<1..510"
                     /db_xref="GeneID:121354209"
ORIGIN      
        1 iviklyslaf lysllhtant fslplchgna lgqffcevpq ilklscsksy lrelgflvfs
       61 iflvfgcfvf ivfsyvqifr avlripseqg whkafstclp hlavvslfis tavfaylkpp
      121 sisspsldva lsvlysvvpp alnpliyslr nqelkaavrr lmtgcfqeh
//
LOCUS       XP_041324580             191 aa            linear   VRT 06-MAY-2021
DEFINITION  serpin B6-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324580
VERSION     XP_041324580.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468646.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521685.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..191
                     /product="serpin B6-like"
     Region          <1..188
                     /region_name="serpin"
                     /note="SERine Proteinase INhibitors (serpin) family;
                     cl38926"
                     /db_xref="CDD:476815"
     Site            order(141..151,169)
                     /site_type="other"
                     /note="reactive center loop (RCL)"
                     /db_xref="CDD:381072"
     CDS             1..191
                     /gene="LOC121354210"
                     /coded_by="XM_041468646.1:<1..576"
                     /db_xref="GeneID:121354210"
ORIGIN      
        1 netrpvqmmf keadfnmtyi gdfqtkilel pyvgnelsmi illpdaiqdg stglerlere
       61 ltyeklmhwi spkmmsstev kvslprfkle enydlkplls smgmpdafdl gkadfsgisp
      121 gnqlvlseai hksfvevnee gteaaaatam licessfmmp tsefiadhpf lffirhnkts
      181 sllfcgrfcc p
//
LOCUS       XP_041324581             292 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/calcium exchanger 2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324581
VERSION     XP_041324581.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468647.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521729.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..292
                     /product="sodium/calcium exchanger 2-like"
     Region          <1..292
                     /region_name="caca"
                     /note="sodium/calcium exchanger 1; TIGR00845"
                     /db_xref="CDD:273296"
     CDS             1..292
                     /gene="LOC121354213"
                     /coded_by="XM_041468647.1:<1..881"
                     /codon_start=3
                     /db_xref="GeneID:121354213"
ORIGIN      
        1 dgeralsaee eearriadmg kpvlgdnrrl evvieesydf kntvdklmkk tnlatvigth
       61 swreqfleai tvsaggdede ddegreerlp scfdyvmhfl tvfwkvlfac vpptallggw
      121 aafgvsilll alltaligdl aahfgctlgl kdsvnavvfv algtsipdtf asrvaalqdp
      181 cadasignvt gsnavnvflg lglawsvaav ywaaqgrpfr vppgtlafpv tlftifafla
      241 igvllwrrra piggelggpr apkiltaglf lllwllyvlf asleaychiq gf
//
LOCUS       XP_041324582             212 aa            linear   VRT 06-MAY-2021
DEFINITION  hormone-sensitive lipase-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324582
VERSION     XP_041324582.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468648.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521751.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 25% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>212
                     /product="hormone-sensitive lipase-like"
     Region          82..>190
                     /region_name="alpha/beta hydrolases"
                     /note="A functionally diverse superfamily containing
                     proteases, lipases, peroxidases, esterases, epoxide
                     hydrolases and dehalogenases. The catalytic apparatus
                     typically involves three residues (catalytic triad): a
                     serine, a glutamate or aspartate and a...; cl21494"
                     /db_xref="CDD:473884"
     CDS             1..212
                     /gene="LOC121354214"
                     /coded_by="XM_041468648.1:<1..>636"
                     /db_xref="GeneID:121354214"
ORIGIN      
        1 dsaalsaltr qdggpwtpsp fpwrrgpplp pspgllvhfh gggfvdsaal saltrqdggp
       61 wtpspfpwrr gpplppspgl lvhfhgggfv aqtsrshepy lrgwardlgt pilsvdyala
      121 peapfprale ecfyaycwal rhcrmlgsta ervcvagdsa ggnlclgvsl ravalgvrvp
      181 qavvaaypvt lvraaaspsr lltlmdpllp lg
//
LOCUS       XP_041324583             799 aa            linear   VRT 06-MAY-2021
DEFINITION  cadherin-8 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324583
VERSION     XP_041324583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..799
                     /product="cadherin-8 isoform X1"
                     /calculated_mol_wt=88017
     Region          87..165
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          171..272
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(178..179,233,235,268,270..271)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          281..387
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(287..288,344,346,384,386..387)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          395..492
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(402..403,455,457,488,490..491)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          501..597
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          732..790
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     CDS             1..799
                     /gene="CDH8"
                     /coded_by="XM_041468649.1:530..2929"
                     /db_xref="GeneID:121354216"
ORIGIN      
        1 mperltemlt dtwtpliilw itvlpsiyma pmnqsqvlps gsstglkrln eeqrvlhrsk
       61 rgwvwnqmfv leefsgpepi lvgrlhtdld pgsskikyil sgdgagtifv indktgdiha
      121 mkrldreeka eytltaqavd rdtnqplepp sefiikvqdi ndnapefveg pyhatvpems
      181 vvgtfvtkvt atdaddpvyg nsaklvysil egqpyfsiep htaiiktalp nmdreakeey
      241 fvviqakdmg ghmgglsgtt tvtitlsdvn dnppkfaqsl yhfsvmedva lgepigrvka
      301 ndldigenak ssydiiegdg mdvfeittda qtqdgiirvr kpldfetkks ytlkveaani
      361 hidprflsgg pfkdtatvki vvedadeppv fssptyllev henaalnsvl gqvtahdpdv
      421 ssspirfsid rhtdlerqfn inaedgkitl atpldretst whnitivate trnhsqvsrv
      481 pvaikvldvn dnapefaseh eaflcengkp gqviqivsav dkddpknghy flysllpemv
      541 nnpnftikkn edntlsilak hsgfsrqkqe vyllpivisd sgtppmsstg tltirvcgcs
      601 sdgtvqscna eayvlpigls mgaliailac iilllvivvl fvtlrrhkne pliikddedv
      661 reniirydde gggeedteaf diatlqnpdg ingflprkdi kpdlqfmprq glapvpngvd
      721 vdefinvrlh eadndptapp ydsiqiygye gkgsaagsls slesstsdsd qnfdylsewg
      781 prfkrlgely svgesdket
//
LOCUS       XP_041324584             692 aa            linear   VRT 06-MAY-2021
DEFINITION  cadherin-8 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324584
VERSION     XP_041324584.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468650.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..692
                     /product="cadherin-8 isoform X2"
                     /calculated_mol_wt=75780
     Region          20..98
                     /region_name="CA"
                     /note="Cadherin repeats; smart00112"
                     /db_xref="CDD:214520"
     Region          174..280
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(180..181,237,239,277,279..280)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          288..385
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(295..296,348,350,381,383..384)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          394..490
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          625..683
                     /region_name="CADH_Y-type_LIR"
                     /note="Cadherin, Y-type LIR-motif; pfam01049"
                     /db_xref="CDD:460041"
     CDS             1..692
                     /gene="CDH8"
                     /coded_by="XM_041468650.1:19..2097"
                     /db_xref="GeneID:121354216"
ORIGIN      
        1 mfvleefsgp epilvgrlht dldpgsskik yilsgdgagt ifvindktgd ihamkrldre
       61 ekaeytltaq avdrdtnqpl eppsefiikv qdindnapef vegpyhatvp emsvvaiikt
      121 alpnmdreak eeyfvviqak dmgghmggls gtttvtitls dvndnppkfa qslyhfsvme
      181 dvalgepigr vkandldige nakssydiie gdgmdvfeit tdaqtqdgii rvrkpldfet
      241 kksytlkvea anihidprfl sggpfkdtat vkivvedade ppvfssptyl levhenaaln
      301 svlgqvtahd pdvssspirf sidrhtdler qfninaedgk itlatpldre tstwhnitiv
      361 atetskclsv srvpvaikvl dvndnapefa seheaflcen gkpgqviqiv savdkddpkn
      421 ghyflysllp emvnnpnfti kknedntlsi lakhsgfsrq kqevyllpiv isdsgtppms
      481 stgtltirvc gcssdgtvqs cnaeayvlpi glsmgaliai laciilllvi vvlfvtlrrh
      541 knepliikdd edvreniiry ddegggeedt eafdiatlqn pdgingflpr kdikpdlqfm
      601 prqglapvpn gvdvdefinv rlheadndpt appydsiqiy gyegkgsaag slsslessts
      661 dsdqnfdyls ewgprfkrlg elysvgesdk et
//
LOCUS       XP_041324585             217 aa            linear   VRT 06-MAY-2021
DEFINITION  hypoxanthine-guanine phosphoribosyltransferase-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324585
VERSION     XP_041324585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="hypoxanthine-guanine
                     phosphoribosyltransferase-like isoform X1"
                     /calculated_mol_wt=24901
     Region          13..217
                     /region_name="PRTases_typeI"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     cl00309"
                     /db_xref="CDD:444823"
     Site            order(68,70,133..135,137..141,165)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..217
                     /gene="LOC121354217"
                     /coded_by="XM_041468651.1:1..654"
                     /db_xref="GeneID:121354217"
ORIGIN      
        1 mltrnpklli rdeesgynkn lfcipkhyee dlervfiphg lildrterla rdimqdmgsh
       61 hivalcvlkg gykffadlld hikalnqngd ksvpvtvdfv riksycndsp akkvsfvgee
      121 lstlkgknvl vvediietgr tmkallskik dekprmvkvv sllvkrtcqs pgyrpdytgf
      181 eipdkfvvgy aldyneyfrd lnhicilken akekyrm
//
LOCUS       XP_041324586             214 aa            linear   VRT 06-MAY-2021
DEFINITION  hypoxanthine-guanine phosphoribosyltransferase-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324586
VERSION     XP_041324586.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468652.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..214
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..214
                     /product="hypoxanthine-guanine
                     phosphoribosyltransferase-like isoform X2"
                     /calculated_mol_wt=24471
     Region          10..214
                     /region_name="PRTases_typeI"
                     /note="Phosphoribosyl transferase (PRT)-type I domain;
                     cl00309"
                     /db_xref="CDD:444823"
     Site            order(65,67,130..132,134..138,162)
                     /site_type="active"
                     /db_xref="CDD:206754"
     CDS             1..214
                     /gene="LOC121354217"
                     /coded_by="XM_041468652.1:1..645"
                     /db_xref="GeneID:121354217"
ORIGIN      
        1 mahglqirde esgynknlfc ipkhyeedle rvfiphglil drterlardi mqdmgshhiv
       61 alcvlkggyk ffadlldhik alnqngdksv pvtvdfvrik sycndspakk vsfvgeelst
      121 lkgknvlvve diietgrtmk allskikdek prmvkvvsll vkrtcqspgy rpdytgfeip
      181 dkfvvgyald yneyfrdlnh icilkenake kyrm
//
LOCUS       XP_041324588            1227 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 18
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324588
VERSION     XP_041324588.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468654.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1227
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 18 isoform X1"
                     /calculated_mol_wt=136167
     Region          65..204
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          296..497
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(439..440,443,449)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          514..581
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          595..647
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          651..751
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          755..862
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          886..935
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          938..994
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          998..1054
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1062..1121
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1133..1179
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1194..1224
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1227
                     /gene="ADAMTS18"
                     /coded_by="XM_041468654.1:156..3839"
                     /db_xref="GeneID:121354219"
ORIGIN      
        1 mdclllavwt lpaailggss mqfqtlpwlg stvktlqlcc lccmshaatl tsdsiselth
       61 dyvfvtpvrv dasgsyishd vlhstrrkrs tqssksslhy kfsafgqelh lelkpstils
      121 nsfivqvlgk dgvsnsqdhe ieqcfyqgfi rndstssvai stcvglsgli rtrqmeflis
      181 plpqqlareh nytcpaghhp hvlykrtaeg kvhrspaqph pkscpsgrrr arashahpar
      241 asgyrhgrfq kqhfcgrrkk yapqppteet yirsdeygts arfkrssaki qkngslnvet
      301 lvvadkkmle khgkenvtty iltvmnmvss lfkdgtigsd iniivvslll leqepgglli
      361 nhhadqslns fcqwqsalvg kngkrhdhai lltgfdicsw knepcdtlgf apisgmcsky
      421 rsctinedtg lglaftiahe sghnfgmihd gegnacrkae gnimsptltg nngvfswsvc
      481 srqylnkfls taqaaclide pkqtgqykyp dklpgqiyda dtqckwqfgm kaklcnlsfv
      541 kdickslwch kvghrcetkf mpaaegtacg ismwcrrgqc vrygehgpkp vhgqwsawsq
      601 wsectrtcga gvtyqerhcn npkpqyggkf cqgssrvyql cnkqpcpags ldfralqcae
      661 ynskpfrgwf ykwkpytkve eqdrcklyct aedfdfffam sskvkdgtlc spnnydvcid
      721 giceqvgcdh glgskavlda cgvckgdnst ckffkgqylt qhkandyyav vtvpagarsi
      781 qlqelhisps ylavrslasr yyltgdwtid wpgkfpfagt vfdyqrsfnh peslyaagpt
      841 netlvfeill qgknpgiswe ytfakssien ktsvrkhsys wvtvqsecsa tcggghitak
      901 aicledhhar vntsfcgprt kplmetklcn tnpcpaywsa gewstcsksc gggqqsrlvq
      961 cvqkrafqre evvahslcpv stpaqvqvcs gqdcppewsp gpwsqcsktc grgikkrdvy
     1021 ckspgspkvk ilpesmcstd pkpesqqtcv lgrcpkndrl qwvisswsec sascgpglrq
     1081 relkcgeksi qgklvtfpqr rcrnikkpnt sleeacnkga cpsqtlynmv sgwysspwqq
     1141 ctvtcgggvq trsvqclrqg rpaagclpqq kpavlracnt nfcpvpvkrd dpscvdfftw
     1201 chlvpqhgvc nhkfygkqcc ksctkkn
//
LOCUS       XP_041324589            1227 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 18
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324589
VERSION     XP_041324589.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468655.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1227
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 18 isoform X2"
                     /calculated_mol_wt=136167
     Region          65..204
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          296..497
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(439..440,443,449)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          514..581
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          595..647
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          651..751
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          755..862
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          886..935
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          938..994
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          998..1054
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1062..1121
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1133..1179
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1194..1224
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1227
                     /gene="ADAMTS18"
                     /coded_by="XM_041468655.1:156..3839"
                     /db_xref="GeneID:121354219"
ORIGIN      
        1 mdclllavwt lpaailggss mqfqtlpwlg stvktlqlcc lccmshaatl tsdsiselth
       61 dyvfvtpvrv dasgsyishd vlhstrrkrs tqssksslhy kfsafgqelh lelkpstils
      121 nsfivqvlgk dgvsnsqdhe ieqcfyqgfi rndstssvai stcvglsgli rtrqmeflis
      181 plpqqlareh nytcpaghhp hvlykrtaeg kvhrspaqph pkscpsgrrr arashahpar
      241 asgyrhgrfq kqhfcgrrkk yapqppteet yirsdeygts arfkrssaki qkngslnvet
      301 lvvadkkmle khgkenvtty iltvmnmvss lfkdgtigsd iniivvslll leqepgglli
      361 nhhadqslns fcqwqsalvg kngkrhdhai lltgfdicsw knepcdtlgf apisgmcsky
      421 rsctinedtg lglaftiahe sghnfgmihd gegnacrkae gnimsptltg nngvfswsvc
      481 srqylnkfls taqaaclide pkqtgqykyp dklpgqiyda dtqckwqfgm kaklcnlsfv
      541 kdickslwch kvghrcetkf mpaaegtacg ismwcrrgqc vrygehgpkp vhgqwsawsq
      601 wsectrtcga gvtyqerhcn npkpqyggkf cqgssrvyql cnkqpcpags ldfralqcae
      661 ynskpfrgwf ykwkpytkve eqdrcklyct aedfdfffam sskvkdgtlc spnnydvcid
      721 giceqvgcdh glgskavlda cgvckgdnst ckffkgqylt qhkandyyav vtvpagarsi
      781 qlqelhisps ylavrslasr yyltgdwtid wpgkfpfagt vfdyqrsfnh peslyaagpt
      841 netlvfeill qgknpgiswe ytfakssien ktsvrkhsys wvtvqsecsa tcggghitak
      901 aicledhhar vntsfcgprt kplmetklcn tnpcpaywsa gewstcsksc gggqqsrlvq
      961 cvqkrafqre evvahslcpv stpaqvqvcs gqdcppewsp gpwsqcsktc grgikkrdvy
     1021 ckspgspkvk ilpesmcstd pkpesqqtcv lgrcpkndrl qwvisswsec sascgpglrq
     1081 relkcgeksi qgklvtfpqr rcrnikkpnt sleeacnkga cpsqtlynmv sgwysspwqq
     1141 ctvtcgggvq trsvqclrqg rpaagclpqq kpavlracnt nfcpvpvkrd dpscvdfftw
     1201 chlvpqhgvc nhkfygkqcc ksctkkn
//
LOCUS       XP_041324590            1184 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 18
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324590
VERSION     XP_041324590.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468656.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1184
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 18 isoform X3"
                     /calculated_mol_wt=131554
     Region          22..161
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          253..454
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(396..397,400,406)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          471..538
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          552..604
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          608..708
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          712..819
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          843..892
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          895..951
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          955..1011
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1019..1078
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1090..1136
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1151..1181
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1184
                     /gene="ADAMTS18"
                     /coded_by="XM_041468656.1:144..3698"
                     /db_xref="GeneID:121354219"
ORIGIN      
        1 mshaatltsd siselthdyv fvtpvrvdas gsyishdvlh strrkrstqs sksslhykfs
       61 afgqelhlel kpstilsnsf ivqvlgkdgv snsqdheieq cfyqgfirnd stssvaistc
      121 vglsglirtr qmeflisplp qqlarehnyt cpaghhphvl ykrtaegkvh rspaqphpks
      181 cpsgrrrara shahparasg yrhgrfqkqh fcgrrkkyap qppteetyir sdeygtsarf
      241 krssakiqkn gslnvetlvv adkkmlekhg kenvttyilt vmnmvsslfk dgtigsdini
      301 ivvslllleq epggllinhh adqslnsfcq wqsalvgkng krhdhaillt gfdicswkne
      361 pcdtlgfapi sgmcskyrsc tinedtglgl aftiahesgh nfgmihdgeg nacrkaegni
      421 msptltgnng vfswsvcsrq ylnkflstaq aaclidepkq tgqykypdkl pgqiydadtq
      481 ckwqfgmkak lcnlsfvkdi ckslwchkvg hrcetkfmpa aegtacgism wcrrgqcvry
      541 gehgpkpvhg qwsawsqwse ctrtcgagvt yqerhcnnpk pqyggkfcqg ssrvyqlcnk
      601 qpcpagsldf ralqcaeyns kpfrgwfykw kpytkveeqd rcklyctaed fdfffamssk
      661 vkdgtlcspn nydvcidgic eqvgcdhglg skavldacgv ckgdnstckf fkgqyltqhk
      721 andyyavvtv pagarsiqlq elhispsyla vrslasryyl tgdwtidwpg kfpfagtvfd
      781 yqrsfnhpes lyaagptnet lvfeillqgk npgisweytf akssienkts vrkhsyswvt
      841 vqsecsatcg gghitakaic ledhharvnt sfcgprtkpl metklcntnp cpaywsagew
      901 stcskscggg qqsrlvqcvq krafqreevv ahslcpvstp aqvqvcsgqd cppewspgpw
      961 sqcsktcgrg ikkrdvycks pgspkvkilp esmcstdpkp esqqtcvlgr cpkndrlqwv
     1021 isswsecsas cgpglrqrel kcgeksiqgk lvtfpqrrcr nikkpntsle eacnkgacps
     1081 qtlynmvsgw ysspwqqctv tcgggvqtrs vqclrqgrpa agclpqqkpa vlracntnfc
     1141 pvpvkrddps cvdfftwchl vpqhgvcnhk fygkqccksc tkkn
//
LOCUS       XP_041324591            1062 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 18
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324591
VERSION     XP_041324591.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468657.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1062
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 18 isoform X4"
                     /calculated_mol_wt=118148
     Region          <1..39
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          131..332
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(274..275,278,284)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          349..416
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          430..482
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          486..586
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          590..697
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          721..770
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          773..829
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          833..889
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          897..956
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          968..1014
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1029..1059
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1062
                     /gene="ADAMTS18"
                     /coded_by="XM_041468657.1:51..3239"
                     /db_xref="GeneID:121354219"
ORIGIN      
        1 msglirtrqm eflisplpqq larehnytcp aghhphvlyk rtaegkvhrs paqphpkscp
       61 sgrrrarash ahparasgyr hgrfqkqhfc grrkkyapqp pteetyirsd eygtsarfkr
      121 ssakiqkngs lnvetlvvad kkmlekhgke nvttyiltvm nmvsslfkdg tigsdiniiv
      181 vslllleqep ggllinhhad qslnsfcqwq salvgkngkr hdhailltgf dicswknepc
      241 dtlgfapisg mcskyrscti nedtglglaf tiahesghnf gmihdgegna crkaegnims
      301 ptltgnngvf swsvcsrqyl nkflstaqaa clidepkqtg qykypdklpg qiydadtqck
      361 wqfgmkaklc nlsfvkdick slwchkvghr cetkfmpaae gtacgismwc rrgqcvryge
      421 hgpkpvhgqw sawsqwsect rtcgagvtyq erhcnnpkpq yggkfcqgss rvyqlcnkqp
      481 cpagsldfra lqcaeynskp frgwfykwkp ytkveeqdrc klyctaedfd fffamsskvk
      541 dgtlcspnny dvcidgiceq vgcdhglgsk avldacgvck gdnstckffk gqyltqhkan
      601 dyyavvtvpa garsiqlqel hispsylavr slasryyltg dwtidwpgkf pfagtvfdyq
      661 rsfnhpesly aagptnetlv feillqgknp gisweytfak ssienktsvr khsyswvtvq
      721 secsatcggg hitakaicle dhharvntsf cgprtkplme tklcntnpcp aywsagewst
      781 cskscgggqq srlvqcvqkr afqreevvah slcpvstpaq vqvcsgqdcp pewspgpwsq
      841 csktcgrgik krdvyckspg spkvkilpes mcstdpkpes qqtcvlgrcp kndrlqwvis
      901 swsecsascg pglrqrelkc geksiqgklv tfpqrrcrni kkpntsleea cnkgacpsqt
      961 lynmvsgwys spwqqctvtc gggvqtrsvq clrqgrpaag clpqqkpavl racntnfcpv
     1021 pvkrddpscv dfftwchlvp qhgvcnhkfy gkqccksctk kn
//
LOCUS       XP_041324592             442 aa            linear   VRT 06-MAY-2021
DEFINITION  speckle targeted PIP5K1A-regulated poly(A) polymerase-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324592
VERSION     XP_041324592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521774.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>442
                     /product="speckle targeted PIP5K1A-regulated poly(A)
                     polymerase-like"
     Region          1..>22
                     /region_name="NT_Pol-beta-like"
                     /note="Nucleotidyltransferase (NT) domain of DNA
                     polymerase beta and similar proteins; cl11966"
                     /db_xref="CDD:472251"
     Region          28..>284
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <29..>112
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          <285..347
                     /region_name="NT_PAP_TUTase"
                     /note="Nucleotidyltransferase (NT) domain of poly(A)
                     polymerases and terminal uridylyl transferases; cd05402"
                     /db_xref="CDD:143392"
     Site            order(312,315,317,328,335..336)
                     /site_type="active"
                     /note="putative primer-binding pocket [active]"
                     /db_xref="CDD:143392"
     CDS             1..442
                     /gene="LOC121354220"
                     /coded_by="XM_041468658.1:<1..>1329"
                     /codon_start=3
                     /db_xref="GeneID:121354220"
ORIGIN      
        1 csvvpygssv ngfdvhgcdl dlhlelgdpq spetpngdpq iletpngdpq slrpsngdpq
       61 ipetpngdpq slrppngdpq tlrtpngdpq spetpngdpq tlrppngapq spgtllgdgd
      121 ppshgsllgd kdpplkgsfl gsdrshlgse gsllgsplgd rdpslegslm gsegslsgdk
      181 gslwgsegsl lgslsgdrdp slegsligse gsllgcggsl lgspssdrdp llpsepaspa
      241 gspcgseggs lsgaesseae gslsgsegsl lgcggsllgr gappeqvlal vgavlrrcvp
      301 gvrgvravpg arrpvvkfsh kqsglagdvc ldnrlalfnt rflrlcadad prvrplgyal
      361 rlwargqrla gnragggpll tnyaltlllv lflqsrsppv lpsvrrlrll agpqdraqvg
      421 gwdcsfprda aalepsgnsq sa
//
LOCUS       XP_041324593             219 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C12orf45 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324593
VERSION     XP_041324593.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468659.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="uncharacterized protein C12orf45 homolog"
                     /calculated_mol_wt=23742
     Region          106..>166
                     /region_name="NOPCHAP1"
                     /note="NOP protein chaperone 1; pfam15370"
                     /db_xref="CDD:405951"
     CDS             1..219
                     /gene="NOPCHAP1"
                     /coded_by="XM_041468659.1:1..660"
                     /db_xref="GeneID:121354222"
ORIGIN      
        1 msgqtvpvcg ylhrgsgrvt aisppravpa vahvrqrrys srpaggaqpp saraaplpcg
       61 rahgaarell dvrprpglgd illinskcss kkattlqtvk vprsnvldrv qsflpqmaqa
      121 ndelkrkmvt apahqfdieh ldsetekvie mnvavvelsd sdtdeellts eddsesdedd
      181 svtdevtvdn ikfpkqkgek gkieildska nekirarks
//
LOCUS       XP_041324594            1173 aa            linear   VRT 06-MAY-2021
DEFINITION  WASH complex subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324594
VERSION     XP_041324594.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468660.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1173
                     /product="WASH complex subunit 4"
                     /calculated_mol_wt=135980
     Region          32..600
                     /region_name="WASH-4_N"
                     /note="WASH complex subunit 4, N-terminal; pfam14745"
                     /db_xref="CDD:434178"
     Region          605..949
                     /region_name="WASH-7_mid"
                     /note="WASH complex subunit 7; pfam14744"
                     /db_xref="CDD:434177"
     Region          966..1135
                     /region_name="WASH-7_C"
                     /note="WASH complex subunit 7, C-terminal; pfam14746"
                     /db_xref="CDD:464293"
     CDS             1..1173
                     /gene="WASHC4"
                     /coded_by="XM_041468660.1:96..3617"
                     /db_xref="GeneID:121354224"
ORIGIN      
        1 maletlspdw efdrlddgsq kihaevqlkn ygkfleeyts qlkriedald dsvgdvwdfs
       61 ldpialkllp yeqsslleli ktenkvlnkv itvyaalcce ikklkyeaet kfyngllfyg
      121 egatdssmve gdcqiqmgrf vsflqelscf vtrcyevvvn vvhqlavlyt snksapkiie
      181 tsgvhfqamy ehlgelltil itldeiidnh atlkdhwtmy krllksvhhn pskfgiqedk
      241 lkpfeklllk lecqlldgmi fqacieqqfd slnggvsvsk nstfaeefah tlrtsfsnve
      301 aklgepseid qrdkyvgicg lfvlhfqifr svdkkfyksl ldvckkvpai tltaniiwfa
      361 dnfliqkipa aaklldkksi htvktqrenf lqqraqsltk dmqsyyvfvs swmtkmesil
      421 skeqrttkfs edlsnrcnvf iqgflyaysl stiikmtmnl ylsmqkpmtk tsvkalcrlv
      481 ellkaiehmf yrrsmvvads vthitqhlqy qalhsisvak krvisdkkys eqrldvlsal
      541 vlaentlngp stkqrrlivs lalsvgtqmk tfkdeelipl qlvlkkldli seltervraq
      601 cdccflywhr avfpiylddv yenavdsarl hymfsalrdc vppmmharhl esyevllecy
      661 dkeimevlne hlldklckei ekdlrlsvht hlklddrnpf rvgmkdlahf fflnpirffn
      721 rfidikayvt hyldktfynl ttvalhdwat ysemrnvatq ryglsmteah lpsqtleqgl
      781 dvleimrnih vfvsrylynl nnqifierts nnkhlntini rhiansirth gtgimnttvn
      841 ftyqflrkkf yifsqfmyde hiksrlikdi rffrevkdqn dhkypferad kfnrgirklg
      901 itpdgqsyld qfrqlisqig namgyvrmir sgglhccssa irfvpdledi vnfeelvkee
      961 glseetqkaa rqldsvlsdl trnfaegtey fkmlvdvfap efrstknmhl rnfyvivppl
     1021 tlnfvehsis ckeklnkknk sgaaftddgf amgvayilkl ldqyqefdsl hwfqsvreky
     1081 vkeiravakq qnvqstnqde kllqtmnltq krlevclqef ellyfslssa riffradkta
     1141 aeesqekkek eeesgkasng dlsnstpaeh vvk
//
LOCUS       XP_041324595            1173 aa            linear   VRT 06-MAY-2021
DEFINITION  WASH complex subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324595
VERSION     XP_041324595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1173
                     /product="WASH complex subunit 4"
                     /calculated_mol_wt=135980
     Region          32..600
                     /region_name="WASH-4_N"
                     /note="WASH complex subunit 4, N-terminal; pfam14745"
                     /db_xref="CDD:434178"
     Region          605..949
                     /region_name="WASH-7_mid"
                     /note="WASH complex subunit 7; pfam14744"
                     /db_xref="CDD:434177"
     Region          966..1135
                     /region_name="WASH-7_C"
                     /note="WASH complex subunit 7, C-terminal; pfam14746"
                     /db_xref="CDD:464293"
     CDS             1..1173
                     /gene="WASHC4"
                     /coded_by="XM_041468661.1:96..3617"
                     /db_xref="GeneID:121354224"
ORIGIN      
        1 maletlspdw efdrlddgsq kihaevqlkn ygkfleeyts qlkriedald dsvgdvwdfs
       61 ldpialkllp yeqsslleli ktenkvlnkv itvyaalcce ikklkyeaet kfyngllfyg
      121 egatdssmve gdcqiqmgrf vsflqelscf vtrcyevvvn vvhqlavlyt snksapkiie
      181 tsgvhfqamy ehlgelltil itldeiidnh atlkdhwtmy krllksvhhn pskfgiqedk
      241 lkpfeklllk lecqlldgmi fqacieqqfd slnggvsvsk nstfaeefah tlrtsfsnve
      301 aklgepseid qrdkyvgicg lfvlhfqifr svdkkfyksl ldvckkvpai tltaniiwfa
      361 dnfliqkipa aaklldkksi htvktqrenf lqqraqsltk dmqsyyvfvs swmtkmesil
      421 skeqrttkfs edlsnrcnvf iqgflyaysl stiikmtmnl ylsmqkpmtk tsvkalcrlv
      481 ellkaiehmf yrrsmvvads vthitqhlqy qalhsisvak krvisdkkys eqrldvlsal
      541 vlaentlngp stkqrrlivs lalsvgtqmk tfkdeelipl qlvlkkldli seltervraq
      601 cdccflywhr avfpiylddv yenavdsarl hymfsalrdc vppmmharhl esyevllecy
      661 dkeimevlne hlldklckei ekdlrlsvht hlklddrnpf rvgmkdlahf fflnpirffn
      721 rfidikayvt hyldktfynl ttvalhdwat ysemrnvatq ryglsmteah lpsqtleqgl
      781 dvleimrnih vfvsrylynl nnqifierts nnkhlntini rhiansirth gtgimnttvn
      841 ftyqflrkkf yifsqfmyde hiksrlikdi rffrevkdqn dhkypferad kfnrgirklg
      901 itpdgqsyld qfrqlisqig namgyvrmir sgglhccssa irfvpdledi vnfeelvkee
      961 glseetqkaa rqldsvlsdl trnfaegtey fkmlvdvfap efrstknmhl rnfyvivppl
     1021 tlnfvehsis ckeklnkknk sgaaftddgf amgvayilkl ldqyqefdsl hwfqsvreky
     1081 vkeiravakq qnvqstnqde kllqtmnltq krlevclqef ellyfslssa riffradkta
     1141 aeesqekkek eeesgkasng dlsnstpaeh vvk
//
LOCUS       XP_041324596            1173 aa            linear   VRT 06-MAY-2021
DEFINITION  WASH complex subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324596
VERSION     XP_041324596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1173
                     /product="WASH complex subunit 4"
                     /calculated_mol_wt=135980
     Region          32..600
                     /region_name="WASH-4_N"
                     /note="WASH complex subunit 4, N-terminal; pfam14745"
                     /db_xref="CDD:434178"
     Region          605..949
                     /region_name="WASH-7_mid"
                     /note="WASH complex subunit 7; pfam14744"
                     /db_xref="CDD:434177"
     Region          966..1135
                     /region_name="WASH-7_C"
                     /note="WASH complex subunit 7, C-terminal; pfam14746"
                     /db_xref="CDD:464293"
     CDS             1..1173
                     /gene="WASHC4"
                     /coded_by="XM_041468662.1:96..3617"
                     /db_xref="GeneID:121354224"
ORIGIN      
        1 maletlspdw efdrlddgsq kihaevqlkn ygkfleeyts qlkriedald dsvgdvwdfs
       61 ldpialkllp yeqsslleli ktenkvlnkv itvyaalcce ikklkyeaet kfyngllfyg
      121 egatdssmve gdcqiqmgrf vsflqelscf vtrcyevvvn vvhqlavlyt snksapkiie
      181 tsgvhfqamy ehlgelltil itldeiidnh atlkdhwtmy krllksvhhn pskfgiqedk
      241 lkpfeklllk lecqlldgmi fqacieqqfd slnggvsvsk nstfaeefah tlrtsfsnve
      301 aklgepseid qrdkyvgicg lfvlhfqifr svdkkfyksl ldvckkvpai tltaniiwfa
      361 dnfliqkipa aaklldkksi htvktqrenf lqqraqsltk dmqsyyvfvs swmtkmesil
      421 skeqrttkfs edlsnrcnvf iqgflyaysl stiikmtmnl ylsmqkpmtk tsvkalcrlv
      481 ellkaiehmf yrrsmvvads vthitqhlqy qalhsisvak krvisdkkys eqrldvlsal
      541 vlaentlngp stkqrrlivs lalsvgtqmk tfkdeelipl qlvlkkldli seltervraq
      601 cdccflywhr avfpiylddv yenavdsarl hymfsalrdc vppmmharhl esyevllecy
      661 dkeimevlne hlldklckei ekdlrlsvht hlklddrnpf rvgmkdlahf fflnpirffn
      721 rfidikayvt hyldktfynl ttvalhdwat ysemrnvatq ryglsmteah lpsqtleqgl
      781 dvleimrnih vfvsrylynl nnqifierts nnkhlntini rhiansirth gtgimnttvn
      841 ftyqflrkkf yifsqfmyde hiksrlikdi rffrevkdqn dhkypferad kfnrgirklg
      901 itpdgqsyld qfrqlisqig namgyvrmir sgglhccssa irfvpdledi vnfeelvkee
      961 glseetqkaa rqldsvlsdl trnfaegtey fkmlvdvfap efrstknmhl rnfyvivppl
     1021 tlnfvehsis ckeklnkknk sgaaftddgf amgvayilkl ldqyqefdsl hwfqsvreky
     1081 vkeiravakq qnvqstnqde kllqtmnltq krlevclqef ellyfslssa riffradkta
     1141 aeesqekkek eeesgkasng dlsnstpaeh vvk
//
LOCUS       XP_041324597            1173 aa            linear   VRT 06-MAY-2021
DEFINITION  WASH complex subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324597
VERSION     XP_041324597.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468663.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1173
                     /product="WASH complex subunit 4"
                     /calculated_mol_wt=135980
     Region          32..600
                     /region_name="WASH-4_N"
                     /note="WASH complex subunit 4, N-terminal; pfam14745"
                     /db_xref="CDD:434178"
     Region          605..949
                     /region_name="WASH-7_mid"
                     /note="WASH complex subunit 7; pfam14744"
                     /db_xref="CDD:434177"
     Region          966..1135
                     /region_name="WASH-7_C"
                     /note="WASH complex subunit 7, C-terminal; pfam14746"
                     /db_xref="CDD:464293"
     CDS             1..1173
                     /gene="WASHC4"
                     /coded_by="XM_041468663.1:96..3617"
                     /db_xref="GeneID:121354224"
ORIGIN      
        1 maletlspdw efdrlddgsq kihaevqlkn ygkfleeyts qlkriedald dsvgdvwdfs
       61 ldpialkllp yeqsslleli ktenkvlnkv itvyaalcce ikklkyeaet kfyngllfyg
      121 egatdssmve gdcqiqmgrf vsflqelscf vtrcyevvvn vvhqlavlyt snksapkiie
      181 tsgvhfqamy ehlgelltil itldeiidnh atlkdhwtmy krllksvhhn pskfgiqedk
      241 lkpfeklllk lecqlldgmi fqacieqqfd slnggvsvsk nstfaeefah tlrtsfsnve
      301 aklgepseid qrdkyvgicg lfvlhfqifr svdkkfyksl ldvckkvpai tltaniiwfa
      361 dnfliqkipa aaklldkksi htvktqrenf lqqraqsltk dmqsyyvfvs swmtkmesil
      421 skeqrttkfs edlsnrcnvf iqgflyaysl stiikmtmnl ylsmqkpmtk tsvkalcrlv
      481 ellkaiehmf yrrsmvvads vthitqhlqy qalhsisvak krvisdkkys eqrldvlsal
      541 vlaentlngp stkqrrlivs lalsvgtqmk tfkdeelipl qlvlkkldli seltervraq
      601 cdccflywhr avfpiylddv yenavdsarl hymfsalrdc vppmmharhl esyevllecy
      661 dkeimevlne hlldklckei ekdlrlsvht hlklddrnpf rvgmkdlahf fflnpirffn
      721 rfidikayvt hyldktfynl ttvalhdwat ysemrnvatq ryglsmteah lpsqtleqgl
      781 dvleimrnih vfvsrylynl nnqifierts nnkhlntini rhiansirth gtgimnttvn
      841 ftyqflrkkf yifsqfmyde hiksrlikdi rffrevkdqn dhkypferad kfnrgirklg
      901 itpdgqsyld qfrqlisqig namgyvrmir sgglhccssa irfvpdledi vnfeelvkee
      961 glseetqkaa rqldsvlsdl trnfaegtey fkmlvdvfap efrstknmhl rnfyvivppl
     1021 tlnfvehsis ckeklnkknk sgaaftddgf amgvayilkl ldqyqefdsl hwfqsvreky
     1081 vkeiravakq qnvqstnqde kllqtmnltq krlevclqef ellyfslssa riffradkta
     1141 aeesqekkek eeesgkasng dlsnstpaeh vvk
//
LOCUS       XP_041324599             658 aa            linear   VRT 06-MAY-2021
DEFINITION  DCC-interacting protein 13-beta [Pyrgilauda ruficollis].
ACCESSION   XP_041324599
VERSION     XP_041324599.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468665.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..658
                     /product="DCC-interacting protein 13-beta"
                     /calculated_mol_wt=73752
     Region          20..234
                     /region_name="BAR_APPL2"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Adaptor
                     protein, Phosphotyrosine interaction, PH domain and
                     Leucine zipper containing 2; cd07632"
                     /db_xref="CDD:153316"
     Site            order(20,46,119,121,130,146,149,152,154,158,173)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153316"
     Site            order(29,32..33,37,40,43..44,47,57..58,60..61,64..65,
                     67..68,71,89,186,189..190,192,197..198,200..201,204..205,
                     207..208,211..212,214..215,219,222)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153316"
     Region          252..376
                     /region_name="BAR-PH_APPL"
                     /note="Adaptor protein containing PH domain, PTB domain,
                     and Leucine zipper motif Bin1/amphiphysin/Rvs167
                     (BAR)-Pleckstrin homology (PH) domain; cd13247"
                     /db_xref="CDD:270067"
     Region          478..611
                     /region_name="PTB_APPL"
                     /note="Adaptor protein containing PH domain, PTB domain,
                     and Leucine zipper motif (APPL; also called
                     DCC-interacting protein (DIP)-13alpha)
                     Phosphotyrosine-binding (PTB) domain; cd13158"
                     /db_xref="CDD:269980"
     Site            order(493,570,593)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269980"
     Site            order(559..564,577,602,606)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269980"
     CDS             1..658
                     /gene="APPL2"
                     /coded_by="XM_041468665.1:172..2148"
                     /db_xref="GeneID:121354225"
ORIGIN      
        1 mpavdkllle ealqdspqtr sllsvfeeda gtlteytnql lqamqrvyga qnemclatqq
       61 lskqllayek qhfalgkgde evistlhyfs kvvdelnilh selakqladt milpiiqfre
      121 kdltevstlk dlfglasneh dvsmakysrl pkrkeneklk aevakevana rrkqhlsslq
      181 yycalnalqy rkrvammepm lgytrgqinf fkkgaemfsk rmdsflssvs dmvqsiqgel
      241 daeaekmris qqdliavnes vytpdsdvts painrnliqk agylnlrnkt glvtttwerl
      301 yfftqggnlm cqprgavagg liqdldncsv mavdcedrry cfqittptgk agitlqaesk
      361 keyeewicai nnisrqiylt dnpeaaaikl nqtalqavtp itslgkkhev qhssqtvknm
      421 endkiipsgs agiqdttqli apgtpiqfdi vlpamefldq nrggrranpf gesedsnkde
      481 eedsllqqmf vvrflgsmav qsdetceviy eamrqvlaar aihnifrmte shlmvtsknl
      541 rlidpqtqvt ranfelttvt qfaahqenrr ligfvihlse tlgeesmsay vfesntegek
      601 icyaislgke iieaqkdpea laqlmksvpl tndgkfmlln dlseedgtmh eggeesev
//
LOCUS       XP_041324600             957 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial 10-formyltetrahydrofolate dehydrogenase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324600
VERSION     XP_041324600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..957
                     /product="mitochondrial 10-formyltetrahydrofolate
                     dehydrogenase"
                     /calculated_mol_wt=105401
     Region          58..260
                     /region_name="FMT_core_FDH_N"
                     /note="10-formyltetrahydrofolate dehydrogenase (FDH),
                     N-terminal hydrolase domain; cd08647"
                     /db_xref="CDD:187716"
     Site            order(64,67..69,140..144,146..147,152,161..164,172,192,
                     194..195,198..199)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:187716"
     Site            order(71..72,141..142,162,164,229)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187716"
     Site            order(143..147,149,152,161,192,195,197,199)
                     /site_type="other"
                     /note="cosubstrate binding site"
                     /db_xref="CDD:187716"
     Site            order(161,163,199)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:187716"
     Region          263..362
                     /region_name="FDH_Hydrolase_C"
                     /note="The C-terminal subdomain of the hydrolase domain on
                     the bi-functional protein 10-formyltetrahydrofolate
                     dehydrogenase; cd08703"
                     /db_xref="CDD:187731"
     Region          473..957
                     /region_name="ALDH_F1L_FTFDH"
                     /note="10-formyltetrahydrofolate dehydrogenase, ALDH
                     family 1L; cd07140"
                     /db_xref="CDD:143458"
     Site            order(537,539,543,546,584,587..588,592,594..604,610,615,
                     700,712,719,722,745,886,896,898..899,905,907..915,920,
                     922..924,926,930,932,935,937,949..957)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143458"
     Site            order(626..627,629..630,653,656,685..686,690..691,
                     704..707,710,713..714,728..730,762,859,861,889,927)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:143458"
     Site            order(630,728,759,762)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143458"
     CDS             1..957
                     /gene="ALDH1L2"
                     /coded_by="XM_041468666.1:1..2874"
                     /db_xref="GeneID:121354226"
ORIGIN      
        1 mqalarrqrh rrglhqtrrs ataaeparsw pggrkmlrta prllrtictt aaayqhklkl
       61 aligqsifgq evynklrkeg hkvvgvftvp dkngqadpla laaekdgtpv fkfpkwrakg
      121 kpiqevvaay ksvgaelnvl pfctqfipmd vidcpkhgsi iyhpsilprh rgasainwtl
      181 iqgdkkagft ifwaddgldt gpillqrecd vgqndtvddl ynrflfpegi kamveavhli
      241 adgkapripq pkegatyegi qkkenaeisw dqpaaalhnw irghdkvpga wttingqvvt
      301 fygsslldas vpagqeltik gasrpglvtk nglvvfgndg kmvlvrnlqf edgkmipask
      361 yfsadetial elreeekkfa ediraiwkgi lsnvavieds tdffksgass mhvvrmleei
      421 kqkhrglqlq nedvymatkf adfiqmavrk lrgedkeeel vidyvsknmn nmtvnmpyqc
      481 fingkfvdad dgktydtinp adgsviasvs sasladvdka vaaakeafen gewgrmnare
      541 rgrlmyrlad lmeehqeela tiesidsgav ytlalkthig msvqtfryfa gwcdkiqgat
      601 ipinqarpnh nltftkkepi gvcaiiipwn yplmmlawks aaclaagntl vlkpaqvtpl
      661 tslkfaelsa kagfpkgvin ilpgsgglvg qhlsehpdvr kvgftgstpt gkqimksaaa
      721 nlkkvslelg gkspliifsd celdravkmg mgavyfnkge nciaagrlfv eesihdefvr
      781 kvveeikkmk igdpldratd hgpqnhkahl ekllqycetg vkegatlvyg grqvhrpgff
      841 meptvftdve dhmyiaqees fgpvmviskf kngdvdgvlq ranateygla sgvftkdink
      901 alyiseklea gtvfintynk tdvaapfggf klsgfgkdlg eealheylrt kaitvey
//
LOCUS       XP_041324601             310 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 11 [Pyrgilauda ruficollis].
ACCESSION   XP_041324601
VERSION     XP_041324601.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468667.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="carbohydrate sulfotransferase 11"
                     /calculated_mol_wt=36616
     Region          71..302
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..310
                     /gene="CHST11"
                     /coded_by="XM_041468667.1:1..933"
                     /db_xref="GeneID:121354227"
ORIGIN      
        1 mrrnpfgmdi ccrkgsrspl qelynptqls ntailhqirr dqvtdtcran svssrkrrvl
       61 tpndlkhlvv dedhemiycy vpkvactnwk rvmmvltgrg kysdpmeipa neahvssnlk
      121 tlnqysipei nhrlknymkf lfvrepferl vsayrnkftq kyntsfhkry gtkivrrqrk
      181 natqealrkg ddvkfeefva ylidphtqre epfnehwqtv yslchpchih ydligkyetl
      241 eddsnyvlql agvgnylkfp tyakstrttd emtteffqni sslhqtqlye vykldflmfn
      301 ysvpsylkle
//
LOCUS       XP_041324602             573 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 41 member 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324602
VERSION     XP_041324602.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468668.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..573
                     /product="solute carrier family 41 member 2"
                     /calculated_mol_wt=62351
     Region          200..334
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     Region          414..555
                     /region_name="MgtE"
                     /note="Divalent cation transporter; pfam01769"
                     /db_xref="CDD:460317"
     CDS             1..573
                     /gene="SLC41A2"
                     /coded_by="XM_041468668.1:277..1998"
                     /db_xref="GeneID:121354228"
ORIGIN      
        1 mtnckgrsti sktnskvhdr egfvnwtinl ntiqsdkflr lllsmvpvvy qinqeerhkk
       61 vngvwqeglq paghnfnvrs eqhteyhhfs easfhgsngh sssscspkyd dftsynycdg
      121 mdtsetdaml qddnfssdsn ediivegsrk qpkesssima lqilvpflla gfgtvsagmv
      181 ldivqhwdvf knvtevfilv pallglkgnl emtlasrlst avnigkmdsp iekwnliign
      241 lalkqvqatv vgflaavaav vlgwipegky rfdhsvllcs ssvatafias llqgvimvgv
      301 ivgskktgin pdnvatpiaa sfgdlitlai lawisqglyt cletyyyvsp lvgafflalt
      361 pmgiviaakh patrtvlhsg wepvitamvi ssigglildt tvsdpnlvgi vvytpvingi
      421 ggnlvaiqas ristylhlhs ipgelpeeak gcyypcrtyc gtgvnnksaq vllllvipgh
      481 liflytihlm ksghtsltpi fvavylfaal lqvftllwia dwmvhhfwkk gkdpdsfsip
      541 yltalgdllg tallaigfhf lwligdrdgd vgd
//
LOCUS       XP_041324603             110 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like ECH-associated protein 1B [Pyrgilauda ruficollis].
ACCESSION   XP_041324603
VERSION     XP_041324603.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468669.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521962.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..110
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..110
                     /product="kelch-like ECH-associated protein 1B"
                     /calculated_mol_wt=11697
     Region          2..>87
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          33..77
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..110
                     /gene="LOC121354230"
                     /coded_by="XM_041468669.1:61..393"
                     /db_xref="GeneID:121354230"
ORIGIN      
        1 mggydgtqql ssaerfqpdt dtwsfvapmg hrrsalgata frgriyvlgg ydghsflesv
       61 ecydpeadaw tevtpmpsgr sglgvavtme pchpeetppe deetppggsc
//
LOCUS       XP_041324604             352 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Wnt-3a [Pyrgilauda ruficollis].
ACCESSION   XP_041324604
VERSION     XP_041324604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="protein Wnt-3a"
                     /calculated_mol_wt=39498
     Region          39..352
                     /region_name="Wnt_Wnt3_Wnt3a"
                     /note="Wnt domain found in proto-oncogene Wnt-3 and
                     similar proteins; cd19335"
                     /db_xref="CDD:381709"
     Site            order(204..205,208..210,218,331,333,335,337)
                     /site_type="other"
                     /note="Frizzled receptor binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381709"
     CDS             1..352
                     /gene="LOC121354231"
                     /coded_by="XM_041468670.1:118..1176"
                     /db_xref="GeneID:121354231"
ORIGIN      
        1 masfgyflfl cglsqalssy piwwslaigh qysslgtqpi lcgsipglvp kqlrfcrnyv
       61 eimpsvaegv kigiqecqhq frgrrwnctt vndslaifgp vldkatresa fvhaiasagv
      121 afavtrscae gsaticgcdt rhkgspgegw kwggcsedve fgsmvsrefa darenrpdar
      181 samnrhnnea grtsiielmh lkckchglsg scevktcwws qpdfrvigdy lkdkydsase
      241 mvvekhresr gwvetlrpky nffkaptekd lvyyenspnf cepnpetgsf gtrdricnvt
      301 shgidgcdll ccgrghntrt ekrkekchci fhwccyvrcq ecirvydvht ck
//
LOCUS       XP_041324606             363 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Wnt-9a [Pyrgilauda ruficollis].
ACCESSION   XP_041324606
VERSION     XP_041324606.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468672.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="protein Wnt-9a"
                     /calculated_mol_wt=40637
     Region          65..362
                     /region_name="Wnt_Wnt9a"
                     /note="Wnt domain found in protein Wnt-9a and similar
                     proteins; cd19353"
                     /db_xref="CDD:381727"
     Site            order(217..218,221..223,231,341,343,345,347)
                     /site_type="other"
                     /note="Frizzled receptor binding site [polypeptide
                     binding]"
                     /db_xref="CDD:381727"
     CDS             1..363
                     /gene="WNT9A"
                     /coded_by="XM_041468672.1:56..1147"
                     /db_xref="GeneID:121354232"
ORIGIN      
        1 mldghvllgw lsscallgll acaprpsaay fgltgneplt ilpltsemee aavkahykvc
       61 drlklekkqr rmcrrdpgva etlmeaisms alecqyqfrf erwnctlegr yrasllkrgf
      121 ketaflyais saglthamak acsagrmerc tcdeapdlen reawqwggcg dnlkysnkfv
      181 keflgrkpnk dlrarvdfhn nlvgmkvika gvettckchg vsgsctvrtc wrqlspfhei
      241 gkqlkqkyet slkvgsttne atgegdispp kkstpghsdq iprttdlvyi ddspsfclms
      301 ryspgtsgrk cykdkncdsi ccgrghntqs rvvtrpcqcq vrwccyveck qctqreevyt
      361 ckd
//
LOCUS       XP_041324607             171 aa            linear   VRT 06-MAY-2021
DEFINITION  lutropin subunit beta-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324607
VERSION     XP_041324607.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468673.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024521996.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..171
                     /product="lutropin subunit beta-like"
     Region          58..163
                     /region_name="GHB"
                     /note="Glycoprotein hormone beta chain homologues;
                     smart00068"
                     /db_xref="CDD:214502"
     Site            order(61,86,90,109,140,142)
                     /site_type="other"
                     /note="cysteine knot motif"
                     /db_xref="CDD:200450"
     Site            order(68,71,85..98,108..109,145,147,150..155)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:200450"
     Site            order(98,147..148,151,153..155)
                     /site_type="other"
                     /note="receptor binding site [polypeptide binding]"
                     /db_xref="CDD:200450"
     CDS             1..171
                     /gene="LOC121354234"
                     /coded_by="XM_041468673.1:<1..516"
                     /db_xref="GeneID:121354234"
ORIGIN      
        1 lppqllllva lvatpvalgt rgdpaaalsp lpggvslpgg gvsllggvpl vlgggpgrpp
       61 crpvnvtval ekdecpqcra vtatacggfc rtrepvyrsp lgpprqaact ysgvryerwi
      121 lggcppgtdp avtvpvalgc rcgrcpmasa dcavmglgps fcgapggfgg s
//
LOCUS       XP_041324608              89 aa            linear   VRT 06-MAY-2021
DEFINITION  deoxyguanosine kinase, mitochondrial-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324608
VERSION     XP_041324608.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468674.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522040.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..89
                     /product="deoxyguanosine kinase, mitochondrial-like"
                     /calculated_mol_wt=9119
     Region          <1..>53
                     /region_name="NK"
                     /note="Nucleoside/nucleotide kinase (NK) is a protein
                     superfamily consisting of multiple families of enzymes
                     that share structural similarity and are functionally
                     related to the catalysis of the reversible phosphate group
                     transfer from nucleoside triphosphates...; cl17190"
                     /db_xref="CDD:450170"
     CDS             1..89
                     /gene="LOC121354235"
                     /coded_by="XM_041468674.1:98..367"
                     /db_xref="GeneID:121354235"
ORIGIN      
        1 myqeparwsy tfqtlsclsr lkaaleppee gggtpgtppa vrvfersvfs drypkkghgl
       61 gvgaqggqsv ptgvlsgsng iwgclgggp
//
LOCUS       XP_041324609             111 aa            linear   VRT 06-MAY-2021
DEFINITION  CAP-Gly domain-containing linker protein 3-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324609
VERSION     XP_041324609.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468675.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522084.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>111
                     /product="CAP-Gly domain-containing linker protein 3-like"
     Region          20..>106
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     CDS             1..111
                     /gene="LOC121354236"
                     /coded_by="XM_041468675.1:<1..>333"
                     /db_xref="GeneID:121354236"
ORIGIN      
        1 ilrrgchvdd rdgltdmtll hyackagahg vgapaaavrl sqrllalggd aglrsrwthm
       61 nalhyaayfd vpelirtllr aaaprvlhst csdfshgtal hiaasnlclg a
//
LOCUS       XP_041324611             149 aa            linear   VRT 06-MAY-2021
DEFINITION  seipin, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324611
VERSION     XP_041324611.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468677.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522173.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..149
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>149
                     /product="seipin"
     Region          <1..>43
                     /region_name="Seipin_BSCL2_like"
                     /note="Homo sapiens Seipin and similar proteins; cd23995"
                     /db_xref="CDD:467829"
     Region          <82..>145
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..149
                     /gene="BSCL2"
                     /coded_by="XM_041468677.1:33..>478"
                     /db_xref="GeneID:121354238"
ORIGIN      
        1 mlhyrsrllr alhtaafagl flsgfaeqsq tlelelmary redpvglggp ggvpggswgg
       61 sqplpaprfr rlchyivnlr yfemcilmvi amssialaae dpvqpnaprn nvrplpklgq
      121 tppqilpetp pqicerplpk scptppatt
//
LOCUS       XP_041324612             732 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: cactin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324612
VERSION     XP_041324612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468678.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            frameshifts          :: corrected 2 indels
            internal stop codons :: corrected 1 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="LOW QUALITY PROTEIN: cactin-like"
                     /calculated_mol_wt=85666
     Region          263..451
                     /region_name="Cactin_mid"
                     /note="Conserved mid region of cactin; pfam10312"
                     /db_xref="CDD:463049"
     Region          608..730
                     /region_name="CactinC_cactus"
                     /note="Cactus-binding C-terminus of cactin protein;
                     pfam09732"
                     /db_xref="CDD:401611"
     CDS             1..732
                     /gene="LOC121354239"
                     /coded_by="XM_041468678.1:1..2199"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     deleted 1 base in 1 codon; substituted 1 base at 1 genomic
                     stop codon"
                     /db_xref="GeneID:121354239"
ORIGIN      
        1 mgsrlcspar gnhseqerdl dkeweqerdq grlrsgshrq qhhsksksws qhqeprsgsd
       61 sgndrqkwkk kkrhhsqdqy qdqrkqcsws wgcssgssle rgweraargq ewhhrrdgsk
      121 ssvssitspa ppcpreelgq qlslreeekk qaallkxpke kxaqrlakke akeikkrekm
      181 grgeeytgyt ntdkpfgnkn llgtfiwska lekkvishld ekdlkerikq iqednrlelq
      241 kvkkmrlere qekamqelem qqrekeaehf ktweeqednf hlqhaklrse iqiwdgrvkp
      301 tdllakyist edndlavkmh epynflndlt vsdmedlved iqvyteleqg kntdfwrdmt
      361 iitedeiakl ckpeasrkgr peerrdgvna lvssdvqsmf kgktynqlqa lyhsieskiq
      421 argpnldigy qesllqqlka ymaqarlqeq hqdmlrqkly kqkqeqrvec eplfpiikqe
      481 paspsnrldp kesleaqpsp ssepeqdtea egeavlmeed liqqslddyd agkysprllg
      541 pnelpfnahv leaeedthql lllrqqlqvt gdasestnif fdkakegmda deaqfsveml
      601 ltgkaclwad kyrprkprff nrvhtgfqwn kvllthydvd nsppktmqgy kfnifypnli
      661 dkysmpkyfl eacqdnkdfa ilhfhagppy ediafkivnr eweyshhhgf rcqfangifq
      721 lwfhfkcyry hw
//
LOCUS       XP_041324613            1022 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol 1,4,5-trisphosphate receptor type 2-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324613
VERSION     XP_041324613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468679.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..1022
                     /product="inositol 1,4,5-trisphosphate receptor type
                     2-like"
     Region          238..345
                     /region_name="RIH_assoc"
                     /note="RyR and IP3R Homology associated; pfam08454"
                     /db_xref="CDD:462482"
     Region          628..873
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          <952..1001
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     CDS             1..1022
                     /gene="LOC121354240"
                     /coded_by="XM_041468679.1:<1..3071"
                     /codon_start=3
                     /db_xref="GeneID:121354240"
ORIGIN      
        1 nwpqlsfifi fllkgntlrk illyryfkge ygsgvngpls asynktaqvg ggfsgqdadk
       61 sgvtvfdiqc lldkegasel vidvivntrn drifsegill gialleggnt qtqystyqql
      121 keqkkserff kvlydrmkaa qqeirstvtv ntidlgskkk eddsdltisv pkkrvkdstl
      181 hlkegmkgql teassatska ysvyrremdp eidlmgsgad aanaeeksae eaimspaiai
      241 mqpilrflql lcenhnrelq nflrhqnnkt nynlvcetlq fldcicgstt gglgllglyi
      301 nernvalvnq tleslteycq gpchenqtci athesngidi iialilndin plgkycmdlv
      361 lqlknnaskl llaimesrqd senaerilfn mrprelvdvm knaynqgldc dheeengdns
      421 ispkdvghni yilahqlach nktlqqmlkp gsdpdegdea lrfyakhtaq ieivrhdrtm
      481 ekivfpvpni cefltresks rvfntterde qgskvidffq qaedlynemk wqkkirnnpa
      541 lfwfsrhisl wgsisfnlav linlavalfy pfgddgdegt lsplfsvllw iavafctaml
      601 ffiskpvgir pflvsvilrs iytiglgptl illgaanlcn kivflvsfvg nrgtftrgyr
      661 avimdmafly hvayvlvcml glcvheffys fllfdlvyre etllnviksv trngrsiilt
      721 avlalilvyl fsiigflflk ddfimevdrl kirtsaagig evptttltsm mgacakencs
      781 tsipalnpge ekedgiertc dtllmcivtv lnqglrnggg vgdvlrkpsk deplfgarvv
      841 ydllfyfivi iivlnlifgv iidtfadlrs ekqkkeeilk ttcficgler dkfdnktvsf
      901 eehikaehnm whylyfivlv kvkdpteytg pesyvaqmiv eknldwfprm ramslvsneg
      961 dseqneirnl qerlestmsl vkqlssqlae lkeqmteqrk nkqrlgflgs ntphvnhhmp
     1021 pp
//
LOCUS       XP_041324614             450 aa            linear   VRT 06-MAY-2021
DEFINITION  class E basic helix-loop-helix protein 41 [Pyrgilauda ruficollis].
ACCESSION   XP_041324614
VERSION     XP_041324614.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468680.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="class E basic helix-loop-helix protein 41"
                     /calculated_mol_wt=47073
     Region          31..122
                     /region_name="bHLH-O_DEC2"
                     /note="basic helix-loop-helix-orange (bHLH-O) domain found
                     in differentially expressed in chondrocytes protein 2
                     (DEC2) and similar proteins; cd19750"
                     /db_xref="CDD:381593"
     Site            order(49..51,54,56..57,61,84..85)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381593"
     Site            order(56..57,59..61,63..64,66..67,70..71,74,82,84..86,
                     89..90,92..93,95..97,99..100,103)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381593"
     Region          129..168
                     /region_name="ORANGE"
                     /note="Orange domain; smart00511"
                     /db_xref="CDD:128787"
     CDS             1..450
                     /gene="BHLHE41"
                     /coded_by="XM_041468680.1:142..1494"
                     /db_xref="GeneID:121354241"
ORIGIN      
        1 mdegisrlpe rqllehrdfi gldypalymc kpkrgvkrdd sketyklphr liekkrrdri
       61 neciaqlkdl lpehlklttl ghlekavvle ltlkhlkalt alteqqhqki ialqngersm
      121 kspvqadlda fhsgfqtcak evlqylsrfe swtpreqrca qllghlhsis sqflsgpqlf
      181 spppgplskg ssssssppap hcapghkpeg qancvpviqr thaaelsaet dtdtdsgygg
      241 egearpergp aaaaggalpa laikqepsgd elppapkrlk ldrggspmps ppglatwgae
      301 aaaaaaaaal vrpdaallgs lmalgagggg gpfgqpaaap fclpfyfisp saaaaymqpf
      361 ldksslekyl ypaapiplly pgipaqaaaa aaaaaasfpc lssvlgpeka aaaatglppt
      421 phlphpfaas aepgeepepa aaeepgaegp
//
LOCUS       XP_041324615             256 aa            linear   VRT 06-MAY-2021
DEFINITION  sarcospan [Pyrgilauda ruficollis].
ACCESSION   XP_041324615
VERSION     XP_041324615.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468681.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="sarcospan"
                     /calculated_mol_wt=27918
     Region          80..223
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     CDS             1..256
                     /gene="SSPN"
                     /coded_by="XM_041468681.1:149..919"
                     /db_xref="GeneID:121354242"
ORIGIN      
        1 mgkeekkarh gtspntqnqt gkapggekst gstqesemkk kqkkskgdpk tgqeeeshtc
       61 cgcrfpllfa llqlalgasv tvlgflmagi ssslpvrdtp ywagiiicvv alvgfvmlci
      121 syqpdektca qftvkllyfl lsalalvacv lavafaahhy lqltkftcdn iqdscqckld
      181 tadplgrtfv yqdvancgsl trmlslylll qmalnlvaal vcllmcfmvw khryqvfyvg
      241 vrfqpltaae ghaqqv
//
LOCUS       XP_041324616             419 aa            linear   VRT 06-MAY-2021
DEFINITION  ras association domain-containing protein 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324616
VERSION     XP_041324616.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468682.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="ras association domain-containing protein 8"
                     /calculated_mol_wt=48339
     Region          2..83
                     /region_name="RA_RASSF8"
                     /note="Ras-associating (RA) domain found in N-terminal
                     Ras-association domain family 8 (RASSF8); cd16134"
                     /db_xref="CDD:340551"
     Region          <145..>351
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..419
                     /gene="RASSF8"
                     /coded_by="XM_041468682.1:259..1518"
                     /db_xref="GeneID:121354243"
ORIGIN      
        1 melkvwvdgv qrivcgvtev ttcqevvial aqaigrtgry tliekwrdte rhlaphenpi
       61 vslnkwgqya sdvqlilrrt gpslserpts dgvaripert lyrqslppla klrqpgdkam
      121 krrepkrksl tftggakglm difgkskese fkqkvlnnck ttvdelkkli hlqteklqci
      181 ekqlesneae iryweqkyna sleeeilkle qkikrnevei eeeefwenel qieqenekql
      241 meqlqemrqr ilecenklkd yvsqihnmes gleaeklqre vqesqvneee vkekiekvkg
      301 eidiqgqqsl rlengikave rslgqatkrl qdreqeleql tkelrqvnlq qfiqqtgtkv
      361 tvlpadpvev eaphvelere pafqsgslkr pgssrqlpsn lrilqnplss gfnpegiyv
//
LOCUS       XP_041324617             419 aa            linear   VRT 06-MAY-2021
DEFINITION  ras association domain-containing protein 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324617
VERSION     XP_041324617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468683.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="ras association domain-containing protein 8"
                     /calculated_mol_wt=48339
     Region          2..83
                     /region_name="RA_RASSF8"
                     /note="Ras-associating (RA) domain found in N-terminal
                     Ras-association domain family 8 (RASSF8); cd16134"
                     /db_xref="CDD:340551"
     Region          <145..>351
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..419
                     /gene="RASSF8"
                     /coded_by="XM_041468683.1:375..1634"
                     /db_xref="GeneID:121354243"
ORIGIN      
        1 melkvwvdgv qrivcgvtev ttcqevvial aqaigrtgry tliekwrdte rhlaphenpi
       61 vslnkwgqya sdvqlilrrt gpslserpts dgvaripert lyrqslppla klrqpgdkam
      121 krrepkrksl tftggakglm difgkskese fkqkvlnnck ttvdelkkli hlqteklqci
      181 ekqlesneae iryweqkyna sleeeilkle qkikrnevei eeeefwenel qieqenekql
      241 meqlqemrqr ilecenklkd yvsqihnmes gleaeklqre vqesqvneee vkekiekvkg
      301 eidiqgqqsl rlengikave rslgqatkrl qdreqeleql tkelrqvnlq qfiqqtgtkv
      361 tvlpadpvev eaphvelere pafqsgslkr pgssrqlpsn lrilqnplss gfnpegiyv
//
LOCUS       XP_041324618             419 aa            linear   VRT 06-MAY-2021
DEFINITION  ras association domain-containing protein 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324618
VERSION     XP_041324618.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468684.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="ras association domain-containing protein 8"
                     /calculated_mol_wt=48339
     Region          2..83
                     /region_name="RA_RASSF8"
                     /note="Ras-associating (RA) domain found in N-terminal
                     Ras-association domain family 8 (RASSF8); cd16134"
                     /db_xref="CDD:340551"
     Region          <145..>351
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..419
                     /gene="RASSF8"
                     /coded_by="XM_041468684.1:690..1949"
                     /db_xref="GeneID:121354243"
ORIGIN      
        1 melkvwvdgv qrivcgvtev ttcqevvial aqaigrtgry tliekwrdte rhlaphenpi
       61 vslnkwgqya sdvqlilrrt gpslserpts dgvaripert lyrqslppla klrqpgdkam
      121 krrepkrksl tftggakglm difgkskese fkqkvlnnck ttvdelkkli hlqteklqci
      181 ekqlesneae iryweqkyna sleeeilkle qkikrnevei eeeefwenel qieqenekql
      241 meqlqemrqr ilecenklkd yvsqihnmes gleaeklqre vqesqvneee vkekiekvkg
      301 eidiqgqqsl rlengikave rslgqatkrl qdreqeleql tkelrqvnlq qfiqqtgtkv
      361 tvlpadpvev eaphvelere pafqsgslkr pgssrqlpsn lrilqnplss gfnpegiyv
//
LOCUS       XP_041324619             419 aa            linear   VRT 06-MAY-2021
DEFINITION  ras association domain-containing protein 8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324619
VERSION     XP_041324619.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468685.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522206.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="ras association domain-containing protein 8"
                     /calculated_mol_wt=48339
     Region          2..83
                     /region_name="RA_RASSF8"
                     /note="Ras-associating (RA) domain found in N-terminal
                     Ras-association domain family 8 (RASSF8); cd16134"
                     /db_xref="CDD:340551"
     Region          <145..>351
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..419
                     /gene="RASSF8"
                     /coded_by="XM_041468685.1:581..1840"
                     /db_xref="GeneID:121354243"
ORIGIN      
        1 melkvwvdgv qrivcgvtev ttcqevvial aqaigrtgry tliekwrdte rhlaphenpi
       61 vslnkwgqya sdvqlilrrt gpslserpts dgvaripert lyrqslppla klrqpgdkam
      121 krrepkrksl tftggakglm difgkskese fkqkvlnnck ttvdelkkli hlqteklqci
      181 ekqlesneae iryweqkyna sleeeilkle qkikrnevei eeeefwenel qieqenekql
      241 meqlqemrqr ilecenklkd yvsqihnmes gleaeklqre vqesqvneee vkekiekvkg
      301 eidiqgqqsl rlengikave rslgqatkrl qdreqeleql tkelrqvnlq qfiqqtgtkv
      361 tvlpadpvev eaphvelere pafqsgslkr pgssrqlpsn lrilqnplss gfnpegiyv
//
LOCUS       XP_041324620             176 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 436-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324620
VERSION     XP_041324620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522251.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..176
                     /product="zinc finger protein 436-like"
                     /calculated_mol_wt=21013
     Region          15..35
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <40..176
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          43..63
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          71..91
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          99..119
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(104,106,108,110..111,114..115,118,132,134,138..139,
                     142..143,146,160,162,164,166..167,170..171,174)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          127..147
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          155..175
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..176
                     /gene="LOC121354245"
                     /coded_by="XM_041468686.1:122..652"
                     /db_xref="GeneID:121354245"
ORIGIN      
        1 mehqrihtge spfecsmcgi sfrqrskliq hkrthtgerp yecdkcrkrf ktsshllrhy
       61 qthteerpfh cpdcgkgfwr nsdiishqri htgerpyecd kcrkgyktss hliqhyriht
      121 eerpfrcpdc gkgftykgtl vthrrihtge rpykcgecgk rfsrsshltq hqrrhh
//
LOCUS       XP_041324622             659 aa            linear   VRT 06-MAY-2021
DEFINITION  carnosine synthase 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324622
VERSION     XP_041324622.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468688.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522284.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..659
                     /product="carnosine synthase 1-like"
                     /calculated_mol_wt=70685
     Region          284..541
                     /region_name="AccC"
                     /note="Biotin carboxylase [Lipid transport and
                     metabolism]; COG0439"
                     /db_xref="CDD:440208"
     CDS             1..659
                     /gene="LOC121354246"
                     /coded_by="XM_041468688.1:1..1980"
                     /db_xref="GeneID:121354246"
ORIGIN      
        1 mtvamlyhsl pgarlgrghh gatgspkrpr rrgrsgratl sphggracpv pcppgspapr
       61 lpmalrictl vcrswgdrpq lcqvacavgr aespvrhgaa lpqgldsslq qwgvvapsqr
      121 qalatrlrea teaaaaalla seaelsprqr ggsrahtdil gvdfllacvd dalelvalat
      181 ngqrcletcv laeamgrgvg eprgelprll aeamlhraqr hlvegkdill igaggvsksf
      241 vweaardygl rihlvesdpe hfaaglvqtf lpydsrehrr deehaervle llrsrglrph
      301 aclsywddcv vlaalvcqgl glrgpapaav rvakqksrth rhlqrcrrgr pppaafavpc
      361 rrlrshgdve raagavpfpa vaklefgagg vgvrlvenag qchahaarlw rdlrddadhp
      421 giglgwgnam llmeyvpgte hdvdlvvfeg rllgawvsdn gptrvpafle taaclpsclp
      481 adrqaqlvra alqccracgl rdgvfnvelk lgpagprlle inprmggfyl rdwirevygp
      541 dlllaavlva lgvppvlpar paprthlagv mclasehges laggggmqal relhgrglvr
      601 lnrlfeepeg ageyeeplls vacagatlae acerllglcq glgidspryp vehflshfk
//
LOCUS       XP_041324623             806 aa            linear   VRT 06-MAY-2021
DEFINITION  transitional endoplasmic reticulum ATPase [Pyrgilauda ruficollis].
ACCESSION   XP_041324623
VERSION     XP_041324623.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468689.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..806
                     /product="transitional endoplasmic reticulum ATPase"
                     /calculated_mol_wt=89194
     Region          25..764
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..806
                     /gene="LOC121354247"
                     /coded_by="XM_041468689.1:44..2464"
                     /db_xref="GeneID:121354247"
ORIGIN      
        1 masgsdskad dlstailkqk nrpnrlivde ainednsvvs lsqakmdelq lfrgdtvllk
       61 gkkrreavci vlsddtcsde kirmnrvvrn nlrvrlgdvi siqpcpdvky gkrihvlpid
      121 dtvegitgnl fevylkpyfl eayrpirkgd iflvrggmra vefkvvetdp spycivapdt
      181 vihcegepik redeeeslne vgyddiggcr kqlaqikemv elplrhpalf kaigvkpprg
      241 illygppgtg ktliaravan etgaffflin gpeimsklag esesnlrkaf eeaeknapai
      301 ifideldaia pkrekthgev errivsqllt lmdglkqrah vivmaatnrp nsidpalrrf
      361 grfdrevdig ipdatgrlei lqihtknmkl addvdleqva nethghvgad laalcseaal
      421 qairkkmdli dledetidae vmnslavtmd dfrwalsqsn psalretvve vpqvtwedig
      481 gledvkrelq elvqypvehp dkflkfgmtp skgvlfygpp gcgktllaka ianecqanfi
      541 sikgpelltm wfgeseanvr eifdkarqaa pcvlffdeld siakarggni gdgggaadrv
      601 inqiltemdg mstkknvfii gatnrpdiid pailrpgrld qliyiplpde ksrvailkan
      661 lrkspvakdv dldflakmtn gfsgadltei cqracklair esieseirre rerqtnpsam
      721 eveeddpvpe irrdhfeeam rfarrsvsdn dirkyemfaq tlqqsrgfgs frfpsgnqgg
      781 agpsqgtggg sggnvysedn dddlyg
//
LOCUS       XP_041324624             347 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily B member 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324624
VERSION     XP_041324624.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468690.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="dnaJ homolog subfamily B member 5"
                     /calculated_mol_wt=39163
     Region          4..342
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..347
                     /gene="DNAJB5"
                     /coded_by="XM_041468690.1:295..1338"
                     /db_xref="GeneID:121354248"
ORIGIN      
        1 mgkdyykilg iqsganedei kkayrkmalk yhpdknkdpn aeekfkeiae aydvlsdpkk
       61 ravydqygee glktgggssg gsgntfhytf hgdphatfas ffggsnpfdi ffassrsrmf
      121 ngfdqedmdm dddddpfsaf grfgfnging vhrrhqeslh trrkvqdppv ihelkvflee
      181 iyhgstkrmk itrrrlnadg rtmrtedkil nivikrgwke gtkitfpkeg datpdnipad
      241 ivfilkdkph shfkrdgtnv iytanislke alcgctvnip tidgrviplp cndiikpgtv
      301 krlrgeglpf pkapsqrgdl ivefkirfpd riapqtrqil kqhlpcs
//
LOCUS       XP_041324625             347 aa            linear   VRT 06-MAY-2021
DEFINITION  dnaJ homolog subfamily B member 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324625
VERSION     XP_041324625.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468691.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="dnaJ homolog subfamily B member 5"
                     /calculated_mol_wt=39163
     Region          4..342
                     /region_name="DnaJ_bact"
                     /note="chaperone protein DnaJ; TIGR02349"
                     /db_xref="CDD:274090"
     CDS             1..347
                     /gene="DNAJB5"
                     /coded_by="XM_041468691.1:56..1099"
                     /db_xref="GeneID:121354248"
ORIGIN      
        1 mgkdyykilg iqsganedei kkayrkmalk yhpdknkdpn aeekfkeiae aydvlsdpkk
       61 ravydqygee glktgggssg gsgntfhytf hgdphatfas ffggsnpfdi ffassrsrmf
      121 ngfdqedmdm dddddpfsaf grfgfnging vhrrhqeslh trrkvqdppv ihelkvflee
      181 iyhgstkrmk itrrrlnadg rtmrtedkil nivikrgwke gtkitfpkeg datpdnipad
      241 ivfilkdkph shfkrdgtnv iytanislke alcgctvnip tidgrviplp cndiikpgtv
      301 krlrgeglpf pkapsqrgdl ivefkirfpd riapqtrqil kqhlpcs
//
LOCUS       XP_041324626             362 aa            linear   VRT 06-MAY-2021
DEFINITION  ciliary neurotrophic factor receptor subunit alpha [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324626
VERSION     XP_041324626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="ciliary neurotrophic factor receptor subunit
                     alpha"
                     /calculated_mol_wt=40129
     Region          35..87
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          40..44
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          70..74
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          202..298
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(202,270,286)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(288..289,291..292)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..362
                     /gene="CNTFR"
                     /coded_by="XM_041468692.1:17..1105"
                     /db_xref="GeneID:121354249"
ORIGIN      
        1 manpvpsacc vvlaavvvvy aqrhsqqdsh iqyervgadv tmkcgsmdwd aavtwtangt
       61 dideshlngs ylilknvdls qsgqyscyeg sswhlkyqtt lrvgtppkep vlmcrsnnyp
      121 kgfycswhlp tptyipnsfn isvihgtkdm vcekdavpkn rchiryiqlf stvkykvtlt
      181 vtnalgknft tltfdefaiv kpdppesvva kpvpnnprrl evswqnpssw pdpesfplkf
      241 flryrplild qwqhvelsdg tshtitdaya gkeyiiqvaa kdndigtwsd wsvavhatpw
      301 teepkhltte aqitettsas tssfmapptt kicdkgamvg sgamavcwta glvmaaysvl
      361 fi
//
LOCUS       XP_041324627             118 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C motif chemokine 21-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324627
VERSION     XP_041324627.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468693.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="C-C motif chemokine 21-like"
                     /calculated_mol_wt=13142
     Region          30..90
                     /region_name="IL8"
                     /note="Small cytokines (intecrine/chemokine),
                     interleukin-8 like; pfam00048"
                     /db_xref="CDD:459650"
     CDS             1..118
                     /gene="LOC121354250"
                     /coded_by="XM_041468693.1:47..403"
                     /db_xref="GeneID:121354250"
ORIGIN      
        1 malrpfllll lllaatllit qaqgigssal dcclknrplk keisgvvtsy rlqgpesgcy
       61 lravvlitkk nrkicasptd dtvqklmqql dkkdkndksr kkgqrprgrp kkqrrqra
//
LOCUS       XP_041324628             361 aa            linear   VRT 06-MAY-2021
DEFINITION  stomatin-like protein 2, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324628
VERSION     XP_041324628.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468694.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="stomatin-like protein 2, mitochondrial"
                     /calculated_mol_wt=39505
     Region          44..319
                     /region_name="HflC"
                     /note="Regulator of protease activity HflC,
                     stomatin/prohibitin superfamily [Posttranslational
                     modification, protein turnover, chaperones]; COG0330"
                     /db_xref="CDD:440099"
     CDS             1..361
                     /gene="STOML2"
                     /coded_by="XM_041468694.1:70..1155"
                     /db_xref="GeneID:121354251"
ORIGIN      
        1 mlsragirar pglgllqhsq qlkhaarlap apcrwnsglp mnigvlfvpq qeawvvermg
       61 kfhrilepgl nfliplldri ryvqslkeiv invpeqsavt ldnvtlqidg vlylrvmdpy
      121 kasygvedpe yavtqlaqtt mrselgklsl drvfreresl nasivdainq asdcwgircl
      181 ryeikdihvp prvkesmqmq veaerrkrat vlesegtres ainvaegqkq aqilaseaqk
      241 aeqinkaage anamlvkara kaeaiqllaa alsqqhgnaa aslsvaeqyv nafskiakdt
      301 ntvllpantg dvtnmvaqal giyttltkpq avktqdempp aheeshspat evlkaekgss
      361 s
//
LOCUS       XP_041324630             507 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protein FAM214B [Pyrgilauda ruficollis].
ACCESSION   XP_041324630
VERSION     XP_041324630.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468696.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="LOW QUALITY PROTEIN: protein FAM214B"
                     /calculated_mol_wt=55084
     Region          449..506
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..507
                     /gene="FAM214B"
                     /coded_by="XM_041468696.1:1054..2577"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121354252"
ORIGIN      
        1 mrhihtetsl pperstepsl srprgetple pssqccthrs ilmgynetei krqkvyqvsi
       61 fshlsssses meqragtrpa vkrgypeqrt leggrdpkrt hwgdrgvdgg pgqpsldddd
      121 tfedgllvee lslcgsaqhf shsglrvveh rcegspshsp kasredksqd vsfssfssss
      181 sssssswpqh iacstlhmrd scpvssgdqp idygengepa sghnvlhldl hsiaqttqld
      241 pggkrdkpgs spahssrage aegpavangc respvpqtal spepsslssq emtpcgssql
      301 sstcpakrkl lpagevmads csedeslspp arkkrvlpch pvptacrstd akgapfwnhl
      361 lpaaksssdc talgkkgysv pkagtiqvtl fnpnktvvkm flvtydfqdm panhmtflrh
      421 riflvpvgee egctvapsdp lgtnpprrvl cylmhlrfhs sksgkiylhd dirllfsrks
      481 ievdsgipye lksftemprn pcyspra
//
LOCUS       XP_041324631            1087 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI ethanolamine phosphate transferase 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324631
VERSION     XP_041324631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1087
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1087
                     /product="GPI ethanolamine phosphate transferase 3 isoform
                     X1"
                     /calculated_mol_wt=121006
     Region          63..338
                     /region_name="GPI_EPT_3"
                     /note="GPI ethanolamine phosphate transferase 3, PIG-O;
                     cd16023"
                     /db_xref="CDD:293747"
     Site            order(75,125,229,271..272)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293747"
     Site            order(75,125,229,272)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293747"
     Region          <942..1051
                     /region_name="PIGO_PIGG"
                     /note="GPI ethanolamine phosphate transferase membrane
                     region; pfam19316"
                     /db_xref="CDD:437148"
     CDS             1..1087
                     /gene="PIGO"
                     /coded_by="XM_041468697.1:119..3382"
                     /db_xref="GeneID:121354253"
ORIGIN      
        1 mqrwpvvlfl awvcflffag iglfmsgfll trielassss csdplvpplw erqslppgsc
       61 wapqrfskav lviidalhfe farfdpakas plpyenklgv lhqlatsqpr harlyrfrad
      121 pptatmqrik glttgslptf idvgnnfasy aiqednllaq lvqngrrvvf mgddtweglf
      181 pkkffrsyff psfnvkdlht vddgilqhly ptvdsgewdv liahflgvdh cghkhgpdhp
      241 emakkltqmn emlrslvdhl gndtlllvag dhgmtetgdh ggdsekevna alfvysrtpl
      301 fgsgppeepe tipqvnlvpt valllgvpip ysnigevmae lfagdgdavs aalqqlsvyh
      361 inakqvdrfl qsyslvaqdl paeqlqhlqe lfssaveehm qlltqvqgtt vppelkarlg
      421 slisrfqryl rearavctqs warfhplrmv ggcvliassc llcymasela vssqslchsc
      481 llyplfwgpv gaallwlvhv ftqeeldlll vsswaaaasq lgffwhwwgq hlkrarltgs
      541 qpplasgglr qrlrawlgla fpmgilffrc gamfsdsfvv aearvapfll aslvmllvgk
      601 lhwdghltvp egpkqqllgv ssyrreiwyl lclvamllvc vrlssffhqc reeipqcrps
      661 vflsplaslr ntraknlfyl lcvallaglv yavqswlrhy gnlnssdplv lfvrwgfplv
      721 vlciacywav assaddslgk lqelvqvavv vfpravygla svglllllcn pmtvfakdtr
      781 esagsivtpy lgvpgsevdf lhvipqiykr mqesqksrle rgscratvaa yglgsvysaa
      841 lvialtllgf llmllhserl sfaflllfve afvllhihtc arglagdael fsvpwyavis
      901 wllaasqffy stghqpifpa ihwnaafvgf hldhsmnvlp avlvgantfa shilfavgcp
      961 llllwpfvce msnsqrkkpk kesrealqev eehmmemrlr espeefstal lrlglkylfv
     1021 lgaqllacvc aamilrrhlm vwkvfapkfl feslgfvvss iclllgislv mrvdcavstw
     1081 fsqlrlr
//
LOCUS       XP_041324632            1063 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI ethanolamine phosphate transferase 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324632
VERSION     XP_041324632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1063
                     /product="GPI ethanolamine phosphate transferase 3 isoform
                     X2"
                     /calculated_mol_wt=118198
     Region          63..338
                     /region_name="GPI_EPT_3"
                     /note="GPI ethanolamine phosphate transferase 3, PIG-O;
                     cd16023"
                     /db_xref="CDD:293747"
     Site            order(75,125,229,271..272)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:293747"
     Site            order(75,125,229,272)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:293747"
     Region          <918..1027
                     /region_name="PIGO_PIGG"
                     /note="GPI ethanolamine phosphate transferase membrane
                     region; pfam19316"
                     /db_xref="CDD:437148"
     CDS             1..1063
                     /gene="PIGO"
                     /coded_by="XM_041468698.1:72..3263"
                     /db_xref="GeneID:121354253"
ORIGIN      
        1 mqrwpvvlfl awvcflffag iglfmsgfll trielassss csdplvpplw erqslppgsc
       61 wapqrfskav lviidalhfe farfdpakas plpyenklgv lhqlatsqpr harlyrfrad
      121 pptatmqrik glttgslptf idvgnnfasy aiqednllaq lvqngrrvvf mgddtweglf
      181 pkkffrsyff psfnvkdlht vddgilqhly ptvdsgewdv liahflgvdh cghkhgpdhp
      241 emakkltqmn emlrslvdhl gndtlllvag dhgmtetgdh ggdsekevna alfvysrtpl
      301 fgsgppeepe tipqvnlvpt valllgvpip ysnigevmae lfagdgdavs aalqqlsvyh
      361 inakqvdrfl qsyslvaqdl paeqlqhlqe lfssaveehm qlltqvqgtt vppelkarlg
      421 slisrfqryl rearavctqs warfhplrmv ggcvliassc llcymasela vssqslchsc
      481 llyplfwgpv gaallwlvhv ftqeeldlll vsswaaaasq lgffwhwwgq hlkrarltgs
      541 qpplasgglr qrlrawlgla fpmgilffrc gamfsdsfvv aearvapfll aslvmllvgk
      601 lhwdghltvp egpkqqllgv ssyrreiwyl lclvamllvc vrlssffhqc reeipqcrps
      661 vflsplaslr ntraknlfyl lcvallaglv yavqswlrhy gnlnssdplv lfvrwgfplv
      721 vlciacywav assaddslgk lqelvqvavv vfpravygla svglllllcn pmtvfakdtr
      781 esagsivtpy lgvpgsevdf lhvipqiykr mqesqksrle rgscratvaa yglgsvysaa
      841 lvialtllgf llmllhserl sfaflllfve afvllhihtc arglagdagh qpifpaihwn
      901 aafvgfhldh smnvlpavlv gantfashil favgcpllll wpfvcemsns qrkkpkkesr
      961 ealqeveehm memrlrespe efstallrlg lkylfvlgaq llacvcaami lrrhlmvwkv
     1021 fapkflfesl gfvvssicll lgislvmrvd cavstwfsql rlr
//
LOCUS       XP_041324633              99 aa            linear   VRT 06-MAY-2021
DEFINITION  C-C motif chemokine 19-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324633
VERSION     XP_041324633.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468699.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..99
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..99
                     /product="C-C motif chemokine 19-like"
                     /calculated_mol_wt=11096
     Region          27..86
                     /region_name="IL8"
                     /note="Small cytokines (intecrine/chemokine),
                     interleukin-8 like; pfam00048"
                     /db_xref="CDD:459650"
     CDS             1..99
                     /gene="LOC121354254"
                     /coded_by="XM_041468699.1:64..363"
                     /db_xref="GeneID:121354254"
ORIGIN      
        1 mqwlhllcfs llllghildv htgnnvldcc lrtseapipr rivqdyrlql vqdgcdipaa
       61 vfittkgkrl caplhspwvi rlqerldass ikrskpqgk
//
LOCUS       XP_041324634             400 aa            linear   VRT 06-MAY-2021
DEFINITION  PHD finger protein 24 [Pyrgilauda ruficollis].
ACCESSION   XP_041324634
VERSION     XP_041324634.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468700.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..400
                     /product="PHD finger protein 24"
                     /calculated_mol_wt=45736
     Region          124..195
                     /region_name="zf-RING_15"
                     /note="KIAA1045 RING finger; pfam16744"
                     /db_xref="CDD:407013"
     Region          238..>313
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..400
                     /gene="PHF24"
                     /coded_by="XM_041468700.1:131..1333"
                     /db_xref="GeneID:121354255"
ORIGIN      
        1 mgvlmsrrqt vervqkvsla vsafkdglre qpstrrraea gtarqgtleq evqegeeeal
       61 agpsqpeess askaawerlr dgrgvepeef dranrftppa firpkrelhd deppdisleq
      121 reqiqndemc eicevwtaes lfpcrichrv yhdgclrrmg ylqkdsavev tetahtetgw
      181 scyycdnlnl llteeemysl metlknckii pescltlddf lhykhqvhkq qfertmpeaq
      241 eeqaalqfna ldpdkkghie wqdflshesi qllqkirpqn allrlltpke rerartafla
      301 ldqdndgfig eaecrqarht wfrkhqkeml scnvsishvg pisegspass rngkspekil
      361 patkqeetrs idwpgflren vayilaarpn saalhlqpla
//
LOCUS       XP_041324635             413 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-11 receptor subunit alpha isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324635
VERSION     XP_041324635.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468701.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="interleukin-11 receptor subunit alpha isoform
                     X1"
                     /calculated_mol_wt=45270
     Region          39..104
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          44..48
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          56..60
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          90..95
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          111..>149
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          <188..>313
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..413
                     /gene="IL11RA"
                     /coded_by="XM_041468701.1:135..1376"
                     /db_xref="GeneID:121354256"
ORIGIN      
        1 mrssipglgr vmvflaaala sasfaipedw geegvqygql gtdvtlscpg vrasspvrwr
       61 ragatalpeg saiqqgslvl lstslasagt yschgedggl lhsvslrlgh lpgvpfvscr
      121 asdyenfscs wtssvdtflp tryittyrkk sltgeekrrn knghvglclq dpsrpgtctv
      181 hrsefwssyr lnitevnplg fsyrlldvtm qaiikpdppe glvvepvpla prrlhvswky
      241 psswpkephf qlrfrlqyrp vihrswsvve tvnlsevitd afaglehvvq vsakdfldag
      301 nwsewsaear atpvrdlast aseetttdar leslaeepsq apnpepinrs dplekmavlv
      361 slgifaffil aavlvitili wlrvrkhgkd ktkpsflvaa thlkalptea qil
//
LOCUS       XP_041324636             413 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-11 receptor subunit alpha isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324636
VERSION     XP_041324636.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468702.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="interleukin-11 receptor subunit alpha isoform
                     X1"
                     /calculated_mol_wt=45270
     Region          39..104
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          44..48
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          56..60
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          90..95
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          111..>149
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          <188..>313
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..413
                     /gene="IL11RA"
                     /coded_by="XM_041468702.1:21..1262"
                     /db_xref="GeneID:121354256"
ORIGIN      
        1 mrssipglgr vmvflaaala sasfaipedw geegvqygql gtdvtlscpg vrasspvrwr
       61 ragatalpeg saiqqgslvl lstslasagt yschgedggl lhsvslrlgh lpgvpfvscr
      121 asdyenfscs wtssvdtflp tryittyrkk sltgeekrrn knghvglclq dpsrpgtctv
      181 hrsefwssyr lnitevnplg fsyrlldvtm qaiikpdppe glvvepvpla prrlhvswky
      241 psswpkephf qlrfrlqyrp vihrswsvve tvnlsevitd afaglehvvq vsakdfldag
      301 nwsewsaear atpvrdlast aseetttdar leslaeepsq apnpepinrs dplekmavlv
      361 slgifaffil aavlvitili wlrvrkhgkd ktkpsflvaa thlkalptea qil
//
LOCUS       XP_041324637             412 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-11 receptor subunit alpha isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324637
VERSION     XP_041324637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..412
                     /product="interleukin-11 receptor subunit alpha isoform
                     X2"
                     /calculated_mol_wt=45168
     Region          39..104
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          44..48
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          56..60
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          90..95
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          111..>149
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          <188..>313
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     CDS             1..412
                     /gene="IL11RA"
                     /coded_by="XM_041468703.1:135..1373"
                     /db_xref="GeneID:121354256"
ORIGIN      
        1 mrssipglgr vmvflaaala sasfaipedw geegvqygql gtdvtlscpg vrasspvrwr
       61 ragatalpeg saiqqgslvl lstslasagt yschgedggl lhsvslrlgh lpgvpfvscr
      121 asdyenfscs wtssvdtflp tryittyrkk sltgeekrrn knghvglclq dpsrpgtctv
      181 hrsefwssyr lnitevnplg fsyrlldvtm qaiikpdppe glvvepvpla prrlhvswky
      241 psswpkephf qlrfrlqyrp vihrswsvve tvnlsevitd afaglehvvq vsakdfldag
      301 nwsewsaear atpvrdlast aseetttdar leslaeepsq apnpepinrs dplekmavlv
      361 slgifaffil aavlvitili wlrvrkhgkd ktkpsflvaa thlkalpkaq il
//
LOCUS       XP_041324638             663 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group G protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324638
VERSION     XP_041324638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468704.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522317.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..663
                     /product="Fanconi anemia group G protein"
                     /calculated_mol_wt=72381
     Region          215..>395
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Region          230..256
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(232..233,236..237,239,266,269..270,273..274,
                     276..277,300,303..304,307..308,311)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          262..294
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          299..329
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          413..658
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          491..519
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(492,495..496,499..500,502,550,553..554,557..558,
                     560..561,584,587..588,591..592,595)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          548..578
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          583..608
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..663
                     /gene="FANCG"
                     /coded_by="XM_041468704.1:1..1992"
                     /db_xref="GeneID:121354258"
ORIGIN      
        1 maaamkrrrg mepepepepe pepepepeqg clrawaahsr alvgrwttar cggearqarr
       61 qlrdefrell rsirglpaal palpleltvl ynsllftvga sdsaikeeae girqgllrvl
      121 evcgacgqdl gteelwekvl qevtveelqa plhhlgalqa awwlaasqlg svaglfqlls
      181 taedpggahc segqnellsm ikawqvppeg aslplvqsak dlkeilctaa aflqglqele
      241 agnfptalsl lqeaaggfcs knilaqiytc lgccaqqmgk pqtalqhlkr alqvdfqclp
      301 alshvaavyh elgetdaelq altilyealg knppaaasss phflmqiell vhtpvltsll
      361 rhrhpsevky llaqrclqdg rvadavehyl dflsllqegl qqqvpldsss alpripevfl
      421 eaasaleqag rhqdaitvce evisqttdli prvlwveerl eqpesslpga elagallsqk
      481 keslcclawr aagylhqgwa waklgeskea vtqfsrclsd llrvqlhgsg ikqtenlqpe
      541 vevlqkirll sligrgtqfl elgrnkeall dfqhslqisp gdpaaasylv qalwklnrkq
      601 eaaaqwqkfs qsspgedgqq qgqgrplply lascleqavf pdseplarsi qdylraaahd
      661 tss
//
LOCUS       XP_041324639             464 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase 38-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324639
VERSION     XP_041324639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="serine/threonine-protein kinase 38-like isoform
                     X1"
                     /calculated_mol_wt=53786
     Region          12..86
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     Site            order(24..25,27..29,31..32,35..36,39,42,46,71,74..76,
                     78..79,82..83)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439267"
     Region          87..452
                     /region_name="STKc_NDR2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Nuclear Dbf2-Related kinase 2; cd05627"
                     /db_xref="CDD:270776"
     Site            order(96..100,104,117,119,151,167..168,170,174,176,213,
                     215,217..218,220,230..231,234,283..288,315,321,324)
                     /site_type="active"
                     /db_xref="CDD:270776"
     Site            order(96..100,104,117,119,151,168..170,174,213,215,
                     217..218,220,230..231)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270776"
     Site            order(100,174,176,213,215,217,234,283..288,315,321,324)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270776"
     Site            order(230..242,279..288)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270776"
     Site            438..443
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270776"
     CDS             1..464
                     /gene="STK38L"
                     /coded_by="XM_041468705.1:12..1406"
                     /db_xref="GeneID:121354259"
ORIGIN      
        1 mamtagttts fpmsnhtrer vtvakltlen fysnlilqhe eretrqkkle vameeeglad
       61 eekklrrsqh arketeflrl krtrlglddf eslkvigrga fgevrlvqkk dtghiyamki
      121 lrkadmleke qvahiraerd ilveadgawv vkmfysfqdk rnlylimefl pggdmmtllm
      181 kkdtlseeet qfyisetvla idaihqlgfi hrdikpdnll ldakghvkls dfglctglkk
      241 ahrtefyrnl thnppsdfsf qnmnskrkae twkknrrqla ystvgtpdyi apevfmqtgy
      301 nklcdwwslg vimyemligy ppfcsetpqe tyrkvmnwke tlvfppevpi sekakdlilr
      361 fcidsenrig sngveeiksh pffegvdwgh irerpaaipi eiksiddtsn fdefpesdil
      421 qpvpnttepd ykskdwvfln ytykrfeglt qrgsipsymk agkl
//
LOCUS       XP_041324640             464 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase 38-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324640
VERSION     XP_041324640.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468706.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="serine/threonine-protein kinase 38-like isoform
                     X1"
                     /calculated_mol_wt=53786
     Region          12..86
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     Site            order(24..25,27..29,31..32,35..36,39,42,46,71,74..76,
                     78..79,82..83)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439267"
     Region          87..452
                     /region_name="STKc_NDR2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Nuclear Dbf2-Related kinase 2; cd05627"
                     /db_xref="CDD:270776"
     Site            order(96..100,104,117,119,151,167..168,170,174,176,213,
                     215,217..218,220,230..231,234,283..288,315,321,324)
                     /site_type="active"
                     /db_xref="CDD:270776"
     Site            order(96..100,104,117,119,151,168..170,174,213,215,
                     217..218,220,230..231)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270776"
     Site            order(100,174,176,213,215,217,234,283..288,315,321,324)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270776"
     Site            order(230..242,279..288)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270776"
     Site            438..443
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270776"
     CDS             1..464
                     /gene="STK38L"
                     /coded_by="XM_041468706.1:12..1406"
                     /db_xref="GeneID:121354259"
ORIGIN      
        1 mamtagttts fpmsnhtrer vtvakltlen fysnlilqhe eretrqkkle vameeeglad
       61 eekklrrsqh arketeflrl krtrlglddf eslkvigrga fgevrlvqkk dtghiyamki
      121 lrkadmleke qvahiraerd ilveadgawv vkmfysfqdk rnlylimefl pggdmmtllm
      181 kkdtlseeet qfyisetvla idaihqlgfi hrdikpdnll ldakghvkls dfglctglkk
      241 ahrtefyrnl thnppsdfsf qnmnskrkae twkknrrqla ystvgtpdyi apevfmqtgy
      301 nklcdwwslg vimyemligy ppfcsetpqe tyrkvmnwke tlvfppevpi sekakdlilr
      361 fcidsenrig sngveeiksh pffegvdwgh irerpaaipi eiksiddtsn fdefpesdil
      421 qpvpnttepd ykskdwvfln ytykrfeglt qrgsipsymk agkl
//
LOCUS       XP_041324641             464 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase 38-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324641
VERSION     XP_041324641.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468707.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="serine/threonine-protein kinase 38-like isoform
                     X1"
                     /calculated_mol_wt=53786
     Region          12..86
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     Site            order(24..25,27..29,31..32,35..36,39,42,46,71,74..76,
                     78..79,82..83)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439267"
     Region          87..452
                     /region_name="STKc_NDR2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Nuclear Dbf2-Related kinase 2; cd05627"
                     /db_xref="CDD:270776"
     Site            order(96..100,104,117,119,151,167..168,170,174,176,213,
                     215,217..218,220,230..231,234,283..288,315,321,324)
                     /site_type="active"
                     /db_xref="CDD:270776"
     Site            order(96..100,104,117,119,151,168..170,174,213,215,
                     217..218,220,230..231)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270776"
     Site            order(100,174,176,213,215,217,234,283..288,315,321,324)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270776"
     Site            order(230..242,279..288)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270776"
     Site            438..443
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270776"
     CDS             1..464
                     /gene="STK38L"
                     /coded_by="XM_041468707.1:12..1406"
                     /db_xref="GeneID:121354259"
ORIGIN      
        1 mamtagttts fpmsnhtrer vtvakltlen fysnlilqhe eretrqkkle vameeeglad
       61 eekklrrsqh arketeflrl krtrlglddf eslkvigrga fgevrlvqkk dtghiyamki
      121 lrkadmleke qvahiraerd ilveadgawv vkmfysfqdk rnlylimefl pggdmmtllm
      181 kkdtlseeet qfyisetvla idaihqlgfi hrdikpdnll ldakghvkls dfglctglkk
      241 ahrtefyrnl thnppsdfsf qnmnskrkae twkknrrqla ystvgtpdyi apevfmqtgy
      301 nklcdwwslg vimyemligy ppfcsetpqe tyrkvmnwke tlvfppevpi sekakdlilr
      361 fcidsenrig sngveeiksh pffegvdwgh irerpaaipi eiksiddtsn fdefpesdil
      421 qpvpnttepd ykskdwvfln ytykrfeglt qrgsipsymk agkl
//
LOCUS       XP_041324642             433 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase 38-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324642
VERSION     XP_041324642.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468708.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..433
                     /product="serine/threonine-protein kinase 38-like isoform
                     X2"
                     /calculated_mol_wt=50165
     Region          12..86
                     /region_name="MobB_NDR_LATS-like"
                     /note="Mob-binding domain found in the NDR/LATS family
                     serine/threonine protein kinases; cl45907"
                     /db_xref="CDD:459252"
     Site            order(24..25,27..29,31..32,35..36,39,42,46,71,74..76,
                     78..79,82..83)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439267"
     Region          87..423
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(96..99,102,104,117,119,151,167..170,213,217..218,
                     220,230..231)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..433
                     /gene="STK38L"
                     /coded_by="XM_041468708.1:12..1313"
                     /db_xref="GeneID:121354259"
ORIGIN      
        1 mamtagttts fpmsnhtrer vtvakltlen fysnlilqhe eretrqkkle vameeeglad
       61 eekklrrsqh arketeflrl krtrlglddf eslkvigrga fgevrlvqkk dtghiyamki
      121 lrkadmleke qvahiraerd ilveadgawv vkmfysfqdk rnlylimefl pggdmmtllm
      181 kkdtlseeet qfyisetvla idaihqlgfi hrdikpdnll ldakghvkls dfglctglkk
      241 ahrtefyrnl thnppsdfsf qnmnskrkae twkknrrqla ystvgtpdyi apevfmqtgy
      301 nklcdwwslg vimyemligy ppfcsetpqe tyrkvmnwke tlvfppevpi sekakdlilr
      361 fcidsenrig sngveeiksh pffegvdwgh irerpaaipi eiksiddtsn fdefpesdil
      421 qpvssmghrv hwn
//
LOCUS       XP_041324643             706 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041324643
VERSION     XP_041324643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..706
                     /product="integrator complex subunit 13"
                     /calculated_mol_wt=80123
     Region          4..692
                     /region_name="Mat89Bb"
                     /note="Cell cycle and development regulator Mat89Bb;
                     pfam10221"
                     /db_xref="CDD:463006"
     CDS             1..706
                     /gene="INTS13"
                     /coded_by="XM_041468709.1:141..2261"
                     /db_xref="GeneID:121354261"
ORIGIN      
        1 mkifseshkt vfvvdhcpym aescrqhvef dmlvknrtqg iiplapisks lwtcsvessm
       61 eycrimydif pfkklvnfiv sdsgahvlns wtqedqnlqe lmaalaavgp pnpradpecc
      121 silhglvaav ealckiteyq yearttlmen aervgnrgri icitnaksds hvrmledcvq
      181 etihehnkla ansdhlmqiq kcelvlihty pvgedslvsd rpkkelspvl tsevhsvrag
      241 rhlatklnll vqqhfdlast titnipmkee qhantsanyd vellhhkeah vdflksgdnh
      301 vggnsregtf ketvtlkwct prtnsvelhy ctgayrispv dvnsrpsscl tnfllngrsv
      361 lleqprksgs kvishmlssh ggeiflhvls ssrsiledpp sisegcggrv tdyritdfge
      421 fmrenrltpf leprykidgs leiplerakd qlekhtrywp miisqttifn mqavvplasv
      481 ivketmtded vlncqktiyn lvdmerkndp lpvstvgtrg kgpkrdeqyr imwneletlv
      541 rahinnsdkh qrvleclmac rskppeeeer kkrgrkredk edkseklgkd yesdkpwqes
      601 erlkglldre keelaeaevi kdspdspepp nkkplitmde mptaekakgp msllslwsnr
      661 intansrkhq efigrlnsvn nkaelyqhlk eengmetten gkagrq
//
LOCUS       XP_041324644             563 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 7 superfamily member 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324644
VERSION     XP_041324644.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468710.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..563
                     /product="transmembrane 7 superfamily member 3 isoform X1"
                     /calculated_mol_wt=63109
     Region          289..496
                     /region_name="DUF4203"
                     /note="Domain of unknown function (DUF4203); pfam13886"
                     /db_xref="CDD:464018"
     CDS             1..563
                     /gene="TM7SF3"
                     /coded_by="XM_041468710.1:192..1883"
                     /db_xref="GeneID:121354262"
ORIGIN      
        1 mwvsslsall llligvlrhg gasgllelsl gkfrnvllnq tnpveavirn iasnvtvvif
       61 qvhahqsdvv isfdktplvn sseigvdkgl vsilrpeqtv ctwylralga gqvlstaisi
      121 pymekdpipg gcnlefdlev dpniyldytl vdihikfapa nlgytrganp pscdsgtgqs
      181 srwrlrydvy qyflpendls elvlmshmrk msgvqsvkan gikmltltad dktnvyfssl
      241 pgqgviynii vwdplwnssa ayipvhtyac sfadlvdncs slsklstkvf ftafavlglf
      301 tcffghrfwk tdlffmgfiv tafiffvfit rvtglsydvr liltavagii gglllvvsww
      361 rfgsvllsmf viglvlgflf sstlfftplg dyrvfhddvv fwvtftcval mipvlfvgcp
      421 rilnilasgi vgsytvvlai acyvytslay itldllrrvl nnyfsraytn vpfqrndfii
      481 lsvwamlgls gvtvqlrrer sevpfpphpy ltwkrererr stnvldpshh ipplrerihn
      541 kllhikeffq kdqpagertp lll
//
LOCUS       XP_041324645             536 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 7 superfamily member 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324645
VERSION     XP_041324645.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468711.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="transmembrane 7 superfamily member 3 isoform X2"
                     /calculated_mol_wt=59959
     Region          289..469
                     /region_name="DUF4203"
                     /note="Domain of unknown function (DUF4203); pfam13886"
                     /db_xref="CDD:464018"
     CDS             1..536
                     /gene="TM7SF3"
                     /coded_by="XM_041468711.1:192..1802"
                     /db_xref="GeneID:121354262"
ORIGIN      
        1 mwvsslsall llligvlrhg gasgllelsl gkfrnvllnq tnpveavirn iasnvtvvif
       61 qvhahqsdvv isfdktplvn sseigvdkgl vsilrpeqtv ctwylralga gqvlstaisi
      121 pymekdpipg gcnlefdlev dpniyldytl vdihikfapa nlgytrganp pscdsgtgqs
      181 srwrlrydvy qyflpendls elvlmshmrk msgvqsvkan gikmltltad dktnvyfssl
      241 pgqgviynii vwdplwnssa ayipvhtyac sfadlvdncs slsklstkvf ftafavlglf
      301 tcffghrfwk tvrliltava giigglllvv swwrfgsvll smfviglvlg flfsstlfft
      361 plgdyrvfhd dvvfwvtftc valmipvlfv gcprilnila sgivgsytvv laiacyvyts
      421 layitldllr rvlnnyfsra ytnvpfqrnd fiilsvwaml glsgvtvqlr rersevpfpp
      481 hpyltwkrer errstnvldp shhipplrer ihnkllhike ffqkdqpage rtplll
//
LOCUS       XP_041324646             217 aa            linear   VRT 06-MAY-2021
DEFINITION  FGFR1 oncogene partner 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324646
VERSION     XP_041324646.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468712.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..217
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..217
                     /product="FGFR1 oncogene partner 2 isoform X1"
                     /calculated_mol_wt=25085
     Region          4..185
                     /region_name="SIKE"
                     /note="SIKE family; pfam05769"
                     /db_xref="CDD:461735"
     CDS             1..217
                     /gene="FGFR1OP2"
                     /coded_by="XM_041468712.1:142..795"
                     /db_xref="GeneID:121354264"
ORIGIN      
        1 mkmtctieka ladakalver lrehdsaaea likqttalnk rveamkqyqe eiqelnevar
       61 hrprstlvmg iqqenrqire lqqenkelrt sleehqsale limskyreqm frllmaskkd
      121 dpsiimklke qhskelqvhv dqitemaavm rkaievderh sckeqeritq leqenkglre
      181 ilqitresfl nlkkddases tslsglvtss dlslrks
//
LOCUS       XP_041324647             215 aa            linear   VRT 06-MAY-2021
DEFINITION  FGFR1 oncogene partner 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324647
VERSION     XP_041324647.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468713.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="FGFR1 oncogene partner 2 isoform X2"
                     /calculated_mol_wt=24825
     Region          2..183
                     /region_name="SIKE"
                     /note="SIKE family; pfam05769"
                     /db_xref="CDD:461735"
     CDS             1..215
                     /gene="FGFR1OP2"
                     /coded_by="XM_041468713.1:237..884"
                     /db_xref="GeneID:121354264"
ORIGIN      
        1 mtctiekala dakalverlr ehdsaaeali kqttalnkrv eamkqyqeei qelnevarhr
       61 prstlvmgiq qenrqirelq qenkelrtsl eehqsaleli mskyreqmfr llmaskkddp
      121 siimklkeqh skelqvhvdq itemaavmrk aievderhsc keqeritqle qenkglreil
      181 qitresflnl kkddasests lsglvtssdl slrks
//
LOCUS       XP_041324649             215 aa            linear   VRT 06-MAY-2021
DEFINITION  FGFR1 oncogene partner 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324649
VERSION     XP_041324649.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468715.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="FGFR1 oncogene partner 2 isoform X2"
                     /calculated_mol_wt=24825
     Region          2..183
                     /region_name="SIKE"
                     /note="SIKE family; pfam05769"
                     /db_xref="CDD:461735"
     CDS             1..215
                     /gene="FGFR1OP2"
                     /coded_by="XM_041468715.1:184..831"
                     /db_xref="GeneID:121354264"
ORIGIN      
        1 mtctiekala dakalverlr ehdsaaeali kqttalnkrv eamkqyqeei qelnevarhr
       61 prstlvmgiq qenrqirelq qenkelrtsl eehqsaleli mskyreqmfr llmaskkddp
      121 siimklkeqh skelqvhvdq itemaavmrk aievderhsc keqeritqle qenkglreil
      181 qitresflnl kkddasests lsglvtssdl slrks
//
LOCUS       XP_041324650             144 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 21 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324650
VERSION     XP_041324650.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468716.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..144
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..144
                     /product="mediator of RNA polymerase II transcription
                     subunit 21"
                     /calculated_mol_wt=15507
     Region          3..127
                     /region_name="Med21"
                     /note="Subunit 21 of Mediator complex; pfam11221"
                     /db_xref="CDD:463241"
     CDS             1..144
                     /gene="MED21"
                     /coded_by="XM_041468716.1:114..548"
                     /db_xref="GeneID:121354265"
ORIGIN      
        1 madrltqlqd avnsladqfc naigvlqqcg ppasfsniqt ainkdqpvnp teeyaqlfaa
       61 liartakdid vlidslpsee staalqaacl yrleeenhea aarleevvyr gdvllekiqs
      121 aladiaqsql ktrsgthtqp lpds
//
LOCUS       XP_041324651            1511 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol 1,4,5-trisphosphate receptor type 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324651
VERSION     XP_041324651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468717.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522428.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1511
                     /product="inositol 1,4,5-trisphosphate receptor type 2"
                     /calculated_mol_wt=173024
     Region          5..263
                     /region_name="Ins145_P3_rec"
                     /note="Inositol 1,4,5-trisphosphate/ryanodine receptor;
                     pfam08709"
                     /db_xref="CDD:462572"
     Region          253..475
                     /region_name="beta-trefoil_MIR_ITPR2"
                     /note="MIR domain, beta-trefoil fold, found in inositol
                     1,4,5-trisphosphate receptor type 2 (ITPR2) and similar
                     proteins; cd23288"
                     /db_xref="CDD:467759"
     Site            order(280..281,422)
                     /site_type="other"
                     /note="putative homotetramer interface [polypeptide
                     binding]"
                     /db_xref="CDD:467759"
     Site            order(300,302..304,310)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:467759"
     Region          511..705
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     Region          1238..1380
                     /region_name="RYDR_ITPR"
                     /note="RIH domain; pfam01365"
                     /db_xref="CDD:460175"
     CDS             1..1511
                     /gene="ITPR2"
                     /coded_by="XM_041468717.1:37..4572"
                     /db_xref="GeneID:121354266"
ORIGIN      
        1 msekmssfly igdivslyae gsvngfistl glvddrcvvq peagdlanpp kkfrdclfkv
       61 cpmnrysaqk qywkakqakq gnhteaallk klqilfciky svdgathlyl knswpdivte
      121 clrlsenkha aeleqkqnes enrkllgeiv kysnviqllh iksnkyltvn krlpallekn
      181 amrvsldaag negswfyiqp fwklrsegdn vvvgdkvvlm pvnagqplha snielldnpg
      241 ckevnavncn tswkitlfmk fssyrddvlk ggdvvrlfha eqekfltcde yekkqhiflr
      301 ttlrqsatsa tsskalweie vvhhdpcrgg agqwnslfrf khlatgnyla aelnshypeg
      361 nnegkalqre gdlpaskkkr qagekimytl vsvphgndia slfeldattl qradclvprn
      421 syvrlrhlct ntwvtstsip idteeerpvm lkigtcqake dkeafaivsv plsevrdldf
      481 andankvlas tvkklengti tqnerrfvtk lledliffva dvpnngqevl dviitkpnre
      541 rqklmreqni laqifgilka pfkdkgegsm lrledlgdqr yapykymlrl cyrvlrhsqq
      601 dyrknqeyia knfcvmqsqi gydilaedti tallhnnrkl lekhitakei etfvnllrrn
      661 reprfldyls dlcvsnttai pvtqelickf mlspgnadil iqtklvstqm dnplecpvis
      721 ddideeevwl ywidsnkeph gkairhlaqe akegtkadle vltyyryqln lfarmcldrq
      781 ylainqisaq lsvdlilrcm sdeslpydlr asfcrlmlhm hvdrdpqesv vpvkyarlwt
      841 eiptkitihe ydsftdssrn emkikfaltm efveeylkev vnqpfpfgdk eknkltfevv
      901 hlarnliyfg fysfsellrl trtllaildi vqvpissyfe rlskfqdggn nvmrtihgvg
      961 emmtqmvlsr gsvfpistpd iqpsihpskq vstadsedvi vmdtklkiie ilqfilsvrl
     1021 dyrisymlsv ykrefgente nvdcstsspp dtpgtasaiv pdideiaaqa etmfagrkek
     1081 navqlddegg rtflrvlihl imhdypplls galhllfkhf sqraevlqaf kqvqllvsnq
     1141 dvdnykqika dldqlrltve kselwvekss nyesgevgnn qtkggeepme esnilspiqd
     1201 gtkkpqidsi ksnnynivke ilirlsklcv qskkcrnqqq rllknmgahl vvldllqipy
     1261 eksdekmnev mnlahtflqn fcrgnpqnqv llhknlnlfl tpglleaetm rhifmnnyll
     1321 cneisemvvq hfvhciethg rhveylrflq tivkadgkyv kkcqdmvmte linggedvli
     1381 fyndrasfpv llqmmcserd radesgplay hitlvellaa ctegknvyte ikcnsllpld
     1441 divrvvthdd cipevkiayv nfvnhcyvdt evemkeiyas nhiwklfenf lvdmarqrta
     1501 glrfqwiwta r
//
LOCUS       XP_041324652              59 aa            linear   VRT 06-MAY-2021
DEFINITION  cortexin domain-containing 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324652
VERSION     XP_041324652.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468718.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..59
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..59
                     /product="cortexin domain-containing 1"
                     /calculated_mol_wt=6587
     Region          1..>54
                     /region_name="Cortexin"
                     /note="Cortexin of kidney; pfam11057"
                     /db_xref="CDD:314086"
     CDS             1..59
                     /gene="CTXND1"
                     /coded_by="XM_041468718.1:1..180"
                     /db_xref="GeneID:121354267"
ORIGIN      
        1 mevptpepvy vdvdkgltla cfvflclfli vmiircakvi mdpysaipts tweeqhldd
//
LOCUS       XP_041324653             475 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardial zonula adherens protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324653
VERSION     XP_041324653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="myocardial zonula adherens protein isoform X1"
                     /calculated_mol_wt=55582
     Region          191..>424
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..475
                     /gene="LOC121354270"
                     /coded_by="XM_041468719.1:218..1645"
                     /db_xref="GeneID:121354270"
ORIGIN      
        1 mlryssgltv tattprrppd dggrsrrkmn vcrlrltvpp devsqpeqgp keterkksel
       61 yhvpngmspg klshgmvygv vhrtdnnhkr emvvygwsad qlkeemnyik evratlekvr
      121 kkmygeydem krkiqqltne lkvtnahqes lenhvrvqaa aldsfsemns sltsasidlq
      181 ktlvdvtlen tdireqirnl khtheqsmek lrekqkqlet aqienqllkl kvessqeana
      241 evmremtrkl ysqyeekmre eeqkhkaeke mlleetnqll kaieeankkm qvtetsiqek
      301 dqrigeldrl iermeeerhq lqkqlelnel qisgaksenn sdsersqhle evaaslreri
      361 khlddmvhcq qkkvkhmvee iemlrkkvke kelfiiqlld kisflecenk elqdkldylm
      421 enqqktniet rdtgvecdlp ystssenrpp esprpvrtyt pfkrvlefst rssts
//
LOCUS       XP_041324654             793 aa            linear   VRT 06-MAY-2021
DEFINITION  myocardial zonula adherens protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324654
VERSION     XP_041324654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..793
                     /product="myocardial zonula adherens protein isoform X2"
                     /calculated_mol_wt=90898
     Region          191..>505
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          442..662
                     /region_name="GCOM2"
                     /note="Putative GRINL1B complex locus protein 2;
                     pfam15328"
                     /db_xref="CDD:464649"
     CDS             1..793
                     /gene="LOC121354270"
                     /coded_by="XM_041468720.1:92..2473"
                     /db_xref="GeneID:121354270"
ORIGIN      
        1 mlryssgltv tattprrppd dggrsrrkmn vcrlrltvpp devsqpeqgp keterkksel
       61 yhvpngmspg klshgmvygv vhrtdnnhkr emvvygwsad qlkeemnyik evratlekvr
      121 kkmygeydem krkiqqltne lkvtnahqes lenhvrvqaa aldsfsemns sltsasidlq
      181 ktlvdvtlen tdireqirnl khtheqsmek lrekqkqlet aqienqllkl kvessqeana
      241 evmremtrkl ysqyeekmre eeqkhkaeke mlleetnqll kaieeankkm qvtetsiqek
      301 dqrigeldrl iermeeerhq lqkqlelnel qisgaksenn sdsersqhle evaaslreri
      361 khlddmvhcq qkkvkhmvee iemlrkkvke kelfiiqlld kisflecenk elqdkldylm
      421 enqqktniet rdtgvecdlp yrkfiarlpd kgkkisdfve klklaifqee evartaells
      481 avrlefqakq eeintskqea vltedtvdsa dssvinensn ikdisdtsae rqeaecveed
      541 atnpalenhs iqrknhkakt vakdlnhfce dvsksassnh lnndqqvsqs steggtesta
      601 aldnskealv dafqrvtiad gessekilek eqdvakhkgn vfgrqhpktp hyievleara
      661 knpvikkpkf ktnalsgeqs gsshgssssr spggfgspvp peerrlrdkk hldditaarl
      721 pplhhspakl lsieesiaiq iqqkeayeem qaklaaqkla erlnikmlrf epegeasmqy
      781 revrdedyfs aed
//
LOCUS       XP_041324656            1363 aa            linear   VRT 06-MAY-2021
DEFINITION  insulin-like growth factor 1 receptor isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324656
VERSION     XP_041324656.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468722.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1363
                     /product="insulin-like growth factor 1 receptor isoform
                     X1"
                     /calculated_mol_wt=153943
     Region          51..161
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          175..330
                     /region_name="Furin-like"
                     /note="Furin-like cysteine rich region; pfam00757"
                     /db_xref="CDD:395614"
     Region          351..464
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          495..605
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(594..595,597..598)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          610..>653
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          835..924
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(913..914,916..917)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          993..1269
                     /region_name="PTKc_InsR_like"
                     /note="Catalytic domain of Insulin Receptor-like Protein
                     Tyrosine Kinases; cd05032"
                     /db_xref="CDD:173625"
     Site            order(1006,1008..1010,1014,1032,1034,1081,1083,1087,1136,
                     1140..1141,1143,1154,1171..1173,1175..1176,1185,1187,1219)
                     /site_type="active"
                     /db_xref="CDD:173625"
     Site            order(1006,1008..1010,1014,1032,1034,1081,1083,1087,1141,
                     1143,1154)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:173625"
     Site            order(1136,1140,1171..1173,1175..1176,1185,1187,1219)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:173625"
     Site            1153..1178
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:173625"
     CDS             1..1363
                     /gene="IGF1R"
                     /coded_by="XM_041468722.1:223..4314"
                     /db_xref="GeneID:121354271"
ORIGIN      
        1 mksgagggsl avvwgfllvf aalclwptng eicgpnvdir ndihelkrle nctviegflq
       61 illiskaedy rnfrfpkltv itdylllfrv agleslsdlf pnltvirgrn lfynyalvif
      121 emtnlkeigl hnlrnitrga irieknsdlc ylstvdwsli ldavsnnyiv gnkppkecgd
      181 lcpgtmeekp lcektsinne ynyrcwttnh cqkmcpsscg kractdqnec chpeclgsct
      241 apdnntacva crnyyyegvc lptcppntyk fegwrcvtre fcskvpatda seyekfvihn
      301 decmaecpsg firngsqsmf cspcegpcpk icedgktkti dsvtsaqmlq gctilkgnll
      361 inirrgnnia selenfmgli etvtgyvkir hshalvslsf lknlryilge eqvdgnysfy
      421 vldnhnlqql wdwnhhnlti segkmyfafn pklcvseiyr meevsgtkgr qskgdinprn
      481 ngerascesk ilhfvsnttl knrikltwer yrppdyrdli sftvyykeap fknvteydgq
      541 dacgsnswnm vdvdlppnke nnpgillqgl kpwtqyaiyv kavtltmmen hhihgaksei
      601 iyirtnaavp sipldvisas nsssqlivkw nppslpngnl syyivrwqqq pqdsylyrhn
      661 ycskdkvpir ryadgtidte eateptkpeg cggekgpcca cpkteaekqa ekeeaeyrkv
      721 fenflhnsif vprpdrkrrd vfrianatla trsrnatgte hftnasdtee seveypffet
      781 kvdgkertvi shlqpftlyr idihscnhea dtlgcsasnf vfartmpseg adnipgtvsw
      841 eakeentvyl kwlepanpng lilmyeikyg qhgeekrecv srqeykklgg aklthlnpgn
      901 ysarvqatsl agngswtepi sfyvqpksan ygnflhlviv lpialllilg gllimlyvfn
      961 kkrnsdrlgn gvlyasvnpe yfsasdvyvp dewevpreki tmcrelgqgs fgmvyegiak
     1021 gvvkdepetr vaiktvnesa smreriefln easvmkefnc hhvvrllgvv sqgqptlvim
     1081 elmtrgdlks ylrslrpdte nnpgqapptl kkmiqmagei adgmaylnan kfvhrdlaar
     1141 ncmvaedftv kigdfgmtrd iyetdyyrkg gkgllpvrwm speslkdgvf tthsdvwsfg
     1201 vvlweiatla eqpyqgmtne qvlrfvmegg llekpdncpd mlfelmrmcw qynpkmrpsf
     1261 leiigsikde ldpafkevsf fyseenkppd teeldleten mesipldpss tlqptdkhsg
     1321 hkaengpgvv vlrasfeerq pyahmnggrk neralplpqs sac
//
LOCUS       XP_041324657            1362 aa            linear   VRT 06-MAY-2021
DEFINITION  insulin-like growth factor 1 receptor isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324657
VERSION     XP_041324657.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468723.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1362
                     /product="insulin-like growth factor 1 receptor isoform
                     X2"
                     /calculated_mol_wt=153872
     Region          51..161
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          175..330
                     /region_name="Furin-like"
                     /note="Furin-like cysteine rich region; pfam00757"
                     /db_xref="CDD:395614"
     Region          351..464
                     /region_name="Recep_L_domain"
                     /note="Receptor L domain; pfam01030"
                     /db_xref="CDD:460032"
     Region          495..605
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(594..595,597..598)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          610..>653
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          835..924
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(913..914,916..917)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          992..1279
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(1005..1008,1011,1013,1031,1033,1063,1079..1082,1135,
                     1139..1140,1142,1152..1153)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:133192"
     CDS             1..1362
                     /gene="IGF1R"
                     /coded_by="XM_041468723.1:223..4311"
                     /db_xref="GeneID:121354271"
ORIGIN      
        1 mksgagggsl avvwgfllvf aalclwptng eicgpnvdir ndihelkrle nctviegflq
       61 illiskaedy rnfrfpkltv itdylllfrv agleslsdlf pnltvirgrn lfynyalvif
      121 emtnlkeigl hnlrnitrga irieknsdlc ylstvdwsli ldavsnnyiv gnkppkecgd
      181 lcpgtmeekp lcektsinne ynyrcwttnh cqkmcpsscg kractdqnec chpeclgsct
      241 apdnntacva crnyyyegvc lptcppntyk fegwrcvtre fcskvpatda seyekfvihn
      301 decmaecpsg firngsqsmf cspcegpcpk icedgktkti dsvtsaqmlq gctilkgnll
      361 inirrgnnia selenfmgli etvtgyvkir hshalvslsf lknlryilge eqvdgnysfy
      421 vldnhnlqql wdwnhhnlti segkmyfafn pklcvseiyr meevsgtkgr qskgdinprn
      481 ngerascesk ilhfvsnttl knrikltwer yrppdyrdli sftvyykeap fknvteydgq
      541 dacgsnswnm vdvdlppnke nnpgillqgl kpwtqyaiyv kavtltmmen hhihgaksei
      601 iyirtnaavp sipldvisas nsssqlivkw nppslpngnl syyivrwqqq pqdsylyrhn
      661 ycskdkvpir ryadgtidte eateptkpeg cggekgpcca cpkteaekqa ekeeaeyrkv
      721 fenflhnsif vprpdrkrrd vfrianatla trsrnatgte hftnasdtee seveypffet
      781 kvdgkertvi shlqpftlyr idihscnhea dtlgcsasnf vfartmpseg adnipgtvsw
      841 eakeentvyl kwlepanpng lilmyeikyg qhgeekrecv srqeykklgg aklthlnpgn
      901 ysarvqatsl agngswtepi sfyvqpksny gnflhlvivl pialllilgg llimlyvfnk
      961 krnsdrlgng vlyasvnpey fsasdvyvpd ewevprekit mcrelgqgsf gmvyegiakg
     1021 vvkdepetrv aiktvnesas mrerieflne asvmkefnch hvvrllgvvs qgqptlvime
     1081 lmtrgdlksy lrslrpdten npgqapptlk kmiqmageia dgmaylnank fvhrdlaarn
     1141 cmvaedftvk igdfgmtrdi yetdyyrkgg kgllpvrwms peslkdgvft thsdvwsfgv
     1201 vlweiatlae qpyqgmtneq vlrfvmeggl lekpdncpdm lfelmrmcwq ynpkmrpsfl
     1261 eiigsikdel dpafkevsff yseenkppdt eeldletenm esipldpsst lqptdkhsgh
     1321 kaengpgvvv lrasfeerqp yahmnggrkn eralplpqss ac
//
LOCUS       XP_041324658             376 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354272 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324658
VERSION     XP_041324658.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468724.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..376
                     /product="uncharacterized protein LOC121354272 isoform X1"
                     /calculated_mol_wt=41155
     CDS             1..376
                     /gene="LOC121354272"
                     /coded_by="XM_041468724.1:7..1137"
                     /db_xref="GeneID:121354272"
ORIGIN      
        1 meapgrrclr gggagsgrra ggaavspqrw lrwyivhrsr kheahrgwqs asstsifkhr
       61 thahtqrhkn wegrggrgrg garprqsyyk tttappspra gtglprrdpr gsaprsagev
      121 ggdtprtttt hnntaaatts paacrgskcr iwvenelkrl ppyssssspr rgchklllkk
      181 ekkkkrkkkk kkrkksriqd thtkqqqrqq qqqqrgersa qhpassprss plrippsrla
      241 iaagaggrrt tttttttktt qricksfsff fffffpflpf llfslllwvr arcepspgaa
      301 qpkaggggsg rgvgvwvcvc vcvcvcvseq gglrgarkai rfaegqtpga ccegsslvsl
      361 ndighpgpkw wghrls
//
LOCUS       XP_041324659             284 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354272 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324659
VERSION     XP_041324659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="uncharacterized protein LOC121354272 isoform X2"
                     /calculated_mol_wt=31200
     CDS             1..284
                     /gene="LOC121354272"
                     /coded_by="XM_041468725.1:7..861"
                     /db_xref="GeneID:121354272"
ORIGIN      
        1 meapgrrclr gggagsgrra ggaavspqrw lrwyivhrsr kheahrgwqs asstsifkhr
       61 thahtqrhkn wegrggrgrg garprqsyyk tttappspra gtglprrdpr gsaprsagev
      121 ggdtprtttt hnntaaatts paacrgskcr iwvenelkrl ppyssssspr rgchklllkk
      181 ekkkkrkkkk kkrkksriqd thtkqqqrqq qqqqrgersa qhpassprss plrippsrla
      241 iaagaggrrt tttttttktt qrislhsyps mtldtqapng gdtg
//
LOCUS       XP_041324660            1771 aa            linear   VRT 06-MAY-2021
DEFINITION  tight junction protein ZO-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324660
VERSION     XP_041324660.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468726.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1771
                     /product="tight junction protein ZO-1 isoform X1"
                     /calculated_mol_wt=198067
     Region          24..110
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(35..41,59,62,90,94,97..98)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          189..266
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(189..194,199..215,218..220,223,225..226,233,
                     241..242,244..245,257..263)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(200..206,212,215,245,249,252..253)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          423..502
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(433..439,449,452,481,485,488..489)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          518..582
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(518..520,548..550,555,558,577)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(520..526,539..540,543,558,566..567,575..577,
                     581..582)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(526,528,531,535,556..557,576,578..579)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          616..795
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <1134..1487
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1639..1737
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     CDS             1..1771
                     /gene="TJP1"
                     /coded_by="XM_041468726.1:127..5442"
                     /db_xref="GeneID:121354273"
ORIGIN      
        1 msaraaaast ksttmeetai weqhtvtlhr apgfgfgiai sggrdnphfq sgetsivisd
       61 vlkggpaegl lqendrvamv ngvsmdnveh afavqqlrks gknakitirr mkkiqipvtr
      121 pdpepvsene ddsydeeird prssrggpsa srrhekswvr drsasrersl sprsdrrsvt
      181 ssqpakptkv tlvksrknee yglrlashif vkeisqdsla ardgniqegd vvlkingtvt
      241 enmsladakt lierskgklk mvvqrderat llnvpdlsds ihsanaserd diseiqslas
      301 dhsnrshdrp rrsrsrspdq rsepsdhsrh spqqpsngsh rsrederitk pgavstpvkn
      361 addiskavee vtvertekqt pplpepkpvy aqggqpdvdl pvspsdgplp nsthedgmlr
      421 psmklvkfrk gdsvglrlag gndvgifvag vledspaake gleegdqilr vnnvdftnii
      481 reeavlflld lpkgeevtil aqkkkdvyrr ivesdvgdsf yirthfeyek espyglsfnk
      541 gevfrvvdtl yngklgswla irigknhkev ergiipnknr aeqlasvqyt lpktaggdra
      601 dfwrfrglrs skrnlrksre dlsaqpvqtk fpayervvlr eagflrpvti fgpiadvare
      661 klareepdif qiakseprda gtdqrssgii rlhtikqiid rdkhalldvt pnavdrlnya
      721 qwypivvfln pdskqgvktm rmrlcpesrk sarklyerah klrknnhhlf tttinlnsmn
      781 egwygalkea iqqqqnqlvw vsegkadgat sddldlhddr lsylsapgse ysmystdsrh
      841 tsdyedtdte ggaytdqeld etlndevgtp pesaitrsse pvredssgmh hetqtypaya
      901 sqaqpqpnlr idssgfkatt tqpkaeaspa vpylspspes npatssasav nanvnltnvr
      961 leepsaapyn syqpqagplr tpstegahvv lrdqepssls phidpakvyr kdpyineeas
     1021 rqsyvlkqpa inhpvqrqer dpnliyesqa qyaekqpsrd yeqstyryds tnyvdqfsrg
     1081 ydprlhyddr vppyeehwty yeekqpynqt rtayenqppr dldsrqnlee stersyypaq
     1141 prfeeppams ydsrpryeha pknfslpqvr yedqhavgyd thgrykaeaq pyqsaisrsp
     1201 epkqyfdphi rgyeqgppqa ynakagqyep shstsgvslp pppssqtkpe vlpsnskplp
     1261 tppslaeeee dpamkpqsvr srvkiferrr spslekmkdt sdtstvkppe lapkpaltsv
     1321 sgpkptsqsq yehekttyra pepqrpqvkp pedivrsnhy dpeedeeyyr kqlsyfdrrs
     1381 fenkpsaqvp ashhseptkp ihsqnqlnfs nyskgkptdt epmdrpvgek ryepipqvtt
     1441 pppapsvqyt qpqsinspvl slpahhkpal sevnsvsdpp ppqnksaifr ssredtvqst
     1501 fypqksfpdk gpvngteqiq ktvtpsynrf stkpytsaar pferkfespk fnhnllpnea
     1561 qhkpelpsks snspqpilka hsssqppdfe sgmdtyavqv dkpkyqpnnv navpkaipvs
     1621 ptaledeeee dghtvvatar gvfnsnggvl ssietgvsii ipqgaipegi eqeiyfkvcr
     1681 dnsilppldk ekgetllspl vmcgphglkf lkpvelrlph casmtpdgws falkssdsss
     1741 gdpktwqnks lpgdpnylvg ancvsvlidh f
//
LOCUS       XP_041324661            1758 aa            linear   VRT 06-MAY-2021
DEFINITION  tight junction protein ZO-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324661
VERSION     XP_041324661.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468727.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1758
                     /product="tight junction protein ZO-1 isoform X2"
                     /calculated_mol_wt=196727
     Region          24..110
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(35..41,59,62,90,94,97..98)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          189..266
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(189..194,199..215,218..220,223,225..226,233,
                     241..242,244..245,257..263)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(200..206,212,215,245,249,252..253)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          423..502
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(433..439,449,452,481,485,488..489)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          518..582
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(518..520,548..550,555,558,577)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(520..526,539..540,543,558,566..567,575..577,
                     581..582)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(526,528,531,535,556..557,576,578..579)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          616..795
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <1134..1487
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1639..1727
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     CDS             1..1758
                     /gene="TJP1"
                     /coded_by="XM_041468727.1:127..5403"
                     /db_xref="GeneID:121354273"
ORIGIN      
        1 msaraaaast ksttmeetai weqhtvtlhr apgfgfgiai sggrdnphfq sgetsivisd
       61 vlkggpaegl lqendrvamv ngvsmdnveh afavqqlrks gknakitirr mkkiqipvtr
      121 pdpepvsene ddsydeeird prssrggpsa srrhekswvr drsasrersl sprsdrrsvt
      181 ssqpakptkv tlvksrknee yglrlashif vkeisqdsla ardgniqegd vvlkingtvt
      241 enmsladakt lierskgklk mvvqrderat llnvpdlsds ihsanaserd diseiqslas
      301 dhsnrshdrp rrsrsrspdq rsepsdhsrh spqqpsngsh rsrederitk pgavstpvkn
      361 addiskavee vtvertekqt pplpepkpvy aqggqpdvdl pvspsdgplp nsthedgmlr
      421 psmklvkfrk gdsvglrlag gndvgifvag vledspaake gleegdqilr vnnvdftnii
      481 reeavlflld lpkgeevtil aqkkkdvyrr ivesdvgdsf yirthfeyek espyglsfnk
      541 gevfrvvdtl yngklgswla irigknhkev ergiipnknr aeqlasvqyt lpktaggdra
      601 dfwrfrglrs skrnlrksre dlsaqpvqtk fpayervvlr eagflrpvti fgpiadvare
      661 klareepdif qiakseprda gtdqrssgii rlhtikqiid rdkhalldvt pnavdrlnya
      721 qwypivvfln pdskqgvktm rmrlcpesrk sarklyerah klrknnhhlf tttinlnsmn
      781 egwygalkea iqqqqnqlvw vsegkadgat sddldlhddr lsylsapgse ysmystdsrh
      841 tsdyedtdte ggaytdqeld etlndevgtp pesaitrsse pvredssgmh hetqtypaya
      901 sqaqpqpnlr idssgfkatt tqpkaeaspa vpylspspes npatssasav nanvnltnvr
      961 leepsaapyn syqpqagplr tpstegahvv lrdqepssls phidpakvyr kdpyineeas
     1021 rqsyvlkqpa inhpvqrqer dpnliyesqa qyaekqpsrd yeqstyryds tnyvdqfsrg
     1081 ydprlhyddr vppyeehwty yeekqpynqt rtayenqppr dldsrqnlee stersyypaq
     1141 prfeeppams ydsrpryeha pknfslpqvr yedqhavgyd thgrykaeaq pyqsaisrsp
     1201 epkqyfdphi rgyeqgppqa ynakagqyep shstsgvslp pppssqtkpe vlpsnskplp
     1261 tppslaeeee dpamkpqsvr srvkiferrr spslekmkdt sdtstvkppe lapkpaltsv
     1321 sgpkptsqsq yehekttyra pepqrpqvkp pedivrsnhy dpeedeeyyr kqlsyfdrrs
     1381 fenkpsaqvp ashhseptkp ihsqnqlnfs nyskgkptdt epmdrpvgek ryepipqvtt
     1441 pppapsvqyt qpqsinspvl slpahhkpal sevnsvsdpp ppqnksaifr ssredtvqst
     1501 fypqksfpdk gpvngteqiq ktvtpsynrf stkpytsaar pferkfespk fnhnllpnea
     1561 qhkpelpsks snspqpilka hsssqppdfe sgmdtyavqv dkpkyqpnnv navpkaipvs
     1621 ptaledeeee dghtvvatar gvfnsnggvl ssietgvsii ipqgaipegi eqeiyfkvcr
     1681 dnsilppldk ekgetllspl vmcgphglkf lkpvelrlph casmtpdgdp ktwqnkslpg
     1741 dpnylvganc vsvlidhf
//
LOCUS       XP_041324662            1751 aa            linear   VRT 06-MAY-2021
DEFINITION  tight junction protein ZO-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324662
VERSION     XP_041324662.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468728.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1751
                     /product="tight junction protein ZO-1 isoform X3"
                     /calculated_mol_wt=196067
     Region          24..110
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(35..41,59,62,90,94,97..98)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          189..266
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(189..194,199..215,218..220,223,225..226,233,
                     241..242,244..245,257..263)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(200..206,212,215,245,249,252..253)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          423..502
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(433..439,449,452,481,485,488..489)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          518..582
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(518..520,548..550,555,558,577)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(520..526,539..540,543,558,566..567,575..577,
                     581..582)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(526,528,531,535,556..557,576,578..579)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          616..795
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <1134..1487
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1635..1741
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     CDS             1..1751
                     /gene="TJP1"
                     /coded_by="XM_041468728.1:127..5382"
                     /db_xref="GeneID:121354273"
ORIGIN      
        1 msaraaaast ksttmeetai weqhtvtlhr apgfgfgiai sggrdnphfq sgetsivisd
       61 vlkggpaegl lqendrvamv ngvsmdnveh afavqqlrks gknakitirr mkkiqipvtr
      121 pdpepvsene ddsydeeird prssrggpsa srrhekswvr drsasrersl sprsdrrsvt
      181 ssqpakptkv tlvksrknee yglrlashif vkeisqdsla ardgniqegd vvlkingtvt
      241 enmsladakt lierskgklk mvvqrderat llnvpdlsds ihsanaserd diseiqslas
      301 dhsnrshdrp rrsrsrspdq rsepsdhsrh spqqpsngsh rsrederitk pgavstpvkn
      361 addiskavee vtvertekqt pplpepkpvy aqggqpdvdl pvspsdgplp nsthedgmlr
      421 psmklvkfrk gdsvglrlag gndvgifvag vledspaake gleegdqilr vnnvdftnii
      481 reeavlflld lpkgeevtil aqkkkdvyrr ivesdvgdsf yirthfeyek espyglsfnk
      541 gevfrvvdtl yngklgswla irigknhkev ergiipnknr aeqlasvqyt lpktaggdra
      601 dfwrfrglrs skrnlrksre dlsaqpvqtk fpayervvlr eagflrpvti fgpiadvare
      661 klareepdif qiakseprda gtdqrssgii rlhtikqiid rdkhalldvt pnavdrlnya
      721 qwypivvfln pdskqgvktm rmrlcpesrk sarklyerah klrknnhhlf tttinlnsmn
      781 egwygalkea iqqqqnqlvw vsegkadgat sddldlhddr lsylsapgse ysmystdsrh
      841 tsdyedtdte ggaytdqeld etlndevgtp pesaitrsse pvredssgmh hetqtypaya
      901 sqaqpqpnlr idssgfkatt tqpkaeaspa vpylspspes npatssasav nanvnltnvr
      961 leepsaapyn syqpqagplr tpstegahvv lrdqepssls phidpakvyr kdpyineeas
     1021 rqsyvlkqpa inhpvqrqer dpnliyesqa qyaekqpsrd yeqstyryds tnyvdqfsrg
     1081 ydprlhyddr vppyeehwty yeekqpynqt rtayenqppr dldsrqnlee stersyypaq
     1141 prfeeppams ydsrpryeha pknfslpqvr yedqhavgyd thgrykaeaq pyqsaisrsp
     1201 epkqyfdphi rgyeqgppqa ynakagqyep shstsgvslp pppssqtkpe vlpsnskplp
     1261 tppslaeeee dpamkpqsvr srvkiferrr spslekmkdt sdtstvkppe lapkpaltsv
     1321 sgpkptsqsq yehekttyra pepqrpqvkp pedivrsnhy dpeedeeyyr kqlsyfdrrs
     1381 fenkpsaqvp ashhseptkp ihsqnqlnfs nyskgkptdt epmdrpvgek ryepipqvtt
     1441 pppapsvqyt qpqsinspvl slpahhkpal sevnsvsdpp ppqnksaifr ssredtvqst
     1501 fypqksfpdk gpvngteqiq ktvtpsynrf stkpytsaar pferkfespk fnhnllpnea
     1561 qhkpelpsks snspqpilka hsssqppdfe sgmdtyavqv dkpkyqpnnv navpkaipvs
     1621 ptaledeeee dghtvvatar gvfnsnggvl ssietgvsii ipqgaipegi eqeiyfkvcr
     1681 dnsilppldk ekgetllspl vmcgphglkf lkpvelrlph cdpktwqnks lpgdpnylvg
     1741 ancvsvlidh f
//
LOCUS       XP_041324663            1687 aa            linear   VRT 06-MAY-2021
DEFINITION  tight junction protein ZO-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324663
VERSION     XP_041324663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1687
                     /product="tight junction protein ZO-1 isoform X4"
                     /calculated_mol_wt=189352
     Region          24..110
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(35..41,59,62,90,94,97..98)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          189..266
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(189..194,199..215,218..220,223,225..226,233,
                     241..242,244..245,257..263)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(200..206,212,215,245,249,252..253)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          423..502
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(433..439,449,452,481,485,488..489)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          518..582
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(518..520,548..550,555,558,577)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(520..526,539..540,543,558,566..567,575..577,
                     581..582)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(526,528,531,535,556..557,576,578..579)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          616..795
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <1050..1403
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1555..1653
                     /region_name="ZU5"
                     /note="ZU5 domain; pfam00791"
                     /db_xref="CDD:459941"
     CDS             1..1687
                     /gene="TJP1"
                     /coded_by="XM_041468729.1:127..5190"
                     /db_xref="GeneID:121354273"
ORIGIN      
        1 msaraaaast ksttmeetai weqhtvtlhr apgfgfgiai sggrdnphfq sgetsivisd
       61 vlkggpaegl lqendrvamv ngvsmdnveh afavqqlrks gknakitirr mkkiqipvtr
      121 pdpepvsene ddsydeeird prssrggpsa srrhekswvr drsasrersl sprsdrrsvt
      181 ssqpakptkv tlvksrknee yglrlashif vkeisqdsla ardgniqegd vvlkingtvt
      241 enmsladakt lierskgklk mvvqrderat llnvpdlsds ihsanaserd diseiqslas
      301 dhsnrshdrp rrsrsrspdq rsepsdhsrh spqqpsngsh rsrederitk pgavstpvkn
      361 addiskavee vtvertekqt pplpepkpvy aqggqpdvdl pvspsdgplp nsthedgmlr
      421 psmklvkfrk gdsvglrlag gndvgifvag vledspaake gleegdqilr vnnvdftnii
      481 reeavlflld lpkgeevtil aqkkkdvyrr ivesdvgdsf yirthfeyek espyglsfnk
      541 gevfrvvdtl yngklgswla irigknhkev ergiipnknr aeqlasvqyt lpktaggdra
      601 dfwrfrglrs skrnlrksre dlsaqpvqtk fpayervvlr eagflrpvti fgpiadvare
      661 klareepdif qiakseprda gtdqrssgii rlhtikqiid rdkhalldvt pnavdrlnya
      721 qwypivvfln pdskqgvktm rmrlcpesrk sarklyerah klrknnhhlf tttinlnsmn
      781 egwygalkea iqqqqnqlvw vsegkadgat sddldlhddr lsylsapgse ysmystdsrh
      841 tsdyedtdte ggaytdqeld etlndevgtp pesaitrsse pvredssgmh hetqtypaya
      901 sqaqpqpnlr idssgfkatt tqpvyrkdpy ineeasrqsy vlkqpainhp vqrqerdpnl
      961 iyesqaqyae kqpsrdyeqs tyrydstnyv dqfsrgydpr lhyddrvppy eehwtyyeek
     1021 qpynqtrtay enqpprdlds rqnleester syypaqprfe eppamsydsr pryehapknf
     1081 slpqvryedq havgydthgr ykaeaqpyqs aisrspepkq yfdphirgye qgppqaynak
     1141 agqyepshst sgvslpppps sqtkpevlps nskplptpps laeeeedpam kpqsvrsrvk
     1201 iferrrspsl ekmkdtsdts tvkppelapk paltsvsgpk ptsqsqyehe kttyrapepq
     1261 rpqvkppedi vrsnhydpee deeyyrkqls yfdrrsfenk psaqvpashh septkpihsq
     1321 nqlnfsnysk gkptdtepmd rpvgekryep ipqvttpppa psvqytqpqs inspvlslpa
     1381 hhkpalsevn svsdppppqn ksaifrssre dtvqstfypq ksfpdkgpvn gteqiqktvt
     1441 psynrfstkp ytsaarpfer kfespkfnhn llpneaqhkp elpskssnsp qpilkahsss
     1501 qppdfesgmd tyavqvdkpk yqpnnvnavp kaipvsptal edeeeedght vvatargvfn
     1561 snggvlssie tgvsiiipqg aipegieqei yfkvcrdnsi lppldkekge tllsplvmcg
     1621 phglkflkpv elrlphcasm tpdgwsfalk ssdsssgdpk twqnkslpgd pnylvgancv
     1681 svlidhf
//
LOCUS       XP_041324664            1667 aa            linear   VRT 06-MAY-2021
DEFINITION  tight junction protein ZO-1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324664
VERSION     XP_041324664.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468730.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1667
                     /product="tight junction protein ZO-1 isoform X5"
                     /calculated_mol_wt=187352
     Region          24..110
                     /region_name="PDZ1_ZO1-like"
                     /note="PDZ domain 1 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06727"
                     /db_xref="CDD:467209"
     Site            order(35..41,59,62,90,94,97..98)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467209"
     Region          189..266
                     /region_name="PDZ2_ZO1-like_ds"
                     /note="PDZ domain 2 of Zonula Occludens-1 (ZO-1), ZO-2 and
                     ZO-3, and related domains; form domain-swapping dimers;
                     cd06728"
                     /db_xref="CDD:467210"
     Site            order(189..194,199..215,218..220,223,225..226,233,
                     241..242,244..245,257..263)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467210"
     Site            order(200..206,212,215,245,249,252..253)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467210"
     Region          423..502
                     /region_name="PDZ3_ZO1-like_domain"
                     /note="PDZ domain 3 of Zonula Occludens-1 (ZO-1), homologs
                     ZO-2 and ZO-3, and related domains; cd06729"
                     /db_xref="CDD:467211"
     Site            order(433..439,449,452,481,485,488..489)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467211"
     Region          518..582
                     /region_name="SH3_ZO-1"
                     /note="Src homology 3 domain of the Tight junction
                     protein, Zonula occludens protein 1; cd12026"
                     /db_xref="CDD:212959"
     Site            order(518..520,548..550,555,558,577)
                     /site_type="other"
                     /note="PDZ interface"
                     /db_xref="CDD:212959"
     Site            order(520..526,539..540,543,558,566..567,575..577,
                     581..582)
                     /site_type="other"
                     /note="GuK interface [polypeptide binding]"
                     /db_xref="CDD:212959"
     Site            order(526,528,531,535,556..557,576,578..579)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212959"
     Region          616..795
                     /region_name="GuKc"
                     /note="Guanylate kinase homologues; smart00072"
                     /db_xref="CDD:214504"
     Region          <1050..1403
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1551..1657
                     /region_name="ZU5"
                     /note="Domain present in ZO-1 and Unc5-like netrin
                     receptors; smart00218"
                     /db_xref="CDD:128514"
     CDS             1..1667
                     /gene="TJP1"
                     /coded_by="XM_041468730.1:127..5130"
                     /db_xref="GeneID:121354273"
ORIGIN      
        1 msaraaaast ksttmeetai weqhtvtlhr apgfgfgiai sggrdnphfq sgetsivisd
       61 vlkggpaegl lqendrvamv ngvsmdnveh afavqqlrks gknakitirr mkkiqipvtr
      121 pdpepvsene ddsydeeird prssrggpsa srrhekswvr drsasrersl sprsdrrsvt
      181 ssqpakptkv tlvksrknee yglrlashif vkeisqdsla ardgniqegd vvlkingtvt
      241 enmsladakt lierskgklk mvvqrderat llnvpdlsds ihsanaserd diseiqslas
      301 dhsnrshdrp rrsrsrspdq rsepsdhsrh spqqpsngsh rsrederitk pgavstpvkn
      361 addiskavee vtvertekqt pplpepkpvy aqggqpdvdl pvspsdgplp nsthedgmlr
      421 psmklvkfrk gdsvglrlag gndvgifvag vledspaake gleegdqilr vnnvdftnii
      481 reeavlflld lpkgeevtil aqkkkdvyrr ivesdvgdsf yirthfeyek espyglsfnk
      541 gevfrvvdtl yngklgswla irigknhkev ergiipnknr aeqlasvqyt lpktaggdra
      601 dfwrfrglrs skrnlrksre dlsaqpvqtk fpayervvlr eagflrpvti fgpiadvare
      661 klareepdif qiakseprda gtdqrssgii rlhtikqiid rdkhalldvt pnavdrlnya
      721 qwypivvfln pdskqgvktm rmrlcpesrk sarklyerah klrknnhhlf tttinlnsmn
      781 egwygalkea iqqqqnqlvw vsegkadgat sddldlhddr lsylsapgse ysmystdsrh
      841 tsdyedtdte ggaytdqeld etlndevgtp pesaitrsse pvredssgmh hetqtypaya
      901 sqaqpqpnlr idssgfkatt tqpvyrkdpy ineeasrqsy vlkqpainhp vqrqerdpnl
      961 iyesqaqyae kqpsrdyeqs tyrydstnyv dqfsrgydpr lhyddrvppy eehwtyyeek
     1021 qpynqtrtay enqpprdlds rqnleester syypaqprfe eppamsydsr pryehapknf
     1081 slpqvryedq havgydthgr ykaeaqpyqs aisrspepkq yfdphirgye qgppqaynak
     1141 agqyepshst sgvslpppps sqtkpevlps nskplptpps laeeeedpam kpqsvrsrvk
     1201 iferrrspsl ekmkdtsdts tvkppelapk paltsvsgpk ptsqsqyehe kttyrapepq
     1261 rpqvkppedi vrsnhydpee deeyyrkqls yfdrrsfenk psaqvpashh septkpihsq
     1321 nqlnfsnysk gkptdtepmd rpvgekryep ipqvttpppa psvqytqpqs inspvlslpa
     1381 hhkpalsevn svsdppppqn ksaifrssre dtvqstfypq ksfpdkgpvn gteqiqktvt
     1441 psynrfstkp ytsaarpfer kfespkfnhn llpneaqhkp elpskssnsp qpilkahsss
     1501 qppdfesgmd tyavqvdkpk yqpnnvnavp kaipvsptal edeeeedght vvatargvfn
     1561 snggvlssie tgvsiiipqg aipegieqei yfkvcrdnsi lppldkekge tllsplvmcg
     1621 phglkflkpv elrlphcdpk twqnkslpgd pnylvgancv svlidhf
//
LOCUS       XP_041324665            1417 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 609 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324665
VERSION     XP_041324665.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468731.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1417
                     /product="zinc finger protein 609 isoform X1"
                     /calculated_mol_wt=151528
     Region          <497..533
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..1417
                     /gene="ZNF609"
                     /coded_by="XM_041468731.1:27..4280"
                     /db_xref="GeneID:121354275"
ORIGIN      
        1 mslssgasgg kgidanpvet ydsgdewdig vgnliidlda dlekdqqkle msgskevglp
       61 apnavatlpd nikfvspvpg pqgkegksks krsktgkdsg kptpgsslft pnegaggkke
      121 vqgrsgdgan sgglvpavtp ksseksakas rsvagskkek eggsskskke rsegagtaae
      181 kepsvlqpla lavrvgqydg gqgtepaaae qlgsiaidtg aalnplgvks eledgesecr
      241 qlkkvksekm espvstpavl plhllvpvvn ndisspceqi mvrtrsvgvn tcdvalatep
      301 eclgpcepgt svnlegivwq etedgmlvvn vtwrnktyvg tlldctqhdw apprfcdspt
      361 sdlemrngrg rgkrmrpnsn tpvneaaaas dskgtsnssk traganskgr rgsqnssdhr
      421 tppggtaedv kaspssvtkr kskplsdmdl nsssedskgs krirtnsmgs atvppatvkv
      481 epavlerncp spilidcphp ncnkkykhin glkyhqahah tdddsklead vdseygeeps
      541 lhtdigscng aagtqkgsls parsatpkvr lmephspsps skfsakvpck kkvggegdtd
      601 lgalsndgse dgpsvadets nddfdslekr cidkdkskks sgakqekvps kslksarpia
      661 paippqpiyt fqtatlttas pgssaglatt vvqtmpnspq lkpiqpkptv mgepfavnpa
      721 ltpskekkkk dkkkkepkev enpltpgkac raeegkspfr gesselgmkg egllngssdp
      781 hqsrlasika eadkiysftd napspsigga srlentnpaq pltplhvvtq ngaeassvkt
      841 nspaysdisd agedgegkle svkakdpeql vkegakkalf ppqpqskesp fyqgfetyys
      901 pgypqaspgp lnpsgqsaae tqtlklkkde eqenpevkvk segceekkae lgsgssqqps
      961 viqqrpnmym qslyynqyay vppygyseqg yhahllstnp ayrqqyeeqq kqrqsleqqq
     1021 qrglekkael glkereaalk eewkqkppmp ptltkapslt dlvksglskp keqggpdmak
     1081 sviipkleds sklsssqvae glkvklseag hlgketaetk agsecgrqae vdpvlwyrqe
     1141 aeprmwtyvy pakysdikte derwkeerdr klkeernrsk easskedgke stsseckltp
     1201 teearmvgkd prpsvhvpvs spltqhqsyi pymhgysysq sydpnhpsyr amptvmmqny
     1261 pgsylpssys fspygskasg sddsdksras psvsckssse skaldilqqh ashykskspt
     1321 isektsqerd rsgcgvvggg gscssvggaa agersgdrpr tspsqrllst hhhhhhlgys
     1381 llpaqynlpy atglsstaiv asqqgsapsl yppprrm
//
LOCUS       XP_041324666            1416 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 609 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324666
VERSION     XP_041324666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468732.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1416
                     /product="zinc finger protein 609 isoform X2"
                     /calculated_mol_wt=151397
     Region          <497..533
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     CDS             1..1416
                     /gene="ZNF609"
                     /coded_by="XM_041468732.1:27..4277"
                     /db_xref="GeneID:121354275"
ORIGIN      
        1 mslssgasgg kgidanpvet ydsgdewdig vgnliidlda dlekdqqkle msgskevglp
       61 apnavatlpd nikfvspvpg pqgkegksks krsktgkdsg kptpgsslft pnegaggkke
      121 vqgrsgdgan sgglvpavtp ksseksakas rsvagskkek eggsskskke rsegagtaae
      181 kepsvlqpla lavrvgqydg gqgtepaaae qlgsiaidtg aalnplgvks eledgesecr
      241 qlkkvksekm espvstpavl plhllvpvvn ndisspceqi mvrtrsvgvn tcdvalatep
      301 eclgpcepgt svnlegivwq etedgmlvvn vtwrnktyvg tlldctqhdw apprfcdspt
      361 sdlemrngrg rgkrmrpnsn tpvneaaaas dskgtsnssk traganskgr rgsqnssdhr
      421 tppggtaedv kaspssvtkr kskplsdmdl nsssedskgs krirtnsmgs atvppatvkv
      481 epavlerncp spilidcphp ncnkkykhin glkyhqahah tdddsklead vdseygeeps
      541 lhtdigscng aagtqkgsls parsatpkvr lmephspsps skfsakvpck kkvggegdtd
      601 lgalsndgse dgpsvadets nddfdslekr cidkdkskks sgakqekvps kslksarpia
      661 paippqpiyt fqtatlttas pgssaglatt vvqtmpnspq lkpiqpkptv mgepfavnpa
      721 ltpskekkkk dkkkkepkev enpltpgkac raeegkspfr gesselgmkg egllngssdp
      781 hqsrlasika eadkiysftd napspsigga srlentnpaq pltplhvvtq ngaeassvkt
      841 nspaysdisd agedgegkle svkakdpeql vkegakkalf ppqpqskesp fyqgfetyys
      901 pgypqaspgp lnpsgqsaae tqtlklkkde eqenpevkvk segceekkae lgsgssqqps
      961 viqqrpnmym qslyynqyay vppygyseqg yhahllstnp ayrqqyeeqq kqrqsleqqq
     1021 qrglekkael glkereaalk eewkqkppmp ptltkapslt dlvksglskp keqggpdmak
     1081 sviipkleds sklsssqvae glkvklseag hlgketaetk agsecgrqae vdpvlwyrqe
     1141 aeprmwtyvy pakysdikte derwkeerdr klkeernrsk easskedgke stsseckltp
     1201 teearmvgkd prpsvhvpvs spltqhqsyi pymhgysysq sydpnhpsyr amptvmmqny
     1261 pgsylpssys fspygskasg sddsdksras psvsckssse skaldilqqh ashykskspt
     1321 isektsqerd rsgcgvvggg gscssvggaa agersgdrpr tspsqrllst hhhhhhlgys
     1381 llpaqynlpy atglsstaiv asqqgsapsl yppprr
//
LOCUS       XP_041324667             505 aa            linear   VRT 06-MAY-2021
DEFINITION  activating signal cointegrator 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324667
VERSION     XP_041324667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..505
                     /product="activating signal cointegrator 1"
                     /calculated_mol_wt=57006
     Region          358..471
                     /region_name="ASCH_ASC-1_like"
                     /note="ASC-1 homology domain, ASC-1-like subfamily. The
                     ASCH domain, a small beta-barrel domain found in all three
                     kingdoms of life, resembles the RNA-binding PUA domain and
                     may also interact with RNA. ASCH has been proposed to
                     function as an RNA-binding domain...; cd06554"
                     /db_xref="CDD:119346"
     CDS             1..505
                     /gene="TRIP4"
                     /coded_by="XM_041468733.1:59..1576"
                     /db_xref="GeneID:121354276"
ORIGIN      
        1 maapsallaw cvqhlrgdfg ldvgedvvry ilsitnedei reyvvdlvqg tdgkkswfve
       61 ellsrwrksa qlpsepfpay rkkdealevp ragdqgkkgk rkgrnkqetp aysepsahge
      121 evktpldlak vctkeeqdil qrdsnksqkl lkklmagaes sgnldaiskg llpqqearlk
      181 sglemavkhk dkllefdrts vrrtqvidde sdyfatdsnq wlskqereal qkreqelrel
      241 rhasrlakki tidfagrqil eednnmaeyh skldetiaam scgalsepar spgaemtpns
      301 gvlvnprllq paplwvdqtg llpqrktvrs meagsesgle rnrlriqdre lqeisddgwc
      361 lslhqpwasl lvrgikrveg rtwytshrgr lwiaatakrp spqeiselea tyrmllrkdv
      421 efpsdypsgc llgcvdvtdc lsqeqfqeqy pdlsqesgsp fvfictnpqe mvlkfpikgk
      481 hkiwkldaki hqgakkglmk qkavg
//
LOCUS       XP_041324668             656 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA polymerase-associated protein LEO1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324668
VERSION     XP_041324668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..656
                     /product="RNA polymerase-associated protein LEO1"
                     /calculated_mol_wt=74568
     Region          <10..262
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          364..526
                     /region_name="Leo1"
                     /note="Leo1-like protein; pfam04004"
                     /db_xref="CDD:461126"
     CDS             1..656
                     /gene="LEO1"
                     /coded_by="XM_041468734.1:93..2063"
                     /db_xref="GeneID:121354277"
ORIGIN      
        1 madmadlfgs dadsepehkd sdsgsdsdse qehagsgsna sgsdsdqddd reaikpsnke
       61 lfgddseddg ashrsgsdnh sersynrseg sghednedne qsdgeqhsas eaahdedede
      121 rehgseegsh rsegdgsdka hsedekwgke dksdqsddee rqqnsddeer qqnsddeekv
      181 qnsdederpq vsddeerlqn sdeekmqnsd deerpqasde ekmqnsddde raqrseeeki
      241 qnsddeeraq hsdeeeqehk sesargsdse devlrmkrkk piasdseaes dtegqkehad
      301 vmdlfggadd issgsdgedk pptpgqpide nglsqeqqee epipetriev eipkvntdlg
      361 ndlyfvklpn flsveprpfd pqyyedefed eemldeegrt rlklkventi rwrmrrdeeg
      421 neiresnari vkwsdgsmsl hlgnevfdvy kaplqgdhnh lfirqgtglq gqavfktklt
      481 frphstdsat hrkmtlslad rcsktqkiri lpmagrdpes qrtemikkee erlrasirre
      541 sqqrrmrekq hqrglsasyl epdrydeede gddaislaai knrykggire erariyssds
      601 degsdedktq rllkakklns deegepsgkr kaddddkask kpkkyvisde eeeddd
//
LOCUS       XP_041324669             351 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomodulin-3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324669
VERSION     XP_041324669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="tropomodulin-3-like"
                     /calculated_mol_wt=39325
     Region          5..146
                     /region_name="Tropomodulin"
                     /note="pfam03250"
                     /db_xref="CDD:460862"
     Region          <130..317
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     CDS             1..351
                     /gene="LOC121354278"
                     /coded_by="XM_041468735.1:385..1440"
                     /db_xref="GeneID:121354278"
ORIGIN      
        1 mtlpfrkdld kykdldedei lgklseeelk qletvlddld penallpagf rqkdqtakka
       61 sgpfdrerll aylekqaley kdredyvpft rekkgkifip kqkpvqsfte ekfsldpele
      121 ealtsatdte lgdlaailgm snlitnnqfc dvvgssngid kdsfsnivkg ekmlpvfdep
      181 pnptnveetl qrikdndsrl vevnlnnikn ipiptlkefa kaletnthvk nfslaatrsn
      241 dpvavaladm lrvntklksl niesnfitgv gvmalvdalk dnetlteiki dnqrqqlgta
      301 aeveiakmle ennkilkfgy hftqqgprar aaaaitknnd lvrkrrvegd n
//
LOCUS       XP_041324670            1875 aa            linear   VRT 06-MAY-2021
DEFINITION  C-myc promoter-binding protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324670
VERSION     XP_041324670.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468736.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1875
                     /product="C-myc promoter-binding protein isoform X1"
                     /calculated_mol_wt=209936
     Region          193..275
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..491
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          558..631
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          807..847
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          809..838
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1875
                     /gene="DENND4A"
                     /coded_by="XM_041468736.1:620..6247"
                     /db_xref="GeneID:121354280"
ORIGIN      
        1 medkgarvad yfvvagltdi skpleeeihf ndachkiakp kepitdvtvl nkslgeevpq
       61 gykcidvtps glsadlnngs lvgpqiylcy rrgrdkpplt dlgvlydgke rvkqgceiiq
      121 stpygrpani sgsassqrvy ityrrasenm tqntlavtdi ciiipskget pphtfckvdk
      181 nlnnsmwgsa vylcykksva ktntisykag licrypeedy esfplpesvp lfclpmgati
      241 ecwpsnskyp lpvfstfvlt gasaekvyga aiqfyelype enltekqksq lglaaavegk
      301 dtcrtvqtnk cicllshwpf fdafkkfltf lyrysisgph vlpiekhish fmhkvpfpsp
      361 qrprilvqls phdnlilsqp vssplplsgg kfstllqnlg penavtllvf avtehkilih
      421 slrpsvltsv tealvsmifp fhwpcpyipl cplaladvls apcpfivgid sryfdlydpp
      481 pdvscvdldt ntisqtgdkk tiawkilpkk pcknlmntln tlyqqlaelq qrpredalme
      541 lamndydfns gkklhlldle iqeaflcfma silkgyrsyl rpiteapset atdasslfel
      601 qgflksrdrs hqkfytlmtk tqmfirfiee csfvsdkdas laffddcvdk vdmdktgetr
      661 lieldesyks ehtvfitppe iphlpngeeh plqysyngfp vlklelferp egflrapnnk
      721 lsskasspns pspmfrrtkq eiksahkiak kyssipqmws rcllrhcygl wficlpayvk
      781 vchskvralr taydvlqkmh tkkidppdev cyrvlmqlcg qygqpvlavr vlfemqkagi
      841 dpnaitygyy nkavlestwp ssnrggyflw mkirnvvlgi aqfkkalkkl pastahtsvp
      901 gglsdtannt slkeeakqgk tclqdiqeqk edkresdsss lsevestkgs gdclpklnyq
      961 nsssdkatss ivrlngtids tvaegsress vgllftssfe daneaeviks kslrkrhksa
     1021 veadlrempw esrnrnlsgd glvglminri nqeanpgeiv eklgadakil ssalqksirp
     1081 ktlnirsssl eskresleke ssdedaafdc sftdktespv ifdledldge petptavkts
     1141 sekskklqrk ssfpvkpvek tdvetgfdpl sllvaeteqq keeeeddddr sistpsarrd
     1201 laeeivmymn nmssplssra psielqkpfd drnankrspt iiqpcrrssl ppnsprppsl
     1261 tksksyhakh eerprdrlws spayspnspa keqdtasalt lvsspsfnld tlltpkfdvl
     1321 kssmfsagkg vaekaskwys kfamyaasak dqnsdrasvs slgaldsest sltdedvcnd
     1381 fesaspqent tseikgisis ktslessash dssakqfdqc gslskfplpd kselvsscst
     1441 sstsvfqnya mevlisscsr crtcdclvhd eeimagwtad dsnlnttcpf cgnlflpfls
     1501 ieirdlrrpg ryflksspst enmqfpslfs nqsgkscnnt atvglttslm svqedinsns
     1561 kskqhdnvya rsiqipsgrr qnasgsects hpvarsistf gpleedeken qkishiiptg
     1621 slpatlqgpt dslglewrlp spdpitvpyl splvvwkele sllenegdha itvadfvdhh
     1681 pivfwnlvwy frrldlpsnl pglilssehc nknskiprnc msedskyvli qmlwdnmklh
     1741 qdprqplyil wnaqtqkypm vqllqkddds fnqellrsmv ksikmndvyg pmsqilerln
     1801 kwphikrqrs lyreilflsl valgrdnidi dafdreykma ydrltanqvk nthncdrpps
     1861 tgvmecrkif gepyl
//
LOCUS       XP_041324671            1875 aa            linear   VRT 06-MAY-2021
DEFINITION  C-myc promoter-binding protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324671
VERSION     XP_041324671.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468737.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1875
                     /product="C-myc promoter-binding protein isoform X1"
                     /calculated_mol_wt=209936
     Region          193..275
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..491
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          558..631
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          807..847
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          809..838
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1875
                     /gene="DENND4A"
                     /coded_by="XM_041468737.1:182..5809"
                     /db_xref="GeneID:121354280"
ORIGIN      
        1 medkgarvad yfvvagltdi skpleeeihf ndachkiakp kepitdvtvl nkslgeevpq
       61 gykcidvtps glsadlnngs lvgpqiylcy rrgrdkpplt dlgvlydgke rvkqgceiiq
      121 stpygrpani sgsassqrvy ityrrasenm tqntlavtdi ciiipskget pphtfckvdk
      181 nlnnsmwgsa vylcykksva ktntisykag licrypeedy esfplpesvp lfclpmgati
      241 ecwpsnskyp lpvfstfvlt gasaekvyga aiqfyelype enltekqksq lglaaavegk
      301 dtcrtvqtnk cicllshwpf fdafkkfltf lyrysisgph vlpiekhish fmhkvpfpsp
      361 qrprilvqls phdnlilsqp vssplplsgg kfstllqnlg penavtllvf avtehkilih
      421 slrpsvltsv tealvsmifp fhwpcpyipl cplaladvls apcpfivgid sryfdlydpp
      481 pdvscvdldt ntisqtgdkk tiawkilpkk pcknlmntln tlyqqlaelq qrpredalme
      541 lamndydfns gkklhlldle iqeaflcfma silkgyrsyl rpiteapset atdasslfel
      601 qgflksrdrs hqkfytlmtk tqmfirfiee csfvsdkdas laffddcvdk vdmdktgetr
      661 lieldesyks ehtvfitppe iphlpngeeh plqysyngfp vlklelferp egflrapnnk
      721 lsskasspns pspmfrrtkq eiksahkiak kyssipqmws rcllrhcygl wficlpayvk
      781 vchskvralr taydvlqkmh tkkidppdev cyrvlmqlcg qygqpvlavr vlfemqkagi
      841 dpnaitygyy nkavlestwp ssnrggyflw mkirnvvlgi aqfkkalkkl pastahtsvp
      901 gglsdtannt slkeeakqgk tclqdiqeqk edkresdsss lsevestkgs gdclpklnyq
      961 nsssdkatss ivrlngtids tvaegsress vgllftssfe daneaeviks kslrkrhksa
     1021 veadlrempw esrnrnlsgd glvglminri nqeanpgeiv eklgadakil ssalqksirp
     1081 ktlnirsssl eskresleke ssdedaafdc sftdktespv ifdledldge petptavkts
     1141 sekskklqrk ssfpvkpvek tdvetgfdpl sllvaeteqq keeeeddddr sistpsarrd
     1201 laeeivmymn nmssplssra psielqkpfd drnankrspt iiqpcrrssl ppnsprppsl
     1261 tksksyhakh eerprdrlws spayspnspa keqdtasalt lvsspsfnld tlltpkfdvl
     1321 kssmfsagkg vaekaskwys kfamyaasak dqnsdrasvs slgaldsest sltdedvcnd
     1381 fesaspqent tseikgisis ktslessash dssakqfdqc gslskfplpd kselvsscst
     1441 sstsvfqnya mevlisscsr crtcdclvhd eeimagwtad dsnlnttcpf cgnlflpfls
     1501 ieirdlrrpg ryflksspst enmqfpslfs nqsgkscnnt atvglttslm svqedinsns
     1561 kskqhdnvya rsiqipsgrr qnasgsects hpvarsistf gpleedeken qkishiiptg
     1621 slpatlqgpt dslglewrlp spdpitvpyl splvvwkele sllenegdha itvadfvdhh
     1681 pivfwnlvwy frrldlpsnl pglilssehc nknskiprnc msedskyvli qmlwdnmklh
     1741 qdprqplyil wnaqtqkypm vqllqkddds fnqellrsmv ksikmndvyg pmsqilerln
     1801 kwphikrqrs lyreilflsl valgrdnidi dafdreykma ydrltanqvk nthncdrpps
     1861 tgvmecrkif gepyl
//
LOCUS       XP_041324672            1875 aa            linear   VRT 06-MAY-2021
DEFINITION  C-myc promoter-binding protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324672
VERSION     XP_041324672.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468738.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1875
                     /product="C-myc promoter-binding protein isoform X1"
                     /calculated_mol_wt=209936
     Region          193..275
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..491
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          558..631
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          807..847
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          809..838
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1875
                     /gene="DENND4A"
                     /coded_by="XM_041468738.1:617..6244"
                     /db_xref="GeneID:121354280"
ORIGIN      
        1 medkgarvad yfvvagltdi skpleeeihf ndachkiakp kepitdvtvl nkslgeevpq
       61 gykcidvtps glsadlnngs lvgpqiylcy rrgrdkpplt dlgvlydgke rvkqgceiiq
      121 stpygrpani sgsassqrvy ityrrasenm tqntlavtdi ciiipskget pphtfckvdk
      181 nlnnsmwgsa vylcykksva ktntisykag licrypeedy esfplpesvp lfclpmgati
      241 ecwpsnskyp lpvfstfvlt gasaekvyga aiqfyelype enltekqksq lglaaavegk
      301 dtcrtvqtnk cicllshwpf fdafkkfltf lyrysisgph vlpiekhish fmhkvpfpsp
      361 qrprilvqls phdnlilsqp vssplplsgg kfstllqnlg penavtllvf avtehkilih
      421 slrpsvltsv tealvsmifp fhwpcpyipl cplaladvls apcpfivgid sryfdlydpp
      481 pdvscvdldt ntisqtgdkk tiawkilpkk pcknlmntln tlyqqlaelq qrpredalme
      541 lamndydfns gkklhlldle iqeaflcfma silkgyrsyl rpiteapset atdasslfel
      601 qgflksrdrs hqkfytlmtk tqmfirfiee csfvsdkdas laffddcvdk vdmdktgetr
      661 lieldesyks ehtvfitppe iphlpngeeh plqysyngfp vlklelferp egflrapnnk
      721 lsskasspns pspmfrrtkq eiksahkiak kyssipqmws rcllrhcygl wficlpayvk
      781 vchskvralr taydvlqkmh tkkidppdev cyrvlmqlcg qygqpvlavr vlfemqkagi
      841 dpnaitygyy nkavlestwp ssnrggyflw mkirnvvlgi aqfkkalkkl pastahtsvp
      901 gglsdtannt slkeeakqgk tclqdiqeqk edkresdsss lsevestkgs gdclpklnyq
      961 nsssdkatss ivrlngtids tvaegsress vgllftssfe daneaeviks kslrkrhksa
     1021 veadlrempw esrnrnlsgd glvglminri nqeanpgeiv eklgadakil ssalqksirp
     1081 ktlnirsssl eskresleke ssdedaafdc sftdktespv ifdledldge petptavkts
     1141 sekskklqrk ssfpvkpvek tdvetgfdpl sllvaeteqq keeeeddddr sistpsarrd
     1201 laeeivmymn nmssplssra psielqkpfd drnankrspt iiqpcrrssl ppnsprppsl
     1261 tksksyhakh eerprdrlws spayspnspa keqdtasalt lvsspsfnld tlltpkfdvl
     1321 kssmfsagkg vaekaskwys kfamyaasak dqnsdrasvs slgaldsest sltdedvcnd
     1381 fesaspqent tseikgisis ktslessash dssakqfdqc gslskfplpd kselvsscst
     1441 sstsvfqnya mevlisscsr crtcdclvhd eeimagwtad dsnlnttcpf cgnlflpfls
     1501 ieirdlrrpg ryflksspst enmqfpslfs nqsgkscnnt atvglttslm svqedinsns
     1561 kskqhdnvya rsiqipsgrr qnasgsects hpvarsistf gpleedeken qkishiiptg
     1621 slpatlqgpt dslglewrlp spdpitvpyl splvvwkele sllenegdha itvadfvdhh
     1681 pivfwnlvwy frrldlpsnl pglilssehc nknskiprnc msedskyvli qmlwdnmklh
     1741 qdprqplyil wnaqtqkypm vqllqkddds fnqellrsmv ksikmndvyg pmsqilerln
     1801 kwphikrqrs lyreilflsl valgrdnidi dafdreykma ydrltanqvk nthncdrpps
     1861 tgvmecrkif gepyl
//
LOCUS       XP_041324673            1875 aa            linear   VRT 06-MAY-2021
DEFINITION  C-myc promoter-binding protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324673
VERSION     XP_041324673.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468739.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1875
                     /product="C-myc promoter-binding protein isoform X1"
                     /calculated_mol_wt=209936
     Region          193..275
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..491
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          558..631
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          807..847
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          809..838
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1875
                     /gene="DENND4A"
                     /coded_by="XM_041468739.1:534..6161"
                     /db_xref="GeneID:121354280"
ORIGIN      
        1 medkgarvad yfvvagltdi skpleeeihf ndachkiakp kepitdvtvl nkslgeevpq
       61 gykcidvtps glsadlnngs lvgpqiylcy rrgrdkpplt dlgvlydgke rvkqgceiiq
      121 stpygrpani sgsassqrvy ityrrasenm tqntlavtdi ciiipskget pphtfckvdk
      181 nlnnsmwgsa vylcykksva ktntisykag licrypeedy esfplpesvp lfclpmgati
      241 ecwpsnskyp lpvfstfvlt gasaekvyga aiqfyelype enltekqksq lglaaavegk
      301 dtcrtvqtnk cicllshwpf fdafkkfltf lyrysisgph vlpiekhish fmhkvpfpsp
      361 qrprilvqls phdnlilsqp vssplplsgg kfstllqnlg penavtllvf avtehkilih
      421 slrpsvltsv tealvsmifp fhwpcpyipl cplaladvls apcpfivgid sryfdlydpp
      481 pdvscvdldt ntisqtgdkk tiawkilpkk pcknlmntln tlyqqlaelq qrpredalme
      541 lamndydfns gkklhlldle iqeaflcfma silkgyrsyl rpiteapset atdasslfel
      601 qgflksrdrs hqkfytlmtk tqmfirfiee csfvsdkdas laffddcvdk vdmdktgetr
      661 lieldesyks ehtvfitppe iphlpngeeh plqysyngfp vlklelferp egflrapnnk
      721 lsskasspns pspmfrrtkq eiksahkiak kyssipqmws rcllrhcygl wficlpayvk
      781 vchskvralr taydvlqkmh tkkidppdev cyrvlmqlcg qygqpvlavr vlfemqkagi
      841 dpnaitygyy nkavlestwp ssnrggyflw mkirnvvlgi aqfkkalkkl pastahtsvp
      901 gglsdtannt slkeeakqgk tclqdiqeqk edkresdsss lsevestkgs gdclpklnyq
      961 nsssdkatss ivrlngtids tvaegsress vgllftssfe daneaeviks kslrkrhksa
     1021 veadlrempw esrnrnlsgd glvglminri nqeanpgeiv eklgadakil ssalqksirp
     1081 ktlnirsssl eskresleke ssdedaafdc sftdktespv ifdledldge petptavkts
     1141 sekskklqrk ssfpvkpvek tdvetgfdpl sllvaeteqq keeeeddddr sistpsarrd
     1201 laeeivmymn nmssplssra psielqkpfd drnankrspt iiqpcrrssl ppnsprppsl
     1261 tksksyhakh eerprdrlws spayspnspa keqdtasalt lvsspsfnld tlltpkfdvl
     1321 kssmfsagkg vaekaskwys kfamyaasak dqnsdrasvs slgaldsest sltdedvcnd
     1381 fesaspqent tseikgisis ktslessash dssakqfdqc gslskfplpd kselvsscst
     1441 sstsvfqnya mevlisscsr crtcdclvhd eeimagwtad dsnlnttcpf cgnlflpfls
     1501 ieirdlrrpg ryflksspst enmqfpslfs nqsgkscnnt atvglttslm svqedinsns
     1561 kskqhdnvya rsiqipsgrr qnasgsects hpvarsistf gpleedeken qkishiiptg
     1621 slpatlqgpt dslglewrlp spdpitvpyl splvvwkele sllenegdha itvadfvdhh
     1681 pivfwnlvwy frrldlpsnl pglilssehc nknskiprnc msedskyvli qmlwdnmklh
     1741 qdprqplyil wnaqtqkypm vqllqkddds fnqellrsmv ksikmndvyg pmsqilerln
     1801 kwphikrqrs lyreilflsl valgrdnidi dafdreykma ydrltanqvk nthncdrpps
     1861 tgvmecrkif gepyl
//
LOCUS       XP_041324674            1766 aa            linear   VRT 06-MAY-2021
DEFINITION  C-myc promoter-binding protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324674
VERSION     XP_041324674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1766
                     /product="C-myc promoter-binding protein isoform X2"
                     /calculated_mol_wt=197018
     Region          193..275
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          308..491
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; pfam02141"
                     /db_xref="CDD:460461"
     Region          558..631
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          807..847
                     /region_name="PPR_2"
                     /note="PPR repeat family; pfam13041"
                     /db_xref="CDD:463778"
     Region          809..838
                     /region_name="PPR repeat"
                     /note="PPR repeat [structural motif]"
                     /db_xref="CDD:276811"
     CDS             1..1766
                     /gene="DENND4A"
                     /coded_by="XM_041468740.1:622..5922"
                     /db_xref="GeneID:121354280"
ORIGIN      
        1 medkgarvad yfvvagltdi skpleeeihf ndachkiakp kepitdvtvl nkslgeevpq
       61 gykcidvtps glsadlnngs lvgpqiylcy rrgrdkpplt dlgvlydgke rvkqgceiiq
      121 stpygrpani sgsassqrvy ityrrasenm tqntlavtdi ciiipskget pphtfckvdk
      181 nlnnsmwgsa vylcykksva ktntisykag licrypeedy esfplpesvp lfclpmgati
      241 ecwpsnskyp lpvfstfvlt gasaekvyga aiqfyelype enltekqksq lglaaavegk
      301 dtcrtvqtnk cicllshwpf fdafkkfltf lyrysisgph vlpiekhish fmhkvpfpsp
      361 qrprilvqls phdnlilsqp vssplplsgg kfstllqnlg penavtllvf avtehkilih
      421 slrpsvltsv tealvsmifp fhwpcpyipl cplaladvls apcpfivgid sryfdlydpp
      481 pdvscvdldt ntisqtgdkk tiawkilpkk pcknlmntln tlyqqlaelq qrpredalme
      541 lamndydfns gkklhlldle iqeaflcfma silkgyrsyl rpiteapset atdasslfel
      601 qgflksrdrs hqkfytlmtk tqmfirfiee csfvsdkdas laffddcvdk vdmdktgetr
      661 lieldesyks ehtvfitppe iphlpngeeh plqysyngfp vlklelferp egflrapnnk
      721 lsskasspns pspmfrrtkq eiksahkiak kyssipqmws rcllrhcygl wficlpayvk
      781 vchskvralr taydvlqkmh tkkidppdev cyrvlmqlcg qygqpvlavr vlfemqkagi
      841 dpnaitygyy nkavlestwp ssnrggyflw mkirnvvlgi aqfkkalkkl pastahtsvp
      901 gglsdtannt slkeeakqgk tclqdiqeqk edkresdsss lsevestkgs gdclpklnyq
      961 nsssdkatss ivrlngtids tvaegsress vgllftssfe daneaeviks kslrkrhksa
     1021 veadlrempw esrnrnlsgd glvglminri nqeanpgeiv eklgadakil ssalqksirp
     1081 ktlnirsssl eskresleke ssdedaafdc sftdktespv ifdledldge petptavkts
     1141 sekskklqrk ssfpvkpvek tdvetgfdpl sllvaeteqq keeeeddddr sistpsarrd
     1201 laeeivmymn nmssplssra psielqkpfd drnankrspt iiqpcrrssl ppnsprppsl
     1261 tksksyhakh eerprdrlws spayspnspa keqdtasalt lvsspsfnld tlltpkfdvl
     1321 kssmfsagkg vaekaskwys kfamyaasak dqnsdrasvs slgaldsest sltdedvcnd
     1381 fesaspqent tseikgisis ktslessash dssakqfdqc gslskfplpd kselvsscst
     1441 sstsvfqnya mevlisscsr crtcdclvhd eeimagwtad dsnlnttcpf cgnlflpfls
     1501 ieirdlrrpg ryflksspst enmqfpslfs nqsgkscnnt atvglttslm svqedinsns
     1561 kskqhdnvya rsiqipsgrr qnasgsects hpvarsistf gpleedeken qkishiiptg
     1621 slpatlqgpt dslglewrlp spdpitvpyl splvvwkele sllenegdha itvadfvdhh
     1681 pivfwnlvwy frrldlpsnl pglilssehc nknskiprnc msedskyvli qmlwdnmklh
     1741 qdprqplyil wnaqsqnrtl lfesec
//
LOCUS       XP_041324675             324 aa            linear   VRT 06-MAY-2021
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324675
VERSION     XP_041324675.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468741.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=37370
     Region          49..162
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          146..294
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..324
                     /gene="BNIP2"
                     /coded_by="XM_041468741.1:310..1284"
                     /db_xref="GeneID:121354282"
ORIGIN      
        1 megvefkeew qdedfprplp eddpvesdgl aaagtenead tegngtklrk klmapdislt
       61 ldpseesvls ddldesgeid lddldtpsen snefeweddl pkpkttdvvr kgslaeytva
      121 eekddgrrwr mfrigeqdhr vdmkaiepyk kvishggyyg dglnaivvfa vcfmpessqp
      181 nyrylmdnlf kyvigtlell vaenymivyl ngattrrkmp slgwlrkcyq qidrrlrknl
      241 ksliivhpsw firtllaitk pfisskfsqk iryvftlael aelipmeyvg ipecikqyee
      301 ekfrkkqkrv dqelngkqeq kseq
//
LOCUS       XP_041324676             324 aa            linear   VRT 06-MAY-2021
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324676
VERSION     XP_041324676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=37370
     Region          49..162
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          146..294
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..324
                     /gene="BNIP2"
                     /coded_by="XM_041468742.1:325..1299"
                     /db_xref="GeneID:121354282"
ORIGIN      
        1 megvefkeew qdedfprplp eddpvesdgl aaagtenead tegngtklrk klmapdislt
       61 ldpseesvls ddldesgeid lddldtpsen snefeweddl pkpkttdvvr kgslaeytva
      121 eekddgrrwr mfrigeqdhr vdmkaiepyk kvishggyyg dglnaivvfa vcfmpessqp
      181 nyrylmdnlf kyvigtlell vaenymivyl ngattrrkmp slgwlrkcyq qidrrlrknl
      241 ksliivhpsw firtllaitk pfisskfsqk iryvftlael aelipmeyvg ipecikqyee
      301 ekfrkkqkrv dqelngkqeq kseq
//
LOCUS       XP_041324677             324 aa            linear   VRT 06-MAY-2021
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324677
VERSION     XP_041324677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=37370
     Region          49..162
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          146..294
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..324
                     /gene="BNIP2"
                     /coded_by="XM_041468743.1:566..1540"
                     /db_xref="GeneID:121354282"
ORIGIN      
        1 megvefkeew qdedfprplp eddpvesdgl aaagtenead tegngtklrk klmapdislt
       61 ldpseesvls ddldesgeid lddldtpsen snefeweddl pkpkttdvvr kgslaeytva
      121 eekddgrrwr mfrigeqdhr vdmkaiepyk kvishggyyg dglnaivvfa vcfmpessqp
      181 nyrylmdnlf kyvigtlell vaenymivyl ngattrrkmp slgwlrkcyq qidrrlrknl
      241 ksliivhpsw firtllaitk pfisskfsqk iryvftlael aelipmeyvg ipecikqyee
      301 ekfrkkqkrv dqelngkqeq kseq
//
LOCUS       XP_041324678             324 aa            linear   VRT 06-MAY-2021
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324678
VERSION     XP_041324678.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468744.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=37370
     Region          49..162
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          146..294
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..324
                     /gene="BNIP2"
                     /coded_by="XM_041468744.1:239..1213"
                     /db_xref="GeneID:121354282"
ORIGIN      
        1 megvefkeew qdedfprplp eddpvesdgl aaagtenead tegngtklrk klmapdislt
       61 ldpseesvls ddldesgeid lddldtpsen snefeweddl pkpkttdvvr kgslaeytva
      121 eekddgrrwr mfrigeqdhr vdmkaiepyk kvishggyyg dglnaivvfa vcfmpessqp
      181 nyrylmdnlf kyvigtlell vaenymivyl ngattrrkmp slgwlrkcyq qidrrlrknl
      241 ksliivhpsw firtllaitk pfisskfsqk iryvftlael aelipmeyvg ipecikqyee
      301 ekfrkkqkrv dqelngkqeq kseq
//
LOCUS       XP_041324679             324 aa            linear   VRT 06-MAY-2021
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324679
VERSION     XP_041324679.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468745.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X1"
                     /calculated_mol_wt=37370
     Region          49..162
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          146..294
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..324
                     /gene="BNIP2"
                     /coded_by="XM_041468745.1:310..1284"
                     /db_xref="GeneID:121354282"
ORIGIN      
        1 megvefkeew qdedfprplp eddpvesdgl aaagtenead tegngtklrk klmapdislt
       61 ldpseesvls ddldesgeid lddldtpsen snefeweddl pkpkttdvvr kgslaeytva
      121 eekddgrrwr mfrigeqdhr vdmkaiepyk kvishggyyg dglnaivvfa vcfmpessqp
      181 nyrylmdnlf kyvigtlell vaenymivyl ngattrrkmp slgwlrkcyq qidrrlrknl
      241 ksliivhpsw firtllaitk pfisskfsqk iryvftlael aelipmeyvg ipecikqyee
      301 ekfrkkqkrv dqelngkqeq kseq
//
LOCUS       XP_041324680             312 aa            linear   VRT 06-MAY-2021
DEFINITION  BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324680
VERSION     XP_041324680.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468746.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="BCL2/adenovirus E1B 19 kDa protein-interacting
                     protein 2 isoform X2"
                     /calculated_mol_wt=35720
     Region          49..162
                     /region_name="BNIP2"
                     /note="Bcl2-/adenovirus E1B nineteen kDa-interacting
                     protein 2; pfam12496"
                     /db_xref="CDD:463609"
     Region          146..294
                     /region_name="SEC14"
                     /note="Domain in homologues of a S. cerevisiae
                     phosphatidylinositol transfer protein (Sec14p);
                     smart00516"
                     /db_xref="CDD:214706"
     CDS             1..312
                     /gene="BNIP2"
                     /coded_by="XM_041468746.1:312..1250"
                     /db_xref="GeneID:121354282"
ORIGIN      
        1 megvefkeew qdedfprplp eddpvesdgl aaagtenead tegngtklrk klmapdislt
       61 ldpseesvls ddldesgeid lddldtpsen snefeweddl pkpkttdvvr kgslaeytva
      121 eekddgrrwr mfrigeqdhr vdmkaiepyk kvishggyyg dglnaivvfa vcfmpessqp
      181 nyrylmdnlf kyvigtlell vaenymivyl ngattrrkmp slgwlrkcyq qidrrlrknl
      241 ksliivhpsw firtllaitk pfisskfsqk iryvftlael aelipmeyvg ipecikqvdq
      301 elngkqeqks eq
//
LOCUS       XP_041324681             109 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription initiation factor IIA subunit 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324681
VERSION     XP_041324681.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468747.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..109
                     /product="transcription initiation factor IIA subunit 2"
                     /calculated_mol_wt=12298
     Region          3..103
                     /region_name="TOA2"
                     /note="Transcription initiation factor IIA, gamma subunit
                     [Transcription]; COG5123"
                     /db_xref="CDD:227452"
     CDS             1..109
                     /gene="GTF2A2"
                     /coded_by="XM_041468747.1:368..697"
                     /db_xref="GeneID:121354284"
ORIGIN      
        1 mayqlyrntt lgnslqesld eliqsqqitp qlalqvllqf dkainsalaq rvrnrvnfrg
       61 slntyrfcdn vwtfvlndve frevtelvkv dkvkivacdg kntgsntae
//
LOCUS       XP_041324684             854 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324684
VERSION     XP_041324684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..854
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X1"
                     /calculated_mol_wt=96623
     Region          1..50
                     /region_name="PDE8"
                     /note="PDE8 phosphodiesterase; pfam08629"
                     /db_xref="CDD:400795"
     Region          107..>184
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          243..>350
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          581..831
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..854
                     /gene="PDE8A"
                     /coded_by="XM_041468750.1:1394..3958"
                     /db_xref="GeneID:121354285"
ORIGIN      
        1 mgcvpstnls dsrvichssn eseeynfphq tnttmsqqqq gnpvpglfik cyntstyear
       61 tnsskkdkre nsqsmeaeaq tgrsnvkapv tdvqfgpmrl hqdqlqvllv faeedeqsng
      121 frwacdkagf rcnlartpqs alecfldkhh diiiidhrhs ryfdaealcr sirttkasen
      181 tviicvvqrh tdreessilp lisagftrry venssrmacy neliqlefgq vqaqfklrac
      241 nslftaleks qeaieitsed hviqyvnpaf etmmgyqige liekeltevp inekkadfld
      301 tinscikigk ewqgmyyakk kngdsiqqnv kilpvigqgg kirhyvsisr lcndnnkvek
      361 tceciqaesq tdtqtcrhkd mrkgsldvrs ttsrgsdgss qrrrssmarv hsmtieapit
      421 kviniinaaq esspmpvaea ldraleilrt telyspqlgt kdedphtsdl vgglmtdglr
      481 rlsgneyils akqthqvags lsspislndi ppritqamen eeqwdfdife leaathkrpl
      541 vylglkifar fgiceflncs estlrswlqv ieanyhssns yhnsthsadv lhatayflsk
      601 ervkqtldpi devaaliaat vhdvdhpgrt nsflcnagse lailyndtav leshhaalaf
      661 qlttrdgkcn ifknmerney rtlrqviidm vlatemtkhf ehvnkfvnsi nkplaaleen
      721 gnngdgesik tvlrspenri likrmlikca disnpcrpre qciewagris eeyfaqtdee
      781 rrqglpvvmp vfdrntcsip ksqlsfidyf iidmfdawda fadlpnlmeh lnnnikywkg
      841 ldgrnlrvlr pppe
//
LOCUS       XP_041324685             757 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324685
VERSION     XP_041324685.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468751.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..757
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X2"
                     /calculated_mol_wt=85906
     Region          10..>87
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          146..>253
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          484..734
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..757
                     /gene="PDE8A"
                     /coded_by="XM_041468751.1:151..2424"
                     /db_xref="GeneID:121354285"
ORIGIN      
        1 mrlhqdqlqv llvfaeedeq sngfrwacdk agfrcnlart pqsalecfld khhdiiiidh
       61 rhsryfdaea lcrsirttka sentviicvv qrhtdreess ilplisagft rryvenssrm
      121 acyneliqle fgqvqaqfkl racnslftal eksqeaieit sedhviqyvn pafetmmgyq
      181 igeliekelt evpinekkad fldtinscik igkewqgmyy akkkngdsiq qnvkilpvig
      241 qggkirhyvs isrlcndnnk vektceciqa esqtdtqtcr hkdmrkgsld vrsttsrgsd
      301 gssqrrrssm arvhsmtiea pitkviniin aaqesspmpv aealdralei lrttelyspq
      361 lgtkdedpht sdlvgglmtd glrrlsgney ilsakqthqv agslsspisl ndippritqa
      421 meneeqwdfd ifeleaathk rplvylglki farfgicefl ncsestlrsw lqvieanyhs
      481 snsyhnsths advlhatayf lskervkqtl dpidevaali aatvhdvdhp grtnsflcna
      541 gselailynd tavleshhaa lafqlttrdg kcnifknmer neyrtlrqvi idmvlatemt
      601 khfehvnkfv nsinkplaal eengnngdge siktvlrspe nrilikrmli kcadisnpcr
      661 preqciewag riseeyfaqt deerrqglpv vmpvfdrntc sipksqlsfi dyfiidmfda
      721 wdafadlpnl mehlnnniky wkgldgrnlr vlrpppe
//
LOCUS       XP_041324686             792 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324686
VERSION     XP_041324686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X3"
                     /calculated_mol_wt=89634
     Region          45..>122
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          181..>288
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          519..769
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..792
                     /gene="PDE8A"
                     /coded_by="XM_041468752.1:142..2520"
                     /db_xref="GeneID:121354285"
ORIGIN      
        1 mpemgwrasi tlaadaftvg hskkeapvtd vqfgpmrlhq dqlqvllvfa eedeqsngfr
       61 wacdkagfrc nlartpqsal ecfldkhhdi iiidhrhsry fdaealcrsi rttkasentv
      121 iicvvqrhtd reessilpli sagftrryve nssrmacyne liqlefgqvq aqfklracns
      181 lftaleksqe aieitsedhv iqyvnpafet mmgyqigeli ekeltevpin ekkadfldti
      241 nscikigkew qgmyyakkkn gdsiqqnvki lpvigqggki rhyvsisrlc ndnnkvektc
      301 eciqaesqtd tqtcrhkdmr kgsldvrstt srgsdgssqr rrssmarvhs mtieapitkv
      361 iniinaaqes spmpvaeald raleilrtte lyspqlgtkd edphtsdlvg glmtdglrrl
      421 sgneyilsak qthqvagsls spislndipp ritqamenee qwdfdifele aathkrplvy
      481 lglkifarfg iceflncses tlrswlqvie anyhssnsyh nsthsadvlh atayflsker
      541 vkqtldpide vaaliaatvh dvdhpgrtns flcnagsela ilyndtavle shhaalafql
      601 ttrdgkcnif knmerneyrt lrqviidmvl atemtkhfeh vnkfvnsink plaaleengn
      661 ngdgesiktv lrspenrili krmlikcadi snpcrpreqc iewagrisee yfaqtdeerr
      721 qglpvvmpvf drntcsipks qlsfidyfii dmfdawdafa dlpnlmehln nnikywkgld
      781 grnlrvlrpp pe
//
LOCUS       XP_041324687             789 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324687
VERSION     XP_041324687.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468753.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..789
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X4"
                     /calculated_mol_wt=89297
     Region          42..>119
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          178..>285
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          516..766
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..789
                     /gene="PDE8A"
                     /coded_by="XM_041468753.1:624..2993"
                     /db_xref="GeneID:121354285"
ORIGIN      
        1 meenegadil etssvsngpw ckapvtdvqf gpmrlhqdql qvllvfaeed eqsngfrwac
       61 dkagfrcnla rtpqsalecf ldkhhdiiii dhrhsryfda ealcrsirtt kasentviic
      121 vvqrhtdree ssilplisag ftrryvenss rmacyneliq lefgqvqaqf klracnslft
      181 aleksqeaie itsedhviqy vnpafetmmg yqigelieke ltevpinekk adfldtinsc
      241 ikigkewqgm yyakkkngds iqqnvkilpv igqggkirhy vsisrlcndn nkvektceci
      301 qaesqtdtqt crhkdmrkgs ldvrsttsrg sdgssqrrrs smarvhsmti eapitkvini
      361 inaaqesspm pvaealdral eilrttelys pqlgtkdedp htsdlvgglm tdglrrlsgn
      421 eyilsakqth qvagslsspi slndipprit qameneeqwd fdifeleaat hkrplvylgl
      481 kifarfgice flncsestlr swlqvieany hssnsyhnst hsadvlhata yflskervkq
      541 tldpidevaa liaatvhdvd hpgrtnsflc nagselaily ndtavleshh aalafqlttr
      601 dgkcnifknm erneyrtlrq viidmvlate mtkhfehvnk fvnsinkpla aleengnngd
      661 gesiktvlrs penrilikrm likcadisnp crpreqciew agriseeyfa qtdeerrqgl
      721 pvvmpvfdrn tcsipksqls fidyfiidmf dawdafadlp nlmehlnnni kywkgldgrn
      781 lrvlrpppe
//
LOCUS       XP_041324688             770 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324688
VERSION     XP_041324688.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468754.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X5"
                     /calculated_mol_wt=87264
     Region          23..>100
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          159..>266
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          497..747
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..770
                     /gene="PDE8A"
                     /coded_by="XM_041468754.1:122..2434"
                     /db_xref="GeneID:121354285"
ORIGIN      
        1 msqapvtdvq fgpmrlhqdq lqvllvfaee deqsngfrwa cdkagfrcnl artpqsalec
       61 fldkhhdiii idhrhsryfd aealcrsirt tkasentvii cvvqrhtdre essilplisa
      121 gftrryvens srmacyneli qlefgqvqaq fklracnslf taleksqeai eitsedhviq
      181 yvnpafetmm gyqigeliek eltevpinek kadfldtins cikigkewqg myyakkkngd
      241 siqqnvkilp vigqggkirh yvsisrlcnd nnkvektcec iqaesqtdtq tcrhkdmrkg
      301 sldvrsttsr gsdgssqrrr ssmarvhsmt ieapitkvin iinaaqessp mpvaealdra
      361 leilrttely spqlgtkded phtsdlvggl mtdglrrlsg neyilsakqt hqvagslssp
      421 islndippri tqameneeqw dfdifeleaa thkrplvylg lkifarfgic eflncsestl
      481 rswlqviean yhssnsyhns thsadvlhat ayflskervk qtldpideva aliaatvhdv
      541 dhpgrtnsfl cnagselail yndtavlesh haalafqltt rdgkcnifkn merneyrtlr
      601 qviidmvlat emtkhfehvn kfvnsinkpl aaleengnng dgesiktvlr spenrilikr
      661 mlikcadisn pcrpreqcie wagriseeyf aqtdeerrqg lpvvmpvfdr ntcsipksql
      721 sfidyfiidm fdawdafadl pnlmehlnnn ikywkgldgr nlrvlrpppe
//
LOCUS       XP_041324689             757 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324689
VERSION     XP_041324689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468755.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..757
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X2"
                     /calculated_mol_wt=85906
     Region          10..>87
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          146..>253
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          484..734
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..757
                     /gene="PDE8A"
                     /coded_by="XM_041468755.1:1000..3273"
                     /db_xref="GeneID:121354285"
ORIGIN      
        1 mrlhqdqlqv llvfaeedeq sngfrwacdk agfrcnlart pqsalecfld khhdiiiidh
       61 rhsryfdaea lcrsirttka sentviicvv qrhtdreess ilplisagft rryvenssrm
      121 acyneliqle fgqvqaqfkl racnslftal eksqeaieit sedhviqyvn pafetmmgyq
      181 igeliekelt evpinekkad fldtinscik igkewqgmyy akkkngdsiq qnvkilpvig
      241 qggkirhyvs isrlcndnnk vektceciqa esqtdtqtcr hkdmrkgsld vrsttsrgsd
      301 gssqrrrssm arvhsmtiea pitkviniin aaqesspmpv aealdralei lrttelyspq
      361 lgtkdedpht sdlvgglmtd glrrlsgney ilsakqthqv agslsspisl ndippritqa
      421 meneeqwdfd ifeleaathk rplvylglki farfgicefl ncsestlrsw lqvieanyhs
      481 snsyhnsths advlhatayf lskervkqtl dpidevaali aatvhdvdhp grtnsflcna
      541 gselailynd tavleshhaa lafqlttrdg kcnifknmer neyrtlrqvi idmvlatemt
      601 khfehvnkfv nsinkplaal eengnngdge siktvlrspe nrilikrmli kcadisnpcr
      661 preqciewag riseeyfaqt deerrqglpv vmpvfdrntc sipksqlsfi dyfiidmfda
      721 wdafadlpnl mehlnnniky wkgldgrnlr vlrpppe
//
LOCUS       XP_041324690             757 aa            linear   VRT 06-MAY-2021
DEFINITION  high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic
            phosphodiesterase 8A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324690
VERSION     XP_041324690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468756.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..757
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..757
                     /product="high affinity cAMP-specific and IBMX-insensitive
                     3',5'-cyclic phosphodiesterase 8A isoform X2"
                     /calculated_mol_wt=85906
     Region          10..>87
                     /region_name="PleD"
                     /note="Two-component response regulator, PleD family,
                     consists of two REC domains and a diguanylate cyclase
                     (GGDEF) domain [Signal transduction mechanisms,
                     Transcription]; COG3706"
                     /db_xref="CDD:442920"
     Region          146..>253
                     /region_name="PAS"
                     /note="PAS domain [Signal transduction mechanisms];
                     COG2202"
                     /db_xref="CDD:441804"
     Region          484..734
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..757
                     /gene="PDE8A"
                     /coded_by="XM_041468756.1:373..2646"
                     /db_xref="GeneID:121354285"
ORIGIN      
        1 mrlhqdqlqv llvfaeedeq sngfrwacdk agfrcnlart pqsalecfld khhdiiiidh
       61 rhsryfdaea lcrsirttka sentviicvv qrhtdreess ilplisagft rryvenssrm
      121 acyneliqle fgqvqaqfkl racnslftal eksqeaieit sedhviqyvn pafetmmgyq
      181 igeliekelt evpinekkad fldtinscik igkewqgmyy akkkngdsiq qnvkilpvig
      241 qggkirhyvs isrlcndnnk vektceciqa esqtdtqtcr hkdmrkgsld vrsttsrgsd
      301 gssqrrrssm arvhsmtiea pitkviniin aaqesspmpv aealdralei lrttelyspq
      361 lgtkdedpht sdlvgglmtd glrrlsgney ilsakqthqv agslsspisl ndippritqa
      421 meneeqwdfd ifeleaathk rplvylglki farfgicefl ncsestlrsw lqvieanyhs
      481 snsyhnsths advlhatayf lskervkqtl dpidevaali aatvhdvdhp grtnsflcna
      541 gselailynd tavleshhaa lafqlttrdg kcnifknmer neyrtlrqvi idmvlatemt
      601 khfehvnkfv nsinkplaal eengnngdge siktvlrspe nrilikrmli kcadisnpcr
      661 preqciewag riseeyfaqt deerrqglpv vmpvfdrntc sipksqlsfi dyfiidmfda
      721 wdafadlpnl mehlnnniky wkgldgrnlr vlrpppe
//
LOCUS       XP_041324691             796 aa            linear   VRT 06-MAY-2021
DEFINITION  WASP homolog-associated protein with actin, membranes and
            microtubules isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324691
VERSION     XP_041324691.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468757.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..796
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..796
                     /product="WASP homolog-associated protein with actin,
                     membranes and microtubules isoform X1"
                     /calculated_mol_wt=89598
     Region          4..49
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          59..419
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     Region          322..>581
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..796
                     /gene="WHAMM"
                     /coded_by="XM_041468757.1:46..2436"
                     /db_xref="GeneID:121354286"
ORIGIN      
        1 mepqpdsleg wvavrdtafa epqppprlrf lvgwngaega favtchgrae aaeqapqswa
       61 glfsapalrg vhrqlsavcp rlepafpelp palpgaasgg lwavlfpgga apdeaelqel
      121 cralelylgw alelcggrvv ldalfaadrc cddeyfeslh elrgkalrgh larakealrr
      181 vlqqhksadt mvtlmkvyee edeayqdlvt matqfyqyll qpfrdmrela tlykleilks
      241 lqydnlgprr vaalqkgade wtkraesavc siqditvnyf ketvkalaam hkqmeqdeer
      301 fgkttwasal prlenlkyml aketlqhlra relclkqkrt giqklmenlg eqeenlsive
      361 eleiqyyetq lelynvqlev lkheemlliv qldtikrqik ekqdevvyyd tcenpeelkv
      421 ieqtmgqhya nlsamtmlrq ktkqletkrg tvcarraylr nkkdqceash rqrlqqaees
      481 rkrfqqhhsi qikrdkqkee ekkkkawisq erqktlerlk vfrekcpahv vlktsrpqpr
      541 spklprgipq qavvlspppa sstgaapavv spapsstvra aleqpqsill vedkepkasc
      601 qntpadipvq ifvtdgdtee qkhseevmvs pcspppppsp pppppppplp ppppppplpl
      661 qlktpsated kplplisdsp sespalhnqd dssrrcinnc igsmdevlas lkrsevhlrk
      721 veqpdpyasv kdnilsairq gvklrkvnrd terdgsrgsp nelersikaa mqrikkvsad
      781 seeeedndqn ngewds
//
LOCUS       XP_041324692             755 aa            linear   VRT 06-MAY-2021
DEFINITION  WASP homolog-associated protein with actin, membranes and
            microtubules isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324692
VERSION     XP_041324692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..755
                     /product="WASP homolog-associated protein with actin,
                     membranes and microtubules isoform X2"
                     /calculated_mol_wt=84918
     Region          <140..378
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     Region          281..>540
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..755
                     /gene="WHAMM"
                     /coded_by="XM_041468758.1:16..2283"
                     /db_xref="GeneID:121354286"
ORIGIN      
        1 melcatrpgg rspcpwqrgg naifgvtsqp nptppvpcra vpchnpvtng lsrgrpsrsf
       61 ttalfifhsr pegrpgpasv saqtpphgpa pclsrqwarv lpvtrtgsap pgarflfrsg
      121 prgrcrrcrd gaaarqpggv lqqhksadtm vtlmkvyeee deayqdlvtm atqfyqyllq
      181 pfrdmrelat lykleilksl qydnlgprrv aalqkgadew tkraesavcs iqditvnyfk
      241 etvkalaamh kqmeqdeerf gkttwasalp rlenlkymla ketlqhlrar elclkqkrtg
      301 iqklmenlge qeenlsivee leiqyyetql elynvqlevl kheemllivq ldtikrqike
      361 kqdevvyydt cenpeelkvi eqtmgqhyan lsamtmlrqk tkqletkrgt vcarraylrn
      421 kkdqceashr qrlqqaeesr krfqqhhsiq ikrdkqkeee kkkkawisqe rqktlerlkv
      481 frekcpahvv lktsrpqprs pklprgipqq avvlspppas stgaapavvs papsstvraa
      541 leqpqsillv edkepkascq ntpadipvqi fvtdgdteeq khseevmvsp cspppppspp
      601 ppppppplpp pppppplplq lktpsatedk plplisdsps espalhnqdd ssrrcinnci
      661 gsmdevlasl krsevhlrkv eqpdpyasvk dnilsairqg vklrkvnrdt erdgsrgspn
      721 elersikaam qrikkvsads eeeedndqnn gewds
//
LOCUS       XP_041324693             792 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III and SPRY domain-containing protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324693
VERSION     XP_041324693.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468759.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="fibronectin type III and SPRY domain-containing
                     protein 2"
                     /calculated_mol_wt=89105
     Region          <218..248
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          <254..412
                     /region_name="EzrA"
                     /note="Septation ring formation regulator, EzrA;
                     pfam06160"
                     /db_xref="CDD:428797"
     Region          <416..>608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          417..509
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(498..499,501..502)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          609..783
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..792
                     /gene="FSD2"
                     /coded_by="XM_041468759.1:192..2570"
                     /db_xref="GeneID:121354288"
ORIGIN      
        1 mssrsgstrd yetsgqsrhy sasppvpess dteteglify hmdlygsker fdifpeelsg
       61 rgdrslgdtr qesalssekv qrpqevgydl ekevaelakm ygldedreke lelleghlek
      121 vesrwpparp ekaglqgsiy niskssssvk dtsqstkhqg ipdeasqgen qskaraddea
      181 essiwsrggl ssggvsdewn sqavseeege eeeeeaadvf cstckipira fdklfgehkd
      241 hevaqlpsav esekeeihkn mckleeqiah menvashlee ifitveenfg rqeqnfevhy
      301 ndavqvlaqk yeeqlealge ekrqklealy eqlvscgkhl dtckeltdet qelflendka
      361 efmkaavtmv drleeflkke vdlelstlpd feeriidvse veqlmnsina ipapcapvin
      421 pqapnaatgt slrvcwglfs ddtvecyqlc yqpvsnerhs dgqaehtlkv ketyctitdl
      481 lpntqyefwv salnasgisp pseravyvta pspptiknkk irscenaalv cwesrdinpv
      541 dsytvelskl tdeenddiit esivgipnce vlihlqpaqk yhicvraqnl ggssersepv
      601 lihttgtcfy lnedtahpll ailddgftis cdelenpecd lpvydnsftr ciailgslip
      661 fpgkhyweve veedteyrig vafentprhg hlgannsswc mrhiitpsrh kyeflhsgmt
      721 pdiritvppr rigilldyen crlsffnadi aqhlhtfnsh fqhyvhpcfa letpgilrih
      781 tgittppwta lp
//
LOCUS       XP_041324694             792 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III and SPRY domain-containing protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324694
VERSION     XP_041324694.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468760.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="fibronectin type III and SPRY domain-containing
                     protein 2"
                     /calculated_mol_wt=89105
     Region          <218..248
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          <254..412
                     /region_name="EzrA"
                     /note="Septation ring formation regulator, EzrA;
                     pfam06160"
                     /db_xref="CDD:428797"
     Region          <416..>608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          417..509
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(498..499,501..502)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          609..783
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..792
                     /gene="FSD2"
                     /coded_by="XM_041468760.1:321..2699"
                     /db_xref="GeneID:121354288"
ORIGIN      
        1 mssrsgstrd yetsgqsrhy sasppvpess dteteglify hmdlygsker fdifpeelsg
       61 rgdrslgdtr qesalssekv qrpqevgydl ekevaelakm ygldedreke lelleghlek
      121 vesrwpparp ekaglqgsiy niskssssvk dtsqstkhqg ipdeasqgen qskaraddea
      181 essiwsrggl ssggvsdewn sqavseeege eeeeeaadvf cstckipira fdklfgehkd
      241 hevaqlpsav esekeeihkn mckleeqiah menvashlee ifitveenfg rqeqnfevhy
      301 ndavqvlaqk yeeqlealge ekrqklealy eqlvscgkhl dtckeltdet qelflendka
      361 efmkaavtmv drleeflkke vdlelstlpd feeriidvse veqlmnsina ipapcapvin
      421 pqapnaatgt slrvcwglfs ddtvecyqlc yqpvsnerhs dgqaehtlkv ketyctitdl
      481 lpntqyefwv salnasgisp pseravyvta pspptiknkk irscenaalv cwesrdinpv
      541 dsytvelskl tdeenddiit esivgipnce vlihlqpaqk yhicvraqnl ggssersepv
      601 lihttgtcfy lnedtahpll ailddgftis cdelenpecd lpvydnsftr ciailgslip
      661 fpgkhyweve veedteyrig vafentprhg hlgannsswc mrhiitpsrh kyeflhsgmt
      721 pdiritvppr rigilldyen crlsffnadi aqhlhtfnsh fqhyvhpcfa letpgilrih
      781 tgittppwta lp
//
LOCUS       XP_041324695             792 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III and SPRY domain-containing protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324695
VERSION     XP_041324695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="fibronectin type III and SPRY domain-containing
                     protein 2"
                     /calculated_mol_wt=89105
     Region          <218..248
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          <254..412
                     /region_name="EzrA"
                     /note="Septation ring formation regulator, EzrA;
                     pfam06160"
                     /db_xref="CDD:428797"
     Region          <416..>608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          417..509
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(498..499,501..502)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          609..783
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..792
                     /gene="FSD2"
                     /coded_by="XM_041468761.1:179..2557"
                     /db_xref="GeneID:121354288"
ORIGIN      
        1 mssrsgstrd yetsgqsrhy sasppvpess dteteglify hmdlygsker fdifpeelsg
       61 rgdrslgdtr qesalssekv qrpqevgydl ekevaelakm ygldedreke lelleghlek
      121 vesrwpparp ekaglqgsiy niskssssvk dtsqstkhqg ipdeasqgen qskaraddea
      181 essiwsrggl ssggvsdewn sqavseeege eeeeeaadvf cstckipira fdklfgehkd
      241 hevaqlpsav esekeeihkn mckleeqiah menvashlee ifitveenfg rqeqnfevhy
      301 ndavqvlaqk yeeqlealge ekrqklealy eqlvscgkhl dtckeltdet qelflendka
      361 efmkaavtmv drleeflkke vdlelstlpd feeriidvse veqlmnsina ipapcapvin
      421 pqapnaatgt slrvcwglfs ddtvecyqlc yqpvsnerhs dgqaehtlkv ketyctitdl
      481 lpntqyefwv salnasgisp pseravyvta pspptiknkk irscenaalv cwesrdinpv
      541 dsytvelskl tdeenddiit esivgipnce vlihlqpaqk yhicvraqnl ggssersepv
      601 lihttgtcfy lnedtahpll ailddgftis cdelenpecd lpvydnsftr ciailgslip
      661 fpgkhyweve veedteyrig vafentprhg hlgannsswc mrhiitpsrh kyeflhsgmt
      721 pdiritvppr rigilldyen crlsffnadi aqhlhtfnsh fqhyvhpcfa letpgilrih
      781 tgittppwta lp
//
LOCUS       XP_041324696             792 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III and SPRY domain-containing protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324696
VERSION     XP_041324696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="fibronectin type III and SPRY domain-containing
                     protein 2"
                     /calculated_mol_wt=89105
     Region          <218..248
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          <254..412
                     /region_name="EzrA"
                     /note="Septation ring formation regulator, EzrA;
                     pfam06160"
                     /db_xref="CDD:428797"
     Region          <416..>608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          417..509
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(498..499,501..502)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          609..783
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..792
                     /gene="FSD2"
                     /coded_by="XM_041468762.1:144..2522"
                     /db_xref="GeneID:121354288"
ORIGIN      
        1 mssrsgstrd yetsgqsrhy sasppvpess dteteglify hmdlygsker fdifpeelsg
       61 rgdrslgdtr qesalssekv qrpqevgydl ekevaelakm ygldedreke lelleghlek
      121 vesrwpparp ekaglqgsiy niskssssvk dtsqstkhqg ipdeasqgen qskaraddea
      181 essiwsrggl ssggvsdewn sqavseeege eeeeeaadvf cstckipira fdklfgehkd
      241 hevaqlpsav esekeeihkn mckleeqiah menvashlee ifitveenfg rqeqnfevhy
      301 ndavqvlaqk yeeqlealge ekrqklealy eqlvscgkhl dtckeltdet qelflendka
      361 efmkaavtmv drleeflkke vdlelstlpd feeriidvse veqlmnsina ipapcapvin
      421 pqapnaatgt slrvcwglfs ddtvecyqlc yqpvsnerhs dgqaehtlkv ketyctitdl
      481 lpntqyefwv salnasgisp pseravyvta pspptiknkk irscenaalv cwesrdinpv
      541 dsytvelskl tdeenddiit esivgipnce vlihlqpaqk yhicvraqnl ggssersepv
      601 lihttgtcfy lnedtahpll ailddgftis cdelenpecd lpvydnsftr ciailgslip
      661 fpgkhyweve veedteyrig vafentprhg hlgannsswc mrhiitpsrh kyeflhsgmt
      721 pdiritvppr rigilldyen crlsffnadi aqhlhtfnsh fqhyvhpcfa letpgilrih
      781 tgittppwta lp
//
LOCUS       XP_041324698             422 aa            linear   VRT 06-MAY-2021
DEFINITION  glycine amidinotransferase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324698
VERSION     XP_041324698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="glycine amidinotransferase, mitochondrial"
                     /calculated_mol_wt=47862
     Region          65..414
                     /region_name="amidinotransferase_AGAT-like"
                     /note="L-arginine:glycine amidinotransferase and similar
                     proteins; cd21136"
                     /db_xref="CDD:439148"
     Site            order(166,168..169,255,302,304..305,321,353..354,360,401,
                     405..406)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:439148"
     CDS             1..422
                     /gene="GATM"
                     /coded_by="XM_041468764.1:59..1327"
                     /db_xref="GeneID:121354289"
ORIGIN      
        1 mlrvrclrgg srgaeaahyi gsrlrgaftg wvqrtsqstq aaaasqntca addkaaspvp
       61 kdclvcsyne wdpleevivg raenacvppf svevkantye kywgfyqkfg gqgfpkdhlk
      121 kaiaeieemc nilkgegvtv krpdpidwsv kyktpdfest gmygamprdi llvvgneiie
      181 apmawrarff eyrayrrlik dyfnsgakwt tapkptmade lydqnypihs vedrhklaaq
      241 gkfvttefep cfdaadfira grdifvqrsq vtnhmgiewm rrhlapeyrv hiisfkdpnp
      301 mhidatfnii gpglvlsnpd rpchqielfk kagwtviqpp vplipddhpl wmsskwlsmn
      361 vlmldekrvm vdanetsiqk mfeklgistv kvnirhansl gggfhcwtcd irrrgtlqsy
      421 fd
//
LOCUS       XP_041324699             988 aa            linear   VRT 06-MAY-2021
DEFINITION  little elongation complex subunit 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324699
VERSION     XP_041324699.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468765.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..988
                     /product="little elongation complex subunit 2 isoform X1"
                     /calculated_mol_wt=109903
     Region          706..916
                     /region_name="NARG2_C"
                     /note="NMDA receptor-regulated gene protein 2 C-terminus;
                     pfam10505"
                     /db_xref="CDD:463121"
     CDS             1..988
                     /gene="ICE2"
                     /coded_by="XM_041468765.1:59..3025"
                     /db_xref="GeneID:121354290"
ORIGIN      
        1 maaagppltw dippkngqev ffshelyekh slslslselw hlsnreakkn aealanssen
       61 kqacslqaae sleveakspa ddhplpeprl pypftsclte keqktylylm tkfskkrnhf
      121 qvneasqref ftymqmkevv nneiaefmkf aqnaakscaq dydaisedal ryteellrar
      181 ighvqkypef ytlqeimsim ggkfhtqltf kleknllamg tarrgktdfp smpvqlptdy
      241 stvtsiitpe krahvmhhdi ssdsnaekla lkycpqvvls dqslftllnn hglnykeqwe
      301 ipvcvkmitv agskpakvvy vdppllrkem tvrernqifh eipmdflatk tsyvpisnvs
      361 mdkpaednll qwdvcsdtyq crtipppddt gmdfdddvte letfgattkl srtckmettf
      421 ptssntanvl shglkmggkn ssainrgdee ekttlseqeg sarasvqlps ldgipccspq
      481 ehspcksfqs vevglskaqd vmtkevldse ttlnvlpvav ssekepdaaq kketysslcg
      541 sdtdeerlvi dsdcettaac kpavpttvss tsaetarspc ptqspsasit dcsdttdqgk
      601 kaskkpprkl skeldpvgqi lkmqtellks psrkahepll scgisngvpa qlpqspktlv
      661 tsstetvpap asnptgssrn twtwlfegmp ktklpselql leedpseyqa peegnvvykl
      721 fslndllllv rcsvqkvksl pqyqkkkkaq kpipifllpk lgyqayygve altesevcql
      781 wtqsmlhskc ffyighidaf tsklimleki spatlreklg likpanslni lhhvlkkvsd
      841 leegsyllth aagdssvaiy kssldkstrs synlhkahcd lpavpatlsv pwvpldpslp
      901 lpyhivhgrv pctfppapwe gwkqkmagvk gqwdtphegr pvametkgnp akparnegva
      961 pkklrknfck qrkvkkkwkt kfnkmqlk
//
LOCUS       XP_041324700             879 aa            linear   VRT 06-MAY-2021
DEFINITION  little elongation complex subunit 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324700
VERSION     XP_041324700.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468766.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="little elongation complex subunit 2 isoform X2"
                     /calculated_mol_wt=97709
     Region          597..807
                     /region_name="NARG2_C"
                     /note="NMDA receptor-regulated gene protein 2 C-terminus;
                     pfam10505"
                     /db_xref="CDD:463121"
     CDS             1..879
                     /gene="ICE2"
                     /coded_by="XM_041468766.1:314..2953"
                     /db_xref="GeneID:121354290"
ORIGIN      
        1 mtkfskkrnh fqvneasqre fftymqmkev vnneiaefmk faqnaaksca qdydaiseda
       61 lryteellra righvqkype fytlqeimsi mggkfhtqlt fkleknllam gtarrgktdf
      121 psmpvqlptd ystvtsiitp ekrahvmhhd issdsnaekl alkycpqvvl sdqslftlln
      181 nhglnykeqw eipvcvkmit vagskpakvv yvdppllrke mtvrernqif heipmdflat
      241 ktsyvpisnv smdkpaednl lqwdvcsdty qcrtipppdd tgmdfdddvt eletfgattk
      301 lsrtckmett fptssntanv lshglkmggk nssainrgde eekttlseqe gsarasvqlp
      361 sldgipccsp qehspcksfq svevglskaq dvmtkevlds ettlnvlpva vssekepdaa
      421 qkketysslc gsdtdeerlv idsdcettaa ckpavpttvs stsaetarsp cptqspsasi
      481 tdcsdttdqg kkaskkpprk lskeldpvgq ilkmqtellk spsrkahepl lscgisngvp
      541 aqlpqspktl vtsstetvpa pasnptgssr ntwtwlfegm pktklpselq lleedpseyq
      601 apeegnvvyk lfslndllll vrcsvqkvks lpqyqkkkka qkpipifllp klgyqayygv
      661 ealtesevcq lwtqsmlhsk cffyighida ftsklimlek ispatlrekl glikpansln
      721 ilhhvlkkvs dleegsyllt haagdssvai ykssldkstr ssynlhkahc dlpavpatls
      781 vpwvpldpsl plpyhivhgr vpctfppapw egwkqkmagv kgqwdtpheg rpvametkgn
      841 pakparnegv apkklrknfc kqrkvkkkwk tkfnkmqlk
//
LOCUS       XP_041324701             879 aa            linear   VRT 06-MAY-2021
DEFINITION  little elongation complex subunit 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324701
VERSION     XP_041324701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468767.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..879
                     /product="little elongation complex subunit 2 isoform X2"
                     /calculated_mol_wt=97709
     Region          597..807
                     /region_name="NARG2_C"
                     /note="NMDA receptor-regulated gene protein 2 C-terminus;
                     pfam10505"
                     /db_xref="CDD:463121"
     CDS             1..879
                     /gene="ICE2"
                     /coded_by="XM_041468767.1:318..2957"
                     /db_xref="GeneID:121354290"
ORIGIN      
        1 mtkfskkrnh fqvneasqre fftymqmkev vnneiaefmk faqnaaksca qdydaiseda
       61 lryteellra righvqkype fytlqeimsi mggkfhtqlt fkleknllam gtarrgktdf
      121 psmpvqlptd ystvtsiitp ekrahvmhhd issdsnaekl alkycpqvvl sdqslftlln
      181 nhglnykeqw eipvcvkmit vagskpakvv yvdppllrke mtvrernqif heipmdflat
      241 ktsyvpisnv smdkpaednl lqwdvcsdty qcrtipppdd tgmdfdddvt eletfgattk
      301 lsrtckmett fptssntanv lshglkmggk nssainrgde eekttlseqe gsarasvqlp
      361 sldgipccsp qehspcksfq svevglskaq dvmtkevlds ettlnvlpva vssekepdaa
      421 qkketysslc gsdtdeerlv idsdcettaa ckpavpttvs stsaetarsp cptqspsasi
      481 tdcsdttdqg kkaskkpprk lskeldpvgq ilkmqtellk spsrkahepl lscgisngvp
      541 aqlpqspktl vtsstetvpa pasnptgssr ntwtwlfegm pktklpselq lleedpseyq
      601 apeegnvvyk lfslndllll vrcsvqkvks lpqyqkkkka qkpipifllp klgyqayygv
      661 ealtesevcq lwtqsmlhsk cffyighida ftsklimlek ispatlrekl glikpansln
      721 ilhhvlkkvs dleegsyllt haagdssvai ykssldkstr ssynlhkahc dlpavpatls
      781 vpwvpldpsl plpyhivhgr vpctfppapw egwkqkmagv kgqwdtpheg rpvametkgn
      841 pakparnegv apkklrknfc kqrkvkkkwk tkfnkmqlk
//
LOCUS       XP_041324702             525 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor ROR-alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324702
VERSION     XP_041324702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..525
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..525
                     /product="nuclear receptor ROR-alpha isoform X1"
                     /calculated_mol_wt=59049
     Region          68..162
                     /region_name="NR_DBD_ROR"
                     /note="DNA-binding domain of Retinoid-related orphan
                     receptors (RORs) is composed of two C4-type zinc fingers;
                     cd06968"
                     /db_xref="CDD:143526"
     Site            order(75,78,92,95,111,117,127,130)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143526"
     Site            order(85..87,93..94,96,98,101,104,124..125,128,131,142,
                     145)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143526"
     Region          274..513
                     /region_name="NR_LBD_ROR_like"
                     /note="The ligand binding domain of Retinoid-related
                     orphan receptors, of the nuclear receptor superfamily;
                     cd06939"
                     /db_xref="CDD:132737"
     Site            order(290..292,322,325..326,328..329,332,366,369..370,
                     372..373,381..383,393,396,405,486)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132737"
     Site            order(341,351,354..355,358..359,507..508,511..512)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132737"
     CDS             1..525
                     /gene="RORA"
                     /coded_by="XM_041468768.1:111..1688"
                     /db_xref="GeneID:121354291"
ORIGIN      
        1 mesapaapdp aasepgssvs eaaagardtp vnleparksd apapvrrqsy ssssssrgis
       61 vtkkthtsqi eiipckicgd kssgihygvi tcegckgffr rsqqsnatys cprqknclid
      121 rtsrnrcqhc rlqkclavgm srdavkfgrm skkqrdslya evqkhrmqqq qrdhqqqpge
      181 aepltptyni ttngltelhd dlsnyidght pegskadsav ssfyldiqps pdqsglding
      241 ikpepicdyt pasgffpycs ftngetsptv smaelehlaq niskshmetc qylreelqqi
      301 twqtflqeei enyqnkqrev mwqlcavkit eaiqyvvefa kridgfmelc qndqivllka
      361 gslevvfirm crafdsqnnt vyfdgkyasp evfkslgced fisfvfefgk slcsmhlted
      421 eialfsafvl msadrswlqe kvkieklqqk iqlalqhvlq knhredgilt klickvstlr
      481 alcgrhtekl mafkaiypdi vrlhfpplyk elftsefepa mqidg
//
LOCUS       XP_041324703             468 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor ROR-alpha isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324703
VERSION     XP_041324703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="nuclear receptor ROR-alpha isoform X2"
                     /calculated_mol_wt=53363
     Region          11..105
                     /region_name="NR_DBD_ROR"
                     /note="DNA-binding domain of Retinoid-related orphan
                     receptors (RORs) is composed of two C4-type zinc fingers;
                     cd06968"
                     /db_xref="CDD:143526"
     Site            order(18,21,35,38,54,60,70,73)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143526"
     Site            order(28..30,36..37,39,41,44,47,67..68,71,74,85,88)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143526"
     Region          217..456
                     /region_name="NR_LBD_ROR_like"
                     /note="The ligand binding domain of Retinoid-related
                     orphan receptors, of the nuclear receptor superfamily;
                     cd06939"
                     /db_xref="CDD:132737"
     Site            order(233..235,265,268..269,271..272,275,309,312..313,
                     315..316,324..326,336,339,348,429)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132737"
     Site            order(284,294,297..298,301..302,450..451,454..455)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132737"
     CDS             1..468
                     /gene="RORA"
                     /coded_by="XM_041468769.1:225..1631"
                     /db_xref="GeneID:121354291"
ORIGIN      
        1 mmcvvlaamk aqieiipcki cgdkssgihy gvitcegckg ffrrsqqsna tyscprqknc
       61 lidrtsrnrc qhcrlqkcla vgmsrdavkf grmskkqrds lyaevqkhrm qqqqrdhqqq
      121 pgeaepltpt ynittnglte lhddlsnyid ghtpegskad savssfyldi qpspdqsgld
      181 ingikpepic dytpasgffp ycsftngets ptvsmaeleh laqniskshm etcqylreel
      241 qqitwqtflq eeienyqnkq revmwqlcav kiteaiqyvv efakridgfm elcqndqivl
      301 lkagslevvf irmcrafdsq nntvyfdgky aspevfkslg cedfisfvfe fgkslcsmhl
      361 tedeialfsa fvlmsadrsw lqekvkiekl qqkiqlalqh vlqknhredg iltklickvs
      421 tlralcgrht eklmafkaiy pdivrlhfpp lykelftsef epamqidg
//
LOCUS       XP_041324704             462 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor ROR-alpha isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324704
VERSION     XP_041324704.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468770.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..462
                     /product="nuclear receptor ROR-alpha isoform X3"
                     /calculated_mol_wt=52415
     Region          68..162
                     /region_name="NR_DBD_ROR"
                     /note="DNA-binding domain of Retinoid-related orphan
                     receptors (RORs) is composed of two C4-type zinc fingers;
                     cd06968"
                     /db_xref="CDD:143526"
     Site            order(75,78,92,95,111,117,127,130)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143526"
     Site            order(85..87,93..94,96,98,101,104,124..125,128,131,142,
                     145)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143526"
     Region          213..450
                     /region_name="NR_LBD_ROR_like"
                     /note="The ligand binding domain of Retinoid-related
                     orphan receptors, of the nuclear receptor superfamily;
                     cd06939"
                     /db_xref="CDD:132737"
     Site            order(227..229,259,262..263,265..266,269,303,306..307,
                     309..310,318..320,330,333,342,423)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132737"
     Site            order(278,288,291..292,295..296,444..445,448..449)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132737"
     CDS             1..462
                     /gene="RORA"
                     /coded_by="XM_041468770.1:111..1499"
                     /db_xref="GeneID:121354291"
ORIGIN      
        1 mesapaapdp aasepgssvs eaaagardtp vnleparksd apapvrrqsy ssssssrgis
       61 vtkkthtsqi eiipckicgd kssgihygvi tcegckgffr rsqqsnatys cprqknclid
      121 rtsrnrcqhc rlqkclavgm srdavkfgrm skkqrdslya evqkhrmqqq qrdhqqqpge
      181 aepltptyni ttngltelhd dlsnyidght peehlaqnis kshmetcqyl reelqqitwq
      241 tflqeeieny qnkqrevmwq lcavkiteai qyvvefakri dgfmelcqnd qivllkagsl
      301 evvfirmcra fdsqnntvyf dgkyaspevf kslgcedfis fvfefgkslc smhltedeia
      361 lfsafvlmsa drswlqekvk ieklqqkiql alqhvlqknh redgiltkli ckvstlralc
      421 grhteklmaf kaiypdivrl hfpplykelf tsefepamqi dg
//
LOCUS       XP_041324705             343 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324705
VERSION     XP_041324705.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468771.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="BTB/POZ domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=38284
     Region          <1..74
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          126..257
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..343
                     /gene="BTBD1"
                     /coded_by="XM_041468771.1:206..1237"
                     /db_xref="GeneID:121354293"
ORIGIN      
        1 mdaisaegft dididtlcav lerdtlsire srlfgavvrw aeaecqrqql avtfenkqkv
       61 lgralslirf plmtieefaa gpaqsgilsd revvnlflhf tvnpkpkvdy idrprcclrg
      121 kecsinrfqq vesrwgysgt sdrirftvnr risivgfgly gsihgptdyq vniqiidyek
      181 nqtlgqndtg fscdgtastf rvmfkepiei lptvcytaca tlkgpdshyg tkglkkvihe
      241 sptasktcfv fysspdskaa avvpvpscts fqndlgltlw twiatvffgs tsaklhsych
      301 nldffqepwr inelctaeni cssteeiniq snsarnrsfp nls
//
LOCUS       XP_041324706             376 aa            linear   VRT 06-MAY-2021
DEFINITION  BTB/POZ domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324706
VERSION     XP_041324706.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468772.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..376
                     /product="BTB/POZ domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=41790
     Region          <1..73
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          69..175
                     /region_name="BACK"
                     /note="BACK (BTB and C-terminal Kelch) domain; cl28903"
                     /db_xref="CDD:475122"
     Region          227..375
                     /region_name="PHR"
                     /note="PHR domain; pfam08005"
                     /db_xref="CDD:462339"
     CDS             1..376
                     /gene="BTBD1"
                     /coded_by="XM_041468772.1:286..1416"
                     /db_xref="GeneID:121354293"
ORIGIN      
        1 mfnggmatts aeielpdvep aaflallrfl ysdevqigpe tvmttlytak kyavpaleah
       61 cvdfltkhlr adnafmlltq arlfdepqla slcldtidks tmdaisaegf tdididtlca
      121 vlerdtlsir esrlfgavvr waeaecqrqq lavtfenkqk vlgralslir fplmtieefa
      181 agpaqsgils drevvnlflh ftvnpkpkvd yidrprcclr gkecsinrfq qvesrwgysg
      241 tsdrirftvn rrisivgfgl ygsihgptdy qvniqiidye knqtlgqndt gfscdgtast
      301 frvmfkepie ilptvcytac atlkgpdshy gtkglkkvih esptasktcf vfysspgnnn
      361 gtsiedgqip eiifyt
//
LOCUS       XP_041324707             202 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0235 protein C15orf40 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324707
VERSION     XP_041324707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..202
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..202
                     /product="UPF0235 protein C15orf40 homolog isoform X1"
                     /calculated_mol_wt=20124
     Region          <1..>152
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          112..184
                     /region_name="DUF167"
                     /note="Uncharacterized ACR, YggU family COG1872;
                     pfam02594"
                     /db_xref="CDD:460608"
     CDS             1..202
                     /gene="CUNH15orf40"
                     /coded_by="XM_041468773.1:150..758"
                     /db_xref="GeneID:121354295"
ORIGIN      
        1 mglgravreq plraqgravg eqplraqgra vpeeplraqg ravrsaqapr ggpgavagra
       61 apvmpslagf lrvraapvri ggampgkgka aakgpaepga aagpvvaagg gsvrvavrak
      121 pgarcsavtd vtaeavgvai aappsegean aelcrylakv levkksdvil ekggksrdkv
      181 vkisasatpd eileklkkea ss
//
LOCUS       XP_041324708             171 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0235 protein C15orf40 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324708
VERSION     XP_041324708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..171
                     /product="UPF0235 protein C15orf40 homolog isoform X2"
                     /calculated_mol_wt=16951
     CDS             1..171
                     /gene="CUNH15orf40"
                     /coded_by="XM_041468774.1:150..665"
                     /db_xref="GeneID:121354295"
ORIGIN      
        1 mglgravreq plraqgravg eqplraqgra vpeeplraqg ravrsaqapr ggpgavagra
       61 apvmpslagf lrvraapvri ggampgkgka aakgpaepga aagpvvaagg gsvrvavrak
      121 pgarcsavta lalllhalgl lshppcvdah glwqcpgpag iywefpnsvt l
//
LOCUS       XP_041324710            2542 aa            linear   VRT 06-MAY-2021
DEFINITION  talin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324710
VERSION     XP_041324710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468776.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2542
                     /product="talin-2 isoform X1"
                     /calculated_mol_wt=271564
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..655
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          602..>761
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     Region          1045..>1174
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1060,1067..1068,1071,1074..1075,1155..1156,1159,
                     1162..1163)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1656..1827
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1671,1678..1679,1682,1685..1686,1765..1766,1769,
                     1772..1773,1803,1810)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1850..1974
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2012..2135
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2337..2532
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2542
                     /gene="TLN2"
                     /coded_by="XM_041468776.1:266..7894"
                     /db_xref="GeneID:121354296"
ORIGIN      
        1 mvalslkicv rqcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdddprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqesieekk eestgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eytkqrgaek rifqehkncg emteieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgvtkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kptilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgi mpspqqqvtt
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqadlsevd nlpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpvd tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llkaartlas avsdllkavq ptsgeprqtv ltaagsigqa sgellrqige
      661 netderfqdv lmslakavan aaamlvlkak nvaqvaedtv lqnrviaaat qcalstsqlv
      721 acakvvspti sspvcqeqli eagklvdrsv encvracqaa tddsellkqv saaasivsqa
      781 lndllqhvrq fasrgepigr ydqatdtimc vtesifssmg dagemvrqar vlaqatsdlv
      841 namrsdaeae idmenskkll aaaklladst armveaakga aanpenedqq qrlreaaegl
      901 rvatnaaaqn aikkkivnrl eiaakqaaaa atqtiaasqn aavsnkntaa hqqlvqsckn
      961 vadhipqlvq gvrgsqaqae dlsaqlalin ssqnflqpgs kmvasakaav ptvtdqaaam
     1021 qlsqcaknla tslaelrtas qkaheacgpm eidsalntvq tlknelqdak maavdgqlkp
     1081 lpgetlekct qdlgstskav gssmaqlltc aaqgnehytg vaaretaqal ktlaqaargv
     1141 aastsdpvaa hamldsarnv megsamliqe akqalaapgd adsqqrlaqv akavshslnn
     1201 cvnclpgqkd vdvalksige sskkllvdsl ppssksfqea qselnqaaad lnqsagevvh
     1261 atrgqsgela aasgkfsddf defldagiem agqaqtkedq iqvignlksi smasskllla
     1321 akslsvdpga pnaknllaaa aravtesinq litlctqqap gqkecdnalr eletvkgmld
     1381 npnepvsdls yfdciegvme nskvlgesma gisqnaktgd llvfgecvgv askalcglte
     1441 aaaqaaylvg isdpnsqagq qglvdpiqfa ranqaiqmac qnlvdpassp sqvlsaativ
     1501 akhtsalcna criassktan pvakrhfvqs akevanstan lvktikaldg dfseenrnkc
     1561 riatapliea venltafasn pefvsipaqi stegsqaqep ilisartmle ssslliktar
     1621 slainpkdpp twsvlaghsh tvsdsiksli tsirdkapgq recdfsidgi nrcirdieqa
     1681 slaavsqsla trddisveal qeqltsvvqe ighlidpiat aargeaaqlg hkvtqlasyf
     1741 eplvlaavgv asktlnhqqq mtildqsktl aesalqilya akegggnpka shthdaitea
     1801 aqlmkeavdd imvtlneaas evgmvggmvd siaeamtkld egtppdpkgt fvdyqttvvk
     1861 yskaiavtaq emmtksvtnp eelgglasqm tndyghlalq grmaaataep eeigfqirtr
     1921 vqelghgcif lvqkagalqi cptdsytkre liecaravte kvslvlsalq agnkgtqaci
     1981 taasavsgii adldttimfa tagtlnaenn esfadhreni lktakalved tkllvsgaas
     2041 sqdklaqaaq ssantitqla evvklgaasl gsddpetqvv linaikdvak alsdligatk
     2101 gaaskpaddp smyqlkgaak vmvtnvtsll ktvkavedea trgtraleat ieyikqeltv
     2161 fqssevpekt sspeesirmt kgitmataka vaagnscrqe dviatanlsr kavadmltac
     2221 kqasyhpdvs eevreralrf gtectlgyle llehvllilq katpelkhql asfskrvana
     2281 vteliqsaea mkgtewvdpe dptviaetel lgaaasieaa akkleqlkpr akpkqadetl
     2341 dfeeqileaa ksiaaatsal vksasaaqre lvaqgkvgai panaaddgqw sqglisaarm
     2401 vaaatsnlce aanasvqgha seeklissak qvaastaqll vackvkadhd seamrrlqaa
     2461 gnavkrasdn lvraaqkaaf gkaedddvvv ktkfvggiaq iiaaqeemlk kereleeark
     2521 klaqirqqqy kflptelred eg
//
LOCUS       XP_041324711            2542 aa            linear   VRT 06-MAY-2021
DEFINITION  talin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324711
VERSION     XP_041324711.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468777.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2542
                     /product="talin-2 isoform X1"
                     /calculated_mol_wt=271564
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..655
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          602..>761
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     Region          1045..>1174
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1060,1067..1068,1071,1074..1075,1155..1156,1159,
                     1162..1163)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1656..1827
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1671,1678..1679,1682,1685..1686,1765..1766,1769,
                     1772..1773,1803,1810)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1850..1974
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2012..2135
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2337..2532
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2542
                     /gene="TLN2"
                     /coded_by="XM_041468777.1:376..8004"
                     /db_xref="GeneID:121354296"
ORIGIN      
        1 mvalslkicv rqcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdddprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqesieekk eestgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eytkqrgaek rifqehkncg emteieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgvtkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kptilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgi mpspqqqvtt
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqadlsevd nlpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpvd tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llkaartlas avsdllkavq ptsgeprqtv ltaagsigqa sgellrqige
      661 netderfqdv lmslakavan aaamlvlkak nvaqvaedtv lqnrviaaat qcalstsqlv
      721 acakvvspti sspvcqeqli eagklvdrsv encvracqaa tddsellkqv saaasivsqa
      781 lndllqhvrq fasrgepigr ydqatdtimc vtesifssmg dagemvrqar vlaqatsdlv
      841 namrsdaeae idmenskkll aaaklladst armveaakga aanpenedqq qrlreaaegl
      901 rvatnaaaqn aikkkivnrl eiaakqaaaa atqtiaasqn aavsnkntaa hqqlvqsckn
      961 vadhipqlvq gvrgsqaqae dlsaqlalin ssqnflqpgs kmvasakaav ptvtdqaaam
     1021 qlsqcaknla tslaelrtas qkaheacgpm eidsalntvq tlknelqdak maavdgqlkp
     1081 lpgetlekct qdlgstskav gssmaqlltc aaqgnehytg vaaretaqal ktlaqaargv
     1141 aastsdpvaa hamldsarnv megsamliqe akqalaapgd adsqqrlaqv akavshslnn
     1201 cvnclpgqkd vdvalksige sskkllvdsl ppssksfqea qselnqaaad lnqsagevvh
     1261 atrgqsgela aasgkfsddf defldagiem agqaqtkedq iqvignlksi smasskllla
     1321 akslsvdpga pnaknllaaa aravtesinq litlctqqap gqkecdnalr eletvkgmld
     1381 npnepvsdls yfdciegvme nskvlgesma gisqnaktgd llvfgecvgv askalcglte
     1441 aaaqaaylvg isdpnsqagq qglvdpiqfa ranqaiqmac qnlvdpassp sqvlsaativ
     1501 akhtsalcna criassktan pvakrhfvqs akevanstan lvktikaldg dfseenrnkc
     1561 riatapliea venltafasn pefvsipaqi stegsqaqep ilisartmle ssslliktar
     1621 slainpkdpp twsvlaghsh tvsdsiksli tsirdkapgq recdfsidgi nrcirdieqa
     1681 slaavsqsla trddisveal qeqltsvvqe ighlidpiat aargeaaqlg hkvtqlasyf
     1741 eplvlaavgv asktlnhqqq mtildqsktl aesalqilya akegggnpka shthdaitea
     1801 aqlmkeavdd imvtlneaas evgmvggmvd siaeamtkld egtppdpkgt fvdyqttvvk
     1861 yskaiavtaq emmtksvtnp eelgglasqm tndyghlalq grmaaataep eeigfqirtr
     1921 vqelghgcif lvqkagalqi cptdsytkre liecaravte kvslvlsalq agnkgtqaci
     1981 taasavsgii adldttimfa tagtlnaenn esfadhreni lktakalved tkllvsgaas
     2041 sqdklaqaaq ssantitqla evvklgaasl gsddpetqvv linaikdvak alsdligatk
     2101 gaaskpaddp smyqlkgaak vmvtnvtsll ktvkavedea trgtraleat ieyikqeltv
     2161 fqssevpekt sspeesirmt kgitmataka vaagnscrqe dviatanlsr kavadmltac
     2221 kqasyhpdvs eevreralrf gtectlgyle llehvllilq katpelkhql asfskrvana
     2281 vteliqsaea mkgtewvdpe dptviaetel lgaaasieaa akkleqlkpr akpkqadetl
     2341 dfeeqileaa ksiaaatsal vksasaaqre lvaqgkvgai panaaddgqw sqglisaarm
     2401 vaaatsnlce aanasvqgha seeklissak qvaastaqll vackvkadhd seamrrlqaa
     2461 gnavkrasdn lvraaqkaaf gkaedddvvv ktkfvggiaq iiaaqeemlk kereleeark
     2521 klaqirqqqy kflptelred eg
//
LOCUS       XP_041324712            2542 aa            linear   VRT 06-MAY-2021
DEFINITION  talin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324712
VERSION     XP_041324712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2542
                     /product="talin-2 isoform X1"
                     /calculated_mol_wt=271564
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..655
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          602..>761
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     Region          1045..>1174
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1060,1067..1068,1071,1074..1075,1155..1156,1159,
                     1162..1163)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1656..1827
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1671,1678..1679,1682,1685..1686,1765..1766,1769,
                     1772..1773,1803,1810)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1850..1974
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2012..2135
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2337..2532
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2542
                     /gene="TLN2"
                     /coded_by="XM_041468778.1:237..7865"
                     /db_xref="GeneID:121354296"
ORIGIN      
        1 mvalslkicv rqcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdddprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqesieekk eestgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eytkqrgaek rifqehkncg emteieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgvtkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kptilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgi mpspqqqvtt
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqadlsevd nlpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpvd tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llkaartlas avsdllkavq ptsgeprqtv ltaagsigqa sgellrqige
      661 netderfqdv lmslakavan aaamlvlkak nvaqvaedtv lqnrviaaat qcalstsqlv
      721 acakvvspti sspvcqeqli eagklvdrsv encvracqaa tddsellkqv saaasivsqa
      781 lndllqhvrq fasrgepigr ydqatdtimc vtesifssmg dagemvrqar vlaqatsdlv
      841 namrsdaeae idmenskkll aaaklladst armveaakga aanpenedqq qrlreaaegl
      901 rvatnaaaqn aikkkivnrl eiaakqaaaa atqtiaasqn aavsnkntaa hqqlvqsckn
      961 vadhipqlvq gvrgsqaqae dlsaqlalin ssqnflqpgs kmvasakaav ptvtdqaaam
     1021 qlsqcaknla tslaelrtas qkaheacgpm eidsalntvq tlknelqdak maavdgqlkp
     1081 lpgetlekct qdlgstskav gssmaqlltc aaqgnehytg vaaretaqal ktlaqaargv
     1141 aastsdpvaa hamldsarnv megsamliqe akqalaapgd adsqqrlaqv akavshslnn
     1201 cvnclpgqkd vdvalksige sskkllvdsl ppssksfqea qselnqaaad lnqsagevvh
     1261 atrgqsgela aasgkfsddf defldagiem agqaqtkedq iqvignlksi smasskllla
     1321 akslsvdpga pnaknllaaa aravtesinq litlctqqap gqkecdnalr eletvkgmld
     1381 npnepvsdls yfdciegvme nskvlgesma gisqnaktgd llvfgecvgv askalcglte
     1441 aaaqaaylvg isdpnsqagq qglvdpiqfa ranqaiqmac qnlvdpassp sqvlsaativ
     1501 akhtsalcna criassktan pvakrhfvqs akevanstan lvktikaldg dfseenrnkc
     1561 riatapliea venltafasn pefvsipaqi stegsqaqep ilisartmle ssslliktar
     1621 slainpkdpp twsvlaghsh tvsdsiksli tsirdkapgq recdfsidgi nrcirdieqa
     1681 slaavsqsla trddisveal qeqltsvvqe ighlidpiat aargeaaqlg hkvtqlasyf
     1741 eplvlaavgv asktlnhqqq mtildqsktl aesalqilya akegggnpka shthdaitea
     1801 aqlmkeavdd imvtlneaas evgmvggmvd siaeamtkld egtppdpkgt fvdyqttvvk
     1861 yskaiavtaq emmtksvtnp eelgglasqm tndyghlalq grmaaataep eeigfqirtr
     1921 vqelghgcif lvqkagalqi cptdsytkre liecaravte kvslvlsalq agnkgtqaci
     1981 taasavsgii adldttimfa tagtlnaenn esfadhreni lktakalved tkllvsgaas
     2041 sqdklaqaaq ssantitqla evvklgaasl gsddpetqvv linaikdvak alsdligatk
     2101 gaaskpaddp smyqlkgaak vmvtnvtsll ktvkavedea trgtraleat ieyikqeltv
     2161 fqssevpekt sspeesirmt kgitmataka vaagnscrqe dviatanlsr kavadmltac
     2221 kqasyhpdvs eevreralrf gtectlgyle llehvllilq katpelkhql asfskrvana
     2281 vteliqsaea mkgtewvdpe dptviaetel lgaaasieaa akkleqlkpr akpkqadetl
     2341 dfeeqileaa ksiaaatsal vksasaaqre lvaqgkvgai panaaddgqw sqglisaarm
     2401 vaaatsnlce aanasvqgha seeklissak qvaastaqll vackvkadhd seamrrlqaa
     2461 gnavkrasdn lvraaqkaaf gkaedddvvv ktkfvggiaq iiaaqeemlk kereleeark
     2521 klaqirqqqy kflptelred eg
//
LOCUS       XP_041324713            2542 aa            linear   VRT 06-MAY-2021
DEFINITION  talin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324713
VERSION     XP_041324713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468779.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2542
                     /product="talin-2 isoform X1"
                     /calculated_mol_wt=271564
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..655
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          602..>761
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     Region          1045..>1174
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1060,1067..1068,1071,1074..1075,1155..1156,1159,
                     1162..1163)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1656..1827
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1671,1678..1679,1682,1685..1686,1765..1766,1769,
                     1772..1773,1803,1810)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1850..1974
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2012..2135
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2337..2532
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2542
                     /gene="TLN2"
                     /coded_by="XM_041468779.1:650..8278"
                     /db_xref="GeneID:121354296"
ORIGIN      
        1 mvalslkicv rqcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdddprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqesieekk eestgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eytkqrgaek rifqehkncg emteieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgvtkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kptilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgi mpspqqqvtt
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqadlsevd nlpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpvd tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llkaartlas avsdllkavq ptsgeprqtv ltaagsigqa sgellrqige
      661 netderfqdv lmslakavan aaamlvlkak nvaqvaedtv lqnrviaaat qcalstsqlv
      721 acakvvspti sspvcqeqli eagklvdrsv encvracqaa tddsellkqv saaasivsqa
      781 lndllqhvrq fasrgepigr ydqatdtimc vtesifssmg dagemvrqar vlaqatsdlv
      841 namrsdaeae idmenskkll aaaklladst armveaakga aanpenedqq qrlreaaegl
      901 rvatnaaaqn aikkkivnrl eiaakqaaaa atqtiaasqn aavsnkntaa hqqlvqsckn
      961 vadhipqlvq gvrgsqaqae dlsaqlalin ssqnflqpgs kmvasakaav ptvtdqaaam
     1021 qlsqcaknla tslaelrtas qkaheacgpm eidsalntvq tlknelqdak maavdgqlkp
     1081 lpgetlekct qdlgstskav gssmaqlltc aaqgnehytg vaaretaqal ktlaqaargv
     1141 aastsdpvaa hamldsarnv megsamliqe akqalaapgd adsqqrlaqv akavshslnn
     1201 cvnclpgqkd vdvalksige sskkllvdsl ppssksfqea qselnqaaad lnqsagevvh
     1261 atrgqsgela aasgkfsddf defldagiem agqaqtkedq iqvignlksi smasskllla
     1321 akslsvdpga pnaknllaaa aravtesinq litlctqqap gqkecdnalr eletvkgmld
     1381 npnepvsdls yfdciegvme nskvlgesma gisqnaktgd llvfgecvgv askalcglte
     1441 aaaqaaylvg isdpnsqagq qglvdpiqfa ranqaiqmac qnlvdpassp sqvlsaativ
     1501 akhtsalcna criassktan pvakrhfvqs akevanstan lvktikaldg dfseenrnkc
     1561 riatapliea venltafasn pefvsipaqi stegsqaqep ilisartmle ssslliktar
     1621 slainpkdpp twsvlaghsh tvsdsiksli tsirdkapgq recdfsidgi nrcirdieqa
     1681 slaavsqsla trddisveal qeqltsvvqe ighlidpiat aargeaaqlg hkvtqlasyf
     1741 eplvlaavgv asktlnhqqq mtildqsktl aesalqilya akegggnpka shthdaitea
     1801 aqlmkeavdd imvtlneaas evgmvggmvd siaeamtkld egtppdpkgt fvdyqttvvk
     1861 yskaiavtaq emmtksvtnp eelgglasqm tndyghlalq grmaaataep eeigfqirtr
     1921 vqelghgcif lvqkagalqi cptdsytkre liecaravte kvslvlsalq agnkgtqaci
     1981 taasavsgii adldttimfa tagtlnaenn esfadhreni lktakalved tkllvsgaas
     2041 sqdklaqaaq ssantitqla evvklgaasl gsddpetqvv linaikdvak alsdligatk
     2101 gaaskpaddp smyqlkgaak vmvtnvtsll ktvkavedea trgtraleat ieyikqeltv
     2161 fqssevpekt sspeesirmt kgitmataka vaagnscrqe dviatanlsr kavadmltac
     2221 kqasyhpdvs eevreralrf gtectlgyle llehvllilq katpelkhql asfskrvana
     2281 vteliqsaea mkgtewvdpe dptviaetel lgaaasieaa akkleqlkpr akpkqadetl
     2341 dfeeqileaa ksiaaatsal vksasaaqre lvaqgkvgai panaaddgqw sqglisaarm
     2401 vaaatsnlce aanasvqgha seeklissak qvaastaqll vackvkadhd seamrrlqaa
     2461 gnavkrasdn lvraaqkaaf gkaedddvvv ktkfvggiaq iiaaqeemlk kereleeark
     2521 klaqirqqqy kflptelred eg
//
LOCUS       XP_041324714            2542 aa            linear   VRT 06-MAY-2021
DEFINITION  talin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324714
VERSION     XP_041324714.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468780.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2542
                     /product="talin-2 isoform X1"
                     /calculated_mol_wt=271564
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..655
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          602..>761
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     Region          1045..>1174
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1060,1067..1068,1071,1074..1075,1155..1156,1159,
                     1162..1163)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1656..1827
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1671,1678..1679,1682,1685..1686,1765..1766,1769,
                     1772..1773,1803,1810)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1850..1974
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2012..2135
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2337..2532
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2542
                     /gene="TLN2"
                     /coded_by="XM_041468780.1:138..7766"
                     /db_xref="GeneID:121354296"
ORIGIN      
        1 mvalslkicv rqcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdddprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqesieekk eestgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eytkqrgaek rifqehkncg emteieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgvtkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kptilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgi mpspqqqvtt
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqadlsevd nlpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpvd tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llkaartlas avsdllkavq ptsgeprqtv ltaagsigqa sgellrqige
      661 netderfqdv lmslakavan aaamlvlkak nvaqvaedtv lqnrviaaat qcalstsqlv
      721 acakvvspti sspvcqeqli eagklvdrsv encvracqaa tddsellkqv saaasivsqa
      781 lndllqhvrq fasrgepigr ydqatdtimc vtesifssmg dagemvrqar vlaqatsdlv
      841 namrsdaeae idmenskkll aaaklladst armveaakga aanpenedqq qrlreaaegl
      901 rvatnaaaqn aikkkivnrl eiaakqaaaa atqtiaasqn aavsnkntaa hqqlvqsckn
      961 vadhipqlvq gvrgsqaqae dlsaqlalin ssqnflqpgs kmvasakaav ptvtdqaaam
     1021 qlsqcaknla tslaelrtas qkaheacgpm eidsalntvq tlknelqdak maavdgqlkp
     1081 lpgetlekct qdlgstskav gssmaqlltc aaqgnehytg vaaretaqal ktlaqaargv
     1141 aastsdpvaa hamldsarnv megsamliqe akqalaapgd adsqqrlaqv akavshslnn
     1201 cvnclpgqkd vdvalksige sskkllvdsl ppssksfqea qselnqaaad lnqsagevvh
     1261 atrgqsgela aasgkfsddf defldagiem agqaqtkedq iqvignlksi smasskllla
     1321 akslsvdpga pnaknllaaa aravtesinq litlctqqap gqkecdnalr eletvkgmld
     1381 npnepvsdls yfdciegvme nskvlgesma gisqnaktgd llvfgecvgv askalcglte
     1441 aaaqaaylvg isdpnsqagq qglvdpiqfa ranqaiqmac qnlvdpassp sqvlsaativ
     1501 akhtsalcna criassktan pvakrhfvqs akevanstan lvktikaldg dfseenrnkc
     1561 riatapliea venltafasn pefvsipaqi stegsqaqep ilisartmle ssslliktar
     1621 slainpkdpp twsvlaghsh tvsdsiksli tsirdkapgq recdfsidgi nrcirdieqa
     1681 slaavsqsla trddisveal qeqltsvvqe ighlidpiat aargeaaqlg hkvtqlasyf
     1741 eplvlaavgv asktlnhqqq mtildqsktl aesalqilya akegggnpka shthdaitea
     1801 aqlmkeavdd imvtlneaas evgmvggmvd siaeamtkld egtppdpkgt fvdyqttvvk
     1861 yskaiavtaq emmtksvtnp eelgglasqm tndyghlalq grmaaataep eeigfqirtr
     1921 vqelghgcif lvqkagalqi cptdsytkre liecaravte kvslvlsalq agnkgtqaci
     1981 taasavsgii adldttimfa tagtlnaenn esfadhreni lktakalved tkllvsgaas
     2041 sqdklaqaaq ssantitqla evvklgaasl gsddpetqvv linaikdvak alsdligatk
     2101 gaaskpaddp smyqlkgaak vmvtnvtsll ktvkavedea trgtraleat ieyikqeltv
     2161 fqssevpekt sspeesirmt kgitmataka vaagnscrqe dviatanlsr kavadmltac
     2221 kqasyhpdvs eevreralrf gtectlgyle llehvllilq katpelkhql asfskrvana
     2281 vteliqsaea mkgtewvdpe dptviaetel lgaaasieaa akkleqlkpr akpkqadetl
     2341 dfeeqileaa ksiaaatsal vksasaaqre lvaqgkvgai panaaddgqw sqglisaarm
     2401 vaaatsnlce aanasvqgha seeklissak qvaastaqll vackvkadhd seamrrlqaa
     2461 gnavkrasdn lvraaqkaaf gkaedddvvv ktkfvggiaq iiaaqeemlk kereleeark
     2521 klaqirqqqy kflptelred eg
//
LOCUS       XP_041324715            2542 aa            linear   VRT 06-MAY-2021
DEFINITION  talin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324715
VERSION     XP_041324715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2542
                     /product="talin-2 isoform X1"
                     /calculated_mol_wt=271564
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..655
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          602..>761
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     Region          1045..>1174
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1060,1067..1068,1071,1074..1075,1155..1156,1159,
                     1162..1163)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1656..1827
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1671,1678..1679,1682,1685..1686,1765..1766,1769,
                     1772..1773,1803,1810)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1850..1974
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2012..2135
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2337..2532
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2542
                     /gene="TLN2"
                     /coded_by="XM_041468781.1:183..7811"
                     /db_xref="GeneID:121354296"
ORIGIN      
        1 mvalslkicv rqcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdddprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqesieekk eestgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eytkqrgaek rifqehkncg emteieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgvtkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kptilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgi mpspqqqvtt
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqadlsevd nlpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpvd tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llkaartlas avsdllkavq ptsgeprqtv ltaagsigqa sgellrqige
      661 netderfqdv lmslakavan aaamlvlkak nvaqvaedtv lqnrviaaat qcalstsqlv
      721 acakvvspti sspvcqeqli eagklvdrsv encvracqaa tddsellkqv saaasivsqa
      781 lndllqhvrq fasrgepigr ydqatdtimc vtesifssmg dagemvrqar vlaqatsdlv
      841 namrsdaeae idmenskkll aaaklladst armveaakga aanpenedqq qrlreaaegl
      901 rvatnaaaqn aikkkivnrl eiaakqaaaa atqtiaasqn aavsnkntaa hqqlvqsckn
      961 vadhipqlvq gvrgsqaqae dlsaqlalin ssqnflqpgs kmvasakaav ptvtdqaaam
     1021 qlsqcaknla tslaelrtas qkaheacgpm eidsalntvq tlknelqdak maavdgqlkp
     1081 lpgetlekct qdlgstskav gssmaqlltc aaqgnehytg vaaretaqal ktlaqaargv
     1141 aastsdpvaa hamldsarnv megsamliqe akqalaapgd adsqqrlaqv akavshslnn
     1201 cvnclpgqkd vdvalksige sskkllvdsl ppssksfqea qselnqaaad lnqsagevvh
     1261 atrgqsgela aasgkfsddf defldagiem agqaqtkedq iqvignlksi smasskllla
     1321 akslsvdpga pnaknllaaa aravtesinq litlctqqap gqkecdnalr eletvkgmld
     1381 npnepvsdls yfdciegvme nskvlgesma gisqnaktgd llvfgecvgv askalcglte
     1441 aaaqaaylvg isdpnsqagq qglvdpiqfa ranqaiqmac qnlvdpassp sqvlsaativ
     1501 akhtsalcna criassktan pvakrhfvqs akevanstan lvktikaldg dfseenrnkc
     1561 riatapliea venltafasn pefvsipaqi stegsqaqep ilisartmle ssslliktar
     1621 slainpkdpp twsvlaghsh tvsdsiksli tsirdkapgq recdfsidgi nrcirdieqa
     1681 slaavsqsla trddisveal qeqltsvvqe ighlidpiat aargeaaqlg hkvtqlasyf
     1741 eplvlaavgv asktlnhqqq mtildqsktl aesalqilya akegggnpka shthdaitea
     1801 aqlmkeavdd imvtlneaas evgmvggmvd siaeamtkld egtppdpkgt fvdyqttvvk
     1861 yskaiavtaq emmtksvtnp eelgglasqm tndyghlalq grmaaataep eeigfqirtr
     1921 vqelghgcif lvqkagalqi cptdsytkre liecaravte kvslvlsalq agnkgtqaci
     1981 taasavsgii adldttimfa tagtlnaenn esfadhreni lktakalved tkllvsgaas
     2041 sqdklaqaaq ssantitqla evvklgaasl gsddpetqvv linaikdvak alsdligatk
     2101 gaaskpaddp smyqlkgaak vmvtnvtsll ktvkavedea trgtraleat ieyikqeltv
     2161 fqssevpekt sspeesirmt kgitmataka vaagnscrqe dviatanlsr kavadmltac
     2221 kqasyhpdvs eevreralrf gtectlgyle llehvllilq katpelkhql asfskrvana
     2281 vteliqsaea mkgtewvdpe dptviaetel lgaaasieaa akkleqlkpr akpkqadetl
     2341 dfeeqileaa ksiaaatsal vksasaaqre lvaqgkvgai panaaddgqw sqglisaarm
     2401 vaaatsnlce aanasvqgha seeklissak qvaastaqll vackvkadhd seamrrlqaa
     2461 gnavkrasdn lvraaqkaaf gkaedddvvv ktkfvggiaq iiaaqeemlk kereleeark
     2521 klaqirqqqy kflptelred eg
//
LOCUS       XP_041324716            2502 aa            linear   VRT 06-MAY-2021
DEFINITION  talin-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324716
VERSION     XP_041324716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2502
                     /product="talin-2 isoform X2"
                     /calculated_mol_wt=267361
     Region          4..87
                     /region_name="FERM_F0_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F0 sub-domain, found in Talin-2 (TLN2); cd17172"
                     /db_xref="CDD:340692"
     Region          88..199
                     /region_name="FERM_F1_TLN2"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Talin-2 (TLN2); cd17174"
                     /db_xref="CDD:340694"
     Region          203..316
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     Region          312..403
                     /region_name="FERM_C_Talin"
                     /note="FERM domain C-lobe/F3 of Talin; cd10569"
                     /db_xref="CDD:269973"
     Site            order(320,342,344,352)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269973"
     Site            order(337,355,357..358,373..374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            order(357..363,372,399)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269973"
     Site            392..403
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:269973"
     Region          494..655
                     /region_name="Talin_middle"
                     /note="Talin, middle domain; pfam09141"
                     /db_xref="CDD:462691"
     Region          602..>761
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     Region          1045..>1174
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1060,1067..1068,1071,1074..1075,1155..1156,1159,
                     1162..1163)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1656..1827
                     /region_name="talin-RS"
                     /note="rod-segment of the talin C-terminal domain;
                     cd12150"
                     /db_xref="CDD:213393"
     Site            order(1671,1678..1679,1682,1685..1686,1765..1766,1769,
                     1772..1773,1803,1810)
                     /site_type="other"
                     /note="FERM domain interface [polypeptide binding]"
                     /db_xref="CDD:213393"
     Region          1850..1934
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          1972..2095
                     /region_name="VBS"
                     /note="Vinculin Binding Site; pfam08913"
                     /db_xref="CDD:430312"
     Region          2297..2492
                     /region_name="ILWEQ"
                     /note="I/LWEQ domain; smart00307"
                     /db_xref="CDD:214607"
     CDS             1..2502
                     /gene="TLN2"
                     /coded_by="XM_041468782.1:266..7774"
                     /db_xref="GeneID:121354296"
ORIGIN      
        1 mvalslkicv rqcnvvktmq fepstavyda crvirervpe aqtgqasdyg lflsdddprk
       61 giwleagrtl dyymlrngdi leykkkqrpq kirmldgsvk tvmvddsktv gellvticsr
      121 igitnyeeys liqesieekk eestgtlkkd rtllrderkm eklkaklhtd ddlnwldhsr
      181 tfreqgvden etlllrrkff ysdqnvdsrd pvqlnllyvq arddilngsh pvsfekacef
      241 ggfqaqiqfg phvehkhkpg fldlkeflpk eytkqrgaek rifqehkncg emteieakvk
      301 yvklarslrt ygvsfflvke kmkgknklvp rllgvtkdsv mrvdektkev lqewplttvk
      361 rwaaspksft ldfgeyqesy ysvqttegeq isqliagyid iilkkkqskd rfglegdees
      421 tmleesvspk kptilqqqfn rtgkvehgsv alpavmrsgs sgpetfnvgi mpspqqqvtt
      481 gqmhrghmpp ltsaqqalmg tintsmhavq qaqadlsevd nlpplgqdma srvwvqnkvd
      541 eskheihsqv daitagtasv vnltagdpvd tdytavgcai ttissnltem skgvkllaal
      601 mddevgsged llkaartlas avsdllkavq ptsgeprqtv ltaagsigqa sgellrqige
      661 netderfqdv lmslakavan aaamlvlkak nvaqvaedtv lqnrviaaat qcalstsqlv
      721 acakvvspti sspvcqeqli eagklvdrsv encvracqaa tddsellkqv saaasivsqa
      781 lndllqhvrq fasrgepigr ydqatdtimc vtesifssmg dagemvrqar vlaqatsdlv
      841 namrsdaeae idmenskkll aaaklladst armveaakga aanpenedqq qrlreaaegl
      901 rvatnaaaqn aikkkivnrl eiaakqaaaa atqtiaasqn aavsnkntaa hqqlvqsckn
      961 vadhipqlvq gvrgsqaqae dlsaqlalin ssqnflqpgs kmvasakaav ptvtdqaaam
     1021 qlsqcaknla tslaelrtas qkaheacgpm eidsalntvq tlknelqdak maavdgqlkp
     1081 lpgetlekct qdlgstskav gssmaqlltc aaqgnehytg vaaretaqal ktlaqaargv
     1141 aastsdpvaa hamldsarnv megsamliqe akqalaapgd adsqqrlaqv akavshslnn
     1201 cvnclpgqkd vdvalksige sskkllvdsl ppssksfqea qselnqaaad lnqsagevvh
     1261 atrgqsgela aasgkfsddf defldagiem agqaqtkedq iqvignlksi smasskllla
     1321 akslsvdpga pnaknllaaa aravtesinq litlctqqap gqkecdnalr eletvkgmld
     1381 npnepvsdls yfdciegvme nskvlgesma gisqnaktgd llvfgecvgv askalcglte
     1441 aaaqaaylvg isdpnsqagq qglvdpiqfa ranqaiqmac qnlvdpassp sqvlsaativ
     1501 akhtsalcna criassktan pvakrhfvqs akevanstan lvktikaldg dfseenrnkc
     1561 riatapliea venltafasn pefvsipaqi stegsqaqep ilisartmle ssslliktar
     1621 slainpkdpp twsvlaghsh tvsdsiksli tsirdkapgq recdfsidgi nrcirdieqa
     1681 slaavsqsla trddisveal qeqltsvvqe ighlidpiat aargeaaqlg hkvtqlasyf
     1741 eplvlaavgv asktlnhqqq mtildqsktl aesalqilya akegggnpka shthdaitea
     1801 aqlmkeavdd imvtlneaas evgmvggmvd siaeamtkld egtppdpkgt fvdyqttvvk
     1861 yskaiavtaq emigfqirtr vqelghgcif lvqkagalqi cptdsytkre liecaravte
     1921 kvslvlsalq agnkgtqaci taasavsgii adldttimfa tagtlnaenn esfadhreni
     1981 lktakalved tkllvsgaas sqdklaqaaq ssantitqla evvklgaasl gsddpetqvv
     2041 linaikdvak alsdligatk gaaskpaddp smyqlkgaak vmvtnvtsll ktvkavedea
     2101 trgtraleat ieyikqeltv fqssevpekt sspeesirmt kgitmataka vaagnscrqe
     2161 dviatanlsr kavadmltac kqasyhpdvs eevreralrf gtectlgyle llehvllilq
     2221 katpelkhql asfskrvana vteliqsaea mkgtewvdpe dptviaetel lgaaasieaa
     2281 akkleqlkpr akpkqadetl dfeeqileaa ksiaaatsal vksasaaqre lvaqgkvgai
     2341 panaaddgqw sqglisaarm vaaatsnlce aanasvqgha seeklissak qvaastaqll
     2401 vackvkadhd seamrrlqaa gnavkrasdn lvraaqkaaf gkaedddvvv ktkfvggiaq
     2461 iiaaqeemlk kereleeark klaqirqqqy kflptelred eg
//
LOCUS       XP_041324717             432 aa            linear   VRT 06-MAY-2021
DEFINITION  C2 calcium-dependent domain-containing protein 4C-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324717
VERSION     XP_041324717.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468783.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="C2 calcium-dependent domain-containing protein
                     4C-like"
                     /calculated_mol_wt=47278
     Region          333..430
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     CDS             1..432
                     /gene="LOC121354297"
                     /coded_by="XM_041468783.1:482..1780"
                     /db_xref="GeneID:121354297"
ORIGIN      
        1 mwllekirps hengnlpsss flglpqgqnl pekaqlrata fphvitpdri pefcipprlt
       61 ssgsikgsgf hqdhdsvdaa ltsdyspssc rhliqvesve eeisaleees tnadpqsqaa
      121 lslphfpras tsygfctlle sphtrrkesi fhgdsrgalp slklsrsran tfsgkgsmsn
      181 piaisfasvr lppkhlslhr qgacdsdtas ssdsspfssp llsrspprpc slikaqsqeg
      241 llcralkdks khsmprnnsl steessstdn spsairrase gllgirgfst scspmfpvdl
      301 scsrerlvge stvvmdkggm lrlsaeycse nerlrirlis aeglyddsve pktinccisf
      361 slvpgktqkq rstvikrsrn pifnedfffd giaeeelyrl svrmkatnkg csmkrdytlg
      421 erelslmsml av
//
LOCUS       XP_041324718             432 aa            linear   VRT 06-MAY-2021
DEFINITION  C2 calcium-dependent domain-containing protein 4C-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324718
VERSION     XP_041324718.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468784.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="C2 calcium-dependent domain-containing protein
                     4C-like"
                     /calculated_mol_wt=47278
     Region          333..430
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     CDS             1..432
                     /gene="LOC121354297"
                     /coded_by="XM_041468784.1:263..1561"
                     /db_xref="GeneID:121354297"
ORIGIN      
        1 mwllekirps hengnlpsss flglpqgqnl pekaqlrata fphvitpdri pefcipprlt
       61 ssgsikgsgf hqdhdsvdaa ltsdyspssc rhliqvesve eeisaleees tnadpqsqaa
      121 lslphfpras tsygfctlle sphtrrkesi fhgdsrgalp slklsrsran tfsgkgsmsn
      181 piaisfasvr lppkhlslhr qgacdsdtas ssdsspfssp llsrspprpc slikaqsqeg
      241 llcralkdks khsmprnnsl steessstdn spsairrase gllgirgfst scspmfpvdl
      301 scsrerlvge stvvmdkggm lrlsaeycse nerlrirlis aeglyddsve pktinccisf
      361 slvpgktqkq rstvikrsrn pifnedfffd giaeeelyrl svrmkatnkg csmkrdytlg
      421 erelslmsml av
//
LOCUS       XP_041324719             432 aa            linear   VRT 06-MAY-2021
DEFINITION  C2 calcium-dependent domain-containing protein 4C-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324719
VERSION     XP_041324719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="C2 calcium-dependent domain-containing protein
                     4C-like"
                     /calculated_mol_wt=47278
     Region          333..430
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     CDS             1..432
                     /gene="LOC121354297"
                     /coded_by="XM_041468785.1:250..1548"
                     /db_xref="GeneID:121354297"
ORIGIN      
        1 mwllekirps hengnlpsss flglpqgqnl pekaqlrata fphvitpdri pefcipprlt
       61 ssgsikgsgf hqdhdsvdaa ltsdyspssc rhliqvesve eeisaleees tnadpqsqaa
      121 lslphfpras tsygfctlle sphtrrkesi fhgdsrgalp slklsrsran tfsgkgsmsn
      181 piaisfasvr lppkhlslhr qgacdsdtas ssdsspfssp llsrspprpc slikaqsqeg
      241 llcralkdks khsmprnnsl steessstdn spsairrase gllgirgfst scspmfpvdl
      301 scsrerlvge stvvmdkggm lrlsaeycse nerlrirlis aeglyddsve pktinccisf
      361 slvpgktqkq rstvikrsrn pifnedfffd giaeeelyrl svrmkatnkg csmkrdytlg
      421 erelslmsml av
//
LOCUS       XP_041324720             432 aa            linear   VRT 06-MAY-2021
DEFINITION  C2 calcium-dependent domain-containing protein 4C-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324720
VERSION     XP_041324720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468786.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="C2 calcium-dependent domain-containing protein
                     4C-like"
                     /calculated_mol_wt=47278
     Region          333..430
                     /region_name="C2"
                     /note="Protein kinase C conserved region 2 (CalB);
                     smart00239"
                     /db_xref="CDD:214577"
     CDS             1..432
                     /gene="LOC121354297"
                     /coded_by="XM_041468786.1:379..1677"
                     /db_xref="GeneID:121354297"
ORIGIN      
        1 mwllekirps hengnlpsss flglpqgqnl pekaqlrata fphvitpdri pefcipprlt
       61 ssgsikgsgf hqdhdsvdaa ltsdyspssc rhliqvesve eeisaleees tnadpqsqaa
      121 lslphfpras tsygfctlle sphtrrkesi fhgdsrgalp slklsrsran tfsgkgsmsn
      181 piaisfasvr lppkhlslhr qgacdsdtas ssdsspfssp llsrspprpc slikaqsqeg
      241 llcralkdks khsmprnnsl steessstdn spsairrase gllgirgfst scspmfpvdl
      301 scsrerlvge stvvmdkggm lrlsaeycse nerlrirlis aeglyddsve pktinccisf
      361 slvpgktqkq rstvikrsrn pifnedfffd giaeeelyrl svrmkatnkg csmkrdytlg
      421 erelslmsml av
//
LOCUS       XP_041324721             280 aa            linear   VRT 06-MAY-2021
DEFINITION  neuroplastin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324721
VERSION     XP_041324721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..280
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..280
                     /product="neuroplastin isoform X1"
                     /calculated_mol_wt=30723
     Region          49..117
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          63..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          80..87
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          97..101
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          132..215
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          137..141
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          150..154
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          179..184
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..200
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..280
                     /gene="NPTN"
                     /coded_by="XM_041468787.1:118..960"
                     /db_xref="GeneID:121354299"
ORIGIN      
        1 mprsgplpaa fslllvtaal lpgpaaaqne prinasedvv lhvvgvavtl qcnltsspsp
       61 laasywvkng eeipgtrkas ntteyrilka raeesgeylc vfvfsgspva natievratp
      121 ditghkrsen knegqealmy cksvgfphpe wvwrkkvngv fedinnssgr ffisnkenyt
      181 elsitnlqin edpgeyqcna tnqvgsvsvt tilrvrshla plwpflgila eivilvviiv
      241 iyekrkrpde vpdddepagp mktnstnnhk dknlrqrntn
//
LOCUS       XP_041324722             276 aa            linear   VRT 06-MAY-2021
DEFINITION  neuroplastin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324722
VERSION     XP_041324722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="neuroplastin isoform X2"
                     /calculated_mol_wt=30266
     Region          49..117
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          63..67
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          80..87
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          97..101
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          132..215
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          137..141
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          150..154
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          179..184
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          195..200
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..276
                     /gene="NPTN"
                     /coded_by="XM_041468788.1:118..948"
                     /db_xref="GeneID:121354299"
ORIGIN      
        1 mprsgplpaa fslllvtaal lpgpaaaqne prinasedvv lhvvgvavtl qcnltsspsp
       61 laasywvkng eeipgtrkas ntteyrilka raeesgeylc vfvfsgspva natievratp
      121 ditghkrsen knegqealmy cksvgfphpe wvwrkkvngv fedinnssgr ffisnkenyt
      181 elsitnlqin edpgeyqcna tnqvgsvsvt tilrvrshla plwpflgila eivilvviiv
      241 iyekrkrpde vpdagpmktn stnnhkdknl rqrntn
//
LOCUS       XP_041324723             246 aa            linear   VRT 06-MAY-2021
DEFINITION  meiotic recombination protein REC114 [Pyrgilauda ruficollis].
ACCESSION   XP_041324723
VERSION     XP_041324723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..246
                     /product="meiotic recombination protein REC114"
                     /calculated_mol_wt=27081
     Region          33..243
                     /region_name="REC114-like"
                     /note="Meiotic recombination protein REC114-like;
                     pfam15165"
                     /db_xref="CDD:464541"
     CDS             1..246
                     /gene="REC114"
                     /coded_by="XM_041468789.1:1..741"
                     /db_xref="GeneID:121354300"
ORIGIN      
        1 maaagssrgs qpglasapgs agdtsllgsa tvwplkrygr flppkdgdde gqntswkvfe
       61 sneesgplvl tivesghffi sqgrtvlegf slidshkwlk ivrraeclll qaqaknecrm
      121 frvqfggscr eemqehccsc vqklsdyvpv qgaeeqslsq dsqamdteha pdetlpdsct
      181 slgerrsvaq laqsvlrqrp elppalrhpa wsarelgpfi rlclmdqhfp afvedvekel
      241 hrlake
//
LOCUS       XP_041324725             562 aa            linear   VRT 06-MAY-2021
DEFINITION  DET1 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324725
VERSION     XP_041324725.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468791.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="DET1 homolog isoform X1"
                     /calculated_mol_wt=64482
     Region          142..489
                     /region_name="Det1"
                     /note="De-etiolated protein 1 Det1; pfam09737"
                     /db_xref="CDD:462868"
     CDS             1..562
                     /gene="DET1"
                     /coded_by="XM_041468791.1:438..2126"
                     /db_xref="GeneID:121354301"
ORIGIN      
        1 mdheaptirp rriqnqnvih rlerrrissg kagthwhqvr vfhqnvfpnf tvvnvekppc
       61 flrkfspdgr yfiafssdqt sleiyeyqgc qaaedllqgy egeilangnd qrsvnirgrl
      121 ferffvllhi tnvasngehl nrecslftdd cryvivgsaa ylpeephppf fevyrnsesv
      181 tpnprspled yslhiidlht grlcdtrtfk cdkvilshnq glylyknila ilsvqqqtih
      241 vfqvtpegtf idvrtigrfc yeddlltlsa vypevqrdtq tgmanpykep finslkhrll
      301 vylwrraeqd gsaiakrrff qyfdqlrqlr mwkmqllden hlfikytsed vvtlrvtdps
      361 qpsffvvynm vtteviavfe ntsdellelf enfcdlfrna tlhseavqfp csassnnfar
      421 qiqrrfkdti vnakygghte avrrllgqlp isaqsysgsp yldlslfsyd dkwvsvmerp
      481 ktcgdhpirn sgwswdtnnt sqthnkllll vdtqrtlenp vcgahgrake tasikpgnip
      541 aaplesevls fakssgrsvq lg
//
LOCUS       XP_041324726             562 aa            linear   VRT 06-MAY-2021
DEFINITION  DET1 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324726
VERSION     XP_041324726.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468792.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="DET1 homolog isoform X1"
                     /calculated_mol_wt=64482
     Region          142..489
                     /region_name="Det1"
                     /note="De-etiolated protein 1 Det1; pfam09737"
                     /db_xref="CDD:462868"
     CDS             1..562
                     /gene="DET1"
                     /coded_by="XM_041468792.1:330..2018"
                     /db_xref="GeneID:121354301"
ORIGIN      
        1 mdheaptirp rriqnqnvih rlerrrissg kagthwhqvr vfhqnvfpnf tvvnvekppc
       61 flrkfspdgr yfiafssdqt sleiyeyqgc qaaedllqgy egeilangnd qrsvnirgrl
      121 ferffvllhi tnvasngehl nrecslftdd cryvivgsaa ylpeephppf fevyrnsesv
      181 tpnprspled yslhiidlht grlcdtrtfk cdkvilshnq glylyknila ilsvqqqtih
      241 vfqvtpegtf idvrtigrfc yeddlltlsa vypevqrdtq tgmanpykep finslkhrll
      301 vylwrraeqd gsaiakrrff qyfdqlrqlr mwkmqllden hlfikytsed vvtlrvtdps
      361 qpsffvvynm vtteviavfe ntsdellelf enfcdlfrna tlhseavqfp csassnnfar
      421 qiqrrfkdti vnakygghte avrrllgqlp isaqsysgsp yldlslfsyd dkwvsvmerp
      481 ktcgdhpirn sgwswdtnnt sqthnkllll vdtqrtlenp vcgahgrake tasikpgnip
      541 aaplesevls fakssgrsvq lg
//
LOCUS       XP_041324727             562 aa            linear   VRT 06-MAY-2021
DEFINITION  DET1 homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324727
VERSION     XP_041324727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="DET1 homolog isoform X1"
                     /calculated_mol_wt=64482
     Region          142..489
                     /region_name="Det1"
                     /note="De-etiolated protein 1 Det1; pfam09737"
                     /db_xref="CDD:462868"
     CDS             1..562
                     /gene="DET1"
                     /coded_by="XM_041468793.1:101..1789"
                     /db_xref="GeneID:121354301"
ORIGIN      
        1 mdheaptirp rriqnqnvih rlerrrissg kagthwhqvr vfhqnvfpnf tvvnvekppc
       61 flrkfspdgr yfiafssdqt sleiyeyqgc qaaedllqgy egeilangnd qrsvnirgrl
      121 ferffvllhi tnvasngehl nrecslftdd cryvivgsaa ylpeephppf fevyrnsesv
      181 tpnprspled yslhiidlht grlcdtrtfk cdkvilshnq glylyknila ilsvqqqtih
      241 vfqvtpegtf idvrtigrfc yeddlltlsa vypevqrdtq tgmanpykep finslkhrll
      301 vylwrraeqd gsaiakrrff qyfdqlrqlr mwkmqllden hlfikytsed vvtlrvtdps
      361 qpsffvvynm vtteviavfe ntsdellelf enfcdlfrna tlhseavqfp csassnnfar
      421 qiqrrfkdti vnakygghte avrrllgqlp isaqsysgsp yldlslfsyd dkwvsvmerp
      481 ktcgdhpirn sgwswdtnnt sqthnkllll vdtqrtlenp vcgahgrake tasikpgnip
      541 aaplesevls fakssgrsvq lg
//
LOCUS       XP_041324728             551 aa            linear   VRT 06-MAY-2021
DEFINITION  DET1 homolog isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324728
VERSION     XP_041324728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="DET1 homolog isoform X2"
                     /calculated_mol_wt=63903
     Region          142..548
                     /region_name="Det1"
                     /note="De-etiolated protein 1 Det1; pfam09737"
                     /db_xref="CDD:462868"
     CDS             1..551
                     /gene="DET1"
                     /coded_by="XM_041468794.1:309..1964"
                     /db_xref="GeneID:121354301"
ORIGIN      
        1 mdheaptirp rriqnqnvih rlerrrissg kagthwhqvr vfhqnvfpnf tvvnvekppc
       61 flrkfspdgr yfiafssdqt sleiyeyqgc qaaedllqgy egeilangnd qrsvnirgrl
      121 ferffvllhi tnvasngehl nrecslftdd cryvivgsaa ylpeephppf fevyrnsesv
      181 tpnprspled yslhiidlht grlcdtrtfk cdkvilshnq glylyknila ilsvqqqtih
      241 vfqvtpegtf idvrtigrfc yeddlltlsa vypevqrdtq tgmanpykep finslkhrll
      301 vylwrraeqd gsaiakrrff qyfdqlrqlr mwkmqllden hlfikytsed vvtlrvtdps
      361 qpsffvvynm vtteviavfe ntsdellelf enfcdlfrna tlhseavqfp csassnnfar
      421 qiqrrfkdti vnakygghte avrrllgqlp isaqsysgsp yldlslfsyd dkwvsvmerp
      481 ktcgdhpirf yardsgllkf eiqagllgrp inhtvrrlva ftfhpfepfa isvqrtnaey
      541 vvnfhmrhsc t
//
LOCUS       XP_041324729             270 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L46, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324729
VERSION     XP_041324729.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468795.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..270
                     /product="39S ribosomal protein L46, mitochondrial"
                     /calculated_mol_wt=31018
     Region          34..132
                     /region_name="MRP-L46"
                     /note="39S mitochondrial ribosomal protein L46; pfam11788"
                     /db_xref="CDD:432074"
     Region          127..266
                     /region_name="NUDIX_MRP_L46"
                     /note="Mitochondrial ribosomal protein L46; cd04661"
                     /db_xref="CDD:467546"
     CDS             1..270
                     /gene="MRPL46"
                     /coded_by="XM_041468795.1:18..830"
                     /db_xref="GeneID:121354302"
ORIGIN      
        1 maghcgaram aaplrpraag sarwvcsaaa rrpwklfgam cllrlpritq plekeeeeva
       61 almeqielek slysdhemrk leeeeqlkrk mdslydedea rgktvimaqd leekweqkfl
      121 qfkaapritd adksndrtsl nrkldsnlml lvkqkignqe lwllpqvewq pgetlrstae
      181 ramatflgdh iqakvlgnap ygiykykfpr airtennvga kvffykaflq ssdlsqaepk
      241 adylwvtkke lgdylkseyl kkvnrflldl
//
LOCUS       XP_041324730             183 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S11, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324730
VERSION     XP_041324730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="28S ribosomal protein S11, mitochondrial"
                     /calculated_mol_wt=19238
     Region          74..183
                     /region_name="RpsK"
                     /note="Ribosomal protein S11 [Translation, ribosomal
                     structure and biogenesis]; COG0100"
                     /db_xref="CDD:439870"
     CDS             1..183
                     /gene="MRPS11"
                     /coded_by="XM_041468796.1:54..605"
                     /db_xref="GeneID:121354303"
ORIGIN      
        1 msaamalagr rvlgwggraa alcrglrtgp prlqdvagaa aketekqsat epsslilqrn
       61 smrwdgkvye evpiahikat ynnthiqvvs fdnqpfsrts cgtegfqnak kgtaiaaqta
      121 amaaavkarg kgvlhvrvmv kglgpgrkaa ikgltmggle iisitdnspv phngcrprka
      181 rrv
//
LOCUS       XP_041324731             619 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324731
VERSION     XP_041324731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468797.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="myelin expression factor 2 isoform X1"
                     /calculated_mol_wt=65599
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>615
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          543..619
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..619
                     /gene="MYEF2"
                     /coded_by="XM_041468797.1:71..1930"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pggmgidgpg fggmsrmggg lpgfrgmegm pnmggfgvnr
      421 mggkmfrggm ganmerefgr gdmalnrgfg esfgrmggam igvfaggmga psmgpirsgm
      481 sggmggmnnm aggmgmdrmg sgfdrmgpam gggldrnmdi drgfgpgpmg ggmrerlgsk
      541 gnqifvrnlp fdltwqklke kfsqcghvmf aeikmengks kgcgtvrfds pesaekacri
      601 mngikisgre idvrldrna
//
LOCUS       XP_041324732             618 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324732
VERSION     XP_041324732.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468798.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..618
                     /product="myelin expression factor 2 isoform X2"
                     /calculated_mol_wt=65543
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>614
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          542..618
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..618
                     /gene="MYEF2"
                     /coded_by="XM_041468798.1:72..1928"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pggmgidgpg fggmsrmggg lpgfrgmegm pnmggfgvnr
      421 mgemfrggmg anmerefgrg dmalnrgfge sfgrmggami gvfaggmgap smgpirsgms
      481 ggmggmnnma ggmgmdrmgs gfdrmgpamg ggldrnmdid rgfgpgpmgg gmrerlgskg
      541 nqifvrnlpf dltwqklkek fsqcghvmfa eikmengksk gcgtvrfdsp esaekacrim
      601 ngikisgrei dvrldrna
//
LOCUS       XP_041324733             610 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324733
VERSION     XP_041324733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..610
                     /product="myelin expression factor 2 isoform X3"
                     /calculated_mol_wt=64654
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>606
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          534..610
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..610
                     /gene="MYEF2"
                     /coded_by="XM_041468799.1:71..1903"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pggmgidgpg fggmsrmggg mpnmggfgvn rmggkmfrgg
      421 mganmerefg rgdmalnrgf gesfgrmgga migvfaggmg apsmgpirsg msggmggmnn
      481 maggmgmdrm gsgfdrmgpa mgggldrnmd idrgfgpgpm gggmrerlgs kgnqifvrnl
      541 pfdltwqklk ekfsqcghvm faeikmengk skgcgtvrfd spesaekacr imngikisgr
      601 eidvrldrna
//
LOCUS       XP_041324734             609 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324734
VERSION     XP_041324734.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468800.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="myelin expression factor 2 isoform X4"
                     /calculated_mol_wt=64598
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>605
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          533..609
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..609
                     /gene="MYEF2"
                     /coded_by="XM_041468800.1:71..1900"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pggmgidgpg fggmsrmggg mpnmggfgvn rmgemfrggm
      421 ganmerefgr gdmalnrgfg esfgrmggam igvfaggmga psmgpirsgm sggmggmnnm
      481 aggmgmdrmg sgfdrmgpam gggldrnmdi drgfgpgpmg ggmrerlgsk gnqifvrnlp
      541 fdltwqklke kfsqcghvmf aeikmengks kgcgtvrfds pesaekacri mngikisgre
      601 idvrldrna
//
LOCUS       XP_041324735             602 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324735
VERSION     XP_041324735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..602
                     /product="myelin expression factor 2 isoform X5"
                     /calculated_mol_wt=64033
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>598
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          526..602
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..602
                     /gene="MYEF2"
                     /coded_by="XM_041468801.1:71..1879"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pgglpgfrgm egmpnmggfg vnrmggkmfr ggmganmere
      421 fgrgdmalnr gfgesfgrmg gamigvfagg mgapsmgpir sgmsggmggm nnmaggmgmd
      481 rmgsgfdrmg pamgggldrn mdidrgfgpg pmgggmrerl gskgnqifvr nlpfdltwqk
      541 lkekfsqcgh vmfaeikmen gkskgcgtvr fdspesaeka crimngikis greidvrldr
      601 na
//
LOCUS       XP_041324736             601 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324736
VERSION     XP_041324736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="myelin expression factor 2 isoform X6"
                     /calculated_mol_wt=63977
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>597
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          525..601
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..601
                     /gene="MYEF2"
                     /coded_by="XM_041468802.1:71..1876"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pgglpgfrgm egmpnmggfg vnrmgemfrg gmganmeref
      421 grgdmalnrg fgesfgrmgg amigvfaggm gapsmgpirs gmsggmggmn nmaggmgmdr
      481 mgsgfdrmgp amgggldrnm didrgfgpgp mgggmrerlg skgnqifvrn lpfdltwqkl
      541 kekfsqcghv mfaeikmeng kskgcgtvrf dspesaekac rimngikisg reidvrldrn
      601 a
//
LOCUS       XP_041324737             595 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324737
VERSION     XP_041324737.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468803.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..595
                     /product="myelin expression factor 2 isoform X7"
                     /calculated_mol_wt=63378
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>591
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          519..595
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..595
                     /gene="MYEF2"
                     /coded_by="XM_041468803.1:71..1858"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pggmgidgpg fggmsrmggg lpgfrgmegm pnmggfgvnr
      421 mggkmfrggm ganmerefgr gdmalnrgfg esfgrmgggm ggmnnmaggm gmdrmgsgfd
      481 rmgpamgggl drnmdidrgf gpgpmgggmr erlgskgnqi fvrnlpfdlt wqklkekfsq
      541 cghvmfaeik mengkskgcg tvrfdspesa ekacrimngi kisgreidvr ldrna
//
LOCUS       XP_041324739             594 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin expression factor 2 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324739
VERSION     XP_041324739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="myelin expression factor 2 isoform X8"
                     /calculated_mol_wt=63321
     Region          121..196
                     /region_name="RRM1_MYEF2"
                     /note="RNA recognition motif 1 (RRM1) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12658"
                     /db_xref="CDD:410059"
     Region          144..>590
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     Region          253..328
                     /region_name="RRM2_MYEF2"
                     /note="RNA recognition motif 2 (RRM2) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12660"
                     /db_xref="CDD:410061"
     Region          518..594
                     /region_name="RRM3_MYEF2"
                     /note="RNA recognition motif 3 (RRM3) found in vertebrate
                     myelin expression factor 2 (MEF-2); cd12662"
                     /db_xref="CDD:410063"
     CDS             1..594
                     /gene="MYEF2"
                     /coded_by="XM_041468805.1:71..1855"
                     /db_xref="GeneID:121354304"
ORIGIN      
        1 maesdraeaa aprraeeaag qapqpppqqq qqpapqqqpp qqppqdeeaa aaaapgsgag
       61 sangvkmdnd etakegkapv kekfvakaka ipslgnknkf hpyskeknag sgdkkavnrn
      121 rvfisnipyd mkwqaikdlm rekvgevtyv elfkdaegks rgcgvvefkd eefvkkaldt
      181 mnkydlsgrp lnikedpege harralqrgg gqfpgghgpd aapgmmnlpp silnnpnipp
      241 evisnlqagr lgstifvanl dfkvgwkklk evfsiagtvk radikedkdg ksrgmgtvtf
      301 eqaieavqai smfngqflfd rpmhvkmddk svphedfrvv dskssqlprg lggigmglgp
      361 ggqpisatql smgggmgsmg pggmgidgpg fggmsrmggg lpgfrgmegm pnmggfgvnr
      421 mgemfrggmg anmerefgrg dmalnrgfge sfgrmgggmg gmnnmaggmg mdrmgsgfdr
      481 mgpamgggld rnmdidrgfg pgpmgggmre rlgskgnqif vrnlpfdltw qklkekfsqc
      541 ghvmfaeikm engkskgcgt vrfdspesae kacrimngik isgreidvrl drna
//
LOCUS       XP_041324740             423 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/potassium/calcium exchanger 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324740
VERSION     XP_041324740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..423
                     /product="sodium/potassium/calcium exchanger 5"
                     /calculated_mol_wt=46173
     Region          <1..>146
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          <209..413
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..423
                     /gene="SLC24A5"
                     /coded_by="XM_041468806.1:16..1287"
                     /db_xref="GeneID:121354306"
ORIGIN      
        1 mflavsivcd dyflpsleii seclglsqdv agatfmaags sapelvtafl gafvtkgdig
       61 vstilgsaiy nllgisaacg lfssvvsrls cwplfrdcla ytisaaavla misdnriywy
      121 esasllliyg cyililcfdi kinqylmkkf spcctcftka meenaeqqpl vgwrdesgpl
      181 irqqsrtdsg ifqdeldysq lstslhglde isedhpnvft mpeadmkril wvlslpiitl
      241 lyltipdcrr qfwrnwfmvt flisaawisa ityvlvwmvt iagetlgipe svmgltllaa
      301 gtsvpdtvas vlvarkgngd mamsnivgsn vfdmlclgip wfiktafint sgpievnssg
      361 ltytaislic svgfiflavh lngwkidkkm gticlvlylv ftvlsilyel giignnptrv
      421 cgn
//
LOCUS       XP_041324741            1888 aa            linear   VRT 06-MAY-2021
DEFINITION  transient receptor potential cation channel subfamily M member 7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324741
VERSION     XP_041324741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468807.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1888
                     /product="transient receptor potential cation channel
                     subfamily M member 7"
                     /calculated_mol_wt=214315
     Region          106..371
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          <722..1145
                     /region_name="TRPV"
                     /note="Transient Receptor Potential channel, Vanilloid
                     subfamily (TRPV); cl40437"
                     /db_xref="CDD:454755"
     Region          1198..1253
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     Region          1603..1841
                     /region_name="Alpha_kinase_ChaK1_TRMP7"
                     /note="Alpha-kinase domain of channel kinase 1, also
                     called transient receptor potential cation channel
                     subfamily M member 7; cd16971"
                     /db_xref="CDD:341221"
     Site            order(1642..1647,1649,1669,1671,1726,1743..1746,1790,1792,
                     1800)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341221"
     CDS             1..1888
                     /gene="TRPM7"
                     /coded_by="XM_041468807.1:257..5923"
                     /db_xref="GeneID:121354307"
ORIGIN      
        1 msqkswient ftkrecvyii psskdphrcl pgcqicqqlv rcccgrlvrq hacftaslam
       61 kysdvklgen ynqeieewsv ekhteqtstd aygvinfqgg shsyrakyvr lsydtkpeai
      121 lqlmlkewqm elpklvisvh ggmqkfelhp rikqllgkgl ikaavttgaw iitggvntgv
      181 akhvgdalre hasrssrkic tigiapwgvi enrndlvgrd vvapyqtlln plsklnvlnn
      241 lhshfilvdd gtvgkygaev klrrelekti nlqriharig qgvpvvalvf eggpnviltv
      301 ldflqesppv pvvvcegtgr aadilayvhk qteeggnvpe gaepeiisti kktfnfgqse
      361 avhlfqtlle cmkkkelitv fhigsdehqd idvailtall kgtnasafdq lvltlawdrv
      421 diaknhvfvy gqqwlvgsle qamldalvmd rvafvkllie ngvsmhkflt iprleelynt
      481 kqgptnptlf hlvrdvkqgn lppgykinli dvglvieylm ggtyrctytr krfraiynsl
      541 sgnnrrsgrn pssttpqmck sheafgnrad kkekmrhnhf iktaqpykpk idtgaeegkk
      601 krtkdeivdi ddpetrrfay plnelllwav lmkrqkmalf fwqhgeesma kalvackvyr
      661 smayeakqsd lvddtseelk qysnefgqla velleqsfrq detmamkllt yelknwsnst
      721 clklavssrl rpfvahtctq mllsdmwmgr lnmrknswyk vilsillppa illleyktka
      781 emshipqsqd ahqmamddse nnfqtaadei pmevfkevri ldstfekhdm etpakpkrlp
      841 itqkfyafyh apivkfwfnt laylgflmly tfvvlvkmee lpsvqewivi ayiftsaiek
      901 ireifmseag kinqkikvwf sdyfnisdtv aivtffigfa lrfgakgnfg entyrenyvf
      961 vagritycln iifwyvrlld flavnqqagp yvmmigkmva nmfyivvima lvllsfgvpr
     1021 kailypdeap swtlardivf hpywmifgev yayeidvcan nsdekvahlc gpgtwltpfl
     1081 qavylfvqyi imvnlliaff nnvylqvkai snivwkyqry hfimayhekp vlpppliils
     1141 hmaslfccic krrktdkasd gpklflteed qkklhdfeel cvemyfnekd dkfhsgseer
     1201 irvtferveq mciqikevgd rvnyikrslq sldsqighlq dlsaltvdtl ktltaqkase
     1261 askvhneitr elsiskhlaq nliedgslrs svwkkhsign vfgsfpqggl esnnallcni
     1321 sirddkevqh ktigqelala prreeknfqe agssgsalfs navsppelrq riqaaeisks
     1381 sknkklgnss nsmphvtspt tkffvstpsr pscksqldss akheetvfsk ategdnnvef
     1441 gafvghrdsm dlqrfkeaas kmrersadie eqqedfkkai legiettriq glqtdsglqq
     1501 ssscggftdp ltahseqlys ksrrassedt qqvdskaall tdwlqgrpsn ssqmpseeda
     1561 lngiaspfkp imdinyyysa vernnlmrls qsipftpvpp rgepvtvyrl eesspsilnn
     1621 smsswsqlgl cakieflske emggglrral kvvctwseyd ilksghlyii ksflpevvnt
     1681 wssiykedtv lhlclreiqq qraaqkltfa fnqmkpksip ysprflevfl lychsagqwf
     1741 aveecmtgef rkynnnngde iiptnmleev mlafshwtye ytrgellvld lqgvgenltd
     1801 psvikagekr sydmvfgpan lgedaiknfr akhhcnsccr klklpdlkrn dytpdkiifp
     1861 qddapeltiq pgsctkdsdp ansirlml
//
LOCUS       XP_041324742             215 aa            linear   VRT 06-MAY-2021
DEFINITION  AN1-type zinc finger protein 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324742
VERSION     XP_041324742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="AN1-type zinc finger protein 6 isoform X1"
                     /calculated_mol_wt=23408
     Region          19..42
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          <55..>142
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          156..193
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..215
                     /gene="ZFAND6"
                     /coded_by="XM_041468808.1:110..757"
                     /db_xref="GeneID:121354308"
ORIGIN      
        1 mfieegrmaq etnrsqvpml cstgcgfygn prtngmcsvc ykehlqrqns ngrisppaas
       61 vssiteslpv qctegsaqet qstldststp smqpspvssq slltesvass qadstavdkt
      121 vpeteelqas vsenaeptpe eqdksldkpk qkknrcfmcr kkvgltgfec rcgnvycgmh
      181 rysdvhscsy nykadaaeki rkenpvvvge kiqki
//
LOCUS       XP_041324743             208 aa            linear   VRT 06-MAY-2021
DEFINITION  AN1-type zinc finger protein 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324743
VERSION     XP_041324743.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468809.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="AN1-type zinc finger protein 6 isoform X2"
                     /calculated_mol_wt=22545
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          <48..>135
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          149..186
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..208
                     /gene="ZFAND6"
                     /coded_by="XM_041468809.1:247..873"
                     /db_xref="GeneID:121354308"
ORIGIN      
        1 maqetnrsqv pmlcstgcgf ygnprtngmc svcykehlqr qnsngrispp aasvssites
       61 lpvqctegsa qetqstldst stpsmqpspv ssqslltesv assqadstav dktvpeteel
      121 qasvsenaep tpeeqdksld kpkqkknrcf mcrkkvgltg fecrcgnvyc gmhrysdvhs
      181 csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_041324744             208 aa            linear   VRT 06-MAY-2021
DEFINITION  AN1-type zinc finger protein 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324744
VERSION     XP_041324744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="AN1-type zinc finger protein 6 isoform X2"
                     /calculated_mol_wt=22545
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          <48..>135
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          149..186
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..208
                     /gene="ZFAND6"
                     /coded_by="XM_041468810.1:167..793"
                     /db_xref="GeneID:121354308"
ORIGIN      
        1 maqetnrsqv pmlcstgcgf ygnprtngmc svcykehlqr qnsngrispp aasvssites
       61 lpvqctegsa qetqstldst stpsmqpspv ssqslltesv assqadstav dktvpeteel
      121 qasvsenaep tpeeqdksld kpkqkknrcf mcrkkvgltg fecrcgnvyc gmhrysdvhs
      181 csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_041324745             208 aa            linear   VRT 06-MAY-2021
DEFINITION  AN1-type zinc finger protein 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324745
VERSION     XP_041324745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="AN1-type zinc finger protein 6 isoform X2"
                     /calculated_mol_wt=22545
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          <48..>135
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          149..186
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..208
                     /gene="ZFAND6"
                     /coded_by="XM_041468811.1:271..897"
                     /db_xref="GeneID:121354308"
ORIGIN      
        1 maqetnrsqv pmlcstgcgf ygnprtngmc svcykehlqr qnsngrispp aasvssites
       61 lpvqctegsa qetqstldst stpsmqpspv ssqslltesv assqadstav dktvpeteel
      121 qasvsenaep tpeeqdksld kpkqkknrcf mcrkkvgltg fecrcgnvyc gmhrysdvhs
      181 csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_041324746             208 aa            linear   VRT 06-MAY-2021
DEFINITION  AN1-type zinc finger protein 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324746
VERSION     XP_041324746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="AN1-type zinc finger protein 6 isoform X2"
                     /calculated_mol_wt=22545
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          <48..>135
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          149..186
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..208
                     /gene="ZFAND6"
                     /coded_by="XM_041468812.1:87..713"
                     /db_xref="GeneID:121354308"
ORIGIN      
        1 maqetnrsqv pmlcstgcgf ygnprtngmc svcykehlqr qnsngrispp aasvssites
       61 lpvqctegsa qetqstldst stpsmqpspv ssqslltesv assqadstav dktvpeteel
      121 qasvsenaep tpeeqdksld kpkqkknrcf mcrkkvgltg fecrcgnvyc gmhrysdvhs
      181 csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_041324747             208 aa            linear   VRT 06-MAY-2021
DEFINITION  AN1-type zinc finger protein 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324747
VERSION     XP_041324747.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468813.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="AN1-type zinc finger protein 6 isoform X2"
                     /calculated_mol_wt=22545
     Region          12..35
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     Region          <48..>135
                     /region_name="PRK11633"
                     /note="cell division protein DedD; Provisional"
                     /db_xref="CDD:236940"
     Region          149..186
                     /region_name="ZnF_AN1"
                     /note="AN1-like Zinc finger; smart00154"
                     /db_xref="CDD:197545"
     CDS             1..208
                     /gene="ZFAND6"
                     /coded_by="XM_041468813.1:164..790"
                     /db_xref="GeneID:121354308"
ORIGIN      
        1 maqetnrsqv pmlcstgcgf ygnprtngmc svcykehlqr qnsngrispp aasvssites
       61 lpvqctegsa qetqstldst stpsmqpspv ssqslltesv assqadstav dktvpeteel
      121 qasvsenaep tpeeqdksld kpkqkknrcf mcrkkvgltg fecrcgnvyc gmhrysdvhs
      181 csynykadaa ekirkenpvv vgekiqki
//
LOCUS       XP_041324748             112 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 19 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324748
VERSION     XP_041324748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..112
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..112
                     /product="cAMP-regulated phosphoprotein 19 isoform X1"
                     /calculated_mol_wt=12218
     Region          28..103
                     /region_name="Endosulfine"
                     /note="cAMP-regulated phosphoprotein/endosulfine conserved
                     region; pfam04667"
                     /db_xref="CDD:398375"
     CDS             1..112
                     /gene="ARPP19"
                     /coded_by="XM_041468814.1:225..563"
                     /db_xref="GeneID:121354310"
ORIGIN      
        1 msaespepas aeeqkemedk vlspekaeea klkaryphlg qkpggsdflr krlqkgqkyf
       61 dsgdynmaka kmknkqlpta apdktevtgd hiptpqdlpq rkpslvaskl ag
//
LOCUS       XP_041324749              96 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 19 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324749
VERSION     XP_041324749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="cAMP-regulated phosphoprotein 19 isoform X2"
                     /calculated_mol_wt=10516
     Region          12..87
                     /region_name="Endosulfine"
                     /note="cAMP-regulated phosphoprotein/endosulfine conserved
                     region; pfam04667"
                     /db_xref="CDD:398375"
     CDS             1..96
                     /gene="ARPP19"
                     /coded_by="XM_041468815.1:173..463"
                     /db_xref="GeneID:121354310"
ORIGIN      
        1 medkvlspek aeeaklkary phlgqkpggs dflrkrlqkg qkyfdsgdyn makakmknkq
       61 lptaapdkte vtgdhiptpq dlpqrkpslv asklag
//
LOCUS       XP_041324750              96 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-regulated phosphoprotein 19 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324750
VERSION     XP_041324750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="cAMP-regulated phosphoprotein 19 isoform X2"
                     /calculated_mol_wt=10516
     Region          12..87
                     /region_name="Endosulfine"
                     /note="cAMP-regulated phosphoprotein/endosulfine conserved
                     region; pfam04667"
                     /db_xref="CDD:398375"
     CDS             1..96
                     /gene="ARPP19"
                     /coded_by="XM_041468816.1:126..416"
                     /db_xref="GeneID:121354310"
ORIGIN      
        1 medkvlspek aeeaklkary phlgqkpggs dflrkrlqkg qkyfdsgdyn makakmknkq
       61 lptaapdkte vtgdhiptpq dlpqrkpslv asklag
//
LOCUS       XP_041324752             436 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc transporter 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324752
VERSION     XP_041324752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468818.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="zinc transporter 4 isoform X1"
                     /calculated_mol_wt=47595
     Region          124..420
                     /region_name="CDF"
                     /note="cation diffusion facilitator family transporter;
                     TIGR01297"
                     /db_xref="CDD:273544"
     CDS             1..436
                     /gene="SLC30A4"
                     /coded_by="XM_041468818.1:11..1321"
                     /db_xref="GeneID:121354311"
ORIGIN      
        1 magaglwtsi ksllgrredp lflndssafd fsdevgdedf prfnklrvvv addgseaape
       61 tpvngaspgl psddeslldr dialrsarag rpdpcsgcss rrerskqrkv kkrltlaall
      121 yllfmtgeli ggyvanslai mtdalhmltd lsgiiltlla lwlsaksptk rftfgfhrle
      181 vlsaiisvll vyilmaflly eavqrtihmd yeingdimli taavgvavnl imgfllnqsg
      241 hlhshshphs hvpqpsspst aqasshghss hghsslavra afvhalgdlv qsigvlvaay
      301 iirfkpeyki adpictyvfs ilvifttiri lcdtgviile gvprhlnvdr ikedlmkied
      361 vysiedlnvw sltagkttai vhlqlvpgss skwedvqska rqlllntfgm ykcsvqlqsy
      421 kqemsktcas cqsssa
//
LOCUS       XP_041324753             387 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc transporter 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324753
VERSION     XP_041324753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..387
                     /product="zinc transporter 4 isoform X2"
                     /calculated_mol_wt=42250
     Region          <130..371
                     /region_name="CDF"
                     /note="cation diffusion facilitator family transporter;
                     TIGR01297"
                     /db_xref="CDD:273544"
     CDS             1..387
                     /gene="SLC30A4"
                     /coded_by="XM_041468819.1:11..1174"
                     /db_xref="GeneID:121354311"
ORIGIN      
        1 magaglwtsi ksllgrredp lflndssafd fsdevgdedf prfnklrvvv addgseaape
       61 tpvngaspgl psddeslldr dialrsarag rpdpcsgcss rrerskqrkv kkrltlaall
      121 yllfmtgeli evlsaiisvl lvyilmafll yeavqrtihm dyeingdiml itaavgvavn
      181 limgfllnqs ghlhshshph shvpqpssps taqasshghs shghsslavr aafvhalgdl
      241 vqsigvlvaa yiirfkpeyk iadpictyvf silvifttir ilcdtgviil egvprhlnvd
      301 rikedlmkie dvysiedlnv wsltagktta ivhlqlvpgs sskwedvqsk arqlllntfg
      361 mykcsvqlqs ykqemsktca scqsssa
//
LOCUS       XP_041324754              86 aa            linear   VRT 06-MAY-2021
DEFINITION  normal mucosa of esophagus-specific gene 1 protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324754
VERSION     XP_041324754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468820.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="normal mucosa of esophagus-specific gene 1
                     protein"
                     /calculated_mol_wt=9557
     Region          14..79
                     /region_name="B12D"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     pfam06522"
                     /db_xref="CDD:461937"
     CDS             1..86
                     /gene="CUNH15orf48"
                     /coded_by="XM_041468820.1:113..373"
                     /db_xref="GeneID:121354312"
ORIGIN      
        1 mnkgilhtlk tkreliplag ilslaaagaf sfcvyslfrk sdviihkigs sepwetidpa
       61 kpqklvtisq qwrpieelee vkkltk
//
LOCUS       XP_041324755              86 aa            linear   VRT 06-MAY-2021
DEFINITION  normal mucosa of esophagus-specific gene 1 protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324755
VERSION     XP_041324755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="normal mucosa of esophagus-specific gene 1
                     protein"
                     /calculated_mol_wt=9557
     Region          14..79
                     /region_name="B12D"
                     /note="NADH-ubiquinone reductase complex 1 MLRQ subunit;
                     pfam06522"
                     /db_xref="CDD:461937"
     CDS             1..86
                     /gene="CUNH15orf48"
                     /coded_by="XM_041468821.1:113..373"
                     /db_xref="GeneID:121354312"
ORIGIN      
        1 mnkgilhtlk tkreliplag ilslaaagaf sfcvyslfrk sdviihkigs sepwetidpa
       61 kpqklvtisq qwrpieelee vkkltk
//
LOCUS       XP_041324756             370 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 6 superfamily member 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324756
VERSION     XP_041324756.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468822.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="transmembrane 6 superfamily member 1 isoform X1"
                     /calculated_mol_wt=41395
     Region          6..361
                     /region_name="TM6SF1-like"
                     /note="transmembrane 6 superfamily member 1, member 2, and
                     similar proteins; cd21106"
                     /db_xref="CDD:411047"
     CDS             1..370
                     /gene="TM6SF1"
                     /coded_by="XM_041468822.1:149..1261"
                     /db_xref="GeneID:121354313"
ORIGIN      
        1 msasaatgvf vlsltaipvt ylfnclaatg sswvivavgl lvlvlialsa rvlvkrkppk
       61 dplfyvyavf aftsvvnlii gleqdgiidg fmthylrege pylntayghv icywdgsahy
      121 lmyllmvaai aweqsyrtig lywlgsiims iivfmpgniv gkygakvcpa iflsmpyvcl
      181 piwagfriyn qpsathdtpv kvvqevqkkg llrrpidlml aaylilatgf cifrgmiald
      241 cpaelcrlyi qlhepyikdp aaypklqmla ymfysvpyyv ialygllvpg cswmpdltli
      301 hagglaqaqf shigaslhar tpyiyrvpee akefflilni mygilpqlfa yrcvnkpeff
      361 mkpkqeekpe
//
LOCUS       XP_041324757             188 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane 6 superfamily member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324757
VERSION     XP_041324757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="transmembrane 6 superfamily member 1 isoform X2"
                     /calculated_mol_wt=20382
     Region          6..>160
                     /region_name="TM6SF1-like"
                     /note="transmembrane 6 superfamily member 1, member 2, and
                     similar proteins; cl42080"
                     /db_xref="CDD:477942"
     CDS             1..188
                     /gene="TM6SF1"
                     /coded_by="XM_041468823.1:129..695"
                     /db_xref="GeneID:121354313"
ORIGIN      
        1 msasaatgvf vlsltaipvt ylfnclaatg sswvivavgl lvlvlialsa rvlvkrkppk
       61 dplfyvyavf aftsvvnlii gleqdgiidg fmthylrege pylntayghv icywdgsahy
      121 lmyllmvaai aweqsyrtig lywlgsiims iivfmpgniv dagihvllsa ilcdcsvwpa
      181 gawlllda
//
LOCUS       XP_041324758             203 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatoma-derived growth factor-related protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324758
VERSION     XP_041324758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..203
                     /product="hepatoma-derived growth factor-related protein
                     3"
                     /calculated_mol_wt=22475
     Region          4..96
                     /region_name="PWWP_HDGFL3"
                     /note="PWWP domain found in Hepatoma-derived growth
                     factor-related protein 3 (HDGFL3); cd20150"
                     /db_xref="CDD:438978"
     Site            order(18,20..23,76,78)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438978"
     Site            order(22,25,48)
                     /site_type="other"
                     /note="putative methyl-histone binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438978"
     Site            23..26
                     /site_type="other"
                     /note="PWWP sequence motif"
                     /db_xref="CDD:438978"
     Site            order(33..37,39..40,56)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438978"
     CDS             1..203
                     /gene="HDGFL3"
                     /coded_by="XM_041468824.1:131..742"
                     /db_xref="GeneID:121354314"
ORIGIN      
        1 marprpreyk agdlvfakmk gyphwparid elpegavkpp ankypifffg thetaflgpk
       61 dlfpykeykd kfgksnkrkg fneglweien npgvkftgyq aiqqqssset egeggntada
      121 sseeegdrve edgkgkrkne kagskrkksy tskksskqsr kspgdeddkd ckeeenksss
      181 dagdagndtr ntssdlqkts egt
//
LOCUS       XP_041324759            1292 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 592 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324759
VERSION     XP_041324759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1292
                     /product="zinc finger protein 592 isoform X1"
                     /calculated_mol_wt=142987
     Region          <181..>396
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          767..787
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(772,774,776,778..779,782..783,786,801,805..806,
                     809..810,816,831,833,835,837..838,841..842)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          795..817
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          826..844
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          848..875
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          1007..1027
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1012,1014,1016,1018..1019,1022..1023,1026,1042,1044,
                     1048..1049,1052..1053,1057,1075,1077,1079,1081..1082,
                     1085..1086)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1037..1058
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1067..1087
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1184..1210
                     /region_name="zf-C2H2_11"
                     /note="zinc-finger C2H2-type; pfam16622"
                     /db_xref="CDD:465205"
     CDS             1..1292
                     /gene="ZNF592"
                     /coded_by="XM_041468825.1:7..3885"
                     /db_xref="GeneID:121354315"
ORIGIN      
        1 mgdmktpdfd dllaafdipd ptsldaketi psageesenh lkssgmcide nvslshslpp
       61 sdapvvsviv kntsrqesfe aekegnhlgt gllhngfrgs dlpaeahalv hnygkfestf
      121 ingdssrgys dkldesksep lptfsqfspi sspepedtfk ensigdkpkh aqtpyfppps
      181 iyvptgasvl dhlrkvpepe lsmfdqyckk eqkteihcqp enrlemsrre qdraverfae
      241 sskdlldtns flgeglvfgd lphnnlgdgk gsvpelnmss sipprqrlkp thsklsscva
      301 alvalqakkv vcipksdqpn ftkepgpfkd gtkgspkmpk spksprsple vvrkagkqpe
      361 sprsvcsdss gkgspsmaag sppaipkvri ktiktssgei krtvtrilpe ndelgkssee
      421 spaetssaee fiksfpspdt savtegeagr nstkngaava iqlsnvmspy sdsmkmdian
      481 stctvslspl pncgggaikv gvkrqqpsnt atssllpkav hlanlnlvph svaasvtakt
      541 saqrrnqpqv tqmsvplvhq vkkaapvvme afhkvlhsan pvpiytpnls pppdtsinlp
      601 asgycclecg dsfalekslt qhysrrsvhi evmctqcstm llffnkcsll khardhkskg
      661 fimqcsqllm kpisidqmfs psptsssasp apqtflsssp ppkssaasgg gvgisassqp
      721 alplytdpqr lirhglkcle cnkqeqdyts laahyqrtse dnerltcqvc qmmlpnqcsy
      781 cahqrihahk spyccpecga vcrsayfqth vkenclhysr kvgfrcihcg vvfmtlamlk
      841 vhihekhcev fhkcsfcpka fksadttmah vasqhpaeph kttqviykcs cemvfnkkkl
      901 lqehfqqnts kllvgvfkcp qcqlvymqkq qlmqhvkgvh gvprnpeels nfrqksekas
      961 rnqvhtspke llvangtsps pltrkdmrve ghnpesksrl rrtgwtckec sqwisdrety
     1021 vshmkrnhgr smkrypcrqc ersfnasnsl rrhirnnhdt akkvytcwyc tdenqtfpqp
     1081 fmlenhislm hgiknpdlsq makakapern raevtdpyfh gklnakspkr maldelgrae
     1141 saagldappa kklkapwkca kcgfatdvqt efqehiprhk tdsstfqclf cglcytshis
     1201 lnrhlfivhk vkdeeeeede eeeeederqk lqiemgkngh edyngelntt veeenkykec
     1261 krdsalcehs qtcgaegpns tsqnnhsksl kt
//
LOCUS       XP_041324760            1281 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 592 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324760
VERSION     XP_041324760.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468826.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1281
                     /product="zinc finger protein 592 isoform X2"
                     /calculated_mol_wt=141714
     Region          <181..>396
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          767..787
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(772,774,776,778..779,782..783,786,801,805..806,
                     809..810,816,831,833,835,837..838,841..842)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          795..817
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          826..844
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          848..875
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          1007..1027
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(1012,1014,1016,1018..1019,1022..1023,1026,1042,1044,
                     1048..1049,1052..1053,1057,1075,1077,1079,1081..1082,
                     1085..1086)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          1037..1058
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1067..1087
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1173..1199
                     /region_name="zf-C2H2_11"
                     /note="zinc-finger C2H2-type; pfam16622"
                     /db_xref="CDD:465205"
     CDS             1..1281
                     /gene="ZNF592"
                     /coded_by="XM_041468826.1:7..3852"
                     /db_xref="GeneID:121354315"
ORIGIN      
        1 mgdmktpdfd dllaafdipd ptsldaketi psageesenh lkssgmcide nvslshslpp
       61 sdapvvsviv kntsrqesfe aekegnhlgt gllhngfrgs dlpaeahalv hnygkfestf
      121 ingdssrgys dkldesksep lptfsqfspi sspepedtfk ensigdkpkh aqtpyfppps
      181 iyvptgasvl dhlrkvpepe lsmfdqyckk eqkteihcqp enrlemsrre qdraverfae
      241 sskdlldtns flgeglvfgd lphnnlgdgk gsvpelnmss sipprqrlkp thsklsscva
      301 alvalqakkv vcipksdqpn ftkepgpfkd gtkgspkmpk spksprsple vvrkagkqpe
      361 sprsvcsdss gkgspsmaag sppaipkvri ktiktssgei krtvtrilpe ndelgkssee
      421 spaetssaee fiksfpspdt savtegeagr nstkngaava iqlsnvmspy sdsmkmdian
      481 stctvslspl pncgggaikv gvkrqqpsnt atssllpkav hlanlnlvph svaasvtakt
      541 saqrrnqpqv tqmsvplvhq vkkaapvvme afhkvlhsan pvpiytpnls pppdtsinlp
      601 asgycclecg dsfalekslt qhysrrsvhi evmctqcstm llffnkcsll khardhkskg
      661 fimqcsqllm kpisidqmfs psptsssasp apqtflsssp ppkssaasgg gvgisassqp
      721 alplytdpqr lirhglkcle cnkqeqdyts laahyqrtse dnerltcqvc qmmlpnqcsy
      781 cahqrihahk spyccpecga vcrsayfqth vkenclhysr kvgfrcihcg vvfmtlamlk
      841 vhihekhcev fhkcsfcpka fksadttmah vasqhpaeph kttqviykcs cemvfnkkkl
      901 lqehfqqnts kllvgvfkcp qcqlvymqkq qlmqhvkgvh gvprnpeels nfrqksekas
      961 rnqvhtspke llvangtsps pltrkdmrve ghnpesksrl rrtgwtckec sqwisdrety
     1021 vshmkrnhgr smkrypcrqc ersfnasnsl rrhirnnhdt akkvytcwyc tdenqtfpqp
     1081 fmlenhislm hgiknpdlsq makakapern raeakspkrm aldelgraes aagldappak
     1141 klkapwkcak cgfatdvqte fqehiprhkt dsstfqclfc glcytshisl nrhlfivhkv
     1201 kdeeeeedee eeeederqkl qiemgknghe dyngelnttv eeenkykeck rdsalcehsq
     1261 tcgaegpnst sqnnhskslk t
//
LOCUS       XP_041324761             227 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324761
VERSION     XP_041324761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..227
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X1"
                     /calculated_mol_wt=25842
     Region          38..>150
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(56,96)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..227
                     /gene="SEC11A"
                     /coded_by="XM_041468827.1:116..799"
                     /db_xref="GeneID:121354317"
ORIGIN      
        1 mlsldflddv rrmnkrqlyy qvlnfgmivs salmiwkglm vvtgsespiv vvlsgsmepa
       61 fhrgdllflt nriedpirvg eivvfriegr eipivhrvlk ihekqngdik fltkgdnnav
      121 ddrglykqgq hwlekkdvvg rargfvpyig ivtilmndyp kfkvrallfp acfsppsyns
      181 fmrtraepca lhvcccrcqc allcllcslf qyavlfllgl fvlvhre
//
LOCUS       XP_041324762             179 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324762
VERSION     XP_041324762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X2"
                     /calculated_mol_wt=20472
     Region          38..>150
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(56,96)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..179
                     /gene="SEC11A"
                     /coded_by="XM_041468828.1:94..633"
                     /db_xref="GeneID:121354317"
ORIGIN      
        1 mlsldflddv rrmnkrqlyy qvlnfgmivs salmiwkglm vvtgsespiv vvlsgsmepa
       61 fhrgdllflt nriedpirvg eivvfriegr eipivhrvlk ihekqngdik fltkgdnnav
      121 ddrglykqgq hwlekkdvvg rargfvpyig ivtilmndyp kfkyavlfll glfvlvhre
//
LOCUS       XP_041324763             174 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptidase complex catalytic subunit SEC11A isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324763
VERSION     XP_041324763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="signal peptidase complex catalytic subunit
                     SEC11A isoform X3"
                     /calculated_mol_wt=19798
     Region          38..>150
                     /region_name="Peptidase_S24_S26"
                     /note="The S24, S26 LexA/signal peptidase superfamily
                     contains LexA-related and type I signal peptidase
                     families. The S24 LexA protein domains include: the lambda
                     repressor CI/C2 family and related bacterial prophage
                     repressor proteins; LexA (EC 3.4.21.88), the...; cl10465"
                     /db_xref="CDD:447902"
     Site            order(56,96)
                     /site_type="active"
                     /note="Catalytic site [active]"
                     /db_xref="CDD:119398"
     CDS             1..174
                     /gene="SEC11A"
                     /coded_by="XM_041468829.1:94..618"
                     /db_xref="GeneID:121354317"
ORIGIN      
        1 mlsldflddv rrmnkrqlyy qvlnfgmivs salmiwkglm vvtgsespiv vvlsgsmepa
       61 fhrgdllflt nriedpirvg eivvfriegr eipivhrvlk ihekqngdik fltkgdnnav
      121 ddrglykqgq hwlekkdvvg rargfvpyig ivtilmndyp kfkvklsgql qqsq
//
LOCUS       XP_041324765             355 aa            linear   VRT 06-MAY-2021
DEFINITION  talin rod domain-containing protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324765
VERSION     XP_041324765.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468831.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="talin rod domain-containing protein 1"
                     /calculated_mol_wt=37852
     CDS             1..355
                     /gene="TLNRD1"
                     /coded_by="XM_041468831.1:1319..2386"
                     /db_xref="GeneID:121354318"
ORIGIN      
        1 masggsgkss selsgggips ssslqrkkli sicdhckikm qlvadlllls setrpvntes
       61 lsvfgesfek crdtiiartk glsilthdvq sqlnmgrfge vgeslmemge lvvsltecsa
      121 haaylaavet pgaqpampgl vdrykvtrcr hevehgcgvl kttpladmsp qlllevsqnm
      181 sknlkfltda cvlasekskd kfakeqfkls vkcmstsasa llacvkevkt spseltrnrc
      241 vlfsgplvqs vyalvgfate pqflgkaati npegkavqta ilggamsvvs acvlltqclr
      301 diaqhpesst kmsdyrerlr nsacavsdgc nllsqalrer ssprtlppvn snsvn
//
LOCUS       XP_041324766             410 aa            linear   VRT 06-MAY-2021
DEFINITION  COUP transcription factor 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324766
VERSION     XP_041324766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="COUP transcription factor 2 isoform X1"
                     /calculated_mol_wt=45406
     Region          75..147
                     /region_name="NR_DBD_COUP_TF"
                     /note="DNA-binding domain of chicken ovalbumin upstream
                     promoter transcription factors (COUP-TFs) is composed of
                     two C4-type zinc fingers; cd06958"
                     /db_xref="CDD:143516"
     Site            order(75,78,92,95,111,117,127,130)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143516"
     Site            order(84..87,93..94,96,98,101,104,112,124..125,128,131,
                     142)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143516"
     Region          173..408
                     /region_name="NR_LBD_COUP-TF"
                     /note="Ligand binding domain of chicken ovalbumin upstream
                     promoter transcription factors, a member of the nuclear
                     receptor family; cd06948"
                     /db_xref="CDD:132746"
     Site            order(207..208,212,246,250,253,267,288)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132746"
     Site            order(217,220,224,229,234..235,237..238,241..242)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132746"
     CDS             1..410
                     /gene="NR2F2"
                     /coded_by="XM_041468832.1:162..1394"
                     /db_xref="GeneID:121354319"
ORIGIN      
        1 mamvvgawrd pqddvpgaqg tqpsqappvq gppagaphtp qtpgpggpps tpaqtnppsq
       61 qnqgdkqqqq qhiecvvcgd kssgkhygqf tcegcksffk rsvrrnlsyt cranrncpid
      121 qhhrnqcqyc rlkkclkvgm rreavqrgrm pptqpthgqf altngdplnc hsylsgyisl
      181 llraepypts rfgsqcmqpn nimgienice laarmlfsav ewarnipffp dlqitdqval
      241 lrltwselfv lnaaqcsmpl hvapllaaag lhaspmsadr vvafmdhiri fqeqveklka
      301 lhvdsaeysc lkaivlftsd acglsdvahv eslqeksqca leeyvrsqyp nqptrfgkll
      361 lrlpslrtvs ssvieqlffv rlvgktpiet lirdmllsgs sfnwpymsiq
//
LOCUS       XP_041324767             281 aa            linear   VRT 06-MAY-2021
DEFINITION  COUP transcription factor 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324767
VERSION     XP_041324767.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468833.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="COUP transcription factor 2 isoform X2"
                     /calculated_mol_wt=31383
     Region          44..279
                     /region_name="NR_LBD_COUP-TF"
                     /note="Ligand binding domain of chicken ovalbumin upstream
                     promoter transcription factors, a member of the nuclear
                     receptor family; cd06948"
                     /db_xref="CDD:132746"
     Site            order(78..79,83,117,121,124,138,159)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132746"
     Site            order(88,91,95,100,105..106,108..109,112..113)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132746"
     CDS             1..281
                     /gene="NR2F2"
                     /coded_by="XM_041468833.1:459..1304"
                     /db_xref="GeneID:121354319"
ORIGIN      
        1 mqaiwdleqg kygfavqrgr mpptqpthgq faltngdpln chsylsgyis lllraepypt
       61 srfgsqcmqp nnimgienic elaarmlfsa vewarnipff pdlqitdqva llrltwself
      121 vlnaaqcsmp lhvapllaaa glhaspmsad rvvafmdhir ifqeqveklk alhvdsaeys
      181 clkaivlfts dacglsdvah veslqeksqc aleeyvrsqy pnqptrfgkl llrlpslrtv
      241 sssvieqlff vrlvgktpie tlirdmllsg ssfnwpymsi q
//
LOCUS       XP_041324768             642 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase PIAS1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324768
VERSION     XP_041324768.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468834.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="E3 SUMO-protein ligase PIAS1"
                     /calculated_mol_wt=70492
     Region          2..36
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          131..277
                     /region_name="PINIT"
                     /note="PINIT domain; pfam14324"
                     /db_xref="CDD:464136"
     Region          318..377
                     /region_name="SP-RING_PIAS1"
                     /note="SP-RING finger found in protein inhibitor of
                     activated STAT protein 1 (PIAS1) and similar proteins;
                     cd16818"
                     /db_xref="CDD:438467"
     CDS             1..642
                     /gene="PIAS1"
                     /coded_by="XM_041468834.1:296..2224"
                     /db_xref="GeneID:121354320"
ORIGIN      
        1 mvmslrvsel qvllgyagrn khgrkhellt kalhllkagc spavqmkike lyrrrfpqki
       61 mtpadlsips vhsssmpatl spstipqlgy dghpatspll pvsllgpkhe lelphltsal
      121 hpvhpdiklq klpfydllde likptslasd nsqrfretcf afaltpqqvq qisssmdisg
      181 tkcdftvqvq lrfclsetsc pqedhfppnl cvkvngkpcs lpgylpptkn gvepkrpsrp
      241 initslvrls ttvpntivvs wtaeigrnys mavylvkqls stvllqrlra kgirnpdhsr
      301 alikekltad pdseiattsl rvsllcplgk mrltipcral tcshlqcfda tlyiqmnekk
      361 ptwvcpvcdk kapyehliid glfmeilkfc tdcdeiqfke dgswapmrsk kevqevtasy
      421 ngvdgcisss mehqvsshqq snknkkvevi dltidsssde eeeepsakrs cpsispaspm
      481 nskgilnlph qaspvsrtps lpavdtsyin tsliqdyrhp fhmtpmpydl qgldffpfls
      541 gdnqhyntsl laaaaaavsa sddqellhsr ffpytssqmf ldqlnaggss slpatngsss
      601 gsnsslvssn slrdnhghpv asrsstdtas ifgiipdiis ld
//
LOCUS       XP_041324769             642 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase PIAS1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324769
VERSION     XP_041324769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="E3 SUMO-protein ligase PIAS1"
                     /calculated_mol_wt=70492
     Region          2..36
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          131..277
                     /region_name="PINIT"
                     /note="PINIT domain; pfam14324"
                     /db_xref="CDD:464136"
     Region          318..377
                     /region_name="SP-RING_PIAS1"
                     /note="SP-RING finger found in protein inhibitor of
                     activated STAT protein 1 (PIAS1) and similar proteins;
                     cd16818"
                     /db_xref="CDD:438467"
     CDS             1..642
                     /gene="PIAS1"
                     /coded_by="XM_041468835.1:66..1994"
                     /db_xref="GeneID:121354320"
ORIGIN      
        1 mvmslrvsel qvllgyagrn khgrkhellt kalhllkagc spavqmkike lyrrrfpqki
       61 mtpadlsips vhsssmpatl spstipqlgy dghpatspll pvsllgpkhe lelphltsal
      121 hpvhpdiklq klpfydllde likptslasd nsqrfretcf afaltpqqvq qisssmdisg
      181 tkcdftvqvq lrfclsetsc pqedhfppnl cvkvngkpcs lpgylpptkn gvepkrpsrp
      241 initslvrls ttvpntivvs wtaeigrnys mavylvkqls stvllqrlra kgirnpdhsr
      301 alikekltad pdseiattsl rvsllcplgk mrltipcral tcshlqcfda tlyiqmnekk
      361 ptwvcpvcdk kapyehliid glfmeilkfc tdcdeiqfke dgswapmrsk kevqevtasy
      421 ngvdgcisss mehqvsshqq snknkkvevi dltidsssde eeeepsakrs cpsispaspm
      481 nskgilnlph qaspvsrtps lpavdtsyin tsliqdyrhp fhmtpmpydl qgldffpfls
      541 gdnqhyntsl laaaaaavsa sddqellhsr ffpytssqmf ldqlnaggss slpatngsss
      601 gsnsslvssn slrdnhghpv asrsstdtas ifgiipdiis ld
//
LOCUS       XP_041324770             642 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase PIAS1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324770
VERSION     XP_041324770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="E3 SUMO-protein ligase PIAS1"
                     /calculated_mol_wt=70492
     Region          2..36
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          131..277
                     /region_name="PINIT"
                     /note="PINIT domain; pfam14324"
                     /db_xref="CDD:464136"
     Region          318..377
                     /region_name="SP-RING_PIAS1"
                     /note="SP-RING finger found in protein inhibitor of
                     activated STAT protein 1 (PIAS1) and similar proteins;
                     cd16818"
                     /db_xref="CDD:438467"
     CDS             1..642
                     /gene="PIAS1"
                     /coded_by="XM_041468836.1:121..2049"
                     /db_xref="GeneID:121354320"
ORIGIN      
        1 mvmslrvsel qvllgyagrn khgrkhellt kalhllkagc spavqmkike lyrrrfpqki
       61 mtpadlsips vhsssmpatl spstipqlgy dghpatspll pvsllgpkhe lelphltsal
      121 hpvhpdiklq klpfydllde likptslasd nsqrfretcf afaltpqqvq qisssmdisg
      181 tkcdftvqvq lrfclsetsc pqedhfppnl cvkvngkpcs lpgylpptkn gvepkrpsrp
      241 initslvrls ttvpntivvs wtaeigrnys mavylvkqls stvllqrlra kgirnpdhsr
      301 alikekltad pdseiattsl rvsllcplgk mrltipcral tcshlqcfda tlyiqmnekk
      361 ptwvcpvcdk kapyehliid glfmeilkfc tdcdeiqfke dgswapmrsk kevqevtasy
      421 ngvdgcisss mehqvsshqq snknkkvevi dltidsssde eeeepsakrs cpsispaspm
      481 nskgilnlph qaspvsrtps lpavdtsyin tsliqdyrhp fhmtpmpydl qgldffpfls
      541 gdnqhyntsl laaaaaavsa sddqellhsr ffpytssqmf ldqlnaggss slpatngsss
      601 gsnsslvssn slrdnhghpv asrsstdtas ifgiipdiis ld
//
LOCUS       XP_041324771             642 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase PIAS1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324771
VERSION     XP_041324771.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468837.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="E3 SUMO-protein ligase PIAS1"
                     /calculated_mol_wt=70492
     Region          2..36
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          131..277
                     /region_name="PINIT"
                     /note="PINIT domain; pfam14324"
                     /db_xref="CDD:464136"
     Region          318..377
                     /region_name="SP-RING_PIAS1"
                     /note="SP-RING finger found in protein inhibitor of
                     activated STAT protein 1 (PIAS1) and similar proteins;
                     cd16818"
                     /db_xref="CDD:438467"
     CDS             1..642
                     /gene="PIAS1"
                     /coded_by="XM_041468837.1:26..1954"
                     /db_xref="GeneID:121354320"
ORIGIN      
        1 mvmslrvsel qvllgyagrn khgrkhellt kalhllkagc spavqmkike lyrrrfpqki
       61 mtpadlsips vhsssmpatl spstipqlgy dghpatspll pvsllgpkhe lelphltsal
      121 hpvhpdiklq klpfydllde likptslasd nsqrfretcf afaltpqqvq qisssmdisg
      181 tkcdftvqvq lrfclsetsc pqedhfppnl cvkvngkpcs lpgylpptkn gvepkrpsrp
      241 initslvrls ttvpntivvs wtaeigrnys mavylvkqls stvllqrlra kgirnpdhsr
      301 alikekltad pdseiattsl rvsllcplgk mrltipcral tcshlqcfda tlyiqmnekk
      361 ptwvcpvcdk kapyehliid glfmeilkfc tdcdeiqfke dgswapmrsk kevqevtasy
      421 ngvdgcisss mehqvsshqq snknkkvevi dltidsssde eeeepsakrs cpsispaspm
      481 nskgilnlph qaspvsrtps lpavdtsyin tsliqdyrhp fhmtpmpydl qgldffpfls
      541 gdnqhyntsl laaaaaavsa sddqellhsr ffpytssqmf ldqlnaggss slpatngsss
      601 gsnsslvssn slrdnhghpv asrsstdtas ifgiipdiis ld
//
LOCUS       XP_041324773             642 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 SUMO-protein ligase PIAS1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324773
VERSION     XP_041324773.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468839.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="E3 SUMO-protein ligase PIAS1"
                     /calculated_mol_wt=70492
     Region          2..36
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          131..277
                     /region_name="PINIT"
                     /note="PINIT domain; pfam14324"
                     /db_xref="CDD:464136"
     Region          318..377
                     /region_name="SP-RING_PIAS1"
                     /note="SP-RING finger found in protein inhibitor of
                     activated STAT protein 1 (PIAS1) and similar proteins;
                     cd16818"
                     /db_xref="CDD:438467"
     CDS             1..642
                     /gene="PIAS1"
                     /coded_by="XM_041468839.1:173..2101"
                     /db_xref="GeneID:121354320"
ORIGIN      
        1 mvmslrvsel qvllgyagrn khgrkhellt kalhllkagc spavqmkike lyrrrfpqki
       61 mtpadlsips vhsssmpatl spstipqlgy dghpatspll pvsllgpkhe lelphltsal
      121 hpvhpdiklq klpfydllde likptslasd nsqrfretcf afaltpqqvq qisssmdisg
      181 tkcdftvqvq lrfclsetsc pqedhfppnl cvkvngkpcs lpgylpptkn gvepkrpsrp
      241 initslvrls ttvpntivvs wtaeigrnys mavylvkqls stvllqrlra kgirnpdhsr
      301 alikekltad pdseiattsl rvsllcplgk mrltipcral tcshlqcfda tlyiqmnekk
      361 ptwvcpvcdk kapyehliid glfmeilkfc tdcdeiqfke dgswapmrsk kevqevtasy
      421 ngvdgcisss mehqvsshqq snknkkvevi dltidsssde eeeepsakrs cpsispaspm
      481 nskgilnlph qaspvsrtps lpavdtsyin tsliqdyrhp fhmtpmpydl qgldffpfls
      541 gdnqhyntsl laaaaaavsa sddqellhsr ffpytssqmf ldqlnaggss slpatngsss
      601 gsnsslvssn slrdnhghpv asrsstdtas ifgiipdiis ld
//
LOCUS       XP_041324774             630 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent Clp protease ATP-binding subunit clpX-like,
            mitochondrial isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324774
VERSION     XP_041324774.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468840.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..630
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     clpX-like, mitochondrial isoform X1"
                     /calculated_mol_wt=68896
     Region          101..129
                     /region_name="Zn-ribbon"
                     /note="C-terminal zinc ribbon domain of RNA polymerase
                     intrinsic transcript cleavage subunit; cl02609"
                     /db_xref="CDD:445850"
     Site            order(102,105,124,127)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259791"
     Region          169..602
                     /region_name="ClpX"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1219"
                     /db_xref="CDD:440832"
     CDS             1..630
                     /gene="CLPX"
                     /coded_by="XM_041468840.1:88..1980"
                     /db_xref="GeneID:121354322"
ORIGIN      
        1 msachscaaa arlfgstlps arrgitcgrt ripvlgklgt fetcslkrip lrnfsetpay
       61 faskdgaskd gsgdgskksv gegggkksss gssgkggnql rcpkcgdlct hvetfvsstr
      121 fvkcekchhf fvvlseadtk ksiikepesa aeavklafqq kpppppkkiy nyldkyvvgq
      181 cfakkvlsva vynhykriyn nipsnmrqqa evekqtsltp releirrred eyrftkllqi
      241 agisphgnal gasmqqqmnq qipqekrgge vldsanddik leksnilllg ptgsgktlla
      301 qtlakcldvp faicdcttlt qagyvgedie sviakllqda nyniekaqqg ivfldevdki
      361 gsvpgihqlr dvggegvqqg llkllegtiv nvpeknsrkl rgetvqvdtt nilfvasgaf
      421 ngldriisrr knekylgfgt psnmgkgrra aaaadlanis gesdpqedie ekdrllrhve
      481 ardliefgmi pefvgrlpvv vplhsldekt lvrilteprn avvpqyqalf smdkcelnvt
      541 edalkaiarl aldrktgarg lrsimeklll epmfevpnsd ivcvevdkdv vegkkepgyi
      601 raptkdssee eydsgveeeg wprqadaanh
//
LOCUS       XP_041324775             616 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent Clp protease ATP-binding subunit clpX-like,
            mitochondrial isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324775
VERSION     XP_041324775.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468841.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..616
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     clpX-like, mitochondrial isoform X2"
                     /calculated_mol_wt=67003
     Region          101..129
                     /region_name="Zn-ribbon"
                     /note="C-terminal zinc ribbon domain of RNA polymerase
                     intrinsic transcript cleavage subunit; cl02609"
                     /db_xref="CDD:445850"
     Site            order(102,105,124,127)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259791"
     Region          169..588
                     /region_name="ClpX"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1219"
                     /db_xref="CDD:440832"
     CDS             1..616
                     /gene="CLPX"
                     /coded_by="XM_041468841.1:88..1938"
                     /db_xref="GeneID:121354322"
ORIGIN      
        1 msachscaaa arlfgstlps arrgitcgrt ripvlgklgt fetcslkrip lrnfsetpay
       61 faskdgaskd gsgdgskksv gegggkksss gssgkggnql rcpkcgdlct hvetfvsstr
      121 fvkcekchhf fvvlseadtk ksiikepesa aeavklafqq kpppppkkiy nyldkyvvgq
      181 cfakkvlsva vynhykriyn nipsnmrqqa evekqtsltp rellqiagis phgnalgasm
      241 qqqmnqqipq ekrggevlds anddikleks nilllgptgs gktllaqtla kcldvpfaic
      301 dcttltqagy vgediesvia kllqdanyni ekaqqgivfl devdkigsvp gihqlrdvgg
      361 egvqqgllkl legtivnvpe knsrklrget vqvdttnilf vasgafngld riisrrknek
      421 ylgfgtpsnm gkgrraaaaa dlanisgesd pqedieekdr llrhveardl iefgmipefv
      481 grlpvvvplh sldektlvri lteprnavvp qyqalfsmdk celnvtedal kaiarlaldr
      541 ktgarglrsi meklllepmf evpnsdivcv evdkdvvegk kepgyirapt kdsseeeyds
      601 gveeegwprq adaanh
//
LOCUS       XP_041324776             601 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent Clp protease ATP-binding subunit clpX-like,
            mitochondrial isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324776
VERSION     XP_041324776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..601
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     clpX-like, mitochondrial isoform X3"
                     /calculated_mol_wt=65709
     Region          101..129
                     /region_name="Zn-ribbon"
                     /note="C-terminal zinc ribbon domain of RNA polymerase
                     intrinsic transcript cleavage subunit; cl02609"
                     /db_xref="CDD:445850"
     Site            order(102,105,124,127)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:259791"
     Region          169..601
                     /region_name="ClpX"
                     /note="ATP-dependent protease Clp, ATPase subunit ClpX
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG1219"
                     /db_xref="CDD:440832"
     CDS             1..601
                     /gene="CLPX"
                     /coded_by="XM_041468842.1:88..1893"
                     /db_xref="GeneID:121354322"
ORIGIN      
        1 msachscaaa arlfgstlps arrgitcgrt ripvlgklgt fetcslkrip lrnfsetpay
       61 faskdgaskd gsgdgskksv gegggkksss gssgkggnql rcpkcgdlct hvetfvsstr
      121 fvkcekchhf fvvlseadtk ksiikepesa aeavklafqq kpppppkkiy nyldkyvvgq
      181 cfakkvlsva vynhykriyn nipsnmrqqa evekqtsltp releirrred eyrftkllqi
      241 agisphgnal gasmqqqmnq qipqekrgge vldsanddik leksnilllg ptgsgktlla
      301 qtlakcldvp faicdcttlt qagyvgedie sviakllqda nyniekaqqg ivfldevdki
      361 gsvpgihqlr dvggegvqqg llkllegtiv nvpeknsrkl rgetvqvdtt nilfvasgaf
      421 ngldriisrr knekylgfgt psnmgkgrra aaaadlanis gesdpqedie ekdrllrhve
      481 ardliefgmi pefvgrlpvv vplhsldekt lvrilteprn avvpqyqalf smdkcelnvt
      541 edalkaiarl aldrktgarg lrsimeklll epmfevpnsd ivcvevdkdv vegkkepgyi
      601 r
//
LOCUS       XP_041324778             554 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronan and proteoglycan link protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324778
VERSION     XP_041324778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468844.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="hyaluronan and proteoglycan link protein 3
                     isoform X1"
                     /calculated_mol_wt=60951
     Region          245..364
                     /region_name="Ig_LP_like"
                     /note="Immunoglobulin (Ig)-like domain of human cartilage
                     link protein (LP), and similar domains; cd05877"
                     /db_xref="CDD:409461"
     Region          245..248
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409461"
     Region          251..253
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409461"
     Region          257..265
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409461"
     Region          278..284
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409461"
     Region          291..294
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409461"
     Region          302..305
                     /region_name="putative Ig strand C'"
                     /note="putative Ig strand C' [structural motif]"
                     /db_xref="CDD:409461"
     Region          310..315
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409461"
     Region          324..330
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409461"
     Region          338..345
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409461"
     Region          355..364
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409461"
     Region          362..456
                     /region_name="Link_domain_HAPLN_module_1"
                     /note="this link domain is found in the first link module
                     of proteins similar to the vertebrate HAPLN (hyaluronan/HA
                     and proteoglycan binding link) protein family which
                     includes cartilage link protein. The link domain is a
                     HA-binding domain. HAPLNs contain two...; cd03518"
                     /db_xref="CDD:239595"
     Site            372..373
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239595"
     Region          463..551
                     /region_name="Link_domain_HAPLN_module_2"
                     /note="this link domain is found in the second link module
                     of proteins similar to the vertebrate HAPLN (hyaluronan/HA
                     and proteoglycan binding link) protein family which
                     includes cartilage link protein. The link domain is a
                     HA-binding domain. HAPLNs contain two...; cd03519"
                     /db_xref="CDD:239596"
     Site            470..471
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239596"
     CDS             1..554
                     /gene="HAPLN3"
                     /coded_by="XM_041468844.1:3654..5318"
                     /db_xref="GeneID:121354323"
ORIGIN      
        1 malpwrepgi taigarhhca gccsttltal qlralatlhv tatlgsggvt rhwgaggpgl
       61 mpcrprceaa vprahpaarg qhvavsprlr cqqrrasvpa agavpalqrv hpappgtgsa
      121 gpsgwqvwlh pmvsrgtdcr rksgieqpav gaacftpptl estteprvgp frvehllshs
      181 plalaracfp amlllplllk vtllplasgs yhpfyngfyy nhimndngde qdkvdyfsgs
      241 klvveaskdp vysynganvt lpchyryepd lepkrkirik wsklrddytk eqdvmvaigk
      301 tyvafgdfkg rahirqagea swheaslvis dvrlkddgky rcevidgled esdvvdlrlq
      361 givfpyqppr gqyrlnfhea eqvcqdqgai lanfnqlfqa wsegldwcna gwladgtvqy
      421 pirlprkpcg gvhlapgirs ygprhrhlhr fdafcfssal kgevfyldrl agmtleeakq
      481 scqdagaeia rvgqlysawk fvgldrcnag wladgsvryp ivtprancgp aepgvrsfgf
      541 prkgrfgvfc yrer
//
LOCUS       XP_041324779             363 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronan and proteoglycan link protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324779
VERSION     XP_041324779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="hyaluronan and proteoglycan link protein 3
                     isoform X2"
                     /calculated_mol_wt=41038
     Region          54..173
                     /region_name="Ig_LP_like"
                     /note="Immunoglobulin (Ig)-like domain of human cartilage
                     link protein (LP), and similar domains; cd05877"
                     /db_xref="CDD:409461"
     Region          54..57
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409461"
     Region          60..62
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409461"
     Region          66..74
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409461"
     Region          87..93
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409461"
     Region          100..103
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409461"
     Region          111..114
                     /region_name="putative Ig strand C'"
                     /note="putative Ig strand C' [structural motif]"
                     /db_xref="CDD:409461"
     Region          119..124
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409461"
     Region          133..139
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409461"
     Region          147..154
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409461"
     Region          164..173
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409461"
     Region          171..265
                     /region_name="Link_domain_HAPLN_module_1"
                     /note="this link domain is found in the first link module
                     of proteins similar to the vertebrate HAPLN (hyaluronan/HA
                     and proteoglycan binding link) protein family which
                     includes cartilage link protein. The link domain is a
                     HA-binding domain. HAPLNs contain two...; cd03518"
                     /db_xref="CDD:239595"
     Site            181..182
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239595"
     Region          272..360
                     /region_name="Link_domain_HAPLN_module_2"
                     /note="this link domain is found in the second link module
                     of proteins similar to the vertebrate HAPLN (hyaluronan/HA
                     and proteoglycan binding link) protein family which
                     includes cartilage link protein. The link domain is a
                     HA-binding domain. HAPLNs contain two...; cd03519"
                     /db_xref="CDD:239596"
     Site            279..280
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239596"
     CDS             1..363
                     /gene="HAPLN3"
                     /coded_by="XM_041468845.1:3584..4675"
                     /db_xref="GeneID:121354323"
ORIGIN      
        1 mlllplllkv tllplasgsy hpfyngfyyn himndngdeq dkvdyfsgsk lvveaskdpv
       61 ysynganvtl pchyryepdl epkrkirikw sklrddytke qdvmvaigkt yvafgdfkgr
      121 ahirqageas wheaslvisd vrlkddgkyr cevidglede sdvvdlrlqg ivfpyqpprg
      181 qyrlnfheae qvcqdqgail anfnqlfqaw segldwcnag wladgtvqyp irlprkpcgg
      241 vhlapgirsy gprhrhlhrf dafcfssalk gevfyldrla gmtleeakqs cqdagaeiar
      301 vgqlysawkf vgldrcnagw ladgsvrypi vtprancgpa epgvrsfgfp rkgrfgvfcy
      361 rer
//
LOCUS       XP_041324780             474 aa            linear   VRT 06-MAY-2021
DEFINITION  lactadherin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324780
VERSION     XP_041324780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="lactadherin isoform X1"
                     /calculated_mol_wt=52995
     Region          28..58
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          69..105
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          109..144
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(109,112,126)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          152..303
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(196,224,231)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     Region          317..471
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(364,392,399)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     CDS             1..474
                     /gene="MFGE8"
                     /coded_by="XM_041468846.1:87..1511"
                     /db_xref="GeneID:121354324"
ORIGIN      
        1 msaarlfrvl lavavafpll lvvsgdfcdv nhcqnggtcl tgineapffc icpegyvgid
       61 cnetekgpch pnpchnngec qlvpnrgdvf tdyickcpag ydgvhcqnnk necssqpckn
      121 ggtcldldgd ytckcpspfl gktchsrcav llgmeggais daqlsassvy ygflglqrwg
      181 pelarlnnhg ivnawtssny dkspwiqanl lrkmrlsgii tqgarrvgqq efvraykvay
      241 sldgreftff kdekkdvdkv fegnmdygtm rtnmfnppit aqfiriypvm crractlrfe
      301 ligcemnvyf ntagcseplg mksrlisdqq itassvfktw gidaftwhph yarldmtgkt
      361 nawtalnndq sewlqidlrd qkkvtgiitq gardfghiqy vaaykvaysd ngtswtlyrd
      421 aqtnstkifh gnsdnyshkk nvfdvpfyar yvrilpvawn nritlrvell gcde
//
LOCUS       XP_041324781             468 aa            linear   VRT 06-MAY-2021
DEFINITION  lactadherin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324781
VERSION     XP_041324781.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468847.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..468
                     /product="lactadherin isoform X2"
                     /calculated_mol_wt=52300
     Region          28..58
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          69..105
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          109..144
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(109,112,126)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          152..303
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(196,224,231)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     Region          311..465
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(358,386,393)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     CDS             1..468
                     /gene="MFGE8"
                     /coded_by="XM_041468847.1:86..1492"
                     /db_xref="GeneID:121354324"
ORIGIN      
        1 msaarlfrvl lavavafpll lvvsgdfcdv nhcqnggtcl tgineapffc icpegyvgid
       61 cnetekgpch pnpchnngec qlvpnrgdvf tdyickcpag ydgvhcqnnk necssqpckn
      121 ggtcldldgd ytckcpspfl gktchsrcav llgmeggais daqlsassvy ygflglqrwg
      181 pelarlnnhg ivnawtssny dkspwiqanl lrkmrlsgii tqgarrvgqq efvraykvay
      241 sldgreftff kdekkdvdkv fegnmdygtm rtnmfnppit aqfiriypvm crractlrfe
      301 ligcemngcs eplgmksrli sdqqitassv fktwgidaft whphyarldm tgktnawtal
      361 nndqsewlqi dlrdqkkvtg iitqgardfg hiqyvaaykv aysdngtswt lyrdaqtnst
      421 kifhgnsdny shkknvfdvp fyaryvrilp vawnnritlr vellgcde
//
LOCUS       XP_041324782             432 aa            linear   VRT 06-MAY-2021
DEFINITION  lactadherin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324782
VERSION     XP_041324782.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468848.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="lactadherin isoform X3"
                     /calculated_mol_wt=48498
     Region          27..63
                     /region_name="EGF"
                     /note="EGF-like domain; pfam00008"
                     /db_xref="CDD:394967"
     Region          67..102
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(67,70,84)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          110..261
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(154,182,189)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     Region          275..429
                     /region_name="FA58C"
                     /note="Coagulation factor 5/8 C-terminal domain, discoidin
                     domain; Cell surface-attached carbohydrate-binding domain,
                     present in eukaryotes and assumed to have horizontally
                     transferred to eubacterial genomes; cd00057"
                     /db_xref="CDD:238014"
     Site            order(322,350,357)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:238014"
     CDS             1..432
                     /gene="MFGE8"
                     /coded_by="XM_041468848.1:88..1386"
                     /db_xref="GeneID:121354324"
ORIGIN      
        1 msaarlfrvl lavavafpll lvvsgpchpn pchnngecql vpnrgdvftd yickcpagyd
       61 gvhcqnnkne cssqpckngg tcldldgdyt ckcpspflgk tchsrcavll gmeggaisda
      121 qlsassvyyg flglqrwgpe larlnnhgiv nawtssnydk spwiqanllr kmrlsgiitq
      181 garrvgqqef vraykvaysl dgreftffkd ekkdvdkvfe gnmdygtmrt nmfnppitaq
      241 firiypvmcr ractlrfeli gcemnvyfnt agcseplgmk srlisdqqit assvfktwgi
      301 daftwhphya rldmtgktna wtalnndqse wlqidlrdqk kvtgiitqga rdfghiqyva
      361 aykvaysdng tswtlyrdaq tnstkifhgn sdnyshkknv fdvpfyaryv rilpvawnnr
      421 itlrvellgc de
//
LOCUS       XP_041324783            2747 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041324783
VERSION     XP_041324783.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468849.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2747
                     /product="A-kinase anchor protein 13"
                     /calculated_mol_wt=297635
     Region          <143..225
                     /region_name="PHA02736"
                     /note="Viral ankyrin protein; Provisional"
                     /db_xref="CDD:165103"
     Region          637..>861
                     /region_name="PHA03169"
                     /note="hypothetical protein; Provisional"
                     /db_xref="CDD:223003"
     Region          <735..1105
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          1713..1767
                     /region_name="C1_AKAP13"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in A-kinase anchor protein 13 (AKAP-13) and similar
                     proteins; cd20878"
                     /db_xref="CDD:410428"
     Region          1916..2110
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous
                     (DH) domain. It appears that PH domains invariably occur
                     C-terminal to RhoGEF/DH domains; cd00160"
                     /db_xref="CDD:238091"
     Site            order(1922,1926,2033,2061..2062,2065..2066,2068..2069,
                     2072..2073,2076..2077,2080,2106,2110)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          2153..2255
                     /region_name="PH_AKAP13"
                     /note="A-kinase anchoring protein 13 Pleckstrin homology
                     (PH) domain; cd13392"
                     /db_xref="CDD:275427"
     Region          <2481..>2622
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..2747
                     /gene="AKAP13"
                     /coded_by="XM_041468849.1:192..8435"
                     /db_xref="GeneID:121354325"
ORIGIN      
        1 mklnpqqapl ygdsvitvql teedkveddv vfylvftgst vqhctstrki npgsletisp
       61 ghdccetvkv alcasreghp vlvvaeesfq fvqdeaydaa qflatcagnq qalnftrfld
      121 rsrppaadvd fldekvalaf rhlklpaewn vlgadqslte nipretlmhf avrlgllrlt
      181 wfllqqpggr galsihnneg atpvslaler gyqklhqllt eegarepdsw stlshtvhsg
      241 dysvkhhrgl dvylltaeak egtaaswerd iqhlqmhmqs hqhqslrqqt epvlgdsgds
      301 cakgaeghmt ttsqsleema reerqenpsd lvhldigqls dqtqqeekcn ssslgafnda
      361 tkdmvspgga nspaslcesk nteilckkeg eaglrsaegs gtisdedths svslcasvng
      421 avnlpcsgnt neeagmtsag ivldqagvgs tdsahqevqt aeelavsaaa vaaaagdtpa
      481 slggldvamg qtecrncaga perakgqrra edglaepger taklgekypa keelsstaqp
      541 llsgfngtec sdgedanvgv vpacdganag gdigsvsvdl cktgsnketd vdsctaqvng
      601 dftenqgdas vtarqevsas taealpavng vqvpactskp aaglevhgss esgeqevlve
      661 agctdgkssl pslegsvetd gpgaepenrd vggsnesgae aahcqesgei adhgaaates
      721 sdkepvgtdt sscrdggskd sasgdqevaa capsaaqtgv kgemgnsfnp dtaqqgeree
      781 repasllped tstglaekep aqagaekaes tseqegwssk vespsplprg egpavsqegd
      841 aavappgqea alqgndpgsa pcakgadcav dnligtpsat hneeskqkqe avaaragsae
      901 lawqhggehg gvaapwpgdr agdegspgqg hsqqveggka epeqeahvng seqvlsedll
      961 aavvkpsacs lggpvvgssn vdaglkathq peedckagaa aaaegtmhgp asadeslgae
     1021 sdpcpnagln qeqdptetlq gmsphsstpe lkdaseagap sdacqgkevp rpvtiapvav
     1081 yaeeqedtes vlpraalqpi aeeptcdsds stdtvcpagd sdtapaltga qgealaepdg
     1141 kqspavpavp fspcschlqa veslenvgvk slvsangass ldkvpkmvks fdavvfaaet
     1201 pcfpevpaae kvglepqtav daraslngqm dcsssakkkn vslavqgaep vtgmlemkte
     1261 devdfqknct eevinrgswc plepcpdpsl lerkrtrdsp ecenfledgl svcassqggl
     1321 kresgcesdl fplpgdgmed lvfgkqpeee qsacdvtsss ssaddtmsle rnsslgsdts
     1381 lpfppvgsfa qpkdrhsldg sctnmvsseg gekeeeldsi tdvptpssvl rgsmrplspf
     1441 rrhswgpgkn atneaeinqr ssmrilgdgi kkppihrrsl swcpsgvqyi amgpdftcrs
     1501 ysleglagds genkkpstnl easslsskdl rrsplasnqs lvllteeleq geirdynhqv
     1561 hqasqpqgfn fsssavsspl tksmslmsis kpvldtqgrt rpsrrisfsf sisplipksk
     1621 tlfsigssss deeeeldsaq sfggsmgssv qsiseesssv sagkgvtkvs rtfsylrnkm
     1681 ssskkskeke kdkektkekd kdskekekdk kllnghlfta tsvvaqatcy hcmkpfnkds
     1741 yycancnaiv hkgckenfas cakvkmkpqr gmlqahdtss lptvtmrnks sqpkerprsa
     1801 ilapdestva stfsnrrsqq ptalsksvsi qniagvgndd slihtwkfls qstdslhkis
     1861 rvnesmeslv degadmnegq lmgdleldsk qleaeswsqa vdskflqqqy kdvvkrqdvi
     1921 yelmqtemhh vrtlkimndv ysaamlkelq ydqqvvdkif pclenllhih sqffqriler
     1981 kkesladkse knfvirrigd ilvnqfsgen aermkktygk fcghhneavn yfkelfskek
     2041 rfqafvkkkm ssslvrrlgi pecillvtqr itkypvllqr ilqytkendv ehedltqsln
     2101 lvkdviaavn skvskyekkk rleeiysrtd sksimrmksg qmfaredlsr rklirdgpvs
     2161 lkssggrlke vqavllsdml vflqekdqky vfasldqkst vislkklivr evaheekglf
     2221 lismggkdpe mvevhasske erngwiqiiq dtmhtmdrde degvpcesef ekklsdakvr
     2281 glkeqlqqkd kqilvlleek tkifqdmads svqeetpssr llfranteea pkgeeimkta
     2341 inevellqhl vsrslgtalg qqvsstamdq eggvgpislp rraetfggfd shqmnaskak
     2401 qkggvsscre vegprtwrrr aggakdegdd aqdlrrtesd silkkggnan lmfmmkrdke
     2461 qvlqtitslh klltalqgvv lqqdtyiedq klalserass rgffrpasll eqekqrnlek
     2521 qrqelanlkk qqtqhqeerr rrekewevre kelaeheael aqreeqvqrl rqelereree
     2581 lqvkkaayql dlerlrtaqk qlerekvqlk qdlerfaqmr qepdhnqvsn lheklarvss
     2641 qsstdessmq knpslpkqgh fdaelsvspk rnslsrthke kstfhllstt nqtnkaaeeq
     2701 tqmptrlfsl akpkekkekk kkgrghrsqq sdshsseapp egeeifc
//
LOCUS       XP_041324784             448 aa            linear   VRT 06-MAY-2021
DEFINITION  serine beta-lactamase-like protein LACTB, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324784
VERSION     XP_041324784.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468850.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="serine beta-lactamase-like protein LACTB,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=50526
     Region          12..397
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
     CDS             1..448
                     /gene="LACTB"
                     /coded_by="XM_041468850.1:72..1418"
                     /db_xref="GeneID:121354326"
ORIGIN      
        1 mgwqpactyn wdeagipgil vgvsvdgkev wseglgyadv enrvvckpet imriasiskc
       61 ltmmavaklw eegkldldap vqkyvpefpe kvyegekvti ttrqlvshls girhyekdit
      121 kvkeekekan ralkltkshq dkeqkakegk gtentdcvkq kkehdsetkr rnskpgrndk
      181 efeqeeyylk ekfesviesl kifkndplff kpgsqflyst ygftllsavv erasgqkftd
      241 ymlkmfrdld mlstvlddne amiynrarcy iynkkgrlvn apyvdnsykw agggflssvg
      301 dllkfgnall ysyqagqfkn knakllpgyl kpstvammwt pvpktevswd rdgkyamawa
      361 vveknqqygc crqqrhyash tggavgassv llilpeeldp eavgtwpvap prgvivtiic
      421 nmqsvslnst alkiarefdk ekraqsvg
//
LOCUS       XP_041324785             397 aa            linear   VRT 06-MAY-2021
DEFINITION  serine beta-lactamase-like protein LACTB, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324785
VERSION     XP_041324785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..397
                     /product="serine beta-lactamase-like protein LACTB,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=45004
     Region          1..346
                     /region_name="AmpC"
                     /note="CubicO group peptidase, beta-lactamase class C
                     family [Defense mechanisms]; COG1680"
                     /db_xref="CDD:441286"
     CDS             1..397
                     /gene="LACTB"
                     /coded_by="XM_041468851.1:484..1677"
                     /db_xref="GeneID:121354326"
ORIGIN      
        1 mriasiskcl tmmavaklwe egkldldapv qkyvpefpek vyegekvtit trqlvshlsg
       61 irhyekditk vkeekekanr alkltkshqd keqkakegkg tentdcvkqk kehdsetkrr
      121 nskpgrndke feqeeyylke kfesvieslk ifkndplffk pgsqflysty gftllsavve
      181 rasgqkftdy mlkmfrdldm lstvlddnea miynrarcyi ynkkgrlvna pyvdnsykwa
      241 gggflssvgd llkfgnally syqagqfknk nakllpgylk pstvammwtp vpktevswdr
      301 dgkyamawav veknqqygcc rqqrhyasht ggavgassvl lilpeeldpe avgtwpvapp
      361 rgvivtiicn mqsvslnsta lkiarefdke kraqsvg
//
LOCUS       XP_041324787              84 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S27-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324787
VERSION     XP_041324787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="40S ribosomal protein S27-like"
                     /calculated_mol_wt=9318
     Region          6..82
                     /region_name="PLN00209"
                     /note="ribosomal protein S27; Provisional"
                     /db_xref="CDD:165774"
     CDS             1..84
                     /gene="RPS27L"
                     /coded_by="XM_041468853.1:212..466"
                     /db_xref="GeneID:121354327"
ORIGIN      
        1 mplakdlvhp sledekrkhk kkrlvqspns yfmdvkcpgc ykittvfsha qtvvlcvgcs
       61 tvlcqptggk arltegcsfr rkqh
//
LOCUS       XP_041324788            1096 aa            linear   VRT 06-MAY-2021
DEFINITION  selenocysteine insertion sequence-binding protein 2-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324788
VERSION     XP_041324788.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468854.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1096
                     /product="selenocysteine insertion sequence-binding
                     protein 2-like isoform X1"
                     /calculated_mol_wt=120707
     Region          700..802
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     pfam01248"
                     /db_xref="CDD:426153"
     CDS             1..1096
                     /gene="SECISBP2L"
                     /coded_by="XM_041468854.1:189..3479"
                     /db_xref="GeneID:121354328"
ORIGIN      
        1 mdkadknvkl saevepfipq kkgpetlmip malpndsggi ngmeptpips ylitcypfvq
       61 enqsnrqfpl ynndirwqqp spnpagpyla ypiisaqppv steytyyqlm papcaqvmgf
      121 yhpfptpypa pfqtanavst vttecterps psgqvfplst qrsrssnrgp vmqkqqqlqm
      181 hikskrppvk nvatqketss sgpenrskiv llvdasqqtd fpsdianksl sesastmlwk
      241 skgrrrrtsh paaessseqg aseadidsds gycspkhgnn qaaamasrnt dscamnvvep
      301 sinttgigwt nvnsqatqkk pwiektptfs rggrqaeqrn npqsgfrcrd hstssermqg
      361 lqkrhekpla tsqtsraeqs peplyfeded efpelnsdng ssksssiqqk ispkvlddlp
      421 enspinivqt pipittsvpk raksqkkkal aaalataqey seismeqkkl qealskaagk
      481 ksktpvqldl gdmlaalekq qqamkarqit ntrplsytvg saapfhtkes asrksltkgq
      541 psmgclnpld stapkvkrgk ereiaklkrp talkkiilke reekkgrlsa dhsllgsdeq
      601 keahlnlsad qsqelasqee tglsmpsdts lspasqnspy cmtpvsqgsp assgigspma
      661 ssaitkihsk rfreycnqvl skeidecvtl llqelvsfqe riyqkdptra karrrlvmgl
      721 revtkhmkln kikcviispn cekiqskggl dealynviam areqeipfvf algrkalgrc
      781 vnklvpvsvv gifnysgaed lfnklvslte earkayrdmv aameqeqaee alknvkkaph
      841 hmghsrnpsa asaisfcsvi sepisevnek eyetnwrnmv etsdgletse neresvckaa
      901 vpekvgngqm ekttlnkqpp lattgttsat nhgkstpgdk devkpddnle wasqqstetg
      961 sldgscrdll nssmtsttst lvpgmleeee eeeddddedy thepisvevq lnsrieswvs
     1021 etqrtmetlq lgktlsgaee dnaeqseeee metseqadpi tdgeewtndk hasntqhkpt
     1081 icsslnkeht dsiymp
//
LOCUS       XP_041324789            1095 aa            linear   VRT 06-MAY-2021
DEFINITION  selenocysteine insertion sequence-binding protein 2-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324789
VERSION     XP_041324789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1095
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1095
                     /product="selenocysteine insertion sequence-binding
                     protein 2-like isoform X2"
                     /calculated_mol_wt=120578
     Region          699..801
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     pfam01248"
                     /db_xref="CDD:426153"
     CDS             1..1095
                     /gene="SECISBP2L"
                     /coded_by="XM_041468855.1:189..3476"
                     /db_xref="GeneID:121354328"
ORIGIN      
        1 mdkadknvkl saevepfipq kkgpetlmip malpndsggi ngmeptpips ylitcypfvq
       61 enqsnrqfpl ynndirwqqp spnpagpyla ypiisaqppv steytyyqlm papcaqvmgf
      121 yhpfptpypa pfqtanavst vttecterps psgqvfplst qrsrssnrgp vmqkqqlqmh
      181 ikskrppvkn vatqketsss gpenrskivl lvdasqqtdf psdianksls esastmlwks
      241 kgrrrrtshp aaessseqga seadidsdsg ycspkhgnnq aaamasrntd scamnvveps
      301 inttgigwtn vnsqatqkkp wiektptfsr ggrqaeqrnn pqsgfrcrdh stssermqgl
      361 qkrhekplat sqtsraeqsp eplyfedede fpelnsdngs sksssiqqki spkvlddlpe
      421 nspinivqtp ipittsvpkr aksqkkkala aalataqeys eismeqkklq ealskaagkk
      481 sktpvqldlg dmlaalekqq qamkarqitn trplsytvgs aapfhtkesa srksltkgqp
      541 smgclnplds tapkvkrgke reiaklkrpt alkkiilker eekkgrlsad hsllgsdeqk
      601 eahlnlsadq sqelasqeet glsmpsdtsl spasqnspyc mtpvsqgspa ssgigspmas
      661 saitkihskr freycnqvls keidecvtll lqelvsfqer iyqkdptrak arrrlvmglr
      721 evtkhmklnk ikcviispnc ekiqskggld ealynviama reqeipfvfa lgrkalgrcv
      781 nklvpvsvvg ifnysgaedl fnklvsltee arkayrdmva ameqeqaeea lknvkkaphh
      841 mghsrnpsaa saisfcsvis episevneke yetnwrnmve tsdgletsen eresvckaav
      901 pekvgngqme kttlnkqppl attgttsatn hgkstpgdkd evkpddnlew asqqstetgs
      961 ldgscrdlln ssmtsttstl vpgmleeeee eeddddedyt hepisvevql nsrieswvse
     1021 tqrtmetlql gktlsgaeed naeqseeeem etseqadpit dgeewtndkh asntqhkpti
     1081 csslnkehtd siymp
//
LOCUS       XP_041324790             537 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptide peptidase-like 2A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324790
VERSION     XP_041324790.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468856.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="signal peptide peptidase-like 2A isoform X1"
                     /calculated_mol_wt=59228
     Region          40..159
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            120..122
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          211..513
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..537
                     /gene="SPPL2A"
                     /coded_by="XM_041468856.1:469..2082"
                     /db_xref="GeneID:121354329"
ORIGIN      
        1 mgaagllwaa lwalllplva adegilhasg sgvppvtkdy ciiynsnwls lpktldnatf
       61 rplenltstv lcssaeipsg lmkdkavvvm rgnctfleka riaqslgakm lliasksrls
      121 aisdnktdfe dvtlpialir yndivdmqlv lgnevnvtly spplpefdys mvvifliavf
      181 tvalggywsg vaelenlkav aspgeretrw kkeenvtftp vtvilfvvic cvmlvllyff
      241 ykwlvyviis vfclasamsl ynclaaligq ipfgqcritc snktievrli flaifciaaa
      301 vvwavfrned rwawilqdil gvafclnfik tlkmpnfksc villglllly dvffvfitpf
      361 itkngasimv evaagpfgns eksdgnlvev ptersaphek lpvvirvprl ehsastlcdl
      421 pfsllgfgdi ivpgllvayc rrfdvqtrss siyyisctia yavgmvltfi vlalmkmgqp
      481 allylvpctl itsslvawrr kemkkfwkgs syqmmehldy tgneestasa teqpggq
//
LOCUS       XP_041324791             534 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptide peptidase-like 2A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324791
VERSION     XP_041324791.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468857.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="signal peptide peptidase-like 2A isoform X2"
                     /calculated_mol_wt=58924
     Region          40..159
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            120..122
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          211..513
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..534
                     /gene="SPPL2A"
                     /coded_by="XM_041468857.1:476..2080"
                     /db_xref="GeneID:121354329"
ORIGIN      
        1 mgaagllwaa lwalllplva adegilhasg sgvppvtkdy ciiynsnwls lpktldnatf
       61 rplenltstv lcssaeipsg lmkdkavvvm rgnctfleka riaqslgakm lliasksrls
      121 aisdnktdfe dvtlpialir yndivdmqlv lgnevnvtly spplpefdys mvvifliavf
      181 tvalggywsg vaelenlkav aspgeretrw kkeenvtftp vtvilfvvic cvmlvllyff
      241 ykwlvyviis vfclasamsl ynclaaligq ipfgqcritc snktievrli flaifciaaa
      301 vvwavfrned rwawilqdil gvafclnfik tlkmpnfksc villglllly dvffvfitpf
      361 itkngasimv evaagpfgns eksdgnlvev ptersaphek lpvvirvprl ehsastlcdl
      421 pfsllgfgdi ivpgllvayc rrfdvqtrss siyyisctia yavgmvltfi vlalmkmgqp
      481 allylvpctl itsslvawrr kemkkfwkgs syqvsdssrt pllqddgtpg lhrk
//
LOCUS       XP_041324792             519 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptide peptidase-like 2A isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324792
VERSION     XP_041324792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..519
                     /product="signal peptide peptidase-like 2A isoform X3"
                     /calculated_mol_wt=57281
     Region          40..159
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            120..122
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          211..495
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..519
                     /gene="SPPL2A"
                     /coded_by="XM_041468858.1:460..2019"
                     /db_xref="GeneID:121354329"
ORIGIN      
        1 mgaagllwaa lwalllplva adegilhasg sgvppvtkdy ciiynsnwls lpktldnatf
       61 rplenltstv lcssaeipsg lmkdkavvvm rgnctfleka riaqslgakm lliasksrls
      121 aisdnktdfe dvtlpialir yndivdmqlv lgnevnvtly spplpefdys mvvifliavf
      181 tvalggywsg vaelenlkav aspgeretrw kkeenvtftp vtvilfvvic cvmlvllyff
      241 ykwlvyviis vfclasamsl ynclaaligq ipfgqcritc snktievrli flaifciaaa
      301 vvwavfrned rwawilqdil gvafclnfik tlkmpnfksc villglllly dvffvfitpf
      361 itkngasimv evaagpfgns eklpvvirvp rlehsastlc dlpfsllgfg diivpgllva
      421 ycrrfdvqtr sssiyyisct iayavgmvlt fivlalmkmg qpallylvpc tlitsslvaw
      481 rrkemkkfwk gssyqmmehl dytgneesta sateqpggq
//
LOCUS       XP_041324793             516 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptide peptidase-like 2A isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324793
VERSION     XP_041324793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..516
                     /product="signal peptide peptidase-like 2A isoform X4"
                     /calculated_mol_wt=56977
     Region          40..159
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            120..122
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          211..495
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..516
                     /gene="SPPL2A"
                     /coded_by="XM_041468859.1:471..2021"
                     /db_xref="GeneID:121354329"
ORIGIN      
        1 mgaagllwaa lwalllplva adegilhasg sgvppvtkdy ciiynsnwls lpktldnatf
       61 rplenltstv lcssaeipsg lmkdkavvvm rgnctfleka riaqslgakm lliasksrls
      121 aisdnktdfe dvtlpialir yndivdmqlv lgnevnvtly spplpefdys mvvifliavf
      181 tvalggywsg vaelenlkav aspgeretrw kkeenvtftp vtvilfvvic cvmlvllyff
      241 ykwlvyviis vfclasamsl ynclaaligq ipfgqcritc snktievrli flaifciaaa
      301 vvwavfrned rwawilqdil gvafclnfik tlkmpnfksc villglllly dvffvfitpf
      361 itkngasimv evaagpfgns eklpvvirvp rlehsastlc dlpfsllgfg diivpgllva
      421 ycrrfdvqtr sssiyyisct iayavgmvlt fivlalmkmg qpallylvpc tlitsslvaw
      481 rrkemkkfwk gssyqvsdss rtpllqddgt pglhrk
//
LOCUS       XP_041324794             627 aa            linear   VRT 06-MAY-2021
DEFINITION  protein fem-1 homolog B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324794
VERSION     XP_041324794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468860.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="protein fem-1 homolog B isoform X1"
                     /calculated_mol_wt=70228
     Region          4..256
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          48..76
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(87,89,93..94,97..99,101..102,106,109,118,120,122,
                     126..127,130..132,134..135,139,142,151,153,155,159..160,
                     163..165,167..168,172,175)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          87..118
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          120..151
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          153..183
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          186..211
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          218..247
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <477..>577
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          483..529
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          531..570
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..627
                     /gene="FEM1B"
                     /coded_by="XM_041468860.1:74..1957"
                     /db_xref="GeneID:121354330"
ORIGIN      
        1 meglagyvyk aasegrvltl aalllnrses dikyllgyvs qhggqrstpl iiaarnghak
       61 vvrlllehyr vhtqqtgtvr fdgfvidgat alwcaagagh fevvkllvsh ganvnhttvt
      121 nstplraacf dgrldivkyl vennanisia nkydntclmi aaykghtdvv rylleqhadp
      181 nakahcgata lhfaaeaghl eivrelvkwk aammvnghgm tplkvaaesc kadvvellla
      241 hadcdrrsri ealellgasf andrenydil ktyhylylam leryrdsenv iekevlprie
      301 aygnrsecrt pqelesirqd rdalhmegli vrerilgsdn idvshpiiyr gavyadnmef
      361 eqciklwlha lhlrqkgnrn thkdllrfaq vfsqmihlne pvkakdiesv lrcsvleieq
      421 gmarikttpd adihtamdny ecniftflyl vcistktqcs eddqsrinkq iynlihldpr
      481 trdgssllhh avnsgtpvdd fhtndvcsfp nalvtkllld cgadvnavdn egnsplhiiv
      541 qyhrpisdfl tlhsiiislv eagahtdmtn kqkktpldks ttgvseillk tqmklslkcl
      601 aaravriyni syqnqiprtl eefvqfh
//
LOCUS       XP_041324795             550 aa            linear   VRT 06-MAY-2021
DEFINITION  protein fem-1 homolog B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324795
VERSION     XP_041324795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..550
                     /product="protein fem-1 homolog B isoform X2"
                     /calculated_mol_wt=61667
     Region          <10..194
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(10,12,16..17,20..22,24..25,29,32,41,43,45,49..50,
                     53..55,57..58,62,65,74,76,78,82..83,86..88,90..91,95,98)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          10..41
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          43..74
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          76..106
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <92..>466
                     /region_name="PHA02876"
                     /note="ankyrin repeat protein; Provisional"
                     /db_xref="CDD:165207"
     Region          109..134
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          141..170
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <400..>500
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          406..452
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          454..493
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..550
                     /gene="FEM1B"
                     /coded_by="XM_041468861.1:39..1691"
                     /db_xref="GeneID:121354330"
ORIGIN      
        1 meglagfvid gatalwcaag aghfevvkll vshganvnht tvtnstplra acfdgrldiv
       61 kylvennani siankydntc lmiaaykght dvvrylleqh adpnakahcg atalhfaaea
      121 ghleivrelv kwkaammvng hgmtplkvaa esckadvvel llahadcdrr sriealellg
      181 asfandreny dilktyhyly lamleryrds enviekevlp rieaygnrse crtpqelesi
      241 rqdrdalhme glivrerilg sdnidvshpi iyrgavyadn mefeqciklw lhalhlrqkg
      301 nrnthkdllr faqvfsqmih lnepvkakdi esvlrcsvle ieqgmarikt tpdadihtam
      361 dnyecniftf lylvcistkt qcseddqsri nkqiynlihl dprtrdgssl lhhavnsgtp
      421 vddfhtndvc sfpnalvtkl lldcgadvna vdnegnsplh iivqyhrpis dfltlhsiii
      481 slveagahtd mtnkqkktpl dksttgvsei llktqmklsl kclaaravri ynisyqnqip
      541 rtleefvqfh
//
LOCUS       XP_041324796            1191 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin alpha-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041324796
VERSION     XP_041324796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1191
                     /product="integrin alpha-11"
                     /calculated_mol_wt=132715
     Region          39..89
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          166..344
                     /region_name="vWA_integrins_alpha_subunit"
                     /note="Integrins are a class of adhesion receptors that
                     link the extracellular matrix to the cytoskeleton and
                     cooperate with growth factor receptors to promote celll
                     survival, cell cycle progression and cell migration.
                     Integrins consist of an alpha and a beta...; cd01469"
                     /db_xref="CDD:238746"
     Site            order(166,168,187,268,270,298,333)
                     /site_type="active"
                     /note="integrin inhibitor binding pocket [active]"
                     /db_xref="CDD:238746"
     Site            order(173,175,177,243,274)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238746"
     Site            order(175..177,179,243)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238746"
     Region          479..>521
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          541..595
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          639..1038
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     CDS             1..1191
                     /gene="ITGA11"
                     /coded_by="XM_041468862.1:80..3655"
                     /db_xref="GeneID:121354332"
ORIGIN      
        1 mdipsgilla cslcllpgfg nsfnidtkrp qiivgsresf fgytvqqhdi ggkkwlvvga
       61 pyesngqqkt gdvykcpvls eshgnctkln lgrvtlsnvs erkdnmrlgl slatnprdss
      121 flacsplwsh ecgssyyttg mcsrvnsnfr fsrtvapalq rcqtymdiii vldgsnsiyp
      181 wvevqhflin ilkkfyigpg qiqvgvvqyg edvvhefhln dyrsvqdvva aashieqrgg
      241 tetrtaygie farseafrkg grkgakrvmi vitdgeshds pdlekvieds erdnvtryav
      301 avlgyynrrg inpeaflnei kfiasdpddk hffnvtdeaa lkdivdalge rifslegtnk
      361 neisfglems qtgfsshvve dgillgavga ydwngavlke tssgkviplr esylqefpee
      421 lknhgaylgy tvssvvstrh eriyvagapr fnhtgkvilf nmhsnrnlti hqalkgeqig
      481 syygseinsl dvngdgvtdv llvgapmffs egrergkvyv yalqgnlfvp sgalvdlqsy
      541 qnsrfgscia avpdlnqdsy ndlvvgaple dehqgaiyif lgfqetilkk ykqriaaadl
      601 apglmyfgcs ihgqldlned glvdlavgsl gnavvlwsrs vvqinaslrf eppkiniftk
      661 dcrrngkeat cmrafvcfta lflsthfqta svglryntti derrysprah lddggeraap
      721 rglvlpagqe lchtlpfhvl dtadyvkpvt fsidyelehp ehgpmlddgw ptslrvsvpf
      781 wngcnedehc vpdlvldars dipsamefcr ralrrgdcsa fslsfdasvf viestrrrva
      841 veatlenrge naystvlnis fsrnlqlasl itkddtdini dcasddrhpt rrvcnvsypf
      901 frakakvafr ldfefsksvf lqsmevymva srenlegkks tenikfgnfg gksykplchp
      961 lshrtssldy feirsnnsld gsnpigppfh ctftlqnlgf fpvqgvtlki tvpvatragn
     1021 rlllptefra dqenttcsiw gnttdyrrtp aeedlsrtph lnhsnsdvvs idcevklapn
     1081 eelnlhlrgn lwmkslkalk fkalklttia alqrrfrspf vfreedpsrq itfeiskpee
     1141 sqipiwiilg stfgglllla llvlalwklg ffksgsrrra aereqnshgm e
//
LOCUS       XP_041324797             284 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomyosin alpha-1 chain isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324797
VERSION     XP_041324797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X1"
                     /calculated_mol_wt=32679
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_041468863.1:220..1074"
                     /db_xref="GeneID:121354333"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaeerskqle delvalqkkl katedeldky
       61 seslkdaqek leladkkatd aesevaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi enraqkdeek meiqeiqlke akhiaeeadr kyeevarklv iiesdlerae
      181 eraelseskc aeleeelktv tnnlksleaq aekysqkedk yeeeikvltd klkeaetrae
      241 faersvtkle ksiddledel yaqklkykai seeldhalnd mtsi
//
LOCUS       XP_041324798             284 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomyosin alpha-1 chain isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324798
VERSION     XP_041324798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X2"
                     /calculated_mol_wt=32734
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_041468864.1:220..1074"
                     /db_xref="GeneID:121354333"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaeerskqle delvalqkkl katedeldky
       61 seslkdaqek leladkkatd aesevaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi enraqkdeek meiqeiqlke akhiaeeadr kyeevarklv iiesdlerae
      181 eraelseskc aeleeelktv tnnlksleaq aekysqkedk yeeeikvltd klkeaetrae
      241 faersvtkle ksiddleekv ahakeenlnm hqmldqtlle lnnm
//
LOCUS       XP_041324800             284 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomyosin alpha-1 chain isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324800
VERSION     XP_041324800.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468866.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="tropomyosin alpha-1 chain isoform X3"
                     /calculated_mol_wt=32737
     Region          48..282
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..284
                     /gene="TPM1"
                     /coded_by="XM_041468866.1:168..1022"
                     /db_xref="GeneID:121354333"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaeerskqle ddivqlekql rgtedtrdqv
       61 leelhkseds llsaeenaak aesevaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi enraqkdeek meiqeiqlke akhiaeeadr kyeevarklv iiesdlerae
      181 eraelseskc aeleeelktv tnnlksleaq aekysqkedk yeeeikvltd klkeaetrae
      241 faersvtkle ksiddleekv ahakeenlnm hqmldqtlle lnnm
//
LOCUS       XP_041324801             248 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomyosin alpha-1 chain isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324801
VERSION     XP_041324801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..248
                     /product="tropomyosin alpha-1 chain isoform X4"
                     /calculated_mol_wt=28652
     Region          12..246
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..248
                     /gene="TPM1"
                     /coded_by="XM_041468867.1:28..774"
                     /db_xref="GeneID:121354333"
ORIGIN      
        1 maamssleav rrkirslqeq adaaeeragr lqrevdqera lreeaeseva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkvienraqk deekmeiqei qlkeakhiae
      121 eadrkyeeva rklviiesdl eraeeraels eskcaeleee lktvtnnlks leaqaekysq
      181 kedkyeeeik vltdklkeae traefaersv tkleksiddl eekvahakee nlnmhqmldq
      241 tllelnnm
//
LOCUS       XP_041324802             326 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomyosin alpha-1 chain isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324802
VERSION     XP_041324802.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468868.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="tropomyosin alpha-1 chain isoform X5"
                     /calculated_mol_wt=37512
     Region          <1..>158
                     /region_name="COG4913"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal ATPase domain [Function unknown]"
                     /db_xref="CDD:443941"
     Region          90..324
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..326
                     /gene="TPM1"
                     /coded_by="XM_041468868.1:166..1146"
                     /db_xref="GeneID:121354333"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaeerskqle ddivqlekql rgtedtrdqv
       61 leelhkseds llsaeenaak ledelvalqk klkatedeld kyseslkdaq ekleladkka
      121 tdaesevasl nrriqlveee ldraqerlat alqkleeaek aadesergmk vienraqkde
      181 ekmeiqeiql keakhiaeea drkyeevark lviiesdler aeeraelses kcaeleeelk
      241 tvtnnlksle aqaekysqke dkyeeeikvl tdklkeaetr aefaersvtk leksiddlee
      301 kvahakeenl nmhqmldqtl lelnnm
//
LOCUS       XP_041324803             337 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomyosin alpha-1 chain isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324803
VERSION     XP_041324803.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468869.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="tropomyosin alpha-1 chain isoform X6"
                     /calculated_mol_wt=38563
     Region          48..258
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..337
                     /gene="TPM1"
                     /coded_by="XM_041468869.1:220..1233"
                     /db_xref="GeneID:121354333"
ORIGIN      
        1 mdaikkkmqm lkldkenald raeqaeadkk aaeerskqle delvalqkkl katedeldky
       61 seslkdaqek leladkkatd aesevaslnr riqlveeeld raqerlatal qkleeaekaa
      121 desergmkvi enraqkdeek meiqeiqlke akhiaeeadr kyeevarklv iiesdlerae
      181 eraelseskc aeleeelktv tnnlksleaq aekysqkedk yeeeikvltd klkeaetrae
      241 faersvtkle ksiddlednf lcfsspktss sgwikhlskl wmfhglivls sslvdsssit
      301 clrtcsvcal lyrnyisqck inipavflll flcllfk
//
LOCUS       XP_041324804             301 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomyosin alpha-1 chain isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324804
VERSION     XP_041324804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="tropomyosin alpha-1 chain isoform X7"
                     /calculated_mol_wt=34481
     Region          12..222
                     /region_name="Tropomyosin"
                     /note="pfam00261"
                     /db_xref="CDD:459736"
     CDS             1..301
                     /gene="TPM1"
                     /coded_by="XM_041468870.1:28..933"
                     /db_xref="GeneID:121354333"
ORIGIN      
        1 maamssleav rrkirslqeq adaaeeragr lqrevdqera lreeaeseva slnrriqlve
       61 eeldraqerl atalqkleea ekaadeserg mkvienraqk deekmeiqei qlkeakhiae
      121 eadrkyeeva rklviiesdl eraeeraels eskcaeleee lktvtnnlks leaqaekysq
      181 kedkyeeeik vltdklkeae traefaersv tkleksiddl ednflcfssp ktsssgwikh
      241 lsklwmfhgl ivlssslvds ssitclrtcs vcallyrnyi sqckinipav flllflcllf
      301 k
//
LOCUS       XP_041324805             315 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha- and gamma-adaptin-binding protein p34 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324805
VERSION     XP_041324805.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468871.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="alpha- and gamma-adaptin-binding protein p34
                     isoform X1"
                     /calculated_mol_wt=34452
     Region          <77..146
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          156..294
                     /region_name="Adaptin_binding"
                     /note="Alpha and gamma adaptin binding protein p34;
                     pfam10199"
                     /db_xref="CDD:462994"
     CDS             1..315
                     /gene="AAGAB"
                     /coded_by="XM_041468871.1:20..967"
                     /db_xref="GeneID:121354336"
ORIGIN      
        1 maaaarplal ltscaagfap eelvkritgk ddltvgaits grvnfypwti dnkyysadih
       61 lcvvpntfhv tgeiaeavqa fvvyfdsttk tglesvsewl plteewlpev milvcdrvse
      121 ngvnrqkaqe wcikhgfelv elspeelpde dddfpestgv krivqalnan vwsnvvmkgd
      181 rtqgfgllst lagahrsrgc eetpetesdp spgdregsqs dagedgagtn slepdsaadp
      241 mldmdiqela slttrdgdle nferlfsklk emkdkaatlp heqrklhaek vakafwmaig
      301 gdrdeiegls sdeen
//
LOCUS       XP_041324806             287 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha- and gamma-adaptin-binding protein p34 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324806
VERSION     XP_041324806.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468872.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="alpha- and gamma-adaptin-binding protein p34
                     isoform X2"
                     /calculated_mol_wt=31303
     Region          <77..146
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          156..286
                     /region_name="Adaptin_binding"
                     /note="Alpha and gamma adaptin binding protein p34;
                     pfam10199"
                     /db_xref="CDD:462994"
     CDS             1..287
                     /gene="AAGAB"
                     /coded_by="XM_041468872.1:20..883"
                     /db_xref="GeneID:121354336"
ORIGIN      
        1 maaaarplal ltscaagfap eelvkritgk ddltvgaits grvnfypwti dnkyysadih
       61 lcvvpntfhv tgeiaeavqa fvvyfdsttk tglesvsewl plteewlpev milvcdrvse
      121 ngvnrqkaqe wcikhgfelv elspeelpde dddfpestgv krivqalnan vwsnvvmkgd
      181 rtqgfgllst lagahrsrgc eetpetesdp spgdregsqs dagedgagtn slepdsaadp
      241 mldmdiqela slttrdgdle nferlfsklk emkggqslld gdwrrqg
//
LOCUS       XP_041324807             155 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C15orf61 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324807
VERSION     XP_041324807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="uncharacterized protein C15orf61 homolog"
                     /calculated_mol_wt=17293
     Region          32..152
                     /region_name="DUF4528"
                     /note="Domain of unknown function (DUF4528); pfam15031"
                     /db_xref="CDD:434406"
     CDS             1..155
                     /gene="CUNH15orf61"
                     /coded_by="XM_041468873.1:36..503"
                     /db_xref="GeneID:121354338"
ORIGIN      
        1 mrallrrlhg aavalllwrg papsparpaa sevlsqhlrq rrlphwtsfc vkysavhndq
       61 fglshfnwpv dganylvlrt gcfpfikyhc sraapqdlal qdafftalkv lnagiptlly
      121 gigswffarv tetvhtshgp vtiyflnked egamy
//
LOCUS       XP_041324808             155 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C15orf61 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324808
VERSION     XP_041324808.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468874.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="uncharacterized protein C15orf61 homolog"
                     /calculated_mol_wt=17293
     Region          32..152
                     /region_name="DUF4528"
                     /note="Domain of unknown function (DUF4528); pfam15031"
                     /db_xref="CDD:434406"
     CDS             1..155
                     /gene="CUNH15orf61"
                     /coded_by="XM_041468874.1:36..503"
                     /db_xref="GeneID:121354338"
ORIGIN      
        1 mrallrrlhg aavalllwrg papsparpaa sevlsqhlrq rrlphwtsfc vkysavhndq
       61 fglshfnwpv dganylvlrt gcfpfikyhc sraapqdlal qdafftalkv lnagiptlly
      121 gigswffarv tetvhtshgp vtiyflnked egamy
//
LOCUS       XP_041324809             882 aa            linear   VRT 06-MAY-2021
DEFINITION  dipeptidyl peptidase 8 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324809
VERSION     XP_041324809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..882
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..882
                     /product="dipeptidyl peptidase 8 isoform X1"
                     /calculated_mol_wt=101181
     Region          1..146
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          159..579
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          671..875
                     /region_name="Peptidase_S9"
                     /note="Prolyl oligopeptidase family; pfam00326"
                     /db_xref="CDD:459761"
     CDS             1..882
                     /gene="DPP8"
                     /coded_by="XM_041468875.1:55..2703"
                     /db_xref="GeneID:121354339"
ORIGIN      
        1 maaameteqp gleifetagr eeqvpreeqp klepfyverh swsqlrkllt dtrkyhgymm
       61 akaphdftfv kkndpegphs driyylamsg enrentlfys eipktinkaa vlllswkpll
      121 dlfpaildyg mysreeellr erkrigtvgi asydyhresg tflfqagsgi yhvkdggphg
      181 ftqqplrpil vetscpnirm dpklcpadpn wiafihcndi wisniesree rrltfvhnel
      241 asveedpksa gvatfvlqee fdrytgywwc pkaqptldgg kvlqilyeen deseveiihv
      301 tspmletrrt dsfrypktgt anpkvtfkis evtinaegri advvdkelvq pfeilfegve
      361 yiaragwtpe gkyiwsilld rsqtrlqivl ippalfipte ddamerqkli davpdsvtpf
      421 iiyeettdiw inihdifhvf pqshedeief ifasecktgf rhlykvtsvl keskykrscg
      481 slpapsdfkc likeeiaits gewevlgrhg sniyvdeakk lvyfqgtkds plehhlyvvn
      541 yenpgevkrl tergyshacc vsqdcdmfis kysnqknphc vslyrltgse ddaahrtkef
      601 watildsagp lpdyippevf sfesstgftl ygmmykphnl qpgkkyptvl fiyggpqvql
      661 vnnrfkgiky frlntlaslg yvvvvidnrg schrglkfeg afkykmgqie iddqveglqy
      721 lasqydfidl ervgihgwsy ggylslmalt qrsdifrvai agapvtlwif ydtgyterym
      781 ghpehneqgy ylgsvamqae kfpsepnrll llhgfldenv hfahtsills flvragkpyd
      841 lqiypqerhs irvpesgehy elhllyylqe nlgsriaamk am
//
LOCUS       XP_041324811             762 aa            linear   VRT 06-MAY-2021
DEFINITION  dipeptidyl peptidase 8 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324811
VERSION     XP_041324811.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468877.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..762
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..762
                     /product="dipeptidyl peptidase 8 isoform X2"
                     /calculated_mol_wt=87229
     Region          1..146
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          159..579
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          671..>752
                     /region_name="Peptidase_S9"
                     /note="Prolyl oligopeptidase family; pfam00326"
                     /db_xref="CDD:459761"
     CDS             1..762
                     /gene="DPP8"
                     /coded_by="XM_041468877.1:55..2343"
                     /db_xref="GeneID:121354339"
ORIGIN      
        1 maaameteqp gleifetagr eeqvpreeqp klepfyverh swsqlrkllt dtrkyhgymm
       61 akaphdftfv kkndpegphs driyylamsg enrentlfys eipktinkaa vlllswkpll
      121 dlfpaildyg mysreeellr erkrigtvgi asydyhresg tflfqagsgi yhvkdggphg
      181 ftqqplrpil vetscpnirm dpklcpadpn wiafihcndi wisniesree rrltfvhnel
      241 asveedpksa gvatfvlqee fdrytgywwc pkaqptldgg kvlqilyeen deseveiihv
      301 tspmletrrt dsfrypktgt anpkvtfkis evtinaegri advvdkelvq pfeilfegve
      361 yiaragwtpe gkyiwsilld rsqtrlqivl ippalfipte ddamerqkli davpdsvtpf
      421 iiyeettdiw inihdifhvf pqshedeief ifasecktgf rhlykvtsvl keskykrscg
      481 slpapsdfkc likeeiaits gewevlgrhg sniyvdeakk lvyfqgtkds plehhlyvvn
      541 yenpgevkrl tergyshacc vsqdcdmfis kysnqknphc vslyrltgse ddaahrtkef
      601 watildsagp lpdyippevf sfesstgftl ygmmykphnl qpgkkyptvl fiyggpqvql
      661 vnnrfkgiky frlntlaslg yvvvvidnrg schrglkfeg afkykmgqie iddqveglqy
      721 lasqydfidl ervgihgwsy ggylslmalt qrlflvssth gs
//
LOCUS       XP_041324812             754 aa            linear   VRT 06-MAY-2021
DEFINITION  dipeptidyl peptidase 8 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324812
VERSION     XP_041324812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..754
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..754
                     /product="dipeptidyl peptidase 8 isoform X3"
                     /calculated_mol_wt=86484
     Region          1..146
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          159..579
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     Region          671..>752
                     /region_name="Peptidase_S9"
                     /note="Prolyl oligopeptidase family; pfam00326"
                     /db_xref="CDD:459761"
     CDS             1..754
                     /gene="DPP8"
                     /coded_by="XM_041468878.1:55..2319"
                     /db_xref="GeneID:121354339"
ORIGIN      
        1 maaameteqp gleifetagr eeqvpreeqp klepfyverh swsqlrkllt dtrkyhgymm
       61 akaphdftfv kkndpegphs driyylamsg enrentlfys eipktinkaa vlllswkpll
      121 dlfpaildyg mysreeellr erkrigtvgi asydyhresg tflfqagsgi yhvkdggphg
      181 ftqqplrpil vetscpnirm dpklcpadpn wiafihcndi wisniesree rrltfvhnel
      241 asveedpksa gvatfvlqee fdrytgywwc pkaqptldgg kvlqilyeen deseveiihv
      301 tspmletrrt dsfrypktgt anpkvtfkis evtinaegri advvdkelvq pfeilfegve
      361 yiaragwtpe gkyiwsilld rsqtrlqivl ippalfipte ddamerqkli davpdsvtpf
      421 iiyeettdiw inihdifhvf pqshedeief ifasecktgf rhlykvtsvl keskykrscg
      481 slpapsdfkc likeeiaits gewevlgrhg sniyvdeakk lvyfqgtkds plehhlyvvn
      541 yenpgevkrl tergyshacc vsqdcdmfis kysnqknphc vslyrltgse ddaahrtkef
      601 watildsagp lpdyippevf sfesstgftl ygmmykphnl qpgkkyptvl fiyggpqvql
      661 vnnrfkgiky frlntlaslg yvvvvidnrg schrglkfeg afkykmgqie iddqveglqy
      721 lasqydfidl ervgihgwsy ggylslmalt qrwp
//
LOCUS       XP_041324813             372 aa            linear   VRT 06-MAY-2021
DEFINITION  dipeptidyl peptidase 8 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324813
VERSION     XP_041324813.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468879.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="dipeptidyl peptidase 8 isoform X4"
                     /calculated_mol_wt=42658
     Region          1..146
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          159..>372
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     CDS             1..372
                     /gene="DPP8"
                     /coded_by="XM_041468879.1:55..1173"
                     /db_xref="GeneID:121354339"
ORIGIN      
        1 maaameteqp gleifetagr eeqvpreeqp klepfyverh swsqlrkllt dtrkyhgymm
       61 akaphdftfv kkndpegphs driyylamsg enrentlfys eipktinkaa vlllswkpll
      121 dlfpaildyg mysreeellr erkrigtvgi asydyhresg tflfqagsgi yhvkdggphg
      181 ftqqplrpil vetscpnirm dpklcpadpn wiafihcndi wisniesree rrltfvhnel
      241 asveedpksa gvatfvlqee fdrytgywwc pkaqptldgg kvlqilyeen deseveiihv
      301 tspmletrrt dsfrypktgt anpkvtfkis evtinaegri advvdkelvq pfeilfegve
      361 yiaragwtpe gk
//
LOCUS       XP_041324814             372 aa            linear   VRT 06-MAY-2021
DEFINITION  dipeptidyl peptidase 8 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324814
VERSION     XP_041324814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="dipeptidyl peptidase 8 isoform X4"
                     /calculated_mol_wt=42658
     Region          1..146
                     /region_name="Dpp_8_9_N"
                     /note="Dipeptidyl peptidase 8 and 9 N-terminal; pfam19520"
                     /db_xref="CDD:466112"
     Region          159..>372
                     /region_name="DPPIV_N"
                     /note="Dipeptidyl peptidase IV (DPP IV) N-terminal region;
                     pfam00930"
                     /db_xref="CDD:395744"
     CDS             1..372
                     /gene="DPP8"
                     /coded_by="XM_041468880.1:55..1173"
                     /db_xref="GeneID:121354339"
ORIGIN      
        1 maaameteqp gleifetagr eeqvpreeqp klepfyverh swsqlrkllt dtrkyhgymm
       61 akaphdftfv kkndpegphs driyylamsg enrentlfys eipktinkaa vlllswkpll
      121 dlfpaildyg mysreeellr erkrigtvgi asydyhresg tflfqagsgi yhvkdggphg
      181 ftqqplrpil vetscpnirm dpklcpadpn wiafihcndi wisniesree rrltfvhnel
      241 asveedpksa gvatfvlqee fdrytgywwc pkaqptldgg kvlqilyeen deseveiihv
      301 tspmletrrt dsfrypktgt anpkvtfkis evtinaegri advvdkelvq pfeilfegve
      361 yiaragwtpe gk
//
LOCUS       XP_041324815             593 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324815
VERSION     XP_041324815.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468881.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..593
                     /product="E3 ubiquitin-protein ligase ARIH1 isoform X1"
                     /calculated_mol_wt=67654
     Region          216..274
                     /region_name="RING-HC_RBR_HHARI"
                     /note="RING finger, HC subclass, found in human homolog of
                     Drosophila ariadne (HHARI) and similar proteins; cd16626"
                     /db_xref="CDD:438288"
     Region          283..364
                     /region_name="BRcat_RBR_HHARI-like"
                     /note="BRcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20343"
                     /db_xref="CDD:439004"
     Region          368..425
                     /region_name="Rcat_RBR_HHARI-like"
                     /note="Rcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20356"
                     /db_xref="CDD:439017"
     Region          433..>561
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..593
                     /gene="ARIH1"
                     /coded_by="XM_041468881.1:18..1799"
                     /db_xref="GeneID:121354340"
ORIGIN      
        1 maagaqarag pgptaaaagp gagrpreppp lpqrlamdsd egynyefded eecsedsgae
       61 edeedeeede pddnldlgev elvepglrvg gerdgllgse tgglgpgggg gggglgggpg
      121 pgggpeqeed yryevltaeq ilqhmvecir evneviqnpa titrillshf nwdkeklmer
      181 yfdgnleklf aechvinpsk ksrtrqmntr ssaqdmscqi cylnypnsyf tglecghkfc
      241 mqcwseyltt kimeegmgqt iscpahgcdi lvddntvmrl itdskvklky qhlitnsfve
      301 cnrllkwcpa pdchhvvkvq ypdakpvrck cgrqfcfncg enwhdpvkck wlkkwikkcd
      361 ddsetsnwia antkecpkch vtiekdggcn hmvcrnqnck aefcwvclgp wephgsawyn
      421 cnryneddak aardaqeelt qrsraalqry lfycnrymnh mqslrfehkl yaqvkqkmee
      481 mqqhnmswie vqflkkavdv lcqcratlmy tyvfafylkk nnqsiifenn qadlenatev
      541 lsgylerdis qdslqdikqk vqdkyryces rrrvllqhvh egyekdlwey ied
//
LOCUS       XP_041324816             589 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase ARIH1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324816
VERSION     XP_041324816.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468882.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="E3 ubiquitin-protein ligase ARIH1 isoform X2"
                     /calculated_mol_wt=67183
     Region          216..274
                     /region_name="RING-HC_RBR_HHARI"
                     /note="RING finger, HC subclass, found in human homolog of
                     Drosophila ariadne (HHARI) and similar proteins; cd16626"
                     /db_xref="CDD:438288"
     Region          283..364
                     /region_name="BRcat_RBR_HHARI-like"
                     /note="BRcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20343"
                     /db_xref="CDD:439004"
     Region          368..425
                     /region_name="Rcat_RBR_HHARI-like"
                     /note="Rcat domain found in human homolog of Drosophila
                     Ariadne (HHARI) and similar proteins; cd20356"
                     /db_xref="CDD:439017"
     Region          426..>557
                     /region_name="Ariadne"
                     /note="Ariadne domain; pfam19422"
                     /db_xref="CDD:466073"
     CDS             1..589
                     /gene="ARIH1"
                     /coded_by="XM_041468882.1:18..1787"
                     /db_xref="GeneID:121354340"
ORIGIN      
        1 maagaqarag pgptaaaagp gagrpreppp lpqrlamdsd egynyefded eecsedsgae
       61 edeedeeede pddnldlgev elvepglrvg gerdgllgse tgglgpgggg gggglgggpg
      121 pgggpeqeed yryevltaeq ilqhmvecir evneviqnpa titrillshf nwdkeklmer
      181 yfdgnleklf aechvinpsk ksrtrqmntr ssaqdmscqi cylnypnsyf tglecghkfc
      241 mqcwseyltt kimeegmgqt iscpahgcdi lvddntvmrl itdskvklky qhlitnsfve
      301 cnrllkwcpa pdchhvvkvq ypdakpvrck cgrqfcfncg enwhdpvkck wlkkwikkcd
      361 ddsetsnwia antkecpkch vtiekdggcn hmvcrnqnck aefcwvclgp wephgsawyn
      421 cnryneddak aardaqersr aalqrylfyc nrymnhmqsl rfehklyaqv kqkmeemqqh
      481 nmswievqfl kkavdvlcqc ratlmytyvf afylkknnqs iifennqadl enatevlsgy
      541 lerdisqdsl qdikqkvqdk yrycesrrrv llqhvhegye kdlweyied
//
LOCUS       XP_041324817             537 aa            linear   VRT 06-MAY-2021
DEFINITION  Bardet-Biedl syndrome 4 protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324817
VERSION     XP_041324817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="Bardet-Biedl syndrome 4 protein isoform X1"
                     /calculated_mol_wt=59759
     Region          68..95
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          71..332
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          101..129
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(102,105..106,109..110,112,136,139..140,143..144,
                     146..147,172..173,176..177,180)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          134..164
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          169..196
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          202..229
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          236..264
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          270..298
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          288..398
                     /region_name="NrfG"
                     /note="Cytochrome c-type biogenesis protein CcmH/NrfG
                     [Energy production and conversion, Posttranslational
                     modification, protein turnover, chaperones]; COG4235"
                     /db_xref="CDD:443378"
     Site            order(305,308..309,312..313,315,339,342..343,346..347,
                     349..350,373,376..377,380..381,384)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          305..332
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          337..367
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          372..397
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..537
                     /gene="BBS4"
                     /coded_by="XM_041468883.1:42..1655"
                     /db_xref="GeneID:121354341"
ORIGIN      
        1 maepedatvs sspaateptk prpkkapelp ilerknwliy llyvrrdyee ckavikeqlq
       61 esqglceyav yvqalifrle gkiqeslelf qtcsilnprs adnlkqvars lfllgkhkaa
      121 ievyneaakl dekdweishn lgvcymylkh fnkardqlnn alelnrhdlt ymmlgkihll
      181 egevdkaiev ykkavefspe ntdlltalgl lylqtgeyqk afehlgnvlt ydpgnykatl
      241 aagsmmqahg dfdvalskyk vvassvpesp plwnnigmcf fgkkkyvaav sclkranyla
      301 pfdwkilynl glvhltmqqy asafhflsaa infqpkmael ymllavaltn ledienakcs
      361 yeqavaldkc nplinlnyav llynqgdkqg alsqyqemer kvtmaresst pdfdpemvem
      421 aqkmgaalqv geslvwtkps keskskqkaa vsgksssqqp lgsnqalgqa mssaagygkt
      481 mqlppgaatp alpkkppslp lepeqeqdse tspeensapt gdeeqrkekh qsqeaak
//
LOCUS       XP_041324818             452 aa            linear   VRT 06-MAY-2021
DEFINITION  Bardet-Biedl syndrome 4 protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324818
VERSION     XP_041324818.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468884.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..452
                     /product="Bardet-Biedl syndrome 4 protein isoform X2"
                     /calculated_mol_wt=49985
     Region          <2..80
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          16..44
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(17,20..21,24..25,27,51,54..55,58..59,61..62,87..88,
                     91..92,95)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          49..79
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          56..316
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          84..111
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          117..144
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          155..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          185..213
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(220,223..224,227..228,230,254,257..258,261..262,
                     264..265,288,291..292,295..296,299)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          220..247
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          252..282
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          287..312
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..452
                     /gene="BBS4"
                     /coded_by="XM_041468884.1:232..1590"
                     /db_xref="GeneID:121354341"
ORIGIN      
        1 mlsmfktcsi lnprsadnlk qvarslfllg khkaaievyn eaakldekdw eishnlgvcy
       61 mylkhfnkar dqlnnaleln rhdltymmlg kihllegevd kaievykkav efspentdll
      121 talgllylqt geyqkafehl gnvltydpgn ykatlaagsm mqahgdfdva lskykvvass
      181 vpespplwnn igmcffgkkk yvaavsclkr anylapfdwk ilynlglvhl tmqqyasafh
      241 flsaainfqp kmaelymlla valtnledie nakcsyeqav aldkcnplin lnyavllynq
      301 gdkqgalsqy qemerkvtma resstpdfdp emvemaqkmg aalqvgeslv wtkpskesks
      361 kqkaavsgks ssqqplgsnq algqamssaa gygktmqlpp gaatpalpkk ppslplepeq
      421 eqdsetspee nsaptgdeeq rkekhqsqea ak
//
LOCUS       XP_041324819             452 aa            linear   VRT 06-MAY-2021
DEFINITION  Bardet-Biedl syndrome 4 protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324819
VERSION     XP_041324819.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468885.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..452
                     /product="Bardet-Biedl syndrome 4 protein isoform X2"
                     /calculated_mol_wt=49985
     Region          <2..80
                     /region_name="TadD"
                     /note="Flp pilus assembly protein TadD, contains TPR
                     repeats [Intracellular trafficking, secretion, and
                     vesicular transport, Extracellular structures]; COG5010"
                     /db_xref="CDD:444034"
     Region          16..44
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(17,20..21,24..25,27,51,54..55,58..59,61..62,87..88,
                     91..92,95)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          49..79
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          56..316
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          84..111
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          117..144
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          155..179
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          185..213
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(220,223..224,227..228,230,254,257..258,261..262,
                     264..265,288,291..292,295..296,299)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          220..247
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          252..282
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          287..312
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..452
                     /gene="BBS4"
                     /coded_by="XM_041468885.1:220..1578"
                     /db_xref="GeneID:121354341"
ORIGIN      
        1 mlsmfktcsi lnprsadnlk qvarslfllg khkaaievyn eaakldekdw eishnlgvcy
       61 mylkhfnkar dqlnnaleln rhdltymmlg kihllegevd kaievykkav efspentdll
      121 talgllylqt geyqkafehl gnvltydpgn ykatlaagsm mqahgdfdva lskykvvass
      181 vpespplwnn igmcffgkkk yvaavsclkr anylapfdwk ilynlglvhl tmqqyasafh
      241 flsaainfqp kmaelymlla valtnledie nakcsyeqav aldkcnplin lnyavllynq
      301 gdkqgalsqy qemerkvtma resstpdfdp emvemaqkmg aalqvgeslv wtkpskesks
      361 kqkaavsgks ssqqplgsnq algqamssaa gygktmqlpp gaatpalpkk ppslplepeq
      421 eqdsetspee nsaptgdeeq rkekhqsqea ak
//
LOCUS       XP_041324821             392 aa            linear   VRT 06-MAY-2021
DEFINITION  Bardet-Biedl syndrome 4 protein isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324821
VERSION     XP_041324821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="Bardet-Biedl syndrome 4 protein isoform X3"
                     /calculated_mol_wt=43191
     Region          6..256
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          25..51
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          56..86
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          95..119
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          125..153
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(160,163..164,167..168,170,194,197..198,201..202,
                     204..205,228,231..232,235..236,239)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          160..187
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          192..222
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          227..252
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..392
                     /gene="BBS4"
                     /coded_by="XM_041468887.1:353..1531"
                     /db_xref="GeneID:121354341"
ORIGIN      
        1 mylkhfnkar dqlnnaleln rhdltymmlg kihllegevd kaievykkav efspentdll
       61 talgllylqt geyqkafehl gnvltydpgn ykatlaagsm mqahgdfdva lskykvvass
      121 vpespplwnn igmcffgkkk yvaavsclkr anylapfdwk ilynlglvhl tmqqyasafh
      181 flsaainfqp kmaelymlla valtnledie nakcsyeqav aldkcnplin lnyavllynq
      241 gdkqgalsqy qemerkvtma resstpdfdp emvemaqkmg aalqvgeslv wtkpskesks
      301 kqkaavsgks ssqqplgsnq algqamssaa gygktmqlpp gaatpalpkk ppslplepeq
      361 eqdsetspee nsaptgdeeq rkekhqsqea ak
//
LOCUS       XP_041324822             490 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-dependent glucokinase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324822
VERSION     XP_041324822.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468888.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="ADP-dependent glucokinase isoform X1"
                     /calculated_mol_wt=53050
     Region          54..486
                     /region_name="ADPGK_ADPPFK"
                     /note="ADP-dependent glucokinase (ADPGK) and
                     phosphofructokinase (ADPPFK). ADPGK and ADPPFK are
                     proteins that rely on ADP rather than ATP to donate a
                     phosphoryl group. They are found in certain
                     hyperthermophilic archaea and in higher eukaryotes. A
                     functional...; cd01938"
                     /db_xref="CDD:238913"
     Site            order(77..79,151..152,196..199,228..231)
                     /site_type="active"
                     /note="intradomain hinge region [active]"
                     /db_xref="CDD:238913"
     Site            order(78,82,124,152..153,201,471,475)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238913"
     Site            order(153,291,319,322,475)
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238913"
     Site            order(319,376..377,462,464,467,473..474,477)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238913"
     CDS             1..490
                     /gene="ADPGK"
                     /coded_by="XM_041468888.1:58..1530"
                     /db_xref="GeneID:121354342"
ORIGIN      
        1 mwqrsvcvgl lalalgylcv lgpelppaal rqlsasllgt lrrarslear tvaawqaaiv
       61 rpargwarva vgvnacvdvv lsgvklleal glepsdgknh avlnsgqdlk eafahfmerg
      121 aaaerffsda eafqdiarta sehpaaqlyv ggnaaligqk latnpdlkil lcgpvgpklh
      181 ellddnvvvp pesmqerdef hlileyqage qwgrvrapaa nrfifshdls ngalnmlevf
      241 vssldefqpd lvvlsglhmm egqskemrqr rlmeavasis diptdipihl elasmtdqdf
      301 msnimhqqvf plvnsiglne qellfltqsa sgphaslasw sgipdvgvvs dilfwilkeh
      361 gktaerasdl trihfhtlay hilvtvdghw gnqaaavaag araagtqaca tdtidtskvf
      421 lkaplefvts hteapskisl npdepvvhwh regisfhftp vlvckdpvrt vglgdaisae
      481 gllysevypq
//
LOCUS       XP_041324823             489 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-dependent glucokinase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324823
VERSION     XP_041324823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="ADP-dependent glucokinase isoform X2"
                     /calculated_mol_wt=52922
     Region          54..485
                     /region_name="ADPGK_ADPPFK"
                     /note="ADP-dependent glucokinase (ADPGK) and
                     phosphofructokinase (ADPPFK). ADPGK and ADPPFK are
                     proteins that rely on ADP rather than ATP to donate a
                     phosphoryl group. They are found in certain
                     hyperthermophilic archaea and in higher eukaryotes. A
                     functional...; cd01938"
                     /db_xref="CDD:238913"
     Site            order(77..79,151..152,196..199,228..231)
                     /site_type="active"
                     /note="intradomain hinge region [active]"
                     /db_xref="CDD:238913"
     Site            order(78,82,124,152..153,201,470,474)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238913"
     Site            order(153,291,318,321,474)
                     /site_type="other"
                     /note="Mg2+ binding site [ion binding]"
                     /db_xref="CDD:238913"
     Site            order(318,375..376,461,463,466,472..473,476)
                     /site_type="other"
                     /note="ADP binding site [chemical binding]"
                     /db_xref="CDD:238913"
     CDS             1..489
                     /gene="ADPGK"
                     /coded_by="XM_041468889.1:58..1527"
                     /db_xref="GeneID:121354342"
ORIGIN      
        1 mwqrsvcvgl lalalgylcv lgpelppaal rqlsasllgt lrrarslear tvaawqaaiv
       61 rpargwarva vgvnacvdvv lsgvklleal glepsdgknh avlnsgqdlk eafahfmerg
      121 aaaerffsda eafqdiarta sehpaaqlyv ggnaaligqk latnpdlkil lcgpvgpklh
      181 ellddnvvvp pesmqerdef hlileyqage qwgrvrapaa nrfifshdls ngalnmlevf
      241 vssldefqpd lvvlsglhmm egqskemrqr rlmeavasis diptdipihl elasmtdqdf
      301 msnimhqvfp lvnsiglneq ellfltqsas gphaslasws gipdvgvvsd ilfwilkehg
      361 ktaerasdlt rihfhtlayh ilvtvdghwg nqaaavaaga raagtqacat dtidtskvfl
      421 kaplefvtsh teapskisln pdepvvhwhr egisfhftpv lvckdpvrtv glgdaisaeg
      481 llysevypq
//
LOCUS       XP_041324824             708 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier organic anion transporter family member 3A1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324824
VERSION     XP_041324824.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468890.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="solute carrier organic anion transporter family
                     member 3A1"
                     /calculated_mol_wt=76298
     Region          37..561
                     /region_name="MFS_SLCO3_OATP3"
                     /note="Solute carrier organic anion transporter 3 family
                     of the Major Facilitator Superfamily of transporters;
                     cd17402"
                     /db_xref="CDD:340960"
     Site            order(51..52,55..56,59,91,189..190,192..194,197,217,
                     220..221,224,356,359..360,363..365,368,397,401,442..443,
                     447,451,504,507..508,511..512,515)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340960"
     CDS             1..708
                     /gene="SLCO3A1"
                     /coded_by="XM_041468890.1:179..2305"
                     /db_xref="GeneID:121354343"
ORIGIN      
        1 mpgkrgsagg gggselpgag aprqrrrrrk vscfssiqlf lvsecalmla qgtvgaylvs
       61 vlttlerrfn lqsadvgvia ssfeignlal ilfvsyfgar ghrprligcg givmalgall
      121 salpeflthq yeyesgeirw gaegrdvcav ngstsdegpd pdlicrnrta tnmmylllig
      181 aqvllgigat pvqplgvsyi ddhvrrkdss lyigilftml vfgpacgfil gsfctkiyvd
      241 avfidtskld itpddprwig awwggfllcg allffsslpm fgfpqslppr perageseqa
      301 mlpdrdyerp kpsngvlrhp ldgdssttcf qqlrvipkvt khllsnpvft ciilaacmei
      361 avvagfaafl gkyleqqfnl ttssanqllg mtaipcaclg iflggllvkk lslsalgair
      421 mamlvnlvst acyvsflflg cdtgpvagvt vpygnnstpt ssldpyspcn nncecqtdsf
      481 tpvcgadgvt ylsacfagcs stnlsgcscl tsvppenatv vpgkcpspgc eeafltflcv
      541 mcvcsmigam aqtpsviili rtvspelksy algvlflllr llgfipppli fgagidstcl
      601 fwstfcgeqg acalydnvvy rylyvsiaia lksfafilyt ttwqclrkny kryiknhegg
      661 lstseffast ltldnlgrds vpqnqphrtk fiynledhew cenmesvl
//
LOCUS       XP_041324825            3715 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324825
VERSION     XP_041324825.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468891.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3715
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3715
                     /product="vacuolar protein sorting-associated protein 13C"
                     /calculated_mol_wt=416990
     Region          3..>1344
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <1132..>2638
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          2728..2980
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3149..3626
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          3288..3464
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..3715
                     /gene="VPS13C"
                     /coded_by="XM_041468891.1:221..11368"
                     /db_xref="GeneID:121354344"
ORIGIN      
        1 mvlesvvadl lnrflgdyve nlnksqlklg iwggnvaldn lqikenalse ldvpfrikvg
       61 qidkltlkip wknlygeavv atleglylli vpgasvkyda ekeekylqdn kqkelariee
      121 alqkaaekdk pkeekkdtfl eklatqvikn vqvkitgihv kyedditdpq cpislgmtlg
      181 elsllttnen wtpsilneaa kiiykllcld slsaywnihs kmyyhgsreq ildqlkrgip
      241 chghqpedyq yifrpvsasa rlyinpyaev elktpkidcn vevqrivief tkpqylsmid
      301 llesidymvr napyrrfrpn vslhknarew wkyagnsvle vhirrctrmw swsnikqhrq
      361 llksyrnvyk nkltqsklse etqrqiqdle rkldvfniil arqqaqveti rsgqkllkkk
      421 nteaekksgg wfsgfwgkke srikedeesl vpetidelmt peekaklyta igysdsshhl
      481 slpkqyvahv vtlkllstsl tikedknvae tlkvqiidls tkisqrpgaq aikveaklen
      541 wyvtglrqen ivpslvasig dskssllkie fdvnpedsta dqsltiesqp vevkydakti
      601 namveffqts kgmdlerltt atlmkleeik ertatglahi iemrkvldlk inlkpsylvv
      661 prtgfyhens dllildfgtf qlnsinqgss easnfsslee imdkaydkfd vkiknvqllf
      721 grtgedwkka rfqhpstlhi lqpmdihvql aksmverdsr makfkvsggl plvhvrlsdq
      781 kikaisdlld siplpqkssm svpstkvsai ptipvvgkgl lstpqllaei vsdseeeyfd
      841 feesseptds sviqgeeirk eelaqeeltd lhlkfeikev lveltrqkki eetvlvfdvm
      901 hlgteatvkt ynlaavsylk kisldyygig gkkapihlis ssdkpgldll kveyvkadrn
      961 gpqfqtifnn teqmiqvtfs slnlllhtea lmsavsflta vspsgsersg etpskekkqe
     1021 ddsrlkkvsk pskdkdvfdf klfakldafc lnicdekkni aeikiqglds slclqpshtv
     1081 ffarlkdivv tdvdsrtlhk kavsivgdev fsfnltlnph ategeaytdm skvdgtvclk
     1141 vgciqlvylh kflmslltfl nnfqtaketl saatvqaaek aatsvkdlaq rsfrlamdih
     1201 lkapvivipq ssispnaivi dlglikvqnq fvlvssegss lppvidkmdv qltklklsri
     1261 tletdlshpd iqilhpinls lsvkrnlsaa wfhklpvlev tgyldtmnvv lsqedlnvcl
     1321 kvltenlgea eetqkdakse lqkegkmkel ersvliqdks vsegmlsekr kitlnedvin
     1381 mllnfeikev vitlmkqvqk eryplhiltv lqlgtktktr nhelaaaayl kkitmrctei
     1441 qdskgdplci lnsssetdeh llkmeyikad pdgpdfvtty qstkqninvi fscldivlht
     1501 eallsimsfl tfsvpsgglp stdkssehkp qmkeqekgst lrpvsgdaah ddvselklta
     1561 klnafsitvc dqtcriadir iqgmdasvam kpkeikvfsr ledivitnvd pktihkkavs
     1621 imgdevfrfh mslypdatag eayadmsrvd gkmslkvgci qiiylhkffm sllnflnnfq
     1681 aaqealtavt vqaaemaass mkdfakksfr llmdvnlkap vivvpessas rnalvadlgl
     1741 irvqnefklv ssdesplppv idsmdvqlth lklsrciist dsqpdseilr pvsltllvqr
     1801 nlaaawyhkc ptigikgdlk pmqialsesd ltvimkille nlggassqpn tvqeniedmq
     1861 iskkgkaphe tggsegtlvd sgqksvsavq ssvecctllk fdfnfeslsv tlynsdttqe
     1921 sllsvhsdkl rlgelrlhlm assgemfsdg smditvklka ctlddlregi qnvtarmidk
     1981 kddtndismi dirykqdkng tevvavldkl yicasmefll tvahffiksm pvssaegsaq
     2041 fqlkqaasgk skadteisvr pnmtvkavim dpeivfvanl tnadapalkv sfqcdfslts
     2101 dklaqrmtaq vkafrvlaca flkekqgknv ttvlrpcslv menmmhtsgl htvavtieel
     2161 tikispiiln tvvtimaalk pktteedsrg atevsenlwq vkpvdecnaw flgvdiatea
     2221 tetfkdreqi lkqekfdivv ksvqmtlecg lghrtvplll vestfsgvlk nwsslmevta
     2281 dtslevhyyn etyavwepli erveggkkqw nlklemktnp vqersllpgd dfivipepqt
     2341 ainissmdtm nitiskcclt vfsnlakafs eatastfgys fketapiivk nalgvslkvl
     2401 pssnfrivgs vekenvneie agqsmeleys vfeapqrgrl salhrqessv fslnlelqgy
     2461 kealsipvak pgrrlysvtd sadrpdsivv qidaaegnkv itvrsplqik nhfsipfviy
     2521 qlakgskllk pigiskpeee fhvplhsyrc hlyvqptgvf egqfkestty iawreelhrs
     2581 nevkcllqcp atesnflpli isstavpdel nyisssveel dpayiihlgp tltvrnllpy
     2641 slrfllegta edceltegsa advfhsrisg eimdlvllky qgkdwhghlk icdgmseffp
     2701 vcftshcase ltvdvyihsr rvgshmvlsv fspywiinkt srvlqyraed thvkhpadyr
     2761 divlfsfkkk nifsknkiql ciststwsns fsldtvgsyg cvrcpannmd ylvgvsirms
     2821 sfnltrivtf tpfytianks slelevgeig pngslptnkw nyisvseclp fwpenssgel
     2881 cvrvvgyess skpflfkaqd ngtllkleel nggllvdvnv sehstvisft dyhegaapal
     2941 ivnhtpwdsl rykqsglqee melkprqvcl fawtdptkpr kltwgysqcf gehdllkddc
     3001 gqfpynantq ihwvsfldgr qrvllftddv alvskarqae eleqpdqein lsihslglsl
     3061 vnnenkkeis yigitssdvv werkprqkwk pfnqkqinll eqayqkylsk safqgpgwhk
     3121 ldsnievnfs kspmemrlpv rcsirrnfls giqvefkqsp hqrslraqly wlqvdnqlpg
     3181 smfpvvfhpv appksialds epkpfidisi itrfneysqv lqfkyfmvli qemalkidqg
     3241 flgalselft pstdpeaegq rskliqqdvd tlntelmess ltdvsmlsff ehfhispikl
     3301 hlslslasgg easdkgeemi aihslnlllk sigatltdvd dvifklaffe ikyqfykrdq
     3361 lrmrvirhys eqflkqmyvl vlgldvlgnp fglirglseg veaffyepfq gavqgpeefa
     3421 egfvigvrsl lghtvggaag mvsritgtvg kglaaitlde efqqkrreem grqpkdfges
     3481 lakggkgllr gvvggvtgii tkpvegakke gaagffkgig kglvgvvarp tggivdmass
     3541 tfqgiqrvae steevsnlrp prliredgii rpynrveaeg ydlfeklhir klekevyryh
     3601 caiprgrran livtnrrviy vkeveiighl ttewdylfee ftrypsyean ilkitvwqdq
     3661 kmfqrkdstg hecvktvqlw deatarrvcc aiqealatrk qeklvkrasl qlrkp
//
LOCUS       XP_041324826            1860 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324826
VERSION     XP_041324826.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468892.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1860
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 7"
                     /calculated_mol_wt=202525
     Region          120..260
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          320..527
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(466..467,470,476)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          542..606
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          628..671
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          677..775
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          777..886
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          903..957
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          961..1014
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1024..1073
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <1161..1587
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          1589..1637
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1640..1695
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1698..1744
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1747..1802
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     CDS             1..1860
                     /gene="ADAMTS7"
                     /coded_by="XM_041468892.1:1..5583"
                     /db_xref="GeneID:121354345"
ORIGIN      
        1 mltqrpqqvs tpphrqcgat gapppvrprp aepparrshg gpgraapapa pqreewdecr
       61 lsagmsagcp rdcpreerrv saglsagrap gvrgderdec rvsaglfagc lraeprsgsd
      121 ivhpvkvdes gaflsydlsh ralhrrspas rsklpafyel qyrgqalkfn lslnrhllap
      181 gfvserrfgg iagakiqprs ynpchmigev rgrapqpgla alstcdglkg vfqlmdedyf
      241 iepvssspre egaaqphriy krqvpqdrae qgrrppapre pcgvresqdg leqserrrer
      301 weqkqrrrrr irqrsisrek wvetlvvadt kmvefhgsan iekyvltvmn mvaglfhhas
      361 ignpiniaiv rlvlleheee dlkishhadn tlksfckwqk sinvkgdshp lhhdvavllt
      421 rkdicaamnr pcetlglshv agmcqphrsc ninedtglpl aftvahelgh sfgiqhdgss
      481 ndcepvgkrp fimspqllyd tspltwsrcs reyitrfldr gwglclddrp arelldfplv
      541 ppgvlydvgh qcrlqygpys tfcddmdsvc stlwctvgnt chskldaavd gtacgeskwc
      601 fngecvpvgf rpepidggws swsswascsr scgagvqsae rhcsqptpky ggryclgerk
      661 rfricnvrrc ppdkpsfrql qcsqfnpmpy kgklykwtpv pnninpcelh crpeheyfae
      721 klrdavvdgt pcydsdasrd lcingicksv gcdyeidsha vedrcgvchg dgstchtvhk
      781 tfedseglgy vdigiipvga reirieevae agnflalrse dpekyflngg wtiqwngdyr
      841 vagttftykr tgnwenltsp gptvepvwiq llfqetnpgv ryqytiqrpa dseneieqpe
      901 flwrfgswtt ctatcgtgvq rqvvhcverl aglveerfcd altrpddqqr pcseepcpar
      961 wwvgewqkcs atcgraglmk rtvlciqsvg ldeqralqpa dcqhlakpda tapchpevpc
     1021 pspwavgnws ecsvscgngt qrrpvhcssg ssgapcdpae rpsperacsl pqchqkwdsd
     1081 wsgsgsssre ilneipyips nhipklnpli pnvpesndvn viteedfsar kgnvfvddfy
     1141 ydynfinfhe dlsyypftek epqpelstag tegpwempte lttelgaesq eqpapeeelt
     1201 papvdgqhte pgdlatnhll svvpedvgsa tpsyttpgfl aeeeeeeegt vpvphsehpp
     1261 atqssvshrs anhgqppwge phgavpsrss lgqgvpapgg phpagvgwgt agvdvslgpa
     1321 gwdsegrvst qghgpawsag rghrdsgqva lattsdihga apqpteqhgr agmpeemldp
     1381 raggqshgme rahlalptlq apgwgvagra gspqaavspp pagaggapmg qgghqpelht
     1441 ptaptstppv attappvsls pampgpapqv tssglgqqda lgtamptapa hgppahtags
     1501 plawgtqgvs qhlgpaspht kltshgtpls vpaprdpspw appgtptrdp slwappgtpt
     1561 rdpspweeee eealfppllp aaatakpswe vgnwsecsat cglgavwrpv rcssgsdggc
     1621 paadrpvpar rcslrpcsaw rvgnwskcsr scgggtkvrd vhcidtrdqr llrpfhcqag
     1681 laqppaqlpc hsapcldwyt sswrecsepc gggeqarlvt cpepgrcees vrpnstrpcn
     1741 sqpcttwvvg swgqcsapcg ggiqrrqvkc mdtrtgvaee dsslcdhepw pestqkcnpq
     1801 ecdssepgvp cerdrltfaf cqtlrllgrc plptvraqcc rscrqpgplp arghqrlarr
//
LOCUS       XP_041324827             306 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324827
VERSION     XP_041324827.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468893.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=30955
     CDS             1..306
                     /gene="LOC121354346"
                     /coded_by="XM_041468893.1:1..921"
                     /db_xref="GeneID:121354346"
ORIGIN      
        1 maggrragaa rrrprvalid saalpdqsrw sggplravig gaalsgarph arrgssaalt
       61 thqrgraaag ggwaalsppa gaggsyrals rcgteafrcq sacvcftart gppergygsa
      121 gpesrpgrga rggagpargg arggrgsrpp lrqtqaaivt lrqrrpisal rwrphvgaap
      181 sdwlsaarpp gfcpppaapl rpgavaapra raplprsapa prwlpelrrs rldaaerppp
      241 gggpartshv rgarevgcfs aspgalrgrr aaaaaphvai avarlgaaas sdraparpct
      301 pragtr
//
LOCUS       XP_041324828             634 aa            linear   VRT 06-MAY-2021
DEFINITION  transducin-like enhancer protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324828
VERSION     XP_041324828.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468894.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..634
                     /product="transducin-like enhancer protein 3"
                     /calculated_mol_wt=67850
     Region          <1..67
                     /region_name="TLE_N"
                     /note="Groucho/TLE N-terminal Q-rich domain; pfam03920"
                     /db_xref="CDD:461094"
     Region          350..>632
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          398..436
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          441..477
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          484..519
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          524..557
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          565..599
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          606..630
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..634
                     /gene="TLE3"
                     /coded_by="XM_041468894.1:10..1914"
                     /db_xref="GeneID:121354348"
ORIGIN      
        1 msyglniemh kqteiakrln tilaqimpfl sqehqqqvaq averakqvtm telnaiigqq
       61 qlqaqhlsha ahgppvqlpp hpsglqppgi ppvtgtssgl lalgalgsqa hlavkdeknh
      121 hdldhrerds sannsvspse slrasekhrs stdysidskk rkaeekdsms rydsdgdksd
      181 dlvvdvsned patprvspah sppengldka rglkkgdapn spasvassss tpssktkdlg
      241 hndksstpgl ksntptprnd aptpgtsstp glrpmpgkps gmdplasalr tpisiagsya
      301 apfammghhe mngsltspga yaglhnlppq msaaaaaaaa ygrspmvsfg ahpvalpsss
      361 pstsrflsap fpfhhrlprp qavphgplcp qnrdnyirsc kllpdgrtli vggeastlti
      421 wdlasptpri kaeltssapa cyalaispda kvcfsccsdg niavwdlhnq tlvrqfqght
      481 dgascidish dgtklwtggl dntvrswdlr egrqlqqhdf tsqifslgyc ptgewlavgm
      541 essnvevlhh tkpdkyqlhl hescvlslkf aycgkwfvst gkdnllnawr tpygasifqs
      601 kesssvlscd isaddkyivt gsgdkkatvy eviy
//
LOCUS       XP_041324829             926 aa            linear   VRT 06-MAY-2021
DEFINITION  IQ domain-containing protein H [Pyrgilauda ruficollis].
ACCESSION   XP_041324829
VERSION     XP_041324829.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468895.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..926
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..926
                     /product="IQ domain-containing protein H"
                     /calculated_mol_wt=101290
     CDS             1..926
                     /gene="IQCH"
                     /coded_by="XM_041468895.1:478..3258"
                     /db_xref="GeneID:121354349"
ORIGIN      
        1 mektnlkgna eavdfcdlrk apertelglr khaenyfnvi ngqeltlssa gnkevnskep
       61 pkwnpafgac qkqlvlppve pvtvqgcsks aprvcqgpqq vemdfkimld penvdnkagl
      121 khpndetrlp liakkksapv csqktgkdpt atspwalpaf hslgspfpla eedtpkgals
      181 ltgqrlilpa aqrtlpappa vpraapfpef prqhkksalg eissrldpen adtitfpkak
      241 eaiygtysss kgntaplpss nsmvstrksk pewrypaqql qsevhippqt qspqsaqpfq
      301 dpcldwdsav hpkapgvlal qhlhhsscgs ivgfleptek llkdhsvpla ainsqklaqi
      361 pldldfkenp tksdvlsvmk nqsavakiln gagqscggrg gsagaaagmq rwapspvpgp
      421 glqqqraagv istswrswsh larlrnalre arrrhlenfy srakhlaanw nrirtsrrti
      481 ihipslgysq hirehmpdla vqqnlqmgrl cdildanvdv iyicplalse ellqyynkll
      541 glqaavrsgn pedmadlqdr fkiltpeain sfpehhmcla tvlkysprtl qrlqvllqgr
      601 dayvvggvph lddlavadql qvpllgsepa vaqlystksg skrifasagv ptppgewdih
      661 sreqllrals qlvldnlevq rwlfkvdder agdgtafcdv tshlecyswi qrelqghgpe
      721 vwsesqarel alvkisqelp gllaqhvqpv nekrfptwek flqtfltqgg vieafpssgs
      781 vtnltvdlli eptgevtlls sgdqlhaegp lrssgttipq rsvdpevlka lclkigeack
      841 skgvlgyfsv dfvafthpqt reqqvwatdl dlcysdqlal sqllvyltdg nldcgssilq
      901 aplgakesks qgvqheetkp anevmg
//
LOCUS       XP_041324830             568 aa            linear   VRT 06-MAY-2021
DEFINITION  lactase-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324830
VERSION     XP_041324830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468896.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="lactase-like protein"
                     /calculated_mol_wt=65209
     Region          35..504
                     /region_name="Glycosyl hydrolases"
                     /note="A functionally diverse superfamily containing
                     glycosyl hydrolase families 1,5,10,17,44,72, and others;
                     cl23725"
                     /db_xref="CDD:474034"
     CDS             1..568
                     /gene="LCTL"
                     /coded_by="XM_041468896.1:1..1707"
                     /db_xref="GeneID:121354350"
ORIGIN      
        1 mrrdtlrcwa vlvaamalsv aedfpwtknn pgsfyygtfp agflwgvgss ayqtegawdk
       61 dgkgpsiwda fthrkgkvlr netgdsacdg yykvkddiql lkelkvnhyl lsiswprimp
      121 tgikaeqlne kgiqfyndti nsllennitp ivslyhwdlp qvlqekyggw qnisminyfn
      181 dyanlcfekf gdrvkhwitf snpwavaekg yetgehapgl klggcgayka ahhiikthak
      241 vwhsynstwr reqrgmvgis ltsgwgepvd phsqtdrdaa eryiqfhlgw fanpiyrgdy
      301 pevmknyvgr ksaqqglgts rlptfsvqek tyikgtsdfl gighfttryv lqksfpflqv
      361 ssyhtdpdla elvdpswpap gpkwlysvpw gfrrllnfik tqygnpliyv tengvsetmq
      421 cpqlcdewri qylkgyinei lkalndgvnv kgytawslld kfewnkgfse rfglyhidfk
      481 nknkprypka svdyyrkiir angfpnprev enwhrkamdt csathqhlaa dslithmemv
      541 teivlptvft lcilisivll ifylrnhs
//
LOCUS       XP_041324832             369 aa            linear   VRT 06-MAY-2021
DEFINITION  programmed cell death protein 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324832
VERSION     XP_041324832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468898.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="programmed cell death protein 7"
                     /calculated_mol_wt=42174
     Region          66..367
                     /region_name="PDCD7"
                     /note="Programmed cell death protein 7; pfam16021"
                     /db_xref="CDD:464979"
     CDS             1..369
                     /gene="PDCD7"
                     /coded_by="XM_041468898.1:1..1110"
                     /db_xref="GeneID:121354351"
ORIGIN      
        1 meewsgrrag rvlraarrrr gavlgralrr chggalraaa gawrsrrrsp pasrpssara
       61 vavaalgrva rvtalcralr rsedqgdepg warareeaea alrelrevvr plrepgygea
      121 lrrkaerark rrlrlqrrkh earaakeeea araaereaki dqwrakciqe veeknreqel
      181 kaaadsvlse vrkkqadtkr mtdvlrglek lrklrkeaaa rkgvcpppsa deafenqves
      241 lkallktrte lyeaeeralr vmlegeqeee rkrdmekkqk kerekllqqk lemdsklfgd
      301 paefplahll qpfrdyylqa ehsvaaliqi rhewdqylvp adhpegscip pgwvlpslpt
      361 ndtwatavr
//
LOCUS       XP_041324833             203 aa            linear   VRT 06-MAY-2021
DEFINITION  selenoprotein S, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041324833
VERSION     XP_041324833.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468899.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..203
                     /product="selenoprotein S"
     Region          34..203
                     /region_name="Selenoprotein_S"
                     /note="Selenoprotein S (SelS); pfam06936"
                     /db_xref="CDD:462043"
     CDS             1..203
                     /gene="SELENOS"
                     /coded_by="XM_041468899.1:<1..612"
                     /db_xref="GeneID:121354352"
ORIGIN      
        1 laerggpgre aaadgavigg agragpgpal grgglealqh tvgsvlssyg wyvllaavav
       61 yllvqkvsrs laarpsgrpg aaeaaeepdv vvrrqealaa arlrmqeeln aqaekykekq
      121 kqleeerrrq kiamwesmqe gksykgnlkl nqqevepgas asavpkskpn kkplrgggyn
      181 plsgegggtc swrpgrrgps agg
//
LOCUS       XP_041324834             395 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity mitogen-activated protein kinase kinase 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324834
VERSION     XP_041324834.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468900.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="dual specificity mitogen-activated protein
                     kinase kinase 1"
                     /calculated_mol_wt=43483
     Region          62..382
                     /region_name="PKc_MEK1"
                     /note="Catalytic domain of the dual-specificity Protein
                     Kinase, Mitogen-Activated Protein (MAP)/Extracellular
                     signal-Regulated Kinase (ERK) Kinase 1; cd06650"
                     /db_xref="CDD:270816"
     Site            order(74..78,82,95,97,127,143..146,149..150,153,190,
                     192..195,197,207..208,211,223..226,228,255,264)
                     /site_type="active"
                     /db_xref="CDD:270816"
     Site            order(74..78,80,82,95,97,127,143..146,149..150,152..153,
                     192,194..195,197,208)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270816"
     Site            order(77..78,190,192..194,211,223..226,228,255,264)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270816"
     Site            order(77..78,97,115,118,127,141,143,208..209,211..212,
                     215..216,219)
                     /site_type="other"
                     /note="noncompetitive inhibitor binding site [chemical
                     binding]"
                     /db_xref="CDD:270816"
     Site            order(81,101..102,137,230,234..237,313,316..317,320..321)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270816"
     Site            207..228
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270816"
     Site            order(221..226,228,230,234..237,311..313,316..317,320)
                     /site_type="other"
                     /note="KSR interface [polypeptide binding]"
                     /db_xref="CDD:270816"
     CDS             1..395
                     /gene="MAP2K1"
                     /coded_by="XM_041468900.1:256..1443"
                     /db_xref="GeneID:121354353"
ORIGIN      
        1 mpkkkpgpiq lnpapdgsav ngtssaetnl ealqkkleel eldeqqrkrl eafltqkqkv
       61 gelkdddfek iselgagngg vvfkvshkps glimarklih leikpairnq iirelqvlhe
      121 cnspyivgfy gafysdgeis icmehmdggs ldqvlkkagr ipeqilgkvs iavikgltyl
      181 rekhkimhrd vkpsnilvns rgeiklcdfg vsgqlidsma nsfvgtrsym sperlqgthy
      241 svqsdiwsmg lslvemaigr ypipppdske lelmfgcpve gdspvtetsp rqrapgrpms
      301 sygsdsrppm aifelldyiv nepppklpng vfgsefqdfv nkcliknpae radlkqlmih
      361 afikrseaee vdfagwlcst iglnqpstpt haagv
//
LOCUS       XP_041324835              96 aa            linear   VRT 06-MAY-2021
DEFINITION  snRNA-activating protein complex subunit 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324835
VERSION     XP_041324835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="snRNA-activating protein complex subunit 5"
                     /calculated_mol_wt=10922
     Region          1..84
                     /region_name="SNAPC5"
                     /note="snRNA-activating protein complex subunit 19, SNAPc
                     subunit 19; pfam15497"
                     /db_xref="CDD:464748"
     CDS             1..96
                     /gene="SNAPC5"
                     /coded_by="XM_041468901.1:40..330"
                     /db_xref="GeneID:121354354"
ORIGIN      
        1 mlsrlqelrr eeetllrvka alhdqlrrlr veelalqsmi rageenvpva lpalaedtqq
       61 tlgqmdneaa inqtelhlsl qddkeeeeee eeesds
//
LOCUS       XP_041324836            1385 aa            linear   VRT 06-MAY-2021
DEFINITION  uveal autoantigen with coiled-coil domains and ankyrin repeats
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324836
VERSION     XP_041324836.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468902.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1385
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1385
                     /product="uveal autoantigen with coiled-coil domains and
                     ankyrin repeats"
                     /calculated_mol_wt=155827
     Region          34..259
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          39..66
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          68..99
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          135..165
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(136,140..141,144..146,148..149,153,156,165,167,169,
                     173..174,177..179,181..182,186,189,198,200,202,206..207,
                     210..212,214..215,219,222,231)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          167..198
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          200..231
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          254..>574
                     /region_name="PLN02939"
                     /note="transferase, transferring glycosyl groups"
                     /db_xref="CDD:215507"
     Region          <524..1307
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1385
                     /gene="UACA"
                     /coded_by="XM_041468902.1:40..4197"
                     /db_xref="GeneID:121354355"
ORIGIN      
        1 mlvkykmpfl lapagfnpvc avfffrqlnp dwskyddrlm kaaergdvek vssilakkgv
       61 sptkldvegr safhvvaskg nldclntilv hgvditatda agrnalhlaa kyghalclqk
      121 llqyncpten vdlqgrtalh daamsdcsas iqllcdhgaa vnskdgdgrt plvlatqmcr
      181 pavcqllidr gadvnardkq srtalmlgce ygckdavevl lrngadvglt dglghdcayy
      241 arigdnidil alikaaaeds srgrdsfkrg qaeqkatsvs qkwgrgygaq eelrvfqkep
      301 stqdlelenq dlkdrvrevq eeqrmlldri sglqlqltek delkkilttk ekqqeeslrt
      361 iealkaklky yegdsagsgg nfgnrkedll lkqgqafave sqsrsmlrpl elslpslsps
      421 sekealkkel eslrscfgaa keeisklqre lalkssecra lasecerska esdsqvrqle
      481 dalkdvqkrm fdsegkvkqm qshflalkdh lasevasgsa kvteelkeql remkakyega
      541 saevgklrnq ikqnellvae fqrdegrlve enkrlqkelv kleterdkrg rnvtelegql
      601 retaaklaqs vsaeqfenmk gllskdvsek arrlaelege reklqaevvl lqreceshra
      661 qlarhvkaee hqqmrsgfeq reeelgkais elsqknealq kelerlqadn kvlkqqvqml
      721 kteiksqnvp lkiheelkka ndlavgdltk klfeitkkyn eskaeaekll aeknnlneni
      781 shlqavylsp eqhkkeleal ksngielekq laelqkkyde eqakvgklva entglreslr
      841 dqyvlatthe evktvlnstl ektngelsdl kgkigeikqe flrvneenga lknkvkllen
      901 qlnteyislk dheatvntln knvqelqesn aavraehqrg qdeirqlhae ieaqkkeldt
      961 iqecikskya pvasfedreq sleatvkelr aqlqeqeqrr rgseeeaqrc reesqklrsg
     1021 llsiqndlqq nyvlaekshq lerlcagsme elnqqlrall rkhagqegqq dgaaarrlpa
     1081 eqlqalreal grtveelrqa lsskeqrche etlragqlqq elaalkessv plveytqlke
     1141 glegevaair rsleekeaet rakseevlrl qaelrlsqqa laelqsrevv avaeyssmkg
     1201 aleaqvssma ghlasmsqky eqaceealqa rrselslkde kellqlrscs ieqeikdqke
     1261 rcdkslttii dlqkriqesa kqveakdnki tellndverl kqalnglsql tyttgipskr
     1321 hnqqvellqs qvktlqqqla daarqhqevv avyrthllsa vqghmdedvq aallqiirmr
     1381 qglvc
//
LOCUS       XP_041324837             233 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-8B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324837
VERSION     XP_041324837.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468903.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="ras-related protein Rab-8B isoform X1"
                     /calculated_mol_wt=26290
     Region          6..172
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            6..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(17..23,33..36,39..40,66,121..122,124..125,152..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(23..35,37..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(36,38,42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,169)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            109..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            167..172
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..233
                     /gene="RAB8B"
                     /coded_by="XM_041468903.1:127..828"
                     /db_xref="GeneID:121354356"
ORIGIN      
        1 maktydylfk llligdsgvg ktcllfrfse dafnttfist igidfkirti eldgkkiklq
       61 iwdtagqerf rtittayyrg amgimlvydi tneksfdnik nwirnieeha ssdvermilg
      121 nkcdmnekrq vskekgekla idygikflet sakssinvee afftlardim tklnrkmndn
      181 sssgagsqsl rnnttklllr aplnvdcdtq ipsgfcslsl ltcqallsqi wkl
//
LOCUS       XP_041324839             207 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-8B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324839
VERSION     XP_041324839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..207
                     /product="ras-related protein Rab-8B isoform X2"
                     /calculated_mol_wt=23497
     Region          6..172
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            6..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(17..23,33..36,39..40,66,121..122,124..125,152..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(23..35,37..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(36,38,42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,169)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            109..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            167..172
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..207
                     /gene="RAB8B"
                     /coded_by="XM_041468905.1:121..744"
                     /db_xref="GeneID:121354356"
ORIGIN      
        1 maktydylfk llligdsgvg ktcllfrfse dafnttfist igidfkirti eldgkkiklq
       61 iwdtagqerf rtittayyrg amgimlvydi tneksfdnik nwirnieeha ssdvermilg
      121 nkcdmnekrq vskekgekla idygikflet sakssinvee afftlardim tklnrkmndn
      181 sssgaggpvk itenrskkss ffrctll
//
LOCUS       XP_041324840             201 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-8B isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324840
VERSION     XP_041324840.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468906.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="ras-related protein Rab-8B isoform X3"
                     /calculated_mol_wt=22857
     Region          6..172
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            6..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(17..23,33..36,39..40,66,121..122,124..125,152..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(23..35,37..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(36,38,42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,169)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            109..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            167..172
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..201
                     /gene="RAB8B"
                     /coded_by="XM_041468906.1:125..730"
                     /db_xref="GeneID:121354356"
ORIGIN      
        1 maktydylfk llligdsgvg ktcllfrfse dafnttfist igidfkirti eldgkkiklq
       61 iwdtagqerf rtittayyrg amgimlvydi tneksfdnik nwirnieeha ssdvermilg
      121 nkcdmnekrq vskekgekla idygikflet sakssinvee afftlardim tklnrkmndn
      181 sssgaeefna illssaetee f
//
LOCUS       XP_041324841             201 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-8B isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324841
VERSION     XP_041324841.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468907.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="ras-related protein Rab-8B isoform X3"
                     /calculated_mol_wt=22857
     Region          6..172
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            6..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(17..23,33..36,39..40,66,121..122,124..125,152..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(23..35,37..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(36,38,42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,169)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            109..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            167..172
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..201
                     /gene="RAB8B"
                     /coded_by="XM_041468907.1:124..729"
                     /db_xref="GeneID:121354356"
ORIGIN      
        1 maktydylfk llligdsgvg ktcllfrfse dafnttfist igidfkirti eldgkkiklq
       61 iwdtagqerf rtittayyrg amgimlvydi tneksfdnik nwirnieeha ssdvermilg
      121 nkcdmnekrq vskekgekla idygikflet sakssinvee afftlardim tklnrkmndn
      181 sssgaeefna illssaetee f
//
LOCUS       XP_041324842             201 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-8B isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324842
VERSION     XP_041324842.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468908.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="ras-related protein Rab-8B isoform X3"
                     /calculated_mol_wt=22857
     Region          6..172
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            6..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(17..23,33..36,39..40,66,121..122,124..125,152..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(23..35,37..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(36,38,42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,169)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            109..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            167..172
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..201
                     /gene="RAB8B"
                     /coded_by="XM_041468908.1:125..730"
                     /db_xref="GeneID:121354356"
ORIGIN      
        1 maktydylfk llligdsgvg ktcllfrfse dafnttfist igidfkirti eldgkkiklq
       61 iwdtagqerf rtittayyrg amgimlvydi tneksfdnik nwirnieeha ssdvermilg
      121 nkcdmnekrq vskekgekla idygikflet sakssinvee afftlardim tklnrkmndn
      181 sssgaeefna illssaetee f
//
LOCUS       XP_041324843             200 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-8B isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324843
VERSION     XP_041324843.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468909.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="ras-related protein Rab-8B isoform X4"
                     /calculated_mol_wt=22569
     Region          6..172
                     /region_name="Rab8_Rab10_Rab13_like"
                     /note="Rab GTPase families 8, 10, 13 (Rab8, Rab10, Rab13);
                     cd01867"
                     /db_xref="CDD:206659"
     Site            6..10
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206659"
     Site            15..22
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206659"
     Site            order(17..23,33..36,39..40,66,121..122,124..125,152..153)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206659"
     Site            order(23..35,37..39)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206659"
     Site            order(33,38..46)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206659"
     Site            order(36,38,42..49,56,58)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:206659"
     Site            40
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206659"
     Site            order(41,43..45,60,62,69..70,73,77,79..82,169)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206659"
     Site            order(41..42,44,62..63,70,72,74..76)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206659"
     Site            41..45
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206659"
     Site            58..62
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206659"
     Site            63..66
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206659"
     Site            order(66,68..78)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206659"
     Site            69..74
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206659"
     Site            77..81
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206659"
     Site            86..91
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206659"
     Site            109..118
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206659"
     Site            121..124
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206659"
     Site            151..153
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206659"
     Site            167..172
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206659"
     CDS             1..200
                     /gene="RAB8B"
                     /coded_by="XM_041468909.1:125..727"
                     /db_xref="GeneID:121354356"
ORIGIN      
        1 maktydylfk llligdsgvg ktcllfrfse dafnttfist igidfkirti eldgkkiklq
       61 iwdtagqerf rtittayyrg amgimlvydi tneksfdnik nwirnieeha ssdvermilg
      121 nkcdmnekrq vskekgekla idygikflet sakssinvee afftlardim tklnrkmndn
      181 sssgaaqghk aseiippscc
//
LOCUS       XP_041324844            1733 aa            linear   VRT 06-MAY-2021
DEFINITION  chromodomain-helicase-DNA-binding protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324844
VERSION     XP_041324844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468910.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1733
                     /product="chromodomain-helicase-DNA-binding protein 2"
                     /calculated_mol_wt=200576
     Region          258..342
                     /region_name="CD1_tandem_CHD1-2_like"
                     /note="repeat 1 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18666"
                     /db_xref="CDD:349313"
     Site            order(260,310,312..313,317)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349313"
     Region          375..445
                     /region_name="CD2_tandem_CHD1-2_like"
                     /note="repeat 2 of the paired tandem chromodomains of
                     chromodomain helicase DNA-binding protein 1 and 2, and
                     similar proteins; cd18661"
                     /db_xref="CDD:349308"
     Site            order(410,427)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:349308"
     Region          462..698
                     /region_name="DEXHc_CHD2"
                     /note="DEAH-box helicase domain of the chromodomain
                     helicase DNA binding protein 2; cd18054"
                     /db_xref="CDD:350812"
     Region          466..>1019
                     /region_name="PLN03142"
                     /note="Probable chromatin-remodeling complex ATPase chain;
                     Provisional"
                     /db_xref="CDD:215601"
     Site            order(509..515,549,615..616)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350812"
     Region          1129..1217
                     /region_name="CDH1_2_SANT_HL1"
                     /note="CDH1/2 SANT-Helical linker 1; pfam18375"
                     /db_xref="CDD:465731"
     Region          1470..>1530
                     /region_name="DUF4208"
                     /note="Domain of unknown function (DUF4208); pfam13907"
                     /db_xref="CDD:464035"
     Region          <1679..>1726
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..1733
                     /gene="CHD2"
                     /coded_by="XM_041468910.1:1387..6588"
                     /db_xref="GeneID:121354357"
ORIGIN      
        1 mmrnkdksqg eegsvhsnas shsaseeasg sdsasqsese qgsesnssse ssesqseses
       61 estgsksqqt ppetkekpas kkeriadvkk mweeypdvyg vrrsnrsrqe psrfnikdea
      121 ssesenespk rrrqkqlkrk ikwkrevsag eededggeqg tsgesepepk kikarrpvqr
      181 rtvaktgvkk phkiqrgkrk kpdssedddd deddetpkrq trrraaknvs ykedddfetd
      241 sddliemtge gadeqqdnse tiekvldirl gkkgaigast tvyvteangn psadfdpekd
      301 egevqylikw kgwsyihstw eseeslqqqk vkglkklenf kkkeeeikqw lgkvspedve
      361 yfncqqelas elnkqyqive rviavktsks atghsdfpan srktssndpe ylckwmglpy
      421 aecswedeal iskkfqhcid sfnsrnnskt iptrdckvlk qrprfvalkk qpsyiggenl
      481 elrdyqlegl nwlahswckn nsvilademg lgktiqtisf lsylfhqhql ygpflvvvpl
      541 stltswqref evwapeinvv vyigdlmsrn mireyewihs qskrlkfnal ittyeillkd
      601 ktvlgsinwa flgvdeahrl knddsllykt lidfksnhrl litgtplqns lkelwsllhf
      661 impekfefwe dfeedhgkgr engyqslhkv lepfllrrvk kdvekslpak veqilrvems
      721 alqkqyykwi ltrnykalsk gtrgstsgfl nivmelkkcc nhcylikppe enerenglet
      781 lqslirssgk lilldklltr lrergnrvli fsqmvrmldi laeyltikhy pfqrldgsik
      841 geirkqaldh fnadgsedfc fllstraggl ginlasadtv vifdsdwnpq ndlqaqarah
      901 rigqkkqvni yrlvtkgtve eeiierakkk mvldhlviqr mdttgrtvld nnsgrsnsnp
      961 fnkeeltail kfgaedlfke legeesepqe mdideilrla etrenevsts atdellsqfk
     1021 vanfatmeee eteldersqk dwddiipeeq rkkveeeerq keleeiymlp rirsstkkaq
     1081 tndsesdaet krrlqrssgs esetddtdde krpkrrgrpr svrkdtvegf tdaeirrfik
     1141 aykkfglple rleciardae lvdksvadlk rlgelihnsc vsamqeyeeq lkenpaegkg
     1201 pgkrrgptik isgvqvnvks iiqheeefem lhksipsdpe erkkyrltcr vkaahfdvdw
     1261 gveedsrllv giyehgygnw eliktdpelk lsdkilpvet dkkpqgkqlq trvdyllkll
     1321 kkdldkkenm kdgeegklkk rkprvkkenk apkvkdehgn elssprhsdn qseegevked
     1381 gldkspvkkk qkkkenkenk ekqtsskkek esdkekkktk dkkekpkgge aksgskgkrs
     1441 qgpvhitags epipigeded ddldqetfsi ckermrpvkk alkqldkpdk gltvqeqleh
     1501 trncllkigd riseclkayt dqdhiklwrr preqniftld rgdwqrdrkf nyggnsnqmw
     1561 ggerhhqyeq hwykdhhyge rrsrgdphrs sgnyrpnnls rkrpyeqyns drdhrghrdy
     1621 ydrhhhdskr rrsddfrpqn yhqqdfrrms dhrppmgyhg qgpsdhyrsf htdklgdykq
     1681 plppshpavs dprsppsqks phdskspldh rspldrsleq knnpdynwni rka
//
LOCUS       XP_041324845             172 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane protein FAM174B [Pyrgilauda ruficollis].
ACCESSION   XP_041324845
VERSION     XP_041324845.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468911.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="membrane protein FAM174B"
                     /calculated_mol_wt=18005
     Region          <68..171
                     /region_name="DUF1180"
                     /note="Protein of unknown function (DUF1180); pfam06679"
                     /db_xref="CDD:429067"
     CDS             1..172
                     /gene="FAM174B"
                     /coded_by="XM_041468911.1:1..519"
                     /db_xref="GeneID:121354358"
ORIGIN      
        1 mrrtvlsste pllppshgss egvtardkss eqednhqsqe lfvlsegaap apaaagpeaa
       61 arpreapgae aangsrppaa pgpgnhsgar lspvpamlrd lsalkaavig acaltaalia
      121 clllrvfrsg krikktrkyd iittpaerve maplneedde dedstvfdvk yr
//
LOCUS       XP_041324846            2089 aa            linear   VRT 06-MAY-2021
DEFINITION  aggrecan core protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324846
VERSION     XP_041324846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468912.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2089
                     /product="aggrecan core protein"
                     /calculated_mol_wt=222154
     Region          33..151
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          47..51
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          68..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          112..116
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          126..131
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          144..147
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..243
                     /region_name="Link_domain_CSPGs_modules_1_3"
                     /note="this extracellular link domain is found in the
                     first and third link modules of the chondroitin sulfate
                     proteoglycan core protein (CSPG) aggrecan. In addition, it
                     is found in the first link module of three other CSPGs:
                     versican, neurocan, and brevican; cd03517"
                     /db_xref="CDD:239594"
     Site            159..160
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239594"
     Region          250..345
                     /region_name="Link_domain_CSPGs_modules_2_4"
                     /note="this link domain is found in the second and fourth
                     link modules of the chondroitin sulfate proteoglycan core
                     protein (CSPG) aggrecan and, in the second link module of
                     three other CSPGs: versican, neurocan, and brevican. The
                     link domain is a hyaluronan...; cd03520"
                     /db_xref="CDD:239597"
     Site            257..258
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239597"
     Region          528..622
                     /region_name="Link_domain_CSPGs_modules_1_3"
                     /note="this extracellular link domain is found in the
                     first and third link modules of the chondroitin sulfate
                     proteoglycan core protein (CSPG) aggrecan. In addition, it
                     is found in the first link module of three other CSPGs:
                     versican, neurocan, and brevican; cd03517"
                     /db_xref="CDD:239594"
     Site            538..539
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239594"
     Region          629..724
                     /region_name="Link_domain_CSPGs_modules_2_4"
                     /note="this link domain is found in the second and fourth
                     link modules of the chondroitin sulfate proteoglycan core
                     protein (CSPG) aggrecan and, in the second link module of
                     three other CSPGs: versican, neurocan, and brevican. The
                     link domain is a hyaluronan...; cd03520"
                     /db_xref="CDD:239597"
     Site            636..637
                     /site_type="other"
                     /note="putative hyaluronan binding site [chemical
                     binding]"
                     /db_xref="CDD:239597"
     Region          <935..>1275
                     /region_name="PRK15319"
                     /note="fibronectin-binding autotransporter adhesin ShdA"
                     /db_xref="CDD:185219"
     Region          1833..1869
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1833,1836,1850)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1875..1998
                     /region_name="CLECT_CSPGs"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in chondroitin sulfate proteoglycan core proteins;
                     cd03588"
                     /db_xref="CDD:153058"
     Site            order(1893,1925..1928,1957,1967,1975,1977,1983,1986,
                     1988..1990)
                     /site_type="active"
                     /note="fibronectin type III repeats 3-5 binding site
                     [active]"
                     /db_xref="CDD:153058"
     Site            order(1936,1940,1963,1969..1970)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153058"
     Site            order(1940,1970)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:153058"
     Site            order(1960,1962,1969,1983..1984)
                     /site_type="other"
                     /note="carbohydrate binding site"
                     /db_xref="CDD:153058"
     Region          2002..2058
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2012,2032)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..2089
                     /gene="ACAN"
                     /coded_by="XM_041468912.1:1..6270"
                     /db_xref="GeneID:121354359"
ORIGIN      
        1 mttlllvfvc lqvitaadsv elsdssdgle vkipeqsplr vilgsslnip cyfnipeeqd
       61 tsvmltprik wsklsngtev vllvatggki rlnseyrevi slpnypaipt datleikalr
      121 snhtgiyrce vmygiedrqd sievlvkgiv fhyraistry tlnfekakqa ciqnsaviat
      181 peqlqaayed gyeqcdagwl adqtvrypih wprercygdk defpgvrtyg vrepdetydv
      241 ycyaeqmqgk vfyatapekf tfqeafdkcr slgarlattg elylawkdgm dmcsagwlad
      301 rsvrypisra rpncggnlvg vrtvylyvnq tgyphpdsry daicysgddi eslvpgqfid
      361 eigselgsaf tvqtvtqtev elplsrnate eeargsiatl epieitptat rldegftalp
      421 dlftatltae taateeenvt redvtavwtv peeattidlg tavtisafgt agttetaevs
      481 sveevvgvta tpglepasvf tvedqlvrvt aapgaghlpe qpisptgvvf hyraatsrya
      541 fsfvqaqkac lensaviatp qqlqaayeag fdqcdagwlr dqtvrypivn prnncigdke
      601 stpgvrsygm rpasetydvy cyidrlkgdv ffatqpeqft fpeaqrhces qnatlasvgq
      661 lhaawkqgld rcyagwladg slrypivspr pacggdapgv rtvyqhhnqt gfpdplsrhh
      721 afcfralppv eeegvtpffe dvlatqvipg vegvpsgeev taeteaatqp enqtawgtev
      781 fptdvsllsv spsafppati vpeeastnvs isevsgevte sgehqvsges sasgwipgvp
      841 dtsgepisgg felsgdhsgi gesglpsvdl hvsgfppges glpsgdligv ssgvvgylps
      901 aeeetsvsis ripeisgmps evessglpfg asgeisgtel vsgvssgees gvtsgfptis
      961 lvdttlvevv taaterqeeg kgsigvsgeg dlsgfpssgw dssggtqglp segepsgeps
     1021 gvpelsglss ggselsglps gldgsgetsg theisglvdl sglssgiegs teasgvtfvd
     1081 atleevttts pvtraeaket letsglpsgd edgsgmvsgs ldisgepsgh vdfggsvsgv
     1141 levsgypsgv tdssgdisgv dvtsgllsge esgltsgfpt vslvdttlve vvtqtsvaqe
     1201 vgegpsgmie isgftsgdrg lsgegsgave tsgfpsgdls eepsgiayis gdfsgatdls
     1261 gqsstvadis geasglpgit lvtsdfvevv trptvsqelg getatfpysl gpsgeasgsg
     1321 elsgetsalp esaletstay eisgetsafp etgietstih eisgeasafp efntetstiq
     1381 eisgetsafp eifpetstts tgqeasgets afpesstets tiqeisgets gfpeiriets
     1441 tsqdisgets afpeirietf tsqeargeis gypeisiets tvhetsgets afpeisiets
     1501 tvheisgess afpeiriety tnqeargets aypeisiets tvhetsgets afpeisiets
     1561 tvheisgdvs sfpeisiets tihetsgeip afpeiriets tgeeargets tfpeisiets
     1621 tvhdisgets afpefsietp tsqearsets aypeifiets tvqevsgets afpeirvgtp
     1681 tsqeargetf peisleastv hetsgeasal paaniktaat slasgepfgt peqkeipdpt
     1741 sgavthsitg isgetsvpdi vistrtpdve pteglrnpee aqlemepspp vvseqeteta
     1801 vapdnphlla tttaalpqvs qeaidalgpt tedtdvchss pclngatcvd gidsfkcfcl
     1861 psyggdlcei dlenceegwt kfqghcyrhf eeretwmdae trcrqhqahl ssiitpeeqe
     1921 fvnshaqdyq wiglsdrave ndfrwsdghs lqyenwrpnq pdnffsaged cvvmiwhekg
     1981 ewndvpcnyh lpftckkgtv acgdppaven artfgrkker yeinslvryq ceqgyiqrhv
     2041 ptircqpngq weqpriscln pssyqrrlyk rsprsrskas gsavhrrah
//
LOCUS       XP_041324847             407 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324847
VERSION     XP_041324847.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468913.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..407
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..407
                     /product="homer protein homolog 2 isoform X1"
                     /calculated_mol_wt=45853
     Region          32..140
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(53,99,103,118)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <122..386
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..407
                     /gene="HOMER2"
                     /coded_by="XM_041468913.1:164..1387"
                     /db_xref="GeneID:121354361"
ORIGIN      
        1 mcevgtrppl aaergeppgg aaaaercrdm geqpifttra hvfqidpstk knwvpaskqa
       61 vtvsyfydst rnsyriisvd gakviinsti tpnmtftkts qkfgqwadsr antvfglgfp
      121 seqqltkfae kfqevkeaak lardrsqeki etssnhsqts faakmkremq etpsvrlcvv
      181 lqesgretps strassvngt ddekashggp aeahlksend klkfalaqss snvkkwetel
      241 qslresnarl stalqesaas iehwkkqfsa ckeendqlrg kieeleeqcn einkekerna
      301 qlsrrlqele telqdkelel eelrkqgeii pelmsecesv seqlqaaekk nkdleekvrt
      361 lrteveenkh rqtnlktelk nfldvldgki delhdfrqgl sklgvdn
//
LOCUS       XP_041324848             398 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324848
VERSION     XP_041324848.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468914.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="homer protein homolog 2 isoform X2"
                     /calculated_mol_wt=44832
     Region          32..140
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(53,99,103,118)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <122..377
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..398
                     /gene="HOMER2"
                     /coded_by="XM_041468914.1:164..1360"
                     /db_xref="GeneID:121354361"
ORIGIN      
        1 mcevgtrppl aaergeppgg aaaaercrdm geqpifttra hvfqidpstk knwvpaskqa
       61 vtvsyfydst rnsyriisvd gakviinsti tpnmtftkts qkfgqwadsr antvfglgfp
      121 seqqltkfae kfqevkeaak lardrsqeki etssnhsqem qetpsvrlcv vlqesgretp
      181 sstrassvng tddekashgg paeahlksen dklkfalaqs ssnvkkwete lqslresnar
      241 lstalqesaa siehwkkqfs ackeendqlr gkieeleeqc neinkekern aqlsrrlqel
      301 etelqdkele leelrkqgei ipelmseces vseqlqaaek knkdleekvr tlrteveenk
      361 hrqtnlktel knfldvldgk idelhdfrqg lsklgvdn
//
LOCUS       XP_041324849             392 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324849
VERSION     XP_041324849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..392
                     /product="homer protein homolog 2 isoform X3"
                     /calculated_mol_wt=44139
     Region          32..140
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(53,99,103,118)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <122..371
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..392
                     /gene="HOMER2"
                     /coded_by="XM_041468915.1:164..1342"
                     /db_xref="GeneID:121354361"
ORIGIN      
        1 mcevgtrppl aaergeppgg aaaaercrdm geqpifttra hvfqidpstk knwvpaskqa
       61 vtvsyfydst rnsyriisvd gakviinsti tpnmtftkts qkfgqwadsr antvfglgfp
      121 seqqltkfae kfqevkeaak lardrsqeki etssnhsqts faakmkresg retpsstras
      181 svngtddeka shggpaeahl ksendklkfa laqsssnvkk wetelqslre snarlstalq
      241 esaasiehwk kqfsackeen dqlrgkieel eeqcneinke kernaqlsrr lqeletelqd
      301 keleleelrk qgeiipelms ecesvseqlq aaekknkdle ekvrtlrtev eenkhrqtnl
      361 ktelknfldv ldgkidelhd frqglsklgv dn
//
LOCUS       XP_041324850             383 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324850
VERSION     XP_041324850.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468916.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..383
                     /product="homer protein homolog 2 isoform X4"
                     /calculated_mol_wt=43118
     Region          32..140
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(53,99,103,118)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <122..362
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..383
                     /gene="HOMER2"
                     /coded_by="XM_041468916.1:164..1315"
                     /db_xref="GeneID:121354361"
ORIGIN      
        1 mcevgtrppl aaergeppgg aaaaercrdm geqpifttra hvfqidpstk knwvpaskqa
       61 vtvsyfydst rnsyriisvd gakviinsti tpnmtftkts qkfgqwadsr antvfglgfp
      121 seqqltkfae kfqevkeaak lardrsqeki etssnhsqes gretpsstra ssvngtddek
      181 ashggpaeah lksendklkf alaqsssnvk kwetelqslr esnarlstal qesaasiehw
      241 kkqfsackee ndqlrgkiee leeqcneink ekernaqlsr rlqeletelq dkeleleelr
      301 kqgeiipelm secesvseql qaaekknkdl eekvrtlrte veenkhrqtn lktelknfld
      361 vldgkidelh dfrqglsklg vdn
//
LOCUS       XP_041324852             344 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324852
VERSION     XP_041324852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468918.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=35304
     CDS             1..344
                     /gene="LOC121354362"
                     /coded_by="XM_041468918.1:1..1035"
                     /db_xref="GeneID:121354362"
ORIGIN      
        1 mekrkhkqag dirdnkrlqg qrrrrgaceg ltphsalspa gntarrdlpl hgpegqrgrq
       61 rahpgvfysk mnlfvgqecg rrrpssrgpl alppprspqv tpagggeagr aavplnsipw
      121 ftsppspcnn ysravapppa prglpawapp isarprhseg netrrkgkkk fgeeragpag
      181 aagpaqvrer ggagaagpgl rqrprtatgr gdggrpphwp rgaaeglcgg fplrapdprr
      241 qrargcgata gagpagsfsa ffggsvlvsp ppaggcvrrs hpgaevfvlv slggrerqsr
      301 psasaapagp gpapsarpag ssagpkpcpp qgspsperap lplg
//
LOCUS       XP_041324853             845 aa            linear   VRT 06-MAY-2021
DEFINITION  cell cycle progression protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324853
VERSION     XP_041324853.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468919.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..845
                     /product="cell cycle progression protein 1 isoform X1"
                     /calculated_mol_wt=98069
     Region          <334..>565
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..845
                     /gene="CCPG1"
                     /coded_by="XM_041468919.1:32..2569"
                     /db_xref="GeneID:121354364"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdietvtse ngstndnhef vseeyvslqe eeqaidvqdq
       61 cshdeeipav dntlsgfvet qtvpegnkek vpddgscigt isddsdivtl eapkpeetqs
      121 qeeapadgee aqssedfnmg sssssqyafs hvetvtwlek lwkipgcvrg wgnevkehvs
      181 rslpfqvfss qaspeesssd esssrsspav rkrrprkrgv sgsepegaap aepeaepprd
      241 eqrqrqfssg lnrciilalv iaismgfghf ygkpegtvqv qkrqqlvtkt reikdlkddl
      301 yqcqqeqgdq vhhkvgslkg dlatcltfte vekksfdsqk kslaaenqhl reslekeeka
      361 laslqeelrk lrqqirnled kgsstesivi enqklrehle eekqrnsnfl rqketlfaea
      421 qmlrreldke rhvtealkke leqlssrhtp dsaaddddet lrenqeietl rgrlaelekk
      481 lnfeqqrsdl weklyveakd qsekqeinen gqkksakgqs ksrkksketf fgsvketfda
      541 mknstkefvr hhkekikqak eavkenlkkf sdsvkstfrh fkdttknifd ekeksssdkr
      601 yeankkartf yrdhnsyenl khmhyrgphm pkesrngrkh hfttyekdsd sqkclndhlc
      661 nrkhqfalkg csgifecahq efislfnrvs dpirvdefnr lmrkylqqvv hnfhhwrele
      721 nfinkffhng lfihdqmlft dfvndvkdyl edmkeyqsnn ekvfedldky vyryyfhydn
      781 spqygpsrpk rpftqsensr hekqaqkyqh rnkregkwhk hgrtngrhma nleielgqlp
      841 fdpky
//
LOCUS       XP_041324854             841 aa            linear   VRT 06-MAY-2021
DEFINITION  cell cycle progression protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324854
VERSION     XP_041324854.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468920.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..841
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..841
                     /product="cell cycle progression protein 1 isoform X2"
                     /calculated_mol_wt=97657
     Region          <330..>561
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..841
                     /gene="CCPG1"
                     /coded_by="XM_041468920.1:32..2557"
                     /db_xref="GeneID:121354364"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdietvtse ngstndnhef vseeyvslqe eeqaidvqdq
       61 cshdeeipav dntlsgfvet qtvpegnkek vpddgscigt isddsdivtl eapkpeetqs
      121 qeeapadgee aqssedfnmg sssssqyafs hvetvtwlek lwkipgcvrg wgnevkehvs
      181 rslpfqvfss qaspeesssd esssrsspav rkrrprkrgv sgsepegaap aepeaepprd
      241 eqrqrqfssg lnrciilalv iaismgfghf ygtvqvqkrq qlvtktreik dlkddlyqcq
      301 qeqgdqvhhk vgslkgdlat cltftevekk sfdsqkksla aenqhlresl ekeekalasl
      361 qeelrklrqq irnledkgss tesivienqk lrehleeekq rnsnflrqke tlfaeaqmlr
      421 reldkerhvt ealkkeleql ssrhtpdsaa ddddetlren qeietlrgrl aelekklnfe
      481 qqrsdlwekl yveakdqsek qeinengqkk sakgqsksrk ksketffgsv ketfdamkns
      541 tkefvrhhke kikqakeavk enlkkfsdsv kstfrhfkdt tknifdekek sssdkryean
      601 kkartfyrdh nsyenlkhmh yrgphmpkes rngrkhhftt yekdsdsqkc lndhlcnrkh
      661 qfalkgcsgi fecahqefis lfnrvsdpir vdefnrlmrk ylqqvvhnfh hwrelenfin
      721 kffhnglfih dqmlftdfvn dvkdyledmk eyqsnnekvf edldkyvyry yfhydnspqy
      781 gpsrpkrpft qsensrhekq aqkyqhrnkr egkwhkhgrt ngrhmanlei elgqlpfdpk
      841 y
//
LOCUS       XP_041324857             845 aa            linear   VRT 06-MAY-2021
DEFINITION  cell cycle progression protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324857
VERSION     XP_041324857.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468923.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..845
                     /product="cell cycle progression protein 1 isoform X1"
                     /calculated_mol_wt=98069
     Region          <334..>565
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..845
                     /gene="CCPG1"
                     /coded_by="XM_041468923.1:65..2602"
                     /db_xref="GeneID:121354364"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdietvtse ngstndnhef vseeyvslqe eeqaidvqdq
       61 cshdeeipav dntlsgfvet qtvpegnkek vpddgscigt isddsdivtl eapkpeetqs
      121 qeeapadgee aqssedfnmg sssssqyafs hvetvtwlek lwkipgcvrg wgnevkehvs
      181 rslpfqvfss qaspeesssd esssrsspav rkrrprkrgv sgsepegaap aepeaepprd
      241 eqrqrqfssg lnrciilalv iaismgfghf ygkpegtvqv qkrqqlvtkt reikdlkddl
      301 yqcqqeqgdq vhhkvgslkg dlatcltfte vekksfdsqk kslaaenqhl reslekeeka
      361 laslqeelrk lrqqirnled kgsstesivi enqklrehle eekqrnsnfl rqketlfaea
      421 qmlrreldke rhvtealkke leqlssrhtp dsaaddddet lrenqeietl rgrlaelekk
      481 lnfeqqrsdl weklyveakd qsekqeinen gqkksakgqs ksrkksketf fgsvketfda
      541 mknstkefvr hhkekikqak eavkenlkkf sdsvkstfrh fkdttknifd ekeksssdkr
      601 yeankkartf yrdhnsyenl khmhyrgphm pkesrngrkh hfttyekdsd sqkclndhlc
      661 nrkhqfalkg csgifecahq efislfnrvs dpirvdefnr lmrkylqqvv hnfhhwrele
      721 nfinkffhng lfihdqmlft dfvndvkdyl edmkeyqsnn ekvfedldky vyryyfhydn
      781 spqygpsrpk rpftqsensr hekqaqkyqh rnkregkwhk hgrtngrhma nleielgqlp
      841 fdpky
//
LOCUS       XP_041324858             813 aa            linear   VRT 06-MAY-2021
DEFINITION  cell cycle progression protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324858
VERSION     XP_041324858.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468924.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="cell cycle progression protein 1 isoform X3"
                     /calculated_mol_wt=94306
     Region          <302..>533
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..813
                     /gene="CCPG1"
                     /coded_by="XM_041468924.1:32..2473"
                     /db_xref="GeneID:121354364"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdietvtse ngstndnhef vseeyvslqe eeqaidvqdq
       61 cshdeeipav dntlsgfvet qtvpegnkek vpddgscigt isddsdivtl eapkpeetqs
      121 qeeapadgee aqssedfnmg sssssqyafs hvetvfssqa speesssdes ssrsspavrk
      181 rrprkrgvsg sepegaapae peaepprdeq rqrqfssgln rciilalvia ismgfghfyg
      241 kpegtvqvqk rqqlvtktre ikdlkddlyq cqqeqgdqvh hkvgslkgdl atcltfteve
      301 kksfdsqkks laaenqhlre slekeekala slqeelrklr qqirnledkg sstesivien
      361 qklrehleee kqrnsnflrq ketlfaeaqm lrreldkerh vtealkkele qlssrhtpds
      421 aaddddetlr enqeietlrg rlaelekkln feqqrsdlwe klyveakdqs ekqeinengq
      481 kksakgqsks rkksketffg svketfdamk nstkefvrhh kekikqakea vkenlkkfsd
      541 svkstfrhfk dttknifdek eksssdkrye ankkartfyr dhnsyenlkh mhyrgphmpk
      601 esrngrkhhf ttyekdsdsq kclndhlcnr khqfalkgcs gifecahqef islfnrvsdp
      661 irvdefnrlm rkylqqvvhn fhhwrelenf inkffhnglf ihdqmlftdf vndvkdyled
      721 mkeyqsnnek vfedldkyvy ryyfhydnsp qygpsrpkrp ftqsensrhe kqaqkyqhrn
      781 kregkwhkhg rtngrhmanl eielgqlpfd pky
//
LOCUS       XP_041324859             809 aa            linear   VRT 06-MAY-2021
DEFINITION  cell cycle progression protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324859
VERSION     XP_041324859.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468925.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..809
                     /product="cell cycle progression protein 1 isoform X4"
                     /calculated_mol_wt=93895
     Region          <298..>529
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     CDS             1..809
                     /gene="CCPG1"
                     /coded_by="XM_041468925.1:32..2461"
                     /db_xref="GeneID:121354364"
ORIGIN      
        1 msenssdsds scgwtvinhe gsdietvtse ngstndnhef vseeyvslqe eeqaidvqdq
       61 cshdeeipav dntlsgfvet qtvpegnkek vpddgscigt isddsdivtl eapkpeetqs
      121 qeeapadgee aqssedfnmg sssssqyafs hvetvfssqa speesssdes ssrsspavrk
      181 rrprkrgvsg sepegaapae peaepprdeq rqrqfssgln rciilalvia ismgfghfyg
      241 tvqvqkrqql vtktreikdl kddlyqcqqe qgdqvhhkvg slkgdlatcl tftevekksf
      301 dsqkkslaae nqhlreslek eekalaslqe elrklrqqir nledkgsste sivienqklr
      361 ehleeekqrn snflrqketl faeaqmlrre ldkerhvtea lkkeleqlss rhtpdsaadd
      421 ddetlrenqe ietlrgrlae lekklnfeqq rsdlweklyv eakdqsekqe inengqkksa
      481 kgqsksrkks ketffgsvke tfdamknstk efvrhhkeki kqakeavken lkkfsdsvks
      541 tfrhfkdttk nifdekekss sdkryeankk artfyrdhns yenlkhmhyr gphmpkesrn
      601 grkhhfttye kdsdsqkcln dhlcnrkhqf alkgcsgife cahqefislf nrvsdpirvd
      661 efnrlmrkyl qqvvhnfhhw relenfinkf fhnglfihdq mlftdfvndv kdyledmkey
      721 qsnnekvfed ldkyvyryyf hydnspqygp srpkrpftqs ensrhekqaq kyqhrnkreg
      781 kwhkhgrtng rhmanleiel gqlpfdpky
//
LOCUS       XP_041324860             520 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI mannosyltransferase 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324860
VERSION     XP_041324860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468926.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="GPI mannosyltransferase 3 isoform X1"
                     /calculated_mol_wt=59417
     Region          43..498
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..520
                     /gene="PIGB"
                     /coded_by="XM_041468926.1:608..2170"
                     /db_xref="GeneID:121354365"
ORIGIN      
        1 mpeavrlrkr rsvlyssagg taaqrragaa apapllvlal alrtlncflv qtsfvpdeyw
       61 qslevahrmv fsygyltwew tsslrgysyp lifasmykal qllakdnvql liwvprlaqa
      121 vlaafadvkl yslvqhlens etakfvffcq lcswftwysc trtltntmet iltifalsyy
      181 pikgskmgns ckylalvala ivirptavip wmplvfshfl qerrkadlil hncipvglvt
      241 igtsliidrv ffgewvlvql nflkfnvlqn lgtfygshpw hwyftqglpv vlgphlpffi
      301 hgcalaprqy rilllaviwt llvystlshk efrfiypvlp fcmifcgysl rylkawkkta
      361 asflllsnlv palytglvhq rgtldvmshi qqlcnhsqqs qafvfilmpc hstpfyshvh
      421 cplkmrflqc ppnltgnasy vdeadvfysn plgwlnkefy ndtllpthli lfnvleqeis
      481 sflalrgyek tatvfhthvp qgrvgshisi yrrkteinyp
//
LOCUS       XP_041324861             452 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI mannosyltransferase 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324861
VERSION     XP_041324861.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468927.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..452
                     /product="GPI mannosyltransferase 3 isoform X2"
                     /calculated_mol_wt=51982
     Region          2..430
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..452
                     /gene="PIGB"
                     /coded_by="XM_041468927.1:152..1510"
                     /db_xref="GeneID:121354365"
ORIGIN      
        1 mvfsygyltw ewtsslrgys yplifasmyk alqllakdnv qlliwvprla qavlaafadv
       61 klyslvqhle nsetakfvff cqlcswftwy sctrtltntm etiltifals yypikgskmg
      121 nsckylalva laivirptav ipwmplvfsh flqerrkadl ilhncipvgl vtigtsliid
      181 rvffgewvlv qlnflkfnvl qnlgtfygsh pwhwyftqgl pvvlgphlpf fihgcalapr
      241 qyrilllavi wtllvystls hkefrfiypv lpfcmifcgy slrylkawkk taasflllsn
      301 lvpalytglv hqrgtldvms hiqqlcnhsq qsqafvfilm pchstpfysh vhcplkmrfl
      361 qcppnltgna syvdeadvfy snplgwlnke fyndtllpth lilfnvleqe issflalrgy
      421 ektatvfhth vpqgrvgshi siyrrktein yp
//
LOCUS       XP_041324862             423 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein assembly factor 4, axonemal isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324862
VERSION     XP_041324862.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468928.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..423
                     /product="dynein assembly factor 4, axonemal isoform X1"
                     /calculated_mol_wt=48615
     Region          10..86
                     /region_name="p23_DYX1C1_like"
                     /note="p23_like domain found in proteins similar to
                     dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein,
                     DYX1C1. The human gene encoding this protein is a
                     positional candidate gene for developmental dyslexia (DD),
                     it is located on 15q21.3 by the DYX1 DD...; cd06469"
                     /db_xref="CDD:107226"
     Region          <93..180
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          293..321
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(294,297..298,301..302,304,328,331..332,335..336,
                     338..339,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <300..>402
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          326..356
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          367..397
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..423
                     /gene="DNAAF4"
                     /coded_by="XM_041468928.1:42..1313"
                     /db_xref="GeneID:121354367"
ORIGIN      
        1 mpvwlrehsw rqtltavyls lplrgaratp anifcseqyl kvsippflfe avlyapiddt
       61 nstakigngn ifftlykkep alwdsltlan adkeklqylr enavvkaqek akeeteakki
      121 tkqehkkyal eatmkleeae rkriedlkek erqkvakele lwknqqkdgd kyksiqkkee
      181 lhqeieplke kknekmnktr ipnegssktr lkstrghgsc sifsqnlkee qlpapraaat
      241 ikvnftprvf ptalresrva eeeewlrkqa earriinsdl seledlkeee knpdwlkdkg
      301 nkmfamgdyl gavnaynlav rlnnklplly lnraachlkl rnlhkaieds skalelltpp
      361 vpdnenarvk ahvrrgtafc qlelypeglq dyeaalkidp knkiiekdae kirhliqgtm
      421 qss
//
LOCUS       XP_041324863             408 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein assembly factor 4, axonemal isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324863
VERSION     XP_041324863.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468929.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="dynein assembly factor 4, axonemal isoform X2"
                     /calculated_mol_wt=46889
     Region          10..86
                     /region_name="p23_DYX1C1_like"
                     /note="p23_like domain found in proteins similar to
                     dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein,
                     DYX1C1. The human gene encoding this protein is a
                     positional candidate gene for developmental dyslexia (DD),
                     it is located on 15q21.3 by the DYX1 DD...; cd06469"
                     /db_xref="CDD:107226"
     Region          <93..180
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          293..321
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(294,297..298,301..302,304,328,331..332,335..336,
                     338..339,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <296..>387
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          326..356
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          367..393
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..408
                     /gene="DNAAF4"
                     /coded_by="XM_041468929.1:42..1268"
                     /db_xref="GeneID:121354367"
ORIGIN      
        1 mpvwlrehsw rqtltavyls lplrgaratp anifcseqyl kvsippflfe avlyapiddt
       61 nstakigngn ifftlykkep alwdsltlan adkeklqylr enavvkaqek akeeteakki
      121 tkqehkkyal eatmkleeae rkriedlkek erqkvakele lwknqqkdgd kyksiqkkee
      181 lhqeieplke kknekmnktr ipnegssktr lkstrghgsc sifsqnlkee qlpapraaat
      241 ikvnftprvf ptalresrva eeeewlrkqa earriinsdl seledlkeee knpdwlkdkg
      301 nkmfamgdyl gavnaynlav rlnnklplly lnraachlkl rnlhkaieds skalelltpp
      361 vpdnenarvk ahvrrgtafc qlelypegss llqnsplmht hvyrcicp
//
LOCUS       XP_041324864             389 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein assembly factor 4, axonemal isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324864
VERSION     XP_041324864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="dynein assembly factor 4, axonemal isoform X3"
                     /calculated_mol_wt=44793
     Region          10..86
                     /region_name="p23_DYX1C1_like"
                     /note="p23_like domain found in proteins similar to
                     dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein,
                     DYX1C1. The human gene encoding this protein is a
                     positional candidate gene for developmental dyslexia (DD),
                     it is located on 15q21.3 by the DYX1 DD...; cd06469"
                     /db_xref="CDD:107226"
     Region          <93..180
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          293..321
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(294,297..298,301..302,304,328,331..332,335..336,
                     338..339,370,373..374,377..378,381)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          <296..>389
                     /region_name="3a0801s09"
                     /note="mitochondrial precursor proteins import receptor
                     (72 kDa mitochondrial outermembrane protein)
                     (mitochondrial import receptor for the ADP/ATP carrier)
                     (translocase of outermembrane tom70); TIGR00990"
                     /db_xref="CDD:273380"
     Region          326..356
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..389
                     /gene="DNAAF4"
                     /coded_by="XM_041468930.1:42..1211"
                     /db_xref="GeneID:121354367"
ORIGIN      
        1 mpvwlrehsw rqtltavyls lplrgaratp anifcseqyl kvsippflfe avlyapiddt
       61 nstakigngn ifftlykkep alwdsltlan adkeklqylr enavvkaqek akeeteakki
      121 tkqehkkyal eatmkleeae rkriedlkek erqkvakele lwknqqkdgd kyksiqkkee
      181 lhqeieplke kknekmnktr ipnegssktr lkstrghgsc sifsqnlkee qlpapraaat
      241 ikvnftprvf ptalresrva eeeewlrkqa earriinsdl seledlkeee knpdwlkdkg
      301 nkmfamgdyl gavnaynlav rlnnklplly lnraachlkl rnlhkaieds skalelltpp
      361 vpdnenarvk ahvrrgtafc qlelypeel
//
LOCUS       XP_041324865             312 aa            linear   VRT 06-MAY-2021
DEFINITION  pygopus homolog 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324865
VERSION     XP_041324865.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468931.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="pygopus homolog 1"
                     /calculated_mol_wt=33580
     Region          234..290
                     /region_name="PHD_PYGO1"
                     /note="PHD finger found in pygopus homolog 1 (PYGO1);
                     cd15635"
                     /db_xref="CDD:277105"
     Site            order(234,243..245,247,249..251,253,259,272,275..276,278,
                     281)
                     /site_type="other"
                     /note="H3K4me binding site [polypeptide binding]"
                     /db_xref="CDD:277105"
     Site            order(265..268,271,274..275,278,280..284,289)
                     /site_type="other"
                     /note="BCL9 HD1 interface [polypeptide binding]"
                     /db_xref="CDD:277105"
     CDS             1..312
                     /gene="PYGO1"
                     /coded_by="XM_041468931.1:304..1242"
                     /db_xref="GeneID:121354368"
ORIGIN      
        1 mpphmlprvs spyggsyslr nqphplpqnp vgmgfsrphs ftfgphdnpg fgnqppygsg
       61 qinqnvnmsa qhfrpnpgen fghsgqiphp dvptnfgpgn npnfpnsqle snhsfvpppn
      121 tynqtkssaq kqdfsqgask assqntaahq hhhrtedvvs qgnsdlknvt rnnvvnqdns
      181 hsssaentna ghsngtqsks rqprgtaegc nsekssktpl hpsrhghsss epvypcgict
      241 hevnddqdai lceascqkwf hrictgmtes ayglltaeas avwgcdtcma dkdvqlmrtr
      301 etagppalnt eg
//
LOCUS       XP_041324867            1309 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324867
VERSION     XP_041324867.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468933.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1309
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X1"
                     /calculated_mol_wt=147242
     Region          <505..558
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          600..631
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(616,627)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          758..787
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          834..864
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(848,859)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          883..915
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(899,910)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(958,989,1000,1062,1235,1270..1271,1274..1278,1298,
                     1305)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          976..1305
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(1090,1093..1094,1096..1097,1100,1105,1107,
                     1110..1111,1113,1119,1124,1141,1145)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..1309
                     /gene="NEDD4"
                     /coded_by="XM_041468933.1:424..4353"
                     /db_xref="GeneID:121354369"
ORIGIN      
        1 maqrlrlhfa tqrsntdpls etsedfldsn ncvyfkksqt sapsftqvkl iprqaayapv
       61 vqqvinqeks ttisslqikk ssslhislqs rkqsgcsrfg davaagedis figigsegsc
      121 sagavsdhra ndsllssaal grgslssiaa sdsgsfssag sdygscastt sdggsytnsi
      181 isdsgsgtlw tsdstfcssv ahgdssyrst gnkcnpsrsn ssqetlyrsn ttfdqdalsv
      241 rkktkiplrr csslvifprs psstppaspv ssgqlphrgt yqtshkliis pselaqkedq
      301 siskgflsta vnglrlsktv cssgevrdvr plylnaslqd ksqilsgpqq atceevpdgf
      361 scvsvhltqr afasssemvn gscgpelnln sgtkyphlkl erstsaclps ktdseyqini
      421 nelarpnaqm sktphilqrs vslegsrqkv scclsslkyk chsartsqlh iqfkagnegk
      481 atgvrkrygt skremsstlw rpqktrddfl gqvdiplyql ptenpsmerp ytfkdfvlhp
      541 rshksrvkgh lrlkmtylpk nngseeette qaeelepgwi ildqpeaasq pqqqqqespp
      601 lpsgweerqd ilgrtyyvnh efrrtqwkrp taqdsvavad lgsvqleaqh vfthrrqise
      661 dtestdnrds pesweiited eatmyssqnv qiplsqsscd iqshlaeels nrlttsgspa
      721 tgqstahtnh ssrrgslqty rleeqpahpv llptssglpp gweerqdekg rsyyidhnsr
      781 tttwikpvvq iaaeasqasa aqsisvarqp qatssdssqq ssqqqpemeq gflpkgwevr
      841 hapngrpffi dhntktttwe dprlkisahp rrktsldpgd lgplppgwee rthtdgriff
      901 inhntkrtqw edprlqnvai tgpavpysrd ykrkyeffrk klkkqsdipn rfemkihrtt
      961 iledsyrrii avkradflka rlwiefdgek gldyggvare wffllskemf npyyglfeys
     1021 atdnytlqin pnsglcnedh lsyfkfigrv agmavyhgkl ldaffirpfy kmmlqkpitl
     1081 hdmesvdsey ynslrwilen dpteldlrfi vdeelfgqth qhelksggse ivvtnknkrd
     1141 yihlviqwrf vsrvqkqmta fkegffelip qdlikifden elellmcglg dvdvadwklh
     1201 tkykngynin hqviqwfwka vlmmdsekri rllqfvtgts rvpmngfael ygsngpqlft
     1261 veqwgtpekl prahtcfnrl dlppydsfed lwdklllaie ntqgfdgvd
//
LOCUS       XP_041324868             902 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324868
VERSION     XP_041324868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..902
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X2"
                     /calculated_mol_wt=103989
     Region          20..151
                     /region_name="C2_NEDD4_NEDD4L"
                     /note="C2 domain present in the Human neural precursor
                     cell-expressed, developmentally down-regulated 4 (NEDD4)
                     and NEDD4-like (NEDD4L/NEDD42); cd04033"
                     /db_xref="CDD:175999"
     Site            order(41,93,95,100)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175999"
     Region          194..223
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          351..380
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          426..455
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          476..508
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(492,503)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(551,582,593,655,828,863..864,867..871,891,898)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          569..898
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(683,686..687,689..690,693,698,700,703..704,706,712,
                     717,734,738)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..902
                     /gene="NEDD4"
                     /coded_by="XM_041468934.1:44..2752"
                     /db_xref="GeneID:121354369"
ORIGIN      
        1 maaspaevlg lpgeeenari vrvkviagig lakkdilgas dpyvkvtlyd pvngaltsiq
       61 tktirkslnp kwneellfrv npqkhrllfe vfdenrltrd dflgqvdipl yqlptenpsm
      121 erpytfkdfv lhprshksrv kghlrlkmty lpknngseee tteqaeelep gwiildqpea
      181 asqpqqqqqe spplpsgwee rqdilgrtyy vnhefrrtqw krptaqdsva vadlgsvqle
      241 aqhvfthrrq isedtestdn rdspesweii tedeatmyss qnvqiplsqs scdiqshlae
      301 elsnrlttsg spatgqstah tnhssrrgsl qtyrleeqpa hpvllptssg lppgweerqd
      361 ekgrsyyidh nsrtttwikp vvqiaaeasq asaaqsisva rqpqatssds sqqssqqqpe
      421 meqgflpkgw evrhapngrp ffidhntktt twedprlkis ahprrktsld pgdlgplppg
      481 weerthtdgr iffinhntkr tqwedprlqn vaitgpavpy srdykrkyef frkklkkqsd
      541 ipnrfemkih rttiledsyr riiavkradf lkarlwiefd gekgldyggv arewffllsk
      601 emfnpyyglf eysatdnytl qinpnsglcn edhlsyfkfi grvagmavyh gklldaffir
      661 pfykmmlqkp itlhdmesvd seyynslrwi lendpteldl rfivdeelfg qthqhelksg
      721 gseivvtnkn krdyihlviq wrfvsrvqkq mtafkegffe lipqdlikif denelellmc
      781 glgdvdvadw klhtkykngy ninhqviqwf wkavlmmdse krirllqfvt gtsrvpmngf
      841 aelygsngpq lftveqwgtp eklprahtcf nrldlppyds fedlwdklll aientqgfdg
      901 vd
//
LOCUS       XP_041324869             783 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase NEDD4 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324869
VERSION     XP_041324869.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468935.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..783
                     /product="E3 ubiquitin-protein ligase NEDD4 isoform X3"
                     /calculated_mol_wt=90694
     Region          <1..32
                     /region_name="C2"
                     /note="C2 domain; cl14603"
                     /db_xref="CDD:472691"
     Region          75..104
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          232..261
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          307..336
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          357..389
                     /region_name="WW"
                     /note="Domain with 2 conserved Trp (W) residues;
                     smart00456"
                     /db_xref="CDD:197736"
     Site            order(373,384)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Site            order(432,463,474,536,709,744..745,748..752,772,779)
                     /site_type="active"
                     /note="catalytic cleft [active]"
                     /db_xref="CDD:238033"
     Region          450..779
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(564,567..568,570..571,574,579,581,584..585,587,593,
                     598,615,619)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..783
                     /gene="NEDD4"
                     /coded_by="XM_041468935.1:313..2664"
                     /db_xref="GeneID:121354369"
ORIGIN      
        1 merpytfkdf vlhprshksr vkghlrlkmt ylpknngsee etteqaeele pgwiildqpe
       61 aasqpqqqqq espplpsgwe erqdilgrty yvnhefrrtq wkrptaqdsv avadlgsvql
      121 eaqhvfthrr qisedtestd nrdspeswei itedeatmys sqnvqiplsq sscdiqshla
      181 eelsnrltts gspatgqsta htnhssrrgs lqtyrleeqp ahpvllptss glppgweerq
      241 dekgrsyyid hnsrtttwik pvvqiaaeas qasaaqsisv arqpqatssd ssqqssqqqp
      301 emeqgflpkg wevrhapngr pffidhntkt ttwedprlki sahprrktsl dpgdlgplpp
      361 gweerthtdg riffinhntk rtqwedprlq nvaitgpavp ysrdykrkye ffrkklkkqs
      421 dipnrfemki hrttiledsy rriiavkrad flkarlwief dgekgldygg varewfflls
      481 kemfnpyygl feysatdnyt lqinpnsglc nedhlsyfkf igrvagmavy hgklldaffi
      541 rpfykmmlqk pitlhdmesv dseyynslrw ilendpteld lrfivdeelf gqthqhelks
      601 ggseivvtnk nkrdyihlvi qwrfvsrvqk qmtafkegff elipqdliki fdenelellm
      661 cglgdvdvad wklhtkykng yninhqviqw fwkavlmmds ekrirllqfv tgtsrvpmng
      721 faelygsngp qlftveqwgt peklprahtc fnrldlppyd sfedlwdkll laientqgfd
      781 gvd
//
LOCUS       XP_041324870             450 aa            linear   VRT 06-MAY-2021
DEFINITION  sulfide:quinone oxidoreductase, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324870
VERSION     XP_041324870.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468936.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="sulfide:quinone oxidoreductase, mitochondrial"
                     /calculated_mol_wt=49467
     Region          71..354
                     /region_name="FadH2"
                     /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur
                     reductase, or a related oxidoreductase [Lipid transport
                     and metabolism]; COG0446"
                     /db_xref="CDD:440215"
     CDS             1..450
                     /gene="SQOR"
                     /coded_by="XM_041468936.1:379..1731"
                     /db_xref="GeneID:121354370"
ORIGIN      
        1 msaagavfsc sclrsavwll kpgmqkmssf slhtaarcaa kdyyevlvlg ggaggiamsa
       61 rmkrkvgaen vavvepnkth yyqplwtlvg ggakqlaasa rpmasvmpag vewiksqvta
      121 ldpdkncvwl endsrvsyky liialgislh yekikglpeg fnhpkigsny saqtvektwr
      181 alqdfkegna iftfpntpvk cagapqkimy lsdaymrktg krskanimfn tslgvifavk
      241 kyadallevi kdrnltvnyk rnlievradk qeavfenldk pgvtevcqye mlhvtppmgp
      301 pavlinspvs daagwvdldk etlqhkkypn vfgigdctnl ptsktaaava aqsgvldkti
      361 slvmknelpv kkydgytscp lvtaynkvil aefdynaqpl etfpidqske rttmyhmkad
      421 mmpllywnal lkgywggpap vrklmhlglk
//
LOCUS       XP_041324871             450 aa            linear   VRT 06-MAY-2021
DEFINITION  sulfide:quinone oxidoreductase, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324871
VERSION     XP_041324871.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468937.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="sulfide:quinone oxidoreductase, mitochondrial"
                     /calculated_mol_wt=49467
     Region          71..354
                     /region_name="FadH2"
                     /note="NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur
                     reductase, or a related oxidoreductase [Lipid transport
                     and metabolism]; COG0446"
                     /db_xref="CDD:440215"
     CDS             1..450
                     /gene="SQOR"
                     /coded_by="XM_041468937.1:21..1373"
                     /db_xref="GeneID:121354370"
ORIGIN      
        1 msaagavfsc sclrsavwll kpgmqkmssf slhtaarcaa kdyyevlvlg ggaggiamsa
       61 rmkrkvgaen vavvepnkth yyqplwtlvg ggakqlaasa rpmasvmpag vewiksqvta
      121 ldpdkncvwl endsrvsyky liialgislh yekikglpeg fnhpkigsny saqtvektwr
      181 alqdfkegna iftfpntpvk cagapqkimy lsdaymrktg krskanimfn tslgvifavk
      241 kyadallevi kdrnltvnyk rnlievradk qeavfenldk pgvtevcqye mlhvtppmgp
      301 pavlinspvs daagwvdldk etlqhkkypn vfgigdctnl ptsktaaava aqsgvldkti
      361 slvmknelpv kkydgytscp lvtaynkvil aefdynaqpl etfpidqske rttmyhmkad
      421 mmpllywnal lkgywggpap vrklmhlglk
//
LOCUS       XP_041324872             208 aa            linear   VRT 06-MAY-2021
DEFINITION  nicotinamide riboside kinase 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324872
VERSION     XP_041324872.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468938.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="nicotinamide riboside kinase 2-like"
                     /calculated_mol_wt=23941
     Region          4..173
                     /region_name="NRK1"
                     /note="Nicotinamide riboside kinase (NRK) is an enzyme
                     involved in the metabolism of nicotinamide adenine
                     dinucleotide (NAD+). This enzyme catalyzes the
                     phosphorylation of nicotinamide riboside (NR) to form
                     nicotinamide mononucleotide (NMN). It defines the NR...;
                     cd02024"
                     /db_xref="CDD:238982"
     Site            order(9,14..17)
                     /site_type="active"
                     /db_xref="CDD:238982"
     CDS             1..208
                     /gene="LOC121354371"
                     /coded_by="XM_041468938.1:263..889"
                     /db_xref="GeneID:121354371"
ORIGIN      
        1 mniiigiggv tnggkttltr rlmralpncs vvhqddffkp qdeievedgf kqydvisald
       61 meammstina wiknpvkfer shginntmda qiledkeggd etihiliveg fllytyrpli
      121 dvfhhryfls ipyeeckrrr ssrnytvpdp pglfdghvwp myikhrkime elgvdvvhln
      181 gtkskeelfn dvygqiqnki eellntqk
//
LOCUS       XP_041324873            1172 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protogenin [Pyrgilauda ruficollis].
ACCESSION   XP_041324873
VERSION     XP_041324873.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468939.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 3% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1172
                     /product="LOW QUALITY PROTEIN: protogenin"
                     /calculated_mol_wt=128105
     Region          34..126
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          52..56
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          65..69
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          87..91
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          106..111
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          120..123
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          137..219
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          147..152
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          161..165
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          184..188
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          198..203
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          212..215
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..303
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          323..408
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          341..344
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          353..357
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          374..378
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          388..393
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          401..404
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          415..508
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(415,481,496)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(497..498,500..501)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          516..606
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(595..596,598..599)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          615..695
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(615,678,693)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <724..>932
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          817..908
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(899..900,902..903)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1172
                     /gene="PRTG"
                     /coded_by="XM_041468939.1:1..3519"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121354372"
ORIGIN      
        1 mpaasrxmap lrrrpllral llllplpgvw cfselffvke pqdvtvsrkd pvvldcqarg
       61 eapititwlk nggkvsener iytlsngsly isevegkkge lsdegfyqcl alnkhgails
      121 qkshltlati safevqplst evqeggvarf ackitanppa tvtwevnrtt lplvmdrita
      181 lptgvlqiyg veqkdagnyr cvattaanrr ksteavlsvi pasdlkpfhk psiiagpqni
      241 taslhqtvil ecvatgnpkp iiswsrldhk sidvfntrvl gngnlmisdv kvqhagvyvc
      301 ratipgtrnf tvamatltvl appsfvewpe sltrpragta rfacqaegnp apkiswlkng
      361 rrihsngrik mynsklvinq iipeddaiyq cmaensqgsv lsrarltvvm sedrpsapyn
      421 vhaetmsssa illawerply nsdkviaysv hymkaeglnn eeyqvvignd tthyiiddle
      481 pasnytfyiv aymplgasqm sdhvtqhtle dvplrapeis ltsrsptdil iswlpipaky
      541 rrgqvvlyrl sfrlsteskv qvlelpgtaa ehlleglrpd slylvritaa trvgwgeasl
      601 wtshrtpkat svrapkspel rlepmnctti avqwqqdaed taavqgykly ykeegqqeng
      661 pilldasdle ytvsgldprr kyhvrllayn nmeegyqadq tvstpgcvsv rdrmvppppp
      721 phhlyakant sssiylhwgk paftsaqlin ytvrcnpvgl qnaslvlylq tsethmlvqg
      781 lepktmyefa vrlhvdqlss pwspvvyhtt lpeapsgppv gvkvtliedn talvswkppd
      841 gpetvvtryt ilyasrkswi agewqvlhre gamtmallen lvagniylvk iaasnevgeg
      901 pfsnavefav lpketsesnq rpkrldsgds taysdyyhld qksmtgivvg vcialtcili
      961 cililiyrsk arkasapkpv qqstdqlsht sislaspnev ekniegiaen eesllpmivg
     1021 nsfidakggs dliinsygpv tktngkkrwl ffqdakkakt eepqrrfvcl yqpgpavllg
     1081 ragspgspgq ppsfplpfav aadtehsans egshetgdsg rfshesndei hlssvpgatp
     1141 pgssplgsrd sgagspqgae applqslpag pr
//
LOCUS       XP_041324874             273 aa            linear   VRT 06-MAY-2021
DEFINITION  atherin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324874
VERSION     XP_041324874.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468940.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="atherin-like"
                     /calculated_mol_wt=28002
     Region          <36..187
                     /region_name="PRK12323"
                     /note="DNA polymerase III subunit gamma/tau; cl46901"
                     /db_xref="CDD:481241"
     CDS             1..273
                     /gene="LOC121354373"
                     /coded_by="XM_041468940.1:1..822"
                     /db_xref="GeneID:121354373"
ORIGIN      
        1 mrasrrsrrp agapgparpp grqgrhqhlq lrhrssgapa agpargktla pdsrrandal
       61 reqsvlpaap srlgrraprp gaaplrspaq prgapggraa parpalrqlp arhppvvrge
      121 ppcsrltpgr arsprplerr vfngaegasa pgatataags sacgtarqrl pcpprsgpva
      181 pqscarpvpv iaarkagdav ppspprppaa vlltrpeppl srrgipanst plsppprqpr
      241 sppeptahcp pppagegapr pgrggarrga srr
//
LOCUS       XP_041324875             228 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354375 [Pyrgilauda ruficollis].
ACCESSION   XP_041324875
VERSION     XP_041324875.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468941.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="uncharacterized protein LOC121354375"
                     /calculated_mol_wt=23343
     CDS             1..228
                     /gene="LOC121354375"
                     /coded_by="XM_041468941.1:1..687"
                     /db_xref="GeneID:121354375"
ORIGIN      
        1 mlpsvtlkca gatlrskrks pcaaarqgdg sepgsasenq traeplgaav alvttrwepe
       61 glrrqrgdra rgsepgrgap sqtgslcrnr cerprcrpvp tavsggiaae rsalpcpalp
      121 cpalpcarfg paggpgpavr gspvgaakva gtrvydspqd tavqtplygh atrgdragta
      181 salthrcwlr agqgcpplpr ipaasraplr saplrarcrr gsgrspap
//
LOCUS       XP_041324876             340 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: uncharacterized protein LOC121354376
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324876
VERSION     XP_041324876.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468942.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 14% of CDS bases
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="LOW QUALITY PROTEIN: uncharacterized protein
                     LOC121354376"
                     /calculated_mol_wt=36279
     Region          275..324
                     /region_name="TM2"
                     /note="TM2 domain; pfam05154"
                     /db_xref="CDD:428337"
     CDS             1..340
                     /gene="LOC121354376"
                     /coded_by="XM_041468942.1:143..1165"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     deleted 1 base in 1 codon"
                     /db_xref="GeneID:121354376"
ORIGIN      
        1 maafrcagsa glglrcsvsg qkagqaplag scaavlhgsf cacslsrtcv vesvlgllgt
       61 agvagvpkll sflrpcpvaa vrarqqlahr gspepsaggs rtntavpper ylcxpcfcqr
      121 taaiaslnag slmttklsqp qstlakslts tstnapylka lvlslkvlel glrnlymtsq
      181 wmvevrerlq hpartcslpt lgtalklqgi nklvlyiiiy scfsvsdkpl rlllekynif
      241 flviffliil hqcfntfqyl gnrvfpkmly cnwtggykws talalsitlg gfgadrfylg
      301 qwrgglgklf sfgglgiwtl idvlligvgy vgpadgslyi
//
LOCUS       XP_041324877             223 aa            linear   VRT 06-MAY-2021
DEFINITION  telomere repeats-binding bouquet formation protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324877
VERSION     XP_041324877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468943.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..223
                     /product="telomere repeats-binding bouquet formation
                     protein 2"
                     /calculated_mol_wt=25011
     Region          2..208
                     /region_name="TERB2"
                     /note="Telomere-associated protein TERB2; pfam15101"
                     /db_xref="CDD:464503"
     CDS             1..223
                     /gene="TERB2"
                     /coded_by="XM_041468943.1:1..672"
                     /db_xref="GeneID:121354377"
ORIGIN      
        1 mfrghsawfs qsvspgprgl wadaggtlah wldadylfss daahpdtrsi heslsylegr
       61 atvfhscyls vcastrdger psvalgrfvl ppaclheeir rkigrfiwek adaveeqpne
      121 npteepeaar naceeeseee vldlaessee tdsealaqge fpyralqeyp innmvtgyas
      181 ardmkkyege lhdfipgtsg yaaywvqskc siycektkmk rkw
//
LOCUS       XP_041324879            1777 aa            linear   VRT 06-MAY-2021
DEFINITION  ADAMTS-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324879
VERSION     XP_041324879.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468945.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1777
                     /product="ADAMTS-like protein 3"
                     /calculated_mol_wt=197042
     Region          82..128
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          133..231
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          347..405
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          426..483
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          486..538
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          574..629
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          652..707
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          711..763
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          767..818
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          830..884
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          <933..997
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          934..938
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          947..951
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          969..973
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          983..988
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          992..995
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1218..1283
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1218..1222
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1231..1235
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1253..1257
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1267..1272
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1316..1389
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1324..1328
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          1337..1341
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1357..1361
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1371..1376
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1384..1387
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          1420..1488
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          1507..1562
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1566..1623
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1686..1740
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1745..1775
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1777
                     /gene="ADAMTSL3"
                     /coded_by="XM_041468945.1:150..5483"
                     /db_xref="GeneID:121354378"
ORIGIN      
        1 mrmaspkatg lswaitwlaf flyahlqtra eqsqgayflp efalspqgsf ledttgeqfl
       61 tyryddqssr ttrsdedkdd swdawgawsd csrtcgggas yslrrclngr ncegrniryk
      121 tcssndcpsd vgdfraqqcs ayndvkyqgh fyewipvynd ptapcalkcq algknlvvel
      181 apkvldgtrc ntesldmcis gicqavgcdr qlgsnakedn cgicagdgst crlvrgqaka
      241 hvspekreet viavphgsrs vritlkgpah lviesktlqg ekgehsfnap gtfvienttv
      301 efqkstdrei ikiqgplgad fiiktrysgs kesvvqfffy qpishqwrqt effpctvtcg
      361 ggyqlnsaec vdirlkrvvp dhychyhpen kkpkpklkec nmdpcpssdg fkeimpydhf
      421 qplprwehnp wtacsvscgg giqrrsfvcv eetihgeilq veewkcmyap kpkviqtcnl
      481 fdcpkwvame wsqctvtcgr glryrvvlci dhrgqhvggc npqlklhike ecivpvpcyk
      541 pkekspveak lpwfkqahem eetitvseep tfipepwspc satcgsgiqv rdvkcrilla
      601 ftqtevelpe eecederppt ervchqascd sdpvpytpef phaedgtviy dweyigftpc
      661 satclggtqe aiamclhvdt kqgvsealcd nskrpppmtr tcntelcppr wqsgpwsrcs
      721 ascgvgiqsr avscqqpgas apaahqckdp kphslqacnq idcppawhae ewqqcsrtcg
      781 ggiqtrrvsc kqlltdgsfl khpdntcqep klpttkacak vdcppqlvfg ewskcsvscg
      841 vgiqrrklac qnltakgqyv tlngsmcsal spsllvrscq mnacnkikpk lpakfsahgp
      901 qivsihrvyi qtrpekrinf tigsrayllp ktsvvikcpv rrfqkslirw ekdgqhlqns
      961 krlgitksgs lkihcleaad igvyrciags ahetfvlkli gtdnrliepl ppqkqpsqtr
     1021 dadlneansl gakwhkmskm wqmwskknel ylgdrqvndq pflrslgsfg snsaedfssr
     1081 efrnkrleaa vlqgaysmdt aqfeelmsnm sqlietgevs ddlasqliyq liaelsrhpq
     1141 paaekwkgaq dekvssklps kspneserfs tktvdklvfd qkvpvimrqk eipqvsfnkt
     1201 vtvrigntvf ltknthavnl lcetagmsev kytwtkdgkt lkasakvild pagkvqirnp
     1261 aqkelgtygc lvvndsgfdm etslllraev pvilssvlnm tnleassfst vvggtivars
     1321 ganiliecpv kgvpkpnvtw lkkkdvlqin sslvlngslf lrnvsyrdag tytcratnal
     1381 gkaeaasvlh iteqrltenn apllkgsrrk rvlmasgigt nvsvapgdpl rigcpvlpsh
     1441 rntvqwlfgd spveevqtle yrtlvggril evntnsgqfa gqfqcrtsas aklmsvwvnv
     1501 kkegytweya ewspcsatcg hsgtrsrslq ctnaekqkvn esqcrelqkp givyqpcnre
     1561 dcpprwvagp wsecsascgs gfrhrqlsch qavadgstla llpgactard rpaarkpclg
     1621 hpcplgpaqa stqcsgrcvg rpagsqhpef icqlqngssv pnsscderks pparrncsse
     1681 gcdvywrpgp wrpcsvgcgt gfqsrrvscv hrqsnkpmae qfcrgrkrpv twqhcnvtsc
     1741 gkgeckdrth yctfvkqlkl clidtykqrc cqscqem
//
LOCUS       XP_041324880             578 aa            linear   VRT 06-MAY-2021
DEFINITION  lamin-L(III)-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324880
VERSION     XP_041324880.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468946.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..578
                     /product="lamin-L(III)-like isoform X1"
                     /calculated_mol_wt=66033
     Region          33..389
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     Region          438..544
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     CDS             1..578
                     /gene="LOC121354379"
                     /coded_by="XM_041468946.1:36..1772"
                     /db_xref="GeneID:121354379"
ORIGIN      
        1 matalpptpa ggsrsasraa esslsparls rlqekeelrq lndrlaayie rvraleadks
       61 vlqqrlsehq agsdrelgcl rlryeaelad arralddiai eratlqvelg kigeehrqlh
      121 vrnskkesdl nlaqarvrdl daqlnakead latalnenrt lenelrelkd qvlslnlsle
      181 dtkkhlhsem lrrvdlenhm ktlqeemtfq krlhedelke tkrvhesria evesgrqref
      241 esklsdalqg lrkqheeqiq gykeemertf sakvenaqlt avrnsefasa areelmetqk
      301 rvdtlisqvn qyqsqnvale srikelqnll dydrdlhrrr maekeeemaq aqkqaqaqle
      361 eyehlldvkl aldleinayr kmlegeeqrl klspspsshs tatqaasqgr rylhgkkrki
      421 ketkkrehsa alktiqhvsa tgnisieeid adgkfvrlkn hsdedqslhg wvlrrrigsv
      481 advnykfpsr ftlqagqevt iwgaaagvsp gpsdlvwrsq kswgtgdnig vtlitdngee
      541 laerkivlvp reeeseqddd yeeiqtkrrr kkkcclvs
//
LOCUS       XP_041324881             536 aa            linear   VRT 06-MAY-2021
DEFINITION  lamin-L(III)-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324881
VERSION     XP_041324881.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468947.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..536
                     /product="lamin-L(III)-like isoform X2"
                     /calculated_mol_wt=61267
     Region          33..347
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     Region          396..502
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     CDS             1..536
                     /gene="LOC121354379"
                     /coded_by="XM_041468947.1:36..1646"
                     /db_xref="GeneID:121354379"
ORIGIN      
        1 matalpptpa ggsrsasraa esslsparls rlqekeelrq lndrlaayie rvraleadks
       61 vlqqrlsehq agsdrelgcl rlryeaelad arralddiai eratlqvelg kigeehrqlh
      121 vrnskkesdl nlaqarvrdl daqlnakead latalnenrt lenelrelkd qvlslnlsle
      181 dtkkhlhsem lrrvdlenhm ktlqeemtfq krlhedelke tkrvhesria evesgrqref
      241 esklsdalqg lrkqheeqiq gykeemertf saknvalesr ikelqnlldy drdlhrrrma
      301 ekeeemaqaq kqaqaqleey ehlldvklal dleinayrkm legeeqrlkl spspsshsta
      361 tqaasqgrry lhgkkrkike tkkrehsaal ktiqhvsatg nisieeidad gkfvrlknhs
      421 dedqslhgwv lrrrigsvad vnykfpsrft lqagqevtiw gaaagvspgp sdlvwrsqks
      481 wgtgdnigvt litdngeela erkivlvpre eeseqdddye eiqtkrrrkk kcclvs
//
LOCUS       XP_041324882             599 aa            linear   VRT 06-MAY-2021
DEFINITION  lamin-L(III)-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324882
VERSION     XP_041324882.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468948.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..599
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..599
                     /product="lamin-L(III)-like isoform X3"
                     /calculated_mol_wt=68388
     Region          33..389
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     Region          438..544
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     CDS             1..599
                     /gene="LOC121354379"
                     /coded_by="XM_041468948.1:36..1835"
                     /db_xref="GeneID:121354379"
ORIGIN      
        1 matalpptpa ggsrsasraa esslsparls rlqekeelrq lndrlaayie rvraleadks
       61 vlqqrlsehq agsdrelgcl rlryeaelad arralddiai eratlqvelg kigeehrqlh
      121 vrnskkesdl nlaqarvrdl daqlnakead latalnenrt lenelrelkd qvlslnlsle
      181 dtkkhlhsem lrrvdlenhm ktlqeemtfq krlhedelke tkrvhesria evesgrqref
      241 esklsdalqg lrkqheeqiq gykeemertf sakvenaqlt avrnsefasa areelmetqk
      301 rvdtlisqvn qyqsqnvale srikelqnll dydrdlhrrr maekeeemaq aqkqaqaqle
      361 eyehlldvkl aldleinayr kmlegeeqrl klspspsshs tatqaasqgr rylhgkkrki
      421 ketkkrehsa alktiqhvsa tgnisieeid adgkfvrlkn hsdedqslhg wvlrrrigsv
      481 advnykfpsr ftlqagqevt iwgaaagvsp gpsdlvwrsq kswgtgdnig vtlitdngee
      541 laerkivlvp reeeseqddd yeeiqqfynt vvchlckmki pavwscnvdn nlkthlspr
//
LOCUS       XP_041324883             353 aa            linear   VRT 06-MAY-2021
DEFINITION  endophilin-A3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324883
VERSION     XP_041324883.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468949.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="endophilin-A3"
                     /calculated_mol_wt=39922
     Region          25..247
                     /region_name="BAR_Endophilin_A3"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of
                     Endophilin-A3; cd07615"
                     /db_xref="CDD:153299"
     Site            order(38..39,42..43,45..46,49..50,53,57,60..61,89..90,
                     92..93,96..97,100,103..104,108..110,113..114,208..209,
                     211..213,215..216,219,222..223,225..227,229..230,233..234,
                     236..237,240,244)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153299"
     Site            order(45,53,65,67,152,156,159,164..165,173..174,177,184)
                     /site_type="other"
                     /note="putative membrane interaction site"
                     /db_xref="CDD:153299"
     Region          294..348
                     /region_name="SH3_Endophilin_A"
                     /note="Src homology 3 domain of Endophilin-A; cd11803"
                     /db_xref="CDD:212737"
     Site            order(300,302,305,309,327..328,341,343..344)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212737"
     CDS             1..353
                     /gene="SH3GL3"
                     /coded_by="XM_041468949.1:83..1144"
                     /db_xref="GeneID:121354380"
ORIGIN      
        1 msvaglkkqf hkasqlfsek isgaegtkld eefqemerki dvtnkavtel lsksteylqp
       61 npayraklgm lntmskirgq vkttgypqte gllgdcmiry grelgdesmf glalldages
      121 mkqmaevkds ldinvkqnfi dplqllqdkd lkeighhlkk legrrldydy kkkrfgkipd
      181 eevkqavekf eeskelaers mfnflendve qvsqlavfve aaldyhkqst eiledlqskl
      241 qnrinvassr pkrefkpkpv itttleigdn qqhngiayss sikssgssvh mdqpccqaly
      301 dfepenegel gfkegdiitl tnqidenwye gmlngesgff pinyvevivp lpq
//
LOCUS       XP_041324885             732 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324885
VERSION     XP_041324885.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468951.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="transcription factor 12 isoform X1"
                     /calculated_mol_wt=78408
     Region          621..705
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(629,633,635..637,639,644,665..666)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(642..643,646..647,649..650,653,657,667,670,674,677,
                     680..685)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..732
                     /gene="TCF12"
                     /coded_by="XM_041468951.1:178..2376"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mnsqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mdertgatsw
       61 gtsgqpspsy essrengslh gkssdlstdi eklksqegfa dsphysdhln dsrlgphegl
      121 sptpfmnsnl mgktsdrgpf plygrdtglp gcqssllrsd mglgsagqls ssakpgtpyy
      181 pfsgtnqrrr plhdssaldp lqtkkvrkvp pglpssvyap spssddfnre spsypspkpp
      241 ssmfastffm qdgthnssdl wsssngmsqp gyggmlggss shmsqsgsyg slhthdrlsy
      301 pphsvsptdi naslppmssf hrgstssspy vaashtppvn gsdnilgnrg ngagssqtgd
      361 algkalasiy spdhtsssfp snpstpvgsp spltgasqws rsggqapssp syenslhslk
      421 nrveqqlheh lqdamsflkd vceqsrmedr ldrlddaihv lrnhavgpst slsaahgdih
      481 sllgpshngp igslnsnyga sslvtanrqa smvgthreeg vslnsnhsvl pstvsaqste
      541 lnhktqdsyr alsgglqsqs vaigpteiks ehkekdenih eppssddmks ddessqkdik
      601 vssrgrtsst nededlnpeq kierekerrm annarerlrv rdineafkel grmcqlhlks
      661 ekpqtkllil hqavavilsl eqqvrernln pkaaclkrre eekvsavsae pptahpgshp
      721 glsettnpmg hm
//
LOCUS       XP_041324886             732 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324886
VERSION     XP_041324886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="transcription factor 12 isoform X1"
                     /calculated_mol_wt=78408
     Region          621..705
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(629,633,635..637,639,644,665..666)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(642..643,646..647,649..650,653,657,667,670,674,677,
                     680..685)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..732
                     /gene="TCF12"
                     /coded_by="XM_041468952.1:48..2246"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mnsqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mdertgatsw
       61 gtsgqpspsy essrengslh gkssdlstdi eklksqegfa dsphysdhln dsrlgphegl
      121 sptpfmnsnl mgktsdrgpf plygrdtglp gcqssllrsd mglgsagqls ssakpgtpyy
      181 pfsgtnqrrr plhdssaldp lqtkkvrkvp pglpssvyap spssddfnre spsypspkpp
      241 ssmfastffm qdgthnssdl wsssngmsqp gyggmlggss shmsqsgsyg slhthdrlsy
      301 pphsvsptdi naslppmssf hrgstssspy vaashtppvn gsdnilgnrg ngagssqtgd
      361 algkalasiy spdhtsssfp snpstpvgsp spltgasqws rsggqapssp syenslhslk
      421 nrveqqlheh lqdamsflkd vceqsrmedr ldrlddaihv lrnhavgpst slsaahgdih
      481 sllgpshngp igslnsnyga sslvtanrqa smvgthreeg vslnsnhsvl pstvsaqste
      541 lnhktqdsyr alsgglqsqs vaigpteiks ehkekdenih eppssddmks ddessqkdik
      601 vssrgrtsst nededlnpeq kierekerrm annarerlrv rdineafkel grmcqlhlks
      661 ekpqtkllil hqavavilsl eqqvrernln pkaaclkrre eekvsavsae pptahpgshp
      721 glsettnpmg hm
//
LOCUS       XP_041324887             731 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324887
VERSION     XP_041324887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..731
                     /product="transcription factor 12 isoform X2"
                     /calculated_mol_wt=78280
     Region          620..704
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(628,632,634..636,638,643,664..665)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(641..642,645..646,648..649,652,656,666,669,673,676,
                     679..684)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..731
                     /gene="TCF12"
                     /coded_by="XM_041468953.1:178..2373"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mnsqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mdertgatsw
       61 gtsgqpspsy essrengslh gkssdlstdi eklksqegfa dsphysdhln dsrlgphegl
      121 sptpfmnsnl mgktsdrgpf plygrdtglp gcqssllrsd mglgsagqls ssakpgtpyy
      181 pfsgtnqrrr plhdssaldp lqtkkvrkvp pglpssvyap spssddfnre spsypspkpp
      241 ssmfastffm qdgthnssdl wsssngmsqp gyggmlggss shmsqsgsyg slhthdrlsy
      301 pphsvsptdi naslppmssf hrgstssspy vaashtppvn gsdnilgnrg ngagssqtgd
      361 algkalasiy spdhtsssfp snpstpvgsp spltgasqws rsggqapssp syenslhslk
      421 nrveqqlheh lqdamsflkd vcesrmedrl drlddaihvl rnhavgpsts lsaahgdihs
      481 llgpshngpi gslnsnygas slvtanrqas mvgthreegv slnsnhsvlp stvsaqstel
      541 nhktqdsyra lsgglqsqsv aigpteikse hkekdenihe ppssddmksd dessqkdikv
      601 ssrgrtsstn ededlnpeqk ierekerrma nnarerlrvr dineafkelg rmcqlhlkse
      661 kpqtkllilh qavavilsle qqvrernlnp kaaclkrree ekvsavsaep ptahpgshpg
      721 lsettnpmgh m
//
LOCUS       XP_041324888             731 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324888
VERSION     XP_041324888.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468954.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..731
                     /product="transcription factor 12 isoform X3"
                     /calculated_mol_wt=78321
     Region          620..704
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(628,632,634..636,638,643,664..665)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(641..642,645..646,648..649,652,656,666,669,673,676,
                     679..684)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..731
                     /gene="TCF12"
                     /coded_by="XM_041468954.1:178..2373"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mnsqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mdertgatsw
       61 gtsgqpspsy essrengslh gkssdlstdi eklksqegfa dsphysdhln dsrlgphegl
      121 sptpfmnsnl mgktsdrgpf plygrdtglp gcqssllrsd mglgsagqls ssakpgtpyy
      181 pfsgtnqrrr plhdssaldp lqtkkvrkvp pglpssvyap spssddfnre spsypspkpp
      241 ssmfastffm qdgthnssdl wsssngmsqp gyggmlggss shmsqsgsyg slhthdrlsy
      301 pphsvsptdi naslppmssf hrgstssspy vaashtppvn gsdnilgnrg ngagssqtgd
      361 algkalasiy spdhtsssfp snpstpvgsp spltgasqws rsggqapssp syenslhslk
      421 nrveqqlheh lqdamsflkd vceqsrmedr ldrlddaihv lrnhavgpst slsaahgdih
      481 sllgpshngp igslnsnyga sslvtanrqa smvgthreeg vslnsnhsvl pstvsaqste
      541 lnhktqdsyr alsgglqsqs vaigpteiks ehkekdenih eppssddmks ddessqkdik
      601 vssrgrtstn ededlnpeqk ierekerrma nnarerlrvr dineafkelg rmcqlhlkse
      661 kpqtkllilh qavavilsle qqvrernlnp kaaclkrree ekvsavsaep ptahpgshpg
      721 lsettnpmgh m
//
LOCUS       XP_041324889             708 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324889
VERSION     XP_041324889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..708
                     /product="transcription factor 12 isoform X4"
                     /calculated_mol_wt=75528
     Region          597..681
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(605,609,611..613,615,620,641..642)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(618..619,622..623,625..626,629,633,643,646,650,653,
                     656..661)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..708
                     /gene="TCF12"
                     /coded_by="XM_041468955.1:178..2304"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mnsqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mdertgatsw
       61 gtsgqpspsy essrengslh gkssdlstdi eklksqegfa dsphysdhln dsrlgphegl
      121 sptpfmnsnl mgktsdrgpf plygrdtglp gcqssllrsd mglgsagqls ssakpgtpyy
      181 pfsgtnqrrr plhdssaldp lqtkkvrkvp pglpssvyap spssddfnre spsypspkpp
      241 ssmfastffm qdgthnssdl wsssngmsqp gyggmlggss shmsqsgsyg slhthdrlsy
      301 pphsvsptdi naslppmssf hrgstssspy vaashtppvn gsdnilgnrg ngagssqtgd
      361 algkalasiy spdhtsssfp snpstpvgsp spltgasqws rsggqapssp syenslhslq
      421 srmedrldrl ddaihvlrnh avgpstslsa ahgdihsllg pshngpigsl nsnygasslv
      481 tanrqasmvg threegvsln snhsvlpstv saqstelnhk tqdsyralsg glqsqsvaig
      541 pteiksehke kdenihepps sddmksddes sqkdikvssr grtsstnede dlnpeqkier
      601 ekerrmanna rerlrvrdin eafkelgrmc qlhlksekpq tkllilhqav avilsleqqv
      661 rernlnpkaa clkrreeekv savsaeppta hpgshpglse ttnpmghm
//
LOCUS       XP_041324890             707 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324890
VERSION     XP_041324890.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468956.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="transcription factor 12 isoform X5"
                     /calculated_mol_wt=75441
     Region          596..680
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(604,608,610..612,614,619,640..641)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(617..618,621..622,624..625,628,632,642,645,649,652,
                     655..660)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..707
                     /gene="TCF12"
                     /coded_by="XM_041468956.1:178..2301"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mnsqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mdertgatsw
       61 gtsgqpspsy essrengslh gkssdlstdi eklksqegfa dsphysdhln dsrlgphegl
      121 sptpfmnsnl mgktsdrgpf plygrdtglp gcqssllrsd mglgsagqls ssakpgtpyy
      181 pfsgtnqrrr plhdssaldp lqtkkvrkvp pglpssvyap spssddfnre spsypspkpp
      241 ssmfastffm qdgthnssdl wsssngmsqp gyggmlggss shmsqsgsyg slhthdrlsy
      301 pphsvsptdi naslppmssf hrgstssspy vaashtppvn gsdnilgnrg ngagssqtgd
      361 algkalasiy spdhtsssfp snpstpvgsp spltgasqws rsggqapssp syenslhslq
      421 srmedrldrl ddaihvlrnh avgpstslsa ahgdihsllg pshngpigsl nsnygasslv
      481 tanrqasmvg threegvsln snhsvlpstv saqstelnhk tqdsyralsg glqsqsvaig
      541 pteiksehke kdenihepps sddmksddes sqkdikvssr grtstneded lnpeqkiere
      601 kerrmannar erlrvrdine afkelgrmcq lhlksekpqt kllilhqava vilsleqqvr
      661 ernlnpkaac lkrreeekvs avsaepptah pgshpglset tnpmghm
//
LOCUS       XP_041324891             707 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324891
VERSION     XP_041324891.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468957.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="transcription factor 12 isoform X6"
                     /calculated_mol_wt=75400
     Region          596..680
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(604,608,610..612,614,619,640..641)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(617..618,621..622,624..625,628,632,642,645,649,652,
                     655..660)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..707
                     /gene="TCF12"
                     /coded_by="XM_041468957.1:178..2301"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mnsqqqrmaa igtdkelsdl ldfsamfspp vnsgktrptt lgssqfsgsg mdertgatsw
       61 gtsgqpspsy essrengslh gkssdlstdi eklksqegfa dsphysdhln dsrlgphegl
      121 sptpfmnsnl mgktsdrgpf plygrdtglp gcqssllrsd mglgsagqls ssakpgtpyy
      181 pfsgtnqrrr plhdssaldp lqtkkvrkvp pglpssvyap spssddfnre spsypspkpp
      241 ssmfastffm qdgthnssdl wsssngmsqp gyggmlggss shmsqsgsyg slhthdrlsy
      301 pphsvsptdi naslppmssf hrgstssspy vaashtppvn gsdnilgnrg ngagssqtgd
      361 algkalasiy spdhtsssfp snpstpvgsp spltgasqws rsggqapssp syenslhsls
      421 rmedrldrld daihvlrnha vgpstslsaa hgdihsllgp shngpigsln snygasslvt
      481 anrqasmvgt hreegvslns nhsvlpstvs aqstelnhkt qdsyralsgg lqsqsvaigp
      541 teiksehkek deniheppss ddmksddess qkdikvssrg rtsstneded lnpeqkiere
      601 kerrmannar erlrvrdine afkelgrmcq lhlksekpqt kllilhqava vilsleqqvr
      661 ernlnpkaac lkrreeekvs avsaepptah pgshpglset tnpmghm
//
LOCUS       XP_041324892             490 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324892
VERSION     XP_041324892.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468958.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="transcription factor 12 isoform X7"
                     /calculated_mol_wt=52635
     Region          379..463
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(387,391,393..395,397,402,423..424)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(400..401,404..405,407..408,411,415,425,428,432,435,
                     438..443)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..490
                     /gene="TCF12"
                     /coded_by="XM_041468958.1:98..1570"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mfastffmqd gthnssdlws ssngmsqpgy ggmlggsssh msqsgsygsl hthdrlsypp
       61 hsvsptdina slppmssfhr gstssspyva ashtppvngs dnilgnrgng agssqtgdal
      121 gkalasiysp dhtsssfpsn pstpvgspsp ltgasqwsrs ggqapsspsy enslhslknr
      181 veqqlhehlq damsflkdvc eqsrmedrld rlddaihvlr nhavgpstsl saahgdihsl
      241 lgpshngpig slnsnygass lvtanrqasm vgthreegvs lnsnhsvlps tvsaqsteln
      301 hktqdsyral sgglqsqsva igpteikseh kekdenihep pssddmksdd essqkdikvs
      361 srgrtsstne dedlnpeqki erekerrman narerlrvrd ineafkelgr mcqlhlksek
      421 pqtkllilhq avavilsleq qvrernlnpk aaclkrreee kvsavsaepp tahpgshpgl
      481 settnpmghm
//
LOCUS       XP_041324893             557 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324893
VERSION     XP_041324893.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468959.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..557
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..557
                     /product="transcription factor 12 isoform X8"
                     /calculated_mol_wt=59642
     Region          446..530
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(454,458,460..462,464,469,490..491)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(467..468,471..472,474..475,478,482,492,495,499,502,
                     505..510)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..557
                     /gene="TCF12"
                     /coded_by="XM_041468959.1:209..1882"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mpwgagggal sparasramy caypvpgvgs sslmyyyngk tvyapspssd dfnrespsyp
       61 spkppssmfa stffmqdgth nssdlwsssn gmsqpgyggm lggssshmsq sgsygslhth
      121 drlsypphsv sptdinaslp pmssfhrgst ssspyvaash tppvngsdni lgnrgngags
      181 sqtgdalgka lasiyspdht sssfpsnpst pvgspspltg asqwsrsggq apsspsyens
      241 lhslknrveq qlhehlqdam sflkdvceqs rmedrldrld daihvlrnha vgpstslsaa
      301 hgdihsllgp shngpigsln snygasslvt anrqasmvgt hreegvslns nhsvlpstvs
      361 aqstelnhkt qdsyralsgg lqsqsvaigp teiksehkek deniheppss ddmksddess
      421 qkdikvssrg rtsstneded lnpeqkiere kerrmannar erlrvrdine afkelgrmcq
      481 lhlksekpqt kllilhqava vilsleqqvr ernlnpkaac lkrreeekvs avsaepptah
      541 pgshpglset tnpmghm
//
LOCUS       XP_041324894             533 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041324894
VERSION     XP_041324894.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468960.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..533
                     /product="transcription factor 12 isoform X9"
                     /calculated_mol_wt=56761
     Region          422..506
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(430,434,436..438,440,445,466..467)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(443..444,447..448,450..451,454,458,468,471,475,478,
                     481..486)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..533
                     /gene="TCF12"
                     /coded_by="XM_041468960.1:204..1805"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mpwgagggal sparasramy caypvpgvgs sslmyyyngk tvyapspssd dfnrespsyp
       61 spkppssmfa stffmqdgth nssdlwsssn gmsqpgyggm lggssshmsq sgsygslhth
      121 drlsypphsv sptdinaslp pmssfhrgst ssspyvaash tppvngsdni lgnrgngags
      181 sqtgdalgka lasiyspdht sssfpsnpst pvgspspltg asqwsrsggq apsspsyens
      241 lhslqsrmed rldrlddaih vlrnhavgps tslsaahgdi hsllgpshng pigslnsnyg
      301 asslvtanrq asmvgthree gvslnsnhsv lpstvsaqst elnhktqdsy ralsgglqsq
      361 svaigpteik sehkekdeni heppssddmk sddessqkdi kvssrgrtss tnededlnpe
      421 qkierekerr mannarerlr vrdineafke lgrmcqlhlk sekpqtklli lhqavavils
      481 leqqvrernl npkaaclkrr eeekvsavsa epptahpgsh pglsettnpm ghm
//
LOCUS       XP_041324895             532 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041324895
VERSION     XP_041324895.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468961.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..532
                     /product="transcription factor 12 isoform X10"
                     /calculated_mol_wt=56674
     Region          421..505
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(429,433,435..437,439,444,465..466)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(442..443,446..447,449..450,453,457,467,470,474,477,
                     480..485)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..532
                     /gene="TCF12"
                     /coded_by="XM_041468961.1:208..1806"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mpwgagggal sparasramy caypvpgvgs sslmyyyngk tvyapspssd dfnrespsyp
       61 spkppssmfa stffmqdgth nssdlwsssn gmsqpgyggm lggssshmsq sgsygslhth
      121 drlsypphsv sptdinaslp pmssfhrgst ssspyvaash tppvngsdni lgnrgngags
      181 sqtgdalgka lasiyspdht sssfpsnpst pvgspspltg asqwsrsggq apsspsyens
      241 lhslqsrmed rldrlddaih vlrnhavgps tslsaahgdi hsllgpshng pigslnsnyg
      301 asslvtanrq asmvgthree gvslnsnhsv lpstvsaqst elnhktqdsy ralsgglqsq
      361 svaigpteik sehkekdeni heppssddmk sddessqkdi kvssrgrtst nededlnpeq
      421 kierekerrm annarerlrv rdineafkel grmcqlhlks ekpqtkllil hqavavilsl
      481 eqqvrernln pkaaclkrre eekvsavsae pptahpgshp glsettnpmg hm
//
LOCUS       XP_041324896             490 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324896
VERSION     XP_041324896.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468962.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="transcription factor 12 isoform X7"
                     /calculated_mol_wt=52635
     Region          379..463
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(387,391,393..395,397,402,423..424)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(400..401,404..405,407..408,411,415,425,428,432,435,
                     438..443)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..490
                     /gene="TCF12"
                     /coded_by="XM_041468962.1:219..1691"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mfastffmqd gthnssdlws ssngmsqpgy ggmlggsssh msqsgsygsl hthdrlsypp
       61 hsvsptdina slppmssfhr gstssspyva ashtppvngs dnilgnrgng agssqtgdal
      121 gkalasiysp dhtsssfpsn pstpvgspsp ltgasqwsrs ggqapsspsy enslhslknr
      181 veqqlhehlq damsflkdvc eqsrmedrld rlddaihvlr nhavgpstsl saahgdihsl
      241 lgpshngpig slnsnygass lvtanrqasm vgthreegvs lnsnhsvlps tvsaqsteln
      301 hktqdsyral sgglqsqsva igpteikseh kekdenihep pssddmksdd essqkdikvs
      361 srgrtsstne dedlnpeqki erekerrman narerlrvrd ineafkelgr mcqlhlksek
      421 pqtkllilhq avavilsleq qvrernlnpk aaclkrreee kvsavsaepp tahpgshpgl
      481 settnpmghm
//
LOCUS       XP_041324897             490 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324897
VERSION     XP_041324897.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468963.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="transcription factor 12 isoform X7"
                     /calculated_mol_wt=52635
     Region          379..463
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(387,391,393..395,397,402,423..424)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(400..401,404..405,407..408,411,415,425,428,432,435,
                     438..443)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..490
                     /gene="TCF12"
                     /coded_by="XM_041468963.1:270..1742"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mfastffmqd gthnssdlws ssngmsqpgy ggmlggsssh msqsgsygsl hthdrlsypp
       61 hsvsptdina slppmssfhr gstssspyva ashtppvngs dnilgnrgng agssqtgdal
      121 gkalasiysp dhtsssfpsn pstpvgspsp ltgasqwsrs ggqapsspsy enslhslknr
      181 veqqlhehlq damsflkdvc eqsrmedrld rlddaihvlr nhavgpstsl saahgdihsl
      241 lgpshngpig slnsnygass lvtanrqasm vgthreegvs lnsnhsvlps tvsaqsteln
      301 hktqdsyral sgglqsqsva igpteikseh kekdenihep pssddmksdd essqkdikvs
      361 srgrtsstne dedlnpeqki erekerrman narerlrvrd ineafkelgr mcqlhlksek
      421 pqtkllilhq avavilsleq qvrernlnpk aaclkrreee kvsavsaepp tahpgshpgl
      481 settnpmghm
//
LOCUS       XP_041324898             490 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324898
VERSION     XP_041324898.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468964.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="transcription factor 12 isoform X7"
                     /calculated_mol_wt=52635
     Region          379..463
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(387,391,393..395,397,402,423..424)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(400..401,404..405,407..408,411,415,425,428,432,435,
                     438..443)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..490
                     /gene="TCF12"
                     /coded_by="XM_041468964.1:292..1764"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mfastffmqd gthnssdlws ssngmsqpgy ggmlggsssh msqsgsygsl hthdrlsypp
       61 hsvsptdina slppmssfhr gstssspyva ashtppvngs dnilgnrgng agssqtgdal
      121 gkalasiysp dhtsssfpsn pstpvgspsp ltgasqwsrs ggqapsspsy enslhslknr
      181 veqqlhehlq damsflkdvc eqsrmedrld rlddaihvlr nhavgpstsl saahgdihsl
      241 lgpshngpig slnsnygass lvtanrqasm vgthreegvs lnsnhsvlps tvsaqsteln
      301 hktqdsyral sgglqsqsva igpteikseh kekdenihep pssddmksdd essqkdikvs
      361 srgrtsstne dedlnpeqki erekerrman narerlrvrd ineafkelgr mcqlhlksek
      421 pqtkllilhq avavilsleq qvrernlnpk aaclkrreee kvsavsaepp tahpgshpgl
      481 settnpmghm
//
LOCUS       XP_041324899             490 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 12 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324899
VERSION     XP_041324899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="transcription factor 12 isoform X7"
                     /calculated_mol_wt=52635
     Region          379..463
                     /region_name="bHLH_E-protein_TCF4_E2-2"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 4 (TCF-4) and similar proteins;
                     cd18945"
                     /db_xref="CDD:381515"
     Site            order(387,391,393..395,397,402,423..424)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381515"
     Site            order(400..401,404..405,407..408,411,415,425,428,432,435,
                     438..443)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381515"
     CDS             1..490
                     /gene="TCF12"
                     /coded_by="XM_041468965.1:98..1570"
                     /db_xref="GeneID:121354381"
ORIGIN      
        1 mfastffmqd gthnssdlws ssngmsqpgy ggmlggsssh msqsgsygsl hthdrlsypp
       61 hsvsptdina slppmssfhr gstssspyva ashtppvngs dnilgnrgng agssqtgdal
      121 gkalasiysp dhtsssfpsn pstpvgspsp ltgasqwsrs ggqapsspsy enslhslknr
      181 veqqlhehlq damsflkdvc eqsrmedrld rlddaihvlr nhavgpstsl saahgdihsl
      241 lgpshngpig slnsnygass lvtanrqasm vgthreegvs lnsnhsvlps tvsaqsteln
      301 hktqdsyral sgglqsqsva igpteikseh kekdenihep pssddmksdd essqkdikvs
      361 srgrtsstne dedlnpeqki erekerrman narerlrvrd ineafkelgr mcqlhlksek
      421 pqtkllilhq avavilsleq qvrernlnpk aaclkrreee kvsavsaepp tahpgshpgl
      481 settnpmghm
//
LOCUS       XP_041324901             186 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase CLA4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324901
VERSION     XP_041324901.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468967.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..186
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..186
                     /product="serine/threonine-protein kinase CLA4-like"
                     /calculated_mol_wt=20035
     Region          <11..127
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     CDS             1..186
                     /gene="LOC121354383"
                     /coded_by="XM_041468967.1:7..567"
                     /db_xref="GeneID:121354383"
ORIGIN      
        1 mrvrrrgreg papslvpaga agepprpras tsfgaarsfm stepqhhvhg sgsvslraer
       61 rrlnpcraap grggrgstdt pgsrpgsrla pdaapghpsr wgeagpvgpl retrtpreqt
      121 pphrsptqpn rqqtstcsta gnarapkdii altlnshtlq yvlilsiyqy kvlllkikwh
      181 inyinl
//
LOCUS       XP_041324902            1468 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324902
VERSION     XP_041324902.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468968.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1468
                     /product="DNA-binding protein RFX7 isoform X1"
                     /calculated_mol_wt=157384
     Region          39..96
                     /region_name="RFX5_N"
                     /note="RFX5 N-terminal domain; pfam18326"
                     /db_xref="CDD:375753"
     Region          101..179
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     Region          <262..493
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1468
                     /gene="RFX7"
                     /coded_by="XM_041468968.1:209..4615"
                     /db_xref="GeneID:121354384"
ORIGIN      
        1 maeeqqpegg qpprrlagtp apggalpalv pglqggeasa lqhkirssic ktvqskvdci
       61 lqevekftdl eklylylqlp sgpnngdksd qlsmsssraq qmhafswirn tleehpetsl
      121 pkqevydeyk sycdnlgyhp lsaadfgkim knvfpnmkar rlgtrgksky cysglrkkaf
      181 vhmptlpnld fhktgdgldg aepsgqlqsa deevvsaacr lvcewaqkvl sqpfdtvlel
      241 arflvkshyi gtksmaaltv magapagikg ipqpsafipt aesnsfqpqv ktlpspvdak
      301 qqlqrkiqkk qqeqklqspl pgespvkkte gaatngvtsi sngspailsp ppigivvaav
      361 pspipvprtr qlvtspspmg ssdskvlpln vqvvtqhmqs vkqppktpqn vpaspvgdrs
      421 arhrypqilp kpantsalti rspttvlfts spiktvvpap hvnslnvvkm taislapsss
      481 svpvkqtpsv stsagaveeg rtgpqikngs vvslqspgsk pstaaatpav kiktepeall
      541 densaqgqes sdmsksikat pdlppaqlin fevaalkvst ddvmelkpgk gcdqeaeeag
      601 tkyktqsdei tpvssagnnq stlkltvasq nlsstsinsp psgesmikdk tctksprkrq
      661 pstlqdsqlp pvkkplveqf aagnavegqk annvkkalkv gslansdnta tlaqvpikvp
      721 vtvpvpptaa anlatdlsls tnlntcdpal eqqlasassp dikvklegnl fiiendsksd
      781 gsfnpntwhh itktsdfasv ncdqqqdisv mtiaghsgss dlqesawepv hcegmqqdvy
      841 sqqlqsqiqd sldqiqaqss nqlplqselk efehtvpqsn enffsfdddl tqdsiveelv
      901 lmeeqmsmnn shpysgclgm alqsqaaaqg apvsshpsst hfyhsihnns tpihtptptp
      961 tptptptptp tptsemiags qnmsrespcs rlaqttpvds algssrhtpi gtphsncsss
     1021 vppspvecrn pfaftpisss mayhdasiis sspvkpmqrp mathpdktkl ewmnngysgv
     1081 gnssvanhgi ltsyqelved rfrkphafav pgqsyqsqpr hhdthfgrvt pvspvqhqaa
     1141 pvssttkqeg favpapldnk atgsslnnsl rcrsvspavh rqrnlsgstv ypvsniprsn
     1201 ltpfgspvtp evhnvfanih adtsanniaq rsqsvpltvm mqtafpslqk qtntkkitsv
     1261 llnkldsdsd davrglgmnn mpsnytarmn ltqiletsta fpsanpqsmi nsstsvyefq
     1321 tpsyltknss tdqisfssgd nqaqsdigeq qldfsstvkd llgedslptn qqlvnqvasd
     1381 lnnvasvfps dirlsselsg sindlntldt nllfdpgrqq gqdddatlee lkndplfqqi
     1441 cnesinsmta sgfewmeskd hpavemlg
//
LOCUS       XP_041324903            1375 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA-binding protein RFX7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324903
VERSION     XP_041324903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1375
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1375
                     /product="DNA-binding protein RFX7 isoform X2"
                     /calculated_mol_wt=147504
     Region          8..86
                     /region_name="RFX_DNA_binding"
                     /note="RFX DNA-binding domain; pfam02257"
                     /db_xref="CDD:460512"
     Region          <169..400
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..1375
                     /gene="RFX7"
                     /coded_by="XM_041468969.1:127..4254"
                     /db_xref="GeneID:121354384"
ORIGIN      
        1 msssraqqmh afswirntle ehpetslpkq evydeyksyc dnlgyhplsa adfgkimknv
       61 fpnmkarrlg trgkskycys glrkkafvhm ptlpnldfhk tgdgldgaep sgqlqsadee
      121 vvsaacrlvc ewaqkvlsqp fdtvlelarf lvkshyigtk smaaltvmag apagikgipq
      181 psafiptaes nsfqpqvktl pspvdakqql qrkiqkkqqe qklqsplpge spvkktegaa
      241 tngvtsisng spailspppi givvaavpsp ipvprtrqlv tspspmgssd skvlplnvqv
      301 vtqhmqsvkq ppktpqnvpa spvgdrsarh rypqilpkpa ntsaltirsp ttvlftsspi
      361 ktvvpaphvn slnvvkmtai slapssssvp vkqtpsvsts agaveegrtg pqikngsvvs
      421 lqspgskpst aaatpavkik tepeallden saqgqessdm sksikatpdl ppaqlinfev
      481 aalkvstddv melkpgkgcd qeaeeagtky ktqsdeitpv ssagnnqstl kltvasqnls
      541 stsinsppsg esmikdktct ksprkrqpst lqdsqlppvk kplveqfaag navegqkann
      601 vkkalkvgsl ansdntatla qvpikvpvtv pvpptaaanl atdlslstnl ntcdpaleqq
      661 lasasspdik vklegnlfii endsksdgsf npntwhhitk tsdfasvncd qqqdisvmti
      721 aghsgssdlq esawepvhce gmqqdvysqq lqsqiqdsld qiqaqssnql plqselkefe
      781 htvpqsnenf fsfdddltqd siveelvlme eqmsmnnshp ysgclgmalq sqaaaqgapv
      841 sshpssthfy hsihnnstpi htptptptpt ptptptptpt semiagsqnm srespcsrla
      901 qttpvdsalg ssrhtpigtp hsncsssvpp spvecrnpfa ftpisssmay hdasiisssp
      961 vkpmqrpmat hpdktklewm nngysgvgns svanhgilts yqelvedrfr kphafavpgq
     1021 syqsqprhhd thfgrvtpvs pvqhqaapvs sttkqegfav papldnkatg sslnnslrcr
     1081 svspavhrqr nlsgstvypv sniprsnltp fgspvtpevh nvfanihadt sanniaqrsq
     1141 svpltvmmqt afpslqkqtn tkkitsvlln kldsdsddav rglgmnnmps nytarmnltq
     1201 iletstafps anpqsminss tsvyefqtps yltknsstdq isfssgdnqa qsdigeqqld
     1261 fsstvkdllg edslptnqql vnqvasdlnn vasvfpsdir lsselsgsin dlntldtnll
     1321 fdpgrqqgqd ddatleelkn dplfqqicne sinsmtasgf ewmeskdhpa vemlg
//
LOCUS       XP_041324904             395 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324904
VERSION     XP_041324904.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468970.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42365
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <341..>390
                     /region_name="CREPT"
                     /note="Cell-cycle alteration and expression-elevated
                     protein in tumour; pfam16566"
                     /db_xref="CDD:465181"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_041468970.1:204..1391"
                     /db_xref="GeneID:121354385"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehhhqevv
      121 ellikygadv haqskfckta ldiavdngne diaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvssa ntsnrtdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppvkrq cieivenrve saeieeretl qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamnrlqt nkeav
//
LOCUS       XP_041324905             395 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324905
VERSION     XP_041324905.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468971.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42365
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <341..>390
                     /region_name="CREPT"
                     /note="Cell-cycle alteration and expression-elevated
                     protein in tumour; pfam16566"
                     /db_xref="CDD:465181"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_041468971.1:267..1454"
                     /db_xref="GeneID:121354385"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehhhqevv
      121 ellikygadv haqskfckta ldiavdngne diaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvssa ntsnrtdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppvkrq cieivenrve saeieeretl qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamnrlqt nkeav
//
LOCUS       XP_041324906             395 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324906
VERSION     XP_041324906.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468972.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42365
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <341..>390
                     /region_name="CREPT"
                     /note="Cell-cycle alteration and expression-elevated
                     protein in tumour; pfam16566"
                     /db_xref="CDD:465181"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_041468972.1:236..1423"
                     /db_xref="GeneID:121354385"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehhhqevv
      121 ellikygadv haqskfckta ldiavdngne diaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvssa ntsnrtdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppvkrq cieivenrve saeieeretl qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamnrlqt nkeav
//
LOCUS       XP_041324907             395 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324907
VERSION     XP_041324907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468973.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42365
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <341..>390
                     /region_name="CREPT"
                     /note="Cell-cycle alteration and expression-elevated
                     protein in tumour; pfam16566"
                     /db_xref="CDD:465181"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_041468973.1:133..1320"
                     /db_xref="GeneID:121354385"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehhhqevv
      121 ellikygadv haqskfckta ldiavdngne diaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvssa ntsnrtdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppvkrq cieivenrve saeieeretl qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamnrlqt nkeav
//
LOCUS       XP_041324908             395 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein subunit beta-1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324908
VERSION     XP_041324908.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468974.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..395
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..395
                     /product="GA-binding protein subunit beta-1 isoform X1"
                     /calculated_mol_wt=42365
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <341..>390
                     /region_name="CREPT"
                     /note="Cell-cycle alteration and expression-elevated
                     protein in tumour; pfam16566"
                     /db_xref="CDD:465181"
     CDS             1..395
                     /gene="GABPB1"
                     /coded_by="XM_041468974.1:645..1832"
                     /db_xref="GeneID:121354385"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehhhqevv
      121 ellikygadv haqskfckta ldiavdngne diaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltglvssa ntsnrtdetg vsavqfgnss tsvlatlaal aeasaplsns
      241 setpvvatee vvtaesvdga iqqvvssggq qvitivtdgi qlgnlhsipt sgigqpiivt
      301 mpdgqqvltv patdiaeetv iseeppvkrq cieivenrve saeieeretl qkqldeanre
      361 aqkyrqqllk keqeaeayrq kleamnrlqt nkeav
//
LOCUS       XP_041324910             383 aa            linear   VRT 06-MAY-2021
DEFINITION  GA-binding protein subunit beta-1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324910
VERSION     XP_041324910.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468976.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..383
                     /product="GA-binding protein subunit beta-1 isoform X2"
                     /calculated_mol_wt=41176
     Region          <10..179
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          10..35
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          38..68
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(39,43..44,47..49,51..52,56,59,68,70,72,76..77,
                     80..82,84..85,89,92,101,103,105,109..110,113..115,
                     117..118,122,125)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          70..101
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          103..133
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <329..>378
                     /region_name="CREPT"
                     /note="Cell-cycle alteration and expression-elevated
                     protein in tumour; pfam16566"
                     /db_xref="CDD:465181"
     CDS             1..383
                     /gene="GABPB1"
                     /coded_by="XM_041468976.1:199..1350"
                     /db_xref="GeneID:121354385"
ORIGIN      
        1 mslvdlgkkl leaaragqdd evrilmanga pfttdwlgts plhlaaqygh ysttevllra
       61 gvsrdartkv drtplhmaas eghasivevl lkhgadvnak dmlkmtalhw atehhhqevv
      121 ellikygadv haqskfckta ldiavdngne diaeilqiam qnqintnpes pdtvtihaat
      181 pqfiigpggv vnltdetgvs avqfgnssts vlatlaalae asaplsnsse tpvvateevv
      241 taesvdgaiq qvvssggqqv itivtdgiql gnlhsiptsg igqpiivtmp dgqqvltvpa
      301 tdiaeetvis eeppvkrqci eivenrvesa eieeretlqk qldeanreaq kyrqqllkke
      361 qeaeayrqkl eamnrlqtnk eav
//
LOCUS       XP_041324911             203 aa            linear   VRT 06-MAY-2021
DEFINITION  ESX-1 secretion-associated protein EspI-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324911
VERSION     XP_041324911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468977.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..203
                     /product="ESX-1 secretion-associated protein EspI-like"
                     /calculated_mol_wt=21441
     CDS             1..203
                     /gene="LOC121354386"
                     /coded_by="XM_041468977.1:1..612"
                     /db_xref="GeneID:121354386"
ORIGIN      
        1 mlpsyallra qsksyrlrvr gtaegkplps rpsrlspghl wrqararspa asgaraaapp
       61 appgpgtvpt rptprcpaek pagraeprsa pqlpgpspga srspaprgpp rpppgpsapp
      121 apparrgprk agrppalpdr kswlgwalrr eprrrvpgev elfftseein fhirgylgea
      181 dslphghnlg pghckvtpep ppg
//
LOCUS       XP_041324912             518 aa            linear   VRT 06-MAY-2021
DEFINITION  integrator complex subunit 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041324912
VERSION     XP_041324912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468978.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..518
                     /product="integrator complex subunit 14"
                     /calculated_mol_wt=57307
     Region          3..114
                     /region_name="VWA_2"
                     /note="von Willebrand factor type A domain; pfam13519"
                     /db_xref="CDD:463909"
     Region          209..356
                     /region_name="IntS14_b-barrel"
                     /note="Integrator complex subunit 14, beta-barrel domain;
                     pfam19435"
                     /db_xref="CDD:466081"
     Region          405..512
                     /region_name="IntS14_C"
                     /note="Integrator complex subunit 14, alpha-helical
                     domain; pfam20504"
                     /db_xref="CDD:466653"
     CDS             1..518
                     /gene="INTS14"
                     /coded_by="XM_041468978.1:358..1914"
                     /db_xref="GeneID:121354387"
ORIGIN      
        1 mptvvvmdvs lsmtrpvsve gseeyqrkhl aahgltmlfe hmatnyklef talvvfsslw
       61 elmvpftrdy ntlqealsnm ddydktcles allgvcnivq qewgaaipcq vvlvtdgclg
      121 igrgslrhsl athsqrsdsn rfplpfpfps klyvmcmanl eelqstdsld clerlidlnn
      181 gegqiftidg plclknvqsm fgklidlayt pfhavlkcgh ltsdvqvfpr pepfiideei
      241 dpipkaintd leivgfvdia dissppvlsr hlvlpialnr egdevgpgit ddtedensan
      301 qiagkipnfc vllhgslkve gmvalvqlgp ewygmlysqa dskkksnlmm slfepgpepl
      361 pwlgkmaqlg pisdakenpy geddnkspfp lqpknkrsya qnvtvwikps glqtdvqkil
      421 rnarklpekt qtfykelnrl rkaalafgfl ellkgvadml erectllpdt ahpdaafqlt
      481 haaqqlkvas tgaseyaayd hniaplqtdf ssssterm
//
LOCUS       XP_041324913             362 aa            linear   VRT 06-MAY-2021
DEFINITION  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324913
VERSION     XP_041324913.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468979.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="very-long-chain (3R)-3-hydroxyacyl-CoA
                     dehydratase 3"
                     /calculated_mol_wt=42746
     Region          8..115
                     /region_name="p23_hB-ind1_like"
                     /note="p23_like domain found in human (h) butyrate-induced
                     transcript 1 (B-ind1) and similar proteins. hB-ind1
                     participates in signaling by the small GTPase Rac1. It
                     binds to Rac1 and enhances different Rac1 effects
                     including activation of nuclear factor (NF)...; cd06465"
                     /db_xref="CDD:107222"
     Site            order(14,26..27,72,77,91,102,104..105,107..108,110)
                     /site_type="active"
                     /note="Hsp90 binding site [active]"
                     /db_xref="CDD:107222"
     Region          195..356
                     /region_name="PTPLA"
                     /note="Protein tyrosine phosphatase-like protein, PTPLA;
                     pfam04387"
                     /db_xref="CDD:461286"
     CDS             1..362
                     /gene="HACD3"
                     /coded_by="XM_041468979.1:30..1118"
                     /db_xref="GeneID:121354388"
ORIGIN      
        1 magpslrphv hwaqrhrelf lrvdlsdvrn pdititdnvl hfraqghgak gdniyefeie
       61 flepvepkpv crmtqrqlni tvqkkesnww erltkqekrp lflapdfdrw ldesdaemel
      121 kekeeekink mkiesrvpkd pfkhlkkgyl imynlvqflg fswifvnmtv rlfilgkdsf
      181 ydtfhtisdm myfcqtlalm eimnsliglv rsplipsvlq ifgrnfvlfv ilgsleemqs
      241 kpvvffifyf wsiielfryp yymlscigie wkpltwlryt vwiplyplgg laeavcivqs
      301 ipifsetgkf slglpnplnv tiqfpfvlqi ylialflgvf vnfrhlykqr kqhlgpkkrk
      361 mk
//
LOCUS       XP_041324914            1743 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Vc [Pyrgilauda ruficollis].
ACCESSION   XP_041324914
VERSION     XP_041324914.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468980.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1743
                     /product="unconventional myosin-Vc"
                     /calculated_mol_wt=203256
     Region          12..1321
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          81..741
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(109..117,161..168,207..217,435..440)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            109..117
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            161..168
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            207..217
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            435..443
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(464..475,478..487)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            674..684
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(695..705,726..741)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          1370..1737
                     /region_name="Myo5c_CBD"
                     /note="Cargo binding domain of myosin 5C; cd15476"
                     /db_xref="CDD:271260"
     CDS             1..1743
                     /gene="MYO5C"
                     /coded_by="XM_041468980.1:1..5232"
                     /db_xref="GeneID:121354389"
ORIGIN      
        1 malaelytqy nrvwipdnee vwqsaeitkn ykagdnflhv qledgtelsy pvdpaalppl
       61 rnpdilvgen dltalsylhe pavlhnlkir fveskliyty sgiilvainp ykqlpiygda
      121 iihaysgqnm gdmdphifav aeeaykqmar nnknqsiivs gesgagktvs arytmryfat
      181 vsksssnahv edkvlasnpi teavgnaktt rndnssrfgk yteisfdrny qiiganmrty
      241 lleksrvvfq senernyhif yqlcasamqp eykhlklgsa eefnytrmgg stviegvddr
      301 anmvetqktf allglkedfq mdvfkmlaai lhlgnvevaa vgderssism edkhlsifce
      361 lldlncdkmt rwlchrkivt tsetvvkpmt raqavnarda lakkiyshlf dfiverinqa
      421 lqfpgkqhtf igvldiygfe tfdvnsfeqf cinyaneklq qqfnlhvfkl eqeeymkedi
      481 pwtlidfydn qpvidlieak mgilelldee cllphgkden wlqklynnfv nknalfekpr
      541 msntsfiiqh fadkveykce gfleknrdtv hevlieilke skfhlcanff qdspvsvspf
      601 ssainiksar pvlkspnkql rttvgskfrn slsllmvtln attphyvrci kpndeklpfe
      661 fdskrvaqql racgvletir isaqsypsrw tyieffsrys ilmtqqelsi ndkkqickiv
      721 lqrliqdhnq fqfgrtkiff ragqvaylek lrsdklrqac illqtrvrgw lqrrrflavr
      781 raaltvqqyf rgqrtvrqai tarnlketwa aiiiqkycrg ylvrrlcqli hvaavtiqay
      841 trgflarkky rkmreeqkav vlqkyarawl arrrfqnirr fvlniqlsyr vqqlqrkiee
      901 qsrenhglle rltnlasahv ndvdtiqkle sevekltaqk rtyeekgkky kedseqkilk
      961 lenqnkelqe qketleiklq ekteemkekm ddltqqlfnd vqkeenqrmi leknfqnqkq
     1021 dyekeiellk geikilkeek tqlqqqiqqe iiiqdglkme vgqltkqaqk ipelqkeiel
     1081 lqtqkldvek qahsqkrelr ekmsevtkql lesydfedvr srlstedleh lnedgelwfa
     1141 yeglkkatrv leshfqsqke iyekeiegln fkvehlnqdi nhlqklfree ndindgirle
     1201 vsrltsenlv ipdlkqqvae lenqkldlen rlqeqtiklk gkmeemsnrl hyelerdrtq
     1261 rrtteaqnev dikekeslkd tiqgieglsn glmqdevqde lqskikqvtt rlavenrdle
     1321 ekldmkdrii kkledqiktl tktiekckil lslvptvpke yigmmeykke deeriiqnli
     1381 ldlkprgvvv nmipglpahi lfmcvryady lndadmlksf mnvtidgikq vvkehsedfe
     1441 mlsfwlsnty yflnclkqys geeefmkcnt prqnknclkh fdlseyrqil sdlaiqiyhq
     1501 fiivmenniq hmivpgmley eslqgisglk ptgfrkrsss iddtdtytmt silqqlsyfy
     1561 stmcqnglds ellkqavkql ffligavtln slflrkdmcs crkgmqircn isyleewlkd
     1621 knlqssnake tleplsqaaw llqvkkitdd dakeicehct slstvqivki lnsytpiddf
     1681 ekrvtpsfvr kvqamlnnre dvpqlmldtk hlfqvtfpft psphaleliq vpssfklgfl
     1741 trv
//
LOCUS       XP_041324915             761 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 10
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324915
VERSION     XP_041324915.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468981.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..761
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 10 isoform X1"
                     /calculated_mol_wt=85842
     Region          58..168
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          233..472
                     /region_name="ZnMc_TACE_like"
                     /note="Zinc-dependent metalloprotease; TACE_like
                     subfamily. TACE, the tumor-necrosis factor-alpha
                     converting enzyme, releases soluble TNF-alpha from
                     transmembrane pro-TNF-alpha; cd04270"
                     /db_xref="CDD:239798"
     Site            order(396..397,400,406)
                     /site_type="active"
                     /db_xref="CDD:239798"
     Region          479..557
                     /region_name="Disintegrin"
                     /note="pfam00200"
                     /db_xref="CDD:459709"
     CDS             1..761
                     /gene="ADAM10"
                     /coded_by="XM_041468981.1:28..2313"
                     /db_xref="GeneID:121354390"
ORIGIN      
        1 mtspcsagtl qrfttcralg evgdlkqnsk sqygnplnky irhyeglsyd vdllhqkhqr
       61 akravsheeq flrldfhahg rqfnlrmkrd tslfsddfkv eisnqvidyd tshiytghiy
      121 geqgsfthgs vidgkfegfi qthsgtfyie paeryikdrn lpfhsviyhe ddikyphkyg
      181 pqggcadhsv fermqkyqmt gieepttekp veepkkddpq llrkkratqa ekntcqlyiq
      241 tdhlfykhyg treaviaqis shvkaidtiy qstdfsgirn isfmvkriri nttvdekdss
      301 npfrfpnigv ekflelnseq nhddyclayv ftdrdfddgv lglawvgaps gssggiceks
      361 klysdgkkks lntgiitvqn ygshvppkvs hitfahevgh nfgsphdsgm ectpgesknl
      421 gqkengnyim yaratsgdkl nnnkfsicsi rnisqvlekk rnncfvesgq picgnglveq
      481 geqcdcgysd qckddccyda nqpedkkckl rpgkncspsq gpcctaqcdf ksrtdkcrnd
      541 sdcakegmcn gvsalcpise pkenftvcnr ntqvcikgqc agsicekhgl eectcassdg
      601 kddrelchvc cmrkmdpatc astgssrwqe yfhletitlq pgspcndfkg ycdvfmrcrl
      661 vdadgplarl kkaifnpely eniaewivay wwavllmgia limlmagfik icsvhtpssn
      721 pklpphkplp gtlkrrrppq ttqppqrqrp resyqmghmr r
//
LOCUS       XP_041324916             749 aa            linear   VRT 06-MAY-2021
DEFINITION  disintegrin and metalloproteinase domain-containing protein 10
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324916
VERSION     XP_041324916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468982.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..749
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..749
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 10 isoform X2"
                     /calculated_mol_wt=84292
     Region          46..156
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          221..460
                     /region_name="ZnMc_TACE_like"
                     /note="Zinc-dependent metalloprotease; TACE_like
                     subfamily. TACE, the tumor-necrosis factor-alpha
                     converting enzyme, releases soluble TNF-alpha from
                     transmembrane pro-TNF-alpha; cd04270"
                     /db_xref="CDD:239798"
     Site            order(384..385,388,394)
                     /site_type="active"
                     /db_xref="CDD:239798"
     Region          467..545
                     /region_name="Disintegrin"
                     /note="pfam00200"
                     /db_xref="CDD:459709"
     CDS             1..749
                     /gene="ADAM10"
                     /coded_by="XM_041468982.1:264..2513"
                     /db_xref="GeneID:121354390"
ORIGIN      
        1 mdlagtiill cscaagaggq ygnplnkyir hyeglsydvd llhqkhqrak ravsheeqfl
       61 rldfhahgrq fnlrmkrdts lfsddfkvei snqvidydts hiytghiyge qgsfthgsvi
      121 dgkfegfiqt hsgtfyiepa eryikdrnlp fhsviyhedd ikyphkygpq ggcadhsvfe
      181 rmqkyqmtgi eepttekpve epkkddpqll rkkratqaek ntcqlyiqtd hlfykhygtr
      241 eaviaqissh vkaidtiyqs tdfsgirnis fmvkrirint tvdekdssnp frfpnigvek
      301 flelnseqnh ddyclayvft drdfddgvlg lawvgapsgs sggicekskl ysdgkkksln
      361 tgiitvqnyg shvppkvshi tfahevghnf gsphdsgmec tpgesknlgq kengnyimya
      421 ratsgdklnn nkfsicsirn isqvlekkrn ncfvesgqpi cgnglveqge qcdcgysdqc
      481 kddccydanq pedkkcklrp gkncspsqgp cctaqcdfks rtdkcrndsd cakegmcngv
      541 salcpisepk enftvcnrnt qvcikgqcag sicekhglee ctcassdgkd drelchvccm
      601 rkmdpatcas tgssrwqeyf hletitlqpg spcndfkgyc dvfmrcrlvd adgplarlkk
      661 aifnpelyen iaewivayww avllmgiali mlmagfikic svhtpssnpk lpphkplpgt
      721 lkrrrppqtt qppqrqrpre syqmghmrr
//
LOCUS       XP_041324918             281 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member A
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324918
VERSION     XP_041324918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468984.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member A isoform X1"
                     /calculated_mol_wt=32097
     Region          19..53
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <71..146
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          90..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..281
                     /gene="ANP32A"
                     /coded_by="XM_041468984.1:155..1000"
                     /db_xref="GeneID:121354391"
ORIGIN      
        1 mdmkkrihle lrnrtpsdvk elvldncrsy egkiegltde feeleflsti nvgltsvanl
       61 pklnklkkle lsdnrisggl evlaekcpnl thlnlsgnki kdlgtieplk klenlksldl
      121 fncevtnlnd yrenvfkllp qltyldgydr ddkeapdsda egyvegldde eededalslv
      181 kdrddkeapd sdaegyvegl ddeeededee eydddaqvve deedeeeeee geeedvsgee
      241 eedeegyndg evddeedeee peeergqkrk repedegded d
//
LOCUS       XP_041324919             277 aa            linear   VRT 06-MAY-2021
DEFINITION  acidic leucine-rich nuclear phosphoprotein 32 family member A
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324919
VERSION     XP_041324919.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468985.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="acidic leucine-rich nuclear phosphoprotein 32
                     family member A isoform X2"
                     /calculated_mol_wt=31713
     Region          19..53
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          <71..146
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          90..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          115..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..277
                     /gene="ANP32A"
                     /coded_by="XM_041468985.1:155..988"
                     /db_xref="GeneID:121354391"
ORIGIN      
        1 mdmkkrihle lrnrtpsdvk elvldncrsy egkiegltde feeleflsti nvgltsvanl
       61 pklnklkkle lsdnrisggl evlaekcpnl thlnlsgnki kdlgtieplk klenlksldl
      121 fncevtnlnd yrenvfkllp qltyldgydr ddkeapdsda egyvegldde eededvkdrd
      181 dkeapdsdae gyveglddee ededeeeydd daqvvedeed eeeeeegeee dvsgeeeede
      241 egyndgevdd eedeeepeee rgqkrkrepe degdedd
//
LOCUS       XP_041324920            3069 aa            linear   VRT 06-MAY-2021
DEFINITION  dmX-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324920
VERSION     XP_041324920.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468986.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3069
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3069
                     /product="dmX-like protein 2 isoform X1"
                     /calculated_mol_wt=341823
     Region          61..102
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..178
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          181..235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..275
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1177..1909
                     /region_name="Rav1p_C"
                     /note="RAVE protein 1 C terminal; pfam12234"
                     /db_xref="CDD:432413"
     Region          2720..>3051
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          2767..2801
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2802..2837
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2843..2883
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2888..2930
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2937..2972
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2978..3021
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3069
                     /gene="DMXL2"
                     /coded_by="XM_041468986.1:51..9260"
                     /db_xref="GeneID:121354393"
ORIGIN      
        1 mhlhqvltga vnpgdngysv gsvqdtpfta ygsgcdivil andfecvqii pgakhgniqv
       61 scvecsqrqg riaasygnav cifeplgins hkrncqlkcq wlktgqffls smtynlawdp
      121 qgnrlltatd flqlwappsd dileededdd gssqikddkv lpvlndwkcv wqcktatsvh
      181 lmswspdgey fatagkddcl lkvwypmtgw kssllpqene ekkkssedvq fsfvylahpr
      241 avtgfswrni skymprglvc nvlltscldg icrlwaetll pedtllgeqi cetttssiss
      301 tisqsgkqkd tiqhaletih hlknmrkgqr rssvlvthtd vlpdqqgthe vqrhishqan
      361 alghfhiaas inpntdipsv lagtafnide gsggfvvhwl nnkefhftss ievfmqhlrq
      421 iseqqleqdf dieaeeeeet eekekglrmk ldhdlsidre setgtgtgss ehedgeregs
      481 pktsllagpr lplptvlldr kidllltewn rnpdmlftih pvdgtflvwh vkyldeytpg
      541 ifrqvqvsfs sripvafpsg dasslsknim myacpvfvkd sssaaqqktm dfpnstlank
      601 gpsfaqdsan vniispvvmm iskhidgsln qwavtfadks afttvltvsh kfrycghrfh
      661 lndlachsvl pllltsshhn alltpesdts wdsdrisrmm dpikhkrgss kqqlknaatr
      721 tfhdpnaiys elilwrvdpi gplsytggvs elarinslht safsnvawlp tlipsyclgt
      781 ycnsasacfv asdgknlrly qavvdarkll delsdpessk ligevfnivs qqstarpgci
      841 ieldaitnkc gsntqllhvf qedfilgykp hkedaegket eiffqpsqgy rpppfsekfy
      901 lvviekdssg csvlqmwhlh lksvqaclak pteassadnk lsvpeqktvd sspdvspgis
      961 piprsssian lqtasklils srlvysqpld lpvgvevvra tpsaghlsss siypvclapy
     1021 livtscsdnr vrfwrctvet dlnskteeke tyhwrkwplm ndegednsst vsivgrpvav
     1081 scsytgrlav aykqpiqhng fvskefsmhv cilecestgg sewvleqtih lddlvkvgsv
     1141 ldsrvsvdsn lfvysksdaf lnkdkylvps ikhlvhldwv skedgshilt vgvganifmy
     1201 grlsgivtdq tsskegvavi tlplggsikq gvkskwvllr sidlvssvdg tpslpvslsw
     1261 vrdgilvvgm dcemhvyaqw khavkfvnge sdvfpsedst tqdpfktsav mkktsvidga
     1321 givddvfgtp tviqdaglfe aahvlsptlp qyhptqllel mdlgkvrrak ailshlvkci
     1381 agevaivkdt eagegtgpkr hlsrtisvsg stakdtitag kdgtrdytei dsipplplya
     1441 llaadqdaty vaeetskipq gsedhakrkt edqysdlfqi qpvttedfid fepekresks
     1501 kvinlsqygp tyfgrehasv lsshlmhssl pgltrleqmf lvaladtvam tsteldenrd
     1561 knysgrdtld ecglryllam rlhtclltsl pplyrvqllh qglstchfaw afhseaeeel
     1621 inmipaiqkg dpqwselram gigwwvrnin tlrrciekva kasfqrnnda ldaalfylam
     1681 kkkavvwglf rsqhdekmta ffshnfnedr wrkaalknaf allgkqrfeq saaffllags
     1741 lkdaievcle kmediqlamv iarlyesefe tsvtytsily ekilgcqkdg tgfsctklhs
     1801 dpflrsiayw imkdytrald tlleqtpkdd denpvivksc npvvfsfyny lrthpllirr
     1861 yfsspegtla tlglkteksf vdkinlierk lffttanahf kvgcpvlale vlskipkirk
     1921 kstvagekds sspsiqtdvs dskalqdgag ssdidwskpi stsfalgstv essaqfdwsq
     1981 pavkfddepl tldwgedkng sdeedkdvgi mmkksdskse dertsdtsva qtphgevsea
     2041 gdtevdviae qlkfraclki lmtelrtlat gyevdggklr fqlynwleke iaamheicnh
     2101 dtgdkdyckt ytkvngdlld pedimdkpdi gsyerhqier rrlqakreha errkwwlqkn
     2161 qallrvflsy cslhgaqggg lasvrmelkf llqesqqett vkqlqsplpl pttlpllsas
     2221 iastktvian pvlylnnhih dilytivqmk spphpniedv kvytlhslaa slsasiyqal
     2281 cdshsyssqt eanqftgmvy qglllsdrrr lrtesieeha tpnsspaqwp gvsslinlls
     2341 saqdedqpkl nillceavva vylsllihal atnscnelfr laahplnsrm waavfgggvk
     2401 llvkprrqse nipapplpse emdkhrrrfn mrmlvpgrpv kdsnvpppvp aerpsykekf
     2461 ippelsmwdy fmakpflpls dsgviydsde sihsdeeedd aflsdvqiqe htdansyswa
     2521 llhltmvklv lhniknffpi agleftdlpv tsplgiavik nlehweqilq drmdqfegpp
     2581 pnyintypsd lgvgagpail rnkamiepen tpfkskdysa lpakrlwhfl vkqellqetf
     2641 iryiftkkrk qsesvedrve qvkqncvaed hknkveadlg ypggkakiih kesdmimafa
     2701 vnkansneiv lasthdvqel disallaaqs fiwigeeydr eskssddvdf rgstttlaps
     2761 sapsfgvsqi qpspsmpwlg tgqtstgagv likrnlnnvk rmashpvhqy yltgaqdgsv
     2821 rmfewtrpqq lvcfqqagna rvtrmyfnaq gnkcgvadge gflsiwqvnq ttsnpkpyls
     2881 wqchskttsd fafitssslv atsgqsndnr nvclwdtlvs ssnslihaft chdhgatvlq
     2941 yapkhqllis ggrkgyicif dirqrqilft fqahesavka laldpsedyf vtgsaegnmk
     3001 vwrltgynli hsfknehakq slfrnigagv tqietvqgnr ifscgadgtl kmrvlpnafn
     3061 vpsgifdil
//
LOCUS       XP_041324921            3065 aa            linear   VRT 06-MAY-2021
DEFINITION  dmX-like protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324921
VERSION     XP_041324921.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468987.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3065
                     /product="dmX-like protein 2 isoform X2"
                     /calculated_mol_wt=341275
     Region          61..102
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          109..178
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          181..235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..271
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1173..1905
                     /region_name="Rav1p_C"
                     /note="RAVE protein 1 C terminal; pfam12234"
                     /db_xref="CDD:432413"
     Region          2716..>3047
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          2763..2797
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2798..2833
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2839..2879
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2884..2926
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2933..2968
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2974..3017
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..3065
                     /gene="DMXL2"
                     /coded_by="XM_041468987.1:51..9248"
                     /db_xref="GeneID:121354393"
ORIGIN      
        1 mhlhqvltga vnpgdngysv gsvqdtpfta ygsgcdivil andfecvqii pgakhgniqv
       61 scvecsqrqg riaasygnav cifeplgins hkrncqlkcq wlktgqffls smtynlawdp
      121 qgnrlltatd flqlwappsd dileededdd gssqikddkv lpvlndwkcv wqcktatsvh
      181 lmswspdgey fatagkddcl lkvwypmtgw kssllpqene ekkkssedvq fsfvylahpr
      241 avtgfswrni skglvcnvll tscldgicrl waetllpedt llgeqicett tssisstisq
      301 sgkqkdtiqh aletihhlkn mrkgqrrssv lvthtdvlpd qqgthevqrh ishqanalgh
      361 fhiaasinpn tdipsvlagt afnidegsgg fvvhwlnnke fhftssievf mqhlrqiseq
      421 qleqdfdiea eeeeeteeke kglrmkldhd lsidresetg tgtgssehed geregspkts
      481 llagprlplp tvlldrkidl lltewnrnpd mlftihpvdg tflvwhvkyl deytpgifrq
      541 vqvsfssrip vafpsgdass lsknimmyac pvfvkdsssa aqqktmdfpn stlankgpsf
      601 aqdsanvnii spvvmmiskh idgslnqwav tfadksaftt vltvshkfry cghrfhlndl
      661 achsvlplll tsshhnallt pesdtswdsd risrmmdpik hkrgsskqql knaatrtfhd
      721 pnaiyselil wrvdpigpls ytggvselar inslhtsafs nvawlptlip syclgtycns
      781 asacfvasdg knlrlyqavv darklldels dpessklige vfnivsqqst arpgciield
      841 aitnkcgsnt qllhvfqedf ilgykphked aegketeiff qpsqgyrppp fsekfylvvi
      901 ekdssgcsvl qmwhlhlksv qaclakptea ssadnklsvp eqktvdsspd vspgispipr
      961 sssianlqta sklilssrlv ysqpldlpvg vevvratpsa ghlssssiyp vclapylivt
     1021 scsdnrvrfw rctvetdlns kteeketyhw rkwplmndeg ednsstvsiv grpvavscsy
     1081 tgrlavaykq piqhngfvsk efsmhvcile cestggsewv leqtihlddl vkvgsvldsr
     1141 vsvdsnlfvy sksdaflnkd kylvpsikhl vhldwvsked gshiltvgvg anifmygrls
     1201 givtdqtssk egvavitlpl ggsikqgvks kwvllrsidl vssvdgtpsl pvslswvrdg
     1261 ilvvgmdcem hvyaqwkhav kfvngesdvf psedsttqdp fktsavmkkt svidgagivd
     1321 dvfgtptviq daglfeaahv lsptlpqyhp tqllelmdlg kvrrakails hlvkciagev
     1381 aivkdteage gtgpkrhlsr tisvsgstak dtitagkdgt rdyteidsip plplyallaa
     1441 dqdatyvaee tskipqgsed hakrktedqy sdlfqiqpvt tedfidfepe kreskskvin
     1501 lsqygptyfg rehasvlssh lmhsslpglt rleqmflval adtvamtste ldenrdknys
     1561 grdtldecgl ryllamrlht clltslpply rvqllhqgls tchfawafhs eaeeelinmi
     1621 paiqkgdpqw selramgigw wvrnintlrr ciekvakasf qrnndaldaa lfylamkkka
     1681 vvwglfrsqh dekmtaffsh nfnedrwrka alknafallg kqrfeqsaaf fllagslkda
     1741 ievclekmed iqlamviarl yesefetsvt ytsilyekil gcqkdgtgfs ctklhsdpfl
     1801 rsiaywimkd ytraldtlle qtpkdddenp vivkscnpvv fsfynylrth pllirryfss
     1861 pegtlatlgl kteksfvdki nlierklfft tanahfkvgc pvlalevlsk ipkirkkstv
     1921 agekdsssps iqtdvsdska lqdgagssdi dwskpistsf algstvessa qfdwsqpavk
     1981 fddepltldw gedkngsdee dkdvgimmkk sdsksedert sdtsvaqtph gevseagdte
     2041 vdviaeqlkf raclkilmte lrtlatgyev dggklrfqly nwlekeiaam heicnhdtgd
     2101 kdycktytkv ngdlldpedi mdkpdigsye rhqierrrlq akrehaerrk wwlqknqall
     2161 rvflsycslh gaqggglasv rmelkfllqe sqqettvkql qsplplpttl pllsasiast
     2221 ktvianpvly lnnhihdily tivqmkspph pniedvkvyt lhslaaslsa siyqalcdsh
     2281 syssqteanq ftgmvyqgll lsdrrrlrte sieehatpns spaqwpgvss linllssaqd
     2341 edqpklnill ceavvavyls llihalatns cnelfrlaah plnsrmwaav fgggvkllvk
     2401 prrqsenipa pplpseemdk hrrrfnmrml vpgrpvkdsn vpppvpaerp sykekfippe
     2461 lsmwdyfmak pflplsdsgv iydsdesihs deeeddafls dvqiqehtda nsyswallhl
     2521 tmvklvlhni knffpiagle ftdlpvtspl giaviknleh weqilqdrmd qfegpppnyi
     2581 ntypsdlgvg agpailrnka miepentpfk skdysalpak rlwhflvkqe llqetfiryi
     2641 ftkkrkqses vedrveqvkq ncvaedhknk veadlgypgg kakiihkesd mimafavnka
     2701 nsneivlast hdvqeldisa llaaqsfiwi geeydresks sddvdfrgst ttlapssaps
     2761 fgvsqiqpsp smpwlgtgqt stgagvlikr nlnnvkrmas hpvhqyyltg aqdgsvrmfe
     2821 wtrpqqlvcf qqagnarvtr myfnaqgnkc gvadgegfls iwqvnqttsn pkpylswqch
     2881 skttsdfafi tssslvatsg qsndnrnvcl wdtlvsssns lihaftchdh gatvlqyapk
     2941 hqllisggrk gyicifdirq rqilftfqah esavkalald psedyfvtgs aegnmkvwrl
     3001 tgynlihsfk nehakqslfr nigagvtqie tvqgnrifsc gadgtlkmrv lpnafnvpsg
     3061 ifdil
//
LOCUS       XP_041324922            2958 aa            linear   VRT 06-MAY-2021
DEFINITION  dmX-like protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324922
VERSION     XP_041324922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468988.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2958
                     /product="dmX-like protein 2 isoform X3"
                     /calculated_mol_wt=329880
     Region          1066..1798
                     /region_name="Rav1p_C"
                     /note="RAVE protein 1 C terminal; pfam12234"
                     /db_xref="CDD:432413"
     Region          2609..>2940
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          2656..2690
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2691..2726
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2732..2772
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2777..2819
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2826..2861
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          2867..2910
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..2958
                     /gene="DMXL2"
                     /coded_by="XM_041468988.1:357..9233"
                     /db_xref="GeneID:121354393"
ORIGIN      
        1 mtynlawdpq gnrlltatdf lqlwappsdd ileededddg ssqikddkvl pvlndwkcvw
       61 qcktatsvhl mswspdgeyf atagkddcll kvwypmtgwk ssllpqenee kkkssedvqf
      121 sfvylahpra vtgfswrnis kymprglvcn vlltscldgi crlwaetllp edtllgeqic
      181 etttssisst isqsgkqkdt iqhaletihh lknmrkgqrr ssvlvthtdv lpdqqgthev
      241 qrhishqana lghfhiaasi npntdipsvl agtafnideg sggfvvhwln nkefhftssi
      301 evfmqhlrqi seqqleqdfd ieaeeeeete ekekglrmkl dhdlsidres etgtgtgsse
      361 hedgeregsp ktsllagprl plptvlldrk idllltewnr npdmlftihp vdgtflvwhv
      421 kyldeytpgi frqvqvsfss ripvafpsgd asslsknimm yacpvfvkds ssaaqqktmd
      481 fpnstlankg psfaqdsanv niispvvmmi skhidgslnq wavtfadksa fttvltvshk
      541 frycghrfhl ndlachsvlp llltsshhna lltpesdtsw dsdrisrmmd pikhkrgssk
      601 qqlknaatrt fhdpnaiyse lilwrvdpig plsytggvse larinslhts afsnvawlpt
      661 lipsyclgty cnsasacfva sdgknlrlyq avvdarklld elsdpesskl igevfnivsq
      721 qstarpgcii eldaitnkcg sntqllhvfq edfilgykph kedaegkete iffqpsqgyr
      781 pppfsekfyl vviekdssgc svlqmwhlhl ksvqaclakp teassadnkl svpeqktvds
      841 spdvspgisp iprsssianl qtasklilss rlvysqpldl pvgvevvrat psaghlssss
      901 iypvclapyl ivtscsdnrv rfwrctvetd lnskteeket yhwrkwplmn degednsstv
      961 sivgrpvavs csytgrlava ykqpiqhngf vskefsmhvc ilecestggs ewvleqtihl
     1021 ddlvkvgsvl dsrvsvdsnl fvysksdafl nkdkylvpsi khlvhldwvs kedgshiltv
     1081 gvganifmyg rlsgivtdqt sskegvavit lplggsikqg vkskwvllrs idlvssvdgt
     1141 pslpvslswv rdgilvvgmd cemhvyaqwk havkfvnges dvfpsedstt qdpfktsavm
     1201 kktsvidgag ivddvfgtpt viqdaglfea ahvlsptlpq yhptqllelm dlgkvrraka
     1261 ilshlvkcia gevaivkdte agegtgpkrh lsrtisvsgs takdtitagk dgtrdyteid
     1321 sipplplyal laadqdatyv aeetskipqg sedhakrkte dqysdlfqiq pvttedfidf
     1381 epekresksk vinlsqygpt yfgrehasvl sshlmhsslp gltrleqmfl valadtvamt
     1441 steldenrdk nysgrdtlde cglryllamr lhtclltslp plyrvqllhq glstchfawa
     1501 fhseaeeeli nmipaiqkgd pqwselramg igwwvrnint lrrciekvak asfqrnndal
     1561 daalfylamk kkavvwglfr sqhdekmtaf fshnfnedrw rkaalknafa llgkqrfeqs
     1621 aaffllagsl kdaievclek mediqlamvi arlyesefet svtytsilye kilgcqkdgt
     1681 gfsctklhsd pflrsiaywi mkdytraldt lleqtpkddd enpvivkscn pvvfsfynyl
     1741 rthpllirry fsspegtlat lglkteksfv dkinlierkl ffttanahfk vgcpvlalev
     1801 lskipkirkk stvagekdss spsiqtdvsd skalqdgags sdidwskpis tsfalgstve
     1861 ssaqfdwsqp avkfddeplt ldwgedkngs deedkdvgim mkksdsksed ertsdtsvaq
     1921 tphgevseag dtevdviaeq lkfraclkil mtelrtlatg yevdggklrf qlynwlekei
     1981 aamheicnhd tgdkdyckty tkvngdlldp edimdkpdig syerhqierr rlqakrehae
     2041 rrkwwlqknq allrvflsyc slhgaqgggl asvrmelkfl lqesqqettv kqlqsplplp
     2101 ttlpllsasi astktvianp vlylnnhihd ilytivqmks pphpniedvk vytlhslaas
     2161 lsasiyqalc dshsyssqte anqftgmvyq glllsdrrrl rtesieehat pnsspaqwpg
     2221 vsslinllss aqdedqpkln illceavvav ylsllihala tnscnelfrl aahplnsrmw
     2281 aavfgggvkl lvkprrqsen ipapplpsee mdkhrrrfnm rmlvpgrpvk dsnvpppvpa
     2341 erpsykekfi ppelsmwdyf makpflplsd sgviydsdes ihsdeeedda flsdvqiqeh
     2401 tdansyswal lhltmvklvl hniknffpia gleftdlpvt splgiavikn lehweqilqd
     2461 rmdqfegppp nyintypsdl gvgagpailr nkamiepent pfkskdysal pakrlwhflv
     2521 kqellqetfi ryiftkkrkq sesvedrveq vkqncvaedh knkveadlgy pggkakiihk
     2581 esdmimafav nkansneivl asthdvqeld isallaaqsf iwigeeydre skssddvdfr
     2641 gstttlapss apsfgvsqiq pspsmpwlgt gqtstgagvl ikrnlnnvkr mashpvhqyy
     2701 ltgaqdgsvr mfewtrpqql vcfqqagnar vtrmyfnaqg nkcgvadgeg flsiwqvnqt
     2761 tsnpkpylsw qchskttsdf afitssslva tsgqsndnrn vclwdtlvss snslihaftc
     2821 hdhgatvlqy apkhqllisg grkgyicifd irqrqilftf qahesavkal aldpsedyfv
     2881 tgsaegnmkv wrltgynlih sfknehakqs lfrnigagvt qietvqgnri fscgadgtlk
     2941 mrvlpnafnv psgifdil
//
LOCUS       XP_041324923             277 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041324923
VERSION     XP_041324923.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468989.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="Krueppel-like factor 13"
                     /calculated_mol_wt=30340
     Region          7..156
                     /region_name="KLF13_N"
                     /note="N-terminal domain of Kruppel-like factor 13;
                     cd21571"
                     /db_xref="CDD:409236"
     Region          <143..246
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          157..179
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(164,166,168,170..171,174..175,178,194,196,200..201,
                     204..205,208,222,224,226,228..229,232..233,236)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          187..209
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          215..237
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          217..237
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..277
                     /gene="KLF13"
                     /coded_by="XM_041468989.1:439..1272"
                     /db_xref="GeneID:121354395"
ORIGIN      
        1 mataayvdhf aaeclvsmss ravihspkge pdpqpdaail pssngedrre vretgkdngs
       61 sllvvasila dlnqhvpnsp alrtektetl diteqihfsi apkefgeesl ssagksgger
      121 aatptslaav tepsprqknk rirswtdpgs pqkkhkchyv gcekvygkss hlkahlrtht
      181 gerpfecnwq gcnkkfarsd elarhyrtht gekkfscplc ekrfmrsdhl tkharrhanf
      241 hpsmlkrrsg sgsrtgsvsd ysrsdasspt ispassp
//
LOCUS       XP_041324924             487 aa            linear   VRT 06-MAY-2021
DEFINITION  la-related protein 6 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324924
VERSION     XP_041324924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468990.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..487
                     /product="la-related protein 6 isoform X1"
                     /calculated_mol_wt=53781
     Region          87..163
                     /region_name="LARP_6"
                     /note="La RNA-binding domain of La-related protein 6;
                     cd08033"
                     /db_xref="CDD:153402"
     Site            order(93,96..97,102,105..106,108,129..131)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:153402"
     Region          178..284
                     /region_name="RRM_LARP6"
                     /note="RNA recognition motif (RRM) found in La-related
                     protein 6 (LARP6) and similar proteins; cd12289"
                     /db_xref="CDD:409731"
     Region          445..475
                     /region_name="SUZ-C"
                     /note="SUZ-C motif; pfam12901"
                     /db_xref="CDD:463745"
     CDS             1..487
                     /gene="LARP6"
                     /coded_by="XM_041468990.1:76..1539"
                     /db_xref="GeneID:121354396"
ORIGIN      
        1 maqpqpaepg aapagpelpa gsgpvqirva vqaaaeedee deeeegggga qcpscseeds
       61 grcgrssgge ndddsdqnwk ppendliqkl iaqieyyfsd enlekdafll khvrrnkmgy
      121 vsvklltsfk kvkhltrdwr ttayalkyss tlelnddnkk vrrntpvpvf psenvptrml
      181 lvydihkise lqalnkeeng cmqerimehl lkafvtfgvi ssvrilkpgr dlppdirrvs
      241 nrytqlgtqe caiiefeeve aavrahdfmc aenketgmkv vqigmkppkk kvpkdkshde
      301 dtskslkkar slnkrveelq fagdessans ssdpesnpts plsgrkrttt nttsnlspmi
      361 hpnnhlspnm sprsspwnsp sslrkvtkks plaedsklna stspeiprkh tdyssdssit
      421 psgspwvqrr kaqtltqeks pvsspmlvrk iqnadglpvg vlrlpkgpdg tkgfhngcer
      481 rkamkge
//
LOCUS       XP_041324925             370 aa            linear   VRT 06-MAY-2021
DEFINITION  la-related protein 6 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324925
VERSION     XP_041324925.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468991.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="la-related protein 6 isoform X2"
                     /calculated_mol_wt=41228
     Region          <1..46
                     /region_name="LAM"
                     /note="LA motif RNA-binding domain; cl02755"
                     /db_xref="CDD:470666"
     Region          61..167
                     /region_name="RRM_LARP6"
                     /note="RNA recognition motif (RRM) found in La-related
                     protein 6 (LARP6) and similar proteins; cd12289"
                     /db_xref="CDD:409731"
     Region          328..358
                     /region_name="SUZ-C"
                     /note="SUZ-C motif; pfam12901"
                     /db_xref="CDD:463745"
     CDS             1..370
                     /gene="LARP6"
                     /coded_by="XM_041468991.1:409..1521"
                     /db_xref="GeneID:121354396"
ORIGIN      
        1 mgyvsvkllt sfkkvkhltr dwrttayalk ysstlelndd nkkvrrntpv pvfpsenvpt
       61 rmllvydihk iselqalnke engcmqerim ehllkafvtf gvissvrilk pgrdlppdir
      121 rvsnrytqlg tqecaiiefe eveaavrahd fmcaenketg mkvvqigmkp pkkkvpkdks
      181 hdedtskslk karslnkrve elqfagdess ansssdpesn ptsplsgrkr tttnttsnls
      241 pmihpnnhls pnmsprsspw nspsslrkvt kksplaedsk lnastspeip rkhtdyssds
      301 sitpsgspwv qrrkaqtltq ekspvsspml vrkiqnadgl pvgvlrlpkg pdgtkgfhng
      361 cerrkamkge
//
LOCUS       XP_041324926             353 aa            linear   VRT 06-MAY-2021
DEFINITION  adenosine deaminase-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324926
VERSION     XP_041324926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468992.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..353
                     /product="adenosine deaminase-like protein"
                     /calculated_mol_wt=39673
     Region          17..344
                     /region_name="ADA_AMPD"
                     /note="Adenosine/AMP deaminase. Adenosine deaminases
                     (ADAs) are present in pro- and eukaryotic organisms and
                     catalyze the zinc dependent irreversible deamination of
                     adenosine nucleosides to inosine nucleosides and ammonia.
                     The eukaryotic AMP deaminase...; cd00443"
                     /db_xref="CDD:238250"
     Site            order(23,25,207,210,231,292..293)
                     /site_type="active"
                     /db_xref="CDD:238250"
     CDS             1..353
                     /gene="ADAL"
                     /coded_by="XM_041468992.1:13..1074"
                     /db_xref="GeneID:121354398"
ORIGIN      
        1 maaerdrere lrfyrrlpka elhahlngci statmkklma qkpnlqiqng mtvidkgkkr
       61 tldecfqmfq iiyqvttrte dillitkdvi kefaddgvky lelrstpree nstgmtkrmy
      121 vetvlegikq cqeegldidv rlliainrrd gpavakqtvk laeefllssd gvvvgldlsg
      181 dptaghgqdf leplseakka glklalhlce ipnqeeetki llglppdrig hgtflnstaa
      241 gseeivslvq qnhipiefcm tsniksqtvp scdkhhfgyw ysmghpavlc tddkgvfatd
      301 lsqeyelvak tfnltrsqmw dlsyasinyi fasnavkskl reqwcklkpa lfd
//
LOCUS       XP_041324927            1006 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324927
VERSION     XP_041324927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1006
                     /product="thrombospondin type-1 domain-containing protein
                     4 isoform X1"
                     /calculated_mol_wt=111601
     Region          56..>80
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          316..410
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          412..527
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          615..664
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          668..724
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          727..781
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          785..838
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          844..900
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          904..955
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          963..993
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1006
                     /gene="THSD4"
                     /coded_by="XM_041468993.1:252..3272"
                     /db_xref="GeneID:121354399"
ORIGIN      
        1 mvdslivslr llsslavlgf qlvipqpsie hrkvpqriee qgdgaedsgg gvpglwgswg
       61 pwsacsrscs ggvmeqtrpc lpayyrergy rrpgrhfpas eralphpsah hedslsaypg
      121 hvisairtsv plhrneeqpw aalrnssqag raalrgsrhs qgprhsarpd rrsrnknpig
      181 pgkygygkvp yilplqtdtg qqpqklrrqr qssrslfhqs pysqaaapsl qhgnlyqepa
      241 gpqaghqvlg psvyqspsfp vsqslfhggd sspqalqgqp qpqraaaivc igaykqyklc
      301 ntnmcpessr nirevqcasy nnkpfmgrfy ewepfaevkg sqkcelncra igyrfyvrqa
      361 etvidgtpcd pngtaicvag qcksigcddy lgsdkvidkc gicggdntac kvvsgvfkht
      421 ltnlgyhkiv eipegatkin itemsksnny lalrsrsgrs iingnwaidr pgryegggtm
      481 ftyrrpneis stagesflad gptnevldvy mihqqpnpgi hyeyiipgdn vispqllahr
      541 rpgeplngql gmpestshed edlhretdil tgqsagtfpv iqpgrfpshq penqvpamqp
      601 prqnrehnwk qvgktecttt cgkgsqypif hcvnrithee vpegycdsst kpipeeeacn
      661 lfpcpafwdi gewsecsktc glgmqhrqil crqiyanrtl tvqqyrcqhl ekpdttstcq
      721 lkicsewqir tewtscsvpc gvgqrtrdvk cvsnlgdivd deecnmklrp ndiencdmgp
      781 cakswfltew sdrcsaecgd girtrsvvcm tnhvsslple gcgnnrpset tpcnngpcag
      841 kvewfaggwt qcstecgsgt qqrevicvrk tegnfdvlnp yecsylekpp sqqscylkpc
      901 gskwfhtews tcsksceggf rvrevrclsd dmaassqcdp qlkpeekepc ntqdcvpeid
      961 enckdkyync nvvvqarlcv ytyyktacca scsrvanrqp gflgrr
//
LOCUS       XP_041324928            1006 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 4 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324928
VERSION     XP_041324928.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468994.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1006
                     /product="thrombospondin type-1 domain-containing protein
                     4 isoform X1"
                     /calculated_mol_wt=111601
     Region          56..>80
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          316..410
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          412..527
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          615..664
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          668..724
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          727..781
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          785..838
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          844..900
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          904..955
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          963..993
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1006
                     /gene="THSD4"
                     /coded_by="XM_041468994.1:214..3234"
                     /db_xref="GeneID:121354399"
ORIGIN      
        1 mvdslivslr llsslavlgf qlvipqpsie hrkvpqriee qgdgaedsgg gvpglwgswg
       61 pwsacsrscs ggvmeqtrpc lpayyrergy rrpgrhfpas eralphpsah hedslsaypg
      121 hvisairtsv plhrneeqpw aalrnssqag raalrgsrhs qgprhsarpd rrsrnknpig
      181 pgkygygkvp yilplqtdtg qqpqklrrqr qssrslfhqs pysqaaapsl qhgnlyqepa
      241 gpqaghqvlg psvyqspsfp vsqslfhggd sspqalqgqp qpqraaaivc igaykqyklc
      301 ntnmcpessr nirevqcasy nnkpfmgrfy ewepfaevkg sqkcelncra igyrfyvrqa
      361 etvidgtpcd pngtaicvag qcksigcddy lgsdkvidkc gicggdntac kvvsgvfkht
      421 ltnlgyhkiv eipegatkin itemsksnny lalrsrsgrs iingnwaidr pgryegggtm
      481 ftyrrpneis stagesflad gptnevldvy mihqqpnpgi hyeyiipgdn vispqllahr
      541 rpgeplngql gmpestshed edlhretdil tgqsagtfpv iqpgrfpshq penqvpamqp
      601 prqnrehnwk qvgktecttt cgkgsqypif hcvnrithee vpegycdsst kpipeeeacn
      661 lfpcpafwdi gewsecsktc glgmqhrqil crqiyanrtl tvqqyrcqhl ekpdttstcq
      721 lkicsewqir tewtscsvpc gvgqrtrdvk cvsnlgdivd deecnmklrp ndiencdmgp
      781 cakswfltew sdrcsaecgd girtrsvvcm tnhvsslple gcgnnrpset tpcnngpcag
      841 kvewfaggwt qcstecgsgt qqrevicvrk tegnfdvlnp yecsylekpp sqqscylkpc
      901 gskwfhtews tcsksceggf rvrevrclsd dmaassqcdp qlkpeekepc ntqdcvpeid
      961 enckdkyync nvvvqarlcv ytyyktacca scsrvanrqp gflgrr
//
LOCUS       XP_041324930             647 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin type-1 domain-containing protein 4 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324930
VERSION     XP_041324930.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468996.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..647
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..647
                     /product="thrombospondin type-1 domain-containing protein
                     4 isoform X2"
                     /calculated_mol_wt=72111
     Region          53..168
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          256..305
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          309..365
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          368..422
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          426..479
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          485..541
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          545..596
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          604..634
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..647
                     /gene="THSD4"
                     /coded_by="XM_041468996.1:159..2102"
                     /db_xref="GeneID:121354399"
ORIGIN      
        1 mfvsyliltl lcfqtamlar pggesigcdd ylgsdkvidk cgicggdnta ckvvsgvfkh
       61 tltnlgyhki veipegatki nitemsksnn ylalrsrsgr siingnwaid rpgryegggt
      121 mftyrrpnei sstagesfla dgptnevldv ymihqqpnpg ihyeyiipgd nvispqllah
      181 rrpgeplngq lgmpestshe dedlhretdi ltgqsagtfp viqpgrfpsh qpenqvpamq
      241 pprqnrehnw kqvgktectt tcgkgsqypi fhcvnrithe evpegycdss tkpipeeeac
      301 nlfpcpafwd igewsecskt cglgmqhrqi lcrqiyanrt ltvqqyrcqh lekpdttstc
      361 qlkicsewqi rtewtscsvp cgvgqrtrdv kcvsnlgdiv ddeecnmklr pndiencdmg
      421 pcakswflte wsdrcsaecg dgirtrsvvc mtnhvsslpl egcgnnrpse ttpcnngpca
      481 gkvewfaggw tqcstecgsg tqqrevicvr ktegnfdvln pyecsylekp psqqscylkp
      541 cgskwfhtew stcskscegg frvrevrcls ddmaassqcd pqlkpeekep cntqdcvpei
      601 denckdkyyn cnvvvqarlc vytyyktacc ascsrvanrq pgflgrr
//
LOCUS       XP_041324931             666 aa            linear   VRT 06-MAY-2021
DEFINITION  histidine decarboxylase [Pyrgilauda ruficollis].
ACCESSION   XP_041324931
VERSION     XP_041324931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468997.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..666
                     /product="histidine decarboxylase"
                     /calculated_mol_wt=74385
     Region          35..413
                     /region_name="Pyridoxal_deC"
                     /note="Pyridoxal-dependent decarboxylase conserved domain;
                     pfam00282"
                     /db_xref="CDD:395219"
     Site            order(149..150,153,243,272,275,301,304)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding site [chemical
                     binding]"
                     /db_xref="CDD:99743"
     Site            304
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99743"
     CDS             1..666
                     /gene="HDC"
                     /coded_by="XM_041468997.1:371..2371"
                     /db_xref="GeneID:121354401"
ORIGIN      
        1 mepeeyrqrg kemvdyicqy lsnvrerrvt pdvqpgymra qlpdsapmdp dswdnifgdi
       61 ekiimpgvvh wqsphmhayf paltswpsll gdmladainc lgftwasspa ctelemnvmd
      121 wlakmlglpd kflhhhpdsv gggvlqstvs estlvallaa rknkilemkv sepdtdesvl
      181 nsrliayasd qahssvekag lislvkikfl pvdenfslrg etlkkaiaed rkkglvpvfv
      241 catlgttgvc afdnlselgp vcdaeglwlh idaayagtaf vcpefrlfld gieyadsftf
      301 npskwmmvhf dctgfwvkdk yklhqtfsvn pvylrhansg aaidfmhwqi plsrrfrslk
      361 lwfvlrsfgv kklqahvrqg tetakffesl vksdplfeip akrhlglvvf rlkgpnwlte
      421 kllkelsssg rlflipatih dkfilrftvt sqfttredil qdwsiiqhta aqiisqnygl
      481 hcinsgdgag ipttivqpss daiinvpqly ldggkyktps rktvvqpkkv svspskcvis
      541 qqvkgqedpl ddcfpedvqn vtkhkltsfl fsyfsvqgkk ktarslscts vpvtgnleqc
      601 npkaaatdkk eshasarvls rlpedmmmfk kgafkklikf ysvpsfpecs iqcglqlpcc
      661 plqaiv
//
LOCUS       XP_041324932            1088 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324932
VERSION     XP_041324932.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468998.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1088
                     /product="semaphorin-6D isoform X1"
                     /calculated_mol_wt=121310
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1088
                     /gene="SEMA6D"
                     /coded_by="XM_041468998.1:233..3499"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlf slfvsynhst ggyiqdveyg ntaqlgdche ilpttatpdy kifgdptsdm
      601 efssasittm asipvispkv igswkpkvtg srkfvvqddp ntsdysdpls gvpkgvrwev
      661 qsgesnqmvh mnvlitcvfa afvlgafiag vavycyrdif vrksrkihkd aesaqsctds
      721 sgsfaklngl fdspvkeyqq nidspklytn lltsrkelpp ngdtkammmd hrgqppelaa
      781 lptpestpvl qqktlqamks qsdkahgnln asrketplks pqffpssppp hsplshghip
      841 saivlpnath dyntsfsnsn ahkadkkmqh idhpltksss krdhrrsvds rntlndflkh
      901 lnettnnpka imgdiqvahq tlmldpmgnm seippkvpnr easlysppst lprnsptkrv
      961 dvpttpavpm tslerqrgyh knssqrhsis alpknlnspn gvllsrqpsi nrggymapta
     1021 gtkmdymqgt pvsvhlqpsl srqssytsng tlprtgikrt pslkpdvppk psfvpqttpv
     1081 rplnkysy
//
LOCUS       XP_041324933            1088 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324933
VERSION     XP_041324933.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041468999.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1088
                     /product="semaphorin-6D isoform X1"
                     /calculated_mol_wt=121310
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1088
                     /gene="SEMA6D"
                     /coded_by="XM_041468999.1:148..3414"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlf slfvsynhst ggyiqdveyg ntaqlgdche ilpttatpdy kifgdptsdm
      601 efssasittm asipvispkv igswkpkvtg srkfvvqddp ntsdysdpls gvpkgvrwev
      661 qsgesnqmvh mnvlitcvfa afvlgafiag vavycyrdif vrksrkihkd aesaqsctds
      721 sgsfaklngl fdspvkeyqq nidspklytn lltsrkelpp ngdtkammmd hrgqppelaa
      781 lptpestpvl qqktlqamks qsdkahgnln asrketplks pqffpssppp hsplshghip
      841 saivlpnath dyntsfsnsn ahkadkkmqh idhpltksss krdhrrsvds rntlndflkh
      901 lnettnnpka imgdiqvahq tlmldpmgnm seippkvpnr easlysppst lprnsptkrv
      961 dvpttpavpm tslerqrgyh knssqrhsis alpknlnspn gvllsrqpsi nrggymapta
     1021 gtkmdymqgt pvsvhlqpsl srqssytsng tlprtgikrt pslkpdvppk psfvpqttpv
     1081 rplnkysy
//
LOCUS       XP_041324934            1078 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324934
VERSION     XP_041324934.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469000.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1078
                     /product="semaphorin-6D isoform X2"
                     /calculated_mol_wt=120127
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1078
                     /gene="SEMA6D"
                     /coded_by="XM_041469000.1:233..3469"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlt ggyiqdveyg ntaqlgdche ilpttatpdy kifgdptsdm efssasittm
      601 asipvispkv igswkpkvtg srkfvvqddp ntsdysdpls gvpkgvrwev qsgesnqmvh
      661 mnvlitcvfa afvlgafiag vavycyrdif vrksrkihkd aesaqsctds sgsfaklngl
      721 fdspvkeyqq nidspklytn lltsrkelpp ngdtkammmd hrgqppelaa lptpestpvl
      781 qqktlqamks qsdkahgnln asrketplks pqffpssppp hsplshghip saivlpnath
      841 dyntsfsnsn ahkadkkmqh idhpltksss krdhrrsvds rntlndflkh lnettnnpka
      901 imgdiqvahq tlmldpmgnm seippkvpnr easlysppst lprnsptkrv dvpttpavpm
      961 tslerqrgyh knssqrhsis alpknlnspn gvllsrqpsi nrggymapta gtkmdymqgt
     1021 pvsvhlqpsl srqssytsng tlprtgikrt pslkpdvppk psfvpqttpv rplnkysy
//
LOCUS       XP_041324935            1069 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324935
VERSION     XP_041324935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1069
                     /product="semaphorin-6D isoform X3"
                     /calculated_mol_wt=119261
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1069
                     /gene="SEMA6D"
                     /coded_by="XM_041469001.1:233..3442"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlf slfvsynhst ggyiqdveyg ntaqlgdchd mefssasitt masipvispk
      601 vigswkpkvt gsrkfvvqdd pntsdysdpl sgvpkgvrwe vqsgesnqmv hmnvlitcvf
      661 aafvlgafia gvavycyrdi fvrksrkihk daesaqsctd ssgsfaklng lfdspvkeyq
      721 qnidspklyt nlltsrkelp pngdtkammm dhrgqppela alptpestpv lqqktlqamk
      781 sqsdkahgnl nasrketplk spqffpsspp phsplshghi psaivlpnat hdyntsfsns
      841 nahkadkkmq hidhpltkss skrdhrrsvd srntlndflk hlnettnnpk aimgdiqvah
      901 qtlmldpmgn mseippkvpn reaslyspps tlprnsptkr vdvpttpavp mtslerqrgy
      961 hknssqrhsi salpknlnsp ngvllsrqps inrggymapt agtkmdymqg tpvsvhlqps
     1021 lsrqssytsn gtlprtgikr tpslkpdvpp kpsfvpqttp vrplnkysy
//
LOCUS       XP_041324936            1059 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324936
VERSION     XP_041324936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1059
                     /product="semaphorin-6D isoform X4"
                     /calculated_mol_wt=118079
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1059
                     /gene="SEMA6D"
                     /coded_by="XM_041469002.1:233..3412"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlt ggyiqdveyg ntaqlgdchd mefssasitt masipvispk vigswkpkvt
      601 gsrkfvvqdd pntsdysdpl sgvpkgvrwe vqsgesnqmv hmnvlitcvf aafvlgafia
      661 gvavycyrdi fvrksrkihk daesaqsctd ssgsfaklng lfdspvkeyq qnidspklyt
      721 nlltsrkelp pngdtkammm dhrgqppela alptpestpv lqqktlqamk sqsdkahgnl
      781 nasrketplk spqffpsspp phsplshghi psaivlpnat hdyntsfsns nahkadkkmq
      841 hidhpltkss skrdhrrsvd srntlndflk hlnettnnpk aimgdiqvah qtlmldpmgn
      901 mseippkvpn reaslyspps tlprnsptkr vdvpttpavp mtslerqrgy hknssqrhsi
      961 salpknlnsp ngvllsrqps inrggymapt agtkmdymqg tpvsvhlqps lsrqssytsn
     1021 gtlprtgikr tpslkpdvpp kpsfvpqttp vrplnkysy
//
LOCUS       XP_041324937            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041324937
VERSION     XP_041324937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469003.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="semaphorin-6D isoform X5"
                     /calculated_mol_wt=115328
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1032
                     /gene="SEMA6D"
                     /coded_by="XM_041469003.1:233..3331"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlf slfvsynhst ggyiqdveyg ntaqlgdche ilpttatpdy kifgdptsgv
      601 rwevqsgesn qmvhmnvlit cvfaafvlga fiagvavycy rdifvrksrk ihkdaesaqs
      661 ctdssgsfak lnglfdspvk eyqqnidspk lytnlltsrk elppngdtka mmmdhrgqpp
      721 elaalptpes tpvlqqktlq amksqsdkah gnlnasrket plkspqffps sppphsplsh
      781 ghipsaivlp nathdyntsf snsnahkadk kmqhidhplt kssskrdhrr svdsrntlnd
      841 flkhlnettn npkaimgdiq vahqtlmldp mgnmseippk vpnreaslys ppstlprnsp
      901 tkrvdvpttp avpmtslerq rgyhknssqr hsisalpknl nspngvllsr qpsinrggym
      961 aptagtkmdy mqgtpvsvhl qpslsrqssy tsngtlprtg ikrtpslkpd vppkpsfvpq
     1021 ttpvrplnky sy
//
LOCUS       XP_041324939            1022 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324939
VERSION     XP_041324939.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469005.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1022
                     /product="semaphorin-6D isoform X6"
                     /calculated_mol_wt=114145
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1022
                     /gene="SEMA6D"
                     /coded_by="XM_041469005.1:233..3301"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlt ggyiqdveyg ntaqlgdche ilpttatpdy kifgdptsgv rwevqsgesn
      601 qmvhmnvlit cvfaafvlga fiagvavycy rdifvrksrk ihkdaesaqs ctdssgsfak
      661 lnglfdspvk eyqqnidspk lytnlltsrk elppngdtka mmmdhrgqpp elaalptpes
      721 tpvlqqktlq amksqsdkah gnlnasrket plkspqffps sppphsplsh ghipsaivlp
      781 nathdyntsf snsnahkadk kmqhidhplt kssskrdhrr svdsrntlnd flkhlnettn
      841 npkaimgdiq vahqtlmldp mgnmseippk vpnreaslys ppstlprnsp tkrvdvpttp
      901 avpmtslerq rgyhknssqr hsisalpknl nspngvllsr qpsinrggym aptagtkmdy
      961 mqgtpvsvhl qpslsrqssy tsngtlprtg ikrtpslkpd vppkpsfvpq ttpvrplnky
     1021 sy
//
LOCUS       XP_041324940            1013 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041324940
VERSION     XP_041324940.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469006.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1013
                     /product="semaphorin-6D isoform X7"
                     /calculated_mol_wt=113279
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1013
                     /gene="SEMA6D"
                     /coded_by="XM_041469006.1:233..3274"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlf slfvsynhst ggyiqdveyg ntaqlgdchg vrwevqsges nqmvhmnvli
      601 tcvfaafvlg afiagvavyc yrdifvrksr kihkdaesaq sctdssgsfa klnglfdspv
      661 keyqqnidsp klytnlltsr kelppngdtk ammmdhrgqp pelaalptpe stpvlqqktl
      721 qamksqsdka hgnlnasrke tplkspqffp ssppphspls hghipsaivl pnathdynts
      781 fsnsnahkad kkmqhidhpl tkssskrdhr rsvdsrntln dflkhlnett nnpkaimgdi
      841 qvahqtlmld pmgnmseipp kvpnreasly sppstlprns ptkrvdvptt pavpmtsler
      901 qrgyhknssq rhsisalpkn lnspngvlls rqpsinrggy maptagtkmd ymqgtpvsvh
      961 lqpslsrqss ytsngtlprt gikrtpslkp dvppkpsfvp qttpvrplnk ysy
//
LOCUS       XP_041324941            1003 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041324941
VERSION     XP_041324941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469007.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1003
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1003
                     /product="semaphorin-6D isoform X8"
                     /calculated_mol_wt=112097
     Region          49..513
                     /region_name="Sema_6D"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorin 6D (Sema6D); cd11269"
                     /db_xref="CDD:200530"
     Site            order(109..112,163..164,189,191..192,199,213..215,220,
                     267..268,271,394)
                     /site_type="other"
                     /note="plexin binding site [polypeptide binding]"
                     /db_xref="CDD:200530"
     Site            order(244,286,288,290..292,294,318,320..324,353,415..416,
                     418)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:200530"
     Region          514..>535
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..1003
                     /gene="SEMA6D"
                     /coded_by="XM_041469007.1:233..3244"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mrlpvlcalv tllslsrcra vsfpededpi nvvdyhysrq ypvfrgrpsg nesqhrldfq
       61 lmlkirdtly itgrdqvytv nlnevpksev ipskkltwrs kqqdrencam kgkhkdechn
      121 fikvfvprnd emvfvcgtna fnpmcryyrl ntleydgeei sglarcpfda rqtnvalfad
      181 gklysatvad flasdaviyr smgdgsalrt ikydskwike phflhaieyg nyvyfffrei
      241 avehntlgka vysrvarick ndmggsqrvl ekhwtsflka rlncsvpgds ffyfdvlqsi
      301 tdiieingvp tvvgvfttql nsipgsavca fsmddiekvf kgrfkeqktp dsvwtavped
      361 kvpkprpgcc akhglaeayk tsidfpdetl sfikshplmd savpsvteep wftktrvryr
      421 ltaiavdhaa gpyqnytvif vgseagvvlk ilaktrpfsl ndsilleeie aynhakcnae
      481 seedrrvisl qldrdhhalf vafsscvvrl plsrcerhgs ckkaciasrd pycgwldhea
      541 cgrvtpgmlt ggyiqdveyg ntaqlgdchg vrwevqsges nqmvhmnvli tcvfaafvlg
      601 afiagvavyc yrdifvrksr kihkdaesaq sctdssgsfa klnglfdspv keyqqnidsp
      661 klytnlltsr kelppngdtk ammmdhrgqp pelaalptpe stpvlqqktl qamksqsdka
      721 hgnlnasrke tplkspqffp ssppphspls hghipsaivl pnathdynts fsnsnahkad
      781 kkmqhidhpl tkssskrdhr rsvdsrntln dflkhlnett nnpkaimgdi qvahqtlmld
      841 pmgnmseipp kvpnreasly sppstlprns ptkrvdvptt pavpmtsler qrgyhknssq
      901 rhsisalpkn lnspngvlls rqpsinrggy maptagtkmd ymqgtpvsvh lqpslsrqss
      961 ytsngtlprt gikrtpslkp dvppkpsfvp qttpvrplnk ysy
//
LOCUS       XP_041324942             887 aa            linear   VRT 06-MAY-2021
DEFINITION  semaphorin-6D isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041324942
VERSION     XP_041324942.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469008.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..887
                     /product="semaphorin-6D isoform X9"
                     /calculated_mol_wt=98136
     Region          <1..312
                     /region_name="Sema"
                     /note="The Sema domain, a protein interacting module, of
                     semaphorins and plexins; cl15693"
                     /db_xref="CDD:472829"
     Region          313..>342
                     /region_name="PSI"
                     /note="Plexin repeat; pfam01437"
                     /db_xref="CDD:396154"
     CDS             1..887
                     /gene="SEMA6D"
                     /coded_by="XM_041469008.1:168..2831"
                     /db_xref="GeneID:121354402"
ORIGIN      
        1 mgdgsalrti kydskwikep hflhaieygn yvyfffreia vehntlgkav ysrvarickn
       61 dmggsqrvle khwtsflkar lncsvpgdsf fyfdvlqsit diieingvpt vvgvfttqln
      121 sipgsavcaf smddiekvfk grfkeqktpd svwtavpedk vpkprpgcca khglaeaykt
      181 sidfpdetls fikshplmds avpsvteepw ftktrvryrl taiavdhaag pyqnytvifv
      241 gseagvvlki laktrpfsln dsilleeiea ynhakcnaes eedrrvislq ldrdhhalfv
      301 afsscvvrlp lsrcerhgsc kkaciasrdp ycgwldheac grvtpgmlfs lfvsynhstg
      361 gyiqdveygn taqlgdchei lpttatpdyk ifgdptsdme fssasittma sipvispkvi
      421 gswkpkvtgs rkfvvqddpn tsdysdplsg vpkgvrwevq sgesnqmvhm nvlitcvfaa
      481 fvlgafiagv avycyrdifv rksrkihkda esaqsctdss gsfaklnglf dspvkeyqqn
      541 idspklytnl ltsrkelppn gdtkammmdh rgqppelaal ptpestpvlq qktlqamksq
      601 sdkahgnlna srketplksp qffpssppph splshghips aivlpnathd yntsfsnsna
      661 hkadkkmqhi dhpltksssk rdhrrsvdsr ntlndflkhl nettnnpkai mgdiqvahqt
      721 lmldpmgnms eippkvpnre aslysppstl prnsptkrvd vpttpavpmt slerqrgyhk
      781 nssqrhsisa lpknlnspng vllsrqpsin rggymaptag tkmdymqgtp vsvhlqpsls
      841 rqssytsngt lprtgikrtp slkpdvppkp sfvpqttpvr plnkysy
//
LOCUS       XP_041324944            1118 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324944
VERSION     XP_041324944.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469010.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1118
                     /product="ubiquitin carboxyl-terminal hydrolase 8 isoform
                     X1"
                     /calculated_mol_wt=127941
     Region          6..116
                     /region_name="USP8_dimer"
                     /note="USP8 dimerization domain; pfam08969"
                     /db_xref="CDD:462647"
     Region          197..309
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain; smart00450"
                     /db_xref="CDD:197731"
     Region          777..1106
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(781,786,1067,1085)
                     /site_type="active"
                     /db_xref="CDD:239139"
     CDS             1..1118
                     /gene="USP8"
                     /coded_by="XM_041469010.1:222..3578"
                     /db_xref="GeneID:121354403"
ORIGIN      
        1 mpavasvpke lylstslkdl nkktevkpek tstksyvqsa lkifkaaees rldgdeekay
       61 ilymkyvavy nlirkrpdfk qqqdyfhsil gptnlkkald eaeilsdslk lryeeaevrk
      121 kleerdrqel qkkqepkddg kssaknsses avdskgksqr ingetkhsle rkdqsdslsg
      181 avtperlfam msdknielli mdarkskdyq escipksisv peeaihpgdt ayliearlpe
      241 dsrdswkrrg qfhyvilldw fssaedlklg ttlqslkdal fkwesktilq neplileggy
      301 enwllcfpqy ttnarvtppq hgrteavtvs ldftypslee paplppvvae neemgdnlee
      361 rlkslnrpni qdaavpksds sfvvnpmsvt rsipevdrsk kpslkilgdn rakapstisd
      421 sqsgesgriv pdrstkpvhd grstlteeek srihaetaal leknrrekel rerlqqerke
      481 rlkrekeeqe rkekeqeqka keeqkekehk eklqqskedk eqerdeqikr eeeekeqera
      541 hreaveakkq nknepesiga krieidktsm eerekgtrtp etqkralgda sqtfvtvpgk
      601 qmgvkgqpds eaqkpgplre dseqdterlk sqreplmrar seemgrivpg lpagwvkfld
      661 ditgtyryyh sptntvqmyp pemappatpp stpptrkakp kataerereh sklkrsyssp
      721 ditqaiqeed kkripvtpav nrdnkpacyt kaeisrlsas qirnlnpvfg gsgpaltglr
      781 nlgntcymns ilqclcnaph laeyfnrnly qadinrsnfl ghkgevaeef gvimkalwag
      841 qykyispkdf kitigkindq fagysqqdsq elllflmdgl hedlnkadnr krykeenndh
      901 lddssaaeia whkhkqlnes iivalfqgqf kstvqcltch krsrtfeafm ylslplasss
      961 kctlqeclrl fskeekltdn nrfycshckt rrdslkkiei wklppvllvh lkrfsydgrw
     1021 kqklqtsvdf pletldlsqy vigpktslkr ynlfsvsnhy ggldgghyta ycknaskqrw
     1081 fkfddhevse isassvkssa ayilfytsye qraldmat
//
LOCUS       XP_041324945            1088 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324945
VERSION     XP_041324945.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469011.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1088
                     /product="ubiquitin carboxyl-terminal hydrolase 8 isoform
                     X2"
                     /calculated_mol_wt=124604
     Region          6..116
                     /region_name="USP8_dimer"
                     /note="USP8 dimerization domain; pfam08969"
                     /db_xref="CDD:462647"
     Region          197..309
                     /region_name="RHOD"
                     /note="Rhodanese Homology Domain; smart00450"
                     /db_xref="CDD:197731"
     Region          747..1076
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(751,756,1037,1055)
                     /site_type="active"
                     /db_xref="CDD:239139"
     CDS             1..1088
                     /gene="USP8"
                     /coded_by="XM_041469011.1:222..3488"
                     /db_xref="GeneID:121354403"
ORIGIN      
        1 mpavasvpke lylstslkdl nkktevkpek tstksyvqsa lkifkaaees rldgdeekay
       61 ilymkyvavy nlirkrpdfk qqqdyfhsil gptnlkkald eaeilsdslk lryeeaevrk
      121 kleerdrqel qkkqepkddg kssaknsses avdskgksqr ingetkhsle rkdqsdslsg
      181 avtperlfam msdknielli mdarkskdyq escipksisv peeaihpgdt ayliearlpe
      241 dsrdswkrrg qfhyvilldw fssaedlklg ttlqslkdal fkwesktilq neplileggy
      301 enwllcfpqy ttnarvtppq hgrteavtvs ldftypslee paplppvvae neemgdnlee
      361 rlkslnrpni qdaavpksds sfvvnpmsvt rsipevdrsk kpslkilgdn rakapstisd
      421 sqsgesgriv pdrstkpvhd grstlteeek srihaetaal leknrrekel rerlqqerke
      481 rlkrekeeqe rkekeqeqka keeqkekehk eklqqskedk eqerdeqikr eeeekeqera
      541 hreaveakkq nknepesiga krieidktsm eerekgtrtp etqkralgda sqtfvtvpgk
      601 sqreplmrar seemgrivpg lpagwvkfld ditgtyryyh sptntvqmyp pemappatpp
      661 stpptrkakp kataerereh sklkrsyssp ditqaiqeed kkripvtpav nrdnkpacyt
      721 kaeisrlsas qirnlnpvfg gsgpaltglr nlgntcymns ilqclcnaph laeyfnrnly
      781 qadinrsnfl ghkgevaeef gvimkalwag qykyispkdf kitigkindq fagysqqdsq
      841 elllflmdgl hedlnkadnr krykeenndh lddssaaeia whkhkqlnes iivalfqgqf
      901 kstvqcltch krsrtfeafm ylslplasss kctlqeclrl fskeekltdn nrfycshckt
      961 rrdslkkiei wklppvllvh lkrfsydgrw kqklqtsvdf pletldlsqy vigpktslkr
     1021 ynlfsvsnhy ggldgghyta ycknaskqrw fkfddhevse isassvkssa ayilfytsye
     1081 qraldmat
//
LOCUS       XP_041324946             340 aa            linear   VRT 06-MAY-2021
DEFINITION  inactive ubiquitin carboxyl-terminal hydrolase 50 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324946
VERSION     XP_041324946.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469012.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="inactive ubiquitin carboxyl-terminal hydrolase
                     50"
                     /calculated_mol_wt=38352
     Region          24..335
                     /region_name="UCH"
                     /note="Ubiquitin carboxyl-terminal hydrolase; pfam00443"
                     /db_xref="CDD:425685"
     Site            order(28,33,296,314)
                     /site_type="active"
                     /db_xref="CDD:239139"
     CDS             1..340
                     /gene="USP50"
                     /coded_by="XM_041469012.1:103..1125"
                     /db_xref="GeneID:121354404"
ORIGIN      
        1 mawkwryspk eeledmsslh pgltglqnle ntcymnavlq clcsltplaq yflsgkwnta
       61 lheevgesat afgclvsdmw lgefdyvspe afhsvfgkry pafsrrtqhd aqeflicvld
      121 dlheafkqps qerqsptaga strsssgtsi itqlfegqls yaircltcka ltdrpesftv
      181 lslpipstrv cslqdclecf fqpdtltrnn qihcywcgsn qdatvkasit kapqiiifhl
      241 krfawqdknr rklsttvcyp fsdldlspyi stschnntey slcavvnhag dldyghytaf
      301 ckhsvtkhwy sfddaqvtki pdsavqadta yllfyisqgy
//
LOCUS       XP_041324947             481 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324947
VERSION     XP_041324947.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469013.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X1"
                     /calculated_mol_wt=53098
     Region          <1..227
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          229..331
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          342..425
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          419..474
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..481
                     /gene="CPEB1"
                     /coded_by="XM_041469013.1:143..1588"
                     /db_xref="GeneID:121354405"
ORIGIN      
        1 mlfptstqes srglpdtndl clglqslnlt gwdrpwstqd sdtaaqtstq svlsmlsnpl
       61 gnvlgkpplg flpldpigsd lpekfstppl rnsrslldsr ssspsdsdts gfssgsdhls
      121 dlisslrisp plpflplsgv srdplkmgvg sqldqdqaal aavtsspasa skrwpgasaw
      181 pswdlldspe dpfsierear lhrqaaavne atctwsgqlp prnyknpvys ckvflggvpw
      241 diteaglint frvfgslsve wpgkdgkhpr cppkgyvylv feseksvral lqacsqdlls
      301 pdglseyyfk mssrrmrcke vqvipwvlad snfvrspsqr ldpsktvfvg alhgmlnaea
      361 laavmydlfg gvvyagidtd khkypigsgr vtfnnqrsyl kavtaafvei kttkftkkvq
      421 idpyledsmc qvcnaqpgpf fcrdqicfky fcrscwhwqh smevlrhhrp lmrnqknrds
      481 s
//
LOCUS       XP_041324948             481 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324948
VERSION     XP_041324948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X1"
                     /calculated_mol_wt=53098
     Region          <1..227
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          229..331
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          342..425
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          419..474
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..481
                     /gene="CPEB1"
                     /coded_by="XM_041469014.1:50..1495"
                     /db_xref="GeneID:121354405"
ORIGIN      
        1 mlfptstqes srglpdtndl clglqslnlt gwdrpwstqd sdtaaqtstq svlsmlsnpl
       61 gnvlgkpplg flpldpigsd lpekfstppl rnsrslldsr ssspsdsdts gfssgsdhls
      121 dlisslrisp plpflplsgv srdplkmgvg sqldqdqaal aavtsspasa skrwpgasaw
      181 pswdlldspe dpfsierear lhrqaaavne atctwsgqlp prnyknpvys ckvflggvpw
      241 diteaglint frvfgslsve wpgkdgkhpr cppkgyvylv feseksvral lqacsqdlls
      301 pdglseyyfk mssrrmrcke vqvipwvlad snfvrspsqr ldpsktvfvg alhgmlnaea
      361 laavmydlfg gvvyagidtd khkypigsgr vtfnnqrsyl kavtaafvei kttkftkkvq
      421 idpyledsmc qvcnaqpgpf fcrdqicfky fcrscwhwqh smevlrhhrp lmrnqknrds
      481 s
//
LOCUS       XP_041324949             469 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324949
VERSION     XP_041324949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469015.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..469
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X2"
                     /calculated_mol_wt=51797
     Region          <1..227
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          229..319
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          330..413
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          407..462
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..469
                     /gene="CPEB1"
                     /coded_by="XM_041469015.1:143..1552"
                     /db_xref="GeneID:121354405"
ORIGIN      
        1 mlfptstqes srglpdtndl clglqslnlt gwdrpwstqd sdtaaqtstq svlsmlsnpl
       61 gnvlgkpplg flpldpigsd lpekfstppl rnsrslldsr ssspsdsdts gfssgsdhls
      121 dlisslrisp plpflplsgv srdplkmgvg sqldqdqaal aavtsspasa skrwpgasaw
      181 pswdlldspe dpfsierear lhrqaaavne atctwsgqlp prnyknpvys ckvflggvpw
      241 diteaglint frvfgslsve wpgyvylvfe seksvrallq acsqdllspd glseyyfkms
      301 srrmrckevq vipwvladsn fvrspsqrld psktvfvgal hgmlnaeala avmydlfggv
      361 vyagidtdkh kypigsgrvt fnnqrsylka vtaafveikt tkftkkvqid pyledsmcqv
      421 cnaqpgpffc rdqicfkyfc rscwhwqhsm evlrhhrplm rnqknrdss
//
LOCUS       XP_041324950             427 aa            linear   VRT 06-MAY-2021
DEFINITION  cytoplasmic polyadenylation element-binding protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324950
VERSION     XP_041324950.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469016.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..427
                     /product="cytoplasmic polyadenylation element-binding
                     protein 1 isoform X3"
                     /calculated_mol_wt=47257
     Region          <1..173
                     /region_name="CEBP1_N"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     1 N-terminus; pfam16368"
                     /db_xref="CDD:465107"
     Region          175..277
                     /region_name="RRM1_CPEB1"
                     /note="RNA recognition motif 1 (RRM1) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12723"
                     /db_xref="CDD:410122"
     Region          288..371
                     /region_name="RRM2_CPEB1"
                     /note="RNA recognition motif 2 (RRM2) found in cytoplasmic
                     polyadenylation element-binding protein 1 (CPEB-1) and
                     similar proteins; cd12725"
                     /db_xref="CDD:410124"
     Region          365..420
                     /region_name="CEBP_ZZ"
                     /note="Cytoplasmic polyadenylation element-binding protein
                     ZZ domain; pfam16366"
                     /db_xref="CDD:465105"
     CDS             1..427
                     /gene="CPEB1"
                     /coded_by="XM_041469016.1:110..1393"
                     /db_xref="GeneID:121354405"
ORIGIN      
        1 mlsnplgnvl gkpplgflpl dpigsdlpek fstpplrnsr slldsrsssp sdsdtsgfss
       61 gsdhlsdlis slrispplpf lplsgvsrdp lkmgvgsqld qdqaalaavt sspasaskrw
      121 pgasawpswd lldspedpfs ierearlhrq aaavneatct wsgqlpprny knpvysckvf
      181 lggvpwdite aglintfrvf gslsvewpgk dgkhprcppk gyvylvfese ksvrallqac
      241 sqdllspdgl seyyfkmssr rmrckevqvi pwvladsnfv rspsqrldps ktvfvgalhg
      301 mlnaealaav mydlfggvvy agidtdkhky pigsgrvtfn nqrsylkavt aafveikttk
      361 ftkkvqidpy ledsmcqvcn aqpgpffcrd qicfkyfcrs cwhwqhsmev lrhhrplmrn
      421 qknrdss
//
LOCUS       XP_041324951            1097 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 12 member 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324951
VERSION     XP_041324951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1097
                     /product="solute carrier family 12 member 1"
                     /calculated_mol_wt=121696
     Region          101..1097
                     /region_name="2a30"
                     /note="K-Cl cotransporter; TIGR00930"
                     /db_xref="CDD:273347"
     CDS             1..1097
                     /gene="SLC12A1"
                     /coded_by="XM_041469017.1:351..3644"
                     /db_xref="GeneID:121354407"
ORIGIN      
        1 msmnnapnvf ldpnanrfqv niinedhdnn ettqedegsd pphyeetsft dethnrlris
       61 yrpgkrelyd nfrqngekte aslhpydths kmyylqtfgh ntmdpvpkid yyrntgsvsg
      121 nklnrpslle iheqlaknia vstgsverva ngestagdet avskeeenkt gfvkfgwvkg
      181 vlvrcmlniw gvmlfirlsw ivgqagiglg iivialsvvv ttltgismsa ictngvvrgg
      241 gayylisrsl gpefggsigl ifafanavav amyvvgfaet vvellkesdt lmvdesndir
      301 iigtitvvcl lgisvagmew eakaqvilli vllvaianff igtviptnte kkargffnyq
      361 asifaenfgp dfrsgegffs vfaiffpaat gilaganisg dlkdpqsaip rgtmlaivit
      421 tiayiavaic aascvvrdat gnvndtivpg mscngssacg lgydfsrcas qpcdyglmnn
      481 fqvmsmvsgf gplitagifs atlssalasl vsapkvfqal ckdnvykgle ffakgygknn
      541 epirgyvltf viamafilia elntiapiis nfflasyali nfscfhasya kspgwrpafr
      601 yynmwvslfg allccgvmfv inwwaality aielflyiyv tykkpevnwg sstqalyfvn
      661 aldsalaltt vedhvknfrp qclaltgapm vrpalldith aftknnglci ccevytgprk
      721 lcvkemnsgm ekkqawltkn krkafyaava adsfrdgvks llqasglgrm kpntlvigfk
      781 kdwrsapaaq venyvgiihd afdfelgvii irisqgfdis qvlqvqeele kleqerlale
      841 atikendfee gkrgicglfk kastlniskh etkkessint vqsmhvgefn qrlleastqf
      901 kkkqgkgtid iwwlfddggl tilipyilti rkkwkncklr iftggkvnri eeeklvmasl
      961 lskfrikfad iniicdinik pnkeswkffe emiepyrlhe sckdmttaek lkretpwkit
     1021 daeleafkek syrqvrlnel lqehsraanl ivlslpvark gavsdylyma wleilsknlp
     1081 pvlmvrgnhk nvltfys
//
LOCUS       XP_041324953             464 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324953
VERSION     XP_041324953.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469019.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="casein kinase I isoform X1"
                     /calculated_mol_wt=53052
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..426
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..464
                     /gene="CSNK1G1"
                     /coded_by="XM_041469019.1:350..1744"
                     /db_xref="GeneID:121354408"
ORIGIN      
        1 mdhpnrdkde rqrttkgmpg rsghgsrpss sassgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsaaegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqlisr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpvevlcen fpeematylr yvrrldffer
      301 pdydylrtif telfekkgyt fdyaydwvgr piptpvgsvh vdsgtsavtr dshihrdrps
      361 qqalrnqass drrgeweiqp srqtntsylt shlaadrhgg svqvvsstng elnvddptga
      421 hsnapitaqa evevveeanc lkmlnlwccc ffkrkrkkta qrhk
//
LOCUS       XP_041324954             456 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324954
VERSION     XP_041324954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469020.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="casein kinase I isoform X2"
                     /calculated_mol_wt=52063
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..426
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..456
                     /gene="CSNK1G1"
                     /coded_by="XM_041469020.1:350..1720"
                     /db_xref="GeneID:121354408"
ORIGIN      
        1 mdhpnrdkde rqrttkgmpg rsghgsrpss sassgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsaaegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqlisr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpvevlcen fpeematylr yvrrldffer
      301 pdydylrtif telfekkgyt fdyaydwvgr piptpvgsvh vdsgtsavtr dshihrdrps
      361 qqalrnqass drrgeweiqp srqtntsylt shlaadrhgg svqvvsstng elnvddptga
      421 hsnapitaqa evevveeakc ccffkrkrkk taqrhk
//
LOCUS       XP_041324955             411 aa            linear   VRT 06-MAY-2021
DEFINITION  casein kinase I isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324955
VERSION     XP_041324955.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469021.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="casein kinase I isoform X3"
                     /calculated_mol_wt=47332
     Region          42..330
                     /region_name="STKc_CK1_gamma"
                     /note="Catalytic domain of the Serine/Threonine protein
                     kinase, Casein Kinase 1 gamma; cd14126"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,123,125,163,165,167..168,
                     170,186,189,212..215)
                     /site_type="active"
                     /db_xref="CDD:271028"
     Site            order(49..55,57,70,72,117..121,165,167..168,170,186)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271028"
     Site            order(53,123,125,163,165,167,189,212..215)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271028"
     Site            185..215
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271028"
     Region          330..>368
                     /region_name="CK1gamma_C"
                     /note="Casein kinase 1 gamma C terminal; pfam12605"
                     /db_xref="CDD:463640"
     CDS             1..411
                     /gene="CSNK1G1"
                     /coded_by="XM_041469021.1:350..1585"
                     /db_xref="GeneID:121354408"
ORIGIN      
        1 mdhpnrdkde rqrttkgmpg rsghgsrpss sassgvlmvg pnfrvgkkig cgnfgelrlg
       61 knlytneyva iklepiksra pqlhleyrfy kqlgsaaegl pqvyyfgpcg kynamvlell
      121 gpsledlfdl cdrtftlktv lmiaiqlisr meyvhsknli yrdvkpenfl igrqgnkkeh
      181 vihiidfgla keyidpetkk hipyrehksl tgtarymsin thlgkeqsrr ddlealghmf
      241 myflrgslpw qglkadtlke ryqkigdtkr ntpvevlcen fpeematylr yvrrldffer
      301 pdydylrtif telfekkgyt fdyaydwvgr piptpvgsvh vdsgtsavtr dshihrdrps
      361 qqalrnqkpk kpptlstvkq vwmfpsalhr rhriaeesgr ssragrqipr t
//
LOCUS       XP_041324956             325 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354409 [Pyrgilauda ruficollis].
ACCESSION   XP_041324956
VERSION     XP_041324956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469022.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="uncharacterized protein LOC121354409"
                     /calculated_mol_wt=36418
     CDS             1..325
                     /gene="LOC121354409"
                     /coded_by="XM_041469022.1:943..1920"
                     /db_xref="GeneID:121354409"
ORIGIN      
        1 mennaavqcf iekkkiisld tsedciatle greprqrhlc reppgalpcl gspgcrplpa
       61 rsggiaqvna lrpttawlaq sgcvslspps slgtavpsst glagnllyfl fffkfffvkk
      121 pphifalfff rrvqrtiivq eglvqvsits mpwgdspplq thhcrikrtp ylrreavvgh
      181 hetafkpthl ktsrersaca rdaasgnhwq rrkrerwdvp mavsslwqeg tgphtwhvpa
      241 ggewcpscpv ptparglagg krfaegegrr rmrepralrl hrahwdkawr ersrewrrda
      301 prgswpggrl fhpgttpvsa rlrna
//
LOCUS       XP_041324957             325 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354409 [Pyrgilauda ruficollis].
ACCESSION   XP_041324957
VERSION     XP_041324957.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469023.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="uncharacterized protein LOC121354409"
                     /calculated_mol_wt=36418
     CDS             1..325
                     /gene="LOC121354409"
                     /coded_by="XM_041469023.1:920..1897"
                     /db_xref="GeneID:121354409"
ORIGIN      
        1 mennaavqcf iekkkiisld tsedciatle greprqrhlc reppgalpcl gspgcrplpa
       61 rsggiaqvna lrpttawlaq sgcvslspps slgtavpsst glagnllyfl fffkfffvkk
      121 pphifalfff rrvqrtiivq eglvqvsits mpwgdspplq thhcrikrtp ylrreavvgh
      181 hetafkpthl ktsrersaca rdaasgnhwq rrkrerwdvp mavsslwqeg tgphtwhvpa
      241 ggewcpscpv ptparglagg krfaegegrr rmrepralrl hrahwdkawr ersrewrrda
      301 prgswpggrl fhpgttpvsa rlrna
//
LOCUS       XP_041324958             660 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/nucleoside cotransporter 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041324958
VERSION     XP_041324958.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469024.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..660
                     /product="sodium/nucleoside cotransporter 1-like"
                     /calculated_mol_wt=72469
     Region          174..585
                     /region_name="nupC"
                     /note="nucleoside transporter; TIGR00804"
                     /db_xref="CDD:273278"
     CDS             1..660
                     /gene="LOC121354410"
                     /coded_by="XM_041469024.1:179..2161"
                     /db_xref="GeneID:121354410"
ORIGIN      
        1 megnqitlds ldkgtdnpaf sfegenrhye ecggrrsenq eerregkgrf ssycrkalqp
       61 askakhfcka hakvlrrvvl gllgvaylcy fiaacylnfq ralalvvita vvvfficwev
      121 fqkhcgakvl lllrpvgkcf qkswpwlkwi lwvallagli vwlvldtgkn peqlislggf
      181 sflvlflfac skhhgavswr avfwglglef llglfvlrtt pgtqafqwlg dqvqyflgyt
      241 tagssfvfgn tlieevfafq tlpiivffsc vmsilyylgv mqwlilkisw llqismgtta
      301 tetlsvagni fvgqteapll irpylmdmtl seihavmtgg fstiagsvmg ayisfgidaa
      361 sliaasvmaa pcalamaklv ypeveeskfk gkasirlsrg eeqnileaas ngaaasvglv
      421 aniaanliaf lavlefinaa lrwfgemvdi egltfqvics yvlmplaflm gadwadsplv
      481 aellgikifl nefvayqqla tykknrlmgl eewdgsrkqw iseraesitt falcgfanls
      541 sigitlggls smvpqrkgdl asvvlrallt gmcvsmlnac lagllhvpte vgdcamffst
      601 tnfsstsytm ytcckqlfas svlqngtlsf ngswaeeaes mqwlknccty ynhtscagtf
//
LOCUS       XP_041324959              94 aa            linear   VRT 06-MAY-2021
DEFINITION  CDC42 small effector protein 2-B-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324959
VERSION     XP_041324959.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469025.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..94
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..94
                     /product="CDC42 small effector protein 2-B-like isoform
                     X1"
                     /calculated_mol_wt=10264
     Region          46..84
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cl00113"
                     /db_xref="CDD:412170"
     Site            order(47,50,53,55,58,74,78)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..94
                     /gene="LOC121354411"
                     /coded_by="XM_041469025.1:371..655"
                     /db_xref="GeneID:121354411"
ORIGIN      
        1 mrthhpvrtl reqqaaarfa rsptqgdgha gcgrstkrrr rldrnmigep mnfvhtahvg
       61 ardmssdyss avsiqdhmks kggytngtsa tvei
//
LOCUS       XP_041324960              76 aa            linear   VRT 06-MAY-2021
DEFINITION  CDC42 small effector protein 2-B-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324960
VERSION     XP_041324960.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469026.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..76
                     /product="CDC42 small effector protein 2-B-like isoform
                     X2"
                     /calculated_mol_wt=8432
     Region          28..66
                     /region_name="CRIB"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cl00113"
                     /db_xref="CDD:412170"
     Site            order(29,32,35,37,40,56,60)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238077"
     CDS             1..76
                     /gene="LOC121354411"
                     /coded_by="XM_041469026.1:533..763"
                     /db_xref="GeneID:121354411"
ORIGIN      
        1 mteflvcfnw cngeqpppkr rrrldrnmig epmnfvhtah vgardmssdy ssavsiqdhm
       61 kskggytngt satvei
//
LOCUS       XP_041324961             216 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-11A [Pyrgilauda ruficollis].
ACCESSION   XP_041324961
VERSION     XP_041324961.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469027.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="ras-related protein Rab-11A"
                     /calculated_mol_wt=24295
     Region          9..173
                     /region_name="Rab11_like"
                     /note="Rab GTPase family 11 (Rab11)-like includes Rab11a,
                     Rab11b, and Rab25; cd01868"
                     /db_xref="CDD:206660"
     Site            9..13
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206660"
     Site            18..25
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206660"
     Site            order(20..26,37,40,43,69,124..125,127,154..156)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206660"
     Site            order(26..37,39..42)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206660"
     Site            order(36,41..49)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206660"
     Site            order(41,45..52,59,61)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            43
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206660"
     Site            order(44,46..48,63,65,72..73,76,80,82..85,172)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206660"
     Site            order(44..45,47,65..66,73,75,77..79)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206660"
     Site            44..48
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206660"
     Site            61..65
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206660"
     Site            66..69
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206660"
     Site            order(69,71..81)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206660"
     Site            72..77
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206660"
     Site            80..84
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206660"
     Site            89..94
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206660"
     Site            117..121
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206660"
     Site            124..127
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206660"
     Site            154..156
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206660"
     Site            170..173
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206660"
     CDS             1..216
                     /gene="RAB11A"
                     /coded_by="XM_041469027.1:115..765"
                     /db_xref="GeneID:121354413"
ORIGIN      
        1 mgtrddeydy lfkvvligds gvgksnllsr ftrnefnles kstigvefat rsiqvdgkti
       61 kaqiwdtagq eryraitsay yrgavgallv ydiakhltye nverwlkelr dhadsnivim
      121 lvgnksdlrh lravptdear afaeknglsf ietsaldstn veaafqtilt eiyrivsqkq
      181 msdrrendms psnnvvpihv ppttenkpkm qccqni
//
LOCUS       XP_041324962             643 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP6 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324962
VERSION     XP_041324962.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469028.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..643
                     /product="protein mono-ADP-ribosyltransferase PARP6
                     isoform X1"
                     /calculated_mol_wt=72370
     Region          244..370
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(246..250,253,258,262..264,279..281,297,363)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     Region          483..607
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(485..489,492,496,500..502,504,520..522,532,593)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     CDS             1..643
                     /gene="PARP6"
                     /coded_by="XM_041469028.1:1..1932"
                     /db_xref="GeneID:121354414"
ORIGIN      
        1 mcspnplpnp lphpcclppl rpqdlkgqyw tdddsdgdne seeflygvqg tcaadlyrhp
       61 qldadieavk eiysenavav reygtiddvd idlhvnisfl deevatawkv lrtepivlrl
      121 rfslsqyldg pepsievfqp snkegfglgl qlkkilgmft sqqwkhlsnd flktqqekrh
      181 swfktsgtik kfraglsifs pipkspsfpv iqdsvlkgkl gipeprvnrl mnrsvscmvk
      241 npkvevfgyp pastqagvap fnilvgghck niptleygfl vqimkyaeqr iptlneycvv
      301 cdeqhvfqng smlkpavctr elcvfsfytl gvmsgaaeev atgaevvdll vamcraales
      361 prksiifepy psvvdpndpk tlafnpkkkn yerlqkalds vmsiremtqg syleikkqmd
      421 kldplahpll qwiissnrsh ivklplsrql kfmhtshqfl llssppakea rfrtakklyg
      481 stfafhgshi enwhsilrng lvnasytklq lhgaaygkgi ylspissisf gysgmgkgqh
      541 rmpskdelvq rynrmntipq trsiqsrflq srnlncialc evitskdlqk hgniwvcpvs
      601 dhvctrfffv yedgqvgdan intqdpkiqk eimrvigtqv ytn
//
LOCUS       XP_041324963             621 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP6 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324963
VERSION     XP_041324963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469029.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..621
                     /product="protein mono-ADP-ribosyltransferase PARP6
                     isoform X2"
                     /calculated_mol_wt=69997
     Region          222..348
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(224..228,231,236,240..242,257..259,275,341)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     Region          461..585
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(463..467,470,474,478..480,482,498..500,510,571)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     CDS             1..621
                     /gene="PARP6"
                     /coded_by="XM_041469029.1:64..1929"
                     /db_xref="GeneID:121354414"
ORIGIN      
        1 mdlkgqywtd ddsdgdnese eflygvqgtc aadlyrhpql dadieavkei ysenavavre
       61 ygtiddvdid lhvnisflde evatawkvlr tepivlrlrf slsqyldgpe psievfqpsn
      121 kegfglglql kkilgmftsq qwkhlsndfl ktqqekrhsw fktsgtikkf raglsifspi
      181 pkspsfpviq dsvlkgklgi peprvnrlmn rsvscmvknp kvevfgyppa stqagvapfn
      241 ilvgghckni ptleygflvq imkyaeqrip tlneycvvcd eqhvfqngsm lkpavctrel
      301 cvfsfytlgv msgaaeevat gaevvdllva mcraalespr ksiifepyps vvdpndpktl
      361 afnpkkknye rlqkaldsvm siremtqgsy leikkqmdkl dplahpllqw iissnrshiv
      421 klplsrqlkf mhtshqflll ssppakearf rtakklygst fafhgshien whsilrnglv
      481 nasytklqlh gaaygkgiyl spissisfgy sgmgkgqhrm pskdelvqry nrmntipqtr
      541 siqsrflqsr nlncialcev itskdlqkhg niwvcpvsdh vctrfffvye dgqvgdanin
      601 tqdpkiqkei mrvigtqvyt n
//
LOCUS       XP_041324964             620 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP6 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324964
VERSION     XP_041324964.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469030.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..620
                     /product="protein mono-ADP-ribosyltransferase PARP6
                     isoform X3"
                     /calculated_mol_wt=69869
     Region          222..348
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(224..228,231,236,240..242,257..259,275,341)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     Region          460..584
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(462..466,469,473,477..479,481,497..499,509,570)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     CDS             1..620
                     /gene="PARP6"
                     /coded_by="XM_041469030.1:47..1909"
                     /db_xref="GeneID:121354414"
ORIGIN      
        1 mdlkgqywtd ddsdgdnese eflygvqgtc aadlyrhpql dadieavkei ysenavavre
       61 ygtiddvdid lhvnisflde evatawkvlr tepivlrlrf slsqyldgpe psievfqpsn
      121 kegfglglql kkilgmftsq qwkhlsndfl ktqqekrhsw fktsgtikkf raglsifspi
      181 pkspsfpviq dsvlkgklgi peprvnrlmn rsvscmvknp kvevfgyppa stqagvapfn
      241 ilvgghckni ptleygflvq imkyaeqrip tlneycvvcd eqhvfqngsm lkpavctrel
      301 cvfsfytlgv msgaaeevat gaevvdllva mcraalespr ksiifepyps vvdpndpktl
      361 afnpkkknye rlqkaldsvm siremtqgsy leikkqmdkl dplahpllqw iissnrshiv
      421 klplsrlkfm htshqfllls sppakearfr takklygstf afhgshienw hsilrnglvn
      481 asytklqlhg aaygkgiyls pissisfgys gmgkgqhrmp skdelvqryn rmntipqtrs
      541 iqsrflqsrn lncialcevi tskdlqkhgn iwvcpvsdhv ctrfffvyed gqvgdanint
      601 qdpkiqkeim rvigtqvytn
//
LOCUS       XP_041324966             612 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP6 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324966
VERSION     XP_041324966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..612
                     /product="protein mono-ADP-ribosyltransferase PARP6
                     isoform X4"
                     /calculated_mol_wt=69114
     Region          225..339
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Region          452..576
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(454..458,461,465,469..471,473,489..491,501,562)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     CDS             1..612
                     /gene="PARP6"
                     /coded_by="XM_041469032.1:47..1885"
                     /db_xref="GeneID:121354414"
ORIGIN      
        1 mdlkgqywtd ddsdgdnese eflygvqgtc aadlyrhpql dadieavkei ysenavavre
       61 ygtiddvdid lhvnisflde evatawkvlr tepivlrlrf slsqyldgpe psievfqpsn
      121 kegfglglql kkilgmftsq qwkhlsndfl ktqqekrhsw fktsgtikkf raglsifspi
      181 pkspsfpviq dsvlkgklgi peprvnrlmn rsvscmvknp kvevfgyppa stqvgghckn
      241 iptleygflv qimkyaeqri ptlneycvvc deqhvfqngs mlkpavctre lcvfsfytlg
      301 vmsgaaeeva tgaevvdllv amcraalesp rksiifepyp svvdpndpkt lafnpkkkny
      361 erlqkaldsv msiremtqgs yleikkqmdk ldplahpllq wiissnrshi vklplsrqlk
      421 fmhtshqfll lssppakear frtakklygs tfafhgshie nwhsilrngl vnasytklql
      481 hgaaygkgiy lspissisfg ysgmgkgqhr mpskdelvqr ynrmntipqt rsiqsrflqs
      541 rnlncialce vitskdlqkh gniwvcpvsd hvctrfffvy edgqvgdani ntqdpkiqke
      601 imrvigtqvy tn
//
LOCUS       XP_041324967             611 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP6 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324967
VERSION     XP_041324967.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469033.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..611
                     /product="protein mono-ADP-ribosyltransferase PARP6
                     isoform X5"
                     /calculated_mol_wt=68985
     Region          225..339
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Region          451..575
                     /region_name="ADP_ribosyl"
                     /note="ADP_ribosylating enzymes catalyze the transfer of
                     ADP_ribose from NAD+ to substrates. Bacterial toxins are
                     cytoplasmic and catalyze the transfer of a single
                     ADP_ribose unit to eukaryotic elongation factor 2, halting
                     protein synthesis and killing the cell; cd01341"
                     /db_xref="CDD:238651"
     Site            order(453..457,460,464,468..470,472,488..490,500,561)
                     /site_type="other"
                     /note="nad+ binding pocket [chemical binding]"
                     /db_xref="CDD:238651"
     CDS             1..611
                     /gene="PARP6"
                     /coded_by="XM_041469033.1:47..1882"
                     /db_xref="GeneID:121354414"
ORIGIN      
        1 mdlkgqywtd ddsdgdnese eflygvqgtc aadlyrhpql dadieavkei ysenavavre
       61 ygtiddvdid lhvnisflde evatawkvlr tepivlrlrf slsqyldgpe psievfqpsn
      121 kegfglglql kkilgmftsq qwkhlsndfl ktqqekrhsw fktsgtikkf raglsifspi
      181 pkspsfpviq dsvlkgklgi peprvnrlmn rsvscmvknp kvevfgyppa stqvgghckn
      241 iptleygflv qimkyaeqri ptlneycvvc deqhvfqngs mlkpavctre lcvfsfytlg
      301 vmsgaaeeva tgaevvdllv amcraalesp rksiifepyp svvdpndpkt lafnpkkkny
      361 erlqkaldsv msiremtqgs yleikkqmdk ldplahpllq wiissnrshi vklplsrlkf
      421 mhtshqflll ssppakearf rtakklygst fafhgshien whsilrnglv nasytklqlh
      481 gaaygkgiyl spissisfgy sgmgkgqhrm pskdelvqry nrmntipqtr siqsrflqsr
      541 nlncialcev itskdlqkhg niwvcpvsdh vctrfffvye dgqvgdanin tqdpkiqkei
      601 mrvigtqvyt n
//
LOCUS       XP_041324968             575 aa            linear   VRT 06-MAY-2021
DEFINITION  pyruvate kinase PKM isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324968
VERSION     XP_041324968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469034.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="pyruvate kinase PKM isoform X1"
                     /calculated_mol_wt=63235
     Region          86..574
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cd00288"
                     /db_xref="CDD:238178"
     Site            order(88..89,151,153,161..164,253..254,260,263..267,282,
                     290,297,308,344,362..363,367,399,401,430,432..433,487,489,
                     491,502,505..506,508,510..512)
                     /site_type="active"
                     /note="domain interfaces [active]"
                     /db_xref="CDD:238178"
     Site            order(117,119,157,288,314,316,340,372)
                     /site_type="active"
                     /db_xref="CDD:238178"
     CDS             1..575
                     /gene="PKM"
                     /coded_by="XM_041469034.1:43..1770"
                     /db_xref="GeneID:121354415"
ORIGIN      
        1 mgvwdtfwll rlcsrpwtss kgrlamkrsy egniciegrh rnraimskhh dagtafiqtq
       61 qlhaamadtf lehmcrldid septiarntg iictigpasr sveklkemik sgmnvarlnf
      121 shgtheyheg tiknvreate sfasdpityr pvaialdtkg peirtglikg sgtaevelkk
      181 gaqlkvtldd sfmencdent lwldyknltk vvevgskiyv ddglislvvr ekgkdyvmte
      241 ienggmlgsk kgvnlpgaav dlpavsekdi qdlkfgveqn vdmvfasfir kaadvhavrk
      301 vlgekgknik iiskienheg vrrfdeimea sdgimvargd lgieipaekv flaqkmmigr
      361 cnragkpiic atqmlesmik kprptraegs dvanavldga dcimlsgeta kgdypleavr
      421 mqhaiareae aamfhrqlfe eilrlnvnnr dpadamaaga veasfkclaa allvltesgr
      481 sahlvsryrp rapiiaitrn eqtarqahly rgifpvlckd paqdawaedv dlrvtlgmnv
      541 gkargffksg dlvivltgwr pgsgytntmr vvpvp
//
LOCUS       XP_041324969             575 aa            linear   VRT 06-MAY-2021
DEFINITION  pyruvate kinase PKM isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324969
VERSION     XP_041324969.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469035.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="pyruvate kinase PKM isoform X2"
                     /calculated_mol_wt=63194
     Region          86..574
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cd00288"
                     /db_xref="CDD:238178"
     Site            order(88..89,151,153,161..164,253..254,260,263..267,282,
                     290,297,308,344,362..363,367,399,401,430,432..433,487,489,
                     491,502,505..506,508,510..512)
                     /site_type="active"
                     /note="domain interfaces [active]"
                     /db_xref="CDD:238178"
     Site            order(117,119,157,288,314,316,340,372)
                     /site_type="active"
                     /db_xref="CDD:238178"
     CDS             1..575
                     /gene="PKM"
                     /coded_by="XM_041469035.1:58..1785"
                     /db_xref="GeneID:121354415"
ORIGIN      
        1 mgvwdtfwll rlcsrpwtss kgrlamkrsy egniciegrh rnraimskhh dagtafiqtq
       61 qlhaamadtf lehmcrldid septiarntg iictigpasr sveklkemik sgmnvarlnf
      121 shgtheyheg tiknvreate sfasdpityr pvaialdtkg peirtglikg sgtaevelkk
      181 gaqlkvtldd sfmencdent lwldyknltk vvevgskiyv ddglislvvr ekgkdyvmte
      241 ienggmlgsk kgvnlpgaav dlpavsekdi qdlkfgveqn vdmvfasfir kaadvhavrk
      301 vlgekgknik iiskienheg vrrfdeimea sdgimvargd lgieipaekv flaqkmmigr
      361 cnragkpiic atqmlesmik kprptraegs dvanavldga dcimlsgeta kgdypleavr
      421 mqhaiareae aaifhrqlfe elrrltplnc dpteaaavga veasfkccsg aiivltksgr
      481 sahlvsryrp rapiiaitrn eqtarqahly rgifpvlckd paqdawaedv dlrvtlgmnv
      541 gkargffksg dlvivltgwr pgsgytntmr vvpvp
//
LOCUS       XP_041324970             530 aa            linear   VRT 06-MAY-2021
DEFINITION  pyruvate kinase PKM isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041324970
VERSION     XP_041324970.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469036.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..530
                     /product="pyruvate kinase PKM isoform X3"
                     /calculated_mol_wt=57900
     Region          41..529
                     /region_name="Pyruvate_Kinase"
                     /note="Pyruvate kinase (PK): Large allosteric enzyme that
                     regulates glycolysis through binding of the substrate,
                     phosphoenolpyruvate, and one or more allosteric effectors.
                     Like other allosteric enzymes, PK has a high substrate
                     affinity R state and a low...; cd00288"
                     /db_xref="CDD:238178"
     Site            order(43..44,106,108,116..119,208..209,215,218..222,237,
                     245,252,263,299,317..318,322,354,356,385,387..388,442,444,
                     446,457,460..461,463,465..467)
                     /site_type="active"
                     /note="domain interfaces [active]"
                     /db_xref="CDD:238178"
     Site            order(72,74,112,243,269,271,295,327)
                     /site_type="active"
                     /db_xref="CDD:238178"
     CDS             1..530
                     /gene="PKM"
                     /coded_by="XM_041469036.1:175..1767"
                     /db_xref="GeneID:121354415"
ORIGIN      
        1 mskhhdagta fiqtqqlhaa madtflehmc rldidsepti arntgiicti gpasrsvekl
       61 kemiksgmnv arlnfshgth eyhegtiknv reatesfasd pityrpvaia ldtkgpeirt
      121 glikgsgtae velkkgaqlk vtlddsfmen cdentlwldy knltkvvevg skiyvddgli
      181 slvvrekgkd yvmteiengg mlgskkgvnl pgaavdlpav sekdiqdlkf gveqnvdmvf
      241 asfirkaadv havrkvlgek gknikiiski enhegvrrfd eimeasdgim vargdlgiei
      301 paekvflaqk mmigrcnrag kpiicatqml esmikkprpt raegsdvana vldgadciml
      361 sgetakgdyp leavrmqhai areaeaamfh rqlfeeilrl nvnnrdpada maagaveasf
      421 kclaaallvl tesgrsahlv sryrprapii aitrneqtar qahlyrgifp vlckdpaqda
      481 waedvdlrvt lgmnvgkarg ffksgdlviv ltgwrpgsgy tntmrvvpvp
//
LOCUS       XP_041324971             446 aa            linear   VRT 06-MAY-2021
DEFINITION  CUGBP Elav-like family member 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324971
VERSION     XP_041324971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="CUGBP Elav-like family member 6"
                     /calculated_mol_wt=48152
     Region          2..88
                     /region_name="RRM1_CELF3_4_5_6"
                     /note="RNA recognition motif 1 (RRM1) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12632"
                     /db_xref="CDD:410041"
     Site            order(8,10,12..13,16,35,37,39,48..50,52,82,84)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410041"
     Region          94..174
                     /region_name="RRM2_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12635"
                     /db_xref="CDD:410043"
     Site            order(96,98,100..101,104,123,125,127,135..137,139,169,171)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:410043"
     Region          272..>436
                     /region_name="half-pint"
                     /note="poly-U binding splicing factor, half-pint family;
                     TIGR01645"
                     /db_xref="CDD:130706"
     Region          357..435
                     /region_name="RRM3_CELF3_4_5_6"
                     /note="RNA recognition motif 2 (RRM2) found in CUGBP
                     Elav-like family member CELF-3, CELF-4, CELF-5, CELF-6 and
                     similar proteins; cd12639"
                     /db_xref="CDD:241083"
     CDS             1..446
                     /gene="CELF6"
                     /coded_by="XM_041469037.1:76..1416"
                     /db_xref="GeneID:121354416"
ORIGIN      
        1 mkdhdaiklf vgqiprnlee sdlkplfeef griyeltvlk drftgmhkgc afltycards
       61 alkaqsalhe qktlpgmnrp iqvkpadseg rgedrklfvg mlgkqqsedd vrrlfepfgq
      121 ieectilrgp dgaskgcafv kygshaeaqa ainslhgsqt mpgassslvv kfadtdkert
      181 lrrmhqmagq lgifnpmtiq fgaygaytqa imqqqaalma aaqgtclnpm aaiaaaqmqq
      241 maafnvsglv aapltpssgt stppgistap vpsiatpigv ngfsplppqt ngqpasetiy
      301 tngihpypaq sptvadplqq ayagmqhyaa ayptayapis qafpqqapli pqqqregpeg
      361 cnlfiyhlpq efgdaeltqm flpfgnvisa kvfvdratnq skcfgfvsfd nptsaqaaiq
      421 amngfqigmk rlkvqlkrpk danrpy
//
LOCUS       XP_041324972            2864 aa            linear   VRT 06-MAY-2021
DEFINITION  fibrillin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324972
VERSION     XP_041324972.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469038.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2864
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2864
                     /product="fibrillin-1"
                     /calculated_mol_wt=311293
     Region          49..83
                     /region_name="Fibrillin_U_N"
                     /note="Fibrillin 1 unique N-terminal domain; pfam18193"
                     /db_xref="CDD:436338"
     Region          195..>228
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          247..>277
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          344..390
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          484..518
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(484,487,500)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          524..565
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(524,527,542)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          566..606
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(566,569,583)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          607..640
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(607,610,624)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          662..705
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          717..758
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(717,720,735)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          759..800
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(759,762,777)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          801..>828
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          854..>886
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          960..1001
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1063..1097
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          1106..1142
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1106,1109,1124)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1148..1181
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          1194..1229
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          1319..1354
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1360..1395
                     /region_name="EGF_3"
                     /note="EGF domain; pfam12947"
                     /db_xref="CDD:463759"
     Region          1439..1479
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1439,1442,1456)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1480..1511
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1480,1483,1497)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1542..1582
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1599..1631
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1599,1602,1617)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1641..1680
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1641,1644,1658)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1698..1741
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          1759..1789
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Site            order(1759,1762,1777)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1801..1833
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1801,1804,1819)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1923..1965
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(1923,1926,1942)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          1966..2001
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(1966,1969,1984)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2006..2047
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          2061..2104
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          2120..2158
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2120,2123,2137)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2159..2198
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2159,2162,2176)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2284..2316
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2284,2287,2302)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <2350..2383
                     /region_name="TB"
                     /note="TB domain; pfam00683"
                     /db_xref="CDD:459903"
     Region          <2432..2475
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Region          2478..2507
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF domain; pfam07645"
                     /db_xref="CDD:429571"
     Region          2517..2559
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Region          2560..>2589
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2560,2563,2576)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          2600..2631
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(2600,2603,2617)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     CDS             1..2864
                     /gene="FBN1"
                     /coded_by="XM_041469038.1:166..8760"
                     /db_xref="GeneID:121354417"
ORIGIN      
        1 mwrgrllgia lgvavlwasq agaaaaghte gvsakesrss rakrrghggg hdalkgpnvc
       61 gsrynayccp gwktlpggnq civpicrhsc gdgfcsrpnm ctcpngqiap scgsksiqhc
      121 nircmnggsc sddhclcqkg ytgthcgqpv cengclnggr cvapnrcact ygftgpqcer
      181 dyrtgpcftl vtnqmcqgql sgivctktlc catvgrawgh pcemcpaqph pcrrgfipni
      241 rtgacqdvde cqaipgicqg gncintvgsf eckcpaghkf nevtqkcddi decstipgic
      301 dggecsntvs syfckcppgf ytapdglkci dvrpgfcyst lsngrcgsql pqplskmqcc
      361 cdsgrcwssa patapemcpi rstdeyrklc tvaamlparp dlpparpdii ppplipdvyp
      421 pphpeiiyps rappvhpilp vnltdycqtf rhlcrngrci ptpgsyrcec nkgfqlhgre
      481 ecldidecer npciggdcvn tqgsyicqcr vgyqstatrt ecrdideclq ngricnngrc
      541 intdgsfhcv cnagfqvavd gkncedmdec sirniclngm cinedgsfkc ickpgfqlas
      601 dgryctdine cetdgicmng rcvntdgsfr cecfpglavg ldgrvcvdth mrstcyggyk
      661 rgqcvrpltg avtkseccca stdyafgepc qpcpaqnsae yqalcssgtg mtaggndine
      721 clldpdlcpn grcenlhgty kcycdpgyev dstgkncidi decalnmllc dngqcrntpg
      781 sftctcpkgf vytpdlktce didecesnpc vngvckntpg sfvcecspes tldptrtici
      841 etvkgtcwqn ivngrceini ngatlksqcc sslgaawgsp ctpcerdpic qkgysrirgt
      901 lcedvnecev fpgvctngqc vntlgsfvcq cpngmtldas grtcldirle scylqhedeq
      961 ctsqipgrhr mdacccsvga awgyeceecp lrgtpefeal cprgpgfstk ieisgkpfsk
     1021 dineckmfps lcthgkcrnt igsfkcrcds gfaldseern ctdidecris pdlcgqgicv
     1081 ntpgdfecec fegyesgfmm mkncmdidec qrnpllcrgg tcintegsfr cdcppghqis
     1141 pnisacvdin ecelssnlcr ngrcvnligk yqcacnpgyq stqdklycid idecqimngg
     1201 cedfctnseg syecsckqgf almpdhrtct didecednpn icdggqctni pgeyrclcyd
     1261 gfmasedmkt cidvnecdlh pniclsgtce ntkgsfichc dmgysgkkgt tgctdinece
     1321 igahncdrha ictntagsfk cscspgwigd gikctdldec sngthmcsph adckntmgsy
     1381 rclckegytg dgftctdlde csenlnlcen gqclnapggy rcecdmgflp svdgkacedi
     1441 decslpnicv ygtchnlpgl frcecevgye ldrsggnctd vnecadpttc isgtcintag
     1501 sytcecppdf elnptrvgcv dtrsgncyld iktrgdnggt fcsneigvgv skascccslg
     1561 kawgvpcehc plvntteykv lcpggegfrp npitviledi decqelpglc qggkcintfg
     1621 sfqcqcpsgy ylneetrvcd dvnecetpgi cgpgtcyntv gnytcicppd ymqvnggnnc
     1681 mdmrrslcyr nyyadnqtcd gellfnmtkk mcccsynigr awnkpceqcp ipstdefstl
     1741 cgsqrpgffi diytglpvdi decreipgvc engicinmvg sfrcecpvgf fyndkllice
     1801 didecqngpv cqqnaecvnt agsyrcdckp gyrftstgrc tdrnecqeip nicshgqcid
     1861 tvgsfycich ngfktnddrt mcidinecer dacgngtcrn tigsfncrcn lgfilshnnd
     1921 cidvdecasg ngmlcrngqc vntigsfqcl cndgyevald grtcvdinec alepgkcspg
     1981 tcqnldgsfr cicppgyilq ndkcedidec veqpeicalg tcsntpgsfk clcpegfvls
     2041 stgrrcqdlr vsycftkfed gkcsvpksrn hskqecccal kgqgwgdpce lcpeeadeaf
     2101 rqicpfgigi lvgpgdarld vdecldpdnc kfgqcintdg sfrcecpygy ilqgaecvdt
     2161 decavgnpcg ngtcrnvigg fectcvegfe pgpmmtcedv neciqnpllc afrcvntfgs
     2221 yeckcpggyv lredrrmcrd qneceegihd cdskqmeckn ligtymcicg pgyqrrpdge
     2281 gcidenecqt kpglcengrc vntvgsyrce cnegftvsdt qdecldnreg ycftevlqsm
     2341 cqigssnrna vtksecccdg grgwgqncev cpfpgtvafk klcphgrgyt ssgadideck
     2401 vihdvcrnge cinergtyhc lcnlgyttdv tgtlcvdlne cnespkpcnf ickntegsyq
     2461 cscpkgyilq edgrsckdld ecatkqhncq flcvntiggf tckcppgftq hhtacidnne
     2521 cateislcga kgicqntpgs fvcecqrgfs ldqtgqsced vdecdgnhrc qhgcqniigg
     2581 yrcscpqgyl qhyqwnqcvd eneclsahic ggaschntlg sykcmcptgf qyeqfsggcq
     2641 dinecgsaqa pcsygcsnte ggyvcgcppg yfrigqghcv sgvglgrgqg qelslsgevd
     2701 dnslspeacy eckingypkr grkrrstnet aseaedqqeq elpislaswd iekaavfsin
     2761 isdlsnkdri lellpalttl tnhnrylids gnedgffrin kkdgisylhf tkkkpvpgny
     2821 slqissiply kkkelnqlea khdkdylsge lgdnlkmkiq illh
//
LOCUS       XP_041324973             502 aa            linear   VRT 06-MAY-2021
DEFINITION  CHRNA7-FAM7A fusion protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324973
VERSION     XP_041324973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="CHRNA7-FAM7A fusion protein"
                     /calculated_mol_wt=56710
     Region          8..490
                     /region_name="LIC"
                     /note="Cation transporter family protein; TIGR00860"
                     /db_xref="CDD:273305"
     CDS             1..502
                     /gene="CHRFAM7A"
                     /coded_by="XM_041469039.1:174..1682"
                     /db_xref="GeneID:121354418"
ORIGIN      
        1 mglqelavwl laaaglvres lqgefqrkly kellknynpl erpvandsqp ltvyftlslm
       61 qimdvdeknq vlttniwlqm ywtdhylqwn vseypgvknv rfpdgliwkp dillynsade
      121 rfdatfhtnv lvnssghcqy lppgifkssc yidvrwfpfd vqkcnlkfgs wtyggwsldl
      181 qmqeadisgy isngewdlvg vpgkrtesfy ecckepypdv tftvtmrrrt lyyglnllip
      241 cvlisalall vfllpadsge kislgitvll sltvfmllva eimpatsdsv pliaqyfast
      301 miivglsvvv tvivlqyhhh dpdggkmpkw triillnwca wflrmkrpge dkvrpacqhk
      361 qrrcslssve mntvsgqqss ngnmlyigfr glegvhctpt tdsgvicgrm tcsptdeenl
      421 lhsghpsegd pdlakileev ryianrfrdq deeeaicnew kfaasvvdrl clmafsvfti
      481 ictigilmsa pnfveavskd fa
//
LOCUS       XP_041324974             511 aa            linear   VRT 06-MAY-2021
DEFINITION  gliomedin [Pyrgilauda ruficollis].
ACCESSION   XP_041324974
VERSION     XP_041324974.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469040.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="gliomedin"
                     /calculated_mol_wt=54938
     Region          128..182
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          270..509
                     /region_name="OLF"
                     /note="Olfactomedin-like domain; pfam02191"
                     /db_xref="CDD:460482"
     CDS             1..511
                     /gene="GLDN"
                     /coded_by="XM_041469040.1:1..1536"
                     /db_xref="GeneID:121354420"
ORIGIN      
        1 meaaggrall aavgllsals aagtlfllaq wrelgaalre leaagngsvr glpaapapaa
       61 rtkrsrrger arghvraesd emlmmltysm vpvrvmvdlc nstkgicltg ppgppgppgl
      121 pgyngsdgip gtpgqkgepg vngkrgkigl pgpkgdqgqk gepgemglpg kdgipggkgt
      181 rgskrkkgdg nndvilegak gepgppgppg ppgppgpphk rkgkakvele eniysskctd
      241 evcdvpnddt lagkaedrtp gpsrkaecvi tsvgspirfv svqqtfgtwm repanisder
      301 iwltmhfsgn yikeyensna llnnsyriin itglfygcgh avqnnhlyyh eggtnsirkf
      361 gldkdslhtl hikkalhqgr nylfsnskty fniavdekgl wiiyasstde nimvanvdee
      421 rfsvnwhint typkskagna fiacgilyvt dtkdmtvsfa fdllkgkqid arfklrssqs
      481 vlamlsyslr dknlytweng slmvypvhfg r
//
LOCUS       XP_041324975             174 aa            linear   VRT 06-MAY-2021
DEFINITION  methylmalonyl-CoA epimerase, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041324975
VERSION     XP_041324975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="methylmalonyl-CoA epimerase, mitochondrial"
                     /calculated_mol_wt=18814
     Region          45..173
                     /region_name="metmalonyl_epim"
                     /note="methylmalonyl-CoA epimerase; TIGR03081"
                     /db_xref="CDD:213772"
     Site            order(46,49,51,58,62..63,65,67..70,91..92,94,115..116,118,
                     120..121,123,138,140,159,166..167)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:319912"
     Site            order(48,84,95,106,120,156,158,170,172)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:319912"
     CDS             1..174
                     /gene="MCEE"
                     /coded_by="XM_041469041.1:194..718"
                     /db_xref="GeneID:121354421"
ORIGIN      
        1 maavlrrgaa gllsrlqtsa ptvrtlsssk sfsqnipscl wklgrlnhva iavpdlekaq
       61 slykdvlgaq vsetvalpeh gvytvfvelg ntklellhpl gekspiasfl qknktggmhh
      121 icievddika amtelkkkki rilseepkig ahgkpviflh pkdchgvlve leqa
//
LOCUS       XP_041324977            1057 aa            linear   VRT 06-MAY-2021
DEFINITION  DIS3-like exonuclease 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324977
VERSION     XP_041324977.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469043.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1057
                     /product="DIS3-like exonuclease 1 isoform X1"
                     /calculated_mol_wt=119876
     Region          14..190
                     /region_name="PIN_Rrp44-like"
                     /note="VapC-like PIN domain of yeast exosome subunit Rrp44
                     endoribonuclease and other eukaryotic homologs; cd09862"
                     /db_xref="CDD:350211"
     Site            order(21..25,27,29,90,94..95,102,106,120,123)
                     /site_type="other"
                     /note="exosome subunit interface [polypeptide binding]"
                     /db_xref="CDD:350211"
     Site            order(32,37,40,155)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:350211"
     Region          274..912
                     /region_name="VacB"
                     /note="Exoribonuclease R [Transcription]; COG0557"
                     /db_xref="CDD:440323"
     Region          877..957
                     /region_name="Rrp44_S1"
                     /note="S1 domain; pfam17215"
                     /db_xref="CDD:435792"
     CDS             1..1057
                     /gene="DIS3L"
                     /coded_by="XM_041469043.1:57..3230"
                     /db_xref="GeneID:121354422"
ORIGIN      
        1 mlrtekvlql rgqqgravrv vrehylrpdv pcrsalcrsa qcraacardg kllsddvthy
       61 vvpdckvvqe yleilefpel kgiifmqtac qavqhqkgrr qynklrnllk dprhdctvfa
      121 nefhqhcylp rekgesmekw qtrniynaaa wyhnhclgqm pvvmvteded airqygnete
      181 gvfvisfkny ldnfwpdlka ahelfdsivq arreresesq enhgkeypeh lpvevleagi
      241 ksgrylqgal nvnkhraqle afvrlqgfgs kdtelqsdil iygtkarnra ihgdvvvvel
      301 lpvhewkgrt valceneaed kapadttgdp mptgkvvgii qknwrdyvvt fpskeesqsq
      361 grnaqkvlvt pwdyripkir istqqaealq eyrvvvrids westslypng hfvrvlgrig
      421 dlegeiaail vensicaapf seiqmsempv sspknpwkvs peeakkrldl rdthlifsid
      481 pkgcedvdda lsvrtlpngn lelgvhiadv thfvaansyt dveararatt yyladrrydm
      541 lppvlsadlc sllsgvdrya vsvlweleke syetlrvqyt ktlicsaykl eyetaqglld
      601 gdtsvvgdil elkgldegtr qkklaelvwa iskltdiarh vrakrdrcga lelegieirv
      661 qlddkrnihd lipkqplevh etvaecmila nhwvakrise dfphqallrq hppprqefft
      721 elrecasakg fsidtrsnka laesldrand psdpivnkll rsmathamsn alyfstgscp
      781 eeqfhhygla lekythftsp irryadivvh rllmaatlrg ttgdvkdnii snkdleelcr
      841 hinnrnraaq raqkqstelf qcmyfrdrst esdercvadg viysirtngv lvfvprygik
      901 gaaymknkeg lviscqgags cqwkpgslhr sqhkitsttt tgdsmtlslf dhitvgilvq
      961 ssrchaetir leiirnaphh tadteaaqrs fhavksdlvk evsqsaeeaq raqerarvev
     1021 mdeesrefcq tkgpslyqll eeirelalld vtedvrt
//
LOCUS       XP_041324978             685 aa            linear   VRT 06-MAY-2021
DEFINITION  DIS3-like exonuclease 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041324978
VERSION     XP_041324978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..685
                     /product="DIS3-like exonuclease 1 isoform X2"
                     /calculated_mol_wt=77216
     Region          <22..540
                     /region_name="VacB"
                     /note="Exoribonuclease R [Transcription]; COG0557"
                     /db_xref="CDD:440323"
     Region          505..585
                     /region_name="Rrp44_S1"
                     /note="S1 domain; pfam17215"
                     /db_xref="CDD:435792"
     CDS             1..685
                     /gene="DIS3L"
                     /coded_by="XM_041469044.1:1..2058"
                     /db_xref="GeneID:121354422"
ORIGIN      
        1 mrlrtkhlqt prvtlcpqey rvvvridswe stslypnghf vrvlgrigdl egeiaailve
       61 nsicaapfse iqmsempvss pknpwkvspe eakkrldlrd thlifsidpk gcedvddals
      121 vrtlpngnle lgvhiadvth fvaansytdv eararattyy ladrrydmlp pvlsadlcsl
      181 lsgvdryavs vlwelekesy etlrvqytkt licsaykley etaqglldgd tsvvgdilel
      241 kgldegtrqk klaelvwais kltdiarhvr akrdrcgale legieirvql ddkrnihdli
      301 pkqplevhet vaecmilanh wvakrisedf phqallrqhp pprqefftel recasakgfs
      361 idtrsnkala esldrandps dpivnkllrs mathamsnal yfstgscpee qfhhyglale
      421 kythftspir ryadivvhrl lmaatlrgtt gdvkdniisn kdleelcrhi nnrnraaqra
      481 qkqstelfqc myfrdrstes dercvadgvi ysirtngvlv fvprygikga aymknkeglv
      541 iscqgagscq wkpgslhrsq hkitsttttg dsmtlslfdh itvgilvqss rchaetirle
      601 iirnaphhta dteaaqrsfh avksdlvkev sqsaeeaqra qerarvevmd eesrefcqtk
      661 gpslyqllee irelalldvt edvrt
//
LOCUS       XP_041324979             277 aa            linear   VRT 06-MAY-2021
DEFINITION  TIMELESS-interacting protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324979
VERSION     XP_041324979.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469045.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="TIMELESS-interacting protein"
                     /calculated_mol_wt=31014
     Region          71..153
                     /region_name="Swi3"
                     /note="Replication Fork Protection Component Swi3;
                     pfam07962"
                     /db_xref="CDD:462324"
     CDS             1..277
                     /gene="TIPIN"
                     /coded_by="XM_041469045.1:573..1406"
                     /db_xref="GeneID:121354423"
ORIGIN      
        1 mldplennlf dlpdyented etfpplpppa spgrddaewa qangdpdgnq qsqtkdsavt
       61 tqkavkrprp rldaqrltse rglpalrhmf dnvkfkgkgh eaedlktlih hmehwahrlf
      121 pqlqfedfid vveslgnkke vqtclkrirl dlpilhedfk nneegesngl daaaedahsh
      181 cgsaeelnsq pgpslteeqq ermkknrqla lerrqarlqg lsqsqhqelp ssyseegfds
      241 paaqdppdlt edtevpaakd aptedgddel gcareeq
//
LOCUS       XP_041324980             277 aa            linear   VRT 06-MAY-2021
DEFINITION  TIMELESS-interacting protein [Pyrgilauda ruficollis].
ACCESSION   XP_041324980
VERSION     XP_041324980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="TIMELESS-interacting protein"
                     /calculated_mol_wt=31014
     Region          71..153
                     /region_name="Swi3"
                     /note="Replication Fork Protection Component Swi3;
                     pfam07962"
                     /db_xref="CDD:462324"
     CDS             1..277
                     /gene="TIPIN"
                     /coded_by="XM_041469046.1:569..1402"
                     /db_xref="GeneID:121354423"
ORIGIN      
        1 mldplennlf dlpdyented etfpplpppa spgrddaewa qangdpdgnq qsqtkdsavt
       61 tqkavkrprp rldaqrltse rglpalrhmf dnvkfkgkgh eaedlktlih hmehwahrlf
      121 pqlqfedfid vveslgnkke vqtclkrirl dlpilhedfk nneegesngl daaaedahsh
      181 cgsaeelnsq pgpslteeqq ermkknrqla lerrqarlqg lsqsqhqelp ssyseegfds
      241 paaqdppdlt edtevpaakd aptedgddel gcareeq
//
LOCUS       XP_041324981             450 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324981
VERSION     XP_041324981.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469047.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="COP9 signalosome complex subunit 2 isoform X1"
                     /calculated_mol_wt=52274
     Region          40..441
                     /region_name="RPN6"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5159"
                     /db_xref="CDD:227488"
     Region          316..420
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..450
                     /gene="COPS2"
                     /coded_by="XM_041469047.1:168..1520"
                     /db_xref="GeneID:121354424"
ORIGIN      
        1 msdmeddfmc ddeedydley sedsnsepnv dlenqyynsk alkeddpkaa lssfqkvlel
       61 egekgewgfk alkqmikinf kltnfpemmn rykqlltyir savtrnysek sinsildyis
      121 tskqnsdflc qmdllqefye ttlealkdak ndrlwfktnt klgklylere eygklqkilr
      181 qlhqscqtdd geddlkkgtq lleiyaleiq mytaqknnkk lkalyeqslh iksaiphpli
      241 mgvirecggk mhlregefek ahtdffeafk nydesgsprr ttclkylvla nmlmksginp
      301 fdsqeakpyk ndpeilamtn lvsayqnndi tefekilktn hsnimddpfi rehieellrn
      361 irtqvlikli kpytrihipf iskelnidva dvesllvqci ldntihgrid qvnqlleldh
      421 qkrggaryta ldkwtnqlns lnqavvskla
//
LOCUS       XP_041324982             443 aa            linear   VRT 06-MAY-2021
DEFINITION  COP9 signalosome complex subunit 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324982
VERSION     XP_041324982.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469048.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..443
                     /product="COP9 signalosome complex subunit 2 isoform X2"
                     /calculated_mol_wt=51466
     Region          40..434
                     /region_name="RPN6"
                     /note="26S proteasome regulatory complex component
                     [Posttranslational modification, protein turnover,
                     chaperones]; COG5159"
                     /db_xref="CDD:227488"
     Region          309..413
                     /region_name="PCI"
                     /note="PCI domain; pfam01399"
                     /db_xref="CDD:460195"
     CDS             1..443
                     /gene="COPS2"
                     /coded_by="XM_041469048.1:166..1497"
                     /db_xref="GeneID:121354424"
ORIGIN      
        1 msdmeddfmc ddeedydley sedsnsepnv dlenqyynsk alkeddpkaa lssfqkvlel
       61 egekgewgfk alkqmikinf kltnfpemmn rykqlltyir savtrnysek sinsildyis
      121 tskqmdllqe fyettlealk dakndrlwfk tntklgklyl ereeygklqk ilrqlhqscq
      181 tddgeddlkk gtqlleiyal eiqmytaqkn nkklkalyeq slhiksaiph plimgvirec
      241 ggkmhlrege fekahtdffe afknydesgs prrttclkyl vlanmlmksg inpfdsqeak
      301 pykndpeila mtnlvsayqn nditefekil ktnhsnimdd pfirehieel lrnirtqvli
      361 klikpytrih ipfiskelni dvadvesllv qcildntihg ridqvnqlle ldhqkrggar
      421 ytaldkwtnq lnslnqavvs kla
//
LOCUS       XP_041324983            1049 aa            linear   VRT 06-MAY-2021
DEFINITION  multiple epidermal growth factor-like domains protein 11 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324983
VERSION     XP_041324983.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469049.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1049
                     /product="multiple epidermal growth factor-like domains
                     protein 11 isoform X1"
                     /calculated_mol_wt=113610
     Region          31..100
                     /region_name="EMI"
                     /note="EMI domain; pfam07546"
                     /db_xref="CDD:462204"
     CDS             1..1049
                     /gene="MEGF11"
                     /coded_by="XM_041469049.1:1..3150"
                     /db_xref="GeneID:121354425"
ORIGIN      
        1 mvahvlfqwi lrgliltfll kttlslnpdd pnvcshwesy avtvqesyah pfdqiyytrc
       61 tdilnwfkct rhrisyktay rrglrtmyrr rsqccpgyye sgdyciplct eecvhgrcvs
      121 pdtchcepgw ggtdcssgcd sehwgphcsn rcqcqnealc npitgacvca dgfrgwrcee
      181 lcepgtygkg chfqcqchhg atcdhqtgec hcapgytgvf ceelcppgsh gaqcelrcpc
      241 qnggvchhit gecscpagwm glvcaqpcpp gtfgincsqd cpchngghcd pvtgkclcta
      301 gyigdrcqee cpigtygfqc aqtcacqnga kcyhvngaci cdpgfkgihc qermcpegfy
      361 glkcnkkcpc nitntlschp lsgecsckag waglycnetc pvgyygegcq vpcpchngad
      421 cdsitgscic apgfmgddct ipcmagtygt ncssvcnckn ngtcspvdgl cyckegwqgv
      481 dcsipcssgs wglncnqtcs csngascrpa dgfclcspgw qgefcdqpcp dgtyglncse
      541 rcdcnhadgc dpvtgycccl agwtgihcdn ictqgrwgpn csiscsceng gscspedgtc
      601 dcapgyrgpl cqricppgfy ghhcsqpcpq cvhsngpchh vsghcdclpg fsgplcnqvc
      661 psgkfgkdca evcqctengt cnpidgscqc fpgwigmdcs qtcpagfwgp dcfhscnchn
      721 galcspydge crcthgwtgl yctqrcpaaf ygkncanvcq cqngadcdhi tgqctcrtgf
      781 tgkqceqkcs pgtfgygckq lcecmnnatc dhvtgtcycs pgfkgircdq aalmmeelnp
      841 ytkispalgs erhsvgaiig iiillliimv llalfvwyrr kqkekghdmp svsytpamrm
      901 tntdyslsga cgmdrrqnty imeksfkdym kesvcssstc slnssenpya tikdppiltc
      961 khsessyvem kspghrespy semptsstan kniyeveptv sivqdtrsrs asylqnpydl
     1021 prnshipghy dllpvrhspt hgpswdkqs
//
LOCUS       XP_041324984            1025 aa            linear   VRT 06-MAY-2021
DEFINITION  multiple epidermal growth factor-like domains protein 11 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041324984
VERSION     XP_041324984.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469050.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1025
                     /product="multiple epidermal growth factor-like domains
                     protein 11 isoform X2"
                     /calculated_mol_wt=110259
     CDS             1..1025
                     /gene="MEGF11"
                     /coded_by="XM_041469050.1:250..3327"
                     /db_xref="GeneID:121354425"
ORIGIN      
        1 myrrrsqccp gyyesgdyci plcteecvhg rcvspdtchc epgwggtdcs sgcdsehwgp
       61 hcsnrcqcqn ealcnpitga cvcadgfrgw rceelcepgt ygkgchfqcq chhgatcdhq
      121 tgechcapgy tgvfceelcp pgshgaqcel rcpcqnggvc hhitgecscp agwmglvcaq
      181 pcppgtfgin csqdcpchng ghcdpvtgkc lctagyigdr cqeecpigty gfqcaqtcac
      241 qngakcyhvn gacicdpgfk gihcqermcp egfyglkcnk kcpcnitntl schplsgecs
      301 ckagwaglyc netcpvgyyg egcqvpcpch ngadcdsitg scicapgfmg ddctipcmag
      361 tygtncssvc ncknngtcsp vdglcyckeg wqgvdcsipc ssgswglncn qtcscsngas
      421 crpadgfclc spgwqgefcd qpcpdgtygl ncsercdcnh adgcdpvtgy ccclagwtgi
      481 hcdnictqgr wgpncsiscs cenggscspe dgtcdcapgy rgplcqricp pgfyghhcsq
      541 pcpqcvhsng pchhvsghcd clpgfsgplc nqvcpsgkfg kdcaevcqct engtcnpidg
      601 scqcfpgwig mdcsqtcpag fwgpdcfhsc nchngalcsp ydgecrcthg wtglyctqrc
      661 paafygknca nvcqcqngad cdhitgqctc rtgftgkqce qkcspgtfgy gckqlcecmn
      721 natcdhvtgt cycspgfkgi rcdqaalmme elnpytkisp algserhsvg aiigiiilll
      781 iimvllalfv wyrrkqkekg hdmpsvsytp amrmtntdys lsdisqgsss vhcfsnpsyh
      841 tlscgvtsrf fpsnldgnss cklsnkildr etadwrpysy lnelgacgmd rrqntyimek
      901 sfkdymkesv cssstcslns senpyatikd ppiltckhse ssyvemkspg hrespysemp
      961 tsstankniy eveptvsivq dtrsrsasyl qnpydlprns hipghydllp vrhspthgps
     1021 wdkqs
//
LOCUS       XP_041324986             426 aa            linear   VRT 06-MAY-2021
DEFINITION  mothers against decapentaplegic homolog 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324986
VERSION     XP_041324986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469052.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="mothers against decapentaplegic homolog 3
                     isoform X1"
                     /calculated_mol_wt=48105
     Region          8..132
                     /region_name="MH1_SMAD_2_3"
                     /note="N-terminal Mad Homology 1 (MH1) domain in SMAD2 and
                     SMAD3; cd10491"
                     /db_xref="CDD:199815"
     Site            order(33,37,70,74..78,81,100..101)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199815"
     Site            order(64,109,121,126)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:199815"
     Region          225..415
                     /region_name="MH2_SMAD_2_3"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD2 and
                     SMAD3; cd10985"
                     /db_xref="CDD:199826"
     Site            order(242,247..248,250,261..265,269,273,276,278..279,
                     285..286,288..290,293,362,365,368,372,374,378..380,385,
                     387,391,396,398,400,402,405..406,408..409,412..413)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:199826"
     CDS             1..426
                     /gene="SMAD3"
                     /coded_by="XM_041469052.1:290..1570"
                     /db_xref="GeneID:121354426"
ORIGIN      
        1 mssilpftpp ivkrllgwkk geqngqeekw cekavkslvk klkktgqlde lekaittqni
       61 ntkcitiprs ldgrlqvshr kglphviycr lwrwpdlhsh helramemce fafnmkkdev
      121 cvnpyhyqrv etpvlppvlv prhteipaef pplddyshsi pentnfpagi epqsnyipet
      181 pppgylsedg etsdhqmnps mdagspnlsp npmspahnnl dlqpvtycep afwcsisyye
      241 lnqrvgetfh asqpsmtvdg ftdpsnserf clgllsnvnr naaveltrrh igrgvrlyyi
      301 ggevfaecls dsaifvqspn cnqrygwhpa tvckippgcn lkifnnqefa allaqsvnqg
      361 feavyqltrm ctirmsfvkg wgaeyrrqtv tstpcwielh lngplqwldk vltqmgspsi
      421 rcssvs
//
LOCUS       XP_041324987             416 aa            linear   VRT 06-MAY-2021
DEFINITION  mothers against decapentaplegic homolog 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324987
VERSION     XP_041324987.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469053.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="mothers against decapentaplegic homolog 3
                     isoform X2"
                     /calculated_mol_wt=47006
     Region          8..132
                     /region_name="MH1_SMAD_2_3"
                     /note="N-terminal Mad Homology 1 (MH1) domain in SMAD2 and
                     SMAD3; cd10491"
                     /db_xref="CDD:199815"
     Site            order(33,37,70,74..78,81,100..101)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199815"
     Site            order(64,109,121,126)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:199815"
     Region          215..405
                     /region_name="MH2_SMAD_2_3"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD2 and
                     SMAD3; cd10985"
                     /db_xref="CDD:199826"
     Site            order(232,237..238,240,251..255,259,263,266,268..269,
                     275..276,278..280,283,352,355,358,362,364,368..370,375,
                     377,381,386,388,390,392,395..396,398..399,402..403)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:199826"
     CDS             1..416
                     /gene="SMAD3"
                     /coded_by="XM_041469053.1:291..1541"
                     /db_xref="GeneID:121354426"
ORIGIN      
        1 mssilpftpp ivkrllgwkk geqngqeekw cekavkslvk klkktgqlde lekaittqni
       61 ntkcitiprs ldgrlqvshr kglphviycr lwrwpdlhsh helramemce fafnmkkdev
      121 cvnpyhyqrv etpvlppvlv prhteipaef pplddyshsi pentnfpaet pppgylsedg
      181 etsdhqmnps mdagspnlsp npmspahnnl dlqpvtycep afwcsisyye lnqrvgetfh
      241 asqpsmtvdg ftdpsnserf clgllsnvnr naaveltrrh igrgvrlyyi ggevfaecls
      301 dsaifvqspn cnqrygwhpa tvckippgcn lkifnnqefa allaqsvnqg feavyqltrm
      361 ctirmsfvkg wgaeyrrqtv tstpcwielh lngplqwldk vltqmgspsi rcssvs
//
LOCUS       XP_041324988             317 aa            linear   VRT 06-MAY-2021
DEFINITION  ceroid-lipofuscinosis neuronal protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041324988
VERSION     XP_041324988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469054.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..317
                     /product="ceroid-lipofuscinosis neuronal protein 6"
                     /calculated_mol_wt=36413
     Region          30..309
                     /region_name="CLN6"
                     /note="Ceroid-lipofuscinosis neuronal protein 6;
                     pfam15156"
                     /db_xref="CDD:464536"
     CDS             1..317
                     /gene="CLN6"
                     /coded_by="XM_041469054.1:1..954"
                     /db_xref="GeneID:121354427"
ORIGIN      
        1 mqgsarrrpf paaapgsppp agplypgrhg avkaedtfkt spfhldlwfy ftlqnwvldf
       61 grpiamiilp lewfplnkps agdyfhmayn vitpflllkl ierspktlpr smvyvsiitf
      121 vmgasihlvg dsvnhrlifs gyqhhlsvre npiirnlkpe tlidsfelly yydeylghsm
      181 wyipfflilf iyftgcftpa aeqgrmplaa lllvgpssly ywylvtegqi filyiftffa
      241 mmalvlhqrr kglvldsngl flflsfiitl lliaawvgwl wndkilrkky pgviyipepw
      301 afytlhmnnl haakggf
//
LOCUS       XP_041324989             372 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 28 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324989
VERSION     XP_041324989.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469055.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="leucine-rich repeat-containing protein 28
                     isoform X1"
                     /calculated_mol_wt=42418
     Region          <43..>226
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          48..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          72..94
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          95..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..372
                     /gene="LRRC28"
                     /coded_by="XM_041469055.1:155..1273"
                     /db_xref="GeneID:121354428"
ORIGIN      
        1 mwclvmasel cktiseakle rhknlflnyr nlhhfplell kdeglqyler lymkrnsltt
       61 lpenlaqklp nlvelylhsn nivvvpeaig slvklqfldl sdnaleivcp eigrlrslrh
      121 lrlannqlky lpaevgdlre lqtldistnr lmtlperlhm clslqyltad rnhlwsvprh
      181 lcqlpslnel smagnrlafl pldlgrsrel qyvyvdnnih lkglpsylyn kvigcsgcgs
      241 piqvsevkll sfssgqltvf lpaevksigt etdhvlplqe lamrtlynty yrflkdlnfl
      301 tpislpksll ellhcplghc hrcsqpmfti vypklfplre tpmaglhqgr ttvsfvaycc
      361 stqclqtfdl ls
//
LOCUS       XP_041324990             372 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 28 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324990
VERSION     XP_041324990.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469056.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="leucine-rich repeat-containing protein 28
                     isoform X1"
                     /calculated_mol_wt=42418
     Region          <43..>226
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          48..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          72..94
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          95..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..372
                     /gene="LRRC28"
                     /coded_by="XM_041469056.1:95..1213"
                     /db_xref="GeneID:121354428"
ORIGIN      
        1 mwclvmasel cktiseakle rhknlflnyr nlhhfplell kdeglqyler lymkrnsltt
       61 lpenlaqklp nlvelylhsn nivvvpeaig slvklqfldl sdnaleivcp eigrlrslrh
      121 lrlannqlky lpaevgdlre lqtldistnr lmtlperlhm clslqyltad rnhlwsvprh
      181 lcqlpslnel smagnrlafl pldlgrsrel qyvyvdnnih lkglpsylyn kvigcsgcgs
      241 piqvsevkll sfssgqltvf lpaevksigt etdhvlplqe lamrtlynty yrflkdlnfl
      301 tpislpksll ellhcplghc hrcsqpmfti vypklfplre tpmaglhqgr ttvsfvaycc
      361 stqclqtfdl ls
//
LOCUS       XP_041324991             372 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 28 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324991
VERSION     XP_041324991.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469057.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="leucine-rich repeat-containing protein 28
                     isoform X1"
                     /calculated_mol_wt=42418
     Region          <43..>226
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          48..71
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          72..94
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          95..140
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          141..163
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          164..186
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          187..209
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..372
                     /gene="LRRC28"
                     /coded_by="XM_041469057.1:208..1326"
                     /db_xref="GeneID:121354428"
ORIGIN      
        1 mwclvmasel cktiseakle rhknlflnyr nlhhfplell kdeglqyler lymkrnsltt
       61 lpenlaqklp nlvelylhsn nivvvpeaig slvklqfldl sdnaleivcp eigrlrslrh
      121 lrlannqlky lpaevgdlre lqtldistnr lmtlperlhm clslqyltad rnhlwsvprh
      181 lcqlpslnel smagnrlafl pldlgrsrel qyvyvdnnih lkglpsylyn kvigcsgcgs
      241 piqvsevkll sfssgqltvf lpaevksigt etdhvlplqe lamrtlynty yrflkdlnfl
      301 tpislpksll ellhcplghc hrcsqpmfti vypklfplre tpmaglhqgr ttvsfvaycc
      361 stqclqtfdl ls
//
LOCUS       XP_041324992             221 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 28 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324992
VERSION     XP_041324992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="leucine-rich repeat-containing protein 28
                     isoform X2"
                     /calculated_mol_wt=24904
     Region          <2..>79
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          13..35
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          36..58
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..221
                     /gene="LRRC28"
                     /coded_by="XM_041469058.1:215..880"
                     /db_xref="GeneID:121354428"
ORIGIN      
        1 mtlperlhmc lslqyltadr nhlwsvprhl cqlpslnels magnrlaflp ldlgrsrelq
       61 yvyvdnnihl kglpsylynk vigcsgcgsp iqvsevklls fssgqltvfl paevksigte
      121 tdhvlplqel amrtlyntyy rflkdlnflt pislpkslle llhcplghch rcsqpmftiv
      181 ypklfplret pmaglhqgrt tvsfvayccs tqclqtfdll s
//
LOCUS       XP_041324993             221 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 28 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324993
VERSION     XP_041324993.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469059.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="leucine-rich repeat-containing protein 28
                     isoform X2"
                     /calculated_mol_wt=24904
     Region          <2..>79
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          13..35
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          36..58
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..221
                     /gene="LRRC28"
                     /coded_by="XM_041469059.1:335..1000"
                     /db_xref="GeneID:121354428"
ORIGIN      
        1 mtlperlhmc lslqyltadr nhlwsvprhl cqlpslnels magnrlaflp ldlgrsrelq
       61 yvyvdnnihl kglpsylynk vigcsgcgsp iqvsevklls fssgqltvfl paevksigte
      121 tdhvlplqel amrtlyntyy rflkdlnflt pislpkslle llhcplghch rcsqpmftiv
      181 ypklfplret pmaglhqgrt tvsfvayccs tqclqtfdll s
//
LOCUS       XP_041324994             221 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 28 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041324994
VERSION     XP_041324994.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469060.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="leucine-rich repeat-containing protein 28
                     isoform X2"
                     /calculated_mol_wt=24904
     Region          <2..>79
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          13..35
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          36..58
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..221
                     /gene="LRRC28"
                     /coded_by="XM_041469060.1:110..775"
                     /db_xref="GeneID:121354428"
ORIGIN      
        1 mtlperlhmc lslqyltadr nhlwsvprhl cqlpslnels magnrlaflp ldlgrsrelq
       61 yvyvdnnihl kglpsylynk vigcsgcgsp iqvsevklls fssgqltvfl paevksigte
      121 tdhvlplqel amrtlyntyy rflkdlnflt pislpkslle llhcplghch rcsqpmftiv
      181 ypklfplret pmaglhqgrt tvsfvayccs tqclqtfdll s
//
LOCUS       XP_041324996             230 aa            linear   VRT 06-MAY-2021
DEFINITION  LRP chaperone MESD [Pyrgilauda ruficollis].
ACCESSION   XP_041324996
VERSION     XP_041324996.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469062.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..230
                     /product="LRP chaperone MESD"
                     /calculated_mol_wt=25574
     Region          46..196
                     /region_name="Mesd"
                     /note="Chaperone for wingless signalling and trafficking
                     of LDL receptor; pfam10185"
                     /db_xref="CDD:462985"
     CDS             1..230
                     /gene="MESD"
                     /coded_by="XM_041469062.1:4..696"
                     /db_xref="GeneID:121354429"
ORIGIN      
        1 mrrpgppsrg rqkmaaaagw vllalalcls aaaatggseg krppkkkdir dyndadmarl
       61 leqwekdddi eegdlpehkr ppapidfski dpgkpesilk ltkkgktlmm fvtvsgnpte
      121 keteeitslw qgslfnanyd vqrfivgsnr aifmlrdggy aweikdflin qercadvtle
      181 gqvypgkgad gnekvknktk pekakkkkdt ekksngiked nratnqreel
//
LOCUS       XP_041324997             691 aa            linear   VRT 06-MAY-2021
DEFINITION  protein zwilch homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041324997
VERSION     XP_041324997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469063.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..691
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..691
                     /product="protein zwilch homolog"
                     /calculated_mol_wt=76469
     Region          127..672
                     /region_name="Zwilch"
                     /note="RZZ complex, subunit zwilch; pfam09817"
                     /db_xref="CDD:401684"
     CDS             1..691
                     /gene="ZWILCH"
                     /coded_by="XM_041469063.1:1..2076"
                     /db_xref="GeneID:121354430"
ORIGIN      
        1 mslrlltaaa aapavqpptp sssagpsssp gptpypsllg pdthipsslg apaqlisppk
       61 qgtllrrrdp alrvtlpsqt spsaggrelr lwraamaaer rrraggglsg lllrvleegk
      121 dsipehpyly etdveislvd gsckspvekf wngssamyil qkathneesd smeesradda
      181 vyasevlpke spgalalsvg rakqlislyt mvqnpnvtsl gmsdlavlpp lwarcdgsdp
      241 qhtcwigaep lkadskvtgl niymvscdgp tadkthfpnl eelkmehkir hhsssvttkg
      301 faryeliaaa amedtmaesg sniyvditwn gvekiletpp visaatlnia lelgnprspv
      361 fqlyqelqfl lalaeclktg vtewpepses esalklvqef ltdlkkkldg dyifedknet
      421 ekikcdtaav dsciksifge rgdldfteql wckmksvssy qelidcfklv ikslehgeiq
      481 pwihqgsssf lsqliqqsyh gkmedvslsd itpiqmllev glekmkkdyv hffigqelat
      541 vtyldyfist svelqeqvhr vqklhhmlev mvsctallqf khenlfpltq icmkyykenp
      601 lnekhvfqlp irpalvkkfy qddnpevwkv eissgrgqke vkttwqvstn apvehgtsdn
      661 sgfmsdstvn gssegrlyfi tmtqcsqvqf t
//
LOCUS       XP_041324998             394 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L4 [Pyrgilauda ruficollis].
ACCESSION   XP_041324998
VERSION     XP_041324998.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469064.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..394
                     /product="60S ribosomal protein L4"
                     /calculated_mol_wt=44201
     Region          2..347
                     /region_name="PTZ00428"
                     /note="60S ribosomal protein L4; Provisional"
                     /db_xref="CDD:185611"
     CDS             1..394
                     /gene="RPL4"
                     /coded_by="XM_041469064.1:150..1334"
                     /db_xref="GeneID:121354431"
ORIGIN      
        1 macarplisv ysekgeasgk nvtlpavfka pirpdvvnfv htnlrknnrq pyavselagh
       61 qtsaeswgtg ravariprvr gggthrsgqg afgnmcrggr mfaptktwrr whrrvnvmqk
      121 ryaicsalaa salpalvmsk ghrieeipel plvvedkveg ykktkeavll lkklkawndi
      181 kkvyasqrmr agkgkmrnrr riqrrgpcii ynedngiira frnipgitll nvnklnllrl
      241 apgghvgrfc iwtesafrkl ddlygtwrka atlksdynlp mhkmtntdig rimrsqeiqk
      301 alrapkkkiq rrvlkknplk nlrimiklnp yaktmrrnti lrhaqnhklk eekkakaqek
      361 laakapaapk aepaakkakt akaakpaaka kaea
//
LOCUS       XP_041324999             939 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 280D isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041324999
VERSION     XP_041324999.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469065.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..939
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..939
                     /product="zinc finger protein 280D isoform X1"
                     /calculated_mol_wt=105147
     Region          35..>243
                     /region_name="DUF4195"
                     /note="Domain of unknown function (DUF4195); pfam13836"
                     /db_xref="CDD:463993"
     Region          <113..>259
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          335..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          372..393
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(377,379,381,383..384,387..388,392,407,409,413..414,
                     417..418,421,437,439,441,443..444,447..448,451)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          402..423
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          432..451
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..939
                     /gene="ZNF280D"
                     /coded_by="XM_041469065.1:225..3044"
                     /db_xref="GeneID:121354432"
ORIGIN      
        1 maelfmecee eelepwqkrv reveeddedd ddepifvgei ssskpattyi lnrvnlsspr
       61 rgiqngapsr gpvttftses qhyvtpassp galpapsvfq pvprpatssv avqplavavn
      121 vsgatqtlqr pvagclstqq vpgsssgiaq pvsrpvtipv ttqpvsrnit vpvvaqpvsr
      181 petpataqpv ilnqdyimds ppdapdntsg ilfgvrqnsg vpqyqtgpav nvtgtnaass
      241 tiknggpfpr acpkcnihfn lmdplknhmk yccpdmvnnf fsemvktecl sttsktiese
      301 kgklimlvnd fyygkdegdl qqvqqeqkth ttfkcisclk vlknnirfmn hmkhhlelek
      361 qsneswesht tcqhcyrqfp tpfqlqchie sthtpyesst ickicelsfe teqvllqhmk
      421 dnhkpgempy vcqvcsyrss afsdvethfr tvhentkhll cpfclkviki gapymhhymr
      481 hqkkgiyrct kcrlqfltck ekmdhktqhh rtfrkpkqle glppgtkvti raslgshqsg
      541 ssatssvsts sstfqlspka kstttknnnk sntsksrgks kqstsrkqnt wtnsrkkkep
      601 tnvvfhnlry hggthkciec fseikdfanh fhayvhcslc ryntscskay vnhmmsfhsa
      661 rpskrfwifk khsevlrgvt vvclncdfla dvsgldnmat hlsenqthtc qvivekvstd
      721 nttaaqvshn qehdssdetk ernrnqtkkv asvekredss lsntenvrsl elpgnsskns
      781 lhekraycds asrkqlvdek qkcihdesem kmcqsspyvv lneqtevrtw detvlsaknv
      841 rdlkltlged vsfeqflrkr depesvssdi seqgsihlep ltpsevlehe ateilqkgnv
      901 apsskkagql aeqtdetsre snpsrmetta nktdeneas
//
LOCUS       XP_041325000             917 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 280D isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325000
VERSION     XP_041325000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..917
                     /product="zinc finger protein 280D isoform X2"
                     /calculated_mol_wt=102742
     Region          35..>221
                     /region_name="DUF4195"
                     /note="Domain of unknown function (DUF4195); pfam13836"
                     /db_xref="CDD:463993"
     Region          <41..183
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          313..347
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          350..371
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(355,357,359,361..362,365..366,370,385,387,391..392,
                     395..396,399,415,417,419,421..422,425..426,429)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          380..401
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          410..429
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..917
                     /gene="ZNF280D"
                     /coded_by="XM_041469066.1:224..2977"
                     /db_xref="GeneID:121354432"
ORIGIN      
        1 maelfmecee eelepwqkrv reveeddedd ddepifvgei ssskpattcp vttftsesqh
       61 yvtpasspga lpapsvfqpv prpatssvav qplavavnvs gatqtlqrpv agclstqqvp
      121 gsssgiaqpv srpvtipvtt qpvsrnitvp vvaqpvsrpe tpataqpvil nqdyimdspp
      181 dapdntsgil fgvrqnsgvp qyqtgpavnv tgtnaassti knggpfprac pkcnihfnlm
      241 dplknhmkyc cpdmvnnffs emvkteclst tsktiesekg klimlvndfy ygkdegdlqq
      301 vqqeqkthtt fkcisclkvl knnirfmnhm khhlelekqs nesweshttc qhcyrqfptp
      361 fqlqchiest htpyesstic kicelsfete qvllqhmkdn hkpgempyvc qvcsyrssaf
      421 sdvethfrtv hentkhllcp fclkvikiga pymhhymrhq kkgiyrctkc rlqfltckek
      481 mdhktqhhrt frkpkqlegl ppgtkvtira slgshqsgss atssvstsss tfqlspkaks
      541 tttknnnksn tsksrgkskq stsrkqntwt nsrkkkeptn vvfhnlryhg gthkciecfs
      601 eikdfanhfh ayvhcslcry ntscskayvn hmmsfhsarp skrfwifkkh sevlrgvtvv
      661 clncdfladv sgldnmathl senqthtcqv ivekvstdnt taaqvshnqe hdssdetker
      721 nrnqtkkvas vekredssls ntenvrslel pgnssknslh ekraycdsas rkqlvdekqk
      781 cihdesemkm cqsspyvvln eqtevrtwde tvlsaknvrd lkltlgedvs feqflrkrde
      841 pesvssdise qgsihleplt psevleheat eilqkgnvap sskkagqlae qtdetsresn
      901 psrmettank tdeneas
//
LOCUS       XP_041325001             883 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 280D isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325001
VERSION     XP_041325001.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469067.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..883
                     /product="zinc finger protein 280D isoform X3"
                     /calculated_mol_wt=98636
     Region          <30..149
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <95..>187
                     /region_name="DUF4195"
                     /note="Domain of unknown function (DUF4195); pfam13836"
                     /db_xref="CDD:463993"
     Region          279..313
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275371"
     Region          316..337
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(321,323,325,327..328,331..332,336,351,353,357..358,
                     361..362,365,381,383,385,387..388,391..392,395)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          346..367
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          376..395
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..883
                     /gene="ZNF280D"
                     /coded_by="XM_041469067.1:182..2833"
                     /db_xref="GeneID:121354432"
ORIGIN      
        1 mvhpveitle sfatgpvttf tsesqhyvtp asspgalpap svfqpvprpa tssvavqpla
       61 vavnvsgatq tlqrpvagcl stqqvpgsss giaqpvsrpv tipvttqpvs rnitvpvvaq
      121 pvsrpetpat aqpvilnqdy imdsppdapd ntsgilfgvr qnsgvpqyqt gpavnvtgtn
      181 aasstikngg pfpracpkcn ihfnlmdplk nhmkyccpdm vnnffsemvk teclsttskt
      241 iesekgklim lvndfyygkd egdlqqvqqe qkthttfkci sclkvlknni rfmnhmkhhl
      301 elekqsnesw eshttcqhcy rqfptpfqlq chiesthtpy esstickice lsfeteqvll
      361 qhmkdnhkpg empyvcqvcs yrssafsdve thfrtvhent khllcpfclk vikigapymh
      421 hymrhqkkgi yrctkcrlqf ltckekmdhk tqhhrtfrkp kqleglppgt kvtiraslgs
      481 hqsgssatss vstssstfql spkakstttk nnnksntsks rgkskqstsr kqntwtnsrk
      541 kkeptnvvfh nlryhggthk ciecfseikd fanhfhayvh cslcryntsc skayvnhmms
      601 fhsarpskrf wifkkhsevl rgvtvvclnc dfladvsgld nmathlsenq thtcqvivek
      661 vstdnttaaq vshnqehdss detkernrnq tkkvasvekr edsslsnten vrslelpgns
      721 sknslhekra ycdsasrkql vdekqkcihd esemkmcqss pyvvlneqte vrtwdetvls
      781 aknvrdlklt lgedvsfeqf lrkrdepesv ssdiseqgsi hlepltpsev leheateilq
      841 kgnvapsskk agqlaeqtde tsresnpsrm ettanktden eas
//
LOCUS       XP_041325002             624 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM189A1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325002
VERSION     XP_041325002.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469068.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="protein FAM189A1 isoform X1"
                     /calculated_mol_wt=67212
     Region          <1..102
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     CDS             1..624
                     /gene="FAM189A1"
                     /coded_by="XM_041469068.1:171..2045"
                     /db_xref="GeneID:121354433"
ORIGIN      
        1 mllsavcvml nlagsilscq naqlvksleg cqlikfdsdg vcvccemqhq tsgcsnlget
       61 lklnplqecn avrltlkdll fsvcalniis tivcalatam ccmqmvssdl lqmflpqrph
      121 sanpdcmtph gtvlhqtldf defippippp pyyppeytct pvgeaqrslh ldfphspfga
      181 lyevtinspg mlypselppp yeavigempv sqvtgaaqqv sesslgernt tpdfstqvsv
      241 estslmvsea vdipdrsyss edlcslevqg slqsadlspy citpkgaadq scsaldchth
      301 csfhrtrseg ypdegnsshs rastdksqgq ekncahgrsl dcssgnysps erelqssaqe
      361 ssatpplkqk ktccvdfhqp patfltspcf gpanpsprag gpeaaaqhla qqpasnivrs
      421 ssapvscssa tegdncawts vcrqcqdagl spatgetvpv sgshmaasac qhslssflpt
      481 gkqrdtrkid lhlkpkafht vskerphslv dlkaykdtki lvakflehsn cnlppevrhv
      541 vnsirsviks derhmeeaif saniidqvmt ssrrgaggcr krpqedlhlr scgalssprr
      601 aplsragrre rphsligvcr etil
//
LOCUS       XP_041325004             546 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM189A1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325004
VERSION     XP_041325004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469070.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..546
                     /product="protein FAM189A1 isoform X2"
                     /calculated_mol_wt=58570
     Region          <1..102
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     CDS             1..546
                     /gene="FAM189A1"
                     /coded_by="XM_041469070.1:96..1736"
                     /db_xref="GeneID:121354433"
ORIGIN      
        1 mllsavcvml nlagsilscq naqlvksleg cqlikfdsdg vcvccemqhq tsgcsnlget
       61 lklnplqecn avrltlkdll fsvcalniis tivcalatam ccmqmvssdl lqmflpqrph
      121 sanpdcmtph gtvlhqtldf defippippp pyyppeytct pvgeaqrslh ldfphspfga
      181 lyevtinspg mlypselppp yeavigempv sqvtgaaqqv sesslgernt tpdfstqvsv
      241 estslmvsea vdipdrsyss edlcslevqg slqsadlspy citpkgaadq scsaldchth
      301 csfhrtrseg ypdegnsshs rastdksqgq ekncahgrsl dcssgnysps erelqssaqe
      361 ssatpplkqk ktccvdfhqp patfltspcf gpanpsprag gpeaaaqhla qqpasnivrs
      421 ssapvscssa tegdncawts vcrqcqdagl spatgetevr hvvnsirsvi ksderhmeea
      481 ifsaniidqv mtssrrgagg crkrpqedlh lrscgalssp rraplsragr rerphsligv
      541 cretil
//
LOCUS       XP_041325005             209 aa            linear   VRT 06-MAY-2021
DEFINITION  5-formyltetrahydrofolate cyclo-ligase [Pyrgilauda ruficollis].
ACCESSION   XP_041325005
VERSION     XP_041325005.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469071.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /calculated_mol_wt=23478
     Region          18..207
                     /region_name="5-FTHF_cyc-lig"
                     /note="5-formyltetrahydrofolate cyclo-ligase family;
                     pfam01812"
                     /db_xref="CDD:396398"
     CDS             1..209
                     /gene="MTHFS"
                     /coded_by="XM_041469071.1:1..630"
                     /db_xref="GeneID:121354434"
ORIGIN      
        1 meraghggam aaalraakrq lraelrqrlr algaaekqrq srllgrkvid hpkyqeskri
       61 avflsmpdev qteeiikdif kqgkecfipr ykpqsnhmdm lklssaedis slaltswnil
      121 qpsdddtare ealagggldl ifmpglgfdk kgnrlgrgkg yydtylercm khphgkpyti
      181 alafreqice svpvtendvp ideilyedc
//
LOCUS       XP_041325006            1360 aa            linear   VRT 06-MAY-2021
DEFINITION  cell migration-inducing and hyaluronan-binding protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325006
VERSION     XP_041325006.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469072.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1360
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1360
                     /product="cell migration-inducing and hyaluronan-binding
                     protein"
                     /calculated_mol_wt=152653
     Region          42..161
                     /region_name="G8"
                     /note="G8 domain; pfam10162"
                     /db_xref="CDD:462971"
     Region          137..299
                     /region_name="PANDER_like_TMEM2"
                     /note="PANDER-like domain of the transmembrane protein
                     TMEM2; cd13938"
                     /db_xref="CDD:260112"
     Region          321..402
                     /region_name="Mucin2_WxxW"
                     /note="Mucin-2 protein WxxW repeating region; pfam13330"
                     /db_xref="CDD:463846"
     Region          1204..1360
                     /region_name="PANDER_like_KIAA1199"
                     /note="PANDER-like domain of KIAA1199 and similar
                     proteins; cd13941"
                     /db_xref="CDD:260115"
     CDS             1..1360
                     /gene="LOC121354435"
                     /coded_by="XM_041469072.1:1..4083"
                     /db_xref="GeneID:121354435"
ORIGIN      
        1 malptskcla gslgfflfvv ssvstaeaav tcpdrepele iwnpghneen rveirsgrkl
       61 llsssatvhs ihitdrgklv ikddvqpiil rtrhiliend gelhigselc pyqgnvviil
      121 ygraddgsqp npyfgrkylg vskggtleih gkkklswtfl nktlhpggme eggyyfersw
      181 ghrgvivhvi dpktgavvhs drfdtyrake esvrlaqylg rvangmilsv avndegsrnl
      241 ddlarkamtk lgskhflhlg frhpwsfiti kgnpsssved hieyqghkgs avakvfklfk
      301 aengehfnvs stsewvqdve wtewfekpdk arskdmekls dfkaahpdkv crqpidiqam
      361 tldgadltae vfyksghdyq flchgkdqtg qgchnyrvrf lcgksvkpkl tvtidtnvns
      421 tilnladdvs swrpgdrlvv astdysmyqa eefqvlpcrt crptqvkvag katylhvgev
      481 vdgvdmraev gllsrnvvvm gdmeqqcyey ssklcsffdf dtfgghikig ldfkathieg
      541 lelkhmgqqt mghypihfhm agdvdekggy npptyvkdts ihntfsrcvt vhgsngllvk
      601 dvvgydalgh cfftedgpee rntfdhclgl lvkpstllps drdsrmckli tegaypgyip
      661 kprqdcsavs tfwianphnn lincaaagse etgfwfvlhh vptgpsagmy spgysehmpm
      721 gkfsnnrahs nyragmiidn gvkttpasak dkrpiltlis grysphkdad plkprepaii
      781 egfiayknqd hgawlrggdv wldncqfadn gigltlasgg tfphddgskq eiknslfvge
      841 sgnlgtetmd neiwgpggld hrgrtlpigp dfpirgiqfy dgpinvqnct frkfaaldgr
      901 htsalafrln nawqscpnnn vtairfedvp itsrvffgep gpwfndldmd gdktsvfhdv
      961 dgsvseypgs ylikednwli khpdcidvpd wrgsicsghf aqmyiqaykp anlkmkiikn
     1021 dyhnhplyle galsksthyq qyqpvvtlrk gytihwdkta peelaiwlin fnkndwiqvg
     1081 fcypkgttfs ilsdihnrll kktyktgtfy rtsqmekleh ryptkgyyyw dedtgllflk
     1141 lkaqnekekf afcsvkgcer irikavipkt agvsdceata ypkyietpiv evpmpkklss
     1201 aqlktkdhli evkietykkq yfhlkddfay ievdgvrffl teegiqlvvi dghhgkvvdr
     1261 vtfknsilqg ipaqienyvn nikdhsivlv tskgrfisrg pwtkvleklg agegfrlkek
     1321 mafvgfkgsf rpvwvklvtn edsakiyqal pipvvkkmkl
//
LOCUS       XP_041325007             630 aa            linear   VRT 06-MAY-2021
DEFINITION  SHC-transforming protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325007
VERSION     XP_041325007.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469073.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..630
                     /product="SHC-transforming protein 4"
                     /calculated_mol_wt=68434
     Region          180..343
                     /region_name="PTB_Shc"
                     /note="Shc-like phosphotyrosine-binding (PTB) domain;
                     cd01209"
                     /db_xref="CDD:269920"
     Site            order(202..205,210,285..293,305,311,324,327..328,330..331,
                     334..335,338..341,343)
                     /site_type="other"
                     /note="phosphopeptide binding site [polypeptide binding]"
                     /db_xref="CDD:269920"
     Site            order(248,252,275)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269920"
     Region          518..620
                     /region_name="SH2_SHC"
                     /note="Src homology 2 (SH2) domain found in SH2 adaptor
                     protein C (SHC); cd09925"
                     /db_xref="CDD:198179"
     Site            order(533,549,551,556,561,570..572)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198179"
     Site            order(560,571,573,575,580..582,587,593,604..606)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198179"
     CDS             1..630
                     /gene="SHC4"
                     /coded_by="XM_041469073.1:210..2102"
                     /db_xref="GeneID:121354436"
ORIGIN      
        1 mrersqqslg ghvlyvglfr hpgmlhrsky srfrndsits ldegtqntsl nikgsssssh
       61 sstptllted vslgpqdtct tlctliprma niklanpsnl pglksfclgt kevpriklte
      121 cvtipsspas peisclsasy pqpeldklfp vpkaagdcae eaaavgrqdr glaqssdsty
      181 sqepgttysv rymgcievlq smrsldfgtr tqvtreaisr lceavsgtng aikkrkppvk
      241 flssvlgksn lqfsgmnikl tistssltli nadtqqiian hhmqsisfas ggdpdttdyv
      301 ayvakdpvnq rachilecpn gmaqevinti gqafelrfrq ylknpsslvt sneseaanan
      361 gsagnsqere dhheyyneip gkepptggvl dmrmktqtdp rakcpvqckk qycstgsptf
      421 iniyencpee nktvgncder sqktikeats lkpaykadlf ddpcyintqs lhsaacaarg
      481 paaaqipgsp lcqaklpepv qqsatsntag lcvlpqikqq lknedcyhgk lnrkaaesll
      541 vndgdflvre sttspgqyvl sglqggqakh lllvdpegkv rtkdhifdsv ghliqyhmen
      601 nlpiissgse vslkqpvrke sntghmqyhk
//
LOCUS       XP_041325008             456 aa            linear   VRT 06-MAY-2021
DEFINITION  fumarylacetoacetase [Pyrgilauda ruficollis].
ACCESSION   XP_041325008
VERSION     XP_041325008.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469074.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..456
                     /product="fumarylacetoacetase"
                     /calculated_mol_wt=50505
     Region          39..453
                     /region_name="fum_ac_acetase"
                     /note="fumarylacetoacetase; TIGR01266"
                     /db_xref="CDD:162276"
     CDS             1..456
                     /gene="FAH"
                     /coded_by="XM_041469074.1:774..2144"
                     /db_xref="GeneID:121354437"
ORIGIN      
        1 mplcsglqhl eriflrgrhk apgrwelcas rgcsglsmsf iqvdkdsdfp lqnlpygvfs
       61 tkeeprhrlg vaigdqildl svikhlfngp alakhqhvfd qptlnafmgl gwpawteara
      121 flqkllsage ptlrdnaelr rrafvpqaaa tmhlpahigd ytdfyssrqh atnvgimfrg
      181 kenalmpnwl hlpvgyhgra ssvvvsgtpi rrpvgqmkpd ndkppvfgac krldielema
      241 ffvgpgnkfg epipisraqe hifgmvlmnd wsardiqkwe yvplgpflsk slgttispwv
      301 vtmealmpfv lpnpvqdpkp lpylqdkepy tfdiklfvai kgegmstptt icrsnfkhmy
      361 wtmkqqlahh singcnlrpg dllasgtisg pepesfgsml elswngtkei plgsgqsrkf
      421 lqdgdevilt gycqgngfrv gfgqcsgkil palsnp
//
LOCUS       XP_041325009            1588 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: dual oxidase 2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325009
VERSION     XP_041325009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469075.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1588
                     /product="LOW QUALITY PROTEIN: dual oxidase 2-like"
                     /calculated_mol_wt=180654
     Region          85..637
                     /region_name="dual_peroxidase_like"
                     /note="Dual oxidase and related animal heme peroxidases;
                     cd09820"
                     /db_xref="CDD:188652"
     Site            order(294..295,377,380..382,384,387,419,471,474,478)
                     /site_type="other"
                     /note="putative heme binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Site            order(345,348..349,353,376,380,382,539,543,547..548,
                     551..552,555)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:188652"
     Region          849..974
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          867..928
                     /region_name="EFh"
                     /note="EF-hand, calcium binding motif; A diverse
                     superfamily of calcium sensors and calcium signal
                     modulators; most examples in this alignment model have 2
                     active canonical EF hands. Ca2+ binding induces a
                     conformational change in the EF-hand motif, leading to...;
                     cd00051"
                     /db_xref="CDD:238008"
     Site            order(875,877,879,886,911,913,915,922)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238008"
     Region          1135..1273
                     /region_name="Ferric_reduct"
                     /note="Ferric reductase like transmembrane component;
                     pfam01794"
                     /db_xref="CDD:426438"
     Region          1314..1588
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(1342,1356..1359,1372..1374,1377..1380,1427)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1356,1358..1359)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            1422..1432
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(1422,1426..1429,1431)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(1427..1428,1459..1461,1558..1559)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(1457..1458,1461)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..1588
                     /gene="LOC121354438"
                     /coded_by="XM_041469075.1:1..4767"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon;
                     deleted 1 base in 1 codon"
                     /db_xref="GeneID:121354438"
ORIGIN      
        1 maavsfypaa npqkgaevws shvsslwees tcsslpllsi crllxsktqw pmdpaatmls
       61 llvvlvgtwt lgraqqsisw evqrydgwyn nllhhsqgsv garllrllpa nyadgvyqal
      121 qeprvpsarq lsnavargps glpsrrnttv lavffgfhvl ldiletekpg cpaeflnihi
      181 ppgdavfdpa gtgdvvlpfq rarwaaetgq spnnpreqtn evtgwldgss iygpshswsd
      241 alrsflggql asgpnrslpr qtdgrvpmwk aldpstgqgg prgiydlgsa wgnenpflqa
      301 esiawfryhn hlatalaqkh pawsdedlfq harkrviatf qsivlyewlp tllgtrvpey
      361 qgyqqhldps lspefvaaag qflatmvppg vykrdsrcrf qnvsvsgasf pavrlcnnyw
      421 srespglqqa eevdnlllgm ssqiaeredn vvvedlqdyw ygplkysrtd rvaswiqrgr
      481 dfglptynqv rqhfglkplq nwsnlaphle pqvlqkvaal ygnnvaglel lpggmleaeg
      541 slfstiileq flrlrdgdrf wfentknglf teeeireirn ttfhsvltsv tyakstdlqp
      601 hvfiwregdp cpqpqqltaq hlasctpmvv ldyfagsgag fgiiivvlcc lplvtlfvaw
      661 vvavfrkrdf kklqrkqgts vrrevsgeai hamewhgpkt dncpvyiqfq adkvlkvlds
      721 rgsvlrsinl kaqqrvevil snnrgnkall lkspkeydlv llfneeaers tfvgklgdyl
      781 kesrfdlhls emkeqslmkr avtqeqrkqi letffrhlfa qvleinrsda gelsfessqk
      841 akesltcels raefaealgl qehsmfvesm fsladkdgng yisfrefldi lvvfmkgspe
      901 ekskvmfrmy didengflsk eeflrmlrsf ieisnnclsr eqaeqvtesm frasgfqdrn
      961 eltwenfhym lrdhdselrl tqlcvrgipe vskqnlhncv sfikksepkg tiseekkdpn
     1021 ldtvshymer kgqelrkrpg rkvnqyqlrl yteaqrkkye rnrvqqkiqe fkrfvenyrr
     1081 hivcvilfsa vtagvfaera yyyafaspst giaqttfvgi iisrgsaasi sfmysyillt
     1141 mcrnlitvlr etflnhyipf daavdfhrwi amaalifsvl htaghvvnvy ifsvtplsvl
     1201 sclfssvftn dgsqlpqkyy wwffqtipgm tgvlllvvla vmyvfatrhf rrvsfqgfwi
     1261 thhlymllyi lviihgsyal iqqprfyiyl iipaliysad klyslsrkkv eisvvkaell
     1321 psgvthlqfq rpqdfdyksg qwvriacvgl gtteyhpftl tsaphddtls lhiravgpwt
     1381 trlrelyspk nlallgtlpk lyldgpfgeg hqewnkfevs vlvgggigvt pfasilkdlv
     1441 fkssinskll ckkiyfiwvt rtqrqfewlt diireveesd knglvsvhiy itqlaekfdl
     1501 rttmlyicer hfqkvlnksl ftglrsithf grppfvpffs slqevhpevq kigvfscgpp
     1561 gmtksveqac rqmnkkdqty fahhyenf
//
LOCUS       XP_041325010             321 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane progestin receptor gamma [Pyrgilauda ruficollis].
ACCESSION   XP_041325010
VERSION     XP_041325010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=34949
     Region          42..266
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..321
                     /gene="PAQR5"
                     /coded_by="XM_041469076.1:412..1377"
                     /db_xref="GeneID:121354439"
ORIGIN      
        1 mpsptarllr ahqvpesyre pgilsgyrpp rssaceclls lfgmnnetln iwthlvpagy
       61 flwlllarlr dwgseagagp flaylgtcal yplassaaha lgalggrgrh rayccdyaal
      121 slyglgsala ysayvfplew vgstfhdfyv pvavlnsvls tglscysrfl eaerprlska
      181 frtlafvypy ifdsipvfyr lsrsaagscs egslplhsrh slcalltfls ftshlperla
      241 pgsfdfighs hqvfhicgil gtlfqleais mdmaerrgrl plpssletfg slgmgaaasl
      301 ailgvcfrsl rpeppsreks h
//
LOCUS       XP_041325012             321 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane progestin receptor gamma [Pyrgilauda ruficollis].
ACCESSION   XP_041325012
VERSION     XP_041325012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="membrane progestin receptor gamma"
                     /calculated_mol_wt=34949
     Region          42..266
                     /region_name="HlyIII"
                     /note="Haemolysin-III related; pfam03006"
                     /db_xref="CDD:427098"
     CDS             1..321
                     /gene="PAQR5"
                     /coded_by="XM_041469078.1:380..1345"
                     /db_xref="GeneID:121354439"
ORIGIN      
        1 mpsptarllr ahqvpesyre pgilsgyrpp rssaceclls lfgmnnetln iwthlvpagy
       61 flwlllarlr dwgseagagp flaylgtcal yplassaaha lgalggrgrh rayccdyaal
      121 slyglgsala ysayvfplew vgstfhdfyv pvavlnsvls tglscysrfl eaerprlska
      181 frtlafvypy ifdsipvfyr lsrsaagscs egslplhsrh slcalltfls ftshlperla
      241 pgsfdfighs hqvfhicgil gtlfqleais mdmaerrgrl plpssletfg slgmgaaasl
      301 ailgvcfrsl rpeppsreks h
//
LOCUS       XP_041325013            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325013
VERSION     XP_041325013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469079.1:580..4461"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325014            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325014
VERSION     XP_041325014.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469080.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469080.1:432..4313"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325015            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325015
VERSION     XP_041325015.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469081.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469081.1:562..4443"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325016            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325016
VERSION     XP_041325016.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469082.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469082.1:644..4525"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325017            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325017
VERSION     XP_041325017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469083.1:451..4332"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325018            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325018
VERSION     XP_041325018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469084.1:788..4669"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325019            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325019
VERSION     XP_041325019.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469085.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469085.1:498..4379"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325020            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325020
VERSION     XP_041325020.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469086.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469086.1:626..4507"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325021            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325021
VERSION     XP_041325021.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469087.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="cingulin-like protein 1 isoform X1"
                     /calculated_mol_wt=148445
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1293
                     /gene="CGNL1"
                     /coded_by="XM_041469087.1:464..4345"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelsrlk kspskvlads
     1261 ddddddddfs tdgdslcevp sgnnfskddd tki
//
LOCUS       XP_041325022            1292 aa            linear   VRT 06-MAY-2021
DEFINITION  cingulin-like protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325022
VERSION     XP_041325022.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469088.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1292
                     /product="cingulin-like protein 1 isoform X2"
                     /calculated_mol_wt=148358
     Region          <582..1246
                     /region_name="Myosin_tail_1"
                     /note="Myosin tail; pfam01576"
                     /db_xref="CDD:460256"
     CDS             1..1292
                     /gene="CGNL1"
                     /coded_by="XM_041469088.1:580..4458"
                     /db_xref="GeneID:121354440"
ORIGIN      
        1 mepyfagfkh mqqdyevtle laseetqktk nvqnsrtgsy gvsirvqgid ghpyivlnnt
       61 egclpenppp pgkeqqvvph tvskpamdsn tafkledkis ehtkfagtqh mqpsmpkklq
      121 itnvndkesg mpdfkdetmk ssnllnfqrh pellqpydpe knnlnldnyq ssvcsksksf
      181 adekteakpr issskvvslq ktntcfaest kanskkihln rsvedvnkql qecpsstisp
      241 gdvcasesfs paggspcvsp taypetkkpr pdvlpfrrqd ssgpvlndsr rsssssatpt
      301 sanslyrfll ddqeyaiyad nvnrhenrry ipflpgtgrd idtgslpgvd qliekfdkki
      361 dahrrgrpgk rnrihpddrk rsrsvdsals lgldvnsgyl gefskslgks tehllrpskv
      421 clhkhlprdq kspsketkip arsigklqmp skdtqsscfs slqhhkqngt dteslmgksa
      481 tlpgqskree vktvtstlll pnrititpes gakkisvktc ssvpniqatp dllkgqqdla
      541 qqtneetakq ilynylkegs pdnddatkrk vnlvfekiqt lksraagktq vsdssaevka
      601 lveqkaeler kveelekkld levrnqqnsk eerdatrasl kdlqlqldrs icekealkkq
      661 leenemelrq nleelfqvkm eqekhqteir dlqdqlsemh deldnakhtd egekeiliee
      721 lmqmkqdlqe vliakdqqee ilrkrerelt alkgalkeev sshdaemdkl keqhekelld
      781 lrqslerate saavlasekn aaqeernsve nqvkelieen kqlkrtlael erkieelhkq
      841 idnmkgeens vkeklktyee ekqqlqealk haekegkell vlkaalesql edmqekirci
      901 sqerqqlsqq lkdetqqkeq ltqiknemen erlqlnesve klqeemsemv eisrtstlel
      961 qsqldeykek nrrefvdlqr qlkeknieve ksrlmnirmq demrlmeenl rdhqraqdea
     1021 itktqlleqt vksleyelea knhlkddrar qiklmedkls hleleldeek nnsdllseri
     1081 srcreqieqm rtellqerai kqdlecdkis lerqnkdlks rilhlegsyr sskeglvaqm
     1141 eariteleer laneerdrvn fqvsnrrler kvkelmlqvd dehlsltdqk dqlslrlkam
     1201 krqveeaeee idrlenakkk lqreleeqld ineqlqgqln takkelrlkk spskvladsd
     1261 dddddddfst dgdslcevps gnnfskdddt ki
//
LOCUS       XP_041325023            1340 aa            linear   VRT 06-MAY-2021
DEFINITION  Fanconi anemia group I protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325023
VERSION     XP_041325023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1340
                     /product="Fanconi anemia group I protein"
                     /calculated_mol_wt=149116
     Region          1..53
                     /region_name="FANCI_S1-cap"
                     /note="FANCI solenoid 1 cap; pfam14674"
                     /db_xref="CDD:434117"
     Region          41..1297
                     /region_name="FANCI"
                     /note="Fanconi anemia I protein; cd11720"
                     /db_xref="CDD:212594"
     Site            order(41,48,52,83..84,87,90..91,94..95,98,128,131,
                     182..183,215,219,275,279,282,378,444,448,451,482,485,
                     488..489,492,524..525,528,583..584,587..588,591..592,
                     594..595,618,620..624,627,630,680,684)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:212594"
     Site            order(289,293,296,333,338,341,981,1027,1079,1095,1108,
                     1162,1166,1176,1267,1274..1275)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:212594"
     CDS             1..1340
                     /gene="FANCI"
                     /coded_by="XM_041469089.1:41..4063"
                     /db_xref="GeneID:121354442"
ORIGIN      
        1 maqrilslaa eqgperlqea lqgltegelg dmvtrqalkg retaallrgi fkgspcsqrs
       61 gvlrrlqvyk hcvplvesgd lhlgkvseii gllmlearql pghalaelas lfvdvikggs
      121 ltngkslelf stvltalass kenlaygkge lngeefkkql intlcsskwd prcvihlanm
      181 frdiplsgee lqfvvekvlr mfskldlqei pplvyqllll sakgskktvl egiisffnql
      241 dkkqkeeqrv pesvdlevat mpldqlrhve gtvilhivsv inldqdlgee lirhlkteqq
      301 kdpgralcpf svalllsvav khrlqeqifd flktsitrsc kdlqflqask flqdlfpqqy
      361 ditavilevv knsafgwdhv tqglvdlgfs lmesyepkkp fggkaadnsy glskvpaqqa
      421 crlgasille tfkvhepirs dileqvlnrv ltkaaspvsh fidllsnivv saplvlqtss
      481 skvtetfdnl sflpidtvqg llravqpllk vsmsvrdsli lvlqkaifsr qldarkaava
      541 gfllllrnfk vlgslsssqc sqaigatqvq advhacynsa aneafcleil gslrrclsqq
      601 advrlmlyeg fydvlrrnsq lassimetll sqikqyylpq pdllpplkle gcimaqgdqi
      661 flqeplahll cciqhclawy kstvrlcqga eddeeeeeeg vgfeqnfedm lesvtrrmik
      721 seledfeldk sadfslssgv gvknniyaiq vmgicevlie ynfntgnfsk nkfedvlglf
      781 tcynklseil kekagknksa lsnktarsfl smgfvstllt alfrdnaqsh eeslavlrss
      841 teflryavsv alqkvqqlee tgqtdgpdgq naekmfqnlc kitqvllwry tsiptvvees
      901 gkkkgksisl lclegllrif ntvqqlypak ipqflqaldi tdgdaeetdi nvtekaafqi
      961 rqfqrslvnq lssaeddfna kemqslitvl stlsklldpg sqqflqfltw tvkvckenal
     1021 ediscckgll sllfsvhvly kspvgllrel aqdihaclgd idqdievegr chfavvnakt
     1081 aaptvcllvl gqvdkvleev dwlikkltsl gsdtsedpsq asnqnqalek gvilqlgtlv
     1141 tvyhelvqta lpagscvdtl lrslsktyai ltslikhyiq acrsssntip grleklvkls
     1201 gshltpqcys fityvqnihs eslsfveekk kkkkedeaaa vstvmakvlr dtkpipnlif
     1261 aieqyekfli hlskkskvnl mqymklstsr dfrinasvld salqernsed aenephndqs
     1321 ntaeqtdenq epkkkrqrkk
//
LOCUS       XP_041325024            1205 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase subunit gamma-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325024
VERSION     XP_041325024.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469090.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1205
                     /product="DNA polymerase subunit gamma-1 isoform X1"
                     /calculated_mol_wt=136959
     Region          95..388
                     /region_name="DNApol_Exo"
                     /note="DNA mitochondrial polymerase exonuclease domain;
                     pfam18136"
                     /db_xref="CDD:465664"
     Region          405..>447
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Region          758..1175
                     /region_name="DNA_pol_gammaA"
                     /note="Pol gammaA is a family A polymerase that is
                     responsible for DNA replication and repair in
                     mitochondria; cd08641"
                     /db_xref="CDD:176478"
     Site            order(766,770,773..774,820..822,824,826..829,861..862,900,
                     914,918,1067,1074,1105..1107)
                     /site_type="active"
                     /db_xref="CDD:176478"
     Site            order(766,770,773..774,820..822,824,826..829,926,
                     1066..1067,1070,1074,1105..1107)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176478"
     Site            order(861..862,864,900,914,918,1107)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176478"
     CDS             1..1205
                     /gene="POLG"
                     /coded_by="XM_041469090.1:115..3732"
                     /db_xref="GeneID:121354443"
ORIGIN      
        1 mrrvpwmrpv rgcspqprrc sssssasrpl peepgqepaa sqrrmnplni qmlsrslheq
       61 ifrgaqvrys aeevrrsvrh lqrhelwgke tstvpdvqlq lprmygdnid ehfrllaqkq
      121 slpyleaaeg llrcqlpplp qrwawepgwt rygphgqaep vefpeeralv ldvevcvadg
      181 hcptlavavs phawyswcsr rlleqrysws shltladlip mespagasca skqdwtervv
      241 vghnvafdra fikeqyliqg skmrfldtms mhmaisgltg fqrslwmaak hgkrkglqqv
      301 kehmkktrsk aegpavtswd wvhvssinnl advhalyvgg eplekdarei fvkgtmadir
      361 snfqdlvsyc ardvqathev fqeqlplfme rcphpvtfag mlemgvsylp vngnwnryld
      421 daqgiyeelq kemkkslmnl andacqllhe hrykddpwlw dlewdiqefk qkknpgkkkk
      481 kgqdgksqls paavnaeesa qewqedpgpp seeeelkvsa sqlclqrlke tvalqpkrlq
      541 hlpghpgwyr klcprleeeg wvpgpslisl qmrvtpklmr lawdgfplhy sekhgwgylv
      601 pgrqdnlpva pvetdgpscp hrvienlyrq hclekgkeqp pgleaavede llvmdsstiw
      661 qkmeelsrie vdpeekmnka dqslvleeme elrraekksk psfhhgngpy ndvnipgcwf
      721 fklphkdgnd nnvgspfakd flpqmedgtl raavgrthgt raleinkmis fwrnahkris
      781 sqmvvwlkkg elprvvtrhp dyneednyga ilpqvvtagt vtrraveptw ltasnaradr
      841 vgselkamvq vppgyslvga dvdsqelwia avlgeaqfag mhgctafgwm tlqgkksnat
      901 dlhsktaatv gisrehakvf nygriygagq pfaerllmqf nhrltqqqar ekaqqmyavt
      961 kgirrfhlse egewlvtkld lavdraedgs vsaqdvqrlq reamkgsrre kkwnvveqrv
     1021 waggtesemf nklesialsp spqtpvlgch isralepamv kgefvtsrvn wvvqssavdy
     1081 lhlmlvamkw lfeefdingr fcisihdevr ylvqhqdryr aalalqitnl ltrcmfaykl
     1141 glqdlpqsva ffsavdidqc lrkevtmncv tpsnpmgmek ygipqgeald iyqiieitkg
     1201 slekq
//
LOCUS       XP_041325025            1203 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase subunit gamma-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325025
VERSION     XP_041325025.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469091.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1203
                     /product="DNA polymerase subunit gamma-1 isoform X2"
                     /calculated_mol_wt=136747
     Region          95..388
                     /region_name="DNApol_Exo"
                     /note="DNA mitochondrial polymerase exonuclease domain;
                     pfam18136"
                     /db_xref="CDD:465664"
     Region          405..>447
                     /region_name="DNA_pol_A"
                     /note="Family A polymerase primarily fills DNA gaps that
                     arise during DNA repair, recombination and replication;
                     cl02626"
                     /db_xref="CDD:470638"
     Region          756..1173
                     /region_name="DNA_pol_gammaA"
                     /note="Pol gammaA is a family A polymerase that is
                     responsible for DNA replication and repair in
                     mitochondria; cd08641"
                     /db_xref="CDD:176478"
     Site            order(764,768,771..772,818..820,822,824..827,859..860,898,
                     912,916,1065,1072,1103..1105)
                     /site_type="active"
                     /db_xref="CDD:176478"
     Site            order(764,768,771..772,818..820,822,824..827,924,
                     1064..1065,1068,1072,1103..1105)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:176478"
     Site            order(859..860,862,898,912,916,1105)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176478"
     CDS             1..1203
                     /gene="POLG"
                     /coded_by="XM_041469091.1:115..3726"
                     /db_xref="GeneID:121354443"
ORIGIN      
        1 mrrvpwmrpv rgcspqprrc sssssasrpl peepgqepaa sqrrmnplni qmlsrslheq
       61 ifrgaqvrys aeevrrsvrh lqrhelwgke tstvpdvqlq lprmygdnid ehfrllaqkq
      121 slpyleaaeg llrcqlpplp qrwawepgwt rygphgqaep vefpeeralv ldvevcvadg
      181 hcptlavavs phawyswcsr rlleqrysws shltladlip mespagasca skqdwtervv
      241 vghnvafdra fikeqyliqg skmrfldtms mhmaisgltg fqrslwmaak hgkrkglqqv
      301 kehmkktrsk aegpavtswd wvhvssinnl advhalyvgg eplekdarei fvkgtmadir
      361 snfqdlvsyc ardvqathev fqeqlplfme rcphpvtfag mlemgvsylp vngnwnryld
      421 daqgiyeelq kemkkslmnl andacqllhe hrykddpwlw dlewdiqefk qkknpgkkkk
      481 kgqdgksqls paavnaeesa qewqedpgpp seeeelkvsa sqlclqrlke tvalqpkrlq
      541 hlpghpgwyr klcprleeeg wvpgpslisl qmrvtpklmr lawdgfplhy sekhgwgylv
      601 pgrqdnlpva pvetdgpscp hrvienlyrq hclekgkeqp pgleaavede llvmdsstiw
      661 qkmeelsrie vdpeekmnka dqsleemeel rraekkskps fhhgngpynd vnipgcwffk
      721 lphkdgndnn vgspfakdfl pqmedgtlra avgrthgtra leinkmisfw rnahkrissq
      781 mvvwlkkgel prvvtrhpdy neednygail pqvvtagtvt rraveptwlt asnaradrvg
      841 selkamvqvp pgyslvgadv dsqelwiaav lgeaqfagmh gctafgwmtl qgkksnatdl
      901 hsktaatvgi srehakvfny griygagqpf aerllmqfnh rltqqqarek aqqmyavtkg
      961 irrfhlseeg ewlvtkldla vdraedgsvs aqdvqrlqre amkgsrrekk wnvveqrvwa
     1021 ggtesemfnk lesialspsp qtpvlgchis ralepamvkg efvtsrvnwv vqssavdylh
     1081 lmlvamkwlf eefdingrfc isihdevryl vqhqdryraa lalqitnllt rcmfayklgl
     1141 qdlpqsvaff savdidqclr kevtmncvtp snpmgmekyg ipqgealdiy qiieitkgsl
     1201 ekq
//
LOCUS       XP_041325027             776 aa            linear   VRT 06-MAY-2021
DEFINITION  immunoglobulin superfamily DCC subclass member 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325027
VERSION     XP_041325027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..776
                     /product="immunoglobulin superfamily DCC subclass member
                     3"
                     /calculated_mol_wt=84720
     Region          29..123
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          47..51
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          60..64
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          82..86
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          102..107
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          116..119
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          133..201
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          144..148
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          157..161
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          180..184
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          194..199
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          232..314
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          243..247
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          256..260
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          278..282
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          292..296
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          319..405
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          335..339
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          348..352
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          371..375
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          385..390
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          <386..>588
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          398..401
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..776
                     /gene="IGDCC3"
                     /coded_by="XM_041469093.1:64..2394"
                     /db_xref="GeneID:121354444"
ORIGIN      
        1 mappgsalpa cllgllllvc rgdfgrssel afvvepsddi avqeqplily cqvegiqpit
       61 itwrkngvmi vdsenafmla ngslyvsrfq rvrgdgssde geydcmaqnh ygllvsrkak
      121 iqaatmsdfh ihpqnavvee ggvarfqcqi hglpepvilw hknsmpvntd nerytllpkg
      181 vlqitglrae dsgifhcvat nianvkfsre arltvsgshs tvykdpmilv gpenltltvh
      241 qtavleciat gnprpivsws rldgrpigve giqvlgtgnl misdltvqhs giyvcaankp
      301 gtrvrrtaqg slvvqapaef vqhpqsisrp vgttaiftcv aqgepppqit wlrngqilet
      361 sdhiklknnn stlsiyginq adeaiyqcla ensagstqas arltvlwadg lpsppqsvra
      421 etvsattiqv swekplqntk eiigyvlhir kaadpvemey qeavskstfq qlvtdlepst
      481 sysfyikayt srgaskasev tvvstlgevp ampslfikvi nsttvqatwe psiklgqheg
      541 fklyyrkvhl sqytgpvlla snitaynith ldasvvyevk llaynqhgdg nstvrfvslr
      601 etvertvlnp pcdcmkdeqn nktsttgiii gihigvtcii fcilflmfgy rgrllmcknv
      661 qeqlstpqip rsqrsatglv lngatrrdrd drdlngkqld mnelerlfpa spsqeqqekg
      721 itsahslpap hdetqistlp ldefsiieeq pdplpknphg sspaapapnh gpaneg
//
LOCUS       XP_041325028            1879 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Va isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325028
VERSION     XP_041325028.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469094.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1879
                     /product="unconventional myosin-Va isoform X1"
                     /calculated_mol_wt=218405
     Region          7..1374
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          83..752
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            686..696
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(707..717,737..752)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          1505..1879
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1522..1524,1527..1530,1700..1701,1859,1864,1866,
                     1868..1870)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1550,1553..1554,1557..1558,1561..1562,1565,1596,
                     1614..1619,1621..1622,1625)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1879
                     /gene="MYO5A"
                     /coded_by="XM_041469094.1:296..5935"
                     /db_xref="GeneID:121354445"
ORIGIN      
        1 maaselytky arvwipdpee vwksaellkd ykpgdkvlql rleegkdley sldpktkelp
       61 plrnpdilvg endltalsyl hepavlhnlk vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasaa lpefktlrlg nanyfhytkq ggspvidgvd
      301 dakemvntrq actllgisds yqmgifrila gilhlgnvef asrdsdsctv ppkhepltif
      361 cdlmgveyee mahwlchrkl atatetyikp isklhainar dalakhiyan lfnwivdhvn
      421 kalhatvkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie akmgvldlld eeckmpkgsd dswaqklynt hlnkcalfek
      541 prmsnkafii khfadkveyq cegfleknkd tvyeeqirvl ksskkfkllp elfqdeekvl
      601 sptsaapsgr vplsrmpvkp akarpgqask ehkktvghqf rnslhllmet lnattphyvr
      661 cikpndfkfp ftfdekravq qlracgvlet irisaagfps rwtyqeffsr yrvlmkqkdv
      721 lgdrkqtckn vlekliqdkd kyqfgktkif fragqvayle kiradklraa ciriqktirg
      781 wlmrkkymrm rkaaitiqrh vrgyqarcya kflrrtraai tiqkfqrmyv vrkryqcmrd
      841 atialqallr gymvrnkyqm mlrehksvvi qkhvrgwlar rryrrtlqai vylqccyrrm
      901 makrelkklk iearsveryk klhiglenki mqlqrkideq nkeyksllek mnnleityst
      961 eteklrsdve rlrmseeeak natnrvlslq eeiaklrkel hqtqsekksi eeradkykhe
     1021 teqlvselke qnsllkteke elnrrihdqa reitesmekk lveetkqlel dlnderlryq
     1081 nllnefsrle eryddlkdem nlmvsipkpg hkrtdsthss neseytfsse iteaedlplr
     1141 meqepsekka aldmslflkl qkrvseleqe kqslqdeldr keeqalraka keeerppirg
     1201 aeleyeslkr qelesenkkl knelnelqka ltetrapevt apgapayrvl ldqltsvsee
     1261 levrkeevli lrsqlvsqke aiqpkhtmtd atilledvqk mkdkgeiaqa yiglketnrq
     1321 spqdyhmlne dgelwlayeg lkqanrlles qlqsqkkshe neleslrgei qslkeennrq
     1381 qqllaqnlql ppearieasl qheitrltne nlfyeelyad dpkkyqlyri slykrmidlm
     1441 eqlekqdktv rklkkqlkvf akkigelevg qmenispgqi idepirpvni prkekdfqgm
     1501 leykkedeqk lvknlilelk prgvavnlip glpayilfmc vrhadylndd qkvrslltst
     1561 ingikkvlkk rgddfetvsf wlsntcrflh clkqysgeeg fmkhntprqn ehcltnfdla
     1621 eyrqvlsdla iqiyqqlvrv lenilqpmiv sgmlehetiq gvsgvkptgl rkrtssiade
     1681 gtytldsiir qlnsfhsvmc qhgmdpelik qvvkqmfyii gavtlnnlll rkdmcswskg
     1741 mqirynvsql eewlrdknlm nsgaketlep liqaaqllqv kkktdedaea icsmcnaltt
     1801 aqivkvlnly tpvnefeerv lvsfirtiqv rlrdrkdspq llmdakhifp vtfpfnpssl
     1861 aletiqipas lglgfisrv
//
LOCUS       XP_041325029            1854 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Va isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325029
VERSION     XP_041325029.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469095.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1854
                     /product="unconventional myosin-Va isoform X2"
                     /calculated_mol_wt=215177
     Region          7..1374
                     /region_name="COG5022"
                     /note="Myosin heavy chain [General function prediction
                     only]"
                     /db_xref="CDD:227355"
     Region          83..752
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            686..696
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(707..717,737..752)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          1480..1854
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1497..1499,1502..1505,1675..1676,1834,1839,1841,
                     1843..1845)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1525,1528..1529,1532..1533,1536..1537,1540,1571,
                     1589..1594,1596..1597,1600)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1854
                     /gene="MYO5A"
                     /coded_by="XM_041469095.1:296..5860"
                     /db_xref="GeneID:121354445"
ORIGIN      
        1 maaselytky arvwipdpee vwksaellkd ykpgdkvlql rleegkdley sldpktkelp
       61 plrnpdilvg endltalsyl hepavlhnlk vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasaa lpefktlrlg nanyfhytkq ggspvidgvd
      301 dakemvntrq actllgisds yqmgifrila gilhlgnvef asrdsdsctv ppkhepltif
      361 cdlmgveyee mahwlchrkl atatetyikp isklhainar dalakhiyan lfnwivdhvn
      421 kalhatvkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie akmgvldlld eeckmpkgsd dswaqklynt hlnkcalfek
      541 prmsnkafii khfadkveyq cegfleknkd tvyeeqirvl ksskkfkllp elfqdeekvl
      601 sptsaapsgr vplsrmpvkp akarpgqask ehkktvghqf rnslhllmet lnattphyvr
      661 cikpndfkfp ftfdekravq qlracgvlet irisaagfps rwtyqeffsr yrvlmkqkdv
      721 lgdrkqtckn vlekliqdkd kyqfgktkif fragqvayle kiradklraa ciriqktirg
      781 wlmrkkymrm rkaaitiqrh vrgyqarcya kflrrtraai tiqkfqrmyv vrkryqcmrd
      841 atialqallr gymvrnkyqm mlrehksvvi qkhvrgwlar rryrrtlqai vylqccyrrm
      901 makrelkklk iearsveryk klhiglenki mqlqrkideq nkeyksllek mnnleityst
      961 eteklrsdve rlrmseeeak natnrvlslq eeiaklrkel hqtqsekksi eeradkykhe
     1021 teqlvselke qnsllkteke elnrrihdqa reitesmekk lveetkqlel dlnderlryq
     1081 nllnefsrle eryddlkdem nlmvsipkpg hkrtdsthss neseytfsse iteaedlplr
     1141 meqepsekka aldmslflkl qkrvseleqe kqslqdeldr keeqalraka keeerppirg
     1201 aeleyeslkr qelesenkkl knelnelqka ltetrapevt apgapayrvl ldqltsvsee
     1261 levrkeevli lrsqlvsqke aiqpkhtmtd atilledvqk mkdkgeiaqa yiglketnrq
     1321 spqdyhmlne dgelwlayeg lkqanrlles qlqsqkkshe neleslrgei qslkeennrq
     1381 qqllaqnlql ppearieasl qheitrltne nldlmeqlek qdktvrklkk qlkvfakkig
     1441 elevgqmeni spgqiidepi rpvniprkek dfqgmleykk edeqklvknl ilelkprgva
     1501 vnlipglpay ilfmcvrhad ylnddqkvrs lltstingik kvlkkrgddf etvsfwlsnt
     1561 crflhclkqy sgeegfmkhn tprqnehclt nfdlaeyrqv lsdlaiqiyq qlvrvlenil
     1621 qpmivsgmle hetiqgvsgv kptglrkrts siadegtytl dsiirqlnsf hsvmcqhgmd
     1681 pelikqvvkq mfyiigavtl nnlllrkdmc swskgmqiry nvsqleewlr dknlmnsgak
     1741 etlepliqaa qllqvkkktd edaeaicsmc nalttaqivk vlnlytpvne feervlvsfi
     1801 rtiqvrlrdr kdspqllmda khifpvtfpf npsslaleti qipaslglgf isrv
//
LOCUS       XP_041325030            1852 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Va isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325030
VERSION     XP_041325030.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469096.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1852
                     /product="unconventional myosin-Va isoform X3"
                     /calculated_mol_wt=215217
     Region          83..752
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            686..696
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(707..717,737..752)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          766..787
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          789..811
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          814..836
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          863..884
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          903..>1276
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1139..>1441
                     /region_name="SMC_N"
                     /note="RecF/RecN/SMC N terminal domain; cl47134"
                     /db_xref="CDD:481474"
     Region          1478..1852
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1495..1497,1500..1503,1673..1674,1832,1837,1839,
                     1841..1843)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1523,1526..1527,1530..1531,1534..1535,1538,1569,
                     1587..1592,1594..1595,1598)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1852
                     /gene="MYO5A"
                     /coded_by="XM_041469096.1:296..5854"
                     /db_xref="GeneID:121354445"
ORIGIN      
        1 maaselytky arvwipdpee vwksaellkd ykpgdkvlql rleegkdley sldpktkelp
       61 plrnpdilvg endltalsyl hepavlhnlk vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasaa lpefktlrlg nanyfhytkq ggspvidgvd
      301 dakemvntrq actllgisds yqmgifrila gilhlgnvef asrdsdsctv ppkhepltif
      361 cdlmgveyee mahwlchrkl atatetyikp isklhainar dalakhiyan lfnwivdhvn
      421 kalhatvkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie akmgvldlld eeckmpkgsd dswaqklynt hlnkcalfek
      541 prmsnkafii khfadkveyq cegfleknkd tvyeeqirvl ksskkfkllp elfqdeekvl
      601 sptsaapsgr vplsrmpvkp akarpgqask ehkktvghqf rnslhllmet lnattphyvr
      661 cikpndfkfp ftfdekravq qlracgvlet irisaagfps rwtyqeffsr yrvlmkqkdv
      721 lgdrkqtckn vlekliqdkd kyqfgktkif fragqvayle kiradklraa ciriqktirg
      781 wlmrkkymrm rkaaitiqrh vrgyqarcya kflrrtraai tiqkfqrmyv vrkryqcmrd
      841 atialqallr gymvrnkyqm mlrehksvvi qkhvrgwlar rryrrtlqai vylqccyrrm
      901 makrelkklk iearsveryk klhiglenki mqlqrkideq nkeyksllek mnnleityst
      961 eteklrsdve rlrmseeeak natnrvlslq eeiaklrkel hqtqsekksi eeradkykhe
     1021 teqlvselke qnsllkteke elnrrihdqa reitesmekk lveetkqlel dlnderlryq
     1081 nllnefsrle eryddlkdem nlmvsipkpg hkrtdsthss neseytfsse iteaedlplr
     1141 meqepsekka aldmslflkl qkrvseleqe kqslqdeldr keeqalraka keeerppirg
     1201 aeleyeslkr qelesenkkl knelnelqka ltetrapevt apgapayrvl ldqltsvsee
     1261 levrkeevli lrsqlvsqke aiqpkhtmtd atilledvqk mkdkgeiaqa yiglketnrl
     1321 lesqlqsqkk sheneleslr geiqslkeen nrqqqllaqn lqlppearie aslqheitrl
     1381 tnenlfyeel yaddpkkyql yrislykrmi dlmeqlekqd ktvrklkkql kvfakkigel
     1441 evgqmenisp gqiidepirp vniprkekdf qgmleykked eqklvknlil elkprgvavn
     1501 lipglpayil fmcvrhadyl nddqkvrsll tstingikkv lkkrgddfet vsfwlsntcr
     1561 flhclkqysg eegfmkhntp rqnehcltnf dlaeyrqvls dlaiqiyqql vrvlenilqp
     1621 mivsgmlehe tiqgvsgvkp tglrkrtssi adegtytlds iirqlnsfhs vmcqhgmdpe
     1681 likqvvkqmf yiigavtlnn lllrkdmcsw skgmqirynv sqleewlrdk nlmnsgaket
     1741 lepliqaaql lqvkkktded aeaicsmcna lttaqivkvl nlytpvnefe ervlvsfirt
     1801 iqvrlrdrkd spqllmdakh ifpvtfpfnp sslaletiqi paslglgfis rv
//
LOCUS       XP_041325032            1827 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Va isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325032
VERSION     XP_041325032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1827
                     /product="unconventional myosin-Va isoform X4"
                     /calculated_mol_wt=211988
     Region          83..752
                     /region_name="MYSc_Myo5"
                     /note="class V myosin, motor domain; cd01380"
                     /db_xref="CDD:276831"
     Site            order(111..119,163..170,209..219,437..442)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276831"
     Site            111..119
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276831"
     Site            163..170
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276831"
     Site            209..219
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276831"
     Site            437..445
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276831"
     Site            order(466..477,480..489)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276831"
     Site            686..696
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276831"
     Site            order(707..717,737..752)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276831"
     Region          766..787
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          789..811
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          814..836
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          863..884
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          <903..>1476
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1453..1827
                     /region_name="Myo5a_CBD"
                     /note="Cargo binding domain of myosin 5a; cd15478"
                     /db_xref="CDD:271262"
     Site            order(1470..1472,1475..1478,1648..1649,1807,1812,1814,
                     1816..1818)
                     /site_type="other"
                     /note="RILPL2 interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     Site            order(1498,1501..1502,1505..1506,1509..1510,1513,1544,
                     1562..1567,1569..1570,1573)
                     /site_type="other"
                     /note="melanophilin interface [polypeptide binding]"
                     /db_xref="CDD:271262"
     CDS             1..1827
                     /gene="MYO5A"
                     /coded_by="XM_041469098.1:296..5779"
                     /db_xref="GeneID:121354445"
ORIGIN      
        1 maaselytky arvwipdpee vwksaellkd ykpgdkvlql rleegkdley sldpktkelp
       61 plrnpdilvg endltalsyl hepavlhnlk vrfidskliy tycgivlvai npyeqlpiyg
      121 ediinaysgq nmgdmdphif avaeeaykqm ardernqsii vsgesgagkt vsakyamryf
      181 atvsgsasea nveekvlasn pimesignak ttrndnssrf gkyieigfdk ryriiganmr
      241 tylleksrvv fqaeeernyh ifyqlcasaa lpefktlrlg nanyfhytkq ggspvidgvd
      301 dakemvntrq actllgisds yqmgifrila gilhlgnvef asrdsdsctv ppkhepltif
      361 cdlmgveyee mahwlchrkl atatetyikp isklhainar dalakhiyan lfnwivdhvn
      421 kalhatvkqh sfigvldiyg fetfeinsfe qfcinyanek lqqqfnmhvf kleqeeymke
      481 qipwtlidfy dnqpcinlie akmgvldlld eeckmpkgsd dswaqklynt hlnkcalfek
      541 prmsnkafii khfadkveyq cegfleknkd tvyeeqirvl ksskkfkllp elfqdeekvl
      601 sptsaapsgr vplsrmpvkp akarpgqask ehkktvghqf rnslhllmet lnattphyvr
      661 cikpndfkfp ftfdekravq qlracgvlet irisaagfps rwtyqeffsr yrvlmkqkdv
      721 lgdrkqtckn vlekliqdkd kyqfgktkif fragqvayle kiradklraa ciriqktirg
      781 wlmrkkymrm rkaaitiqrh vrgyqarcya kflrrtraai tiqkfqrmyv vrkryqcmrd
      841 atialqallr gymvrnkyqm mlrehksvvi qkhvrgwlar rryrrtlqai vylqccyrrm
      901 makrelkklk iearsveryk klhiglenki mqlqrkideq nkeyksllek mnnleityst
      961 eteklrsdve rlrmseeeak natnrvlslq eeiaklrkel hqtqsekksi eeradkykhe
     1021 teqlvselke qnsllkteke elnrrihdqa reitesmekk lveetkqlel dlnderlryq
     1081 nllnefsrle eryddlkdem nlmvsipkpg hkrtdsthss neseytfsse iteaedlplr
     1141 meqepsekka aldmslflkl qkrvseleqe kqslqdeldr keeqalraka keeerppirg
     1201 aeleyeslkr qelesenkkl knelnelqka ltetrapevt apgapayrvl ldqltsvsee
     1261 levrkeevli lrsqlvsqke aiqpkhtmtd atilledvqk mkdkgeiaqa yiglketnrl
     1321 lesqlqsqkk sheneleslr geiqslkeen nrqqqllaqn lqlppearie aslqheitrl
     1381 tnenldlmeq lekqdktvrk lkkqlkvfak kigelevgqm enispgqiid epirpvnipr
     1441 kekdfqgmle ykkedeqklv knlilelkpr gvavnlipgl payilfmcvr hadylnddqk
     1501 vrslltstin gikkvlkkrg ddfetvsfwl sntcrflhcl kqysgeegfm khntprqneh
     1561 cltnfdlaey rqvlsdlaiq iyqqlvrvle nilqpmivsg mlehetiqgv sgvkptglrk
     1621 rtssiadegt ytldsiirql nsfhsvmcqh gmdpelikqv vkqmfyiiga vtlnnlllrk
     1681 dmcswskgmq irynvsqlee wlrdknlmns gaketlepli qaaqllqvkk ktdedaeaic
     1741 smcnalttaq ivkvlnlytp vnefeervlv sfirtiqvrl rdrkdspqll mdakhifpvt
     1801 fpfnpsslal etiqipaslg lgfisrv
//
LOCUS       XP_041325033             127 aa            linear   VRT 06-MAY-2021
DEFINITION  neuromedin-B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325033
VERSION     XP_041325033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..127
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..127
                     /product="neuromedin-B isoform X1"
                     /calculated_mol_wt=13938
     Region          39..52
                     /region_name="Bombesin"
                     /note="Bombesin-like peptide; pfam02044"
                     /db_xref="CDD:280257"
     CDS             1..127
                     /gene="NMB"
                     /coded_by="XM_041469099.1:139..522"
                     /db_xref="GeneID:121354446"
ORIGIN      
        1 malrclllll cgaalgpavh ldfaehrsqa akikvnprgn lwatghfmgk ksvtgsqhle
       61 taeepavpvv fgpslralle dmmelltrel lkillqerll denqgkydlt gqetglltkv
      121 lekyfsn
//
LOCUS       XP_041325034             102 aa            linear   VRT 06-MAY-2021
DEFINITION  neuromedin-B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325034
VERSION     XP_041325034.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469100.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..102
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..102
                     /product="neuromedin-B isoform X2"
                     /calculated_mol_wt=11303
     CDS             1..102
                     /gene="NMB"
                     /coded_by="XM_041469100.1:786..1094"
                     /db_xref="GeneID:121354446"
ORIGIN      
        1 mekveartwr dlgtgvglsg hfmgkksvtg sqhletaeep avpvvfgpsl ralledmmel
       61 ltrellkill qerlldenqg kydltgqetg lltkvlekyf sn
//
LOCUS       XP_041325035             111 aa            linear   VRT 06-MAY-2021
DEFINITION  PCNA-associated factor [Pyrgilauda ruficollis].
ACCESSION   XP_041325035
VERSION     XP_041325035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..111
                     /product="PCNA-associated factor"
                     /calculated_mol_wt=11681
     Region          1..97
                     /region_name="PAF"
                     /note="PCNA-associated factor histone like domain;
                     pfam15715"
                     /db_xref="CDD:464819"
     CDS             1..111
                     /gene="PCLAF"
                     /coded_by="XM_041469101.1:41..376"
                     /db_xref="GeneID:121354447"
ORIGIN      
        1 martkvdqrg rafrkvlvar aprkalgsss ssssssagpp lpgrrgdrrp vglnrvcvrp
       61 vpawqrgisd flrlpakesr apdgdapgts glearplpld paeegaclee e
//
LOCUS       XP_041325036            1466 aa            linear   VRT 06-MAY-2021
DEFINITION  neogenin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325036
VERSION     XP_041325036.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469102.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1466
                     /product="neogenin isoform X1"
                     /calculated_mol_wt=159363
     Region          47..143
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          47..50
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          53..59
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          63..73
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          77..83
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          85..88
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          95..100
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          102..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          120..127
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          132..143
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          147..216
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          247..332
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          261..265
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          274..278
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          298..302
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          312..317
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          325..328
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..422
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          339..342
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          344..348
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          351..360
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          365..371
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          373..376
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          381..385
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          389..393
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          401..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          412..422
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          425..930
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          970..1065
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1054..1055,1057..1058)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1172..1466
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1466
                     /gene="NEO1"
                     /coded_by="XM_041469102.1:223..4623"
                     /db_xref="GeneID:121354449"
ORIGIN      
        1 maarrarrll gslciallfa qtaptgaaar sgsrslltes lvrtftpfyf lvepldvlsv
       61 rgasvimncs aqcetpprie wkkdgsflnl vsddrrqllp dgsllinsvv hskhnkpdeg
      121 yyqcvatvds lgtivsrtak ltvaglprft sqpeptsvhr ggsavlgcev taelapllrw
      181 ererqalapg prvlqlpgga llltnasdtd aglyrcaldt ggtpkysdea elkvlpdaee
      241 pqrlvllkap sslsrlpgqs avfpcvaaaf ppplirwtrn geelptdgsg rfqllpggvl
      301 eirdvaeada gtftciaesg ndtleaqael avqvpptflk rpaniyahes mdivfecevt
      361 gkptptvkwv kngdvvipsd yfkivkehnl qvlglvksde gfyqciaend vgnaqagaql
      421 iildldvaip tlpptsltsa tndhlapata gplpsaprdv vatlvstrfi rltwrppasd
      481 pqgdnltysi fytkeginre rventsrpge tqvmiqnlmp etvyvfrvva qnrhgpgess
      541 allkvatqpe vqlpgpapni rafsssptsv tvtwetplsg ngdiqnykly ymekgqhteq
      601 dvdvaglsht vaglkkftey sfrvvaynkh gpgvsthdvv vrtlsdvpsa ppqnltlevr
      661 nsksillqwq pppagtqsgq itgykiryrk vsrksdvtes vggtqlsqli eglergteys
      721 frvaamting tgpatdwvsa etfesdldes rvpevpsslh vrplvtsivv swtppenqdv
      781 vvrgyaigyg igsphaqtik vdykqryyti enldpsshyv itlkafnnvg egiplyesav
      841 trphsdtsev dlfvinapyt pvpdpspmmp pvgvqasils hdtiritwad nslpknqkit
      901 darfytvrwk tnipantkyk tanattlsyl vtglkpntly efsvmvtkgr rsstwsmtah
      961 gttfelvpts ppkdvtvvsk egkprtiivn wqppseangk itgyiiyyst dvnaeihdwv
     1021 iepvvgnrlt hqiqeltldt pyffkiqarn skgmgpmsea vqfrtpkaes sdkmpndqas
     1081 gsagkgsrpm dlgpdykppl ggsnsphgsp tspldsnmll viivsvgvit ivivvivavf
     1141 ctrrttshqk kkraacksvn gshkykgnsk dvkppdlwih herlelkpid kspdpnpimt
     1201 dtpiprnsqd itpvdnsmds nihqrrnsyr ghesedsmst lagrrgmrpk mmmpfdsqpp
     1261 qpvisahpih sldpphhhfh sgslasptrs flhhqlspwp lgsamshsdr adstesvrnt
     1321 pstdtmpaas avpsaelpea egpflpaeee pqgpptahvr pshplksfav pavpnaggpf
     1381 dpalpstpll tqqapghplh avktasigtl grtrppmpvv vpsapevqet trmledsess
     1441 yepdeltkem ahleglmkdl naitta
//
LOCUS       XP_041325037            1455 aa            linear   VRT 06-MAY-2021
DEFINITION  neogenin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325037
VERSION     XP_041325037.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469103.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1455
                     /product="neogenin isoform X2"
                     /calculated_mol_wt=158160
     Region          47..143
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          47..50
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          53..59
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          63..73
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          77..83
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          85..88
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          95..100
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          102..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          120..127
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          132..143
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          147..216
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          247..332
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          261..265
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          274..278
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          298..302
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          312..317
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          325..328
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..422
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          339..342
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          344..348
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          351..360
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          365..371
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          373..376
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          381..385
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          389..393
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          401..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          412..422
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          425..930
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          970..1065
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1054..1055,1057..1058)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1161..1455
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1455
                     /gene="NEO1"
                     /coded_by="XM_041469103.1:223..4590"
                     /db_xref="GeneID:121354449"
ORIGIN      
        1 maarrarrll gslciallfa qtaptgaaar sgsrslltes lvrtftpfyf lvepldvlsv
       61 rgasvimncs aqcetpprie wkkdgsflnl vsddrrqllp dgsllinsvv hskhnkpdeg
      121 yyqcvatvds lgtivsrtak ltvaglprft sqpeptsvhr ggsavlgcev taelapllrw
      181 ererqalapg prvlqlpgga llltnasdtd aglyrcaldt ggtpkysdea elkvlpdaee
      241 pqrlvllkap sslsrlpgqs avfpcvaaaf ppplirwtrn geelptdgsg rfqllpggvl
      301 eirdvaeada gtftciaesg ndtleaqael avqvpptflk rpaniyahes mdivfecevt
      361 gkptptvkwv kngdvvipsd yfkivkehnl qvlglvksde gfyqciaend vgnaqagaql
      421 iildldvaip tlpptsltsa tndhlapata gplpsaprdv vatlvstrfi rltwrppasd
      481 pqgdnltysi fytkeginre rventsrpge tqvmiqnlmp etvyvfrvva qnrhgpgess
      541 allkvatqpe vqlpgpapni rafsssptsv tvtwetplsg ngdiqnykly ymekgqhteq
      601 dvdvaglsht vaglkkftey sfrvvaynkh gpgvsthdvv vrtlsdvpsa ppqnltlevr
      661 nsksillqwq pppagtqsgq itgykiryrk vsrksdvtes vggtqlsqli eglergteys
      721 frvaamting tgpatdwvsa etfesdldes rvpevpsslh vrplvtsivv swtppenqdv
      781 vvrgyaigyg igsphaqtik vdykqryyti enldpsshyv itlkafnnvg egiplyesav
      841 trphsdtsev dlfvinapyt pvpdpspmmp pvgvqasils hdtiritwad nslpknqkit
      901 darfytvrwk tnipantkyk tanattlsyl vtglkpntly efsvmvtkgr rsstwsmtah
      961 gttfelvpts ppkdvtvvsk egkprtiivn wqppseangk itgyiiyyst dvnaeihdwv
     1021 iepvvgnrlt hqiqeltldt pyffkiqarn skgmgpmsea vqfrtpkasg sagkgsrpmd
     1081 lgpdykpplg gsnsphgspt spldsnmllv iivsvgviti vivvivavfc trrttshqkk
     1141 kraacksvng shkykgnskd vkppdlwihh erlelkpidk spdpnpimtd tpiprnsqdi
     1201 tpvdnsmdsn ihqrrnsyrg hesedsmstl agrrgmrpkm mmpfdsqppq pvisahpihs
     1261 ldpphhhfhs gslasptrsf lhhqlspwpl gsamshsdra dstesvrntp stdtmpaasa
     1321 vpsaelpeae gpflpaeeep qgpptahvrp shplksfavp avpnaggpfd palpstpllt
     1381 qqapghplha vktasigtlg rtrppmpvvv psapevqett rmledsessy epdeltkema
     1441 hleglmkdln aitta
//
LOCUS       XP_041325038            1450 aa            linear   VRT 06-MAY-2021
DEFINITION  neogenin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325038
VERSION     XP_041325038.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469104.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1450
                     /product="neogenin isoform X3"
                     /calculated_mol_wt=157600
     Region          47..143
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          47..50
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          53..59
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          63..73
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          77..83
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          85..88
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          95..100
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          102..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          120..127
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          132..143
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          147..216
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          247..332
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          261..265
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          274..278
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          298..302
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          312..317
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          325..328
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..422
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          339..342
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          344..348
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          351..360
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          365..371
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          373..376
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          381..385
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          389..393
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          401..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          412..422
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          425..914
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          954..1049
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1038..1039,1041..1042)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1156..1450
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1450
                     /gene="NEO1"
                     /coded_by="XM_041469104.1:223..4575"
                     /db_xref="GeneID:121354449"
ORIGIN      
        1 maarrarrll gslciallfa qtaptgaaar sgsrslltes lvrtftpfyf lvepldvlsv
       61 rgasvimncs aqcetpprie wkkdgsflnl vsddrrqllp dgsllinsvv hskhnkpdeg
      121 yyqcvatvds lgtivsrtak ltvaglprft sqpeptsvhr ggsavlgcev taelapllrw
      181 ererqalapg prvlqlpgga llltnasdtd aglyrcaldt ggtpkysdea elkvlpdaee
      241 pqrlvllkap sslsrlpgqs avfpcvaaaf ppplirwtrn geelptdgsg rfqllpggvl
      301 eirdvaeada gtftciaesg ndtleaqael avqvpptflk rpaniyahes mdivfecevt
      361 gkptptvkwv kngdvvipsd yfkivkehnl qvlglvksde gfyqciaend vgnaqagaql
      421 iildldvaip tlpptsltsa tndhlapata gplpsaprdv vatlvstrfi rltwrppasd
      481 pqgdnltysi fytkeginre rventsrpge tqvmiqnlmp etvyvfrvva qnrhgpgess
      541 allkvatqpe vqlpgpapni rafsssptsv tvtwetplsg ngdiqnykly ymekgqhteq
      601 dvdvaglsht vaglkkftey sfrvvaynkh gpgvsthdvv vrtlsdvpsa ppqnltlevr
      661 nsksillqwq pppagtqsgq itgykiryrk vsrksdvtes vggtqlsqli eglergteys
      721 frvaamting tgpatdwvsa etfesdldes rvpevpsslh vrplvtsivv swtppenqdv
      781 vvrgyaigyg igsphaqtik vdykqryyti enldpsshyv itlkafnnvg egiplyesav
      841 trphsvpdps pmmppvgvqa silshdtiri twadnslpkn qkitdarfyt vrwktnipan
      901 tkyktanatt lsylvtglkp ntlyefsvmv tkgrrsstws mtahgttfel vptsppkdvt
      961 vvskegkprt iivnwqppse angkitgyii yystdvnaei hdwviepvvg nrlthqiqel
     1021 tldtpyffki qarnskgmgp mseavqfrtp kaessdkmpn dqasgsagkg srpmdlgpdy
     1081 kpplggsnsp hgsptsplds nmllviivsv gvitivivvi vavfctrrtt shqkkkraac
     1141 ksvngshkyk gnskdvkppd lwihherlel kpidkspdpn pimtdtpipr nsqditpvdn
     1201 smdsnihqrr nsyrghesed smstlagrrg mrpkmmmpfd sqppqpvisa hpihsldpph
     1261 hhfhsgslas ptrsflhhql spwplgsams hsdradstes vrntpstdtm paasavpsae
     1321 lpeaegpflp aeeepqgppt ahvrpshplk sfavpavpna ggpfdpalps tplltqqapg
     1381 hplhavktas igtlgrtrpp mpvvvpsape vqettrmled sessyepdel tkemahlegl
     1441 mkdlnaitta
//
LOCUS       XP_041325039            1446 aa            linear   VRT 06-MAY-2021
DEFINITION  neogenin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325039
VERSION     XP_041325039.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469105.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1446
                     /product="neogenin isoform X4"
                     /calculated_mol_wt=157318
     Region          47..143
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          47..50
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          53..59
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          63..73
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          77..83
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          85..88
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          95..100
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          102..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          120..127
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          132..143
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          147..216
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          247..332
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          261..265
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          274..278
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          298..302
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          312..317
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          325..328
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..422
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          339..342
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          344..348
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          351..360
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          365..371
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          373..376
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          381..385
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          389..393
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          401..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          412..422
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          419..910
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          950..1045
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1034..1035,1037..1038)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1152..1446
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1446
                     /gene="NEO1"
                     /coded_by="XM_041469105.1:223..4563"
                     /db_xref="GeneID:121354449"
ORIGIN      
        1 maarrarrll gslciallfa qtaptgaaar sgsrslltes lvrtftpfyf lvepldvlsv
       61 rgasvimncs aqcetpprie wkkdgsflnl vsddrrqllp dgsllinsvv hskhnkpdeg
      121 yyqcvatvds lgtivsrtak ltvaglprft sqpeptsvhr ggsavlgcev taelapllrw
      181 ererqalapg prvlqlpgga llltnasdtd aglyrcaldt ggtpkysdea elkvlpdaee
      241 pqrlvllkap sslsrlpgqs avfpcvaaaf ppplirwtrn geelptdgsg rfqllpggvl
      301 eirdvaeada gtftciaesg ndtleaqael avqvpptflk rpaniyahes mdivfecevt
      361 gkptptvkwv kngdvvipsd yfkivkehnl qvlglvksde gfyqciaend vgnaqagaql
      421 iildlapata gplpsaprdv vatlvstrfi rltwrppasd pqgdnltysi fytkeginre
      481 rventsrpge tqvmiqnlmp etvyvfrvva qnrhgpgess allkvatqpe vqlpgpapni
      541 rafsssptsv tvtwetplsg ngdiqnykly ymekgqhteq dvdvaglsht vaglkkftey
      601 sfrvvaynkh gpgvsthdvv vrtlsdvpsa ppqnltlevr nsksillqwq pppagtqsgq
      661 itgykiryrk vsrksdvtes vggtqlsqli eglergteys frvaamting tgpatdwvsa
      721 etfesdldes rvpevpsslh vrplvtsivv swtppenqdv vvrgyaigyg igsphaqtik
      781 vdykqryyti enldpsshyv itlkafnnvg egiplyesav trphsdtsev dlfvinapyt
      841 pvpdpspmmp pvgvqasils hdtiritwad nslpknqkit darfytvrwk tnipantkyk
      901 tanattlsyl vtglkpntly efsvmvtkgr rsstwsmtah gttfelvpts ppkdvtvvsk
      961 egkprtiivn wqppseangk itgyiiyyst dvnaeihdwv iepvvgnrlt hqiqeltldt
     1021 pyffkiqarn skgmgpmsea vqfrtpkaes sdkmpndqas gsagkgsrpm dlgpdykppl
     1081 ggsnsphgsp tspldsnmll viivsvgvit ivivvivavf ctrrttshqk kkraacksvn
     1141 gshkykgnsk dvkppdlwih herlelkpid kspdpnpimt dtpiprnsqd itpvdnsmds
     1201 nihqrrnsyr ghesedsmst lagrrgmrpk mmmpfdsqpp qpvisahpih sldpphhhfh
     1261 sgslasptrs flhhqlspwp lgsamshsdr adstesvrnt pstdtmpaas avpsaelpea
     1321 egpflpaeee pqgpptahvr pshplksfav pavpnaggpf dpalpstpll tqqapghplh
     1381 avktasigtl grtrppmpvv vpsapevqet trmledsess yepdeltkem ahleglmkdl
     1441 naitta
//
LOCUS       XP_041325041            1435 aa            linear   VRT 06-MAY-2021
DEFINITION  neogenin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325041
VERSION     XP_041325041.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469107.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1435
                     /product="neogenin isoform X5"
                     /calculated_mol_wt=156115
     Region          47..143
                     /region_name="IgI_1_Neogenin_like"
                     /note="First immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05722"
                     /db_xref="CDD:409387"
     Region          47..50
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409387"
     Region          53..59
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409387"
     Region          63..73
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409387"
     Region          77..83
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409387"
     Region          85..88
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409387"
     Region          95..100
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409387"
     Region          102..108
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409387"
     Region          120..127
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409387"
     Region          132..143
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409387"
     Region          147..216
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          247..332
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          261..265
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          274..278
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          298..302
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          312..317
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          325..328
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          339..422
                     /region_name="IgI_4_Neogenin_like"
                     /note="Fourth immunoglobulin (Ig)-like domain in neogenin,
                     and similar domains; member of the I-set of Ig superfamily
                     (IgSF) domains; cd05723"
                     /db_xref="CDD:409388"
     Region          339..342
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409388"
     Region          344..348
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409388"
     Region          351..360
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409388"
     Region          365..371
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409388"
     Region          373..376
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409388"
     Region          381..385
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409388"
     Region          389..393
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409388"
     Region          401..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409388"
     Region          412..422
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409388"
     Region          419..910
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          950..1045
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1034..1035,1037..1038)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1141..1435
                     /region_name="Neogenin_C"
                     /note="Neogenin C-terminus; pfam06583"
                     /db_xref="CDD:461954"
     CDS             1..1435
                     /gene="NEO1"
                     /coded_by="XM_041469107.1:223..4530"
                     /db_xref="GeneID:121354449"
ORIGIN      
        1 maarrarrll gslciallfa qtaptgaaar sgsrslltes lvrtftpfyf lvepldvlsv
       61 rgasvimncs aqcetpprie wkkdgsflnl vsddrrqllp dgsllinsvv hskhnkpdeg
      121 yyqcvatvds lgtivsrtak ltvaglprft sqpeptsvhr ggsavlgcev taelapllrw
      181 ererqalapg prvlqlpgga llltnasdtd aglyrcaldt ggtpkysdea elkvlpdaee
      241 pqrlvllkap sslsrlpgqs avfpcvaaaf ppplirwtrn geelptdgsg rfqllpggvl
      301 eirdvaeada gtftciaesg ndtleaqael avqvpptflk rpaniyahes mdivfecevt
      361 gkptptvkwv kngdvvipsd yfkivkehnl qvlglvksde gfyqciaend vgnaqagaql
      421 iildlapata gplpsaprdv vatlvstrfi rltwrppasd pqgdnltysi fytkeginre
      481 rventsrpge tqvmiqnlmp etvyvfrvva qnrhgpgess allkvatqpe vqlpgpapni
      541 rafsssptsv tvtwetplsg ngdiqnykly ymekgqhteq dvdvaglsht vaglkkftey
      601 sfrvvaynkh gpgvsthdvv vrtlsdvpsa ppqnltlevr nsksillqwq pppagtqsgq
      661 itgykiryrk vsrksdvtes vggtqlsqli eglergteys frvaamting tgpatdwvsa
      721 etfesdldes rvpevpsslh vrplvtsivv swtppenqdv vvrgyaigyg igsphaqtik
      781 vdykqryyti enldpsshyv itlkafnnvg egiplyesav trphsdtsev dlfvinapyt
      841 pvpdpspmmp pvgvqasils hdtiritwad nslpknqkit darfytvrwk tnipantkyk
      901 tanattlsyl vtglkpntly efsvmvtkgr rsstwsmtah gttfelvpts ppkdvtvvsk
      961 egkprtiivn wqppseangk itgyiiyyst dvnaeihdwv iepvvgnrlt hqiqeltldt
     1021 pyffkiqarn skgmgpmsea vqfrtpkasg sagkgsrpmd lgpdykpplg gsnsphgspt
     1081 spldsnmllv iivsvgviti vivvivavfc trrttshqkk kraacksvng shkykgnskd
     1141 vkppdlwihh erlelkpidk spdpnpimtd tpiprnsqdi tpvdnsmdsn ihqrrnsyrg
     1201 hesedsmstl agrrgmrpkm mmpfdsqppq pvisahpihs ldpphhhfhs gslasptrsf
     1261 lhhqlspwpl gsamshsdra dstesvrntp stdtmpaasa vpsaelpeae gpflpaeeep
     1321 qgpptahvrp shplksfavp avpnaggpfd palpstpllt qqapghplha vktasigtlg
     1381 rtrppmpvvv psapevqett rmledsessy epdeltkema hleglmkdln aitta
//
LOCUS       XP_041325042             605 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 25 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325042
VERSION     XP_041325042.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469108.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..605
                     /product="kelch-like protein 25 isoform X1"
                     /calculated_mol_wt=67859
     Region          40..167
                     /region_name="BTB_POZ_KLHL25"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 25 (KLHL25); cd18254"
                     /db_xref="CDD:349563"
     Region          55..582
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          160..258
                     /region_name="BACK_KLHL25_ENC2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 25 (KLHL25); cd18514"
                     /db_xref="CDD:350589"
     Region          346..390
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          394..447
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          450..496
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          498..540
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..605
                     /gene="KLHL25"
                     /coded_by="XM_041469108.1:224..2041"
                     /db_xref="GeneID:121354450"
ORIGIN      
        1 mncmqrgfpt gkscatmsvs vhenrksrts tgsmnillfh kashpdcvls hlntlrkhcm
       61 ftdvtlwagn rsfpchravl aassryfeam fsnglresld devnfhdslh pevlellldf
      121 ayssriiine enaeslleag dmlqfhdvrd aaaefleknl ypsnclgmml lsdahqcrrl
      181 yelswrmclv nfetvhksed fnnlskdtll dlissdelei edeekvfkav mqwvkydlde
      241 rkaylpellr nvrlallpse clkealaced limvdernkl vldeaiqckk kilqndgvvt
      301 slcarprkag htllilggqt fmcdkiyqvd hkakeiipka dlpsprkefs acaigckvyi
      361 tggrgsengv skdvwvydtv heewskaapm liarfghgsa elenclyvvg ghtavagvfp
      421 aspsvslkqv ekydpisnkw mmvaplrdgv snaavvsarl klfvfggtsi hrdmvskvqc
      481 ydpaenrwmi kaecpqpwry taaavlgsqi fimggdteft aasayrfdce tdqwtrigdm
      541 takrmschal asgnklyvvg gyfgtqrckt ldcydpmsdt wncittvpys liptafvstw
      601 khlps
//
LOCUS       XP_041325043             589 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 25 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325043
VERSION     XP_041325043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="kelch-like protein 25 isoform X2"
                     /calculated_mol_wt=66145
     Region          24..151
                     /region_name="BTB_POZ_KLHL25"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 25 (KLHL25); cd18254"
                     /db_xref="CDD:349563"
     Region          39..566
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK_KLHL25_ENC2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 25 (KLHL25); cd18514"
                     /db_xref="CDD:350589"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..524
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_041469109.1:167..1936"
                     /db_xref="GeneID:121354450"
ORIGIN      
        1 msvsvhenrk srtstgsmni llfhkashpd cvlshlntlr khcmftdvtl wagnrsfpch
       61 ravlaassry feamfsnglr eslddevnfh dslhpevlel lldfayssri iineenaesl
      121 leagdmlqfh dvrdaaaefl eknlypsncl gmmllsdahq crrlyelswr mclvnfetvh
      181 ksedfnnlsk dtlldlissd eleiedeekv fkavmqwvky dlderkaylp ellrnvrlal
      241 lpseclkeal acedlimvde rnklvldeai qckkkilqnd gvvtslcarp rkaghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsacaigc kvyitggrgs engvskdvwv
      361 ydtvheewsk aapmliarfg hgsaelencl yvvgghtava gvfpaspsvs lkqvekydpi
      421 snkwmmvapl rdgvsnaavv sarlklfvfg gtsihrdmvs kvqcydpaen rwmikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcetdqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp msdtwncitt vpysliptaf vstwkhlps
//
LOCUS       XP_041325044             589 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 25 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325044
VERSION     XP_041325044.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469110.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..589
                     /product="kelch-like protein 25 isoform X2"
                     /calculated_mol_wt=66145
     Region          24..151
                     /region_name="BTB_POZ_KLHL25"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 25 (KLHL25); cd18254"
                     /db_xref="CDD:349563"
     Region          39..566
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          144..242
                     /region_name="BACK_KLHL25_ENC2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 25 (KLHL25); cd18514"
                     /db_xref="CDD:350589"
     Region          330..374
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          378..431
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          434..480
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          482..524
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..589
                     /gene="KLHL25"
                     /coded_by="XM_041469110.1:465..2234"
                     /db_xref="GeneID:121354450"
ORIGIN      
        1 msvsvhenrk srtstgsmni llfhkashpd cvlshlntlr khcmftdvtl wagnrsfpch
       61 ravlaassry feamfsnglr eslddevnfh dslhpevlel lldfayssri iineenaesl
      121 leagdmlqfh dvrdaaaefl eknlypsncl gmmllsdahq crrlyelswr mclvnfetvh
      181 ksedfnnlsk dtlldlissd eleiedeekv fkavmqwvky dlderkaylp ellrnvrlal
      241 lpseclkeal acedlimvde rnklvldeai qckkkilqnd gvvtslcarp rkaghtllil
      301 ggqtfmcdki yqvdhkakei ipkadlpspr kefsacaigc kvyitggrgs engvskdvwv
      361 ydtvheewsk aapmliarfg hgsaelencl yvvgghtava gvfpaspsvs lkqvekydpi
      421 snkwmmvapl rdgvsnaavv sarlklfvfg gtsihrdmvs kvqcydpaen rwmikaecpq
      481 pwrytaaavl gsqifimggd teftaasayr fdcetdqwtr igdmtakrms chalasgnkl
      541 yvvggyfgtq rcktldcydp msdtwncitt vpysliptaf vstwkhlps
//
LOCUS       XP_041325045             409 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity mitogen-activated protein kinase kinase 5 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325045
VERSION     XP_041325045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="dual specificity mitogen-activated protein
                     kinase kinase 5 isoform X1"
                     /calculated_mol_wt=45466
     Region          17..107
                     /region_name="PB1_Map2k5"
                     /note="PB1 domain is essential part of the
                     mitogen-activated protein kinase kinase 5 (Map2k5, alias
                     MEK5) one of the key member of the signaling kinases
                     cascade which involved in angiogenesis and early
                     cardiovascular development. The PB1 domain of Map2k5...;
                     cd06395"
                     /db_xref="CDD:99717"
     Site            order(64,66,68,77)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99717"
     Region          163..>377
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(171..174,177,179,192,194,224,240..243,282,286..287,
                     289,299..300)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:132950"
     CDS             1..409
                     /gene="MAP2K5"
                     /coded_by="XM_041469111.1:146..1375"
                     /db_xref="GeneID:121354451"
ORIGIN      
        1 mlwllcgpcg amdsqalvir ikipdgaavd wtvhsapqll frdvldvigq vlpdatttaf
       61 eyededgdri tvrsdeemka mlsyyystvm eqqvngqlie plqiyprack ppgkrnihgl
      121 kvntragags gasaasealp snslkkssae lkkilangqm neqdiryrdi lghgnggtvy
      181 kayhvrsgki lavkvipldi tlelqkqims eleilykcds syiigfygaf fvenrislct
      241 efmdggsldv yrkipehvlg riavavvkgl tylwslkilh rdvkpsnmlv ntrgqvklcd
      301 fgvstqlvns iaktyvgtna ymaperisge qygihsdvws lgisfmelal grfpypqiqk
      361 nqgslmplql lqcivdetle nysrilenae nffslkkkqi qakrlkslq
//
LOCUS       XP_041325046             446 aa            linear   VRT 06-MAY-2021
DEFINITION  dual specificity mitogen-activated protein kinase kinase 5 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325046
VERSION     XP_041325046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469112.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..446
                     /product="dual specificity mitogen-activated protein
                     kinase kinase 5 isoform X2"
                     /calculated_mol_wt=49461
     Region          17..107
                     /region_name="PB1_Map2k5"
                     /note="PB1 domain is essential part of the
                     mitogen-activated protein kinase kinase 5 (Map2k5, alias
                     MEK5) one of the key member of the signaling kinases
                     cascade which involved in angiogenesis and early
                     cardiovascular development. The PB1 domain of Map2k5...;
                     cd06395"
                     /db_xref="CDD:99717"
     Site            order(64,66,68,77)
                     /site_type="other"
                     /note="PB1 interaction surface [polypeptide binding]"
                     /db_xref="CDD:99717"
     Region          163..441
                     /region_name="PKc_MKK5"
                     /note="Catalytic domain of the dual-specificity Protein
                     Kinase, Mitogen-activated protein Kinase Kinase 5;
                     cd06619"
                     /db_xref="CDD:132950"
     Site            order(171..175,179,192,194,224,240..243,246..247,250,282,
                     284..287,289,299..300,303,315..318,320,347,356)
                     /site_type="active"
                     /db_xref="CDD:132950"
     Site            order(171..175,177,179,192,194,224,240..243,246..247,
                     249..250,284,286..287,289,300)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:132950"
     Site            order(174..175,282,284..286,303,315..318,320,347,356)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:132950"
     Site            299..320
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:132950"
     CDS             1..446
                     /gene="MAP2K5"
                     /coded_by="XM_041469112.1:145..1485"
                     /db_xref="GeneID:121354451"
ORIGIN      
        1 mlwllcgpcg amdsqalvir ikipdgaavd wtvhsapqll frdvldvigq vlpdatttaf
       61 eyededgdri tvrsdeemka mlsyyystvm eqqvngqlie plqiyprack ppgkrnihgl
      121 kvntragags gasaasealp snslkkssae lkkilangqm neqdiryrdi lghgnggtvy
      181 kayhvrsgki lavkvipldi tlelqkqims eleilykcds syiigfygaf fvenrislct
      241 efmdggsldv yrkipehvlg riavavvkgl tylwslkilh rdvkpsnmlv ntrgqvklcd
      301 fgvstqlvns iaktyvgtna ymaperisge qygihsdvws lgisfmelal grfpypqiqk
      361 nqgslmplql lqcivdevsp viparsfsdp fvssllfcmk kqpkerpape dlmghpfvvq
      421 yndgnaevvs mwvcrmleer raqgpq
//
LOCUS       XP_041325047             429 aa            linear   VRT 06-MAY-2021
DEFINITION  arrestin domain-containing protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325047
VERSION     XP_041325047.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469113.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..429
                     /product="arrestin domain-containing protein 4"
                     /calculated_mol_wt=46452
     Region          33..180
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          202..329
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..429
                     /gene="ARRDC4"
                     /coded_by="XM_041469113.1:49..1338"
                     /db_xref="GeneID:121354452"
ORIGIN      
        1 maaagpgpga ggavktlalv ledearrggg ggycsgdtvs gqvllelagp lplrglrlea
       61 agrarvawse spgavpgagt wgvavrapgp gprreaevry ldirqsllrd ppegeedlil
      121 ldgrhefpfs fqlpqeplvt sftgkygsiq yyvkavlerp avpdqsvqte lqiishidvs
      181 spalltpvlr sqekmvgcwf ftsgpvslsa kierkgycng eaipiyaeie ncssrlivpk
      241 aaifqtqtyl asgktktfrq mvanvrgnhi asgstdtwng ktlkippvsp sildcciirv
      301 eyslavyihi pgakklmiem pvvigtipci gfssrnssit sqfsmdmswl altmpehpea
      361 ppnyadvvse eefsrhvpay pppidceeql ccpvfayiqe frfqppplys eidphptdve
      421 evqpvsfml
//
LOCUS       XP_041325048             509 aa            linear   VRT 06-MAY-2021
DEFINITION  aromatase [Pyrgilauda ruficollis].
ACCESSION   XP_041325048
VERSION     XP_041325048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..509
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..509
                     /product="aromatase"
                     /calculated_mol_wt=58436
     Region          72..485
                     /region_name="CYP19A1"
                     /note="cytochrome P450 family 19, subfamily A, polypeptide
                     1; cd20616"
                     /db_xref="CDD:410709"
     Site            order(107,115,132..133,141,145,152,306,310..311,364,370,
                     373,375,429..431,435..439,446..447)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:410709"
     Site            order(115,133..134,224,305..306,309..310,370,372..374,477)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:410709"
     CDS             1..509
                     /gene="LOC121354453"
                     /coded_by="XM_041469114.1:218..1747"
                     /db_xref="GeneID:121354453"
ORIGIN      
        1 mvletlnpmh ynitslvpdt mpvatvpili lmcflfliwn heetssipgp gycmgigpli
       61 shgrflwmgv gnacnyynkt ygefvrvwis geetfiisks ssvfhvmkhw hyvsrfgskl
      121 glqcigmyen giifnnnpah wkeirpfftk alsgpglvrm iaicvestte hldrlqevtt
      181 elgninvlnl mrrimldtsn klflgvplde naivlkiqny fdawqalllk pdiffkiswl
      241 ckkykdavkd lkgameilie qkrqklstve kldehmdfas qlifaqnrgd ltaenvnqcv
      301 lemmiaapdt lsvtlffmli liaehptvee emmreieavv gdrdiqsddm pnlktvenfi
      361 yesmryqpvv dlimrkalqd dvidgypvkk gtniilnigr mhkleffpkp nefslenfek
      421 nvpsryfqpf gfgprscvgk fiamvmmkai lvtllrrcrv qtmkgrglnn iqknndlsmh
      481 pierqpllem vftprrnanq nqgdrmdqh
//
LOCUS       XP_041325050             660 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/potassium/calcium exchanger 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325050
VERSION     XP_041325050.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469116.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..660
                     /product="sodium/potassium/calcium exchanger 1"
                     /calculated_mol_wt=72634
     Region          <49..660
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     CDS             1..660
                     /gene="SLC24A1"
                     /coded_by="XM_041469116.1:454..2436"
                     /db_xref="GeneID:121354454"
ORIGIN      
        1 mhlprrrrlr rnrilfllai vlvlsfcqlq fspsalpash rapqptdpak vtsrelpsnk
       61 tavrgnatap kirhciyvdp epavpvttsv gttpqqenas esspdekppy eskgeypqdl
      121 fsveerrqgw vvlhifgmiy vfvalaivcd eyfvpalgvi teklqisedv agatfmaagg
      181 sapelftsli gvfishsnvg igtivgsavf nilfvigtca lfsrqilhlt wwplfrditf
      241 yivdllmlil ffldsvidww eslllltaya tyvftmkqnv fleqwvkqel kkklnavqaa
      301 saehmqktsr avvddgtmkp pdgrklkpgp alqrgsssas lhnsqmrgti vqlmihtldp
      361 laeakfkdrv dilsnmakak aetlegqgsq peegkkapss vqvtpasdse pskdtqkgdv
      421 pqdgqplsss dtsddssses qedsdgdste ddendeplsl ewpesrtkqa iylflfpivf
      481 plwstlpdvr nseskkffvi tffgsilwia afsylmvwwa hqvgetigis eeimgltila
      541 agtsipdlit svivarkglg dmavsssvgs nifditvglp vpwflfsifn glspvavssn
      601 glfcaivllf lmllfvilsi avckwkmnkl lgltmfalyf vfliisvmle dkiiscpvsv
//
LOCUS       XP_041325051             540 aa            linear   VRT 06-MAY-2021
DEFINITION  retinal dehydrogenase 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325051
VERSION     XP_041325051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..540
                     /product="retinal dehydrogenase 2 isoform X1"
                     /calculated_mol_wt=58724
     Region          62..534
                     /region_name="ALDH_F1AB_F2_RALDH1"
                     /note="NAD+-dependent retinal dehydrogenase 1, ALDH
                     families 1A, 1B, and 2-like; cd07141"
                     /db_xref="CDD:143459"
     Site            order(112..113,117,120,122,126,167,170..171,175,177..178,
                     181..185,187..188,191..198,291,294,297..298,301..302,304,
                     309,474,476,483,486,488..495,502..504,507..510,512,515,
                     520,527..532,534)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143459"
     Site            order(205..208,232,235,265,269..270,283,286,289,309..310,
                     342,389,392,439)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143459"
     Site            order(209,308,339,342)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..540
                     /gene="ALDH1A2"
                     /coded_by="XM_041469117.1:238..1860"
                     /db_xref="GeneID:121354455"
ORIGIN      
        1 mktsskngsy igsagevkgk iqvveeelqs vpahleeqqd tcatscgeps eggctpgppg
       61 mifinnewqn sesgrifpvy npatgeqicd iqeadkvdtd kavraarlaf slgsvwrrmd
      121 aserghlldk ladlverdra ilatmeslns gkpflqafyv dlqgviktlr yyagwadkih
      181 gmtipvdgdy ftftrhepig vcgqiipwnf pllmfawkia palccgntvv ikpaeqtpls
      241 alymgalike agfppgvvni lpgfgpivga aiashvgidk iaftgstevg kliqeaagrs
      301 nlkrvtlelg gkspniifad adldyaveqa hqgvffnqgq cctagsriyv eesiyeefvr
      361 rsverakrrv vgspfdptte qgpqidkkqy nkileliqsg itegaklecg gkglgrkgff
      421 ieptvfsnvt ddmriakeei fgpvqeilrf ktmdeviera nnsdfglvaa vftndinkal
      481 tvssamqagt vwincynaln aqspfggfkm sgngremgec glreysevkt vtikipqkns
//
LOCUS       XP_041325052             518 aa            linear   VRT 06-MAY-2021
DEFINITION  retinal dehydrogenase 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325052
VERSION     XP_041325052.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469118.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..518
                     /product="retinal dehydrogenase 2 isoform X2"
                     /calculated_mol_wt=56698
     Region          32..512
                     /region_name="ALDH_F1AB_F2_RALDH1"
                     /note="NAD+-dependent retinal dehydrogenase 1, ALDH
                     families 1A, 1B, and 2-like; cd07141"
                     /db_xref="CDD:143459"
     Site            order(90..91,95,98,100,104,145,148..149,153,155..156,
                     159..163,165..166,169..176,269,272,275..276,279..280,282,
                     287,452,454,461,464,466..473,480..482,485..488,490,493,
                     498,505..510,512)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143459"
     Site            order(183..186,210,213,243,247..248,261,264,267,287..288,
                     320,367,370,417)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143459"
     Site            order(187,286,317,320)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..518
                     /gene="ALDH1A2"
                     /coded_by="XM_041469118.1:91..1647"
                     /db_xref="GeneID:121354455"
ORIGIN      
        1 mtsskiempg evkadpaalm aslhllpspt lnleikytki finnewqnse sgrifpvynp
       61 atgeqicdiq eadkvdtdka vraarlafsl gsvwrrmdas erghlldkla dlverdrail
      121 atmeslnsgk pflqafyvdl qgviktlryy agwadkihgm tipvdgdyft ftrhepigvc
      181 gqiipwnfpl lmfawkiapa lccgntvvik paeqtplsal ymgalikeag fppgvvnilp
      241 gfgpivgaai ashvgidkia ftgstevgkl iqeaagrsnl krvtlelggk spniifadad
      301 ldyaveqahq gvffnqgqcc tagsriyvee siyeefvrrs verakrrvvg spfdptteqg
      361 pqidkkqynk ileliqsgit egaklecggk glgrkgffie ptvfsnvtdd mriakeeifg
      421 pvqeilrfkt mdevierann sdfglvaavf tndinkaltv ssamqagtvw incynalnaq
      481 spfggfkmsg ngremgecgl reysevktvt ikipqkns
//
LOCUS       XP_041325053             288 aa            linear   VRT 06-MAY-2021
DEFINITION  aquaporin-9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325053
VERSION     XP_041325053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469119.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="aquaporin-9 isoform X1"
                     /calculated_mol_wt=30417
     Region          18..264
                     /region_name="GlpF"
                     /note="Glycerol uptake facilitator or related aquaporin
                     (Major Intrinsic protein Family) [Carbohydrate transport
                     and metabolism]; COG0580"
                     /db_xref="CDD:440345"
     CDS             1..288
                     /gene="AQP9"
                     /coded_by="XM_041469119.1:81..947"
                     /db_xref="GeneID:121354456"
ORIGIN      
        1 msrknkrslk ekfslknslv kealseflgt filialgcgc vgqavlsrga hggpmtvsvg
       61 famavtiavy vsggvsgghi npavslamcv tgrlkwtklp iyilaqflga fvgaaavfgi
      121 yynafmeysd gklevtgpna taqifatypa pylslvngfa dqvmstavll laifaifdtk
      181 nnsvpkglep iavgllvivl tcslgmnsgc amnpardlgp rlftavagwg mevftagnnw
      241 wwvpivapll ggvlgamiyv ifieihhsdp qsgeendvha kyeltnma
//
LOCUS       XP_041325054             256 aa            linear   VRT 06-MAY-2021
DEFINITION  aquaporin-9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325054
VERSION     XP_041325054.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469120.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="aquaporin-9 isoform X2"
                     /calculated_mol_wt=26740
     Region          <1..231
                     /region_name="MIP"
                     /note="Major intrinsic protein (MIP) superfamily. Members
                     of the MIP superfamily function as membrane channels that
                     selectively transport water, small neutral molecules, and
                     ions out of and between cells. The channel proteins share
                     a common fold: the N-terminal...; cl00200"
                     /db_xref="CDD:444743"
     Site            order(29,47..49,177..178,181,184)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(49..51,181..183)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..256
                     /gene="AQP9"
                     /coded_by="XM_041469120.1:128..898"
                     /db_xref="GeneID:121354456"
ORIGIN      
        1 mmalgcgcvg qavlsrgahg gpmtvsvgfa mavtiavyvs ggvsgghinp avslamcvtg
       61 rlkwtklpiy ilaqflgafv gaaavfgiyy nafmeysdgk levtgpnata qifatypapy
      121 lslvngfadq vmstavllla ifaifdtknn svpkglepia vgllvivltc slgmnsgcam
      181 npardlgprl ftavagwgme vftagnnwww vpivapllgg vlgamiyvif ieihhsdpqs
      241 geendvhaky eltnma
//
LOCUS       XP_041325055             147 aa            linear   VRT 06-MAY-2021
DEFINITION  mitotic-spindle organizing protein 2B-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325055
VERSION     XP_041325055.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469121.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="mitotic-spindle organizing protein 2B-like"
                     /calculated_mol_wt=14968
     Region          <19..91
                     /region_name="MOZART2"
                     /note="Mitotic-spindle organizing gamma-tubulin ring
                     associated; pfam12926"
                     /db_xref="CDD:432879"
     CDS             1..147
                     /gene="LOC121354457"
                     /coded_by="XM_041469121.1:25..468"
                     /db_xref="GeneID:121354457"
ORIGIN      
        1 msegtagmaa paamadarlr rkqllsaeea elfelaqaag sgldpevfrv lldllrmnva
       61 plavfqvlks mcagqrlppa aesgpaapap igplrrnkts savsgsqila erssregsaq
      121 rmprqpsasr vqkagtsgks sgggnsa
//
LOCUS       XP_041325056             195 aa            linear   VRT 06-MAY-2021
DEFINITION  lysM and putative peptidoglycan-binding domain-containing protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325056
VERSION     XP_041325056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469122.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..195
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 2"
                     /calculated_mol_wt=21346
     Region          46..90
                     /region_name="LysM"
                     /note="Lysin Motif is a small domain involved in binding
                     peptidoglycan; cd00118"
                     /db_xref="CDD:212030"
     CDS             1..195
                     /gene="LYSMD2"
                     /coded_by="XM_041469122.1:69..656"
                     /db_xref="GeneID:121354458"
ORIGIN      
        1 maealrqepa ggpeseaels qrlartkars ygstasvaap laeryvehrl sagdtlqgia
       61 lkygvtmeqi kranklftnd ciflrktlni pvisekpllf nglnslespe netvdsspsc
      121 derpvavqee sssspsspep dnqptapeel sakdflqrld lqiklskqaa rklkddnvrd
      181 eeneegpyat ssyhq
//
LOCUS       XP_041325057             862 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF23 [Pyrgilauda ruficollis].
ACCESSION   XP_041325057
VERSION     XP_041325057.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469123.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..862
                     /product="kinesin-like protein KIF23"
                     /calculated_mol_wt=97890
     Region          22..446
                     /region_name="KISc_KIF23_like"
                     /note="Kinesin motor domain, KIF23-like subgroup; cd01368"
                     /db_xref="CDD:276819"
     Site            order(31,110,113,115..118,349)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276819"
     Site            order(401,404,407)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276819"
     Region          <553..>673
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          709..808
                     /region_name="MKLP1_Arf_bdg"
                     /note="Arf6-interacting domain of mitotic kinesin-like
                     protein 1; pfam16540"
                     /db_xref="CDD:465166"
     CDS             1..862
                     /gene="KIF23"
                     /coded_by="XM_041469123.1:1..2589"
                     /db_xref="GeneID:121354459"
ORIGIN      
        1 mkaarartpr rprkgtnptq kdpvgvycrv rplsradqec cievisgttv qihppegyrv
       61 frngeyretq ysfkevfgtl vvqkelfdvv akplvedlir gkngllftyg vtgsgkthtm
      121 tgspgdggll prclamifns igpfqakrfv fklddkngvd vqtevealle rqrrealptp
      181 ktpagkrqld pefadmidvq eqcraeevde dnvygvfvsy ieiynnyiyd lleeapcdpi
      241 kpkwnncntp vrngdfvppq skilredqnh nmyvtgctev evksteeafe vfwrgqkkrr
      301 iantqlnres srshsvfiik laqapldadg dnvlqekeqi tlsqlslvdl agsertnrtk
      361 aegnrlreag ninqslmtlr tcievlrenq lygtnkmvpy rdsklthlfk nyfdgegkvr
      421 mivcvnpkae dyeeslqvmr faemtqevev arpldrplcg ltpgrrlrnq aggpvgaeep
      481 saaelffqsf pplpscelld inddqtlpkl iealeqrhkm rqmlaeefak nvlafktmlq
      541 efdssvaske nyiqgklaek ektitgqrte lerlekkikt leykieilek tatiyeedkr
      601 nlqqelesks qklqrqasdk rrlearlqgm vaetslkwek ecerrvaakq lemqnklwvk
      661 deklkqlkai vtepraerpe rpsrererek alprsvspsp apsapavplr prrsrsager
      721 wvdhrppshv ptetllqprv praitveaps eralarcdry llthqelasd geiqtklikg
      781 dvfktrgggq avqftdietl kqesptgrkr rssppnpdpa gdavdsewtd vetrcsvave
      841 mragsalgpg fqhhaqpkrr kp
//
LOCUS       XP_041325058             382 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM81A [Pyrgilauda ruficollis].
ACCESSION   XP_041325058
VERSION     XP_041325058.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469124.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="protein FAM81A"
                     /calculated_mol_wt=43754
     Region          <39..376
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..382
                     /gene="FAM81A"
                     /coded_by="XM_041469124.1:655..1803"
                     /db_xref="GeneID:121354461"
ORIGIN      
        1 mahrspifpt lapserrvrn iplhsqalta vplasaslvd qledrilshe kttaalveha
       61 frikedivst lhrmqnkggg drlarqllee hirnitaivr qlnrdiemlq eqirvrdnls
      121 ygtnstlksl emrqlsglgd lrgrvarcda glarlsaehk ityerlqsls kdqhtsklil
      181 eskikeaeiq ishllsrveq simqqeaklk iaykesnqql qvldtklkda veelsnqils
      241 arswleqehg rtekelvqki dqlsltfkes temsergiem kfnqmaekie rieemqkitm
      301 eaheakqsee klnirivklq neinedikem kaevnagfaa iyesigslrq vleakmkldr
      361 delqkqihqm kqevprwgea gp
//
LOCUS       XP_041325059             694 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptic vesicle glycoprotein 2B [Pyrgilauda ruficollis].
ACCESSION   XP_041325059
VERSION     XP_041325059.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469125.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="synaptic vesicle glycoprotein 2B"
                     /calculated_mol_wt=78915
     Region          9..694
                     /region_name="synapt_SV2"
                     /note="synaptic vesicle protein SV2; TIGR01299"
                     /db_xref="CDD:130366"
     CDS             1..694
                     /gene="SV2B"
                     /coded_by="XM_041469125.1:1..2085"
                     /db_xref="GeneID:121354462"
ORIGIN      
        1 mdggyrntnq vsddyryqdg sydapndgyy rggdepaqee daqsdvtegh deddevyege
       61 yqgiphpddi kekqkkrapa vddeyrdrad lmaermedee qlahqyenii eecghgrfqw
      121 tlffvlglal madgvevfvv gfvlpsaekd mclsssnkgm lglivylgmm vgavllggla
      181 dklgrkqclm islainaafa flssfvqgyg fflfcrlisg lgiggtlpiv fayfseflsr
      241 ekrgehlswl cmfwmiggiy asamawsiip hygwgfsmgt kyhfhswrvf vlvcalpcia
      301 slvalkfmpe sprflleigk hdeawmilkq vhdtnmrakg epervftvsy iktpkqvdef
      361 ieiqsstgtw yqrwlvritt tlkqvwdnvl ycltaqyrmn tlmlavvwft malsyygliv
      421 wfpdmiryfq deayesrvki fdeeevshft fnftlenqih rngeyrndkf igmkfkevrf
      481 edslfedcyf edvrssetff enctiistvf yntdlyehkf incrlinstf mkekegchid
      541 feedndfliy lvsflgslsv lpgniisall mdkigrikmi ggsmlisavc cfflffgnse
      601 samigwqclf cgasiaawna ldvitvelyp tdkratafgi lnglckfgai lgnsifssfv
      661 gitkvvpill assalvgggl lalrlpetre qvlm
//
LOCUS       XP_041325060             820 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: NADPH oxidase 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325060
VERSION     XP_041325060.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469126.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..820
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..820
                     /product="LOW QUALITY PROTEIN: NADPH oxidase 5"
                     /calculated_mol_wt=91673
     Region          27..146
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     Region          401..820
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(429,443..446,460..462,466..469,645)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(443,445..446)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            640..650
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(640,644..647,649)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(645..646,694..696,796..797)
                     /site_type="other"
                     /note="NAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(692..693,696)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..820
                     /gene="NOX5"
                     /coded_by="XM_041469126.1:1..2463"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121354463"
ORIGIN      
        1 mgtaadaewl rwaskkfgnv agkekeisle efksalqvke sffaerffal fdsdgsgsls
       61 reellgslrr llhgnstekl rflfqvydvd gsgsidaeel rvvlrgclre sslalpeerl
      121 galsqallqa ldrdhsgsit fpelqeqlea fpellenlsi saaswlkpps aspsepwlcc
      181 csresrgdrr arrcclgawl attalllalg alwhrergpa lalargcgqs lnlncallaa
      241 lmlrrsltwl rstplaelfp lelhvrgher vghlvlalgt ahagahlaqa grlaqrdwlv
      301 algeyarrar pgaggvggta pqtglallal llamlacssp cvrrgghfev fywshlsyip
      361 vwillllhgp hfwkwflipg slfvlekvlg wawrragdlh ileakllpsk vthlviqrpk
      421 sfrfqpgdyv ylnipaiaay ewhpfsissa peqpetlwlh irargqwttk lyeyfqqlel
      481 hgpepnlprk swrerrsrhw kqegsvafsr dgaveltafq asgatfpgkd peqgvstapt
      541 pgdrdwipnw ikllkkllfr kkflgyycgi gswncvcspv gkhpnpgnfg saweggvvta
      601 plscralgge tqrscsvkcf ldgpygtpsr riftsehavl iaagigitpf asilqsimfr
      661 yrrrkqscps chfswseeqr deemtlrkvd fiwitrdqqh lqwflgllak leteqaelep
      721 ggkflelqly mtsalgkgdv kalglqlald llaareqrds isglrsrtrp grpdwdkvfg
      781 kvaaerrgkv rvffcgstgl akvirrhcrs fgfrfskenf
//
LOCUS       XP_041325061            1078 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 17
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325061
VERSION     XP_041325061.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469127.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1078
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1078
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 17"
                     /calculated_mol_wt=120240
     Region          <75..166
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          218..435
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(375..376,379,385)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          452..519
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          532..584
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          <616..685
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          <692..769
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          795..847
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          851..907
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          911..956
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          962..1014
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     CDS             1..1078
                     /gene="ADAMTS17"
                     /coded_by="XM_041469127.1:1..3237"
                     /db_xref="GeneID:121354464"
ORIGIN      
        1 mfdgcllplv vpclllcgld agtaggaele vvipervple kihllppggd rggprrrraa
       61 aeqeeeeeav llrlpaagae lylhlrrdlr flargfaver rrgearrppr erlcfysgha
      121 lnrsdsfasl stcaglvgyi qlgseqlliq pvnasetsfs gkehfirrrr stkpghpsrp
      181 qgpeehckvv aekkrqkkvk atsdwrerrn airltseytv etlvvadadm vqyhgaeaaq
      241 rfiltvmnmv ynmfqhqslg ikvnirvtkl vllhsrpakl sighhgersl esfcqwqnee
      301 yggakylgnn qvpgarddtp pvdaavfvtr tdfcvhkdep cdtvgiaylg gvcsakrkcv
      361 laednglnla ftiahelghn mgmshdddhq pcagrshims gewvkgrnps dlswsscsrd
      421 dlenflkskv stcllltdpr sqysvrlphk lpgmhysade qcqilfgtna tfckdmehlm
      481 caglwclveg dtscktkldp pldgtecgad kwcragecvs ktpipehvdg dwsvwsqwsm
      541 csrtcgtgvr frqrkcdnpp pgpggkncrg anvehtvcen lpcpkgvpsf rdqqcqahdr
      601 ytskkksllt avivddkpce lfcsplgkds pvlvtdrvld gtpcgpyetd lcvhgkcqki
      661 gcdgiigsaa kedrcgicsg dgktckvvkg dfnhtkgmal kdsskrsins dwkielpgef
      721 qiagttvryv rrglwekisa kgptkiplhl mvllfhdqny gihyeytipv nytaenrsep
      781 ekqqdslyiw thsgwegcsv qcgggerkti vsctriinkt mtlvndsdcq rvtrpepqvr
      841 kcnthpcqsr wvtghwspcs atcekgvqhr evtcvyqlqn gtyvntrdly clgskpatvq
      901 scegrdclsi weasewskcs sdcgrgiqkr tvtctnsqgk cdaatrprde eecedhtgcy
      961 ewktgdwskc sstcgkglqs rvvqcmhkvt grhgsecpal akpaayrqch qevcndrinv
     1021 ntitsprlaa ltykctgdqw tvycrvirek nlcqdmrwyq rccqtcrdfy ankmqqks
//
LOCUS       XP_041325062             571 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family O member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325062
VERSION     XP_041325062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469128.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..571
                     /product="pleckstrin homology domain-containing family O
                     member 2"
                     /calculated_mol_wt=63316
     Region          16..114
                     /region_name="PH_PLEKHO1_PLEKHO2"
                     /note="Pleckstrin homology domain-containing family O
                     Pleckstrin homology domain; cd13317"
                     /db_xref="CDD:270127"
     CDS             1..571
                     /gene="PLEKHO2"
                     /coded_by="XM_041469128.1:219..1934"
                     /db_xref="GeneID:121354465"
ORIGIN      
        1 meqdtkeevs ekpkcsptae kygwikkssg gllglwkdry iqlrktqlmv yededeqkci
       61 etvelesydk cqelrallkr knrfilirsp gkkvhdikfq aptleekesw ikalneginr
      121 gknkvfdevk vdeslsldhv trdrvkvshg rrpptrshlk eaakctsdgi lrldldivdn
      181 gpptfdstin esdneppqke tpkppmpptk ptgtkenqea ennvpdqehk kplsppqppd
      241 kklkeniksk dtvnakeeds gsseenvees qapseenken laevsnrvit kapiplpksv
      301 pdklkvawdq ptiepkkted lessgddgkd nlseiaaadv skppvppkvl pekmlatens
      361 shgdleaggw eqqesgsskp pvngitasev aeftsltaet eegngrtaae keqqtsaeet
      421 etslatetdh esvkatiekk dstentsvlk lrcsslgdll sdskskqral pgqgfpkdsh
      481 qciakmeekv anerekaekl lqkvlregle qaqegngppv vaetllneav eqlrqasqvl
      541 qeikglgelk kegtqkekqk dlvtlyrrsa p
//
LOCUS       XP_041325063            1999 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat serine/threonine-protein kinase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325063
VERSION     XP_041325063.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469129.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1999
                     /product="leucine-rich repeat serine/threonine-protein
                     kinase 1"
                     /calculated_mol_wt=223200
     Region          <51..>208
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(116,119..121,123..124,128,131,144,146,148..149,
                     152..154,156..157,161,164,174,176,178,189..190,193..195,
                     197..198,202,205)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          146..174
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          176..208
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          271..293
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..>599
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          294..320
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..343
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          344..395
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          396..441
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          442..464
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          465..488
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          489..539
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          540..562
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          563..587
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          629..811
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            635..642
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(637..643,692,747..748,750,795..797)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            660
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            664..666
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            689..692
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(691..692,708..709)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            747..750
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            795..797
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     Region          834..1026
                     /region_name="COR"
                     /note="C-terminal of Roc, COR, domain; pfam16095"
                     /db_xref="CDD:406489"
     Region          1238..1513
                     /region_name="STKc_LRRK1"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Leucine-Rich Repeat Kinase 1; cd14067"
                     /db_xref="CDD:270969"
     Site            order(1238..1242,1246,1258,1260,1310,1324..1327,1331,1333,
                     1376,1378,1380..1381,1383,1399,1402,1416..1419)
                     /site_type="active"
                     /db_xref="CDD:270969"
     Site            order(1238..1242,1246,1258,1260,1310,1324..1327,1331,1376,
                     1378,1380..1381,1383,1399)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270969"
     Site            order(1242,1331,1333,1376,1378,1380,1402,1416..1419)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270969"
     Site            1398..1419
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270969"
     CDS             1..1999
                     /gene="LRRK1"
                     /coded_by="XM_041469129.1:323..6322"
                     /db_xref="GeneID:121354466"
ORIGIN      
        1 mywcvgtees avcregsmdp qngtvdmggk qstsgdvsvt qtpvtesiqd aykagdtska
       61 qelirlscee talqvekcql lgiaaaygdl qavryllkea lvvlptepnd dnaavvaayf
      121 ghkdivkell dslrgpntcq qllnwmlaia cqqghldivk lliraysadp escavrrnef
      181 pvlirlplya aikagnedva vfllrngaff csyilmdspe sskhllrkyf iettplpgsa
      241 paktalcvnw snlklpwvdl dwlidiscqi teldlsancl vslpsvipwg linlrklsla
      301 dnqltelpsv qssdeiictr llevdvssnr lstlptgflh lknlkkltas knymeklfde
      361 enttnwiglr klqefdvsdn rlvelptvfl ycfkslniln vsrnqlkvfp dpwacplkcc
      421 kasrnalefl pdaltvfwkn hlrevdfsen slkevpaglf qlealvslkl lgnqlvtlps
      481 qdkwnckqlk sldlsknqlg ksdegfktkr ipffttknrv rggpetgpfl efpaflsdsl
      541 evlylndnql dsvpqsvcll kgltelylgn npgirelppe lgqlanlwql dieelnisnv
      601 paeirkegpk tvlaylraql rraekcklmk mivigpprqg kstlveilqt gkvpqmmhse
      661 atirttkwel pkpvghkakv dsvefnvwdi ggpasmstvn qcfftdkaly ivvwnlalge
      721 eavanlqfwl lnieakapns vvlvvgthld lietkfrver iatlrayvla lcrspsgsra
      781 tgfpditfkh lhelscktle gleglrqlif hvtcnmkdvg ssicsqklag rliprsylsl
      841 qeavlaeqhr rsqnddvqyl tdrqielmie qtpgndikdy edlqtainfl ietgtllhfp
      901 dtshglrnly fldpvwlsec lqrifnikss ksvakngvir aedlrmllvg tgfteqteeq
      961 yfqflakfei alpvannsyl lphllptkpa ldihglchht tntvqrvfkm sfvpvgfwqr
     1021 fiarmlisla emdlqlfenk kntktrnkkv tiysftgtqr nrcstfrvkr thtvywqegl
     1081 fvtfdggyls vessdvnwkk kksggikiis qsevrdfsam afitdhvnsl idqwfpalta
     1141 tesdgtllme qyvpchicaa arpeqregge raedaqyfnm edcvltaiel dyitcpnhpd
     1201 ipvslqelvp elfmtdfpar lflensklec senennvlgq ggsgtviyra ryqgkpvavk
     1261 rfqikkckgs ptsaadtmlk hlramdamkn fsefrqeasm lhslqhpciv sligisihpl
     1321 cfalelaplg slttvlaens kgssfvplgh mlthkiayqi atglaylhkk niifcdlksd
     1381 nilvwsldvr ehiniklsdy gisrqsfheg algvegtpgy qapeirpriv ydekvdmfsy
     1441 gmvlyellsg qrpvlghhql qiakklskgi rpvlgqpeev qlyrmqalmm ecwdtkpekr
     1501 plaisvvgqm kdptfatfmy llpcgkqssf fcspgqeytv vfwdgkedtr nytvvnlekg
     1561 vmevqrmscp gmklccqlkf qnalwaated qkisvyglqg mcplktplkg ldtpatvscf
     1621 lviplvkrns yvvlaglsdg lvavfsvsqg lpgdncsylc shtanrskfn ipdsdprqnp
     1681 ypvramevtn sgaevwysng pgllvidcas mdisrrlepf sppsviasia cnsechgeev
     1741 lwcldsqsnf lvmyhassyq lcaryfcgdc splrdmftiq qplaaipata pishgavens
     1801 ppgdvsivys pdvgtqilnh qdsltdycsv ssfsssppaa vtrcpsslps spmssssapf
     1861 smdfeesekf helkasldhd aspagenteh lqavkilpvk dliwiprrgg diivigleke
     1921 sgtqrgrvia vlkagelapy gtlvdaalva kdtvvccfen dnmerclavw rgwsardfdi
     1981 fyqayeelgr letcmrkrr
//
LOCUS       XP_041325064             240 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-like protein 10 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325064
VERSION     XP_041325064.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469130.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..240
                     /product="bcl-2-like protein 10 isoform X1"
                     /calculated_mol_wt=25668
     Region          5..154
                     /region_name="Bcl-2_like"
                     /note="Apoptosis regulator proteins of the Bcl-2 family,
                     named after B-cell lymphoma 2. This alignment model spans
                     what have been described as Bcl-2 homology regions BH1,
                     BH2, BH3, and BH4. Many members of this family have an
                     additional C-terminal transmembrane...; cl02575"
                     /db_xref="CDD:470624"
     Site            7..20
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Site            order(41..42,46,49..50,66..67,70..71,74..75,82,84..85,
                     87..88,92,96,140)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(74..76,81..93)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            126..140
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..240
                     /gene="BCL2L10"
                     /coded_by="XM_041469130.1:56..778"
                     /db_xref="GeneID:121354467"
ORIGIN      
        1 mprslkeeta llledyfqhr agsaalppsp taatlrraaa elerqerpff rscaplarae
       61 preaaallgr vaaqleadgg lnwgrllalv vfagtlaaal aergcsdgpr claahlaayl
      121 aeergewlea hggwdgfcrf fgrqgseage qsstignaim aaaagigmag lafllnrpsk
      181 kksiflnwlr klphqilgyk llhslpsngt nrcvpehclc mfkacclqts sglsffegvt
//
LOCUS       XP_041325065             187 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-like protein 10 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325065
VERSION     XP_041325065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..187
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..187
                     /product="bcl-2-like protein 10 isoform X2"
                     /calculated_mol_wt=19811
     Region          5..154
                     /region_name="Bcl-2_like"
                     /note="Apoptosis regulator proteins of the Bcl-2 family,
                     named after B-cell lymphoma 2. This alignment model spans
                     what have been described as Bcl-2 homology regions BH1,
                     BH2, BH3, and BH4. Many members of this family have an
                     additional C-terminal transmembrane...; cl02575"
                     /db_xref="CDD:470624"
     Site            7..20
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Site            order(41..42,46,49..50,66..67,70..71,74..75,82,84..85,
                     87..88,92,96,140)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(74..76,81..93)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            126..140
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..187
                     /gene="BCL2L10"
                     /coded_by="XM_041469131.1:59..622"
                     /db_xref="GeneID:121354467"
ORIGIN      
        1 mprslkeeta llledyfqhr agsaalppsp taatlrraaa elerqerpff rscaplarae
       61 preaaallgr vaaqleadgg lnwgrllalv vfagtlaaal aergcsdgpr claahlaayl
      121 aeergewlea hggwdgfcrf fgrqgseage qsstignaim aaaagigmag lafllvrtdp
      181 lrrslyf
//
LOCUS       XP_041325066             177 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-like protein 10 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325066
VERSION     XP_041325066.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469132.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..177
                     /product="bcl-2-like protein 10 isoform X3"
                     /calculated_mol_wt=18561
     Region          5..154
                     /region_name="Bcl-2_like"
                     /note="Apoptosis regulator proteins of the Bcl-2 family,
                     named after B-cell lymphoma 2. This alignment model spans
                     what have been described as Bcl-2 homology regions BH1,
                     BH2, BH3, and BH4. Many members of this family have an
                     additional C-terminal transmembrane...; cl02575"
                     /db_xref="CDD:470624"
     Site            7..20
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Site            order(41..42,46,49..50,66..67,70..71,74..75,82,84..85,
                     87..88,92,96,140)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(74..76,81..93)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     Site            126..140
                     /site_type="active"
                     /note="BH2 [active]"
                     /db_xref="CDD:132900"
     CDS             1..177
                     /gene="BCL2L10"
                     /coded_by="XM_041469132.1:54..587"
                     /db_xref="GeneID:121354467"
ORIGIN      
        1 mprslkeeta llledyfqhr agsaalppsp taatlrraaa elerqerpff rscaplarae
       61 preaaallgr vaaqleadgg lnwgrllalv vfagtlaaal aergcsdgpr claahlaayl
      121 aeergewlea hggwdgfcrf fgrqgseage qsstignaim aaaagigmag lafllvr
//
LOCUS       XP_041325067             322 aa            linear   VRT 06-MAY-2021
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325067
VERSION     XP_041325067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..322
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X1"
                     /calculated_mol_wt=35276
     Region          92..322
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     CDS             1..322
                     /gene="TRPM1"
                     /coded_by="XM_041469133.1:527..1495"
                     /db_xref="GeneID:121354468"
ORIGIN      
        1 mgqkawiekt fskreciyii annkdvtrcc cgqlinqhip pppsitankn eeetkqveaq
       61 pekwsvskht qayptdaygn lefqggghsn kamyirvsyd tkpdsllhlm vkdwqlelpk
      121 llisvhgglq nfemqpklkq vfgkglikaa mttgawiftg gvstgvirhv gdalkdhssk
      181 srgricaigi apwgivenke dligkdvtrv yqtmsnplsk lsvlnsshth filadngtlg
      241 kygaevklrr qlekhislqk intrlgqgvp vvgliveggp nvisivlecl redpplpvvi
      301 cdgsgrasdi lsfahkysee gg
//
LOCUS       XP_041325068            1628 aa            linear   VRT 06-MAY-2021
DEFINITION  transient receptor potential cation channel subfamily M member 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325068
VERSION     XP_041325068.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469134.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1628
                     /product="transient receptor potential cation channel
                     subfamily M member 1 isoform X2"
                     /calculated_mol_wt=184415
     Region          92..357
                     /region_name="LSDAT_euk"
                     /note="SLOG in TRPM; pfam18139"
                     /db_xref="CDD:465665"
     Region          852..1105
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          1199..1254
                     /region_name="TRPM_tetra"
                     /note="tetramerization domain of TRPM; pfam16519"
                     /db_xref="CDD:465156"
     CDS             1..1628
                     /gene="TRPM1"
                     /coded_by="XM_041469134.1:1696..6582"
                     /db_xref="GeneID:121354468"
ORIGIN      
        1 mgqkawiekt fskreciyii annkdvtrcc cgqlinqhip pppsitankn eeetkqveaq
       61 pekwsvskht qayptdaygn lefqggghsn kamyirvsyd tkpdsllhlm vkdwqlelpk
      121 llisvhgglq nfemqpklkq vfgkglikaa mttgawiftg gvstgvirhv gdalkdhssk
      181 srgricaigi apwgivenke dligkdvtrv yqtmsnplsk lsvlnsshth filadngtlg
      241 kygaevklrr qlekhislqk intrlgqgvp vvgliveggp nvisivlecl redpplpvvi
      301 cdgsgrasdi lsfahkysee ggiineslrd qllvtiqktf nynrsqahql fvilmecmkk
      361 kelitvfrmg segqhdiems iltallkgtn asapdqlsla lawnrvdiar sqifvfghhw
      421 pplgsltapd gtapekekks papqtkagrg kgkgkkkggk akeepeeetd prklellnwv
      481 nsleqamlda lvldrvdfvk lliengvnmq hfltiprlee lyntrlgppn tlhllvrdvk
      541 kgnlppdyhi slidiglvle ylmggayrcn ytrksfrtly nnlfgpkrpk alkllgmedd
      601 epptkgkkkk kkkeeeidid vddpevsrfq ypfhelmvwa vlmkrqkmal flwqrgeesm
      661 akalvackly ksmahesses elvddisqdl dnnskdfgql avelldqsyk hdeqiamkll
      721 tyelknwsns tclklavaak hrdfiahtcs qmlltdmwmg rlrmrknpgl kvimgilfpp
      781 tilfleyrsy ddysyqtske neegkekeee nadanadtgs rkgdeengkk kqkslpigtk
      841 iyefynapiv kfwfytisyl gylmlfnyii lvrmerwpsv qewivisyiv tlalekvrei
      901 lmsepgklsq kikvwlqeyw nitdlvaisv fiigailrlq nqpymgygrv iycvdiifwy
      961 irvldifgvn kylgpyvmmi gkmmidmlyf vvimlvvlms fgvarqailh pdeepswrla
     1021 rnifympywm iygevfadqi dlyameinpp cgdnlydddg krlppcipga wltpaimacy
     1081 llvanillvn lliavfnntf fevksisnqv wkfqryqlim tfhdrpvlpp pmiifshiyi
     1141 iikriccrcr kgdgdqderd rglklflnde elkklyefee qcveeyfqek edeqqssnde
     1201 rirvtserve nmsmrleevn erehfmkasl qtvdlrlsql eelssrmvna leklagidks
     1261 eltytrsras secdaayllr qssvnssdgy smykyhisgd eltyddsttp mspamrkkan
     1321 sigtredaad prmlvpehqt glhtsspnav atadhskstl eiaqnvsrah sgsgglgsek
     1381 qgvfssdgmi pqsvnqmnav tnsqsvagtd fqnaqlkver tkleatisyp ldkskamhyf
     1441 ppetfsacqt tmmksrsfif aqggklvggv nnwaseysti mdqvcpstie qwatewkyev
     1501 eqqlsqerpp eypgliseae rqaeekqmdt dddcnvgeag msasytsmpa pvkaekenfl
     1561 sakpertpgf psvrskslhs hsrkaksvkd klnrpghass vtnlvvafgs ateeqktrqe
     1621 nastetec
//
LOCUS       XP_041325069             404 aa            linear   VRT 06-MAY-2021
DEFINITION  photoreceptor-specific nuclear receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041325069
VERSION     XP_041325069.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469135.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="photoreceptor-specific nuclear receptor"
                     /calculated_mol_wt=43969
     Region          27..118
                     /region_name="NR_DBD_PNR"
                     /note="DNA-binding domain of the photoreceptor
                     cell-specific nuclear receptor (PNR) is composed of two
                     C4-type zinc fingers; cd06970"
                     /db_xref="CDD:143528"
     Site            order(35,38,52,55,71,78,88,91)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143528"
     Site            order(45..47,53..54,56,58,61,64,85..86,89,92,103,106)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143528"
     Region          189..391
                     /region_name="NR_LBD_Tlx_PNR_like"
                     /note="The ligand binding domain of Tailless-like
                     proteins, orphan nuclear receptors; cd06950"
                     /db_xref="CDD:132748"
     Site            order(218..219,223,257,261,264,278,294)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:132748"
     Site            order(228,231,235,240,245..246,248..249,252..253)
                     /site_type="active"
                     /note="putative coactivator recognition site [active]"
                     /db_xref="CDD:132748"
     CDS             1..404
                     /gene="NR2E3"
                     /coded_by="XM_041469135.1:3..1217"
                     /db_xref="GeneID:121354469"
ORIGIN      
        1 maaspagsvv sagldesptg lspapgkels pvllckvcgd tssgkhygiy acngcsgffk
       61 rsvrrkliyr cqagtglcpv dkahrnqcqa crlkkclqag mnkdavqner qprstaqvql
      121 dsiqldaelp pehvattcev ppspcpaprg pgatvtpgpr aptpptnhrf maslmtaetc
      181 aklepedade tvdvtgsepe rasgeyqvap ypaaspeniy etsarllfma vkwaknlpvf
      241 snlpfrdqvi lleeawself llcaiqwsmp lescpllavp epgpgkllpa tldvralqet
      301 lgrfkalavd ptefacmkav vlfkpetrgl kdpeqvenlq dqsqvmlgqh nrshypgqpv
      361 rfgklllllp alrfisserv ellffrrtig ntpmekllcd mfkn
//
LOCUS       XP_041325070             200 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein with multiple splicing 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325070
VERSION     XP_041325070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..200
                     /product="RNA-binding protein with multiple splicing 2"
                     /calculated_mol_wt=21712
     Region          21..96
                     /region_name="RRM_RBPMS2"
                     /note="RNA recognition motif (RRM) found in vertebrate
                     RNA-binding protein with multiple splicing 2 (RBP-MS2);
                     cd12683"
                     /db_xref="CDD:410084"
     CDS             1..200
                     /gene="RBPMS2"
                     /coded_by="XM_041469136.1:200..802"
                     /db_xref="GeneID:121354470"
ORIGIN      
        1 msnlnkdteh tngggtveee vrtlfvsglp vdikprelyl lfrpfkgyeg slikltskqp
       61 vgfvtfdsra gaeaaknaln girfdpenpq tlrlefakan tkmaksklma tpnptnihpa
      121 lgahfiardp ydltgaalip aspeawapyp lytteltpai phaaftypaa aaaaaalhaq
      181 mrwyppseat qqgwksrqfc
//
LOCUS       XP_041325071             192 aa            linear   VRT 06-MAY-2021
DEFINITION  deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325071
VERSION     XP_041325071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="deoxyuridine 5'-triphosphate
                     nucleotidohydrolase, mitochondrial isoform X1"
                     /calculated_mol_wt=20641
     Region          54..190
                     /region_name="trimeric_dUTPase"
                     /note="Trimeric dUTP diphosphatases; cl00493"
                     /db_xref="CDD:444938"
     Site            order(74..75,85,90..91,93,109,111..116,122..124,128,131,
                     138,140,142,144,148..152,155,159)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:143638"
     Site            order(113..115,128..130,133,137..138)
                     /site_type="active"
                     /db_xref="CDD:143638"
     CDS             1..192
                     /gene="DUT"
                     /coded_by="XM_041469137.1:188..766"
                     /db_xref="GeneID:121354471"
ORIGIN      
        1 marfphggga mlarclrwlr hpygrsmpas eavpqpspsk rqkgsgpgea sarlrftkls
       61 enafapsrgs araagydlys aydcvippme kavvktdiqi alpsgcygrv aprsglaakh
      121 fidvgagvid edyrgnvgvv lfnfgkesfe vkkgdriaql iceriyypel eevealddte
      181 rgeggfgstg kn
//
LOCUS       XP_041325072             166 aa            linear   VRT 06-MAY-2021
DEFINITION  deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325072
VERSION     XP_041325072.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469138.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..166
                     /product="deoxyuridine 5'-triphosphate
                     nucleotidohydrolase, mitochondrial isoform X2"
                     /calculated_mol_wt=17662
     Region          28..164
                     /region_name="trimeric_dUTPase"
                     /note="Trimeric dUTP diphosphatases; cl00493"
                     /db_xref="CDD:444938"
     Site            order(48..49,59,64..65,67,83,85..90,96..98,102,105,112,
                     114,116,118,122..126,129,133)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:143638"
     Site            order(87..89,102..104,107,111..112)
                     /site_type="active"
                     /db_xref="CDD:143638"
     CDS             1..166
                     /gene="DUT"
                     /coded_by="XM_041469138.1:121..621"
                     /db_xref="GeneID:121354471"
ORIGIN      
        1 mpaseavpqp spskrqkgsg pgeasarlrf tklsenafap srgsaraagy dlysaydcvi
       61 ppmekavvkt diqialpsgc ygrvaprsgl aakhfidvga gvidedyrgn vgvvlfnfgk
      121 esfevkkgdr iaqliceriy ypeleeveal ddtergeggf gstgkn
//
LOCUS       XP_041325073             425 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-1,3-galactosyl-O-glycosyl-glycoprotein
            beta-1,6-N-acetylglucosaminyltransferase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325073
VERSION     XP_041325073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469139.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="beta-1,3-galactosyl-O-glycosyl-glycoprotein
                     beta-1,6-N-acetylglucosaminyltransferase 3"
                     /calculated_mol_wt=48200
     Region          121..388
                     /region_name="Branch"
                     /note="Core-2/I-Branching enzyme; pfam02485"
                     /db_xref="CDD:426795"
     CDS             1..425
                     /gene="GCNT3"
                     /coded_by="XM_041469139.1:1..1278"
                     /db_xref="GeneID:121354472"
ORIGIN      
        1 mqwwqrapaa rrrwalllgp lallaaalal rgtarpdpad hsrlyrglel spsrgincsg
       61 vvrgdqtaiq eaqlnnleva nrrasptpge ylnitkdcra fketrryief plsqeeeefp
      121 iaysmiihhk idmferllrs vyapqnvycv hvdskapaaf qeavraiaac fpnvfvasrl
      181 esvvyaswsr vqadlncmqd llqspvpwry lintcgtdfp iktnaemvra lqllqgqntm
      241 eserpsaake qrwqyhytvg etisrtsqkk qppphsypmf tgsaynaltr dfvqyvfenp
      301 taqkflewsk dtyspdeyvw atlnrmpgvp ggtplsdkfq lsdmnalprl vkwqylegdi
      361 skgapyppct grhqrsiciy gvgdvpwmlq qhhllankfd pevddaavqc leaylrhkal
      421 ygrgl
//
LOCUS       XP_041325074              82 aa            linear   VRT 06-MAY-2021
DEFINITION  cortexin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325074
VERSION     XP_041325074.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469140.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..82
                     /product="cortexin-2"
                     /calculated_mol_wt=8918
     Region          11..82
                     /region_name="Cortexin"
                     /note="Cortexin of kidney; pfam11057"
                     /db_xref="CDD:314086"
     CDS             1..82
                     /gene="CTXN2"
                     /coded_by="XM_041469140.1:319..567"
                     /db_xref="GeneID:121354473"
ORIGIN      
        1 mmssnycsnt sasmsvnems afpltleqkt gfafvgilcv flglliircf killdpyssm
       61 psstwedeve gldkgtfeya la
//
LOCUS       XP_041325075              82 aa            linear   VRT 06-MAY-2021
DEFINITION  cortexin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325075
VERSION     XP_041325075.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469141.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..82
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..82
                     /product="cortexin-2"
                     /calculated_mol_wt=8918
     Region          11..82
                     /region_name="Cortexin"
                     /note="Cortexin of kidney; pfam11057"
                     /db_xref="CDD:314086"
     CDS             1..82
                     /gene="CTXN2"
                     /coded_by="XM_041469141.1:114..362"
                     /db_xref="GeneID:121354473"
ORIGIN      
        1 mmssnycsnt sasmsvnems afpltleqkt gfafvgilcv flglliircf killdpyssm
       61 psstwedeve gldkgtfeya la
//
LOCUS       XP_041325076             194 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325076
VERSION     XP_041325076.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469142.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="fibroblast growth factor 7 isoform X1"
                     /calculated_mol_wt=22513
     Region          57..192
                     /region_name="beta-trefoil_FGF7"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 7 (FGF7) and similar proteins; cd23319"
                     /db_xref="CDD:467005"
     CDS             1..194
                     /gene="FGF7"
                     /coded_by="XM_041469142.1:1..585"
                     /db_xref="GeneID:121354474"
ORIGIN      
        1 mhkwiltwil pillyrsyfy iiflmgtisl acndmtpeqm atnvncsspe rhtrsydyme
       61 ggdvrvrrlf crtqwymrid krgkvkgtre annnysilei rtvavgivai kgveseyfla
      121 mnksgrlygk kvcnedcnfi elieenhynt yasakwthkg kemfvtlnhk gvpmkgkktk
      181 kehrashflp lais
//
LOCUS       XP_041325077             177 aa            linear   VRT 06-MAY-2021
DEFINITION  fibroblast growth factor 7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325077
VERSION     XP_041325077.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469143.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..177
                     /product="fibroblast growth factor 7 isoform X2"
                     /calculated_mol_wt=20249
     Region          40..175
                     /region_name="beta-trefoil_FGF7"
                     /note="FGF domain, beta-trefoil fold, found in fibroblast
                     growth factor 7 (FGF7) and similar proteins; cd23319"
                     /db_xref="CDD:467005"
     CDS             1..177
                     /gene="FGF7"
                     /coded_by="XM_041469143.1:137..670"
                     /db_xref="GeneID:121354474"
ORIGIN      
        1 meylgiqlls kgttcndmtp eqmatnvncs sperhtrsyd ymeggdvrvr rlfcrtqwym
       61 ridkrgkvkg treannnysi leirtvavgi vaikgvesey flamnksgrl ygkkvcnedc
      121 nfielieenh yntyasakwt hkgkemfvtl nhkgvpmkgk ktkkehrash flplais
//
LOCUS       XP_041325078             512 aa            linear   VRT 06-MAY-2021
DEFINITION  aldehyde dehydrogenase family 1 member A3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325078
VERSION     XP_041325078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..512
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..512
                     /product="aldehyde dehydrogenase family 1 member A3"
                     /calculated_mol_wt=56257
     Region          27..506
                     /region_name="ALDH_F1AB_F2_RALDH1"
                     /note="NAD+-dependent retinal dehydrogenase 1, ALDH
                     families 1A, 1B, and 2-like; cd07141"
                     /db_xref="CDD:143459"
     Site            order(84..85,89,92,94,98,139,142..143,147,149..150,
                     153..157,159..160,163..170,263,266,269..270,273..274,276,
                     281,446,448,455,458,460..467,474..476,479..482,484,487,
                     492,499..504,506)
                     /site_type="other"
                     /note="homotetrameric interface [polypeptide binding]"
                     /db_xref="CDD:143459"
     Site            order(177..180,204,207,237,241..242,255,258,261,281..282,
                     314,361,364,411)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143459"
     Site            order(181,280,311,314)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143459"
     CDS             1..512
                     /gene="ALDH1A3"
                     /coded_by="XM_041469144.1:31..1569"
                     /db_xref="GeneID:121354475"
ORIGIN      
        1 maalngaven gqpdkkvppl prplrslevk ytkifinnew hestsgkkfp tynpstleki
       61 cdieegdkpd vdnaveaara afqrgspwrq mdapsrgrll hkladllerd rvilatletm
      121 dtgkpflqay fidlegcikt lryyagwadk iqgrtipvde nfvcftrhep mgvcgaitpw
      181 nfpllmlvwk mapalccgnt lvikpaeqtp ltslyigsli kevgfppgvv nivpgygpta
      241 gaaisthdsi dkiaftgstk vgklikeaas ksnlkrvtle lggknpcivc adadldlave
      301 cahqgvffnq gqcctaasrv fveeqiypef vkrsvefakk rlvgdpfdar teqgpqidqk
      361 qfdkilelie sgkkegakle cgglaiedrg lfikptvfse vtdnmriake eifgpvqpim
      421 kfksieevir ransteyglt aavftknldr altlasalqs gtvwincyna lyaqapfggf
      481 kmsgngrelg eyalaeytev ktvtiklsqk sp
//
LOCUS       XP_041325079             190 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325079
VERSION     XP_041325079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469145.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="LOW QUALITY PROTEIN: ornithine decarboxylase
                     antizyme 2"
                     /calculated_mol_wt=20951
     Region          94..181
                     /region_name="ODC_AZ"
                     /note="Ornithine decarboxylase antizyme; pfam02100"
                     /db_xref="CDD:460445"
     CDS             1..190
                     /gene="OAZ2"
                     /coded_by="XM_041469145.1:131..703"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121354477"
ORIGIN      
        1 mintqdssil plsncpqlqc crhivpgplw csdaphplsk ipggrgggrd pslsaliykd
       61 ekitvsqdvp vhegkphivh fqykvtevkt sswdavlsnq slfveipdgl ladgskegls
      121 allefaeekm kvnyvficfr ksredrapll ktfsflgfei vrpghpavps rpdvmfmvyp
      181 leqssssdee
//
LOCUS       XP_041325080            1148 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-4 complex subunit epsilon-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325080
VERSION     XP_041325080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1148
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1148
                     /product="AP-4 complex subunit epsilon-1 isoform X1"
                     /calculated_mol_wt=127097
     Region          56..600
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          1044..1144
                     /region_name="AP4E_app_platf"
                     /note="Adaptin AP4 complex epsilon appendage platform;
                     pfam14807"
                     /db_xref="CDD:464326"
     CDS             1..1148
                     /gene="AP4E1"
                     /coded_by="XM_041469146.1:19..3465"
                     /db_xref="GeneID:121354478"
ORIGIN      
        1 msdvvertls alpgllgqhd pgagpggagg pgrvsassrl gslirsital tskheeekli
       61 qqeltslkat vsaptttlrl mkecmvrliy cemlgyessf gyihaiklaq qgnllekrvg
      121 ylavslflhe nhelllllvn tvvkdlqstn lvevcmaltv vsqifpremi pavlpliedk
      181 lqhskeiirr kavqalykfy liapnqvqhi hdkfrkalcd rdagvmaasl hiylqmiken
      241 ssgykdltgs fvtilkqvvg gklsadfnyh svpapwlqiq llrilgllgk ddprtselmy
      301 dvldeslrra einhnityai lfecvqtiyt ihpksellek aakcigkfvl spkinlkylg
      361 lkaltyviqq dpnlalqhqm tiiecldhpd piikretlel lyritngqnv ivivqkmldy
      421 lkesqeeyai islvgkiael aekyapnnew fiqtmnavfs vggdvvhsdi pnnflrllae
      481 gfddekedhq lrmyavqsyl alleeedkly pqkflqvmsw vlgeyfslvt nvdpeviltk
      541 lhsllkktfv tsetkawima avtkiashts csktvdeviq efsssldtcl rqyafelkhl
      601 cedkalmksl lpfdascsdl vvdaslsfld gfvaeglghg aapykphhqr qeeklsqeka
      661 lnfepyglsf assvsssgvt grqsptglsf gsdisgnsae tghketntlk legvrklwgk
      721 egylpkkenk igkgdepqtv pcgsllagqv geppalqpdq gaslseedke kqqlastlfi
      781 glgssagvsl mgkadtatqk fkrkskinet qqlneetsdf qnsaasdfgp lldtvpinve
      841 dsegsthtrl rkaspcssdi vednlafetp qslrksvldd risanrlses slfadsniev
      901 fqpsssaqsa setplvpslp eelkelphse vvrlcesdal alhlckvwtd dslllivfvs
      961 nkttsalhav nlvfeetehf qilesatsqf pvieaqsveh cqkcvrmnkv rtqailpgsv
     1021 syqsemethl efsvtlslmd firpmemtte dfgklwlsls ndvkqnikms scqdslsaal
     1081 gtlqqklklh rvdvignegi lacqllpsvp cllhcrthsg mlalwfrspc aalpdgllyq
     1141 cqkvmees
//
LOCUS       XP_041325081            1068 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-4 complex subunit epsilon-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325081
VERSION     XP_041325081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1068
                     /product="AP-4 complex subunit epsilon-1 isoform X2"
                     /calculated_mol_wt=118939
     Region          2..520
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          964..1064
                     /region_name="AP4E_app_platf"
                     /note="Adaptin AP4 complex epsilon appendage platform;
                     pfam14807"
                     /db_xref="CDD:464326"
     CDS             1..1068
                     /gene="AP4E1"
                     /coded_by="XM_041469147.1:203..3409"
                     /db_xref="GeneID:121354478"
ORIGIN      
        1 mkecmvrliy cemlgyessf gyihaiklaq qgnllekrvg ylavslflhe nhelllllvn
       61 tvvkdlqstn lvevcmaltv vsqifpremi pavlpliedk lqhskeiirr kavqalykfy
      121 liapnqvqhi hdkfrkalcd rdagvmaasl hiylqmiken ssgykdltgs fvtilkqvvg
      181 gklsadfnyh svpapwlqiq llrilgllgk ddprtselmy dvldeslrra einhnityai
      241 lfecvqtiyt ihpksellek aakcigkfvl spkinlkylg lkaltyviqq dpnlalqhqm
      301 tiiecldhpd piikretlel lyritngqnv ivivqkmldy lkesqeeyai islvgkiael
      361 aekyapnnew fiqtmnavfs vggdvvhsdi pnnflrllae gfddekedhq lrmyavqsyl
      421 alleeedkly pqkflqvmsw vlgeyfslvt nvdpeviltk lhsllkktfv tsetkawima
      481 avtkiashts csktvdeviq efsssldtcl rqyafelkhl cedkalmksl lpfdascsdl
      541 vvdaslsfld gfvaeglghg aapykphhqr qeeklsqeka lnfepyglsf assvsssgvt
      601 grqsptglsf gsdisgnsae tghketntlk legvrklwgk egylpkkenk igkgdepqtv
      661 pcgsllagqv geppalqpdq gaslseedke kqqlastlfi glgssagvsl mgkadtatqk
      721 fkrkskinet qqlneetsdf qnsaasdfgp lldtvpinve dsegsthtrl rkaspcssdi
      781 vednlafetp qslrksvldd risanrlses slfadsniev fqpsssaqsa setplvpslp
      841 eelkelphse vvrlcesdal alhlckvwtd dslllivfvs nkttsalhav nlvfeetehf
      901 qilesatsqf pvieaqsveh cqkcvrmnkv rtqailpgsv syqsemethl efsvtlslmd
      961 firpmemtte dfgklwlsls ndvkqnikms scqdslsaal gtlqqklklh rvdvignegi
     1021 lacqllpsvp cllhcrthsg mlalwfrspc aalpdgllyq cqkvmees
//
LOCUS       XP_041325083             475 aa            linear   VRT 06-MAY-2021
DEFINITION  SH2 domain-containing adapter protein F isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325083
VERSION     XP_041325083.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469149.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="SH2 domain-containing adapter protein F isoform
                     X1"
                     /calculated_mol_wt=51412
     Region          373..470
                     /region_name="SH2_SHF"
                     /note="Src homology 2 domain found in SH2
                     domain-containing adapter protein F (SHF); cd10392"
                     /db_xref="CDD:198255"
     Site            order(382,400,421,423)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198255"
     Site            order(422,451)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198255"
     CDS             1..475
                     /gene="SHF"
                     /coded_by="XM_041469149.1:40..1467"
                     /db_xref="GeneID:121354479"
ORIGIN      
        1 mllsgaagse rggcsggaga ggapqcvgtm arwlrehlgf rsarpappap pkpdyragpp
       61 pqpplppgga aeplaaaqpd ivaayrlqke rdfedpysgp ppaaapdgpr yvspkhrlik
      121 veavekvpas psppppvpap pssppagpep pdeppqelav ledyadpfda aqvagsqagl
      181 ekvmendgym epyeaqkmma eirqkglrea parplhlydt pyepvldmds dcsacprpre
      241 srlpedderp peeydqpwew kkeriskafa veikvikdlp wpppvgqlds sesppdgeag
      301 apippqhgqh syedangpse glgygrtspc reekaravlr hgssslkntk tltaepgpfv
      361 geridpalpl esqcwyhgai srtdaetllr lckeasylvr nsetskndfs lslkssqgfm
      421 hmklsrtqen kyvlgqhspp fdsvpeiihh yasrklpikg aehmsllypv airtl
//
LOCUS       XP_041325084             429 aa            linear   VRT 06-MAY-2021
DEFINITION  SH2 domain-containing adapter protein F isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325084
VERSION     XP_041325084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469150.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..429
                     /product="SH2 domain-containing adapter protein F isoform
                     X2"
                     /calculated_mol_wt=46530
     Region          327..424
                     /region_name="SH2_SHF"
                     /note="Src homology 2 domain found in SH2
                     domain-containing adapter protein F (SHF); cd10392"
                     /db_xref="CDD:198255"
     Site            order(336,354,375,377)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198255"
     Site            order(376,405)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198255"
     CDS             1..429
                     /gene="SHF"
                     /coded_by="XM_041469150.1:40..1329"
                     /db_xref="GeneID:121354479"
ORIGIN      
        1 mllsgaagse rggcsggaga ggapqcvgtm arwlrehlgf rsarpappap pkpdyragpp
       61 pqpplppgga aeplaaaqpd ivaayrlqke rdfedpysgp ppaaapdgpr yvspkhrlik
      121 veavekvpas psppppvpap pssppagpep pdeppqelav ledyadpfda aqvagsqagl
      181 ekvmendgym epyeaqkmma eirqkglrea parplhlydt pyepvldmds dcsacprpre
      241 srlpedderp peeydqpwew kkeriskafa gpseglgygr tspcreekar avlrhgsssl
      301 kntktltaep gpfvgeridp alplesqcwy hgaisrtdae tllrlckeas ylvrnsetsk
      361 ndfslslkss qgfmhmklsr tqenkyvlgq hsppfdsvpe iihhyasrkl pikgaehmsl
      421 lypvairtl
//
LOCUS       XP_041325085             769 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Lines homolog 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325085
VERSION     XP_041325085.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469151.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="protein Lines homolog 1"
                     /calculated_mol_wt=85580
     Region          195..549
                     /region_name="LINES_N"
                     /note="Lines N-terminus; pfam14694"
                     /db_xref="CDD:464266"
     Region          727..760
                     /region_name="LINES_C"
                     /note="Lines C-terminus; pfam14695"
                     /db_xref="CDD:464267"
     CDS             1..769
                     /gene="LINS1"
                     /coded_by="XM_041469151.1:261..2570"
                     /db_xref="GeneID:121354480"
ORIGIN      
        1 mkisllqqmy knvlagipla reshyyssli nlcveqppeg deschqqhlp staggigshe
       61 dtdmsdvvpa tddlsnsfan msssfcprev tllqltlikm mvakaesqet elhtrqkyce
      121 ifvlllkeak idsklihllg sddrllshma sqslaslvyf qlkeqdalnv pwlsfslaal
      181 lgfpgsarva aclwtlaail ketlkdalva ragalkklla pldavlegfy saillhhfds
      241 hhytspysea annlisfidl leallvsrte lelplrcqri lflkvsyvln visssvpyvi
      301 kkksilllkk cvlyksreda tggsvflqts slcedmlals nvvlqvvnlt wlnqiplsgk
      361 ssyfgsseta pghdsqgasd qtvlralslv vlkalefkih nsqkeaeikg dfessmsqll
      421 mfwgshvkps pqsypaghhc eclslvfmeq dddmweaaka llliylkfdr lrrgatdnls
      481 qkeeeswqfl vhaggynphc iflfflekig fdstvlldfl issetcfley lvrylkllgk
      541 ewhqfvdvcn hfdtrhstfh lvcsvkpphq ekqnfvages lqnavcaaep qtaealapsh
      601 ncpvftaqqg dneaaewnqs dsltgtdsts lprslqslvn ydssedseve sdgkeclvnt
      661 kqlpsnnege vrrretgcsc rdddwnprts gvsplkpkgs ptsscwtcma spdntaplrv
      721 mlykstkcle elreavsrlq rrnlfpynps allkllshve kmsksmnpq
//
LOCUS       XP_041325086             381 aa            linear   VRT 06-MAY-2021
DEFINITION  ceramide synthase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325086
VERSION     XP_041325086.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469152.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="ceramide synthase 3"
                     /calculated_mol_wt=45228
     Region          74..125
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(75,78,119,122..123)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          134..335
                     /region_name="TLC"
                     /note="TRAM, LAG1 and CLN8 homology domains; smart00724"
                     /db_xref="CDD:214789"
     CDS             1..381
                     /gene="CERS3"
                     /coded_by="XM_041469152.1:140..1285"
                     /db_xref="GeneID:121354481"
ORIGIN      
        1 mayilktlns wfwweniwmp inctwadfvd rdglvfpkph qlyatipyaf vlliirffte
       61 ryvaiplaka lgiknvrrvk pqpnpvlesy frecsrqpsq seikglakkc nctvhlvekw
      121 frrrrnleip tvlrkfqeaf wrfsfyltss ivgfiflydk pwfydiwqtw vgypfqtllp
      181 sqywyymaei gfywsliftl gidikrkdfm ahvvhhlaai glmsgswcgn yvrlgtlvif
      241 vhdtadfwle aakmfnyarw ektcnilfii fsiaffitrm ilfpfwilra tlyqptyyst
      301 tpviayflfn gmlltlqglh lywgylifki lkrfvflkdl kddrsdeeee dsltdieees
      361 tksgtknssg sskhllsssh h
//
LOCUS       XP_041325087             514 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325087
VERSION     XP_041325087.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469153.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..514
                     /product="sorting nexin-1 isoform X1"
                     /calculated_mol_wt=58270
     Region          15..78
                     /region_name="Sorting_nexin"
                     /note="Sorting nexin, N-terminal domain; pfam03700"
                     /db_xref="CDD:461016"
     Region          137..260
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(178..180,206..207,230)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132814"
     Region          278..511
                     /region_name="BAR_SNX1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 1; cd07665"
                     /db_xref="CDD:153349"
     Site            order(307,310..311,314..315,317..318,321,324..325,328,
                     335..336,338..339,342,345..346,349..350,366,471,474..475,
                     477..479,482,485..486,488..490,492..493,496..497,499..500,
                     503..504,506..507)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153349"
     CDS             1..514
                     /gene="SNX1"
                     /coded_by="XM_041469153.1:31..1575"
                     /db_xref="GeneID:121354482"
ORIGIN      
        1 masggshgsr spspaerrpp pfpehrgpga pdsdsegedi ftgssnspal keepplpvss
       61 sskengvhve qddqdlfada tvelsldntq nnqkkevakp ssplppsldv aasssrnlsk
      121 syeeleeeee qedkfdltvg vsdpekvgdg mnayvaykvs tqtsmpmfrs kqfsvkrrfs
      181 dflglydkls ekhaqngfiv ppppekslig mtkvkvgked sssaeflekr raalerylrr
      241 vvshptmlqd pdvrefleke elpravgtqt lsgagimkmf nkatdavskm tikmnesdiw
      301 feeklqevec edqrlrklha vvetlvnhrk elalntaqfa kslamlgsse dntalsrals
      361 qlaeveekie qlhheqannd ffllaellgd yirllsvvrg afdqrmktwq rwqdaqtmlq
      421 kkremearll wankpdklqq akdeisewes rvtqyerdfe risavirkev irfekekskd
      481 frnhvtkyle tllnsqqqlv kyweaflpea kais
//
LOCUS       XP_041325088             496 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325088
VERSION     XP_041325088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..496
                     /product="sorting nexin-1 isoform X2"
                     /calculated_mol_wt=56654
     Region          <24..60
                     /region_name="Sorting_nexin"
                     /note="Sorting nexin, N-terminal domain; pfam03700"
                     /db_xref="CDD:461016"
     Region          119..242
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(160..162,188..189,212)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132768"
     Region          260..493
                     /region_name="BAR_SNX1"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Sorting
                     Nexin 1; cd07665"
                     /db_xref="CDD:153349"
     Site            order(289,292..293,296..297,299..300,303,306..307,310,
                     317..318,320..321,324,327..328,331..332,348,453,456..457,
                     459..461,464,467..468,470..472,474..475,478..479,481..482,
                     485..486,488..489)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153349"
     CDS             1..496
                     /gene="SNX1"
                     /coded_by="XM_041469154.1:1188..2678"
                     /db_xref="GeneID:121354482"
ORIGIN      
        1 mqasvtamle qlclllgrtg whkssqsnsp alkeepplpv sssskengvh veqddqdlfa
       61 datvelsldn tqnnqkkeva kpssplppsl dvaasssrnl sksyeeleee eeqedkfdlt
      121 vgvsdpekvg dgmnayvayk vstqtsmpmf rskqfsvkrr fsdflglydk lsekhaqngf
      181 ivppppeksl igmtkvkvgk edsssaefle krraaleryl rrvvshptml qdpdvrefle
      241 keelpravgt qtlsgagimk mfnkatdavs kmtikmnesd iwfeeklqev ecedqrlrkl
      301 havvetlvnh rkelalntaq fakslamlgs sedntalsra lsqlaeveek ieqlhheqan
      361 ndffllaell gdyirllsvv rgafdqrmkt wqrwqdaqtm lqkkremear llwankpdkl
      421 qqakdeisew esrvtqyerd ferisavirk evirfekeks kdfrnhvtky letllnsqqq
      481 lvkyweaflp eakais
//
LOCUS       XP_041325089             158 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM117B-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325089
VERSION     XP_041325089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..158
                     /product="protein FAM117B-like"
                     /calculated_mol_wt=15586
     CDS             1..158
                     /gene="LOC121354483"
                     /coded_by="XM_041469155.1:21..497"
                     /db_xref="GeneID:121354483"
ORIGIN      
        1 mgtpgeappa rstgtarpcr arsaaasgae rprppwkspe gggsprrggg gggggggseg
       61 rsqgktgagr arsgarerpe raggqpdtpa anagpatppr rhraslsrwn sasrqtsssp
      121 pppppppaat tsgvtagppa ecprmvraap agsrerrr
//
LOCUS       XP_041325090            1094 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM214A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325090
VERSION     XP_041325090.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469156.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1094
                     /product="protein FAM214A isoform X1"
                     /calculated_mol_wt=121997
     Region          896..953
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1036..1093
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1094
                     /gene="FAM214A"
                     /coded_by="XM_041469156.1:116..3400"
                     /db_xref="GeneID:121354484"
ORIGIN      
        1 mpdselssat nsddtldeyf eyeaeeflvs lallitegrt pehsikgrte gfhcppaqss
       61 qppttkhecs dklaqcrqar rtrsevmllw knnipimvev mllpdccysd egpttegndl
      121 ndpaikqdal llerwilepv prqsgdrfie ektlllavrs fvffsqlsaw lsvshgavpr
      181 nilyrvsaad vdlqwtfsqt ptehvfpvpn vshnvalrvs vqslprqsny pvltcsihtn
      241 lsfyekqmqe rkfhqrsdpg aaqqcstssp lrfrgkqtwt vtpegllngk kmpefttsfr
      301 nlklypstgl gsdfgasqsk vqcynatadn ktqshetpvr tfksyslvds rvsnshcshq
      361 ptgetnplig sllqerqevi ariaqhlihc dpatspvvag rpftthenis atpkafrstf
      421 eeenlprksk esspvpaanl dsaiqedgde gktravpevt llnarvpgnh cgrqsagegn
      481 plidsllqer qeviariaqh lihcdpatsh vaghpfkahe aspvtskifr styedenllk
      541 kgkepssvss akskfslsed ssksgtktpd tpispsrfdg elktslkvqa rrklvlakps
      601 eavqnsfhqt snktshafss ihissscike nkseipdkle ihsgyaqkdq itnrikqgsn
      661 sssideqict nklkertvvs enngtdsfnn lqiekcrile gtkkatvipi sdslhknelk
      721 cldrdskkpv iyeqntqlvs ienylnkdhd sfktktkqdk tksahdened pigldfqsts
      781 qkkpaednvv kcerqknpdv qkapplkhtn twrkhnfrsl dgtstkafhp rtglpllssp
      841 vpqrktqsgc fdldssllkc lsarspqqci nkdgdpdshg kpflsssapp vtslsllgnf
      901 eesvlnfrld plgvvegfta evgasgvfcp thmtlpvevs fysvsddnap spymgvitle
      961 slgkrgyrvp psgtiqvtlf npnktvvkmf vviydlremp anhqtflrqr tfsvpvrrei
     1021 krnvnkensh qteerllryl ihlrfqssks gkiylhrdvr llfsrksmev dsgaayelks
     1081 ytesptnpqf sprc
//
LOCUS       XP_041325091            1086 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM214A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325091
VERSION     XP_041325091.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469157.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1086
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1086
                     /product="protein FAM214A isoform X2"
                     /calculated_mol_wt=121303
     Region          888..945
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          1028..1085
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1086
                     /gene="FAM214A"
                     /coded_by="XM_041469157.1:131..3391"
                     /db_xref="GeneID:121354484"
ORIGIN      
        1 mkperdtlde yfeyeaeefl vslalliteg rtpehsikgr tegfhcppaq ssqppttkhe
       61 csdklaqcrq arrtrsevml lwknnipimv evmllpdccy sdegpttegn dlndpaikqd
      121 alllerwile pvprqsgdrf ieektlllav rsfvffsqls awlsvshgav prnilyrvsa
      181 advdlqwtfs qtptehvfpv pnvshnvalr vsvqslprqs nypvltcsih tnlsfyekqm
      241 qerkfhqrsd pgaaqqcsts splrfrgkqt wtvtpeglln gkkmpeftts frnlklypst
      301 glgsdfgasq skvqcynata dnktqshetp vrtfksyslv dsrvsnshcs hqptgetnpl
      361 igsllqerqe viariaqhli hcdpatspvv agrpftthen isatpkafrs tfeeenlprk
      421 skesspvpaa nldsaiqedg degktravpe vtllnarvpg nhcgrqsage gnplidsllq
      481 erqeviaria qhlihcdpat shvaghpfka heaspvtski frstyedenl lkkgkepssv
      541 ssakskfsls edssksgtkt pdtpispsrf dgelktslkv qarrklvlak pseavqnsfh
      601 qtsnktshaf ssihisssci kenkseipdk leihsgyaqk dqitnrikqg snsssideqi
      661 ctnklkertv vsenngtdsf nnlqiekcri legtkkatvi pisdslhkne lkcldrdskk
      721 pviyeqntql vsienylnkd hdsfktktkq dktksahden edpigldfqs tsqkkpaedn
      781 vvkcerqknp dvqkapplkh tntwrkhnfr sldgtstkaf hprtglplls spvpqrktqs
      841 gcfdldssll kclsarspqq cinkdgdpds hgkpflsssa ppvtslsllg nfeesvlnfr
      901 ldplgvvegf taevgasgvf cpthmtlpve vsfysvsddn apspymgvit leslgkrgyr
      961 vppsgtiqvt lfnpnktvvk mfvviydlre mpanhqtflr qrtfsvpvrr eikrnvnken
     1021 shqteerllr ylihlrfqss ksgkiylhrd vrllfsrksm evdsgaayel ksytesptnp
     1081 qfsprc
//
LOCUS       XP_041325092            1008 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM214A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325092
VERSION     XP_041325092.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469158.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1008
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1008
                     /product="protein FAM214A isoform X3"
                     /calculated_mol_wt=112356
     Region          810..867
                     /region_name="DUF4210"
                     /note="Domain of unknown function (DUF4210); pfam13915"
                     /db_xref="CDD:404751"
     Region          950..1007
                     /region_name="Chromosome_seg"
                     /note="Chromosome segregation during meiosis; pfam13889"
                     /db_xref="CDD:464021"
     CDS             1..1008
                     /gene="FAM214A"
                     /coded_by="XM_041469158.1:489..3515"
                     /db_xref="GeneID:121354484"
ORIGIN      
        1 mllwknnipi mvevmllpdc cysdegptte gndlndpaik qdalllerwi lepvprqsgd
       61 rfieektlll avrsfvffsq lsawlsvshg avprnilyrv saadvdlqwt fsqtptehvf
      121 pvpnvshnva lrvsvqslpr qsnypvltcs ihtnlsfyek qmqerkfhqr sdpgaaqqcs
      181 tssplrfrgk qtwtvtpegl lngkkmpeft tsfrnlklyp stglgsdfga sqskvqcyna
      241 tadnktqshe tpvrtfksys lvdsrvsnsh cshqptgetn pligsllqer qeviariaqh
      301 lihcdpatsp vvagrpftth enisatpkaf rstfeeenlp rkskesspvp aanldsaiqe
      361 dgdegktrav pevtllnarv pgnhcgrqsa gegnplidsl lqerqeviar iaqhlihcdp
      421 atshvaghpf kaheaspvts kifrstyede nllkkgkeps svssakskfs lsedssksgt
      481 ktpdtpisps rfdgelktsl kvqarrklvl akpseavqns fhqtsnktsh afssihisss
      541 cikenkseip dkleihsgya qkdqitnrik qgsnssside qictnklker tvvsenngtd
      601 sfnnlqiekc rilegtkkat vipisdslhk nelkcldrds kkpviyeqnt qlvsienyln
      661 kdhdsfktkt kqdktksahd enedpigldf qstsqkkpae dnvvkcerqk npdvqkappl
      721 khtntwrkhn frsldgtstk afhprtglpl lsspvpqrkt qsgcfdldss llkclsarsp
      781 qqcinkdgdp dshgkpflss sappvtslsl lgnfeesvln frldplgvve gftaevgasg
      841 vfcpthmtlp vevsfysvsd dnapspymgv itleslgkrg yrvppsgtiq vtlfnpnktv
      901 vkmfvviydl rempanhqtf lrqrtfsvpv rreikrnvnk enshqteerl lrylihlrfq
      961 ssksgkiylh rdvrllfsrk smevdsgaay elksytespt npqfsprc
//
LOCUS       XP_041325093            1074 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 72 [Pyrgilauda ruficollis].
ACCESSION   XP_041325093
VERSION     XP_041325093.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469159.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1074
                     /product="WD repeat-containing protein 72"
                     /calculated_mol_wt=120072
     Region          14..>191
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          20..60
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          66..107
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          112..151
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          160..206
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..259
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          405..457
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <423..614
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          511..553
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          558..594
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1074
                     /gene="WDR72"
                     /coded_by="XM_041469159.1:1..3225"
                     /db_xref="GeneID:121354486"
ORIGIN      
        1 mkpsvpavav wgrtapshsi tavmitddqq tivtgsqegq iclwdlssdl qisskeilfg
       61 htasvtclak arefekqpyv vsatengemc vwnvtsgqci vnaklpyrht aihyyhcsfr
      121 mtgegwllcc geyqdvliid aktldvlhtl sssqssdwin cmcivhsari qedslvavsv
      181 agvlkvwdls sslnsiqekq svcekesksl dcvncqavrf ctyterlllv vssmcwqvyd
      241 ycdfsllcte fcksgqcfag gevlaayrli iwtedghsyi yqllnsglsk stypadgkvl
      301 ketvyphlls ftgmkenksl pfvmgfmner kepfykvlfs geasgritlw hvpdvpvstf
      361 dgspkeipit tmwtlqdsfd khhsmsegii dqlcgsedgf gstvvsssvy ipgldklvcg
      421 cengkifvtl gletararll enisflkdnl pykvlnghss rvtcllyphd ksvrfdpswl
      481 lsggqdsvvi cwdiftggil qqfnlqsgav tellrspehy rlkdqsivcc vcsdhsvail
      541 hlqkrqcllh arkhlfpvkk ikfdplenvl ivgcednsvy iweietgtle rhetgdtara
      601 iltaiedsey ivagallpvs qeskqnknsg ykhsssykhg mgpypahaek ssdkltdtsc
      661 iqqpftilpa ktkwnsanfh illfdlekle ellssqlngl kssksfhnqy tlerakstse
      721 kraltlkrnk taafvpqvdg qeetvysdqv hrdnnparpm eegggikrwk kmkssrkirm
      781 qkesgnidmn iatdtaklll scllpwgvdk eidnlcvrhl nilrlqcpvs fglvsdeshl
      841 slmlpgwkct dcgglgehgv fnlfskrvld lsnkylvatq gqfgkkdgpe nndygtrdle
      901 tlfflfsria linriintps avtdeiespq kpesvhdkwr nveditlscp nfyaqlpssk
      961 sryhspdfgs isllkliccw ndqsvkivea mqavllaevq rtinplrkta icreplarve
     1021 ngnvsvlkhd kssksanfqd vedtsdrcvl eesespddmk qhpwiskvcs ckvc
//
LOCUS       XP_041325094             644 aa            linear   VRT 06-MAY-2021
DEFINITION  mucosa-associated lymphoid tissue lymphoma translocation protein 1
            homolog isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325094
VERSION     XP_041325094.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469160.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..644
                     /product="mucosa-associated lymphoid tissue lymphoma
                     translocation protein 1 homolog isoform X1"
                     /calculated_mol_wt=71884
     Region          6..>39
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          22..26
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          35..39
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          105..172
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          200..376
                     /region_name="COG4249"
                     /note="Uncharacterized conserved protein, contains caspase
                     domain [General function prediction only]"
                     /db_xref="CDD:443391"
     Region          436..564
                     /region_name="MALT1_Ig"
                     /note="MALT1 Ig-like domain; pfam18703"
                     /db_xref="CDD:465840"
     CDS             1..644
                     /gene="LOC121354487"
                     /coded_by="XM_041469160.1:111..2045"
                     /db_xref="GeneID:121354487"
ORIGIN      
        1 mqeaitiieq pvsvsvpvgy sftlrcraqg rtslqyqwfc qyqsdcrlip gatnqdlpii
       61 aeqtqlytcr vndlhrnavf sdwvkvevhq cvarglpprl wqgepvivln preqrvevgq
      121 plqlqcaamg vpapsyqwyr ngnlleqqkr kklwithtkv sdsgtylcca snshgehwtn
      181 avdvhvgtcp gsgkffatgk iallvgnnry qhhpnlmapv rdvfelrhll ehlgfqvvsl
      241 ldlnkaemat avtqflqllg kgvyaifyya ghgyehlgrn ymvpvdapqp yapencisvq
      301 rilqkmqqqq talniilldt crkwynpgra lsqvqplepw gntvygysts edaeayelqd
      361 gefssgifmk ylkkhilqek kvthmledvl edigrdplvt gkqvmeikht lkearsltdp
      421 icplgaaaeh wghgqelpsr tvtfpcgarv elrflrlfsn lmfvcakpqp plahitepql
      481 llrqlaevdd vaiqrescld hvetllasvy kreeldcvfq lcalqkiqtd vvlqldlhyt
      541 qpstnqrtce slqttlqksl lrqlfsqgkd sqaapastgs vcpqdalgqs tepkgqgsls
      601 tgsghslpss spsnfssepe endeselgql csalpragpg qdrp
//
LOCUS       XP_041325095             576 aa            linear   VRT 06-MAY-2021
DEFINITION  mucosa-associated lymphoid tissue lymphoma translocation protein
            1-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325095
VERSION     XP_041325095.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469161.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..576
                     /product="mucosa-associated lymphoid tissue lymphoma
                     translocation protein 1-like isoform X2"
                     /calculated_mol_wt=64291
     Region          6..>39
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          22..26
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          35..39
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          105..172
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          <197..308
                     /region_name="Raptor_N"
                     /note="Raptor N-terminal CASPase like domain; cl46306"
                     /db_xref="CDD:480646"
     Region          368..496
                     /region_name="MALT1_Ig"
                     /note="MALT1 Ig-like domain; pfam18703"
                     /db_xref="CDD:465840"
     CDS             1..576
                     /gene="LOC121354487"
                     /coded_by="XM_041469161.1:111..1841"
                     /db_xref="GeneID:121354487"
ORIGIN      
        1 mqeaitiieq pvsvsvpvgy sftlrcraqg rtslqyqwfc qyqsdcrlip gatnqdlpii
       61 aeqtqlytcr vndlhrnavf sdwvkvevhq cvarglpprl wqgepvivln preqrvevgq
      121 plqlqcaamg vpapsyqwyr ngnlleqqkr kklwithtkv sdsgtylcca snshgehwtn
      181 avdvhvgtcp gsgkffaify yaghgyehlg rnymvpvdap qpyapencis vqrilqkmqq
      241 qqtalniill dtcrkwynpg ralsqvqple pwgntvygys tsedaeayel qdgefssgif
      301 mkylkkhilq ekkvthmled vledigrdpl vtgkqvmeik htlkearslt dpicplgaaa
      361 ehwghgqelp srtvtfpcga rvelrflrlf snlmfvcakp qpplahitep qlllrqlaev
      421 ddvaiqresc ldhvetllas vykreeldcv fqlcalqkiq tdvvlqldlh ytqpstnqrt
      481 ceslqttlqk sllrqlfsqg kdsqaapast gsvcpqdalg qstepkgqgs lstgsghslp
      541 ssspsnfsse peendeselg qlcsalprag pgqdrp
//
LOCUS       XP_041325096             194 aa            linear   VRT 06-MAY-2021
DEFINITION  calmodulin-like protein 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325096
VERSION     XP_041325096.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469162.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="calmodulin-like protein 4 isoform X1"
                     /calculated_mol_wt=21547
     Region          53..188
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..194
                     /gene="CALML4"
                     /coded_by="XM_041469162.1:33..617"
                     /db_xref="GeneID:121354489"
ORIGIN      
        1 mafpggsrgp rcrshgsgiy sslrppartl apgkapsgrc rgsrsagsvp knefkecfsl
       61 ydkkqkgkik asdllavmrc lgasptpgev qrhlqlhrid rnaeldfstf lnimyrqmkq
      121 eepeeeilra lamidrqkrg viaapelrak ltrlgeklsd eevddllrea kvgpngtiky
      181 eefvhhiclp svdy
//
LOCUS       XP_041325097             190 aa            linear   VRT 06-MAY-2021
DEFINITION  calmodulin-like protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325097
VERSION     XP_041325097.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469163.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="calmodulin-like protein 4 isoform X2"
                     /calculated_mol_wt=21285
     Region          38..184
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..190
                     /gene="CALML4"
                     /coded_by="XM_041469163.1:32..604"
                     /db_xref="GeneID:121354489"
ORIGIN      
        1 maagfipasa rprglwprvk rrvaaaagpg aqgvspkmak flsqdqinef kecfslydkk
       61 qkgkikasdl lavmrclgas ptpgevqrhl qlhridrnae ldfstflnim yrqmkqeepe
      121 eeilralami drqkrgviaa pelrakltrl geklsdeevd dllreakvgp ngtikyeefv
      181 hhiclpsvdy
//
LOCUS       XP_041325098             169 aa            linear   VRT 06-MAY-2021
DEFINITION  calmodulin-like protein 4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325098
VERSION     XP_041325098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..169
                     /product="calmodulin-like protein 4 isoform X3"
                     /calculated_mol_wt=18749
     Region          42..163
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..169
                     /gene="CALML4"
                     /coded_by="XM_041469164.1:32..541"
                     /db_xref="GeneID:121354489"
ORIGIN      
        1 maagfipasa rprglwprvk rrvaaaagpg aqgvspkmkq kgkikasdll avmrclgasp
       61 tpgevqrhlq lhridrnael dfstflnimy rqmkqeepee eilralamid rqkrgviaap
      121 elrakltrlg eklsdeevdd llreakvgpn gtikyeefvh hiclpsvdy
//
LOCUS       XP_041325099             230 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-22 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325099
VERSION     XP_041325099.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469165.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..230
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..230
                     /product="sorting nexin-22 isoform X1"
                     /calculated_mol_wt=24962
     Region          29..157
                     /region_name="PX_SNX22"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 22; cd06880"
                     /db_xref="CDD:132790"
     Site            order(84..86,107..108,120)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132790"
     CDS             1..230
                     /gene="SNX22"
                     /coded_by="XM_041469165.1:276..968"
                     /db_xref="GeneID:121354490"
ORIGIN      
        1 mgarggpcpa paplparpar gpaapramia vsipaaeppe agsperahtv rdgaergagg
       61 rlrsgkvfrv evlcngrrht vtkrysefqa lhkrikktck vpdfparhvp nwmpkvleqr
      121 rqglelylqg vlyhneelpq dildflkvrq cqqspkassl pstrllpsqr pilgfrsdpy
      181 vrphgtellp navlsgvlqg lylplscapg paasrasgmm sstqhpgmqw
//
LOCUS       XP_041325100             229 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-22 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325100
VERSION     XP_041325100.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469166.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="sorting nexin-22 isoform X2"
                     /calculated_mol_wt=24875
     Region          29..157
                     /region_name="PX_SNX22"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 22; cd06880"
                     /db_xref="CDD:132790"
     Site            order(84..86,107..108,120)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132790"
     CDS             1..229
                     /gene="SNX22"
                     /coded_by="XM_041469166.1:281..970"
                     /db_xref="GeneID:121354490"
ORIGIN      
        1 mgarggpcpa paplparpar gpaapramia vsipaaeppe agsperahtv rdgaergagg
       61 rlrsgkvfrv evlcngrrht vtkrysefqa lhkrikktck vpdfparhvp nwmpkvleqr
      121 rqglelylqg vlyhneelpq dildflkvrq cqqspkassl ptrllpsqrp ilgfrsdpyv
      181 rphgtellpn avlsgvlqgl ylplscapgp aasrasgmms stqhpgmqw
//
LOCUS       XP_041325101             213 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-22 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325101
VERSION     XP_041325101.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469167.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..213
                     /product="sorting nexin-22 isoform X3"
                     /calculated_mol_wt=23238
     Region          29..140
                     /region_name="PX_SNX22"
                     /note="The phosphoinositide binding Phox Homology domain
                     of Sorting Nexin 22; cd06880"
                     /db_xref="CDD:132790"
     Site            order(67..69,90..91,103)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132790"
     CDS             1..213
                     /gene="SNX22"
                     /coded_by="XM_041469167.1:268..909"
                     /db_xref="GeneID:121354490"
ORIGIN      
        1 mgarggpcpa paplparpar gpaapramia vsipaaeppe agsperahtv frvevlcngr
       61 rhtvtkryse fqalhkrikk tckvpdfpar hvpnwmpkvl eqrrqglely lqgvlyhnee
      121 lpqdildflk vrqcqqspka sslpstrllp sqrpilgfrs dpyvrphgte llpnavlsgv
      181 lqglylplsc apgpaasras gmmsstqhpg mqw
//
LOCUS       XP_041325102             223 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase B [Pyrgilauda ruficollis].
ACCESSION   XP_041325102
VERSION     XP_041325102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..223
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..223
                     /product="peptidyl-prolyl cis-trans isomerase B"
                     /calculated_mol_wt=24235
     Region          52..210
                     /region_name="cyclophilin_ABH_like"
                     /note="Cyclophilin A, B and H-like cyclophilin-type
                     peptidylprolyl cis- trans isomerase (PPIase) domain. This
                     family represents the archetypal cystolic cyclophilin
                     similar to human cyclophilins A, B and H. PPIase is an
                     enzyme which accelerates protein folding...; cd01926"
                     /db_xref="CDD:238907"
     Site            order(101..102,107,158,160,168)
                     /site_type="active"
                     /db_xref="CDD:238907"
     CDS             1..223
                     /gene="PPIB"
                     /coded_by="XM_041469168.1:23..694"
                     /db_xref="GeneID:121354492"
ORIGIN      
        1 mpaarralwp gcerrrmkvl vaaaalgaal llllpaasra derkkgpkvt akvffdlrig
       61 eedagrvvig lfgktvpktv enfmalatge kgfgfkgskf hrvikdfmiq ggdftrgdgt
      121 ggksiygdrf pdenfklkhy gpgwvsmana gkdtngsqff ittvktpwld gkhvvfgkvl
      181 egmdvvrkve stktdsrdkp lkdvtivdcg tievekpfai ake
//
LOCUS       XP_041325103             522 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein MEX3B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325103
VERSION     XP_041325103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..522
                     /product="RNA-binding protein MEX3B isoform X1"
                     /calculated_mol_wt=54420
     Region          68..140
                     /region_name="KH-I_MEX3_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of MEX-3 RNA-binding proteins;
                     cd22423"
                     /db_xref="CDD:411851"
     Site            order(77..78,80..82,84..88,90..92,95,101..107,135..136,
                     139..140)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411851"
     Region          160..231
                     /region_name="KH-I_MEX3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in the family of MEX-3 RNA-binding proteins;
                     cd22424"
                     /db_xref="CDD:411852"
     Site            order(172,174..176,178..182,185..186,189,195..201,230)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411852"
     Region          465..522
                     /region_name="RING-HC_MEX3B"
                     /note="RING finger, HC subclass, found in RNA-binding
                     protein MEX3B; cd16721"
                     /db_xref="CDD:438381"
     CDS             1..522
                     /gene="MEX3B"
                     /coded_by="XM_041469169.1:295..1863"
                     /db_xref="GeneID:121354493"
ORIGIN      
        1 mpsslfadme rngsgggggg gggggggetl ddqralqial dqlsllgldn detgsiydne
       61 prkksvnmte cvpvpssehv aeivgrqgck ikalraktnt yiktpvrgee plfvvtgrke
      121 dvamarreii saaehfsmir asrnkntaln gtvpgppnlp gqttiqvrvp yrvvglvvgp
      181 kgatikriqq qthtyivtps rdkepvfevt gmpenvdrar eeieahiamr tggiieltde
      241 ndfhangtdv gfelngtgsl wskptppsit ptpgrkpfcn yrndsssslg sastdsyfgg
      301 gtggggsarl adysppspal sfshngnnnn nsangyvygg gggdvlsspd ccselpfdsp
      361 pgfdlapapp pgaallwpqf ergpaapppa rlspplhgsa agtehplarr vrsdpggrll
      421 aasyplyang lgahlpglps dssassssss ssssssscss sgvrrkgsrd csvcfesevi
      481 aalvpcghnl fcmecanric ektepqcpvc hsavtqairi fs
//
LOCUS       XP_041325104             514 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA-binding protein MEX3B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325104
VERSION     XP_041325104.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469170.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..514
                     /product="RNA-binding protein MEX3B isoform X2"
                     /calculated_mol_wt=53571
     Region          60..132
                     /region_name="KH-I_MEX3_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of MEX-3 RNA-binding proteins;
                     cd22423"
                     /db_xref="CDD:411851"
     Site            order(69..70,72..74,76..80,82..84,87,93..99,127..128,
                     131..132)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411851"
     Region          152..223
                     /region_name="KH-I_MEX3_rpt2"
                     /note="second type I K homology (KH) RNA-binding domain
                     found in the family of MEX-3 RNA-binding proteins;
                     cd22424"
                     /db_xref="CDD:411852"
     Site            order(164,166..168,170..174,177..178,181,187..193,222)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:411852"
     Region          457..514
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(463,466,478,480,484,487,499,502)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     CDS             1..514
                     /gene="MEX3B"
                     /coded_by="XM_041469170.1:140..1684"
                     /db_xref="GeneID:121354493"
ORIGIN      
        1 merngsgggg ggggggggge tlddqralqi aldqlsllgl dndetgsiyd neprkksvnm
       61 tecvpvpsse hvaeivgrqg ckikalrakt ntyiktpvrg eeplfvvtgr kedvamarre
      121 iisaaehfsm irasrnknta lngtvpgppn lpgqttiqvr vpyrvvglvv gpkgatikri
      181 qqqthtyivt psrdkepvfe vtgmpenvdr areeieahia mrtggiielt dendfhangt
      241 dvgfelngtg slwskptpps itptpgrkpf cnyrndssss lgsastdsyf gggtggggsa
      301 rladysppsp alsfshngnn nnnsangyvy gggggdvlss pdccselpfd sppgfdlapa
      361 pppgaallwp qfergpaapp parlspplhg saagtehpla rrvrsdpggr llaasyplya
      421 nglgahlpgl psdssassss sssssssssc sssgvrrkgs rdcsvcfese viaalvpcgh
      481 nlfcmecanr icektepqcp vchsavtqai rifs
//
LOCUS       XP_041325105             445 aa            linear   VRT 06-MAY-2021
DEFINITION  repulsive guidance molecule A [Pyrgilauda ruficollis].
ACCESSION   XP_041325105
VERSION     XP_041325105.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469171.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="repulsive guidance molecule A"
                     /calculated_mol_wt=49179
     Region          48..220
                     /region_name="RGM_N"
                     /note="Repulsive guidance molecule (RGM) N-terminus;
                     pfam06535"
                     /db_xref="CDD:461940"
     Region          225..404
                     /region_name="RGM_C"
                     /note="Repulsive guidance molecule (RGM) C-terminus;
                     pfam06534"
                     /db_xref="CDD:461939"
     CDS             1..445
                     /gene="RGMA"
                     /coded_by="XM_041469171.1:214..1551"
                     /db_xref="GeneID:121354494"
ORIGIN      
        1 mrpprerivv karagwmgmg rgagstalgl fqilpvflci fpsvtspcki lkcnsefwaa
       61 tsgshhlgae eapefctalr ayahctrrta rtcrgdlayh savhgiddlm vqhncskdgp
      121 tsqprlrtlp pgdsqersds peichyeksf hkhsaapnyt hcglfgdphl rtftdtfqtc
      181 kvqgawplid nnylnvqvtn tpvlpgssat atskltiifk sfqecvdqkv yqaemdelpa
      241 afvdgskngg dkhganslki tekvsgqhie iqakyigtti vvrqvgrylt favrmpeevv
      301 navedrdsqg lylclrgcpa nqqidfqtir saqasegrar rkgpslpapp eaftyetata
      361 kcreklpved lyfqscvfdl lttgdvnfml aayyafedvk mlhsnkdklh lyertrvltp
      421 gntaptgthp tlwvallclc wlcll
//
LOCUS       XP_041325107             983 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein basonuclin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325107
VERSION     XP_041325107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..983
                     /product="zinc finger protein basonuclin-1"
                     /calculated_mol_wt=110281
     Region          329..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          357..375
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          919..940
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(924,926,928,930..931,934..935,938,954,956..958,
                     960..961,965)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          947..965
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     CDS             1..983
                     /gene="BNC1"
                     /coded_by="XM_041469173.1:137..3088"
                     /db_xref="GeneID:121354495"
ORIGIN      
        1 mseairctlv ncscqcfkpg kinqrqcdqc rhgwvahals klripnlyps sqveivqsnv
       61 vfdisslmly gtqaipvrlk illdrlfsvl kqeeviqilh aldwtlqdyi rgyvlqdasg
      121 kvldhwsimt teeelatlqq flrfgetksi velmaiqeke gqsiiipppt anfdirafie
      181 scnphspnfs asldkmsptn ihpfenivnn mafmlpfqff spvpppligs pperhlieqg
      241 qdhsnetkqd lqipfsessf ltsssapfqv enersingpd itkteddall sdssshntaa
      301 klemtalspe nkmksveknt gprkgrvfct acektfydkg tlkihynavh lkikhkctie
      361 gcnmvfsslr srnrhsanpn prlhmpmnrn nrdkdlrngl tiagpgdskr teftiltpds
      421 rtissyassc tdskgqagfs sighngvlfp nlktvqpvlp fyrspvtpae lantpgtlps
      481 lplvsssipe qlvsnelpfd vlpkkksrks smpikiekea vetpnessdv asseddsrlq
      541 gvsdgeletc ehkiekrvtd rvekhphsgn swkslsgveg pkyfesvfap nnkyiedise
      601 nelqhcekev kpeenqplki vsheiiyedp khhhsdvikp mteppmyike qskhripknd
      661 cpelqhhllt ggffstlsnr gaaipcfeds kdmdhvsqha lgiqkeesrf hcdickktfk
      721 npysvkmhfk nvhlkemhic tvegcnaafp srrsrdrhss nlnlhhkllt kdtlefnnhf
      781 natyllkdma kefcqdvslk qhvgrtsvif kgmnrtgsyi fpmskiaepc sesygydpln
      841 dgavldlstt ssvksessah sswdsdggse ictmplddsd escegpslmp sdelyqdcsl
      901 tekanqnfin lpsslpitch icqktysnkg tfrahyktvh lrqlhkckip gcntmfssvr
      961 srnrhsqnpn lhkslagspt slq
//
LOCUS       XP_041325108             168 aa            linear   VRT 06-MAY-2021
DEFINITION  biogenesis of lysosome-related organelles complex 1 subunit 6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325108
VERSION     XP_041325108.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469174.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="biogenesis of lysosome-related organelles
                     complex 1 subunit 6"
                     /calculated_mol_wt=19027
     Region          46..136
                     /region_name="Snapin_Pallidin"
                     /note="Snapin/Pallidin; pfam14712"
                     /db_xref="CDD:464275"
     CDS             1..168
                     /gene="BLOC1S6"
                     /coded_by="XM_041469174.1:149..655"
                     /db_xref="GeneID:121354496"
ORIGIN      
        1 msgaerpegk eaaatgdpgr slgpsdaspd egvvedlpli dekaveqlte glishylpdl
       61 qrsksalqel tqnqvvllet leqeiskfke cnsivdinal fseakhyhnk lvnirnemmm
      121 lhektsklkk ralklqqkrq keelereqqr ekelerekql takpakrt
//
LOCUS       XP_041325109            1138 aa            linear   VRT 06-MAY-2021
DEFINITION  elongation factor-like GTPase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325109
VERSION     XP_041325109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1138
                     /product="elongation factor-like GTPase 1 isoform X1"
                     /calculated_mol_wt=126627
     Region          1..1121
                     /region_name="PRK13351"
                     /note="elongation factor G-like protein; cl46912"
                     /db_xref="CDD:481252"
     CDS             1..1138
                     /gene="EFL1"
                     /coded_by="XM_041469175.1:67..3483"
                     /db_xref="GeneID:121354497"
ORIGIN      
        1 mvltsvgkmv glqkkasgir nicilahvdh gkttladcli ssngiissrl agklryldsr
       61 edeqvrgitm kssaislhfv kgdqeylinl idspghvdfs sevstavrlc dgciivvdav
      121 egvcpqtqav lrqawlenir pvlvinkidr livelkltpq eaylhlknil eqinavtgtl
      181 ftskvleera eketesetls dtspgdqiyd wstgledtdd shlyfspehg nvvfasaidg
      241 wgfgiehfak lysqkigikp avllktlwgd yylntkakki mkgdqskgkk plfvqlvldn
      301 iwslyeavmk rdkekiekiv tslglrigar esrhadpkvh lnaicsqwlp isdavlsmvc
      361 nkipspldit aerveklmcv gartfdslpp etqelksafm kcgseetapv ivfvskmfpv
      421 dakalpqnkp rpltqeeiah rrelakrrha eklaasqgke lsektpnens pevtgntgdt
      481 kgeeqqlpge gdsvtskavk qeadnkeyfi afarvfsgvv krgqkifvlg pkydpaeslh
      541 klsspcsatd dlpavphmac ctlenlyllm greledleev pagnvlgigg lqdfvlksat
      601 lstspacppf tplnfeatpi vrvavepkhp sdmpqlvrgm kllnqadpcv qvliqetgeh
      661 vlvtagevhl qrclddlker fakvqisvsa piipfretit rppkvdmvne eigkqqkvav
      721 ihqtkedqtk ipegiqvdsd glvtintpnk qatlsvramp lpeevtrlle ensdlirtme
      781 qlntslnedk ktheinqktl drikefkqkl ekslqgrkwr navdqiwsfg prkcgpnill
      841 hnfggykrsv wqclgnsvke vgkyrdfdns ivsgfqlatl sgpmceeplm gvcfsvekwe
      901 iskagdtlsn srqdsgelda tehqqnednt ransctdegp sanehqdrnr sgtespekms
      961 khkgelllad cygpfsgqli atmkeacrya lqakpqrlma amytceimat aevlgrvyav
     1021 lskregrvlq eemkegtdvf iikavlpvae sfgfadeirk rtsglaspql vfshweiias
     1081 dpfwvpttee eylhfgekad senqarkymn avrkrkglyv eekivehaek qrtlsrnk
//
LOCUS       XP_041325111            1138 aa            linear   VRT 06-MAY-2021
DEFINITION  elongation factor-like GTPase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325111
VERSION     XP_041325111.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469177.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1138
                     /product="elongation factor-like GTPase 1 isoform X1"
                     /calculated_mol_wt=126627
     Region          1..1121
                     /region_name="PRK13351"
                     /note="elongation factor G-like protein; cl46912"
                     /db_xref="CDD:481252"
     CDS             1..1138
                     /gene="EFL1"
                     /coded_by="XM_041469177.1:36..3452"
                     /db_xref="GeneID:121354497"
ORIGIN      
        1 mvltsvgkmv glqkkasgir nicilahvdh gkttladcli ssngiissrl agklryldsr
       61 edeqvrgitm kssaislhfv kgdqeylinl idspghvdfs sevstavrlc dgciivvdav
      121 egvcpqtqav lrqawlenir pvlvinkidr livelkltpq eaylhlknil eqinavtgtl
      181 ftskvleera eketesetls dtspgdqiyd wstgledtdd shlyfspehg nvvfasaidg
      241 wgfgiehfak lysqkigikp avllktlwgd yylntkakki mkgdqskgkk plfvqlvldn
      301 iwslyeavmk rdkekiekiv tslglrigar esrhadpkvh lnaicsqwlp isdavlsmvc
      361 nkipspldit aerveklmcv gartfdslpp etqelksafm kcgseetapv ivfvskmfpv
      421 dakalpqnkp rpltqeeiah rrelakrrha eklaasqgke lsektpnens pevtgntgdt
      481 kgeeqqlpge gdsvtskavk qeadnkeyfi afarvfsgvv krgqkifvlg pkydpaeslh
      541 klsspcsatd dlpavphmac ctlenlyllm greledleev pagnvlgigg lqdfvlksat
      601 lstspacppf tplnfeatpi vrvavepkhp sdmpqlvrgm kllnqadpcv qvliqetgeh
      661 vlvtagevhl qrclddlker fakvqisvsa piipfretit rppkvdmvne eigkqqkvav
      721 ihqtkedqtk ipegiqvdsd glvtintpnk qatlsvramp lpeevtrlle ensdlirtme
      781 qlntslnedk ktheinqktl drikefkqkl ekslqgrkwr navdqiwsfg prkcgpnill
      841 hnfggykrsv wqclgnsvke vgkyrdfdns ivsgfqlatl sgpmceeplm gvcfsvekwe
      901 iskagdtlsn srqdsgelda tehqqnednt ransctdegp sanehqdrnr sgtespekms
      961 khkgelllad cygpfsgqli atmkeacrya lqakpqrlma amytceimat aevlgrvyav
     1021 lskregrvlq eemkegtdvf iikavlpvae sfgfadeirk rtsglaspql vfshweiias
     1081 dpfwvpttee eylhfgekad senqarkymn avrkrkglyv eekivehaek qrtlsrnk
//
LOCUS       XP_041325112            1069 aa            linear   VRT 06-MAY-2021
DEFINITION  elongation factor-like GTPase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325112
VERSION     XP_041325112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469178.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1069
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1069
                     /product="elongation factor-like GTPase 1 isoform X2"
                     /calculated_mol_wt=119206
     Region          1..1052
                     /region_name="PRK13351"
                     /note="elongation factor G-like protein; cl46912"
                     /db_xref="CDD:481252"
     CDS             1..1069
                     /gene="EFL1"
                     /coded_by="XM_041469178.1:220..3429"
                     /db_xref="GeneID:121354497"
ORIGIN      
        1 mkssaislhf vkgdqeylin lidspghvdf ssevstavrl cdgciivvda vegvcpqtqa
       61 vlrqawleni rpvlvinkid rlivelkltp qeaylhlkni leqinavtgt lftskvleer
      121 aeketesetl sdtspgdqiy dwstgledtd dshlyfspeh gnvvfasaid gwgfgiehfa
      181 klysqkigik pavllktlwg dyylntkakk imkgdqskgk kplfvqlvld niwslyeavm
      241 krdkekieki vtslglriga resrhadpkv hlnaicsqwl pisdavlsmv cnkipspldi
      301 taerveklmc vgartfdslp petqelksaf mkcgseetap vivfvskmfp vdakalpqnk
      361 prpltqeeia hrrelakrrh aeklaasqgk elsektpnen spevtgntgd tkgeeqqlpg
      421 egdsvtskav kqeadnkeyf iafarvfsgv vkrgqkifvl gpkydpaesl hklsspcsat
      481 ddlpavphma cctlenlyll mgreledlee vpagnvlgig glqdfvlksa tlstspacpp
      541 ftplnfeatp ivrvavepkh psdmpqlvrg mkllnqadpc vqvliqetge hvlvtagevh
      601 lqrclddlke rfakvqisvs apiipfreti trppkvdmvn eeigkqqkva vihqtkedqt
      661 kipegiqvds dglvtintpn kqatlsvram plpeevtrll eensdlirtm eqlntslned
      721 kktheinqkt ldrikefkqk lekslqgrkw rnavdqiwsf gprkcgpnil lhnfggykrs
      781 vwqclgnsvk evgkyrdfdn sivsgfqlat lsgpmceepl mgvcfsvekw eiskagdtls
      841 nsrqdsgeld atehqqnedn transctdeg psanehqdrn rsgtespekm skhkgellla
      901 dcygpfsgql iatmkeacry alqakpqrlm aamytceima taevlgrvya vlskregrvl
      961 qeemkegtdv fiikavlpva esfgfadeir krtsglaspq lvfshweiia sdpfwvptte
     1021 eeylhfgeka dsenqarkym navrkrkgly veekivehae kqrtlsrnk
//
LOCUS       XP_041325113             465 aa            linear   VRT 06-MAY-2021
DEFINITION  stabilizer of axonemal microtubules 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325113
VERSION     XP_041325113.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469179.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="stabilizer of axonemal microtubules 2"
                     /calculated_mol_wt=53080
     CDS             1..465
                     /gene="SAXO2"
                     /coded_by="XM_041469179.1:1..1398"
                     /db_xref="GeneID:121354498"
ORIGIN      
        1 mgpprcicei cscgrhrcch rptkiyddgv kpshkteyle nypgygnicp pesckpkpel
       61 qedgarmdgt ttfksdyvpy eivtrpfrpq aeyrpksgei dlgtiyqrdy nphkvgpvil
      121 arprerkhts dakvdtvpty rdhyrlwksq rtesckverd yeppserfgn pstfqddyip
      181 kqpnpppsck pcdsklpegp fdgntihrma yvihemkplf vrpreeykps dqpfedltth
      241 qrdfkgmpge qaksckpesk khgsddpfkg itefqdryqp ylvtapefhk pseyvpptdk
      301 mdlkssnrld yikhkvapra pikpapgrks tgpfqgkttt kedyqpwkvc pqglikkeee
      361 iqkptgkfas sttfrshylp hqanppqsfk pvhtlptgvp fkdetlyrte ytpkkpevcp
      421 gvnpdalgyv yvntdsqghr fyrqvspers gsdcspvpee vpavs
//
LOCUS       XP_041325114            1670 aa            linear   VRT 06-MAY-2021
DEFINITION  spatacsin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325114
VERSION     XP_041325114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1670
                     /product="spatacsin-like isoform X1"
                     /calculated_mol_wt=184561
     CDS             1..1670
                     /gene="LOC121354500"
                     /coded_by="XM_041469180.1:51..5063"
                     /db_xref="GeneID:121354500"
ORIGIN      
        1 maaagarpel rvllvprsgq prdaarvrls rarhalgtvl pagairlesl gpggagrarg
       61 svlpgawadf vwdsseddgs qssetkllal aqshdlfvye fsvedgkhnp sslhsceaet
      121 lkklleakni slpsissvki lsfgnnkfkl llnqsvlvhl tfpgedsppe tcgcfplalp
      181 pgavgriads qfcrgilfll dsagwiylfd ccdgatlgkv avalgaaqgp vsplaalavs
      241 pdlstavvts scqralavql ntyfrqfpeh llckrdpenl avkppeglde delassehsm
      301 ellsapfrtd rswkahlssl wdrvrgrrtp gspglvndln lpwyqflthl edhdpevced
      361 permvafvpr avtwaaspal qgqpgaagqq waqipvgaaq emvklecklv tgakavfvlq
      421 aqgtglslal wdfesqdvtc shfgrssayv ecsaelplcl llterglslv lfgvtqeefl
      481 trlmmfgsaa vvdslchlng wercsipiha leaglenrql dtvdlflksk esgfslsaac
      541 pgpehpggaa sqsylrnlee lrpalnllcs aiqdndmeph skpfseqlln ltltfltkql
      601 eeifvhteep deflqkaadi ltdyiirlrk flrryphpav tpghtgaeld edlpeieesq
      661 kwekltpeev iaeailsnki peaqiffrrq qhpaeslqef mqtglslvyd cllrgsprea
      721 sqllrnmgld vrqelhkicf htqdrhvrel lvkvlqeeny fsekekkiid fvhqverfys
      781 esfqekeetq plsrcsrwrr qqelagprav lgsqlgrgsp raprptvtls walcwdqllq
      841 emlllpwtpr qelrtcsaev lwmhltaqhd wlsicswiee sepsqapcdr aawpplrpdi
      901 vdrstlcspy mrqdiltkla rkgifvpsel edfelllqrl sclggvlqnp hpvpkystas
      961 gldfhaqfvl hclehslqyl lytyldyysl tpsncpvldd kelqeahpwf eflvqcrgva
     1021 snprdpkmvf qaslanaqml ipssqggvss illegrtlla lattvygpgg idqvlqnedt
     1081 ekplqkvdpq llkmaltpyp klkaalfpsc tahgilppdi slyhllqslm pfdptklfgw
     1141 qstntlavsd awselphfss pelvsrhavq erldfpfyll hgrpafafgt fvgqqlarsr
     1201 aprqlvqqaa reaqllalsc lgvpsvaaac vcflellghd slglrvdlga asllcshscs
     1261 rdasphglsr dslvekltkl adgekaaaaa lltsleeafw daieqqgikr tssdsrrqwa
     1321 lvmqfcklhd lelstsflre caksnewlqf liqtqlhghq paqvipllqd fpaavqdhll
     1381 lalgrllgae agaagrarag slfqtllqcq eqpspwgyll aeglrahspi lsvlaaccpd
     1441 anlvsclcvw ivtsvdgatr aeatahsqae spqwdlqdla viwkvllrkq ksktllngfq
     1501 lflkdspllh ilemyelcmn ckkyneaktk ldkfqesltn lgaaggaapa vplpwlrsqa
     1561 lfllelmlqq chtdyelgrl lqllaaaqsl lldgphltrl calsealrds sisisrsilt
     1621 scsleafqae cssileqlqe kgmfslarev aalaelpvds vvthevqctw
//
LOCUS       XP_041325115            1546 aa            linear   VRT 06-MAY-2021
DEFINITION  spatacsin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325115
VERSION     XP_041325115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1546
                     /product="spatacsin-like isoform X2"
                     /calculated_mol_wt=171198
     CDS             1..1546
                     /gene="LOC121354500"
                     /coded_by="XM_041469181.1:51..4691"
                     /db_xref="GeneID:121354500"
ORIGIN      
        1 maaagarpel rvllvprsgq prdaarvrls rarhalgtvl pagairlesl gpggagrarg
       61 svlpgawadf vwdsseddgs qssetkllal aqshdlfvye fsvedgkhnp sslhsceaet
      121 lkklleakni slpsissvki lsfgnnkfkl llnqsvlvhl tfpgedsppe tcgcfplalp
      181 pgavgriads qfcrgilfll dsagwiylfd ccdgatlgkv avalgaaqgp vsplaalavs
      241 pdlstavvts scqralavql ntyfrqfpeh llckrdpenl avkppeglde delassehsm
      301 ellsapfrtd rswkahlssl wdrvrgrrtp gspglvndln lpwyqflthl edhdpevced
      361 permvafvpr avtwaaspal qgqpgaagqq waqipvgaaq emvklecklv tgakavfvlq
      421 aqgtglslal wdfesqdvtc shfgrssayv ecsaelplcl llterglslv lfgvtqeefl
      481 trlmmfgsaa vvdslchlng wercsipiha leaglenrql dtvdlflksk esgfslsaac
      541 pgpehpggaa sqsylrnlee lrpalnllcs aiqdndmeph skpfseqlln ltltfltkql
      601 eeifvhteep deflqkaadi ltdyiirlrk flrryphpav tpghtgaeld edlpeieesq
      661 kwekltpeev iaeailsnki peaqiffrrq qhpaeslqef mqtglslvyd cllrgsprea
      721 sqllrnmgld vrqelhkicf htqdrhvrel lvkvlqeeny fsekekkiid fvhqverfys
      781 esfqekeetq plsrcsrwrr qqelagprav lgsqlgrgsp raprptvtls walcwdqllq
      841 emlllpwtpr qelrtcsaev lwmhltaqhd wlsicswiee sepsqapcdr aawpplrpdi
      901 vdrstlcspy mrqdiltkla rkgifvpsel edfelllqrl sclggvlqnp hpvpkystas
      961 gldfhaqfvl hclehslqyl lytyldyysl tpsncpvldd kelqeahpwf eflvqcrgva
     1021 snprdpkmvf qaslanaqml ipssqggvss illegrtlla lattvygpgg idqvlqnedt
     1081 ekplqkvdpq llkmaltpyp klkaalfpsc tahgilppdi slyhllqslm pfdptklfgw
     1141 qstntlavsv ekltkladge kaaaaallts leeafwdaie qqgikrtssd srrqwalvmq
     1201 fcklhdlels tsflrecaks newlqfliqt qlhghqpaqv ipllqdfpaa vqdhlllalg
     1261 rllgaeagaa graragslfq tllqcqeqps pwgyllaegl rahspilsvl aaccpdanlv
     1321 sclcvwivts vdgatraeat ahsqaespqw dlqdlaviwk vllrkqkskt llngfqlflk
     1381 dspllhilem yelcmnckky neaktkldkf qesltnlgaa ggaapavplp wlrsqalfll
     1441 elmlqqchtd yelgrllqll aaaqsllldg phltrlcals ealrdssisi srsiltscsl
     1501 eafqaecssi leqlqekgmf slarevaala elpvdsvvth evqctw
//
LOCUS       XP_041325116            1543 aa            linear   VRT 06-MAY-2021
DEFINITION  spatacsin-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325116
VERSION     XP_041325116.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469182.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1543
                     /product="spatacsin-like isoform X3"
                     /calculated_mol_wt=170858
     CDS             1..1543
                     /gene="LOC121354500"
                     /coded_by="XM_041469182.1:51..4682"
                     /db_xref="GeneID:121354500"
ORIGIN      
        1 maaagarpel rvllvprsgq prdaarvrls rarhalgtvl pagairlesl gpggagrarg
       61 svlpgawadf vwdsseddgs qssetkllal aqshdlfvye fsvedgkhnp sslhsceaet
      121 lkklleakni slpsissvki lsfgnnkfkl llnqsvlvhl tfpgedsppe tcgcfplalp
      181 pgavgriads qfcrgilfll dsagwiylfd ccdgatlgkv avalgaaqgp vsplaalavs
      241 pdlstavvts scqralavql ntyfrqfpeh llckrdpenl avkppeglde delassehsm
      301 ellsapfrtd rswkahlssl wdrvrgrrtp gspglvndln lpwyqflthl edhdpevced
      361 permvafvpr avtwaaspal qgqpgaagqq waqipvgaaq emvklecklv tgakavfvlq
      421 aqgtglslal wdfesqdvtc shfgrssayv ecsaelplcl llterglslv lfgvtqeefl
      481 trlmmfgsaa vvdslchlng wercsipiha leaglenrql dtvdlflksk esgfslsaac
      541 pgpehpggaa sqsylrnlee lrpalnllcs aiqdndmeph skpfseqlln ltltfltkql
      601 eeifvhteep deflqkaadi ltdyiirlrk flrryphpav tpghtgaeld edlpeieesq
      661 kwekltpeev iaeailsnki peaqiffrrq qhpaeslqef mqtglslvyd cllrgsprea
      721 sqllrnmgld vrqelhkicf htqdrhvrel lvkvlqeeny fsekekkiid fvhqverfys
      781 esfqekeetq plsrcsrwrr qqelagprav lgsqlgrgsp raprptvtls walcwdqllq
      841 emlllpwtpr qelrtcsaev lwmhltaqhd wlsicswiee sepsqapcdr aawpplrpdi
      901 vdrstlcspy mrqdiltkla rkgifvpsel edfelllqrl sclggvlqnp hpvpkystas
      961 gldfhaqfvl hclehslqyl lytyldyysl tpsncpvldd kelqeahpwf eflvqcrgva
     1021 snprdpkmvf qaslanaqml ipssqggvss illegrtlla lattvygpgg idqvlqnedt
     1081 ekplqkvdpq llkmaltpyp klkaalfpsc tahgilppdi slyhllqslm pfdptklfgw
     1141 qstntlavsd awselphfss pelvsrhavq erldfpfyll hgrpafafgt fvgqqlarsr
     1201 aprqlvqqaa reaqllalsc lgvpsvaaac vcflellghd slglrvdlga asllcshscs
     1261 rdasphglsr dslvekltkl adgekaaaaa lltsleeafw daieqqgikr tssdsrrqwa
     1321 lvmqfcklhd lelstsflre caksnewlqf liqtqlhghq paqvipllqd fpaavqdhll
     1381 lalgrllgae agaagrarag slfqtllqcq eqpspwgyll aeglrahspi lsvlaaccpd
     1441 anlvsclcvw ivtsvdgatr aeatahsqae spqwdlqdla viwkvllrkq ksktllngfq
     1501 lflkdspllh ilemyelcmn ckkyneaktk ldkfqesltn vpt
//
LOCUS       XP_041325117             310 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha/beta hydrolase domain-containing protein 17C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325117
VERSION     XP_041325117.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469183.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="alpha/beta hydrolase domain-containing protein
                     17C"
                     /calculated_mol_wt=34134
     Region          89..307
                     /region_name="FrsA"
                     /note="Fermentation-respiration switch esterase FrsA,
                     DUF1100 family [Signal transduction mechanisms]; COG1073"
                     /db_xref="CDD:440691"
     CDS             1..310
                     /gene="ABHD17C"
                     /coded_by="XM_041469183.1:748..1680"
                     /db_xref="GeneID:121354501"
ORIGIN      
        1 mpeqgprmng fslgelcwlf ccppcpsria aklaflppep tytvlqpeqq qepgaaagag
       61 tptgsgtcsl hlseradwqy sqreldavev ffsrtardnr lgcmfvrcap tgrytllfsh
      121 gnavdlgqmc sfyiglgsri ncnvfsydys gygvstgkps eknlyadida awqalrtryg
      181 vspeniilyg qsigtvptvd lasryecaav ilhsplmsgl rvafpdtrkt ycfdafpsid
      241 kiskvtspvl vihgtedevi dfshglamye rcpraveplw vegaghndie lyaqylerlk
      301 qfishelpns
//
LOCUS       XP_041325119             325 aa            linear   VRT 06-MAY-2021
DEFINITION  dual oxidase maturation factor 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325119
VERSION     XP_041325119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="dual oxidase maturation factor 1-like"
                     /calculated_mol_wt=35667
     Region          10..285
                     /region_name="DuoxA"
                     /note="Dual oxidase maturation factor; pfam10204"
                     /db_xref="CDD:462995"
     CDS             1..325
                     /gene="LOC121354502"
                     /coded_by="XM_041469185.1:1..978"
                     /db_xref="GeneID:121354502"
ORIGIN      
        1 mtlwngsypf ypganacfpf dttravivtv flsvlatfii ilpgipgrgr lfwflrlvlg
       61 lfmgavilnv qftrdwesgw vqantsyksf spvqvnadig lhiglagvnv tlrgnpvqqi
      121 netidynehf pwsfgadydh sysqglhkgl pspilyvaek fssqspcavh rqyriaghya
      181 savlwlafct wlisillfsm sillyggqml lltgtlilss lllfstarnt lqcpiqfspa
      241 alrtdygesf wlalatgllc lllglgiiil nsvqpeklkl ifslskssqe elwdksclpa
      301 qpscsaqggf mvplgelchg tatql
//
LOCUS       XP_041325120            1294 aa            linear   VRT 06-MAY-2021
DEFINITION  immunoglobulin superfamily DCC subclass member 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325120
VERSION     XP_041325120.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469186.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1294
                     /product="immunoglobulin superfamily DCC subclass member
                     4"
                     /calculated_mol_wt=141176
     Region          46..143
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          64..68
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          78..82
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          100..104
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          124..128
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          138..141
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          150..236
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          166..170
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          179..183
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          201..205
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          215..220
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          248..318
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          338..424
                     /region_name="I-set"
                     /note="Immunoglobulin I-set domain; pfam07679"
                     /db_xref="CDD:400151"
     Region          355..359
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          368..372
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          390..394
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          404..409
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          417..420
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <472..870
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          854..946
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(935..936,938..939)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1294
                     /gene="IGDCC4"
                     /coded_by="XM_041469186.1:1..3885"
                     /db_xref="GeneID:121354503"
ORIGIN      
        1 mrprrpllpa pggaymaled lllclcfsal avlavqgrls egdslelscs agpakvilep
       61 nqvvildcnl tpveqvinit wkkngfplve qehlhvlpng slfissqava kdskyperdg
      121 aegnyscvsh tslgtvtsqt aavrfstlsr ffqqpesqtv eengmarfec rieglpspvi
      181 twekdheavp aeprfitlpn gvlqivdvqe sdagiyhcva tnaarkrysn datlsvvkgs
      241 qpaggdvtiv aapenttvva gesvvmecma aadptpfvsw irqdgksist dvivlgrtnl
      301 lipssqphhs gvyvcrankp qtrqfvtaaa elrilatpsi sqapetisrt rastarfvck
      361 aegepaptih wlkngepils ngrvkvqssg slvinqigle dagyyqcvae nslgmacata
      421 klsvivregl psapkkvsav slssstvlvs werpehnseq iigfslhyqr avgtdnveyq
      481 favnndttel qvkdlepntn yvfyvvaysq lgasrtsssi vvqtledvps aapqlslssm
      541 tpgdirvtwl ppppelsngk itkykidyct lkeadqvtsi evggnetqit lyslhpnkvy
      601 kvriaastsv gygapsewtq hrtpdrdnqt hvpfaptelk vrakmeslli twqppanhaq
      661 isgyklyyre vgpeessdes pldgaedesw dvgpiklkkk vkqyeltrla pgklyevklv
      721 afnkhedgya avwkgkteka patavdppvq kgpplppvqv yaesnsstsi wlrwkkpdft
      781 tvkivnytvr fspwglknas lvtyytssde dilisglkpy tryefavqsn gvgidgpfgs
      841 vverftlpdr pstppsdlrl hplnpyavqv hwcppvepng iiveylilyn anntqpddmw
      901 tlltregnif stevhglesd tryffkmgak tvvgsgpysn vkdvhtlrek lsdvldihsv
      961 tgiivgvclg llcilfcmca sfrnskhrea lpgldsqaag nhtyyhrsrq glaspsatld
     1021 sheleslmsp lpedapvplg ditelaevhs lihtslpedi fhgkrksswn kstnqawtns
     1081 itrygdtitk eplsavngsl klpssagqkl llqalvydav mneakkshlp aslhqveaev
     1141 ivhsdfsasd reynsqlhtl eseetedqep eelpsaelal pssqqdtgqv lvdcmdnlea
     1201 qaqaellctd tktdkpeavc ihgltngfhr hgesldsees gdsdstqegr gdvqpvkcql
     1261 lspapeeall csnsgltsps sasenmahvh nhke
//
LOCUS       XP_041325121             318 aa            linear   VRT 06-MAY-2021
DEFINITION  retinaldehyde-binding protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325121
VERSION     XP_041325121.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469187.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="retinaldehyde-binding protein 1 isoform X1"
                     /calculated_mol_wt=36693
     Region          62..118
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          142..293
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..318
                     /gene="RLBP1"
                     /coded_by="XM_041469187.1:1..957"
                     /db_xref="GeneID:121354504"
ORIGIN      
        1 mlsspqtgtf rivseeeqal rsklerlttk dhgpvfgrce kipphtlqka kdelneteek
       61 revavkalre lvqeragged vcqkvaekvq erddsfllrf irarkfdvhr aydllkgyvn
      121 frqqypelfd nlspeavrst ieagypgila srdkygrvvm lfnienwdye eitfdeilra
      181 yciileklle neetqingfc iienfkgftm qqasgikpse lkkmvdmlqd sfparfkavh
      241 fihqpwyftt tynvvkpflk skllervfvh geelesfyqe idadilpadf ggnlpkydgk
      301 ataeklfgpr iesedtal
//
LOCUS       XP_041325122             316 aa            linear   VRT 06-MAY-2021
DEFINITION  retinaldehyde-binding protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325122
VERSION     XP_041325122.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469188.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="retinaldehyde-binding protein 1 isoform X2"
                     /calculated_mol_wt=36438
     Region          60..116
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          140..291
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..316
                     /gene="RLBP1"
                     /coded_by="XM_041469188.1:1..951"
                     /db_xref="GeneID:121354504"
ORIGIN      
        1 msavtgtfri vseeeqalrs klerlttkdh gpvfgrceki pphtlqkakd elneteekre
       61 vavkalrelv qeraggedvc qkvaekvqer ddsfllrfir arkfdvhray dllkgyvnfr
      121 qqypelfdnl speavrstie agypgilasr dkygrvvmlf nienwdyeei tfdeilrayc
      181 iilekllene etqingfcii enfkgftmqq asgikpselk kmvdmlqdsf parfkavhfi
      241 hqpwyfttty nvvkpflksk llervfvhge elesfyqeid adilpadfgg nlpkydgkat
      301 aeklfgprie sedtal
//
LOCUS       XP_041325123             320 aa            linear   VRT 06-MAY-2021
DEFINITION  dual oxidase maturation factor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325123
VERSION     XP_041325123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469189.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="dual oxidase maturation factor 2"
                     /calculated_mol_wt=35623
     Region          10..286
                     /region_name="DuoxA"
                     /note="Dual oxidase maturation factor; pfam10204"
                     /db_xref="CDD:462995"
     CDS             1..320
                     /gene="DUOXA2"
                     /coded_by="XM_041469189.1:1..963"
                     /db_xref="GeneID:121354505"
ORIGIN      
        1 mtlfdgvypf ypqqrkaavf dissiivivv fltlacsfll itpgirgrar lywtlrvlls
       61 lfvgvvivvv qftgdwesgw vrantsyksf spvqvnadig lhiglagvnv tlrgnpvqqi
      121 netidynehf pwsfgadydh sysqglhkgl pspilyvaek fssqspcavh rqyriaghya
      181 savlwaafct wvisnilfsm pvlvyggyml latgafmifs llsfstvrns pmcliqigtr
      241 tlhvayggsf wlmlatallc lvvgitivam hhlnldllkt ffdlredkae ehqempevfi
      301 nphfvsksls psepteiksi
//
LOCUS       XP_041325124             497 aa            linear   VRT 06-MAY-2021
DEFINITION  myocyte-specific enhancer factor 2A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325124
VERSION     XP_041325124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="myocyte-specific enhancer factor 2A isoform X1"
                     /calculated_mol_wt=53367
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..152
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..497
                     /gene="MEF2A"
                     /coded_by="XM_041469190.1:466..1959"
                     /db_xref="GeneID:121354506"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglpaqnf smsvtvpvsn pntltysnpg sslvspslaa sssltdttml
      181 sppqstlhrn vspgapqrpp sagnaggmlg ttdlsvpnga gtspvgngfv nsraspsllg
      241 tsgggnglgk vmptkspppp gggnlgmnnr kpdlrvvipp sskgmmppls eedelelntq
      301 risssqstqp latpvlsvtt pslppqglvy tatwdstpst dysltsadls alqgfnspgm
      361 lslgqvsawq qhhlrpaals slvtgsqlsq gsnlsintnq niniksepis pprdrvtpsg
      421 fppqqpqppq pppppsrqel grspvdslss ssssydgsdr edprsdfhsp vvlgrppnae
      481 drespsvkrm rmdtwvt
//
LOCUS       XP_041325125             495 aa            linear   VRT 06-MAY-2021
DEFINITION  myocyte-specific enhancer factor 2A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325125
VERSION     XP_041325125.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469191.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="myocyte-specific enhancer factor 2A isoform X2"
                     /calculated_mol_wt=52997
     Region          1..>235
                     /region_name="ARG80"
                     /note="Regulator of arginine metabolism and related MADS
                     box-containing transcription factors [Transcription];
                     COG5068"
                     /db_xref="CDD:227400"
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..495
                     /gene="MEF2A"
                     /coded_by="XM_041469191.1:469..1956"
                     /db_xref="GeneID:121354506"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivetlrk kglngcespd addyfehspl sedrfsklne
      121 dsdfifkrgp pglpaqnfsm svtvpvsnpn tltysnpgss lvspslaass sltdttmlsp
      181 pqstlhrnvs pgapqrppsa gnaggmlgtt dlsvpngagt spvgngfvns raspsllgts
      241 gggnglgkvm ptksppppgg gnlgmnnrkp dlrvvippss kgmmpplsee delelntqri
      301 sssqstqpla tpvlsvttps lppqglvyta twdstpstdy sltsadlsal qgfnspgmls
      361 lgqvsawqqh hlrpaalssl vtgsqlsqgs nlsintnqni niksepispp rdrvtpsgfp
      421 pqqpqppqpp pppsrqelgr spvdslssss ssydgsdred prsdfhspvv lgrppnaedr
      481 espsvkrmrm dtwvt
//
LOCUS       XP_041325126             489 aa            linear   VRT 06-MAY-2021
DEFINITION  myocyte-specific enhancer factor 2A isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325126
VERSION     XP_041325126.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469192.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..489
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..489
                     /product="myocyte-specific enhancer factor 2A isoform X3"
                     /calculated_mol_wt=52422
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          97..152
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..489
                     /gene="MEF2A"
                     /coded_by="XM_041469192.1:467..1936"
                     /db_xref="GeneID:121354506"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivealnk kehrgcdspd pdtsyvltph teekykkine
      121 efdnmmrnhk iapglpaqnf smsvtvpvsn pntltysnpg sslvspslaa sssltdttml
      181 sppqstlhrn vspgapqrpp sagnaggmlg ttdlsvpnga gtspvgngfv nsraspsllg
      241 tsgggnglgk vmptkspppp gggnlgmnnr kpdlrvvipp sskgmmppln tqrisssqst
      301 qplatpvlsv ttpslppqgl vytatwdstp stdysltsad lsalqgfnsp gmlslgqvsa
      361 wqqhhlrpaa lsslvtgsql sqgsnlsint nqniniksep ispprdrvtp sgfppqqpqp
      421 pqpppppsrq elgrspvdsl ssssssydgs dredprsdfh spvvlgrppn aedrespsvk
      481 rmrmdtwvt
//
LOCUS       XP_041325127             487 aa            linear   VRT 06-MAY-2021
DEFINITION  myocyte-specific enhancer factor 2A isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325127
VERSION     XP_041325127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..487
                     /product="myocyte-specific enhancer factor 2A isoform X4"
                     /calculated_mol_wt=52052
     Region          1..>235
                     /region_name="ARG80"
                     /note="Regulator of arginine metabolism and related MADS
                     box-containing transcription factors [Transcription];
                     COG5068"
                     /db_xref="CDD:227400"
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     CDS             1..487
                     /gene="MEF2A"
                     /coded_by="XM_041469193.1:472..1935"
                     /db_xref="GeneID:121354506"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivetlrk kglngcespd addyfehspl sedrfsklne
      121 dsdfifkrgp pglpaqnfsm svtvpvsnpn tltysnpgss lvspslaass sltdttmlsp
      181 pqstlhrnvs pgapqrppsa gnaggmlgtt dlsvpngagt spvgngfvns raspsllgts
      241 gggnglgkvm ptksppppgg gnlgmnnrkp dlrvvippss kgmmpplntq risssqstqp
      301 latpvlsvtt pslppqglvy tatwdstpst dysltsadls alqgfnspgm lslgqvsawq
      361 qhhlrpaals slvtgsqlsq gsnlsintnq niniksepis pprdrvtpsg fppqqpqppq
      421 pppppsrqel grspvdslss ssssydgsdr edprsdfhsp vvlgrppnae drespsvkrm
      481 rmdtwvt
//
LOCUS       XP_041325128             541 aa            linear   VRT 06-MAY-2021
DEFINITION  myocyte-specific enhancer factor 2A isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325128
VERSION     XP_041325128.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469194.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..541
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..541
                     /product="myocyte-specific enhancer factor 2A isoform X5"
                     /calculated_mol_wt=58411
     Region          2..78
                     /region_name="MADS_MEF2_like"
                     /note="MEF2 (myocyte enhancer factor 2)-like/Type II
                     subfamily of MADS (MCM1, Agamous, Deficiens, and SRF
                     (serum response factor) box family of eukaryotic
                     transcriptional regulators. Binds DNA and exists as hetero
                     and homo-dimers. Differs from SRF-like/Type I...; cd00265"
                     /db_xref="CDD:238165"
     Site            order(2..4,6,8,13,15,19..20,23..24,26..27,30..31,33..34,
                     38)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238165"
     Site            order(21,28..29,32..33,35..36,39,44,46,48,54,56,62,65..66,
                     69,72..73)
                     /site_type="other"
                     /note="dimerization interface [polypeptide binding]"
                     /db_xref="CDD:238165"
     Site            59
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:238165"
     Region          141..196
                     /region_name="HJURP_C"
                     /note="Holliday junction regulator protein family
                     C-terminal repeat; pfam12347"
                     /db_xref="CDD:463543"
     CDS             1..541
                     /gene="MEF2A"
                     /coded_by="XM_041469194.1:469..2094"
                     /db_xref="GeneID:121354506"
ORIGIN      
        1 mgrkkiqitr imdernrqvt ftkrkfglmk kayelsvlcd ceialiifns snklfqyast
       61 dmdkvllkyt eynephesrt nsdivetlrk kglngcespd addyfehspl sedrfsklne
      121 dsdfifkrgp alnkkehrgc dspdpdtsyv ltphteekyk kineefdnmm rnhkiapglp
      181 aqnfsmsvtv pvsnpntlty snpgsslvsp slaasssltd ttmlsppqst lhrnvspgap
      241 qrppsagnag gmlgttdlsv pngagtspvg ngfvnsrasp sllgtsgggn glgkvmptks
      301 ppppgggnlg mnnrkpdlrv vippsskgmm pplseedele lntqrisssq stqplatpvl
      361 svttpslppq glvytatwds tpstdyslts adlsalqgfn spgmlslgqv sawqqhhlrp
      421 aalsslvtgs qlsqgsnlsi ntnqniniks epispprdrv tpsgfppqqp qppqppppps
      481 rqelgrspvd slssssssyd gsdredprsd fhspvvlgrp pnaedresps vkrmrmdtwv
      541 t
//
LOCUS       XP_041325129             259 aa            linear   VRT 06-MAY-2021
DEFINITION  lysM and putative peptidoglycan-binding domain-containing protein 4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325129
VERSION     XP_041325129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469195.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="lysM and putative peptidoglycan-binding
                     domain-containing protein 4"
                     /calculated_mol_wt=28270
     Region          78..116
                     /region_name="LysM"
                     /note="Lysin motif; smart00257"
                     /db_xref="CDD:197609"
     CDS             1..259
                     /gene="LYSMD4"
                     /coded_by="XM_041469195.1:44..823"
                     /db_xref="GeneID:121354508"
ORIGIN      
        1 mrlhesrtrp fqapatvhsf pgrqvfvfpn grpdseeess eeeelnvmel rprgkeqqrg
       61 sararlgdvv llerelteed slnklalqyg ckvadikrvn nfireqdlya lksikipvrp
      121 hglltesaga lrpppagpaq pgltrveppe pdpgaggsag grrlseyfrg idqsiqdavq
      181 vevqlsaeyg geglerplpe agkrdagnga dcgiqwwnav fimlligivl pvfyiiyfkt
      241 qglvahssnm tnsnvstag
//
LOCUS       XP_041325130             135 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S17 [Pyrgilauda ruficollis].
ACCESSION   XP_041325130
VERSION     XP_041325130.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469196.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..135
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..135
                     /product="40S ribosomal protein S17"
                     /calculated_mol_wt=15407
     Region          1..122
                     /region_name="Ribosomal_S17e"
                     /note="Ribosomal S17; pfam00833"
                     /db_xref="CDD:425895"
     CDS             1..135
                     /gene="RPS17"
                     /coded_by="XM_041469196.1:141..548"
                     /db_xref="GeneID:121354509"
ORIGIN      
        1 mgrvrtktvk kaarviieky ytrlgndfht nkrvceeiai ipskklrnki agyvthlmkr
       61 iqrgpvrgis iklqeeerer rdnyvpevsa ldqeiievdp dtkemlklld fgslsnlqvt
      121 qptvgmnfkt prgal
//
LOCUS       XP_041325132             394 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein subunit beta-5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325132
VERSION     XP_041325132.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469198.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..394
                     /product="guanine nucleotide-binding protein subunit
                     beta-5"
                     /calculated_mol_wt=43307
     Region          97..394
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(103,121,125,131..132,139..140,163,167,173..174,
                     192..193,211,215,221..222,235,255,259,265..266,278..279,
                     297,301,307..308,319..320,340,345,351..352,364..365,383,
                     387,393..394)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          107..144
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          150..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          197..233
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          240..277
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          283..319
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          327..363
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          369..393
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..394
                     /gene="GNB5"
                     /coded_by="XM_041469198.1:34..1218"
                     /db_xref="GeneID:121354510"
ORIGIN      
        1 mdqtflaivf gpcdkcgkek plrpvsvrse qrsycslcve mmateglhen etlaslksea
       61 etlkgkleee raklhdvelh qvaervealg qfvmktrrtl kghgnkvlcm dwckdkrriv
      121 sssqdgkviv wdsfttnkeh avtmpctwvm acayapsgca iacggldnkc svypltfekn
      181 enmaakkksv amhtnylsac sftnsdmqil tasgdgtcal wdvesgqllq sfhghgadvl
      241 cldlapsetg ntfvsggcdk kamvwdmrsg qcvqsfethd sdinsvryyp sgdafasgsd
      301 datcrlydlr adrevaiysk esiifgassv dfslsgrllf agyndytinv wdvlkgsrvs
      361 ilfghenrvs tlrvspdgta fcsgswdhtl riwa
//
LOCUS       XP_041325133             163 aa            linear   VRT 06-MAY-2021
DEFINITION  probable ribosome biogenesis protein RLP24 [Pyrgilauda ruficollis].
ACCESSION   XP_041325133
VERSION     XP_041325133.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469199.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..163
                     /product="probable ribosome biogenesis protein RLP24"
                     /calculated_mol_wt=19532
     Region          2..64
                     /region_name="Ribosomal_L24e"
                     /note="Ribosomal protein L24e; pfam01246"
                     /db_xref="CDD:460131"
     CDS             1..163
                     /gene="RSL24D1"
                     /coded_by="XM_041469199.1:44..535"
                     /db_xref="GeneID:121354511"
ORIGIN      
        1 mriekcyfcs gpiypghgvm fvrndckifr fckskchrnf kkkrnprkmr wtkafrkaag
       61 keltvdnsfe fekrrnepvk yqrelwnktv damkrveeik qkrqarfimn rlkkskelqe
      121 aedikevkqn ihllraphag tpkqledkmv qklqedvpme eds
//
LOCUS       XP_041325134             318 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325134
VERSION     XP_041325134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469200.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X1"
                     /calculated_mol_wt=35838
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..317
                     /region_name="SOCS_ASB7"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB7-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system. The...; cd03726"
                     /db_xref="CDD:239696"
     Site            order(274..279,285,295,301,306)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239696"
     CDS             1..318
                     /gene="ASB7"
                     /coded_by="XM_041469200.1:303..1259"
                     /db_xref="GeneID:121354512"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm lesdyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca qmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtrqprnlqd lcrikirqci glqnlkllde
      301 lpiakvmkdy lkhkfddi
//
LOCUS       XP_041325135             318 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325135
VERSION     XP_041325135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469201.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X1"
                     /calculated_mol_wt=35838
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          273..317
                     /region_name="SOCS_ASB7"
                     /note="SOCS (suppressors of cytokine signaling) box of
                     ASB7-like proteins. ASB family members have a C-terminal
                     SOCS box and an N-terminal ankyrin-related sequence. The
                     general function of the SOCS box is the recruitment of the
                     ubiquitin-transferase system. The...; cd03726"
                     /db_xref="CDD:239696"
     Site            order(274..279,285,295,301,306)
                     /site_type="other"
                     /note="putative elongin B/C interaction [polypeptide
                     binding]"
                     /db_xref="CDD:239696"
     CDS             1..318
                     /gene="ASB7"
                     /coded_by="XM_041469201.1:315..1271"
                     /db_xref="GeneID:121354512"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm lesdyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca qmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtrqprnlqd lcrikirqci glqnlkllde
      301 lpiakvmkdy lkhkfddi
//
LOCUS       XP_041325136             294 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and SOCS box protein 7 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325136
VERSION     XP_041325136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469202.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="ankyrin repeat and SOCS box protein 7 isoform
                     X2"
                     /calculated_mol_wt=32692
     Region          16..251
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          46..77
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          81..114
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(82,86..87,90..92,94..95,99,102,114,116,118,122..123,
                     126..128,130..131,135,138,147,149,151,155..156,159..161,
                     163..164,168,171,180)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          116..147
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          149..180
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          213..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..294
                     /gene="ASB7"
                     /coded_by="XM_041469202.1:303..1187"
                     /db_xref="GeneID:121354512"
ORIGIN      
        1 mlhhhcrrnp elqeelqiqa avaagdvhtv rkmleqgysp ngrdangwtl lhfsaargke
       61 rcvrvflehg adptvkdlig gftalhyaam hgrariarlm lesdyrsdii naksndgwtp
      121 lhvaahygrd sfvrlllefk aevdplsdkg ttplqlaiir ersscvkill dhnanidiqn
      181 gfllryavik snhsycrmfl qrgadtnlgr ledgqtplhl salrddvlca qmlynygadt
      241 ntrnyegqtp lavsisisgs srpcldflqe vtsgkkfakk kplvdkviig lcsk
//
LOCUS       XP_041325137             320 aa            linear   VRT 06-MAY-2021
DEFINITION  forkhead box protein B1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325137
VERSION     XP_041325137.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469203.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="forkhead box protein B1"
                     /calculated_mol_wt=34688
     Region          1..110
                     /region_name="FH_FOXB2"
                     /note="Forkhead (FH) domain found in Forkhead box protein
                     B2 (FOXB2) and similar proteins; cd20043"
                     /db_xref="CDD:410817"
     Site            order(18,36..37,40,59..60,62..63,66,73,83..85,87)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:410817"
     CDS             1..320
                     /gene="FOXB1"
                     /coded_by="XM_041469203.1:169..1131"
                     /db_xref="GeneID:121354513"
ORIGIN      
        1 mprpgrntys dqkppysyis ltamaiqssp ekmlplseiy kfimdrfpyy rentqrwqns
       61 lrhnlsfndc fikiprrpdq pgkgsfwalh pscgdmfeng sflrrrkrfk vvksdhlaps
      121 kpadaaqylq qqaklrlsal aatgthlpqm stynlgvsqp ssfkhpfaie niiareykmp
      181 gglafstmqp mpaayplpnq lttvgssigt gwphmyssgm idtatpisma sseygaygvp
      241 ikplchggqt lpaipvpikp tpaavpalpa lpapiptils nsppslspts sqtatsqssp
      301 atpsetltsp apalhsvavh
//
LOCUS       XP_041325138             344 aa            linear   VRT 06-MAY-2021
DEFINITION  mortality factor 4-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325138
VERSION     XP_041325138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469204.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="mortality factor 4-like protein 1"
                     /calculated_mol_wt=39436
     Region          15..71
                     /region_name="CBD_MSL3_like"
                     /note="chromo barrel domain of human male-specific lethal
                     complex subunit 3, and similar proteins; cd18983"
                     /db_xref="CDD:350846"
     Site            order(21..22,26..29,44,46..49,53,55..58,60..62,65..66)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:350846"
     Site            order(26,46,49,53)
                     /site_type="other"
                     /note="putative methylated histone tail binding site
                     [chemical binding]"
                     /db_xref="CDD:350846"
     Site            order(43,45..50,52..56)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Site            order(43,46,50,52,56)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350846"
     Region          158..333
                     /region_name="MRG"
                     /note="pfam05712"
                     /db_xref="CDD:461721"
     CDS             1..344
                     /gene="MORF4L1"
                     /coded_by="XM_041469204.1:91..1125"
                     /db_xref="GeneID:121354517"
ORIGIN      
        1 mapkqdpkpk fqegervlcf hgpllyeakc vkvaikdkqv kyfihysgwn knwdewvpes
       61 rvlkyvdtnl qkqkelqkan qeqyaegkmr gaapgkktsg lqqknvevff rrdgahtvcc
      121 letpaistrk tkknkqktpg igegsstset pqpprkkrar vdptveseet fmnrvevkvk
      181 ipeelkpwlv ddwdlitrqk qlfylpakkn vdsiledyan ykksrgntdn keyavnevva
      241 gikeyfnvml gtqllykfer pqyaeiladh pdapmsqvyg aphllrlfvr igamlaytpl
      301 dekslallln ylhdflkyla knssalfsas dyevappeyh rkav
//
LOCUS       XP_041325139             339 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325139
VERSION     XP_041325139.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469205.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="annexin A2"
                     /calculated_mol_wt=38484
     Region          37..102
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          109..174
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          193..259
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          269..334
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..339
                     /gene="ANXA2"
                     /coded_by="XM_041469205.1:122..1141"
                     /db_xref="GeneID:121354518"
ORIGIN      
        1 mstvheilsk lslegdhslp psayatvkay snfdadrdaa aletaiktkg vdevtiinil
       61 tnrsneqrqd iafayqrrtk kelsaalksa lsghleavil gllktpaqyd aselkasmkg
      121 lgtdedtlie iicsrtnqel seinrvyrem yktelekdii sdtsgdfrkl mvalakgkrc
      181 edtsvidyel idqdardlyd agvkrkgtdv pkwinimter svphlqkvfd ryksyspydm
      241 lesikkevkg dlenaflnlv qciqnkqlyf adrlydsmkg kgtrdkvlir imvsrcevdm
      301 lkiksefkrk ygkslyyfiq qdtkgdyqra llnlcgged
//
LOCUS       XP_041325141             339 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325141
VERSION     XP_041325141.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469207.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="annexin A2"
                     /calculated_mol_wt=38484
     Region          37..102
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          109..174
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          193..259
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          269..334
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..339
                     /gene="ANXA2"
                     /coded_by="XM_041469207.1:162..1181"
                     /db_xref="GeneID:121354518"
ORIGIN      
        1 mstvheilsk lslegdhslp psayatvkay snfdadrdaa aletaiktkg vdevtiinil
       61 tnrsneqrqd iafayqrrtk kelsaalksa lsghleavil gllktpaqyd aselkasmkg
      121 lgtdedtlie iicsrtnqel seinrvyrem yktelekdii sdtsgdfrkl mvalakgkrc
      181 edtsvidyel idqdardlyd agvkrkgtdv pkwinimter svphlqkvfd ryksyspydm
      241 lesikkevkg dlenaflnlv qciqnkqlyf adrlydsmkg kgtrdkvlir imvsrcevdm
      301 lkiksefkrk ygkslyyfiq qdtkgdyqra llnlcgged
//
LOCUS       XP_041325142             339 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325142
VERSION     XP_041325142.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469208.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="annexin A2"
                     /calculated_mol_wt=38484
     Region          37..102
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          109..174
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          193..259
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          269..334
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..339
                     /gene="ANXA2"
                     /coded_by="XM_041469208.1:99..1118"
                     /db_xref="GeneID:121354518"
ORIGIN      
        1 mstvheilsk lslegdhslp psayatvkay snfdadrdaa aletaiktkg vdevtiinil
       61 tnrsneqrqd iafayqrrtk kelsaalksa lsghleavil gllktpaqyd aselkasmkg
      121 lgtdedtlie iicsrtnqel seinrvyrem yktelekdii sdtsgdfrkl mvalakgkrc
      181 edtsvidyel idqdardlyd agvkrkgtdv pkwinimter svphlqkvfd ryksyspydm
      241 lesikkevkg dlenaflnlv qciqnkqlyf adrlydsmkg kgtrdkvlir imvsrcevdm
      301 lkiksefkrk ygkslyyfiq qdtkgdyqra llnlcgged
//
LOCUS       XP_041325143             457 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatocyte nuclear factor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325143
VERSION     XP_041325143.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469209.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..457
                     /product="hepatocyte nuclear factor 6"
                     /calculated_mol_wt=50412
     Region          280..354
                     /region_name="CUT"
                     /note="CUT domain; pfam02376"
                     /db_xref="CDD:460543"
     Region          377..432
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Site            order(378..382,384,401,407,420,422..423,426..427,429..431)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(380,383,423,426..427,430)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..457
                     /gene="ONECUT1"
                     /coded_by="XM_041469209.1:21..1394"
                     /db_xref="GeneID:121354519"
ORIGIN      
        1 mnaqlameni gdlhgvshep vpaaadlmsg sphhrsavph rgshlpahpr smgmasildg
       61 gdyhhhhrpp ehaltgplhp tmtmacetpp gmsmsstytt ltplqplppi stvsdkfphh
      121 hhhhhhhhhp hqripgnvsg sftlmrderg lasmnnlytp yhkdvtgmgq slsplsgsgl
      181 gsihnsqqgl phyahpsatm paekmltpng feahhpamla rhgdqhltpt sagmvpingi
      241 phhphahlna qshgqilgsa reqnpsvtgs qvnsgsnsgq meeintkeva qrittelkry
      301 sipqaifaqr vlcrsqgtls dllrnpkpws klksgretfr rmwkwlqepe fqrmsalrla
      361 ackrkeqehg kdrgntpkkp rlvftdvqrr tlhaifkenk rpskelqiti sqqlglelst
      421 vsnffmnarr rsldkwqdeg ssnsgnssss sstctka
//
LOCUS       XP_041325144             371 aa            linear   VRT 06-MAY-2021
DEFINITION  gonadotropin-releasing hormone II receptor-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325144
VERSION     XP_041325144.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469210.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="gonadotropin-releasing hormone II receptor-like"
                     /calculated_mol_wt=41709
     Region          40..322
                     /region_name="7tmA_GnRHR_vertebrate"
                     /note="vertebrate gonadotropin-releasing hormone
                     receptors, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15383"
                     /db_xref="CDD:320505"
     Region          41..67
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320505"
     Region          73..100
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320505"
     Site            order(96,99..100,111..116,118..119,122,163,165..169,198,
                     201..203,205..207,209..210,268,271..272,274..275,278,
                     289..290,292..294,297,300..301)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320505"
     Region          111..141
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320505"
     Region          150..171
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320505"
     Region          198..227
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320505"
     Region          248..278
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320505"
     Region          290..315
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320505"
     CDS             1..371
                     /gene="LOC121354520"
                     /coded_by="XM_041469210.1:273..1388"
                     /db_xref="GeneID:121354520"
ORIGIN      
        1 mseeqlpasp hcptrredtn vsasaypqyw veprftqaak vrviitaiff llaagsnaav
       61 lgsllrkrrk shvqplilsl aladllvtvm vmpldaawnv tvqwyggdis ckilnflklf
      121 amyaaalvlv visldrhaai lhpfsrahrr ngmllraawa gsvllalpql flfhlntipg
      181 rnftqcvthg sfrahweetv ynmftfttly itplsvmiic yirilweisk qlkvnkgltr
      241 nqndhiskar mktlkmtivi vatfiicwtp yyllglwywf qpamiqkmpe yvnhsfflfg
      301 llhtctdpii yglytpsfre dvqlclrgie taitrqkrhk pisasekntk dgatnggvas
      361 ggsngttvst v
//
LOCUS       XP_041325145             775 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protein PAT1 homolog 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325145
VERSION     XP_041325145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469211.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..775
                     /product="LOW QUALITY PROTEIN: protein PAT1 homolog 2"
                     /calculated_mol_wt=87148
     Region          <277..>411
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <283..346
                     /region_name="Med25_SD1"
                     /note="Mediator complex subunit 25 synapsin 1; pfam11235"
                     /db_xref="CDD:463244"
     Region          <486..>631
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..775
                     /gene="PATL2"
                     /coded_by="XM_041469211.1:1..2328"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121354522"
ORIGIN      
        1 mlygrrmpgr rgrpikgaag alwprrgtrd dggwvngrrr rrqqhhhrgm aeggesviie
       61 dfllvedall leemaeedee ldlynemtfg ldrdsteedv pkllvvpeis pevakalvea
      121 tgraaeqlee laeeeggiel qmeqvnsqle eeveelgtee qeedqecfee pselgdpavm
      181 ravrskptle sqdsavldsg igtcweefgk edtlamdpma wgscpgsvpr hlmledkail
      241 qvlerpppst nmaldflgsp vqrgyggssr lkcsdlrlms pkpfsqcflq qaplisprsp
      301 cspqpfppac rpsalftpnq tagyapptpf qpgsptvgsp pqplgvhfrp msssldpavf
      361 fspsatgpln fstpshmtql hpqhqrilmq rqgrqvqsvs pkklwsrkvd pyaglmtske
      421 kdwvvkvemm qlqseniddd yyyqtyyhrl erkqaeeell grrnkppklv tpfiqkvety
      481 dsvvriagsl gqvtvstcys prraidavhh alveeeaagt hrlralhrie klflqlleve
      541 evqqkispge kqpqrqeqks qkvesiyqal kiracsseee aedeflqllc vrkgkklvar
      601 llphligeqr ekilltityh lpflmkkdml deslpllysp lnevvgevtf skliellqel
      661 thplpessel pltmalknqf gisllyslls hgerllssha plkpcrgdfe awtdtvylms
      721 qelsrlptas laeplflpsn lvllfcryld kqtvyhlatk msecsplpae admlc
//
LOCUS       XP_041325146             120 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-2-microglobulin [Pyrgilauda ruficollis].
ACCESSION   XP_041325146
VERSION     XP_041325146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469212.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..120
                     /product="beta-2-microglobulin"
                     /calculated_mol_wt=13310
     Region          26..117
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          42..46
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          57..61
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          87..91
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          98..103
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          113..116
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..120
                     /gene="B2M"
                     /coded_by="XM_041469212.1:86..448"
                     /db_xref="GeneID:121354523"
ORIGIN      
        1 maraalalgv lallallglg aaaeapkvev yarsraeegk entlhcfvtg fhppridikl
       61 lkngepipgv kygdlsfnek wqfqrlvyvp fvptrddvfs crvahstmpe prnylwepdf
//
LOCUS       XP_041325147             516 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: meiosis-specific nuclear structural protein 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325147
VERSION     XP_041325147.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469213.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..516
                     /product="LOW QUALITY PROTEIN: meiosis-specific nuclear
                     structural protein 1"
                     /calculated_mol_wt=62507
     Region          133..473
                     /region_name="TPH"
                     /note="Trichohyalin-plectin-homology domain; pfam13868"
                     /db_xref="CDD:464007"
     CDS             1..516
                     /gene="MNS1"
                     /coded_by="XM_041469213.1:1..1551"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121354524"
ORIGIN      
        1 mrsnivfqsp prgdvthpwp rpxsyecrgr vailanqrgr fpgsetvsws paaprvttat
       61 aggmaseere wgrraarlra elererrlde tlraaeenrk qralqlereq klaaelarqd
      121 lekmkdekir qqvranslel relerklksa ymnkeraaqi aekkaiynen mkwedevaqe
      181 mkeeydkylk eemsaelrrh qekktyhqel dkqveeqekk kqeayeeflr ekhmideivk
      241 kiyeedqmek qrkldkiret qtyieefike qaiwrkrkqe emeeenrkim efanmqrqre
      301 dgwmakvrdt eekkqrvqdm vaktmereeq rrkeqeqilq dlyleeqeam ernkemaeie
      361 krirqrldlr qayekqfalk aaaqeamree dralrqrila klaeddrieq lnaqkrrmkq
      421 lehkmameki ledrrkqcia ekereleere lekrrqerir aiieeerqkl lkehawkllg
      481 ylprgilkde ndinmlgedf rlayqqrrgn elsees
//
LOCUS       XP_041325148             394 aa            linear   VRT 06-MAY-2021
DEFINITION  testis-expressed protein 9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325148
VERSION     XP_041325148.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469214.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..394
                     /product="testis-expressed protein 9 isoform X1"
                     /calculated_mol_wt=44171
     Region          <194..>368
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..394
                     /gene="TEX9"
                     /coded_by="XM_041469214.1:51..1235"
                     /db_xref="GeneID:121354526"
ORIGIN      
        1 msavgaarrg gdlpgvqraa gspqalagpg alsgawlake eqykrlnael eakteklvrq
       61 aeelmksqqk mlsqpasvqs kspeddrqrd plcpeisslt hslakvenkk kfpsvptaqn
      121 rpysaskgkr ttssskirnv evqsadgvav ledcvgfslt ktiskveerl kkgvlpdcqd
      181 ddifprvgne mgaeaqirfl kaklrviqed lanivfecrk kddenqnlgt rlkdteeens
      241 rlqrtvslqq sqiekykmls qeankktegl qqevtaleke leslkraqkq aaatqsatev
      301 rlnraledve kykvelnklk qsnkdvanqe lktieelkte nkklqkqkge litgfkkqlk
      361 lidilkrqkm hieaakmlsf teeefmkale wgny
//
LOCUS       XP_041325149             281 aa            linear   VRT 06-MAY-2021
DEFINITION  testis-expressed protein 9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325149
VERSION     XP_041325149.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469215.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="testis-expressed protein 9 isoform X2"
                     /calculated_mol_wt=32281
     Region          <81..>255
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..281
                     /gene="TEX9"
                     /coded_by="XM_041469215.1:199..1044"
                     /db_xref="GeneID:121354526"
ORIGIN      
        1 mtdreihsvp kfhllhthlq sskirnvevq sadgvavled cvgfsltkti skveerlkkg
       61 vlpdcqdddi fprvgnemga eaqirflkak lrviqedlan ivfecrkkdd enqnlgtrlk
      121 dteeensrlq rtvslqqsqi ekykmlsqea nkkteglqqe vtalekeles lkraqkqaaa
      181 tqsatevrln raledvekyk velnklkqsn kdvanqelkt ieelktenkk lqkqkgelit
      241 gfkkqlklid ilkrqkmhie aakmlsftee efmkalewgn y
//
LOCUS       XP_041325150             913 aa            linear   VRT 06-MAY-2021
DEFINITION  OTU domain-containing protein 7A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325150
VERSION     XP_041325150.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469216.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..913
                     /product="OTU domain-containing protein 7A isoform X1"
                     /calculated_mol_wt=102411
     Region          4..46
                     /region_name="UBA_Cezanne_like"
                     /note="UBA-like domain found in OTU domain-containing
                     proteins OTU7A, OTU7B and similar proteins; cd14347"
                     /db_xref="CDD:270532"
     Region          153..359
                     /region_name="OTU_OTUD7A"
                     /note="OTU (ovarian tumor) domain of OTU domain-containing
                     protein 7A; cd22773"
                     /db_xref="CDD:438610"
     Site            order(188..189,233,252,259,287..290,312,315,320..322,326,
                     352,354)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438610"
     Region          875..898
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     CDS             1..913
                     /gene="OTUD7A"
                     /coded_by="XM_041469216.1:837..3578"
                     /db_xref="GeneID:121354527"
ORIGIN      
        1 mtldmdavls dfvrstgaep glardllegk nwdltaalnd yeqlrqvhta nlpqvfnegr
       61 fykqqepeqp pqvtkaerpc lqrqddiaqe krlsrgisha ssaivslars hvandcsneq
      121 fplempiytf qlpdlsvyse dfrsfierdl ieqatmvale qagrlnwwst vctsckrllp
      181 lattgdgncl lhaaslgmwg fhdrdlvlrk alytmmrsga erealkrrwr wqqtqqnkes
      241 glvyteeewe rewnellkla sseprthfsk nggtgggvdn aedpvyesle efhvfvlahi
      301 lrrpivvvad tmlrdsggea fapipfggiy lplevlpnrc hcsplvlayd qahfsalvsm
      361 eqkdqqreqa vipltdsehk llplhfavdp gkdwewgkdd ndntrlanli lsleaklnll
      421 hsymnvtwir ipsetrqapl aqpesptasa gedvqslads mdsdrdsics nsngnngkng
      481 kekekdkqrk dkdktrtdsv ankigslskt lgiklkknmg glgglvhgkm sransgngkn
      541 gdtvekvkek ksksrkgske esgqsastsp sekttpsptd rasssptekv ntkpfsdkqs
      601 dpwkystdvk lslnilraam qgerkfifag llltshrhqf heemigyylt saqerfnaeq
      661 eqkrkeaekk avlngsssrk leteafskek lepspqdras pvlpqshttq lvlkfkdrts
      721 ptpgsfssps ngakksgpip vsahyshtpp vqrqsvihlh dvnskpssfq ddtykpvvgt
      781 lktcatypqq nrslssqsys parlpgmrtv ntveslsyar paehksqtyt ngfntgdird
      841 cleyadedap qswlnnnknq grstvcpiys iqqnrckken csfygrpete nycsycykee
      901 lkrrerdskg hrh
//
LOCUS       XP_041325151             913 aa            linear   VRT 06-MAY-2021
DEFINITION  OTU domain-containing protein 7A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325151
VERSION     XP_041325151.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469217.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..913
                     /product="OTU domain-containing protein 7A isoform X1"
                     /calculated_mol_wt=102411
     Region          4..46
                     /region_name="UBA_Cezanne_like"
                     /note="UBA-like domain found in OTU domain-containing
                     proteins OTU7A, OTU7B and similar proteins; cd14347"
                     /db_xref="CDD:270532"
     Region          153..359
                     /region_name="OTU_OTUD7A"
                     /note="OTU (ovarian tumor) domain of OTU domain-containing
                     protein 7A; cd22773"
                     /db_xref="CDD:438610"
     Site            order(188..189,233,252,259,287..290,312,315,320..322,326,
                     352,354)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438610"
     Region          875..898
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     CDS             1..913
                     /gene="OTUD7A"
                     /coded_by="XM_041469217.1:917..3658"
                     /db_xref="GeneID:121354527"
ORIGIN      
        1 mtldmdavls dfvrstgaep glardllegk nwdltaalnd yeqlrqvhta nlpqvfnegr
       61 fykqqepeqp pqvtkaerpc lqrqddiaqe krlsrgisha ssaivslars hvandcsneq
      121 fplempiytf qlpdlsvyse dfrsfierdl ieqatmvale qagrlnwwst vctsckrllp
      181 lattgdgncl lhaaslgmwg fhdrdlvlrk alytmmrsga erealkrrwr wqqtqqnkes
      241 glvyteeewe rewnellkla sseprthfsk nggtgggvdn aedpvyesle efhvfvlahi
      301 lrrpivvvad tmlrdsggea fapipfggiy lplevlpnrc hcsplvlayd qahfsalvsm
      361 eqkdqqreqa vipltdsehk llplhfavdp gkdwewgkdd ndntrlanli lsleaklnll
      421 hsymnvtwir ipsetrqapl aqpesptasa gedvqslads mdsdrdsics nsngnngkng
      481 kekekdkqrk dkdktrtdsv ankigslskt lgiklkknmg glgglvhgkm sransgngkn
      541 gdtvekvkek ksksrkgske esgqsastsp sekttpsptd rasssptekv ntkpfsdkqs
      601 dpwkystdvk lslnilraam qgerkfifag llltshrhqf heemigyylt saqerfnaeq
      661 eqkrkeaekk avlngsssrk leteafskek lepspqdras pvlpqshttq lvlkfkdrts
      721 ptpgsfssps ngakksgpip vsahyshtpp vqrqsvihlh dvnskpssfq ddtykpvvgt
      781 lktcatypqq nrslssqsys parlpgmrtv ntveslsyar paehksqtyt ngfntgdird
      841 cleyadedap qswlnnnknq grstvcpiys iqqnrckken csfygrpete nycsycykee
      901 lkrrerdskg hrh
//
LOCUS       XP_041325153             913 aa            linear   VRT 06-MAY-2021
DEFINITION  OTU domain-containing protein 7A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325153
VERSION     XP_041325153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..913
                     /product="OTU domain-containing protein 7A isoform X1"
                     /calculated_mol_wt=102411
     Region          4..46
                     /region_name="UBA_Cezanne_like"
                     /note="UBA-like domain found in OTU domain-containing
                     proteins OTU7A, OTU7B and similar proteins; cd14347"
                     /db_xref="CDD:270532"
     Region          153..359
                     /region_name="OTU_OTUD7A"
                     /note="OTU (ovarian tumor) domain of OTU domain-containing
                     protein 7A; cd22773"
                     /db_xref="CDD:438610"
     Site            order(188..189,233,252,259,287..290,312,315,320..322,326,
                     352,354)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438610"
     Region          875..898
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     CDS             1..913
                     /gene="OTUD7A"
                     /coded_by="XM_041469219.1:726..3467"
                     /db_xref="GeneID:121354527"
ORIGIN      
        1 mtldmdavls dfvrstgaep glardllegk nwdltaalnd yeqlrqvhta nlpqvfnegr
       61 fykqqepeqp pqvtkaerpc lqrqddiaqe krlsrgisha ssaivslars hvandcsneq
      121 fplempiytf qlpdlsvyse dfrsfierdl ieqatmvale qagrlnwwst vctsckrllp
      181 lattgdgncl lhaaslgmwg fhdrdlvlrk alytmmrsga erealkrrwr wqqtqqnkes
      241 glvyteeewe rewnellkla sseprthfsk nggtgggvdn aedpvyesle efhvfvlahi
      301 lrrpivvvad tmlrdsggea fapipfggiy lplevlpnrc hcsplvlayd qahfsalvsm
      361 eqkdqqreqa vipltdsehk llplhfavdp gkdwewgkdd ndntrlanli lsleaklnll
      421 hsymnvtwir ipsetrqapl aqpesptasa gedvqslads mdsdrdsics nsngnngkng
      481 kekekdkqrk dkdktrtdsv ankigslskt lgiklkknmg glgglvhgkm sransgngkn
      541 gdtvekvkek ksksrkgske esgqsastsp sekttpsptd rasssptekv ntkpfsdkqs
      601 dpwkystdvk lslnilraam qgerkfifag llltshrhqf heemigyylt saqerfnaeq
      661 eqkrkeaekk avlngsssrk leteafskek lepspqdras pvlpqshttq lvlkfkdrts
      721 ptpgsfssps ngakksgpip vsahyshtpp vqrqsvihlh dvnskpssfq ddtykpvvgt
      781 lktcatypqq nrslssqsys parlpgmrtv ntveslsyar paehksqtyt ngfntgdird
      841 cleyadedap qswlnnnknq grstvcpiys iqqnrckken csfygrpete nycsycykee
      901 lkrrerdskg hrh
//
LOCUS       XP_041325154             912 aa            linear   VRT 06-MAY-2021
DEFINITION  OTU domain-containing protein 7A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325154
VERSION     XP_041325154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469220.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="OTU domain-containing protein 7A isoform X2"
                     /calculated_mol_wt=102283
     Region          4..46
                     /region_name="UBA_Cezanne_like"
                     /note="UBA-like domain found in OTU domain-containing
                     proteins OTU7A, OTU7B and similar proteins; cd14347"
                     /db_xref="CDD:270532"
     Region          153..359
                     /region_name="OTU_OTUD7A"
                     /note="OTU (ovarian tumor) domain of OTU domain-containing
                     protein 7A; cd22773"
                     /db_xref="CDD:438610"
     Site            order(188..189,233,252,259,287..290,312,315,320..322,326,
                     352,354)
                     /site_type="other"
                     /note="putative polypeptide substrate binding site
                     [polypeptide binding]"
                     /db_xref="CDD:438610"
     Region          874..897
                     /region_name="zf-A20"
                     /note="A20-like zinc finger; pfam01754"
                     /db_xref="CDD:460313"
     CDS             1..912
                     /gene="OTUD7A"
                     /coded_by="XM_041469220.1:837..3575"
                     /db_xref="GeneID:121354527"
ORIGIN      
        1 mtldmdavls dfvrstgaep glardllegk nwdltaalnd yeqlrqvhta nlpqvfnegr
       61 fykqqepeqp pqvtkaerpc lqrqddiaqe krlsrgisha ssaivslars hvandcsneq
      121 fplempiytf qlpdlsvyse dfrsfierdl ieqatmvale qagrlnwwst vctsckrllp
      181 lattgdgncl lhaaslgmwg fhdrdlvlrk alytmmrsga erealkrrwr wqqtqqnkes
      241 glvyteeewe rewnellkla sseprthfsk nggtgggvdn aedpvyesle efhvfvlahi
      301 lrrpivvvad tmlrdsggea fapipfggiy lplevlpnrc hcsplvlayd qahfsalvsm
      361 eqkdqqreqa vipltdsehk llplhfavdp gkdwewgkdd ndntrlanli lsleaklnll
      421 hsymnvtwir ipsetrapla qpesptasag edvqsladsm dsdrdsicsn sngnngkngk
      481 ekekdkqrkd kdktrtdsva nkigslsktl giklkknmgg lgglvhgkms ransgngkng
      541 dtvekvkekk sksrkgskee sgqsastsps ekttpsptdr asssptekvn tkpfsdkqsd
      601 pwkystdvkl slnilraamq gerkfifagl lltshrhqfh eemigyylts aqerfnaeqe
      661 qkrkeaekka vlngsssrkl eteafskekl epspqdrasp vlpqshttql vlkfkdrtsp
      721 tpgsfsspsn gakksgpipv sahyshtppv qrqsvihlhd vnskpssfqd dtykpvvgtl
      781 ktcatypqqn rslssqsysp arlpgmrtvn tveslsyarp aehksqtytn gfntgdirdc
      841 leyadedapq swlnnnknqg rstvcpiysi qqnrckkenc sfygrpeten ycsycykeel
      901 krrerdskgh rh
//
LOCUS       XP_041325155             546 aa            linear   VRT 06-MAY-2021
DEFINITION  perilipin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325155
VERSION     XP_041325155.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469221.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..546
                     /product="perilipin-1 isoform X1"
                     /calculated_mol_wt=59195
     Region          16..>291
                     /region_name="Perilipin"
                     /note="Perilipin family; pfam03036"
                     /db_xref="CDD:460784"
     CDS             1..546
                     /gene="PLIN1"
                     /coded_by="XM_041469221.1:102..1742"
                     /db_xref="GeneID:121354528"
ORIGIN      
        1 mtvkktqalq dgsakenvlq rvlqlpvvss tcqtlqrkys stkeshplma svcevyergv
       61 qgagalamwg mepvvrrlep qfavannlac rgldhleeki palqypvdkl aselkdtisc
      121 piqsakstig ssmdkiiela aegyeatkst vettakytrk nsvtqmaaag vdtalgglek
      181 lmeyllpeed eeadkkpkkk rlstpkvsqq qpsttttpsa asatrapsap raysttstps
      241 tpsapsapsa pstlgrigal vstvshrayq qttqslqrak tkgqelaswi pilgslakps
      301 apaapaacsd gqgsagwltr rhskapeqkq ekagkkdtnh tkagqdpglv gsvahnlqta
      361 casgissvkk vpavawdaae glilftprrl srametvdal ggtlvsapkh llgtlysyvp
      421 lrrqsvkeee asggtktnpe kkekkeeeee tktaapstee ksqlrsdwrl yrghhplsfl
      481 gledplflrh syyrspafdp dypfprksaf spynrrvseg syrfspesmy srayygnlyt
      541 pvfkkd
//
LOCUS       XP_041325156             455 aa            linear   VRT 06-MAY-2021
DEFINITION  perilipin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325156
VERSION     XP_041325156.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469222.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="perilipin-1 isoform X2"
                     /calculated_mol_wt=48115
     Region          16..>291
                     /region_name="Perilipin"
                     /note="Perilipin family; pfam03036"
                     /db_xref="CDD:460784"
     CDS             1..455
                     /gene="PLIN1"
                     /coded_by="XM_041469222.1:714..2081"
                     /db_xref="GeneID:121354528"
ORIGIN      
        1 mtvkktqalq dgsakenvlq rvlqlpvvss tcqtlqrkys stkeshplma svcevyergv
       61 qgagalamwg mepvvrrlep qfavannlac rgldhleeki palqypvdkl aselkdtisc
      121 piqsakstig ssmdkiiela aegyeatkst vettakytrk nsvtqmaaag vdtalgglek
      181 lmeyllpeed eeadkkpkkk rlstpkvsqq qpsttttpsa asatrapsap raysttstps
      241 tpsapsapsa pstlgrigal vstvshrayq qttqslqrak tkgqelaswi pilgslakps
      301 apaapaacsd gqgsagwltr rhskapeqkq ekagkkdtnh tkagqdpglv gsvahnlqta
      361 casgissvkk vpavawdaae glilftprrl srametvdal ggtlvsapkh llgtlysyvp
      421 avgegrrsir rhqdqpgeer eegggggdqd ccplh
//
LOCUS       XP_041325157             829 aa            linear   VRT 06-MAY-2021
DEFINITION  proprotein convertase subtilisin/kexin type 6 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325157
VERSION     XP_041325157.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469223.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..829
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..829
                     /product="proprotein convertase subtilisin/kexin type 6
                     isoform X1"
                     /calculated_mol_wt=91057
     Region          <11..26
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          37..331
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(39,91,137)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(82..83,120,123,165,183,193,224,235,297)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(82,123,297)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(230,260)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(238,240,243,245)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          416..506
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          558..673
                     /region_name="GF_recep_IV"
                     /note="Growth factor receptor domain IV; pfam14843"
                     /db_xref="CDD:464344"
     Region          616..>814
                     /region_name="VSP"
                     /note="Giardia variant-specific surface protein;
                     pfam03302"
                     /db_xref="CDD:146106"
     Region          659..701
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     CDS             1..829
                     /gene="PCSK6"
                     /coded_by="XM_041469223.1:1..2490"
                     /db_xref="GeneID:121354529"
ORIGIN      
        1 mggadpglcl qvdwlqqqev krrvkrqvrg ephalpfndp vwpnmwylhc gdknsrcrse
       61 mnilaawqrg ytgknvvvti lddgiernhp dllqnydpla sydvngndhd ptprydasne
      121 nkhgtrcage vaaaannsyc ivgiaynari ggirmldgdv tdvveakslg irpdyidiys
      181 aswgpdddgk tvdgpgllak qafeqgikkg rrglgsifvw asgnggregd ycscdgytns
      241 iytisisstt engykpwyle ecastlatty ssgafyerki vttdlrhrct dghtgtsvsa
      301 pmvagiiala leanplltwr dvqhllvkts rpghlrapdw ktngaghkvs hlygfglvda
      361 daivveakkw rmvppqhvcv gsldrvpkyi raehvlrast lssacaeqrd qhvlylehvv
      421 vrlsiahprr gdlqislisp agtrsqllar rvfdhsnegf kgwefmtvhc wgeraagewt
      481 leihdtpsqv rnpavqgklk ewslifygtg ehpytalsgp qsrgrslevp tsemepsraa
      541 flqsqvevae eeeeyagpch pecgdqgcdg pnadqclnci hyslgsmktg rmcvsscpag
      601 ffgdngarrc rrchkgcerc vgrgasqcta ckrnlyhhpe mgtclllcpp gfyaeerqkr
      661 clkchqsckk cvgeadkcta ckegfslage scvpecqpam ylsreprrce tcpastgpge
      721 edctpctpea paphwrcvpt cregfypads lglpnkvckr cddhcsaceg ssgnclrcke
      781 gysllggscv tnetctnadk tfcemvksnk lcekklfvqf ccqtclmag
//
LOCUS       XP_041325158             822 aa            linear   VRT 06-MAY-2021
DEFINITION  proprotein convertase subtilisin/kexin type 6 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325158
VERSION     XP_041325158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469224.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..822
                     /product="proprotein convertase subtilisin/kexin type 6
                     isoform X2"
                     /calculated_mol_wt=90486
     Region          <1..19
                     /region_name="S8_pro-domain"
                     /note="Peptidase S8 pro-domain; pfam16470"
                     /db_xref="CDD:465126"
     Region          30..324
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(32,84,130)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(75..76,113,116,158,176,186,217,228,290)
                     /site_type="active"
                     /db_xref="CDD:173789"
     Site            order(75,116,290)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173789"
     Site            order(223,253)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(231,233,236,238)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          409..499
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          551..666
                     /region_name="GF_recep_IV"
                     /note="Growth factor receptor domain IV; pfam14843"
                     /db_xref="CDD:464344"
     Region          609..>807
                     /region_name="VSP"
                     /note="Giardia variant-specific surface protein;
                     pfam03302"
                     /db_xref="CDD:146106"
     Region          652..694
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     CDS             1..822
                     /gene="PCSK6"
                     /coded_by="XM_041469224.1:254..2722"
                     /db_xref="GeneID:121354529"
ORIGIN      
        1 mdpkvdwlqq qevkrrvkrq vrgephalpf ndpvwpnmwy lhcgdknsrc rsemnilaaw
       61 qrgytgknvv vtilddgier nhpdllqnyd plasydvngn dhdptpryda snenkhgtrc
      121 agevaaaann sycivgiayn ariggirmld gdvtdvveak slgirpdyid iysaswgpdd
      181 dgktvdgpgl lakqafeqgi kkgrrglgsi fvwasgnggr egdycscdgy tnsiytisis
      241 sttengykpw yleecastla ttyssgafye rkivttdlrh rctdghtgts vsapmvagii
      301 alaleanpll twrdvqhllv ktsrpghlra pdwktngagh kvshlygfgl vdadaivvea
      361 kkwrmvppqh vcvgsldrvp kyiraehvlr astlssacae qrdqhvlyle hvvvrlsiah
      421 prrgdlqisl ispagtrsql larrvfdhsn egfkgwefmt vhcwgeraag ewtleihdtp
      481 sqvrnpavqg klkewslify gtgehpytal sgpqsrgrsl evptsemeps raaflqsqve
      541 vaeeeeeyag pchpecgdqg cdgpnadqcl ncihyslgsm ktgrmcvssc pagffgdnga
      601 rrcrrchkgc ercvgrgasq ctackrnlyh hpemgtclll cppgfyaeer qkrclkchqs
      661 ckkcvgeadk ctackegfsl agescvpecq pamylsrepr rcetcpastg pgeedctpct
      721 peapaphwrc vptcregfyp adslglpnkv ckrcddhcsa cegssgnclr ckegysllgg
      781 scvtnetctn adktfcemvk snklcekklf vqfccqtclm ag
//
LOCUS       XP_041325159             690 aa            linear   VRT 06-MAY-2021
DEFINITION  proprotein convertase subtilisin/kexin type 6 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325159
VERSION     XP_041325159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..690
                     /product="proprotein convertase subtilisin/kexin type 6
                     isoform X3"
                     /calculated_mol_wt=75631
     Region          <68..192
                     /region_name="Peptidases_S8_Protein_convertases_Kexins_Fur
                     in-lik"
                     /note="Peptidase S8 family domain in Protein convertases;
                     cd04059"
                     /db_xref="CDD:173789"
     Site            order(91,121)
                     /site_type="other"
                     /note="calcium binding site 2 [ion binding]"
                     /db_xref="CDD:173789"
     Site            order(99,101,104,106)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:173789"
     Region          277..367
                     /region_name="P_proprotein"
                     /note="Proprotein convertase P-domain; pfam01483"
                     /db_xref="CDD:460225"
     Region          419..534
                     /region_name="GF_recep_IV"
                     /note="Growth factor receptor domain IV; pfam14843"
                     /db_xref="CDD:464344"
     Region          492..657
                     /region_name="TNFRSF"
                     /note="Tumor necrosis factor receptor superfamily
                     (TNFRSF); cl22855"
                     /db_xref="CDD:473981"
     Region          520..562
                     /region_name="FU"
                     /note="Furin-like repeats; smart00261"
                     /db_xref="CDD:214589"
     Region          542..600
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276900"
     Region          663..686
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..690
                     /gene="PCSK6"
                     /coded_by="XM_041469225.1:209..2281"
                     /db_xref="GeneID:121354529"
ORIGIN      
        1 mtalrgttpt scrtmtrlqa tmlmgmtmtq lhatmpamrt stalaargrw rrrrttptas
       61 waspttpase grrglgsifv wasgnggreg dycscdgytn siytisisst tengykpwyl
      121 eecastlatt yssgafyerk ivttdlrhrc tdghtgtsvs apmvagiial aleanplltw
      181 rdvqhllvkt srpghlrapd wktngaghkv shlygfglvd adaivveakk wrmvppqhvc
      241 vgsldrvpky iraehvlras tlssacaeqr dqhvlylehv vvrlsiahpr rgdlqislis
      301 pagtrsqlla rrvfdhsneg fkgwefmtvh cwgeraagew tleihdtpsq vrnpavqgkl
      361 kewslifygt gehpytalsg pqsrgrslev ptsemepsra aflqsqveva eeeeeyagpc
      421 hpecgdqgcd gpnadqclnc ihyslgsmkt grmcvsscpa gffgdngarr crrchkgcer
      481 cvgrgasqct ackrnlyhhp emgtclllcp pgfyaeerqk rclkchqsck kcvgeadkct
      541 ackegfslag escvpecqpa mylsreprrc etcpastgpg eedctpctpe apaphwrcvp
      601 tcregfypad slglpnkvck rcddhcsace gssgnclrck egysllggsc vtnetctnad
      661 ktfcemvksn klcekklfvq fccqtclmag
//
LOCUS       XP_041325160             310 aa            linear   VRT 06-MAY-2021
DEFINITION  maspardin [Pyrgilauda ruficollis].
ACCESSION   XP_041325160
VERSION     XP_041325160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469226.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="maspardin"
                     /calculated_mol_wt=35183
     Region          45..266
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..310
                     /gene="SPG21"
                     /coded_by="XM_041469226.1:149..1081"
                     /db_xref="GeneID:121354530"
ORIGIN      
        1 mgeikvspdy nwfrstvplk kiivddddsk vwslydagpr sircpliflp pvsgtadvff
       61 qqilaltgwg yrvialqypv ywdhlefcdg frklldhlql dkvhlfgasl ggflaqkfae
      121 ythksprvqs lilcnafsdt sifnqtwtan sfwlmpafml kkivlgnfas gpldpemadg
      181 idfmvdrles lgqselasrl tlncqnsyve phkirdipvt imdvfdqsal steakeemyk
      241 lypnarrahl ktggnfpylc rsaevnlyiq ihllqfhgtr yaaidpsmvs aeelevqkis
      301 lhtsneqeeq
//
LOCUS       XP_041325161             310 aa            linear   VRT 06-MAY-2021
DEFINITION  maspardin [Pyrgilauda ruficollis].
ACCESSION   XP_041325161
VERSION     XP_041325161.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469227.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="maspardin"
                     /calculated_mol_wt=35183
     Region          45..266
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..310
                     /gene="SPG21"
                     /coded_by="XM_041469227.1:51..983"
                     /db_xref="GeneID:121354530"
ORIGIN      
        1 mgeikvspdy nwfrstvplk kiivddddsk vwslydagpr sircpliflp pvsgtadvff
       61 qqilaltgwg yrvialqypv ywdhlefcdg frklldhlql dkvhlfgasl ggflaqkfae
      121 ythksprvqs lilcnafsdt sifnqtwtan sfwlmpafml kkivlgnfas gpldpemadg
      181 idfmvdrles lgqselasrl tlncqnsyve phkirdipvt imdvfdqsal steakeemyk
      241 lypnarrahl ktggnfpylc rsaevnlyiq ihllqfhgtr yaaidpsmvs aeelevqkis
      301 lhtsneqeeq
//
LOCUS       XP_041325162             508 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and death domain-containing protein 1A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325162
VERSION     XP_041325162.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469228.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="ankyrin repeat and death domain-containing
                     protein 1A"
                     /calculated_mol_wt=56602
     Site            order(8,10,20..21,24..26,28..29,33,36,45,47,49,53..54,
                     57..59,61..62,66,69,78,80,82,86..87,90..92,94..95,99,102,
                     111)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          8..45
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          19..108
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          47..78
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          80..111
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          96..381
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(148,150,154..155,158..160,162..163,167,170,179,181,
                     183,187..188,191..193,195..196,200,203,212,214,216,
                     220..221,224..226,228..229,233,236)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          148..179
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          181..212
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          214..244
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          247..278
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          280..311
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          313..344
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          421..495
                     /region_name="Death"
                     /note="Death domain; pfam00531"
                     /db_xref="CDD:459845"
     CDS             1..508
                     /gene="ANKDD1A"
                     /coded_by="XM_041469228.1:16..1542"
                     /db_xref="GeneID:121354532"
ORIGIN      
        1 mgddlasegd tllqsekefh daakrndtar meelirrgvd ikaknnadrt alhwaagags
       61 vdavrllldh dvpvddedsf gmnalllsaw fghlrvlqil vnagakinca nrngrnllhc
      121 aaqrghiqvm efimedledm cvdetdkmdr tafhlaaehg qlevvefllr lgcshgakdk
      181 eentalhlaa knghlsvlek iidvgvdlde knsegltalh laaegghshc vkllleagad
      241 vnaqtqkkmn clhyaalhgy eeiarilmda gihtdalnhq nasamhiavl qnfpamvklf
      301 isaecdldip dnrqqtslhi aaehgrqdia emiliagvnl kltdkqgkts ldvaargnhi
      361 ilvdmiikad rfykwekdnl nsdssawvak dltfkqdhrl etqhirsvmw rlatkylkpg
      421 ewkklahywk ftddhiraie qqwtgtksyr ehghrmlliw lhgvitagen pikglyeglv
      481 gigrrdlaes irkkanadst sprkctam
//
LOCUS       XP_041325163             794 aa            linear   VRT 06-MAY-2021
DEFINITION  threonine--tRNA ligase 1, cytoplasmic-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325163
VERSION     XP_041325163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469229.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..794
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..794
                     /product="threonine--tRNA ligase 1, cytoplasmic-like"
                     /calculated_mol_wt=90684
     Region          122..781
                     /region_name="PLN02908"
                     /note="threonyl-tRNA synthetase"
                     /db_xref="CDD:178496"
     CDS             1..794
                     /gene="LOC121354533"
                     /coded_by="XM_041469229.1:10..2394"
                     /db_xref="GeneID:121354533"
ORIGIN      
        1 mavaagaaea aelrlarqer elrwlaaevg rlkepqelhc pgsaspelqr lraeneklry
       61 rllhlrrsla aelgraapaq ppaggekvss assadavnqi keekkkedea vnqhhndlqc
      121 vpgfiedrlk lyealkkehd allayraanq sksikitltd getvegeswk ttpyqlavgi
      181 sqvlasnavi akvngelwdl drplegdctl elltfdneea kavywhssah ilgeameghf
      241 ggclcygppv engfyydmyi edrsvsstef pllenrckni ikekqaferl evkkeilldm
      301 fkynkfkcri lnekvktptt tvyrcgplid lckgphvrht gkikalkiik ssstywegks
      361 dmetlqriyg isfpdnkmmk ewekvqeeak nrdhrkigke qelfffhdls pgscfflprg
      421 aflyntlvdf irgeyrrrnf tevvspnvfn sklweasghw qhysenmfaf eieketfalk
      481 pmncpghclm fahrprswre lplrladfgv lhrnelsgtl sgltrvrrfq qddahifcam
      541 eqieeeikdc ldflksvyav fgftfqlhls trpenylgdl eiwdhaekql qnslnnfgeq
      601 wslnpgdgaf ygpkidikik daigryhqca tiqldfqlpi rfnltyvgkd gddkkrpvii
      661 hrailgsver miailaenyg gkwpfwlspr qvmvvpvgpt seqyaqqvcn qffeagfmsd
      721 vdldqsctln kkirnaqlaq ynfilvvgek ekannavnvr trdnkvhgei svsstieklk
      781 kfktsqiana eeef
//
LOCUS       XP_041325164             686 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 49 [Pyrgilauda ruficollis].
ACCESSION   XP_041325164
VERSION     XP_041325164.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469230.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..686
                     /product="leucine-rich repeat-containing protein 49"
                     /calculated_mol_wt=78400
     Region          97..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..138
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          120..316
                     /region_name="PPP1R42"
                     /note="protein phosphatase 1 regulatory subunit 42;
                     cl42388"
                     /db_xref="CDD:455733"
     Region          139..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..204
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          205..226
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          227..248
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          249..273
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..686
                     /gene="LRRC49"
                     /coded_by="XM_041469230.1:174..2234"
                     /db_xref="GeneID:121354534"
ORIGIN      
        1 mvpskgrpgr gpraapaavn ncglqlviqt ssipektkpf efrinkdqss fhnrllqhdl
       61 eknysgrqdn tnfgssssit fpvlqrtaee kilnsdrltl erqkltvcpi idgedhlrll
      121 nfqhnfitri qnisnlhhlv fldlydnqie eisgvstlrs lrvlllgknr ikkisnlenl
      181 knldvldlhg nqiakienig hlselrvlnl arnlltvven lngldsltel nlrhnqvsai
      241 kdvdtlpclq rlflsfnnis sfedilclad ssslsditld gnpiaqetwy khtvlhhmmq
      301 lrqldmkrit eeerrmasia arkeeerkre shrqtllkek krltigniar qweiqqnqia
      361 leaslnkdke nepcqingsa pyvfpeesrs ldtilssavq glsvleshlv evegdtlgly
      421 gagalecldr nwsvqtagii atvsfmfief deivqvlakl rtkfpncvhl kfketnlval
      481 hqfnalaemh rmeqltvdpq gnpvvnlalw kyyvlfrlnh fnlqkingvk vtendivkae
      541 rlfgilayva sselphyrml sllgesrrkq fhyllegkgk ksgvgsdess dnrrsggest
      601 aratlnymtk dfhmekleei kerktfcqty venlvkeatd inmkneslqk lwpqmfielv
      661 rdavieirnk nsytklclqr iteqkq
//
LOCUS       XP_041325165             535 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-hexosaminidase subunit alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041325165
VERSION     XP_041325165.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469231.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..535
                     /product="beta-hexosaminidase subunit alpha"
                     /calculated_mol_wt=59930
     Region          33..152
                     /region_name="Glycohydro_20b2"
                     /note="beta-acetyl hexosaminidase like; pfam14845"
                     /db_xref="CDD:434261"
     Region          174..517
                     /region_name="GH20_HexA_HexB-like"
                     /note="Beta-N-acetylhexosaminidases catalyze the removal
                     of beta-1,4-linked N-acetyl-D-hexosamine residues from the
                     non-reducing ends of N-acetyl-beta-D-hexosaminides
                     including N-acetylglucosides and N-acetylgalactosides. The
                     hexA and hexB genes encode the...; cd06562"
                     /db_xref="CDD:119332"
     Site            order(185,214,269,329..330,380,399,427,429,466,468)
                     /site_type="active"
                     /db_xref="CDD:119332"
     CDS             1..535
                     /gene="HEXA"
                     /coded_by="XM_041469231.1:28..1635"
                     /db_xref="GeneID:121354535"
ORIGIN      
        1 maaaralqls llrlllllpp lllallpgpa gavwpqpqaq rfppggsrcp vparrfrfav
       61 adgsavgpgc avldaafqry wpllfgrpte nepswetpca ellvyvstpg cdgfpnldsn
      121 esyklsvskg smllsaetiw galrgletfs qlvrrdengt yyineteivd fprfphrgll
      181 ldtsrhylpl railetldvm aynkfnvfhw hivddpsfpy esstfpelsk qgafnamthv
      241 ytasdvrtvi dyarlrgirv iaefdtpght lswgpgapgl ltpcyvgkap sgaygpinpi
      301 vnstyqfvts lfqevstvfp dfflhlggde vdftcwksnp eirafmikmg lgedykkles
      361 fyiqrlldiv sslgkgyivw qevfdnnvkl rpdtiihvwk ensmqylnem anvtrsgyra
      421 llsapwylnr isygqdwiea ykveplnfeg speqkalvig geacmwgeyv dvtnltprlw
      481 prggavaerl wsnetvsnve dayvrlaefr ctllgrgvqa qplyvgyceh efgev
//
LOCUS       XP_041325166             429 aa            linear   VRT 06-MAY-2021
DEFINITION  D-glucuronyl C5-epimerase [Pyrgilauda ruficollis].
ACCESSION   XP_041325166
VERSION     XP_041325166.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469232.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..429
                     /product="D-glucuronyl C5-epimerase"
                     /calculated_mol_wt=47845
     Region          228..419
                     /region_name="C5-epim_C"
                     /note="D-glucuronyl C5-epimerase C-terminus; pfam06662"
                     /db_xref="CDD:461978"
     CDS             1..429
                     /gene="GLCE"
                     /coded_by="XM_041469232.1:16..1305"
                     /db_xref="GeneID:121354536"
ORIGIN      
        1 megvplstqw gpqgyfypiq iaqyglshys knltekpphv evyetagdgn ngnngnngng
       61 ewtvpkgcsl ttvwdksrlt gvkqfscpes segvslelnn grdfiisfdl kllsngsvsv
      121 vletternql ftvhyvsstq lialrdrdif ygigargsws tltrdlltdl rkgvglsntk
      181 avkqtkimpk rvlrlvakgr gfldnvtisa tahmaaffaa srwllrnqde rggwpimvtr
      241 klgegfksld pgwysamaqg qamstlvray qltkepaflg aalratapfk lpaeqrgvka
      301 vfmnrhdwye eypttpssfv lngfmyslig lydlketage klgkearlly ergmeslkam
      361 lplfdtgsgt iydlrhfmlg tapnlarwdy htthinqlql lgsiddapvf kefvkrwksy
      421 lrggrakhn
//
LOCUS       XP_041325167            2205 aa            linear   VRT 06-MAY-2021
DEFINITION  protein unc-13 homolog C [Pyrgilauda ruficollis].
ACCESSION   XP_041325167
VERSION     XP_041325167.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469233.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2205
                     /product="protein unc-13 homolog C"
                     /calculated_mol_wt=250489
     Region          1072..1153
                     /region_name="C1_Munc13-2-like"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in Munc13-2, Munc13-3 and similar proteins; cd20859"
                     /db_xref="CDD:410409"
     Site            order(1096..1102,1110..1114,1117)
                     /site_type="other"
                     /note="putative DAG/PE binding site [chemical binding]"
                     /db_xref="CDD:410409"
     Region          1213..1339
                     /region_name="C2B_Munc13"
                     /note="C2 domain second repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd04027"
                     /db_xref="CDD:175993"
     Site            order(1229,1235,1281,1283,1300)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175993"
     Region          1531..2019
                     /region_name="MUN"
                     /note="MUN domain; pfam06292"
                     /db_xref="CDD:461870"
     Region          2053..2172
                     /region_name="C2C_Munc13"
                     /note="C2 domain third repeat in Munc13 (mammalian
                     uncoordinated) proteins; cd08395"
                     /db_xref="CDD:176041"
     CDS             1..2205
                     /gene="UNC13C"
                     /coded_by="XM_041469233.1:129..6746"
                     /db_xref="GeneID:121354537"
ORIGIN      
        1 mvsalfksli ssyiykickg mftkksgnst krkescqskk eqdisqigqt knpkfsntfk
       61 stvkkiakcp sarnlsteee esnrefslsp tfsyrvaian glqrhifvan tnnedivqdl
      121 ssndsscses lsevktnskk neylshtmpv rrnrkslssl aasdgssdge rtlhtlklga
      181 lrklrkwkks qecvssdsel sswrrtwglr sksldragrh qksntlepgf sstgcisqth
      241 dvmemifkel qgisqietel selrghvnal kqsideisss vevvqneieq lrtgfvqsrr
      301 etrdihdyik qighpgnkas lrflnvpeer lekaesivyk ilmekmgfse aqstikiefa
      361 qrlgqqrdcp nakprpilvy fessqqrdli lkksyklkgt gigistdifs heikdkkerg
      421 lpssqtyesm dmklltvetk skmhdwespd sdkdlesdin knsyakisks ahqiktsttk
      481 gttespdtkd ldrtadngtf shrrsydnqs pefdtmekes kayysdvtpl whlqndfatp
      541 klsrsesdfs klcqsysedf senqyfsrtn gssllsssdr elwqrrqdds lnwygssqeq
      601 tfaqdmqqyp gqnesgniei vdsgvsngii hvsgdinhyd dsqlslqddl spwknwnqle
      661 qgadlgldss tqevfgydms spsdqqtdfg kgqssdlqyd tesydftldg tspscpglds
      721 etqsqwtgqy ddyqetnsvs syqnqnklpm myrsqselps ddseetapks whsrlsidls
      781 dktfsfpkfg stlqraksal evvwnkstqs lsgyedsgss fmgrfrtlsq stanessttl
      841 dsdvyaepyc ykaeyeeeli epagenetdy vevmeqvlak lenrtnsset seqvpeyeld
      901 qslyetpyam lpeeqydtqf dsviseeile vesdmapeve iredenqnvp emitevieip
      961 kkkrirpsfk eaalkaykkq mndleekila gdsgsvdeka rlvsasslda sklyavqafa
     1021 grglygidsm pdlrrkksfp ivrdvtlaar ksgismamli rtsinteemk ihvfkktlqa
     1081 liypissttp hnfeiwtatt ptycyecegl lwgiarqgmr csecgvkche kcqdllnadc
     1141 lqraaekssk hgaedktqni isamkermki reknrpevfe viqemfnisk edfvqytkaa
     1201 kqsvldgtsk wsakititvl caqglqakdk tgssdpyvtv qvgknkrrtk tifgnlnpvw
     1261 dekfyfechn stdrikvrvw dedddiksrv kqhfkkesdd flgqtiievr tlsgemdvwy
     1321 nlekrtdksa vsgairlkin veiegeekva pyhvqytclh enlfhyltev ksngvvkipe
     1381 vkgdeawkvy fddvaqeivd efamrygiey iyqamthfsc lsskymcpgv pavmstllan
     1441 inafyahtta atnvsasdrf aatnfgrekf iklldqlhns lridlskyrd nfpasnserl
     1501 qdlkstvdll tsitffrmkv lelqsppras tvvkdcvkac ldstykyifd ncydlysqlv
     1561 dqskkqevpk eeqgpttknl dfwaqlitlm vtiidedkta ytpilnqfpq elnmgkisae
     1621 imwtlfaqdm kyaleehekq rlckstdymn lhfkvkwfyn eyvrelsafk davpeyslwf
     1681 epfviqwlde nedvsmeflh galerdkkdg fqqtsdhalf scsvvdvftq lnqsfeiirk
     1741 lecpnpeals hlmrrfakti nkvlvqyaai issyfssycd kenvacilmn niqqlrvqle
     1801 kmfesmggke ldpeasvvlk elqvklsnvl delsvtyaas fqfviedcvr qmsnelnqmr
     1861 gngnaaankn saaidaeivl rplmdsldtt lsvsakicek tvlkrvlkel wklvlnkiek
     1921 qivlppltdq tgpqmifsaa kdlgqlsklk dhvireeaks ltlrqcaimd valvtikqyf
     1981 haggsglkkn flekspdlqs lkyalslytq ttdalikkfi atqtsqsqta nnsvgeisvq
     2041 vdisthpgtg ehkvtvkvva innlnwqtta mfrpfvevci lgpklsdkkr khgtktksnt
     2101 wspkynetfq fllsnedkpg ayevhlsvkd ycfaredrvi gmtviqlqai adrggcaawy
     2161 pllrsisvde tgltilrils qrnndevake fvrlktetrs aeeta
//
LOCUS       XP_041325168            1540 aa            linear   VRT 06-MAY-2021
DEFINITION  synemin [Pyrgilauda ruficollis].
ACCESSION   XP_041325168
VERSION     XP_041325168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469234.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1540
                     /product="synemin"
                     /calculated_mol_wt=174610
     Region          11..310
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     Region          <715..919
                     /region_name="PTZ00341"
                     /note="Ring-infected erythrocyte surface antigen;
                     Provisional"
                     /db_xref="CDD:173534"
     CDS             1..1540
                     /gene="SYNM"
                     /coded_by="XM_041469234.1:92..4714"
                     /db_xref="GeneID:121354538"
ORIGIN      
        1 mwrrwepgwd ekrelqelns rlrvfvtrvr eleeenrfla relaelreqe liglqvpeqe
       61 lawlrmqlee lsrakleael erdglrrele elralgaevl gmrrrlepel agqrallerl
      121 rgecvaleel llelqaehgh maerqrreav emrelrlnla alppplagls leeleetyem
      181 llnqscretl lryqeqiqvl qeqeaqrnre nlellreesr qcrqhledlh rqgqelcalr
      241 erleqemlal qdrhgaelee yqriidalee ekqfltmsit dylrdyqell qvkaglilei
      301 etyrallege skpwiiwree lagklsedii ntsynytdiy styqernrsk aspgaritdt
      361 rhrmpvtnms ssahysahst qagshtttgg rtfgrdllgs tyrpsttvtk derivtdhke
      421 lrtftpdyss wrstemqqkr iperkktevt tsstvsfske sahaersdkd hkpdaerskp
      481 gftrfpayel itnakptrye etiietrttl kdkrgdskpt dektsllkek dklqkqtkde
      541 kkktdeksli eetvdfgrkt eqkkyireev sqkvtgsdis tsrtlkseat kkdatvtses
      601 rskdvievpi sierpapdke pqrnkeirvq gvktsigret dehvtqsaet hhlriseaes
      661 slegqeqird eshrkgtlpt eniaenivad ilksftqsss sqmstdtkvt yfdkkeqede
      721 gklkteftvq sqvqgdiais degdlghlsn qdvrkvireg iegtpskeei edivhhglke
      781 sesgknvsvn veiveepldy tteertdfst pfqveeveds fpererhyge eeqnitftye
      841 dvkkkkprhe sfthveevte eddspieqky fvsvpdehpi inekdddsiy gqihieeest
      901 ikyswqdefl qgtqskreeg arspeetykv vgeeasahil kehpegersh vesiviekei
      961 kiphefqtsi kgllsketkd pkhqlkeale qlggslpesv keelsaitkd nkvdasnlaf
     1021 dikkvdqkee ggsvtivaev nlsqtlntde fdvdqlgevi ksekekatih slkkessdss
     1081 svevsshsdk ytpfadqeiy sssttrrsgg tgyhttervv ydgsvsetad ygeashssqs
     1141 adetksqrhv rvgpaevqrf eqvlyegpgs etlelsaaed lvqreglsef sqsvkhfklg
     1201 pneiqtteqv iftgpvttvv eemdsgnlsq kvstdfsrtt rrvtvgsrqv teevsfegsg
     1261 sdslalnssd glsqaegavd vsrsmrhfrl gpkevhtehv ifegpisgkv evsstrdfsq
     1321 aessvrqiqm gpqgfmtaee iiyqgpaseh teiteledqt lsggsrafrh vkispagtha
     1381 eeiifsgpia gmvedlsqia essessssvk hikvgsreta ytfqmdvsnl ggvsavksge
     1441 hqgatlvssq qepsarqpqv mvesnqlagn egtrsgyvls sfsqdqggkv veqsffdqtv
     1501 qvqrtvdqrs dtsegkkvaf lyldheeedd eendndgqwf
//
LOCUS       XP_041325169             682 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 93 [Pyrgilauda ruficollis].
ACCESSION   XP_041325169
VERSION     XP_041325169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..682
                     /product="WD repeat-containing protein 93"
                     /calculated_mol_wt=76327
     Region          400..440
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          444..481
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          486..554
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..682
                     /gene="WDR93"
                     /coded_by="XM_041469235.1:100..2148"
                     /db_xref="GeneID:121354539"
ORIGIN      
        1 mavntqkhll eipppsgkew pkeeeenffl ldpdrkrdvl pqplrminkl vmqvfesave
       61 iiekremlre aqkrkvqpik cfptaefqvt eranclavsg eyvfvglsvg laafnrcdfk
      121 dvcawdaakt eicaihasdl gskchvllav demglawlfc fhkesfllik ilnevedisq
      181 rspcvevvls rggdyagill qdstkawlev yqlpkdswle emeknagaae elacsdrrss
      241 cssvelpvsa vqadvkldpp ellltvrppk pitgtsfkgp ldalkevddg smlglgynhl
      301 ikdsqwelqe aifsstyqey leaegvtkee ipryatfhfl lpsqilmgpe mkeqpdipvg
      361 igvhwdgnhn fclyllnhsl kdkagsdlkp dvvwpcaspi acsavsscsr ylalagedat
      421 itiwdkhlgy plcvtailee rfirsihfly gsaaasdetc gadrvycgad pvcpiiqllv
      481 lctdssfylv kapkagkssi tlladrpenp nlivsavmpv lafpsavlif cwdgtvslmn
      541 tdtsqtvycf ctppshavap awqpvftvdn vncclllrgd ehqqadelvq srathstifl
      601 fdfnsyplke afpkkpdlsl kpvqelqwie rcniflqdrf rflperqqvl lemekqeywd
      661 clqakaaamd nerekvkgek kq
//
LOCUS       XP_041325170             245 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal membrane protein 11A [Pyrgilauda ruficollis].
ACCESSION   XP_041325170
VERSION     XP_041325170.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469236.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="peroxisomal membrane protein 11A"
                     /calculated_mol_wt=27655
     Region          1..236
                     /region_name="PEX11"
                     /note="Peroxisomal biogenesis factor 11 (PEX11);
                     pfam05648"
                     /db_xref="CDD:398979"
     CDS             1..245
                     /gene="PEX11A"
                     /coded_by="XM_041469236.1:61..798"
                     /db_xref="GeneID:121354540"
ORIGIN      
        1 megfvgftnr cqgrdqlfra tqytcmllsy lienkadkkk lvmklkqles smssgrkmfr
       61 lgnmvhalva arraaelpev vprlcltash lsralyfvcd avlwlrsvgl qphvdkpkwh
      121 twatkcyycs llmnlardcy eiswrleqaa leektkensv wqkhseelng vksdglhnfl
      181 cllfqilkrn ppllldlvkn lcdlsgpldt lgiyktnpgv igfcgilssl vgiltlasph
      241 lklkq
//
LOCUS       XP_041325171             731 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325171
VERSION     XP_041325171.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469237.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..731
                     /product="aryl hydrocarbon receptor nuclear translocator 2
                     isoform X1"
                     /calculated_mol_wt=80292
     Region          74..138
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(78..79,82..83,86,89..90,94,115..116)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(93,96,99..100,117,120..121,124,126..128,130)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          151..257
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          350..450
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..731
                     /gene="ARNT2"
                     /coded_by="XM_041469237.1:112..2307"
                     /db_xref="GeneID:121354541"
ORIGIN      
        1 matpaavnpp emasdipgsv alpvapmasg qvrmagsmps rggkrrsgmd fddedgegps
       61 kfsrydgdqi tgdkekfare nhseierrrr nkmtqyitel sdmvptcsal arkpdkltil
      121 rmavshmksm rgtgnkstdg aykpsflteq elkhlileaa dgflfvvaae tgrviyvsds
      181 vtpvlnqpqs ewfgstlyeq vhpddveklr eqlctsensm tgrildlktg tvkkegqqss
      241 mrmcmgsrrs ficrmrcgna pldhlplnri ttmrkryrng lgpvkegeaq yavvhctgyi
      301 kawppagmti peedadvgqg skyclvaigr lqvtsspvcm dmngmsvpte flsrhnsdgv
      361 itfvdprcis vigyqpqdll gkdilefchp edqshlresf qqvvklkgqv lsvmyrfrtk
      421 nrewmlirts sftfqnpysd eieyiictnt nvkqlqqqqa elevhqrdgl ssydlsqvpv
      481 psipanvheg gksvekpdai fsqerdprfa emfagitasd kkmmasasta gnqqlysqgs
      541 pfqpghsgkt fsssvvhvpg vndiqsssst gqnltqisrq lnqsqvawtg nrppfpgqqi
      601 psqsgkaqss pfgigtshty padpssyspl sspatsspsg naysslanrs agfaeggqss
      661 gqfqgrpsev wsqwqsqhhn qqsgdqhshp qpnqsevfqd mlpmpgdptq gtgnyniedf
      721 adlgmfppfs e
//
LOCUS       XP_041325172             716 aa            linear   VRT 06-MAY-2021
DEFINITION  aryl hydrocarbon receptor nuclear translocator 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325172
VERSION     XP_041325172.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469238.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..716
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..716
                     /product="aryl hydrocarbon receptor nuclear translocator 2
                     isoform X2"
                     /calculated_mol_wt=78567
     Region          61..123
                     /region_name="bHLH-PAS_ARNT"
                     /note="basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS)
                     domain found in aryl hydrocarbon receptor nuclear
                     translocator (ARNT) and similar proteins; cd18947"
                     /db_xref="CDD:381517"
     Site            order(63..64,67..68,71,74..75,79,100..101)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381517"
     Site            order(78,81,84..85,102,105..106,109,111..113,115)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:381517"
     Region          136..242
                     /region_name="PAS"
                     /note="PAS fold; pfam00989"
                     /db_xref="CDD:395786"
     Region          335..435
                     /region_name="PAS_11"
                     /note="PAS domain; pfam14598"
                     /db_xref="CDD:464214"
     CDS             1..716
                     /gene="ARNT2"
                     /coded_by="XM_041469238.1:112..2262"
                     /db_xref="GeneID:121354541"
ORIGIN      
        1 matpaavnpp emasdipgsv alpvapmasg qvrmagsmps rggkrrsgmd fddedgegps
       61 kfsrenhsei errrrnkmtq yitelsdmvp tcsalarkpd kltilrmavs hmksmrgtgn
      121 kstdgaykps flteqelkhl ileaadgflf vvaaetgrvi yvsdsvtpvl nqpqsewfgs
      181 tlyeqvhpdd veklreqlct sensmtgril dlktgtvkke gqqssmrmcm gsrrsficrm
      241 rcgnapldhl plnrittmrk ryrnglgpvk egeaqyavvh ctgyikawpp agmtipeeda
      301 dvgqgskycl vaigrlqvts spvcmdmngm svpteflsrh nsdgvitfvd prcisvigyq
      361 pqdllgkdil efchpedqsh lresfqqvvk lkgqvlsvmy rfrtknrewm lirtssftfq
      421 npysdeieyi ictntnvkql qqqqaelevh qrdglssydl sqvpvpsipa nvheggksve
      481 kpdaifsqer dprfaemfag itasdkkmma sastagnqql ysqgspfqpg hsgktfsssv
      541 vhvpgvndiq sssstgqnlt qisrqlnqsq vawtgnrppf pgqqipsqsg kaqsspfgig
      601 tshtypadps sysplsspat sspsgnayss lanrsagfae ggqssgqfqg rpsevwsqwq
      661 sqhhnqqsgd qhshpqpnqs evfqdmlpmp gdptqgtgny niedfadlgm fppfse
//
LOCUS       XP_041325173             763 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family A member 2 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325173
VERSION     XP_041325173.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469239.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="amyloid-beta A4 precursor protein-binding family
                     A member 2 isoform X1"
                     /calculated_mol_wt=84686
     Region          369..549
                     /region_name="PTB_X11"
                     /note="X11-like Phosphotyrosine-binding (PTB) domain;
                     cd01208"
                     /db_xref="CDD:269919"
     Site            order(381,479,519)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269919"
     Site            order(399,468,471..476,527,538,541)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269919"
     Region          581..666
                     /region_name="PDZ1_APBA1_3-like"
                     /note="PDZ domain 1 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06720"
                     /db_xref="CDD:467203"
     Site            order(592..598,612,615,645,649,652..653)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467203"
     Region          670..747
                     /region_name="PDZ2_APBA1_3-like"
                     /note="PDZ domain 2 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06793"
                     /db_xref="CDD:467255"
     Site            order(684..690,695,698,727,731,734..735)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467255"
     CDS             1..763
                     /gene="APBA2"
                     /coded_by="XM_041469239.1:229..2520"
                     /db_xref="GeneID:121354543"
ORIGIN      
        1 manrkhqsta asmldhrara cptsshnrep eneesdlpie dyaakeaela tvragsptpv
       61 ehecndhsgd gdsssdyvnn tseeedydeg lpeeeegity yirycpedds ylegmdcnge
      121 eyvpheehhv etdecqeave ewaegkiqhq denevmdrqe wqegqdngiq iledeassle
      181 iqdqeeniqy cqsegdypdy ypaeangnsq gispyhsrke daeleeqeed idqivaeikm
      241 smsmssinst temspehtgt enmahdyket cskgeavhsa nrhegrpksl nipsaskhsg
      301 dvhrgfkaks rspedrqkwp qeqmcngleq prkqqrsdln gpadnnnppe tkkvssfpsf
      361 vdvpgpcepe dlidgiifaa nylgstqlls ernpsknirm mqaqeavsrv khivisqatr
      421 mqkaakikkk atsegdsqal tevdlfistq rikvlnadtq etmmdhalrt isyiadigni
      481 vvlmarrrmp rsasqdciet tpgaqegkkq ykmichvfes edaqliaqsi gqafsvayqe
      541 flranginpe dlsqkeysdi intqemyndd lihfsnsenc kelqlekqkg eilgvvives
      601 gwgsilptvi lanmmnggpa arsgklsigd qimsingtsl vglplatcqg iikglknqtq
      661 vklnivscpp vttvlikrpd lkyqlgfsvq ngiicslmrg giaerggvrv ghriieingq
      721 svvataheki vqalsnsvge ihmktmpaam frlltgqetp lyi
//
LOCUS       XP_041325174             755 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family A member 2 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325174
VERSION     XP_041325174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..755
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..755
                     /product="amyloid-beta A4 precursor protein-binding family
                     A member 2 isoform X2"
                     /calculated_mol_wt=83836
     Region          369..541
                     /region_name="PTB_X11"
                     /note="X11-like Phosphotyrosine-binding (PTB) domain;
                     cd01208"
                     /db_xref="CDD:269919"
     Site            order(381,471,511)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269919"
     Site            order(399,460,463..468,519,530,533)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269919"
     Region          573..658
                     /region_name="PDZ1_APBA1_3-like"
                     /note="PDZ domain 1 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06720"
                     /db_xref="CDD:467203"
     Site            order(584..590,604,607,637,641,644..645)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467203"
     Region          662..739
                     /region_name="PDZ2_APBA1_3-like"
                     /note="PDZ domain 2 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06793"
                     /db_xref="CDD:467255"
     Site            order(676..682,687,690,719,723,726..727)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467255"
     CDS             1..755
                     /gene="APBA2"
                     /coded_by="XM_041469240.1:227..2494"
                     /db_xref="GeneID:121354543"
ORIGIN      
        1 manrkhqsta asmldhrara cptsshnrep eneesdlpie dyaakeaela tvragsptpv
       61 ehecndhsgd gdsssdyvnn tseeedydeg lpeeeegity yirycpedds ylegmdcnge
      121 eyvpheehhv etdecqeave ewaegkiqhq denevmdrqe wqegqdngiq iledeassle
      181 iqdqeeniqy cqsegdypdy ypaeangnsq gispyhsrke daeleeqeed idqivaeikm
      241 smsmssinst temspehtgt enmahdyket cskgeavhsa nrhegrpksl nipsaskhsg
      301 dvhrgfkaks rspedrqkwp qeqmcngleq prkqqrsdln gpadnnnppe tkkvssfpsf
      361 vdvpgpcepe dlidgiifaa nylgstqlls ernpsknirm mqaqeavsrv krmqkaakik
      421 kkatsegdsq altevdlfis tqrikvlnad tqetmmdhal rtisyiadig nivvlmarrr
      481 mprsasqdci ettpgaqegk kqykmichvf esedaqliaq sigqafsvay qeflrangin
      541 pedlsqkeys diintqemyn ddlihfsnse nckelqlekq kgeilgvviv esgwgsilpt
      601 vilanmmngg paarsgklsi gdqimsingt slvglplatc qgiikglknq tqvklnivsc
      661 ppvttvlikr pdlkyqlgfs vqngiicslm rggiaerggv rvghriiein gqsvvatahe
      721 kivqalsnsv geihmktmpa amfrlltgqe tplyi
//
LOCUS       XP_041325176             743 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family A member 2 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325176
VERSION     XP_041325176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469242.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..743
                     /product="amyloid-beta A4 precursor protein-binding family
                     A member 2 isoform X3"
                     /calculated_mol_wt=82454
     Region          369..529
                     /region_name="PTB_X11"
                     /note="X11-like Phosphotyrosine-binding (PTB) domain;
                     cd01208"
                     /db_xref="CDD:269919"
     Site            order(381,459,499)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269919"
     Site            order(399,448,451..456,507,518,521)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269919"
     Region          561..646
                     /region_name="PDZ1_APBA1_3-like"
                     /note="PDZ domain 1 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06720"
                     /db_xref="CDD:467203"
     Site            order(572..578,592,595,625,629,632..633)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467203"
     Region          650..727
                     /region_name="PDZ2_APBA1_3-like"
                     /note="PDZ domain 2 of amyloid-beta A4 precursor
                     protein-binding family A member 1 (APBA1), APBA2, APBA3,
                     and related domains; cd06793"
                     /db_xref="CDD:467255"
     Site            order(664..670,675,678,707,711,714..715)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467255"
     CDS             1..743
                     /gene="APBA2"
                     /coded_by="XM_041469242.1:227..2458"
                     /db_xref="GeneID:121354543"
ORIGIN      
        1 manrkhqsta asmldhrara cptsshnrep eneesdlpie dyaakeaela tvragsptpv
       61 ehecndhsgd gdsssdyvnn tseeedydeg lpeeeegity yirycpedds ylegmdcnge
      121 eyvpheehhv etdecqeave ewaegkiqhq denevmdrqe wqegqdngiq iledeassle
      181 iqdqeeniqy cqsegdypdy ypaeangnsq gispyhsrke daeleeqeed idqivaeikm
      241 smsmssinst temspehtgt enmahdyket cskgeavhsa nrhegrpksl nipsaskhsg
      301 dvhrgfkaks rspedrqkwp qeqmcngleq prkqqrsdln gpadnnnppe tkkvssfpsf
      361 vdvpgpcepe dlidgiifaa nylgstqlls ernpsknirm mqaqeavsrv ktsegdsqal
      421 tevdlfistq rikvlnadtq etmmdhalrt isyiadigni vvlmarrrmp rsasqdciet
      481 tpgaqegkkq ykmichvfes edaqliaqsi gqafsvayqe flranginpe dlsqkeysdi
      541 intqemyndd lihfsnsenc kelqlekqkg eilgvvives gwgsilptvi lanmmnggpa
      601 arsgklsigd qimsingtsl vglplatcqg iikglknqtq vklnivscpp vttvlikrpd
      661 lkyqlgfsvq ngiicslmrg giaerggvrv ghriieingq svvataheki vqalsnsvge
      721 ihmktmpaam frlltgqetp lyi
//
LOCUS       XP_041325177             721 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325177
VERSION     XP_041325177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469243.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..721
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82581
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..721
                     /gene="MAPK6"
                     /coded_by="XM_041469243.1:811..2976"
                     /db_xref="GeneID:121354544"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvavkk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lncvyivqey metdlanlle
      121 qgplledhar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell nvipvyirnd mtephkpltq llpgispeal dfleqiltfs
      301 pmdrltaeea lshpymsiys fptdepissh pfhiedevdd illmdeshsh iynweryhes
      361 qfsdhdwpih nnyeadevqr dpralsdvtd eeevqvdprk yldgdrekyl edpafdthfs
      421 tepcwqysdh henkycdlec shtcnykmrs ssyldnlvwr dsevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcekngl vkaqialeea sqqlvekere knqgfdfdsf iaetiqlslq
      541 hestdvdkln dlnssvsqie lkgiisksvs rekqekgman laqlealyqt swdsqfvsgg
      601 egcflidqfc cevrkdeqve kentytsyld kffskkedae mlepepveeg klgekerees
      661 flsnsgellf nkqleaigip qfhspvgspl ksiqatltps amksspqiph ktyssilkhl
      721 n
//
LOCUS       XP_041325178             721 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325178
VERSION     XP_041325178.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469244.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..721
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82581
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..721
                     /gene="MAPK6"
                     /coded_by="XM_041469244.1:862..3027"
                     /db_xref="GeneID:121354544"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvavkk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lncvyivqey metdlanlle
      121 qgplledhar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell nvipvyirnd mtephkpltq llpgispeal dfleqiltfs
      301 pmdrltaeea lshpymsiys fptdepissh pfhiedevdd illmdeshsh iynweryhes
      361 qfsdhdwpih nnyeadevqr dpralsdvtd eeevqvdprk yldgdrekyl edpafdthfs
      421 tepcwqysdh henkycdlec shtcnykmrs ssyldnlvwr dsevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcekngl vkaqialeea sqqlvekere knqgfdfdsf iaetiqlslq
      541 hestdvdkln dlnssvsqie lkgiisksvs rekqekgman laqlealyqt swdsqfvsgg
      601 egcflidqfc cevrkdeqve kentytsyld kffskkedae mlepepveeg klgekerees
      661 flsnsgellf nkqleaigip qfhspvgspl ksiqatltps amksspqiph ktyssilkhl
      721 n
//
LOCUS       XP_041325179             721 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325179
VERSION     XP_041325179.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469245.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..721
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82581
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..721
                     /gene="MAPK6"
                     /coded_by="XM_041469245.1:770..2935"
                     /db_xref="GeneID:121354544"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvavkk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lncvyivqey metdlanlle
      121 qgplledhar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell nvipvyirnd mtephkpltq llpgispeal dfleqiltfs
      301 pmdrltaeea lshpymsiys fptdepissh pfhiedevdd illmdeshsh iynweryhes
      361 qfsdhdwpih nnyeadevqr dpralsdvtd eeevqvdprk yldgdrekyl edpafdthfs
      421 tepcwqysdh henkycdlec shtcnykmrs ssyldnlvwr dsevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcekngl vkaqialeea sqqlvekere knqgfdfdsf iaetiqlslq
      541 hestdvdkln dlnssvsqie lkgiisksvs rekqekgman laqlealyqt swdsqfvsgg
      601 egcflidqfc cevrkdeqve kentytsyld kffskkedae mlepepveeg klgekerees
      661 flsnsgellf nkqleaigip qfhspvgspl ksiqatltps amksspqiph ktyssilkhl
      721 n
//
LOCUS       XP_041325180             721 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325180
VERSION     XP_041325180.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469246.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..721
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82581
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..721
                     /gene="MAPK6"
                     /coded_by="XM_041469246.1:1186..3351"
                     /db_xref="GeneID:121354544"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvavkk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lncvyivqey metdlanlle
      121 qgplledhar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell nvipvyirnd mtephkpltq llpgispeal dfleqiltfs
      301 pmdrltaeea lshpymsiys fptdepissh pfhiedevdd illmdeshsh iynweryhes
      361 qfsdhdwpih nnyeadevqr dpralsdvtd eeevqvdprk yldgdrekyl edpafdthfs
      421 tepcwqysdh henkycdlec shtcnykmrs ssyldnlvwr dsevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcekngl vkaqialeea sqqlvekere knqgfdfdsf iaetiqlslq
      541 hestdvdkln dlnssvsqie lkgiisksvs rekqekgman laqlealyqt swdsqfvsgg
      601 egcflidqfc cevrkdeqve kentytsyld kffskkedae mlepepveeg klgekerees
      661 flsnsgellf nkqleaigip qfhspvgspl ksiqatltps amksspqiph ktyssilkhl
      721 n
//
LOCUS       XP_041325181             721 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325181
VERSION     XP_041325181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469247.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..721
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82581
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..721
                     /gene="MAPK6"
                     /coded_by="XM_041469247.1:676..2841"
                     /db_xref="GeneID:121354544"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvavkk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lncvyivqey metdlanlle
      121 qgplledhar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell nvipvyirnd mtephkpltq llpgispeal dfleqiltfs
      301 pmdrltaeea lshpymsiys fptdepissh pfhiedevdd illmdeshsh iynweryhes
      361 qfsdhdwpih nnyeadevqr dpralsdvtd eeevqvdprk yldgdrekyl edpafdthfs
      421 tepcwqysdh henkycdlec shtcnykmrs ssyldnlvwr dsevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcekngl vkaqialeea sqqlvekere knqgfdfdsf iaetiqlslq
      541 hestdvdkln dlnssvsqie lkgiisksvs rekqekgman laqlealyqt swdsqfvsgg
      601 egcflidqfc cevrkdeqve kentytsyld kffskkedae mlepepveeg klgekerees
      661 flsnsgellf nkqleaigip qfhspvgspl ksiqatltps amksspqiph ktyssilkhl
      721 n
//
LOCUS       XP_041325182             721 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325182
VERSION     XP_041325182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..721
                     /product="mitogen-activated protein kinase 6"
                     /calculated_mol_wt=82581
     Region          14..355
                     /region_name="STKc_MAPK4_6"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mitogen-Activated Protein Kinases 4 (also called ERK4) and
                     6 (also called ERK3); cd07854"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,64,78,108..111,114,116..117,
                     152,154,156..157,159,170..171,174,189,191..194,196,234)
                     /site_type="active"
                     /db_xref="CDD:143359"
     Site            order(26..29,31..32,34,47,49,78,108..111,114,117,154,
                     156..157,159,170..171)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:143359"
     Site            order(64,116,152,154,174,189,191..194,196,234)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:143359"
     Site            order(75,112..113,118,128,131,138,160..163,165,319,321,
                     324)
                     /site_type="other"
                     /note="KIM docking site [polypeptide binding]"
                     /db_xref="CDD:143359"
     Site            170..196
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:143359"
     CDS             1..721
                     /gene="MAPK6"
                     /coded_by="XM_041469248.1:843..3008"
                     /db_xref="GeneID:121354544"
ORIGIN      
        1 maekfeslmn ihgfdlgsry mdlkplgcgg nglvfsavdn dcdkrvavkk ivltdpqsvk
       61 halreikiir rldhdnivkv feilgpsgsq ltddvgslte lncvyivqey metdlanlle
      121 qgplledhar lfmyqllrgl kyihsanvlh rdlkpanlfi ntedlvlkig dfglarimdp
      181 hyshkghlse glvtkwyrsp rlllspnnyt kaidmwaagc ifaemltgkt lfagaheleq
      241 mqlilesipv vheedrqell nvipvyirnd mtephkpltq llpgispeal dfleqiltfs
      301 pmdrltaeea lshpymsiys fptdepissh pfhiedevdd illmdeshsh iynweryhes
      361 qfsdhdwpih nnyeadevqr dpralsdvtd eeevqvdprk yldgdrekyl edpafdthfs
      421 tepcwqysdh henkycdlec shtcnykmrs ssyldnlvwr dsevnhyyep kliidlsnwk
      481 eqskeksdkk gkskcekngl vkaqialeea sqqlvekere knqgfdfdsf iaetiqlslq
      541 hestdvdkln dlnssvsqie lkgiisksvs rekqekgman laqlealyqt swdsqfvsgg
      601 egcflidqfc cevrkdeqve kentytsyld kffskkedae mlepepveeg klgekerees
      661 flsnsgellf nkqleaigip qfhspvgspl ksiqatltps amksspqiph ktyssilkhl
      721 n
//
LOCUS       XP_041325183             221 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-27A [Pyrgilauda ruficollis].
ACCESSION   XP_041325183
VERSION     XP_041325183.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469249.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="ras-related protein Rab-27A"
                     /calculated_mol_wt=24990
     Region          6..185
                     /region_name="Rab27A"
                     /note="Rab GTPase family 27a (Rab27a); cd04127"
                     /db_xref="CDD:206700"
     Site            6..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206700"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206700"
     Site            order(19..24,134,136,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206700"
     Site            order(24..34,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206700"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206700"
     Site            order(39,43..50,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206700"
     Site            order(42,44..46,71,73,80..81,84,88,90..93)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206700"
     Site            order(42..43,45,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206700"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206700"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206700"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206700"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206700"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206700"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206700"
     Site            120..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206700"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206700"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206700"
     Site            179..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206700"
     CDS             1..221
                     /gene="RAB27A"
                     /coded_by="XM_041469249.1:237..902"
                     /db_xref="GeneID:121354545"
ORIGIN      
        1 msdgdydyli kflalgdsgv gktsllyqyt dgkfnskfit tvgidfrekr vvyrpngpdg
       61 vggrgqrihl qlwdtagqer frslttaffr damgflllfd ltneqsflnv rnwisqlqmh
      121 aycenpdivl cgnksdledq rmvkeedake laekygipyf etsaangnnv skaietlldl
      181 imkrmercvd kswipegvvr snghssteql neeqekgrcg c
//
LOCUS       XP_041325184             221 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-27A [Pyrgilauda ruficollis].
ACCESSION   XP_041325184
VERSION     XP_041325184.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469250.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="ras-related protein Rab-27A"
                     /calculated_mol_wt=24990
     Region          6..185
                     /region_name="Rab27A"
                     /note="Rab GTPase family 27a (Rab27a); cd04127"
                     /db_xref="CDD:206700"
     Site            6..11
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206700"
     Site            16..23
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206700"
     Site            order(19..24,134,136,164..165)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206700"
     Site            order(24..34,39..40)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206700"
     Site            order(34,39..47)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206700"
     Site            order(39,43..50,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            41
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206700"
     Site            order(42,44..46,71,73,80..81,84,88,90..93)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206700"
     Site            order(42..43,45,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206700"
     Site            42..46
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206700"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206700"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206700"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206700"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206700"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206700"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206700"
     Site            120..130
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206700"
     Site            133..136
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206700"
     Site            163..165
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206700"
     Site            179..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206700"
     CDS             1..221
                     /gene="RAB27A"
                     /coded_by="XM_041469250.1:200..865"
                     /db_xref="GeneID:121354545"
ORIGIN      
        1 msdgdydyli kflalgdsgv gktsllyqyt dgkfnskfit tvgidfrekr vvyrpngpdg
       61 vggrgqrihl qlwdtagqer frslttaffr damgflllfd ltneqsflnv rnwisqlqmh
      121 aycenpdivl cgnksdledq rmvkeedake laekygipyf etsaangnnv skaietlldl
      181 imkrmercvd kswipegvvr snghssteql neeqekgrcg c
//
LOCUS       XP_041325185             827 aa            linear   VRT 06-MAY-2021
DEFINITION  NT-3 growth factor receptor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325185
VERSION     XP_041325185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..827
                     /product="NT-3 growth factor receptor isoform X1"
                     /calculated_mol_wt=93154
     Region          8..>160
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          103..162
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          152..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..208
                     /region_name="LRRCT_2"
                     /note="Leucine rich repeat C-terminal motif; pfam16920"
                     /db_xref="CDD:465313"
     Region          214..297
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          227..231
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409301"
     Region          240..243
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409301"
     Region          256..270
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409301"
     Region          280..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409301"
     Region          304..396
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          319..323
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          332..336
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          361..365
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          375..380
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          388..391
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          534..820
                     /region_name="PTKc_TrkC"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Tropomyosin Related Kinase C; cd05094"
                     /db_xref="CDD:270676"
     Site            order(546..550,554,572,574,619..622,625..626,681,685..686,
                     688,699,717..721,730,764)
                     /site_type="active"
                     /db_xref="CDD:270676"
     Site            order(546..547,549..550,554,572,574,619..622,625..626,
                     685..686,688,699)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270676"
     Site            order(681,685,717..721,730,764)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270676"
     Site            698..723
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270676"
     CDS             1..827
                     /gene="NTRK3"
                     /coded_by="XM_041469251.1:47..2530"
                     /db_xref="GeneID:121354547"
ORIGIN      
        1 mdvslcptkc tfwrvfllws iwgdyllsvl acpanclcsk tdinckkpdd gnlfpllegq
       61 dsgssngnts initdisrni tsihienwkn lqtlnavdme lytglqrlti rnsglrniqp
      121 rafaknphlh yidlsgnrlt tlswqlfqtl rlfelrlern lfncscdirw iqlwqeksea
      181 nlqyqdlycm tmdaaiitlk emnitqcdlp eisvshvnlt vregenavit cngsgsplpd
      241 vdwtvaelhs inthqtnlnw tnvhainltl vnvtsedngf lltciaenvv gmsnasvllt
      301 vyyppriltl eepvlhmdhc iafavhgnpa ptlhwlhngq vlreteiirm efyqqgevse
      361 gcllfnkpth ynngnytiva tnqlgsanqt ikghflekpf pestdsfvsi gdyevsptpp
      421 itvthkpeed tfgvsiavgl aafacvllvv lfiminkygr rskfgmkgpv avisgeedsa
      481 splhhinhgi ttpssldagp dtvvigmtri pvienpqyfr qghnchkpdt yvqhikrrdi
      541 vlkrelgega fgkvflaecy nlsptndkml vavkalkdpt laarkdfqre aelltnlqhe
      601 hivkfygvcg dgdplimvfe ymkhgdlnkf lrahgpdami lvdgqprqak gelglsqmlh
      661 iasqiasgmv ylasqhfvhr dlatrnclvg anllvkigdf gmsrdvystd yyrvgghtml
      721 pirwmppesi myrkfttesd vwsfgvilwe iftygkqpwf qlsnteviec itqgrvlerp
      781 rvcpkevydi mlgcwqrepq qrlnikeiyk ilhalgkatp iyldilg
//
LOCUS       XP_041325186             852 aa            linear   VRT 06-MAY-2021
DEFINITION  NT-3 growth factor receptor isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325186
VERSION     XP_041325186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..852
                     /product="NT-3 growth factor receptor isoform X2"
                     /calculated_mol_wt=95800
     Region          8..>160
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          103..162
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          105..128
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          129..151
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          152..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          163..208
                     /region_name="LRRCT_2"
                     /note="Leucine rich repeat C-terminal motif; pfam16920"
                     /db_xref="CDD:465313"
     Region          214..297
                     /region_name="ig"
                     /note="Immunoglobulin domain; pfam00047"
                     /db_xref="CDD:395002"
     Region          227..231
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409031"
     Region          240..243
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409031"
     Region          256..270
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409031"
     Region          280..286
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409031"
     Region          304..396
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          319..323
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          332..336
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          361..365
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          375..380
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          388..391
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          534..845
                     /region_name="PTKc_TrkC"
                     /note="Catalytic domain of the Protein Tyrosine Kinase,
                     Tropomyosin Related Kinase C; cd05094"
                     /db_xref="CDD:270676"
     Site            order(546..550,554,572,574,619..622,625..626,681,685..686,
                     688,699,742..746,755,789)
                     /site_type="active"
                     /db_xref="CDD:270676"
     Site            order(546..547,549..550,554,572,574,619..622,625..626,
                     685..686,688,699)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270676"
     Site            order(681,685,742..746,755,789)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270676"
     Site            order(698..713,739..748)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270676"
     CDS             1..852
                     /gene="NTRK3"
                     /coded_by="XM_041469252.1:47..2605"
                     /db_xref="GeneID:121354547"
ORIGIN      
        1 mdvslcptkc tfwrvfllws iwgdyllsvl acpanclcsk tdinckkpdd gnlfpllegq
       61 dsgssngnts initdisrni tsihienwkn lqtlnavdme lytglqrlti rnsglrniqp
      121 rafaknphlh yidlsgnrlt tlswqlfqtl rlfelrlern lfncscdirw iqlwqeksea
      181 nlqyqdlycm tmdaaiitlk emnitqcdlp eisvshvnlt vregenavit cngsgsplpd
      241 vdwtvaelhs inthqtnlnw tnvhainltl vnvtsedngf lltciaenvv gmsnasvllt
      301 vyyppriltl eepvlhmdhc iafavhgnpa ptlhwlhngq vlreteiirm efyqqgevse
      361 gcllfnkpth ynngnytiva tnqlgsanqt ikghflekpf pestdsfvsi gdyevsptpp
      421 itvthkpeed tfgvsiavgl aafacvllvv lfiminkygr rskfgmkgpv avisgeedsa
      481 splhhinhgi ttpssldagp dtvvigmtri pvienpqyfr qghnchkpdt yvqhikrrdi
      541 vlkrelgega fgkvflaecy nlsptndkml vavkalkdpt laarkdfqre aelltnlqhe
      601 hivkfygvcg dgdplimvfe ymkhgdlnkf lrahgpdami lvdgqprqak gelglsqmlh
      661 iasqiasgmv ylasqhfvhr dlatrnclvg anllvkigdf gmsrdvystd yyregprlkg
      721 qlsaawqrqr lapsaaatvg ghtmlpirwm ppesimyrkf ttesdvwsfg vilweiftyg
      781 kqpwfqlsnt eviecitqgr vlerprvcpk evydimlgcw qrepqqrlni keiykilhal
      841 gkatpiyldi lg
//
LOCUS       XP_041325187             711 aa            linear   VRT 06-MAY-2021
DEFINITION  chondroitin sulfate synthase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325187
VERSION     XP_041325187.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469253.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..711
                     /product="chondroitin sulfate synthase 1"
                     /calculated_mol_wt=82141
     Region          2..217
                     /region_name="Galactosyl_T"
                     /note="Galactosyltransferase; cl21608"
                     /db_xref="CDD:473923"
     Region          147..686
                     /region_name="CHGN"
                     /note="Chondroitin N-acetylgalactosaminyltransferase;
                     pfam05679"
                     /db_xref="CDD:461712"
     CDS             1..711
                     /gene="CHSY1"
                     /coded_by="XM_041469253.1:43..2178"
                     /db_xref="GeneID:121354548"
ORIGIN      
        1 mtaqkylrsr avaahrtwsk tipgkveffs segsdtsipi pivplpgvdd syppqkksfm
       61 mlkymhdhyl dkyewfmrad ddvyikgdkl enflrslnss eplflgqtgl gtteemgkla
      121 lepgenfcmg gpgvimsrev lrrmvphige clremytthe dvevgrcvrr fagvqcvwsy
      181 emqqlfyeny eknkkgyird lrnskihrai tlhpnknppy qyrlhsymls rkiaelrhrt
      241 vqlhreivlm skysnteihk edlqlgmpps fmrfqprhre eilewefltg kylysgadgq
      301 pprrgmdssq realddivmq vmeminanak trgriidfke iqygyrrvnp mygaeyvldl
      361 lllykkhkgk kmtvpvrrha ylqqtfskiq fmeheemdak elaskinqds gslsflsnsl
      421 kmfvpfqlsr skaerkelkd kkinilipls grfdmfarfm gnfektclip nqnvklvvll
      481 fnsnsnpdka kqielmrdyr skypkadmqv lpvsgefsra lalevgssqf qnesllffcd
      541 vdlvfttefl qrcrantvlg qqvyfpiifs qydpkivysg kvpsdnhfaf tqktgfwrny
      601 gfgitciykg dllraggfdv siqgwgledv dlfnkviqag lktfrsqeig vvhvhhpvfc
      661 dpnldpkqyk mclgskasty gstqqlaeiw fekndpnfgk ssntngsvrt a
//
LOCUS       XP_041325188             210 aa            linear   VRT 06-MAY-2021
DEFINITION  stAR-related lipid transfer protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325188
VERSION     XP_041325188.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469254.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="stAR-related lipid transfer protein 5"
                     /calculated_mol_wt=22996
     Region          1..208
                     /region_name="SRPBCC"
                     /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC)
                     ligand-binding domain superfamily; cl14643"
                     /db_xref="CDD:472699"
     Site            order(48,50,52,61..63,65..66,83,94,96,98,100,115,117,119,
                     129,131,152..153,155,157,169,171,173,175,186..190,
                     192..193,196..198,201)
                     /site_type="active"
                     /note="hydrophobic ligand binding site [active]"
                     /db_xref="CDD:176854"
     CDS             1..210
                     /gene="STARD5"
                     /coded_by="XM_041469254.1:64..696"
                     /db_xref="GeneID:121354549"
ORIGIN      
        1 mdcagraeaa aeqlqlyrrd pegwrgcrst gevavswrps aefagnlykg egilpaspqn
       61 vwecikpvag glrtkwdqnv kdfevieais dtvsicrttt psacmriisp refvdvvvmk
      121 qyedgtmqsa atnvehplcp pqpnfvrgfn ypcgcfcipv pgepnrtell tffqtdlggy
      181 lpqtvvdsff pssisgfysn ltkavkalka
//
LOCUS       XP_041325190             174 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-related protein A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325190
VERSION     XP_041325190.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469256.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="bcl-2-related protein A1"
                     /calculated_mol_wt=20002
     Region          7..142
                     /region_name="Bcl-2_like"
                     /note="Apoptosis regulator proteins of the Bcl-2 family,
                     named after B-cell lymphoma 2. This alignment model spans
                     what have been described as Bcl-2 homology regions BH1,
                     BH2, BH3, and BH4. Many members of this family have an
                     additional C-terminal transmembrane...; cd06845"
                     /db_xref="CDD:132900"
     Site            7..20
                     /site_type="active"
                     /note="BH4 [active]"
                     /db_xref="CDD:132900"
     Site            37..45
                     /site_type="active"
                     /note="BH3 [active]"
                     /db_xref="CDD:132900"
     Site            order(40..41,43..44,48,51..52,69..70,73..74,77..78,85,
                     87..88,90..91,95,99)
                     /site_type="active"
                     /note="BH3-homology region binding site [active]"
                     /db_xref="CDD:132900"
     Site            order(77..79,84..96)
                     /site_type="active"
                     /note="BH1 [active]"
                     /db_xref="CDD:132900"
     CDS             1..174
                     /gene="BCL2A1"
                     /coded_by="XM_041469256.1:1..525"
                     /db_xref="GeneID:121354551"
ORIGIN      
        1 metaefyyvy ylaqdylqyv lqeshlgpaq trvahvlrtm asslqdqtee alrplldrid
       61 itsvavakri fngvmdekfa dgntnwgrim tiftfggllt kklqehgvql taeekeqisy
      121 fiteyiinnk aewidanggw engfltkfer rsllsfskit alfiavvslf reyy
//
LOCUS       XP_041325191            1180 aa            linear   VRT 06-MAY-2021
DEFINITION  cartilage intermediate layer protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325191
VERSION     XP_041325191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1180
                     /product="cartilage intermediate layer protein 1"
                     /calculated_mol_wt=132265
     Region          77..127
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          151..226
                     /region_name="CarboxypepD_reg"
                     /note="Carboxypeptidase regulatory-like domain; pfam13620"
                     /db_xref="CDD:433354"
     Region          234..305
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     Region          <1053..1161
                     /region_name="PHA03377"
                     /note="EBNA-3C; Provisional"
                     /db_xref="CDD:177614"
     CDS             1..1180
                     /gene="LOC121354552"
                     /coded_by="XM_041469257.1:255..3797"
                     /db_xref="GeneID:121354552"
ORIGIN      
        1 mvtmkgwill llwgatsvlg qrilkpalsr vqigqrtfsp lvmlslestr sssrrgdptf
       61 tyvrrsplvq dskrflspws kwsecsakcg qtgvqkrtrs claeplwgvh cneateegrl
      121 cighvcsacn itcpmghvna dcdtcmceda tlhgkvsled gspaadarvy lqakklkllt
      181 tadnrgmfmi pgvcpdgknt lkikkakyat atvtvpesnr rnlaiqvqlh rsgkpyvfrs
      241 pedkarrvgq svslccdarg spapdrylwy hngslldpsl ykyknnlilk nlkreqsgey
      301 fckassaggs aksqvaklav igrqeaacds qpqshlirlp hdcfqkatns fyydvgkcpa
      361 ktcvgkldkg lrckdnvsyc cgvskmetrd iscdgytlpt kvivecgcki ctetkimvrg
      421 rataadngep lrfghiymgn krvsmtgykg tfsihvpadm erlvltfvdr lqkfvnttkv
      481 lpfkenggav fheikllrkk apvtlesaet nvislgemee ddpiaeleip pnafyrknge
      541 vysgkvkasv tfldprnist apvtqsdlnf vdeegdvfpl rtygmfsvdf tdeqgtesln
      601 aekvkvhlda aqvkmpehvq emklwslnpe tglweeegdf nlekstrhkr eertflvgnm
      661 eikerrlfnl dvpesrrcyv kvrayrserf lqseqiqgvv isiinmepep gfssnprawg
      721 rfdsvvtgpn gacvpafcde qnpeaygayi lasmggeele avpsapklnp vaigvpqpyl
      781 nklnyrrtdh edsnikktaf sinmakpspn speenngpiy ayenlsecee aphsaahfrf
      841 yriegdrydy ntvpfseddl mswtddylaw wpkpmefrac yikvkingpq evnvrsrnmg
      901 gthprtigkl ygirdvrsir dpqqrdvsaa clefkcsgml fdqdrvdrtl vkvipqgncr
      961 rvsvnsmlhe ylvnhlpmat nndtseytml apldplghny giytvtdqdp riakeialgr
     1021 cfdgtsdgts rtmksdvgvg ltftcserst teqsifqsqr nlgqqsprdp grqsprdpgr
     1081 qsprdwsqqs prdpgrqspr dpgqqsprdp vwqsprdpgr qsprdwsqqs prdwsqqspr
     1141 dsgqqsilvl pgqspvyqrp pasrrnnqar ipmtgqrpty
//
LOCUS       XP_041325192            1940 aa            linear   VRT 06-MAY-2021
DEFINITION  treslin [Pyrgilauda ruficollis].
ACCESSION   XP_041325192
VERSION     XP_041325192.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469258.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1940
                     /product="treslin"
                     /calculated_mol_wt=212543
     Region          203..1003
                     /region_name="Treslin_N"
                     /note="Treslin N-terminus; pfam15292"
                     /db_xref="CDD:464618"
     CDS             1..1940
                     /gene="TICRR"
                     /coded_by="XM_041469258.1:45..5867"
                     /db_xref="GeneID:121354553"
ORIGIN      
        1 mscshsavfl ldtagparrq rlqrgalrll tllgcrfgls rlrwafrffd slggrggasr
       61 gggfrppgpr awqrfeeela erlgapaalp gpapraalth sglketlldf qwdrpeiasp
      121 akpprrsrrt glapreppea ppegfvnavf lfspcphsrr elrqfvsgnd apfsgeppsa
      181 relaekllpk svqellveqk islfwvdtad wsqliecpdh ggywtmfevi cqmggtilpa
      241 eslvhclshp gadaapgflg dsgfpepqav pwatllpldg tlnclfsrps lyrsvfpqqe
      301 gtlflsmpgg kkqescavtl eplamsqrql hcpvsivvkg sltgwslaqa ghflteswil
      361 qssqaeqgec srslfhqllr sllaeglhvi aevslsktwc pctavlspls gdaavltvlg
      421 pektagiqgc slegavveds sqdsathlpe ivnsvlskid msvedslasl geetpvpewv
      481 qrelshtggw hpsvleawyp asnacgassd lmesfrllqv pcanrkdgad qsdvelsesl
      541 selyqrkcse tsaaagagnk krrgvprtpv rqkmktmprs lqmlnvarln vkaqkfqpda
      601 vppavnekvp qklsakrlde kvegkakalk isidfqteee lqshltssyq kavaegipss
      661 vcaqnmimai krflkiqdak ekevacvgrv rnhllktskm lrqqhgsqke tkvrecrlqv
      721 flrlelclqc pslqsnaeem eqlleevtdm lrilcltedp ayltkfleei levymnsipk
      781 tlgdiyyglg tqippklasv lpsdffsdds mtldskspgl ppslssiltp savctesdql
      841 eelrtrsakk rrnnvlarhr smteapqnlr qieiprvakn pikkenshsy lapeksqqmp
      901 llqkeavqev tkvrrnlfne eilspskrsl kkmlrsqsvs aveglkykct segnkdhrkl
      961 ltkrvaetpl hkqvsrrllh kqikgrssdp gcdtgvvees pekaiceagl rrsprikqls
     1021 lnrtcsgafy sttqpsskns qhlhqgqgke scklqdvegl nqhsetppiq spkrfffgav
     1081 idmcspagkq spgrrrtrkd slhleeltsc qtprktprkf aqkpinsask lprrsprtvh
     1141 rtpqklektp grspaakqtv akclgkcfsp paqrvkspsv ltdsrrvhsl qvtaedwcaa
     1201 ltvsppckep gwqtpkregf tasvlpptds nptassppsa tqercctelq tprrslryls
     1261 kltspvsarr qiltkeiqvq sdqlsqapkr tpgkpedpgs klctsplste ipqlavrpep
     1321 lcssplcess tntvtscsvs htesdrepga skpssqktpg itgtslrsll htpkqakres
     1381 gsrgeslaca altenedshd sggncsvesl qlhqsqvten tsvleknkqm drvsqkspsr
     1441 edlenhlspk pfaggqehaq naerdcepsv keencsantc esflsdlqta sddleartvl
     1501 reeymevktp slkrrsrfal nasppvqksp payslrctad rrqreaaarm gepqlaakfs
     1561 speshgrlps aspptyevei emqasglpkl rikkigscss levqpeasas kprggespfs
     1621 dfamtwcskh pgklaaacvs psccrsfhst pgkgagqtyi cqsytptsca savtspfple
     1681 avvlqtpspk qkgkttpdai ndwprrkraa gstasvscgq sersaddqtr asagreramr
     1741 isehcsskvt ntlgefeleg icrlqdqasp sdsepraded samgtfglks rkrvftylsp
     1801 ekeenhsakr scpdrgsldl tgfstdegsr iksrtdsvlp ekpgacalkt leqhsclgdd
     1861 dvfllsgstp plksglsass lraltqspll spppaqrrrv qeeesdavqi tanqelspfh
     1921 imisrrprls rtysrkklls
//
LOCUS       XP_041325193             459 aa            linear   VRT 06-MAY-2021
DEFINITION  ammonium transporter Rh type C [Pyrgilauda ruficollis].
ACCESSION   XP_041325193
VERSION     XP_041325193.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469259.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..459
                     /product="ammonium transporter Rh type C"
                     /calculated_mol_wt=50349
     Region          61..419
                     /region_name="Ammonium_transp"
                     /note="Ammonium Transporter Family; cl03012"
                     /db_xref="CDD:445985"
     CDS             1..459
                     /gene="RHCG"
                     /coded_by="XM_041469259.1:35..1414"
                     /db_xref="GeneID:121354554"
ORIGIN      
        1 makntnmrwr lplvcllwev amivlfgvfv rfgaeadahw eeekremnlt sdiendfyfr
       61 ypsfqdvhvm ifvgfgflmt flkrygfgav gfnfllaafg iqwallmqgw fhsfkdgkil
      121 igvenlinad fcvgsvciaf gailgktspi qllvmtlfqv tlfsvneyil lnllhvkdag
      181 gsmtihtfga yfgltvtril yrpnleqskd kqgsvyhsdl famigtlylw mywpsfnsai
      241 sdhgdaqhrs aintycslaa cvlttmafss mlqkkgkldm vhiqnatlag gvavgtsaem
      301 mltpygsliv gsisgivstv gyvyftpfle srlhiqdtcg ihnlhampgl iggivgaita
      361 aaatedvygk egfikafdft gvyqtrtpsi qggfqaagiv vsllmafagg aivggilklp
      421 iwgdaaaenc fedgiywevp edeesdvyhm hnpdkpasp
//
LOCUS       XP_041325194             314 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325194
VERSION     XP_041325194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="tRNA-uridine aminocarboxypropyltransferase 1
                     isoform X1"
                     /calculated_mol_wt=35903
     Region          77..305
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..314
                     /gene="DTWD1"
                     /coded_by="XM_041469260.1:530..1474"
                     /db_xref="GeneID:121354555"
ORIGIN      
        1 mglliqltms lnsstllnee naqeakrnte clesllqtps liqdsplqql qlasqevlek
       61 akksgrskcp rcnssrmfyc ytcfvpvetv ptkeiptvkl plkidiikhp netdgkstav
      121 hakllapddv tiykypcipe yeekrheval ifpgpnsvsv kdiafhlqky tkkgvcssdd
      181 gcsrepllkq akieheeekn pnecilssrs egtrlkkiif idstwnqtnk iitderlqgl
      241 lqielktrkt cfwrhqkgkp dtylstieai yyflvdyhqe ilkesykgqy dnllfffsfm
      301 ytlikdakcc agke
//
LOCUS       XP_041325195             314 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325195
VERSION     XP_041325195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..314
                     /product="tRNA-uridine aminocarboxypropyltransferase 1
                     isoform X1"
                     /calculated_mol_wt=35903
     Region          77..305
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..314
                     /gene="DTWD1"
                     /coded_by="XM_041469261.1:274..1218"
                     /db_xref="GeneID:121354555"
ORIGIN      
        1 mglliqltms lnsstllnee naqeakrnte clesllqtps liqdsplqql qlasqevlek
       61 akksgrskcp rcnssrmfyc ytcfvpvetv ptkeiptvkl plkidiikhp netdgkstav
      121 hakllapddv tiykypcipe yeekrheval ifpgpnsvsv kdiafhlqky tkkgvcssdd
      181 gcsrepllkq akieheeekn pnecilssrs egtrlkkiif idstwnqtnk iitderlqgl
      241 lqielktrkt cfwrhqkgkp dtylstieai yyflvdyhqe ilkesykgqy dnllfffsfm
      301 ytlikdakcc agke
//
LOCUS       XP_041325196             309 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325196
VERSION     XP_041325196.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469262.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..309
                     /product="tRNA-uridine aminocarboxypropyltransferase 1
                     isoform X2"
                     /calculated_mol_wt=35379
     Region          72..300
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..309
                     /gene="DTWD1"
                     /coded_by="XM_041469262.1:468..1397"
                     /db_xref="GeneID:121354555"
ORIGIN      
        1 mltmslnsst llneenaqea krnteclesl lqtpsliqds plqqlqlasq evlekakksg
       61 rskcprcnss rmfycytcfv pvetvptkei ptvklplkid iikhpnetdg kstavhakll
      121 apddvtiyky pcipeyeekr hevalifpgp nsvsvkdiaf hlqkytkkgv cssddgcsre
      181 pllkqakieh eeeknpneci lssrsegtrl kkiifidstw nqtnkiitde rlqgllqiel
      241 ktrktcfwrh qkgkpdtyls tieaiyyflv dyhqeilkes ykgqydnllf ffsfmytlik
      301 dakccagke
//
LOCUS       XP_041325197             306 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325197
VERSION     XP_041325197.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469263.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="tRNA-uridine aminocarboxypropyltransferase 1
                     isoform X3"
                     /calculated_mol_wt=35033
     Region          69..297
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..306
                     /gene="DTWD1"
                     /coded_by="XM_041469263.1:162..1082"
                     /db_xref="GeneID:121354555"
ORIGIN      
        1 mslnsstlln eenaqeakrn teclesllqt psliqdsplq qlqlasqevl ekakksgrsk
       61 cprcnssrmf ycytcfvpve tvptkeiptv klplkidiik hpnetdgkst avhakllapd
      121 dvtiykypci peyeekrhev alifpgpnsv svkdiafhlq kytkkgvcss ddgcsrepll
      181 kqakieheee knpnecilss rsegtrlkki ifidstwnqt nkiitderlq gllqielktr
      241 ktcfwrhqkg kpdtylstie aiyyflvdyh qeilkesykg qydnllfffs fmytlikdak
      301 ccagke
//
LOCUS       XP_041325198             306 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-uridine aminocarboxypropyltransferase 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325198
VERSION     XP_041325198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="tRNA-uridine aminocarboxypropyltransferase 1
                     isoform X3"
                     /calculated_mol_wt=35033
     Region          69..297
                     /region_name="DTW"
                     /note="DTW domain; pfam03942"
                     /db_xref="CDD:461101"
     CDS             1..306
                     /gene="DTWD1"
                     /coded_by="XM_041469264.1:499..1419"
                     /db_xref="GeneID:121354555"
ORIGIN      
        1 mslnsstlln eenaqeakrn teclesllqt psliqdsplq qlqlasqevl ekakksgrsk
       61 cprcnssrmf ycytcfvpve tvptkeiptv klplkidiik hpnetdgkst avhakllapd
      121 dvtiykypci peyeekrhev alifpgpnsv svkdiafhlq kytkkgvcss ddgcsrepll
      181 kqakieheee knpnecilss rsegtrlkki ifidstwnqt nkiitderlq gllqielktr
      241 ktcfwrhqkg kpdtylstie aiyyflvdyh qeilkesykg qydnllfffs fmytlikdak
      301 ccagke
//
LOCUS       XP_041325199             482 aa            linear   VRT 06-MAY-2021
DEFINITION  N-acetylgalactosamine kinase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325199
VERSION     XP_041325199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469265.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="N-acetylgalactosamine kinase isoform X1"
                     /calculated_mol_wt=53010
     Region          15..479
                     /region_name="PLN02521"
                     /note="galactokinase"
                     /db_xref="CDD:215285"
     CDS             1..482
                     /gene="GALK2"
                     /coded_by="XM_041469265.1:69..1517"
                     /db_xref="GeneID:121354557"
ORIGIN      
        1 magdspsalp vqlveqprlq klkemfiskf gsapkfyara pgrvnligeh idycgyavlp
       61 maveqdilia vepvqtqvvq lantnssyld fstsvnniqi nktkpqwhny flcglkgiqe
      121 hfglnnptgm nclldgtipp ssglssssal vccaglvtlr angktlskve laeictkser
      181 yigtegggmd qsisflaeeg takliefspl ratdvrlpsg atfvianscv emnkaatshy
      241 nirvmecrla tkllskskgl ewrkmlrlhd vqtklgvsle emltiveevl hpepysaeei
      301 ckclgislee lhsqilsqnm qdvstfklyq rakhvyseaa rvlefqkicc eapanalqll
      361 gelmkqshis cremyecscp eldrlvdicl leksqsnllh glfllfpsrd qehrqfgaig
      421 srltgagwgg ctvsmvptdk lnaflknvkk ayyqtdgqrl avdnnslfat kpgrgalvfv
      481 ea
//
LOCUS       XP_041325200             458 aa            linear   VRT 06-MAY-2021
DEFINITION  N-acetylgalactosamine kinase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325200
VERSION     XP_041325200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469266.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..458
                     /product="N-acetylgalactosamine kinase isoform X2"
                     /calculated_mol_wt=50163
     Region          15..455
                     /region_name="PLN02521"
                     /note="galactokinase"
                     /db_xref="CDD:215285"
     CDS             1..458
                     /gene="GALK2"
                     /coded_by="XM_041469266.1:69..1445"
                     /db_xref="GeneID:121354557"
ORIGIN      
        1 magdspsalp vqlveqprlq klkemfiskf gsapkfyara pgrvnligeh idycgyavlp
       61 maveqdilia vepvqtqvvq lantnssyld fstsvnniqi nktkpqwhny flcglkgiqe
      121 hfglnnptgm nclldgtipp ssglssssal vccaglvtlr angktlskve laeictkser
      181 yigtegggmd qsisflaeeg takliefspl ratdvrlpsg atfvianscv emnkaatshy
      241 nirvmecrla tkllskskgl ewrkmlrlhd vqtklgvsle emltiveevl hpepysaeei
      301 ckclgislee lhsqilsqnm qdvstfklyq rakhvyseaa rvlefqkicc eapanalqll
      361 gelmkqshis cremyecscp eldrlvdicl qfgaigsrlt gagwggctvs mvptdklnaf
      421 lknvkkayyq tdgqrlavdn nslfatkpgr galvfvea
//
LOCUS       XP_041325201             431 aa            linear   VRT 06-MAY-2021
DEFINITION  N-acetylgalactosamine kinase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325201
VERSION     XP_041325201.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469267.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..431
                     /product="N-acetylgalactosamine kinase isoform X3"
                     /calculated_mol_wt=47403
     Region          15..428
                     /region_name="PLN02521"
                     /note="galactokinase"
                     /db_xref="CDD:215285"
     CDS             1..431
                     /gene="GALK2"
                     /coded_by="XM_041469267.1:69..1364"
                     /db_xref="GeneID:121354557"
ORIGIN      
        1 magdspsalp vqlveqprlq klkemfiskf gsapkfyara pgrvnligeh idycgyavlp
       61 maveqdilia vepvqtqvvq lantnssyld fstsvnniqi nktkpqwhny flcglkgiqe
      121 hfglnnptgm nclldgtipp ssglssssal vccaglvtlr angktlskve laeictkser
      181 yigtegggmd qsisflaeeg tllskskgle wrkmlrlhdv qtklgvslee mltiveevlh
      241 pepysaeeic kclgisleel hsqilsqnmq dvstfklyqr akhvyseaar vlefqkicce
      301 apanalqllg elmkqshisc remyecscpe ldrlvdicll eksqsnllhg lfllfpsrdq
      361 ehrqfgaigs rltgagwggc tvsmvptdkl naflknvkka yyqtdgqrla vdnnslfatk
      421 pgrgalvfve a
//
LOCUS       XP_041325203             641 aa            linear   VRT 06-MAY-2021
DEFINITION  crooked neck-like protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325203
VERSION     XP_041325203.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469269.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..641
                     /product="crooked neck-like protein 1 isoform X1"
                     /calculated_mol_wt=74136
     Region          <299..498
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          366..394
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(367,370..371,374..375,377,400,403..404,407..408,
                     410..411,434,437..438,441..442,445)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          399..428
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          433..461
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          469..497
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..641
                     /gene="LOC121354558"
                     /coded_by="XM_041469269.1:15..1940"
                     /db_xref="GeneID:121354558"
ORIGIN      
        1 maaegggraa agrlylvdti agdpevlqtd aetyyekllk kslstpdifs ipgggevkle
       61 dscvcfvply rnnptcklll ltdpkdketv lavylsqrww pvedvvktad pardglilvq
      121 tfgerivlfv lnciifgmle gssandaffl phsateraki lwrngeaaaf ysvkmkgslc
      181 dgttsqcyll pvldtifvqr kyrrgglgmk mlhdfcqsfl aedalgiscp isaamyqvcq
      241 kflqahpeeq krlweveapg dwsqrlniwl kiqmesspsg kaevgscmek tpttkprqld
      301 hmnkevykra ianmppiqek rhwkryiylw isyalyeele akdaertrqv yqaclellph
      361 kkftfakmwl lyaqfeirqk nlplarralg tsigkcpknk lfkgyielel qlrefdrcrk
      421 lyekflefap encmswikfa eletilgdid caraiyelai sqpwldmpev lwksytdfem
      481 eqeecerars lyrrllqrtq rgkvwislar fellagqeer lqrcqqiyqe ankamcscee
      541 keervmlles wrsfedefgt datkeridkl mpekikkrrk lqakdgsdag weeycdyifp
      601 edtacqpnlk llamaklwkk qqlesedatm dpnkdidesq t
//
LOCUS       XP_041325204             638 aa            linear   VRT 06-MAY-2021
DEFINITION  crooked neck-like protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325204
VERSION     XP_041325204.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469270.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..638
                     /product="crooked neck-like protein 1 isoform X2"
                     /calculated_mol_wt=74127
     Region          <296..495
                     /region_name="LapB"
                     /note="Lipopolysaccharide biosynthesis regulator
                     YciM/LapB, contains six TPR domains and a C-terminal
                     metal-binding domain [Cell wall/membrane/envelope
                     biogenesis]; COG2956"
                     /db_xref="CDD:442196"
     Region          363..391
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(364,367..368,371..372,374,397,400..401,404..405,
                     407..408,431,434..435,438..439,442)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          396..425
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          430..458
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          466..494
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..638
                     /gene="LOC121354558"
                     /coded_by="XM_041469270.1:106..2022"
                     /db_xref="GeneID:121354558"
ORIGIN      
        1 mpgcwkckgr lylvdtiagd pevlqtdaet yyekllkksl stpdifsipg ggevkledsc
       61 vcfvplyrnn ptcklllltd pkdketvlav ylsqrwwpve dvvktadpar dglilvqtfg
      121 erivlfvlnc iifgmlegss andafflphs aterakilwr ngeaaafysv kmkgslcdgt
      181 tsqcyllpvl dtifvqrkyr rgglgmkmlh dfcqsflaed algiscpisa amyqvcqkfl
      241 qahpeeqkrl weveapgdws qrlniwlkiq messpsgkae vgscmektpt tkprqldhmn
      301 kevykraian mppiqekrhw kryiylwisy alyeeleakd aertrqvyqa clellphkkf
      361 tfakmwllya qfeirqknlp larralgtsi gkcpknklfk gyielelqlr efdrcrklye
      421 kflefapenc mswikfaele tilgdidcar aiyelaisqp wldmpevlwk sytdfemeqe
      481 ecerarslyr rllqrtqrgk vwislarfel lagqeerlqr cqqiyqeank amcsceekee
      541 rvmlleswrs fedefgtdat keridklmpe kikkrrklqa kdgsdagwee ycdyifpedt
      601 acqpnlklla maklwkkqql esedatmdpn kdidesqt
//
LOCUS       XP_041325205             377 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM169B-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325205
VERSION     XP_041325205.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469271.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..377
                     /product="protein FAM169B-like isoform X3"
                     /calculated_mol_wt=41364
     CDS             1..377
                     /gene="LOC121354558"
                     /coded_by="XM_041469271.1:15..1148"
                     /db_xref="GeneID:121354558"
ORIGIN      
        1 maaegggraa agrlylvdti agdpevlqtd aetyyekllk kslstpdifs ipgggevkle
       61 dscvcfvply rnnptcklll ltdpkdketv lavylsqrww pvedvvktad pardglilvq
      121 tfgerivlfv lnciifgmle gssandaffl phsateraki lwrngeaaaf ysvkmkgslc
      181 dgttsqcyll pvldtifvqr kyrrgglgmk mlhdfcqsfl aedalgiscp isaamyqvcq
      241 kflqahpeeq krlweveapg dwsqrlniwl kiqmesspsg kaevgscmek tpttkprqld
      301 hmnkgvdcfp gvgqvagdam eekddttaag tlnsqgpeee nleqsagdaq qrkglrkreg
      361 sgdldgdkat kqfkttp
//
LOCUS       XP_041325206             211 aa            linear   VRT 06-MAY-2021
DEFINITION  pyroglutamyl-peptidase 1-like protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325206
VERSION     XP_041325206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469272.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..211
                     /product="pyroglutamyl-peptidase 1-like protein isoform
                     X1"
                     /calculated_mol_wt=23516
     Region          7..192
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cd00501"
                     /db_xref="CDD:238279"
     Site            order(13,16,49,146..148)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:238279"
     Site            order(79..81,131,134..138,172..173,175,181,183)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(86,148,167)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(87..88,92,94,96,105..106,115..118,124,141..142,145)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            183
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..211
                     /gene="PGPEP1L"
                     /coded_by="XM_041469272.1:101..736"
                     /db_xref="GeneID:121354559"
ORIGIN      
        1 mdsnsntvvv tgfgpfrqyl vnssweavke lskrglgeni dlqimqlpvv yqkakeqvck
       61 iwttlqpllt vhvglasstt aliileqcgk nkgyqerdac gfhpedaccv ldgpekiest
      121 inmktlwkni svegidiils rdagryicdy tyytslyygn graafihvpp lsesvtaefl
      181 gkalqtiila mleqcgeqre rdhrgekmmi s
//
LOCUS       XP_041325207             211 aa            linear   VRT 06-MAY-2021
DEFINITION  pyroglutamyl-peptidase 1-like protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325207
VERSION     XP_041325207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469273.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..211
                     /product="pyroglutamyl-peptidase 1-like protein isoform
                     X2"
                     /calculated_mol_wt=23700
     Region          12..192
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cd00501"
                     /db_xref="CDD:238279"
     Site            order(13,16,49,146..148)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:238279"
     Site            order(79..81,131,134..138,172..173,175,181,183)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(86,148,167)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(87..88,92,94,96,105..106,115..118,124,141..142,145)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            183
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..211
                     /gene="PGPEP1L"
                     /coded_by="XM_041469273.1:183..818"
                     /db_xref="GeneID:121354559"
ORIGIN      
        1 mswmgvqera rgfgpfrqyl vnssweavke lskrglgeni dlqimqlpvv yqkakeqvck
       61 iwttlqpllt vhvglasstt aliileqcgk nkgyqerdac gfhpedaccv ldgpekiest
      121 inmktlwkni svegidiils rdagryicdy tyytslyygn graafihvpp lsesvtaefl
      181 gkalqtiila mleqcgeqre rdhrgekmmi s
//
LOCUS       XP_041325208             172 aa            linear   VRT 06-MAY-2021
DEFINITION  pyroglutamyl-peptidase 1-like protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325208
VERSION     XP_041325208.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469274.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="pyroglutamyl-peptidase 1-like protein isoform
                     X3"
                     /calculated_mol_wt=19022
     Region          7..153
                     /region_name="Peptidase_C15"
                     /note="Pyroglutamyl peptidase (PGP) type I, also known as
                     pyrrolidone carboxyl peptidase (pcp) type I: Enzymes
                     responsible for cleaving pyroglutamate (pGlu) from the
                     N-terminal end of specialized proteins. The N-terminal
                     pGlu protects these proteins from...; cd00501"
                     /db_xref="CDD:238279"
     Site            order(13,16,107..109)
                     /site_type="other"
                     /note="putative substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:238279"
     Site            order(40..42,92,95..99,133..134,136,142,144)
                     /site_type="active"
                     /note="AC domain interface [active]"
                     /db_xref="CDD:238279"
     Site            order(47,109,128)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238279"
     Site            order(48..49,53,55,57,66..67,76..79,85,102..103,106)
                     /site_type="active"
                     /note="AB domain interface [active]"
                     /db_xref="CDD:238279"
     Site            144
                     /site_type="active"
                     /note="interchain disulfide [active]"
                     /db_xref="CDD:238279"
     CDS             1..172
                     /gene="PGPEP1L"
                     /coded_by="XM_041469274.1:101..619"
                     /db_xref="GeneID:121354559"
ORIGIN      
        1 mdsnsntvvv tgfgpfrqyl vnssweavkl tvhvglasst taliileqcg knkgyqerda
       61 cgfhpedacc vldgpekies tinmktlwkn isvegidiil srdagryicd ytyytslyyg
      121 ngraafihvp plsesvtaef lgkalqtiil amleqcgeqr erdhrgekmm is
//
LOCUS       XP_041325209             374 aa            linear   VRT 06-MAY-2021
DEFINITION  apoptosis-enhancing nuclease-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325209
VERSION     XP_041325209.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469275.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="apoptosis-enhancing nuclease-like isoform X1"
                     /calculated_mol_wt=40891
     Region          171..327
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(174..177,253..254,256..258,318)
                     /site_type="active"
                     /db_xref="CDD:99852"
     Site            order(174,176,258,318)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99852"
     Site            order(175..177,253..254,256..257,318)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99852"
     CDS             1..374
                     /gene="LOC121354561"
                     /coded_by="XM_041469275.1:14..1138"
                     /db_xref="GeneID:121354561"
ORIGIN      
        1 mcarrlpgrt rvsragsagm ppgkgqmtal lpapkvsvpa lqgthggcaq apkgasspqg
       61 rskkksrkhq rflarravle qkgllsphrh pgrqtpeagl eghaelteer attaprcdnv
      121 pkpkqtvsss lspsaspdsi arhhsvllsq gkgsscrvrt sslvlrpgky vaidcemvgt
      181 gpqgklsela rcsvvnyegd viydkyvrpe lpivdyrtrw sgitkqhmkn aipfkaaqae
      241 ilkilkdkiv vghaihndfq alkyfhpkdr trdtsqspal kkraglpira nvslknlary
      301 llhkkiqmgc kghssvedaq tamelyrlve vqwekelahs lpprppspvt dpaadssqyl
      361 qdqywptelm assl
//
LOCUS       XP_041325210             373 aa            linear   VRT 06-MAY-2021
DEFINITION  apoptosis-enhancing nuclease-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325210
VERSION     XP_041325210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..373
                     /product="apoptosis-enhancing nuclease-like isoform X2"
                     /calculated_mol_wt=40820
     Region          170..326
                     /region_name="DnaQ_like_exo"
                     /note="DnaQ-like (or DEDD) 3'-5' exonuclease domain
                     superfamily; cl10012"
                     /db_xref="CDD:447876"
     Site            order(173..176,252..253,255..257,317)
                     /site_type="active"
                     /db_xref="CDD:99852"
     Site            order(173,175,257,317)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:99852"
     Site            order(174..176,252..253,255..256,317)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:99852"
     CDS             1..373
                     /gene="LOC121354561"
                     /coded_by="XM_041469276.1:13..1134"
                     /db_xref="GeneID:121354561"
ORIGIN      
        1 mcarrlpgrt rvsragsgmp pgkgqmtall papkvsvpal qgthggcaqa pkgasspqgr
       61 skkksrkhqr flarravleq kgllsphrhp grqtpeagle ghaelteera ttaprcdnvp
      121 kpkqtvsssl spsaspdsia rhhsvllsqg kgsscrvrts slvlrpgkyv aidcemvgtg
      181 pqgklselar csvvnyegdv iydkyvrpel pivdyrtrws gitkqhmkna ipfkaaqaei
      241 lkilkdkivv ghaihndfqa lkyfhpkdrt rdtsqspalk kraglpiran vslknlaryl
      301 lhkkiqmgck ghssvedaqt amelyrlvev qwekelahsl pprppspvtd paadssqylq
      361 dqywptelma ssl
//
LOCUS       XP_041325211            1102 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit beta-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325211
VERSION     XP_041325211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469277.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1102
                     /product="AP-3 complex subunit beta-2 isoform X1"
                     /calculated_mol_wt=122103
     Region          34..588
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          111..139
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          145..173
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          182..208
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          821..967
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..1102
                     /gene="AP3B2"
                     /coded_by="XM_041469277.1:77..3385"
                     /db_xref="GeneID:121354563"
ORIGIN      
        1 maaspaygee kggssslgep eyghdpasgg ifssdykrhd dlkemldsnk dslkleamkr
       61 ivamiargkn asdlfpavvk nvacknievk klvyvylvry aeeqqdlall sistfqrglk
      121 dpnqlirasa lrvlssirvp iivpimmlai keaasdmspy vrktaahaip klysldsdqk
      181 dqlieviekl ladkttlvag svvmafeevc peridlihkn yrklcnllid veewgqvvii
      241 nmltryartq flspnqnqes lleentekaf ygseeedakd akaeaaslak rkpyvmdpdh
      301 rlllrntkpl lqsrnaavvm avaqlyfhla pkaevgviak alvrllrshs evqyvvlqnv
      361 atmsikrrgm fepylksfyi rstdptqiki lklevltnla netnistilr efqtyirsmd
      421 kdfvaatiqa igrcatnigk vrdtclnglv qllsnrdelv vaesvvvikk llqmqpaqhs
      481 eiikhvaklt dniqvpmara silwligeyc ehvpkiapdv lrkmaksftn eedivklqvi
      541 nlaaklyltn skqsklltqy vlnlakydqn ydirdrarfi rqlivpteks galnkyakkl
      601 flaqkpapil essfkdrdhf qlgslshlln akavgyqelp dwpdeapdps vrnvevpewt
      661 kctsrekrke kvekpfysds egesgptesa dsepesgsee ngsssssgss ssgteeedee
      721 eeeedsgeqs edkeeeeeek rpkrkdkegs hkavlgtags pseeeeeeeg akkakkkapq
      781 grkghaetss eastsessss gsdsgseaea kqrkppsska sskeislldl ddftppppqp
      841 ipsssiists lvtdlegltl tdtsltptll spafsavkty ellhrmageg laveycfsrr
      901 pfpgdphmva vqiqisnntd tevknlrvne pkplsgmriq efpeiehlap gdtatvvmgi
      961 dfcdstqaan fqlcthtrqf yvsiqppvge lmapvfmsen efkkeqgklm gmseiteklt
     1021 lpekcrsdht ivqqvtsaan vgrvpcgasn eyrfaaktvt sgslvlitle rregsmaqlt
     1081 insekmvigt mlvkdiiqal tq
//
LOCUS       XP_041325212            1101 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit beta-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325212
VERSION     XP_041325212.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469278.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1101
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1101
                     /product="AP-3 complex subunit beta-2 isoform X2"
                     /calculated_mol_wt=121975
     Region          34..587
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          111..139
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          145..173
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          182..208
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          820..966
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..1101
                     /gene="AP3B2"
                     /coded_by="XM_041469278.1:77..3382"
                     /db_xref="GeneID:121354563"
ORIGIN      
        1 maaspaygee kggssslgep eyghdpasgg ifssdykrhd dlkemldsnk dslkleamkr
       61 ivamiargkn asdlfpavvk nvacknievk klvyvylvry aeeqqdlall sistfqrglk
      121 dpnqlirasa lrvlssirvp iivpimmlai keaasdmspy vrktaahaip klysldsdqk
      181 dqlieviekl ladkttlvag svvmafeevc peridlihkn yrklcnllid veewgqvvii
      241 nmltryartq flspnqnesl leentekafy gseeedakda kaeaaslakr kpyvmdpdhr
      301 lllrntkpll qsrnaavvma vaqlyfhlap kaevgviaka lvrllrshse vqyvvlqnva
      361 tmsikrrgmf epylksfyir stdptqikil klevltnlan etnistilre fqtyirsmdk
      421 dfvaatiqai grcatnigkv rdtclnglvq llsnrdelvv aesvvvikkl lqmqpaqhse
      481 iikhvakltd niqvpmaras ilwligeyce hvpkiapdvl rkmaksftne edivklqvin
      541 laaklyltns kqsklltqyv lnlakydqny dirdrarfir qlivpteksg alnkyakklf
      601 laqkpapile ssfkdrdhfq lgslshllna kavgyqelpd wpdeapdpsv rnvevpewtk
      661 ctsrekrkek vekpfysdse gesgptesad sepesgseen gsssssgsss sgteeedeee
      721 eeedsgeqse dkeeeeeekr pkrkdkegsh kavlgtagsp seeeeeeega kkakkkapqg
      781 rkghaetsse astsessssg sdsgseaeak qrkppsskas skeislldld dftppppqpi
      841 psssiistsl vtdlegltlt dtsltptlls pafsavktye llhrmagegl aveycfsrrp
      901 fpgdphmvav qiqisnntdt evknlrvnep kplsgmriqe fpeiehlapg dtatvvmgid
      961 fcdstqaanf qlcthtrqfy vsiqppvgel mapvfmsene fkkeqgklmg mseitekltl
     1021 pekcrsdhti vqqvtsaanv grvpcgasne yrfaaktvts gslvlitler regsmaqlti
     1081 nsekmvigtm lvkdiiqalt q
//
LOCUS       XP_041325213             963 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit beta-2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325213
VERSION     XP_041325213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..963
                     /product="AP-3 complex subunit beta-2 isoform X3"
                     /calculated_mol_wt=107093
     Region          34..588
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          111..139
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          145..173
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          182..208
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          821..945
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..963
                     /gene="AP3B2"
                     /coded_by="XM_041469279.1:1..2892"
                     /db_xref="GeneID:121354563"
ORIGIN      
        1 maaspaygee kggssslgep eyghdpasgg ifssdykrhd dlkemldsnk dslkleamkr
       61 ivamiargkn asdlfpavvk nvacknievk klvyvylvry aeeqqdlall sistfqrglk
      121 dpnqlirasa lrvlssirvp iivpimmlai keaasdmspy vrktaahaip klysldsdqk
      181 dqlieviekl ladkttlvag svvmafeevc peridlihkn yrklcnllid veewgqvvii
      241 nmltryartq flspnqnqes lleentekaf ygseeedakd akaeaaslak rkpyvmdpdh
      301 rlllrntkpl lqsrnaavvm avaqlyfhla pkaevgviak alvrllrshs evqyvvlqnv
      361 atmsikrrgm fepylksfyi rstdptqiki lklevltnla netnistilr efqtyirsmd
      421 kdfvaatiqa igrcatnigk vrdtclnglv qllsnrdelv vaesvvvikk llqmqpaqhs
      481 eiikhvaklt dniqvpmara silwligeyc ehvpkiapdv lrkmaksftn eedivklqvi
      541 nlaaklyltn skqsklltqy vlnlakydqn ydirdrarfi rqlivpteks galnkyakkl
      601 flaqkpapil essfkdrdhf qlgslshlln akavgyqelp dwpdeapdps vrnvevpewt
      661 kctsrekrke kvekpfysds egesgptesa dsepesgsee ngsssssgss ssgteeedee
      721 eeeedsgeqs edkeeeeeek rpkrkdkegs hkavlgtags pseeeeeeeg akkakkkapq
      781 grkghaetss eastsessss gsdsgseaea kqrkppsska sskeislldl ddftppppqp
      841 ipsssiists lvtdlegltl tdtsltptll spafsavkty ellhrmageg laveycfsrr
      901 pfpgdphmva vqiqisnntd tevknlrvne pkplsgmriq efpeivaalw fqstwrqgtq
      961 plw
//
LOCUS       XP_041325214             961 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit beta-2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325214
VERSION     XP_041325214.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469280.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..961
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..961
                     /product="AP-3 complex subunit beta-2 isoform X4"
                     /calculated_mol_wt=106923
     Region          34..588
                     /region_name="Adaptin_N"
                     /note="Adaptin N terminal region; pfam01602"
                     /db_xref="CDD:396262"
     Region          111..139
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          145..173
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          182..208
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          821..946
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..961
                     /gene="AP3B2"
                     /coded_by="XM_041469280.1:1..2886"
                     /db_xref="GeneID:121354563"
ORIGIN      
        1 maaspaygee kggssslgep eyghdpasgg ifssdykrhd dlkemldsnk dslkleamkr
       61 ivamiargkn asdlfpavvk nvacknievk klvyvylvry aeeqqdlall sistfqrglk
      121 dpnqlirasa lrvlssirvp iivpimmlai keaasdmspy vrktaahaip klysldsdqk
      181 dqlieviekl ladkttlvag svvmafeevc peridlihkn yrklcnllid veewgqvvii
      241 nmltryartq flspnqnqes lleentekaf ygseeedakd akaeaaslak rkpyvmdpdh
      301 rlllrntkpl lqsrnaavvm avaqlyfhla pkaevgviak alvrllrshs evqyvvlqnv
      361 atmsikrrgm fepylksfyi rstdptqiki lklevltnla netnistilr efqtyirsmd
      421 kdfvaatiqa igrcatnigk vrdtclnglv qllsnrdelv vaesvvvikk llqmqpaqhs
      481 eiikhvaklt dniqvpmara silwligeyc ehvpkiapdv lrkmaksftn eedivklqvi
      541 nlaaklyltn skqsklltqy vlnlakydqn ydirdrarfi rqlivpteks galnkyakkl
      601 flaqkpapil essfkdrdhf qlgslshlln akavgyqelp dwpdeapdps vrnvevpewt
      661 kctsrekrke kvekpfysds egesgptesa dsepesgsee ngsssssgss ssgteeedee
      721 eeeedsgeqs edkeeeeeek rpkrkdkegs hkavlgtags pseeeeeeeg akkakkkapq
      781 grkghaetss eastsessss gsdsgseaea kqrkppsska sskeislldl ddftppppqp
      841 ipsssiists lvtdlegltl tdtsltptll spafsavkty ellhrmageg laveycfsrr
      901 pfpgdphmva vqiqisnntd tevknlrvne pkplsgmriq efpeialwfq stwrqgtqpl
      961 w
//
LOCUS       XP_041325216             503 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit beta-2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325216
VERSION     XP_041325216.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469282.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..503
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..503
                     /product="AP-3 complex subunit beta-2 isoform X5"
                     /calculated_mol_wt=54480
     Region          222..368
                     /region_name="AP3B1_C"
                     /note="Clathrin-adaptor complex-3 beta-1 subunit
                     C-terminal; pfam14796"
                     /db_xref="CDD:464319"
     CDS             1..503
                     /gene="AP3B2"
                     /coded_by="XM_041469282.1:160..1671"
                     /db_xref="GeneID:121354563"
ORIGIN      
        1 mssiwpsttr ittsvtglas sasslcplrr vepsintprs sswpknrlps wslpskvpew
       61 tkctsrekrk ekvekpfysd segesgptes adsepesgse engsssssgs sssgteeede
      121 eeeeedsgeq sedkeeeeee krpkrkdkeg shkavlgtag spseeeeeee gakkakkkap
      181 qgrkghaets seastsesss sgsdsgseae akqrkppssk asskeislld lddftppppq
      241 pipsssiist slvtdleglt ltdtsltptl lspafsavkt yellhrmage glaveycfsr
      301 rpfpgdphmv avqiqisnnt dtevknlrvn epkplsgmri qefpeiehla pgdtatvvmg
      361 idfcdstqaa nfqlcthtrq fyvsiqppvg elmapvfmse nefkkeqgkl mgmseitekl
      421 tlpekcrsdh tivqqvtsaa nvgrvpcgas neyrfaaktv tsgslvlitl erregsmaql
      481 tinsekmvig tmlvkdiiqa ltq
//
LOCUS       XP_041325217             145 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit beta-2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325217
VERSION     XP_041325217.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469283.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..145
                     /product="AP-3 complex subunit beta-2 isoform X6"
                     /calculated_mol_wt=15863
     CDS             1..145
                     /gene="AP3B2"
                     /coded_by="XM_041469283.1:176..613"
                     /db_xref="GeneID:121354563"
ORIGIN      
        1 mgidfcdstq aanfqlctht rqfyvsiqpp vgelmapvfm senefkkeqg klmgmseite
       61 kltlpekcrs dhtivqqvts aanvgrvpcg asneyrfaak tvtsgslvli tlerregsma
      121 qltinsekmv igtmlvkdii qaltq
//
LOCUS       XP_041325218             145 aa            linear   VRT 06-MAY-2021
DEFINITION  AP-3 complex subunit beta-2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325218
VERSION     XP_041325218.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469284.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..145
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..145
                     /product="AP-3 complex subunit beta-2 isoform X6"
                     /calculated_mol_wt=15863
     CDS             1..145
                     /gene="AP3B2"
                     /coded_by="XM_041469284.1:169..606"
                     /db_xref="GeneID:121354563"
ORIGIN      
        1 mgidfcdstq aanfqlctht rqfyvsiqpp vgelmapvfm senefkkeqg klmgmseite
       61 kltlpekcrs dhtivqqvts aanvgrvpcg asneyrfaak tvtsgslvli tlerregsma
      121 qltinsekmv igtmlvkdii qaltq
//
LOCUS       XP_041325219            1371 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325219
VERSION     XP_041325219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469285.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1371
                     /product="kinesin-like protein KIF7 isoform X1"
                     /calculated_mol_wt=155835
     Region          16..347
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(16,85..92,197..198,249..254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     Region          394..>1056
                     /region_name="DUF3584"
                     /note="Protein of unknown function (DUF3584); pfam12128"
                     /db_xref="CDD:432349"
     Region          <732..>1293
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1371
                     /gene="KIF7"
                     /coded_by="XM_041469285.1:548..4663"
                     /db_xref="GeneID:121354564"
ORIGIN      
        1 maaeaavvrv avrvrpllpr ealrghrpcl rsdaatgeva lgrrrfrfaa vlpeaagqaa
       61 vyracvqpll raffrgfnat vfaygqtgsg ktytigeasv asinedeqgi ipramaetfr
      121 lidendlidy tvrvsylevy keefrdllqv dtaskdiqir eddkgnivlc gvkesevegl
      181 devlsllemg ntakhtgath inrqssrsht iftvtmeqrr gagrlplhhh apavpaagqv
      241 lvskfhfvdl agserivktg ntgerlkesi qincgllalg nvisalgdpr rktthipyrd
      301 skitrilkds lggnaqtvmi acvspsssdf deslntlnya nraqniqnra vvncrketeh
      361 ieelhlqikn lqkaleqrqr setrtihrsg sakrgapdat arllaecahy rtctdaayrl
      421 ltelqedsnl tveqilrvke wlcavesers eltsagldsg iestsmddqg peaqgskgak
      481 gqvstekkce sikdeqvakl qrqverleee nrdflaaled ameqyklqsd klqeqqdkis
      541 elhvrlemam pnlcvpglle nlhlvtasqr phtapldaap shgfggvpsg llpeqsgral
      601 ckkklssssl qkeelagwhp nhaqhptgdp evrevvlrre lsqdsekpse lssgeeveew
      661 eqkqslsqcr ngiqnlskke ifklgeepsg gnahsiqeeq lelskevyek resllgswkr
      721 lpgkdsewrl vqaqqkirel ainirmkeel itelvktgkd aqalnkqysq kiseleqeae
      781 qvraelsdsq kqlqelegke pwdpgekrkl qeyrtrlaav rskaqvlcrk kqaterlvsl
      841 saqsekrvqe lerniqlmrr qqgqlqrrlr eeseqkrrle tevnkgqhrv kelelkheqh
      901 qkilriktee iaafqrkrrs gsngsvisle qqqkieeqkk wldmemdkvl eqrqaldele
      961 delrkreaiv akkeallqek ngleskrlrs sqaltddivr vssrlehlek elsekngqlr
     1021 hgsahdqqqi rqeinslrqe kdqllkqrle ldnklrqgtl lspeeerilf qldeaieald
     1081 aaieyknesi tcrqrvlras asllsqcemn lmaklsylss setrallcky fdkvvtlred
     1141 qhrqhiafse lemqleeqqq lvywleaave rqrlemdrql tlqqkeheqn mqlllqqsre
     1201 hmdeglassk lqyeariqvl ekelsrymwa nqelnqrlsn mnlhpgqnkg mernihgdra
     1261 apelgtceef slreqqpvpp aeesprarde srdlvhaplp stwrrsslps dspgeprqrd
     1321 aehragqphe plaprslaaa pkarrelrra slsvspvpyh pamidvrknp l
//
LOCUS       XP_041325220            1302 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325220
VERSION     XP_041325220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1302
                     /product="kinesin-like protein KIF7 isoform X2"
                     /calculated_mol_wt=147930
     Region          16..347
                     /region_name="Motor_domain"
                     /note="Myosin and Kinesin motor domain; cl22853"
                     /db_xref="CDD:473979"
     Site            order(16,85..92,197..198,249..254)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276814"
     Region          <424..>550
                     /region_name="PRK09039"
                     /note="peptidoglycan -binding protein"
                     /db_xref="CDD:181619"
     Region          <732..>1056
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <929..1219
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1302
                     /gene="KIF7"
                     /coded_by="XM_041469286.1:548..4456"
                     /db_xref="GeneID:121354564"
ORIGIN      
        1 maaeaavvrv avrvrpllpr ealrghrpcl rsdaatgeva lgrrrfrfaa vlpeaagqaa
       61 vyracvqpll raffrgfnat vfaygqtgsg ktytigeasv asinedeqgi ipramaetfr
      121 lidendlidy tvrvsylevy keefrdllqv dtaskdiqir eddkgnivlc gvkesevegl
      181 devlsllemg ntakhtgath inrqssrsht iftvtmeqrr gagrlplhhh apavpaagqv
      241 lvskfhfvdl agserivktg ntgerlkesi qincgllalg nvisalgdpr rktthipyrd
      301 skitrilkds lggnaqtvmi acvspsssdf deslntlnya nraqniqnra vvncrketeh
      361 ieelhlqikn lqkaleqrqr setrtihrsg sakrgapdat arllaecahy rtctdaayrl
      421 ltelqedsnl tveqilrvke wlcavesers eltsagldsg iestsmddqg peaqgskgak
      481 gqvstekkce sikdeqvakl qrqverleee nrdflaaled ameqyklqsd klqeqqdkis
      541 elhvrlemam pnlcvpglle nlhlvtasqr phtapldaap shgfggvpsg llpeqsgral
      601 ckkklssssl qkeelagwhp nhaqhptgdp evrevvlrre lsqdsekpse lssgeeveew
      661 eqkqslsqcr ngiqnlskke ifklgeepsg gnahsiqeeq lelskevyek resllgswkr
      721 lpgkdsewrl vqaqqkirel ainirmkeel itelvktgkd aqalnkqysq kiseleqeae
      781 qvraelsdsq kqlqelegke pwdpgekrkl qeyrtrlaav rskaqvlcrk kqaterlvsl
      841 saqsekrvqe lerniqlmrr qqgqlqrrlr eeseqkrrle tevnkgqhrv kelelkheqh
      901 qkilriktee iaafqrkrrs gsngsvisle qqqkieeqkk wldmemdkvl eqrqaldele
      961 delrkreaiv akkeallqek ngleskrlrs sqaltddivr vssrlehlek elsekngqlr
     1021 hgsahdqqqi rqeinslrqe kdqllkqrle ldnklrqgtl lspevvtlre dqhrqhiafs
     1081 elemqleeqq qlvywleaav erqrlemdrq ltlqqkeheq nmqlllqqsr ehmdeglass
     1141 klqyeariqv lekelsrymw anqelnqrls nmnlhpgqnk gmernihgdr aapelgtcee
     1201 fslreqqpvp paeesprard esrdlvhapl pstwrrsslp sdspgeprqr daehragqph
     1261 eplaprslaa apkarrelrr aslsvspvpy hpamidvrkn pl
//
LOCUS       XP_041325221             268 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ras-related and estrogen-regulated growth
            inhibitor-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325221
VERSION     XP_041325221.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469287.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..268
                     /product="LOW QUALITY PROTEIN: ras-related and
                     estrogen-regulated growth inhibitor-like protein"
                     /calculated_mol_wt=29165
     Region          71..236
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            76..83
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(78..84,125,187..188,190,217..219)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            103..105
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            122..125
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(124..125,144..145)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            187..190
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            217..219
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..268
                     /gene="LOC121354565"
                     /coded_by="XM_041469287.1:181..987"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 2 codons"
                     /db_xref="GeneID:121354565"
ORIGIN      
        1 mglvgppgav gsagqsacra elytrlgpce glgrarmglr lplrrstsft pdhpalmevp
       61 gptaplkmea nvlvmgadnv gksaltvrfl trrfigeygd mefiyshnlt vdgreillhi
      121 wdvpssqeqa edgsseekri qwadsfvlvy sicdrasfni lplkiqfika akegqsqekv
      181 pivivgnkrd lhhqrvvsse egrllalsld cgfyevsaae ayhgalmvfh glaklipdtk
      241 lslkkgtgir givktmsavf grkrtdsl
//
LOCUS       XP_041325222             300 aa            linear   VRT 06-MAY-2021
DEFINITION  cilia- and flagella-associated protein 161 [Pyrgilauda ruficollis].
ACCESSION   XP_041325222
VERSION     XP_041325222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="cilia- and flagella-associated protein 161"
                     /calculated_mol_wt=33902
     CDS             1..300
                     /gene="CFAP161"
                     /coded_by="XM_041469288.1:1..903"
                     /db_xref="GeneID:121354566"
ORIGIN      
        1 masyrlgvri gnwledeiaq qdllrdfirk rekgqllvqr larlqesifk kvelsvssdg
       61 fvhfgdtvll mnpdckssdl ggtseerdpe mrgdvtlavd meevslysde plqisrglsa
      121 vkrvdpigrn afcivsvdgs avgeplrygq nfllgtkggv sdklfylasd hktfrdfakk
      181 srlqkvflta elsyltfwqa ksldpqlrle hegfpvpaet kiiithcytn rnlavprtfc
      241 vwscfgrefe vichnyldsh kveedknywe iitgnpgped gtmperpkal pegyenklvs
//
LOCUS       XP_041325223             477 aa            linear   VRT 06-MAY-2021
DEFINITION  mothers against decapentaplegic homolog 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325223
VERSION     XP_041325223.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469289.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="mothers against decapentaplegic homolog 6"
                     /calculated_mol_wt=52321
     Region          146..253
                     /region_name="MH1_SMAD_6"
                     /note="N-terminal Mad Homology 1 (MH1) domain in SMAD6;
                     cd10493"
                     /db_xref="CDD:199817"
     Site            order(155,159,162,195..196,219)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:199817"
     Site            order(186,228,240,245)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:199817"
     Region          302..475
                     /region_name="MH2_SMAD_6"
                     /note="C-terminal Mad Homology 2 (MH2) domain in SMAD6;
                     cd10499"
                     /db_xref="CDD:199824"
     Site            order(317,325..326,328,337..341,345,349..352,354..355,361,
                     365..366,368,439,463,470,472,474)
                     /site_type="other"
                     /note="putative trimer interface [polypeptide binding]"
                     /db_xref="CDD:199824"
     CDS             1..477
                     /gene="SMAD6"
                     /coded_by="XM_041469289.1:213..1646"
                     /db_xref="GeneID:121354567"
ORIGIN      
        1 mfrskrsglv rrlwrsrvip drdggdgsar sghdlgatgs ckiaekspsa elravarsll
       61 lrepeerrga ageaaprgdp maerrgarlr gpgsapesdg rtvtcclfse repggpqppp
      121 aaapgpdgaa dggsperrgr eararlllle qelkavtysl lkrlkersld slleavesrg
      181 gmpggcvlva rtevrlggla apphlllgkl frwpdlqhpa elkplcecqs fgvadgptvc
      241 cnpyhfsrlc gpesppppys rlspndeqkp ldlsdstlsy teteatnspn vtpgdfsdas
      301 tspdavkrsh wcnvaywehr trvgrlytvy eqsvsifydl pqgngfclgq lnldnrsetv
      361 rrtrskigyg illskepdgv waynrsehpi fvnsptldip ncrtlivrkv mpgysikvfd
      421 yekscllqht aeldyadgpy dpnsvrisfa kgwgpcysrq fitscpcwle illsnnr
//
LOCUS       XP_041325225             124 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA guanine-N7 methyltransferase activating subunit isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325225
VERSION     XP_041325225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..124
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..124
                     /product="RNA guanine-N7 methyltransferase activating
                     subunit isoform X1"
                     /calculated_mol_wt=14992
     Region          16..90
                     /region_name="RAM"
                     /note="mRNA cap methylation, RNMT-activating mini protein;
                     pfam15320"
                     /db_xref="CDD:464643"
     CDS             1..124
                     /gene="RAMAC"
                     /coded_by="XM_041469291.1:1..375"
                     /db_xref="GeneID:121354568"
ORIGIN      
        1 mfqvfrmtsl admppnyetm fahrftadde eyqeylkrpa dpppiveewr nrsggnqrnr
       61 drfqdgryfr gdrynwqgdy ranqrpdrgw gnnyqqhrqg qsysshygqy gynsynpgpr
      121 yhpy
//
LOCUS       XP_041325226             118 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA guanine-N7 methyltransferase activating subunit isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325226
VERSION     XP_041325226.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469292.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..118
                     /product="RNA guanine-N7 methyltransferase activating
                     subunit isoform X2"
                     /calculated_mol_wt=14183
     Region          10..84
                     /region_name="RAM"
                     /note="mRNA cap methylation, RNMT-activating mini protein;
                     pfam15320"
                     /db_xref="CDD:464643"
     CDS             1..118
                     /gene="RAMAC"
                     /coded_by="XM_041469292.1:47..403"
                     /db_xref="GeneID:121354568"
ORIGIN      
        1 mtsladmppn yetmfahrft addeeyqeyl krpadpppiv eewrnrsggn qrnrdrfqdg
       61 ryfrgdrynw qgdyranqrp drgwgnnyqq hrqgqsyssh ygqygynsyn pgpryhpy
//
LOCUS       XP_041325227             679 aa            linear   VRT 06-MAY-2021
DEFINITION  U3 small nucleolar ribonucleoprotein protein MPP10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325227
VERSION     XP_041325227.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469293.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..679
                     /product="U3 small nucleolar ribonucleoprotein protein
                     MPP10"
                     /calculated_mol_wt=77846
     Region          27..571
                     /region_name="Mpp10"
                     /note="Mpp10 protein; pfam04006"
                     /db_xref="CDD:461128"
     CDS             1..679
                     /gene="MPHOSPH10"
                     /coded_by="XM_041469293.1:53..2092"
                     /db_xref="GeneID:121354569"
ORIGIN      
        1 maavpalpgl qgiqtclrva gaaaarpecf lsvqdglaad framtktlyd lnkgsdivrg
       61 gplkelvien fdeeqiwqql elqnnailnf fkksiardae dedlcllsdq eedgsdaeas
      121 sdkelednim eaepeqmdvy tkdkdktkak ekqsklresi mqkdsdedsd idfdiealeq
      181 qtkaakettl rrkgrksvvd dkffklaeme aflehaeked reeeeeeddi nyfediisdd
      241 eedseeakin pmkssrdmty kdffdlvddd dgdddgdddl vasdaeedqe eeadsaieeq
      301 neesmsefed mdemvehmrs keaskkvtfs lpddsetedv tevqlekgss pseikssfek
      361 rqekmskkik sleealleek pwqlkgevtg qkrpenslle etvlfdhavr mapviteett
      421 fqledlikqr ildeawddvv pkekpkeeaf eykkrisldh eksklslaei yeqeymklhq
      481 qkteeeenpe hkeiqemmds lfqkldalcn fhftpkppvp evkivsnlpa ismeevapva
      541 vsdaallape eikeknkagd vktdaektpt dkkrelrrkk lrkrmkrrek ekrqkllekm
      601 kpeqptklsk kaaaaklkrl tkegkasllk degkdkalks sqaffsqlqd qvrmqikdas
      661 klkkkqkkek aisvhklkl
//
LOCUS       XP_041325228             470 aa            linear   VRT 06-MAY-2021
DEFINITION  secretogranin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325228
VERSION     XP_041325228.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469294.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..470
                     /product="secretogranin-3 isoform X1"
                     /calculated_mol_wt=53499
     Region          19..470
                     /region_name="SGIII"
                     /note="Secretogranin-3; pfam15467"
                     /db_xref="CDD:464732"
     CDS             1..470
                     /gene="SCG3"
                     /coded_by="XM_041469294.1:184..1596"
                     /db_xref="GeneID:121354570"
ORIGIN      
        1 mflglwvalq vlallasrgh gfpkpagtdk aihnrqlsve rpleeqiaea eadknrkivp
       61 tenkpefrny sfvddlnllk svaerernek eresirssly eqqvalddad stknrrlvdd
      121 fdstksgldy kfqddpdglh qldgtpltae divqkiaari yeendrgvfd kivskllnlg
      181 litesqaytl edevaevlqq lianeakdre kesedfdypa srtdsdtkqk qqermtpsks
      241 dqdssmngea ddtldntwss snvlerrnel psednfedlq yfpnfyallk slnsetetke
      301 ketlitimkt lidfvkmmvk ygtitpeegv sylenldtmi aeqtkkklen pstktrtklt
      361 adksseeads tkeeaakmek eyevskdstk negqnaagns eesrgkseay leairkniew
      421 lkkhnkqgnk edydlsklrd fidqqadayv dkgildkeea dvikriygsl
//
LOCUS       XP_041325229             466 aa            linear   VRT 06-MAY-2021
DEFINITION  secretogranin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325229
VERSION     XP_041325229.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469295.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..466
                     /product="secretogranin-3 isoform X2"
                     /calculated_mol_wt=53071
     Region          19..466
                     /region_name="SGIII"
                     /note="Secretogranin-3; pfam15467"
                     /db_xref="CDD:464732"
     CDS             1..466
                     /gene="SCG3"
                     /coded_by="XM_041469295.1:184..1584"
                     /db_xref="GeneID:121354570"
ORIGIN      
        1 mflglwvalq vlallasrgh gfpkpagtdk aihnrqlsve rpleeqiaea eadknrkivp
       61 tenkpefrny sfvddlnllk svaerernek eresirssly eqqvalddad stknrrlvdd
      121 fdstksgldy kfqddpdglh qldgtpltae divqkiaari yeendrgvfd kivskllnlg
      181 litesqaytl edevaevlqq lianeakdre kesedfdypa srtdsdtkqk qqermtpsks
      241 dqdssmngea ddtldntwss snvlerrnel psednfedlq yfpnfyallk slnsetetke
      301 ketlitimkt lidfvkmmvk ygtitpeegv sylenldtmi aeqtkkklen pstktrtklt
      361 adksseeads tkeeaakmek eyevskdstk negqnaagns eesrgkseay leairkniew
      421 lkkhnkqdyd lsklrdfidq qadayvdkgi ldkeeadvik riygsl
//
LOCUS       XP_041325230             160 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic iron-sulfur assembly component 2A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325230
VERSION     XP_041325230.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469296.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..160
                     /product="cytosolic iron-sulfur assembly component 2A"
                     /calculated_mol_wt=18121
     Region          16..156
                     /region_name="COG5133"
                     /note="Uncharacterized conserved protein [Function
                     unknown]; cl00941"
                     /db_xref="CDD:470001"
     CDS             1..160
                     /gene="CIAO2A"
                     /coded_by="XM_041469296.1:47..529"
                     /db_xref="GeneID:121354571"
ORIGIN      
        1 malalallwq algrvwrspa gsarhappsr amehdraiev ydiirtirdp ekpntleele
       61 vvtencvevq eigedeylvi irftptvphc slatliglcl riklqrclpf rhkleiyise
      121 gthsteedin kqindkerva aamenpnlre iveqcvtepd
//
LOCUS       XP_041325231             365 aa            linear   VRT 06-MAY-2021
DEFINITION  methionyl-tRNA formyltransferase, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325231
VERSION     XP_041325231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..365
                     /product="methionyl-tRNA formyltransferase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=40819
     Region          21..331
                     /region_name="fmt"
                     /note="methionyl-tRNA formyltransferase; TIGR00460"
                     /db_xref="CDD:273088"
     CDS             1..365
                     /gene="MTFMT"
                     /coded_by="XM_041469297.1:16..1113"
                     /db_xref="GeneID:121354572"
ORIGIN      
        1 mrarvlragr eavraagppw rvlffgtdrf avstlralra agepseeslv srlevvtlps
       61 rlprdlpvrs carelqlpvh ewphtgpvgq fdvgvvasfg rllseelilq fpygvlnvhp
      121 sclprwrgpa pivhtvlhgd kvtgvtimei rpkrfdvgpi ikqeevavpp rctaqelegm
      181 lakmgasmll avlknlpesl knkkeqpkdg vtfapkisia kscikweeqt aaqiiklhra
      241 igsmfplqtl wkgttiklld fvevdnipdf sdqiqndcei vpgsvlfhkt sqtlmarcke
      301 gwvgiktvvl kkkltavdfy ngymhswfqq nprtvhqecr fqtlklsmak ktlkergila
      361 qdikq
//
LOCUS       XP_041325233             365 aa            linear   VRT 06-MAY-2021
DEFINITION  methionyl-tRNA formyltransferase, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325233
VERSION     XP_041325233.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469299.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..365
                     /product="methionyl-tRNA formyltransferase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=40819
     Region          21..331
                     /region_name="fmt"
                     /note="methionyl-tRNA formyltransferase; TIGR00460"
                     /db_xref="CDD:273088"
     CDS             1..365
                     /gene="MTFMT"
                     /coded_by="XM_041469299.1:15..1112"
                     /db_xref="GeneID:121354572"
ORIGIN      
        1 mrarvlragr eavraagppw rvlffgtdrf avstlralra agepseeslv srlevvtlps
       61 rlprdlpvrs carelqlpvh ewphtgpvgq fdvgvvasfg rllseelilq fpygvlnvhp
      121 sclprwrgpa pivhtvlhgd kvtgvtimei rpkrfdvgpi ikqeevavpp rctaqelegm
      181 lakmgasmll avlknlpesl knkkeqpkdg vtfapkisia kscikweeqt aaqiiklhra
      241 igsmfplqtl wkgttiklld fvevdnipdf sdqiqndcei vpgsvlfhkt sqtlmarcke
      301 gwvgiktvvl kkkltavdfy ngymhswfqq nprtvhqecr fqtlklsmak ktlkergila
      361 qdikq
//
LOCUS       XP_041325234             365 aa            linear   VRT 06-MAY-2021
DEFINITION  methionyl-tRNA formyltransferase, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325234
VERSION     XP_041325234.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469300.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..365
                     /product="methionyl-tRNA formyltransferase, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=40819
     Region          21..331
                     /region_name="fmt"
                     /note="methionyl-tRNA formyltransferase; TIGR00460"
                     /db_xref="CDD:273088"
     CDS             1..365
                     /gene="MTFMT"
                     /coded_by="XM_041469300.1:15..1112"
                     /db_xref="GeneID:121354572"
ORIGIN      
        1 mrarvlragr eavraagppw rvlffgtdrf avstlralra agepseeslv srlevvtlps
       61 rlprdlpvrs carelqlpvh ewphtgpvgq fdvgvvasfg rllseelilq fpygvlnvhp
      121 sclprwrgpa pivhtvlhgd kvtgvtimei rpkrfdvgpi ikqeevavpp rctaqelegm
      181 lakmgasmll avlknlpesl knkkeqpkdg vtfapkisia kscikweeqt aaqiiklhra
      241 igsmfplqtl wkgttiklld fvevdnipdf sdqiqndcei vpgsvlfhkt sqtlmarcke
      301 gwvgiktvvl kkkltavdfy ngymhswfqq nprtvhqecr fqtlklsmak ktlkergila
      361 qdikq
//
LOCUS       XP_041325235             355 aa            linear   VRT 06-MAY-2021
DEFINITION  methionyl-tRNA formyltransferase, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325235
VERSION     XP_041325235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="methionyl-tRNA formyltransferase, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=39611
     Region          16..321
                     /region_name="fmt"
                     /note="methionyl-tRNA formyltransferase; TIGR00460"
                     /db_xref="CDD:273088"
     CDS             1..355
                     /gene="MTFMT"
                     /coded_by="XM_041469301.1:69..1136"
                     /db_xref="GeneID:121354572"
ORIGIN      
        1 magpvlrhrp lrrehpaspa grrvppghga egepseeslv srlevvtlps rlprdlpvrs
       61 carelqlpvh ewphtgpvgq fdvgvvasfg rllseelilq fpygvlnvhp sclprwrgpa
      121 pivhtvlhgd kvtgvtimei rpkrfdvgpi ikqeevavpp rctaqelegm lakmgasmll
      181 avlknlpesl knkkeqpkdg vtfapkisia kscikweeqt aaqiiklhra igsmfplqtl
      241 wkgttiklld fvevdnipdf sdqiqndcei vpgsvlfhkt sqtlmarcke gwvgiktvvl
      301 kkkltavdfy ngymhswfqq nprtvhqecr fqtlklsmak ktlkergila qdikq
//
LOCUS       XP_041325236             898 aa            linear   VRT 06-MAY-2021
DEFINITION  multiple C2 and transmembrane domain-containing protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325236
VERSION     XP_041325236.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469302.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..898
                     /product="multiple C2 and transmembrane domain-containing
                     protein 2"
                     /calculated_mol_wt=102049
     Region          215..333
                     /region_name="C2A_MCTP_PRT"
                     /note="C2 domain first repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd04042"
                     /db_xref="CDD:176007"
     Site            order(230,236,283,285,290)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176007"
     Region          377..489
                     /region_name="C2B_MCTP_PRT"
                     /note="C2 domain second repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08376"
                     /db_xref="CDD:176022"
     Site            order(395,442,444,450)
                     /site_type="other"
                     /note="putative Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176022"
     Region          529..647
                     /region_name="C2C_MCTP_PRT"
                     /note="C2 domain third repeat found in Multiple C2 domain
                     and Transmembrane region Proteins (MCTP); cd08377"
                     /db_xref="CDD:176023"
     Site            order(545,551,597,599,605)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176023"
     Region          <791..>844
                     /region_name="PRT_C"
                     /note="Plant phosphoribosyltransferase C-terminal;
                     pfam08372"
                     /db_xref="CDD:337028"
     CDS             1..898
                     /gene="MCTP2"
                     /coded_by="XM_041469302.1:238..2934"
                     /db_xref="GeneID:121354574"
ORIGIN      
        1 mdldkqsvwg slkqktrpfl rnlsvrktkk rsgkmlerkg hsldrclsvs vpdmlevetl
       61 meeeeeetty ssaqvlsscs pksfsrsvvs lksrnasvka egedwlwasq qrtrmevtvt
      121 ppdtqavgih lvssrgaeag gspvsegkkr rssedlfdll qssrlsaals eegteypcge
      181 mdfdsslssq nfddqmalee andclselps pfaylltihl kegrnlvird rcgtsdpyvk
      241 fklngktlyk skvvyknlnp vwdetvvlpi qtldqnlwik vydrdltssd fmgsasvalt
      301 elelnrtteq vlkledpnsl eddmgvivln lslavkqgdf krnrwssrkk rtsskssftr
      361 nlrlseslrk nqlwnglvti tllegknmpr gglaeifill klgdqryksk tlcksanpqw
      421 reqfdfhyfs drkdmldiev wrkdnkkhee llgtchvdit alptkqtncl elplekhpgs
      481 llmliavapc tgvsisdlcv cplgdpnerq qisrrycikn sfrdmkdigf lqvkvlkavd
      541 lmaadfsgks dpfcvlelgn dmlqthtvyk nlnpewnkvf tfpikdihdv levtvfdedg
      601 dkppdflgkv aipllsirng kqscytlknk dleraskgvi yleldvlfnp ikasirtfkp
      661 rekrfteenr kfskkilsrn vdrvkkitma iwntiqflws cflwestvks liafvvfvvt
      721 vwtvelymvp lallvlfayn fslvttgkvn naqdaqelmg ldedededdk esekkglier
      781 ihmvqeiiia vqsileeias fgerikntfn wtvpflsvla clvlaaatvi lyfiplryiv
      841 liwginkftk klrnpyaidn nelldflsrv psdvqkvqqa elkpsssssp irkkrsal
//
LOCUS       XP_041325237             351 aa            linear   VRT 06-MAY-2021
DEFINITION  tropomodulin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325237
VERSION     XP_041325237.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469303.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="tropomodulin-2"
                     /calculated_mol_wt=39297
     Region          5..146
                     /region_name="Tropomodulin"
                     /note="pfam03250"
                     /db_xref="CDD:460862"
     Region          <209..338
                     /region_name="RNA1"
                     /note="Ran GTPase-activating protein (RanGAP) involved in
                     mRNA processing and transport [Translation, ribosomal
                     structure and biogenesis]; COG5238"
                     /db_xref="CDD:444072"
     CDS             1..351
                     /gene="LOC121354575"
                     /coded_by="XM_041469303.1:83..1138"
                     /db_xref="GeneID:121354575"
ORIGIN      
        1 mslpfrkele kykninedei lsklsedelk qlehvlddld penallpagf rqkdqttkpa
       61 tgpfdrerll sylekqaleh kdredfvpft gekkgkifip kekpvetrte ekvtldpele
      121 ealasasdte lydlaavlgv hnmvnnpkfd eagargkdgk givrnvvkge kvkpifeepp
      181 nptnveaslq rikandpglt evnlnnikni piptlkefak aletnthvkt fslaatrsnd
      241 pvaiafadml kvnktlksln vesnfitgtg ilalidalkk neslteikid nqrqqlgtav
      301 emeiakmlee nsrilkfgyq ftkqgprtrv aaaitknndl vrkkrveger q
//
LOCUS       XP_041325238             331 aa            linear   VRT 06-MAY-2021
DEFINITION  protein mono-ADP-ribosyltransferase PARP16 [Pyrgilauda ruficollis].
ACCESSION   XP_041325238
VERSION     XP_041325238.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469304.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="protein mono-ADP-ribosyltransferase PARP16"
                     /calculated_mol_wt=37575
     Region          17..96
                     /region_name="ARTD15_N"
                     /note="ARTD15 N-terminal domain; pfam18084"
                     /db_xref="CDD:465641"
     Region          108..279
                     /region_name="PARP"
                     /note="Poly(ADP-ribose) polymerase catalytic domain;
                     pfam00644"
                     /db_xref="CDD:395519"
     CDS             1..331
                     /gene="PARP16"
                     /coded_by="XM_041469304.1:30..1025"
                     /db_xref="GeneID:121354576"
ORIGIN      
        1 mstpgpgpge aapgareaar rdplaadlrc slfaaalqsy krdsalrpfp gryasgdtkd
       61 feglladtka lpslkeiles vpntdkrtwe lfswilsskv fmiqstkkke yekiqeltgm
      121 sgavvpapdy lfeivycdqm ntkfaetrge rdliyafhgs rlenfhsilh hglhchlnrt
      181 slfgegtylt sdlslallys phglgwqrsa lgpilsyvav ceiidhpdvk cqvkkknsee
      241 idrkrarvkn seggdvpqky fvvtnnqllr vkyllvysqk qhrrpshess wfythrfavm
      301 mmlylllliv igasnsptfi yywhrmfdse r
//
LOCUS       XP_041325239             296 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325239
VERSION     XP_041325239.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469305.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=31063
     CDS             1..296
                     /gene="LOC121354577"
                     /coded_by="XM_041469305.1:359..1249"
                     /db_xref="GeneID:121354577"
ORIGIN      
        1 mvppgppprs rtgpdtagpl asrdrdhrar graaapgptg aappaapraa rtprqspgra
       61 ersplpappe srcpgaaagd rsdrdrarpa aapppgrgaa pspagrerpe vvrgrtmrrg
      121 lfvlppaggr errargrvgg aaprrrsrgg pgrlspprag yempgspaps rpahaggrla
      181 gtvahcagrg plreprseqr cvlpcsvpsr prrpapagla aterlagqqn skrlgqgesl
      241 itrspccrsk pctprflrel rtstrapyer gaargrerle hsssspssrn epehhq
//
LOCUS       XP_041325240             296 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325240
VERSION     XP_041325240.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469306.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=31063
     CDS             1..296
                     /gene="LOC121354577"
                     /coded_by="XM_041469306.1:360..1250"
                     /db_xref="GeneID:121354577"
ORIGIN      
        1 mvppgppprs rtgpdtagpl asrdrdhrar graaapgptg aappaapraa rtprqspgra
       61 ersplpappe srcpgaaagd rsdrdrarpa aapppgrgaa pspagrerpe vvrgrtmrrg
      121 lfvlppaggr errargrvgg aaprrrsrgg pgrlspprag yempgspaps rpahaggrla
      181 gtvahcagrg plreprseqr cvlpcsvpsr prrpapagla aterlagqqn skrlgqgesl
      241 itrspccrsk pctprflrel rtstrapyer gaargrerle hsssspssrn epehhq
//
LOCUS       XP_041325241             255 aa            linear   VRT 06-MAY-2021
DEFINITION  U2 small nuclear ribonucleoprotein A' [Pyrgilauda ruficollis].
ACCESSION   XP_041325241
VERSION     XP_041325241.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469307.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="U2 small nuclear ribonucleoprotein A'"
                     /calculated_mol_wt=28322
     Region          1..175
                     /region_name="LRR_9"
                     /note="Leucine-rich repeat; pfam14580"
                     /db_xref="CDD:405295"
     Region          22..43
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          44..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          66..89
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          90..114
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          115..127
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..255
                     /gene="SNRPA1"
                     /coded_by="XM_041469307.1:98..865"
                     /db_xref="GeneID:121354579"
ORIGIN      
        1 mvkltaelie qaaqytnavr dreldlrgyk ipvienlgat ldqfdaidfs dneirkldgf
       61 pllrrlktll mnnnricrig enleqalpsl teliltnnni aelgeldpls tiksltylsv
      121 lrnpvtnkkh yrlylihkvp qvrvldfqkv klkdrqeaek mfkgkrgaql akdiarrakt
      181 fnpgaglptd kkktgpspgd veaikaaian astlaeverl kgllqagqip grerkpgpse
      241 dgeeemeedt vpngs
//
LOCUS       XP_041325242             355 aa            linear   VRT 06-MAY-2021
DEFINITION  sorbitol dehydrogenase [Pyrgilauda ruficollis].
ACCESSION   XP_041325242
VERSION     XP_041325242.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469308.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="sorbitol dehydrogenase"
                     /calculated_mol_wt=37926
     Region          9..348
                     /region_name="sorbitol_DH"
                     /note="Sorbitol dehydrogenase; cd05285"
                     /db_xref="CDD:176188"
     Site            order(43,45,49,55,58,68,117,120,154,273,296..297)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:176188"
     Site            order(43,45,68..69,154)
                     /site_type="other"
                     /note="catalytic Zn binding site [ion binding]"
                     /db_xref="CDD:176188"
     Site            order(98,101,104,112)
                     /site_type="other"
                     /note="structural Zn binding site [ion binding]"
                     /db_xref="CDD:176188"
     Site            order(158,180..182,201..203,207,222,248..249,251,271..273,
                     295..297)
                     /site_type="other"
                     /note="NADP binding site [chemical binding]"
                     /db_xref="CDD:176188"
     Site            order(160,171,173,189,192..194,196,205,221,236,304,
                     307..308,311)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:176188"
     CDS             1..355
                     /gene="SORD"
                     /coded_by="XM_041469308.1:184..1251"
                     /db_xref="GeneID:121354580"
ORIGIN      
        1 mavpgqnvav vvhragdlrl enrpipepgp nevllrmhsv gicgsdvhyw qhgrigdfvv
       61 kspmvlghea sgtvvkvgsg vthlkpgdrv aiepgvprem defcksgryn lsptiffcat
      121 ppddgnlcry ykhsasycyk lpdnvtfeeg alieplsvgi hackragvtl gskvfvsgsg
      181 piglvnviva kmmgaavvvv tdlsasrlqt akevgadfti qvknetpqev askvesvlgc
      241 mpeitvectg vqaciqagiy atrsggtlvl vglgpemvtv pivnaavrev dirgifrycn
      301 twpvaialla skrinvkplv thrfplekal eafettkrge gvkvmlkcdp tdqnp
//
LOCUS       XP_041325243             920 aa            linear   VRT 06-MAY-2021
DEFINITION  major intrinsically disordered Notch2-binding receptor 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325243
VERSION     XP_041325243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="major intrinsically disordered Notch2-binding
                     receptor 1"
                     /calculated_mol_wt=103742
     Region          763..915
                     /region_name="MINAR1_C"
                     /note="MINAR1 C-terminal domain; pfam06789"
                     /db_xref="CDD:462010"
     CDS             1..920
                     /gene="MINAR1"
                     /coded_by="XM_041469309.1:396..3158"
                     /db_xref="GeneID:121354581"
ORIGIN      
        1 mesnqesslf lvkileeldt kqntvsyqdl ckslcarfdl sqlaklrsvl fytacldpnf
       61 patlfkdkmr ctvnnqqskk imvaadivti fnliqmnggv akeklpvarh kvkkkesfes
      121 crsdteicnm adcvpdcvpn celneqdfsr gfpvrrsskc rkmdckdcqq fvpssepnfl
      181 lgvnkdmkgr aasldrlqal asysiatspp cemqstyfpm nienesisdq dslpisagik
      241 etfisndepf mmqscvqkrn ifkedfhnli tispnlipsn ktpedghrep qnrkesskqt
      301 ffnhsfempy ssqylnpiys pipdkrrvkh eslddlqast yfgpttvlgp qetkkwtgkp
      361 tkqtawpaks wslnteevpd fersffnrkq seekpryqns snpspnfpsv drhqsylnak
      421 dqqpimqasy avkpnghkpk eipsildvek hepvkkfkdk sinctsvqil sidrtmsvgt
      481 qteqqvlehk kckdlcaagq akygerhslk qsdddseivs ddisdifrfl ddmsisgstg
      541 vmqsscynst gslsqvhksd cesspehnlt kisngsacnk ldkvvrtdvs ntddelktsv
      601 cklvlrigei ekkleslsgv reeisqvlgk lskldqkiqq pekvsvqidl nsltsdaasd
      661 esnspqifqc hntphggkle nnpewccsda sgsnseslrv kalkkslftr rssrslteen
      721 sateskiasi snsprdwrai tytnqvgite eevkerdgge nkdwhrkske adrqyeipqp
      781 hrlskqpkda flieqvfsph pypaslkshm ksnplytdmr ltelaevkra qpswtieeyt
      841 rnsgdkgkia aldlqtqesl npnnleywme diytpgydsl lkrkeaefrr akvckiaali
      901 aaaactvilv ivvpictmks
//
LOCUS       XP_041325245             495 aa            linear   VRT 06-MAY-2021
DEFINITION  hepatic triacylglycerol lipase [Pyrgilauda ruficollis].
ACCESSION   XP_041325245
VERSION     XP_041325245.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469311.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="hepatic triacylglycerol lipase"
                     /calculated_mol_wt=56094
     Region          41..495
                     /region_name="lipo_lipase"
                     /note="lipoprotein lipase; TIGR03230"
                     /db_xref="CDD:132274"
     CDS             1..495
                     /gene="LIPC"
                     /coded_by="XM_041469311.1:162..1649"
                     /db_xref="GeneID:121354582"
ORIGIN      
        1 mrslqlsfll lsciiisant yegnkkealt srhehttrkk dqqnletrfr lytdraggsc
       61 qifvnqletl dkchfnaslp lviivhgwsv dgileswiwk maaalkshhe pmnviiadwl
      121 tlahqhypia vrntrttghe iaqllewlee svqfsrsnah ligyslgahv sgfagsfing
      181 tkkigritgl dpagplfegm sptdrlspdd anfvdaihtf tkqhmglsvg ikqpvahfdf
      241 ypnggtfqpg chilhvynhi aqlgiagitq tvkcahersv hlfidsllhk dkqstaywcn
      301 dintfnkglc lsckknrcnt lgynirkerl pksrrlflkt raympfkvyh yqfkihiine
      361 iqgkpidpaf tmaltgtkad aknlhiplae gitgnktysf litldtdigd iimikfkwel
      421 pplwgniwdt fqtiipwtkg thrpglivke irakagetqq kytfcpqsid nihlhpsqek
      481 ifvrcddlfq gqnrk
//
LOCUS       XP_041325246            1113 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane channel-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325246
VERSION     XP_041325246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1113
                     /product="transmembrane channel-like protein 3"
                     /calculated_mol_wt=126795
     Region          499..614
                     /region_name="TMC"
                     /note="TMC domain; pfam07810"
                     /db_xref="CDD:462275"
     CDS             1..1113
                     /gene="TMC3"
                     /coded_by="XM_041469312.1:116..3457"
                     /db_xref="GeneID:121354583"
ORIGIN      
        1 maaapgspal raaksckkqr tvkrqsgiyt yqepphsnsd ddageekaes hdpeqifqni
       61 qyqkeimsni rcrpwpmrqk lralrqakei vlkyegrltr trgyqaagae lwkkfirlay
      121 nfvvifipwe mrikkieshf gsgvasyfif lrwlfginiv ltimtgafvv lpellagapf
      181 gstlsktipk ehiasaqdld tiwslggylq ysvlfygyyg rdrkigkagy rlplayflvg
      241 mavfaysfii llkkmaknsr mslasasden ytfcwrlfca wdylignpea aeskaaaivn
      301 sireaileeq ekkksknlav tislriiani lvllslagsi yiiyfvvdrs qrlertkkel
      361 tlweknevsv vvslitmiap safelvaale myhprttlrf qlarvlvlyl gnlysliial
      421 ldkvdsmsvt dsdvnnnasn sttslatntl skddnltvps vqikrngfvt leehrtqglt
      481 dslvnqtisf ntqnpqdqcw etyvgqemlk lsiidmiftv asillidffr glcvrylsdc
      541 wcwdleskfp eygefkiaen vlhlvynqgm iwmgaffspc lpafnvlkli glmylrswav
      601 ltcnvphqqv frasrsnnfy lamllfmlfl cmlptifaia rykpslscgp fsgqekiydi
      661 vsetiqndfp twfntvityi sspvvvlpal lllfmliyyl qsiarslkft nnqlrmkiqt
      721 ertedkkkvv qmavariqnl dandkrpeqe tdiisqessv rsstprkngs vlnfespvsk
      781 gtriqtisqs vpqavpttdv vrpanatptt stsltpapsv ssvqkarndh itnrypsvvh
      841 rsaselcktk pytpvtfkkh tedvhsdplf rkairqvnsd aigarapvfl gcrpyatryf
      901 lvneneprkk slrstsrlqr hfrkeesgdi ielyprhirr yvvrtphqmy sphpsedeed
      961 eeelekefmn rshrprslsd lrpasrfyig dradghvlms kdlarvhyks wddgfeldld
     1021 rppyaykkvh lnypeprvkp kskqkleqsl tesdsisies ssdpqnssnd qyiqvihtkd
     1081 kypktgaklt kkksknsvdl smsepselvc snv
//
LOCUS       XP_041325247             759 aa            linear   VRT 06-MAY-2021
DEFINITION  spermatogenesis-associated protein 5-like protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325247
VERSION     XP_041325247.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469313.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..759
                     /product="spermatogenesis-associated protein 5-like
                     protein 1"
                     /calculated_mol_wt=82171
     Region          13..755
                     /region_name="CDC48"
                     /note="AAA family ATPase, CDC48 subfamily; TIGR01243"
                     /db_xref="CDD:273521"
     CDS             1..759
                     /gene="SPATA5L1"
                     /coded_by="XM_041469313.1:203..2482"
                     /db_xref="GeneID:121354586"
ORIGIN      
        1 meaavlkllp ldprdegtqr crlgpaalsf lgarigaplr islpggccvc tawprhdlad
       61 gyvqadltcs saglaardlr glslslgrlq llpcgllrta alrvvlrsaa lkkstpravl
      121 qetirellrn vyvspryvvt vapspenpvv yveilsaspl eegaglitpq tsikikevit
      181 lewyrhlseg taktpiagld dvgkslkemi dlpfrfpktf kklglsvpng vlligppgvg
      241 ktlmvkavak elgayllgis gpalhgsrpg egeenlrrvf ekgremsneg ptilffdeid
      301 slcpkrgssn sapedrivaq lltlldgags egkmiivaat nrpdaldpal rrpgrfdrev
      361 iigtptvtqr rsilqlltsd mpisaevdla klaemttgyv gadltalcre aamqavshss
      421 ldsaeteami nmgdfqeafk kiqpssfrsa vglteckpvt weqiggledv klklkqsvew
      481 pmkfpeafar mglshpkgil lygpsgcakt tlvkalatsc hcsflsvsga dlfspyvgds
      541 ekilsqvfrq arantpaiif ldeidsilgs ralcraghgv servlsvlln eldgvglkvt
      601 errggklqle aqcqeqsdee rklefqdtln kdfmvvaatn rpdmlddall rpgrldkmiy
      661 ipppdlkgrl silkicteki pldtdvslqd vavltdlfsg adienlckea allalqengl
      721 eatavkqehf lkslqivkps lsikdlefye kfsnqelas
//
LOCUS       XP_041325248             491 aa            linear   VRT 06-MAY-2021
DEFINITION  coronin-2B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325248
VERSION     XP_041325248.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469314.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="coronin-2B isoform X1"
                     /calculated_mol_wt=55977
     Region          26..471
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          56..96
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          102..146
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          151..188
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          195..230
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          236..277
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          284..323
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..491
                     /gene="CORO2B"
                     /coded_by="XM_041469314.1:164..1639"
                     /db_xref="GeneID:121354587"
ORIGIN      
        1 mrdlhksevl gskrglmswr pqyrsskfrn vygkaasreh cfdgipitkn vhdnhfcavn
       61 arflaivtes agggsflvip leqtgriepn ypkvcghqgn vldikwnpfi dniiascsed
      121 tsvriweipe gglkrnmtea vlelyghsrr vglvewhptt nnilfsagyd ykvliwnldi
      181 gepvkmidch tdvilcmsfn tdgsllattc kdkklrvvep rsgrvlqeas cknhrvnrvv
      241 flgstkrllt tgvsrwntrq ialwdqedls mplieeeidg lsgllfpfyd adthmlylag
      301 kgdgniryye igsekpylsy lmefrspapq kglgvmpkhg ldvsacevfr fyklitlkgl
      361 iepismivpr rsetyqediy pmtpgtepal tpdewlsgvn rdpilvslke gykrnskivf
      421 kapvrekksv vvngidllen vpprtenell rmffrqqdei rrlkdelsqk dirirqlqle
      481 lknfrnspkn n
//
LOCUS       XP_041325249             475 aa            linear   VRT 06-MAY-2021
DEFINITION  coronin-2B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325249
VERSION     XP_041325249.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469315.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="coronin-2B isoform X2"
                     /calculated_mol_wt=54168
     Region          10..455
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          40..80
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          86..130
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          135..172
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          179..214
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          220..261
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          268..307
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..475
                     /gene="CORO2B"
                     /coded_by="XM_041469315.1:158..1585"
                     /db_xref="GeneID:121354587"
ORIGIN      
        1 mswrpqyrss kfrnvygkaa srehcfdgip itknvhdnhf cavnarflai vtesagggsf
       61 lvipleqtgr iepnypkvcg hqgnvldikw npfidniias csedtsvriw eipegglkrn
      121 mteavlelyg hsrrvglvew hpttnnilfs agydykvliw nldigepvkm idchtdvilc
      181 msfntdgsll attckdkklr vveprsgrvl qeascknhrv nrvvflgstk rllttgvsrw
      241 ntrqialwdq edlsmpliee eidglsgllf pfydadthml ylagkgdgni ryyeigsekp
      301 ylsylmefrs papqkglgvm pkhgldvsac evfrfyklit lkgliepism ivprrsetyq
      361 ediypmtpgt epaltpdewl sgvnrdpilv slkegykrns kivfkapvre kksvvvngid
      421 llenvpprte nellrmffrq qdeirrlkde lsqkdirirq lqlelknfrn spknn
//
LOCUS       XP_041325250             375 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-2,8-sialyltransferase 8B [Pyrgilauda ruficollis].
ACCESSION   XP_041325250
VERSION     XP_041325250.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469316.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..375
                     /product="alpha-2,8-sialyltransferase 8B"
                     /calculated_mol_wt=42048
     Region          91..368
                     /region_name="GT29_ST8SIA2"
                     /note="alpha-N-acetylneuraminide
                     alpha-2,8-sialyltransferase 2; cd23987"
                     /db_xref="CDD:467715"
     Site            order(161..163,184..185,206,294..296,314..315,328..330,
                     346)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:467715"
     CDS             1..375
                     /gene="ST8SIA2"
                     /coded_by="XM_041469316.1:67..1194"
                     /db_xref="GeneID:121354588"
ORIGIN      
        1 mplpcrgwtl alltllvgfl ifadiseiee esgssggrgt irsavnslhs ksnraevvin
       61 dssspavvdr snesikhnik passkwrhnq tlslkirkqi lkfldaekdi svlkgtlkpg
      121 diihyvfdrd stmnvsqnly ellprtsplk gkqfpscaiv gnsgvllssg cgpeidahsf
      181 vircnlapvq eysqdvgmkt dlvtmnpsvi qrafedlvne twrekllqrl hslngsilwi
      241 pafmakggke rvewvnelil khhinvrtay pslrllhavr gywltnkvhi krpttgllmy
      301 tlatrfcnqi ylygfwpfpl dqnqnpvkyh yydslkygyt sqasphtmpl efkalktlhq
      361 qgalkltvge cdgat
//
LOCUS       XP_041325251            1570 aa            linear   VRT 06-MAY-2021
DEFINITION  centrosomal protein of 152 kDa isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325251
VERSION     XP_041325251.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469317.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1570
                     /product="centrosomal protein of 152 kDa isoform X1"
                     /calculated_mol_wt=180573
     Region          <159..716
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          <442..>998
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1570
                     /gene="CEP152"
                     /coded_by="XM_041469317.1:98..4810"
                     /db_xref="GeneID:121354590"
ORIGIN      
        1 msldfdsgal qtqhededyd qedyareqel qqlltdlphd mledsgdqls sysdcsiqet
       61 eeqsrepgkl dgrwndhpli sdppnqfvas dvvngqspes ykvtykpyqn gihqnipgiq
      121 egnrrnevfe glqheflgnd enssenmqil qlqvlnkare rqleelnekl eksaqqiryl
      181 nhqlsmvkde kdglalslhe sqklyqngre remhleaqik aletqiqtlt tneeqilkqs
      241 kvaevamesm qkqllelqrs dalqrareqh eaiisalkqk yeqqvlsleq kldttqsalr
      301 eqkelcknlg ehvkqlekml eetkcektei inrltrslee sqkqcanllq tgsmqetnql
      361 rfqlqqaqsa qiisnnmnka lqeelmelke eialyesaak lgvflndagg eqpmslgdsy
      421 velgikkmtg kkpkfcsaiq nrdvdkelsk deiivelkae lerllssnkm krnqitqlqn
      481 slkdcqktle eykqlkaeka srdsepvtnl kdasdnlkee vlrlkkanea llqeveahas
      541 tieelkknee klkslnqdlc cqmrkmvqef dhdkqeaidr certyqqhhe dtkahfekel
      601 merfamekql llqtsedtis qlkdnieeln keitavkecy igvcrekdal ettlrqkfqq
      661 eqqlkeeklk kqlleekels lkllrtelee ehirsmiaak kqwleeknqq vqeevalakv
      721 hwekeekenn eqvfaklere wqsrleevrr tvaecndcsc qtdqvvdeas akelegavqd
      781 qrlqiqkslk enaaseealk efelemenky cknlssqvda alaqarakwl qeyklnlkte
      841 qekwekehqk ttaeqlalvl saaeekwkke yestetpglr vkeleekiis lrrelelkne
      901 eipaavkael akarvqwnke kqeeilqiqe qnerdyqsfl ddhrnrikev latakedfak
      961 qkndlsiqke aeikmllnqk qreweaqeak rlqdemkrhe ektlveleyl lseiheelvk
     1021 ctqskhswkd ncfdshvqlt sqdkdklkac lqkayrntvc tilekkerew kekyeelvsn
     1081 ankesypypq rgagntgdva rppvcnvghq aeaqrrlrrq tplqeagtdk enemvpgali
     1141 aqnsdmktkl kdqgspprsl sregisepca ssdsvkglee mrahyikals kikcdmlcyi
     1201 reskeraaem ikvevlrerq etarkmrkyy ltclqqlltd ngkhegaekk imdaasklam
     1261 makgletplr hipqhksacp alrlnsdpgg ecskrdcvlr trshhmesks csesstekat
     1321 dkvvqkrvpr dlrqqfdgmq tktqhllcet vtsniqsrnn sqnldgasrg vlpecypned
     1381 grygpianid kgplcavsng dappsagqga lqnrqiprvt nghsssgpth hmlkskngrt
     1441 glkedkciks cgkwktkskr sqefdfkdpp erdegsssew ssgdgsmyld cgempllypq
     1501 qkantnvqaq tvyceeflhi rsfspadenv tsqrdissgs gktlstksnt kvysrgqqit
     1561 npehtsflns
//
LOCUS       XP_041325252            1481 aa            linear   VRT 06-MAY-2021
DEFINITION  centrosomal protein of 152 kDa isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325252
VERSION     XP_041325252.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469318.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1481
                     /product="centrosomal protein of 152 kDa isoform X2"
                     /calculated_mol_wt=170292
     Region          <123..887
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1481
                     /gene="CEP152"
                     /coded_by="XM_041469318.1:98..4543"
                     /db_xref="GeneID:121354590"
ORIGIN      
        1 msldfdsgal qtqhededyd qedyareqel qqlltdlphd mledsgdqls sysdcsiqet
       61 eeqsrepgkl dgrwndhpli sdppnqfvas dvvngqspes ykvtykpyqn gihqnipgiq
      121 egnrrnevfe glqheflgnd enssenmqil qlqvlnkare rqleelnekl eksaqqiryl
      181 nhqlsmvkde kdglalslhe sqklyqngre remhleaqik aletqiqtlt tneeqilkqs
      241 kvaevamesm qkqllelqrs dalqrareqh eaiisalkqk yeqqvlsleq kldttqsalr
      301 eqkelcknlg ehvkqlekml eetkcektei inrltrslee sqkqcanllq tgsmqetnql
      361 rfqlqqaqsa qiisnnmnka lqeelmelke eialyesaak lgvflndagg eqpmslgdsy
      421 velgikkmtg kkpkfcsaiq nrdvdkelsk deiivelkae lerllssnkm krnqitqlqn
      481 slkdcqktle eykqlkaeka srdsepvtnl kdasdnlkee vlrlkkanea llqeveahas
      541 tieelkknee klkslnqdlc cqmrkmvqef dhdkqeaidr certyqqhhe dtkahfekel
      601 merfamekql llqtsedtis qlkdnieeln keitavkecy igvcrekdal ettlrqkfqq
      661 eqqlkeeklk kqlleekels lkllrtelee ehirsmiaak kqwleeknqq vqeevalakv
      721 hwekeekevd aalaqarakw lqeyklnlkt eqekwekehq kttaeqlalv lsaaeekwkk
      781 eyestetpgl rvkeleekii slrrelelkn eeipaavkae lakarvqwnk ekqeeilqiq
      841 eqnerdyqsf lddhrnrike vlatakedfa kqkndlsiqk eaeikmllnq kqreweaqea
      901 krlqdemkrh eektlveley llseiheelv kctqskhswk dncfdshvql tsqdkdklka
      961 clqkayrntv ctilekkere wkekyeelvs nankesypyp qrgagntgdv arppvcnvgh
     1021 qaeaqrrlrr qtplqeagtd kenemvpgal iaqnsdmktk lkdqgspprs lsregisepc
     1081 assdsvkgle emrahyikal skikcdmlcy ireskeraae mikvevlrer qetarkmrky
     1141 yltclqqllt dngkhegaek kimdaaskla mmakgletpl rhipqhksac palrlnsdpg
     1201 gecskrdcvl rtrshhmesk scsessteka tdkvvqkrvp rdlrqqfdgm qtktqhllce
     1261 tvtsniqsrn nsqnldgasr gvlpecypne dgrygpiani dkgplcavsn gdappsagqg
     1321 alqnrqiprv tnghsssgpt hhmlkskngr tglkedkcik scgkwktksk rsqefdfkdp
     1381 perdegssse wssgdgsmyl dcgempllyp qqkantnvqa qtvyceeflh irsfspaden
     1441 vtsqrdissg sgktlstksn tkvysrgqqi tnpehtsfln s
//
LOCUS       XP_041325253            1443 aa            linear   VRT 06-MAY-2021
DEFINITION  centrosomal protein of 152 kDa isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325253
VERSION     XP_041325253.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469319.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1443
                     /product="centrosomal protein of 152 kDa isoform X3"
                     /calculated_mol_wt=165768
     Region          125..849
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1443
                     /gene="CEP152"
                     /coded_by="XM_041469319.1:98..4429"
                     /db_xref="GeneID:121354590"
ORIGIN      
        1 msldfdsgal qtqhededyd qedyareqel qqlltdlphd mledsgdqls sysdcsiqet
       61 eeqsrepgkl dgrwndhpli sdppnqfvas dvvngqspes ykvtykpyqn gihqnipgiq
      121 egnrrnevfe glqheflgnd enssenmqil qlqvlnkare rqleelnekl eksaqqiryl
      181 nhqlsmvkde kdglalslhe sqklyqngre remhleaqik aletqiqtlt tneeqilkqs
      241 kvaevamesm qkqllelqrs dalqrareqh eaiisalkqk yeqqvlsleq kldttqsalr
      301 eqkelcknlg ehvkqlekml eetkcektei inrltrslee sqkqcanllq tgsmqetnql
      361 rfqlqqaqsa qiisnnmnka lqeelmelke eialyesaak lgvflndagg eqpmslgdsy
      421 velgikkmtg kkpkfcsaiq nrdvdkelsk deiivelkae lerllssnkm krnqitqlqn
      481 slkdcqktle eykqlkaeka srdsepvtnl kdasdnlkee vlrlkkanea llqeveahas
      541 tieelkknee klkslnqdlc cqmrkmvqef dhdkqeaidr certyqqhhe dtkahfekel
      601 merfamekql llqtsedtis qlkdnieeln keitavkecy igvcrekdal ettlrqkfqq
      661 eqqlkeeklk kqlleekels lkllrtelee ehirsmiaak kqwleeknqq vqeevalakv
      721 hwekeekela lvlsaaeekw kkeyestetp glrvkeleek iislrrelel kneeipaavk
      781 aelakarvqw nkekqeeilq iqeqnerdyq sflddhrnri kevlataked fakqkndlsi
      841 qkeaeikmll nqkqreweaq eakrlqdemk rheektlvel eyllseihee lvkctqskhs
      901 wkdncfdshv qltsqdkdkl kaclqkayrn tvctilekke rewkekyeel vsnankesyp
      961 ypqrgagntg dvarppvcnv ghqaeaqrrl rrqtplqeag tdkenemvpg aliaqnsdmk
     1021 tklkdqgspp rslsregise pcassdsvkg leemrahyik alskikcdml cyireskera
     1081 aemikvevlr erqetarkmr kyyltclqql ltdngkhega ekkimdaask lammakglet
     1141 plrhipqhks acpalrlnsd pggecskrdc vlrtrshhme skscsesste katdkvvqkr
     1201 vprdlrqqfd gmqtktqhll cetvtsniqs rnnsqnldga srgvlpecyp nedgrygpia
     1261 nidkgplcav sngdappsag qgalqnrqip rvtnghsssg pthhmlkskn grtglkedkc
     1321 ikscgkwktk skrsqefdfk dpperdegss sewssgdgsm yldcgempll ypqqkantnv
     1381 qaqtvyceef lhirsfspad envtsqrdis sgsgktlstk sntkvysrgq qitnpehtsf
     1441 lns
//
LOCUS       XP_041325254            1163 aa            linear   VRT 06-MAY-2021
DEFINITION  cytosolic carboxypeptidase 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325254
VERSION     XP_041325254.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469320.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1163
                     /product="cytosolic carboxypeptidase 4"
                     /calculated_mol_wt=131564
     Region          605..740
                     /region_name="Pepdidase_M14_N"
                     /note="Cytosolic carboxypeptidase N-terminal domain;
                     pfam18027"
                     /db_xref="CDD:407865"
     Region          765..1032
                     /region_name="M14_Nna1"
                     /note="Peptidase M14-like domain of ATP/GTP binding
                     proteins and cytosolic carboxypeptidases; cd06906"
                     /db_xref="CDD:349477"
     Site            order(814,817,864,873..874,911..912,921,996)
                     /site_type="active"
                     /db_xref="CDD:349477"
     CDS             1..1163
                     /gene="AGBL1"
                     /coded_by="XM_041469320.1:36..3527"
                     /db_xref="GeneID:121354591"
ORIGIN      
        1 mpvrqpallp pfslaffess cdkdvilnil svltdllslg tgrrihyvvs kggseallqa
       61 lataartepp ehgtllpllr llarvgqrdr kfglkvqkae atdiilsltr rhlghhlhlt
      121 hclwvlrvca snvttgtmlg ingamellfk vitpyskrhv rtvraaigal aallksksns
      181 rravnrgylg ellrlyqdwh rndvsnnyiy irrglllclk yitniqlgrd tflgsrgmei
      241 lftsvqdcls cknldpiitt athilrkcyp kehlpvvtvr ssysfplpgn asaeppcegs
      301 eddsesegee eaekdwdned veskeedgdl etdvnklrsr pvldrpeqel ekyealctel
      361 fqnfqelefe seekksledr teslpstpsh fipsdtsvkh pncrwrnqsv temgpdpgeq
      421 dfkvpllswr kekciwdknd enrdiaekaq dknfceeedp arshafalcs llkdaawykk
      481 vfyphceasi npgpegrles sdivrnllek hqgdipfhnp cfyaarakcv ksipgyrela
      541 fpdfwghqpp pyskpvlerk hgvqrdkvld dvrrliqpgd vigrtvfdld dpslsspaap
      601 gcltffskfe sgnlrkviqv refeydliln advnssqhhq wfyfevrdmk savpyrfnii
      661 ncekfnsqfn ygmqlvmysv realqgrprw tragqeicyy knhyrcrsaa agggvrgrfy
      721 ytltfsikfp hrddvcylay hypytystmm shldileqnr npkkvywrqq tlcqtlggnp
      781 cplltitamp esknrddleq fcsrpyvflt arvhpgesna swvmkgtlef lvssdpiael
      841 lrkcfifkiv pmlnpdgvin gnlrcslsgd dlnrqwltps sqlhptiyha kgllyylrsi
      901 graplvfcdy hghsqkknvf lygcsiketl wqagcmvdia vvtedvgyrt lpkildkvap
      961 afvmnscsfl veksrastar vvvwkemgvl rsytmestyc scshglyrgl qlgtqeleem
     1021 gskfclglli lhlkslpcsk elmaqaalll dleeeitdra qrrcsnssle sddeppcaee
     1081 idydtasssd geeefleldq eiqeclscve getedegvtt gqtcssralr glyissqpap
     1141 nstalplgss alglcrgfes spv
//
LOCUS       XP_041325255             702 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: SKI family transcriptional corepressor 1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325255
VERSION     XP_041325255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469321.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..702
                     /product="LOW QUALITY PROTEIN: SKI family transcriptional
                     corepressor 1"
                     /calculated_mol_wt=70254
     Region          38..128
                     /region_name="DHD_Skor"
                     /note="Dachshund-homology domain found in SKI family
                     transcriptional corepressors, Skor1, Skor2 and similar
                     proteins; cd21080"
                     /db_xref="CDD:410783"
     Region          141..233
                     /region_name="c-SKI_SMAD_bind"
                     /note="c-SKI Smad4 binding domain; smart01046"
                     /db_xref="CDD:198114"
     Region          597..>672
                     /region_name="OmpH"
                     /note="Outer membrane protein (OmpH-like); pfam03938"
                     /db_xref="CDD:461098"
     CDS             1..702
                     /gene="SKOR1"
                     /coded_by="XM_041469321.1:1..2109"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121354592"
ORIGIN      
        1 meaiasqmgn grdassspns kqelqpyqgs ntlkpnqvge tslygvpivs lvidgqerlc
       61 laqisntllk nysyneihnr rvalgitcvq ctpvqleilr ragampissr rcgmitkrea
      121 erlcksflge hkppklpenf afdvvhecaw gsrgsfipar ynssrakcik csycsmyfsp
      181 nkfifhshrt pdskytqpda anfnswrrhl klsdktatee lshawedvka mfnggtrkrt
      241 fslqgaaagg pgagspaaka alhpppxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
      301 xxxxxxxxxx xxxxxxxxyp vipvpskgfg mlqklppplf phpygfpaaa fglcpkkqee
      361 alggagggea gkggalppgm fwgpphphph qpaqpphqpg aakdtgvyps fpvfwpaags
      421 lpvppypaqs pakaaatavv vaaaaaaaaa arpvcaaprl lagpeepppp agadapeekt
      481 geagaqeggq gpdgspersg ssgayevfap ergellqplk paaslgapaa flctpeakeq
      541 dkednhsaae dlesrksyqd qrnvshpspv ntdrgeegla mevtgtqlle kdienlarde
      601 lqklvleqme lrkklerdfq slkdnfqdqm krelayreem vqqlqivrdt lcneldqerk
      661 aryaiqqklk eahdalhhfs ckmltprhcs gncsfkppll pq
//
LOCUS       XP_041325256            2640 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXa isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325256
VERSION     XP_041325256.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469322.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2640
                     /product="unconventional myosin-IXa isoform X1"
                     /calculated_mol_wt=302375
     Region          16..111
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          161..1005
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(188..196,240..247,286..296,538..543)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            188..196
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            240..247
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            286..296
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            481
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            538..543
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(567..578,581..590)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            941..950
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(953..980,984..1005)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          1111..1138
                     /region_name="IQCD"
                     /note="IQ (isoleucine-glutamine) motif containing D
                     (IQCD); cd23767"
                     /db_xref="CDD:467745"
     Region          1136..1157
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          <1438..>1582
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          2080..2137
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2146..2331
                     /region_name="RhoGAP_myosin_IXA"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXA. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04406"
                     /db_xref="CDD:239871"
     Site            order(2183,2220,2224,2293,2296..2297,2322)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239871"
     Site            2183
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239871"
     CDS             1..2640
                     /gene="MYO9A"
                     /coded_by="XM_041469322.1:207..8129"
                     /db_xref="GeneID:121354593"
ORIGIN      
        1 msvndvggrr rfedseytlh iypgsiaegt iycpitarkt staaevidsl inklqlektk
       61 cyvlaevkef ggeewilnpt dcpvqrmmlw prmalenris gedyrfllre knldgsihyg
      121 slqswlrvte errrmvergf lpqpqqkdyd dlcglpdlne ktllenlrnr fkqekiytyv
      181 gsilivinpf kflpiynpky vkmydnhqlg klephiyava dvayhamlqr kknqcivisg
      241 esgsgktqst nflihhltal sqkgfasgve qiilgagpvl eafgnaktah nnnssrfgkf
      301 iqvnyqetgt vrgayvekyl leksrlvyqe hnernyhvfy yllagaseee rsafhlkqpe
      361 eyhylnqmtk kplreswddy cydsepdcfs vegedlkhdf erlqlamemv gflpktrrqi
      421 fsllsailhl gnirykkkty rddsidicnp eilpvvsell evkeemlfea lvtrktvtvg
      481 eklilpykla eavtvrnsma kslysalfdw ivfrinhall nskdmeestk tlsigvldif
      541 gfedyennsf eqfcinfane rlqhyfnqhi fkleqeeyra egiswhnidy idnsscinli
      601 skkptgllhl ldeesnfpqa tnqtlldkfk rqhegnsyie fpavmepafi ikhyagkvky
      661 gvkdfreknt dhmrpdival lrssknafvc gmigidpvav frwavlraff ramvafreag
      721 kryvekktgh ddavpcavlk svdsfsflhh pvhqrsleil qrckeekysi trksprtpls
      781 dlqgvntine rsprdaygvg wngrmgmrhn rlsspgtfld kdgifvnttn skllerahgi
      841 lmrnknfkak pslpkhlldv kslkhltnlt lhdritksll hlhkkkkpps isaqfqasln
      901 klmetlgqae pyfvkcirsn aeklplrfnd slvlrqlryt gmletvrirq sgysckysfq
      961 dfvnhfhvll pqgispskhn ihdffrkikl dpdnyqvgrt mvfmkererq llqdllhqev
     1021 lrritllqrw frsllcrrqf lslrhaaisi qrfwrsyqsr kkgkpspdpl vlskaavilq
     1081 thwrgfverr rflqmqfaah liqscwreht rrrhaaatsi qaawrghrtr qaytarrsra
     1141 vclqaacrgy larqrfralk ehqlkemqle nglagreedg leadgleikg sdpskwedss
     1201 feervraveq hksllennrv nhvdpldtsl ykrherassq sgmdteeeii vrerpksled
     1261 lnqkkvvrak resrrmrele qakfslellk vrstgglsps eeqrwstelv sealhspqgt
     1321 pesessqgsf ellssedtss sklislvlde hdtqsfsmds lpsspqaqlq ekpfcaadgn
     1381 ndlpgcrqtp adtvlpdnls rkergvgdpq nvikahpret llssnlptfy vppqdnvkvk
     1441 mvennlrnka mereertvml sevrkdsepd qgkaleeeee kdkpstkree rgtvtaaral
     1501 spgsvikrle klnvekeerq kqlqlqnere mmeqirqqke ilerqrkafe qqgrvealqr
     1561 teqsrvkdps lkpskkpdsr pqsvlilhpq srgehsptpg maptsavdik gltvgtrgss
     1621 pahsapkdrp vsmfverreg leprchskpa ldpkdhpgsh fsrterlrqp rmpnqateet
     1681 ransmfftpk dnpfglhrea nhqclskget rkpfkmpgsg rgevprpshk kkarmartrs
     1741 dfltrgtfad gegdteeedy dgsfefllss ehpphaeavp aarlgqacys dsemtvqrft
     1801 sgegqaklhk tmsqgeigkl aatqknltpd grpqrakmrf wvkgkqgekk tpreklatqs
     1861 ellelyaeqe apgretisgl qigeaelgph hltpprspel sgiyrrefke nkepspkvkr
     1921 krsvkisnva lepvqwqnds lqiitsasdl ksmdefllkk mneldnedsk kdtlvdvvfk
     1981 kalkefrqni fsfyssalam ddgksirykd lyalfeqile ktmrleqrdw sespvkvwvn
     2041 tfkvfldeym ieykpldyta gkmpkterkk rrkkeadvve ehnghifkat qysiptycey
     2101 cssliwimdr asvcklckya chkkcclktt tkcskkhdpe lsprqfgvel srltseerav
     2161 pllvekliny iemhglyteg iyrksgstnk ikelrqgldt didnvnlddy nihviasvfk
     2221 qwlrdlpnpl mtfelyeefl rvmglqerke tvrgvysvid qlsrthlstl erlifhlvri
     2281 alqeetnrms analaivfap cilrcpdttd plqsvqdisk tttcvelivi eqmnkykarl
     2341 kdinslefae nkaksrlsli rrsmgkgrvr rgafpspasp vtgrlpsvtd vpeetlssee
     2401 amemevteqq qvamqqeekv lteqieslqk ekeeltfeml tleprasdde tleseasigt
     2461 adssenlnfd segaisdrse rsvaltslrp akaegpsrlr rhprmrldpa eptdtpisss
     2521 ssssqsstsc lphlprkrfq myskspfyra gghgeapetr aspegltgpl hhpedrpqft
     2581 trgtfnpekg kqklksvkss ppktkeppdg gpgggrkrnp eadcaaaqpl vllgsnefmv
//
LOCUS       XP_041325257            2639 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXa isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325257
VERSION     XP_041325257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469323.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2639
                     /product="unconventional myosin-IXa isoform X2"
                     /calculated_mol_wt=302303
     Region          16..111
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          161..1005
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(188..196,240..247,286..296,538..543)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            188..196
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            240..247
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            286..296
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            481
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            538..543
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(567..578,581..590)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            941..950
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(953..980,984..1005)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          1111..1138
                     /region_name="IQCD"
                     /note="IQ (isoleucine-glutamine) motif containing D
                     (IQCD); cd23767"
                     /db_xref="CDD:467745"
     Region          1136..1157
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          <1438..>1582
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          2079..2136
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2145..2330
                     /region_name="RhoGAP_myosin_IXA"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXA. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04406"
                     /db_xref="CDD:239871"
     Site            order(2182,2219,2223,2292,2295..2296,2321)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239871"
     Site            2182
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239871"
     CDS             1..2639
                     /gene="MYO9A"
                     /coded_by="XM_041469323.1:207..8126"
                     /db_xref="GeneID:121354593"
ORIGIN      
        1 msvndvggrr rfedseytlh iypgsiaegt iycpitarkt staaevidsl inklqlektk
       61 cyvlaevkef ggeewilnpt dcpvqrmmlw prmalenris gedyrfllre knldgsihyg
      121 slqswlrvte errrmvergf lpqpqqkdyd dlcglpdlne ktllenlrnr fkqekiytyv
      181 gsilivinpf kflpiynpky vkmydnhqlg klephiyava dvayhamlqr kknqcivisg
      241 esgsgktqst nflihhltal sqkgfasgve qiilgagpvl eafgnaktah nnnssrfgkf
      301 iqvnyqetgt vrgayvekyl leksrlvyqe hnernyhvfy yllagaseee rsafhlkqpe
      361 eyhylnqmtk kplreswddy cydsepdcfs vegedlkhdf erlqlamemv gflpktrrqi
      421 fsllsailhl gnirykkkty rddsidicnp eilpvvsell evkeemlfea lvtrktvtvg
      481 eklilpykla eavtvrnsma kslysalfdw ivfrinhall nskdmeestk tlsigvldif
      541 gfedyennsf eqfcinfane rlqhyfnqhi fkleqeeyra egiswhnidy idnsscinli
      601 skkptgllhl ldeesnfpqa tnqtlldkfk rqhegnsyie fpavmepafi ikhyagkvky
      661 gvkdfreknt dhmrpdival lrssknafvc gmigidpvav frwavlraff ramvafreag
      721 kryvekktgh ddavpcavlk svdsfsflhh pvhqrsleil qrckeekysi trksprtpls
      781 dlqgvntine rsprdaygvg wngrmgmrhn rlsspgtfld kdgifvnttn skllerahgi
      841 lmrnknfkak pslpkhlldv kslkhltnlt lhdritksll hlhkkkkpps isaqfqasln
      901 klmetlgqae pyfvkcirsn aeklplrfnd slvlrqlryt gmletvrirq sgysckysfq
      961 dfvnhfhvll pqgispskhn ihdffrkikl dpdnyqvgrt mvfmkererq llqdllhqev
     1021 lrritllqrw frsllcrrqf lslrhaaisi qrfwrsyqsr kkgkpspdpl vlskaavilq
     1081 thwrgfverr rflqmqfaah liqscwreht rrrhaaatsi qaawrghrtr qaytarrsra
     1141 vclqaacrgy larqrfralk ehqlkemqle nglagreedg leadgleikg sdpskwedss
     1201 feervraveq hksllennrv nhvdpldtsl ykrherassq sgmdteeeii vrerpksled
     1261 lnqkkvvrak resrrmrele qakfslellk vrstgglsps eeqrwstelv sealhspqgt
     1321 pesessqgsf ellssedtss sklislvlde hdtqsfsmds lpsspqaqlq ekpfcaadgn
     1381 ndlpgcrqtp adtvlpdnls rkergvgdpq nvikahpret llssnlptfy vppqdnvkvk
     1441 mvennlrnka mereertvml sevrkdsepd qgkaleeeee kdkpstkree rgtvtaaral
     1501 spgsvikrle klnvekeerq kqlqlqnere mmeqirqqke ilerqrkafe qqgrvealqr
     1561 teqsrvkdps lkpskkpdsr pqsvlilhpq srgehsptpg maptsavdik gltvgtrgss
     1621 pahsapkdrp vsmfverreg leprchskpa ldpkdhpgsh fsrterlrqp rmpnqateet
     1681 ransmfftpk dnpfglhrea nhqclskget rkpfkmpgsg rgevprpshk kkarmartrs
     1741 dfltrgtfad gegdteeedy dgsfefllss ehpphaeavp aarlgqacys dsemtvqrft
     1801 sgegqaklhk tmsqgeigkl aatqknltpd grpqrakmrf wvkgkqgekk tpreklatqs
     1861 ellelyaeqe apgretisgl qigeelgphh ltpprspels giyrrefken kepspkvkrk
     1921 rsvkisnval epvqwqndsl qiitsasdlk smdefllkkm neldnedskk dtlvdvvfkk
     1981 alkefrqnif sfyssalamd dgksirykdl yalfeqilek tmrleqrdws espvkvwvnt
     2041 fkvfldeymi eykpldytag kmpkterkkr rkkeadvvee hnghifkatq ysiptyceyc
     2101 ssliwimdra svcklckyac hkkcclkttt kcskkhdpel sprqfgvels rltseeravp
     2161 llveklinyi emhglytegi yrksgstnki kelrqgldtd idnvnlddyn ihviasvfkq
     2221 wlrdlpnplm tfelyeeflr vmglqerket vrgvysvidq lsrthlstle rlifhlvria
     2281 lqeetnrmsa nalaivfapc ilrcpdttdp lqsvqdiskt ttcvelivie qmnkykarlk
     2341 dinslefaen kaksrlslir rsmgkgrvrr gafpspaspv tgrlpsvtdv peetlsseea
     2401 memevteqqq vamqqeekvl teqieslqke keeltfemlt leprasddet leseasigta
     2461 dssenlnfds egaisdrser svaltslrpa kaegpsrlrr hprmrldpae ptdtpissss
     2521 sssqsstscl phlprkrfqm yskspfyrag ghgeapetra spegltgplh hpedrpqftt
     2581 rgtfnpekgk qklksvkssp pktkeppdgg pgggrkrnpe adcaaaqplv llgsnefmv
//
LOCUS       XP_041325258            2639 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXa isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325258
VERSION     XP_041325258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469324.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2639
                     /product="unconventional myosin-IXa isoform X3"
                     /calculated_mol_wt=302209
     Region          16..111
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          161..1005
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(188..196,240..247,286..296,538..543)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            188..196
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            240..247
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            286..296
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            481
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            538..543
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(567..578,581..590)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            941..950
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(953..980,984..1005)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          1111..1138
                     /region_name="IQCD"
                     /note="IQ (isoleucine-glutamine) motif containing D
                     (IQCD); cd23767"
                     /db_xref="CDD:467745"
     Region          1136..1157
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          <1438..>1582
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          2079..2136
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2145..2330
                     /region_name="RhoGAP_myosin_IXA"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXA. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04406"
                     /db_xref="CDD:239871"
     Site            order(2182,2219,2223,2292,2295..2296,2321)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239871"
     Site            2182
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239871"
     CDS             1..2639
                     /gene="MYO9A"
                     /coded_by="XM_041469324.1:207..8126"
                     /db_xref="GeneID:121354593"
ORIGIN      
        1 msvndvggrr rfedseytlh iypgsiaegt iycpitarkt staaevidsl inklqlektk
       61 cyvlaevkef ggeewilnpt dcpvqrmmlw prmalenris gedyrfllre knldgsihyg
      121 slqswlrvte errrmvergf lpqpqqkdyd dlcglpdlne ktllenlrnr fkqekiytyv
      181 gsilivinpf kflpiynpky vkmydnhqlg klephiyava dvayhamlqr kknqcivisg
      241 esgsgktqst nflihhltal sqkgfasgve qiilgagpvl eafgnaktah nnnssrfgkf
      301 iqvnyqetgt vrgayvekyl leksrlvyqe hnernyhvfy yllagaseee rsafhlkqpe
      361 eyhylnqmtk kplreswddy cydsepdcfs vegedlkhdf erlqlamemv gflpktrrqi
      421 fsllsailhl gnirykkkty rddsidicnp eilpvvsell evkeemlfea lvtrktvtvg
      481 eklilpykla eavtvrnsma kslysalfdw ivfrinhall nskdmeestk tlsigvldif
      541 gfedyennsf eqfcinfane rlqhyfnqhi fkleqeeyra egiswhnidy idnsscinli
      601 skkptgllhl ldeesnfpqa tnqtlldkfk rqhegnsyie fpavmepafi ikhyagkvky
      661 gvkdfreknt dhmrpdival lrssknafvc gmigidpvav frwavlraff ramvafreag
      721 kryvekktgh ddavpcavlk svdsfsflhh pvhqrsleil qrckeekysi trksprtpls
      781 dlqgvntine rsprdaygvg wngrmgmrhn rlsspgtfld kdgifvnttn skllerahgi
      841 lmrnknfkak pslpkhlldv kslkhltnlt lhdritksll hlhkkkkpps isaqfqasln
      901 klmetlgqae pyfvkcirsn aeklplrfnd slvlrqlryt gmletvrirq sgysckysfq
      961 dfvnhfhvll pqgispskhn ihdffrkikl dpdnyqvgrt mvfmkererq llqdllhqev
     1021 lrritllqrw frsllcrrqf lslrhaaisi qrfwrsyqsr kkgkpspdpl vlskaavilq
     1081 thwrgfverr rflqmqfaah liqscwreht rrrhaaatsi qaawrghrtr qaytarrsra
     1141 vclqaacrgy larqrfralk ehqlkemqle nglagreedg leadgleikg sdpskwedss
     1201 feervraveq hksllennrv nhvdpldtsl ykrherassq sgmdteeeii vrerpksled
     1261 lnqkkvvrak resrrmrele qakfslellk vrstgglsps eeqrwstelv sealhspqgt
     1321 pesessqgsf ellssedtss sklislvlde hdtqsfsmds lpsspqaqlq ekpfcaadgn
     1381 ndlpgcrqtp adtvlpdnls rkergvgdpq nvikahpret llssnlptfy vppqdnvkvk
     1441 mvennlrnka mereertvml sevrkdsepd qgkaleeeee kdkpstkree rgtvtaaral
     1501 spgsvikrle klnvekeerq kqlqlqnere mmeqirqqke ilerqrkafe qqgrvealqr
     1561 teqsrvkdps lkpskkpdsr pqsvlilhpq srgehsptpg maptsavdik gltvgtrgss
     1621 pahsapkdrp vsmfverreg leprchskpa ldpkdhpgsh fsrterlrqp rmpnqateet
     1681 ransmfftpk dnpfglqean hqclskgetr kpfkmpgsgr gevprpshkk karmartrsd
     1741 fltrgtfadg egdteeedyd gsfefllsse hpphaeavpa arlgqacysd semtvqrfts
     1801 gegqaklhkt msqgeigkla atqknltpdg rpqrakmrfw vkgkqgekkt preklatqse
     1861 llelyaeqea pgretisglq igeaelgphh ltpprspels giyrrefken kepspkvkrk
     1921 rsvkisnval epvqwqndsl qiitsasdlk smdefllkkm neldnedskk dtlvdvvfkk
     1981 alkefrqnif sfyssalamd dgksirykdl yalfeqilek tmrleqrdws espvkvwvnt
     2041 fkvfldeymi eykpldytag kmpkterkkr rkkeadvvee hnghifkatq ysiptyceyc
     2101 ssliwimdra svcklckyac hkkcclkttt kcskkhdpel sprqfgvels rltseeravp
     2161 llveklinyi emhglytegi yrksgstnki kelrqgldtd idnvnlddyn ihviasvfkq
     2221 wlrdlpnplm tfelyeeflr vmglqerket vrgvysvidq lsrthlstle rlifhlvria
     2281 lqeetnrmsa nalaivfapc ilrcpdttdp lqsvqdiskt ttcvelivie qmnkykarlk
     2341 dinslefaen kaksrlslir rsmgkgrvrr gafpspaspv tgrlpsvtdv peetlsseea
     2401 memevteqqq vamqqeekvl teqieslqke keeltfemlt leprasddet leseasigta
     2461 dssenlnfds egaisdrser svaltslrpa kaegpsrlrr hprmrldpae ptdtpissss
     2521 sssqsstscl phlprkrfqm yskspfyrag ghgeapetra spegltgplh hpedrpqftt
     2581 rgtfnpekgk qklksvkssp pktkeppdgg pgggrkrnpe adcaaaqplv llgsnefmv
//
LOCUS       XP_041325259            2621 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-IXa isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325259
VERSION     XP_041325259.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469325.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2621
                     /product="unconventional myosin-IXa isoform X4"
                     /calculated_mol_wt=300029
     Region          16..111
                     /region_name="RA_Myosin-IXa"
                     /note="Ras-associating (RA) domain found in Myosin-IXa;
                     cd17216"
                     /db_xref="CDD:340736"
     Region          161..986
                     /region_name="MYSc_Myo9"
                     /note="class IX myosin, motor domain; cd01385"
                     /db_xref="CDD:276836"
     Site            order(188..196,240..247,286..296,519..524)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276836"
     Site            188..196
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276836"
     Site            240..247
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276836"
     Site            286..296
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276836"
     Site            462
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:276836"
     Site            519..524
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276836"
     Site            order(548..559,562..571)
                     /site_type="active"
                     /note="relay loop [active]"
                     /db_xref="CDD:276836"
     Site            922..931
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276836"
     Site            order(934..961,965..986)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276836"
     Region          1092..1119
                     /region_name="IQCD"
                     /note="IQ (isoleucine-glutamine) motif containing D
                     (IQCD); cd23767"
                     /db_xref="CDD:467745"
     Region          1117..1138
                     /region_name="IQ"
                     /note="Calmodulin-binding motif; smart00015"
                     /db_xref="CDD:197470"
     Region          <1419..>1563
                     /region_name="DUF5401"
                     /note="Family of unknown function (DUF5401); pfam17380"
                     /db_xref="CDD:375164"
     Region          2061..2118
                     /region_name="C1_Myosin-IXa"
                     /note="protein kinase C conserved region 1 (C1 domain)
                     found in unconventional myosin-IXa and similar proteins;
                     cd20883"
                     /db_xref="CDD:410433"
     Region          2127..2312
                     /region_name="RhoGAP_myosin_IXA"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in myosins IXA. Class IX
                     myosins contain a characteristic head domain, a neck
                     domain and a tail domain which contains a C6H2-zinc
                     binding motif and a Rho-GAP domain. Class...; cd04406"
                     /db_xref="CDD:239871"
     Site            order(2164,2201,2205,2274,2277..2278,2303)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239871"
     Site            2164
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239871"
     CDS             1..2621
                     /gene="MYO9A"
                     /coded_by="XM_041469325.1:207..8072"
                     /db_xref="GeneID:121354593"
ORIGIN      
        1 msvndvggrr rfedseytlh iypgsiaegt iycpitarkt staaevidsl inklqlektk
       61 cyvlaevkef ggeewilnpt dcpvqrmmlw prmalenris gedyrfllre knldgsihyg
      121 slqswlrvte errrmvergf lpqpqqkdyd dlcglpdlne ktllenlrnr fkqekiytyv
      181 gsilivinpf kflpiynpky vkmydnhqlg klephiyava dvayhamlqr kknqcivisg
      241 esgsgktqst nflihhltal sqkgfasgve qiilgagpvl eafgnaktah nnnssrfgkf
      301 iqvnyqetgt vrgayvekyl leksrlvyqe hnernyhvfy yllagaseee rsafhlkqpe
      361 eyhylnqdcf svegedlkhd ferlqlamem vgflpktrrq ifsllsailh lgnirykkkt
      421 yrddsidicn peilpvvsel levkeemlfe alvtrktvtv geklilpykl aeavtvrnsm
      481 akslysalfd wivfrinhal lnskdmeest ktlsigvldi fgfedyenns feqfcinfan
      541 erlqhyfnqh ifkleqeeyr aegiswhnid yidnsscinl iskkptgllh lldeesnfpq
      601 atnqtlldkf krqhegnsyi efpavmepaf iikhyagkvk ygvkdfrekn tdhmrpdiva
      661 llrssknafv cgmigidpva vfrwavlraf framvafrea gkryvekktg hddavpcavl
      721 ksvdsfsflh hpvhqrslei lqrckeekys itrksprtpl sdlqgvntin ersprdaygv
      781 gwngrmgmrh nrlsspgtfl dkdgifvntt nskllerahg ilmrnknfka kpslpkhlld
      841 vkslkhltnl tlhdritksl lhlhkkkkpp sisaqfqasl nklmetlgqa epyfvkcirs
      901 naeklplrfn dslvlrqlry tgmletvrir qsgysckysf qdfvnhfhvl lpqgispskh
      961 nihdffrkik ldpdnyqvgr tmvfmkerer qllqdllhqe vlrritllqr wfrsllcrrq
     1021 flslrhaais iqrfwrsyqs rkkgkpspdp lvlskaavil qthwrgfver rrflqmqfaa
     1081 hliqscwreh trrrhaaats iqaawrghrt rqaytarrsr avclqaacrg ylarqrfral
     1141 kehqlkemql englagreed gleadgleik gsdpskweds sfeervrave qhksllennr
     1201 vnhvdpldts lykrherass qsgmdteeei ivrerpksle dlnqkkvvra kresrrmrel
     1261 eqakfslell kvrstgglsp seeqrwstel vsealhspqg tpesessqgs fellssedts
     1321 ssklislvld ehdtqsfsmd slpsspqaql qekpfcaadg nndlpgcrqt padtvlpdnl
     1381 srkergvgdp qnvikahpre tllssnlptf yvppqdnvkv kmvennlrnk amereertvm
     1441 lsevrkdsep dqgkaleeee ekdkpstkre ergtvtaara lspgsvikrl eklnvekeer
     1501 qkqlqlqner emmeqirqqk eilerqrkaf eqqgrvealq rteqsrvkdp slkpskkpds
     1561 rpqsvlilhp qsrgehsptp gmaptsavdi kgltvgtrgs spahsapkdr pvsmfverre
     1621 gleprchskp aldpkdhpgs hfsrterlrq prmpnqatee transmfftp kdnpfglhre
     1681 anhqclskge trkpfkmpgs grgevprpsh kkkarmartr sdfltrgtfa dgegdteeed
     1741 ydgsfeflls sehpphaeav paarlgqacy sdsemtvqrf tsgegqaklh ktmsqgeigk
     1801 laatqknltp dgrpqrakmr fwvkgkqgek ktpreklatq sellelyaeq eapgretisg
     1861 lqigeaelgp hhltpprspe lsgiyrrefk enkepspkvk rkrsvkisnv alepvqwqnd
     1921 slqiitsasd lksmdefllk kmneldneds kkdtlvdvvf kkalkefrqn ifsfyssala
     1981 mddgksiryk dlyalfeqil ektmrleqrd wsespvkvwv ntfkvfldey mieykpldyt
     2041 agkmpkterk krrkkeadvv eehnghifka tqysiptyce ycssliwimd rasvcklcky
     2101 achkkcclkt ttkcskkhdp elsprqfgve lsrltseera vpllveklin yiemhglyte
     2161 giyrksgstn kikelrqgld tdidnvnldd ynihviasvf kqwlrdlpnp lmtfelyeef
     2221 lrvmglqerk etvrgvysvi dqlsrthlst lerlifhlvr ialqeetnrm sanalaivfa
     2281 pcilrcpdtt dplqsvqdis ktttcveliv ieqmnkykar lkdinslefa enkaksrlsl
     2341 irrsmgkgrv rrgafpspas pvtgrlpsvt dvpeetlsse eamemevteq qqvamqqeek
     2401 vlteqieslq kekeeltfem ltleprasdd etleseasig tadssenlnf dsegaisdrs
     2461 ersvaltslr pakaegpsrl rrhprmrldp aeptdtpiss sssssqssts clphlprkrf
     2521 qmyskspfyr agghgeapet raspegltgp lhhpedrpqf ttrgtfnpek gkqklksvks
     2581 sppktkeppd ggpgggrkrn peadcaaaqp lvllgsnefm v
//
LOCUS       XP_041325260             313 aa            linear   VRT 06-MAY-2021
DEFINITION  GRAM domain-containing protein 2A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325260
VERSION     XP_041325260.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469326.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="GRAM domain-containing protein 2A isoform X1"
                     /calculated_mol_wt=35401
     Region          73..166
                     /region_name="PH-GRAM_GRAMDC"
                     /note="GRAM domain-containing protein (GRAMDC) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13220"
                     /db_xref="CDD:275406"
     CDS             1..313
                     /gene="GRAMD2A"
                     /coded_by="XM_041469326.1:761..1702"
                     /db_xref="GeneID:121354595"
ORIGIN      
        1 mhekaaplks peprhgrekl evshkqksld sldgslrlne alkdedikkc hrevaaskyn
       61 sqyhklfkdi pteesvlkvc scalqrdili qgrlyispnw lcfyanlfgk dikvvipvvs
      121 vqlikkhkta rllpnglait ttasrkyifv slisrdsvyd vlrrvcthlq vsskkslslk
      181 elseepdsvs levivpegkw rkvsptslsl slpdanyqci hrasvsslst kessftseep
      241 lvsesainte eeleveqscv aelrpsdyql lkifivlicl lvvsssylaf rifrleqqlc
      301 slnrdylsrg hrr
//
LOCUS       XP_041325261             313 aa            linear   VRT 06-MAY-2021
DEFINITION  GRAM domain-containing protein 2A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325261
VERSION     XP_041325261.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469327.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="GRAM domain-containing protein 2A isoform X1"
                     /calculated_mol_wt=35401
     Region          73..166
                     /region_name="PH-GRAM_GRAMDC"
                     /note="GRAM domain-containing protein (GRAMDC) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13220"
                     /db_xref="CDD:275406"
     CDS             1..313
                     /gene="GRAMD2A"
                     /coded_by="XM_041469327.1:401..1342"
                     /db_xref="GeneID:121354595"
ORIGIN      
        1 mhekaaplks peprhgrekl evshkqksld sldgslrlne alkdedikkc hrevaaskyn
       61 sqyhklfkdi pteesvlkvc scalqrdili qgrlyispnw lcfyanlfgk dikvvipvvs
      121 vqlikkhkta rllpnglait ttasrkyifv slisrdsvyd vlrrvcthlq vsskkslslk
      181 elseepdsvs levivpegkw rkvsptslsl slpdanyqci hrasvsslst kessftseep
      241 lvsesainte eeleveqscv aelrpsdyql lkifivlicl lvvsssylaf rifrleqqlc
      301 slnrdylsrg hrr
//
LOCUS       XP_041325262             313 aa            linear   VRT 06-MAY-2021
DEFINITION  GRAM domain-containing protein 2A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325262
VERSION     XP_041325262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469328.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="GRAM domain-containing protein 2A isoform X1"
                     /calculated_mol_wt=35401
     Region          73..166
                     /region_name="PH-GRAM_GRAMDC"
                     /note="GRAM domain-containing protein (GRAMDC) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13220"
                     /db_xref="CDD:275406"
     CDS             1..313
                     /gene="GRAMD2A"
                     /coded_by="XM_041469328.1:786..1727"
                     /db_xref="GeneID:121354595"
ORIGIN      
        1 mhekaaplks peprhgrekl evshkqksld sldgslrlne alkdedikkc hrevaaskyn
       61 sqyhklfkdi pteesvlkvc scalqrdili qgrlyispnw lcfyanlfgk dikvvipvvs
      121 vqlikkhkta rllpnglait ttasrkyifv slisrdsvyd vlrrvcthlq vsskkslslk
      181 elseepdsvs levivpegkw rkvsptslsl slpdanyqci hrasvsslst kessftseep
      241 lvsesainte eeleveqscv aelrpsdyql lkifivlicl lvvsssylaf rifrleqqlc
      301 slnrdylsrg hrr
//
LOCUS       XP_041325264             313 aa            linear   VRT 06-MAY-2021
DEFINITION  GRAM domain-containing protein 2A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325264
VERSION     XP_041325264.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469330.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="GRAM domain-containing protein 2A isoform X2"
                     /calculated_mol_wt=35401
     Region          73..166
                     /region_name="PH-GRAM_GRAMDC"
                     /note="GRAM domain-containing protein (GRAMDC) Pleckstrin
                     Homology-Glucosyltransferases, Rab-like GTPase activators
                     and Myotubularins (PH-GRAM) domain; cd13220"
                     /db_xref="CDD:275406"
     CDS             1..313
                     /gene="GRAMD2A"
                     /coded_by="XM_041469330.1:762..1703"
                     /db_xref="GeneID:121354595"
ORIGIN      
        1 mhekaaplks peprhgrekl evshkqksld sldgslrlne alkdedikkc hrevaaskyn
       61 sqyhklfkdi pteesvlkvc scalqrdili qgrlyispnw lcfyanlfgk dikvvipvvs
      121 vqlikkhkta rllpnglait ttasrkyifv slisrdsvyd vlrrvcthlq vsskkslslk
      181 elseepdsvs levivpegkw rkvsptslsl slpdanyqci hrasvsslst kessftseep
      241 lvsesainte eeleveqscv aelrpsdyql lkifivlicl lvvsssylaf rifrleqqlc
      301 slnrdylsrg hrr
//
LOCUS       XP_041325265             212 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325265
VERSION     XP_041325265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="sentrin-specific protease 8"
                     /calculated_mol_wt=23948
     Region          25..177
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..212
                     /gene="SENP8"
                     /coded_by="XM_041469331.1:161..799"
                     /db_xref="GeneID:121354596"
ORIGIN      
        1 mdpvvlsyvd sllrqsdval leppnwlndr iigfafeyfa nqqfqefshr vcfispevaq
       61 fikcalsqee iaiflqpldl lckellflpi ndnssqaagg thwsllvyfr dkkcfahyds
      121 hskcnsvhak qvagkleafl gkrggkatfv eekapaqqns ydcgmyvicn aealchgyfq
      181 grmepllqll tpsyitqkrs ewkalitkla qk
//
LOCUS       XP_041325266             212 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325266
VERSION     XP_041325266.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469332.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="sentrin-specific protease 8"
                     /calculated_mol_wt=23948
     Region          25..177
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..212
                     /gene="SENP8"
                     /coded_by="XM_041469332.1:126..764"
                     /db_xref="GeneID:121354596"
ORIGIN      
        1 mdpvvlsyvd sllrqsdval leppnwlndr iigfafeyfa nqqfqefshr vcfispevaq
       61 fikcalsqee iaiflqpldl lckellflpi ndnssqaagg thwsllvyfr dkkcfahyds
      121 hskcnsvhak qvagkleafl gkrggkatfv eekapaqqns ydcgmyvicn aealchgyfq
      181 grmepllqll tpsyitqkrs ewkalitkla qk
//
LOCUS       XP_041325267             212 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325267
VERSION     XP_041325267.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469333.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="sentrin-specific protease 8"
                     /calculated_mol_wt=23948
     Region          25..177
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..212
                     /gene="SENP8"
                     /coded_by="XM_041469333.1:546..1184"
                     /db_xref="GeneID:121354596"
ORIGIN      
        1 mdpvvlsyvd sllrqsdval leppnwlndr iigfafeyfa nqqfqefshr vcfispevaq
       61 fikcalsqee iaiflqpldl lckellflpi ndnssqaagg thwsllvyfr dkkcfahyds
      121 hskcnsvhak qvagkleafl gkrggkatfv eekapaqqns ydcgmyvicn aealchgyfq
      181 grmepllqll tpsyitqkrs ewkalitkla qk
//
LOCUS       XP_041325268             212 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325268
VERSION     XP_041325268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="sentrin-specific protease 8"
                     /calculated_mol_wt=23948
     Region          25..177
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..212
                     /gene="SENP8"
                     /coded_by="XM_041469334.1:93..731"
                     /db_xref="GeneID:121354596"
ORIGIN      
        1 mdpvvlsyvd sllrqsdval leppnwlndr iigfafeyfa nqqfqefshr vcfispevaq
       61 fikcalsqee iaiflqpldl lckellflpi ndnssqaagg thwsllvyfr dkkcfahyds
      121 hskcnsvhak qvagkleafl gkrggkatfv eekapaqqns ydcgmyvicn aealchgyfq
      181 grmepllqll tpsyitqkrs ewkalitkla qk
//
LOCUS       XP_041325269             212 aa            linear   VRT 06-MAY-2021
DEFINITION  sentrin-specific protease 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325269
VERSION     XP_041325269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="sentrin-specific protease 8"
                     /calculated_mol_wt=23948
     Region          25..177
                     /region_name="Peptidase_C48"
                     /note="Ulp1 protease family, C-terminal catalytic domain;
                     cl23802"
                     /db_xref="CDD:420019"
     CDS             1..212
                     /gene="SENP8"
                     /coded_by="XM_041469335.1:472..1110"
                     /db_xref="GeneID:121354596"
ORIGIN      
        1 mdpvvlsyvd sllrqsdval leppnwlndr iigfafeyfa nqqfqefshr vcfispevaq
       61 fikcalsqee iaiflqpldl lckellflpi ndnssqaagg thwsllvyfr dkkcfahyds
      121 hskcnsvhak qvagkleafl gkrggkatfv eekapaqqns ydcgmyvicn aealchgyfq
      181 grmepllqll tpsyitqkrs ewkalitkla qk
//
LOCUS       XP_041325270            1462 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-interleukin-16 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325270
VERSION     XP_041325270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1462
                     /product="pro-interleukin-16 isoform X1"
                     /calculated_mol_wt=157553
     Region          158..240
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(167..173,188,191,221,225,228..229)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          348..432
                     /region_name="PDZ3_PDZD2-PDZ1_hPro-IL-16-like"
                     /note="PDZ domain 3 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 1 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06759"
                     /db_xref="CDD:467240"
     Site            order(359..365,380,383,413,417,420..421)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467240"
     Region          482..571
                     /region_name="PDZ4_PDZD2-PDZ2_hPro-IL-16-like"
                     /note="PDZ domain 4 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 2 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06760"
                     /db_xref="CDD:467241"
     Site            order(497..503,517,520,550,554,557..558)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467241"
     Region          1243..1328
                     /region_name="PDZ6_PDZD2-PDZ3_hPro-IL-16-like"
                     /note="PDZ domain 6 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 3 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06762"
                     /db_xref="CDD:467243"
     Site            order(1255..1261,1274,1277,1307,1311,1314..1315)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467243"
     Region          1362..1447
                     /region_name="PDZ7_PDZD2-PDZ4_hPro-IL-16-like"
                     /note="PDZ domain 7 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 4 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06763"
                     /db_xref="CDD:467244"
     Site            order(1373..1379,1394,1397,1427,1431,1434..1435)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467244"
     CDS             1..1462
                     /gene="IL16"
                     /coded_by="XM_041469336.1:1..4389"
                     /db_xref="GeneID:121354597"
ORIGIN      
        1 mkrnsllqes glsalllifs tteaekttes imphkwendr kksssslkmd qksnpgnrks
       61 rkfrsisrsl ilcnaktsdd gsspdekcpd pfeistswgq edfdccpktq lpctseaeds
      121 ppdpphvvts ilqskaeane ncnnmrrkfl tkdscicrlc stsgnsssgi klsrsprcas
      181 fwkgltgshv paegpanrdg clsprdella lnvqslkdls rkeaeslipp ttrlvnimma
      241 hketptrker pleiqngflh gkaacqrtrs nstsasplwa galegpaprr aaplrdrqpp
      301 alhasrksls qqldcpagra paisrpsrsl staqlvhtsc gsqasvisni vlmkgqgkgl
      361 gfsivggkds iygpigiyvk tifpggaaaa dgrlqegdei lelngesmhg lthydalqkf
      421 kakkglltlt vrtsfstphs astcqspllc qslssstclt kenssfssen aafslnptkp
      481 ndrvimevtl nkepgvglgi glcsipyfqc isgifihtls pgsvahmdgr lrcgdeilei
      541 netsvqnttl nevyavlshc dpgavqiivs rhpepqvseq qlkeavaqav esnrfgkerh
      601 qwstegvkrl emswhgrqpc ekhmdrsvgc cshraqrlmt rsssdssynp rascapaavh
      661 qltdlkarvh svdvpitqqp gllysfsann sgrnspptcs eggralqntk ksseilvrkp
      721 ksskpkpppr kyfkqdctcd dqsnaarkek lvsevtasps ssvqqevgea vleghqtdvt
      781 qsvfttspta cdkehttaap vgrdqerkek lgtalssiqr pvlkrqarvd ysldttddpw
      841 vkisdciksl fnptmsennv hldlqpgtdk kkenqnrsss etvmkksese lvsskvlksd
      901 endsvkkgpp vapkptwfrq slkglrkans dlkpqadqsp pnhdsisskk lqsslsrvsp
      961 ggssikqris sfeslsapqs pektprrlsl kpsvqkepss paagaeaaaa csnqpllphr
     1021 enshqqppva matksldrss srresvarpe ktcseqssna stgssssflt pgavnshlvs
     1081 vakahslrsr sfpltaaqac eimkpfdekc skiysissqv ssalmksllc lpqspassgn
     1141 sawetldtvs qssmeedgts tppasenhhl dtgfslnlse lreytvslad kgkeedkpeq
     1201 gspqasgvlg qsvisllspe elaklieevk aldeetlkel ddihvtvlhk eedtglgfsl
     1261 aggidlenkv vtvhkvfpng lacqegtiqk gdevlsingk clkgathsda saimrqarqa
     1321 rqavvvtrks kdggknlnvs tssstssvas dasqesvtgd tictvtlekt saglgfsleg
     1381 gkgsiqgdkp iiinrifkgt aleqsspvqp gdellqvhtt amqgltrfea wnvikalpdg
     1441 pitaiikrkn rssvtskssk tl
//
LOCUS       XP_041325271            1453 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-interleukin-16 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325271
VERSION     XP_041325271.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469337.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1453
                     /product="pro-interleukin-16 isoform X2"
                     /calculated_mol_wt=156500
     Region          158..238
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cl49608"
                     /db_xref="CDD:483948"
     Site            order(167..173,188,191,221,225,228..229)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          340..424
                     /region_name="PDZ3_PDZD2-PDZ1_hPro-IL-16-like"
                     /note="PDZ domain 3 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 1 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06759"
                     /db_xref="CDD:467240"
     Site            order(351..357,372,375,405,409,412..413)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467240"
     Region          474..563
                     /region_name="PDZ4_PDZD2-PDZ2_hPro-IL-16-like"
                     /note="PDZ domain 4 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 2 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06760"
                     /db_xref="CDD:467241"
     Site            order(489..495,509,512,542,546,549..550)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467241"
     Region          1234..1319
                     /region_name="PDZ6_PDZD2-PDZ3_hPro-IL-16-like"
                     /note="PDZ domain 6 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 3 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06762"
                     /db_xref="CDD:467243"
     Site            order(1246..1252,1265,1268,1298,1302,1305..1306)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467243"
     Region          1353..1438
                     /region_name="PDZ7_PDZD2-PDZ4_hPro-IL-16-like"
                     /note="PDZ domain 7 of PDZ domain containing 2 (PDZD2),
                     PDZ domain 4 of human pro-interleukin-16 (isoform 1, 1332
                     AA), and related domains; cd06763"
                     /db_xref="CDD:467244"
     Site            order(1364..1370,1385,1388,1418,1422,1425..1426)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467244"
     CDS             1..1453
                     /gene="IL16"
                     /coded_by="XM_041469337.1:1..4362"
                     /db_xref="GeneID:121354597"
ORIGIN      
        1 mkrnsllqes glsalllifs tteaekttes imphkwendr kksssslkmd qksnpgnrks
       61 rkfrsisrsl ilcnaktsdd gsspdekcpd pfeistswgq edfdccpktq lpctseaeds
      121 ppdpphvvts ilqskaeane ncnnmrrkfl tkdscicrlc stsgnsssgi klsrsprcas
      181 fwkgltgshv paegpanrdg clsprdella lnvqslkdls rkeaeslipp ttrletptrk
      241 erpleiqngf lhgkaacqrt rsnstsaspl wagalegpap rraaplrdrq ppalhasrks
      301 lsqqldcpag rapaisrpsr slstaqlvht scgsqasvis nivlmkgqgk glgfsivggk
      361 dsiygpigiy vktifpggaa aadgrlqegd eilelngesm hglthydalq kfkakkgllt
      421 ltvrtsfstp hsastcqspl lcqslssstc ltkenssfss enaafslnpt kpndrvimev
      481 tlnkepgvgl giglcsipyf qcisgifiht lspgsvahmd grlrcgdeil einetsvqnt
      541 tlnevyavls hcdpgavqii vsrhpepqvs eqqlkeavaq avesnrfgke rhqwstegvk
      601 rlemswhgrq pcekhmdrsv gccshraqrl mtrsssdssy nprascapaa vhqltdlkar
      661 vhsvdvpitq qpgllysfsa nnsgrnsppt cseggralqn tkksseilvr kpksskpkpp
      721 prkyfkqdct cddqsnaark eklvsevtas psssvqevge avleghqtdv tqsvfttspt
      781 acdkehttaa pvgrdqerke klgtalssiq rpvlkrqarv dysldttddp wvkisdciks
      841 lfnptmsenn vhldlqpgtd kkkenqnrss setvmkkses elvsskvlks dendsvkkgp
      901 pvapkptwfr qslkglrkan sdlkpqadqs ppnhdsissk klqsslsrvs pggssikqri
      961 ssfeslsapq spektprrls lkpsvqkeps spaagaeaaa acsnqpllph renshqqppv
     1021 amatksldrs ssrresvarp ektcseqssn astgssssfl tpgavnshlv svakahslrs
     1081 rsfpltaaqa ceimkpfdek cskiysissq vssalmksll clpqspassg nsawetldtv
     1141 sqssmeedgt stppasenhh ldtgfslnls elreytvsla dkgkeedkpe qgspqasgvl
     1201 gqsvisllsp eelaklieev kaldeetlke lddihvtvlh keedtglgfs laggidlenk
     1261 vvtvhkvfpn glacqegtiq kgdevlsing kclkgathsd asaimrqarq arqavvvtrk
     1321 skdggknlnv stssstssva sdasqesvtg dtictvtlek tsaglgfsle ggkgsiqgdk
     1381 piiinrifkg taleqsspvq pgdellqvht tamqgltrfe awnvikalpd gpitaiikrk
     1441 nrssvtskss ktl
//
LOCUS       XP_041325272             315 aa            linear   VRT 06-MAY-2021
DEFINITION  CD276 antigen isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325272
VERSION     XP_041325272.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469338.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="CD276 antigen isoform X1"
                     /calculated_mol_wt=34534
     Region          19..133
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          33..37
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          51..55
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          96..100
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          110..115
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          128..131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          148..226
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          152..156
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409578"
     Region          166..170
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409578"
     Region          197..201
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409578"
     Region          208..213
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409578"
     Region          223..226
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409578"
     CDS             1..315
                     /gene="CD276"
                     /coded_by="XM_041469338.1:127..1074"
                     /db_xref="GeneID:121354598"
ORIGIN      
        1 mpfpllilal slagameiqv peepvvalfg hdatllcsfs pdanfsvael sliwqltdtk
       61 rlvhgfsggr drlqdqgrgy anrtalfydq lprgnvslll rrvriadegs ftcfvrvrdy
      121 nsaavalqva apyskpsvhl epskdlkpgd vaevtchasr gypeasvlwq dsrganltan
      181 vttwqvanee glfevrsvlr vlvepsvtys clvlnaalrq hghasvtitg qplafpaval
      241 wvtvalavcv vallgvlafv chqkirescr edeeragpee rdeegeepkt alqllentes
      301 regreqeqeq eqeid
//
LOCUS       XP_041325273             301 aa            linear   VRT 06-MAY-2021
DEFINITION  CD276 antigen isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325273
VERSION     XP_041325273.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469339.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..301
                     /product="CD276 antigen isoform X2"
                     /calculated_mol_wt=32951
     Region          19..133
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          33..37
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          51..55
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          96..100
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          110..115
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          128..131
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          148..226
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          152..156
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409578"
     Region          166..170
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409578"
     Region          197..201
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409578"
     Region          208..213
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409578"
     Region          223..226
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409578"
     CDS             1..301
                     /gene="CD276"
                     /coded_by="XM_041469339.1:127..1032"
                     /db_xref="GeneID:121354598"
ORIGIN      
        1 mpfpllilal slagameiqv peepvvalfg hdatllcsfs pdanfsvael sliwqltdtk
       61 rlvhgfsggr drlqdqgrgy anrtalfydq lprgnvslll rrvriadegs ftcfvrvrdy
      121 nsaavalqva apyskpsvhl epskdlkpgd vaevtchasr gypeasvlwq dsrganltan
      181 vttwqvanee glfevrsvlr vlvepsvtys clvlnaalrq hghasvtitg qplafpaval
      241 wvtvalavcv vallgvlafv chqkirescr edeeraalql lentesregr eqeqeqeqei
      301 d
//
LOCUS       XP_041325274            1203 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium/sodium hyperpolarization-activated cyclic
            nucleotide-gated channel 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325274
VERSION     XP_041325274.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469340.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1203
                     /product="potassium/sodium hyperpolarization-activated
                     cyclic nucleotide-gated channel 4"
                     /calculated_mol_wt=130504
     Region          174..>713
                     /region_name="PLN03192"
                     /note="Voltage-dependent potassium channel; Provisional"
                     /db_xref="CDD:215625"
     Region          568..676
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(632..633,642..644)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(664..666,670..672)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          <791..>1089
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     CDS             1..1203
                     /gene="HCN4"
                     /coded_by="XM_041469340.1:1..3612"
                     /db_xref="GeneID:121354600"
ORIGIN      
        1 mdklppsmrk rlyslpqqig pkasimdeed dsdkdtrrks irlkplpsps agstralggd
       61 pgrggdpgll eteaggkgak tstngdcrrf kgslssltsr hlhdaaeekr liggegepas
      121 pgedksppgs gkleqglpvp pppasppepq qpppracsst sikveggggc dqitpdeeqr
      181 lgqagfmqrq fgamlqpgvn kfslrmfgsq kavereqerv ksagfwiihp ysdfrfywdl
      241 tmlllmvgnl iiipvgitff kdenttpwiv fnvvsdtffl idlvlnfrtg ivvednteii
      301 ldpqrikmky lkswfvvdfi ssipvdyifl ivetridsev yktaralriv rftkilsllr
      361 llrlsrliry ihqweeifhm tydlasavvr ivnligmmll lchwdgclqf lvpmlqdfpd
      421 dcwvslnrmv ndswgkqysy alfkamshml cigygqqapv gmsdvwltml smivgatcya
      481 mfighatali qsldssrrqy qekykqveqy msfhklpadm rqrihdyyeh ryqgkmfdee
      541 silgelsepl reeiinfncr klvasmplfa nadpnfvtsm ltklkfevfq pgdyiiregt
      601 igkkmyfiqh gvvsvltkgn ketkladgsy fgeiclltrg rrtasvradt ycrlyslsvd
      661 nfnevleeyp mmrrafetva ldrldrigkk nsillhkvqh dlnsgvfnyq eneiiqqivq
      721 hdremahcah nvqaaaaaas tptpviwtpl iqaplqaaaa ttsvaialth hprlptaifr
      781 ppvsvlgslg qqpnqtprql krfqslipss agpsamgsps stpsqlhtpg aetpssssfh
      841 iqqlagfsaa aglgqfqvgs ppggsgqpgl sstssvglsq fhnapsgspl gaaqplqqqq
      901 qqqqqqqqqq qpalsssgfg hfqqatassp stsltqlssn sppsllnqfq pstrplqggq
      961 sqqlsgsgtl gglnhfqapp ssnspsssls qlaqasggps aglcqthpsa lgsltgtiaq
     1021 lhqerppfas asplqqpgia spcytpsgls ppsqspvatr tfqsgpagas gshgslllpq
     1081 pasppaqalp arlnqdikli sasqpslpqe laqtlgrhss phssresvss fspfpgggsg
     1141 llgkpcssip grvtlprqms sgslphplaf aagaaalaag grkesivltg dlepvrsklp
     1201 snl
//
LOCUS       XP_041325275             426 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325275
VERSION     XP_041325275.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469341.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="monoacylglycerol lipase ABHD2"
                     /calculated_mol_wt=47934
     Region          61..405
                     /region_name="YheT"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]; COG0429"
                     /db_xref="CDD:440198"
     CDS             1..426
                     /gene="ABHD2"
                     /coded_by="XM_041469341.1:185..1465"
                     /db_xref="GeneID:121354601"
ORIGIN      
        1 msailetsel pavfdgvkla avaavlyviv rclnlkspta ppeliyqdsa larfllkscp
       61 lltkeyippl iwgksghiqt alygkmgrvr sphpnglrky ltmpdgatat fdlfeprseh
      121 ctgedvtmvi cpgianhsek qyirtfvdya qkngyrcavl nhlgalpnie ltsprmftyg
      181 ctwefgamvn yikktypqtq livvgfslgg nivckylges qanqervlcc vslcqgysal
      241 raqetfmqwd hcrrfynflm adnmkkiils hrqvlfgdnn mkkpqslsda dlgklytats
      301 lmqiddnimr kfhgysslke yyeeesclhy lhriyvplll vnaaddplvh esllsipral
      361 sekkenvmhv lplhgghlgf fegsvlfpep ltwmdklvvq yanaicqwek tkphcseaeq
      421 avsgqe
//
LOCUS       XP_041325277             426 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325277
VERSION     XP_041325277.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469343.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="monoacylglycerol lipase ABHD2"
                     /calculated_mol_wt=47934
     Region          61..405
                     /region_name="YheT"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]; COG0429"
                     /db_xref="CDD:440198"
     CDS             1..426
                     /gene="ABHD2"
                     /coded_by="XM_041469343.1:146..1426"
                     /db_xref="GeneID:121354601"
ORIGIN      
        1 msailetsel pavfdgvkla avaavlyviv rclnlkspta ppeliyqdsa larfllkscp
       61 lltkeyippl iwgksghiqt alygkmgrvr sphpnglrky ltmpdgatat fdlfeprseh
      121 ctgedvtmvi cpgianhsek qyirtfvdya qkngyrcavl nhlgalpnie ltsprmftyg
      181 ctwefgamvn yikktypqtq livvgfslgg nivckylges qanqervlcc vslcqgysal
      241 raqetfmqwd hcrrfynflm adnmkkiils hrqvlfgdnn mkkpqslsda dlgklytats
      301 lmqiddnimr kfhgysslke yyeeesclhy lhriyvplll vnaaddplvh esllsipral
      361 sekkenvmhv lplhgghlgf fegsvlfpep ltwmdklvvq yanaicqwek tkphcseaeq
      421 avsgqe
//
LOCUS       XP_041325278             426 aa            linear   VRT 06-MAY-2021
DEFINITION  monoacylglycerol lipase ABHD2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325278
VERSION     XP_041325278.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469344.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="monoacylglycerol lipase ABHD2"
                     /calculated_mol_wt=47934
     Region          61..405
                     /region_name="YheT"
                     /note="Predicted hydrolase of the alpha/beta-hydrolase
                     fold [General function prediction only]; COG0429"
                     /db_xref="CDD:440198"
     CDS             1..426
                     /gene="ABHD2"
                     /coded_by="XM_041469344.1:112..1392"
                     /db_xref="GeneID:121354601"
ORIGIN      
        1 msailetsel pavfdgvkla avaavlyviv rclnlkspta ppeliyqdsa larfllkscp
       61 lltkeyippl iwgksghiqt alygkmgrvr sphpnglrky ltmpdgatat fdlfeprseh
      121 ctgedvtmvi cpgianhsek qyirtfvdya qkngyrcavl nhlgalpnie ltsprmftyg
      181 ctwefgamvn yikktypqtq livvgfslgg nivckylges qanqervlcc vslcqgysal
      241 raqetfmqwd hcrrfynflm adnmkkiils hrqvlfgdnn mkkpqslsda dlgklytats
      301 lmqiddnimr kfhgysslke yyeeesclhy lhriyvplll vnaaddplvh esllsipral
      361 sekkenvmhv lplhgghlgf fegsvlfpep ltwmdklvvq yanaicqwek tkphcseaeq
      421 avsgqe
//
LOCUS       XP_041325279             204 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor alpha-induced protein 8-like protein 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325279
VERSION     XP_041325279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="tumor necrosis factor alpha-induced protein
                     8-like protein 3"
                     /calculated_mol_wt=23329
     Region          43..202
                     /region_name="DUF758"
                     /note="Domain of unknown function (DUF758); pfam05527"
                     /db_xref="CDD:461672"
     CDS             1..204
                     /gene="TNFAIP8L3"
                     /coded_by="XM_041469345.1:72..686"
                     /db_xref="GeneID:121354602"
ORIGIN      
        1 mdsdsaelse gelvspagpd yfssknlalq aqkkilskma tktmanmlid dtsseifdel
       61 ykvtkehtrn kkeahkimkd likvaikigi lyrnnqfnqe eleivdkfrk klnqtamtiv
      121 sfyeveytfd rnvlaellne ckelvhelvg rhltarshgr inhvfnhfad veflsalysl
      181 dgdcrpylkk icnginklld ekvl
//
LOCUS       XP_041325280            1130 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Ie isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325280
VERSION     XP_041325280.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469346.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1130
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1130
                     /product="unconventional myosin-Ie isoform X1"
                     /calculated_mol_wt=128872
     Region          54..700
                     /region_name="MYSc_Myo1"
                     /note="class I myosin, motor domain; cd01378"
                     /db_xref="CDD:276829"
     Site            order(81..84,89,133..140,180..190,409..414)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276829"
     Site            order(81..84,89)
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276829"
     Site            133..140
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276829"
     Site            180..190
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276829"
     Site            409..414
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276829"
     Site            order(438..449,452..459,461)
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276829"
     Site            632..642
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276829"
     Site            order(644..670,687..700)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276829"
     Region          740..941
                     /region_name="Myosin_TH1"
                     /note="Unconventional myosin tail, actin- and
                     lipid-binding; pfam06017"
                     /db_xref="CDD:461801"
     Region          1078..1129
                     /region_name="SH3_MyoIe_If_like"
                     /note="Src homology 3 domain of Myosins Ie, If, and
                     similar proteins; cd11827"
                     /db_xref="CDD:212761"
     Site            order(1082,1084,1087,1091,1109..1110,1123,1125..1126)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212761"
     CDS             1..1130
                     /gene="MYO1E"
                     /coded_by="XM_041469346.1:3..3395"
                     /db_xref="GeneID:121354603"
ORIGIN      
        1 mlvssgrrnp vaggrqgvvq qqgskghyry hwqshnvkhs gvddmvllsk itedsivenl
       61 kkrymddyif tyigsvlisv npfkqmpyfg ekeiemyqga aqyenpphiy aladsmyrnm
      121 iidrenqcvi isgesgagkt vaakyimsyi skisgggpkv qhvkdiilqs nplleafgna
      181 ktvrnnnssr fgkyfeiqfs pggepdggki snflleksrv vmrnpgersf hifyqliega
      241 sseqksslgi tsmdyyyyls lsgsykvddi ddksdfretl hamsvigifa eeqalvlqiv
      301 agilhlgnis fkevgnyagv eseeflafpa fllginqdrl kekltsrqmd skwggksesi
      361 nvtlnveqac ytrdalakal hsrvfdylvd sinkamekdh eeynigvldi ygfeifqkng
      421 feqfcinfvn eklqqifiel tlkaeqeeyv qegirwtpie yfnnkivcdl ienkvnppgi
      481 msilddvcat mhavgegadq tllqklqmqi gthehfnswn qgfiihhyag kvsydmdgfc
      541 ernrdvlfmd lielmqssdl pfikalfpen lqvdkkgrpt tagskikkqa ndlvgtlmkc
      601 tphyircikp netkksrdwe esrvkhqvey lglkenirvr ragyayrrif kkflqryail
      661 tkatwpswkg eekqgvlhll qsvnmdpdqy qlgkskvfik apeslfllee mrerkydgya
      721 raiqkawrky aarkkyvqmr eeasdlllsk kerrrnsinr nfvgdyigme ehpelrqfvg
      781 krekidfadt vtkydrrfks vkrdlvltpk ciyligreki kqgpekgqvk evlkrrmeve
      841 rilsvslstm qddifilheq eydsllesvf kteflsllsk ryeektqqkl plkfsntlev
      901 klkkeswgpw ssagsrqvqf mqgqgdvail kpsnkvlqis igpglpknsr ptrrnlsqgr
      961 gyssrsqnqt ypmraapppp gqqqngvinp pqaaahpqip gnqwanqknl ytnmtrpalp
     1021 rqmsggsgki sqqpqsldfl kvpdqgaaga rrqsssrppp aggrpkpqpk pkpqvpqcra
     1081 lyaydaqdtd elsfnandvi diikedpsgw wtgrlrgkqg lfpnnyvtki
//
LOCUS       XP_041325281            1109 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Ie isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325281
VERSION     XP_041325281.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469347.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1109
                     /product="unconventional myosin-Ie isoform X2"
                     /calculated_mol_wt=126696
     Region          33..679
                     /region_name="MYSc_Myo1"
                     /note="class I myosin, motor domain; cd01378"
                     /db_xref="CDD:276829"
     Site            order(60..63,68,112..119,159..169,388..393)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276829"
     Site            order(60..63,68)
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276829"
     Site            112..119
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276829"
     Site            159..169
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276829"
     Site            388..393
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276829"
     Site            order(417..428,431..438,440)
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276829"
     Site            611..621
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276829"
     Site            order(623..649,666..679)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276829"
     Region          719..920
                     /region_name="Myosin_TH1"
                     /note="Unconventional myosin tail, actin- and
                     lipid-binding; pfam06017"
                     /db_xref="CDD:461801"
     Region          1057..1108
                     /region_name="SH3_MyoIe_If_like"
                     /note="Src homology 3 domain of Myosins Ie, If, and
                     similar proteins; cd11827"
                     /db_xref="CDD:212761"
     Site            order(1061,1063,1066,1070,1088..1089,1102,1104..1105)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212761"
     CDS             1..1109
                     /gene="MYO1E"
                     /coded_by="XM_041469347.1:95..3424"
                     /db_xref="GeneID:121354603"
ORIGIN      
        1 mgskghyryh wqshnvkhsg vddmvllski tedsivenlk krymddyift yigsvlisvn
       61 pfkqmpyfge keiemyqgaa qyenpphiya ladsmyrnmi idrenqcvii sgesgagktv
      121 aakyimsyis kisgggpkvq hvkdiilqsn plleafgnak tvrnnnssrf gkyfeiqfsp
      181 ggepdggkis nflleksrvv mrnpgersfh ifyqliegas seqksslgit smdyyyylsl
      241 sgsykvddid dksdfretlh amsvigifae eqalvlqiva gilhlgnisf kevgnyagve
      301 seeflafpaf llginqdrlk ekltsrqmds kwggksesin vtlnveqacy trdalakalh
      361 srvfdylvds inkamekdhe eynigvldiy gfeifqkngf eqfcinfvne klqqifielt
      421 lkaeqeeyvq egirwtpiey fnnkivcdli enkvnppgim silddvcatm havgegadqt
      481 llqklqmqig thehfnswnq gfiihhyagk vsydmdgfce rnrdvlfmdl ielmqssdlp
      541 fikalfpenl qvdkkgrptt agskikkqan dlvgtlmkct phyircikpn etkksrdwee
      601 srvkhqveyl glkenirvrr agyayrrifk kflqryailt katwpswkge ekqgvlhllq
      661 svnmdpdqyq lgkskvfika peslflleem rerkydgyar aiqkawrkya arkkyvqmre
      721 easdlllskk errrnsinrn fvgdyigmee hpelrqfvgk rekidfadtv tkydrrfksv
      781 krdlvltpkc iyligrekik qgpekgqvke vlkrrmever ilsvslstmq ddifilheqe
      841 ydsllesvfk teflsllskr yeektqqklp lkfsntlevk lkkeswgpws sagsrqvqfm
      901 qgqgdvailk psnkvlqisi gpglpknsrp trrnlsqgrg yssrsqnqty pmraappppg
      961 qqqngvinpp qaaahpqipg nqwanqknly tnmtrpalpr qmsggsgkis qqpqsldflk
     1021 vpdqgaagar rqsssrpppa ggrpkpqpkp kpqvpqcral yaydaqdtde lsfnandvid
     1081 iikedpsgww tgrlrgkqgl fpnnyvtki
//
LOCUS       XP_041325282             920 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Ie isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325282
VERSION     XP_041325282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="unconventional myosin-Ie isoform X3"
                     /calculated_mol_wt=106070
     Region          54..700
                     /region_name="MYSc_Myo1"
                     /note="class I myosin, motor domain; cd01378"
                     /db_xref="CDD:276829"
     Site            order(81..84,89,133..140,180..190,409..414)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276829"
     Site            order(81..84,89)
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276829"
     Site            133..140
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276829"
     Site            180..190
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276829"
     Site            409..414
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276829"
     Site            order(438..449,452..459,461)
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276829"
     Site            632..642
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276829"
     Site            order(644..670,687..700)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276829"
     Region          740..897
                     /region_name="Myosin_TH1"
                     /note="Unconventional myosin tail, actin- and
                     lipid-binding; pfam06017"
                     /db_xref="CDD:461801"
     CDS             1..920
                     /gene="MYO1E"
                     /coded_by="XM_041469348.1:3..2765"
                     /db_xref="GeneID:121354603"
ORIGIN      
        1 mlvssgrrnp vaggrqgvvq qqgskghyry hwqshnvkhs gvddmvllsk itedsivenl
       61 kkrymddyif tyigsvlisv npfkqmpyfg ekeiemyqga aqyenpphiy aladsmyrnm
      121 iidrenqcvi isgesgagkt vaakyimsyi skisgggpkv qhvkdiilqs nplleafgna
      181 ktvrnnnssr fgkyfeiqfs pggepdggki snflleksrv vmrnpgersf hifyqliega
      241 sseqksslgi tsmdyyyyls lsgsykvddi ddksdfretl hamsvigifa eeqalvlqiv
      301 agilhlgnis fkevgnyagv eseeflafpa fllginqdrl kekltsrqmd skwggksesi
      361 nvtlnveqac ytrdalakal hsrvfdylvd sinkamekdh eeynigvldi ygfeifqkng
      421 feqfcinfvn eklqqifiel tlkaeqeeyv qegirwtpie yfnnkivcdl ienkvnppgi
      481 msilddvcat mhavgegadq tllqklqmqi gthehfnswn qgfiihhyag kvsydmdgfc
      541 ernrdvlfmd lielmqssdl pfikalfpen lqvdkkgrpt tagskikkqa ndlvgtlmkc
      601 tphyircikp netkksrdwe esrvkhqvey lglkenirvr ragyayrrif kkflqryail
      661 tkatwpswkg eekqgvlhll qsvnmdpdqy qlgkskvfik apeslfllee mrerkydgya
      721 raiqkawrky aarkkyvqmr eeasdlllsk kerrrnsinr nfvgdyigme ehpelrqfvg
      781 krekidfadt vtkydrrfks vkrdlvltpk ciyligreki kqgpekgqvk evlkrrmeve
      841 rilsvslstm qddifilheq eydsllesvf kteflsllsk ryeektqqkl plkfsntwrn
      901 ykkqqrslil fgkgvegalk
//
LOCUS       XP_041325283            1205 aa            linear   VRT 06-MAY-2021
DEFINITION  unconventional myosin-Ie isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325283
VERSION     XP_041325283.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469349.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1205
                     /product="unconventional myosin-Ie isoform X4"
                     /calculated_mol_wt=136089
     Region          129..775
                     /region_name="MYSc_Myo1"
                     /note="class I myosin, motor domain; cd01378"
                     /db_xref="CDD:276829"
     Site            order(156..159,164,208..215,255..265,484..489)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276829"
     Site            order(156..159,164)
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276829"
     Site            208..215
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276829"
     Site            255..265
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276829"
     Site            484..489
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276829"
     Site            order(513..524,527..534,536)
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276829"
     Site            707..717
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276829"
     Site            order(719..745,762..775)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276829"
     Region          815..1016
                     /region_name="Myosin_TH1"
                     /note="Unconventional myosin tail, actin- and
                     lipid-binding; pfam06017"
                     /db_xref="CDD:461801"
     Region          1153..1204
                     /region_name="SH3_MyoIe_If_like"
                     /note="Src homology 3 domain of Myosins Ie, If, and
                     similar proteins; cd11827"
                     /db_xref="CDD:212761"
     Site            order(1157,1159,1162,1166,1184..1185,1198,1200..1201)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212761"
     CDS             1..1205
                     /gene="MYO1E"
                     /coded_by="XM_041469349.1:1..3618"
                     /db_xref="GeneID:121354603"
ORIGIN      
        1 mtsrraaigc aaasspfmdt spargslgpg pspppaptpr rpapgrwaar pgpapqgaar
       61 agraeplplp apppvppsrg agvsgqsrgq rspgtvlgsk ghyryhwqsh nvkhsgvddm
      121 vllskiteds ivenlkkrym ddyiftyigs vlisvnpfkq mpyfgekeie myqgaaqyen
      181 pphiyalads myrnmiidre nqcviisges gagktvaaky imsyiskisg ggpkvqhvkd
      241 iilqsnplle afgnaktvrn nnssrfgkyf eiqfspggep dggkisnfll eksrvvmrnp
      301 gersfhifyq liegasseqk sslgitsmdy yyylslsgsy kvddiddksd fretlhamsv
      361 igifaeeqal vlqivagilh lgnisfkevg nyagveseef lafpafllgi nqdrlkeklt
      421 srqmdskwgg ksesinvtln veqacytrda lakalhsrvf dylvdsinka mekdheeyni
      481 gvldiygfei fqkngfeqfc infvneklqq ifieltlkae qeeyvqegir wtpieyfnnk
      541 ivcdlienkv nppgimsild dvcatmhavg egadqtllqk lqmqigtheh fnswnqgfii
      601 hhyagkvsyd mdgfcernrd vlfmdlielm qssdlpfika lfpenlqvdk kgrpttagsk
      661 ikkqandlvg tlmkctphyi rcikpnetkk srdweesrvk hqveylglke nirvrragya
      721 yrrifkkflq ryailtkatw pswkgeekqg vlhllqsvnm dpdqyqlgks kvfikapesl
      781 flleemrerk ydgyaraiqk awrkyaarkk yvqmreeasd lllskkerrr nsinrnfvgd
      841 yigmeehpel rqfvgkreki dfadtvtkyd rrfksvkrdl vltpkciyli grekikqgpe
      901 kgqvkevlkr rmeverilsv slstmqddif ilheqeydsl lesvfktefl sllskryeek
      961 tqqklplkfs ntlevklkke swgpwssags rqvqfmqgqg dvailkpsnk vlqisigpgl
     1021 pknsrptrrn lsqgrgyssr sqnqtypmra appppgqqqn gvinppqaaa hpqipgnqwa
     1081 nqknlytnmt rpalprqmsg gsgkisqqpq sldflkvpdq gaagarrqss srpppaggrp
     1141 kpqpkpkpqv pqcralyayd aqdtdelsfn andvidiike dpsgwwtgrl rgkqglfpnn
     1201 yvtki
//
LOCUS       XP_041325284            1041 aa            linear   VRT 06-MAY-2021
DEFINITION  SAFB-like transcription modulator isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325284
VERSION     XP_041325284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1041
                     /product="SAFB-like transcription modulator isoform X1"
                     /calculated_mol_wt=117353
     Region          29..63
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <45..742
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          391..464
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     Region          807..>964
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1041
                     /gene="SLTM"
                     /coded_by="XM_041469350.1:506..3631"
                     /db_xref="GeneID:121354604"
ORIGIN      
        1 maaaasapaa aaagapaapa appteskris dlrvidlkse lkrrnlditg vktvliarlk
       61 qaieeeggdp dnieisvsad tptkkptkgk gkkqeadela gdasveedsf vkvikesele
      121 tqdasdqdgn delkdfresv edenlnskel psaekkryhd lepvettedv ekdsenqene
      181 gpdiedytfp avhdgedeen ekdkagsgdg tqevskplps eeslaeadht aheemeants
      241 vkeaeddnis vtiqaedait ldfdgddlle tgknvkitds easkpkdvqd tisqslekes
      301 kdyevtenhk dgkkedcvkg dpvkkeareg skkaesgdke kdtlkkgpss tgasgqakss
      361 tkeskesktt skddkgstss vsgssgsstr nlwvsglssn tkaadlknlf gkygkvlgak
      421 vvtnarspga kcygivtmss stevarciah lhrtelhgqq isvekvkgdp skkelkkesd
      481 eksssgrsig dkktassdka sktpstkkee kkseksekke sketkktegk deksdngtsg
      541 pnqestkkte ekkrisgksp gqvvvldqtk gdqghtrtvr rgrfdkpqil rnkeriiqek
      601 vkfreyrgrk dilpfekmke qrlrehmvrl erirravelr rrreiaerer rereririmh
      661 ereeclqrer erleierqkl erermererl erervrieqe rrkeaeriar ereelrrqqq
      721 qlryeqekrn slkrprdvdh rrddpywnes kkmaldtdar fghgsdysrq qnrfndfdhr
      781 ergrypesss vpsssfdrrd rfvnqgeakk trptarreep gferypktfs esrrneppqa
      841 rselrdtdrr evrgdrderr tviihdrpei phgrhpreta snpprqtnwk segsistdkr
      901 dgsnfyrger pdrsgrevsg hvrgappgsr ssasgyggre gergvmgerg ggqhynedrh
      961 vverhsretg prkewhgpss qgsgyhdtrr mgdgrggggm maphtsnssp inrvvqitgn
     1021 smqrgsgsgf kpfkggpprr f
//
LOCUS       XP_041325285            1038 aa            linear   VRT 06-MAY-2021
DEFINITION  SAFB-like transcription modulator isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325285
VERSION     XP_041325285.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469351.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1038
                     /product="SAFB-like transcription modulator isoform X2"
                     /calculated_mol_wt=117013
     Region          29..63
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <45..739
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          388..461
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     Region          804..>961
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1038
                     /gene="SLTM"
                     /coded_by="XM_041469351.1:506..3622"
                     /db_xref="GeneID:121354604"
ORIGIN      
        1 maaaasapaa aaagapaapa appteskris dlrvidlkse lkrrnlditg vktvliarlk
       61 qaieeeggdp dnieisvsad tptkkptkgk gkkqeadela gdasveedsf vkeseletqd
      121 asdqdgndel kdfresvede nlnskelpsa ekkryhdlep vettedvekd senqenegpd
      181 iedytfpavh dgedeenekd kagsgdgtqe vskplpsees laeadhtahe emeantsvke
      241 aeddnisvti qaedaitldf dgddlletgk nvkitdseas kpkdvqdtis qslekeskdy
      301 evtenhkdgk kedcvkgdpv kkearegskk aesgdkekdt lkkgpsstga sgqaksstke
      361 skeskttskd dkgstssvsg ssgsstrnlw vsglssntka adlknlfgky gkvlgakvvt
      421 narspgakcy givtmssste varciahlhr telhgqqisv ekvkgdpskk elkkesdeks
      481 ssgrsigdkk tassdkaskt pstkkeekks eksekkeske tkktegkdek sdngtsgpnq
      541 estkkteekk risgkspgqv vvldqtkgdq ghtrtvrrgr fdkpqilrnk eriiqekvkf
      601 reyrgrkdil pfekmkeqrl rehmvrleri rravelrrrr eiaererrer eririmhere
      661 eclqrererl eierqklere rmererlere rvrieqerrk eaeriarere elrrqqqqlr
      721 yeqekrnslk rprdvdhrrd dpywneskkm aldtdarfgh gsdysrqqnr fndfdhrerg
      781 rypesssvps ssfdrrdrfv nqgeakktrp tarreepgfe rypktfsesr rneppqarse
      841 lrdtdrrevr gdrderrtvi ihdrpeiphg rhpretasnp prqtnwkseg sistdkrdgs
      901 nfyrgerpdr sgrevsghvr gappgsrssa sgyggreger gvmgergggq hynedrhvve
      961 rhsretgprk ewhgpssqgs gyhdtrrmgd grggggmmap htsnsspinr vvqitgnsmq
     1021 rgsgsgfkpf kggpprrf
//
LOCUS       XP_041325286            1037 aa            linear   VRT 06-MAY-2021
DEFINITION  SAFB-like transcription modulator isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325286
VERSION     XP_041325286.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469352.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1037
                     /product="SAFB-like transcription modulator isoform X3"
                     /calculated_mol_wt=116842
     Region          29..63
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <45..742
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          391..464
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     Region          807..>960
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1037
                     /gene="SLTM"
                     /coded_by="XM_041469352.1:529..3642"
                     /db_xref="GeneID:121354604"
ORIGIN      
        1 maaaasapaa aaagapaapa appteskris dlrvidlkse lkrrnlditg vktvliarlk
       61 qaieeeggdp dnieisvsad tptkkptkgk gkkqeadela gdasveedsf vkvikesele
      121 tqdasdqdgn delkdfresv edenlnskel psaekkryhd lepvettedv ekdsenqene
      181 gpdiedytfp avhdgedeen ekdkagsgdg tqevskplps eeslaeadht aheemeants
      241 vkeaeddnis vtiqaedait ldfdgddlle tgknvkitds easkpkdvqd tisqslekes
      301 kdyevtenhk dgkkedcvkg dpvkkeareg skkaesgdke kdtlkkgpss tgasgqakss
      361 tkeskesktt skddkgstss vsgssgsstr nlwvsglssn tkaadlknlf gkygkvlgak
      421 vvtnarspga kcygivtmss stevarciah lhrtelhgqq isvekvkgdp skkelkkesd
      481 eksssgrsig dkktassdka sktpstkkee kkseksekke sketkktegk deksdngtsg
      541 pnqestkkte ekkrisgksp gqvvvldqtk gdqghtrtvr rgrfdkpqil rnkeriiqek
      601 vkfreyrgrk dilpfekmke qrlrehmvrl erirravelr rrreiaerer rereririmh
      661 ereeclqrer erleierqkl erermererl erervrieqe rrkeaeriar ereelrrqqq
      721 qlryeqekrn slkrprdvdh rrddpywnes kkmaldtdar fghgsdysrq qnrfndfdhr
      781 ergrypesss vpsssfdrrd rfvnqgeakk trptarreep gferypktfs esrrneppqa
      841 rselrdtdrr evrgdrderr tviihdrpei phgrhpreta snpprqtnwk segsistdkr
      901 dgrgerpdrs grevsghvrg appgsrssas gyggregerg vmgergggqh ynedrhvver
      961 hsretgprke whgpssqgsg yhdtrrmgdg rggggmmaph tsnsspinrv vqitgnsmqr
     1021 gsgsgfkpfk ggpprrf
//
LOCUS       XP_041325287            1034 aa            linear   VRT 06-MAY-2021
DEFINITION  SAFB-like transcription modulator isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325287
VERSION     XP_041325287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469353.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1034
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1034
                     /product="SAFB-like transcription modulator isoform X4"
                     /calculated_mol_wt=116501
     Region          29..63
                     /region_name="SAP"
                     /note="Putative DNA-binding (bihelical) motif predicted to
                     be involved in chromosomal organisation; smart00513"
                     /db_xref="CDD:128789"
     Region          <45..739
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          388..461
                     /region_name="RRM_SLTM"
                     /note="RNA recognition motif (RRM) found in Scaffold
                     attachment factor (SAF)-like transcription modulator
                     (SLTM) and similar proteins; cd12678"
                     /db_xref="CDD:410079"
     Region          804..>952
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     CDS             1..1034
                     /gene="SLTM"
                     /coded_by="XM_041469353.1:504..3608"
                     /db_xref="GeneID:121354604"
ORIGIN      
        1 maaaasapaa aaagapaapa appteskris dlrvidlkse lkrrnlditg vktvliarlk
       61 qaieeeggdp dnieisvsad tptkkptkgk gkkqeadela gdasveedsf vkeseletqd
      121 asdqdgndel kdfresvede nlnskelpsa ekkryhdlep vettedvekd senqenegpd
      181 iedytfpavh dgedeenekd kagsgdgtqe vskplpsees laeadhtahe emeantsvke
      241 aeddnisvti qaedaitldf dgddlletgk nvkitdseas kpkdvqdtis qslekeskdy
      301 evtenhkdgk kedcvkgdpv kkearegskk aesgdkekdt lkkgpsstga sgqaksstke
      361 skeskttskd dkgstssvsg ssgsstrnlw vsglssntka adlknlfgky gkvlgakvvt
      421 narspgakcy givtmssste varciahlhr telhgqqisv ekvkgdpskk elkkesdeks
      481 ssgrsigdkk tassdkaskt pstkkeekks eksekkeske tkktegkdek sdngtsgpnq
      541 estkkteekk risgkspgqv vvldqtkgdq ghtrtvrrgr fdkpqilrnk eriiqekvkf
      601 reyrgrkdil pfekmkeqrl rehmvrleri rravelrrrr eiaererrer eririmhere
      661 eclqrererl eierqklere rmererlere rvrieqerrk eaeriarere elrrqqqqlr
      721 yeqekrnslk rprdvdhrrd dpywneskkm aldtdarfgh gsdysrqqnr fndfdhrerg
      781 rypesssvps ssfdrrdrfv nqgeakktrp tarreepgfe rypktfsesr rneppqarse
      841 lrdtdrrevr gdrderrtvi ihdrpeiphg rhpretasnp prqtnwkseg sistdkrdgr
      901 gerpdrsgre vsghvrgapp gsrssasgyg gregergvmg ergggqhyne drhvverhsr
      961 etgprkewhg pssqgsgyhd trrmgdgrgg ggmmaphtsn sspinrvvqi tgnsmqrgsg
     1021 sgfkpfkggp prrf
//
LOCUS       XP_041325288             994 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325288
VERSION     XP_041325288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..994
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X1"
                     /calculated_mol_wt=107945
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <714..>850
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          930..990
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..994
                     /gene="RNF111"
                     /coded_by="XM_041469354.1:266..3250"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqqalpvdl sssgirshgs gafhgtsafd pccpgsssrt
      601 alyghqagag psqalaidgy gsgivaqpqp qpppqaslss crhymhspya sltrplhhqa
      661 sacphshgnp ppqpqpppqv dyviphpvhp fhpsisshas shpvpppppt hplanaaapi
      721 pqhlpathqp ishhipaaap paqrlhphev iqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat yppgplhphl ahyhapprlh
      841 hlqigalplm vpdmagyphi ryissgldgt sfrgpfrgnf eelihleerl gnvnrgatqg
      901 tierctyphk ykkvttdwfs qrklhckqdg eegteedtee kcticlsile egedvrrlpc
      961 mhlfhqvcvd qwlitnkkcp icrvdieaql pses
//
LOCUS       XP_041325289             994 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325289
VERSION     XP_041325289.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469355.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..994
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X1"
                     /calculated_mol_wt=107945
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <714..>850
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          930..990
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..994
                     /gene="RNF111"
                     /coded_by="XM_041469355.1:225..3209"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqqalpvdl sssgirshgs gafhgtsafd pccpgsssrt
      601 alyghqagag psqalaidgy gsgivaqpqp qpppqaslss crhymhspya sltrplhhqa
      661 sacphshgnp ppqpqpppqv dyviphpvhp fhpsisshas shpvpppppt hplanaaapi
      721 pqhlpathqp ishhipaaap paqrlhphev iqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat yppgplhphl ahyhapprlh
      841 hlqigalplm vpdmagyphi ryissgldgt sfrgpfrgnf eelihleerl gnvnrgatqg
      901 tierctyphk ykkvttdwfs qrklhckqdg eegteedtee kcticlsile egedvrrlpc
      961 mhlfhqvcvd qwlitnkkcp icrvdieaql pses
//
LOCUS       XP_041325291             993 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325291
VERSION     XP_041325291.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469357.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..993
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X2"
                     /calculated_mol_wt=107817
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <713..>849
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          929..989
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..993
                     /gene="RNF111"
                     /coded_by="XM_041469357.1:266..3247"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqalpvdls ssgirshgsg afhgtsafdp ccpgsssrta
      601 lyghqagagp sqalaidgyg sgivaqpqpq pppqaslssc rhymhspyas ltrplhhqas
      661 acphshgnpp pqpqpppqvd yviphpvhpf hpsisshass hpvpppppth planaaapip
      721 qhlpathqpi shhipaaapp aqrlhphevi qrmevqrrrm mqhptraher ppphphrmhp
      781 nyghghhihv pqtmsshprq apersawelg ieagvtaaty ppgplhphla hyhapprlhh
      841 lqigalplmv pdmagyphir yissgldgts frgpfrgnfe elihleerlg nvnrgatqgt
      901 ierctyphky kkvttdwfsq rklhckqdge egteedteek cticlsilee gedvrrlpcm
      961 hlfhqvcvdq wlitnkkcpi crvdieaqlp ses
//
LOCUS       XP_041325292             986 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325292
VERSION     XP_041325292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..986
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X3"
                     /calculated_mol_wt=106980
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <714..>850
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          922..982
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..986
                     /gene="RNF111"
                     /coded_by="XM_041469358.1:266..3226"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqqalpvdl sssgirshgs gafhgtsafd pccpgsssrt
      601 alyghqagag psqalaidgy gsgivaqpqp qpppqaslss crhymhspya sltrplhhqa
      661 sacphshgnp ppqpqpppqv dyviphpvhp fhpsisshas shpvpppppt hplanaaapi
      721 pqhlpathqp ishhipaaap paqrlhphev iqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat yppgplhphl ahyhapprlh
      841 hlqigalplm vpdmagyphi ryissgldgt sfrgpfrgnf eelihleerl gnvnrgatqg
      901 tierctyphk ykkrklhckq dgeegteedt eekcticlsi leegedvrrl pcmhlfhqvc
      961 vdqwlitnkk cpicrvdiea qlpses
//
LOCUS       XP_041325293             985 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325293
VERSION     XP_041325293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469359.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..985
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X4"
                     /calculated_mol_wt=106852
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <713..>849
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          921..981
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..985
                     /gene="RNF111"
                     /coded_by="XM_041469359.1:266..3223"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqalpvdls ssgirshgsg afhgtsafdp ccpgsssrta
      601 lyghqagagp sqalaidgyg sgivaqpqpq pppqaslssc rhymhspyas ltrplhhqas
      661 acphshgnpp pqpqpppqvd yviphpvhpf hpsisshass hpvpppppth planaaapip
      721 qhlpathqpi shhipaaapp aqrlhphevi qrmevqrrrm mqhptraher ppphphrmhp
      781 nyghghhihv pqtmsshprq apersawelg ieagvtaaty ppgplhphla hyhapprlhh
      841 lqigalplmv pdmagyphir yissgldgts frgpfrgnfe elihleerlg nvnrgatqgt
      901 ierctyphky kkrklhckqd geegteedte ekcticlsil eegedvrrlp cmhlfhqvcv
      961 dqwlitnkkc picrvdieaq lpses
//
LOCUS       XP_041325294             963 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325294
VERSION     XP_041325294.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469360.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..963
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X5"
                     /calculated_mol_wt=104518
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <714..>852
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          899..959
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..963
                     /gene="RNF111"
                     /coded_by="XM_041469360.1:266..3157"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqqalpvdl sssgirshgs gafhgtsafd pccpgsssrt
      601 alyghqagag psqalaidgy gsgivaqpqp qpppqaslss crhymhspya sltrplhhqa
      661 sacphshgnp ppqpqpppqv dyviphpvhp fhpsisshas shpvpppppt hplanaaapi
      721 pqhlpathqp ishhipaaap paqrlhphev iqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat yppgplhphl ahyhapprlh
      841 hlqigalplm elihleerlg nvnrgatqgt ierctyphky kkvttdwfsq rklhckqdge
      901 egteedteek cticlsilee gedvrrlpcm hlfhqvcvdq wlitnkkcpi crvdieaqlp
      961 ses
//
LOCUS       XP_041325295             955 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325295
VERSION     XP_041325295.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469361.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..955
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X6"
                     /calculated_mol_wt=103553
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <714..>852
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          891..951
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..955
                     /gene="RNF111"
                     /coded_by="XM_041469361.1:266..3133"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqqalpvdl sssgirshgs gafhgtsafd pccpgsssrt
      601 alyghqagag psqalaidgy gsgivaqpqp qpppqaslss crhymhspya sltrplhhqa
      661 sacphshgnp ppqpqpppqv dyviphpvhp fhpsisshas shpvpppppt hplanaaapi
      721 pqhlpathqp ishhipaaap paqrlhphev iqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat yppgplhphl ahyhapprlh
      841 hlqigalplm elihleerlg nvnrgatqgt ierctyphky kkrklhckqd geegteedte
      901 ekcticlsil eegedvrrlp cmhlfhqvcv dqwlitnkkc picrvdieaq lpses
//
LOCUS       XP_041325296             994 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase Arkadia isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325296
VERSION     XP_041325296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..994
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..994
                     /product="E3 ubiquitin-protein ligase Arkadia isoform X1"
                     /calculated_mol_wt=107945
     Region          18..291
                     /region_name="RNF111_N"
                     /note="E3 ubiquitin-protein ligase Arkadia N-terminus;
                     pfam15303"
                     /db_xref="CDD:464629"
     Region          <714..>850
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     Region          930..990
                     /region_name="RING-H2_RNF111"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 111 (RNF111) and similar proteins; cd16681"
                     /db_xref="CDD:438343"
     CDS             1..994
                     /gene="RNF111"
                     /coded_by="XM_041469362.1:285..3269"
                     /db_xref="GeneID:121354606"
ORIGIN      
        1 mskwtpecni vytlkadmks evpseapkrq eslkgillnp epigaaksft aevemiaskv
       61 gnefshlcgd sqkqkdmngn htdqekgivv rkkrksqqag psytqncpdk enkgilglrq
      121 hletqsednd ssfsdcissp ssslhfgdsd tvtsdeekda pvrhpqavln apsrthsars
      181 qkwprteads vpgllmkrpc fhnsslrrlp yrkravktss sqrtqnqker ilmqrkkrev
      241 larrkyallp ssssssendl stesssssst egeedlfvsp genhqnstav psgsidedvv
      301 vieasstpqv taneeinvts tdseveivtv genyrsrsal ghsrshwgps ssshgarppe
      361 qrsrsrvstv iqplrtqsaa evvdltvded eptvvpttsa rvepqavssa sttssststs
      421 eqasdaapsv stsqpsaape ttpslpsgst agtsagdeir raasnstlet gppamprlps
      481 ccpqhspcgg psqthhalgh phtscfqqhg hhfqhdhhhh hnphpavpls psfsdsscpv
      541 erpppvpapc gassssgtsy heqqalpvdl sssgirshgs gafhgtsafd pccpgsssrt
      601 alyghqagag psqalaidgy gsgivaqpqp qpppqaslss crhymhspya sltrplhhqa
      661 sacphshgnp ppqpqpppqv dyviphpvhp fhpsisshas shpvpppppt hplanaaapi
      721 pqhlpathqp ishhipaaap paqrlhphev iqrmevqrrr mmqhptrahe rppphphrmh
      781 pnyghghhih vpqtmsshpr qapersawel gieagvtaat yppgplhphl ahyhapprlh
      841 hlqigalplm vpdmagyphi ryissgldgt sfrgpfrgnf eelihleerl gnvnrgatqg
      901 tierctyphk ykkvttdwfs qrklhckqdg eegteedtee kcticlsile egedvrrlpc
      961 mhlfhqvcvd qwlitnkkcp icrvdieaql pses
//
LOCUS       XP_041325297             551 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin carboxyl-terminal hydrolase MINDY-2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325297
VERSION     XP_041325297.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469363.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="ubiquitin carboxyl-terminal hydrolase MINDY-2"
                     /calculated_mol_wt=59544
     Region          213..330
                     /region_name="MINDY_DUB"
                     /note="MINDY deubiquitinase; pfam04424"
                     /db_xref="CDD:461303"
     CDS             1..551
                     /gene="MINDY2"
                     /coded_by="XM_041469363.1:123..1778"
                     /db_xref="GeneID:121354607"
ORIGIN      
        1 meslaqpppp pgslqtgggg aasrlrlgea aadeggcrea eegggrrsps pppapapaaa
       61 pqtaspsraa egaaaaegag lavpespgaa pasesapaga gsgssgapsp pgeesrslds
      121 lesfsnlhsc cpssselnsd adeavvagas sggpapepeg drpaagsqll saskerfpgq
      181 svyhikwvrw keentpvitq nengpcplla imnvlllawk iklppmmeii taeqlmeylg
      241 dyildakpke iseiqrlnye qnmsdamail hklqtgldvn vkftgvrvfe ytpecivfdl
      301 ldiplyhgwl vdpqvadivk avgncsynql vekiisckqs enselvsegf vaeqflnnta
      361 tqltyhglce ltsavqegel cvffrnnhfs tmtkykgqly llvtdqgflt eekvvweslh
      421 nvdgdgnfcd sefhlrppsd petvyrgqqd qidqdylmal slqqeqqnqe inweqipegi
      481 sdlelakklq eeedrrasqy yqeqeqaaaq vqqvqgaasp astrqsgsne rkrkepreke
      541 rekeknscvl l
//
LOCUS       XP_041325298             401 aa            linear   VRT 06-MAY-2021
DEFINITION  G2/mitotic-specific cyclin-B2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325298
VERSION     XP_041325298.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469364.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="G2/mitotic-specific cyclin-B2"
                     /calculated_mol_wt=45036
     Region          133..265
                     /region_name="CYCLIN_SF"
                     /note="Cyclin box fold superfamily; cl40454"
                     /db_xref="CDD:477360"
     Region          270..388
                     /region_name="CYCLIN_CCNB2_rpt2"
                     /note="second cyclin box found in G2/mitotic-specific
                     cyclin-B2 (CCNB2) and similar proteins; cd20570"
                     /db_xref="CDD:410273"
     CDS             1..401
                     /gene="CCNB2"
                     /coded_by="XM_041469364.1:441..1646"
                     /db_xref="GeneID:121354608"
ORIGIN      
        1 malpvtrrap itrgmenavs dlrskakthv tgkraaleei gnkvttrgth iskktecpka
       61 sikpvkgpsk mtngivlpka paavnqanke tgvpkvlspv pmdvsmqeed lcqafsdvll
      121 nnvedidaed wenpqlcsdy vkdiylylre lelqqsvrph yldgrtingr mrailvdwlv
      181 qvhsrfrllq etlymcvaii drflqshpvp rkklqlvgvt allvaskyee ilspdvadfv
      241 yitdnaytsn eiremeiiil kelnfdlgrp lpihflrras kageadakqh tlakylmelt
      301 lidydmvhhr pseiaaaalc lsqkilghnk wgtkqqyytg yaedslvmtm khmaknvvki
      361 nekltkynai knkyasskll tistipqlns eiikdlaasl l
//
LOCUS       XP_041325299            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  fanconi-associated nuclease 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325299
VERSION     XP_041325299.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469365.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="fanconi-associated nuclease 1 isoform X1"
                     /calculated_mol_wt=116523
     Region          <36..>131
                     /region_name="rad18"
                     /note="DNA repair protein rad18; TIGR00599"
                     /db_xref="CDD:273165"
     Region          57..78
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          397..1045
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     Site            order(397..398,444,448..449,457,460,497..499,516..518,595,
                     598..600,603,642,694,697,700..701,703,728,732,735,
                     739..740,764,771,774,816..817,980,1008,1010,1014)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411730"
     CDS             1..1045
                     /gene="FAN1"
                     /coded_by="XM_041469365.1:184..3321"
                     /db_xref="GeneID:121354610"
ORIGIN      
        1 maearssgik rsrislslsk nkkkkettkk vevtgipstp saspsitsff nnappakvsc
       61 pmcgqlvpry ginkhidetc qrnrgetgai datlnsfwnk sppaanlsnn sssyfsknfs
      121 nletspsksn llkaggsaaq qtspyfskng svfsvnnesq artvrtvslg slsaklsrrc
      181 sqqggkqvly eesnssppav hsasaaapdd dddggeidaa qssqkenqps qrehqeqhfp
      241 kreseiqnei nkcnreefvd mvqvqlladn sddkrfpsct rstkaessse ggtlspdkfe
      301 tslathtsae ltsnlemetq phtevtpskt evnggtencc srddaevlpv evledfkndm
      361 nhtlletvek tesqdstgdi ldkidevlsv psspghpyyl qnflvvlrav lqneddvrlf
      421 neqdlniitk fyklsvagqk lyvrlfqrkl nwlkvnkiey eeisvdlspi ieelaearfl
      481 qteseledlc egldllsape lktlakifhl pnpngqkqql vddflklskq rsifsrsqag
      541 igtvilkrvk elagkcvrvc rgaravfsri lllfslpesl eeeeagsagq gllstvlran
      601 mghmvfpsyt vnrktqvfqd redliryata vhlsndiata mvngnweean nlylyaketw
      661 selknhpsls yhrvlpdylr rftvgwvytr ilsqgveilq rlhkykeavq qlqsllaqdv
      721 ycadsrgrww drlalnlhqh lkntkkaigc irrgladpav rtghrlslcq ralrirdsps
      781 ckqfqgllqd lplltvqdvt hvtisgkmcp qagmgksvfl medigdgegg qdcsvstvmc
      841 sveelalthy rrngfdqgih gegstfitly gilmwdiifm ddipdvfrns yqtspldlyt
      901 dsfyenrrav iearlqqlht assetlaelv advwttqegk aaalvnwgrf islqqvqslv
      961 sclggtflsg vfrrlsrdlr hcrgglpdll vwrshsrhfk lvevkgpndr lspkqmlwls
     1021 elhklgaave vchvqdvggk skrls
//
LOCUS       XP_041325300            1045 aa            linear   VRT 06-MAY-2021
DEFINITION  fanconi-associated nuclease 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325300
VERSION     XP_041325300.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469366.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1045
                     /product="fanconi-associated nuclease 1 isoform X1"
                     /calculated_mol_wt=116523
     Region          <36..>131
                     /region_name="rad18"
                     /note="DNA repair protein rad18; TIGR00599"
                     /db_xref="CDD:273165"
     Region          57..78
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          397..1045
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     Site            order(397..398,444,448..449,457,460,497..499,516..518,595,
                     598..600,603,642,694,697,700..701,703,728,732,735,
                     739..740,764,771,774,816..817,980,1008,1010,1014)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:411730"
     CDS             1..1045
                     /gene="FAN1"
                     /coded_by="XM_041469366.1:184..3321"
                     /db_xref="GeneID:121354610"
ORIGIN      
        1 maearssgik rsrislslsk nkkkkettkk vevtgipstp saspsitsff nnappakvsc
       61 pmcgqlvpry ginkhidetc qrnrgetgai datlnsfwnk sppaanlsnn sssyfsknfs
      121 nletspsksn llkaggsaaq qtspyfskng svfsvnnesq artvrtvslg slsaklsrrc
      181 sqqggkqvly eesnssppav hsasaaapdd dddggeidaa qssqkenqps qrehqeqhfp
      241 kreseiqnei nkcnreefvd mvqvqlladn sddkrfpsct rstkaessse ggtlspdkfe
      301 tslathtsae ltsnlemetq phtevtpskt evnggtencc srddaevlpv evledfkndm
      361 nhtlletvek tesqdstgdi ldkidevlsv psspghpyyl qnflvvlrav lqneddvrlf
      421 neqdlniitk fyklsvagqk lyvrlfqrkl nwlkvnkiey eeisvdlspi ieelaearfl
      481 qteseledlc egldllsape lktlakifhl pnpngqkqql vddflklskq rsifsrsqag
      541 igtvilkrvk elagkcvrvc rgaravfsri lllfslpesl eeeeagsagq gllstvlran
      601 mghmvfpsyt vnrktqvfqd redliryata vhlsndiata mvngnweean nlylyaketw
      661 selknhpsls yhrvlpdylr rftvgwvytr ilsqgveilq rlhkykeavq qlqsllaqdv
      721 ycadsrgrww drlalnlhqh lkntkkaigc irrgladpav rtghrlslcq ralrirdsps
      781 ckqfqgllqd lplltvqdvt hvtisgkmcp qagmgksvfl medigdgegg qdcsvstvmc
      841 sveelalthy rrngfdqgih gegstfitly gilmwdiifm ddipdvfrns yqtspldlyt
      901 dsfyenrrav iearlqqlht assetlaelv advwttqegk aaalvnwgrf islqqvqslv
      961 sclggtflsg vfrrlsrdlr hcrgglpdll vwrshsrhfk lvevkgpndr lspkqmlwls
     1021 elhklgaave vchvqdvggk skrls
//
LOCUS       XP_041325301             873 aa            linear   VRT 06-MAY-2021
DEFINITION  fanconi-associated nuclease 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325301
VERSION     XP_041325301.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469367.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..873
                     /product="fanconi-associated nuclease 1 isoform X2"
                     /calculated_mol_wt=97008
     Region          <36..>131
                     /region_name="rad18"
                     /note="DNA repair protein rad18; TIGR00599"
                     /db_xref="CDD:273165"
     Region          57..78
                     /region_name="ZnF_Rad18"
                     /note="Rad18-like CCHC zinc finger; smart00734"
                     /db_xref="CDD:128973"
     Region          397..>758
                     /region_name="FAN1-like"
                     /note="repair nuclease FAN1; cd22326"
                     /db_xref="CDD:411730"
     CDS             1..873
                     /gene="FAN1"
                     /coded_by="XM_041469367.1:184..2805"
                     /db_xref="GeneID:121354610"
ORIGIN      
        1 maearssgik rsrislslsk nkkkkettkk vevtgipstp saspsitsff nnappakvsc
       61 pmcgqlvpry ginkhidetc qrnrgetgai datlnsfwnk sppaanlsnn sssyfsknfs
      121 nletspsksn llkaggsaaq qtspyfskng svfsvnnesq artvrtvslg slsaklsrrc
      181 sqqggkqvly eesnssppav hsasaaapdd dddggeidaa qssqkenqps qrehqeqhfp
      241 kreseiqnei nkcnreefvd mvqvqlladn sddkrfpsct rstkaessse ggtlspdkfe
      301 tslathtsae ltsnlemetq phtevtpskt evnggtencc srddaevlpv evledfkndm
      361 nhtlletvek tesqdstgdi ldkidevlsv psspghpyyl qnflvvlrav lqneddvrlf
      421 neqdlniitk fyklsvagqk lyvrlfqrkl nwlkvnkiey eeisvdlspi ieelaearfl
      481 qteseledlc egldllsape lktlakifhl pnpngqkqql vddflklskq rsifsrsqag
      541 igtvilkrvk elagkcvrvc rgaravfsri lllfslpesl eeeeagsagq gllstvlran
      601 mghmvfpsyt vnrktqvfqd redliryata vhlsndiata mvngnweean nlylyaketw
      661 selknhpsls yhrvlpdylr rftvgwvytr ilsqgveilq rlhkykeavq qlqsllaqdv
      721 ycadsrgrww drlalnlhqh lkntkkaigc irrgladpcr glsellcvpf farpsaasgg
      781 gwqtrpcapg tacpcasapc asgtrpaass sraccrtcpc spcrmslmlq svercvlrre
      841 wenlcfswri lvmekeakta vypqscaqlr swh
//
LOCUS       XP_041325302             768 aa            linear   VRT 06-MAY-2021
DEFINITION  myotubularin-related protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041325302
VERSION     XP_041325302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469368.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..768
                     /product="myotubularin-related protein 10"
                     /calculated_mol_wt=88011
     Region          19..195
                     /region_name="PH-GRAM_MTMR10"
                     /note="Myotubularian (MTM) related 10 protein (MTMR10)
                     Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase
                     activators and Myotubularins (PH-GRAM) domain; cd13346"
                     /db_xref="CDD:270154"
     Region          271..464
                     /region_name="PTP-MTMR10"
                     /note="protein tyrosine phosphatase-like pseudophosphatase
                     domain of myotubularin related phosphoinositide
                     phosphatase 10; cd14593"
                     /db_xref="CDD:350441"
     Region          566..697
                     /region_name="3-PAP"
                     /note="Myotubularin-associated protein; pfam12578"
                     /db_xref="CDD:463634"
     CDS             1..768
                     /gene="MTMR10"
                     /coded_by="XM_041469368.1:264..2570"
                     /db_xref="GeneID:121354611"
ORIGIN      
        1 mfslkqpkpt fksyllpqad dniaseprik klepvllpge ivvnevnfvr kciatdtsqy
       61 dlwgklvctn fkisfitddp mplqkfhykn lllgehdvpl tcieqivtvn dtkrkqkvlg
      121 pnqklkfnpt eliiyckdfr ivrfrfdeag pesakkvcla iahysqptdl qllfafeyvg
      181 eiyhnpakkv ngidpggggg gissasgqqt plfetysdwd reikrtgase wrvcsvnegy
      241 mistclpeyf vvpssladqd lklysysfig rrmplwswnh pngsalvrma nikdvlqqrr
      301 idqricnait rshplrsdvy ksdldkclpn iqeiqaahnk lkqlcvndpf deteekwlss
      361 lentrwleyi raflkhsael vymmeckhls vvlqeeegrd lsclaasliq vmldpyfrti
      421 vgfqsliqke wvmagyqfld rcnhlkrsdk esplflmfld cvwqlleqyp aafefsevyl
      481 tilydsaris lfgtflfncp hqrvkestef aiskniqlgd ekglrfpcvw dwslqftsrd
      541 rllfhnplyi gkstpsvhng alrsfkrskk nysstlrgvp paikngiige qeflprrnsl
      601 ilklkpeffq saegqshsme qyfrdwfakp vdlhgvilph lsgtqiklwk lcyfrwvpea
      661 qinhggsita fhrvsllade vdmlnrslrq yksnsslqgh cseldqsrmy franglndts
      721 gtpdflsssf pfspvgnlcr rsilgtplsk flsgakiwls tetlaned
//
LOCUS       XP_041325304             460 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 13 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325304
VERSION     XP_041325304.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469370.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..460
                     /product="kelch repeat and BTB domain-containing protein
                     13 isoform X1"
                     /calculated_mol_wt=51706
     Region          13..95
                     /region_name="BTB_POZ_KBTBD13"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch repeat
                     and BTB domain-containing protein 13 (KBTBD13); cd18320"
                     /db_xref="CDD:349629"
     Region          107..195
                     /region_name="BACK_KBTBD13"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 13
                     (KBTBD13); cd18486"
                     /db_xref="CDD:350561"
     Region          188..415
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          210..252
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          256..300
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          303..345
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          348..391
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..460
                     /gene="KBTBD13"
                     /coded_by="XM_041469370.1:110..1492"
                     /db_xref="GeneID:121354613"
ORIGIN      
        1 mtpeeegsqa gppervrirv eeqsfsveks llvesseyfr alfrsgmres tqeeiglgel
       61 saagflamlr vlagerpilg seetfqavec aaflqvkpla kylihsinsd ncillyqaaa
      121 ifglldlfhc aalyirdsya eleeyldcls ddllayveal lpstfvavga htptfefled
      181 lsrticylde dtntwrtlsc lplsastfla gmatmdnkiy ivggvygank qvvessfcyd
      241 adanawsqfp sphqlrydvr lvghegylya iggeyekisl ksverydlas stwtfvsdlp
      301 qpstaapcaq algqifvclw qpldttviye yetqqdawlp vtelkrhqsy ghcmvahrdn
      361 lyvmrngpyd dflrcvidcf nltsrqwsal pgqfmnskga lftavvrgdt iytvnkmltl
      421 lysveeetwk qkkeragfpr sgslqtfllr lprrdhdiat
//
LOCUS       XP_041325305             380 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch repeat and BTB domain-containing protein 13 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325305
VERSION     XP_041325305.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469371.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="kelch repeat and BTB domain-containing protein
                     13 isoform X2"
                     /calculated_mol_wt=42822
     Region          27..115
                     /region_name="BACK_KBTBD13"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch repeat and BTB domain-containing protein 13
                     (KBTBD13); cd18486"
                     /db_xref="CDD:350561"
     Region          108..335
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          130..172
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          176..220
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          223..265
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          268..311
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..380
                     /gene="KBTBD13"
                     /coded_by="XM_041469371.1:112..1254"
                     /db_xref="GeneID:121354613"
ORIGIN      
        1 mtpeeegsqa gppervkpla kylihsinsd ncillyqaaa ifglldlfhc aalyirdsya
       61 eleeyldcls ddllayveal lpstfvavga htptfefled lsrticylde dtntwrtlsc
      121 lplsastfla gmatmdnkiy ivggvygank qvvessfcyd adanawsqfp sphqlrydvr
      181 lvghegylya iggeyekisl ksverydlas stwtfvsdlp qpstaapcaq algqifvclw
      241 qpldttviye yetqqdawlp vtelkrhqsy ghcmvahrdn lyvmrngpyd dflrcvidcf
      301 nltsrqwsal pgqfmnskga lftavvrgdt iytvnkmltl lysveeetwk qkkeragfpr
      361 sgslqtfllr lprrdhdiat
//
LOCUS       XP_041325306             443 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-associated protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325306
VERSION     XP_041325306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..443
                     /product="ubiquitin-associated protein 1-like"
                     /calculated_mol_wt=48925
     Region          403..439
                     /region_name="UBA2_UBAP1_like"
                     /note="UBA2 domain found in ubiquitin-associated protein 1
                     (UBAP-1) and similar proteins; cd14316"
                     /db_xref="CDD:270501"
     Site            order(422,425..426)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270501"
     CDS             1..443
                     /gene="UBAP1L"
                     /coded_by="XM_041469372.1:163..1494"
                     /db_xref="GeneID:121354614"
ORIGIN      
        1 mnyldevpfr tamslsgdse geiplvtapd ielpdctdil mstmhdfsle rkvlywveva
       61 sqqqtsrhrv tsevvptapp cwlllvdpad syggrsrdga vrrsislsaa dssyghakgr
      121 avlsdtesdt whseegeysd deysstswee ndkdemllsr rrssarsvss rpgcyqtrpk
      181 tspgllepsp ennvhspasp dpskqrrsmv ifnnmknele aarrklaalv hplnraaags
      241 rgipvprllp qcpstnhsvk ygpdpdvsqq gtvvptppat ttpiphikqh kptvpslspy
      301 tclppastpg rplschrsqp dssadllsal sqeerdliep vialgyptqk ailtlqktgr
      361 qslsqflsyl gacdrllkqg yeegqveeam emfqysekka aeflhllaqf ndmgfqqnei
      421 kevlllcgnq reraleelvm ksh
//
LOCUS       XP_041325307             443 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-associated protein 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325307
VERSION     XP_041325307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..443
                     /product="ubiquitin-associated protein 1-like"
                     /calculated_mol_wt=48925
     Region          403..439
                     /region_name="UBA2_UBAP1_like"
                     /note="UBA2 domain found in ubiquitin-associated protein 1
                     (UBAP-1) and similar proteins; cd14316"
                     /db_xref="CDD:270501"
     Site            order(422,425..426)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270501"
     CDS             1..443
                     /gene="UBAP1L"
                     /coded_by="XM_041469373.1:128..1459"
                     /db_xref="GeneID:121354614"
ORIGIN      
        1 mnyldevpfr tamslsgdse geiplvtapd ielpdctdil mstmhdfsle rkvlywveva
       61 sqqqtsrhrv tsevvptapp cwlllvdpad syggrsrdga vrrsislsaa dssyghakgr
      121 avlsdtesdt whseegeysd deysstswee ndkdemllsr rrssarsvss rpgcyqtrpk
      181 tspgllepsp ennvhspasp dpskqrrsmv ifnnmknele aarrklaalv hplnraaags
      241 rgipvprllp qcpstnhsvk ygpdpdvsqq gtvvptppat ttpiphikqh kptvpslspy
      301 tclppastpg rplschrsqp dssadllsal sqeerdliep vialgyptqk ailtlqktgr
      361 qslsqflsyl gacdrllkqg yeegqveeam emfqysekka aeflhllaqf ndmgfqqnei
      421 kevlllcgnq reraleelvm ksh
//
LOCUS       XP_041325308             305 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-like protein family member 12 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325308
VERSION     XP_041325308.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469374.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="ras-like protein family member 12 isoform X1"
                     /calculated_mol_wt=33888
     Region          58..221
                     /region_name="RERG_RasL11_like"
                     /note="Ras-related and Estrogen-Regulated Growth inhibitor
                     (RERG) and Ras-like 11 (RasL11)-like families; cd04146"
                     /db_xref="CDD:206713"
     Site            63..70
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206713"
     Site            order(64..65,112..113)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(66..71,84,170..171,173,200..202)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206713"
     Site            order(70..71,85,87,93..94,107..108,110,112..113,202)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(86..89,92..94)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206713"
     Site            order(86..87,91..94)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206713"
     Site            88
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206713"
     Site            110..113
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206713"
     Site            order(112..113,118..129)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206713"
     Site            170..173
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206713"
     Site            200..202
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206713"
     CDS             1..305
                     /gene="RASL12"
                     /coded_by="XM_041469374.1:41..958"
                     /db_xref="GeneID:121354615"
ORIGIN      
        1 mleqntlaka eqlltllsgl ispaswivsc rgprmssmfg kprasserpp qsplpecnva
       61 ilgcrgagks altvkfltkr fiseydpnle dtysseelvd qqpvllkvmd tadqdgpgnc
      121 erylcwasaf lvvysidnrk sfegcqryle vlalhargcq rrcpvlllgn kldmeqyrqv
      181 lsaegmslas rfgclfhevs acqdfarvqh vfheavrevr rqaewnlpvr plfiseerpc
      241 ppvatpvalp thhslatctf ntlspvsyke ipsvaqaklv tvkssraqsk rkaptltllk
      301 gfkif
//
LOCUS       XP_041325309             271 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-like protein family member 12 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325309
VERSION     XP_041325309.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469375.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="ras-like protein family member 12 isoform X2"
                     /calculated_mol_wt=30209
     Region          24..187
                     /region_name="RERG_RasL11_like"
                     /note="Ras-related and Estrogen-Regulated Growth inhibitor
                     (RERG) and Ras-like 11 (RasL11)-like families; cd04146"
                     /db_xref="CDD:206713"
     Site            29..36
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206713"
     Site            order(30..31,78..79)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(32..37,50,136..137,139,166..168)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206713"
     Site            order(36..37,51,53,59..60,73..74,76,78..79,168)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(52..55,58..60)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206713"
     Site            order(52..53,57..60)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206713"
     Site            54
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206713"
     Site            76..79
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206713"
     Site            order(78..79,84..95)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206713"
     Site            136..139
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206713"
     Site            166..168
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206713"
     CDS             1..271
                     /gene="RASL12"
                     /coded_by="XM_041469375.1:184..999"
                     /db_xref="GeneID:121354615"
ORIGIN      
        1 mssmfgkpra sserppqspl pecnvailgc rgagksaltv kfltkrfise ydpnledtys
       61 seelvdqqpv llkvmdtadq dgpgnceryl cwasaflvvy sidnrksfeg cqrylevlal
      121 hargcqrrcp vlllgnkldm eqyrqvlsae gmslasrfgc lfhevsacqd farvqhvfhe
      181 avrevrrqae wnlpvrplfi seerpcppva tpvalpthhs latctfntls pvsykeipsv
      241 aqaklvtvks sraqskrkap tltllkgfki f
//
LOCUS       XP_041325310             271 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-like protein family member 12 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325310
VERSION     XP_041325310.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469376.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..271
                     /product="ras-like protein family member 12 isoform X2"
                     /calculated_mol_wt=30209
     Region          24..187
                     /region_name="RERG_RasL11_like"
                     /note="Ras-related and Estrogen-Regulated Growth inhibitor
                     (RERG) and Ras-like 11 (RasL11)-like families; cd04146"
                     /db_xref="CDD:206713"
     Site            29..36
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206713"
     Site            order(30..31,78..79)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(32..37,50,136..137,139,166..168)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206713"
     Site            order(36..37,51,53,59..60,73..74,76,78..79,168)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206713"
     Site            order(52..55,58..60)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206713"
     Site            order(52..53,57..60)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206713"
     Site            54
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206713"
     Site            76..79
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206713"
     Site            order(78..79,84..95)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206713"
     Site            136..139
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206713"
     Site            166..168
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206713"
     CDS             1..271
                     /gene="RASL12"
                     /coded_by="XM_041469376.1:120..935"
                     /db_xref="GeneID:121354615"
ORIGIN      
        1 mssmfgkpra sserppqspl pecnvailgc rgagksaltv kfltkrfise ydpnledtys
       61 seelvdqqpv llkvmdtadq dgpgnceryl cwasaflvvy sidnrksfeg cqrylevlal
      121 hargcqrrcp vlllgnkldm eqyrqvlsae gmslasrfgc lfhevsacqd farvqhvfhe
      181 avrevrrqae wnlpvrplfi seerpcppva tpvalpthhs latctfntls pvsykeipsv
      241 aqaklvtvks sraqskrkap tltllkgfki f
//
LOCUS       XP_041325311             163 aa            linear   VRT 06-MAY-2021
DEFINITION  organic solute transporter subunit beta [Pyrgilauda ruficollis].
ACCESSION   XP_041325311
VERSION     XP_041325311.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469377.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..163
                     /product="organic solute transporter subunit beta"
                     /calculated_mol_wt=18503
     Region          54..153
                     /region_name="OSTbeta"
                     /note="Organic solute transporter subunit beta protein;
                     pfam15048"
                     /db_xref="CDD:405697"
     CDS             1..163
                     /gene="SLC51B"
                     /coded_by="XM_041469377.1:4198..4689"
                     /db_xref="GeneID:121354617"
ORIGIN      
        1 mkffwiipff llqaeaehky lpttlastrv dehtagnvtl plgleleqle ellwffrred
       61 pstwnysvla lslatmilgl vlltinivrn rkrkilvnre aaqttqeadl dakqalmpvq
      121 eyslaeplkq qpgpqdqrsg dvmvqwkdgt vtslyrgmse eai
//
LOCUS       XP_041325312            1514 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-protein kinase 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325312
VERSION     XP_041325312.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469378.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1514
                     /product="alpha-protein kinase 3 isoform X1"
                     /calculated_mol_wt=164686
     Region          77..169
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          94..98
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          107..111
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          135..139
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..154
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          162..165
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <491..1095
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1117..1177
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1127..1131
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1150..1154
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1164..1169
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1204..1434
                     /region_name="Alpha_kinase_ALPK3"
                     /note="Alpha-kinase domain of alpha-protein kinase 3;
                     cd16973"
                     /db_xref="CDD:341223"
     Site            order(1235..1240,1242,1262,1264,1321,1339..1342,1389,1391,
                     1399)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341223"
     CDS             1..1514
                     /gene="ALPK3"
                     /coded_by="XM_041469378.1:53..4597"
                     /db_xref="GeneID:121354618"
ORIGIN      
        1 msstrralag lygrgtshid gaeeaesaaw asrpdrrsyl lgirpqnsls ssrfspsslg
       61 rstfcaiisq lteetqplfe ttiksravse dsdakftciv tgypqpevtw ykddeemdry
      121 cglpkyeifr hgnhhtlqly kcreedagiy qasarnnkgi vscsgvlevg tmtefkihqk
      181 wfdkikrkae ekmqeieqgk krgkenveve rlqgmsperl qrkrrlardq nlqsgdcswe
      241 kedaakvhva dsqsrlhkdi aetkeqplsa vpgfpnklva plkaevttng datlengeen
      301 gnfltyiyet vedlatkpga kdsaakkkkk veapsapkqe vskreesgrd ranqssnprf
      361 appvplrrna rlraasdqev etspklkepg kavkqdvkpn ddmyfslkdm yfdkqvkpta
      421 gkevvgakde agsqaalqpv atsrqtedap lasevleagp vlsegqrgqq qeqklegnke
      481 vaarvgqspd dlnhpvsspt ketshqaskt eevrkevpvc qetrgavkrt nprfrpqepp
      541 kpparspdhv qsgkehpppr kqaerhshal edreiqqgll nqenksqgge esllknltpp
      601 epgantpleq ipcqtvkdgk skeagaelsg shpgvrtggs daaepclgav hreaggtplg
      661 hqntqnemaa pasvplakee plpasavrps vaqeallasn rspgmeattg evpsgaqllh
      721 parggteitt tdgsapreaf spitseqnak pvpmgpqgke gglltatapc qepaassgtw
      781 egvaevqpqv plvlpgsers qemsveekmq hknlvsslkn ylllllkmsd sskdatkgdt
      841 dsgdkeqpna gegmipeigi aglsprtsrk vlekvqnnql fqtaenlplt prtsrritgm
      901 ineefvtsqe mlacrpvppk rrtwgapeae gppplsvpsi vvgsmptagv aphlsdlppv
      961 sseegpadpl avlpcatpee lalgarrkiy lpkpkqvgve eeatpeslgh trsptvsprq
     1021 srknasllhs papapsspsd qcsptltrkm atlevpklye epagdtggdk evpgdakpea
     1081 qpaesqstnn pfkapqvvrk iraeqfsdas gnlklwcqff nilsdskltw ykdeipvaea
     1141 qrsagdegqa alavvqasqk dcgvyrcvis neygtdstdf llspevlsgf ilreeievge
     1201 eiemtpmvfa kgladagywg dklfgrvvse dmevgagflr kacraraiyg lepvfesght
     1261 cvikvhnfiv fgtknenslv eknyditiqe ckvqnssrey ckifaaeara vpdfgavpei
     1321 iplyliyrpa nnipyatmee dlgrpceqyc vterdgslva rgtseivlkc ctfqhwvyqw
     1381 tngnilvtdm egvgwkltnv riatnlkgyq glkescfpsl leqfpaahrc nhycsilglk
     1441 mlepakpkgs kspclgrksa qsspqlqkkv ltspqstrka svspkssrra aetgeastac
     1501 kprsgesnra gcpq
//
LOCUS       XP_041325313            1501 aa            linear   VRT 06-MAY-2021
DEFINITION  alpha-protein kinase 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325313
VERSION     XP_041325313.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469379.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1501
                     /product="alpha-protein kinase 3 isoform X2"
                     /calculated_mol_wt=163392
     Region          64..156
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          81..85
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          94..98
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          122..126
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          136..141
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          149..152
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <478..1082
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          <1104..1164
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          1114..1118
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          1137..1141
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          1151..1156
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          1191..1421
                     /region_name="Alpha_kinase_ALPK3"
                     /note="Alpha-kinase domain of alpha-protein kinase 3;
                     cd16973"
                     /db_xref="CDD:341223"
     Site            order(1222..1227,1229,1249,1251,1308,1326..1329,1376,1378,
                     1386)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:341223"
     CDS             1..1501
                     /gene="ALPK3"
                     /coded_by="XM_041469379.1:53..4558"
                     /db_xref="GeneID:121354618"
ORIGIN      
        1 msstrralag lygrgtshid gaeeaesaaw asrpdrrsyl lgirpqnrst fcaiisqlte
       61 etqplfetti ksravsedsd akftcivtgy pqpevtwykd deemdrycgl pkyeifrhgn
      121 hhtlqlykcr eedagiyqas arnnkgivsc sgvlevgtmt efkihqkwfd kikrkaeekm
      181 qeieqgkkrg kenveverlq gmsperlqrk rrlardqnlq sgdcsweked aakvhvadsq
      241 srlhkdiaet keqplsavpg fpnklvaplk aevttngdat lengeengnf ltyiyetved
      301 latkpgakds aakkkkkvea psapkqevsk reesgrdran qssnprfapp vplrrnarlr
      361 aasdqevets pklkepgkav kqdvkpnddm yfslkdmyfd kqvkptagke vvgakdeags
      421 qaalqpvats rqtedaplas evleagpvls egqrgqqqeq klegnkevaa rvgqspddln
      481 hpvssptket shqaskteev rkevpvcqet rgavkrtnpr frpqeppkpp arspdhvqsg
      541 kehppprkqa erhshaledr eiqqgllnqe nksqggeesl lknltppepg antpleqipc
      601 qtvkdgkske agaelsgshp gvrtggsdaa epclgavhre aggtplghqn tqnemaapas
      661 vplakeeplp asavrpsvaq eallasnrsp gmeattgevp sgaqllhpar ggteitttdg
      721 sapreafspi tseqnakpvp mgpqgkeggl ltatapcqep aassgtwegv aevqpqvplv
      781 lpgsersqem sveekmqhkn lvsslknyll lllkmsdssk datkgdtdsg dkeqpnageg
      841 mipeigiagl sprtsrkvle kvqnnqlfqt aenlpltprt srritgmine efvtsqemla
      901 crpvppkrrt wgapeaegpp plsvpsivvg smptagvaph lsdlppvsse egpadplavl
      961 pcatpeelal garrkiylpk pkqvgveeea tpeslghtrs ptvsprqsrk nasllhspap
     1021 apsspsdqcs ptltrkmatl evpklyeepa gdtggdkevp gdakpeaqpa esqstnnpfk
     1081 apqvvrkira eqfsdasgnl klwcqffnil sdskltwykd eipvaeaqrs agdegqaala
     1141 vvqasqkdcg vyrcvisney gtdstdflls pevlsgfilr eeievgeeie mtpmvfakgl
     1201 adagywgdkl fgrvvsedme vgagflrkac raraiyglep vfesghtcvi kvhnfivfgt
     1261 knenslvekn yditiqeckv qnssreycki faaearavpd fgavpeiipl yliyrpanni
     1321 pyatmeedlg rpceqycvte rdgslvargt seivlkcctf qhwvyqwtng nilvtdmegv
     1381 gwkltnvria tnlkgyqglk escfpslleq fpaahrcnhy csilglkmle pakpkgsksp
     1441 clgrksaqss pqlqkkvlts pqstrkasvs pkssrraaet geastackpr sgesnragcp
     1501 q
//
LOCUS       XP_041325314             159 aa            linear   VRT 06-MAY-2021
DEFINITION  spatacsin-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325314
VERSION     XP_041325314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469380.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522539.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..159
                     /product="spatacsin-like"
     CDS             1..159
                     /gene="LOC121354619"
                     /coded_by="XM_041469380.1:<1..480"
                     /db_xref="GeneID:121354619"
ORIGIN      
        1 tlaaaeraal gallgallde gsvleaarvc ryfqlrhrdv alvllcrala lgeaglqqpe
       61 vrallteaga apgaasledw tplgsgddav vaalkalaeg cvhgrgycrq vlclyelskv
      121 spgpwaspag ageglsrcpq gaaeggipal cvgkpdgrc
//
LOCUS       XP_041325317            1369 aa            linear   VRT 06-MAY-2021
DEFINITION  UPF0606 protein KIAA1549L homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041325317
VERSION     XP_041325317.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469383.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1369
                     /product="UPF0606 protein KIAA1549L homolog"
                     /calculated_mol_wt=148869
     Region          43..>295
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          445..1092
                     /region_name="DUF3827"
                     /note="Domain of unknown function (DUF3827); pfam12877"
                     /db_xref="CDD:463737"
     CDS             1..1369
                     /gene="KIAA1549L"
                     /coded_by="XM_041469383.1:1..4110"
                     /db_xref="GeneID:121354636"
ORIGIN      
        1 megiqqaqlq eshpghmesa mtkaagvrqq rvndapstgs fpnwrsilsp trpstetktp
       61 svadlslgqt lenadllqmi kttltgarar tldqmhlsps lyqgsgssap qepaevsaes
      121 plrpssqdad dtaaltglpq lvlsgvssga iptvetseak pltrksspas pvpassffsl
      181 gtentplpsv malstpiltl tknntatklt pdlssvgtqa dfpfatrntt aspldtpall
      241 itpksstvta stlaptahvp rqiettvtdt qkfpssdisk rptpspltmt aaltsitasa
      301 kttrlpppav elspaapdtt aaaafanmta apsldcrlsa nmmvktvlfl ntrrmmisna
      361 fresvrkgln qvlrqafnqn vsaqveileq ssnltvgyyv trgrlvftpa avaekllayg
      421 lgnatadmkq hvphlqalva lalpwqplpa yhfqlktelq fvgqtdniqs ckfvqtmeqr
      481 lqrafqdaer kvlntsnnlt vqilntsnvs qavtlfyvvk nqsttlngti ssnllnqlsa
      541 elvgfyltyp pltiaesley pnldvsestr dywvitviqg vdiallglnn qsfarlmeqr
      601 laplfmmshq qgrrfrratt vgsytvqmvk iqripgpkep aeltyytlyn gkpllgtaaa
      661 kilstvdsqr maltlgyviq vqadpvvktp pnnlwiiaav lapiavvtvi iiiitavlcr
      721 knkndfkpdt mmnlpqrakp vqgfdyakqh lgqqgaedev lpvtqetvil plpvrdapas
      781 qerettqdgs tiktaksnet rksrspsqng silsngsgkp sssrsslhkv mapqkaakde
      841 grkrndftsp kkivavsdee eggilfdnva ksavdpfdts sgsvqliaik pvalpavhaa
      901 sersqesaii ngevnkalkq ksdiehyrnk lrlkakrkgy ydfpqvdnsk altdrkrmye
      961 knqkeldhil dpdadvsspf aepknrqplk nsvyrsrqsl nspspgetem dllvtrerpr
     1021 rgirnsgydt epeiieetnv drvneprnyg rarqakghse tstlssqpsi devrqqmhml
     1081 leeafslasa ghggqprhda ygsaphlpys evvtsapgtm trpragvqwv ptyrpemyqy
     1141 slprpayrfs qlpemvmgsp pppvpprtgp vavaslrrst sdigskvrip essgadqaqh
     1201 hdqtpfapgs rapmsvgple qsafhsgntv pavfaipanr pgftgyfipt pptayrnqaw
     1261 mpyagenelp gqwadsvplp gyieayprpr yqhnspsrlp rqysqqgslh psleqaplas
     1321 aaasqqslad ndpsdapltn istaalvkai reevaklakk qtdmfefqv
//
LOCUS       XP_041325318             140 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C11orf91 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041325318
VERSION     XP_041325318.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469384.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522540.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..140
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..140
                     /product="uncharacterized protein C11orf91 homolog"
                     /calculated_mol_wt=14560
     Region          8..140
                     /region_name="DUF5529"
                     /note="Family of unknown function (DUF5529); pfam17669"
                     /db_xref="CDD:435961"
     CDS             1..140
                     /gene="CUNH11orf91"
                     /coded_by="XM_041469384.1:1..423"
                     /db_xref="GeneID:121354637"
ORIGIN      
        1 mtvqrpswpp lyfphfhgte pvprpaggaw aplaalcwpw qplpaaxxxx xxaalpaavv
       61 pepprlccpp gapragdaar rppelaqlql qeemcelgir lkelelaali gdgfdgrqyk
      121 ilkaleekki qsmkamqnlk
//
LOCUS       XP_041325319            1185 aa            linear   VRT 06-MAY-2021
DEFINITION  homeodomain-interacting protein kinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325319
VERSION     XP_041325319.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469385.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1185
                     /product="homeodomain-interacting protein kinase 3"
                     /calculated_mol_wt=129255
     Region          195..524
                     /region_name="STKc_HIPK3"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Homeodomain-Interacting Protein Kinase 3; cd14229"
                     /db_xref="CDD:271131"
     Site            order(202..206,210,223,225,239,258,274..277,280,282..283,
                     321,323,325..326,328,343,346,356,358..361,363,400)
                     /site_type="active"
                     /db_xref="CDD:271131"
     Site            order(202..206,210,223,225,258,274..277,280,321,323,
                     325..326,328,343)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271131"
     Site            order(239,282,321,323,346,356,358..361,363,400)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271131"
     Site            342..363
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271131"
     CDS             1..1185
                     /gene="HIPK3"
                     /coded_by="XM_041469385.1:334..3891"
                     /db_xref="GeneID:121354638"
ORIGIN      
        1 masqvlvypp yvyqtqssaf csvkklklep sscvyherty pqiyvngknf gisphrvstf
       61 fqtknpfdrp rgqsfwlqsn avalkntaga tkalaawpqq pqleapgagt qgsrsdileg
      121 aqrcglkrks eelenqsgtm qivdelsilp amlqsgvanp vtvvataaas kqggtggdgd
      181 yqlvqhevlc svkntyevld flgrgtfgqv vkcwkrgtne ivaikilknh psyvrqgqie
      241 vsilarlste nadefnfvra yecfqhrnht clvfemleqn lydflkqnkf splqlkvirp
      301 ilqqvatalk klkslgliha dlkpenimlv dpvrqpyrvk vidfgsashv skticstylq
      361 sryyrapeii lglpfceaid mwslgcviae lflgwplypg aleydqiryi sqtqglpgeq
      421 llsmgtktar ffcretdapy sswrlktlee heaetgmksk earkyifnsl ddivhvnmvm
      481 dlegsdllae kadrrefvsl lkkmllidad lritpaetln hsfvtmkhll dfphsnqvks
      541 cfhimdickc rsnlydlsnc nktslmrsva sgsaanltas ftkigpvrsq altasahsvl
      601 hqgiplqagt aqfgcsdvfq qaliicppai qgiptnhskp tsfslrvdna vplvtqahai
      661 qplqiragil sqawsnqtqq ilvpawqqva pvaapatsla sdpvagpqrl gdwgkmitqg
      721 thyssmipqp llthqitlsa pqpisvgiah vvwpqpaatk rnklcqnrsn mlqntniqns
      781 afispkilnl kavkriscie aqdnlnsegq eggccaslgl apaacvpssp rqalflagpp
      841 spavsvitis sdtdeddvar ahalreckgs leceacqntl nidrvcslss pdstlstsss
      901 eqsspspckr snsmsddeqe sgcdtvdgsp ssdssghdsp fvengfvdnn nknkearasv
      961 npetkstvct vvvppmrlen rlhleeqmvn tdapcqplrk grsvlgrtnq ssvvgnrqqk
     1021 ltsafhqhhg nfsqvqhfas gpqewngnfa vrrqqqqqqp flpatvasha fslpqgspsh
     1081 lpgsshlggq pailpyaspa pvahllaspc asrallqhpa yglshasgiv hqvpvginpr
     1141 llpspgvhqt qykalfpphs yiaaspaaya gfplsptkls qfpfm
//
LOCUS       XP_041325320            1185 aa            linear   VRT 06-MAY-2021
DEFINITION  homeodomain-interacting protein kinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325320
VERSION     XP_041325320.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469386.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522540.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1185
                     /product="homeodomain-interacting protein kinase 3"
                     /calculated_mol_wt=129255
     Region          195..524
                     /region_name="STKc_HIPK3"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Homeodomain-Interacting Protein Kinase 3; cd14229"
                     /db_xref="CDD:271131"
     Site            order(202..206,210,223,225,239,258,274..277,280,282..283,
                     321,323,325..326,328,343,346,356,358..361,363,400)
                     /site_type="active"
                     /db_xref="CDD:271131"
     Site            order(202..206,210,223,225,258,274..277,280,321,323,
                     325..326,328,343)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271131"
     Site            order(239,282,321,323,346,356,358..361,363,400)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271131"
     Site            342..363
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271131"
     CDS             1..1185
                     /gene="HIPK3"
                     /coded_by="XM_041469386.1:203..3760"
                     /db_xref="GeneID:121354638"
ORIGIN      
        1 masqvlvypp yvyqtqssaf csvkklklep sscvyherty pqiyvngknf gisphrvstf
       61 fqtknpfdrp rgqsfwlqsn avalkntaga tkalaawpqq pqleapgagt qgsrsdileg
      121 aqrcglkrks eelenqsgtm qivdelsilp amlqsgvanp vtvvataaas kqggtggdgd
      181 yqlvqhevlc svkntyevld flgrgtfgqv vkcwkrgtne ivaikilknh psyvrqgqie
      241 vsilarlste nadefnfvra yecfqhrnht clvfemleqn lydflkqnkf splqlkvirp
      301 ilqqvatalk klkslgliha dlkpenimlv dpvrqpyrvk vidfgsashv skticstylq
      361 sryyrapeii lglpfceaid mwslgcviae lflgwplypg aleydqiryi sqtqglpgeq
      421 llsmgtktar ffcretdapy sswrlktlee heaetgmksk earkyifnsl ddivhvnmvm
      481 dlegsdllae kadrrefvsl lkkmllidad lritpaetln hsfvtmkhll dfphsnqvks
      541 cfhimdickc rsnlydlsnc nktslmrsva sgsaanltas ftkigpvrsq altasahsvl
      601 hqgiplqagt aqfgcsdvfq qaliicppai qgiptnhskp tsfslrvdna vplvtqahai
      661 qplqiragil sqawsnqtqq ilvpawqqva pvaapatsla sdpvagpqrl gdwgkmitqg
      721 thyssmipqp llthqitlsa pqpisvgiah vvwpqpaatk rnklcqnrsn mlqntniqns
      781 afispkilnl kavkriscie aqdnlnsegq eggccaslgl apaacvpssp rqalflagpp
      841 spavsvitis sdtdeddvar ahalreckgs leceacqntl nidrvcslss pdstlstsss
      901 eqsspspckr snsmsddeqe sgcdtvdgsp ssdssghdsp fvengfvdnn nknkearasv
      961 npetkstvct vvvppmrlen rlhleeqmvn tdapcqplrk grsvlgrtnq ssvvgnrqqk
     1021 ltsafhqhhg nfsqvqhfas gpqewngnfa vrrqqqqqqp flpatvasha fslpqgspsh
     1081 lpgsshlggq pailpyaspa pvahllaspc asrallqhpa yglshasgiv hqvpvginpr
     1141 llpspgvhqt qykalfpphs yiaaspaaya gfplsptkls qfpfm
//
LOCUS       XP_041325321             212 aa            linear   VRT 06-MAY-2021
DEFINITION  scaffold attachment factor B1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325321
VERSION     XP_041325321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469387.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522563.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..212
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..212
                     /product="scaffold attachment factor B1-like"
                     /calculated_mol_wt=22540
     CDS             1..212
                     /gene="LOC121354640"
                     /coded_by="XM_041469387.1:133..771"
                     /db_xref="GeneID:121354640"
ORIGIN      
        1 mspvyflkve fedvgnslda ssadltvike leelplepen ekildilget cksellneep
       61 peaerpraqe asnagpgkrl aeeedalaaa qleedalald sksaqalark eakrlvvakg
      121 etseqspeee apdsegvvve tlsdqsskrs qgleassget aekgagaear dskedgkrae
      181 dkanseessp atkessaseg gdqkkrfvfs pf
//
LOCUS       XP_041325322             226 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide-binding protein-like 1, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325322
VERSION     XP_041325322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469388.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522629.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 28% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..226
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>226
                     /product="guanine nucleotide-binding protein-like 1"
     Region          <95..151
                     /region_name="YlqF_related_GTPase"
                     /note="Circularly permuted YlqF-related GTPases; cl49605"
                     /db_xref="CDD:483945"
     Site            100..107
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206746"
     Site            125..132
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206746"
     Site            128
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206746"
     Site            144..147
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206746"
     Region          <146..>224
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Site            146..148
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206746"
     CDS             1..226
                     /gene="LOC121354641"
                     /coded_by="XM_041469388.1:<1..>680"
                     /codon_start=3
                     /db_xref="GeneID:121354641"
ORIGIN      
        1 lqkrqkkrgg rwgravgprl lleacqeivg gavdlsswra rleraeqrpe deedeeeeee
       61 eepprgdede eeegagpggv apprqweryr hgvltlgcvg lpnagkssvl nallgrgava
      121 vsrcpgrtry fqthfltgsv rlcdcpglvf psrapptcrd llgpartcrg lpgpartcrd
      181 qpgpagacqd lpgsartcrd lpgpagacwd lpgpartcrd lpgrsg
//
LOCUS       XP_041325323             606 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related BTB domain-containing protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325323
VERSION     XP_041325323.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469389.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522651.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..606
                     /product="rho-related BTB domain-containing protein 3"
                     /calculated_mol_wt=68361
     Region          <88..171
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          233..391
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          405..514
                     /region_name="BTB2_POZ_RHOBTB3"
                     /note="second BTB (Broad-Complex, Tramtrack and Bric a
                     brac)/POZ (poxvirus and zinc finger) domain found in
                     Rho-related BTB domain-containing protein 3 (RhoBTB3);
                     cd18360"
                     /db_xref="CDD:349669"
     Region          524..606
                     /region_name="BACK_RHOBTB3"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Rho-related BTB domain-containing protein 3 (RhoBTB3);
                     cd18532"
                     /db_xref="CDD:350607"
     CDS             1..606
                     /gene="RHOBTB3"
                     /coded_by="XM_041469389.1:85..1905"
                     /db_xref="GeneID:121354642"
ORIGIN      
        1 msvnivafgn erdgfsednq qpsliwsylg rsalisqids slsfyvgnpv fteyqacvfg
       61 nvrlvvhdcp vwgifdsdwy tscrliggad iivikysvnd ktsfqelkds yvpmvkkaln
      121 hcsvpviisa igarkngvpc tcplctsdrr scvttsegvq lakelgatyl elhtlndfyi
      181 qkyfggvley fmiqslnqks sqktkkrkkt qkchrvqppq leqpekmpil kgeashynad
      241 lhnllcccqc advafypedl staveahkii lcsvshlfml lfgvkrpsda hdastvqlaq
      301 slfvveagdp fpssprgvpp cvppvrvvvk dsvfcsclpd ilhfiysgaf qwerleedir
      361 kklkdpdkte hvlekvkcil ktpgklntvq dckshqikql yntslrlffn tpvladvifk
      421 iqgatvpahr avlvarcevm aamfngnyle ansilvpvyg vskdtflsfl eylytdsccp
      481 asilqamsll icaemyqvmr lqhicelyii tqlqsmpsre lastslsivs llkkakfhns
      541 dclstwllhf iatnylifsq kpefqelsve ernfvemhrw psnlylkqla dyrnyihsqk
      601 chctvm
//
LOCUS       XP_041325325             195 aa            linear   VRT 06-MAY-2021
DEFINITION  Rieske domain-containing protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325325
VERSION     XP_041325325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469391.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..195
                     /product="Rieske domain-containing protein isoform X1"
                     /calculated_mol_wt=21749
     Region          46..163
                     /region_name="NirD"
                     /note="Ferredoxin subunit of nitrite reductase or a
                     ring-hydroxylating dioxygenase [Inorganic ion transport
                     and metabolism, Secondary metabolites biosynthesis,
                     transport and catabolism]; COG2146"
                     /db_xref="CDD:441749"
     CDS             1..195
                     /gene="RFESD"
                     /coded_by="XM_041469391.1:466..1053"
                     /db_xref="GeneID:121354643"
ORIGIN      
        1 mfdliiltvh fficflisia iwygpkdvds hssstggaem ephglifigk eedikksqri
       61 takidgreiv vfyhegkfha ldsrcyhegg plchgeiedi dgqacivcpw hkfkitletg
      121 eglyeginpq epsptpkwqs kgvkqrihkv tihngnvyvn ppdlsvsfds dyfaekykig
      181 gesaigkpsr leame
//
LOCUS       XP_041325326             195 aa            linear   VRT 06-MAY-2021
DEFINITION  Rieske domain-containing protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325326
VERSION     XP_041325326.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469392.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..195
                     /product="Rieske domain-containing protein isoform X1"
                     /calculated_mol_wt=21749
     Region          46..163
                     /region_name="NirD"
                     /note="Ferredoxin subunit of nitrite reductase or a
                     ring-hydroxylating dioxygenase [Inorganic ion transport
                     and metabolism, Secondary metabolites biosynthesis,
                     transport and catabolism]; COG2146"
                     /db_xref="CDD:441749"
     CDS             1..195
                     /gene="RFESD"
                     /coded_by="XM_041469392.1:358..945"
                     /db_xref="GeneID:121354643"
ORIGIN      
        1 mfdliiltvh fficflisia iwygpkdvds hssstggaem ephglifigk eedikksqri
       61 takidgreiv vfyhegkfha ldsrcyhegg plchgeiedi dgqacivcpw hkfkitletg
      121 eglyeginpq epsptpkwqs kgvkqrihkv tihngnvyvn ppdlsvsfds dyfaekykig
      181 gesaigkpsr leame
//
LOCUS       XP_041325327             156 aa            linear   VRT 06-MAY-2021
DEFINITION  Rieske domain-containing protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325327
VERSION     XP_041325327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522651.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="Rieske domain-containing protein isoform X2"
                     /calculated_mol_wt=17435
     Region          7..124
                     /region_name="NirD"
                     /note="Ferredoxin subunit of nitrite reductase or a
                     ring-hydroxylating dioxygenase [Inorganic ion transport
                     and metabolism, Secondary metabolites biosynthesis,
                     transport and catabolism]; COG2146"
                     /db_xref="CDD:441749"
     CDS             1..156
                     /gene="RFESD"
                     /coded_by="XM_041469393.1:575..1045"
                     /db_xref="GeneID:121354643"
ORIGIN      
        1 mephglifig keedikksqr itakidgrei vvfyhegkfh aldsrcyheg gplchgeied
       61 idgqacivcp whkfkitlet geglyeginp qepsptpkwq skgvkqrihk vtihngnvyv
      121 nppdlsvsfd sdyfaekyki ggesaigkps rleame
//
LOCUS       XP_041325328             364 aa            linear   VRT 06-MAY-2021
DEFINITION  fructose-bisphosphate aldolase B [Pyrgilauda ruficollis].
ACCESSION   XP_041325328
VERSION     XP_041325328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522651.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..364
                     /product="fructose-bisphosphate aldolase B"
                     /calculated_mol_wt=39351
     Region          16..364
                     /region_name="Glycolytic"
                     /note="Fructose-bisphosphate aldolase class-I; pfam00274"
                     /db_xref="CDD:459742"
     CDS             1..364
                     /gene="LOC121354644"
                     /coded_by="XM_041469394.1:128..1222"
                     /db_xref="GeneID:121354644"
ORIGIN      
        1 mthqfpalsp eqkkaladia qrivasgkgi laadesvgtm gnrlqrinve nteenrrafr
       61 evlfssdtsi nqsiggvilf hetlyqkdsn gkpfpaiike kgivvgikld kgtaplagtn
      121 gettiqgldg laercaqykk dgadfgkwra vlkitsttps qlaiqenant laryasicqq
      181 hglvpivepe ilpdgdhdlq rcqyvtekvl aavykalndh hvylegtllk pnmvtaghsc
      241 skkytpqdva iatvttllrt vpaavpgicf lsggqseeea slnlnamnqc plpkpwkltf
      301 sygralqasa laawlgksen kkaaqeafrk raqinslacr gqyvqsgknd aaamqslfta
      361 syty
//
LOCUS       XP_041325329             325 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase-related protein type 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325329
VERSION     XP_041325329.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469395.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522651.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="phospholipid phosphatase-related protein type 1"
                     /calculated_mol_wt=35720
     Region          123..272
                     /region_name="PAP2_wunen"
                     /note="PAP2, wunen subfamily. Most likely a family of
                     membrane associated phosphatidic acid phosphatases. Wunen
                     is a drosophila protein expressed in the central nervous
                     system, which provides repellent activity towards
                     primordial germ cells (PGCs), controls the...; cd03384"
                     /db_xref="CDD:239479"
     Site            order(146,153,198..200,246,252,256)
                     /site_type="active"
                     /db_xref="CDD:239479"
     CDS             1..325
                     /gene="PLPPR1"
                     /coded_by="XM_041469395.1:244..1221"
                     /db_xref="GeneID:121354645"
ORIGIN      
        1 malgnntqrs ysiipcfifv elvimagtvl layyfeytdt fqvhiqgffc qdgslmkpyp
       61 gtedesfisp lvlycvlast ptaiifigei smyfikstre tliiqektil tgeccylnpl
      121 lrriirftgv fafglfatdi fvnagqvvtg nlapyfltvc kpnytgnncr ahhqfinngn
      181 ictgdvevie karrsfpskh aalsiysaly atmyitstik tkssrlakpv lclgtlcaaf
      241 ltglnrvsey rnhcsdviag filgsavalf lgicvvhnfk gshaapykpk pedprgvplm
      301 afprvesple tlsaqnhsas mtevt
//
LOCUS       XP_041325330             108 aa            linear   VRT 06-MAY-2021
DEFINITION  MAP/microtubule affinity-regulating kinase 4-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325330
VERSION     XP_041325330.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469396.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522685.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>108
                     /product="MAP/microtubule affinity-regulating kinase
                     4-like"
     Region          <1..98
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..108
                     /gene="LOC121354646"
                     /coded_by="XM_041469396.1:<1..>325"
                     /db_xref="GeneID:121354646"
ORIGIN      
        1 ivsavhychq knivhrdlka enllldadan ikiadfgfsn efsrgskldt fcgsppyaap
       61 elfqgkkydg pevdiwslgv ilytlvsgsl pfdghnlkvt aqspgapp
//
LOCUS       XP_041325331             345 aa            linear   VRT 06-MAY-2021
DEFINITION  mas-related G-protein coupled receptor member D-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325331
VERSION     XP_041325331.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469397.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522696.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..345
                     /product="mas-related G-protein coupled receptor member
                     D-like"
                     /calculated_mol_wt=38456
     Region          44..325
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          46..70
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          74..97
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          118..138
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          161..178
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          199..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          235..253
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          263..286
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..345
                     /gene="LOC121354647"
                     /coded_by="XM_041469397.1:967..2004"
                     /db_xref="GeneID:121354647"
ORIGIN      
        1 mlttsrghip lpaqcpsmev ttvstfftsp ndgpgqcein vssmamhfvt lliglcglag
       61 ngtflwllli daitdfvafn qasidflfli fmvpstllfl veevscsali spmylsllsq
      121 lslftytmgl fqlmfisier crsilclffc vgqqseqllw vvmsalfwal ffvvtavnpt
      181 vtslcqsheq ekcqvaltsm yalnlflfav pmvisctilf ihfkpgsqep pknldivifl
      241 valfslplsl wlflqqlgyt avpsqvvfll tcitssikpf iyflvgswkr aysmrscwrl
      301 csmqscrrhs smqslrkaih rvfeeprent acgddpavdt easac
//
LOCUS       XP_041325332             157 aa            linear   VRT 06-MAY-2021
DEFINITION  CLK4-associating serine/arginine rich protein-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325332
VERSION     XP_041325332.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469398.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522718.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>157
                     /product="CLK4-associating serine/arginine rich
                     protein-like"
     CDS             1..157
                     /gene="LOC121354648"
                     /coded_by="XM_041469398.1:<1..>471"
                     /codon_start=2
                     /db_xref="GeneID:121354648"
ORIGIN      
        1 irdlpqnptl ipffipgkrm lrkdkeeaea iknakaleee kamysgrrsr rqrrefrekr
       61 lkgrkispps yarrdsptyd pykrspsess sesrsrsrtp slgheekitf itsfggsdee
      121 ppgapgapgr srrgsrerqr sasapgasap ahrassr
//
LOCUS       XP_041325333             109 aa            linear   VRT 06-MAY-2021
DEFINITION  voltage-dependent P/Q-type calcium channel subunit alpha-1A-like,
            partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325333
VERSION     XP_041325333.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469399.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522751.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..109
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>109
                     /product="voltage-dependent P/Q-type calcium channel
                     subunit alpha-1A-like"
     Region          39..>109
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..109
                     /gene="LOC121354649"
                     /coded_by="XM_041469399.1:8..>334"
                     /db_xref="GeneID:121354649"
ORIGIN      
        1 mgspfarasl ksaklesatf lgrrerrvrf hirrmvktqa fywtvlslva lntlcvaivh
       61 ydqpdwlsdf lyyaefiflg lfmsemfikm yglgtrpyfh ssfncfdca
//
LOCUS       XP_041325334             587 aa            linear   VRT 06-MAY-2021
DEFINITION  ran-binding protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325334
VERSION     XP_041325334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="ran-binding protein 3 isoform X1"
                     /calculated_mol_wt=62590
     Region          <32..165
                     /region_name="PHA03325"
                     /note="nuclear-egress-membrane-like protein; Provisional"
                     /db_xref="CDD:223044"
     Region          320..>477
                     /region_name="YRB1"
                     /note="Ran GTPase-activating protein (Ran-binding protein)
                     [Intracellular trafficking and secretion]; COG5171"
                     /db_xref="CDD:227499"
     Region          414..529
                     /region_name="RanBD_RanBP3"
                     /note="Ran-binding protein 3 Ran-binding domain; cd13180"
                     /db_xref="CDD:270001"
     Site            order(428,430..432,437..442,463,465,467..468,472..474,477,
                     479,483,487,495,497,508,512)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270001"
     CDS             1..587
                     /gene="RANBP3"
                     /coded_by="XM_041469400.1:105..1868"
                     /db_xref="GeneID:121354650"
ORIGIN      
        1 madlaneekp aiappvfvfq kdkaqkspae qkalsdsged pqgeveppyh glghtepage
       61 cdsehpapav asvsatlsps seaqlapiqq elagrsadgs spedgdesdr edgsycppvk
      121 rertssltqf ppsqsvtknn vfmpssfcep stgnsdsepe ekssgfrlkp pilihgqaps
      181 aglpsqkpke qqrsvlrpav lqapqpkafs qmvlssgtng vnippdsaat sespsdatlk
      241 ssdsedkaae cqkkesnnts dddssekael naqqafvfgq nlrdrvklgd esnetadvqn
      301 aglltsdips atnyflqyis ssvenstnsa dassnkfvfg qnmservlsp pksnegstes
      361 nkenaatesg sesssqeatp ekannisesl aesaaaytka tarkcllakv evitgeeaes
      421 nvlqiqcklf vfdkssqswv ergrgllrln dmastddgtl qsrlvmrtqg slrlilntkl
      481 waqmqidkas eksiritamd tedqgvkvfl isasskdtgq lyaalhhril alrsrveqeq
      541 evknvepepe vtqsneedsd dddviapsgs vgsgpndead gqnvgst
//
LOCUS       XP_041325335             556 aa            linear   VRT 06-MAY-2021
DEFINITION  ran-binding protein 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325335
VERSION     XP_041325335.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469401.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="ran-binding protein 3 isoform X2"
                     /calculated_mol_wt=59162
     Region          <32..206
                     /region_name="PHA03325"
                     /note="nuclear-egress-membrane-like protein; Provisional"
                     /db_xref="CDD:223044"
     Region          289..>446
                     /region_name="YRB1"
                     /note="Ran GTPase-activating protein (Ran-binding protein)
                     [Intracellular trafficking and secretion]; COG5171"
                     /db_xref="CDD:227499"
     Region          383..498
                     /region_name="RanBD_RanBP3"
                     /note="Ran-binding protein 3 Ran-binding domain; cd13180"
                     /db_xref="CDD:270001"
     Site            order(397,399..401,406..411,432,434,436..437,441..443,446,
                     448,452,456,464,466,477,481)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270001"
     CDS             1..556
                     /gene="RANBP3"
                     /coded_by="XM_041469401.1:105..1775"
                     /db_xref="GeneID:121354650"
ORIGIN      
        1 madlaneekp aiappvfvfq kdkaqkspae qkalsdsged pqgeveppyh glghtepage
       61 cdsehpapav asvsatlsps seaqlapiqq elagrsadgs spedgdesdr edgsycppvk
      121 rertssltqf ppsqsvtknn vfmpssfcep stgnsdsepe ekssgfrlkp pilihgqaps
      181 avlssgtngv nippdsaats espsdatlks sdsedkaaec qkkesnntsd ddssekaeln
      241 aqqafvfgqn lrdrvklgde snetadvqna glltsdipsa tnyflqyiss svenstnsad
      301 assnkfvfgq nmservlspp ksnegstesn kenaatesgs esssqeatpe kannisesla
      361 esaaaytkat arkcllakve vitgeeaesn vlqiqcklfv fdkssqswve rgrgllrlnd
      421 mastddgtlq srlvmrtqgs lrlilntklw aqmqidkase ksiritamdt edqgvkvfli
      481 sasskdtgql yaalhhrila lrsrveqeqe vknvepepev tqsneedsdd ddviapsgsv
      541 gsgpndeadg qnvgst
//
LOCUS       XP_041325336             519 aa            linear   VRT 06-MAY-2021
DEFINITION  ran-binding protein 3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325336
VERSION     XP_041325336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..519
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..519
                     /product="ran-binding protein 3 isoform X3"
                     /calculated_mol_wt=55747
     Region          252..>409
                     /region_name="YRB1"
                     /note="Ran GTPase-activating protein (Ran-binding protein)
                     [Intracellular trafficking and secretion]; COG5171"
                     /db_xref="CDD:227499"
     Region          346..461
                     /region_name="RanBD_RanBP3"
                     /note="Ran-binding protein 3 Ran-binding domain; cd13180"
                     /db_xref="CDD:270001"
     Site            order(360,362..364,369..374,395,397,399..400,404..406,409,
                     411,415,419,427,429,440,444)
                     /site_type="other"
                     /note="putative RAN binding site [polypeptide binding]"
                     /db_xref="CDD:270001"
     CDS             1..519
                     /gene="RANBP3"
                     /coded_by="XM_041469402.1:105..1664"
                     /db_xref="GeneID:121354650"
ORIGIN      
        1 madlaneekp aiappvfvfq kdkaqkrsad gsspedgdes dredgsycpp vkrertsslt
       61 qfppsqsvtk nnvfmpssfc epstgnsdse peekssgfrl kppilihgqa psaglpsqkp
      121 keqqrsvlrp avlqapqpka fsqmvlssgt ngvnippdsa atsespsdat lkssdsedka
      181 aecqkkesnn tsdddsseka elnaqqafvf gqnlrdrvkl gdesnetadv qnaglltsdi
      241 psatnyflqy isssvenstn sadassnkfv fgqnmservl sppksnegst esnkenaate
      301 sgsesssqea tpekannise slaesaaayt katarkclla kvevitgeea esnvlqiqck
      361 lfvfdkssqs wvergrgllr lndmastddg tlqsrlvmrt qgslrlilnt klwaqmqidk
      421 aseksirita mdtedqgvkv flisasskdt gqlyaalhhr ilalrsrveq eqevknvepe
      481 pevtqsneed sddddviaps gsvgsgpnde adgqnvgst
//
LOCUS       XP_041325337             224 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ceramide synthase 4-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325337
VERSION     XP_041325337.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469403.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 5% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..224
                     /product="LOW QUALITY PROTEIN: ceramide synthase 4-like"
     Region          1..179
                     /region_name="TLC"
                     /note="TRAM, LAG1 and CLN8 homology domains; smart00724"
                     /db_xref="CDD:214789"
     CDS             1..224
                     /gene="LOC121354651"
                     /coded_by="XM_041469403.1:<1..676"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /codon_start=2
                     /db_xref="GeneID:121354651"
ORIGIN      
        1 wrftlyftsf fsglallhde lwfwdhtmcw lkfpqqplpp ifgwfyllel sycslmatlp
       61 fdmkrrdfke qivhhiatit lifvsycasm irfgmivmlv hvasdyilel akilhylkwx
      121 rvceavfsvs vvvfiiswlv ifplivyyyf itkvslflis clinaflvil qllhifwsyv
      181 iixssmsssv mryekslspl chhwswenmr frvtptclqe grre
//
LOCUS       XP_041325338             612 aa            linear   VRT 06-MAY-2021
DEFINITION  lamin-B2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325338
VERSION     XP_041325338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469404.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..612
                     /product="lamin-B2"
                     /calculated_mol_wt=69074
     Region          36..392
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     Region          463..571
                     /region_name="LTD"
                     /note="Lamin Tail Domain; pfam00932"
                     /db_xref="CDD:460003"
     CDS             1..612
                     /gene="LMNB2"
                     /coded_by="XM_041469404.1:564..2402"
                     /db_xref="GeneID:121354652"
ORIGIN      
        1 msrcpparqp samsgtpsrg tpggtplspt risrlqekee lrqlndrlav yidrvralel
       61 endrlllkis ekeevttrev sgikslyese ladarrvlde takerarlqi eigklraele
      121 efnksykkkd adlsvaqgri kdlevlfhrs eaelntvlne krsleaevad lraqlakaed
      181 ghavakkqle ketlmrvdle nrcqslqedl dfrknvfeee iretrkrheh rlievdtsrq
      241 qeyeskmtqa ledlrnqhde qvklykmele qtyqaklena klssdqndka agaareelke
      301 armriealsy qlsglqkqas aaedrirele emmagerekf rkmldakere mtdmrdqmql
      361 qlteyqelld vklaldmeis ayrkllegee erlklspsps srvtvsrats sssssstslv
      421 rssrgkrkri eaeelsgsgt sgigtgsisg ssssssfqms qqasatgsis ieeidlegky
      481 vqlknnsekd qslgnwrlkr qigdgdeiay kftpkyvlra gqtvtiwgad agvshsppsv
      541 lvwknqgswg tggnirtylv nsegeevavr svtksvvvre neeeedeaey geedlfnqqg
      601 dprttsrgcs vm
//
LOCUS       XP_041325339             937 aa            linear   VRT 06-MAY-2021
DEFINITION  lon protease homolog, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041325339
VERSION     XP_041325339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469405.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..937
                     /product="lon protease homolog, mitochondrial"
                     /calculated_mol_wt=104145
     Region          111..929
                     /region_name="lon"
                     /note="endopeptidase La; TIGR00763"
                     /db_xref="CDD:273258"
     CDS             1..937
                     /gene="LONP1"
                     /coded_by="XM_041469405.1:29..2842"
                     /db_xref="GeneID:121354653"
ORIGIN      
        1 maaarwwrlc grwrpavtgp vlgptrrrlw apaaavstpl gsapppraaf stgprwhqrs
       61 pgglpggdav egggedsggg gggggadsgg agpvitaltp llvpehfpnv pliavtrnpv
      121 fprfikiiev knkklvellr rkvrlaqpya gvflkkddnn esdvvedlne iyqmgtfvqi
      181 hemqdlgdkl rmivmghrri rinkqlevep eepenkqkir rkqkrskkea eeetgvkdqa
      241 velvldpiaa sskevlmvev envvhedfqi teevkaltae ivktirdiia lnplyresvl
      301 qmmqagqrvv dnpiylsdmg aaltgaeshe lqdileetsi pkrlykalsl lkkeyelskl
      361 qqrlgrevee kikqthrkyl lqeqlkiikk elglekedkd aieekfrerl kelvvpkhvm
      421 dvideelnkl glldnhssef nvtrnyldwl tsipwgkcse enlelaraqa vleedhygmd
      481 dvkkrilefi avsqlrgstq gkilcfygpp gvgktsiars iaralnreyf rfsvggmtdv
      541 aeikghrrty vgampgkiiq clkktktenp lilidevdki grgyqgdpss allelldpeq
      601 nsnfldhyld vpvdlskvlf ictanvteti peplrdrmev invsgyvaee klaiaerylv
      661 pqarvlcgld enkaqitsdv ltvlikqycr esgvrnlqkq vekvlrksay kivsgeaemv
      721 qvtpenlqdf vgkpiftvdr myettppgvv mglawtamgg stlfietslr rpkdkenkdg
      781 slevtgqlgd vmkesakiay tfaraflmqk dpnndfliss hihlhvpega tpkdgpsagc
      841 tivtallsla mncpvrqnva mtgevsltgk ilpvggikek tiaakragvt ciilpsenkk
      901 dyydlagfit eglevhfveh ytevfdiafs qvdltgg
//
LOCUS       XP_041325340             548 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 24 [Pyrgilauda ruficollis].
ACCESSION   XP_041325340
VERSION     XP_041325340.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469406.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..548
                     /product="kelch-like protein 24"
                     /calculated_mol_wt=61974
     Region          20..530
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          302..346
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          350..394
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          397..439
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..548
                     /gene="LOC121354654"
                     /coded_by="XM_041469406.1:1403..3049"
                     /db_xref="GeneID:121354654"
ORIGIN      
        1 mepaqepqel gpqaemtadt ilevgerlfq vsrrvlsvhs ryfeamffgg aresseqhiv
       61 ikgidavpfq alleftctaq vligqenvts lletadffqf drvkllcekf lerelhvsnc
      121 lglmtysqqf aftelyvsam nvalthwgdv irqeefkalp kemlvqllks ddlfisredv
      181 vfdsimiwim edpatreeef ldlvgevrvt flslsfldil vkrskraget difsrlikkl
      241 dscpppswqn pklcpyagrs ydtlyvlggk hdkeqqelfl fqpktgtwqa csplqrrnlt
      301 qyavaavgsf lfvtggyfrd efvwysvdwv liyncldncw legpamkksr nshcavgvgl
      361 ylyvlggstd egiipaverm almesewesm spmaqpverg davsvgtriy vvcgldengh
      421 vydgvqrlnt etdswdvisf splprydlci tslngalytv ggeafrfdve tdewtqvnee
      481 cltqkffmgc stvngqiyll gqrkgnsalp ivvlfdpytd vcqvidnklp cplpvhgcvs
      541 vrrfdtwa
//
LOCUS       XP_041325341             567 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 4-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325341
VERSION     XP_041325341.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469407.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="excitatory amino acid transporter 4-like isoform
                     X1"
                     /calculated_mol_wt=62392
     Region          57..523
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..567
                     /gene="LOC121354655"
                     /coded_by="XM_041469407.1:402..2105"
                     /db_xref="GeneID:121354655"
ORIGIN      
        1 mseqshvnsl flnedaakrl hadsrvqrlr qavhkraara kkrmhsitae saksffrrna
       61 fvlftiaavl lgiilafslr pyqltyrqik yfsfpgellm rmlqmlvlpl ivsslitgma
      121 sldsrvsgkm gmraiiyymv ttiiavfigi fmviiihpgk gskdklhreg rieqvqttda
      181 fmdlvrnmfp pnlveacfkq yktqystrvf trtilhssna tagvattqip vaenftsime
      241 nvthalgtis evltfeevip ipgsangvna lglvvfsmcf glmigsmkqk grplreffnc
      301 lneaimrlva iiiwyapvgi mfliagkile mddlavmggq lgmytltviv gllihalcil
      361 pllyfivthr npwvfiagll qalitalgts sssatlpitf rcleenngvd rritrfvlpv
      421 gatinmdgta lyealaaifi aqvnnyeldf gqiitisita taasigaagi pqaglvtmvi
      481 vltsvglpte ditliiavdw fldrlrtttn vlgdslgagi vehlsrheld aqdcelgnsg
      541 iqdkeqlshl vcpqndthrh srretal
//
LOCUS       XP_041325342             567 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 4-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325342
VERSION     XP_041325342.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469408.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="excitatory amino acid transporter 4-like isoform
                     X1"
                     /calculated_mol_wt=62392
     Region          57..523
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..567
                     /gene="LOC121354655"
                     /coded_by="XM_041469408.1:533..2236"
                     /db_xref="GeneID:121354655"
ORIGIN      
        1 mseqshvnsl flnedaakrl hadsrvqrlr qavhkraara kkrmhsitae saksffrrna
       61 fvlftiaavl lgiilafslr pyqltyrqik yfsfpgellm rmlqmlvlpl ivsslitgma
      121 sldsrvsgkm gmraiiyymv ttiiavfigi fmviiihpgk gskdklhreg rieqvqttda
      181 fmdlvrnmfp pnlveacfkq yktqystrvf trtilhssna tagvattqip vaenftsime
      241 nvthalgtis evltfeevip ipgsangvna lglvvfsmcf glmigsmkqk grplreffnc
      301 lneaimrlva iiiwyapvgi mfliagkile mddlavmggq lgmytltviv gllihalcil
      361 pllyfivthr npwvfiagll qalitalgts sssatlpitf rcleenngvd rritrfvlpv
      421 gatinmdgta lyealaaifi aqvnnyeldf gqiitisita taasigaagi pqaglvtmvi
      481 vltsvglpte ditliiavdw fldrlrtttn vlgdslgagi vehlsrheld aqdcelgnsg
      541 iqdkeqlshl vcpqndthrh srretal
//
LOCUS       XP_041325343             567 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 4-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325343
VERSION     XP_041325343.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469409.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="excitatory amino acid transporter 4-like isoform
                     X1"
                     /calculated_mol_wt=62392
     Region          57..523
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..567
                     /gene="LOC121354655"
                     /coded_by="XM_041469409.1:182..1885"
                     /db_xref="GeneID:121354655"
ORIGIN      
        1 mseqshvnsl flnedaakrl hadsrvqrlr qavhkraara kkrmhsitae saksffrrna
       61 fvlftiaavl lgiilafslr pyqltyrqik yfsfpgellm rmlqmlvlpl ivsslitgma
      121 sldsrvsgkm gmraiiyymv ttiiavfigi fmviiihpgk gskdklhreg rieqvqttda
      181 fmdlvrnmfp pnlveacfkq yktqystrvf trtilhssna tagvattqip vaenftsime
      241 nvthalgtis evltfeevip ipgsangvna lglvvfsmcf glmigsmkqk grplreffnc
      301 lneaimrlva iiiwyapvgi mfliagkile mddlavmggq lgmytltviv gllihalcil
      361 pllyfivthr npwvfiagll qalitalgts sssatlpitf rcleenngvd rritrfvlpv
      421 gatinmdgta lyealaaifi aqvnnyeldf gqiitisita taasigaagi pqaglvtmvi
      481 vltsvglpte ditliiavdw fldrlrtttn vlgdslgagi vehlsrheld aqdcelgnsg
      541 iqdkeqlshl vcpqndthrh srretal
//
LOCUS       XP_041325344             567 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 4-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325344
VERSION     XP_041325344.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469410.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="excitatory amino acid transporter 4-like isoform
                     X1"
                     /calculated_mol_wt=62392
     Region          57..523
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..567
                     /gene="LOC121354655"
                     /coded_by="XM_041469410.1:358..2061"
                     /db_xref="GeneID:121354655"
ORIGIN      
        1 mseqshvnsl flnedaakrl hadsrvqrlr qavhkraara kkrmhsitae saksffrrna
       61 fvlftiaavl lgiilafslr pyqltyrqik yfsfpgellm rmlqmlvlpl ivsslitgma
      121 sldsrvsgkm gmraiiyymv ttiiavfigi fmviiihpgk gskdklhreg rieqvqttda
      181 fmdlvrnmfp pnlveacfkq yktqystrvf trtilhssna tagvattqip vaenftsime
      241 nvthalgtis evltfeevip ipgsangvna lglvvfsmcf glmigsmkqk grplreffnc
      301 lneaimrlva iiiwyapvgi mfliagkile mddlavmggq lgmytltviv gllihalcil
      361 pllyfivthr npwvfiagll qalitalgts sssatlpitf rcleenngvd rritrfvlpv
      421 gatinmdgta lyealaaifi aqvnnyeldf gqiitisita taasigaagi pqaglvtmvi
      481 vltsvglpte ditliiavdw fldrlrtttn vlgdslgagi vehlsrheld aqdcelgnsg
      541 iqdkeqlshl vcpqndthrh srretal
//
LOCUS       XP_041325345             546 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 4-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325345
VERSION     XP_041325345.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469411.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..546
                     /product="excitatory amino acid transporter 4-like isoform
                     X2"
                     /calculated_mol_wt=60130
     Region          57..523
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..546
                     /gene="LOC121354655"
                     /coded_by="XM_041469411.1:400..2040"
                     /db_xref="GeneID:121354655"
ORIGIN      
        1 mseqshvnsl flnedaakrl hadsrvqrlr qavhkraara kkrmhsitae saksffrrna
       61 fvlftiaavl lgiilafslr pyqltyrqik yfsfpgellm rmlqmlvlpl ivsslitgma
      121 sldsrvsgkm gmraiiyymv ttiiavfigi fmviiihpgk gskdklhreg rieqvqttda
      181 fmdlvrnmfp pnlveacfkq yktqystrvf trtilhssna tagvattqip vaenftsime
      241 nvthalgtis evltfeevip ipgsangvna lglvvfsmcf glmigsmkqk grplreffnc
      301 lneaimrlva iiiwyapvgi mfliagkile mddlavmggq lgmytltviv gllihalcil
      361 pllyfivthr npwvfiagll qalitalgts sssatlpitf rcleenngvd rritrfvlpv
      421 gatinmdgta lyealaaifi aqvnnyeldf gqiitisita taasigaagi pqaglvtmvi
      481 vltsvglpte ditliiavdw fldrlrtttn vlgdslgagi vehlsrheld aqdceldyls
      541 nfsrkh
//
LOCUS       XP_041325346             537 aa            linear   VRT 06-MAY-2021
DEFINITION  excitatory amino acid transporter 4-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325346
VERSION     XP_041325346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..537
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..537
                     /product="excitatory amino acid transporter 4-like isoform
                     X3"
                     /calculated_mol_wt=58997
     Region          57..523
                     /region_name="GltP"
                     /note="Na+/H+-dicarboxylate symporter [Energy production
                     and conversion]; COG1301"
                     /db_xref="CDD:440912"
     CDS             1..537
                     /gene="LOC121354655"
                     /coded_by="XM_041469412.1:400..2013"
                     /db_xref="GeneID:121354655"
ORIGIN      
        1 mseqshvnsl flnedaakrl hadsrvqrlr qavhkraara kkrmhsitae saksffrrna
       61 fvlftiaavl lgiilafslr pyqltyrqik yfsfpgellm rmlqmlvlpl ivsslitgma
      121 sldsrvsgkm gmraiiyymv ttiiavfigi fmviiihpgk gskdklhreg rieqvqttda
      181 fmdlvrnmfp pnlveacfkq yktqystrvf trtilhssna tagvattqip vaenftsime
      241 nvthalgtis evltfeevip ipgsangvna lglvvfsmcf glmigsmkqk grplreffnc
      301 lneaimrlva iiiwyapvgi mfliagkile mddlavmggq lgmytltviv gllihalcil
      361 pllyfivthr npwvfiagll qalitalgts sssatlpitf rcleenngvd rritrfvlpv
      421 gatinmdgta lyealaaifi aqvnnyeldf gqiitisita taasigaagi pqaglvtmvi
      481 vltsvglpte ditliiavdw fldrlrtttn vlgdslgagi vehlsrheld aqdceld
//
LOCUS       XP_041325348             747 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 33 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325348
VERSION     XP_041325348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469414.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..747
                     /product="kelch-like protein 33 isoform X1"
                     /calculated_mol_wt=81161
     Region          32..135
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          162..281
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          281..379
                     /region_name="BACK"
                     /note="BTB And C-terminal Kelch; smart00875"
                     /db_xref="CDD:197943"
     Region          454..713
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          467..513
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          517..562
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          565..609
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          612..661
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..747
                     /gene="KLHL33"
                     /coded_by="XM_041469414.1:16..2259"
                     /db_xref="GeneID:121354657"
ORIGIN      
        1 mesmeaedaq rgkmwvaegp apeqwslqdg ahaghflava dhlrttgqlv dvavgpegdm
       61 ahavvlasvs sffqhflegr trqlcqdslp hvplppgatl wgwravltfa yggivphgqv
      121 keveeaaral gaprlvaaca lrleidhqee gpkpleeqwe tlrameqlha ngvgcdlqlq
      181 agnevipvqr lalscscdff ralftcpmre athdpadplv tglspaelhl llsfaytgav
      241 agpwpmvlea aetslryqaw glltlcldvf thgltpetvp dvlafavayg ldevvhvaen
      301 yilatfpcvv vtpafldlpa hllirllrsd glnvlhelea leaasrwlma ngdgqedlak
      361 eilssvrfal msslelkkvp svtagiadpk vlrelmvasf tpmaqlpcrv rslqevlvvc
      421 ggdkvkdnla arepsrhlwf adrylsavgl vkqvewralg hfpdgprfrh avtvvgnnly
      481 vlggkhyygv hdtlasvyry qpmddswerl asmtcgrsyf aavalgnfiy alggssgely
      541 ctdtvecydl andtwrrcqp lpmalcghaa caldgelyvs ggcdeayqcq asllryvpga
      601 pvtllapmng hraghvmeea ggqlyvaggl cqragqtgyr dqltfevysp kqniwvllsp
      661 lprahvvgga avlggellvl ggyshetyqd thlihayqpg trrwitrgtl phaytdlqac
      721 vltvppalra psclkdplrs tetpnsa
//
LOCUS       XP_041325349             734 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 33 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325349
VERSION     XP_041325349.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469415.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..734
                     /product="kelch-like protein 33 isoform X2"
                     /calculated_mol_wt=79698
     Region          19..122
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          149..268
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          268..366
                     /region_name="BACK"
                     /note="BTB And C-terminal Kelch; smart00875"
                     /db_xref="CDD:197943"
     Region          442..664
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          454..500
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          504..549
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          552..596
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          599..648
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..734
                     /gene="KLHL33"
                     /coded_by="XM_041469415.1:46..2250"
                     /db_xref="GeneID:121354657"
ORIGIN      
        1 mwvaegpape qwslqdgaha ghflavadhl rttgqlvdva vgpegdmaha vvlasvssff
       61 qhflegrtrq lcqdslphvp lppgatlwgw ravltfaygg ivphgqvkev eeaaralgap
      121 rlvaacalrl eidhqeegpk pleeqwetlr ameqlhangv gcdlqlqagn evipvqrlal
      181 scscdffral ftcpmreath dpadplvtgl spaelhllls faytgavagp wpmvleaaet
      241 slryqawgll tlcldvfthg ltpetvpdvl afavayglde vvhvaenyil atfpcvvvtp
      301 afldlpahll irllrsdgln vlhelealea asrwlmangd gqedlakeil ssvrfalmss
      361 lelkkvpsvt agiadpkvlr elmvasftpm aqlpcrvrsl qevlvvcggd kvkdnlaare
      421 psrhlwfadr ylsavglvkq vewralghfp dgprfrhavt vvgnnlyvlg gkhyygvhdt
      481 lasvyryqpm ddswerlasm tcgrsyfaav algnfiyalg gssgelyctd tvecydland
      541 twrrcqplpm alcghaacal dgelyvsggc deayqcqasl lryvpgapvt llapmnghra
      601 ghvmeeaggq lyvagglcqr agqtgyrdql tfevyspkqn iwvllsplpr ahvvggaavl
      661 ggellvlggy shetyqdthl ihayqpgtrr witrgtlpha ytdlqacvlt vppalrapsc
      721 lkdplrstet pnsa
//
LOCUS       XP_041325350             136 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325350
VERSION     XP_041325350.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469416.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..136
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..136
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex subunit 11"
                     /calculated_mol_wt=13838
     Region          <57..115
                     /region_name="Tim17"
                     /note="Tim17/Tim22/Tim23/Pmp24 family; pfam02466"
                     /db_xref="CDD:460567"
     CDS             1..136
                     /gene="NDUFA11"
                     /coded_by="XM_041469416.1:50..460"
                     /db_xref="GeneID:121354658"
ORIGIN      
        1 magywdgpeg eqcpqrtwla trvgaaaglv gaayriillr pgsalaalqt aaadsvtmat
       61 lgavfglstc lsaqvreepe dplnyfiggc aagavlgvra hsyltgttac lgfgitaalm
      121 kignkegwrl tgppkl
//
LOCUS       XP_041325351              97 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import inner membrane translocase subunit Tim13
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325351
VERSION     XP_041325351.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469417.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..97
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..97
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim13"
                     /calculated_mol_wt=10483
     Region          26..88
                     /region_name="zf-Tim10_DDP"
                     /note="Tim10/DDP family zinc finger; pfam02953"
                     /db_xref="CDD:460764"
     CDS             1..97
                     /gene="TIMM13"
                     /coded_by="XM_041469417.1:85..378"
                     /db_xref="GeneID:121354659"
ORIGIN      
        1 mesgfgsdfg sggggggkld pglimeqvkv qiavanaqel lqrmtdkcfr kcigkpggal
       61 dnseqkciam cmdrymdswn tvsraynsrl qreranm
//
LOCUS       XP_041325352             105 aa            linear   VRT 06-MAY-2021
DEFINITION  60S ribosomal protein L36 [Pyrgilauda ruficollis].
ACCESSION   XP_041325352
VERSION     XP_041325352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469418.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..105
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..105
                     /product="60S ribosomal protein L36"
                     /calculated_mol_wt=12156
     Region          4..94
                     /region_name="Ribosomal_L36e"
                     /note="Ribosomal protein L36e; pfam01158"
                     /db_xref="CDD:460088"
     CDS             1..105
                     /gene="RPL36"
                     /coded_by="XM_041469418.1:115..432"
                     /db_xref="GeneID:121354660"
ORIGIN      
        1 mairypmavg lnkgykvtkn vskprqcrrr grltkhtkfv rdmirevcgf apyerramel
       61 lkvskdkral kfikkrvgth irakrkreel snvlaamrka aakkd
//
LOCUS       XP_041325353            1074 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protease serine 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041325353
VERSION     XP_041325353.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469419.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1074
                     /product="transmembrane protease serine 9"
                     /calculated_mol_wt=116167
     Region          58..>121
                     /region_name="SEA"
                     /note="SEA domain; pfam01390"
                     /db_xref="CDD:460188"
     Region          190..419
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; smart00020"
                     /db_xref="CDD:214473"
     Site            191
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(231,280,375)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(369,395,397)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     Region          491..718
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            491
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(531,579,674)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(668,694,696)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     Region          794..829
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(799,807,819..820)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(811,815,819,825..826)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            822..826
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          842..1071
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            842
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(883,930,1024)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(1018,1044,1046)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..1074
                     /gene="TMPRSS9"
                     /coded_by="XM_041469419.1:268..3492"
                     /db_xref="GeneID:121354661"
ORIGIN      
        1 mdqlkpgaqr rrlgaccwkv taaaavagst talclgilla chssgetsfe htvelqgitf
       61 nsslqtensd yyrvltpale rlflsslqds qlnwsctgct ilgyrngnss vivhfrllft
      121 pqdsqplsst leeeafrhgl aaalhkqgfs laaygtissa sltgpnkvss hrpglksdcg
      181 srpamqtasr ivggseasrg efpwqvslre nnehfcgaai ltekwlvsaa hcftefqdpa
      241 mwaayigtts lrssdgsavk mdisqiiphp synadtadyd vavlelkrpv tftkyiqpvc
      301 lpdaghhfpt skkclisgwg ylkedflvkp eflqkatvel ldqnlcssly shvltdrmmc
      361 agylegkvds cqgdsggplv cqepsgrffl agivswgigc aearrpgvyt rvtklrdwil
      421 daisafptsi ahtvppvhfr tnsdmvsaee vntttratst tslapaasrp vtaagpqecg
      481 grpgfskpsk ivggtdasrg eipwqvslke dsrhfcgati igdrwllsaa hcfnetmpee
      541 ieahvgttsi ngtdenavkv nvtrviphpl fnpmildfdv avlelarplv fnkyiqpvcl
      601 pvamqkfpvg kkclisgwgd lqegndtkpe ilqkasvgii eqntcnflyn fsltdrmica
      661 gfmegmvdsc qgdsggplac evtpgvfyla givswgfgca qamrpgvysr itkltdwild
      721 tisqlpsggt sipsslaipr tsttaifiqp stmaagpasr ttlgtkrstt msetstalrt
      781 tetakptqtp vvpctsltfk csskvcigke npecdgvvdc sngfdehncd cgsttalafs
      841 kivggssaar gewpwqvslw lrrkehkcga vliadrwlls aahcfdiysd pkmwvaylgt
      901 pflsgidgkm ekifriykhp fynvysldyd vallelstpv vftstirpic lpdsshifhe
      961 garcfitgwg stkegglmsk hlqkaavnmi gdqackkfyp vqissrmlca gfpqgtvdsc
     1021 sgdaggplac repsgkwfla gitswgygca rpyfpgvytk vtavqgwivq nlkl
//
LOCUS       XP_041325354            1074 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protease serine 9 [Pyrgilauda ruficollis].
ACCESSION   XP_041325354
VERSION     XP_041325354.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469420.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1074
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1074
                     /product="transmembrane protease serine 9"
                     /calculated_mol_wt=116167
     Region          58..>121
                     /region_name="SEA"
                     /note="SEA domain; pfam01390"
                     /db_xref="CDD:460188"
     Region          190..419
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; smart00020"
                     /db_xref="CDD:214473"
     Site            191
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(231,280,375)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(369,395,397)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     Region          491..718
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            491
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(531,579,674)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(668,694,696)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     Region          794..829
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(799,807,819..820)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(811,815,819,825..826)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            822..826
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          842..1071
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            842
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(883,930,1024)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(1018,1044,1046)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..1074
                     /gene="TMPRSS9"
                     /coded_by="XM_041469420.1:121..3345"
                     /db_xref="GeneID:121354661"
ORIGIN      
        1 mdqlkpgaqr rrlgaccwkv taaaavagst talclgilla chssgetsfe htvelqgitf
       61 nsslqtensd yyrvltpale rlflsslqds qlnwsctgct ilgyrngnss vivhfrllft
      121 pqdsqplsst leeeafrhgl aaalhkqgfs laaygtissa sltgpnkvss hrpglksdcg
      181 srpamqtasr ivggseasrg efpwqvslre nnehfcgaai ltekwlvsaa hcftefqdpa
      241 mwaayigtts lrssdgsavk mdisqiiphp synadtadyd vavlelkrpv tftkyiqpvc
      301 lpdaghhfpt skkclisgwg ylkedflvkp eflqkatvel ldqnlcssly shvltdrmmc
      361 agylegkvds cqgdsggplv cqepsgrffl agivswgigc aearrpgvyt rvtklrdwil
      421 daisafptsi ahtvppvhfr tnsdmvsaee vntttratst tslapaasrp vtaagpqecg
      481 grpgfskpsk ivggtdasrg eipwqvslke dsrhfcgati igdrwllsaa hcfnetmpee
      541 ieahvgttsi ngtdenavkv nvtrviphpl fnpmildfdv avlelarplv fnkyiqpvcl
      601 pvamqkfpvg kkclisgwgd lqegndtkpe ilqkasvgii eqntcnflyn fsltdrmica
      661 gfmegmvdsc qgdsggplac evtpgvfyla givswgfgca qamrpgvysr itkltdwild
      721 tisqlpsggt sipsslaipr tsttaifiqp stmaagpasr ttlgtkrstt msetstalrt
      781 tetakptqtp vvpctsltfk csskvcigke npecdgvvdc sngfdehncd cgsttalafs
      841 kivggssaar gewpwqvslw lrrkehkcga vliadrwlls aahcfdiysd pkmwvaylgt
      901 pflsgidgkm ekifriykhp fynvysldyd vallelstpv vftstirpic lpdsshifhe
      961 garcfitgwg stkegglmsk hlqkaavnmi gdqackkfyp vqissrmlca gfpqgtvdsc
     1021 sgdaggplac repsgkwfla gitswgygca rpyfpgvytk vtavqgwivq nlkl
//
LOCUS       XP_041325355             597 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptide peptidase-like 2B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325355
VERSION     XP_041325355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469421.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..597
                     /product="signal peptide peptidase-like 2B isoform X1"
                     /calculated_mol_wt=66264
     Region          41..160
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            121..123
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          213..502
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..597
                     /gene="SPPL2B"
                     /coded_by="XM_041469421.1:95..1888"
                     /db_xref="GeneID:121354663"
ORIGIN      
        1 maarparlcl wlllhllpqv yceygmvhvl sekgsskgkd ycilfnsqwa hlphdlgkas
       61 llqlqdqtas vlcspsdvph ggfnnqipmv mrgnctfyek vrlaqingar gllivsrerl
      121 vppggnrsqy eeidipvall sytdmldigk sfgssvkgam yapnepvldy nmviifvmav
      181 gtvaiggywa gsrdvkkrym khkrddgaek hddetvdvtp imicvfvvmc csmlvllyff
      241 ydhlvyviig ifclaasigl ysclspfvrr fplgkcripd nnlpyfhkrp qvrmlllavf
      301 cisvsivwgi frnedqwawv lqdalgiafc lymlktirlp tfkgctllll vlfvydvffv
      361 fitpfltktg esimvevaag psdsathekl pmvlkvprln ssplalcdrp fsllgfgdil
      421 vpgllvaych rfdiqvqssr vyfvactiay gigllvtfva lalmqmgqpa llylvpctll
      481 tsfvvalwrr elamfwtgsg fakdlpqppv viapvncpql pkdssvpasq qdteqmtnpt
      541 lhvkelhgsa saeeeladts tktdqseisv ahseepaaqn kddleskcln aeqnqle
//
LOCUS       XP_041325356             508 aa            linear   VRT 06-MAY-2021
DEFINITION  signal peptide peptidase-like 2B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325356
VERSION     XP_041325356.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469422.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="signal peptide peptidase-like 2B isoform X2"
                     /calculated_mol_wt=56649
     Region          41..160
                     /region_name="PA_hSPPL_like"
                     /note="Protease-associated domain containing human signal
                     peptide peptidase-like (hSPPL)-like. This group contains
                     various PA domain-containing proteins similar to hSPPL2a
                     and 2b. These SPPLs are GxGD aspartic proteases. SPPL2a is
                     sorted to the late endosomes; cd02129"
                     /db_xref="CDD:239044"
     Site            121..123
                     /site_type="other"
                     /note="PA/protease or protease-like domain interface
                     [polypeptide binding]"
                     /db_xref="CDD:239044"
     Region          213..502
                     /region_name="Peptidase_A22B"
                     /note="Signal peptide peptidase; pfam04258"
                     /db_xref="CDD:282158"
     CDS             1..508
                     /gene="SPPL2B"
                     /coded_by="XM_041469422.1:71..1597"
                     /db_xref="GeneID:121354663"
ORIGIN      
        1 maarparlcl wlllhllpqv yceygmvhvl sekgsskgkd ycilfnsqwa hlphdlgkas
       61 llqlqdqtas vlcspsdvph ggfnnqipmv mrgnctfyek vrlaqingar gllivsrerl
      121 vppggnrsqy eeidipvall sytdmldigk sfgssvkgam yapnepvldy nmviifvmav
      181 gtvaiggywa gsrdvkkrym khkrddgaek hddetvdvtp imicvfvvmc csmlvllyff
      241 ydhlvyviig ifclaasigl ysclspfvrr fplgkcripd nnlpyfhkrp qvrmlllavf
      301 cisvsivwgi frnedqwawv lqdalgiafc lymlktirlp tfkgctllll vlfvydvffv
      361 fitpfltktg esimvevaag psdsathekl pmvlkvprln ssplalcdrp fsllgfgdil
      421 vpgllvaych rfdiqvqssr vyfvactiay gigllvtfva lalmqmgqpa llylvpctll
      481 tsfvvalwrr elamfwtgsg favntsli
//
LOCUS       XP_041325357             115 aa            linear   VRT 06-MAY-2021
DEFINITION  U6 snRNA-associated Sm-like protein LSm7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325357
VERSION     XP_041325357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469423.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..115
                     /product="U6 snRNA-associated Sm-like protein LSm7"
                     /calculated_mol_wt=12315
     Region          23..109
                     /region_name="LSm7"
                     /note="Like-Sm protein 7; cd01729"
                     /db_xref="CDD:212476"
     Site            order(25,27,30..31,36,38..40,43,45,50..57,59,81,83,85..98)
                     /site_type="other"
                     /note="hexamer interface [polypeptide binding]"
                     /db_xref="CDD:212476"
     Site            order(35..41,43..55,57..61)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212476"
     Site            order(53,55,89)
                     /site_type="other"
                     /note="putative RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212476"
     Site            85..96
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212476"
     CDS             1..115
                     /gene="LSM7"
                     /coded_by="XM_041469423.1:74..421"
                     /db_xref="GeneID:121354664"
ORIGIN      
        1 masgggggga gkmadkekkk kesildlsky idktirvkfq ggreasgvlk gfdpllnlvl
       61 dgtieymrdp ddqfkltedt rqlglvvcrg tsvvlicpqd gmeaipnpfi qqqdg
//
LOCUS       XP_041325358             715 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 53 [Pyrgilauda ruficollis].
ACCESSION   XP_041325358
VERSION     XP_041325358.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469424.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522762.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..715
                     /product="leucine-rich repeat-containing protein 53"
                     /calculated_mol_wt=77889
     Region          21..>209
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          31..50
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          54..75
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          76..91
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          99..119
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          120..143
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          144..167
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          168..191
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          192..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          216..228
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          224..281
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     CDS             1..715
                     /gene="LRRC53"
                     /coded_by="XM_041469424.1:63..2210"
                     /db_xref="GeneID:121354665"
ORIGIN      
        1 mevlaltlvt llallppaep cssemnkvkd llevnctgqa liavppdlpa dtgilllsdn
       61 rleslsttaf lslaqlqdid ltnnglvalh tgalllslke ltlshnalaa lpvleglpal
      121 thlavahnsl etlapgafrt vpqlqnldlr gnkmqqlpqe afaglralke ldlsdnllke
      181 lpkellqdlq kletlwlsgn klqtlptdff pkgrlfmyvf ltenpwhcnc dlhylqtwiq
      241 knadivyqpe rgleetkvev apekvlchsp aehrqkpiih fklncsived edeeggdeyn
      301 ygeetiekat mttfplhtfi skahttmpca itssclstlt ttrspltrps lctpctttfs
      361 pntllvvlts irapsttipv pasltvtptq tpstatilta attitlhrpa tfnnvtslpt
      421 tmssssssts ghppttlats siygslmgst gtfpttstam pstamleass ivrspcpplm
      481 santklftha ptlpplldtt hftqpacspl pappplcpcs ipgravpvlh lqaggealqw
      541 gqwvlrhccl lhwvlylasl allvltmlal agwlawmclv gqpswhqalq tlevryplle
      601 wrdstgnpmm hlssfkiplq kptfctikev dlcpevtyct ikdlgtqcsp pasysfcttk
      661 elwvhhsplh tsvkpfsrkm mvtdlsflrt psaysldrgv eaigdvrvky agntm
//
LOCUS       XP_041325360             346 aa            linear   VRT 06-MAY-2021
DEFINITION  quinone oxidoreductase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325360
VERSION     XP_041325360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="quinone oxidoreductase isoform X1"
                     /calculated_mol_wt=36865
     Region          8..346
                     /region_name="zeta_crystallin"
                     /note="Zeta-crystallin with NADP-dependent quinone
                     reductase activity (QOR); cd08253"
                     /db_xref="CDD:176215"
     Site            order(49,53,131,135,172..178,197..198,217..218,241..242,
                     246,263..264,266,286..288,332,337..338)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176215"
     CDS             1..346
                     /gene="CRYZ"
                     /coded_by="XM_041469426.1:81..1121"
                     /db_xref="GeneID:121354666"
ORIGIN      
        1 mattrsamra vrvfefggpe vlklqsdvlv pvpkenqvli kvhacgvnpv dtyirsgtya
       61 rkpalpytpg sdvagviesv gehvtafkkg drvftletls ggyaeyavaa anrvfplpdk
      121 ldfrqgaaig vpyftayral fqkqcvlqsq cqhflcsslr gcakagesvl vhgasggvgl
      181 aacqiaracg lkvlgtagte egmnvilrng ahqafnhrdp nyterikact gpggvdiiie
      241 mlsnvnldad lqllscagrv mvvgcrgrie inprdtmske ssiigvslfl ateeerreca
      301 tavldgieag wlkpvvgley plekvakahe diicssgarg kmvlll
//
LOCUS       XP_041325361             330 aa            linear   VRT 06-MAY-2021
DEFINITION  quinone oxidoreductase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325361
VERSION     XP_041325361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469427.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..330
                     /product="quinone oxidoreductase isoform X2"
                     /calculated_mol_wt=35153
     Region          18..330
                     /region_name="zeta_crystallin"
                     /note="Zeta-crystallin with NADP-dependent quinone
                     reductase activity (QOR); cd08253"
                     /db_xref="CDD:176215"
     Site            order(33,37,115,119,156..162,181..182,201..202,225..226,
                     230,247..248,250,270..272,316,321..322)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176215"
     CDS             1..330
                     /gene="CRYZ"
                     /coded_by="XM_041469427.1:28..1020"
                     /db_xref="GeneID:121354666"
ORIGIN      
        1 mnvnkclqdr mrdtaqnptp gvlikvhacg vnpvdtyirs gtyarkpalp ytpgsdvagv
       61 iesvgehvta fkkgdrvftl etlsggyaey avaaanrvfp lpdkldfrqg aaigvpyfta
      121 yralfqkqcv lqsqcqhflc sslrgcakag esvlvhgasg gvglaacqia racglkvlgt
      181 agteegmnvi lrngahqafn hrdpnyteri kactgpggvd iiiemlsnvn ldadlqllsc
      241 agrvmvvgcr grieinprdt mskessiigv slflateeer recatavldg ieagwlkpvv
      301 gleyplekva kahediicss gargkmvlll
//
LOCUS       XP_041325362             329 aa            linear   VRT 06-MAY-2021
DEFINITION  quinone oxidoreductase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325362
VERSION     XP_041325362.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469428.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="quinone oxidoreductase isoform X3"
                     /calculated_mol_wt=34902
     Region          8..329
                     /region_name="zeta_crystallin"
                     /note="Zeta-crystallin with NADP-dependent quinone
                     reductase activity (QOR); cd08253"
                     /db_xref="CDD:176215"
     Site            order(49,53,131,135,155..161,180..181,200..201,224..225,
                     229,246..247,249,269..271,315,320..321)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176215"
     CDS             1..329
                     /gene="CRYZ"
                     /coded_by="XM_041469428.1:122..1111"
                     /db_xref="GeneID:121354666"
ORIGIN      
        1 mattrsamra vrvfefggpe vlklqsdvlv pvpkenqvli kvhacgvnpv dtyirsgtya
       61 rkpalpytpg sdvagviesv gehvtafkkg drvftletls ggyaeyavaa anrvfplpdk
      121 ldfrqgaaig vpyftayral fqkgcakage svlvhgasgg vglaacqiar acglkvlgta
      181 gteegmnvil rngahqafnh rdpnyterik actgpggvdi iiemlsnvnl dadlqllsca
      241 grvmvvgcrg rieinprdtm skessiigvs lflateeerr ecatavldgi eagwlkpvvg
      301 leyplekvak ahediicssg argkmvlll
//
LOCUS       XP_041325363             346 aa            linear   VRT 06-MAY-2021
DEFINITION  quinone oxidoreductase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325363
VERSION     XP_041325363.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469429.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="quinone oxidoreductase isoform X1"
                     /calculated_mol_wt=36865
     Region          8..346
                     /region_name="zeta_crystallin"
                     /note="Zeta-crystallin with NADP-dependent quinone
                     reductase activity (QOR); cd08253"
                     /db_xref="CDD:176215"
     Site            order(49,53,131,135,172..178,197..198,217..218,241..242,
                     246,263..264,266,286..288,332,337..338)
                     /site_type="other"
                     /note="NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:176215"
     CDS             1..346
                     /gene="CRYZ"
                     /coded_by="XM_041469429.1:122..1162"
                     /db_xref="GeneID:121354666"
ORIGIN      
        1 mattrsamra vrvfefggpe vlklqsdvlv pvpkenqvli kvhacgvnpv dtyirsgtya
       61 rkpalpytpg sdvagviesv gehvtafkkg drvftletls ggyaeyavaa anrvfplpdk
      121 ldfrqgaaig vpyftayral fqkqcvlqsq cqhflcsslr gcakagesvl vhgasggvgl
      181 aacqiaracg lkvlgtagte egmnvilrng ahqafnhrdp nyterikact gpggvdiiie
      241 mlsnvnldad lqllscagrv mvvgcrgrie inprdtmske ssiigvslfl ateeerreca
      301 tavldgieag wlkpvvgley plekvakahe diicssgarg kmvlll
//
LOCUS       XP_041325364             249 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA wybutosine-synthesizing protein 3 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325364
VERSION     XP_041325364.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469430.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="tRNA wybutosine-synthesizing protein 3 homolog"
                     /calculated_mol_wt=27789
     Region          7..188
                     /region_name="TYW3"
                     /note="Methyltransferase TYW3; pfam02676"
                     /db_xref="CDD:460649"
     CDS             1..249
                     /gene="TYW3"
                     /coded_by="XM_041469430.1:1..750"
                     /db_xref="GeneID:121354667"
ORIGIN      
        1 maafarrkaq rlaqsdpsrk raldaraael vrllnarerf cttsscdgrv ivtdtdgtgi
       61 qkknctwllv thdpcakgdl mtalkkatgd vvfkfepfvl hvlcrelqda qllhsvaids
      121 gfrnsgitvg rggkitmavr sthclevpls hkgrlmvsee yieflvhvan qkmeenirri
      181 drfhkglela leaavpaetl fpkgpekshs vyvhrrkrrt areqadpsre lepqddtess
      241 lglfaeimi
//
LOCUS       XP_041325365             331 aa            linear   VRT 06-MAY-2021
DEFINITION  geranylgeranyl transferase type-2 subunit beta [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325365
VERSION     XP_041325365.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469431.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="geranylgeranyl transferase type-2 subunit beta"
                     /calculated_mol_wt=36689
     Region          18..301
                     /region_name="GGTase-II"
                     /note="Geranylgeranyltransferase type II (GGTase-II)_like
                     proteins containing the protein prenyltransferase (PTase)
                     domain, beta subunit (alpha 6 - alpha 6 barrel fold).
                     GGTase-IIs are a subgroup of the protein prenyltransferase
                     family of lipid-modifying...; cd02894"
                     /db_xref="CDD:239224"
     Site            order(41,44..45,48,52,94,96..97,99..100,144,147..148,190,
                     192,196,238,240..241,244,280,289..290)
                     /site_type="active"
                     /note="active site cavity [active]"
                     /db_xref="CDD:239224"
     Site            order(44..45,48,96..97,144,238,280)
                     /site_type="active"
                     /note="peptide binding pocket [active]"
                     /db_xref="CDD:239224"
     Site            order(48,51,144,147,190,192,196,232,235,241,244,289)
                     /site_type="lipid-binding"
                     /note="lipid binding pocket [chemical binding]"
                     /db_xref="CDD:239224"
     Site            order(139,177,187..188,193,217,220,222..223,232..234)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:239224"
     Site            order(238,240,290)
                     /site_type="other"
                     /note="Zn2+ binding site [ion binding]"
                     /db_xref="CDD:239224"
     CDS             1..331
                     /gene="RABGGTB"
                     /coded_by="XM_041469431.1:89..1084"
                     /db_xref="GeneID:121354668"
ORIGIN      
        1 mgtpqkdvii kpdapstlls ekhadyiasy gtkkddyeyc mseylrmsgv ywgltamdlm
       61 gqlhrmnkee ilsfikscqh ecggisasig hdphllytls avqililyds lhvvdvnkiv
      121 dyiqslqked gsfagdewge idtrfsfcaa atlallgkld aidvgkavef vlscmnfdgg
      181 fgcrpgsesh agqiycctgf laitdqlhqv nvdllgwwlc erqlpsggln grpeklpdvc
      241 yswwvlaslk migriqwidr eklrcfilac qdeetggfad rpgdmvdpfh tlfgiaglsl
      301 lgeeqikavn pvfcmpedvl qrinvqpelv s
//
LOCUS       XP_041325366             347 aa            linear   VRT 06-MAY-2021
DEFINITION  LIM/homeobox protein Lhx8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325366
VERSION     XP_041325366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="LIM/homeobox protein Lhx8"
                     /calculated_mol_wt=38392
     Region          65..120
                     /region_name="LIM1_Lhx7_Lhx8"
                     /note="The first LIM domain of Lhx7 and Lhx8; cd09381"
                     /db_xref="CDD:188767"
     Site            order(66,69,87,90,93,96,115,118)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188767"
     Region          127..181
                     /region_name="LIM2_Lhx7_Lhx8"
                     /note="The second LIM domain of Lhx7 and Lhx8; cd09383"
                     /db_xref="CDD:188769"
     Site            order(127,130,149,152,155,158,177,180)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188769"
     Region          217..273
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..347
                     /gene="LHX8"
                     /coded_by="XM_041469432.1:64..1107"
                     /db_xref="GeneID:121354669"
ORIGIN      
        1 mywksdpmfv crledkdlpa lggpaekasp aaadedscss saalspsssp rsmasgsgct
       61 pgkcvcsscg leivdkyllk vndlcwhvrc lscsvcrtsl grhtscyikd kdifckldyf
      121 rrygtrcsrc grhihstdwv rrakgnvyhl acfacfsckr qlstgeefal veekvlcrvh
      181 ydcmldnlkr evengngisv egallteqdv nhpkpakrar tsftadqlqv mqaqfaqdnn
      241 pdaqtlqkla ertglsrrvi qvwfqncrar hkkhvspnhs stapvtavqp srlsppmlee
      301 maysayvpqd gtmltalhsy mdahsptalg lqpllphsmt qlplsht
//
LOCUS       XP_041325368             423 aa            linear   VRT 06-MAY-2021
DEFINITION  medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325368
VERSION     XP_041325368.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469434.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..423
                     /product="medium-chain specific acyl-CoA dehydrogenase,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=46120
     Region          43..420
                     /region_name="MCAD"
                     /note="Medium chain acyl-CoA dehydrogenase; cd01157"
                     /db_xref="CDD:173846"
     Site            order(43..45,105,166,193,240..243,299,302,308,311,316,
                     318..320,322..323,326..327,329,333,337..338,340..341,344,
                     354..355,372,376,383..385,394,397,400..401,410..411,414,
                     417)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:173846"
     Site            order(126,130,160,162..163,168..169,193,195,272,279..280,
                     283,351,353,398,401..403,405,407)
                     /site_type="active"
                     /db_xref="CDD:173846"
     Site            403
                     /site_type="active"
                     /note="catalytic base [active]"
                     /db_xref="CDD:173846"
     CDS             1..423
                     /gene="ACADM"
                     /coded_by="XM_041469434.1:195..1466"
                     /db_xref="GeneID:121354670"
ORIGIN      
        1 maalratrqm lqtitgngwr sysskpaqnl hvgkpgagfs feltdeqkef qatarkfave
       61 eiipvaaqyd ktgeypvpli krawelglmn shipescggl glgsfeacli teelaygctg
      121 vqtaieansl gqmpviiagn ehqqkkylgr mteepmmcay cvtepgagsd vagiktkaek
      181 kgdeyvingq kmwitnggka nwyfllartn pdpktpaska ftgfiveads pgiqigrkem
      241 nmgqrcsdtr givfedvrvp kenvliaega gfkiamgafd ktrppvaaga vglakralde
      301 atryalerkt fgkpivehqa vsfllaemam kvelarmayq raawevdagr rntyyasiak
      361 afagdianqv aadavqifgg ngfnteypve klmrdakiyq iyegtaqiqr miiarehvgk
      421 fka
//
LOCUS       XP_041325369             340 aa            linear   VRT 06-MAY-2021
DEFINITION  medium-chain specific acyl-CoA dehydrogenase, mitochondrial isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325369
VERSION     XP_041325369.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469435.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="medium-chain specific acyl-CoA dehydrogenase,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=36904
     Region          43..337
                     /region_name="ACAD"
                     /note="Acyl-CoA dehydrogenase; cl09933"
                     /db_xref="CDD:447864"
     Site            order(130,160,162,193,195,318..320,322,324)
                     /site_type="active"
                     /db_xref="CDD:173838"
     CDS             1..340
                     /gene="ACADM"
                     /coded_by="XM_041469435.1:197..1219"
                     /db_xref="GeneID:121354670"
ORIGIN      
        1 maalratrqm lqtitgngwr sysskpaqnl hvgkpgagfs feltdeqkef qatarkfave
       61 eiipvaaqyd ktgeypvpli krawelglmn shipescggl glgsfeacli teelaygctg
      121 vqtaieansl gqmpviiagn ehqqkkylgr mteepmmcay cvtepgagsd vagiktkaek
      181 kgdeyvingq kmwitnggka nwyfllartn pdpktpaska ftgfiveads pgiqigrkem
      241 nmgqrcsdtr givfedvrvp kenvliaega gfkiamgafd ktrppvaaga vglakralde
      301 atryalerkt fgkpiveiye gtaqiqrmii arehvgkfka
//
LOCUS       XP_041325370             178 aa            linear   VRT 06-MAY-2021
DEFINITION  N-alpha-acetyltransferase 20 [Pyrgilauda ruficollis].
ACCESSION   XP_041325370
VERSION     XP_041325370.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469436.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="N-alpha-acetyltransferase 20"
                     /calculated_mol_wt=20168
     Region          12..128
                     /region_name="Acetyltransf_1"
                     /note="Acetyltransferase (GNAT) family; pfam00583"
                     /db_xref="CDD:395465"
     Site            order(77..79,89..90)
                     /site_type="other"
                     /note="Coenzyme A binding pocket [chemical binding]"
                     /db_xref="CDD:173926"
     CDS             1..178
                     /gene="NAA20"
                     /coded_by="XM_041469436.1:240..776"
                     /db_xref="GeneID:121354671"
ORIGIN      
        1 mttlraftcd dlfrfnninl dpltetygip fylqylahwp eyfivaeapg gelmgyimgk
       61 aegsvareew hghvtalsva pefrrlglaa klmelleeis ekkggffvdl fvrvsnqvav
      121 nmykqlgysv yrtvleyysa ssgepdeday dmrkalsrdt ekksviplph pvrpedie
//
LOCUS       XP_041325371             352 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal growth regulator 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325371
VERSION     XP_041325371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469437.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="neuronal growth regulator 1"
                     /calculated_mol_wt=38092
     Region          43..133
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          54..58
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          67..70
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          99..103
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          113..118
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          126..129
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          143..219
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          154..158
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          167..171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          184..188
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          198..203
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          212..215
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          233..310
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          239..243
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          252..256
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          275..282
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          292..297
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..352
                     /gene="NEGR1"
                     /coded_by="XM_041469437.1:180..1238"
                     /db_xref="GeneID:121354672"
ORIGIN      
        1 mvpllrsagg shqwlavvfl glcwflppgr faapggdfpg savdnlvvrk gdtavlrcyl
       61 edgaskgawl nrssiifags dkwsvdprvs iamsnhkeys lqiqdvdvtd dgpytcsvqt
      121 qhtprtmqvh ltvqvspkif rissdivvne gsnvtlvcla tgkpepsisw rhispsakpf
      181 esgqyldiyg itrdqageye csaendvsvp dvkkvkvtvn fvptiqelks sgvvlggngl
      241 ircegagvpa pvfewyrger klingqqgit iknystrsll tvtnvteehf gnytcvaank
      301 lgttnaslpl nppstaqygi tghaevlfsc wslvltlssl ssifylknil lh
//
LOCUS       XP_041325372             715 aa            linear   VRT 06-MAY-2021
DEFINITION  choline transporter-like protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325372
VERSION     XP_041325372.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469438.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..715
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..715
                     /product="choline transporter-like protein 5"
                     /calculated_mol_wt=81394
     Region          326..683
                     /region_name="Choline_transpo"
                     /note="Plasma-membrane choline transporter; pfam04515"
                     /db_xref="CDD:461337"
     CDS             1..715
                     /gene="SLC44A5"
                     /coded_by="XM_041469438.1:142..2289"
                     /db_xref="GeneID:121354673"
ORIGIN      
        1 markgeasah lygeprkfdp kfrgpihnrh ctdiiccvif ivvilgyial gvvawvhgdp
       61 rkviyptdsy gqfcgqrdtl nqnktilfyf nilkcaspvv linlqcpttq lcvskcpdrf
      121 atyidvqasy ryrpdqwnyf rqfckpgfnn prksvaqvlr dedcpsmiip srpflkrcfp
      181 dfstkngvlt vanqttfkdg rgktrnvtdl reaanginnv ldarsvgmki fedyaiswyw
      241 iliglfiamm lsllflvllr ftagvlfwif ifgvigiigy giwhcyweyd hlkgipgsdl
      301 tvydigfqtd fkvylqlrqt wlafmiilcv veviiilmli flrnririai allkegsrai
      361 gyimstlfyp ivtflliaic isywavtavf latsgepvyk vmanqtlcky anltcdpetf
      421 nttnvtklcp gaqctfafyg geslyhkyif ifqlanafvf lwlvnfaial gqctlagafa
      481 syywayrkpa diplwplfss fgrairyhtg slafgalila ivqlirvile yldhklkgtq
      541 nsftrfllcc lkccfwclek flkfinrnay imiaiygknf ctsakeaffl lmrnvvrvav
      601 ldkvtdfllf lgkilvaggv gvlafffftq ripvfaqevp mlnyywvpll tviigsylva
      661 hgffsvyamc vdtlflcfce dlerndgsta kpyfmsaslh rilgkkklsp kkasg
//
LOCUS       XP_041325373            1547 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: glutamate-rich protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325373
VERSION     XP_041325373.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469439.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 17% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1547
                     /product="LOW QUALITY PROTEIN: glutamate-rich protein 3"
                     /calculated_mol_wt=162181
     Region          298..407
                     /region_name="DUF4590"
                     /note="Domain of unknown function (DUF4590); pfam15257"
                     /db_xref="CDD:464597"
     Region          <478..655
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          <949..>1152
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          <1051..>1262
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          <1314..1455
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..1547
                     /gene="ERICH3"
                     /coded_by="XM_041469439.1:1..4644"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121354674"
ORIGIN      
        1 msapqprile tynsltdkhl vgyfsnarir rhlqksglis rsgriipeke yrlnalrrdh
       61 qrhvqeclad aiyhkvldie hhhqlglkkr ldysmrkemm qpvkmeqsmg evvhmysphp
      121 piaprnhhal cplvsgertg rsqqsslrpk tapgdvqqpp rlqpllgwaa agsvskaskq
      181 kchalehyqq facggassel tfrnpmdyma gvspyqppas krrrrrvpvp pprphvgdrc
      241 ipgirrglpv erwfhpttgf neqflinntk gfpksplcsn alvtmiylgk skhvslrdyk
      301 deikvyqqyc gtenicvykg dllegdtfqf iskrylgypf sltfylnglq vdrlscccey
      361 kgfqckrpar lrrkntyfrv lhvagappcy rcflamgldk klfppkrkik yytrphmcsc
      421 spycahsepc dssvvqksie gsmsltipsq eesvqtidet leseeessee dddddeeeee
      481 eetedqsfee tedtttqent seseydedfe adeevneegq tgnqikgmse sssddkthnl
      541 dygkesetss qkalqasgse kdesggysgd rdseddvper rpadsfssms tqcstetdsr
      601 aemkadnvkc kedcniksts dsaahahygn engekkllrv eenqdssale nkgideaekt
      661 kpedltared trifhenima mqhenpegng efkhtgsges nmneeekcpp vpwesrvlns
      721 edgneespcg eyspffedck pvqeeiakat endhpvnsdp epgdlcasee ekntantehg
      781 aseaaggspl aegrrspdvq eaaapaagpg qgleqdgaae ggagsreaag kaagvadsls
      841 ragtgaalre sapeehpqgk gageavkrgt evspgeqevl legmereval gtaggegpag
      901 alparqadra vprgeegaag tgeeeaaeeg pkgavgppae eeegeavsga geslgqggsa
      961 gkdtmvgavs egeepvedad vaadgkarav gpeggkvvqe dfsegeeamg epgalrealg
     1021 dvetgeamsg gegfvkpsqf sqlkvsgeew memgkavpga aaapesaqal qrgentmees
     1081 veadkgpvld vapelgalgg argdpvtegs seeerlavqe eegaaealrs gnpsegskae
     1141 teravegkpe gevvggsaga agagsgdeee gadgaagske paagtegwlr cgqvtgegrc
     1201 pgegvvgeaa ppapglcgsr agepglvaia vlggragrga laggpaeaga ggvgtgavaq
     1261 egvigavlga qsgtgaagaq eaaagepgra geglagapga ggaaggcegr qreagagrlg
     1321 pprhrevlga rprgeepaae scpstpgpgd raaapsgtgg saggegpcpg tpaqlaapep
     1381 gtargkdgrq eqgmeqaaak aegeqpcgnt reggvagvsa ragaaagage qrqrspvggs
     1441 pgvpaaagag qrsrssrqck lrpthhvlrt gwgrnsalsf fcspsvlcpv acpqlsvalc
     1501 rlgchsslhs vghtatchvs leqllsvqqt cnelvfaspg nstpleg
//
LOCUS       XP_041325374             824 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase TNNI3K [Pyrgilauda ruficollis].
ACCESSION   XP_041325374
VERSION     XP_041325374.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469440.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..824
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..824
                     /product="serine/threonine-protein kinase TNNI3K"
                     /calculated_mol_wt=91007
     Region          87..341
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          100..131
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          136..164
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(139..140,143..145,147..148,152,155,164,166,168,
                     172..173,176..178,180..181,185,188,197,199,201,205..206,
                     209..211,213..214,218,221,232)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          166..197
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          199..232
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(269,271,275..276,279..281,283..284,288,291,302,304,
                     306,310..311,314..316,319..320,324,328,337,339,341,
                     345..346,349..351,353..354,358,361)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          269..302
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          304..337
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          309..401
                     /region_name="Ank_2"
                     /note="Ankyrin repeats (3 copies); pfam12796"
                     /db_xref="CDD:463710"
     Region          339..369
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          469..713
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(469..472,475,477,488,490,522,539..542,588,592..593,
                     595,605..606)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270966"
     CDS             1..824
                     /gene="LOC121354675"
                     /coded_by="XM_041469440.1:94..2568"
                     /db_xref="GeneID:121354675"
ORIGIN      
        1 mgnyksrptq tctdewkkkv sesyatvter leddlqikek elaelkhvfs sdeafckvnl
       61 nyrtenglsl lhlccvcggn kshirtlmlk glrpsrltrn gftalhlaay kddaelltal
      121 lhggadiqqv gygaltalhv atiaghrkav dillqhgayv nvqdavfftp lhiaaycghe
      181 qvthlllkfg advnasgevg drplhlaaak gflnitkllm eegskadvna qdnedhvplh
      241 fcsrfghhdi vkfllqssfe vqphvvniyg dtplhlacyn gkfevvkeii qlsgtesltk
      301 enifsetafh sactygknie lvkflldqnv vsinhqgrdg htglhcacyh ghirlvqfll
      361 dngadmnlva cdpsrssgek deqtclmway ekghdaivtl lkhykrpqde spcneysqpg
      421 gdgsyvsvps plgkiksmtk ekadvlllra glpshfhlql seiefheiig sgsfgkvykg
      481 rcrnkivaik ryrantycsk sdvdmfcrev silcrlnhpc viqfvgacld dpsqfaivtq
      541 yisggslfsl lheqkrildl qskliiavdv akgmeylhnl tqpiihrdln shnillyedg
      601 havvadfges rflqsldedn mtkqpgvcff cffecshhps yqcgpgwvtp gadgclwlcp
      661 aaaaaadmay hhirppigys ipkpisallm rgwnacpegr pefsevvtkl eeclcnielm
      721 spassnssgs lspssssdcl varggpgrsh vaalrsrfel eyavnaraya awaqrtgqpp
      781 sqglslddmr rnfqyppvdk ngyvsdplst mrfhscsssl edss
//
LOCUS       XP_041325375             693 aa            linear   VRT 06-MAY-2021
DEFINITION  fucose-1-phosphate guanylyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041325375
VERSION     XP_041325375.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469441.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522873.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..693
                     /product="fucose-1-phosphate guanylyltransferase"
                     /calculated_mol_wt=75701
     Region          206..623
                     /region_name="Fucokinase"
                     /note="L-fucokinase; pfam07959"
                     /db_xref="CDD:462323"
     CDS             1..693
                     /gene="FPGT"
                     /coded_by="XM_041469441.1:1..2082"
                     /db_xref="GeneID:121354676"
ORIGIN      
        1 miasgedetg kpykydclak efenmetvse iemkslsert gassllgaaa spercgcgrr
       61 sgqggqrage sgrgsdsapq riykpgarlh prrsrarqsr agpgragpcr rglsgplptg
      121 aaarpgelwd vvvltaadaa qagafreqla eklrreqlpr avrylvcadp pgprignggs
      181 tlhalrclee qygdqwtsft vllihsggys qrlpnasalg kiftalplgd pvyqmlelkl
      241 amyidfprhm kpgvlitcsd dielystgvt etitfdrpgf talahpsdla vgtthgvfvl
      301 dpssfsgkgg leygscyrfl hkpdletmqq sgavcvrgdr pqlsspggcg dsatasecvy
      361 tdsvfyidhs taqqllefyk hvgtlcceid aygdflqalg pgatpdytkn tnnvskedsg
      421 lvamrqqlys llqgtalnvi vlnnsqfyhi gttqeylfhf taesklryel nlqpvafsif
      481 pdtaktldhl sviqsvlepg cvvgpgsvie ysrigpevsv grgsivsgsh infnvdvpsn
      541 cflssvsvki tdrveyvtmv fsvgddlkks vkllsdihsl qffgaslpec ldlwsleasd
      601 qlfssedtrl glwtarifpv cstlsesvrm slnmlnsvqh ksafklngfq llsvqemlty
      661 kdiedmlnfr kqiydeiclq rqkersdyrm kst
//
LOCUS       XP_041325376             705 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protocadherin gamma-B5-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325376
VERSION     XP_041325376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469442.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522929.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 1% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..705
                     /product="LOW QUALITY PROTEIN: protocadherin
                     gamma-B5-like"
                     /calculated_mol_wt=73711
     Region          <2..83
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          91..188
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(98..99,153,155,184,186..187)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          201..293
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(203..204,256,258,289,291..292)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          302..403
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(308..309,366,368,399,401..402)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          435..521
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..705
                     /gene="LOC121354679"
                     /coded_by="XM_041469442.1:13..2130"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121354679"
ORIGIN      
        1 mardadvgsn slltyqltsp ssfslavten pdgskqpelv leraldrekq ssfelvltav
       61 dsgepmrsgt vqvrinvtda ndnppvfskr vyearvaenl slgslvlrvq atdadtgsng
      121 rvsysfgnag qhscfxftvd sdsgevrtvg pldfeeknky vfgleatdgg gltahckaqi
      181 dvtdendnap ditilslssp vpedapagtv vallkvrdrd sgengqvsce lsgeaplsiv
      241 assggsykvv tasaldreqa sehrvtvvar drgrpalwss telvlevsdv ndnapvfeea
      301 aysayvaenn aagalvlrvq ardadagang rvsywlaggs agaagaaplv svearsgaly
      361 aqrsldyeqc reftvavraq dggsparsst atvrvfvldr ndnaprvlwp aaagggaaaa
      421 pgeapgaaat pfevvprsae agylvakvva vdadagrnaw lsyelvpase palfrvglhs
      481 gevrtaravs erdaakqrvv avvkdhgqpa lsatatlhvv laeslqealp elserpagae
      541 aaaaaelqfy lvlalallsa llvlsvalav larlrragpp avlrclgaqr fslagaafpa
      601 dfcegtlpys ynlcvaapar avpeaawppp pvpvlsaeel lggdscekps pntnlpfeep
      661 pansdalqvc kgwasslfks frivvifprv fsawsqwlfv icipr
//
LOCUS       XP_041325377             129 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G protein-coupled receptor E5-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325377
VERSION     XP_041325377.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469443.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522951.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 21% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>129
                     /product="adhesion G protein-coupled receptor E5-like"
     Region          <1..>107
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          25..41
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320554"
     Region          60..83
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320554"
     CDS             1..129
                     /gene="LOC121354680"
                     /coded_by="XM_041469443.1:55..>441"
                     /db_xref="GeneID:121354680"
ORIGIN      
        1 malqglhlhv llvqvfppaw lrprcllglg ygpaaaivgl saaafpggyg thqycwlsle
       61 rgfrwsfqgp vivicaanaa ilvvtlwklv qkfhevnpdm ghlrrtrcwl slergfrwsf
      121 qgpvivica
//
LOCUS       XP_041325379             366 aa            linear   VRT 06-MAY-2021
DEFINITION  histone-lysine N-methyltransferase SETD7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325379
VERSION     XP_041325379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469445.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..366
                     /product="histone-lysine N-methyltransferase SETD7"
                     /calculated_mol_wt=40455
     Region          <19..132
                     /region_name="COG4642"
                     /note="Uncharacterized conserved protein [Function
                     unknown]"
                     /db_xref="CDD:443680"
     Region          208..337
                     /region_name="SET_SETD7"
                     /note="SET domain found in SET domain-containing protein 7
                     (SETD7) and similar proteins; cd10530"
                     /db_xref="CDD:380928"
     Site            order(223,226..228,245,252,255..256,258,260,263..268,271,
                     274,293..297,305,317,335..337)
                     /site_type="active"
                     /db_xref="CDD:380928"
     Site            order(223,225..228,245,264..265,293..297,305,335)
                     /site_type="other"
                     /note="SAM binding site"
                     /db_xref="CDD:380928"
     Site            order(245,252,255..256,258,260,263..268,293,305,317,
                     335..337)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:380928"
     CDS             1..366
                     /gene="SETD7"
                     /coded_by="XM_041469445.1:81..1181"
                     /db_xref="GeneID:121354681"
ORIGIN      
        1 mdsdeetlee vveghldddg lphgfctvty sstdrfegtf vhgekngrgk ffffdgstle
       61 gyyvddalqg qgiytyedgv vlhgtyvdge lngpaqeydn dgrlifkgqy kdnirhgicw
      121 iyypdggslv gevnedgemt gekiayvypd gktaysgrfi dgemieaklt tltavedgkp
      181 qfevvpgspv ysfdkstssc istnallpdp yeservyvdv slissagegl fskiaaeast
      241 vmsfyngvri thqevdsrdw alngntisld detvidvpep ynhaakycas lghkanhsft
      301 pnctyepfvh prfgpikcir tiravekdee ltvaygydhn pvgqngpeap ewyqlelkaf
      361 qaaqqk
//
LOCUS       XP_041325380             595 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325380
VERSION     XP_041325380.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469446.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..595
                     /product="ETS-related transcription factor Elf-2 isoform
                     X1"
                     /calculated_mol_wt=64267
     Region          3..108
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          209..289
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..595
                     /gene="ELF2"
                     /coded_by="XM_041469446.1:143..1930"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mtsvvidngg palefdsnei knqeenepvs efpavvvepv psarleqgya aqvlvyddet
       61 ylmqdvaeeq eietetvetv easvhgsnvp ctdktieaae allhmesptc lrdarspvev
      121 fvppcvstpe fihaamrpdv itetvvevst eeseqmdvsp iptspdihep mkkkkagrkp
      181 ktqqsalsdg spdlgikkkp regkgnttyl weflldllqd kntcpryikw tqrekgifkl
      241 vdskavsklw gkhknkpdmn yetmgralry yyqrgilakv egqrlvyqfk empknivvid
      301 ddrsescned lsmptdeksl ervslsaenl lkaapsargg knssqlsctr tekavtrvvn
      361 iaspahdtss shpstttatv pattaprtvr vamqvpvvmt slgqkistva vqsvnagspl
      421 isntspttat tpkvviqtip tvmpasaeng dkitmqptki itipatqltq cqlqtktsls
      481 gsgsinivga plavraltpv siahgtpvmr lsvpaqqasg qtpprvisav lkgpevksdi
      541 aalkqecevk tlqlvkeekp vdgsktvthv vvvstpsaia lpvtvktegi itcek
//
LOCUS       XP_041325381             595 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325381
VERSION     XP_041325381.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469447.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..595
                     /product="ETS-related transcription factor Elf-2 isoform
                     X1"
                     /calculated_mol_wt=64267
     Region          3..108
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          209..289
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..595
                     /gene="ELF2"
                     /coded_by="XM_041469447.1:183..1970"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mtsvvidngg palefdsnei knqeenepvs efpavvvepv psarleqgya aqvlvyddet
       61 ylmqdvaeeq eietetvetv easvhgsnvp ctdktieaae allhmesptc lrdarspvev
      121 fvppcvstpe fihaamrpdv itetvvevst eeseqmdvsp iptspdihep mkkkkagrkp
      181 ktqqsalsdg spdlgikkkp regkgnttyl weflldllqd kntcpryikw tqrekgifkl
      241 vdskavsklw gkhknkpdmn yetmgralry yyqrgilakv egqrlvyqfk empknivvid
      301 ddrsescned lsmptdeksl ervslsaenl lkaapsargg knssqlsctr tekavtrvvn
      361 iaspahdtss shpstttatv pattaprtvr vamqvpvvmt slgqkistva vqsvnagspl
      421 isntspttat tpkvviqtip tvmpasaeng dkitmqptki itipatqltq cqlqtktsls
      481 gsgsinivga plavraltpv siahgtpvmr lsvpaqqasg qtpprvisav lkgpevksdi
      541 aalkqecevk tlqlvkeekp vdgsktvthv vvvstpsaia lpvtvktegi itcek
//
LOCUS       XP_041325382             594 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325382
VERSION     XP_041325382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469448.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="ETS-related transcription factor Elf-2 isoform
                     X2"
                     /calculated_mol_wt=64167
     Region          3..108
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          208..288
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..594
                     /gene="ELF2"
                     /coded_by="XM_041469448.1:144..1928"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mtsvvidngg palefdsnei knqeenepvs efpavvvepv psarleqgya aqvlvyddet
       61 ylmqdvaeeq eietetvetv easvhgsnvp ctdktieaae allhmesptc lrdarspevf
      121 vppcvstpef ihaamrpdvi tetvvevste eseqmdvspi ptspdihepm kkkkagrkpk
      181 tqqsalsdgs pdlgikkkpr egkgnttylw eflldllqdk ntcpryikwt qrekgifklv
      241 dskavsklwg khknkpdmny etmgralryy yqrgilakve gqrlvyqfke mpknivvidd
      301 drsescnedl smptdeksle rvslsaenll kaapsarggk nssqlsctrt ekavtrvvni
      361 aspahdtsss hpstttatvp attaprtvrv amqvpvvmts lgqkistvav qsvnagspli
      421 sntspttatt pkvviqtipt vmpasaengd kitmqptkii tipatqltqc qlqtktslsg
      481 sgsinivgap lavraltpvs iahgtpvmrl svpaqqasgq tpprvisavl kgpevksdia
      541 alkqecevkt lqlvkeekpv dgsktvthvv vvstpsaial pvtvktegii tcek
//
LOCUS       XP_041325384             535 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325384
VERSION     XP_041325384.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469450.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..535
                     /product="ETS-related transcription factor Elf-2 isoform
                     X3"
                     /calculated_mol_wt=57525
     Region          <14..48
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          149..229
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..535
                     /gene="ELF2"
                     /coded_by="XM_041469450.1:116..1723"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 maasvhegpt nqldllirav easvhgsnvp ctdktieaae allhmesptc lrdarspvev
       61 fvppcvstpe fihaamrpdv itetvvevst eeseqmdvsp iptspdihep mkkkkagrkp
      121 ktqqsalsdg spdlgikkkp regkgnttyl weflldllqd kntcpryikw tqrekgifkl
      181 vdskavsklw gkhknkpdmn yetmgralry yyqrgilakv egqrlvyqfk empknivvid
      241 ddrsescned lsmptdeksl ervslsaenl lkaapsargg knssqlsctr tekavtrvvn
      301 iaspahdtss shpstttatv pattaprtvr vamqvpvvmt slgqkistva vqsvnagspl
      361 isntspttat tpkvviqtip tvmpasaeng dkitmqptki itipatqltq cqlqtktsls
      421 gsgsinivga plavraltpv siahgtpvmr lsvpaqqasg qtpprvisav lkgpevksdi
      481 aalkqecevk tlqlvkeekp vdgsktvthv vvvstpsaia lpvtvktegi itcek
//
LOCUS       XP_041325385             534 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325385
VERSION     XP_041325385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="ETS-related transcription factor Elf-2 isoform
                     X4"
                     /calculated_mol_wt=57426
     Region          <14..48
                     /region_name="Elf-1_N"
                     /note="Transcription factor protein N terminal; pfam12310"
                     /db_xref="CDD:463529"
     Region          148..228
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..534
                     /gene="ELF2"
                     /coded_by="XM_041469451.1:117..1721"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 maasvhegpt nqldllirav easvhgsnvp ctdktieaae allhmesptc lrdarspevf
       61 vppcvstpef ihaamrpdvi tetvvevste eseqmdvspi ptspdihepm kkkkagrkpk
      121 tqqsalsdgs pdlgikkkpr egkgnttylw eflldllqdk ntcpryikwt qrekgifklv
      181 dskavsklwg khknkpdmny etmgralryy yqrgilakve gqrlvyqfke mpknivvidd
      241 drsescnedl smptdeksle rvslsaenll kaapsarggk nssqlsctrt ekavtrvvni
      301 aspahdtsss hpstttatvp attaprtvrv amqvpvvmts lgqkistvav qsvnagspli
      361 sntspttatt pkvviqtipt vmpasaengd kitmqptkii tipatqltqc qlqtktslsg
      421 sgsinivgap lavraltpvs iahgtpvmrl svpaqqasgq tpprvisavl kgpevksdia
      481 alkqecevkt lqlvkeekpv dgsktvthvv vvstpsaial pvtvktegii tcek
//
LOCUS       XP_041325386             491 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325386
VERSION     XP_041325386.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469452.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="ETS-related transcription factor Elf-2 isoform
                     X5"
                     /calculated_mol_wt=52933
     Region          105..185
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..491
                     /gene="ELF2"
                     /coded_by="XM_041469452.1:126..1601"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mesptclrda rspvevfvpp cvstpefiha amrpdvitet vvevsteese qmdvspipts
       61 pdihepmkkk kagrkpktqq salsdgspdl gikkkpregk gnttylwefl ldllqdkntc
      121 pryikwtqre kgifklvdsk avsklwgkhk nkpdmnyetm gralryyyqr gilakvegqr
      181 lvyqfkempk nivvidddrs escnedlsmp tdekslervs lsaenllkaa psarggknss
      241 qlsctrteka vtrvvniasp ahdtssshps tttatvpatt aprtvrvamq vpvvmtslgq
      301 kistvavqsv nagsplisnt spttattpkv viqtiptvmp asaengdkit mqptkiitip
      361 atqltqcqlq tktslsgsgs inivgaplav raltpvsiah gtpvmrlsvp aqqasgqtpp
      421 rvisavlkgp evksdiaalk qecevktlql vkeekpvdgs ktvthvvvvs tpsaialpvt
      481 vktegiitce k
//
LOCUS       XP_041325387             491 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325387
VERSION     XP_041325387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469453.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="ETS-related transcription factor Elf-2 isoform
                     X5"
                     /calculated_mol_wt=52933
     Region          105..185
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..491
                     /gene="ELF2"
                     /coded_by="XM_041469453.1:271..1746"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mesptclrda rspvevfvpp cvstpefiha amrpdvitet vvevsteese qmdvspipts
       61 pdihepmkkk kagrkpktqq salsdgspdl gikkkpregk gnttylwefl ldllqdkntc
      121 pryikwtqre kgifklvdsk avsklwgkhk nkpdmnyetm gralryyyqr gilakvegqr
      181 lvyqfkempk nivvidddrs escnedlsmp tdekslervs lsaenllkaa psarggknss
      241 qlsctrteka vtrvvniasp ahdtssshps tttatvpatt aprtvrvamq vpvvmtslgq
      301 kistvavqsv nagsplisnt spttattpkv viqtiptvmp asaengdkit mqptkiitip
      361 atqltqcqlq tktslsgsgs inivgaplav raltpvsiah gtpvmrlsvp aqqasgqtpp
      421 rvisavlkgp evksdiaalk qecevktlql vkeekpvdgs ktvthvvvvs tpsaialpvt
      481 vktegiitce k
//
LOCUS       XP_041325388             491 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325388
VERSION     XP_041325388.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469454.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="ETS-related transcription factor Elf-2 isoform
                     X5"
                     /calculated_mol_wt=52933
     Region          105..185
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..491
                     /gene="ELF2"
                     /coded_by="XM_041469454.1:336..1811"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mesptclrda rspvevfvpp cvstpefiha amrpdvitet vvevsteese qmdvspipts
       61 pdihepmkkk kagrkpktqq salsdgspdl gikkkpregk gnttylwefl ldllqdkntc
      121 pryikwtqre kgifklvdsk avsklwgkhk nkpdmnyetm gralryyyqr gilakvegqr
      181 lvyqfkempk nivvidddrs escnedlsmp tdekslervs lsaenllkaa psarggknss
      241 qlsctrteka vtrvvniasp ahdtssshps tttatvpatt aprtvrvamq vpvvmtslgq
      301 kistvavqsv nagsplisnt spttattpkv viqtiptvmp asaengdkit mqptkiitip
      361 atqltqcqlq tktslsgsgs inivgaplav raltpvsiah gtpvmrlsvp aqqasgqtpp
      421 rvisavlkgp evksdiaalk qecevktlql vkeekpvdgs ktvthvvvvs tpsaialpvt
      481 vktegiitce k
//
LOCUS       XP_041325390             491 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325390
VERSION     XP_041325390.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469456.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="ETS-related transcription factor Elf-2 isoform
                     X5"
                     /calculated_mol_wt=52933
     Region          105..185
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..491
                     /gene="ELF2"
                     /coded_by="XM_041469456.1:187..1662"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mesptclrda rspvevfvpp cvstpefiha amrpdvitet vvevsteese qmdvspipts
       61 pdihepmkkk kagrkpktqq salsdgspdl gikkkpregk gnttylwefl ldllqdkntc
      121 pryikwtqre kgifklvdsk avsklwgkhk nkpdmnyetm gralryyyqr gilakvegqr
      181 lvyqfkempk nivvidddrs escnedlsmp tdekslervs lsaenllkaa psarggknss
      241 qlsctrteka vtrvvniasp ahdtssshps tttatvpatt aprtvrvamq vpvvmtslgq
      301 kistvavqsv nagsplisnt spttattpkv viqtiptvmp asaengdkit mqptkiitip
      361 atqltqcqlq tktslsgsgs inivgaplav raltpvsiah gtpvmrlsvp aqqasgqtpp
      421 rvisavlkgp evksdiaalk qecevktlql vkeekpvdgs ktvthvvvvs tpsaialpvt
      481 vktegiitce k
//
LOCUS       XP_041325391             490 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS-related transcription factor Elf-2 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325391
VERSION     XP_041325391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="ETS-related transcription factor Elf-2 isoform
                     X6"
                     /calculated_mol_wt=52834
     Region          104..184
                     /region_name="Ets"
                     /note="Ets-domain; pfam00178"
                     /db_xref="CDD:459700"
     CDS             1..490
                     /gene="ELF2"
                     /coded_by="XM_041469457.1:126..1598"
                     /db_xref="GeneID:121354682"
ORIGIN      
        1 mesptclrda rspevfvppc vstpefihaa mrpdvitetv vevsteeseq mdvspiptsp
       61 dihepmkkkk agrkpktqqs alsdgspdlg ikkkpregkg nttylwefll dllqdkntcp
      121 ryikwtqrek gifklvdska vsklwgkhkn kpdmnyetmg ralryyyqrg ilakvegqrl
      181 vyqfkempkn ivvidddrse scnedlsmpt dekslervsl saenllkaap sarggknssq
      241 lsctrtekav trvvniaspa hdtssshpst ttatvpatta prtvrvamqv pvvmtslgqk
      301 istvavqsvn agsplisnts pttattpkvv iqtiptvmpa saengdkitm qptkiitipa
      361 tqltqcqlqt ktslsgsgsi nivgaplavr altpvsiahg tpvmrlsvpa qqasgqtppr
      421 visavlkgpe vksdiaalkq ecevktlqlv keekpvdgsk tvthvvvvst psaialpvtv
      481 ktegiitcek
//
LOCUS       XP_041325392             228 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-33B [Pyrgilauda ruficollis].
ACCESSION   XP_041325392
VERSION     XP_041325392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="ras-related protein Rab-33B"
                     /calculated_mol_wt=25575
     Region          30..199
                     /region_name="Rab33B_Rab33A"
                     /note="Rab GTPase family 33 includes Rab33A and Rab33B;
                     cd04115"
                     /db_xref="CDD:133315"
     Site            32..33
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:133315"
     Site            38..45
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133315"
     Site            order(40..46,56,60,63,89,146..147,149..150,176..178)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133315"
     Site            order(46..57,61..62)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:133315"
     Site            order(56,61..69)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133315"
     Site            order(61,65..72,79,81)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133315"
     Site            63
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133315"
     Site            order(64,66..68,83,85,92..93,97,101,103..106,197)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133315"
     Site            order(64..65,67,85..86,93,96,98..100)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133315"
     Site            64..68
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:133315"
     Site            81..85
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:133315"
     Site            86..89
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133315"
     Site            order(89,91..101)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133315"
     Site            92..97
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:133315"
     Site            101..105
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:133315"
     Site            110..115
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:133315"
     Site            139..143
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:133315"
     Site            146..149
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133315"
     Site            176..178
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133315"
     Site            195..199
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:133315"
     CDS             1..228
                     /gene="RAB33B"
                     /coded_by="XM_041469458.1:41..727"
                     /db_xref="GeneID:121354683"
ORIGIN      
        1 maagelessl elsltgsgal hgalpparsr ifkiivigds nvgktcltyr fcagrfpqrt
       61 eatigvdfre ravtidgeri kiqlwdtagq erfrksmvqh yyrnvhavvf vydmtniasf
      121 hslpswieec kqhllandip rilvgnkcdl rsdiqvptdl aqkfadthsm plfetsaknp
      181 ndndhveaif mtlahklksh kplmlsqppd hdeihikpep kpitscwc
//
LOCUS       XP_041325393             430 aa            linear   VRT 06-MAY-2021
DEFINITION  nocturnin [Pyrgilauda ruficollis].
ACCESSION   XP_041325393
VERSION     XP_041325393.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469459.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..430
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..430
                     /product="nocturnin"
                     /calculated_mol_wt=47830
     Region          143..422
                     /region_name="Deadenylase_nocturnin"
                     /note="C-terminal deadenylase domain of nocturnin and
                     related domains; cd09096"
                     /db_xref="CDD:197330"
     Site            order(148,194,285,288,290,296,323,325,327,366,371,
                     375..376,413)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197330"
     Site            order(148,194,285,288,290,296,323,325,327,366,371,375,413)
                     /site_type="other"
                     /note="putative poly(A) RNA binding site [nucleotide
                     binding]"
                     /db_xref="CDD:197330"
     Site            order(148,194,285,323,325,376,412..413)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197330"
     Site            order(148,194,412)
                     /site_type="other"
                     /note="putative Mg binding site A [ion binding]"
                     /db_xref="CDD:197330"
     Site            order(285,325,413)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197330"
     Site            order(323,325,413)
                     /site_type="other"
                     /note="putative Mg binding site B [ion binding]"
                     /db_xref="CDD:197330"
     CDS             1..430
                     /gene="NOCT"
                     /coded_by="XM_041469459.1:284..1576"
                     /db_xref="GeneID:121354684"
ORIGIN      
        1 myqssarclc salpaalcca paaasvsrlp lprpcshppp pgpaapqaaa ggppapgtpp
       61 rtvcsmgnst srlysilakt lssgavsqhq ncleqldsaq ldpidpkdll eecqivlqkr
      121 pprfqrnfvn lkknttsnhr pirvmqwnil aqalgegkdn fvqcpmealk weerkclile
      181 eilaykpdil clqevdhyfd tfepllsrlg yqctffpkpw spcldvehnn gpdgcamffl
      241 kerfelvssa nirltamklk tnqvaiaqtl kchetgrlfc iavthlkart gwerfrsaqg
      301 cdllqnlkni tqgakipliv cgdfnaepte evyrefsnss lnlnsaykll spdgqseppy
      361 ttwkirpsge crhtldyiwy sqhalnvnsa lgllteeqig pnrlpsfnyp sdhlslvcdf
      421 sfnqdpdrll
//
LOCUS       XP_041325394             222 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354685 [Pyrgilauda ruficollis].
ACCESSION   XP_041325394
VERSION     XP_041325394.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469460.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..222
                     /product="uncharacterized protein LOC121354685"
                     /calculated_mol_wt=24252
     Region          16..153
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     CDS             1..222
                     /gene="LOC121354685"
                     /coded_by="XM_041469460.1:42..710"
                     /db_xref="GeneID:121354685"
ORIGIN      
        1 mdqyryfifn qrnivvlgmf qiafstvcvt sgfidgifrt esqlgktrap vwagmvmgvp
       61 gvlalfssqr knpvlvnvli vcsiiscvai fivivysslt lnygeeeels sapvhvihtr
      121 filnevvkga niamlavsic safcvlamay lgcrslpccs cydsvtgmew lqpsedqnqs
      181 vemicavesp ggrifnftdg fpaqdvdaee dtskpppfir mt
//
LOCUS       XP_041325395             865 aa            linear   VRT 06-MAY-2021
DEFINITION  N-alpha-acetyltransferase 15, NatA auxiliary subunit isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325395
VERSION     XP_041325395.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469461.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..865
                     /product="N-alpha-acetyltransferase 15, NatA auxiliary
                     subunit isoform X1"
                     /calculated_mol_wt=100924
     Region          12..38
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          44..283
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          47..74
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          82..108
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(84..85,88..89,91,115,118..119,122..123,125..126,149,
                     152..153,156..157,160)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          113..143
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          148..173
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          187..698
                     /region_name="NatA_aux_su"
                     /note="N-terminal acetyltransferase A, auxiliary subunit;
                     pfam12569"
                     /db_xref="CDD:463630"
     Site            order(378..379,382..383,385,409,412..413,416..417,
                     419..420,443,446..447,450..451,454)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          378..402
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          407..437
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          442..467
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..865
                     /gene="NAA15"
                     /coded_by="XM_041469461.1:256..2853"
                     /db_xref="GeneID:121354686"
ORIGIN      
        1 mpsvslppke nalfkrilrc yehkqyrngl kfckqilsnp kfaehgetla mkgltlnclg
       61 kkeeayelvr rglrndlksh vcwhvygllq rsdkkydeai kcyrnalkwd kdnlqilrdl
      121 sllqiqmrdl egyretryql lqlrpaqras wigyaiayhl ledyemaaki leefrktqqt
      181 spdkvdyeys elllyqnqvl reaglykeal ehlctyekqi cdklaveetk gdlllqlgrl
      241 eeavevykgl qernpenway ykglekalkp anmmerlkiy eeawtkyprg lvprrlplnf
      301 lsgekfkecl dkflrmnfsk gcppvfntlr slykdkekva iieelvigye tslrscrlfn
      361 pnddgkeepp ttllwvqyyl aqhydkiglp slaleyinaa iestptliel flvkakiykh
      421 agnikeaarw mdeaqaldta drfinskcak ymlkansike aeemcskftr egtsavenln
      481 emqcmwfqte caqaykamnk fgealkkche ierhfveitd dqfdfhtycm rkitlrsyvd
      541 llkledvlrq hpfyfkaari aieiylklhd npltdenkeh eadtanmsdk elkklrnkqr
      601 raqkkaqvee ekknaekekq qrnqkkkkdd ddeeiggpke elipeklakv eapleeaikf
      661 ltplknlvkn kiethlfafe iyfrkekfll mlqsvkrafa idsshpwlhe cmihlfssvs
      721 eskdlpdavr tvlnqemnrl fgatnpknfn eaflkrnyds lphrlsaakm myyldpssqk
      781 ravelamtld eslinrnlqt cmevlealcd gslgdckeas etyranchkl fpyalafmpp
      841 gyeedmkitv ngdssaepee lanei
//
LOCUS       XP_041325396             822 aa            linear   VRT 06-MAY-2021
DEFINITION  N-alpha-acetyltransferase 15, NatA auxiliary subunit isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325396
VERSION     XP_041325396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469462.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..822
                     /product="N-alpha-acetyltransferase 15, NatA auxiliary
                     subunit isoform X2"
                     /calculated_mol_wt=95943
     Region          12..38
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          44..283
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          47..74
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          82..108
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(84..85,88..89,91,115,118..119,122..123,125..126,149,
                     152..153,156..157,160)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          113..143
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          148..173
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          187..655
                     /region_name="NatA_aux_su"
                     /note="N-terminal acetyltransferase A, auxiliary subunit;
                     pfam12569"
                     /db_xref="CDD:463630"
     Site            order(378..379,382..383,385,409,412..413,416..417,
                     419..420,443,446..447,450..451,454)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          378..402
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          407..437
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          442..467
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..822
                     /gene="NAA15"
                     /coded_by="XM_041469462.1:257..2725"
                     /db_xref="GeneID:121354686"
ORIGIN      
        1 mpsvslppke nalfkrilrc yehkqyrngl kfckqilsnp kfaehgetla mkgltlnclg
       61 kkeeayelvr rglrndlksh vcwhvygllq rsdkkydeai kcyrnalkwd kdnlqilrdl
      121 sllqiqmrdl egyretryql lqlrpaqras wigyaiayhl ledyemaaki leefrktqqt
      181 spdkvdyeys elllyqnqvl reaglykeal ehlctyekqi cdklaveetk gdlllqlgrl
      241 eeavevykgl qernpenway ykglekalkp anmmerlkiy eeawtkyprg lvprrlplnf
      301 lsgekfkecl dkflrmnfsk gcppvfntlr slykdkekva iieelvigye tslrscrlfn
      361 pnddgkeepp ttllwvqyyl aqhydkiglp slaleyinaa iestptliel flvkakiykh
      421 agnikeaarw mdeaqaldta drfinskcak ymlkansike aeemcskftr hfveitddqf
      481 dfhtycmrki tlrsyvdllk ledvlrqhpf yfkaariaie iylklhdnpl tdenkehead
      541 tanmsdkelk klrnkqrraq kkaqveeekk naekekqqrn qkkkkdddde eiggpkeeli
      601 peklakveap leeaikfltp lknlvknkie thlfafeiyf rkekfllmlq svkrafaids
      661 shpwlhecmi hlfssvsesk dlpdavrtvl nqemnrlfga tnpknfneaf lkrnydslph
      721 rlsaakmmyy ldpssqkrav elamtldesl inrnlqtcme vlealcdgsl gdckeasety
      781 ranchklfpy alafmppgye edmkitvngd ssaepeelan ei
//
LOCUS       XP_041325397             326 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354687 [Pyrgilauda ruficollis].
ACCESSION   XP_041325397
VERSION     XP_041325397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469463.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="uncharacterized protein LOC121354687"
                     /calculated_mol_wt=35137
     Region          122..290
                     /region_name="AIF-MLS"
                     /note="Mitochondria localization Sequence; pfam14962"
                     /db_xref="CDD:464407"
     CDS             1..326
                     /gene="LOC121354687"
                     /coded_by="XM_041469463.1:986..1966"
                     /db_xref="GeneID:121354687"
ORIGIN      
        1 mffllgkchp yypgsvvavs terpllanga gryrqrpalr nvrsapesrf plplplgllr
       61 rrsrdtpgre rrpgtrggvg lrldppprrp rrerclrphp rhdgqlrvgf vllrsaarcl
      121 amslcrtasq alasllsrvp saasrlkqra pprqmssgsv pgssrdsmmi yllagvavgg
      181 lfyayrvvss prskfvehkn ilheraegqk snpwsrkegd geevdevtga ektmeeadaa
      241 asvepaaqde ragptaqdet sgvspeagge ndllapevsh aveeaqqeap anseaaanle
      301 laanseaaav qvseeektte evgkep
//
LOCUS       XP_041325398              84 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325398
VERSION     XP_041325398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024522984.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="NADH dehydrogenase [ubiquinone] 1 subunit C1,
                     mitochondrial"
                     /calculated_mol_wt=9107
     Region          29..73
                     /region_name="NADH_dh_m_C1"
                     /note="NADH dehydrogenase [ubiquinone] 1 subunit C1,
                     mitochondrial; pfam15088"
                     /db_xref="CDD:434447"
     CDS             1..84
                     /gene="NDUFC1"
                     /coded_by="XM_041469464.1:179..433"
                     /db_xref="GeneID:121354689"
ORIGIN      
        1 maaglralrr wgsvvaaapp slaftrsafv vkkvnnaqpn wlgvglafgt saalwavlvk
       61 qhnedvmeye rrkqarghkc recs
//
LOCUS       XP_041325399             402 aa            linear   VRT 06-MAY-2021
DEFINITION  probable inactive tRNA-specific adenosine deaminase-like protein 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325399
VERSION     XP_041325399.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469465.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523007.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..402
                     /product="probable inactive tRNA-specific adenosine
                     deaminase-like protein 3"
                     /calculated_mol_wt=39739
     Region          <86..>271
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <318..385
                     /region_name="TadA"
                     /note="tRNA(Arg) A34 adenosine deaminase TadA
                     [Translation, ribosomal structure and biogenesis];
                     COG0590"
                     /db_xref="CDD:440355"
     CDS             1..402
                     /gene="ADAT3"
                     /coded_by="XM_041469465.1:67..1275"
                     /db_xref="GeneID:121354690"
ORIGIN      
        1 mgttwsghrg redigdrdsd vtgtarrghg gvvtghdgvv tgrarrrghp gdsghgggdg
       61 gsgakvarvg ggdviagrgd vtvgdtdpta tsrsgdipga aegpgatpgd gsdvitnagi
      121 gdvtadsdat rdvpvglagh vtpgatkdpd atsgdsddvt tatipvdptg hvtpgvtkdp
      181 datsgdsddv ttasipvdlt ghvtpgvtkd pdaasgatpg dtddvttadv ppdflslgdv
      241 pmdltghvtp gvtkdpdaas gatpgdtddv tihdvpldfl slgdvpmdlt ghvipgaaes
      301 pgaaaddvtg dvtgdvtggy llsgcdvfvt repcalcama llhararrvf ygepsargal
      361 gtryglhghp rlnhryrvwl lpvtgdtgst gnngnsgnng ng
//
LOCUS       XP_041325401             720 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325401
VERSION     XP_041325401.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469467.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..720
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X1"
                     /calculated_mol_wt=79684
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..720
                     /gene="LOC121354691"
                     /coded_by="XM_041469467.1:136..2298"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeeksr dtteriqrvl dspgtffdlk sdgssspssp
      601 efpsrkskml rsqtsgycvm qplsrssssv ssccsglren gtseeedndr eltcslkgpp
      661 kqdsmvqsmw lddsdctpst ssspgsrllp sssvagstgk gkgskaeaqh hnpasilccv
//
LOCUS       XP_041325402             720 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325402
VERSION     XP_041325402.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469468.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..720
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X1"
                     /calculated_mol_wt=79684
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..720
                     /gene="LOC121354691"
                     /coded_by="XM_041469468.1:136..2298"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeeksr dtteriqrvl dspgtffdlk sdgssspssp
      601 efpsrkskml rsqtsgycvm qplsrssssv ssccsglren gtseeedndr eltcslkgpp
      661 kqdsmvqsmw lddsdctpst ssspgsrllp sssvagstgk gkgskaeaqh hnpasilccv
//
LOCUS       XP_041325403             720 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325403
VERSION     XP_041325403.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469469.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..720
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X1"
                     /calculated_mol_wt=79684
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..720
                     /gene="LOC121354691"
                     /coded_by="XM_041469469.1:136..2298"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeeksr dtteriqrvl dspgtffdlk sdgssspssp
      601 efpsrkskml rsqtsgycvm qplsrssssv ssccsglren gtseeedndr eltcslkgpp
      661 kqdsmvqsmw lddsdctpst ssspgsrllp sssvagstgk gkgskaeaqh hnpasilccv
//
LOCUS       XP_041325404             719 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325404
VERSION     XP_041325404.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469470.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..719
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X2"
                     /calculated_mol_wt=79597
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..719
                     /gene="LOC121354691"
                     /coded_by="XM_041469470.1:136..2295"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeekrd tteriqrvld spgtffdlks dgssspsspe
      601 fpsrkskmlr sqtsgycvmq plsrssssvs sccsglreng tseeedndre ltcslkgppk
      661 qdsmvqsmwl ddsdctpsts sspgsrllps ssvagstgkg kgskaeaqhh npasilccv
//
LOCUS       XP_041325405             671 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325405
VERSION     XP_041325405.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469471.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..671
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X3"
                     /calculated_mol_wt=74626
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..671
                     /gene="LOC121354691"
                     /coded_by="XM_041469471.1:136..2151"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfksfalp grspsrtras rfhgrrssai gieniqeeks rdtteriqrv ldspgtffdl
      541 ksdgssspss pefpsrkskm lrsqtsgycv mqplsrssss vssccsglre ngtseeednd
      601 reltcslkgp pkqdsmvqsm wlddsdctps tssspgsrll psssvagstg kgkgskaeaq
      661 hhnpasilcc v
//
LOCUS       XP_041325406             670 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325406
VERSION     XP_041325406.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469472.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..670
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X4"
                     /calculated_mol_wt=74539
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..670
                     /gene="LOC121354691"
                     /coded_by="XM_041469472.1:136..2148"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfksfalp grspsrtras rfhgrrssai gieniqeekr dtteriqrvl dspgtffdlk
      541 sdgssspssp efpsrkskml rsqtsgycvm qplsrssssv ssccsglren gtseeedndr
      601 eltcslkgpp kqdsmvqsmw lddsdctpst ssspgsrllp sssvagstgk gkgskaeaqh
      661 hnpasilccv
//
LOCUS       XP_041325407             610 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325407
VERSION     XP_041325407.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469473.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..610
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X5"
                     /calculated_mol_wt=68219
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..610
                     /gene="LOC121354691"
                     /coded_by="XM_041469473.1:136..1968"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeeksr dtteriqrvl dspgtffdlk sdgssspssp
      601 efpsrkskhi
//
LOCUS       XP_041325408             609 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325408
VERSION     XP_041325408.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469474.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X6"
                     /calculated_mol_wt=68132
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..609
                     /gene="LOC121354691"
                     /coded_by="XM_041469474.1:136..1965"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeekrd tteriqrvld spgtffdlks dgssspsspe
      601 fpsrkskhi
//
LOCUS       XP_041325409             609 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325409
VERSION     XP_041325409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X7"
                     /calculated_mol_wt=68055
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..609
                     /gene="LOC121354691"
                     /coded_by="XM_041469475.1:136..1965"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeeksr dtteriqrvl dspgtffdlk sdgssspssp
      601 efpsrksks
//
LOCUS       XP_041325410             608 aa            linear   VRT 06-MAY-2021
DEFINITION  rap1 GTPase-activating protein 1-like isoform X8 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325410
VERSION     XP_041325410.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469476.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="rap1 GTPase-activating protein 1-like isoform
                     X8"
                     /calculated_mol_wt=67968
     Region          49..69
                     /region_name="GoLoco"
                     /note="GoLoco motif; pfam02188"
                     /db_xref="CDD:460481"
     Region          265..444
                     /region_name="Rap_GAP"
                     /note="Rap/ran-GAP; pfam02145"
                     /db_xref="CDD:460463"
     CDS             1..608
                     /gene="LOC121354691"
                     /coded_by="XM_041469476.1:136..1962"
                     /db_xref="GeneID:121354691"
ORIGIN      
        1 mfsqehgfpa gasggrseea vqgfsdvids ptegfpcvlt pavpnktadl femiekmqgs
       61 rldeqrcslp aplkteeeyi pypsihevlq kgwpypliil pqfggywieg tshnlsslsp
      121 tlsdvpfsws gkvklesdpt aklyrkhflg kehqnfyssd mslgylvlsv kyeqiekqen
      181 lrlllrtrtg tkhdlipisc lnefpnavqm akllcedvnv erffpvlypk asqlivafde
      241 hvisnnfkfg viyqkpgqtt eeevfsntve sqgflefldf lgdkiqlqdf rgfrggldvt
      301 rgqtgtesvy tnfrgkeimf hvstklpfte gdsqqlqrkr higndivaii fqdestpfvp
      361 dmiasnflha yvvvqlthst tgdtlykvsv tarddvpffg pplpnpaifk ksaefrefll
      421 vklinaeysc yraekfakle ertrsalles lfeelqlrsr smmglpvged dkiengsggf
      481 lenfkrvirg rsqsldtmgi smrkqqpatl psrpatagla lsqsvaegpk aiaasfalpg
      541 rspsrtrasr fhgrrssaig ieniqeeksr dtteriqrvl dspgtffdlk sdgssspssp
      601 efpsrksk
//
LOCUS       XP_041325411             221 aa            linear   VRT 06-MAY-2021
DEFINITION  glutathione S-transferase kappa 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325411
VERSION     XP_041325411.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469477.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="glutathione S-transferase kappa 1"
                     /calculated_mol_wt=25076
     Region          6..209
                     /region_name="DsbA_GSTK"
                     /note="DsbA family, Glutathione (GSH) S-transferase Kappa
                     (GSTK) subfamily; GSTK is a member of the GST family of
                     enzymes which catalyzes the transfer of the thiol of GSH
                     to electrophilic substrates. It is specifically located in
                     the mitochondria and...; cd03021"
                     /db_xref="CDD:239319"
     Site            order(14..16,51,60,179..181,196,198..200)
                     /site_type="other"
                     /note="GSH binding site [chemical binding]"
                     /db_xref="CDD:239319"
     Site            14
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239319"
     Site            order(49,51..52,57,59,63,67,174,177,194,196,199..200,206)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239319"
     CDS             1..221
                     /gene="GSTK1"
                     /coded_by="XM_041469477.1:96..761"
                     /db_xref="GeneID:121354693"
ORIGIN      
        1 mgrtlvelfy dvispyswla fealcryrhi wnidlrfrpa flggimqqtg nkppamlpkr
       61 geyllkdmkr makyyqvpvr mspdafqhim gtssltamrf itaidmtnpq yleplsrefw
      121 mrfwsqhedi sqpenilava rqaglsaels qkalemissp tvkdrlkdtt tealkygafg
      181 mpavvahygg ephlffgsdr lellgsvige kwlgpvpspk l
//
LOCUS       XP_041325412             962 aa            linear   VRT 06-MAY-2021
DEFINITION  ephrin type-A receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325412
VERSION     XP_041325412.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469478.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..962
                     /product="ephrin type-A receptor 1"
                     /calculated_mol_wt=107819
     Region          22..196
                     /region_name="EphR_LBD"
                     /note="Ligand Binding Domain of Ephrin Receptors; cl02704"
                     /db_xref="CDD:470656"
     Site            order(34,47..50,52..53,57,59,62,97,99,147,155..157,
                     184..186,188)
                     /site_type="other"
                     /note="ephrin binding site [polypeptide binding]"
                     /db_xref="CDD:198439"
     Region          322..414
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(322,395,411)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          432..522
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(432,495,510)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(511..512,514..515)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Site            order(531,533..534,537..538,540..542,545..546,549..550,
                     553)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:214014"
     Region          535..606
                     /region_name="EphA2_TM"
                     /note="Ephrin type-A receptor 2 transmembrane domain;
                     pfam14575"
                     /db_xref="CDD:464211"
     Region          604..870
                     /region_name="PTKc_EphR"
                     /note="Catalytic domain of Ephrin Receptor Protein
                     Tyrosine Kinases; cd05033"
                     /db_xref="CDD:270629"
     Site            order(615,617..619,623,639,641,687..688,690,734,738..739,
                     741,752,771..775,784,818)
                     /site_type="active"
                     /db_xref="CDD:270629"
     Site            order(615,618..619,639,641,687..688,690,739,741,752)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270629"
     Site            order(734,738,771..775,784,818)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270629"
     Site            order(751..759,763..777)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270629"
     Region          898..960
                     /region_name="SAM_EPH-A1"
                     /note="SAM domain of EPH-A1 subfamily of tyrosine kinase
                     receptors; cd09542"
                     /db_xref="CDD:188941"
     Site            order(916,949)
                     /site_type="other"
                     /note="putative phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:188941"
     CDS             1..962
                     /gene="EPHA1"
                     /coded_by="XM_041469478.1:1..2889"
                     /db_xref="GeneID:121354694"
ORIGIN      
        1 melslgllll wallpaeahg kevdlldtst aqgelgwlpd ppevgwsevq qmingtpiym
       61 yqdcsvlseg dtdhwlrtnw iyrgeaasrv yvelkftvrd cksfkgevvt cketfnlyym
      121 eseqdvgiqf rrplftklnt vaadrsftsr diesgamqln tevcpigkls rrgfylafqn
      181 sgacvamvsv rvyyktcpea vrglarfpet lagsegltev pgvcveyaae evgspprmhc
      241 stdgewlvpv grclcavgfe evdgscvacq rgfyrhslda krclkcppns lsnesgatsc
      301 pcnagfyrap segqniactr ppsaprnvsf sllgtqlslw wqppsdhggr kdltytvfcq
      361 rcqflscepc eagvvfspsa sgltkpavdv dgleaytnyt ftveahngvs gmgpapqrta
      421 pavwvsvgha apvtvsqfil tqrddsslsv swlaprqrsr tsveyevmff ekgeearytv
      481 khllepnvtl rdlqpdtayl lrvrsitplg pgpyspeqef rtlppdtgal sggvivsiif
      541 gvllfigliv gffmfrrkra rrrharsdyn tsgferekvw lkpyvdlqpy ddpsrgvlef
      601 tkeldvscvt menvigegef gevyrgslrl pgkerivvai ktlkstysds qwwnflreat
      661 imgqfnhpni vrlegvvtkr rpmmiiteym engaldtflr eneekfspvq lvsmlqgias
      721 gmtylsehny vhrdlaarni lvtrslqckv sdfglsrile ndaegtyetk ggkipirwta
      781 peaiahrift sasdvwsfgi vmwevlsfgd kpyghmtnqe vmksledgyr lpppvdcpsi
      841 lyelmkscws hdrmrrphfq eiraqlqhfi sspqllrpva dfdprvtlrl pscsgsdgip
      901 yrsipewles irmkryisnf rtagldtmes ileltaedlk qmgvslpghq krilcsiqgf
      961 ke
//
LOCUS       XP_041325413             388 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 10AC1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325413
VERSION     XP_041325413.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469479.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="olfactory receptor 10AC1-like"
                     /calculated_mol_wt=41904
     Region          39..308
                     /region_name="7tmA_OR10A-like"
                     /note="olfactory receptor subfamily 10A and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15225"
                     /db_xref="CDD:320353"
     Region          39..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320353"
     Region          66..92
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320353"
     Site            order(88,91..92,104..109,111..112,115,160,162..166,202,
                     205..207,209..211,213..214,259,262..263,265..266,269,
                     275..276,278..280,283,286..287)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320353"
     Region          104..134
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320353"
     Region          147..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320353"
     Region          202..232
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320353"
     Region          239..269
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320353"
     Region          276..301
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320353"
     CDS             1..388
                     /gene="LOC121354695"
                     /coded_by="XM_041469479.1:121..1287"
                     /db_xref="GeneID:121354695"
ORIGIN      
        1 mpcegcmewd nvstgattef lllgfsellh lrvllfltfl tvhlvtlagn mmifmavvme
       61 psrppmlffl gqlsavelcy tlviapkall glaaggsais algcaaqmql fvalggaecf
      121 llaamsydry vavcqplrya almgeglclr lalacalggf avalgltvav frlpfcqprr
      181 iehffcdvpa vlrlacaqgy aaqlpalaac vlllllpfll ilasylciav allgvaspag
      241 rgkafstcis hlavtllhyg catfiyirpt ssyspardkv vslvytnitp lmypliyslr
      301 nkeirgilrk mlrrkkigsn qeqrtktnqe tkvelkievk llpaglcnvr aalgslrerp
      361 mrcpqqpghg grsrrglrag pplrparg
//
LOCUS       XP_041325415             622 aa            linear   VRT 06-MAY-2021
DEFINITION  zyxin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325415
VERSION     XP_041325415.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469481.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..622
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..622
                     /product="zyxin isoform X1"
                     /calculated_mol_wt=66896
     Region          <212..402
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          399..485
                     /region_name="LIM1_Zyxin"
                     /note="The first LIM domain of Zyxin; cd09349"
                     /db_xref="CDD:188735"
     Site            order(432,435,454,457,460,463,481,484)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188735"
     Region          492..551
                     /region_name="LIM2_Zyxin"
                     /note="The second LIM domain of Zyxin; cd09353"
                     /db_xref="CDD:188739"
     Site            order(492,495,512,515,518,521,540,543)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188739"
     Region          552..618
                     /region_name="LIM3_Zyxin"
                     /note="The third LIM domain of Zyxin; cd09435"
                     /db_xref="CDD:188819"
     Site            order(552,555,579,582,585,588,610,613)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188819"
     CDS             1..622
                     /gene="ZYX"
                     /coded_by="XM_041469481.1:209..2077"
                     /db_xref="GeneID:121354697"
ORIGIN      
        1 mvkqlclgea ffasweeapg lggssasrcc gsrragrgsr agrprqlrcr ggtsrfprga
       61 ekmaspgapg trmtstvsin istpsfynpq kkfapvvapk pkvnpfkagg asesslpppp
      121 gpgaqraqig kvgeiplppv sllaedlplp pppppgedas fssncafppp pppfeepfpp
      181 apdeafpspp sppppppppm fdegpvskvp apqitpgftg slekplapka pveipsapkd
      241 tphsfpskft pkqsgsssfk ppgvdlnptp tpwaapqqrk epqapvpppp slpsaqptpk
      301 ftpspvagsp ksvsksgdnv pmapsnstry ptslqtqfta pspsgpssrp qppnftyaqq
      361 rerpqvqekp rpteqpaaar dthrptgssa dpprgnsclt mkeveelekl tqklmkdmeh
      421 pppaeaatse lcgfcrkpls rtqpavrald rlfhvecftc fkcekqlqgq qfynvdekpf
      481 cedcyastle kcsvckqtit drmlkatgns yhpqcftcvm chtplegtsf ivdqsnqphc
      541 vddyhrkyap rcsvcsepim pepgkdetvr vvaleknfhm kcykcedcgk plsieadeng
      601 cfpldghvlc ikchtvrakt ar
//
LOCUS       XP_041325416             569 aa            linear   VRT 06-MAY-2021
DEFINITION  zyxin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325416
VERSION     XP_041325416.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469482.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="zyxin isoform X2"
                     /calculated_mol_wt=61155
     Region          <159..349
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          346..432
                     /region_name="LIM1_Zyxin"
                     /note="The first LIM domain of Zyxin; cd09349"
                     /db_xref="CDD:188735"
     Site            order(379,382,401,404,407,410,428,431)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188735"
     Region          439..498
                     /region_name="LIM2_Zyxin"
                     /note="The second LIM domain of Zyxin; cd09353"
                     /db_xref="CDD:188739"
     Site            order(439,442,459,462,465,468,487,490)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188739"
     Region          499..565
                     /region_name="LIM3_Zyxin"
                     /note="The third LIM domain of Zyxin; cd09435"
                     /db_xref="CDD:188819"
     Site            order(499,502,526,529,532,535,557,560)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188819"
     CDS             1..569
                     /gene="ZYX"
                     /coded_by="XM_041469482.1:136..1845"
                     /db_xref="GeneID:121354697"
ORIGIN      
        1 megpggaekm aspgapgtrm tstvsinist psfynpqkkf apvvapkpkv npfkaggase
       61 sslppppgpg aqraqigkvg eiplppvsll aedlplpppp ppgedasfss ncafpppppp
      121 feepfppapd eafpsppspp ppppppmfde gpvskvpapq itpgftgsle kplapkapve
      181 ipsapkdtph sfpskftpkq sgsssfkppg vdlnptptpw aapqqrkepq apvppppslp
      241 saqptpkftp spvagspksv sksgdnvpma psnstrypts lqtqftapsp sgpssrpqpp
      301 nftyaqqrer pqvqekprpt eqpaaardth rptgssadpp rgnscltmke veelekltqk
      361 lmkdmehppp aeaatselcg fcrkplsrtq pavraldrlf hvecftcfkc ekqlqgqqfy
      421 nvdekpfced cyastlekcs vckqtitdrm lkatgnsyhp qcftcvmcht plegtsfivd
      481 qsnqphcvdd yhrkyaprcs vcsepimpep gkdetvrvva leknfhmkcy kcedcgkpls
      541 ieadengcfp ldghvlcikc htvraktar
//
LOCUS       XP_041325417             560 aa            linear   VRT 06-MAY-2021
DEFINITION  zyxin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325417
VERSION     XP_041325417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..560
                     /product="zyxin isoform X3"
                     /calculated_mol_wt=60298
     Region          <150..340
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          337..423
                     /region_name="LIM1_Zyxin"
                     /note="The first LIM domain of Zyxin; cd09349"
                     /db_xref="CDD:188735"
     Site            order(370,373,392,395,398,401,419,422)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188735"
     Region          430..489
                     /region_name="LIM2_Zyxin"
                     /note="The second LIM domain of Zyxin; cd09353"
                     /db_xref="CDD:188739"
     Site            order(430,433,450,453,456,459,478,481)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188739"
     Region          490..556
                     /region_name="LIM3_Zyxin"
                     /note="The third LIM domain of Zyxin; cd09435"
                     /db_xref="CDD:188819"
     Site            order(490,493,517,520,523,526,548,551)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:188819"
     CDS             1..560
                     /gene="ZYX"
                     /coded_by="XM_041469483.1:143..1825"
                     /db_xref="GeneID:121354697"
ORIGIN      
        1 maspgapgtr mtstvsinis tpsfynpqkk fapvvapkpk vnpfkaggas esslppppgp
       61 gaqraqigkv geiplppvsl laedlplppp pppgedasfs sncafppppp pfeepfppap
      121 deafpsppsp pppppppmfd egpvskvpap qitpgftgsl ekplapkapv eipsapkdtp
      181 hsfpskftpk qsgsssfkpp gvdlnptptp waapqqrkep qapvppppsl psaqptpkft
      241 pspvagspks vsksgdnvpm apsnstrypt slqtqftaps psgpssrpqp pnftyaqqre
      301 rpqvqekprp teqpaaardt hrptgssadp prgnscltmk eveelekltq klmkdmehpp
      361 paeaatselc gfcrkplsrt qpavraldrl fhvecftcfk cekqlqgqqf ynvdekpfce
      421 dcyastlekc svckqtitdr mlkatgnsyh pqcftcvmch tplegtsfiv dqsnqphcvd
      481 dyhrkyaprc svcsepimpe pgkdetvrvv aleknfhmkc ykcedcgkpl sieadengcf
      541 pldghvlcik chtvraktar
//
LOCUS       XP_041325418             384 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM131B isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325418
VERSION     XP_041325418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469484.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..384
                     /product="protein FAM131B isoform X1"
                     /calculated_mol_wt=42322
     Region          67..377
                     /region_name="FAM131"
                     /note="Putative cell signalling; pfam15010"
                     /db_xref="CDD:464442"
     CDS             1..384
                     /gene="FAM131B"
                     /coded_by="XM_041469484.1:221..1375"
                     /db_xref="GeneID:121354698"
ORIGIN      
        1 mgcigsrtvg neviavdwkg lkdvdqinmd stsslhgssf hrpsteqtrt dfswdginls
       61 medttsilpk lkrnsnaygi galakssfsg isrsmkdhvt kptamgqgrv ahmiewqgwg
      121 kahsqqqqht hetarkdada ysdlsdgeke arflagvmeq faiseatlma wssmdgedvs
      181 vnsnqdnpag nysenyqelm esqehmaqtq ydswphsyvs qgmyclgssd aweasdqsli
      241 aspatgsylg qnfdesqtnl qesillqssf lqqqqlqqqr qeqnfiqstg lvhvwplqta
      301 qggggaesst ymedhiedeg nprlekapll nkkpspeedd avcrdlesls preemehaal
      361 srkvsdvtss gvqsfdeeeg etnn
//
LOCUS       XP_041325419             290 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM131B isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325419
VERSION     XP_041325419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..290
                     /product="protein FAM131B isoform X2"
                     /calculated_mol_wt=32172
     Region          1..283
                     /region_name="FAM131"
                     /note="Putative cell signalling; pfam15010"
                     /db_xref="CDD:464442"
     CDS             1..290
                     /gene="FAM131B"
                     /coded_by="XM_041469485.1:92..964"
                     /db_xref="GeneID:121354698"
ORIGIN      
        1 mkdhvtkpta mgqgrvahmi ewqgwgkahs qqqqhtheta rkdadaysdl sdgekearfl
       61 agvmeqfais eatlmawssm dgedvsvnsn qdnpagnyse nyqelmesqe hmaqtqydsw
      121 phsyvsqgmy clgssdawea sdqsliaspa tgsylgqnfd esqtnlqesi llqssflqqq
      181 qlqqqrqeqn fiqstglvhv wplqtaqggg gaesstymed hiedegnprl ekapllnkkp
      241 speeddavcr dleslspree mehaalsrkv sdvtssgvqs fdeeegetnn
//
LOCUS       XP_041325420             426 aa            linear   VRT 06-MAY-2021
DEFINITION  caspase-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325420
VERSION     XP_041325420.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469486.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..426
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..426
                     /product="caspase-2"
                     /calculated_mol_wt=48193
     Region          7..93
                     /region_name="CARD_CASP2"
                     /note="Caspase activation and recruitment domain of
                     Caspase-2; cd08332"
                     /db_xref="CDD:260040"
     Region          164..419
                     /region_name="CASc"
                     /note="Caspase, interleukin-1 beta converting enzyme (ICE)
                     homologues; Cysteine-dependent aspartate-directed
                     proteases that mediate programmed cell death (apoptosis).
                     Caspases are synthesized as inactive zymogens and
                     activated by proteolysis of the peptide...; cd00032"
                     /db_xref="CDD:237997"
     Site            order(192,251,291,298,348..353,357..358)
                     /site_type="other"
                     /note="substrate pocket [chemical binding]"
                     /db_xref="CDD:237997"
     Site            order(250,293)
                     /site_type="active"
                     /db_xref="CDD:237997"
     Site            order(299,333..334,341,344,347,370,378,384,403,408..409,
                     411,414..415)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:237997"
     Site            order(300,332)
                     /site_type="active"
                     /note="proteolytic cleavage site [active]"
                     /db_xref="CDD:237997"
     CDS             1..426
                     /gene="CASP2"
                     /coded_by="XM_041469486.1:143..1423"
                     /db_xref="GeneID:121354699"
ORIGIN      
        1 mlaacgmqrc hqealkknrv mlakqlvlnv lvehmvekdi itaemvemiq aksgsfdrnv
       61 eflnllpkrg pnafsafcea lretqqqhle amilktmssl sheiarlehc hesdlpypas
      121 escnskrprw lepmehsldn gdgpsippvk yctpefyhnh qhlaykltse prglalilsn
      181 vrfssekdle yrsggdvdca slemlfrhlg yqvtvfhdqt aqemqnaler fsklrdhrdv
      241 dsciiallsh gveggvygsd gkllqlqeaf rlfdnancpn lqnkpkmffi qacrgdeldr
      301 gvdqrdgkgw sdspgceqsd ankeeslklr lptcsdmicg yaclkgtaam rntkrgswyv
      361 ealtsvfaed srhthvadml vkvnrqikqr egyapgtefh rckemseycs tlcrdlylfp
      421 gylpgk
//
LOCUS       XP_041325421             240 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 139 [Pyrgilauda ruficollis].
ACCESSION   XP_041325421
VERSION     XP_041325421.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469487.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..240
                     /product="transmembrane protein 139"
                     /calculated_mol_wt=26205
     CDS             1..240
                     /gene="TMEM139"
                     /coded_by="XM_041469487.1:413..1135"
                     /db_xref="GeneID:121354700"
ORIGIN      
        1 mlletrwkni rqtllllfta alligvtmla issninpvgy fflgvggvcl vgyllsvfve
       61 cylrnqhrrd aneippnrqs qagvnaayea ptyeevmtms apapaiwtit snpgsvpspl
      121 sepppynvvi essaqqemmv ealrgpvppd tvhtsetdtg srtqlqlvlp prlqrfvsdi
      181 hedkdveerf eplepltppp ayetaisdev fanthqpsvl glispsmnte pnphpntgcs
//
LOCUS       XP_041325422             240 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 139 [Pyrgilauda ruficollis].
ACCESSION   XP_041325422
VERSION     XP_041325422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..240
                     /product="transmembrane protein 139"
                     /calculated_mol_wt=26205
     CDS             1..240
                     /gene="TMEM139"
                     /coded_by="XM_041469488.1:245..967"
                     /db_xref="GeneID:121354700"
ORIGIN      
        1 mlletrwkni rqtllllfta alligvtmla issninpvgy fflgvggvcl vgyllsvfve
       61 cylrnqhrrd aneippnrqs qagvnaayea ptyeevmtms apapaiwtit snpgsvpspl
      121 sepppynvvi essaqqemmv ealrgpvppd tvhtsetdtg srtqlqlvlp prlqrfvsdi
      181 hedkdveerf eplepltppp ayetaisdev fanthqpsvl glispsmnte pnphpntgcs
//
LOCUS       XP_041325423             311 aa            linear   VRT 06-MAY-2021
DEFINITION  taste receptor type 2 member 40-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325423
VERSION     XP_041325423.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469489.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="taste receptor type 2 member 40-like"
                     /calculated_mol_wt=35063
     Region          8..294
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          9..33
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320574"
     Region          45..66
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320574"
     Region          83..105
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320574"
     Region          132..148
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320574"
     Region          179..202
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320574"
     Region          230..252
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320574"
     Region          263..288
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320574"
     CDS             1..311
                     /gene="LOC121354702"
                     /coded_by="XM_041469489.1:1..936"
                     /db_xref="GeneID:121354702"
ORIGIN      
        1 mmtsfallfl siaiieslag ilgngiilat issscigsii wppydmivms ltssritlqc
       61 wiildlflti fcepsnyeen ifgfiktgym flnysslwfg awlsvfycik vasftqsffi
      121 wlklriarlv pwmlltswlc sfitaipfaw diysvhenit apssmtnsss mratrkdglg
      181 liillsnagi vmplilsvvs svlliwslwi htrqmqnnas gfrdpsleah rkaiksvfsl
      241 lmfyvtyfia ftfllynifl pfsipksici avmaacptgh sivliwsnpk fqelpariwh
      301 htncsvrtat m
//
LOCUS       XP_041325424             311 aa            linear   VRT 06-MAY-2021
DEFINITION  taste receptor type 2 member 40-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325424
VERSION     XP_041325424.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469490.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="taste receptor type 2 member 40-like"
                     /calculated_mol_wt=34876
     Region          8..292
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          9..33
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320574"
     Region          45..66
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320574"
     Region          83..105
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320574"
     Region          132..148
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320574"
     Region          179..202
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320574"
     Region          230..252
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320574"
     Region          263..288
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320574"
     CDS             1..311
                     /gene="LOC121354703"
                     /coded_by="XM_041469490.1:1..936"
                     /db_xref="GeneID:121354703"
ORIGIN      
        1 mvtsfallcl svgiieslag ilgngiilaa sssscigskt wppydmimis ltsskfilqs
       61 wnildylmni fyepffrten llivsktift flsysslwfg awlsvfycik vasftqsffi
      121 wlklriarlv pwmlltswlc sfitaipfaw diysvhenit apssmtnsss mratrkdglg
      181 liillsnagi vmplilsvvs svlliwslwi htrqmqnnas gfrdpsleah rkaiksvcsf
      241 lilyiiyfic vllllfsifs plsngelicv iimaacptgh sivliwsnpk fqdlparmwh
      301 lincsvrtal m
//
LOCUS       XP_041325425             918 aa            linear   VRT 06-MAY-2021
DEFINITION  chloride channel protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325425
VERSION     XP_041325425.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469491.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..918
                     /product="chloride channel protein 1"
                     /calculated_mol_wt=102220
     Region          <147..524
                     /region_name="ClC_1_like"
                     /note="ClC-1-like chloride channel proteins. This CD
                     includes isoforms ClC-0, ClC-1, ClC-2 and ClC_K. ClC-1 is
                     expressed in skeletal muscle and its mutation leads to
                     both recessively and dominantly-inherited forms of muscle
                     stiffness or myotonia. ClC-K is...; cd03683"
                     /db_xref="CDD:239655"
     Site            164
                     /site_type="active"
                     /note="putative pore gating glutamate residue [active]"
                     /db_xref="CDD:239655"
     Region          537..791
                     /region_name="CBS_pair_voltage-gated_CLC_euk_bac"
                     /note="Two tandem repeats of the cystathionine
                     beta-synthase (CBS pair) domains associated with the
                     voltage gated CLC (chloride channel) in eukaryotes and
                     bacteria; cd04591"
                     /db_xref="CDD:341367"
     Site            order(542,544..546,568..570,770,782,784,786..787,790)
                     /site_type="other"
                     /note="ligand binding site II [chemical binding]"
                     /db_xref="CDD:341367"
     Region          542..742
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     Site            order(568,583,587..588,591,748,770..772,786)
                     /site_type="other"
                     /note="putative ligand binding site I [chemical binding]"
                     /db_xref="CDD:341367"
     Region          748..790
                     /region_name="CBS repeat"
                     /note="CBS repeat [structural motif]"
                     /db_xref="CDD:341367"
     CDS             1..918
                     /gene="CLCN1"
                     /coded_by="XM_041469491.1:177..2933"
                     /db_xref="GeneID:121354704"
ORIGIN      
        1 msvrssggme ssesktqeai wkpalwegtp qydyvcfekc trygipveag qqaratgddl
       61 rspenspsyp qlygrytdri tdnisdqeaa kllkkqaqrn ngrplkrdsq vqikeehysk
      121 cqdcakriqk yvtkklgedw iflvllglvm alvswgvdya saktgpfvhi asicavvlsk
      181 fmsifcgvye qpyyytdvlt vgcavgvgcc fgtplggvlf sievtstyfa vrnywrgffa
      241 atfsafvfrv lavwnkdavt italfrtnfr mdfpfdlqel pafaiigics gflgaffvyl
      301 nrqvvlgirr hkalsqfltk yrliypavit fciasvtfph gfgqfmagel mpreaistlf
      361 dnytwikhsg dtqilgksaa wvhpkvsvfv tillfflvkf cmaviattmp ipcggfmpvf
      421 vlgaafgrli geimaslfpn gilfddilyq ilpggyavig aaaltgavsh tvstavicfe
      481 ltgqishilp mmvavilanm vaqslqpsly dsiiqvkklp ylpdlgwnhi skynifvedi
      541 mvqdvkfvss nckyrdlqev lqsttvkslp lvdspesmil lgsverselq allqthispe
      601 rrrllnremq qklneapydg pwanlpklkh esfayvdede dteekgelpr ppsptpsype
      661 epngptsplk qmpeslepqq hsgsfrslrk liqqllchcs hphetestiq epvevietmt
      721 peeidaweqe elnksvcfds crvdpspfql vertslhkth tlfsllglsh ayvtsmgklr
      781 gvlaleelqk aiegstrsgv rlrpplasfr dinrtsistk vgqdaqawsr eddgtvaaeq
      841 aanlgtespl ppcshspqps hsqeegevps sayatdtele emeltgrvae nisdilkdin
      901 lrttdldede dededvpl
//
LOCUS       XP_041325427            1089 aa            linear   VRT 06-MAY-2021
DEFINITION  antigen WC1.1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325427
VERSION     XP_041325427.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469493.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523095.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1089
                     /product="antigen WC1.1-like"
                     /calculated_mol_wt=117953
     Region          28..128
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          133..231
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          237..336
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          342..440
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          451..546
                     /region_name="SRCR"
                     /note="Scavenger receptor cysteine-rich domain; pfam00530"
                     /db_xref="CDD:459844"
     Region          551..651
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          656..756
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          782..882
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     CDS             1..1089
                     /gene="LOC121354705"
                     /coded_by="XM_041469493.1:1..3270"
                     /db_xref="GeneID:121354705"
ORIGIN      
        1 matkgllsap vlwlillsiq vslgtdelrl sngtgpcsgr vevkheeqwg tvcdgdwtik
       61 daevvckqlq cgsavkalnr apfgqgtgpt wlyrvdchgd esalwncsht gwgaftcphy
      121 fdigvicsgf sdmrltggdt acsghlkvkk eetwatvcfs hidfktasvi cnelkcgqav
      181 dtlrgthfgd ryeliwqeef hcegnethla dcprsmhhtn tcshdatvvc sgyggyrlan
      241 gnttcsgrve llhggiwgtl cdylwdlpaa nilcqqldcg vallipsges fgegnvsvwn
      301 atfncqkngs llrecpvral gqdecpagke ahvvcsgcpg grlvngttcs gtveirhgdt
      361 wgklchshwn lqaanvlchq lncgyaksiq medsfvdgng piwrdafhck gtesclwdcv
      421 qvtlgnptcs akeaatvtcs glaeslrlsg gesrcggrve islhgvwsrv ldddwdirda
      481 hvvcrqlqcg taekayylpk sergaglvgl rsiqctgnet qlmlcntshy qtvptgvsed
      541 vgvicsgsrq mrlvngtnrc agrvelyhhg iwgticddnw dlsdanvvck qlgcghaiea
      601 fvsahygegs gqiwlddvnc tgaesdlwsc psrawgqhnc qhkedagvlc sdflalrlvn
      661 gndcagrvev fyngtwgsvc snrmslltav tmckhlgcgd gggiatdsqy grgsgptwld
      721 hiecteqhss lwqcqsdpwh pqsctnraee thitctgrke atspaafaec pnstscsdre
      781 klrvmggede csgrvemwhq gswgticdds wdvadanvvc rqlgcgsavs alseaafgeg
      841 tgpiwlekvh ckgtelslwd cpakplfgkn cdhkedagvn csgvtettas ptradrprrp
      901 atgstrlsvp vilcivlgtl lclvlailag qirrartqqr gglsydpfse avyeeidynl
      961 mrekqgmtfl sglcvskpke qfyradsdee ngpgatqeas plpenaledg yddateapgp
     1021 rdaslseqne qeiigipges drnkdsqtge agravlfywt rrnrtseaer psspaledts
     1081 yddieelgh
//
LOCUS       XP_041325428             182 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 223 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325428
VERSION     XP_041325428.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469494.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523107.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..182
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..182
                     /product="transmembrane protein 223 isoform X1"
                     /calculated_mol_wt=19615
     Region          16..177
                     /region_name="TMEM70"
                     /note="TMEM70/TMEM186/TMEM223 protein family; pfam06979"
                     /db_xref="CDD:462058"
     CDS             1..182
                     /gene="TMEM223"
                     /coded_by="XM_041469494.1:120..668"
                     /db_xref="GeneID:121354706"
ORIGIN      
        1 maaraaldaa vaaasrdvvl yehdrsrffr lvglfcagqg llwaylarfa ftalrpvpap
       61 gagtddplrp rdnkwrfgft ascltvgslt vaagwllplr svarltllrg gaavaigtpg
      121 plglgrrtlt vplrdvsgra hrsqartvpl kvrgrplffl vdtagtlrep rlfdvtafkf
      181 rf
//
LOCUS       XP_041325429             167 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 223 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325429
VERSION     XP_041325429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469495.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523107.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..167
                     /product="transmembrane protein 223 isoform X2"
                     /calculated_mol_wt=17737
     Region          16..>90
                     /region_name="TMEM70"
                     /note="TMEM70/TMEM186/TMEM223 protein family; pfam06979"
                     /db_xref="CDD:462058"
     CDS             1..167
                     /gene="TMEM223"
                     /coded_by="XM_041469495.1:123..626"
                     /db_xref="GeneID:121354706"
ORIGIN      
        1 maaraaldaa vaaasrdvvl yehdrsrffr lvglfcagqg llwaylarfa ftalrpvpap
       61 gagtddplrp rdnkwrfgft ascltvgtpg hrgditgtpg qlrepsasrg qwghhgdtgt
      121 pgghhrdssg slplvgtvrg qrgditgtpg qlrerrlfdv tvgvfsf
//
LOCUS       XP_041325430             966 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon-induced very large GTPase 1-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325430
VERSION     XP_041325430.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469496.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523129.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>966
                     /product="interferon-induced very large GTPase 1-like"
     Region          242..>313
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Region          251..>425
                     /region_name="RHD3_GTPase"
                     /note="Root hair defective 3 GTP-binding protein (RHD3)
                     GTPase domain; pfam05879"
                     /db_xref="CDD:461768"
     Site            252..259
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            278
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            282..284
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            305..308
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     CDS             1..966
                     /gene="LOC121354707"
                     /coded_by="XM_041469496.1:<1..>2898"
                     /db_xref="GeneID:121354707"
ORIGIN      
        1 dadqpacvtg kakakelvel lkkeklseik srllplqgkl wyqwcqrdke ltrlqekrnk
       61 siehhrsqie nekkairekq lqqafplktl mksflgflqa qptdtkkyfl qwmkifidel
      121 scgsleelrr dyhelwseil srkksekkps gndalvsrld alsdeindss iglehllrev
      181 gqiyealeli sckkdnfvkl peiaaelmdl gypvelmdgd asylplrwvg aifdslierl
      241 gdkrvfvlsv lgiqstgkst llnamfglqf svsagrctrg afmqlipvge elqqdlgfdf
      301 vlvvdteglr aiemankqsl nhdnelatfv igvgnvtvin ifgenpsemq dvlqiavqaf
      361 lrmkkvnlsp scvfvhqnvg eatakeqnme gqrrlqekld emtvvaaqqe fcdvssfsdv
      421 iafdvnthih yfahlwegnp pmappnptys qnvqqlkski lqaaknqsqc silrlsslkd
      481 rigdlwnall nenfvfsfkn sleiavyrkl esafsqwtwr lrshildvqm rldnkirngd
      541 rqnvtrehle glvretsdai ekevekyfre dkdretliqw ksstelklke lketllhetk
      601 kkcenlielq keqrkldark lqyedellrk srdlagrlkg kslsegelkd nftvvwnkwi
      661 aevssaarpp ervdidaeie dvlvehfkep gfharitsfp rgrgfsfdpe khtmkkksgl
      721 fqgvmrlfnt ddinfhhitd niiacvmani akkeqekqdy srnfiheiln evqkgvnsvp
      781 ssakctfnre ysidlslylc kiaagrfkam heafrkandp vaylsskred fflcfqiscq
      841 gatsgttfat flcdkiepal lqavfkrtak diaedmqgqf rdfqgsranl eicilrylae
      901 qenfeyfkqy lrspkqfcqc yietrvrnyc ldgsrrlrmf ldcslnnlyr nilsaaslst
      961 qivkdr
//
LOCUS       XP_041325431             203 aa            linear   VRT 06-MAY-2021
DEFINITION  vesicular glutamate transporter 1-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325431
VERSION     XP_041325431.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469497.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523172.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>203
                     /product="vesicular glutamate transporter 1-like"
     Region          1..>151
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     CDS             1..203
                     /gene="LOC121354708"
                     /coded_by="XM_041469497.1:<1..>609"
                     /db_xref="GeneID:121354708"
ORIGIN      
        1 raqfnwdpet vgmihgsffw gyivtqipgg fiaqkfaanr vfglaivsts vlnmlipsaa
       61 rahvgcviav rvmqglvegv typachgiws kwapplersr lattafcgsy agavvampla
      121 gvlvqytgws svfyvygsfg vlwyffwvlv syespaqhpt ispeerkyie esigesagsn
      181 plllatpwrq lvilgavdeh wdw
//
LOCUS       XP_041325432            1353 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear mitotic apparatus protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325432
VERSION     XP_041325432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1353
                     /product="nuclear mitotic apparatus protein 1 isoform X1"
                     /calculated_mol_wt=152569
     Region          49..844
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <699..>1003
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1114..1170
                     /region_name="NuMA_LGNBD"
                     /note="LGN binding domain (LGNBD) of nuclear mitotic
                     apparatus protein (NuMA) and similar proteins; cd22298"
                     /db_xref="CDD:412093"
     Site            order(1114..1119,1141..1143,1146..1147,1149,1151..1155,
                     1159..1164,1166)
                     /site_type="other"
                     /note="LGN binding site [polypeptide binding]"
                     /db_xref="CDD:412093"
     CDS             1..1353
                     /gene="NUMA1"
                     /coded_by="XM_041469498.1:221..4282"
                     /db_xref="GeneID:121354709"
ORIGIN      
        1 mqqridrlvk lsekqtedrl epkemeelre kneslvgrlh eafrqcqdlk tekaqmdrki
       61 nqlseengdl sfklreiasn mvqlqralne lseehntama qsqekqrqle kelhaalqdk
      121 kcseekieil qgkisvledq lakleecstq ekgevmgdil ksdpiqspcs svcqleelkq
      181 evssltakgl eleeekrqlt slvtslqnsl seshwaqerl krdlpaqaae ghaerlaals
      241 vqheqalrer dsalqqlqqa ntslrsqlqt vdeekaalsr kvgeleaqil elgaqqqqgv
      301 aaealktqlq elegklkesq qrlaerekla rensrlqeql lfleeslrnt egiledekrr
      361 aaeclegnla riaeleaerq qlvqgrelal pgqgeelatr qlpeesqeqp vgaspaarge
      421 dkecrrlkee iqalsrehsr tcqqlqaeqe kveaqaerla slqadlsstq swakekesee
      481 qrlraeissl qekmavaeqt aaqrvaklev daqrtaeale gvsqqlsqek lkskelegtv
      541 dqlriaekel vslrsamqek eswkeqvsqc vqemerknsl isslehevsi lhhqvtekeg
      601 eskelkrlil aesekskkle erlrvlqtem ataasraaer cslmkvevqr cqeemekqrm
      661 tiealkrdrh cqseredelr qeakvcqdkc lqkeqllaal qqeldstrak haslesqhhq
      721 dleqrakavs tlqaelaqak levaevpslr eqlaekdrai qqlqadaaev gtqlaglqqa
      781 narlaeenqg lsksrsqgqr qleaelgqar erhmqeleql raaseklvts srqeakeavq
      841 klenlskeye sskaaaleek kklleerkkl leekqrltsq veqleiiqkd qtkqvdelnk
      901 kltqhekatr tqqqrvkale gelqaavtsh qekmaelqvq ltqkeqaaeh ykgqmekaks
      961 hydakkqqnq elseklkame hlqkentelr skserlakel qqsilqakes emscknltsq
     1021 ihsleaqvev skrqvqelgk fqvmtatvkk qaeseelvci kniplaqstk tsspakgrlh
     1081 sgastrslts frsqetlekl eassaettpg tsglpgyrpa trsslrlqqt sssslsvcgq
     1141 gqstmklgmc qdepeqlddw nrlaelqrrn qacpphlkts ypiesmpsts sgtitdedvk
     1201 mgdpeetlqr gsgqpsqvis tgsqsstqtp ssittrqrkr lleethqspd tplskkrsrc
     1261 plpqtthdrs aqsgfqvsqd seqpgpatpa qrrqsvafsi nnprvlgrrl lrravaqrst
     1321 ptsssgtrhs sriatakspk gkasrqsrkd rqs
//
LOCUS       XP_041325433            1346 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear mitotic apparatus protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325433
VERSION     XP_041325433.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469499.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1346
                     /product="nuclear mitotic apparatus protein 1 isoform X2"
                     /calculated_mol_wt=151838
     Region          49..844
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <749..>1046
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1107..1163
                     /region_name="NuMA_LGNBD"
                     /note="LGN binding domain (LGNBD) of nuclear mitotic
                     apparatus protein (NuMA) and similar proteins; cd22298"
                     /db_xref="CDD:412093"
     Site            order(1107..1112,1134..1136,1139..1140,1142,1144..1148,
                     1152..1157,1159)
                     /site_type="other"
                     /note="LGN binding site [polypeptide binding]"
                     /db_xref="CDD:412093"
     CDS             1..1346
                     /gene="NUMA1"
                     /coded_by="XM_041469499.1:221..4261"
                     /db_xref="GeneID:121354709"
ORIGIN      
        1 mqqridrlvk lsekqtedrl epkemeelre kneslvgrlh eafrqcqdlk tekaqmdrki
       61 nqlseengdl sfklreiasn mvqlqralne lseehntama qsqekqrqle kelhaalqdk
      121 kcseekieil qgkisvledq lakleecstq ekgevmgdil ksdpiqspcs svcqleelkq
      181 evssltakgl eleeekrqlt slvtslqnsl seshwaqerl krdlpaqaae ghaerlaals
      241 vqheqalrer dsalqqlqqa ntslrsqlqt vdeekaalsr kvgeleaqil elgaqqqqgv
      301 aaealktqlq elegklkesq qrlaerekla rensrlqeql lfleeslrnt egiledekrr
      361 aaeclegnla riaeleaerq qlvqgrelal pgqgeelatr qlpeesqeqp vgaspaarge
      421 dkecrrlkee iqalsrehsr tcqqlqaeqe kveaqaerla slqadlsstq swakekesee
      481 qrlraeissl qekmavaeqt aaqrvaklev daqrtaeale gvsqqlsqek lkskelegtv
      541 dqlriaekel vslrsamqek eswkeqvsqc vqemerknsl isslehevsi lhhqvtekeg
      601 eskelkrlil aesekskkle erlrvlqtem ataasraaer cslmkvevqr cqeemekqrm
      661 tiealkrdrh cqseredelr qeakvcqdkc lqkeqllaal qqeldstrak haslesqhhq
      721 dleqrakavs tlqaelaqak levaevpslr eqlaekdrai qqlqadaaev gtqlaglqqa
      781 narlaeenqg lsksrsqgqr qleaelgqar erhmqeleql raaseklvts srqeakeavq
      841 klenlskeye sskaaaleek kklleerkkl leekqrltsq veqleiiqkd qtkqvdelnk
      901 kltqhekatr tqqqrvkale gelqaavtsh qekmaelqvq ltqkeqaaeh ykgqmekaks
      961 hydakkqqnq elseklkame hlqkentelr skserlakel qqsilqakes emscknltsq
     1021 ihsleaqvev skrqvqelgk fqkqaeseel vcikniplaq stktsspakg rlhsgastrs
     1081 ltsfrsqetl ekleassaet tpgtsglpgy rpatrsslrl qqtsssslsv cgqgqstmkl
     1141 gmcqdepeql ddwnrlaelq rrnqacpphl ktsypiesmp stssgtitde dvkmgdpeet
     1201 lqrgsgqpsq vistgsqsst qtpssittrq rkrlleethq spdtplskkr srcplpqtth
     1261 drsaqsgfqv sqdseqpgpa tpaqrrqsva fsinnprvlg rrllrravaq rstptsssgt
     1321 rhssriatak spkgkasrqs rkdrqs
//
LOCUS       XP_041325434            1340 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear mitotic apparatus protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325434
VERSION     XP_041325434.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469500.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1340
                     /product="nuclear mitotic apparatus protein 1 isoform X3"
                     /calculated_mol_wt=151236
     Region          73..967
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1101..1157
                     /region_name="NuMA_LGNBD"
                     /note="LGN binding domain (LGNBD) of nuclear mitotic
                     apparatus protein (NuMA) and similar proteins; cd22298"
                     /db_xref="CDD:412093"
     Site            order(1101..1106,1128..1130,1133..1134,1136,1138..1142,
                     1146..1151,1153)
                     /site_type="other"
                     /note="LGN binding site [polypeptide binding]"
                     /db_xref="CDD:412093"
     CDS             1..1340
                     /gene="NUMA1"
                     /coded_by="XM_041469500.1:220..4242"
                     /db_xref="GeneID:121354709"
ORIGIN      
        1 mqqridrlvk lsekqtedrl epkemeelre kneslvgrlh eafrqcqdlk tekaqmdrki
       61 nqlseengdl sfklreiasn mvqlqralne lseehntama qsqekqrqle kelhaalqdk
      121 kcseekieil qgkisvledq lakleecstq ekgevmgdil kleelkqevs sltakglele
      181 eekrqltslv tslqnslses hwaqerlkrd lpaqaaegha erlaalsvqh eqalrerdsa
      241 lqqlqqants lrsqlqtvde ekaalsrkvg eleaqilelg aqqqqgvaae alktqlqele
      301 gklkesqqrl aereklaren srlqeqllfl eeslrntegi ledekrraae clegnlaria
      361 eleaerqqlv qgrelalpgq geelatrqlp eesqeqpvga spaargedke crrlkeeiqa
      421 lsrehsrtcq qlqaeqekve aqaerlaslq adlsstqswa kekeseeqrl raeisslqek
      481 mavaeqtaaq rvaklevdaq rtaealegvs qqlsqeklks kelegtvdql riaekelvsl
      541 rsamqekesw keqvsqcvqe merknsliss lehevsilhh qvtekegesk elkrlilaes
      601 ekskkleerl rvlqtemata asraaercsl mkvevqrcqe emekqrmtie alkrdrhcqs
      661 eredelrqea kvcqdkclqk eqllaalqqe ldstrakhas lesqhhqdle qrakavstlq
      721 aelaqaklev aevpslreql aekdraiqql qadaaevgtq laglqqanar laeenqglsk
      781 srsqgqrqle aelgqarerh mqeleqlraa seklvtssrq eakeavqkle nlskeyessk
      841 aaaleekkkl leerkkllee kqrltsqveq leiiqkdqtk qvdelnkklt qhekatrtqq
      901 qrvkalegel qaavtshqek maelqvqltq keqaaehykg qmekakshyd akkqqnqels
      961 eklkamehlq kentelrsks erlakelqqs ilqakesems cknltsqihs leaqvevskr
     1021 qvqelgkfqv mtatvkkqae seelvcikni plaqstktss pakgrlhsga strsltsfrs
     1081 qetlekleas saettpgtsg lpgyrpatrs slrlqqtsss slsvcgqgqs tmklgmcqde
     1141 peqlddwnrl aelqrrnqac pphlktsypi esmpstssgt itdedvkmgd peetlqrgsg
     1201 qpsqvistgs qsstqtpssi ttrqrkrlle ethqspdtpl skkrsrcplp qtthdrsaqs
     1261 gfqvsqdseq pgpatpaqrr qsvafsinnp rvlgrrllrr avaqrstpts ssgtrhssri
     1321 atakspkgka srqsrkdrqs
//
LOCUS       XP_041325435            1331 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear mitotic apparatus protein 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325435
VERSION     XP_041325435.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469501.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1331
                     /product="nuclear mitotic apparatus protein 1 isoform X4"
                     /calculated_mol_wt=150081
     Region          49..844
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <699..>1003
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1092..1148
                     /region_name="NuMA_LGNBD"
                     /note="LGN binding domain (LGNBD) of nuclear mitotic
                     apparatus protein (NuMA) and similar proteins; cd22298"
                     /db_xref="CDD:412093"
     Site            order(1092..1097,1119..1121,1124..1125,1127,1129..1133,
                     1137..1142,1144)
                     /site_type="other"
                     /note="LGN binding site [polypeptide binding]"
                     /db_xref="CDD:412093"
     CDS             1..1331
                     /gene="NUMA1"
                     /coded_by="XM_041469501.1:220..4215"
                     /db_xref="GeneID:121354709"
ORIGIN      
        1 mqqridrlvk lsekqtedrl epkemeelre kneslvgrlh eafrqcqdlk tekaqmdrki
       61 nqlseengdl sfklreiasn mvqlqralne lseehntama qsqekqrqle kelhaalqdk
      121 kcseekieil qgkisvledq lakleecstq ekgevmgdil ksdpiqspcs svcqleelkq
      181 evssltakgl eleeekrqlt slvtslqnsl seshwaqerl krdlpaqaae ghaerlaals
      241 vqheqalrer dsalqqlqqa ntslrsqlqt vdeekaalsr kvgeleaqil elgaqqqqgv
      301 aaealktqlq elegklkesq qrlaerekla rensrlqeql lfleeslrnt egiledekrr
      361 aaeclegnla riaeleaerq qlvqgrelal pgqgeelatr qlpeesqeqp vgaspaarge
      421 dkecrrlkee iqalsrehsr tcqqlqaeqe kveaqaerla slqadlsstq swakekesee
      481 qrlraeissl qekmavaeqt aaqrvaklev daqrtaeale gvsqqlsqek lkskelegtv
      541 dqlriaekel vslrsamqek eswkeqvsqc vqemerknsl isslehevsi lhhqvtekeg
      601 eskelkrlil aesekskkle erlrvlqtem ataasraaer cslmkvevqr cqeemekqrm
      661 tiealkrdrh cqseredelr qeakvcqdkc lqkeqllaal qqeldstrak haslesqhhq
      721 dleqrakavs tlqaelaqak levaevpslr eqlaekdrai qqlqadaaev gtqlaglqqa
      781 narlaeenqg lsksrsqgqr qleaelgqar erhmqeleql raaseklvts srqeakeavq
      841 klenlskeye sskaaaleek kklleerkkl leekqrltsq veqleiiqkd qtkqvdelnk
      901 kltqhekatr tqqqrvkale gelqaavtsh qekmaelqvq ltqkeqaaeh ykgqmekaks
      961 hydakkqqnq elseklkame hlqkentelr skserlakel qqsilqakes emscknltsq
     1021 ihsleaqkqa eseelvcikn iplaqstkts spakgrlhsg astrsltsfr sqetleklea
     1081 ssaettpgts glpgyrpatr sslrlqqtss sslsvcgqgq stmklgmcqd epeqlddwnr
     1141 laelqrrnqa cpphlktsyp iesmpstssg titdedvkmg dpeetlqrgs gqpsqvistg
     1201 sqsstqtpss ittrqrkrll eethqspdtp lskkrsrcpl pqtthdrsaq sgfqvsqdse
     1261 qpgpatpaqr rqsvafsinn prvlgrrllr ravaqrstpt sssgtrhssr iatakspkgk
     1321 asrqsrkdrq s
//
LOCUS       XP_041325436            1317 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear mitotic apparatus protein 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325436
VERSION     XP_041325436.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469502.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1317
                     /product="nuclear mitotic apparatus protein 1 isoform X5"
                     /calculated_mol_wt=148676
     Region          49..844
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <699..>1003
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          1114..1170
                     /region_name="NuMA_LGNBD"
                     /note="LGN binding domain (LGNBD) of nuclear mitotic
                     apparatus protein (NuMA) and similar proteins; cd22298"
                     /db_xref="CDD:412093"
     Site            order(1114..1119,1141..1143,1146..1147,1149,1151..1155,
                     1159..1164,1166)
                     /site_type="other"
                     /note="LGN binding site [polypeptide binding]"
                     /db_xref="CDD:412093"
     CDS             1..1317
                     /gene="NUMA1"
                     /coded_by="XM_041469502.1:225..4178"
                     /db_xref="GeneID:121354709"
ORIGIN      
        1 mqqridrlvk lsekqtedrl epkemeelre kneslvgrlh eafrqcqdlk tekaqmdrki
       61 nqlseengdl sfklreiasn mvqlqralne lseehntama qsqekqrqle kelhaalqdk
      121 kcseekieil qgkisvledq lakleecstq ekgevmgdil ksdpiqspcs svcqleelkq
      181 evssltakgl eleeekrqlt slvtslqnsl seshwaqerl krdlpaqaae ghaerlaals
      241 vqheqalrer dsalqqlqqa ntslrsqlqt vdeekaalsr kvgeleaqil elgaqqqqgv
      301 aaealktqlq elegklkesq qrlaerekla rensrlqeql lfleeslrnt egiledekrr
      361 aaeclegnla riaeleaerq qlvqgrelal pgqgeelatr qlpeesqeqp vgaspaarge
      421 dkecrrlkee iqalsrehsr tcqqlqaeqe kveaqaerla slqadlsstq swakekesee
      481 qrlraeissl qekmavaeqt aaqrvaklev daqrtaeale gvsqqlsqek lkskelegtv
      541 dqlriaekel vslrsamqek eswkeqvsqc vqemerknsl isslehevsi lhhqvtekeg
      601 eskelkrlil aesekskkle erlrvlqtem ataasraaer cslmkvevqr cqeemekqrm
      661 tiealkrdrh cqseredelr qeakvcqdkc lqkeqllaal qqeldstrak haslesqhhq
      721 dleqrakavs tlqaelaqak levaevpslr eqlaekdrai qqlqadaaev gtqlaglqqa
      781 narlaeenqg lsksrsqgqr qleaelgqar erhmqeleql raaseklvts srqeakeavq
      841 klenlskeye sskaaaleek kklleerkkl leekqrltsq veqleiiqkd qtkqvdelnk
      901 kltqhekatr tqqqrvkale gelqaavtsh qekmaelqvq ltqkeqaaeh ykgqmekaks
      961 hydakkqqnq elseklkame hlqkentelr skserlakel qqsilqakes emscknltsq
     1021 ihsleaqvev skrqvqelgk fqvmtatvkk qaeseelvci kniplaqstk tsspakgrlh
     1081 sgastrslts frsqetlekl eassaettpg tsglpgyrpa trsslrlqqt sssslsvcgq
     1141 gqstmklgmc qdepeqlddw nrlaelqrrn qacpphlkts ypiesmpsts sgtitdedvk
     1201 mgdpeetlqr gsgqpsqvis tgsqsstqtp ssittrqrkr lleethqspd tplaqrrqsv
     1261 afsinnprvl grrllrrava qrstptsssg trhssriata kspkgkasrq srkdrqs
//
LOCUS       XP_041325437            1615 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear mitotic apparatus protein 1 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325437
VERSION     XP_041325437.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469503.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1615
                     /product="nuclear mitotic apparatus protein 1 isoform X6"
                     /calculated_mol_wt=182242
     Region          28..173
                     /region_name="HkD_NuMA"
                     /note="Hook domain found in nuclear mitotic apparatus
                     protein (NuMA) and similar proteins; cd22224"
                     /db_xref="CDD:411795"
     Site            order(130,144,147..148,150..151,154..155,158)
                     /site_type="other"
                     /note="putative LIC-binding interface [polypeptide
                     binding]"
                     /db_xref="CDD:411795"
     Region          348..1242
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1376..1432
                     /region_name="NuMA_LGNBD"
                     /note="LGN binding domain (LGNBD) of nuclear mitotic
                     apparatus protein (NuMA) and similar proteins; cd22298"
                     /db_xref="CDD:412093"
     Site            order(1376..1381,1403..1405,1408..1409,1411,1413..1417,
                     1421..1426,1428)
                     /site_type="other"
                     /note="LGN binding site [polypeptide binding]"
                     /db_xref="CDD:412093"
     CDS             1..1615
                     /gene="NUMA1"
                     /coded_by="XM_041469503.1:398..5245"
                     /db_xref="GeneID:121354709"
ORIGIN      
        1 mtseslrnss egsgkepnrl atmsvhgtrv aallawvnst kicpdplsdl sqlqdcsvfi
       61 riihkihgsk egesvleqpl perisfihgf lqkhcrhkla aenlvsaqkl ldgeelalak
      121 vavlllyhta mssknsgdwk efdyktqvel asivkfvldn eeclnenles flqrkaeasl
      181 ssvfssssee hsplfslphk revhflelqr iasfpstnlp stpsspmgdi mqtpqfqlrr
      241 lkeqlaferk kqeeleeevv enhklimekd aqittmqqri drlvklsekq tedrlepkem
      301 eelreknesl vgrlheafrq cqdlktekaq mdrkinqlse engdlsfklr eiasnmvqlq
      361 ralnelseeh ntamaqsqek qrqlekelha alqdkkcsee kieilqgkis vledqlakle
      421 ecstqekgev mgdilkleel kqevssltak gleleeekrq ltslvtslqn slseshwaqe
      481 rlkrdlpaqa aeghaerlaa lsvqheqalr erdsalqqlq qantslrsql qtvdeekaal
      541 srkvgeleaq ilelgaqqqq gvaaealktq lqelegklke sqqrlaerek larensrlqe
      601 qllfleeslr ntegiledek rraaeclegn lariaeleae rqqlvqgrel alpgqgeela
      661 trqlpeesqe qpvgaspaar gedkecrrlk eeiqalsreh srtcqqlqae qekveaqaer
      721 laslqadlss tqswakekes eeqrlraeis slqekmavae qtaaqrvakl evdaqrtaea
      781 legvsqqlsq eklkskeleg tvdqlriaek elvslrsamq ekeswkeqvs qcvqemerkn
      841 slisslehev silhhqvtek egeskelkrl ilaesekskk leerlrvlqt emataasraa
      901 ercslmkvev qrcqeemekq rmtiealkrd rhcqserede lrqeakvcqd kclqkeqlla
      961 alqqeldstr akhaslesqh hqdleqraka vstlqaelaq aklevaevps lreqlaekdr
     1021 aiqqlqadaa evgtqlaglq qanarlaeen qglsksrsqg qrqleaelgq arerhmqele
     1081 qlraaseklv tssrqeakea vqklenlske yesskaaale ekkklleerk klleekqrlt
     1141 sqveqleiiq kdqtkqvdel nkkltqheka trtqqqrvka legelqaavt shqekmaelq
     1201 vqltqkeqaa ehykgqmeka kshydakkqq nqelseklka mehlqkente lrskserlak
     1261 elqqsilqak esemscknlt sqihsleaqv evskrqvqel gkfqvmtatv kkqaeseelv
     1321 cikniplaqs tktsspakgr lhsgastrsl tsfrsqetle kleassaett pgtsglpgyr
     1381 patrsslrlq qtsssslsvc gqgqstmklg mcqdepeqld dwnrlaelqr rnqacpphlk
     1441 tsypiesmps tssgtitded vkmgdpeetl qrgsgqpsqv istgsqsstq tpssittrqr
     1501 krlleethqs pdtplskkrs rcplpqtthd rsaqsgfqvs qdseqpgpat paqrrqsvaf
     1561 sinnprvlgr rllrravaqr stptsssgtr hssriataks pkgkasrqsr kdrqs
//
LOCUS       XP_041325438             371 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325438
VERSION     XP_041325438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469504.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="RING finger protein 121 isoform X1"
                     /calculated_mol_wt=39943
     Region          261..>292
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..371
                     /gene="RNF121"
                     /coded_by="XM_041469504.1:20..1135"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeed lelrhleciy wknleiqgrh qgkeadrsft lvprgemegg
       61 actdacqapw argnacrngp hphrhtcggt appgsveaaa psllqhgdpl pdvgsasvfh
      121 yqaelvavpg dlgallsshs fchfpgnska sgtdntqvcl lflgnssaag lvykwflliy
      181 kisyatgivg ymavmftlfg lnllfrikpe damdfgisll fyglyygvle rdfaemcady
      241 mastigfysa sgmptkhlsd svcavcgqqi fvdvneegii entyrlscnh vypslqlpll
      301 shgaapqflr afdksavthl pgsapsrssg gsdgvrsghe asllhatlpl irdvlqwvyk
      361 eelwgstsgp l
//
LOCUS       XP_041325440             364 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325440
VERSION     XP_041325440.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469506.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..364
                     /product="RING finger protein 121 isoform X2"
                     /calculated_mol_wt=40151
     Region          261..315
                     /region_name="RING-H2_RNF121-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF121, RNF175 and similar proteins; cd16475"
                     /db_xref="CDD:438138"
     CDS             1..364
                     /gene="RNF121"
                     /coded_by="XM_041469506.1:20..1114"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeed lelrhleciy wknleiqgrh qgkeadrsft lvprgemegg
       61 actdacqapw argnacrngp hphrhtcggt appgsveaaa psllqhgdpl pdvgsasvfh
      121 yqaelvavpg dlgallsshs fchfpgnska sgtdntqvcl lflgnssaag lvykwflliy
      181 kisyatgivg ymavmftlfg lnllfrikpe damdfgisll fyglyygvle rdfaemcady
      241 mastigfysa sgmptkhlsd svcavcgqqi fvdvneegii entyrlscnh vfhefcirgw
      301 civgkkqtcp yckekvdlkr mfsnpwerph vmygqlldwl rylvawqpvi iglvqginyi
      361 lgle
//
LOCUS       XP_041325441             362 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325441
VERSION     XP_041325441.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469507.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..362
                     /product="RING finger protein 121 isoform X3"
                     /calculated_mol_wt=39054
     Region          261..>292
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..362
                     /gene="RNF121"
                     /coded_by="XM_041469507.1:20..1108"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeed lelrhleciy wknleiqgrh qgkeadrsft lvprgemegg
       61 actdacqapw argnacrngp hphrhtcggt appgsveaaa psllqhgdpl pdvgsasvfh
      121 yqaelvavpg dlgallsshs fchfpgnska sgtdntqvcl lflgnssaag lvykwflliy
      181 kisyatgivg ymavmftlfg lnllfrikpe damdfgisll fyglyygvle rdfaemcady
      241 mastigfysa sgmptkhlsd svcavcgqqi fvdvneegii entyrlscnh vypslqfplt
      301 chspgfmssa sgagalsgrs rrvhtakrrw isrgcsvipg rgrtsctgsc wtgcatwwpg
      361 sr
//
LOCUS       XP_041325442             344 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325442
VERSION     XP_041325442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="RING finger protein 121 isoform X4"
                     /calculated_mol_wt=39154
     Region          234..>265
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..344
                     /gene="RNF121"
                     /coded_by="XM_041469508.1:560..1594"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 mrpkwrvcqp fhssplligr rgsaepsdwl kidlshlspe erwrvehvrm hakhrgheam
       61 haemvlilia tlvvaqlllv qwkqrhprsy nmvtlfqmwv vplyftikln wwrflviwvl
      121 fsavtafvtf ratrkplvqt tprlvykwfl liykisyatg ivgymavmft lfglnllfri
      181 kpedamdfgi sllfyglyyg vlerdfaemc adymastigf ysasgmptkh lsdsvcavcg
      241 qqifvdvnee giientyrls cnhvypslql pllshgaapq flrafdksav thlpgsapsr
      301 ssggsdgvrs gheasllhat lplirdvlqw vykeelwgst sgpl
//
LOCUS       XP_041325443             338 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325443
VERSION     XP_041325443.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469509.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..338
                     /product="RING finger protein 121 isoform X5"
                     /calculated_mol_wt=36172
     Region          261..>292
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..338
                     /gene="RNF121"
                     /coded_by="XM_041469509.1:20..1036"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeed lelrhleciy wknleiqgrh qgkeadrsft lvprgemegg
       61 actdacqapw argnacrngp hphrhtcggt appgsveaaa psllqhgdpl pdvgsasvfh
      121 yqaelvavpg dlgallsshs fchfpgnska sgtdntqvcl lflgnssaag lvykwflliy
      181 kisyatgivg ymavmftlfg lnllfrikpe damdfgisll fyglyygvle rdfaemcady
      241 mastigfysa sgmptkhlsd svcavcgqqi fvdvneegii entyrlscnh vypslqlpll
      301 shgaapqflr afdksavthl pgsapsrssg gsdgvssp
//
LOCUS       XP_041325444             337 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325444
VERSION     XP_041325444.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469510.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="RING finger protein 121 isoform X6"
                     /calculated_mol_wt=39362
     Region          <66..223
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          234..288
                     /region_name="RING-H2_RNF121-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF121, RNF175 and similar proteins; cd16475"
                     /db_xref="CDD:438138"
     CDS             1..337
                     /gene="RNF121"
                     /coded_by="XM_041469510.1:553..1566"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 mrpkwrvcqp fhssplligr rgsaepsdwl kidlshlspe erwrvehvrm hakhrgheam
       61 haemvlilia tlvvaqlllv qwkqrhprsy nmvtlfqmwv vplyftikln wwrflviwvl
      121 fsavtafvtf ratrkplvqt tprlvykwfl liykisyatg ivgymavmft lfglnllfri
      181 kpedamdfgi sllfyglyyg vlerdfaemc adymastigf ysasgmptkh lsdsvcavcg
      241 qqifvdvnee giientyrls cnhvfhefci rgwcivgkkq tcpyckekvd lkrmfsnpwe
      301 rphvmygqll dwlrylvawq pviiglvqgi nyilgle
//
LOCUS       XP_041325445             332 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325445
VERSION     XP_041325445.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469511.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..332
                     /product="RING finger protein 121 isoform X7"
                     /calculated_mol_wt=37532
     Region          222..>253
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..332
                     /gene="RNF121"
                     /coded_by="XM_041469511.1:20..1018"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeei dlshlspeer wrvehvrmha khrgheamha emvliliatl
       61 vvaqlllvqw kqrhprsynm vtlfqmwvvp lyftiklnww rflviwvlfs avtafvtfra
      121 trkplvqttp rlvykwflli ykisyatgiv gymavmftlf glnllfrikp edamdfgisl
      181 lfyglyygvl erdfaemcad ymastigfys asgmptkhls dsvcavcgqq ifvdvneegi
      241 ientyrlscn hvypslqlpl lshgaapqfl rafdksavth lpgsapsrss ggsdgvrsgh
      301 easllhatlp lirdvlqwvy keelwgstsg pl
//
LOCUS       XP_041325446             325 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325446
VERSION     XP_041325446.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469512.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="RING finger protein 121 isoform X8"
                     /calculated_mol_wt=37740
     Region          <54..211
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          222..276
                     /region_name="RING-H2_RNF121-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF121, RNF175 and similar proteins; cd16475"
                     /db_xref="CDD:438138"
     CDS             1..325
                     /gene="RNF121"
                     /coded_by="XM_041469512.1:20..997"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeei dlshlspeer wrvehvrmha khrgheamha emvliliatl
       61 vvaqlllvqw kqrhprsynm vtlfqmwvvp lyftiklnww rflviwvlfs avtafvtfra
      121 trkplvqttp rlvykwflli ykisyatgiv gymavmftlf glnllfrikp edamdfgisl
      181 lfyglyygvl erdfaemcad ymastigfys asgmptkhls dsvcavcgqq ifvdvneegi
      241 ientyrlscn hvfhefcirg wcivgkkqtc pyckekvdlk rmfsnpwerp hvmygqlldw
      301 lrylvawqpv iiglvqginy ilgle
//
LOCUS       XP_041325447             315 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041325447
VERSION     XP_041325447.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469513.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="RING finger protein 121 isoform X9"
                     /calculated_mol_wt=33527
     Region          205..>236
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..315
                     /gene="RNF121"
                     /coded_by="XM_041469513.1:99..1046"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 meggactdac qapwargnac rngphphrht cggtappgsv eaaapsllqh gdplpdvgsa
       61 svfhyqaelv avpgdlgall sshsfchfpg nskasgtdnt qvcllflgns saaglvykwf
      121 lliykisyat givgymavmf tlfglnllfr ikpedamdfg isllfyglyy gvlerdfaem
      181 cadymastig fysasgmptk hlsdsvcavc gqqifvdvne egiientyrl scnhvypslq
      241 lpllshgaap qflrafdksa vthlpgsaps rssggsdgvr sgheasllha tlplirdvlq
      301 wvykeelwgs tsgpl
//
LOCUS       XP_041325448             315 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041325448
VERSION     XP_041325448.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469514.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="RING finger protein 121 isoform X9"
                     /calculated_mol_wt=33527
     Region          205..>236
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     CDS             1..315
                     /gene="RNF121"
                     /coded_by="XM_041469514.1:136..1083"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 meggactdac qapwargnac rngphphrht cggtappgsv eaaapsllqh gdplpdvgsa
       61 svfhyqaelv avpgdlgall sshsfchfpg nskasgtdnt qvcllflgns saaglvykwf
      121 lliykisyat givgymavmf tlfglnllfr ikpedamdfg isllfyglyy gvlerdfaem
      181 cadymastig fysasgmptk hlsdsvcavc gqqifvdvne egiientyrl scnhvypslq
      241 lpllshgaap qflrafdksa vthlpgsaps rssggsdgvr sgheasllha tlplirdvlq
      301 wvykeelwgs tsgpl
//
LOCUS       XP_041325449             312 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041325449
VERSION     XP_041325449.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469515.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="RING finger protein 121 isoform X10"
                     /calculated_mol_wt=33519
     CDS             1..312
                     /gene="RNF121"
                     /coded_by="XM_041469515.1:20..958"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeed lelrhleciy wknleiqgrh qgkeadrsft lvprgemegg
       61 actdacqapw argnacrngp hphrhtcggt appgsveaaa psllqhgdpl pdvgsasvfh
      121 yqaelvavpg dlgallsshs fchfpgnska sgtdntqvcl lflgnssaag lvykwflliy
      181 kisyatgivg ymavmftlfg lnllfrikpe damdfgisll fyglyygvle rdfaemcady
      241 mastigfplt chspgfmssa sgagalsgrs rrvhtakrrw isrgcsvipg rgrtsctgsc
      301 wtgcatwwpg sr
//
LOCUS       XP_041325450             313 aa            linear   VRT 06-MAY-2021
DEFINITION  RING finger protein 121 isoform X11 [Pyrgilauda ruficollis].
ACCESSION   XP_041325450
VERSION     XP_041325450.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469516.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="RING finger protein 121 isoform X11"
                     /calculated_mol_wt=35892
     Region          <54..211
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Region          222..276
                     /region_name="RING-H2_RNF121-like"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF121, RNF175 and similar proteins; cd16475"
                     /db_xref="CDD:438138"
     CDS             1..313
                     /gene="RNF121"
                     /coded_by="XM_041469516.1:20..961"
                     /db_xref="GeneID:121354711"
ORIGIN      
        1 maavlevevg gpvereaeei dlshlspeer wrvehvrmha khrgheamha emvliliatl
       61 vvaqlllvqw kqrhprsynm vtlfqmwvvp lyftiklnww rflviwvlfs avtafvtfra
      121 trkplvqttp rlvykwflli ykisyatgiv gymavmftlf glnllfrikp edamdfgisl
      181 lfyglyygvl erdfaemcad ymastigfys asgmptkhls dsvcavcgqq ifvdvneegi
      241 ientyrlscn hvfhefcirg wcivgkkqtc pyckekvdlk rmfsnpscaa grgrtsctgs
      301 cwtgcatwwp gsr
//
LOCUS       XP_041325451             174 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-18-binding protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325451
VERSION     XP_041325451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="interleukin-18-binding protein isoform X1"
                     /calculated_mol_wt=18461
     Region          <70..151
                     /region_name="Pox_vIL-18BP"
                     /note="Orthopoxvirus interleukin 18 binding protein;
                     cl23951"
                     /db_xref="CDD:305108"
     CDS             1..174
                     /gene="LOC121354713"
                     /coded_by="XM_041469517.1:258..782"
                     /db_xref="GeneID:121354713"
ORIGIN      
        1 myrsggrtal ggtshdlsdp grrmlgeplg sparilllcw glaacctgam alqppsittl
       61 qmpaelphpg esvtvsceal selpestlly wlengffves lhpdgavreg tvqeelqgsg
      121 walhrdlhfs sfnsqhlhtn ftcvvlsplg vdtrevrwps qalapvtgks gglg
//
LOCUS       XP_041325452             242 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-18-binding protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325452
VERSION     XP_041325452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..242
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..242
                     /product="interleukin-18-binding protein isoform X2"
                     /calculated_mol_wt=25622
     Region          <138..219
                     /region_name="Pox_vIL-18BP"
                     /note="Orthopoxvirus interleukin 18 binding protein;
                     cl23951"
                     /db_xref="CDD:305108"
     CDS             1..242
                     /gene="LOC121354713"
                     /coded_by="XM_041469518.1:16..744"
                     /db_xref="GeneID:121354713"
ORIGIN      
        1 mcipacrphr aqgawsagdt rhvhgarkhg garpidtrqr pgeglraaat rhvagagpra
       61 apgesrrcls plpapphksp rsrapppvse artlqplgsp arilllcwgl aacctgamal
      121 qppsittlqm paelphpges vtvscealse lpestllywl engffveslh pdgavregtv
      181 qeelqgsgwa lhrdlhfssf nsqhlhtnft cvvlsplgvd trevrwpsqa lapvtgksgg
      241 lg
//
LOCUS       XP_041325454             259 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane O-methyltransferase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325454
VERSION     XP_041325454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="transmembrane O-methyltransferase isoform X1"
                     /calculated_mol_wt=29366
     Region          85..>217
                     /region_name="TrmR"
                     /note="tRNA 5-hydroxyU34 O-methylase TrmR/YrrM
                     [Translation, ribosomal structure and biogenesis];
                     COG4122"
                     /db_xref="CDD:443298"
     CDS             1..259
                     /gene="TOMT"
                     /coded_by="XM_041469520.1:1..780"
                     /db_xref="GeneID:121354714"
ORIGIN      
        1 mvspaialaf lpfivtllir yrhylmllyr avlvawlrdr ltgtsreqra fqyllahaip
       61 gdphhilqtf dqwcyhcehl scvgpdkgri vervllerap lrvlelgtyc gygtvllaqg
      121 lppgarlyti egdprhaava ekvirlagfs eqmvelivgp seeviprlre khglmnanlv
      181 fmdhwkrsyl rdlrlleshq llaegatila dnvlfpgaph flqyaktcgk yhckvhrasl
      241 eyfraipdgi aelrytstn
//
LOCUS       XP_041325455             234 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane O-methyltransferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325455
VERSION     XP_041325455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="transmembrane O-methyltransferase isoform X2"
                     /calculated_mol_wt=26466
     Region          60..>192
                     /region_name="TrmR"
                     /note="tRNA 5-hydroxyU34 O-methylase TrmR/YrrM
                     [Translation, ribosomal structure and biogenesis];
                     COG4122"
                     /db_xref="CDD:443298"
     CDS             1..234
                     /gene="TOMT"
                     /coded_by="XM_041469521.1:675..1379"
                     /db_xref="GeneID:121354714"
ORIGIN      
        1 mllyravlva wlrdrltgts reqrafqyll ahaipgdphh ilqtfdqwcy hcehlscvgp
       61 dkgrivervl leraplrvle lgtycgygtv llaqglppga rlytiegdpr haavaekvir
      121 lagfseqmve livgpseevi prlrekhglm nanlvfmdhw krsylrdlrl leshqllaeg
      181 atiladnvlf pgaphflqya ktcgkyhckv hrasleyfra ipdgiaelry tstn
//
LOCUS       XP_041325456             234 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane O-methyltransferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325456
VERSION     XP_041325456.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469522.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="transmembrane O-methyltransferase isoform X2"
                     /calculated_mol_wt=26466
     Region          60..>192
                     /region_name="TrmR"
                     /note="tRNA 5-hydroxyU34 O-methylase TrmR/YrrM
                     [Translation, ribosomal structure and biogenesis];
                     COG4122"
                     /db_xref="CDD:443298"
     CDS             1..234
                     /gene="TOMT"
                     /coded_by="XM_041469522.1:346..1050"
                     /db_xref="GeneID:121354714"
ORIGIN      
        1 mllyravlva wlrdrltgts reqrafqyll ahaipgdphh ilqtfdqwcy hcehlscvgp
       61 dkgrivervl leraplrvle lgtycgygtv llaqglppga rlytiegdpr haavaekvir
      121 lagfseqmve livgpseevi prlrekhglm nanlvfmdhw krsylrdlrl leshqllaeg
      181 atiladnvlf pgaphflqya ktcgkyhckv hrasleyfra ipdgiaelry tstn
//
LOCUS       XP_041325457             163 aa            linear   VRT 06-MAY-2021
DEFINITION  ragulator complex protein LAMTOR1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325457
VERSION     XP_041325457.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469523.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..163
                     /product="ragulator complex protein LAMTOR1 isoform X1"
                     /calculated_mol_wt=17991
     Region          23..87
                     /region_name="LAMTOR"
                     /note="Late endosomal/lysosomal adaptor and MAPK and MTOR
                     activator; pfam15454"
                     /db_xref="CDD:464726"
     CDS             1..163
                     /gene="LAMTOR1"
                     /coded_by="XM_041469523.1:536..1027"
                     /db_xref="GeneID:121354715"
ORIGIN      
        1 mpltacvenw lhsqlteeet krllepaasp pskvlngaeq syhnlpsart deqvmlssil
       61 aktainiidv saadsqgmeq heymdrarqy strlamlsnn lthwkklpll psltnqphqv
      121 lasdpvpfad lqqvsriaay afsalsqirv dakeelvvqf gip
//
LOCUS       XP_041325458             161 aa            linear   VRT 06-MAY-2021
DEFINITION  ragulator complex protein LAMTOR1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325458
VERSION     XP_041325458.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469524.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..161
                     /product="ragulator complex protein LAMTOR1 isoform X2"
                     /calculated_mol_wt=17655
     Region          21..85
                     /region_name="LAMTOR"
                     /note="Late endosomal/lysosomal adaptor and MAPK and MTOR
                     activator; pfam15454"
                     /db_xref="CDD:464726"
     CDS             1..161
                     /gene="LAMTOR1"
                     /coded_by="XM_041469524.1:154..639"
                     /db_xref="GeneID:121354715"
ORIGIN      
        1 mgccysneae asdqeeetkr llepaaspps kvlngaeqsy hnlpsartde qvmlssilak
       61 tainiidvsa adsqgmeqhe ymdrarqyst rlamlsnnlt hwkklpllps ltnqphqvla
      121 sdpvpfadlq qvsriaayaf salsqirvda keelvvqfgi p
//
LOCUS       XP_041325459             137 aa            linear   VRT 06-MAY-2021
DEFINITION  ragulator complex protein LAMTOR1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325459
VERSION     XP_041325459.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469525.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..137
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..137
                     /product="ragulator complex protein LAMTOR1 isoform X3"
                     /calculated_mol_wt=14993
     Region          23..74
                     /region_name="LAMTOR"
                     /note="Late endosomal/lysosomal adaptor and MAPK and MTOR
                     activator; pfam15454"
                     /db_xref="CDD:464726"
     CDS             1..137
                     /gene="LAMTOR1"
                     /coded_by="XM_041469525.1:542..955"
                     /db_xref="GeneID:121354715"
ORIGIN      
        1 mpltacvenw lhsqlteeet krllepaasp pskvlngaeq syhnlpsart deqvmlssil
       61 aktaitrlam lsnnlthwkk lpllpsltnq phqvlasdpv pfadlqqvsr iaayafsals
      121 qirvdakeel vvqfgip
//
LOCUS       XP_041325460             766 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325460
VERSION     XP_041325460.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469526.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..766
                     /product="transcription regulator protein BACH1 isoform
                     X1"
                     /calculated_mol_wt=85072
     Region          9..128
                     /region_name="BTB_POZ_BACH1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB and CNC
                     homolog 1 (BACH1); cd18277"
                     /db_xref="CDD:349586"
     Site            order(9..15,18..23,25..26,29,35,50,52,55..57,65,92..93,
                     96..102,119..121,124,127..128)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349586"
     Region          572..642
                     /region_name="bZIP_BACH"
                     /note="Basic leucine zipper (bZIP) domain of BTB and CNC
                     homolog (BACH) proteins: a DNA-binding and dimerization
                     domain; cd14719"
                     /db_xref="CDD:269867"
     Region          576..638
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269867"
     Site            order(584..585,587..589,591..596,598..600)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269867"
     Site            order(599,602..603,606..607,609..610,613..614,616..617,
                     620..621,623..624,627..628,630..631)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269867"
     CDS             1..766
                     /gene="BACH1"
                     /coded_by="XM_041469526.1:563..2863"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vtlkgfspll qfaytaklvl nkdnvsevck caeflgvhni
      121 eescfqflkf rfldfkldqq ecprkkcctq rcqkanpktg nvddgdlein yevealleke
      181 ysqipdtkpc kdeenakssp vlqnnanqnc dpvhlergsa sslssqcpky rkfqkafgnd
      241 kvntsessss ikdvqvppfa tslekeipdn dgiqkaqecv pmqlisncee tqvemeegee
      301 giqkkeelrr dsvtrnvscp vekmdlaafp qnsaaphgln svsvlhsceq ygnlnfssmq
      361 nntvlaektv lstgagndkt esqgnpsskv dlcireatsi tsagdrssve reiaeqlaqg
      421 fwsdvhstda cqihlppavs keyleptysg kksecpwlgi risespepcs qrtfttlnsv
      481 ncpfisnlst egcsntsein sgdyvqgqqq eqcpynyvis lgedsetdte gdsescsare
      541 qecevklpfn aqriislsrn dfqsflkmhk ltpeqldcih dirrrsknri aaqrcrkrkl
      601 dciqnlesei eklqnekenl lkernhilst lgetkqnltg lcqqvckeaa lsqeqiqila
      661 kysssdcpls flfpkreqta psdselvlpa svesangvsg vpptaeqssc yqcvksvcea
      721 aydqvqelhp vpartleqts lvepcgqnsg itdfcqqmtd kcttde
//
LOCUS       XP_041325461             766 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325461
VERSION     XP_041325461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469527.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..766
                     /product="transcription regulator protein BACH1 isoform
                     X1"
                     /calculated_mol_wt=85072
     Region          9..128
                     /region_name="BTB_POZ_BACH1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB and CNC
                     homolog 1 (BACH1); cd18277"
                     /db_xref="CDD:349586"
     Site            order(9..15,18..23,25..26,29,35,50,52,55..57,65,92..93,
                     96..102,119..121,124,127..128)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349586"
     Region          572..642
                     /region_name="bZIP_BACH"
                     /note="Basic leucine zipper (bZIP) domain of BTB and CNC
                     homolog (BACH) proteins: a DNA-binding and dimerization
                     domain; cd14719"
                     /db_xref="CDD:269867"
     Region          576..638
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269867"
     Site            order(584..585,587..589,591..596,598..600)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269867"
     Site            order(599,602..603,606..607,609..610,613..614,616..617,
                     620..621,623..624,627..628,630..631)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269867"
     CDS             1..766
                     /gene="BACH1"
                     /coded_by="XM_041469527.1:151..2451"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vtlkgfspll qfaytaklvl nkdnvsevck caeflgvhni
      121 eescfqflkf rfldfkldqq ecprkkcctq rcqkanpktg nvddgdlein yevealleke
      181 ysqipdtkpc kdeenakssp vlqnnanqnc dpvhlergsa sslssqcpky rkfqkafgnd
      241 kvntsessss ikdvqvppfa tslekeipdn dgiqkaqecv pmqlisncee tqvemeegee
      301 giqkkeelrr dsvtrnvscp vekmdlaafp qnsaaphgln svsvlhsceq ygnlnfssmq
      361 nntvlaektv lstgagndkt esqgnpsskv dlcireatsi tsagdrssve reiaeqlaqg
      421 fwsdvhstda cqihlppavs keyleptysg kksecpwlgi risespepcs qrtfttlnsv
      481 ncpfisnlst egcsntsein sgdyvqgqqq eqcpynyvis lgedsetdte gdsescsare
      541 qecevklpfn aqriislsrn dfqsflkmhk ltpeqldcih dirrrsknri aaqrcrkrkl
      601 dciqnlesei eklqnekenl lkernhilst lgetkqnltg lcqqvckeaa lsqeqiqila
      661 kysssdcpls flfpkreqta psdselvlpa svesangvsg vpptaeqssc yqcvksvcea
      721 aydqvqelhp vpartleqts lvepcgqnsg itdfcqqmtd kcttde
//
LOCUS       XP_041325462             766 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325462
VERSION     XP_041325462.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469528.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..766
                     /product="transcription regulator protein BACH1 isoform
                     X1"
                     /calculated_mol_wt=85072
     Region          9..128
                     /region_name="BTB_POZ_BACH1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB and CNC
                     homolog 1 (BACH1); cd18277"
                     /db_xref="CDD:349586"
     Site            order(9..15,18..23,25..26,29,35,50,52,55..57,65,92..93,
                     96..102,119..121,124,127..128)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349586"
     Region          572..642
                     /region_name="bZIP_BACH"
                     /note="Basic leucine zipper (bZIP) domain of BTB and CNC
                     homolog (BACH) proteins: a DNA-binding and dimerization
                     domain; cd14719"
                     /db_xref="CDD:269867"
     Region          576..638
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269867"
     Site            order(584..585,587..589,591..596,598..600)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269867"
     Site            order(599,602..603,606..607,609..610,613..614,616..617,
                     620..621,623..624,627..628,630..631)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269867"
     CDS             1..766
                     /gene="BACH1"
                     /coded_by="XM_041469528.1:199..2499"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vtlkgfspll qfaytaklvl nkdnvsevck caeflgvhni
      121 eescfqflkf rfldfkldqq ecprkkcctq rcqkanpktg nvddgdlein yevealleke
      181 ysqipdtkpc kdeenakssp vlqnnanqnc dpvhlergsa sslssqcpky rkfqkafgnd
      241 kvntsessss ikdvqvppfa tslekeipdn dgiqkaqecv pmqlisncee tqvemeegee
      301 giqkkeelrr dsvtrnvscp vekmdlaafp qnsaaphgln svsvlhsceq ygnlnfssmq
      361 nntvlaektv lstgagndkt esqgnpsskv dlcireatsi tsagdrssve reiaeqlaqg
      421 fwsdvhstda cqihlppavs keyleptysg kksecpwlgi risespepcs qrtfttlnsv
      481 ncpfisnlst egcsntsein sgdyvqgqqq eqcpynyvis lgedsetdte gdsescsare
      541 qecevklpfn aqriislsrn dfqsflkmhk ltpeqldcih dirrrsknri aaqrcrkrkl
      601 dciqnlesei eklqnekenl lkernhilst lgetkqnltg lcqqvckeaa lsqeqiqila
      661 kysssdcpls flfpkreqta psdselvlpa svesangvsg vpptaeqssc yqcvksvcea
      721 aydqvqelhp vpartleqts lvepcgqnsg itdfcqqmtd kcttde
//
LOCUS       XP_041325463             766 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325463
VERSION     XP_041325463.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469529.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..766
                     /product="transcription regulator protein BACH1 isoform
                     X1"
                     /calculated_mol_wt=85072
     Region          9..128
                     /region_name="BTB_POZ_BACH1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB and CNC
                     homolog 1 (BACH1); cd18277"
                     /db_xref="CDD:349586"
     Site            order(9..15,18..23,25..26,29,35,50,52,55..57,65,92..93,
                     96..102,119..121,124,127..128)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349586"
     Region          572..642
                     /region_name="bZIP_BACH"
                     /note="Basic leucine zipper (bZIP) domain of BTB and CNC
                     homolog (BACH) proteins: a DNA-binding and dimerization
                     domain; cd14719"
                     /db_xref="CDD:269867"
     Region          576..638
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269867"
     Site            order(584..585,587..589,591..596,598..600)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269867"
     Site            order(599,602..603,606..607,609..610,613..614,616..617,
                     620..621,623..624,627..628,630..631)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269867"
     CDS             1..766
                     /gene="BACH1"
                     /coded_by="XM_041469529.1:191..2491"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vtlkgfspll qfaytaklvl nkdnvsevck caeflgvhni
      121 eescfqflkf rfldfkldqq ecprkkcctq rcqkanpktg nvddgdlein yevealleke
      181 ysqipdtkpc kdeenakssp vlqnnanqnc dpvhlergsa sslssqcpky rkfqkafgnd
      241 kvntsessss ikdvqvppfa tslekeipdn dgiqkaqecv pmqlisncee tqvemeegee
      301 giqkkeelrr dsvtrnvscp vekmdlaafp qnsaaphgln svsvlhsceq ygnlnfssmq
      361 nntvlaektv lstgagndkt esqgnpsskv dlcireatsi tsagdrssve reiaeqlaqg
      421 fwsdvhstda cqihlppavs keyleptysg kksecpwlgi risespepcs qrtfttlnsv
      481 ncpfisnlst egcsntsein sgdyvqgqqq eqcpynyvis lgedsetdte gdsescsare
      541 qecevklpfn aqriislsrn dfqsflkmhk ltpeqldcih dirrrsknri aaqrcrkrkl
      601 dciqnlesei eklqnekenl lkernhilst lgetkqnltg lcqqvckeaa lsqeqiqila
      661 kysssdcpls flfpkreqta psdselvlpa svesangvsg vpptaeqssc yqcvksvcea
      721 aydqvqelhp vpartleqts lvepcgqnsg itdfcqqmtd kcttde
//
LOCUS       XP_041325464             766 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325464
VERSION     XP_041325464.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469530.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..766
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..766
                     /product="transcription regulator protein BACH1 isoform
                     X1"
                     /calculated_mol_wt=85072
     Region          9..128
                     /region_name="BTB_POZ_BACH1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB and CNC
                     homolog 1 (BACH1); cd18277"
                     /db_xref="CDD:349586"
     Site            order(9..15,18..23,25..26,29,35,50,52,55..57,65,92..93,
                     96..102,119..121,124,127..128)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349586"
     Region          572..642
                     /region_name="bZIP_BACH"
                     /note="Basic leucine zipper (bZIP) domain of BTB and CNC
                     homolog (BACH) proteins: a DNA-binding and dimerization
                     domain; cd14719"
                     /db_xref="CDD:269867"
     Region          576..638
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269867"
     Site            order(584..585,587..589,591..596,598..600)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269867"
     Site            order(599,602..603,606..607,609..610,613..614,616..617,
                     620..621,623..624,627..628,630..631)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269867"
     CDS             1..766
                     /gene="BACH1"
                     /coded_by="XM_041469530.1:521..2821"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vtlkgfspll qfaytaklvl nkdnvsevck caeflgvhni
      121 eescfqflkf rfldfkldqq ecprkkcctq rcqkanpktg nvddgdlein yevealleke
      181 ysqipdtkpc kdeenakssp vlqnnanqnc dpvhlergsa sslssqcpky rkfqkafgnd
      241 kvntsessss ikdvqvppfa tslekeipdn dgiqkaqecv pmqlisncee tqvemeegee
      301 giqkkeelrr dsvtrnvscp vekmdlaafp qnsaaphgln svsvlhsceq ygnlnfssmq
      361 nntvlaektv lstgagndkt esqgnpsskv dlcireatsi tsagdrssve reiaeqlaqg
      421 fwsdvhstda cqihlppavs keyleptysg kksecpwlgi risespepcs qrtfttlnsv
      481 ncpfisnlst egcsntsein sgdyvqgqqq eqcpynyvis lgedsetdte gdsescsare
      541 qecevklpfn aqriislsrn dfqsflkmhk ltpeqldcih dirrrsknri aaqrcrkrkl
      601 dciqnlesei eklqnekenl lkernhilst lgetkqnltg lcqqvckeaa lsqeqiqila
      661 kysssdcpls flfpkreqta psdselvlpa svesangvsg vpptaeqssc yqcvksvcea
      721 aydqvqelhp vpartleqts lvepcgqnsg itdfcqqmtd kcttde
//
LOCUS       XP_041325465             639 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325465
VERSION     XP_041325465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..639
                     /product="transcription regulator protein BACH1 isoform
                     X2"
                     /calculated_mol_wt=71401
     Region          9..128
                     /region_name="BTB_POZ_BACH1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB and CNC
                     homolog 1 (BACH1); cd18277"
                     /db_xref="CDD:349586"
     Site            order(9..15,18..23,25..26,29,35,50,52,55..57,65,92..93,
                     96..102,119..121,124,127..128)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349586"
     Region          572..>614
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Site            order(584..585,587..589,591..596,598..600)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     CDS             1..639
                     /gene="BACH1"
                     /coded_by="XM_041469531.1:563..2482"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vtlkgfspll qfaytaklvl nkdnvsevck caeflgvhni
      121 eescfqflkf rfldfkldqq ecprkkcctq rcqkanpktg nvddgdlein yevealleke
      181 ysqipdtkpc kdeenakssp vlqnnanqnc dpvhlergsa sslssqcpky rkfqkafgnd
      241 kvntsessss ikdvqvppfa tslekeipdn dgiqkaqecv pmqlisncee tqvemeegee
      301 giqkkeelrr dsvtrnvscp vekmdlaafp qnsaaphgln svsvlhsceq ygnlnfssmq
      361 nntvlaektv lstgagndkt esqgnpsskv dlcireatsi tsagdrssve reiaeqlaqg
      421 fwsdvhstda cqihlppavs keyleptysg kksecpwlgi risespepcs qrtfttlnsv
      481 ncpfisnlst egcsntsein sgdyvqgqqq eqcpynyvis lgedsetdte gdsescsare
      541 qecevklpfn aqriislsrn dfqsflkmhk ltpeqldcih dirrrsknri aaqrcrkrkl
      601 dciqnlesei eklkmlvvcf leksciwnrm tpawleagd
//
LOCUS       XP_041325466             638 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325466
VERSION     XP_041325466.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469532.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..638
                     /product="transcription regulator protein BACH1 isoform
                     X3"
                     /calculated_mol_wt=71273
     Region          9..128
                     /region_name="BTB_POZ_BACH1"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in BTB and CNC
                     homolog 1 (BACH1); cd18277"
                     /db_xref="CDD:349586"
     Site            order(9..15,18..23,25..26,29,35,50,52,55..57,65,92..93,
                     96..102,119..121,124,127..128)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:349586"
     Region          572..>613
                     /region_name="bZIP"
                     /note="Basic leucine zipper (bZIP) domain of bZIP
                     transcription factors: a DNA-binding and dimerization
                     domain; cl21462"
                     /db_xref="CDD:473870"
     Site            order(584..585,587..589,591..596,598..600)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269834"
     CDS             1..638
                     /gene="BACH1"
                     /coded_by="XM_041469532.1:563..2479"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vtlkgfspll qfaytaklvl nkdnvsevck caeflgvhni
      121 eescfqflkf rfldfkldqq ecprkkcctq rcqkanpktg nvddgdlein yevealleke
      181 ysqipdtkpc kdeenakssp vlqnnanqnc dpvhlergsa sslssqcpky rkfqkafgnd
      241 kvntsessss ikdvqvppfa tslekeipdn dgiqkaqecv pmqlisncee tqvemeegee
      301 giqkkeelrr dsvtrnvscp vekmdlaafp qnsaaphgln svsvlhsceq ygnlnfssmq
      361 nntvlaektv lstgagndkt esqgnpsskv dlcireatsi tsagdrssve reiaeqlaqg
      421 fwsdvhstda cqihlppavs keyleptysg kksecpwlgi risespepcs qrtfttlnsv
      481 ncpfisnlst egcsntsein sgdyvqgqqq eqcpynyvis lgedsetdte gdsescsare
      541 qecevklpfn aqriislsrn dfqsflkmhk ltpeqldcih dirrrsknri aaqrcrkrkl
      601 dciqnlesei eklmlvvcfl eksciwnrmt pawleagd
//
LOCUS       XP_041325467             302 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription regulator protein BACH1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325467
VERSION     XP_041325467.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469533.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..302
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..302
                     /product="transcription regulator protein BACH1 isoform
                     X4"
                     /calculated_mol_wt=33766
     Region          9..>83
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          108..178
                     /region_name="bZIP_BACH"
                     /note="Basic leucine zipper (bZIP) domain of BTB and CNC
                     homolog (BACH) proteins: a DNA-binding and dimerization
                     domain; cd14719"
                     /db_xref="CDD:269867"
     Region          112..174
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:269867"
     Site            order(120..121,123..125,127..132,134..136)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:269867"
     Site            order(135,138..139,142..143,145..146,149..150,152..153,
                     156..157,159..160,163..164,166..167)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:269867"
     CDS             1..302
                     /gene="BACH1"
                     /coded_by="XM_041469533.1:563..1471"
                     /db_xref="GeneID:121354716"
ORIGIN      
        1 mslsennsvv fayessvhst nvllslddqr kqdilcdvti lvedqrfrah kavlaacssy
       61 flsrivgqvd adliitlpee vklpfnaqri islsrndfqs flkmhkltpe qldcihdirr
      121 rsknriaaqr crkrkldciq nleseieklq nekenllker nhilstlget kqnltglcqq
      181 vckeaalsqe qiqilakyss sdcplsflfp kreqtapsds elvlpasves angvsgvppt
      241 aeqsscyqcv ksvceaaydq vqelhpvpar tleqtslvep cgqnsgitdf cqqmtdkctt
      301 de
//
LOCUS       XP_041325469             957 aa            linear   VRT 06-MAY-2021
DEFINITION  PAX3- and PAX7-binding protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325469
VERSION     XP_041325469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..957
                     /product="PAX3- and PAX7-binding protein 1 isoform X1"
                     /calculated_mol_wt=108079
     Region          635..846
                     /region_name="GCFC"
                     /note="GC-rich sequence DNA-binding factor-like protein;
                     pfam07842"
                     /db_xref="CDD:400273"
     CDS             1..957
                     /gene="PAXBP1"
                     /coded_by="XM_041469535.1:112..2985"
                     /db_xref="GeneID:121354718"
ORIGIN      
        1 mfrkarrvnv rkrndseeed eerdeeppqe papaagaage gpseasvpla sgagllplpa
       61 gcvplalpgs paafacaasy gaalglglgl mggdraglga lpapavlrpp ppppqpqqgn
      121 glpvagrpke kkrskenkev prasllsfqd eeeeteevfk vkkssyskki vkqlkkeyke
      181 dlekskvrte vnsptdveap lekigqnkdv gqedgtanse hgeeemeves ekeeekpkag
      241 gafssalssl nvlrpgeipd aafihaarkk rqmarelgdf tpvdsepgkg rlvredenda
      301 sddedddekr rivfavkeks qrqkiaeeig iegsddealv ageqdeelsr weqeqirkgi
      361 nipqvqpsqp aevnnvyyqn tyqtlsygss ygipytyaay gssetkaqkt dntvpfktps
      421 nemtpvtidl vkkqlkdrld smkemhkanr qqyekhqqsq edstkaierl egssggiger
      481 ykflqemrgy vqdllecfse kvplineles amhqlykqra srlvqrrqdd ikdessefss
      541 hsnkalmapn ldsfgrdrvi yqeqvkrrta erearrarrr qareqtgkma dhleglssdd
      601 eetstditnf nlerdrilke sskvfedvle sfysidciks qfeawrskyf asykdayigl
      661 clpklfnpli rlqlltwtpl egkcrdfetm lwfesllfyg ceeqeqvkdd adisllptiv
      721 ervvlpkltv iseniwdpfs ttqtsrmvai vqklidgyps vvnaenkntq mllkalllrm
      781 rrtldddvfm plypknilen knsgpylffq rqfwssvkll gnflqwygil snktlqelsi
      841 dgllnryilm afqnseyged sikkaqsvia cfpkqwftnl tgdktisqle nfcrylvhla
      901 dtiyrnsigc sdvekrnare hikqiiklla siraldhavt vandhnvkef kilvegk
//
LOCUS       XP_041325470             915 aa            linear   VRT 06-MAY-2021
DEFINITION  PAX3- and PAX7-binding protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325470
VERSION     XP_041325470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..915
                     /product="PAX3- and PAX7-binding protein 1 isoform X2"
                     /calculated_mol_wt=103179
     Region          593..804
                     /region_name="GCFC"
                     /note="GC-rich sequence DNA-binding factor-like protein;
                     pfam07842"
                     /db_xref="CDD:400273"
     CDS             1..915
                     /gene="PAXBP1"
                     /coded_by="XM_041469536.1:112..2859"
                     /db_xref="GeneID:121354718"
ORIGIN      
        1 mfrkarrvnv rkrndseeed eerdeeppqe papaagaage gpseasvpla sgagllplpa
       61 gcvplalpgs paafacaasy gaalglglgl mggdraglga lpapavlrpp ppppqpqqgn
      121 glpvagrpke kkrskenkev prasllsfqd eeeeteevfk vkkssyskki vkqlkkeyke
      181 dlekskvrte vnsptdveap lekigqnkdv gqedgtanse hgeeemeves ekeeekpkag
      241 gafssalssl nvlrpgeipd aafihaarkk rqmarelgdf tpvdsepgie gsddealvag
      301 eqdeelsrwe qeqirkgini pqvqpsqpae vnnvyyqnty qtlsygssyg ipytyaaygs
      361 setkaqktdn tvpfktpsne mtpvtidlvk kqlkdrldsm kemhkanrqq yekhqqsqed
      421 stkaierleg ssggigeryk flqemrgyvq dllecfsekv plinelesam hqlykqrasr
      481 lvqrrqddik dessefsshs nkalmapnld sfgrdrviyq eqvkrrtaer earrarrrqa
      541 reqtgkmadh leglssddee tstditnfnl erdrilkess kvfedvlesf ysidciksqf
      601 eawrskyfas ykdayiglcl pklfnplirl qlltwtpleg kcrdfetmlw fesllfygce
      661 eqeqvkddad isllptiver vvlpkltvis eniwdpfstt qtsrmvaivq klidgypsvv
      721 naenkntqml lkalllrmrr tldddvfmpl ypknilenkn sgpylffqrq fwssvkllgn
      781 flqwygilsn ktlqelsidg llnryilmaf qnseygedsi kkaqsviacf pkqwftnltg
      841 dktisqlenf crylvhladt iyrnsigcsd vekrnarehi kqiikllasi raldhavtva
      901 ndhnvkefki lvegk
//
LOCUS       XP_041325471             914 aa            linear   VRT 06-MAY-2021
DEFINITION  PAX3- and PAX7-binding protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325471
VERSION     XP_041325471.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469537.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..914
                     /product="PAX3- and PAX7-binding protein 1 isoform X3"
                     /calculated_mol_wt=102992
     Region          592..803
                     /region_name="GCFC"
                     /note="GC-rich sequence DNA-binding factor-like protein;
                     pfam07842"
                     /db_xref="CDD:400273"
     CDS             1..914
                     /gene="PAXBP1"
                     /coded_by="XM_041469537.1:112..2856"
                     /db_xref="GeneID:121354718"
ORIGIN      
        1 mfrkarrvnv rkrndseeed eerdeeppqe papaagaage gpseasvpla sgagllplpa
       61 gcvplalpgs paafacaasy gaalglglgl mggdraglga lpapavlrpp ppppqpqqgn
      121 glpvagrpke kkrskenkev prasllsfqd eeeveaplek igqnkdvgqe dgtansehge
      181 eemeveseke eekpkaggaf ssalsslnvl rpgeipdaaf ihaarkkrqm arelgdftpv
      241 dsepgkgrlv redendasdd edddekrriv favkeksqrq kiaeeigieg sddealvage
      301 qdeelsrweq eqirkginip qvqpsqpaev nnvyyqntyq tlsygssygi pytyaaygss
      361 etkaqktdnt vpfktpsnem tpvtidlvkk qlkdrldsmk emhkanrqqy ekhqqsqeds
      421 tkaierlegs sggigerykf lqemrgyvqd llecfsekvp linelesamh qlykqrasrl
      481 vqrrqddikd essefsshsn kalmapnlds fgrdrviyqe qvkrrtaere arrarrrqar
      541 eqtgkmadhl eglssddeet stditnfnle rdrilkessk vfedvlesfy sidciksqfe
      601 awrskyfasy kdayiglclp klfnplirlq lltwtplegk crdfetmlwf esllfygcee
      661 qeqvkddadi sllptiverv vlpkltvise niwdpfsttq tsrmvaivqk lidgypsvvn
      721 aenkntqmll kalllrmrrt ldddvfmply pknilenkns gpylffqrqf wssvkllgnf
      781 lqwygilsnk tlqelsidgl lnryilmafq nseygedsik kaqsviacfp kqwftnltgd
      841 ktisqlenfc rylvhladti yrnsigcsdv ekrnarehik qiikllasir aldhavtvan
      901 dhnvkefkil vegk
//
LOCUS       XP_041325472             287 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: putative short transient receptor potential
            channel 2-like protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325472
VERSION     XP_041325472.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469538.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 8% of CDS bases
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..287
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..287
                     /product="LOW QUALITY PROTEIN: putative short transient
                     receptor potential channel 2-like protein"
                     /calculated_mol_wt=31749
     Region          44..184
                     /region_name="XRCC1_N"
                     /note="XRCC1 N terminal domain; pfam01834"
                     /db_xref="CDD:460356"
     CDS             1..287
                     /gene="LOC121354719"
                     /coded_by="XM_041469538.1:1..864"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121354719"
ORIGIN      
        1 mgvtagtvtr elcvsplvqn klelegrvfr eglvhdavsl lcvqdpkypa enllsedsir
       61 ltaygcpkdh srqlsvelxl kraspigyvd vdtslctflq fvvgcwpcdq pyltlvptvt
      121 lmtpadskld qnrcrvqmlv eankslgtwh vqscaclqnc sslqltcsqp fgpcscfgls
      181 firlckpqgv awsplrcflg pqspssrqlc pparltlpip rrsreerqlr sclwklegaa
      241 wslahlshsa wmvlltaqnq vlrpragtst lgghpscwpr mwellqw
//
LOCUS       XP_041325474            1301 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325474
VERSION     XP_041325474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1301
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1301
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     5-phosphatase 2 isoform X1"
                     /calculated_mol_wt=143161
     Region          18..116
                     /region_name="SH2_SHIP"
                     /note="Src homology 2 (SH2) domain found in SH2-containing
                     inositol-5'-phosphatase (SHIP) and SLAM-associated protein
                     (SAP); cd10343"
                     /db_xref="CDD:198206"
     Site            order(25,44,65,67)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198206"
     Site            order(65..66,78..79,84,87,103..105)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198206"
     Region          420..723
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(428,469,557,603,605,686,713..714)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(469,713)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(557,605,714)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     Region          915..>1264
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1239..1299
                     /region_name="SAM_Ship2"
                     /note="SAM domain of Ship2 lipid phosphatase proteins;
                     cd09491"
                     /db_xref="CDD:188890"
     Site            order(1265..1267,1269..1270,1273,1278)
                     /site_type="other"
                     /note="heterodimer interface ML [polypeptide binding]"
                     /db_xref="CDD:188890"
     CDS             1..1301
                     /gene="INPPL1"
                     /coded_by="XM_041469540.1:20..3925"
                     /db_xref="GeneID:121354720"
ORIGIN      
        1 magaggagga apvpvppwyh rdlsraaaee qlaragrdgs flvrdsesva gayalcllfq
       61 khvhtyrilp deedflavqt sqgvqvrrfk tlnelialyl qpnqglvctl lfpverekek
      121 etvedrdysd gedekpplpp rsgstsfsgt svglsptglg psvlerpves tnglssishe
      181 ylkgsytldl eavkggansl phlnktlvts ckrlhsevdr vlagleilsk vfdqqsspmv
      241 skilqqtagq sgeqelenlv lklsvlkdfl ssiekkalka lqemssatpa tppqplsrka
      301 ksipvqtfev klditlgdlt kigksqkytl svdveggklv vlkkqkdsqe dwntfthdki
      361 rqliksqrvq nklgivfeke kdktqrkdfv fvsarkreaf cqllqlmknk hshqdepdmi
      421 svfigtwnmg svpppknits witskglgkt ldevtmaiph diyvfgtqen slgdkewvdf
      481 lrtvlkdfte veyrpvamqs lwnikvvvlv kpehenrish vstssvktgi antlgnkgav
      541 gvsfmfngts fgfvnchlts gnektarrnq nyldilrlls lgdkqlssfd islrfthlfw
      601 fgdlnyrldm diqeilnyis rkelepllkv dqlnlekekh kvflrfgeee itfpptyrye
      661 rgsrdtyvwh kqkptgvrtn vpswcdrilw ksypethvnc naygctddiv tsdhspvfgs
      721 fevgvtsqfv skkglsksse qayiefesie aivktssrtk ffiefystcl eefkksfend
      781 sqssdninfl kvqwssrqlp tlkpilseie ylqdqhlllt vksldgyesy gecvialksm
      841 igstaqqflt ylshrgeetg nirgsmkvwv pterlgtrer lyewisidkd ettaskgkvl
      901 lgaratqdna ksagrkptsa eppttilakl peepeksstt aaprppaphr stprdeatps
      961 rskaeampel sggplknsfn npayyvlegv phqllvpgdp gkppkgkvql avpercqcps
     1021 accggesdee edlstlnlpp pdfpppplpr elelppntfl gtpkellvss gcedpkshsa
     1081 afgeaplpkl qprpppaara gfgmegaggm pvtgglpaag glptpgglpa glmddrscsv
     1141 lqmaktlsev dygggkervv ppppllakga lpprclhpdy grplafpphs iqesiqedla
     1201 eevgdtgwvg ilstsagasf gvlsgaeavg vqalgrgvgt vpgvgewlra lgleryeegl
     1261 vrngwddlef lsditeedle eagvrepghk rilleslqlr k
//
LOCUS       XP_041325475            1271 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325475
VERSION     XP_041325475.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469541.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1271
                     /product="phosphatidylinositol 3,4,5-trisphosphate
                     5-phosphatase 2 isoform X2"
                     /calculated_mol_wt=140386
     Region          18..116
                     /region_name="SH2_SHIP"
                     /note="Src homology 2 (SH2) domain found in SH2-containing
                     inositol-5'-phosphatase (SHIP) and SLAM-associated protein
                     (SAP); cd10343"
                     /db_xref="CDD:198206"
     Site            order(25,44,65,67)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198206"
     Site            order(65..66,78..79,84,87,103..105)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198206"
     Region          420..723
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(428,469,557,603,605,686,713..714)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(469,713)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(557,605,714)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     Region          <903..1227
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1209..1269
                     /region_name="SAM_Ship2"
                     /note="SAM domain of Ship2 lipid phosphatase proteins;
                     cd09491"
                     /db_xref="CDD:188890"
     Site            order(1235..1237,1239..1240,1243,1248)
                     /site_type="other"
                     /note="heterodimer interface ML [polypeptide binding]"
                     /db_xref="CDD:188890"
     CDS             1..1271
                     /gene="INPPL1"
                     /coded_by="XM_041469541.1:20..3835"
                     /db_xref="GeneID:121354720"
ORIGIN      
        1 magaggagga apvpvppwyh rdlsraaaee qlaragrdgs flvrdsesva gayalcllfq
       61 khvhtyrilp deedflavqt sqgvqvrrfk tlnelialyl qpnqglvctl lfpverekek
      121 etvedrdysd gedekpplpp rsgstsfsgt svglsptglg psvlerpves tnglssishe
      181 ylkgsytldl eavkggansl phlnktlvts ckrlhsevdr vlagleilsk vfdqqsspmv
      241 skilqqtagq sgeqelenlv lklsvlkdfl ssiekkalka lqemssatpa tppqplsrka
      301 ksipvqtfev klditlgdlt kigksqkytl svdveggklv vlkkqkdsqe dwntfthdki
      361 rqliksqrvq nklgivfeke kdktqrkdfv fvsarkreaf cqllqlmknk hshqdepdmi
      421 svfigtwnmg svpppknits witskglgkt ldevtmaiph diyvfgtqen slgdkewvdf
      481 lrtvlkdfte veyrpvamqs lwnikvvvlv kpehenrish vstssvktgi antlgnkgav
      541 gvsfmfngts fgfvnchlts gnektarrnq nyldilrlls lgdkqlssfd islrfthlfw
      601 fgdlnyrldm diqeilnyis rkelepllkv dqlnlekekh kvflrfgeee itfpptyrye
      661 rgsrdtyvwh kqkptgvrtn vpswcdrilw ksypethvnc naygctddiv tsdhspvfgs
      721 fevgvtsqfv skkglsksse qayiefesie aivktssrtk ffiefystcl eefkksfend
      781 sqssdninfl kvqwssrqlp tlkpilseie ylqdqhlllt vksldgyesy gecvialksm
      841 igstaqqflt ylshrgeetg nirgsmkvwv pterlgtrer lyewisidkd ettaskgkvl
      901 lgaratqdna ksagrkptsa eppttilakl peepeksstt aaprppaphr stprdeatps
      961 rskaeampel sggplknsfn npayyvlegv phqllvpgdp gkppkgkvql avpercqcps
     1021 accggesdee edlstlnlpp pdfpppplpr elelppntfl gtpkellvss gcedpkshsa
     1081 afgeaplpkl qprpppaara gfgmegaggm pvtgglpaag glptpgglpa glmddrscsv
     1141 lqmaktlsev dygggkervv ppppllakga lpprclhpdy grplafpphs iqesiqedla
     1201 eealgrgvgt vpgvgewlra lgleryeegl vrngwddlef lsditeedle eagvrepghk
     1261 rilleslqlr k
//
LOCUS       XP_041325476             274 aa            linear   VRT 06-MAY-2021
DEFINITION  paired mesoderm homeobox protein 2A [Pyrgilauda ruficollis].
ACCESSION   XP_041325476
VERSION     XP_041325476.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469542.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..274
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..274
                     /product="paired mesoderm homeobox protein 2A"
                     /calculated_mol_wt=28978
     Region          88..144
                     /region_name="Homeodomain"
                     /note="pfam00046"
                     /db_xref="CDD:459649"
     CDS             1..274
                     /gene="PHOX2A"
                     /coded_by="XM_041469542.1:31..855"
                     /db_xref="GeneID:121354721"
ORIGIN      
        1 mdysylnsye scvaameasy efspcsqags fqyspmrggf gpapacapla sascalgalr
       61 dhqpspysav pykffsdpsg inekrkqrri rttftssqlk elervfaeth ypdiytreel
      121 alkidltear vqvwfqnrra kfrkqeraan akgasgtgst gkkseprsss eddeskesnc
      181 sptpdstasl paaaigspgg slspspgaga plgpghapqp lkaplwagvg ggsgapntae
      241 llkawqptea vpgpfsgvls sfhrkpngik tnlf
//
LOCUS       XP_041325477            1497 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325477
VERSION     XP_041325477.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469543.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1497
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=168991
     Region          7..66
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          <70..253
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          377..469
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          488..574
                     /region_name="PH2_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 2; cd13254"
                     /db_xref="CDD:270074"
     Region          584..699
                     /region_name="ArfGap_ARAP"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing proteins; cd08837"
                     /db_xref="CDD:350066"
     Site            order(599,602,619,622,627)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350066"
     Site            order(599,602,619,622)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350066"
     Region          792..898
                     /region_name="PH3_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 3; cd13256"
                     /db_xref="CDD:270076"
     Region          911..999
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1004..1182
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1040,1079,1083,1152,1155..1156,1172)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1040
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1217..1309
                     /region_name="RA_ARAP1"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 1 (ARAP1); cd17226"
                     /db_xref="CDD:340746"
     Region          1309..1447
                     /region_name="PH5_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 5; cd13259"
                     /db_xref="CDD:270079"
     CDS             1..1497
                     /gene="ARAP1"
                     /coded_by="XM_041469543.1:174..4667"
                     /db_xref="GeneID:121354722"
ORIGIN      
        1 meeegslpva awlsafhldq yvenfqqsgl wsvwdcralt deglirlgvl lpghrrrill
       61 glqkafaevp lpagthqlpa akpvpmkrhi frlntatgpe qleprglpep ggtpllepdr
      121 gasftplppp ipprvgcrpp lkfspsqlgd spephpascs hlpaledpsp palgekppad
      181 srarlplppl pakrhqletk cqslkspplp drppvlppra vsqrsipvke evpiperapg
      241 vtlpsqlppp rtkapaplpp plpckatlpf vpefddsdye dsaweeelar ptgemakeda
      301 eprmgrprsv rfnslfsede fgedhpsasp asggsswsdr apslhppapd afpgsspgtl
      361 sdsmegtaat sllsptirag wldknppqgs yiyqkrwvkl dtdylryfds ekdtyskrli
      421 pvssisrvss vgdqkfevvt nnrnfvfrae ndadrnewir tlqqiaeerk skagvrtsms
      481 laadsatela dksgflelrg fkhklfvvva gdkvflykna edyrlgigit yiemnvgnvk
      541 evdrrgfdlt tpyrifsfsa dseqekeewv eamqqsitea lsnsevaeri wavesnrfca
      601 dcgspkpdwa sinlcvvick rcagehrglg pgitkvrslk mdrkvwteel ielfqqfgni
      661 manqfwaanv ppseaispts gsqerrrfli akyregkyrq yhplfgnqee ldralcaavt
      721 tsdlaetqal lfcgasvtcd tgdprcptpl alaersgqrl qmefllhnkt sepprlemvc
      781 seekpysvhl psithngfly ktpsmvkpis erkgpeefsr rwctlqdgvl syyendrntv
      841 pngeirveei vclvnnplha hgiestfevy teadrlylfg lespdsarew iksiaksfvh
      901 pcaeellald ferlgrlhyk ggltlehaqe gwfalvgstl hvcsedghrq eplqlrklqe
      961 lsiqgdhevl vlverrrtly iqgerkldfl gwvhaiqkaa sssgdtlseq qltesdvpll
     1021 vdrcidyitq cgltsegiyr ksgqnsktts llevlhrdar cvclkegehq vddvantlkr
     1081 ffrdlgdglf trqwaphwlw ataledegak vgeyrqllaa lppvnratlk alinhlfrvq
     1141 cfsgenqmnt hnlaivfgpt lfqtdgkdyk agrvvedlis hyveifnvnd remkkqqdei
     1201 taimkmreas ssgtqqagdf ictvyleekk teteqhvkip atmtaeeltf eildrrkivm
     1261 kekdywscfe vnereeaerp lhysekvlpi lhclgtesyl vvkkqmsmen mliylasrvg
     1321 dckhgmmkfr eernllglgl stgfhdryfi lnqswlrlyk evrslrqrsp plesshkpek
     1381 ewpvrnlkvy lgvkkklrpp tcwgftvfye nekhekqqwy lccdtqadlr ewfatflqvq
     1441 nggalwpser prmrvarpqq darlgnisli plrgnesemr nsvaafatdp ltllrnv
//
LOCUS       XP_041325478            1497 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325478
VERSION     XP_041325478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1497
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=168991
     Region          7..66
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          <70..253
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          377..469
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          488..574
                     /region_name="PH2_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 2; cd13254"
                     /db_xref="CDD:270074"
     Region          584..699
                     /region_name="ArfGap_ARAP"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing proteins; cd08837"
                     /db_xref="CDD:350066"
     Site            order(599,602,619,622,627)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350066"
     Site            order(599,602,619,622)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350066"
     Region          792..898
                     /region_name="PH3_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 3; cd13256"
                     /db_xref="CDD:270076"
     Region          911..999
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1004..1182
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1040,1079,1083,1152,1155..1156,1172)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1040
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1217..1309
                     /region_name="RA_ARAP1"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 1 (ARAP1); cd17226"
                     /db_xref="CDD:340746"
     Region          1309..1447
                     /region_name="PH5_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 5; cd13259"
                     /db_xref="CDD:270079"
     CDS             1..1497
                     /gene="ARAP1"
                     /coded_by="XM_041469544.1:174..4667"
                     /db_xref="GeneID:121354722"
ORIGIN      
        1 meeegslpva awlsafhldq yvenfqqsgl wsvwdcralt deglirlgvl lpghrrrill
       61 glqkafaevp lpagthqlpa akpvpmkrhi frlntatgpe qleprglpep ggtpllepdr
      121 gasftplppp ipprvgcrpp lkfspsqlgd spephpascs hlpaledpsp palgekppad
      181 srarlplppl pakrhqletk cqslkspplp drppvlppra vsqrsipvke evpiperapg
      241 vtlpsqlppp rtkapaplpp plpckatlpf vpefddsdye dsaweeelar ptgemakeda
      301 eprmgrprsv rfnslfsede fgedhpsasp asggsswsdr apslhppapd afpgsspgtl
      361 sdsmegtaat sllsptirag wldknppqgs yiyqkrwvkl dtdylryfds ekdtyskrli
      421 pvssisrvss vgdqkfevvt nnrnfvfrae ndadrnewir tlqqiaeerk skagvrtsms
      481 laadsatela dksgflelrg fkhklfvvva gdkvflykna edyrlgigit yiemnvgnvk
      541 evdrrgfdlt tpyrifsfsa dseqekeewv eamqqsitea lsnsevaeri wavesnrfca
      601 dcgspkpdwa sinlcvvick rcagehrglg pgitkvrslk mdrkvwteel ielfqqfgni
      661 manqfwaanv ppseaispts gsqerrrfli akyregkyrq yhplfgnqee ldralcaavt
      721 tsdlaetqal lfcgasvtcd tgdprcptpl alaersgqrl qmefllhnkt sepprlemvc
      781 seekpysvhl psithngfly ktpsmvkpis erkgpeefsr rwctlqdgvl syyendrntv
      841 pngeirveei vclvnnplha hgiestfevy teadrlylfg lespdsarew iksiaksfvh
      901 pcaeellald ferlgrlhyk ggltlehaqe gwfalvgstl hvcsedghrq eplqlrklqe
      961 lsiqgdhevl vlverrrtly iqgerkldfl gwvhaiqkaa sssgdtlseq qltesdvpll
     1021 vdrcidyitq cgltsegiyr ksgqnsktts llevlhrdar cvclkegehq vddvantlkr
     1081 ffrdlgdglf trqwaphwlw ataledegak vgeyrqllaa lppvnratlk alinhlfrvq
     1141 cfsgenqmnt hnlaivfgpt lfqtdgkdyk agrvvedlis hyveifnvnd remkkqqdei
     1201 taimkmreas ssgtqqagdf ictvyleekk teteqhvkip atmtaeeltf eildrrkivm
     1261 kekdywscfe vnereeaerp lhysekvlpi lhclgtesyl vvkkqmsmen mliylasrvg
     1321 dckhgmmkfr eernllglgl stgfhdryfi lnqswlrlyk evrslrqrsp plesshkpek
     1381 ewpvrnlkvy lgvkkklrpp tcwgftvfye nekhekqqwy lccdtqadlr ewfatflqvq
     1441 nggalwpser prmrvarpqq darlgnisli plrgnesemr nsvaafatdp ltllrnv
//
LOCUS       XP_041325479            1486 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325479
VERSION     XP_041325479.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469545.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1486
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=167739
     Region          7..66
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          <70..253
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          377..469
                     /region_name="PH1_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 1; cd13253"
                     /db_xref="CDD:270073"
     Region          488..574
                     /region_name="PH2_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 2; cd13254"
                     /db_xref="CDD:270074"
     Region          584..699
                     /region_name="ArfGap_ARAP"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing proteins; cd08837"
                     /db_xref="CDD:350066"
     Site            order(599,602,619,622,627)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350066"
     Site            order(599,602,619,622)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350066"
     Region          792..898
                     /region_name="PH3_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 3; cd13256"
                     /db_xref="CDD:270076"
     Region          911..999
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          1004..1182
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(1040,1079,1083,1152,1155..1156,1172)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            1040
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          1217..1309
                     /region_name="RA_ARAP1"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 1 (ARAP1); cd17226"
                     /db_xref="CDD:340746"
     Region          1309..1436
                     /region_name="PH5_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 5; cd13259"
                     /db_xref="CDD:270079"
     CDS             1..1486
                     /gene="ARAP1"
                     /coded_by="XM_041469545.1:174..4634"
                     /db_xref="GeneID:121354722"
ORIGIN      
        1 meeegslpva awlsafhldq yvenfqqsgl wsvwdcralt deglirlgvl lpghrrrill
       61 glqkafaevp lpagthqlpa akpvpmkrhi frlntatgpe qleprglpep ggtpllepdr
      121 gasftplppp ipprvgcrpp lkfspsqlgd spephpascs hlpaledpsp palgekppad
      181 srarlplppl pakrhqletk cqslkspplp drppvlppra vsqrsipvke evpiperapg
      241 vtlpsqlppp rtkapaplpp plpckatlpf vpefddsdye dsaweeelar ptgemakeda
      301 eprmgrprsv rfnslfsede fgedhpsasp asggsswsdr apslhppapd afpgsspgtl
      361 sdsmegtaat sllsptirag wldknppqgs yiyqkrwvkl dtdylryfds ekdtyskrli
      421 pvssisrvss vgdqkfevvt nnrnfvfrae ndadrnewir tlqqiaeerk skagvrtsms
      481 laadsatela dksgflelrg fkhklfvvva gdkvflykna edyrlgigit yiemnvgnvk
      541 evdrrgfdlt tpyrifsfsa dseqekeewv eamqqsitea lsnsevaeri wavesnrfca
      601 dcgspkpdwa sinlcvvick rcagehrglg pgitkvrslk mdrkvwteel ielfqqfgni
      661 manqfwaanv ppseaispts gsqerrrfli akyregkyrq yhplfgnqee ldralcaavt
      721 tsdlaetqal lfcgasvtcd tgdprcptpl alaersgqrl qmefllhnkt sepprlemvc
      781 seekpysvhl psithngfly ktpsmvkpis erkgpeefsr rwctlqdgvl syyendrntv
      841 pngeirveei vclvnnplha hgiestfevy teadrlylfg lespdsarew iksiaksfvh
      901 pcaeellald ferlgrlhyk ggltlehaqe gwfalvgstl hvcsedghrq eplqlrklqe
      961 lsiqgdhevl vlverrrtly iqgerkldfl gwvhaiqkaa sssgdtlseq qltesdvpll
     1021 vdrcidyitq cgltsegiyr ksgqnsktts llevlhrdar cvclkegehq vddvantlkr
     1081 ffrdlgdglf trqwaphwlw ataledegak vgeyrqllaa lppvnratlk alinhlfrvq
     1141 cfsgenqmnt hnlaivfgpt lfqtdgkdyk agrvvedlis hyveifnvnd remkkqqdei
     1201 taimkmreas ssgtqqagdf ictvyleekk teteqhvkip atmtaeeltf eildrrkivm
     1261 kekdywscfe vnereeaerp lhysekvlpi lhclgtesyl vvkkqmsmen mliylasrvg
     1321 dckhgmmkfr eernllglgl stgfhdryfi lnqswlrlyk evrshkpeke wpvrnlkvyl
     1381 gvkkklrppt cwgftvfyen ekhekqqwyl ccdtqadlre wfatflqvqn ggalwpserp
     1441 rmrvarpqqd arlgnislip lrgnesemrn svaafatdpl tllrnv
//
LOCUS       XP_041325480            1203 aa            linear   VRT 06-MAY-2021
DEFINITION  arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing
            protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325480
VERSION     XP_041325480.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469546.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1203
                     /product="arf-GAP with Rho-GAP domain, ANK repeat and PH
                     domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=137042
     Region          83..175
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          194..280
                     /region_name="PH2_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 2; cd13254"
                     /db_xref="CDD:270074"
     Region          290..405
                     /region_name="ArfGap_ARAP"
                     /note="ArfGap with Rho-Gap domain, ANK repeat and PH
                     domain-containing proteins; cd08837"
                     /db_xref="CDD:350066"
     Site            order(305,308,325,328,333)
                     /site_type="other"
                     /note="arginine finger"
                     /db_xref="CDD:350066"
     Site            order(305,308,325,328)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:350066"
     Region          498..604
                     /region_name="PH3_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 3; cd13256"
                     /db_xref="CDD:270076"
     Region          617..705
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          710..888
                     /region_name="RhoGAP_ARAP"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in ARAPs. ARAPs (also known
                     as centaurin deltas) contain, besides the RhoGAP domain,
                     an Arf GAP, ankyrin repeat ras-associating, and PH
                     domains. Since their ArfGAP activity...; cd04385"
                     /db_xref="CDD:239850"
     Site            order(746,785,789,858,861..862,878)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239850"
     Site            746
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239850"
     Region          923..1015
                     /region_name="RA_ARAP1"
                     /note="Ras-associating (RA) domain found in Arf-GAP with
                     Rho-GAP domain, ANK repeat and PH domain-containing
                     protein 1 (ARAP1); cd17226"
                     /db_xref="CDD:340746"
     Region          1015..1153
                     /region_name="PH5_ARAP"
                     /note="ArfGAP with RhoGAP domain, ankyrin repeat and PH
                     domain Pleckstrin homology (PH) domain, repeat 5; cd13259"
                     /db_xref="CDD:270079"
     CDS             1..1203
                     /gene="ARAP1"
                     /coded_by="XM_041469546.1:266..3877"
                     /db_xref="GeneID:121354722"
ORIGIN      
        1 makedaeprm grprsvrfns lfsedefged hpsaspasgg sswsdrapsl hppapdafpg
       61 sspgtlsdsm egtaatslls ptiragwldk nppqgsyiyq krwvkldtdy lryfdsekdt
      121 yskrlipvss isrvssvgdq kfevvtnnrn fvfraendad rnewirtlqq iaeerkskag
      181 vrtsmslaad sateladksg flelrgfkhk lfvvvagdkv flyknaedyr lgigityiem
      241 nvgnvkevdr rgfdlttpyr ifsfsadseq ekeewveamq qsitealsns evaeriwave
      301 snrfcadcgs pkpdwasinl cvvickrcag ehrglgpgit kvrslkmdrk vwteelielf
      361 qqfgnimanq fwaanvppse aisptsgsqe rrrfliakyr egkyrqyhpl fgnqeeldra
      421 lcaavttsdl aetqallfcg asvtcdtgdp rcptplalae rsgqrlqmef llhnktsepp
      481 rlemvcseek pysvhlpsit hngflyktps mvkpiserkg peefsrrwct lqdgvlsyye
      541 ndrntvpnge irveeivclv nnplhahgie stfevytead rlylfglesp dsarewiksi
      601 aksfvhpcae ellaldferl grlhykgglt lehaqegwfa lvgstlhvcs edghrqeplq
      661 lrklqelsiq gdhevlvlve rrrtlyiqge rkldflgwvh aiqkaasssg dtlseqqlte
      721 sdvpllvdrc idyitqcglt segiyrksgq nskttsllev lhrdarcvcl kegehqvddv
      781 antlkrffrd lgdglftrqw aphwlwatal edegakvgey rqllaalppv nratlkalin
      841 hlfrvqcfsg enqmnthnla ivfgptlfqt dgkdykagrv vedlishyve ifnvndremk
      901 kqqdeitaim kmreasssgt qqagdfictv yleekktete qhvkipatmt aeeltfeild
      961 rrkivmkekd ywscfevner eeaerplhys ekvlpilhcl gtesylvvkk qmsmenmliy
     1021 lasrvgdckh gmmkfreern llglglstgf hdryfilnqs wlrlykevrs lrqrspples
     1081 shkpekewpv rnlkvylgvk kklrpptcwg ftvfyenekh ekqqwylccd tqadlrewfa
     1141 tflqvqngga lwpserprmr varpqqdarl gnisliplrg nesemrnsva afatdpltll
     1201 rnv
//
LOCUS       XP_041325481             418 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-arrestin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325481
VERSION     XP_041325481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="beta-arrestin-1 isoform X1"
                     /calculated_mol_wt=47020
     Region          18..174
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          193..356
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..418
                     /gene="LOC121354724"
                     /coded_by="XM_041469547.1:401..1657"
                     /db_xref="GeneID:121354724"
ORIGIN      
        1 mgdkgtrvfk kaspngkltv ylgkrdfvdh idvvdpvdgv vlvdpeylke rkvfvtltca
       61 frygredldv lgltfrkdlf vansqafppv pedkkpltrl qerlikklge haypftfeip
      121 pnlpcsvtlq pgpedtgkac gvdyevkafc aenleekihk rnsvrlvirk vqyaperpgp
      181 qpmaettrqf lmsdkplhle asldkeiyyh gepisvnvhv tnntnktvkk ikisvrqyad
      241 iclfntaqyk cpvavedadd mvapsstfck vytltpflan nrekrglald gklkhedtnl
      301 asstllrdga nkeilgiivs ykvkvklvvs rggllgdlas sdvavelpft lmhpkpreep
      361 vhrdipenea pidtnlield tndddivfed farqrlkgmk ddkedeeert nspqlndr
//
LOCUS       XP_041325483             410 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-arrestin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325483
VERSION     XP_041325483.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469549.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="beta-arrestin-1 isoform X2"
                     /calculated_mol_wt=46263
     Region          18..174
                     /region_name="Arrestin_N"
                     /note="Arrestin (or S-antigen), N-terminal domain;
                     cl22903"
                     /db_xref="CDD:451447"
     Region          193..348
                     /region_name="Arrestin_C"
                     /note="Arrestin (or S-antigen), C-terminal domain;
                     smart01017"
                     /db_xref="CDD:214976"
     CDS             1..410
                     /gene="LOC121354724"
                     /coded_by="XM_041469549.1:402..1634"
                     /db_xref="GeneID:121354724"
ORIGIN      
        1 mgdkgtrvfk kaspngkltv ylgkrdfvdh idvvdpvdgv vlvdpeylke rkvfvtltca
       61 frygredldv lgltfrkdlf vansqafppv pedkkpltrl qerlikklge haypftfeip
      121 pnlpcsvtlq pgpedtgkac gvdyevkafc aenleekihk rnsvrlvirk vqyaperpgp
      181 qpmaettrqf lmsdkplhle asldkeiyyh gepisvnvhv tnntnktvkk ikisvrqyad
      241 iclfntaqyk cpvavedadd mvapsstfck vytltpflan nrekrglald gklkhedtnl
      301 asstllrdga nkeilgiivs ykvkvklvvs rggdvavelp ftlmhpkpre epvhrdipen
      361 eapidtnlie ldtndddivf edfarqrlkg mkddkedeee rtnspqlndr
//
LOCUS       XP_041325484             769 aa            linear   VRT 06-MAY-2021
DEFINITION  caseinolytic peptidase B protein homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041325484
VERSION     XP_041325484.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469550.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="caseinolytic peptidase B protein homolog"
                     /calculated_mol_wt=84325
     Region          <209..382
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(226,230..231,234..236,238..239,243,246,255,257,259,
                     263..264,267..269,271..272,276,279,288,326,328,332..333,
                     336..338,340..341,345,348)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          226..255
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          257..288
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          326..351
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          <400..716
                     /region_name="ClpA"
                     /note="ATP-dependent Clp protease, ATP-binding subunit
                     ClpA [Posttranslational modification, protein turnover,
                     chaperones]; COG0542"
                     /db_xref="CDD:440308"
     CDS             1..769
                     /gene="CLPB"
                     /coded_by="XM_041469550.1:72..2381"
                     /db_xref="GeneID:121354725"
ORIGIN      
        1 mlaslafcpl pqglarllra rpwwspsrat ygtaaaaava egagarlrll pvlaargrrg
       61 lgpapsarls wrlaacrgrq rglggealaa gpvpgdspva vlpgptlprg sgprgsplvn
      121 gpglkgttta eslglpvpgl galhtpqppa tglastgclv patssslmas lreptpwpsg
      181 aeqhcchagd pgghqsgags cspgaglpal iaalaycylr drlskedall eaarindvse
      241 vkrlleegad vntrhklgwt almvaaisrh ssvvkallta nadpnlgddf ssvyeiakek
      301 glhslevlvt reddfnnrln iranfkgcta lhyavladdy ltvkllldag anplqknemg
      361 htpldyareg evmnllrase akfqeeqrrr eveerrrfpl eqrlkehiig qenaiatvga
      421 airrkengwy deehplvflf lgssgigkte lakqtakyih kdikkgfirl dmsefqerhe
      481 vakfigsppg yvgheeggql tkklrqcpna vvlfdevdka hpdvltimlq lfdegrltdg
      541 kgktidckda ifimtsnvas deiaqhalql rqeamemskk riaenledvq mtdkitiskq
      601 fkekvirpil kahfrrdefl grineivyfl pfchseliql vnkelnywak kakarhnitl
      661 lwdrevmdvl adgynlhyga rsikheverr vvnqlaaaye qdllpqgctl riivedsnkq
      721 llkttegsss stekskvptl rleivekdrk arkleiqapl npknityfl
//
LOCUS       XP_041325485             288 aa            linear   VRT 06-MAY-2021
DEFINITION  folate receptor alpha-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325485
VERSION     XP_041325485.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469551.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="folate receptor alpha-like isoform X1"
                     /calculated_mol_wt=31876
     Region          69..244
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..288
                     /gene="LOC121354726"
                     /coded_by="XM_041469551.1:108..974"
                     /db_xref="GeneID:121354726"
ORIGIN      
        1 mcaslgvfvt nggghglcct ttfemscarp tapgaqlppr amaavlallv awpaaatavr
       61 vtqdsllnvc mdakhhktep gpegqlygqc vlwkdnacct antsleahrd qsylynfnwd
      121 hcgampekck rhfiqdtcly ecspnlgpwi dqadtswrke riqdvplcqe dceqwwedcq
      181 davtckvnwh kgwnwttgtn qcpkgamcqk fkfvfptaaa lceqvwsgsy rytshhrgsg
      241 hciqmwfdpm qgnpnvavaq yyahgdappn sllsillsll pltllall
//
LOCUS       XP_041325486             281 aa            linear   VRT 06-MAY-2021
DEFINITION  folate receptor alpha-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325486
VERSION     XP_041325486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="folate receptor alpha-like isoform X2"
                     /calculated_mol_wt=31130
     Region          62..237
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..281
                     /gene="LOC121354726"
                     /coded_by="XM_041469552.1:1053..1898"
                     /db_xref="GeneID:121354726"
ORIGIN      
        1 mcccastctv gdfvpavtas lsaavltccr pgramaavla llvawpaaat avrvtqdsll
       61 nvcmdakhhk tepgpegqly gqcvlwkdna cctantslea hrdqsylynf nwdhcgampe
      121 kckrhfiqdt clyecspnlg pwidqadtsw rkeriqdvpl cqedceqwwe dcqdavtckv
      181 nwhkgwnwtt gtnqcpkgam cqkfkfvfpt aaalceqvws gsyrytshhr gsghciqmwf
      241 dpmqgnpnva vaqyyahgda ppnsllsill sllpltllal l
//
LOCUS       XP_041325487             264 aa            linear   VRT 06-MAY-2021
DEFINITION  folate receptor alpha-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325487
VERSION     XP_041325487.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469553.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..264
                     /product="folate receptor alpha-like isoform X3"
                     /calculated_mol_wt=29488
     Region          45..220
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..264
                     /gene="LOC121354726"
                     /coded_by="XM_041469553.1:934..1728"
                     /db_xref="GeneID:121354726"
ORIGIN      
        1 mscarptapg aqlppramaa vlallvawpa aatavrvtqd sllnvcmdak hhktepgpeg
       61 qlygqcvlwk dnacctants leahrdqsyl ynfnwdhcga mpekckrhfi qdtclyecsp
      121 nlgpwidqad tswrkeriqd vplcqedceq wwedcqdavt ckvnwhkgwn wttgtnqcpk
      181 gamcqkfkfv fptaaalceq vwsgsyryts hhrgsghciq mwfdpmqgnp nvavaqyyah
      241 gdappnslls illsllpltl lall
//
LOCUS       XP_041325488             201 aa            linear   VRT 06-MAY-2021
DEFINITION  folate receptor alpha-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325488
VERSION     XP_041325488.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469554.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="folate receptor alpha-like isoform X4"
                     /calculated_mol_wt=22292
     Region          69..>200
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..201
                     /gene="LOC121354726"
                     /coded_by="XM_041469554.1:108..713"
                     /db_xref="GeneID:121354726"
ORIGIN      
        1 mcaslgvfvt nggghglcct ttfemscarp tapgaqlppr amaavlallv awpaaatavr
       61 vtqdsllnvc mdakhhktep gpegqlygqc vlwkdnacct antsleahrd qsylynfnwd
      121 hcgampekck rhfiqdtcly ecspnlgpwi dqadtswrke riqdvplcqe dceqwwedcq
      181 davtckvnwh kgwnwttaip v
//
LOCUS       XP_041325489             133 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 15 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325489
VERSION     XP_041325489.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469555.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..133
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..133
                     /product="anaphase-promoting complex subunit 15 isoform
                     X1"
                     /calculated_mol_wt=15057
     Region          <41..>74
                     /region_name="ANAPC15"
                     /note="Anaphase-promoting complex subunit 15; pfam15243"
                     /db_xref="CDD:464583"
     CDS             1..133
                     /gene="ANAPC15"
                     /coded_by="XM_041469555.1:16..417"
                     /db_xref="GeneID:121354727"
ORIGIN      
        1 mrypgahger sggghrerrs rngtrrsreg hrrgpagilg eqqrgawgst selqsiaekd
       61 nnlvpigkpa sehydeeeee ddeddedsee dseddedmqd mdemndynes pddgeinevd
      121 megteqdqdq wmi
//
LOCUS       XP_041325490             121 aa            linear   VRT 06-MAY-2021
DEFINITION  anaphase-promoting complex subunit 15 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325490
VERSION     XP_041325490.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469556.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..121
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..121
                     /product="anaphase-promoting complex subunit 15 isoform
                     X2"
                     /calculated_mol_wt=14117
     Region          2..>62
                     /region_name="ANAPC15"
                     /note="Anaphase-promoting complex subunit 15; pfam15243"
                     /db_xref="CDD:464583"
     CDS             1..121
                     /gene="ANAPC15"
                     /coded_by="XM_041469556.1:82..447"
                     /db_xref="GeneID:121354727"
ORIGIN      
        1 mstlfpsllp rlteslwfnl drpcvdetel qqqeqqhqaw lqsiaekdnn lvpigkpase
       61 hydeeeeedd eddedseeds eddedmqdmd emndynespd dgeinevdme gteqdqdqwm
      121 i
//
LOCUS       XP_041325491             905 aa            linear   VRT 06-MAY-2021
DEFINITION  transforming growth factor beta activator LRRC32-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325491
VERSION     XP_041325491.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469557.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..905
                     /product="transforming growth factor beta activator
                     LRRC32-like"
                     /calculated_mol_wt=102290
     Region          60..>286
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          61..84
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          85..108
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          109..135
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          136..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          185..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..229
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          230..253
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          302..656
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          328..351
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          352..375
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          376..398
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          399..422
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          423..462
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          463..485
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          486..510
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <509..825
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          511..536
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          537..596
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          597..619
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          620..643
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          684..706
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          707..728
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          732..754
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          755..776
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          777..800
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..905
                     /gene="LOC121354730"
                     /coded_by="XM_041469557.1:343..3060"
                     /db_xref="GeneID:121354730"
ORIGIN      
        1 mqetletram klyiifflav vnketsnyql pegtsceman sqafchnkhl hqiphelypn
       61 vnkidlsgnl iqsipemsss fytflqcldl ssnqisfitp gvfahmksll einlannhly
      121 elaqngtegi gllpkvevld lshnslyngm aeyfikeapa lqylsladns iimisqkmfq
      181 gspnlveidl qrniimeiee gafetlvsls klnlsknsit cisdfnlrql eildlsrnsi
      241 etfhtiksdd eyslrcldls enklfhfpvf pqvnklvtln lsknliqlta esphhkmdyv
      301 knewlnasfh lfdqkqsrnk sslylsqlvy ldlsyneiks ipdeffetml slhtlnlskn
      361 clqsfavsyd salmsltvld lsynalqtll ldagalsnlk elyvqnnylq tlqfdifsnl
      421 pslrllnlqs nnislcsmys glakqrlage ksgcvsfvns palqylylad nmlsilpays
      481 fyktslvvld lsmnaglnie lkalsgleks leclylygns lidlnidlpc fshlkhlnls
      541 enqlnwlpkw gsdsplevld lrnnrfstlq nsnilalens lkiqsfavsy dsalmsltvl
      601 dlsynalqtl lldagalsnl kelyvqnnyl qtlqfdifsn lpslrllnlq snnislcsmy
      661 sglakqrlag eksgcvsfvn spalqylyla dnmlsilpay sfyktslvvl dlsmnaglni
      721 elkalsglek sleclylygn slidlnidlp cfshlkhlnl senqlnwlpk wgsdsplevl
      781 dlrnnrfstl qnsnilalen slknlyltgn pldccgniwl ssmiqsknvq ipnvehltcq
      841 htrnfgyqde mhiknirped cekedlkkin fltiltfvlv lsviiigags ffcfrrqnft
      901 hqfka
//
LOCUS       XP_041325492             277 aa            linear   VRT 06-MAY-2021
DEFINITION  START domain-containing protein 10 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325492
VERSION     XP_041325492.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469558.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="START domain-containing protein 10 isoform X1"
                     /calculated_mol_wt=31466
     Region          11..233
                     /region_name="START_STARD10-like"
                     /note="Lipid-binding START domain of mammalian STARD10 and
                     related proteins; cd08871"
                     /db_xref="CDD:176880"
     Site            order(38..39,46,60,62,74,78,84,87..88,90..91,110,112..115,
                     117,120,122,124,139,156,158..161,163,175,177,179,181,183,
                     185,192,194..196,198..200,203..204,207)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176880"
     CDS             1..277
                     /gene="STARD10"
                     /coded_by="XM_041469558.1:89..922"
                     /db_xref="GeneID:121354731"
ORIGIN      
        1 msghdggmss rdsvqipddr dfgafraqce sergwsltys kggvgvwvql leperalhki
       61 kcrmecrdvp aetlydvlhd ieyrkkwdtn vietfdigrl tansdvgyya wrcpkplknr
      121 dvvtlrswlp mgsdyiimny svkhpkyppr kdmvravsiq tgyliegtga ksctitylaq
      181 vdpkgslpkw vvnkssqfla pkamkkmyka clkypewkqk hdphfkpwlf peqsrlpala
      241 lselslqhad slenidessl aeskedrgeg sdedslt
//
LOCUS       XP_041325493             259 aa            linear   VRT 06-MAY-2021
DEFINITION  START domain-containing protein 10 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325493
VERSION     XP_041325493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469559.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="START domain-containing protein 10 isoform X2"
                     /calculated_mol_wt=29082
     Region          <44..215
                     /region_name="START_STARD10-like"
                     /note="Lipid-binding START domain of mammalian STARD10 and
                     related proteins; cd08871"
                     /db_xref="CDD:176880"
     Site            order(44,56,60,66,69..70,72..73,92,94..97,99,102,104,106,
                     121,138,140..143,145,157,159,161,163,165,167,174,176..178,
                     180..182,185..186,189)
                     /site_type="other"
                     /note="putative lipid binding site [chemical binding]"
                     /db_xref="CDD:176880"
     CDS             1..259
                     /gene="STARD10"
                     /coded_by="XM_041469559.1:138..917"
                     /db_xref="GeneID:121354731"
ORIGIN      
        1 mrvgarleph lqqgrggrlg aaagararpp qdqgeiscpa hpgarmecrd vpaetlydvl
       61 hdieyrkkwd tnvietfdig rltansdvgy yawrcpkplk nrdvvtlrsw lpmgsdyiim
      121 nysvkhpkyp prkdmvravs iqtgyliegt gaksctityl aqvdpkgslp kwvvnkssqf
      181 lapkamkkmy kaclkypewk qkhdphfkpw lfpeqsrlpa lalselslqh adslenides
      241 slaeskedrg egsdedslt
//
LOCUS       XP_041325495             380 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 73 [Pyrgilauda ruficollis].
ACCESSION   XP_041325495
VERSION     XP_041325495.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469561.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..380
                     /product="WD repeat-containing protein 73"
                     /calculated_mol_wt=41140
     Region          85..371
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          86..129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(100,105,111..112,137,145..146,157,162..163,178,197,
                     205,208,237..238,250,254,260..261,280..281,300,304,
                     310..311,330..331,360,364,370..371)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          135..180
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          184..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..277
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          285..329
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..380
                     /gene="WDR73"
                     /coded_by="XM_041469561.1:14..1156"
                     /db_xref="GeneID:121354732"
ORIGIN      
        1 meaadewllq slrlyrdlht felqaptrli ewargdrvcv agygqsdgne ilqlipppal
       61 ltketqglcp erdfkvecgg fserpvyslk yvpdtsllvt sgppdgslqv wqvsaedsdv
      121 iksvstiate hgtgqswaki atisarapwv lhgsrldrvq itevesrknv ytasiqasrg
      181 seelsnlafl dcntlllcca tgrlcladir qpqslteamp vpsapcteqw cmgtrhgaqg
      241 lepssqpvar lssrgvltlt dlrktsefla lakarvpspg sgaeflcvsw apalegylai
      301 sgfdgtvhvy dtqswdssgr eaepifvhkg htfggaggsr dpplvtvhtw hlqkprtlls
      361 aasdgslhvw dwvqpcgkcg
//
LOCUS       XP_041325496             940 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-dependent 3',5'-cyclic phosphodiesterase isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325496
VERSION     XP_041325496.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469562.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..940
                     /product="cGMP-dependent 3',5'-cyclic phosphodiesterase
                     isoform X1"
                     /calculated_mol_wt=105565
     Region          232..379
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          401..552
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          649..882
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..940
                     /gene="PDE2A"
                     /coded_by="XM_041469562.1:1..2823"
                     /db_xref="GeneID:121354733"
ORIGIN      
        1 mgwtgreggp trsrgdphal rqprqepgra mgtlqdtdal lslgaaldat tlrdalrhal
       61 vtllpavehv yiylldgdtr llcddpphel ppsgklrdav qkqkrlecgg llpselpgrh
      121 lgplaaplap gtqvliiplv dknsgavvcv ilvhcgqlsd sdeqnlcale rhtlvafrrl
      181 qalqklqpwp qvslstsssq tslakpekap essysdldck ilqlcgelyd ldaaslqlkv
      241 inylkqetqs lccclllvse dnhqlfcqvv gdrvldeeis fsltfgrlgq vvedkkpitl
      301 kdiseeehkq lssmlgcevt smlcvpvisr atsqvvalac afnklsgesy tdtdehkiqh
      361 cfcytstvlt stlafqkeqk lkcecqallq vaknlfthld dvsvllqeii tearnlsnae
      421 icsvflldrl shelvakvfd ggvvddesye iripadqgia ghvattgkil nikdayshpl
      481 fyrgvddstg frtrnilcfp iknesqevig vaelvnking pwfskfdedl atafsiycgi
      541 siahsllykk vneaqyrshl anemmmyhmk vsddeytkll segiqpvsti dpnfasftyt
      601 prslpeddts mailsmlqdm nfinnykmdr qtltrfclmv kkgyrdppyh nwmhafsvsh
      661 fcyllyknle lvnylediei falfiscmch dldhrgtnns fqvasksvla alyssegsvm
      721 erhhfaqaia ilnsqgcnif dhfsrkdyqr mldlmrdiil atdlahhlri fkdlqkmaev
      781 gydpknkqhr slllcllmts cdlsdqtkgw kttrkiaeli ykeffsqgdl ekamgnsple
      841 mmdrekayip elqisfmehi ampiykllqd lfpkaaelye rvasnreqwt kvshkftirg
      901 lpsnnsldfl deeydpqapd pqlngclepe vgqlpeagae
//
LOCUS       XP_041325497             934 aa            linear   VRT 06-MAY-2021
DEFINITION  cGMP-dependent 3',5'-cyclic phosphodiesterase isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325497
VERSION     XP_041325497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469563.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..934
                     /product="cGMP-dependent 3',5'-cyclic phosphodiesterase
                     isoform X2"
                     /calculated_mol_wt=104888
     Region          226..373
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          395..546
                     /region_name="GAF"
                     /note="Domain present in phytochromes and cGMP-specific
                     phosphodiesterases; smart00065"
                     /db_xref="CDD:214500"
     Region          643..876
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..934
                     /gene="PDE2A"
                     /coded_by="XM_041469563.1:39..2843"
                     /db_xref="GeneID:121354733"
ORIGIN      
        1 mvprlliall rffsrgflra gdaapgpeal qdallslgaa ldattlrdal rhalvtllpa
       61 vehvyiylld gdtrllcddp phelppsgkl rdavqkqkrl ecggllpsel pgrhlgplaa
      121 plapgtqvli iplvdknsga vvcvilvhcg qlsdsdeqnl calerhtlva frrlqalqkl
      181 qpwpqvslst sssqtslakp ekapessysd ldckilqlcg elydldaasl qlkvinylkq
      241 etqslcccll lvsednhqlf cqvvgdrvld eeisfsltfg rlgqvvedkk pitlkdisee
      301 ehkqlssmlg cevtsmlcvp visratsqvv alacafnkls gesytdtdeh kiqhcfcyts
      361 tvltstlafq keqklkcecq allqvaknlf thlddvsvll qeiitearnl snaeicsvfl
      421 ldrlshelva kvfdggvvdd esyeiripad qgiaghvatt gkilnikday shplfyrgvd
      481 dstgfrtrni lcfpiknesq evigvaelvn kingpwfskf dedlatafsi ycgisiahsl
      541 lykkvneaqy rshlanemmm yhmkvsddey tkllsegiqp vstidpnfas ftytprslpe
      601 ddtsmailsm lqdmnfinny kmdrqtltrf clmvkkgyrd ppyhnwmhaf svshfcylly
      661 knlelvnyle dieifalfis cmchdldhrg tnnsfqvask svlaalysse gsvmerhhfa
      721 qaiailnsqg cnifdhfsrk dyqrmldlmr diilatdlah hlrifkdlqk maevgydpkn
      781 kqhrslllcl lmtscdlsdq tkgwkttrki aeliykeffs qgdlekamgn splemmdrek
      841 ayipelqisf mehiampiyk llqdlfpkaa elyervasnr eqwtkvshkf tirglpsnns
      901 ldfldeeydp qapdpqlngc lepevgqlpe agae
//
LOCUS       XP_041325498             159 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325498
VERSION     XP_041325498.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469564.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523205.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..159
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=15609
     CDS             1..159
                     /gene="LOC121354734"
                     /coded_by="XM_041469564.1:1..480"
                     /db_xref="GeneID:121354734"
ORIGIN      
        1 mrsrgwgdgt ttqngtrlgs picasvslss fprgvqsppp ksggqagana lgrapsalga
       61 grdgepehge sgaptpnpap qhkhgdpqps gnggrgnggs rvgeedttra arppgsgcgt
      121 palgspccrs qvspqpgqvp larmqvrgsm nkagvaflg
//
LOCUS       XP_041325499             299 aa            linear   VRT 06-MAY-2021
DEFINITION  oxysterol-binding protein-related protein 7-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325499
VERSION     XP_041325499.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469565.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523206.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..299
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>299
                     /product="oxysterol-binding protein-related protein
                     7-like"
     Region          1..273
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     CDS             1..299
                     /gene="LOC121354735"
                     /coded_by="XM_041469565.1:<1..>898"
                     /db_xref="GeneID:121354735"
ORIGIN      
        1 vyvaafavsa yastyyrags kpfnpvlget yecvrpdrgf rfiseqvshh ppisachaes
       61 dnfvfwqdmr wknkfwgksl eivpmgtvnv qlprtgdhye wnkvttcihn vlsgprwieh
      121 ygevlirntr dasyhckltf ckarywgaga nevqgavlsr sgtaverlag kwheglhrgp
      181 apghcvwran pmprdhersy gftqfaleln eltpelrrvl pstdtrlrpd qryleegnvp
      241 aaeaqkrqie qlqrdrrrvm eennithqar ffrsggcrgw vggmgrpsgg pegsswlrg
//
LOCUS       XP_041325500             382 aa            linear   VRT 06-MAY-2021
DEFINITION  vegetative cell wall protein gp1-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325500
VERSION     XP_041325500.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469566.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523250.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>382
                     /product="vegetative cell wall protein gp1-like"
     Region          <102..357
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..382
                     /gene="LOC121354737"
                     /coded_by="XM_041469566.1:59..>1204"
                     /db_xref="GeneID:121354737"
ORIGIN      
        1 msllsppcpi chlpapvvtf rpqlsppgpf chlhvpvvts qpqlsppcpc cplpapavts
       61 msllsppcps cyfqvlvvtf rsqlsppgln chlqvpvvts qpqlslpdpr chlrvpvvts
      121 rshlssvsfn chlpapavis mpplsppgpr chlpaptvts rpqlstpgps chlqvlfvts
      181 gsqlsppspc cqlpapavts msqlsppspc chlqapvvts rsflsppgpc cplpapavts
      241 msllspphps cyfqvlvvts rsqlsppgln chlqvpivts qpqlslpdpr chlrvpvvts
      301 rshlssvsfn chlpapavis msplsppgpr crlpapivts rsplspsfva appgshldvl
      361 lddpgvvtdg lheqnlgtrg gp
//
LOCUS       XP_041325501             159 aa            linear   VRT 06-MAY-2021
DEFINITION  hsp90 co-chaperone Cdc37-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325501
VERSION     XP_041325501.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469567.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523272.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..159
                     /product="hsp90 co-chaperone Cdc37-like"
     Region          <15..126
                     /region_name="CDC37_M"
                     /note="Cdc37 Hsp90 binding domain; smart01070"
                     /db_xref="CDD:215010"
     CDS             1..159
                     /gene="LOC121354738"
                     /coded_by="XM_041469567.1:<1..480"
                     /db_xref="GeneID:121354738"
ORIGIN      
        1 gpplstgnpr slpagmlrrw ddsqkylsdn phlvceetan ylviwcidle veekhalmeq
       61 vahqtivmqf ilelakslkv dpracfrqff tkiktadqqy legfteelea fkervrgrar
      121 arlekalrey eeeerqkrlg pggldpvdvy eslpavslg
//
LOCUS       XP_041325503             308 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 1052-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325503
VERSION     XP_041325503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469569.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..308
                     /product="olfactory receptor 1052-like"
                     /calculated_mol_wt=33616
     Region          39..303
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320539"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320539"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320539"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320539"
     Region          238..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320539"
     Region          269..294
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320539"
     CDS             1..308
                     /gene="LOC121354740"
                     /coded_by="XM_041469569.1:1..927"
                     /db_xref="GeneID:121354740"
ORIGIN      
        1 mpgsnctqan efslagfted latqvtlfll flltylvtil gnlgmitlir aspllhspmy
       61 yflgnlafvn lctstiitpr mlagvllgtk gityagcmaq iftfglflvt ecfllatmay
      121 dryvaichpl lyplvmsper csrlvtgsyl lgltngvgqt igmsslffcs sstidlffcd
      181 ismlislsts dttlsliilr tfssllgvps mlvvlvsyva iissilsiss aegkrkafst
      241 cashltalst fygalifmyl iprsdtsrgg dkwaavlytv vtpmlnpliy slrnqevkea
      301 wrrlrkik
//
LOCUS       XP_041325504             306 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 1019-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325504
VERSION     XP_041325504.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469570.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="olfactory receptor 1019-like"
                     /calculated_mol_wt=32758
     Region          13..291
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          28..52
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320530"
     Region          61..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320530"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320530"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320530"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320530"
     Region          231..253
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320530"
     Region          262..287
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320530"
     CDS             1..306
                     /gene="LOC121354741"
                     /coded_by="XM_041469570.1:19..939"
                     /db_xref="GeneID:121354741"
ORIGIN      
        1 maakgngtts ahfvllgfse qgrvqvvlfv vflvicvitl lgnvallvli rpvaqlhtpm
       61 yfflsslsfl dlccsscitp rllqdllded kpceaacltq fyfyvafatt eccllaamay
      121 drsvavcrpl lyslsvsrgi callmagscl agvtnaalht glalrlsfcg pkvighfyce
      181 gpplialsct dpalselgmf itagfslaat vlaillsytf ilaavgkrka fsasvsqlaa
      241 valfygslvs vyaqsssrss peqdkvasvf ytmvmtmlnp ficslrnqev kaglwrlmgr
      301 khsaek
//
LOCUS       XP_041325505             331 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 8J2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325505
VERSION     XP_041325505.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469571.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="olfactory receptor 8J2-like"
                     /calculated_mol_wt=36432
     Region          23..291
                     /region_name="7tmA_OR5-like"
                     /note="olfactory receptor family 5 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15230"
                     /db_xref="CDD:320358"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320358"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320358"
     Site            order(79,82..83,95..100,102..103,106,151,153..157,193,
                     196..198,200..202,204..205,250,253..254,256..257,260,266,
                     268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320358"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320358"
     Region          138..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320358"
     Region          193..223
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320358"
     Region          230..260
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320358"
     Region          267..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320358"
     CDS             1..331
                     /gene="LOC121354742"
                     /coded_by="XM_041469571.1:1..996"
                     /db_xref="GeneID:121354742"
ORIGIN      
        1 mggnytqpkf illgitdtpw vqvplfglfl liyivtlvgn iglmvlvwva pslhtpmyff
       61 lthfsladvc ystvispkml tdllsgdkti swagcvtqfh lfalfvtaec hllaamaydr
      121 hvaichplry vvlvspracw qlvawsylva slsallytsc tfggsfcgpr rvdhffcdas
      181 pvlrlacsdt hgseaaifal aaanglgtsv villsygril htvlgmrsap srarafrtca
      241 shlasvsvfy gslffmylqp asrhgsrdkv asvfytvvsp mlnpfiyslr nkevkaalgk
      301 crrrmlnlcw hqrgaargir eswnglgwkg p
//
LOCUS       XP_041325506             308 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 4D5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325506
VERSION     XP_041325506.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469572.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..308
                     /product="olfactory receptor 4D5-like"
                     /calculated_mol_wt=34072
     Region          34..291
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320604"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320604"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320604"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320604"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320604"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320604"
     CDS             1..308
                     /gene="LOC121354743"
                     /coded_by="XM_041469572.1:221..1147"
                     /db_xref="GeneID:121354743"
ORIGIN      
        1 maqdnssrvt efillglsdr eelqllfftl lllayamvll gnlliivtvr tdpklsspmy
       61 fllcnlsfid icytsvtapr vlvallsghk aiafegcmaq lfflhfvgss emflltvmaf
      121 drytaicrpl hytaimarga cwalvaacwa ggfihsmvqt almlqlpfcg pntihsyfcd
      181 appvvrlaca dtaltewlma snsglislvc flvlvasyal ilakvrarvs qgkwkvlstc
      241 ashamavtll fvpciftylr pagtlltsky vsviytifsp mmnpliytlr ssevkesmwr
      301 lgkrcraf
//
LOCUS       XP_041325507             308 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 4D5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325507
VERSION     XP_041325507.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469573.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..308
                     /product="olfactory receptor 4D5-like"
                     /calculated_mol_wt=34072
     Region          34..291
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320604"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320604"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320604"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320604"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320604"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320604"
     CDS             1..308
                     /gene="LOC121354743"
                     /coded_by="XM_041469573.1:190..1116"
                     /db_xref="GeneID:121354743"
ORIGIN      
        1 maqdnssrvt efillglsdr eelqllfftl lllayamvll gnlliivtvr tdpklsspmy
       61 fllcnlsfid icytsvtapr vlvallsghk aiafegcmaq lfflhfvgss emflltvmaf
      121 drytaicrpl hytaimarga cwalvaacwa ggfihsmvqt almlqlpfcg pntihsyfcd
      181 appvvrlaca dtaltewlma snsglislvc flvlvasyal ilakvrarvs qgkwkvlstc
      241 ashamavtll fvpciftylr pagtlltsky vsviytifsp mmnpliytlr ssevkesmwr
      301 lgkrcraf
//
LOCUS       XP_041325508             308 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 4D5-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325508
VERSION     XP_041325508.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469574.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..308
                     /product="olfactory receptor 4D5-like"
                     /calculated_mol_wt=34072
     Region          34..291
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          60..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320604"
     Region          98..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320604"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320604"
     Region          196..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320604"
     Region          237..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320604"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320604"
     CDS             1..308
                     /gene="LOC121354743"
                     /coded_by="XM_041469574.1:197..1123"
                     /db_xref="GeneID:121354743"
ORIGIN      
        1 maqdnssrvt efillglsdr eelqllfftl lllayamvll gnlliivtvr tdpklsspmy
       61 fllcnlsfid icytsvtapr vlvallsghk aiafegcmaq lfflhfvgss emflltvmaf
      121 drytaicrpl hytaimarga cwalvaacwa ggfihsmvqt almlqlpfcg pntihsyfcd
      181 appvvrlaca dtaltewlma snsglislvc flvlvasyal ilakvrarvs qgkwkvlstc
      241 ashamavtll fvpciftylr pagtlltsky vsviytifsp mmnpliytlr ssevkesmwr
      301 lgkrcraf
//
LOCUS       XP_041325509             324 aa            linear   VRT 06-MAY-2021
DEFINITION  mas-related G-protein coupled receptor member D-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325509
VERSION     XP_041325509.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469575.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="mas-related G-protein coupled receptor member
                     D-like isoform X1"
                     /calculated_mol_wt=36777
     Region          27..272
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          29..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          59..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          100..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          143..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          182..203
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          217..235
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          243..268
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..324
                     /gene="LOC121354744"
                     /coded_by="XM_041469575.1:2259..3233"
                     /db_xref="GeneID:121354744"
ORIGIN      
        1 mevttvspfs aspterhdlc etdvttvaih svtlliclcg lagngavisl lsvkngnyri
       61 fnlavadflf llftvpsall flvedvscsp ivpllyqnff fqlsvvsyyw glfqlipisn
      121 vqyiymfckl cghwdlperl wlvvksvqyw affalftvil tvtflcpsre qehcwaalis
      181 myavillhfa apllisstid fikakwgsqq qqpkrrdivi hltaflnlvl sfchflqqlg
      241 yilvpsqfff llasinssik pfiyflvgsw rtdnsmgrsw rsssmascwk hctvgalrds
      301 lqrvfekqke tnynsygatr dtlv
//
LOCUS       XP_041325510             316 aa            linear   VRT 06-MAY-2021
DEFINITION  mas-related G-protein coupled receptor member X1-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325510
VERSION     XP_041325510.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469576.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="mas-related G-protein coupled receptor member
                     X1-like isoform X2"
                     /calculated_mol_wt=34691
     Region          42..297
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          42..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          106..126
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          149..165
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          181..204
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          218..240
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          249..274
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..316
                     /gene="LOC121354744"
                     /coded_by="XM_041469576.1:1..951"
                     /db_xref="GeneID:121354744"
ORIGIN      
        1 meensttnln lnntfygsld weefirlecs sipysliafa gvclgislcg lagngmvlwf
       61 lgfhtkqspf tvyilnlava dfsllllfll lllaflsvaa fctsllpfvh hyrhfvslgl
      121 laalsvercv svlcpiwyrc hrprhlsgvv sgalwalaga fvsslyltct ytegsetala
      181 gvalaisvvf slmmlvsnlf lllklrcgsr rrqpgklfva illnvllffa fgipfcvevf
      241 lnlpdsgdlf pedpsfllal lnctlnpviy vlvgscrrrr fqrsvrvalr rvfeekagsd
      301 egshgpgdtv vevtal
//
LOCUS       XP_041325511             318 aa            linear   VRT 06-MAY-2021
DEFINITION  proto-oncogene Mas-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325511
VERSION     XP_041325511.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469577.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="proto-oncogene Mas-like"
                     /calculated_mol_wt=35518
     Region          37..302
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          39..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          151..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          186..209
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          223..245
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          254..279
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..318
                     /gene="LOC121354746"
                     /coded_by="XM_041469577.1:1289..2245"
                     /db_xref="GeneID:121354746"
ORIGIN      
        1 mrpstppiil pttaihapgt nhsgavgqpe psytvlkfme sfcllsaacg mvgnglvlwy
       61 lgfrirrnhf tvyilnlaaa dfgyllciav etvqylmqfn vgvqfgiflf ldlfmygtgl
      121 ylltaisier clsvlspiwc rthrpkhlsa vvsgllwals lllntlgyvl ctvrpsprvc
      181 qrlliaigal dflvcaplml lfsltlflrv kcssqpfqtg rlftvimlti llflifavpl
      241 svlilldflg lkflyspeig fvlscvnstl npviyflvgs yrdrkfrltl rlafqrafqd
      301 saddrderet rdtitmss
//
LOCUS       XP_041325512             318 aa            linear   VRT 06-MAY-2021
DEFINITION  proto-oncogene Mas-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325512
VERSION     XP_041325512.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469578.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..318
                     /product="proto-oncogene Mas-like"
                     /calculated_mol_wt=35518
     Region          37..302
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          39..63
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          71..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          108..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          151..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          186..209
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          223..245
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          254..279
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..318
                     /gene="LOC121354746"
                     /coded_by="XM_041469578.1:1304..2260"
                     /db_xref="GeneID:121354746"
ORIGIN      
        1 mrpstppiil pttaihapgt nhsgavgqpe psytvlkfme sfcllsaacg mvgnglvlwy
       61 lgfrirrnhf tvyilnlaaa dfgyllciav etvqylmqfn vgvqfgiflf ldlfmygtgl
      121 ylltaisier clsvlspiwc rthrpkhlsa vvsgllwals lllntlgyvl ctvrpsprvc
      181 qrlliaigal dflvcaplml lfsltlflrv kcssqpfqtg rlftvimlti llflifavpl
      241 svlilldflg lkflyspeig fvlscvnstl npviyflvgs yrdrkfrltl rlafqrafqd
      301 saddrderet rdtitmss
//
LOCUS       XP_041325513             300 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: olfactory receptor 4S2-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325513
VERSION     XP_041325513.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469579.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 2 indels
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="LOW QUALITY PROTEIN: olfactory receptor
                     4S2-like"
                     /calculated_mol_wt=31985
     Region          17..277
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          19..42
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320605"
     Region          51..73
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320605"
     Region          89..111
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320605"
     Region          134..150
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320605"
     Region          183..206
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320605"
     Region          224..246
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320605"
     Region          253..277
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320605"
     CDS             1..300
                     /gene="LOC121354747"
                     /coded_by="XM_041469579.1:66..968"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons"
                     /db_xref="GeneID:121354747"
ORIGIN      
        1 mkefillgls enqgvkkiyf vvfllfymft vagnltvltv mssrclnspm yfflchlsfv
       61 gvcyssvtap qmisgflven ntisfagcig qllglhffgc tevfiltava ydccmavcrp
      121 ppdpaltscr lcgrmvgxsw aggflhstlq tlptallpfc gptkvahyfc dvhpllxlac
      181 aeglaalans gvisrscfli lvtscvvilv slkgqtlarw hkalstcgsl itavilclgp
      241 stfvyihpss glskdrsaam fympitpmln plicplrdge vkgamrklcr gevgsrngkg
//
LOCUS       XP_041325515             314 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: mas-related G-protein coupled receptor member
            H-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325515
VERSION     XP_041325515.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469581.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts          :: corrected 1 indel
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..314
                     /product="LOW QUALITY PROTEIN: mas-related G-protein
                     coupled receptor member H-like"
     Region          26..286
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          27..49
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          50..73
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          93..118
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          141..157
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          177..200
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          214..235
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          240..265
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..314
                     /gene="LOC121354748"
                     /coded_by="XM_041469581.1:<1..945"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon;
                     substituted 1 base at 1 genomic stop codon"
                     /db_xref="GeneID:121354748"
ORIGIN      
        1 xntvspspts ptegddlcei dvtdvsthsv tlliclcgla gngaviglls lesgnsgifd
       61 paladflfll ltvpsallfl vedvscspiv sllylrflfq lsvvsyywgl frltahslek
      121 dvaslcrhcl lptserlmwv vwrakywvfy alftiipavt flcpsheqeh craalismyt
      181 iilllfvapv lisstilfik akrgsqqqqp krcdivivlt vlftlllilc nflqqlgyil
      241 vssqvvfllt cihstikpli yflagscrrp csleslqltl nsvfeeqkdk tasrndapsl
      301 lipscsaegp qesg
//
LOCUS       XP_041325516             497 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide exchange factor for Rab-3A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325516
VERSION     XP_041325516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="guanine nucleotide exchange factor for Rab-3A
                     isoform X1"
                     /calculated_mol_wt=55710
     Region          147..>254
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <210..254
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     Region          310..480
                     /region_name="Rab11BD_RAB3IL1"
                     /note="Rab11 binding domain of Rab-3A-interacting-like
                     protein 1 (RAB3IL1); cd21069"
                     /db_xref="CDD:411033"
     Site            order(368..374,437,440..441,444,448,453..457)
                     /site_type="other"
                     /note="putative Rab11 binding site [polypeptide binding]"
                     /db_xref="CDD:411033"
     CDS             1..497
                     /gene="RAB3IL1"
                     /coded_by="XM_041469582.1:155..1648"
                     /db_xref="GeneID:121354749"
ORIGIN      
        1 mgrkspprel lpvtacipcs slwtnqhtwk stdlefscgs pqqarfwdir cithhkqtla
       61 gtpgdyagle fstkavkhgv lggcplfprq lwdtverehr shpcsqvsfe eesqnppavg
      121 hwkplmpskg nkeeaesgcq daggvhepqs teqlnvsrlr sssveirekg seflrdelhk
      181 aqkelklkdk ecerlskvre qleqeleelt aslfeeahkm vreantkqaa aekqlrearg
      241 kidmlqaevt alktlvitst psspnrelhp qlqspskagf rkghgrnkst ssamvsaasq
      301 nvapepvsre crevdsilfa efqawkespt ldkscsfldr iyredvgpcl dftkqelsel
      361 vreaveqntl tiepvasqav pvgkvaaeec ggpngfrsqi vtkcalsglp rtckhrimlg
      421 dsgnyyyisp scraritavc nfftyiryiq qglvrqdvel mywevmrlrr emslaklgfy
      481 pseiptastw prswgvt
//
LOCUS       XP_041325517             484 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide exchange factor for Rab-3A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325517
VERSION     XP_041325517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469583.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..484
                     /product="guanine nucleotide exchange factor for Rab-3A
                     isoform X2"
                     /calculated_mol_wt=54301
     Region          147..>254
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <210..254
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     Region          310..480
                     /region_name="Rab11BD_RAB3IL1"
                     /note="Rab11 binding domain of Rab-3A-interacting-like
                     protein 1 (RAB3IL1); cd21069"
                     /db_xref="CDD:411033"
     Site            order(368..374,437,440..441,444,448,453..457)
                     /site_type="other"
                     /note="putative Rab11 binding site [polypeptide binding]"
                     /db_xref="CDD:411033"
     CDS             1..484
                     /gene="RAB3IL1"
                     /coded_by="XM_041469583.1:155..1609"
                     /db_xref="GeneID:121354749"
ORIGIN      
        1 mgrkspprel lpvtacipcs slwtnqhtwk stdlefscgs pqqarfwdir cithhkqtla
       61 gtpgdyagle fstkavkhgv lggcplfprq lwdtverehr shpcsqvsfe eesqnppavg
      121 hwkplmpskg nkeeaesgcq daggvhepqs teqlnvsrlr sssveirekg seflrdelhk
      181 aqkelklkdk ecerlskvre qleqeleelt aslfeeahkm vreantkqaa aekqlrearg
      241 kidmlqaevt alktlvitst psspnrelhp qlqspskagf rkghgrnkst ssamvsaasq
      301 nvapepvsre crevdsilfa efqawkespt ldkscsfldr iyredvgpcl dftkqelsel
      361 vreaveqntl tiepvasqav pvgkvaaeec ggpngfrsqi vtkcalsglp rtckhrimlg
      421 dsgnyyyisp scraritavc nfftyiryiq qglvrqdvel mywevmrlrr emslaklgfy
      481 psem
//
LOCUS       XP_041325518             476 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide exchange factor for Rab-3A isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325518
VERSION     XP_041325518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="guanine nucleotide exchange factor for Rab-3A
                     isoform X3"
                     /calculated_mol_wt=53426
     Region          <210..254
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     Region          310..472
                     /region_name="Rab11BD_RAB3IL1"
                     /note="Rab11 binding domain of Rab-3A-interacting-like
                     protein 1 (RAB3IL1); cd21069"
                     /db_xref="CDD:411033"
     Site            order(368..374,429,432..433,436,440,445..449)
                     /site_type="other"
                     /note="putative Rab11 binding site [polypeptide binding]"
                     /db_xref="CDD:411033"
     CDS             1..476
                     /gene="RAB3IL1"
                     /coded_by="XM_041469584.1:155..1585"
                     /db_xref="GeneID:121354749"
ORIGIN      
        1 mgrkspprel lpvtacipcs slwtnqhtwk stdlefscgs pqqarfwdir cithhkqtla
       61 gtpgdyagle fstkavkhgv lggcplfprq lwdtverehr shpcsqvsfe eesqnppavg
      121 hwkplmpskg nkeeaesgcq daggvhepqs teqlnvsrlr sssveirekg seflrdelhk
      181 aqkelklkdk ecerlskvre qleqeleelt aslfeeahkm vreantkqaa aekqlrearg
      241 kidmlqaevt alktlvitst psspnrelhp qlqspskagf rkghgrnkst ssamvsaasq
      301 nvapepvsre crevdsilfa efqawkespt ldkscsfldr iyredvgpcl dftkqelsel
      361 vreaveqntl tiepvasqav pvgkvaaeec ggpkkcalsg lprtckhrim lgdsgnyyyi
      421 spscrarita vcnfftyiry iqqglvrqdv elmywevmrl rremslaklg fypsem
//
LOCUS       XP_041325519             416 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide exchange factor for Rab-3A isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325519
VERSION     XP_041325519.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469585.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="guanine nucleotide exchange factor for Rab-3A
                     isoform X4"
                     /calculated_mol_wt=45469
     Region          <85..129
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     Region          185..335
                     /region_name="Rab11BD_RAB3IP_like"
                     /note="Rab11 binding domain of Rab-3A-interacting protein
                     (RAB3IP), Rab-3A-interacting-like protein 1 (RAB3IL1) and
                     similar proteins; cl41767"
                     /db_xref="CDD:425398"
     Site            order(244..249,312,315..316,319,323,328..330)
                     /site_type="other"
                     /note="Rab11 binding site [polypeptide binding]"
                     /db_xref="CDD:411033"
     CDS             1..416
                     /gene="RAB3IL1"
                     /coded_by="XM_041469585.1:452..1702"
                     /db_xref="GeneID:121354749"
ORIGIN      
        1 mpskgnkeea esgcqdaggv hepqsteqln vsrlrsssve irekgseflr delhkaqkel
       61 klkdkecerl skvreqleqe leeltaslfe eahkmvrean tkqaaaekql reargkidml
      121 qaevtalktl vitstpsspn relhpqlqsp skagfrkghg rnkstssamv saasqnvape
      181 pvsrecrevd silfaefqaw kesptldksc sfldriyred vgpcldftkq elselvreav
      241 eqntltiepv asqavpvgkv aaeecggpng frsqivtkca lsglprtckh rimlgdsgny
      301 yyispscrar itavcnffty iryiqqglvr qdapqpapgq evgelpncaq edaageggas
      361 rflktcckke ahkcgcpipg svqgllggvk nctsehhegv sphadathkl cceevs
//
LOCUS       XP_041325520             416 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide exchange factor for Rab-3A isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325520
VERSION     XP_041325520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="guanine nucleotide exchange factor for Rab-3A
                     isoform X4"
                     /calculated_mol_wt=45469
     Region          <85..129
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     Region          185..335
                     /region_name="Rab11BD_RAB3IP_like"
                     /note="Rab11 binding domain of Rab-3A-interacting protein
                     (RAB3IP), Rab-3A-interacting-like protein 1 (RAB3IL1) and
                     similar proteins; cl41767"
                     /db_xref="CDD:425398"
     Site            order(244..249,312,315..316,319,323,328..330)
                     /site_type="other"
                     /note="Rab11 binding site [polypeptide binding]"
                     /db_xref="CDD:411033"
     CDS             1..416
                     /gene="RAB3IL1"
                     /coded_by="XM_041469586.1:349..1599"
                     /db_xref="GeneID:121354749"
ORIGIN      
        1 mpskgnkeea esgcqdaggv hepqsteqln vsrlrsssve irekgseflr delhkaqkel
       61 klkdkecerl skvreqleqe leeltaslfe eahkmvrean tkqaaaekql reargkidml
      121 qaevtalktl vitstpsspn relhpqlqsp skagfrkghg rnkstssamv saasqnvape
      181 pvsrecrevd silfaefqaw kesptldksc sfldriyred vgpcldftkq elselvreav
      241 eqntltiepv asqavpvgkv aaeecggpng frsqivtkca lsglprtckh rimlgdsgny
      301 yyispscrar itavcnffty iryiqqglvr qdapqpapgq evgelpncaq edaageggas
      361 rflktcckke ahkcgcpipg svqgllggvk nctsehhegv sphadathkl cceevs
//
LOCUS       XP_041325521             382 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide exchange factor for Rab-3A isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325521
VERSION     XP_041325521.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469587.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="guanine nucleotide exchange factor for Rab-3A
                     isoform X5"
                     /calculated_mol_wt=42288
     Region          147..>254
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          <210..254
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     Region          283..>313
                     /region_name="Rab11BD_RAB3IP_like"
                     /note="Rab11 binding domain of Rab-3A-interacting protein
                     (RAB3IP), Rab-3A-interacting-like protein 1 (RAB3IL1) and
                     similar proteins; cl41767"
                     /db_xref="CDD:425398"
     CDS             1..382
                     /gene="RAB3IL1"
                     /coded_by="XM_041469587.1:192..1340"
                     /db_xref="GeneID:121354749"
ORIGIN      
        1 mgrkspprel lpvtacipcs slwtnqhtwk stdlefscgs pqqarfwdir cithhkqtla
       61 gtpgdyagle fstkavkhgv lggcplfprq lwdtverehr shpcsqvsfe eesqnppavg
      121 hwkplmpskg nkeeaesgcq daggvhepqs teqlnvsrlr sssveirekg seflrdelhk
      181 aqkelklkdk ecerlskvre qleqeleelt aslfeeahkm vreantkqaa aekqlrearg
      241 kidmlqaevt alktlvitst psspnrelhp qlqspskagf rkghgrnkst ssamvsaasq
      301 nvapepvsre cresgfpall slllcilpgk aihityepgw qalgadassf ssssrqvtnl
      361 wewvgptcls hfqpfsssfl lc
//
LOCUS       XP_041325522             375 aa            linear   VRT 06-MAY-2021
DEFINITION  guanine nucleotide exchange factor for Rab-3A isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325522
VERSION     XP_041325522.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469588.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..375
                     /product="guanine nucleotide exchange factor for Rab-3A
                     isoform X6"
                     /calculated_mol_wt=42085
     Region          <109..153
                     /region_name="Sec2p"
                     /note="GDP/GTP exchange factor Sec2p; pfam06428"
                     /db_xref="CDD:428938"
     Region          209..371
                     /region_name="Rab11BD_RAB3IL1"
                     /note="Rab11 binding domain of Rab-3A-interacting-like
                     protein 1 (RAB3IL1); cd21069"
                     /db_xref="CDD:411033"
     Site            order(267..273,328,331..332,335,339,344..348)
                     /site_type="other"
                     /note="putative Rab11 binding site [polypeptide binding]"
                     /db_xref="CDD:411033"
     CDS             1..375
                     /gene="RAB3IL1"
                     /coded_by="XM_041469588.1:1503..2630"
                     /db_xref="GeneID:121354749"
ORIGIN      
        1 mlrgqvsfee esqnppavgh wkplmpskgn keeaesgcqd aggvhepqst eqlnvsrlrs
       61 ssveirekgs eflrdelhka qkelklkdke cerlskvreq leqeleelta slfeeahkmv
      121 reantkqaaa ekqlreargk idmlqaevta lktlvitstp sspnrelhpq lqspskagfr
      181 kghgrnksts samvsaasqn vapepvsrec revdsilfae fqawkesptl dkscsfldri
      241 yredvgpcld ftkqelselv reaveqntlt iepvasqavp vgkvaaeecg gpkkcalsgl
      301 prtckhriml gdsgnyyyis pscraritav cnfftyiryi qqglvrqdve lmywevmrlr
      361 remslaklgf ypsem
//
LOCUS       XP_041325523             444 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-CoA 6-desaturase [Pyrgilauda ruficollis].
ACCESSION   XP_041325523
VERSION     XP_041325523.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469589.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..444
                     /product="acyl-CoA 6-desaturase"
                     /calculated_mol_wt=51900
     Region          22..95
                     /region_name="Cyt-b5"
                     /note="Cytochrome b5-like Heme/Steroid binding domain;
                     pfam00173"
                     /db_xref="CDD:459698"
     Region          162..412
                     /region_name="Delta6-FADS-like"
                     /note="The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like
                     CD includes the integral-membrane enzymes: delta-4,
                     delta-5, delta-6, delta-8, delta-8-sphingolipid, and
                     delta-11 desaturases found in vertebrates, higher plants,
                     fungi, and bacteria. These desaturases...; cd03506"
                     /db_xref="CDD:239583"
     Site            order(180,184,217,220..221,382,385..386)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239583"
     CDS             1..444
                     /gene="FADS2"
                     /coded_by="XM_041469589.1:252..1586"
                     /db_xref="GeneID:121354750"
ORIGIN      
        1 mgkggeqggd sgepaaqirf ytweeiqkhn lrtdkwlvie rkvynvtkwa krhpggqrvi
       61 shcagedatd afqafhinpt lvqkflkpll igelapgeps qdrdknsqlv edfrtlrkta
      121 edmnlfrasp lffsfylghi ilmeilawlm isyfgtgwit tlilaciltt sqaqagwlqh
      181 dfghlsvfkk sswnhivhkf vighlkgasa nwwnhrhfqh hakpnifqkd pdvnmlhifv
      241 lgdtqpveyg kkklkylpyn hqheyfflif ppllipvyfq iqiistmikr rfwadlawai
      301 syylryfity ipfygvlgsl clltfvrfle shwfvwvtqm nhipmeidse khrdwlssqm
      361 aatcnieqsf fndwftghln fqiehhlfpt mprhnfwkvk plvkslcaky gvhyeekplg
      421 kafvdivgsl kksgdlwlda ylhk
//
LOCUS       XP_041325525             442 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-CoA (8-3)-desaturase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325525
VERSION     XP_041325525.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469591.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..442
                     /product="acyl-CoA (8-3)-desaturase isoform X1"
                     /calculated_mol_wt=51758
     Region          12..437
                     /region_name="PLN03199"
                     /note="delta6-acyl-lipid desaturase-like protein;
                     Provisional"
                     /db_xref="CDD:178740"
     Region          159..410
                     /region_name="Delta6-FADS-like"
                     /note="The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like
                     CD includes the integral-membrane enzymes: delta-4,
                     delta-5, delta-6, delta-8, delta-8-sphingolipid, and
                     delta-11 desaturases found in vertebrates, higher plants,
                     fungi, and bacteria. These desaturases...; cd03506"
                     /db_xref="CDD:239583"
     Site            order(177,181,214,217..218,380,383..384)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239583"
     CDS             1..442
                     /gene="FADS1"
                     /coded_by="XM_041469591.1:58..1386"
                     /db_xref="GeneID:121354751"
ORIGIN      
        1 megpepvrgg mrrftweeig qrngrgpapq erwlvidrkv ydishfcrrh pggsrvishy
       61 agqdatdpfi afhldkalvr kymnpllige lapdqpsfep sknkklvedf relratverm
      121 gllqpnhaff ilclchilml dvaawliiwy fgaslvpflf savllgtvqa qagwlqhdfg
      181 hlsvfsksrw nhwvhkfvig hlkgapasww nhlhfqhhak pncfrkdpdv nmhplffalg
      241 ktlsvelgvq kkkfmpynhq hkyffiigpp alvplyfqwy ifyfavqrkq wvdlawmlsf
      301 yirffltylp flgvkgtlgl hllvrfiesn wfvwvtqmnh ipmhidydkn vdwfstqlqa
      361 tcnvhqslfn dwfsghlnfq iehhlfptmp rhnywkvapl vkslcakhgl eyqckpllta
      421 fadivhslkd sgelwldayl hk
//
LOCUS       XP_041325526             381 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-CoA (8-3)-desaturase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325526
VERSION     XP_041325526.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469592.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="acyl-CoA (8-3)-desaturase isoform X2"
                     /calculated_mol_wt=44802
     Region          98..349
                     /region_name="Delta6-FADS-like"
                     /note="The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like
                     CD includes the integral-membrane enzymes: delta-4,
                     delta-5, delta-6, delta-8, delta-8-sphingolipid, and
                     delta-11 desaturases found in vertebrates, higher plants,
                     fungi, and bacteria. These desaturases...; cd03506"
                     /db_xref="CDD:239583"
     Site            order(116,120,153,156..157,319,322..323)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239583"
     CDS             1..381
                     /gene="FADS1"
                     /coded_by="XM_041469592.1:91..1236"
                     /db_xref="GeneID:121354751"
ORIGIN      
        1 mwgqqdpfia fhldkalvrk ymnplligel apdqpsfeps knkklvedfr elratvermg
       61 llqpnhaffi lclchilmld vaawliiwyf gaslvpflfs avllgtvqaq agwlqhdfgh
      121 lsvfsksrwn hwvhkfvigh lkgapaswwn hlhfqhhakp ncfrkdpdvn mhplffalgk
      181 tlsvelgvqk kkfmpynhqh kyffiigppa lvplyfqwyi fyfavqrkqw vdlawmlsfy
      241 irffltylpf lgvkgtlglh llvrfiesnw fvwvtqmnhi pmhidydknv dwfstqlqat
      301 cnvhqslfnd wfsghlnfqi ehhlfptmpr hnywkvaplv kslcakhgle yqckplltaf
      361 adivhslkds gelwldaylh k
//
LOCUS       XP_041325527             389 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-CoA (8-3)-desaturase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325527
VERSION     XP_041325527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469593.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="acyl-CoA (8-3)-desaturase-like"
                     /calculated_mol_wt=46245
     Region          107..357
                     /region_name="Delta6-FADS-like"
                     /note="The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like
                     CD includes the integral-membrane enzymes: delta-4,
                     delta-5, delta-6, delta-8, delta-8-sphingolipid, and
                     delta-11 desaturases found in vertebrates, higher plants,
                     fungi, and bacteria. These desaturases...; cd03506"
                     /db_xref="CDD:239583"
     Site            order(125,129,162,165..166,327,330..331)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239583"
     CDS             1..389
                     /gene="LOC121354752"
                     /coded_by="XM_041469593.1:277..1446"
                     /db_xref="GeneID:121354752"
ORIGIN      
        1 mrtlfyllfl eekrdafvaf hndkslvkky lkslligela pdqpsfesnk kkslledfre
       61 lrctiekmgl lrpnyffffl iflhllvlda aswlviwyfg vsllpflagm mffttaqiqm
      121 gwfqhdlghc svfrkprwnh llqvvvinml kglpaswwnh lhnqhhakpn cfrkdpdlnm
      181 hpllfslgkt lsmelgkqkk kfmpynyqhk yfillaplal ipffqlstiy faikrkkwld
      241 lilvvtfnir vclmyvplmg fktfmiyywl srylesswfi wvsqmnhipm didydknkdw
      301 vstqlhatcn vnqsvfndwf tghlnfqieh hlfptmprhn ywkvaplvks lcdkhgieyk
      361 sktlltafvd ilhslkdsge hwleaylhg
//
LOCUS       XP_041325528             180 aa            linear   VRT 06-MAY-2021
DEFINITION  ferritin heavy chain [Pyrgilauda ruficollis].
ACCESSION   XP_041325528
VERSION     XP_041325528.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469594.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..180
                     /product="ferritin heavy chain"
                     /calculated_mol_wt=20942
     Region          13..173
                     /region_name="Euk_Ferritin"
                     /note="eukaryotic ferritins; cd01056"
                     /db_xref="CDD:153114"
     Site            order(27,34,61..62,65,107,141)
                     /site_type="other"
                     /note="ferroxidase diiron center [ion binding]"
                     /db_xref="CDD:153114"
     Site            order(57,60..61,64)
                     /site_type="active"
                     /note="ferrihydrite nucleation center [active]"
                     /db_xref="CDD:153114"
     Site            order(118,131,134)
                     /site_type="active"
                     /note="iron ion channel [active]"
                     /db_xref="CDD:153114"
     CDS             1..180
                     /gene="LOC121354753"
                     /coded_by="XM_041469594.1:141..683"
                     /db_xref="GeneID:121354753"
ORIGIN      
        1 maappsqvrq nyhqdceaav nrqinlelya syvylsmsyy fdrddvalkn fakyflhqsh
       61 eerehaeklm klqnqrggri flqdvkkpdr ddwengltam ecalhleknv nqsllelhkl
      121 atekndphlc dfiethylde qvkaikelgd hvtnlrkmga pkygmaeylf dkhtlgechs
//
LOCUS       XP_041325529             759 aa            linear   VRT 06-MAY-2021
DEFINITION  bestrophin-1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325529
VERSION     XP_041325529.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469595.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..759
                     /product="bestrophin-1-like"
                     /calculated_mol_wt=84935
     Region          8..313
                     /region_name="Bestrophin"
                     /note="RFP-TM, chloride channel; pfam01062"
                     /db_xref="CDD:460047"
     CDS             1..759
                     /gene="LOC121354754"
                     /coded_by="XM_041469595.1:1..2280"
                     /db_xref="GeneID:121354754"
ORIGIN      
        1 mtvtytnrva darlgtfsql llqwkgsiyk llyseflifi slyftislvy rlilsesqrl
       61 mfeklalycn syaelipvsf vlgfyvalvv srwwaqyesi pwpdrimnlv scnvdgedey
      121 grllrrtlmr ysnlvsvlil rsvstavykr fpsmehvvra glmtpeehkk feslnsphnk
      181 fwipcvwfsn lavkarndgr irdsvllqgi lnelntlrsq cgklygydwi siplvytqvv
      241 tvavysffla cligrqfldp ekaypgheld lfvpvftflq fffyagwlkv aeqlinpfge
      301 ddddfeanwl idrnlqvslm avdemhqdlp ilekdlywne pdpqppytaa taeykrpsfl
      361 gstfdismqk eemefqpleq ikeneeanhs tpllghlgrl lgvqspnfsr sssrmnllrr
      421 rgdpaspfsh ytyqdmgkvg spcginqprg dsqeqwdsee gklrefdafm stpfyerpgf
      481 ysapqtpiss ipmifpsrrq grkkppalss iaacstslrd vivnaspsra sdvdksqssl
      541 gsaaketfvw pterskgpds vavtveegks ssreaattgs pgaqstasns pkfpflpetp
      601 ehekhgsfks lknskasrpp wlnlestasa tpnsehssaf htpsnktpgg stslcfsftp
      661 vtspalersh kgnlgpears lsledaasap dqhpevsrnm rdtgngntnp papkeprrae
      721 spspndsgis laegdyvglm evileasesp geeqidqys
//
LOCUS       XP_041325530             433 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-CoA (8-3)-desaturase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325530
VERSION     XP_041325530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..433
                     /product="acyl-CoA (8-3)-desaturase-like"
                     /calculated_mol_wt=51090
     Region          2..425
                     /region_name="PLN03199"
                     /note="delta6-acyl-lipid desaturase-like protein;
                     Provisional"
                     /db_xref="CDD:178740"
     Region          150..401
                     /region_name="Delta6-FADS-like"
                     /note="The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like
                     CD includes the integral-membrane enzymes: delta-4,
                     delta-5, delta-6, delta-8, delta-8-sphingolipid, and
                     delta-11 desaturases found in vertebrates, higher plants,
                     fungi, and bacteria. These desaturases...; cd03506"
                     /db_xref="CDD:239583"
     Site            order(168,172,205,208..209,371,374..375)
                     /site_type="other"
                     /note="putative di-iron ligands [ion binding]"
                     /db_xref="CDD:239583"
     CDS             1..433
                     /gene="LOC121354755"
                     /coded_by="XM_041469596.1:1..1302"
                     /db_xref="GeneID:121354755"
ORIGIN      
        1 mrrftweeig qrngrgpapq erwlvidrkv ydishfcrrh pggarllvss hagqdatdaf
       61 vafhvdkvlv skylkplqig elapdqpsie ptknemlvkd frelrstver mgllepnqlf
      121 fflllahill ldtaawlilf yfgtsllpfv fslllltisq vqaswlqhdl ghlsvfrktk
      181 wnhllhkfvm chligasakw wtllhsqhha kpncfhkdpd idmhpflftl gkkfsvelgi
      241 kkkkympynh qhkyffitlp pllfptyfhc htfyiaytkk ywadlawmlt fyirffytyg
      301 slletkslla yyfifrmles swfvwvsqmn hipmdidydk nldwmstqll atcnveqslf
      361 ndwftghlnf qiehhlfptm prhnywkvap lvkslcakhg leyqckpllt afadivhslk
      421 tsgelwhday lhk
//
LOCUS       XP_041325531             404 aa            linear   VRT 06-MAY-2021
DEFINITION  catalase [Pyrgilauda ruficollis].
ACCESSION   XP_041325531
VERSION     XP_041325531.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469597.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="catalase"
                     /calculated_mol_wt=45531
     Region          28..404
                     /region_name="Catalase"
                     /note="pfam00199"
                     /db_xref="CDD:459708"
     CDS             1..404
                     /gene="CAT"
                     /coded_by="XM_041469597.1:233..1447"
                     /db_xref="GeneID:121354756"
ORIGIN      
        1 madgrddaan qlklwksqrg sqkpdvlttg agnptgdkln iltvgprgpl lvqdvvftde
       61 mahfdrerip ervvhakgag afgyfevthd itqyckakvf ehigkrtpla irfstvages
      121 gsadtvrdpr gfamkfyted gnwdlvgnnt piffirdaml fpsfihsqkr npqthlkdpd
      181 mvwdfwslrp eslhqvsflf sdrgipdgyr hmngygshtf klvnadgrav yckfhaktdq
      241 giknlsveea grlastdpdy airdlynaia kgnypswsfy iqvmtfeeae kfpfnpfdvt
      301 kvwphgdypl ipvgklvlnr npvnyfaeve qmaydpsnmp pgiepspdkm lqgrlfsypd
      361 thrhrlgpny lqipvncpfr arvanyqrdg pmtvsdnqgg apny
//
LOCUS       XP_041325532            1016 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat and BTB/POZ domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325532
VERSION     XP_041325532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469598.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1016
                     /product="ankyrin repeat and BTB/POZ domain-containing
                     protein 2"
                     /calculated_mol_wt=113189
     Region          184..288
                     /region_name="HFD_ABTB2-like"
                     /note="histone-fold domain found in ankyrin repeat and
                     BTB/POZ domain-containing protein 2 (ABTB2) and similar
                     proteins; cd22913"
                     /db_xref="CDD:467038"
     Region          <490..664
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          516..557
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(519..520,523..525,527..528,532,535,557,559,561,
                     565..566,569..571,573..574,578,581,596,598,600,604..605,
                     608..610,612..613,617,620)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          559..596
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          598..623
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          812..945
                     /region_name="BTB_POZ_ABTB2_BPOZ2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Ankyrin repeat
                     and BTB/POZ domain-containing protein 2 (ABTB2); cd18350"
                     /db_xref="CDD:349659"
     Region          938..1016
                     /region_name="BACK_ABTB2"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     ankyrin repeat and BTB/POZ domain-containing protein 2
                     (ABTB2); cd18526"
                     /db_xref="CDD:350601"
     CDS             1..1016
                     /gene="ABTB2"
                     /coded_by="XM_041469598.1:231..3281"
                     /db_xref="GeneID:121354758"
ORIGIN      
        1 magiysstlk tledltldsg ygagdscrsl slsssksnsq aftssqhrgn wwyysgsmns
       61 rnnswdtvnt vlpedpevad ifskcpklpd leeypwtded igrilrkgkg egqgrsfsqe
      121 avrrlsqllr ralirvsrea qrlsvmhskc trfevqsaik liqswalaes cvlatvkals
      181 lysmsagdgl rkgksarcgl tfsvgrffrw mvdtrisvri heyaaislta cmenlveeik
      241 arvlasqspd gggeisaeil emvinndael wgvlqpyehl icgknangvl slpayfspyh
      301 dgsvcsdgra dayaqlelrt leqsllatcv gsiselsdlv sramhhmqcl ntirpgmspv
      361 rqtrqqqpis wspdalhtly yflrcpqmes menpnldppr mtlsnerpfm llpplmewmr
      421 vaityaehrr sltvdsddir qtarlllpgl dceprqlkpe ccfssfrrld akaatekfqq
      481 dlgfrmlncg rtdlisqaid algpdgvntm ddqgmtplmy acaagdeamv qmlidaganl
      541 dipvpsaspr ypsvhpdsrh wtaltfavlh ghisvvqlll dagahvegsa vntgednyae
      601 tplqlasaag nyelvsllls rgadpllsml evngmssslh edmncfshsa ahghrnvlrk
      661 llsqpqqakg dvlsleeila egvesdtssq gsssegqvrl cktrmkalqe amyysaehgy
      721 vditmelral gvpwklhvwi eslrttfsqs rysvvqtllr efvtikeedy neelvseglq
      781 lmfdilktsk ndsinqqlas ifthcygssp ipsipeirkt lparldphfl nnkemsdvtf
      841 lvegklfyah kvllvtasnr fktlmtnkte hdghgsktve isdmkynifk mlmqylyygg
      901 tesmeipttd ilellsaasl fqldglqrhc eilcaqtism dnsvniykya kihnapelas
      961 fcegfflkhm sslleqdsfk qliysrnskv qgldplrdlq aalagrlhsv yvtsrv
//
LOCUS       XP_041325533             333 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 5V1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325533
VERSION     XP_041325533.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469599.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523316.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="olfactory receptor 5V1-like"
                     /calculated_mol_wt=36758
     Region          38..298
                     /region_name="7tmA_OR"
                     /note="olfactory receptors, member of the class A family
                     of seven-transmembrane G protein-coupled receptors;
                     cd13954"
                     /db_xref="CDD:320092"
     Region          63..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320092"
     Site            order(85,88..89,101..106,108..109,112,157,159..163,199,
                     202..204,206..208,210..211,256,259..260,262..263,266,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320092"
     Region          101..131
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320092"
     Region          145..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320092"
     Region          199..229
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320092"
     Region          236..266
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320092"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320092"
     CDS             1..333
                     /gene="LOC121354759"
                     /coded_by="XM_041469599.1:1..1002"
                     /db_xref="GeneID:121354759"
ORIGIN      
        1 mrgktqrvnl savsefvfvg lsdapeicll lfvlflliyl atvagnitll aaistdshlh
       61 spmyfflgnl slldllctni tvprmlvall lehkeisfsg clfqhfslia vvgteiflla
      121 vmaydryvav chplrypsiv stklcaqlal gtwatgllns llhtslvftl sfcgpnkiqq
      181 yycdmppmla lscssthsre lvilvvagvl gssacvvtlv sylcilleil arkspgmwhk
      241 afstcgshls vvclfygtti ctyvrpsfty sphwdrvvsm lygmltplln piiyslrnke
      301 vkcalkrain mkicnikedv ndlffsskns iql
//
LOCUS       XP_041325534             151 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase BRE1A-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325534
VERSION     XP_041325534.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469600.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523317.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>151
                     /product="E3 ubiquitin-protein ligase BRE1A-like"
     Region          18..>151
                     /region_name="EnvC"
                     /note="Septal ring factor EnvC, activator of murein
                     hydrolases AmiA and AmiB [Cell cycle control, cell
                     division, chromosome partitioning]; COG4942"
                     /db_xref="CDD:443969"
     CDS             1..151
                     /gene="LOC121354760"
                     /coded_by="XM_041469600.1:7..>459"
                     /db_xref="GeneID:121354760"
ORIGIN      
        1 meeavvelnt ylshengrlq eladvlqekh rvmsqefskl qervetaesr vsvletmidd
       61 lqwdidkirk reqrlnrhla dvlervnskg ykvygagssi yggtitinar kfeemnaele
      121 enkelagnrl neleelrqdl eevttqnekl k
//
LOCUS       XP_041325536             132 aa            linear   VRT 06-MAY-2021
DEFINITION  menin-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325536
VERSION     XP_041325536.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469602.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..132
                     /product="menin-like"
     Region          <1..>131
                     /region_name="Menin"
                     /note="Scaffolding protein menin encoded by the MEN1 gene;
                     cl27083"
                     /db_xref="CDD:421448"
     CDS             1..132
                     /gene="LOC121354761"
                     /coded_by="XM_041469602.1:<1..399"
                     /db_xref="GeneID:121354761"
ORIGIN      
        1 swlylkgsyl rctrhmevaf mvcainpsid ghtdslellq lqqrllwlly dmghldrypm
       61 algnladlee leptpgrpdp ltlyhqgihs artyynnehi ypylylagfh crnknvkeal
      121 eawadtatvi qe
//
LOCUS       XP_041325537             238 aa            linear   VRT 06-MAY-2021
DEFINITION  epithelial discoidin domain-containing receptor 1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325537
VERSION     XP_041325537.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469603.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523394.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..238
                     /product="epithelial discoidin domain-containing receptor
                     1-like"
     CDS             1..238
                     /gene="LOC121354762"
                     /coded_by="XM_041469603.1:<1..718"
                     /codon_start=2
                     /db_xref="GeneID:121354762"
ORIGIN      
        1 lhfgglgqls dgvlglddfl rtrerrlwpg ydyvgwprpp gphpnvelef efqelrtfha
       61 mqvhcnnlht rgvgifrave crfkkilata weptvvthsl agatkdpsar lvtvplggrh
      121 arfiqcrfff gaewmlfsev sflsevlddp vgasgwpptp dpssailena rdrdgatnvt
      181 aaapgeaelv ppaaqgeagq spallgclga iillllaiii lilrrrrgaa gslgkgpq
//
LOCUS       XP_041325538             701 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein intermediate chain CFAP94, axonemal isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325538
VERSION     XP_041325538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469604.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..701
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..701
                     /product="dynein intermediate chain CFAP94, axonemal
                     isoform X1"
                     /calculated_mol_wt=79519
     Region          45..215
                     /region_name="Casc1_N"
                     /note="Cancer susceptibility candidate 1 N-terminus;
                     pfam15927"
                     /db_xref="CDD:464947"
     CDS             1..701
                     /gene="DNAI7"
                     /coded_by="XM_041469604.1:162..2267"
                     /db_xref="GeneID:121354763"
ORIGIN      
        1 mgpkakkkgk skkekeaklk aeallraqqe eeerlererl yrehleklea kyqgeresel
       61 aelnsleqkf lsaqqwkmdy reqakwehyl scdgtpdptv pqeintfmsl wrddqdediq
      121 lvmtkeevvl nlieklefll leaspeevtd kqrdqyqevi lqlqdllhqk yndatqnllk
      181 iasmyedset gnmhtvlkdk nitfciwvnl kkkarfkdhv fqeaghgfel pkslalssva
      241 vrvlhthydh lsplwvqcqg lprqeasdsm elaehpedtg qgpgeeeekg reepnvpaae
      301 eagskgrkes ftslketsnn tddiketeee trknsdildv psqeedallq eepggkeeap
      361 qvvdleqlvp vggvyhisal qlppqaqdvg dwtmvelldv glevypyspg eaedgtqeav
      421 qitlrlpdnv iyfkvpvlar wdpagqqwrt dgiskityea eeksitfsmg afytvallqd
      481 ghlnlpyqaw elhptgvdeg lftvtavfat iqiqikdnqc mlssvvveke evlshitgkw
      541 mspfalraal kragvnifpa eyspkyvpvp rkaaraevka yeqmallaaa fafahskwnk
      601 eaepekvvfk vsehltagsa kdndwalfmf sgekvqnlkl tetseafsee lkeesefhst
      661 lyhmlkdsas neamdkvera gflfidsvyq lllatrvlay s
//
LOCUS       XP_041325539             652 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein intermediate chain CFAP94, axonemal isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325539
VERSION     XP_041325539.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469605.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..652
                     /product="dynein intermediate chain CFAP94, axonemal
                     isoform X2"
                     /calculated_mol_wt=73681
     Region          45..166
                     /region_name="Casc1_N"
                     /note="Cancer susceptibility candidate 1 N-terminus;
                     pfam15927"
                     /db_xref="CDD:464947"
     CDS             1..652
                     /gene="DNAI7"
                     /coded_by="XM_041469605.1:162..2120"
                     /db_xref="GeneID:121354763"
ORIGIN      
        1 mgpkakkkgk skkekeaklk aeallraqqe eeerlererl yrehleklea kyqgeresel
       61 aelnsleqkf lsaqqwkmdy reqakwehyl scdgtpdptv pqeintfmsl wrddqdediq
      121 lvmtkeevvl niasmyedse tgnmhtvlkd knitfciwvn lkkkarfkdh vfqeaghgfe
      181 lpkslalssv avrvlhthyd hlsplwvqcq glprqeasds melaehpedt gqgpgeeeek
      241 greepnvpaa eeagskgrke sftslketsn ntddiketee etrknsdild vpsqeedall
      301 qeepggkeea pqvvdleqlv pvggvyhisa lqlppqaqdv gdwtmvelld vglevypysp
      361 geaedgtqea vqitlrlpdn viyfkvpvla rwdpagqqwr tdgiskitye aeeksitfsm
      421 gafytvallq dghlnlpyqa welhptgvde glftvtavfa tiqiqikdnq cmlssvvvek
      481 eevlshitgk wmspfalraa lkragvnifp aeyspkyvpv prkaaraevk ayeqmallaa
      541 afafahskwn keaepekvvf kvsehltags akdndwalfm fsgekvqnlk ltetseafse
      601 elkeesefhs tlyhmlkdsa sneamdkver agflfidsvy qlllatrvla ys
//
LOCUS       XP_041325540             624 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein intermediate chain CFAP94, axonemal isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325540
VERSION     XP_041325540.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469606.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="dynein intermediate chain CFAP94, axonemal
                     isoform X3"
                     /calculated_mol_wt=70351
     Region          <1..138
                     /region_name="Casc1_N"
                     /note="Cancer susceptibility candidate 1 N-terminus;
                     pfam15927"
                     /db_xref="CDD:464947"
     CDS             1..624
                     /gene="DNAI7"
                     /coded_by="XM_041469606.1:328..2202"
                     /db_xref="GeneID:121354763"
ORIGIN      
        1 mdyreqakwe hylscdgtpd ptvpqeintf mslwrddqde diqlvmtkee vvlnliekle
       61 fllleaspee vtdkqrdqyq evilqlqdll hqkyndatqn llkiasmyed setgnmhtvl
      121 kdknitfciw vnlkkkarfk dhvfqeaghg felpkslals svavrvlhth ydhlsplwvq
      181 cqglprqeas dsmelaehpe dtgqgpgeee ekgreepnvp aaeeagskgr kesftslket
      241 snntddiket eeetrknsdi ldvpsqeeda llqeepggke eapqvvdleq lvpvggvyhi
      301 salqlppqaq dvgdwtmvel ldvglevypy spgeaedgtq eavqitlrlp dnviyfkvpv
      361 larwdpagqq wrtdgiskit yeaeeksitf smgafytval lqdghlnlpy qawelhptgv
      421 deglftvtav fatiqiqikd nqcmlssvvv ekeevlshit gkwmspfalr aalkragvni
      481 fpaeyspkyv pvprkaarae vkayeqmall aaafafahsk wnkeaepekv vfkvsehlta
      541 gsakdndwal fmfsgekvqn lkltetseaf seelkeesef hstlyhmlkd sasneamdkv
      601 eragflfids vyqlllatrv lays
//
LOCUS       XP_041325541             624 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein intermediate chain CFAP94, axonemal isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325541
VERSION     XP_041325541.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469607.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="dynein intermediate chain CFAP94, axonemal
                     isoform X3"
                     /calculated_mol_wt=70351
     Region          <1..138
                     /region_name="Casc1_N"
                     /note="Cancer susceptibility candidate 1 N-terminus;
                     pfam15927"
                     /db_xref="CDD:464947"
     CDS             1..624
                     /gene="DNAI7"
                     /coded_by="XM_041469607.1:351..2225"
                     /db_xref="GeneID:121354763"
ORIGIN      
        1 mdyreqakwe hylscdgtpd ptvpqeintf mslwrddqde diqlvmtkee vvlnliekle
       61 fllleaspee vtdkqrdqyq evilqlqdll hqkyndatqn llkiasmyed setgnmhtvl
      121 kdknitfciw vnlkkkarfk dhvfqeaghg felpkslals svavrvlhth ydhlsplwvq
      181 cqglprqeas dsmelaehpe dtgqgpgeee ekgreepnvp aaeeagskgr kesftslket
      241 snntddiket eeetrknsdi ldvpsqeeda llqeepggke eapqvvdleq lvpvggvyhi
      301 salqlppqaq dvgdwtmvel ldvglevypy spgeaedgtq eavqitlrlp dnviyfkvpv
      361 larwdpagqq wrtdgiskit yeaeeksitf smgafytval lqdghlnlpy qawelhptgv
      421 deglftvtav fatiqiqikd nqcmlssvvv ekeevlshit gkwmspfalr aalkragvni
      481 fpaeyspkyv pvprkaarae vkayeqmall aaafafahsk wnkeaepekv vfkvsehlta
      541 gsakdndwal fmfsgekvqn lkltetseaf seelkeesef hstlyhmlkd sasneamdkv
      601 eragflfids vyqlllatrv lays
//
LOCUS       XP_041325542             624 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein intermediate chain CFAP94, axonemal isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325542
VERSION     XP_041325542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="dynein intermediate chain CFAP94, axonemal
                     isoform X3"
                     /calculated_mol_wt=70351
     Region          <1..138
                     /region_name="Casc1_N"
                     /note="Cancer susceptibility candidate 1 N-terminus;
                     pfam15927"
                     /db_xref="CDD:464947"
     CDS             1..624
                     /gene="DNAI7"
                     /coded_by="XM_041469608.1:258..2132"
                     /db_xref="GeneID:121354763"
ORIGIN      
        1 mdyreqakwe hylscdgtpd ptvpqeintf mslwrddqde diqlvmtkee vvlnliekle
       61 fllleaspee vtdkqrdqyq evilqlqdll hqkyndatqn llkiasmyed setgnmhtvl
      121 kdknitfciw vnlkkkarfk dhvfqeaghg felpkslals svavrvlhth ydhlsplwvq
      181 cqglprqeas dsmelaehpe dtgqgpgeee ekgreepnvp aaeeagskgr kesftslket
      241 snntddiket eeetrknsdi ldvpsqeeda llqeepggke eapqvvdleq lvpvggvyhi
      301 salqlppqaq dvgdwtmvel ldvglevypy spgeaedgtq eavqitlrlp dnviyfkvpv
      361 larwdpagqq wrtdgiskit yeaeeksitf smgafytval lqdghlnlpy qawelhptgv
      421 deglftvtav fatiqiqikd nqcmlssvvv ekeevlshit gkwmspfalr aalkragvni
      481 fpaeyspkyv pvprkaarae vkayeqmall aaafafahsk wnkeaepekv vfkvsehlta
      541 gsakdndwal fmfsgekvqn lkltetseaf seelkeesef hstlyhmlkd sasneamdkv
      601 eragflfids vyqlllatrv lays
//
LOCUS       XP_041325543             607 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein intermediate chain CFAP94, axonemal isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325543
VERSION     XP_041325543.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469609.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="dynein intermediate chain CFAP94, axonemal
                     isoform X4"
                     /calculated_mol_wt=69013
     Region          45..215
                     /region_name="Casc1_N"
                     /note="Cancer susceptibility candidate 1 N-terminus;
                     pfam15927"
                     /db_xref="CDD:464947"
     CDS             1..607
                     /gene="DNAI7"
                     /coded_by="XM_041469609.1:162..1985"
                     /db_xref="GeneID:121354763"
ORIGIN      
        1 mgpkakkkgk skkekeaklk aeallraqqe eeerlererl yrehleklea kyqgeresel
       61 aelnsleqkf lsaqqwkmdy reqakwehyl scdgtpdptv pqeintfmsl wrddqdediq
      121 lvmtkeevvl nlieklefll leaspeevtd kqrdqyqevi lqlqdllhqk yndatqnllk
      181 iasmyedset gnmhtvlkdk nitfciwvnl kkkarfkdhv fqeaghgfel pkslalssva
      241 vrvlhthydh lsplwvqcqg lprqeasdsm elaehpedtg qgpgeeeekg reepnvpaae
      301 eagskgrkes ftslketsnn tddiketeee trknsdildv psqeedallq eepggkeeap
      361 qvvdleqlvp vggvyhisal qlppqaqdvg dwtmvelldv glevypyspg eaedgtqeav
      421 qitlrlpdnv iyfkvpvlar wdpagqqwrt dgiskityea eeksitfsmg afytvallqd
      481 ghlnlpyqaw elhptgvdeg lftvtavfat iqiqikvseh ltagsakdnd walfmfsgek
      541 vqnlkltets eafseelkee sefhstlyhm lkdsasneam dkveragflf idsvyqllla
      601 trvlays
//
LOCUS       XP_041325545             531 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein intermediate chain CFAP94, axonemal isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325545
VERSION     XP_041325545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..531
                     /product="dynein intermediate chain CFAP94, axonemal
                     isoform X5"
                     /calculated_mol_wt=60666
     Region          45..215
                     /region_name="Casc1_N"
                     /note="Cancer susceptibility candidate 1 N-terminus;
                     pfam15927"
                     /db_xref="CDD:464947"
     CDS             1..531
                     /gene="DNAI7"
                     /coded_by="XM_041469611.1:162..1757"
                     /db_xref="GeneID:121354763"
ORIGIN      
        1 mgpkakkkgk skkekeaklk aeallraqqe eeerlererl yrehleklea kyqgeresel
       61 aelnsleqkf lsaqqwkmdy reqakwehyl scdgtpdptv pqeintfmsl wrddqdediq
      121 lvmtkeevvl nlieklefll leaspeevtd kqrdqyqevi lqlqdllhqk yndatqnllk
      181 iasmyedset gnmhtvlkdk nitfciwvnl kkkarfkdhv fqeaghgfel pkslalssva
      241 vrvlhthydh lsplwvqcqg lprqeasdsm elaehpedtg qgpgeeeekg reepnvpaae
      301 eagskgrkes ftslketsnn tddiketeee trknsdildv psqeedallq eepggkeeap
      361 qvvdleqlvp vggvyhisal qlppqaqdvg dwtmvelldv glevypyspg eaedgtqeav
      421 qitlrlpdnv iyfkvpvlar wdpagqqwrt dgiskityea eeksitfsmg afytvallqd
      481 ghlnlpyqaw elhptgvdeg lftvtavfat iqiqikwwkr rrcfptsqen g
//
LOCUS       XP_041325546             188 aa            linear   VRT 06-MAY-2021
DEFINITION  GTPase KRas [Pyrgilauda ruficollis].
ACCESSION   XP_041325546
VERSION     XP_041325546.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469612.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="GTPase KRas"
                     /calculated_mol_wt=21322
     Region          3..164
                     /region_name="H_N_K_Ras_like"
                     /note="Ras GTPase family containing H-Ras,N-Ras and
                     K-Ras4A/4B; cd04138"
                     /db_xref="CDD:133338"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133338"
     Site            order(11..12,59..60)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133338"
     Site            order(12..18,28..30,32,35,60,116..117,119..120,145..146)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133338"
     Site            order(17..18,30..32,34,37,40..41,54..55,57,59..61,63..65,
                     67,69..71,73,102..103,147)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:133338"
     Site            order(25,37..41)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:133338"
     Site            33..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133338"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133338"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133338"
     Site            59..77
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133338"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133338"
     Site            145..147
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133338"
     CDS             1..188
                     /gene="KRAS"
                     /coded_by="XM_041469612.1:254..820"
                     /db_xref="GeneID:121354764"
ORIGIN      
        1 mteyklvvvg aggvgksalt iqliqnhfvd eydptiedsy rkqvvidget clldildtag
       61 qeeysamrdq ymrtgegflc vfainntksf edihhyreqi krvkdsedvp mvlvgnkcdl
      121 psrtvdtkqa qdlarsygip fietsaktrq gvddafytlv reirkhkekm skdgkkkkkk
      181 tktkciim
//
LOCUS       XP_041325547             188 aa            linear   VRT 06-MAY-2021
DEFINITION  GTPase KRas [Pyrgilauda ruficollis].
ACCESSION   XP_041325547
VERSION     XP_041325547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469613.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="GTPase KRas"
                     /calculated_mol_wt=21322
     Region          3..164
                     /region_name="H_N_K_Ras_like"
                     /note="Ras GTPase family containing H-Ras,N-Ras and
                     K-Ras4A/4B; cd04138"
                     /db_xref="CDD:133338"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133338"
     Site            order(11..12,59..60)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133338"
     Site            order(12..18,28..30,32,35,60,116..117,119..120,145..146)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133338"
     Site            order(17..18,30..32,34,37,40..41,54..55,57,59..61,63..65,
                     67,69..71,73,102..103,147)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:133338"
     Site            order(25,37..41)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:133338"
     Site            33..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133338"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133338"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133338"
     Site            59..77
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133338"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133338"
     Site            145..147
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133338"
     CDS             1..188
                     /gene="KRAS"
                     /coded_by="XM_041469613.1:166..732"
                     /db_xref="GeneID:121354764"
ORIGIN      
        1 mteyklvvvg aggvgksalt iqliqnhfvd eydptiedsy rkqvvidget clldildtag
       61 qeeysamrdq ymrtgegflc vfainntksf edihhyreqi krvkdsedvp mvlvgnkcdl
      121 psrtvdtkqa qdlarsygip fietsaktrq gvddafytlv reirkhkekm skdgkkkkkk
      181 tktkciim
//
LOCUS       XP_041325548             188 aa            linear   VRT 06-MAY-2021
DEFINITION  GTPase KRas [Pyrgilauda ruficollis].
ACCESSION   XP_041325548
VERSION     XP_041325548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="GTPase KRas"
                     /calculated_mol_wt=21322
     Region          3..164
                     /region_name="H_N_K_Ras_like"
                     /note="Ras GTPase family containing H-Ras,N-Ras and
                     K-Ras4A/4B; cd04138"
                     /db_xref="CDD:133338"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133338"
     Site            order(11..12,59..60)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133338"
     Site            order(12..18,28..30,32,35,60,116..117,119..120,145..146)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133338"
     Site            order(17..18,30..32,34,37,40..41,54..55,57,59..61,63..65,
                     67,69..71,73,102..103,147)
                     /site_type="other"
                     /note="GEF interaction site [polypeptide binding]"
                     /db_xref="CDD:133338"
     Site            order(25,37..41)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:133338"
     Site            33..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133338"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133338"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133338"
     Site            59..77
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133338"
     Site            116..119
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133338"
     Site            145..147
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133338"
     CDS             1..188
                     /gene="KRAS"
                     /coded_by="XM_041469614.1:148..714"
                     /db_xref="GeneID:121354764"
ORIGIN      
        1 mteyklvvvg aggvgksalt iqliqnhfvd eydptiedsy rkqvvidget clldildtag
       61 qeeysamrdq ymrtgegflc vfainntksf edihhyreqi krvkdsedvp mvlvgnkcdl
      121 psrtvdtkqa qdlarsygip fietsaktrq gvddafytlv reirkhkekm skdgkkkkkk
      181 tktkciim
//
LOCUS       XP_041325549              86 aa            linear   VRT 06-MAY-2021
DEFINITION  electron transfer flavoprotein regulatory factor 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325549
VERSION     XP_041325549.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469615.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="electron transfer flavoprotein regulatory factor
                     1"
                     /calculated_mol_wt=10184
     Region          6..79
                     /region_name="Complex1_LYR_ETFRF1_LYRM5"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     electron transfer flavoprotein regulatory factor 1
                     (ETFRF1) and similar proteins; cd20265"
                     /db_xref="CDD:380760"
     CDS             1..86
                     /gene="ETFRF1"
                     /coded_by="XM_041469615.1:125..385"
                     /db_xref="GeneID:121354765"
ORIGIN      
        1 manslrgevi klyknllylg reypkgadyf rsrlkaaflk nkdetdpeki kqliargefv
       61 ikelealyfl rkyramkqry ysddkp
//
LOCUS       XP_041325550              86 aa            linear   VRT 06-MAY-2021
DEFINITION  electron transfer flavoprotein regulatory factor 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325550
VERSION     XP_041325550.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469616.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="electron transfer flavoprotein regulatory factor
                     1"
                     /calculated_mol_wt=10184
     Region          6..79
                     /region_name="Complex1_LYR_ETFRF1_LYRM5"
                     /note="LYR (leucine-tyrosine-arginine) motif found in
                     electron transfer flavoprotein regulatory factor 1
                     (ETFRF1) and similar proteins; cd20265"
                     /db_xref="CDD:380760"
     CDS             1..86
                     /gene="ETFRF1"
                     /coded_by="XM_041469616.1:198..458"
                     /db_xref="GeneID:121354765"
ORIGIN      
        1 manslrgevi klyknllylg reypkgadyf rsrlkaaflk nkdetdpeki kqliargefv
       61 ikelealyfl rkyramkqry ysddkp
//
LOCUS       XP_041325551             515 aa            linear   VRT 06-MAY-2021
DEFINITION  fatty acyl-CoA reductase 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325551
VERSION     XP_041325551.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469617.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="fatty acyl-CoA reductase 1-like"
                     /calculated_mol_wt=59208
     Region          11..330
                     /region_name="FAR-N_SDR_e"
                     /note="fatty acyl CoA reductases (FARs), extended (e)
                     SDRs; cd05236"
                     /db_xref="CDD:187547"
     Site            order(17,19..22,44..46,111..113,130,151..153,204,208,
                     229..232)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187547"
     Site            order(131,153,204,208)
                     /site_type="active"
                     /db_xref="CDD:187547"
     Site            order(153,204,231,243,259,265)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187547"
     Region          357..447
                     /region_name="Sterile"
                     /note="Male sterility protein; pfam03015"
                     /db_xref="CDD:460779"
     CDS             1..515
                     /gene="LOC121354766"
                     /coded_by="XM_041469617.1:62..1609"
                     /db_xref="GeneID:121354766"
ORIGIN      
        1 mssvsayyng ktvlitgatg fmgkvlvekl lrsspevkav yilvrpkagq smqervanml
       61 kckvfdrvre dcpnfhekik pinaeltqpk laisaedeee lltrvnvvfh caatvrfdep
      121 lkhalqlnvm gtqrllelar qmrnleafih istayancvr kcieeiiypp paepqklfdl
      181 vewldesiiq ditpkllgew pntytytkal seyliqqekg nlniaiirps ivgaswhepf
      241 pgwidnfngt sgifiaagkg ilrtvianne avadmipvdv ainltlaagw ytavhrpknl
      301 lvyncttggi npffwgemgq yvmstfkrnp leqafrtpna hmtssylinq ywitvshkap
      361 ailydlymrl tgrkprmmki inrlhksmtl lqyfstqswn wssdnmnmlm shlntedrkl
      421 ynfdvrqlhw seyiesycig akkyllnedm agipaakqhl rklrniryaf nttllviiwr
      481 ifiarsqmar niwyfvvslc ykflsyfras stlrh
//
LOCUS       XP_041325553             515 aa            linear   VRT 06-MAY-2021
DEFINITION  fatty acyl-CoA reductase 1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325553
VERSION     XP_041325553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523427.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..515
                     /product="fatty acyl-CoA reductase 1-like"
                     /calculated_mol_wt=59208
     Region          11..330
                     /region_name="FAR-N_SDR_e"
                     /note="fatty acyl CoA reductases (FARs), extended (e)
                     SDRs; cd05236"
                     /db_xref="CDD:187547"
     Site            order(17,19..22,44..46,111..113,130,151..153,204,208,
                     229..232)
                     /site_type="other"
                     /note="putative NAD(P) binding site [chemical binding]"
                     /db_xref="CDD:187547"
     Site            order(131,153,204,208)
                     /site_type="active"
                     /db_xref="CDD:187547"
     Site            order(153,204,231,243,259,265)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:187547"
     Region          357..447
                     /region_name="Sterile"
                     /note="Male sterility protein; pfam03015"
                     /db_xref="CDD:460779"
     CDS             1..515
                     /gene="LOC121354766"
                     /coded_by="XM_041469619.1:94..1641"
                     /db_xref="GeneID:121354766"
ORIGIN      
        1 mssvsayyng ktvlitgatg fmgkvlvekl lrsspevkav yilvrpkagq smqervanml
       61 kckvfdrvre dcpnfhekik pinaeltqpk laisaedeee lltrvnvvfh caatvrfdep
      121 lkhalqlnvm gtqrllelar qmrnleafih istayancvr kcieeiiypp paepqklfdl
      181 vewldesiiq ditpkllgew pntytytkal seyliqqekg nlniaiirps ivgaswhepf
      241 pgwidnfngt sgifiaagkg ilrtvianne avadmipvdv ainltlaagw ytavhrpknl
      301 lvyncttggi npffwgemgq yvmstfkrnp leqafrtpna hmtssylinq ywitvshkap
      361 ailydlymrl tgrkprmmki inrlhksmtl lqyfstqswn wssdnmnmlm shlntedrkl
      421 ynfdvrqlhw seyiesycig akkyllnedm agipaakqhl rklrniryaf nttllviiwr
      481 ifiarsqmar niwyfvvslc ykflsyfras stlrh
//
LOCUS       XP_041325554             166 aa            linear   VRT 06-MAY-2021
DEFINITION  5'-3' exonuclease PLD3-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041325554
VERSION     XP_041325554.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469620.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523439.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..166
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>166
                     /product="5'-3' exonuclease PLD3-like"
     Region          109..>166
                     /region_name="PLDc_SF"
                     /note="Catalytic domain of phospholipase D superfamily
                     proteins; cl15239"
                     /db_xref="CDD:472788"
     CDS             1..166
                     /gene="LOC121354768"
                     /coded_by="XM_041469620.1:<1..>499"
                     /codon_start=2
                     /db_xref="GeneID:121354768"
ORIGIN      
        1 apnspnlgap ptptshgnpw ewgwgdpgnf gvcfnpsspk lgvstpqiwa rsppqldpld
       61 rretpkrrph gaalfavlsi lflltfllll hprlrrradv tcgdscrivl vesipegmav
      121 gaapgpstfe awlellagat rsvdiasfyw tltngdtrth epsaaq
//
LOCUS       XP_041325555             374 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA repair protein RAD51 homolog 1, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325555
VERSION     XP_041325555.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469621.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>374
                     /product="DNA repair protein RAD51 homolog 1"
     Region          25..335
                     /region_name="recomb_RAD51"
                     /note="DNA repair protein RAD51; TIGR02239"
                     /db_xref="CDD:274048"
     CDS             1..374
                     /gene="RAD51"
                     /coded_by="XM_041469621.1:58..>1181"
                     /db_xref="GeneID:121354769"
ORIGIN      
        1 mamqmqleas adtsaeeesf gpqlisrleq cginandvkk leeagfhtve avayapkkel
       61 lnikgiseak adkilaeaak lvpmgfttat efhqrrseii qittgskeld kllqggietg
      121 sitelfgefr tgktqlchtl avtcqlpidr gggegkamyi dtegtfrper llavaerygl
      181 sgsdvldnva yargfntdhq tqllyqasam maesryalli vdsatalyrt dysgrgelsa
      241 rqmhlarflr mllrladefg vavvitnqvv aqvdgaamfa adpkkpiggn iiahasttrl
      301 ylrkgrgetr ickiydspcl peaeamfain adgvgghfpr qraqeavarr rgkrrdtpss
      361 aaalgnrsps gcgh
//
LOCUS       XP_041325556             835 aa            linear   VRT 06-MAY-2021
DEFINITION  bromo adjacent homology domain-containing 1 protein isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325556
VERSION     XP_041325556.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469622.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..835
                     /product="bromo adjacent homology domain-containing 1
                     protein isoform X1"
                     /calculated_mol_wt=91159
     Region          <375..>424
                     /region_name="GRH1"
                     /note="Peripheral Golgi membrane protein [Intracellular
                     trafficking and secretion]; COG5233"
                     /db_xref="CDD:227558"
     Region          681..788
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..835
                     /gene="BAHD1"
                     /coded_by="XM_041469622.1:319..2826"
                     /db_xref="GeneID:121354770"
ORIGIN      
        1 mtharkkqlf llkhpagsag qassptgsrr mdranaeqrd gdaseapncp sgfvgnnksk
       61 slrevrktyp lrrrllpsvs kktckvlltr ledvagslsk qtpsckkkhl pswveglgsa
      121 lfseqvqpvg agksdssgek ctvtypgpeq dfdpapsepr krrlaslnae avnnllferd
      181 dgllsgrrfr rdsgkaagdc alkglqgkas dnwpalekta vktgkgknrh epgqkcnsce
      241 hsldevfddg akredgaisy hptpkrlasl navaflklth ekdqplkqrs ksdgegksen
      301 hcskstlkwp kagrkncvkt kkevsslkmd gqhgwqgqtl gtlgkgeqrd ssrlygttep
      361 vpceslsgsy astegfyhrl pllmggqasm kpeygrpgek sptpkqefhq psfpvqqfpp
      421 lpvpgnhadc gclyessdlt plngfyvyyg qsgysgyspc siypkdelsq aatcegllvs
      481 sgslpsgahf qplhwcsspy ccgegaavss ysvcgvlhlp egrigsvhag rnsypykmpf
      541 aaegcksldq lnltipvagh paspahplsg cpvpsvppaa epvphlqtpn sdpqtmarec
      601 pqsskppsgs ksglrntpgc lhasnskaag ghshpkqqri srrratngwi pvgtacekav
      661 yvvnepepav rksyqaverd geiirvrdtv llksgprkks mpyvakisal wedpktgelm
      721 msllwyyrpe htqggrnpsm hqneifasrh qdensvacie ekcyvltfae ycrfcalakr
      781 rvegipgrkt imvppseeys tplhrkvped tdpelvflcr hvydfrhgri lknpq
//
LOCUS       XP_041325557             834 aa            linear   VRT 06-MAY-2021
DEFINITION  bromo adjacent homology domain-containing 1 protein isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325557
VERSION     XP_041325557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..834
                     /product="bromo adjacent homology domain-containing 1
                     protein isoform X2"
                     /calculated_mol_wt=91030
     Region          <375..>424
                     /region_name="GRH1"
                     /note="Peripheral Golgi membrane protein [Intracellular
                     trafficking and secretion]; COG5233"
                     /db_xref="CDD:227558"
     Region          680..787
                     /region_name="BAH_BAHCC1"
                     /note="BAH, or Bromo Adjacent Homology domain, as present
                     in mammalian BAHCC1 and similar proteins. BAHCC1 stands
                     for BAH domain and coiled-coil containing 1. BAH domains
                     are found in a variety of proteins playing roles in
                     transcriptional silencing and the...; cd04714"
                     /db_xref="CDD:240065"
     CDS             1..834
                     /gene="BAHD1"
                     /coded_by="XM_041469623.1:319..2823"
                     /db_xref="GeneID:121354770"
ORIGIN      
        1 mtharkkqlf llkhpagsag qassptgsrr mdranaeqrd gdaseapncp sgfvgnnksk
       61 slrevrktyp lrrrllpsvs kktckvlltr ledvagslsk qtpsckkkhl pswveglgsa
      121 lfseqvqpvg agksdssgek ctvtypgpeq dfdpapsepr krrlaslnae avnnllferd
      181 dgllsgrrfr rdsgkaagdc alkglqgkas dnwpalekta vktgkgknrh epgqkcnsce
      241 hsldevfddg akredgaisy hptpkrlasl navaflklth ekdqplkqrs ksdgegksen
      301 hcskstlkwp kagrkncvkt kkevsslkmd gqhgwqgqtl gtlgkgeqrd ssrlygttep
      361 vpceslsgsy astegfyhrl pllmggqasm kpeygrpgek sptpkqefhq psfpvqqfpp
      421 lpvpgnhadc gclyessdlt plngfyvyyg qsgysgyspc siypkdelsq aatcegllvs
      481 sgslpsgahf qplhwcsspy ccgegaavss ysvcgvlhlp egrigsvhag rnsypykmpf
      541 aagcksldql nltipvaghp aspahplsgc pvpsvppaae pvphlqtpns dpqtmarecp
      601 qsskppsgsk sglrntpgcl hasnskaagg hshpkqqris rrratngwip vgtacekavy
      661 vvnepepavr ksyqaverdg eiirvrdtvl lksgprkksm pyvakisalw edpktgelmm
      721 sllwyyrpeh tqggrnpsmh qneifasrhq densvaciee kcyvltfaey crfcalakrr
      781 vegipgrkti mvppseeyst plhrkvpedt dpelvflcrh vydfrhgril knpq
//
LOCUS       XP_041325558            1279 aa            linear   VRT 06-MAY-2021
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325558
VERSION     XP_041325558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1279
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X1"
                     /calculated_mol_wt=145975
     Region          12..141
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          149..367
                     /region_name="EFh_PI-PLC"
                     /note="EF-hand motif found in eukaryotic
                     phosphoinositide-specific phospholipase C (PI-PLC, EC
                     3.1.4.11) isozymes; cl28895"
                     /db_xref="CDD:333715"
     Region          149..178
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          182..210
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          220..249
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          266..367
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          379..715
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(395..396,425,427,442,476,529,531,641,668,670)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(395,442)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(396,425,427,476)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     Region          747..868
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(766,792,823,825,827,829)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     Region          958..999
                     /region_name="DUF1154"
                     /note="Protein of unknown function (DUF1154); pfam06631"
                     /db_xref="CDD:461969"
     Region          1051..1224
                     /region_name="PLC-beta_C"
                     /note="PLC-beta C terminal; pfam08703"
                     /db_xref="CDD:462571"
     CDS             1..1279
                     /gene="PLCB2"
                     /coded_by="XM_041469624.1:351..4190"
                     /db_xref="GeneID:121354771"
ORIGIN      
        1 msvlnpvlql tevkdylckg drfikwddet snaspvilrv dpqgfyvywt yqstereild
       61 itsirdtrtg rfakmpkslk lrevfnldhp ystfllknlt ivsgsdmvdl tfhnfvsyke
      121 sickdwaedi maiarnpity naprytflek ilvklklqln eegkipvrni fqmfpadkkr
      181 veealsachl pngkndainp edfpepvykt flmnlcprpe ideiftshhl kakpymtkdh
      241 lakfinkkqr dtrlndilfp pakpdqvqsl iekyepsgfn iqrgescsaq sscyrsgmte
      301 qkilclvpfc fpgeqsalfp qlpvvptnfs tskegpelfy lvtknssvcy agqlspegmv
      361 wflcgpennl ivldklmlyq dmtqplshyy insshntylt agqfsgtssp emyrqtllag
      421 crcveldcwk grppdeepii thgftmttei lfkdaieaia esafktspyp vilsfenhvd
      481 spkqqakmae ycrtifgdml lteplekypl kpgvplpspk dllrkilikn kknqsmsgkr
      541 qnslkkgrnm epetteqpas mdaedtvwag dvaeeepeee deqlrnldee eikkmqsdeg
      601 taglevtaye emsslvnyiq pikfnsfevs akknrsyvis sftetkacdl lskfpmqfve
      661 ynkwqmsriy pkgtrmdssn yqpqmfwnvg cqmvalnfqt mdvpmqqnma lfefngqcgy
      721 llkhefmrrp dkqfdpfsvd ridglvattv cvtvlsgqfl sdrsvktyve vellglprda
      781 krkhrtklts tansinpvwk eeafvfekim mpelaslkiv aweeggkfig qriipiiamh
      841 pgyhhvclrs esnmpltmpa lfvfleikdy vpdawadlti alsnpikffn lqdkrlvkhk
      901 dtsgerpgtq tnlssaetng vagstgkpsi ppsngstgaa vftkdeavle vmqmaepeti
      961 tlaelqqkkr flkllkrqek elrelewkgs kqreellqky sglfselacp ggkkrtirtr
     1021 ktqkkrsvtp sdagtsahpv kaadsidchw lvelrerlem dlihlgeehh nrirrkkeqh
     1081 ateqvarile larekqaael rvlrdtsesn ikdikkrmea krvervqaml rntsdkaaqe
     1141 rlkkeinnsh iqevvqtvkr vtektgrfqq kleekqaanl qsikeresql qqqvrveyee
     1201 klralnmevq emvknytkas fpgepqtrke agqsipegeq gstdqlegnt pvaevsrltl
     1261 amtqplgagm dveieesif
//
LOCUS       XP_041325559            1279 aa            linear   VRT 06-MAY-2021
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325559
VERSION     XP_041325559.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469625.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1279
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X1"
                     /calculated_mol_wt=145975
     Region          12..141
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          149..367
                     /region_name="EFh_PI-PLC"
                     /note="EF-hand motif found in eukaryotic
                     phosphoinositide-specific phospholipase C (PI-PLC, EC
                     3.1.4.11) isozymes; cl28895"
                     /db_xref="CDD:333715"
     Region          149..178
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          182..210
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          220..249
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          266..367
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          379..715
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(395..396,425,427,442,476,529,531,641,668,670)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(395,442)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(396,425,427,476)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     Region          747..868
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(766,792,823,825,827,829)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     Region          958..999
                     /region_name="DUF1154"
                     /note="Protein of unknown function (DUF1154); pfam06631"
                     /db_xref="CDD:461969"
     Region          1051..1224
                     /region_name="PLC-beta_C"
                     /note="PLC-beta C terminal; pfam08703"
                     /db_xref="CDD:462571"
     CDS             1..1279
                     /gene="PLCB2"
                     /coded_by="XM_041469625.1:165..4004"
                     /db_xref="GeneID:121354771"
ORIGIN      
        1 msvlnpvlql tevkdylckg drfikwddet snaspvilrv dpqgfyvywt yqstereild
       61 itsirdtrtg rfakmpkslk lrevfnldhp ystfllknlt ivsgsdmvdl tfhnfvsyke
      121 sickdwaedi maiarnpity naprytflek ilvklklqln eegkipvrni fqmfpadkkr
      181 veealsachl pngkndainp edfpepvykt flmnlcprpe ideiftshhl kakpymtkdh
      241 lakfinkkqr dtrlndilfp pakpdqvqsl iekyepsgfn iqrgescsaq sscyrsgmte
      301 qkilclvpfc fpgeqsalfp qlpvvptnfs tskegpelfy lvtknssvcy agqlspegmv
      361 wflcgpennl ivldklmlyq dmtqplshyy insshntylt agqfsgtssp emyrqtllag
      421 crcveldcwk grppdeepii thgftmttei lfkdaieaia esafktspyp vilsfenhvd
      481 spkqqakmae ycrtifgdml lteplekypl kpgvplpspk dllrkilikn kknqsmsgkr
      541 qnslkkgrnm epetteqpas mdaedtvwag dvaeeepeee deqlrnldee eikkmqsdeg
      601 taglevtaye emsslvnyiq pikfnsfevs akknrsyvis sftetkacdl lskfpmqfve
      661 ynkwqmsriy pkgtrmdssn yqpqmfwnvg cqmvalnfqt mdvpmqqnma lfefngqcgy
      721 llkhefmrrp dkqfdpfsvd ridglvattv cvtvlsgqfl sdrsvktyve vellglprda
      781 krkhrtklts tansinpvwk eeafvfekim mpelaslkiv aweeggkfig qriipiiamh
      841 pgyhhvclrs esnmpltmpa lfvfleikdy vpdawadlti alsnpikffn lqdkrlvkhk
      901 dtsgerpgtq tnlssaetng vagstgkpsi ppsngstgaa vftkdeavle vmqmaepeti
      961 tlaelqqkkr flkllkrqek elrelewkgs kqreellqky sglfselacp ggkkrtirtr
     1021 ktqkkrsvtp sdagtsahpv kaadsidchw lvelrerlem dlihlgeehh nrirrkkeqh
     1081 ateqvarile larekqaael rvlrdtsesn ikdikkrmea krvervqaml rntsdkaaqe
     1141 rlkkeinnsh iqevvqtvkr vtektgrfqq kleekqaanl qsikeresql qqqvrveyee
     1201 klralnmevq emvknytkas fpgepqtrke agqsipegeq gstdqlegnt pvaevsrltl
     1261 amtqplgagm dveieesif
//
LOCUS       XP_041325560            1265 aa            linear   VRT 06-MAY-2021
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325560
VERSION     XP_041325560.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469626.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1265
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1265
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X2"
                     /calculated_mol_wt=144209
     Region          15..127
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          135..353
                     /region_name="EFh_PI-PLC"
                     /note="EF-hand motif found in eukaryotic
                     phosphoinositide-specific phospholipase C (PI-PLC, EC
                     3.1.4.11) isozymes; cl28895"
                     /db_xref="CDD:333715"
     Region          135..164
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          168..196
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          206..235
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          252..353
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          365..701
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(381..382,411,413,428,462,515,517,627,654,656)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(381,428)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(382,411,413,462)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     Region          733..854
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(752,778,809,811,813,815)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     Region          944..985
                     /region_name="DUF1154"
                     /note="Protein of unknown function (DUF1154); pfam06631"
                     /db_xref="CDD:461969"
     Region          1037..1210
                     /region_name="PLC-beta_C"
                     /note="PLC-beta C terminal; pfam08703"
                     /db_xref="CDD:462571"
     CDS             1..1265
                     /gene="PLCB2"
                     /coded_by="XM_041469626.1:19..3816"
                     /db_xref="GeneID:121354771"
ORIGIN      
        1 mslfthsavl lsrvetsnas pvilrvdpqg fyvywtyqst ereilditsi rdtrtgrfak
       61 mpkslklrev fnldhpystf llknltivsg sdmvdltfhn fvsykesick dwaedimaia
      121 rnpitynapr ytflekilvk lklqlneegk ipvrnifqmf padkkrveea lsachlpngk
      181 ndainpedfp epvyktflmn lcprpeidei ftshhlkakp ymtkdhlakf inkkqrdtrl
      241 ndilfppakp dqvqslieky epsgfniqrg escsaqsscy rsgmteqkil clvpfcfpge
      301 qsalfpqlpv vptnfstske gpelfylvtk nssvcyagql spegmvwflc gpennlivld
      361 klmlyqdmtq plshyyinss hntyltagqf sgtsspemyr qtllagcrcv eldcwkgrpp
      421 deepiithgf tmtteilfkd aieaiaesaf ktspypvils fenhvdspkq qakmaeycrt
      481 ifgdmlltep lekyplkpgv plpspkdllr kiliknkknq smsgkrqnsl kkgrnmepet
      541 teqpasmdae dtvwagdvae eepeeedeql rnldeeeikk mqsdegtagl evtayeemss
      601 lvnyiqpikf nsfevsakkn rsyvissfte tkacdllskf pmqfveynkw qmsriypkgt
      661 rmdssnyqpq mfwnvgcqmv alnfqtmdvp mqqnmalfef ngqcgyllkh efmrrpdkqf
      721 dpfsvdridg lvattvcvtv lsgqflsdrs vktyvevell glprdakrkh rtkltstans
      781 inpvwkeeaf vfekimmpel aslkivawee ggkfigqrii piiamhpgyh hvclrsesnm
      841 pltmpalfvf leikdyvpda wadltialsn pikffnlqdk rlvkhkdtsg erpgtqtnls
      901 saetngvags tgkpsippsn gstgaavftk deavlevmqm aepetitlae lqqkkrflkl
      961 lkrqekelre lewkgskqre ellqkysglf selacpggkk rtirtrktqk krsvtpsdag
     1021 tsahpvkaad sidchwlvel rerlemdlih lgeehhnrir rkkeqhateq varilelare
     1081 kqaaelrvlr dtsesnikdi kkrmeakrve rvqamlrnts dkaaqerlkk einnshiqev
     1141 vqtvkrvtek tgrfqqklee kqaanlqsik eresqlqqqv rveyeeklra lnmevqemvk
     1201 nytkasfpge pqtrkeagqs ipegeqgstd qlegntpvae vsrltlamtq plgagmdvei
     1261 eesif
//
LOCUS       XP_041325561            1253 aa            linear   VRT 06-MAY-2021
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325561
VERSION     XP_041325561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1253
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X3"
                     /calculated_mol_wt=142925
     Region          2..115
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          123..341
                     /region_name="EFh_PI-PLC"
                     /note="EF-hand motif found in eukaryotic
                     phosphoinositide-specific phospholipase C (PI-PLC, EC
                     3.1.4.11) isozymes; cl28895"
                     /db_xref="CDD:333715"
     Region          123..152
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          156..184
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          194..223
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          240..341
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320029"
     Region          353..689
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(369..370,399,401,416,450,503,505,615,642,644)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(369,416)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(370,399,401,450)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     Region          721..842
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(740,766,797,799,801,803)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     Region          932..973
                     /region_name="DUF1154"
                     /note="Protein of unknown function (DUF1154); pfam06631"
                     /db_xref="CDD:461969"
     Region          1025..1198
                     /region_name="PLC-beta_C"
                     /note="PLC-beta C terminal; pfam08703"
                     /db_xref="CDD:462571"
     CDS             1..1253
                     /gene="PLCB2"
                     /coded_by="XM_041469627.1:165..3926"
                     /db_xref="GeneID:121354771"
ORIGIN      
        1 mqetsnaspv ilrvdpqgfy vywtyqster eilditsird trtgrfakmp kslklrevfn
       61 ldhpystfll knltivsgsd mvdltfhnfv sykesickdw aedimaiarn pitynapryt
      121 flekilvklk lqlneegkip vrnifqmfpa dkkrveeals achlpngknd ainpedfpep
      181 vyktflmnlc prpeideift shhlkakpym tkdhlakfin kkqrdtrlnd ilfppakpdq
      241 vqsliekyep sgfniqrges csaqsscyrs gmteqkilcl vpfcfpgeqs alfpqlpvvp
      301 tnfstskegp elfylvtkns svcyagqlsp egmvwflcgp ennlivldkl mlyqdmtqpl
      361 shyyinsshn tyltagqfsg tsspemyrqt llagcrcvel dcwkgrppde epiithgftm
      421 tteilfkdai eaiaesafkt spypvilsfe nhvdspkqqa kmaeycrtif gdmllteple
      481 kyplkpgvpl pspkdllrki liknkknqsm sgkrqnslkk grnmepette qpasmdaedt
      541 vwagdvaeee peeedeqlrn ldeeeikkmq sdegtaglev tayeemsslv nyiqpikfns
      601 fevsakknrs yvissftetk acdllskfpm qfveynkwqm sriypkgtrm dssnyqpqmf
      661 wnvgcqmval nfqtmdvpmq qnmalfefng qcgyllkhef mrrpdkqfdp fsvdridglv
      721 attvcvtvls gqflsdrsvk tyvevellgl prdakrkhrt kltstansin pvwkeeafvf
      781 ekimmpelas lkivaweegg kfigqriipi iamhpgyhhv clrsesnmpl tmpalfvfle
      841 ikdyvpdawa dltialsnpi kffnlqdkrl vkhkdtsger pgtqtnlssa etngvagstg
      901 kpsippsngs tgaavftkde avlevmqmae petitlaelq qkkrflkllk rqekelrele
      961 wkgskqreel lqkysglfse lacpggkkrt irtrktqkkr svtpsdagts ahpvkaadsi
     1021 dchwlvelre rlemdlihlg eehhnrirrk keqhateqva rilelarekq aaelrvlrdt
     1081 sesnikdikk rmeakrverv qamlrntsdk aaqerlkkei nnshiqevvq tvkrvtektg
     1141 rfqqkleekq aanlqsiker esqlqqqvrv eyeeklraln mevqemvkny tkasfpgepq
     1201 trkeagqsip egeqgstdql egntpvaevs rltlamtqpl gagmdveiee sif
//
LOCUS       XP_041325562            1211 aa            linear   VRT 06-MAY-2021
DEFINITION  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325562
VERSION     XP_041325562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1211
                     /product="1-phosphatidylinositol 4,5-bisphosphate
                     phosphodiesterase beta-2 isoform X4"
                     /calculated_mol_wt=138588
     Region          12..141
                     /region_name="PH_14"
                     /note="PH domain; pfam17787"
                     /db_xref="CDD:465506"
     Region          149..299
                     /region_name="EFh_PI-PLCbeta2"
                     /note="EF-hand motif found in phosphoinositide
                     phospholipase C beta 2 (PI-PLC-beta2); cd16209"
                     /db_xref="CDD:320039"
     Region          149..178
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          182..211
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          220..249
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          266..299
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320039"
     Region          311..647
                     /region_name="PI-PLCc_beta2"
                     /note="Catalytic domain of metazoan
                     phosphoinositide-specific phospholipase C-beta2; cd08624"
                     /db_xref="CDD:176561"
     Site            order(327..328,357,359,374,408,461,463,573,600,602)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:176561"
     Site            order(327,374)
                     /site_type="active"
                     /note="catalytic site [active]"
                     /db_xref="CDD:176561"
     Site            order(328,357,359,408)
                     /site_type="other"
                     /note="Ca binding site [ion binding]"
                     /db_xref="CDD:176561"
     Region          679..800
                     /region_name="C2_PLC_like"
                     /note="C2 domain present in Phosphoinositide-specific
                     phospholipases C (PLC); cd00275"
                     /db_xref="CDD:175974"
     Site            order(698,724,755,757,759,761)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:175974"
     Region          890..931
                     /region_name="DUF1154"
                     /note="Protein of unknown function (DUF1154); pfam06631"
                     /db_xref="CDD:461969"
     Region          983..1156
                     /region_name="PLC-beta_C"
                     /note="PLC-beta C terminal; pfam08703"
                     /db_xref="CDD:462571"
     CDS             1..1211
                     /gene="PLCB2"
                     /coded_by="XM_041469628.1:351..3986"
                     /db_xref="GeneID:121354771"
ORIGIN      
        1 msvlnpvlql tevkdylckg drfikwddet snaspvilrv dpqgfyvywt yqstereild
       61 itsirdtrtg rfakmpkslk lrevfnldhp ystfllknlt ivsgsdmvdl tfhnfvsyke
      121 sickdwaedi maiarnpity naprytflek ilvklklqln eegkipvrni fqmfpadkkr
      181 veealsachl pngkndainp edfpepvykt flmnlcprpe ideiftshhl kakpymtkdh
      241 lakfinkkqr dtrlndilfp pakpdqvqsl iekyepsgfn iqrgqlspeg mvwflcgpen
      301 nlivldklml yqdmtqplsh yyinsshnty ltagqfsgts spemyrqtll agcrcveldc
      361 wkgrppdeep iithgftmtt eilfkdaiea iaesafktsp ypvilsfenh vdspkqqakm
      421 aeycrtifgd mlltepleky plkpgvplps pkdllrkili knkknqsmsg krqnslkkgr
      481 nmepetteqp asmdaedtvw agdvaeeepe eedeqlrnld eeeikkmqsd egtaglevta
      541 yeemsslvny iqpikfnsfe vsakknrsyv issftetkac dllskfpmqf veynkwqmsr
      601 iypkgtrmds snyqpqmfwn vgcqmvalnf qtmdvpmqqn malfefngqc gyllkhefmr
      661 rpdkqfdpfs vdridglvat tvcvtvlsgq flsdrsvkty vevellglpr dakrkhrtkl
      721 tstansinpv wkeeafvfek immpelaslk ivaweeggkf igqriipiia mhpgyhhvcl
      781 rsesnmpltm palfvfleik dyvpdawadl tialsnpikf fnlqdkrlvk hkdtsgerpg
      841 tqtnlssaet ngvagstgkp sippsngstg aavftkdeav levmqmaepe titlaelqqk
      901 krflkllkrq ekelrelewk gskqreellq kysglfsela cpggkkrtir trktqkkrsv
      961 tpsdagtsah pvkaadsidc hwlvelrerl emdlihlgee hhnrirrkke qhateqvari
     1021 lelarekqaa elrvlrdtse snikdikkrm eakrvervqa mlrntsdkaa qerlkkeinn
     1081 shiqevvqtv krvtektgrf qqkleekqaa nlqsikeres qlqqqvrvey eeklralnme
     1141 vqemvknytk asfpgepqtr keagqsipeg eqgstdqleg ntpvaevsrl tlamtqplga
     1201 gmdveieesi f
//
LOCUS       XP_041325563             371 aa            linear   VRT 06-MAY-2021
DEFINITION  isovaleryl-CoA dehydrogenase, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325563
VERSION     XP_041325563.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469629.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="isovaleryl-CoA dehydrogenase, mitochondrial"
                     /calculated_mol_wt=40349
     Region          1..368
                     /region_name="IVD"
                     /note="Isovaleryl-CoA dehydrogenase; cd01156"
                     /db_xref="CDD:173845"
     Site            order(72,76,80,119,145,168,222,229,232,235,347..348,
                     351..353)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:173845"
     Site            order(110,112..113,118..119,143,145,354,356)
                     /site_type="other"
                     /note="FAD binding site [chemical binding]"
                     /db_xref="CDD:173845"
     Site            231
                     /site_type="active"
                     /note="catalytic base [active]"
                     /db_xref="CDD:173845"
     CDS             1..371
                     /gene="IVD"
                     /coded_by="XM_041469629.1:35..1150"
                     /db_xref="GeneID:121354772"
ORIGIN      
        1 mtkfcqehla pkaqqidqen efkgmrdfwk klgelgvlgi tapaeyggsa lgyldhvlvm
       61 eeisrasasv glsygahsnl cinqlvrngn eaqkhkylpk lisgehigal amsepnagsd
      121 vvsmklkadk kgdffvlngn kfwitngpda dvlivyaktd mnavpasqgi tafivergmp
      181 gfrtaqkldk lgmrgsntce lifedckvpa envlgtlskg vyvlmsgldl erlvlsggpl
      241 glmqavldha ipylhvreaf gqkighfqlm qgkmadmytr lmacrqyvyn vakacdqghf
      301 nakdcagvil ysaecatqva ldgiqclggn gyindypmgr flrdaklyei gagtsevrrl
      361 vigrafnatf k
//
LOCUS       XP_041325564            1477 aa            linear   VRT 06-MAY-2021
DEFINITION  protein dispatched homolog 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325564
VERSION     XP_041325564.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469630.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1477
                     /product="protein dispatched homolog 2"
                     /calculated_mol_wt=165553
     Region          <513..1135
                     /region_name="MMPL"
                     /note="Predicted exporter protein, RND superfamily
                     [General function prediction only]; COG1033"
                     /db_xref="CDD:440656"
     CDS             1..1477
                     /gene="DISP2"
                     /coded_by="XM_041469630.1:1..4434"
                     /db_xref="GeneID:121354773"
ORIGIN      
        1 metapvpppr eprpegtrrg rdpasprekq nagpcqtcla mpeignaels ysgtswekic
       61 pvhhcpipas pglgednlps sshtlgpvst qsngqvpsss qdsqqhhpyy pcnqeesrgs
      121 yslpslpghg erpvlcshls sgdlvpashh easetpwkqw spgqrrpvqh hvvtvrhdka
      181 frmpksysql iaewplavlv lcsvvvaict vagllvgnlp dfseplmgfe prdtdigrkl
      241 ivwrniksht gykktlslsp yakkksyddl gigrgqkaaq geqaartrrm vetiygadgf
      301 fcgppeksys qlvfmsttag slwnlqaiqs mcqmeqdkir shvhfrdlcq rteaneccps
      361 wslgnyiavl ynrsscleit qgdishtlal lracapdyhr gvltpscigp eaarqkhsqc
      421 aqvpekctrf naiyqllhfl vdrdflspqt meyqvpslky sllflptrkg asmmgiyldn
      481 letwdlfdny tsitgmdlgl kqklfqhyll ldtkypvlai laiflcvsfy lrsvfitlmv
      541 llavvsslmi syflykvafr ftyfpfvnlt aviilssica nhtfvffdlw nlsksqnpsa
      601 glaqwvsqtm hhfaylmlas cfttgaafya syisnitair cfavymgtsv lvnlvfmmtw
      661 lpssavlyer yiattciykp eaywnnsshk rvalsvhyil ralqntlset skllfekllp
      721 cgvikfryiw icwfaalaig gayiscsnpk lklptletss vqvfrlshpf erydseychq
      781 fmferlehge gqrmpvtivw gilpvdngdh fnpksngtlv tdttftiqnp daqkwllefc
      841 qkvknktfyy pdaeqkstvc fteeflrwmn srqcsqrdhs fnlccnqfsf pyrsevflhc
      901 ikmmlleegr egaetydlgl rfdgegnvaa lvlqfqtiyh ytfnysrakq fyeeislwit
      961 eemktapvgl qngwftskle lynlqhslst etmvvmglsi aisfvvlllt twnvllsvfs
     1021 vtaiagtvlv ttgllvllew qlnaveslfi saavglsvdf tvnycisyhl cphsdrlsrv
     1081 afslkqmsca tamaasalfs agvimlpatv layrklgifi mminciscgf aslffqslcc
     1141 ffgpekncgq ilwpcahtmk dysddsgpng nfacggsekq nrlrkvqesn taneqyelqp
     1201 lsrklsdsfd nststsklsn rpsvlsediq vednrcprvg mhpslererq slqdtlgdqq
     1261 vslcqcpalq tsspykhsts eteihrerlc rdcrcrkygl kawdgsgldd iqpagmkeeg
     1321 qlnksqcssd taqqqsdyts dhsplpaadi ykihrclcsl gssfdmlnis setsisdfeq
     1381 glklaesass cpdalelsds ygnaergyln gkrdtlrldl retvfdvspa asqqnssswk
     1441 nrfglgnegp vvlpnsqpdm pdvwikrssa qssgyns
//
LOCUS       XP_041325565             645 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 9B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325565
VERSION     XP_041325565.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469631.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..645
                     /product="coiled-coil domain-containing protein 9B isoform
                     X1"
                     /calculated_mol_wt=70888
     Region          <7..91
                     /region_name="SLD3"
                     /note="DNA replication regulator SLD3; pfam08639"
                     /db_xref="CDD:400803"
     Region          199..376
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..645
                     /gene="CCDC9B"
                     /coded_by="XM_041469631.1:219..2156"
                     /db_xref="GeneID:121354775"
ORIGIN      
        1 msnmnradaa vddavlrkke qkdveldkki lalrkkneal irryqeieed kkraeqegma
       61 vtsrrpkqdg ltititkahn dlkdaitqte hygqdspals mdkrvvsekw gspcptspgf
      121 gigseeeeee eeadhmftfr mgkrmqlavt mdnkakgkri vsekrtesfp gpgrvpdlse
      181 eemdhlvafr rgrrmqiait mdnkekgeer rtaekrrsds drgpesehsr kdggkpvqks
      241 pgdvsfpmtg rerseyirwk rerdqidler larhknakge wrrawdveks ehmfeedfvk
      301 dgepaldnps skkggrnark fqhrsfpadg rggghhgvnv sdpgpkavla vssrakgkdr
      361 ltgrarrwda kegedmslvk ddldgqrslg mdrqksrgde gveenctael eekgkqpslq
      421 dhgasssqql rsgkvqpaqn gqkeeqrgvr gcstevsvas agdsepgpkp skenvgedan
      481 gkpgtadvsw eestdstasq sslqntlqgt rpgsketlsl pmgmnvdgag lekqpaseqe
      541 csenssnsqg gkldtaagdr ldadqgqlvs rggeevthss alegqalelr gsedaegteh
      601 hkpsppgkas sdkavepeqd taksqsgegd qredckdkds gdthn
//
LOCUS       XP_041325566             624 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 9B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325566
VERSION     XP_041325566.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469632.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="coiled-coil domain-containing protein 9B isoform
                     X2"
                     /calculated_mol_wt=68585
     Region          178..355
                     /region_name="DUF4594"
                     /note="Domain of unknown function (DUF4594); pfam15266"
                     /db_xref="CDD:464604"
     CDS             1..624
                     /gene="CCDC9B"
                     /coded_by="XM_041469632.1:219..2093"
                     /db_xref="GeneID:121354775"
ORIGIN      
        1 msnmnradaa vddavlrkke qkdveldkki lalrkkneal irryqeieed kkraeqegma
       61 vtsrrpkqdg ltititkahn dkrvvsekwg spcptspgfg igseeeeeee eadhmftfrm
      121 gkrmqlavtm dnkakgkriv sekrtesfpg pgrvpdlsee emdhlvafrr grrmqiaitm
      181 dnkekgeerr taekrrsdsd rgpesehsrk dggkpvqksp gdvsfpmtgr erseyirwkr
      241 erdqidlerl arhknakgew rrawdvekse hmfeedfvkd gepaldnpss kkggrnarkf
      301 qhrsfpadgr ggghhgvnvs dpgpkavlav ssrakgkdrl tgrarrwdak egedmslvkd
      361 dldgqrslgm drqksrgdeg veenctaele ekgkqpslqd hgasssqqlr sgkvqpaqng
      421 qkeeqrgvrg cstevsvasa gdsepgpkps kenvgedang kpgtadvswe estdstasqs
      481 slqntlqgtr pgsketlslp mgmnvdgagl ekqpaseqec senssnsqgg kldtaagdrl
      541 dadqgqlvsr ggeevthssa legqalelrg sedaegtehh kpsppgkass dkavepeqdt
      601 aksqsgegdq redckdkdsg dthn
//
LOCUS       XP_041325567             361 aa            linear   VRT 06-MAY-2021
DEFINITION  prolactin-releasing peptide receptor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325567
VERSION     XP_041325567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..361
                     /product="prolactin-releasing peptide receptor-like"
                     /calculated_mol_wt=40887
     Region          30..316
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          30..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          63..85
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          102..124
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          145..161
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          192..215
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          245..267
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          284..309
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..361
                     /gene="LOC121354776"
                     /coded_by="XM_041469633.1:158..1243"
                     /db_xref="GeneID:121354776"
ORIGIN      
        1 maqlpndswh ndsaliftgl dlllelkplf iplyatlvvv acignlflvl lialtkklhc
       61 ttnflignla vadfimclac vpltvsyafe ergwlfgmfm chfvtllqaa tvfvsvlslt
      121 aiaidryvvv aypirrrisr racvglvaci wllsiaasvp tslhthyldl naighdmiic
      181 eefwkheere rllysclmll lsymlpllav sisfcaityh lrrrnvpgaa yhcqdkwart
      241 khktfrvlti svvcfavcwl plqvvnfird ideeftildk ryvnviqvsc hliamssacy
      301 npfiyaslhd kfwfhlssyf yrkkqssrsm sckasrfntc stladaptga sdkialqsrl
      361 p
//
LOCUS       XP_041325568             183 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 32 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325568
VERSION     XP_041325568.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469634.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="coiled-coil domain-containing protein 32 isoform
                     X1"
                     /calculated_mol_wt=20561
     Region          26..168
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..183
                     /gene="CCDC32"
                     /coded_by="XM_041469634.1:74..625"
                     /db_xref="GeneID:121354777"
ORIGIN      
        1 mripwndprm rmiesvdpav trsgedlwae icsclphpeh qdagdaftds fmdsyaqgsg
       61 sggssqpspk pwaplndsev ylaslerrlm rikglsqevt skdmlrtlsq akkecwdrfl
      121 qekfeaecyv eghdadestl ehlkrwlqpd kvaisseevq clippesqpe kpeaeeeppa
      181 aeq
//
LOCUS       XP_041325570             174 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 32 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325570
VERSION     XP_041325570.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469636.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="coiled-coil domain-containing protein 32 isoform
                     X2"
                     /calculated_mol_wt=19395
     Region          17..159
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..174
                     /gene="CCDC32"
                     /coded_by="XM_041469636.1:68..592"
                     /db_xref="GeneID:121354777"
ORIGIN      
        1 mrmiesvdpa vtrsgedlwa eicsclphpe hqdagdaftd sfmdsyaqgs gsggssqpsp
       61 kpwaplndse vylaslerrl mrikglsqev tskdmlrtls qakkecwdrf lqekfeaecy
      121 veghdadest lehlkrwlqp dkvaisseev qclippesqp ekpeaeeepp aaeq
//
LOCUS       XP_041325571             174 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 32 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325571
VERSION     XP_041325571.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469637.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="coiled-coil domain-containing protein 32 isoform
                     X2"
                     /calculated_mol_wt=19395
     Region          17..159
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..174
                     /gene="CCDC32"
                     /coded_by="XM_041469637.1:92..616"
                     /db_xref="GeneID:121354777"
ORIGIN      
        1 mrmiesvdpa vtrsgedlwa eicsclphpe hqdagdaftd sfmdsyaqgs gsggssqpsp
       61 kpwaplndse vylaslerrl mrikglsqev tskdmlrtls qakkecwdrf lqekfeaecy
      121 veghdadest lehlkrwlqp dkvaisseev qclippesqp ekpeaeeepp aaeq
//
LOCUS       XP_041325572             174 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 32 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325572
VERSION     XP_041325572.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469638.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..174
                     /product="coiled-coil domain-containing protein 32 isoform
                     X2"
                     /calculated_mol_wt=19395
     Region          17..159
                     /region_name="CCDC32"
                     /note="Coiled-coil domain containing 32; pfam14989"
                     /db_xref="CDD:464424"
     CDS             1..174
                     /gene="CCDC32"
                     /coded_by="XM_041469638.1:53..577"
                     /db_xref="GeneID:121354777"
ORIGIN      
        1 mrmiesvdpa vtrsgedlwa eicsclphpe hqdagdaftd sfmdsyaqgs gsggssqpsp
       61 kpwaplndse vylaslerrl mrikglsqev tskdmlrtls qakkecwdrf lqekfeaecy
      121 veghdadest lehlkrwlqp dkvaisseev qclippesqp ekpeaeeepp aaeq
//
LOCUS       XP_041325573             290 aa            linear   VRT 06-MAY-2021
DEFINITION  protein-L-isoaspartate(D-aspartate) O-methyltransferase-like
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325573
VERSION     XP_041325573.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469639.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..290
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..290
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase-like isoform X1"
                     /calculated_mol_wt=31403
     Region          67..263
                     /region_name="PCMT"
                     /note="Protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase (PCMT); pfam01135"
                     /db_xref="CDD:395902"
     CDS             1..290
                     /gene="LOC121354778"
                     /coded_by="XM_041469639.1:7..879"
                     /db_xref="GeneID:121354778"
ORIGIN      
        1 mlaeggrcpg rrrplpcpwd epaavrrrag thgaalrqdh gldiqrenar gagqqplqip
       61 aerseekgii ksqrvfdvll atdrghyiky fpymdspqsi gykatisaph mhahalellk
      121 dqlvegakal dvgsgsgylt acfarmtgpt gkavgvehik elvhesirnv qeddpallss
      181 grvklvvgdg rqgypeeapy daihvgaaaa avpkellkel kpggrlivpv gpeganqvlm
      241 qydktgdgri vetqlmgviy vpltdkekqw prcclwkkkn genslakqgg
//
LOCUS       XP_041325574             266 aa            linear   VRT 06-MAY-2021
DEFINITION  protein-L-isoaspartate(D-aspartate) O-methyltransferase-like
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325574
VERSION     XP_041325574.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469640.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase-like isoform X2"
                     /calculated_mol_wt=28739
     Region          29..236
                     /region_name="PCMT"
                     /note="Protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase (PCMT); pfam01135"
                     /db_xref="CDD:395902"
     CDS             1..266
                     /gene="LOC121354778"
                     /coded_by="XM_041469640.1:65..865"
                     /db_xref="GeneID:121354778"
ORIGIN      
        1 msqlpcgavl almgllfart mawtssgkth aelvnnlykk giiksqrvfd vllatdrghy
       61 ikyfpymdsp qsigykatis aphmhahale llkdqlvega kaldvgsgsg yltacfarmt
      121 gptgkavgve hikelvhesi rnvqeddpal lssgrvklvv gdgrqgypee apydaihvga
      181 aaaavpkell kelkpggrli vpvgpeganq vlmqydktgd grivetqlmg viyvpltdke
      241 kqwprcclwk kkngenslak qgvfsv
//
LOCUS       XP_041325575             240 aa            linear   VRT 06-MAY-2021
DEFINITION  small kinetochore-associated protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325575
VERSION     XP_041325575.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469641.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..240
                     /product="small kinetochore-associated protein"
                     /calculated_mol_wt=27499
     Region          71..>142
                     /region_name="PRK12704"
                     /note="phosphodiesterase; Provisional"
                     /db_xref="CDD:237177"
     CDS             1..240
                     /gene="KNSTRN"
                     /coded_by="XM_041469641.1:41..763"
                     /db_xref="GeneID:121354779"
ORIGIN      
        1 mdgqlsripv hsrlhrpeps aelqinfpsk rkcvsktsep elsvvpslhf asnvpadsvf
       61 kpanqglpkf ekkvepvskk avakrplsry qleaelknkn qlvetlkqql arregslklk
      121 elkkeneslv heveklkkiq etcmtilesr ninpgshiee ekemracrek tttltkkate
      181 dlmlfshraa kekemletam akwksaqeen qhtlekysdf qaeikewktm lealekllam
//
LOCUS       XP_041325576             491 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA pseudouridylate synthase domain-containing protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325576
VERSION     XP_041325576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="RNA pseudouridylate synthase domain-containing
                     protein 2"
                     /calculated_mol_wt=55008
     Region          135..317
                     /region_name="PseudoU_synth_ScRIB2"
                     /note="Pseudouridine synthases similar to Saccharomyces
                     cerevisiae RIB2; cd02557"
                     /db_xref="CDD:211331"
     Site            order(198..201,300)
                     /site_type="active"
                     /note="probable active site [active]"
                     /db_xref="CDD:211331"
     CDS             1..491
                     /gene="RPUSD2"
                     /coded_by="XM_041469642.1:11..1486"
                     /db_xref="GeneID:121354780"
ORIGIN      
        1 maepgagrar qeqpgpagde eaapapkkrr laggeryvpp prklnpgvsf gaehfaetsy
       61 yfegglrkvr pyyfdfrtyc kgrwvgrsll hvfgtefraq playyraaar agrlrlneep
      121 vrdldivlkn ndflrntvhr heppvtaqpi rilaedeevv vvdkpsslpv hpcgrfrhnt
      181 vifilgkehg lrelhtlhrl drmtsgvlmf aktaavskri deqvrqrqle keyvcrvvge
      241 fpehevvcee pilvvsykvg vcrvdpkgkp cqtlfqrlsy ngsssvvrcl prtgrthqir
      301 vhlqflghpi vndpiynmea wgpdrgkggk igktdeellk alveehrskq slevlgigee
      361 dlnsageskd tgnsgdctks aeadpvngss cpaedgkdpe rndvaacpln sdinletldk
      421 dkelslcgnq dgqagekgwe ekdplcvecr tsrrdpspke lvmflhalry kgadfeycss
      481 vpewamedwe q
//
LOCUS       XP_041325577             323 aa            linear   VRT 06-MAY-2021
DEFINITION  carbohydrate sulfotransferase 14 [Pyrgilauda ruficollis].
ACCESSION   XP_041325577
VERSION     XP_041325577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469643.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="carbohydrate sulfotransferase 14"
                     /calculated_mol_wt=37771
     Region          92..312
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; pfam03567"
                     /db_xref="CDD:427369"
     CDS             1..323
                     /gene="CHST14"
                     /coded_by="XM_041469643.1:54..1025"
                     /db_xref="GeneID:121354781"
ORIGIN      
        1 mlmfgvilas sglllmierg ilaqvgpppl hppagparrd grdspaelel evlrdtrnrt
       61 iralcgqrsm prsvwelppg qrrtvlrhll vsdkyrflyc yvpkvacsnw krilkvldga
      121 lesvdvqgkm dhksdlvflg dmkpeeisyr lkhyykfifv rnpmerllsa yrnkfgeike
      181 yqqkygveiv rryrknggns agddvtfsef lqylldedve rmnehwmpiy nlcqpcavry
      241 dfigsyerlh adanhvlehi qspsfvrfpe rqawykpvta etlhyylcnt qrrlirellp
      301 kyildfslfa yplpnitsef crq
//
LOCUS       XP_041325578              86 aa            linear   VRT 06-MAY-2021
DEFINITION  putative transmembrane protein INAFM2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325578
VERSION     XP_041325578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469644.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 7% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="putative transmembrane protein INAFM2"
                     /calculated_mol_wt=8831
     Region          30..62
                     /region_name="InaF-motif"
                     /note="TRP-interacting helix; pfam15018"
                     /db_xref="CDD:464449"
     CDS             1..86
                     /gene="INAFM2"
                     /coded_by="XM_041469644.1:152..412"
                     /db_xref="GeneID:121354783"
ORIGIN      
        1 mkekeagaer gkpatytgdk karmaaktnk kwvrlatvla yvlsvslaai vlavyysliw
       61 qpvrgsggss spgpgaaatp aqlraa
//
LOCUS       XP_041325579             684 aa            linear   VRT 06-MAY-2021
DEFINITION  mitotic checkpoint serine/threonine-protein kinase BUB1 beta
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325579
VERSION     XP_041325579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469645.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="mitotic checkpoint serine/threonine-protein
                     kinase BUB1 beta"
                     /calculated_mol_wt=77082
     Region          116..>212
                     /region_name="RNase_Y_N"
                     /note="RNase Y N-terminal region; pfam12072"
                     /db_xref="CDD:463456"
     Region          377..678
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(388..391,394,396,425,427,456,473..476,518,522..523,
                     525,546..547)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270931"
     CDS             1..684
                     /gene="BUB1B"
                     /coded_by="XM_041469645.1:1..2055"
                     /db_xref="GeneID:121354784"
ORIGIN      
        1 mrclalaala lsdgfscpar rwgrpdsagc pvpawgdasr rpraspavga srespplcpa
       61 gprlgsrlgc apaccnrswn cevhkahivn scffrtpcki epsincvlst rkpeeredpl
      121 qrvqhqqqda qakkemvmyc kekvyagvde fsfeeiraei yrkkarkkde deiqaierkk
      181 eeiqrkieel eqklkkkedn kqqqpheqaa evmgastplg lqgftfsstk ecgekqpqsq
      241 sefqvyedtq lhkpscsedv gllpppaavp ffsifdestt ltnqnispim etsledahss
      301 gasvsggsls svtqtsamky lqiseklela qslpaelvtd ddvaqilwsp eerkkllssv
      361 lsslaaspgf hleagalphm evekdvelgn etycikmeyw nneeykmffa iptgcifqwd
      421 akgfaikvys qpvpwdfyit lelqkrlnsd fdqsfsencs cylyqdgcai lhkdtncftl
      481 rdilhdrkfi tkeiiflvvh dllhvveklh kaeivhgdlr pevlflgdri cdafsneevp
      541 nalkvvdfsh sldlrllpqv slpynfptaq tphgqqllae sslpyqvdlv giadivhlll
      601 fgehiqvyqe nsiwkisqnf sktpdsdfws klferilnad gkstvpllre lreeisemfd
      661 ssfkerlllt laavgetfll vnfq
//
LOCUS       XP_041325581             693 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase PAK 6 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325581
VERSION     XP_041325581.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469647.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..693
                     /product="serine/threonine-protein kinase PAK 6 isoform
                     X1"
                     /calculated_mol_wt=77228
     Region          41..86
                     /region_name="CRIB_PAK_like"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd01093"
                     /db_xref="CDD:238526"
     Site            order(43,46,49,51,54,71,75)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238526"
     Region          397..693
                     /region_name="STKc_PAK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     p21-activated kinase 6; cd06659"
                     /db_xref="CDD:270821"
     Site            order(425..429,433,446,448,477,493..497,499..500,503,538,
                     540..543,545,555..556,559,572..576,578,605,614..616)
                     /site_type="active"
                     /db_xref="CDD:270821"
     Site            order(425..429,433,446,448,477,493..497,499..500,503,
                     542..543,545,555..556)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270821"
     Site            order(428..429,457,538,540..542,559,572..576,578,605,
                     614..616)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270821"
     Site            555..578
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270821"
     CDS             1..693
                     /gene="PAK6"
                     /coded_by="XM_041469647.1:13..2094"
                     /db_xref="GeneID:121354786"
ORIGIN      
        1 mtvgeftsrp ffllslgtvh hqhccsrtas imfrkkkkkr peisapqnfe hrvhtsfdpk
       61 egkfvglppq wqnildtlrr pkpvvdpsri trmqlqpmkt vvrgstveve gyisgllndi
      121 qklsaissnt lrgrsptsrr raqslgllgd erppdmylqs pegdwadkyg nylncnggsk
      181 varrqtmwpd yksrlegqsh pngmvtkaqs lgpsefqgad gsclqrtsgl pqvpavlges
      241 etamkspeeg wlqrqpsarp agegspssks renslkrrll rsvfplssss nkpgpplqik
      301 pnaffkpqqw gsphspaaka qslppdqpas efprmiseag tpqksptaek avavppgrps
      361 pagsprnrqt qtsssnlhlp qdsagkgqpa sedpvvvthe qfkaalrmvv dqgdprtlle
      421 nyikigegst givciarekh sgrqvavkmm dlrkqqrrel lfnevvimrd yqhvnvvemy
      481 ksylvgeelw vlmeflqgga ltdivsqirl neeqiatvce svlqalsylh sqgvihrdik
      541 sdsilltldg rvklsdfgfc aqiskdvpkr kslvgtpywm apeviaripy ttevdiwslg
      601 imviemvdge ppyfsdspvq amkrlrdspp pklknfhrts pvlrdflerm ltrdplerat
      661 aqelldhpfl lqtglpeclv pliqqyrkrt stc
//
LOCUS       XP_041325582             662 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase PAK 6 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325582
VERSION     XP_041325582.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469648.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..662
                     /product="serine/threonine-protein kinase PAK 6 isoform
                     X2"
                     /calculated_mol_wt=73782
     Region          10..55
                     /region_name="CRIB_PAK_like"
                     /note="PAK (p21 activated kinase) Binding Domain (PBD),
                     binds Cdc42p- and/or Rho-like small GTPases; also known as
                     the Cdc42/Rac interactive binding (CRIB) motif; has been
                     shown to inhibit transcriptional activation and cell
                     transformation mediated by the...; cd01093"
                     /db_xref="CDD:238526"
     Site            order(12,15,18,20,23,40,44)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238526"
     Region          366..662
                     /region_name="STKc_PAK6"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     p21-activated kinase 6; cd06659"
                     /db_xref="CDD:270821"
     Site            order(394..398,402,415,417,446,462..466,468..469,472,507,
                     509..512,514,524..525,528,541..545,547,574,583..585)
                     /site_type="active"
                     /db_xref="CDD:270821"
     Site            order(394..398,402,415,417,446,462..466,468..469,472,
                     511..512,514,524..525)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270821"
     Site            order(397..398,426,507,509..511,528,541..545,547,574,
                     583..585)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270821"
     Site            524..547
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270821"
     CDS             1..662
                     /gene="PAK6"
                     /coded_by="XM_041469648.1:107..2095"
                     /db_xref="GeneID:121354786"
ORIGIN      
        1 mfrkkkkkrp eisapqnfeh rvhtsfdpke gkfvglppqw qnildtlrrp kpvvdpsrit
       61 rmqlqpmktv vrgstveveg yisgllndiq klsaissntl rgrsptsrrr aqslgllgde
      121 rppdmylqsp egdwadkygn ylncnggskv arrqtmwpdy ksrlegqshp ngmvtkaqsl
      181 gpsefqgadg sclqrtsglp qvpavlgese tamkspeegw lqrqpsarpa gegspssksr
      241 enslkrrllr svfplssssn kpgpplqikp naffkpqqwg sphspaakaq slppdqpase
      301 fprmiseagt pqksptaeka vavppgrpsp agsprnrqtq tsssnlhlpq dsagkgqpas
      361 edpvvvtheq fkaalrmvvd qgdprtllen yikigegstg ivciarekhs grqvavkmmd
      421 lrkqqrrell fnevvimrdy qhvnvvemyk sylvgeelwv lmeflqggal tdivsqirln
      481 eeqiatvces vlqalsylhs qgvihrdiks dsilltldgr vklsdfgfca qiskdvpkrk
      541 slvgtpywma peviaripyt tevdiwslgi mviemvdgep pyfsdspvqa mkrlrdsppp
      601 klknfhrtsp vlrdflerml trdplerata qelldhpfll qtglpeclvp liqqyrkrts
      661 tc
//
LOCUS       XP_041325583            2147 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: kinetochore scaffold 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325583
VERSION     XP_041325583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469649.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523537.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2147
                     /product="LOW QUALITY PROTEIN: kinetochore scaffold 1"
                     /calculated_mol_wt=234124
     Region          97..152
                     /region_name="KNL1_NTD"
                     /note="N-terminal domain found in kinetochore scaffold 1
                     (KNL1) and similar proteins; cd21853"
                     /db_xref="CDD:439316"
     Site            order(101..105,134..147)
                     /site_type="other"
                     /note="PP1 binding site [polypeptide binding]"
                     /db_xref="CDD:439316"
     Region          220..241
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          504..526
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          1138..1162
                     /region_name="MELT"
                     /note="MELT motif; pfam19221"
                     /db_xref="CDD:466004"
     Region          1929..2039
                     /region_name="DRWD-N_Knl1"
                     /note="N-terminal double-RWD domain of kinetochore
                     scaffold 1 and related proteins; cd22817"
                     /db_xref="CDD:467642"
     Site            order(1958..1961,1991,1993..1995,2003,2006)
                     /site_type="other"
                     /note="Nsl1 interface [polypeptide binding]"
                     /db_xref="CDD:467642"
     Region          2046..2144
                     /region_name="DRWD-C_Knl1"
                     /note="C-terminal double-RWD domain of kinetochore
                     scaffold 1 and related proteins; cd22892"
                     /db_xref="CDD:467644"
     Site            order(2049,2052)
                     /site_type="other"
                     /note="Nsl1 interface [polypeptide binding]"
                     /db_xref="CDD:467644"
     CDS             1..2147
                     /gene="KNL1"
                     /coded_by="XM_041469649.1:1..6444"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121354787"
ORIGIN      
        1 mlygtggrhv aqsrpvrrqr vvxgagravg ferggggrga gtgagepetg igergapsrr
       61 egkyfvlyfi gkaypsamdk iytdpnvemd ntehirrkrl ssilkaprnp lddlgngnem
      121 tedihterrr rssrrvsfas tincrvfqrd lknstseten tgcsanekdd tltnqnedpe
      181 avpceitgmn tllhapiqal gqqtewrdvd haaprtdrqd ttllfseene memtashtav
      241 isrnlsthqp drtkkidfts flaklnssqe kaetskelsl lsdstnhpgp sleqreeata
      301 vrkidfnefl qrlksnnpae rhdkdnvccv psqgsgdvtq lsgefgyshe pldtcnvtrv
      361 frgreggmem tkceaadvki pfpgvneipa eqwecgdvtk afadqgmdvt tshtakvsfa
      421 lstvgnqsls fqkdfppkes dnsvfrrasn pslnvqqdpq lcanrktaga agrgarpvlr
      481 agkqeagtls aiqgsvsset ifrgdktvvf skcddmemtg nytdiiyeas steqnsschk
      541 tcekpvntnp llagsrslag gdipkglapg gnpaagtykn salelpsasg rhmenvsqac
      601 gpaaassgfg shfvasgalk srfdpsanpq lvfsgektvi fagedmdlak scvkdggenv
      661 dhehptavft satckphflg nrstpsnvte qeemeitrch tvffdgqssg itaeskqmpc
      721 kiiprknqnk nvsegdisay svemdkenve vrsidrstkr sqamgrndqd lqmimvgkkl
      781 gktsfqtsgl sscaksmcll qeqnrgvpen vvtnpsasls lqsqkvvsqp leknppslsd
      841 fctndttgmf lgdqsmditk ahpaafeiap inteqesnny nqntalskql qnqpfpfpsh
      901 gvdivsqtaa mecgdlkmnt nkqivaalap sgsfsfsnnp apsamrgneq sgtviginad
      961 gqkserqekp qpvraaskvl ptqgdsdkhf smgktgssre dlktplsahg llqrgaeepv
     1021 wartseapke ssqlsffgek savfphgedm dtigrcvvmv pdysirvvls qnkaapgcfg
     1081 qggdetmsle kgatttapae rggqeaacgr titfapaedm eittthsawh rqpvpaipad
     1141 ktivfahdqe dmditashtv avsknfcgfe aqqaphtntq qppqhmhsgl vpcrgemdss
     1201 qnatkpedkp sipssassds afpskkgaaq vpsgttahsi ysvslqestv daeapqdrgl
     1261 ptdnsvpvsk eqdltppekl qskgvtsefp skgpvdhree sgslgscvaf pmqgsdpwkg
     1321 hpdvlgtqrn qpveedssqp gdsdlglaga nlipaankes kkneelsaeg eappkdfqin
     1381 seqtrqplvr dssgdqmqtt lppaasgiig vcsklmgltr ksvsvsktas sdqlssssaq
     1441 pedtlslgkn tvseannffe pkkqentgle sgadpigmaa kdkypginip lgifqpklps
     1501 krnrvssaqd intksdkvea pvpantsetp gnkssrqnfs pfqfiaeefl pvcleemdsn
     1561 esvsselmen vwddknkkqi phsekdpfed tkpcsrkral eqteedpqsp kaakrdqhgd
     1621 agasqdlevt fdvvpqdqae vgeageppnl sakspgcpqa stsssldsvk adiestiqrs
     1681 sqvesqlltd siceenlwek fqsgaitvge fftllqvhvv iqkprhsqlp ascavsappt
     1741 aedliysqyi hrpklriyee dcqdlsqkie elkplvtvld qplvnvtrsl wevmrtctde
     1801 elskfgaeln kmkscftkea kilshneket lyrkllqsae eqyrklqsrm emvdewmeae
     1861 ssvaalesds fwdekeagcs agtaggqnlq eelqritaqe eellrelsem daederdlae
     1921 meklknterd cleilkkydf tewelmewsd qqavfnflyd svtltvvfgp piddeffaar
     1981 psrsivsldf esfldeeqap pssclvhkli fqfiesrgcw qkkcpklcyl pqalldislv
     2041 vnrckilgde leflqrwgak fqlletdikd tevkllfsss vafakfeltl alshdypsav
     2101 lpfrvqthig nigekevaav lsrvpvghhy lqravssihq nllqgpr
//
LOCUS       XP_041325584             224 aa            linear   VRT 06-MAY-2021
DEFINITION  RAC-beta serine/threonine-protein kinase-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325584
VERSION     XP_041325584.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469650.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523637.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 34% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..224
                     /product="RAC-beta serine/threonine-protein kinase-like"
                     /calculated_mol_wt=24636
     Region          <6..>61
                     /region_name="PRK15313"
                     /note="intestinal colonization autotransporter adhesin
                     MisL"
                     /db_xref="CDD:237940"
     Region          82..177
                     /region_name="PH_PKB"
                     /note="Protein Kinase B-like pleckstrin homology (PH)
                     domain; cd01241"
                     /db_xref="CDD:269947"
     Site            order(82..85,89,91,118..119,121,152)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:269947"
     CDS             1..224
                     /gene="LOC121354790"
                     /coded_by="XM_041469650.1:1..675"
                     /db_xref="GeneID:121354790"
ORIGIN      
        1 mdpitdpiad paidpitdpv idpvsdpvfa lvidpitdpv idpiidpivd pitdpvtdpv
       61 idpvndpiip pppvnpfpaa pgeyiktwrp ryfllksdgs fvgykerpes sehglpplnn
      121 fsvaecqlmr terprpntfv irclqwttvi ertfhvdtpq ereewiqaiq avanslksre
      181 papeppelrg spgdgedagr arskavsnpe ntpktsqnir pktp
//
LOCUS       XP_041325585             152 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 244 [Pyrgilauda ruficollis].
ACCESSION   XP_041325585
VERSION     XP_041325585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..152
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..152
                     /product="transmembrane protein 244"
                     /calculated_mol_wt=17265
     CDS             1..152
                     /gene="TMEM244"
                     /coded_by="XM_041469651.1:1..459"
                     /db_xref="GeneID:121354791"
ORIGIN      
        1 malkvktaet kvvlvnllic iivfytvyyv vlsvcfavfr ikmldglapf dfktnpswin
       61 pyylvlvisl eitfflcgll falvveewvw dyavtvtvih iiitsvvmse fplmlhwwla
      121 lgsgvismic ggqilayclf kdnfiypild df
//
LOCUS       XP_041325586            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325586
VERSION     XP_041325586.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469652.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X1"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469652.1:2149..6864"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325587            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325587
VERSION     XP_041325587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469653.1:2132..6847"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325588            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325588
VERSION     XP_041325588.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469654.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469654.1:2128..6843"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325589            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325589
VERSION     XP_041325589.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469655.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469655.1:2186..6901"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325590            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325590
VERSION     XP_041325590.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469656.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469656.1:2176..6891"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325591            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325591
VERSION     XP_041325591.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469657.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469657.1:2167..6882"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325593            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325593
VERSION     XP_041325593.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469659.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469659.1:2139..6854"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325594            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325594
VERSION     XP_041325594.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469660.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469660.1:2156..6871"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325595            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325595
VERSION     XP_041325595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="tubby-related protein 4 isoform X2"
                     /calculated_mol_wt=170898
     Region          <45..217
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          85..123
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          129..166
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          171..205
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          213..282
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          289..338
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(373..378,384,391,398)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          375..409
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          1166..>1339
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1494..1564
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1571
                     /gene="TULP4"
                     /coded_by="XM_041469661.1:2115..6830"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 myaavehgpv lcsdsnilcl swkgrvpkse kekpvcrrry yeegwlatgn grgvvgvtft
       61 sshcrrdrnt pqrinfnlrg hnsevvlvrw nepfqklatc dadggifvwi qyegrwsvel
      121 vndrgaqvsd ftwshdgtqa lisyrdgfvl vgsvsgqrhw sseinlesqi tcgiwtpddq
      181 qvlfgtadgq vivmdchgrm lahvllhesd gilnmswnyp sflvedsses dtdsddyspp
      241 qdgpaaypvp vqntkplltv sftsgdislm nnyddlspti ihsglkdvvv qwctqgdlla
      301 vagmekqsql vdlsngsllk salvkfynvr gehiytletp vqrpiisicw ghrdsrllma
      361 sgpalyvvrv ehrvsslqll cqqtiasclr ddkdiskltl pprlcsyltt afiptikppi
      421 pdpnnmrdfv syptagnerl hctmkrtedd pevggpcytl yleylgglvp ilkgrriskl
      481 rpefvimdpk tdgkadeiyg nslistvids cncsdssdie lsddwaakks pkisrasksp
      541 klpriniear kspkmsraaq eisrsprlpi rkpsigspsl trrefpledi tqhnylaqvt
      601 sniwgtkfki vglaaflptn lgaviyktsl lhlqprqmti ylpevrkism dyinmpvfnp
      661 nvfsededdl pvpgapgapa ssppctvnip iapihssaqa msptqsiglv qsllanqnvq
      721 ldvlanppae aggegpgpfp gapsrfpgpg agalavgelg rppppplapp ppappaiala
      781 dlrdhgdreh epppkakapr pgpplvegda vifgaaqelq lnkmnppppy pgtipaepaa
      841 plppppgppq ppldlclkkg efslypaghy qtplgyerit tfdssgnvee vcrprtrmlc
      901 aqstytlpgp gssatlrita aekkmqqpca satlnrltvp rysipagdpp pypdiasqls
      961 qgrsmaqrld ssiihatlrr nsreaalkma qlmdgqratl qlppkaksni vsaqyqqrvp
     1021 talytcsqcs sggagsssta saggagnias gnagsstssi ggmrpdlsag sgsqhssvia
     1081 hsvstsplvs qssysllspp dnsrdradyi nsaftedeal sqhcpveksv rhvpvsltea
     1141 tlsvkrpppy qwdpmvseei wvpqertsqs svpnplkppp liigqaqhld msrvpfvspk
     1201 sptsptatfq tsygvgvpyp gsysapplqg mqapcspkea laptqfaqqe ptvvlqpgys
     1261 snlpycplpp mypgsstcss lqlppialhp wssysacppv qnpqgtlppk pllvvekpvm
     1321 spppaelqgh vgtevmveta dtfqevlslt espvpqrtdk fgkksrkrld sraeegnvqa
     1381 itegkvkkea rtltdfnsli asprlgrekk kvksqkdqlk skklnktnef qdssesepel
     1441 fisgdelmnq sqgskkgwkt krslrtasel defkcrkase kedgrlgsqg fvyvmankqp
     1501 lwneatqvyq ldfggrvtqe saknfqiele grqvmqfgri dgnayildfq ypfsavqafa
     1561 valanvtqrl k
//
LOCUS       XP_041325596            1378 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325596
VERSION     XP_041325596.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469662.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1378
                     /product="tubby-related protein 4 isoform X3"
                     /calculated_mol_wt=149149
     Site            order(180..185,191,198,205)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          182..216
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          973..>1146
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1301..1371
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1378
                     /gene="TULP4"
                     /coded_by="XM_041469662.1:583..4719"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 mdchgrmlah vllhesdgil nmswnypsfl vedssesdtd sddysppqdg paaypvpvqn
       61 tkplltvsft sgdislmnny ddlsptiihs glkdvvvqwc tqgdllavag mekqsqlvdl
      121 sngsllksal vkfynvrgeh iytletpvqr piisicwghr dsrllmasgp alyvvrvehr
      181 vsslqllcqq tiasclrddk diskltlppr lcsylttafi ptikppipdp nnmrdfvsyp
      241 tagnerlhct mkrteddpev ggpcytlyle ylgglvpilk grrisklrpe fvimdpktdg
      301 kadeiygnsl istvidscnc sdssdielsd dwaakkspki sraskspklp riniearksp
      361 kmsraaqeis rsprlpirkp sigspsltrr efpleditqh nylaqvtsni wgtkfkivgl
      421 aaflptnlga viyktsllhl qprqmtiylp evrkismdyi nmpvfnpnvf sededdlpvp
      481 gapgapassp pctvnipiap ihssaqamsp tqsiglvqsl lanqnvqldv lanppaeagg
      541 egpgpfpgap srfpgpgaga lavgelgrpp ppplappppa ppaialadlr dhgdrehepp
      601 pkakaprpgp plvegdavif gaaqelqlnk mnppppypgt ipaepaaplp pppgppqppl
      661 dlclkkgefs lypaghyqtp lgyerittfd ssgnveevcr prtrmlcaqs tytlpgpgss
      721 atlritaaek kmqqpcasat lnrltvprys ipagdpppyp diasqlsqgr smaqrldssi
      781 ihatlrrnsr eaalkmaqlm dgqratlqlp pkaksnivsa qyqqrvptal ytcsqcssgg
      841 agssstasag gagniasgna gsstssiggm rpdlsagsgs qhssviahsv stsplvsqss
      901 ysllsppdns rdradyinsa ftedealsqh cpveksvrhv pvslteatls vkrpppyqwd
      961 pmvseeiwvp qertsqssvp nplkppplii gqaqhldmsr vpfvspkspt sptatfqtsy
     1021 gvgvpypgsy sapplqgmqa pcspkealap tqfaqqeptv vlqpgyssnl pycplppmyp
     1081 gsstcsslql ppialhpwss ysacppvqnp qgtlppkpll vvekpvmspp paelqghvgt
     1141 evmvetadtf qevlsltesp vpqrtdkfgk ksrkrldsra eegnvqaite gkvkkeartl
     1201 tdfnsliasp rlgrekkkvk sqkdqlkskk lnktnefqds sesepelfis gdelmnqsqg
     1261 skkgwktkrs lrtaseldef kcrkaseked grlgsqgfvy vmankqplwn eatqvyqldf
     1321 ggrvtqesak nfqielegrq vmqfgridgn ayildfqypf savqafaval anvtqrlk
//
LOCUS       XP_041325597            1378 aa            linear   VRT 06-MAY-2021
DEFINITION  tubby-related protein 4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325597
VERSION     XP_041325597.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469663.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1378
                     /product="tubby-related protein 4 isoform X3"
                     /calculated_mol_wt=149149
     Site            order(180..185,191,198,205)
                     /site_type="active"
                     /note="elongin B/C interaction [active]"
                     /db_xref="CDD:239641"
     Region          182..216
                     /region_name="SOCS_box"
                     /note="The SOCS box acts as a bridge between specific
                     substrate- binding domains and more generic proteins that
                     comprise a large family of E3 ubiquitin protein ligases;
                     smart00969"
                     /db_xref="CDD:198037"
     Region          973..>1146
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          <1301..1371
                     /region_name="Tub"
                     /note="Tub family; pfam01167"
                     /db_xref="CDD:460094"
     CDS             1..1378
                     /gene="TULP4"
                     /coded_by="XM_041469663.1:334..4470"
                     /db_xref="GeneID:121354792"
ORIGIN      
        1 mdchgrmlah vllhesdgil nmswnypsfl vedssesdtd sddysppqdg paaypvpvqn
       61 tkplltvsft sgdislmnny ddlsptiihs glkdvvvqwc tqgdllavag mekqsqlvdl
      121 sngsllksal vkfynvrgeh iytletpvqr piisicwghr dsrllmasgp alyvvrvehr
      181 vsslqllcqq tiasclrddk diskltlppr lcsylttafi ptikppipdp nnmrdfvsyp
      241 tagnerlhct mkrteddpev ggpcytlyle ylgglvpilk grrisklrpe fvimdpktdg
      301 kadeiygnsl istvidscnc sdssdielsd dwaakkspki sraskspklp riniearksp
      361 kmsraaqeis rsprlpirkp sigspsltrr efpleditqh nylaqvtsni wgtkfkivgl
      421 aaflptnlga viyktsllhl qprqmtiylp evrkismdyi nmpvfnpnvf sededdlpvp
      481 gapgapassp pctvnipiap ihssaqamsp tqsiglvqsl lanqnvqldv lanppaeagg
      541 egpgpfpgap srfpgpgaga lavgelgrpp ppplappppa ppaialadlr dhgdrehepp
      601 pkakaprpgp plvegdavif gaaqelqlnk mnppppypgt ipaepaaplp pppgppqppl
      661 dlclkkgefs lypaghyqtp lgyerittfd ssgnveevcr prtrmlcaqs tytlpgpgss
      721 atlritaaek kmqqpcasat lnrltvprys ipagdpppyp diasqlsqgr smaqrldssi
      781 ihatlrrnsr eaalkmaqlm dgqratlqlp pkaksnivsa qyqqrvptal ytcsqcssgg
      841 agssstasag gagniasgna gsstssiggm rpdlsagsgs qhssviahsv stsplvsqss
      901 ysllsppdns rdradyinsa ftedealsqh cpveksvrhv pvslteatls vkrpppyqwd
      961 pmvseeiwvp qertsqssvp nplkppplii gqaqhldmsr vpfvspkspt sptatfqtsy
     1021 gvgvpypgsy sapplqgmqa pcspkealap tqfaqqeptv vlqpgyssnl pycplppmyp
     1081 gsstcsslql ppialhpwss ysacppvqnp qgtlppkpll vvekpvmspp paelqghvgt
     1141 evmvetadtf qevlsltesp vpqrtdkfgk ksrkrldsra eegnvqaite gkvkkeartl
     1201 tdfnsliasp rlgrekkkvk sqkdqlkskk lnktnefqds sesepelfis gdelmnqsqg
     1261 skkgwktkrs lrtaseldef kcrkaseked grlgsqgfvy vmankqplwn eatqvyqldf
     1321 ggrvtqesak nfqielegrq vmqfgridgn ayildfqypf savqafaval anvtqrlk
//
LOCUS       XP_041325598            3268 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit alpha-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325598
VERSION     XP_041325598.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469664.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3268
                     /product="laminin subunit alpha-2 isoform X1"
                     /calculated_mol_wt=359227
     Region          32..278
                     /region_name="LamNT"
                     /note="Laminin N-terminal domain (domain VI); smart00136"
                     /db_xref="CDD:214532"
     Region          280..327
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(280,282,300,302,311)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          407..464
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(407,409,419,435,437,446)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          462..508
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(462,464,479,481,490)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          576..717
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          751..800
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(752,754,761,768,771,780)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          802..857
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(802,804,817,827,830,839)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          859..911
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(860,862,874,881,884,893)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          912..956
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(913,915,925,932,934,943)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          961..>992
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(962,964,974,980,982,991)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1050..1094
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(1050,1052,1062,1068,1070,1079)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1096..1141
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1097,1099,1106,1113,1115,1124)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1143..1191
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1143,1145,1155,1162,1164,1173)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1189..1245
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1189,1191,1201,1216,1218,1227)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1311..1481
                     /region_name="LamB"
                     /note="Laminin B domain; smart00281"
                     /db_xref="CDD:214597"
     Region          1537..1583
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1537,1539,1546,1553,1556,1565)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1585..1642
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1586,1588,1601,1611,1614,1623)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1643..1691
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1644,1646,1656,1663,1665,1674)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1710..1966
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1972..>2262
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          2154..2290
                     /region_name="Laminin_II"
                     /note="Laminin Domain II; pfam06009"
                     /db_xref="CDD:368703"
     Region          2291..2431
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2485..2624
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2645..2821
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          2939..3067
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          3087..3239
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     CDS             1..3268
                     /gene="LAMA2"
                     /coded_by="XM_041469664.1:217..10023"
                     /db_xref="GeneID:121354794"
ORIGIN      
        1 mapeslplll llaalgsrgq spspppppqr glfpavlnla snalittnat cgekgremyc
       61 klvehvpgqp arnpqcricd qrsrvphqrh pianaidgkn twwqspsiqn gieyhyvtit
      121 ldlqqvfqia yvivkaansp rpgnwilers ldgvdyqpwq yyaitdsecl trynihprpg
      181 tpsyikddev ictsyyskih plengeihts lingrpsadd psrellefts arfirlrfqr
      241 irtlnadlmm fahkdpaeid pivtrryyys ikdisvggmc icsghakacp ldpvtnksvc
      301 qcehntcget cdqccpgfhq kpwhagtllh khecepcnch gkteecyydq dvaarnqsln
      361 ihgeylgggv cvncsgytsg incetcldgy frpkgvlpdn pdpcqpcscd pngslndtcv
      421 kdekhtegdl lpgfchcktg yagescnqca lgytgypecl pcncslegse nddpcigpci
      481 ckehvegenc drckpgffnl qqnnpegcee cfcsgktnic rhspftyrsi edmngwyltd
      541 lpglvrvvpt qkrfdghqql sisnvaaqkv lpqiyywsap ssylgnkvaa agghlkftvs
      601 ydvteeeeee taklmvqsdv iieggdlkis tpkgiihlqp seehteeivl kpesfsvhgt
      661 dvpvsrrefm tilanvkril iratysngmn aiyrlrsvim esadhtsrgr rvapavelce
      721 cppgydgtsc escwprhrrv ngtifggvca pctcfghadv cddmtgacld ckhntggsyc
      781 drclpgfygd atkgtaedcq lcacplnips nnfsptchfd rhrglmcdec pagyvgprce
      841 rcaegyfgqp lipggscqpc qcndnldfsv pgscdslsga clickpgttg qycercadgy
      901 fgdalharnc qpchchmngs fseicdsrtg qceckanvig rrcdickpny fwapekvfci
      961 pcgcsalgsv slqcdmlgrc icksgfmgrh ceisrqvpkl qenagssqqi rvpprrwgts
     1021 sasgcprgay rpaalpgtfg lqssrgcvpc ncnsfgsksf dcdgdgqcyc qpgvtgkkcd
     1081 rcahgfynfe eggctpcecs rfgnncdpvs grcicppntv gemcdkcapn hwghnivsgc
     1141 kpcecsliga lssqcdlntg ccfcrpefsg ekctecrlgy wnyphcvacq cflagtdpqs
     1201 cdaegkcscv dhsgqcsckv nvegvhcdrc ksgtfglsar nplgcsscyc fglttqcsea
     1261 rglirlwvtl kpeqmilplv deklqrstls giafqppeiv anieqvmqdl rsepvywrlp
     1321 eqfegrklta yggklkyaiy feareetgft tyspqviirg gpptntriiv rhmaapligq
     1381 ltrheiemte heweyygddq rgrnsgpwey yhgnpglnrt msqgdftwkh ygddsrpsrt
     1441 vsredfmnvl ydvhyilika thgnimrqsr iseislevae dgpvsgmapq ayliekcdcp
     1501 lgysglsces cspgfyrlps ppagrtpaqs lgtctvcqch ghstmcdset svcqdcqhnt
     1561 aghhcercap gfygtvqgsp ddcqpcacpl sipsnnfspt ciaegpsdyr ctacppgyeg
     1621 qycqrcssgy tgnpqipggs cqacecdpyg svpvpcdpvt gqctckpgft gwkcagcehr
     1681 harhgtkcis cddectglll ndldrlnqmi lsvnlsgplp apykmlhgfe nttqelkhll
     1741 spqraperfl qlarenldtl vtemdelltr atkvtadgeq trqdaertnd rakslgqfvk
     1801 gilqaaeaak edavklnetl rtqdktleks lpelqseaeg mviemrnrdl svqekisqde
     1861 lknaedlldk vkrlfgepse knedlkkevr dkladyqskv adaqdllkea askiweadrl
     1921 savnqknmtm lekrkqaved grqdvektlq egndvlnead qlandisiav eyvegvanki
     1981 qpmsdqlkdk iddlsqeird rmlpekvlqa enhagqlnes savldgilte aknlsfnatr
     2041 afnaytnikd ytdeaervak eakalaneam qetsgpqgsl kdgaksslkk sfrvlneakm
     2101 lesdvkekgd dlnstqnrlk dadeknsill rglnetlgkl saipndtaik vqaakdkarq
     2161 andtandvla qikdlnrnll glrknysklt ddvaktnavv kdpvknkifa dadssiknle
     2221 keadrlldki kpikelqdnl gknisqikel inqarkqans ikvsvssggn cirtyrpeik
     2281 kgtyntiivn vktvvadnll fylgsakftd flaiemrkgk vsflwdvgsg vgrveypdlt
     2341 iddgfwyrie asrtgkngti svraldgpka sivpatfsav sppgytildv dvkavlfvgg
     2401 ltekikksda vrvttftgcm getfldskpi glwnfrdieg dckgcsvspq vadsegtvqf
     2461 dgdsyamvsr pirwnpnist vmfkfrtfss nallmylatd dlkdfmsvel sggrikvsyd
     2521 lgsgtasvis nqnhndgkwk sftlsriqkq anisivdidt neeetiatts tgshfglnlk
     2581 ghekiyfggl ptlrnlsmka rpevnlekyt gclkdieisr tpynilsspd fvgltkgctl
     2641 enihtvsfsk pgfvelqpvs fdvgteinls fstrnesgii lfgtggtivp prrkrrhsak
     2701 kaaslkrkrr qtgqayyavf lnrgrlevhv stgirdphri tirpeagefh dgrahsirie
     2761 rargmfsvqv dedkvqtqrf psdqpisvkk lfvggtssqf qtaplrnipp fegciwnlvi
     2821 natpmdfaqp vsfenadigr cptlepevrp tededkptra tvlvqpepdt ngekegprip
     2881 pastpptpyl ssaldscaad tepaileggk qfglsrnshi avafddskvk nrltiefevr
     2941 ttadsgllfy marinhadfa avqiknglpy fsydlgsgnt stmisnkind gqwhqikvsr
     3001 vkqegnlivd gvsngtvspk kadildvvgm lyvgglpiny ttrrigpvlh sidgcirnfk
     3061 mtespvdlnn ptssfnigkc fvtaqkgtyf dgtgfakavg ayrvgtdllv efefrttrmn
     3121 gvllgvssqk mdglgielvg gkvmfhvdng agrfsavyep depgslcdgq whkvlankvk
     3181 hrleltvdgt qvetdspnra stsadtndpl fvggypdgvt qfglttnirf kgcirflklt
     3241 kgtakpqein fskalelkgv qplscpad
//
LOCUS       XP_041325599            3266 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit alpha-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325599
VERSION     XP_041325599.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469665.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3266
                     /product="laminin subunit alpha-2 isoform X2"
                     /calculated_mol_wt=358952
     Region          32..278
                     /region_name="LamNT"
                     /note="Laminin N-terminal domain (domain VI); smart00136"
                     /db_xref="CDD:214532"
     Region          280..327
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(280,282,300,302,311)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          407..464
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(407,409,419,435,437,446)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          462..508
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(462,464,479,481,490)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          576..717
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          751..800
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(752,754,761,768,771,780)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          802..857
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(802,804,817,827,830,839)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          859..911
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(860,862,874,881,884,893)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          912..956
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(913,915,925,932,934,943)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          961..>992
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(962,964,974,980,982,991)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1050..1094
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(1050,1052,1062,1068,1070,1079)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1096..1141
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1097,1099,1106,1113,1115,1124)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1143..1191
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1143,1145,1155,1162,1164,1173)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1189..1245
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1189,1191,1201,1216,1218,1227)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1311..1481
                     /region_name="LamB"
                     /note="Laminin B domain; smart00281"
                     /db_xref="CDD:214597"
     Region          1537..1583
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1537,1539,1546,1553,1556,1565)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1585..1642
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1586,1588,1601,1611,1614,1623)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1643..1691
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1644,1646,1656,1663,1665,1674)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1710..1966
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1972..>2260
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          2154..2288
                     /region_name="Laminin_II"
                     /note="Laminin Domain II; pfam06009"
                     /db_xref="CDD:368703"
     Region          2289..2429
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2483..2622
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2643..2819
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          2937..3065
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          3085..3237
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     CDS             1..3266
                     /gene="LAMA2"
                     /coded_by="XM_041469665.1:217..10017"
                     /db_xref="GeneID:121354794"
ORIGIN      
        1 mapeslplll llaalgsrgq spspppppqr glfpavlnla snalittnat cgekgremyc
       61 klvehvpgqp arnpqcricd qrsrvphqrh pianaidgkn twwqspsiqn gieyhyvtit
      121 ldlqqvfqia yvivkaansp rpgnwilers ldgvdyqpwq yyaitdsecl trynihprpg
      181 tpsyikddev ictsyyskih plengeihts lingrpsadd psrellefts arfirlrfqr
      241 irtlnadlmm fahkdpaeid pivtrryyys ikdisvggmc icsghakacp ldpvtnksvc
      301 qcehntcget cdqccpgfhq kpwhagtllh khecepcnch gkteecyydq dvaarnqsln
      361 ihgeylgggv cvncsgytsg incetcldgy frpkgvlpdn pdpcqpcscd pngslndtcv
      421 kdekhtegdl lpgfchcktg yagescnqca lgytgypecl pcncslegse nddpcigpci
      481 ckehvegenc drckpgffnl qqnnpegcee cfcsgktnic rhspftyrsi edmngwyltd
      541 lpglvrvvpt qkrfdghqql sisnvaaqkv lpqiyywsap ssylgnkvaa agghlkftvs
      601 ydvteeeeee taklmvqsdv iieggdlkis tpkgiihlqp seehteeivl kpesfsvhgt
      661 dvpvsrrefm tilanvkril iratysngmn aiyrlrsvim esadhtsrgr rvapavelce
      721 cppgydgtsc escwprhrrv ngtifggvca pctcfghadv cddmtgacld ckhntggsyc
      781 drclpgfygd atkgtaedcq lcacplnips nnfsptchfd rhrglmcdec pagyvgprce
      841 rcaegyfgqp lipggscqpc qcndnldfsv pgscdslsga clickpgttg qycercadgy
      901 fgdalharnc qpchchmngs fseicdsrtg qceckanvig rrcdickpny fwapekvfci
      961 pcgcsalgsv slqcdmlgrc icksgfmgrh ceisrqvpkl qenagssqqi rvpprrwgts
     1021 sasgcprgay rpaalpgtfg lqssrgcvpc ncnsfgsksf dcdgdgqcyc qpgvtgkkcd
     1081 rcahgfynfe eggctpcecs rfgnncdpvs grcicppntv gemcdkcapn hwghnivsgc
     1141 kpcecsliga lssqcdlntg ccfcrpefsg ekctecrlgy wnyphcvacq cflagtdpqs
     1201 cdaegkcscv dhsgqcsckv nvegvhcdrc ksgtfglsar nplgcsscyc fglttqcsea
     1261 rglirlwvtl kpeqmilplv deklqrstls giafqppeiv anieqvmqdl rsepvywrlp
     1321 eqfegrklta yggklkyaiy feareetgft tyspqviirg gpptntriiv rhmaapligq
     1381 ltrheiemte heweyygddq rgrnsgpwey yhgnpglnrt msqgdftwkh ygddsrpsrt
     1441 vsredfmnvl ydvhyilika thgnimrqsr iseislevae dgpvsgmapq ayliekcdcp
     1501 lgysglsces cspgfyrlps ppagrtpaqs lgtctvcqch ghstmcdset svcqdcqhnt
     1561 aghhcercap gfygtvqgsp ddcqpcacpl sipsnnfspt ciaegpsdyr ctacppgyeg
     1621 qycqrcssgy tgnpqipggs cqacecdpyg svpvpcdpvt gqctckpgft gwkcagcehr
     1681 harhgtkcis cddectglll ndldrlnqmi lsvnlsgplp apykmlhgfe nttqelkhll
     1741 spqraperfl qlarenldtl vtemdelltr atkvtadgeq trqdaertnd rakslgqfvk
     1801 gilqaaeaak edavklnetl rtqdktleks lpelqseaeg mviemrnrdl svqekisqde
     1861 lknaedlldk vkrlfgepse knedlkkevr dkladyqskv adaqdllkea askiweadrl
     1921 savnqknmtm lekrkqaved grqdvektlq egndvlnead qlandisiav eyvegvanki
     1981 qpmsdqlkdk iddlsqeird rmlpekvlqa enhagqlnes savldgilte aknlsfnatr
     2041 afnaytnikd ytdeaervak eakalaneam qetsgpqgsl kdgaksslkk sfrvlneakm
     2101 lesdvkekgd dlnstqnrlk dadeknsill rglnetlgkl saipndtaik vqaakdkarq
     2161 andtandvla qikdlnrnll glrknysklt ddvaktnavv kdpvkniada dssiknleke
     2221 adrlldkikp ikelqdnlgk nisqikelin qarkqansik vsvssggnci rtyrpeikkg
     2281 tyntiivnvk tvvadnllfy lgsakftdfl aiemrkgkvs flwdvgsgvg rveypdltid
     2341 dgfwyrieas rtgkngtisv raldgpkasi vpatfsavsp pgytildvdv kavlfvgglt
     2401 ekikksdavr vttftgcmge tfldskpigl wnfrdiegdc kgcsvspqva dsegtvqfdg
     2461 dsyamvsrpi rwnpnistvm fkfrtfssna llmylatddl kdfmsvelsg grikvsydlg
     2521 sgtasvisnq nhndgkwksf tlsriqkqan isivdidtne eetiattstg shfglnlkgh
     2581 ekiyfgglpt lrnlsmkarp evnlekytgc lkdieisrtp ynilsspdfv gltkgctlen
     2641 ihtvsfskpg fvelqpvsfd vgteinlsfs trnesgiilf gtggtivppr rkrrhsakka
     2701 aslkrkrrqt gqayyavfln rgrlevhvst girdphriti rpeagefhdg rahsiriera
     2761 rgmfsvqvde dkvqtqrfps dqpisvkklf vggtssqfqt aplrnippfe gciwnlvina
     2821 tpmdfaqpvs fenadigrcp tlepevrpte dedkptratv lvqpepdtng ekegprippa
     2881 stpptpylss aldscaadte paileggkqf glsrnshiav afddskvknr ltiefevrtt
     2941 adsgllfyma rinhadfaav qiknglpyfs ydlgsgntst misnkindgq whqikvsrvk
     3001 qegnlivdgv sngtvspkka dildvvgmly vgglpinytt rrigpvlhsi dgcirnfkmt
     3061 espvdlnnpt ssfnigkcfv taqkgtyfdg tgfakavgay rvgtdllvef efrttrmngv
     3121 llgvssqkmd glgielvggk vmfhvdngag rfsavyepde pgslcdgqwh kvlankvkhr
     3181 leltvdgtqv etdspnrast sadtndplfv ggypdgvtqf glttnirfkg cirflkltkg
     3241 takpqeinfs kalelkgvqp lscpad
//
LOCUS       XP_041325600            3264 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit alpha-2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325600
VERSION     XP_041325600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3264
                     /product="laminin subunit alpha-2 isoform X3"
                     /calculated_mol_wt=358810
     Region          32..278
                     /region_name="LamNT"
                     /note="Laminin N-terminal domain (domain VI); smart00136"
                     /db_xref="CDD:214532"
     Region          280..327
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(280,282,300,302,311)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          407..464
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(407,409,419,435,437,446)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          462..508
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(462,464,479,481,490)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          576..717
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          751..800
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(752,754,761,768,771,780)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          802..857
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(802,804,817,827,830,839)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          859..911
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(860,862,874,881,884,893)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          912..956
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(913,915,925,932,934,943)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          961..>992
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(962,964,974,980,982,991)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1050..1094
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(1050,1052,1062,1068,1070,1079)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1096..1141
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1097,1099,1106,1113,1115,1124)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1143..1191
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1143,1145,1155,1162,1164,1173)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1189..1245
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1189,1191,1201,1216,1218,1227)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1311..1481
                     /region_name="LamB"
                     /note="Laminin B domain; smart00281"
                     /db_xref="CDD:214597"
     Region          1537..1583
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1537,1539,1546,1553,1556,1565)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1585..1642
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1586,1588,1601,1611,1614,1623)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1643..1691
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1644,1646,1656,1663,1665,1674)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1710..1966
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1972..>2262
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          2154..2290
                     /region_name="Laminin_II"
                     /note="Laminin Domain II; pfam06009"
                     /db_xref="CDD:368703"
     Region          2291..2431
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2485..2620
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2641..2817
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          2935..3063
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          3083..3235
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     CDS             1..3264
                     /gene="LAMA2"
                     /coded_by="XM_041469666.1:217..10011"
                     /db_xref="GeneID:121354794"
ORIGIN      
        1 mapeslplll llaalgsrgq spspppppqr glfpavlnla snalittnat cgekgremyc
       61 klvehvpgqp arnpqcricd qrsrvphqrh pianaidgkn twwqspsiqn gieyhyvtit
      121 ldlqqvfqia yvivkaansp rpgnwilers ldgvdyqpwq yyaitdsecl trynihprpg
      181 tpsyikddev ictsyyskih plengeihts lingrpsadd psrellefts arfirlrfqr
      241 irtlnadlmm fahkdpaeid pivtrryyys ikdisvggmc icsghakacp ldpvtnksvc
      301 qcehntcget cdqccpgfhq kpwhagtllh khecepcnch gkteecyydq dvaarnqsln
      361 ihgeylgggv cvncsgytsg incetcldgy frpkgvlpdn pdpcqpcscd pngslndtcv
      421 kdekhtegdl lpgfchcktg yagescnqca lgytgypecl pcncslegse nddpcigpci
      481 ckehvegenc drckpgffnl qqnnpegcee cfcsgktnic rhspftyrsi edmngwyltd
      541 lpglvrvvpt qkrfdghqql sisnvaaqkv lpqiyywsap ssylgnkvaa agghlkftvs
      601 ydvteeeeee taklmvqsdv iieggdlkis tpkgiihlqp seehteeivl kpesfsvhgt
      661 dvpvsrrefm tilanvkril iratysngmn aiyrlrsvim esadhtsrgr rvapavelce
      721 cppgydgtsc escwprhrrv ngtifggvca pctcfghadv cddmtgacld ckhntggsyc
      781 drclpgfygd atkgtaedcq lcacplnips nnfsptchfd rhrglmcdec pagyvgprce
      841 rcaegyfgqp lipggscqpc qcndnldfsv pgscdslsga clickpgttg qycercadgy
      901 fgdalharnc qpchchmngs fseicdsrtg qceckanvig rrcdickpny fwapekvfci
      961 pcgcsalgsv slqcdmlgrc icksgfmgrh ceisrqvpkl qenagssqqi rvpprrwgts
     1021 sasgcprgay rpaalpgtfg lqssrgcvpc ncnsfgsksf dcdgdgqcyc qpgvtgkkcd
     1081 rcahgfynfe eggctpcecs rfgnncdpvs grcicppntv gemcdkcapn hwghnivsgc
     1141 kpcecsliga lssqcdlntg ccfcrpefsg ekctecrlgy wnyphcvacq cflagtdpqs
     1201 cdaegkcscv dhsgqcsckv nvegvhcdrc ksgtfglsar nplgcsscyc fglttqcsea
     1261 rglirlwvtl kpeqmilplv deklqrstls giafqppeiv anieqvmqdl rsepvywrlp
     1321 eqfegrklta yggklkyaiy feareetgft tyspqviirg gpptntriiv rhmaapligq
     1381 ltrheiemte heweyygddq rgrnsgpwey yhgnpglnrt msqgdftwkh ygddsrpsrt
     1441 vsredfmnvl ydvhyilika thgnimrqsr iseislevae dgpvsgmapq ayliekcdcp
     1501 lgysglsces cspgfyrlps ppagrtpaqs lgtctvcqch ghstmcdset svcqdcqhnt
     1561 aghhcercap gfygtvqgsp ddcqpcacpl sipsnnfspt ciaegpsdyr ctacppgyeg
     1621 qycqrcssgy tgnpqipggs cqacecdpyg svpvpcdpvt gqctckpgft gwkcagcehr
     1681 harhgtkcis cddectglll ndldrlnqmi lsvnlsgplp apykmlhgfe nttqelkhll
     1741 spqraperfl qlarenldtl vtemdelltr atkvtadgeq trqdaertnd rakslgqfvk
     1801 gilqaaeaak edavklnetl rtqdktleks lpelqseaeg mviemrnrdl svqekisqde
     1861 lknaedlldk vkrlfgepse knedlkkevr dkladyqskv adaqdllkea askiweadrl
     1921 savnqknmtm lekrkqaved grqdvektlq egndvlnead qlandisiav eyvegvanki
     1981 qpmsdqlkdk iddlsqeird rmlpekvlqa enhagqlnes savldgilte aknlsfnatr
     2041 afnaytnikd ytdeaervak eakalaneam qetsgpqgsl kdgaksslkk sfrvlneakm
     2101 lesdvkekgd dlnstqnrlk dadeknsill rglnetlgkl saipndtaik vqaakdkarq
     2161 andtandvla qikdlnrnll glrknysklt ddvaktnavv kdpvknkifa dadssiknle
     2221 keadrlldki kpikelqdnl gknisqikel inqarkqans ikvsvssggn cirtyrpeik
     2281 kgtyntiivn vktvvadnll fylgsakftd flaiemrkgk vsflwdvgsg vgrveypdlt
     2341 iddgfwyrie asrtgkngti svraldgpka sivpatfsav sppgytildv dvkavlfvgg
     2401 ltekikksda vrvttftgcm getfldskpi glwnfrdieg dckgcsvspq vadsegtvqf
     2461 dgdsyamvsr pirwnpnist vmfkfrtfss nallmylatd dlkdfmsvel sggrikvsyd
     2521 lgsgtasvis nqnhndgkwk sftlsriqkq anisivdidt neeetiatts tgshfglnlk
     2581 ghekiyfggl ptlrnlrpev nlekytgclk dieisrtpyn ilsspdfvgl tkgctlenih
     2641 tvsfskpgfv elqpvsfdvg teinlsfstr nesgiilfgt ggtivpprrk rrhsakkaas
     2701 lkrkrrqtgq ayyavflnrg rlevhvstgi rdphritirp eagefhdgra hsirierarg
     2761 mfsvqvdedk vqtqrfpsdq pisvkklfvg gtssqfqtap lrnippfegc iwnlvinatp
     2821 mdfaqpvsfe nadigrcptl epevrptede dkptratvlv qpepdtngek egprippast
     2881 pptpylssal dscaadtepa ileggkqfgl srnshiavaf ddskvknrlt iefevrttad
     2941 sgllfymari nhadfaavqi knglpyfsyd lgsgntstmi snkindgqwh qikvsrvkqe
     3001 gnlivdgvsn gtvspkkadi ldvvgmlyvg glpinyttrr igpvlhsidg cirnfkmtes
     3061 pvdlnnptss fnigkcfvta qkgtyfdgtg fakavgayrv gtdllvefef rttrmngvll
     3121 gvssqkmdgl gielvggkvm fhvdngagrf savyepdepg slcdgqwhkv lankvkhrle
     3181 ltvdgtqvet dspnrastsa dtndplfvgg ypdgvtqfgl ttnirfkgci rflkltkgta
     3241 kpqeinfska lelkgvqpls cpad
//
LOCUS       XP_041325601            3222 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit alpha-2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325601
VERSION     XP_041325601.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469667.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3222
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3222
                     /product="laminin subunit alpha-2 isoform X4"
                     /calculated_mol_wt=354309
     Region          32..278
                     /region_name="LamNT"
                     /note="Laminin N-terminal domain (domain VI); smart00136"
                     /db_xref="CDD:214532"
     Region          280..327
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(280,282,300,302,311)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          407..464
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(407,409,419,435,437,446)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          462..508
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(462,464,479,481,490)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          576..717
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          751..800
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(752,754,761,768,771,780)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          802..857
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(802,804,817,827,830,839)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          859..911
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(860,862,874,881,884,893)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          912..956
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(913,915,925,932,934,943)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          961..>992
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(962,964,974,980,982,991)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1050..1094
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(1050,1052,1062,1068,1070,1079)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1096..1141
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1097,1099,1106,1113,1115,1124)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1143..1191
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1143,1145,1155,1162,1164,1173)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1189..1245
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1189,1191,1201,1216,1218,1227)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1311..1481
                     /region_name="LamB"
                     /note="Laminin B domain; smart00281"
                     /db_xref="CDD:214597"
     Region          <1497..1524
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Region          1537..1583
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1537,1539,1546,1553,1556,1565)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1585..1642
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1586,1588,1601,1611,1614,1623)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1664..1920
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1926..>2216
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          2108..2244
                     /region_name="Laminin_II"
                     /note="Laminin Domain II; pfam06009"
                     /db_xref="CDD:368703"
     Region          2245..2385
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2439..2578
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2599..2775
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          2893..3021
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          3041..3193
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     CDS             1..3222
                     /gene="LAMA2"
                     /coded_by="XM_041469667.1:217..9885"
                     /db_xref="GeneID:121354794"
ORIGIN      
        1 mapeslplll llaalgsrgq spspppppqr glfpavlnla snalittnat cgekgremyc
       61 klvehvpgqp arnpqcricd qrsrvphqrh pianaidgkn twwqspsiqn gieyhyvtit
      121 ldlqqvfqia yvivkaansp rpgnwilers ldgvdyqpwq yyaitdsecl trynihprpg
      181 tpsyikddev ictsyyskih plengeihts lingrpsadd psrellefts arfirlrfqr
      241 irtlnadlmm fahkdpaeid pivtrryyys ikdisvggmc icsghakacp ldpvtnksvc
      301 qcehntcget cdqccpgfhq kpwhagtllh khecepcnch gkteecyydq dvaarnqsln
      361 ihgeylgggv cvncsgytsg incetcldgy frpkgvlpdn pdpcqpcscd pngslndtcv
      421 kdekhtegdl lpgfchcktg yagescnqca lgytgypecl pcncslegse nddpcigpci
      481 ckehvegenc drckpgffnl qqnnpegcee cfcsgktnic rhspftyrsi edmngwyltd
      541 lpglvrvvpt qkrfdghqql sisnvaaqkv lpqiyywsap ssylgnkvaa agghlkftvs
      601 ydvteeeeee taklmvqsdv iieggdlkis tpkgiihlqp seehteeivl kpesfsvhgt
      661 dvpvsrrefm tilanvkril iratysngmn aiyrlrsvim esadhtsrgr rvapavelce
      721 cppgydgtsc escwprhrrv ngtifggvca pctcfghadv cddmtgacld ckhntggsyc
      781 drclpgfygd atkgtaedcq lcacplnips nnfsptchfd rhrglmcdec pagyvgprce
      841 rcaegyfgqp lipggscqpc qcndnldfsv pgscdslsga clickpgttg qycercadgy
      901 fgdalharnc qpchchmngs fseicdsrtg qceckanvig rrcdickpny fwapekvfci
      961 pcgcsalgsv slqcdmlgrc icksgfmgrh ceisrqvpkl qenagssqqi rvpprrwgts
     1021 sasgcprgay rpaalpgtfg lqssrgcvpc ncnsfgsksf dcdgdgqcyc qpgvtgkkcd
     1081 rcahgfynfe eggctpcecs rfgnncdpvs grcicppntv gemcdkcapn hwghnivsgc
     1141 kpcecsliga lssqcdlntg ccfcrpefsg ekctecrlgy wnyphcvacq cflagtdpqs
     1201 cdaegkcscv dhsgqcsckv nvegvhcdrc ksgtfglsar nplgcsscyc fglttqcsea
     1261 rglirlwvtl kpeqmilplv deklqrstls giafqppeiv anieqvmqdl rsepvywrlp
     1321 eqfegrklta yggklkyaiy feareetgft tyspqviirg gpptntriiv rhmaapligq
     1381 ltrheiemte heweyygddq rgrnsgpwey yhgnpglnrt msqgdftwkh ygddsrpsrt
     1441 vsredfmnvl ydvhyilika thgnimrqsr iseislevae dgpvsgmapq ayliekcdcp
     1501 lgysglsces cspgfyrlps ppagrtpaqs lgtctvcqch ghstmcdset svcqdcqhnt
     1561 aghhcercap gfygtvqgsp ddcqpcacpl sipsnnfspt ciaegpsdyr ctacppgyeg
     1621 qycqrcssgy tgnpqipggs cqascddect glllndldrl nqmilsvnls gplpapykml
     1681 hgfenttqel khllspqrap erflqlaren ldtlvtemde lltratkvta dgeqtrqdae
     1741 rtndrakslg qfvkgilqaa eaakedavkl netlrtqdkt lekslpelqs eaegmviemr
     1801 nrdlsvqeki sqdelknaed lldkvkrlfg epseknedlk kevrdklady qskvadaqdl
     1861 lkeaaskiwe adrlsavnqk nmtmlekrkq avedgrqdve ktlqegndvl neadqlandi
     1921 siaveyvegv ankiqpmsdq lkdkiddlsq eirdrmlpek vlqaenhagq lnessavldg
     1981 ilteaknlsf natrafnayt nikdytdeae rvakeakala neamqetsgp qgslkdgaks
     2041 slkksfrvln eakmlesdvk ekgddlnstq nrlkdadekn sillrglnet lgklsaipnd
     2101 taikvqaakd karqandtan dvlaqikdln rnllglrkny skltddvakt navvkdpvkn
     2161 kifadadssi knlekeadrl ldkikpikel qdnlgknisq ikelinqark qansikvsvs
     2221 sggncirtyr peikkgtynt iivnvktvva dnllfylgsa kftdflaiem rkgkvsflwd
     2281 vgsgvgrvey pdltiddgfw yrieasrtgk ngtisvrald gpkasivpat fsavsppgyt
     2341 ildvdvkavl fvggltekik ksdavrvttf tgcmgetfld skpiglwnfr diegdckgcs
     2401 vspqvadseg tvqfdgdsya mvsrpirwnp nistvmfkfr tfssnallmy latddlkdfm
     2461 svelsggrik vsydlgsgta svisnqnhnd gkwksftlsr iqkqanisiv didtneeeti
     2521 attstgshfg lnlkghekiy fgglptlrnl smkarpevnl ekytgclkdi eisrtpynil
     2581 sspdfvgltk gctlenihtv sfskpgfvel qpvsfdvgte inlsfstrne sgiilfgtgg
     2641 tivpprrkrr hsakkaaslk rkrrqtgqay yavflnrgrl evhvstgird phritirpea
     2701 gefhdgrahs irierargmf svqvdedkvq tqrfpsdqpi svkklfvggt ssqfqtaplr
     2761 nippfegciw nlvinatpmd faqpvsfena digrcptlep evrptededk ptratvlvqp
     2821 epdtngekeg prippastpp tpylssalds caadtepail eggkqfglsr nshiavafdd
     2881 skvknrltie fevrttadsg llfymarinh adfaavqikn glpyfsydlg sgntstmisn
     2941 kindgqwhqi kvsrvkqegn livdgvsngt vspkkadild vvgmlyvggl pinyttrrig
     3001 pvlhsidgci rnfkmtespv dlnnptssfn igkcfvtaqk gtyfdgtgfa kavgayrvgt
     3061 dllvefefrt trmngvllgv ssqkmdglgi elvggkvmfh vdngagrfsa vyepdepgsl
     3121 cdgqwhkvla nkvkhrlelt vdgtqvetds pnrastsadt ndplfvggyp dgvtqfgltt
     3181 nirfkgcirf lkltkgtakp qeinfskale lkgvqplscp ad
//
LOCUS       XP_041325602            3183 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit alpha-2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325602
VERSION     XP_041325602.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469668.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3183
                     /product="laminin subunit alpha-2 isoform X5"
                     /calculated_mol_wt=349782
     Region          <42..193
                     /region_name="Laminin_N"
                     /note="Laminin N-terminal (Domain VI); cl02806"
                     /db_xref="CDD:470680"
     Region          195..242
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(195,197,215,217,226)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          322..379
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(322,324,334,350,352,361)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          377..423
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(377,379,394,396,405)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          491..632
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          666..715
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(667,669,676,683,686,695)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          717..772
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(717,719,732,742,745,754)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          774..826
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(775,777,789,796,799,808)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          827..871
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(828,830,840,847,849,858)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          876..>907
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(877,879,889,895,897,906)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          965..1009
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(965,967,977,983,985,994)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1011..1056
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1012,1014,1021,1028,1030,1039)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1058..1106
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1058,1060,1070,1077,1079,1088)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1104..1160
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1104,1106,1116,1131,1133,1142)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1226..1396
                     /region_name="LamB"
                     /note="Laminin B domain; smart00281"
                     /db_xref="CDD:214597"
     Region          <1412..1439
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Region          1452..1498
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1452,1454,1461,1468,1471,1480)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1500..1557
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1501,1503,1516,1526,1529,1538)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1558..1606
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1559,1561,1571,1578,1580,1589)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1625..1881
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1887..>2177
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          2069..2205
                     /region_name="Laminin_II"
                     /note="Laminin Domain II; pfam06009"
                     /db_xref="CDD:368703"
     Region          2206..2346
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2400..2539
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2560..2736
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          2854..2982
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          3002..3154
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     CDS             1..3183
                     /gene="LAMA2"
                     /coded_by="XM_041469668.1:2..9553"
                     /db_xref="GeneID:121354794"
ORIGIN      
        1 mlpvvkrggk ctanslnmyl dslqgtlsaa fvirgaefhi vfqiayvivk aansprpgnw
       61 ilersldgvd yqpwqyyait dsecltryni hprpgtpsyi kddevictsy yskihpleng
      121 eihtslingr psaddpsrel leftsarfir lrfqrirtln adlmmfahkd paeidpivtr
      181 ryyysikdis vggmcicsgh akacpldpvt nksvcqcehn tcgetcdqcc pgfhqkpwha
      241 gtllhkhece pcnchgktee cyydqdvaar nqslnihgey lgggvcvncs gytsgincet
      301 cldgyfrpkg vlpdnpdpcq pcscdpngsl ndtcvkdekh tegdllpgfc hcktgyages
      361 cnqcalgytg ypeclpcncs legsenddpc igpcickehv egencdrckp gffnlqqnnp
      421 egceecfcsg ktnicrhspf tyrsiedmng wyltdlpglv rvvptqkrfd ghqqlsisnv
      481 aaqkvlpqiy ywsapssylg nkvaaagghl kftvsydvte eeeeetaklm vqsdviiegg
      541 dlkistpkgi ihlqpseeht eeivlkpesf svhgtdvpvs rrefmtilan vkriliraty
      601 sngmnaiyrl rsvimesadh tsrgrrvapa velcecppgy dgtscescwp rhrrvngtif
      661 ggvcapctcf ghadvcddmt gacldckhnt ggsycdrclp gfygdatkgt aedcqlcacp
      721 lnipsnnfsp tchfdrhrgl mcdecpagyv gprcercaeg yfgqplipgg scqpcqcndn
      781 ldfsvpgscd slsgaclick pgttgqycer cadgyfgdal harncqpchc hmngsfseic
      841 dsrtgqceck anvigrrcdi ckpnyfwape kvfcipcgcs algsvslqcd mlgrcicksg
      901 fmgrhceisr qvpklqenag ssqqirvppr rwgtssasgc prgayrpaal pgtfglqssr
      961 gcvpcncnsf gsksfdcdgd gqcycqpgvt gkkcdrcahg fynfeeggct pcecsrfgnn
     1021 cdpvsgrcic ppntvgemcd kcapnhwghn ivsgckpcec sligalssqc dlntgccfcr
     1081 pefsgekcte crlgywnyph cvacqcflag tdpqscdaeg kcscvdhsgq csckvnvegv
     1141 hcdrcksgtf glsarnplgc sscycfgltt qcsearglir lwvtlkpeqm ilplvdeklq
     1201 rstlsgiafq ppeivanieq vmqdlrsepv ywrlpeqfeg rkltayggkl kyaiyfeare
     1261 etgfttyspq viirggpptn triivrhmaa pligqltrhe iemtehewey ygddqrgrns
     1321 gpweyyhgnp glnrtmsqgd ftwkhygdds rpsrtvsred fmnvlydvhy ilikathgni
     1381 mrqsriseis levaedgpvs gmapqaylie kcdcplgysg lscescspgf yrlpsppagr
     1441 tpaqslgtct vcqchghstm cdsetsvcqd cqhntaghhc ercapgfygt vqgspddcqp
     1501 cacplsipsn nfsptciaeg psdyrctacp pgyegqycqr cssgytgnpq ipggscqace
     1561 cdpygsvpvp cdpvtgqctc kpgftgwkca gcehrharhg tkciscddec tglllndldr
     1621 lnqmilsvnl sgplpapykm lhgfenttqe lkhllspqra perflqlare nldtlvtemd
     1681 elltratkvt adgeqtrqda ertndraksl gqfvkgilqa aeaakedavk lnetlrtqdk
     1741 tlekslpelq seaegmviem rnrdlsvqek isqdelknae dlldkvkrlf gepseknedl
     1801 kkevrdklad yqskvadaqd llkeaaskiw eadrlsavnq knmtmlekrk qavedgrqdv
     1861 ektlqegndv lneadqland isiaveyveg vankiqpmsd qlkdkiddls qeirdrmlpe
     1921 kvlqaenhag qlnessavld gilteaknls fnatrafnay tnikdytdea ervakeakal
     1981 aneamqetsg pqgslkdgak sslkksfrvl neakmlesdv kekgddlnst qnrlkdadek
     2041 nsillrglne tlgklsaipn dtaikvqaak dkarqandta ndvlaqikdl nrnllglrkn
     2101 yskltddvak tnavvkdpvk nkifadadss iknlekeadr lldkikpike lqdnlgknis
     2161 qikelinqar kqansikvsv ssggncirty rpeikkgtyn tiivnvktvv adnllfylgs
     2221 akftdflaie mrkgkvsflw dvgsgvgrve ypdltiddgf wyrieasrtg kngtisvral
     2281 dgpkasivpa tfsavsppgy tildvdvkav lfvgglteki kksdavrvtt ftgcmgetfl
     2341 dskpiglwnf rdiegdckgc svspqvadse gtvqfdgdsy amvsrpirwn pnistvmfkf
     2401 rtfssnallm ylatddlkdf msvelsggri kvsydlgsgt asvisnqnhn dgkwksftls
     2461 riqkqanisi vdidtneeet iattstgshf glnlkgheki yfgglptlrn lsmkarpevn
     2521 lekytgclkd ieisrtpyni lsspdfvglt kgctleniht vsfskpgfve lqpvsfdvgt
     2581 einlsfstrn esgiilfgtg gtivpprrkr rhsakkaasl krkrrqtgqa yyavflnrgr
     2641 levhvstgir dphritirpe agefhdgrah sirierargm fsvqvdedkv qtqrfpsdqp
     2701 isvkklfvgg tssqfqtapl rnippfegci wnlvinatpm dfaqpvsfen adigrcptle
     2761 pevrpteded kptratvlvq pepdtngeke gprippastp ptpylssald scaadtepai
     2821 leggkqfgls rnshiavafd dskvknrlti efevrttads gllfymarin hadfaavqik
     2881 nglpyfsydl gsgntstmis nkindgqwhq ikvsrvkqeg nlivdgvsng tvspkkadil
     2941 dvvgmlyvgg lpinyttrri gpvlhsidgc irnfkmtesp vdlnnptssf nigkcfvtaq
     3001 kgtyfdgtgf akavgayrvg tdllvefefr ttrmngvllg vssqkmdglg ielvggkvmf
     3061 hvdngagrfs avyepdepgs lcdgqwhkvl ankvkhrlel tvdgtqvetd spnrastsad
     3121 tndplfvggy pdgvtqfglt tnirfkgcir flkltkgtak pqeinfskal elkgvqplsc
     3181 pad
//
LOCUS       XP_041325603            3180 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit alpha-2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325603
VERSION     XP_041325603.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469669.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3180
                     /product="laminin subunit alpha-2 isoform X6"
                     /calculated_mol_wt=349682
     Region          32..278
                     /region_name="LamNT"
                     /note="Laminin N-terminal domain (domain VI); smart00136"
                     /db_xref="CDD:214532"
     Region          280..327
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(280,282,300,302,311)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          407..464
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(407,409,419,435,437,446)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          462..508
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(462,464,479,481,490)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          576..717
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          751..800
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(752,754,761,768,771,780)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          802..857
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(802,804,817,827,830,839)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          859..911
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(860,862,874,881,884,893)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          912..960
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(913,915,925,932,934,943)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          962..1006
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(962,964,974,980,982,991)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1008..1053
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1009,1011,1018,1025,1027,1036)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1055..1103
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1055,1057,1067,1074,1076,1085)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1101..1157
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1101,1103,1113,1128,1130,1139)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1223..1393
                     /region_name="LamB"
                     /note="Laminin B domain; smart00281"
                     /db_xref="CDD:214597"
     Region          <1409..1436
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Region          1449..1495
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1449,1451,1458,1465,1468,1477)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1497..1554
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1498,1500,1513,1523,1526,1535)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1555..1603
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1556,1558,1568,1575,1577,1586)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1622..1878
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1884..>2174
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          2066..2202
                     /region_name="Laminin_II"
                     /note="Laminin Domain II; pfam06009"
                     /db_xref="CDD:368703"
     Region          2203..2343
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2397..2536
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2557..2733
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          2851..2979
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2999..3151
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     CDS             1..3180
                     /gene="LAMA2"
                     /coded_by="XM_041469669.1:217..9759"
                     /db_xref="GeneID:121354794"
ORIGIN      
        1 mapeslplll llaalgsrgq spspppppqr glfpavlnla snalittnat cgekgremyc
       61 klvehvpgqp arnpqcricd qrsrvphqrh pianaidgkn twwqspsiqn gieyhyvtit
      121 ldlqqvfqia yvivkaansp rpgnwilers ldgvdyqpwq yyaitdsecl trynihprpg
      181 tpsyikddev ictsyyskih plengeihts lingrpsadd psrellefts arfirlrfqr
      241 irtlnadlmm fahkdpaeid pivtrryyys ikdisvggmc icsghakacp ldpvtnksvc
      301 qcehntcget cdqccpgfhq kpwhagtllh khecepcnch gkteecyydq dvaarnqsln
      361 ihgeylgggv cvncsgytsg incetcldgy frpkgvlpdn pdpcqpcscd pngslndtcv
      421 kdekhtegdl lpgfchcktg yagescnqca lgytgypecl pcncslegse nddpcigpci
      481 ckehvegenc drckpgffnl qqnnpegcee cfcsgktnic rhspftyrsi edmngwyltd
      541 lpglvrvvpt qkrfdghqql sisnvaaqkv lpqiyywsap ssylgnkvaa agghlkftvs
      601 ydvteeeeee taklmvqsdv iieggdlkis tpkgiihlqp seehteeivl kpesfsvhgt
      661 dvpvsrrefm tilanvkril iratysngmn aiyrlrsvim esadhtsrgr rvapavelce
      721 cppgydgtsc escwprhrrv ngtifggvca pctcfghadv cddmtgacld ckhntggsyc
      781 drclpgfygd atkgtaedcq lcacplnips nnfsptchfd rhrglmcdec pagyvgprce
      841 rcaegyfgqp lipggscqpc qcndnldfsv pgscdslsga clickpgttg qycercadgy
      901 fgdalharnc qpchchmngs fseicdsrtg qceckanvig rrcdickpgt fglqssrgcv
      961 pcncnsfgsk sfdcdgdgqc ycqpgvtgkk cdrcahgfyn feeggctpce csrfgnncdp
     1021 vsgrcicppn tvgemcdkca pnhwghnivs gckpcecsli galssqcdln tgccfcrpef
     1081 sgekctecrl gywnyphcva cqcflagtdp qscdaegkcs cvdhsgqcsc kvnvegvhcd
     1141 rcksgtfgls arnplgcssc ycfglttqcs earglirlwv tlkpeqmilp lvdeklqrst
     1201 lsgiafqppe ivanieqvmq dlrsepvywr lpeqfegrkl tayggklkya iyfeareetg
     1261 fttyspqvii rggpptntri ivrhmaapli gqltrheiem teheweyygd dqrgrnsgpw
     1321 eyyhgnpgln rtmsqgdftw khygddsrps rtvsredfmn vlydvhyili kathgnimrq
     1381 sriseislev aedgpvsgma pqayliekcd cplgysglsc escspgfyrl psppagrtpa
     1441 qslgtctvcq chghstmcds etsvcqdcqh ntaghhcerc apgfygtvqg spddcqpcac
     1501 plsipsnnfs ptciaegpsd yrctacppgy egqycqrcss gytgnpqipg gscqacecdp
     1561 ygsvpvpcdp vtgqctckpg ftgwkcagce hrharhgtkc iscddectgl llndldrlnq
     1621 milsvnlsgp lpapykmlhg fenttqelkh llspqraper flqlarenld tlvtemdell
     1681 tratkvtadg eqtrqdaert ndrakslgqf vkgilqaaea akedavklne tlrtqdktle
     1741 kslpelqsea egmviemrnr dlsvqekisq delknaedll dkvkrlfgep seknedlkke
     1801 vrdkladyqs kvadaqdllk eaaskiwead rlsavnqknm tmlekrkqav edgrqdvekt
     1861 lqegndvlne adqlandisi aveyvegvan kiqpmsdqlk dkiddlsqei rdrmlpekvl
     1921 qaenhagqln essavldgil teaknlsfna trafnaytni kdytdeaerv akeakalane
     1981 amqetsgpqg slkdgakssl kksfrvlnea kmlesdvkek gddlnstqnr lkdadeknsi
     2041 llrglnetlg klsaipndta ikvqaakdka rqandtandv laqikdlnrn llglrknysk
     2101 ltddvaktna vvkdpvknki fadadssikn lekeadrlld kikpikelqd nlgknisqik
     2161 elinqarkqa nsikvsvssg gncirtyrpe ikkgtyntii vnvktvvadn llfylgsakf
     2221 tdflaiemrk gkvsflwdvg sgvgrveypd ltiddgfwyr ieasrtgkng tisvraldgp
     2281 kasivpatfs avsppgytil dvdvkavlfv ggltekikks davrvttftg cmgetfldsk
     2341 piglwnfrdi egdckgcsvs pqvadsegtv qfdgdsyamv srpirwnpni stvmfkfrtf
     2401 ssnallmyla tddlkdfmsv elsggrikvs ydlgsgtasv isnqnhndgk wksftlsriq
     2461 kqanisivdi dtneeetiat tstgshfgln lkghekiyfg glptlrnlsm karpevnlek
     2521 ytgclkdiei srtpynilss pdfvgltkgc tlenihtvsf skpgfvelqp vsfdvgtein
     2581 lsfstrnesg iilfgtggti vpprrkrrhs akkaaslkrk rrqtgqayya vflnrgrlev
     2641 hvstgirdph ritirpeage fhdgrahsir ierargmfsv qvdedkvqtq rfpsdqpisv
     2701 kklfvggtss qfqtaplrni ppfegciwnl vinatpmdfa qpvsfenadi grcptlepev
     2761 rptededkpt ratvlvqpep dtngekegpr ippastpptp ylssaldsca adtepaileg
     2821 gkqfglsrns hiavafddsk vknrltiefe vrttadsgll fymarinhad faavqikngl
     2881 pyfsydlgsg ntstmisnki ndgqwhqikv srvkqegnli vdgvsngtvs pkkadildvv
     2941 gmlyvgglpi nyttrrigpv lhsidgcirn fkmtespvdl nnptssfnig kcfvtaqkgt
     3001 yfdgtgfaka vgayrvgtdl lvefefrttr mngvllgvss qkmdglgiel vggkvmfhvd
     3061 ngagrfsavy epdepgslcd gqwhkvlank vkhrleltvd gtqvetdspn rastsadtnd
     3121 plfvggypdg vtqfglttni rfkgcirflk ltkgtakpqe infskalelk gvqplscpad
//
LOCUS       XP_041325604            3176 aa            linear   VRT 06-MAY-2021
DEFINITION  laminin subunit alpha-2 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325604
VERSION     XP_041325604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3176
                     /product="laminin subunit alpha-2 isoform X7"
                     /calculated_mol_wt=349265
     Region          32..278
                     /region_name="LamNT"
                     /note="Laminin N-terminal domain (domain VI); smart00136"
                     /db_xref="CDD:214532"
     Region          280..327
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(280,282,300,302,311)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          407..464
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(407,409,419,435,437,446)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          462..508
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(462,464,479,481,490)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          576..717
                     /region_name="Laminin_B"
                     /note="Laminin B (Domain IV); pfam00052"
                     /db_xref="CDD:459652"
     Region          751..800
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(752,754,761,768,771,780)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          802..857
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(802,804,817,827,830,839)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          859..911
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(860,862,874,881,884,893)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          912..960
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(913,915,925,932,934,943)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          962..1006
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domai;
                     smart00180"
                     /db_xref="CDD:214543"
     Site            order(962,964,974,980,982,991)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1008..1053
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1009,1011,1018,1025,1027,1036)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1055..1103
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1055,1057,1067,1074,1076,1085)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1101..1157
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1101,1103,1113,1128,1130,1139)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1223..1393
                     /region_name="LamB"
                     /note="Laminin B domain; smart00281"
                     /db_xref="CDD:214597"
     Region          <1409..1436
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cl21504"
                     /db_xref="CDD:473889"
     Region          1449..1495
                     /region_name="Laminin_EGF"
                     /note="Laminin EGF domain; pfam00053"
                     /db_xref="CDD:395007"
     Site            order(1449,1451,1458,1465,1468,1477)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1497..1554
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1498,1500,1513,1523,1526,1535)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1555..1603
                     /region_name="EGF_Lam"
                     /note="Laminin-type epidermal growth factor-like domain;
                     laminins are the major noncollagenous components of
                     basement membranes that mediate cell adhesion, growth
                     migration, and differentiation; the laminin-type epidermal
                     growth factor-like module occurs in...; cd00055"
                     /db_xref="CDD:238012"
     Site            order(1556,1558,1568,1575,1577,1586)
                     /site_type="active"
                     /note="EGF-like motif [active]"
                     /db_xref="CDD:238012"
     Region          1622..1878
                     /region_name="Laminin_I"
                     /note="Laminin Domain I; pfam06008"
                     /db_xref="CDD:310534"
     Region          1884..>2174
                     /region_name="Mplasa_alph_rch"
                     /note="helix-rich Mycoplasma protein; TIGR04523"
                     /db_xref="CDD:275316"
     Region          2066..2202
                     /region_name="Laminin_II"
                     /note="Laminin Domain II; pfam06009"
                     /db_xref="CDD:368703"
     Region          2203..2343
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2397..2532
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2553..2729
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     Region          2847..2975
                     /region_name="Laminin_G_1"
                     /note="Laminin G domain; pfam00054"
                     /db_xref="CDD:395008"
     Region          2995..3147
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cd00110"
                     /db_xref="CDD:238058"
     CDS             1..3176
                     /gene="LAMA2"
                     /coded_by="XM_041469670.1:217..9747"
                     /db_xref="GeneID:121354794"
ORIGIN      
        1 mapeslplll llaalgsrgq spspppppqr glfpavlnla snalittnat cgekgremyc
       61 klvehvpgqp arnpqcricd qrsrvphqrh pianaidgkn twwqspsiqn gieyhyvtit
      121 ldlqqvfqia yvivkaansp rpgnwilers ldgvdyqpwq yyaitdsecl trynihprpg
      181 tpsyikddev ictsyyskih plengeihts lingrpsadd psrellefts arfirlrfqr
      241 irtlnadlmm fahkdpaeid pivtrryyys ikdisvggmc icsghakacp ldpvtnksvc
      301 qcehntcget cdqccpgfhq kpwhagtllh khecepcnch gkteecyydq dvaarnqsln
      361 ihgeylgggv cvncsgytsg incetcldgy frpkgvlpdn pdpcqpcscd pngslndtcv
      421 kdekhtegdl lpgfchcktg yagescnqca lgytgypecl pcncslegse nddpcigpci
      481 ckehvegenc drckpgffnl qqnnpegcee cfcsgktnic rhspftyrsi edmngwyltd
      541 lpglvrvvpt qkrfdghqql sisnvaaqkv lpqiyywsap ssylgnkvaa agghlkftvs
      601 ydvteeeeee taklmvqsdv iieggdlkis tpkgiihlqp seehteeivl kpesfsvhgt
      661 dvpvsrrefm tilanvkril iratysngmn aiyrlrsvim esadhtsrgr rvapavelce
      721 cppgydgtsc escwprhrrv ngtifggvca pctcfghadv cddmtgacld ckhntggsyc
      781 drclpgfygd atkgtaedcq lcacplnips nnfsptchfd rhrglmcdec pagyvgprce
      841 rcaegyfgqp lipggscqpc qcndnldfsv pgscdslsga clickpgttg qycercadgy
      901 fgdalharnc qpchchmngs fseicdsrtg qceckanvig rrcdickpgt fglqssrgcv
      961 pcncnsfgsk sfdcdgdgqc ycqpgvtgkk cdrcahgfyn feeggctpce csrfgnncdp
     1021 vsgrcicppn tvgemcdkca pnhwghnivs gckpcecsli galssqcdln tgccfcrpef
     1081 sgekctecrl gywnyphcva cqcflagtdp qscdaegkcs cvdhsgqcsc kvnvegvhcd
     1141 rcksgtfgls arnplgcssc ycfglttqcs earglirlwv tlkpeqmilp lvdeklqrst
     1201 lsgiafqppe ivanieqvmq dlrsepvywr lpeqfegrkl tayggklkya iyfeareetg
     1261 fttyspqvii rggpptntri ivrhmaapli gqltrheiem teheweyygd dqrgrnsgpw
     1321 eyyhgnpgln rtmsqgdftw khygddsrps rtvsredfmn vlydvhyili kathgnimrq
     1381 sriseislev aedgpvsgma pqayliekcd cplgysglsc escspgfyrl psppagrtpa
     1441 qslgtctvcq chghstmcds etsvcqdcqh ntaghhcerc apgfygtvqg spddcqpcac
     1501 plsipsnnfs ptciaegpsd yrctacppgy egqycqrcss gytgnpqipg gscqacecdp
     1561 ygsvpvpcdp vtgqctckpg ftgwkcagce hrharhgtkc iscddectgl llndldrlnq
     1621 milsvnlsgp lpapykmlhg fenttqelkh llspqraper flqlarenld tlvtemdell
     1681 tratkvtadg eqtrqdaert ndrakslgqf vkgilqaaea akedavklne tlrtqdktle
     1741 kslpelqsea egmviemrnr dlsvqekisq delknaedll dkvkrlfgep seknedlkke
     1801 vrdkladyqs kvadaqdllk eaaskiwead rlsavnqknm tmlekrkqav edgrqdvekt
     1861 lqegndvlne adqlandisi aveyvegvan kiqpmsdqlk dkiddlsqei rdrmlpekvl
     1921 qaenhagqln essavldgil teaknlsfna trafnaytni kdytdeaerv akeakalane
     1981 amqetsgpqg slkdgakssl kksfrvlnea kmlesdvkek gddlnstqnr lkdadeknsi
     2041 llrglnetlg klsaipndta ikvqaakdka rqandtandv laqikdlnrn llglrknysk
     2101 ltddvaktna vvkdpvknki fadadssikn lekeadrlld kikpikelqd nlgknisqik
     2161 elinqarkqa nsikvsvssg gncirtyrpe ikkgtyntii vnvktvvadn llfylgsakf
     2221 tdflaiemrk gkvsflwdvg sgvgrveypd ltiddgfwyr ieasrtgkng tisvraldgp
     2281 kasivpatfs avsppgytil dvdvkavlfv ggltekikks davrvttftg cmgetfldsk
     2341 piglwnfrdi egdckgcsvs pqvadsegtv qfdgdsyamv srpirwnpni stvmfkfrtf
     2401 ssnallmyla tddlkdfmsv elsggrikvs ydlgsgtasv isnqnhndgk wksftlsriq
     2461 kqanisivdi dtneeetiat tstgshfgln lkghekiyfg glptlrnlrp evnlekytgc
     2521 lkdieisrtp ynilsspdfv gltkgctlen ihtvsfskpg fvelqpvsfd vgteinlsfs
     2581 trnesgiilf gtggtivppr rkrrhsakka aslkrkrrqt gqayyavfln rgrlevhvst
     2641 girdphriti rpeagefhdg rahsiriera rgmfsvqvde dkvqtqrfps dqpisvkklf
     2701 vggtssqfqt aplrnippfe gciwnlvina tpmdfaqpvs fenadigrcp tlepevrpte
     2761 dedkptratv lvqpepdtng ekegprippa stpptpylss aldscaadte paileggkqf
     2821 glsrnshiav afddskvknr ltiefevrtt adsgllfyma rinhadfaav qiknglpyfs
     2881 ydlgsgntst misnkindgq whqikvsrvk qegnlivdgv sngtvspkka dildvvgmly
     2941 vgglpinytt rrigpvlhsi dgcirnfkmt espvdlnnpt ssfnigkcfv taqkgtyfdg
     3001 tgfakavgay rvgtdllvef efrttrmngv llgvssqkmd glgielvggk vmfhvdngag
     3061 rfsavyepde pgslcdgqwh kvlankvkhr leltvdgtqv etdspnrast sadtndplfv
     3121 ggypdgvtqf glttnirfkg cirflkltkg takpqeinfs kalelkgvqp lscpad
//
LOCUS       XP_041325605             804 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325605
VERSION     XP_041325605.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469671.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..804
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..804
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X1"
                     /calculated_mol_wt=87762
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..804
                     /gene="REPS1"
                     /coded_by="XM_041469671.1:134..2548"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst vipivsevge qtgevgysgs paeappsksp smpslnqtwp
      421 elnqsseqwe tfserssssq tltqfdsnia padpdtaivh pvpirmtpsk ihmqemelkr
      481 tgsdhanpts pllvkpsdlp eenkisssvk ftsgntvtdg ysssdsytsd peqignavtr
      541 qrshsgtspd ntappppppr phashsrsss ldmnrsfsvt pgqqqagvva yppavpprpq
      601 psqgtgphvh rsvdadglia htstspqqip eqpnfadfsq feafavsgvn keeedeieth
      661 sevlqvekps esasslrvak adgrvedkap anvpssagkg ttplapppkp irrrlksede
      721 lrpeaeehtq ktgviaavla sqpsiprsvg kdkkaiqasi rrnketntvl arlnselqqq
      781 lkdvleeris levqleqlrp fshl
//
LOCUS       XP_041325606             803 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325606
VERSION     XP_041325606.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469672.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..803
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X2"
                     /calculated_mol_wt=87660
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..803
                     /gene="REPS1"
                     /coded_by="XM_041469672.1:134..2545"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst vipivsevge qtgevgysgs paeappsksp smpslnqtwp
      421 elnqsseqwe tfserssssq tltqfdsnia padpdtaivh pvpirmtpsk ihmqemelkr
      481 tgsdhanpts pllvkpsdlp eenkisssvk ftsgntvngy sssdsytsdp eqignavtrq
      541 rshsgtspdn tapppppprp hashsrsssl dmnrsfsvtp gqqqagvvay ppavpprpqp
      601 sqgtgphvhr svdadgliah tstspqqipe qpnfadfsqf eafavsgvnk eeedeieths
      661 evlqvekpse sasslrvaka dgrvedkapa nvpssagkgt tplapppkpi rrrlksedel
      721 rpeaeehtqk tgviaavlas qpsiprsvgk dkkaiqasir rnketntvla rlnselqqql
      781 kdvleerisl evqleqlrpf shl
//
LOCUS       XP_041325607             803 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325607
VERSION     XP_041325607.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469673.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..803
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X3"
                     /calculated_mol_wt=87634
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..803
                     /gene="REPS1"
                     /coded_by="XM_041469673.1:134..2545"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst vipivsevge qtgevgysgs paeappsksp smpslnqtwp
      421 elnqssewet fserssssqt ltqfdsniap adpdtaivhp vpirmtpski hmqemelkrt
      481 gsdhanptsp llvkpsdlpe enkisssvkf tsgntvtdgy sssdsytsdp eqignavtrq
      541 rshsgtspdn tapppppprp hashsrsssl dmnrsfsvtp gqqqagvvay ppavpprpqp
      601 sqgtgphvhr svdadgliah tstspqqipe qpnfadfsqf eafavsgvnk eeedeieths
      661 evlqvekpse sasslrvaka dgrvedkapa nvpssagkgt tplapppkpi rrrlksedel
      721 rpeaeehtqk tgviaavlas qpsiprsvgk dkkaiqasir rnketntvla rlnselqqql
      781 kdvleerisl evqleqlrpf shl
//
LOCUS       XP_041325608             798 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325608
VERSION     XP_041325608.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469674.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..798
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X4"
                     /calculated_mol_wt=87153
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..798
                     /gene="REPS1"
                     /coded_by="XM_041469674.1:134..2530"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst evgeqtgevg ysgspaeapp skspsmpsln qtwpelnqss
      421 eqwetfsers sssqtltqfd sniapadpdt aivhpvpirm tpskihmqem elkrtgsdha
      481 nptspllvkp sdlpeenkis ssvkftsgnt vtdgysssds ytsdpeqign avtrqrshsg
      541 tspdntappp ppprphashs rsssldmnrs fsvtpgqqqa gvvayppavp prpqpsqgtg
      601 phvhrsvdad gliahtstsp qqipeqpnfa dfsqfeafav sgvnkeeede iethsevlqv
      661 ekpsesassl rvakadgrve dkapanvpss agkgttplap ppkpirrrlk sedelrpeae
      721 ehtqktgvia avlasqpsip rsvgkdkkai qasirrnket ntvlarlnse lqqqlkdvle
      781 erislevqle qlrpfshl
//
LOCUS       XP_041325609             797 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325609
VERSION     XP_041325609.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469675.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X5"
                     /calculated_mol_wt=87051
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..797
                     /gene="REPS1"
                     /coded_by="XM_041469675.1:134..2527"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst evgeqtgevg ysgspaeapp skspsmpsln qtwpelnqss
      421 eqwetfsers sssqtltqfd sniapadpdt aivhpvpirm tpskihmqem elkrtgsdha
      481 nptspllvkp sdlpeenkis ssvkftsgnt vngysssdsy tsdpeqigna vtrqrshsgt
      541 spdntapppp pprphashsr sssldmnrsf svtpgqqqag vvayppavpp rpqpsqgtgp
      601 hvhrsvdadg liahtstspq qipeqpnfad fsqfeafavs gvnkeeedei ethsevlqve
      661 kpsesasslr vakadgrved kapanvpssa gkgttplapp pkpirrrlks edelrpeaee
      721 htqktgviaa vlasqpsipr svgkdkkaiq asirrnketn tvlarlnsel qqqlkdvlee
      781 rislevqleq lrpfshl
//
LOCUS       XP_041325610             797 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325610
VERSION     XP_041325610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469676.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X6"
                     /calculated_mol_wt=87024
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..797
                     /gene="REPS1"
                     /coded_by="XM_041469676.1:134..2527"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst vgeqtgevgy sgspaeapps kspsmpslnq twpelnqsse
      421 qwetfserss ssqtltqfds niapadpdta ivhpvpirmt pskihmqeme lkrtgsdhan
      481 ptspllvkps dlpeenkiss svkftsgntv tdgysssdsy tsdpeqigna vtrqrshsgt
      541 spdntapppp pprphashsr sssldmnrsf svtpgqqqag vvayppavpp rpqpsqgtgp
      601 hvhrsvdadg liahtstspq qipeqpnfad fsqfeafavs gvnkeeedei ethsevlqve
      661 kpsesasslr vakadgrved kapanvpssa gkgttplapp pkpirrrlks edelrpeaee
      721 htqktgviaa vlasqpsipr svgkdkkaiq asirrnketn tvlarlnsel qqqlkdvlee
      781 rislevqleq lrpfshl
//
LOCUS       XP_041325611             797 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325611
VERSION     XP_041325611.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469677.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X7"
                     /calculated_mol_wt=87025
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..797
                     /gene="REPS1"
                     /coded_by="XM_041469677.1:134..2527"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst evgeqtgevg ysgspaeapp skspsmpsln qtwpelnqss
      421 ewetfserss ssqtltqfds niapadpdta ivhpvpirmt pskihmqeme lkrtgsdhan
      481 ptspllvkps dlpeenkiss svkftsgntv tdgysssdsy tsdpeqigna vtrqrshsgt
      541 spdntapppp pprphashsr sssldmnrsf svtpgqqqag vvayppavpp rpqpsqgtgp
      601 hvhrsvdadg liahtstspq qipeqpnfad fsqfeafavs gvnkeeedei ethsevlqve
      661 kpsesasslr vakadgrved kapanvpssa gkgttplapp pkpirrrlks edelrpeaee
      721 htqktgviaa vlasqpsipr svgkdkkaiq asirrnketn tvlarlnsel qqqlkdvlee
      781 rislevqleq lrpfshl
//
LOCUS       XP_041325613             783 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325613
VERSION     XP_041325613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..783
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..783
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X8"
                     /calculated_mol_wt=85639
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          259..350
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..783
                     /gene="REPS1"
                     /coded_by="XM_041469679.1:134..2485"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwdqttvrtv
      241 asattaneir rqsssyddpw kitdeqrqyy vnqfktiqpd lngfipgsaa kefftksklp
      301 ilelshiwel sdfdkdgalt ldefcaafhl vvarkngydl peklpeslmp klidledstv
      361 ipivsevgeq tgevgysgsp aeappsksps mpslnqtwpe lnqsseqwet fserssssqt
      421 ltqfdsniap adpdtaivhp vpirmtpski hmqemelkrt gsdhanptsp llvkpsdlpe
      481 enkisssvkf tsgntvtdgy sssdsytsdp eqignavtrq rshsgtspdn tapppppprp
      541 hashsrsssl dmnrsfsvtp gqqqagvvay ppavpprpqp sqgtgphvhr svdadgliah
      601 tstspqqipe qpnfadfsqf eafavsgvnk eeedeieths evlqvekpse sasslrvaka
      661 dgrvedkapa nvpssagkgt tplapppkpi rrrlksedel rpeaeehtqk tgviaavlas
      721 qpsiprsvgk dkkaiqasir rnketntvla rlnselqqql kdvleerisl evqleqlrpf
      781 shl
//
LOCUS       XP_041325614             777 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325614
VERSION     XP_041325614.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469680.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..777
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X9"
                     /calculated_mol_wt=84750
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..777
                     /gene="REPS1"
                     /coded_by="XM_041469680.1:134..2467"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst vipivsevge qtgevgysgs paeappsksp smpslnqtwp
      421 elnqssedta ivhpvpirmt pskihmqeme lkrtgsdhan ptspllvkps dlpeenkiss
      481 svkftsgntv tdgysssdsy tsdpeqigna vtrqrshsgt spdntapppp pprphashsr
      541 sssldmnrsf svtpgqqqag vvayppavpp rpqpsqgtgp hvhrsvdadg liahtstspq
      601 qipeqpnfad fsqfeafavs gvnkeeedei ethsevlqve kpsesasslr vakadgrved
      661 kapanvpssa gkgttplapp pkpirrrlks edelrpeaee htqktgviaa vlasqpsipr
      721 svgkdkkaiq asirrnketn tvlarlnsel qqqlkdvlee rislevqleq lrpfshl
//
LOCUS       XP_041325615             771 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325615
VERSION     XP_041325615.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469681.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..771
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X10"
                     /calculated_mol_wt=84141
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..771
                     /gene="REPS1"
                     /coded_by="XM_041469681.1:134..2449"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst evgeqtgevg ysgspaeapp skspsmpsln qtwpelnqss
      421 edtaivhpvp irmtpskihm qemelkrtgs dhanptspll vkpsdlpeen kisssvkfts
      481 gntvtdgyss sdsytsdpeq ignavtrqrs hsgtspdnta pppppprpha shsrsssldm
      541 nrsfsvtpgq qqagvvaypp avpprpqpsq gtgphvhrsv dadgliahts tspqqipeqp
      601 nfadfsqfea favsgvnkee edeiethsev lqvekpsesa sslrvakadg rvedkapanv
      661 pssagkgttp lapppkpirr rlksedelrp eaeehtqktg viaavlasqp siprsvgkdk
      721 kaiqasirrn ketntvlarl nselqqqlkd vleerislev qleqlrpfsh l
//
LOCUS       XP_041325616             770 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325616
VERSION     XP_041325616.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469682.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X11"
                     /calculated_mol_wt=84012
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..770
                     /gene="REPS1"
                     /coded_by="XM_041469682.1:134..2446"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst vgeqtgevgy sgspaeapps kspsmpslnq twpelnqsse
      421 dtaivhpvpi rmtpskihmq emelkrtgsd hanptspllv kpsdlpeenk isssvkftsg
      481 ntvtdgysss dsytsdpeqi gnavtrqrsh sgtspdntap ppppprphas hsrsssldmn
      541 rsfsvtpgqq qagvvayppa vpprpqpsqg tgphvhrsvd adgliahtst spqqipeqpn
      601 fadfsqfeaf avsgvnkeee deiethsevl qvekpsesas slrvakadgr vedkapanvp
      661 ssagkgttpl apppkpirrr lksedelrpe aeehtqktgv iaavlasqps iprsvgkdkk
      721 aiqasirrnk etntvlarln selqqqlkdv leerislevq leqlrpfshl
//
LOCUS       XP_041325617             758 aa            linear   VRT 06-MAY-2021
DEFINITION  ralBP1-associated Eps domain-containing protein 1 isoform X12
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325617
VERSION     XP_041325617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469683.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="ralBP1-associated Eps domain-containing protein
                     1 isoform X12"
                     /calculated_mol_wt=83060
     Region          6..85
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     Region          280..371
                     /region_name="EH"
                     /note="Eps15 homology domain; smart00027"
                     /db_xref="CDD:197477"
     CDS             1..758
                     /gene="REPS1"
                     /coded_by="XM_041469683.1:134..2410"
                     /db_xref="GeneID:121354795"
ORIGIN      
        1 megmtlseae qryycdlfsy cdtestkkva sngrvlelfr aaqlpndvvm qimelcgatr
       61 lgyfgrsqfy ialklvavaq sglplrvesl ntvkdlplpr fvvskneqes rhtalyssda
      121 dnpasysgvi pppppgriqv kkgsvshdav qqrtstdqqe stspvvspqq spptsphtwr
      181 khnrhpsggn nerplagpgp fwapfsevqp gsstssdpiw sghsppphqe nwvsfadtpp
      241 tsallamhpa svqdqttvrt vasattanei rrqsssyddp wkitdeqrqy yvnqfktiqp
      301 dlngfipgsa akefftkskl pilelshiwe lsdfdkdgal tldefcaafh lvvarkngyd
      361 lpeklpeslm pklidledst vipivsevge qtgevgysgs paeappsksp smpslnqtwp
      421 elnqsseqwe tfserssssq tltqfdsnia padpdtaivh pvpirmtpsk ihmqemelkr
      481 tgsdhanpts pllvkpsdlp eenkisssvk ftsgntvtdg ysssdsytsd peqignavtr
      541 qrshsgtspd ntappppppr phashsrsss ldmnrsfsvt pgqqqagvva yppavpprpq
      601 psqgtgphvh rsvdadglia htstspqqip eqpnfadfsq feafavsgvn keeedeieth
      661 sevlqvekps esasslrvak adgrvedkap anvpssagkg ttplapppkp irrrlksede
      721 lrpeaeehtq ktdqwektrr qfrhqsdvtr kptlfwpd
//
LOCUS       XP_041325618             190 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 28A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325618
VERSION     XP_041325618.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469684.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="coiled-coil domain-containing protein 28A
                     isoform X1"
                     /calculated_mol_wt=20728
     Region          83..159
                     /region_name="CCDC28"
                     /note="Coiled-coil domain-containing protein 28;
                     pfam13270"
                     /db_xref="CDD:463822"
     CDS             1..190
                     /gene="CCDC28A"
                     /coded_by="XM_041469684.1:325..897"
                     /db_xref="GeneID:121354796"
ORIGIN      
        1 meerkikrrs pksssshsaq vanskkssvp vskstafsnp apqpavqkpk lkrvikekak
       61 ppggeakgaq aapiqhsflt dvsdvqemer gllsllndfh sgklqafgne csieqmehvr
      121 smqeklarln lelygemeel pedkrklasd snldrllsdv stgkaeitel spqqslvqen
      181 papvravics
//
LOCUS       XP_041325619             190 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 28A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325619
VERSION     XP_041325619.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469685.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="coiled-coil domain-containing protein 28A
                     isoform X1"
                     /calculated_mol_wt=20728
     Region          83..159
                     /region_name="CCDC28"
                     /note="Coiled-coil domain-containing protein 28;
                     pfam13270"
                     /db_xref="CDD:463822"
     CDS             1..190
                     /gene="CCDC28A"
                     /coded_by="XM_041469685.1:123..695"
                     /db_xref="GeneID:121354796"
ORIGIN      
        1 meerkikrrs pksssshsaq vanskkssvp vskstafsnp apqpavqkpk lkrvikekak
       61 ppggeakgaq aapiqhsflt dvsdvqemer gllsllndfh sgklqafgne csieqmehvr
      121 smqeklarln lelygemeel pedkrklasd snldrllsdv stgkaeitel spqqslvqen
      181 papvravics
//
LOCUS       XP_041325620             190 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 28A isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325620
VERSION     XP_041325620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..190
                     /product="coiled-coil domain-containing protein 28A
                     isoform X1"
                     /calculated_mol_wt=20728
     Region          83..159
                     /region_name="CCDC28"
                     /note="Coiled-coil domain-containing protein 28;
                     pfam13270"
                     /db_xref="CDD:463822"
     CDS             1..190
                     /gene="CCDC28A"
                     /coded_by="XM_041469686.1:408..980"
                     /db_xref="GeneID:121354796"
ORIGIN      
        1 meerkikrrs pksssshsaq vanskkssvp vskstafsnp apqpavqkpk lkrvikekak
       61 ppggeakgaq aapiqhsflt dvsdvqemer gllsllndfh sgklqafgne csieqmehvr
      121 smqeklarln lelygemeel pedkrklasd snldrllsdv stgkaeitel spqqslvqen
      181 papvravics
//
LOCUS       XP_041325621             184 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 28A isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325621
VERSION     XP_041325621.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469687.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="coiled-coil domain-containing protein 28A
                     isoform X2"
                     /calculated_mol_wt=20140
     Region          83..168
                     /region_name="CCDC28"
                     /note="Coiled-coil domain-containing protein 28;
                     pfam13270"
                     /db_xref="CDD:463822"
     CDS             1..184
                     /gene="CCDC28A"
                     /coded_by="XM_041469687.1:123..677"
                     /db_xref="GeneID:121354796"
ORIGIN      
        1 meerkikrrs pksssshsaq vanskkssvp vskstafsnp apqpavqkpk lkrvikekak
       61 ppggeakgaq aapiqhsflt dvsdvqemer gllsllndfh sgklqafgne csieqmehvr
      121 smqeklarln lelygemeel pedkrklasd snldrllsdl eelnssiqkl hladaqdipn
      181 gttg
//
LOCUS       XP_041325623            1978 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 12 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325623
VERSION     XP_041325623.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469689.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1978
                     /product="A-kinase anchor protein 12 isoform X1"
                     /calculated_mol_wt=213557
     Region          <2..>105
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          <318..874
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          875..903
                     /region_name="WSK"
                     /note="WSK motif; pfam03832"
                     /db_xref="CDD:461069"
     Region          <1045..1210
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     CDS             1..1978
                     /gene="AKAP12"
                     /coded_by="XM_041469689.1:34..5970"
                     /db_xref="GeneID:121354797"
ORIGIN      
        1 mgagssaepa apqdgaaaep pstppeplpa edaaesqppa epakalnasl pvpdvsednl
       61 kddaspqepv qlgavtaske qggqqsevas plqeppseqt esaganvgqt ehssvtvked
      121 tetmetnpsd sgtkdgvdae kedahsikql paleevaedq vaepqsydlg fkkvfkfvgf
      181 rftvkkektg ksepvqlltv kketqvpegg ddqkevasee tavpedvssa edntkdtlkn
      241 ektedespki peateicsqp aalatetasp lrklftqgwt gfrkkksfrk pkedeqqspv
      301 keeekekeet tltteiseke eqpesekqde ernvtavtve ahekeqtege gqesentlaa
      361 tgvegsekke avkhdeqgqk edlaaaavke saegkkddqe rklvdvpenl dkeeekteeg
      421 ekegevtekp lktksvvplv tdsvngeltt sseglpvgek lesmekhegd drteiaseet
      481 cetgsvamei ssdqlrkseg regskhallg ketldektee gelkmsptad dvaqgealdr
      541 ttekkeskeh etkstlsape sksfsiseqs vdtednqqsv kpadeglqvk pgtdttdtvk
      601 pdettmevts eeaagkrppe gitneaells sqektklqgs plkklftgtg lkklsgkkqk
      661 gkreesksge qgepiqhlsd spdspeeqkg essasspeem neipslekse dgmqvtesed
      721 atipdverkr envtpwasfk kmvtpkkrvr rpsesdkeee idktknvavs aaenavdenq
      781 geiqengidq kpekiteepk rkvdtsvswe tficvgsskk rarkssssde esqkveesgq
      841 sketatdavl tssqesdqgq gnsspeqags psesegistw esfkrlvtpr rrsktrmeer
      901 sedsvvgssl ehstsdgepg kdeswvpfrk lmpgrrkkks dgkpepahlk qaredmaeaa
      961 eedsdvpavv plseyeaaeq ekmeaqrakd aeamrkqtse eeraekleet ltmgqgsegl
     1021 vhavgvtive eeravssiee rspswisaal tecieqvree eeketektae pgvtvedavv
     1081 aaetvpetrk dasddttase leltseavta letaepscae etmevslaee ttemvsavsq
     1141 letpdtteea tpvqeveate enlkeldkqt qkvlhevaer vkadvtqtvs eqavtetiit
     1201 tvqglesevk ggakdgnvag qetvlleqsl ekehkedgpq qsagsiqgqn rveesvlpeg
     1261 sekseipsam eestdgcqgc vedhkevnev qrtteetlsh dkefhsikai tpkeelfanq
     1321 epseqeklpv teltmdetrd ecapegkpav qdktedetss lgltaekleg egrtltvgse
     1381 cteavvtvva vktekqdgip dseeqvctkg vpsrtpalre eddavhngvk stevtvpevl
     1441 leskgktsal psktvgseaa ayaeqsmgng sdrdiaakds vpiiepqcgd nttetpsksg
     1501 esrdgevega viksetqles tsivaeapvq ikadgasnla sicpeiveng savitdkspk
     1561 kcetpsslag eetvgkgqel vetlncqgfq kedkkneell dgakevfeyg kqeavrhdec
     1621 stavqqeegs gsafpqalkt pvalaaaagg ehvvaetatr tdvtaetvep lattpeqmas
     1681 eevpvsstdc sgcgtaelgs veapkprvtc asmngvseeq eqaqsagqae hngipsshsl
     1741 spshpefqdc vvhsvviesq stkivlnaiq savhklaete esaalesees iksvgkspsd
     1801 vivpellgst qvdqqlpvkk egirskeqel kqpeivktat ltesaeihap vektkdtpli
     1861 semlrdgqsq nsltvvtspe eiprgsvrlq kstleqstse dstkdtvdih tpklrekevg
     1921 yimeisdqht gqqtcresee qpyhppvedg ktqmweddsc qegtscdrqs qnsvaltp
//
LOCUS       XP_041325624            1880 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 12 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325624
VERSION     XP_041325624.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469690.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1880
                     /product="A-kinase anchor protein 12 isoform X2"
                     /calculated_mol_wt=203889
     Region          <220..776
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          777..805
                     /region_name="WSK"
                     /note="WSK motif; pfam03832"
                     /db_xref="CDD:461069"
     Region          <947..1112
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     CDS             1..1880
                     /gene="AKAP12"
                     /coded_by="XM_041469690.1:262..5904"
                     /db_xref="GeneID:121354797"
ORIGIN      
        1 mlgtvtmavg qtehssvtvk edtetmetnp sdsgtkdgvd aekedahsik qlpaleevae
       61 dqvaepqsyd lgfkkvfkfv gfrftvkkek tgksepvqll tvkketqvpe ggddqkevas
      121 eetavpedvs saedntkdtl knektedesp kipeateics qpaalateta splrklftqg
      181 wtgfrkkksf rkpkedeqqs pvkeeekeke ettltteise keeqpesekq deernvtavt
      241 veahekeqte gegqesentl aatgvegsek keavkhdeqg qkedlaaaav kesaegkkdd
      301 qerklvdvpe nldkeeekte egekegevte kplktksvvp lvtdsvngel ttsseglpvg
      361 eklesmekhe gddrteiase etcetgsvam eissdqlrks egregskhal lgketldekt
      421 eegelkmspt addvaqgeal drttekkesk ehetkstlsa pesksfsise qsvdtednqq
      481 svkpadeglq vkpgtdttdt vkpdettmev tseeaagkrp pegitneael lssqektklq
      541 gsplkklftg tglkklsgkk qkgkreesks geqgepiqhl sdspdspeeq kgessasspe
      601 emneipslek sedgmqvtes edatipdver krenvtpwas fkkmvtpkkr vrrpsesdke
      661 eeidktknva vsaaenavde nqgeiqengi dqkpekitee pkrkvdtsvs wetficvgss
      721 kkrarkssss deesqkvees gqsketatda vltssqesdq gqgnsspeqa gspsesegis
      781 twesfkrlvt prrrsktrme ersedsvvgs slehstsdge pgkdeswvpf rklmpgrrkk
      841 ksdgkpepah lkqaredmae aaeedsdvpa vvplseyeaa eqekmeaqra kdaeamrkqt
      901 seeeraekle etltmgqgse glvhavgvti veeeravssi eerspswisa altecieqvr
      961 eeeeketekt aepgvtveda vvaaetvpet rkdasddtta seleltseav taletaepsc
     1021 aeetmevsla eettemvsav sqletpdtte eatpvqevea teenlkeldk qtqkvlheva
     1081 ervkadvtqt vseqavteti ittvqglese vkggakdgnv agqetvlleq slekehkedg
     1141 pqqsagsiqg qnrveesvlp egsekseips ameestdgcq gcvedhkevn evqrtteetl
     1201 shdkefhsik aitpkeelfa nqepseqekl pvteltmdet rdecapegkp avqdktedet
     1261 sslgltaekl egegrtltvg secteavvtv vavktekqdg ipdseeqvct kgvpsrtpal
     1321 reeddavhng vkstevtvpe vlleskgkts alpsktvgse aaayaeqsmg ngsdrdiaak
     1381 dsvpiiepqc gdnttetpsk sgesrdgeve gaviksetql estsivaeap vqikadgasn
     1441 lasicpeive ngsavitdks pkkcetpssl ageetvgkgq elvetlncqg fqkedkknee
     1501 lldgakevfe ygkqeavrhd ecstavqqee gsgsafpqal ktpvalaaaa ggehvvaeta
     1561 trtdvtaetv eplattpeqm aseevpvsst dcsgcgtael gsveapkprv tcasmngvse
     1621 eqeqaqsagq aehngipssh slspshpefq dcvvhsvvie sqstkivlna iqsavhklae
     1681 teesaalese esiksvgksp sdvivpellg stqvdqqlpv kkegirskeq elkqpeivkt
     1741 atltesaeih apvektkdtp lisemlrdgq sqnsltvvts peeiprgsvr lqkstleqst
     1801 sedstkdtvd ihtpklreke vgyimeisdq htgqqtcres eeqpyhppve dgktqmwedd
     1861 scqegtscdr qsqnsvaltp
//
LOCUS       XP_041325625            1855 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchor protein 12 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325625
VERSION     XP_041325625.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469691.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1855
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1855
                     /product="A-kinase anchor protein 12 isoform X3"
                     /calculated_mol_wt=201255
     Region          <195..751
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          752..780
                     /region_name="WSK"
                     /note="WSK motif; pfam03832"
                     /db_xref="CDD:461069"
     Region          <922..1087
                     /region_name="rne"
                     /note="ribonuclease E; Reviewed; PRK10811"
                     /db_xref="CDD:236766"
     CDS             1..1855
                     /gene="AKAP12"
                     /coded_by="XM_041469691.1:375..5942"
                     /db_xref="GeneID:121354797"
ORIGIN      
        1 metnpsdsgt kdgvdaeked ahsikqlpal eevaedqvae pqsydlgfkk vfkfvgfrft
       61 vkkektgkse pvqlltvkke tqvpeggddq kevaseetav pedvssaedn tkdtlknekt
      121 edespkipea teicsqpaal atetasplrk lftqgwtgfr kkksfrkpke deqqspvkee
      181 ekekeettlt teisekeeqp esekqdeern vtavtveahe keqtegegqe sentlaatgv
      241 egsekkeavk hdeqgqkedl aaaavkesae gkkddqerkl vdvpenldke eekteegeke
      301 gevtekplkt ksvvplvtds vngelttsse glpvgekles mekhegddrt eiaseetcet
      361 gsvameissd qlrksegreg skhallgket ldekteegel kmsptaddva qgealdrtte
      421 kkeskehetk stlsapesks fsiseqsvdt ednqqsvkpa deglqvkpgt dttdtvkpde
      481 ttmevtseea agkrppegit neaellssqe ktklqgsplk klftgtglkk lsgkkqkgkr
      541 eesksgeqge piqhlsdspd speeqkgess asspeemnei psleksedgm qvtesedati
      601 pdverkrenv tpwasfkkmv tpkkrvrrps esdkeeeidk tknvavsaae navdenqgei
      661 qengidqkpe kiteepkrkv dtsvswetfi cvgsskkrar kssssdeesq kveesgqske
      721 tatdavltss qesdqgqgns speqagspse segistwesf krlvtprrrs ktrmeersed
      781 svvgsslehs tsdgepgkde swvpfrklmp grrkkksdgk pepahlkqar edmaeaaeed
      841 sdvpavvpls eyeaaeqekm eaqrakdaea mrkqtseeer aekleetltm gqgseglvha
      901 vgvtiveeer avssieersp swisaaltec ieqvreeeek etektaepgv tvedavvaae
      961 tvpetrkdas ddttaselel tseavtalet aepscaeetm evslaeette mvsavsqlet
     1021 pdtteeatpv qeveateenl keldkqtqkv lhevaervka dvtqtvseqa vtetiittvq
     1081 glesevkgga kdgnvagqet vlleqsleke hkedgpqqsa gsiqgqnrve esvlpegsek
     1141 seipsamees tdgcqgcved hkevnevqrt teetlshdke fhsikaitpk eelfanqeps
     1201 eqeklpvtel tmdetrdeca pegkpavqdk tedetsslgl taeklegegr tltvgsecte
     1261 avvtvvavkt ekqdgipdse eqvctkgvps rtpalreedd avhngvkste vtvpevlles
     1321 kgktsalpsk tvgseaaaya eqsmgngsdr diaakdsvpi iepqcgdntt etpsksgesr
     1381 dgevegavik setqlestsi vaeapvqika dgasnlasic peivengsav itdkspkkce
     1441 tpsslageet vgkgqelvet lncqgfqked kkneelldga kevfeygkqe avrhdecsta
     1501 vqqeegsgsa fpqalktpva laaaaggehv vaetatrtdv taetveplat tpeqmaseev
     1561 pvsstdcsgc gtaelgsvea pkprvtcasm ngvseeqeqa qsagqaehng ipsshslsps
     1621 hpefqdcvvh svviesqstk ivlnaiqsav hklaeteesa aleseesiks vgkspsdviv
     1681 pellgstqvd qqlpvkkegi rskeqelkqp eivktatlte saeihapvek tkdtplisem
     1741 lrdgqsqnsl tvvtspeeip rgsvrlqkst leqstsedst kdtvdihtpk lrekevgyim
     1801 eisdqhtgqq tcreseeqpy hppvedgktq mweddscqeg tscdrqsqns valtp
//
LOCUS       XP_041325626             169 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 28 [Pyrgilauda ruficollis].
ACCESSION   XP_041325626
VERSION     XP_041325626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..169
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..169
                     /product="small integral membrane protein 28"
                     /calculated_mol_wt=18989
     CDS             1..169
                     /gene="SMIM28"
                     /coded_by="XM_041469692.1:1..510"
                     /db_xref="GeneID:121354798"
ORIGIN      
        1 mrwllgsslk nfghadrgny dwlnsepggp lletelqsrq qssstkddie pflciilpat
       61 mmlflaflll flyrrcqrpt qqgqifsidl pealpehdvs nflsalpwss eqsfhystll
      121 pdatflsvcl ppsyeeatmk tsmeeahtel spdpvppyee stlqtsstk
//
LOCUS       XP_041325627             594 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 2, facilitated glucose transporter member 12
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325627
VERSION     XP_041325627.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469693.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..594
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..594
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 12 isoform X1"
                     /calculated_mol_wt=64242
     Region          46..556
                     /region_name="MFS_GLUT12_Class3"
                     /note="Glucose transporter type 12 (GLUT12), a Class 3
                     GLUT, of the Major Facilitator Superfamily of
                     transporters; cd17435"
                     /db_xref="CDD:340993"
     Site            order(58,62,176,179..180,183,293..294,298..299,302..303,
                     331,471..472,475..476,480,503..504,507)
                     /site_type="other"
                     /note="chemical substrate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:340993"
     CDS             1..594
                     /gene="SLC2A12"
                     /coded_by="XM_041469693.1:156..1940"
                     /db_xref="GeneID:121354799"
ORIGIN      
        1 mvpgqstedl sqqrqtmsag edeersrgcg csrlpaaagc gtftflssai aaisgllmgy
       61 elglisgall qmssiltlsc keqevivssl lfgalfaslt ggflidrfgr rlaiiiassl
      121 lvlgslillp yesyeilivg riaigisisl ssiatcvyia eiapqhrrgl lvslnelmiv
      181 igilfayisn yafasishgw kymfglvipl galqaiamyf lppsprflvm knndeaarkv
      241 lerlretsda tkeltvikss lkdehqysfl dlfrsknnmr armlvgltlv ffvqttgqpn
      301 ilfyastvlk svgfqsneaa slastgvglv kvvstvpatf fvdqvgsktf lcigssvmai
      361 slvtmgvvnr nihvnltkvc rsqspedfsl qrsgnfsvtn gslkdlfasm asterlsfdv
      421 qspnvartge lnrtapaggk sttgshvesg evpvvlkwls lasllvyvaa fsiglgpmsw
      481 lvlseifpgg irgramalts smnwginlli sltfltvtel iglswvcfiy timslaslaf
      541 vimfipetkg csleqismel akqkyvrtpl cgvsqrrekl vpvelakrek eqly
//
LOCUS       XP_041325628             565 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 2, facilitated glucose transporter member 12
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325628
VERSION     XP_041325628.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469694.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..565
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 12 isoform X2"
                     /calculated_mol_wt=60790
     Region          46..>479
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(58..59,62..63,66,98,148..149,151..153,156,176,
                     179..180,183,290,293..294,297..299,302,331,335,471..472,
                     476)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..565
                     /gene="SLC2A12"
                     /coded_by="XM_041469694.1:156..1853"
                     /db_xref="GeneID:121354799"
ORIGIN      
        1 mvpgqstedl sqqrqtmsag edeersrgcg csrlpaaagc gtftflssai aaisgllmgy
       61 elglisgall qmssiltlsc keqevivssl lfgalfaslt ggflidrfgr rlaiiiassl
      121 lvlgslillp yesyeilivg riaigisisl ssiatcvyia eiapqhrrgl lvslnelmiv
      181 igilfayisn yafasishgw kymfglvipl galqaiamyf lppsprflvm knndeaarkv
      241 lerlretsda tkeltvikss lkdehqysfl dlfrsknnmr armlvgltlv ffvqttgqpn
      301 ilfyastvlk svgfqsneaa slastgvglv kvvstvpatf fvdqvgsktf lcigssvmai
      361 slvtmgvvnr nihvnltkvc rsqspedfsl qrsgnfsvtn gslkdlfasm asterlsfdv
      421 qspnvartge lnrtapaggk sttgshvesg evpvvlkwls lasllvyvaa fsiglgptva
      481 fkcsfkavle kagkkeegsg kkaqgdwmka egftrkvksm evkkevhpss ihhclsytil
      541 sglwwslsmc figlvkarpr agill
//
LOCUS       XP_041325629             501 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 2, facilitated glucose transporter member 12
            isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325629
VERSION     XP_041325629.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469695.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 12 isoform X3"
                     /calculated_mol_wt=53962
     Region          46..>477
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(58..59,62..63,66,98,148..149,151..153,156,176,
                     179..180,183,290,293..294,297..299,302,331,335,471..472,
                     476)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..501
                     /gene="SLC2A12"
                     /coded_by="XM_041469695.1:156..1661"
                     /db_xref="GeneID:121354799"
ORIGIN      
        1 mvpgqstedl sqqrqtmsag edeersrgcg csrlpaaagc gtftflssai aaisgllmgy
       61 elglisgall qmssiltlsc keqevivssl lfgalfaslt ggflidrfgr rlaiiiassl
      121 lvlgslillp yesyeilivg riaigisisl ssiatcvyia eiapqhrrgl lvslnelmiv
      181 igilfayisn yafasishgw kymfglvipl galqaiamyf lppsprflvm knndeaarkv
      241 lerlretsda tkeltvikss lkdehqysfl dlfrsknnmr armlvgltlv ffvqttgqpn
      301 ilfyastvlk svgfqsneaa slastgvglv kvvstvpatf fvdqvgsktf lcigssvmai
      361 slvtmgvvnr nihvnltkvc rsqspedfsl qrsgnfsvtn gslkdlfasm asterlsfdv
      421 qspnvartge lnrtapaggk sttgshvesg evpvvlkwls lasllvyvaa fsiglgptlk
      481 qcwrkqgrrk kdqarklkei g
//
LOCUS       XP_041325630             481 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 2, facilitated glucose transporter member 12
            isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325630
VERSION     XP_041325630.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469696.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..481
                     /product="solute carrier family 2, facilitated glucose
                     transporter member 12 isoform X4"
                     /calculated_mol_wt=51387
     Region          46..>477
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(58..59,62..63,66,98,148..149,151..153,156,176,
                     179..180,183,290,293..294,297..299,302,331,335,471..472,
                     476)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..481
                     /gene="SLC2A12"
                     /coded_by="XM_041469696.1:156..1601"
                     /db_xref="GeneID:121354799"
ORIGIN      
        1 mvpgqstedl sqqrqtmsag edeersrgcg csrlpaaagc gtftflssai aaisgllmgy
       61 elglisgall qmssiltlsc keqevivssl lfgalfaslt ggflidrfgr rlaiiiassl
      121 lvlgslillp yesyeilivg riaigisisl ssiatcvyia eiapqhrrgl lvslnelmiv
      181 igilfayisn yafasishgw kymfglvipl galqaiamyf lppsprflvm knndeaarkv
      241 lerlretsda tkeltvikss lkdehqysfl dlfrsknnmr armlvgltlv ffvqttgqpn
      301 ilfyastvlk svgfqsneaa slastgvglv kvvstvpatf fvdqvgsktf lcigssvmai
      361 slvtmgvvnr nihvnltkvc rsqspedfsl qrsgnfsvtn gslkdlfasm asterlsfdv
      421 qspnvartge lnrtapaggk sttgshvesg evpvvlkwls lasllvyvaa fsiglgpsgf
      481 a
//
LOCUS       XP_041325631             183 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA box-binding protein-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325631
VERSION     XP_041325631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="TATA box-binding protein-like 1"
                     /calculated_mol_wt=20372
     Region          9..180
                     /region_name="TLF"
                     /note="TBP-like factors (TLF; also called TLP, TRF, TRP),
                     which are found in most metazoans. TLFs and TBPs have
                     well-conserved core domains; however, they only share
                     about 60% similarity. TLFs, like TBPs, interact with TFIIA
                     and TFIIB, which are part of the...; cd04517"
                     /db_xref="CDD:239953"
     Site            order(14..15,17,43..44,48,50,57,59,63,65,67,69,99,104,106,
                     135..136,141,152,154,156,160)
                     /site_type="other"
                     /note="putative DNA interaction surface [nucleotide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(29,36..38,40,44,50,52)
                     /site_type="other"
                     /note="putative TFIIA interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(116..117,129..133,136,141)
                     /site_type="other"
                     /note="putative TFIIB interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     CDS             1..183
                     /gene="TBPL1"
                     /coded_by="XM_041469697.1:258..809"
                     /db_xref="GeneID:121354800"
ORIGIN      
        1 mdadsdvald ilitnvvcvf rtrchlnlrk ialeganviy krdvgkvlmk lrkpritati
       61 wssgkvictg atseeeakfg arrlarslqk lgfqviftdf kvvnvlavcn mpfeirlpef
      121 tknnrphasy epelhpavcy rikslratlq ifstgsitvt gpnvkavasa veqiypfvfe
      181 srk
//
LOCUS       XP_041325632             183 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA box-binding protein-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325632
VERSION     XP_041325632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="TATA box-binding protein-like 1"
                     /calculated_mol_wt=20372
     Region          9..180
                     /region_name="TLF"
                     /note="TBP-like factors (TLF; also called TLP, TRF, TRP),
                     which are found in most metazoans. TLFs and TBPs have
                     well-conserved core domains; however, they only share
                     about 60% similarity. TLFs, like TBPs, interact with TFIIA
                     and TFIIB, which are part of the...; cd04517"
                     /db_xref="CDD:239953"
     Site            order(14..15,17,43..44,48,50,57,59,63,65,67,69,99,104,106,
                     135..136,141,152,154,156,160)
                     /site_type="other"
                     /note="putative DNA interaction surface [nucleotide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(29,36..38,40,44,50,52)
                     /site_type="other"
                     /note="putative TFIIA interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(116..117,129..133,136,141)
                     /site_type="other"
                     /note="putative TFIIB interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     CDS             1..183
                     /gene="TBPL1"
                     /coded_by="XM_041469698.1:182..733"
                     /db_xref="GeneID:121354800"
ORIGIN      
        1 mdadsdvald ilitnvvcvf rtrchlnlrk ialeganviy krdvgkvlmk lrkpritati
       61 wssgkvictg atseeeakfg arrlarslqk lgfqviftdf kvvnvlavcn mpfeirlpef
      121 tknnrphasy epelhpavcy rikslratlq ifstgsitvt gpnvkavasa veqiypfvfe
      181 srk
//
LOCUS       XP_041325633             183 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA box-binding protein-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325633
VERSION     XP_041325633.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469699.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="TATA box-binding protein-like 1"
                     /calculated_mol_wt=20372
     Region          9..180
                     /region_name="TLF"
                     /note="TBP-like factors (TLF; also called TLP, TRF, TRP),
                     which are found in most metazoans. TLFs and TBPs have
                     well-conserved core domains; however, they only share
                     about 60% similarity. TLFs, like TBPs, interact with TFIIA
                     and TFIIB, which are part of the...; cd04517"
                     /db_xref="CDD:239953"
     Site            order(14..15,17,43..44,48,50,57,59,63,65,67,69,99,104,106,
                     135..136,141,152,154,156,160)
                     /site_type="other"
                     /note="putative DNA interaction surface [nucleotide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(29,36..38,40,44,50,52)
                     /site_type="other"
                     /note="putative TFIIA interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(116..117,129..133,136,141)
                     /site_type="other"
                     /note="putative TFIIB interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     CDS             1..183
                     /gene="TBPL1"
                     /coded_by="XM_041469699.1:259..810"
                     /db_xref="GeneID:121354800"
ORIGIN      
        1 mdadsdvald ilitnvvcvf rtrchlnlrk ialeganviy krdvgkvlmk lrkpritati
       61 wssgkvictg atseeeakfg arrlarslqk lgfqviftdf kvvnvlavcn mpfeirlpef
      121 tknnrphasy epelhpavcy rikslratlq ifstgsitvt gpnvkavasa veqiypfvfe
      181 srk
//
LOCUS       XP_041325634             183 aa            linear   VRT 06-MAY-2021
DEFINITION  TATA box-binding protein-like 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325634
VERSION     XP_041325634.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469700.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="TATA box-binding protein-like 1"
                     /calculated_mol_wt=20372
     Region          9..180
                     /region_name="TLF"
                     /note="TBP-like factors (TLF; also called TLP, TRF, TRP),
                     which are found in most metazoans. TLFs and TBPs have
                     well-conserved core domains; however, they only share
                     about 60% similarity. TLFs, like TBPs, interact with TFIIA
                     and TFIIB, which are part of the...; cd04517"
                     /db_xref="CDD:239953"
     Site            order(14..15,17,43..44,48,50,57,59,63,65,67,69,99,104,106,
                     135..136,141,152,154,156,160)
                     /site_type="other"
                     /note="putative DNA interaction surface [nucleotide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(29,36..38,40,44,50,52)
                     /site_type="other"
                     /note="putative TFIIA interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     Site            order(116..117,129..133,136,141)
                     /site_type="other"
                     /note="putative TFIIB interaction surface [polypeptide
                     binding]"
                     /db_xref="CDD:239953"
     CDS             1..183
                     /gene="TBPL1"
                     /coded_by="XM_041469700.1:183..734"
                     /db_xref="GeneID:121354800"
ORIGIN      
        1 mdadsdvald ilitnvvcvf rtrchlnlrk ialeganviy krdvgkvlmk lrkpritati
       61 wssgkvictg atseeeakfg arrlarslqk lgfqviftdf kvvnvlavcn mpfeirlpef
      121 tknnrphasy epelhpavcy rikslratlq ifstgsitvt gpnvkavasa veqiypfvfe
      181 srk
//
LOCUS       XP_041325635             300 aa            linear   VRT 06-MAY-2021
DEFINITION  ethylmalonyl-CoA decarboxylase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325635
VERSION     XP_041325635.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469701.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="ethylmalonyl-CoA decarboxylase isoform X1"
                     /calculated_mol_wt=32580
     Region          55..287
                     /region_name="CaiD"
                     /note="Enoyl-CoA hydratase/carnithine racemase [Lipid
                     transport and metabolism]; COG1024"
                     /db_xref="CDD:440647"
     CDS             1..300
                     /gene="ECHDC1"
                     /coded_by="XM_041469701.1:93..995"
                     /db_xref="GeneID:121354802"
ORIGIN      
        1 malalwknfl qitikrvlqr rrlslyngah gyeeelikkk lqqfsggsin lskedngiai
       61 ltlnnpklmn aftgtmmvel qervtelenw kdgkgliihg agntfcsgsd lnvvkeisns
      121 qdgmnmcmfm qntltrlmrl plisvalvqg kafgggaelt tacdfrlmtp gseirfvhkh
      181 mglvpgwggg arlvrivgsg aalrllagaa rldperalsl glseetllss dgtralgear
      241 awlsqytegp atviravkkv vtagrelple aalrtekdif gtvwggpanl qalvrrpkhk
//
LOCUS       XP_041325637             300 aa            linear   VRT 06-MAY-2021
DEFINITION  ethylmalonyl-CoA decarboxylase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325637
VERSION     XP_041325637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="ethylmalonyl-CoA decarboxylase isoform X1"
                     /calculated_mol_wt=32580
     Region          55..287
                     /region_name="CaiD"
                     /note="Enoyl-CoA hydratase/carnithine racemase [Lipid
                     transport and metabolism]; COG1024"
                     /db_xref="CDD:440647"
     CDS             1..300
                     /gene="ECHDC1"
                     /coded_by="XM_041469703.1:74..976"
                     /db_xref="GeneID:121354802"
ORIGIN      
        1 malalwknfl qitikrvlqr rrlslyngah gyeeelikkk lqqfsggsin lskedngiai
       61 ltlnnpklmn aftgtmmvel qervtelenw kdgkgliihg agntfcsgsd lnvvkeisns
      121 qdgmnmcmfm qntltrlmrl plisvalvqg kafgggaelt tacdfrlmtp gseirfvhkh
      181 mglvpgwggg arlvrivgsg aalrllagaa rldperalsl glseetllss dgtralgear
      241 awlsqytegp atviravkkv vtagrelple aalrtekdif gtvwggpanl qalvrrpkhk
//
LOCUS       XP_041325638             300 aa            linear   VRT 06-MAY-2021
DEFINITION  ethylmalonyl-CoA decarboxylase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325638
VERSION     XP_041325638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469704.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="ethylmalonyl-CoA decarboxylase isoform X1"
                     /calculated_mol_wt=32580
     Region          55..287
                     /region_name="CaiD"
                     /note="Enoyl-CoA hydratase/carnithine racemase [Lipid
                     transport and metabolism]; COG1024"
                     /db_xref="CDD:440647"
     CDS             1..300
                     /gene="ECHDC1"
                     /coded_by="XM_041469704.1:26..928"
                     /db_xref="GeneID:121354802"
ORIGIN      
        1 malalwknfl qitikrvlqr rrlslyngah gyeeelikkk lqqfsggsin lskedngiai
       61 ltlnnpklmn aftgtmmvel qervtelenw kdgkgliihg agntfcsgsd lnvvkeisns
      121 qdgmnmcmfm qntltrlmrl plisvalvqg kafgggaelt tacdfrlmtp gseirfvhkh
      181 mglvpgwggg arlvrivgsg aalrllagaa rldperalsl glseetllss dgtralgear
      241 awlsqytegp atviravkkv vtagrelple aalrtekdif gtvwggpanl qalvrrpkhk
//
LOCUS       XP_041325639             300 aa            linear   VRT 06-MAY-2021
DEFINITION  ethylmalonyl-CoA decarboxylase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325639
VERSION     XP_041325639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="ethylmalonyl-CoA decarboxylase isoform X1"
                     /calculated_mol_wt=32580
     Region          55..287
                     /region_name="CaiD"
                     /note="Enoyl-CoA hydratase/carnithine racemase [Lipid
                     transport and metabolism]; COG1024"
                     /db_xref="CDD:440647"
     CDS             1..300
                     /gene="ECHDC1"
                     /coded_by="XM_041469705.1:26..928"
                     /db_xref="GeneID:121354802"
ORIGIN      
        1 malalwknfl qitikrvlqr rrlslyngah gyeeelikkk lqqfsggsin lskedngiai
       61 ltlnnpklmn aftgtmmvel qervtelenw kdgkgliihg agntfcsgsd lnvvkeisns
      121 qdgmnmcmfm qntltrlmrl plisvalvqg kafgggaelt tacdfrlmtp gseirfvhkh
      181 mglvpgwggg arlvrivgsg aalrllagaa rldperalsl glseetllss dgtralgear
      241 awlsqytegp atviravkkv vtagrelple aalrtekdif gtvwggpanl qalvrrpkhk
//
LOCUS       XP_041325640             183 aa            linear   VRT 06-MAY-2021
DEFINITION  ethylmalonyl-CoA decarboxylase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325640
VERSION     XP_041325640.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469706.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="ethylmalonyl-CoA decarboxylase isoform X2"
                     /calculated_mol_wt=19487
     Region          <1..170
                     /region_name="CaiD"
                     /note="Enoyl-CoA hydratase/carnithine racemase [Lipid
                     transport and metabolism]; COG1024"
                     /db_xref="CDD:440647"
     CDS             1..183
                     /gene="ECHDC1"
                     /coded_by="XM_041469706.1:141..692"
                     /db_xref="GeneID:121354802"
ORIGIN      
        1 mplqdgmnmc mfmqntltrl mrlplisval vqgkafggga elttacdfrl mtpgseirfv
       61 hkhmglvpgw gggarlvriv gsgaalrlla gaarldpera lslglseetl lssdgtralg
      121 earawlsqyt egpatvirav kkvvtagrel pleaalrtek difgtvwggp anlqalvrrp
      181 khk
//
LOCUS       XP_041325641             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325641
VERSION     XP_041325641.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469707.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469707.1:323..1381"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325643             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325643
VERSION     XP_041325643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469709.1:794..1852"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325644             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325644
VERSION     XP_041325644.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469710.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469710.1:543..1601"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325645             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325645
VERSION     XP_041325645.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469711.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469711.1:574..1632"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325646             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325646
VERSION     XP_041325646.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469712.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469712.1:664..1722"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325647             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325647
VERSION     XP_041325647.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469713.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469713.1:453..1511"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325648             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325648
VERSION     XP_041325648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469714.1:444..1502"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325649             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325649
VERSION     XP_041325649.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469715.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469715.1:176..1234"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325650             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325650
VERSION     XP_041325650.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469716.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469716.1:520..1578"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325651             352 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF146 [Pyrgilauda ruficollis].
ACCESSION   XP_041325651
VERSION     XP_041325651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469717.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="E3 ubiquitin-protein ligase RNF146"
                     /calculated_mol_wt=37874
     Region          34..83
                     /region_name="RING-HC_RNF146"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 146 (RNF146) and similar proteins; cd16546"
                     /db_xref="CDD:438208"
     Site            order(37..38,40,69,71..72)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438208"
     Region          103..175
                     /region_name="WWE"
                     /note="Domain in Deltex and TRIP12 homologues. Possibly
                     involved in regulation of ubiquitin-mediated proteolysis;
                     smart00678"
                     /db_xref="CDD:128922"
     CDS             1..352
                     /gene="RNF146"
                     /coded_by="XM_041469717.1:297..1355"
                     /db_xref="GeneID:121354803"
ORIGIN      
        1 magcgeidhs inmlptnrkt nesctnaaps lqvpecaicl qtcvhpvslp ckhvfcylcv
       61 kgaswlgkrc alcrqeiped fldkptllsp eelkaasrgn geyawyyegr ngwwqydert
      121 sreledafsk gkkstemlia gflyvadlen mvqyrrnehg rrrkikrdii dipkkgvagl
      181 rldcdtntvs laressadga dstltpgaaa vqplasisvr plpaldgqlv spstpspdas
      241 nslensfshl qingdsmaer shrgegeedr essssgrvpg pdtsveetes dassdsedvs
      301 ahlqqhpssg qqrhlsagas qagadrpgag ggvantsvrs rrpdgqctvt ev
//
LOCUS       XP_041325653             179 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L18, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041325653
VERSION     XP_041325653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="39S ribosomal protein L18, mitochondrial"
                     /calculated_mol_wt=20407
     Region          66..169
                     /region_name="Ribosomal_L18_L5e"
                     /note="Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein
                     found in the central protuberance (CP) of the large
                     subunit. L18 binds 5S rRNA and induces a conformational
                     change that stimulates the binding of L5 to 5S rRNA.
                     Association of 5S rRNA with 23S rRNA...; cd00432"
                     /db_xref="CDD:238246"
     Site            order(66,69..70,144,147,165)
                     /site_type="other"
                     /note="23S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            66
                     /site_type="other"
                     /note="L21e interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     Site            order(68,70..71,73,78,82..87,89,91,98..100,102,143,156)
                     /site_type="other"
                     /note="5S rRNA interface [nucleotide binding]"
                     /db_xref="CDD:238246"
     Site            order(68,71..72)
                     /site_type="other"
                     /note="L27 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     Site            149
                     /site_type="other"
                     /note="L5 interface [polypeptide binding]"
                     /db_xref="CDD:238246"
     CDS             1..179
                     /gene="MRPL18"
                     /coded_by="XM_041469719.1:101..640"
                     /db_xref="GeneID:121354805"
ORIGIN      
        1 malssrllla agglraagvr fasttasvkt etevdtsene vvapnftnrn prnleqmala
       61 rkergwkttw pkrefwhrlr lertqhyvea fversngdvv lsastrewai krhlyspkgv
      121 aacrnlgrvm aqrcleagin fvnfkaiipw ehrcdsiqef ekamkeggvv lheprriyr
//
LOCUS       XP_041325654             559 aa            linear   VRT 06-MAY-2021
DEFINITION  T-complex protein 1 subunit alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041325654
VERSION     XP_041325654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="T-complex protein 1 subunit alpha"
                     /calculated_mol_wt=60360
     Region          12..538
                     /region_name="TCP1_alpha"
                     /note="TCP-1 (CTT or eukaryotic type II) chaperonin
                     family, alpha subunit. Chaperonins are involved in
                     productive folding of proteins. They share a common
                     general morphology, a double toroid of 2 stacked rings. In
                     contrast to bacterial group I chaperonins...; cd03335"
                     /db_xref="CDD:239451"
     Site            order(12,16,44..47,49,67,69,73,77,80,385,529..535)
                     /site_type="other"
                     /note="ring oligomerisation interface [polypeptide
                     binding]"
                     /db_xref="CDD:239451"
     Site            order(39..41,91,95,157,397,415,455,506,508)
                     /site_type="other"
                     /note="ATP/Mg binding site [chemical binding]"
                     /db_xref="CDD:239451"
     Site            order(435,453,462,464..465,468)
                     /site_type="active"
                     /note="stacking interactions [active]"
                     /db_xref="CDD:239451"
     CDS             1..559
                     /gene="TCP1"
                     /coded_by="XM_041469720.1:106..1785"
                     /db_xref="GeneID:121354806"
ORIGIN      
        1 mstmegplav fgertsgdtv rtqnvtaasa ianivksslg pvgldkmlvd digdvtitnd
       61 gatilkllev ehpaakvlce ladlqdkevg dgttsvviia aellknadel vkqkihptsi
      121 iggyrlacke avryinenlv intdelgrec linaaktsms skiigvdgdf fanmvvdaal
      181 avkytdqkgq arypinsvnv lkahgrsqke silvngyaln cvvgsqgmtk rivnakiacl
      241 dfslqkakmk lgvqvvisdp ekldqirqre sditkeriqk ilatganvil ttggiddmcl
      301 kyfvdagama vrrvvkkdlk riakasgati cstlanlege esfealmlgq aeeviqeric
      361 ddeliliknt kartsasiil rgandfmcde mersihdalc vvkrvlesks vvpgggavea
      421 alsiylenya tsmgsreqla iaefarsllv ipntlavnaa qdatdlvakl rafhneaqvn
      481 pdrknlkwig ldlingkprd nkqagvfept mvktkslkfa teaaitilri ddliklhpet
      541 keerggcyed avqsgalee
//
LOCUS       XP_041325655             394 aa            linear   VRT 06-MAY-2021
DEFINITION  acetyl-CoA acetyltransferase, cytosolic [Pyrgilauda ruficollis].
ACCESSION   XP_041325655
VERSION     XP_041325655.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469721.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..394
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..394
                     /product="acetyl-CoA acetyltransferase, cytosolic"
                     /calculated_mol_wt=40934
     Region          6..394
                     /region_name="PRK05790"
                     /note="putative acyltransferase; Provisional"
                     /db_xref="CDD:180261"
     CDS             1..394
                     /gene="ACAT2"
                     /coded_by="XM_041469721.1:258..1442"
                     /db_xref="GeneID:121354807"
ORIGIN      
        1 msadpvvfvs aartavgsfn gglsslpahe lgaatirevl rraglapeev sevilgqvlt
       61 agagqnpvrq asvaagipys vpawscqmic gsglkavcla aqsilmgess vvvaggmesm
      121 skaphvihmr agvrmgeasl qdtiifdglt dafyqyhmgi taenvakkwq vsrgeqdqla
      181 vesqnraeaa qkagyftkei vpvlvpskkg pievkidehp rhgsnletma klkpcfltdg
      241 tgtvtaanas glndgaaavl lmkkseaarr glkplarivs waqtgidpsi mgvgpisair
      301 kaidkagwsl eqvdlfeine afaslslaia kelkvnleki nvqggaialg hplgasgcri
      361 lvtllyaler tggkrgvaal cigggmgiam cver
//
LOCUS       XP_041325656            2895 aa            linear   VRT 06-MAY-2021
DEFINITION  utrophin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325656
VERSION     XP_041325656.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469722.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2895
                     /product="utrophin-like isoform X1"
                     /calculated_mol_wt=332062
     Region          38..778
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          433..646
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Region          521..1243
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Site            539..544
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          651..844
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            751..756
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1279..1543
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1438..1443
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1442..1651
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1546..1551
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1701..1906
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1802..1807
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1910..2154
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            order(2021..2025,2027)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2156..>2266
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2262..2266
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2281..2309
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(2293,2304)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          2346..2507
                     /region_name="EFh_UTRO"
                     /note="EF-hand-like motif found in utrophin; cd16247"
                     /db_xref="CDD:320005"
     Region          2346..2385
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2392..2426
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2432..2468
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2481..2507
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2532..2580
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(2534,2537,2549,2552,2558,2561,2571,2575)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(2534,2537,2558,2561)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(2535,2546,2548,2554,2556)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(2547,2562,2577,2580)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(2549,2552,2571,2575)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     CDS             1..2895
                     /gene="LOC121354808"
                     /coded_by="XM_041469722.1:148..8835"
                     /db_xref="GeneID:121354808"
ORIGIN      
        1 mgmkrqtldq lnelgqdvaq ilgngkasgk idqdqeeltq rwdslvqkle dysnqvtqav
       61 gsigmsqvsq ktaaetplke qvvvkqsrqe lpppplpkkr qipgdseakk kfdaestell
      121 nwiaksksai qaadikeykk mretssmkek lkviekerpe ksqkldelkr sgrilldqmg
      181 kdglptvdik svmekilsgw kdvvqnleev arkikyqedi naylkeinel ektliekddw
      241 lkdsssasqs savlkdlcqe lthlislspq lehlkatckt ltsqpmppnf iqenlsgfld
      301 hfkltrqkle erhqqlkket erqpsreyve slqqlkdtls elegkqhsia gglsepskve
      361 salqqaktvc etleaqkprv dklaeetkal ekhasldikn tymqefkdvq grwdklklki
      421 skdvklleei mpklrlfetd skvvqkwmdg vkdflmteka vqgdteglqr qldqctvfin
      481 emetiepslk emkeveaalr aqpiasintw tksrlvdcqt qweklskqii tqknrlsesq
      541 ekavnlkkdl aemqewmtqa eeeylekdfe ykspeelena veemkraked vlqkevrvki
      601 lkdnikmlat kvpssgqdla telnvvleny qllcnrirgk chtleevwsc wiellqyldl
      661 etawlnnlee rvqmtenlpd kldavndale slesvlrhpa dnrtqirelg qtlidggild
      721 diisekleaf naryeelshl avsrqialeq qlqtmretdh mlqvlqeslg dldrqltsyl
      781 tdridafqmp qeaqkiqaei aahestleel kksarsfppa specrsprgg tqldalqrkl
      841 revctkyqlf qkpanfeqrm ldckrvldgv kaelhvldvk dtdpdviqah lekcmklykt
      901 lsevklevet viktgrqivq kqqtdnpkgm deqltalkfl yndlgaqvte gkqdleratq
      961 larkmrkesa slsewlatte adlvqkstse sllsdldsei awaknvlrel errkadlksi
     1021 tesctalqsl vegsetvlee klcvlnagws rvrtwtedwc dtllnhqgql eifdenvahi
     1081 stwlyqaeal ldeiekksas qkeetvkrlt selddvslrv dnvrdqavil mngrgvscre
     1141 lvepklaeln rnfekvsqhi ksakmligqe rlpamsepre arvafldldk fesdiqnmlk
     1201 vvekhlelng edekldqera qieevlqrgg qllqqpmeeh rrekirlqll llqkkynslq
     1261 ecrsfqrrqa velspvfsqy kkehdslmkw lneaedrlsg lqgvedeqkl qaipvqqklk
     1321 gqfatgvrtl pfsaeylvei nkvllamadv elllnapeln tgiyedfsaq edalknikdi
     1381 ldklgdqiav ihekqpdvil easgpeaiqi gdaltqlnae wdrinrmynd rkccfdraie
     1441 awrqfhcdln dlshwiaeae vlladahgpd gslelqaagl hqqeleegvt shqtsisaln
     1501 rtgegiiqkl satdgsflqe klaglnrrwk aittevmdrq qrlkgenqql ieyrkkldel
     1561 rcwlenvena ldtrfafnhe enlqelqvls eemevlggkl ewlnrtesev lldkntdlqe
     1621 knklsaclqs lnvrwnkvfr evpdkvrele afvgqsrfvt ktkppdiqkv vlasssleip
     1681 vqtqqalels apadldktrt eladwlvlid qmlksnivtv gnseeinrti armkitnadm
     1741 dhrhpqldsv ftlaqnlknk tsssdirtei tekmeklknq wdntqhsvev rqqqlkhmla
     1801 dslqwhdqrq emehlmeqce irlrvllqap kevlakqiae skllvqdlhr gditvaafnd
     1861 lsnkllreyr dddsrkvket tdqmntcwvn lnqravdrqn flememrtvq ashkdlesfl
     1921 kwlqeaettv nvladasere ntaqdsvyir elrkqmqdiq aeidahndif ksidgnrqkm
     1981 vkalgnseea allqhrlddm nqrwndlkak sanirahlea saekwnrllt sleelikwln
     2041 akdeelkkqm pvggdvptlq qqydhcralr relkekeqtv lnavdqarvf ladqpiegpe
     2101 eprrslhskt eltpeekalk iakamrkqss evkekwenln asasiwqkqv dkaleklkdl
     2161 qcamddldad lkeaenvrng wkpvgdllid slpdhiektt afrdeiapin lkvktvndls
     2221 sqlspldlyp slkmsrqldd lnmrwkllqv svedrlkqlq eahrdfgpas qhflstsvqf
     2281 pwqrsvshnk vpyyinhetq ttcwdhpkmt dlfqsladln nvrfsayrta ikirrlqkal
     2341 cldlldlntt sevfkqhkls qndqligvqd visclttiys gleekhkdmv nvplcvdmcl
     2401 nwllnvydsg rtgkirvqsl kiglmslskg lleekyrylf kevagptemc dqrqlglllh
     2461 daiqiprqlg evaafggsni epsvrscfqq nnnkpeitvk qfidwmrlep qsmvwlpvlh
     2521 rvaaaetakh qakcnickec pivgfryrsl khfnydvcqs cffsgrtakg hklhypmvey
     2581 cipttsgedv rdftkvlknk frskkyfakh prlgylpvqt vlegdnletp itlismwpeq
     2641 ydpsqspqlf hddthsrieq yatrlaqmer tngsflmdss sttgsvedeh aliqqycqtl
     2701 ggespvsqpq spaqilksve keergeleri iadleeeqrs lqieyeqlke qhlrrginpl
     2761 asppdsvvsp qhasedaeli aeakllrqhk grlearmqil edhnkqlesq lhrlrqlleq
     2821 pesdsrvnga spcaspqhsa lgfpleqdts sqfhqtddll vpphdtntdl tdvmeqinnt
     2881 fpaccssfag rpqam
//
LOCUS       XP_041325657            2630 aa            linear   VRT 06-MAY-2021
DEFINITION  utrophin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325657
VERSION     XP_041325657.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469723.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2630
                     /product="utrophin-like isoform X2"
                     /calculated_mol_wt=302238
     Region          38..779
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          434..647
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Region          522..1244
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Site            540..545
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          652..845
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            752..757
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1280..1544
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1439..1444
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1443..1652
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1547..1552
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1702..1907
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            1803..1808
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1911..2155
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            order(2022..2026,2028)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2157..>2267
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2263..2267
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2282..2310
                     /region_name="WW"
                     /note="Two conserved tryptophans domain; also known as the
                     WWP or rsp5 domain; around 40 amino acids; functions as an
                     interaction module in a diverse set of signalling
                     proteins; binds specific proline-rich sequences but at low
                     affinities compared to other...; cd00201"
                     /db_xref="CDD:238122"
     Site            order(2294,2305)
                     /site_type="active"
                     /note="binding pocket [active]"
                     /db_xref="CDD:238122"
     Region          2347..2508
                     /region_name="EFh_UTRO"
                     /note="EF-hand-like motif found in utrophin; cd16247"
                     /db_xref="CDD:320005"
     Region          2347..2386
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2393..2427
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2433..2469
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2482..2508
                     /region_name="EF-hand-like motif"
                     /note="EF-hand-like motif [structural motif]"
                     /db_xref="CDD:320005"
     Region          2533..2581
                     /region_name="ZZ_dystrophin"
                     /note="Zinc finger, ZZ type. Zinc finger present in
                     dystrophin and dystrobrevin. The ZZ motif coordinates two
                     zinc ions and most likely participates in ligand binding
                     or molecular scaffolding. Dystrophin attaches actin
                     filaments to an integral membrane...; cd02334"
                     /db_xref="CDD:239074"
     Site            order(2535,2538,2550,2553,2559,2562,2572,2576)
                     /site_type="other"
                     /note="Zinc-binding sites [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(2535,2538,2559,2562)
                     /site_type="other"
                     /note="zinc cluster 1 [ion binding]"
                     /db_xref="CDD:239074"
     Site            order(2536,2547,2549,2555,2557)
                     /site_type="active"
                     /note="putative charged binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(2548,2563,2578,2581)
                     /site_type="active"
                     /note="putative hydrophobic binding surface [active]"
                     /db_xref="CDD:239074"
     Site            order(2550,2553,2572,2576)
                     /site_type="other"
                     /note="zinc cluster 2 [ion binding]"
                     /db_xref="CDD:239074"
     CDS             1..2630
                     /gene="LOC121354808"
                     /coded_by="XM_041469723.1:148..8040"
                     /db_xref="GeneID:121354808"
ORIGIN      
        1 mgmkrqtldq lnelgqdvaq ilgngkasgk idqdqeeltq rwdslvqkle dysnqvtqav
       61 gsigmsqvsq ktaaetplke qvvvkqsrqe lpppplpkkr qipgdseakk kfdaestell
      121 nwiaksksai qaadikeykk mretssmkek lkviekerpe ksqkldelkr sgrilldqmg
      181 kdglptvdik svmekilsgw kdvvqnleev arkikyqedi naylkeinel ektliekddw
      241 lkdsssasqs savlkdlcqq elthlislsp qlehlkatck tltsqpmppn fiqenlsgfl
      301 dhfkltrqkl eerhqqlkke terqpsreyv eslqqlkdtl selegkqhsi agglsepskv
      361 esalqqaktv cetleaqkpr vdklaeetka lekhasldik ntymqefkdv qgrwdklklk
      421 iskdvkllee impklrlfet dskvvqkwmd gvkdflmtek avqgdteglq rqldqctvfi
      481 nemetiepsl kemkeveaal raqpiasint wtksrlvdcq tqweklskqi itqknrlses
      541 qekavnlkkd laemqewmtq aeeeylekdf eykspeelen aveemkrake dvlqkevrvk
      601 ilkdnikmla tkvpssgqdl atelnvvlen yqllcnrirg kchtleevws cwiellqyld
      661 letawlnnle ervqmtenlp dkldavndal eslesvlrhp adnrtqirel gqtlidggil
      721 ddiiseklea fnaryeelsh lavsrqiale qqlqtmretd hmlqvlqesl gdldrqltsy
      781 ltdridafqm pqeaqkiqae iaahestlee lkksarsfpp aspecrsprg gtqldalqrk
      841 lrevctkyql fqkpanfeqr mldckrvldg vkaelhvldv kdtdpdviqa hlekcmklyk
      901 tlsevkleve tviktgrqiv qkqqtdnpkg mdeqltalkf lyndlgaqvt egkqdlerat
      961 qlarkmrkes aslsewlatt eadlvqksts esllsdldse iawaknvlre lerrkadlks
     1021 itesctalqs lvegsetvle eklcvlnagw srvrtwtedw cdtllnhqgq leifdenvah
     1081 istwlyqaea lldeiekksa sqkeetvkrl tselddvslr vdnvrdqavi lmngrgvscr
     1141 elvepklael nrnfekvsqh iksakmligq erlpamsepr earvafldld kfesdiqnml
     1201 kvvekhleln gedekldqer aqieevlqrg gqllqqpmee hrrekirlql lllqkkynsl
     1261 qecrsfqrrq avelspvfsq ykkehdslmk wlneaedrls glqgvedeqk lqaipvqqkl
     1321 kgqfatgvrt lpfsaeylve inkvllamad velllnapel ntgiyedfsa qedalknikd
     1381 ildklgdqia vihekqpdvi leasgpeaiq igdaltqlna ewdrinrmyn drkccfdrai
     1441 eawrqfhcdl ndlshwiaea evlladahgp dgslelqaag lhqqeleegv tshqtsisal
     1501 nrtgegiiqk lsatdgsflq eklaglnrrw kaittevmdr qqrlkgenqq lieyrkklde
     1561 lrcwlenven aldtrfafnh eenlqelqvl seemevlggk lewlnrtese vlldkntdlq
     1621 eknklsaclq slnvrwnkvf revpdkvrel eafvgqsrfv tktkppdiqk vvlassslei
     1681 pvqtqqalel sapadldktr teladwlvli dqmlksnivt vgnseeinrt iarmkitnad
     1741 mdhrhpqlds vftlaqnlkn ktsssdirte itekmeklkn qwdntqhsve vrqqqlkhml
     1801 adslqwhdqr qemehlmeqc eirlrvllqa pkevlakqia eskllvqdlh rgditvaafn
     1861 dlsnkllrey rdddsrkvke ttdqmntcwv nlnqravdrq nflememrtv qashkdlesf
     1921 lkwlqeaett vnvladaser entaqdsvyi relrkqmqdi qaeidahndi fksidgnrqk
     1981 mvkalgnsee aallqhrldd mnqrwndlka ksanirahle asaekwnrll tsleelikwl
     2041 nakdeelkkq mpvggdvptl qqqydhcral rrelkekeqt vlnavdqarv fladqpiegp
     2101 eeprrslhsk teltpeekal kiakamrkqs sevkekwenl nasasiwqkq vdkaleklkd
     2161 lqcamddlda dlkeaenvrn gwkpvgdlli dslpdhiekt tafrdeiapi nlkvktvndl
     2221 ssqlspldly pslkmsrqld dlnmrwkllq vsvedrlkql qeahrdfgpa sqhflstsvq
     2281 fpwqrsvshn kvpyyinhet qttcwdhpkm tdlfqsladl nnvrfsayrt aikirrlqka
     2341 lcldlldlnt tsevfkqhkl sqndqligvq dvisclttiy sgleekhkdm vnvplcvdmc
     2401 lnwllnvyds grtgkirvqs lkiglmslsk glleekyryl fkevagptem cdqrqlglll
     2461 hdaiqiprql gevaafggsn iepsvrscfq qnnnkpeitv kqfidwmrle pqsmvwlpvl
     2521 hrvaaaetak hqakcnicke cpivgfryrs lkhfnydvcq scffsgrtak ghklhypmve
     2581 ycipttsged vrdftkvlkn kfrskkyfak hprlgylpvq tvlegdnlet
//
LOCUS       XP_041325658             507 aa            linear   VRT 06-MAY-2021
DEFINITION  utrophin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325658
VERSION     XP_041325658.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469724.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="utrophin-like isoform X1"
                     /calculated_mol_wt=58020
     Region          36..142
                     /region_name="CH_UTRN_rpt1"
                     /note="first calponin homology (CH) domain found in
                     utrophin and similar proteins; cd21232"
                     /db_xref="CDD:409081"
     Site            order(38,40..41,44..45,48,51..52,133,140..141)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409081"
     Site            order(38,42,93,95..96,99..100,102,111..119,124,126..127,
                     129..130,133..134,137)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409081"
     Region          157..260
                     /region_name="CH_UTRN_rpt2"
                     /note="second calponin homology (CH) domain found in
                     utrophin and similar proteins; cd21234"
                     /db_xref="CDD:409083"
     Site            order(157,161,211,213..214,217..218,220,229..237,244,
                     246..247,249..250,253..254,257)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409083"
     Site            order(160..161,163..164,167,228,230..232,234,237,244,
                     246..247,250,253..254,256..257)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409083"
     Region          316..506
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            order(424..426,429..431)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     CDS             1..507
                     /gene="LOC121354809"
                     /coded_by="XM_041469724.1:13..1536"
                     /db_xref="GeneID:121354809"
ORIGIN      
        1 mnvqtaqkav wkkykvaapr htdrqtffap ldehndvqkk tftkwinarf sksgkapvkd
       61 mftdlkdgrk lldllegltg kplpkergst rvhalnnvnr vlqvlhqnnv elvniggtdi
      121 vdgnhkltlg llwsiilhwq vkdvmknims dlqqtnseki llswvrqstr pysqvnvlnf
      181 ttswadglaf navihrhkpe lfswdkvtkm spverlenaf niaknhlgie klldpedvav
      241 qlpdkksiim yltslfevlp kqvtmedire vetlprrykq ecedgefsvq qtvsleenqd
      301 ssraetpstv tevdmdldsy qvaleevltw llsaedafre qeeisgdvee vkeqfstheg
      361 fmmeltahqs svgnvlqagn qlvaqgnlsp eeefeiqeqm lllnsrweel rvesmdrqsr
      421 lhdmlmelqk qqlqqlsdwl tvteeriqkm esqllaedle slqkqleehk slqsdleaeq
      481 vkvnslthmv vivdessges atailay
//
LOCUS       XP_041325659             502 aa            linear   VRT 06-MAY-2021
DEFINITION  utrophin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325659
VERSION     XP_041325659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="utrophin-like isoform X2"
                     /calculated_mol_wt=57179
     Region          31..137
                     /region_name="CH_UTRN_rpt1"
                     /note="first calponin homology (CH) domain found in
                     utrophin and similar proteins; cd21232"
                     /db_xref="CDD:409081"
     Site            order(33,35..36,39..40,43,46..47,128,135..136)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409081"
     Site            order(33,37,88,90..91,94..95,97,106..114,119,121..122,
                     124..125,128..129,132)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409081"
     Region          152..255
                     /region_name="CH_UTRN_rpt2"
                     /note="second calponin homology (CH) domain found in
                     utrophin and similar proteins; cd21234"
                     /db_xref="CDD:409083"
     Site            order(152,156,206,208..209,212..213,215,224..232,239,
                     241..242,244..245,248..249,252)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409083"
     Site            order(155..156,158..159,162,223,225..227,229,232,239,
                     241..242,245,248..249,251..252)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:409083"
     Region          311..501
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            order(419..421,424..426)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     CDS             1..502
                     /gene="LOC121354809"
                     /coded_by="XM_041469725.1:358..1866"
                     /db_xref="GeneID:121354809"
ORIGIN      
        1 marvseqeeg pggghsefsd iiksrsdehn dvqkktftkw inarfsksgk apvkdmftdl
       61 kdgrklldll egltgkplpk ergstrvhal nnvnrvlqvl hqnnvelvni ggtdivdgnh
      121 kltlgllwsi ilhwqvkdvm knimsdlqqt nsekillswv rqstrpysqv nvlnfttswa
      181 dglafnavih rhkpelfswd kvtkmspver lenafniakn hlgieklldp edvavqlpdk
      241 ksiimyltsl fevlpkqvtm edirevetlp rrykqecedg efsvqqtvsl eenqdssrae
      301 tpstvtevdm dldsyqvale evltwllsae dafreqeeis gdveevkeqf sthegfmmel
      361 tahqssvgnv lqagnqlvaq gnlspeeefe iqeqmlllns rweelrvesm drqsrlhdml
      421 melqkqqlqq lsdwltvtee riqkmesqll aedleslqkq leehkslqsd leaeqvkvns
      481 lthmvvivde ssgesatail ay
//
LOCUS       XP_041325660            2366 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 1B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325660
VERSION     XP_041325660.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469726.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2366
                     /product="AT-rich interactive domain-containing protein 1B
                     isoform X1"
                     /calculated_mol_wt=250340
     Region          <753..989
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1186..1278
                     /region_name="ARID_ARID1B"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 1B (ARID1B) and
                     similar proteins; cd16877"
                     /db_xref="CDD:350641"
     Site            order(1208..1214,1239,1241..1242,1245,1255,1257..1259,
                     1261)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350641"
     Region          1299..>1664
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          2057..2312
                     /region_name="BAF250_C"
                     /note="SWI/SNF-like complex subunit BAF250/Osa; pfam12031"
                     /db_xref="CDD:463439"
     CDS             1..2366
                     /gene="ARID1B"
                     /coded_by="XM_041469726.1:126..7226"
                     /db_xref="GeneID:121354810"
ORIGIN      
        1 mimaaqvaaa pasannskgk apslpvglgp ergpggagap gpgpalgvge gspaggnsvn
       61 nldhhlhhhh rseppnmann aapaaaagnn nnnasggggg sssepalkeg gssselssss
      121 ssssssssss snpgsametg llpnhklksv ggdhpaapph hhhahhphhh ahhhhahhph
      181 hhhhalqqql nqfpppppqq pppqhhpvqn nnsslggggg gsgsnnnggg gggaaqpsad
      241 meqqqhggkd svlgaqaepp qqpqqmlnkg adeeempgkm gepiggrydh pglgplggqq
      301 qpqqpppsag sgggglgggg gsggggggps avgvsefnsy ygnpapapas satasragpc
      361 fdqhggqqsp gmgimhptaa pnsmdplqns hegypnsqyn hypgygrgpx xavaaaaaaa
      421 agaggggygg saagygvlss prqpgggmmm gpgggaglgk agagaaaaag gfarfsgqnq
      481 hpsgatptln qlltspspmm rsygssypdy sspsappqpq pqaaaaapgs qqaaagmgmg
      541 kdmgaqygaa npawaaaqqr nhpamspgnt gqaisrtqgs pmdpmvmkrp qlygmgnnph
      601 sqaqqsspya gqsygppgpq rypvgmqgra paamggmqyp qqqippqygq qgvsgycqqg
      661 qqpyynqqpq pqhlppqaqy lsqaqqryqa qqdmsqegyg trsqppmapg kpnhedlnli
      721 qqerpsslpv evlasedatf ghkdlsgsid dlptgteatl ssavsasgst ssqgeqsnpa
      781 qspfsphasp hlsgipggps pspvgspvgs nqsrsgpisp asipgsqmpp qppgsqsess
      841 shpalsqspm pqdrgfmagi qrnpqmsqyg pqqtgpsmsp hpspggqvhp gigsfqqsns
      901 sgtygpqmsq ygpqgnysrp ptysgvpnts ysgpgpgmgi nansqmhgqg psqpcgsmpl
      961 grmpsagmqs rpfpgnmssm tpnspgmsqq ggpgmgppmp tvnrkaqeaa aavmqaaans
     1021 aqsrqgnfpa mnqsgimgss spytqpmnns sglmnpqapp ysmapnmvns stgnapmgla
     1081 dmmtpgeskl plplkadgke egapqpesks kdsyssqgis qpptpgnlpv pspmspssas
     1141 issfhgdesd sisspgwpkt psspksssst ttgekitkvy elgneperkm wvdryltfme
     1201 ergtpvaslp avgkkpldlf rlyvcvkeig glaqvnknkk wrelattlnv gtsssaassl
     1261 kkqyiqylfa feckiergee pppevfstgd tkkqpkiqpp spansgslqg pqtpqstgsn
     1321 smtevpgdlk pptpastphg qmtpmqggrn savsvhdpfs dvsdsafpkr nsmtpnapyq
     1381 qginmpdmmg rmpyepnkdp fggmrkvpgs nepfmtpgqm pnsgiqdmyn qspsgamsnm
     1441 smsqrqqfsy gsgydrrhep ygqqypgqgp psgqppyggh qpgmypqqqn ykrhmdgmyg
     1501 ppakrhegdm ynmqygnqqq emynqygnay tgpdrrpmqg qypypynrer mqgpgqmqqh
     1561 gippqmiggp mqsssssegp qqnmwptrnd mpypyqnrqg pggpaqappy pgmnrtddmm
     1621 vpdqrinhes qwpshvnqrq psymsssasm qpitrppqss yqtppsmpnh israpspasf
     1681 qrslenrmsp skspflpsmk mqkviptvpv sqvtgpppqp ppirreitfp pgsveasqpv
     1741 lkprrkitsk divtpeawrv mmslksglla estwaldtin illyddstva tfnlsqlsgf
     1801 lellveyfrk clidifgilm eyevgdpghk aldhkaakkd dsqslaedtg kdendecidy
     1861 fdedeeeged ekvegeeksi vfstpgaiad pserpkqask fdklpikivk knnlfvvdrs
     1921 dklgrvqefd sgllhwqlgg gdttehiqth feskmeippr rkappplnsp skkkdlegkg
     1981 eseeqqeksi tatiddvlsa rpgalpedsn sgsqtesskf pfgihqaksh rniklledep
     2041 rsrdetplct ithwqdslak rcicvsnivr slsfvpgndt emskhpglvl ilgklillhh
     2101 ehperkrapq tyekeeeedk gvacskdeww wdclevlrdn tlvtlanisg qldlsaytes
     2161 iclpildgll hwmvcpsaea qdpfptvgpn svlspqrlvl etlcklsiqd nnvdlilatp
     2221 pfsrqeklya tlvryvgdrk npvcremsma llsnlaqgdt laaraiavqk gsignlisfl
     2281 edgvtmaqyq qsqhnlmhmq pppleppsvd mmcraakall amarvdenrs efllhegrll
     2341 disisavlns lvasvicdvl fqigql
//
LOCUS       XP_041325661            2352 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 1B isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325661
VERSION     XP_041325661.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469727.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2352
                     /product="AT-rich interactive domain-containing protein 1B
                     isoform X2"
                     /calculated_mol_wt=248856
     Region          <721..975
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1172..1264
                     /region_name="ARID_ARID1B"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 1B (ARID1B) and
                     similar proteins; cd16877"
                     /db_xref="CDD:350641"
     Site            order(1194..1200,1225,1227..1228,1231,1241,1243..1245,
                     1247)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350641"
     Region          1285..>1650
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          2043..2298
                     /region_name="BAF250_C"
                     /note="SWI/SNF-like complex subunit BAF250/Osa; pfam12031"
                     /db_xref="CDD:463439"
     CDS             1..2352
                     /gene="ARID1B"
                     /coded_by="XM_041469727.1:126..7184"
                     /db_xref="GeneID:121354810"
ORIGIN      
        1 mimaaqvaaa pasannskgk apslpvglgp ergpggagap gpgpalgvge gspaggnsvn
       61 nldhhlhhhh rseppnmann aapaaaagnn nnnasggggg sssepalkeg gssselssss
      121 ssssssssss snpgsametg llpnhklksv ggdhpaapph hhhahhphhh ahhhhahhph
      181 hhhhalqqql nqfpppppqq pppqhhpvqn nnsslggggg gsgsnnnggg gggaaqpsad
      241 meqqqhggkd svlgaqaepp qqpqqmlnkg adeeempgkm gepiggrydh pglgplggqq
      301 qpqqpppsag sgggglgggg gsggggggps avgvsefnsy ygnpapapas satasragpc
      361 fdqhggqqsp gmgimhptaa pnsmdplqns hegypnsqyn hypgygrgpx xavaaaaaaa
      421 agaggggygg saagygvlss prqpgggmmm gpgggaglgk agagaaaaag gfarfsgqnq
      481 hpsgatptln qlltspspmm rsygssypdy sspsappqpq pqaaaaapgs qqaaagmgmg
      541 kdmgaqygaa npawaaaqqr nhpamspgnt gqaisrtqgs pmdpmvmkrp qlygmgnnph
      601 sqaqqsspya gqsygppgpq rypvgmqgra paamggmqyp qqqippqygq qgvsgycqqg
      661 qqpyynqqpq pqhlppqaqy lsqaqqryqa qqdmsqegyg trsqppmapg kpnhedlnli
      721 qqerpsslpd lsgsiddlpt gteatlssav sasgstssqg eqsnpaqspf sphasphlsg
      781 ipggpspspv gspvgsnqsr sgpispasip gsqmppqppg sqsessshpa lsqspmpqdr
      841 gfmagiqrnp qmsqygpqqt gpsmsphpsp ggqvhpgigs fqqsnssgty gpqmsqygpq
      901 gnysrpptys gvpntsysgp gpgmginans qmhgqgpsqp cgsmplgrmp sagmqsrpfp
      961 gnmssmtpns pgmsqqggpg mgppmptvnr kaqeaaaavm qaaansaqsr qgnfpamnqs
     1021 gimgssspyt qpmnnssglm npqappysma pnmvnsstgn apmgladmmt pgesklplpl
     1081 kadgkeegap qpeskskdsy ssqgisqppt pgnlpvpspm spssasissf hgdesdsiss
     1141 pgwpktpssp ksssstttge kitkvyelgn eperkmwvdr yltfmeergt pvaslpavgk
     1201 kpldlfrlyv cvkeigglaq vnknkkwrel attlnvgtss saasslkkqy iqylfafeck
     1261 iergeepppe vfstgdtkkq pkiqppspan sgslqgpqtp qstgsnsmte vpgdlkpptp
     1321 astphgqmtp mqggrnsavs vhdpfsdvsd safpkrnsmt pnapyqqgin mpdmmgrmpy
     1381 epnkdpfggm rkvpgsnepf mtpgqmpnsg iqdmynqsps gamsnmsmsq rqqfsygsgy
     1441 drrhepygqq ypgqgppsgq ppygghqpgm ypqqqnykrh mdgmygppak rhegdmynmq
     1501 ygnqqqemyn qygnaytgpd rrpmqgqypy pynrermqgp gqmqqhgipp qmiggpmqss
     1561 sssegpqqnm wptrndmpyp yqnrqgpggp aqappypgmn rtddmmvpdq rinhesqwps
     1621 hvnqrqpsym sssasmqpit rppqssyqtp psmpnhisra pspasfqrsl enrmspsksp
     1681 flpsmkmqkv iptvpvsqvt gpppqpppir reitfppgsv easqpvlkpr rkitskdivt
     1741 peawrvmmsl ksgllaestw aldtinilly ddstvatfnl sqlsgflell veyfrkclid
     1801 ifgilmeyev gdpghkaldh kaakkddsqs laedtgkden decidyfded eeegedekve
     1861 geeksivfst pgaiadpser pkqaskfdkl pikivkknnl fvvdrsdklg rvqefdsgll
     1921 hwqlgggdtt ehiqthfesk meipprrkap pplnspskkk dlegkgesee qqeksitati
     1981 ddvlsarpga lpedsnsgsq tesskfpfgi hqakshrnik lledeprsrd etplctithw
     2041 qdslakrcic vsnivrslsf vpgndtemsk hpglvlilgk lillhhehpe rkrapqtyek
     2101 eeeedkgvac skdewwwdcl evlrdntlvt lanisgqldl saytesiclp ildgllhwmv
     2161 cpsaeaqdpf ptvgpnsvls pqrlvletlc klsiqdnnvd lilatppfsr qeklyatlvr
     2221 yvgdrknpvc remsmallsn laqgdtlaar aiavqkgsig nlisfledgv tmaqyqqsqh
     2281 nlmhmqpppl eppsvdmmcr aakallamar vdenrsefll hegrlldisi savlnslvas
     2341 vicdvlfqig ql
//
LOCUS       XP_041325662            2350 aa            linear   VRT 06-MAY-2021
DEFINITION  AT-rich interactive domain-containing protein 1B isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325662
VERSION     XP_041325662.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469728.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2350
                     /product="AT-rich interactive domain-containing protein 1B
                     isoform X3"
                     /calculated_mol_wt=248685
     Region          <721..975
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1170..1262
                     /region_name="ARID_ARID1B"
                     /note="ARID/BRIGHT DNA binding domain of AT-rich
                     interactive domain-containing protein 1B (ARID1B) and
                     similar proteins; cd16877"
                     /db_xref="CDD:350641"
     Site            order(1192..1198,1223,1225..1226,1229,1239,1241..1243,
                     1245)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350641"
     Region          1283..>1648
                     /region_name="Med15"
                     /note="ARC105 or Med15 subunit of Mediator complex
                     non-fungal; pfam09606"
                     /db_xref="CDD:312941"
     Region          2041..2296
                     /region_name="BAF250_C"
                     /note="SWI/SNF-like complex subunit BAF250/Osa; pfam12031"
                     /db_xref="CDD:463439"
     CDS             1..2350
                     /gene="ARID1B"
                     /coded_by="XM_041469728.1:126..7178"
                     /db_xref="GeneID:121354810"
ORIGIN      
        1 mimaaqvaaa pasannskgk apslpvglgp ergpggagap gpgpalgvge gspaggnsvn
       61 nldhhlhhhh rseppnmann aapaaaagnn nnnasggggg sssepalkeg gssselssss
      121 ssssssssss snpgsametg llpnhklksv ggdhpaapph hhhahhphhh ahhhhahhph
      181 hhhhalqqql nqfpppppqq pppqhhpvqn nnsslggggg gsgsnnnggg gggaaqpsad
      241 meqqqhggkd svlgaqaepp qqpqqmlnkg adeeempgkm gepiggrydh pglgplggqq
      301 qpqqpppsag sgggglgggg gsggggggps avgvsefnsy ygnpapapas satasragpc
      361 fdqhggqqsp gmgimhptaa pnsmdplqns hegypnsqyn hypgygrgpx xavaaaaaaa
      421 agaggggygg saagygvlss prqpgggmmm gpgggaglgk agagaaaaag gfarfsgqnq
      481 hpsgatptln qlltspspmm rsygssypdy sspsappqpq pqaaaaapgs qqaaagmgmg
      541 kdmgaqygaa npawaaaqqr nhpamspgnt gqaisrtqgs pmdpmvmkrp qlygmgnnph
      601 sqaqqsspya gqsygppgpq rypvgmqgra paamggmqyp qqqippqygq qgvsgycqqg
      661 qqpyynqqpq pqhlppqaqy lsqaqqryqa qqdmsqegyg trsqppmapg kpnhedlnli
      721 qqerpsslpd lsgsiddlpt gteatlssav sasgstssqg eqsnpaqspf sphasphlsg
      781 ipggpspspv gspvgsnqsr sgpispasip gsqmppqppg sqsessshpa lsqspmpqdr
      841 gfmagiqrnp qmsqygpqqt gpsmsphpsp ggqvhpgigs fqqsnssgty gpqmsqygpq
      901 gnysrpptys gvpntsysgp gpgmginans qmhgqgpsqp cgsmplgrmp sagmqsrpfp
      961 gnmssmtpns pgmsqqggpg mgppmptvnr kaqeaaaavm qaaansaqsr qgnfpamnqs
     1021 gimgssspyt qpmnnssglm npqappysma pnmvnsstap mgladmmtpg esklplplka
     1081 dgkeegapqp eskskdsyss qgisqpptpg nlpvpspmsp ssasissfhg desdsisspg
     1141 wpktpsspks ssstttgeki tkvyelgnep erkmwvdryl tfmeergtpv aslpavgkkp
     1201 ldlfrlyvcv keigglaqvn knkkwrelat tlnvgtsssa asslkkqyiq ylfafeckie
     1261 rgeepppevf stgdtkkqpk iqppspansg slqgpqtpqs tgsnsmtevp gdlkpptpas
     1321 tphgqmtpmq ggrnsavsvh dpfsdvsdsa fpkrnsmtpn apyqqginmp dmmgrmpyep
     1381 nkdpfggmrk vpgsnepfmt pgqmpnsgiq dmynqspsga msnmsmsqrq qfsygsgydr
     1441 rhepygqqyp gqgppsgqpp ygghqpgmyp qqqnykrhmd gmygppakrh egdmynmqyg
     1501 nqqqemynqy gnaytgpdrr pmqgqypypy nrermqgpgq mqqhgippqm iggpmqssss
     1561 segpqqnmwp trndmpypyq nrqgpggpaq appypgmnrt ddmmvpdqri nhesqwpshv
     1621 nqrqpsymss sasmqpitrp pqssyqtpps mpnhisraps pasfqrslen rmspskspfl
     1681 psmkmqkvip tvpvsqvtgp ppqpppirre itfppgsvea sqpvlkprrk itskdivtpe
     1741 awrvmmslks gllaestwal dtinillydd stvatfnlsq lsgflellve yfrkclidif
     1801 gilmeyevgd pghkaldhka akkddsqsla edtgkdende cidyfdedee egedekvege
     1861 eksivfstpg aiadpserpk qaskfdklpi kivkknnlfv vdrsdklgrv qefdsgllhw
     1921 qlgggdtteh iqthfeskme ipprrkappp lnspskkkdl egkgeseeqq eksitatidd
     1981 vlsarpgalp edsnsgsqte sskfpfgihq akshrnikll edeprsrdet plctithwqd
     2041 slakrcicvs nivrslsfvp gndtemskhp glvlilgkli llhhehperk rapqtyekee
     2101 eedkgvacsk dewwwdclev lrdntlvtla nisgqldlsa ytesiclpil dgllhwmvcp
     2161 saeaqdpfpt vgpnsvlspq rlvletlckl siqdnnvdli latppfsrqe klyatlvryv
     2221 gdrknpvcre msmallsnla qgdtlaarai avqkgsignl isfledgvtm aqyqqsqhnl
     2281 mhmqppplep psvdmmcraa kallamarvd enrsefllhe grlldisisa vlnslvasvi
     2341 cdvlfqigql
//
LOCUS       XP_041325663             396 aa            linear   VRT 06-MAY-2021
DEFINITION  pre-mRNA-splicing regulator WTAP [Pyrgilauda ruficollis].
ACCESSION   XP_041325663
VERSION     XP_041325663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..396
                     /product="pre-mRNA-splicing regulator WTAP"
                     /calculated_mol_wt=44187
     Region          68..222
                     /region_name="Wtap"
                     /note="WTAP/Mum2p family; pfam17098"
                     /db_xref="CDD:465345"
     CDS             1..396
                     /gene="LOC121354812"
                     /coded_by="XM_041469729.1:148..1338"
                     /db_xref="GeneID:121354812"
ORIGIN      
        1 mtneeplpkk vrlseadfkv lprdelilrw kqyeayvqal egkytdlnsn dvtglresee
       61 klkqqqqesa rrenilvmrl atkeqemqec tnqiqylkqv qqpsvaqlrs tmvdpainlf
      121 flkmkgeleq tkdkleqaqn elsawkftpd sqtgkklmak crmliqenqe lgrqlsqgri
      181 aqleaelalq kkyseelkss qdelndfiiq ldeevegmqs tilvlqqqlk etrqqlaqyq
      241 qqqsqasnpg tsrtpssepa eqgeaagkdc srlangpsng ssshqrtsgp gfyregsgte
      301 ddfpaspgng nklsnhsedr tgrgsgsyin qlstgyesvd sptgsenslt hhsndtdsnh
      361 dpqeektvsm kgnrtvgsrh vqngldssvn vqgsvl
//
LOCUS       XP_041325664             567 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatase and actin regulator 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325664
VERSION     XP_041325664.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469730.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="phosphatase and actin regulator 2"
                     /calculated_mol_wt=61376
     Region          72..93
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          410..435
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          449..473
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          486..511
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     CDS             1..567
                     /gene="PHACTR2"
                     /coded_by="XM_041469730.1:96..1799"
                     /db_xref="GeneID:121354813"
ORIGIN      
        1 mgqtsvstlp epagvdgldk asiansdgpa pgsqtppfkr kgklsnigki fkpwkwrkkk
       61 tsdkfretsa vlerkistrq sreelirrgv lkempeqdgd vtvnfetsng htvaigeeti
      121 qeenvvkasg nngtlsekas egkkedqkag sshakklpvs ksssspspss tsshpkaske
      181 tssksgtsgt prgkkkpgkq saprtapdga asspsgatad sleakaekpk peqtsivvfe
      241 tenadqsskl vvpppptaap pppplpppfp aaasqpagss daqdasdscv agprspgsdt
      301 kplvptergt eqslssaalg sapdaggeda eslatkedqe geapdeafse lveeasdaaa
      361 ppesessres hgsdsdsdgp ilytdddddd dddenastes slaskirrrd tlaiklgnrp
      421 skkeledkni lqrtseeerq eirhqigtkl vrrlsqrptt eeleqrnilk qkneeeeqea
      481 kreikrrlsr klslrptvae lqarrilrfn eyvevtespd ydrradkpwa rltpadkaai
      541 rkelnefkst emevheesrq ftrfhrp
//
LOCUS       XP_041325666             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325666
VERSION     XP_041325666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469732.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469732.1:236..2998"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325667             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325667
VERSION     XP_041325667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469733.1:363..3125"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325668             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325668
VERSION     XP_041325668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469734.1:367..3129"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325669             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325669
VERSION     XP_041325669.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469735.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469735.1:373..3135"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325670             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325670
VERSION     XP_041325670.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469736.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469736.1:512..3274"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325671             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325671
VERSION     XP_041325671.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469737.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469737.1:445..3207"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325672             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325672
VERSION     XP_041325672.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469738.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469738.1:598..3360"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325673             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325673
VERSION     XP_041325673.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469739.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469739.1:357..3119"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325674             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325674
VERSION     XP_041325674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469740.1:199..2961"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325675             920 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325675
VERSION     XP_041325675.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469741.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..920
                     /product="bcl-2-associated transcription factor 1 isoform
                     X1"
                     /calculated_mol_wt=106131
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <828..>893
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..920
                     /gene="BCLAF1"
                     /coded_by="XM_041469741.1:230..2992"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf frirgrgrar gvfagtntgp snsnttfqkr pkeeewdpey
      841 tpkskkyflh ddrddgvdyw akrgrgrgtf qrgrgrfnfk ksgsspkwth dkyqgdgive
      901 deeetienne ekdrrkeeke
//
LOCUS       XP_041325676             887 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325676
VERSION     XP_041325676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..887
                     /product="bcl-2-associated transcription factor 1 isoform
                     X2"
                     /calculated_mol_wt=102341
     Region          122..715
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <795..>860
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..887
                     /gene="BCLAF1"
                     /coded_by="XM_041469742.1:236..2899"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrsks
      121 pvsskrrasl ekqakktega plqdspmknk sqdeqkdtfe hdpseslddf nkssaasgdi
      181 wpglsaydns prsphspsia tppsqssscs dapllstahs akdtpqhshs iqhspersgs
      241 gslgngssry spsqnsplhh ipsrrspakt ipsqsapree arvrsfypeg geqetakggk
      301 fmkrytdees rvylldrgnt rekeaqkerg sekgrteger eweeqetldf fvdketgkek
      361 fndsegedte etedyrqfrk svladqgknf pttshrnaee egtkykskis ikgnresdgf
      421 rdeksyklke tgyvverpsa tkdkhkeedk nserlmmkke tqspeqvkse klkelfdysp
      481 plhknldare kstfreespl rikmiasdsh rpevklkmap vplddsnrpa sltkdrllas
      541 tlvhsvkkeq efrsifdhik lpqaskstse sfiqhivslv hhvkeqyfks agmtlnerft
      601 ayqkateehc trqkspeihr ridispstlr khtrltgeer vfkeesqkgd kklrcdsadl
      661 rhdidrrrke rskergdskg sressgsrkq ekapkdykdy ksykddskqk rdqdrarssp
      721 ssspssssss sreekdckke rdeefkthhe qkeysgfagv nrprgtffri rgrgrargvf
      781 agtntgpsns nttfqkrpke eewdpeytpk skkyflhddr ddgvdywakr grgrgtfqrg
      841 rgrfnfkksg sspkwthdky qgdgivedee etienneekd rrkeeke
//
LOCUS       XP_041325677             871 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325677
VERSION     XP_041325677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..871
                     /product="bcl-2-associated transcription factor 1 isoform
                     X3"
                     /calculated_mol_wt=100441
     Region          158..748
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     CDS             1..871
                     /gene="BCLAF1"
                     /coded_by="XM_041469743.1:236..2851"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kqkrdqdrar sspssspsss ssssreekdc kkerdeefkt
      781 hheqkeysgf agvnrprgtf hddrddgvdy wakrgrgrgt fqrgrgrfnf kksgsspkwt
      841 hdkyqgdgiv edeeetienn eekdrrkeek e
//
LOCUS       XP_041325678             753 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325678
VERSION     XP_041325678.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469744.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..753
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..753
                     /product="bcl-2-associated transcription factor 1 isoform
                     X4"
                     /calculated_mol_wt=86576
     Region          158..741
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     CDS             1..753
                     /gene="BCLAF1"
                     /coded_by="XM_041469744.1:236..2497"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmkrytd eesrvylldr gntrekeaqk
      361 ergsekgrte gereweeqet ldffvdketg kekfndsege dteetedyrq frksvladqg
      421 knfpttshrn aeeegtkyks kisikgnres dgfrdeksyk lketgyvver psatkdkhke
      481 edknserlmm kketqspeqv kseklkelfd yspplhknld arekstfree splrikmias
      541 dshrpevklk mapvplddsn rpasltkdrl lastlvhsvk keqefrsifd hiklpqasks
      601 tsesfiqhiv slvhhvkeqy fksagmtlne rftayqkate ehctrqkspe ihrridisps
      661 tlrkhtrltg eervfkeesq kgdkklrcds adlrhdidrr rkerskergd skgsressgs
      721 rkqekapkdy kdyksykdds kyvlsvfyta ygg
//
LOCUS       XP_041325680             745 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325680
VERSION     XP_041325680.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469746.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..745
                     /product="bcl-2-associated transcription factor 1 isoform
                     X5"
                     /calculated_mol_wt=85386
     Region          <329..573
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     Region          <653..>718
                     /region_name="Btz"
                     /note="CASC3/Barentsz eIF4AIII binding; cl09653"
                     /db_xref="CDD:447763"
     CDS             1..745
                     /gene="BCLAF1"
                     /coded_by="XM_041469746.1:236..2473"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmksppl hknldareks tfreesplri
      361 kmiasdshrp evklkmapvp lddsnrpasl tkdrllastl vhsvkkeqef rsifdhiklp
      421 qaskstsesf iqhivslvhh vkeqyfksag mtlnerftay qkateehctr qkspeihrri
      481 dispstlrkh trltgeervf keesqkgdkk lrcdsadlrh didrrrkers kergdskgsr
      541 essgsrkqek apkdykdyks ykddskqkrd qdrarsspss spsssssssr eekdckkerd
      601 eefkthheqk eysgfagvnr prgtffrirg rgrargvfag tntgpsnsnt tfqkrpkeee
      661 wdpeytpksk kyflhddrdd gvdywakrgr grgtfqrgrg rfnfkksgss pkwthdkyqg
      721 dgivedeeet ienneekdrr keeke
//
LOCUS       XP_041325681             696 aa            linear   VRT 06-MAY-2021
DEFINITION  bcl-2-associated transcription factor 1 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325681
VERSION     XP_041325681.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469747.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..696
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..696
                     /product="bcl-2-associated transcription factor 1 isoform
                     X6"
                     /calculated_mol_wt=79697
     Region          <329..573
                     /region_name="THRAP3_BCLAF1"
                     /note="THRAP3/BCLAF1 family; pfam15440"
                     /db_xref="CDD:464718"
     CDS             1..696
                     /gene="BCLAF1"
                     /coded_by="XM_041469747.1:236..2326"
                     /db_xref="GeneID:121354814"
ORIGIN      
        1 mgrsnsrshs srsksrsqss srsrsrshsr kkryssrsrs rtysrsrsrd rvysrdyrrd
       61 yrnnrgmrrp ygyrgrgrgy yqggggryhr ggyrpvwnrr hsrsprrgrs rsrspkrrsv
      121 ssqrsrsrsr rsyrssrspr ssssrssspy skspvsskrr aslekqakkt egaplqdspm
      181 knksqdeqkd tfehdpsesl ddfnkssaas gdiwpglsay dnsprsphsp siatppsqss
      241 scsdapllst ahsakdtpqh shsiqhsper sgsgslgngs sryspsqnsp lhhipsrrsp
      301 aktipsqsap reearvrsfy peggeqetak ggkfmksppl hknldareks tfreesplri
      361 kmiasdshrp evklkmapvp lddsnrpasl tkdrllastl vhsvkkeqef rsifdhiklp
      421 qaskstsesf iqhivslvhh vkeqyfksag mtlnerftay qkateehctr qkspeihrri
      481 dispstlrkh trltgeervf keesqkgdkk lrcdsadlrh didrrrkers kergdskgsr
      541 essgsrkqek apkdykdyks ykddskqkrd qdrarsspss spsssssssr eekdckkerd
      601 eefkthheqk eysgfagvnr prgtfhddrd dgvdywakrg rgrgtfqrgr grfnfkksgs
      661 spkwthdkyq gdgivedeee tienneekdr rkeeke
//
LOCUS       XP_041325682            2468 aa            linear   VRT 06-MAY-2021
DEFINITION  cation-independent mannose-6-phosphate receptor isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325682
VERSION     XP_041325682.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469748.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2468
                     /product="cation-independent mannose-6-phosphate receptor
                     isoform X1"
                     /calculated_mol_wt=274879
     Region          108..243
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          263..408
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          411..562
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          571..705
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          710..862
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1012..1158
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1221..>1344
                     /region_name="ATG27"
                     /note="Autophagy-related protein 27; cl39051"
                     /db_xref="CDD:476860"
     Region          1301..1440
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1593..1711
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1738..1871
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1880..1919
                     /region_name="fn2"
                     /note="Fibronectin type II domain; pfam00040"
                     /db_xref="CDD:459645"
     Site            order(1884,1886,1891,1903,1910,1916,1918)
                     /site_type="active"
                     /note="putative gelatin-binding site [active]"
                     /db_xref="CDD:238019"
     Region          1926..2059
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          2063..>2176
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          2217..>2258
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     CDS             1..2468
                     /gene="IGF2R"
                     /coded_by="XM_041469748.1:55..7461"
                     /db_xref="GeneID:121354816"
ORIGIN      
        1 malmaalllg allallppag aaaaalpepy qdlcsytwea idadkkvlyk infcsgveec
       61 gtasavcayd iktnthlsvg dlalqkvses llefnttrnc lqqgsehqiq sninflcgkt
      121 lgtpefvtat ecvhyfewrt fvackkdlfk pakevpcyaf dedlkkhdln pliqvsghyl
      181 vddsdddslf invcrdigss sgetrkcpag saacllrdgl aydvgrpkeq lklqdkdrlv
      241 lsyerqykhd eerpsfclgh npavtitfvc pskrgeesag pkltaktncr yeiewvteya
      301 chrdyleskt ciltneqhdi sidlsplnqf seyvtpysak ddkeeyyyyl nvcgkttagn
      361 ckddtgyiss cqvklsnnqq kvagrfanqt lrysdgdltl iypngdacss gfqrmtvinf
      421 ecnetagndg rgnpvftgev dctyfftwdt kyacvkekkd llcrvtdkrk hydlsplvrs
      481 sesaqnweav dssfsevgrk hyyinvchkv lkrggafscs dgaavcsvdk qnnsknlgtf
      541 vsspkkvgen iqltysngds cpskekekmq tvitlicrpg dlesapilma erecsyafew
      601 ytaaacvlsk tegddcqvsd pqagfsfdls plakaksfyt ittkeyffyi svcgslpddr
      661 chtksaacqv arsddqswsl glpssklsyy dgliqltykn gaaynnenkt qrstlitflc
      721 dhdagigqpe yqkednytyn frwytehacp eiplecvvtd rntmdqydls rlaksekrge
      781 nwyamdnsrp serkkyyinv crpliavpgc drrasvcqme ynhvstsyse vtsisnlgva
      841 skelvierpg hvsltyangs vcinadgktt tytttihfvc srgtlssspr fvaildcvat
      901 flweteaacp iketkddsqs csardpntgf vfnlqplase egytvtgngk tfslnicghl
      961 pycgkingkt aagcerenlt plrpleldkt lylssegflt ltyrgplrve sgtsdmfrvt
     1021 ficndsypge lkfvreeins vldvhdtffe fhtalacapa pvdcqvtdaa gneydlsdls
     1081 kdgepwvaid tskeakkrtf flnvckplpy vtgcpggaig scvkytdksk nlgviqinpq
     1141 aatdgslsii ylngdtckdn qrystriifq cdqttgspvl eqendcefvf vwrtlaacpv
     1201 hkaegkdcqv kdpryghvfn lkplsgknik vstdeydyyf svcgeitehc rtkghgvasc
     1261 qvkkmdptfe kvaglrtdkl tfknglimin ytsgekchki yerstailfy cdktssepvf
     1321 lketpdctym fewhtqyacp pvkstecsyk ddegnfydfs sltrhrenwe aiaisattqk
     1381 yyinvcrplv pysatrscps daaaslvegt kctslgevad gprwenvtfi lkyingdqcp
     1441 dktrkkttil rlkcdenrie skpelitaie dceytflwft aaacplksnv qndcrvtnps
     1501 tghlfdltsl kresgytisd shnriielnv caevksscan gaavcitsgr kpvnagkqsk
     1561 tlsyedqvlk lvyedgdpcp adpalkhksy fsfvcksdag desrpvfvsf deqtctsyfs
     1621 whtslaceee vkcsvmndss iidlsplihr tgyyeafvde ditdvspdfy iniceplnpi
     1681 kdvncppgaa vcmvpvnesp idigrvtepp qfnkavnevy itynsttpcq innglnytsv
     1741 iafhcgqgts lgkpkmirki dctfvfewet plvcpdkvkt lgcsvideql hytfnlssls
     1801 grsfevfsgs nnyhigvcsv glpqgkcrdg avcltsksgv ssfgnikemr ldyshqdetv
     1861 ilqytggdrc ppvtekgelc vfpfkykgkt ykecitegkn kpwcatteny qgdekwgfcs
     1921 sttarresti iftcdenagv gspyllsetl gcavtfewkt qavcppkkme ckfvqkhrty
     1981 dlrmlssltg swiffhngns yyvnlcqrvh egptgcpera sicrksyngd vqvlglvhtq
     2041 klnvtgdtvy isyssgqecr knkkvttiie lkcartvgmp mlqrfdeenc ayyitwdtra
     2101 acavkqqeve vvngtvinpa tgknfslgdv ysklytasgd vrtngdkyvy qiqlsgitns
     2161 sspecfgani cqvktneqrv rrvgsarnak yyvddddldv ifssdsrcgk dkskfvssti
     2221 ffhcnpeeke gipeflheta dcqylftwyt savcplistn dpgnnqhqtd eetqihkgls
     2281 rrsqavgavl svllvvltac liillfykke rreivinkit nccrrssgvs ykytkinsee
     2341 eanenetewl meevaapnpr takggqengh iatksvtsea ltslhvddld sedevltipd
     2401 vkiqtgrgld kskhpqkkph sfgsdnksyl lnggketkai arpgqhqaqn stntasfhdd
     2461 sdedllni
//
LOCUS       XP_041325683            2448 aa            linear   VRT 06-MAY-2021
DEFINITION  cation-independent mannose-6-phosphate receptor isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325683
VERSION     XP_041325683.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469749.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2448
                     /product="cation-independent mannose-6-phosphate receptor
                     isoform X2"
                     /calculated_mol_wt=272972
     Region          88..223
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          243..388
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          391..542
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          551..685
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          690..842
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          992..1138
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1201..>1324
                     /region_name="ATG27"
                     /note="Autophagy-related protein 27; cl39051"
                     /db_xref="CDD:476860"
     Region          1281..1420
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1573..1691
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1718..1851
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1860..1899
                     /region_name="fn2"
                     /note="Fibronectin type II domain; pfam00040"
                     /db_xref="CDD:459645"
     Site            order(1864,1866,1871,1883,1890,1896,1898)
                     /site_type="active"
                     /note="putative gelatin-binding site [active]"
                     /db_xref="CDD:238019"
     Region          1906..2039
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          2043..>2156
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          2197..>2238
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     CDS             1..2448
                     /gene="IGF2R"
                     /coded_by="XM_041469749.1:16..7362"
                     /db_xref="GeneID:121354816"
ORIGIN      
        1 mqaaasarrg iaepsytwea idadkkvlyk infcsgveec gtasavcayd iktnthlsvg
       61 dlalqkvses llefnttrnc lqqgsehqiq sninflcgkt lgtpefvtat ecvhyfewrt
      121 fvackkdlfk pakevpcyaf dedlkkhdln pliqvsghyl vddsdddslf invcrdigss
      181 sgetrkcpag saacllrdgl aydvgrpkeq lklqdkdrlv lsyerqykhd eerpsfclgh
      241 npavtitfvc pskrgeesag pkltaktncr yeiewvteya chrdyleskt ciltneqhdi
      301 sidlsplnqf seyvtpysak ddkeeyyyyl nvcgkttagn ckddtgyiss cqvklsnnqq
      361 kvagrfanqt lrysdgdltl iypngdacss gfqrmtvinf ecnetagndg rgnpvftgev
      421 dctyfftwdt kyacvkekkd llcrvtdkrk hydlsplvrs sesaqnweav dssfsevgrk
      481 hyyinvchkv lkrggafscs dgaavcsvdk qnnsknlgtf vsspkkvgen iqltysngds
      541 cpskekekmq tvitlicrpg dlesapilma erecsyafew ytaaacvlsk tegddcqvsd
      601 pqagfsfdls plakaksfyt ittkeyffyi svcgslpddr chtksaacqv arsddqswsl
      661 glpssklsyy dgliqltykn gaaynnenkt qrstlitflc dhdagigqpe yqkednytyn
      721 frwytehacp eiplecvvtd rntmdqydls rlaksekrge nwyamdnsrp serkkyyinv
      781 crpliavpgc drrasvcqme ynhvstsyse vtsisnlgva skelvierpg hvsltyangs
      841 vcinadgktt tytttihfvc srgtlssspr fvaildcvat flweteaacp iketkddsqs
      901 csardpntgf vfnlqplase egytvtgngk tfslnicghl pycgkingkt aagcerenlt
      961 plrpleldkt lylssegflt ltyrgplrve sgtsdmfrvt ficndsypge lkfvreeins
     1021 vldvhdtffe fhtalacapa pvdcqvtdaa gneydlsdls kdgepwvaid tskeakkrtf
     1081 flnvckplpy vtgcpggaig scvkytdksk nlgviqinpq aatdgslsii ylngdtckdn
     1141 qrystriifq cdqttgspvl eqendcefvf vwrtlaacpv hkaegkdcqv kdpryghvfn
     1201 lkplsgknik vstdeydyyf svcgeitehc rtkghgvasc qvkkmdptfe kvaglrtdkl
     1261 tfknglimin ytsgekchki yerstailfy cdktssepvf lketpdctym fewhtqyacp
     1321 pvkstecsyk ddegnfydfs sltrhrenwe aiaisattqk yyinvcrplv pysatrscps
     1381 daaaslvegt kctslgevad gprwenvtfi lkyingdqcp dktrkkttil rlkcdenrie
     1441 skpelitaie dceytflwft aaacplksnv qndcrvtnps tghlfdltsl kresgytisd
     1501 shnriielnv caevksscan gaavcitsgr kpvnagkqsk tlsyedqvlk lvyedgdpcp
     1561 adpalkhksy fsfvcksdag desrpvfvsf deqtctsyfs whtslaceee vkcsvmndss
     1621 iidlsplihr tgyyeafvde ditdvspdfy iniceplnpi kdvncppgaa vcmvpvnesp
     1681 idigrvtepp qfnkavnevy itynsttpcq innglnytsv iafhcgqgts lgkpkmirki
     1741 dctfvfewet plvcpdkvkt lgcsvideql hytfnlssls grsfevfsgs nnyhigvcsv
     1801 glpqgkcrdg avcltsksgv ssfgnikemr ldyshqdetv ilqytggdrc ppvtekgelc
     1861 vfpfkykgkt ykecitegkn kpwcatteny qgdekwgfcs sttarresti iftcdenagv
     1921 gspyllsetl gcavtfewkt qavcppkkme ckfvqkhrty dlrmlssltg swiffhngns
     1981 yyvnlcqrvh egptgcpera sicrksyngd vqvlglvhtq klnvtgdtvy isyssgqecr
     2041 knkkvttiie lkcartvgmp mlqrfdeenc ayyitwdtra acavkqqeve vvngtvinpa
     2101 tgknfslgdv ysklytasgd vrtngdkyvy qiqlsgitns sspecfgani cqvktneqrv
     2161 rrvgsarnak yyvddddldv ifssdsrcgk dkskfvssti ffhcnpeeke gipeflheta
     2221 dcqylftwyt savcplistn dpgnnqhqtd eetqihkgls rrsqavgavl svllvvltac
     2281 liillfykke rreivinkit nccrrssgvs ykytkinsee eanenetewl meevaapnpr
     2341 takggqengh iatksvtsea ltslhvddld sedevltipd vkiqtgrgld kskhpqkkph
     2401 sfgsdnksyl lnggketkai arpgqhqaqn stntasfhdd sdedllni
//
LOCUS       XP_041325684            2454 aa            linear   VRT 06-MAY-2021
DEFINITION  cation-independent mannose-6-phosphate receptor isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325684
VERSION     XP_041325684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469750.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2454
                     /product="cation-independent mannose-6-phosphate receptor
                     isoform X3"
                     /calculated_mol_wt=273886
     Region          94..229
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          249..394
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          397..548
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          557..691
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          696..848
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          998..1144
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1207..>1330
                     /region_name="ATG27"
                     /note="Autophagy-related protein 27; cl39051"
                     /db_xref="CDD:476860"
     Region          1287..1426
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1579..1697
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1724..1857
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1866..1905
                     /region_name="fn2"
                     /note="Fibronectin type II domain; pfam00040"
                     /db_xref="CDD:459645"
     Site            order(1870,1872,1877,1889,1896,1902,1904)
                     /site_type="active"
                     /note="putative gelatin-binding site [active]"
                     /db_xref="CDD:238019"
     Region          1912..2045
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          2049..>2162
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          2203..>2244
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     CDS             1..2454
                     /gene="IGF2R"
                     /coded_by="XM_041469750.1:332..7696"
                     /db_xref="GeneID:121354816"
ORIGIN      
        1 msleswllak ditmchslty sytweaidad kkvlykinfc sgveecgtas avcaydiktn
       61 thlsvgdlal qkvsesllef nttrnclqqg sehqiqsnin flcgktlgtp efvtatecvh
      121 yfewrtfvac kkdlfkpake vpcyafdedl kkhdlnpliq vsghylvdds dddslfinvc
      181 rdigsssget rkcpagsaac llrdglaydv grpkeqlklq dkdrlvlsye rqykhdeerp
      241 sfclghnpav titfvcpskr geesagpklt aktncryeie wvteyachrd ylesktcilt
      301 neqhdisidl splnqfseyv tpysakddke eyyyylnvcg kttagnckdd tgyisscqvk
      361 lsnnqqkvag rfanqtlrys dgdltliypn gdacssgfqr mtvinfecne tagndgrgnp
      421 vftgevdcty fftwdtkyac vkekkdllcr vtdkrkhydl splvrssesa qnweavdssf
      481 sevgrkhyyi nvchkvlkrg gafscsdgaa vcsvdkqnns knlgtfvssp kkvgeniqlt
      541 ysngdscpsk ekekmqtvit licrpgdles apilmaerec syafewytaa acvlsktegd
      601 dcqvsdpqag fsfdlsplak aksfytittk eyffyisvcg slpddrchtk saacqvarsd
      661 dqswslglps sklsyydgli qltykngaay nnenktqrst litflcdhda gigqpeyqke
      721 dnytynfrwy tehacpeipl ecvvtdrntm dqydlsrlak sekrgenwya mdnsrpserk
      781 kyyinvcrpl iavpgcdrra svcqmeynhv stsysevtsi snlgvaskel vierpghvsl
      841 tyangsvcin adgktttytt tihfvcsrgt lsssprfvai ldcvatflwe teaacpiket
      901 kddsqscsar dpntgfvfnl qplaseegyt vtgngktfsl nicghlpycg kingktaagc
      961 erenltplrp leldktlyls segfltltyr gplrvesgts dmfrvtficn dsypgelkfv
     1021 reeinsvldv hdtffefhta lacapapvdc qvtdaagney dlsdlskdge pwvaidtske
     1081 akkrtfflnv ckplpyvtgc pggaigscvk ytdksknlgv iqinpqaatd gslsiiylng
     1141 dtckdnqrys triifqcdqt tgspvleqen dcefvfvwrt laacpvhkae gkdcqvkdpr
     1201 yghvfnlkpl sgknikvstd eydyyfsvcg eitehcrtkg hgvascqvkk mdptfekvag
     1261 lrtdkltfkn gliminytsg ekchkiyers tailfycdkt ssepvflket pdctymfewh
     1321 tqyacppvks tecsykddeg nfydfssltr hrenweaiai sattqkyyin vcrplvpysa
     1381 trscpsdaaa slvegtkcts lgevadgprw envtfilkyi ngdqcpdktr kkttilrlkc
     1441 denrieskpe litaiedcey tflwftaaac plksnvqndc rvtnpstghl fdltslkres
     1501 gytisdshnr iielnvcaev ksscangaav citsgrkpvn agkqsktlsy edqvlklvye
     1561 dgdpcpadpa lkhksyfsfv cksdagdesr pvfvsfdeqt ctsyfswhts laceeevkcs
     1621 vmndssiidl splihrtgyy eafvdeditd vspdfyinic eplnpikdvn cppgaavcmv
     1681 pvnespidig rvteppqfnk avnevyityn sttpcqinng lnytsviafh cgqgtslgkp
     1741 kmirkidctf vfewetplvc pdkvktlgcs videqlhytf nlsslsgrsf evfsgsnnyh
     1801 igvcsvglpq gkcrdgavcl tsksgvssfg nikemrldys hqdetvilqy tggdrcppvt
     1861 ekgelcvfpf kykgktykec itegknkpwc attenyqgde kwgfcsstta rrestiiftc
     1921 denagvgspy llsetlgcav tfewktqavc ppkkmeckfv qkhrtydlrm lssltgswif
     1981 fhngnsyyvn lcqrvhegpt gcperasicr ksyngdvqvl glvhtqklnv tgdtvyisys
     2041 sgqecrknkk vttiielkca rtvgmpmlqr fdeencayyi twdtraacav kqqevevvng
     2101 tvinpatgkn fslgdvyskl ytasgdvrtn gdkyvyqiql sgitnssspe cfganicqvk
     2161 tneqrvrrvg sarnakyyvd dddldvifss dsrcgkdksk fvsstiffhc npeekegipe
     2221 flhetadcqy lftwytsavc plistndpgn nqhqtdeetq ihkglsrrsq avgavlsvll
     2281 vvltacliil lfykkerrei vinkitnccr rssgvsykyt kinseeeane netewlmeev
     2341 aapnprtakg gqenghiatk svtsealtsl hvddldsede vltipdvkiq tgrgldkskh
     2401 pqkkphsfgs dnksyllngg ketkaiarpg qhqaqnstnt asfhddsded llni
//
LOCUS       XP_041325685            2377 aa            linear   VRT 06-MAY-2021
DEFINITION  cation-independent mannose-6-phosphate receptor isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325685
VERSION     XP_041325685.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469751.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2377
                     /product="cation-independent mannose-6-phosphate receptor
                     isoform X4"
                     /calculated_mol_wt=265469
     Region          31..152
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          172..317
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          320..471
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          480..614
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          619..771
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          921..1067
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1130..>1253
                     /region_name="ATG27"
                     /note="Autophagy-related protein 27; cl39051"
                     /db_xref="CDD:476860"
     Region          1210..1349
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1502..1620
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1647..1780
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1789..1828
                     /region_name="fn2"
                     /note="Fibronectin type II domain; pfam00040"
                     /db_xref="CDD:459645"
     Site            order(1793,1795,1800,1812,1819,1825,1827)
                     /site_type="active"
                     /note="putative gelatin-binding site [active]"
                     /db_xref="CDD:238019"
     Region          1835..1968
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          1972..>2085
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     Region          2126..>2167
                     /region_name="CIMR"
                     /note="Cation-independent mannose-6-phosphate receptor
                     repeat; pfam00878"
                     /db_xref="CDD:425923"
     CDS             1..2377
                     /gene="IGF2R"
                     /coded_by="XM_041469751.1:8..7141"
                     /db_xref="GeneID:121354816"
ORIGIN      
        1 mesqvknccl ftgrhsvehp vlnhlelytk gtpefvtate cvhyfewrtf vackkdlfkp
       61 akevpcyafd edlkkhdlnp liqvsghylv ddsdddslfi nvcrdigsss getrkcpags
      121 aacllrdgla ydvgrpkeql klqdkdrlvl syerqykhde erpsfclghn pavtitfvcp
      181 skrgeesagp kltaktncry eiewvteyac hrdylesktc iltneqhdis idlsplnqfs
      241 eyvtpysakd dkeeyyyyln vcgkttagnc kddtgyissc qvklsnnqqk vagrfanqtl
      301 rysdgdltli ypngdacssg fqrmtvinfe cnetagndgr gnpvftgevd ctyfftwdtk
      361 yacvkekkdl lcrvtdkrkh ydlsplvrss esaqnweavd ssfsevgrkh yyinvchkvl
      421 krggafscsd gaavcsvdkq nnsknlgtfv sspkkvgeni qltysngdsc pskekekmqt
      481 vitlicrpgd lesapilmae recsyafewy taaacvlskt egddcqvsdp qagfsfdlsp
      541 lakaksfyti ttkeyffyis vcgslpddrc htksaacqva rsddqswslg lpssklsyyd
      601 gliqltykng aaynnenktq rstlitflcd hdagigqpey qkednytynf rwytehacpe
      661 iplecvvtdr ntmdqydlsr laksekrgen wyamdnsrps erkkyyinvc rpliavpgcd
      721 rrasvcqmey nhvstsysev tsisnlgvas kelvierpgh vsltyangsv cinadgkttt
      781 ytttihfvcs rgtlsssprf vaildcvatf lweteaacpi ketkddsqsc sardpntgfv
      841 fnlqplasee gytvtgngkt fslnicghlp ycgkingkta agcerenltp lrpleldktl
      901 ylssegfltl tyrgplrves gtsdmfrvtf icndsypgel kfvreeinsv ldvhdtffef
      961 htalacapap vdcqvtdaag neydlsdlsk dgepwvaidt skeakkrtff lnvckplpyv
     1021 tgcpggaigs cvkytdkskn lgviqinpqa atdgslsiiy lngdtckdnq rystriifqc
     1081 dqttgspvle qendcefvfv wrtlaacpvh kaegkdcqvk dpryghvfnl kplsgknikv
     1141 stdeydyyfs vcgeitehcr tkghgvascq vkkmdptfek vaglrtdklt fkngliminy
     1201 tsgekchkiy erstailfyc dktssepvfl ketpdctymf ewhtqyacpp vkstecsykd
     1261 degnfydfss ltrhrenwea iaisattqky yinvcrplvp ysatrscpsd aaaslvegtk
     1321 ctslgevadg prwenvtfil kyingdqcpd ktrkkttilr lkcdenries kpelitaied
     1381 ceytflwfta aacplksnvq ndcrvtnpst ghlfdltslk resgytisds hnriielnvc
     1441 aevksscang aavcitsgrk pvnagkqskt lsyedqvlkl vyedgdpcpa dpalkhksyf
     1501 sfvcksdagd esrpvfvsfd eqtctsyfsw htslaceeev kcsvmndssi idlsplihrt
     1561 gyyeafvded itdvspdfyi niceplnpik dvncppgaav cmvpvnespi digrvteppq
     1621 fnkavnevyi tynsttpcqi nnglnytsvi afhcgqgtsl gkpkmirkid ctfvfewetp
     1681 lvcpdkvktl gcsvideqlh ytfnlsslsg rsfevfsgsn nyhigvcsvg lpqgkcrdga
     1741 vcltsksgvs sfgnikemrl dyshqdetvi lqytggdrcp pvtekgelcv fpfkykgkty
     1801 kecitegknk pwcattenyq gdekwgfcss ttarrestii ftcdenagvg spyllsetlg
     1861 cavtfewktq avcppkkmec kfvqkhrtyd lrmlssltgs wiffhngnsy yvnlcqrvhe
     1921 gptgcperas icrksyngdv qvlglvhtqk lnvtgdtvyi syssgqecrk nkkvttiiel
     1981 kcartvgmpm lqrfdeenca yyitwdtraa cavkqqevev vngtvinpat gknfslgdvy
     2041 sklytasgdv rtngdkyvyq iqlsgitnss specfganic qvktneqrvr rvgsarnaky
     2101 yvddddldvi fssdsrcgkd kskfvsstif fhcnpeekeg ipeflhetad cqylftwyts
     2161 avcplistnd pgnnqhqtde etqihkglsr rsqavgavls vllvvltacl iillfykker
     2221 reivinkitn ccrrssgvsy kytkinseee anenetewlm eevaapnprt akggqenghi
     2281 atksvtseal tslhvddlds edevltipdv kiqtgrgldk skhpqkkphs fgsdnksyll
     2341 nggketkaia rpgqhqaqns tntasfhdds dedllni
//
LOCUS       XP_041325686            1336 aa            linear   VRT 06-MAY-2021
DEFINITION  SAM and SH3 domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325686
VERSION     XP_041325686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1336
                     /product="SAM and SH3 domain-containing protein 1 isoform
                     X1"
                     /calculated_mol_wt=147797
     Region          2..64
                     /region_name="SAM_Samd5"
                     /note="SAM domain of Samd5 subfamily; cd09527"
                     /db_xref="CDD:188926"
     Region          493..646
                     /region_name="SLY"
                     /note="Lymphocyte signaling adaptor protein; pfam12485"
                     /db_xref="CDD:463602"
     Region          648..704
                     /region_name="SH3_SASH1"
                     /note="Src homology 3 domain of SAM And SH3 Domain
                     Containing Protein 1; cd11967"
                     /db_xref="CDD:212900"
     Site            order(654,656,659,665,683..684,697,699..700)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212900"
     Region          724..789
                     /region_name="SAM_SASH1_repeat1"
                     /note="SAM domain of SASH1 proteins, repeat 1; cd09559"
                     /db_xref="CDD:188958"
     Region          1263..1332
                     /region_name="SAM_SASH1_repeat2"
                     /note="SAM domain of SASH1 proteins, repeat 2; cd09492"
                     /db_xref="CDD:188891"
     CDS             1..1336
                     /gene="SASH1"
                     /coded_by="XM_041469752.1:632..4642"
                     /db_xref="GeneID:121354817"
ORIGIN      
        1 mctnivyewl ktlqlpqyae sfvdngyddl evckqigdpd ldaigvavph hrrriheavr
       61 rlkeaderaa glyftleppp pppapagrcp rraggpeear pggrrgaagg gglvayprlk
      121 lkimirdkli rdginlskpp ysnkdgslgn iddlaqqyad yyntcftdvc ermeelrkrr
      181 vsqdldlekp dtsptslqlr sqieeslgls stastpdter klsihkssse egsvgkadwk
      241 kknkffwqnf rknqkglmrq tskgedvgyv aseitmsdee riqlmmmvke kmitieeala
      301 rlkeyeaqhr qsstvdatew pdgsystldg ssncnsreqs ddeteesvkf krlhklvnst
      361 rrvrkklirv eemkkpsteg veehsldnsp ilddrsalys gvhkkqfyfd sscekqpedd
      421 sdslttspss ssldtwganr klvktfsktd srglikppkk lgtffsypee eksqkvcrsl
      481 tdgemkkslg slshgrtcsf ggfdltnrsl hignssdqmg kegdfvykev ikspsasris
      541 lgkkvksvke tmkkrmskky ssslseqess pgivpgspqs pppdtdsldk pklkaggsve
      601 slrsslsgqs smsgqtvstt dsstsnresv ksedgddeep pyrgpfcgra rvhtdftpsp
      661 ydtdslklkk gdiidiiskp pmgtwmglln nkvgtfkfiy vdvlneeeek pkrptrrrrk
      721 srppqpksve dlldrinlke hmptflfngy edldtfklle eedldelnir dpehravllt
      781 avellqeyds nsdqsgsqek lliegqglsg csprdsgcye ssenlengkt rrtclppsks
      841 aiehsfrdfs rnqlsnyptl pltkstetlq pgekesrlgc ahralkssvk plavtalkkn
      901 rrslpvavcr syetldgpqg vdtwprshsl ddlqgepntn lqdankkvgs fpqdsldiak
      961 kavgsalppq shggsskvdd vmakqgkgaa nsqkgkakel nsvmenaggk papfplknce
     1021 aqpalvmhha trtpleiqsk sfhdlarady apvlkgglea eqkstnearm qpknpsqppp
     1081 vpakkcrerl snglyhppmt tsgnhsslea pclpvkktss stpidchgvp ahrtsseqep
     1141 ssppsplppw lselpetasv qqhvvklgpa sarkvscsrg mdlemvienk lqseeidlte
     1201 epysdkhgrc gipealvqry sedleqpekd vatnmdqirv kqlrkqhrma ipsgglteic
     1261 rkpvspglit svsdwlisig lpmyssllte agfntlskvp slsqtclqka giteerhisk
     1321 llaaarlfkp ldpeai
//
LOCUS       XP_041325687            1224 aa            linear   VRT 06-MAY-2021
DEFINITION  SAM and SH3 domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325687
VERSION     XP_041325687.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469753.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1224
                     /product="SAM and SH3 domain-containing protein 1 isoform
                     X2"
                     /calculated_mol_wt=135212
     Region          381..534
                     /region_name="SLY"
                     /note="Lymphocyte signaling adaptor protein; pfam12485"
                     /db_xref="CDD:463602"
     Region          536..592
                     /region_name="SH3_SASH1"
                     /note="Src homology 3 domain of SAM And SH3 Domain
                     Containing Protein 1; cd11967"
                     /db_xref="CDD:212900"
     Site            order(542,544,547,553,571..572,585,587..588)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212900"
     Region          612..677
                     /region_name="SAM_SASH1_repeat1"
                     /note="SAM domain of SASH1 proteins, repeat 1; cd09559"
                     /db_xref="CDD:188958"
     Region          1151..1220
                     /region_name="SAM_SASH1_repeat2"
                     /note="SAM domain of SASH1 proteins, repeat 2; cd09492"
                     /db_xref="CDD:188891"
     CDS             1..1224
                     /gene="SASH1"
                     /coded_by="XM_041469753.1:32..3706"
                     /db_xref="GeneID:121354817"
ORIGIN      
        1 megeradspa apadsgtsev faqlwadvmg ildgslgnid dlaqqyadyy ntcftdvcer
       61 meelrkrrvs qdldlekpdt sptslqlrsq ieeslglsst astpdterkl sihkssseeg
      121 svgkadwkkk nkffwqnfrk nqkglmrqts kgedvgyvas eitmsdeeri qlmmmvkekm
      181 itieealarl keyeaqhrqs stvdatewpd gsystldgss ncnsreqsdd eteesvkfkr
      241 lhklvnstrr vrkklirvee mkkpstegve ehsldnspil ddrsalysgv hkkqfyfdss
      301 cekqpeddsd slttspssss ldtwganrkl vktfsktdsr glikppkklg tffsypeeek
      361 sqkvcrsltd gemkkslgsl shgrtcsfgg fdltnrslhi gnssdqmgke gdfvykevik
      421 spsasrislg kkvksvketm kkrmskkyss slseqesspg ivpgspqspp pdtdsldkpk
      481 lkaggsvesl rsslsgqssm sgqtvsttds stsnresvks edgddeeppy rgpfcgrarv
      541 htdftpspyd tdslklkkgd iidiiskppm gtwmgllnnk vgtfkfiyvd vlneeeekpk
      601 rptrrrrksr ppqpksvedl ldrinlkehm ptflfngyed ldtfklleee dldelnirdp
      661 ehravlltav ellqeydsns dqsgsqekll iegqglsgcs prdsgcyess enlengktrr
      721 tclppsksai ehsfrdfsrn qlsnyptlpl tkstetlqpg ekesrlgcah ralkssvkpl
      781 avtalkknrr slpvavcrsy etldgpqgvd twprshsldd lqgepntnlq dankkvgsfp
      841 qdsldiakka vgsalppqsh ggsskvddvm akqgkgaans qkgkakelns vmenaggkpa
      901 pfplknceaq palvmhhatr tpleiqsksf hdlaradyap vlkggleaeq kstnearmqp
      961 knpsqpppvp akkcrerlsn glyhppmtts gnhssleapc lpvkktssst pidchgvpah
     1021 rtsseqepss ppsplppwls elpetasvqq hvvklgpasa rkvscsrgmd lemvienklq
     1081 seeidlteep ysdkhgrcgi pealvqryse dleqpekdva tnmdqirvkq lrkqhrmaip
     1141 sgglteicrk pvspglitsv sdwlisiglp myssllteag fntlskvpsl sqtclqkagi
     1201 teerhiskll aaarlfkpld peai
//
LOCUS       XP_041325688            1002 aa            linear   VRT 06-MAY-2021
DEFINITION  SAM and SH3 domain-containing protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325688
VERSION     XP_041325688.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469754.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1002
                     /product="SAM and SH3 domain-containing protein 1 isoform
                     X3"
                     /calculated_mol_wt=110283
     Region          159..312
                     /region_name="SLY"
                     /note="Lymphocyte signaling adaptor protein; pfam12485"
                     /db_xref="CDD:463602"
     Region          314..370
                     /region_name="SH3_SASH1"
                     /note="Src homology 3 domain of SAM And SH3 Domain
                     Containing Protein 1; cd11967"
                     /db_xref="CDD:212900"
     Site            order(320,322,325,331,349..350,363,365..366)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212900"
     Region          390..455
                     /region_name="SAM_SASH1_repeat1"
                     /note="SAM domain of SASH1 proteins, repeat 1; cd09559"
                     /db_xref="CDD:188958"
     Region          929..998
                     /region_name="SAM_SASH1_repeat2"
                     /note="SAM domain of SASH1 proteins, repeat 2; cd09492"
                     /db_xref="CDD:188891"
     CDS             1..1002
                     /gene="SASH1"
                     /coded_by="XM_041469754.1:399..3407"
                     /db_xref="GeneID:121354817"
ORIGIN      
        1 msreqsddet eesvkfkrlh klvnstrrvr kklirveemk kpstegveeh sldnspildd
       61 rsalysgvhk kqfyfdssce kqpeddsdsl ttspssssld twganrklvk tfsktdsrgl
      121 ikppkklgtf fsypeeeksq kvcrsltdge mkkslgslsh grtcsfggfd ltnrslhign
      181 ssdqmgkegd fvykeviksp sasrislgkk vksvketmkk rmskkysssl seqesspgiv
      241 pgspqspppd tdsldkpklk aggsveslrs slsgqssmsg qtvsttdsst snresvksed
      301 gddeeppyrg pfcgrarvht dftpspydtd slklkkgdii diiskppmgt wmgllnnkvg
      361 tfkfiyvdvl neeeekpkrp trrrrksrpp qpksvedlld rinlkehmpt flfngyedld
      421 tfklleeedl delnirdpeh ravlltavel lqeydsnsdq sgsqekllie gqglsgcspr
      481 dsgcyessen lengktrrtc lppsksaieh sfrdfsrnql snyptlpltk stetlqpgek
      541 esrlgcahra lkssvkplav talkknrrsl pvavcrsyet ldgpqgvdtw prshslddlq
      601 gepntnlqda nkkvgsfpqd sldiakkavg salppqshgg sskvddvmak qgkgaansqk
      661 gkakelnsvm enaggkpapf plknceaqpa lvmhhatrtp leiqsksfhd laradyapvl
      721 kggleaeqks tnearmqpkn psqpppvpak kcrerlsngl yhppmttsgn hssleapclp
      781 vkktssstpi dchgvpahrt sseqepsspp splppwlsel petasvqqhv vklgpasark
      841 vscsrgmdle mvienklqse eidlteepys dkhgrcgipe alvqrysedl eqpekdvatn
      901 mdqirvkqlr kqhrmaipsg glteicrkpv spglitsvsd wlisiglpmy ssllteagfn
      961 tlskvpslsq tclqkagite erhiskllaa arlfkpldpe ai
//
LOCUS       XP_041325689            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325689
VERSION     XP_041325689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469755.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="syntaxin-binding protein 5 isoform X1"
                     /calculated_mol_wt=127389
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1083..1143
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1086,1089..1090,1092,1096..1097,1099..1101,
                     1103..1104,1106..1107,1110..1111,1113..1118,1120..1125,
                     1127..1132,1134..1136,1138..1139,1142)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1110
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1150
                     /gene="STXBP5"
                     /coded_by="XM_041469755.1:338..3790"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgaglcdi negtvvpedr cksptsgsgs
      721 pnnsddeqkm nnfiekvktk srkfskmvtn diakmsrkls lptelkpdld vkdnsfsrsr
      781 sssvtsidke sreaisalhf cetftrkadt spspclwvgt tlgtvlvivl nlppggeqrl
      841 lqpvivspsg tilrlkgail rmafldttgs lvppahetwr ehyedkdeke kakkrrpvsv
      901 spspsqeise nqyavicsek qakvislpsq nciykqnite tsfvlrgdiv slsnsiclac
      961 fcanghimtf slpslrplld vyylpltnmr iartfcftdn gqalylvspt eiqrltysqe
     1021 tcenlqemlg elftlvetpe apnrgffkgl fgggaqsldr eelfgesasg kasrslaqhi
     1081 pgpggiegvk gaasgvvgel ararlalder gqklgeleek taamlysads fskhahemml
     1141 kykdkkwyqf
//
LOCUS       XP_041325690            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325690
VERSION     XP_041325690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469756.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="syntaxin-binding protein 5 isoform X1"
                     /calculated_mol_wt=127389
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1083..1143
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1086,1089..1090,1092,1096..1097,1099..1101,
                     1103..1104,1106..1107,1110..1111,1113..1118,1120..1125,
                     1127..1132,1134..1136,1138..1139,1142)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1110
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1150
                     /gene="STXBP5"
                     /coded_by="XM_041469756.1:254..3706"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgaglcdi negtvvpedr cksptsgsgs
      721 pnnsddeqkm nnfiekvktk srkfskmvtn diakmsrkls lptelkpdld vkdnsfsrsr
      781 sssvtsidke sreaisalhf cetftrkadt spspclwvgt tlgtvlvivl nlppggeqrl
      841 lqpvivspsg tilrlkgail rmafldttgs lvppahetwr ehyedkdeke kakkrrpvsv
      901 spspsqeise nqyavicsek qakvislpsq nciykqnite tsfvlrgdiv slsnsiclac
      961 fcanghimtf slpslrplld vyylpltnmr iartfcftdn gqalylvspt eiqrltysqe
     1021 tcenlqemlg elftlvetpe apnrgffkgl fgggaqsldr eelfgesasg kasrslaqhi
     1081 pgpggiegvk gaasgvvgel ararlalder gqklgeleek taamlysads fskhahemml
     1141 kykdkkwyqf
//
LOCUS       XP_041325691            1150 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325691
VERSION     XP_041325691.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469757.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1150
                     /product="syntaxin-binding protein 5 isoform X1"
                     /calculated_mol_wt=127389
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1083..1143
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1086,1089..1090,1092,1096..1097,1099..1101,
                     1103..1104,1106..1107,1110..1111,1113..1118,1120..1125,
                     1127..1132,1134..1136,1138..1139,1142)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1110
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1150
                     /gene="STXBP5"
                     /coded_by="XM_041469757.1:253..3705"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgaglcdi negtvvpedr cksptsgsgs
      721 pnnsddeqkm nnfiekvktk srkfskmvtn diakmsrkls lptelkpdld vkdnsfsrsr
      781 sssvtsidke sreaisalhf cetftrkadt spspclwvgt tlgtvlvivl nlppggeqrl
      841 lqpvivspsg tilrlkgail rmafldttgs lvppahetwr ehyedkdeke kakkrrpvsv
      901 spspsqeise nqyavicsek qakvislpsq nciykqnite tsfvlrgdiv slsnsiclac
      961 fcanghimtf slpslrplld vyylpltnmr iartfcftdn gqalylvspt eiqrltysqe
     1021 tcenlqemlg elftlvetpe apnrgffkgl fgggaqsldr eelfgesasg kasrslaqhi
     1081 pgpggiegvk gaasgvvgel ararlalder gqklgeleek taamlysads fskhahemml
     1141 kykdkkwyqf
//
LOCUS       XP_041325692            1149 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325692
VERSION     XP_041325692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1149
                     /product="syntaxin-binding protein 5 isoform X2"
                     /calculated_mol_wt=127318
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1082..1142
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1085,1088..1089,1091,1095..1096,1098..1100,
                     1102..1103,1105..1106,1109..1110,1112..1117,1119..1124,
                     1126..1131,1133..1135,1137..1138,1141)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1109
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1149
                     /gene="STXBP5"
                     /coded_by="XM_041469758.1:439..3888"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgglcdin egtvvpedrc ksptsgsgsp
      721 nnsddeqkmn nfiekvktks rkfskmvtnd iakmsrklsl ptelkpdldv kdnsfsrsrs
      781 ssvtsidkes reaisalhfc etftrkadts pspclwvgtt lgtvlvivln lppggeqrll
      841 qpvivspsgt ilrlkgailr mafldttgsl vppahetwre hyedkdekek akkrrpvsvs
      901 pspsqeisen qyavicsekq akvislpsqn ciykqnitet sfvlrgdivs lsnsiclacf
      961 canghimtfs lpslrplldv yylpltnmri artfcftdng qalylvspte iqrltysqet
     1021 cenlqemlge lftlvetpea pnrgffkglf gggaqsldre elfgesasgk asrslaqhip
     1081 gpggiegvkg aasgvvgela rarlalderg qklgeleekt aamlysadsf skhahemmlk
     1141 ykdkkwyqf
//
LOCUS       XP_041325694            1114 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325694
VERSION     XP_041325694.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469760.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1114
                     /product="syntaxin-binding protein 5 isoform X3"
                     /calculated_mol_wt=123331
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1047..1107
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1050,1053..1054,1056,1060..1061,1063..1065,
                     1067..1068,1070..1071,1074..1075,1077..1082,1084..1089,
                     1091..1096,1098..1100,1102..1103,1106)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1074
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1114
                     /gene="STXBP5"
                     /coded_by="XM_041469760.1:439..3783"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgaglcdi negtvvpedr cksptsakms
      721 rklslptelk pdldvkdnsf srsrsssvts idkesreais alhfcetftr kadtspspcl
      781 wvgttlgtvl vivlnlppgg eqrllqpviv spsgtilrlk gailrmafld ttgslvppah
      841 etwrehyedk dekekakkrr pvsvspspsq eisenqyavi csekqakvis lpsqnciykq
      901 nitetsfvlr gdivslsnsi clacfcangh imtfslpslr plldvyylpl tnmriartfc
      961 ftdngqalyl vspteiqrlt ysqetcenlq emlgelftlv etpeapnrgf fkglfgggaq
     1021 sldreelfge sasgkasrsl aqhipgpggi egvkgaasgv vgelararla ldergqklge
     1081 leektaamly sadsfskhah emmlkykdkk wyqf
//
LOCUS       XP_041325695            1113 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325695
VERSION     XP_041325695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1113
                     /product="syntaxin-binding protein 5 isoform X4"
                     /calculated_mol_wt=123260
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1046..1106
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1049,1052..1053,1055,1059..1060,1062..1064,
                     1066..1067,1069..1070,1073..1074,1076..1081,1083..1088,
                     1090..1095,1097..1099,1101..1102,1105)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1073
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1113
                     /gene="STXBP5"
                     /coded_by="XM_041469761.1:439..3780"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgglcdin egtvvpedrc ksptsakmsr
      721 klslptelkp dldvkdnsfs rsrsssvtsi dkesreaisa lhfcetftrk adtspspclw
      781 vgttlgtvlv ivlnlppgge qrllqpvivs psgtilrlkg ailrmafldt tgslvppahe
      841 twrehyedkd ekekakkrrp vsvspspsqe isenqyavic sekqakvisl psqnciykqn
      901 itetsfvlrg divslsnsic lacfcanghi mtfslpslrp lldvyylplt nmriartfcf
      961 tdngqalylv spteiqrlty sqetcenlqe mlgelftlve tpeapnrgff kglfgggaqs
     1021 ldreelfges asgkasrsla qhipgpggie gvkgaasgvv gelararlal dergqklgel
     1081 eektaamlys adsfskhahe mmlkykdkkw yqf
//
LOCUS       XP_041325696            1097 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325696
VERSION     XP_041325696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1097
                     /product="syntaxin-binding protein 5 isoform X5"
                     /calculated_mol_wt=121422
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1030..1090
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1033,1036..1037,1039,1043..1044,1046..1048,
                     1050..1051,1053..1054,1057..1058,1060..1065,1067..1072,
                     1074..1079,1081..1083,1085..1086,1089)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1057
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1097
                     /gene="STXBP5"
                     /coded_by="XM_041469762.1:439..3732"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgaglcdi negtvvpedr cksptsdvkd
      721 nsfsrsrsss vtsidkesre aisalhfcet ftrkadtsps pclwvgttlg tvlvivlnlp
      781 pggeqrllqp vivspsgtil rlkgailrma fldttgslvp pahetwrehy edkdekekak
      841 krrpvsvsps psqeisenqy avicsekqak vislpsqnci ykqnitetsf vlrgdivsls
      901 nsiclacfca nghimtfslp slrplldvyy lpltnmriar tfcftdngqa lylvspteiq
      961 rltysqetce nlqemlgelf tlvetpeapn rgffkglfgg gaqsldreel fgesasgkas
     1021 rslaqhipgp ggiegvkgaa sgvvgelara rlaldergqk lgeleektaa mlysadsfsk
     1081 hahemmlkyk dkkwyqf
//
LOCUS       XP_041325697            1096 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-binding protein 5 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325697
VERSION     XP_041325697.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469763.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1096
                     /product="syntaxin-binding protein 5 isoform X6"
                     /calculated_mol_wt=121351
     Region          48..>281
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          62..95
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          103..141
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          146..192
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..234
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          241..276
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          276..385
                     /region_name="LLGL"
                     /note="LLGL2; pfam08366"
                     /db_xref="CDD:462446"
     Region          1029..1089
                     /region_name="R-SNARE_STXBP5"
                     /note="SNARE domain of STXBP5; cd15893"
                     /db_xref="CDD:277246"
     Site            order(1032,1035..1036,1038,1042..1043,1045..1047,
                     1049..1050,1052..1053,1056..1057,1059..1064,1066..1071,
                     1073..1078,1080..1082,1084..1085,1088)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277246"
     Site            1056
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277246"
     CDS             1..1096
                     /gene="STXBP5"
                     /coded_by="XM_041469763.1:438..3728"
                     /db_xref="GeneID:121354819"
ORIGIN      
        1 mrkfnirkvl dgltavsava sassaaqqqq agnreteiqe tlqsehfqlc ktvrhgfpyq
       61 psalafdpvq kilaigtqtg alrlfgrpgv ecycqhdsga aviqlqflin egalvsalad
      121 dtlhlwnlrq krpailhslk fnreritfch lpfqskwlyv gtergnihiv nvesftlsgy
      181 vimwnkaiel sskshpgpvv hisdnpmdeg klligfesgt vvlwdlkskk adyrythdea
      241 ihsvawhheg kqficshsdg tltiwnvksp tkpfqtitph gkqlkdgkkp epckpilkve
      301 ykttragepf iilsgglsyd tvgrrpcltv mhgkstavle mdysivdflt lcetpypndf
      361 qepyavvvll ekdlvlidla qngypifenp ypltihespv tcceyfadcp vdlipalysv
      421 garqkrqgys kkewpisggn wgvitqsyse iiitghadgs ikfwdasait lqvlyklkta
      481 kvfeksrnkd erpntdivde dpyaiqiisw caesrmlcia gvsahviiyr fskqevttev
      541 ipmlevrlly eindvetpdg eqvppvptpg tgsnpqsivp qshpstssss sdglrdnvpc
      601 lkvknsplkq spgyqielvi qlvwvsgepp qqitslains ayglvvfgnc ngiamvdylq
      661 ktvllnlgti elygsndpyr reprsprktr qpsgglcdin egtvvpedrc ksptsdvkdn
      721 sfsrsrsssv tsidkesrea isalhfcetf trkadtspsp clwvgttlgt vlvivlnlpp
      781 ggeqrllqpv ivspsgtilr lkgailrmaf ldttgslvpp ahetwrehye dkdekekakk
      841 rrpvsvspsp sqeisenqya vicsekqakv islpsqnciy kqnitetsfv lrgdivslsn
      901 siclacfcan ghimtfslps lrplldvyyl pltnmriart fcftdngqal ylvspteiqr
      961 ltysqetcen lqemlgelft lvetpeapnr gffkglfggg aqsldreelf gesasgkasr
     1021 slaqhipgpg giegvkgaas gvvgelarar laldergqkl geleektaam lysadsfskh
     1081 ahemmlkykd kkwyqf
//
LOCUS       XP_041325698             698 aa            linear   VRT 06-MAY-2021
DEFINITION  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325698
VERSION     XP_041325698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..698
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..698
                     /product="TGF-beta-activated kinase 1 and MAP3K7-binding
                     protein 2 isoform X1"
                     /calculated_mol_wt=76659
     Region          9..50
                     /region_name="CUE_TAB2_TAB3"
                     /note="CUE domain found in the N-terminal of
                     TGF-beta-activated kinase 1 and MAP3K7-binding proteins
                     TAB2, TAB3 and similar proteins; cd14362"
                     /db_xref="CDD:270545"
     Region          532..>623
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          672..695
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          673..692
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..698
                     /gene="TAB2"
                     /coded_by="XM_041469764.1:496..2592"
                     /db_xref="GeneID:121354820"
ORIGIN      
        1 maqgsqqidi qvlhdlrqkf pevpegvvsr cmlqnnnnld accavlsqes tkylygegdl
       61 sfsddsgipg lrnhmtslnl dlqsqnvyhh gregsrmngs rtlahsvsdg nlqtsqsnne
      121 lfqqepqtap aqvpqgfnvf gmantvsasn pgqhlgfhlg skgvsnlsqq tprfnpimvt
      181 lapniqpgrn tptslhihgv pppvlnspqg nsiyirpyit apsstarqtq qqpgwasqfn
      241 pmhpqqvyqp sqpspwttlp tssttphtss qhstqpnqqg hqtshvympi sspttpqapm
      301 ihssggsqss ahsqyniqni stgprknqie ikleppqrns ssklrstgpr tstvpsslns
      361 qtlsrsqptv yisasppstd evitrgqpkv yisanattgd dqlvrnqptl fistnpgvst
      421 tarnmsgqvs mgpafihhhp pksravgnst tatsprvvvt qpntkytfki tvspnkppav
      481 spgvvsptfe ptnllnlpdh yvepegiqhl tdpvlahvdr isdarklsmg sddaaytqal
      541 lvhqkarmer lqrelevqkk kldklksevn emennltrrr lkrsnsvsqi psleemqqlr
      601 scnrqlqidi dcltkeidlf qargphfnps aihnfydnig flgpvppkpk dqrsivktpk
      661 tvpdtdedeg aqwsctactf lnhpalnrce qcemprhf
//
LOCUS       XP_041325699             680 aa            linear   VRT 06-MAY-2021
DEFINITION  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325699
VERSION     XP_041325699.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469765.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..680
                     /product="TGF-beta-activated kinase 1 and MAP3K7-binding
                     protein 2 isoform X2"
                     /calculated_mol_wt=74359
     Region          9..50
                     /region_name="CUE_TAB2_TAB3"
                     /note="CUE domain found in the N-terminal of
                     TGF-beta-activated kinase 1 and MAP3K7-binding proteins
                     TAB2, TAB3 and similar proteins; cd14362"
                     /db_xref="CDD:270545"
     Region          532..>623
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     CDS             1..680
                     /gene="TAB2"
                     /coded_by="XM_041469765.1:496..2538"
                     /db_xref="GeneID:121354820"
ORIGIN      
        1 maqgsqqidi qvlhdlrqkf pevpegvvsr cmlqnnnnld accavlsqes tkylygegdl
       61 sfsddsgipg lrnhmtslnl dlqsqnvyhh gregsrmngs rtlahsvsdg nlqtsqsnne
      121 lfqqepqtap aqvpqgfnvf gmantvsasn pgqhlgfhlg skgvsnlsqq tprfnpimvt
      181 lapniqpgrn tptslhihgv pppvlnspqg nsiyirpyit apsstarqtq qqpgwasqfn
      241 pmhpqqvyqp sqpspwttlp tssttphtss qhstqpnqqg hqtshvympi sspttpqapm
      301 ihssggsqss ahsqyniqni stgprknqie ikleppqrns ssklrstgpr tstvpsslns
      361 qtlsrsqptv yisasppstd evitrgqpkv yisanattgd dqlvrnqptl fistnpgvst
      421 tarnmsgqvs mgpafihhhp pksravgnst tatsprvvvt qpntkytfki tvspnkppav
      481 spgvvsptfe ptnllnlpdh yvepegiqhl tdpvlahvdr isdarklsmg sddaaytqal
      541 lvhqkarmer lqrelevqkk kldklksevn emennltrrr lkrsnsvsqi psleemqqlr
      601 scnrqlqidi dcltkeidlf qargphfnps aihnfydnig flgpvppkpk assglldffk
      661 lpapspqstp glelkmtfli
//
LOCUS       XP_041325700             624 aa            linear   VRT 06-MAY-2021
DEFINITION  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325700
VERSION     XP_041325700.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469766.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..624
                     /product="TGF-beta-activated kinase 1 and MAP3K7-binding
                     protein 2 isoform X3"
                     /calculated_mol_wt=68495
     Region          458..>549
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          598..621
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          599..618
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..624
                     /gene="TAB2"
                     /coded_by="XM_041469766.1:1010..2884"
                     /db_xref="GeneID:121354820"
ORIGIN      
        1 mtslnldlqs qnvyhhgreg srmngsrtla hsvsdgnlqt sqsnnelfqq epqtapaqvp
       61 qgfnvfgman tvsasnpgqh lgfhlgskgv snlsqqtprf npimvtlapn iqpgrntpts
      121 lhihgvpppv lnspqgnsiy irpyitapss tarqtqqqpg wasqfnpmhp qqvyqpsqps
      181 pwttlptsst tphtssqhst qpnqqghqts hvympisspt tpqapmihss ggsqssahsq
      241 yniqnistgp rknqieikle ppqrnssskl rstgprtstv psslnsqtls rsqptvyisa
      301 sppstdevit rgqpkvyisa nattgddqlv rnqptlfist npgvsttarn msgqvsmgpa
      361 fihhhppksr avgnsttats prvvvtqpnt kytfkitvsp nkppavspgv vsptfeptnl
      421 lnlpdhyvep egiqhltdpv lahvdrisda rklsmgsdda aytqallvhq karmerlqre
      481 levqkkkldk lksevnemen nltrrrlkrs nsvsqipsle emqqlrscnr qlqididclt
      541 keidlfqarg phfnpsaihn fydnigflgp vppkpkdqrs ivktpktvpd tdedegaqws
      601 ctactflnhp alnrceqcem prhf
//
LOCUS       XP_041325701             568 aa            linear   VRT 06-MAY-2021
DEFINITION  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325701
VERSION     XP_041325701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469767.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..568
                     /product="TGF-beta-activated kinase 1 and MAP3K7-binding
                     protein 2 isoform X4"
                     /calculated_mol_wt=61242
     Region          9..50
                     /region_name="CUE_TAB2_TAB3"
                     /note="CUE domain found in the N-terminal of
                     TGF-beta-activated kinase 1 and MAP3K7-binding proteins
                     TAB2, TAB3 and similar proteins; cd14362"
                     /db_xref="CDD:270545"
     CDS             1..568
                     /gene="TAB2"
                     /coded_by="XM_041469767.1:496..2202"
                     /db_xref="GeneID:121354820"
ORIGIN      
        1 maqgsqqidi qvlhdlrqkf pevpegvvsr cmlqnnnnld accavlsqes tkylygegdl
       61 sfsddsgipg lrnhmtslnl dlqsqnvyhh gregsrmngs rtlahsvsdg nlqtsqsnne
      121 lfqqepqtap aqvpqgfnvf gmantvsasn pgqhlgfhlg skgvsnlsqq tprfnpimvt
      181 lapniqpgrn tptslhihgv pppvlnspqg nsiyirpyit apsstarqtq qqpgwasqfn
      241 pmhpqqvyqp sqpspwttlp tssttphtss qhstqpnqqg hqtshvympi sspttpqapm
      301 ihssggsqss ahsqyniqni stgprknqie ikleppqrns ssklrstgpr tstvpsslns
      361 qtlsrsqptv yisasppstd evitrgqpkv yisanattgd dqlvrnqptl fistnpgvst
      421 tarnmsgqvs mgpafihhhp pksravgnst tatsprvvvt qpntkytfki tvspnkppav
      481 spgvvsptfe ptnllnlpdh yvepegiqhl tdpvlahvdr isdarklsmg sddaaytqas
      541 sglldffklp apspqstpgl elkmtfli
//
LOCUS       XP_041325702             609 aa            linear   VRT 06-MAY-2021
DEFINITION  probable ribonuclease ZC3H12D [Pyrgilauda ruficollis].
ACCESSION   XP_041325702
VERSION     XP_041325702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..609
                     /product="probable ribonuclease ZC3H12D"
                     /calculated_mol_wt=67387
     Region          27..68
                     /region_name="UBA_6"
                     /note="UBA-like domain; pfam18039"
                     /db_xref="CDD:407876"
     Region          114..244
                     /region_name="PIN_Zc3h12-like"
                     /note="PRORP-like PIN domain of ribonuclease Zc3h12a and
                     related proteins; cd18729"
                     /db_xref="CDD:350296"
     Region          281..299
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     CDS             1..609
                     /gene="ZC3H12D"
                     /coded_by="XM_041469768.1:194..2023"
                     /db_xref="GeneID:121354821"
ORIGIN      
        1 malassipsk aapphsrkvs aagvevhqsk mdffcklgyg kqdickvlen lgqealeddv
       61 lkelirmgsk pqalenqaqp sqlklvargs cstalgpkwl gedesdssds lrpividgsn
      121 vamshgnkev fscwgiqlav dwfrerghty ikvfvplwrk epprqespia dqyileelek
      181 qsilvytpsr kvkgkrvvcy ddryivkvay erdgvivsnd hyrdlqnenp ewkwfieqrl
      241 lmysfvsnrf mppddplgrh gptlsnflsk kpvlpekkwq pcpygkkcty gnkckfyhpe
      301 rqhqaqlsva delraktkvp lapgkeeerc qcspceacte tlreargcsg psccpgrpqg
      361 scseqtfraw psspgsdlrl dqrlpqpepl leamsglsis dgaygcgwsv ctsgdravmd
      421 sphpcsglrh kllalghpqg lerpgsprcp fqgappaqgg mcpergware rpaghgtghg
      481 srsfprgarh qqalqtqhpl vpqctalcpd rlppygqpqp qpqrgvprpp pgqplrless
      541 kgtglfqkar aypdasygdy wptpaarpps arqinihrel cspypyggms qvmtlypsiq
      601 dkgtgappl
//
LOCUS       XP_041325703             409 aa            linear   VRT 06-MAY-2021
DEFINITION  uronyl 2-sulfotransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041325703
VERSION     XP_041325703.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469769.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="uronyl 2-sulfotransferase"
                     /calculated_mol_wt=47645
     Region          108..353
                     /region_name="Sulfotransfer_2"
                     /note="Sulfotransferase family; cl22970"
                     /db_xref="CDD:451469"
     CDS             1..409
                     /gene="UST"
                     /coded_by="XM_041469769.1:362..1591"
                     /db_xref="GeneID:121354823"
ORIGIN      
        1 mkkkqqhggg ecpapwppaa aaaagggpgq ggglmrrrpl sllpflslrd yvfcmatlll
       61 fclgslfyql nggpphflla lrhclgnsty lddhgpppqk vlpfpsqvvy nrvgkcgsrt
      121 vvlllrilse khgfnlvtsd ihnktrltkn eqmeliknis taeqpylftr hvhflnfsrf
      181 ggdqpvyini irdpvnrfls nyffrrfgdw rgeqnhmirt pnmrqeeryl dinvcileny
      241 pecsnprlfy iipyfcgqhp rcrepgewal erakvnvnen fllvgileel edvllllerf
      301 lphyfkdvls iyknpehrkl gnltvtvkkt vpspeaiqil yqrmryeyef yyyvkeqfhl
      361 lkrkfglksh irkpsprpef fipspletee pindeeedde kwlediykr
//
LOCUS       XP_041325704             434 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon gamma receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325704
VERSION     XP_041325704.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469770.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..434
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..434
                     /product="interferon gamma receptor 1"
                     /calculated_mol_wt=47573
     Region          27..114
                     /region_name="Tissue_fac"
                     /note="Tissue factor; pfam01108"
                     /db_xref="CDD:460067"
     Region          127..224
                     /region_name="Interfer-bind"
                     /note="Interferon-alpha/beta receptor, fibronectin type
                     III; cl46366"
                     /db_xref="CDD:480706"
     CDS             1..434
                     /gene="IFNGR1"
                     /coded_by="XM_041469770.1:108..1412"
                     /db_xref="GeneID:121354824"
ORIGIN      
        1 mrvplsllav aallaprrsa asqgeqppav psptgivvts enfktvlhwq ypsmsetprf
       61 iveikpynlg hyknvstcvn tsayfcdlsv eicdpysshw lrvkavvgsq qseyveanef
      121 ilqrhgkigp pklnvsrhgd kimvdihhpv fplsciediy shlaylvtvq nskneteely
      181 ednctmpkcs lkipvltegs tycvsaigif dslmvgtpse ercipvpvrq tlsthgivil
      241 cvvigiltvi ptvycgckkl rknniqlpks lvsvmrnlnt gtlagprseg kyipvtsghs
      301 elpvngevnl leiepkeqtv spvnscdees svpspeapak aeevpvqest eeitfdadvq
      361 nsegkesyfi snssqmdics kssgsemppt etqqtvipsn cfkfsgydkp hvpldmlmid
      421 vgeeqpvnay rpte
//
LOCUS       XP_041325705             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325705
VERSION     XP_041325705.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469771.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469771.1:284..2560"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325706             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325706
VERSION     XP_041325706.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469772.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469772.1:273..2549"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325708             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325708
VERSION     XP_041325708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469774.1:168..2444"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325709             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325709
VERSION     XP_041325709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469775.1:179..2455"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325710             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325710
VERSION     XP_041325710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469776.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469776.1:578..2854"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325711             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325711
VERSION     XP_041325711.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469777.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469777.1:241..2517"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325712             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325712
VERSION     XP_041325712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469778.1:589..2865"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325713             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325713
VERSION     XP_041325713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469779.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469779.1:252..2528"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325714             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325714
VERSION     XP_041325714.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469780.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469780.1:484..2760"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325715             758 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 30 [Pyrgilauda ruficollis].
ACCESSION   XP_041325715
VERSION     XP_041325715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..758
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..758
                     /product="F-box only protein 30"
                     /calculated_mol_wt=84092
     Region          7..98
                     /region_name="zf-TRAF_2"
                     /note="TRAF-like zinc-finger; pfam15965"
                     /db_xref="CDD:464957"
     Region          623..737
                     /region_name="F-box_4"
                     /note="pfam15966"
                     /db_xref="CDD:464958"
     CDS             1..758
                     /gene="FBXO30"
                     /coded_by="XM_041469781.1:473..2749"
                     /db_xref="GeneID:121354825"
ORIGIN      
        1 meehqqhlhc vncvsrrcmt rpepgiscdl igcplvcgav fhsckaeehr mlcplervpc
       61 lnsgfgcpfi varnkiadhl evcpasvvcc tmewnrwpvs yadrksyenl skdvdeveql
      121 dmalalqdqr mlleslkvat mmskagdqip esreqtsvkp sapdtvhtng lmpvdeesyg
      181 alyqatvett rslaaaldil ntatrdigml ssnlcisphe mkedpqikeq assgiiqdkk
      241 sdsenpdedn vgavggidfd slsqnsqmeq ngscdicydv vqnhdlnlnl snssllcngf
      301 hvenecskvl dhsedlgvsn skpssvange ctashddeal qscsscpvta qvevipadhl
      361 vngnannvll phnaneeeml erqveqerlr nidafsllrh rsyrflvnhy wstpkedkav
      421 dtsdleited pmglqgidli taallfclgd spggrgises ravdvyhvdf gtqtfslpsa
      481 ilatntmvge iasasacdha npqlsnpspf qtlgldlvle yvaryqtkqr smftfvcgql
      541 frrnefsshf knvhgdihag lngwmeqrcp layygctysq rrfcpstqga kiihdrhlrs
      601 fgvqpcistv lvepakscli glhndhlssl pfevlqhias fldgfslcql srvsrlmrdv
      661 cgsllqargm villwekrkc pegsswqvke kvwrfstafc tvnewkfadi vsmadhlkkc
      721 synaverree avplpcmcvt reltkegrsl rsvlkpvl
//
LOCUS       XP_041325716             534 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: plasma alpha-L-fucosidase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325716
VERSION     XP_041325716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469782.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="LOW QUALITY PROTEIN: plasma alpha-L-fucosidase"
                     /calculated_mol_wt=59271
     Region          <15..>59
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     Region          96..480
                     /region_name="Alpha_L_fucos"
                     /note="Alpha-L-fucosidase; smart00812"
                     /db_xref="CDD:214829"
     Region          443..531
                     /region_name="Fucosidase_C"
                     /note="Alpha-L-fucosidase C-terminal domain; pfam16757"
                     /db_xref="CDD:465259"
     CDS             1..534
                     /gene="FUCA2"
                     /coded_by="XM_041469782.1:82..1686"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121354826"
ORIGIN      
        1 mgkspreagg vgeerrgsga gwaprgppcp cpasfpfpsp arpspaqpgp sgraapxaps
       61 hrapsgpaaa aaamsgaggr aalalllllg lpglpqarpr yeptwgslda rplpawfdea
      121 kfgvfihwgv fsvpsfgsew fwwywqkekr epyvkfmdtn yppgfsyedf gplftaeffd
      181 pnqwadilka sgakyvvlts khhegftlwg skyswnwnav dvgpkrdlva elaasvrnrt
      241 dlhfglyhsl fewfnplfle datnafntsk fptskslpel yeivtkyqpe iiwsdgdgna
      301 pdtywnstgf lawlyndspv rdtvvtndrw gagsicahgg fytcsdrynp ghllphkwen
      361 cmtvdrsswg yrrdarlrdy lpiedlvkql aetvscggnl lmnigpthdg riavvfeerl
      421 rqvgswlkvn geaiygtkpw raqndtvtpg vwytftpkeg kvnaiflnwp vsgilelgep
      481 raklgetqvk lagyrellkw valgekgmvi alpqltpqqm pcqwgwtlql thvd
//
LOCUS       XP_041325718             369 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal biogenesis factor 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325718
VERSION     XP_041325718.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469784.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="peroxisomal biogenesis factor 3 isoform X1"
                     /calculated_mol_wt=41529
     Region          11..358
                     /region_name="Peroxin-3"
                     /note="pfam04882"
                     /db_xref="CDD:428171"
     CDS             1..369
                     /gene="PEX3"
                     /coded_by="XM_041469784.1:57..1166"
                     /db_xref="GeneID:121354827"
ORIGIN      
        1 mlrslwsflk rhkkkclvlg tvlggvyllg kygqkkirei qereaaeyia qarrqyhfes
       61 nqrtcnmtvl smlptlrdal mhqlnseslt sllknrpank leiwedlkii sftrsivavy
      121 stcmlvvllr vqlniiggyi yldnaalgkn gttplappev qqqylssiqh llgdglteli
      181 tivkqavhkv fgsislkqtl slleleqklk direvvehkd sdqiasyspl chylmpdeen
      241 plasqacglt erdiatikll netrdmlesp dfstvlstcl nrgfsrlldn maeffrptek
      301 dlsqnssvns lssvslplak iipiingqih svcsetpshf vqdllmmeqv kdfaanvyea
      361 fstpqqlek
//
LOCUS       XP_041325719             312 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal biogenesis factor 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325719
VERSION     XP_041325719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="peroxisomal biogenesis factor 3 isoform X2"
                     /calculated_mol_wt=35276
     Region          11..290
                     /region_name="Peroxin-3"
                     /note="pfam04882"
                     /db_xref="CDD:428171"
     CDS             1..312
                     /gene="PEX3"
                     /coded_by="XM_041469785.1:57..995"
                     /db_xref="GeneID:121354827"
ORIGIN      
        1 mlrslwsflk rhkkkclvlg tvlggvyllg kygqkkirei qereaaeyia qarrqyhfes
       61 nqrtcnmtvl smlptlrdal mhqlnseslt sllknrpank leiwedlkii sftrsivavy
      121 stcmlvvllr vqlniiggyi yldnaalgkn gttplappev qqqylssiqh llgdglteli
      181 tivkqavhkv fgsislkqtl slleleqklk direvvehkd sdqiasyspl chylmpdeen
      241 plasqacglt erdiatikll netrdmlesp dfstvlstcl nrgfsrlldn maeffrptek
      301 dlsqnssvnr tc
//
LOCUS       XP_041325720             177 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA-specific adenosine deaminase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325720
VERSION     XP_041325720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469786.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..177
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..177
                     /product="tRNA-specific adenosine deaminase 2"
                     /calculated_mol_wt=19731
     Region          11..160
                     /region_name="TadA"
                     /note="tRNA(Arg) A34 adenosine deaminase TadA
                     [Translation, ribosomal structure and biogenesis];
                     COG0590"
                     /db_xref="CDD:440355"
     CDS             1..177
                     /gene="ADAT2"
                     /coded_by="XM_041469786.1:27..560"
                     /db_xref="GeneID:121354828"
ORIGIN      
        1 maeageaavl awmdqalema kealekgevp vgcllvynge vigrgrnevn etknatrhae
       61 mvaidqvldw ckqhkrdyre vfpqlvlyvt vepcimcaaa lrlmkiprvv ygcrnerfgg
      121 cgsvlsissd dmvdsgdpfe cssgyraeea vellkafyrq enpnapkskv rkkdrrq
//
LOCUS       XP_041325721            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325721
VERSION     XP_041325721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X1"
                     /calculated_mol_wt=127692
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <436..>644
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          635..710
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(645..646,648..650,652,657,660,663,667,692,696..697,
                     699..701,703)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          709..1090
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(717..720,723,725,738,740,772,788..791,834,838..839,
                     841,851..852)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1139
                     /gene="LATS1"
                     /coded_by="XM_041469787.1:3648..7067"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv nagmkpagav qqsvnrkqsw
      181 kgskeslvpq rhgpslaegv vyrsespssq pdvgrplsgs giaafaqahp angqrvnppp
      241 lpqirsvtpp pppprgqtpp prgttpppps wepnsqtkry sgnmeyvisr ispvppgawq
      301 dgyppppmnp ppmnssaqgq rgmsavpigr qpiimqssan skfsfpsgra gmqngncqae
      361 fivhqnvvsg nsvsrqpppy pmnpnnrqsp talqmqaggs appsaytngn ipqaimvpnr
      421 nshnlelynt nvagipasws qpspvqpqss pgnghdmpaw qpsipvrsns fnnhhgsrqs
      481 hsgssqpsat tvtaitpapi qqpvksmrvl kpelqtalap shpswmpqpv qtvqaipfsd
      541 spstnmavms pvaeapnyqg ppppypkhll hqnpsvnlye agpklnkeep pplsredene
      601 knyecvdstd kekkqittsp vpvrknkkde erresriqsy spqafkffme qhvenilksh
      661 qqrlhrkkql enemmrvgls peardqmrkm lcqkesnyir lrrakmdksm fvkiktlgvg
      721 afgevclark vdtnalyatk tlrkkdvllr nqvahvkaer dilaeadnew vvrlyysfqd
      781 kdnlyfvmdy ipggdmmsll irmgvfpenl arfytaeltc avesvhkmgf ihrdikpdni
      841 lidrdghikl tdfglctgfr wthdskyyqs gdharqdsmd fssewgdpan crcgdrlkpl
      901 erraarqhqr clahslvgtp nyiapevllr tgytqlcdww svgvilfeml vgqppflaqt
      961 pletqmkvin wqtalhippq akltpeasdl iiklcrgped rlgkngadei kahpffktid
     1021 fssdlrrqsa fyipkiahpt dtsnfdpvdp dklwsdddke gnrndtlngw ykngkhpeha
     1081 fyeftfrrff ddngypynnp kpieyeygss qnseqqsddd ddddeqdsrg vqsrdlvyv
//
LOCUS       XP_041325722            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325722
VERSION     XP_041325722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X1"
                     /calculated_mol_wt=127692
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <436..>644
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          635..710
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(645..646,648..650,652,657,660,663,667,692,696..697,
                     699..701,703)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          709..1090
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(717..720,723,725,738,740,772,788..791,834,838..839,
                     841,851..852)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1139
                     /gene="LATS1"
                     /coded_by="XM_041469788.1:290..3709"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv nagmkpagav qqsvnrkqsw
      181 kgskeslvpq rhgpslaegv vyrsespssq pdvgrplsgs giaafaqahp angqrvnppp
      241 lpqirsvtpp pppprgqtpp prgttpppps wepnsqtkry sgnmeyvisr ispvppgawq
      301 dgyppppmnp ppmnssaqgq rgmsavpigr qpiimqssan skfsfpsgra gmqngncqae
      361 fivhqnvvsg nsvsrqpppy pmnpnnrqsp talqmqaggs appsaytngn ipqaimvpnr
      421 nshnlelynt nvagipasws qpspvqpqss pgnghdmpaw qpsipvrsns fnnhhgsrqs
      481 hsgssqpsat tvtaitpapi qqpvksmrvl kpelqtalap shpswmpqpv qtvqaipfsd
      541 spstnmavms pvaeapnyqg ppppypkhll hqnpsvnlye agpklnkeep pplsredene
      601 knyecvdstd kekkqittsp vpvrknkkde erresriqsy spqafkffme qhvenilksh
      661 qqrlhrkkql enemmrvgls peardqmrkm lcqkesnyir lrrakmdksm fvkiktlgvg
      721 afgevclark vdtnalyatk tlrkkdvllr nqvahvkaer dilaeadnew vvrlyysfqd
      781 kdnlyfvmdy ipggdmmsll irmgvfpenl arfytaeltc avesvhkmgf ihrdikpdni
      841 lidrdghikl tdfglctgfr wthdskyyqs gdharqdsmd fssewgdpan crcgdrlkpl
      901 erraarqhqr clahslvgtp nyiapevllr tgytqlcdww svgvilfeml vgqppflaqt
      961 pletqmkvin wqtalhippq akltpeasdl iiklcrgped rlgkngadei kahpffktid
     1021 fssdlrrqsa fyipkiahpt dtsnfdpvdp dklwsdddke gnrndtlngw ykngkhpeha
     1081 fyeftfrrff ddngypynnp kpieyeygss qnseqqsddd ddddeqdsrg vqsrdlvyv
//
LOCUS       XP_041325723            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325723
VERSION     XP_041325723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X1"
                     /calculated_mol_wt=127692
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <436..>644
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          635..710
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(645..646,648..650,652,657,660,663,667,692,696..697,
                     699..701,703)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          709..1090
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(717..720,723,725,738,740,772,788..791,834,838..839,
                     841,851..852)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1139
                     /gene="LATS1"
                     /coded_by="XM_041469789.1:285..3704"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv nagmkpagav qqsvnrkqsw
      181 kgskeslvpq rhgpslaegv vyrsespssq pdvgrplsgs giaafaqahp angqrvnppp
      241 lpqirsvtpp pppprgqtpp prgttpppps wepnsqtkry sgnmeyvisr ispvppgawq
      301 dgyppppmnp ppmnssaqgq rgmsavpigr qpiimqssan skfsfpsgra gmqngncqae
      361 fivhqnvvsg nsvsrqpppy pmnpnnrqsp talqmqaggs appsaytngn ipqaimvpnr
      421 nshnlelynt nvagipasws qpspvqpqss pgnghdmpaw qpsipvrsns fnnhhgsrqs
      481 hsgssqpsat tvtaitpapi qqpvksmrvl kpelqtalap shpswmpqpv qtvqaipfsd
      541 spstnmavms pvaeapnyqg ppppypkhll hqnpsvnlye agpklnkeep pplsredene
      601 knyecvdstd kekkqittsp vpvrknkkde erresriqsy spqafkffme qhvenilksh
      661 qqrlhrkkql enemmrvgls peardqmrkm lcqkesnyir lrrakmdksm fvkiktlgvg
      721 afgevclark vdtnalyatk tlrkkdvllr nqvahvkaer dilaeadnew vvrlyysfqd
      781 kdnlyfvmdy ipggdmmsll irmgvfpenl arfytaeltc avesvhkmgf ihrdikpdni
      841 lidrdghikl tdfglctgfr wthdskyyqs gdharqdsmd fssewgdpan crcgdrlkpl
      901 erraarqhqr clahslvgtp nyiapevllr tgytqlcdww svgvilfeml vgqppflaqt
      961 pletqmkvin wqtalhippq akltpeasdl iiklcrgped rlgkngadei kahpffktid
     1021 fssdlrrqsa fyipkiahpt dtsnfdpvdp dklwsdddke gnrndtlngw ykngkhpeha
     1081 fyeftfrrff ddngypynnp kpieyeygss qnseqqsddd ddddeqdsrg vqsrdlvyv
//
LOCUS       XP_041325724            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325724
VERSION     XP_041325724.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469790.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X1"
                     /calculated_mol_wt=127692
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <436..>644
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          635..710
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(645..646,648..650,652,657,660,663,667,692,696..697,
                     699..701,703)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          709..1090
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(717..720,723,725,738,740,772,788..791,834,838..839,
                     841,851..852)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1139
                     /gene="LATS1"
                     /coded_by="XM_041469790.1:280..3699"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv nagmkpagav qqsvnrkqsw
      181 kgskeslvpq rhgpslaegv vyrsespssq pdvgrplsgs giaafaqahp angqrvnppp
      241 lpqirsvtpp pppprgqtpp prgttpppps wepnsqtkry sgnmeyvisr ispvppgawq
      301 dgyppppmnp ppmnssaqgq rgmsavpigr qpiimqssan skfsfpsgra gmqngncqae
      361 fivhqnvvsg nsvsrqpppy pmnpnnrqsp talqmqaggs appsaytngn ipqaimvpnr
      421 nshnlelynt nvagipasws qpspvqpqss pgnghdmpaw qpsipvrsns fnnhhgsrqs
      481 hsgssqpsat tvtaitpapi qqpvksmrvl kpelqtalap shpswmpqpv qtvqaipfsd
      541 spstnmavms pvaeapnyqg ppppypkhll hqnpsvnlye agpklnkeep pplsredene
      601 knyecvdstd kekkqittsp vpvrknkkde erresriqsy spqafkffme qhvenilksh
      661 qqrlhrkkql enemmrvgls peardqmrkm lcqkesnyir lrrakmdksm fvkiktlgvg
      721 afgevclark vdtnalyatk tlrkkdvllr nqvahvkaer dilaeadnew vvrlyysfqd
      781 kdnlyfvmdy ipggdmmsll irmgvfpenl arfytaeltc avesvhkmgf ihrdikpdni
      841 lidrdghikl tdfglctgfr wthdskyyqs gdharqdsmd fssewgdpan crcgdrlkpl
      901 erraarqhqr clahslvgtp nyiapevllr tgytqlcdww svgvilfeml vgqppflaqt
      961 pletqmkvin wqtalhippq akltpeasdl iiklcrgped rlgkngadei kahpffktid
     1021 fssdlrrqsa fyipkiahpt dtsnfdpvdp dklwsdddke gnrndtlngw ykngkhpeha
     1081 fyeftfrrff ddngypynnp kpieyeygss qnseqqsddd ddddeqdsrg vqsrdlvyv
//
LOCUS       XP_041325725            1139 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325725
VERSION     XP_041325725.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469791.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1139
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X1"
                     /calculated_mol_wt=127692
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <436..>644
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          635..710
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(645..646,648..650,652,657,660,663,667,692,696..697,
                     699..701,703)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          709..1090
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(717..720,723,725,738,740,772,788..791,834,838..839,
                     841,851..852)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1139
                     /gene="LATS1"
                     /coded_by="XM_041469791.1:291..3710"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv nagmkpagav qqsvnrkqsw
      181 kgskeslvpq rhgpslaegv vyrsespssq pdvgrplsgs giaafaqahp angqrvnppp
      241 lpqirsvtpp pppprgqtpp prgttpppps wepnsqtkry sgnmeyvisr ispvppgawq
      301 dgyppppmnp ppmnssaqgq rgmsavpigr qpiimqssan skfsfpsgra gmqngncqae
      361 fivhqnvvsg nsvsrqpppy pmnpnnrqsp talqmqaggs appsaytngn ipqaimvpnr
      421 nshnlelynt nvagipasws qpspvqpqss pgnghdmpaw qpsipvrsns fnnhhgsrqs
      481 hsgssqpsat tvtaitpapi qqpvksmrvl kpelqtalap shpswmpqpv qtvqaipfsd
      541 spstnmavms pvaeapnyqg ppppypkhll hqnpsvnlye agpklnkeep pplsredene
      601 knyecvdstd kekkqittsp vpvrknkkde erresriqsy spqafkffme qhvenilksh
      661 qqrlhrkkql enemmrvgls peardqmrkm lcqkesnyir lrrakmdksm fvkiktlgvg
      721 afgevclark vdtnalyatk tlrkkdvllr nqvahvkaer dilaeadnew vvrlyysfqd
      781 kdnlyfvmdy ipggdmmsll irmgvfpenl arfytaeltc avesvhkmgf ihrdikpdni
      841 lidrdghikl tdfglctgfr wthdskyyqs gdharqdsmd fssewgdpan crcgdrlkpl
      901 erraarqhqr clahslvgtp nyiapevllr tgytqlcdww svgvilfeml vgqppflaqt
      961 pletqmkvin wqtalhippq akltpeasdl iiklcrgped rlgkngadei kahpffktid
     1021 fssdlrrqsa fyipkiahpt dtsnfdpvdp dklwsdddke gnrndtlngw ykngkhpeha
     1081 fyeftfrrff ddngypynnp kpieyeygss qnseqqsddd ddddeqdsrg vqsrdlvyv
//
LOCUS       XP_041325726            1138 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325726
VERSION     XP_041325726.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469792.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1138
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X2"
                     /calculated_mol_wt=127621
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <435..>643
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          634..709
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(644..645,647..649,651,656,659,662,666,691,695..696,
                     698..700,702)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          708..1089
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(716..719,722,724,737,739,771,787..790,833,837..838,
                     840,850..851)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1138
                     /gene="LATS1"
                     /coded_by="XM_041469792.1:3648..7064"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv nagmkpgavq qsvnrkqswk
      181 gskeslvpqr hgpslaegvv yrsespssqp dvgrplsgsg iaafaqahpa ngqrvnpppl
      241 pqirsvtppp ppprgqtppp rgttppppsw epnsqtkrys gnmeyvisri spvppgawqd
      301 gyppppmnpp pmnssaqgqr gmsavpigrq piimqssans kfsfpsgrag mqngncqaef
      361 ivhqnvvsgn svsrqpppyp mnpnnrqspt alqmqaggsa ppsaytngni pqaimvpnrn
      421 shnlelyntn vagipaswsq pspvqpqssp gnghdmpawq psipvrsnsf nnhhgsrqsh
      481 sgssqpsatt vtaitpapiq qpvksmrvlk pelqtalaps hpswmpqpvq tvqaipfsds
      541 pstnmavmsp vaeapnyqgp pppypkhllh qnpsvnlyea gpklnkeepp plsredenek
      601 nyecvdstdk ekkqittspv pvrknkkdee rresriqsys pqafkffmeq hvenilkshq
      661 qrlhrkkqle nemmrvglsp eardqmrkml cqkesnyirl rrakmdksmf vkiktlgvga
      721 fgevclarkv dtnalyatkt lrkkdvllrn qvahvkaerd ilaeadnewv vrlyysfqdk
      781 dnlyfvmdyi pggdmmslli rmgvfpenla rfytaeltca vesvhkmgfi hrdikpdnil
      841 idrdghiklt dfglctgfrw thdskyyqsg dharqdsmdf ssewgdpanc rcgdrlkple
      901 rraarqhqrc lahslvgtpn yiapevllrt gytqlcdwws vgvilfemlv gqppflaqtp
      961 letqmkvinw qtalhippqa kltpeasdli iklcrgpedr lgkngadeik ahpffktidf
     1021 ssdlrrqsaf yipkiahptd tsnfdpvdpd klwsdddkeg nrndtlngwy kngkhpehaf
     1081 yeftfrrffd dngypynnpk pieyeygssq nseqqsdddd dddeqdsrgv qsrdlvyv
//
LOCUS       XP_041325727            1135 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325727
VERSION     XP_041325727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1135
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X3"
                     /calculated_mol_wt=127279
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <432..>640
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          631..706
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(641..642,644..646,648,653,656,659,663,688,692..693,
                     695..697,699)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          705..1086
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(713..716,719,721,734,736,768,784..787,830,834..835,
                     837,847..848)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1135
                     /gene="LATS1"
                     /coded_by="XM_041469793.1:3648..7055"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv naagavqqsv nrkqswkgsk
      181 eslvpqrhgp slaegvvyrs espssqpdvg rplsgsgiaa faqahpangq rvnppplpqi
      241 rsvtpppppp rgqtppprgt tppppswepn sqtkrysgnm eyvisrispv ppgawqdgyp
      301 pppmnpppmn ssaqgqrgms avpigrqpii mqssanskfs fpsgragmqn gncqaefivh
      361 qnvvsgnsvs rqpppypmnp nnrqsptalq mqaggsapps aytngnipqa imvpnrnshn
      421 lelyntnvag ipaswsqpsp vqpqsspgng hdmpawqpsi pvrsnsfnnh hgsrqshsgs
      481 sqpsattvta itpapiqqpv ksmrvlkpel qtalapshps wmpqpvqtvq aipfsdspst
      541 nmavmspvae apnyqgpppp ypkhllhqnp svnlyeagpk lnkeepppls redeneknye
      601 cvdstdkekk qittspvpvr knkkdeerre sriqsyspqa fkffmeqhve nilkshqqrl
      661 hrkkqlenem mrvglspear dqmrkmlcqk esnyirlrra kmdksmfvki ktlgvgafge
      721 vclarkvdtn alyatktlrk kdvllrnqva hvkaerdila eadnewvvrl yysfqdkdnl
      781 yfvmdyipgg dmmsllirmg vfpenlarfy taeltcaves vhkmgfihrd ikpdnilidr
      841 dghikltdfg lctgfrwthd skyyqsgdha rqdsmdfsse wgdpancrcg drlkplerra
      901 arqhqrclah slvgtpnyia pevllrtgyt qlcdwwsvgv ilfemlvgqp pflaqtplet
      961 qmkvinwqta lhippqaklt peasdliikl crgpedrlgk ngadeikahp ffktidfssd
     1021 lrrqsafyip kiahptdtsn fdpvdpdklw sdddkegnrn dtlngwykng khpehafyef
     1081 tfrrffddng ypynnpkpie yeygssqnse qqsddddddd eqdsrgvqsr dlvyv
//
LOCUS       XP_041325728            1134 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase LATS1 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325728
VERSION     XP_041325728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1134
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1134
                     /product="serine/threonine-protein kinase LATS1 isoform
                     X4"
                     /calculated_mol_wt=127208
     Region          104..144
                     /region_name="UBA_LATS1"
                     /note="UBA domain found in vertebrate
                     serine/threonine-protein kinase LATS1; cd14397"
                     /db_xref="CDD:270580"
     Region          <431..>639
                     /region_name="PRK10263"
                     /note="DNA translocase FtsK; Provisional"
                     /db_xref="CDD:236669"
     Region          630..705
                     /region_name="MobB_LATS1"
                     /note="Mob-binding domain found in large tumor suppressor
                     homolog 1 (LATS1) and similar proteins; cd21778"
                     /db_xref="CDD:439273"
     Site            order(640..641,643..645,647,652,655,658,662,687,691..692,
                     694..696,698)
                     /site_type="other"
                     /note="Mob binding site [polypeptide binding]"
                     /db_xref="CDD:439273"
     Region          704..1085
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(712..715,718,720,733,735,767,783..786,829,833..834,
                     836,846..847)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     CDS             1..1134
                     /gene="LATS1"
                     /coded_by="XM_041469794.1:3648..7052"
                     /db_xref="GeneID:121354829"
ORIGIN      
        1 mkrsekpegy rqmrpktfpa snytgssqqm lqeireslrn lpkpsdaaka ehsmgkmlpe
       61 dprqgrnppk fvtyhkvlqe irnsllpfan ettsavkgts evnrqmlqdl qaagfdedmv
      121 iqalrqtnnr sieaaiefis kmsyqdprre qmvaaaarpv nagavqqsvn rkqswkgske
      181 slvpqrhgps laegvvyrse spssqpdvgr plsgsgiaaf aqahpangqr vnppplpqir
      241 svtppppppr gqtppprgtt ppppswepns qtkrysgnme yvisrispvp pgawqdgypp
      301 ppmnpppmns saqgqrgmsa vpigrqpiim qssanskfsf psgragmqng ncqaefivhq
      361 nvvsgnsvsr qpppypmnpn nrqsptalqm qaggsappsa ytngnipqai mvpnrnshnl
      421 elyntnvagi paswsqpspv qpqsspgngh dmpawqpsip vrsnsfnnhh gsrqshsgss
      481 qpsattvtai tpapiqqpvk smrvlkpelq talapshpsw mpqpvqtvqa ipfsdspstn
      541 mavmspvaea pnyqgppppy pkhllhqnps vnlyeagpkl nkeeppplsr edeneknyec
      601 vdstdkekkq ittspvpvrk nkkdeerres riqsyspqaf kffmeqhven ilkshqqrlh
      661 rkkqlenemm rvglspeard qmrkmlcqke snyirlrrak mdksmfvkik tlgvgafgev
      721 clarkvdtna lyatktlrkk dvllrnqvah vkaerdilae adnewvvrly ysfqdkdnly
      781 fvmdyipggd mmsllirmgv fpenlarfyt aeltcavesv hkmgfihrdi kpdnilidrd
      841 ghikltdfgl ctgfrwthds kyyqsgdhar qdsmdfssew gdpancrcgd rlkplerraa
      901 rqhqrclahs lvgtpnyiap evllrtgytq lcdwwsvgvi lfemlvgqpp flaqtpletq
      961 mkvinwqtal hippqakltp easdliiklc rgpedrlgkn gadeikahpf fktidfssdl
     1021 rrqsafyipk iahptdtsnf dpvdpdklws dddkegnrnd tlngwykngk hpehafyeft
     1081 frrffddngy pynnpkpiey eygssqnseq qsddddddde qdsrgvqsrd lvyv
//
LOCUS       XP_041325729             495 aa            linear   VRT 06-MAY-2021
DEFINITION  katanin p60 ATPase-containing subunit A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325729
VERSION     XP_041325729.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469795.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="katanin p60 ATPase-containing subunit A1"
                     /calculated_mol_wt=56146
     Region          8..75
                     /region_name="Kp60-NTD"
                     /note="N-terminal domain (NTD) found in katanin p60 (Kp60)
                     ATPase-containing subunit A1, and similar proteins;
                     cd21748"
                     /db_xref="CDD:439297"
     Site            order(10,17,20..23,25,32,54,58,61..62,64..65,68..69,
                     71..72,75)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:439297"
     Region          214..383
                     /region_name="RecA-like_KTNA1"
                     /note="Katanin p60 ATPase-containing subunit A1; cd19522"
                     /db_xref="CDD:410930"
     Site            order(215..218,255..261)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410930"
     Region          407..451
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          <451..493
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..495
                     /gene="KATNA1"
                     /coded_by="XM_041469795.1:141..1628"
                     /db_xref="GeneID:121354831"
ORIGIN      
        1 mlnmslvmii envklareya llgnydsamv yyqgvldqmn kylysvrdty lqqkwqqvwq
       61 eisveakhvk dimktlesfk ldntplkasq qelpahdaev wslpvpaerr pspgprkrqs
      121 apcsdcrghn nrvsaagrgs hrpssrnpsd kgkavrsrek kdqqnkgkee knkstseise
      181 sepkkfdstg ydkdlveale rdiisqnpni rwddiadlve akkllkeavv lpmwmpeffk
      241 girrpwkgvl mvgppgtgkt llakavatec kttffnvsss tltskyrges eklvrllfem
      301 arfyapttif ideidsicsr rgtseeheas rrvkaellvq mdgvggaten ddpskmvmvl
      361 aatnfpwdid ealrrrlekr iyiplpsakg reellkinlr eleladdvdl aniaekmegy
      421 sgaditnvcr daslmamrrr iegltpeeir nlprdemhmp ttmedfeial kkvsksvsaa
      481 diekyekwiv efgsc
//
LOCUS       XP_041325730             495 aa            linear   VRT 06-MAY-2021
DEFINITION  katanin p60 ATPase-containing subunit A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325730
VERSION     XP_041325730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="katanin p60 ATPase-containing subunit A1"
                     /calculated_mol_wt=56146
     Region          8..75
                     /region_name="Kp60-NTD"
                     /note="N-terminal domain (NTD) found in katanin p60 (Kp60)
                     ATPase-containing subunit A1, and similar proteins;
                     cd21748"
                     /db_xref="CDD:439297"
     Site            order(10,17,20..23,25,32,54,58,61..62,64..65,68..69,
                     71..72,75)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:439297"
     Region          214..383
                     /region_name="RecA-like_KTNA1"
                     /note="Katanin p60 ATPase-containing subunit A1; cd19522"
                     /db_xref="CDD:410930"
     Site            order(215..218,255..261)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410930"
     Region          407..451
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          <451..493
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..495
                     /gene="KATNA1"
                     /coded_by="XM_041469796.1:148..1635"
                     /db_xref="GeneID:121354831"
ORIGIN      
        1 mlnmslvmii envklareya llgnydsamv yyqgvldqmn kylysvrdty lqqkwqqvwq
       61 eisveakhvk dimktlesfk ldntplkasq qelpahdaev wslpvpaerr pspgprkrqs
      121 apcsdcrghn nrvsaagrgs hrpssrnpsd kgkavrsrek kdqqnkgkee knkstseise
      181 sepkkfdstg ydkdlveale rdiisqnpni rwddiadlve akkllkeavv lpmwmpeffk
      241 girrpwkgvl mvgppgtgkt llakavatec kttffnvsss tltskyrges eklvrllfem
      301 arfyapttif ideidsicsr rgtseeheas rrvkaellvq mdgvggaten ddpskmvmvl
      361 aatnfpwdid ealrrrlekr iyiplpsakg reellkinlr eleladdvdl aniaekmegy
      421 sgaditnvcr daslmamrrr iegltpeeir nlprdemhmp ttmedfeial kkvsksvsaa
      481 diekyekwiv efgsc
//
LOCUS       XP_041325732             495 aa            linear   VRT 06-MAY-2021
DEFINITION  katanin p60 ATPase-containing subunit A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325732
VERSION     XP_041325732.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469798.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="katanin p60 ATPase-containing subunit A1"
                     /calculated_mol_wt=56146
     Region          8..75
                     /region_name="Kp60-NTD"
                     /note="N-terminal domain (NTD) found in katanin p60 (Kp60)
                     ATPase-containing subunit A1, and similar proteins;
                     cd21748"
                     /db_xref="CDD:439297"
     Site            order(10,17,20..23,25,32,54,58,61..62,64..65,68..69,
                     71..72,75)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:439297"
     Region          214..383
                     /region_name="RecA-like_KTNA1"
                     /note="Katanin p60 ATPase-containing subunit A1; cd19522"
                     /db_xref="CDD:410930"
     Site            order(215..218,255..261)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410930"
     Region          407..451
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          <451..493
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..495
                     /gene="KATNA1"
                     /coded_by="XM_041469798.1:128..1615"
                     /db_xref="GeneID:121354831"
ORIGIN      
        1 mlnmslvmii envklareya llgnydsamv yyqgvldqmn kylysvrdty lqqkwqqvwq
       61 eisveakhvk dimktlesfk ldntplkasq qelpahdaev wslpvpaerr pspgprkrqs
      121 apcsdcrghn nrvsaagrgs hrpssrnpsd kgkavrsrek kdqqnkgkee knkstseise
      181 sepkkfdstg ydkdlveale rdiisqnpni rwddiadlve akkllkeavv lpmwmpeffk
      241 girrpwkgvl mvgppgtgkt llakavatec kttffnvsss tltskyrges eklvrllfem
      301 arfyapttif ideidsicsr rgtseeheas rrvkaellvq mdgvggaten ddpskmvmvl
      361 aatnfpwdid ealrrrlekr iyiplpsakg reellkinlr eleladdvdl aniaekmegy
      421 sgaditnvcr daslmamrrr iegltpeeir nlprdemhmp ttmedfeial kkvsksvsaa
      481 diekyekwiv efgsc
//
LOCUS       XP_041325733             495 aa            linear   VRT 06-MAY-2021
DEFINITION  katanin p60 ATPase-containing subunit A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325733
VERSION     XP_041325733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="katanin p60 ATPase-containing subunit A1"
                     /calculated_mol_wt=56146
     Region          8..75
                     /region_name="Kp60-NTD"
                     /note="N-terminal domain (NTD) found in katanin p60 (Kp60)
                     ATPase-containing subunit A1, and similar proteins;
                     cd21748"
                     /db_xref="CDD:439297"
     Site            order(10,17,20..23,25,32,54,58,61..62,64..65,68..69,
                     71..72,75)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:439297"
     Region          214..383
                     /region_name="RecA-like_KTNA1"
                     /note="Katanin p60 ATPase-containing subunit A1; cd19522"
                     /db_xref="CDD:410930"
     Site            order(215..218,255..261)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:410930"
     Region          407..451
                     /region_name="AAA_lid_3"
                     /note="AAA+ lid domain; pfam17862"
                     /db_xref="CDD:465537"
     Region          <451..493
                     /region_name="Vps4_C"
                     /note="Vps4 C terminal oligomerization domain; pfam09336"
                     /db_xref="CDD:462762"
     CDS             1..495
                     /gene="KATNA1"
                     /coded_by="XM_041469799.1:368..1855"
                     /db_xref="GeneID:121354831"
ORIGIN      
        1 mlnmslvmii envklareya llgnydsamv yyqgvldqmn kylysvrdty lqqkwqqvwq
       61 eisveakhvk dimktlesfk ldntplkasq qelpahdaev wslpvpaerr pspgprkrqs
      121 apcsdcrghn nrvsaagrgs hrpssrnpsd kgkavrsrek kdqqnkgkee knkstseise
      181 sepkkfdstg ydkdlveale rdiisqnpni rwddiadlve akkllkeavv lpmwmpeffk
      241 girrpwkgvl mvgppgtgkt llakavatec kttffnvsss tltskyrges eklvrllfem
      301 arfyapttif ideidsicsr rgtseeheas rrvkaellvq mdgvggaten ddpskmvmvl
      361 aatnfpwdid ealrrrlekr iyiplpsakg reellkinlr eleladdvdl aniaekmegy
      421 sgaditnvcr daslmamrrr iegltpeeir nlprdemhmp ttmedfeial kkvsksvsaa
      481 diekyekwiv efgsc
//
LOCUS       XP_041325734             374 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleoporin Nup43 [Pyrgilauda ruficollis].
ACCESSION   XP_041325734
VERSION     XP_041325734.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469800.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="nucleoporin Nup43"
                     /calculated_mol_wt=41520
     Region          73..>292
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          78..127
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          132..167
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          174..211
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          219..257
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          265..301
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..374
                     /gene="NUP43"
                     /coded_by="XM_041469800.1:50..1174"
                     /db_xref="GeneID:121354832"
ORIGIN      
        1 medvsakfvs qkisrtrwrp lpaaalqppd lfatgswdne dnrisiwsag dlgnaglnge
       61 yhgephllcd iqhngdvmdm qfldqerivv asstgtvtif rhhqnnqtls adhrwekahy
      121 hvdqdtscgg aactgvvcnn peivtvgedg rinlfradqk davrtidnad sstlhavtfl
      181 rtteiltvns igqlkiwdlr qqrnepsqif slagdrvplh cvdrhpnqqh ivatggqdgm
      241 lsiwdirqgt mpvsllnahe aemwevhfhp sdpdhlftcs edgslwhwdt stnvsekpsf
      301 lhqggrstay lshstinqsv vsawlsndpt kdrmeitnli pnqtlsvnsl dvlgpclvyg
      361 tdaeaiyvnr qlfa
//
LOCUS       XP_041325735             324 aa            linear   VRT 06-MAY-2021
DEFINITION  glycoprotein integral membrane protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325735
VERSION     XP_041325735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="glycoprotein integral membrane protein 1"
                     /calculated_mol_wt=36048
     CDS             1..324
                     /gene="GINM1"
                     /coded_by="XM_041469801.1:51..1025"
                     /db_xref="GeneID:121354833"
ORIGIN      
        1 meavlgrrdl lllplslllp plaaallgpa aplgqeairv gvmmlntsge lhkvqvlfni
       61 tyvngqvyln dfpmksgvah itcqtvilen rsldnlpdqq qlgtvsvrim vhewplssts
      121 dlqliviqee vtevdgrqvq qeevteidil vkdlrvlrhs nytvplkesm lyslprdndv
      181 lftlpnlsgk diqdplqtts qyliqqvett vdeetlpgkl petplriepp ssykvmcqwv
      241 edlrkglcrf wfqslpilfs fmevvvvgvv gasliikvlk lilpscenkg illldqvsfv
      301 pvttislpsd lsdrknnlde kact
//
LOCUS       XP_041325737             260 aa            linear   VRT 06-MAY-2021
DEFINITION  protein-L-isoaspartate(D-aspartate) O-methyltransferase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325737
VERSION     XP_041325737.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469803.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..260
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /calculated_mol_wt=26974
     Region          <87..249
                     /region_name="PCMT"
                     /note="Protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase (PCMT); pfam01135"
                     /db_xref="CDD:395902"
     CDS             1..260
                     /gene="PCMT1"
                     /coded_by="XM_041469803.1:6..788"
                     /db_xref="GeneID:121354834"
ORIGIN      
        1 msgargggrv applgeraaa aaaaaagggg eeaapvsale vvsflgkllc avaalkaaly
       61 llrrvclama wksggashse lihnlrsfqa tisaphmhay alellsdqlh egakaldvgs
      121 gsgiltacfs rmvgpkgqvv gidhikelvd dsinnvkkdd ptllssgrvk livgdgrmgy
      181 aeeapydaih vgaaapvvpq alidqlkpgg rlilpvgpag gnqmleqydk ledgsvkmkp
      241 lmgviyvplt dkekqwsrwk
//
LOCUS       XP_041325738             688 aa            linear   VRT 06-MAY-2021
DEFINITION  HBS1-like protein isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325738
VERSION     XP_041325738.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469804.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="HBS1-like protein isoform X1"
                     /calculated_mol_wt=75615
     Region          53..134
                     /region_name="HBS1_N"
                     /note="HBS1 N-terminus; pfam08938"
                     /db_xref="CDD:462642"
     Region          265..688
                     /region_name="TEF1"
                     /note="Translation elongation factor EF-1alpha (GTPase)
                     [Translation, ribosomal structure and biogenesis];
                     COG5256"
                     /db_xref="CDD:444074"
     CDS             1..688
                     /gene="HBS1L"
                     /coded_by="XM_041469804.1:116..2182"
                     /db_xref="GeneID:121354835"
ORIGIN      
        1 msrhrnvrgy nydedfeddd vygqsveddy cispstaaqf iysrrdkpat faepleeeyg
       61 cegtdaaaad cftpthqlte vdrarlnscl dqmrevlaes ipeqtmvqav ldtkfdvqka
      121 ldlvlsqgck qnvktknkda vilakttkgk trdsqsarme seivpkiakm tvsgkkqsmg
      181 fevpcviaee nghtntpqkg llpedasvas galeavskst pspqvvqvse eqnmvptpsk
      241 ksskakpqid vkaelekrqg gkqllnlvvi ghvdagkstl mghllyllgn vnkrtmhkye
      301 qeskkagkas fayawvldet geerergvtm dvgmtkfetp tkvitlmdap ghkdfipnmi
      361 tgaaqadvai lvvdasrgef eagfetggqt rehgllvrsl gvtqlavavn kmdqvswqqe
      421 rfqeitsklg qflkqagfke sdvayiptsg lggenlvtrg qssdltqwyk gkclleqids
      481 fkppqrsvdk pfrlcvadvf kdqgsgfcvt gkieagyiqv gerllamppn etctakgitl
      541 hdepvdwaaa gdhvsltltg mdiikinvgc vfcdpkepik vctrfraril ifnieipitk
      601 gfpvllhyqt vsepatitrl lsvlhkstge vikkkpkfla kgqnalielq tqrpvalely
      661 kdfkelgrfm lrysgstiaa gvvteike
//
LOCUS       XP_041325739             666 aa            linear   VRT 06-MAY-2021
DEFINITION  HBS1-like protein isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325739
VERSION     XP_041325739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..666
                     /product="HBS1-like protein isoform X2"
                     /calculated_mol_wt=73133
     Region          31..112
                     /region_name="HBS1_N"
                     /note="HBS1 N-terminus; pfam08938"
                     /db_xref="CDD:462642"
     Region          243..666
                     /region_name="TEF1"
                     /note="Translation elongation factor EF-1alpha (GTPase)
                     [Translation, ribosomal structure and biogenesis];
                     COG5256"
                     /db_xref="CDD:444074"
     CDS             1..666
                     /gene="HBS1L"
                     /coded_by="XM_041469805.1:109..2109"
                     /db_xref="GeneID:121354835"
ORIGIN      
        1 msrhrnvrgy nydeaaqfiy srrdkpatfa epleeeygce gtdaaaadcf tpthqltevd
       61 rarlnscldq mrevlaesip eqtmvqavld tkfdvqkald lvlsqgckqn vktknkdavi
      121 lakttkgktr dsqsarmese ivpkiakmtv sgkkqsmgfe vpcviaeeng htntpqkgll
      181 pedasvasga leavskstps pqvvqvseeq nmvptpskks skakpqidvk aelekrqggk
      241 qllnlvvigh vdagkstlmg hllyllgnvn krtmhkyeqe skkagkasfa yawvldetge
      301 erergvtmdv gmtkfetptk vitlmdapgh kdfipnmitg aaqadvailv vdasrgefea
      361 gfetggqtre hgllvrslgv tqlavavnkm dqvswqqerf qeitsklgqf lkqagfkesd
      421 vayiptsglg genlvtrgqs sdltqwykgk clleqidsfk ppqrsvdkpf rlcvadvfkd
      481 qgsgfcvtgk ieagyiqvge rllamppnet ctakgitlhd epvdwaaagd hvsltltgmd
      541 iikinvgcvf cdpkepikvc trfrarilif nieipitkgf pvllhyqtvs epatitrlls
      601 vlhkstgevi kkkpkflakg qnalielqtq rpvalelykd fkelgrfmlr ysgstiaagv
      661 vteike
//
LOCUS       XP_041325740             617 aa            linear   VRT 06-MAY-2021
DEFINITION  HBS1-like protein isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325740
VERSION     XP_041325740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..617
                     /product="HBS1-like protein isoform X3"
                     /calculated_mol_wt=67584
     Region          53..134
                     /region_name="HBS1_N"
                     /note="HBS1 N-terminus; pfam08938"
                     /db_xref="CDD:462642"
     CDS             1..617
                     /gene="HBS1L"
                     /coded_by="XM_041469806.1:116..1969"
                     /db_xref="GeneID:121354835"
ORIGIN      
        1 msrhrnvrgy nydedfeddd vygqsveddy cispstaaqf iysrrdkpat faepleeeyg
       61 cegtdaaaad cftpthqlte vdrarlnscl dqmrevlaes ipeqtmvqav ldtkfdvqka
      121 ldlvlsqgck qnvktknkda vilakttkgd lrccpemcvd adsfscavds fadktnkpgf
      181 gnltaksdsa lyslttnfek snipscerkg lkssslvpss afsddlckgs fcaplnkqae
      241 kqlpesanav slvpdsqdvf ssigsnplkc ketqdlksll mqnvvcdsls pdcnsnahfy
      301 sppclasalg nlvldnevsh tinkknelle nlssleqsrk qeslssdmaa lpvlrsgsts
      361 ladllqehqe ssashcysla dlytqstanl tdrrlgassl sqlvnqpqts ggmpeltgsl
      421 sslahsevcp vkevenlsls dliaetieid ktqqrmdlpm hnvielrpsq gtnidlsvlv
      481 knadvsteks vvrqsnifsp etklvkekqg kcsgfaktnr kpkkghglkr qdlslswika
      541 lrarpsafal tlclryppkg ykrctvgihk tflysrqvqd vkpketgpti aitpfdfksa
      601 spddivkanq rkaftrq
//
LOCUS       XP_041325741             551 aa            linear   VRT 06-MAY-2021
DEFINITION  HBS1-like protein isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325741
VERSION     XP_041325741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469807.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="HBS1-like protein isoform X4"
                     /calculated_mol_wt=60229
     Region          128..551
                     /region_name="TEF1"
                     /note="Translation elongation factor EF-1alpha (GTPase)
                     [Translation, ribosomal structure and biogenesis];
                     COG5256"
                     /db_xref="CDD:444074"
     CDS             1..551
                     /gene="HBS1L"
                     /coded_by="XM_041469807.1:170..1825"
                     /db_xref="GeneID:121354835"
ORIGIN      
        1 markfsqedv sgktrdsqsa rmeseivpki akmtvsgkkq smgfevpcvi aeenghtntp
       61 qkgllpedas vasgaleavs kstpspqvvq vseeqnmvpt pskksskakp qidvkaelek
      121 rqggkqllnl vvighvdagk stlmghllyl lgnvnkrtmh kyeqeskkag kasfayawvl
      181 detgeererg vtmdvgmtkf etptkvitlm dapghkdfip nmitgaaqad vailvvdasr
      241 gefeagfetg gqtrehgllv rslgvtqlav avnkmdqvsw qqerfqeits klgqflkqag
      301 fkesdvayip tsglggenlv trgqssdltq wykgkclleq idsfkppqrs vdkpfrlcva
      361 dvfkdqgsgf cvtgkieagy iqvgerllam ppnetctakg itlhdepvdw aaagdhvslt
      421 ltgmdiikin vgcvfcdpke pikvctrfra rilifnieip itkgfpvllh yqtvsepati
      481 trllsvlhks tgevikkkpk flakgqnali elqtqrpval elykdfkelg rfmlrysgst
      541 iaagvvteik e
//
LOCUS       XP_041325742             530 aa            linear   VRT 06-MAY-2021
DEFINITION  HBS1-like protein isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325742
VERSION     XP_041325742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..530
                     /product="HBS1-like protein isoform X5"
                     /calculated_mol_wt=57862
     Region          107..530
                     /region_name="TEF1"
                     /note="Translation elongation factor EF-1alpha (GTPase)
                     [Translation, ribosomal structure and biogenesis];
                     COG5256"
                     /db_xref="CDD:444074"
     CDS             1..530
                     /gene="HBS1L"
                     /coded_by="XM_041469808.1:173..1765"
                     /db_xref="GeneID:121354835"
ORIGIN      
        1 meseivpkia kmtvsgkkqs mgfevpcvia eenghtntpq kgllpedasv asgaleavsk
       61 stpspqvvqv seeqnmvptp skksskakpq idvkaelekr qggkqllnlv vighvdagks
      121 tlmghllyll gnvnkrtmhk yeqeskkagk asfayawvld etgeerergv tmdvgmtkfe
      181 tptkvitlmd apghkdfipn mitgaaqadv ailvvdasrg efeagfetgg qtrehgllvr
      241 slgvtqlava vnkmdqvswq qerfqeitsk lgqflkqagf kesdvayipt sglggenlvt
      301 rgqssdltqw ykgkclleqi dsfkppqrsv dkpfrlcvad vfkdqgsgfc vtgkieagyi
      361 qvgerllamp pnetctakgi tlhdepvdwa aagdhvsltl tgmdiikinv gcvfcdpkep
      421 ikvctrfrar ilifnieipi tkgfpvllhy qtvsepatit rllsvlhkst gevikkkpkf
      481 lakgqnalie lqtqrpvale lykdfkelgr fmlrysgsti aagvvteike
//
LOCUS       XP_041325743             306 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein VTA1 homolog isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325743
VERSION     XP_041325743.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469809.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..306
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..306
                     /product="vacuolar protein sorting-associated protein VTA1
                     homolog isoform X1"
                     /calculated_mol_wt=33525
     Region          21..151
                     /region_name="Vta1"
                     /note="Vta1 like; pfam04652"
                     /db_xref="CDD:461380"
     Region          265..301
                     /region_name="Vta1_C"
                     /note="Vta1 C-terminal domain; pfam18097"
                     /db_xref="CDD:465647"
     CDS             1..306
                     /gene="VTA1"
                     /coded_by="XM_041469809.1:82..1002"
                     /db_xref="GeneID:121354837"
ORIGIN      
        1 maapalpplp pqlksiqhhl rtaqeldkre pvvayycrly amqtgmkids ktpecrkfls
       61 klmdqleamk kqfgdneait qeivgsahve nyalkmflya dnedragqfh knmiksfyta
      121 sllidvltvf gelseenaqh rkyarwkaay ihnclknget pqpgpigmeg esfadaeree
      181 agsssvhsgt apsssstyea nniptsnytg ihippgahap antpaevphn tgvtsntiqp
      241 apqniplvdp slysaqsage vrltpedfar aqkyckyags alqyedvsta vqnlqkalkl
      301 litgre
//
LOCUS       XP_041325744             305 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein VTA1 homolog isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325744
VERSION     XP_041325744.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469810.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="vacuolar protein sorting-associated protein VTA1
                     homolog isoform X2"
                     /calculated_mol_wt=33454
     Region          21..151
                     /region_name="Vta1"
                     /note="Vta1 like; pfam04652"
                     /db_xref="CDD:461380"
     Region          264..300
                     /region_name="Vta1_C"
                     /note="Vta1 C-terminal domain; pfam18097"
                     /db_xref="CDD:465647"
     CDS             1..305
                     /gene="VTA1"
                     /coded_by="XM_041469810.1:82..999"
                     /db_xref="GeneID:121354837"
ORIGIN      
        1 maapalpplp pqlksiqhhl rtaqeldkre pvvayycrly amqtgmkids ktpecrkfls
       61 klmdqleamk kqfgdneait qeivgsahve nyalkmflya dnedragqfh knmiksfyta
      121 sllidvltvf gelseenaqh rkyarwkaay ihnclknget pqpgpigmeg esfdaereea
      181 gsssvhsgta psssstyean niptsnytgi hippgahapa ntpaevphnt gvtsntiqpa
      241 pqniplvdps lysaqsagev rltpedfara qkyckyagsa lqyedvstav qnlqkalkll
      301 itgre
//
LOCUS       XP_041325746             485 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase Sgk1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325746
VERSION     XP_041325746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..485
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..485
                     /product="serine/threonine-protein kinase Sgk1 isoform X1"
                     /calculated_mol_wt=53820
     Region          156..478
                     /region_name="STKc_SGK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Serum- and Glucocorticoid-induced Kinase; cd05575"
                     /db_xref="CDD:270727"
     Site            order(158..159,161..164,166,179,181,214,231,233,237,239,
                     276,278,280..281,283,293..294,297,311..316,343,349,352)
                     /site_type="active"
                     /db_xref="CDD:270727"
     Site            order(158..159,161..164,166,179,181,214,231,233,278,
                     280..281,283,293)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270727"
     Site            order(162,237,239,276,278,280,297,311..316,343,349,352)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270727"
     Site            293..316
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270727"
     Site            451
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270727"
     Site            472..477
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270727"
     CDS             1..485
                     /gene="SGK1"
                     /coded_by="XM_041469812.1:278..1735"
                     /db_xref="GeneID:121354838"
ORIGIN      
        1 msaaldsasi kgsagapagl aalaasllpa grparkgsys gsqqrpgaga qaqpprrraa
       61 lgvpagskmr gkeeksslka fmkqrrmgln dfiqkiatns yackhpevqs ilkisqpqep
      121 elmnanpspp pspsqqinlg pssnphakps dfhflkvigk gsfgkvllar hkaeeqfyav
      181 kvlqkkailk kkeekhimse rnvllknvkh pflvglhfsf qtadklyfvl dyinggelfy
      241 hlqrercfle prarfyaaei asalgylhsl nivyrdlkpe nilldsqghi vltdfglcke
      301 niehngttst fcgtpeylap evlhkqpydr tvdwwclgav lyemlyglpp fysrntaemy
      361 dnilnkplql kpnitnsarh llegllqkdr tkrlgakedf meiknhiffs pinwddlink
      421 kitppfnpnv sgpsdlrhfd peftdepvpn sigqspdsil itasvkeaae aflgfsyapp
      481 vdsfl
//
LOCUS       XP_041325747             432 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase Sgk1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325747
VERSION     XP_041325747.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469813.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="serine/threonine-protein kinase Sgk1 isoform X2"
                     /calculated_mol_wt=48819
     Region          103..425
                     /region_name="STKc_SGK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Serum- and Glucocorticoid-induced Kinase; cd05575"
                     /db_xref="CDD:270727"
     Site            order(105..106,108..111,113,126,128,161,178,180,184,186,
                     223,225,227..228,230,240..241,244,258..263,290,296,299)
                     /site_type="active"
                     /db_xref="CDD:270727"
     Site            order(105..106,108..111,113,126,128,161,178,180,225,
                     227..228,230,240)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270727"
     Site            order(109,184,186,223,225,227,244,258..263,290,296,299)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270727"
     Site            240..263
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270727"
     Site            398
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270727"
     Site            419..424
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270727"
     CDS             1..432
                     /gene="SGK1"
                     /coded_by="XM_041469813.1:145..1443"
                     /db_xref="GeneID:121354838"
ORIGIN      
        1 mtvkaaeasg ptltyskmrg mvailiafmk qrrmglndfi qkiatnsyac khpevqsilk
       61 isqpqepelm nanpspppsp sqqinlgpss nphakpsdfh flkvigkgsf gkvllarhka
      121 eeqfyavkvl qkkailkkke ekhimsernv llknvkhpfl vglhfsfqta dklyfvldyi
      181 nggelfyhlq rercflepra rfyaaeiasa lgylhslniv yrdlkpenil ldsqghivlt
      241 dfglckenie hngttstfcg tpeylapevl hkqpydrtvd wwclgavlye mlyglppfys
      301 rntaemydni lnkplqlkpn itnsarhlle gllqkdrtkr lgakedfmei knhiffspin
      361 wddlinkkit ppfnpnvsgp sdlrhfdpef tdepvpnsig qspdsilita svkeaaeafl
      421 gfsyappvds fl
//
LOCUS       XP_041325748             495 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC14 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325748
VERSION     XP_041325748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="palmitoyltransferase ZDHHC14 isoform X1"
                     /calculated_mol_wt=53972
     Region          170..293
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     Region          <377..492
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..495
                     /gene="ZDHHC14"
                     /coded_by="XM_041469814.1:605..2092"
                     /db_xref="GeneID:121354839"
ORIGIN      
        1 mtpgggsgpm kdceysqist hsssspmesp hkkkksvpkr kwevfpgrnk ffcngrimma
       61 rqtgvfyltl vlilvtsglf fafdcpylse kitpaipaig gilfffvmgt llrtsfsdpg
      121 vlpratpdea adlerqignt ediangcssg gyrppprtke viingqtvkl kycftckifr
      181 pprashcslc dncverfdhh cpwvgncvgk rnyrffymfi lslsfltvfi fafvithvil
      241 rsqqtgflna lkdspasvle avvcffsvws ivglsgfhty lissnqttne dikgswsnkr
      301 gkenynpysy gniftnccaa lcgplspsli drrgfiqpdt pqlagpsngi tmygatqsqs
      361 nmcdqdqciq stkfvlqaaa tpllqsepsi tseelplpgk tslsgpcatl tlgqptppss
      421 mpnltsdsgl tdiiplkeeh eghqfltpee apsppgmlps gspiahsrtm hvlslasqds
      481 lhedsvrglv klssv
//
LOCUS       XP_041325749             495 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC14 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325749
VERSION     XP_041325749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="palmitoyltransferase ZDHHC14 isoform X1"
                     /calculated_mol_wt=53972
     Region          170..293
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     Region          <377..492
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..495
                     /gene="ZDHHC14"
                     /coded_by="XM_041469815.1:668..2155"
                     /db_xref="GeneID:121354839"
ORIGIN      
        1 mtpgggsgpm kdceysqist hsssspmesp hkkkksvpkr kwevfpgrnk ffcngrimma
       61 rqtgvfyltl vlilvtsglf fafdcpylse kitpaipaig gilfffvmgt llrtsfsdpg
      121 vlpratpdea adlerqignt ediangcssg gyrppprtke viingqtvkl kycftckifr
      181 pprashcslc dncverfdhh cpwvgncvgk rnyrffymfi lslsfltvfi fafvithvil
      241 rsqqtgflna lkdspasvle avvcffsvws ivglsgfhty lissnqttne dikgswsnkr
      301 gkenynpysy gniftnccaa lcgplspsli drrgfiqpdt pqlagpsngi tmygatqsqs
      361 nmcdqdqciq stkfvlqaaa tpllqsepsi tseelplpgk tslsgpcatl tlgqptppss
      421 mpnltsdsgl tdiiplkeeh eghqfltpee apsppgmlps gspiahsrtm hvlslasqds
      481 lhedsvrglv klssv
//
LOCUS       XP_041325750             495 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC14 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325750
VERSION     XP_041325750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="palmitoyltransferase ZDHHC14 isoform X1"
                     /calculated_mol_wt=53972
     Region          170..293
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     Region          <377..492
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..495
                     /gene="ZDHHC14"
                     /coded_by="XM_041469816.1:409..1896"
                     /db_xref="GeneID:121354839"
ORIGIN      
        1 mtpgggsgpm kdceysqist hsssspmesp hkkkksvpkr kwevfpgrnk ffcngrimma
       61 rqtgvfyltl vlilvtsglf fafdcpylse kitpaipaig gilfffvmgt llrtsfsdpg
      121 vlpratpdea adlerqignt ediangcssg gyrppprtke viingqtvkl kycftckifr
      181 pprashcslc dncverfdhh cpwvgncvgk rnyrffymfi lslsfltvfi fafvithvil
      241 rsqqtgflna lkdspasvle avvcffsvws ivglsgfhty lissnqttne dikgswsnkr
      301 gkenynpysy gniftnccaa lcgplspsli drrgfiqpdt pqlagpsngi tmygatqsqs
      361 nmcdqdqciq stkfvlqaaa tpllqsepsi tseelplpgk tslsgpcatl tlgqptppss
      421 mpnltsdsgl tdiiplkeeh eghqfltpee apsppgmlps gspiahsrtm hvlslasqds
      481 lhedsvrglv klssv
//
LOCUS       XP_041325751             491 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC14 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325751
VERSION     XP_041325751.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469817.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..491
                     /product="palmitoyltransferase ZDHHC14 isoform X2"
                     /calculated_mol_wt=53571
     Region          166..289
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     Region          <373..488
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..491
                     /gene="ZDHHC14"
                     /coded_by="XM_041469817.1:605..2080"
                     /db_xref="GeneID:121354839"
ORIGIN      
        1 mtpgggsgpm kdceysqist hsssspmesp hkkkksvpkr kwevfpgrnk ffcngrimma
       61 rqtgvfyltl vlilvtsglf fafdcpylse kitpaipaig gilfffvmgt llrtsfsdpg
      121 vlpratpdea adlerqidia ngcssggyrp pprtkeviin gqtvklkycf tckifrppra
      181 shcslcdncv erfdhhcpwv gncvgkrnyr ffymfilsls fltvfifafv ithvilrsqq
      241 tgflnalkds pasvleavvc ffsvwsivgl sgfhtyliss nqttnedikg swsnkrgken
      301 ynpysygnif tnccaalcgp lspslidrrg fiqpdtpqla gpsngitmyg atqsqsnmcd
      361 qdqciqstkf vlqaaatpll qsepsitsee lplpgktsls gpcatltlgq ptppssmpnl
      421 tsdsgltdii plkeeheghq fltpeeapsp pgmlpsgspi ahsrtmhvls lasqdslhed
      481 svrglvklss v
//
LOCUS       XP_041325752             480 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC14 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325752
VERSION     XP_041325752.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469818.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..480
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..480
                     /product="palmitoyltransferase ZDHHC14 isoform X3"
                     /calculated_mol_wt=52234
     Region          170..293
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     Region          <320..477
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..480
                     /gene="ZDHHC14"
                     /coded_by="XM_041469818.1:605..2047"
                     /db_xref="GeneID:121354839"
ORIGIN      
        1 mtpgggsgpm kdceysqist hsssspmesp hkkkksvpkr kwevfpgrnk ffcngrimma
       61 rqtgvfyltl vlilvtsglf fafdcpylse kitpaipaig gilfffvmgt llrtsfsdpg
      121 vlpratpdea adlerqignt ediangcssg gyrppprtke viingqtvkl kycftckifr
      181 pprashcslc dncverfdhh cpwvgncvgk rnyrffymfi lslsfltvfi fafvithvil
      241 rsqqtgflna lkdspasvle avvcffsvws ivglsgfhty lissnqttne dikgswsnkr
      301 gkenynpysy gniftnccaa lcgplspsli drrgfiqpdt pqlagpsngi tmygatqsqs
      361 nmaaatpllq sepsitseel plpgktslsg pcatltlgqp tppssmpnlt sdsgltdiip
      421 lkeeheghqf ltpeeapspp gmlpsgspia hsrtmhvlsl asqdslheds vrglvklssv
//
LOCUS       XP_041325753             476 aa            linear   VRT 06-MAY-2021
DEFINITION  palmitoyltransferase ZDHHC14 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325753
VERSION     XP_041325753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="palmitoyltransferase ZDHHC14 isoform X4"
                     /calculated_mol_wt=51833
     Region          166..289
                     /region_name="DHHC"
                     /note="DHHC palmitoyltransferase; pfam01529"
                     /db_xref="CDD:396215"
     Region          <316..473
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     CDS             1..476
                     /gene="ZDHHC14"
                     /coded_by="XM_041469819.1:605..2035"
                     /db_xref="GeneID:121354839"
ORIGIN      
        1 mtpgggsgpm kdceysqist hsssspmesp hkkkksvpkr kwevfpgrnk ffcngrimma
       61 rqtgvfyltl vlilvtsglf fafdcpylse kitpaipaig gilfffvmgt llrtsfsdpg
      121 vlpratpdea adlerqidia ngcssggyrp pprtkeviin gqtvklkycf tckifrppra
      181 shcslcdncv erfdhhcpwv gncvgkrnyr ffymfilsls fltvfifafv ithvilrsqq
      241 tgflnalkds pasvleavvc ffsvwsivgl sgfhtyliss nqttnedikg swsnkrgken
      301 ynpysygnif tnccaalcgp lspslidrrg fiqpdtpqla gpsngitmyg atqsqsnmaa
      361 atpllqseps itseelplpg ktslsgpcat ltlgqptpps smpnltsdsg ltdiiplkee
      421 heghqfltpe eapsppgmlp sgspiahsrt mhvlslasqd slhedsvrgl vklssv
//
LOCUS       XP_041325754             718 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein KIAA0408 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041325754
VERSION     XP_041325754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469820.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..718
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..718
                     /product="uncharacterized protein KIAA0408 homolog"
                     /calculated_mol_wt=80946
     Region          24..155
                     /region_name="DUF4482"
                     /note="Domain of unknown function (DUF4482); pfam14818"
                     /db_xref="CDD:464333"
     CDS             1..718
                     /gene="KIAA0408"
                     /coded_by="XM_041469820.1:231..2387"
                     /db_xref="GeneID:121354840"
ORIGIN      
        1 mkgnihgrkk krravfavvq tlamdlrgql enterswnke kmellerfdn erkewecqwk
       61 vmqkkieely qevklrresn mtvhdskaiq sklqlsmhsp tlqetdtakl hhqhnvandr
      121 mekgsllgit ghewkeprdt srnnillvdn lafenhkkpe dsltiktseq ntknyigdln
      181 valkelarvs eelcsyqeei rkksnhrrmk slpflgefee tqntvilpem nhvssnesqt
      241 svafeteehn nrknlmsstk alkdisygsl tggigtdfsp wqkkeappvp prstsrhltn
      301 slsaviqlse apirdpdiks nckaqgcwng gklrnpspvn knksavasan egqavkvpvm
      361 vtaaipvtkn ecnvptnfch ntwaydmgkl gkdnknepsp lsaqkscsdg nmaqsnkmhq
      421 kqntkshssp fysndfyapa tshndlledt rhplgktqrn etlaakidef nrtvfhtdkr
      481 nnalqenqvp ptasedhkpc vtlcdsatsr aetvntscas npklsatkeq etnnpskavr
      541 tagqqkhmng lpntsgyrhm lhehdwrpsn lsgrprsads rsnygvvekl lktyekstat
      601 spcnakcckd krtqanseft nggcetlsqy lemlqieqek qefprnsarh igqqlkqgke
      661 rqklpeicvp vkcssekgfs rparpanrrl psrwasrsps appavrravy nsvsfrpq
//
LOCUS       XP_041325755             596 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SOGA3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325755
VERSION     XP_041325755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="protein SOGA3"
                     /calculated_mol_wt=69424
     Region          <16..364
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          170..264
                     /region_name="SOGA"
                     /note="Protein SOGA; pfam11365"
                     /db_xref="CDD:463264"
     Region          290..378
                     /region_name="SOGA"
                     /note="Protein SOGA; pfam11365"
                     /db_xref="CDD:463264"
     CDS             1..596
                     /gene="SOGA3"
                     /coded_by="XM_041469821.1:4..1794"
                     /db_xref="GeneID:121354842"
ORIGIN      
        1 mqeemeklre eneslkneid elrtemdemr dsffeedacq lqemrheler ankncrilqy
       61 rlrkaerkrl ryaqtgeidn elirsmeqdl kvakdvsvrl hhelenveek rtitedenek
      121 lrqqlievei akqalqnele kmkeqslkrr gskdppklek ksqqtptedd nedlkcqlqf
      181 vkeeaalmrk kmakidkekd rfehelqkyr sfygdldspl pkgeaggppt treaelklrl
      241 rlveeeanil grkiveleve nrglkaeldd lrgddfsgtt npllgeqnes lselrqhlql
      301 vedetellrr nvadleeqnk ritaelnkyk yksgahessr hhdnakteal qeelkaarmq
      361 inelsgkvmq lqyenrvlms nmqrydlash lgirgsprds daesdagkke sdddsrpphr
      421 kregpigges dseevrnirc ltptrsfypt psgwqksftd rqqmkdirse aerlgktidr
      481 lisdtstiit eariyvangd lfglmdeedd gsrirehell yrinaqmkaf rkelqafidr
      541 levpkssddr sadeplsvsq mfqpiillil ilvlfsslsy ttifklvflf tlffvl
//
LOCUS       XP_041325756             381 aa            linear   VRT 06-MAY-2021
DEFINITION  gap junction alpha-1 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325756
VERSION     XP_041325756.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469822.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="gap junction alpha-1 protein"
                     /calculated_mol_wt=42991
     Region          3..233
                     /region_name="Connexin"
                     /note="pfam00029"
                     /db_xref="CDD:459638"
     Region          282..360
                     /region_name="Connexin43"
                     /note="Gap junction alpha-1 protein (Cx43); pfam03508"
                     /db_xref="CDD:460950"
     CDS             1..381
                     /gene="GJA1"
                     /coded_by="XM_041469822.1:630..1775"
                     /db_xref="GeneID:121354843"
ORIGIN      
        1 mgdwsalgkl ldkvqaysta ggkvwlsvlf ifrilllgta vesawgdeqs afrcntqqpg
       61 cenvcydksf pishvrfwvl qiifvsvptl lylahvfyvm rkeeklnkre eelkvvandg
      121 vnvdmhlkqi eikkfkygie ehgkvkmrgg llrtyiisil fksvfevafl liqwyiygfs
      181 lnaiytcerd pcphrvdcfl srptektifi lfmlvvslvs lalniielfy vffkgvkdrv
      241 kgktdpyshs gamspskdcg spkyayyngc ssptaplspm sppgyklvtg drnnsscrny
      301 nkqaseqnwa nysaeqnrmg qagstisnsh aqpfdfsdeh qntkklasgh elqpltivdq
      361 rppsrassra ssrprpddle i
//
LOCUS       XP_041325757             381 aa            linear   VRT 06-MAY-2021
DEFINITION  gap junction alpha-1 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325757
VERSION     XP_041325757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="gap junction alpha-1 protein"
                     /calculated_mol_wt=42991
     Region          3..233
                     /region_name="Connexin"
                     /note="pfam00029"
                     /db_xref="CDD:459638"
     Region          282..360
                     /region_name="Connexin43"
                     /note="Gap junction alpha-1 protein (Cx43); pfam03508"
                     /db_xref="CDD:460950"
     CDS             1..381
                     /gene="GJA1"
                     /coded_by="XM_041469823.1:627..1772"
                     /db_xref="GeneID:121354843"
ORIGIN      
        1 mgdwsalgkl ldkvqaysta ggkvwlsvlf ifrilllgta vesawgdeqs afrcntqqpg
       61 cenvcydksf pishvrfwvl qiifvsvptl lylahvfyvm rkeeklnkre eelkvvandg
      121 vnvdmhlkqi eikkfkygie ehgkvkmrgg llrtyiisil fksvfevafl liqwyiygfs
      181 lnaiytcerd pcphrvdcfl srptektifi lfmlvvslvs lalniielfy vffkgvkdrv
      241 kgktdpyshs gamspskdcg spkyayyngc ssptaplspm sppgyklvtg drnnsscrny
      301 nkqaseqnwa nysaeqnrmg qagstisnsh aqpfdfsdeh qntkklasgh elqpltivdq
      361 rppsrassra ssrprpddle i
//
LOCUS       XP_041325758             445 aa            linear   VRT 06-MAY-2021
DEFINITION  probable E3 ubiquitin-protein ligase RNF217 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325758
VERSION     XP_041325758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="probable E3 ubiquitin-protein ligase RNF217"
                     /calculated_mol_wt=49127
     Region          7..>123
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          164..212
                     /region_name="vRING-HC-C4C4_RBR_RNF217"
                     /note="Variant RING finger, HC subclass (C4C4-type), found
                     in RING finger protein 217 (RNF217) and similar proteins;
                     cd16622"
                     /db_xref="CDD:438284"
     Region          241..315
                     /region_name="BRcat_RBR_RNF217"
                     /note="BRcat domain found in RING finger protein 217
                     (RNF217); cd20342"
                     /db_xref="CDD:439003"
     Region          319..386
                     /region_name="Rcat_RBR_RNF217"
                     /note="Rcat domain found in RING finger protein 217
                     (RNF217); cd20350"
                     /db_xref="CDD:439011"
     Site            order(326,329,344,347,352,355,368,377)
                     /site_type="other"
                     /note="Zn binding site [ion binding]"
                     /db_xref="CDD:439011"
     CDS             1..445
                     /gene="RNF217"
                     /coded_by="XM_041469824.1:73..1410"
                     /db_xref="GeneID:121354844"
ORIGIN      
        1 mgeqqsslst pradaappsp vgdprepgpd eppspreavp gaagperrga eeeaeaaagp
       61 eqppgsgepa apaeegpegg sgrrrpprrh vyctvycven drpvaapgsp rggpgvgqpp
      121 arrgvvsgdd plssggsiev vdlyllpepf sgliagefgp llvlscrvcl eekpikplsc
      181 ckkavceecl rrylssqvql gqadikcpit ecsehldett vlynlphddi ikykyflels
      241 ridsstkpcp qckhfttfrr rghiptpakl enkykiqcps cqfvwcfkch spwhegvnck
      301 eykkgdkllr hwaneiehgq rnaqkcpkck ihiqrtegcd hmtcsqcntn fcyrcgeryr
      361 qlrffgdhts nlsifgckyr ylperphlrr lvrgsvcagk llitplilvl glalgavavv
      421 iglfvfpiyc lckkqrkrsr tgmpw
//
LOCUS       XP_041325760            1202 aa            linear   VRT 06-MAY-2021
DEFINITION  triadin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325760
VERSION     XP_041325760.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469826.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1202
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1202
                     /product="triadin isoform X1"
                     /calculated_mol_wt=135330
     Region          45..>78
                     /region_name="Asp-B-Hydro_N"
                     /note="Aspartyl beta-hydroxylase N-terminal region;
                     pfam05279"
                     /db_xref="CDD:428406"
     Region          <141..741
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          765..1014
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(854..857,911..912,938,940..941,1010..1011)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Region          <859..>928
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            912
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
     CDS             1..1202
                     /gene="TRDN"
                     /coded_by="XM_041469826.1:434..4042"
                     /db_xref="GeneID:121354845"
ORIGIN      
        1 maeitaeghm sttttiidgk ngsvpsssmk vgkksvtedl vttfsspaaw llvvalivtw
       61 savaivmfdl vdykdlagia tyaqhcddpc fppgrsvhkl steplriihe tleessdwiy
      121 gffsllsdiv wsddddsdeg evepslkkei qkqkmerpek rtpakahrdk pekqekierk
      181 eppkvtskdk lerqekpekk erhaavhkek pekpekqekk vlpkvtqkda perhekaekk
      241 pppkeekkvk stkveakvkk evkdgkgeak tttekvkqae tkttetglik aktkvkeeka
      301 lqtvtksdkk dqyafcryvi dmfaqgdfyp gaghkefapp rlllehsprk kpaaieerke
      361 ekkksdekks ttetkvkekt gkkekahekt avpeikkadk keaavskelk kpakapaanp
      421 tikkaaaagk ttkkeakvha avetptskag lekkeakatk aavqdkpkmk qgnpgkdkel
      481 kspaatkvke hakekegknp tslkekvitg psnvtkearl sppslqkrad slkgknpknp
      541 eslreketgk rkdvkpptal kekdsskrke ikastnpkek aavkkegekk atsenphehk
      601 hervkhekav sqnkpeekmk qqkttpteks aqakptkhet vkhekdvplt kpvkpkntak
      661 ptaeiptsat kkpktikeke ekktvkkqlk dektkvkedp rhqnltsgki raqnrlrslk
      721 vhksmgpdki qpwvlkelae evamplpnif ekswqsggvp tdwkrgniip ifkkgdkeea
      781 gydrsvsltp gsgkimerll letllrhkln nemignsqhg itkvkscltn flsfyhrvta
      841 vvdegratgi isldlnqgtv phdiyvskme rrgsdewatg wiknwlndha qsvevsgams
      901 kwkavpsgvp qgsvfglvlf nifigdmdsg fqctlseftd dtqmcdavnt legrnntqrd
      961 lvrlerwaqv ilmkfnnakc evlhlvwgsp knnfrlgrew keasagekdl gllvderldm
     1021 tqqcvlevkk avcilgcsks svastskevi lslysalvrp qleycvqdwe pehkkdvdml
     1081 eqvqkgvikl stglehisye drlremgqfs lekrrlrryl itvfqylqga ckrakeghft
     1141 tacsdrengf klkevgfsld irekvftvrv vrlwnrlpre vvdspslevf karlgrtlry
     1201 lv
//
LOCUS       XP_041325761            1181 aa            linear   VRT 06-MAY-2021
DEFINITION  triadin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325761
VERSION     XP_041325761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1181
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1181
                     /product="triadin isoform X2"
                     /calculated_mol_wt=133322
     Region          54..>87
                     /region_name="Asp-B-Hydro_N"
                     /note="Aspartyl beta-hydroxylase N-terminal region;
                     pfam05279"
                     /db_xref="CDD:428406"
     Region          <154..625
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          744..993
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(833..836,890..891,917,919..920,989..990)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Region          <838..>907
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            891
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
     CDS             1..1181
                     /gene="TRDN"
                     /coded_by="XM_041469827.1:29..3574"
                     /db_xref="GeneID:121354845"
ORIGIN      
        1 mqrmdavteg llvfssghms ttttiidgkn gsvpsssmkv gkksvtedlv ttfsspaawl
       61 lvvalivtws avaivmfdlv dykdlagiat yaqhcddpcf ppgrsvhkls teplriihet
      121 leessdwiyg ffsllsdivw sddddsdege vepslkkeiq kqkmerpekr tpakahrdkp
      181 ekqekierke ppkvtskdkl erqekpekke rhaavhkekp ekpekqekkv lpkvtqkdap
      241 erhekaekkp ppkeekkvks tkveakvkke vkdgkgeakt ttekvkqaet kttetglika
      301 ktkvkeekal qtvtksdkkd qyafcryvid mfaqgdfypg aghkefappr lllehsprkk
      361 paaieerkee kkksdekkst tetkvkektg kkekahekta vpeikkagkt tkkeakvhaa
      421 vetptskagl ekkeakatka avqdkpkmkq gnpgkdkelk spaatkvkeh akekegknpt
      481 slkekvitgp snvtkearls ppslqkrads lkgknpknpe slreketgkr kdvkpptalk
      541 ekdsskrkei kastnpkeka avkkegekka tsenphehkh ervkhekavs qnkpeekmkq
      601 qkttpteksa qakptkhetv khekdvpltk pvkpkntakp taeiptsatk kpktikekee
      661 kktvkkqlkd ektkvkedpr hqnltsgkir aqnrlrslkv hksmgpdkiq pwvlkelaee
      721 vamplpnife kswqsggvpt dwkrgniipi fkkgdkeeag ydrsvsltpg sgkimerlll
      781 etllrhklnn emignsqhgi tkvkscltnf lsfyhrvtav vdegratgii sldlnqgtvp
      841 hdiyvskmer rgsdewatgw iknwlndhaq svevsgamsk wkavpsgvpq gsvfglvlfn
      901 ifigdmdsgf qctlseftdd tqmcdavntl egrnntqrdl vrlerwaqvi lmkfnnakce
      961 vlhlvwgspk nnfrlgrewk easagekdlg llvderldmt qqcvlevkka vcilgcskss
     1021 vastskevil slysalvrpq leycvqdwep ehkkdvdmle qvqkgvikls tglehisyed
     1081 rlremgqfsl ekrrlrryli tvfqylqgac krakeghftt acsdrengfk lkevgfsldi
     1141 rekvftvrvv rlwnrlprev vdspslevfk arlgrtlryl v
//
LOCUS       XP_041325762            1180 aa            linear   VRT 06-MAY-2021
DEFINITION  triadin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325762
VERSION     XP_041325762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1180
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1180
                     /product="triadin isoform X3"
                     /calculated_mol_wt=133251
     Region          54..>87
                     /region_name="Asp-B-Hydro_N"
                     /note="Aspartyl beta-hydroxylase N-terminal region;
                     pfam05279"
                     /db_xref="CDD:428406"
     Region          <179..>623
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          743..992
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            order(832..835,889..890,916,918..919,988..989)
                     /site_type="active"
                     /db_xref="CDD:238185"
     Region          <837..>906
                     /region_name="ps-ssRNAv_RdRp-like"
                     /note="conserved catalytic core domain of RNA-dependent
                     RNA polymerase (RdRp) from the positive-sense
                     single-stranded RNA [(+)ssRNA] viruses and closely related
                     viruses; cl40470"
                     /db_xref="CDD:477363"
     Site            890
                     /site_type="other"
                     /note="nucleic acid binding site [nucleotide binding]"
                     /db_xref="CDD:238185"
     CDS             1..1180
                     /gene="TRDN"
                     /coded_by="XM_041469828.1:29..3571"
                     /db_xref="GeneID:121354845"
ORIGIN      
        1 mqrmdavteg llvfssghms ttttiidgkn gsvpsssmkv gkksvtedlv ttfsspaawl
       61 lvvalivtws avaivmfdlv dykdlagiat yaqhcddpcf ppgrsvhkls teplriihet
      121 leessdwiyg ffsllsdivw sddddsdege vepslkkeiq kqkmerpekr tpakahrdkp
      181 ekqekierke ppkvtskdkl erqekpekke rhaavhkekp ekpekqekkv lpkvtqkdap
      241 erhekaekkp ppkeekkvks tkveakvkke vkdgkgeakt ttekvkqaet kttetglika
      301 ktkvkeekal qtvtksdkkd qyafcryvid mfaqgdfypg aghkefappr lllehsprkk
      361 paaieerkee kkksdekkst tetkvkektg kkekahekta vpeikkagkt tkkeakvhav
      421 etptskagle kkeakatkaa vqdkpkmkqg npgkdkelks paatkvkeha kekegknpts
      481 lkekvitgps nvtkearlsp pslqkradsl kgknpknpes lreketgkrk dvkpptalke
      541 kdsskrkeik astnpkekaa vkkegekkat senphehkhe rvkhekavsq nkpeekmkqq
      601 kttpteksaq akptkhetvk hekdvpltkp vkpkntakpt aeiptsatkk pktikekeek
      661 ktvkkqlkde ktkvkedprh qnltsgkira qnrlrslkvh ksmgpdkiqp wvlkelaeev
      721 amplpnifek swqsggvptd wkrgniipif kkgdkeeagy drsvsltpgs gkimerllle
      781 tllrhklnne mignsqhgit kvkscltnfl sfyhrvtavv degratgiis ldlnqgtvph
      841 diyvskmerr gsdewatgwi knwlndhaqs vevsgamskw kavpsgvpqg svfglvlfni
      901 figdmdsgfq ctlseftddt qmcdavntle grnntqrdlv rlerwaqvil mkfnnakcev
      961 lhlvwgspkn nfrlgrewke asagekdlgl lvderldmtq qcvlevkkav cilgcskssv
     1021 astskevils lysalvrpql eycvqdwepe hkkdvdmleq vqkgviklst glehisyedr
     1081 lremgqfsle krrlrrylit vfqylqgack rakeghftta csdrengfkl kevgfsldir
     1141 ekvftvrvvr lwnrlprevv dspslevfka rlgrtlrylv
//
LOCUS       XP_041325763            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325763
VERSION     XP_041325763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469829.1:1293..8867"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325764            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325764
VERSION     XP_041325764.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469830.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469830.1:1231..8805"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325765            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325765
VERSION     XP_041325765.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469831.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469831.1:1355..8929"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325766            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325766
VERSION     XP_041325766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469832.1:1338..8912"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325767            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325767
VERSION     XP_041325767.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469833.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469833.1:1276..8850"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325769            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325769
VERSION     XP_041325769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469835.1:843..8417"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325770            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325770
VERSION     XP_041325770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469836.1:640..8214"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325771            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325771
VERSION     XP_041325771.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469837.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469837.1:1133..8707"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325772            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325772
VERSION     XP_041325772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469838.1:1257..8831"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325773            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325773
VERSION     XP_041325773.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469839.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469839.1:1195..8769"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325774            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325774
VERSION     XP_041325774.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469840.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469840.1:471..8045"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325775            2524 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor HIVEP2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325775
VERSION     XP_041325775.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469841.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2524
                     /product="transcription factor HIVEP2"
                     /calculated_mol_wt=279236
     Region          246..268
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          248..268
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          261..285
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          276..296
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          1874..1896
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          1876..1896
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Site            order(1881,1883,1885,1887..1888,1891..1892,1895,1909,
                     1911..1913,1915..1916,1920)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275370"
     Region          1888..1913
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          1904..1922
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275370"
     Region          <2111..2366
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     CDS             1..2524
                     /gene="HIVEP2"
                     /coded_by="XM_041469841.1:1178..8752"
                     /db_xref="GeneID:121354848"
ORIGIN      
        1 mpidycvess kekeksvtlq qpwkngsnkt lkstalgtlh vsaqlsseia lktlcnkmds
       61 gdtaigqkat srsgetakvp srwrqehsav ikmstfgsqe vqrqpqidhe qvgntasaql
      121 fssgklvssn eaaqqvtekq ypqhrpspys cqhslsfpqh slpqgflhni kphqslegpp
      181 wqfpshlqsv asedlfpfhm hshsggfsrk kisslnpays qysqksleqs edahkkehkp
      241 kkpgkyicpy cnracakpsv lkkhirshtg erpypcvpcg fsfktksnly khrkshahai
      301 kaglvpftes avskldldag yidveaeihs dgeqstdtde etsllvegsd klspvsqlpl
      361 diasrsgfhs smeeslvgpm kvpiliipks giqlpsessp yissdmlqtp slntksddsh
      421 tvkqrlalrl sekkgqdseq slnllsphsk gstdsgyfsr sesaeqqisp pntnaksyee
      481 iifgkfyrin qrtaltvata nqehslmgrk gktdpsplsn nrldikmlee hishlppnke
      541 elidsnnlst ikstqvypgs ntecrqsqtt ssiksesnly qvsqqgdvpv lleppvdssp
      601 lirsnsmpts sanslsipps lrgshsfdek mtgsddvfyp gtvgishqrm lrrqaafelp
      661 svqeghsdsd yhgrqgknii iassrqtagd kgpplkekkg dktfydydas gkhyrkweef
      721 eaqkqnyrds pslsgmnkgg effidalgqs qsvpsllgtt fenrkrrkee svgdeedspm
      781 icsstigtpg giqpldfdpk sqiqevprsg falqglenap hchaerfemc rpylqsgspa
      841 asledsslta eqektaeslv rkppgnvisv iqhtnslsrp nsferseste hiscqqekmy
      901 spsetcesei cespmspdra pqmenvdtsk pspsqqpqpc hiqprlvrqh niqvpeirvt
      961 eepdkpekdk evqskeqerp teefqwpqrs etlsqlpaek lppkkkrlrl admehssges
     1021 sfestgtsls rspsqesnls hsssfsmsfe reenmkfitp skqdefgkps efltvpagay
     1081 slsvpghhhq remrrcsseq mpcphaaeip eirsksfdyg nlshassagt ptvalspsre
     1141 rkkcflvrqa sfsgfpeisq tdqsteqsik qeqmehsqvg lrssqlvwhh spsavlqpiq
     1201 vddsgkqaig scaqlsnsss hlaqqqvlva dspemlrtpl iqqapyipnk hpseqqqlfa
     1261 hqekvpfppi hstlfqfpyp avcmvhlpps qqpilwqsct eplhfqhqfv qqlqksyvkq
     1321 afqidvppsy hlehapelig kkaadyvhak eqayqhysgt sgsyskntla kyqsdhsikp
     1381 tdtsseqhlq tdfdspsdgs vqslpgtvvp vriqthvpsy gsvmytsisq ilgqsnspai
     1441 vickvdetvs qrtlatnatm qgigfniaqm lghhggleky plwkvpqtlp lgleppiplc
     1501 lpstsdmast lggskrmlsp assldlfvet kqqkrvkeek mygqiveels aveltnsdik
     1561 kdfprmqkpq lvrqscatep keslpsmsss sslsssasqd fppvsmagad afplsrekls
     1621 sfdsaspgqk ssgpsegrds peeldvdeta sdmsmspqrs slppgeiqae dqlkhqklpl
     1681 gmlvqmssnt vgkvtastil ltdvadfqqi lqfpslrttt tvswcflnyt kpnytqqptl
     1741 kasvyaswci sscnpnpsgl stkttlallr skqkntteiy tlaamhrpga gkltsssawk
     1801 qfaqmkhepf flfgsklekk vvgniikerv kgdihgdkdi tskqtepiri kifeggyksn
     1861 edyvyvrgrg rgkyiceecg irckkpsmlk khirthtdvr pyvcklcnfa fktkgnltkh
     1921 mkskahmkkc lelgvsmtsv ddaeteeaen medmqqeaek ssnlaglsae hqfsdaeesd
     1981 gedgddnddd dededdfddt qgdstpktrs rstspqpprf sslsvnsaga sqgaspegsl
     2041 svghsslisy lvtlpsiqvt qlitpsdscd dtqmteyqrf fqskstdsep dkdrldipss
     2101 mdedytlsld psssprdlsp ssrqsspgyd sspyrdnspk rylmpkgdls prrhlsprrd
     2161 ispmrhlspr keavlrrels prrdvsprrh lsprrpmspg kdvsvrrdls prrerrymas
     2221 vraasprrgl yhnpalsmgq ylqsesipvg hsrrglsqap yfniygekgg mehrrsslfp
     2281 egpsdyvfsh lplhsqqqir apipmmpigg iqmvhsvpva lsglhspstl alqrevseek
     2341 qrgaaealtk epysiskhhe krtsphslhp aappsapssp llllaqstse dsvvatereq
     2401 eeniqtctka iaslriatee avlhgaeqlq rpsephqkpl esahfsikhf sgsepgqpca
     2461 sathpdlhgg eqdsfgtsqt apahptfysk sfvdvqqlgf hskseppsst qerkdpssek
     2521 skph
//
LOCUS       XP_041325776             224 aa            linear   VRT 06-MAY-2021
DEFINITION  superoxide dismutase [Mn], mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041325776
VERSION     XP_041325776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..224
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..224
                     /product="superoxide dismutase [Mn], mitochondrial"
                     /calculated_mol_wt=24747
     Region          29..218
                     /region_name="SodA"
                     /note="Superoxide dismutase [Inorganic ion transport and
                     metabolism]; COG0605"
                     /db_xref="CDD:440370"
     CDS             1..224
                     /gene="SOD2"
                     /coded_by="XM_041469842.1:129..803"
                     /db_xref="GeneID:121354849"
ORIGIN      
        1 mlcrfaaasr ssakliaplg clvsrqkhtl pdlpydyaal ephinaeimq lhhskhhaty
       61 vnnlnvveek ykeavakgdv ttqvslqpal kfnggghinh sifwtnlspn gggepkgelm
      121 eaikrdfgsf anfkekltav svgvqgsgwg wlgynkeqgr lqiaacanqd plqgttglip
      181 llgidvweha yylqyknvrp dylkaiwnvi nwenvssrya tskk
//
LOCUS       XP_041325777             555 aa            linear   VRT 06-MAY-2021
DEFINITION  connector enhancer of kinase suppressor of ras 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325777
VERSION     XP_041325777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..555
                     /product="connector enhancer of kinase suppressor of ras
                     3"
                     /calculated_mol_wt=61609
     Region          4..72
                     /region_name="SAM_CNK1,2,3-suppressor"
                     /note="SAM domain of CNK1,2,3-suppressor subfamily;
                     cd09511"
                     /db_xref="CDD:188910"
     Site            order(20,45,49,54..61,63..64,67)
                     /site_type="other"
                     /note="heterodimer interface EH [polypeptide binding]"
                     /db_xref="CDD:188910"
     Region          80..172
                     /region_name="CRIC_ras_sig"
                     /note="Connector enhancer of kinase suppressor of ras;
                     pfam10534"
                     /db_xref="CDD:463138"
     Region          210..290
                     /region_name="PDZ_CNK1_2_3-like"
                     /note="PDZ domain of connector enhancer of kinase
                     suppressor of ras 1 (CNK1), CNK2, CNK3, and related
                     domains; cd06748"
                     /db_xref="CDD:467230"
     Site            order(222..228,238,241,271,275,278..279)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467230"
     Region          332..544
                     /region_name="CNK2_3_dom"
                     /note="Connector enhancer of kinase suppressor of ras 2/3
                     domain; pfam06663"
                     /db_xref="CDD:461979"
     CDS             1..555
                     /gene="CNKSR3"
                     /coded_by="XM_041469843.1:112..1779"
                     /db_xref="GeneID:121354850"
ORIGIN      
        1 mepvtkwspk qvvdwtkgld dclqqyvhkf erekingeql lqishqdled lgisrighqe
       61 lvleavdllc alnygletdn mknlvlklrg ssnnlqnyis srrkssnydg ntsrkppnef
      121 ltsvveliga akallawldr tpftgiadfs smknriiqlc ldltttvqkd ctvadmedkv
      181 qtvaktlngi cdkairsttd plmsqcacle evhltnikpg eglgmyikst ydglhvitgt
      241 tenspadrsq kihagdeviq vnrqtvvgwq lknlvaklre npagvrlllk krptgsfhft
      301 paplknlrwk pplvqtnpsp astqspestv dtslkkekpa ildlyipppp avpysprdek
      361 gsfvygggsk rsqpllgskg aespnsfldq esrrrrftia dsdqlpgypm evnvlppkmr
      421 ektqsygkpr plsmpadgsw igaaepfsrp rgsgrkgedv lcryfsneri ppiieespst
      481 qhplcrpvsd kqlvrgtdyi rgsrcfmntd lhnsatipfq eegakktsvt sstksssaep
      541 sllvnwftrl kllth
//
LOCUS       XP_041325778             422 aa            linear   VRT 06-MAY-2021
DEFINITION  interactor protein for cytohesin exchange factors 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325778
VERSION     XP_041325778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469844.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="interactor protein for cytohesin exchange
                     factors 1 isoform X1"
                     /calculated_mol_wt=47526
     Region          18..131
                     /region_name="PH_CNK_mammalian-like"
                     /note="Connector enhancer of KSR (Kinase suppressor of
                     ras) (CNK) pleckstrin homology (PH) domain; cd01260"
                     /db_xref="CDD:269962"
     CDS             1..422
                     /gene="IPCEF1"
                     /coded_by="XM_041469844.1:89..1357"
                     /db_xref="GeneID:121354852"
ORIGIN      
        1 mttgcsfgln pcgffimsrr risckelgqa dcqgwlykkk ekgafignkw kkfwcvlkes
       61 slywyssqla ekaegfirlp dfsvdraiec kkkhaikish pqiktfyfaa envlemntwl
      121 sklgmavdpq apnrkneeec ysesehddpd itdtppppyt vqtppppsqd qqkssftstl
      181 sseascslss pestfnsqes sssltskvvc serqswldlv nssateegdq pltfcvqihs
      241 deapeavcad aaesqevrls epnggsqtsy lsadthclav sdatgqrsla rdqekcdddd
      301 emerlyksle qaslspigdr rlstkkelrk sfikrsknps ineklhkirm lnstlkckeh
      361 dlatinqlle dpkltavkyr ewrstnimlv qdiyqqqevq dmstenseeq emtprpvtes
      421 ai
//
LOCUS       XP_041325779             421 aa            linear   VRT 06-MAY-2021
DEFINITION  interactor protein for cytohesin exchange factors 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325779
VERSION     XP_041325779.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469845.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..421
                     /product="interactor protein for cytohesin exchange
                     factors 1 isoform X2"
                     /calculated_mol_wt=47398
     Region          18..131
                     /region_name="PH_CNK_mammalian-like"
                     /note="Connector enhancer of KSR (Kinase suppressor of
                     ras) (CNK) pleckstrin homology (PH) domain; cd01260"
                     /db_xref="CDD:269962"
     CDS             1..421
                     /gene="IPCEF1"
                     /coded_by="XM_041469845.1:89..1354"
                     /db_xref="GeneID:121354852"
ORIGIN      
        1 mttgcsfgln pcgffimsrr risckelgqa dcqgwlykkk ekgafignkw kkfwcvlkes
       61 slywyssqla ekaegfirlp dfsvdraiec kkkhaikish pqiktfyfaa envlemntwl
      121 sklgmavdpq apnrkneeec ysesehddpd itdtppppyt vqtppppsdq qkssftstls
      181 seascslssp estfnsqess ssltskvvcs erqswldlvn ssateegdqp ltfcvqihsd
      241 eapeavcada aesqevrlse pnggsqtsyl sadthclavs datgqrslar dqekcdddde
      301 merlyksleq aslspigdrr lstkkelrks fikrsknpsi neklhkirml nstlkckehd
      361 latinqlled pkltavkyre wrstnimlvq diyqqqevqd mstenseeqe mtprpvtesa
      421 i
//
LOCUS       XP_041325780             497 aa            linear   VRT 06-MAY-2021
DEFINITION  pantetheinase-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325780
VERSION     XP_041325780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="pantetheinase-like isoform X1"
                     /calculated_mol_wt=55140
     Region          26..328
                     /region_name="biotinidase_like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     cd07567"
                     /db_xref="CDD:143591"
     Site            order(80,179,183,186,212..213,215..216,238)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     Site            order(80,179,212)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     Site            order(180..183,185,192..194,213,215..219,222..223,
                     244..245,247..249,251..252,276..277,326..328)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143591"
     Region          342..488
                     /region_name="Vanin_C"
                     /note="Vanin C-terminal domain; pfam19018"
                     /db_xref="CDD:465946"
     CDS             1..497
                     /gene="LOC121354853"
                     /coded_by="XM_041469846.1:245..1738"
                     /db_xref="GeneID:121354853"
ORIGIN      
        1 mlpsqallpa vvlalaalqa lasdtfmaav yehavilphp seepvspsha lalmnknmdv
       61 legaikeaaq qgahiivtpe dgiygwrftr esiypyledi pdpvvnwipc tdpsrfgpap
      121 vqerlscmar nnsiyvvani gdkkpcdssd pncprdgryh yntdvvfdaq gklvaryhky
      181 nlflgetqfn ypkepeavtf etpfgkfgif tcfdilfyep avvlvskmqv dtvlfptawm
      241 nvlpfltaie fhsawamgmr vnvlaanthn tsmemtgsgi yapagarsys ynmktedghl
      301 liaeldahpr lspasppavs wnsyalsver fsqneheftg vvfedlftft eltkpggnlt
      361 vcqkdlcchl sykmaekrdd evyvlgafdg lhvfegqyyl qictllkcps tnlstcgqpv
      421 emaqtkfemf slsgtfgtsy vfpevlysgv qlapgefevl rdgrlkskhg tskplitatl
      481 fgrlyekdqp hplrisl
//
LOCUS       XP_041325782             497 aa            linear   VRT 06-MAY-2021
DEFINITION  vascular non-inflammatory molecule 2-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325782
VERSION     XP_041325782.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469848.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="vascular non-inflammatory molecule 2-like
                     isoform X2"
                     /calculated_mol_wt=55381
     Region          26..329
                     /region_name="biotinidase_like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     cd07567"
                     /db_xref="CDD:143591"
     Site            order(80,179,183,186,212..213,215..216,238)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     Site            order(80,179,212)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     Site            order(180..183,185,192..194,213,215..219,222..223,
                     244..245,247..249,251..252,276..277,326..329)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143591"
     Region          345..488
                     /region_name="Vanin_C"
                     /note="Vanin C-terminal domain; pfam19018"
                     /db_xref="CDD:465946"
     CDS             1..497
                     /gene="LOC121354853"
                     /coded_by="XM_041469848.1:246..1739"
                     /db_xref="GeneID:121354853"
ORIGIN      
        1 mlpsqallpa vvlalaalqa lasdtfmaav yehavilphp seepvspsha lalmnknmdv
       61 legaikeaaq qgahiivtpe dgiygwrftr esiypyledi pdpvvnwipc tdpsrfgpap
      121 vqerlscmar nnsiyvvani gdkkpcdssd pncprdgryh yntdvvfdtq gklvaryhky
      181 nlfrretqfn ypkepeavtf etpfgkfgif tcfdilfyep avvlvskmqv dtvlfptawm
      241 nvlpfltaie fhsawamgmg vnllsanthn tsmamtgsgl ftpegpaayh ydsateegrl
      301 llaelnahpr lsptyppain wslyatsike fpgendtfsg avrkdiftfr elrhkdgnyt
      361 vcqgdlcchl vyqmskerrd evyvlgafdg lhgslikyhw qictllkcps tnlstcgqpv
      421 emaqtkfemf slsgtfgtsy vfpevlysgv qlapgefevl rdgrlkskhg tskplitatl
      481 fgrlyekdqp hplrisl
//
LOCUS       XP_041325783             497 aa            linear   VRT 06-MAY-2021
DEFINITION  pantetheinase-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325783
VERSION     XP_041325783.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469849.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="pantetheinase-like isoform X1"
                     /calculated_mol_wt=55140
     Region          26..328
                     /region_name="biotinidase_like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     cd07567"
                     /db_xref="CDD:143591"
     Site            order(80,179,183,186,212..213,215..216,238)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     Site            order(80,179,212)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     Site            order(180..183,185,192..194,213,215..219,222..223,
                     244..245,247..249,251..252,276..277,326..328)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143591"
     Region          342..488
                     /region_name="Vanin_C"
                     /note="Vanin C-terminal domain; pfam19018"
                     /db_xref="CDD:465946"
     CDS             1..497
                     /gene="LOC121354853"
                     /coded_by="XM_041469849.1:233..1726"
                     /db_xref="GeneID:121354853"
ORIGIN      
        1 mlpsqallpa vvlalaalqa lasdtfmaav yehavilphp seepvspsha lalmnknmdv
       61 legaikeaaq qgahiivtpe dgiygwrftr esiypyledi pdpvvnwipc tdpsrfgpap
      121 vqerlscmar nnsiyvvani gdkkpcdssd pncprdgryh yntdvvfdaq gklvaryhky
      181 nlflgetqfn ypkepeavtf etpfgkfgif tcfdilfyep avvlvskmqv dtvlfptawm
      241 nvlpfltaie fhsawamgmr vnvlaanthn tsmemtgsgi yapagarsys ynmktedghl
      301 liaeldahpr lspasppavs wnsyalsver fsqneheftg vvfedlftft eltkpggnlt
      361 vcqkdlcchl sykmaekrdd evyvlgafdg lhvfegqyyl qictllkcps tnlstcgqpv
      421 emaqtkfemf slsgtfgtsy vfpevlysgv qlapgefevl rdgrlkskhg tskplitatl
      481 fgrlyekdqp hplrisl
//
LOCUS       XP_041325784             497 aa            linear   VRT 06-MAY-2021
DEFINITION  pantetheinase-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325784
VERSION     XP_041325784.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469850.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="pantetheinase-like isoform X3"
                     /calculated_mol_wt=55336
     Region          26..329
                     /region_name="biotinidase_like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     cd07567"
                     /db_xref="CDD:143591"
     Site            order(80,179,183,186,212..213,215..216,238)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     Site            order(80,179,212)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     Site            order(180..183,185,192..194,213,215..219,222..223,
                     244..245,247..249,251..252,276..277,326..329)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143591"
     Region          345..488
                     /region_name="Vanin_C"
                     /note="Vanin C-terminal domain; pfam19018"
                     /db_xref="CDD:465946"
     CDS             1..497
                     /gene="LOC121354853"
                     /coded_by="XM_041469850.1:246..1739"
                     /db_xref="GeneID:121354853"
ORIGIN      
        1 mlpsqallpa vvlalaalqa lasdtfmaav yehavilphp seepvspsha lalmnknmdv
       61 legaikeaaq qgahiivtpe dgiygwrftr esiypyledi pdpvvnwipc tdpsrfgpap
      121 vqerlscmar nnsiyvvani gdkkpcdssd pncprdgryh yntdvvfdaq gklvaryhky
      181 nlflgetqfn ypkepeavtf etpfgkfgif tcfdilfyep avvlvskmqv dtvlfptawm
      241 nvlpfltaie fhsawamgmr vnvlaanthn tsmemtgsgl ftpegpaayh ydsateegrl
      301 llaelnahpr lsptyppain wslyatsike fpgendtfsg avrkdiftfr elrhkdgnyt
      361 vcqgdlcchl vyqmskerrd evyvlgafdg lhgslikyhw qictllkcps tnlstcgqpv
      421 emaqtkfemf slsgtfgtsy vfpevlysgv qlapgefevl rdgrlkskhg tskplitatl
      481 fgrlyekdqp hplrisl
//
LOCUS       XP_041325785             497 aa            linear   VRT 06-MAY-2021
DEFINITION  vascular non-inflammatory molecule 2-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325785
VERSION     XP_041325785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..497
                     /product="vascular non-inflammatory molecule 2-like
                     isoform X2"
                     /calculated_mol_wt=55381
     Region          26..329
                     /region_name="biotinidase_like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     cd07567"
                     /db_xref="CDD:143591"
     Site            order(80,179,183,186,212..213,215..216,238)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     Site            order(80,179,212)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     Site            order(180..183,185,192..194,213,215..219,222..223,
                     244..245,247..249,251..252,276..277,326..329)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:143591"
     Region          345..488
                     /region_name="Vanin_C"
                     /note="Vanin C-terminal domain; pfam19018"
                     /db_xref="CDD:465946"
     CDS             1..497
                     /gene="LOC121354853"
                     /coded_by="XM_041469851.1:101..1594"
                     /db_xref="GeneID:121354853"
ORIGIN      
        1 mlpsqallpa vvlalaalqa lasdtfmaav yehavilphp seepvspsha lalmnknmdv
       61 legaikeaaq qgahiivtpe dgiygwrftr esiypyledi pdpvvnwipc tdpsrfgpap
      121 vqerlscmar nnsiyvvani gdkkpcdssd pncprdgryh yntdvvfdtq gklvaryhky
      181 nlfrretqfn ypkepeavtf etpfgkfgif tcfdilfyep avvlvskmqv dtvlfptawm
      241 nvlpfltaie fhsawamgmg vnllsanthn tsmamtgsgl ftpegpaayh ydsateegrl
      301 llaelnahpr lsptyppain wslyatsike fpgendtfsg avrkdiftfr elrhkdgnyt
      361 vcqgdlcchl vyqmskerrd evyvlgafdg lhgslikyhw qictllkcps tnlstcgqpv
      421 emaqtkfemf slsgtfgtsy vfpevlysgv qlapgefevl rdgrlkskhg tskplitatl
      481 fgrlyekdqp hplrisl
//
LOCUS       XP_041325786             455 aa            linear   VRT 06-MAY-2021
DEFINITION  MFS-type transporter SLC18B1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325786
VERSION     XP_041325786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="MFS-type transporter SLC18B1"
                     /calculated_mol_wt=48766
     Region          35..424
                     /region_name="MFS_SLC18B1"
                     /note="Solute carrier family 18 member B1 of the Major
                     Facilitator Superfamily of transporters; cd17385"
                     /db_xref="CDD:340943"
     Site            order(45..46,49..50,53,85,142..143,145..147,150,169,
                     172..173,176,242,245..246,249..251,254,282,286,343..344,
                     348,352,375,378..379,382..383,386)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340943"
     CDS             1..455
                     /gene="SLC18B1"
                     /coded_by="XM_041469852.1:65..1432"
                     /db_xref="GeneID:121354854"
ORIGIN      
        1 mgsraaggeq ppdegvseav geesrrltrd qlftivaaas infssmmcys ilgpffpsea
       61 ekkgasntvv glifgcfalf nfltslilgn ylsqigakfm fvsgmfvsgc vtilfgmldk
      121 vpsgpmfigf cflvramdai sfsaaitasf silakafptn iatvlgslei fsglglvlgp
      181 plggflyqsf gyevpfislg civlalvpvn mcilprydst prkesfwkli llpkvlilcl
      241 tifslsaclg ffdptislfi lkkftlpagy vglvflglal syslsspllg lvsdklphir
      301 kwllifgdlm tavclfmlgp apvlhiesql wmfvlvlvli gfslgmsaip vfpeilqcay
      361 engfeeglsl lglvsglfna mwslgafvgp ilggflneel gfewaaaiqg gwpllsglat
      421 gifyiieatr kssssslqnp pgdneertrl mgnet
//
LOCUS       XP_041325787             655 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: estrogen receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041325787
VERSION     XP_041325787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469853.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..655
                     /product="LOW QUALITY PROTEIN: estrogen receptor"
                     /calculated_mol_wt=73503
     Region          74..207
                     /region_name="Oest_recep"
                     /note="Oestrogen receptor; pfam02159"
                     /db_xref="CDD:460469"
     Region          206..287
                     /region_name="NR_DBD_ER"
                     /note="DNA-binding domain of estrogen receptors (ER) is
                     composed of two C4-type zinc fingers; cd07171"
                     /db_xref="CDD:143545"
     Site            order(211,214,228,231,247,253,263,266)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:143545"
     Site            order(220..223,229..230,232..234,236..237,260..261,264,
                     267)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143545"
     Site            order(246..249,253..254,259,262)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143545"
     Region          336..573
                     /region_name="NR_LBD_ER"
                     /note="Ligand binding domain of Estrogen receptor, which
                     are activated by the hormone 17beta-estradiol (estrogen);
                     cd06949"
                     /db_xref="CDD:132747"
     Site            order(372,377,379,413,420,547,550)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:132747"
     Site            order(384,388,401..402,406,564,568..569)
                     /site_type="other"
                     /note="coactivator recognition site [polypeptide binding]"
                     /db_xref="CDD:132747"
     Site            order(477,481,483..484,505,509..510,513,527..528,530..532,
                     534..535,538..539,541..542,545)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:132747"
     Region          578..614
                     /region_name="ESR1_C"
                     /note="Oestrogen-type nuclear receptor final C-terminal;
                     pfam12743"
                     /db_xref="CDD:432757"
     CDS             1..655
                     /gene="ESR1"
                     /coded_by="XM_041469853.1:15..1982"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121354855"
ORIGIN      
        1 matacweqcg lpaadlavds ksryvpcslp lvltmtlhtk tsgvtllhqi qgteletlsr
       61 pqlkiplers lsdmyvetsk tgvfnypega tydfgttapv yssttlsyap tsesfgsssl
      121 agfhslnsvp pspvvflqta pqlspfihhh sqqvpyylen dqgsfgmrea appafyrpss
      181 dnrrhsirer mssttekgsl amestketry cavcndyasg yhygvwsceg ckaffkrsiq
      241 ghndymcpat nqctidknrr kscqacrlrk cyevgmmkgg irkdrrggrv mkqkrqreeq
      301 dsrngeasst elraptlwts plvvkhnkkn spalsltaeq mvsalleaep pvvyseydpn
      361 rpfneasmmt lltnladrel vhminwakrv pgfvdltlhd qvhllecawl eilmiglvwr
      421 smehpgklsf apnllldrnq gkcvegmvei fdmllataar frmmniqgee fvclksiill
      481 nsgvytflss tlksleekdy ihrvldkitd tlihlmaksg lslqqqhrrl aqlllilshi
      541 rhmsnkgmeh lynmkcknvv plydllleml dahrlhapaa rssapveeen rsqlttasas
      601 shslqsfyvn skeeexyaey ningsqhiqw yekpssvlps scfissavpp lktlq
//
LOCUS       XP_041325788             319 aa            linear   VRT 06-MAY-2021
DEFINITION  laforin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325788
VERSION     XP_041325788.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469854.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..319
                     /product="laforin isoform X1"
                     /calculated_mol_wt=36226
     Region          1..116
                     /region_name="CBM20_laforin"
                     /note="Laforin protein tyrosine phosphatase, N-terminal
                     CBM20 (carbohydrate-binding module, family 20) domain.
                     Laforin, encoded by the EPM2A gene, is a dual-specificity
                     phosphatase that dephosphorylates complex carbohydrates.
                     Mutations in the gene encoding...; cd05806"
                     /db_xref="CDD:99881"
     Site            order(14..19,42,55,57)
                     /site_type="other"
                     /note="starch-binding site 2 [chemical binding]"
                     /db_xref="CDD:99881"
     Site            order(32,75,86..87,91)
                     /site_type="other"
                     /note="starch-binding site 1 [chemical binding]"
                     /db_xref="CDD:99881"
     Region          142..297
                     /region_name="DSP_laforin-like"
                     /note="dual specificity phosphatase domain of laforin and
                     similar domains; cd14526"
                     /db_xref="CDD:350375"
     CDS             1..319
                     /gene="EPM2A"
                     /coded_by="XM_041469854.1:322..1281"
                     /db_xref="GeneID:121354856"
ORIGIN      
        1 mlfrfgvvlp arvteggael lvagsrpelg ewdprravpm rrarpsaplp aqepalwlae
       61 valpdedaas pfwykflrre gghflwegsg phhdrccvyn qsnivdgvyc lpiahwievs
      121 ghtdemkhtt dfyfniaghq aihysrilpn iwlgscprql ehvtiklkhe lgvtavmnfq
      181 tesdivqnsw gcnrypepms peilmklyke eglayvwmpt admstegriq mlpqavcllh
      241 gllqnghtvy vhcnagvgrs taavsgwlry vmgwsirkvq yflasrrpav yideealnra
      301 eedfyqkfgh lrssyqiee
//
LOCUS       XP_041325789             194 aa            linear   VRT 06-MAY-2021
DEFINITION  laforin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325789
VERSION     XP_041325789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="laforin isoform X2"
                     /calculated_mol_wt=22240
     Region          17..172
                     /region_name="DSP_laforin-like"
                     /note="dual specificity phosphatase domain of laforin and
                     similar domains; cd14526"
                     /db_xref="CDD:350375"
     CDS             1..194
                     /gene="EPM2A"
                     /coded_by="XM_041469855.1:600..1184"
                     /db_xref="GeneID:121354856"
ORIGIN      
        1 mkhttdfyfn iaghqaihys rilpniwlgs cprqlehvti klkhelgvta vmnfqtesdi
       61 vqnswgcnry pepmspeilm klykeeglay vwmptadmst egriqmlpqa vcllhgllqn
      121 ghtvyvhcna gvgrstaavs gwlryvmgws irkvqyflas rrpavyidee alnraeedfy
      181 qkfghlrssy qiee
//
LOCUS       XP_041325790             194 aa            linear   VRT 06-MAY-2021
DEFINITION  laforin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325790
VERSION     XP_041325790.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469856.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="laforin isoform X2"
                     /calculated_mol_wt=22240
     Region          17..172
                     /region_name="DSP_laforin-like"
                     /note="dual specificity phosphatase domain of laforin and
                     similar domains; cd14526"
                     /db_xref="CDD:350375"
     CDS             1..194
                     /gene="EPM2A"
                     /coded_by="XM_041469856.1:642..1226"
                     /db_xref="GeneID:121354856"
ORIGIN      
        1 mkhttdfyfn iaghqaihys rilpniwlgs cprqlehvti klkhelgvta vmnfqtesdi
       61 vqnswgcnry pepmspeilm klykeeglay vwmptadmst egriqmlpqa vcllhgllqn
      121 ghtvyvhcna gvgrstaavs gwlryvmgws irkvqyflas rrpavyidee alnraeedfy
      181 qkfghlrssy qiee
//
LOCUS       XP_041325792             132 aa            linear   VRT 06-MAY-2021
DEFINITION  fatty acid-binding protein, brain [Pyrgilauda ruficollis].
ACCESSION   XP_041325792
VERSION     XP_041325792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="fatty acid-binding protein, brain"
                     /calculated_mol_wt=14821
     Region          2..131
                     /region_name="FABP7"
                     /note="Fatty acid binding protein 7; cd19470"
                     /db_xref="CDD:381245"
     Site            order(5,17,20..21,24,26,30..31,34,37,39,41,43,50,52,54,56,
                     58..59,61,63,65,73..77,79,92,94,105,107,114,116,118,127,
                     129)
                     /site_type="other"
                     /note="ligand binding cavity [chemical binding]"
                     /db_xref="CDD:381245"
     CDS             1..132
                     /gene="FABP7"
                     /coded_by="XM_041469858.1:61..459"
                     /db_xref="GeneID:121354857"
ORIGIN      
        1 mveafcatwk lvdshnfdey mkalgvgfat rqvgnvtkpt viisnegdkv virtqstfkn
       61 teisfklgee fdettpddrn cksvvtldge klvhiqkwdg ketnfvreik dgkmvmtltf
      121 gdvvavrhye ka
//
LOCUS       XP_041325793             455 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 7B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325793
VERSION     XP_041325793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..455
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 7B
                     isoform X1"
                     /calculated_mol_wt=52511
     Region          224..414
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..455
                     /gene="PDE7B"
                     /coded_by="XM_041469859.1:145..1512"
                     /db_xref="GeneID:121354858"
ORIGIN      
        1 mpvlerffpa aepgrrrrtg depmpfpmgs lpgyqqgtla wdlpemikmv klvwkskgel
       61 rgakhrgvle sedalggsag darvrgqtgv vserrgsypf idfrllnntt lsgeigtkkk
      121 vkrllsfqry fhasrllrgi vpqaslylld edylgqarhm lskvgmwdfd iflfdrltng
      181 nslvtllchl fnvhglihhf qldmvtlhrf fvmvqedyhs qnpyhnavha advtqamhcy
      241 lrepknvsvl enhhwrstig mlresrllah lpkevtqdie qqlgslilat dinrqnefli
      301 rlkshldnqd lrledaqdrh fmlqialkca dicnpcrvwd lskqwservc eefyrqgdle
      361 qkfeleispl cnqqkdtvps iqigfmtyiv eplferwaqf tgntplsenm lnhlrrnkak
      421 wrsllhkqhs ssrsndhsgq vtgsqeqtln eeetp
//
LOCUS       XP_041325794             449 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 7B isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325794
VERSION     XP_041325794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469860.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..449
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 7B
                     isoform X2"
                     /calculated_mol_wt=51754
     Region          174..408
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..449
                     /gene="PDE7B"
                     /coded_by="XM_041469860.1:263..1612"
                     /db_xref="GeneID:121354858"
ORIGIN      
        1 msclmvercg eisfdspdqn akcvrmlgkg darvrgqtgv vserrgsypf idfrllnntt
       61 lsgeigtkkk vkrllsfqry fhasrllrgi vpqaslylld edylgqarhm lskvgmwdfd
      121 iflfdrltng nslvtllchl fnvhglihhf qldmvtlhrf fvmvqedyhs qnpyhnavha
      181 advtqamhcy lrepklanfl tpsdimlgll aaaahdvdhp gvnqpflikt khhlaslyqn
      241 vsvlenhhwr stigmlresr llahlpkevt qdieqqlgsl ilatdinrqn eflirlkshl
      301 dnqdlrleda qdrhfmlqia lkcadicnpc rvwdlskqws ervceefyrq gdleqkfele
      361 isplcnqqkd tvpsiqigfm tyiveplfer waqftgntpl senmlnhlrr nkakwrsllh
      421 kqhsssrsnd hsgqvtgsqe qtlneeetp
//
LOCUS       XP_041325795             447 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 7B isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325795
VERSION     XP_041325795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..447
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 7B
                     isoform X3"
                     /calculated_mol_wt=51569
     Region          172..406
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..447
                     /gene="PDE7B"
                     /coded_by="XM_041469861.1:263..1606"
                     /db_xref="GeneID:121354858"
ORIGIN      
        1 msclmvercg eisfdspdqn akcvrmlgda rvrgqtgvvs errgsypfid frllnnttls
       61 geigtkkkvk rllsfqryfh asrllrgivp qaslyllded ylgqarhmls kvgmwdfdif
      121 lfdrltngns lvtllchlfn vhglihhfql dmvtlhrffv mvqedyhsqn pyhnavhaad
      181 vtqamhcylr epklanfltp sdimlgllaa aahdvdhpgv nqpfliktkh hlaslyqnvs
      241 vlenhhwrst igmlresrll ahlpkevtqd ieqqlgslil atdinrqnef lirlkshldn
      301 qdlrledaqd rhfmlqialk cadicnpcrv wdlskqwser vceefyrqgd leqkfeleis
      361 plcnqqkdtv psiqigfmty iveplferwa qftgntplse nmlnhlrrnk akwrsllhkq
      421 hsssrsndhs gqvtgsqeqt lneeetp
//
LOCUS       XP_041325796             499 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-specific 3',5'-cyclic phosphodiesterase 7B isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325796
VERSION     XP_041325796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..499
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..499
                     /product="cAMP-specific 3',5'-cyclic phosphodiesterase 7B
                     isoform X4"
                     /calculated_mol_wt=57273
     Region          224..458
                     /region_name="PDEase_I"
                     /note="3'5'-cyclic nucleotide phosphodiesterase;
                     pfam00233"
                     /db_xref="CDD:459723"
     CDS             1..499
                     /gene="PDE7B"
                     /coded_by="XM_041469862.1:223..1722"
                     /db_xref="GeneID:121354858"
ORIGIN      
        1 mpvlerffpa aepgrrrrtg depmpfpmgs lpgyqqgtla wdlpemikmv klvwkskgel
       61 rgakhrgvle sedalggsag darvrgqtgv vserrgsypf idfrllnntt lsgeigtkkk
      121 vkrllsfqry fhasrllrgi vpqaslylld edylgqarhm lskvgmwdfd iflfdrltng
      181 nslvtllchl fnvhglihhf qldmvtlhrf fvmvqedyhs qnpyhnavha advtqamhcy
      241 lrepklanfl tpsdimlgll aaaahdvdhp gvnqpflikt khhlaslyqn vsvlenhhwr
      301 stigmlresr llahlpkevt qdieqqlgsl ilatdinrqn eflirlkshl dnqdlrleda
      361 qdrhfmlqia lkcadicnpc rvwdlskqws ervceefyrq gdleqkfele isplcnqqkd
      421 tvpsiqigfm tyiveplfer waqftgntpl senmlnhlrr nkakwrsllh kqhsssrsnd
      481 hsgqvtgsqe qtlneeetp
//
LOCUS       XP_041325797             915 aa            linear   VRT 06-MAY-2021
DEFINITION  lethal(3)malignant brain tumor-like protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325797
VERSION     XP_041325797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..915
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..915
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X1"
                     /calculated_mol_wt=102154
     Region          338..438
                     /region_name="MBT_L3MBTL3_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20132"
                     /db_xref="CDD:439122"
     Site            order(353,356,359,361,377,380,384)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439122"
     Region          445..537
                     /region_name="MBT_L3MBTL3_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20135"
                     /db_xref="CDD:439125"
     Site            order(460,463,466,468,484,487,491)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439125"
     Region          546..623
                     /region_name="MBT_L3MBTL3_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20138"
                     /db_xref="CDD:439128"
     Site            order(564,567,570,572,588,591,595)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439128"
     Region          637..665
                     /region_name="zf-C2HC"
                     /note="Zinc finger, C2HC type; pfam01530"
                     /db_xref="CDD:460240"
     Region          840..905
                     /region_name="SAM_Scm-like-3MBT3,4"
                     /note="SAM domain of Scm-like-3MBT3,4 proteins of Polycomb
                     group; cd09582"
                     /db_xref="CDD:188981"
     Site            order(869..871,873..874,877..878,881..882,887)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     Site            order(890..893,895..896,899,902)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     CDS             1..915
                     /gene="L3MBTL3"
                     /coded_by="XM_041469863.1:53..2800"
                     /db_xref="GeneID:121354859"
ORIGIN      
        1 mvfppprrsg rtrererksc sagpgaggcg agrgralrgg gvcrplpreg vtslprdarr
       61 saasgrgasp rsplekkrar ppppppsppr wgrgggrrst cimnesassg ngqefdvfsa
      121 mdwkdgigtl pgsdlkfrvn efgalevitd etemesvkka tatttwmvpt aqeafsektg
      181 iptrlketak vdglvfcenc yrygtieefv pegkfcsqkc aqqvknkepk eenpsmecng
      241 eddskgirkr kakvplkeep rdngekkenp deiedkpegr ilrvsqrarr krkgeitvlk
      301 qtvpskgrqa wcwasyleee kaiavptklf keyqsfpynk ngfkvgmkle gvdpehqsiy
      361 cvltvaevcg yrvrlhfdgy pdcydfwvna dssdihpvgw cektghklhp pkgykeeefs
      421 wpsylkacka qaapkslfen qnatvipsgf rvgmkleavd kknptficva tvtdmvdnrf
      481 lvhfdnwdes ydywceaasp hihpvgwcke hkrtlitppd yphakhfswe kyleetsslp
      541 aparafkvkp shgfqknmkl evvdkrnpvf irvativdtd dyrikvhfdg wdsiydywtd
      601 vdspdihpag wctktghplq pplsplelve alehggcpta gckgvghikr arhighhsav
      661 scpysemnln kesllpdrls gempaaspip rnrkvetner stspvindrk cpspghvgmk
      721 ssphnrpsgk tvpettkled aenkspckkp llcnvkekka pggvlqtkda ikhkecedee
      781 tenkllisne ikdveepntq rllsqpvivs sklqipglpl rweqqskllp svagipaskv
      841 skwstdevse firslpgcee hgkvfkdeqi dgeafllmtq sdivkimsik lgpalkifns
      901 ilmfkaaekn shnel
//
LOCUS       XP_041325798             813 aa            linear   VRT 06-MAY-2021
DEFINITION  lethal(3)malignant brain tumor-like protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325798
VERSION     XP_041325798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X2"
                     /calculated_mol_wt=91469
     Region          236..336
                     /region_name="MBT_L3MBTL3_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20132"
                     /db_xref="CDD:439122"
     Site            order(251,254,257,259,275,278,282)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439122"
     Region          343..435
                     /region_name="MBT_L3MBTL3_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20135"
                     /db_xref="CDD:439125"
     Site            order(358,361,364,366,382,385,389)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439125"
     Region          444..521
                     /region_name="MBT_L3MBTL3_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20138"
                     /db_xref="CDD:439128"
     Site            order(462,465,468,470,486,489,493)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439128"
     Region          535..563
                     /region_name="zf-C2HC"
                     /note="Zinc finger, C2HC type; pfam01530"
                     /db_xref="CDD:460240"
     Region          738..803
                     /region_name="SAM_Scm-like-3MBT3,4"
                     /note="SAM domain of Scm-like-3MBT3,4 proteins of Polycomb
                     group; cd09582"
                     /db_xref="CDD:188981"
     Site            order(767..769,771..772,775..776,779..780,785)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     Site            order(788..791,793..794,797,800)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     CDS             1..813
                     /gene="L3MBTL3"
                     /coded_by="XM_041469864.1:30..2471"
                     /db_xref="GeneID:121354859"
ORIGIN      
        1 mnesassgng qefdvfsamd wkdgigtlpg sdlkfrvnef galevitdet emesvkkata
       61 tttwmvptaq eafsektgip trlketakvd glvfcencyr ygtieefvpe gkfcsqkcaq
      121 qvknkepkee npsmecnged dskgirkrka kvplkeeprd ngekkenpde iedkpegril
      181 rvsqrarrkr kgeitvlkqt vpskgrqawc wasyleeeka iavptklfke yqsfpynkng
      241 fkvgmklegv dpehqsiycv ltvaevcgyr vrlhfdgypd cydfwvnads sdihpvgwce
      301 ktghklhppk gykeeefswp sylkackaqa apkslfenqn atvipsgfrv gmkleavdkk
      361 nptficvatv tdmvdnrflv hfdnwdesyd ywceaasphi hpvgwckehk rtlitppdyp
      421 hakhfsweky leetsslpap arafkvkpsh gfqknmklev vdkrnpvfir vativdtddy
      481 rikvhfdgwd siydywtdvd spdihpagwc tktghplqpp lsplelveal ehggcptagc
      541 kgvghikrar highhsavsc pysemnlnke sllpdrlsge mpaaspiprn rkvetnerst
      601 spvindrkcp spghvgmkss phnrpsgktv pettkledae nkspckkpll cnvkekkapg
      661 gvlqtkdaik hkecedeete nkllisneik dveepntqrl lsqpvivssk lqipglplrw
      721 eqqskllpsv agipaskvsk wstdevsefi rslpgceehg kvfkdeqidg eafllmtqsd
      781 ivkimsiklg palkifnsil mfkaaeknsh nel
//
LOCUS       XP_041325799             813 aa            linear   VRT 06-MAY-2021
DEFINITION  lethal(3)malignant brain tumor-like protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325799
VERSION     XP_041325799.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469865.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X2"
                     /calculated_mol_wt=91469
     Region          236..336
                     /region_name="MBT_L3MBTL3_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20132"
                     /db_xref="CDD:439122"
     Site            order(251,254,257,259,275,278,282)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439122"
     Region          343..435
                     /region_name="MBT_L3MBTL3_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20135"
                     /db_xref="CDD:439125"
     Site            order(358,361,364,366,382,385,389)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439125"
     Region          444..521
                     /region_name="MBT_L3MBTL3_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20138"
                     /db_xref="CDD:439128"
     Site            order(462,465,468,470,486,489,493)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439128"
     Region          535..563
                     /region_name="zf-C2HC"
                     /note="Zinc finger, C2HC type; pfam01530"
                     /db_xref="CDD:460240"
     Region          738..803
                     /region_name="SAM_Scm-like-3MBT3,4"
                     /note="SAM domain of Scm-like-3MBT3,4 proteins of Polycomb
                     group; cd09582"
                     /db_xref="CDD:188981"
     Site            order(767..769,771..772,775..776,779..780,785)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     Site            order(788..791,793..794,797,800)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     CDS             1..813
                     /gene="L3MBTL3"
                     /coded_by="XM_041469865.1:30..2471"
                     /db_xref="GeneID:121354859"
ORIGIN      
        1 mnesassgng qefdvfsamd wkdgigtlpg sdlkfrvnef galevitdet emesvkkata
       61 tttwmvptaq eafsektgip trlketakvd glvfcencyr ygtieefvpe gkfcsqkcaq
      121 qvknkepkee npsmecnged dskgirkrka kvplkeeprd ngekkenpde iedkpegril
      181 rvsqrarrkr kgeitvlkqt vpskgrqawc wasyleeeka iavptklfke yqsfpynkng
      241 fkvgmklegv dpehqsiycv ltvaevcgyr vrlhfdgypd cydfwvnads sdihpvgwce
      301 ktghklhppk gykeeefswp sylkackaqa apkslfenqn atvipsgfrv gmkleavdkk
      361 nptficvatv tdmvdnrflv hfdnwdesyd ywceaasphi hpvgwckehk rtlitppdyp
      421 hakhfsweky leetsslpap arafkvkpsh gfqknmklev vdkrnpvfir vativdtddy
      481 rikvhfdgwd siydywtdvd spdihpagwc tktghplqpp lsplelveal ehggcptagc
      541 kgvghikrar highhsavsc pysemnlnke sllpdrlsge mpaaspiprn rkvetnerst
      601 spvindrkcp spghvgmkss phnrpsgktv pettkledae nkspckkpll cnvkekkapg
      661 gvlqtkdaik hkecedeete nkllisneik dveepntqrl lsqpvivssk lqipglplrw
      721 eqqskllpsv agipaskvsk wstdevsefi rslpgceehg kvfkdeqidg eafllmtqsd
      781 ivkimsiklg palkifnsil mfkaaeknsh nel
//
LOCUS       XP_041325801             769 aa            linear   VRT 06-MAY-2021
DEFINITION  lethal(3)malignant brain tumor-like protein 3 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325801
VERSION     XP_041325801.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469867.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X3"
                     /calculated_mol_wt=85981
     Region          338..438
                     /region_name="MBT_L3MBTL3_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20132"
                     /db_xref="CDD:439122"
     Site            order(353,356,359,361,377,380,384)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439122"
     Region          445..537
                     /region_name="MBT_L3MBTL3_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20135"
                     /db_xref="CDD:439125"
     Site            order(460,463,466,468,484,487,491)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439125"
     Region          546..623
                     /region_name="MBT_L3MBTL3_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20138"
                     /db_xref="CDD:439128"
     Site            order(564,567,570,572,588,591,595)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439128"
     Region          637..665
                     /region_name="zf-C2HC"
                     /note="Zinc finger, C2HC type; pfam01530"
                     /db_xref="CDD:460240"
     CDS             1..769
                     /gene="L3MBTL3"
                     /coded_by="XM_041469867.1:59..2368"
                     /db_xref="GeneID:121354859"
ORIGIN      
        1 mvfppprrsg rtrererksc sagpgaggcg agrgralrgg gvcrplpreg vtslprdarr
       61 saasgrgasp rsplekkrar ppppppsppr wgrgggrrst cimnesassg ngqefdvfsa
      121 mdwkdgigtl pgsdlkfrvn efgalevitd etemesvkka tatttwmvpt aqeafsektg
      181 iptrlketak vdglvfcenc yrygtieefv pegkfcsqkc aqqvknkepk eenpsmecng
      241 eddskgirkr kakvplkeep rdngekkenp deiedkpegr ilrvsqrarr krkgeitvlk
      301 qtvpskgrqa wcwasyleee kaiavptklf keyqsfpynk ngfkvgmkle gvdpehqsiy
      361 cvltvaevcg yrvrlhfdgy pdcydfwvna dssdihpvgw cektghklhp pkgykeeefs
      421 wpsylkacka qaapkslfen qnatvipsgf rvgmkleavd kknptficva tvtdmvdnrf
      481 lvhfdnwdes ydywceaasp hihpvgwcke hkrtlitppd yphakhfswe kyleetsslp
      541 aparafkvkp shgfqknmkl evvdkrnpvf irvativdtd dyrikvhfdg wdsiydywtd
      601 vdspdihpag wctktghplq pplsplelve alehggcpta gckgvghikr arhighhsav
      661 scpysemnln kesllpdrls gempaaspip rnrkvetner stspvindrk cpspghvgmk
      721 ssphnrpsgk tvpettkled aenkspckkp llcnvkekka pgkfwfari
//
LOCUS       XP_041325802             813 aa            linear   VRT 06-MAY-2021
DEFINITION  lethal(3)malignant brain tumor-like protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325802
VERSION     XP_041325802.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469868.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X2"
                     /calculated_mol_wt=91469
     Region          236..336
                     /region_name="MBT_L3MBTL3_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20132"
                     /db_xref="CDD:439122"
     Site            order(251,254,257,259,275,278,282)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439122"
     Region          343..435
                     /region_name="MBT_L3MBTL3_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20135"
                     /db_xref="CDD:439125"
     Site            order(358,361,364,366,382,385,389)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439125"
     Region          444..521
                     /region_name="MBT_L3MBTL3_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20138"
                     /db_xref="CDD:439128"
     Site            order(462,465,468,470,486,489,493)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439128"
     Region          535..563
                     /region_name="zf-C2HC"
                     /note="Zinc finger, C2HC type; pfam01530"
                     /db_xref="CDD:460240"
     Region          738..803
                     /region_name="SAM_Scm-like-3MBT3,4"
                     /note="SAM domain of Scm-like-3MBT3,4 proteins of Polycomb
                     group; cd09582"
                     /db_xref="CDD:188981"
     Site            order(767..769,771..772,775..776,779..780,785)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     Site            order(788..791,793..794,797,800)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     CDS             1..813
                     /gene="L3MBTL3"
                     /coded_by="XM_041469868.1:334..2775"
                     /db_xref="GeneID:121354859"
ORIGIN      
        1 mnesassgng qefdvfsamd wkdgigtlpg sdlkfrvnef galevitdet emesvkkata
       61 tttwmvptaq eafsektgip trlketakvd glvfcencyr ygtieefvpe gkfcsqkcaq
      121 qvknkepkee npsmecnged dskgirkrka kvplkeeprd ngekkenpde iedkpegril
      181 rvsqrarrkr kgeitvlkqt vpskgrqawc wasyleeeka iavptklfke yqsfpynkng
      241 fkvgmklegv dpehqsiycv ltvaevcgyr vrlhfdgypd cydfwvnads sdihpvgwce
      301 ktghklhppk gykeeefswp sylkackaqa apkslfenqn atvipsgfrv gmkleavdkk
      361 nptficvatv tdmvdnrflv hfdnwdesyd ywceaasphi hpvgwckehk rtlitppdyp
      421 hakhfsweky leetsslpap arafkvkpsh gfqknmklev vdkrnpvfir vativdtddy
      481 rikvhfdgwd siydywtdvd spdihpagwc tktghplqpp lsplelveal ehggcptagc
      541 kgvghikrar highhsavsc pysemnlnke sllpdrlsge mpaaspiprn rkvetnerst
      601 spvindrkcp spghvgmkss phnrpsgktv pettkledae nkspckkpll cnvkekkapg
      661 gvlqtkdaik hkecedeete nkllisneik dveepntqrl lsqpvivssk lqipglplrw
      721 eqqskllpsv agipaskvsk wstdevsefi rslpgceehg kvfkdeqidg eafllmtqsd
      781 ivkimsiklg palkifnsil mfkaaeknsh nel
//
LOCUS       XP_041325803             813 aa            linear   VRT 06-MAY-2021
DEFINITION  lethal(3)malignant brain tumor-like protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325803
VERSION     XP_041325803.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469869.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X2"
                     /calculated_mol_wt=91469
     Region          236..336
                     /region_name="MBT_L3MBTL3_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20132"
                     /db_xref="CDD:439122"
     Site            order(251,254,257,259,275,278,282)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439122"
     Region          343..435
                     /region_name="MBT_L3MBTL3_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20135"
                     /db_xref="CDD:439125"
     Site            order(358,361,364,366,382,385,389)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439125"
     Region          444..521
                     /region_name="MBT_L3MBTL3_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20138"
                     /db_xref="CDD:439128"
     Site            order(462,465,468,470,486,489,493)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439128"
     Region          535..563
                     /region_name="zf-C2HC"
                     /note="Zinc finger, C2HC type; pfam01530"
                     /db_xref="CDD:460240"
     Region          738..803
                     /region_name="SAM_Scm-like-3MBT3,4"
                     /note="SAM domain of Scm-like-3MBT3,4 proteins of Polycomb
                     group; cd09582"
                     /db_xref="CDD:188981"
     Site            order(767..769,771..772,775..776,779..780,785)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     Site            order(788..791,793..794,797,800)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     CDS             1..813
                     /gene="L3MBTL3"
                     /coded_by="XM_041469869.1:187..2628"
                     /db_xref="GeneID:121354859"
ORIGIN      
        1 mnesassgng qefdvfsamd wkdgigtlpg sdlkfrvnef galevitdet emesvkkata
       61 tttwmvptaq eafsektgip trlketakvd glvfcencyr ygtieefvpe gkfcsqkcaq
      121 qvknkepkee npsmecnged dskgirkrka kvplkeeprd ngekkenpde iedkpegril
      181 rvsqrarrkr kgeitvlkqt vpskgrqawc wasyleeeka iavptklfke yqsfpynkng
      241 fkvgmklegv dpehqsiycv ltvaevcgyr vrlhfdgypd cydfwvnads sdihpvgwce
      301 ktghklhppk gykeeefswp sylkackaqa apkslfenqn atvipsgfrv gmkleavdkk
      361 nptficvatv tdmvdnrflv hfdnwdesyd ywceaasphi hpvgwckehk rtlitppdyp
      421 hakhfsweky leetsslpap arafkvkpsh gfqknmklev vdkrnpvfir vativdtddy
      481 rikvhfdgwd siydywtdvd spdihpagwc tktghplqpp lsplelveal ehggcptagc
      541 kgvghikrar highhsavsc pysemnlnke sllpdrlsge mpaaspiprn rkvetnerst
      601 spvindrkcp spghvgmkss phnrpsgktv pettkledae nkspckkpll cnvkekkapg
      661 gvlqtkdaik hkecedeete nkllisneik dveepntqrl lsqpvivssk lqipglplrw
      721 eqqskllpsv agipaskvsk wstdevsefi rslpgceehg kvfkdeqidg eafllmtqsd
      781 ivkimsiklg palkifnsil mfkaaeknsh nel
//
LOCUS       XP_041325804             813 aa            linear   VRT 06-MAY-2021
DEFINITION  lethal(3)malignant brain tumor-like protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325804
VERSION     XP_041325804.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469870.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..813
                     /product="lethal(3)malignant brain tumor-like protein 3
                     isoform X2"
                     /calculated_mol_wt=91469
     Region          236..336
                     /region_name="MBT_L3MBTL3_rpt1"
                     /note="first malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20132"
                     /db_xref="CDD:439122"
     Site            order(251,254,257,259,275,278,282)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439122"
     Region          343..435
                     /region_name="MBT_L3MBTL3_rpt2"
                     /note="second malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20135"
                     /db_xref="CDD:439125"
     Site            order(358,361,364,366,382,385,389)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439125"
     Region          444..521
                     /region_name="MBT_L3MBTL3_rpt3"
                     /note="third malignant brain tumor (MBT) repeat found in
                     Lethal(3)malignant brain tumor-like protein 3 (L3MBTL3);
                     cd20138"
                     /db_xref="CDD:439128"
     Site            order(462,465,468,470,486,489,493)
                     /site_type="other"
                     /note="methyllysine peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:439128"
     Region          535..563
                     /region_name="zf-C2HC"
                     /note="Zinc finger, C2HC type; pfam01530"
                     /db_xref="CDD:460240"
     Region          738..803
                     /region_name="SAM_Scm-like-3MBT3,4"
                     /note="SAM domain of Scm-like-3MBT3,4 proteins of Polycomb
                     group; cd09582"
                     /db_xref="CDD:188981"
     Site            order(767..769,771..772,775..776,779..780,785)
                     /site_type="other"
                     /note="putative oligomer interface ML [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     Site            order(788..791,793..794,797,800)
                     /site_type="other"
                     /note="putative oligomer interface EH [polypeptide
                     binding]"
                     /db_xref="CDD:188981"
     CDS             1..813
                     /gene="L3MBTL3"
                     /coded_by="XM_041469870.1:183..2624"
                     /db_xref="GeneID:121354859"
ORIGIN      
        1 mnesassgng qefdvfsamd wkdgigtlpg sdlkfrvnef galevitdet emesvkkata
       61 tttwmvptaq eafsektgip trlketakvd glvfcencyr ygtieefvpe gkfcsqkcaq
      121 qvknkepkee npsmecnged dskgirkrka kvplkeeprd ngekkenpde iedkpegril
      181 rvsqrarrkr kgeitvlkqt vpskgrqawc wasyleeeka iavptklfke yqsfpynkng
      241 fkvgmklegv dpehqsiycv ltvaevcgyr vrlhfdgypd cydfwvnads sdihpvgwce
      301 ktghklhppk gykeeefswp sylkackaqa apkslfenqn atvipsgfrv gmkleavdkk
      361 nptficvatv tdmvdnrflv hfdnwdesyd ywceaasphi hpvgwckehk rtlitppdyp
      421 hakhfsweky leetsslpap arafkvkpsh gfqknmklev vdkrnpvfir vativdtddy
      481 rikvhfdgwd siydywtdvd spdihpagwc tktghplqpp lsplelveal ehggcptagc
      541 kgvghikrar highhsavsc pysemnlnke sllpdrlsge mpaaspiprn rkvetnerst
      601 spvindrkcp spghvgmkss phnrpsgktv pettkledae nkspckkpll cnvkekkapg
      661 gvlqtkdaik hkecedeete nkllisneik dveepntqrl lsqpvivssk lqipglplrw
      721 eqqskllpsv agipaskvsk wstdevsefi rslpgceehg kvfkdeqidg eafllmtqsd
      781 ivkimsiklg palkifnsil mfkaaeknsh nel
//
LOCUS       XP_041325805             888 aa            linear   VRT 06-MAY-2021
DEFINITION  ectonucleotide pyrophosphatase/phosphodiesterase family member 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325805
VERSION     XP_041325805.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469871.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..888
                     /product="ectonucleotide pyrophosphatase/phosphodiesterase
                     family member 3"
                     /calculated_mol_wt=100995
     Region          67..106
                     /region_name="Somatomedin_B"
                     /note="Somatomedin B domain; pfam01033"
                     /db_xref="CDD:460034"
     Region          115..150
                     /region_name="Somatomedin_B"
                     /note="Somatomedin B domain; pfam01033"
                     /db_xref="CDD:460034"
     Region          173..539
                     /region_name="Enpp"
                     /note="Ectonucleotide pyrophosphatase/phosphodiesterase,
                     also called autotaxin; cd16018"
                     /db_xref="CDD:293742"
     Site            order(181,218..219,240,339,343,386..387,496)
                     /site_type="active"
                     /db_xref="CDD:293742"
     Site            order(181,218..219,240,339,343,387,496)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293742"
     Site            521..523
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293742"
     Region          639..869
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; smart00477"
                     /db_xref="CDD:214683"
     Site            order(701..702,704,741,745)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(701..702,745)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     CDS             1..888
                     /gene="ENPP3"
                     /coded_by="XM_041469871.1:11..2677"
                     /db_xref="GeneID:121354860"
ORIGIN      
        1 meleddiskd hrgyseeisl kseeyvkkkt vlkykvicav llcalvvisl glglglglnr
       61 gnqeqvscrh kcnephrkdv pgcqcdssck erqdccwdye dtcveptrsw kctnfrcgea
      121 ripgsycscs ddclqkkdcc vnyysickge tswveepcvs vetpqcpdgf tlpplilfsm
      181 dgfraeylet wssllpniek lktcgthsky mraayptktf pnhytivtgl ypeshgiidn
      241 nmydvdlnah fslsgeekfk pawwkgqpvw ltamsqnlka gtffwpgsdv piggtyptly
      301 tiyngsipye erisgilkwl dnaqperpdi ytlyieepds sghsfgpvsa gvikalqaad
      361 kavgmlmdgl kqrnlhkcvn livladhgme rtyckqleym tnyfkevdfy lyagpaarir
      421 aknvpkdyft fdsdgivknl tcrrspqhfk pyltpdlpkr fhyannirid kvhllvdrqw
      481 lavrdesyrs cdggnhgynn efksmeaifl aygpsfkekt evdafeniev ynlmcdllhi
      541 apaenngthg slnhllkkpf ynpshpkevs spsscpvssl tpaddlgcnc tqtsvaspee
      601 lnerlnltte eikkassshl pygrpkvlqk ekfycllshh qyvsgysydi wmplwtaytv
      661 nkpentsplp ptvsdclrpd vripaawsqn csdypegltl thsflyppny nssdleqyda
      721 lltsnivpmy kafkdiwdyf hnvllqkyar erngvnvvsg pvfdynydgh fdspdeikqy
      781 vnntkipvpt hyyvvltsck nisytplncq gsldalsfii phrpdntesc aenktlsewv
      841 eervqahsar vrdvellagl dfyqernepv seilrlktfl pifetesn
//
LOCUS       XP_041325806             811 aa            linear   VRT 06-MAY-2021
DEFINITION  mutS protein homolog 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325806
VERSION     XP_041325806.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469872.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..811
                     /product="mutS protein homolog 5"
                     /calculated_mol_wt=91214
     Region          <107..747
                     /region_name="PRK05399"
                     /note="DNA mismatch repair protein MutS; Provisional"
                     /db_xref="CDD:235444"
     Region          535..739
                     /region_name="ABC_MSH5_euk"
                     /note="ATP-binding cassette domain of eukaryotic MutS5
                     homolog; cd03281"
                     /db_xref="CDD:213248"
     Site            569..576
                     /site_type="other"
                     /note="Walker A/P-loop"
                     /db_xref="CDD:213248"
     Site            order(572..573,575..577,613,648..649,685)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:213248"
     Site            610..613
                     /site_type="other"
                     /note="Q-loop/lid"
                     /db_xref="CDD:213248"
     Site            618..631
                     /site_type="other"
                     /note="ABC transporter signature motif"
                     /db_xref="CDD:213248"
     Site            644..649
                     /site_type="other"
                     /note="Walker B"
                     /db_xref="CDD:213248"
     Site            652..655
                     /site_type="other"
                     /note="D-loop"
                     /db_xref="CDD:213248"
     Site            681..687
                     /site_type="other"
                     /note="H-loop/switch region"
                     /db_xref="CDD:213248"
     CDS             1..811
                     /gene="MSH5"
                     /coded_by="XM_041469872.1:1..2436"
                     /db_xref="GeneID:121354861"
ORIGIN      
        1 msatsatsca lppapgpeqe eqessethms vlwyagqlai tyydtedcsv yfmpdtpdne
       61 dlkllqkvig elnpqcivts akqdqniakf ltnltatagd kdigkpeivl fpnidfglev
      121 skqrilsrqf pfipshmtat ekilylssii pfesplmira lggllkfldr rrvgveleds
      181 siavpilafk kfvlsdtvnm dqdtycvlqi fksdihpsvy klssgvkegf slfgilnrcr
      241 ckwgekllrl wltrptrnlt elnkrldvin ffllaqnhet vltlqnclkn iknvplilkr
      301 mtlsntkvsd whalyktayn avclrdtcrs lpntielfqt isrvftddlr yianliskvv
      361 dfegslsenr ftvrpnvdat idekkrklmg lsdfltevae keletldnhi pfcaviyipl
      421 igfllsiprl pnmvdktdfe iegldfmfls ddklhyrsar tkeldsllgd lhceirdqet
      481 limhqlqtri leksevlnsv ieyaahldvl lalaataren aycrprfthr hgfhikdgrh
      541 plmelcaktf vanpvdsgea trrikiitgp nssgksvylk qvglivflal igsyvpaaea
      601 eigvidgiyt rihsresvsv glstfmidln qvakavnnat erslvlidef gkgtntldgl
      661 sllaavlryw irqgtqcpqv fvstnfhslm qlellpdtpl leyltmethq dgeeliffyq
      721 ikqgistish aaniaalagm pakiiergve vselirngkp ikcldhpsky drmekcksiv
      781 ekflcidldd pqvdleefms kevlpsaasv l
//
LOCUS       XP_041325807             404 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchoring protein 7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325807
VERSION     XP_041325807.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469873.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="A-kinase anchoring protein 7 isoform X1"
                     /calculated_mol_wt=45160
     Region          140..337
                     /region_name="AKAP7_NLS"
                     /note="AKAP7 2'5' RNA ligase-like domain; pfam10469"
                     /db_xref="CDD:402204"
     Region          344..400
                     /region_name="AKAP7_RIRII_bdg"
                     /note="PKA-RI-RII subunit binding domain of A-kinase
                     anchor protein; pfam10470"
                     /db_xref="CDD:463101"
     CDS             1..404
                     /gene="AKAP7"
                     /coded_by="XM_041469873.1:121..1335"
                     /db_xref="GeneID:121354862"
ORIGIN      
        1 mrpllqrllp alcsaaaral lvrravpmal wpaegaarag gdarsaagaa pehdgleniq
       61 ekkifkedke ktqqseepca adsvdslmae mpfvdidied ecamhatsel svkkkrkrtt
      121 gremeegier kkkknkqyqp nyfislpitn pkitgsiqal qdaiiqkdqr lskamvrsgs
      181 lhvtmlvmhl sseeeisiav galsdskvfl ddllkgkrvd lsfqgidhfr nqvgfvnlae
      241 ndhttllkei aetmtkifqe kgimageera fnphltfmkl skstelrkqv kkidsslyed
      301 fknhyfgdei lhrfdlcsml kkkqpngyyy cessivfgek qaaepddael vslskrlven
      361 avlkavqqyl eetqnksrqt dgspakteea asdsknesdn dnsk
//
LOCUS       XP_041325808             403 aa            linear   VRT 06-MAY-2021
DEFINITION  A-kinase anchoring protein 7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325808
VERSION     XP_041325808.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469874.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="A-kinase anchoring protein 7 isoform X2"
                     /calculated_mol_wt=45459
     Region          140..337
                     /region_name="AKAP7_NLS"
                     /note="AKAP7 2'5' RNA ligase-like domain; pfam10469"
                     /db_xref="CDD:402204"
     CDS             1..403
                     /gene="AKAP7"
                     /coded_by="XM_041469874.1:121..1332"
                     /db_xref="GeneID:121354862"
ORIGIN      
        1 mrpllqrllp alcsaaaral lvrravpmal wpaegaarag gdarsaagaa pehdgleniq
       61 ekkifkedke ktqqseepca adsvdslmae mpfvdidied ecamhatsel svkkkrkrtt
      121 gremeegier kkkknkqyqp nyfislpitn pkitgsiqal qdaiiqkdqr lskamvrsgs
      181 lhvtmlvmhl sseeeisiav galsdskvfl ddllkgkrvd lsfqgidhfr nqvgfvnlae
      241 ndhttllkei aetmtkifqe kgimageera fnphltfmkl skstelrkqv kkidsslyed
      301 fknhyfgdei lhrfdlcsml kkkqpngyyy cessivfgks headlvkeal rretqallsr
      361 lnqikellts peirtkiske lfedrhnsnc kwkscinses pda
//
LOCUS       XP_041325809             237 aa            linear   VRT 06-MAY-2021
DEFINITION  myc target protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325809
VERSION     XP_041325809.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469875.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="myc target protein 1 isoform X1"
                     /calculated_mol_wt=26471
     Region          43..236
                     /region_name="Myc_target_1"
                     /note="Myc target protein 1; pfam15179"
                     /db_xref="CDD:434518"
     CDS             1..237
                     /gene="MYCT1"
                     /coded_by="XM_041469875.1:107..820"
                     /db_xref="GeneID:121354863"
ORIGIN      
        1 mlwigtvlll qshgrqsfgl clgradlyat fqldllctww ycllewlcpf askiiycllk
       61 eqitiaftvs mviglviggi iwafftclsr rrasahisqg spssfsrrsr psshghtagr
      121 tgfyrnssce rrsnlslasl tfqrqasleq ansfprkssf rastfhpflq cpplpvetns
      181 qlitltptnt tttlvgsttn slsrpefhws nnnlrichtt qtpppayeti ikafpes
//
LOCUS       XP_041325810             194 aa            linear   VRT 06-MAY-2021
DEFINITION  myc target protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325810
VERSION     XP_041325810.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469876.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..194
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..194
                     /product="myc target protein 1 isoform X2"
                     /calculated_mol_wt=21566
     Region          1..193
                     /region_name="Myc_target_1"
                     /note="Myc target protein 1; pfam15179"
                     /db_xref="CDD:434518"
     CDS             1..194
                     /gene="MYCT1"
                     /coded_by="XM_041469876.1:113..697"
                     /db_xref="GeneID:121354863"
ORIGIN      
        1 mdrnstftpi twppkfweqi tiaftvsmvi glviggiiwa fftclsrrra sahisqgsps
       61 sfsrrsrpss hghtagrtgf yrnsscerrs nlslasltfq rqasleqans fprkssfras
      121 tfhpflqcpp lpvetnsqli tltptntttt lvgsttnsls rpefhwsnnn lrichttqtp
      181 ppayetiika fpes
//
LOCUS       XP_041325811             410 aa            linear   VRT 06-MAY-2021
DEFINITION  mu-type opioid receptor isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325811
VERSION     XP_041325811.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469877.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="mu-type opioid receptor isoform X1"
                     /calculated_mol_wt=44895
     Region          81..359
                     /region_name="7tmA_Mu_opioid_R"
                     /note="opioid receptor subtype mu, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15090"
                     /db_xref="CDD:320218"
     Region          82..108
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320218"
     Region          115..141
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320218"
     Site            order(136,139..140,152..157,159..160,163,208,210..214,241,
                     244..246,248..250,252..253,305,308..309,311..312,315,
                     326..327,329..331,334,337..338)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320218"
     Region          152..182
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320218"
     Region          194..216
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320218"
     Region          241..270
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320218"
     Region          285..315
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320218"
     Region          327..352
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320218"
     CDS             1..410
                     /gene="OPRM1"
                     /coded_by="XM_041469877.1:118..1350"
                     /db_xref="GeneID:121354865"
ORIGIN      
        1 mavayllgng sapllagale vpfaanasac rppgppcpaw gnasaalgwn rsepcgggng
       61 saggggpcap agggpsvvta iaimalysvv cvvglfgnfl vmyvivrytk mktatniyif
      121 nlaladalat stlpfqsvny lmgtwpfgti lckivisidy ynmftsiftl ctmsvdryva
      181 vchpvkaldf rtprnakivn vcnwilssai glpvmfmatt kyrhgsidct ltfshpawyw
      241 enllkicvfi fafimpvlii tvcyglmilr lksvrmlsgs kekdrnlrri trmvlvvvav
      301 fivcwtpihi yviikalvni pettfqtvsw hfcialgytn sclnpvlyaf ldenfkrcfr
      361 efciptssti eqqnstrvrq ntrdhastan tvdrtnhqle lqeaettplp
//
LOCUS       XP_041325812             408 aa            linear   VRT 06-MAY-2021
DEFINITION  mu-type opioid receptor isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325812
VERSION     XP_041325812.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469878.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="mu-type opioid receptor isoform X2"
                     /calculated_mol_wt=44774
     Region          81..359
                     /region_name="7tmA_Mu_opioid_R"
                     /note="opioid receptor subtype mu, member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15090"
                     /db_xref="CDD:320218"
     Region          82..108
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320218"
     Region          115..141
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320218"
     Site            order(136,139..140,152..157,159..160,163,208,210..214,241,
                     244..246,248..250,252..253,305,308..309,311..312,315,
                     326..327,329..331,334,337..338)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320218"
     Region          152..182
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320218"
     Region          194..216
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320218"
     Region          241..270
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320218"
     Region          285..315
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320218"
     Region          327..352
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320218"
     CDS             1..408
                     /gene="OPRM1"
                     /coded_by="XM_041469878.1:118..1344"
                     /db_xref="GeneID:121354865"
ORIGIN      
        1 mavayllgng sapllagale vpfaanasac rppgppcpaw gnasaalgwn rsepcgggng
       61 saggggpcap agggpsvvta iaimalysvv cvvglfgnfl vmyvivrytk mktatniyif
      121 nlaladalat stlpfqsvny lmgtwpfgti lckivisidy ynmftsiftl ctmsvdryva
      181 vchpvkaldf rtprnakivn vcnwilssai glpvmfmatt kyrhgsidct ltfshpawyw
      241 enllkicvfi fafimpvlii tvcyglmilr lksvrmlsgs kekdrnlrri trmvlvvvav
      301 fivcwtpihi yviikalvni pettfqtvsw hfcialgytn sclnpvlyaf ldenfkrcfr
      361 efciptssti eqqnstrvrq ntrdhastan tvdrtnhqrc fpcrsftc
//
LOCUS       XP_041325814             163 aa            linear   VRT 06-MAY-2021
DEFINITION  VIP peptides isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325814
VERSION     XP_041325814.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469880.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..163
                     /product="VIP peptides isoform X1"
                     /calculated_mol_wt=18204
     Region          94..120
                     /region_name="Hormone_2"
                     /note="Peptide hormone; pfam00123"
                     /db_xref="CDD:459681"
     CDS             1..163
                     /gene="LOC121354866"
                     /coded_by="XM_041469880.1:188..679"
                     /db_xref="GeneID:121354866"
ORIGIN      
        1 mehrgaspll lalallsalc wraralpprg aafppvprlg nrmpfdgase pdhargslks
       61 eadllqntlp enekfyfdls riidssqdsp vkrhsdavft dnysrfrkqm avkkylnsvl
      121 tgkrsqeeln paklrdeael lepsfsenyd svdellshlp ldl
//
LOCUS       XP_041325815             198 aa            linear   VRT 06-MAY-2021
DEFINITION  VIP peptides isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325815
VERSION     XP_041325815.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469881.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..198
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..198
                     /product="VIP peptides isoform X2"
                     /calculated_mol_wt=22276
     Region          89..115
                     /region_name="Hormone_2"
                     /note="Peptide hormone; pfam00123"
                     /db_xref="CDD:459681"
     Region          129..155
                     /region_name="Hormone_2"
                     /note="Peptide hormone; pfam00123"
                     /db_xref="CDD:459681"
     CDS             1..198
                     /gene="LOC121354866"
                     /coded_by="XM_041469881.1:188..784"
                     /db_xref="GeneID:121354866"
ORIGIN      
        1 mehrgaspll lalallsalc wraralpprg aafppvprlg nrmpfdgase pdhargslks
       61 eadllqntlp enekfyfdls riidrnarha dgiftsvysh llaklavkry lhslirkrvs
      121 sqdspvkrhs davftdnysr frkqmavkky lnsvltgkrs qeelnpaklr deaellepsf
      181 senydsvdel lshlpldl
//
LOCUS       XP_041325816            1184 aa            linear   VRT 06-MAY-2021
DEFINITION  metabotropic glutamate receptor 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325816
VERSION     XP_041325816.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469882.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1184
                     /product="metabotropic glutamate receptor 1 isoform X1"
                     /calculated_mol_wt=131621
     Region          57..531
                     /region_name="PBP1_mGluR_groupI"
                     /note="ligand binding domain of the group I metabotropic
                     glutamate receptor; cd06374"
                     /db_xref="CDD:380597"
     Site            order(95,186,207..209,257,339,430)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380597"
     Site            order(134,137..138,141,145,194..195,197..199,220,263,266,
                     281)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380597"
     Region          542..592
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          612..861
                     /region_name="7tmC_mGluR1"
                     /note="metabotropic glutamate receptor 1 in group 1,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15449"
                     /db_xref="CDD:320565"
     Region          612..637
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(615,618..619,622..623,625..626,660,664,667..668,676,
                     680)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320565"
     Region          649..670
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(669,681..682,685..686,689,769,774,777..778,781,815,
                     818..819,822,826,832..833,836,839,843)
                     /site_type="other"
                     /note="allosteric modulator binding site [chemical
                     binding]"
                     /db_xref="CDD:320565"
     Region          679..703
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320565"
     Region          727..747
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320565"
     Region          770..796
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320565"
     Region          804..827
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320565"
     Region          830..855
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320565"
     Region          1134..1184
                     /region_name="GluR_Homer-bdg"
                     /note="Homer-binding domain of metabotropic glutamate
                     receptor; pfam10606"
                     /db_xref="CDD:431390"
     CDS             1..1184
                     /gene="GRM1"
                     /coded_by="XM_041469882.1:1..3555"
                     /db_xref="GeneID:121354867"
ORIGIN      
        1 mcrqgepmkf vtwvwmtscn kmigvllvff palllemdvl pksggrkvll saassqrsva
       61 rmdgdviiga lfsvhhqppa ekvperkcge ireqygiqrv eamfhtldki nadpvllpni
      121 tlgseirdsc whssvaleqs iefirdslis irddrdggtr cisdsqtqpq trvkkpiagv
      181 igpgsssvai qvqnllqlfd ipqiaysats idlsdktlyk yflrvvpsdt lqaramldiv
      241 krynwtyvsa vhtegnyges gmeafkelaa qeglciahsd kiysnageks fdrllrklre
      301 rlpkarvvvc fcegmtvrgi liamrrlgvl geflligsdg wadrdevieg yepeanggit
      361 iklqspevla fddyylklrl dtntrnpwfp efwqhrfqcr ipghplenpn fqknctgnes
      421 leenyvqdsk mgfvinaiya mayglqnmhh slcpghvglc damkpidgsk llefllkssf
      481 igvsgeevwf dekgdapgry dimnlqyiep nrydyvlvgt whegvlnidd yriqmnksgm
      541 vrsvcsepcl kgqikvirkg evsccwicta ckenefvqde ftckacelgw wpnadltgce
      601 pipvkylqws niesivavvf sclgilvtmf vtlifvlyrd tpvvksssre lcyiilagif
      661 lgyvcpftli akptttscyl qrllvglssa mcysalvtkt nriarilags kkkictrkpr
      721 fmsawaqvvi asilisvqlt lvitliilep pmpilsypsi kevylicnts nlgvvapvgy
      781 ngllimscty yafktrnvpa nfneakyiaf tmyttciiwl afvpiyfgsn ykiittcfav
      841 slsvtvalgc mftpkmyiii akpernvrsa fttsdvvrmh vgdgkapcks ntflnifrrk
      901 kpgagnpnsn gksvswsepg grqdpkgeht whrlsvhvkn qetgcnqtav ikpltkdyhg
      961 qsvtftdist ktlynveeed repvhlnqss spsmvvhrrv attpplqata eetqlflpeq
     1021 spktlplqpq slmdqlqgvv nkfaagipdf ntvlpppgsg ngvrppcppp ppqqlplqpf
     1081 qaaafsqepl sppaeeaese kvkliqgyvy eknteeeede epatskltle dspaltppsp
     1141 frdsvasgss vpsspvsesv lctppdvtya svilrdykqs sstl
//
LOCUS       XP_041325817             919 aa            linear   VRT 06-MAY-2021
DEFINITION  metabotropic glutamate receptor 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325817
VERSION     XP_041325817.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469883.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..919
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..919
                     /product="metabotropic glutamate receptor 1 isoform X2"
                     /calculated_mol_wt=102624
     Region          36..510
                     /region_name="PBP1_mGluR_groupI"
                     /note="ligand binding domain of the group I metabotropic
                     glutamate receptor; cd06374"
                     /db_xref="CDD:380597"
     Site            order(74,165,186..188,236,318,409)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380597"
     Site            order(113,116..117,120,124,173..174,176..178,199,242,245,
                     260)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380597"
     Region          521..571
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          591..840
                     /region_name="7tmC_mGluR1"
                     /note="metabotropic glutamate receptor 1 in group 1,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15449"
                     /db_xref="CDD:320565"
     Region          591..616
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(594,597..598,601..602,604..605,639,643,646..647,655,
                     659)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320565"
     Region          628..649
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(648,660..661,664..665,668,748,753,756..757,760,794,
                     797..798,801,805,811..812,815,818,822)
                     /site_type="other"
                     /note="allosteric modulator binding site [chemical
                     binding]"
                     /db_xref="CDD:320565"
     Region          658..682
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320565"
     Region          706..726
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320565"
     Region          749..775
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320565"
     Region          783..806
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320565"
     Region          809..834
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320565"
     CDS             1..919
                     /gene="GRM1"
                     /coded_by="XM_041469883.1:1..2760"
                     /db_xref="GeneID:121354867"
ORIGIN      
        1 migvllvffp alllemdvlp ksggrkvlls aassqrsvar mdgdviigal fsvhhqppae
       61 kvperkcgei reqygiqrve amfhtldkin adpvllpnit lgseirdscw hssvaleqsi
      121 efirdslisi rddrdggtrc isdsqtqpqt rvkkpiagvi gpgsssvaiq vqnllqlfdi
      181 pqiaysatsi dlsdktlyky flrvvpsdtl qaramldivk rynwtyvsav htegnygesg
      241 meafkelaaq eglciahsdk iysnageksf drllrklrer lpkarvvvcf cegmtvrgil
      301 iamrrlgvlg eflligsdgw adrdeviegy epeanggiti klqspevlaf ddyylklrld
      361 tntrnpwfpe fwqhrfqcri pghplenpnf qknctgnesl eenyvqdskm gfvinaiyam
      421 ayglqnmhhs lcpghvglcd amkpidgskl lefllkssfi gvsgeevwfd ekgdapgryd
      481 imnlqyiepn rydyvlvgtw hegvlniddy riqmnksgmv rsvcsepclk gqikvirkge
      541 vsccwictac kenefvqdef tckacelgww pnadltgcep ipvkylqwsn iesivavvfs
      601 clgilvtmfv tlifvlyrdt pvvksssrel cyiilagifl gyvcpftlia kptttscylq
      661 rllvglssam cysalvtktn riarilagsk kkictrkprf msawaqvvia silisvqltl
      721 vitliilepp mpilsypsik evylicntsn lgvvapvgyn gllimsctyy afktrnvpan
      781 fneakyiaft myttciiwla fvpiyfgsny kiittcfavs lsvtvalgcm ftpkmyiiia
      841 kpernvrsaf ttsdvvrmhv gdgkapcksn tflnifrrkk pgagnpnsev isrnlllpng
      901 krqpefspts qcpsahvql
//
LOCUS       XP_041325818             906 aa            linear   VRT 06-MAY-2021
DEFINITION  metabotropic glutamate receptor 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325818
VERSION     XP_041325818.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469884.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..906
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..906
                     /product="metabotropic glutamate receptor 1 isoform X3"
                     /calculated_mol_wt=101244
     Region          36..510
                     /region_name="PBP1_mGluR_groupI"
                     /note="ligand binding domain of the group I metabotropic
                     glutamate receptor; cd06374"
                     /db_xref="CDD:380597"
     Site            order(74,165,186..188,236,318,409)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:380597"
     Site            order(113,116..117,120,124,173..174,176..178,199,242,245,
                     260)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380597"
     Region          521..571
                     /region_name="NCD3G"
                     /note="Nine Cysteines Domain of family 3 GPCR; pfam07562"
                     /db_xref="CDD:462210"
     Region          591..840
                     /region_name="7tmC_mGluR1"
                     /note="metabotropic glutamate receptor 1 in group 1,
                     member of the class C family of seven-transmembrane G
                     protein-coupled receptors; cd15449"
                     /db_xref="CDD:320565"
     Region          591..616
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(594,597..598,601..602,604..605,639,643,646..647,655,
                     659)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:320565"
     Region          628..649
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320565"
     Site            order(648,660..661,664..665,668,748,753,756..757,760,794,
                     797..798,801,805,811..812,815,818,822)
                     /site_type="other"
                     /note="allosteric modulator binding site [chemical
                     binding]"
                     /db_xref="CDD:320565"
     Region          658..682
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320565"
     Region          706..726
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320565"
     Region          749..775
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320565"
     Region          783..806
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320565"
     Region          809..834
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320565"
     CDS             1..906
                     /gene="GRM1"
                     /coded_by="XM_041469884.1:1..2721"
                     /db_xref="GeneID:121354867"
ORIGIN      
        1 migvllvffp alllemdvlp ksggrkvlls aassqrsvar mdgdviigal fsvhhqppae
       61 kvperkcgei reqygiqrve amfhtldkin adpvllpnit lgseirdscw hssvaleqsi
      121 efirdslisi rddrdggtrc isdsqtqpqt rvkkpiagvi gpgsssvaiq vqnllqlfdi
      181 pqiaysatsi dlsdktlyky flrvvpsdtl qaramldivk rynwtyvsav htegnygesg
      241 meafkelaaq eglciahsdk iysnageksf drllrklrer lpkarvvvcf cegmtvrgil
      301 iamrrlgvlg eflligsdgw adrdeviegy epeanggiti klqspevlaf ddyylklrld
      361 tntrnpwfpe fwqhrfqcri pghplenpnf qknctgnesl eenyvqdskm gfvinaiyam
      421 ayglqnmhhs lcpghvglcd amkpidgskl lefllkssfi gvsgeevwfd ekgdapgryd
      481 imnlqyiepn rydyvlvgtw hegvlniddy riqmnksgmv rsvcsepclk gqikvirkge
      541 vsccwictac kenefvqdef tckacelgww pnadltgcep ipvkylqwsn iesivavvfs
      601 clgilvtmfv tlifvlyrdt pvvksssrel cyiilagifl gyvcpftlia kptttscylq
      661 rllvglssam cysalvtktn riarilagsk kkictrkprf msawaqvvia silisvqltl
      721 vitliilepp mpilsypsik evylicntsn lgvvapvgyn gllimsctyy afktrnvpan
      781 fneakyiaft myttciiwla fvpiyfgsny kiittcfavs lsvtvalgcm ftpkmyiiia
      841 kpernvrsaf ttsdvvrmhv gdgkapcksn tflnifrrkk pgagnpkkrq pefsptsqcp
      901 sahvql
//
LOCUS       XP_041325819             243 aa            linear   VRT 06-MAY-2021
DEFINITION  5'-deoxynucleotidase HDDC2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325819
VERSION     XP_041325819.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469885.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..243
                     /product="5'-deoxynucleotidase HDDC2"
                     /calculated_mol_wt=27636
     Region          64..220
                     /region_name="HD_3"
                     /note="HD domain; pfam13023"
                     /db_xref="CDD:432939"
     CDS             1..243
                     /gene="HDDC2"
                     /coded_by="XM_041469885.1:105..836"
                     /db_xref="GeneID:121354868"
ORIGIN      
        1 mnaeapelwg rgsptdtlpt rlrpgppada swqeeeeepr srpccrgpma agggvgllpf
       61 lrllgqlkrv prtgwvyrnv tkpesvsdhm yrmammalvt edkslnkdrc irlalvhdma
      121 ecivgdiapa dnipkeekhr reetamkrlt hllsedlrke ifelweeyen qstaeakfvk
      181 qldqcemilq afeyeelekt pgrlqdffds tagkfvhpei lqlvslinte rkkriaatsh
      241 phs
//
LOCUS       XP_041325820            1359 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase 5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325820
VERSION     XP_041325820.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469886.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1359
                     /product="mitogen-activated protein kinase kinase kinase
                     5"
                     /calculated_mol_wt=152458
     Region          101..136
                     /region_name="DRHyd-ASK"
                     /note="Deoxyribohydrolase (DRHyd) domain of the ASK
                     signalosome; pfam20309"
                     /db_xref="CDD:466459"
     Region          151..531
                     /region_name="MAP3K_TRAF_bd"
                     /note="MAP3K TRAFs-binding domain; pfam13281"
                     /db_xref="CDD:463827"
     Region          541..640
                     /region_name="ASK_PH"
                     /note="ASK kinase PH domain; pfam19039"
                     /db_xref="CDD:465956"
     Region          657..924
                     /region_name="STKc_ASK"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Apoptosis signal-regulating kinase; cd06624"
                     /db_xref="CDD:270794"
     Site            order(672..676,680,693,695,724,740..743,746..747,750,789,
                     791..794,796,807..808,811,825..828,830,859,868)
                     /site_type="active"
                     /db_xref="CDD:270794"
     Site            order(672..676,680,693,695,724,740..743,745..747,750,
                     793..794,796,807..809)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270794"
     Site            order(675..676,789,791..793,811,825..828,830,859,868)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270794"
     Site            807..830
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270794"
     Region          1028..1159
                     /region_name="HisK-N-like"
                     /note="HisK-N-like globin domain of the ASK signalosome;
                     pfam20302"
                     /db_xref="CDD:466452"
     CDS             1..1359
                     /gene="MAP3K5"
                     /coded_by="XM_041469886.1:1..4080"
                     /db_xref="GeneID:121354869"
ORIGIN      
        1 mndssegivs lpvpgppggg tpceevlgrr apgadtgars lppdlaappp aalwaedgaa
       61 aacpstaara kgggrrtavt yvineasqgp llaaesgalq slreaceavg aaletlhfgk
      121 ldfgetavld rfynadiavv emsdafrqps lfyhlgvres fsmanniily cdtnaeslqs
      181 lkeiifqknn mctgnyifvp ymitphnkvy ccdssfvkgl telmppgfes llgpiclplv
      241 drfiqllkva qasssqyfre silndirkar tlytgkelaa elarirqrvd nvevlsadiv
      301 inlllsyrdi qdydsivklv ktleklptfd lashhhvrlh yafalnrrnl pgdrqkalei
      361 miplveqedq vasdmyclvg riykdmfles gfidiesrdk atfwfkkafe septlpagin
      421 yavlllaagh cfdtsfelrk vgvkissllg kkgsleklqs ywevgsflga smlandhirv
      481 iqaseklfkl kapawylksi vetiliyqhf kkltpeqhta kqelvdfwmd flveatktdv
      541 tvvrfpvlil eptkiyqpsy lsinseaeek tvsiwhvlpd dkkgihewnf caasirgvsi
      601 skfeerccfl yvlhnsddfq iyfctelhcr rffdmvnsit eemgktteeg ecdgdsleyd
      661 yeydengerv ilgkgtygiv yagrdlsnqv riaikeiper dsrysqplhe eialhkhlkh
      721 knivqylgsl sengfikifm eqvpggslsa llrskwgplk nneqtigfyt kqileglkyl
      781 hdnqivhrdi kgdnvlinty sgvlkisdfg tskrlaginp ctetftgtlq ymapeiidkg
      841 prgygkaadi wslgctiiem atgkppfyel gepqaamfkv gmfkihpeip esmsaeakaf
      901 ilrcfepdpd krafahelli deflkvsskk rkspsklsvl santneylrs islpvpvlve
      961 dtsssseygs vspdtelkid pfsfktraks cgekdgkgir slflsipdeh fedhsappsp
     1021 eekdsgffml kkdserratl hriltedqeq vvrnlmealt qgaeepklkw ehittlvssl
     1081 refvrstdrk iiattlsklk leldfdshgi sqvqlvlfgf qdavnkvlrn hnikphwmfa
     1141 ldsiirkavq taitilvpel rphfslases dtadqddiev edqdeqpqnq tiqqpcivle
     1201 davatsgvst lsstvshdsq aahrslsvql grlkletnrl leelvqkere fqvllhqaie
     1261 ekdqeirnlq lrsqpidipg lsvrhrhstg tgtedpdlin wlrahgadea tinkflaedy
     1321 tltdvlcyvt rddlkclrlr ggmlctlwka itdfrekha
//
LOCUS       XP_041325821              86 aa            linear   VRT 06-MAY-2021
DEFINITION  splicing factor 3B subunit 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325821
VERSION     XP_041325821.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469887.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="splicing factor 3B subunit 5"
                     /calculated_mol_wt=9963
     Region          3..77
                     /region_name="SF3b10"
                     /note="Splicing factor 3B subunit 10 (SF3b10); pfam07189"
                     /db_xref="CDD:462114"
     CDS             1..86
                     /gene="SF3B5"
                     /coded_by="XM_041469887.1:132..392"
                     /db_xref="GeneID:121354870"
ORIGIN      
        1 mtdrytihsq lehlqskyig tghadttkwe wlvnqhrdsy csymghfdll nyfaiaenes
       61 karvrfnlme kmlqpcgppa dkpdes
//
LOCUS       XP_041325823            1383 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 23 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325823
VERSION     XP_041325823.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469889.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1383
                     /product="mediator of RNA polymerase II transcription
                     subunit 23 isoform X1"
                     /calculated_mol_wt=158005
     Region          8..1320
                     /region_name="Med23"
                     /note="Mediator complex subunit 23; pfam11573"
                     /db_xref="CDD:463299"
     CDS             1..1383
                     /gene="MED23"
                     /coded_by="XM_041469889.1:79..4230"
                     /db_xref="GeneID:121354872"
ORIGIN      
        1 maipmvpmet qlqsifeevv ktevieeafp gmfmdtpede rtklisclga frqfwsslsq
       61 esheqcvqwi vrfihsqhsp krisflydcl amavetallp prmvceslin sdtlewertq
      121 lwaltfklvr kiiggvdykg vrdllkvile kivtipntvs savvqqllaa revvayiler
      181 nacllpayfa vteirklype gklphwllgn lvsdfvdtfr ptarinsicg rcsllpvvnn
      241 sgamcnswkl dpttlrfplk gllpydkdlf epqtallryv leqpysrdmv cnmlglnkqt
      301 lniaqhkqrc pvledqlvdl vvyamerset eekfddggts qllwqhlssq liffvlfqfa
      361 sfphmvlslh qklagrglik grdhlmwvll qfisgsiqkn aladflpvmk lfdllypeke
      421 yipvpdinkp qsthafamtc iwihlnrkah sdnsklqipi phslklhhef lqqslrnksl
      481 qmndykiall cnaystnsec ftlpmgvlve tiygngnmrt plpgtncmas gsitplpmnl
      541 ldsltvhakm slihsiatrv iklahakssv alapalvety srllvymeie slgikgfisq
      601 llptvfksha wgilhtllem fsyrmhhiqp hyrvqllshl hslaavpqtn qnqlhlcves
      661 talrlitalg ssevqpqftr flndpktvls aeseelnral iltlarathv tdfftgsdsi
      721 qgtwckdilq timsftphnw ashtlscfpa plqvffkqnn vpqesrfnlk knveeeyrkw
      781 ksmtseneii thfsaqgssp lflcllwkml ldtdhinqig yrvlerigar alvahvrtfa
      841 dflvyefsts aggqqlnkci eilndmvwky nivtldrlil clamrshegn eaqvcyfiiq
      901 llllkpndfr nrvsdfvken spehwlqndw htkhmsyhkk ypeklyfegl aeqvnppvqi
      961 qpqylpiyfg nvclrflpvf divihrflel lpvsksletl ldhlgglykf hdrpvtylyn
     1021 tlhyyeghlr ertnlkrklv haiigslkdn rppgwclsdt ylkcamnpre enpwvpdday
     1081 yckligrlvd tmagkspgpf pncdwrfnef pnpaahalhv tcvelmalav pgkevgnall
     1141 nvvlksqplv prenitawmn aigliitalp epywivlhdc ivnvinspsl tsetewvgyp
     1201 fqlfdftach qsysemscsy tlalahavwh hssigqlsli pkfltealip ivktefqlly
     1261 vyhlvgpflq rfqqertrcm ieigvafyem llnadqyssh lnymdpicdf lyhmkymftg
     1321 dsvkdqveki icnlrpalkl rlrfithisk mepaavsqqp lsngspaqqp sqvpvnvalp
     1381 vtq
//
LOCUS       XP_041325824            1377 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 23 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325824
VERSION     XP_041325824.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469890.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1377
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1377
                     /product="mediator of RNA polymerase II transcription
                     subunit 23 isoform X2"
                     /calculated_mol_wt=157365
     Region          8..1314
                     /region_name="Med23"
                     /note="Mediator complex subunit 23; pfam11573"
                     /db_xref="CDD:463299"
     CDS             1..1377
                     /gene="MED23"
                     /coded_by="XM_041469890.1:79..4212"
                     /db_xref="GeneID:121354872"
ORIGIN      
        1 maipmvpmet qlqsifeevv ktevieeafp gmfmdtpede rtklisclga frqfwsslsq
       61 esheqcvqwi vrfihsqhsp krisflydcl amavetallp prmvceslin sdtlewertq
      121 lwaltfklvr kiiggvdykg vrdllkvile kivtipntvs savvqqllaa revvayiler
      181 nacllpayfa vteirklype gklphwllgn lvsdfvdtfr ptarinsicg rcsllpvvnn
      241 sgamcnswkl dpttlrfplk gllpydkdlf epqtallryv leqpysrdmv cnmlglnkqh
      301 kqrcpvledq lvdlvvyame rseteekfdd ggtsqllwqh lssqliffvl fqfasfphmv
      361 lslhqklagr glikgrdhlm wvllqfisgs iqknaladfl pvmklfdlly pekeyipvpd
      421 inkpqsthaf amtciwihln rkahsdnskl qipiphslkl hheflqqslr nkslqmndyk
      481 iallcnayst nsecftlpmg vlvetiygng nmrtplpgtn cmasgsitpl pmnlldsltv
      541 hakmslihsi atrviklaha kssvalapal vetysrllvy meieslgikg fisqllptvf
      601 kshawgilht llemfsyrmh hiqphyrvql lshlhslaav pqtnqnqlhl cvestalrli
      661 talgssevqp qftrflndpk tvlsaeseel nraliltlar athvtdfftg sdsiqgtwck
      721 dilqtimsft phnwashtls cfpaplqvff kqnnvpqesr fnlkknveee yrkwksmtse
      781 neiithfsaq gssplflcll wkmlldtdhi nqigyrvler igaralvahv rtfadflvye
      841 fstsaggqql nkcieilndm vwkynivtld rlilclamrs hegneaqvcy fiiqllllkp
      901 ndfrnrvsdf vkenspehwl qndwhtkhms yhkkypekly feglaeqvnp pvqiqpqylp
      961 iyfgnvclrf lpvfdivihr flellpvsks letlldhlgg lykfhdrpvt ylyntlhyye
     1021 ghlrertnlk rklvhaiigs lkdnrppgwc lsdtylkcam npreenpwvp ddayycklig
     1081 rlvdtmagks pgpfpncdwr fnefpnpaah alhvtcvelm alavpgkevg nallnvvlks
     1141 qplvprenit awmnaiglii talpepywiv lhdcivnvin spsltsetew vgypfqlfdf
     1201 tachqsysem scsytlalah avwhhssigq lslipkflte alipivktef qllyvyhlvg
     1261 pflqrfqqer trcmieigva fyemllnadq ysshlnymdp icdflyhmky mftgdsvkdq
     1321 vekiicnlrp alklrlrfit hiskmepaav sqqplsngsp aqqpsqvpvn valpvtq
//
LOCUS       XP_041325825            1326 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 23 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325825
VERSION     XP_041325825.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469891.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1326
                     /product="mediator of RNA polymerase II transcription
                     subunit 23 isoform X3"
                     /calculated_mol_wt=151084
     Region          8..1263
                     /region_name="Med23"
                     /note="Mediator complex subunit 23; pfam11573"
                     /db_xref="CDD:463299"
     CDS             1..1326
                     /gene="MED23"
                     /coded_by="XM_041469891.1:79..4059"
                     /db_xref="GeneID:121354872"
ORIGIN      
        1 maipmvpmet qlqsifeevv ktevieeafp gmfmdtpede rtklisclga frqfwsslsq
       61 esheqcvqwi vrfihsqhsp krisflydcl amavetallp prmvceslin sdtlewertq
      121 lwaltfklvr kiiggvdykg vrdllkvile kivtipntvs savvqqllaa revvayiler
      181 nacllpayfa vteirklype gklphwllgn lvsdfvdtfr ptarinsicg rcsllpvvnn
      241 sgamcnswkl dpttlrfplk gllpydkdlf epqtallryv leqpysrdmv cnmlglnkqt
      301 lniaqhkqrc pvledqlvdl vvyamerset eekfddggts qllwqhlssq liffvlfqfa
      361 sfphmvlslh qklagrglik grdhlmwvll qfisgsiqkn aladflpvmk lfdllypeke
      421 yipvpdinkp qsthafamtc iwihlnrkah sdnsklqipi phslklhhef lqqslrnksl
      481 qmndykiall cnaystnsec ftlpmgvlve tiygngnmrt plpgtncmas gsitplpmnl
      541 ldsltvhakm slihsiatrv iklahakssv alapalvety srllvymeie slgikgfisq
      601 llptvfksha wgilhtllem fsyrmhhiqp hyrvqllshl hslaavpqtn qnqlhlcves
      661 talrlitalg ssevqpqftr flndpktvls aeseelnral iltlarathv tdfftgsdsi
      721 qgtwckdilq timsftphnw ashtlscfpa plqvffkqnn vpqesrfnlk knveeeyrkw
      781 ksmtseneii thfsaqgssp lflcllwkml ldtdhinqig yrvlerigar alvahvrtfa
      841 dflvyefsts aggqqlnkci eilndmvwky nivtldrlil clkypeklyf eglaeqvnpp
      901 vqiqpqylpi yfgnvclrfl pvfdivihrf lellpvsksl etlldhlggl ykfhdrpvty
      961 lyntlhyyeg hlrertnlkr klvhaiigsl kdnrppgwcl sdtylkcamn preenpwvpd
     1021 dayyckligr lvdtmagksp gpfpncdwrf nefpnpaaha lhvtcvelma lavpgkevgn
     1081 allnvvlksq plvprenita wmnaigliit alpepywivl hdcivnvins psltsetewv
     1141 gypfqlfdft achqsysems csytlalaha vwhhssigql slipkfltea lipivktefq
     1201 llyvyhlvgp flqrfqqert rcmieigvaf yemllnadqy sshlnymdpi cdflyhmkym
     1261 ftgdsvkdqv ekiicnlrpa lklrlrfith iskmepaavs qqplsngspa qqpsqvpvnv
     1321 alpvtq
//
LOCUS       XP_041325826            1320 aa            linear   VRT 06-MAY-2021
DEFINITION  mediator of RNA polymerase II transcription subunit 23 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325826
VERSION     XP_041325826.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469892.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1320
                     /product="mediator of RNA polymerase II transcription
                     subunit 23 isoform X4"
                     /calculated_mol_wt=150443
     Region          8..1257
                     /region_name="Med23"
                     /note="Mediator complex subunit 23; pfam11573"
                     /db_xref="CDD:463299"
     CDS             1..1320
                     /gene="MED23"
                     /coded_by="XM_041469892.1:79..4041"
                     /db_xref="GeneID:121354872"
ORIGIN      
        1 maipmvpmet qlqsifeevv ktevieeafp gmfmdtpede rtklisclga frqfwsslsq
       61 esheqcvqwi vrfihsqhsp krisflydcl amavetallp prmvceslin sdtlewertq
      121 lwaltfklvr kiiggvdykg vrdllkvile kivtipntvs savvqqllaa revvayiler
      181 nacllpayfa vteirklype gklphwllgn lvsdfvdtfr ptarinsicg rcsllpvvnn
      241 sgamcnswkl dpttlrfplk gllpydkdlf epqtallryv leqpysrdmv cnmlglnkqh
      301 kqrcpvledq lvdlvvyame rseteekfdd ggtsqllwqh lssqliffvl fqfasfphmv
      361 lslhqklagr glikgrdhlm wvllqfisgs iqknaladfl pvmklfdlly pekeyipvpd
      421 inkpqsthaf amtciwihln rkahsdnskl qipiphslkl hheflqqslr nkslqmndyk
      481 iallcnayst nsecftlpmg vlvetiygng nmrtplpgtn cmasgsitpl pmnlldsltv
      541 hakmslihsi atrviklaha kssvalapal vetysrllvy meieslgikg fisqllptvf
      601 kshawgilht llemfsyrmh hiqphyrvql lshlhslaav pqtnqnqlhl cvestalrli
      661 talgssevqp qftrflndpk tvlsaeseel nraliltlar athvtdfftg sdsiqgtwck
      721 dilqtimsft phnwashtls cfpaplqvff kqnnvpqesr fnlkknveee yrkwksmtse
      781 neiithfsaq gssplflcll wkmlldtdhi nqigyrvler igaralvahv rtfadflvye
      841 fstsaggqql nkcieilndm vwkynivtld rlilclkype klyfeglaeq vnppvqiqpq
      901 ylpiyfgnvc lrflpvfdiv ihrflellpv sksletlldh lgglykfhdr pvtylyntlh
      961 yyeghlrert nlkrklvhai igslkdnrpp gwclsdtylk camnpreenp wvpddayyck
     1021 ligrlvdtma gkspgpfpnc dwrfnefpnp aahalhvtcv elmalavpgk evgnallnvv
     1081 lksqplvpre nitawmnaig liitalpepy wivlhdcivn vinspsltse tewvgypfql
     1141 fdftachqsy semscsytla lahavwhhss igqlslipkf ltealipivk tefqllyvyh
     1201 lvgpflqrfq qertrcmiei gvafyemlln adqysshlny mdpicdflyh mkymftgdsv
     1261 kdqvekiicn lrpalklrlr fithiskmep aavsqqplsn gspaqqpsqv pvnvalpvtq
//
LOCUS       XP_041325827            1300 aa            linear   VRT 06-MAY-2021
DEFINITION  protein broad-minded [Pyrgilauda ruficollis].
ACCESSION   XP_041325827
VERSION     XP_041325827.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469893.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1300
                     /product="protein broad-minded"
                     /calculated_mol_wt=148606
     Region          12..1297
                     /region_name="BROMI"
                     /note="Broad-minded protein; pfam14961"
                     /db_xref="CDD:464406"
     CDS             1..1300
                     /gene="TBC1D32"
                     /coded_by="XM_041469893.1:44..3946"
                     /db_xref="GeneID:121354873"
ORIGIN      
        1 mshftsedea llqsmlrqll qsvkdkitga psvecaeeil lhleetdenf hnyefvkylr
       61 qyikktvgpv ieeetekcts aqsqgeisgy dtlvqhltkk areskeyrem ihalknvmmv
      121 vveslinkfe edrmhdkeqa skakrerrsv yytdncsdsd ssfnqsyafm sqeqlqllte
      181 kldpiqpkev rqealqtlcl apasdilsse swpslskhlt isladpdatf sekilrfyak
      241 tfssspfnmt kevyislarh lelyflseey slhisagldv snsdvnrllk kvrllneyqk
      301 eapsswirhp ekymeevves tlsllslkhk pnhpaspdfl spmhflalld ikamwfkkwt
      361 hahysrrvvf kllerkyksl inaavqqcld yfefckaavn knskvsdfsq qhcsdmqnfs
      421 ytgpelqyiy fvhslcllgr lliykegqnl fpvqlknkka tvsitdvlvl faqliycsps
      481 ypktalaaht enyspeslvm eilqvfcdqt gcaaeclytd tvidallhpv qsllngtevy
      541 inclettlld vadilarias segglsllly geneknakds ptaahvlvqf tkkllhddis
      601 llsgrefmpv vkgafifvcr qmyrtceglq ilipyglhes iaeawrktsl lservptpvt
      661 dadstssisq esktsllwee tlldallnfs ttpkglfllh stdamndcvn fmfnslskki
      721 qtneyedfgn kiivtqmatt pmaavalqns gfikalvtel wallecgkdd lritqpkstp
      781 vdpidqscqk sflflvnllt ypavfellsk rdipnkpmys frevptdiid iidrliilns
      841 eakihslfny eqshvfglrl lnvlccelnt lllletqykv sqvlltaqee nvtetsegpg
      901 vfiidglsve rnhvlvrinl iggpqerilp lreldkgsgl ypwpmfssfp vpkcylaeip
      961 rkaelrqdkd ldkllkllks pdkptgwaei crkqfskvmk trpdsisgpi laeliekfvs
     1021 hlsesktdcy fstgsykamd advkkenlss vqqlgvemtv rygkylnllk edaenglcfv
     1081 lmnceeflkq qqrtvvsslc clqehyagyd wfassiflim sgdrektltf lqqfshllvs
     1141 aflwlprlhl smhlpvttve ygihpvyfcs ahhiemllka elplvcsafh msgftpsqic
     1201 lqwitqcfwn ymdwseichy iaiciflgpd yqiyicislf rhlqqdimkh teardlqvfl
     1261 keealhgfrl sdylhymegl eeiyrpmllk dmksiraqnt
//
LOCUS       XP_041325828             113 aa            linear   VRT 06-MAY-2021
DEFINITION  dynein light chain Tctex-type 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325828
VERSION     XP_041325828.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469894.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..113
                     /product="dynein light chain Tctex-type 1"
                     /calculated_mol_wt=12276
     Region          12..113
                     /region_name="DLC-like_DYNLT1"
                     /note="dynein light chain (DLC)-like domain found in
                     dynein light chain Tctex-type 1 (DYNLT1) and similar
                     proteins; cd21462"
                     /db_xref="CDD:412010"
     Site            order(62,64..70,74..84,86,90,109,111)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:412010"
     CDS             1..113
                     /gene="DYNLT1"
                     /coded_by="XM_041469894.1:86..427"
                     /db_xref="GeneID:121354874"
ORIGIN      
        1 mdefqtaeea sflvdevssi ikeaiegaig gnayqhskvn qwttsvveqt lsqltklgkp
       61 fkyivtcvim qkngaglhta sscfwdnssd gtctvrwenk tmycivsafg lal
//
LOCUS       XP_041325829             418 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 35 member F1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325829
VERSION     XP_041325829.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469895.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="solute carrier family 35 member F1"
                     /calculated_mol_wt=46292
     Region          66..365
                     /region_name="SLC35F"
                     /note="Solute carrier family 35; pfam06027"
                     /db_xref="CDD:283644"
     CDS             1..418
                     /gene="SLC35F1"
                     /coded_by="XM_041469895.1:206..1462"
                     /db_xref="GeneID:121354875"
ORIGIN      
        1 mlsperhrhh rhppppqppp pphhppqpsh vvatienlpa eggsgggrsg isapsssvrq
       61 rirkvlnrdl llsvalgqvl sllicgiglt skylsedfha ntpvfqsfln yillflvytt
      121 tlavrqgeen llailkrrww kymilgiidi eanylvvkay qyttltsvql ldcfvipvvi
      181 llswffllvr ykavhfigiv vcilgmgcma gadvlvgrqq gagenkligd llvlggatly
      241 gisnvceeyi vrnlsrvefl gmiglfgsff sgiqlaimeh kellkvpwdw qigllyvgfs
      301 acmfglysfm pvvikktsat avnlslltad lyslfcglfl fhykfsglyl lsfftilvgl
      361 mlysststyv aqdprvykqf rnpsgpvvdl passqmepsv tytslgqete eephvrva
//
LOCUS       XP_041325830            1695 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SHPRH isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325830
VERSION     XP_041325830.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469896.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1695
                     /product="E3 ubiquitin-protein ligase SHPRH isoform X1"
                     /calculated_mol_wt=194141
     Region          104..>390
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          306..>428
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            377..383
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          440..509
                     /region_name="Linker_histone"
                     /note="linker histone H1 and H5 family; pfam00538"
                     /db_xref="CDD:459846"
     Region          673..719
                     /region_name="PHD_SHPRH"
                     /note="PHD finger found in E3 ubiquitin-protein ligase
                     SHPRH; cd15547"
                     /db_xref="CDD:277022"
     Site            order(673,686..690,694,714)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277022"
     Region          <715..916
                     /region_name="DEXQc_SHPRH"
                     /note="DEXQ-box helicase domain of SHPRH; cd18070"
                     /db_xref="CDD:350828"
     Region          1441..1494
                     /region_name="RING-HC_SHPRH-like"
                     /note="RING finger, HC subclass, found in SNF2
                     histone-linker PHD finger RING finger helicase (SHPRH) and
                     similar proteins; cd16569"
                     /db_xref="CDD:438231"
     Region          1520..1645
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1549..1550,1558,1597,1618..1619)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1603..1604,1606,1629,1632)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1695
                     /gene="SHPRH"
                     /coded_by="XM_041469896.1:171..5258"
                     /db_xref="GeneID:121354876"
ORIGIN      
        1 mssrrkrapp skvdeekkkk lcwnmhedrr nemvalddev tdedhiplps tsasfivind
       61 dstdedlvqk egsgsksvkf ltvndeedsy siltpvsvql niivlpyrad rswkallgef
      121 alrlpseqil sdefrdrsft lmkgdsddel qvcvhersee eysnetkeyl gayeqrilve
      181 atlsgeileg lrwlqkkkii glyqrpgeaq alkvgiylle aglskpefls dgggrpkkan
      241 qmiqklmekf ysflipddle edeeesdmel erqnieelyd fvrhthqqdi qllrkdvqhp
      301 alipilrpyq seavnwmlhr enhtstpsse nalhflwrev itldgikiyy npftgciire
      361 yptagpqwpg gilademglg ktvevlalil nhpgpeikqd dltlpegklv nffvppqple
      421 gnkkkktkem epklkekiqy pslrvmilaa vkemnvkkga siiaifkyis siyrydtqrn
      481 rrllkrtlek liaeqvveqv kghglagsfk lgknykeqkk rerakeqvar tsestqkkql
      541 idaktqtkes rnsaetsenv fktashenia meehdyctts knnrkseadn ensveeknvk
      601 qetvlpkspd fhgnllvssd tsshpdvdvs ettaviqqev pkvqsshsqe ragssvqhts
      661 svfpfntsey rfecicgelg ladykarvqc lkcylwqhae cvnykeenlk srpfycphcl
      721 vamkpvptga tliispssic hqwvdeinrh vrssslrvlv yqgvkkhgfl qphmlaeqev
      781 vittydvlrt elnyvdiphs nsedgrrfrn qkrymaipsp lvavewwric ldeaqmvect
      841 takaaemalr lsginrwcvs gtpvqrgled lyglvlflgv dpywvkhwwd qllyrpycrk
      901 npqplyslia kimwrsakkd vldqiqippq tenihwlhfs pverhfyhrq hevccqdala
      961 klrkisdwtl klssldrrtv tsilypllrl rqacchpqav rgeflplqks tmtmeellas
     1021 lqkkcrtece eahrqlvcal nglagihiik geyalaaely revlrsseeh keklktdslq
     1081 rlhsthnlme llakhpgipp tlrdsrlaee aeqlrqhyms ksnaevaeah qalqpvlqti
     1141 relqrkihsg spwwldviqt aiqyaideel vqrvqneitc nykqetskls maekfrdcrg
     1201 lqyllttqld evkkfqkivr eavknlegpp skqvieaati chlrpvrlpl nncvfckade
     1261 lfteyesklf mhsvkgqmai feemiedqeg lvddrlptts rglwatsete ralkallsfa
     1321 kahrmdirvt eegsaflelf eawkkeykll heywmvlrdh vsaidelama terlrvrhpd
     1381 epkpnppvlh iiepheveqn rvkllndkav aksqlqkklg qllyltnlek sqdkttggvn
     1441 pepcpicarq lgrqwavltc ghcfcnecia iiiqqysvgt rrssikcaic rqttshkeis
     1501 yvftaeaanq eddipvkgsh stkveavvrt lkkiqfkdpg akslvfstwq dvldiiskal
     1561 ydnnmvfsqi ngiskfqenl safkydpnin illlplhtgs nglniieath vllvepilnp
     1621 ahelqaigrv hrigqtksti vhrflikati eermqtmlkt vdrshtsssm kqseasvltv
     1681 adladlftee teele
//
LOCUS       XP_041325832            1695 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SHPRH isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325832
VERSION     XP_041325832.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469898.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1695
                     /product="E3 ubiquitin-protein ligase SHPRH isoform X1"
                     /calculated_mol_wt=194141
     Region          104..>390
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          306..>428
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            377..383
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          440..509
                     /region_name="Linker_histone"
                     /note="linker histone H1 and H5 family; pfam00538"
                     /db_xref="CDD:459846"
     Region          673..719
                     /region_name="PHD_SHPRH"
                     /note="PHD finger found in E3 ubiquitin-protein ligase
                     SHPRH; cd15547"
                     /db_xref="CDD:277022"
     Site            order(673,686..690,694,714)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277022"
     Region          <715..916
                     /region_name="DEXQc_SHPRH"
                     /note="DEXQ-box helicase domain of SHPRH; cd18070"
                     /db_xref="CDD:350828"
     Region          1441..1494
                     /region_name="RING-HC_SHPRH-like"
                     /note="RING finger, HC subclass, found in SNF2
                     histone-linker PHD finger RING finger helicase (SHPRH) and
                     similar proteins; cd16569"
                     /db_xref="CDD:438231"
     Region          1520..1645
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1549..1550,1558,1597,1618..1619)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1603..1604,1606,1629,1632)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1695
                     /gene="SHPRH"
                     /coded_by="XM_041469898.1:163..5250"
                     /db_xref="GeneID:121354876"
ORIGIN      
        1 mssrrkrapp skvdeekkkk lcwnmhedrr nemvalddev tdedhiplps tsasfivind
       61 dstdedlvqk egsgsksvkf ltvndeedsy siltpvsvql niivlpyrad rswkallgef
      121 alrlpseqil sdefrdrsft lmkgdsddel qvcvhersee eysnetkeyl gayeqrilve
      181 atlsgeileg lrwlqkkkii glyqrpgeaq alkvgiylle aglskpefls dgggrpkkan
      241 qmiqklmekf ysflipddle edeeesdmel erqnieelyd fvrhthqqdi qllrkdvqhp
      301 alipilrpyq seavnwmlhr enhtstpsse nalhflwrev itldgikiyy npftgciire
      361 yptagpqwpg gilademglg ktvevlalil nhpgpeikqd dltlpegklv nffvppqple
      421 gnkkkktkem epklkekiqy pslrvmilaa vkemnvkkga siiaifkyis siyrydtqrn
      481 rrllkrtlek liaeqvveqv kghglagsfk lgknykeqkk rerakeqvar tsestqkkql
      541 idaktqtkes rnsaetsenv fktashenia meehdyctts knnrkseadn ensveeknvk
      601 qetvlpkspd fhgnllvssd tsshpdvdvs ettaviqqev pkvqsshsqe ragssvqhts
      661 svfpfntsey rfecicgelg ladykarvqc lkcylwqhae cvnykeenlk srpfycphcl
      721 vamkpvptga tliispssic hqwvdeinrh vrssslrvlv yqgvkkhgfl qphmlaeqev
      781 vittydvlrt elnyvdiphs nsedgrrfrn qkrymaipsp lvavewwric ldeaqmvect
      841 takaaemalr lsginrwcvs gtpvqrgled lyglvlflgv dpywvkhwwd qllyrpycrk
      901 npqplyslia kimwrsakkd vldqiqippq tenihwlhfs pverhfyhrq hevccqdala
      961 klrkisdwtl klssldrrtv tsilypllrl rqacchpqav rgeflplqks tmtmeellas
     1021 lqkkcrtece eahrqlvcal nglagihiik geyalaaely revlrsseeh keklktdslq
     1081 rlhsthnlme llakhpgipp tlrdsrlaee aeqlrqhyms ksnaevaeah qalqpvlqti
     1141 relqrkihsg spwwldviqt aiqyaideel vqrvqneitc nykqetskls maekfrdcrg
     1201 lqyllttqld evkkfqkivr eavknlegpp skqvieaati chlrpvrlpl nncvfckade
     1261 lfteyesklf mhsvkgqmai feemiedqeg lvddrlptts rglwatsete ralkallsfa
     1321 kahrmdirvt eegsaflelf eawkkeykll heywmvlrdh vsaidelama terlrvrhpd
     1381 epkpnppvlh iiepheveqn rvkllndkav aksqlqkklg qllyltnlek sqdkttggvn
     1441 pepcpicarq lgrqwavltc ghcfcnecia iiiqqysvgt rrssikcaic rqttshkeis
     1501 yvftaeaanq eddipvkgsh stkveavvrt lkkiqfkdpg akslvfstwq dvldiiskal
     1561 ydnnmvfsqi ngiskfqenl safkydpnin illlplhtgs nglniieath vllvepilnp
     1621 ahelqaigrv hrigqtksti vhrflikati eermqtmlkt vdrshtsssm kqseasvltv
     1681 adladlftee teele
//
LOCUS       XP_041325833            1693 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SHPRH isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325833
VERSION     XP_041325833.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469899.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1693
                     /product="E3 ubiquitin-protein ligase SHPRH isoform X2"
                     /calculated_mol_wt=193966
     Region          104..>388
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          306..>426
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            375..381
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          438..507
                     /region_name="Linker_histone"
                     /note="linker histone H1 and H5 family; pfam00538"
                     /db_xref="CDD:459846"
     Region          671..717
                     /region_name="PHD_SHPRH"
                     /note="PHD finger found in E3 ubiquitin-protein ligase
                     SHPRH; cd15547"
                     /db_xref="CDD:277022"
     Site            order(671,684..688,692,712)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277022"
     Region          <713..914
                     /region_name="DEXQc_SHPRH"
                     /note="DEXQ-box helicase domain of SHPRH; cd18070"
                     /db_xref="CDD:350828"
     Region          1439..1492
                     /region_name="RING-HC_SHPRH-like"
                     /note="RING finger, HC subclass, found in SNF2
                     histone-linker PHD finger RING finger helicase (SHPRH) and
                     similar proteins; cd16569"
                     /db_xref="CDD:438231"
     Region          1518..1643
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1547..1548,1556,1595,1616..1617)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1601..1602,1604,1627,1630)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1693
                     /gene="SHPRH"
                     /coded_by="XM_041469899.1:171..5252"
                     /db_xref="GeneID:121354876"
ORIGIN      
        1 mssrrkrapp skvdeekkkk lcwnmhedrr nemvalddev tdedhiplps tsasfivind
       61 dstdedlvqk egsgsksvkf ltvndeedsy siltpvsvql niivlpyrad rswkallgef
      121 alrlpseqil sdefrdrsft lmkgdsddel qvcvhersee eysnetkeyl gayeqrilve
      181 atlsgeileg lrwlqkkkii glyqrpgeaq alkvgiylle aglskpefls dgggrpkkan
      241 qmiqklmekf ysflipddle edeeesdmel erqnieelyd fvrhthqqdi qllrkdvqhp
      301 alipilrpyq seavnwmlhr enhtstpkna lhflwrevit ldgikiyynp ftgciireyp
      361 tagpqwpggi lademglgkt vevlalilnh pgpeikqddl tlpegklvnf fvppqplegn
      421 kkkktkemep klkekiqyps lrvmilaavk emnvkkgasi iaifkyissi yrydtqrnrr
      481 llkrtlekli aeqvveqvkg hglagsfklg knykeqkkre rakeqvarts estqkkqlid
      541 aktqtkesrn saetsenvfk tasheniame ehdycttskn nrkseadnen sveeknvkqe
      601 tvlpkspdfh gnllvssdts shpdvdvset taviqqevpk vqsshsqera gssvqhtssv
      661 fpfntseyrf ecicgelgla dykarvqclk cylwqhaecv nykeenlksr pfycphclva
      721 mkpvptgatl iispssichq wvdeinrhvr ssslrvlvyq gvkkhgflqp hmlaeqevvi
      781 ttydvlrtel nyvdiphsns edgrrfrnqk rymaipsplv avewwricld eaqmvectta
      841 kaaemalrls ginrwcvsgt pvqrgledly glvlflgvdp ywvkhwwdql lyrpycrknp
      901 qplysliaki mwrsakkdvl dqiqippqte nihwlhfspv erhfyhrqhe vccqdalakl
      961 rkisdwtlkl ssldrrtvts ilypllrlrq acchpqavrg eflplqkstm tmeellaslq
     1021 kkcrteceea hrqlvcalng lagihiikge yalaaelyre vlrsseehke klktdslqrl
     1081 hsthnlmell akhpgipptl rdsrlaeeae qlrqhymsks naevaeahqa lqpvlqtire
     1141 lqrkihsgsp wwldviqtai qyaideelvq rvqneitcny kqetsklsma ekfrdcrglq
     1201 yllttqldev kkfqkivrea vknlegppsk qvieaatich lrpvrlplnn cvfckadelf
     1261 teyesklfmh svkgqmaife emiedqeglv ddrlpttsrg lwatsetera lkallsfaka
     1321 hrmdirvtee gsaflelfea wkkeykllhe ywmvlrdhvs aidelamate rlrvrhpdep
     1381 kpnppvlhii epheveqnrv kllndkavak sqlqkklgql lyltnleksq dkttggvnpe
     1441 pcpicarqlg rqwavltcgh cfcneciaii iqqysvgtrr ssikcaicrq ttshkeisyv
     1501 ftaeaanqed dipvkgshst kveavvrtlk kiqfkdpgak slvfstwqdv ldiiskalyd
     1561 nnmvfsqing iskfqenlsa fkydpninil llplhtgsng lniieathvl lvepilnpah
     1621 elqaigrvhr igqtkstivh rflikatiee rmqtmlktvd rshtsssmkq seasvltvad
     1681 ladlfteete ele
//
LOCUS       XP_041325834            1689 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SHPRH isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325834
VERSION     XP_041325834.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469900.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1689
                     /product="E3 ubiquitin-protein ligase SHPRH isoform X3"
                     /calculated_mol_wt=193447
     Region          104..>390
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          306..>428
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            377..383
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          440..509
                     /region_name="Linker_histone"
                     /note="linker histone H1 and H5 family; pfam00538"
                     /db_xref="CDD:459846"
     Region          673..719
                     /region_name="PHD_SHPRH"
                     /note="PHD finger found in E3 ubiquitin-protein ligase
                     SHPRH; cd15547"
                     /db_xref="CDD:277022"
     Site            order(673,686..690,694,714)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277022"
     Region          <715..916
                     /region_name="DEXQc_SHPRH"
                     /note="DEXQ-box helicase domain of SHPRH; cd18070"
                     /db_xref="CDD:350828"
     Region          1441..1494
                     /region_name="RING-HC_SHPRH-like"
                     /note="RING finger, HC subclass, found in SNF2
                     histone-linker PHD finger RING finger helicase (SHPRH) and
                     similar proteins; cd16569"
                     /db_xref="CDD:438231"
     Region          1520..1637
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1549..1550,1558,1597,1618..1619)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1603..1604,1606,1629,1632)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1689
                     /gene="SHPRH"
                     /coded_by="XM_041469900.1:171..5240"
                     /db_xref="GeneID:121354876"
ORIGIN      
        1 mssrrkrapp skvdeekkkk lcwnmhedrr nemvalddev tdedhiplps tsasfivind
       61 dstdedlvqk egsgsksvkf ltvndeedsy siltpvsvql niivlpyrad rswkallgef
      121 alrlpseqil sdefrdrsft lmkgdsddel qvcvhersee eysnetkeyl gayeqrilve
      181 atlsgeileg lrwlqkkkii glyqrpgeaq alkvgiylle aglskpefls dgggrpkkan
      241 qmiqklmekf ysflipddle edeeesdmel erqnieelyd fvrhthqqdi qllrkdvqhp
      301 alipilrpyq seavnwmlhr enhtstpsse nalhflwrev itldgikiyy npftgciire
      361 yptagpqwpg gilademglg ktvevlalil nhpgpeikqd dltlpegklv nffvppqple
      421 gnkkkktkem epklkekiqy pslrvmilaa vkemnvkkga siiaifkyis siyrydtqrn
      481 rrllkrtlek liaeqvveqv kghglagsfk lgknykeqkk rerakeqvar tsestqkkql
      541 idaktqtkes rnsaetsenv fktashenia meehdyctts knnrkseadn ensveeknvk
      601 qetvlpkspd fhgnllvssd tsshpdvdvs ettaviqqev pkvqsshsqe ragssvqhts
      661 svfpfntsey rfecicgelg ladykarvqc lkcylwqhae cvnykeenlk srpfycphcl
      721 vamkpvptga tliispssic hqwvdeinrh vrssslrvlv yqgvkkhgfl qphmlaeqev
      781 vittydvlrt elnyvdiphs nsedgrrfrn qkrymaipsp lvavewwric ldeaqmvect
      841 takaaemalr lsginrwcvs gtpvqrgled lyglvlflgv dpywvkhwwd qllyrpycrk
      901 npqplyslia kimwrsakkd vldqiqippq tenihwlhfs pverhfyhrq hevccqdala
      961 klrkisdwtl klssldrrtv tsilypllrl rqacchpqav rgeflplqks tmtmeellas
     1021 lqkkcrtece eahrqlvcal nglagihiik geyalaaely revlrsseeh keklktdslq
     1081 rlhsthnlme llakhpgipp tlrdsrlaee aeqlrqhyms ksnaevaeah qalqpvlqti
     1141 relqrkihsg spwwldviqt aiqyaideel vqrvqneitc nykqetskls maekfrdcrg
     1201 lqyllttqld evkkfqkivr eavknlegpp skqvieaati chlrpvrlpl nncvfckade
     1261 lfteyesklf mhsvkgqmai feemiedqeg lvddrlptts rglwatsete ralkallsfa
     1321 kahrmdirvt eegsaflelf eawkkeykll heywmvlrdh vsaidelama terlrvrhpd
     1381 epkpnppvlh iiepheveqn rvkllndkav aksqlqkklg qllyltnlek sqdkttggvn
     1441 pepcpicarq lgrqwavltc ghcfcnecia iiiqqysvgt rrssikcaic rqttshkeis
     1501 yvftaeaanq eddipvkgsh stkveavvrt lkkiqfkdpg akslvfstwq dvldiiskal
     1561 ydnnmvfsqi ngiskfqenl safkydpnin illlplhtgs nglniieath vllvepilnp
     1621 ahelqaigrv hrigqtkfli katieermqt mlktvdrsht sssmkqseas vltvadladl
     1681 fteeteele
//
LOCUS       XP_041325835            1665 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SHPRH isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325835
VERSION     XP_041325835.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469901.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1665
                     /product="E3 ubiquitin-protein ligase SHPRH isoform X4"
                     /calculated_mol_wt=190706
     Region          85..>390
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          306..>428
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            377..383
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          440..509
                     /region_name="Linker_histone"
                     /note="linker histone H1 and H5 family; pfam00538"
                     /db_xref="CDD:459846"
     Region          673..719
                     /region_name="PHD_SHPRH"
                     /note="PHD finger found in E3 ubiquitin-protein ligase
                     SHPRH; cd15547"
                     /db_xref="CDD:277022"
     Site            order(673,686..690,694,714)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277022"
     Region          <715..916
                     /region_name="DEXQc_SHPRH"
                     /note="DEXQ-box helicase domain of SHPRH; cd18070"
                     /db_xref="CDD:350828"
     Region          1441..1494
                     /region_name="RING-HC_SHPRH-like"
                     /note="RING finger, HC subclass, found in SNF2
                     histone-linker PHD finger RING finger helicase (SHPRH) and
                     similar proteins; cd16569"
                     /db_xref="CDD:438231"
     Region          1520..1637
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1549..1550,1558,1597,1618..1619)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1603..1604,1606,1629,1632)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1665
                     /gene="SHPRH"
                     /coded_by="XM_041469901.1:171..5168"
                     /db_xref="GeneID:121354876"
ORIGIN      
        1 mssrrkrapp skvdeekkkk lcwnmhedrr nemvalddev tdedhiplps tsasfivind
       61 dstdedlvqk egsgsksvkf ltvndeedsy siltpvsvql niivlpyrad rswkallgef
      121 alrlpseqil sdefrdrsft lmkgdsddel qvcvhersee eysnetkeyl gayeqrilve
      181 atlsgeileg lrwlqkkkii glyqrpgeaq alkvgiylle aglskpefls dgggrpkkan
      241 qmiqklmekf ysflipddle edeeesdmel erqnieelyd fvrhthqqdi qllrkdvqhp
      301 alipilrpyq seavnwmlhr enhtstpsse nalhflwrev itldgikiyy npftgciire
      361 yptagpqwpg gilademglg ktvevlalil nhpgpeikqd dltlpegklv nffvppqple
      421 gnkkkktkem epklkekiqy pslrvmilaa vkemnvkkga siiaifkyis siyrydtqrn
      481 rrllkrtlek liaeqvveqv kghglagsfk lgknykeqkk rerakeqvar tsestqkkql
      541 idaktqtkes rnsaetsenv fktashenia meehdyctts knnrkseadn ensveeknvk
      601 qetvlpkspd fhgnllvssd tsshpdvdvs ettaviqqev pkvqsshsqe ragssvqhts
      661 svfpfntsey rfecicgelg ladykarvqc lkcylwqhae cvnykeenlk srpfycphcl
      721 vamkpvptga tliispssic hqwvdeinrh vrssslrvlv yqgvkkhgfl qphmlaeqev
      781 vittydvlrt elnyvdiphs nsedgrrfrn qkrymaipsp lvavewwric ldeaqmvect
      841 takaaemalr lsginrwcvs gtpvqrgled lyglvlflgv dpywvkhwwd qllyrpycrk
      901 npqplyslia kimwrsakkd vldqiqippq tenihwlhfs pverhfyhrq hevccqdala
      961 klrkisdwtl klssldrrtv tsilypllrl rqacchpqav rgeflplqks tmtmeellas
     1021 lqkkcrtece eahrqlvcal nglagihiik geyalaaely revlrsseeh keklktdslq
     1081 rlhsthnlme llakhpgipp tlrdsrlaee aeqlrqhyms ksnaevaeah qalqpvlqti
     1141 relqrkihsg spwwldviqt aiqyaideel vqrvqneitc nykqetskls maekfrdcrg
     1201 lqyllttqld evkkfqkivr eavknlegpp skqvieaati chlrpvrlpl nncvfckade
     1261 lfteyesklf mhsvkgqmai feemiedqeg lvddrlptts rglwatsete ralkallsfa
     1321 kahrmdirvt eegsaflelf eawkkeykll heywmvlrdh vsaidelama terlrvrhpd
     1381 epkpnppvlh iiepheveqn rvkllndkav aksqlqkklg qllyltnlek sqdkttggvn
     1441 pepcpicarq lgrqwavltc ghcfcnecia iiiqqysvgt rrssikcaic rqttshkeis
     1501 yvftaeaanq eddipvkgsh stkveavvrt lkkiqfkdpg akslvfstwq dvldiiskal
     1561 ydnnmvfsqi ngiskfqenl safkydpnin illlplhtgs nglniieath vllvepilnp
     1621 ahelqaigrv hrigqtkgrp lpvnpkafpl hssvkcylpk fqpkt
//
LOCUS       XP_041325836            1664 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase SHPRH isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325836
VERSION     XP_041325836.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469902.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1664
                     /product="E3 ubiquitin-protein ligase SHPRH isoform X5"
                     /calculated_mol_wt=190799
     Region          104..>390
                     /region_name="HepA"
                     /note="Superfamily II DNA or RNA helicase, SNF2 family
                     [Transcription, Replication, recombination, and repair];
                     COG0553"
                     /db_xref="CDD:440319"
     Region          306..>428
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            377..383
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          440..509
                     /region_name="Linker_histone"
                     /note="linker histone H1 and H5 family; pfam00538"
                     /db_xref="CDD:459846"
     Region          673..719
                     /region_name="PHD_SHPRH"
                     /note="PHD finger found in E3 ubiquitin-protein ligase
                     SHPRH; cd15547"
                     /db_xref="CDD:277022"
     Site            order(673,686..690,694,714)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277022"
     Region          <715..916
                     /region_name="DEXQc_SHPRH"
                     /note="DEXQ-box helicase domain of SHPRH; cd18070"
                     /db_xref="CDD:350828"
     Region          1441..1494
                     /region_name="RING-HC_SHPRH-like"
                     /note="RING finger, HC subclass, found in SNF2
                     histone-linker PHD finger RING finger helicase (SHPRH) and
                     similar proteins; cd16569"
                     /db_xref="CDD:438231"
     Region          <1518..1614
                     /region_name="SF2_C_SNF"
                     /note="C-terminal helicase domain of the SNF family
                     helicases; cd18793"
                     /db_xref="CDD:350180"
     Site            order(1518..1519,1527,1566,1587..1588)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350180"
     Site            order(1572..1573,1575,1598,1601)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350180"
     CDS             1..1664
                     /gene="SHPRH"
                     /coded_by="XM_041469902.1:171..5165"
                     /db_xref="GeneID:121354876"
ORIGIN      
        1 mssrrkrapp skvdeekkkk lcwnmhedrr nemvalddev tdedhiplps tsasfivind
       61 dstdedlvqk egsgsksvkf ltvndeedsy siltpvsvql niivlpyrad rswkallgef
      121 alrlpseqil sdefrdrsft lmkgdsddel qvcvhersee eysnetkeyl gayeqrilve
      181 atlsgeileg lrwlqkkkii glyqrpgeaq alkvgiylle aglskpefls dgggrpkkan
      241 qmiqklmekf ysflipddle edeeesdmel erqnieelyd fvrhthqqdi qllrkdvqhp
      301 alipilrpyq seavnwmlhr enhtstpsse nalhflwrev itldgikiyy npftgciire
      361 yptagpqwpg gilademglg ktvevlalil nhpgpeikqd dltlpegklv nffvppqple
      421 gnkkkktkem epklkekiqy pslrvmilaa vkemnvkkga siiaifkyis siyrydtqrn
      481 rrllkrtlek liaeqvveqv kghglagsfk lgknykeqkk rerakeqvar tsestqkkql
      541 idaktqtkes rnsaetsenv fktashenia meehdyctts knnrkseadn ensveeknvk
      601 qetvlpkspd fhgnllvssd tsshpdvdvs ettaviqqev pkvqsshsqe ragssvqhts
      661 svfpfntsey rfecicgelg ladykarvqc lkcylwqhae cvnykeenlk srpfycphcl
      721 vamkpvptga tliispssic hqwvdeinrh vrssslrvlv yqgvkkhgfl qphmlaeqev
      781 vittydvlrt elnyvdiphs nsedgrrfrn qkrymaipsp lvavewwric ldeaqmvect
      841 takaaemalr lsginrwcvs gtpvqrgled lyglvlflgv dpywvkhwwd qllyrpycrk
      901 npqplyslia kimwrsakkd vldqiqippq tenihwlhfs pverhfyhrq hevccqdala
      961 klrkisdwtl klssldrrtv tsilypllrl rqacchpqav rgeflplqks tmtmeellas
     1021 lqkkcrtece eahrqlvcal nglagihiik geyalaaely revlrsseeh keklktdslq
     1081 rlhsthnlme llakhpgipp tlrdsrlaee aeqlrqhyms ksnaevaeah qalqpvlqti
     1141 relqrkihsg spwwldviqt aiqyaideel vqrvqneitc nykqetskls maekfrdcrg
     1201 lqyllttqld evkkfqkivr eavknlegpp skqvieaati chlrpvrlpl nncvfckade
     1261 lfteyesklf mhsvkgqmai feemiedqeg lvddrlptts rglwatsete ralkallsfa
     1321 kahrmdirvt eegsaflelf eawkkeykll heywmvlrdh vsaidelama terlrvrhpd
     1381 epkpnppvlh iiepheveqn rvkllndkav aksqlqkklg qllyltnlek sqdkttggvn
     1441 pepcpicarq lgrqwavltc ghcfcnecia iiiqqysvgt rrssikcaic rqttshkeis
     1501 yvftaeaanq eddipvkwqd vldiiskaly dnnmvfsqin giskfqenls afkydpnini
     1561 lllplhtgsn glniieathv llvepilnpa helqaigrvh rigqtkstiv hrflikatie
     1621 ermqtmlktv drshtsssmk qseasvltva dladlfteet eele
//
LOCUS       XP_041325837             210 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein D53 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325837
VERSION     XP_041325837.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469903.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="tumor protein D53 isoform X1"
                     /calculated_mol_wt=23042
     Region          44..156
                     /region_name="TPD52"
                     /note="Tumour protein D52 family; pfam04201"
                     /db_xref="CDD:461225"
     CDS             1..210
                     /gene="TPD52L1"
                     /coded_by="XM_041469903.1:51..683"
                     /db_xref="GeneID:121354877"
ORIGIN      
        1 mepqarglle tqsfheaded vvadvdftnm iseeekeelk ielakledei stlrqvlaak
       61 ekhlveikqk lgislmnelk qnfskswhdm qttsaykkth etlshagqka taaisnvgta
      121 iskkfgdmrs hsigysirhs ismpamrnsp tfksfeekve ttvtslktkv ggtshtggsf
      181 eevlsstaha saqsslagtr lpeseeelqc
//
LOCUS       XP_041325838             205 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein D53 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325838
VERSION     XP_041325838.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469904.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="tumor protein D53 isoform X2"
                     /calculated_mol_wt=22491
     Region          44..151
                     /region_name="TPD52"
                     /note="Tumour protein D52 family; pfam04201"
                     /db_xref="CDD:461225"
     CDS             1..205
                     /gene="TPD52L1"
                     /coded_by="XM_041469904.1:51..668"
                     /db_xref="GeneID:121354877"
ORIGIN      
        1 mepqarglle tqsfheaded vvadvdftnm iseeekeelk ielakledei stlrqvlaak
       61 ekhlveikqk lgislmnelk qnfskswhdm qttsaykkth etlshagqka taaisnvgta
      121 iskkfgdmsy sirhsismpa mrnsptfksf eekvettvts lktkvggtsh tggsfeevls
      181 stahasaqss lagtrlpese eelqc
//
LOCUS       XP_041325839             142 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor protein D53 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325839
VERSION     XP_041325839.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469905.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..142
                     /product="tumor protein D53 isoform X3"
                     /calculated_mol_wt=15877
     Region          44..131
                     /region_name="TPD52"
                     /note="Tumour protein D52 family; pfam04201"
                     /db_xref="CDD:461225"
     CDS             1..142
                     /gene="TPD52L1"
                     /coded_by="XM_041469905.1:51..479"
                     /db_xref="GeneID:121354877"
ORIGIN      
        1 mepqarglle tqsfheaded vvadvdftnm iseeekeelk ielakledei stlrqvlaak
       61 ekhlveikqk lgislmnelk qnfskswhdm qttsaykkth etlshagqka taaisnvgta
      121 iskkfgdmsy sirhsismpa mr
//
LOCUS       XP_041325840             600 aa            linear   VRT 06-MAY-2021
DEFINITION  muscarinic acetylcholine receptor M3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325840
VERSION     XP_041325840.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469906.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..600
                     /product="muscarinic acetylcholine receptor M3"
                     /calculated_mol_wt=67631
     Region          75..>279
                     /region_name="7tmA_mAChR_M3"
                     /note="muscarinic acetylcholine receptor subtype M3,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15299"
                     /db_xref="CDD:320426"
     Region          79..105
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320426"
     Region          112..139
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320426"
     Region          150..180
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320426"
     Region          192..215
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320426"
     Region          237..266
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320426"
     Region          <495..574
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          501..523
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          533..558
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..600
                     /gene="CHRM3"
                     /coded_by="XM_041469906.1:135..1937"
                     /db_xref="GeneID:121354878"
ORIGIN      
        1 mimhnnssss lllpnvssfw krdshgpgll deaasligsy dfpqttesfp fstvestnmt
       61 lnatskdplg ghtiwqvvli afltgilalv tiignilviv afkvnkqlkt vnnyfllsla
      121 cadliigvls mnlyttyiim dhwalgslac dlwlsidyva snasvmnllv isfdryfsit
      181 rpltyrakrt tkragvmigl awivsfvlwa pailfwqyfv gertvppdec fiqflsepii
      241 tfgtaiaafy lpvtimsily wriyketekr tkelaglqas gseaeaarfv hqtgssrscs
      301 syelqrqnmk rstrkkyrrc hfwltmkswe pstdqgdqeh sssdswnnnd aaaslensas
      361 sdeediaaet raiysivlkl pghsailnst klpssedlhe sgdelqksdt eskekkpkkl
      421 hppkgvqdgg nfqksftklp iepeseettt asdgissvtk tstalplsfk eatlakkfal
      481 ktrsqitkrk rmslikekka aqtlsailfa fiitwtpyni mvlvntfcsc ipktfwhlgy
      541 wlcyinstvn pmcyalcnkt frntfkmlll cqcdkrkrrk qqyqqrqsvi fhkripreas
//
LOCUS       XP_041325842             674 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: T-cell activation Rho GTPase-activating
            protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325842
VERSION     XP_041325842.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469908.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 3 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..674
                     /product="LOW QUALITY PROTEIN: T-cell activation Rho
                     GTPase-activating protein"
                     /calculated_mol_wt=74994
     Region          87..>198
                     /region_name="RhoGAP"
                     /note="GTPase-activator protein (GAP) for Rho-like
                     GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases.
                     Small GTPases (G proteins) cluster into distinct families,
                     and all act as molecular switches, active in their
                     GTP-bound form but inactive when bound to...; cl02570"
                     /db_xref="CDD:470621"
     Site            125
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238090"
     CDS             1..674
                     /gene="LOC121354879"
                     /coded_by="XM_041469908.1:158..2182"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 3 bases at 3
                     genomic stop codons"
                     /db_xref="GeneID:121354879"
ORIGIN      
        1 mkvlsscnts ktlnagnmes liecqteada kkcpmsvpad tedrlclsna dgtkkrkkvi
       61 sqsftlrqsl tkrnssgqld lgtkitlfgh plalicgedd tlpqpvqdll ailymkgpst
      121 egifrktane karkelkedl nkggnvdlks ksvhllavvl kdflrnipsk llsadlyekw
      181 mqalekpskq ekieelkexv fqpgnfatsa nvmerlvean svfrnqdthl kacpsyqvai
      241 apwgllxrap aaalpepsse isvxfsfils wsvktnvcfl pteqlcaahq ndsaydspdp
      301 eaecspcase mkqtkgrsat vsrkhptnis apsltnfrnd istmdrryse sdlsfqncld
      361 dtirkqrlnk sednfpvqqk llwmealeer laglpsqlst dslpktsssc slessdgsvf
      421 tssplvspss pkktflnrpq sfstkatedc stpsreikkh smsfsfanrr ktliktqswg
      481 pgkpmffqrd sftkkedhfs crivqegsrn ddkllpveyq qrprlrsvde vfrevdqenp
      541 rrppsyeeav kncpattvps qnltvqtlrl aasnqdvllp hpcshsaqdt aymdlrdlrk
      601 arvsatkdsd metetfsisv gvnsrvnlpv tpgvyrmram sescqknkle yvarrcsqpv
      661 feveqiqyak esyv
//
LOCUS       XP_041325843             168 aa            linear   VRT 06-MAY-2021
DEFINITION  gremlin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325843
VERSION     XP_041325843.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469909.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="gremlin-2"
                     /calculated_mol_wt=19058
     Region          51..158
                     /region_name="DAN"
                     /note="DAN domain; pfam03045"
                     /db_xref="CDD:460786"
     CDS             1..168
                     /gene="GREM2"
                     /coded_by="XM_041469909.1:239..745"
                     /db_xref="GeneID:121354880"
ORIGIN      
        1 mvwkfalsvv lmaalvrvmd trknrpagai pspykgsssn hserrqqlnk evlassqeal
       61 vvterkylks dwcktqplrq tvseegcisr tiinrfcygq cnsfyiprhv kkeeesfqsc
      121 afckphkvts stvqlecpel dppfrlkkiq kvkqcrcmsv nlnssgkl
//
LOCUS       XP_041325844             487 aa            linear   VRT 06-MAY-2021
DEFINITION  2-aminomuconic semialdehyde dehydrogenase [Pyrgilauda ruficollis].
ACCESSION   XP_041325844
VERSION     XP_041325844.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469910.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..487
                     /product="2-aminomuconic semialdehyde dehydrogenase"
                     /calculated_mol_wt=53005
     Region          27..485
                     /region_name="ALDH_F8_HMSADH"
                     /note="Human aldehyde dehydrogenase family 8 member
                     A1-like; cd07093"
                     /db_xref="CDD:143412"
     Site            order(152..154,160,178,180..181,211,215..216,230..232,235,
                     238,253..254,287,391,393,457)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:143412"
     Site            order(155,253,284,287)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:143412"
     CDS             1..487
                     /gene="ALDH8A1"
                     /coded_by="XM_041469910.1:7..1470"
                     /db_xref="GeneID:121354881"
ORIGIN      
        1 mahskallvl enfiggkfvp cssyidsynp stgdvycrvp dsgkeevesa vkaakdafpi
       61 wssksplers qilnkladli ehdleafaqa eskdqgktit fartvdipra vhnfrffass
      121 ilhhvtecte mptmgcvhyt srapvgvagl ispwnlplyl ltwkiapaia cgntvvakps
      181 emtsvtawmm ckllekagvp pgvvnvvfgt gakagealvc hpdvplisft gstltaqrit
      241 eksaphckrl slelggknpa iifddadlsq cipttvrssf anqgeiclct srifvqrgiy
      301 seflkrfvae akkwktgnps dptidvgali skehlekvrt yvkkaqaega rvlcgegvdp
      361 lalppgnqkg yfmlptviae vkdesccmqe eifgpvtcvv afdteeevir rangvkygla
      421 atvwssnvgr vhrvarrlqs glvwtncwlv rdlnlpfggm kasgigrega kdsyefftev
      481 ktitikh
//
LOCUS       XP_041325845             132 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S12 [Pyrgilauda ruficollis].
ACCESSION   XP_041325845
VERSION     XP_041325845.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469911.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="40S ribosomal protein S12"
                     /calculated_mol_wt=14384
     Region          16..111
                     /region_name="Ribosomal_L7Ae"
                     /note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
                     pfam01248"
                     /db_xref="CDD:426153"
     CDS             1..132
                     /gene="RPS12"
                     /coded_by="XM_041469911.1:111..509"
                     /db_xref="GeneID:121354882"
ORIGIN      
        1 maeegitagg vmdvntalqe vlktalihdg largireaak aldkrqahlc vlasncdept
       61 yvklvealca ehqinlikvd dnkklgewvg lckidregkp rkvvgcscvv vkdygkesqa
      121 kdvieeyfkc kk
//
LOCUS       XP_041325846             205 aa            linear   VRT 06-MAY-2021
DEFINITION  putative gap junction epsilon-1 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041325846
VERSION     XP_041325846.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469912.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..205
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..205
                     /product="putative gap junction epsilon-1 protein"
                     /calculated_mol_wt=23545
     Region          18..192
                     /region_name="Connexin"
                     /note="pfam00029"
                     /db_xref="CDD:459638"
     CDS             1..205
                     /gene="GJE1"
                     /coded_by="XM_041469912.1:35..652"
                     /db_xref="GeneID:121354883"
ORIGIN      
        1 mspnyirsfs egclrpptvi gqfhtlffgs irmfflgvlg favygnealh fscdpdkrev
       61 nlfcynqfrp itpqvfwalq lvivlvpgaf fhlyaacksi kqedilqkss ytgfyifsvf
      121 lrivlevvaf wlqiqlfgfk vnaiymcdvg aldkkfnitr cmvpehfekt ifliamytft
      181 vitvilcvae ifetscrrlg flkpq
//
LOCUS       XP_041325847             179 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor 21 [Pyrgilauda ruficollis].
ACCESSION   XP_041325847
VERSION     XP_041325847.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469913.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="transcription factor 21"
                     /calculated_mol_wt=19499
     Region          77..140
                     /region_name="bHLH_TS_TCF21_capsulin"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     transcription factor 21 (TCF-21) and similar proteins;
                     cd19704"
                     /db_xref="CDD:381547"
     Site            order(81,85,87..89,91,96,114..117)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381547"
     Site            order(94..95,98..99,101..102,118,121,125,127..128,132,
                     134..135)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381547"
     CDS             1..179
                     /gene="TCF21"
                     /coded_by="XM_041469913.1:448..987"
                     /db_xref="GeneID:121354884"
ORIGIN      
        1 mstgslsdve dlqevemlec dglkmdtnke fgastesnee gsngengspq kgrgasgkrk
       61 kappkkspln gvsqegkqvq rnaanarera rmrvlskafs rlkttlpwvp pdtklskldt
      121 lrlassyiah lrqilandky engyihpvnl twpfmvagkp esdlkevvnt nrlcgptas
//
LOCUS       XP_041325848              81 aa            linear   VRT 06-MAY-2021
DEFINITION  costars family protein ABRACL isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325848
VERSION     XP_041325848.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469914.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..81
                     /product="costars family protein ABRACL isoform X1"
                     /calculated_mol_wt=8922
     Region          2..79
                     /region_name="Costars"
                     /note="pfam14705"
                     /db_xref="CDD:464274"
     CDS             1..81
                     /gene="ABRACL"
                     /coded_by="XM_041469914.1:65..310"
                     /db_xref="GeneID:121354885"
ORIGIN      
        1 mnveheisll veeirrlgtk nadgqvsvkf gvlfadekca nlfealvgtl kaakrrkivt
       61 yqgelllqgv hdnvdimllq d
//
LOCUS       XP_041325849              81 aa            linear   VRT 06-MAY-2021
DEFINITION  costars family protein ABRACL isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325849
VERSION     XP_041325849.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469915.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..81
                     /product="costars family protein ABRACL isoform X1"
                     /calculated_mol_wt=8922
     Region          2..79
                     /region_name="Costars"
                     /note="pfam14705"
                     /db_xref="CDD:464274"
     CDS             1..81
                     /gene="ABRACL"
                     /coded_by="XM_041469915.1:31..276"
                     /db_xref="GeneID:121354885"
ORIGIN      
        1 mnveheisll veeirrlgtk nadgqvsvkf gvlfadekca nlfealvgtl kaakrrkivt
       61 yqgelllqgv hdnvdimllq d
//
LOCUS       XP_041325850              81 aa            linear   VRT 06-MAY-2021
DEFINITION  costars family protein ABRACL isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325850
VERSION     XP_041325850.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469916.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..81
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..81
                     /product="costars family protein ABRACL isoform X2"
                     /calculated_mol_wt=8873
     Region          2..69
                     /region_name="Costars"
                     /note="pfam14705"
                     /db_xref="CDD:464274"
     CDS             1..81
                     /gene="ABRACL"
                     /coded_by="XM_041469916.1:65..310"
                     /db_xref="GeneID:121354885"
ORIGIN      
        1 mnveheisll veeirrlgtk nadgqvsvkf gvlfadekca nlfealvgtl kaakrrkivt
       61 yqgelllqgn slkclvvifn i
//
LOCUS       XP_041325851             764 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325851
VERSION     XP_041325851.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469917.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..764
                     /product="transcriptional activator Myb isoform X1"
                     /calculated_mol_wt=85198
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          269..314
                     /region_name="LMSTEN"
                     /note="LMSTEN motif; pfam07988"
                     /db_xref="CDD:462332"
     Region          521..680
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..764
                     /gene="MYB"
                     /coded_by="XM_041469917.1:1..2295"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqrhyndedp ekekrikele
      301 lllmstenel kgqqalptqn htsnypgwhs ttiadstrts gdsapvsclg ehhhctpspp
      361 vdhgclpees asparcmivh qsnildnvkn llefaetlql idsdpsswgd lssfeffedt
      421 dtpasrappg kvaqlqqrga sacrpqgqpt tnlskvmssq gslgspktls asqgsaaprv
      481 lprkrrghcg pvasghgstl vladvssstp pkrspvkslp fspsqflnts snhenlnldn
      541 paltstpvcg hkmaltspfh rdqafkaqke nhvfrtpaik rsilessprt ptpfknalaa
      601 qeikygplkm lpqtpthlve dlqdvikqes eesaivaglh esgppllkki kqevesptdk
      661 agnffcsnhw egenlntqlf tpgstmedvp nlltssilkm pvsedddsfq ktvavprnrp
      721 lasplqhlnn twesascgki edqmalpdqa rkymatfptr tlvm
//
LOCUS       XP_041325852             761 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325852
VERSION     XP_041325852.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469918.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..761
                     /product="transcriptional activator Myb isoform X2"
                     /calculated_mol_wt=84917
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          269..314
                     /region_name="LMSTEN"
                     /note="LMSTEN motif; pfam07988"
                     /db_xref="CDD:462332"
     Region          518..677
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..761
                     /gene="MYB"
                     /coded_by="XM_041469918.1:1..2286"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqrhyndedp ekekrikele
      301 lllmstenel kgqqtqnhts nypgwhstti adstrtsgds apvsclgehh hctpsppvdh
      361 gclpeesasp arcmivhqsn ildnvknlle faetlqlids dpsswgdlss feffedtdtp
      421 asrappgkva qlqqrgasac rpqgqpttnl skvmssqgsl gspktlsasq gsaaprvlpr
      481 krrghcgpva sghgstlvla dvssstppkr spvkslpfsp sqflntssnh enlnldnpal
      541 tstpvcghkm altspfhrdq afkaqkenhv frtpaikrsi lessprtptp fknalaaqei
      601 kygplkmlpq tpthlvedlq dvikqesees aivaglhesg ppllkkikqe vesptdkagn
      661 ffcsnhwege nlntqlftpg stmedvpnll tssilkmpvs edddsfqktv avprnrplas
      721 plqhlnntwe sascgkiedq malpdqarky matfptrtlv m
//
LOCUS       XP_041325854             748 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325854
VERSION     XP_041325854.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469920.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..748
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..748
                     /product="transcriptional activator Myb isoform X3"
                     /calculated_mol_wt=83383
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          269..314
                     /region_name="LMSTEN"
                     /note="LMSTEN motif; pfam07988"
                     /db_xref="CDD:462332"
     Region          505..664
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..748
                     /gene="MYB"
                     /coded_by="XM_041469920.1:1..2247"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqrhyndedp ekekrikele
      301 lllmstenel kgqqalptqn htsnypgwhs ttiadstrts gdsapvsclg ehhhctpspp
      361 vdhgclpees asparcmivh qsnildndps swgdlssfef fedtdtpasr appgkvaqlq
      421 qrgasacrpq gqpttnlskv mssqgslgsp ktlsasqgsa aprvlprkrr ghcgpvasgh
      481 gstlvladvs sstppkrspv kslpfspsqf lntssnhenl nldnpaltst pvcghkmalt
      541 spfhrdqafk aqkenhvfrt paikrsiles sprtptpfkn alaaqeikyg plkmlpqtpt
      601 hlvedlqdvi kqeseesaiv aglhesgppl lkkikqeves ptdkagnffc snhwegenln
      661 tqlftpgstm edvpnlltss ilkmpvsedd dsfqktvavp rnrplasplq hlnntwesas
      721 cgkiedqmal pdqarkymat fptrtlvm
//
LOCUS       XP_041325855             642 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325855
VERSION     XP_041325855.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469921.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="transcriptional activator Myb isoform X4"
                     /calculated_mol_wt=72602
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          269..314
                     /region_name="LMSTEN"
                     /note="LMSTEN motif; pfam07988"
                     /db_xref="CDD:462332"
     Region          399..558
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..642
                     /gene="MYB"
                     /coded_by="XM_041469921.1:140..2068"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqrhyndedp ekekrikele
      301 lllmstenel kgqqalptqn htsnypgwhs ttiadstrts gdsapvsclg ehhhctpspp
      361 vdhgclpees asparcmivh qsnildnvkn llefaetlql idsflntssn henlnldnpa
      421 ltstpvcghk maltspfhrd qafkaqkenh vfrtpaikrs ilessprtpt pfknalaaqe
      481 ikygplkmlp qtpthlvedl qdvikqesee saivaglhes gppllkkikq evesptdkag
      541 nffcsnhweg enlntqlftp gstmedvpnl ltssilkmpv sedddsfqkt vavprnrpla
      601 splqhlnntw esascgkied qmalpdqark ymatfptrtl vm
//
LOCUS       XP_041325856             639 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325856
VERSION     XP_041325856.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469922.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..639
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..639
                     /product="transcriptional activator Myb isoform X5"
                     /calculated_mol_wt=72321
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          269..314
                     /region_name="LMSTEN"
                     /note="LMSTEN motif; pfam07988"
                     /db_xref="CDD:462332"
     Region          396..555
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..639
                     /gene="MYB"
                     /coded_by="XM_041469922.1:1..1920"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqrhyndedp ekekrikele
      301 lllmstenel kgqqtqnhts nypgwhstti adstrtsgds apvsclgehh hctpsppvdh
      361 gclpeesasp arcmivhqsn ildnvknlle faetlqlids flntssnhen lnldnpalts
      421 tpvcghkmal tspfhrdqaf kaqkenhvfr tpaikrsile ssprtptpfk nalaaqeiky
      481 gplkmlpqtp thlvedlqdv ikqeseesai vaglhesgpp llkkikqeve sptdkagnff
      541 csnhwegenl ntqlftpgst medvpnllts silkmpvsed ddsfqktvav prnrplaspl
      601 qhlnntwesa scgkiedqma lpdqarkyma tfptrtlvm
//
LOCUS       XP_041325857             607 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325857
VERSION     XP_041325857.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469923.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="transcriptional activator Myb isoform X6"
                     /calculated_mol_wt=68424
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          364..523
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..607
                     /gene="MYB"
                     /coded_by="XM_041469923.1:1..1824"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqtqnhtsny pgwhsttiad
      301 strtsgdsap vsclgehhhc tpsppvdhgc lpeesaspar cmivhqsnil dnvknllefa
      361 etlqlidsfl ntssnhenln ldnpaltstp vcghkmalts pfhrdqafka qkenhvfrtp
      421 aikrsiless prtptpfkna laaqeikygp lkmlpqtpth lvedlqdvik qeseesaiva
      481 glhesgppll kkikqevesp tdkagnffcs nhwegenlnt qlftpgstme dvpnlltssi
      541 lkmpvseddd sfqktvavpr nrplasplqh lnntwesasc gkiedqmalp dqarkymatf
      601 ptrtlvm
//
LOCUS       XP_041325858             605 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325858
VERSION     XP_041325858.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469924.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..605
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..605
                     /product="transcriptional activator Myb isoform X7"
                     /calculated_mol_wt=68520
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          269..314
                     /region_name="LMSTEN"
                     /note="LMSTEN motif; pfam07988"
                     /db_xref="CDD:462332"
     Region          399..531
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..605
                     /gene="MYB"
                     /coded_by="XM_041469924.1:1..1818"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqrhyndedp ekekrikele
      301 lllmstenel kgqqalptqn htsnypgwhs ttiadstrts gdsapvsclg ehhhctpspp
      361 vdhgclpees asparcmivh qsnildnvkn llefaetlql idsflntssn henlnldnpa
      421 ltstpvcghk maltspfhrd qafkaqkenh vfrtpaikrs ilessprtpt pfknalaaqe
      481 ikygplkmlp qtpthlvedl qdvikqesee saivaglhes gppllkkikq enlltssilk
      541 mpvsedddsf qktvavprnr plasplqhln ntwesascgk iedqmalpdq arkymatfpt
      601 rtlvm
//
LOCUS       XP_041325859             556 aa            linear   VRT 06-MAY-2021
DEFINITION  transcriptional activator Myb isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325859
VERSION     XP_041325859.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469925.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="transcriptional activator Myb isoform X8"
                     /calculated_mol_wt=63314
     Region          43..103
                     /region_name="Myb_DNA-bind_6"
                     /note="Myb-like DNA-binding domain; pfam13921"
                     /db_xref="CDD:372817"
     Site            order(43,73..74,76..77,79..81,83..85)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238096"
     Region          89..>191
                     /region_name="REB1"
                     /note="Myb superfamily proteins, including transcription
                     factors and mRNA splicing factors [Transcription / RNA
                     processing and modification / Cell division and chromosome
                     partitioning]; COG5147"
                     /db_xref="CDD:227476"
     Region          269..314
                     /region_name="LMSTEN"
                     /note="LMSTEN motif; pfam07988"
                     /db_xref="CDD:462332"
     Region          318..472
                     /region_name="Cmyb_C"
                     /note="C-myb, C-terminal; pfam09316"
                     /db_xref="CDD:462753"
     CDS             1..556
                     /gene="MYB"
                     /coded_by="XM_041469925.1:1..1671"
                     /db_xref="GeneID:121354887"
ORIGIN      
        1 msrrprhsiy ssdddeedve vydhdydgll pktgkrhlgk trwtreedek lkklveqngt
       61 edwkvianfl pnrtdvqcqh rwqkvlnpel ikgpwtkeed qrvielvqky gpkrwsviak
      121 hlkgrigkqc rerwhnhlnp evkktswtee edriiyqahk rlgnrwaeia kllpgrtdna
      181 iknhwnstmr rkveqegylq dsskachssa aagfqknnhl mafahnpspp aqlpvasqpp
      241 lgsdypyyhi pepqnvpgqi pypvalhvni vnvpqpaaaa iqrhyndedp ekekrikele
      301 lllmstenel kgqqalpfln tssnhenlnl dnpaltstpv cghkmaltsp fhrdqafkaq
      361 kenhvfrtpa ikrsilessp rtptpfknal aaqeikygpl kmlpqtpthl vedlqdvikq
      421 eseesaivag lhesgppllk kikqevespt dkagnffcsn hwegenlntq lftpgstmed
      481 vpnlltssil kmpvseddds fqktvavprn rplasplqhl nntwesascg kiedqmalpd
      541 qarkymatfp trtlvm
//
LOCUS       XP_041325860            1484 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325860
VERSION     XP_041325860.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469926.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1484
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1484
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X1"
                     /calculated_mol_wt=166715
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          916..1188
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1274..1479
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1484
                     /gene="PTPRK"
                     /coded_by="XM_041469926.1:217..4671"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaaate epevipdpak qtdrvvkiag isagilvfil lllvvilivk
      781 kryitwrrnv cirnirrsyy sysyylklak krkdamgttr qemthmvnam drsyadqstl
      841 haedplsitf mdshnfsprl pndplvptav lvpitdenhs ataessrlld vprylcegte
      901 spyqtgqlhp airvadllqh inlmktsdsy gfkeeyesff egqsaswdva kkdqnrtknr
      961 ygniiaydhs rvilqpvedd pssdyinany idgyqrpshy iatqgpvhet vydfwrmiwq
     1021 eqsacvvmvt nlvevgrvkc ykywpddtev ygdfkvtcve meplaeyvvr tftlgrrgyn
     1081 eirevkqfhf tgwpdhgvpy natgllsfir rvklsnppsa gpivvhcsag agrtgcyivi
     1141 dimldmaere gvvdiyncvk alrsrrinmv qteeqyifih daileaclcg etaipvcefk
     1201 aayfdmirid sqtnsshlkd efqtlnsvtp rlqaedcsia clprnhdknr fmdmlppdrc
     1261 lpflitidge ssnyinaalm dsyrqpaafi vtqhplpntv kdfwrlvydy gctslvmlne
     1321 vdlaqgcpqy wpeegilryg piqvecmscs mdcdvinrif ricnltrpqe gylmvqqfqy
     1381 lgwashrdvp askrsflkli lqvekwqeec eegegrtiih clngggrsgm fcaigivvem
     1441 vkrqnvvdvf havktlrnsk pnmvetpeqy rfcydvaley less
//
LOCUS       XP_041325861            1470 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325861
VERSION     XP_041325861.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469927.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1470
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X2"
                     /calculated_mol_wt=164870
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          902..1174
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1260..1465
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1470
                     /gene="PTPRK"
                     /coded_by="XM_041469927.1:217..4629"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaaate epevipdpak qtdrvvkiag isagilvfil lllvvilivk
      781 krrsyysysy ylklakkrkd amgttrqemt hmvnamdrsy adqstlhaed plsitfmdsh
      841 nfsprlpndp lvptavlvpi tdenhsatae ssrlldvpry lcegtespyq tgqlhpairv
      901 adllqhinlm ktsdsygfke eyesffegqs aswdvakkdq nrtknrygni iaydhsrvil
      961 qpveddpssd yinanyidgy qrpshyiatq gpvhetvydf wrmiwqeqsa cvvmvtnlve
     1021 vgrvkcykyw pddtevygdf kvtcvemepl aeyvvrtftl grrgyneire vkqfhftgwp
     1081 dhgvpynatg llsfirrvkl snppsagpiv vhcsagagrt gcyividiml dmaeregvvd
     1141 iyncvkalrs rrinmvqtee qyifihdail eaclcgetai pvcefkaayf dmiridsqtn
     1201 sshlkdefqt lnsvtprlqa edcsiaclpr nhdknrfmdm lppdrclpfl itidgessny
     1261 inaalmdsyr qpaafivtqh plpntvkdfw rlvydygcts lvmlnevdla qgcpqywpee
     1321 gilrygpiqv ecmscsmdcd vinrifricn ltrpqegylm vqqfqylgwa shrdvpaskr
     1381 sflklilqve kwqeeceege grtiihclng ggrsgmfcai givvemvkrq nvvdvfhavk
     1441 tlrnskpnmv etpeqyrfcy dvaleyless
//
LOCUS       XP_041325862            1469 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325862
VERSION     XP_041325862.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469928.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1469
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X3"
                     /calculated_mol_wt=164799
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          901..1173
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1259..1464
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1469
                     /gene="PTPRK"
                     /coded_by="XM_041469928.1:217..4626"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaatee pevipdpakq tdrvvkiagi sagilvfill llvvilivkk
      781 rrsyysysyy lklakkrkda mgttrqemth mvnamdrsya dqstlhaedp lsitfmdshn
      841 fsprlpndpl vptavlvpit denhsataes srlldvpryl cegtespyqt gqlhpairva
      901 dllqhinlmk tsdsygfkee yesffegqsa swdvakkdqn rtknrygnii aydhsrvilq
      961 pveddpssdy inanyidgyq rpshyiatqg pvhetvydfw rmiwqeqsac vvmvtnlvev
     1021 grvkcykywp ddtevygdfk vtcvemepla eyvvrtftlg rrgyneirev kqfhftgwpd
     1081 hgvpynatgl lsfirrvkls nppsagpivv hcsagagrtg cyividimld maeregvvdi
     1141 yncvkalrsr rinmvqteeq yifihdaile aclcgetaip vcefkaayfd miridsqtns
     1201 shlkdefqtl nsvtprlqae dcsiaclprn hdknrfmdml ppdrclpfli tidgessnyi
     1261 naalmdsyrq paafivtqhp lpntvkdfwr lvydygctsl vmlnevdlaq gcpqywpeeg
     1321 ilrygpiqve cmscsmdcdv inrifricnl trpqegylmv qqfqylgwas hrdvpaskrs
     1381 flklilqvek wqeeceegeg rtiihclngg grsgmfcaig ivvemvkrqn vvdvfhavkt
     1441 lrnskpnmve tpeqyrfcyd valeyless
//
LOCUS       XP_041325864            1460 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325864
VERSION     XP_041325864.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469930.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1460
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X4"
                     /calculated_mol_wt=163455
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          892..1164
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1250..1455
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1460
                     /gene="PTPRK"
                     /coded_by="XM_041469930.1:217..4599"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaaate epevipdpak qtdrvvkiag isagilvfil lllvvilivk
      781 ksklakkrkd amgttrqemt hmvnamdrsy adqstlhaed plsitfmdsh nfsprlpndp
      841 lvptavlvpi tdenhsatae ssrlldvpry lcegtespyq tgqlhpairv adllqhinlm
      901 ktsdsygfke eyesffegqs aswdvakkdq nrtknrygni iaydhsrvil qpveddpssd
      961 yinanyidgy qrpshyiatq gpvhetvydf wrmiwqeqsa cvvmvtnlve vgrvkcykyw
     1021 pddtevygdf kvtcvemepl aeyvvrtftl grrgyneire vkqfhftgwp dhgvpynatg
     1081 llsfirrvkl snppsagpiv vhcsagagrt gcyividiml dmaeregvvd iyncvkalrs
     1141 rrinmvqtee qyifihdail eaclcgetai pvcefkaayf dmiridsqtn sshlkdefqt
     1201 lnsvtprlqa edcsiaclpr nhdknrfmdm lppdrclpfl itidgessny inaalmdsyr
     1261 qpaafivtqh plpntvkdfw rlvydygcts lvmlnevdla qgcpqywpee gilrygpiqv
     1321 ecmscsmdcd vinrifricn ltrpqegylm vqqfqylgwa shrdvpaskr sflklilqve
     1381 kwqeeceege grtiihclng ggrsgmfcai givvemvkrq nvvdvfhavk tlrnskpnmv
     1441 etpeqyrfcy dvaleyless
//
LOCUS       XP_041325865            1456 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325865
VERSION     XP_041325865.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469931.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1456
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1456
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X5"
                     /calculated_mol_wt=163044
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          888..1160
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1246..1451
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1456
                     /gene="PTPRK"
                     /coded_by="XM_041469931.1:217..4587"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaaate epevipdpak qtdrvvkiag isagilvfil lllvvilivk
      781 ksklakkrkd amgttrqemt hmvnamdrsy adqstlhaed plsitfmdsh nfsprlpndp
      841 lvptavlden hsataessrl ldvprylceg tespyqtgql hpairvadll qhinlmktsd
      901 sygfkeeyes ffegqsaswd vakkdqnrtk nrygniiayd hsrvilqpve ddpssdyina
      961 nyidgyqrps hyiatqgpvh etvydfwrmi wqeqsacvvm vtnlvevgrv kcykywpddt
     1021 evygdfkvtc vemeplaeyv vrtftlgrrg yneirevkqf hftgwpdhgv pynatgllsf
     1081 irrvklsnpp sagpivvhcs agagrtgcyi vidimldmae regvvdiync vkalrsrrin
     1141 mvqteeqyif ihdaileacl cgetaipvce fkaayfdmir idsqtnsshl kdefqtlnsv
     1201 tprlqaedcs iaclprnhdk nrfmdmlppd rclpflitid gessnyinaa lmdsyrqpaa
     1261 fivtqhplpn tvkdfwrlvy dygctslvml nevdlaqgcp qywpeegilr ygpiqvecms
     1321 csmdcdvinr ifricnltrp qegylmvqqf qylgwashrd vpaskrsflk lilqvekwqe
     1381 eceegegrti ihclngggrs gmfcaigivv emvkrqnvvd vfhavktlrn skpnmvetpe
     1441 qyrfcydval eyless
//
LOCUS       XP_041325866            1455 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325866
VERSION     XP_041325866.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469932.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1455
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X6"
                     /calculated_mol_wt=162973
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          887..1159
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1245..1450
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1455
                     /gene="PTPRK"
                     /coded_by="XM_041469932.1:217..4584"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaatee pevipdpakq tdrvvkiagi sagilvfill llvvilivkk
      781 sklakkrkda mgttrqemth mvnamdrsya dqstlhaedp lsitfmdshn fsprlpndpl
      841 vptavldenh sataessrll dvprylcegt espyqtgqlh pairvadllq hinlmktsds
      901 ygfkeeyesf fegqsaswdv akkdqnrtkn rygniiaydh srvilqpved dpssdyinan
      961 yidgyqrpsh yiatqgpvhe tvydfwrmiw qeqsacvvmv tnlvevgrvk cykywpddte
     1021 vygdfkvtcv emeplaeyvv rtftlgrrgy neirevkqfh ftgwpdhgvp ynatgllsfi
     1081 rrvklsnpps agpivvhcsa gagrtgcyiv idimldmaer egvvdiyncv kalrsrrinm
     1141 vqteeqyifi hdaileaclc getaipvcef kaayfdmiri dsqtnsshlk defqtlnsvt
     1201 prlqaedcsi aclprnhdkn rfmdmlppdr clpflitidg essnyinaal mdsyrqpaaf
     1261 ivtqhplpnt vkdfwrlvyd ygctslvmln evdlaqgcpq ywpeegilry gpiqvecmsc
     1321 smdcdvinri fricnltrpq egylmvqqfq ylgwashrdv paskrsflkl ilqvekwqee
     1381 ceegegrtii hclngggrsg mfcaigivve mvkrqnvvdv fhavktlrns kpnmvetpeq
     1441 yrfcydvale yless
//
LOCUS       XP_041325867            1444 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325867
VERSION     XP_041325867.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469933.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1444
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1444
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X7"
                     /calculated_mol_wt=161862
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          876..1148
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1234..1439
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1444
                     /gene="PTPRK"
                     /coded_by="XM_041469933.1:217..4551"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaaate epevipdpak qtdrvvkiag isagilvfil lllvvilivk
      781 ksklakkrkd amgttrqemt hmvnamdrsy adqstlhaed plsitfmdsh nfspryenhs
      841 ataessrlld vprylcegte spyqtgqlhp airvadllqh inlmktsdsy gfkeeyesff
      901 egqsaswdva kkdqnrtknr ygniiaydhs rvilqpvedd pssdyinany idgyqrpshy
      961 iatqgpvhet vydfwrmiwq eqsacvvmvt nlvevgrvkc ykywpddtev ygdfkvtcve
     1021 meplaeyvvr tftlgrrgyn eirevkqfhf tgwpdhgvpy natgllsfir rvklsnppsa
     1081 gpivvhcsag agrtgcyivi dimldmaere gvvdiyncvk alrsrrinmv qteeqyifih
     1141 daileaclcg etaipvcefk aayfdmirid sqtnsshlkd efqtlnsvtp rlqaedcsia
     1201 clprnhdknr fmdmlppdrc lpflitidge ssnyinaalm dsyrqpaafi vtqhplpntv
     1261 kdfwrlvydy gctslvmlne vdlaqgcpqy wpeegilryg piqvecmscs mdcdvinrif
     1321 ricnltrpqe gylmvqqfqy lgwashrdvp askrsflkli lqvekwqeec eegegrtiih
     1381 clngggrsgm fcaigivvem vkrqnvvdvf havktlrnsk pnmvetpeqy rfcydvaley
     1441 less
//
LOCUS       XP_041325868            1443 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-type tyrosine-protein phosphatase kappa isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325868
VERSION     XP_041325868.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469934.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1443
                     /product="receptor-type tyrosine-protein phosphatase kappa
                     isoform X8"
                     /calculated_mol_wt=161791
     Region          36..196
                     /region_name="MAM"
                     /note="Domain in meprin, A5, receptor protein tyrosine
                     phosphatase mu (and others); smart00137"
                     /db_xref="CDD:214533"
     Region          206..292
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          216..220
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          230..236
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          257..261
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          271..276
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Site            order(296,359,376)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          298..375
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(377..378,380..381)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          <463..>675
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          496..593
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(496,567,582)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(583..584,585..586)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          875..1147
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1233..1438
                     /region_name="R-PTPc-K-2"
                     /note="PTP domain of receptor-type tyrosine-protein
                     phosphatase K, repeat 2; cd14636"
                     /db_xref="CDD:350484"
     CDS             1..1443
                     /gene="PTPRK"
                     /coded_by="XM_041469934.1:217..4548"
                     /db_xref="GeneID:121354888"
ORIGIN      
        1 mgrgagaaas lpllaalall agrspallga araqlsaggc tfddgpgpcd yhqdlyddfd
       61 wvhvsaqeph ylppempqgs ymivissdhd pgektrlqlp tmkendthci dfsyllyskn
      121 ggnpgtlnil vrvnkgplan piwnvtgstg kdwlraelav stfwpneyqv ifeaevsdgr
      181 ngyiaiddiq vlsypcdksp hflrlgdvev nagqnatfqc iatgrdavnn klwlqrrnge
      241 dipvaqtkni nhrrfaatfk lqevtktdqd lyrcvtqser gsgvsnfaql ivrepprpia
      301 ppqllgvgpt ylliqlnans iigdgpiilk eveyrmtsgt wtethavnap tyklwhldpd
      361 teyeirvllt rpgeggtgqp gpplitrtkc aepmrtpktl kiaeiqarhi avdweslgyn
      421 itrchtfnvt icyhyfcghn eskadcldmd pkapqhvvdh lppytnvslk miltnpegrk
      481 eseetiiqtd edvpgpippk svkgtpfedk iflnwkepvd pngiitqyev syssiqsfdp
      541 avpvagppqt vsklwnsthh vfshlhpgtt yqffirasti kgfgpattin vttnisaptl
      601 pdyegvdasl netattitvl lrpaqakgap isayqivvee lhphrtkret gamecyqipv
      661 tyqtalsggs pyyfaaqlpp gnlpepapft vgdnrtyqgf wnpplaprkg yniyfqamss
      721 veketktqcv riatkaatee pevipdpakq tdrvvkiagi sagilvfill llvvilivkk
      781 sklakkrkda mgttrqemth mvnamdrsya dqstlhaedp lsitfmdshn fspryenhsa
      841 taessrlldv prylcegtes pyqtgqlhpa irvadllqhi nlmktsdsyg fkeeyesffe
      901 gqsaswdvak kdqnrtknry gniiaydhsr vilqpveddp ssdyinanyi dgyqrpshyi
      961 atqgpvhetv ydfwrmiwqe qsacvvmvtn lvevgrvkcy kywpddtevy gdfkvtcvem
     1021 eplaeyvvrt ftlgrrgyne irevkqfhft gwpdhgvpyn atgllsfirr vklsnppsag
     1081 pivvhcsaga grtgcyivid imldmaereg vvdiyncvka lrsrrinmvq teeqyifihd
     1141 aileaclcge taipvcefka ayfdmirids qtnsshlkde fqtlnsvtpr lqaedcsiac
     1201 lprnhdknrf mdmlppdrcl pflitidges snyinaalmd syrqpaafiv tqhplpntvk
     1261 dfwrlvydyg ctslvmlnev dlaqgcpqyw peegilrygp iqvecmscsm dcdvinrifr
     1321 icnltrpqeg ylmvqqfqyl gwashrdvpa skrsflklil qvekwqeece egegrtiihc
     1381 lngggrsgmf caigivvemv krqnvvdvfh avktlrnskp nmvetpeqyr fcydvaleyl
     1441 ess
//
LOCUS       XP_041325869             554 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 22 member 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325869
VERSION     XP_041325869.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469935.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..554
                     /product="solute carrier family 22 member 2"
                     /calculated_mol_wt=62079
     Region          114..514
                     /region_name="MFS_SLC22A1_2_3"
                     /note="Solute carrier family 22 members 1, 2, and 3 (also
                     called Organic cation transporters 1, 2, and 3) of the
                     Major Facilitator Superfamily of transporters; cd17379"
                     /db_xref="CDD:340937"
     Site            order(131..132,135..136,139,163,213..214,216..218,221,237,
                     240..241,244,354,357..358,361..363,366,386,390,441..442,
                     446,450,466,469..470,473..474,477)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340937"
     CDS             1..554
                     /gene="SLC22A2"
                     /coded_by="XM_041469935.1:644..2308"
                     /db_xref="GeneID:121354889"
ORIGIN      
        1 mptlddileh vgefdrfqkq tffvlcllsa sftpvyvgvv ffgftpehrc sspgvaelsq
       61 rcgwsleeql nhtvpewdgh gasfssrcrr yevdwnttgi sctdplgslg gsgstvplgp
      121 crdgwvydsp gssivtefdl vcedswkldl fqssvnagff igslnigyia drfgrkfcll
      181 ttivanvvcg illvfvpsyl wiviirflqg lvskgcwtag yilvtevvgp qyrrmvgily
      241 qaafsvgllv fdgiayalph wrwlqltvtl ptcflllyyw clpesprwli sqgkndkamk
      301 ivsnmakknq kkmpshfkdi kfeeedcgkq kpslmdlfrt pqirkntlil mynwftssil
      361 yqglimhmgm aaenmyldfl ysalvefpaa fiiivtidrv grrypwamsn lvagaaclat
      421 allpedmhwl kvitacigrm gitmafemvc fvntelypty irnlgvmvcs slcdiggvia
      481 pfvvyrlvei whdlplivft vlglisgglv lllpetkgrv lpetvedven fhrqsaptak
      541 kiylrvqgse vahs
//
LOCUS       XP_041325870             511 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger and BTB domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325870
VERSION     XP_041325870.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469936.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="zinc finger and BTB domain-containing protein 2"
                     /calculated_mol_wt=56740
     Region          3..117
                     /region_name="BTB_POZ_ZBTB2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 2 (ZBTB2); cd18193"
                     /db_xref="CDD:349502"
     Region          254..276
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          256..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          361..383
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          363..383
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(368,370,372,374..375,378..379,382,395,397,401..402,
                     405..406,440,453,455,457,459..460,463..464)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          375..397
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          390..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          448..464
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..511
                     /gene="ZBTB2"
                     /coded_by="XM_041469936.1:28..1563"
                     /db_xref="GeneID:121354890"
ORIGIN      
        1 mdlanhglil lqqlnaqref gflcdctvai gdvyfkahks vlasfsnyfk mlfvhqtsec
       61 vrlkatdiqp difsyllhlm ytgkmapqli dpvrleqgik flhaypliqe aslasqgtfs
      121 hpdqvfplas slygiqiadh qirhptkvts atdklgrepr pqtsrmnqeq asegsqlsql
      181 ganlpqvtrt nmsasdplps slspelvsaa gnnspsgeea nmeasssdeq pasltiahvk
      241 psimkrngsf pkyyachlcg rrfnlrsslr ehlqihtgvp ftssqqgesn islslcnnta
      301 dkdamevpea gmisdselqq isdspiidgq qqsetpppsd iadidnleqa dqerevkrrk
      361 yecsicgrkf iqkshwrehm yihtgkpfkc stcdksfcra nqaarhvcln qsmdtytmvd
      421 kqtlelctfe egsqmdnmlv qtnkpykcnl cdktfstpne vvkhscqnqn svftleedrs
      481 illgggdtea tetdnavlas ikkeqeavll d
//
LOCUS       XP_041325871             511 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger and BTB domain-containing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325871
VERSION     XP_041325871.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469937.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..511
                     /product="zinc finger and BTB domain-containing protein 2"
                     /calculated_mol_wt=56740
     Region          3..117
                     /region_name="BTB_POZ_ZBTB2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in zinc finger and
                     BTB domain-containing protein 2 (ZBTB2); cd18193"
                     /db_xref="CDD:349502"
     Region          254..276
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          256..276
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          361..383
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          363..383
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(368,370,372,374..375,378..379,382,395,397,401..402,
                     405..406,440,453,455,457,459..460,463..464)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          375..397
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          390..441
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          448..464
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..511
                     /gene="ZBTB2"
                     /coded_by="XM_041469937.1:428..1963"
                     /db_xref="GeneID:121354890"
ORIGIN      
        1 mdlanhglil lqqlnaqref gflcdctvai gdvyfkahks vlasfsnyfk mlfvhqtsec
       61 vrlkatdiqp difsyllhlm ytgkmapqli dpvrleqgik flhaypliqe aslasqgtfs
      121 hpdqvfplas slygiqiadh qirhptkvts atdklgrepr pqtsrmnqeq asegsqlsql
      181 ganlpqvtrt nmsasdplps slspelvsaa gnnspsgeea nmeasssdeq pasltiahvk
      241 psimkrngsf pkyyachlcg rrfnlrsslr ehlqihtgvp ftssqqgesn islslcnnta
      301 dkdamevpea gmisdselqq isdspiidgq qqsetpppsd iadidnleqa dqerevkrrk
      361 yecsicgrkf iqkshwrehm yihtgkpfkc stcdksfcra nqaarhvcln qsmdtytmvd
      421 kqtlelctfe egsqmdnmlv qtnkpykcnl cdktfstpne vvkhscqnqn svftleedrs
      481 illgggdtea tetdnavlas ikkeqeavll d
//
LOCUS       XP_041325872             393 aa            linear   VRT 06-MAY-2021
DEFINITION  radial spoke head protein 3 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041325872
VERSION     XP_041325872.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469938.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="radial spoke head protein 3 homolog"
                     /calculated_mol_wt=44573
     Region          52..335
                     /region_name="Radial_spoke_3"
                     /note="Radial spoke protein 3; pfam06098"
                     /db_xref="CDD:461827"
     CDS             1..393
                     /gene="RSPH3"
                     /coded_by="XM_041469938.1:16..1197"
                     /db_xref="GeneID:121354891"
ORIGIN      
        1 meptvvpvra teltapadgp ysfssqprsl psrpkyreqs naaetekapv rygnimidpr
       61 vvrgnvlsfr ppppqstesh tlevkrqrra qkqllarkft qeqvqpgtpe pvegrehvyv
      121 qtelyleeis driievdgec qtdefldrpp tplfipaksg kdvatqikeg elfdfdievk
      181 pilevlvgkt veqallevme eeelaqlwsh qrafaelrna efaelqrlee qdrrireeke
      241 rrrlehlekl rkqketaeki aarafaqryl adlipsvfnn lhdsgffydp ierdietefl
      301 pwlmseveet lqkkvlgrtm ldslirtvve krldefshpp psaqtkapae epgatdaapk
      361 vsgeagaadq pvaekeetdq pvaeeepsds tss
//
LOCUS       XP_041325874              77 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-dependent protein kinase inhibitor beta [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325874
VERSION     XP_041325874.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469940.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..77
                     /product="cAMP-dependent protein kinase inhibitor beta"
                     /calculated_mol_wt=7724
     Region          2..70
                     /region_name="PKI"
                     /note="cAMP-dependent protein kinase inhibitor; pfam02827"
                     /db_xref="CDD:460716"
     CDS             1..77
                     /gene="PKIB"
                     /coded_by="XM_041469940.1:113..346"
                     /db_xref="GeneID:121354892"
ORIGIN      
        1 mtdvepvvtd fvssgrsgrr nalpdilgsp agagtselph klaelsvsed agaeggevss
       61 skallesqea egkrnds
//
LOCUS       XP_041325875              77 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-dependent protein kinase inhibitor beta [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325875
VERSION     XP_041325875.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469941.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..77
                     /product="cAMP-dependent protein kinase inhibitor beta"
                     /calculated_mol_wt=7724
     Region          2..70
                     /region_name="PKI"
                     /note="cAMP-dependent protein kinase inhibitor; pfam02827"
                     /db_xref="CDD:460716"
     CDS             1..77
                     /gene="PKIB"
                     /coded_by="XM_041469941.1:160..393"
                     /db_xref="GeneID:121354892"
ORIGIN      
        1 mtdvepvvtd fvssgrsgrr nalpdilgsp agagtselph klaelsvsed agaeggevss
       61 skallesqea egkrnds
//
LOCUS       XP_041325876              77 aa            linear   VRT 06-MAY-2021
DEFINITION  cAMP-dependent protein kinase inhibitor beta [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325876
VERSION     XP_041325876.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469942.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..77
                     /product="cAMP-dependent protein kinase inhibitor beta"
                     /calculated_mol_wt=7724
     Region          2..70
                     /region_name="PKI"
                     /note="cAMP-dependent protein kinase inhibitor; pfam02827"
                     /db_xref="CDD:460716"
     CDS             1..77
                     /gene="PKIB"
                     /coded_by="XM_041469942.1:91..324"
                     /db_xref="GeneID:121354892"
ORIGIN      
        1 mtdvepvvtd fvssgrsgrr nalpdilgsp agagtselph klaelsvsed agaeggevss
       61 skallesqea egkrnds
//
LOCUS       XP_041325877             617 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-like protein 3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325877
VERSION     XP_041325877.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469943.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..617
                     /product="synaptotagmin-like protein 3 isoform X1"
                     /calculated_mol_wt=70149
     Region          10..122
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          60..107
                     /region_name="FYVE_Slp3"
                     /note="FYVE-related domain found in synaptotagmin-like
                     protein 3 (Slp3) and similar proteins; cd15765"
                     /db_xref="CDD:277304"
     Region          308..434
                     /region_name="C2A_SLP-3"
                     /note="C2 domain first repeat present in
                     Synaptotagmin-like protein 3; cd08392"
                     /db_xref="CDD:176038"
     Region          450..609
                     /region_name="C2B_SLP_1-2-3-4"
                     /note="C2 domain second repeat present in
                     Synaptotagmin-like proteins 1-4; cd04020"
                     /db_xref="CDD:175987"
     CDS             1..617
                     /gene="SYTL3"
                     /coded_by="XM_041469943.1:682..2535"
                     /db_xref="GeneID:121354893"
ORIGIN      
        1 macefnlnfl kelereavle vlyrdqmvrk teeerirkmk lqlqqlrwkg aknarreyqe
       61 rscarcqksl glllnrgavc ngcshrvcse crvclnpclw kcticyahgd vkvkagewff
      121 eerakkypge grhetvgakl lesyqnlski svvpptpppf tespagtnvm gnelgeskrf
      181 nksvenlfls ltahmkkisk sqndmadrcv ltrdygknve rreqrrsqsd tainitsrmk
      241 stpslqqlit gaqydsetqs kssckeeedi ttsptsdtvf cdgrkhgsly slsstctesg
      301 nfgkanitge iefalkynfr acileicikg cknlaygeek kkkcnpyvkv yllpdkspws
      361 krktaikkst vdpefdetlk ykiehsqlrs rqlqisvwha galkyrvflg qvviplaawn
      421 feedsmqfdw yplkpklekp eddliqyste llmsarlsvp aqyqniqfeg nkdqgvltcq
      481 lqvmilgakn lpvlrsagml nsfvkgclil pdqaevkqks pvvkkeacpq wkhlfvfdgv
      541 tpaqlqrscl hltvwhkstf sssdqflgga klgakeffgs mdlasqgvlq wqevlrnpnt
      601 wmdftlvlhs nkenfks
//
LOCUS       XP_041325878             579 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-like protein 3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325878
VERSION     XP_041325878.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469944.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..579
                     /product="synaptotagmin-like protein 3 isoform X2"
                     /calculated_mol_wt=65436
     Region          22..69
                     /region_name="FYVE_Slp3"
                     /note="FYVE-related domain found in synaptotagmin-like
                     protein 3 (Slp3) and similar proteins; cd15765"
                     /db_xref="CDD:277304"
     Region          270..396
                     /region_name="C2A_SLP-3"
                     /note="C2 domain first repeat present in
                     Synaptotagmin-like protein 3; cd08392"
                     /db_xref="CDD:176038"
     Region          412..571
                     /region_name="C2B_SLP_1-2-3-4"
                     /note="C2 domain second repeat present in
                     Synaptotagmin-like proteins 1-4; cd04020"
                     /db_xref="CDD:175987"
     CDS             1..579
                     /gene="SYTL3"
                     /coded_by="XM_041469944.1:257..1996"
                     /db_xref="GeneID:121354893"
ORIGIN      
        1 mklqlqqlrw kgaknarrey qerscarcqk slglllnrga vcngcshrvc secrvclnpc
       61 lwkcticyah gdvkvkagew ffeerakkyp gegrhetvga kllesyqnls kisvvpptpp
      121 pftespagtn vmgnelgesk rfnksvenlf lsltahmkki sksqndmadr cvltrdygkn
      181 verreqrrsq sdtainitsr mkstpslqql itgaqydset qskssckeee dittsptsdt
      241 vfcdgrkhgs lyslsstcte sgnfgkanit geiefalkyn fracileici kgcknlayge
      301 ekkkkcnpyv kvyllpdksp wskrktaikk stvdpefdet lkykiehsql rsrqlqisvw
      361 hagalkyrvf lgqvviplaa wnfeedsmqf dwyplkpkle kpeddliqys tellmsarls
      421 vpaqyqniqf egnkdqgvlt cqlqvmilga knlpvlrsag mlnsfvkgcl ilpdqaevkq
      481 kspvvkkeac pqwkhlfvfd gvtpaqlqrs clhltvwhks tfsssdqflg gaklgakeff
      541 gsmdlasqgv lqwqevlrnp ntwmdftlvl hsnkenfks
//
LOCUS       XP_041325879             399 aa            linear   VRT 06-MAY-2021
DEFINITION  ezrin [Pyrgilauda ruficollis].
ACCESSION   XP_041325879
VERSION     XP_041325879.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469945.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..399
                     /product="ezrin"
                     /calculated_mol_wt=47420
     Region          13..109
                     /region_name="FERM_C_ERM"
                     /note="FERM domain C-lobe/F3 of the ERM family; cd13194"
                     /db_xref="CDD:270015"
     Site            order(55..56,58..64,73,94,97..98,101)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:270015"
     Site            order(55,58..65,73,94,97..98,101)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:270015"
     Site            order(91,95)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270015"
     Site            94..109
                     /site_type="other"
                     /note="actin binding site 2 [polypeptide binding]"
                     /db_xref="CDD:270015"
     Region          150..269
                     /region_name="ERM_helical"
                     /note="Ezrin/radixin/moesin, alpha-helical domain;
                     pfam20492"
                     /db_xref="CDD:466641"
     Region          323..399
                     /region_name="ERM_C"
                     /note="Ezrin/radixin/moesin family C terminal; pfam00769"
                     /db_xref="CDD:459932"
     CDS             1..399
                     /gene="EZR"
                     /coded_by="XM_041469945.1:11..1210"
                     /db_xref="GeneID:121354894"
ORIGIN      
        1 mleylkiaqd lemyginyfe iknkkgtdlw lgvdalglni yekddkltpk igfpwseirn
       61 isfndkkfvi kpidkkapdf vfyaprlrin krilqlcmgn helymrrrkp dtievqqmka
      121 qareekhqkq lerkqledek krretierek eqmlrekeel lvrlqeyevk tqkaekelsd
      181 qiqraiqlee erkraqeeae rleaerlaal qakeelerqt mdqiksqeql atelaeytak
      241 ialleearkr keseveewqi rareaqedlv ktkeelhlvm tapppppppv yepvnyhvhd
      301 nlqdegseys aysaefsseg irndrneekr iteaeknarv qsqlraltde laqarhedkr
      361 tqndiihsen mrqgrdkykt lrqirqgntk qridefeam
//
LOCUS       XP_041325881             319 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354896 [Pyrgilauda ruficollis].
ACCESSION   XP_041325881
VERSION     XP_041325881.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469947.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..319
                     /product="uncharacterized protein LOC121354896"
                     /calculated_mol_wt=35371
     CDS             1..319
                     /gene="LOC121354896"
                     /coded_by="XM_041469947.1:440..1399"
                     /db_xref="GeneID:121354896"
ORIGIN      
        1 mknmylflls ilplllkvtg tknvifghnn fteyqvgnmn lilsvphggs mepkdipdre
       61 aacwdaktss cifshdcppg siqnamkckv stnqdrytie vaqalaeein kitdgffphi
      121 iinhlqrfkm danrekeeas fgiplaeqaw edymgfltta ksqmsgglil dihgqahrer
      181 wielgytlsk stlnsgvfsa snssishlas qlvnvssktl vagnrslgky iegqnksyvc
      241 vpspsnpspn ngsyysggyi tktfgsrssg tidaiqlelp qwvraaeerq rfckalarav
      301 mkfwqtnycs qqkhkllpc
//
LOCUS       XP_041325882             319 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354896 [Pyrgilauda ruficollis].
ACCESSION   XP_041325882
VERSION     XP_041325882.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469948.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..319
                     /product="uncharacterized protein LOC121354896"
                     /calculated_mol_wt=35371
     CDS             1..319
                     /gene="LOC121354896"
                     /coded_by="XM_041469948.1:437..1396"
                     /db_xref="GeneID:121354896"
ORIGIN      
        1 mknmylflls ilplllkvtg tknvifghnn fteyqvgnmn lilsvphggs mepkdipdre
       61 aacwdaktss cifshdcppg siqnamkckv stnqdrytie vaqalaeein kitdgffphi
      121 iinhlqrfkm danrekeeas fgiplaeqaw edymgfltta ksqmsgglil dihgqahrer
      181 wielgytlsk stlnsgvfsa snssishlas qlvnvssktl vagnrslgky iegqnksyvc
      241 vpspsnpspn ngsyysggyi tktfgsrssg tidaiqlelp qwvraaeerq rfckalarav
      301 mkfwqtnycs qqkhkllpc
//
LOCUS       XP_041325883             319 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121354896 [Pyrgilauda ruficollis].
ACCESSION   XP_041325883
VERSION     XP_041325883.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469949.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..319
                     /product="uncharacterized protein LOC121354896"
                     /calculated_mol_wt=35371
     CDS             1..319
                     /gene="LOC121354896"
                     /coded_by="XM_041469949.1:66..1025"
                     /db_xref="GeneID:121354896"
ORIGIN      
        1 mknmylflls ilplllkvtg tknvifghnn fteyqvgnmn lilsvphggs mepkdipdre
       61 aacwdaktss cifshdcppg siqnamkckv stnqdrytie vaqalaeein kitdgffphi
      121 iinhlqrfkm danrekeeas fgiplaeqaw edymgfltta ksqmsgglil dihgqahrer
      181 wielgytlsk stlnsgvfsa snssishlas qlvnvssktl vagnrslgky iegqnksyvc
      241 vpspsnpspn ngsyysggyi tktfgsrssg tidaiqlelp qwvraaeerq rfckalarav
      301 mkfwqtnycs qqkhkllpc
//
LOCUS       XP_041325884             208 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium/potassium-transporting ATPase subunit beta-1-interacting
            protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325884
VERSION     XP_041325884.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469950.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="sodium/potassium-transporting ATPase subunit
                     beta-1-interacting protein 2"
                     /calculated_mol_wt=23615
     Region          1..207
                     /region_name="NKAIN"
                     /note="Na,K-Atpase Interacting protein; pfam05640"
                     /db_xref="CDD:461699"
     CDS             1..208
                     /gene="NKAIN2"
                     /coded_by="XM_041469950.1:45..671"
                     /db_xref="GeneID:121354897"
ORIGIN      
        1 mgycsgrctl vavcgaqlvs vlerqifdfl gyqwapilan fihiiivilg lfgtiqyrpr
       61 yitgyavwlv lwvtwnvfvi cfyleagdls ketdliltfn ismhrswwme ngpgctvtsv
      121 tpapdwaped hryitvsgcf leyqyievah sslqiflala gfiyacyvvk citeeedsfd
      181 figgfdsygy qgpqktshlq lqpmymsk
//
LOCUS       XP_041325885             256 aa            linear   VRT 06-MAY-2021
DEFINITION  dimethyladenosine transferase 1, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325885
VERSION     XP_041325885.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469951.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="dimethyladenosine transferase 1, mitochondrial
                     isoform X1"
                     /calculated_mol_wt=29516
     Region          <5..214
                     /region_name="RsmA"
                     /note="16S rRNA A1518 and A1519 N6-dimethyltransferase
                     RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase
                     activity) [Translation, ribosomal structure and
                     biogenesis]; COG0030"
                     /db_xref="CDD:439801"
     CDS             1..256
                     /gene="TFB1M"
                     /coded_by="XM_041469951.1:1..771"
                     /db_xref="GeneID:121354898"
ORIGIN      
        1 mlseaapgkv rivhgdilty kmekafpkhl kkdwddeppd ihiignlpfs vstpliikwl
       61 qnvskrdgpf iygrtqmtlt fqkevgerlt anpgsnqrsr lsimaqhlct vencfiipgq
      121 afvpkpevdv avvhftplvq pkiqqpfelv ekvvqsvfqf rrkycfrgie tlfpengrlk
      181 rteqlmmtan vdptlrpfql smsqfrnlcn ayrkmcdedp slfvfnyree lrqkkmtrsl
      241 lgstgqpert eeenql
//
LOCUS       XP_041325886             351 aa            linear   VRT 06-MAY-2021
DEFINITION  dimethyladenosine transferase 1, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325886
VERSION     XP_041325886.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469952.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..351
                     /product="dimethyladenosine transferase 1, mitochondrial
                     isoform X2"
                     /calculated_mol_wt=39752
     Region          22..309
                     /region_name="RsmA"
                     /note="16S rRNA A1518 and A1519 N6-dimethyltransferase
                     RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase
                     activity) [Translation, ribosomal structure and
                     biogenesis]; COG0030"
                     /db_xref="CDD:439801"
     CDS             1..351
                     /gene="TFB1M"
                     /coded_by="XM_041469952.1:69..1124"
                     /db_xref="GeneID:121354898"
ORIGIN      
        1 maapgkvaaf rlpplptige iiklfrlkal kqlsqnflld lrltdkivkq agelknahvc
       61 evgpgpggit rsilsagveq llliekdarf ipglqmlsea apgkvrivhg diltykmeka
      121 fpkhlkkdwd deppdihiig nlpfsvstpl iikwlqnvsk rdgpfiygrt qmtltfqkev
      181 gerltanpgs nqrsrlsima qhlctvencf iipgqafvpk pevdvavvhf tplvqpkiqq
      241 pfelvekvvq svfqfrrkyc frgietlfpe ngrlkrteql mmtanvdptl rpfqlsmsqf
      301 rnlcnayrkm cdedpslfvf nyreelrqkk mtrsllgstg qperteeenq l
//
LOCUS       XP_041325887             219 aa            linear   VRT 06-MAY-2021
DEFINITION  claudin-20 [Pyrgilauda ruficollis].
ACCESSION   XP_041325887
VERSION     XP_041325887.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469953.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="claudin-20"
                     /calculated_mol_wt=23667
     Region          5..181
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..219
                     /gene="CLDN20"
                     /coded_by="XM_041469953.1:56..715"
                     /db_xref="GeneID:121354899"
ORIGIN      
        1 masaslqffa filalfgafg diaatllpnw kvnadvgsni itaitqmqgl wmdctwystg
       61 mfsctlkysi lslpvyiqaa rttmvlscil safgicittv gmkctrlggd tdsknnacfa
      121 ggicfilagi fglvptcwyt reiisnfldq tipesskhep ggavytgfis agflliagvi
      181 fcsscfkrqq gawiyppkqh hfpsteqesn agyslkdyv
//
LOCUS       XP_041325888            1721 aa            linear   VRT 06-MAY-2021
DEFINITION  T-lymphoma invasion and metastasis-inducing protein 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325888
VERSION     XP_041325888.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469954.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1721
                     /product="T-lymphoma invasion and metastasis-inducing
                     protein 2"
                     /calculated_mol_wt=193916
     Region          506..632
                     /region_name="PH1_Tiam1_2"
                     /note="T-lymphoma invasion and metastasis 1 and 2
                     Pleckstrin Homology (PH) domain, N-terminal domain;
                     cd01230"
                     /db_xref="CDD:269937"
     Region          646..743
                     /region_name="Tiam_CC_Ex"
                     /note="T-lymphoma invasion and metastasis CC-Ex domain;
                     pfam18385"
                     /db_xref="CDD:408184"
     Region          834..904
                     /region_name="Ubl1_cv_Nsp3_N-like"
                     /note="first ubiquitin-like (Ubl) domain located at the
                     N-terminus of coronavirus SARS-CoV non-structural protein
                     3 (Nsp3) and related proteins; cl28922"
                     /db_xref="CDD:475130"
     Region          913..994
                     /region_name="PDZ_canonical"
                     /note="canonical PDZ domain; cd00136"
                     /db_xref="CDD:467153"
     Site            order(924..930,945,948,977,981,984)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467153"
     Region          1121..1310
                     /region_name="RhoGEF"
                     /note="Guanine nucleotide exchange factor for
                     Rho/Rac/Cdc42-like GTPases; smart00325"
                     /db_xref="CDD:214619"
     Site            order(1124,1128,1234,1260..1261,1264..1265,1267..1268,
                     1271..1272,1275..1276,1279,1305,1309)
                     /site_type="other"
                     /note="GTPase interaction site [polypeptide binding]"
                     /db_xref="CDD:238091"
     Region          1312..1484
                     /region_name="PH2_Tiam1_2"
                     /note="T-lymphoma invasion and metastasis 1 and 2
                     Pleckstrin Homology (PH) domain, C-terminal domain;
                     cd01255"
                     /db_xref="CDD:269957"
     CDS             1..1721
                     /gene="TIAM2"
                     /coded_by="XM_041469954.1:239..5404"
                     /db_xref="GeneID:121354900"
ORIGIN      
        1 mgnsesqysl qgsknhaatt agakqkpcsl kirsihakde kscsmhgwgh tnsgsnyksr
       61 slarsclshf kssqpyssrl gdtvmkvsks nvhakhrtna sgdycqgnnm mflpengfhy
      121 iglqagsnha asrecnghil ncygknesla stspsedrrs pkvliktlgk ldgclrvefh
      181 nsnnskvpte essgpvqllr yspaleskpn nlldvrrnss adcssshrls ptdsrlrssk
      241 gsslssessw ydslwgnagd ineldgsylt rstpdtsiha sfpasdnkks fnqssslssl
      301 rdlykdtnle stpppgirls deyidtpgsl snrvsfasdi dvpsrveqgs pahytsytlp
      361 crkskplged askkdtlknr mrrisdwtgs lsrkkrklqe pkckdgseyf dsrmdnfttd
      421 tlapsqlstl lwspgsshal sqrsestnav ssdalrqniy enfmrelems rmnlentets
      481 setedssges lssleqldll yekeqgvvrk agwlffkplv tlqkekklel vtrrkwkqyw
      541 vtlkgctllf yetygrnsme qsslpryalf aedsivqsvp ehpkkenvfc lsnsfgdvyl
      601 fqatsqtdle nwvtaihsac aslfakklgk edtvrllknq tkslfqkidm dgkmkkmael
      661 qlsivsdpkn rkaienqiqq weqnlekfnm dlfrmrcyls slqggelpnp ksllaaasrp
      721 sklalgrlgi fsvssfhali csrdeaalrk rtlslsqrvr nkkglfsslk gldtlarkgk
      781 ekrpsitqvf dtagghgfsg mqnsansaeq vddflnvycs vpesiqkena wetqtyvhfc
      841 dgqavaltlk pehrvedvls lackmkqlep rhyglqlrrl vdenteycap epyeyivdqv
      901 ydeieicpln vyhvhltkte nisdygfavt aqvaenehlt hifvsdvlpd glaykeglrv
      961 gneilsinge avsdldlrqm ellfsersvm ltvrtsqqpl cvswsdgdis rdpksllppp
     1021 nqsqlleefl dnfkkntand fsnvpditss lkrsstdgtl dqvphrektd ppfrsaeqis
     1081 alcrnfqevq asnmegqkds qdppprplar hlsdadrlrk viqelmdtek syvkdlsclf
     1141 elyleplqke tfltqdemes lfgslpemld fqkvfletle dgissssdfn tletpsqfrk
     1201 llfslggsfl yyadhfklys gfcanhikvq kvleraktds afktfldarn ptkqhsstle
     1261 sylikpvqrv lkyplllkel vsltdnesee hyhltealka mekvashine mqkiyedygt
     1321 vfdqlvaeqs gtekevtels mgellmhstv twlnpfpslg karkdleltv fvfkravilv
     1381 ykenyklkkk mptnvravhn ygdldpfkfr wliplsalqv rlgntagten nciwelihtk
     1441 selegrpeti fqlcssdsen ktnivkvirs ilrenfrrhi kcelplekks kdrliplknr
     1501 vpataklast rslkvlkkss ssewngdqgk gtfqdsdecs lssstqsssc htsesiqepk
     1561 nsspnkhaen tasdfsnvlv kesdilsddd ddedyrslkk gsptkdieiq fqrlkiseep
     1621 sadseqdqaa eneeedgfqi aqhpklvrgh fcpvkrkvns tkrsrgtlma mqerhqslds
     1681 hsdtanldln silerefsvq sltsvvnedc fyeaverhgk s
//
LOCUS       XP_041325889             416 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA helicase MCM9 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325889
VERSION     XP_041325889.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469955.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="DNA helicase MCM9 isoform X1"
                     /calculated_mol_wt=46087
     Region          4..>386
                     /region_name="Mcm2"
                     /note="DNA replicative helicase MCM subunit Mcm2,
                     Cdc46/Mcm family [Replication, recombination and repair];
                     COG1241"
                     /db_xref="CDD:440854"
     CDS             1..416
                     /gene="MCM9"
                     /coded_by="XM_041469955.1:274..1524"
                     /db_xref="GeneID:121354902"
ORIGIN      
        1 mvlsadqvsl igqvfesyvl ehhrdeilai lreaddqahy pvvvdaltlf etnmeigeyf
       61 nafpsevlpi fdsalrraal aalqesaepa qlslkqnlha rvsglpvcpe ltrehipksk
      121 dvghflsvtg tvirtssvkv lefersyicn kckhvfavka dfeqyyafcr paaclneegc
      181 nstkfmclsg ttssptccrd yqeikiqeqv qrlsvgsipr cmvvvleddl vdscksgddi
      241 tvygvvmqrw kpfhegarcd lelvlkanyv kvnneqlagv videevrkef edfwerhknd
      301 plagrneila slcpqvfgly lvklavamvl aggvqrtdaa gtrtrgeshl llvgdpgtgk
      361 sqflkyavki mprsvltagi gstsagmsql afnarhlckl fwdhvqgqmt sandfi
//
LOCUS       XP_041325890            1158 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA helicase MCM9 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325890
VERSION     XP_041325890.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469956.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1158
                     /product="DNA helicase MCM9 isoform X2"
                     /calculated_mol_wt=127851
     Region          4..607
                     /region_name="Mcm2"
                     /note="DNA replicative helicase MCM subunit Mcm2,
                     Cdc46/Mcm family [Replication, recombination and repair];
                     COG1241"
                     /db_xref="CDD:440854"
     Region          307..605
                     /region_name="MCM9"
                     /note="DNA helicase Mcm9; cd17760"
                     /db_xref="CDD:350666"
     Site            order(316,357,359..362,417,484,503,568..569)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350666"
     CDS             1..1158
                     /gene="MCM9"
                     /coded_by="XM_041469956.1:274..3750"
                     /db_xref="GeneID:121354902"
ORIGIN      
        1 mvlsadqvsl igqvfesyvl ehhrdeilai lreaddqahy pvvvdaltlf etnmeigeyf
       61 nafpsevlpi fdsalrraal aalqesaepa qlslkqnlha rvsglpvcpe ltrehipksk
      121 dvghflsvtg tvirtssvkv lefersyicn kckhvfavka dfeqyyafcr paaclneegc
      181 nstkfmclsg ttssptccrd yqeikiqeqv qrlsvgsipr cmvvvleddl vdscksgddi
      241 tvygvvmqrw kpfhegarcd lelvlkanyv kvnneqlagv videevrkef edfwerhknd
      301 plagrneila slcpqvfgly lvklavamvl aggvqrtdaa gtrtrgeshl llvgdpgtgk
      361 sqflkyavki mprsvltagi gstsagltvt avkefgewnl eagalvladg glccidefns
      421 ikehdrtsih eameqqtisv akaglvckls trttilaatn pkghydpnes vsvnialgsp
      481 llsrfdlvlv lldtkneewd hiissfilqn kgcpsqsekl wsmermktyf cliksiqpkl
      541 sdesnlilvr yyqmqrqsdc rnaarttirl leslirlaea harlmfrdtv tledavtvvs
      601 vmessmqgga llgginalht sfpenpmeqy rtqceviler lelkdllhke lqrldrlqme
      661 nscqqhpeet nsnptircsn ddafgqskqr sqsepsnqeg dnsgpqtpll egsceenihl
      721 eplcnpahgn nrnasslawf dsmeessida eensqrkshv pkispnnlas ktsgsedssa
      781 siprkqngir espasvdlha plkqkdkvsk lrrkrteehn csssddsitd papsasvqds
      841 virqhasrsw krlhreksyg fftstqdpea kalpsvlpas glpdlssdad svlgeensia
      901 vaakstavsi kkrskdqvvk etkvvssheq gsesppaakl akfsfrprtk lghspektne
      961 efshfpseti fkpgeqlqge qlpeeccppe kskmtltrlg kcslekrsid nkgeeeqqsr
     1021 algkeirese airsdvsfga vsppptekkr eaeeklggps tgkvrsstla klstfsfvsr
     1081 peaksetspa ikkdaskesh spslqvhvsn pskrrsfafg nsstasvvtk tslfsiaeld
     1141 datldfdwdk evrknpst
//
LOCUS       XP_041325891             204 aa            linear   VRT 06-MAY-2021
DEFINITION  histone chaperone ASF1A [Pyrgilauda ruficollis].
ACCESSION   XP_041325891
VERSION     XP_041325891.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469957.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..204
                     /product="histone chaperone ASF1A"
                     /calculated_mol_wt=22838
     Region          1..154
                     /region_name="ASF1_hist_chap"
                     /note="ASF1 like histone chaperone; pfam04729"
                     /db_xref="CDD:461412"
     CDS             1..204
                     /gene="ASF1A"
                     /coded_by="XM_041469957.1:325..939"
                     /db_xref="GeneID:121354903"
ORIGIN      
        1 makvqvnnvv vldnpspfyn pfqfeitfec iedlsedlew kiiyvgsaes eeydqvldsv
       61 lvgpvpagrh mfvfqadapn pglipdadav gvtvvlitct yrgqefirvg yyvnneytet
      121 elrenppvkp dfsklqrnil asnprvtrfh inwedntekl edaessnpnl qsllstdalp
      181 saskgwstse nslnvmlesh mdcm
//
LOCUS       XP_041325892             275 aa            linear   VRT 06-MAY-2021
DEFINITION  R-spondin-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325892
VERSION     XP_041325892.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469958.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="R-spondin-3"
                     /calculated_mol_wt=31262
     Region          42..142
                     /region_name="Furin-like_2"
                     /note="Furin-like repeat, cysteine-rich; pfam15913"
                     /db_xref="CDD:464939"
     Region          148..203
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; pfam19028"
                     /db_xref="CDD:465948"
     CDS             1..275
                     /gene="RSPO3"
                     /coded_by="XM_041469958.1:165..992"
                     /db_xref="GeneID:121354904"
ORIGIN      
        1 mqlrliswff itlnfmeyig sqhasrvrrq grmhpnvsqg cqggcatcsd yngclsckpr
       61 lffvlerigm kqigvclssc psgyygtryp dinkcakcka dcdtcftrnf ctkcksgfyl
      121 ysgkclekcp dgleannhtm ectsivhcet sewspwspcm kkgktcgfkr gnevrvkeii
      181 qhpsargnpc pattesrkci vqrkrcqkeg kgkknreekr kksnkdeske trqeskgraa
      241 rrqnreqren nnktqpkkrk apnkeqdlap adtah
//
LOCUS       XP_041325894             333 aa            linear   VRT 06-MAY-2021
DEFINITION  trace amine-associated receptor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325894
VERSION     XP_041325894.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469960.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..333
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..333
                     /product="trace amine-associated receptor 1"
                     /calculated_mol_wt=38281
     Region          23..312
                     /region_name="7tmA_TAAR1"
                     /note="trace amine-associated receptor 1 and similar
                     receptors, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15314"
                     /db_xref="CDD:320438"
     Region          24..50
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320438"
     Region          57..83
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320438"
     Region          95..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320438"
     Site            order(98,102..103,106..107,182,189,192..193,196,261,
                     264..265,268,283,287,291)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320438"
     Region          137..160
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320438"
     Region          185..214
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320438"
     Region          241..271
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320438"
     Region          280..305
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320438"
     CDS             1..333
                     /gene="TAAR1"
                     /coded_by="XM_041469960.1:317..1318"
                     /db_xref="GeneID:121354905"
ORIGIN      
        1 mqlccesvns scirstwsns irismyifmv ciilatvvgn ltviisishf kqlhtptnfl
       61 ilsmamvdfl lgffimpcsm vrsvehcwyf geffckihss mdimlstasi fhlsfisidr
      121 yyavcdplry kskintfviv vmvciswmvp aafafgmifl dlnlkgaeki ynhvycaggc
      181 flifsetsgi vasivsfyip gfvmlyiyrk iysvakkqar sinaisrkkm qfemkhhisf
      241 crerkaaktl giimgaflic wtpfffftat npfmnyvipp vlidalvwfg ylnstlnpiv
      301 yaffymwfrr alkiilfgkv fqqdssrthl fsd
//
LOCUS       XP_041325895             321 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal biogenesis factor 7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325895
VERSION     XP_041325895.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469961.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="peroxisomal biogenesis factor 7 isoform X1"
                     /calculated_mol_wt=35298
     Region          18..64
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          66..312
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Region          68..107
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Site            order(83,87,93..94,107..108,127,132,138..139,152,170,175,
                     181..182,194..195,214,218,224..225,238..239,257,262,
                     268..269,281..282,302,306,312)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          113..151
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          156..193
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          200..237
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          243..281
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..321
                     /gene="PEX7"
                     /coded_by="XM_041469961.1:41..1006"
                     /db_xref="GeneID:121354906"
ORIGIN      
        1 mgtaagagal rlpglhgyav efspycpgrv acaaaqyygm agcgtlavle qneagivllr
       61 sfdwndglfd vtwsennenm litcsgdgsl qiwdiaktkg plqvykehtl eaysvdwsqt
      121 rgeqlvvsgs wdqtaklwdp avgkslctfk gheaviysti wsphipgcfa sasgdqtlri
      181 wdvktpgvkl vipahqaevl scdwckyden llvtgavdcs lkgwdlrnir qpvfvllght
      241 yairrvkfsp fhatilascs ydftvrfwdf skpnplletv ehhteftcgl dlslhnrgqv
      301 vdcawdelvk iytpsclavp v
//
LOCUS       XP_041325896             283 aa            linear   VRT 06-MAY-2021
DEFINITION  peroxisomal biogenesis factor 7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325896
VERSION     XP_041325896.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469962.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="peroxisomal biogenesis factor 7 isoform X2"
                     /calculated_mol_wt=30993
     Region          <65..274
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          68..105
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          113..150
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          156..191
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..243
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          250..274
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..283
                     /gene="PEX7"
                     /coded_by="XM_041469962.1:41..892"
                     /db_xref="GeneID:121354906"
ORIGIN      
        1 mgtaagagal rlpglhgyav efspycpgrv acaaaqyygm agcgtlavle qneagivllr
       61 sfdwndglfd vtwsennenm litcsgdgsl qiwdiaktkg plqvykehtl eaysvdwsqt
      121 rgeqlvvsgs wdqtaklwdp avgkslctfk gheaviysti wsphipgcfa sasgdqtlri
      181 wdvktpgvkl vipahqaevl scdwckydef spfhatilas csydftvrfw dfskpnplle
      241 tvehhteftc gldlslhnrg qvvdcawdel vkiytpscla vpv
//
LOCUS       XP_041325897             168 aa            linear   VRT 06-MAY-2021
DEFINITION  histidine triad nucleotide-binding protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325897
VERSION     XP_041325897.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469963.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="histidine triad nucleotide-binding protein 3"
                     /calculated_mol_wt=18533
     Region          28..131
                     /region_name="HIT_like"
                     /note="HIT family: HIT (Histidine triad) proteins, named
                     for a motif related to the sequence HxHxH/Qxx (x, a
                     hydrophobic amino acid), are a superfamily of nucleotide
                     hydrolases and transferases, which act on the
                     alpha-phosphate of ribonucleotides. On the basis...;
                     cl00228"
                     /db_xref="CDD:469672"
     Site            order(55,57,65,67,113,122,126,128)
                     /site_type="active"
                     /note="nucleotide binding site/active site [active]"
                     /db_xref="CDD:238263"
     Site            order(124,126,128..130)
                     /site_type="active"
                     /note="HIT family signature motif [active]"
                     /db_xref="CDD:238263"
     Site            126
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:238263"
     CDS             1..168
                     /gene="HINT3"
                     /coded_by="XM_041469963.1:35..541"
                     /db_xref="GeneID:121354907"
ORIGIN      
        1 magpeaagaa aaegseagng grdgydgkcv fcriarreep gtallpcqde dlvcfrdikp
       61 gaphhylvvp vkhmgncktl ktehiplvkr mmevgkavlq qnnfndlndv rmgfhwppfc
      121 siahlhlhvl apasqmgfls riyyrinsyw fitaeqlier lqtenaas
//
LOCUS       XP_041325898             210 aa            linear   VRT 06-MAY-2021
DEFINITION  regulator of G-protein signaling 17 [Pyrgilauda ruficollis].
ACCESSION   XP_041325898
VERSION     XP_041325898.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469964.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="regulator of G-protein signaling 17"
                     /calculated_mol_wt=24177
     Region          41..197
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     CDS             1..210
                     /gene="RGS17"
                     /coded_by="XM_041469964.1:189..821"
                     /db_xref="GeneID:121354908"
ORIGIN      
        1 mrkrqqsqne gtsavsqapg nqrpnntccf cwccccscsc ltvrnedrgd nagrpthttk
       61 lesiqvieec qnptadeils waqnfdkmmk tpagrnlfre flrteyseen llfwlacedl
      121 kkeqnkkvie ekarliyedy isilspkevs ldsrvrevin rnlldpsphm yedaqlqiyt
      181 lmhrdsfprf lnsqiykslv esitgstset
//
LOCUS       XP_041325899              76 aa            linear   VRT 06-MAY-2021
DEFINITION  centromere protein W [Pyrgilauda ruficollis].
ACCESSION   XP_041325899
VERSION     XP_041325899.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469965.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..76
                     /product="centromere protein W"
                     /calculated_mol_wt=8524
     Region          3..76
                     /region_name="HFD_CENP-W"
                     /note="histone-fold domain found in centromere protein W
                     (CENP-W) and similar proteins; cd13732"
                     /db_xref="CDD:467029"
     Site            order(5..7,10,13..14,16..18,20..22,26..27,29..43,47,
                     56..60,63..64,67,71,73..76)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467029"
     Site            order(69,72..73,75..76)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:467029"
     CDS             1..76
                     /gene="CENPW"
                     /coded_by="XM_041469965.1:63..293"
                     /db_xref="GeneID:121354909"
ORIGIN      
        1 mkstaprstl rkiikkhkpq lrlaansdll vhltfllflh rlaeeartna fenkskiikp
       61 ehtisaakvi lkksrg
//
LOCUS       XP_041325900             675 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-taxilin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325900
VERSION     XP_041325900.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469966.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..675
                     /product="beta-taxilin isoform X1"
                     /calculated_mol_wt=76201
     Region          136..443
                     /region_name="Taxilin"
                     /note="Myosin-like coiled-coil protein; pfam09728"
                     /db_xref="CDD:462861"
     Region          <537..>630
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..675
                     /gene="TXLNB"
                     /coded_by="XM_041469966.1:172..2199"
                     /db_xref="GeneID:121354910"
ORIGIN      
        1 mendqsstsp gqdiqgqggd kpapglpspa pvpmeqphsw peaavcdise elsrqledii
       61 ktygsatslm ekestatgtd rpekgepgsl edaeyedgne esekeklapg daskakepsg
      121 nkeqklekki lkglgkeatl lmqslnklnt peekldllfk kyaelleehr aeqkklkylq
      181 krqaqitkek dqlqsehsra ilarsklesl crelqrhnkn lkeetiqrar eedekrkeit
      241 nhfqgtlsei qaqieqqser nmklcqente laeklksiid qyelreehld kifkhrelqq
      301 klvdakleqs qemmkeaeer hqkekeylln qaaewklqak mlkeqetvlq aqitlyserf
      361 eefqktlaks nevfatfkqe mekmtkkmkk lekdtatwks rfencnrall dmieekamrs
      421 keyecfmlki qrlenlcral qeernelykk ikqaqfseev ngngileeed dgeddtkttp
      481 spseqasiel hesdkrmlkq laeafrvshk aedslpsnss nsetcdtqtc nailvpeppa
      541 pltphseagk nfeqpststp apaesltvpt dnvakltkst pslpdrvptp tesvpmppqs
      601 vlvptgnmsi ptesmpatpe nvptptkntp islgnmpvpi qgppkaaecv ddpadrsvqg
      661 qsveqtgytd meavd
//
LOCUS       XP_041325901             675 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-taxilin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325901
VERSION     XP_041325901.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469967.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..675
                     /product="beta-taxilin isoform X1"
                     /calculated_mol_wt=76201
     Region          136..443
                     /region_name="Taxilin"
                     /note="Myosin-like coiled-coil protein; pfam09728"
                     /db_xref="CDD:462861"
     Region          <537..>630
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..675
                     /gene="TXLNB"
                     /coded_by="XM_041469967.1:217..2244"
                     /db_xref="GeneID:121354910"
ORIGIN      
        1 mendqsstsp gqdiqgqggd kpapglpspa pvpmeqphsw peaavcdise elsrqledii
       61 ktygsatslm ekestatgtd rpekgepgsl edaeyedgne esekeklapg daskakepsg
      121 nkeqklekki lkglgkeatl lmqslnklnt peekldllfk kyaelleehr aeqkklkylq
      181 krqaqitkek dqlqsehsra ilarsklesl crelqrhnkn lkeetiqrar eedekrkeit
      241 nhfqgtlsei qaqieqqser nmklcqente laeklksiid qyelreehld kifkhrelqq
      301 klvdakleqs qemmkeaeer hqkekeylln qaaewklqak mlkeqetvlq aqitlyserf
      361 eefqktlaks nevfatfkqe mekmtkkmkk lekdtatwks rfencnrall dmieekamrs
      421 keyecfmlki qrlenlcral qeernelykk ikqaqfseev ngngileeed dgeddtkttp
      481 spseqasiel hesdkrmlkq laeafrvshk aedslpsnss nsetcdtqtc nailvpeppa
      541 pltphseagk nfeqpststp apaesltvpt dnvakltkst pslpdrvptp tesvpmppqs
      601 vlvptgnmsi ptesmpatpe nvptptkntp islgnmpvpi qgppkaaecv ddpadrsvqg
      661 qsveqtgytd meavd
//
LOCUS       XP_041325902             534 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-taxilin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325902
VERSION     XP_041325902.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469968.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="beta-taxilin isoform X2"
                     /calculated_mol_wt=61182
     Region          1..302
                     /region_name="Taxilin"
                     /note="Myosin-like coiled-coil protein; pfam09728"
                     /db_xref="CDD:462861"
     Region          <396..>489
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     CDS             1..534
                     /gene="TXLNB"
                     /coded_by="XM_041469968.1:250..1854"
                     /db_xref="GeneID:121354910"
ORIGIN      
        1 mqslnklntp eekldllfkk yaelleehra eqkklkylqk rqaqitkekd qlqsehsrai
       61 larskleslc relqrhnknl keetiqrare edekrkeitn hfqgtlseiq aqieqqsern
      121 mklcqentel aeklksiidq yelreehldk ifkhrelqqk lvdakleqsq emmkeaeerh
      181 qkekeyllnq aaewklqakm lkeqetvlqa qitlyserfe efqktlaksn evfatfkqem
      241 ekmtkkmkkl ekdtatwksr fencnralld mieekamrsk eyecfmlkiq rlenlcralq
      301 eernelykki kqaqfseevn gngileeedd geddtkttps pseqasielh esdkrmlkql
      361 aeafrvshka edslpsnssn setcdtqtcn ailvpeppap ltphseagkn feqpststpa
      421 paesltvptd nvakltkstp slpdrvptpt esvpmppqsv lvptgnmsip tesmpatpen
      481 vptptkntpi slgnmpvpiq gppkaaecvd dpadrsvqgq sveqtgytdm eavd
//
LOCUS       XP_041325903             159 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1 regulatory subunit 14C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325903
VERSION     XP_041325903.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469969.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..159
                     /product="protein phosphatase 1 regulatory subunit 14C"
                     /calculated_mol_wt=17150
     Region          <65..159
                     /region_name="PP1_inhibitor"
                     /note="PKC-activated protein phosphatase-1 inhibitor;
                     pfam05361"
                     /db_xref="CDD:461630"
     CDS             1..159
                     /gene="PPP1R14C"
                     /coded_by="XM_041469969.1:116..595"
                     /db_xref="GeneID:121354912"
ORIGIN      
        1 msvatggsea aaaaaggggg nrvffqsprg gggsggssgs ssredsvsaa aavvqvqqrr
       61 hqqgkvtvky drkelrkrlv leewiveqlg qlygceeeem peveididdl ldaaneeera
      121 lklqetlvdc ykpteefike lltrirgmrk lsppqkksi
//
LOCUS       XP_041325904             532 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(A)-specific ribonuclease PNLDC1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325904
VERSION     XP_041325904.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469970.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..532
                     /product="poly(A)-specific ribonuclease PNLDC1"
                     /calculated_mol_wt=60446
     Region          22..373
                     /region_name="CAF1"
                     /note="CAF1 family ribonuclease; pfam04857"
                     /db_xref="CDD:461457"
     CDS             1..532
                     /gene="PNLDC1"
                     /coded_by="XM_041469970.1:1..1599"
                     /db_xref="GeneID:121354913"
ORIGIN      
        1 mdvgaegfaq rlprlrrril gatfvaldme ftglhstslq nnepslfdsp aeryakarqs
       61 vqrftlvqlg laifskenss kyvvhsynff lfpstlgird veftlsassi qflshygfdy
      121 nkffkdgipy mnevqekilr qqlsagtwkv cstsnadrdv lkkaidevts wiaaakeedt
      181 milqdlngyh iievqlvlrq alenvwtepl gdkkvmvkkv spehrqflen ssydhcqkkl
      241 illsargftn lfqilvkvkk plvghnmlmd lmhlhdkfyr plpesyeefk rnihnlfpvi
      301 idtktvtksv qkkclfprvs slleayavls ssnlnpkgpp cpvialasgc sryaekkfph
      361 eagydaflcg svllmsahll lckstddvve aepsfsqylt vlaedvnkvn firggvssin
      421 fsgedspchh ppalvvhvrg wprlteeqiy qefkacgrfd vrrlsknqyi llsnkykhvr
      481 lvlrdyrhhp hlqvsvyrhw rhspsvscll qisgivalws llafvlggsr sc
//
LOCUS       XP_041325906             143 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated proteins 1A/1B light chain 3C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325906
VERSION     XP_041325906.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469972.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..143
                     /product="microtubule-associated proteins 1A/1B light
                     chain 3C"
                     /calculated_mol_wt=16325
     Region          13..125
                     /region_name="Ubl_ATG8_MAP1LC3C"
                     /note="ubiquitin-like (Ubl) domain found in microtubule
                     associate protein 1 light chain 3C (MAPLC3C); cd17236"
                     /db_xref="CDD:340756"
     Site            order(13,16..17,25..26,29,36,38..39,55..61,63..64,72,76,
                     114)
                     /site_type="other"
                     /note="peptide binding site 2 [polypeptide binding]"
                     /db_xref="CDD:340756"
     Site            order(29,34..36,57..59,61..63,68,72,76,114)
                     /site_type="other"
                     /note="Atg13 interaction site [polypeptide binding]"
                     /db_xref="CDD:340756"
     Site            order(32..33,36,55..59,61,72,76)
                     /site_type="other"
                     /note="peptide binding site 1 [polypeptide binding]"
                     /db_xref="CDD:340756"
     Site            order(36,42..43,55,58,67..68,70..72,74..76,82,84..86,88,
                     91..92,96..98,123..125)
                     /site_type="other"
                     /note="Atg8-Atg7 interaction site [polypeptide binding]"
                     /db_xref="CDD:340756"
     Site            order(44,70,74,81..86,88,91..92,95..97,118,120..125)
                     /site_type="other"
                     /note="Atg4 interaction site [polypeptide binding]"
                     /db_xref="CDD:340756"
     CDS             1..143
                     /gene="MAP1LC3C"
                     /coded_by="XM_041469972.1:49..480"
                     /db_xref="GeneID:121354914"
ORIGIN      
        1 mraapgaqpd rpfklrksla trreevagir akfptkipvi veryhkekyl plldktkflv
       61 peeltmaqfi tiirsrmalt atqafyllvn nkslasmslt maevyrdykd edgfvymtya
      121 sqemfgcllp taqgktmecf qki
//
LOCUS       XP_041325907             257 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325907
VERSION     XP_041325907.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469973.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="syntaxin-7"
                     /calculated_mol_wt=29148
     Region          17..117
                     /region_name="Syntaxin_2"
                     /note="Syntaxin-like protein; pfam14523"
                     /db_xref="CDD:464199"
     Region          164..223
                     /region_name="SNARE_syntaxin7"
                     /note="SNARE motif of syntaxin 7; cd15875"
                     /db_xref="CDD:277228"
     Site            order(167..168,170..172,174..175,177..179,181..182,
                     184..189,191..193,195..196,198..200,202..203,205..210,
                     212..217,219..221)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277228"
     Site            195
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277228"
     CDS             1..257
                     /gene="STX7"
                     /coded_by="XM_041469973.1:142..915"
                     /db_xref="GeneID:121354915"
ORIGIN      
        1 msygpgfgdp nqlaqritsn iqkitqcsae iqrilhqlgt pqdtpelrqq lqqkqqytnq
       61 laketdkyik efgslpatse qrqrkiqkdr lvgefttalt nfqrlqrqaa ekekdfvarv
      121 rassrvsgga pednykegtl vswdsqpqaq vqdeeitedd lrlieeress irqleadimd
      181 ineifkdlgm miheqgdvid sieanvenad vhvqqanqql sraanyqqrs rkkmciliii
      241 laigalllgv viwllar
//
LOCUS       XP_041325908             257 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325908
VERSION     XP_041325908.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469974.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="syntaxin-7"
                     /calculated_mol_wt=29148
     Region          17..117
                     /region_name="Syntaxin_2"
                     /note="Syntaxin-like protein; pfam14523"
                     /db_xref="CDD:464199"
     Region          164..223
                     /region_name="SNARE_syntaxin7"
                     /note="SNARE motif of syntaxin 7; cd15875"
                     /db_xref="CDD:277228"
     Site            order(167..168,170..172,174..175,177..179,181..182,
                     184..189,191..193,195..196,198..200,202..203,205..210,
                     212..217,219..221)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277228"
     Site            195
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277228"
     CDS             1..257
                     /gene="STX7"
                     /coded_by="XM_041469974.1:707..1480"
                     /db_xref="GeneID:121354915"
ORIGIN      
        1 msygpgfgdp nqlaqritsn iqkitqcsae iqrilhqlgt pqdtpelrqq lqqkqqytnq
       61 laketdkyik efgslpatse qrqrkiqkdr lvgefttalt nfqrlqrqaa ekekdfvarv
      121 rassrvsgga pednykegtl vswdsqpqaq vqdeeitedd lrlieeress irqleadimd
      181 ineifkdlgm miheqgdvid sieanvenad vhvqqanqql sraanyqqrs rkkmciliii
      241 laigalllgv viwllar
//
LOCUS       XP_041325909             257 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325909
VERSION     XP_041325909.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469975.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="syntaxin-7"
                     /calculated_mol_wt=29148
     Region          17..117
                     /region_name="Syntaxin_2"
                     /note="Syntaxin-like protein; pfam14523"
                     /db_xref="CDD:464199"
     Region          164..223
                     /region_name="SNARE_syntaxin7"
                     /note="SNARE motif of syntaxin 7; cd15875"
                     /db_xref="CDD:277228"
     Site            order(167..168,170..172,174..175,177..179,181..182,
                     184..189,191..193,195..196,198..200,202..203,205..210,
                     212..217,219..221)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277228"
     Site            195
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277228"
     CDS             1..257
                     /gene="STX7"
                     /coded_by="XM_041469975.1:221..994"
                     /db_xref="GeneID:121354915"
ORIGIN      
        1 msygpgfgdp nqlaqritsn iqkitqcsae iqrilhqlgt pqdtpelrqq lqqkqqytnq
       61 laketdkyik efgslpatse qrqrkiqkdr lvgefttalt nfqrlqrqaa ekekdfvarv
      121 rassrvsgga pednykegtl vswdsqpqaq vqdeeitedd lrlieeress irqleadimd
      181 ineifkdlgm miheqgdvid sieanvenad vhvqqanqql sraanyqqrs rkkmciliii
      241 laigalllgv viwllar
//
LOCUS       XP_041325910             257 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325910
VERSION     XP_041325910.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469976.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="syntaxin-7"
                     /calculated_mol_wt=29148
     Region          17..117
                     /region_name="Syntaxin_2"
                     /note="Syntaxin-like protein; pfam14523"
                     /db_xref="CDD:464199"
     Region          164..223
                     /region_name="SNARE_syntaxin7"
                     /note="SNARE motif of syntaxin 7; cd15875"
                     /db_xref="CDD:277228"
     Site            order(167..168,170..172,174..175,177..179,181..182,
                     184..189,191..193,195..196,198..200,202..203,205..210,
                     212..217,219..221)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277228"
     Site            195
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277228"
     CDS             1..257
                     /gene="STX7"
                     /coded_by="XM_041469976.1:319..1092"
                     /db_xref="GeneID:121354915"
ORIGIN      
        1 msygpgfgdp nqlaqritsn iqkitqcsae iqrilhqlgt pqdtpelrqq lqqkqqytnq
       61 laketdkyik efgslpatse qrqrkiqkdr lvgefttalt nfqrlqrqaa ekekdfvarv
      121 rassrvsgga pednykegtl vswdsqpqaq vqdeeitedd lrlieeress irqleadimd
      181 ineifkdlgm miheqgdvid sieanvenad vhvqqanqql sraanyqqrs rkkmciliii
      241 laigalllgv viwllar
//
LOCUS       XP_041325911             257 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325911
VERSION     XP_041325911.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469977.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..257
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..257
                     /product="syntaxin-7"
                     /calculated_mol_wt=29148
     Region          17..117
                     /region_name="Syntaxin_2"
                     /note="Syntaxin-like protein; pfam14523"
                     /db_xref="CDD:464199"
     Region          164..223
                     /region_name="SNARE_syntaxin7"
                     /note="SNARE motif of syntaxin 7; cd15875"
                     /db_xref="CDD:277228"
     Site            order(167..168,170..172,174..175,177..179,181..182,
                     184..189,191..193,195..196,198..200,202..203,205..210,
                     212..217,219..221)
                     /site_type="other"
                     /note="heterotetramer interface [polypeptide binding]"
                     /db_xref="CDD:277228"
     Site            195
                     /site_type="other"
                     /note="zero layer"
                     /db_xref="CDD:277228"
     CDS             1..257
                     /gene="STX7"
                     /coded_by="XM_041469977.1:79..852"
                     /db_xref="GeneID:121354915"
ORIGIN      
        1 msygpgfgdp nqlaqritsn iqkitqcsae iqrilhqlgt pqdtpelrqq lqqkqqytnq
       61 laketdkyik efgslpatse qrqrkiqkdr lvgefttalt nfqrlqrqaa ekekdfvarv
      121 rassrvsgga pednykegtl vswdsqpqaq vqdeeitedd lrlieeress irqleadimd
      181 ineifkdlgm miheqgdvid sieanvenad vhvqqanqql sraanyqqrs rkkmciliii
      241 laigalllgv viwllar
//
LOCUS       XP_041325912             817 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: exonuclease 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325912
VERSION     XP_041325912.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469978.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..817
                     /product="LOW QUALITY PROTEIN: exonuclease 1"
                     /calculated_mol_wt=91196
     Region          1..202
                     /region_name="PIN_EXO1"
                     /note="FEN-like PIN domains of Exonuclease-1, a
                     structure-specific, divalent-metal-ion dependent, 5'
                     nuclease and homologs; cd09857"
                     /db_xref="CDD:350207"
     Site            order(2..4,7..8,30,32..33,36..37,40..41,54,58,78,85,89,92,
                     95..96,117,120..121,150,152,170..173,185)
                     /site_type="active"
                     /db_xref="CDD:350207"
     Site            order(84..109,111..127)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350207"
     Region          213..289
                     /region_name="H3TH_EXO1"
                     /note="H3TH domain of Exonuclease-1, a structure-specific,
                     divalent-metal-ion dependent, 5' nuclease; cd09908"
                     /db_xref="CDD:188628"
     Site            order(222..227,229..234,236..239)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:188628"
     Site            225
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:188628"
     CDS             1..817
                     /gene="EXO1"
                     /coded_by="XM_041469978.1:1..2454"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121354917"
ORIGIN      
        1 mgiqgllqfi keaaepshvk kykgmavavd tycwlhkgay acaeklarge ptdvyvafcm
       61 klvhmllsfg ikpilvfdgc tlpskkevek arrerrqasl lkgkqllqeg rlsearecfg
      121 rsvnithama hevikaaraq gvdcivapye adaqlaylnk igmvqaiite dsdllafgck
      181 kvflkidkfg ngleidqtrl gnckqlgnvf teekfrymci lsgcdylpsi hgiglakack
      241 llklannpdi ikvikkmgqy lkmnitvpee yiqgftrann tflyqlvfdp vsrklvplna
      301 ygddidpeal tyagrhvgdd tafqiaigni dintmeqids ynpdtaqpvq qrscgwndrr
      361 dnhvnsiwsr eykfgptedp appkmhfpek pltkgmekii svkglklagk ellskrprse
      421 caftvxlkls vdseevsdgd llkqysfskt krikkendnd gqaqksasai qsldspgisi
      481 tqessdslpr vrnkfasflq rknkekdavi vpgtrsrffc ndavmldgra kkedgdlaqd
      541 veqdcqkqqv khvaedvsrf setekssrtv fmppgemqks csqwfsslks nsgnlglpht
      601 vfsqqfhqrr nncivsqedq invavcdese desspliele qsseshgsck psecslesse
      661 ilqasnnslg vkesdssskl nddqcslsgl fsdvqtnkki tiiktkvpgl rkssnirsrm
      721 vtklkplipa kvsglsrkls pvqkrkdcdt enklglqsti gelwksfqfk rdyeklpscr
      781 ksdplspikd niqltpetee eifnrlecsh vqraifq
//
LOCUS       XP_041325913             397 aa            linear   VRT 06-MAY-2021
DEFINITION  opsin-3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325913
VERSION     XP_041325913.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469979.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..397
                     /product="opsin-3"
                     /calculated_mol_wt=44650
     Region          35..313
                     /region_name="7tmA_Encephalopsin"
                     /note="encephalopsins (opsin-3), member of the class A
                     family of seven-transmembrane G protein-coupled receptors;
                     cd15078"
                     /db_xref="CDD:320206"
     Region          36..62
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320206"
     Region          69..96
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320206"
     Region          107..137
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320206"
     Site            order(110,114..115,118..119,180..183,199..200,204,261,265,
                     288,292)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320206"
     Region          145..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320206"
     Region          192..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320206"
     Region          241..271
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320206"
     Region          281..306
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320206"
     CDS             1..397
                     /gene="OPN3"
                     /coded_by="XM_041469979.1:1..1194"
                     /db_xref="GeneID:121354918"
ORIGIN      
        1 mpagngtgts srpepaapeq evpgerplfs agtyellall vatigmlglc nnllvlvlyy
       61 kfkrlrtptn lflvnislsd llvsvfgvsl tfmsclrsrw vwdaagcvwd gfssslfgiv
      121 simtltalay eryirvvhak vidfswswra ityiwlysla wtgapllgwn rytleihglg
      181 csvdwkskdp ndtsfvllff lgclvapvgi maycyghilh avrmlrcved fqtvqvikll
      241 ryekkvakmc flmistflic wmpyavvsll itygysnlvt ptvaiipsff aksstaynpv
      301 iyifmsrkfr rcllqllcfr lmrfqrtmke tpatgsdkpi rpivmsqkag drpkkkvtfs
      361 sssvifiits ddteqiddss khnetkvnvi qvkplqg
//
LOCUS       XP_041325915             447 aa            linear   VRT 06-MAY-2021
DEFINITION  acid sphingomyelinase-like phosphodiesterase 3a [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325915
VERSION     XP_041325915.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469981.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..447
                     /product="acid sphingomyelinase-like phosphodiesterase 3a"
                     /calculated_mol_wt=51041
     Region          33..332
                     /region_name="MPP_ASMase"
                     /note="acid sphingomyelinase and related proteins,
                     metallophosphatase domain; cd00842"
                     /db_xref="CDD:277321"
     Site            order(38,40,103,144..145,248,289,291)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277321"
     Site            order(38,40,103,144,248,289,291)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277321"
     Region          304..446
                     /region_name="ASMase_C"
                     /note="Acid sphingomyelin phosphodiesterase C-terminal
                     region; pfam19272"
                     /db_xref="CDD:466022"
     CDS             1..447
                     /gene="SMPDL3A"
                     /coded_by="XM_041469981.1:242..1585"
                     /db_xref="GeneID:121354919"
ORIGIN      
        1 melrvalgla llcsaleaap agpqrprsav gqfwhvsdlh ldptyhitpd rtkvcssskg
       61 vnasnpgpfg dflcdspyql ilsafafmnd skeqvsfmiw tgdspphvpv kelstklvis
      121 iignlsstir nffpdlqvfp algnhdywpq dqlpvttsev ynavadfwkp wlsdeaintf
      181 rrggfytqlf essnshqplr iislntnlyy spnkatvnit dpanqfawle eileissqkk
      241 ekvyiighvp vgylpyarnt taireyyner lvkifrkyss viagqffght hrdsimilld
      301 eeekpvnslf vapavtpvks vlqtesnnpg vrlyqydlfd yslldlwqfy ldlrdankkn
      361 esnwkleyil tktygiedlk peslyemvkq lsmphstlfe qyysnyivsy dktilcedgc
      421 ktcqicaiqy ldyssytdci nqeaiwr
//
LOCUS       XP_041325916            1691 aa            linear   VRT 06-MAY-2021
DEFINITION  formin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325916
VERSION     XP_041325916.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469982.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1691
                     /product="formin-2"
                     /calculated_mol_wt=182982
     Region          641..711
                     /region_name="DEP"
                     /note="DEP domain, named after Dishevelled, Egl-10, and
                     Pleckstrin, where this domain was first discovered. The
                     function of this domain is still not clear, but it is
                     believed to be important for the membrane association of
                     the signaling proteins in which it is...; cl02442"
                     /db_xref="CDD:470580"
     Region          <744..>862
                     /region_name="PRK02224"
                     /note="DNA double-strand break repair Rad50 ATPase"
                     /db_xref="CDD:179385"
     Region          1252..1642
                     /region_name="FH2"
                     /note="Formin Homology 2 Domain; pfam02181"
                     /db_xref="CDD:396655"
     CDS             1..1691
                     /gene="FMN2"
                     /coded_by="XM_041469982.1:42..5117"
                     /db_xref="GeneID:121354920"
ORIGIN      
        1 mqaiktveke vtfiketlft esflkqqecs rtparrqlqe qqplegavcs sqcctehvpa
       61 epsasstlck kaapadgrea qrafaslasp ppankpgsle gispagqrne iredgliakg
      121 valqkimgnq dgklkkntgd vqeggedasg pkdtdgtkkv sggrrglgkh akgsesgkkk
      181 gksdsrpsvf snlrirknls kakdgnsssr edvlesqalq pgeldsthsi vtktpdisis
      241 adegglsdtd vehfeirnet vpaaaetqdg qrtssgsdtd iysfhsaaeq edllsdiqqa
      301 irlqqqqqqg ainigtedav tktmgrhman sqatpldfer ffsvtttdke rspdtegafp
      361 avseivesvp vscaaerepk eavngtdspg nslfetqerq llieeqplag vdavaselqd
      421 glnraageng sqthsstepf pspvadaeak iaevqavdfq gsvtesgisd agrdhaaetq
      481 egkhtlsasq eelrngsste mkngslsseg tadspmlgsr cfkpylinpc yiktttrqls
      541 spnhspspsp sqsplftrrq dsfhkkekvs irkkrsasla glfsrsadwt eevsnhksei
      601 sekvssadyl ehkgfrekfq aervplthsr kssgvqaste tfpnvfsgrt lleklfsqqe
      661 napqeeaekl csriiamgll lpftdcfrep cnqsakqstp tfdqdqlytw aavsqpthst
      721 dyiegsfprr ipsawpppkp pdeeqrlkis eeelkstvle tekqciggvq qaqdafevks
      781 eerasviqql eqtiedlrtk iaelekqfpa aevqtagreq enehahadsg elssvtlqrn
      841 eeettprtvs qarsvqtspt edylthtmps asalpqpapp phleggkseg ptqklpalel
      901 qptfcseisl ilspklvsvp ldasqsvpsi pqsplpgpkv dlslafeget emtvshqpls
      961 tvdvtcseha pslppeptcs ipptlpvteq aaslsgahgh sfvtpmsvag lplpppppgs
     1021 glpssavsav tgldhsfpga tmsplpppph lpsgeiptlp papllpcpgf pppppppplp
     1081 gagvssplpa wgippppppa pplpgagvpp pppplpglgl tppapllpga glpppppplp
     1141 gggipppppp ppplpgsavp pppppppplp gvavpppppp pplpgvavpp pppplpglgm
     1201 pppappplpg sapplaasvq gssypavpqg flppplpsgl famgmnqekg srkhviepsr
     1261 pmkplywtri qlhskrdssa slvwekieep sidyhefeel fsktavkerk kpisdtitkt
     1321 ktkqvvklls nkrsqavgil msslhldmkd iqhavvnldn svvdletlqa lyenraqsde
     1381 lekiekhska skekenaksl dkpeqflyel slipnfserv fcilfqstfs esigsirrkl
     1441 ellqklcetl knesgvmrvl glvlafgnym nggnrtrgqa dgfgldilpk lkdvkssdns
     1501 rsllsyivsy ylrnfdedag reqcifplpd pqdlfqasql kfddfqkdlr kmkkdlrace
     1561 teaakvyqls leehlqpfkd nmeqfisqak idqeneeksl teahksflet tayfcmkpkm
     1621 gekevsphsf fsiwhefssd fkdfwkkenk lilqervkea eevcrqkkgk slynirpkhd
     1681 sgikakismk i
//
LOCUS       XP_041325917             581 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325917
VERSION     XP_041325917.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469983.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..581
                     /product="heat shock factor protein 2 isoform X1"
                     /calculated_mol_wt=64704
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..546
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..581
                     /gene="HSF2"
                     /coded_by="XM_041469983.1:641..2386"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpgndp asnvsdstsp
      361 lmssavqlnn qstltaedpv svmdsilnen gvisqninll gkvelldyld sidcsledfq
      421 amlsgrqfsi dpdllvdlft ssvqmnptdh dhitntkvet kgketnknna gpaasqetqg
      481 tkprsdkqli hytafpllaf ldgnpgsale sggftaetac tvekslegde llessldpqp
      541 tqsklvrlep lteaeaseat lfylcelapa pmdtdmafld n
//
LOCUS       XP_041325918             575 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325918
VERSION     XP_041325918.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469984.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="heat shock factor protein 2 isoform X2"
                     /calculated_mol_wt=64077
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..540
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..575
                     /gene="HSF2"
                     /coded_by="XM_041469984.1:645..2372"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpgndp asnvsdstsp
      361 lmssavqlnn qstltaedpv svmdsilnen gvisqninll gkvelldyld sidcsledfq
      421 amlsgrqfsi dpdllvdlft ssvqmnptdh dhitntkvet kgketnknna gpaasqetqd
      481 kqlihytafp llafldgnpg salesggfta etactveksl egdellessl dpqptqsklv
      541 rleplteaea seatlfylce lapapmdtdm afldn
//
LOCUS       XP_041325919             561 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325919
VERSION     XP_041325919.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469985.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..561
                     /product="heat shock factor protein 2 isoform X3"
                     /calculated_mol_wt=62435
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..526
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..561
                     /gene="HSF2"
                     /coded_by="XM_041469985.1:645..2330"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpgndp asnvsdstsp
      361 lmssavqlnn qstltaedpv svmdsilnen gvisqninll gkvelldyld sidcsledfq
      421 amlsgrqfsi dpdllvdvet kgketnknna gpaasqetqg tkprsdkqli hytafpllaf
      481 ldgnpgsale sggftaetac tvekslegde llessldpqp tqsklvrlep lteaeaseat
      541 lfylcelapa pmdtdmafld n
//
LOCUS       XP_041325920             555 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325920
VERSION     XP_041325920.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469986.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..555
                     /product="heat shock factor protein 2 isoform X4"
                     /calculated_mol_wt=61809
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..520
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..555
                     /gene="HSF2"
                     /coded_by="XM_041469986.1:648..2315"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpgndp asnvsdstsp
      361 lmssavqlnn qstltaedpv svmdsilnen gvisqninll gkvelldyld sidcsledfq
      421 amlsgrqfsi dpdllvdvet kgketnknna gpaasqetqd kqlihytafp llafldgnpg
      481 salesggfta etactveksl egdellessl dpqptqsklv rleplteaea seatlfylce
      541 lapapmdtdm afldn
//
LOCUS       XP_041325921             551 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325921
VERSION     XP_041325921.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469987.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="heat shock factor protein 2 isoform X5"
                     /calculated_mol_wt=61715
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..516
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..551
                     /gene="HSF2"
                     /coded_by="XM_041469987.1:648..2303"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpedpv svmdsilnen
      361 gvisqninll gkvelldyld sidcsledfq amlsgrqfsi dpdllvdlft ssvqmnptdh
      421 dhitntkvet kgketnknna gpaasqetqg tkprsdkqli hytafpllaf ldgnpgsale
      481 sggftaetac tvekslegde llessldpqp tqsklvrlep lteaeaseat lfylcelapa
      541 pmdtdmafld n
//
LOCUS       XP_041325922             498 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041325922
VERSION     XP_041325922.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469988.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="heat shock factor protein 2 isoform X6"
                     /calculated_mol_wt=55325
     Region          <1..>176
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          <1..53
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          173..463
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..498
                     /gene="HSF2"
                     /coded_by="XM_041469988.1:362..1858"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 masfvrqlnm ygfrkvvhvd sgivkmerdg pvefrhayfr qgredllehi krkvsssrpe
       61 enkirqedls kiicsaqkvq ikqttiesql sllkrenesl wrevselrak hlqqqqvirk
      121 ivqfivtlvq nnqlvslkrk rplllntngp tksnvfqkiv kepadsshhv plnrneglkq
      181 reqisddivi ydvtedvgee ehpmadeenl pvtpetiedt tsdssncscs yhspdivive
      241 ddnedeyapv iqgdkntesv avpgndpasn vsdstsplms savqlnnqst ltaedpvsvm
      301 dsilnengvi sqninllgkv elldyldsid csledfqaml sgrqfsidpd llvdlftssv
      361 qmnptdhdhi tntkvetkgk etnknnagpa asqetqgtkp rsdkqlihyt afpllafldg
      421 npgsalesgg ftaetactve kslegdelle ssldpqptqs klvrleplte aeaseatlfy
      481 lcelapapmd tdmafldn
//
LOCUS       XP_041325924             433 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325924
VERSION     XP_041325924.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469990.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..433
                     /product="heat shock factor protein 2 isoform X7"
                     /calculated_mol_wt=49057
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..>402
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..433
                     /gene="HSF2"
                     /coded_by="XM_041469990.1:661..1962"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpgndp asnvsdstsp
      361 lmssavqlnn qstltaedpv svmdsilnen gvisqninll gkwrqrekkl trimlvqqph
      421 rkrkvlspdq iss
//
LOCUS       XP_041325925             427 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325925
VERSION     XP_041325925.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469991.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..427
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..427
                     /product="heat shock factor protein 2 isoform X8"
                     /calculated_mol_wt=48417
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..>402
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..427
                     /gene="HSF2"
                     /coded_by="XM_041469991.1:666..1949"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpgndp asnvsdstsp
      361 lmssavqlnn qstltaedpv svmdsilnen gvisqninll gkwrqrekkl trimlvqqph
      421 rkrkiss
//
LOCUS       XP_041325926             409 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041325926
VERSION     XP_041325926.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469992.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="heat shock factor protein 2 isoform X9"
                     /calculated_mol_wt=46077
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..>402
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..409
                     /gene="HSF2"
                     /coded_by="XM_041469992.1:660..1889"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpgndp asnvsdstsp
      361 lmssavqlnn qstltaedpv svmdsilnen gvisqninll gnflqvlcr
//
LOCUS       XP_041325927             403 aa            linear   VRT 06-MAY-2021
DEFINITION  heat shock factor protein 2 isoform X10 [Pyrgilauda ruficollis].
ACCESSION   XP_041325927
VERSION     XP_041325927.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469993.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="heat shock factor protein 2 isoform X10"
                     /calculated_mol_wt=46067
     Region          28..>259
                     /region_name="HSF1"
                     /note="Heat shock transcription factor [Transcription];
                     COG5169"
                     /db_xref="CDD:227497"
     Region          36..136
                     /region_name="HSF_DNA-bind"
                     /note="HSF-type DNA-binding; pfam00447"
                     /db_xref="CDD:459813"
     Region          256..>372
                     /region_name="Vert_HS_TF"
                     /note="Vertebrate heat shock transcription factor;
                     pfam06546"
                     /db_xref="CDD:461944"
     CDS             1..403
                     /gene="HSF2"
                     /coded_by="XM_041469993.1:672..1883"
                     /db_xref="GeneID:121354921"
ORIGIN      
        1 mkqqqqqqpq qpppppppqp pqqpsppfas pgvpaflskl wallgetpsn qlitwsqngk
       61 sflvldeqrf akeilpkyfk hnnmasfvrq lnmygfrkvv hvdsgivkme rdgpvefrha
      121 yfrqgredll ehikrkvsss rpeenkirqe dlskiicsaq kvqikqttie sqlsllkren
      181 eslwrevsel rakhlqqqqv irkivqfivt lvqnnqlvsl krkrplllnt ngptksnvfq
      241 kivkepadss hhvplnrneg lkqreqisdd iviydvtedv geeehpmade enlpvtpeti
      301 edttsdssnc scsyhspdiv iveddnedey apviqgdknt esvavpedpv svmdsilnen
      361 gvisqninll gkwrqrekkl trimlvqqph rkrkvlspdq iss
//
LOCUS       XP_041325928             461 aa            linear   VRT 06-MAY-2021
DEFINITION  serine incorporator 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325928
VERSION     XP_041325928.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469994.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="serine incorporator 1"
                     /calculated_mol_wt=51159
     Region          15..458
                     /region_name="Serinc"
                     /note="Serine incorporator (Serinc); pfam03348"
                     /db_xref="CDD:460891"
     CDS             1..461
                     /gene="SERINC1"
                     /coded_by="XM_041469994.1:115..1500"
                     /db_xref="GeneID:121354922"
ORIGIN      
        1 mgsvlglcsm aswipclcgs apcllcrccp sgnnstitrl iyafflllgv svacvmlipg
       61 meeqlkkipg fcdgglgtsi pgvqghvncd vlvgykavyr vcfgmamffl lfsllmikvk
      121 ssndpraavh ngfwffkfat alaisvgaff ipegpfttvw fyvgmagafc filiqlvlli
      181 dfahswnesw vekmeegnsr cwyaallsat avnyllslva ivlfyvyyth pegcsenktf
      241 isvnmllcig asvmsilpri qesqprsgll qssvitiytm yltwsamtne pdrrcnpsll
      301 siigynstti ptqgqvvqww daqgivglvl fllcvlyssi rtsnnsqvnk lmltsdestl
      361 iedgmprsdg slddgddvhr aidnerdgvt ysysffhfml flaslyimmt ltnwyspdss
      421 yetmtskwps vwvkissswi givlyvwtlv aplvltnrdf d
//
LOCUS       XP_041325929             408 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325929
VERSION     XP_041325929.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469995.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="F-box only protein 5"
                     /calculated_mol_wt=46091
     Region          216..264
                     /region_name="F-box_FBXO5"
                     /note="F-box domain found in F-box only protein 5 (FBXO5)
                     and similar proteins; cd22170"
                     /db_xref="CDD:438941"
     Site            order(218,226,229..230,233..234,238,240..241,245..247,249)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438941"
     Region          330..385
                     /region_name="BRcat_RBR_FBXO5"
                     /note="BRcat domain found in F-box only protein 5 (FBXO5);
                     cd20364"
                     /db_xref="CDD:439025"
     CDS             1..408
                     /gene="FBXO5"
                     /coded_by="XM_041469995.1:10..1236"
                     /db_xref="GeneID:121354923"
ORIGIN      
        1 mksnlnrsck mkrdfdcasl ragfaplkca lektrleksc plnyeegfck scaeehqkil
       61 lsdsyhaatr nldledgerp ihnkensqvt qrldegicem eamessklne dsgyssmlst
      121 hyadaiehed slplagnlcg tpkhclmknq kqeqfskktl lpvihyeevi cstlkksgkr
      181 nlkswaavdr ivsrgkfelc nligkkmgld ridilaelfq kdlkhvlani lrhlsemdlv
      241 nfakvsttwq kilqedkwif qmysravknl snvtkapeha atreyvlyrv slasiqkatp
      301 pkhlnkkstr skasrnhsrl tefseaarnl knteslkach rcgspakyds ylqratcnre
      361 scgfdfctkc mcsyhsssdc vsskpvkhns apgplpgtkk skqnlkrl
//
LOCUS       XP_041325930             471 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 181 [Pyrgilauda ruficollis].
ACCESSION   XP_041325930
VERSION     XP_041325930.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469996.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="transmembrane protein 181"
                     /calculated_mol_wt=54585
     Region          121..419
                     /region_name="MIG-14_Wnt-bd"
                     /note="Wnt-binding factor required for Wnt secretion;
                     pfam06664"
                     /db_xref="CDD:461980"
     CDS             1..471
                     /gene="TMEM181"
                     /coded_by="XM_041469996.1:139..1554"
                     /db_xref="GeneID:121354924"
ORIGIN      
        1 mrlytlskrh fvlvfvvffi cfgltvfigi agpnvietsv artdlnnslk lkpfnlsspp
       61 lstynqqlwl tcvveldqhd vslkknvtmt vrvlgvvkdg stpyvnnqvh nrtrllscaq
      121 kcseiivahl gylnytqyni fvsfedlnkl tytiqnitft wktynptfsq veiwfrfvfv
      181 vltfmvtclf ahslrkfsmr dwgieqkwms illpllllyn dpffplsflv nswfpgmldd
      241 lfqslflcal llfwlcvyhg irvqgerkcl tfylpkffiv gllwlasvtl giwqtvnevh
      301 dptyqyrvdt gnfqgmkiff lvvattyily llflivracs elrnmpyvdl rlkfltaltf
      361 vvlvisivil ylrfgaqvlq dnfvaelsth yqnsaeflsf ygllnfylyt lafvyspskn
      421 alyesqlkdn pafsmlndsd ddviygsdye emplqngqai rakykeesds d
//
LOCUS       XP_041325931             495 aa            linear   VRT 06-MAY-2021
DEFINITION  regulator of G-protein signaling 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041325931
VERSION     XP_041325931.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469997.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="regulator of G-protein signaling 7"
                     /calculated_mol_wt=57589
     Region          29..116
                     /region_name="DEP_RGS7-like"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in RGS (regulator of G-protein signaling) proteins
                     of the subfamily R7. This subgroup contains RGS7, RGS6,
                     RGS9 and RGS11. They share a common domain architecture,
                     containing, beside the RGS domain; cd04450"
                     /db_xref="CDD:239897"
     Region          113..214
                     /region_name="RGS_DHEX"
                     /note="Regulator of G-protein signalling DHEX domain;
                     pfam18148"
                     /db_xref="CDD:375589"
     Region          256..316
                     /region_name="GGL"
                     /note="G protein gamma subunit-like motifs; smart00224"
                     /db_xref="CDD:128520"
     Site            order(258,262,265,269,274,276,279..280,283..284,287,
                     296..297,306)
                     /site_type="other"
                     /note="beta subunit binding site [polypeptide binding]"
                     /db_xref="CDD:238024"
     Region          326..446
                     /region_name="RGS_RGS7"
                     /note="Regulator of G protein signaling (RGS) domain found
                     in the RGS7 protein; cd08738"
                     /db_xref="CDD:188692"
     Site            order(339,370..374,415..417,420,427,431)
                     /site_type="other"
                     /note="G-beta-5 interaction site"
                     /db_xref="CDD:188692"
     Site            order(354..356,358..359,392..394,396..398,400..402,425,
                     428..429,431..433,437)
                     /site_type="other"
                     /note="G-alpha interaction site"
                     /db_xref="CDD:188692"
     CDS             1..495
                     /gene="RGS7"
                     /coded_by="XM_041469997.1:240..1727"
                     /db_xref="GeneID:121354925"
ORIGIN      
        1 maqgnnygqs ssgvadespn mlvyrkmedv iarmqdekng ipirtvksfl skipsvfsgs
       61 divqwltknl siedpvealh lgtlmaahgy ffpisdhvlt lkddgtfyrf qtpyfwpsnc
      121 wepentdyav ylckrtmqnk arleladyea eslarlqraf arkwefifmq aeaqakvdkk
      181 rdkierkild sqerafwdvh rpvpgcvntt evdikkssrm rnphktrksv yglqndirsh
      241 spthtpvpet kpptedelhq eikhwqmqld rhrlkmskva esllayteqy leydpflvpp
      301 dpsnpwisdd ttfweleask epgqqrvkrw gfgmdealkd pvgreqflkf lesefssenl
      361 rfwlavedlk krpirevpar vqeiwqefla pgapsainld sksydkttqn vkepgrytfe
      421 daqehiyklm ksdsyprfir ssayqellqa kkklentldr rtsfekftrn vgrnipifpc
      481 hknctptlra stnll
//
LOCUS       XP_041325933             417 aa            linear   VRT 06-MAY-2021
DEFINITION  GPI mannosyltransferase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325933
VERSION     XP_041325933.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041469999.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="GPI mannosyltransferase 1"
                     /calculated_mol_wt=47082
     Region          19..404
                     /region_name="PMT_2"
                     /note="Dolichyl-phosphate-mannose-protein
                     mannosyltransferase; cl21590"
                     /db_xref="CDD:473917"
     CDS             1..417
                     /gene="PIGM"
                     /coded_by="XM_041469999.1:82..1335"
                     /db_xref="GeneID:121354926"
ORIGIN      
        1 magmgaalla gllarlalvl yglhqdrtmr vrytdvdyrv ftdaarlvte grspyrraty
       61 rytpllawll tpnvflteaf gkllfvagdl aaavvayral rrrgtaagra cgccaaawll
      121 nplpmavssr gnaealvall vlatlywvea gsvgkaavcy glavhmkiyp ltyalpialr
      181 lrtaprrger aldargdkta kvtfvarlwh lfvktlnrdv llfgtvagsv laaltvafyh
      241 lygwefleha ylyhltrrdi rhnfspyfym lyltaeskws falglaaflp qlllllvvsi
      301 afyrdlafsc flhttifvtf nkvctsqyfv wylclfplvv psikmswrrg vlllflwfig
      361 qglwltpaff lefkgyntyl fiwlagllfl linsliivqi mahyqkeaqv akklkqr
//
LOCUS       XP_041325934             388 aa            linear   VRT 06-MAY-2021
DEFINITION  neuromedin-B receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041325934
VERSION     XP_041325934.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470000.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="neuromedin-B receptor"
                     /calculated_mol_wt=43200
     Region          42..333
                     /region_name="7tmA_NMBR"
                     /note="neuromedin B receptor, member of the class A family
                     of seven-transmembrane G protein-coupled receptors;
                     cd15125"
                     /db_xref="CDD:320253"
     Region          43..69
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320253"
     Region          76..102
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320253"
     Site            order(98,101..102,114..119,121..122,125,170,172..176,207,
                     210..212,214..216,218..219,277,280..281,283..284,287,
                     300..301,303..305,308,311..312)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320253"
     Region          114..144
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320253"
     Region          156..176
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320253"
     Region          207..232
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320253"
     Region          257..287
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320253"
     Region          301..326
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320253"
     CDS             1..388
                     /gene="NMBR"
                     /coded_by="XM_041470000.1:3..1169"
                     /db_xref="GeneID:121354927"
ORIGIN      
        1 mepepppelt amplgengsv rlvpdtapls pgrgtavfvi rcvipslyll iitvgllgni
       61 tlmkifisns amrsvpnifi sslaagdlll lvtcvpvdas ryfseewlfg evgcklipvi
      121 qltsvgvsvf tltalsadry kaivnpmdiq tsgavlwtcl kataiwvism llavpeavfs
      181 elahindtdn atftacipyp mtddvhpkih svllflvyfl vplviisiyy yhiaksliks
      241 ahnipgehse hskrqmetrk rlakivlvfv gffaicwfpn hvlymyrsfh ynkidpsmgh
      301 mvvtlvarvl sfcnscvnpf alyflsesfr rhfnnqlrcr kkaqkersas ylcnssaiqm
      361 tslksntrnt vttmtqlngh nlkqemsl
//
LOCUS       XP_041325935             775 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein PLAGL1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325935
VERSION     XP_041325935.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470001.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..775
                     /product="zinc finger protein PLAGL1 isoform X1"
                     /calculated_mol_wt=86537
     Region          36..167
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(59..60,117..122,133..135,156..159)
                     /site_type="active"
                     /db_xref="CDD:380971"
     Site            order(59..60,118..122,158)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380971"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(312,314,316,318..319,322..323,326,342,344,348..349,
                     352..353,356,370,372,374,376..377,380..381,384)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <328..410
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          335..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          365..385
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <381..>507
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          394..414
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          423..443
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(428,430,432,434..435,438..439,442,463,465,469..470,
                     473..474,477,491,493,495,497..498,501..502,506)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          458..478
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          486..507
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..775
                     /gene="PLAGL1"
                     /coded_by="XM_041470001.1:276..2603"
                     /db_xref="GeneID:121354928"
ORIGIN      
        1 mstdllwced cgksligeck lhgplirakd rvipsrarlt lphyltlrvl elragnqqil
       61 gvfakkviqk rtqfgpyvgq lstkltcyde srlvlqvlkd ggkyfldtpn edcgnwmmfv
      121 rlarnqeeqt lvayqhcgev yfttvkpiep htelkvwyaa dyakfmeasa vfikeesdvs
      181 plppvakepv dpwicsscgg tfatfalles hqcihkdrvl ptrfrppnkl gpvkaknklk
      241 gklrgaslgk sitqcfgtis cssaakfsca ssgstcgalv rfipkwrngr ssllkgkevk
      301 qpdsypcrlc gkifdsidkl tvhtyahkge rpykcsqhgc tkafiskykl lrhsathspq
      361 kshqcgycek tfhrkdhlkn hlqthdpnkm afkceecgkk yntklgykrh lalhaatsgd
      421 ltcrvcaqef ggtevllehl kshagkptgn mkekkhkcdh cerhfytrkd vrrhmvvhtg
      481 ckdflcqfca qrfgrkdhlt rhtrkthpqe llksrlqngd svglldqlfs yrlkedasml
      541 splpervpvp ngivnsseae eyncshlhsq sslqpalple sshlqrmgca dslpavpptp
      601 csaavplnln lhqpnkydls stsfaagslk nlpikvdvkg ynvhlledlp lpepqslhki
      661 nmeeassgpv gdtnkypvhk eteaaaetas lpfmdlthvm gfwqlppcdn qntigditma
      721 fgseepshrl nglgqqqglq laaggmainq lhqfprsfps ttnsvtlphf hhafk
//
LOCUS       XP_041325936             775 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein PLAGL1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325936
VERSION     XP_041325936.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470002.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..775
                     /product="zinc finger protein PLAGL1 isoform X1"
                     /calculated_mol_wt=86537
     Region          36..167
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(59..60,117..122,133..135,156..159)
                     /site_type="active"
                     /db_xref="CDD:380971"
     Site            order(59..60,118..122,158)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380971"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(312,314,316,318..319,322..323,326,342,344,348..349,
                     352..353,356,370,372,374,376..377,380..381,384)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <328..410
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          335..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          365..385
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <381..>507
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          394..414
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          423..443
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(428,430,432,434..435,438..439,442,463,465,469..470,
                     473..474,477,491,493,495,497..498,501..502,506)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          458..478
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          486..507
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..775
                     /gene="PLAGL1"
                     /coded_by="XM_041470002.1:69..2396"
                     /db_xref="GeneID:121354928"
ORIGIN      
        1 mstdllwced cgksligeck lhgplirakd rvipsrarlt lphyltlrvl elragnqqil
       61 gvfakkviqk rtqfgpyvgq lstkltcyde srlvlqvlkd ggkyfldtpn edcgnwmmfv
      121 rlarnqeeqt lvayqhcgev yfttvkpiep htelkvwyaa dyakfmeasa vfikeesdvs
      181 plppvakepv dpwicsscgg tfatfalles hqcihkdrvl ptrfrppnkl gpvkaknklk
      241 gklrgaslgk sitqcfgtis cssaakfsca ssgstcgalv rfipkwrngr ssllkgkevk
      301 qpdsypcrlc gkifdsidkl tvhtyahkge rpykcsqhgc tkafiskykl lrhsathspq
      361 kshqcgycek tfhrkdhlkn hlqthdpnkm afkceecgkk yntklgykrh lalhaatsgd
      421 ltcrvcaqef ggtevllehl kshagkptgn mkekkhkcdh cerhfytrkd vrrhmvvhtg
      481 ckdflcqfca qrfgrkdhlt rhtrkthpqe llksrlqngd svglldqlfs yrlkedasml
      541 splpervpvp ngivnsseae eyncshlhsq sslqpalple sshlqrmgca dslpavpptp
      601 csaavplnln lhqpnkydls stsfaagslk nlpikvdvkg ynvhlledlp lpepqslhki
      661 nmeeassgpv gdtnkypvhk eteaaaetas lpfmdlthvm gfwqlppcdn qntigditma
      721 fgseepshrl nglgqqqglq laaggmainq lhqfprsfps ttnsvtlphf hhafk
//
LOCUS       XP_041325937             775 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein PLAGL1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325937
VERSION     XP_041325937.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470003.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..775
                     /product="zinc finger protein PLAGL1 isoform X1"
                     /calculated_mol_wt=86537
     Region          36..167
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(59..60,117..122,133..135,156..159)
                     /site_type="active"
                     /db_xref="CDD:380971"
     Site            order(59..60,118..122,158)
                     /site_type="other"
                     /note="SAM binding site [polypeptide binding]"
                     /db_xref="CDD:380971"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(312,314,316,318..319,322..323,326,342,344,348..349,
                     352..353,356,370,372,374,376..377,380..381,384)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <328..410
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          335..357
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          365..385
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <381..>507
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          394..414
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          423..443
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(428,430,432,434..435,438..439,442,463,465,469..470,
                     473..474,477,491,493,495,497..498,501..502,506)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          458..478
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          486..507
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..775
                     /gene="PLAGL1"
                     /coded_by="XM_041470003.1:46..2373"
                     /db_xref="GeneID:121354928"
ORIGIN      
        1 mstdllwced cgksligeck lhgplirakd rvipsrarlt lphyltlrvl elragnqqil
       61 gvfakkviqk rtqfgpyvgq lstkltcyde srlvlqvlkd ggkyfldtpn edcgnwmmfv
      121 rlarnqeeqt lvayqhcgev yfttvkpiep htelkvwyaa dyakfmeasa vfikeesdvs
      181 plppvakepv dpwicsscgg tfatfalles hqcihkdrvl ptrfrppnkl gpvkaknklk
      241 gklrgaslgk sitqcfgtis cssaakfsca ssgstcgalv rfipkwrngr ssllkgkevk
      301 qpdsypcrlc gkifdsidkl tvhtyahkge rpykcsqhgc tkafiskykl lrhsathspq
      361 kshqcgycek tfhrkdhlkn hlqthdpnkm afkceecgkk yntklgykrh lalhaatsgd
      421 ltcrvcaqef ggtevllehl kshagkptgn mkekkhkcdh cerhfytrkd vrrhmvvhtg
      481 ckdflcqfca qrfgrkdhlt rhtrkthpqe llksrlqngd svglldqlfs yrlkedasml
      541 splpervpvp ngivnsseae eyncshlhsq sslqpalple sshlqrmgca dslpavpptp
      601 csaavplnln lhqpnkydls stsfaagslk nlpikvdvkg ynvhlledlp lpepqslhki
      661 nmeeassgpv gdtnkypvhk eteaaaetas lpfmdlthvm gfwqlppcdn qntigditma
      721 fgseepshrl nglgqqqglq laaggmainq lhqfprsfps ttnsvtlphf hhafk
//
LOCUS       XP_041325938             659 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein PLAGL1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325938
VERSION     XP_041325938.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470004.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..659
                     /product="zinc finger protein PLAGL1 isoform X2"
                     /calculated_mol_wt=73403
     Region          <1..51
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1..6,17..19,40..43)
                     /site_type="active"
                     /db_xref="CDD:380971"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(196,198,200,202..203,206..207,210,226,228,232..233,
                     236..237,240,254,256,258,260..261,264..265,268)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <212..294
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          219..241
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          249..269
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <265..>391
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          278..298
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(312,314,316,318..319,322..323,326,347,349,353..354,
                     357..358,361,375,377,379,381..382,385..386,390)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          342..362
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          370..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..659
                     /gene="PLAGL1"
                     /coded_by="XM_041470004.1:522..2501"
                     /db_xref="GeneID:121354928"
ORIGIN      
        1 mmfvrlarnq eeqtlvayqh cgevyfttvk piephtelkv wyaadyakfm easavfikee
       61 sdvsplppva kepvdpwics scggtfatfa lleshqcihk drvlptrfrp pnklgpvkak
      121 nklkgklrga slgksitqcf gtiscssaak fscassgstc galvrfipkw rngrssllkg
      181 kevkqpdsyp crlcgkifds idkltvhtya hkgerpykcs qhgctkafis kykllrhsat
      241 hspqkshqcg ycektfhrkd hlknhlqthd pnkmafkcee cgkkyntklg ykrhlalhaa
      301 tsgdltcrvc aqefggtevl lehlkshagk ptgnmkekkh kcdhcerhfy trkdvrrhmv
      361 vhtgckdflc qfcaqrfgrk dhltrhtrkt hpqellksrl qngdsvglld qlfsyrlked
      421 asmlsplper vpvpngivns seaeeyncsh lhsqsslqpa lplesshlqr mgcadslpav
      481 pptpcsaavp lnlnlhqpnk ydlsstsfaa gslknlpikv dvkgynvhll edlplpepqs
      541 lhkinmeeas sgpvgdtnky pvhketeaaa etaslpfmdl thvmgfwqlp pcdnqntigd
      601 itmafgseep shrlnglgqq qglqlaaggm ainqlhqfpr sfpsttnsvt lphfhhafk
//
LOCUS       XP_041325939             659 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein PLAGL1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325939
VERSION     XP_041325939.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470005.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..659
                     /product="zinc finger protein PLAGL1 isoform X2"
                     /calculated_mol_wt=73403
     Region          <1..51
                     /region_name="SET"
                     /note="SET (Su(var)3-9, Enhancer-of-zeste, Trithorax)
                     domain superfamily; cl40432"
                     /db_xref="CDD:394802"
     Site            order(1..6,17..19,40..43)
                     /site_type="active"
                     /db_xref="CDD:380971"
     Region          191..211
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(196,198,200,202..203,206..207,210,226,228,232..233,
                     236..237,240,254,256,258,260..261,264..265,268)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          <212..294
                     /region_name="SFP1"
                     /note="Putative transcriptional repressor regulating G2/M
                     transition [Transcription / Cell division and chromosome
                     partitioning]; COG5189"
                     /db_xref="CDD:227516"
     Region          219..241
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          249..269
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <265..>391
                     /region_name="COG5236"
                     /note="Uncharacterized conserved protein, contains RING
                     Zn-finger [General function prediction only]"
                     /db_xref="CDD:227561"
     Region          278..298
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          307..327
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(312,314,316,318..319,322..323,326,347,349,353..354,
                     357..358,361,375,377,379,381..382,385..386,390)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          342..362
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          370..391
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..659
                     /gene="PLAGL1"
                     /coded_by="XM_041470005.1:465..2444"
                     /db_xref="GeneID:121354928"
ORIGIN      
        1 mmfvrlarnq eeqtlvayqh cgevyfttvk piephtelkv wyaadyakfm easavfikee
       61 sdvsplppva kepvdpwics scggtfatfa lleshqcihk drvlptrfrp pnklgpvkak
      121 nklkgklrga slgksitqcf gtiscssaak fscassgstc galvrfipkw rngrssllkg
      181 kevkqpdsyp crlcgkifds idkltvhtya hkgerpykcs qhgctkafis kykllrhsat
      241 hspqkshqcg ycektfhrkd hlknhlqthd pnkmafkcee cgkkyntklg ykrhlalhaa
      301 tsgdltcrvc aqefggtevl lehlkshagk ptgnmkekkh kcdhcerhfy trkdvrrhmv
      361 vhtgckdflc qfcaqrfgrk dhltrhtrkt hpqellksrl qngdsvglld qlfsyrlked
      421 asmlsplper vpvpngivns seaeeyncsh lhsqsslqpa lplesshlqr mgcadslpav
      481 pptpcsaavp lnlnlhqpnk ydlsstsfaa gslknlpikv dvkgynvhll edlplpepqs
      541 lhkinmeeas sgpvgdtnky pvhketeaaa etaslpfmdl thvmgfwqlp pcdnqntigd
      601 itmafgseep shrlnglgqq qglqlaaggm ainqlhqfpr sfpsttnsvt lphfhhafk
//
LOCUS       XP_041325940             295 aa            linear   VRT 06-MAY-2021
DEFINITION  basic proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325940
VERSION     XP_041325940.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470006.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=30369
     CDS             1..295
                     /gene="LOC121354929"
                     /coded_by="XM_041470006.1:1..888"
                     /db_xref="GeneID:121354929"
ORIGIN      
        1 mgvgsgrrcg pdaappapga vapaaspkpr pgaggrsaga psrrpplppp pklartsvpi
       61 sccymhrlrr rggrdgrvrg gplphpgrts gesaqlnrkp asyslplpap papcprrrqn
      121 thsrvcalth tagtpgpapg spprpargag ggdrrrpppp haarsgagat entnsllrag
      181 rglrtrgpta hstgisrqpp plaasdqktl frtplrcalp prsphfspsf slceqragaa
      241 egglgwqrap slrsapsppg ahthtrappp sppaarprhp hhivpnstav prkch
//
LOCUS       XP_041325941             528 aa            linear   VRT 06-MAY-2021
DEFINITION  sterile alpha motif domain-containing protein 3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325941
VERSION     XP_041325941.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470007.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..528
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..528
                     /product="sterile alpha motif domain-containing protein 3"
                     /calculated_mol_wt=61158
     Region          1..66
                     /region_name="SAM_Samd3"
                     /note="SAM domain of Samd3 subfamily; cd09526"
                     /db_xref="CDD:188925"
     CDS             1..528
                     /gene="SAMD3"
                     /coded_by="XM_041470007.1:19..1605"
                     /db_xref="GeneID:121354931"
ORIGIN      
        1 meswsveqvc nwlkqrnlge lvpkfreeei sgaallalnd rmvqqlvkki ghqavlmdli
       61 kkyqqqksgl esltycceta sqkfpevisg atdrqmlnss dpveqkylcs aenkkglidh
      121 rvlkqkknlk sffvrhkmlq wtssyvfpdf pydikcilae kkcpdhstri riieflqadm
      181 tkylegslyp nsqqynivvn allqaypfld edgngfllwk ralkdrfkyv rrpieddeqv
      241 lrnkckfghr rgqsrkssfa entlddvqgq eepghlkgsa mdlhikwlnr eymktqrnwe
      301 evdnrmnvtm eirrkmisdk aplkdvlrlf pflrcpyqlf refqllthmd iykktveile
      361 iysenilsly vvrnnpinim lqenlkqhte edvlkymkmt aaclllpevf gddsslfaav
      421 neevkavtpv levknpfnmn scefalyier eelaqlddct malaalvaaf hvfdipcpkr
      481 ihrtlnfles lvfevrnpas lptpvktgle tpkhpvsdga pstplrsi
//
LOCUS       XP_041325942             648 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325942
VERSION     XP_041325942.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470008.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="eyes absent homolog 4 isoform X1"
                     /calculated_mol_wt=69903
     Region          373..624
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(380..384,474..475,583,607..608,612..613)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..648
                     /gene="EYA4"
                     /coded_by="XM_041470008.1:300..2246"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptydlgvmlp giktesglsq tqsplqsgcl syspgfstpq pgqtpysyqm
      241 pgssftpsst iysnnsvsns tnfsssqqdy ssytafgqnq yaqyysasty gaymtsnnta
      301 dgtsssstyq lqdslpglts qpgtdlhsge fdtvqspstp ikdldertcr ssgsksrgrg
      361 rknnpspppd sdlervfvwd ldetiivfhs lltgsyaqky gkdppmavtl glrmeemifn
      421 ladthlffnd leecdqvhid dvssddngqd lstysfatdg fhaaassanl clptgvrggv
      481 dwmrklafry rrvkelynty knniggllgp akrdawlqlr aeiealtdsw ltnalkslsi
      541 istrsncvnv lvtttqlipa lakvllyslg gafpieniys atkigkescf erimqrfgrk
      601 vvyvvigdgv eeeqaakkaq haflediqsf gplgspsstg trvfvtvs
//
LOCUS       XP_041325943             648 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325943
VERSION     XP_041325943.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470009.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="eyes absent homolog 4 isoform X1"
                     /calculated_mol_wt=69903
     Region          373..624
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(380..384,474..475,583,607..608,612..613)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..648
                     /gene="EYA4"
                     /coded_by="XM_041470009.1:417..2363"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptydlgvmlp giktesglsq tqsplqsgcl syspgfstpq pgqtpysyqm
      241 pgssftpsst iysnnsvsns tnfsssqqdy ssytafgqnq yaqyysasty gaymtsnnta
      301 dgtsssstyq lqdslpglts qpgtdlhsge fdtvqspstp ikdldertcr ssgsksrgrg
      361 rknnpspppd sdlervfvwd ldetiivfhs lltgsyaqky gkdppmavtl glrmeemifn
      421 ladthlffnd leecdqvhid dvssddngqd lstysfatdg fhaaassanl clptgvrggv
      481 dwmrklafry rrvkelynty knniggllgp akrdawlqlr aeiealtdsw ltnalkslsi
      541 istrsncvnv lvtttqlipa lakvllyslg gafpieniys atkigkescf erimqrfgrk
      601 vvyvvigdgv eeeqaakkaq haflediqsf gplgspsstg trvfvtvs
//
LOCUS       XP_041325944             648 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325944
VERSION     XP_041325944.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470010.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="eyes absent homolog 4 isoform X1"
                     /calculated_mol_wt=69903
     Region          373..624
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(380..384,474..475,583,607..608,612..613)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..648
                     /gene="EYA4"
                     /coded_by="XM_041470010.1:462..2408"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptydlgvmlp giktesglsq tqsplqsgcl syspgfstpq pgqtpysyqm
      241 pgssftpsst iysnnsvsns tnfsssqqdy ssytafgqnq yaqyysasty gaymtsnnta
      301 dgtsssstyq lqdslpglts qpgtdlhsge fdtvqspstp ikdldertcr ssgsksrgrg
      361 rknnpspppd sdlervfvwd ldetiivfhs lltgsyaqky gkdppmavtl glrmeemifn
      421 ladthlffnd leecdqvhid dvssddngqd lstysfatdg fhaaassanl clptgvrggv
      481 dwmrklafry rrvkelynty knniggllgp akrdawlqlr aeiealtdsw ltnalkslsi
      541 istrsncvnv lvtttqlipa lakvllyslg gafpieniys atkigkescf erimqrfgrk
      601 vvyvvigdgv eeeqaakkaq haflediqsf gplgspsstg trvfvtvs
//
LOCUS       XP_041325946             648 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325946
VERSION     XP_041325946.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470012.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="eyes absent homolog 4 isoform X1"
                     /calculated_mol_wt=69903
     Region          373..624
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(380..384,474..475,583,607..608,612..613)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..648
                     /gene="EYA4"
                     /coded_by="XM_041470012.1:597..2543"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptydlgvmlp giktesglsq tqsplqsgcl syspgfstpq pgqtpysyqm
      241 pgssftpsst iysnnsvsns tnfsssqqdy ssytafgqnq yaqyysasty gaymtsnnta
      301 dgtsssstyq lqdslpglts qpgtdlhsge fdtvqspstp ikdldertcr ssgsksrgrg
      361 rknnpspppd sdlervfvwd ldetiivfhs lltgsyaqky gkdppmavtl glrmeemifn
      421 ladthlffnd leecdqvhid dvssddngqd lstysfatdg fhaaassanl clptgvrggv
      481 dwmrklafry rrvkelynty knniggllgp akrdawlqlr aeiealtdsw ltnalkslsi
      541 istrsncvnv lvtttqlipa lakvllyslg gafpieniys atkigkescf erimqrfgrk
      601 vvyvvigdgv eeeqaakkaq haflediqsf gplgspsstg trvfvtvs
//
LOCUS       XP_041325947             648 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325947
VERSION     XP_041325947.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470013.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..648
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..648
                     /product="eyes absent homolog 4 isoform X1"
                     /calculated_mol_wt=69903
     Region          373..624
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(380..384,474..475,583,607..608,612..613)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..648
                     /gene="EYA4"
                     /coded_by="XM_041470013.1:384..2330"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptydlgvmlp giktesglsq tqsplqsgcl syspgfstpq pgqtpysyqm
      241 pgssftpsst iysnnsvsns tnfsssqqdy ssytafgqnq yaqyysasty gaymtsnnta
      301 dgtsssstyq lqdslpglts qpgtdlhsge fdtvqspstp ikdldertcr ssgsksrgrg
      361 rknnpspppd sdlervfvwd ldetiivfhs lltgsyaqky gkdppmavtl glrmeemifn
      421 ladthlffnd leecdqvhid dvssddngqd lstysfatdg fhaaassanl clptgvrggv
      481 dwmrklafry rrvkelynty knniggllgp akrdawlqlr aeiealtdsw ltnalkslsi
      541 istrsncvnv lvtttqlipa lakvllyslg gafpieniys atkigkescf erimqrfgrk
      601 vvyvvigdgv eeeqaakkaq haflediqsf gplgspsstg trvfvtvs
//
LOCUS       XP_041325948             644 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325948
VERSION     XP_041325948.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470014.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..644
                     /product="eyes absent homolog 4 isoform X2"
                     /calculated_mol_wt=69888
     Region          373..644
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(375,602,604,620,622..625,631,634,637..638,641..644)
                     /site_type="other"
                     /note="SIX1 interface [polypeptide binding]"
                     /db_xref="CDD:319789"
     Site            order(380..384,474..475,583,607..608,612..613)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..644
                     /gene="EYA4"
                     /coded_by="XM_041470014.1:228..2162"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptydlgvmlp giktesglsq tqsplqsgcl syspgfstpq pgqtpysyqm
      241 pgssftpsst iysnnsvsns tnfsssqqdy ssytafgqnq yaqyysasty gaymtsnnta
      301 dgtsssstyq lqdslpglts qpgtdlhsge fdtvqspstp ikdldertcr ssgsksrgrg
      361 rknnpspppd sdlervfvwd ldetiivfhs lltgsyaqky gkdppmavtl glrmeemifn
      421 ladthlffnd leecdqvhid dvssddngqd lstysfatdg fhaaassanl clptgvrggv
      481 dwmrklafry rrvkelynty knniggllgp akrdawlqlr aeiealtdsw ltnalkslsi
      541 istrsncvnv lvtttqlipa lakvllyslg gafpieniys atkigkescf erimqrfgrk
      601 vvyvvigdgv eeeqaakkhn mpfwrisshs dllalhqale leyl
//
LOCUS       XP_041325949             638 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325949
VERSION     XP_041325949.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470015.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..638
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..638
                     /product="eyes absent homolog 4 isoform X3"
                     /calculated_mol_wt=69277
     Region          367..638
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(369,596,598,614,616..619,625,628,631..632,635..638)
                     /site_type="other"
                     /note="SIX1 interface [polypeptide binding]"
                     /db_xref="CDD:319789"
     Site            order(374..378,468..469,577,601..602,606..607)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..638
                     /gene="EYA4"
                     /coded_by="XM_041470015.1:227..2143"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptydlgvmlp giktesglsq tqsplqsgcl syspgfstpq pgqtpysyqm
      241 pgssftpsst iysnnsvsns tnfsssqqdy ssytafgqnq yaqyysasty gaymtsnnta
      301 dgtsssstyq lqdslpglts qpgefdtvqs pstpikdlde rtcrssgsks rgrgrknnps
      361 pppdsdlerv fvwdldetii vfhslltgsy aqkygkdppm avtlglrmee mifnladthl
      421 ffndleecdq vhiddvssdd ngqdlstysf atdgfhaaas sanlclptgv rggvdwmrkl
      481 afryrrvkel yntyknnigg llgpakrdaw lqlraeieal tdswltnalk slsiistrsn
      541 cvnvlvtttq lipalakvll yslggafpie niysatkigk escferimqr fgrkvvyvvi
      601 gdgveeeqaa kkhnmpfwri sshsdllalh qaleleyl
//
LOCUS       XP_041325950             619 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325950
VERSION     XP_041325950.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470016.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="eyes absent homolog 4 isoform X4"
                     /calculated_mol_wt=66715
     Region          344..595
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(351..355,445..446,554,578..579,583..584)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..619
                     /gene="EYA4"
                     /coded_by="XM_041470016.1:141..2000"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 memqdlasph nlvgstdapg sskldksnls stsvttngtg gdnmtvlnta dwllscstps
       61 satmsllavk tepmnnseta tttgdasldt ftgsvitssg ysprsahqys pqiypskpyp
      121 hilstpaaqt msayagqtqy sgmqqpavyt aysqtgqpys lptydlgvml pgiktesgls
      181 qtqsplqsgc lsyspgfstp qpgqtpysyq mpgssftpss tiysnnsvsn stnfsssqqd
      241 yssytafgqn qyaqyysast ygaymtsnnt adgtssssty qlqdslpglt sqpgtdlhsg
      301 efdtvqspst pikdldertc rssgsksrgr grknnpsppp dsdlervfvw dldetiivfh
      361 slltgsyaqk ygkdppmavt lglrmeemif nladthlffn dleecdqvhi ddvssddngq
      421 dlstysfatd gfhaaassan lclptgvrgg vdwmrklafr yrrvkelynt yknniggllg
      481 pakrdawlql raeiealtds wltnalksls iistrsncvn vlvtttqlip alakvllysl
      541 ggafpieniy satkigkesc ferimqrfgr kvvyvvigdg veeeqaakka qhaflediqs
      601 fgplgspsst gtrvfvtvs
//
LOCUS       XP_041325951             619 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325951
VERSION     XP_041325951.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470017.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="eyes absent homolog 4 isoform X4"
                     /calculated_mol_wt=66715
     Region          344..595
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(351..355,445..446,554,578..579,583..584)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..619
                     /gene="EYA4"
                     /coded_by="XM_041470017.1:191..2050"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 memqdlasph nlvgstdapg sskldksnls stsvttngtg gdnmtvlnta dwllscstps
       61 satmsllavk tepmnnseta tttgdasldt ftgsvitssg ysprsahqys pqiypskpyp
      121 hilstpaaqt msayagqtqy sgmqqpavyt aysqtgqpys lptydlgvml pgiktesgls
      181 qtqsplqsgc lsyspgfstp qpgqtpysyq mpgssftpss tiysnnsvsn stnfsssqqd
      241 yssytafgqn qyaqyysast ygaymtsnnt adgtssssty qlqdslpglt sqpgtdlhsg
      301 efdtvqspst pikdldertc rssgsksrgr grknnpsppp dsdlervfvw dldetiivfh
      361 slltgsyaqk ygkdppmavt lglrmeemif nladthlffn dleecdqvhi ddvssddngq
      421 dlstysfatd gfhaaassan lclptgvrgg vdwmrklafr yrrvkelynt yknniggllg
      481 pakrdawlql raeiealtds wltnalksls iistrsncvn vlvtttqlip alakvllysl
      541 ggafpieniy satkigkesc ferimqrfgr kvvyvvigdg veeeqaakka qhaflediqs
      601 fgplgspsst gtrvfvtvs
//
LOCUS       XP_041325952             619 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325952
VERSION     XP_041325952.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470018.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="eyes absent homolog 4 isoform X4"
                     /calculated_mol_wt=66715
     Region          344..595
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(351..355,445..446,554,578..579,583..584)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..619
                     /gene="EYA4"
                     /coded_by="XM_041470018.1:148..2007"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 memqdlasph nlvgstdapg sskldksnls stsvttngtg gdnmtvlnta dwllscstps
       61 satmsllavk tepmnnseta tttgdasldt ftgsvitssg ysprsahqys pqiypskpyp
      121 hilstpaaqt msayagqtqy sgmqqpavyt aysqtgqpys lptydlgvml pgiktesgls
      181 qtqsplqsgc lsyspgfstp qpgqtpysyq mpgssftpss tiysnnsvsn stnfsssqqd
      241 yssytafgqn qyaqyysast ygaymtsnnt adgtssssty qlqdslpglt sqpgtdlhsg
      301 efdtvqspst pikdldertc rssgsksrgr grknnpsppp dsdlervfvw dldetiivfh
      361 slltgsyaqk ygkdppmavt lglrmeemif nladthlffn dleecdqvhi ddvssddngq
      421 dlstysfatd gfhaaassan lclptgvrgg vdwmrklafr yrrvkelynt yknniggllg
      481 pakrdawlql raeiealtds wltnalksls iistrsncvn vlvtttqlip alakvllysl
      541 ggafpieniy satkigkesc ferimqrfgr kvvyvvigdg veeeqaakka qhaflediqs
      601 fgplgspsst gtrvfvtvs
//
LOCUS       XP_041325953             619 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325953
VERSION     XP_041325953.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470019.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..619
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..619
                     /product="eyes absent homolog 4 isoform X4"
                     /calculated_mol_wt=66715
     Region          344..595
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(351..355,445..446,554,578..579,583..584)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..619
                     /gene="EYA4"
                     /coded_by="XM_041470019.1:505..2364"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 memqdlasph nlvgstdapg sskldksnls stsvttngtg gdnmtvlnta dwllscstps
       61 satmsllavk tepmnnseta tttgdasldt ftgsvitssg ysprsahqys pqiypskpyp
      121 hilstpaaqt msayagqtqy sgmqqpavyt aysqtgqpys lptydlgvml pgiktesgls
      181 qtqsplqsgc lsyspgfstp qpgqtpysyq mpgssftpss tiysnnsvsn stnfsssqqd
      241 yssytafgqn qyaqyysast ygaymtsnnt adgtssssty qlqdslpglt sqpgtdlhsg
      301 efdtvqspst pikdldertc rssgsksrgr grknnpsppp dsdlervfvw dldetiivfh
      361 slltgsyaqk ygkdppmavt lglrmeemif nladthlffn dleecdqvhi ddvssddngq
      421 dlstysfatd gfhaaassan lclptgvrgg vdwmrklafr yrrvkelynt yknniggllg
      481 pakrdawlql raeiealtds wltnalksls iistrsncvn vlvtttqlip alakvllysl
      541 ggafpieniy satkigkesc ferimqrfgr kvvyvvigdg veeeqaakka qhaflediqs
      601 fgplgspsst gtrvfvtvs
//
LOCUS       XP_041325954             637 aa            linear   VRT 06-MAY-2021
DEFINITION  eyes absent homolog 4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325954
VERSION     XP_041325954.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470020.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..637
                     /product="eyes absent homolog 4 isoform X5"
                     /calculated_mol_wt=69162
     Region          36..>349
                     /region_name="DUF5585"
                     /note="Family of unknown function (DUF5585); pfam17823"
                     /db_xref="CDD:465521"
     Region          366..637
                     /region_name="HAD_Eya"
                     /note="protein tyrosine phosphatase domain of the nuclear
                     transcription factor of Eyes absent (Eya) and related
                     phosphatase domains; cd02601"
                     /db_xref="CDD:319789"
     Site            order(368,595,597,613,615..618,624,627,630..631,634..637)
                     /site_type="other"
                     /note="SIX1 interface [polypeptide binding]"
                     /db_xref="CDD:319789"
     Site            order(373..377,467..468,576,600..601,605..606)
                     /site_type="active"
                     /db_xref="CDD:319789"
     CDS             1..637
                     /gene="EYA4"
                     /coded_by="XM_041470020.1:228..2141"
                     /db_xref="GeneID:121354932"
ORIGIN      
        1 medsqdlseq svkkpcpesd gsepqnprsm emqdlasphn lvgstdapgs skldksnlss
       61 tsvttngtgg dnmtvlntad wllscstpss atmsllavkt epmnnsetat ttgdasldtf
      121 tgsvitssgy sprsahqysp qiypskpyph ilstpaaqtm sayagqtqys gmqqpavyta
      181 ysqtgqpysl ptygiktesg lsqtqsplqs gclsyspgfs tpqpgqtpys yqmpgssftp
      241 sstiysnnsv snstnfsssq qdyssytafg qnqyaqyysa stygaymtsn ntadgtssss
      301 tyqlqdslpg ltsqpgtdlh sgefdtvqsp stpikdlder tcrssgsksr grgrknnpsp
      361 ppdsdlervf vwdldetiiv fhslltgsya qkygkdppma vtlglrmeem ifnladthlf
      421 fndleecdqv hiddvssddn gqdlstysfa tdgfhaaass anlclptgvr ggvdwmrkla
      481 fryrrvkely ntyknniggl lgpakrdawl qlraeiealt dswltnalks lsiistrsnc
      541 vnvlvtttql ipalakvlly slggafpien iysatkigke scferimqrf grkvvyvvig
      601 dgveeeqaak khnmpfwris shsdllalhq aleleyl
//
LOCUS       XP_041325956             694 aa            linear   VRT 06-MAY-2021
DEFINITION  DBH-like monooxygenase protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325956
VERSION     XP_041325956.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470022.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..694
                     /product="DBH-like monooxygenase protein 1"
                     /calculated_mol_wt=77129
     Region          122..256
                     /region_name="DOMON_DOH"
                     /note="DOMON-like domain of copper-dependent
                     monooxygenases and related proteins; cd09631"
                     /db_xref="CDD:187689"
     Site            order(150,152..153,165..167,226,228,235,251)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:187689"
     Region          278..402
                     /region_name="Cu2_monooxygen"
                     /note="Copper type II ascorbate-dependent monooxygenase,
                     N-terminal domain; pfam01082"
                     /db_xref="CDD:460053"
     Region          425..573
                     /region_name="Cu2_monoox_C"
                     /note="Copper type II ascorbate-dependent monooxygenase,
                     C-terminal domain; pfam03712"
                     /db_xref="CDD:461021"
     CDS             1..694
                     /gene="MOXD1"
                     /coded_by="XM_041470022.1:1..2085"
                     /db_xref="GeneID:121354934"
ORIGIN      
        1 maglaewrcr rgrlrgcqgt rvrsihpphh alalseeaae sgealvclra ssrgilpael
       61 elrggrgglp staflrfpap agahgrcsgr ggvrpgpdpa agagagagag aaarsyphsa
      121 vldgagayrl rwgrrgsala lrlevrtrgy vgfglsasgg masadivvgg vergqpylqd
      181 yftdenrvlk kdpqqdyhle yamensthti lafsrelhtc dtndksites tvrviwayhh
      241 kdmgeagqny hgsnrgtksl rllnpereev ssaslpyfdl tnkdvpvpdk dttywcqmfk
      301 ipvqhekhhv tkvkpliqkg henlvhhill yqcssnlnds vldyghecyh pnmpdsfltc
      361 etvifawaig gegftypphv glsigtaadp lfvlmevhyd npseteglid nsglrliytp
      421 vlrkydagvi eaglwvslfh nippgmpefv seghctlecl eealgaerpa giqvfavllh
      481 ahlagrairm rhfhngeeqk llayddefdf nfqefqylne ertilpgdnl vtechystvd
      541 rirmtwggls trnemclsyl lyyprinltr casipdimeq lqfigvkeiy rpvrtwpfii
      601 kspkqyknls fmdamnkfkw srseglsynq lvlklpvnvr csktdnaews iqgmtalppe
      661 ierpyktepv icsssscsam hrelslpgai vstr
//
LOCUS       XP_041325957             343 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: trace amine-associated receptor 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325957
VERSION     XP_041325957.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470023.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 3% of CDS bases
            frameshifts          :: corrected 3 indels
            internal stop codons :: corrected 2 genomic stop codons
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="LOW QUALITY PROTEIN: trace amine-associated
                     receptor 2"
                     /calculated_mol_wt=39004
     Region          32..318
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          32..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          65..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          103..125
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          148..164
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          193..217
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          253..275
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          286..311
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..343
                     /gene="TAAR2"
                     /coded_by="XM_041470023.1:1..1032"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 2 codons;
                     deleted 2 bases in 1 codon; substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:121354935"
ORIGIN      
        1 mlslnvlkdl tdcsefrnrs cpehfrsvgi xmylfitavf fltifgnlai iisisnfkql
       61 hsptnflils mavtgfllgf aimpynmvks vencwvlgii fhkihyrfdl mlslasifqi
      121 csiavdcffa ichplhyfst mtvavikxiv aacwsvpvaf scgvvvseay asgiegyeml
      181 lkcxglclim fnkwwrtxff iysglfvpac imigiyvkif tvskahirvs qayrlsknnk
      241 kyelsknkdr ktaktlsivm lgflicwfpw ffailidpfl nfstplplfh slnwfgylns
      301 fcnpllygff ypwfrktfky ilkgkifnph fhtvkvlsed qsq
//
LOCUS       XP_041325959             472 aa            linear   VRT 06-MAY-2021
DEFINITION  low-density lipoprotein receptor-related protein 11, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325959
VERSION     XP_041325959.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470025.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..472
                     /product="low-density lipoprotein receptor-related protein
                     11"
     Region          74..160
                     /region_name="MANEC"
                     /note="MANEC domain; pfam07502"
                     /db_xref="CDD:462186"
     Region          281..315
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(286,294,305..306)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(298,301,305,311..312)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            308..312
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     CDS             1..472
                     /gene="LRP11"
                     /coded_by="XM_041470025.1:<1..1419"
                     /db_xref="GeneID:121354938"
ORIGIN      
        1 aalvlvllaa lggravlpgg rcaapladlr sqisgvetll eefrrqlqqe epgppatagg
       61 gggggercgg sggfsarpds iirtkdsiaa gatflrapga vsgwrqclda ccaeprctla
      121 vvqgparprg taaepgcylf ncthrgrpvc rfaphrgyss ysrrtaggaa ppteeeydep
      181 pqcragqdiv lqspvdwvll dgressddhg ivhyewallq gdssvemqvp qpgtlklshi
      241 qeggyifqlt vtdtagqrss dnvsvtilpm vhsaaacvgv csryqficdd gcciditfac
      301 dgvrqcpdgs detfcqnlss grktvthaal gttqqrtagl tenteensav ntlkatarnq
      361 pllsvdadms nqslsqgpkk qisgfvpdns ssgkrtddkn gdgimmpkrd qlgggrpvpe
      421 tgavlplalg laitallllm vacrlrlvkq klkkarpits eesdylingm yl
//
LOCUS       XP_041325960            1581 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family G member 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325960
VERSION     XP_041325960.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470026.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1581
                     /product="pleckstrin homology domain-containing family G
                     member 1 isoform X1"
                     /calculated_mol_wt=178551
     Region          176..350
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          332..477
                     /region_name="PH_PLEKHG1_G2_G3"
                     /note="Pleckstrin homology domain-containing family G
                     members 1, 2, and 3 pleckstrin homology (PH) domain;
                     cd13243"
                     /db_xref="CDD:270063"
     CDS             1..1581
                     /gene="PLEKHG1"
                     /coded_by="XM_041470026.1:136..4881"
                     /db_xref="GeneID:121354939"
ORIGIN      
        1 mpdktpgate pvprseddfh lplevvpavt ealdskkkee dlhkesrsfr ycekntmdls
       61 dsdrpvsfss tsssassrds hcsfgsrmtl vsnshlglfn qdketgaikl elvparrfss
      121 nkthknsave qedpegslek rpsmprkaep kgaskncams lvteptspkl lyvdrvvqei
      181 letermyvqd lksivkdyld citdqtklsl gteersalfg nirdiyhfns ellqdlence
      241 ndpvaiadcf vsksedfhiy tqyctnyprs vavltecmrn kalakffrer qealqhslpl
      301 gsyllkpvqr ilkyhlllhe ienhldkdte gydvvldaid tmqrvawhin dmkrkhehai
      361 rlqeiqsllt nwkgpdltsy gelvlegtfr iqraknertl flfdkmllit kkrdemfayk
      421 ahilcgnlml vevipkepls fsvfhyknpk mqhtvqaksq qdkrlwilhl krlilenhpa
      481 kipakakqai lemdaihhpg fhyspegemk syqpkegttp hrvrrkseps srvhkvlksn
      541 dvspdmqkrm giegallsqa tklgsseall nsrkkvsles sglesqfqes iepayssdhd
      601 etlqtsateq idaddeeese qqnslqkskg grkrlnsqaa envekrrsln lnkcemqssk
      661 dpsdeesmql ntdlpfscta rqpqsprqfs tpqsnslimn ilgggtsvrn iwtdhqirqa
      721 lfpsrrppye neddeddyhm fvpsastsnt ssapggerrg ssgrpcswhl gqahqnetss
      781 ptrhkivrra ssagesntcp astryktger gsrrevktae gssrnaypes seeltiddie
      841 hvydnisyed lklmgltrre ethhgprrsa rdslyeaenk sssdstskkk tanqkrtsih
      901 asreeillsk eaptssldel riiedniydt irlpetslln fkceplkssk rrsflekdfa
      961 ycdnlrhfvs eeslqfsede gpyhrvpidt dylslvdsss nsdslshksa adklseevde
     1021 iwndlenyik kneektrdrv laafpvckdd mqerlhagst pelsrdveys lstlslpetp
     1081 ifpktvkpra atiseanlrf edttpckens fmslnrssfs sempfvdspy epassvlsst
     1141 paegvendla imdktknrvf mmarqysqki kkanqllkvk speqeqpasr qqkmkhkdla
     1201 aileekkqgg paigariaey sqlydqivfr dstpkvqkes gatpqepssa grfstpmakc
     1261 pprsqpasec sraedwllhs tysngeladf spcsesqdpk sknsfteagt ksnskqlpsa
     1321 gsvpslqisn rlhvpaqrws aiisqpnken lhqdhvynsl grrvssvkpq aysrsqssss
     1381 ivvnrsgesi vydneidkkr lhlnrnfrfn shqtpgiasg ytgpemrkqi penysdmilq
     1441 dsqkvlrvnr aspltaqmat qnyflnfkds eegegddddy veiksedegs dletsqnqtr
     1501 ksdpklrntd avpsemfcgk tvsctpaksa sskhaltpyl taysdsdkln dylwrvpspn
     1561 qqnivqslre kfqclssssf a
//
LOCUS       XP_041325961            1525 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family G member 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325961
VERSION     XP_041325961.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470027.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1525
                     /product="pleckstrin homology domain-containing family G
                     member 1 isoform X2"
                     /calculated_mol_wt=172170
     Region          120..294
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          276..421
                     /region_name="PH_PLEKHG1_G2_G3"
                     /note="Pleckstrin homology domain-containing family G
                     members 1, 2, and 3 pleckstrin homology (PH) domain;
                     cd13243"
                     /db_xref="CDD:270063"
     CDS             1..1525
                     /gene="PLEKHG1"
                     /coded_by="XM_041470027.1:193..4770"
                     /db_xref="GeneID:121354939"
ORIGIN      
        1 mdlsdsdrpv sfsstsssas srdshcsfgs rmtlvsnshl glfnqdketg aiklelvpar
       61 rfssnkthkn saveqedpeg slekrpsmpr kaepkgaskn camslvtept spkllyvdrv
      121 vqeileterm yvqdlksivk dyldcitdqt klslgteers alfgnirdiy hfnsellqdl
      181 encendpvai adcfvsksed fhiytqyctn yprsvavlte cmrnkalakf frerqealqh
      241 slplgsyllk pvqrilkyhl llheienhld kdtegydvvl daidtmqrva whindmkrkh
      301 ehairlqeiq slltnwkgpd ltsygelvle gtfriqrakn ertlflfdkm llitkkrdem
      361 faykahilcg nlmlvevipk eplsfsvfhy knpkmqhtvq aksqqdkrlw ilhlkrlile
      421 nhpakipaka kqailemdai hhpgfhyspe gemksyqpke gttphrvrrk sepssrvhkv
      481 lksndvspdm qkrmgiegal lsqatklgss eallnsrkkv slessglesq fqesiepays
      541 sdhdetlqts ateqidadde eeseqqnslq kskggrkrln sqaaenvekr rslnlnkcem
      601 qsskdpsdee smqlntdlpf sctarqpqsp rqfstpqsns limnilgggt svrniwtdhq
      661 irqalfpsrr ppyenedded dyhmfvpsas tsntssapgg errgssgrpc swhlgqahqn
      721 etssptrhki vrrassages ntcpastryk tgergsrrev ktaegssrna ypesseelti
      781 ddiehvydni syedlklmgl trreethhgp rrsardslye aenksssdst skkktanqkr
      841 tsihasreei llskeaptss ldelriiedn iydtirlpet sllnfkcepl ksskrrsfle
      901 kdfaycdnlr hfvseeslqf sedegpyhrv pidtdylslv dsssnsdsls hksaadklse
      961 evdeiwndle nyikkneekt rdrvlaafpv ckddmqerlh agstpelsrd veyslstlsl
     1021 petpifpktv kpraatisea nlrfedttpc kensfmslnr ssfssempfv dspyepassv
     1081 lsstpaegve ndlaimdktk nrvfmmarqy sqkikkanql lkvkspeqeq pasrqqkmkh
     1141 kdlaaileek kqggpaigar iaeysqlydq ivfrdstpkv qkesgatpqe pssagrfstp
     1201 makcpprsqp asecsraedw llhstysnge ladfspcses qdpksknsft eagtksnskq
     1261 lpsagsvpsl qisnrlhvpa qrwsaiisqp nkenlhqdhv ynslgrrvss vkpqaysrsq
     1321 ssssivvnrs gesivydnei dkkrlhlnrn frfnshqtpg iasgytgpem rkqipenysd
     1381 milqdsqkvl rvnrasplta qmatqnyfln fkdseegegd dddyveikse degsdletsq
     1441 nqtrksdpkl rntdavpsem fcgktvsctp aksasskhal tpyltaysds dklndylwrv
     1501 pspnqqnivq slrekfqcls sssfa
//
LOCUS       XP_041325962            1581 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family G member 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325962
VERSION     XP_041325962.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470028.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1581
                     /product="pleckstrin homology domain-containing family G
                     member 1 isoform X1"
                     /calculated_mol_wt=178551
     Region          176..350
                     /region_name="RhoGEF"
                     /note="RhoGEF domain; pfam00621"
                     /db_xref="CDD:459876"
     Region          332..477
                     /region_name="PH_PLEKHG1_G2_G3"
                     /note="Pleckstrin homology domain-containing family G
                     members 1, 2, and 3 pleckstrin homology (PH) domain;
                     cd13243"
                     /db_xref="CDD:270063"
     CDS             1..1581
                     /gene="PLEKHG1"
                     /coded_by="XM_041470028.1:286..5031"
                     /db_xref="GeneID:121354939"
ORIGIN      
        1 mpdktpgate pvprseddfh lplevvpavt ealdskkkee dlhkesrsfr ycekntmdls
       61 dsdrpvsfss tsssassrds hcsfgsrmtl vsnshlglfn qdketgaikl elvparrfss
      121 nkthknsave qedpegslek rpsmprkaep kgaskncams lvteptspkl lyvdrvvqei
      181 letermyvqd lksivkdyld citdqtklsl gteersalfg nirdiyhfns ellqdlence
      241 ndpvaiadcf vsksedfhiy tqyctnyprs vavltecmrn kalakffrer qealqhslpl
      301 gsyllkpvqr ilkyhlllhe ienhldkdte gydvvldaid tmqrvawhin dmkrkhehai
      361 rlqeiqsllt nwkgpdltsy gelvlegtfr iqraknertl flfdkmllit kkrdemfayk
      421 ahilcgnlml vevipkepls fsvfhyknpk mqhtvqaksq qdkrlwilhl krlilenhpa
      481 kipakakqai lemdaihhpg fhyspegemk syqpkegttp hrvrrkseps srvhkvlksn
      541 dvspdmqkrm giegallsqa tklgsseall nsrkkvsles sglesqfqes iepayssdhd
      601 etlqtsateq idaddeeese qqnslqkskg grkrlnsqaa envekrrsln lnkcemqssk
      661 dpsdeesmql ntdlpfscta rqpqsprqfs tpqsnslimn ilgggtsvrn iwtdhqirqa
      721 lfpsrrppye neddeddyhm fvpsastsnt ssapggerrg ssgrpcswhl gqahqnetss
      781 ptrhkivrra ssagesntcp astryktger gsrrevktae gssrnaypes seeltiddie
      841 hvydnisyed lklmgltrre ethhgprrsa rdslyeaenk sssdstskkk tanqkrtsih
      901 asreeillsk eaptssldel riiedniydt irlpetslln fkceplkssk rrsflekdfa
      961 ycdnlrhfvs eeslqfsede gpyhrvpidt dylslvdsss nsdslshksa adklseevde
     1021 iwndlenyik kneektrdrv laafpvckdd mqerlhagst pelsrdveys lstlslpetp
     1081 ifpktvkpra atiseanlrf edttpckens fmslnrssfs sempfvdspy epassvlsst
     1141 paegvendla imdktknrvf mmarqysqki kkanqllkvk speqeqpasr qqkmkhkdla
     1201 aileekkqgg paigariaey sqlydqivfr dstpkvqkes gatpqepssa grfstpmakc
     1261 pprsqpasec sraedwllhs tysngeladf spcsesqdpk sknsfteagt ksnskqlpsa
     1321 gsvpslqisn rlhvpaqrws aiisqpnken lhqdhvynsl grrvssvkpq aysrsqssss
     1381 ivvnrsgesi vydneidkkr lhlnrnfrfn shqtpgiasg ytgpemrkqi penysdmilq
     1441 dsqkvlrvnr aspltaqmat qnyflnfkds eegegddddy veiksedegs dletsqnqtr
     1501 ksdpklrntd avpsemfcgk tvsctpaksa sskhaltpyl taysdsdkln dylwrvpspn
     1561 qqnivqslre kfqclssssf a
//
LOCUS       XP_041325963             396 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide chain release factor 1-like, mitochondrial isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325963
VERSION     XP_041325963.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470029.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..396
                     /product="peptide chain release factor 1-like,
                     mitochondrial isoform X1"
                     /calculated_mol_wt=44860
     Region          72..372
                     /region_name="PrfA"
                     /note="Protein chain release factor RF1 [Translation,
                     ribosomal structure and biogenesis]; COG0216"
                     /db_xref="CDD:439986"
     CDS             1..396
                     /gene="MTRF1L"
                     /coded_by="XM_041470029.1:145..1335"
                     /db_xref="GeneID:121354940"
ORIGIN      
        1 mrllsralra aqgyraaalp prslraapvg wplaarrgls arpgleelfa apslrrllea
       61 rargeggaap qlaarvrrlr dkerelrdtr elaqdisden edfrklaete iasceeeiae
      121 lkqqivllli pseetdesdl vmevtagvgg qeamlftsei fdmyqryaay kkwkfeiley
      181 fpselgglrh avasiagvea ykymkfeggv hrvqrvpkte kqgrihtstm tvailpqpte
      241 mrlqispkdl rietkrasga ggqhvnttds avrivhiptg ivsecqqers qirnkekamq
      301 mlcaklynak leeetkkrny arkiqvgtkg rsekirtynf pqdritdhri srsvhhvesf
      361 mlgeemldem iqtvreyady eslmeiisen eknnss
//
LOCUS       XP_041325964             393 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide chain release factor 1-like, mitochondrial isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325964
VERSION     XP_041325964.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470030.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..393
                     /product="peptide chain release factor 1-like,
                     mitochondrial isoform X2"
                     /calculated_mol_wt=44545
     Region          72..369
                     /region_name="PrfA"
                     /note="Protein chain release factor RF1 [Translation,
                     ribosomal structure and biogenesis]; COG0216"
                     /db_xref="CDD:439986"
     CDS             1..393
                     /gene="MTRF1L"
                     /coded_by="XM_041470030.1:145..1326"
                     /db_xref="GeneID:121354940"
ORIGIN      
        1 mrllsralra aqgyraaalp prslraapvg wplaarrgls arpgleelfa apslrrllea
       61 rargeggaap qlaarvrrlr dkerelrdtr elaqdenedf rklaeteias ceeeiaelkq
      121 qivlllipse etdesdlvme vtagvggqea mlftseifdm yqryaaykkw kfeileyfps
      181 elgglrhava siagveayky mkfeggvhrv qrvpktekqg rihtstmtva ilpqptemrl
      241 qispkdlrie tkrasgaggq hvnttdsavr ivhiptgivs ecqqersqir nkekamqmlc
      301 aklynaklee etkkrnyark iqvgtkgrse kirtynfpqd ritdhrisrs vhhvesfmlg
      361 eemldemiqt vreyadyesl meiisenekn nss
//
LOCUS       XP_041325965             255 aa            linear   VRT 06-MAY-2021
DEFINITION  peptide chain release factor 1-like, mitochondrial isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325965
VERSION     XP_041325965.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470031.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="peptide chain release factor 1-like,
                     mitochondrial isoform X3"
                     /calculated_mol_wt=29170
     Region          <1..231
                     /region_name="PrfA"
                     /note="Protein chain release factor RF1 [Translation,
                     ribosomal structure and biogenesis]; COG0216"
                     /db_xref="CDD:439986"
     CDS             1..255
                     /gene="MTRF1L"
                     /coded_by="XM_041470031.1:115..882"
                     /db_xref="GeneID:121354940"
ORIGIN      
        1 mevtagvggq eamlftseif dmyqryaayk kwkfeileyf pselgglrha vasiagveay
       61 kymkfeggvh rvqrvpktek qgrihtstmt vailpqptem rlqispkdlr ietkrasgag
      121 gqhvnttdsa vrivhiptgi vsecqqersq irnkekamqm lcaklynakl eeetkkrnya
      181 rkiqvgtkgr sekirtynfp qdritdhris rsvhhvesfm lgeemldemi qtvreyadye
      241 slmeiisene knnss
//
LOCUS       XP_041325966             345 aa            linear   VRT 06-MAY-2021
DEFINITION  CCN family member 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325966
VERSION     XP_041325966.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470032.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..345
                     /product="CCN family member 2"
                     /calculated_mol_wt=37665
     Region          <37..78
                     /region_name="IGFBP"
                     /note="Insulin-like growth factor binding protein;
                     pfam00219"
                     /db_xref="CDD:459717"
     Region          99..158
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          195..238
                     /region_name="TSP1_CCN"
                     /note="CCN3 Nov like TSP1 domain; pfam19035"
                     /db_xref="CDD:465952"
     Region          249..341
                     /region_name="GHB_like"
                     /note="Glycoprotein hormone beta chain homologues;
                     cl21545"
                     /db_xref="CDD:473907"
     CDS             1..345
                     /gene="CCN2"
                     /coded_by="XM_041470032.1:150..1187"
                     /db_xref="GeneID:121354942"
ORIGIN      
        1 mvpnmfapfa lalllallsp eaqgqecsgq cqcgasptcp agvslvldgc gccrvcakql
       61 gelcterdpc dhhkglfcdf gspanrrigv ctardgapcv fsgmvyrsge sfqssckyqc
      121 tcldgavgcv plcsmdvrlp spdcpyprrv klpgkcceew vcdeakeqta vgpalaayrl
      181 edtygpdptm mranclvqtt ewsacsktcg mgistrvtnd nafcrlekqs rlcmvrpcea
      241 dleenikkgk kcirtpkisk pvkfelsgct svktyrakfc gvctdgrcct phrtatlpve
      301 fkcpdgeimk rkmmfiktca chyncpgdnd ifeslyyrkm ygdma
//
LOCUS       XP_041325967            1369 aa            linear   VRT 06-MAY-2021
DEFINITION  SR-related and CTD-associated factor 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041325967
VERSION     XP_041325967.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470033.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1369
                     /product="SR-related and CTD-associated factor 8"
                     /calculated_mol_wt=149635
     Region          5..146
                     /region_name="VHS_ENTH_ANTH"
                     /note="VHS, ENTH and ANTH domain superfamily; cl02544"
                     /db_xref="CDD:470608"
     Region          487..565
                     /region_name="RRM_SCAF8"
                     /note="RNA recognition motif (RRM) found in SR-related and
                     CTD-associated factor 8 (SCAF8) and similar proteins;
                     cd12462"
                     /db_xref="CDD:409895"
     Region          489..>673
                     /region_name="ELAV_HUD_SF"
                     /note="ELAV/HuD family splicing factor; TIGR01661"
                     /db_xref="CDD:273741"
     Region          882..>1057
                     /region_name="GGN"
                     /note="Gametogenetin; pfam15685"
                     /db_xref="CDD:434857"
     CDS             1..1369
                     /gene="SCAF8"
                     /coded_by="XM_041470033.1:129..4238"
                     /db_xref="GeneID:121354943"
ORIGIN      
        1 meavkafnse lyslndykpp iskakmtqit kaaikaikfy khvvqsvekf iqkckpeykv
       61 pglyvidsiv rqsrhqfgqe kdvfaprfsn niistfqnly rcpgddkkve dsegfvftei
      121 hvigslvkdp lvvldkkiiq plldmaagip ppvvtpvlps ttaamsnntp gtpvtpvtpa
      181 nvaqslpdpw vsqiantdtl aavaqilqsp qgqqlqqliq tlqiqqqkpq psllqaldag
      241 lvvqlqalta qltaaaaaan tlnpleqsvs fnkklmdrfd fgeeseqnee pkketpssql
      301 plvpesvnns lfhqlaeqlq qqnlehlrqq lleqqqpqka speenqegnf gsehsaspsq
      361 gssqqqflev eanvddsmdi qqqdmdideg qdiaeeeife qeekksavrs rsrtrsrsrs
      421 rsprkrrsrs rsgsrkrkhr krsrsrsrer krkssrsyss errarereke rqkkglppir
      481 sktlsvcstt lwvgqvdkka tqqdltnlfe efgqiesinm ipprgcayvc mvhrqdayra
      541 lqklssgsyk igskiikiaw alnkgvktey kqfwdvdlgv syipwekvkl ddlegfaegg
      601 midqetvnte wetarsseaa kentqttqsa tvdkstvitt qteaytqpvt mlqipvapav
      661 pavslvppaf pvtmsvpppg yspippppfl rasfnpsqpp pgympppvpp vvpppvvppp
      721 vvppvvptpl vqpplpiaqe tmkdvpftgl vlpvgtvtsn latptlsags vfnplpinkp
      781 esddkgphlt dlqisssenn rsvqsdvsst sglvggvqpp svssnsgltg egppsagsss
      841 sglaggvqpp svssssgivg gvqpptvssn sglaggmqlp avssssslag giqptnasss
      901 sglmagvppp nassssglla gvhppgvsss pglltgmqpp svssssgvla gvqppsvssn
      961 sgllimpppn vstssglmgv pppnissnsg llamqhpgav pnmphlnisn qrmpgmplid
     1021 irpglmphsp gprfplmqpg mppqrtippp aildpslhpp pprgpfppgd ifnqterpfg
     1081 tpgrqnidni snpekrlplg gdniqqegdr dyrfppvenr dnlnrpspvd vrdsvgrppv
     1141 dpregigrpp vdgrehfarp hidmrenfgr pgmdnlgrre hfgfnsdkhw gqrgdydere
     1201 hhafpiyggp kgfhedrerf rhvnyrfdsr sgpswnrgfe qdahrdfddr rrpwerqrdr
     1261 ddrdfnfcre ingnrfgrdr msnnwippph prvfeyfdga tsqrkadnmp qvngentete
     1321 sqpptaqvqd dpelyeklts sveinkeksd teadiesepv vestetegt
//
LOCUS       XP_041325968             547 aa            linear   VRT 06-MAY-2021
DEFINITION  NADPH oxidase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325968
VERSION     XP_041325968.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470034.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..547
                     /product="NADPH oxidase 3"
                     /calculated_mol_wt=62776
     Region          94..494
                     /region_name="COG4097"
                     /note="Predicted ferric reductase [Inorganic ion transport
                     and metabolism]"
                     /db_xref="CDD:443273"
     Region          294..479
                     /region_name="NOX_Duox_like_FAD_NADP"
                     /note="NADPH oxidase (NOX) catalyzes the generation of
                     reactive oxygen species (ROS) such as superoxide and
                     hydrogen peroxide. ROS were originally identified as
                     bactericidal agents in phagocytes, but are now also
                     implicated in cell signaling and metabolism. NOX...;
                     cd06186"
                     /db_xref="CDD:99783"
     Site            order(321,335..338,351..353,356..359,408)
                     /site_type="other"
                     /note="FAD binding pocket [chemical binding]"
                     /db_xref="CDD:99783"
     Site            order(335,337..338)
                     /site_type="other"
                     /note="FAD binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     Site            403..413
                     /site_type="other"
                     /note="NAD pyrophosphate binding region [chemical
                     binding]"
                     /db_xref="CDD:99783"
     Site            order(403,407..410,412)
                     /site_type="other"
                     /note="beta-alpha-beta stucture motif"
                     /db_xref="CDD:99783"
     Site            order(439..440,443)
                     /site_type="other"
                     /note="NADP ribose binding motif [chemical binding]"
                     /db_xref="CDD:99783"
     CDS             1..547
                     /gene="NOX3"
                     /coded_by="XM_041470034.1:1..1644"
                     /db_xref="GeneID:121354944"
ORIGIN      
        1 mgcwilnekl svllllvwlg lnfylfidtf hwyeddkayl ytrimlgstl awarasatcl
       61 nfncmlillp vcrnlisflr gasiycggal rrqldknitf hkmvaygial natihivahs
      121 inieryhssq skeagelrnk lsglgkspne sylnpirtye tnttgqvltt vagitgvvit
      181 valilimtss telirrssye vfwythhlfv vfftglimhg mgqlvrgqtp qslllhnvty
      241 ckdhywewen tsqcplpefs gnkpvawkwv lspmvlyice rivrfwrfrq eviitkvvth
      301 ssgvlelhmk khgfkmgagq yiflqcpsvs qlewhpftlt sapeedyfsv hirlvgdwta
      361 alfkafgaee kalkelwmlp rlavdgpygs attdifhyrv svciaagigv tpfasilksi
      421 wykccnpdtv lalqkvyfyw icrdpsafew fadllfhlet kmaekwkndf lsyhifltgw
      481 desqathial hcddktdvit glrqktcygr pnwdnefkkl aenhprqntw hsysgsltqr
      541 kdiqssq
//
LOCUS       XP_041325970             596 aa            linear   VRT 06-MAY-2021
DEFINITION  sorting nexin-9 [Pyrgilauda ruficollis].
ACCESSION   XP_041325970
VERSION     XP_041325970.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470036.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..596
                     /product="sorting nexin-9"
                     /calculated_mol_wt=66377
     Region          4..60
                     /region_name="SH3_SNX9"
                     /note="Src Homology 3 domain of Sorting nexin 9; cd11898"
                     /db_xref="CDD:212831"
     Site            order(9,11,14,19,38..39,53,55..56)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212831"
     Region          138..>362
                     /region_name="COG5391"
                     /note="Phox homology (PX) domain protein [Intracellular
                     trafficking and secretion / General function prediction
                     only]"
                     /db_xref="CDD:227680"
     Region          255..365
                     /region_name="PX_domain"
                     /note="The Phox Homology domain, a phosphoinositide
                     binding module; cl02563"
                     /db_xref="CDD:470617"
     Site            order(291..293,318..319,332)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132768"
     Region          397..596
                     /region_name="BAR"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain, a
                     dimerization module that binds membranes and detects
                     membrane curvature; cl12013"
                     /db_xref="CDD:472257"
     Site            order(406,409..410,414,416..417,420..421,423..424,
                     435..436,438..439,442..443,445..446,449,468,471..472,554,
                     557..558,560,565,568..569,571..572,575..576,579..580,
                     582..583,586..587,589..590)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153271"
     CDS             1..596
                     /gene="SNX9"
                     /coded_by="XM_041470036.1:365..2155"
                     /db_xref="GeneID:121354945"
ORIGIN      
        1 matkarvmyd faaepgnnel tvsegeiiti tnpdvgggwl egknsqgerg lvptdyveii
       61 tegakdgisc gnsladqaff dslssntaqt nsaakssnqa siandpwssw nvgksgnwdn
      121 gntvdswatk pesapgqrns asnnweaaaa fghpqayqgp aaaddddwdd dwddpkstsp
      181 sylgyketea seaggiqrgn sraaamklpl nkfpgfakpg meqyllakql akpkekipii
      241 igdygpmwvy ptstfdcvva dpkkgskmyg lksyieyqlt ctntnrsvnh rykhfdwlye
      301 rllvkfglai pipslpdkqv tgrfeeefik mrmerlqawm trmcrhpvvs esevfqqfls
      361 frdekcvgml lkvceslesh ystyyvgkpa csitvreqkc davgrftkam ddgvkelltv
      421 gqehwkrctg plpkeyqkig kalqslalvf stsgyqgesd lngaiteagk tyeeiaslva
      481 dqpkkdlhfl metnheykgf lgcfpdiiaa hkgaiervke sdklvatski tpqdkqnmvk
      541 rvstmayalq aemnhfhsnr iydynsvirl yleqqaqfye tiaqklrqal srfpvm
//
LOCUS       XP_041325971             156 aa            linear   VRT 06-MAY-2021
DEFINITION  ezrin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325971
VERSION     XP_041325971.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470037.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="ezrin-like"
                     /calculated_mol_wt=18045
     Region          3..87
                     /region_name="FERM_F1_Ezrin"
                     /note="FERM (Four.1 protein, Ezrin, Radixin, Moesin)
                     domain, F1 sub-domain, found in Ezrin and similar
                     proteins; cd17239"
                     /db_xref="CDD:340759"
     Site            order(8,52..53,55,71,73..75,77)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:340759"
     Region          88..>156
                     /region_name="FERM_M"
                     /note="FERM central domain; pfam00373"
                     /db_xref="CDD:459788"
     CDS             1..156
                     /gene="LOC121354946"
                     /coded_by="XM_041470037.1:189..659"
                     /db_xref="GeneID:121354946"
ORIGIN      
        1 mpkpinvrvv tmdaelefai qpnttgkqlf dqvvktiglr evwyfglqyv dnkgfqtwlk
       61 ldkkvsaqei rkenplqfrf rakffpedvs eeliqditqk lfflqvkegi lsdeiycppe
      121 tavllgsyav qakfgdynke vhkpgylnse rlipqr
//
LOCUS       XP_041325972            1504 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptojanin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325972
VERSION     XP_041325972.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470038.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1504
                     /product="synaptojanin-2 isoform X1"
                     /calculated_mol_wt=167200
     Region          26..488
                     /region_name="COG5329"
                     /note="Phosphoinositide polyphosphatase (Sac family)
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:227637"
     Region          529..861
                     /region_name="INPP5c_Synj2"
                     /note="Catalytic inositol polyphosphate 5-phosphatase
                     (INPP5c) domain of synaptojanin 2; cd09099"
                     /db_xref="CDD:197333"
     Site            order(537,539,587,664..665,685,688..689,726,728,730,
                     780..781,796,802,854..855)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197333"
     Site            order(537,587,685,726,728,802,854..855)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197333"
     Site            order(539,587,854)
                     /site_type="other"
                     /note="Mg binding site [ion binding]"
                     /db_xref="CDD:197333"
     Site            order(587,664..665,685,688..689,730,780..781,796,854)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197333"
     Site            order(685,728,855)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197333"
     Region          873..1008
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1121..>1452
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1504
                     /gene="SYNJ2"
                     /coded_by="XM_041470038.1:597..5111"
                     /db_xref="GeneID:121354947"
ORIGIN      
        1 malskglrll wkqepgpsal leargrqdcl lleagtvaal tpeekdaikg qygklmdayg
       61 clgelqlkcg ntrlhflvlv tgctsvgkil daevykitat dfcplqeetk edervtalkk
      121 ilnsgmfyfs wpnagsnfdl tvraqkqgdn syesgnsffw nqllhvpfkh yqvncsdwll
      181 kvvcgvvdir tvyashkkak aclisrisce ragvrfhvrg vnddghvsnf veteqtiyld
      241 ddvssfvqir gsvplfweqq tglqvgsrhl rlnrgleana pafdrhmmll keqygkqviv
      301 nllgsrggee vlnrafkkll wasshaedsp minfdyhqfa kggkteklen llrpqlklhw
      361 edfgiftkge hvsprlqtgt frmncldcld rsnsvqsfva qeilfaqles ldlnskpiie
      421 rfvesykemw tlngqnlsrv fsgnralegk nkvgklkdga rsvsrtiqsn ffdtvkqeai
      481 elllmgdfyr eeyadkgkml mdqtallvtp silkamserq feftsskrvr vatgtwnvng
      541 gkqfrsnilg tseltdwlld spklsgvsef qdddncppdi favgfeemve lsagnivnas
      601 ttnrkmwgeq lqkaisrthr yiqltsaqlv gvclfifvrp yhvpfirdva idtvktgmgg
      661 kagnkgavsi rfqfystsfc ficshltagq tqvkernedy keitqklsfp mgqnmfshdy
      721 vfwcgdfnyr inltyeevfy flkrqdwktl lefdqlqqqk sngkifkdfh egtinfgpty
      781 kydvgseayd tsdkcrtpaw tdrvlwwrkk lpfektagei nlldsdlsad tkvrhtwtpg
      841 almyygrael qasdhrpvla ivevevqevn eaardsvfre vssfqgplda tvvvnllspt
      901 peeknefped lrtelmqmfe dygtvvlvri cggqmlvtfa dsksalrvmd idgakvrgri
      961 vkiqpktkdw lkglqeeiar krdsvvpmsp tanshlleen fdfssldyes egdiededdy
     1021 ledalcqhla adtvedmsec pghcastals nksgqpprly kddadladlk releasgers
     1081 rripsrslsi ptrprplqpp qrppppagts gkkspsdgsl spgsqstcsi latakllpga
     1141 pqqppkvrtg iskpynvkqi ktttaeeaee airclmeakg gaqedavkpv ptrnqtsskp
     1201 ealpsitksa sfqgsqagav pvphrpppkv ptpkkpvplq rtgakgenam spedqfdqqt
     1261 aqspfgllep hleagailrp tkitpvpkpr tqagkpqesr gsserqplsa gtaeamvlpp
     1321 qnapfapkvp prrkksapaa fhlqvlqssd nplfraslfn snnnnpgscp qthvpvpsas
     1381 aspensttqp lapsaaelmv klqgpsapag qhpqrlhtss lpentnlldl dihssfplst
     1441 qappatspah tsenlnhpnl kdfshwvtfs ddedssavae gfnkllvseq nkntfmktns
     1501 dlel
//
LOCUS       XP_041325973            1457 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptojanin-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325973
VERSION     XP_041325973.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470039.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1457
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1457
                     /product="synaptojanin-2 isoform X2"
                     /calculated_mol_wt=161682
     Region          26..488
                     /region_name="COG5329"
                     /note="Phosphoinositide polyphosphatase (Sac family)
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:227637"
     Region          529..814
                     /region_name="EEP"
                     /note="Exonuclease-Endonuclease-Phosphatase (EEP) domain
                     superfamily; cl00490"
                     /db_xref="CDD:469791"
     Site            order(537,587,638,679,681,755,807..808)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197306"
     Site            order(587,807)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:197306"
     Site            order(638,681,808)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197306"
     Region          826..961
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          1074..>1405
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1457
                     /gene="SYNJ2"
                     /coded_by="XM_041470039.1:598..4971"
                     /db_xref="GeneID:121354947"
ORIGIN      
        1 malskglrll wkqepgpsal leargrqdcl lleagtvaal tpeekdaikg qygklmdayg
       61 clgelqlkcg ntrlhflvlv tgctsvgkil daevykitat dfcplqeetk edervtalkk
      121 ilnsgmfyfs wpnagsnfdl tvraqkqgdn syesgnsffw nqllhvpfkh yqvncsdwll
      181 kvvcgvvdir tvyashkkak aclisrisce ragvrfhvrg vnddghvsnf veteqtiyld
      241 ddvssfvqir gsvplfweqq tglqvgsrhl rlnrgleana pafdrhmmll keqygkqviv
      301 nllgsrggee vlnrafkkll wasshaedsp minfdyhqfa kggkteklen llrpqlklhw
      361 edfgiftkge hvsprlqtgt frmncldcld rsnsvqsfva qeilfaqles ldlnskpiie
      421 rfvesykemw tlngqnlsrv fsgnralegk nkvgklkdga rsvsrtiqsn ffdtvkqeai
      481 elllmgdfyr eeyadkgkml mdqtallvtp silkamserq feftsskrvr vatgtwnvng
      541 gkqfrsnilg tseltdwlld spklsgvsef qdddncppdi favgfeemve lsagnivnar
      601 dvaidtvktg mggkagnkga vsirfqfyst sfcficshlt agqtqvkern edykeitqkl
      661 sfpmgqnmfs hdyvfwcgdf nyrinltyee vfyflkrqdw ktllefdqlq qqksngkifk
      721 dfhegtinfg ptykydvgse aydtsdkcrt pawtdrvlww rkklpfekta geinlldsdl
      781 sadtkvrhtw tpgalmyygr aelqasdhrp vlaivevevq evneaardsv frevssfqgp
      841 ldatvvvnll sptpeeknef pedlrtelmq mfedygtvvl vricggqmlv tfadsksalr
      901 vmdidgakvr grivkiqpkt kdwlkglqee iarkrdsvvp msptanshll eenfdfssld
      961 yesegdiede ddyledalcq hlaadtvedm secpghcast alsnksgqpp rlykddadla
     1021 dlkreleasg ersrripsrs lsiptrprpl qppqrppppa gtsgkkspsd gslspgsqst
     1081 csilatakll pgapqqppkv rtgiskpynv kqiktttaee aeeairclme akggaqedav
     1141 kpvptrnqts skpealpsit ksasfqgsqa gavpvphrpp pkvptpkkpv plqrtgakge
     1201 namspedqfd qqtaqspfgl lephleagai lrptkitpvp kprtqagkpq esrgsserqp
     1261 lsagtaeamv lppqnapfap kvpprrkksa paafhlqvlq ssdnplfras lfnsnnnnpg
     1321 scpqthvpvp sasaspenst tqplapsaae lmvklqgpsa pagqhpqrlh tsslpentnl
     1381 ldldihssfp lstqappats pahtsenlnh pnlkdfshwv tfsddedssa vaegfnkllv
     1441 seqnkntfmk tnsdlel
//
LOCUS       XP_041325974            1379 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptojanin-2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041325974
VERSION     XP_041325974.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470040.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1379
                     /product="synaptojanin-2 isoform X3"
                     /calculated_mol_wt=153607
     Region          <2..363
                     /region_name="COG5329"
                     /note="Phosphoinositide polyphosphatase (Sac family)
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:227637"
     Region          404..736
                     /region_name="INPP5c_Synj2"
                     /note="Catalytic inositol polyphosphate 5-phosphatase
                     (INPP5c) domain of synaptojanin 2; cd09099"
                     /db_xref="CDD:197333"
     Site            order(412,414,462,539..540,560,563..564,601,603,605,
                     655..656,671,677,729..730)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197333"
     Site            order(412,462,560,601,603,677,729..730)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197333"
     Site            order(414,462,729)
                     /site_type="other"
                     /note="Mg binding site [ion binding]"
                     /db_xref="CDD:197333"
     Site            order(462,539..540,560,563..564,605,655..656,671,729)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197333"
     Site            order(560,603,730)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197333"
     Region          748..883
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          996..>1327
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1379
                     /gene="SYNJ2"
                     /coded_by="XM_041470040.1:133..4272"
                     /db_xref="GeneID:121354947"
ORIGIN      
        1 mfyfswpnag snfdltvraq kqgdnsyesg nsffwnqllh vpfkhyqvnc sdwllkvvcg
       61 vvdirtvyas hkkakaclis risceragvr fhvrgvnddg hvsnfveteq tiyldddvss
      121 fvqirgsvpl fweqqtglqv gsrhlrlnrg leanapafdr hmmllkeqyg kqvivnllgs
      181 rggeevlnra fkkllwassh aedspminfd yhqfakggkt eklenllrpq lklhwedfgi
      241 ftkgehvspr lqtgtfrmnc ldcldrsnsv qsfvaqeilf aqlesldlns kpiierfves
      301 ykemwtlngq nlsrvfsgnr alegknkvgk lkdgarsvsr tiqsnffdtv kqeaielllm
      361 gdfyreeyad kgkmlmdqta llvtpsilka mserqfefts skrvrvatgt wnvnggkqfr
      421 snilgtselt dwlldspkls gvsefqdddn cppdifavgf eemvelsagn ivnasttnrk
      481 mwgeqlqkai srthryiqlt saqlvgvclf ifvrpyhvpf irdvaidtvk tgmggkagnk
      541 gavsirfqfy stsfcficsh ltagqtqvke rnedykeitq klsfpmgqnm fshdyvfwcg
      601 dfnyrinlty eevfyflkrq dwktllefdq lqqqksngki fkdfhegtin fgptykydvg
      661 seaydtsdkc rtpawtdrvl wwrkklpfek tageinllds dlsadtkvrh twtpgalmyy
      721 graelqasdh rpvlaiveve vqevneaard svfrevssfq gpldatvvvn llsptpeekn
      781 efpedlrtel mqmfedygtv vlvricggqm lvtfadsksa lrvmdidgak vrgrivkiqp
      841 ktkdwlkglq eeiarkrdsv vpmsptansh lleenfdfss ldyesegdie deddyledal
      901 cqhlaadtve dmsecpghca stalsnksgq pprlykddad ladlkrelea sgersrrips
      961 rslsiptrpr plqppqrppp pagtsgkksp sdgslspgsq stcsilatak llpgapqqpp
     1021 kvrtgiskpy nvkqikttta eeaeeaircl meakggaqed avkpvptrnq tsskpealps
     1081 itksasfqgs qagavpvphr pppkvptpkk pvplqrtgak genamspedq fdqqtaqspf
     1141 gllephleag ailrptkitp vpkprtqagk pqesrgsser qplsagtaea mvlppqnapf
     1201 apkvpprrkk sapaafhlqv lqssdnplfr aslfnsnnnn pgscpqthvp vpsasaspen
     1261 sttqplapsa aelmvklqgp sapagqhpqr lhtsslpent nlldldihss fplstqappa
     1321 tspahtsenl nhpnlkdfsh wvtfsddeds savaegfnkl lvseqnkntf mktnsdlel
//
LOCUS       XP_041325975            1218 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptojanin-2 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041325975
VERSION     XP_041325975.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470041.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1218
                     /product="synaptojanin-2 isoform X4"
                     /calculated_mol_wt=135227
     Region          <4..202
                     /region_name="COG5329"
                     /note="Phosphoinositide polyphosphatase (Sac family)
                     [Signal transduction mechanisms]"
                     /db_xref="CDD:227637"
     Region          243..575
                     /region_name="INPP5c_Synj2"
                     /note="Catalytic inositol polyphosphate 5-phosphatase
                     (INPP5c) domain of synaptojanin 2; cd09099"
                     /db_xref="CDD:197333"
     Site            order(251,253,301,378..379,399,402..403,440,442,444,
                     494..495,510,516,568..569)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:197333"
     Site            order(251,301,399,440,442,516,568..569)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:197333"
     Site            order(253,301,568)
                     /site_type="other"
                     /note="Mg binding site [ion binding]"
                     /db_xref="CDD:197333"
     Site            order(301,378..379,399,402..403,444,494..495,510,568)
                     /site_type="other"
                     /note="putative PI/IP binding site [chemical binding]"
                     /db_xref="CDD:197333"
     Site            order(399,442,569)
                     /site_type="other"
                     /note="putative phosphate binding site [ion binding]"
                     /db_xref="CDD:197333"
     Region          587..722
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          835..>1166
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     CDS             1..1218
                     /gene="SYNJ2"
                     /coded_by="XM_041470041.1:360..4016"
                     /db_xref="GeneID:121354947"
ORIGIN      
        1 mmllkeqygk qvivnllgsr ggeevlnraf kkllwassha edspminfdy hqfakggkte
       61 klenllrpql klhwedfgif tkgehvsprl qtgtfrmncl dcldrsnsvq sfvaqeilfa
      121 qlesldlnsk piierfvesy kemwtlngqn lsrvfsgnra legknkvgkl kdgarsvsrt
      181 iqsnffdtvk qeaielllmg dfyreeyadk gkmlmdqtal lvtpsilkam serqfeftss
      241 krvrvatgtw nvnggkqfrs nilgtseltd wlldspklsg vsefqdddnc ppdifavgfe
      301 emvelsagni vnasttnrkm wgeqlqkais rthryiqlts aqlvgvclfi fvrpyhvpfi
      361 rdvaidtvkt gmggkagnkg avsirfqfys tsfcficshl tagqtqvker nedykeitqk
      421 lsfpmgqnmf shdyvfwcgd fnyrinltye evfyflkrqd wktllefdql qqqksngkif
      481 kdfhegtinf gptykydvgs eaydtsdkcr tpawtdrvlw wrkklpfekt ageinlldsd
      541 lsadtkvrht wtpgalmyyg raelqasdhr pvlaivevev qevneaards vfrevssfqg
      601 pldatvvvnl lsptpeekne fpedlrtelm qmfedygtvv lvricggqml vtfadsksal
      661 rvmdidgakv rgrivkiqpk tkdwlkglqe eiarkrdsvv pmsptanshl leenfdfssl
      721 dyesegdied eddyledalc qhlaadtved msecpghcas talsnksgqp prlykddadl
      781 adlkreleas gersrripsr slsiptrprp lqppqrpppp agtsgkksps dgslspgsqs
      841 tcsilatakl lpgapqqppk vrtgiskpyn vkqiktttae eaeeairclm eakggaqeda
      901 vkpvptrnqt sskpealpsi tksasfqgsq agavpvphrp ppkvptpkkp vplqrtgakg
      961 enamspedqf dqqtaqspfg llephleaga ilrptkitpv pkprtqagkp qesrgsserq
     1021 plsagtaeam vlppqnapfa pkvpprrkks apaafhlqvl qssdnplfra slfnsnnnnp
     1081 gscpqthvpv psasaspens ttqplapsaa elmvklqgps apagqhpqrl htsslpentn
     1141 lldldihssf plstqappat spahtsenln hpnlkdfshw vtfsddedss avaegfnkll
     1201 vseqnkntfm ktnsdlel
//
LOCUS       XP_041325976             654 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SERAC1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325976
VERSION     XP_041325976.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470042.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..654
                     /product="protein SERAC1 isoform X1"
                     /calculated_mol_wt=73917
     Region          396..537
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     CDS             1..654
                     /gene="SERAC1"
                     /coded_by="XM_041470042.1:67..2031"
                     /db_xref="GeneID:121354948"
ORIGIN      
        1 msvaaycvfc yrkigtsgpa tkkqlpwndi rkiakvtgsl ilggfvfity evlslnkllq
       61 idtqalhqek lksyvyvrta slspseyqgf tykarkeihk avrriletea kifrrpfneq
      121 fstfdgedhe calwlllkrs qsedkairlq avqdlasnsh whdyqyvtva qtcdqrtaig
      181 larskdvdlr fflpppplpk iktdypiede lrlllvslpq tgldpcvqyf tslalressq
      241 tlaaqrgglw cfggnglpyc etlgkipset velfclqalv qhskisshcd kieakgglql
      301 lqriyqlrkd sakiqrniir iignmalder lhssivragw vsvlaevmks phiiqsshas
      361 ralanldrdm vkekypdgvy vlhpqyrssq pvradilfvh gllgaafktw rqqdidrrld
      421 rkasegeedy tqcwpktwla sdcpslriis veydthlsdw kakcpveaqr esiafrssel
      481 ldklkaagig drplvwvshs mggllvkkml vdasknpemd kivnntrgiv fysvphhgsq
      541 laeysinary llfpsvevke lskdspalke lnddflsfak dkkfsvlsfa etlpthigsm
      601 iklhvvpves aeigigdlip vdvnhlnick pkkkdaflyq rtlkfiqdvl aqel
//
LOCUS       XP_041325977             657 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SERAC1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325977
VERSION     XP_041325977.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470043.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..657
                     /product="protein SERAC1 isoform X2"
                     /calculated_mol_wt=74026
     Region          399..540
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     CDS             1..657
                     /gene="SERAC1"
                     /coded_by="XM_041470043.1:173..2146"
                     /db_xref="GeneID:121354948"
ORIGIN      
        1 mqnsygltkm eagssgcgan lpihaeekkl fmigkiakvt gslilggfvf ityevlslnk
       61 llqidtqalh qeklksyvyv rtaslspsey qgftykarke ihkavrrile teakifrrpf
      121 neqfstfdge dhecalwlll krsqsedkai rlqavqdlas nshwhdyqyv tvaqtcdqrt
      181 aiglarskdv dlrfflpppp lpkiktdypi edelrlllvs lpqtgldpcv qyftslalre
      241 ssqtlaaqrg glwcfggngl pycetlgkip setvelfclq alvqhskiss hcdkieakgg
      301 lqllqriyql rkdsakiqrn iiriignmal derlhssivr agwvsvlaev mksphiiqss
      361 hasralanld rdmvkekypd gvyvlhpqyr ssqpvradil fvhgllgaaf ktwrqqdidr
      421 rldrkasege edytqcwpkt wlasdcpslr iisveydthl sdwkakcpve aqresiafrs
      481 selldklkaa gigdrplvwv shsmggllvk kmlvdasknp emdkivnntr givfysvphh
      541 gsqlaeysin aryllfpsve vkelskdspa lkelnddfls fakdkkfsvl sfaetlpthi
      601 gsmiklhvvp vesaeigigd lipvdvnhln ickpkkkdaf lyqrtlkfiq dvlaqel
//
LOCUS       XP_041325978             657 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SERAC1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325978
VERSION     XP_041325978.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470044.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..657
                     /product="protein SERAC1 isoform X2"
                     /calculated_mol_wt=74026
     Region          399..540
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     CDS             1..657
                     /gene="SERAC1"
                     /coded_by="XM_041470044.1:50..2023"
                     /db_xref="GeneID:121354948"
ORIGIN      
        1 mqnsygltkm eagssgcgan lpihaeekkl fmigkiakvt gslilggfvf ityevlslnk
       61 llqidtqalh qeklksyvyv rtaslspsey qgftykarke ihkavrrile teakifrrpf
      121 neqfstfdge dhecalwlll krsqsedkai rlqavqdlas nshwhdyqyv tvaqtcdqrt
      181 aiglarskdv dlrfflpppp lpkiktdypi edelrlllvs lpqtgldpcv qyftslalre
      241 ssqtlaaqrg glwcfggngl pycetlgkip setvelfclq alvqhskiss hcdkieakgg
      301 lqllqriyql rkdsakiqrn iiriignmal derlhssivr agwvsvlaev mksphiiqss
      361 hasralanld rdmvkekypd gvyvlhpqyr ssqpvradil fvhgllgaaf ktwrqqdidr
      421 rldrkasege edytqcwpkt wlasdcpslr iisveydthl sdwkakcpve aqresiafrs
      481 selldklkaa gigdrplvwv shsmggllvk kmlvdasknp emdkivnntr givfysvphh
      541 gsqlaeysin aryllfpsve vkelskdspa lkelnddfls fakdkkfsvl sfaetlpthi
      601 gsmiklhvvp vesaeigigd lipvdvnhln ickpkkkdaf lyqrtlkfiq dvlaqel
//
LOCUS       XP_041325979             654 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SERAC1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325979
VERSION     XP_041325979.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470045.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..654
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..654
                     /product="protein SERAC1 isoform X1"
                     /calculated_mol_wt=73917
     Region          396..537
                     /region_name="EstA"
                     /note="Triacylglycerol esterase/lipase EstA, alpha/beta
                     hydrolase fold [Lipid transport and metabolism]; COG1075"
                     /db_xref="CDD:440693"
     CDS             1..654
                     /gene="SERAC1"
                     /coded_by="XM_041470045.1:497..2461"
                     /db_xref="GeneID:121354948"
ORIGIN      
        1 msvaaycvfc yrkigtsgpa tkkqlpwndi rkiakvtgsl ilggfvfity evlslnkllq
       61 idtqalhqek lksyvyvrta slspseyqgf tykarkeihk avrriletea kifrrpfneq
      121 fstfdgedhe calwlllkrs qsedkairlq avqdlasnsh whdyqyvtva qtcdqrtaig
      181 larskdvdlr fflpppplpk iktdypiede lrlllvslpq tgldpcvqyf tslalressq
      241 tlaaqrgglw cfggnglpyc etlgkipset velfclqalv qhskisshcd kieakgglql
      301 lqriyqlrkd sakiqrniir iignmalder lhssivragw vsvlaevmks phiiqsshas
      361 ralanldrdm vkekypdgvy vlhpqyrssq pvradilfvh gllgaafktw rqqdidrrld
      421 rkasegeedy tqcwpktwla sdcpslriis veydthlsdw kakcpveaqr esiafrssel
      481 ldklkaagig drplvwvshs mggllvkkml vdasknpemd kivnntrgiv fysvphhgsq
      541 laeysinary llfpsvevke lskdspalke lnddflsfak dkkfsvlsfa etlpthigsm
      601 iklhvvpves aeigigdlip vdvnhlnick pkkkdaflyq rtlkfiqdvl aqel
//
LOCUS       XP_041325980              71 aa            linear   VRT 06-MAY-2021
DEFINITION  general transcription factor IIH subunit 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041325980
VERSION     XP_041325980.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470046.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..71
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..71
                     /product="general transcription factor IIH subunit 5"
                     /calculated_mol_wt=7996
     Region          1..69
                     /region_name="Tfb5"
                     /note="Transcription factor TFIIH complex subunit Tfb5;
                     pfam06331"
                     /db_xref="CDD:428891"
     CDS             1..71
                     /gene="GTF2H5"
                     /coded_by="XM_041470046.1:58..273"
                     /db_xref="GeneID:121354950"
ORIGIN      
        1 mvnvlkgvlv ecdpamkqfl lyldesnalg kkfiiqdlde thvfvlaelv nflqervgel
       61 mdqnsfpitq k
//
LOCUS       XP_041325981             165 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: zinc finger C2HC domain-containing protein 1B
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325981
VERSION     XP_041325981.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470047.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 24% of CDS bases
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..165
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..165
                     /product="LOW QUALITY PROTEIN: zinc finger C2HC
                     domain-containing protein 1B"
                     /calculated_mol_wt=18509
     CDS             1..165
                     /gene="ZC2HC1B"
                     /coded_by="XM_041470047.1:1..498"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:121354951"
ORIGIN      
        1 mtrliqcske afnrkckpfi ilrqrlxate vttvkrqslq riyalmsait mkqsgkksnw
       61 kqhyeyflnt iqsakqvtka vkesyllpps pppstnphsw faeapxqrdm efcgkqavsh
      121 aanstrqald kqslterktp tltpavlall eriqkekhtp gkeli
//
LOCUS       XP_041325983             520 aa            linear   VRT 06-MAY-2021
DEFINITION  headcase protein homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041325983
VERSION     XP_041325983.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470049.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..520
                     /product="headcase protein homolog"
                     /calculated_mol_wt=58728
     Region          71..168
                     /region_name="HECA"
                     /note="Headcase protein family homolog; pfam15353"
                     /db_xref="CDD:464667"
     Region          317..512
                     /region_name="Headcase"
                     /note="Headcase protein; pfam16002"
                     /db_xref="CDD:464967"
     CDS             1..520
                     /gene="HECA"
                     /coded_by="XM_041470049.1:1..1563"
                     /db_xref="GeneID:121354952"
ORIGIN      
        1 mlraagargs rvpwrraape rgpgaeripg greaqrspaa aaprlvrssv eksplysvti
       61 engvllfeap catplicsfg rpvdlekddy qkvicnnehc pystwmhlqc fyewessilv
      121 qfncigrars wnekqcrqnm wtkkgydlaf rfcscrcgqg hlkkdtdwyq vkrmqddkkk
      181 ksvlekstgr smaesaeeak kgrpankpqk glsndlqrrh smdrqnsqek gvmggsyavr
      241 spcvspgqsp ptgysilapt hfsgprssry lgeflknaih lephkknmag gsmfrnahfd
      301 ygaaglqahr sghfdtpvqf lrrldlsell thiprhklnt fhvrmeddaq vgqgedlrkf
      361 ilaalsashr nvvncalchr alpvfeqfpl vdgtlflsps rhdeieydvp chlqgrlmhl
      421 yavcvdcleg vhkiicikck srwdgswhql gtmytydila aspccqarln ckhcgkpvid
      481 vrigmqyfse ysnvqqcphc gnldyhfvkp fssfkvleay
//
LOCUS       XP_041325984            2156 aa            linear   VRT 06-MAY-2021
DEFINITION  brefeldin A-inhibited guanine nucleotide-exchange protein 3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041325984
VERSION     XP_041325984.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470050.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2156
                     /product="brefeldin A-inhibited guanine
                     nucleotide-exchange protein 3"
                     /calculated_mol_wt=239258
     Region          5..145
                     /region_name="DCB"
                     /note="dimerization and cyclophilin-binding domain of
                     Mon2; pfam16213"
                     /db_xref="CDD:465072"
     Region          560..772
                     /region_name="Sec7"
                     /note="Sec7 domain; smart00222"
                     /db_xref="CDD:214569"
     Site            order(661..668,710..723)
                     /site_type="active"
                     /note="active site/putative ARF binding site [active]"
                     /db_xref="CDD:238100"
     Region          1218..>1275
                     /region_name="DUF1981"
                     /note="Domain of unknown function (DUF1981); pfam09324"
                     /db_xref="CDD:462756"
     Region          1731..>1819
                     /region_name="BIG2_C"
                     /note="BIG2 C-terminal domain; pfam20252"
                     /db_xref="CDD:466403"
     Region          <2091..2143
                     /region_name="BIG2_C"
                     /note="BIG2 C-terminal domain; pfam20252"
                     /db_xref="CDD:466403"
     CDS             1..2156
                     /gene="ARFGEF3"
                     /coded_by="XM_041470050.1:30..6500"
                     /db_xref="GeneID:121354953"
ORIGIN      
        1 meeilrklqk easgskhrai kesctwaiet ldspdaalki ppyqlrekcl lplqlalesk
       61 smklaqqala gmqkllsder fvsvetdsde kqllnqmlna vkvtpslned lqvevmkvci
      121 etyvsschqr sintavratl sqmlsdltlq lrqkqenmiv enpdtlqkfk sqgtsaeslc
      181 ddvvsvltvl ceklqavind nrqlqllyle cilsmlnsss psmhqhkgft dliwkqlcpa
      241 livilgnpih dktiisahss icleadspss gisdhgrgsg csstapalsg pvartiyyia
      301 aelvrlvgsv esmkpvlqsl yhrmllyppp qhrveaikim keilgsprql cdlagpcsse
      361 seskkrsisk rkshldllkl imdgmteaci kggieacyas vscvfallga ldelsqgrgl
      421 seeqiqlllq rleelkdgte tsrdsmeind adfrwqrril ssenpawesg nekspdisis
      481 vttdtgqttl egdmgqttpe dntenqknsl pspagheske ihyrepeset idqpdvvqrs
      541 htivypditn flsvdcktrs ygsrysesnf svddqdlsrt efdscdqysm aaekdsgrsd
      601 vsdigsdncs ladeeqtprd cpghrslrta alslkllksq eadqhsarlf iqsleallpr
      661 lialpsieev dgalqsfsst fcsgmmhspg fegnlnfnfq tlmnadslyv vshytlllnl
      721 klansdyyrk kpaqapvvlk efmkqvqssg vlmvfsqawv eelyhqvler nmlgeagywg
      781 speehnlpli smltdidglg ssaiggqlma sasaqsplsq nrktddsvva giafaryili
      841 gcwknlidtl stpltgrmag sskglafilg aegakeqnqk ekdsicvsld glrraarlsc
      901 algvaancas alaqmsaasc vqeekeekei qepsdaiaqv kqkveqkleq mgkvqgvclh
      961 tahvlcmdav lnvglemgsh nqdcwphvfr vceyistleh thfsdgaaqp sltitqsqqa
     1021 pggqhpdsep geapqtltpe qettlsshpv iqpvsiqdli kdsskgrafd frggsllsgt
     1081 saakavltls tqadrlfeda adklnltala gflyqlkkas qaqlfhsvtd tvdyslampg
     1141 evkstqdrrs alhlfrlgda mlrivrsksr pllhlmrcws lvaphlveaa chkerhvsqk
     1201 avsfihdilt evlmdwneps hfhfnealfr pferimqlel cdedvqdqvi tsigelvemc
     1261 stqiqsgwrp lfsaletvhs ssksevkeyl vgeysmgkrq apvfdvfeaf lntdniqvfa
     1321 naatsyimcl mkfvkglgev dckemgdcvp gsgsastdlc lpaldylrrc sqllakiykm
     1381 plkpiflsgr lvnlprraqe qsassedgie cilsdfdddt glinvwiill eelttaisnc
     1441 prqhqpptld llfellrdva ktpgpgfgiy avvhlllptm slwlhrshgd hsywdvassn
     1501 fkhaiglsse lvvehiqnfi hsdigyenmi ntmlkdlfkl lvacvaepte iisrvgcsci
     1561 ryvlvtagpv fteemwrlac calqdafsat lepvknllgy fhsgtesfsg dacevkvaap
     1621 slspsaeaey wriramaqqv fmletqcspk tpsnkegfeh aqscvliidl ppekkpnghn
     1681 qrsipfrtiv vsllshqvll qnlydillee fvkgpsnlee kmaiqvpenk lagflryism
     1741 qnlavifdll ldsyrtaref dtrpglkcll kkvsgiggaa nlyrqsamsf niyfhalvca
     1801 iltnqenita eqvkkilfed derstdssqq cssededife etaqvspprg kekrqwrari
     1861 pslsvqpvsn adwgwlikrl hklcmelcnn yiqmhldlen nveeppvfkg dsffilpsfh
     1921 setstpstgg lsgkdtpsed drsqirdqlg dsltprggsg eilllpppls pkpekkeqtk
     1981 kkewwesagn kiytiatdkt iskfmteykk rkqqqamtsf tkevkmekkg ellgsrgpds
     2041 pvlqrpqhll dqgqmrhsfs agpeilrqek rprsgstvss lnisirdaea qiqawtnmvl
     2101 tvlnqiqalp dqtftalqpa vfpcisqltc hvtdirvrqa vrewlgrvgr vydiii
//
LOCUS       XP_041325985            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  WD repeat-containing protein 64 [Pyrgilauda ruficollis].
ACCESSION   XP_041325985
VERSION     XP_041325985.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470051.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="WD repeat-containing protein 64"
                     /calculated_mol_wt=118970
     Region          178..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          224..274
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          284..554
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Site            order(286,304,308,311,323..324,350,354,360..361,374..375,
                     392,397,403..404,418,439,445..446,463..464,482,486,
                     492..493,506..507,526,531,537..538,550..551)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          293..332
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          337..374
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          379..417
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          425..461
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          426..904
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          468..505
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..553
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          560..587
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          650..696
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          704..760
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          767..816
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          823..872
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          876..900
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1058
                     /gene="WDR64"
                     /coded_by="XM_041470051.1:1..3177"
                     /db_xref="GeneID:121354954"
ORIGIN      
        1 msgkkghdke gcfalelidf knaleqfqnl vekliiqktk essglytkdd deidyekfyt
       61 ttrtlfgsav kdqniqaffr kimsnlgerp ewleifgcfr eesvvmpsps kenivllvse
      121 kqqithsvvk rkdvikgivk vpllhltvta sqkglltvfn kqmkvlttis vddtawitgc
      181 dflpnlklvv avtestiilw dykskesegn gfvikpmknc llcvctvtma dnlakdtilm
      241 gddkgyvyll titsddfimk qskaekesqf kvldsesfdt pkrklhddwv gkikyfpalk
      301 rfgscstdsi nsfvlddikr ledhlpvkef svpkgvnaft ycgkakvivt ggndrilrlw
      361 npvvnfsptg kllghkhgiv eivtnekdqh iislscakvf rvwdiqtlsp lqvfyedhgt
      421 peemnafpmv fdndhgllft gsdvidiypl anvtqyskel pqthekslnv llynrachqi
      481 lsictesilk vwdletgsqi yqiedahgln tevtcaaier ngiylatgac dgtvkiwefe
      541 sgqevkalpl vqhsddehrv lkivylkadg gqhalivleq rgkikiiqgd saqtdlyvtw
      601 vlpeivpfpq rnpvvymslk psslktqdff peirllcnts smkndretfl scvdircfdv
      661 lqieggksia tgsangeinl wdfesasvkc lrkttednhg sgvnaiiflv hsvsssrkrs
      721 slsptpsvas dssatseheg sssdqhekna esdeinteik teettdckdt qnlemneqll
      781 karaglspll asahesscvr lwsiqgnlmk ellpfsghps gpltalctdi ftkilltgsk
      841 eghifrwnma sfledsrnrk naikeelcwr ahaaevvdlf ieeeknvivt asidgsvrlw
      901 hamtgyyfgy fgqarkfelt dtsrlilpsd vndfpaiike eskhtekkkv iyplildrdk
      961 lksltespsd leeaeheeav hsfkffrala pekvqhmetf efaskeagai fgflpiyele
     1021 npievsmpns lqrikaekss hkgwekdlds nedlsqdk
//
LOCUS       XP_041325986             288 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325986
VERSION     XP_041325986.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470052.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 41% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=30731
     CDS             1..288
                     /gene="LOC121354955"
                     /coded_by="XM_041470052.1:1..867"
                     /db_xref="GeneID:121354955"
ORIGIN      
        1 mqdvhflrwk taagvggsar gkvseatlfp cprekihsrk hsdgnnkasv syrhnlssha
       61 rrarrhrgpa rserdepalp tpaalapaap gpappallsp rggpvpaprt spaspfrygp
      121 gavrreggdg gparpgwarl glgpgpwqrs ppglarpppa agrgrprapl ralgarragn
      181 kggrerrrrr gcegappgva ggpgggwerg hecrsgcers rylhqdgrvv kaldlrsngr
      241 msawvrtpll vcfpffqfpa lwrlhaipes qcsstcagvw nvrrcpac
//
LOCUS       XP_041325987            1472 aa            linear   VRT 06-MAY-2021
DEFINITION  androglobin [Pyrgilauda ruficollis].
ACCESSION   XP_041325987
VERSION     XP_041325987.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470053.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1472
                     /product="androglobin"
                     /calculated_mol_wt=168936
     Region          47..>252
                     /region_name="CysPc"
                     /note="Calpains, domains IIa, IIb; calcium-dependent
                     cytoplasmic cysteine proteinases, papain-like. Functions
                     in cytoskeletal remodeling processes, cell
                     differentiation, apoptosis and signal transduction;
                     cl00051"
                     /db_xref="CDD:469591"
     Region          666..1097
                     /region_name="Adgb_C_mid-like"
                     /note="C-terminal middle region of Androglobins (Adgbs)
                     and related proteins; including permuted globin domain and
                     IQ motif; cd22307"
                     /db_xref="CDD:412094"
     Region          667..673
                     /region_name="globin helix C"
                     /note="globin helix C [structural motif]"
                     /db_xref="CDD:412094"
     Region          682..687
                     /region_name="globin helix D"
                     /note="globin helix D [structural motif]"
                     /db_xref="CDD:412094"
     Region          689..709
                     /region_name="globin helix E"
                     /note="globin helix E [structural motif]"
                     /db_xref="CDD:412094"
     Region          720..729
                     /region_name="globin helix F"
                     /note="globin helix F [structural motif]"
                     /db_xref="CDD:412094"
     Region          742..760
                     /region_name="globin helix G"
                     /note="globin helix G [structural motif]"
                     /db_xref="CDD:412094"
     Region          769..792
                     /region_name="globin helix H"
                     /note="globin helix H [structural motif]"
                     /db_xref="CDD:412094"
     Region          833..851
                     /region_name="IQ motif"
                     /note="IQ motif [structural motif]"
                     /db_xref="CDD:412094"
     Region          860..876
                     /region_name="globin helix A"
                     /note="globin helix A [structural motif]"
                     /db_xref="CDD:412094"
     Region          877..890
                     /region_name="globin helix B"
                     /note="globin helix B [structural motif]"
                     /db_xref="CDD:412094"
     Region          <1200..1472
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..1472
                     /gene="ADGB"
                     /coded_by="XM_041470053.1:1..4419"
                     /db_xref="GeneID:121354956"
ORIGIN      
        1 mlsrvaasne kwrfpiwpew ndadinaekw dagkagkekp gkgqispgfd dpegkirlpa
       61 slkvhswkrp qefltkevpv vvrnetsfdl vsanehifcc elmrwivsei yavwriynen
      121 slnsetptvv wkpwehiyal ckstkehvpl ynkfgkyvlk lywmgcwrki ivddtmpfse
      181 eenlllpatt cpnelwpmll skaiiklant sihesgtrem eeftvlqtlt gwipeviplq
      241 peyldkvwdf lkeivpefkl pekaapelev ahddtkteet rdselrsels svsklpdste
      301 raatvnndsk etpiptqpem vayagciplh lfeedifslt rmadssekmr qyglshihsh
      361 pvlitrtrsc plvvppeppp lppwklfrlk kqvvvtsepq epvvekpekh veiaslffky
      421 kldiikiptd tyfpqsslkk gfhttsrlts vtetdenesd sngdmnqngr hsnaedysqe
      481 tipllqqnae vlskeehdni slstkqaser adtdmksqtg tkskdetase nisvsretwi
      541 tfedfcacfq klyvfhkpht yaynyqktsf kssdeevfyy llvdslmpie ilvsfsalvy
      601 wyvtegtkqe sstglltvey fswksvtpge lvlkmhtsat katvvnlpvg rhillftvtc
      661 pighhiqlct mvpcvfgeed avlpalqkes irfieqatai lsavgnvinn ysskdelpka
      721 lkelevaycp pglhdtkiak enskvfnkaf wylikcvfdk kefcrykfaf rsftldfeat
      781 disgddivfs gsnrnsssvd vthssnrses seekflssce nqtptseeee aalkiqaiwr
      841 gtyvrkilks repgtkentd veetlknlwt mielnfeqca vtllreifkr ncnsvekftc
      901 yedewckmyf tdytvtyadq ppnawflvfr eifivpedmf iltqvfttip fcrlhvldnd
      961 tqeemphaff kvashvypkn kkgytfvaea htgdqpvpgg kwklrfissq salpflsrea
     1021 vdntystlqf keyyipnkef llfryfvkvt aphtatlqvq tsnsdvlikl qvldnekeit
     1081 svigkgnavi pvfnfwsnqs llssqlknlq isqrstvkgl etgrikkgsr nsskdskiss
     1141 ktdlvqecsv iltdessvse nfennvgspq qshqysieal vlhdswplte sesllvqelk
     1201 emqkdeikvk ktasipkstr tskdnafeki eneklrkesa slesqpgdsn tpywilrivs
     1261 eqkeadflev kkdtrrvdei ramkeawesa epgravkafq ervrfinkya vrdseepiag
     1321 aetadltpss geegkqspet aidsrlktqq kkwelidlsp ytrktlpepv lrnesiiqqq
     1381 qmrkeekfnh yrqfcmlate qrekeeneri llkqnilemy enlqasldea rgrvysirea
     1441 yrnqlleakr ikeeelaaqe aalkaerrkk kk
//
LOCUS       XP_041325988             330 aa            linear   VRT 06-MAY-2021
DEFINITION  putative protein TPRXL [Pyrgilauda ruficollis].
ACCESSION   XP_041325988
VERSION     XP_041325988.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470054.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..330
                     /product="putative protein TPRXL"
                     /calculated_mol_wt=32805
     CDS             1..330
                     /gene="LOC121354957"
                     /coded_by="XM_041470054.1:1..993"
                     /db_xref="GeneID:121354957"
ORIGIN      
        1 metngpnily messpasprk dtghqnltpq tlgysssngg dspsaltpvt cqapgqplpl
       61 pslspppsrs qasplaapap praaaaprsl pasrsssdsr rkisfhlsln aplrggfpsl
      121 pvpalpprps tparagcrgc slpshrpsls sspwhslgra qrprkprvpa pagpprlslq
      181 ppgdgtrkpa rgaatrpvsa gsalpccrfs ssssssaasp tttaaaaatt atsaaaasar
      241 qggprrpdpl rslppppfrs aggggggrrs rrkegrgvra aaaaggvagg vrgcacgacg
      301 gaapaqpepp lgpraapgpl pprslrsesk
//
LOCUS       XP_041325989            1248 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G-protein coupled receptor G6 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325989
VERSION     XP_041325989.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470055.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1248
                     /product="adhesion G-protein coupled receptor G6 isoform
                     X1"
                     /calculated_mol_wt=138795
     Region          43..146
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(49,51,53,80,85,119,143,145)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          153..335
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          793..838
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          853..1127
                     /region_name="7tmB2_GPR126"
                     /note="orphan adhesion receptor GPR126, member of the
                     class B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15996"
                     /db_xref="CDD:320662"
     Region          855..880
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320662"
     Site            order(860,864,907,910..911,914,923,930,1019..1020,1022,
                     1024,1079,1082,1094,1098)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320662"
     Region          890..912
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320662"
     Region          923..950
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320662"
     Region          965..981
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1016..1039
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1062..1087
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1091..1116
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320662"
     CDS             1..1248
                     /gene="ADGRG6"
                     /coded_by="XM_041470055.1:269..4015"
                     /db_xref="GeneID:121354958"
ORIGIN      
        1 mmshgsamwc yhwkwklhhc lclfttyvic mqqaahgcyd crtvltdpsg vftspcfpsd
       61 ypnsqackwi iraphgfiiq ltfidfdiee apgciydslt ldngespmnl cgitakglsy
      121 nsignemivs fksdfsiqkk gfnasyvria vslrnqkvii pqvpdidavs vaetvsvpel
      181 rqftlcfeat kgnsddnddw kvfsytdall relfsfgktt kghflsilgt qcilknalpr
      241 naefftgtfq qvcvvwdsfs gtigiyakst yhvvdcpeif dkvipgngrl vlgsnsnevs
      301 slngdiynfr lwnftmnaqt lanlscdvkg nivdwenefw siptsalkae nnlscgsyli
      361 psssieptsc anlgslcqat vnattptppt vttnmpdtnr ndkpnngglf yrisivvsss
      421 npnsvskvhd vvaewlnrtf qnwnytvyvv nisihpasik egtrqkrsik sfsalallvy
      481 nstnninlee edirqklisn nrtmeegyql htvdvdpvek claeenppny fwpdtrptvt
      541 nftfchgssv qtasrtcylg lqnytsywgq pdlrnctena adianqllnl tgegqqltsd
      601 kvndvvqklk kivndeeide slgstvvtif snilassdsv laasssealk tidalalkih
      661 fagpsmsist rnlalgvssi nstsfkggtf svspqnnasd fqidfdkdqt saiasvvlpp
      721 sllknlsqde fevisraqft ffnknglfqd aenpanltsf vvacsignlt iqdledyvkv
      781 tikhtkiqed pkptcvfwdm nknggsggwn pagcqvdaes nenetvclcn hlthfgvlmd
      841 lqrtvtqidp qntkvltfit yigcgisaif saatlltyia feklrrdyps kilmnlstal
      901 lflnliflld gwiasfdidg lciavaallh ffllatftwm gleavhmyia lvkvfntyir
      961 ryilkfciig wglpalviai vfasantnas hvygkqlygr dangqggddf cwiknevvfy
     1021 vtcagyfgim flmnvamfiv vmvqicgrng krtnrslkee ilrnlrsvvs ltfllgmtwg
     1081 faffawgplt laflylfsif nslqglfifv fhcamkenvq kqwrrhlccg rfrladnsdw
     1141 sktatniikk ssdnlgksls sssigsnsty ltsksksttn tyckrnshte nvfldkpssk
     1201 faqedgeqts iipvhqvidk vkgycnphsd sfykniimsd tfsrstkf
//
LOCUS       XP_041325991            1247 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G-protein coupled receptor G6 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325991
VERSION     XP_041325991.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470057.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1247
                     /product="adhesion G-protein coupled receptor G6 isoform
                     X2"
                     /calculated_mol_wt=138664
     Region          42..145
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(48,50,52,79,84,118,142,144)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          152..334
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          792..837
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          852..1126
                     /region_name="7tmB2_GPR126"
                     /note="orphan adhesion receptor GPR126, member of the
                     class B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15996"
                     /db_xref="CDD:320662"
     Region          854..879
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320662"
     Site            order(859,863,906,909..910,913,922,929,1018..1019,1021,
                     1023,1078,1081,1093,1097)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320662"
     Region          889..911
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320662"
     Region          922..949
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320662"
     Region          964..980
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1015..1038
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1061..1086
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1090..1115
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320662"
     CDS             1..1247
                     /gene="ADGRG6"
                     /coded_by="XM_041470057.1:53..3796"
                     /db_xref="GeneID:121354958"
ORIGIN      
        1 mshgsamwcy hwkwklhhcl clfttyvicm qqaahgcydc rtvltdpsgv ftspcfpsdy
       61 pnsqackwii raphgfiiql tfidfdieea pgciydsltl dngespmnlc gitakglsyn
      121 signemivsf ksdfsiqkkg fnasyvriav slrnqkviip qvpdidavsv aetvsvpelr
      181 qftlcfeatk gnsddnddwk vfsytdallr elfsfgkttk ghflsilgtq cilknalprn
      241 aefftgtfqq vcvvwdsfsg tigiyaksty hvvdcpeifd kvipgngrlv lgsnsnevss
      301 lngdiynfrl wnftmnaqtl anlscdvkgn ivdwenefws iptsalkaen nlscgsylip
      361 sssieptsca nlgslcqatv nattptpptv ttnmpdtnrn dkpnngglfy risivvsssn
      421 pnsvskvhdv vaewlnrtfq nwnytvyvvn isihpasike gtrqkrsiks fsalallvyn
      481 stnninleee dirqklisnn rtmeegyqlh tvdvdpvekc laeenppnyf wpdtrptvtn
      541 ftfchgssvq tasrtcylgl qnytsywgqp dlrnctenaa dianqllnlt gegqqltsdk
      601 vndvvqklkk ivndeeides lgstvvtifs nilassdsvl aasssealkt idalalkihf
      661 agpsmsistr nlalgvssin stsfkggtfs vspqnnasdf qidfdkdqts aiasvvlpps
      721 llknlsqdef evisraqftf fnknglfqda enpanltsfv vacsignlti qdledyvkvt
      781 ikhtkiqedp kptcvfwdmn knggsggwnp agcqvdaesn enetvclcnh lthfgvlmdl
      841 qrtvtqidpq ntkvltfity igcgisaifs aatlltyiaf eklrrdypsk ilmnlstall
      901 flnliflldg wiasfdidgl ciavaallhf fllatftwmg leavhmyial vkvfntyirr
      961 yilkfciigw glpalviaiv fasantnash vygkqlygrd angqggddfc wiknevvfyv
     1021 tcagyfgimf lmnvamfivv mvqicgrngk rtnrslkeei lrnlrsvvsl tfllgmtwgf
     1081 affawgpltl aflylfsifn slqglfifvf hcamkenvqk qwrrhlccgr frladnsdws
     1141 ktatniikks sdnlgkslss ssigsnstyl tsksksttnt yckrnshten vfldkpsskf
     1201 aqedgeqtsi ipvhqvidkv kgycnphsds fykniimsdt fsrstkf
//
LOCUS       XP_041325992            1220 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G-protein coupled receptor G6 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325992
VERSION     XP_041325992.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470058.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1220
                     /product="adhesion G-protein coupled receptor G6 isoform
                     X3"
                     /calculated_mol_wt=135830
     Region          43..146
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(49,51,53,80,85,119,143,145)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          153..335
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          765..810
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          825..1099
                     /region_name="7tmB2_GPR126"
                     /note="orphan adhesion receptor GPR126, member of the
                     class B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15996"
                     /db_xref="CDD:320662"
     Region          827..852
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320662"
     Site            order(832,836,879,882..883,886,895,902,991..992,994,996,
                     1051,1054,1066,1070)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320662"
     Region          862..884
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320662"
     Region          895..922
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320662"
     Region          937..953
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320662"
     Region          988..1011
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1034..1059
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1063..1088
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320662"
     CDS             1..1220
                     /gene="ADGRG6"
                     /coded_by="XM_041470058.1:269..3931"
                     /db_xref="GeneID:121354958"
ORIGIN      
        1 mmshgsamwc yhwkwklhhc lclfttyvic mqqaahgcyd crtvltdpsg vftspcfpsd
       61 ypnsqackwi iraphgfiiq ltfidfdiee apgciydslt ldngespmnl cgitakglsy
      121 nsignemivs fksdfsiqkk gfnasyvria vslrnqkvii pqvpdidavs vaetvsvpel
      181 rqftlcfeat kgnsddnddw kvfsytdall relfsfgktt kghflsilgt qcilknalpr
      241 naefftgtfq qvcvvwdsfs gtigiyakst yhvvdcpeif dkvipgngrl vlgsnsnevs
      301 slngdiynfr lwnftmnaqt lanlscdvkg nivdwenefw siptsalkae nnlscgsyli
      361 psssieptsc anlgslcqgg lfyrisivvs ssnpnsvskv hdvvaewlnr tfqnwnytvy
      421 vvnisihpas ikegtrqkrs iksfsalall vynstnninl eeedirqkli snnrtmeegy
      481 qlhtvdvdpv ekclaeenpp nyfwpdtrpt vtnftfchgs svqtasrtcy lglqnytsyw
      541 gqpdlrncte naadianqll nltgegqqlt sdkvndvvqk lkkivndeei deslgstvvt
      601 ifsnilassd svlaasssea lktidalalk ihfagpsmsi strnlalgvs sinstsfkgg
      661 tfsvspqnna sdfqidfdkd qtsaiasvvl ppsllknlsq defevisraq ftffnknglf
      721 qdaenpanlt sfvvacsign ltiqdledyv kvtikhtkiq edpkptcvfw dmnknggsgg
      781 wnpagcqvda esnenetvcl cnhlthfgvl mdlqrtvtqi dpqntkvltf ityigcgisa
      841 ifsaatllty iafeklrrdy pskilmnlst allflnlifl ldgwiasfdi dglciavaal
      901 lhffllatft wmgleavhmy ialvkvfnty irryilkfci igwglpalvi aivfasantn
      961 ashvygkqly grdangqggd dfcwiknevv fyvtcagyfg imflmnvamf ivvmvqicgr
     1021 ngkrtnrslk eeilrnlrsv vsltfllgmt wgfaffawgp ltlaflylfs ifnslqglfi
     1081 fvfhcamken vqkqwrrhlc cgrfrladns dwsktatnii kkssdnlgks lssssigsns
     1141 tyltskskst tntyckrnsh tenvfldkps skfaqedgeq tsiipvhqvi dkvkgycnph
     1201 sdsfykniim sdtfsrstkf
//
LOCUS       XP_041325993            1193 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G-protein coupled receptor G6 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325993
VERSION     XP_041325993.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470059.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1193
                     /product="adhesion G-protein coupled receptor G6 isoform
                     X4"
                     /calculated_mol_wt=132533
     Region          43..146
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(49,51,53,80,85,119,143,145)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          153..335
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          793..838
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          853..1127
                     /region_name="7tmB2_GPR126"
                     /note="orphan adhesion receptor GPR126, member of the
                     class B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15996"
                     /db_xref="CDD:320662"
     Region          855..880
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320662"
     Site            order(860,864,907,910..911,914,923,930,1019..1020,1022,
                     1024,1079,1082,1094,1098)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320662"
     Region          890..912
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320662"
     Region          923..950
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320662"
     Region          965..981
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1016..1039
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1062..1087
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1091..1116
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320662"
     CDS             1..1193
                     /gene="ADGRG6"
                     /coded_by="XM_041470059.1:269..3850"
                     /db_xref="GeneID:121354958"
ORIGIN      
        1 mmshgsamwc yhwkwklhhc lclfttyvic mqqaahgcyd crtvltdpsg vftspcfpsd
       61 ypnsqackwi iraphgfiiq ltfidfdiee apgciydslt ldngespmnl cgitakglsy
      121 nsignemivs fksdfsiqkk gfnasyvria vslrnqkvii pqvpdidavs vaetvsvpel
      181 rqftlcfeat kgnsddnddw kvfsytdall relfsfgktt kghflsilgt qcilknalpr
      241 naefftgtfq qvcvvwdsfs gtigiyakst yhvvdcpeif dkvipgngrl vlgsnsnevs
      301 slngdiynfr lwnftmnaqt lanlscdvkg nivdwenefw siptsalkae nnlscgsyli
      361 psssieptsc anlgslcqat vnattptppt vttnmpdtnr ndkpnngglf yrisivvsss
      421 npnsvskvhd vvaewlnrtf qnwnytvyvv nisihpasik egtrqkrsik sfsalallvy
      481 nstnninlee edirqklisn nrtmeegyql htvdvdpvek claeenppny fwpdtrptvt
      541 nftfchgssv qtasrtcylg lqnytsywgq pdlrnctena adianqllnl tgegqqltsd
      601 kvndvvqklk kivndeeide slgstvvtif snilassdsv laasssealk tidalalkih
      661 fagpsmsist rnlalgvssi nstsfkggtf svspqnnasd fqidfdkdqt saiasvvlpp
      721 sllknlsqde fevisraqft ffnknglfqd aenpanltsf vvacsignlt iqdledyvkv
      781 tikhtkiqed pkptcvfwdm nknggsggwn pagcqvdaes nenetvclcn hlthfgvlmd
      841 lqrtvtqidp qntkvltfit yigcgisaif saatlltyia feklrrdyps kilmnlstal
      901 lflnliflld gwiasfdidg lciavaallh ffllatftwm gleavhmyia lvkvfntyir
      961 ryilkfciig wglpalviai vfasantnas hvygkqlygr dangqggddf cwiknevvfy
     1021 vtcagyfgim flmnvamfiv vmvqicgrng krtnrslkee ilrnlrsvvs ltfllgmtwg
     1081 faffawgplt laflylfsif nslqglfifv fhcamkenvq kqwrrhlccg rfrladnsdw
     1141 sktatniikk ssdnlgksls sssigsnsty ltsksksttn tyckrnshtd nvf
//
LOCUS       XP_041325994            1190 aa            linear   VRT 06-MAY-2021
DEFINITION  adhesion G-protein coupled receptor G6 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041325994
VERSION     XP_041325994.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470060.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1190
                     /product="adhesion G-protein coupled receptor G6 isoform
                     X5"
                     /calculated_mol_wt=132114
     Region          43..146
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(49,51,53,80,85,119,143,145)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          153..335
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          793..838
                     /region_name="GPS"
                     /note="GPCR proteolysis site, GPS, motif; pfam01825"
                     /db_xref="CDD:460350"
     Region          853..1127
                     /region_name="7tmB2_GPR126"
                     /note="orphan adhesion receptor GPR126, member of the
                     class B2 family of seven-transmembrane G protein-coupled
                     receptors; cd15996"
                     /db_xref="CDD:320662"
     Region          855..880
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320662"
     Site            order(860,864,907,910..911,914,923,930,1019..1020,1022,
                     1024,1079,1082,1094,1098)
                     /site_type="other"
                     /note="putative polypeptide ligand binding pocket
                     [polypeptide binding]"
                     /db_xref="CDD:320662"
     Region          890..912
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320662"
     Region          923..950
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320662"
     Region          965..981
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1016..1039
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1062..1087
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320662"
     Region          1091..1116
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320662"
     CDS             1..1190
                     /gene="ADGRG6"
                     /coded_by="XM_041470060.1:269..3841"
                     /db_xref="GeneID:121354958"
ORIGIN      
        1 mmshgsamwc yhwkwklhhc lclfttyvic mqqaahgcyd crtvltdpsg vftspcfpsd
       61 ypnsqackwi iraphgfiiq ltfidfdiee apgciydslt ldngespmnl cgitakglsy
      121 nsignemivs fksdfsiqkk gfnasyvria vslrnqkvii pqvpdidavs vaetvsvpel
      181 rqftlcfeat kgnsddnddw kvfsytdall relfsfgktt kghflsilgt qcilknalpr
      241 naefftgtfq qvcvvwdsfs gtigiyakst yhvvdcpeif dkvipgngrl vlgsnsnevs
      301 slngdiynfr lwnftmnaqt lanlscdvkg nivdwenefw siptsalkae nnlscgsyli
      361 psssieptsc anlgslcqat vnattptppt vttnmpdtnr ndkpnngglf yrisivvsss
      421 npnsvskvhd vvaewlnrtf qnwnytvyvv nisihpasik egtrqkrsik sfsalallvy
      481 nstnninlee edirqklisn nrtmeegyql htvdvdpvek claeenppny fwpdtrptvt
      541 nftfchgssv qtasrtcylg lqnytsywgq pdlrnctena adianqllnl tgegqqltsd
      601 kvndvvqklk kivndeeide slgstvvtif snilassdsv laasssealk tidalalkih
      661 fagpsmsist rnlalgvssi nstsfkggtf svspqnnasd fqidfdkdqt saiasvvlpp
      721 sllknlsqde fevisraqft ffnknglfqd aenpanltsf vvacsignlt iqdledyvkv
      781 tikhtkiqed pkptcvfwdm nknggsggwn pagcqvdaes nenetvclcn hlthfgvlmd
      841 lqrtvtqidp qntkvltfit yigcgisaif saatlltyia feklrrdyps kilmnlstal
      901 lflnliflld gwiasfdidg lciavaallh ffllatftwm gleavhmyia lvkvfntyir
      961 ryilkfciig wglpalviai vfasantnas hvygkqlygr dangqggddf cwiknevvfy
     1021 vtcagyfgim flmnvamfiv vmvqicgrng krtnrslkee ilrnlrsvvs ltfllgmtwg
     1081 faffawgplt laflylfsif nslqglfifv fhcamkenvq kqwrrhlccg rfrladnsdw
     1141 sktatniikk ssdnlgksls sssigsnsty ltsksksttn tyckrnshtg
//
LOCUS       XP_041325995             327 aa            linear   VRT 06-MAY-2021
DEFINITION  clavesin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041325995
VERSION     XP_041325995.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470061.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="clavesin-2"
                     /calculated_mol_wt=37682
     Region          29..75
                     /region_name="CRAL_TRIO_N"
                     /note="CRAL/TRIO, N-terminal domain; smart01100"
                     /db_xref="CDD:215024"
     Region          101..251
                     /region_name="SEC14"
                     /note="Sec14p-like lipid-binding domain; cd00170"
                     /db_xref="CDD:469559"
     CDS             1..327
                     /gene="CLVS2"
                     /coded_by="XM_041470061.1:1..984"
                     /db_xref="GeneID:121354959"
ORIGIN      
        1 mthlqaglsp etlekarlel nenpdtlhqd iqevrdmvit rpdigflrtd dafilrflra
       61 rkfqhfeafr llaqyfeyrq qnldmfksfk atdpgikqal kdgfpgglan ldhygrkilv
      121 lfaanwdqsr ytlvdilrai llsleamied pelqvngfvl iidwsnftfk qaskltpsml
      181 rlaieglqds fparfggihf vnqpwyihal ytvirpflke ktrkriflhg nnlnslhqli
      241 hpeilpsefg gmlppydmgt wartlldhey dddsecnads yntpakdiek dlspksmkrs
      301 qsvvdpgvlk rmdkneeenm qpllsld
//
LOCUS       XP_041325996             802 aa            linear   VRT 06-MAY-2021
DEFINITION  plasminogen-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325996
VERSION     XP_041325996.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470062.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..802
                     /product="plasminogen-like"
                     /calculated_mol_wt=90721
     Region          25..97
                     /region_name="PAN_AP_HGF"
                     /note="Subfamily of PAN/APPLE-like domains; present in
                     N-terminal (N) domains of plasminogen/hepatocyte growth
                     factor proteins, and various proteins found in Bilateria,
                     such as leech anti-platelet proteins. PAN/APPLE domains
                     fulfill diverse biological functions...; cd01099"
                     /db_xref="CDD:238532"
     Site            order(38,40,52)
                     /site_type="active"
                     /note="putative binding site [active]"
                     /db_xref="CDD:238532"
     Region          102..182
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            112
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(127,137,163,165,173)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          184..263
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            194
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(209,219,244,246,254)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          273..354
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            284
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(299,309,334,336,344)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          372..453
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            383
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(398,408,433,435,443)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          472..553
                     /region_name="KR"
                     /note="Kringle domain; smart00130"
                     /db_xref="CDD:214527"
     Site            482
                     /site_type="active"
                     /note="putative domain interaction site [active]"
                     /db_xref="CDD:238056"
     Site            order(497,508,534,536,544)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:238056"
     Region          573..798
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            573
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(614,657,752)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(746,771,773)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..802
                     /gene="LOC121354960"
                     /coded_by="XM_041470062.1:1..2409"
                     /db_xref="GeneID:121354960"
ORIGIN      
        1 mgiskaafll lfflssvqgs ildryvrteg awllnpmkqv yranseeeca ekceneekfa
       61 craflftskd qqcltltent ktamifrran avlyekriyl leckegkgvd yrgteaktqk
      121 gvqcqkwadn sphkpnytpe kypragleen ycrnpdadek gpwcyttdpd trfdycnipe
      181 cevecmhcsg enyrgvvatt tsglecqrwd sqephshgyl penfpekdlk nnycrnpdge
      241 prpwcfttsp tkrweycdip rcttpppppa pgrqclsgrg edyrgtisvt esgntcqhws
      301 sqsphrhart penypcqgld enycrnpdge krpwcyttnt tarweycnvp scdsakpeap
      361 avdvpeqaev teecyrgngv tyrgtasftr tgkkcqawss msphrhnkta enfpnaglsq
      421 nycrnpdads rpwcyttnpr vrweycdlkk cddqgpetvp kppqttpern peciiengvd
      481 yrgtvaktar grtcqdwssq rphshdyftp tthpraglek nycrnpdgdv ngpwcyttdp
      541 rkaweycdip kcpppqyecg kskfrpklca qrivagcvsh phswpwqisl rtsygmhfcg
      601 gtlidpqwvl taahclekss rpaaykvylg lhreeateps vqirdvekli keprradial
      661 lklsrpavin nhvipvclpk ensvlggree cyvtgwgdtk gtsgggylke tgfpvienki
      721 cnrpeflngr vkkhelcagn ihggtdtcqg dsggplvcld qdkfvqhgvt swglgcaqpm
      781 kpgvyvrvsn yipwiksvme nn
//
LOCUS       XP_041325997             549 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 22 member 3-like [Pyrgilauda ruficollis].
ACCESSION   XP_041325997
VERSION     XP_041325997.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470063.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..549
                     /product="solute carrier family 22 member 3-like"
                     /calculated_mol_wt=60937
     Region          116..512
                     /region_name="MFS_SLC22A1_2_3"
                     /note="Solute carrier family 22 members 1, 2, and 3 (also
                     called Organic cation transporters 1, 2, and 3) of the
                     Major Facilitator Superfamily of transporters; cd17379"
                     /db_xref="CDD:340937"
     Site            order(132..133,136..137,140,164,214..215,217..219,222,237,
                     240..241,244,352,355..356,359..361,364,384,388,439..440,
                     444,448,464,467..468,471..472,475)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340937"
     CDS             1..549
                     /gene="LOC121354961"
                     /coded_by="XM_041470063.1:206..1855"
                     /db_xref="GeneID:121354961"
ORIGIN      
        1 mpsfdevlke agefgrfqkr vffllsqtgi tfsslfasvv flgrapgnfw cripgaaels
       61 ercgwtleee rnftvlplhl gnesvtgece rldvtwdasa scasplaryg ngssgrlpla
      121 pchhgwvyeq prasivseyd lvcgnawmvd lsqailnlgf lagafilgya adrygriiiy
      181 llsclgvgic giivafspnf tvflifrflq gmfgkgtwmt cyvivteivg sdqrmvgivi
      241 qifftlgiii lpgiaylipt wqgiqlaisl pnflfllyyw vvpesprwll trkkgekalk
      301 imrniakhng kflsphysei tinneevsnp sfldlvrtpq mrrntlilmy awftsaliyq
      361 glvmrlgiig gnlyldffis avvelpsafl iivtidrigr rlpfamgniv asiaclitaf
      421 lpedipwlkt tvatlgrlsi tiafevvylv nselypttlr nfgvslcssl cdlggiiapf
      481 llfrlaaiwl elplvifsil aavcgllvll lpetkgislp etvedveqlp shfgkcgkkq
      541 khrdtnsyi
//
LOCUS       XP_041325998            1157 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041325998
VERSION     XP_041325998.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470064.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1157
                     /product="protein FAM184A isoform X1"
                     /calculated_mol_wt=134866
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..873
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <751..>1038
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1157
                     /gene="FAM184A"
                     /coded_by="XM_041470064.1:223..3696"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqr hclgealhks isnisllkqn
      721 lemqlsqsqs slqqlqaqfs qerqrltqei qeleeehqqr hkslqeahil afqnmeetke
      781 qeqkeleerl qqkhseelha lkethkqame gfklemeqel qtlrfelede gkamlaslrs
      841 elnhqhaaai dqlrhnhqqe lvaakmeler sielgrrqek eflcrisdlq delrhrdhhi
      901 aeldkeilhl henisaltke lefkgkeilr ihsesnqqir mheqdlskkh ekeldvltad
      961 hirekqsmla dfnktqellk einsalqisl eemeekyknr esrpedlqli selkdliaer
     1021 dqlikklied kkfyqlelvn retnynkmfn aspnvgvinp lvkqkkkndk stnrfvsvpn
     1081 lsalessgvv gnghpnrldp ipnspihdie fssskplpqp mppkepktfl sppqtdaspv
     1141 aspdpqrqew faryftf
//
LOCUS       XP_041326000            1143 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326000
VERSION     XP_041326000.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470066.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1143
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1143
                     /product="protein FAM184A isoform X2"
                     /calculated_mol_wt=133319
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..859
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <737..>1024
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1143
                     /gene="FAM184A"
                     /coded_by="XM_041470066.1:223..3654"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqi sllkqnlemq lsqsqsslqq
      721 lqaqfsqerq rltqeiqele eehqqrhksl qeahilafqn meetkeqeqk eleerlqqkh
      781 seelhalket hkqamegfkl emeqelqtlr feledegkam laslrselnh qhaaaidqlr
      841 hnhqqelvaa kmelersiel grrqekeflc risdlqdelr hrdhhiaeld keilhlheni
      901 saltkelefk gkeilrihse snqqirmheq dlskkhekel dvltadhire kqsmladfnk
      961 tqellkeins alqisleeme ekyknresrp edlqliselk dliaerdqli kkliedkkfy
     1021 qlelvnretn ynkmfnaspn vgvinplvkq kkkndkstnr fvsvpnlsal essgvvgngh
     1081 pnrldpipns pihdiefsss kplpqpmppk epktflsppq tdaspvaspd pqrqewfary
     1141 ftf
//
LOCUS       XP_041326001            1122 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326001
VERSION     XP_041326001.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470067.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1122
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1122
                     /product="protein FAM184A isoform X3"
                     /calculated_mol_wt=130770
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..873
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1122
                     /gene="FAM184A"
                     /coded_by="XM_041470067.1:223..3591"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqr hclgealhks isnisllkqn
      721 lemqlsqsqs slqqlqaqfs qerqrltqei qeleeehqqr hkslqeahil afqnmeetke
      781 qeqkeleerl qqkhseelha lkethkqame gfklemeqel qtlrfelede gkamlaslrs
      841 elnhqhaaai dqlrhnhqqe lvaakmeler sielgrrqek eflcrisdlq delrhrdhhi
      901 aeldkeilhl henisaltke lefkgkeilr ihsesnqqir mheqdlskkh ekeldvltad
      961 hirekqsmla dfnktqellk einsalqisl eemeekyknr esrpedlqli selkdliaer
     1021 dqlikkliqk kkndkstnrf vsvpnlsale ssgvvgnghp nrldpipnsp ihdiefsssk
     1081 plpqpmppke pktflsppqt daspvaspdp qrqewfaryf tf
//
LOCUS       XP_041326002            1108 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326002
VERSION     XP_041326002.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470068.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1108
                     /product="protein FAM184A isoform X4"
                     /calculated_mol_wt=129080
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..873
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1108
                     /gene="FAM184A"
                     /coded_by="XM_041470068.1:223..3549"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqr hclgealhks isnisllkqn
      721 lemqlsqsqs slqqlqaqfs qerqrltqei qeleeehqqr hkslqeahil afqnmeetke
      781 qeqkeleerl qqkhseelha lkethkqame gfklemeqel qtlrfelede gkamlaslrs
      841 elnhqhaaai dqlrhnhqqe lvaakmeler sielgrrqek eflcrisdlq delrhrdhhi
      901 aeldkeilhl henisaltke lefkgkeilr ihsesnqqis leemeekykn resrpedlql
      961 iselkdliae rdqlikklie dkkfyqlelv nretnynkmf naspnvgvin plvkqkkknd
     1021 kstnrfvsvp nlsalessgv vgnghpnrld pipnspihdi efssskplpq pmppkepktf
     1081 lsppqtdasp vaspdpqrqe wfaryftf
//
LOCUS       XP_041326003            1094 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326003
VERSION     XP_041326003.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470069.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1094
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1094
                     /product="protein FAM184A isoform X5"
                     /calculated_mol_wt=127534
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          177..960
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..1094
                     /gene="FAM184A"
                     /coded_by="XM_041470069.1:223..3507"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqi sllkqnlemq lsqsqsslqq
      721 lqaqfsqerq rltqeiqele eehqqrhksl qeahilafqn meetkeqeqk eleerlqqkh
      781 seelhalket hkqamegfkl emeqelqtlr feledegkam laslrselnh qhaaaidqlr
      841 hnhqqelvaa kmelersiel grrqekeflc risdlqdelr hrdhhiaeld keilhlheni
      901 saltkelefk gkeilrihse snqqisleem eekyknresr pedlqlisel kdliaerdql
      961 ikkliedkkf yqlelvnret nynkmfnasp nvgvinplvk qkkkndkstn rfvsvpnlsa
     1021 lessgvvgng hpnrldpipn spihdiefss skplpqpmpp kepktflspp qtdaspvasp
     1081 dpqrqewfar yftf
//
LOCUS       XP_041326004            1067 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326004
VERSION     XP_041326004.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470070.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1067
                     /product="protein FAM184A isoform X6"
                     /calculated_mol_wt=124816
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..>843
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          <751..>1038
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1067
                     /gene="FAM184A"
                     /coded_by="XM_041470070.1:223..3426"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqr hclgealhks isnisllkqn
      721 lemqlsqsqs slqqlqaqfs qerqrltqei qeleeehqqr hkslqeahil afqnmeetke
      781 qeqkeleerl qqkhseelha lkethkqame gfklemeqel qtlrfelede gkamlaslrs
      841 elnhqhaaai dqlrhnhqqe lvaakmeler sielgrrqek eflcrisdlq delrhrdhhi
      901 aeldkeilhl henisaltke lefkgkeilr ihsesnqqir mheqdlskkh ekeldvltad
      961 hirekqsmla dfnktqellk einsalqisl eemeekyknr esrpedlqli selkdliaer
     1021 dqlikklied kkfyqlelvn retnynkmfn aspnvgvinp lvkpssd
//
LOCUS       XP_041326005            1059 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041326005
VERSION     XP_041326005.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470071.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1059
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1059
                     /product="protein FAM184A isoform X7"
                     /calculated_mol_wt=123438
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..859
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1059
                     /gene="FAM184A"
                     /coded_by="XM_041470071.1:223..3402"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqi sllkqnlemq lsqsqsslqq
      721 lqaqfsqerq rltqeiqele eehqqrhksl qeahilafqn meetkeqeqk eleerlqqkh
      781 seelhalket hkqamegfkl emeqelqtlr feledegkam laslrselnh qhaaaidqlr
      841 hnhqqelvaa kmelersiel grrqekeflc risdlqdelr hrdhhiaeld keilhlheni
      901 saltkelefk gkeilrihse snqqisleem eekyknresr pedlqlisel kdliaerdql
      961 ikkliqkkkn dkstnrfvsv pnlsalessg vvgnghpnrl dpipnspihd iefssskplp
     1021 qpmppkepkt flsppqtdas pvaspdpqrq ewfaryftf
//
LOCUS       XP_041326006            1015 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326006
VERSION     XP_041326006.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470072.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1015
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1015
                     /product="protein FAM184A isoform X8"
                     /calculated_mol_wt=118615
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..>843
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1015
                     /gene="FAM184A"
                     /coded_by="XM_041470072.1:223..3270"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqr hclgealhks isnisllkqn
      721 lemqlsqsqs slqqlqaqfs qerqrltqei qeleeehqqr hkslqeahil afqnmeetke
      781 qeqkeleerl qqkhseelha lkethkqame gfklemeqel qtlrfelede gkamlaslrs
      841 elnhqhaaai dqlrhnhqqe lvaakmeler sielgrrqek eflcrisdlq delrhrdhhi
      901 aeldkeilhl henisaltke lefkgkeilr ihsesnqqir mheqdlskkh ekeldvltad
      961 hirekqsmla dfnktqellk einsalqisp pqtdaspvas pdpqrqewfa ryftf
//
LOCUS       XP_041326007            1001 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM184A isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041326007
VERSION     XP_041326007.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470073.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1001
                     /product="protein FAM184A isoform X9"
                     /calculated_mol_wt=117047
     Region          57..267
                     /region_name="FAM184"
                     /note="Family with sequence similarity 184, A and B;
                     pfam15665"
                     /db_xref="CDD:464788"
     Region          <301..>843
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1001
                     /gene="FAM184A"
                     /coded_by="XM_041470073.1:223..3228"
                     /db_xref="GeneID:121354962"
ORIGIN      
        1 matpgmgwqq pqhsygggsa pgagklgsgs aqaglgaehs adlhfkmskk iaqltkviya
       61 lntkndehea aiqalkdahe eeiqqilaet rekilqyksk vaeemdlkrk iqvleesled
      121 hkkmkhqalt efeaykdrve dmqlcaeaqh vqrvvtmsre veeirkkfee rlrsfiqlqv
      181 qyekdkrtal eelkaahrle iqellkthqs qnatlskgqe kmeelhrlel edlnnkveel
      241 rlekkklied yegklskaqs fyeheldslk rsqlftaesl hackekevel rkefqnqesm
      301 lrknlgklkt elqmvqdeaa slrekcqklq valgtaennv qvlqkqlddv keeemsllsk
      361 hkeveselaa arerlqqqat dlvlkashig mlqatqmtqe vtirdlesek srlkeklsql
      421 eeernllqsk tqslderqrq qilalekkvn earetqreyy ekelvklqar legeaaqlke
      481 ahsktleela wkhhtaieaa hsnankdkkk lqmeleqqfe keklhleddk nqlrqqlenm
      541 keelttklts anqevcrlqd lvrkseqglg taeghisslq eaqeilqkel eltrarlret
      601 tdslysvege ldqerqqhea miaamreeek fkvdrmardl eikwtenlrq ecnklreelr
      661 lqheedkkaa mtqllqlker eknaardgwq kkvedlldqr hclgealhks isnisllkqn
      721 lemqlsqsqs slqqlqaqfs qerqrltqei qeleeehqqr hkslqeahil afqnmeetke
      781 qeqkeleerl qqkhseelha lkethkqame gfklemeqel qtlrfelede gkamlaslrs
      841 elnhqhaaai dqlrhnhqqe lvaakmeler sielgrrqek eflcrisdlq delrhrdhhi
      901 aeldkeilhl henisaltke lefkgkeilr ihsesnqqir mheqdlskkh ekeldvltad
      961 hirekqsmla dfnktqellk einsalqisk rrrtinqqtg l
//
LOCUS       XP_041326008             763 aa            linear   VRT 06-MAY-2021
DEFINITION  monofunctional C1-tetrahydrofolate synthase, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326008
VERSION     XP_041326008.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470074.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..763
                     /product="monofunctional C1-tetrahydrofolate synthase,
                     mitochondrial"
                     /calculated_mol_wt=82216
     Region          1..120
                     /region_name="Rossmann-fold NAD(P)(+)-binding proteins"
                     /note="A large family of proteins that share a
                     Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The
                     NADB domain is found in numerous dehydrogenases of
                     metabolic pathways such as glycolysis, and many other
                     redox enzymes. NAD binding involves numerous...; cl21454"
                     /db_xref="CDD:473865"
     Site            order(19..21,40..41,59..60,80)
                     /site_type="other"
                     /note="NAD(P) binding pocket [chemical binding]"
                     /db_xref="CDD:133449"
     Region          137..763
                     /region_name="PLN02759"
                     /note="Formate--tetrahydrofolate ligase"
                     /db_xref="CDD:178359"
     Site            order(170,173..178,186,242,246,268..269,275..276,279,
                     282..283,286..287,289..290,360,362,364,366..375,389,407,
                     411,433..435,437..438,441..442,444,741..743,747..748,
                     750..752,759)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:349750"
     Site            order(212..216,238,252,254,498..499,585..588,616)
                     /site_type="active"
                     /db_xref="CDD:349750"
     CDS             1..763
                     /gene="MTHFD1L"
                     /coded_by="XM_041470074.1:110..2401"
                     /db_xref="GeneID:121354963"
ORIGIN      
        1 mellediggk kvllvgarga egaalqsvlq rrgaavlsch wkapqlqsel rhadavvfgs
       61 rkpndvpvsw tkpgatvinc ardplsekhs ygqqnspaae ktvgslavam rmqnmvknme
      121 rwiqsqqyrk wdlhslklqp lspvpsdiei sraqspkavd vlakeigllt deieiygqtk
      181 akvrlsller lkdqpdgkyv lvagitptpl gegkstvtvg lvqaltahln insfaclrqp
      241 sqgptfgvkg gaagggyaqv ipmeefnlhl tgdihaitaa nnllaaaida rilhentqsd
      301 kslynrlvpv vngmrgfsai qlarlrrlgi nktdpetlte eeiskfvrld idpstitwqr
      361 vvdtndrflr kitvgqante kgfvrqaqfd iavaseimai lalttslqdm kerlgrmvva
      421 ndkkgqpvta edlgvtgala vlmkdaikpt lmqtlegtpv fvhagpfani ahgnssvlad
      481 kialklvgek gfvvteagfg adigmekffn ikcrasglvp svvvlvatvr alkmhgggpn
      541 vtagaplkke yteenlqlva dgccnlqkqi qitqlfgvpv vvalnvfktd spaevdlvck
      601 iakesgafda vpcnhwsagg kgavklaqav ekaanqknsf kylyslelpi vekiriiaqk
      661 vygaqdiels paaqsqvdry trqgfgnlpi cmakthlsls hqperkgvpa gfilpisdvr
      721 asigagfiyp lvgtmstmpg lptrpcfydi dldpiteqvk glf
//
LOCUS       XP_041326009             540 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-20 receptor subunit alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041326009
VERSION     XP_041326009.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470075.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..540
                     /product="interleukin-20 receptor subunit alpha"
                     /calculated_mol_wt=61320
     Region          <1..73
                     /region_name="Tissue_fac"
                     /note="Tissue factor; pfam01108"
                     /db_xref="CDD:460067"
     Region          85..189
                     /region_name="Interfer-bind"
                     /note="Interferon-alpha/beta receptor, fibronectin type
                     III; pfam09294"
                     /db_xref="CDD:462746"
     CDS             1..540
                     /gene="IL20RA"
                     /coded_by="XM_041470075.1:16..1638"
                     /db_xref="GeneID:121354965"
ORIGIN      
        1 mknvlhwsap egtgdgvlyk vkyavygvgk wirkpecrni nrtwcdlsse tsdyeeqyya
       61 svkaflngac sdwmettrfn pltdtkidpp mvsvsstdrs isivltapek wkrtaeeesv
      121 sllqvypglq ynvsvlnkkt kkrwffsisn ntlvvpwlep gtiycvsaqi hvttpvldsg
      181 fskehcittl kdktedetit itfgyimptm lallfisvsc cwvhkyihih kqkhptnlvw
      241 qytdkckewv fipsekivln lvsvneddce esrrlserks sryntvysdt egrdlpseqv
      301 lkakylldfs ceeislkeda svegnqtgnw ashvrsgaqn twrdknagvv eyehdvrped
      361 fspgqkleek fsalgglqge pqvgledlvd meagqpyspq leiraahlcl gqkteepevi
      421 daadelpset hidfmdlate rsgqtsyhql ekttqgltek egvqtilvdw dphsgrlyip
      481 tlssvenqvc egvlkyddpd kdgillrlcn kgvsaesped qemyllrfke qwglrvemed
//
LOCUS       XP_041326010             461 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326010
VERSION     XP_041326010.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470076.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="tRNA (guanine(10)-N2)-methyltransferase homolog
                     isoform X1"
                     /calculated_mol_wt=53139
     Region          17..337
                     /region_name="TIGR01177"
                     /note="putative methyltransferase, TIGR01177 family"
                     /db_xref="CDD:273486"
     Region          198..388
                     /region_name="Trm11"
                     /note="tRNA G10 N-methylase Trm11 [Translation, ribosomal
                     structure and biogenesis]; COG1041"
                     /db_xref="CDD:440663"
     CDS             1..461
                     /gene="TRMT11"
                     /coded_by="XM_041470076.1:143..1528"
                     /db_xref="GeneID:121354967"
ORIGIN      
        1 malaapalrr yllllaqehl efrlpeitsl lslcggqfsg eqeirvnspf wilnipseem
       61 arglmkrtvc aksifelwgh gksagelyts lknyptdkml pylqsdstyk vhihtfnktl
      121 tqaqkikkid aleflpfkgk vnlknpehif wiledygmnp ndvpeepihl yfgrwiadgq
      181 reliesysvk krhfigntsm daclsfiman hgrvkpndiv ydpfvgtggl lissahfgay
      241 vcgtdidynt ihglgkasrk nqkwrgpden iranlrqygl ekyyldalva dfsrpiwrkg
      301 mlfdaiitdp pygireaprr mgsqketvks versaenhff vsssyhlsdi ffdllkfgae
      361 ylvmggrlvy wlpiyrpeyt eeiiprhpcl klisnceqll sshtsrrlit mekvkefkdq
      421 densylldgq ympyrghnsf rekyfsgvtk riakeekdnq k
//
LOCUS       XP_041326012             406 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA (guanine(10)-N2)-methyltransferase homolog isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326012
VERSION     XP_041326012.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470078.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..406
                     /product="tRNA (guanine(10)-N2)-methyltransferase homolog
                     isoform X2"
                     /calculated_mol_wt=46645
     Region          17..>260
                     /region_name="TIGR01177"
                     /note="putative methyltransferase, TIGR01177 family"
                     /db_xref="CDD:273486"
     Region          198..333
                     /region_name="Trm11"
                     /note="tRNA G10 N-methylase Trm11 [Translation, ribosomal
                     structure and biogenesis]; COG1041"
                     /db_xref="CDD:440663"
     CDS             1..406
                     /gene="TRMT11"
                     /coded_by="XM_041470078.1:143..1363"
                     /db_xref="GeneID:121354967"
ORIGIN      
        1 malaapalrr yllllaqehl efrlpeitsl lslcggqfsg eqeirvnspf wilnipseem
       61 arglmkrtvc aksifelwgh gksagelyts lknyptdkml pylqsdstyk vhihtfnktl
      121 tqaqkikkid aleflpfkgk vnlknpehif wiledygmnp ndvpeepihl yfgrwiadgq
      181 reliesysvk krhfigntsm daclsfiman hgrvkpndiv ydpfvgtggl lissahfgay
      241 vcgtdidynt ihglapygir eaprrmgsqk etvksversa enhffvsssy hlsdiffdll
      301 kfgaeylvmg grlvywlpiy rpeyteeiip rhpclklisn ceqllsshts rrlitmekvk
      361 efkdqdensy lldgqympyr ghnsfrekyf sgvtkriake ekdnqk
//
LOCUS       XP_041326013             153 aa            linear   VRT 06-MAY-2021
DEFINITION  actin-binding Rho-activating protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326013
VERSION     XP_041326013.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470079.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..153
                     /product="actin-binding Rho-activating protein-like"
                     /calculated_mol_wt=17076
     Region          77..152
                     /region_name="Costars"
                     /note="pfam14705"
                     /db_xref="CDD:464274"
     CDS             1..153
                     /gene="LOC121354968"
                     /coded_by="XM_041470079.1:214..675"
                     /db_xref="GeneID:121354968"
ORIGIN      
        1 megekgqsak atgavgdlrk swqswaedhi eyqrknpfss ddrlaskpvh thrgdptygr
       61 ppegsrteqr gkdaqshvgk eveelcliir rtgevgedgh vrvtfgqlfe tyvtisnkvv
      121 gilirarkhg lvhfegemlw qgkdddvvit llq
//
LOCUS       XP_041326014             421 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 35 member D3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326014
VERSION     XP_041326014.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470080.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..421
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..421
                     /product="solute carrier family 35 member D3"
                     /calculated_mol_wt=45142
     Region          7..298
                     /region_name="RhaT"
                     /note="Permease of the drug/metabolite transporter (DMT)
                     superfamily [Carbohydrate transport and metabolism, Amino
                     acid transport and metabolism, General function prediction
                     only]; COG0697"
                     /db_xref="CDD:440461"
     CDS             1..421
                     /gene="SLC35D3"
                     /coded_by="XM_041470080.1:1..1266"
                     /db_xref="GeneID:121354969"
ORIGIN      
        1 mlrwrgrarg vavavahglc sgslnillkf llaryhfafl tllqclssaa aalglealrr
       61 rglaalppfg prlarpfaav aalatlqstl tlwslrglsl pmyvvfkrcl plvtlvtgal
      121 vlrdgmpspg vlvavlittc gaalagagdl tgdamgyvtg vlavlihaay lvliqktsvd
      181 seygpltaqy aiavsatpfl iicsfasmds invwsfpgwk dpamvcifia cvliscamnf
      241 ttlhctyins avttsfvgvv ksiatitvgm vafndveptk lfiagvvvnt lgsiiycvak
      301 yvetrrqsny edlekearee egkrqagdqa lfamekisqg kgaeeaavee sstgqrqsge
      361 eekdvteksa kalvvqekst itqevnrssl keaylgvwrl vrganyikkd ylieneelpn
      421 p
//
LOCUS       XP_041326015             683 aa            linear   VRT 06-MAY-2021
DEFINITION  protein THEMIS [Pyrgilauda ruficollis].
ACCESSION   XP_041326015
VERSION     XP_041326015.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470081.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..683
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..683
                     /product="protein THEMIS"
                     /calculated_mol_wt=77928
     Region          17..265
                     /region_name="CABIT"
                     /note="Cell-cycle sustaining, positive selection;
                     pfam12736"
                     /db_xref="CDD:463686"
     Region          281..493
                     /region_name="CABIT"
                     /note="Cell-cycle sustaining, positive selection;
                     pfam12736"
                     /db_xref="CDD:463686"
     CDS             1..683
                     /gene="THEMIS"
                     /coded_by="XM_041470081.1:1..2052"
                     /db_xref="GeneID:121354970"
ORIGIN      
        1 mastlqkfih sldlralprv lqiqsgiycq dsiyetfgke fslstedvik vigfkinkli
       61 asicennevs qfpakvelpl nfpglykvva dktpyisiee iartvsigpt rfghpsfysa
      121 ndiklenfti khdeqitfns veevhgmmav ncvvvrnkqs hsftlplsqe gefyeceddq
      181 mytlkeiaew kipkgrnriv klsntlhkwd sssplpenfh gslilmpvye vqavmkfrkd
      241 iihilsdldv evkdvtdhyd issflqplsl edifertske fpmvveimeg psgnqkpynl
      301 lstgkeiviy kkyqaarvla semrsdsskr hylipmsykg kfkrrprefp taydleivrn
      361 ekehlhvvat kaftsphkef fsvsvgdqfl vqqcqtsevl yeggkklidv laceqilsds
      421 ykkvllpmym eggfvevihd kkqyhlseic kefhlpfnvk vsvrdlsiek dvlaaapglq
      481 feeeitdsyl lvssasspae sweipvyrln mlvhllskdv qtvappvtra tveevskeey
      541 ymlrryenlt lhppprppkk pttappptla vpkrdvsdvl qapknfyvdt tkkscsdrda
      601 avlelqvscq ndlvhcdnkd mtgkaalvet tvtkglarny eaeeeeeeeh dysyidedii
      661 enirkvfhgt sirndhtlsk grr
//
LOCUS       XP_041326016             329 aa            linear   VRT 06-MAY-2021
DEFINITION  proto-oncogene Mas [Pyrgilauda ruficollis].
ACCESSION   XP_041326016
VERSION     XP_041326016.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470082.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="proto-oncogene Mas"
                     /calculated_mol_wt=37831
     Region          33..311
                     /region_name="7tmA_MrgprH"
                     /note="mas-related G protein-coupled receptor subtype H,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15110"
                     /db_xref="CDD:320238"
     Region          34..60
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320238"
     Region          66..89
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320238"
     Site            order(87,90..91,108..113,115..116,119,162,164..168,195,
                     198..200,202..204,206..207,244,247..248,250..251,254,
                     261..262,265..267,270,273..274)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320238"
     Region          108..136
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320238"
     Region          148..168
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320238"
     Region          195..220
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320238"
     Region          224..254
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320238"
     Region          262..288
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320238"
     CDS             1..329
                     /gene="MAS1"
                     /coded_by="XM_041470082.1:1..990"
                     /db_xref="GeneID:121354971"
ORIGIN      
        1 mdesnitfhp segtenismh rnistqervw eiltplwvim iisflgfcen givlwclcfq
       61 ikrnpftayi thlsiadisl llctfilsie yiagfgfayg fyyyvtttls ivfllgyntg
      121 lylltaisie rclsivypiw yrchrsqhqs aivcailwtl sffmtvaeyl tckddstkeq
      181 fddgnhcqal liftwiltfm ifiplmilss lilvirirrn slrphsskly iiivatvivf
      241 lifampmrll yllnyhhwss llsqqnhvti vlstvnssin plvyffvgss kkkrfkeslk
      301 vvlsraltdg lrprsqevgm sldiaetif
//
LOCUS       XP_041326017             479 aa            linear   VRT 06-MAY-2021
DEFINITION  peptidyl-prolyl cis-trans isomerase-like 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326017
VERSION     XP_041326017.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470083.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..479
                     /product="peptidyl-prolyl cis-trans isomerase-like 4"
                     /calculated_mol_wt=55693
     Region          4..169
                     /region_name="cyclophilin_RRM"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerase domain occuring with a C-terminal RNA
                     recognition motif domain (RRM). This subfamily of the
                     cyclophilin domain family contains a number of eukaryotic
                     cyclophilins having the RRM domain including the...;
                     cd01921"
                     /db_xref="CDD:238902"
     Site            order(43..44,49,107,109,118)
                     /site_type="active"
                     /db_xref="CDD:238902"
     Region          237..319
                     /region_name="RRM_PPIL4"
                     /note="RNA recognition motif (RRM) found in
                     peptidyl-prolyl cis-trans isomerase-like 4 (PPIase) and
                     similar proteins; cd12235"
                     /db_xref="CDD:409681"
     Region          395..>475
                     /region_name="U2AF_lg"
                     /note="U2 snRNP auxilliary factor, large subunit, splicing
                     factor; TIGR01642"
                     /db_xref="CDD:273727"
     CDS             1..479
                     /gene="PPIL4"
                     /coded_by="XM_041470083.1:24..1463"
                     /db_xref="GeneID:121354972"
ORIGIN      
        1 mavllettvg dlvidlytee rpraclnflk lckvkyynyc liynvqrdfi iqtgdpmgtg
       61 rggesifcql ygdqarffea ekvprikhkk kgtvsmvnng sdqhgsqfli ttgenldyld
      121 gvhtvfgevt egmdvlktin etfvdkdfip yqdirinhtv ilddpfddpp glcvpdrspe
      181 ptkeqldsgr igadeeiddm tgqsadeiee vqaekeaktr aillemvgdl pdadikppen
      241 vlfvcklnpv ttgedleiif srfgpiksce virdwktges lcyafiefek eedcekayfk
      301 mdnvliddrr ihvdfsqsva kikwkgkggr ytkedfkdye kerdkpskfa lkdkvkpkqd
      361 akydlvlded veeshtsqsh lakkqkkkkh hhsededddk rtkksedsdr kheercrert
      421 ksekkdrhrs rsrsqerdyt ysrqkdkyre dirvrdwdkk adrsrspkks kdkerskyr
//
LOCUS       XP_041326018             957 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326018
VERSION     XP_041326018.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470084.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..957
                     /product="nuclear receptor coactivator 7 isoform X1"
                     /calculated_mol_wt=108140
     Region          <118..171
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          795..957
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..957
                     /gene="NCOA7"
                     /coded_by="XM_041470084.1:84..2957"
                     /db_xref="GeneID:121354973"
ORIGIN      
        1 metkeekker rqgyfarlkk rrqvkqttet vsanssgspv sktpsekdde skvileqiss
       61 sedsckfpge ketapdkekk kkkynqlkdi rrtelkryys tddnqnksne kkekkmvsqk
      121 phgtieytag nqdtinsial kfnvtpnklv elnklftqti vpgqilfvpd tsagrlsssp
      181 gapvspsssd aeydklpdad larkafkpve rvlsstseed epvvvkflkm ncryftdgkg
      241 vvggvmivtp nnimfdphks dplviengce eyglicpmee vvsialyndi shmkikdalp
      301 sdipkdlcpl yrpgewedls sekdinpfsk fkslskekrq qngdasvalg akqikpsdke
      361 ksadfevlqs sestgsiksk slefpnnita tehlekldad actkdpsrek nasdtktkek
      421 sllgegedef telektssrm drgldrkisv meglladprd lgrtkqqvtk pttevqehla
      481 vdslekkdsv epkadldlel cekqdvipev nkcvstptgk veteldtkke lekdkliefy
      541 lnkdgnvsqs sedlhkaeiq kgennkaigi dltlscsksq anevhtvksm eldsccverk
      601 apsleissaa aeekdlkesv dsslvpavdk tcqetqldnq seirlwllqk iqvpiedmlp
      661 skeeksktpp mflcikvgkp mrksfvsqst tvsqqyskki kqpeywfavp rervdhlytf
      721 fvqwspeiyg kdakeqgfvv vekeeldmid nffsepttks weiitveeak rrksvcsyye
      781 eeedddtlpi lkhhsallen mhieqlarrl parvqgypwr laystlehgt slktlyrksa
      841 sldspvllvi kdmdnqifga yathpfrfsd hyygtgetfl ytfsphfkvf kwsgentyfi
      901 ngdttslelg ggggrfglwl dadlyhgrsn scstfnndil tkkedfiiqd vevwtfe
//
LOCUS       XP_041326019             946 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326019
VERSION     XP_041326019.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470085.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..946
                     /product="nuclear receptor coactivator 7 isoform X2"
                     /calculated_mol_wt=106826
     Region          <118..171
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          784..946
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..946
                     /gene="NCOA7"
                     /coded_by="XM_041470085.1:84..2924"
                     /db_xref="GeneID:121354973"
ORIGIN      
        1 metkeekker rqgyfarlkk rrqvkqttet vsanssgspv sktpsekdde skvileqiss
       61 sedsckfpge ketapdkekk kkkynqlkdi rrtelkryys tddnqnksne kkekkmvsqk
      121 phgtieytag nqdtinsial kfnvtpnklv elnklftqti vpgqilfvpd tsagrlsssp
      181 gapvspsssd aeydklpdad larkafkpve rvlsstseed epvvvkflkm ncryftdgkg
      241 vvggvmivtp nnimfdphks dplviengce eyglicpmee vvsialyndi shmkikdalp
      301 spgewedlss ekdinpfskf kslskekrqq ngdasvalga kqikpsdkek sadfevlqss
      361 estgsiksks lefpnnitat ehlekldada ctkdpsrekn asdtktkeks llgegedeft
      421 elektssrmd rgldrkisvm eglladprdl grtkqqvtkp ttevqehlav dslekkdsve
      481 pkadldlelc ekqdvipevn kcvstptgkv eteldtkkel ekdkliefyl nkdgnvsqss
      541 edlhkaeiqk gennkaigid ltlscsksqa nevhtvksme ldsccverka psleissaaa
      601 eekdlkesvd sslvpavdkt cqetqldnqs eirlwllqki qvpiedmlps keeksktppm
      661 flcikvgkpm rksfvsqstt vsqqyskkik qpeywfavpr ervdhlytff vqwspeiygk
      721 dakeqgfvvv ekeeldmidn ffsepttksw eiitveeakr rksvcsyyee eedddtlpil
      781 khhsallenm hieqlarrlp arvqgypwrl aystlehgts lktlyrksas ldspvllvik
      841 dmdnqifgay athpfrfsdh yygtgetfly tfsphfkvfk wsgentyfin gdttslelgg
      901 gggrfglwld adlyhgrsns cstfnndilt kkedfiiqdv evwtfe
//
LOCUS       XP_041326020             221 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear receptor coactivator 7 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326020
VERSION     XP_041326020.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470086.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..221
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..221
                     /product="nuclear receptor coactivator 7 isoform X3"
                     /calculated_mol_wt=25524
     Region          59..221
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..221
                     /gene="NCOA7"
                     /coded_by="XM_041470086.1:1..666"
                     /db_xref="GeneID:121354973"
ORIGIN      
        1 mkqrqmplni qivycarpdq eepfveiitv eeakrrksvc syyeeeeddd tlpilkhhsa
       61 llenmhieql arrlparvqg ypwrlaystl ehgtslktly rksasldspv llvikdmdnq
      121 ifgayathpf rfsdhyygtg etflytfsph fkvfkwsgen tyfingdtts lelgggggrf
      181 glwldadlyh grsnscstfn ndiltkkedf iiqdvevwtf e
//
LOCUS       XP_041326021            8803 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326021
VERSION     XP_041326021.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470087.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8803
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8803
                     /product="nesprin-1 isoform X1"
                     /calculated_mol_wt=1011354
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          1263..2063
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1773..>2484
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2203..2959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3049..3255
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3155..3160
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3161..3372
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3263..3268
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3367..4031
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3804..4019
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3904..3909
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4117..>4348
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4329..4542
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4435..4436,4438..4441)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4581..5220
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5041..5784
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5950..6165
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(6057..6059,6071..6073)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6279..7092
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          6781..7004
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6891..6896
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6899..7114
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7005..7010
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7019..7215
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7113..7118
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7123..7334
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7222..7227
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7338..7540
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7439..7444
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7442..7653
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7546..7551
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7652..7869
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7764..7769
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7766..7981
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7868..7873
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7985..8195
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8091..8096
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8448..8667
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8555..8560
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8771..8802
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8803
                     /gene="SYNE1"
                     /coded_by="XM_041470087.1:339..26750"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qnmvrkagew
      901 rknieansrl mkkfeesrae lekviqianc clkekgnpee llrkhseffn qldqrvlnaf
      961 lkacdeltdi lpeqeqhslq eavrklhrqw kdlqteapyh lihlkievqk skflvtveec
     1021 kaelarqnkv lsregnermi kehmlffgdk gsyhlcekrl qrmeelcqkl pvsdpvrgtl
     1081 essqrilkdl ksqidstymk ltehsdtwkg yksrfselan wissterelk kikenvndta
     1141 kykqckasvg eirkhihkhg enhswlksrl avltslcpdl eaketedelc klssdfkrll
     1201 dllaeientl gavgdcvqyk eevksaieel innskevqae aekildtesl lqaqqlllhh
     1261 qqrtrrlrak rqdvqkqisq akrlqieggl pstvredlqk legtlenmqq tmekreeqlq
     1321 vtinkweqfe rdketvvkyl nqassvleri lnfsslesls seldqtkels kqteamavqa
     1381 enlvknssei qlgsknkqsl qhqaksiqeq vkkmevtlee diksmemvkn kwdhfgnnfe
     1441 alsnwiaeqe keletletss ssldiqisqi kvinkeidgk itgisnleee akafsqfvts
     1501 gerahikakl tqvkryweel rdhaqrlegt itgnasaqqk yeeslkqvqq svsefeakla
     1561 epltscssaa atyaalqdct dlchtvekls nplaslsagv rkvankekaa qkvtalqqky
     1621 ekvlesakek qnllenllaq wqkqekelsa flawlegcea vgrpaepyvs adriklegel
     1681 lalqdlradi eshtcvyesl lqlneslfpt askqcvktik ekfeelderw kalpqivdkr
     1741 inflqslvae hgqfdelllr fsdwikqfla elqatseist adqqlaashn knhsmevesk
     1801 kqelqilkel veklgsfssp edqqtlqgkt edcfqifqea sqitsqrqea ldqlrmfldl
     1861 hsavsgvlhq lrqtvektgn mdkakselle kelngvikdl nklesdaisl dgsltkaqyh
     1921 lkhsisgqrt scramvdnlg veleavqnll gtkqseaeal galqrsfmer keqllksied
     1981 teekadkegl kettlqalqq rlrvfnqlde elnshqhelq wlmdkakqia qkditlapes
     2041 dkeinrlesl wkdtkkaiqe kkeqscvlid lmkeyqslks tvmkviesan sasvtksiwk
     2101 dhedvrrils kheaakndls dkqkdldtft nkgkhllael krvhncdsta lktdmnsvvd
     2161 kwldvserld enidrlsvsv slwddilktg deldgwcnkc isqlneginn fsnsqrmell
     2221 lkdfqsevkn kelkleqlss kiselkelth sqeppadlqf iesdlrqkle hakdisetak
     2281 etlkdfttqk mqlqkligqm tdwltqveet llscarnldp ealnklketq kdlqlqqssi
     2341 dstretlnsl crkyhsvele alggtvtlli kkyeavnllc srtqarmqes lekhflysmq
     2401 efqewfsgvk aavkessdrs gdskaieakl hdlqgvldsi segqkkldaa ckegeslygc
     2461 lpkpvvshiq eqiaksnqnf qefliqclnd kkaleacash lgnfedqykk lalwmhdmee
     2521 ristealgen kqlvsekkke vqkvekflee llnsrdsfdq lsqmaqalne eghgagrevr
     2581 lasqhltsyq nmvktvkekl rtcqlalqeh ltfeealqsm wswvkevqdk lassqstfgs
     2641 katlerrltq iqeilllkgd gevklnmaig kgeqalkssn eegqkviqte lqtlkdvwnd
     2701 vistsvnwqs cldsiisqwn dylerknqle qwlenldhkv eqplepqigl kekfaqldhf
     2761 qaivseiedh sgdlqqliek avelsektgd dsfgdaaqee lktqfnditt vakekmrkve
     2821 divkdhllyl davheftdwl hsakeelhrw sdasgdtpti qkklakinel vesrqsgagr
     2881 lsrvealapa akrgttaggc qllaaemqal qadwrqwees arrsqgglre llsrmalser
     2941 efaaqaarle eaaqrlagql aawarglapa dsrstdaevv eswrkeketl dalvkseqmt
     3001 deiktqlndl crfsrdlsth sskvsglike ynslclqask gcqskeqilq qrfrtafrdf
     3061 qqwlvnarvt takcfdvpqn iseasaslqk iqeflsesen gqqklnlvas kgellcsvlp
     3121 kekaeviqdk saaakedwkn fittlhqkks aleslkiqmk dfeataeplq ewltttektv
     3181 qgsssrlhdl pskrreqqkl qsvleeisch ehqlnrlkek aqqlweeqav sksfmrrvsq
     3241 lssqyltlsn ltkekvsrmd rivaehqqfs qsikdlqdwv adavhmldsy chptadksvl
     3301 dsrmlklegl lavkqekevq mkivltrges vlqntslegv pviegqlqnl kdswasllst
     3361 ciqcksqleg alskwtsyqe dvnqfsrwmd kvetsmnase rqyaelrekt aalskaklln
     3421 eevlshnsll etievkgkgm aehyiaqlel qdlqerykfl kertkeavik aeglltlhqe
     3481 yqrnlkafev wlekeqekld clshldgdaq eqeatlrdlq elqvhcaegq allnaavhar
     3541 eevipwgipq iedraleslr qdwqvyqhrl searsqlnat vsklrlmekk fqkvndwltn
     3601 leekvairtg rrsgratkem qlqlmkkche ditvykddie evgvlaqqil eenltasrmg
     3661 sqatqltsry qtlllhvleq vkfleeeirc meeselsfsa ytnwygatnk nfknvitkfd
     3721 mvdktvmekk vqklevllsd mdighsllks arekgeraik ymeenevdql rkeigdhveq
     3781 leelagsirk ehmtsekclq lvkefsdkyk aqtqwvmeyq ailhapvepk selyekkaql
     3841 skyksiqqtv lshepsiksv iekgealcdl vndvalknni qdlqssyqel csktkacvet
     3901 levrvkehed ynsdlqegek wllhmssrla spdlmesnnl eiitqqlanq kaimeeiagf
     3961 edrlnslksk gdylisqcse hlqakfkqni qshlqgtrds ysaicstaqr vyqtlehelq
     4021 khvnhqdtlq qcqtwlstvq selkpttwta fsladavkqv khfralqeqa ntyldllcsm
     4081 cdlsdatvks taadiqqtkq tieqqimhsq ylsqgweeik qlkaelwiyf qdadqqlqnl
     4141 krrraeleln iaqnmvlqvk efsqklqskq saltsvteki nkltqgqesp ehkeigelsn
     4201 qwldlclqah nllmqreedl qrtrdyhdrm nvievflekl tkewdnlars daestnvhle
     4261 alqklaialq errfaledlk dqkqkmiehl nlddkelike qfshfeqrwt qledlvkrki
     4321 qvsvstleel slvhskfqel mewaeeqqps vsealkqspp pdmaqsllmd hlsicselea
     4381 kqlvlkmlvk dadrvmtnlg lnerqelqkt vsdaqhhvac lsdlvgqrrk hlnkalsekt
     4441 qflmavfeat nqihqhekkv mfpehicllp edvnkqirtc kntqanlkay qnevtglwaq
     4501 grdlmkeatn qeksevlgkl qelqnvydtv lqkcnqrlle leknivsrky fkedldkach
     4561 wlkqadivtf pevnvmnsnt elysqlakyq qileqspeye nlllslqrdg qevlpslnev
     4621 dhsyldekln slpqqfntvt alakeklykv qeaiyarkey aslieltska lteledqfin
     4681 mdkapaavsa keavslqqay rdlldeatsl aaavdelnqk keafrstgqp wqpdemlkla
     4741 tlyhklkrqi eqkisllddt ieacqehekm cmqfeaqlet vkkeqakvne etlpveeklk
     4801 iyhslmgslq dsesllkrit ehlealssqv dssayettnh qvkawqeklk slhsaivdtv
     4861 mecenrlvqs idfkteicrs lewlrwvkte lngtlsldlk lqniqeeirk vqihqeevqs
     4921 slrimnalsn kekerymkak elipadlent laelaeldge vqeaihvrqa tlnkayslcq
     4981 ryyqvmqian dwledaqefl qlarngldve nseenlrnhv effstesqfn dhlkvlqglv
     5041 seiepflqat aseqlvqnva aleekakgme qeaktqqeql qrcasewqey qtsrqkviev
     5101 mndaekklse fsvakaassh eaeeklqthk tlvsivnsfh ekitaleeka sqlekisnda
     5161 skasisrsmt tvwqrwtrlr nvaqeqekil edavqewkvf ndkiqkatia idqlqgrlpe
     5221 ssvekaskte llelldyhgs fllevdhqls slgllkqhav smlqnvevkp psqkelpvmq
     5281 eikamqdrch nmqqkvkkgm kmvkqelker eeveaeiniv kswiqetkey llspdaevdi
     5341 qlqelqslfg evtthsqave klaeqqqnky lglytilpse lslhlaevgl alvtvqdqiq
     5401 tkeretqqik tlnqefdqki qgianelnti lsklkkktnd iaqakleqki lgdeldscni
     5461 klleldasvq dfaeqnlpla kqlsnrigkl talhqqtirq aeyraaklsq aashleeyne
     5521 mlefilkwie kanilvhgsi twnsssqlrd qfkayqsild esgeihgdle amseridyla
     5581 svyctegmsq qvlelgrrte elqqvikvql pnlqdaakdm kkfeielral qaaleqaqat
     5641 ltspelghls lkeqlshrqh llsemeslkp kvqavqdcqs alripeevvt slpmchsalr
     5701 lqeeasrlqh taiqqcnimq eavvqyeqye qemkhlqqmi esahreiqnk piatsniqel
     5761 qvqisrneel aqkikgyqeq iaslnskckm ltmkakhatm lltvtevegl segmeeldsd
     5821 llpahpthps vvmmtagrch tllspvtees geegtnseis sppacrspsp vantdasvnq
     5881 diayyqalsa eqlqteaaki qpstsatqef yepglessas aklddlqrsw etlknvisek
     5941 qrtlyealer qqkyqdtlqs istkmettem klneslepak spesqmaehq almdeilmlq
     6001 eeiselqtsl aqelvsepld aegadqmalq stltvlaerm atirmkasgk rqlleeklne
     6061 qleeqrqeqa lqryrceade ldhwllstra sldtallpae epmdmeaqlv dcqnmlveie
     6121 qkvvalsels vhnenllmeg kahtkdeaeq lavklrtlkg sllelqrvlh dkqinirqgs
     6181 lqekeesdld fissqspsvq ewlaqarttr sqqqqstlqq qkeleqelee qknllrsvac
     6241 rggeiltqqs steglsisek pdalseelvl egekpsseeq mkrkweslyq efstkqrllq
     6301 kalekeqlql ysrpnrlipg mplykeetqd edkslvspvl velnqafedv sseagrveet
     6361 lhleqklydg vtatsvwldg veeqvfvata llpeeetety lckqeslake ikditeevdk
     6421 nknlfaqifp essdkrviie dtldcllrrl tllesvvnqr cnqmkgrlqq iitfkndlkl
     6481 mftsvadnky lllqklaeaa drpeteqmqv ilqaeeglke ldaginelkk ridklhvdqp
     6541 svqelskiqd kydellmiig srrsdlnqnm alkrqyeral qdladlvetg qekmagdqkm
     6601 ivsskeevqs llekhkeyfq gleshmilte tlfrkmssla llketqshse imtrasavlk
     6661 lahkrgvele yiletwmhld edyqeltrql esvegniptv glveetedrl rdritlfqhl
     6721 rsnlteyqpk lyqvlddgkr llfsvscsel egqlnqlger wlsntskvtk elhrletilk
     6781 hwtryqsesn eltqwlqsak erlefwsqqs ltvpqeletv rdhlnsflef skevdtkssq
     6841 kssvlstgnq llrlkkvdta alraglshie tqwtelltqi pavqeklhql qmdkipsrha
     6901 itevmswisl menviqqdee niknvvgqka iqgyvqkykg fkidlnckql tvdfvnqsvl
     6961 qissqdvesk rsdktdfaeq lgamnrrwqi lqglitekiq lleslqeswt eyennvqclk
     7021 twfetqekkl kqqqnigdqa svqnalkdcq eleesirtke kevenveqsg lslvqnkkee
     7081 vasavmntlq einhswanld hmvsqlkill qsvldqwsiy kvayeelngy ltearyslsr
     7141 cylltgslea vkvqvdklqs lqdelekqen slqkfgsvtn ellkechppv tetltntlke
     7201 vnmrwnnllq evaerlrasr allqlwqryk dchqqcssmv hqreeqtnel lktatskdia
     7261 ddevtswird cndvltdlkt aqeslvvlqe lgeelksqve asaaaaiqsd hlslsqnlst
     7321 leqalrkqqa alqagvldyq tfaknlevle twiteaeetl keqdpshssd vsaiqsrmeq
     7381 lksqmlkfss mapdldrlne lgyrlplndk eikrmqnlnr hwslissqtt erfsklqsfl
     7441 lqqqtflekc gtwmdllvqt eqklavevsg nyqrlleqqr ehelfqaemf srqqilhsii
     7501 sdgqhlleqg qvddrdefnl nltllsnqwq gvirraqqmr giidsrihqw qryremaekl
     7561 rkwllemscq pvtelgsapi plpqarvlld evqlkekvll rqqgsyiltv eagkqlllsa
     7621 dsgaeavlqa elteiqerwk ivstqleqqk kqlalllkdw ekcekgigds leklrsfkkk
     7681 lsqplpdhhd elhaeqirck elenavegwt ddlanlsllk etlsvyisad disilserie
     7741 llhrqweelc hqvslrrqqv serlnewavf seknkelcew ltqmeskvsq ngdilieemi
     7801 eklkkdyqee iavaqknkiq lqqmgerlak asheskasei eyklgkindr wqhlldliaa
     7861 rvkklketlv avqqldknms slrswlahie selskpivye tcdseeiqrk lneqqelqrd
     7921 iekhstgvas vlnlcevllh dcdacateae cdsiqqatrn ldrrwrnica msmerrlkie
     7981 etwrlwqkfl ddysrfeewl ktsertaafp sssgvlytva keelkkfeaf qrqvhesltq
     8041 lelinkqyrr larenrtdsd gslkqmvheg nqrwdnlqkr vtsilrrlkh figqreefet
     8101 ardsilvwlt emdlqltnie hfsecdvqak ikqlkafqqe islnnnkieq iivqgeqlie
     8161 ksepldaavi eeeldelrry cqevfgrver yhkklirlpl tddehdlsdr evdldesadl
     8221 sdirwhdksa dsvlsphpss nlslplsqpl rsersgrdtp asvdsiplew dhdydlsrdl
     8281 etavsrvlhs eedggqekdf ylrgaagiad veipetleay vtltenalkn isgepgalea
     8341 hirqldkald tsrfqiqqte niirsktptg peldstykgy mkllgecsgs idsvrrlgyk
     8401 lkeeeekfsg linmnstetq tagvierwel iqaqalskel rmkqnlqqwq qfnsdlnsiw
     8461 awlgeteeel eklhrldlst diqtielrik klkelqkaid nrkaiilsin lcsseftqsd
     8521 seeskklqer lsqmnvrweh vcsmiedwrs slqdaliqcq dfhelshgll lwlenidrrk
     8581 neivpinpnl dseilqdhhr llmqirrell esqlkvaslq dmscqllvna egkdcleake
     8641 kvhvignrlk lllkevtrhi kdlekildis ssqlelssws sdeldtsgsv spvsgrstps
     8701 rqrtprgkcs lsqpgpsvss phsrstrggs gsspseagpv wrcpsfflrv lraalplqll
     8761 lllliglacl vpmteedysc amannfarsf hpmlkymngp ppl
//
LOCUS       XP_041326022            8803 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326022
VERSION     XP_041326022.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470088.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8803
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8803
                     /product="nesprin-1 isoform X1"
                     /calculated_mol_wt=1011354
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          1263..2063
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1773..>2484
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2203..2959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3049..3255
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3155..3160
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3161..3372
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3263..3268
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3367..4031
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3804..4019
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3904..3909
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4117..>4348
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4329..4542
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4435..4436,4438..4441)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4581..5220
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5041..5784
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5950..6165
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(6057..6059,6071..6073)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6279..7092
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          6781..7004
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6891..6896
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6899..7114
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7005..7010
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7019..7215
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7113..7118
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7123..7334
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7222..7227
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7338..7540
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7439..7444
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7442..7653
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7546..7551
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7652..7869
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7764..7769
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7766..7981
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7868..7873
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7985..8195
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8091..8096
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8448..8667
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8555..8560
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8771..8802
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8803
                     /gene="SYNE1"
                     /coded_by="XM_041470088.1:570..26981"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qnmvrkagew
      901 rknieansrl mkkfeesrae lekviqianc clkekgnpee llrkhseffn qldqrvlnaf
      961 lkacdeltdi lpeqeqhslq eavrklhrqw kdlqteapyh lihlkievqk skflvtveec
     1021 kaelarqnkv lsregnermi kehmlffgdk gsyhlcekrl qrmeelcqkl pvsdpvrgtl
     1081 essqrilkdl ksqidstymk ltehsdtwkg yksrfselan wissterelk kikenvndta
     1141 kykqckasvg eirkhihkhg enhswlksrl avltslcpdl eaketedelc klssdfkrll
     1201 dllaeientl gavgdcvqyk eevksaieel innskevqae aekildtesl lqaqqlllhh
     1261 qqrtrrlrak rqdvqkqisq akrlqieggl pstvredlqk legtlenmqq tmekreeqlq
     1321 vtinkweqfe rdketvvkyl nqassvleri lnfsslesls seldqtkels kqteamavqa
     1381 enlvknssei qlgsknkqsl qhqaksiqeq vkkmevtlee diksmemvkn kwdhfgnnfe
     1441 alsnwiaeqe keletletss ssldiqisqi kvinkeidgk itgisnleee akafsqfvts
     1501 gerahikakl tqvkryweel rdhaqrlegt itgnasaqqk yeeslkqvqq svsefeakla
     1561 epltscssaa atyaalqdct dlchtvekls nplaslsagv rkvankekaa qkvtalqqky
     1621 ekvlesakek qnllenllaq wqkqekelsa flawlegcea vgrpaepyvs adriklegel
     1681 lalqdlradi eshtcvyesl lqlneslfpt askqcvktik ekfeelderw kalpqivdkr
     1741 inflqslvae hgqfdelllr fsdwikqfla elqatseist adqqlaashn knhsmevesk
     1801 kqelqilkel veklgsfssp edqqtlqgkt edcfqifqea sqitsqrqea ldqlrmfldl
     1861 hsavsgvlhq lrqtvektgn mdkakselle kelngvikdl nklesdaisl dgsltkaqyh
     1921 lkhsisgqrt scramvdnlg veleavqnll gtkqseaeal galqrsfmer keqllksied
     1981 teekadkegl kettlqalqq rlrvfnqlde elnshqhelq wlmdkakqia qkditlapes
     2041 dkeinrlesl wkdtkkaiqe kkeqscvlid lmkeyqslks tvmkviesan sasvtksiwk
     2101 dhedvrrils kheaakndls dkqkdldtft nkgkhllael krvhncdsta lktdmnsvvd
     2161 kwldvserld enidrlsvsv slwddilktg deldgwcnkc isqlneginn fsnsqrmell
     2221 lkdfqsevkn kelkleqlss kiselkelth sqeppadlqf iesdlrqkle hakdisetak
     2281 etlkdfttqk mqlqkligqm tdwltqveet llscarnldp ealnklketq kdlqlqqssi
     2341 dstretlnsl crkyhsvele alggtvtlli kkyeavnllc srtqarmqes lekhflysmq
     2401 efqewfsgvk aavkessdrs gdskaieakl hdlqgvldsi segqkkldaa ckegeslygc
     2461 lpkpvvshiq eqiaksnqnf qefliqclnd kkaleacash lgnfedqykk lalwmhdmee
     2521 ristealgen kqlvsekkke vqkvekflee llnsrdsfdq lsqmaqalne eghgagrevr
     2581 lasqhltsyq nmvktvkekl rtcqlalqeh ltfeealqsm wswvkevqdk lassqstfgs
     2641 katlerrltq iqeilllkgd gevklnmaig kgeqalkssn eegqkviqte lqtlkdvwnd
     2701 vistsvnwqs cldsiisqwn dylerknqle qwlenldhkv eqplepqigl kekfaqldhf
     2761 qaivseiedh sgdlqqliek avelsektgd dsfgdaaqee lktqfnditt vakekmrkve
     2821 divkdhllyl davheftdwl hsakeelhrw sdasgdtpti qkklakinel vesrqsgagr
     2881 lsrvealapa akrgttaggc qllaaemqal qadwrqwees arrsqgglre llsrmalser
     2941 efaaqaarle eaaqrlagql aawarglapa dsrstdaevv eswrkeketl dalvkseqmt
     3001 deiktqlndl crfsrdlsth sskvsglike ynslclqask gcqskeqilq qrfrtafrdf
     3061 qqwlvnarvt takcfdvpqn iseasaslqk iqeflsesen gqqklnlvas kgellcsvlp
     3121 kekaeviqdk saaakedwkn fittlhqkks aleslkiqmk dfeataeplq ewltttektv
     3181 qgsssrlhdl pskrreqqkl qsvleeisch ehqlnrlkek aqqlweeqav sksfmrrvsq
     3241 lssqyltlsn ltkekvsrmd rivaehqqfs qsikdlqdwv adavhmldsy chptadksvl
     3301 dsrmlklegl lavkqekevq mkivltrges vlqntslegv pviegqlqnl kdswasllst
     3361 ciqcksqleg alskwtsyqe dvnqfsrwmd kvetsmnase rqyaelrekt aalskaklln
     3421 eevlshnsll etievkgkgm aehyiaqlel qdlqerykfl kertkeavik aeglltlhqe
     3481 yqrnlkafev wlekeqekld clshldgdaq eqeatlrdlq elqvhcaegq allnaavhar
     3541 eevipwgipq iedraleslr qdwqvyqhrl searsqlnat vsklrlmekk fqkvndwltn
     3601 leekvairtg rrsgratkem qlqlmkkche ditvykddie evgvlaqqil eenltasrmg
     3661 sqatqltsry qtlllhvleq vkfleeeirc meeselsfsa ytnwygatnk nfknvitkfd
     3721 mvdktvmekk vqklevllsd mdighsllks arekgeraik ymeenevdql rkeigdhveq
     3781 leelagsirk ehmtsekclq lvkefsdkyk aqtqwvmeyq ailhapvepk selyekkaql
     3841 skyksiqqtv lshepsiksv iekgealcdl vndvalknni qdlqssyqel csktkacvet
     3901 levrvkehed ynsdlqegek wllhmssrla spdlmesnnl eiitqqlanq kaimeeiagf
     3961 edrlnslksk gdylisqcse hlqakfkqni qshlqgtrds ysaicstaqr vyqtlehelq
     4021 khvnhqdtlq qcqtwlstvq selkpttwta fsladavkqv khfralqeqa ntyldllcsm
     4081 cdlsdatvks taadiqqtkq tieqqimhsq ylsqgweeik qlkaelwiyf qdadqqlqnl
     4141 krrraeleln iaqnmvlqvk efsqklqskq saltsvteki nkltqgqesp ehkeigelsn
     4201 qwldlclqah nllmqreedl qrtrdyhdrm nvievflekl tkewdnlars daestnvhle
     4261 alqklaialq errfaledlk dqkqkmiehl nlddkelike qfshfeqrwt qledlvkrki
     4321 qvsvstleel slvhskfqel mewaeeqqps vsealkqspp pdmaqsllmd hlsicselea
     4381 kqlvlkmlvk dadrvmtnlg lnerqelqkt vsdaqhhvac lsdlvgqrrk hlnkalsekt
     4441 qflmavfeat nqihqhekkv mfpehicllp edvnkqirtc kntqanlkay qnevtglwaq
     4501 grdlmkeatn qeksevlgkl qelqnvydtv lqkcnqrlle leknivsrky fkedldkach
     4561 wlkqadivtf pevnvmnsnt elysqlakyq qileqspeye nlllslqrdg qevlpslnev
     4621 dhsyldekln slpqqfntvt alakeklykv qeaiyarkey aslieltska lteledqfin
     4681 mdkapaavsa keavslqqay rdlldeatsl aaavdelnqk keafrstgqp wqpdemlkla
     4741 tlyhklkrqi eqkisllddt ieacqehekm cmqfeaqlet vkkeqakvne etlpveeklk
     4801 iyhslmgslq dsesllkrit ehlealssqv dssayettnh qvkawqeklk slhsaivdtv
     4861 mecenrlvqs idfkteicrs lewlrwvkte lngtlsldlk lqniqeeirk vqihqeevqs
     4921 slrimnalsn kekerymkak elipadlent laelaeldge vqeaihvrqa tlnkayslcq
     4981 ryyqvmqian dwledaqefl qlarngldve nseenlrnhv effstesqfn dhlkvlqglv
     5041 seiepflqat aseqlvqnva aleekakgme qeaktqqeql qrcasewqey qtsrqkviev
     5101 mndaekklse fsvakaassh eaeeklqthk tlvsivnsfh ekitaleeka sqlekisnda
     5161 skasisrsmt tvwqrwtrlr nvaqeqekil edavqewkvf ndkiqkatia idqlqgrlpe
     5221 ssvekaskte llelldyhgs fllevdhqls slgllkqhav smlqnvevkp psqkelpvmq
     5281 eikamqdrch nmqqkvkkgm kmvkqelker eeveaeiniv kswiqetkey llspdaevdi
     5341 qlqelqslfg evtthsqave klaeqqqnky lglytilpse lslhlaevgl alvtvqdqiq
     5401 tkeretqqik tlnqefdqki qgianelnti lsklkkktnd iaqakleqki lgdeldscni
     5461 klleldasvq dfaeqnlpla kqlsnrigkl talhqqtirq aeyraaklsq aashleeyne
     5521 mlefilkwie kanilvhgsi twnsssqlrd qfkayqsild esgeihgdle amseridyla
     5581 svyctegmsq qvlelgrrte elqqvikvql pnlqdaakdm kkfeielral qaaleqaqat
     5641 ltspelghls lkeqlshrqh llsemeslkp kvqavqdcqs alripeevvt slpmchsalr
     5701 lqeeasrlqh taiqqcnimq eavvqyeqye qemkhlqqmi esahreiqnk piatsniqel
     5761 qvqisrneel aqkikgyqeq iaslnskckm ltmkakhatm lltvtevegl segmeeldsd
     5821 llpahpthps vvmmtagrch tllspvtees geegtnseis sppacrspsp vantdasvnq
     5881 diayyqalsa eqlqteaaki qpstsatqef yepglessas aklddlqrsw etlknvisek
     5941 qrtlyealer qqkyqdtlqs istkmettem klneslepak spesqmaehq almdeilmlq
     6001 eeiselqtsl aqelvsepld aegadqmalq stltvlaerm atirmkasgk rqlleeklne
     6061 qleeqrqeqa lqryrceade ldhwllstra sldtallpae epmdmeaqlv dcqnmlveie
     6121 qkvvalsels vhnenllmeg kahtkdeaeq lavklrtlkg sllelqrvlh dkqinirqgs
     6181 lqekeesdld fissqspsvq ewlaqarttr sqqqqstlqq qkeleqelee qknllrsvac
     6241 rggeiltqqs steglsisek pdalseelvl egekpsseeq mkrkweslyq efstkqrllq
     6301 kalekeqlql ysrpnrlipg mplykeetqd edkslvspvl velnqafedv sseagrveet
     6361 lhleqklydg vtatsvwldg veeqvfvata llpeeetety lckqeslake ikditeevdk
     6421 nknlfaqifp essdkrviie dtldcllrrl tllesvvnqr cnqmkgrlqq iitfkndlkl
     6481 mftsvadnky lllqklaeaa drpeteqmqv ilqaeeglke ldaginelkk ridklhvdqp
     6541 svqelskiqd kydellmiig srrsdlnqnm alkrqyeral qdladlvetg qekmagdqkm
     6601 ivsskeevqs llekhkeyfq gleshmilte tlfrkmssla llketqshse imtrasavlk
     6661 lahkrgvele yiletwmhld edyqeltrql esvegniptv glveetedrl rdritlfqhl
     6721 rsnlteyqpk lyqvlddgkr llfsvscsel egqlnqlger wlsntskvtk elhrletilk
     6781 hwtryqsesn eltqwlqsak erlefwsqqs ltvpqeletv rdhlnsflef skevdtkssq
     6841 kssvlstgnq llrlkkvdta alraglshie tqwtelltqi pavqeklhql qmdkipsrha
     6901 itevmswisl menviqqdee niknvvgqka iqgyvqkykg fkidlnckql tvdfvnqsvl
     6961 qissqdvesk rsdktdfaeq lgamnrrwqi lqglitekiq lleslqeswt eyennvqclk
     7021 twfetqekkl kqqqnigdqa svqnalkdcq eleesirtke kevenveqsg lslvqnkkee
     7081 vasavmntlq einhswanld hmvsqlkill qsvldqwsiy kvayeelngy ltearyslsr
     7141 cylltgslea vkvqvdklqs lqdelekqen slqkfgsvtn ellkechppv tetltntlke
     7201 vnmrwnnllq evaerlrasr allqlwqryk dchqqcssmv hqreeqtnel lktatskdia
     7261 ddevtswird cndvltdlkt aqeslvvlqe lgeelksqve asaaaaiqsd hlslsqnlst
     7321 leqalrkqqa alqagvldyq tfaknlevle twiteaeetl keqdpshssd vsaiqsrmeq
     7381 lksqmlkfss mapdldrlne lgyrlplndk eikrmqnlnr hwslissqtt erfsklqsfl
     7441 lqqqtflekc gtwmdllvqt eqklavevsg nyqrlleqqr ehelfqaemf srqqilhsii
     7501 sdgqhlleqg qvddrdefnl nltllsnqwq gvirraqqmr giidsrihqw qryremaekl
     7561 rkwllemscq pvtelgsapi plpqarvlld evqlkekvll rqqgsyiltv eagkqlllsa
     7621 dsgaeavlqa elteiqerwk ivstqleqqk kqlalllkdw ekcekgigds leklrsfkkk
     7681 lsqplpdhhd elhaeqirck elenavegwt ddlanlsllk etlsvyisad disilserie
     7741 llhrqweelc hqvslrrqqv serlnewavf seknkelcew ltqmeskvsq ngdilieemi
     7801 eklkkdyqee iavaqknkiq lqqmgerlak asheskasei eyklgkindr wqhlldliaa
     7861 rvkklketlv avqqldknms slrswlahie selskpivye tcdseeiqrk lneqqelqrd
     7921 iekhstgvas vlnlcevllh dcdacateae cdsiqqatrn ldrrwrnica msmerrlkie
     7981 etwrlwqkfl ddysrfeewl ktsertaafp sssgvlytva keelkkfeaf qrqvhesltq
     8041 lelinkqyrr larenrtdsd gslkqmvheg nqrwdnlqkr vtsilrrlkh figqreefet
     8101 ardsilvwlt emdlqltnie hfsecdvqak ikqlkafqqe islnnnkieq iivqgeqlie
     8161 ksepldaavi eeeldelrry cqevfgrver yhkklirlpl tddehdlsdr evdldesadl
     8221 sdirwhdksa dsvlsphpss nlslplsqpl rsersgrdtp asvdsiplew dhdydlsrdl
     8281 etavsrvlhs eedggqekdf ylrgaagiad veipetleay vtltenalkn isgepgalea
     8341 hirqldkald tsrfqiqqte niirsktptg peldstykgy mkllgecsgs idsvrrlgyk
     8401 lkeeeekfsg linmnstetq tagvierwel iqaqalskel rmkqnlqqwq qfnsdlnsiw
     8461 awlgeteeel eklhrldlst diqtielrik klkelqkaid nrkaiilsin lcsseftqsd
     8521 seeskklqer lsqmnvrweh vcsmiedwrs slqdaliqcq dfhelshgll lwlenidrrk
     8581 neivpinpnl dseilqdhhr llmqirrell esqlkvaslq dmscqllvna egkdcleake
     8641 kvhvignrlk lllkevtrhi kdlekildis ssqlelssws sdeldtsgsv spvsgrstps
     8701 rqrtprgkcs lsqpgpsvss phsrstrggs gsspseagpv wrcpsfflrv lraalplqll
     8761 lllliglacl vpmteedysc amannfarsf hpmlkymngp ppl
//
LOCUS       XP_041326023            8802 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326023
VERSION     XP_041326023.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470089.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8802
                     /product="nesprin-1 isoform X2"
                     /calculated_mol_wt=1011225
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          1263..2063
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1773..>2484
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2203..2959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3049..3255
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3155..3160
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3161..3372
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3263..3268
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3367..4031
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3804..4019
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3904..3909
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4117..>4348
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4329..4542
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4435..4436,4438..4441)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4581..5220
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5041..5784
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5950..6165
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(6057..6059,6071..6073)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6780..7003
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6890..6895
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6898..7113
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7004..7009
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7018..7214
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7112..7117
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7122..7333
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7221..7226
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7337..7539
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7438..7443
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7441..7652
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7545..7550
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7651..7868
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7763..7768
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7765..7980
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7867..7872
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7984..8194
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8090..8095
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8447..8666
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8554..8559
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8770..8801
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8802
                     /gene="SYNE1"
                     /coded_by="XM_041470089.1:339..26747"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qnmvrkagew
      901 rknieansrl mkkfeesrae lekviqianc clkekgnpee llrkhseffn qldqrvlnaf
      961 lkacdeltdi lpeqeqhslq eavrklhrqw kdlqteapyh lihlkievqk skflvtveec
     1021 kaelarqnkv lsregnermi kehmlffgdk gsyhlcekrl qrmeelcqkl pvsdpvrgtl
     1081 essqrilkdl ksqidstymk ltehsdtwkg yksrfselan wissterelk kikenvndta
     1141 kykqckasvg eirkhihkhg enhswlksrl avltslcpdl eaketedelc klssdfkrll
     1201 dllaeientl gavgdcvqyk eevksaieel innskevqae aekildtesl lqaqqlllhh
     1261 qqrtrrlrak rqdvqkqisq akrlqieggl pstvredlqk legtlenmqq tmekreeqlq
     1321 vtinkweqfe rdketvvkyl nqassvleri lnfsslesls seldqtkels kqteamavqa
     1381 enlvknssei qlgsknkqsl qhqaksiqeq vkkmevtlee diksmemvkn kwdhfgnnfe
     1441 alsnwiaeqe keletletss ssldiqisqi kvinkeidgk itgisnleee akafsqfvts
     1501 gerahikakl tqvkryweel rdhaqrlegt itgnasaqqk yeeslkqvqq svsefeakla
     1561 epltscssaa atyaalqdct dlchtvekls nplaslsagv rkvankekaa qkvtalqqky
     1621 ekvlesakek qnllenllaq wqkqekelsa flawlegcea vgrpaepyvs adriklegel
     1681 lalqdlradi eshtcvyesl lqlneslfpt askqcvktik ekfeelderw kalpqivdkr
     1741 inflqslvae hgqfdelllr fsdwikqfla elqatseist adqqlaashn knhsmevesk
     1801 kqelqilkel veklgsfssp edqqtlqgkt edcfqifqea sqitsqrqea ldqlrmfldl
     1861 hsavsgvlhq lrqtvektgn mdkakselle kelngvikdl nklesdaisl dgsltkaqyh
     1921 lkhsisgqrt scramvdnlg veleavqnll gtkqseaeal galqrsfmer keqllksied
     1981 teekadkegl kettlqalqq rlrvfnqlde elnshqhelq wlmdkakqia qkditlapes
     2041 dkeinrlesl wkdtkkaiqe kkeqscvlid lmkeyqslks tvmkviesan sasvtksiwk
     2101 dhedvrrils kheaakndls dkqkdldtft nkgkhllael krvhncdsta lktdmnsvvd
     2161 kwldvserld enidrlsvsv slwddilktg deldgwcnkc isqlneginn fsnsqrmell
     2221 lkdfqsevkn kelkleqlss kiselkelth sqeppadlqf iesdlrqkle hakdisetak
     2281 etlkdfttqk mqlqkligqm tdwltqveet llscarnldp ealnklketq kdlqlqqssi
     2341 dstretlnsl crkyhsvele alggtvtlli kkyeavnllc srtqarmqes lekhflysmq
     2401 efqewfsgvk aavkessdrs gdskaieakl hdlqgvldsi segqkkldaa ckegeslygc
     2461 lpkpvvshiq eqiaksnqnf qefliqclnd kkaleacash lgnfedqykk lalwmhdmee
     2521 ristealgen kqlvsekkke vqkvekflee llnsrdsfdq lsqmaqalne eghgagrevr
     2581 lasqhltsyq nmvktvkekl rtcqlalqeh ltfeealqsm wswvkevqdk lassqstfgs
     2641 katlerrltq iqeilllkgd gevklnmaig kgeqalkssn eegqkviqte lqtlkdvwnd
     2701 vistsvnwqs cldsiisqwn dylerknqle qwlenldhkv eqplepqigl kekfaqldhf
     2761 qaivseiedh sgdlqqliek avelsektgd dsfgdaaqee lktqfnditt vakekmrkve
     2821 divkdhllyl davheftdwl hsakeelhrw sdasgdtpti qkklakinel vesrqsgagr
     2881 lsrvealapa akrgttaggc qllaaemqal qadwrqwees arrsqgglre llsrmalser
     2941 efaaqaarle eaaqrlagql aawarglapa dsrstdaevv eswrkeketl dalvkseqmt
     3001 deiktqlndl crfsrdlsth sskvsglike ynslclqask gcqskeqilq qrfrtafrdf
     3061 qqwlvnarvt takcfdvpqn iseasaslqk iqeflsesen gqqklnlvas kgellcsvlp
     3121 kekaeviqdk saaakedwkn fittlhqkks aleslkiqmk dfeataeplq ewltttektv
     3181 qgsssrlhdl pskrreqqkl qsvleeisch ehqlnrlkek aqqlweeqav sksfmrrvsq
     3241 lssqyltlsn ltkekvsrmd rivaehqqfs qsikdlqdwv adavhmldsy chptadksvl
     3301 dsrmlklegl lavkqekevq mkivltrges vlqntslegv pviegqlqnl kdswasllst
     3361 ciqcksqleg alskwtsyqe dvnqfsrwmd kvetsmnase rqyaelrekt aalskaklln
     3421 eevlshnsll etievkgkgm aehyiaqlel qdlqerykfl kertkeavik aeglltlhqe
     3481 yqrnlkafev wlekeqekld clshldgdaq eqeatlrdlq elqvhcaegq allnaavhar
     3541 eevipwgipq iedraleslr qdwqvyqhrl searsqlnat vsklrlmekk fqkvndwltn
     3601 leekvairtg rrsgratkem qlqlmkkche ditvykddie evgvlaqqil eenltasrmg
     3661 sqatqltsry qtlllhvleq vkfleeeirc meeselsfsa ytnwygatnk nfknvitkfd
     3721 mvdktvmekk vqklevllsd mdighsllks arekgeraik ymeenevdql rkeigdhveq
     3781 leelagsirk ehmtsekclq lvkefsdkyk aqtqwvmeyq ailhapvepk selyekkaql
     3841 skyksiqqtv lshepsiksv iekgealcdl vndvalknni qdlqssyqel csktkacvet
     3901 levrvkehed ynsdlqegek wllhmssrla spdlmesnnl eiitqqlanq kaimeeiagf
     3961 edrlnslksk gdylisqcse hlqakfkqni qshlqgtrds ysaicstaqr vyqtlehelq
     4021 khvnhqdtlq qcqtwlstvq selkpttwta fsladavkqv khfralqeqa ntyldllcsm
     4081 cdlsdatvks taadiqqtkq tieqqimhsq ylsqgweeik qlkaelwiyf qdadqqlqnl
     4141 krrraeleln iaqnmvlqvk efsqklqskq saltsvteki nkltqgqesp ehkeigelsn
     4201 qwldlclqah nllmqreedl qrtrdyhdrm nvievflekl tkewdnlars daestnvhle
     4261 alqklaialq errfaledlk dqkqkmiehl nlddkelike qfshfeqrwt qledlvkrki
     4321 qvsvstleel slvhskfqel mewaeeqqps vsealkqspp pdmaqsllmd hlsicselea
     4381 kqlvlkmlvk dadrvmtnlg lnerqelqkt vsdaqhhvac lsdlvgqrrk hlnkalsekt
     4441 qflmavfeat nqihqhekkv mfpehicllp edvnkqirtc kntqanlkay qnevtglwaq
     4501 grdlmkeatn qeksevlgkl qelqnvydtv lqkcnqrlle leknivsrky fkedldkach
     4561 wlkqadivtf pevnvmnsnt elysqlakyq qileqspeye nlllslqrdg qevlpslnev
     4621 dhsyldekln slpqqfntvt alakeklykv qeaiyarkey aslieltska lteledqfin
     4681 mdkapaavsa keavslqqay rdlldeatsl aaavdelnqk keafrstgqp wqpdemlkla
     4741 tlyhklkrqi eqkisllddt ieacqehekm cmqfeaqlet vkkeqakvne etlpveeklk
     4801 iyhslmgslq dsesllkrit ehlealssqv dssayettnh qvkawqeklk slhsaivdtv
     4861 mecenrlvqs idfkteicrs lewlrwvkte lngtlsldlk lqniqeeirk vqihqeevqs
     4921 slrimnalsn kekerymkak elipadlent laelaeldge vqeaihvrqa tlnkayslcq
     4981 ryyqvmqian dwledaqefl qlarngldve nseenlrnhv effstesqfn dhlkvlqglv
     5041 seiepflqat aseqlvqnva aleekakgme qeaktqqeql qrcasewqey qtsrqkviev
     5101 mndaekklse fsvakaassh eaeeklqthk tlvsivnsfh ekitaleeka sqlekisnda
     5161 skasisrsmt tvwqrwtrlr nvaqeqekil edavqewkvf ndkiqkatia idqlqgrlpe
     5221 ssvekaskte llelldyhgs fllevdhqls slgllkqhav smlqnvevkp psqkelpvmq
     5281 eikamqdrch nmqqkvkkgm kmvkqelker eeveaeiniv kswiqetkey llspdaevdi
     5341 qlqelqslfg evtthsqave klaeqqqnky lglytilpse lslhlaevgl alvtvqdqiq
     5401 tkeretqqik tlnqefdqki qgianelnti lsklkkktnd iaqakleqki lgdeldscni
     5461 klleldasvq dfaeqnlpla kqlsnrigkl talhqqtirq aeyraaklsq aashleeyne
     5521 mlefilkwie kanilvhgsi twnsssqlrd qfkayqsild esgeihgdle amseridyla
     5581 svyctegmsq qvlelgrrte elqqvikvql pnlqdaakdm kkfeielral qaaleqaqat
     5641 ltspelghls lkeqlshrqh llsemeslkp kvqavqdcqs alripeevvt slpmchsalr
     5701 lqeeasrlqh taiqqcnimq eavvqyeqye qemkhlqqmi esahreiqnk piatsniqel
     5761 qvqisrneel aqkikgyqeq iaslnskckm ltmkakhatm lltvtevegl segmeeldsd
     5821 llpahpthps vvmmtagrch tllspvtees geegtnseis sppacrspsp vantdasvnq
     5881 diayyqalsa eqlqteaaki qpstsatqef yepglessas aklddlqrsw etlknvisek
     5941 qrtlyealer qqkyqdtlqs istkmettem klneslepak spesqmaehq almdeilmlq
     6001 eeiselqtsl aqelvsepld aegadqmalq stltvlaerm atirmkasgk rqlleeklne
     6061 qleeqrqeqa lqryrceade ldhwllstra sldtallpae epmdmeaqlv dcqnmlveie
     6121 qkvvalsels vhnenllmeg kahtkdeaeq lavklrtlkg sllelqrvlh dkqinirqgs
     6181 lqekeesdld fissqspsvq ewlaqarttr sqqqqstlqq qkeleqelee qknllrsvac
     6241 rggeiltqqs steglsisek pdalseelvl egekpsseeq mkrkweslyq efstkqrllq
     6301 kalekeqlly srpnrlipgm plykeetqde dkslvspvlv elnqafedvs seagrveetl
     6361 hleqklydgv tatsvwldgv eeqvfvatal lpeeetetyl ckqeslakei kditeevdkn
     6421 knlfaqifpe ssdkrviied tldcllrrlt llesvvnqrc nqmkgrlqqi itfkndlklm
     6481 ftsvadnkyl llqklaeaad rpeteqmqvi lqaeeglkel daginelkkr idklhvdqps
     6541 vqelskiqdk ydellmiigs rrsdlnqnma lkrqyeralq dladlvetgq ekmagdqkmi
     6601 vsskeevqsl lekhkeyfqg leshmiltet lfrkmsslal lketqshsei mtrasavlkl
     6661 ahkrgveley iletwmhlde dyqeltrqle svegniptvg lveetedrlr dritlfqhlr
     6721 snlteyqpkl yqvlddgkrl lfsvscsele gqlnqlgerw lsntskvtke lhrletilkh
     6781 wtryqsesne ltqwlqsake rlefwsqqsl tvpqeletvr dhlnsflefs kevdtkssqk
     6841 ssvlstgnql lrlkkvdtaa lraglshiet qwtelltqip avqeklhqlq mdkipsrhai
     6901 tevmswislm enviqqdeen iknvvgqkai qgyvqkykgf kidlnckqlt vdfvnqsvlq
     6961 issqdveskr sdktdfaeql gamnrrwqil qglitekiql leslqeswte yennvqclkt
     7021 wfetqekklk qqqnigdqas vqnalkdcqe leesirtkek evenveqsgl slvqnkkeev
     7081 asavmntlqe inhswanldh mvsqlkillq svldqwsiyk vayeelngyl tearyslsrc
     7141 ylltgsleav kvqvdklqsl qdelekqens lqkfgsvtne llkechppvt etltntlkev
     7201 nmrwnnllqe vaerlrasra llqlwqrykd chqqcssmvh qreeqtnell ktatskdiad
     7261 devtswirdc ndvltdlkta qeslvvlqel geelksqvea saaaaiqsdh lslsqnlstl
     7321 eqalrkqqaa lqagvldyqt faknlevlet witeaeetlk eqdpshssdv saiqsrmeql
     7381 ksqmlkfssm apdldrlnel gyrlplndke ikrmqnlnrh wslissqtte rfsklqsfll
     7441 qqqtflekcg twmdllvqte qklavevsgn yqrlleqqre helfqaemfs rqqilhsiis
     7501 dgqhlleqgq vddrdefnln ltllsnqwqg virraqqmrg iidsrihqwq ryremaeklr
     7561 kwllemscqp vtelgsapip lpqarvllde vqlkekvllr qqgsyiltve agkqlllsad
     7621 sgaeavlqae lteiqerwki vstqleqqkk qlalllkdwe kcekgigdsl eklrsfkkkl
     7681 sqplpdhhde lhaeqircke lenavegwtd dlanlsllke tlsvyisadd isilseriel
     7741 lhrqweelch qvslrrqqvs erlnewavfs eknkelcewl tqmeskvsqn gdilieemie
     7801 klkkdyqeei avaqknkiql qqmgerlaka sheskaseie yklgkindrw qhlldliaar
     7861 vkklketlva vqqldknmss lrswlahies elskpivyet cdseeiqrkl neqqelqrdi
     7921 ekhstgvasv lnlcevllhd cdacateaec dsiqqatrnl drrwrnicam smerrlkiee
     7981 twrlwqkfld dysrfeewlk tsertaafps ssgvlytvak eelkkfeafq rqvhesltql
     8041 elinkqyrrl arenrtdsdg slkqmvhegn qrwdnlqkrv tsilrrlkhf igqreefeta
     8101 rdsilvwlte mdlqltnieh fsecdvqaki kqlkafqqei slnnnkieqi ivqgeqliek
     8161 sepldaavie eeldelrryc qevfgrvery hkklirlplt ddehdlsdre vdldesadls
     8221 dirwhdksad svlsphpssn lslplsqplr sersgrdtpa svdsiplewd hdydlsrdle
     8281 tavsrvlhse edggqekdfy lrgaagiadv eipetleayv tltenalkni sgepgaleah
     8341 irqldkaldt srfqiqqten iirsktptgp eldstykgym kllgecsgsi dsvrrlgykl
     8401 keeeekfsgl inmnstetqt agvierweli qaqalskelr mkqnlqqwqq fnsdlnsiwa
     8461 wlgeteeele klhrldlstd iqtielrikk lkelqkaidn rkaiilsinl csseftqsds
     8521 eeskklqerl sqmnvrwehv csmiedwrss lqdaliqcqd fhelshglll wlenidrrkn
     8581 eivpinpnld seilqdhhrl lmqirrelle sqlkvaslqd mscqllvnae gkdcleakek
     8641 vhvignrlkl llkevtrhik dlekildiss sqlelsswss deldtsgsvs pvsgrstpsr
     8701 qrtprgkcsl sqpgpsvssp hsrstrggsg sspseagpvw rcpsfflrvl raalplqlll
     8761 llliglaclv pmteedysca mannfarsfh pmlkymngpp pl
//
LOCUS       XP_041326025            8802 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326025
VERSION     XP_041326025.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470091.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8802
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8802
                     /product="nesprin-1 isoform X3"
                     /calculated_mol_wt=1011225
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          1263..2063
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1773..>2484
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2203..2959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3049..3255
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3155..3160
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3161..3372
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3263..3268
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3367..4031
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3804..4019
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3904..3909
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4117..>4348
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4329..4542
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4435..4436,4438..4441)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4581..5220
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5041..5784
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5950..6165
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(6057..6059,6071..6073)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6278..7091
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          6780..7003
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6890..6895
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6898..7113
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7004..7009
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7018..7214
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7112..7117
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7122..7333
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7221..7226
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7337..7539
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7438..7443
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7441..7652
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7545..7550
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7651..7868
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7763..7768
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7765..7980
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7867..7872
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7984..8194
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8090..8095
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8447..8666
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8554..8559
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8770..8801
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8802
                     /gene="SYNE1"
                     /coded_by="XM_041470091.1:339..26747"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qnmvrkagew
      901 rknieansrl mkkfeesrae lekviqianc clkekgnpee llrkhseffn qldqrvlnaf
      961 lkacdeltdi lpeqeqhslq eavrklhrqw kdlqteapyh lihlkievqk skflvtveec
     1021 kaelarqnkv lsregnermi kehmlffgdk gsyhlcekrl qrmeelcqkl pvsdpvrgtl
     1081 essqrilkdl ksqidstymk ltehsdtwkg yksrfselan wissterelk kikenvndta
     1141 kykqckasvg eirkhihkhg enhswlksrl avltslcpdl eaketedelc klssdfkrll
     1201 dllaeientl gavgdcvqyk eevksaieel innskevqae aekildtesl lqaqqlllhh
     1261 qqrtrrlrak rqdvqkqisq akrlqieggl pstvredlqk legtlenmqq tmekreeqlq
     1321 vtinkweqfe rdketvvkyl nqassvleri lnfsslesls seldqtkels kqteamavqa
     1381 enlvknssei qlgsknkqsl qhqaksiqeq vkkmevtlee diksmemvkn kwdhfgnnfe
     1441 alsnwiaeqe keletletss ssldiqisqi kvinkeidgk itgisnleee akafsqfvts
     1501 gerahikakl tqvkryweel rdhaqrlegt itgnasaqqk yeeslkqvqq svsefeakla
     1561 epltscssaa atyaalqdct dlchtvekls nplaslsagv rkvankekaa qkvtalqqky
     1621 ekvlesakek qnllenllaq wqkqekelsa flawlegcea vgrpaepyvs adriklegel
     1681 lalqdlradi eshtcvyesl lqlneslfpt askqcvktik ekfeelderw kalpqivdkr
     1741 inflqslvae hgqfdelllr fsdwikqfla elqatseist adqqlaashn knhsmevesk
     1801 kqelqilkel veklgsfssp edqqtlqgkt edcfqifqea sqitsqrqea ldqlrmfldl
     1861 hsavsgvlhq lrqtvektgn mdkakselle kelngvikdl nklesdaisl dgsltkaqyh
     1921 lkhsisgqrt scramvdnlg veleavqnll gtkqseaeal galqrsfmer keqllksied
     1981 teekadkegl kettlqalqq rlrvfnqlde elnshqhelq wlmdkakqia qkditlapes
     2041 dkeinrlesl wkdtkkaiqe kkeqscvlid lmkeyqslks tvmkviesan sasvtksiwk
     2101 dhedvrrils kheaakndls dkqkdldtft nkgkhllael krvhncdsta lktdmnsvvd
     2161 kwldvserld enidrlsvsv slwddilktg deldgwcnkc isqlneginn fsnsqrmell
     2221 lkdfqsevkn kelkleqlss kiselkelth sqeppadlqf iesdlrqkle hakdisetak
     2281 etlkdfttqk mqlqkligqm tdwltqveet llscarnldp ealnklketq kdlqlqqssi
     2341 dstretlnsl crkyhsvele alggtvtlli kkyeavnllc srtqarmqes lekhflysmq
     2401 efqewfsgvk aavkessdrs gdskaieakl hdlqgvldsi segqkkldaa ckegeslygc
     2461 lpkpvvshiq eqiaksnqnf qefliqclnd kkaleacash lgnfedqykk lalwmhdmee
     2521 ristealgen kqlvsekkke vqkvekflee llnsrdsfdq lsqmaqalne eghgagrevr
     2581 lasqhltsyq nmvktvkekl rtcqlalqeh ltfeealqsm wswvkevqdk lassqstfgs
     2641 katlerrltq iqeilllkgd gevklnmaig kgeqalkssn eegqkviqte lqtlkdvwnd
     2701 vistsvnwqs cldsiisqwn dylerknqle qwlenldhkv eqplepqigl kekfaqldhf
     2761 qaivseiedh sgdlqqliek avelsektgd dsfgdaaqee lktqfnditt vakekmrkve
     2821 divkdhllyl davheftdwl hsakeelhrw sdasgdtpti qkklakinel vesrqsgagr
     2881 lsrvealapa akrgttaggc qllaaemqal qadwrqwees arrsqgglre llsrmalser
     2941 efaaqaarle eaaqrlagql aawarglapa dsrstdaevv eswrkeketl dalvkseqmt
     3001 deiktqlndl crfsrdlsth sskvsglike ynslclqask gcqskeqilq qrfrtafrdf
     3061 qqwlvnarvt takcfdvpqn iseasaslqk iqeflsesen gqqklnlvas kgellcsvlp
     3121 kekaeviqdk saaakedwkn fittlhqkks aleslkiqmk dfeataeplq ewltttektv
     3181 qgsssrlhdl pskrreqqkl qsvleeisch ehqlnrlkek aqqlweeqav sksfmrrvsq
     3241 lssqyltlsn ltkekvsrmd rivaehqqfs qsikdlqdwv adavhmldsy chptadksvl
     3301 dsrmlklegl lavkqekevq mkivltrges vlqntslegv pviegqlqnl kdswasllst
     3361 ciqcksqleg alskwtsyqe dvnqfsrwmd kvetsmnase rqyaelrekt aalskaklln
     3421 eevlshnsll etievkgkgm aehyiaqlel qdlqerykfl kertkeavik aeglltlhqe
     3481 yqrnlkafev wlekeqekld clshldgdaq eqeatlrdlq elqvhcaegq allnaavhar
     3541 eevipwgipq iedraleslr qdwqvyqhrl searsqlnat vsklrlmekk fqkvndwltn
     3601 leekvairtg rrsgratkem qlqlmkkche ditvykddie evgvlaqqil eenltasrmg
     3661 sqatqltsry qtlllhvleq vkfleeeirc meeselsfsa ytnwygatnk nfknvitkfd
     3721 mvdktvmekk vqklevllsd mdighsllks arekgeraik ymeenevdql rkeigdhveq
     3781 leelagsirk ehmtsekclq lvkefsdkyk aqtqwvmeyq ailhapvepk selyekkaql
     3841 skyksiqqtv lshepsiksv iekgealcdl vndvalknni qdlqssyqel csktkacvet
     3901 levrvkehed ynsdlqegek wllhmssrla spdlmesnnl eiitqqlanq kaimeeiagf
     3961 edrlnslksk gdylisqcse hlqakfkqni qshlqgtrds ysaicstaqr vyqtlehelq
     4021 khvnhqdtlq qcqtwlstvq selkpttwta fsladavkqv khfralqeqa ntyldllcsm
     4081 cdlsdatvks taadiqqtkq tieqqimhsq ylsqgweeik qlkaelwiyf qdadqqlqnl
     4141 krrraeleln iaqnmvlqvk efsqklqskq saltsvteki nkltqgqesp ehkeigelsn
     4201 qwldlclqah nllmqreedl qrtrdyhdrm nvievflekl tkewdnlars daestnvhle
     4261 alqklaialq errfaledlk dqkqkmiehl nlddkelike qfshfeqrwt qledlvkrki
     4321 qvsvstleel slvhskfqel mewaeeqqps vsealkqspp pdmaqsllmd hlsicselea
     4381 kqlvlkmlvk dadrvmtnlg lnerqelqkt vsdaqhhvac lsdlvgqrrk hlnkalsekt
     4441 qflmavfeat nqihqhekkv mfpehicllp edvnkqirtc kntqanlkay qnevtglwaq
     4501 grdlmkeatn qeksevlgkl qelqnvydtv lqkcnqrlle leknivsrky fkedldkach
     4561 wlkqadivtf pevnvmnsnt elysqlakyq qileqspeye nlllslqrdg qevlpslnev
     4621 dhsyldekln slpqqfntvt alakeklykv qeaiyarkey aslieltska lteledqfin
     4681 mdkapaavsa keavslqqay rdlldeatsl aaavdelnqk keafrstgqp wqpdemlkla
     4741 tlyhklkrqi eqkisllddt ieacqehekm cmqfeaqlet vkkeqakvne etlpveeklk
     4801 iyhslmgslq dsesllkrit ehlealssqv dssayettnh qvkawqeklk slhsaivdtv
     4861 mecenrlvqs idfkteicrs lewlrwvkte lngtlsldlk lqniqeeirk vqihqeevqs
     4921 slrimnalsn kekerymkak elipadlent laelaeldge vqeaihvrqa tlnkayslcq
     4981 ryyqvmqian dwledaqefl qlarngldve nseenlrnhv effstesqfn dhlkvlqglv
     5041 seiepflqat aseqlvqnva aleekakgme qeaktqqeql qrcasewqey qtsrqkviev
     5101 mndaekklse fsvakaassh eaeeklqthk tlvsivnsfh ekitaleeka sqlekisnda
     5161 skasisrsmt tvwqrwtrlr nvaqeqekil edavqewkvf ndkiqkatia idqlqgrlpe
     5221 ssvekaskte llelldyhgs fllevdhqls slgllkqhav smlqnvevkp psqkelpvmq
     5281 eikamqdrch nmqqkvkkgm kmvkqelker eeveaeiniv kswiqetkey llspdaevdi
     5341 qlqelqslfg evtthsqave klaeqqqnky lglytilpse lslhlaevgl alvtvqdqiq
     5401 tkeretqqik tlnqefdqki qgianelnti lsklkkktnd iaqakleqki lgdeldscni
     5461 klleldasvq dfaeqnlpla kqlsnrigkl talhqqtirq aeyraaklsq aashleeyne
     5521 mlefilkwie kanilvhgsi twnsssqlrd qfkayqsild esgeihgdle amseridyla
     5581 svyctegmsq qvlelgrrte elqqvikvql pnlqdaakdm kkfeielral qaaleqaqat
     5641 ltspelghls lkeqlshrqh llsemeslkp kvqavqdcqs alripeevvt slpmchsalr
     5701 lqeeasrlqh taiqqcnimq eavvqyeqye qemkhlqqmi esahreiqnk piatsniqel
     5761 qvqisrneel aqkikgyqeq iaslnskckm ltmkakhatm lltvtevegl segmeeldsd
     5821 llpahpthps vvmmtagrch tllspvtees geegtnseis sppacrspsp vantdasvnq
     5881 diayyqalsa eqlqteaaki qpstsatqef yepglessas aklddlqrsw etlknvisek
     5941 qrtlyealer qqkyqdtlqs istkmettem klneslepak spesqmaehq almdeilmlq
     6001 eeiselqtsl aqelvsepld aegadqmalq stltvlaerm atirmkasgk rqlleeklne
     6061 qleeqrqeqa lqryrceade ldhwllstra sldtallpae epmdmeaqlv dcqnmlveie
     6121 qkvvalsels vhnenllmeg kahtkdeaeq lavklrtlkg sllelqrvlh dkqinirgsl
     6181 qekeesdldf issqspsvqe wlaqarttrs qqqqstlqqq keleqeleeq knllrsvacr
     6241 ggeiltqqss teglsisekp dalseelvle gekpsseeqm krkweslyqe fstkqrllqk
     6301 alekeqlqly srpnrlipgm plykeetqde dkslvspvlv elnqafedvs seagrveetl
     6361 hleqklydgv tatsvwldgv eeqvfvatal lpeeetetyl ckqeslakei kditeevdkn
     6421 knlfaqifpe ssdkrviied tldcllrrlt llesvvnqrc nqmkgrlqqi itfkndlklm
     6481 ftsvadnkyl llqklaeaad rpeteqmqvi lqaeeglkel daginelkkr idklhvdqps
     6541 vqelskiqdk ydellmiigs rrsdlnqnma lkrqyeralq dladlvetgq ekmagdqkmi
     6601 vsskeevqsl lekhkeyfqg leshmiltet lfrkmsslal lketqshsei mtrasavlkl
     6661 ahkrgveley iletwmhlde dyqeltrqle svegniptvg lveetedrlr dritlfqhlr
     6721 snlteyqpkl yqvlddgkrl lfsvscsele gqlnqlgerw lsntskvtke lhrletilkh
     6781 wtryqsesne ltqwlqsake rlefwsqqsl tvpqeletvr dhlnsflefs kevdtkssqk
     6841 ssvlstgnql lrlkkvdtaa lraglshiet qwtelltqip avqeklhqlq mdkipsrhai
     6901 tevmswislm enviqqdeen iknvvgqkai qgyvqkykgf kidlnckqlt vdfvnqsvlq
     6961 issqdveskr sdktdfaeql gamnrrwqil qglitekiql leslqeswte yennvqclkt
     7021 wfetqekklk qqqnigdqas vqnalkdcqe leesirtkek evenveqsgl slvqnkkeev
     7081 asavmntlqe inhswanldh mvsqlkillq svldqwsiyk vayeelngyl tearyslsrc
     7141 ylltgsleav kvqvdklqsl qdelekqens lqkfgsvtne llkechppvt etltntlkev
     7201 nmrwnnllqe vaerlrasra llqlwqrykd chqqcssmvh qreeqtnell ktatskdiad
     7261 devtswirdc ndvltdlkta qeslvvlqel geelksqvea saaaaiqsdh lslsqnlstl
     7321 eqalrkqqaa lqagvldyqt faknlevlet witeaeetlk eqdpshssdv saiqsrmeql
     7381 ksqmlkfssm apdldrlnel gyrlplndke ikrmqnlnrh wslissqtte rfsklqsfll
     7441 qqqtflekcg twmdllvqte qklavevsgn yqrlleqqre helfqaemfs rqqilhsiis
     7501 dgqhlleqgq vddrdefnln ltllsnqwqg virraqqmrg iidsrihqwq ryremaeklr
     7561 kwllemscqp vtelgsapip lpqarvllde vqlkekvllr qqgsyiltve agkqlllsad
     7621 sgaeavlqae lteiqerwki vstqleqqkk qlalllkdwe kcekgigdsl eklrsfkkkl
     7681 sqplpdhhde lhaeqircke lenavegwtd dlanlsllke tlsvyisadd isilseriel
     7741 lhrqweelch qvslrrqqvs erlnewavfs eknkelcewl tqmeskvsqn gdilieemie
     7801 klkkdyqeei avaqknkiql qqmgerlaka sheskaseie yklgkindrw qhlldliaar
     7861 vkklketlva vqqldknmss lrswlahies elskpivyet cdseeiqrkl neqqelqrdi
     7921 ekhstgvasv lnlcevllhd cdacateaec dsiqqatrnl drrwrnicam smerrlkiee
     7981 twrlwqkfld dysrfeewlk tsertaafps ssgvlytvak eelkkfeafq rqvhesltql
     8041 elinkqyrrl arenrtdsdg slkqmvhegn qrwdnlqkrv tsilrrlkhf igqreefeta
     8101 rdsilvwlte mdlqltnieh fsecdvqaki kqlkafqqei slnnnkieqi ivqgeqliek
     8161 sepldaavie eeldelrryc qevfgrvery hkklirlplt ddehdlsdre vdldesadls
     8221 dirwhdksad svlsphpssn lslplsqplr sersgrdtpa svdsiplewd hdydlsrdle
     8281 tavsrvlhse edggqekdfy lrgaagiadv eipetleayv tltenalkni sgepgaleah
     8341 irqldkaldt srfqiqqten iirsktptgp eldstykgym kllgecsgsi dsvrrlgykl
     8401 keeeekfsgl inmnstetqt agvierweli qaqalskelr mkqnlqqwqq fnsdlnsiwa
     8461 wlgeteeele klhrldlstd iqtielrikk lkelqkaidn rkaiilsinl csseftqsds
     8521 eeskklqerl sqmnvrwehv csmiedwrss lqdaliqcqd fhelshglll wlenidrrkn
     8581 eivpinpnld seilqdhhrl lmqirrelle sqlkvaslqd mscqllvnae gkdcleakek
     8641 vhvignrlkl llkevtrhik dlekildiss sqlelsswss deldtsgsvs pvsgrstpsr
     8701 qrtprgkcsl sqpgpsvssp hsrstrggsg sspseagpvw rcpsfflrvl raalplqlll
     8761 llliglaclv pmteedysca mannfarsfh pmlkymngpp pl
//
LOCUS       XP_041326026            8756 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326026
VERSION     XP_041326026.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470092.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8756
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8756
                     /product="nesprin-1 isoform X4"
                     /calculated_mol_wt=1006555
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          1263..2063
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1967..2176
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            2068..2073
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2203..2959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3049..3255
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3155..3160
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3161..3372
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3263..3268
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3367..4031
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3804..4019
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3904..3909
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4117..>4348
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4329..4542
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4435..4436,4438..4441)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4470..4654
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            4544..4549
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4581..5220
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5041..5784
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5903..6118
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(6010..6012,6024..6026)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6734..6957
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6844..6849
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6852..7067
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6958..6963
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6972..7168
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7066..7071
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7076..7287
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7175..7180
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7291..7493
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7392..7397
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7395..7606
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7499..7504
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7605..7822
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7717..7722
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7719..7934
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7821..7826
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7938..8148
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8044..8049
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8401..8620
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8508..8513
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8724..8755
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8756
                     /gene="SYNE1"
                     /coded_by="XM_041470092.1:339..26609"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qnmvrkagew
      901 rknieansrl mkkfeesrae lekviqianc clkekgnpee llrkhseffn qldqrvlnaf
      961 lkacdeltdi lpeqeqhslq eavrklhrqw kdlqteapyh lihlkievqk skflvtveec
     1021 kaelarqnkv lsregnermi kehmlffgdk gsyhlcekrl qrmeelcqkl pvsdpvrgtl
     1081 essqrilkdl ksqidstymk ltehsdtwkg yksrfselan wissterelk kikenvndta
     1141 kykqckasvg eirkhihkhg enhswlksrl avltslcpdl eaketedelc klssdfkrll
     1201 dllaeientl gavgdcvqyk eevksaieel innskevqae aekildtesl lqaqqlllhh
     1261 qqrtrrlrak rqdvqkqisq akrlqieggl pstvredlqk legtlenmqq tmekreeqlq
     1321 vtinkweqfe rdketvvkyl nqassvleri lnfsslesls seldqtkels kqteamavqa
     1381 enlvknssei qlgsknkqsl qhqaksiqeq vkkmevtlee diksmemvkn kwdhfgnnfe
     1441 alsnwiaeqe keletletss ssldiqisqi kvinkeidgk itgisnleee akafsqfvts
     1501 gerahikakl tqvkryweel rdhaqrlegt itgnasaqqk yeeslkqvqq svsefeakla
     1561 epltscssaa atyaalqdct dlchtvekls nplaslsagv rkvankekaa qkvtalqqky
     1621 ekvlesakek qnllenllaq wqkqekelsa flawlegcea vgrpaepyvs adriklegel
     1681 lalqdlradi eshtcvyesl lqlneslfpt askqcvktik ekfeelderw kalpqivdkr
     1741 inflqslvae hgqfdelllr fsdwikqfla elqatseist adqqlaashn knhsmevesk
     1801 kqelqilkel veklgsfssp edqqtlqgkt edcfqifqea sqitsqrqea ldqlrmfldl
     1861 hsavsgvlhq lrqtvektgn mdkakselle kelngvikdl nklesdaisl dgsltkaqyh
     1921 lkhsisgqrt scramvdnlg veleavqnll gtkqseaeal galqrsfmer keqllksied
     1981 teekadkegl kettlqalqq rlrvfnqlde elnshqhelq wlmdkakqia qkditlapes
     2041 dkeinrlesl wkdtkkaiqe kkeqscvlid lmkeyqslks tvmkviesan sasvtksiwk
     2101 dhedvrrils kheaakndls dkqkdldtft nkgkhllael krvhncdsta lktdmnsvvd
     2161 kwldvserld enidrlsvsv slwddilktg deldgwcnkc isqlneginn fsnsqrmell
     2221 lkdfqsevkn kelkleqlss kiselkelth sqeppadlqf iesdlrqkle hakdisetak
     2281 etlkdfttqk mqlqkligqm tdwltqveet llscarnldp ealnklketq kdlqlqqssi
     2341 dstretlnsl crkyhsvele alggtvtlli kkyeavnllc srtqarmqes lekhflysmq
     2401 efqewfsgvk aavkessdrs gdskaieakl hdlqgvldsi segqkkldaa ckegeslygc
     2461 lpkpvvshiq eqiaksnqnf qefliqclnd kkaleacash lgnfedqykk lalwmhdmee
     2521 ristealgen kqlvsekkke vqkvekflee llnsrdsfdq lsqmaqalne eghgagrevr
     2581 lasqhltsyq nmvktvkekl rtcqlalqeh ltfeealqsm wswvkevqdk lassqstfgs
     2641 katlerrltq iqeilllkgd gevklnmaig kgeqalkssn eegqkviqte lqtlkdvwnd
     2701 vistsvnwqs cldsiisqwn dylerknqle qwlenldhkv eqplepqigl kekfaqldhf
     2761 qaivseiedh sgdlqqliek avelsektgd dsfgdaaqee lktqfnditt vakekmrkve
     2821 divkdhllyl davheftdwl hsakeelhrw sdasgdtpti qkklakinel vesrqsgagr
     2881 lsrvealapa akrgttaggc qllaaemqal qadwrqwees arrsqgglre llsrmalser
     2941 efaaqaarle eaaqrlagql aawarglapa dsrstdaevv eswrkeketl dalvkseqmt
     3001 deiktqlndl crfsrdlsth sskvsglike ynslclqask gcqskeqilq qrfrtafrdf
     3061 qqwlvnarvt takcfdvpqn iseasaslqk iqeflsesen gqqklnlvas kgellcsvlp
     3121 kekaeviqdk saaakedwkn fittlhqkks aleslkiqmk dfeataeplq ewltttektv
     3181 qgsssrlhdl pskrreqqkl qsvleeisch ehqlnrlkek aqqlweeqav sksfmrrvsq
     3241 lssqyltlsn ltkekvsrmd rivaehqqfs qsikdlqdwv adavhmldsy chptadksvl
     3301 dsrmlklegl lavkqekevq mkivltrges vlqntslegv pviegqlqnl kdswasllst
     3361 ciqcksqleg alskwtsyqe dvnqfsrwmd kvetsmnase rqyaelrekt aalskaklln
     3421 eevlshnsll etievkgkgm aehyiaqlel qdlqerykfl kertkeavik aeglltlhqe
     3481 yqrnlkafev wlekeqekld clshldgdaq eqeatlrdlq elqvhcaegq allnaavhar
     3541 eevipwgipq iedraleslr qdwqvyqhrl searsqlnat vsklrlmekk fqkvndwltn
     3601 leekvairtg rrsgratkem qlqlmkkche ditvykddie evgvlaqqil eenltasrmg
     3661 sqatqltsry qtlllhvleq vkfleeeirc meeselsfsa ytnwygatnk nfknvitkfd
     3721 mvdktvmekk vqklevllsd mdighsllks arekgeraik ymeenevdql rkeigdhveq
     3781 leelagsirk ehmtsekclq lvkefsdkyk aqtqwvmeyq ailhapvepk selyekkaql
     3841 skyksiqqtv lshepsiksv iekgealcdl vndvalknni qdlqssyqel csktkacvet
     3901 levrvkehed ynsdlqegek wllhmssrla spdlmesnnl eiitqqlanq kaimeeiagf
     3961 edrlnslksk gdylisqcse hlqakfkqni qshlqgtrds ysaicstaqr vyqtlehelq
     4021 khvnhqdtlq qcqtwlstvq selkpttwta fsladavkqv khfralqeqa ntyldllcsm
     4081 cdlsdatvks taadiqqtkq tieqqimhsq ylsqgweeik qlkaelwiyf qdadqqlqnl
     4141 krrraeleln iaqnmvlqvk efsqklqskq saltsvteki nkltqgqesp ehkeigelsn
     4201 qwldlclqah nllmqreedl qrtrdyhdrm nvievflekl tkewdnlars daestnvhle
     4261 alqklaialq errfaledlk dqkqkmiehl nlddkelike qfshfeqrwt qledlvkrki
     4321 qvsvstleel slvhskfqel mewaeeqqps vsealkqspp pdmaqsllmd hlsicselea
     4381 kqlvlkmlvk dadrvmtnlg lnerqelqkt vsdaqhhvac lsdlvgqrrk hlnkalsekt
     4441 qflmavfeat nqihqhekkv mfpehicllp edvnkqirtc kntqanlkay qnevtglwaq
     4501 grdlmkeatn qeksevlgkl qelqnvydtv lqkcnqrlle leknivsrky fkedldkach
     4561 wlkqadivtf pevnvmnsnt elysqlakyq qileqspeye nlllslqrdg qevlpslnev
     4621 dhsyldekln slpqqfntvt alakeklykv qeaiyarkey aslieltska lteledqfin
     4681 mdkapaavsa keavslqqay rdlldeatsl aaavdelnqk keafrstgqp wqpdemlkla
     4741 tlyhklkrqi eqkisllddt ieacqehekm cmqfeaqlet vkkeqakvne etlpveeklk
     4801 iyhslmgslq dsesllkrit ehlealssqv dssayettnh qvkawqeklk slhsaivdtv
     4861 mecenrlvqs idfkteicrs lewlrwvkte lngtlsldlk lqniqeeirk vqihqeevqs
     4921 slrimnalsn kekerymkak elipadlent laelaeldge vqeaihvrqa tlnkayslcq
     4981 ryyqvmqian dwledaqefl qlarngldve nseenlrnhv effstesqfn dhlkvlqglv
     5041 seiepflqat aseqlvqnva aleekakgme qeaktqqeql qrcasewqey qtsrqkviev
     5101 mndaekklse fsvakaassh eaeeklqthk tlvsivnsfh ekitaleeka sqlekisnda
     5161 skasisrsmt tvwqrwtrlr nvaqeqekil edavqewkvf ndkiqkatia idqlqgrlpe
     5221 ssvekaskte llelldyhgs fllevdhqls slgllkqhav smlqnvevkp psqkelpvmq
     5281 eikamqdrch nmqqkvkkgm kmvkqelker eeveaeiniv kswiqetkey llspdaevdi
     5341 qlqelqslfg evtthsqave klaeqqqnky lglytilpse lslhlaevgl alvtvqdqiq
     5401 tkeretqqik tlnqefdqki qgianelnti lsklkkktnd iaqakleqki lgdeldscni
     5461 klleldasvq dfaeqnlpla kqlsnrigkl talhqqtirq aeyraaklsq aashleeyne
     5521 mlefilkwie kanilvhgsi twnsssqlrd qfkayqsild esgeihgdle amseridyla
     5581 svyctegmsq qvlelgrrte elqqvikvql pnlqdaakdm kkfeielral qaaleqaqat
     5641 ltspelghls lkeqlshrqh llsemeslkp kvqavqdcqs alripeevvt slpmchsalr
     5701 lqeeasrlqh taiqqcnimq eavvqyeqye qemkhlqqmi esahreiqnk piatsniqel
     5761 qvqisrneel aqkikgyqeq iaslnskckm ltmkakhatm lltvtevegl segmeeldsd
     5821 llpahpthps vvmdiayyqa lsaeqlqtea akiqpstsat qefyepgles sasaklddlq
     5881 rswetlknvi sekqrtlyea lerqqkyqdt lqsistkmet temklnesle pakspesqma
     5941 ehqalmdeil mlqeeiselq tslaqelvse pldaegadqm alqstltvla ermatirmka
     6001 sgkrqlleek lneqleeqrq eqalqryrce adeldhwlls trasldtall paeepmdmea
     6061 qlvdcqnmlv eieqkvvals elsvhnenll megkahtkde aeqlavklrt lkgsllelqr
     6121 vlhdkqinir qgslqekees dldfissqsp svqewlaqar ttrsqqqqst lqqqkeleqe
     6181 leeqknllrs vacrggeilt qqssteglsi sekpdalsee lvlegekpss eeqmkrkwes
     6241 lyqefstkqr llqkalekeq lqlysrpnrl ipgmplykee tqdedkslvs pvlvelnqaf
     6301 edvsseagrv eetlhleqkl ydgvtatsvw ldgveeqvfv atallpeeet etylckqesl
     6361 akeikditee vdknknlfaq ifpessdkrv iiedtldcll rrltllesvv nqrcnqmkgr
     6421 lqqiitfknd lklmftsvad nkylllqkla eaadrpeteq mqvilqaeeg lkeldagine
     6481 lkkridklhv dqpsvqelsk iqdkydellm iigsrrsdln qnmalkrqye ralqdladlv
     6541 etgqekmagd qkmivsskee vqsllekhke yfqgleshmi ltetlfrkms slallketqs
     6601 hseimtrasa vlklahkrgv eleyiletwm hldedyqelt rqlesvegni ptvglveete
     6661 drlrdritlf qhlrsnltey qpklyqvldd gkrllfsvsc selegqlnql gerwlsntsk
     6721 vtkelhrlet ilkhwtryqs esneltqwlq sakerlefws qqsltvpqel etvrdhlnsf
     6781 lefskevdtk ssqkssvlst gnqllrlkkv dtaalragls hietqwtell tqipavqekl
     6841 hqlqmdkips rhaitevmsw islmenviqq deeniknvvg qkaiqgyvqk ykgfkidlnc
     6901 kqltvdfvnq svlqissqdv eskrsdktdf aeqlgamnrr wqilqglite kiqlleslqe
     6961 swteyennvq clktwfetqe kklkqqqnig dqasvqnalk dcqeleesir tkekevenve
     7021 qsglslvqnk keevasavmn tlqeinhswa nldhmvsqlk illqsvldqw siykvayeel
     7081 ngyltearys lsrcylltgs leavkvqvdk lqslqdelek qenslqkfgs vtnellkech
     7141 ppvtetltnt lkevnmrwnn llqevaerlr asrallqlwq rykdchqqcs smvhqreeqt
     7201 nellktatsk diaddevtsw irdcndvltd lktaqeslvv lqelgeelks qveasaaaai
     7261 qsdhlslsqn lstleqalrk qqaalqagvl dyqtfaknle vletwiteae etlkeqdpsh
     7321 ssdvsaiqsr meqlksqmlk fssmapdldr lnelgyrlpl ndkeikrmqn lnrhwsliss
     7381 qtterfsklq sfllqqqtfl ekcgtwmdll vqteqklave vsgnyqrlle qqrehelfqa
     7441 emfsrqqilh siisdgqhll eqgqvddrde fnlnltllsn qwqgvirraq qmrgiidsri
     7501 hqwqryrema eklrkwllem scqpvtelgs apiplpqarv lldevqlkek vllrqqgsyi
     7561 ltveagkqll lsadsgaeav lqaelteiqe rwkivstqle qqkkqlalll kdwekcekgi
     7621 gdsleklrsf kkklsqplpd hhdelhaeqi rckelenave gwtddlanls llketlsvyi
     7681 saddisilse riellhrqwe elchqvslrr qqvserlnew avfseknkel cewltqmesk
     7741 vsqngdilie emieklkkdy qeeiavaqkn kiqlqqmger lakasheska seieyklgki
     7801 ndrwqhlldl iaarvkklke tlvavqqldk nmsslrswla hieselskpi vyetcdseei
     7861 qrklneqqel qrdiekhstg vasvlnlcev llhdcdacat eaecdsiqqa trnldrrwrn
     7921 icamsmerrl kieetwrlwq kflddysrfe ewlktserta afpsssgvly tvakeelkkf
     7981 eafqrqvhes ltqlelinkq yrrlarenrt dsdgslkqmv hegnqrwdnl qkrvtsilrr
     8041 lkhfigqree fetardsilv wltemdlqlt niehfsecdv qakikqlkaf qqeislnnnk
     8101 ieqiivqgeq liekseplda avieeeldel rrycqevfgr veryhkklir lpltddehdl
     8161 sdrevdldes adlsdirwhd ksadsvlsph pssnlslpls qplrsersgr dtpasvdsip
     8221 lewdhdydls rdletavsrv lhseedggqe kdfylrgaag iadveipetl eayvtltena
     8281 lknisgepga leahirqldk aldtsrfqiq qteniirskt ptgpeldsty kgymkllgec
     8341 sgsidsvrrl gyklkeeeek fsglinmnst etqtagvier weliqaqals kelrmkqnlq
     8401 qwqqfnsdln siwawlgete eeleklhrld lstdiqtiel rikklkelqk aidnrkaiil
     8461 sinlcsseft qsdseeskkl qerlsqmnvr wehvcsmied wrsslqdali qcqdfhelsh
     8521 glllwlenid rrkneivpin pnldseilqd hhrllmqirr ellesqlkva slqdmscqll
     8581 vnaegkdcle akekvhvign rlklllkevt rhikdlekil disssqlels swssdeldts
     8641 gsvspvsgrs tpsrqrtprg kcslsqpgps vssphsrstr ggsgsspsea gpvwrcpsff
     8701 lrvlraalpl qlllllligl aclvpmteed yscamannfa rsfhpmlkym ngpppl
//
LOCUS       XP_041326027            8754 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326027
VERSION     XP_041326027.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470093.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8754
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8754
                     /product="nesprin-1 isoform X5"
                     /calculated_mol_wt=1005913
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          1263..2063
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1967..2176
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            2068..2073
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2203..2959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3049..3255
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3155..3160
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3161..3372
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3263..3268
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3367..4031
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3804..4019
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3904..3909
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4117..>4348
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4329..4542
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4435..4436,4438..4441)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4581..5220
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5041..5784
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5950..6165
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(6057..6059,6071..6073)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6781..7004
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6891..6896
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6899..7114
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7005..7010
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7019..7215
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7113..7118
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7123..7334
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7222..7227
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7338..7540
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7439..7444
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7442..7653
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7546..7551
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7652..7869
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7764..7769
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7766..7981
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7868..7873
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7985..8195
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8091..8096
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8399..8618
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8506..8511
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8722..8753
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8754
                     /gene="SYNE1"
                     /coded_by="XM_041470093.1:339..26603"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qnmvrkagew
      901 rknieansrl mkkfeesrae lekviqianc clkekgnpee llrkhseffn qldqrvlnaf
      961 lkacdeltdi lpeqeqhslq eavrklhrqw kdlqteapyh lihlkievqk skflvtveec
     1021 kaelarqnkv lsregnermi kehmlffgdk gsyhlcekrl qrmeelcqkl pvsdpvrgtl
     1081 essqrilkdl ksqidstymk ltehsdtwkg yksrfselan wissterelk kikenvndta
     1141 kykqckasvg eirkhihkhg enhswlksrl avltslcpdl eaketedelc klssdfkrll
     1201 dllaeientl gavgdcvqyk eevksaieel innskevqae aekildtesl lqaqqlllhh
     1261 qqrtrrlrak rqdvqkqisq akrlqieggl pstvredlqk legtlenmqq tmekreeqlq
     1321 vtinkweqfe rdketvvkyl nqassvleri lnfsslesls seldqtkels kqteamavqa
     1381 enlvknssei qlgsknkqsl qhqaksiqeq vkkmevtlee diksmemvkn kwdhfgnnfe
     1441 alsnwiaeqe keletletss ssldiqisqi kvinkeidgk itgisnleee akafsqfvts
     1501 gerahikakl tqvkryweel rdhaqrlegt itgnasaqqk yeeslkqvqq svsefeakla
     1561 epltscssaa atyaalqdct dlchtvekls nplaslsagv rkvankekaa qkvtalqqky
     1621 ekvlesakek qnllenllaq wqkqekelsa flawlegcea vgrpaepyvs adriklegel
     1681 lalqdlradi eshtcvyesl lqlneslfpt askqcvktik ekfeelderw kalpqivdkr
     1741 inflqslvae hgqfdelllr fsdwikqfla elqatseist adqqlaashn knhsmevesk
     1801 kqelqilkel veklgsfssp edqqtlqgkt edcfqifqea sqitsqrqea ldqlrmfldl
     1861 hsavsgvlhq lrqtvektgn mdkakselle kelngvikdl nklesdaisl dgsltkaqyh
     1921 lkhsisgqrt scramvdnlg veleavqnll gtkqseaeal galqrsfmer keqllksied
     1981 teekadkegl kettlqalqq rlrvfnqlde elnshqhelq wlmdkakqia qkditlapes
     2041 dkeinrlesl wkdtkkaiqe kkeqscvlid lmkeyqslks tvmkviesan sasvtksiwk
     2101 dhedvrrils kheaakndls dkqkdldtft nkgkhllael krvhncdsta lktdmnsvvd
     2161 kwldvserld enidrlsvsv slwddilktg deldgwcnkc isqlneginn fsnsqrmell
     2221 lkdfqsevkn kelkleqlss kiselkelth sqeppadlqf iesdlrqkle hakdisetak
     2281 etlkdfttqk mqlqkligqm tdwltqveet llscarnldp ealnklketq kdlqlqqssi
     2341 dstretlnsl crkyhsvele alggtvtlli kkyeavnllc srtqarmqes lekhflysmq
     2401 efqewfsgvk aavkessdrs gdskaieakl hdlqgvldsi segqkkldaa ckegeslygc
     2461 lpkpvvshiq eqiaksnqnf qefliqclnd kkaleacash lgnfedqykk lalwmhdmee
     2521 ristealgen kqlvsekkke vqkvekflee llnsrdsfdq lsqmaqalne eghgagrevr
     2581 lasqhltsyq nmvktvkekl rtcqlalqeh ltfeealqsm wswvkevqdk lassqstfgs
     2641 katlerrltq iqeilllkgd gevklnmaig kgeqalkssn eegqkviqte lqtlkdvwnd
     2701 vistsvnwqs cldsiisqwn dylerknqle qwlenldhkv eqplepqigl kekfaqldhf
     2761 qaivseiedh sgdlqqliek avelsektgd dsfgdaaqee lktqfnditt vakekmrkve
     2821 divkdhllyl davheftdwl hsakeelhrw sdasgdtpti qkklakinel vesrqsgagr
     2881 lsrvealapa akrgttaggc qllaaemqal qadwrqwees arrsqgglre llsrmalser
     2941 efaaqaarle eaaqrlagql aawarglapa dsrstdaevv eswrkeketl dalvkseqmt
     3001 deiktqlndl crfsrdlsth sskvsglike ynslclqask gcqskeqilq qrfrtafrdf
     3061 qqwlvnarvt takcfdvpqn iseasaslqk iqeflsesen gqqklnlvas kgellcsvlp
     3121 kekaeviqdk saaakedwkn fittlhqkks aleslkiqmk dfeataeplq ewltttektv
     3181 qgsssrlhdl pskrreqqkl qsvleeisch ehqlnrlkek aqqlweeqav sksfmrrvsq
     3241 lssqyltlsn ltkekvsrmd rivaehqqfs qsikdlqdwv adavhmldsy chptadksvl
     3301 dsrmlklegl lavkqekevq mkivltrges vlqntslegv pviegqlqnl kdswasllst
     3361 ciqcksqleg alskwtsyqe dvnqfsrwmd kvetsmnase rqyaelrekt aalskaklln
     3421 eevlshnsll etievkgkgm aehyiaqlel qdlqerykfl kertkeavik aeglltlhqe
     3481 yqrnlkafev wlekeqekld clshldgdaq eqeatlrdlq elqvhcaegq allnaavhar
     3541 eevipwgipq iedraleslr qdwqvyqhrl searsqlnat vsklrlmekk fqkvndwltn
     3601 leekvairtg rrsgratkem qlqlmkkche ditvykddie evgvlaqqil eenltasrmg
     3661 sqatqltsry qtlllhvleq vkfleeeirc meeselsfsa ytnwygatnk nfknvitkfd
     3721 mvdktvmekk vqklevllsd mdighsllks arekgeraik ymeenevdql rkeigdhveq
     3781 leelagsirk ehmtsekclq lvkefsdkyk aqtqwvmeyq ailhapvepk selyekkaql
     3841 skyksiqqtv lshepsiksv iekgealcdl vndvalknni qdlqssyqel csktkacvet
     3901 levrvkehed ynsdlqegek wllhmssrla spdlmesnnl eiitqqlanq kaimeeiagf
     3961 edrlnslksk gdylisqcse hlqakfkqni qshlqgtrds ysaicstaqr vyqtlehelq
     4021 khvnhqdtlq qcqtwlstvq selkpttwta fsladavkqv khfralqeqa ntyldllcsm
     4081 cdlsdatvks taadiqqtkq tieqqimhsq ylsqgweeik qlkaelwiyf qdadqqlqnl
     4141 krrraeleln iaqnmvlqvk efsqklqskq saltsvteki nkltqgqesp ehkeigelsn
     4201 qwldlclqah nllmqreedl qrtrdyhdrm nvievflekl tkewdnlars daestnvhle
     4261 alqklaialq errfaledlk dqkqkmiehl nlddkelike qfshfeqrwt qledlvkrki
     4321 qvsvstleel slvhskfqel mewaeeqqps vsealkqspp pdmaqsllmd hlsicselea
     4381 kqlvlkmlvk dadrvmtnlg lnerqelqkt vsdaqhhvac lsdlvgqrrk hlnkalsekt
     4441 qflmavfeat nqihqhekkv mfpehicllp edvnkqirtc kntqanlkay qnevtglwaq
     4501 grdlmkeatn qeksevlgkl qelqnvydtv lqkcnqrlle leknivsrky fkedldkach
     4561 wlkqadivtf pevnvmnsnt elysqlakyq qileqspeye nlllslqrdg qevlpslnev
     4621 dhsyldekln slpqqfntvt alakeklykv qeaiyarkey aslieltska lteledqfin
     4681 mdkapaavsa keavslqqay rdlldeatsl aaavdelnqk keafrstgqp wqpdemlkla
     4741 tlyhklkrqi eqkisllddt ieacqehekm cmqfeaqlet vkkeqakvne etlpveeklk
     4801 iyhslmgslq dsesllkrit ehlealssqv dssayettnh qvkawqeklk slhsaivdtv
     4861 mecenrlvqs idfkteicrs lewlrwvkte lngtlsldlk lqniqeeirk vqihqeevqs
     4921 slrimnalsn kekerymkak elipadlent laelaeldge vqeaihvrqa tlnkayslcq
     4981 ryyqvmqian dwledaqefl qlarngldve nseenlrnhv effstesqfn dhlkvlqglv
     5041 seiepflqat aseqlvqnva aleekakgme qeaktqqeql qrcasewqey qtsrqkviev
     5101 mndaekklse fsvakaassh eaeeklqthk tlvsivnsfh ekitaleeka sqlekisnda
     5161 skasisrsmt tvwqrwtrlr nvaqeqekil edavqewkvf ndkiqkatia idqlqgrlpe
     5221 ssvekaskte llelldyhgs fllevdhqls slgllkqhav smlqnvevkp psqkelpvmq
     5281 eikamqdrch nmqqkvkkgm kmvkqelker eeveaeiniv kswiqetkey llspdaevdi
     5341 qlqelqslfg evtthsqave klaeqqqnky lglytilpse lslhlaevgl alvtvqdqiq
     5401 tkeretqqik tlnqefdqki qgianelnti lsklkkktnd iaqakleqki lgdeldscni
     5461 klleldasvq dfaeqnlpla kqlsnrigkl talhqqtirq aeyraaklsq aashleeyne
     5521 mlefilkwie kanilvhgsi twnsssqlrd qfkayqsild esgeihgdle amseridyla
     5581 svyctegmsq qvlelgrrte elqqvikvql pnlqdaakdm kkfeielral qaaleqaqat
     5641 ltspelghls lkeqlshrqh llsemeslkp kvqavqdcqs alripeevvt slpmchsalr
     5701 lqeeasrlqh taiqqcnimq eavvqyeqye qemkhlqqmi esahreiqnk piatsniqel
     5761 qvqisrneel aqkikgyqeq iaslnskckm ltmkakhatm lltvtevegl segmeeldsd
     5821 llpahpthps vvmmtagrch tllspvtees geegtnseis sppacrspsp vantdasvnq
     5881 diayyqalsa eqlqteaaki qpstsatqef yepglessas aklddlqrsw etlknvisek
     5941 qrtlyealer qqkyqdtlqs istkmettem klneslepak spesqmaehq almdeilmlq
     6001 eeiselqtsl aqelvsepld aegadqmalq stltvlaerm atirmkasgk rqlleeklne
     6061 qleeqrqeqa lqryrceade ldhwllstra sldtallpae epmdmeaqlv dcqnmlveie
     6121 qkvvalsels vhnenllmeg kahtkdeaeq lavklrtlkg sllelqrvlh dkqinirqgs
     6181 lqekeesdld fissqspsvq ewlaqarttr sqqqqstlqq qkeleqelee qknllrsvac
     6241 rggeiltqqs steglsisek pdalseelvl egekpsseeq mkrkweslyq efstkqrllq
     6301 kalekeqlql ysrpnrlipg mplykeetqd edkslvspvl velnqafedv sseagrveet
     6361 lhleqklydg vtatsvwldg veeqvfvata llpeeetety lckqeslake ikditeevdk
     6421 nknlfaqifp essdkrviie dtldcllrrl tllesvvnqr cnqmkgrlqq iitfkndlkl
     6481 mftsvadnky lllqklaeaa drpeteqmqv ilqaeeglke ldaginelkk ridklhvdqp
     6541 svqelskiqd kydellmiig srrsdlnqnm alkrqyeral qdladlvetg qekmagdqkm
     6601 ivsskeevqs llekhkeyfq gleshmilte tlfrkmssla llketqshse imtrasavlk
     6661 lahkrgvele yiletwmhld edyqeltrql esvegniptv glveetedrl rdritlfqhl
     6721 rsnlteyqpk lyqvlddgkr llfsvscsel egqlnqlger wlsntskvtk elhrletilk
     6781 hwtryqsesn eltqwlqsak erlefwsqqs ltvpqeletv rdhlnsflef skevdtkssq
     6841 kssvlstgnq llrlkkvdta alraglshie tqwtelltqi pavqeklhql qmdkipsrha
     6901 itevmswisl menviqqdee niknvvgqka iqgyvqkykg fkidlnckql tvdfvnqsvl
     6961 qissqdvesk rsdktdfaeq lgamnrrwqi lqglitekiq lleslqeswt eyennvqclk
     7021 twfetqekkl kqqqnigdqa svqnalkdcq eleesirtke kevenveqsg lslvqnkkee
     7081 vasavmntlq einhswanld hmvsqlkill qsvldqwsiy kvayeelngy ltearyslsr
     7141 cylltgslea vkvqvdklqs lqdelekqen slqkfgsvtn ellkechppv tetltntlke
     7201 vnmrwnnllq evaerlrasr allqlwqryk dchqqcssmv hqreeqtnel lktatskdia
     7261 ddevtswird cndvltdlkt aqeslvvlqe lgeelksqve asaaaaiqsd hlslsqnlst
     7321 leqalrkqqa alqagvldyq tfaknlevle twiteaeetl keqdpshssd vsaiqsrmeq
     7381 lksqmlkfss mapdldrlne lgyrlplndk eikrmqnlnr hwslissqtt erfsklqsfl
     7441 lqqqtflekc gtwmdllvqt eqklavevsg nyqrlleqqr ehelfqaemf srqqilhsii
     7501 sdgqhlleqg qvddrdefnl nltllsnqwq gvirraqqmr giidsrihqw qryremaekl
     7561 rkwllemscq pvtelgsapi plpqarvlld evqlkekvll rqqgsyiltv eagkqlllsa
     7621 dsgaeavlqa elteiqerwk ivstqleqqk kqlalllkdw ekcekgigds leklrsfkkk
     7681 lsqplpdhhd elhaeqirck elenavegwt ddlanlsllk etlsvyisad disilserie
     7741 llhrqweelc hqvslrrqqv serlnewavf seknkelcew ltqmeskvsq ngdilieemi
     7801 eklkkdyqee iavaqknkiq lqqmgerlak asheskasei eyklgkindr wqhlldliaa
     7861 rvkklketlv avqqldknms slrswlahie selskpivye tcdseeiqrk lneqqelqrd
     7921 iekhstgvas vlnlcevllh dcdacateae cdsiqqatrn ldrrwrnica msmerrlkie
     7981 etwrlwqkfl ddysrfeewl ktsertaafp sssgvlytva keelkkfeaf qrqvhesltq
     8041 lelinkqyrr larenrtdsd gslkqmvheg nqrwdnlqkr vtsilrrlkh figqreefet
     8101 ardsilvwlt emdlqltnie hfsecdvqak ikqlkafqqe islnnnkieq iivqgeqlie
     8161 ksepldaavi eeeldelrry cqevfgrver yhkklirlpp lrsersgrdt pasvdsiple
     8221 wdhdydlsrd letavsrvlh seedggqekd fylrgaagia dveipetlea yvtltenalk
     8281 nisgepgale ahirqldkal dtsrfqiqqt eniirsktpt gpeldstykg ymkllgecsg
     8341 sidsvrrlgy klkeeeekfs glinmnstet qtagvierwe liqaqalske lrmkqnlqqw
     8401 qqfnsdlnsi wawlgeteee leklhrldls tdiqtielri kklkelqkai dnrkaiilsi
     8461 nlcsseftqs dseeskklqe rlsqmnvrwe hvcsmiedwr sslqdaliqc qdfhelshgl
     8521 llwlenidrr kneivpinpn ldseilqdhh rllmqirrel lesqlkvasl qdmscqllvn
     8581 aegkdcleak ekvhvignrl klllkevtrh ikdlekildi sssqlelssw ssdeldtsgs
     8641 vspvsgrstp srqrtprgkc slsqpgpsvs sphsrstrgg sgsspseagp vwrcpsfflr
     8701 vlraalplql llllliglac lvpmteedys camannfars fhpmlkymng pppl
//
LOCUS       XP_041326028            8748 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326028
VERSION     XP_041326028.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470094.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8748
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8748
                     /product="nesprin-1 isoform X6"
                     /calculated_mol_wt=1004887
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          <725..1259
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          1208..2008
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1718..>2429
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2148..2904
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2994..3200
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3100..3105
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3106..3317
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3208..3213
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3312..3976
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3749..3964
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3849..3854
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4062..>4293
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4274..4487
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4380..4381,4383..4386)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4526..5165
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          4986..5729
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5895..6110
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(6002..6004,6016..6018)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6224..7037
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          6726..6949
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6836..6841
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6844..7059
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6950..6955
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6964..7160
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7058..7063
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7068..7279
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7167..7172
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7283..7485
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7384..7389
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7387..7598
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7491..7496
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7597..7814
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7709..7714
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7711..7926
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7813..7818
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7930..8140
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8036..8041
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8393..8612
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8500..8505
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8716..8747
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8748
                     /gene="SYNE1"
                     /coded_by="XM_041470094.1:339..26585"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qeffnqldqr
      901 vlnaflkacd eltdilpeqe qhslqeavrk lhrqwkdlqt eapyhlihlk ievqkskflv
      961 tveeckaela rqnkvlsreg nermikehml ffgdkgsyhl cekrlqrmee lcqklpvsdp
     1021 vrgtlessqr ilkdlksqid stymkltehs dtwkgyksrf selanwisst erelkkiken
     1081 vndtakykqc kasvgeirkh ihkhgenhsw lksrlavlts lcpdleaket edelcklssd
     1141 fkrlldllae ientlgavgd cvqykeevks aieelinnsk evqaeaekil dtesllqaqq
     1201 lllhhqqrtr rlrakrqdvq kqisqakrlq iegglpstvr edlqklegtl enmqqtmekr
     1261 eeqlqvtink weqferdket vvkylnqass vlerilnfss leslsseldq tkelskqtea
     1321 mavqaenlvk nsseiqlgsk nkqslqhqak siqeqvkkme vtleediksm emvknkwdhf
     1381 gnnfealsnw iaeqekelet letssssldi qisqikvink eidgkitgis nleeeakafs
     1441 qfvtsgerah ikakltqvkr yweelrdhaq rlegtitgna saqqkyeesl kqvqqsvsef
     1501 eaklaeplts cssaaatyaa lqdctdlcht veklsnplas lsagvrkvan kekaaqkvta
     1561 lqqkyekvle sakekqnlle nllaqwqkqe kelsaflawl egceavgrpa epyvsadrik
     1621 legellalqd lradieshtc vyesllqlne slfptaskqc vktikekfee lderwkalpq
     1681 ivdkrinflq slvaehgqfd elllrfsdwi kqflaelqat seistadqql aashnknhsm
     1741 eveskkqelq ilkelveklg sfsspedqqt lqgktedcfq ifqeasqits qrqealdqlr
     1801 mfldlhsavs gvlhqlrqtv ektgnmdkak sellekelng vikdlnkles daisldgslt
     1861 kaqyhlkhsi sgqrtscram vdnlgvelea vqnllgtkqs eaealgalqr sfmerkeqll
     1921 ksiedteeka dkeglkettl qalqqrlrvf nqldeelnsh qhelqwlmdk akqiaqkdit
     1981 lapesdkein rleslwkdtk kaiqekkeqs cvlidlmkey qslkstvmkv iesansasvt
     2041 ksiwkdhedv rrilskheaa kndlsdkqkd ldtftnkgkh llaelkrvhn cdstalktdm
     2101 nsvvdkwldv serldenidr lsvsvslwdd ilktgdeldg wcnkcisqln eginnfsnsq
     2161 rmelllkdfq sevknkelkl eqlsskisel kelthsqepp adlqfiesdl rqklehakdi
     2221 setaketlkd fttqkmqlqk ligqmtdwlt qveetllsca rnldpealnk lketqkdlql
     2281 qqssidstre tlnslcrkyh svelealggt vtllikkyea vnllcsrtqa rmqeslekhf
     2341 lysmqefqew fsgvkaavke ssdrsgdska ieaklhdlqg vldsisegqk kldaackege
     2401 slygclpkpv vshiqeqiak snqnfqefli qclndkkale acashlgnfe dqykklalwm
     2461 hdmeeriste algenkqlvs ekkkevqkve kfleellnsr dsfdqlsqma qalneeghga
     2521 grevrlasqh ltsyqnmvkt vkeklrtcql alqehltfee alqsmwswvk evqdklassq
     2581 stfgskatle rrltqiqeil llkgdgevkl nmaigkgeqa lkssneegqk viqtelqtlk
     2641 dvwndvists vnwqscldsi isqwndyler knqleqwlen ldhkveqple pqiglkekfa
     2701 qldhfqaivs eiedhsgdlq qliekavels ektgddsfgd aaqeelktqf ndittvakek
     2761 mrkvedivkd hllyldavhe ftdwlhsake elhrwsdasg dtptiqkkla kinelvesrq
     2821 sgagrlsrve alapaakrgt taggcqllaa emqalqadwr qweesarrsq gglrellsrm
     2881 alserefaaq aarleeaaqr lagqlaawar glapadsrst daevveswrk eketldalvk
     2941 seqmtdeikt qlndlcrfsr dlsthsskvs glikeynslc lqaskgcqsk eqilqqrfrt
     3001 afrdfqqwlv narvttakcf dvpqniseas aslqkiqefl sesengqqkl nlvaskgell
     3061 csvlpkekae viqdksaaak edwknfittl hqkksalesl kiqmkdfeat aeplqewltt
     3121 tektvqgsss rlhdlpskrr eqqklqsvle eischehqln rlkekaqqlw eeqavsksfm
     3181 rrvsqlssqy ltlsnltkek vsrmdrivae hqqfsqsikd lqdwvadavh mldsychpta
     3241 dksvldsrml klegllavkq ekevqmkivl trgesvlqnt slegvpvieg qlqnlkdswa
     3301 sllstciqck sqlegalskw tsyqedvnqf srwmdkvets mnaserqyae lrektaalsk
     3361 akllneevls hnslletiev kgkgmaehyi aqlelqdlqe rykflkertk eavikaegll
     3421 tlhqeyqrnl kafevwleke qekldclshl dgdaqeqeat lrdlqelqvh caegqallna
     3481 avhareevip wgipqiedra leslrqdwqv yqhrlsears qlnatvsklr lmekkfqkvn
     3541 dwltnleekv airtgrrsgr atkemqlqlm kkcheditvy kddieevgvl aqqileenlt
     3601 asrmgsqatq ltsryqtlll hvleqvkfle eeircmeese lsfsaytnwy gatnknfknv
     3661 itkfdmvdkt vmekkvqkle vllsdmdigh sllksarekg eraikymeen evdqlrkeig
     3721 dhveqleela gsirkehmts ekclqlvkef sdkykaqtqw vmeyqailha pvepkselye
     3781 kkaqlskyks iqqtvlshep siksviekge alcdlvndva lknniqdlqs syqelcsktk
     3841 acvetlevrv kehedynsdl qegekwllhm ssrlaspdlm esnnleiitq qlanqkaime
     3901 eiagfedrln slkskgdyli sqcsehlqak fkqniqshlq gtrdsysaic staqrvyqtl
     3961 ehelqkhvnh qdtlqqcqtw lstvqselkp ttwtafslad avkqvkhfra lqeqantyld
     4021 llcsmcdlsd atvkstaadi qqtkqtieqq imhsqylsqg weeikqlkae lwiyfqdadq
     4081 qlqnlkrrra elelniaqnm vlqvkefsqk lqskqsalts vtekinkltq gqespehkei
     4141 gelsnqwldl clqahnllmq reedlqrtrd yhdrmnviev flekltkewd nlarsdaest
     4201 nvhlealqkl aialqerrfa ledlkdqkqk miehlnlddk elikeqfshf eqrwtqledl
     4261 vkrkiqvsvs tleelslvhs kfqelmewae eqqpsvseal kqspppdmaq sllmdhlsic
     4321 seleakqlvl kmlvkdadrv mtnlglnerq elqktvsdaq hhvaclsdlv gqrrkhlnka
     4381 lsektqflma vfeatnqihq hekkvmfpeh icllpedvnk qirtckntqa nlkayqnevt
     4441 glwaqgrdlm keatnqekse vlgklqelqn vydtvlqkcn qrllelekni vsrkyfkedl
     4501 dkachwlkqa divtfpevnv mnsntelysq lakyqqileq speyenllls lqrdgqevlp
     4561 slnevdhsyl deklnslpqq fntvtalake klykvqeaiy arkeyaslie ltskaltele
     4621 dqfinmdkap aavsakeavs lqqayrdlld eatslaaavd elnqkkeafr stgqpwqpde
     4681 mlklatlyhk lkrqieqkis llddtieacq ehekmcmqfe aqletvkkeq akvneetlpv
     4741 eeklkiyhsl mgslqdsesl lkritehlea lssqvdssay ettnhqvkaw qeklkslhsa
     4801 ivdtvmecen rlvqsidfkt eicrslewlr wvktelngtl sldlklqniq eeirkvqihq
     4861 eevqsslrim nalsnkeker ymkakelipa dlentlaela eldgevqeai hvrqatlnka
     4921 yslcqryyqv mqiandwled aqeflqlarn gldvenseen lrnhveffst esqfndhlkv
     4981 lqglvseiep flqataseql vqnvaaleek akgmeqeakt qqeqlqrcas ewqeyqtsrq
     5041 kvievmndae kklsefsvak aassheaeek lqthktlvsi vnsfhekita leekasqlek
     5101 isndaskasi srsmttvwqr wtrlrnvaqe qekiledavq ewkvfndkiq katiaidqlq
     5161 grlpessvek asktellell dyhgsfllev dhqlsslgll kqhavsmlqn vevkppsqke
     5221 lpvmqeikam qdrchnmqqk vkkgmkmvkq elkereevea einivkswiq etkeyllspd
     5281 aevdiqlqel qslfgevtth sqaveklaeq qqnkylglyt ilpselslhl aevglalvtv
     5341 qdqiqtkere tqqiktlnqe fdqkiqgian elntilsklk kktndiaqak leqkilgdel
     5401 dscnikllel dasvqdfaeq nlplakqlsn rigkltalhq qtirqaeyra aklsqaashl
     5461 eeynemlefi lkwiekanil vhgsitwnss sqlrdqfkay qsildesgei hgdleamser
     5521 idylasvyct egmsqqvlel grrteelqqv ikvqlpnlqd aakdmkkfei elralqaale
     5581 qaqatltspe lghlslkeql shrqhllsem eslkpkvqav qdcqsalrip eevvtslpmc
     5641 hsalrlqeea srlqhtaiqq cnimqeavvq yeqyeqemkh lqqmiesahr eiqnkpiats
     5701 niqelqvqis rneelaqkik gyqeqiasln skckmltmka khatmlltvt eveglsegme
     5761 eldsdllpah pthpsvvmmt agrchtllsp vteesgeegt nseissppac rspspvantd
     5821 asvnqdiayy qalsaeqlqt eaakiqpsts atqefyepgl essasakldd lqrswetlkn
     5881 visekqrtly ealerqqkyq dtlqsistkm ettemklnes lepakspesq maehqalmde
     5941 ilmlqeeise lqtslaqelv sepldaegad qmalqstltv laermatirm kasgkrqlle
     6001 eklneqleeq rqeqalqryr ceadeldhwl lstrasldta llpaeepmdm eaqlvdcqnm
     6061 lveieqkvva lselsvhnen llmegkahtk deaeqlavkl rtlkgsllel qrvlhdkqin
     6121 irqgslqeke esdldfissq spsvqewlaq arttrsqqqq stlqqqkele qeleeqknll
     6181 rsvacrggei ltqqsstegl sisekpdals eelvlegekp sseeqmkrkw eslyqefstk
     6241 qrllqkalek eqlqlysrpn rlipgmplyk eetqdedksl vspvlvelnq afedvsseag
     6301 rveetlhleq klydgvtats vwldgveeqv fvatallpee etetylckqe slakeikdit
     6361 eevdknknlf aqifpessdk rviiedtldc llrrltlles vvnqrcnqmk grlqqiitfk
     6421 ndlklmftsv adnkylllqk laeaadrpet eqmqvilqae eglkeldagi nelkkridkl
     6481 hvdqpsvqel skiqdkydel lmiigsrrsd lnqnmalkrq yeralqdlad lvetgqekma
     6541 gdqkmivssk eevqsllekh keyfqglesh miltetlfrk msslallket qshseimtra
     6601 savlklahkr gveleyilet wmhldedyqe ltrqlesveg niptvglvee tedrlrdrit
     6661 lfqhlrsnlt eyqpklyqvl ddgkrllfsv scselegqln qlgerwlsnt skvtkelhrl
     6721 etilkhwtry qsesneltqw lqsakerlef wsqqsltvpq eletvrdhln sflefskevd
     6781 tkssqkssvl stgnqllrlk kvdtaalrag lshietqwte lltqipavqe klhqlqmdki
     6841 psrhaitevm swislmenvi qqdeeniknv vgqkaiqgyv qkykgfkidl nckqltvdfv
     6901 nqsvlqissq dveskrsdkt dfaeqlgamn rrwqilqgli tekiqllesl qeswteyenn
     6961 vqclktwfet qekklkqqqn igdqasvqna lkdcqelees irtkekeven veqsglslvq
     7021 nkkeevasav mntlqeinhs wanldhmvsq lkillqsvld qwsiykvaye elngyltear
     7081 yslsrcyllt gsleavkvqv dklqslqdel ekqenslqkf gsvtnellke chppvtetlt
     7141 ntlkevnmrw nnllqevaer lrasrallql wqrykdchqq cssmvhqree qtnellktat
     7201 skdiaddevt swirdcndvl tdlktaqesl vvlqelgeel ksqveasaaa aiqsdhlsls
     7261 qnlstleqal rkqqaalqag vldyqtfakn levletwite aeetlkeqdp shssdvsaiq
     7321 srmeqlksqm lkfssmapdl drlnelgyrl plndkeikrm qnlnrhwsli ssqtterfsk
     7381 lqsfllqqqt flekcgtwmd llvqteqkla vevsgnyqrl leqqrehelf qaemfsrqqi
     7441 lhsiisdgqh lleqgqvddr defnlnltll snqwqgvirr aqqmrgiids rihqwqryre
     7501 maeklrkwll emscqpvtel gsapiplpqa rvlldevqlk ekvllrqqgs yiltveagkq
     7561 lllsadsgae avlqaeltei qerwkivstq leqqkkqlal llkdwekcek gigdsleklr
     7621 sfkkklsqpl pdhhdelhae qirckelena vegwtddlan lsllketlsv yisaddisil
     7681 seriellhrq weelchqvsl rrqqvserln ewavfseknk elcewltqme skvsqngdil
     7741 ieemieklkk dyqeeiavaq knkiqlqqmg erlakashes kaseieyklg kindrwqhll
     7801 dliaarvkkl ketlvavqql dknmsslrsw lahieselsk pivyetcdse eiqrklneqq
     7861 elqrdiekhs tgvasvlnlc evllhdcdac ateaecdsiq qatrnldrrw rnicamsmer
     7921 rlkieetwrl wqkflddysr feewlktser taafpsssgv lytvakeelk kfeafqrqvh
     7981 esltqlelin kqyrrlaren rtdsdgslkq mvhegnqrwd nlqkrvtsil rrlkhfigqr
     8041 eefetardsi lvwltemdlq ltniehfsec dvqakikqlk afqqeislnn nkieqiivqg
     8101 eqlieksepl daavieeeld elrrycqevf grveryhkkl irlpltddeh dlsdrevdld
     8161 esadlsdirw hdksadsvls phpssnlslp lsqplrsers grdtpasvds iplewdhdyd
     8221 lsrdletavs rvlhseedgg qekdfylrga agiadveipe tleayvtlte nalknisgep
     8281 galeahirql dkaldtsrfq iqqteniirs ktptgpelds tykgymkllg ecsgsidsvr
     8341 rlgyklkeee ekfsglinmn stetqtagvi erweliqaqa lskelrmkqn lqqwqqfnsd
     8401 lnsiwawlge teeeleklhr ldlstdiqti elrikklkel qkaidnrkai ilsinlcsse
     8461 ftqsdseesk klqerlsqmn vrwehvcsmi edwrsslqda liqcqdfhel shglllwlen
     8521 idrrkneivp inpnldseil qdhhrllmqi rrellesqlk vaslqdmscq llvnaegkdc
     8581 leakekvhvi gnrlklllke vtrhikdlek ildisssqle lsswssdeld tsgsvspvsg
     8641 rstpsrqrtp rgkcslsqpg psvssphsrs trggsgssps eagpvwrcps fflrvlraal
     8701 plqlllllli glaclvpmte edyscamann farsfhpmlk ymngpppl
//
LOCUS       XP_041326029            8744 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041326029
VERSION     XP_041326029.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470095.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8744
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8744
                     /product="nesprin-1 isoform X7"
                     /calculated_mol_wt=1005202
     Region          23..135
                     /region_name="CH_SYNE1_rpt1"
                     /note="first calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 and similar proteins;
                     cd21241"
                     /db_xref="CDD:409090"
     Site            order(28,32,86,88..89,92..93,95,104..112,117,119..120,
                     122..123,126..127,130)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409090"
     Region          174..282
                     /region_name="CH_SYNE1_rpt2"
                     /note="second calponin homology (CH) domain found in
                     synaptic nuclear envelope protein 1 (SYNE-1) and similar
                     proteins; cd21243"
                     /db_xref="CDD:409092"
     Site            order(179,183,233,235..236,239..240,242,251..259,266,
                     268..269,271..272,275..276,279)
                     /site_type="other"
                     /note="putative actin binding site [polypeptide binding]"
                     /db_xref="CDD:409092"
     Region          1263..2063
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1967..2176
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            2068..2073
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2203..2959
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3049..3255
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3155..3160
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3161..3372
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3263..3268
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3367..4031
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3804..4019
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3904..3909
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <4117..>4348
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          4329..4542
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(4435..4436,4438..4441)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4470..4654
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            4544..4549
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4581..5220
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          4980..5193
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            5083..5088
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          5148..5953
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5891..6106
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(5998..6000,6012..6014)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6722..6945
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6832..6837
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6840..7055
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6946..6951
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6960..7156
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7054..7059
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7064..7275
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7163..7168
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7279..7481
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7380..7385
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7383..7594
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7487..7492
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7593..7810
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7705..7710
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7707..7922
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7809..7814
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7926..8136
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8032..8037
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          8389..8608
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8496..8501
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8712..8743
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8744
                     /gene="SYNE1"
                     /coded_by="XM_041470095.1:339..26573"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 massrlvars rdianvmqrl qdeqesvqkr tftkwinthl akrnppmlvn dlfedikdgv
       61 mliallevls gqklpceqgr qlkrihwvan igtalkfleg rriklvnins tdiadgrpsi
      121 vlglvwtiil yfqieeltsn lpqlqplsss assvesvvss etasppskrk vvtkvqgsar
      181 kallkwlqyt aakqvgieik dfgqswrsgv afhsvihair pdlvdmekvr grsnrenlee
      241 aftiaeaelg iprlldpedv dvekpdeksv mtyvaqflky ypdphhtvtd vpendkedrl
      301 vlrdlkvwae qferdiaraq vaetslqeky qsykhfrvqy evkrkqfela tqsvrkdgkl
      361 sldqavvkqa wervtsrmld whihldkslp aplgtigawl yraeaalree vtvqqaheet
      421 antihrkleq hkdllknidg hkkafheihr trsvngvpvp hdqledmadr fnfvvsssel
      481 hllkmeflel kyrllsllvf aesklkswii kygrresvel llqnyisvie nskffeqyev
      541 tyqilkraae myakangsve evenvmkfms dttaqwrnls vevrsvrsml eevianwdry
      601 sstvaglqaw ledaekmlnq pehskkdffr hlphwiqqht amndagnfli etcdetisrd
      661 lkqqllllng rwrelfmqvk qyaradeldk mrkefvdgva hltafidgsn tkfsipvevs
      721 fhdvktfvqd lenikqklpa metqykavtr tvqlvtkevs qeeanemlgt vtrlkeqlgk
      781 vkeyssally ecqrllsple elekqithfy eslekvneii sildpetqpt tvlkqkaqdl
      841 vayqenckkd vsliernsqs ilqcvastev lqhfhqsifq kkvtqiqitf qnmvrkagew
      901 rknieansrl mkkfeesrae lekviqianc clkekgnpee llrkhseffn qldqrvlnaf
      961 lkacdeltdi lpeqeqhslq eavrklhrqw kdlqteapyh lihlkievqk skflvtveec
     1021 kaelarqnkv lsregnermi kehmlffgdk gsyhlcekrl qrmeelcqkl pvsdpvrgtl
     1081 essqrilkdl ksqidstymk ltehsdtwkg yksrfselan wissterelk kikenvndta
     1141 kykqckasvg eirkhihkhg enhswlksrl avltslcpdl eaketedelc klssdfkrll
     1201 dllaeientl gavgdcvqyk eevksaieel innskevqae aekildtesl lqaqqlllhh
     1261 qqrtrrlrak rqdvqkqisq akrlqieggl pstvredlqk legtlenmqq tmekreeqlq
     1321 vtinkweqfe rdketvvkyl nqassvleri lnfsslesls seldqtkels kqteamavqa
     1381 enlvknssei qlgsknkqsl qhqaksiqeq vkkmevtlee diksmemvkn kwdhfgnnfe
     1441 alsnwiaeqe keletletss ssldiqisqi kvinkeidgk itgisnleee akafsqfvts
     1501 gerahikakl tqvkryweel rdhaqrlegt itgnasaqqk yeeslkqvqq svsefeakla
     1561 epltscssaa atyaalqdct dlchtvekls nplaslsagv rkvankekaa qkvtalqqky
     1621 ekvlesakek qnllenllaq wqkqekelsa flawlegcea vgrpaepyvs adriklegel
     1681 lalqdlradi eshtcvyesl lqlneslfpt askqcvktik ekfeelderw kalpqivdkr
     1741 inflqslvae hgqfdelllr fsdwikqfla elqatseist adqqlaashn knhsmevesk
     1801 kqelqilkel veklgsfssp edqqtlqgkt edcfqifqea sqitsqrqea ldqlrmfldl
     1861 hsavsgvlhq lrqtvektgn mdkakselle kelngvikdl nklesdaisl dgsltkaqyh
     1921 lkhsisgqrt scramvdnlg veleavqnll gtkqseaeal galqrsfmer keqllksied
     1981 teekadkegl kettlqalqq rlrvfnqlde elnshqhelq wlmdkakqia qkditlapes
     2041 dkeinrlesl wkdtkkaiqe kkeqscvlid lmkeyqslks tvmkviesan sasvtksiwk
     2101 dhedvrrils kheaakndls dkqkdldtft nkgkhllael krvhncdsta lktdmnsvvd
     2161 kwldvserld enidrlsvsv slwddilktg deldgwcnkc isqlneginn fsnsqrmell
     2221 lkdfqsevkn kelkleqlss kiselkelth sqeppadlqf iesdlrqkle hakdisetak
     2281 etlkdfttqk mqlqkligqm tdwltqveet llscarnldp ealnklketq kdlqlqqssi
     2341 dstretlnsl crkyhsvele alggtvtlli kkyeavnllc srtqarmqes lekhflysmq
     2401 efqewfsgvk aavkessdrs gdskaieakl hdlqgvldsi segqkkldaa ckegeslygc
     2461 lpkpvvshiq eqiaksnqnf qefliqclnd kkaleacash lgnfedqykk lalwmhdmee
     2521 ristealgen kqlvsekkke vqkvekflee llnsrdsfdq lsqmaqalne eghgagrevr
     2581 lasqhltsyq nmvktvkekl rtcqlalqeh ltfeealqsm wswvkevqdk lassqstfgs
     2641 katlerrltq iqeilllkgd gevklnmaig kgeqalkssn eegqkviqte lqtlkdvwnd
     2701 vistsvnwqs cldsiisqwn dylerknqle qwlenldhkv eqplepqigl kekfaqldhf
     2761 qaivseiedh sgdlqqliek avelsektgd dsfgdaaqee lktqfnditt vakekmrkve
     2821 divkdhllyl davheftdwl hsakeelhrw sdasgdtpti qkklakinel vesrqsgagr
     2881 lsrvealapa akrgttaggc qllaaemqal qadwrqwees arrsqgglre llsrmalser
     2941 efaaqaarle eaaqrlagql aawarglapa dsrstdaevv eswrkeketl dalvkseqmt
     3001 deiktqlndl crfsrdlsth sskvsglike ynslclqask gcqskeqilq qrfrtafrdf
     3061 qqwlvnarvt takcfdvpqn iseasaslqk iqeflsesen gqqklnlvas kgellcsvlp
     3121 kekaeviqdk saaakedwkn fittlhqkks aleslkiqmk dfeataeplq ewltttektv
     3181 qgsssrlhdl pskrreqqkl qsvleeisch ehqlnrlkek aqqlweeqav sksfmrrvsq
     3241 lssqyltlsn ltkekvsrmd rivaehqqfs qsikdlqdwv adavhmldsy chptadksvl
     3301 dsrmlklegl lavkqekevq mkivltrges vlqntslegv pviegqlqnl kdswasllst
     3361 ciqcksqleg alskwtsyqe dvnqfsrwmd kvetsmnase rqyaelrekt aalskaklln
     3421 eevlshnsll etievkgkgm aehyiaqlel qdlqerykfl kertkeavik aeglltlhqe
     3481 yqrnlkafev wlekeqekld clshldgdaq eqeatlrdlq elqvhcaegq allnaavhar
     3541 eevipwgipq iedraleslr qdwqvyqhrl searsqlnat vsklrlmekk fqkvndwltn
     3601 leekvairtg rrsgratkem qlqlmkkche ditvykddie evgvlaqqil eenltasrmg
     3661 sqatqltsry qtlllhvleq vkfleeeirc meeselsfsa ytnwygatnk nfknvitkfd
     3721 mvdktvmekk vqklevllsd mdighsllks arekgeraik ymeenevdql rkeigdhveq
     3781 leelagsirk ehmtsekclq lvkefsdkyk aqtqwvmeyq ailhapvepk selyekkaql
     3841 skyksiqqtv lshepsiksv iekgealcdl vndvalknni qdlqssyqel csktkacvet
     3901 levrvkehed ynsdlqegek wllhmssrla spdlmesnnl eiitqqlanq kaimeeiagf
     3961 edrlnslksk gdylisqcse hlqakfkqni qshlqgtrds ysaicstaqr vyqtlehelq
     4021 khvnhqdtlq qcqtwlstvq selkpttwta fsladavkqv khfralqeqa ntyldllcsm
     4081 cdlsdatvks taadiqqtkq tieqqimhsq ylsqgweeik qlkaelwiyf qdadqqlqnl
     4141 krrraeleln iaqnmvlqvk efsqklqskq saltsvteki nkltqgqesp ehkeigelsn
     4201 qwldlclqah nllmqreedl qrtrdyhdrm nvievflekl tkewdnlars daestnvhle
     4261 alqklaialq errfaledlk dqkqkmiehl nlddkelike qfshfeqrwt qledlvkrki
     4321 qvsvstleel slvhskfqel mewaeeqqps vsealkqspp pdmaqsllmd hlsicselea
     4381 kqlvlkmlvk dadrvmtnlg lnerqelqkt vsdaqhhvac lsdlvgqrrk hlnkalsekt
     4441 qflmavfeat nqihqhekkv mfpehicllp edvnkqirtc kntqanlkay qnevtglwaq
     4501 grdlmkeatn qeksevlgkl qelqnvydtv lqkcnqrlle leknivsrky fkedldkach
     4561 wlkqadivtf pevnvmnsnt elysqlakyq qileqspeye nlllslqrdg qevlpslnev
     4621 dhsyldekln slpqqfntvt alakeklykv qeaiyarkey aslieltska lteledqfin
     4681 mdkapaavsa keavslqqay rdlldeatsl aaavdelnqk keafrstgqp wqpdemlkla
     4741 tlyhklkrqi eqkisllddt ieacqehekm cmqfeaqlet vkkeqakvne etlpveeklk
     4801 iyhslmgslq dsesllkrit ehlealssqv dssayettnh qvkawqeklk slhsaivdtv
     4861 mecenrlvqs idfkteicrs lewlrwvkte lngtlsldlk lqniqeeirk vqihqeevqs
     4921 slrimnalsn kekerymkak elipadlent laelaeldge vqeaihvrqa tlnkayslcq
     4981 ryyqvmqian dwledaqefl qlarngldve nseenlrnhv effstesqfn dhlkvlqglv
     5041 seiepflqat aseqlvqnva aleekakgme qeaktqqeql qrcasewqey qtsrqkviev
     5101 mndaekklse fsvakaassh eaeeklqthk tlvsivnsfh ekitaleeka sqlekisnda
     5161 skasisrsmt tvwqrwtrlr nvaqeqekil edavqewkvf ndkiqkatia idqlqgrlpe
     5221 ssvekaskte llelldyhgs fllevdhqls slgllkqhav smlqnvevkp psqkelpvmq
     5281 eikamqdrch nmqqkvkkgm kmvkqelker eeveaeiniv kswiqetkey llspdaevdi
     5341 qlqelqslfg evtthsqave klaeqqqnky lglytilpse lslhlaevgl alvtvqdqiq
     5401 tkeretqqik tlnqefdqki qgianelnti lsklkkktnd iaqakleqki lgdeldscni
     5461 klleldasvq dfaeqnlpla kqlsnrigkl talhqqtirq aeyraaklsq aashleeyne
     5521 mlefilkwie kanilvhgsi twnsssqlrd qfkayqsild esgeihgdle amseridyla
     5581 svyctegmsq qvlelgrrte elqqvikvql pnlqdaakdm kkfeielral qaaleqaqat
     5641 ltspelghls lkeqlshrqh llsemeslkp kvqavqdcqs alripeevvt slpmchsalr
     5701 lqeeasrlqh taiqqcnimq eavvqyeqye qemkhlqqmi esahreiqnk piatsniqel
     5761 qvqisrneel aqkikgyqeq iaslnskckm ltmkakhatm lltvtevegl segmeeldsd
     5821 llpahpthps vvmlqteaak iqpstsatqe fyepglessa saklddlqrs wetlknvise
     5881 kqrtlyeale rqqkyqdtlq sistkmette mklneslepa kspesqmaeh qalmdeilml
     5941 qeeiselqts laqelvsepl daegadqmal qstltvlaer matirmkasg krqlleekln
     6001 eqleeqrqeq alqryrcead eldhwllstr asldtallpa eepmdmeaql vdcqnmlvei
     6061 eqkvvalsel svhnenllme gkahtkdeae qlavklrtlk gsllelqrvl hdkqinirqg
     6121 slqekeesdl dfissqspsv qewlaqartt rsqqqqstlq qqkeleqele eqknllrsva
     6181 crggeiltqq ssteglsise kpdalseelv legekpssee qmkrkwesly qefstkqrll
     6241 qkalekeqlq lysrpnrlip gmplykeetq dedkslvspv lvelnqafed vsseagrvee
     6301 tlhleqklyd gvtatsvwld gveeqvfvat allpeeetet ylckqeslak eikditeevd
     6361 knknlfaqif pessdkrvii edtldcllrr ltllesvvnq rcnqmkgrlq qiitfkndlk
     6421 lmftsvadnk ylllqklaea adrpeteqmq vilqaeeglk eldaginelk kridklhvdq
     6481 psvqelskiq dkydellmii gsrrsdlnqn malkrqyera lqdladlvet gqekmagdqk
     6541 mivsskeevq sllekhkeyf qgleshmilt etlfrkmssl allketqshs eimtrasavl
     6601 klahkrgvel eyiletwmhl dedyqeltrq lesvegnipt vglveetedr lrdritlfqh
     6661 lrsnlteyqp klyqvlddgk rllfsvscse legqlnqlge rwlsntskvt kelhrletil
     6721 khwtryqses neltqwlqsa kerlefwsqq sltvpqelet vrdhlnsfle fskevdtkss
     6781 qkssvlstgn qllrlkkvdt aalraglshi etqwtelltq ipavqeklhq lqmdkipsrh
     6841 aitevmswis lmenviqqde eniknvvgqk aiqgyvqkyk gfkidlnckq ltvdfvnqsv
     6901 lqissqdves krsdktdfae qlgamnrrwq ilqgliteki qlleslqesw teyennvqcl
     6961 ktwfetqekk lkqqqnigdq asvqnalkdc qeleesirtk ekevenveqs glslvqnkke
     7021 evasavmntl qeinhswanl dhmvsqlkil lqsvldqwsi ykvayeelng yltearysls
     7081 rcylltgsle avkvqvdklq slqdelekqe nslqkfgsvt nellkechpp vtetltntlk
     7141 evnmrwnnll qevaerlras rallqlwqry kdchqqcssm vhqreeqtne llktatskdi
     7201 addevtswir dcndvltdlk taqeslvvlq elgeelksqv easaaaaiqs dhlslsqnls
     7261 tleqalrkqq aalqagvldy qtfaknlevl etwiteaeet lkeqdpshss dvsaiqsrme
     7321 qlksqmlkfs smapdldrln elgyrlplnd keikrmqnln rhwslissqt terfsklqsf
     7381 llqqqtflek cgtwmdllvq teqklavevs gnyqrlleqq rehelfqaem fsrqqilhsi
     7441 isdgqhlleq gqvddrdefn lnltllsnqw qgvirraqqm rgiidsrihq wqryremaek
     7501 lrkwllemsc qpvtelgsap iplpqarvll devqlkekvl lrqqgsyilt veagkqllls
     7561 adsgaeavlq aelteiqerw kivstqleqq kkqlalllkd wekcekgigd sleklrsfkk
     7621 klsqplpdhh delhaeqirc kelenavegw tddlanlsll ketlsvyisa ddisilseri
     7681 ellhrqweel chqvslrrqq vserlnewav fseknkelce wltqmeskvs qngdilieem
     7741 ieklkkdyqe eiavaqknki qlqqmgerla kasheskase ieyklgkind rwqhlldlia
     7801 arvkklketl vavqqldknm sslrswlahi eselskpivy etcdseeiqr klneqqelqr
     7861 diekhstgva svlnlcevll hdcdacatea ecdsiqqatr nldrrwrnic amsmerrlki
     7921 eetwrlwqkf lddysrfeew lktsertaaf psssgvlytv akeelkkfea fqrqvheslt
     7981 qlelinkqyr rlarenrtds dgslkqmvhe gnqrwdnlqk rvtsilrrlk hfigqreefe
     8041 tardsilvwl temdlqltni ehfsecdvqa kikqlkafqq eislnnnkie qiivqgeqli
     8101 eksepldaav ieeeldelrr ycqevfgrve ryhkklirlp ltddehdlsd revdldesad
     8161 lsdirwhdks adsvlsphps snlslplsqp lrsersgrdt pasvdsiple wdhdydlsrd
     8221 letavsrvlh seedggqekd fylrgaagia dveipetlea yvtltenalk nisgepgale
     8281 ahirqldkal dtsrfqiqqt eniirsktpt gpeldstykg ymkllgecsg sidsvrrlgy
     8341 klkeeeekfs glinmnstet qtagvierwe liqaqalske lrmkqnlqqw qqfnsdlnsi
     8401 wawlgeteee leklhrldls tdiqtielri kklkelqkai dnrkaiilsi nlcsseftqs
     8461 dseeskklqe rlsqmnvrwe hvcsmiedwr sslqdaliqc qdfhelshgl llwlenidrr
     8521 kneivpinpn ldseilqdhh rllmqirrel lesqlkvasl qdmscqllvn aegkdcleak
     8581 ekvhvignrl klllkevtrh ikdlekildi sssqlelssw ssdeldtsgs vspvsgrstp
     8641 srqrtprgkc slsqpgpsvs sphsrstrgg sgsspseagp vwrcpsfflr vlraalplql
     8701 llllliglac lvpmteedys camannfars fhpmlkymng pppl
//
LOCUS       XP_041326030            8319 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326030
VERSION     XP_041326030.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470096.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..8319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..8319
                     /product="nesprin-1 isoform X8"
                     /calculated_mol_wt=955959
     Region          779..1579
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          1483..1692
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            1584..1589
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          1719..2475
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2565..2771
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2671..2676
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2677..2888
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            2779..2784
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          2883..3547
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          3320..3535
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            3420..3425
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <3633..>3864
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          3845..4058
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(3951..3952,3954..3957)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          3986..4170
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            4060..4065
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          4097..4736
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          4557..5300
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          5466..5681
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            order(5573..5575,5587..5589)
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6297..6520
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cl02488"
                     /db_xref="CDD:413338"
     Site            6407..6412
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6415..6630
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6521..6526
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6535..6731
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6629..6634
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6639..6850
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6738..6743
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6854..7056
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            6955..6960
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          6958..7169
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7062..7067
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7168..7385
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7280..7285
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7282..7497
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7384..7389
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7501..7711
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            7607..7612
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          7964..8183
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            8071..8076
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <8287..8318
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..8319
                     /gene="SYNE1"
                     /coded_by="XM_041470096.1:112..25071"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 meflelkyrl lsllvfaesk lkswiikygr resvelllqn yisvienskf feqyevtyqi
       61 lkraaemyak angsveeven vmkfmsdtta qwrnlsvevr svrsmleevi anwdrysstv
      121 aglqawleda ekmlnqpehs kkdffrhlph wiqqhtamnd agnflietcd etisrdlkqq
      181 llllngrwre lfmqvkqyar adeldkmrke fvdgvahlta fidgsntkfs ipvevsfhdv
      241 ktfvqdleni kqklpametq ykavtrtvql vtkevsqeea nemlgtvtrl keqlgkvkey
      301 ssallyecqr llspleelek qithfyesle kvneiisild petqpttvlk qkaqdlvayq
      361 enckkdvsli ernsqsilqc vastevlqhf hqsifqkkvt qiqitfqnmv rkagewrkni
      421 eansrlmkkf eesraelekv iqiancclke kgnpeellrk hseffnqldq rvlnaflkac
      481 deltdilpeq eqhslqeavr klhrqwkdlq teapyhlihl kievqkskfl vtveeckael
      541 arqnkvlsre gnermikehm lffgdkgsyh lcekrlqrme elcqklpvsd pvrgtlessq
      601 rilkdlksqi dstymklteh sdtwkgyksr fselanwiss terelkkike nvndtakykq
      661 ckasvgeirk hihkhgenhs wlksrlavlt slcpdleake tedelcklss dfkrlldlla
      721 eientlgavg dcvqykeevk saieelinns kevqaeaeki ldtesllqaq qlllhhqqrt
      781 rrlrakrqdv qkqisqakrl qiegglpstv redlqklegt lenmqqtmek reeqlqvtin
      841 kweqferdke tvvkylnqas svlerilnfs sleslsseld qtkelskqte amavqaenlv
      901 knsseiqlgs knkqslqhqa ksiqeqvkkm evtleediks memvknkwdh fgnnfealsn
      961 wiaeqekele tletssssld iqisqikvin keidgkitgi snleeeakaf sqfvtsgera
     1021 hikakltqvk ryweelrdha qrlegtitgn asaqqkyees lkqvqqsvse feaklaeplt
     1081 scssaaatya alqdctdlch tveklsnpla slsagvrkva nkekaaqkvt alqqkyekvl
     1141 esakekqnll enllaqwqkq ekelsaflaw legceavgrp aepyvsadri klegellalq
     1201 dlradiesht cvyesllqln eslfptaskq cvktikekfe elderwkalp qivdkrinfl
     1261 qslvaehgqf delllrfsdw ikqflaelqa tseistadqq laashnknhs meveskkqel
     1321 qilkelvekl gsfsspedqq tlqgktedcf qifqeasqit sqrqealdql rmfldlhsav
     1381 sgvlhqlrqt vektgnmdka ksellekeln gvikdlnkle sdaisldgsl tkaqyhlkhs
     1441 isgqrtscra mvdnlgvele avqnllgtkq seaealgalq rsfmerkeql lksiedteek
     1501 adkeglkett lqalqqrlrv fnqldeelns hqhelqwlmd kakqiaqkdi tlapesdkei
     1561 nrleslwkdt kkaiqekkeq scvlidlmke yqslkstvmk viesansasv tksiwkdhed
     1621 vrrilskhea akndlsdkqk dldtftnkgk hllaelkrvh ncdstalktd mnsvvdkwld
     1681 vserldenid rlsvsvslwd dilktgdeld gwcnkcisql neginnfsns qrmelllkdf
     1741 qsevknkelk leqlsskise lkelthsqep padlqfiesd lrqklehakd isetaketlk
     1801 dfttqkmqlq kligqmtdwl tqveetllsc arnldpealn klketqkdlq lqqssidstr
     1861 etlnslcrky hsvelealgg tvtllikkye avnllcsrtq armqeslekh flysmqefqe
     1921 wfsgvkaavk essdrsgdsk aieaklhdlq gvldsisegq kkldaackeg eslygclpkp
     1981 vvshiqeqia ksnqnfqefl iqclndkkal eacashlgnf edqykklalw mhdmeerist
     2041 ealgenkqlv sekkkevqkv ekfleellns rdsfdqlsqm aqalneeghg agrevrlasq
     2101 hltsyqnmvk tvkeklrtcq lalqehltfe ealqsmwswv kevqdklass qstfgskatl
     2161 errltqiqei lllkgdgevk lnmaigkgeq alkssneegq kviqtelqtl kdvwndvist
     2221 svnwqsclds iisqwndyle rknqleqwle nldhkveqpl epqiglkekf aqldhfqaiv
     2281 seiedhsgdl qqliekavel sektgddsfg daaqeelktq fndittvake kmrkvedivk
     2341 dhllyldavh eftdwlhsak eelhrwsdas gdtptiqkkl akinelvesr qsgagrlsrv
     2401 ealapaakrg ttaggcqlla aemqalqadw rqweesarrs qgglrellsr malserefaa
     2461 qaarleeaaq rlagqlaawa rglapadsrs tdaevveswr keketldalv kseqmtdeik
     2521 tqlndlcrfs rdlsthsskv sglikeynsl clqaskgcqs keqilqqrfr tafrdfqqwl
     2581 vnarvttakc fdvpqnisea saslqkiqef lsesengqqk lnlvaskgel lcsvlpkeka
     2641 eviqdksaaa kedwknfitt lhqkksales lkiqmkdfea taeplqewlt ttektvqgss
     2701 srlhdlpskr reqqklqsvl eeischehql nrlkekaqql weeqavsksf mrrvsqlssq
     2761 yltlsnltke kvsrmdriva ehqqfsqsik dlqdwvadav hmldsychpt adksvldsrm
     2821 lklegllavk qekevqmkiv ltrgesvlqn tslegvpvie gqlqnlkdsw asllstciqc
     2881 ksqlegalsk wtsyqedvnq fsrwmdkvet smnaserqya elrektaals kakllneevl
     2941 shnslletie vkgkgmaehy iaqlelqdlq erykflkert keavikaegl ltlhqeyqrn
     3001 lkafevwlek eqekldclsh ldgdaqeqea tlrdlqelqv hcaegqalln aavhareevi
     3061 pwgipqiedr aleslrqdwq vyqhrlsear sqlnatvskl rlmekkfqkv ndwltnleek
     3121 vairtgrrsg ratkemqlql mkkcheditv ykddieevgv laqqileenl tasrmgsqat
     3181 qltsryqtll lhvleqvkfl eeeircmees elsfsaytnw ygatnknfkn vitkfdmvdk
     3241 tvmekkvqkl evllsdmdig hsllksarek geraikymee nevdqlrkei gdhveqleel
     3301 agsirkehmt sekclqlvke fsdkykaqtq wvmeyqailh apvepksely ekkaqlskyk
     3361 siqqtvlshe psiksviekg ealcdlvndv alknniqdlq ssyqelcskt kacvetlevr
     3421 vkehedynsd lqegekwllh mssrlaspdl mesnnleiit qqlanqkaim eeiagfedrl
     3481 nslkskgdyl isqcsehlqa kfkqniqshl qgtrdsysai cstaqrvyqt lehelqkhvn
     3541 hqdtlqqcqt wlstvqselk pttwtafsla davkqvkhfr alqeqantyl dllcsmcdls
     3601 datvkstaad iqqtkqtieq qimhsqylsq gweeikqlka elwiyfqdad qqlqnlkrrr
     3661 aelelniaqn mvlqvkefsq klqskqsalt svtekinklt qgqespehke igelsnqwld
     3721 lclqahnllm qreedlqrtr dyhdrmnvie vflekltkew dnlarsdaes tnvhlealqk
     3781 laialqerrf aledlkdqkq kmiehlnldd kelikeqfsh feqrwtqled lvkrkiqvsv
     3841 stleelslvh skfqelmewa eeqqpsvsea lkqspppdma qsllmdhlsi cseleakqlv
     3901 lkmlvkdadr vmtnlglner qelqktvsda qhhvaclsdl vgqrrkhlnk alsektqflm
     3961 avfeatnqih qhekkvmfpe hicllpedvn kqirtckntq anlkayqnev tglwaqgrdl
     4021 mkeatnqeks evlgklqelq nvydtvlqkc nqrllelekn ivsrkyfked ldkachwlkq
     4081 adivtfpevn vmnsntelys qlakyqqile qspeyenlll slqrdgqevl pslnevdhsy
     4141 ldeklnslpq qfntvtalak eklykvqeai yarkeyasli eltskaltel edqfinmdka
     4201 paavsakeav slqqayrdll deatslaaav delnqkkeaf rstgqpwqpd emlklatlyh
     4261 klkrqieqki sllddtieac qehekmcmqf eaqletvkke qakvneetlp veeklkiyhs
     4321 lmgslqdses llkritehle alssqvdssa yettnhqvka wqeklkslhs aivdtvmece
     4381 nrlvqsidfk teicrslewl rwvktelngt lsldlklqni qeeirkvqih qeevqsslri
     4441 mnalsnkeke rymkakelip adlentlael aeldgevqea ihvrqatlnk ayslcqryyq
     4501 vmqiandwle daqeflqlar ngldvensee nlrnhveffs tesqfndhlk vlqglvseie
     4561 pflqataseq lvqnvaalee kakgmeqeak tqqeqlqrca sewqeyqtsr qkvievmnda
     4621 ekklsefsva kaassheaee klqthktlvs ivnsfhekit aleekasqle kisndaskas
     4681 isrsmttvwq rwtrlrnvaq eqekiledav qewkvfndki qkatiaidql qgrlpessve
     4741 kasktellel ldyhgsflle vdhqlsslgl lkqhavsmlq nvevkppsqk elpvmqeika
     4801 mqdrchnmqq kvkkgmkmvk qelkereeve aeinivkswi qetkeyllsp daevdiqlqe
     4861 lqslfgevtt hsqaveklae qqqnkylgly tilpselslh laevglalvt vqdqiqtker
     4921 etqqiktlnq efdqkiqgia nelntilskl kkktndiaqa kleqkilgde ldscniklle
     4981 ldasvqdfae qnlplakqls nrigkltalh qqtirqaeyr aaklsqaash leeynemlef
     5041 ilkwiekani lvhgsitwns ssqlrdqfka yqsildesge ihgdleamse ridylasvyc
     5101 tegmsqqvle lgrrteelqq vikvqlpnlq daakdmkkfe ielralqaal eqaqatltsp
     5161 elghlslkeq lshrqhllse meslkpkvqa vqdcqsalri peevvtslpm chsalrlqee
     5221 asrlqhtaiq qcnimqeavv qyeqyeqemk hlqqmiesah reiqnkpiat sniqelqvqi
     5281 srneelaqki kgyqeqiasl nskckmltmk akhatmlltv teveglsegm eeldsdllpa
     5341 hpthpsvvmm tagrchtlls pvteesgeeg tnseissppa crspspvant dasvnqdiay
     5401 yqalsaeqlq teaakiqpst satqefyepg lessasakld dlqrswetlk nvisekqrtl
     5461 yealerqqky qdtlqsistk mettemklne slepakspes qmaehqalmd eilmlqeeis
     5521 elqtslaqel vsepldaega dqmalqstlt vlaermatir mkasgkrqll eeklneqlee
     5581 qrqeqalqry rceadeldhw llstrasldt allpaeepmd meaqlvdcqn mlveieqkvv
     5641 alselsvhne nllmegkaht kdeaeqlavk lrtlkgslle lqrvlhdkqi nirqgslqek
     5701 eesdldfiss qspsvqewla qarttrsqqq qstlqqqkel eqeleeqknl lrsvacrgge
     5761 iltqqssteg lsisekpdal seelvlegek psseeqmkrk weslyqefst kqrllqkale
     5821 keqlqlysrp nrlipgmply keetqdedks lvspvlveln qafedvssea grveetlhle
     5881 qklydgvtat svwldgveeq vfvatallpe eetetylckq eslakeikdi teevdknknl
     5941 faqifpessd krviiedtld cllrrltlle svvnqrcnqm kgrlqqiitf kndlklmfts
     6001 vadnkylllq klaeaadrpe teqmqvilqa eeglkeldag inelkkridk lhvdqpsvqe
     6061 lskiqdkyde llmiigsrrs dlnqnmalkr qyeralqdla dlvetgqekm agdqkmivss
     6121 keevqsllek hkeyfqgles hmiltetlfr kmsslallke tqshseimtr asavlklahk
     6181 rgveleyile twmhldedyq eltrqlesve gniptvglve etedrlrdri tlfqhlrsnl
     6241 teyqpklyqv lddgkrllfs vscselegql nqlgerwlsn tskvtkelhr letilkhwtr
     6301 yqsesneltq wlqsakerle fwsqqsltvp qeletvrdhl nsflefskev dtkssqkssv
     6361 lstgnqllrl kkvdtaalra glshietqwt elltqipavq eklhqlqmdk ipsrhaitev
     6421 mswislmenv iqqdeenikn vvgqkaiqgy vqkykgfkid lnckqltvdf vnqsvlqiss
     6481 qdveskrsdk tdfaeqlgam nrrwqilqgl itekiqlles lqeswteyen nvqclktwfe
     6541 tqekklkqqq nigdqasvqn alkdcqelee sirtkekeve nveqsglslv qnkkeevasa
     6601 vmntlqeinh swanldhmvs qlkillqsvl dqwsiykvay eelngyltea ryslsrcyll
     6661 tgsleavkvq vdklqslqde lekqenslqk fgsvtnellk echppvtetl tntlkevnmr
     6721 wnnllqevae rlrasrallq lwqrykdchq qcssmvhqre eqtnellkta tskdiaddev
     6781 tswirdcndv ltdlktaqes lvvlqelgee lksqveasaa aaiqsdhlsl sqnlstleqa
     6841 lrkqqaalqa gvldyqtfak nlevletwit eaeetlkeqd pshssdvsai qsrmeqlksq
     6901 mlkfssmapd ldrlnelgyr lplndkeikr mqnlnrhwsl issqtterfs klqsfllqqq
     6961 tflekcgtwm dllvqteqkl avevsgnyqr lleqqrehel fqaemfsrqq ilhsiisdgq
     7021 hlleqgqvdd rdefnlnltl lsnqwqgvir raqqmrgiid srihqwqryr emaeklrkwl
     7081 lemscqpvte lgsapiplpq arvlldevql kekvllrqqg syiltveagk qlllsadsga
     7141 eavlqaelte iqerwkivst qleqqkkqla lllkdwekce kgigdslekl rsfkkklsqp
     7201 lpdhhdelha eqirckelen avegwtddla nlsllketls vyisaddisi lseriellhr
     7261 qweelchqvs lrrqqvserl newavfsekn kelcewltqm eskvsqngdi lieemieklk
     7321 kdyqeeiava qknkiqlqqm gerlakashe skaseieykl gkindrwqhl ldliaarvkk
     7381 lketlvavqq ldknmsslrs wlahiesels kpivyetcds eeiqrklneq qelqrdiekh
     7441 stgvasvlnl cevllhdcda cateaecdsi qqatrnldrr wrnicamsme rrlkieetwr
     7501 lwqkflddys rfeewlktse rtaafpsssg vlytvakeel kkfeafqrqv hesltqleli
     7561 nkqyrrlare nrtdsdgslk qmvhegnqrw dnlqkrvtsi lrrlkhfigq reefetards
     7621 ilvwltemdl qltniehfse cdvqakikql kafqqeisln nnkieqiivq geqlieksep
     7681 ldaavieeel delrrycqev fgrveryhkk lirlpltdde hdlsdrevdl desadlsdir
     7741 whdksadsvl sphpssnlsl plsqplrser sgrdtpasvd siplewdhdy dlsrdletav
     7801 srvlhseedg gqekdfylrg aagiadveip etleayvtlt enalknisge pgaleahirq
     7861 ldkaldtsrf qiqqteniir sktptgpeld stykgymkll gecsgsidsv rrlgyklkee
     7921 eekfsglinm nstetqtagv ierweliqaq alskelrmkq nlqqwqqfns dlnsiwawlg
     7981 eteeeleklh rldlstdiqt ielrikklke lqkaidnrka iilsinlcss eftqsdsees
     8041 kklqerlsqm nvrwehvcsm iedwrsslqd aliqcqdfhe lshglllwle nidrrkneiv
     8101 pinpnldsei lqdhhrllmq irrellesql kvaslqdmsc qllvnaegkd cleakekvhv
     8161 ignrlklllk evtrhikdle kildisssql elsswssdel dtsgsvspvs grstpsrqrt
     8221 prgkcslsqp gpsvssphsr strggsgssp seagpvwrcp sfflrvlraa lplqllllll
     8281 iglaclvpmt eedyscaman nfarsfhpml kymngpppl
//
LOCUS       XP_041326031             973 aa            linear   VRT 06-MAY-2021
DEFINITION  nesprin-1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041326031
VERSION     XP_041326031.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470097.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..973
                     /product="nesprin-1 isoform X9"
                     /calculated_mol_wt=111557
     Region          43..251
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            152..157
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          155..365
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            261..266
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          618..837
                     /region_name="SPEC"
                     /note="Spectrin repeats, found in several proteins
                     involved in cytoskeletal structure; family members include
                     spectrin, alpha-actinin and dystrophin; the spectrin
                     repeat forms a three helix bundle with the second helix
                     interrupted by proline in some sequences; cd00176"
                     /db_xref="CDD:238103"
     Site            725..730
                     /site_type="active"
                     /note="linker region [active]"
                     /db_xref="CDD:238103"
     Region          <941..972
                     /region_name="KASH"
                     /note="Nuclear envelope localization domain; pfam10541"
                     /db_xref="CDD:463142"
     CDS             1..973
                     /gene="SYNE1"
                     /coded_by="XM_041470097.1:27..2948"
                     /db_xref="GeneID:121354975"
ORIGIN      
        1 mvvvedlhav rmaednsvds dlpdcncdit rvkklketlv avqqldknms slrswlahie
       61 selskpivye tcdseeiqrk lneqqelqrd iekhstgvas vlnlcevllh dcdacateae
      121 cdsiqqatrn ldrrwrnica msmerrlkie etwrlwqkfl ddysrfeewl ktsertaafp
      181 sssgvlytva keelkkfeaf qrqvhesltq lelinkqyrr larenrtdsd gslkqmvheg
      241 nqrwdnlqkr vtsilrrlkh figqreefet ardsilvwlt emdlqltnie hfsecdvqak
      301 ikqlkafqqe islnnnkieq iivqgeqlie ksepldaavi eeeldelrry cqevfgrver
      361 yhkklirlpl tddehdlsdr evdldesadl sdirwhdksa dsvlsphpss nlslplsqpl
      421 rsersgrdtp asvdsiplew dhdydlsrdl etavsrvlhs eedggqekdf ylrgaagiad
      481 veipetleay vtltenalkn isgepgalea hirqldkald tsrfqiqqte niirsktptg
      541 peldstykgy mkllgecsgs idsvrrlgyk lkeeeekfsg linmnstetq tagvierwel
      601 iqaqalskel rmkqnlqqwq qfnsdlnsiw awlgeteeel eklhrldlst diqtielrik
      661 klkelqkaid nrkaiilsin lcsseftqsd seeskklqer lsqmnvrweh vcsmiedwrs
      721 slqdaliqcq dfhelshgll lwlenidrrk neivpinpnl dseilqdhhr llmqirrell
      781 esqlkvaslq dmscqllvna egkdcleake kvhvignrlk lllkevtrhi kdlekildis
      841 ssqlelssws sdeldtsgsv spvsgrstps rqrtprgkcs lsqpgpsvss phsrstrggs
      901 gsspseagpv wrcpsfflrv lraalplqll lllliglacl vpmteedysc amannfarsf
      961 hpmlkymngp ppl
//
LOCUS       XP_041326032             399 aa            linear   VRT 06-MAY-2021
DEFINITION  vesicular inhibitory amino acid transporter-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326032
VERSION     XP_041326032.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470098.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..399
                     /product="vesicular inhibitory amino acid
                     transporter-like"
                     /calculated_mol_wt=44322
     Region          9..389
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..399
                     /gene="LOC121354976"
                     /coded_by="XM_041470098.1:1..1200"
                     /db_xref="GeneID:121354976"
ORIGIN      
        1 mvvtylaewt stftmqgifv lglpyallhs gysglllivl aaalccytgk iliaclyeen
       61 edgqvtrvrd tyedianacc kklspnlggv vvnvtqvvel imtcilylva sgnllshsfp
      121 yvpvtektws viafvtllpc ifirtlkivs klsqlcslvh fviifvvity cltqirqwsw
      181 akfrlslefe dflvsvgvii fsytsqiflp tlegnmknpg efrcmlnwth ffacifkttf
      241 altafltwge ktkevitdnl psfletlvnl clltkallsy plpffaatei vysciskdnh
      301 snyrspllal tvrgsflllt llmamftphf allmglsgsv tgaamtfllp slfhlklkwk
      361 klsflekcad isvfilgflc slagivcsik gllevfggv
//
LOCUS       XP_041326033            1695 aa            linear   VRT 06-MAY-2021
DEFINITION  NHS-like protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326033
VERSION     XP_041326033.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470099.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1695
                     /product="NHS-like protein 1"
                     /calculated_mol_wt=181476
     Region          309..947
                     /region_name="NHS"
                     /note="NHS-like; pfam15273"
                     /db_xref="CDD:464606"
     CDS             1..1695
                     /gene="NHSL1"
                     /coded_by="XM_041470099.1:1..5088"
                     /db_xref="GeneID:121354977"
ORIGIN      
        1 mpfplrtlep lklcrleeag gdgaerggpa pgdhagtaeg ggwrrrgavp lfgtleqvss
       61 yalvsllmql sdlsrcagdi fggilseads lchrnarlqr rlgaleella rldhrkvkip
      121 vsnldeesrw tvhytapwhq qenvflpssr ppcvedlhrq aklnlksvlr ecdklrrdgy
      181 rssqyysqgp tfsssssaic gsyqddyeei eqkcpvspse eeklitikrp kspatnelsd
      241 intqtnwtks lplptpeekm rqqaqavqtd vvpinvtvgt gqsdfrghsm yvpdhcstlg
      301 rldsyrsamq rsetkdtscq teevkvvpps mrriraqkgq giaaqmsqfs sssgnmsvms
      361 dsaavifasr qnndigfhsl prvgarvslq sldqtqsmms rqtediagtl phqisklqvd
      421 dsvvhlrsnp tvgtpsrpks qevrscdsek ssspacvvsp hatystsiip natlssssev
      481 ilihaaqnvg sldskmssst afpnprdnpa asnavsgked hhsssgnwse ssstrhsqts
      541 dtipsntvmm lslgdsavsl stpgnaeags qsmsyscrst aalaspsqds dgrsessysg
      601 eraqgavsst ehwlyksses setpsrkvvc ttpgcatpgs nlsssslert svrddstsly
      661 svdhdgyygs mhmdsglkad mpcnstngfe nprdsvinvf egkekkhqdd hsgqgdksla
      721 rnislkkakk pplppsrtds lrrmpkkkaq sngqildetl iatlqhslql nlkckngssp
      781 sqspcsdyed pwvlrsrsqs svsasssmms ttapnlysic tvtpsqsets sikseyadqw
      841 gyysdyaava ddqvkspvth sastssalsd yshfsdgsra svpqvpsgla kpksaspeks
      901 hrvtspssgy ssqsntptal tpvpvlvksa ssgngksklk pkvperkssl lssvsmssss
      961 tslssntste gsvsvkkldp alsppvdsga pplppplpts qhcpelsppp ppppaevmdl
     1021 splstsptfp ppppeasvss tfaqtvpwfp qeasissfss pvppppscpl avpppappld
     1081 pkitkgaaih pqysfkkrnq edscyspvkq plnkqdsrpv mplvttkalq mvqlrsvkks
     1141 tegelstesa settsqekgt vnsssqsllk pslslklsts lgdeemktqs tsfknavqtl
     1201 srgsplilsd ntpvldsdqk pvsavgvkks seadalgsat ddtpessvqs eelpsatslq
     1261 gspaspdktq vvlpskkppp iskkpklfll vpppqldltv ekaaevsdta rsptkrdavl
     1321 ahseearnrl tdglgssemd sgslvpegga agftfsetvg anafvvqpaa spvqeeprqe
     1381 eqsafdegss sgssqdsgsn tdghlsqene svevfesdta sssflpsssy geetdgvatp
     1441 arprttedlf aaihrskrkv lgrkdseddr trnhspsppv tptgaspnla tlkqagsiqr
     1501 svrksstsnd nfkalllkkg srcdtssrms aaemlkntdp rfhrtktdap pdlsdssasc
     1561 spskskraqe ewakseglmp rsmsfsgtry grsrtppsaa sskynvrnri qsspmtvise
     1621 gdgevveqse grvrrtleeq qegqldmfns demdmndfpy aeeagcketl dpdhvdlmtq
     1681 pgasrkylns saees
//
LOCUS       XP_041326034             649 aa            linear   VRT 06-MAY-2021
DEFINITION  mannosyl-oligosaccharide 1,2-alpha-mannosidase IA [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326034
VERSION     XP_041326034.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470100.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..649
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..649
                     /product="mannosyl-oligosaccharide 1,2-alpha-mannosidase
                     IA"
                     /calculated_mol_wt=71990
     Region          <116..170
                     /region_name="V-ATPase_G_2"
                     /note="Vacuolar (H+)-ATPase G subunit; pfam16999"
                     /db_xref="CDD:339878"
     Region          198..636
                     /region_name="Glyco_hydro_47"
                     /note="Glycosyl hydrolase family 47; pfam01532"
                     /db_xref="CDD:460241"
     CDS             1..649
                     /gene="MAN1A1"
                     /coded_by="XM_041470100.1:237..2186"
                     /db_xref="GeneID:121354978"
ORIGIN      
        1 mpaasllplf gsaagpgtlg gpagsgaggg grkaagpgaf rltekfvlll vfsafitlcf
       61 gaifflpdss kllsgvffhs aalqpppppp ggqprappqp gggpaaaaaa dgagslerir
      121 adheralrea ketlqklpee irrdirqdke kllqdargrk eagapglpqr lfrqpvgavg
      181 qepadpdvrq rrekikemmk hawdnykrya wglnelkpis kqghssnlfg niqgativda
      241 ldtlyimemk eefkeakewv eknldfnvna eisvfevnir fvggllsayy lsgeevfrkk
      301 avelgekllp afntptgipw allniksgig rnwpwasggs silaefgtlh lefvhlshls
      361 gnpvfaekvm nirkvlnrld kpeglypnyl npssgqwgqh hvsigglgds fyeyllkawl
      421 msdktdedgk kmyydavqai ethlirkssg gltyiaewkg gllehkmghl tcfaggmfal
      481 gadgapsdkt ghhielgaei artchesydr trmklgpeaf rfdggveaia trqnekyyil
      541 rpevietymy mwrlthdpky rewgweavea lekhcrvdgg ysgirdvynn heshddvqqs
      601 fflsetlkyl yllfseddll pfehwvfnte ahplpvlhkd dgtkeenqk
//
LOCUS       XP_041326035             157 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 242 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326035
VERSION     XP_041326035.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470101.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..157
                     /product="transmembrane protein 242 isoform X1"
                     /calculated_mol_wt=15966
     Region          30..140
                     /region_name="DUF1358"
                     /note="Protein of unknown function (DUF1358); pfam07096"
                     /db_xref="CDD:429291"
     CDS             1..157
                     /gene="TMEM242"
                     /coded_by="XM_041470101.1:53..526"
                     /db_xref="GeneID:121354979"
ORIGIN      
        1 mgaaaggaah egaaaaaple pgrglslprg agssaasqdk lflikggifl gtvatagmia
       61 gfgttlamtk kknpdwfnkg itataalpes gsslalralg wgslyawcgv gllsfaiwka
      121 lgvhsmkefq skmqsifpai pknsessvew enllksk
//
LOCUS       XP_041326036             129 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 242 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326036
VERSION     XP_041326036.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470102.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="transmembrane protein 242 isoform X2"
                     /calculated_mol_wt=12643
     Region          30..125
                     /region_name="DUF1358"
                     /note="Protein of unknown function (DUF1358); pfam07096"
                     /db_xref="CDD:429291"
     CDS             1..129
                     /gene="TMEM242"
                     /coded_by="XM_041470102.1:56..445"
                     /db_xref="GeneID:121354979"
ORIGIN      
        1 mgaaaggaah egaaaaaple pgrglslprg agssaasqdk lflikggifl gtvatagmia
       61 gfgttlamtk kknpdwfnkg itataalpes gsslalralg wgslyawcgv gllsfaiwka
      121 lgvhsvssk
//
LOCUS       XP_041326039             218 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-32 [Pyrgilauda ruficollis].
ACCESSION   XP_041326039
VERSION     XP_041326039.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470105.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..218
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..218
                     /product="ras-related protein Rab-32"
                     /calculated_mol_wt=24132
     Region          19..217
                     /region_name="Rab32_Rab38"
                     /note="Rab GTPase families 18 (Rab18) and 32 (Rab32);
                     cd04107"
                     /db_xref="CDD:206692"
     Site            19..20
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206692"
     Site            25..32
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206692"
     Site            order(27..33,43..44,49..50,77,136..137,139,167..169)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206692"
     Site            order(33..44,48..49)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206692"
     Site            order(43,48..56)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206692"
     Site            order(48,52..59,67,69)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206692"
     Site            50
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206692"
     Site            order(51,53..55,71,73,80..81,84,88,90..93,185)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206692"
     Site            order(51..52,54,73..74,81,83,85..87)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206692"
     Site            51..55
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206692"
     Site            69..73
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206692"
     Site            74..77
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206692"
     Site            order(77,79..89)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206692"
     Site            80..85
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206692"
     Site            88..92
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206692"
     Site            97..102
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206692"
     Site            129..133
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206692"
     Site            136..139
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206692"
     Site            167..169
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206692"
     Site            183..185
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206692"
     Site            215..217
                     /site_type="other"
                     /note="putative lipid modification site [posttranslational
                     modification]"
                     /db_xref="CDD:206692"
     CDS             1..218
                     /gene="RAB32"
                     /coded_by="XM_041470105.1:197..853"
                     /db_xref="GeneID:121354980"
ORIGIN      
        1 maggegagsg vpecrehlfk vlvigelgvg ktsiikryvh qlfsqhyrat igvdfalkvi
       61 nwdsktlvrl qlwdiagqer fgnmtrvyyk eavgafvvfd vtrgstfeav skwkhdldsk
      121 vllpngspip avllankcdq kkdgsqnpsq mdqfcreggf vgwfetsakd ninideaarf
      181 lvenilanyk tfpneendvg kpkldldplk aesksqcc
//
LOCUS       XP_041326040             240 aa            linear   VRT 06-MAY-2021
DEFINITION  cbp/p300-interacting transactivator 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326040
VERSION     XP_041326040.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470106.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..240
                     /product="cbp/p300-interacting transactivator 2"
                     /calculated_mol_wt=25842
     Region          1..240
                     /region_name="CITED"
                     /note="pfam04487"
                     /db_xref="CDD:461328"
     CDS             1..240
                     /gene="CITED2"
                     /coded_by="XM_041470106.1:282..1004"
                     /db_xref="GeneID:121354981"
ORIGIN      
        1 madhmmamnh grfpdgsggl hhhpahrmgm gqfptphhhh qqqqppqqha fsalmgdhih
       61 ygagsmnass gvrhamgpgs vsgghpagsm ppparfsgsq fmappvaspg gqlsasmqlq
      121 klnnqyfshh pyphshympd lhpgshqlng gsqqhfrdcn pkhgggggsg lppavphvpa
      181 amlppnvidt dfideevlms lviemgldri kelpelwlgq nefdfmtdfv ckqqpsrvsc
//
LOCUS       XP_041326041            1653 aa            linear   VRT 06-MAY-2021
DEFINITION  fibronectin type III domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326041
VERSION     XP_041326041.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470107.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1653
                     /product="fibronectin type III domain-containing protein
                     1"
                     /calculated_mol_wt=181038
     Region          109..198
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(187..188,190..191)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          205..291
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(287..288,290..291)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          388..>795
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1417..1508
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(1497..1498,1500..1501)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1653
                     /gene="FNDC1"
                     /coded_by="XM_041470107.1:56..5017"
                     /db_xref="GeneID:121354982"
ORIGIN      
        1 mpsrplrvra qspdgklpfr wkppygagfr gphsrsqgyp rgygesnrrm syapmpqerq
       61 nqearklase svhvvslpsr ssqgrsqpvy rssltkrkvt eeeevevaqd vtvrvmssqs
      121 vlvtwtdply ekrkvaasrq ynvryrekge sarwdykqvs nrralvenll pdtmyefaiq
      181 ilegekegkw svsvyqrtpe aapasapenl dvwplkgkpt svaaswdalp esegkvkeyi
      241 lsyapalkpf gaksitysga ttsaiidglq ageryifkir aanrrgpgpq skafsvvipa
      301 aahedsvaqq ktniqdnsea kktgnagssp sqsssvsska qlspsskqls vhspsvsdkk
      361 sllseyknki ltrgvlsksq lpsrktgeqe pdlqstevtd dgdssqeatt sppkaqdqrr
      421 nvkplfpsrp vhpvlasgkm sirthssevs sqmsteerep pallpsssqh ssasstpryt
      481 dnetkqlrqs nnnvpsktss hplpaksngn vegkpdpvlv kvsskasepg rqalpssrqa
      541 avplegvsgh rsrsgslgrs hqpasksads dahsshnefd seeaedrtgq pssrsqqirl
      601 ssgsssrtwk dsksavaavs srsavpgyts phsrsstsak skgkdvdkny kedsqdenpl
      661 lpslpssrqs ssaiyskrrn pqvdsdsrsr ethgeksphs dseeqqsqtv apekhsllqs
      721 slskykpeeq gnrevkekla rskpseslpr ktlssrlpve ktshsqppqr aqtspsilhs
      781 rgrrlpshra issqsneelq edddedeteg sdrasrhsvf lkevsssrgl sasfsqgsss
      841 ssqskqqqpg sqvpsykpkh tqpdsssasd takdnqynqr lshtsrqtrp slptrsgvta
      901 rtvsqtekkk gllpskmsnt ellqkvpsps sskshqsvsn eeddyysehd qnemeekpts
      961 laakqspsvs rgnknvyedt asnkrksmdt llphkvssee eetekpsilk msspesprss
     1021 aiasqitqss nkhtpskpsf vwprssastt thtispavss tlsprqrlln srlgspsqrq
     1081 fvrppyrpgy ngrpnlttkn gngngkvntg nngkpsgqkv ingpqgakwi vdldrglvln
     1141 aegkylqdsq gnplrvklgg dgrtivdekg apmvspdglp lfghsrfskp vasaqdkpii
     1201 slggkpligl emikktttps tttttipttt tttttttttt tvattttttt pepttteppt
     1261 ekptptcppg tygeyddegn lllgfdglpe cnaedtfsgl dsdvtatpea yaiydddyef
     1321 festlppttt tvttttaptt teleivypet svggtgpvse ydiagkkrft apyvtylnkd
     1381 paapcsltea lehfqvesla eiipndfgek eqrplkaphn itvvavegch sfvivdwakp
     1441 aqgdmvtgyl vysasyddfl knkwstrtag sthlpienlk pntryyfkvq aknpfgygpv
     1501 sssvsfites dnpllivrpp ggepiwipft fkydptysdc tgkqyvkrtw yrkfvgvvlc
     1561 nslrykiyls ddlkdtfysi gdswgrgedh cqfvdshldg rtgpqsyiea lptirgyyrq
     1621 yrqepvsfgr igyttpyyyv gwyecgvpip gkw
//
LOCUS       XP_041326042             273 aa            linear   VRT 06-MAY-2021
DEFINITION  oligodendrocyte transcription factor 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326042
VERSION     XP_041326042.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470108.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..273
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..273
                     /product="oligodendrocyte transcription factor 3"
                     /calculated_mol_wt=29501
     Region          71..151
                     /region_name="bHLH_TS_OLIG3"
                     /note="basic helix-loop-helix (bHLH) domain found in
                     oligodendrocyte transcription factor 3 (Oligo3) and
                     similar proteins; cd18941"
                     /db_xref="CDD:381511"
     Site            order(87,91,93..95,97,102,122..125)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381511"
     Site            order(100..101,104..105,107..108,126,129,133,135..136,140,
                     142..143)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381511"
     CDS             1..273
                     /gene="OLIG3"
                     /coded_by="XM_041470108.1:1..822"
                     /db_xref="GeneID:121354983"
ORIGIN      
        1 mnsdsssvss rasspdmdem ylrdhhhhhh hhhhqdsrln svsstqndlv qkmsgegltr
       61 ngskaggegs kykikkqlse qdlqqlrlki ngrerkrmhd lnlamdglre vmpyahgpsv
      121 rklskiatll larnyilmlt ssleemkrlv geiygghhsa fhcgtvghsa ghpphaagtv
      181 hqvhpilgsa lssantsssl saslpaigti rpphsllktp stppalqlgs gfqhwaglpc
      241 pcticqmppp phlsaltasn marisgetkd llk
//
LOCUS       XP_041326043             239 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-22 receptor subunit alpha-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326043
VERSION     XP_041326043.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470109.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..239
                     /product="interleukin-22 receptor subunit alpha-2"
                     /calculated_mol_wt=27869
     Region          3..120
                     /region_name="Tissue_fac"
                     /note="Tissue factor; pfam01108"
                     /db_xref="CDD:460067"
     Region          132..236
                     /region_name="Interfer-bind"
                     /note="Interferon-alpha/beta receptor, fibronectin type
                     III; pfam09294"
                     /db_xref="CDD:462746"
     CDS             1..239
                     /gene="IL22RA2"
                     /coded_by="XM_041470109.1:23..742"
                     /db_xref="GeneID:121354984"
ORIGIN      
        1 mrrimlsflc llmhllqdet tsllvlenqd lqdaikpqkv efhslnfntt lhwqpgware
       61 ardalyfvqy kvygqstwqn kdecwgissh vcdlthetsd iqepyysrvr aalagvysnw
      121 slsrrftpwr etmigppmvt vihsnksitv klqaprspyr rkrgskipmt nyydllyqvf
      181 iinnlldeqh rvlvyegkdk vvkiedlrpg vsycivakmy mplldhssay ssrqctvlq
//
LOCUS       XP_041326044             291 aa            linear   VRT 06-MAY-2021
DEFINITION  iodotyrosine deiodinase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326044
VERSION     XP_041326044.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470110.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="iodotyrosine deiodinase 1"
                     /calculated_mol_wt=33316
     Region          95..287
                     /region_name="iodotyrosine_dehalogenase"
                     /note="iodotyrosine dehalogenase; cd02144"
                     /db_xref="CDD:380320"
     Site            order(95..96,99..105,114..117,119..124,128..129,133..144,
                     147,199,214,216..217,220..221,223..225,227..229,231..236,
                     239,241..242,253..255,262..263,269..270,278..284,286..287)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:380320"
     Site            order(102..104,106,129..133,214,217..218,221,238..241,263,
                     279,281)
                     /site_type="other"
                     /note="FMN binding site [chemical binding]"
                     /db_xref="CDD:380320"
     CDS             1..291
                     /gene="IYD"
                     /coded_by="XM_041470110.1:109..984"
                     /db_xref="GeneID:121354985"
ORIGIN      
        1 malfssltpl fiaiicvlig vimkktngek ekrdtkskhp srpwvdedlk dgtdhpleee
       61 egeeewqgle envahvpftg eryseaemik rsqtfyelln krrsvrflsd epvprevidn
      121 virtagtsps gahtepwtfv vvqdpylkhk ireiveeeee inykkrmgdr wvndlkrlrt
      181 nwikeyldta pylilifkqv ygrlpngkkk thyyneisvs iacgillaal qnaglytvts
      241 tplncgpqlr vllqrpanek lllllpvgyp kkdatvpalt rkpledimvv m
//
LOCUS       XP_041326045             472 aa            linear   VRT 06-MAY-2021
DEFINITION  protein LTV1 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041326045
VERSION     XP_041326045.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470111.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..472
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..472
                     /product="protein LTV1 homolog"
                     /calculated_mol_wt=54309
     Region          15..359
                     /region_name="LTV"
                     /note="Low temperature viability protein; pfam04180"
                     /db_xref="CDD:461211"
     CDS             1..472
                     /gene="LTV1"
                     /coded_by="XM_041470111.1:282..1700"
                     /db_xref="GeneID:121354986"
ORIGIN      
        1 mphkkkkpfi ekkkavtfhl vhrsqrdpla addtapqrvl lptqkgheeq rreeqrkygv
       61 ffdddydylq hlkeasgpse lvpsvrgqqs rivitseghi edeiqrisap siklpssvfa
      121 tefeedvgll nkaapvsgpr ldfdpdivaa ldddfdfdnp enileddfvl qankpqkrgp
      181 daededewed meddsdekds cstdkdydse gplsdgevng qtkeflfmqe etrsrfteys
      241 mtssvirrne qltllddrfe kfyeqfdede igaldnvele gyintdnarl qevlddyyke
      301 kakncvklda lepdedldsp aneeseeeke eivtvvieep kekwdcesil stysnlynhp
      361 tlikepskpk pikisqktgi pldilpqkgl takqvermqm ingsdlpkas tqprskaesk
      421 eyrkarkqai keerkerrme kkanklafkq ektrqekell nlkqnvqglk ls
//
LOCUS       XP_041326046             908 aa            linear   VRT 06-MAY-2021
DEFINITION  ectonucleotide pyrophosphatase/phosphodiesterase family member 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326046
VERSION     XP_041326046.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470112.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..908
                     /product="ectonucleotide pyrophosphatase/phosphodiesterase
                     family member 1 isoform X1"
                     /calculated_mol_wt=103041
     Region          86..126
                     /region_name="SO"
                     /note="Somatomedin B -like domains; smart00201"
                     /db_xref="CDD:197571"
     Region          129..169
                     /region_name="Somatomedin_B"
                     /note="Somatomedin B domain; pfam01033"
                     /db_xref="CDD:460034"
     Region          194..520
                     /region_name="Phosphodiest"
                     /note="Type I phosphodiesterase / nucleotide
                     pyrophosphatase; pfam01663"
                     /db_xref="CDD:396300"
     Site            order(200,237..238,259,358,362,405..406,517)
                     /site_type="active"
                     /db_xref="CDD:293742"
     Site            order(200,237..238,259,358,362,406,517)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293742"
     Site            542..544
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293742"
     Region          660..891
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; smart00477"
                     /db_xref="CDD:214683"
     Site            order(722..723,725,763,767)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(722..723,767)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     CDS             1..908
                     /gene="ENPP1"
                     /coded_by="XM_041470112.1:145..2871"
                     /db_xref="GeneID:121354988"
ORIGIN      
        1 mqgngqqagk gheehldgvg aadgglqtaa vpmlpameva eepekppggk skdpntykvl
       61 slvlcvcmlt tilgcifglk pscskdvktc kgrcfertfg scrcdkdcvk lgnccldyqe
      121 tciqpahiwt cnkfrcgekr rleyrcscsd dcvenndccv nyqavckgea swveeeceni
      181 tepqcpkgft kspvllfsld gfraeylqtw ggllpviskl qkcgtytssm rpvypsktfp
      241 nhysivtgly peshgiidnk mydpkrnasf tlkseekfnp qwyqgqpiwl tamyqglkag
      301 tffwpgsdva vngtfpnlye iynssipfee rvvtvlrwlq lpederphfy tlyleepdss
      361 ghkfgpvssg vimalqrvdk ivgmlmdglk qmnlhkclni ifisdhgmev gscrktayln
      421 syldnvqdfi vvpgpaarlr pnnvpdeyfs fnyegivrnl tcikpnqpfk aymkqllpkr
      481 fhysyndrie plhfyldsqw qlarkpleik sckggfhgsd nrfpnmqaif igfgpgfksg
      541 tqvdpfenie vynlmcdllg vkpapnngth grlnhllkhp vytphhpket shpsecsvvr
      601 erafsvslgc scrtaglpir dfhqrlnfte tevektkeln lpygrprvlq kkhnycllyh
      661 yryvsgysrd yrmalwsayt lgrddqwvss tgaasnclhn dvrisqnhnq tclfynnhph
      721 ltygflappn fmtdakkphy dalltsnivp mypafkvlwn yfhqhllpey aaarngvnvv
      781 sgpvfdydsd glydtpeklk rylgnsevpv pthffivlts ckntsetple cegsldalsf
      841 ivphrednse scadgksest wveermkfht arirdiellt glsfyqdrkq pisdilqlkt
      901 ylptfetv
//
LOCUS       XP_041326047             732 aa            linear   VRT 06-MAY-2021
DEFINITION  ectonucleotide pyrophosphatase/phosphodiesterase family member 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326047
VERSION     XP_041326047.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470113.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="ectonucleotide pyrophosphatase/phosphodiesterase
                     family member 1 isoform X2"
                     /calculated_mol_wt=84154
     Region          72..344
                     /region_name="Phosphodiest"
                     /note="Type I phosphodiesterase / nucleotide
                     pyrophosphatase; pfam01663"
                     /db_xref="CDD:396300"
     Site            366..368
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293742"
     Region          484..715
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; smart00477"
                     /db_xref="CDD:214683"
     Site            order(546..547,549,587,591)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(546..547,591)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     CDS             1..732
                     /gene="ENPP1"
                     /coded_by="XM_041470113.1:190..2388"
                     /db_xref="GeneID:121354988"
ORIGIN      
        1 mivwkttiav liiklfvker qaglkksvrt llnlsvrkdl pslqccyfhw masernicrl
       61 gvdfylllan yglypeshgi idnkmydpkr nasftlksee kfnpqwyqgq piwltamyqg
      121 lkagtffwpg sdvavngtfp nlyeiynssi pfeervvtvl rwlqlpeder phfytlylee
      181 pdssghkfgp vssgvimalq rvdkivgmlm dglkqmnlhk clniifisdh gmevgscrkt
      241 aylnsyldnv qdfivvpgpa arlrpnnvpd eyfsfnyegi vrnltcikpn qpfkaymkql
      301 lpkrfhysyn drieplhfyl dsqwqlarkp leiksckggf hgsdnrfpnm qaifigfgpg
      361 fksgtqvdpf enievynlmc dllgvkpapn ngthgrlnhl lkhpvytphh pketshpsec
      421 svvrerafsv slgcscrtag lpirdfhqrl nftetevekt kelnlpygrp rvlqkkhnyc
      481 llyhyryvsg ysrdyrmalw saytlgrddq wvsstgaasn clhndvrisq nhnqtclfyn
      541 nhphltygfl appnfmtdak kphydallts nivpmypafk vlwnyfhqhl lpeyaaarng
      601 vnvvsgpvfd ydsdglydtp eklkrylgns evpvpthffi vltsckntse tplecegsld
      661 alsfivphre dnsescadgk sestwveerm kfhtarirdi elltglsfyq drkqpisdil
      721 qlktylptfe tv
//
LOCUS       XP_041326048             409 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial fission regulator 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326048
VERSION     XP_041326048.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470114.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="mitochondrial fission regulator 2 isoform X1"
                     /calculated_mol_wt=44690
     Region          70..311
                     /region_name="Mito_fiss_reg"
                     /note="Mitochondrial fission regulator; pfam05308"
                     /db_xref="CDD:461620"
     CDS             1..409
                     /gene="MTFR2"
                     /coded_by="XM_041470114.1:31..1260"
                     /db_xref="GeneID:121354990"
ORIGIN      
        1 mallllqllr rllrylgwph hqaaffeihv fgssisralg tclpsavssg rhfqqlyavi
       61 rkyqakvtsv cqkkeygstr svvrrlgtil slepyprpyf qfvqdpsplg ydeqsaapap
      121 vapsladvlw vandegqact rlrtelrrre ksaappdpyp rldsiqcipk ncaqkvgvdq
      181 aalqkisale deltflraqi aaivsvqtlg svpsqafktl stpdgfhplp amtstplsvs
      241 hnhfvipspp plpsgapsgv dasnsaleli kqrraarnsd saaanstdhq rtknfpsmmd
      301 vlkdlnkvql raverspggt plsrpkkmqs sdwdpvavlt halkqkfahk nydeddsldk
      361 ennsfdsspf sspevpvvgr cslkpnakps ltgtdgvkqm pawkaraqi
//
LOCUS       XP_041326050             409 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial fission regulator 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326050
VERSION     XP_041326050.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470116.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="mitochondrial fission regulator 2 isoform X1"
                     /calculated_mol_wt=44690
     Region          70..311
                     /region_name="Mito_fiss_reg"
                     /note="Mitochondrial fission regulator; pfam05308"
                     /db_xref="CDD:461620"
     CDS             1..409
                     /gene="MTFR2"
                     /coded_by="XM_041470116.1:31..1260"
                     /db_xref="GeneID:121354990"
ORIGIN      
        1 mallllqllr rllrylgwph hqaaffeihv fgssisralg tclpsavssg rhfqqlyavi
       61 rkyqakvtsv cqkkeygstr svvrrlgtil slepyprpyf qfvqdpsplg ydeqsaapap
      121 vapsladvlw vandegqact rlrtelrrre ksaappdpyp rldsiqcipk ncaqkvgvdq
      181 aalqkisale deltflraqi aaivsvqtlg svpsqafktl stpdgfhplp amtstplsvs
      241 hnhfvipspp plpsgapsgv dasnsaleli kqrraarnsd saaanstdhq rtknfpsmmd
      301 vlkdlnkvql raverspggt plsrpkkmqs sdwdpvavlt halkqkfahk nydeddsldk
      361 ennsfdsspf sspevpvvgr cslkpnakps ltgtdgvkqm pawkaraqi
//
LOCUS       XP_041326051             409 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial fission regulator 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326051
VERSION     XP_041326051.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470117.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="mitochondrial fission regulator 2 isoform X1"
                     /calculated_mol_wt=44690
     Region          70..311
                     /region_name="Mito_fiss_reg"
                     /note="Mitochondrial fission regulator; pfam05308"
                     /db_xref="CDD:461620"
     CDS             1..409
                     /gene="MTFR2"
                     /coded_by="XM_041470117.1:31..1260"
                     /db_xref="GeneID:121354990"
ORIGIN      
        1 mallllqllr rllrylgwph hqaaffeihv fgssisralg tclpsavssg rhfqqlyavi
       61 rkyqakvtsv cqkkeygstr svvrrlgtil slepyprpyf qfvqdpsplg ydeqsaapap
      121 vapsladvlw vandegqact rlrtelrrre ksaappdpyp rldsiqcipk ncaqkvgvdq
      181 aalqkisale deltflraqi aaivsvqtlg svpsqafktl stpdgfhplp amtstplsvs
      241 hnhfvipspp plpsgapsgv dasnsaleli kqrraarnsd saaanstdhq rtknfpsmmd
      301 vlkdlnkvql raverspggt plsrpkkmqs sdwdpvavlt halkqkfahk nydeddsldk
      361 ennsfdsspf sspevpvvgr cslkpnakps ltgtdgvkqm pawkaraqi
//
LOCUS       XP_041326052             406 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial fission regulator 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326052
VERSION     XP_041326052.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470118.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..406
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..406
                     /product="mitochondrial fission regulator 2 isoform X2"
                     /calculated_mol_wt=44395
     Region          70..311
                     /region_name="Mito_fiss_reg"
                     /note="Mitochondrial fission regulator; pfam05308"
                     /db_xref="CDD:461620"
     CDS             1..406
                     /gene="MTFR2"
                     /coded_by="XM_041470118.1:31..1251"
                     /db_xref="GeneID:121354990"
ORIGIN      
        1 mallllqllr rllrylgwph hqaaffeihv fgssisralg tclpsavssg rhfqqlyavi
       61 rkyqakvtsv cqkkeygstr svvrrlgtil slepyprpyf qfvqdpsplg ydeqsaapap
      121 vapsladvlw vandegqact rlrtelrrre ksaappdpyp rldsiqcipk ncaqkvgvdq
      181 aalqkisale deltflraqi aaivsvqtlg svpsqafktl stpdgfhplp amtstplsvs
      241 hnhfvipspp plpsgapsgv dasnsaleli kqrraarnsd saaanstdhq rtknfpsmmd
      301 vlkdlnkvql raverspggt plsrpkkmqs sdwdpvavlt halkqkfahk nydeddsldk
      361 ennsfdsspf sspevgrcsl kpnakpsltg tdgvkqmpaw karaqi
//
LOCUS       XP_041326053             238 aa            linear   VRT 06-MAY-2021
DEFINITION  androgen-induced gene 1 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041326053
VERSION     XP_041326053.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470119.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..238
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..238
                     /product="androgen-induced gene 1 protein"
                     /calculated_mol_wt=27182
     Region          12..219
                     /region_name="Far-17a_AIG1"
                     /note="FAR-17a/AIG1-like protein; pfam04750"
                     /db_xref="CDD:428104"
     CDS             1..238
                     /gene="AIG1"
                     /coded_by="XM_041470119.1:163..879"
                     /db_xref="GeneID:121354991"
ORIGIN      
        1 malvpcqvlh aaillsycsi lcnykaidmp ahqtyggswk fltfidlviq avffgicvlt
       61 dlsslltrgn dsqeqerqlk klislrdwmm avlafpvgvf vvmmfwsiyi ydrelvypkl
      121 ldnfipawln hgmhttvlpf vliemrtthh qypsrscgla avctfavgyi lwvcwihhvt
      181 gvwvyplleh lspgvkiiff aavtiiinvf ylvgevlnny iwdtqkctee gkekpkle
//
LOCUS       XP_041326054             785 aa            linear   VRT 06-MAY-2021
DEFINITION  centrosomal protein of 85 kDa-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326054
VERSION     XP_041326054.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470120.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..785
                     /product="centrosomal protein of 85 kDa-like isoform X1"
                     /calculated_mol_wt=88661
     Region          <427..>680
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..785
                     /gene="CEP85L"
                     /coded_by="XM_041470120.1:235..2592"
                     /db_xref="GeneID:121354992"
ORIGIN      
        1 mwgglhpqpg lrgykagsdy ssvgwlpgte slwqsstiss snqnnpvrrh siasdsgdtg
       61 igtscsdsve dhstssgtss fkpsrslvsi ptahvmlssa ssslskhrea fksdgskwst
      121 sfvrsgggrn qgaldnsldm kdarpvrkws slsklsspnn fsqdgsshsv eyragtdkav
      181 ppqlrtngps clhdsmellk iedkemgkkr sslldckykf etcskddfvs dspsrrhald
      241 ltysalpesk paaggceafg qryatlgqqa vsgapiqpav rtqmwlkeql ranpldcrpa
      301 eepygvpawh mqqledfrva gdqpvqvspg tsrsnypats yqdssnwesl mkikegllrq
      361 kefvidrqnq qinslhqkir eneiraqhar lshlvnceep yltnlqqpqy estalqphis
      421 ersashleel erkiaaaesk elqlseivkq lsnksseekk kmeeklktrd ryinslkkkc
      481 qketeqnkek qrrietleky ladlptlddi egqtkqlqil eeknkqlqet maelekklge
      541 arsqcrerel qlasqkkkek elvttvqslq qkvekcledg vrlpmldtkq lqseneslke
      601 knekaskiid nqqnqitgli ldmqsmqekl sqekliiqkm tneleekerh ieqlnktlse
      661 nqrlmeenac lkeqmrlveq srqpvsekmp vadqlfkems hclfdlkalc siltqraqgk
      721 epnlslllgi rslscssees enyhstetls kklsdvcqlr keidelrtim sdryaqdmgd
      781 ncitq
//
LOCUS       XP_041326055             690 aa            linear   VRT 06-MAY-2021
DEFINITION  centrosomal protein of 85 kDa-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326055
VERSION     XP_041326055.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470121.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..690
                     /product="centrosomal protein of 85 kDa-like isoform X2"
                     /calculated_mol_wt=78756
     Region          <332..>585
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..690
                     /gene="CEP85L"
                     /coded_by="XM_041470121.1:340..2412"
                     /db_xref="GeneID:121354992"
ORIGIN      
        1 mlssasssls khreafksdg skwstsfvrs gggrnqgald nsldmkdarp vrkwsslskl
       61 sspnnfsqdg sshsveyrag tdkavppqlr tngpsclhds mellkiedke mgkkrsslld
      121 ckykfetcsk ddfvsdspsr rhaldltysa lpeskpaagg ceafgqryat lgqqavsgap
      181 iqpavrtqmw lkeqlranpl dcrpaeepyg vpawhmqqle dfrvagdqpv qvspgtsrsn
      241 ypatsyqdss nweslmkike gllrqkefvi drqnqqinsl hqkireneir aqharlshlv
      301 nceepyltnl qqpqyestal qphisersas hleelerkia aaeskelqls eivkqlsnks
      361 seekkkmeek lktrdryins lkkkcqkete qnkekqrrie tlekyladlp tlddiegqtk
      421 qlqileeknk qlqetmaele kklgearsqc rerelqlasq kkkekelvtt vqslqqkvek
      481 cledgvrlpm ldtkqlqsen eslkekneka skiidnqqnq itglildmqs mqeklsqekl
      541 iiqkmtnele ekerhieqln ktlsenqrlm eenaclkeqm rlveqsrqpv sekmpvadql
      601 fkemshclfd lkalcsiltq raqgkepnls lllgirslsc sseesenyhs tetlskklsd
      661 vcqlrkeide lrtimsdrya qdmgdncitq
//
LOCUS       XP_041326056              52 aa            linear   VRT 06-MAY-2021
DEFINITION  cardiac phospholamban [Pyrgilauda ruficollis].
ACCESSION   XP_041326056
VERSION     XP_041326056.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470122.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..52
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..52
                     /product="cardiac phospholamban"
                     /calculated_mol_wt=5952
     Region          1..52
                     /region_name="Phospholamban"
                     /note="Phospholamban bioactive peptide and similar
                     proteins; cd20250"
                     /db_xref="CDD:380750"
     Site            order(23..27,29..30,32..34,36..41,43..48,50..52)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:380750"
     CDS             1..52
                     /gene="PLN"
                     /coded_by="XM_041470122.1:392..550"
                     /db_xref="GeneID:121354993"
ORIGIN      
        1 mekvqhmtrs alrrastiev npqarqrlqe lfvnfclili cllliciivm ll
//
LOCUS       XP_041326057             196 aa            linear   VRT 06-MAY-2021
DEFINITION  p53 apoptosis effector related to PMP-22 [Pyrgilauda ruficollis].
ACCESSION   XP_041326057
VERSION     XP_041326057.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470123.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..196
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..196
                     /product="p53 apoptosis effector related to PMP-22"
                     /calculated_mol_wt=21745
     Region          22..155
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..196
                     /gene="LOC121354994"
                     /coded_by="XM_041470123.1:69..659"
                     /db_xref="GeneID:121354994"
ORIGIN      
        1 mvvcglacwr crwllplllg laiimgiial agrgwleses epyvqqaslw esctrgeedl
       61 nwsceslmdy gwgraaaaty lvgfvilvic falaviafsi eilrfnfvrg iggllfvvaa
      121 fqiiglviyp vkftediplt gdnmfswayg fgwastvvvi gcafffcclp nwedevlgni
      181 kptyyysspe rapyln
//
LOCUS       XP_041326058             189 aa            linear   VRT 06-MAY-2021
DEFINITION  p53 apoptosis effector related to PMP-22-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326058
VERSION     XP_041326058.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470124.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..189
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..189
                     /product="p53 apoptosis effector related to PMP-22-like"
                     /calculated_mol_wt=21075
     Region          17..166
                     /region_name="PMP22_Claudin"
                     /note="PMP-22/EMP/MP20/Claudin family; cl21598"
                     /db_xref="CDD:473919"
     CDS             1..189
                     /gene="LOC121354996"
                     /coded_by="XM_041470124.1:18..587"
                     /db_xref="GeneID:121354996"
ORIGIN      
        1 mvkygldytr crwilplllg igvifgiial agwgwlesqt lpyvlqaslw qicrrpnqgg
       61 ewscdslmdy awgraaaaty lvgflllvic falaiiafai dtlrfnfirg iggllfvaav
      121 fsimglviyp vkfsseiemt gvnmfswayg fgwttaimei clgfffcclp nyedqilgnv
      181 kptyfyssp
//
LOCUS       XP_041326059             655 aa            linear   VRT 06-MAY-2021
DEFINITION  rho GTPase-activating protein 18 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326059
VERSION     XP_041326059.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470125.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..655
                     /product="rho GTPase-activating protein 18 isoform X1"
                     /calculated_mol_wt=73718
     Region          312..525
                     /region_name="RhoGAP_ARHGAP18"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of ArhGAP18-like proteins. The
                     function of ArhGAP18 is unknown. Small GTPases cluster
                     into distinct families, and all act as molecular switches,
                     active in their GTP-bound form but...; cd04391"
                     /db_xref="CDD:239856"
     Site            order(356,395,399,468,471..472,500)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239856"
     Site            356
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239856"
     CDS             1..655
                     /gene="ARHGAP18"
                     /coded_by="XM_041470125.1:282..2249"
                     /db_xref="GeneID:121354997"
ORIGIN      
        1 mswrsgsrgv vltayhpsgg agdapdgrrs gqytmnhdhs kkipdgasfd rsgsqdslde
       61 lsmddywkel enihetrgnn heervalvvk epdegeleee wlkeaglsnl fgessgdsle
      121 svvflstltr tqkaavekrv etvtqtmrkr nkqhqipdvr difrlqndsk gkvcdgseps
      181 tvrtsenkne thdgtkgpkf slgtdeqksl ledmpssdtd inleisfaeq aanlkdssvg
      241 kmykggggdt llpnfrlpkd ktgttkigdl apqdmkkvys lalieltaly dilgtefkqq
      301 kavkiktkds glfgvplsll leqdqkkvpg tkiplifqkl iaqieettle tegllripgv
      361 atrvkglcqe leakfyegtf nwenvkqhda asllklfire lpqplltvqy lkafqdvqnl
      421 ptrkqqlqal nllvillpea nrdtlkvlle flqrvidhrd knkmtlknva mvmapnlftf
      481 hgfgsktieq sefvmaagta nvmrfmiqyq tllwtipkfi vnqvrkqtes qkkekkdkam
      541 kkllkkmayd rekhekqekt pndtdvpqgv irvqaphlsk vsmaiqltee lkagdivarf
      601 lsqksgnvqt lkkeevflye iggnigercl dddtymkdly qlnpnaewvv kpkqs
//
LOCUS       XP_041326060             569 aa            linear   VRT 06-MAY-2021
DEFINITION  rho GTPase-activating protein 18 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326060
VERSION     XP_041326060.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470126.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="rho GTPase-activating protein 18 isoform X2"
                     /calculated_mol_wt=64329
     Region          226..439
                     /region_name="RhoGAP_ARHGAP18"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of ArhGAP18-like proteins. The
                     function of ArhGAP18 is unknown. Small GTPases cluster
                     into distinct families, and all act as molecular switches,
                     active in their GTP-bound form but...; cd04391"
                     /db_xref="CDD:239856"
     Site            order(270,309,313,382,385..386,414)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239856"
     Site            270
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239856"
     CDS             1..569
                     /gene="ARHGAP18"
                     /coded_by="XM_041470126.1:23..1732"
                     /db_xref="GeneID:121354997"
ORIGIN      
        1 minrfkfkge leeewlkeag lsnlfgessg dslesvvfls tltrtqkaav ekrvetvtqt
       61 mrkrnkqhqi pdvrdifrlq ndskgkvcdg sepstvrtse nknethdgtk gpkfslgtde
      121 qkslledmps sdtdinleis faeqaanlkd ssvgkmykgg ggdtllpnfr lpkdktgttk
      181 igdlapqdmk kvyslaliel talydilgte fkqqkavkik tkdsglfgvp lsllleqdqk
      241 kvpgtkipli fqkliaqiee ttletegllr ipgvatrvkg lcqeleakfy egtfnwenvk
      301 qhdaasllkl firelpqpll tvqylkafqd vqnlptrkqq lqalnllvil lpeanrdtlk
      361 vlleflqrvi dhrdknkmtl knvamvmapn lftfhgfgsk tieqsefvma agtanvmrfm
      421 iqyqtllwti pkfivnqvrk qtesqkkekk dkamkkllkk maydrekhek qektpndtdv
      481 pqgvirvqap hlskvsmaiq lteelkagdi varflsqksg nvqtlkkeev flyeiggnig
      541 ercldddtym kdlyqlnpna ewvvkpkqs
//
LOCUS       XP_041326062             495 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 200A [Pyrgilauda ruficollis].
ACCESSION   XP_041326062
VERSION     XP_041326062.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470128.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="transmembrane protein 200A"
                     /calculated_mol_wt=54695
     Region          16..161
                     /region_name="DUF2371"
                     /note="Uncharacterized conserved protein (DUF2371);
                     pfam10177"
                     /db_xref="CDD:462979"
     CDS             1..495
                     /gene="TMEM200A"
                     /coded_by="XM_041470128.1:148..1635"
                     /db_xref="GeneID:121354998"
ORIGIN      
        1 miatggvitg laalkrqdsa rsqqhvnlag vpapeenkpv rrrprtdvvi vrgkirlysp
       61 sgfflvlgvl iaffgiamai lgywpqkeql lgsednpsvn etrtprgqgs illrffeqhv
      121 hsdkmkmlgp ftmgigifif icanailhen rdketkiihm rdiystvidi htlrireqkq
      181 lsgaftgllg eaelrhsgss casrlaantv apfsgfksnl rmdssaeede itlnedrtts
      241 sllppllaeq slvqsgsvfg lyphsckasd drntnsikce tksivsssis aftlpvikln
      301 ncvidepsid nitedseitr sqcrnlsmds laipltdtne syrpvasmlp rhnsfvdtps
      361 dpfkssmtlg pstgkllspg aarkqfgsnt slhllsshsk sldldrgpst ltvqaeqrkh
      421 pswprldrsn skgymklenk edpmdrllvp qaavkkdftn kekllmisrs hnnlsfehde
      481 flsnnlkrgt setrf
//
LOCUS       XP_041326063             809 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor alpha-induced protein 3 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326063
VERSION     XP_041326063.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470129.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..809
                     /product="tumor necrosis factor alpha-induced protein 3
                     isoform X1"
                     /calculated_mol_wt=92288
     Region          47..267
                     /region_name="OTU_TNFAIP3"
                     /note="OTU (ovarian tumor) domain of tumor necrosis factor
                     alpha induced protein 3; cd22766"
                     /db_xref="CDD:438603"
     Site            order(104..105,107..109,155..157,161..162,164..165,173,
                     177,180,196..198,220..221,223..225,229..231,233,258,
                     261..263)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438603"
     Region          391..415
                     /region_name="ZnF_A20"
                     /note="A20-like zinc fingers; smart00259"
                     /db_xref="CDD:128555"
     Region          480..505
                     /region_name="ZnF_A20"
                     /note="A20-like zinc fingers; smart00259"
                     /db_xref="CDD:128555"
     Region          608..630
                     /region_name="ZnF_A20"
                     /note="A20-like zinc fingers; smart00259"
                     /db_xref="CDD:128555"
     Region          778..803
                     /region_name="ZnF_A20"
                     /note="A20-like zinc fingers; smart00259"
                     /db_xref="CDD:128555"
     CDS             1..809
                     /gene="TNFAIP3"
                     /coded_by="XM_041470129.1:233..2662"
                     /db_xref="GeneID:121354999"
ORIGIN      
        1 mssrnmagph nlpqalyqsn mlkamkirer tpedlvkpps giihhfrtmh rytiemfrmc
       61 qfcpqfretl qksltdqatq tslerhrkln wcrevrrlvp lktngdgncl mhaasqymwg
      121 iedidlvlrk tlfsalreid trnfklrwqr eavksqefve tglhydtrnw eeeweyliem
      181 tspeisgarn rlpynaleei hifvlanilr rpvivladkv vrslesgssf aplnvggvyl
      241 pllwpaeecy rypivlgydn mhftplvtlk dsgpeiravp lvtsdqgrfe dlnvhfltda
      301 eerekeqllk dylivieipv qgwdhgtthl inaakldegn lpkeinlved yfqlvqheyk
      361 kwqenvepar retcsrnrqd lslsqlsllq mkcetpncpf ymsvntqpyc hecfeqrsqg
      421 nkgrkqsska apeklkaags gssrgdicep ggwisegpvt eprsapptap slflysetta
      481 mkcrtpdcpf tlnvqhnglc ercynrqlsp cnnlddqrhl dyatckmcrq kakrtfngic
      541 stcfkrsteq spngspaflp tchqrstsdp sqisqilhqh schqapnshg keppppalpp
      601 eenrggnlcr kpgckffgts qnegfctlcf feyrenhdsv llrhqrrsqr kssapdqtgs
      661 saagfrntvs cqrrdcgtlg stmlegycqn cfiiaqnqrf qearrteeql vrqpertgqh
      721 rgdvqraals aqkrqcavas crnnqagrsd dlcpecrrlg qlppsgsare tvaqeppkqr
      781 crapacdhyg nvkcngycne cyqfkqiyg
//
LOCUS       XP_041326064             726 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor alpha-induced protein 3 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326064
VERSION     XP_041326064.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470130.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..726
                     /product="tumor necrosis factor alpha-induced protein 3
                     isoform X2"
                     /calculated_mol_wt=83095
     Region          47..267
                     /region_name="OTU_TNFAIP3"
                     /note="OTU (ovarian tumor) domain of tumor necrosis factor
                     alpha induced protein 3; cd22766"
                     /db_xref="CDD:438603"
     Site            order(104..105,107..109,155..157,161..162,164..165,173,
                     177,180,196..198,220..221,223..225,229..231,233,258,
                     261..263)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:438603"
     Region          391..415
                     /region_name="ZnF_A20"
                     /note="A20-like zinc fingers; smart00259"
                     /db_xref="CDD:128555"
     Region          480..505
                     /region_name="ZnF_A20"
                     /note="A20-like zinc fingers; smart00259"
                     /db_xref="CDD:128555"
     Region          608..630
                     /region_name="ZnF_A20"
                     /note="A20-like zinc fingers; smart00259"
                     /db_xref="CDD:128555"
     CDS             1..726
                     /gene="TNFAIP3"
                     /coded_by="XM_041470130.1:233..2413"
                     /db_xref="GeneID:121354999"
ORIGIN      
        1 mssrnmagph nlpqalyqsn mlkamkirer tpedlvkpps giihhfrtmh rytiemfrmc
       61 qfcpqfretl qksltdqatq tslerhrkln wcrevrrlvp lktngdgncl mhaasqymwg
      121 iedidlvlrk tlfsalreid trnfklrwqr eavksqefve tglhydtrnw eeeweyliem
      181 tspeisgarn rlpynaleei hifvlanilr rpvivladkv vrslesgssf aplnvggvyl
      241 pllwpaeecy rypivlgydn mhftplvtlk dsgpeiravp lvtsdqgrfe dlnvhfltda
      301 eerekeqllk dylivieipv qgwdhgtthl inaakldegn lpkeinlved yfqlvqheyk
      361 kwqenvepar retcsrnrqd lslsqlsllq mkcetpncpf ymsvntqpyc hecfeqrsqg
      421 nkgrkqsska apeklkaags gssrgdicep ggwisegpvt eprsapptap slflysetta
      481 mkcrtpdcpf tlnvqhnglc ercynrqlsp cnnlddqrhl dyatckmcrq kakrtfngic
      541 stcfkrsteq spngspaflp tchqrstsdp sqisqilhqh schqapnshg keppppalpp
      601 eenrggnlcr kpgckffgts qnegfctlcf feyrenhdsv llrhqrrsqr kssapdqtgs
      661 saagfrntvs cqrrdcgtlg stmlegycqn cfiiaqnqrf qearrteeql vrqpegstee
      721 mcseqh
//
LOCUS       XP_041326065            1246 aa            linear   VRT 06-MAY-2021
DEFINITION  jouberin [Pyrgilauda ruficollis].
ACCESSION   XP_041326065
VERSION     XP_041326065.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470131.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1246
                     /product="jouberin"
                     /calculated_mol_wt=140327
     Region          <571..885
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          596..636
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          642..679
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          684..725
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          732..779
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          786..821
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          829..872
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1053..1104
                     /region_name="SH3_AHI-1"
                     /note="Src Homology 3 domain of Abelson helper integration
                     site-1 (AHI-1); cd11812"
                     /db_xref="CDD:212746"
     Site            order(1058,1060,1063,1067,1085..1086,1100,1102..1103)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212746"
     CDS             1..1246
                     /gene="AHI1"
                     /coded_by="XM_041470131.1:387..4127"
                     /db_xref="GeneID:121355000"
ORIGIN      
        1 mraveseaka ktkvrfeeif rrhagladtk kprkkkfdsq esivldtfrn nidlskesvn
       61 deaiinntyn peeesprftk nklrekasia kkinndvvsg eenkqpksnr kkkksllqeq
      121 fneeedlyea klgsfeektn dfpkkktksk sqtdvpdqeg drmiknslte vrnvteleee
      181 eqliqayqlh vaeeeanaik tkmrkklkeq mseststvqr hevalnnevg kkkkkkkera
      241 vlseaetsam slselqhhlp eaggnesqsp erlftsegqk legsmerqkp kakkvkkksr
      301 keettevaae ndeemknsei stqskfgfgd dlvlgvyihr sdqlkidhlv shpvvkihiv
      361 dqrsglyvkk dyskkedssy eqgeiehilp imtqpcdflk sksaipewee qvifnecfty
      421 fiqntddnpq vilffevlds pgmhevrass dvriqegryr kicwaflklv gangvlnvgg
      481 klrlqlyyps srtkshsnvv evydwwakcp rnrypstlyv tvkglklpdh vgpsfhsmaa
      541 vqqeqsntvl selqrerrep sleekkepfk wsrlpgqacr ipnkhlfslr ggdmgcfcir
      601 fshdgrtlaa acagrsgypi alyeipsgqf lrefyghlni vydlcwskdn qylltassdg
      661 tvrmwkiemk aasavrvfph psfvytakyh pvadslvvtg cydsviriwn anvkeihgql
      721 lqeldghksf intlcfdaeg hhmfsgdssg liivwdtpvk gnsphlfqhw kvnkeikend
      781 ikgtpvnhle vhpngrrlli hakdstlrim dlrilaakky vgatnyreki hstltpcgtf
      841 lfsgsedgka yvwnpetgdq vaiysdlsft splrdvafhp hehmvsfcaf gqnhpilvyi
      901 ydykvaqqea elvrdlsssl ttaaprgphf issfseipvq ktsvmspadq fvsaarasmr
      961 mqkvkqklds vmansnlllp apsslsphsr lrlpgalgip lnplysftae sgcfspvgnp
     1021 lsrtllgrlq knddsltalg vgggnscppg qetvvalydy tahrsdelti hrsdiiqvly
     1081 kdndnwwfgs langqqgyfp anyvagekey eeqpsglipd stpllpegst eaeegfltld
     1141 kmspatsksg dlkfiskhdt drdspategt kkkkkriqrn egenqhnlms vdtplssvtt
     1201 ngvenepash gvelkkkkkk aargsnlsts grtniafele rhdaea
//
LOCUS       XP_041326066             288 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326066
VERSION     XP_041326066.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470132.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="syntaxin-11"
                     /calculated_mol_wt=33724
     Region          44..238
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          207..272
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(235,242,245)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            238
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..288
                     /gene="STX11"
                     /coded_by="XM_041470132.1:1385..2251"
                     /db_xref="GeneID:121355001"
ORIGIN      
        1 mkdrlselre farlhnqefs dsdddenspq dillyetdya leilhkdiqs irtendhlka
       61 dvnrlrkqns rfltsmrrls sikrdtncia rdiksrgesi hrklqvmrdf cedaitkyga
      121 msviarvakn hyvdlmhtfq damfdynate mnqrenckir iqrqleimgk dvsghqieem
      181 ieqgkwdvfs enllsdvkga raalneietr hkelvklegr ikevhelflq vallveeqad
      241 tfdvieinmq nvedyvgdak dqvkkaleyr rkhplrtilc ccisccrr
//
LOCUS       XP_041326067             288 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326067
VERSION     XP_041326067.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470133.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="syntaxin-11"
                     /calculated_mol_wt=33724
     Region          44..238
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          207..272
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(235,242,245)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            238
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..288
                     /gene="STX11"
                     /coded_by="XM_041470133.1:336..1202"
                     /db_xref="GeneID:121355001"
ORIGIN      
        1 mkdrlselre farlhnqefs dsdddenspq dillyetdya leilhkdiqs irtendhlka
       61 dvnrlrkqns rfltsmrrls sikrdtncia rdiksrgesi hrklqvmrdf cedaitkyga
      121 msviarvakn hyvdlmhtfq damfdynate mnqrenckir iqrqleimgk dvsghqieem
      181 ieqgkwdvfs enllsdvkga raalneietr hkelvklegr ikevhelflq vallveeqad
      241 tfdvieinmq nvedyvgdak dqvkkaleyr rkhplrtilc ccisccrr
//
LOCUS       XP_041326068             288 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326068
VERSION     XP_041326068.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470134.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="syntaxin-11"
                     /calculated_mol_wt=33724
     Region          44..238
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          207..272
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(235,242,245)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            238
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..288
                     /gene="STX11"
                     /coded_by="XM_041470134.1:232..1098"
                     /db_xref="GeneID:121355001"
ORIGIN      
        1 mkdrlselre farlhnqefs dsdddenspq dillyetdya leilhkdiqs irtendhlka
       61 dvnrlrkqns rfltsmrrls sikrdtncia rdiksrgesi hrklqvmrdf cedaitkyga
      121 msviarvakn hyvdlmhtfq damfdynate mnqrenckir iqrqleimgk dvsghqieem
      181 ieqgkwdvfs enllsdvkga raalneietr hkelvklegr ikevhelflq vallveeqad
      241 tfdvieinmq nvedyvgdak dqvkkaleyr rkhplrtilc ccisccrr
//
LOCUS       XP_041326069             288 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326069
VERSION     XP_041326069.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470135.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="syntaxin-11"
                     /calculated_mol_wt=33724
     Region          44..238
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          207..272
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(235,242,245)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            238
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..288
                     /gene="STX11"
                     /coded_by="XM_041470135.1:84..950"
                     /db_xref="GeneID:121355001"
ORIGIN      
        1 mkdrlselre farlhnqefs dsdddenspq dillyetdya leilhkdiqs irtendhlka
       61 dvnrlrkqns rfltsmrrls sikrdtncia rdiksrgesi hrklqvmrdf cedaitkyga
      121 msviarvakn hyvdlmhtfq damfdynate mnqrenckir iqrqleimgk dvsghqieem
      181 ieqgkwdvfs enllsdvkga raalneietr hkelvklegr ikevhelflq vallveeqad
      241 tfdvieinmq nvedyvgdak dqvkkaleyr rkhplrtilc ccisccrr
//
LOCUS       XP_041326070             288 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326070
VERSION     XP_041326070.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470136.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..288
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..288
                     /product="syntaxin-11"
                     /calculated_mol_wt=33724
     Region          44..238
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          207..272
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(235,242,245)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            238
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..288
                     /gene="STX11"
                     /coded_by="XM_041470136.1:82..948"
                     /db_xref="GeneID:121355001"
ORIGIN      
        1 mkdrlselre farlhnqefs dsdddenspq dillyetdya leilhkdiqs irtendhlka
       61 dvnrlrkqns rfltsmrrls sikrdtncia rdiksrgesi hrklqvmrdf cedaitkyga
      121 msviarvakn hyvdlmhtfq damfdynate mnqrenckir iqrqleimgk dvsghqieem
      181 ieqgkwdvfs enllsdvkga raalneietr hkelvklegr ikevhelflq vallveeqad
      241 tfdvieinmq nvedyvgdak dqvkkaleyr rkhplrtilc ccisccrr
//
LOCUS       XP_041326071             740 aa            linear   VRT 06-MAY-2021
DEFINITION  ensconsin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326071
VERSION     XP_041326071.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470137.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..740
                     /product="ensconsin isoform X1"
                     /calculated_mol_wt=83329
     Region          67..>142
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     Region          <313..448
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          432..587
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     CDS             1..740
                     /gene="MAP7"
                     /coded_by="XM_041470137.1:64..2286"
                     /db_xref="GeneID:121355003"
ORIGIN      
        1 maeaagrsgg rrrpaategs etqdkkvasg qsnagtkpdh ptvlkvddrq rlarerreer
       61 ekqlaaresi wlereerarq hyekhleerr kkleeqrlke errraaveek rrqkleeeke
      121 rheavvrrti ersqkpkqrq nrwswggalh nrinntdrdr rsvstmnlsk hvdpvinkrl
      181 ssssatllns pdrarrlqls pwessivsrl ltpthsflar skstaalsgd avipvcprsa
      241 scsplsplsy kalncrnsge raklyastda vgrrrtthla gtdkrekdhl sssfsanfkg
      301 ghftsslkar ssapspvwha skslpflpgt pkqitsppgs skvssaqtrp pspgnirpvk
      361 keikpegekk rpekeaekan evrteeskga sagagestsq eqlsvqgelt qaaspslpaa
      421 pstlspapal pkpsagttdp eeatrlltek rrlareqrer eeqerreree lerqkkeels
      481 qriaeerarr eeeearrqea ekqrkdaeer ekeerlrrqa eereqkekee meriqkqkee
      541 earlreeaer irlerekhfq reeqerlerk krleeimkrt rrveavdkks ndqqnghisk
      601 anitgeavag spaspsepaa gpqhavppph ygtpavppph ngtsaacvra gaphqppanv
      661 dsnlnpeena nengmsmqnd nfeeimnlpi gskpsrldam nndgsnspei plnpilafee
      721 kgtllpqvds vqthqtaevi
//
LOCUS       XP_041326072             739 aa            linear   VRT 06-MAY-2021
DEFINITION  ensconsin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326072
VERSION     XP_041326072.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470138.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..739
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..739
                     /product="ensconsin isoform X2"
                     /calculated_mol_wt=83258
     Region          67..>142
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     Region          343..>439
                     /region_name="PRK13335"
                     /note="superantigen-like protein SSL3; Reviewed"
                     /db_xref="CDD:139494"
     Region          431..586
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     CDS             1..739
                     /gene="MAP7"
                     /coded_by="XM_041470138.1:64..2283"
                     /db_xref="GeneID:121355003"
ORIGIN      
        1 maeaagrsgg rrrpaategs etqdkkvasg qsnagtkpdh ptvlkvddrq rlarerreer
       61 ekqlaaresi wlereerarq hyekhleerr kkleeqrlke errraaveek rrqkleeeke
      121 rheavvrrti ersqkpkqrq nrwswggalh nrinntdrdr rsvstmnlsk hvdpvinkrl
      181 ssssatllns pdrarrlqls pwessivsrl ltpthsflar skstaalsgd avipvcprsa
      241 scsplsplsy kalncrnsge raklyastda vgrrrtthla gtdkrekdhl sssfsanfkg
      301 ghftsslkar ssapspvwha skslpflpgt pkqitsppgs skvssaqtrp pspgnirpvk
      361 keikpegekk rpekeaekan evrteeskga sagagestsq eqlsvqgelt qaspslpaap
      421 stlspapalp kpsagttdpe eatrlltekr rlareqrere eqerrereel erqkkeelsq
      481 riaeerarre eeearrqeae kqrkdaeere keerlrrqae ereqkekeem eriqkqkeee
      541 arlreeaeri rlerekhfqr eeqerlerkk rleeimkrtr rveavdkksn dqqnghiska
      601 nitgeavags paspsepaag pqhavppphy gtpavppphn gtsaacvrag aphqppanvd
      661 snlnpeenan engmsmqndn feeimnlpig skpsrldamn ndgsnspeip lnpilafeek
      721 gtllpqvdsv qthqtaevi
//
LOCUS       XP_041326073             732 aa            linear   VRT 06-MAY-2021
DEFINITION  ensconsin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326073
VERSION     XP_041326073.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470139.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="ensconsin isoform X3"
                     /calculated_mol_wt=82477
     Region          67..>142
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     Region          <305..440
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          424..579
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     CDS             1..732
                     /gene="MAP7"
                     /coded_by="XM_041470139.1:64..2262"
                     /db_xref="GeneID:121355003"
ORIGIN      
        1 maeaagrsgg rrrpaategs etqdkkvasg qsnagtkpdh ptvlkvddrq rlarerreer
       61 ekqlaaresi wlereerarq hyekhleerr kkleeqrlke errraaveek rrqkleeeke
      121 rheavvrrti ersqkpkqrq nrwswggalh nrinntdrdr rsvstmnlsk hvdpvinkrl
      181 ssssatllns pdrarrlqls pwessivsrl ltpthsflar skstaalsgd aascsplspl
      241 sykalncrns geraklyast davgrrrtth lagtdkrekd hlsssfsanf kgghftsslk
      301 arssapspvw haskslpflp gtpkqitspp gsskvssaqt rppspgnirp vkkeikpege
      361 kkrpekeaek anevrteesk gasagagest sqeqlsvqge ltqaaspslp aapstlspap
      421 alpkpsagtt dpeeatrllt ekrrlareqr ereeqerrer eelerqkkee lsqriaeera
      481 rreeeearrq eaekqrkdae erekeerlrr qaeereqkek eemeriqkqk eeearlreea
      541 erirlerekh fqreeqerle rkkrleeimk rtrrveavdk ksndqqnghi skanitgeav
      601 agspaspsep aagpqhavpp phygtpavpp phngtsaacv ragaphqppa nvdsnlnpee
      661 nanengmsmq ndnfeeimnl pigskpsrld amnndgsnsp eiplnpilaf eekgtllpqv
      721 dsvqthqtae vi
//
LOCUS       XP_041326074             602 aa            linear   VRT 06-MAY-2021
DEFINITION  ensconsin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326074
VERSION     XP_041326074.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470140.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..602
                     /product="ensconsin isoform X4"
                     /calculated_mol_wt=69110
     Region          67..>142
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     Region          <313..448
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          432..571
                     /region_name="MAP7"
                     /note="MAP7 (E-MAP-115) family; pfam05672"
                     /db_xref="CDD:461709"
     CDS             1..602
                     /gene="MAP7"
                     /coded_by="XM_041470140.1:64..1872"
                     /db_xref="GeneID:121355003"
ORIGIN      
        1 maeaagrsgg rrrpaategs etqdkkvasg qsnagtkpdh ptvlkvddrq rlarerreer
       61 ekqlaaresi wlereerarq hyekhleerr kkleeqrlke errraaveek rrqkleeeke
      121 rheavvrrti ersqkpkqrq nrwswggalh nrinntdrdr rsvstmnlsk hvdpvinkrl
      181 ssssatllns pdrarrlqls pwessivsrl ltpthsflar skstaalsgd avipvcprsa
      241 scsplsplsy kalncrnsge raklyastda vgrrrtthla gtdkrekdhl sssfsanfkg
      301 ghftsslkar ssapspvwha skslpflpgt pkqitsppgs skvssaqtrp pspgnirpvk
      361 keikpegekk rpekeaekan evrteeskga sagagestsq eqlsvqgelt qaaspslpaa
      421 pstlspapal pkpsagttdp eeatrlltek rrlareqrer eeqerreree lerqkkeels
      481 qriaeerarr eeeearrqea ekqrkdaeer ekeerlrrqa eereqkekee meriqkqkee
      541 earlreeaer irlerekhfq reeqerlerk kiqlindkql wfgrkifklm paniilplyi
      601 pl
//
LOCUS       XP_041326076             834 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 170-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326076
VERSION     XP_041326076.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470142.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..834
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X1"
                     /calculated_mol_wt=96050
     Region          1..>139
                     /region_name="ARMT1-like_dom"
                     /note="Damage-control phosphatase ARMT1-like domain;
                     cl15397"
                     /db_xref="CDD:472798"
     Region          <153..>723
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..834
                     /gene="LOC121355004"
                     /coded_by="XM_041470142.1:367..2871"
                     /db_xref="GeneID:121355004"
ORIGIN      
        1 myrrihaala qnppidnfdv fkegkaqnff esqeavialc tyfqellkni kdldekqlqe
       61 elfkllqvsl wgnkcdlsfs agedssqkss plqslenmvp yilvndmekv wsllnakknr
      121 tersnvrvdi ildnagfele shdhvlldip vtreqmnhyr aaaetaqsel aalsvkydca
      181 qsellklrss miskeasfqe lkaeaesyke nearlmsrll slqtriqeme eelcvlaask
      241 nqaelaeqva ykenlelkee lheksaelnk ylneyeenmt qsskisknye ellahlsgfl
      301 didireekpq ehltskvsdi ckenvtlkdq vaalqeavnv hemeskanre timrlvseva
      361 keqkkaagyy qdmeklskdl dsaiikrqsl ememrnlqek ltvnqraldt skqelhnlkk
      421 ssheldaslk ssreevrtaq rsleafkeei atllscgsai vkpsekaile riqeinckee
      481 nkeimvsqle tqlakltkal enqtrlyhea lersrkaekc senfhnqlkh leeelltgdl
      541 mqdglklekq kylkfleqln ekmkldslaa evgfdmamdv ilarveqlvk legdavvenk
      601 tvayslrrkl kaqkeklesk elhmnllrqk ithleeekqv raalaverde anlavkklhk
      661 mierlqkqld laretntdlk aklsetselk iktleqnrti eelsksqekl ermkekaekq
      721 lrsakselll kerkatedke knknmleavt semkvlkttl aelakrerql adfrevvsrm
      781 lgldiaslal pdyeiisrle glihshqhlf fpcvclkdva rapeeqqrni qllh
//
LOCUS       XP_041326077             707 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 170-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326077
VERSION     XP_041326077.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470143.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="coiled-coil domain-containing protein 170-like
                     isoform X2"
                     /calculated_mol_wt=81456
     Region          <26..>596
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..707
                     /gene="LOC121355004"
                     /coded_by="XM_041470143.1:11..2134"
                     /db_xref="GeneID:121355004"
ORIGIN      
        1 mkstkvreps fleshdhvll dipvtreqmn hyraaaetaq selaalsvky dcaqsellkl
       61 rssmiskeas fqelkaeaes ykenearlms rllslqtriq emeeelcvla asknqaelae
      121 qvaykenlel keelheksae lnkylneyee nmtqsskisk nyeellahls gfldidiree
      181 kpqehltskv sdickenvtl kdqvaalqea vnvhemeska nretimrlvs evakeqkkaa
      241 gyyqdmekls kdldsaiikr qslememrnl qekltvnqra ldtskqelhn lkksshelda
      301 slkssreevr taqrsleafk eeiatllscg saivkpseka ileriqeinc keenkeimvs
      361 qletqlaklt kalenqtrly healersrka ekcsenfhnq lkhleeellt gdlmqdglkl
      421 ekqkylkfle qlnekmklds laaevgfdma mdvilarveq lvklegdavv enktvayslr
      481 rklkaqkekl eskelhmnll rqkithleee kqvraalave rdeanlavkk lhkmierlqk
      541 qldlaretnt dlkaklsets elkiktleqn rtieelsksq eklermkeka ekqlrsakse
      601 lllkerkate dkeknknmle avtsemkvlk ttlaelakre rqladfrevv srmlgldias
      661 lalpdyeiis rleglihshq hlffpcvclk dvarapeeqq rniqllh
//
LOCUS       XP_041326078             321 aa            linear   VRT 06-MAY-2021
DEFINITION  damage-control phosphatase ARMT1-like isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326078
VERSION     XP_041326078.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470144.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..321
                     /product="damage-control phosphatase ARMT1-like isoform
                     X3"
                     /calculated_mol_wt=36767
     Region          1..299
                     /region_name="ARMT1-like_dom"
                     /note="Damage-control phosphatase ARMT1-like domain;
                     pfam01937"
                     /db_xref="CDD:396496"
     CDS             1..321
                     /gene="LOC121355004"
                     /coded_by="XM_041470144.1:310..1275"
                     /db_xref="GeneID:121355004"
ORIGIN      
        1 myrrihaala qnppidnfdv fkegkaqnff esqeavialc tyfqellkni kdldekqlqe
       61 elfkllqvsl wgnkcdlsfs agedssqkss plqslenmvp yilvndmekv wsllnakknr
      121 tersnvrvdi ildnagfelv sdlvladfll sskladevyf hgksipwyvs dttkhdfnwt
      181 ikqlgsanhm wmsrcginwe gnlkkgvwvf rdhmfwtlph dfssmsevap dlyaelqksn
      241 lllfkgdlny rkltgdrkwe ynvpfhqaln kfhpaplcsl rtlksdtqvg lkpgqgeqiq
      301 asepewmvsg kygvvqfdag l
//
LOCUS       XP_041326079             469 aa            linear   VRT 06-MAY-2021
DEFINITION  required for meiotic nuclear division protein 1 homolog isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326079
VERSION     XP_041326079.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470145.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..469
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..469
                     /product="required for meiotic nuclear division protein 1
                     homolog isoform X1"
                     /calculated_mol_wt=54393
     Region          225..402
                     /region_name="DUF155"
                     /note="RMND1/Sif2-Sif3/Mrx10, DUF155; pfam02582"
                     /db_xref="CDD:460604"
     CDS             1..469
                     /gene="RMND1"
                     /coded_by="XM_041470145.1:223..1632"
                     /db_xref="GeneID:121355005"
ORIGIN      
        1 mrlkllhrqm rsfhalttic qcqsfnktgy lllkldneve raahrtaksw dlyalkpvfp
       61 wltsqcvqvr nrhflqgfls tlernvyyqn gegffsswrr lgvtmmenyr lntewikklr
      121 ntssrfyavv sagktvpkas nqpvkrppka prtkqpsrtn lplsdmenlm qctafatade
      181 yhlgnlchdl tshgyveits lprdaanvlv vsteksaked dpgmifffre gavvfwnvee
      241 ksmknimrvl ehheiqpyev alvhweneel nyrigegqsk lhkgqillns eldsdevvlq
      301 kfafsnalcl svklaiwesl ldnfvesiqs ipeilksrrk vklshadvmq kigelfalrh
      361 rinlssdlli tpdfywdrek leelydktcq flninrrvkv mneklqhcme ltdlmrnhln
      421 ekhalrlewm ivilitievg gaffniknvi tisaisilht lrikitvlv
//
LOCUS       XP_041326080             448 aa            linear   VRT 06-MAY-2021
DEFINITION  required for meiotic nuclear division protein 1 homolog isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326080
VERSION     XP_041326080.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470146.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..448
                     /product="required for meiotic nuclear division protein 1
                     homolog isoform X2"
                     /calculated_mol_wt=52234
     Region          225..402
                     /region_name="DUF155"
                     /note="RMND1/Sif2-Sif3/Mrx10, DUF155; pfam02582"
                     /db_xref="CDD:460604"
     CDS             1..448
                     /gene="RMND1"
                     /coded_by="XM_041470146.1:37..1383"
                     /db_xref="GeneID:121355005"
ORIGIN      
        1 mrlkllhrqm rsfhalttic qcqsfnktgy lllkldneve raahrtaksw dlyalkpvfp
       61 wltsqcvqvr nrhflqgfls tlernvyyqn gegffsswrr lgvtmmenyr lntewikklr
      121 ntssrfyavv sagktvpkas nqpvkrppka prtkqpsrtn lplsdmenlm qctafatade
      181 yhlgnlchdl tshgyveits lprdaanvlv vsteksaked dpgmifffre gavvfwnvee
      241 ksmknimrvl ehheiqpyev alvhweneel nyrigegqsk lhkgqillns eldsdevvlq
      301 kfafsnalcl svklaiwesl ldnfvesiqs ipeilksrrk vklshadvmq kigelfalrh
      361 rinlssdlli tpdfywdrek leelydktcq flninrrvkv mneklqhcme ltdlmrnhln
      421 ekhalrlewm ivilitievl felarvvf
//
LOCUS       XP_041326081             422 aa            linear   VRT 06-MAY-2021
DEFINITION  required for meiotic nuclear division protein 1 homolog isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326081
VERSION     XP_041326081.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470147.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..422
                     /product="required for meiotic nuclear division protein 1
                     homolog isoform X3"
                     /calculated_mol_wt=48715
     Region          198..355
                     /region_name="DUF155"
                     /note="RMND1/Sif2-Sif3/Mrx10, DUF155; pfam02582"
                     /db_xref="CDD:460604"
     CDS             1..422
                     /gene="RMND1"
                     /coded_by="XM_041470147.1:240..1508"
                     /db_xref="GeneID:121355005"
ORIGIN      
        1 mrlkllhrqm rsfhalttic qcqsfnktgy lllkldneve raahrtaksw dlyalkpvfp
       61 wltsqcvqvr nrhflqgfls tlernvyyqn gegffsswrr lgvtmmenyr lntewikklr
      121 ntssrfyavv sagktvpkas nqpvkrppka prtkqpsrtn lplsdmenlm qctafatade
      181 yhlgnlchdl tshgyveits lprdaanvlv vsteksaked dpgmifffrg qsklhkgqil
      241 lnseldsdev vlqkfafsna lclsvklaiw eslldnfves iqsipeilks rrkvklshad
      301 vmqkigelfa lrhrinlssd llitpdfywd rekleelydk tcqflninrr vkvmneklqh
      361 cmeltdlmrn hlnekhalrl ewmiviliti evggaffnik nvitisaisi lhtlrikitv
      421 lv
//
LOCUS       XP_041326082             370 aa            linear   VRT 06-MAY-2021
DEFINITION  required for meiotic nuclear division protein 1 homolog isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326082
VERSION     XP_041326082.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470148.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..370
                     /product="required for meiotic nuclear division protein 1
                     homolog isoform X4"
                     /calculated_mol_wt=42533
     Region          225..>363
                     /region_name="DUF155"
                     /note="RMND1/Sif2-Sif3/Mrx10, DUF155; pfam02582"
                     /db_xref="CDD:460604"
     CDS             1..370
                     /gene="RMND1"
                     /coded_by="XM_041470148.1:240..1352"
                     /db_xref="GeneID:121355005"
ORIGIN      
        1 mrlkllhrqm rsfhalttic qcqsfnktgy lllkldneve raahrtaksw dlyalkpvfp
       61 wltsqcvqvr nrhflqgfls tlernvyyqn gegffsswrr lgvtmmenyr lntewikklr
      121 ntssrfyavv sagktvpkas nqpvkrppka prtkqpsrtn lplsdmenlm qctafatade
      181 yhlgnlchdl tshgyveits lprdaanvlv vsteksaked dpgmifffre gavvfwnvee
      241 ksmknimrvl ehheiqpyev alvhweneel nyrigegqsk lhkgqillns eldsdevvlq
      301 kfafsnalcl svklaiwesl ldnfvesiqs ipeilksrrk vklshadvmq kigelfalrg
      361 slnyssthsf
//
LOCUS       XP_041326083             337 aa            linear   VRT 06-MAY-2021
DEFINITION  hairy/enhancer-of-split related with YRPW motif protein 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326083
VERSION     XP_041326083.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470149.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..337
                     /product="hairy/enhancer-of-split related with YRPW motif
                     protein 2"
                     /calculated_mol_wt=35474
     Region          40..121
                     /region_name="bHLH-O_HEY2"
                     /note="basic helix-loop-helix-orange (bHLH-O) domain found
                     in hairy/enhancer-of-split related with YRPW motif protein
                     2 (HEY2) and similar proteins; cd18920"
                     /db_xref="CDD:381490"
     Site            order(53..55,58,60..61,65,88..89)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:381490"
     Site            order(60..61,63..65,67..68,70..71,74..75,78,86,88..90,
                     93..94,96..97,99..101,103..104,107)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:381490"
     Region          119..165
                     /region_name="ORANGE"
                     /note="Orange domain; smart00511"
                     /db_xref="CDD:128787"
     CDS             1..337
                     /gene="HEY2"
                     /coded_by="XM_041470149.1:126..1139"
                     /db_xref="GeneID:121355006"
ORIGIN      
        1 mkrpceetts dsdmdetidv gsennysgqs nssvirsnsp tttsqimark krrgiiekrr
       61 rdrinnslse lrrlvptafe kqgsakleka eilqmtvdhl kmlqatggkg yfdahslamd
      121 fmsigfrecl tevaryltsv egldtsdplr vrlvshlstc asqreaaamt ssmvhhhhhh
      181 plhphhwaaa fhhlpaallq pnglhgsdaa pcrlssdvpp hgsalltatf ahadaalrvp
      241 sagsiapcvp plstsllsls atvhaaaaaa taaaqsfpls ftgtfpmlpp saaaaavaaa
      301 taitpplavs ataspqqagt gggtkpyrpw gtevgaf
//
LOCUS       XP_041326084             574 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein 8-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326084
VERSION     XP_041326084.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470150.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..574
                     /product="vacuolar protein 8-like"
                     /calculated_mol_wt=63979
     Region          86..117
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          <169..342
                     /region_name="SRP1"
                     /note="Karyopherin (importin) alpha [Intracellular
                     trafficking and secretion]; COG5064"
                     /db_xref="CDD:227396"
     Region          249..274
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Site            order(265,269,273,309,313,317,350,354,358)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293788"
     Region          282..320
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     Region          325..359
                     /region_name="armadillo repeat"
                     /note="armadillo repeat [structural motif]"
                     /db_xref="CDD:293788"
     CDS             1..574
                     /gene="LOC121355008"
                     /coded_by="XM_041470150.1:7..1731"
                     /db_xref="GeneID:121355008"
ORIGIN      
        1 mgqlcgrcmq llrdfigfvq rmssdlvqgi kecltliskc sclkqnsskn rqlykpilqp
       61 hervtaqefl qhiekdfems plgkdpleal rtlsfsenpg lqqsaalyyl hmsqhmnipl
      121 pvehlepfya llrsadlevq qmsslslvnf llegnidkel vvqmallepi ldllesedpt
      181 vqcnscacim tlavsesnre aigaargvtp llslansydp rvqqnavgai lnltqsekiq
      241 qvlckegalp vlalllespd sevqyyscaa lsnvaanvqh hkallrpsdr fllrtlisll
      301 sssvdkvssq acvclrnlat svdiqaemva envlpklcsl lasgsedvrr asiallwils
      361 qhppnqdtla caellqslgt llaahktdpv ivghtaciik nlclsknkqr itesrcvegl
      421 lqtmlltdtq edslryvtcc laelakqeea mlhmvqwmde pltkclvrla gqrehpepsf
      481 haasiilhmi ghekmmllwk hhigeiqayl knflthpevr fqqlgistlc rlqadpdfsl
      541 afrksqmakl leqvrqqtee tqellraamc heds
//
LOCUS       XP_041326085             363 aa            linear   VRT 06-MAY-2021
DEFINITION  protein LEG1 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041326085
VERSION     XP_041326085.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470151.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="protein LEG1 homolog"
                     /calculated_mol_wt=40449
     Region          36..355
                     /region_name="Leg1"
                     /note="pfam05612"
                     /db_xref="CDD:428543"
     CDS             1..363
                     /gene="CUNH6orf58"
                     /coded_by="XM_041470151.1:1..1092"
                     /db_xref="GeneID:121355009"
ORIGIN      
        1 mwpcfglhal lvvavtlspa tvvaqsendv pggvypplwd lapeslldfp vkdnkivisa
       61 wnyqgrlgvy ksllsasaky fdafgpqnsg nilwglplqh gwqfrtgrla dpsgvtscgy
      121 engeilcqsv rswwscmnyy lsiipflgav eaglfgqlpy eieilppeeq kddfcysvkd
      181 crsrmpklmd dwkaffeyll stehkalssa slssfkldda lglmwkahts siayalpkfq
      241 dslkylsdpe ahfgedwana vdfiaathfs tdlvttnefq aflpqrmlve gdvlppisdf
      301 spgqnkvlvs lralhkvnkm tgglllklwq kamsteagrk kgrelieslp wsqkfelldl
      361 igf
//
LOCUS       XP_041326086             738 aa            linear   VRT 06-MAY-2021
DEFINITION  band 4.1-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326086
VERSION     XP_041326086.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470152.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..738
                     /product="band 4.1-like protein 2 isoform X1"
                     /calculated_mol_wt=82824
     Region          208..397
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          392..485
                     /region_name="FERM_C_4_1_family"
                     /note="FERM domain C-lobe of Protein 4.1 family; cd13184"
                     /db_xref="CDD:270005"
     Site            order(401,418,420,426)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270005"
     Site            order(430,435..438,473,477,480..481)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Site            473..484
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Region          495..538
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     Region          625..731
                     /region_name="4_1_CTD"
                     /note="4.1 protein C-terminal domain (CTD); pfam05902"
                     /db_xref="CDD:461774"
     CDS             1..738
                     /gene="EPB41L2"
                     /coded_by="XM_041470152.1:183..2399"
                     /db_xref="GeneID:121355011"
ORIGIN      
        1 mttevgsete vkkdseqlgp hkakdrpeea setpgdqksr etssgeaqds svpaptskss
       61 pssqkkekss peskgisrfl ppwlkkqksy tlaepkdepk kratgeeqvv eesesqaleg
      121 vaqprkslee atenrqnaka ddkekhsvss aeiqpskedg keteveevae kkeesqeekr
      181 etkevqtaei kidnipqksp kkiktvqckv mlldgteyic dlekrargqv lfdkvcehln
      241 llekdyfgll fyenseqknw ldpskeikrq irslpwiftf nvkfyppdps qlteditryf
      301 lclqlrqdiv sgrlpcsfvt hallgsytlq aelgdhdpee hssdyisefq fapnqtqeme
      361 ekvaelhkth rgltpaqads qflenakrls mygvdlhhak dsegvdimlg vcanglliyk
      421 drlrinrfaw pkilkisykr snfyikvrpa eleqfestig fklpnhraak rlwkvcvehh
      481 tffrllspeq ppkakfltlg skfrysgrtq aqtrqasnli drpapyfert sskrvsrsld
      541 gapmgisdqs lvrdfsatgg qaagdkiidl eaagqaklke ggreedespl ktpqleltqd
      601 gkppvvktem vtisdatqrt eistkeipiv qtetktitye ssqldgnavg dtgvlvsaqt
      661 itsesisttt tthitkmvkg gvsetriekr ivitgdadid hdealaqaik eakeqhpdms
      721 vtrvvvhket elaeeded
//
LOCUS       XP_041326088             738 aa            linear   VRT 06-MAY-2021
DEFINITION  band 4.1-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326088
VERSION     XP_041326088.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470154.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..738
                     /product="band 4.1-like protein 2 isoform X1"
                     /calculated_mol_wt=82824
     Region          208..397
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          392..485
                     /region_name="FERM_C_4_1_family"
                     /note="FERM domain C-lobe of Protein 4.1 family; cd13184"
                     /db_xref="CDD:270005"
     Site            order(401,418,420,426)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270005"
     Site            order(430,435..438,473,477,480..481)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Site            473..484
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Region          495..538
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     Region          625..731
                     /region_name="4_1_CTD"
                     /note="4.1 protein C-terminal domain (CTD); pfam05902"
                     /db_xref="CDD:461774"
     CDS             1..738
                     /gene="EPB41L2"
                     /coded_by="XM_041470154.1:315..2531"
                     /db_xref="GeneID:121355011"
ORIGIN      
        1 mttevgsete vkkdseqlgp hkakdrpeea setpgdqksr etssgeaqds svpaptskss
       61 pssqkkekss peskgisrfl ppwlkkqksy tlaepkdepk kratgeeqvv eesesqaleg
      121 vaqprkslee atenrqnaka ddkekhsvss aeiqpskedg keteveevae kkeesqeekr
      181 etkevqtaei kidnipqksp kkiktvqckv mlldgteyic dlekrargqv lfdkvcehln
      241 llekdyfgll fyenseqknw ldpskeikrq irslpwiftf nvkfyppdps qlteditryf
      301 lclqlrqdiv sgrlpcsfvt hallgsytlq aelgdhdpee hssdyisefq fapnqtqeme
      361 ekvaelhkth rgltpaqads qflenakrls mygvdlhhak dsegvdimlg vcanglliyk
      421 drlrinrfaw pkilkisykr snfyikvrpa eleqfestig fklpnhraak rlwkvcvehh
      481 tffrllspeq ppkakfltlg skfrysgrtq aqtrqasnli drpapyfert sskrvsrsld
      541 gapmgisdqs lvrdfsatgg qaagdkiidl eaagqaklke ggreedespl ktpqleltqd
      601 gkppvvktem vtisdatqrt eistkeipiv qtetktitye ssqldgnavg dtgvlvsaqt
      661 itsesisttt tthitkmvkg gvsetriekr ivitgdadid hdealaqaik eakeqhpdms
      721 vtrvvvhket elaeeded
//
LOCUS       XP_041326089             732 aa            linear   VRT 06-MAY-2021
DEFINITION  band 4.1-like protein 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326089
VERSION     XP_041326089.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470155.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..732
                     /product="band 4.1-like protein 2 isoform X2"
                     /calculated_mol_wt=82267
     Region          208..397
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          392..485
                     /region_name="FERM_C_4_1_family"
                     /note="FERM domain C-lobe of Protein 4.1 family; cd13184"
                     /db_xref="CDD:270005"
     Site            order(401,418,420,426)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270005"
     Site            order(430,435..438,473,477,480..481)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Site            473..484
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Region          495..538
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     Region          619..725
                     /region_name="4_1_CTD"
                     /note="4.1 protein C-terminal domain (CTD); pfam05902"
                     /db_xref="CDD:461774"
     CDS             1..732
                     /gene="EPB41L2"
                     /coded_by="XM_041470155.1:183..2381"
                     /db_xref="GeneID:121355011"
ORIGIN      
        1 mttevgsete vkkdseqlgp hkakdrpeea setpgdqksr etssgeaqds svpaptskss
       61 pssqkkekss peskgisrfl ppwlkkqksy tlaepkdepk kratgeeqvv eesesqaleg
      121 vaqprkslee atenrqnaka ddkekhsvss aeiqpskedg keteveevae kkeesqeekr
      181 etkevqtaei kidnipqksp kkiktvqckv mlldgteyic dlekrargqv lfdkvcehln
      241 llekdyfgll fyenseqknw ldpskeikrq irslpwiftf nvkfyppdps qlteditryf
      301 lclqlrqdiv sgrlpcsfvt hallgsytlq aelgdhdpee hssdyisefq fapnqtqeme
      361 ekvaelhkth rgltpaqads qflenakrls mygvdlhhak dsegvdimlg vcanglliyk
      421 drlrinrfaw pkilkisykr snfyikvrpa eleqfestig fklpnhraak rlwkvcvehh
      481 tffrllspeq ppkakfltlg skfrysgrtq aqtrqasnli drpapyfert sskrvsrsld
      541 gdqslvrdfs atggqaagdk iidleaagqa klkeggreed esplktpqle ltqdgkppvv
      601 ktemvtisda tqrteistke ipivqtetkt ityessqldg navgdtgvlv saqtitsesi
      661 sttttthitk mvkggvsetr iekrivitgd adidhdeala qaikeakeqh pdmsvtrvvv
      721 hketelaeed ed
//
LOCUS       XP_041326090             738 aa            linear   VRT 06-MAY-2021
DEFINITION  band 4.1-like protein 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326090
VERSION     XP_041326090.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470156.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..738
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..738
                     /product="band 4.1-like protein 2 isoform X1"
                     /calculated_mol_wt=82824
     Region          208..397
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          392..485
                     /region_name="FERM_C_4_1_family"
                     /note="FERM domain C-lobe of Protein 4.1 family; cd13184"
                     /db_xref="CDD:270005"
     Site            order(401,418,420,426)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270005"
     Site            order(430,435..438,473,477,480..481)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Site            473..484
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Region          495..538
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     Region          625..731
                     /region_name="4_1_CTD"
                     /note="4.1 protein C-terminal domain (CTD); pfam05902"
                     /db_xref="CDD:461774"
     CDS             1..738
                     /gene="EPB41L2"
                     /coded_by="XM_041470156.1:118..2334"
                     /db_xref="GeneID:121355011"
ORIGIN      
        1 mttevgsete vkkdseqlgp hkakdrpeea setpgdqksr etssgeaqds svpaptskss
       61 pssqkkekss peskgisrfl ppwlkkqksy tlaepkdepk kratgeeqvv eesesqaleg
      121 vaqprkslee atenrqnaka ddkekhsvss aeiqpskedg keteveevae kkeesqeekr
      181 etkevqtaei kidnipqksp kkiktvqckv mlldgteyic dlekrargqv lfdkvcehln
      241 llekdyfgll fyenseqknw ldpskeikrq irslpwiftf nvkfyppdps qlteditryf
      301 lclqlrqdiv sgrlpcsfvt hallgsytlq aelgdhdpee hssdyisefq fapnqtqeme
      361 ekvaelhkth rgltpaqads qflenakrls mygvdlhhak dsegvdimlg vcanglliyk
      421 drlrinrfaw pkilkisykr snfyikvrpa eleqfestig fklpnhraak rlwkvcvehh
      481 tffrllspeq ppkakfltlg skfrysgrtq aqtrqasnli drpapyfert sskrvsrsld
      541 gapmgisdqs lvrdfsatgg qaagdkiidl eaagqaklke ggreedespl ktpqleltqd
      601 gkppvvktem vtisdatqrt eistkeipiv qtetktitye ssqldgnavg dtgvlvsaqt
      661 itsesisttt tthitkmvkg gvsetriekr ivitgdadid hdealaqaik eakeqhpdms
      721 vtrvvvhket elaeeded
//
LOCUS       XP_041326091             943 aa            linear   VRT 06-MAY-2021
DEFINITION  band 4.1-like protein 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326091
VERSION     XP_041326091.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470157.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523648.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..943
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..943
                     /product="band 4.1-like protein 2 isoform X3"
                     /calculated_mol_wt=105554
     Region          208..397
                     /region_name="B41"
                     /note="Band 4.1 homologues; smart00295"
                     /db_xref="CDD:214604"
     Region          392..485
                     /region_name="FERM_C_4_1_family"
                     /note="FERM domain C-lobe of Protein 4.1 family; cd13184"
                     /db_xref="CDD:270005"
     Site            order(401,418,420,426)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:270005"
     Site            order(430,435..438,473,477,480..481)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Site            473..484
                     /site_type="other"
                     /note="putative actin binding site 2 [polypeptide
                     binding]"
                     /db_xref="CDD:270005"
     Region          495..538
                     /region_name="FA"
                     /note="FERM adjacent (FA); pfam08736"
                     /db_xref="CDD:462582"
     Region          830..936
                     /region_name="4_1_CTD"
                     /note="4.1 protein C-terminal domain (CTD); pfam05902"
                     /db_xref="CDD:461774"
     CDS             1..943
                     /gene="EPB41L2"
                     /coded_by="XM_041470157.1:183..3014"
                     /db_xref="GeneID:121355011"
ORIGIN      
        1 mttevgsete vkkdseqlgp hkakdrpeea setpgdqksr etssgeaqds svpaptskss
       61 pssqkkekss peskgisrfl ppwlkkqksy tlaepkdepk kratgeeqvv eesesqaleg
      121 vaqprkslee atenrqnaka ddkekhsvss aeiqpskedg keteveevae kkeesqeekr
      181 etkevqtaei kidnipqksp kkiktvqckv mlldgteyic dlekrargqv lfdkvcehln
      241 llekdyfgll fyenseqknw ldpskeikrq irslpwiftf nvkfyppdps qlteditryf
      301 lclqlrqdiv sgrlpcsfvt hallgsytlq aelgdhdpee hssdyisefq fapnqtqeme
      361 ekvaelhkth rgltpaqads qflenakrls mygvdlhhak dsegvdimlg vcanglliyk
      421 drlrinrfaw pkilkisykr snfyikvrpa eleqfestig fklpnhraak rlwkvcvehh
      481 tffrllspeq ppkakfltlg skfrysgrtq aqtrqasnli drpapyfert sskrvsrsld
      541 gapmgisdqs lvrdfsatgg qaagdkiidl eaagqaklke ggreedespl ktpqleltqd
      601 gkrhasraeg pctgvsdadk sshetldive ekkqaefgie etlvvdetnk gkmqvatdag
      661 etckvehvsk kdssslpsds sssssssese deevgeyhph hraieevire eqeeeedmkr
      721 keheentqhv eaipegskln vpvehtqvta edlvqentit vateeknlse qikqdvgeek
      781 eeeqlklngd vshvdidvap qliccseppv vktemvtisd atqrteistk eipivqtetk
      841 tityessqld gnavgdtgvl vsaqtitses isttttthit kmvkggvset riekrivitg
      901 dadidhdeal aqaikeakeq hpdmsvtrvv vhketelaee ded
//
LOCUS       XP_041326093            1024 aa            linear   VRT 06-MAY-2021
DEFINITION  leucyl-cystinyl aminopeptidase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326093
VERSION     XP_041326093.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470159.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1024
                     /product="leucyl-cystinyl aminopeptidase isoform X1"
                     /calculated_mol_wt=117475
     Region          175..611
                     /region_name="M1_APN-Q_like"
                     /note="Peptidase M1 aminopeptidase N catalytic domain
                     family which includes aminopeptidase N (APN),
                     aminopeptidase Q (APQ), tricorn interacting factor F3, and
                     endoplasmic reticulum aminopeptidase 1 (ERAP1); cd09601"
                     /db_xref="CDD:341064"
     Site            order(293,295,428..431,464..465,468,487,491,544,549)
                     /site_type="active"
                     /db_xref="CDD:341064"
     Region          689..1008
                     /region_name="ERAP1_C"
                     /note="ERAP1-like C-terminal domain; pfam11838"
                     /db_xref="CDD:463368"
     CDS             1..1024
                     /gene="LOC121355019"
                     /coded_by="XM_041470159.1:236..3310"
                     /db_xref="GeneID:121355019"
ORIGIN      
        1 mepfpsdriq lprnmiensm feeepdvvdl akepclhple pdeveyeprs srllvrglge
       61 hemdddeedy essakllgms fmnrssglqn nmsayrqnpn gscsvpstrt mvvctvvfvi
      121 afsliiviyl lpkctftkeg chkknhtmel iyplatngkl fpwakirlpp dvvplhydlv
      181 lqpnlttlkf agsvkivvni rhvtrkivlh ssglnitkat itsaqgqqtk pvefleyplh
      241 dqialmapea llagqnytvd meyssnlsdt yygfykisyk denskqrwfa atqfeplaar
      301 safpcfdepa lkatflikik rdeklstlsn mpkkastpvt ngivqdeffv slkmstylva
      361 fvvadlknis retngtlvsv yaipqhlnqv gyaldtavkl lefyqkyffm kyplekldlv
      421 aipdfqsgam enwglitfre ttllfdknts svrdkklita viahelahqw fgnlvtmeww
      481 ndlwlnegfa tfmeyfamee vfpelrsded fltlvfkamm kdalnsshpv sssvqsseqi
      541 eemfdalsyi kgaslllmlk hyltkdvfqa gievylhnhn ygtaqsddlw dsmneitngt
      601 ldvkkmmktw imhkgfplvt vvrkgkiisv qqekflyrve penwtsdasy lwhipltyit
      661 nrcnfthctn aylldqksav ielpeevewi kfnvdmngyy ivdyaedwkt lidlmkknht
      721 alspkdranl innifnlerl greslekafe lidylnkens tapltqalfq lsliyslldk
      781 kgeqqlaarv mhriehllgd kmdqqhwtdd gtlserelrs tllafacthd irncrktaae
      841 mfetwmksdg tkslpsdvmk aifgvgaksd dgwefllkmy fssvseteks kmiealaste
      901 darkliwlmq nslegeiirs qelshiiati sqnlpgylla wdfvkenwek ltrkfhlgsy
      961 tiqniitwst sqfatkahll evksffesks dessqlhcvk eaidtiqlni qwmernlakl
     1021 qdll
//
LOCUS       XP_041326094            1010 aa            linear   VRT 06-MAY-2021
DEFINITION  leucyl-cystinyl aminopeptidase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326094
VERSION     XP_041326094.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470160.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1010
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1010
                     /product="leucyl-cystinyl aminopeptidase isoform X2"
                     /calculated_mol_wt=115793
     Region          161..597
                     /region_name="M1_APN-Q_like"
                     /note="Peptidase M1 aminopeptidase N catalytic domain
                     family which includes aminopeptidase N (APN),
                     aminopeptidase Q (APQ), tricorn interacting factor F3, and
                     endoplasmic reticulum aminopeptidase 1 (ERAP1); cd09601"
                     /db_xref="CDD:341064"
     Site            order(279,281,414..417,450..451,454,473,477,530,535)
                     /site_type="active"
                     /db_xref="CDD:341064"
     Region          675..994
                     /region_name="ERAP1_C"
                     /note="ERAP1-like C-terminal domain; pfam11838"
                     /db_xref="CDD:463368"
     CDS             1..1010
                     /gene="LOC121355019"
                     /coded_by="XM_041470160.1:285..3317"
                     /db_xref="GeneID:121355019"
ORIGIN      
        1 miensmfeee pdvvdlakep clhplepdev eyeprssrll vrglgehemd ddeedyessa
       61 kllgmsfmnr ssglqnnmsa yrqnpngscs vpstrtmvvc tvvfviafsl iiviyllpkc
      121 tftkegchkk nhtmeliypl atngklfpwa kirlppdvvp lhydlvlqpn lttlkfagsv
      181 kivvnirhvt rkivlhssgl nitkatitsa qgqqtkpvef leyplhdqia lmapeallag
      241 qnytvdmeys snlsdtyygf ykisykdens kqrwfaatqf eplaarsafp cfdepalkat
      301 flikikrdek lstlsnmpkk astpvtngiv qdeffvslkm stylvafvva dlknisretn
      361 gtlvsvyaip qhlnqvgyal dtavkllefy qkyffmkypl ekldlvaipd fqsgamenwg
      421 litfrettll fdkntssvrd kklitaviah elahqwfgnl vtmewwndlw lnegfatfme
      481 yfameevfpe lrsdedfltl vfkammkdal nsshpvsssv qsseqieemf dalsyikgas
      541 lllmlkhylt kdvfqagiev ylhnhnygta qsddlwdsmn eitngtldvk kmmktwimhk
      601 gfplvtvvrk gkiisvqqek flyrvepenw tsdasylwhi pltyitnrcn fthctnayll
      661 dqksavielp eevewikfnv dmngyyivdy aedwktlidl mkknhtalsp kdranlinni
      721 fnlerlgres lekafelidy lnkenstapl tqalfqlsli yslldkkgeq qlaarvmhri
      781 ehllgdkmdq qhwtddgtls erelrstlla facthdirnc rktaaemfet wmksdgtksl
      841 psdvmkaifg vgaksddgwe fllkmyfssv setekskmie alastedark liwlmqnsle
      901 geiirsqels hiiatisqnl pgyllawdfv kenwekltrk fhlgsytiqn iitwstsqfa
      961 tkahllevks ffesksdess qlhcvkeaid tiqlniqwme rnlaklqdll
//
LOCUS       XP_041326095             660 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF38 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326095
VERSION     XP_041326095.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470161.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..660
                     /product="E3 ubiquitin-protein ligase RNF38 isoform X1"
                     /calculated_mol_wt=71216
     Region          <292..>552
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          586..652
                     /region_name="RING-H2_RNF38"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 38 (RNF38) and similar proteins; cd16679"
                     /db_xref="CDD:438341"
     Site            order(604,607,609,628,646..649)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     Site            order(609..613,634,637..638,646,649)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     CDS             1..660
                     /gene="RNF38"
                     /coded_by="XM_041470161.1:260..2242"
                     /db_xref="GeneID:121355020"
ORIGIN      
        1 mpvaarsaap gaqpdagfha parqrdrgva prgeesgger hhrqageagr rgrwvassaa
       61 pflpafsssp ppppassvas spaggtavaa stspsaasll palpqtrarv rscsgfpgla
      121 msggsgrlpp paalcppppl hgpslpeaga rsqgrgspag hgaprgapgs rapppgsigt
      181 afqchsihqd hicaddsdks edspspkrqr lshsvfdytt aspapsppmr pwemtsnrqp
      241 plarpnqhhf sgercntpar nrrsppvrrq rtrrdrlsrh nsisqdenyh hlsygqqqai
      301 eeprafrppn vsprmlhpaa hppqqnavmv dihdqihqgt vpvsytvttv aphgiplctg
      361 qhipacstqq vpgcsvvfsg qhlpvcsvpp pmlqacsvqh lpvpyaafpp lissdpfllh
      421 pphisthhpp hlpppgqfvp fqaqqsrspl qriendvell gehlpvggft yppsahpptl
      481 ppsaplqfla hdplhqevsf gvpyppfmpr rltgrsryrs qqpipphpyh psllpyvlsm
      541 lpvppavgpa fsfeldvedg evenyealln laerlgeakp rgltkadieq lpsyrfnpnn
      601 hqseqtlcvv cmcdfesrql lrvlpcnhef hakcvdkwlk anrtcpicra dasevhrdse
//
LOCUS       XP_041326096             604 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF38 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326096
VERSION     XP_041326096.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470162.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..604
                     /product="E3 ubiquitin-protein ligase RNF38 isoform X2"
                     /calculated_mol_wt=65502
     Region          156..>496
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          530..596
                     /region_name="RING-H2_RNF38"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 38 (RNF38) and similar proteins; cd16679"
                     /db_xref="CDD:438341"
     Site            order(548,551,553,572,590..593)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     Site            order(553..557,578,581..582,590,593)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     CDS             1..604
                     /gene="RNF38"
                     /coded_by="XM_041470162.1:262..2076"
                     /db_xref="GeneID:121355020"
ORIGIN      
        1 mpvaarsaap gaqpdagfha parqrdrgva prgeesgger hhrqageagr rgrwvassaa
       61 pflpafsssp ppppassvas spaggtavaa stspsaasll palpqtrarv rscsgfpgla
      121 msggsgrlpp paalcppppl hgpslpeaga rsqgrgspag hgaprgapgs rapppgsigt
      181 afqchsihqd hicaddsdks edspspkrqr lshsvfdytt aspapsppmr pwemtsnrqp
      241 plarpnqhhf sgercntpar nrrsppvrrq rtrrdrlsrh nsisqdenyh hlsygqqqai
      301 eeprafrppn vsprmlhpaa hppqqnavmv dihdqmlqac svqhlpvpya afpplissdp
      361 fllhpphist hhpphlpppg qfvpfqaqqs rsplqriend vellgehlpv ggftyppsah
      421 pptlppsapl qflahdplhq evsfgvpypp fmprrltgrs ryrsqqpipp hpyhpsllpy
      481 vlsmlpvppa vgpafsfeld vedgevenye allnlaerlg eakprgltka dieqlpsyrf
      541 npnnhqseqt lcvvcmcdfe srqllrvlpc nhefhakcvd kwlkanrtcp icradasevh
      601 rdse
//
LOCUS       XP_041326097             501 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF38 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326097
VERSION     XP_041326097.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470163.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..501
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..501
                     /product="E3 ubiquitin-protein ligase RNF38 isoform X3"
                     /calculated_mol_wt=55793
     Region          39..>393
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          427..493
                     /region_name="RING-H2_RNF38"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 38 (RNF38) and similar proteins; cd16679"
                     /db_xref="CDD:438341"
     Site            order(445,448,450,469,487..490)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     Site            order(450..454,475,478..479,487,490)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     CDS             1..501
                     /gene="RNF38"
                     /coded_by="XM_041470163.1:169..1674"
                     /db_xref="GeneID:121355020"
ORIGIN      
        1 mvvgvfgrag scllekgsig tafqchsihq dhicaddsdk sedspspkrq rlshsvfdyt
       61 taspapsppm rpwemtsnrq pplarpnqhh fsgercntpa rnrrsppvrr qrtrrdrlsr
      121 hnsisqdeny hhlsygqqqa ieeprafrpp nvsprmlhpa ahppqqnavm vdihdqihqg
      181 tvpvsytvtt vaphgiplct gqhipacstq qvpgcsvvfs gqhlpvcsvp ppmlqacsvq
      241 hlpvpyaafp plissdpfll hpphisthhp phlpppgqfv pfqaqqsrsp lqriendvel
      301 lgehlpvggf typpsahppt lppsaplqfl ahdplhqevs fgvpyppfmp rrltgrsryr
      361 sqqpipphpy hpsllpyvls mlpvppavgp afsfeldved gevenyeall nlaerlgeak
      421 prgltkadie qlpsyrfnpn nhqseqtlcv vcmcdfesrq llrvlpcnhe fhakcvdkwl
      481 kanrtcpicr adasevhrds e
//
LOCUS       XP_041326098             432 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF38 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326098
VERSION     XP_041326098.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470164.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..432
                     /product="E3 ubiquitin-protein ligase RNF38 isoform X4"
                     /calculated_mol_wt=48453
     Region          <64..>324
                     /region_name="Atrophin-1"
                     /note="Atrophin-1 family; pfam03154"
                     /db_xref="CDD:460830"
     Region          358..424
                     /region_name="RING-H2_RNF38"
                     /note="RING finger, H2 subclass, found in RING finger
                     protein 38 (RNF38) and similar proteins; cd16679"
                     /db_xref="CDD:438341"
     Site            order(376,379,381,400,418..421)
                     /site_type="other"
                     /note="ubiquitin binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     Site            order(381..385,406,409..410,418,421)
                     /site_type="other"
                     /note="E2 binding site [polypeptide binding]"
                     /db_xref="CDD:438341"
     CDS             1..432
                     /gene="RNF38"
                     /coded_by="XM_041470164.1:400..1698"
                     /db_xref="GeneID:121355020"
ORIGIN      
        1 mrpwemtsnr qpplarpnqh hfsgercntp arnrrsppvr rqrtrrdrls rhnsisqden
       61 yhhlsygqqq aieeprafrp pnvsprmlhp aahppqqnav mvdihdqihq gtvpvsytvt
      121 tvaphgiplc tgqhipacst qqvpgcsvvf sgqhlpvcsv pppmlqacsv qhlpvpyaaf
      181 pplissdpfl lhpphisthh pphlpppgqf vpfqaqqsrs plqriendve llgehlpvgg
      241 ftyppsahpp tlppsaplqf lahdplhqev sfgvpyppfm prrltgrsry rsqqpipphp
      301 yhpsllpyvl smlpvppavg pafsfeldve dgevenyeal lnlaerlgea kprgltkadi
      361 eqlpsyrfnp nnhqseqtlc vvcmcdfesr qllrvlpcnh efhakcvdkw lkanrtcpic
      421 radasevhrd se
//
LOCUS       XP_041326099             336 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326099
VERSION     XP_041326099.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470165.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="acrosin-like isoform X1"
                     /calculated_mol_wt=36224
     Region          38..274
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            38
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(85,135,229)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(223,250,252)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..336
                     /gene="LOC121355021"
                     /coded_by="XM_041470165.1:1166..2176"
                     /db_xref="GeneID:121355021"
ORIGIN      
        1 millsillll alcgpahgtc gqtcglrpmg ttisstrvvg gtdvmpgtga wagiasvrcy
       61 wnppvsvhvc ggtlvspqwl ltaahcfini tnplsewaiv lgatslaqsg pdvevrrikr
      121 lvfhekyrpn lehhdvamve ldqpvqcrss iqlaclpgps vkvselkncy vagwgdrivk
      181 asgkdilqqa kvqvvdnqlc nssewlqgyi hdfnvcagqg gvgtcqgdsg gplvcqdkna
      241 gffwqigvts wgvgcarpkr pavssstqyy ynwiwskmgr kpapattpap aptltaapav
      301 titprpiqpc pfprekllqf fnllkdilry lkgklf
//
LOCUS       XP_041326100             336 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326100
VERSION     XP_041326100.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470166.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..336
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..336
                     /product="acrosin-like isoform X1"
                     /calculated_mol_wt=36224
     Region          38..274
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            38
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(85,135,229)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(223,250,252)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..336
                     /gene="LOC121355021"
                     /coded_by="XM_041470166.1:1046..2056"
                     /db_xref="GeneID:121355021"
ORIGIN      
        1 millsillll alcgpahgtc gqtcglrpmg ttisstrvvg gtdvmpgtga wagiasvrcy
       61 wnppvsvhvc ggtlvspqwl ltaahcfini tnplsewaiv lgatslaqsg pdvevrrikr
      121 lvfhekyrpn lehhdvamve ldqpvqcrss iqlaclpgps vkvselkncy vagwgdrivk
      181 asgkdilqqa kvqvvdnqlc nssewlqgyi hdfnvcagqg gvgtcqgdsg gplvcqdkna
      241 gffwqigvts wgvgcarpkr pavssstqyy ynwiwskmgr kpapattpap aptltaapav
      301 titprpiqpc pfprekllqf fnllkdilry lkgklf
//
LOCUS       XP_041326101             265 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326101
VERSION     XP_041326101.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470167.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..265
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..265
                     /product="acrosin-like isoform X2"
                     /calculated_mol_wt=28826
     Region          16..203
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(17,64,158)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(152,179,181)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..265
                     /gene="LOC121355021"
                     /coded_by="XM_041470167.1:1166..1963"
                     /db_xref="GeneID:121355021"
ORIGIN      
        1 millsillll alcgpahgtc gplsewaivl gatslaqsgp dvevrrikrl vfhekyrpnl
       61 ehhdvamvel dqpvqcrssi qlaclpgpsv kvselkncyv agwgdrivka sgkdilqqak
      121 vqvvdnqlcn ssewlqgyih dfnvcagqgg vgtcqgdsgg plvcqdknag ffwqigvtsw
      181 gvgcarpkrp avssstqyyy nwiwskmgrk papattpapa ptltaapavt itprpiqpcp
      241 fprekllqff nllkdilryl kgklf
//
LOCUS       XP_041326102             465 aa            linear   VRT 06-MAY-2021
DEFINITION  SH2 domain-containing adapter protein B [Pyrgilauda ruficollis].
ACCESSION   XP_041326102
VERSION     XP_041326102.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470168.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523649.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="SH2 domain-containing adapter protein B"
                     /calculated_mol_wt=51731
     Region          364..460
                     /region_name="SH2"
                     /note="Src homology 2 (SH2) domain; cl15255"
                     /db_xref="CDD:472789"
     Site            order(373,391,412,414)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198173"
     Site            order(413,440)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198173"
     CDS             1..465
                     /gene="SHB"
                     /coded_by="XM_041470168.1:92..1489"
                     /db_xref="GeneID:121355023"
ORIGIN      
        1 makwlnkyfs lgnsktkspp qpprpdyrek rngagsaprp egpphlhlhh hhtspgfsrr
       61 rlrddtsdll rayraqkdrd fedpysgpgs slrklramcr pdysapedlg eaalkassss
      121 ssssccatpp ttgsphlfrs hserrpatpp dvkyispkhr likvesgagg sdgagkklsk
      181 gskqptvaap samkdkvlia ddysdpfdak sesnrmgkge ntgymepyea qrimaefqqq
      241 egmkshqknm qlydtpyepe gsgvesdses vvsrrlresk lpqdddrpad eydqpwewnk
      301 vsipalaaqf ngsgkrqasp spsndqhrql rapgggfkpi khgspefcgi lgeridptiq
      361 lekqiwyhga isrtdaenll rlckecsylv rnsqtskhdy slslkssqgf mhmkltktke
      421 kyilgqnspp fdsvpevihy yttkklpikg aehlsllypv avrtl
//
LOCUS       XP_041326103             116 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosome biogenesis protein NOP53, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326103
VERSION     XP_041326103.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470169.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523661.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>116
                     /product="ribosome biogenesis protein NOP53"
     Region          49..>116
                     /region_name="Nop53"
                     /note="Nop53 (60S ribosomal biogenesis); pfam07767"
                     /db_xref="CDD:462259"
     CDS             1..116
                     /gene="NOP53"
                     /coded_by="XM_041470169.1:54..>403"
                     /db_xref="GeneID:121355024"
ORIGIN      
        1 maaaesflaf npagragaaa asrrrsrgpr nrkkgwkrws grearlgrei gdfledvglq
       61 eraagglise qpnedlffld tgstpksrpl rkkkppqkpl hvdlvlqpls kvpppk
//
LOCUS       XP_041326105             235 aa            linear   VRT 06-MAY-2021
DEFINITION  elongation factor 1-gamma, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326105
VERSION     XP_041326105.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470171.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523683.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>235
                     /product="elongation factor 1-gamma"
     Region          123..227
                     /region_name="EF1G"
                     /note="Elongation factor 1 gamma, conserved domain;
                     pfam00647"
                     /db_xref="CDD:459888"
     CDS             1..235
                     /gene="EEF1G"
                     /coded_by="XM_041470171.1:<1..>706"
                     /db_xref="GeneID:121355025"
ORIGIN      
        1 lkklskknef slnlktfpea knrsknphfh pffpfknpqi ntiffgvkka kkfaesqark
       61 ekekekeppr kekepprrek kekererere rekhsprree rrappqeeld eceqvlaaep
      121 kakdpfahlp kspfvldefk rkysnedtls valphfwehf dregwslwyc qyrypeelsq
      181 tfmscnlitg mfqrldklrk nafasvvlfg kdhdssisgv wvlrgqelaf tvrnp
//
LOCUS       XP_041326106             313 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355026 [Pyrgilauda ruficollis].
ACCESSION   XP_041326106
VERSION     XP_041326106.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470172.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="uncharacterized protein LOC121355026"
                     /calculated_mol_wt=32278
     CDS             1..313
                     /gene="LOC121355026"
                     /coded_by="XM_041470172.1:673..1614"
                     /db_xref="GeneID:121355026"
ORIGIN      
        1 mgsplpnsat apgaalgttf assrcaasfp srlsvageag waqprpvpel shqgwfwwmp
       61 gssatslppl scapgmvlvd argagtgaeq chqpatpqlc prdgfggcqg cwhrgravpp
      121 achpsavpqg wfwwmpgvla qgqssatslp plscapgmvl vdargagtga eqchqpatpq
      181 lcprdgfggc qgcwhrgrav ppachpsavp qgwfwwmpgv laqgqssats lpplscapgm
      241 vlvdargagt gaeqchpsav phargspsll pppgirftgl fffffpfshf flstsccpsa
      301 rgtvpplcwa pgr
//
LOCUS       XP_041326107             183 aa            linear   VRT 06-MAY-2021
DEFINITION  ubiquitin-conjugating enzyme E2 H [Pyrgilauda ruficollis].
ACCESSION   XP_041326107
VERSION     XP_041326107.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470173.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..183
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..183
                     /product="ubiquitin-conjugating enzyme E2 H"
                     /calculated_mol_wt=20524
     Region          9..145
                     /region_name="UBCc_UBE2H"
                     /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc)
                     domain of ubiquitin-conjugating enzyme E2 H and related
                     proteins; cd23797"
                     /db_xref="CDD:467417"
     CDS             1..183
                     /gene="UBE2H"
                     /coded_by="XM_041470173.1:234..785"
                     /db_xref="GeneID:121355027"
ORIGIN      
        1 msspspgkrr mdtdvvklie skhevtilgg lnefvvkfyg pqgtpyeggv wkvrvdlpdk
       61 ypfkspsigf mnkifhpnid easgtvcldv inqtwtalyd ltnifesflp qllaypnpid
      121 plngdaaamy lhrpeeykqk ikeyiqkyat eealkeqeeg tgdsssessm sdfsedeaqd
      181 mel
//
LOCUS       XP_041326108             219 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-15 receptor subunit alpha [Pyrgilauda ruficollis].
ACCESSION   XP_041326108
VERSION     XP_041326108.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470174.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..219
                     /product="interleukin-15 receptor subunit alpha"
                     /calculated_mol_wt=23026
     Region          27..88
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(37,55)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..219
                     /gene="IL15RA"
                     /coded_by="XM_041470174.1:495..1154"
                     /db_xref="GeneID:121355028"
ORIGIN      
        1 maprllpllc gtaallllra aadtahcsrp kavanahida gnrtelnsrl ryscnpgykr
       61 kagtssliqc ilwngseprw tdptlqcird palswethgl esttqragtt gaspnsspsp
      121 assqspvppa pdglspdgsr ppetiptldt smlgegttpp pipptdyaav siqsvassvg
      181 klggkknnff gkrayfnffk lkiplgavga lfhgqrech
//
LOCUS       XP_041326109             871 aa            linear   VRT 06-MAY-2021
DEFINITION  coatomer subunit gamma-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326109
VERSION     XP_041326109.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470175.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..871
                     /product="coatomer subunit gamma-2 isoform X1"
                     /calculated_mol_wt=97284
     Region          7..866
                     /region_name="SEC21"
                     /note="Vesicle coat complex COPI, gamma subunit
                     [Intracellular trafficking and secretion]; COG5240"
                     /db_xref="CDD:227565"
     Region          288..313
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          323..354
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          363..385
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          398..423
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          435..461
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          471..501
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          508..534
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..871
                     /gene="COPG2"
                     /coded_by="XM_041470175.1:83..2698"
                     /db_xref="GeneID:121355029"
ORIGIN      
        1 mikkfdkkde esgsgsnpfq hleksavlqe arlfnetpin prrclhiltk ilyllnqgeh
       61 fgtteateaf famtrlfqsn dqtlrrmcyl tikemanise dviivtsslt kdmtgkedvy
      121 rgpairalcr itdgtmlqai erymkqaivd kvpgvsssal vsslhmmkis ydvvkrwine
      181 aqeaassdni mvqyhalgll yhlrksdrla vskmlnkftk sglksqfayc mliriaskll
      241 keseeghesp lfdfiesclr nkhemviyea asaiihlpnc tarelapavs vlqlfcsspk
      301 pvlryaavrt lnkvamkhps avtacnldle nlitdsnrsi atlaittllk tgsessvdrl
      361 mkqissfvse isdefkvvvv qaisalcqky prkhsvmmtf lsnmlrddgg feykraivdc
      421 iisiieenpe skeaglahlc efiedcehtv latkilhllg kegprtpsps kyirfifnrv
      481 vleneavraa avsalakfga qnenllpsil vllqrcmmds ddevrdratf ylnvlqqrql
      541 alnaayifng ltvsvpgmek alhqytleps ekpfdmktvp latapifeqk aeialvtskp
      601 ekvapsrqdi fqeqlaaipe fkglgplfks sepvqlteee teyfvrcikh vfpahivfqf
      661 dctntlndql lervtvqmep sdgydvicci papslaynqp gmcytlvrip qddptavact
      721 fsctmkftvr dcdpstgvpe edgyedeyvl edlevtvsdh lqkvlkpnfa aaweevgddf
      781 ekeetfalss iktldeavnn iikflgmqpc ersdkvpenk nshtlylagv yrggcdvlvr
      841 srlalgdgvt mqvtvrskde asvdvilasv g
//
LOCUS       XP_041326110             871 aa            linear   VRT 06-MAY-2021
DEFINITION  coatomer subunit gamma-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326110
VERSION     XP_041326110.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470176.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..871
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..871
                     /product="coatomer subunit gamma-2 isoform X2"
                     /calculated_mol_wt=97284
     Region          7..866
                     /region_name="SEC21"
                     /note="Vesicle coat complex COPI, gamma subunit
                     [Intracellular trafficking and secretion]; COG5240"
                     /db_xref="CDD:227565"
     Region          288..313
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          323..354
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          363..385
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          398..423
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          435..461
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          471..501
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          508..534
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..871
                     /gene="COPG2"
                     /coded_by="XM_041470176.1:83..2698"
                     /db_xref="GeneID:121355029"
ORIGIN      
        1 mikkfdkkde esgsgsnpfq hleksavlqe arlfnetpin prrclhiltk ilyllnqgeh
       61 fgtteateaf famtrlfqsn dqtlrrmcyl tikemanise dviivtsslt kdmtgkedvy
      121 rgpairalcr itdgtmlqai erymkqaivd kvpgvsssal vsslhmmkis ydvvkrwine
      181 aqeaassdni mvqyhalgll yhlrksdrla vskmlnkftk sglksqfayc mliriaskll
      241 keseeghesp lfdfiesclr nkhemviyea asaiihlpnc tarelapavs vlqlfcsspk
      301 pvlryaavrt lnkvamkhps avtacnldle nlitdsnrsi atlaittllk tgsessvdrl
      361 mkqissfvse isdefkvvvv qaisalcqky prkhsvmmtf lsnmlrddgg feykraivdc
      421 iisiieenpe skeaglahlc efiedcehtv latkilhllg kegprtpsps kyirfifnrv
      481 vleneavraa avsalakfga qnenllpsil vllqrcmmds ddevrdratf ylnvlqqrql
      541 alnaayifng ltvsvpgmek alhqytleps ekpfdmktvp latapifeqk aeialvtskp
      601 ekvapsrqdi fqeqlaaipe fkglgplfks sepvqlteee teyfvrcikh vfpahivfqf
      661 dctntlndql lervtvqmep sdgydvicci papslaynqp gmcytlvrip qddptavact
      721 fsctmkftvr dcdpstgvpe edgyedeyvl edlevtvsdh lqkvlkpnfa aaweevgddf
      781 ekeetfalss iktldeavnn iikflgmqpc ersdkvpenk nshtlylagv yrggcdvlvr
      841 srlalgdgvt mqvtvrskde asvdvilasv g
//
LOCUS       XP_041326111             326 aa            linear   VRT 06-MAY-2021
DEFINITION  mesoderm-specific transcript homolog protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326111
VERSION     XP_041326111.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470177.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="mesoderm-specific transcript homolog protein
                     isoform X1"
                     /calculated_mol_wt=37180
     Region          36..325
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..326
                     /gene="MEST"
                     /coded_by="XM_041470177.1:23..1003"
                     /db_xref="GeneID:121355030"
ORIGIN      
        1 mkewwlqvgl lgvpllavyl hipppqlspa lrswkssgsf ftykdlnify rdssgavgss
       61 dvvvllhgfp tssydwskiw egltqrfhrv ialdflgfgf sdkprphgys ifeqativeg
      121 llrhlglrhq rinllshdyg dtvaqellhr yehnktgsil inslclsngg ifpetnyprf
      181 iqkllkdggl lsplllrlmn ffffsgglra vfgpytqpsq aefwdmwtav rnndgnlvmd
      241 silqyinqrk khrerwvgal mstsvplhli ygpldpvnph peflqlykkv lpmstvsvld
      301 dhishypqle dpmgflnayl nfinsf
//
LOCUS       XP_041326112             326 aa            linear   VRT 06-MAY-2021
DEFINITION  mesoderm-specific transcript homolog protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326112
VERSION     XP_041326112.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470178.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="mesoderm-specific transcript homolog protein
                     isoform X2"
                     /calculated_mol_wt=37180
     Region          36..325
                     /region_name="MenH"
                     /note="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase MenH and related
                     esterases, alpha/beta hydrolase fold [Coenzyme transport
                     and metabolism, General function prediction only];
                     COG0596"
                     /db_xref="CDD:440361"
     CDS             1..326
                     /gene="MEST"
                     /coded_by="XM_041470178.1:62..1042"
                     /db_xref="GeneID:121355030"
ORIGIN      
        1 mkewwlqvgl lgvpllavyl hipppqlspa lrswkssgsf ftykdlnify rdssgavgss
       61 dvvvllhgfp tssydwskiw egltqrfhrv ialdflgfgf sdkprphgys ifeqativeg
      121 llrhlglrhq rinllshdyg dtvaqellhr yehnktgsil inslclsngg ifpetnyprf
      181 iqkllkdggl lsplllrlmn ffffsgglra vfgpytqpsq aefwdmwtav rnndgnlvmd
      241 silqyinqrk khrerwvgal mstsvplhli ygpldpvnph peflqlykkv lpmstvsvld
      301 dhishypqle dpmgflnayl nfinsf
//
LOCUS       XP_041326113             860 aa            linear   VRT 06-MAY-2021
DEFINITION  striatin-interacting protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326113
VERSION     XP_041326113.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470179.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..860
                     /product="striatin-interacting protein 2"
                     /calculated_mol_wt=98607
     Region          77..>294
                     /region_name="N1221"
                     /note="N1221-like protein; pfam07923"
                     /db_xref="CDD:429737"
     Region          482..808
                     /region_name="DUF3402"
                     /note="Domain of unknown function (DUF3402); pfam11882"
                     /db_xref="CDD:463384"
     CDS             1..860
                     /gene="STRIP2"
                     /coded_by="XM_041470179.1:16..2598"
                     /db_xref="GeneID:121355032"
ORIGIN      
        1 mggagrggar ppragggrgm eaaggggapg pgrarpgqpq pqpqpqtqpq tqpqpqpkgr
       61 elfrsqrkes egsvdcpnle feygdadghg aelaelysyt eepelshnrr cfeedfhtqv
      121 pdrrwleldr aqqkayvmrl ldglevvnrd krlrvarail ylaqgvfgdc dnegdvlhws
      181 rhnsfllyql gtfsaflell nmeiensqac ssalrkpais ladstelrvl lsvmylmven
      241 irveqetdpp ewktcretfr melsfpvhte epfalllftm vtkfcsghap hfpmkkvlll
      301 lwkvllftlg gfealqamkv rrreelglpp lpedsiqvvr gmraasppty aielveqqqq
      361 qqqqqqqqkr shrsrrplmk qdsldiyner dpfkndeggv deeesddvds giegeldlle
      421 rdaiiaavpa qrppiervsf pkglpwapkv rqkdiehfle asrnkfigft lgqdtetlig
      481 lprpihesvk tlkqhkyvsi sdvqikneee lekcpmslge eevqetpcev lyramlynlp
      541 qymiallkil laaaptskak tdsiniladv lpeempitvl qsmklgmdvn rhkeiivksi
      601 sallllllkh fklnhiyqfe yvsqhlvfan ciplilkffn qnimsyitak nsisvldyph
      661 ctvcdlpelt aesleagdnn qfcwrnlfsc inllrilnkl tkwkhsrtmm lvvfksapil
      721 kralkvkqam mqlyvlkllk iqtkylgrqw rksnmktmsa iyqkvrhrmn ddwaygndid
      781 arpwdfqaee ctlranieaf nsrrydkpqd sefapvdncl qsvlgqrlel pedfhysyel
      841 wlerevfsqp irweellhcq
//
LOCUS       XP_041326114             419 aa            linear   VRT 06-MAY-2021
DEFINITION  carboxypeptidase A1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326114
VERSION     XP_041326114.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470180.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..419
                     /product="carboxypeptidase A1-like"
                     /calculated_mol_wt=47077
     Region          26..100
                     /region_name="Propep_M14"
                     /note="Carboxypeptidase activation peptide; pfam02244"
                     /db_xref="CDD:460505"
     Region          117..417
                     /region_name="M14_CPA"
                     /note="Peptidase M14 carboxypeptidase subfamily A/B-like;
                     Carboxypeptidase A subgroup; cd03870"
                     /db_xref="CDD:349442"
     Site            order(179,182,237,254..255,306,358,360,380)
                     /site_type="active"
                     /db_xref="CDD:349442"
     Site            order(181..182,237,273,306..308,349,354,356..359,380,389)
                     /site_type="active"
                     /note="inhibitor binding interface [active]"
                     /db_xref="CDD:349442"
     CDS             1..419
                     /gene="LOC121355033"
                     /coded_by="XM_041470180.1:98..1357"
                     /db_xref="GeneID:121355033"
ORIGIN      
        1 metllvflal lgvssteqlf vgdqvlrvta rneehiallg vlgeqeelqv dfwhhpnslg
       61 hpvdlrvpfp slqgvkkfld shnfsysimi edvqelldee kesmrrsrrv krssrmfdft
      121 syhtideiye wmdglvedhp slvskiqigq syehrplyvl kfstggsnra aiwldtgiha
      181 rewitqatgv wtankiakey gqdpsvtail esmdifleiv tnpdgfafth ssnrlwrktr
      241 svnagslcvg vdpnrnwdag fggagsssnp csetyhgpha hserevraiv dfirahgnvk
      301 svisihsysq mllfpygyrr aptpdhqemn elakkavsdl aavfgtkyty gsiantiyma
      361 ggttidwayd ngvkysftle lrdsgrygfl lpssqivpta tetwpalldi mvhvlehpy
//
LOCUS       XP_041326115             418 aa            linear   VRT 06-MAY-2021
DEFINITION  carboxypeptidase A2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326115
VERSION     XP_041326115.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470181.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..418
                     /product="carboxypeptidase A2-like"
                     /calculated_mol_wt=46644
     Region          26..100
                     /region_name="Propep_M14"
                     /note="Carboxypeptidase activation peptide; pfam02244"
                     /db_xref="CDD:460505"
     Region          117..415
                     /region_name="M14_CPA"
                     /note="Peptidase M14 carboxypeptidase subfamily A/B-like;
                     Carboxypeptidase A subgroup; cd03870"
                     /db_xref="CDD:349442"
     Site            order(178,181,236,253..254,305,357,359,379)
                     /site_type="active"
                     /db_xref="CDD:349442"
     Site            order(180..181,236,272,305..307,348,353,355..358,379,388)
                     /site_type="active"
                     /note="inhibitor binding interface [active]"
                     /db_xref="CDD:349442"
     CDS             1..418
                     /gene="LOC121355034"
                     /coded_by="XM_041470181.1:115..1371"
                     /db_xref="GeneID:121355034"
ORIGIN      
        1 mklilifsal lgaslcletf vghqvlrikt kneeevkqlq lleslehlel dfwvnpsapa
       61 lpvdvripav rvqsvkafle sqgieysili edlqdvldke kqdmaesaqr qrssntfdfg
      121 ayhtldeina eldslaseys fvekiqigqs yekrplyvlk fstggsnrpa iwldagihsr
      181 ewvtqasalw iankiasdyg tdesitslld kmdlfllpva npdgfvytht snrmwrktrs
      241 kipgsicvgv dpnrnwdagf ggpgassrpc sdsyhgpsan sevevksvvd fiknhgnfka
      301 fltlhsysql lmypygykct rpddyaeles lgraaansir slygttfqvg ticntiyqas
      361 ggsidwsydn gikysfafel rdtgrygfll panqilpaak etwlglkkim ehvrnkss
//
LOCUS       XP_041326118             420 aa            linear   VRT 06-MAY-2021
DEFINITION  carboxypeptidase A1-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326118
VERSION     XP_041326118.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470184.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="carboxypeptidase A1-like isoform X1"
                     /calculated_mol_wt=47072
     Region          26..100
                     /region_name="Propep_M14"
                     /note="Carboxypeptidase activation peptide; pfam02244"
                     /db_xref="CDD:460505"
     Region          118..418
                     /region_name="M14_CPA"
                     /note="Peptidase M14 carboxypeptidase subfamily A/B-like;
                     Carboxypeptidase A subgroup; cd03870"
                     /db_xref="CDD:349442"
     Site            order(180,183,238,255..256,307,359,361,381)
                     /site_type="active"
                     /db_xref="CDD:349442"
     Site            order(182..183,238,274,307..309,350,355,357..360,381,390)
                     /site_type="active"
                     /note="inhibitor binding interface [active]"
                     /db_xref="CDD:349442"
     CDS             1..420
                     /gene="LOC121355036"
                     /coded_by="XM_041470184.1:1..1263"
                     /db_xref="GeneID:121355036"
ORIGIN      
        1 mrlpvllaal vavatctetf fghqvlrivp qsdeelqkvq elqdlehlql dfwlaprrlg
       61 lpvdirvpfr slqavkahle asgvsysimi edvqallaee qmemlrssrq rsvdtstfny
      121 eayhtideiy nfmdmlvaen pnlvskleig rstenrplyv lkfstggtnr paiwidtgih
      181 srewvtqasg vwfaqkivqd hannegvasi letmdiflei vtnpdgfayt hstnrmwrkt
      241 rskhagaicv gvdpnrnwda gfgdagasgn scsetyhgpy pnsepevksi vdfvkshgni
      301 kafvsihsys qlllypygyt atpapddkel heisakavaa lsslygtsye ygsiittiyr
      361 asgstvdwty nqgikysftf elrdtgrygf llpakqivpt aeetwlalkv imehardhpy
//
LOCUS       XP_041326119             420 aa            linear   VRT 06-MAY-2021
DEFINITION  carboxypeptidase A1-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326119
VERSION     XP_041326119.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470185.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="carboxypeptidase A1-like isoform X2"
                     /calculated_mol_wt=47117
     Region          26..100
                     /region_name="Propep_M14"
                     /note="Carboxypeptidase activation peptide; pfam02244"
                     /db_xref="CDD:460505"
     Region          118..418
                     /region_name="M14_CPA"
                     /note="Peptidase M14 carboxypeptidase subfamily A/B-like;
                     Carboxypeptidase A subgroup; cd03870"
                     /db_xref="CDD:349442"
     Site            order(180,183,238,255..256,307,359,361,381)
                     /site_type="active"
                     /db_xref="CDD:349442"
     Site            order(182..183,238,274,307..309,350,355,357..360,381,390)
                     /site_type="active"
                     /note="inhibitor binding interface [active]"
                     /db_xref="CDD:349442"
     CDS             1..420
                     /gene="LOC121355036"
                     /coded_by="XM_041470185.1:1..1263"
                     /db_xref="GeneID:121355036"
ORIGIN      
        1 mrlpvllaal vavatctetf fghqvlrivp qsdeelqkvq elqdlehlql dfwlaprrlg
       61 lpvdirvpfr slqavkahle asgvsysimi edvqallaee qmemlrssrq rsvdtstfny
      121 eayhtideiy nfmdmlvaen pnlvskleig rstenrplyv lkfstggtnr paiwidtgih
      181 srewvtqasg vwfaqkivqd hannegvasi letmdiflei vtnpdgfayt hstnrmwrkt
      241 rskhagaicv gvdpnrnwda gfggqsssgn scsetyhgpy pnsepevksi vdfvkshgni
      301 kafvsihsys qlllypygyt atpapddkel heisakavaa lsslygtsye ygsiittiyr
      361 asgstvdwty nqgikysftf elrdtgrygf llpakqivpt aeetwlalkv imehardhpy
//
LOCUS       XP_041326120             401 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041326120
VERSION     XP_041326120.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470186.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..401
                     /product="kelch domain-containing protein 10"
                     /calculated_mol_wt=44197
     Region          48..344
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          51..109
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          113..163
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          167..215
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          219..272
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          275..321
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..401
                     /gene="KLHDC10"
                     /coded_by="XM_041470186.1:19..1224"
                     /db_xref="GeneID:121355037"
ORIGIN      
        1 msaaaaardg lgegaggaag ggdgsgggil nrfvqlpgrp raaghrcppa rsghrcvads
       61 snlyvfggyn pdydesggpe nedyplfrel wrynfatdtw hqmgtegymp relasmslvl
      121 hgnnllvfgg tgipfgesng ndvhvcnvky krwallscrg kkpnriygqa maiingclyv
      181 fggttgyiys tdlhkldlnt rewiqlkpnn mscdmpeery rheiahdgqr iyilgggtsw
      241 taysldkiha ynletntwee ittkphekvg fpaarrchsc vqikndvfvc ggyngevilg
      301 dvwklnlqtf qwvklpaamp epvyfhcaav tpagcmyvhg gvvnihenkr tgslfkmwlv
      361 vpsllelcwe kllasfphla tlsrsqllhl gltqglverl k
//
LOCUS       XP_041326121             502 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear respiratory factor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326121
VERSION     XP_041326121.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470187.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="nuclear respiratory factor 1"
                     /calculated_mol_wt=53262
     Region          87..283
                     /region_name="Nrf1_DNA-bind"
                     /note="NLS-binding and DNA-binding and dimerization
                     domains of Nrf1; pfam10491"
                     /db_xref="CDD:463112"
     CDS             1..502
                     /gene="NRF1"
                     /coded_by="XM_041470187.1:499..2007"
                     /db_xref="GeneID:121355038"
ORIGIN      
        1 meehgvtqae hmatieahav aqqvqqvhva tytehsmlsa dedspssped tsyddsdiln
       61 staadevtah laaagpvgma aaaavatgkk rkrphvfesn psirkrqqtr llrklratld
      121 eyttrvgqqa ivlcispskp npvfkvfgaa plenvvrkyk stiledlesa laehapapqe
      181 vnselpplti dgipvsvdkm tqaqlrafip emlkystgrg kpgwgkesck piwwpedipw
      241 anvrsdvrte eqkqrvswtq alrtivkncy kqhgredlly afedqqtpqt ttthsiahlv
      301 psqtvvqtfs npdgtvsliq vgtgatvatl adaselpttv tvaqvnysav adgeveqnwa
      361 tlqggemtiq ttqaseatqa vaslaeaava asqemqqgat vtmalnseaa ahavatlaea
      421 tlqgggqivl sgetaaavga ltgvqdangl vqipvsmyqt vvtslaqgng pvqvamapvt
      481 triadtavtm dgqavevvtl dq
//
LOCUS       XP_041326122             502 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear respiratory factor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326122
VERSION     XP_041326122.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470188.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..502
                     /product="nuclear respiratory factor 1"
                     /calculated_mol_wt=53262
     Region          87..283
                     /region_name="Nrf1_DNA-bind"
                     /note="NLS-binding and DNA-binding and dimerization
                     domains of Nrf1; pfam10491"
                     /db_xref="CDD:463112"
     CDS             1..502
                     /gene="NRF1"
                     /coded_by="XM_041470188.1:669..2177"
                     /db_xref="GeneID:121355038"
ORIGIN      
        1 meehgvtqae hmatieahav aqqvqqvhva tytehsmlsa dedspssped tsyddsdiln
       61 staadevtah laaagpvgma aaaavatgkk rkrphvfesn psirkrqqtr llrklratld
      121 eyttrvgqqa ivlcispskp npvfkvfgaa plenvvrkyk stiledlesa laehapapqe
      181 vnselpplti dgipvsvdkm tqaqlrafip emlkystgrg kpgwgkesck piwwpedipw
      241 anvrsdvrte eqkqrvswtq alrtivkncy kqhgredlly afedqqtpqt ttthsiahlv
      301 psqtvvqtfs npdgtvsliq vgtgatvatl adaselpttv tvaqvnysav adgeveqnwa
      361 tlqggemtiq ttqaseatqa vaslaeaava asqemqqgat vtmalnseaa ahavatlaea
      421 tlqgggqivl sgetaaavga ltgvqdangl vqipvsmyqt vvtslaqgng pvqvamapvt
      481 triadtavtm dgqavevvtl dq
//
LOCUS       XP_041326123             741 aa            linear   VRT 06-MAY-2021
DEFINITION  putative cation exchanger C521.04c [Pyrgilauda ruficollis].
ACCESSION   XP_041326123
VERSION     XP_041326123.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470189.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="putative cation exchanger C521.04c"
                     /calculated_mol_wt=81296
     Region          151..201
                     /region_name="YccF"
                     /note="Inner membrane component domain; pfam03733"
                     /db_xref="CDD:461030"
     Region          361..734
                     /region_name="ChaA"
                     /note="Cation (Ca2+/Na+/K+)/H+ antiporter ChaA [Inorganic
                     ion transport and metabolism]; COG0387"
                     /db_xref="CDD:440156"
     CDS             1..741
                     /gene="LOC121355039"
                     /coded_by="XM_041470189.1:34..2259"
                     /db_xref="GeneID:121355039"
ORIGIN      
        1 matdgepgrr rrccaqdtpd apkvpdsrgd sdgsrrgsly drhcaainna qgdlgdlgch
       61 lhrprvppat stpsccqqhs eevcescvvk ttltaenave anklsnnykf gfkkwkshvt
      121 arpwedrsei vkelysdlni irgsggstlt cgnvlylllf gwwlsllyvl vaavmfitim
      181 gapygrlcwd lagyflwpfg kviqkvevpk shqaceagvg essallggpt alrwrprcwv
      241 gtgywhrast avwlclgypl lalahglvcv tawllivlip vaklsaraas rvlllpperv
      301 lirclrmtev plegevilcc yraanpyyyk yavdginvfa vnllplvlvt lvlgyvdspn
      361 hltgsavkft lallsimpls yyigmaiasi saqsnfavga vvnatfgsit eltfyitali
      421 kgsregnrcy aevvksaltg tlvgcvlfvp glcmviggir hqeqrfnsrs agvssallfl
      481 svggvfaptl fskvygklvc gechnvtqnp lghylchnch fdlmdnngtl yyshvqplvy
      541 tvsillpaay liglfftlkt hthiydihis dchmpghhhs avvhwsrwra lvilllstlc
      601 msacadlate hispiltnst isqyfigvtv lamvpelpei vngiqfalqn nlslsieign
      661 ciavqvcmlq ipilvlftif yptnftlvfs dlhvyasmfs vvlmnyifmd gkcdyfqgtv
      721 lvmvyfilla vyffapspsg c
//
LOCUS       XP_041326124             560 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 209 [Pyrgilauda ruficollis].
ACCESSION   XP_041326124
VERSION     XP_041326124.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470190.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..560
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..560
                     /product="transmembrane protein 209"
                     /calculated_mol_wt=62486
     Region          10..559
                     /region_name="CytochromB561_N"
                     /note="Cytochrome B561, N terminal; cl46356"
                     /db_xref="CDD:480696"
     CDS             1..560
                     /gene="TMEM209"
                     /coded_by="XM_041470190.1:103..1785"
                     /db_xref="GeneID:121355040"
ORIGIN      
        1 mtpnkspdts lidlavkmrk qaetrkvvla wgllnisvag miytemtgkl lstyynitcf
       61 plwyiefala alfslnalfd fwryftytaa paslvtspsq qimgwlrraa vqitpprepa
      121 akrvlsltps ppiqgqcvls yspsrspsas pkfsggclsg yspqlqalag tspshstsvt
      181 yspgssytkv ssfshspngs pysmsvgagd sggirshyrf spilynnsty kddcitdvks
      241 ldtflrneee kqhrvqlgss dssspssspt fwnysrsmad haqilrkfqy qlacrsqaps
      301 ahkdeadlts kqaaeevwar vtmnrqlldh mdswtakfrn windtilvpl veemesvstq
      361 lrrmgcpelq igeasisslk qaalvkapli ptlnalvqyl dltpnqeylv erirelsqgg
      421 cmssfrwngg gdfkgrkwdt dlptdssilm hvfctyldsr lpphpkypdg ktftsqhfiq
      481 tpdkpdtsne nvfciyqssi npphyeliye chvyslpkgr nnmfhtllmf lyiiktkesg
      541 mlgrvnlgls gvnvlwifge
//
LOCUS       XP_041326126              68 aa            linear   VRT 06-MAY-2021
DEFINITION  small lysine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326126
VERSION     XP_041326126.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470192.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..68
                     /product="small lysine-rich protein 1"
                     /calculated_mol_wt=7465
     CDS             1..68
                     /gene="SMKR1"
                     /coded_by="XM_041470192.1:142..348"
                     /db_xref="GeneID:121355041"
ORIGIN      
        1 markakkpkg gkkksskkgv qkpvyhvdlf spaamlnayy ishnaaafle frghpwpgsl
       61 kkkgkkkk
//
LOCUS       XP_041326127              68 aa            linear   VRT 06-MAY-2021
DEFINITION  small lysine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326127
VERSION     XP_041326127.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470193.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..68
                     /product="small lysine-rich protein 1"
                     /calculated_mol_wt=7465
     CDS             1..68
                     /gene="SMKR1"
                     /coded_by="XM_041470193.1:137..343"
                     /db_xref="GeneID:121355041"
ORIGIN      
        1 markakkpkg gkkksskkgv qkpvyhvdlf spaamlnayy ishnaaafle frghpwpgsl
       61 kkkgkkkk
//
LOCUS       XP_041326128              68 aa            linear   VRT 06-MAY-2021
DEFINITION  small lysine-rich protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326128
VERSION     XP_041326128.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470194.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..68
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..68
                     /product="small lysine-rich protein 1"
                     /calculated_mol_wt=7465
     CDS             1..68
                     /gene="SMKR1"
                     /coded_by="XM_041470194.1:304..510"
                     /db_xref="GeneID:121355041"
ORIGIN      
        1 markakkpkg gkkksskkgv qkpvyhvdlf spaamlnayy ishnaaafle frghpwpgsl
       61 kkkgkkkk
//
LOCUS       XP_041326129             518 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: arylsulfatase A [Pyrgilauda ruficollis].
ACCESSION   XP_041326129
VERSION     XP_041326129.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470195.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..518
                     /product="LOW QUALITY PROTEIN: arylsulfatase A"
                     /calculated_mol_wt=55520
     Region          30..516
                     /region_name="ALP_like"
                     /note="alkaline phosphatases and sulfatases; cl23718"
                     /db_xref="CDD:474031"
     Site            order(38,78,238,290..291)
                     /site_type="active"
                     /db_xref="CDD:293732"
     Site            order(38,78,238,291)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293732"
     CDS             1..518
                     /gene="ARSA"
                     /coded_by="XM_041470195.1:86..1642"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121355042"
ORIGIN      
        1 mgprgrhlsw lpvvallvlp ppvraaaarp nfvlvladdl gfgdlgsygh pssatphldr
       61 laarglrftd fyssaavcsp sraalltgrl pvrsgifpgv fepgsrgglp laeltvaell
      121 kergyatamv gkwhlgygen gsflpgrqgf dhflgipysh dqgpcqnltc fppdtkcfgt
      181 cdqgvvavpl lwnqsivqqp vsfpelvply grfcrefiar carlrlpfll yyashhthyp
      241 qfasrqfagr trrgpfgdal aefddsvgql lqalrdngld nstlvfvtsd ngxaagtagt
      301 agtagtagta gtarvwqrqv sprvllwrgh glrvppcrag vthelastld ilptlaalag
      361 aalprvaldg fdlsplllgt gksprravff fppapdplrg pfavrlgkyk ahyftqgsfh
      421 sdttpdqach gltpltphlp pllfdleadp aenydllrgq pgpealqalk diavqkvlle
      481 qrlhfgdsqm rkgrdpslqp ccspgcspkp sccrcspq
//
LOCUS       XP_041326130             493 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear-interacting partner of ALK isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326130
VERSION     XP_041326130.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470196.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="nuclear-interacting partner of ALK isoform X1"
                     /calculated_mol_wt=53815
     Region          71..198
                     /region_name="zf-C3HC"
                     /note="C3HC zinc finger-like; pfam07967"
                     /db_xref="CDD:429759"
     Region          247..331
                     /region_name="Rsm1"
                     /note="Rsm1-like; pfam08600"
                     /db_xref="CDD:369989"
     CDS             1..493
                     /gene="ZC3HC1"
                     /coded_by="XM_041470196.1:247..1728"
                     /db_xref="GeneID:121355043"
ORIGIN      
        1 maapsaggaa aaaaggnrgr pppvtprqir dlidggiate gpgpggkdts dcseqangps
       61 qmealslesa sreayfsrve tftplrwagk ppalsplvca rfgwvsvecd mlrcsscqay
      121 lcmslqlafd lssykercee lrkalstahe kfcfwpdspc pdrfarllvd eprvllqdfl
      181 drfqslcqle lqlpslkped lknmslteer itrllqlige elehkgtege kppgkfstei
      241 lqvqvpacil alcgwtcsaa sgsmnlsvit csrcmrkvgl wgfhqlesaa apeldscgss
      301 sttpaaperf ppvptsprrm ltrsqdpgse qqhekspspa marprgwdsp ssmdrgeldv
      361 sspalrsrpv trsmgqgdtm evpsspvrra krarlcssss sdtslrsffh pssqhrdwcp
      421 wvstgeaees ledaasqtek epgkakpgwe vvlkrllgiq kcdtvpetep vslseksckv
      481 frifrqwesm nss
//
LOCUS       XP_041326131             492 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear-interacting partner of ALK isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326131
VERSION     XP_041326131.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470197.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="nuclear-interacting partner of ALK isoform X2"
                     /calculated_mol_wt=53687
     Region          71..198
                     /region_name="zf-C3HC"
                     /note="C3HC zinc finger-like; pfam07967"
                     /db_xref="CDD:429759"
     Region          247..332
                     /region_name="Rsm1"
                     /note="Rsm1-like; pfam08600"
                     /db_xref="CDD:369989"
     CDS             1..492
                     /gene="ZC3HC1"
                     /coded_by="XM_041470197.1:247..1725"
                     /db_xref="GeneID:121355043"
ORIGIN      
        1 maapsaggaa aaaaggnrgr pppvtprqir dlidggiate gpgpggkdts dcseqangps
       61 qmealslesa sreayfsrve tftplrwagk ppalsplvca rfgwvsvecd mlrcsscqay
      121 lcmslqlafd lssykercee lrkalstahe kfcfwpdspc pdrfarllvd eprvllqdfl
      181 drfqslcqle lqlpslkped lknmslteer itrllqlige elehkgtege kppgkfstei
      241 lqvqvpacil alcgwtcsaa sgsmnlsvit csrcmrkvgl wgfhqlesaa apeldscgss
      301 sttpaaperf ppvptsprrm ltrsqdpgse qhekspspam arprgwdsps smdrgeldvs
      361 spalrsrpvt rsmgqgdtme vpsspvrrak rarlcsssss dtslrsffhp ssqhrdwcpw
      421 vstgeaeesl edaasqteke pgkakpgwev vlkrllgiqk cdtvpetepv slseksckvf
      481 rifrqwesmn ss
//
LOCUS       XP_041326132             492 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear-interacting partner of ALK isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326132
VERSION     XP_041326132.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470198.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="nuclear-interacting partner of ALK isoform X3"
                     /calculated_mol_wt=54263
     Region          70..197
                     /region_name="zf-C3HC"
                     /note="C3HC zinc finger-like; pfam07967"
                     /db_xref="CDD:429759"
     Region          246..330
                     /region_name="Rsm1"
                     /note="Rsm1-like; pfam08600"
                     /db_xref="CDD:369989"
     CDS             1..492
                     /gene="ZC3HC1"
                     /coded_by="XM_041470198.1:294..1772"
                     /db_xref="GeneID:121355043"
ORIGIN      
        1 mpavtgdafq aplefyllvv lsginsklgm gspgedpcqd krdggkdtsd cseqangpsq
       61 mealslesas reayfsrvet ftplrwagkp palsplvcar fgwvsvecdm lrcsscqayl
      121 cmslqlafdl ssykerceel rkalstahek fcfwpdspcp drfarllvde prvllqdfld
      181 rfqslcqlel qlpslkpedl knmslteeri trllqligee lehkgtegek ppgkfsteil
      241 qvqvpacila lcgwtcsaas gsmnlsvitc srcmrkvglw gfhqlesaaa peldscgsss
      301 ttpaaperfp pvptsprrml trsqdpgseq qhekspspam arprgwdsps smdrgeldvs
      361 spalrsrpvt rsmgqgdtme vpsspvrrak rarlcsssss dtslrsffhp ssqhrdwcpw
      421 vstgeaeesl edaasqteke pgkakpgwev vlkrllgiqk cdtvpetepv slseksckvf
      481 rifrqwesmn ss
//
LOCUS       XP_041326134             688 aa            linear   VRT 06-MAY-2021
DEFINITION  smoothened homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041326134
VERSION     XP_041326134.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470200.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="smoothened homolog"
                     /calculated_mol_wt=76455
     Region          <1..66
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Region          90..420
                     /region_name="7tmF_SMO_homolog"
                     /note="class F smoothened family membrane region, a
                     homolog of frizzled receptors; cd15030"
                     /db_xref="CDD:320158"
     Site            order(91,100,151,171,254,256..257,259,261,264,270,347,
                     350..351,354,383,388,391..392)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:320158"
     Region          99..124
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320158"
     Region          134..155
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320158"
     Region          185..211
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320158"
     Region          229..245
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320158"
     Region          267..296
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320158"
     Region          318..345
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320158"
     Region          381..406
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320158"
     CDS             1..688
                     /gene="SMO"
                     /coded_by="XM_041470200.1:55..2121"
                     /db_xref="GeneID:121355045"
ORIGIN      
        1 mpkcedgqve lpsqtlcqat rapctivere rgwpdflkct tdrfpegcpn evqnikfnss
       61 gqceaplvrt dnpkswyedv egcgiqcqnp lftekehrem hvyiaafssv tifctfftla
      121 tfvadwrnsn rypavilfyv nacffvgsig wlaqfmdgar deivcradgt mrlgeptsne
      181 tlscviifvi vyyslmsgvi wfvmltyawh tsfkalgtty qpllgktsyf hlitwsipfv
      241 ltvailavaq vdgdsvsgic fvgyknyryr agfvlapigl vlivggyfli rgvmtlfsik
      301 snhpgllsek aaskinetml rlgifgflaf gfvfitfgch fydffnqaew ersfreyvlc
      361 eanvtiatqt nkpipdceik nrpsllveki nlfamfgtgv smstwvwtka tlliwkrtwc
      421 rltgqsddqp krikkskmia kafskrkell rdpgqelsfs mhtvshdgpv aglafninep
      481 sadvssawaq hvtkmvarrg ailpqdisvt pvatpvppee ranlwvvead vspelqkrsg
      541 rkkkrrkkkk evtpdpercp grravpsavp rlprlppqpc lvafvpdvlp avqpdatfpg
      601 gpwdgrranv lhvisnpfcp esgaadaesp gpgagrwhhn ggplwppqpg plprpgaart
      661 qgcraglapi hsrtnlvdae llepdsdf
//
LOCUS       XP_041326135             295 aa            linear   VRT 06-MAY-2021
DEFINITION  centrosomal protein of 41 kDa [Pyrgilauda ruficollis].
ACCESSION   XP_041326135
VERSION     XP_041326135.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470201.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..295
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..295
                     /product="centrosomal protein of 41 kDa"
                     /calculated_mol_wt=32530
     Region          164..247
                     /region_name="Rhodanese"
                     /note="Rhodanese-like domain; pfam00581"
                     /db_xref="CDD:425764"
     Site            220
                     /site_type="active"
                     /note="active site residue [active]"
                     /db_xref="CDD:238089"
     CDS             1..295
                     /gene="CEP41"
                     /coded_by="XM_041470201.1:56..943"
                     /db_xref="GeneID:121355046"
ORIGIN      
        1 msarggfgdp qlltrripsn pkyqhiktrl dtgnslskym ekleeikrny rykkdelfkr
       61 lkvttfaqlv lqvaslsnet levpneelhk lqdagaagdd aagtngkgsp egtaspvlfl
      121 nnpgageslr stlqsvisgv geldvekdsp keedsqaker pypdcpflll dvrdrdayeq
      181 chivgaysyp iatlsrtmnp ytnnileykn ahgkiiivyd nderlasqaa ttmcergfen
      241 lfmlsggrlt rgvsgrdskl ssvrsnpslp startvgsls srshsrtsiq nrpwk
//
LOCUS       XP_041326136             852 aa            linear   VRT 06-MAY-2021
DEFINITION  adenosylhomocysteinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326136
VERSION     XP_041326136.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470202.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..852
                     /product="adenosylhomocysteinase 3"
                     /calculated_mol_wt=90463
     Region          45..>361
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          439..851
                     /region_name="AdoHcyase"
                     /note="S-adenosyl-L-homocysteine hydrolase; smart00996"
                     /db_xref="CDD:214963"
     Site            order(448,451,455,458..459,582,585..586,602,604,608..609,
                     613,616..617,621,624..625,628..634,642,643..644,649..650,
                     653..657,659,674..676,678..681,684,697..701,711..713,724,
                     741..742,747,771,773,775..776,779,805,811..812,815..816,
                     819,822..823,825..827,829,832..833,836..837)
                     /site_type="other"
                     /note="homotetramer interface [polypeptide binding]"
                     /db_xref="CDD:240619"
     Site            order(486,488,490..491,551,576..577,606,610,767,772,777,
                     781)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:240619"
     Site            order(577..579,611,615,640,642,643..644,649,654,695..698,
                     701,719..721,764,766,772)
                     /site_type="other"
                     /note="NAD binding site [chemical binding]"
                     /db_xref="CDD:240619"
     CDS             1..852
                     /gene="AHCYL2"
                     /coded_by="XM_041470202.1:77..2635"
                     /db_xref="GeneID:121355047"
ORIGIN      
        1 msvqvavaap avelkelggp mdkaagppce pvgahaaghg vaapacpvpg aereaapaps
       61 aerppgggcp glsssaglss aaakvpqasa mkrsdphhpq hrhrdgsdss gaaaealvsp
      121 dgtvteaprt vkkvtgataa ggppggavrg ipagtapqpa rgsgtrrclg ragagpvrgp
      181 gargvlvtpr gcrgrgaapg lwlhfgdvfc rawgglsapc pphpvsmhrs grgaepeqsa
      241 amsvqvavaa pavelkelgg pmdkaagppc epvgahaagh gvaapacpvp gaereaapap
      301 saerppgggc pglsssagls saaakvpqas amkrsdphhp qhrhrdgsds sgaaaealvs
      361 pdgtvteapr tvkkiqfadq kqefnkrptk igrrslsrsi sqsstdsyss aasytdssdd
      421 etsprdkqqk nskgssdfcv knikqaefgr reieiaeqem palmalrkra qgekplagak
      481 ivgcthitaq tavrawpqtq tghslcpspl lppwpgfpvf awkgeseddf wwcidrcvnv
      541 egwqpnmild dggdlthwiy kkypnmfkki kgiveesvtg vhrlyqlska gklcvpamnv
      601 ndsvtkqkfd nlyccresil dglkrttdmm fggkqvvvcg ygevlhlqdp pnlrslpkte
      661 sflhffiike mpnmdgfrlv klnevirqvd ivitctgnkn vvtrehldrm knscivcnmg
      721 hsnteidvas lrtpeltwer vrsqvdhviw pdgkrivlla egrllnlscs tvptfvlsit
      781 attqalalie lynapegryk qdvyllpkkm deyvaslhlp tfdahltelt deqakylgln
      841 kngpfkpnyy ry
//
LOCUS       XP_041326137             408 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326137
VERSION     XP_041326137.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470203.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..408
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..408
                     /product="acrosin-like"
                     /calculated_mol_wt=44605
     Region          84..304
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(110,159,256)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(250,277,279)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..408
                     /gene="LOC121355048"
                     /coded_by="XM_041470203.1:1..1227"
                     /db_xref="GeneID:121355048"
ORIGIN      
        1 mareaprgsp tphtrceqgg lwgwglgrgt cglrplafdh ssvsanydps dgdyatlgss
       61 dvtslnvdst gvpsgtwpgi vsvqatleng twhmcsgali hpqwvltvaq cffrsgdtst
      121 wkvvvgatdl sqpgpeaqrr hirrvvkhrh ynkgperkni alleldqpve csdyiqlacv
      181 pdsslavtkl ktcyiagwra tpdsapsprl vlqeakvrli dvqlcnssrw yggavhpqdl
      241 cagyprggid tcqgdsgapl vckdntgdyf wlvglaswgk gcagdkrpgi ftstqhfhtw
      301 iemqmglvps vteapppepe pptliieeep pepepepepv sepepvpipv pipepepipe
      361 peedeeeeep eptpkpvkfi tisfpkaill rlftnlqefl eylrdkld
//
LOCUS       XP_041326138             341 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: acrosin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326138
VERSION     XP_041326138.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470204.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 28% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..341
                     /product="LOW QUALITY PROTEIN: acrosin-like"
                     /calculated_mol_wt=36404
     Region          63..269
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(216,244,246)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..341
                     /gene="LOC121355049"
                     /coded_by="XM_041470204.1:69..1094"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121355049"
ORIGIN      
        1 mallgllvll alagplgatw dtcrgtcglr pmafdhssvv aeysqnndye slessdgssq
       61 dtggsevhpg awpgvisvqa twengtwhmc sgalihpqwv ltvahcfara gdisrwevvi
      121 gatdlsqpgp eaqlrhirrl lvhqyydept awnnialvel dqpvecsdyi qlgcvpdssl
      181 avtklktcyi agwshpgqrs vparalgagt rraggsagar pgpglgsapr glpgatlsvv
      241 glaswgkgca gakrpgvfta tqhfhtwiqv qmgllppead apppepfpsp eeepeadled
      301 eenpnpedse dytkisfqqq ilgkflnlll ellqflkgek a
//
LOCUS       XP_041326139             343 aa            linear   VRT 06-MAY-2021
DEFINITION  tetraspanin-33 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326139
VERSION     XP_041326139.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470205.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="tetraspanin-33 isoform X1"
                     /calculated_mol_wt=36315
     Region          24..>159
                     /region_name="Tetraspanin"
                     /note="Tetraspanin family; pfam00335"
                     /db_xref="CDD:459767"
     CDS             1..343
                     /gene="TSPAN33"
                     /coded_by="XM_041470205.1:65..1096"
                     /db_xref="GeneID:121355050"
ORIGIN      
        1 makraavpag plgddfsfvs pvakyvlfff nllfwmismv mvavgvyarl lkhaeaamac
       61 lavdpaillv vvgvltflit fcgcvgslre nicllqmfsv cltiifllql aagvlgfvfs
      121 dkargkvsei ingaivhyrd dldlqnlidf gqkellrgcl lqglvpehvl qlhghqpqpr
      181 allrallllp arrrpgchqh hvwprdagqg lpggqclhph qrlhrqagql dpqqplpagg
      241 hhpgagpapa gghrpgaaph qpdprpdqaa alqpaapgrp lvlspqpprg taalpgapgp
      301 fpmpgsagta rgasledrec gsalaaeetp clwqpllgsa wrg
//
LOCUS       XP_041326140             286 aa            linear   VRT 06-MAY-2021
DEFINITION  tetraspanin-33 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326140
VERSION     XP_041326140.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470206.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..286
                     /product="tetraspanin-33 isoform X2"
                     /calculated_mol_wt=30067
     Region          <9..>102
                     /region_name="Tetraspanin"
                     /note="Tetraspanin family; pfam00335"
                     /db_xref="CDD:459767"
     CDS             1..286
                     /gene="TSPAN33"
                     /coded_by="XM_041470206.1:130..990"
                     /db_xref="GeneID:121355050"
ORIGIN      
        1 maclavdpai llvvvgvltf litfcgcvgs lrenicllqm fsvcltiifl lqlaagvlgf
       61 vfsdkargkv seiingaivh yrddldlqnl idfgqkellr gcllqglvpe hvlqlhghqp
      121 qprallrall llparrrpgc hqhhvwprda gqglpggqcl hphqrlhrqa gqldpqqplp
      181 agghhpgagp apagghrpga aphqpdprpd qaaalqpaap grplvlspqp prgtaalpga
      241 pgpfpmpgsa gtargasled recgsalaae etpclwqpll gsawrg
//
LOCUS       XP_041326142             284 aa            linear   VRT 06-MAY-2021
DEFINITION  tetraspanin-33 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326142
VERSION     XP_041326142.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470208.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="tetraspanin-33 isoform X3"
                     /calculated_mol_wt=31140
     Region          24..263
                     /region_name="Tetraspanin"
                     /note="Tetraspanin family; pfam00335"
                     /db_xref="CDD:459767"
     Region          117..237
                     /region_name="penumbra_like_LEL"
                     /note="Tetraspanin, extracellular domain or large
                     extracellular loop (LEL), penumbra_like family.
                     Tetraspanins are trans-membrane proteins with 4
                     trans-membrane segments. Both the N- and C-termini lie on
                     the intracellular side of the membrane. This alignment...;
                     cd03158"
                     /db_xref="CDD:239411"
     Site            order(118,123,127,129..130,133,147,150..151,154..155)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239411"
     CDS             1..284
                     /gene="TSPAN33"
                     /coded_by="XM_041470208.1:65..919"
                     /db_xref="GeneID:121355050"
ORIGIN      
        1 makraavpag plgddfsfvs pvakyvlfff nllfwmismv mvavgvyarl lkhaeaamac
       61 lavdpaillv vvgvltflit fcgcvgslre nicllqmfsv cltiifllql aagvlgfvfs
      121 dkargkvsei ingaivhyrd dldlqnlidf gqkefsccgg vsykdwsqnm yfnctatnps
      181 rercsvpfsc clhdadqavi ntmcghgmqa rgyleasafi htngcidklv nwthsnlfll
      241 ggitlglalp qlvgivlarl linqirdqik lqlynqqhra dpws
//
LOCUS       XP_041326143             269 aa            linear   VRT 06-MAY-2021
DEFINITION  tetraspanin-33 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326143
VERSION     XP_041326143.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470209.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523723.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="tetraspanin-33 isoform X4"
                     /calculated_mol_wt=28371
     Region          43..>81
                     /region_name="tetraspanin_LEL"
                     /note="Tetraspanin, extracellular domain or large
                     extracellular loop (LEL). Tetraspanins are trans-membrane
                     proteins with 4 trans-membrane segments. Both the N- and
                     C-termini lie on the intracellular side of the membrane.
                     This alignment model spans the...; cl02781"
                     /db_xref="CDD:351888"
     Site            order(44,49,53,55..56,59,73,76..77,80..81)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:239411"
     CDS             1..269
                     /gene="TSPAN33"
                     /coded_by="XM_041470209.1:65..874"
                     /db_xref="GeneID:121355050"
ORIGIN      
        1 makraavpag plgddfsfvs pvakyvlfff nllfwlaagv lgfvfsdkar gkvseiinga
       61 ivhyrddldl qnlidfgqke llrgcllqgl vpehvlqlhg hqpqprallr allllparrr
      121 pgchqhhvwp rdagqglpgg qclhphqrlh rqagqldpqq plpagghhpg agpapagghr
      181 pgaaphqpdp rpdqaaalqp aapgrplvls pqpprgtaal pgapgpfpmp gsagtargas
      241 ledrecgsal aaeetpclwq pllgsawrg
//
LOCUS       XP_041326144             616 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin alpha-11-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326144
VERSION     XP_041326144.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470210.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523725.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..616
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..616
                     /product="protocadherin alpha-11-like"
     Region          2..99
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(6..7,62,64,95,97..98)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          107..204
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(114..115,167,169,200,202..203)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          212..330
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(219..220,293,295,326,328..329)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          377..453
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          498..569
                     /region_name="Cadherin_C_2"
                     /note="Cadherin cytoplasmic C-terminal; pfam16492"
                     /db_xref="CDD:465139"
     CDS             1..616
                     /gene="LOC121355051"
                     /coded_by="XM_041470210.1:<1..1851"
                     /db_xref="GeneID:121355051"
ORIGIN      
        1 kvqlpenaer gtlvirlnat dldegtnsni syslqilspq drrdifridk nsgeirligd
       61 ldfedvslyr lqvdardkgt aplsghckvv levldvndna pevwvtslsv pvpedasvgt
      121 vvallsvsdr dsgengrvrc wvwpaspfgl eatfagsysl vlrealdrer vseyevevra
      181 edggapalra srglrvpvsd vndnapafaq avytvlaren naagaelarl wardpdeagn
      241 grvsysvweg gagvggaaag ssssssgggw rpassyvsvd aesgrlwalq pldyeelqvl
      301 qfevravdag qpplsgnatv qlfvldendn apallppags apeagavaae aaaaaagags
      361 asgtlwawaa wgapagqvva kiravdadsg ynawlryelw eprgkgpfrv glysgevsta
      421 raldeadgpr hrllivvrdh geparsatat lsvslleaae aalaaaagss ssssssslsr
      481 savgvelgpg aasaatnvwl vvaicavssl fllavvlyga srwapraavl sgpgpttlvc
      541 asevgswsys qrhsrslcva dgaaksdlmv fspnfppppp ppgpapkdtq pepsalldtv
      601 sgpscmpfsp pfhpps
//
LOCUS       XP_041326145             482 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 883-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326145
VERSION     XP_041326145.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470211.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523726.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..482
                     /product="zinc finger protein 883-like"
                     /calculated_mol_wt=55162
     Region          73..89
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          97..117
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          113..134
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          125..145
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          <128..393
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Site            order(130,132,134,136..137,140..141,144,158,160,164..165,
                     168..169,172,186,188,190,192..193,196..197,200)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          153..173
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          181..201
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          209..229
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(214,216,218,220..221,224..225,228,242,244,248..249,
                     252..253,256,270,272,274,276..277,280..281,284)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          237..257
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          265..285
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          293..313
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          321..341
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          349..369
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          377..397
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          405..425
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(410,412,414,416..417,420..421,424,438,440,444..445,
                     448..449,452,466,468,470,472..473,476..477,480)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          433..453
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          445..470
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          461..481
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..482
                     /gene="LOC121355052"
                     /coded_by="XM_041470211.1:50..1498"
                     /db_xref="GeneID:121355052"
ORIGIN      
        1 mprdaeaeqe lstesredks prqnlvaeav wsgstaqeps geekprrcrt rrgckrrwrg
       61 segeraslgr eggrrwsqss elglqeqlhd gekphtckec gksfscsssl slhmrthtge
      121 rpyecgecgk sfscssrlir hrrihtgekp yecgecgksf iqifhltrhq rihtgarpye
      181 cgecgksfrf scnltshqrt htgerpyqcg ecgksftdgs slishqrtht gkkpyecgec
      241 gkrfsvsshl ilhkrshtge kpyecgecgk rfsqsssliv hqrthtgerp yecgecgkrf
      301 qsssslllhq rthtgerpfe csvcgmsfgr ranlirhqgt htgerpyecs kcgkrfqsns
      361 illrhyqtht eerpfrcpdc gkgfrrnchl vrhrslhtge kpyecdqcrk rfqsssclll
      421 hyrihteekp fqcpdcgkgf rcnsslvihq rthtgerpyk cgecgksftc ssnlthhqrr
      481 hr
//
LOCUS       XP_041326146             141 aa            linear   VRT 06-MAY-2021
DEFINITION  B-cell receptor-associated protein 31-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326146
VERSION     XP_041326146.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470212.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523728.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..141
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>141
                     /product="B-cell receptor-associated protein 31-like"
     Region          <46..116
                     /region_name="Bap31"
                     /note="Bap31/Bap29 transmembrane region; pfam05529"
                     /db_xref="CDD:461673"
     CDS             1..141
                     /gene="LOC121355053"
                     /coded_by="XM_041470212.1:<1..>426"
                     /codon_start=3
                     /db_xref="GeneID:121355053"
ORIGIN      
        1 rgcpwcvrvd sgwvrahlgg fggtlvilgc lwggvppllt ppgppdalre trrynvgdke
       61 vlgtspaale hfhmklfraq rnlylagfal llsfllrrlv tlisaqaalg assqafrkqa
      121 egasqaarqy ledndalrkv q
//
LOCUS       XP_041326147            1715 aa            linear   VRT 06-MAY-2021
DEFINITION  tyrosine-protein phosphatase non-receptor type 23 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326147
VERSION     XP_041326147.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470213.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1715
                     /product="tyrosine-protein phosphatase non-receptor type
                     23"
                     /calculated_mol_wt=184747
     Region          2..357
                     /region_name="BRO1_HD-PTP_like"
                     /note="Protein-interacting, N-terminal, Bro1-like domain
                     of mammalian His-Domain type N23 protein tyrosine
                     phosphatase and related domains; cd09239"
                     /db_xref="CDD:185762"
     Site            order(125,128,141,144..145,189,192..193,202,205..206,336,
                     338,340,342)
                     /site_type="other"
                     /note="putative ESCRT-III binding site"
                     /db_xref="CDD:185762"
     Region          362..698
                     /region_name="V_HD-PTP_like"
                     /note="Protein-interacting V-domain of mammalian
                     His-Domain type N23 protein tyrosine phosphatase and
                     related domains; cd09234"
                     /db_xref="CDD:185747"
     Site            order(445,503,507,510..511,670,673..674,677,680)
                     /site_type="other"
                     /note="putative YPXnL-motif binding site"
                     /db_xref="CDD:185747"
     Region          <814..1218
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          1300..1503
                     /region_name="PTP-N23"
                     /note="PTP-like domain of tyrosine-protein phosphatase
                     non-receptor type 23; cd14539"
                     /db_xref="CDD:350387"
     CDS             1..1715
                     /gene="PTPN23"
                     /coded_by="XM_041470213.1:81..5228"
                     /db_xref="GeneID:121355054"
ORIGIN      
        1 meavprmpmi wldlkeagef afnaavkkfv lknygenpes yneelrklel lrqsavsvpr
       61 dfegcstlrk ylgqlhflqs ripmghgqea avpvtwteif sgkavthedi kyeqacvlyn
      121 lgalhsmlga mdkrmseegm kvscthfqca agaftylrdh fphsysvdms hqilslninl
      181 mlgqaqecll eksmldnrks flvarisaqv vdyykeacra lensetasll gkiqkdwkkl
      241 vqmkiyyfaa vahlhmgkqa eeqqkfgerv iyfqsaldkl neaiklakgq petvqealrf
      301 tmdviggkyn sakkdndfiy heavpaldtl qsvkgaplvk alpvnptdpa vtgpdifakl
      361 vpmaaheass lyseekakll rdvmakieak nevldqfmds mqldpetvdn ldmynhippv
      421 lmekcaalsv rpdtvrnlvq smqvlsgvft dveaslkeir dlleedeaqe rklqellgrv
      481 ppapasppgl aevskecsky lelhekasft ntelhramnl hlgnlrllgg pleqvraalp
      541 tptlseddkq vlqnlkrila kvqemrdqrm sleqqlremi qkddittslv ttdrsemkkl
      601 feeqlkkydq lkvyleqnla aqenvlkalt danvkyaavr kalaevehkw nttvqtlvas
      661 yeayedlmkk sqegkdfytd legkaaklle raraacqase ahrqqllere lkkqppprpt
      721 apkpplqkka ldeaggpeaa elgslalsel peelrslppe llpgplgqlp apalaalagg
      781 lrpaepymlp ggvasaplpp laptppfpgh yrlpgppavp gpfpapggvp gqllqpsapa
      841 pgpaapqlfp aaplirapaq pafgggphvp pprsspqhgp pavgaqpglg gheppgtrpa
      901 tttvdsvqap isscsvpprg pagpflppqr pgappapfpy paggvqpfga paqapfppaq
      961 pppafaqgpq qfppgpflpp graqaplpfq qpprvplapp aqfpqqqqrf sapgaqlppp
     1021 apaqaplppq lyqlpgqdql patglaphpg avpfprtpaq sgppalgglq pvpavspalp
     1081 fcpspappga qlppgtmalg ppapappsqa pspgplpgav vvqgplvpsp apspspalpm
     1141 qppaprpppa lpppgsaeap fprqspcpad llssspesqp ggsaapggll qptkagaqeg
     1201 qrpravqlie adpyaeperi rrllaelerf rglaerlerp apgggselda lwkelqeaqe
     1261 rdarqrsiai arcysmknrh qdimpydrnr vvlrsgkddy inasrvedls pycpaliatq
     1321 apllgtaadf wlmiyeqkvs vvvmlvseqe ldkkvlryfp sergqpvahg pltvvltslr
     1381 vtpthverml tlqyrdqslk rtvahlqfts wpelglpdsk gsllrfiqev hghylhqrpl
     1441 htpvvvhcss gvgrtgafcl lyaavqevea gngipdlaql vrrmrqqrkh mlqeklhlkf
     1501 cfeavllhae qvllrhgvgg pslakppnst spklyfqqdp qdlvlggdvp issiqatiak
     1561 lsikaggpga epgegwgadp gpapgpvepe vplaipdgvv dgvgapepep paprpplpea
     1621 pgdtessnhv ggespegpgg ppeppaappa ssssslella sltpeafsld aslkgkqrmn
     1681 kqnflqaqpg eglralrpsd dplsmldplw tlnka
//
LOCUS       XP_041326148            1175 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent RNA helicase DHX30 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326148
VERSION     XP_041326148.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470214.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1175
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1175
                     /product="ATP-dependent RNA helicase DHX30 isoform X1"
                     /calculated_mol_wt=131843
     Region          236..303
                     /region_name="dsrm"
                     /note="Double-stranded RNA binding motif; pfam00035"
                     /db_xref="CDD:425434"
     Region          421..>945
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1002..1089
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1175
                     /gene="DHX30"
                     /coded_by="XM_041470214.1:110..3637"
                     /db_xref="GeneID:121355055"
ORIGIN      
        1 mrgqgeepps cadsrdllke fpqpknllns vigralgish ardklvyiht ngprkkkvtl
       61 hikwpknvev egygtkkida erqaaaaacq lfkgwgllgp rnelfdaaky rlladqlgcp
      121 derwcsegkw rsksgpslad lstcwrrmep ddaiqpmeqg rmpkamrree leegeleege
      181 leegeleeea idvsdylpma hqdartpgrd asrggssiem tddntairal tqfplpknll
      241 aqviqiatss stvkeymqfr tvgtktkick ltlrwpcpmt faakgrrkve aenkaaalac
      301 qklkslglvd knnnplsham ynmtslrelg enqrkpchik vpeatlrkie nylnhypvdi
      361 resrpriadd mmnltkesga isdaitgkty ipmleaeevr lsqnllalwk rrgaswqesh
      421 plpvdphkdt ilsaieqnpv vviagdtgcg kttripqlll ehyilegrga rcnvvitqpr
      481 risaisvaqr vaqelgpnmr knvgyqvrle skpparggal lfctvgillr klqgnpsleg
      541 vshvvvdevh erdvntdfll illkgiqkln pdlrlvlmsa tgdnqrfshy fgdcpvvkvp
      601 gfmypvkeyy leeilaklgr hrhrhyeikq sddecvldld litdlvlqid ahgepggilc
      661 flpgwqeikg vqqrllemlg sqnsrylvlp vhsnipmmdq qnifqrpppg vrkivlatni
      721 aetsitindi vhvvdsgthk eerydlktkv scletvwvsk snvvqrrgra grcqsgfayh
      781 lfprsrldkm ptyqvpeilr tplenlvvqa kihmpektav eflskaldsp dikavdeavi
      841 llqeigvldq realttlgkr laqistdprl akaivlasiy rclhpllviv scltrdpfss
      901 slqnraevdk akavlsresg sdhlafvrav agweevlrrr dsrardnylq dyylygpslr
      961 finglvkqfs enlyeaflvs spsdctmpss vcnqyseeee lvkgvlmagl ypnliqvrqg
     1021 kvtrqgkfkp nsyayrtkag tvllhkstin reasklysrw ltyfmavksn ggvfvrdssq
     1081 vhplavllmt dtdihvrddg wratvsltds dllvlegdsy tirllrdfrv slskmvetcl
     1141 cyemaaipgd lhhqhsqlld ilvdllkgpp gsfgs
//
LOCUS       XP_041326149            1173 aa            linear   VRT 06-MAY-2021
DEFINITION  ATP-dependent RNA helicase DHX30 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326149
VERSION     XP_041326149.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470215.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1173
                     /product="ATP-dependent RNA helicase DHX30 isoform X2"
                     /calculated_mol_wt=131781
     Region          234..301
                     /region_name="dsrm"
                     /note="Double-stranded RNA binding motif; pfam00035"
                     /db_xref="CDD:425434"
     Region          419..>943
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          1000..1087
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1173
                     /gene="DHX30"
                     /coded_by="XM_041470215.1:66..3587"
                     /db_xref="GeneID:121355055"
ORIGIN      
        1 memfslnslk dsrdllkefp qpknllnsvi gralgishar dklvyihtng prkkkvtlhi
       61 kwpknveveg ygtkkidaer qaaaaacqlf kgwgllgprn elfdaakyrl ladqlgcpde
      121 rwcsegkwrs ksgpsladls tcwrrmepdd aiqpmeqgrm pkamrreele egeleegele
      181 egeleeeaid vsdylpmahq dartpgrdas rggssiemtd dntairaltq fplpknllaq
      241 viqiatssst vkeymqfrtv gtktkicklt lrwpcpmtfa akgrrkveae nkaaalacqk
      301 lkslglvdkn nnplshamyn mtslrelgen qrkpchikvp eatlrkieny lnhypvdire
      361 srpriaddmm nltkesgais daitgktyip mleaeevrls qnllalwkrr gaswqeshpl
      421 pvdphkdtil saieqnpvvv iagdtgcgkt tripqllleh yilegrgarc nvvitqprri
      481 saisvaqrva qelgpnmrkn vgyqvrlesk pparggallf ctvgillrkl qgnpslegvs
      541 hvvvdevher dvntdfllil lkgiqklnpd lrlvlmsatg dnqrfshyfg dcpvvkvpgf
      601 mypvkeyyle eilaklgrhr hrhyeikqsd decvldldli tdlvlqidah gepggilcfl
      661 pgwqeikgvq qrllemlgsq nsrylvlpvh snipmmdqqn ifqrpppgvr kivlatniae
      721 tsitindivh vvdsgthkee rydlktkvsc letvwvsksn vvqrrgragr cqsgfayhlf
      781 prsrldkmpt yqvpeilrtp lenlvvqaki hmpektavef lskaldspdi kavdeavill
      841 qeigvldqre alttlgkrla qistdprlak aivlasiyrc lhpllvivsc ltrdpfsssl
      901 qnraevdkak avlsresgsd hlafvravag weevlrrrds rardnylqdy ylygpslrfi
      961 nglvkqfsen lyeaflvssp sdctmpssvc nqyseeeelv kgvlmaglyp nliqvrqgkv
     1021 trqgkfkpns yayrtkagtv llhkstinre asklysrwlt yfmavksngg vfvrdssqvh
     1081 plavllmtdt dihvrddgwr atvsltdsdl lvlegdsyti rllrdfrvsl skmvetclcy
     1141 emaaipgdlh hqhsqlldil vdllkgppgs fgs
//
LOCUS       XP_041326151             981 aa            linear   VRT 06-MAY-2021
DEFINITION  SWI/SNF complex subunit SMARCC1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326151
VERSION     XP_041326151.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470217.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..981
                     /product="SWI/SNF complex subunit SMARCC1"
                     /calculated_mol_wt=109230
     Region          1..335
                     /region_name="SWIRM-assoc_2"
                     /note="SWIRM-associated domain at the N-terminal;
                     pfam16496"
                     /db_xref="CDD:465143"
     Region          297..>600
                     /region_name="RSC8"
                     /note="RSC chromatin remodeling complex subunit RSC8
                     [Chromatin structure and dynamics / Transcription];
                     COG5259"
                     /db_xref="CDD:227584"
     Region          596..662
                     /region_name="SWIRM-assoc_3"
                     /note="SWIRM-associated domain at the C-terminal;
                     pfam16498"
                     /db_xref="CDD:465145"
     Region          773..844
                     /region_name="SWIRM-assoc_1"
                     /note="SWIRM-associated region 1; pfam16495"
                     /db_xref="CDD:465142"
     CDS             1..981
                     /gene="SMARCC1"
                     /coded_by="XM_041470217.1:129..3074"
                     /db_xref="GeneID:121355056"
ORIGIN      
        1 mdfkaggtlc hilgaaykyk neqgwrrfdl qnpsrmdrnv emfmniektl vqnnclsrpt
       61 iylipdmelk lanklkdivk rhqgtvteek skathhvyps ptsvdddewl rpvmkkdkqv
      121 lvhwgffpds ydtwvhasei eaeiedapip ekpwkvhakw ildtdvfnew mneedyevde
      181 nrksvsfrqr ismkneepvr sperrdrkaa astrkrkhsp sppptpvesr kktgkkgqaa
      241 lygkrrgqke edeqedltkd medptpvpni eevvlpknvn pkkdsentpv kggtvadlde
      301 qdeetvatgg kededpnkgd qsrsldaged nvteqtnhii ipsyaswfdy ncihvierra
      361 lpeffngknk sktpeiylay rnfmidtyrl npqeyltsta crrnltgdvc avmrvhafle
      421 qwglinyqvd pesrpmamgp pptphfnvla dtpsglmplh irtpqvpaaq qmlsfpeknk
      481 ekptdlqnfg lrtdiyskkt lakskgasag rewteqetll llealemykd dwnkvsehvg
      541 srtqdecilh flrlpiedpy lensdaslgp layqpvpfsq sgnpvmstva flasvvdprv
      601 asaaakaale efsrvreevp lelveahvkk vqeaarasgk vdptygless ciagtgpeep
      661 dkmdgaeeek meteaegqpa ekveskaese peegekvpeg esersadkep esdgapeprt
      721 eekeaeenke nvdgskdkea eagkkkvehe isegnvataa aaalasaatk akhlaaveer
      781 kikslvallv etqmkkleik lrhfeeleti mdrekealeq qrqqllterq nfhmeqlkya
      841 elrarqqmeq qhsqtpqqph qhpsgpginp lgapahpgll phqqpppypm mhhqmppphp
      901 pqpgqlpgpg smlpgrmmpa gmhggsgpap pgmaplpgnl lgprvplaap ngmypgpaqp
      961 pppaegvtpp pagappasaa p
//
LOCUS       XP_041326152             505 aa            linear   VRT 06-MAY-2021
DEFINITION  FAST kinase domain-containing protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326152
VERSION     XP_041326152.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470218.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..505
                     /product="FAST kinase domain-containing protein 4"
                     /calculated_mol_wt=56363
     Region          4..208
                     /region_name="TBRG4-like_N"
                     /note="transforming growth factor beta (TGFbeta) regulator
                     4 (TBRG4) and similar proteins; predicted alpha-helical
                     domain N-terminal to FAST kinase-like protein, subdomain 1
                     (FAST_1); cd23739"
                     /db_xref="CDD:467932"
     Region          233..303
                     /region_name="FAST_1"
                     /note="FAST kinase-like protein, subdomain 1; pfam06743"
                     /db_xref="CDD:461999"
     Region          316..402
                     /region_name="FAST_2"
                     /note="FAST kinase-like protein, subdomain 2; pfam08368"
                     /db_xref="CDD:462448"
     Region          429..486
                     /region_name="RAP"
                     /note="This domain is found in various eukaryotic species,
                     particularly in apicomplexans; smart00952"
                     /db_xref="CDD:214932"
     CDS             1..505
                     /gene="TBRG4"
                     /coded_by="XM_041470218.1:16..1533"
                     /db_xref="GeneID:121355058"
ORIGIN      
        1 mspqmsqvwn tallqllrsl palglprggr qarsveqevl wrlrrlplrq lvqlaeqlag
       61 qglegpllpe vlrklelrwt eldgpravvt lmakvghlsp almerledka lelaeqfdpd
      121 elrrvalala lqqrrcvpll ralsyhllqk paelplpvlt dllfafskls fqqpqvlhrl
      181 alelqphvgs lspaqvlrca rsfaslrwls rplaeaiaqh cldntqslsl tqlcgvlvsf
      241 arlnfqpsss eeffsmiher lqgqeqqldv hlltdvvwsl cvlqqpraph llqvlcpefq
      301 arlrgdsspr aqsswlkllh inatarletp gyegpflppe llggrrdrdk dkdkatplqr
      361 glrealpgal ggddlvrynv stvygwdida eavldsdnkp lpvrdftaph lshsegtkpl
      421 ppgarrvavl rwelpqfssr grellgrgsl arrhlraagf llaevphyef lelklerqrv
      481 aylkdkvaka lasdtagdta gdtat
//
LOCUS       XP_041326153             451 aa            linear   VRT 06-MAY-2021
DEFINITION  cerebral cavernous malformations 2 protein [Pyrgilauda ruficollis].
ACCESSION   XP_041326153
VERSION     XP_041326153.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470219.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..451
                     /product="cerebral cavernous malformations 2 protein"
                     /calculated_mol_wt=49344
     Region          43..237
                     /region_name="PTB_CCM2"
                     /note="Cerebral cavernous malformation 2 FERM domain
                     C-lobe; cd13166"
                     /db_xref="CDD:269987"
     Site            order(57,91,93,111)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269987"
     Site            order(115,122..125)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269987"
     Site            order(291..295,299..300,302,305..306,308..309,312,325,328,
                     331..333,335..336)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:259825"
     Region          296..390
                     /region_name="CCM2_C"
                     /note="Cerebral cavernous malformation protein,
                     harmonin-homology; pfam16545"
                     /db_xref="CDD:435415"
     CDS             1..451
                     /gene="CCM2"
                     /coded_by="XM_041470219.1:228..1583"
                     /db_xref="GeneID:121355059"
ORIGIN      
        1 meeegkkgkk pgivspfkrv flkgekgrdk kaqekvterr plhtvvvalp drvepdlllh
       61 dyiekevkyl gqltsipgyl npssrteilh lidnakrahq lpgqltpehd avislsayni
      121 klvwrdgedl ilrvpihdia svsyirddsa hlvvlktaqd pgispsqslc aegskaltsg
      181 slsesaggpl eccclvvlat enkvgaeelc sllsqvfqiv ytestidfld raifdgastp
      241 trhlslhsdd sstkvdvkep feadastfsf adtleagdts pssfsarpsp hvttasesel
      301 sttatellqd ymmtlrtkls sqeiqqfaml lheyrngasi hefcinlkql ygdsrkflll
      361 glrpfipekd sqhfenflet igvkdgrgii tdsfgryrrs lgaasaangt gaagssdeqs
      421 vpseedewdr mishissdie algcsldrds s
//
LOCUS       XP_041326154             584 aa            linear   VRT 06-MAY-2021
DEFINITION  chondroitin sulfate proteoglycan 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326154
VERSION     XP_041326154.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470220.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..584
                     /product="chondroitin sulfate proteoglycan 5"
                     /calculated_mol_wt=59432
     Region          100..337
                     /region_name="Chon_Sulph_att"
                     /note="Chondroitin sulphate attachment domain; pfam06566"
                     /db_xref="CDD:368978"
     Region          493..583
                     /region_name="Neural_ProG_Cyt"
                     /note="Neural chondroitin sulphate proteoglycan
                     cytoplasmic domain; pfam06567"
                     /db_xref="CDD:461949"
     CDS             1..584
                     /gene="CSPG5"
                     /coded_by="XM_041470220.1:1..1755"
                     /db_xref="GeneID:121355060"
ORIGIN      
        1 mrppalpagc rggavpvpvp gaaaasavpp pppgpaxrsg rglrasawpp qnssvgegra
       61 wqgslesspp kwdlasgdpp gapsnstsag gaaagpqlep pgggtattep savpegcpgc
      121 agegeasavp pravtwpgdg gtvpvalgsp eepgsgdrpt pasppgpggf gglpaalpsp
      181 pgpqlatdsa esdlllaagg saaprtpvlg epgavpaagg dsggppelwa aasspapaqg
      241 argwtdltwl qepvtaatgp pkppadrtgs eiidvdyydl feggeglggf pgggrgaags
      301 arrrepegaa tpwalhelyd dftpfddadf ypttsfyadg ddedeledee eeeeeedggl
      361 edengyrppa saapxxpppp glaggsptaw prpgergppe ngsecrsgyv rhnsscrslc
      421 dlvpsychng gqcylveshg afcrcntqdy twhkgtrces ivtdfqvmcv avgsaalvvl
      481 llfmltvffa kklyllkten sklrktkyrt pselhndnfs lstiaegshp nddpsaahkl
      541 qdslksclkd eepfnihnst spkheggkge qdagelnclq nnlt
//
LOCUS       XP_041326155            1174 aa            linear   VRT 06-MAY-2021
DEFINITION  sterol regulatory element-binding protein cleavage-activating
            protein [Pyrgilauda ruficollis].
ACCESSION   XP_041326155
VERSION     XP_041326155.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470221.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1174
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1174
                     /product="sterol regulatory element-binding protein
                     cleavage-activating protein"
                     /calculated_mol_wt=128450
     Region          <11..>406
                     /region_name="2A060601"
                     /note="Niemann-Pick C type protein family; TIGR00917"
                     /db_xref="CDD:273337"
     Region          294..408
                     /region_name="Sterol-sensing"
                     /note="Sterol-sensing domain of SREBP cleavage-activation;
                     pfam12349"
                     /db_xref="CDD:463544"
     Region          <657..>699
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          906..940
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          973..>1130
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          978..1012
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1017..1052
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          1059..1092
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..1174
                     /gene="LOC121355061"
                     /coded_by="XM_041470221.1:69..3593"
                     /db_xref="GeneID:121355061"
ORIGIN      
        1 mtlterlrer israfyshgl lcasypipii lftalcilac cspllklplp gtgpvefstp
       61 lkdyappgeq gpqpgepger pdwyvgapva yiqqifvkat vspwqknfla vdvfrsplar
      121 vfqlveeirn halrdssgvr sleevclqvt dllpglrklr nllpehgcll lspgnfwqnd
      181 rerfnadpdi iktihqhepk tlqtsatlkd llfglpgrys gvslsnrrrv vsytvtlglq
      241 rydsrflssl rsrlkllhps pncslreesv vhvhfkeeig iaeliplvtt yiilfayiyf
      301 strreifpyl vvviglenvl vltksvvstp vdlevklria qglsneswsi mknmatelgi
      361 iligyftlvp aiqefclfav vglvsdfflq mfffttvlsi dirrmeagtv iwigilvytd
      421 paglrtylts qvteqsplgd aglpampvpg gvlpagdpki dlsvfpsepv qllenqtqpr
      481 eqkaglepeq hgwargpegr gqpelgttea qvtwgaedee iwrklsfrhw palfsyynit
      541 lakryisilp aipvtlylkp qealemrhpq earrsqpfvd tapqpepprg hqdvtlykva
      601 alglasgill vlllfclyrv lcpknygqng pgrrrrgdlp cddygysppe teivplvlrg
      661 hlmdieclas dgmllvsccl vgqirvwdaq tgdcltvipk prlrrdssgi fdyqegwdps
      721 pdgksgleds fesshqlkrl lgppqpplfc dqpdltslid tnflehakaa eseprlravg
      781 arhkdsgydf sslvgkvyee hgssgcrsms fpglpaphgp aglcggsgra pacgegeggc
      841 gddpcagcdk psapqswggd lessiwslel qgnlivagrs ngklevwdai egtlrssnde
      901 gqsgitalvf lnnrivaarl ngsldffsle thtslnhlqf rggpgrssvp pspelcrgaa
      961 lrcrvthsva cahhkpital raaagrlvtg sqdhtlrvfr ledscclftl qghsgaitav
     1021 yidqtmvlas ggqdgaiclw dvltgsrvsh mfahrgdvts ltcttscvis sglddvisiw
     1081 drssgiklys iqqelgcgas lgvisdnllv tggqgcvsfw digygdllqt vylgksnesq
     1141 parqilvlen aaivcnfgse lslvyvpsvl ekld
//
LOCUS       XP_041326156             266 aa            linear   VRT 06-MAY-2021
DEFINITION  elongator complex protein 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326156
VERSION     XP_041326156.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470222.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..266
                     /product="elongator complex protein 6"
                     /calculated_mol_wt=29100
     Region          2..251
                     /region_name="ELP6"
                     /note="Elongation complex protein 6; pfam09807"
                     /db_xref="CDD:462909"
     CDS             1..266
                     /gene="ELP6"
                     /coded_by="XM_041470222.1:40..840"
                     /db_xref="GeneID:121355062"
ORIGIN      
        1 mfaelnellg asperpdagk ftllrdtqtd gsflvhhfls fylragckvc fvallqsfsh
       61 ysivaqklgv slaaakergq lvfleglksc ldllfgekeq pgqpsplqfl sgsacelral
      121 fdfvrvslsa aggdswkgpv llvddlsvll slgaapvavl dfihycrvwv ccqlkgnivv
      181 lvhssedsed eenelvvnsl chhsdlilwa eglatgfckd vhgqikiikr lslrqaaeqd
      241 vvqiyqykiq drnvtffarg lsaavl
//
LOCUS       XP_041326158            2367 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 4 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326158
VERSION     XP_041326158.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470224.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2367
                     /product="microtubule-associated protein 4 isoform X1"
                     /calculated_mol_wt=245441
     Region          <1598..>1889
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <1851..2201
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          2212..2241
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2243..2272
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2274..2304
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     CDS             1..2367
                     /gene="MAP4"
                     /coded_by="XM_041470224.1:15..7118"
                     /db_xref="GeneID:121355064"
ORIGIN      
        1 mgaqqdmkgp dtsffveppv ppaateairt slpesptaaa apgnvpaaap alpgeaaate
       61 gpkaaapgaa svppadaafl paekagdtkp pqspaaaaas pfqatdggfs papeanpakg
      121 vndtstpgte lgfapaadag shhgvdlgfa paagveshqa tdlgfgpaag methqamdfg
      181 fspsagvesh qnidlgfapa agveshqnmd lgfapaagve shqtmdlgfa paadaephht
      241 ldlgfapaad nkaqhvmgse fssaaevnhh hgldsgfapa apakpvpavd ggnveaqpgp
      301 aaapslavsg elltseaalq qdkcpaeata kveaeskvpe icvdhseemk drkpppspre
      361 eeipgktqqp peaaaeakga lenkelpeks apaengetqk eeaehnhvqh aepqegktlq
      421 eptglptaqv rqapksrdrg fgrakpapvp ltdvpeehpv gvtqqkspep radpcstvel
      481 gcgagasprf raphkkatnv ptepvescrd ppqenwdleg amvkkkkkkp kqrrnqlprg
      541 mefwdengta srgarsapfg vewqkpavcp rtppgsrald vpqdakitag shileeqkaf
      601 pvpapgqqgp kpsvlhaspr eemepqgrrg dswmlgskgk skevpseqvg qtevqqsaaa
      661 kepskaterd fprknekred reskgaelkv nlskaetplq tnpselplsh knkepktpsp
      721 gqeapsdsvq qpslqtaakk nwerskgler eslkqphlea aavedklpae pkaageskrg
      781 seggvrspad apgapvpvpp eagevpagqd raqgvpkhps pgeaggrgva adpkqgkgvp
      841 gseqqagpdp glahgtdrpk kkrsegrgkr mkscseqvml sedggkssdg grtdeagkea
      901 vypengqgvp arghpsgsaa qacpadkpkk rgsdgrskkg ersffqqpfl enkmdsgsfp
      961 egadkvkegs dkgreqgcip agglqenaak mqrpielgpe kpkenvgkge tadlgaldqa
     1021 llleksreea ktpavaatis pteqvgwagk greaggagls sdvpvlaekp rkrssdgrrk
     1081 qpekspsgqa avlgaggear qeqvaggrke mslaeekgsg lqrerleeel gkpkiqggtg
     1141 sfseqpnlsg hktetsepei gkgnletkgt wpvnkgkead kspehragmh sptrelgmdk
     1201 pkgksrdgkg kkaehspelq pgdipavgrv qpaqseeske nsrtpevllg hlpdpakvqa
     1261 palplepgks htggeekprk gepdpqqpll lehkagagvl ppagleirdk peargaspcs
     1321 rnknpipehp avsdlslapv terskkrgyd gsskkaknas rqlvpleaka drreaqpavg
     1381 agpecgvedt dlvdenrnik nfptgpqrlg snkgsdfksm sqtpasgpgg ggdapcglpk
     1441 qgeggagtgg lppppppple avaeksnkep glgakkemqt lrsheqpkep gkevsqkgge
     1501 sreagsqggr pedkshlcpv akvddkeikp idtkhntaka pselphkaad pkhraasaaa
     1561 egtggpeatv scaetgtgrs papagtpgst gsistapagk drkaggaeqg rdmrneqssp
     1621 qqqgtepeaa gtaaqttqkq prenkkgpcq paekgpallk ddapragevl lkdalvskse
     1681 gdkpqektke kdsqaktkek esqdtnkere tqdtarekes qditkekesq evtkekesqd
     1741 ttkqkesqdt tkekktlevt keeefqdttk ekasqeiake kgsqdtakek esqdtakeke
     1801 sqdtakekes qdtakekepr apsketeeer eqkvvkeakk ervkaaeqpk gymrptkarg
     1861 vpalvpalaa ravprrpdra kaeepkaaea vsgnditapp nkelppspek kskpaassst
     1921 akaaaakakp sastspkrps satpgtnkkp tsptaapapg ttskrpgtss trpstltpke
     1981 tkpkvadakp aekrtslskp assttpktps rsssaaprtt apspvtaaaa akttaatppk
     2041 rptsiktdtk padakkppak spsadssrpk sapggatkss attpspaass vpgaapsrpk
     2101 pkatapkaat astvsadakk apakaagskg sagaaprapr pasaagpdlr hvrskigstd
     2161 nikhqpgggk gkvekrpesa aaapssepsa gtkvapkvaa kegvpkqpng kvqivskkan
     2221 yshvqskcgs kdnikhvpgg gnvqiqnkkv dlskvsskcg skanikhkpg ggdvkienqk
     2281 lnfkekaqak vgsldnvghs paggavkaeg gaepaqlppa ngagpgpgep pagpalreng
     2341 vgpglaalst adqremqsld thiqetn
//
LOCUS       XP_041326159            2367 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 4 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326159
VERSION     XP_041326159.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470225.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2367
                     /product="microtubule-associated protein 4 isoform X2"
                     /calculated_mol_wt=245456
     Region          <1598..>1889
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <1769..2096
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          <2147..2168
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2211..2240
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2242..2271
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2273..2303
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     CDS             1..2367
                     /gene="MAP4"
                     /coded_by="XM_041470225.1:15..7118"
                     /db_xref="GeneID:121355064"
ORIGIN      
        1 mgaqqdmkgp dtsffveppv ppaateairt slpesptaaa apgnvpaaap alpgeaaate
       61 gpkaaapgaa svppadaafl paekagdtkp pqspaaaaas pfqatdggfs papeanpakg
      121 vndtstpgte lgfapaadag shhgvdlgfa paagveshqa tdlgfgpaag methqamdfg
      181 fspsagvesh qnidlgfapa agveshqnmd lgfapaagve shqtmdlgfa paadaephht
      241 ldlgfapaad nkaqhvmgse fssaaevnhh hgldsgfapa apakpvpavd ggnveaqpgp
      301 aaapslavsg elltseaalq qdkcpaeata kveaeskvpe icvdhseemk drkpppspre
      361 eeipgktqqp peaaaeakga lenkelpeks apaengetqk eeaehnhvqh aepqegktlq
      421 eptglptaqv rqapksrdrg fgrakpapvp ltdvpeehpv gvtqqkspep radpcstvel
      481 gcgagasprf raphkkatnv ptepvescrd ppqenwdleg amvkkkkkkp kqrrnqlprg
      541 mefwdengta srgarsapfg vewqkpavcp rtppgsrald vpqdakitag shileeqkaf
      601 pvpapgqqgp kpsvlhaspr eemepqgrrg dswmlgskgk skevpseqvg qtevqqsaaa
      661 kepskaterd fprknekred reskgaelkv nlskaetplq tnpselplsh knkepktpsp
      721 gqeapsdsvq qpslqtaakk nwerskgler eslkqphlea aavedklpae pkaageskrg
      781 seggvrspad apgapvpvpp eagevpagqd raqgvpkhps pgeaggrgva adpkqgkgvp
      841 gseqqagpdp glahgtdrpk kkrsegrgkr mkscseqvml sedggkssdg grtdeagkea
      901 vypengqgvp arghpsgsaa qacpadkpkk rgsdgrskkg ersffqqpfl enkmdsgsfp
      961 egadkvkegs dkgreqgcip agglqenaak mqrpielgpe kpkenvgkge tadlgaldqa
     1021 llleksreea ktpavaatis pteqvgwagk greaggagls sdvpvlaekp rkrssdgrrk
     1081 qpekspsgqa avlgaggear qeqvaggrke mslaeekgsg lqrerleeel gkpkiqggtg
     1141 sfseqpnlsg hktetsepei gkgnletkgt wpvnkgkead kspehragmh sptrelgmdk
     1201 pkgksrdgkg kkaehspelq pgdipavgrv qpaqseeske nsrtpevllg hlpdpakvqa
     1261 palplepgks htggeekprk gepdpqqpll lehkagagvl ppagleirdk peargaspcs
     1321 rnknpipehp avsdlslapv terskkrgyd gsskkaknas rqlvpleaka drreaqpavg
     1381 agpecgvedt dlvdenrnik nfptgpqrlg snkgsdfksm sqtpasgpgg ggdapcglpk
     1441 qgeggagtgg lppppppple avaeksnkep glgakkemqt lrsheqpkep gkevsqkgge
     1501 sreagsqggr pedkshlcpv akvddkeikp idtkhntaka pselphkaad pkhraasaaa
     1561 egtggpeatv scaetgtgrs papagtpgst gsistapagk drkaggaeqg rdmrneqssp
     1621 qqqgtepeaa gtaaqttqkq prenkkgpcq paekgpallk ddapragevl lkdalvskse
     1681 gdkpqektke kdsqaktkek esqdtnkere tqdtarekes qditkekesq evtkekesqd
     1741 ttkqkesqdt tkekktlevt keeefqdttk ekasqeiake kgsqdtakek esqdtakeke
     1801 sqdtakekes qdtakekepr apsketeeer eqkvvkeakk ervkaaeqpk gymrptkarg
     1861 vpalvpalaa ravprrpdra kaeepkaaea vsgnditapp nkelppspek kskpaassst
     1921 akaaaakakp sastspkrps satpgtnkkp tsptaapapg ttskrpgtss trpstltpke
     1981 tkpkvadakp aekrtslskp assttpktps rsssaaprtt apspvtaaaa akttaatppk
     2041 rptsiktdtk padakkppak spsdssrpks apggatkssa ttpspaassv pgaapsrpkp
     2101 katapkaata stvsadakka pakaagskgs agaapraprp asaagpdlrh vrskigstdn
     2161 ikhqpgggkg kvekrpesaa aapssepsag tkvapkvaak egvpkqpngk vqivskkany
     2221 shvqskcgsk dnikhvpggg nvqiqnkkvd lskvsskcgs kanikhkpgg gdvkienqkl
     2281 nfkekaqakv gsldnvghsp aggavkaegg aepaqlppan gagpgpgepp agpalrengv
     2341 gpglaalsta dqremqsldt hiqetsi
//
LOCUS       XP_041326160            2353 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 4 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326160
VERSION     XP_041326160.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470226.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2353
                     /product="microtubule-associated protein 4 isoform X3"
                     /calculated_mol_wt=244191
     Region          <1583..>1874
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <1836..2186
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          2197..2226
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2228..2257
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2259..2289
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     CDS             1..2353
                     /gene="MAP4"
                     /coded_by="XM_041470226.1:15..7076"
                     /db_xref="GeneID:121355064"
ORIGIN      
        1 mgaqqdmkgp dtsffveppv ppaateairt slpesptaaa apgnvpaaap alpgeaaate
       61 gpkaaapeka gdtkppqspa aaaaspfqat dggfspapea npakgvndts tpgtelgfap
      121 aadagshhgv dlgfapaagv eshqatdlgf gpaagmethq amdfgfspsa gveshqnidl
      181 gfapaagves hqnmdlgfap aagveshqtm dlgfapaada ephhtldlgf apaadnkaqh
      241 vmgsefssaa evnhhhglds gfapaapakp vpavdggnve aqpgpaaaps lavsgellts
      301 eaalqqdkcp aeatakveae skvpeicvdh seemkdrkpp pspreeeipg ktqqppeaaa
      361 eakgalenke lpeksapaen getqkeeaeh nhvqhaepqe gktlqeptgl ptaqvrqapk
      421 srdrgfgrak papvpltdvp eehpvgvtqq kspepradpc stvelgcgag asprfraphk
      481 katnvptepv escrdppqen wdlegamvkk kkkkpkqrrn qlprgmefwd engtasrgar
      541 sapfgvewqk pavcprtppg sraldvpqda kitagshile eqkafpvpap gqqgpkpsvl
      601 haspreemep qgrrgdswml gskgkskevp seqvgqtevq qsaaakepsk aterdfprkn
      661 ekredreskg aelkvnlska etplqtnpse lplshknkep ktpspgqeap sdsvqqpslq
      721 taakknwers kglereslkq phleaaaved klpaepkaag eskrgseggv rspadapgap
      781 vpvppeagev pagqdraqgv pkhpspgeag grgvaadpkq gkgvpgseqq agpdpglahg
      841 tdrpkkkrse grgkrmkscs eqvmlsedgg kssdggrtde agkeavypen gqgvparghp
      901 sgsaaqacpa dkpkkrgsdg rskkgersff qqpflenkmd sgsfpegadk vkegsdkgre
      961 qgcipagglq enaakmqrpi elgpekpken vgkgetadlg aldqalllek sreeaktpav
     1021 aatispteqv gwagkgreag gaglssdvpv laekprkrss dgrrkqpeks psgqaavlga
     1081 ggearqeqva ggrkemslae ekgsglqrer leeelgkpki qggtgsfseq pnlsghktet
     1141 sepeigkgnl etkgtwpvnk gkeadkspeh ragmhsptre lgmdkpkgks rdgkgkkaeh
     1201 spelqpgdip avgrvqpaqs eeskensrtp evllghlpdp akvqapalpl epgkshtgge
     1261 ekprkgepdp qqplllehka gagvlppagl eirdkpearg aspcsrnknp ipehpavsdl
     1321 slapvtersk krgydgsskk aknasrqlvp leakadrrea qpavgagpec gvedtdlvde
     1381 nrniknfptg pqrlgsnkgs dfksmsqtpa sgpggggdap cglpkqgegg agtgglpppp
     1441 pppleavaek snkepglgak kemqtlrshe qpkepgkevs qkggesreag sqggrpedks
     1501 hlcpvakvdd keikpidtkh ntakapselp hkaadpkhra asaaaegtgg peatvscaet
     1561 gtgrspapag tpgstgsist apagkdrkag gaeqgrdmrn eqsspqqqgt epeaagtaaq
     1621 ttqkqprenk kgpcqpaekg pallkddapr agevllkdal vsksegdkpq ektkekdsqa
     1681 ktkekesqdt nkeretqdta rekesqditk ekesqevtke kesqdttkqk esqdttkekk
     1741 tlevtkeeef qdttkekasq eiakekgsqd takekesqdt akekesqdta kekesqdtak
     1801 ekeprapske teeereqkvv keakkervka aeqpkgymrp tkargvpalv palaaravpr
     1861 rpdrakaeep kaaeavsgnd itappnkelp pspekkskpa assstakaaa akakpsasts
     1921 pkrpssatpg tnkkptspta apapgttskr pgtsstrpst ltpketkpkv adakpaekrt
     1981 slskpasstt pktpsrsssa aprttapspv taaaaaktta atppkrptsi ktdtkpadak
     2041 kppakspsad ssrpksapgg atkssattps paassvpgaa psrpkpkata pkaatastvs
     2101 adakkapaka agskgsagaa praprpasaa gpdlrhvrsk igstdnikhq pgggkgkvek
     2161 rpesaaaaps sepsagtkva pkvaakegvp kqpngkvqiv skkanyshvq skcgskdnik
     2221 hvpgggnvqi qnkkvdlskv sskcgskani khkpgggdvk ienqklnfke kaqakvgsld
     2281 nvghspagga vkaeggaepa qlppangagp gpgeppagpa lrengvgpgl aalstadqre
     2341 mqsldthiqe tsi
//
LOCUS       XP_041326161            2327 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 4 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326161
VERSION     XP_041326161.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470227.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2327
                     /product="microtubule-associated protein 4 isoform X4"
                     /calculated_mol_wt=241490
     Region          <1598..>1889
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <1769..2085
                     /region_name="PTZ00449"
                     /note="104 kDa microneme/rhoptry antigen; Provisional"
                     /db_xref="CDD:185628"
     Region          <2148..2169
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2171..2200
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2202..2231
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2233..2263
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     CDS             1..2327
                     /gene="MAP4"
                     /coded_by="XM_041470227.1:15..6998"
                     /db_xref="GeneID:121355064"
ORIGIN      
        1 mgaqqdmkgp dtsffveppv ppaateairt slpesptaaa apgnvpaaap alpgeaaate
       61 gpkaaapgaa svppadaafl paekagdtkp pqspaaaaas pfqatdggfs papeanpakg
      121 vndtstpgte lgfapaadag shhgvdlgfa paagveshqa tdlgfgpaag methqamdfg
      181 fspsagvesh qnidlgfapa agveshqnmd lgfapaagve shqtmdlgfa paadaephht
      241 ldlgfapaad nkaqhvmgse fssaaevnhh hgldsgfapa apakpvpavd ggnveaqpgp
      301 aaapslavsg elltseaalq qdkcpaeata kveaeskvpe icvdhseemk drkpppspre
      361 eeipgktqqp peaaaeakga lenkelpeks apaengetqk eeaehnhvqh aepqegktlq
      421 eptglptaqv rqapksrdrg fgrakpapvp ltdvpeehpv gvtqqkspep radpcstvel
      481 gcgagasprf raphkkatnv ptepvescrd ppqenwdleg amvkkkkkkp kqrrnqlprg
      541 mefwdengta srgarsapfg vewqkpavcp rtppgsrald vpqdakitag shileeqkaf
      601 pvpapgqqgp kpsvlhaspr eemepqgrrg dswmlgskgk skevpseqvg qtevqqsaaa
      661 kepskaterd fprknekred reskgaelkv nlskaetplq tnpselplsh knkepktpsp
      721 gqeapsdsvq qpslqtaakk nwerskgler eslkqphlea aavedklpae pkaageskrg
      781 seggvrspad apgapvpvpp eagevpagqd raqgvpkhps pgeaggrgva adpkqgkgvp
      841 gseqqagpdp glahgtdrpk kkrsegrgkr mkscseqvml sedggkssdg grtdeagkea
      901 vypengqgvp arghpsgsaa qacpadkpkk rgsdgrskkg ersffqqpfl enkmdsgsfp
      961 egadkvkegs dkgreqgcip agglqenaak mqrpielgpe kpkenvgkge tadlgaldqa
     1021 llleksreea ktpavaatis pteqvgwagk greaggagls sdvpvlaekp rkrssdgrrk
     1081 qpekspsgqa avlgaggear qeqvaggrke mslaeekgsg lqrerleeel gkpkiqggtg
     1141 sfseqpnlsg hktetsepei gkgnletkgt wpvnkgkead kspehragmh sptrelgmdk
     1201 pkgksrdgkg kkaehspelq pgdipavgrv qpaqseeske nsrtpevllg hlpdpakvqa
     1261 palplepgks htggeekprk gepdpqqpll lehkagagvl ppagleirdk peargaspcs
     1321 rnknpipehp avsdlslapv terskkrgyd gsskkaknas rqlvpleaka drreaqpavg
     1381 agpecgvedt dlvdenrnik nfptgpqrlg snkgsdfksm sqtpasgpgg ggdapcglpk
     1441 qgeggagtgg lppppppple avaeksnkep glgakkemqt lrsheqpkep gkevsqkgge
     1501 sreagsqggr pedkshlcpv akvddkeikp idtkhntaka pselphkaad pkhraasaaa
     1561 egtggpeatv scaetgtgrs papagtpgst gsistapagk drkaggaeqg rdmrneqssp
     1621 qqqgtepeaa gtaaqttqkq prenkkgpcq paekgpallk ddapragevl lkdalvskse
     1681 gdkpqektke kdsqaktkek esqdtnkere tqdtarekes qditkekesq evtkekesqd
     1741 ttkqkesqdt tkekktlevt keeefqdttk ekasqeiake kgsqdtakek esqdtakeke
     1801 sqdtakekes qdtakekepr apsketeeer eqkvvkeakk ervkaaeqpk gymrptkarg
     1861 vpalvpalaa ravprrpdra kaeepkaaea vsgnditapp nkelppspek kskpaassst
     1921 akaaaakakp sastspkrps satpgtnkkp tsptaapapg ttskrpgtss trpstltpke
     1981 tkpkvadakp aekrtslskp assttpktps rsssaaprtt apspvtaaaa akttaatppk
     2041 rptsiktdtk padakkppak spsadssrpk sapggatkss attpspaass vpgaapsrpk
     2101 pkatapkaat astvsadakk apakaagskg sagaaprapr pasaagpdlr hvrskigstd
     2161 nikhqpgggk vqivskkany shvqskcgsk dnikhvpggg nvqiqnkkvd lskvsskcgs
     2221 kanikhkpgg gdvkienqkl nfkekaqakv gsldnvghsp aggavkaegg aepaqlppan
     2281 gagpgpgepp agpalrengv gpglaalsta dqremqsldt hiqetsi
//
LOCUS       XP_041326163            2311 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 4 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326163
VERSION     XP_041326163.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470229.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2311
                     /product="microtubule-associated protein 4 isoform X5"
                     /calculated_mol_wt=239137
     Region          <1460..1834
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <1813..2144
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          2155..2184
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2186..2215
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          2217..2247
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     CDS             1..2311
                     /gene="MAP4"
                     /coded_by="XM_041470229.1:15..6950"
                     /db_xref="GeneID:121355064"
ORIGIN      
        1 mgaqqdmkgp dtsffveppv ppaateairt slpesptaaa apgnvpaaap alpgeaaate
       61 gpkaaapgaa svppadaafl paekagdtkp pqspaaaaas pfqatdggfs papeanpakg
      121 vndtstpgte lgfapaadag shhgvdlgfa paagveshqa tdlgfgpaag methqamdfg
      181 fspsagvesh qnidlgfapa agveshqnmd lgfapaagve shqtmdlgfa paadaephht
      241 ldlgfapaad nkaqhvmgse fssaaevnhh hgldsgfapa apakpvpavd ggnveaqpgp
      301 aaapslavsg elltseaalq qdkcpaeata kveaeskvpe icvdhseemk drkpppspre
      361 eeipgktqqp peaaaeakga lenkelpeks apaengetqk eeaehnhvqh aepqegktlq
      421 eptglptaqv rqapksrdrg fgrakpapvp ltdvpeehpv gvtqqkspep radpcstvel
      481 gcgagasprf raphkkatnv ptepvescrd ppqenwdleg amvkkkkkkp kqrrnqlprg
      541 mefwdengta srgarsapfg vewqkpavcp rtppgsrald vpqdakitag shileeqkaf
      601 pvpapgqqgp kpsvlhaspr eemepqgrrg dswmlgskgk skevpseqvg qtevqqsaaa
      661 kepskaterd fprknekred reskgaelkv nlskaetplq tnpselplsh knkepktpsp
      721 gqeapsdsvq qpslqtaakk nwerskgler eslkqphlea aavedklpae pkaageskrg
      781 seggvrspad apgapvpvpp eagevpagqd raqgvpkhps pgeaggrgva adpkqgkgvp
      841 gseqqagpdp glahgtdrpk kkrsegrgkr mkscseqvml sedggkssdg grtdeagkea
      901 vypengqgvp arghpsgsaa qacpadkpkk rgsdgrskkg ersffqqpfl enkmdsgsfp
      961 egadkvkegs dkgreqgcip agglqenaak mqrpielgpe kpkenvgkge tadlgaldqa
     1021 llleksreea ktpavaatis pteqvgwagk greaggagls sdvpvlaekp rkrssdgrrk
     1081 qpekspsgqa avlgaggear qeqvaggrke mslaeekgsg lqrerleeel gkpkiqggtg
     1141 sfseqpnlsg hktetsepei gkgnletkgt wpvnkgkead kspehragmh sptrelgmdk
     1201 pkgksrdgkg kkaehspelq pgdipavgrv qpaqseeske nsrtpevllg hlpdpakvqa
     1261 palplepgks htggeekprk gepdpqqpll lehkagagvl ppagleirdk peargaspcs
     1321 rnknpipehp avsdlslapv terskkrgyd gsskkaknas rqlvpleaka drreaqpavg
     1381 agpecgvedt dlvdenrnik nfptgpqrlg snkgsdfksm sqtpasgpgg ggdapcglpk
     1441 qgeggagtgg lppppppple avaeksnkep glgakkemqt lrsheqpkep gkevsqkgge
     1501 sreagsqggr pedkshlcpv akvddkeikp idtkhntaka pselphkaad pkhraasaaa
     1561 egtggpeatv scaetgtgrs papagtpgst gsistapagk drkaggaeqg rdmrneqssp
     1621 qqqgtepeaa gtaaqttqkq prenkkgpcq paekgpallk ddapragevl lkdalvskse
     1681 gdkpqektke kdsqaktkek esqdtnkere tqdtarekes qditkekesq evtkekesqd
     1741 ttkqkesqdt tkekktlevt keeefqdttk ekasqeiake kgsqdtakek esqdtakeke
     1801 sqdtakekes qdtakekepr aptkaeepka aeavsgndit appnkelpps pekkskpaas
     1861 sstakaaaak akpsastspk rpssatpgtn kkptsptaap apgttskrpg tsstrpstlt
     1921 pketkpkvad akpaekrtsl skpassttpk tpsrsssaap rttapspvta aaaakttaat
     1981 ppkrptsikt dtkpadakkp pakspsadss rpksapggat kssattpspa assvpgaaps
     2041 rpkpkatapk aatastvsad akkapakaag skgsagaapr aprpasaagp dlrhvrskig
     2101 stdnikhqpg ggkgkvekrp esaaaapsse psagtkvapk vaakegvpkq pngkvqivsk
     2161 kanyshvqsk cgskdnikhv pgggnvqiqn kkvdlskvss kcgskanikh kpgggdvkie
     2221 nqklnfkeka qakvgsldnv ghspaggavk aeggaepaql ppangagpgp geppagpalr
     2281 engvgpglaa lstadqremq sldthiqets i
//
LOCUS       XP_041326164             912 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 4 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326164
VERSION     XP_041326164.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470230.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..912
                     /product="microtubule-associated protein 4 isoform X6"
                     /calculated_mol_wt=90798
     Region          <320..457
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <423..745
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          756..785
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          787..816
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          818..848
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     CDS             1..912
                     /gene="MAP4"
                     /coded_by="XM_041470230.1:15..2753"
                     /db_xref="GeneID:121355064"
ORIGIN      
        1 mgaqqdmkgp dtsffveppv ppaateairt slpesptaaa apgnvpaaap alpgeaaate
       61 gpkaaapgaa svppadaafl paekagdtkp pqspaaaaas pfqatdggfs papeanpakg
      121 vndtstpgte lgfapaadag shhgvdlgfa paagveshqa tdlgfgpaag methqamdfg
      181 fspsagvesh qnidlgfapa agveshqnmd lgfapaagve shqtmdlgfa paadaephht
      241 ldlgfapaad nkaqhvmgse fssaaevnhh hgldsgfapa apakpvpavd ggnveaqpgp
      301 aaapslavsg elltseaalq qdkcpaeata kveaeskvpe icvdhseemk drkpppspre
      361 eeipgktqqp peaaaeakga lenkelpeks apaengetqk eeaehnhvqh aepqegktlq
      421 eptakaeepk aaeavsgndi tappnkelpp spekkskpaa ssstakaaaa kakpsastsp
      481 krpssatpgt nkkptsptaa papgttskrp gtsstrpstl tpketkpkva dakpaekrts
      541 lskpassttp ktpsrsssaa prttapspvt aaaaakttaa tppkrptsik tdtkpadakk
      601 ppakspsads srpksapgga tkssattpsp aassvpgaap srpkpkatap kaatastvsa
      661 dakkapakaa gskgsagaap raprpasaag pdlrhvrski gstdnikhqp gggkgkvekr
      721 pesaaaapss epsagtkvap kvaakegvpk qpngkvqivs kkanyshvqs kcgskdnikh
      781 vpgggnvqiq nkkvdlskvs skcgskanik hkpgggdvki enqklnfkek aqakvgsldn
      841 vghspaggav kaeggaepaq lppangagpg pgeppagpal rengvgpgla alstadqrem
      901 qsldthiqet si
//
LOCUS       XP_041326165             911 aa            linear   VRT 06-MAY-2021
DEFINITION  microtubule-associated protein 4 isoform X7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326165
VERSION     XP_041326165.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470231.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523734.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..911
                     /product="microtubule-associated protein 4 isoform X7"
                     /calculated_mol_wt=90727
     Region          <320..457
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <423..744
                     /region_name="Herpes_BLLF1"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); pfam05109"
                     /db_xref="CDD:282904"
     Region          <691..712
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          755..784
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          786..815
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     Region          817..847
                     /region_name="Tubulin-binding"
                     /note="Tau and MAP protein, tubulin-binding repeat;
                     pfam00418"
                     /db_xref="CDD:459807"
     CDS             1..911
                     /gene="MAP4"
                     /coded_by="XM_041470231.1:15..2750"
                     /db_xref="GeneID:121355064"
ORIGIN      
        1 mgaqqdmkgp dtsffveppv ppaateairt slpesptaaa apgnvpaaap alpgeaaate
       61 gpkaaapgaa svppadaafl paekagdtkp pqspaaaaas pfqatdggfs papeanpakg
      121 vndtstpgte lgfapaadag shhgvdlgfa paagveshqa tdlgfgpaag methqamdfg
      181 fspsagvesh qnidlgfapa agveshqnmd lgfapaagve shqtmdlgfa paadaephht
      241 ldlgfapaad nkaqhvmgse fssaaevnhh hgldsgfapa apakpvpavd ggnveaqpgp
      301 aaapslavsg elltseaalq qdkcpaeata kveaeskvpe icvdhseemk drkpppspre
      361 eeipgktqqp peaaaeakga lenkelpeks apaengetqk eeaehnhvqh aepqegktlq
      421 eptakaeepk aaeavsgndi tappnkelpp spekkskpaa ssstakaaaa kakpsastsp
      481 krpssatpgt nkkptsptaa papgttskrp gtsstrpstl tpketkpkva dakpaekrts
      541 lskpassttp ktpsrsssaa prttapspvt aaaaakttaa tppkrptsik tdtkpadakk
      601 ppakspsdss rpksapggat kssattpspa assvpgaaps rpkpkatapk aatastvsad
      661 akkapakaag skgsagaapr aprpasaagp dlrhvrskig stdnikhqpg ggkgkvekrp
      721 esaaaapsse psagtkvapk vaakegvpkq pngkvqivsk kanyshvqsk cgskdnikhv
      781 pgggnvqiqn kkvdlskvss kcgskanikh kpgggdvkie nqklnfkeka qakvgsldnv
      841 ghspaggavk aeggaepaql ppangagpgp geppagpalr engvgpglaa lstadqremq
      901 sldthiqets i
//
LOCUS       XP_041326167             195 aa            linear   VRT 06-MAY-2021
DEFINITION  GATOR complex protein NPRL2-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326167
VERSION     XP_041326167.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470233.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523742.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..195
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..195
                     /product="GATOR complex protein NPRL2-like"
     Region          <10..185
                     /region_name="NPR3"
                     /note="Nitrogen Permease regulator of amino acid transport
                     activity 3; cl24021"
                     /db_xref="CDD:451662"
     CDS             1..195
                     /gene="LOC121355071"
                     /coded_by="XM_041470233.1:<1..588"
                     /db_xref="GeneID:121355071"
ORIGIN      
        1 slprylvpsq ilpyidgfrh vqkisaeadv elnlvriavq nllyygvvtl vsilqysnvy
       61 cttpkvqdlv ddkclqeecl syvtkqghkr aslrdvfqly cglspgttvr dlisrytlql
      121 qrvderrliq fglmkglirr lqkypvkvar dershparly tgchsydeic cktgmsykel
      181 derlendpni ivcwk
//
LOCUS       XP_041326168             234 aa            linear   VRT 06-MAY-2021
DEFINITION  nucleoside diphosphate kinase 6-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326168
VERSION     XP_041326168.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470234.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..234
                     /product="nucleoside diphosphate kinase 6-like"
     Region          13..149
                     /region_name="NDPk6"
                     /note="Nucleoside diphosphate kinase 6 (NDP kinase 6,
                     NDPk6, NM23-H6; NME6; Inhibitor of p53-induced
                     apoptosis-alpha, IPIA-alpha): The nm23-H6 gene encoding
                     NDPk6 is expressed mainly in mitochondria, but also found
                     at a lower level in most tissues. NDPk6 has...; cd04414"
                     /db_xref="CDD:239877"
     Site            order(16,63,71,99,105,119,129,132,134..135,143)
                     /site_type="active"
                     /db_xref="CDD:239877"
     Site            order(20,26..27,34,37,40,49..51)
                     /site_type="other"
                     /note="multimer interface [polypeptide binding]"
                     /db_xref="CDD:239877"
     CDS             1..234
                     /gene="LOC121355072"
                     /coded_by="XM_041470234.1:<1..705"
                     /db_xref="GeneID:121355072"
ORIGIN      
        1 gsacacplpr daallkpdav ahplvrerrl fpqavhdail rhrflivrak elrcgaeqsr
       61 rfyrehagrf fyqrlvefma sgpmwayila hedavplwrs lmgptkvfra rhsdpdsirg
      121 aygltdtrnt thgsdspasa sreiafffpe fdeqrwyeqd eprlrrgqlf ysaqervhrv
      181 lgaqpaqvpg qgvpgwpgsp cghspgqqtq scaafqgvwe ressvvlpgi rllv
//
LOCUS       XP_041326169            2678 aa            linear   VRT 06-MAY-2021
DEFINITION  filamin-C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326169
VERSION     XP_041326169.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470235.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2678
                     /product="filamin-C isoform X1"
                     /calculated_mol_wt=283694
     Region          17..141
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(37,90,92..93,96..97,99,112..116,121,123..124,
                     126..127,130..131,134)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          145..249
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(160,197,200..201,203,220..224,231,233..234,236..237,
                     240..241,244)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          260..356
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          360..456
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          459..552
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          556..639
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          652..746
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          749..849
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          852..948
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          953..1044
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1047..1137
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1140..1232
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1236..1332
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1335..1425
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1428..1521
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1524..1618
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1621..1721
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <1739..1803
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1807..1896
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1989..2078
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <2198..2262
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2268..2356
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2372..2445
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Region          2458..2548
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2588..2678
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     CDS             1..2678
                     /gene="FLNC"
                     /coded_by="XM_041470235.1:1076..9112"
                     /db_xref="GeneID:121355073"
ORIGIN      
        1 mnstyeaapg edpeelpate kdlaedapwk kiqqntftrw cnehlkcvqk rivdlqrdls
       61 dglrlialle vlsqkkmgrk hhprpnfrqm klenvsvale flerehiklv sidskaivdg
      121 nlklilgliw tlilhysism pmweeeedde grhqtpkqrl lgwiqnkvpq lpitnfnrdw
      181 rdgkalgalv dncapgerrr apmsrggqrg gklrlplqvi apeeivdpnv dehsvmtyls
      241 qfpkaklrpg apvrprlpep graraygpgi epqgnvvlrp aqftvetlea gmgevlvyve
      301 dpeghteeak vvpnndkkrt ysvtyvpkvg glhkvtvlfa gqnidgspfg vnvgmalgda
      361 skvtargpgl epvgnvanka tyfdiytaga gsgdvgvvit dpqgrrdtve vmledkgdnv
      421 frctyrpvle gphticvtya gaqvprspft vnvaeactps avratgrglq prgvrvqdva
      481 dfkvltrgag sgdlrvtlrg pggteepvtv rdvgdgvyec eyvprvpgty qvsitwggya
      541 iprspfevqv spqpgaqkvr awgpgleggv vgrpadfvve avgtevgtlg fsiegpsqar
      601 iecddkgdgs cdvrywptep glyavhvvcd dedirdspfm adirpappds wpdkvkafgp
      661 gleptgcivd rpaeftidar gagkgplkly aqdaegfpid ikvkdngdgt fhcvyvptka
      721 mkhtvivawg gvntpnspfr vsvgegshps rvkvhgpgve ktglkanept yftvdcseag
      781 qgdvsigikc apgvvgplea didfdiiknd ndtftvkyta pgaglytimv lfanqeipss
      841 pfrikvdpsh daskvkaegp glsrtgvevg tpthfrvqtr gagkapldvr fvgsgpgpav
      901 adfevidnhd ysytvkytpl qqgplsvvvt yggdpipksp fpvtvapplq lgkvkvqgln
      961 skaevgqvqe fqveaqgagg qgqlevkvtg psrrpvpctv gpappggphp vtftpfeegp
     1021 hrvevtydgh pvpgspfpve allppdpskv vasgpglkgg rvgvpapfsi atqgagsggl
     1081 gltvegpcea kiecqdngdg scavsylpta pgeyhinilf agrhipgspf taavtapfdp
     1141 akvtasgpgl ergrageaav fsvdcsqage aeltieirse agvkaevlvq nnrdgtyait
     1201 ytpacagayt itinygglpv pncpvrvtvd pavdtssvkv ygkgveprgv lrevgteftv
     1261 daralaptgg phvrarvlnp sgtpidtfvt dlgdgtyrve ytpfeeglhl vevtyddvav
     1321 pkspfrvgva egcdptrvra hgpglegglv gtanhftvet rgagtgglgl aiegpseakm
     1381 sckdnkdgsc aveyvpftpg dydvnitfgg hpipgspfrv rvrdavdask vtcsgpglgp
     1441 svrarlpqsf tvdvsaagra alevtllgpt glpepveird ngdgthkvty tpatdgpytv
     1501 svkyggqevp rspfkvtalp thdaskvras gpglsaggip aslpveftid ardagegllt
     1561 vqildpegqp kkasirdngd gtytvsyvpd vpgrytstvk yggdeipasp frvlavpsgd
     1621 askclvtvsi gghglgaclg ptiqigeetv itvdakaagq gkvtckvstp dgaeldvdvv
     1681 enhdgtfdif ytapepgkyv itirfggehv pnspfhvmat eeppattenl rpfnlvipft
     1741 vqkgeitgev rmpsgktarp sitdnkdgtv tvhyapsekg lhemdirydg nhipgsplqf
     1801 yvdainprhv saygpglshg mvnkpctfti vtkdageggl slavegpska eitcqdnkdg
     1861 tctvsylpta pgdysiivrf ddkhipgspf takitgddsm rtsqlnvgts tdvslkiaet
     1921 dlsllaatir apsgneepcl lkrlpnrhig isftpkevge hvvsvrksgq hvtnspfkil
     1981 vgqseigdag rvkvwgqgll eghtfevaef ivdtrsagyg glglsiegps kvdincedme
     2041 dgtckvtycp tepgnyiini kfadkhvpgs pftvkvtgeg rmkesitrrr qapsiatvgs
     2101 tcdlnlkipg nwfqmvsaqe rltrtftrss htytrterte isktrggett revhveestr
     2161 vggafprapp epfgafgafg tregigafaa parahegeas aqelsaqvls psgqrreaev
     2221 vpggagvysv rfvpqetgah tvsvkfrgqh vpgspfqftv gplgeggahk vraggtglqr
     2281 avagtpaefs iwtreagagg lsiavegpsk aeisfedrkd gscgvsylvq epgdyevsik
     2341 fneehipdsp fivpvashsd darrltvtsl qetvavnqpa sfavqlngar gvidakvhtp
     2401 agvveecyvs eldsdryalg flprengvhs idlrfngrhv pgspfnirvg eqsqagdpgl
     2461 vtafgpgleg grtgvpsefl vktanagaga lavtidgpsk veldctevpe ghrvtytpma
     2521 pgnylisiky ggphhivgsp fkakvtgprl sgghslhets tvlvepvvra gsrgppafgg
     2581 vtkapsdagq vvargpglaa arlghknhft vdcskagtnm llvgvhgpka pceevhvkhe
     2641 gnrvytvtys vrergeyvll lrwgdrdvpg spfrvtaa
//
LOCUS       XP_041326170            2678 aa            linear   VRT 06-MAY-2021
DEFINITION  filamin-C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326170
VERSION     XP_041326170.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470236.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2678
                     /product="filamin-C isoform X1"
                     /calculated_mol_wt=283694
     Region          17..141
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(37,90,92..93,96..97,99,112..116,121,123..124,
                     126..127,130..131,134)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          145..249
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(160,197,200..201,203,220..224,231,233..234,236..237,
                     240..241,244)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          260..356
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          360..456
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          459..552
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          556..639
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          652..746
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          749..849
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          852..948
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          953..1044
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1047..1137
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1140..1232
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1236..1332
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1335..1425
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1428..1521
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1524..1618
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1621..1721
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <1739..1803
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1807..1896
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1989..2078
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <2198..2262
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2268..2356
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2372..2445
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Region          2458..2548
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2588..2678
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     CDS             1..2678
                     /gene="FLNC"
                     /coded_by="XM_041470236.1:987..9023"
                     /db_xref="GeneID:121355073"
ORIGIN      
        1 mnstyeaapg edpeelpate kdlaedapwk kiqqntftrw cnehlkcvqk rivdlqrdls
       61 dglrlialle vlsqkkmgrk hhprpnfrqm klenvsvale flerehiklv sidskaivdg
      121 nlklilgliw tlilhysism pmweeeedde grhqtpkqrl lgwiqnkvpq lpitnfnrdw
      181 rdgkalgalv dncapgerrr apmsrggqrg gklrlplqvi apeeivdpnv dehsvmtyls
      241 qfpkaklrpg apvrprlpep graraygpgi epqgnvvlrp aqftvetlea gmgevlvyve
      301 dpeghteeak vvpnndkkrt ysvtyvpkvg glhkvtvlfa gqnidgspfg vnvgmalgda
      361 skvtargpgl epvgnvanka tyfdiytaga gsgdvgvvit dpqgrrdtve vmledkgdnv
      421 frctyrpvle gphticvtya gaqvprspft vnvaeactps avratgrglq prgvrvqdva
      481 dfkvltrgag sgdlrvtlrg pggteepvtv rdvgdgvyec eyvprvpgty qvsitwggya
      541 iprspfevqv spqpgaqkvr awgpgleggv vgrpadfvve avgtevgtlg fsiegpsqar
      601 iecddkgdgs cdvrywptep glyavhvvcd dedirdspfm adirpappds wpdkvkafgp
      661 gleptgcivd rpaeftidar gagkgplkly aqdaegfpid ikvkdngdgt fhcvyvptka
      721 mkhtvivawg gvntpnspfr vsvgegshps rvkvhgpgve ktglkanept yftvdcseag
      781 qgdvsigikc apgvvgplea didfdiiknd ndtftvkyta pgaglytimv lfanqeipss
      841 pfrikvdpsh daskvkaegp glsrtgvevg tpthfrvqtr gagkapldvr fvgsgpgpav
      901 adfevidnhd ysytvkytpl qqgplsvvvt yggdpipksp fpvtvapplq lgkvkvqgln
      961 skaevgqvqe fqveaqgagg qgqlevkvtg psrrpvpctv gpappggphp vtftpfeegp
     1021 hrvevtydgh pvpgspfpve allppdpskv vasgpglkgg rvgvpapfsi atqgagsggl
     1081 gltvegpcea kiecqdngdg scavsylpta pgeyhinilf agrhipgspf taavtapfdp
     1141 akvtasgpgl ergrageaav fsvdcsqage aeltieirse agvkaevlvq nnrdgtyait
     1201 ytpacagayt itinygglpv pncpvrvtvd pavdtssvkv ygkgveprgv lrevgteftv
     1261 daralaptgg phvrarvlnp sgtpidtfvt dlgdgtyrve ytpfeeglhl vevtyddvav
     1321 pkspfrvgva egcdptrvra hgpglegglv gtanhftvet rgagtgglgl aiegpseakm
     1381 sckdnkdgsc aveyvpftpg dydvnitfgg hpipgspfrv rvrdavdask vtcsgpglgp
     1441 svrarlpqsf tvdvsaagra alevtllgpt glpepveird ngdgthkvty tpatdgpytv
     1501 svkyggqevp rspfkvtalp thdaskvras gpglsaggip aslpveftid ardagegllt
     1561 vqildpegqp kkasirdngd gtytvsyvpd vpgrytstvk yggdeipasp frvlavpsgd
     1621 askclvtvsi gghglgaclg ptiqigeetv itvdakaagq gkvtckvstp dgaeldvdvv
     1681 enhdgtfdif ytapepgkyv itirfggehv pnspfhvmat eeppattenl rpfnlvipft
     1741 vqkgeitgev rmpsgktarp sitdnkdgtv tvhyapsekg lhemdirydg nhipgsplqf
     1801 yvdainprhv saygpglshg mvnkpctfti vtkdageggl slavegpska eitcqdnkdg
     1861 tctvsylpta pgdysiivrf ddkhipgspf takitgddsm rtsqlnvgts tdvslkiaet
     1921 dlsllaatir apsgneepcl lkrlpnrhig isftpkevge hvvsvrksgq hvtnspfkil
     1981 vgqseigdag rvkvwgqgll eghtfevaef ivdtrsagyg glglsiegps kvdincedme
     2041 dgtckvtycp tepgnyiini kfadkhvpgs pftvkvtgeg rmkesitrrr qapsiatvgs
     2101 tcdlnlkipg nwfqmvsaqe rltrtftrss htytrterte isktrggett revhveestr
     2161 vggafprapp epfgafgafg tregigafaa parahegeas aqelsaqvls psgqrreaev
     2221 vpggagvysv rfvpqetgah tvsvkfrgqh vpgspfqftv gplgeggahk vraggtglqr
     2281 avagtpaefs iwtreagagg lsiavegpsk aeisfedrkd gscgvsylvq epgdyevsik
     2341 fneehipdsp fivpvashsd darrltvtsl qetvavnqpa sfavqlngar gvidakvhtp
     2401 agvveecyvs eldsdryalg flprengvhs idlrfngrhv pgspfnirvg eqsqagdpgl
     2461 vtafgpgleg grtgvpsefl vktanagaga lavtidgpsk veldctevpe ghrvtytpma
     2521 pgnylisiky ggphhivgsp fkakvtgprl sgghslhets tvlvepvvra gsrgppafgg
     2581 vtkapsdagq vvargpglaa arlghknhft vdcskagtnm llvgvhgpka pceevhvkhe
     2641 gnrvytvtys vrergeyvll lrwgdrdvpg spfrvtaa
//
LOCUS       XP_041326171            2670 aa            linear   VRT 06-MAY-2021
DEFINITION  filamin-C isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326171
VERSION     XP_041326171.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470237.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2670
                     /product="filamin-C isoform X2"
                     /calculated_mol_wt=282973
     Region          17..141
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(37,90,92..93,96..97,99,112..116,121,123..124,
                     126..127,130..131,134)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          145..249
                     /region_name="CH_SF"
                     /note="calponin homology (CH) domain superfamily; cl00030"
                     /db_xref="CDD:469584"
     Site            order(160,197,200..201,203,220..224,231,233..234,236..237,
                     240..241,244)
                     /site_type="other"
                     /note="actin binding site [polypeptide binding]"
                     /db_xref="CDD:409031"
     Region          260..356
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          360..456
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          459..552
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          556..639
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          652..746
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          749..849
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          852..948
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          953..1044
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1047..1137
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1140..1232
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1236..1332
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1335..1425
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1428..1521
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1524..1618
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1621..1713
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <1731..1795
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1799..1888
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          1981..2070
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          <2190..2254
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2260..2348
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2364..2437
                     /region_name="Filamin"
                     /note="Filamin/ABP280 repeat; pfam00630"
                     /db_xref="CDD:395505"
     Region          2450..2540
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          2580..2670
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     CDS             1..2670
                     /gene="FLNC"
                     /coded_by="XM_041470237.1:1077..9089"
                     /db_xref="GeneID:121355073"
ORIGIN      
        1 mnstyeaapg edpeelpate kdlaedapwk kiqqntftrw cnehlkcvqk rivdlqrdls
       61 dglrlialle vlsqkkmgrk hhprpnfrqm klenvsvale flerehiklv sidskaivdg
      121 nlklilgliw tlilhysism pmweeeedde grhqtpkqrl lgwiqnkvpq lpitnfnrdw
      181 rdgkalgalv dncapgerrr apmsrggqrg gklrlplqvi apeeivdpnv dehsvmtyls
      241 qfpkaklrpg apvrprlpep graraygpgi epqgnvvlrp aqftvetlea gmgevlvyve
      301 dpeghteeak vvpnndkkrt ysvtyvpkvg glhkvtvlfa gqnidgspfg vnvgmalgda
      361 skvtargpgl epvgnvanka tyfdiytaga gsgdvgvvit dpqgrrdtve vmledkgdnv
      421 frctyrpvle gphticvtya gaqvprspft vnvaeactps avratgrglq prgvrvqdva
      481 dfkvltrgag sgdlrvtlrg pggteepvtv rdvgdgvyec eyvprvpgty qvsitwggya
      541 iprspfevqv spqpgaqkvr awgpgleggv vgrpadfvve avgtevgtlg fsiegpsqar
      601 iecddkgdgs cdvrywptep glyavhvvcd dedirdspfm adirpappds wpdkvkafgp
      661 gleptgcivd rpaeftidar gagkgplkly aqdaegfpid ikvkdngdgt fhcvyvptka
      721 mkhtvivawg gvntpnspfr vsvgegshps rvkvhgpgve ktglkanept yftvdcseag
      781 qgdvsigikc apgvvgplea didfdiiknd ndtftvkyta pgaglytimv lfanqeipss
      841 pfrikvdpsh daskvkaegp glsrtgvevg tpthfrvqtr gagkapldvr fvgsgpgpav
      901 adfevidnhd ysytvkytpl qqgplsvvvt yggdpipksp fpvtvapplq lgkvkvqgln
      961 skaevgqvqe fqveaqgagg qgqlevkvtg psrrpvpctv gpappggphp vtftpfeegp
     1021 hrvevtydgh pvpgspfpve allppdpskv vasgpglkgg rvgvpapfsi atqgagsggl
     1081 gltvegpcea kiecqdngdg scavsylpta pgeyhinilf agrhipgspf taavtapfdp
     1141 akvtasgpgl ergrageaav fsvdcsqage aeltieirse agvkaevlvq nnrdgtyait
     1201 ytpacagayt itinygglpv pncpvrvtvd pavdtssvkv ygkgveprgv lrevgteftv
     1261 daralaptgg phvrarvlnp sgtpidtfvt dlgdgtyrve ytpfeeglhl vevtyddvav
     1321 pkspfrvgva egcdptrvra hgpglegglv gtanhftvet rgagtgglgl aiegpseakm
     1381 sckdnkdgsc aveyvpftpg dydvnitfgg hpipgspfrv rvrdavdask vtcsgpglgp
     1441 svrarlpqsf tvdvsaagra alevtllgpt glpepveird ngdgthkvty tpatdgpytv
     1501 svkyggqevp rspfkvtalp thdaskvras gpglsaggip aslpveftid ardagegllt
     1561 vqildpegqp kkasirdngd gtytvsyvpd vpgrytstvk yggdeipasp frvlavpsgd
     1621 askclvtgac lgptiqigee tvitvdakaa gqgkvtckvs tpdgaeldvd vvenhdgtfd
     1681 ifytapepgk yvitirfgge hvpnspfhvm ateeppatte nlrpfnlvip ftvqkgeitg
     1741 evrmpsgkta rpsitdnkdg tvtvhyapse kglhemdiry dgnhipgspl qfyvdainpr
     1801 hvsaygpgls hgmvnkpctf tivtkdageg glslavegps kaeitcqdnk dgtctvsylp
     1861 tapgdysiiv rfddkhipgs pftakitgdd smrtsqlnvg tstdvslkia etdlsllaat
     1921 irapsgneep cllkrlpnrh igisftpkev gehvvsvrks gqhvtnspfk ilvgqseigd
     1981 agrvkvwgqg lleghtfeva efivdtrsag ygglglsieg pskvdinced medgtckvty
     2041 cptepgnyii nikfadkhvp gspftvkvtg egrmkesitr rrqapsiatv gstcdlnlki
     2101 pgnwfqmvsa qerltrtftr sshtytrter teisktrgge ttrevhvees trvggafpra
     2161 ppepfgafga fgtregigaf aaparahege asaqelsaqv lspsgqrrea evvpggagvy
     2221 svrfvpqetg ahtvsvkfrg qhvpgspfqf tvgplgegga hkvraggtgl qravagtpae
     2281 fsiwtreaga gglsiavegp skaeisfedr kdgscgvsyl vqepgdyevs ikfneehipd
     2341 spfivpvash sddarrltvt slqetvavnq pasfavqlng argvidakvh tpagvveecy
     2401 vseldsdrya lgflprengv hsidlrfngr hvpgspfnir vgeqsqagdp glvtafgpgl
     2461 eggrtgvpse flvktanaga galavtidgp skveldctev peghrvtytp mapgnylisi
     2521 kyggphhivg spfkakvtgp rlsgghslhe tstvlvepvv ragsrgppaf ggvtkapsda
     2581 gqvvargpgl aaarlghknh ftvdcskagt nmllvgvhgp kapceevhvk hegnrvytvt
     2641 ysvrergeyv lllrwgdrdv pgspfrvtaa
//
LOCUS       XP_041326172             947 aa            linear   VRT 06-MAY-2021
DEFINITION  transportin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326172
VERSION     XP_041326172.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470238.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..947
                     /product="transportin-3 isoform X1"
                     /calculated_mol_wt=106076
     Region          35..98
                     /region_name="IBN_N"
                     /note="Importin-beta N-terminal domain; smart00913"
                     /db_xref="CDD:197981"
     Region          122..251
                     /region_name="Xpo1"
                     /note="Exportin 1-like protein; pfam08389"
                     /db_xref="CDD:462459"
     CDS             1..947
                     /gene="TNPO3"
                     /coded_by="XM_041470238.1:67..2910"
                     /db_xref="GeneID:121355074"
ORIGIN      
        1 mergpgrpsl qlvqqavqal yhdpdpsgke rascwlgelq rsvhaweisd qllqihqdve
       61 scyfaaqtmk mkiqtsfyel ptdshaslrd sllshiqnlk dlspvivtql alaiadlalq
      121 maswkgcvqt lvekysndvt slpflleilt vlpeevhsrs lriganrrte iiedlayyss
      181 tvvsllvtcv ekagneekml ikifrclgsw fnlgvldstf manskllsll fevlqqdkts
      241 snlheaasdc vcsalyaien vetnlplalq lfqgvltles ayhmavared ldkvlnycrv
      301 ftelcetfld kivctpgqgl gdlrtlelll icaghpqyev veisfnfwyr lgehlyktdd
      361 avihsifkay iqrllhalar hcqldsdheg vpeetddfge frmrvsdlvk dliflvgsve
      421 cfaqlyatlk dgnppwevte avlfimasia ksvdqennpt lvevlegvvr lpesvhtavr
      481 ytsielvgem sevvdrnpqf lgesrapaap prppppdrap vsadpvlgyl mkglcdrrla
      541 saaakaihni csvcrdhmaq hfsglleiar aldsfalspe aavgllkgta lvlarlplek
      601 iseclselca vqvlalkkll sqepsnglss dptvpldrla vifrhtnpiv engqvhpcqk
      661 viqeiwpvls etlnkhsadn riverccrcl rfavrcvgkg saallqplvt qmvnvyrehq
      721 hscflylgsi lvdeygmeeg crqglldmlq alciptfqll eqpnglqnhp dtvddlfrla
      781 arfiqrspit llrsqvmipi lqwaiaattl dhrdancsvm kflrdlihtg vandheedfe
      841 vrkelinqvm tqlgqqlvnq llqtccfclp pytlpdvaev lweimqidrp tfcrwlensl
      901 kglpkettgg aiqvthkqlt dfhkqvtsae eckqvcwalr dftrlfr
//
LOCUS       XP_041326173             925 aa            linear   VRT 06-MAY-2021
DEFINITION  transportin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326173
VERSION     XP_041326173.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470239.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..925
                     /product="transportin-3 isoform X2"
                     /calculated_mol_wt=103900
     Region          35..98
                     /region_name="IBN_N"
                     /note="Importin-beta N-terminal domain; smart00913"
                     /db_xref="CDD:197981"
     Region          122..251
                     /region_name="Xpo1"
                     /note="Exportin 1-like protein; pfam08389"
                     /db_xref="CDD:462459"
     CDS             1..925
                     /gene="TNPO3"
                     /coded_by="XM_041470239.1:67..2844"
                     /db_xref="GeneID:121355074"
ORIGIN      
        1 mergpgrpsl qlvqqavqal yhdpdpsgke rascwlgelq rsvhaweisd qllqihqdve
       61 scyfaaqtmk mkiqtsfyel ptdshaslrd sllshiqnlk dlspvivtql alaiadlalq
      121 maswkgcvqt lvekysndvt slpflleilt vlpeevhsrs lriganrrte iiedlayyss
      181 tvvsllvtcv ekagneekml ikifrclgsw fnlgvldstf manskllsll fevlqqdkts
      241 snlheaasdc vcsalyaien vetnlplalq lfqgvltles ayhmavared ldkvlnycrv
      301 ftelcetfld kivctpgqgl gdlrtlelll icaghpqyev veisfnfwyr lgehlyktdd
      361 avihsifkay iqrllhalar hcqldsdheg vpeetddfge frmrvsdlvk dliflvgsve
      421 cfaqlyatlk dgnppwevte avlfimasia ksvdqennpt lvevlegvvr lpesvhtavr
      481 ytsielvgem sevvdrnpqf ldpvlgylmk glcdrrlasa aakaihnics vcrdhmaqhf
      541 sglleiaral dsfalspeaa vgllkgtalv larlplekis eclselcavq vlalkkllsq
      601 epsnglssdp tvpldrlavi frhtnpiven gqvhpcqkvi qeiwpvlset lnkhsadnri
      661 verccrclrf avrcvgkgsa allqplvtqm vnvyrehqhs cflylgsilv deygmeegcr
      721 qglldmlqal ciptfqlleq pnglqnhpdt vddlfrlaar fiqrspitll rsqvmipilq
      781 waiaattldh rdancsvmkf lrdlihtgva ndheedfevr kelinqvmtq lgqqlvnqll
      841 qtccfclppy tlpdvaevlw eimqidrptf crwlenslkg lpkettggai qvthkqltdf
      901 hkqvtsaeec kqvcwalrdf trlfr
//
LOCUS       XP_041326174             656 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326174
VERSION     XP_041326174.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470240.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..656
                     /product="leucine-rich repeat-containing protein 4"
                     /calculated_mol_wt=72613
     Region          48..81
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          <77..325
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          79..102
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          103..126
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          127..150
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          151..174
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          175..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          200..221
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          222..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          246..269
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          270..291
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          302..353
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     Region          361..443
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          372..376
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          383..387
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          410..413
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          423..428
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          436..439
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..656
                     /gene="LRRC4"
                     /coded_by="XM_041470240.1:99..2069"
                     /db_xref="GeneID:121355075"
ORIGIN      
        1 mkllwqvtvh hlrrhrrhrt wpgllaaslt lhawllataa aspgpqscps vcscsnqfsk
       61 vvctrrglae vppgipsntr ylnlmenniq miqadtfrhl hhlevlqlgr nairqievga
      121 fnglaslntl elfdnwltvi psgafeylsk lrelwlrnnp iesipsyafn rvpslmrldl
      181 gelkkleyis egafeglynl kylnlgmcni kdmpnltplv gleelemsgn nfpeikpgsf
      241 hglkslkklw imnsqinlie rnafddltal velnlahnnl sslphdlfap lrylvelhlh
      301 hnpwdcdcdi lwlswwlrey iptnstccgr chaplhmrgr flvevdqtsf qcsapfimda
      361 padlnisegr vaelrcrtps mssvrwllpn gtvlshassh prlsvlndgt lnfshvlltd
      421 tglytcmvtn vagnsnasaf lnvstaelnt snysffttvt vetteisped vspkftkpvp
      481 ttstgyqpay tttttvlvqt trppkqvavp tadagdklqt sldevmkttk iiigcfvavt
      541 llaaamlivf yklrkrhqqr stvtaartve iiqvdediap aaaatpaaap aggagegavv
      601 lpnihehlny ntykaghgah wtenalgnsl hppgttladp yliqthpkek vqetqi
//
LOCUS       XP_041326175             576 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon regulatory factor 5 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326175
VERSION     XP_041326175.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470241.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..576
                     /product="interferon regulatory factor 5 isoform X1"
                     /calculated_mol_wt=61590
     Region          8..112
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(41,80,82..83,86)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(85..86,88,91)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          242..412
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..576
                     /gene="IRF5"
                     /coded_by="XM_041470241.1:767..2497"
                     /db_xref="GeneID:121355077"
ORIGIN      
        1 mepprrvrlk pwlvaqvssr rfpglrwldp ehrrfvipwg hatrnppgpq dhdtifkawa
       61 qetgrfragd ppdpprwkat lrcalnksre frllvdgprg spaqpfrvye lceeppggad
      121 ggdeddygcs geedvsqlhk mtslsihdtq hggdllppyp wakeeappfa ghcppggpfg
      181 ppppallqge aggthggpel lpgalaemgp plgppgpsst cpvaptehli pdllvsphtl
      241 pltdlelkfq yrgrqvcalt vsnphgcrlf hssleptreq eelfgpltle qvpfpapdai
      301 pnekqrfyth qlldvldrgl ilelqgqdlf alrlcqckvf wtgpcaapqp gpnpiqrerr
      361 tklfslegfl ngliqfqkgq tptpppfeif lcfgeewpdq kpkekklitv qvrgraggsg
      421 gvpaavtpca paggagggaa aagdvlrgal lvgrqhpaad laprpqgqdg gavqgaapav
      481 aeppaaaaga aparplrgal gaarapaplt gsgdsrgtas rdgytppegt acarppcphs
      541 shrllpqnqt kenpekgkkk trkkpnkktn kksrtk
//
LOCUS       XP_041326176             569 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon regulatory factor 5 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326176
VERSION     XP_041326176.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470242.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="interferon regulatory factor 5 isoform X2"
                     /calculated_mol_wt=60381
     Region          8..112
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(41,80,82..83,86)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(85..86,88,91)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          248..418
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..569
                     /gene="IRF5"
                     /coded_by="XM_041470242.1:783..2492"
                     /db_xref="GeneID:121355077"
ORIGIN      
        1 mepprrvrlk pwlvaqvssr rfpglrwldp ehrrfvipwg hatrnppgpq dhdtifkawa
       61 qetgrfragd ppdpprwkat lrcalnksre frllvdgprg spaqpfrvye lceeppggaa
      121 plnladggde ddygcsgeed vsqlhkmtsl sihdtqhggd llppypwake eappfaghcp
      181 pggpfgpppp allqgeaggt hggpellpga laemgpplgp pgpsstcpva ptehlipdll
      241 vsphtlpltd lelkfqyrgr qvcaltvsnp hgcrlfhssl eptreqeelf gpltleqvpf
      301 papdaipnek qrfythqlld vldrglilel qgqdlfalrl cqckvfwtgp caapqpgpnp
      361 iqrerrtklf slegflngli qfqkgqtptp ppfeiflcfg eewpdqkpke kklitvqvrg
      421 raggsggvpa avtpcapagg agggaaaagd vlrgallvgr qhpaadlapr pqgqdggavq
      481 gaapavaepp aaaagaapar plrgalgaar apapltgsgd srgtasrges rcghlgwwag
      541 ppstvlipvp vppelpvtst ralcrgral
//
LOCUS       XP_041326177             493 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon regulatory factor 5 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326177
VERSION     XP_041326177.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470243.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="interferon regulatory factor 5 isoform X3"
                     /calculated_mol_wt=54486
     Region          8..112
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(41,80,82..83,86)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(85..86,88,91)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          248..431
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..493
                     /gene="IRF5"
                     /coded_by="XM_041470243.1:780..2261"
                     /db_xref="GeneID:121355077"
ORIGIN      
        1 mepprrvrlk pwlvaqvssr rfpglrwldp ehrrfvipwg hatrnppgpq dhdtifkawa
       61 qetgrfragd ppdpprwkat lrcalnksre frllvdgprg spaqpfrvye lceeppggaa
      121 plnladggde ddygcsgeed vsqlhkmtsl sihdtqhggd llppypwake eappfaghcp
      181 pggpfgpppp allqgeaggt hggpellpga laemgpplgp pgpsstcpva ptehlipdll
      241 vsphtlpltd lelkfqyrgr qvcaltvsnp hgcrlfhssl eptreqeelf gpltleqvpf
      301 papdaipnek qrfythqlld vldrglilel qgqdlfalrl cqckvfwtgp caapqpgpnp
      361 iqrerrtklf slegflngli qfqkgqtptp ppfeiflcfg eewpdqkpke kklitvqvvp
      421 vaarlllemf sgelswsads iplqishpdl kdrmveqfke lhqlwqshqr lppaqpppgp
      481 sagpwalpgp lph
//
LOCUS       XP_041326178             487 aa            linear   VRT 06-MAY-2021
DEFINITION  interferon regulatory factor 5 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326178
VERSION     XP_041326178.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470244.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..487
                     /product="interferon regulatory factor 5 isoform X4"
                     /calculated_mol_wt=53907
     Region          8..112
                     /region_name="IRF"
                     /note="Interferon regulatory factor transcription factor;
                     pfam00605"
                     /db_xref="CDD:459863"
     Site            order(41,80,82..83,86)
                     /site_type="other"
                     /note="DNA sequence recognition sites [nucleotide
                     binding]"
                     /db_xref="CDD:238051"
     Site            order(85..86,88,91)
                     /site_type="metal-binding"
                     /db_xref="CDD:238051"
     Region          242..425
                     /region_name="IRF-3"
                     /note="Interferon-regulatory factor 3; pfam10401"
                     /db_xref="CDD:463076"
     CDS             1..487
                     /gene="IRF5"
                     /coded_by="XM_041470244.1:777..2240"
                     /db_xref="GeneID:121355077"
ORIGIN      
        1 mepprrvrlk pwlvaqvssr rfpglrwldp ehrrfvipwg hatrnppgpq dhdtifkawa
       61 qetgrfragd ppdpprwkat lrcalnksre frllvdgprg spaqpfrvye lceeppggad
      121 ggdeddygcs geedvsqlhk mtslsihdtq hggdllppyp wakeeappfa ghcppggpfg
      181 ppppallqge aggthggpel lpgalaemgp plgppgpsst cpvaptehli pdllvsphtl
      241 pltdlelkfq yrgrqvcalt vsnphgcrlf hssleptreq eelfgpltle qvpfpapdai
      301 pnekqrfyth qlldvldrgl ilelqgqdlf alrlcqckvf wtgpcaapqp gpnpiqrerr
      361 tklfslegfl ngliqfqkgq tptpppfeif lcfgeewpdq kpkekklitv qvvpvaarll
      421 lemfsgelsw sadsiplqis hpdlkdrmve qfkelhqlwq shqrlppaqp ppgpsagpwa
      481 lpgplph
//
LOCUS       XP_041326180             552 aa            linear   VRT 06-MAY-2021
DEFINITION  inosine-5'-monophosphate dehydrogenase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326180
VERSION     XP_041326180.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470246.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..552
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..552
                     /product="inosine-5'-monophosphate dehydrogenase 1"
                     /calculated_mol_wt=58716
     Region          20..516
                     /region_name="PTZ00314"
                     /note="inosine-5'-monophosphate dehydrogenase;
                     Provisional"
                     /db_xref="CDD:240355"
     CDS             1..552
                     /gene="IMPDH1"
                     /coded_by="XM_041470246.1:21..1679"
                     /db_xref="GeneID:121355078"
ORIGIN      
        1 mgegepsmaq qlisgagyvp edgltaqqlf acadgltynd flilpgyidf tadevdltsa
       61 ltrtitlktp lvsspmdtvt egdmaiamal nggigiihhn ctpefqasev rkvkrfeqgf
      121 iteplvmspa htvgdvwdak arlgfsgvpv thsgrlggrl egivtsrdid flregdratp
      181 laevmtkrrd lvvapagvtl keaneilqrs kkgklpivns rdelvalmar tdlkknrehp
      241 aaskdgrkql rvgaaigtrd ddkyrldllv qagadlvvld ssqgnsrfql smiryikaky
      301 pelqvvggnv vtaaqaknli dagvdalrvg mgsgsicitq evlacdhaqa tavyrvaeya
      361 rrfgvpviad ggirspghav kalalgastv mmgsllaatt eapgefffse gvrlkqyrgm
      421 gsldameqga gsqkryfseg davkvaqgvs gsvqdkgsih kfvpyllagl qhgcqdlgar
      481 slsalrsmmf agelkferrt vaaqveggvh glhsftvlpl prggcpeegs pragaprpep
      541 agtppaprhr rc
//
LOCUS       XP_041326181             363 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326181
VERSION     XP_041326181.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470247.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="acrosin-like isoform X1"
                     /calculated_mol_wt=39308
     Region          43..275
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(86,135,230)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(224,251,253)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..363
                     /gene="LOC121355079"
                     /coded_by="XM_041470247.1:2520..3611"
                     /db_xref="GeneID:121355079"
ORIGIN      
        1 mkefsvlgev trgtcglrpm asdhssaald ydaaasaagn srvggssvqp gawpgivsiq
       61 atwengtwhm csgvllssqw vltvahcfar aggvstwnvv mgatdlsqpg pkaavrriqr
      121 llvhqhyvpa tarndialve ldqpvecsdy iqlgcvpdts lrvselkscy iagwnfaraq
      181 gsgmvlresk vhlmdtelcn sspwyagavh adnlcagypq ggidtcqgds ggplvckdnd
      241 adyywlvgln swgrgcdrar hpgiytstqh fynwillqtg lspaeragpa pepvvtsape
      301 eepeeaeepe epeehinltp eysqrpavts sgtslpmafp hqflvqfwnl lqeflqfqkd
      361 kka
//
LOCUS       XP_041326182             363 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326182
VERSION     XP_041326182.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470248.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="acrosin-like isoform X1"
                     /calculated_mol_wt=39308
     Region          43..275
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(86,135,230)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(224,251,253)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..363
                     /gene="LOC121355079"
                     /coded_by="XM_041470248.1:2470..3561"
                     /db_xref="GeneID:121355079"
ORIGIN      
        1 mkefsvlgev trgtcglrpm asdhssaald ydaaasaagn srvggssvqp gawpgivsiq
       61 atwengtwhm csgvllssqw vltvahcfar aggvstwnvv mgatdlsqpg pkaavrriqr
      121 llvhqhyvpa tarndialve ldqpvecsdy iqlgcvpdts lrvselkscy iagwnfaraq
      181 gsgmvlresk vhlmdtelcn sspwyagavh adnlcagypq ggidtcqgds ggplvckdnd
      241 adyywlvgln swgrgcdrar hpgiytstqh fynwillqtg lspaeragpa pepvvtsape
      301 eepeeaeepe epeehinltp eysqrpavts sgtslpmafp hqflvqfwnl lqeflqfqkd
      361 kka
//
LOCUS       XP_041326183             326 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326183
VERSION     XP_041326183.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470249.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..326
                     /product="acrosin-like isoform X2"
                     /calculated_mol_wt=35348
     Region          43..238
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(86,135,193)
                     /site_type="active"
                     /db_xref="CDD:238113"
     CDS             1..326
                     /gene="LOC121355079"
                     /coded_by="XM_041470249.1:2728..3708"
                     /db_xref="GeneID:121355079"
ORIGIN      
        1 mkefsvlgev trgtcglrpm asdhssaald ydaaasaagn srvggssvqp gawpgivsiq
       61 atwengtwhm csgvllssqw vltvahcfar aggvstwnvv mgatdlsqpg pkaavrriqr
      121 llvhqhyvpa tarndialve ldqpvecsdy iqlgcvpdts lrvselkscy iagwnfarap
      181 tvpepsllaq gdsggplvck dndadyywlv glnswgrgcd rarhpgiyts tqhfynwill
      241 qtglspaera gpapepvvts apeeepeeae epeepeehin ltpeysqrpa vtssgtslpm
      301 afphqflvqf wnllqeflqf qkdkka
//
LOCUS       XP_041326184             309 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326184
VERSION     XP_041326184.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470250.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..309
                     /product="acrosin-like isoform X3"
                     /calculated_mol_wt=33694
     Region          38..221
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(170,197,199)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..309
                     /gene="LOC121355079"
                     /coded_by="XM_041470250.1:137..1066"
                     /db_xref="GeneID:121355079"
ORIGIN      
        1 mspehgqvps sqqkagkcwa aaapgsapcq psvhllprgv stwnvvmgat dlsqpgpkaa
       61 vrriqrllvh qhyvpatarn dialveldqp vecsdyiqlg cvpdtslrvs elkscyiagw
      121 nfaraqgsgm vlreskvhlm dtelcnsspw yagavhadnl cagypqggid tcqgdsggpl
      181 vckdndadyy wlvglnswgr gcdrarhpgi ytstqhfynw illqtglspa eragpapepv
      241 vtsapeeepe eaeepeepee hinltpeysq rpavtssgts lpmafphqfl vqfwnllqef
      301 lqfqkdkka
//
LOCUS       XP_041326185             283 aa            linear   VRT 06-MAY-2021
DEFINITION  acrosin-like isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326185
VERSION     XP_041326185.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470251.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="acrosin-like isoform X4"
                     /calculated_mol_wt=31179
     Region          12..195
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(144,171,173)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..283
                     /gene="LOC121355079"
                     /coded_by="XM_041470251.1:2728..3579"
                     /db_xref="GeneID:121355079"
ORIGIN      
        1 mkefsvlgev trgvstwnvv mgatdlsqpg pkaavrriqr llvhqhyvpa tarndialve
       61 ldqpvecsdy iqlgcvpdts lrvselkscy iagwnfaraq gsgmvlresk vhlmdtelcn
      121 sspwyagavh adnlcagypq ggidtcqgds ggplvckdnd adyywlvgln swgrgcdrar
      181 hpgiytstqh fynwillqtg lspaeragpa pepvvtsape eepeeaeepe epeehinltp
      241 eysqrpavts sgtslpmafp hqflvqfwnl lqeflqfqkd kka
//
LOCUS       XP_041326186             346 aa            linear   VRT 06-MAY-2021
DEFINITION  short-wave-sensitive opsin 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326186
VERSION     XP_041326186.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470252.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..346
                     /product="short-wave-sensitive opsin 1"
                     /calculated_mol_wt=38779
     Region          32..311
                     /region_name="7tmA_SWS1_opsin"
                     /note="short wave-sensitive 1 opsins, member of the class
                     A family of seven-transmembrane G protein-coupled
                     receptors; cd15076"
                     /db_xref="CDD:320204"
     Region          33..59
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320204"
     Region          66..93
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320204"
     Region          104..134
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320204"
     Site            order(107,111..112,115..116,180..183,201..202,206,259,263,
                     286,290)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320204"
     Region          145..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320204"
     Region          194..224
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320204"
     Region          239..269
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320204"
     Region          279..304
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320204"
     CDS             1..346
                     /gene="OPN1SW"
                     /coded_by="XM_041470252.1:504..1544"
                     /db_xref="GeneID:121355080"
ORIGIN      
        1 mdeeefylfk nqssvgpwdg pqyhiapkwa fylqtifmgl vfmagtplna ivlivtikyk
       61 klrqplnyil vnisvsglmc cvfciftvfi assqgyfvfg khmcafegft gatggmvtgw
      121 slaflafery ivickpfgnf rfnsrhallv vaatwiigvg vaippffgws ryipeglqcs
      181 cgpdwytvgt kykseyytwf lfifcfiipl sliifsysql lsalravaaq qqesattqka
      241 erevsrmvvv mvgsfcmcyv pyaalamymv nnrehgidlr lvtipaffsk sscvynpiiy
      301 cfmnkqfrac imetvcgrpm sddsevsssa qrtevssvss sqvgps
//
LOCUS       XP_041326187             119 aa            linear   VRT 06-MAY-2021
DEFINITION  V-type proton ATPase subunit F [Pyrgilauda ruficollis].
ACCESSION   XP_041326187
VERSION     XP_041326187.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470253.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..119
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..119
                     /product="V-type proton ATPase subunit F"
                     /calculated_mol_wt=12928
     Region          1..115
                     /region_name="V_ATP_synt_F"
                     /note="vacuolar ATP synthase F subunit; TIGR01101"
                     /db_xref="CDD:130171"
     CDS             1..119
                     /gene="ATP6V1F"
                     /coded_by="XM_041470253.1:198..557"
                     /db_xref="GeneID:121355081"
ORIGIN      
        1 magrgkliav mgdedtvtgf llggigeldk hrrpnflvve ketslaeiee tfrgflared
       61 vgmilisqal aeqirpavaa haralpavle ipskdhpydp ardsvlrrar glfapdelr
//
LOCUS       XP_041326188             322 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355082 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326188
VERSION     XP_041326188.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470254.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..322
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..322
                     /product="uncharacterized protein LOC121355082 isoform X1"
                     /calculated_mol_wt=34874
     Region          33..247
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            39..46
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133324"
     Site            order(41..47,156,210..211,213,237..239)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133324"
     Site            130
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133324"
     Site            134..136
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133324"
     Site            153..156
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133324"
     Site            order(155..156,172..173)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133324"
     Site            210..213
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133324"
     Site            237..239
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133324"
     CDS             1..322
                     /gene="LOC121355082"
                     /coded_by="XM_041470254.1:38..1006"
                     /db_xref="GeneID:121355082"
ORIGIN      
        1 mataaeeqgr aaareeapdg ardeaaagae etvkiiclgd savgkskcvg rgrpagcggg
       61 srgagraaav arltgrvlsp qaagavparw lvslaagrra gsaaggvaar rlwphggsla
      121 rrsqpqqlst faltlyqhra rvggqevrvd fwdtagqerf rsmhasyyhq ahacimvfdv
      181 qrkvtyknln swykelrefr peipcivvan kidadmkvtq rsfnfarkfs lpfyfvsaad
      241 gtnvvkvrwv fgcwawcpre plaaqghggc cghreqemvh hfsstrvagg ygelqraffs
      301 pgmweqcpsa tetqwpcpps ce
//
LOCUS       XP_041326189             300 aa            linear   VRT 06-MAY-2021
DEFINITION  rab-like protein 2A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326189
VERSION     XP_041326189.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470255.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..300
                     /product="rab-like protein 2A isoform X2"
                     /calculated_mol_wt=32390
     Region          33..259
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            39..46
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133324"
     Site            order(41..47,156,210..211,213,237..239)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133324"
     Site            130
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133324"
     Site            134..136
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133324"
     Site            153..156
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133324"
     Site            order(155..156,172..173)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133324"
     Site            210..213
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133324"
     Site            237..239
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133324"
     CDS             1..300
                     /gene="LOC121355082"
                     /coded_by="XM_041470255.1:38..940"
                     /db_xref="GeneID:121355082"
ORIGIN      
        1 mataaeeqgr aaareeapdg ardeaaagae etvkiiclgd savgkskcvg rgrpagcggg
       61 srgagraaav arltgrvlsp qaagavparw lvslaagrra gsaaggvaar rlwphggsla
      121 rrsqpqqlst faltlyqhra rvggqevrvd fwdtagqerf rsmhasyyhq ahacimvfdv
      181 qrkvtyknln swykelrefr peipcivvan kidadmkvtq rsfnfarkfs lpfyfvsaad
      241 gtnvvklfnd airlavaykq hsgdfmdevl relesfdlqn tskdlsdkgk scteeesssa
//
LOCUS       XP_041326190             256 aa            linear   VRT 06-MAY-2021
DEFINITION  rab-like protein 2A isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326190
VERSION     XP_041326190.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470256.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..256
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..256
                     /product="rab-like protein 2A isoform X3"
                     /calculated_mol_wt=28726
     Region          33..181
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            39..46
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133324"
     Site            order(41..47,90,144..145,147,171..173)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133324"
     Site            64
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133324"
     Site            68..70
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133324"
     Site            87..90
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133324"
     Site            order(89..90,106..107)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133324"
     Site            144..147
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133324"
     Site            171..173
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133324"
     CDS             1..256
                     /gene="LOC121355082"
                     /coded_by="XM_041470256.1:38..808"
                     /db_xref="GeneID:121355082"
ORIGIN      
        1 mataaeeqgr aaareeapdg ardeaaagae etvkiiclgd savgksklle rflldgfqpq
       61 qlstfaltly qhrarvggqe vrvdfwdtag qerfrsmhas yyhqahacim vfdvqrkvty
      121 knlnswykel refrpeipci vvankidadm kvtqrsfnfa rkfslpfyfv saadgtnvvk
      181 vrwvfgcwaw cpreplaaqg hggccghreq emvhhfsstr vaggygelqr affspgmweq
      241 cpsatetqwp cppsce
//
LOCUS       XP_041326191             234 aa            linear   VRT 06-MAY-2021
DEFINITION  rab-like protein 2A isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326191
VERSION     XP_041326191.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470257.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..234
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..234
                     /product="rab-like protein 2A isoform X4"
                     /calculated_mol_wt=26242
     Region          33..193
                     /region_name="RabL2"
                     /note="Rab GTPase-like family 2 (Rab-like2); cd04124"
                     /db_xref="CDD:133324"
     Site            33..34
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:133324"
     Site            39..46
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133324"
     Site            order(41..47,57,63..64,90,144..145,147,171..173)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133324"
     Site            order(47..57,62..63)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:133324"
     Site            order(57,62..70)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133324"
     Site            order(62,66..73,80,82)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133324"
     Site            64
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133324"
     Site            order(65,67..69,84,86,93..94,97,101,103..106)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:133324"
     Site            order(65..66,68,86..87,94,96,98..100)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:133324"
     Site            65..69
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:133324"
     Site            82..86
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:133324"
     Site            87..90
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133324"
     Site            order(90,92..102)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133324"
     Site            93..98
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:133324"
     Site            101..105
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:133324"
     Site            110..115
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:133324"
     Site            133..141
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:133324"
     Site            144..147
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133324"
     Site            171..173
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133324"
     Site            187..193
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:133324"
     CDS             1..234
                     /gene="LOC121355082"
                     /coded_by="XM_041470257.1:38..742"
                     /db_xref="GeneID:121355082"
ORIGIN      
        1 mataaeeqgr aaareeapdg ardeaaagae etvkiiclgd savgksklle rflldgfqpq
       61 qlstfaltly qhrarvggqe vrvdfwdtag qerfrsmhas yyhqahacim vfdvqrkvty
      121 knlnswykel refrpeipci vvankidadm kvtqrsfnfa rkfslpfyfv saadgtnvvk
      181 lfndairlav aykqhsgdfm devlrelesf dlqntskdls dkgkscteee sssa
//
LOCUS       XP_041326192             315 aa            linear   VRT 06-MAY-2021
DEFINITION  calumenin [Pyrgilauda ruficollis].
ACCESSION   XP_041326192
VERSION     XP_041326192.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470258.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="calumenin"
                     /calculated_mol_wt=36684
     Region          37..299
                     /region_name="EFh_CREC_Calumenin"
                     /note="EF-hand, calcium binding motif, found in calumenin;
                     cd16228"
                     /db_xref="CDD:320026"
     Region          37..66
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320026"
     Region          72..101
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320026"
     Region          108..137
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320026"
     Region          155..184
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320026"
     Region          192..221
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320026"
     Region          233..262
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320026"
     Region          269..299
                     /region_name="EF-hand motif"
                     /note="EF-hand motif [structural motif]"
                     /db_xref="CDD:320026"
     CDS             1..315
                     /gene="CALU"
                     /coded_by="XM_041470258.1:91..1038"
                     /db_xref="GeneID:121355084"
ORIGIN      
        1 mrfprlllcl gvwalcgsak pterkervvr eaplsarehd daqsfdydhd aflgadeaks
       61 fdqltpeesk erlgkivgki dedgdgfvtv eelkawikfa qkrwiyedve rqwkghdlne
      121 dglvsweeyk natygyildd pdpddgfnyk qmmvrderrf kmadkdgdla atkeeftafl
      181 hpeeynymkd ivvqetmedi dkngdgfidl eeyigdmysq dgdadepewv ktereqfvef
      241 rdknrdgkmd keetkdwilp sdydhaeaea rhlvyesdqd kdgkltreei vdksdlfvgs
      301 qatdfgealv rhdef
//
LOCUS       XP_041326194             313 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355086 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326194
VERSION     XP_041326194.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470260.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="uncharacterized protein LOC121355086 isoform X1"
                     /calculated_mol_wt=32548
     CDS             1..313
                     /gene="LOC121355086"
                     /coded_by="XM_041470260.1:1..942"
                     /db_xref="GeneID:121355086"
ORIGIN      
        1 msaraprnlp cpsrpgsesw aplpsrwsrd lqlrgwqrgq spaaqgmaeg tgpcssgdgr
       61 gdsaehrdhp vptleprpav hrngnagdvg mlqvlapcpw gerghghcsr waggssgcgq
      121 gvpvllgsls wrgqslppgw lsrggtfpag gakccsllga plsppgrwgp dqprdegplw
      181 lkphgagtgl gqrpckchlv sagsplhrsh ptftpsglss lqpphpgcpl calpvpspgg
      241 qllslslslc qprcplaaaa prcwgwlsvl nrllqpprpr tgvnwgfcvg dprghrgvta
      301 aplppgtpqh pqd
//
LOCUS       XP_041326195             313 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355086 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326195
VERSION     XP_041326195.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470261.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="uncharacterized protein LOC121355086 isoform X2"
                     /calculated_mol_wt=32620
     CDS             1..313
                     /gene="LOC121355086"
                     /coded_by="XM_041470261.1:1..942"
                     /db_xref="GeneID:121355086"
ORIGIN      
        1 msaraprnlp cpsrpgsesw aplpsrwsrd lqlrgwqrgq spaaqgmaeg tepcssgdgr
       61 gdsaehrdhp vptleprpav hrngnagdvg mlqvlapcpw gerghghcsr waggssgcgq
      121 gvpvllgsls wrgqslppgw lsrggtfpag gakccsllga plsppgrwgp dqprdegplw
      181 lkphgagtgl gqrpckchlv sagsplhrsh ptftpsglss lqpphpgcpl calpvpspgg
      241 qllslslslc qprcplaaaa prcwgwlsvl nrllqpprpr tgvnwgfcvg dprghrgvta
      301 aplppgtpqh pqd
//
LOCUS       XP_041326196             772 aa            linear   VRT 06-MAY-2021
DEFINITION  carnitine O-palmitoyltransferase 1, muscle isoform [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326196
VERSION     XP_041326196.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470262.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..772
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..772
                     /product="carnitine O-palmitoyltransferase 1, muscle
                     isoform"
                     /calculated_mol_wt=87474
     Region          1..47
                     /region_name="CPT_N"
                     /note="Carnitine O-palmitoyltransferase N-terminus;
                     pfam16484"
                     /db_xref="CDD:465132"
     Region          174..754
                     /region_name="Carn_acyltransf"
                     /note="Choline/Carnitine o-acyltransferase; pfam00755"
                     /db_xref="CDD:459926"
     CDS             1..772
                     /gene="CPT1B"
                     /coded_by="XM_041470262.1:127..2445"
                     /db_xref="GeneID:121355087"
ORIGIN      
        1 maeahqavaf qftvtpegld fhlsreavrq lylaavhswk krlvraknsf ltgvypasps
       61 swmvvvmata gscycqvdps lgliariqhw lprgealtpq aqavvstvvf stgawlaavl
      121 lfrrllrlml syhgwmfeph grmsrrtrlw ialmkimsir kpllysfqss lpklpvppvk
      181 atvarylesv rplldddkyq emaalakefq ektaprlqry lllkswwttn yvsdwweeyi
      241 ylrgrsplmv nsnyyamdfl yvipspiqaa raanvvhsli lyrrrldrge ippmmalgvv
      301 pmcsyqserm fnttripgke tdtllhlads khlavyhkgr yykvwlyygg qllppadlem
      361 qfqrilddps ppqpgeerla altagervpw aeararffsr gpnkaaldai eraaffltld
      421 edehghepar pgcmdayaks llhgrcydrw fdksftlvvy kngkvganae hswadapivg
      481 hlwefmlatd kfqlgytegg hckgdprrql appqrlqwdi ppegvaaiea slrvaralae
      541 dvdfccfpfs tfgkglikrc rtspdafiqi alqlahfrdk gsfcltyeas mtrlfregrt
      601 etvrsctses tafvrsmads rrsrserqql fkaaaekhqq lyrlamtgag idrhlfclyl
      661 msrylgmqsp flakvlaepw rlstsqtpqq qlkmfdfeef pdhvssgggf gpvaddgygv
      721 syiiagenli tfhvsskfss petdsqrfgr nirqamldia alfdkppaaa gk
//
LOCUS       XP_041326197             171 aa            linear   VRT 06-MAY-2021
DEFINITION  choline/ethanolamine kinase, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326197
VERSION     XP_041326197.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470263.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..171
                     /product="choline/ethanolamine kinase"
     Region          <5..168
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     CDS             1..171
                     /gene="CHKB"
                     /coded_by="XM_041470263.1:<1..518"
                     /codon_start=3
                     /db_xref="GeneID:121355088"
ORIGIN      
        1 plsplrdlle atpspvvfch ndvqegnill lagregsser lmlidfeyss ynyrgfdlgn
       61 hfcewvysys herwpcfqaq pehypsrqqq vwgpgvlggs lglwgflfhf ggvcatfgvl
      121 callwgftla shffwglwsv vqakistihf gyldyaqsrf qayfqhkarc s
//
LOCUS       XP_041326198             153 aa            linear   VRT 06-MAY-2021
DEFINITION  protein ADM2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326198
VERSION     XP_041326198.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470264.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..153
                     /product="protein ADM2"
                     /calculated_mol_wt=16844
     Region          <114..153
                     /region_name="Calc_CGRP_IAPP"
                     /note="Calcitonin / CGRP / IAPP family; pfam00214"
                     /db_xref="CDD:459715"
     CDS             1..153
                     /gene="ADM2"
                     /coded_by="XM_041470264.1:80..541"
                     /db_xref="GeneID:121355089"
ORIGIN      
        1 mrapaplalg cvsfalclle lphgrglppr rapparsppe ripalpgdpp apqpigtlrh
       61 rapvprhgpw aaprpppwhv rrlilrhdrr hdprhdpqpp rgrrhagghl vrvgcvlgtc
      121 qvqnlshrlw qlrgqsgrrd sspmnpnsph syg
//
LOCUS       XP_041326199            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  staphylococcal nuclease domain-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326199
VERSION     XP_041326199.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470265.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 26% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="staphylococcal nuclease domain-containing
                     protein 1"
                     /calculated_mol_wt=112399
     Region          8..>194
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <226..331
                     /region_name="SNc"
                     /note="Staphylococcal nuclease homologues. SNase
                     homologues are found in bacteria, archaea, and eukaryotes.
                     They contain no disufide bonds; cd00175"
                     /db_xref="CDD:238102"
     Region          431..585
                     /region_name="SNc"
                     /note="Staphylococcal nuclease homologues; smart00318"
                     /db_xref="CDD:214615"
     Site            order(444,458,464,467,525..526,528)
                     /site_type="other"
                     /note="Catalytic site"
                     /db_xref="CDD:238102"
     Region          615..750
                     /region_name="SNc"
                     /note="Staphylococcal nuclease homologues; smart00318"
                     /db_xref="CDD:214615"
     Site            order(628,643,649,652,693..694,696)
                     /site_type="other"
                     /note="Catalytic site"
                     /db_xref="CDD:238102"
     Region          793..875
                     /region_name="Tudor_TDRD11"
                     /note="Tudor domain found in Tudor domain-containing
                     protein 11 (TDRD11) and similar proteins; cd20433"
                     /db_xref="CDD:410504"
     Site            order(798,830,832,836,853,856,858)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:410504"
     CDS             1..1032
                     /gene="SND1"
                     /coded_by="XM_041470265.1:1..3099"
                     /db_xref="GeneID:121355091"
ORIGIN      
        1 masaanpgqg gsapppvvqr givkmpgiap qpgsprrpga lpqeelwcrc srslpapepr
       61 gapaagpsrg crtcsarcpc rgipgagcps parvpagqrg dgvppslrgp regspsprqg
      121 ptcagsgare searhvptsg rapahppvlq rerareraps rarahpapfl prsrregalg
      181 appgagaapa prsprfrgaa arpgplwgcs pheggagsrg rrgllprpar dprlraplsp
      241 qpwgfparef lrkkligkev cftveyktpq greygmvylg kdtsgeniae slvaeglasr
      301 regirannpe qsrlaeleeq arsakkgmws egsgahtvrd lkytlenprh fvdslhqkpv
      361 naralscspq ngnitelllk egfarcvdws iavytrgadk lraaerfake rklriwrdyv
      421 aptanldqkd kqfvakvmqv lnadaivvkl nsgdhktihl ssirpprleg dsaqdknrkl
      481 rplydipymf eareflrkkl igkkvnvsvd yirpassatd tvpafsertc atvsiggini
      541 aealvskgla tvlryrqddd qrsahydell aaearaikng kglhskkevp ihrvadisgd
      601 tqkakqflpf lqragrseav veyvfsgsrl klflpketcl itfllagiec prgarnvpgl
      661 aqegepfsee atlftkelvm qreveveves mdkagnfigw lhiegvnlsv alveqalsrv
      721 hftaerspyc kallaaqdaa kqrkekvwsh yeetpveevv pvleekerta nykpvfvtei
      781 tddlhfyvqd vetgaqlekl menmraevga hppvegsfvp rrgdfciakf vdgewyrarv
      841 ekvesggkvh ifyidygnke tlppsrlapl ppafsprvlp pqateytfaf iqvpqdeear
      901 adavdsvvrd iqntqcllnv ehlgpgcphv tlqfadsksd vglglvkegl vmveprkerq
      961 fqkvvgaggh sppnpglylk lqrpnkpdpq aaprdlersv pltatvtatv plrsptaagt
     1021 aqgpsasppg pl
//
LOCUS       XP_041326200             942 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase 6 regulatory subunit 2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326200
VERSION     XP_041326200.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470266.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..942
                     /product="serine/threonine-protein phosphatase 6
                     regulatory subunit 2"
                     /calculated_mol_wt=102798
     Region          128..501
                     /region_name="SAPS"
                     /note="SIT4 phosphatase-associated protein; pfam04499"
                     /db_xref="CDD:398279"
     Region          664..>826
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     CDS             1..942
                     /gene="PPP6R2"
                     /coded_by="XM_041470266.1:174..3002"
                     /db_xref="GeneID:121355092"
ORIGIN      
        1 mfwkfdlntt shvdklldke dvtleelmde ddvlqeckaq nrrlldflcq qhcmeqlvtl
       61 itheppvdmd ekvrfkypnt acelltsdvp qindklggde sllnilydfl dhepplnpll
      121 asffsktign liarkteqvi sflrkkdkfl slvlkhidts ammdlllrli scveptalrq
      181 dvlnwlnear iiqrlvelih ssqdedrqsn asqtlcdiir lsrdqstqlq dvpepdpllt
      241 alesveglmd sytqgfersy tvnssilhgi eprlkdfhql llrppkkpai lttlgvleep
      301 lgnarlhgsr liaallhant psinqelcrl gtmdllldlf fkytwnnflh fqvelsiaai
      361 lshsvhegkp spgepgskee apsgsaapep aepaepaepa eppagatenv mvthlfqkcc
      421 lvqrildawe andkiqaegg rrrgnmghlt rianavvhnm ekgpmqaqis dfikelpedc
      481 rgrwesfvee tltetnrrnt vdlvsthhlh sssededies afpneltlqq afseyqiqqm
      541 tanfvdqfgf ndeefadqdd ninapfdria einfnidadd dspnaslfea ccneriqqfd
      601 dneeeediwe ekdisyatqv ksrtrfgasq tsessksdle ngdhdgsvds eeeeerppps
      661 phkgstpeqk dsdscqgagw tavfepagpt ppvamdvgss vwdsaapqss apeekgwakf
      721 tdfqpfccse tnprcsspvg tessgtdgtp aqgqdknsst aaspcvwnac gtrkaplval
      781 dssssgsses ddddddkaka gtestataqe pskdraapss gsdgkaletl paadagtaaa
      841 prgarnsaat htdghqrvat avttatetat rdsgsdgkal etlpaadagt aaaprgarns
      901 aathtdghqr vatavttate tatrdrsdea lpcaeatlng pa
//
LOCUS       XP_041326201             402 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355093 [Pyrgilauda ruficollis].
ACCESSION   XP_041326201
VERSION     XP_041326201.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470267.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..402
                     /product="uncharacterized protein LOC121355093"
                     /calculated_mol_wt=43475
     CDS             1..402
                     /gene="LOC121355093"
                     /coded_by="XM_041470267.1:4134..5342"
                     /db_xref="GeneID:121355093"
ORIGIN      
        1 mvarlslggc gmmeeshcgd gkapwcwerp hpchigcpfp gmspvgapgc ragglgipnp
       61 svcgaviprq meqgagiehs wgsgwgasvp pqsrgiqrrv qsslrvpges sshctlhpgr
      121 aasreysghs lsnstaknfs ktefplflwq aksrvfvgvl cpqqspreip qvsqgfavpg
      181 mesqgfikkl slescrwagn gnpeghrlek kkktkkkqkk kpkkspkspv lpsvsvpkgl
      241 gipvprppse rsgvevqghs qrtylkeisl ellscspvas qsyfshtgqg tvikiliyqw
      301 qslehipvpa lksqplgdps hpegtflphw vgwelihwkk qnllekteli yqknwsvvls
      361 eelkvypgcv lgvtgvypgc ilgvtgvcpv ctqgcilgvs wv
//
LOCUS       XP_041326202            2021 aa            linear   VRT 06-MAY-2021
DEFINITION  myotubularin-related protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326202
VERSION     XP_041326202.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470268.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2021
                     /product="myotubularin-related protein 5"
                     /calculated_mol_wt=225569
     Region          124..209
                     /region_name="uDENN"
                     /note="Domain always found upstream of DENN domain, found
                     in a variety of signalling proteins; smart00800"
                     /db_xref="CDD:214824"
     Region          245..426
                     /region_name="DENN"
                     /note="Domain found in a variety of signalling proteins,
                     always encircled by uDENN and dDENN; smart00799"
                     /db_xref="CDD:214823"
     Region          480..548
                     /region_name="dDENN"
                     /note="Domain always found downstream of DENN domain,
                     found in a variety of signalling proteins; smart00801"
                     /db_xref="CDD:129037"
     Region          654..853
                     /region_name="SBF2"
                     /note="Myotubularin protein; pfam12335"
                     /db_xref="CDD:463536"
     Region          981..1099
                     /region_name="PH-GRAM_MTMR5"
                     /note="Myotubularian (MTM) related 5 protein (MTMR5)
                     Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase
                     activators and Myotubularins (PH-GRAM) domain; cd13340"
                     /db_xref="CDD:275417"
     Region          1238..1648
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          1914..2019
                     /region_name="PH_Sbf1_hMTMR5"
                     /note="Set binding factor 1 (also called Human MTMR5)
                     Pleckstrin Homology (PH) domain; cd01235"
                     /db_xref="CDD:269941"
     CDS             1..2021
                     /gene="SBF1"
                     /coded_by="XM_041470268.1:1..6066"
                     /db_xref="GeneID:121355094"
ORIGIN      
        1 mpglslpgdt egpegpeagr cgrpptphaa hvplprgngn gngngngesp gatpgaalpa
       61 ggprppprdr pgtapaggtg agparaprvs rawhgpapgr ngterdwhgg tagpgrspfp
      121 eerpprlady fvlvgydpgk sgsgdgqgqi lqrfpekdwe dnpfpqgiel fcqpsgwqlf
      181 pernpptffv avltdinser hycacftfwe avespqpqsh arngegeeee eeeasslvqp
      241 aqlfapkslv lvsrldhaev frnslgliyt iyvdglsvsl envignlltc tipitggaqr
      301 tislgagdrq viqtpindsl pvsscsvall frqlgitnvl flfcaalteh kilflsssyq
      361 rltdacrall almfplkysf tyvpilpaql levlstptpf iigvhsifqs etqelldvvi
      421 adldggtvnv pecvhisllp epllqqtrea lsmvldpele vadlafppst isasslkmqd
      481 keiravflrl faqllqgyrw clhiirihpe pvirfhkaaf lgqrgltedd fltkvlegma
      541 fagfvterga pyrpidlfde lvayevkrmk aeegnkqkil rhikelaekl yknenpypav
      601 tmhkvqkpte gchlrlhqkp fprldegtvq wiidqatakl qtappavkae kkcmevvrnc
      661 isyvfenkml eakklfpavl ramkgraarh cltqelhlhv qqnravldhq qfdfvirmmn
      721 cclqdctamd ehgiaaallp lvtafcrkls pgitqfaysc vqehvvwtni qfweamfycd
      781 vqnhiralyl dsaeenhaeq esteepqeak saleiaseql rlwptmsrek qqeliqkees
      841 tvfsqaihya nrmsylllpl dtsknrllrs sglgdvesvs nsfvtnsiag svaesydtes
      901 gfedaessdv ansvvrfinr fvdkvctesg vtnehlkglh vmipdivqmh ietldavhre
      961 skrlppiqkp kllrpnlllg eecvmeglrv ylmpdgreeg aggsiggppl lpaegavflt
     1021 tyriifkgtp tdplvgeqvv irsfpiaslt kekkisiqaq adqfiqeglq lrsctfqllk
     1081 iafdeevasd saeifrkhlh klrypqhvrg tfaftvgqsp kqamqpkake knpslrtlsk
     1141 nlvknakrti grqyvtrkky tppaweqrgs qhfpednede isvseeldrs tltpsstmrp
     1201 sekmtmthvv eraccrdyqr lglgtlsssl trsknepfri stvnrmyaic rsypgllivp
     1261 qsiqdntiqr isrcyrqsrf pvvcwrnsrt kavllrsggl hgkgvvglfk sqnaptpgps
     1321 qadstsleqe kylqavinsm physdaggrn tlsgftsahm ssadfsdkrq qpklgslmkq
     1381 vmggkdegpg tlsrgglghr arvitlsspk caspkgretp rgkwgsiras grmssyalnv
     1441 eigsrlagkd llgtqhngtp aepsflrqhr aslyiigdks glgrgcpgsg vkpdplqhwe
     1501 vvpievfdvr qvkasfkklm kacvpgcpss dpsvaylrsl eesewlsqih kilqisvlvv
     1561 elldtgssvl vsledgwdit tqvvslvqll sdpyyrtleg frllvekewl sfghrfshrg
     1621 aqtlagqssg fapiflqfld cvhqihlqfp mefefsqyyl kflsyhyisn rfrtflldsd
     1681 yerielglly eekgerkgqq vsksiwdyid rlnkkapiff nylyapedge vlrpysnisn
     1741 lkvwdyytee tlsegppydw elaqgqpepa eepdrqdtaa pqskrriiwp cydnrsrvep
     1801 daisklleel hnlemelgqv perwkdtwdk vkasqrtegr qegnrtpssl lmssglshhr
     1861 rslgvylqes gvgstlnlsl dsdtsststp ssgkpggrrs tstlysqfqm sesenrsyeg
     1921 slykkgafmk pwksrwfvld ktkhqlryyd srmdteckgv idlaevesit pgtptmgapk
     1981 tvdekaffdl kttkrvynfc aqdvqlaqqw idriqsclsd a
//
LOCUS       XP_041326203             305 aa            linear   VRT 06-MAY-2021
DEFINITION  inositol oxygenase [Pyrgilauda ruficollis].
ACCESSION   XP_041326203
VERSION     XP_041326203.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470269.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="inositol oxygenase"
                     /calculated_mol_wt=35067
     Region          58..305
                     /region_name="MIOX"
                     /note="Myo-inositol oxygenase; pfam05153"
                     /db_xref="CDD:461562"
     CDS             1..305
                     /gene="MIOX"
                     /coded_by="XM_041470269.1:1..918"
                     /db_xref="GeneID:121355095"
ORIGIN      
        1 mgplshsgpc plslspsrga hagplsprpp qdpdsseepk pgkaktelrn ytegrlidrv
       61 yntyllmhth qtvefvrrks aqygpcsqrr msvmealqll drlvdesdpd vdfpnsfhaf
      121 qtaegirrah pdkdwfhlvg llhdlgkvlv lfgepqwavv gdtfpvgckv qksvvygdst
      181 fhdnpdtkdp rysteygmyq pgcgldnvlm swghdeymyq vmkfnnfalp keafymvrfh
      241 sfypwhahgd yghlcseedr rmlpwlreln kfdlytkqee lpdvqqlray yqglidkycp
      301 gqlcw
//
LOCUS       XP_041326204             476 aa            linear   VRT 06-MAY-2021
DEFINITION  lipase maturation factor 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326204
VERSION     XP_041326204.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470270.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="lipase maturation factor 2"
                     /calculated_mol_wt=53289
     Region          23..362
                     /region_name="LMF1"
                     /note="Lipase maturation factor; pfam06762"
                     /db_xref="CDD:462004"
     CDS             1..476
                     /gene="LMF2"
                     /coded_by="XM_041470270.1:1..1431"
                     /db_xref="GeneID:121355096"
ORIGIN      
        1 mpggtgvpvl pvevlevrvq pggltaltyh yesqciptpg awlahqlpvw fqklsvvaty
       61 vievavpvlf faplrrlrlf afycqvllqv liiltgnynf fnvltivlaf slldeehvgr
      121 wlgrprkrhg sgwppslgsv lgtllelsty glllcwtvrc fglqldwdrr lldskvafty
      181 hefttwlrtv tlplvgvafl slsweilvam yrcacvrgcf wklwatlqwa imatatvslf
      241 avslvpftyi ehesngklwp gihqmfgave rfqvvnsygl frrmtgvggr pevilegsyd
      301 ghswtpavir lvqtdesryp fhgrpptflr aqlykywfta pnegspgaap wwrrqhvqef
      361 fpavslgdpt lesllsqhgl kdkppslrra aavlprllgw vrrlcqpvsg pallwslylv
      421 aatagllral arrarggqap arhkgarern gargtegarg tegarpegrh ankrkk
//
LOCUS       XP_041326205             323 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SCO2 homolog, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041326205
VERSION     XP_041326205.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470271.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="protein SCO2 homolog, mitochondrial"
                     /calculated_mol_wt=36484
     Region          154..295
                     /region_name="SCO"
                     /note="SCO (an acronym for Synthesis of Cytochrome c
                     Oxidase) family; composed of proteins similar to Sco1, a
                     membrane-anchored protein possessing a soluble domain with
                     a TRX fold. Members of this family are required for the
                     proper assembly of cytochrome c...; cd02968"
                     /db_xref="CDD:239266"
     Site            order(186,190,277)
                     /site_type="other"
                     /note="Cu(I) binding site [ion binding]"
                     /db_xref="CDD:239266"
     CDS             1..323
                     /gene="LOC121355097"
                     /coded_by="XM_041470271.1:1..972"
                     /db_xref="GeneID:121355097"
ORIGIN      
        1 msgpcrdspp hdsegcgagr wrhlvveegs vlwprpwhwp rpsrfgrtpp tlyahstdha
       61 lsrsghapfl rgpapcryfr frrqrrgrsg rdrrrtgrgd rerskvsgdc tprlrgrgrl
      121 ggaaaagwly lrqqkerqqr srrlrqlrrl algqgdfqlr dstgaarska dflgrwvlly
      181 fgfthcpdvc peqlerlsra vrllerdpal pplqplfvtv dperddeaal arylrdfhpr
      241 llgltgtpeq vraaaaafrv yvsagprdad gdyvvdhsvl tflvdpdglf rdcygssrta
      301 eemarsvkgh mdnyeplppe ggq
//
LOCUS       XP_041326206             464 aa            linear   VRT 06-MAY-2021
DEFINITION  thymidine phosphorylase [Pyrgilauda ruficollis].
ACCESSION   XP_041326206
VERSION     XP_041326206.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470272.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..464
                     /product="thymidine phosphorylase"
                     /calculated_mol_wt=48526
     Region          10..432
                     /region_name="DeoA"
                     /note="Thymidine phosphorylase [Nucleotide transport and
                     metabolism]; COG0213"
                     /db_xref="CDD:439983"
     CDS             1..464
                     /gene="LOC121355099"
                     /coded_by="XM_041470272.1:1..1395"
                     /db_xref="GeneID:121355099"
ORIGIN      
        1 mdaltplptl irkkrdgerl edaeirsfvr gvtegtaqqg qigamlmair lrgmdagetl
       61 altqamassg rtlawppawh glvvdkhstg gvgdkvslal apalaacgck vpmisghglg
      121 htggtldkle aipgfrvsqs peemqhilar vgccivgqsa elvsadrvly glrdvtatvd
      181 slplitasil skkaaerlsa lvldvkfgea alyptqesar elaqslvevg ahlgirtaal
      241 ltrmeqplgr avgnalevle aleclegggp pdlrhlvtal ggvllwqcgm aagaeqgrer
      301 laralddgsa lgtfeamlga qgvppdtarg lcagtpaqrr qllgeakvce elpapqegwv
      361 qqvralplar vlhrlgagrs ragdpvnprv gaellvgtgq hlragepwlr vhhegtlsae
      421 grrqlqdalc lgpepprdpp plvaetivps galpgragth nkpq
//
LOCUS       XP_041326207             331 aa            linear   VRT 06-MAY-2021
DEFINITION  thymidine phosphorylase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326207
VERSION     XP_041326207.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470273.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..331
                     /product="thymidine phosphorylase-like"
                     /calculated_mol_wt=34033
     Region          10..>281
                     /region_name="DeoA"
                     /note="Thymidine phosphorylase [Nucleotide transport and
                     metabolism]; COG0213"
                     /db_xref="CDD:439983"
     CDS             1..331
                     /gene="LOC121355100"
                     /coded_by="XM_041470273.1:1..996"
                     /db_xref="GeneID:121355100"
ORIGIN      
        1 mdaltplpal irkkrdgerl edaeirsfvr gvtegtaqqg qigamlmair lrgmdagetl
       61 altqamassg rtlawppawh glvvdkhstg gvgdkvslal apalaacgck vpmisghglg
      121 htggtldkle aipgfrvsqs peemqhilar vgccivgqsa elvsadrvly glrdvtatvd
      181 slplitasil skkaaerlsa lvldvkfgea alyptqesar elaqslvevg ahlgirtaal
      241 ltrmeqplgr avgnalevle aleclegggp pdlrqlvtal gqcgdtgghg ggqggggppd
      301 lrqlvtalgq cgdtgghrag qvcrhgscvq s
//
LOCUS       XP_041326208             259 aa            linear   VRT 06-MAY-2021
DEFINITION  outer dense fiber protein 3B [Pyrgilauda ruficollis].
ACCESSION   XP_041326208
VERSION     XP_041326208.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470274.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 33% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..259
                     /product="outer dense fiber protein 3B"
                     /calculated_mol_wt=27970
     CDS             1..259
                     /gene="ODF3B"
                     /coded_by="XM_041470274.1:1..780"
                     /db_xref="GeneID:121355101"
ORIGIN      
        1 msndfwvgpw rphrlrgpts aaypspgpky riasstgkdq rdpsgrrapa ysfgmklggp
       61 eeprspgpqy lvpagftarg rergpaftmg grprerqasn tpgpayyspe qanrvtlpsa
      121 pacsmrsrgr pdkpqqtpgp atyqlppvvg prlvnktstp qyimtgrgps ifddnkqgpg
      181 dwdprtqqir hrghqlvhga gpplhhsgad plapdlqhtq pqrllpqagp ekrtdlwcap
      241 lgkrgphdgl apvgnwghg
//
LOCUS       XP_041326210             574 aa            linear   VRT 06-MAY-2021
DEFINITION  protein DENND6B [Pyrgilauda ruficollis].
ACCESSION   XP_041326210
VERSION     XP_041326210.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470276.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..574
                     /product="protein DENND6B"
                     /calculated_mol_wt=65856
     Region          31..>166
                     /region_name="Avl9"
                     /note="Transport protein Avl9; pfam09794"
                     /db_xref="CDD:430832"
     Region          140..>300
                     /region_name="DENN"
                     /note="DENN (AEX-3) domain; cl11519"
                     /db_xref="CDD:472208"
     Region          239..342
                     /region_name="SPA"
                     /note="Stabilization of polarity axis; cl40631"
                     /db_xref="CDD:454797"
     CDS             1..574
                     /gene="DENND6B"
                     /coded_by="XM_041470276.1:8..1732"
                     /db_xref="GeneID:121355102"
ORIGIN      
        1 mdalsragpr prraaaaass plpwgrfaaw idcvcvvtfd lelgqamelv yphdfrltek
       61 ektsicylsf pdsysgglgd tqfsfrlrqa ggsrsspfqd dgrynreapl tlqreaahyf
      121 gyvyfrqvkd ssmrrgyfqk slvlvsrlpy vnlfqcllql iapeyfdkle pcleavcnei
      181 dqwpppvpgq tlnlpvmgvv iqvripsrvd kpgsspvkqc nqenllpapl vlpsvheldl
      241 frcfqpvlih iqmlwelmll gepmvvmaps ptmssemvla ltsclaplry ccdfrpyfti
      301 hdsefkeytt rtqappnivv gvtnpffikt lqhwphilrv gelrmsgdlp kqvkvkklak
      361 lktldtkpgi ytsyktflhk dktlikrllk giqrkrpsev qsallrrhll eltqsfiipl
      421 ehymaslmpl qraitpwknp pqirpfcqed fmkslehagp qltcvlkgdw lglyrrffks
      481 pnfdgwfrqr hremtqklea lhleaicead ivawmkdkse veivdlvlkl reklvrarcq
      541 hlpvkeetlq rvalyidtii gslpedlqtv lhhp
//
LOCUS       XP_041326211             172 aa            linear   VRT 06-MAY-2021
DEFINITION  dromaiocalcin-1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326211
VERSION     XP_041326211.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470277.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..172
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..172
                     /product="dromaiocalcin-1-like"
                     /calculated_mol_wt=19348
     Region          29..170
                     /region_name="CLECT"
                     /note="C-type lectin (CTL)/C-type lectin-like (CTLD)
                     domain; cl02432"
                     /db_xref="CDD:470576"
     Site            order(141,145,147,154,156..159,162..164)
                     /site_type="other"
                     /note="ligand binding surface [chemical binding]"
                     /db_xref="CDD:153057"
     CDS             1..172
                     /gene="LOC121355103"
                     /coded_by="XM_041470277.1:426..944"
                     /db_xref="GeneID:121355103"
ORIGIN      
        1 mgpaaflglc llgclvlpps lpgaqatrcp rgwlsfeghc ygyfgqqlsw rraeawcqat
       61 rgghlaslhs peehralaaf iarrprrged deegekerer erdkeesvwi glhrrrqgwl
      121 wadgsprhyw awegddgpkg hpcialedsa gfmawegeac gerkpfvcky ea
//
LOCUS       XP_041326212             563 aa            linear   VRT 06-MAY-2021
DEFINITION  hematopoietic lineage cell-specific protein-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326212
VERSION     XP_041326212.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470278.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..563
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..563
                     /product="hematopoietic lineage cell-specific protein-like
                     isoform X1"
                     /calculated_mol_wt=62052
     Region          121..156
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          158..193
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          195..230
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          232..267
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          269..>290
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          <321..473
                     /region_name="PHA03321"
                     /note="tegument protein VP11/12; Provisional"
                     /db_xref="CDD:223041"
     Region          508..562
                     /region_name="SH3_HS1"
                     /note="Src homology 3 domain of Hematopoietic lineage
                     cell-specific protein 1; cd12073"
                     /db_xref="CDD:213006"
     Site            order(514,516,519,522..523,541..542,553,555,557..558)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213006"
     CDS             1..563
                     /gene="LOC121355104"
                     /coded_by="XM_041470278.1:6..1697"
                     /db_xref="GeneID:121355104"
ORIGIN      
        1 mrckepvqvp spradqptpd nescikasae ekqrrvqsqm wkavvghnvs vkveaqgddw
       61 dtdpdfvndi sereqrwgak tiegsgragh idihqlrnkv seehevikkk eletgpkasy
      121 gyggkfgter drmdkcavgh eyvadvgkhs sqtdaaqgfg gkfgvqrdra dksalgfeyk
      181 sevekhssqk dyskgfggry gverdkvdka avgfdyksqa ekhdsqkdys vgfggkfgvq
      241 rdrqdknalg wdhqeevqph asqrdyakgf ggrygvqkdr vdksaagfde maaptssyek
      301 trpleagass gtsslrlrfe hmaqsaeees rrqaeeervr rqarehrlap qqqeipprek
      361 ehtgtgaapp ampaevlrga agdqpvspge qeakrddeev pptlpprpad ldaelckvps
      421 qgqptysvsl dvggdyeelp epsdyydsts ggadyeelpa plekldatyd fggdggedye
      481 vilpqeprqs hphlgstdsa aegqspgica valydyqgdg ddeisfdpdd tithiemvde
      541 gwwrgqchgr vglfpanyvk llq
//
LOCUS       XP_041326213             562 aa            linear   VRT 06-MAY-2021
DEFINITION  hematopoietic lineage cell-specific protein-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326213
VERSION     XP_041326213.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470279.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..562
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..562
                     /product="hematopoietic lineage cell-specific protein-like
                     isoform X2"
                     /calculated_mol_wt=61924
     Region          121..156
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          158..193
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          195..230
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          232..267
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          269..>290
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          <321..472
                     /region_name="PHA03321"
                     /note="tegument protein VP11/12; Provisional"
                     /db_xref="CDD:223041"
     Region          507..561
                     /region_name="SH3_HS1"
                     /note="Src homology 3 domain of Hematopoietic lineage
                     cell-specific protein 1; cd12073"
                     /db_xref="CDD:213006"
     Site            order(513,515,518,521..522,540..541,552,554,556..557)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213006"
     CDS             1..562
                     /gene="LOC121355104"
                     /coded_by="XM_041470279.1:6..1694"
                     /db_xref="GeneID:121355104"
ORIGIN      
        1 mrckepvqvp spradqptpd nescikasae ekqrrvqsqm wkavvghnvs vkveaqgddw
       61 dtdpdfvndi sereqrwgak tiegsgragh idihqlrnkv seehevikkk eletgpkasy
      121 gyggkfgter drmdkcavgh eyvadvgkhs sqtdaaqgfg gkfgvqrdra dksalgfeyk
      181 sevekhssqk dyskgfggry gverdkvdka avgfdyksqa ekhdsqkdys vgfggkfgvq
      241 rdrqdknalg wdhqeevqph asqrdyakgf ggrygvqkdr vdksaagfde maaptssyek
      301 trpleagass gtsslrlrfe hmaqsaeees rrqaeeervr rqarehrlap qqeippreke
      361 htgtgaappa mpaevlrgaa gdqpvspgeq eakrddeevp ptlpprpadl daelckvpsq
      421 gqptysvsld vggdyeelpe psdyydstsg gadyeelpap lekldatydf ggdggedyev
      481 ilpqeprqsh phlgstdsaa egqspgicav alydyqgdgd deisfdpddt ithiemvdeg
      541 wwrgqchgrv glfpanyvkl lq
//
LOCUS       XP_041326214             524 aa            linear   VRT 06-MAY-2021
DEFINITION  hematopoietic lineage cell-specific protein-like isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326214
VERSION     XP_041326214.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470280.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..524
                     /product="hematopoietic lineage cell-specific protein-like
                     isoform X3"
                     /calculated_mol_wt=57645
     Region          82..117
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          119..154
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          156..191
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          193..228
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          230..>251
                     /region_name="HS1_rep"
                     /note="Repeat in HS1/Cortactin; pfam02218"
                     /db_xref="CDD:460497"
     Region          <282..434
                     /region_name="PHA03321"
                     /note="tegument protein VP11/12; Provisional"
                     /db_xref="CDD:223041"
     Region          469..523
                     /region_name="SH3_HS1"
                     /note="Src homology 3 domain of Hematopoietic lineage
                     cell-specific protein 1; cd12073"
                     /db_xref="CDD:213006"
     Site            order(475,477,480,483..484,502..503,514,516,518..519)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:213006"
     CDS             1..524
                     /gene="LOC121355104"
                     /coded_by="XM_041470280.1:55..1629"
                     /db_xref="GeneID:121355104"
ORIGIN      
        1 mwkavvghnv svkveaqgdd wdtdpdfvnd isereqrwga ktiegsgrag hidihqlrnk
       61 vseehevikk keletgpkas ygyggkfgte rdrmdkcavg heyvadvgkh ssqtdaaqgf
      121 ggkfgvqrdr adksalgfey ksevekhssq kdyskgfggr ygverdkvdk aavgfdyksq
      181 aekhdsqkdy svgfggkfgv qrdrqdknal gwdhqeevqp hasqrdyakg fggrygvqkd
      241 rvdksaagfd emaaptssye ktrpleagas sgtsslrlrf ehmaqsaeee srrqaeeerv
      301 rrqarehrla pqqqeippre kehtgtgaap pampaevlrg aagdqpvspg eqeakrddee
      361 vpptlpprpa dldaelckvp sqgqptysvs ldvggdyeel pepsdyydst sggadyeelp
      421 aplekldaty dfggdggedy evilpqeprq shphlgstds aaegqspgic avalydyqgd
      481 gddeisfdpd dtithiemvd egwwrgqchg rvglfpanyv kllq
//
LOCUS       XP_041326215             315 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 5V1-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326215
VERSION     XP_041326215.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470281.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="olfactory receptor 5V1-like"
                     /calculated_mol_wt=33907
     Region          22..298
                     /region_name="7tmA_OR5V1-like"
                     /note="olfactory receptor subfamily 5V1 and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15231"
                     /db_xref="CDD:320359"
     Region          23..49
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320359"
     Region          56..82
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320359"
     Site            order(78,81..82,94..99,101..102,105,150,152..156,192,
                     195..197,199..201,203..204,249,252..253,255..256,259,
                     265..266,268..270,273,276..277)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320359"
     Region          94..124
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320359"
     Region          137..158
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320359"
     Region          192..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320359"
     Region          229..259
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320359"
     Region          266..291
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320359"
     CDS             1..315
                     /gene="LOC121355105"
                     /coded_by="XM_041470281.1:688..1635"
                     /db_xref="GeneID:121355105"
ORIGIN      
        1 magtnqtqvt efvllgfshg rpflfalfla iylatllgns ailslvsldp hlhspmyffl
       61 shlscldlcy ssvtvpkila nalrpqatis yagclaqmfl lmwcagaeca llalmaydrf
      121 aavcqplrys qalrrstcaa aaagcwlwgl ldsavhtlla arlsfcgvar lqhifcdvpp
      181 llgatcsdph pnelalhiss ifvglspfll vvisylcila tvlgmplats rrkafstcsa
      241 hlivvtlyfv aanlnynrps sgyspaadtl vsvlyciiip mlnplvyslr nqevwaalrk
      301 avrvsatrgs pgnna
//
LOCUS       XP_041326216             751 aa            linear   VRT 06-MAY-2021
DEFINITION  GRIP and coiled-coil domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326216
VERSION     XP_041326216.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470282.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..751
                     /product="GRIP and coiled-coil domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=83945
     Region          <60..>142
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <140..>588
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          693..733
                     /region_name="GRIP"
                     /note="GRIP domain; pfam01465"
                     /db_xref="CDD:460221"
     CDS             1..751
                     /gene="GCC1"
                     /coded_by="XM_041470282.1:39..2294"
                     /db_xref="GeneID:121355106"
ORIGIN      
        1 mekfgmsfgg gpsrkellet ietqkqqllr fqarlkdvvr ayksllkeke aleaslkvls
       61 vshhgdlapp ppaagdspde rssehsedsa gtaasadtaa gvsgargdee drpaagghpq
      121 raeepsgpeg gelsaggepe rrlqqlkaql gtltgalatv tqeksrmeas yqaerrqmkq
      181 eleeaaarar aeagrlqeql aqtrgrlaaq qrerereqgd hglmlrelqe llraerdarh
      241 aaerelhecr ealaggaaer aqgheqharq lsleleelrr elqgvreesg kadprvqelq
      301 eemaglknhf qlqlvqemkk taqaeeqlrq rsqreeqrva eleaqvsqvs ellgtyekak
      361 qrdqgtiqrl kdrivqldle nktlaiaass rslgevavee atldvsalke kmeklrkllq
      421 aaagkgpagp eaeepreper epepspgggd gngdkapggh cqqelrqlke eferykvraq
      481 qvlkskatkd vglakeleea reqlaelqdk hvllqlatdd mekqhrrele agkqelfqlq
      541 qlhrqelerc qlefreralr leeemhkqrd ralavlaekd releqlralt lphgpqscrd
      601 ggpgdapgqd sseilpqalq lssgseptff lyaeqlarke veiaalrkhk hqlevqlhql
      661 qgralaeedk hreevaalrg eiqkscrdks reganleylk nvvyrfltlp dargrqqtlt
      721 ailailhfsp eeklsiakss ahgswwlhgk r
//
LOCUS       XP_041326217             751 aa            linear   VRT 06-MAY-2021
DEFINITION  GRIP and coiled-coil domain-containing protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326217
VERSION     XP_041326217.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470283.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..751
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..751
                     /product="GRIP and coiled-coil domain-containing protein 1
                     isoform X1"
                     /calculated_mol_wt=83945
     Region          <60..>142
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <140..>588
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          693..733
                     /region_name="GRIP"
                     /note="GRIP domain; pfam01465"
                     /db_xref="CDD:460221"
     CDS             1..751
                     /gene="GCC1"
                     /coded_by="XM_041470283.1:59..2314"
                     /db_xref="GeneID:121355106"
ORIGIN      
        1 mekfgmsfgg gpsrkellet ietqkqqllr fqarlkdvvr ayksllkeke aleaslkvls
       61 vshhgdlapp ppaagdspde rssehsedsa gtaasadtaa gvsgargdee drpaagghpq
      121 raeepsgpeg gelsaggepe rrlqqlkaql gtltgalatv tqeksrmeas yqaerrqmkq
      181 eleeaaarar aeagrlqeql aqtrgrlaaq qrerereqgd hglmlrelqe llraerdarh
      241 aaerelhecr ealaggaaer aqgheqharq lsleleelrr elqgvreesg kadprvqelq
      301 eemaglknhf qlqlvqemkk taqaeeqlrq rsqreeqrva eleaqvsqvs ellgtyekak
      361 qrdqgtiqrl kdrivqldle nktlaiaass rslgevavee atldvsalke kmeklrkllq
      421 aaagkgpagp eaeepreper epepspgggd gngdkapggh cqqelrqlke eferykvraq
      481 qvlkskatkd vglakeleea reqlaelqdk hvllqlatdd mekqhrrele agkqelfqlq
      541 qlhrqelerc qlefreralr leeemhkqrd ralavlaekd releqlralt lphgpqscrd
      601 ggpgdapgqd sseilpqalq lssgseptff lyaeqlarke veiaalrkhk hqlevqlhql
      661 qgralaeedk hreevaalrg eiqkscrdks reganleylk nvvyrfltlp dargrqqtlt
      721 ailailhfsp eeklsiakss ahgswwlhgk r
//
LOCUS       XP_041326219             797 aa            linear   VRT 06-MAY-2021
DEFINITION  GRIP and coiled-coil domain-containing protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326219
VERSION     XP_041326219.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470285.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..797
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..797
                     /product="GRIP and coiled-coil domain-containing protein 1
                     isoform X2"
                     /calculated_mol_wt=88955
     Region          <106..>188
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <186..>634
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          739..779
                     /region_name="GRIP"
                     /note="GRIP domain; pfam01465"
                     /db_xref="CDD:460221"
     CDS             1..797
                     /gene="GCC1"
                     /coded_by="XM_041470285.1:26..2419"
                     /db_xref="GeneID:121355106"
ORIGIN      
        1 mavpgrarpg wclcrslpvw cpagrramll ampkvpfvla llppramekf gmsfgggpsr
       61 kelletietq kqqllrfqar lkdvvrayks llkekealea slkvlsvshh gdlappppaa
      121 gdspdersse hsedsagtaa sadtaagvsg argdeedrpa agghpqraee psgpeggels
      181 aggeperrlq qlkaqlgtlt galatvtqek srmeasyqae rrqmkqelee aaararaeag
      241 rlqeqlaqtr grlaaqqrer ereqgdhglm lrelqellra erdarhaaer elhecreala
      301 ggaaeraqgh eqharqlsle leelrrelqg vreesgkadp rvqelqeema glknhfqlql
      361 vqemkktaqa eeqlrqrsqr eeqrvaelea qvsqvsellg tyekakqrdq gtiqrlkdri
      421 vqldlenktl aiaassrslg evaveeatld vsalkekmek lrkllqaaag kgpagpeaee
      481 preperepep spgggdgngd kapgghcqqe lrqlkeefer ykvraqqvlk skatkdvgla
      541 keleeareql aelqdkhvll qlatddmekq hrreleagkq elfqlqqlhr qelercqlef
      601 reralrleee mhkqrdrala vlaekdrele qlraltlphg pqscrdggpg dapgqdssei
      661 lpqalqlssg septfflyae qlarkeveia alrkhkhqle vqlhqlqgra laeedkhree
      721 vaalrgeiqk scrdksrega nleylknvvy rfltlpdarg rqqtltaila ilhfspeekl
      781 siakssahgs wwlhgkr
//
LOCUS       XP_041326220             585 aa            linear   VRT 06-MAY-2021
DEFINITION  condensin-2 complex subunit H2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326220
VERSION     XP_041326220.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470286.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..585
                     /product="condensin-2 complex subunit H2 isoform X1"
                     /calculated_mol_wt=66198
     Region          6..122
                     /region_name="CNDH2_N"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2,
                     N-terminal; pfam06278"
                     /db_xref="CDD:461866"
     Region          145..253
                     /region_name="CNDH2_M"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2, mid
                     domain; pfam16869"
                     /db_xref="CDD:435617"
     Region          297..563
                     /region_name="CNDH2_C"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2,
                     C-term; pfam16858"
                     /db_xref="CDD:465283"
     CDS             1..585
                     /gene="NCAPH2"
                     /coded_by="XM_041470286.1:135..1892"
                     /db_xref="GeneID:121355107"
ORIGIN      
        1 meevdsrflh llqpirdltk nwevdvaaql geyleeldqi cisfdngrtt mnfmeaalli
       61 qgsaciysrk veylymlvcq tldciskkkk eklptslgpd grdadatftd keeeflsldd
      121 ipetsqasvd mrrdqqpaav nivpltpmsl vppeegekke npllsrrgev lasrrdfrmn
      181 tstphacgaf llelaglspt hpqqeqclgt ataapgsspa erpssgtala ralsfceeag
      241 pedddvpgal eddmevtpvp kehivaqrst prtrgyvlre rppspdpkal skeepnpwqs
      301 ldpfgdseek pfrkgrpfqv phglddvigg krkrrgprkl qdftrwfsaa ynnvterqks
      361 rrrgptfadl evlywrhfke rlaarrklqs rgvllresep eleqergads eegedddfve
      421 hedmepeape eleeenldpp epgyeelvrr nvelfmassq kfaqetelsq rirqweerme
      481 pllqeqesrv afdvraygqq ltercaelgq whslaslvag qppfevcryl laslqlande
      541 evelaqepgl eaaldtarlr lisarpaher fqqlqlpsqr dpgpq
//
LOCUS       XP_041326221             558 aa            linear   VRT 06-MAY-2021
DEFINITION  condensin-2 complex subunit H2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326221
VERSION     XP_041326221.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470287.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..558
                     /product="condensin-2 complex subunit H2 isoform X2"
                     /calculated_mol_wt=63582
     Region          6..122
                     /region_name="CNDH2_N"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2,
                     N-terminal; pfam06278"
                     /db_xref="CDD:461866"
     Region          145..237
                     /region_name="CNDH2_M"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2, mid
                     domain; pfam16869"
                     /db_xref="CDD:435617"
     Region          270..536
                     /region_name="CNDH2_C"
                     /note="Condensin II complex subunit CAP-H2 or CNDH2,
                     C-term; pfam16858"
                     /db_xref="CDD:465283"
     CDS             1..558
                     /gene="NCAPH2"
                     /coded_by="XM_041470287.1:135..1811"
                     /db_xref="GeneID:121355107"
ORIGIN      
        1 meevdsrflh llqpirdltk nwevdvaaql geyleeldqi cisfdngrtt mnfmeaalli
       61 qgsaciysrk veylymlvcq tldciskkkk eklptslgpd grdadatftd keeeflsldd
      121 ipetsqasvd mrrdqqpaav nivpltpmsl vppeegekke npllsrrgev lasrrdfrmn
      181 tstphacgaf llelaglspt hpqqeqclgt atgpedddvp galeddmevt pvpkehivaq
      241 rstprtrgyv lrerppspdp kalskeepnp wqsldpfgds eekpfrkgrp fqvphglddv
      301 iggkrkrrgp rklqdftrwf saaynnvter qksrrrgptf adlevlywrh fkerlaarrk
      361 lqsrgvllre sepeleqerg adseegeddd fvehedmepe apeeleeenl dppepgyeel
      421 vrrnvelfma ssqkfaqete lsqrirqwee rmepllqeqe srvafdvray gqqltercae
      481 lgqwhslasl vagqppfevc ryllaslqla ndeevelaqe pgleaaldta rlrlisarpa
      541 herfqqlqlp sqrdpgpq
//
LOCUS       XP_041326222            3268 aa            linear   VRT 06-MAY-2021
DEFINITION  golgin subfamily B member 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326222
VERSION     XP_041326222.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470288.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3268
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3268
                     /product="golgin subfamily B member 1 isoform X1"
                     /calculated_mol_wt=376046
     Region          123..>447
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          803..1636
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1584..2225
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          2001..2815
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2526..>3191
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..3268
                     /gene="GOLGB1"
                     /coded_by="XM_041470288.1:1606..11412"
                     /db_xref="GeneID:121355108"
ORIGIN      
        1 maprqllrrd clavtsifhp pqligisapg agprrrrkwr rrvpvlrwrg gavrrqllgg
       61 lepplgadpp ppccrlkmls rlsglastvl qelsgedrda vtepsiavea lqseaesmee
      121 apeellerla qteqlvvqlk dlirekdall qeketvfkke reaadaklmk lklqakakla
      181 slnkrveelt ekgsplptqk yentseghre evevlkkqlr eqeetiqdln kqlavakvnl
      241 kdaeikyatq lsslqeviqe kealleeyvh qhqaellktv vqsdmevemq qnlrtlqrkl
      301 eeqeaallgr tqvvellqqe lhtaekqnqt lldqcqkmev elssmrdvld aerrgsqdlr
      361 ekmelelaer klsshrlqee mqclseqlee arraqaelev kykhleqehr leveeknhll
      421 grltvaeeel rcgralrgae keqdvgqlpv psvghgaaah gprdelqkfe efvccqdelk
      481 sqpqvqlsel kqqdesasse kivdqedqne tsenlerqkt eeiphmqlvl resqqeavmv
      541 tedaeqnkni gaeaklqdlw tveapasyvd cssstgvsge lvnsevqkpf vdtsmlsear
      601 tdgftnrstq fteescppgi layiaaekqk elsvlllelk eaqeeitflk sqlkgpsgqt
      661 ctgsqteanq leensqiqcl ereeqkasdt qsasllrdte mqqicflqen gisfqeepqg
      721 spgtsqsqel idlqnqitel qiilqksees frkelgekca einrlnqvae eyrkkgedpd
      781 stfcvlteeq dqllcqakel stitelkeqv kqleeelals ekqrlsdsqs sllreqiqsl
      841 knefkskdik iealqkdlde aqlqlsdqdm qlkdlrsqve kkecevldlg qllrkntaei
      901 qelshkltlk gheaagleql vaehtrsies lqqalqekdq qmaeisvsms ekmvllneek
      961 fslgnelksl keqtslllka qeekeqniga kdtclkcgvs kqqnetdtvs kendklvnqv
     1021 ellrkendqv krklqavlvn rkellkkvar leneleqlsg eqksetsvaq aaageedvrs
     1081 misketglen qpredyliql lsekeselqs irkekettea rleavieemr qslqgkanta
     1141 svkdeimehq titdkvtgtn espeddegnk khssagtnle ekqksalker isvleqekeq
     1201 lqkklqeali srkdtikkaq ekdrhhreql kqqkddynil qeqfdqqske kdsiqaqlrq
     1261 lqeqkgsaes vfrsqgrlns scmeaedttn nkpvqvadis eeewkkhldn lqtekeklec
     1321 nvshmqrela hkselifdlq qhiaqlfvei eglkrtsdqa eamgaslqte leetvgkisg
     1381 vasledlkvl vhqkdeeief lnqqlkeksd tlsnvqaqll ekeesvqrlc sqleaqaqvh
     1441 eeqskrlqte mleiqekqed naeaakqknq mqrklqaali srkealkesk slkeelanak
     1501 itidnlsvkl tnmesqicgh vkekdtltek laclsgeqen ltaeidkllr enqnldgcck
     1561 nltltldrvv lekeklekev eslksfqate ssewqekyke lqgeyetllq syenvsneae
     1621 riqrvletvr qekqeifiql kgaeakkqet dkqlqeaeqe idemkekmrk fakskqkkil
     1681 eleeeneklr aemhftdgel hrtgesftnt slkedlecsr rdcqslstql etvvaekesl
     1741 nqeivdlkcl lqvtesklke srelvdryva qqtageennk avattspkee senqvdlsfr
     1801 peppaaeleq eafesdrpce dpglyrqqia eltkriteme dnrraseqql gdirrcvetl
     1861 agekralehq mgekvhevnd lqatvakmeq mvqearddli rmtalkdale aekddleerl
     1921 mnqlaelngs ignyqqdatd fqikndqlkh elqslqrmmy eleeeksqma kekskassek
     1981 qkefveklky nwrgessthi kelqellkqk qqeikqlqkd ciksqeknss lertvkalef
     2041 lqsetqkeve aaketsakaa edtkkaqael shcrvvlddt qseaarvlae sikvkeelqa
     2101 nkeqmkiqmk kkdedferrl eqekdkhske iknmeakvaa lqrekdhmet tvgdlqdslk
     2161 tkdqeakqle gslnktlaql aaftrsmssl qddrdrvide sktwekkfte tiqkkeeeir
     2221 skeeacivle dqvkhmtmrv eelqthisrl ecnkkdwead crkeiqhhqk tcemlqeekk
     2281 elltrlegsq elysksqneq qeleseissl rdqladlqns ltkcelaree lgtvvkqqet
     2341 siqnfklnce qleadlqask dltnklheet sakdqkimnl lsakeeavma alaelqqqhs
     2401 eemkelecrl rkeednkkal eneknkfldk lnhltekmki sreeskqqka qldsftksms
     2461 slqddrdril rdykqleerh lviilekdql iqeaaaennk lkeemrsfhs qmddlnsena
     2521 klnaelmryr edlnqvisik dsqqkqllki qlqriqtlen ekatietqlk esdhiqddlr
     2581 kcmealredk vsmsqeietl tsslsrvqse maalhegspi vecqaelkar ekevqqlshe
     2641 lslfqkrire lerelecvqr daakrvgeae drlrkelkhl hhdagimrne tetaeervae
     2701 lardlmemeq kllevtdenk dlraqiqsfg rsmsslqdsr dqaneelhil kqkysadlee
     2761 qkslvqnlqk qmaqlqeeqh stvrdrdtvr seltelqkai dergllaqie elsqqlrakd
     2821 dellhlslel egssnqiksf skamaslqnd rdrllneldk trkieevkqq aegsisttas
     2881 evqslkkala slqsdrdrvv relenlqqqy ilvgveaaen srlkaqlqqw eqeadkqlrl
     2941 qeqlrqegvv yqqelqqlrq ekttwekqss smkeqylmai aekdkqlshl qritqemrlp
     3001 fsrsqtieeq hqskispevl kgdfssleae mkhlqaqlsd slkelhqkel riqqlnskls
     3061 qvfeeknals lqlrgssrst ceshqhysev lnrclvlerq lqelqaadks melfatdaap
     3121 gapqeknesq rgtytpelqe lqlrlseteh lhsstkqdmk yleeqleeer drrlaaeeal
     3181 faaqdqirrl qssewsssls anidmtpghe qsllidsmdn npsrtrstpg lrrllrslfr
     3241 srarlpllva tyllalhvll flcftghl
//
LOCUS       XP_041326223            3191 aa            linear   VRT 06-MAY-2021
DEFINITION  golgin subfamily B member 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326223
VERSION     XP_041326223.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470289.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3191
                     /product="golgin subfamily B member 1 isoform X2"
                     /calculated_mol_wt=367415
     Region          46..>370
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          726..1559
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1507..2148
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          1924..2738
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2449..>3114
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..3191
                     /gene="GOLGB1"
                     /coded_by="XM_041470289.1:268..9843"
                     /db_xref="GeneID:121355108"
ORIGIN      
        1 mlsrlsglas tvlqelsged rdavtepsia vealqseaes meeapeelle rlaqteqlvv
       61 qlkdlirekd allqeketvf kkereaadak lmklklqaka klaslnkrve eltekgsplp
      121 tqkyentseg hreevevlkk qlreqeetiq dlnkqlavak vnlkdaeiky atqlsslqev
      181 iqekeallee yvhqhqaell ktvvqsdmev emqqnlrtlq rkleeqeaal lgrtqvvell
      241 qqelhtaekq nqtlldqcqk mevelssmrd vldaerrgsq dlrekmelel aerklsshrl
      301 qeemqclseq leearraqae levkykhleq ehrleveekn hllgrltvae eelrcgralr
      361 gaekeqdvgq lpvpsvghga aahgprdelq kfeefvccqd elksqpqvql selkqqdesa
      421 ssekivdqed qnetsenler qkteeiphmq lvlresqqea vmvtedaeqn knigaeaklq
      481 dlwtveapas yvdcssstgv sgelvnsevq kpfvdtsmls eartdgftnr stqfteescp
      541 pgilayiaae kqkelsvlll elkeaqeeit flksqlkgps gqtctgsqte anqleensqi
      601 qclereeqka sdtqsasllr dtemqqicfl qengisfqee pqgspgtsqs qelidlqnqi
      661 telqiilqks eesfrkelge kcaeinrlnq vaeeyrkkge dpdstfcvlt eeqdqllcqa
      721 kelstitelk eqvkqleeel alsekqrlsd sqssllreqi qslknefksk dikiealqkd
      781 ldeaqlqlsd qdmqlkdlrs qvekkecevl dlgqllrknt aeiqelshkl tlkgheaagl
      841 eqlvaehtrs ieslqqalqe kdqqmaeisv smsekmvlln eekfslgnel kslkeqtsll
      901 lkaqeekeqn igakdtclkc gvskqqnetd tvskendklv nqvellrken dqvkrklqav
      961 lvnrkellkk varleneleq lsgeqksets vaqaaageed vrsmisketg lenqpredyl
     1021 iqllsekese lqsirkeket tearleavie emrqslqgka ntasvkdeim ehqtitdkvt
     1081 gtnespedde gnkkhssagt nleekqksal kerisvleqe keqlqkklqe alisrkdtik
     1141 kaqekdrhhr eqlkqqkddy nilqeqfdqq skekdsiqaq lrqlqeqkgs aesvfrsqgr
     1201 lnsscmeaed ttnnkpvqva diseeewkkh ldnlqtekek lecnvshmqr elahkselif
     1261 dlqqhiaqlf veieglkrts dqaeamgasl qteleetvgk isgvasledl kvlvhqkdee
     1321 ieflnqqlke ksdtlsnvqa qllekeesvq rlcsqleaqa qvheeqskrl qtemleiqek
     1381 qednaeaakq knqmqrklqa alisrkealk eskslkeela nakitidnls vkltnmesqi
     1441 cghvkekdtl teklaclsge qenltaeidk llrenqnldg ccknltltld rvvlekekle
     1501 keveslksfq atessewqek ykelqgeyet llqsyenvsn eaeriqrvle tvrqekqeif
     1561 iqlkgaeakk qetdkqlqea eqeidemkek mrkfakskqk kileleeene klraemhftd
     1621 gelhrtgesf tntslkedle csrrdcqsls tqletvvaek eslnqeivdl kcllqvtesk
     1681 lkesrelvdr yvaqqtagee nnkavattsp keesenqvdl sfrpeppaae leqeafesdr
     1741 pcedpglyrq qiaeltkrit emednrrase qqlgdirrcv etlagekral ehqmgekvhe
     1801 vndlqatvak meqmvqeard dlirmtalkd aleaekddle erlmnqlael ngsignyqqd
     1861 atdfqikndq lkhelqslqr mmyeleeeks qmakekskas sekqkefvek lkynwrgess
     1921 thikelqell kqkqqeikql qkdciksqek nsslertvka leflqsetqk eveaaketsa
     1981 kaaedtkkaq aelshcrvvl ddtqseaarv laesikvkee lqankeqmki qmkkkdedfe
     2041 rrleqekdkh skeiknmeak vaalqrekdh mettvgdlqd slktkdqeak qlegslnktl
     2101 aqlaaftrsm sslqddrdrv idesktwekk ftetiqkkee eirskeeaci vledqvkhmt
     2161 mrveelqthi srlecnkkdw eadcrkeiqh hqktcemlqe ekkelltrle gsqelysksq
     2221 neqqelesei sslrdqladl qnsltkcela reelgtvvkq qetsiqnfkl nceqleadlq
     2281 askdltnklh eetsakdqki mnllsakeea vmaalaelqq qhseemkele crlrkeednk
     2341 kaleneknkf ldklnhltek mkisreeskq qkaqldsftk smsslqddrd rilrdykqle
     2401 erhlviilek dqliqeaaae nnklkeemrs fhsqmddlns enaklnaelm ryredlnqvi
     2461 sikdsqqkql lkiqlqriqt lenekatiet qlkesdhiqd dlrkcmealr edkvsmsqei
     2521 etltsslsrv qsemaalheg spivecqael karekevqql shelslfqkr irelerelec
     2581 vqrdaakrvg eaedrlrkel khlhhdagim rnetetaeer vaelardlme meqkllevtd
     2641 enkdlraqiq sfgrsmsslq dsrdqaneel hilkqkysad leeqkslvqn lqkqmaqlqe
     2701 eqhstvrdrd tvrseltelq kaiderglla qieelsqqlr akddellhls lelegssnqi
     2761 ksfskamasl qndrdrllne ldktrkieev kqqaegsist tasevqslkk alaslqsdrd
     2821 rvvrelenlq qqyilvgvea aensrlkaql qqweqeadkq lrlqeqlrqe gvvyqqelqq
     2881 lrqekttwek qsssmkeqyl maiaekdkql shlqritqem rlpfsrsqti eeqhqskisp
     2941 evlkgdfssl eaemkhlqaq lsdslkelhq kelriqqlns klsqvfeekn alslqlrgss
     3001 rstceshqhy sevlnrclvl erqlqelqaa dksmelfatd aapgapqekn esqrgtytpe
     3061 lqelqlrlse tehlhsstkq dmkyleeqle eerdrrlaae ealfaaqdqi rrlqssewss
     3121 slsanidmtp gheqsllids mdnnpsrtrs tpglrrllrs lfrsrarlpl lvatyllalh
     3181 vllflcftgh l
//
LOCUS       XP_041326224            3176 aa            linear   VRT 06-MAY-2021
DEFINITION  golgin subfamily B member 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326224
VERSION     XP_041326224.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470290.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3176
                     /product="golgin subfamily B member 1 isoform X3"
                     /calculated_mol_wt=365620
     Region          119..944
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          711..1544
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1492..2133
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          1909..2723
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2434..>3099
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..3176
                     /gene="GOLGB1"
                     /coded_by="XM_041470290.1:1606..11136"
                     /db_xref="GeneID:121355108"
ORIGIN      
        1 maprqllrrd clavtsifhp pqligisapg agprrrrkwr rrvpvlrwrg gavrrqllgg
       61 lepplgadpp ppccrlkmls rlsglastvl qelsgedrda vtepsiakye ntseghreev
      121 evlkkqlreq eetiqdlnkq lavakvnlkd aeikyatqls slqeviqeke alleeyvhqh
      181 qaellktvvq sdmevemqqn lrtlqrklee qeaallgrtq vvellqqelh taekqnqtll
      241 dqcqkmevel ssmrdvldae rrgsqdlrek melelaerkl sshrlqeemq clseqleear
      301 raqaelevky khleqehrle veeknhllgr ltvaeeelrc gralrgaeke qdvgqlpvps
      361 vghgaaahgp rdelqkfeef vccqdelksq pqvqlselkq qdesasseki vdqedqnets
      421 enlerqktee iphmqlvlre sqqeavmvte daeqnkniga eaklqdlwtv eapasyvdcs
      481 sstgvsgelv nsevqkpfvd tsmlseartd gftnrstqft eescppgila yiaaekqkel
      541 svlllelkea qeeitflksq lkgpsgqtct gsqteanqle ensqiqcler eeqkasdtqs
      601 asllrdtemq qicflqengi sfqeepqgsp gtsqsqelid lqnqitelqi ilqkseesfr
      661 kelgekcaei nrlnqvaeey rkkgedpdst fcvlteeqdq llcqakelst itelkeqvkq
      721 leeelalsek qrlsdsqssl lreqiqslkn efkskdikie alqkdldeaq lqlsdqdmql
      781 kdlrsqvekk ecevldlgql lrkntaeiqe lshkltlkgh eaagleqlva ehtrsieslq
      841 qalqekdqqm aeisvsmsek mvllneekfs lgnelkslke qtslllkaqe ekeqnigakd
      901 tclkcgvskq qnetdtvske ndklvnqvel lrkendqvkr klqavlvnrk ellkkvarle
      961 neleqlsgeq ksetsvaqaa ageedvrsmi sketglenqp redyliqlls ekeselqsir
     1021 kekettearl eavieemrqs lqgkantasv kdeimehqti tdkvtgtnes peddegnkkh
     1081 ssagtnleek qksalkeris vleqekeqlq kklqealisr kdtikkaqek drhhreqlkq
     1141 qkddynilqe qfdqqskekd siqaqlrqlq eqkgsaesvf rsqgrlnssc meaedttnnk
     1201 pvqvadisee ewkkhldnlq tekeklecnv shmqrelahk selifdlqqh iaqlfveieg
     1261 lkrtsdqaea mgaslqtele etvgkisgva sledlkvlvh qkdeeiefln qqlkeksdtl
     1321 snvqaqllek eesvqrlcsq leaqaqvhee qskrlqteml eiqekqedna eaakqknqmq
     1381 rklqaalisr kealkesksl keelanakit idnlsvkltn mesqicghvk ekdtltekla
     1441 clsgeqenlt aeidkllren qnldgccknl tltldrvvle keklekeves lksfqatess
     1501 ewqekykelq geyetllqsy envsneaeri qrvletvrqe kqeifiqlkg aeakkqetdk
     1561 qlqeaeqeid emkekmrkfa kskqkkilel eeeneklrae mhftdgelhr tgesftntsl
     1621 kedlecsrrd cqslstqlet vvaekeslnq eivdlkcllq vtesklkesr elvdryvaqq
     1681 tageennkav attspkeese nqvdlsfrpe ppaaeleqea fesdrpcedp glyrqqiael
     1741 tkritemedn rraseqqlgd irrcvetlag ekralehqmg ekvhevndlq atvakmeqmv
     1801 qearddlirm talkdaleae kddleerlmn qlaelngsig nyqqdatdfq ikndqlkhel
     1861 qslqrmmyel eeeksqmake kskassekqk efveklkynw rgessthike lqellkqkqq
     1921 eikqlqkdci ksqeknssle rtvkaleflq setqkeveaa ketsakaaed tkkaqaelsh
     1981 crvvlddtqs eaarvlaesi kvkeelqank eqmkiqmkkk dedferrleq ekdkhskeik
     2041 nmeakvaalq rekdhmettv gdlqdslktk dqeakqlegs lnktlaqlaa ftrsmsslqd
     2101 drdrvidesk twekkfteti qkkeeeirsk eeacivledq vkhmtmrvee lqthisrlec
     2161 nkkdweadcr keiqhhqktc emlqeekkel ltrlegsqel ysksqneqqe leseisslrd
     2221 qladlqnslt kcelareelg tvvkqqetsi qnfklnceql eadlqaskdl tnklheetsa
     2281 kdqkimnlls akeeavmaal aelqqqhsee mkelecrlrk eednkkalen eknkfldkln
     2341 hltekmkisr eeskqqkaql dsftksmssl qddrdrilrd ykqleerhlv iilekdqliq
     2401 eaaaennklk eemrsfhsqm ddlnsenakl naelmryred lnqvisikds qqkqllkiql
     2461 qriqtlenek atietqlkes dhiqddlrkc mealredkvs msqeietlts slsrvqsema
     2521 alhegspive cqaelkarek evqqlshels lfqkrirele relecvqrda akrvgeaedr
     2581 lrkelkhlhh dagimrnete taeervaela rdlmemeqkl levtdenkdl raqiqsfgrs
     2641 msslqdsrdq aneelhilkq kysadleeqk slvqnlqkqm aqlqeeqhst vrdrdtvrse
     2701 ltelqkaide rgllaqieel sqqlrakdde llhlsleleg ssnqiksfsk amaslqndrd
     2761 rllneldktr kieevkqqae gsisttasev qslkkalasl qsdrdrvvre lenlqqqyil
     2821 vgveaaensr lkaqlqqweq eadkqlrlqe qlrqegvvyq qelqqlrqek ttwekqsssm
     2881 keqylmaiae kdkqlshlqr itqemrlpfs rsqtieeqhq skispevlkg dfssleaemk
     2941 hlqaqlsdsl kelhqkelri qqlnsklsqv feeknalslq lrgssrstce shqhysevln
     3001 rclvlerqlq elqaadksme lfatdaapga pqeknesqrg tytpelqelq lrlsetehlh
     3061 sstkqdmkyl eeqleeerdr rlaaeealfa aqdqirrlqs sewssslsan idmtpgheqs
     3121 llidsmdnnp srtrstpglr rllrslfrsr arlpllvaty llalhvllfl cftghl
//
LOCUS       XP_041326225            3151 aa            linear   VRT 06-MAY-2021
DEFINITION  golgin subfamily B member 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326225
VERSION     XP_041326225.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470291.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3151
                     /product="golgin subfamily B member 1 isoform X4"
                     /calculated_mol_wt=363242
     Region          6..>330
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          686..1519
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1467..2108
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          1884..2698
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2409..>3074
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..3151
                     /gene="GOLGB1"
                     /coded_by="XM_041470291.1:164..9619"
                     /db_xref="GeneID:121355108"
ORIGIN      
        1 meeapeelle rlaqteqlvv qlkdlirekd allqeketvf kkereaadak lmklklqaka
       61 klaslnkrve eltekgsplp tqkyentseg hreevevlkk qlreqeetiq dlnkqlavak
      121 vnlkdaeiky atqlsslqev iqekeallee yvhqhqaell ktvvqsdmev emqqnlrtlq
      181 rkleeqeaal lgrtqvvell qqelhtaekq nqtlldqcqk mevelssmrd vldaerrgsq
      241 dlrekmelel aerklsshrl qeemqclseq leearraqae levkykhleq ehrleveekn
      301 hllgrltvae eelrcgralr gaekeqdvgq lpvpsvghga aahgprdelq kfeefvccqd
      361 elksqpqvql selkqqdesa ssekivdqed qnetsenler qkteeiphmq lvlresqqea
      421 vmvtedaeqn knigaeaklq dlwtveapas yvdcssstgv sgelvnsevq kpfvdtsmls
      481 eartdgftnr stqfteescp pgilayiaae kqkelsvlll elkeaqeeit flksqlkgps
      541 gqtctgsqte anqleensqi qclereeqka sdtqsasllr dtemqqicfl qengisfqee
      601 pqgspgtsqs qelidlqnqi telqiilqks eesfrkelge kcaeinrlnq vaeeyrkkge
      661 dpdstfcvlt eeqdqllcqa kelstitelk eqvkqleeel alsekqrlsd sqssllreqi
      721 qslknefksk dikiealqkd ldeaqlqlsd qdmqlkdlrs qvekkecevl dlgqllrknt
      781 aeiqelshkl tlkgheaagl eqlvaehtrs ieslqqalqe kdqqmaeisv smsekmvlln
      841 eekfslgnel kslkeqtsll lkaqeekeqn igakdtclkc gvskqqnetd tvskendklv
      901 nqvellrken dqvkrklqav lvnrkellkk varleneleq lsgeqksets vaqaaageed
      961 vrsmisketg lenqpredyl iqllsekese lqsirkeket tearleavie emrqslqgka
     1021 ntasvkdeim ehqtitdkvt gtnespedde gnkkhssagt nleekqksal kerisvleqe
     1081 keqlqkklqe alisrkdtik kaqekdrhhr eqlkqqkddy nilqeqfdqq skekdsiqaq
     1141 lrqlqeqkgs aesvfrsqgr lnsscmeaed ttnnkpvqva diseeewkkh ldnlqtekek
     1201 lecnvshmqr elahkselif dlqqhiaqlf veieglkrts dqaeamgasl qteleetvgk
     1261 isgvasledl kvlvhqkdee ieflnqqlke ksdtlsnvqa qllekeesvq rlcsqleaqa
     1321 qvheeqskrl qtemleiqek qednaeaakq knqmqrklqa alisrkealk eskslkeela
     1381 nakitidnls vkltnmesqi cghvkekdtl teklaclsge qenltaeidk llrenqnldg
     1441 ccknltltld rvvlekekle keveslksfq atessewqek ykelqgeyet llqsyenvsn
     1501 eaeriqrvle tvrqekqeif iqlkgaeakk qetdkqlqea eqeidemkek mrkfakskqk
     1561 kileleeene klraemhftd gelhrtgesf tntslkedle csrrdcqsls tqletvvaek
     1621 eslnqeivdl kcllqvtesk lkesrelvdr yvaqqtagee nnkavattsp keesenqvdl
     1681 sfrpeppaae leqeafesdr pcedpglyrq qiaeltkrit emednrrase qqlgdirrcv
     1741 etlagekral ehqmgekvhe vndlqatvak meqmvqeard dlirmtalkd aleaekddle
     1801 erlmnqlael ngsignyqqd atdfqikndq lkhelqslqr mmyeleeeks qmakekskas
     1861 sekqkefvek lkynwrgess thikelqell kqkqqeikql qkdciksqek nsslertvka
     1921 leflqsetqk eveaaketsa kaaedtkkaq aelshcrvvl ddtqseaarv laesikvkee
     1981 lqankeqmki qmkkkdedfe rrleqekdkh skeiknmeak vaalqrekdh mettvgdlqd
     2041 slktkdqeak qlegslnktl aqlaaftrsm sslqddrdrv idesktwekk ftetiqkkee
     2101 eirskeeaci vledqvkhmt mrveelqthi srlecnkkdw eadcrkeiqh hqktcemlqe
     2161 ekkelltrle gsqelysksq neqqelesei sslrdqladl qnsltkcela reelgtvvkq
     2221 qetsiqnfkl nceqleadlq askdltnklh eetsakdqki mnllsakeea vmaalaelqq
     2281 qhseemkele crlrkeednk kaleneknkf ldklnhltek mkisreeskq qkaqldsftk
     2341 smsslqddrd rilrdykqle erhlviilek dqliqeaaae nnklkeemrs fhsqmddlns
     2401 enaklnaelm ryredlnqvi sikdsqqkql lkiqlqriqt lenekatiet qlkesdhiqd
     2461 dlrkcmealr edkvsmsqei etltsslsrv qsemaalheg spivecqael karekevqql
     2521 shelslfqkr irelerelec vqrdaakrvg eaedrlrkel khlhhdagim rnetetaeer
     2581 vaelardlme meqkllevtd enkdlraqiq sfgrsmsslq dsrdqaneel hilkqkysad
     2641 leeqkslvqn lqkqmaqlqe eqhstvrdrd tvrseltelq kaiderglla qieelsqqlr
     2701 akddellhls lelegssnqi ksfskamasl qndrdrllne ldktrkieev kqqaegsist
     2761 tasevqslkk alaslqsdrd rvvrelenlq qqyilvgvea aensrlkaql qqweqeadkq
     2821 lrlqeqlrqe gvvyqqelqq lrqekttwek qsssmkeqyl maiaekdkql shlqritqem
     2881 rlpfsrsqti eeqhqskisp evlkgdfssl eaemkhlqaq lsdslkelhq kelriqqlns
     2941 klsqvfeekn alslqlrgss rstceshqhy sevlnrclvl erqlqelqaa dksmelfatd
     3001 aapgapqekn esqrgtytpe lqelqlrlse tehlhsstkq dmkyleeqle eerdrrlaae
     3061 ealfaaqdqi rrlqssewss slsanidmtp gheqsllids mdnnpsrtrs tpglrrllrs
     3121 lfrsrarlpl lvatyllalh vllflcftgh l
//
LOCUS       XP_041326226            2984 aa            linear   VRT 06-MAY-2021
DEFINITION  golgin subfamily B member 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326226
VERSION     XP_041326226.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470292.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2984
                     /product="golgin subfamily B member 1 isoform X5"
                     /calculated_mol_wt=343829
     Region          <5..>275
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          519..1352
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1300..1941
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          1717..2531
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2242..>2907
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..2984
                     /gene="GOLGB1"
                     /coded_by="XM_041470292.1:52..9006"
                     /db_xref="GeneID:121355108"
ORIGIN      
        1 malslsqnlr tlqrkleeqe aallgrtqvv ellqqelhta ekqnqtlldq cqkmevelss
       61 mrdvldaerr gsqdlrekme lelaerklss hrlqeemqcl seqleearra qaelevkykh
      121 leqehrleve eknhllgrlt vaeeelrcgr alrgaekeqd vgqlpvpsvg hgaaahgprd
      181 elqkfeefvc cqdelksqpq vqlselkqqd esassekivd qedqnetsen lerqkteeip
      241 hmqlvlresq qeavmvteda eqnknigaea klqdlwtvea pasyvdcsss tgvsgelvns
      301 evqkpfvdts mlseartdgf tnrstqftee scppgilayi aaekqkelsv lllelkeaqe
      361 eitflksqlk gpsgqtctgs qteanqleen sqiqcleree qkasdtqsas llrdtemqqi
      421 cflqengisf qeepqgspgt sqsqelidlq nqitelqiil qkseesfrke lgekcaeinr
      481 lnqvaeeyrk kgedpdstfc vlteeqdqll cqakelstit elkeqvkqle eelalsekqr
      541 lsdsqssllr eqiqslknef kskdikieal qkdldeaqlq lsdqdmqlkd lrsqvekkec
      601 evldlgqllr kntaeiqels hkltlkghea agleqlvaeh trsieslqqa lqekdqqmae
      661 isvsmsekmv llneekfslg nelkslkeqt slllkaqeek eqnigakdtc lkcgvskqqn
      721 etdtvskend klvnqvellr kendqvkrkl qavlvnrkel lkkvarlene leqlsgeqks
      781 etsvaqaaag eedvrsmisk etglenqpre dyliqllsek eselqsirke kettearlea
      841 vieemrqslq gkantasvkd eimehqtitd kvtgtnespe ddegnkkhss agtnleekqk
      901 salkerisvl eqekeqlqkk lqealisrkd tikkaqekdr hhreqlkqqk ddynilqeqf
      961 dqqskekdsi qaqlrqlqeq kgsaesvfrs qgrlnsscme aedttnnkpv qvadiseeew
     1021 kkhldnlqte keklecnvsh mqrelahkse lifdlqqhia qlfveieglk rtsdqaeamg
     1081 aslqteleet vgkisgvasl edlkvlvhqk deeieflnqq lkeksdtlsn vqaqllekee
     1141 svqrlcsqle aqaqvheeqs krlqtemlei qekqednaea akqknqmqrk lqaalisrke
     1201 alkeskslke elanakitid nlsvkltnme sqicghvkek dtlteklacl sgeqenltae
     1261 idkllrenqn ldgccknltl tldrvvleke klekeveslk sfqatessew qekykelqge
     1321 yetllqsyen vsneaeriqr vletvrqekq eifiqlkgae akkqetdkql qeaeqeidem
     1381 kekmrkfaks kqkkilelee eneklraemh ftdgelhrtg esftntslke dlecsrrdcq
     1441 slstqletvv aekeslnqei vdlkcllqvt esklkesrel vdryvaqqta geennkavat
     1501 tspkeesenq vdlsfrpepp aaeleqeafe sdrpcedpgl yrqqiaeltk ritemednrr
     1561 aseqqlgdir rcvetlagek ralehqmgek vhevndlqat vakmeqmvqe arddlirmta
     1621 lkdaleaekd dleerlmnql aelngsigny qqdatdfqik ndqlkhelqs lqrmmyelee
     1681 eksqmakeks kassekqkef veklkynwrg essthikelq ellkqkqqei kqlqkdciks
     1741 qeknsslert vkaleflqse tqkeveaake tsakaaedtk kaqaelshcr vvlddtqsea
     1801 arvlaesikv keelqankeq mkiqmkkkde dferrleqek dkhskeiknm eakvaalqre
     1861 kdhmettvgd lqdslktkdq eakqlegsln ktlaqlaaft rsmsslqddr drvidesktw
     1921 ekkftetiqk keeeirskee acivledqvk hmtmrveelq thisrlecnk kdweadcrke
     1981 iqhhqktcem lqeekkellt rlegsqelys ksqneqqele seisslrdql adlqnsltkc
     2041 elareelgtv vkqqetsiqn fklnceqlea dlqaskdltn klheetsakd qkimnllsak
     2101 eeavmaalae lqqqhseemk elecrlrkee dnkkalenek nkfldklnhl tekmkisree
     2161 skqqkaqlds ftksmsslqd drdrilrdyk qleerhlvii lekdqliqea aaennklkee
     2221 mrsfhsqmdd lnsenaklna elmryredln qvisikdsqq kqllkiqlqr iqtlenekat
     2281 ietqlkesdh iqddlrkcme alredkvsms qeietltssl srvqsemaal hegspivecq
     2341 aelkarekev qqlshelslf qkrirelere lecvqrdaak rvgeaedrlr kelkhlhhda
     2401 gimrneteta eervaelard lmemeqklle vtdenkdlra qiqsfgrsms slqdsrdqan
     2461 eelhilkqky sadleeqksl vqnlqkqmaq lqeeqhstvr drdtvrselt elqkaiderg
     2521 llaqieelsq qlrakddell hlslelegss nqiksfskam aslqndrdrl lneldktrki
     2581 eevkqqaegs isttasevqs lkkalaslqs drdrvvrele nlqqqyilvg veaaensrlk
     2641 aqlqqweqea dkqlrlqeql rqegvvyqqe lqqlrqektt wekqsssmke qylmaiaekd
     2701 kqlshlqrit qemrlpfsrs qtieeqhqsk ispevlkgdf ssleaemkhl qaqlsdslke
     2761 lhqkelriqq lnsklsqvfe eknalslqlr gssrstcesh qhysevlnrc lvlerqlqel
     2821 qaadksmelf atdaapgapq eknesqrgty tpelqelqlr lsetehlhss tkqdmkylee
     2881 qleeerdrrl aaeealfaaq dqirrlqsse wssslsanid mtpgheqsll idsmdnnpsr
     2941 trstpglrrl lrslfrsrar lpllvatyll alhvllflcf tghl
//
LOCUS       XP_041326227            2984 aa            linear   VRT 06-MAY-2021
DEFINITION  golgin subfamily B member 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326227
VERSION     XP_041326227.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470293.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2984
                     /product="golgin subfamily B member 1 isoform X6"
                     /calculated_mol_wt=343829
     Region          <5..>275
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     Region          519..1352
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          <1300..1941
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          1717..2531
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     Region          2242..>2907
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..2984
                     /gene="GOLGB1"
                     /coded_by="XM_041470293.1:112..9066"
                     /db_xref="GeneID:121355108"
ORIGIN      
        1 malslsqnlr tlqrkleeqe aallgrtqvv ellqqelhta ekqnqtlldq cqkmevelss
       61 mrdvldaerr gsqdlrekme lelaerklss hrlqeemqcl seqleearra qaelevkykh
      121 leqehrleve eknhllgrlt vaeeelrcgr alrgaekeqd vgqlpvpsvg hgaaahgprd
      181 elqkfeefvc cqdelksqpq vqlselkqqd esassekivd qedqnetsen lerqkteeip
      241 hmqlvlresq qeavmvteda eqnknigaea klqdlwtvea pasyvdcsss tgvsgelvns
      301 evqkpfvdts mlseartdgf tnrstqftee scppgilayi aaekqkelsv lllelkeaqe
      361 eitflksqlk gpsgqtctgs qteanqleen sqiqcleree qkasdtqsas llrdtemqqi
      421 cflqengisf qeepqgspgt sqsqelidlq nqitelqiil qkseesfrke lgekcaeinr
      481 lnqvaeeyrk kgedpdstfc vlteeqdqll cqakelstit elkeqvkqle eelalsekqr
      541 lsdsqssllr eqiqslknef kskdikieal qkdldeaqlq lsdqdmqlkd lrsqvekkec
      601 evldlgqllr kntaeiqels hkltlkghea agleqlvaeh trsieslqqa lqekdqqmae
      661 isvsmsekmv llneekfslg nelkslkeqt slllkaqeek eqnigakdtc lkcgvskqqn
      721 etdtvskend klvnqvellr kendqvkrkl qavlvnrkel lkkvarlene leqlsgeqks
      781 etsvaqaaag eedvrsmisk etglenqpre dyliqllsek eselqsirke kettearlea
      841 vieemrqslq gkantasvkd eimehqtitd kvtgtnespe ddegnkkhss agtnleekqk
      901 salkerisvl eqekeqlqkk lqealisrkd tikkaqekdr hhreqlkqqk ddynilqeqf
      961 dqqskekdsi qaqlrqlqeq kgsaesvfrs qgrlnsscme aedttnnkpv qvadiseeew
     1021 kkhldnlqte keklecnvsh mqrelahkse lifdlqqhia qlfveieglk rtsdqaeamg
     1081 aslqteleet vgkisgvasl edlkvlvhqk deeieflnqq lkeksdtlsn vqaqllekee
     1141 svqrlcsqle aqaqvheeqs krlqtemlei qekqednaea akqknqmqrk lqaalisrke
     1201 alkeskslke elanakitid nlsvkltnme sqicghvkek dtlteklacl sgeqenltae
     1261 idkllrenqn ldgccknltl tldrvvleke klekeveslk sfqatessew qekykelqge
     1321 yetllqsyen vsneaeriqr vletvrqekq eifiqlkgae akkqetdkql qeaeqeidem
     1381 kekmrkfaks kqkkilelee eneklraemh ftdgelhrtg esftntslke dlecsrrdcq
     1441 slstqletvv aekeslnqei vdlkcllqvt esklkesrel vdryvaqqta geennkavat
     1501 tspkeesenq vdlsfrpepp aaeleqeafe sdrpcedpgl yrqqiaeltk ritemednrr
     1561 aseqqlgdir rcvetlagek ralehqmgek vhevndlqat vakmeqmvqe arddlirmta
     1621 lkdaleaekd dleerlmnql aelngsigny qqdatdfqik ndqlkhelqs lqrmmyelee
     1681 eksqmakeks kassekqkef veklkynwrg essthikelq ellkqkqqei kqlqkdciks
     1741 qeknsslert vkaleflqse tqkeveaake tsakaaedtk kaqaelshcr vvlddtqsea
     1801 arvlaesikv keelqankeq mkiqmkkkde dferrleqek dkhskeiknm eakvaalqre
     1861 kdhmettvgd lqdslktkdq eakqlegsln ktlaqlaaft rsmsslqddr drvidesktw
     1921 ekkftetiqk keeeirskee acivledqvk hmtmrveelq thisrlecnk kdweadcrke
     1981 iqhhqktcem lqeekkellt rlegsqelys ksqneqqele seisslrdql adlqnsltkc
     2041 elareelgtv vkqqetsiqn fklnceqlea dlqaskdltn klheetsakd qkimnllsak
     2101 eeavmaalae lqqqhseemk elecrlrkee dnkkalenek nkfldklnhl tekmkisree
     2161 skqqkaqlds ftksmsslqd drdrilrdyk qleerhlvii lekdqliqea aaennklkee
     2221 mrsfhsqmdd lnsenaklna elmryredln qvisikdsqq kqllkiqlqr iqtlenekat
     2281 ietqlkesdh iqddlrkcme alredkvsms qeietltssl srvqsemaal hegspivecq
     2341 aelkarekev qqlshelslf qkrirelere lecvqrdaak rvgeaedrlr kelkhlhhda
     2401 gimrneteta eervaelard lmemeqklle vtdenkdlra qiqsfgrsms slqdsrdqan
     2461 eelhilkqky sadleeqksl vqnlqkqmaq lqeeqhstvr drdtvrselt elqkaiderg
     2521 llaqieelsq qlrakddell hlslelegss nqiksfskam aslqndrdrl lneldktrki
     2581 eevkqqaegs isttasevqs lkkalaslqs drdrvvrele nlqqqyilvg veaaensrlk
     2641 aqlqqweqea dkqlrlqeql rqegvvyqqe lqqlrqektt wekqsssmke qylmaiaekd
     2701 kqlshlqrit qemrlpfsrs qtieeqhqsk ispevlkgdf ssleaemkhl qaqlsdslke
     2761 lhqkelriqq lnsklsqvfe eknalslqlr gssrstcesh qhysevlnrc lvlerqlqel
     2821 qaadksmelf atdaapgapq eknesqrgty tpelqelqlr lsetehlhss tkqdmkylee
     2881 qleeerdrrl aaeealfaaq dqirrlqsse wssslsanid mtpgheqsll idsmdnnpsr
     2941 trstpglrrl lrslfrsrar lpllvatyll alhvllflcf tghl
//
LOCUS       XP_041326229             206 aa            linear   VRT 06-MAY-2021
DEFINITION  guanylyl cyclase-activating protein 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326229
VERSION     XP_041326229.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470295.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="guanylyl cyclase-activating protein 1-like
                     isoform X1"
                     /calculated_mol_wt=23761
     Region          11..178
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..206
                     /gene="LOC121355109"
                     /coded_by="XM_041470295.1:732..1352"
                     /db_xref="GeneID:121355109"
ORIGIN      
        1 mgnnssstvd dlqaveihhw ykkfmtecps gqltehefkq ffglrgldpe ankyieqmfr
       61 tfdmnkdgyi dfmeyvaals lvlrgkmeqk lrwyfklydv dgngcidrhe llniikvnlq
      121 gscsclfpqr qitqairain ggdhetsaee ftnrvfnrid vngdgelsld efvegarkde
      181 efmevmmksl dlshivamin nrrhsv
//
LOCUS       XP_041326230             206 aa            linear   VRT 06-MAY-2021
DEFINITION  guanylyl cyclase-activating protein 1-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326230
VERSION     XP_041326230.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470296.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="guanylyl cyclase-activating protein 1-like
                     isoform X1"
                     /calculated_mol_wt=23761
     Region          11..178
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..206
                     /gene="LOC121355109"
                     /coded_by="XM_041470296.1:630..1250"
                     /db_xref="GeneID:121355109"
ORIGIN      
        1 mgnnssstvd dlqaveihhw ykkfmtecps gqltehefkq ffglrgldpe ankyieqmfr
       61 tfdmnkdgyi dfmeyvaals lvlrgkmeqk lrwyfklydv dgngcidrhe llniikvnlq
      121 gscsclfpqr qitqairain ggdhetsaee ftnrvfnrid vngdgelsld efvegarkde
      181 efmevmmksl dlshivamin nrrhsv
//
LOCUS       XP_041326231             188 aa            linear   VRT 06-MAY-2021
DEFINITION  guanylyl cyclase-activating protein 1-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326231
VERSION     XP_041326231.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470297.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523745.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..188
                     /product="guanylyl cyclase-activating protein 1-like
                     isoform X2"
                     /calculated_mol_wt=21757
     Region          11..160
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..188
                     /gene="LOC121355109"
                     /coded_by="XM_041470297.1:399..965"
                     /db_xref="GeneID:121355109"
ORIGIN      
        1 mgnnssstvd dlqaveihhw ykkfmtecps gqltehefkq ffglrgldpe ankyieqmfr
       61 tfdmnkdgyi dfmeyvaals lvlrgkmeqk lrwyfklydv dgngcidrhe llniikaira
      121 inggdhetsa eeftnrvfnr idvngdgels ldefvegark deefmevmmk sldlshivam
      181 innrrhsv
//
LOCUS       XP_041326232             151 aa            linear   VRT 06-MAY-2021
DEFINITION  guanidinoacetate N-methyltransferase A-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326232
VERSION     XP_041326232.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470298.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523750.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..151
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>151
                     /product="guanidinoacetate N-methyltransferase A-like"
     Region          64..>130
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cd02440"
                     /db_xref="CDD:100107"
     Site            order(68..74,91..92,116..118)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..151
                     /gene="LOC121355110"
                     /coded_by="XM_041470298.1:206..>658"
                     /db_xref="GeneID:121355110"
ORIGIN      
        1 mssgaaagpi fsegedcraa wraatagyde pdahleilgk pvmerwetpy mhslatvaas
       61 kggrvlevgf gmaiaaskvq efgieehwii ecnegvfrrl eqwakaqphk vvplkglwed
      121 vvptlpdghf sgetstagwa gagtplqsgg a
//
LOCUS       XP_041326233             115 aa            linear   VRT 06-MAY-2021
DEFINITION  class II histocompatibility antigen, M beta 1 chain-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326233
VERSION     XP_041326233.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470299.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523753.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..115
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>115
                     /product="class II histocompatibility antigen, M beta 1
                     chain-like"
     Region          8..115
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          38..42
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409593"
     Region          85..89
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409593"
     Region          97..102
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409593"
     Region          112..115
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409593"
     CDS             1..115
                     /gene="LOC121355111"
                     /coded_by="XM_041470299.1:1..>346"
                     /db_xref="GeneID:121355111"
ORIGIN      
        1 msptvpsapp qlrivpersg palalvchaw gfspaditlr wfrngaivgd tvgdtvgdtv
       61 gdtvgdtsgq srvlpvgdgt frtqatiqvp pgtsgdtlec valhptleep lrvtw
//
LOCUS       XP_041326234             814 aa            linear   VRT 06-MAY-2021
DEFINITION  stromal interaction molecule 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326234
VERSION     XP_041326234.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470300.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..814
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..814
                     /product="stromal interaction molecule 1"
                     /calculated_mol_wt=89756
     Region          <134..169
                     /region_name="SAM_superfamily"
                     /note="SAM (Sterile alpha motif); cl15755"
                     /db_xref="CDD:472832"
     Region          217..>342
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          310..>381
                     /region_name="SOAR"
                     /note="STIM1 Orai1-activating region; pfam16533"
                     /db_xref="CDD:465164"
     CDS             1..814
                     /gene="STIM1"
                     /coded_by="XM_041470300.1:248..2692"
                     /db_xref="GeneID:121355112"
ORIGIN      
        1 meprpgravr alcglfllll lvlqhpgrae rapgshldes aiaefcridk alchdedeql
       61 sfeavrnihk qmdddangnv dveesdeflr edlnyhdpav khstfhgedk lisvedlwka
      121 wktseeqfla llcrlavnna tmmgtvlkmt drshrqklql kaldtvlfgp plltrhnhlk
      181 dfmlvvsivi gvggcwfayi qnryskehmk kmmkdleglh raeqslhdlq erlqkaqeeh
      241 rsvevekvhl ekklqdeisi akqeahrlre lregtenels rqkyaeqele qvrmalknae
      301 keleshcswa apealqkwlq lthevevqyy nikkqnaekq llvakegaek ikkkrntlfg
      361 tfhvahsssl ddvdhkilta kfsdrsslss edqslwkypa palpstvrqr lvepqhghgs
      421 qrppwaepsl crrssarqae pslsaggapr arpgpcslla elrglsprsl paelhrlsra
      481 ltlwrssagr avpslspcvv aapalpstvr qrlvepqhgh gsqrlveslv pgqpeagpva
      541 plragraslr rmhsltsgqs fssdlpgssp spastsstsc ssstttapap achvhpiyyh
      601 httsyflqmd sipdlpppdv tsgvrcrtgs fgdltrcdsd ssiphlsdhq ripssapkll
      661 aarptlltrs meeavpaapg pgaptpnggs rhgepsalaa lqerlpespm vmkkmmmvnh
      721 gmekssslge ishptagkps hsdssrshsp sstdpdtpsp isdcrpsgar ntripqlaak
      781 kspgdedssl tgdevdlgqs kkkfplkifk kpkk
//
LOCUS       XP_041326235             642 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 1 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326235
VERSION     XP_041326235.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470301.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 1 isoform X1"
                     /calculated_mol_wt=67307
     Region          189..217
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          302..437
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          465..592
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(476,551,570)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(487,489,538..539,541..548,550,558,564,574,576,579,
                     583,586..587,589..590)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..642
                     /gene="APBB1"
                     /coded_by="XM_041470301.1:543..2471"
                     /db_xref="GeneID:121355113"
ORIGIN      
        1 msgalskrsd landnrcpgl slglaaapdp rtgpggapae elpgagwaka gqdqnrnele
       61 pepgpgrspg ahgespgale pgvrtrnarn aagdpralli gaseeeeeee deeedeeeed
      121 gagvsppavg aerglreppg rsasrlfggp gpgsdedssw atlsqgspgs spdepeslwp
      181 cgagahgdlp pgwlrvqdts gtyywhvptg ttqweppggp hetpsdgstp tegptlswts
      241 fapaetfndg dlwkdptaee eeeeeeeeed eepgvsdlem lspgpgspge gmalgeedvl
      301 dskglpvrsl gwvqlreeel gpgrsssavs acirqlsgsr egppgtwgea ralllleert
      361 lklvdpqdra llhaqpvggi rvwgvgrhgs rerdfayvar dpltqvlkch vfrcegpasa
      421 iaaglhrvca qltaerrsar aagnslgtdt prlgepplqv efpapksevv qrfpvcylgc
      481 vpvakpvgmd vinaaleaal apgsgeppap tpvvvsvapa tltiahrqte avlcecrvrf
      541 lsfmgvgrdv rafafimasa pgtfrchmvw cepnaaglse alqaacvlry qkcldarpqa
      601 sssclpappa dsvarrvgss vrrgvqtllg tlkprrggaq tp
//
LOCUS       XP_041326237             642 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 1 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326237
VERSION     XP_041326237.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470303.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..642
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 1 isoform X1"
                     /calculated_mol_wt=67307
     Region          189..217
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          302..437
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          465..592
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(476,551,570)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(487,489,538..539,541..548,550,558,564,574,576,579,
                     583,586..587,589..590)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..642
                     /gene="APBB1"
                     /coded_by="XM_041470303.1:270..2198"
                     /db_xref="GeneID:121355113"
ORIGIN      
        1 msgalskrsd landnrcpgl slglaaapdp rtgpggapae elpgagwaka gqdqnrnele
       61 pepgpgrspg ahgespgale pgvrtrnarn aagdpralli gaseeeeeee deeedeeeed
      121 gagvsppavg aerglreppg rsasrlfggp gpgsdedssw atlsqgspgs spdepeslwp
      181 cgagahgdlp pgwlrvqdts gtyywhvptg ttqweppggp hetpsdgstp tegptlswts
      241 fapaetfndg dlwkdptaee eeeeeeeeed eepgvsdlem lspgpgspge gmalgeedvl
      301 dskglpvrsl gwvqlreeel gpgrsssavs acirqlsgsr egppgtwgea ralllleert
      361 lklvdpqdra llhaqpvggi rvwgvgrhgs rerdfayvar dpltqvlkch vfrcegpasa
      421 iaaglhrvca qltaerrsar aagnslgtdt prlgepplqv efpapksevv qrfpvcylgc
      481 vpvakpvgmd vinaaleaal apgsgeppap tpvvvsvapa tltiahrqte avlcecrvrf
      541 lsfmgvgrdv rafafimasa pgtfrchmvw cepnaaglse alqaacvlry qkcldarpqa
      601 sssclpappa dsvarrvgss vrrgvqtllg tlkprrggaq tp
//
LOCUS       XP_041326238             640 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 1 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326238
VERSION     XP_041326238.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470304.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..640
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 1 isoform X2"
                     /calculated_mol_wt=67022
     Region          189..217
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          302..435
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          463..590
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(474,549,568)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(485,487,536..537,539..546,548,556,562,572,574,577,
                     581,584..585,587..588)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..640
                     /gene="APBB1"
                     /coded_by="XM_041470304.1:540..2462"
                     /db_xref="GeneID:121355113"
ORIGIN      
        1 msgalskrsd landnrcpgl slglaaapdp rtgpggapae elpgagwaka gqdqnrnele
       61 pepgpgrspg ahgespgale pgvrtrnarn aagdpralli gaseeeeeee deeedeeeed
      121 gagvsppavg aerglreppg rsasrlfggp gpgsdedssw atlsqgspgs spdepeslwp
      181 cgagahgdlp pgwlrvqdts gtyywhvptg ttqweppggp hetpsdgstp tegptlswts
      241 fapaetfndg dlwkdptaee eeeeeeeeed eepgvsdlem lspgpgspge gmalgeedvl
      301 dskglpvrsl gwvqlreeel gpgrsssavs acirqlsgsr egppgtwgea ralllleert
      361 lklvdpqdra llhaqpvggi rvwgvgrhgs rdfayvardp ltqvlkchvf rcegpasaia
      421 aglhrvcaql taerrsaraa gnslgtdtpr lgepplqvef papksevvqr fpvcylgcvp
      481 vakpvgmdvi naaleaalap gsgeppaptp vvvsvapatl tiahrqteav lcecrvrfls
      541 fmgvgrdvra fafimasapg tfrchmvwce pnaaglseal qaacvlryqk cldarpqass
      601 sclpappads varrvgssvr rgvqtllgtl kprrggaqtp
//
LOCUS       XP_041326239             623 aa            linear   VRT 06-MAY-2021
DEFINITION  amyloid-beta A4 precursor protein-binding family B member 1 isoform
            X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326239
VERSION     XP_041326239.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470305.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="amyloid-beta A4 precursor protein-binding family
                     B member 1 isoform X3"
                     /calculated_mol_wt=65140
     Region          189..217
                     /region_name="WW"
                     /note="WW domain; pfam00397"
                     /db_xref="CDD:459800"
     Region          283..418
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          446..573
                     /region_name="PTB2_Fe65"
                     /note="Fe65 C-terminal Phosphotyrosine-binding (PTB)
                     domain; cd01271"
                     /db_xref="CDD:269969"
     Site            order(457,532,551)
                     /site_type="other"
                     /note="putative phosphoinositide binding site [chemical
                     binding]"
                     /db_xref="CDD:269969"
     Site            order(468,470,519..520,522..529,531,539,545,555,557,560,
                     564,567..568,570..571)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:269969"
     CDS             1..623
                     /gene="APBB1"
                     /coded_by="XM_041470305.1:543..2414"
                     /db_xref="GeneID:121355113"
ORIGIN      
        1 msgalskrsd landnrcpgl slglaaapdp rtgpggapae elpgagwaka gqdqnrnele
       61 pepgpgrspg ahgespgale pgvrtrnarn aagdpralli gaseeeeeee deeedeeeed
      121 gagvsppavg aerglreppg rsasrlfggp gpgsdedssw atlsqgspgs spdepeslwp
      181 cgagahgdlp pgwlrvqdts gtyywhvptg ttqweppggp hetpsdgstp tegptdptae
      241 eeeeeeeeee deepgvsdle mlspgpgspg egmalgeedv ldskglpvrs lgwvqlreee
      301 lgpgrsssav sacirqlsgs regppgtwge aralllleer tlklvdpqdr allhaqpvgg
      361 irvwgvgrhg srerdfayva rdpltqvlkc hvfrcegpas aiaaglhrvc aqltaerrsa
      421 raagnslgtd tprlgepplq vefpapksev vqrfpvcylg cvpvakpvgm dvinaaleaa
      481 lapgsgeppa ptpvvvsvap atltiahrqt eavlcecrvr flsfmgvgrd vrafafimas
      541 apgtfrchmv wcepnaagls ealqaacvlr yqkcldarpq asssclpapp adsvarrvgs
      601 svrrgvqtll gtlkprrgga qtp
//
LOCUS       XP_041326240             627 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin phosphodiesterase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326240
VERSION     XP_041326240.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470306.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..627
                     /product="sphingomyelin phosphodiesterase isoform X1"
                     /calculated_mol_wt=68051
     Region          195..492
                     /region_name="MPP_ASMase"
                     /note="acid sphingomyelinase and related proteins,
                     metallophosphatase domain; cd00842"
                     /db_xref="CDD:277321"
     Site            order(200,202,274,314..315,421,453,455)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277321"
     Site            order(200,202,274,314,421,453,455)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277321"
     Region          470..594
                     /region_name="ASMase_C"
                     /note="Acid sphingomyelin phosphodiesterase C-terminal
                     region; pfam19272"
                     /db_xref="CDD:466022"
     CDS             1..627
                     /gene="SMPD1"
                     /coded_by="XM_041470306.1:23..1906"
                     /db_xref="GeneID:121355115"
ORIGIN      
        1 maagaraplp lpplpplpal sprpplpals prpplpalls lplplalaal allalpvsag
       61 sppgpeqqla aaaprwgwrn vscpacrvlf galdlalqle pnvarvgrva srlcqelrla
      121 rppvcrqavq lfqgdvvaaw arsvlrppea cglllgprcg hwdilgawnl slpaapkppv
      181 rppappppga ptarilfltd lhwdrqyapg saaacpdplc crgapgegpg aagfwgsysk
      241 cdlplhtida llaqlpngtg ngtggfaaay wtgdipahdv wqqsrgdqlr alrtvtallr
      301 arlgglrvfp avgnheatpv nafpppyvrg nrsaawlyda maeawqhwlp paalrtlrag
      361 gfytaqvwpg lrlvslnmnf csqanfwlli natdpagqlq wlmgvladae rdgekvhiig
      421 hippahclrs wswnyyrivs rfegtiaaqf fghthldefe lfydeetlsr pvsiafiaps
      481 vttyislnpg yrvyevagsy pgsshavldh etfilnltea naappgtapr wrrlygarea
      541 yglpaafpad wdrlvrrmqd deplfqlfwf hlhkghppre pcggpckaal lcalrsgraa
      601 npalcrplrp alpfpriqel whqrrlc
//
LOCUS       XP_041326241             615 aa            linear   VRT 06-MAY-2021
DEFINITION  sphingomyelin phosphodiesterase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326241
VERSION     XP_041326241.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470307.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..615
                     /product="sphingomyelin phosphodiesterase isoform X2"
                     /calculated_mol_wt=66814
     Region          183..480
                     /region_name="MPP_ASMase"
                     /note="acid sphingomyelinase and related proteins,
                     metallophosphatase domain; cd00842"
                     /db_xref="CDD:277321"
     Site            order(188,190,262,302..303,409,441,443)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:277321"
     Site            order(188,190,262,302,409,441,443)
                     /site_type="other"
                     /note="putative metal binding site [ion binding]"
                     /db_xref="CDD:277321"
     Region          458..582
                     /region_name="ASMase_C"
                     /note="Acid sphingomyelin phosphodiesterase C-terminal
                     region; pfam19272"
                     /db_xref="CDD:466022"
     CDS             1..615
                     /gene="SMPD1"
                     /coded_by="XM_041470307.1:10..1857"
                     /db_xref="GeneID:121355115"
ORIGIN      
        1 maagaraplp lpplpalspr pplpallslp lplalaalal lalpvsagsp pgpeqqlaaa
       61 aprwgwrnvs cpacrvlfga ldlalqlepn varvgrvasr lcqelrlarp pvcrqavqlf
      121 qgdvvaawar svlrppeacg lllgprcghw dilgawnlsl paapkppvrp pappppgapt
      181 arilfltdlh wdrqyapgsa aacpdplccr gapgegpgaa gfwgsyskcd lplhtidall
      241 aqlpngtgng tggfaaaywt gdipahdvwq qsrgdqlral rtvtallrar lgglrvfpav
      301 gnheatpvna fpppyvrgnr saawlydama eawqhwlppa alrtlraggf ytaqvwpglr
      361 lvslnmnfcs qanfwllina tdpagqlqwl mgvladaerd gekvhiighi ppahclrsws
      421 wnyyrivsrf egtiaaqffg hthldefelf ydeetlsrpv siafiapsvt tyislnpgyr
      481 vyevagsypg sshavldhet filnlteana appgtaprwr rlygareayg lpaafpadwd
      541 rlvrrmqdde plfqlfwfhl hkghpprepc ggpckaallc alrsgraanp alcrplrpal
      601 pfpriqelwh qrrlc
//
LOCUS       XP_041326243             684 aa            linear   VRT 06-MAY-2021
DEFINITION  tRNA wybutosine-synthesizing protein 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326243
VERSION     XP_041326243.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470309.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="tRNA wybutosine-synthesizing protein 4"
                     /calculated_mol_wt=75143
     Region          <54..205
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Region          492..>657
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          532..581
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..684
                     /gene="LCMT2"
                     /coded_by="XM_041470309.1:288..2342"
                     /db_xref="GeneID:121355116"
ORIGIN      
        1 mplgsgsavs lsrqvqgtgg ssavskcsaa argyiqdrfl rllagrrrrr aplihrgyyi
       61 raravdhcvq dfllktqnlp rtqilslgag fdslyfrlkd mgllhhtvvy evdfpnvacq
      121 katlikgvke lsalvgdtgg ersgaitfsg ddykllgvdl selseleril eeaglnneip
      181 tlfiaevvlt ymestrsdal iqwaaehfpq acfllyeqvh pedpfgrvmq qhfrqlstal
      241 rslaqypdcq aqqrrflgkg wtecsvmdmn efftcciped eqqrvqtlep fdeyeewhlk
      301 cshyfvlaas kgmepswtpl spsvtvprha gpvgmagsvp aavcarlsgi pglrryghhs
      361 vlikpnmilt tggfgeeggq hcrvrnfhml skhaghweav cvtqnipdkr wgerlyhtvs
      421 clsdtlalvl ggrtspsgtg lgmlwlkfpk tcgasgpddv avelvslqpa aeaaalrwrh
      481 stteitfkge qylfvyggrs alepvlgdwh flhapelsct aiavegpvpe srhshsacsw
      541 eggvliaggl gaaeqplgsv fllrelehgf qwqtiethpp lvpryshtah vhegklllvg
      601 gvwfhassvp gvtvinlmtg lclnyvinve hlewplmlhn hssvflphek ellviggggn
      661 cfsfgthlnp epvllslssi ltsh
//
LOCUS       XP_041326244             215 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355117 [Pyrgilauda ruficollis].
ACCESSION   XP_041326244
VERSION     XP_041326244.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470310.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..215
                     /product="uncharacterized protein LOC121355117"
                     /calculated_mol_wt=22643
     CDS             1..215
                     /gene="LOC121355117"
                     /coded_by="XM_041470310.1:1..648"
                     /db_xref="GeneID:121355117"
ORIGIN      
        1 magpgslrrt prggdcsvrr rrmplrpslr sprspkqpgr gspgrsqrqr gpavahspgg
       61 rsqprgslgp gghsgpgvtr trgslaardv rgpccahrad rkqerragrr ergarplagp
      121 pwhcrclppv rdrgrrrssg errkapgscg rgtrargals ngqgtpralg sghgthrars
      181 apgtghrars apgcghraap arfvksrmng ersaa
//
LOCUS       XP_041326245            1002 aa            linear   VRT 06-MAY-2021
DEFINITION  FTS and Hook-interacting protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326245
VERSION     XP_041326245.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470311.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1002
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1002
                     /product="FTS and Hook-interacting protein isoform X1"
                     /calculated_mol_wt=108828
     Region          102..425
                     /region_name="RAI16-like"
                     /note="Retinoic acid induced 16-like protein; pfam10257"
                     /db_xref="CDD:370927"
     Region          <453..813
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          798..891
                     /region_name="DUF5917"
                     /note="Family of unknown function (DUF5917); pfam19314"
                     /db_xref="CDD:466037"
     Region          963..994
                     /region_name="KELAA"
                     /note="KELAA motif; pfam19311"
                     /db_xref="CDD:466035"
     CDS             1..1002
                     /gene="FHIP1B"
                     /coded_by="XM_041470311.1:276..3284"
                     /db_xref="GeneID:121355118"
ORIGIN      
        1 mermswlskl tpraggqrap rsaslqppvt adpetclmvf knhwaqvlri lerrgskpap
       61 ddlsavrnnt yqmlnllaed rpwgdgdkdr sqgdgdmacg pilefvaaen llerllcwhl
      121 qgdfteerkv eqlklyemli sqarqpllrh kpvltpllrl lsvcaepasa plenslvlll
      181 nqlcvsvare pailelffhs htdqgpanli ifsllipfih hegtrgqqar dalllimams
      241 asnravaqsi tdnsyfcpvl atglsalyss lprkievrgd dwhflrredw igvsslvlfm
      301 nslefcnavi qvahplvqkq lvdyvhngfl vpvmgpalhk tsveemiast ayldlflrsv
      361 setallktfl rfvllhrhdn ttildtlvgr insnsrlcmv slslfrtlls lncedvmlql
      421 vlryllpcsh vmlsqkravr dldiygktaa kflsliprcc rpespppprd rdeepparar
      481 ghgspgadap papkpstpsr lsffmrqaga apaeaaaprs pgppagspsr pgprdevael
      541 drnyleylrd arhsidrcaw acrvwsapyd gedprapgpt pdpdsppgrp pgpptprtkk
      601 rglpeegare alggplagde praggpgpep reggtlvnga lgaaepgrpe gdvvvkkvrr
      661 spqgegeggg gapngaprar ppgweplpsv dslleellar vpaeppgagv sietfteelr
      721 eieaemqngg vggtpatpte ppepplshee eeafasftal pegdagtgra pprppdplaq
      781 vvasppravg pppsqpftgp fvsvlfgkle nmphnslyvn flltglvaql acypqpllrs
      841 fllntnmvfq psvksllqvl gsvknkiesf aatqedfpal lfkakkylia rgrldwaegp
      901 gavpalrrtd tlarsrkpsl gelllrhans ptrarhaaql alqglrdggl hplapparhg
      961 ealrvrnavy cavifseflk elaaiaqaha vtspfltepp ee
//
LOCUS       XP_041326246             986 aa            linear   VRT 06-MAY-2021
DEFINITION  FTS and Hook-interacting protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326246
VERSION     XP_041326246.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470312.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..986
                     /product="FTS and Hook-interacting protein isoform X2"
                     /calculated_mol_wt=107170
     Region          102..409
                     /region_name="RAI16-like"
                     /note="Retinoic acid induced 16-like protein; pfam10257"
                     /db_xref="CDD:370927"
     Region          <437..797
                     /region_name="PHA03247"
                     /note="large tegument protein UL36; Provisional"
                     /db_xref="CDD:223021"
     Region          782..875
                     /region_name="DUF5917"
                     /note="Family of unknown function (DUF5917); pfam19314"
                     /db_xref="CDD:466037"
     Region          947..978
                     /region_name="KELAA"
                     /note="KELAA motif; pfam19311"
                     /db_xref="CDD:466035"
     CDS             1..986
                     /gene="FHIP1B"
                     /coded_by="XM_041470312.1:276..3236"
                     /db_xref="GeneID:121355118"
ORIGIN      
        1 mermswlskl tpraggqrap rsaslqppvt adpetclmvf knhwaqvlri lerrgskpap
       61 ddlsavrnnt yqmlnllaed rpwgdgdkdr sqgdgdmacg pilefvaaen llerllcwhl
      121 qgdfteerkv eqlklyemli sqarqpllrh kpvltpllrl lsvcaepasa plenslvlll
      181 nqlcvsvare pailelffhs htdqgpanli ifsllipfih hegtrgqqar dalllimams
      241 asnravaqsi tdnsyfcpie vrgddwhflr redwigvssl vlfmnslefc naviqvahpl
      301 vqkqlvdyvh ngflvpvmgp alhktsveem iastayldlf lrsvsetall ktflrfvllh
      361 rhdnttildt lvgrinsnsr lcmvslslfr tllslncedv mlqlvlryll pcshvmlsqk
      421 ravrdldiyg ktaakflsli prccrpespp pprdrdeepp ararghgspg adappapkps
      481 tpsrlsffmr qagaapaeaa aprspgppag spsrpgprde vaeldrnyle ylrdarhsid
      541 rcawacrvws apydgedpra pgptpdpdsp pgrppgpptp rtkkrglpee garealggpl
      601 agdepraggp gpepreggtl vngalgaaep grpegdvvvk kvrrspqgeg eggggapnga
      661 prarppgwep lpsvdsllee llarvpaepp gagvsietft eelreieaem qnggvggtpa
      721 tpteppeppl sheeeeafas ftalpegdag tgrapprppd plaqvvaspp ravgpppsqp
      781 ftgpfvsvlf gklenmphns lyvnflltgl vaqlacypqp llrsfllntn mvfqpsvksl
      841 lqvlgsvknk iesfaatqed fpallfkakk yliargrldw aegpgavpal rrtdtlarsr
      901 kpslgelllr hansptrarh aaqlalqglr dgglhplapp arhgealrvr navycavifs
      961 eflkelaaia qahavtspfl teppee
//
LOCUS       XP_041326247             289 aa            linear   VRT 06-MAY-2021
DEFINITION  post-GPI attachment to proteins factor 2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326247
VERSION     XP_041326247.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470313.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="post-GPI attachment to proteins factor 2 isoform
                     X1"
                     /calculated_mol_wt=33065
     Region          53..276
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..289
                     /gene="PGAP2"
                     /coded_by="XM_041470313.1:95..964"
                     /db_xref="GeneID:121355119"
ORIGIN      
        1 mprdrahvpf lpdpsgglqg rpcpalpssl lsvsrmlqvp lpldrdgilf rlrfttlalg
       61 tvfcplfgfl fcviwsllfn frettathcg vpnylpsisa aiggetpqry vwrlciglhs
      121 aprvlvavay wnhyqschcp hprylrlchv tlllnllenf alliltyvss tenyaihena
      181 fivfitsalg hmlltcilwr mtkkhtvspe erksykwkql lffftfitfa favcvyfhhn
      241 wycgpgvytv fafleylvvl snmafhmtaf wdfgnkelvv sslledkhf
//
LOCUS       XP_041326248             285 aa            linear   VRT 06-MAY-2021
DEFINITION  post-GPI attachment to proteins factor 2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326248
VERSION     XP_041326248.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470314.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..285
                     /product="post-GPI attachment to proteins factor 2 isoform
                     X2"
                     /calculated_mol_wt=32653
     Region          53..272
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..285
                     /gene="PGAP2"
                     /coded_by="XM_041470314.1:98..955"
                     /db_xref="GeneID:121355119"
ORIGIN      
        1 mprdrahvpf lpdpsgglqg rpcpalpssl lsvsrmlqvp lpldrdgilf rlrfttlalg
       61 tvfcplfgfl fcviwsllfn frettathcg vpnylpsisa aiggetpqry vwrlciglhs
      121 aprvlvavay wnhyqschcp hprylrlchv tlllnllenf alliltyvss tenyaihena
      181 fivfitsalg hmlltcilwr mtkkhterks ykwkqllfff tfitfafavc vyfhhnwycg
      241 pgvytvfafl eylvvlsnma fhmtafwdfg nkelvvssll edkhf
//
LOCUS       XP_041326249             254 aa            linear   VRT 06-MAY-2021
DEFINITION  post-GPI attachment to proteins factor 2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326249
VERSION     XP_041326249.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470315.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..254
                     /product="post-GPI attachment to proteins factor 2 isoform
                     X3"
                     /calculated_mol_wt=29371
     Region          18..241
                     /region_name="Frag1"
                     /note="Frag1/DRAM/Sfk1 family; pfam10277"
                     /db_xref="CDD:431193"
     CDS             1..254
                     /gene="PGAP2"
                     /coded_by="XM_041470315.1:137..901"
                     /db_xref="GeneID:121355119"
ORIGIN      
        1 mlqvplpldr dgilfrlrft tlalgtvfcp lfgflfcviw sllfnfrett athcgvpnyl
       61 psisaaigge tpqryvwrlc iglhsaprvl vavaywnhyq schcphpryl rlchvtllln
      121 llenfallil tyvsstenya ihenafivfi tsalghmllt cilwrmtkkh tvspeerksy
      181 kwkqllffft fitfafavcv yfhhnwycgp gvytvfafle ylvvlsnmaf hmtafwdfgn
      241 kelvvsslle dkhf
//
LOCUS       XP_041326250             191 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoG [Pyrgilauda ruficollis].
ACCESSION   XP_041326250
VERSION     XP_041326250.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470316.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="rho-related GTP-binding protein RhoG"
                     /calculated_mol_wt=21273
     Region          1..191
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133277"
     Site            order(12..18,60,115..116,118,158..160)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133277"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133277"
     Site            38..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133277"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133277"
     Site            order(59..60,76..77)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133277"
     Site            115..118
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133277"
     Site            158..160
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133277"
     CDS             1..191
                     /gene="RHOG"
                     /coded_by="XM_041470316.1:157..732"
                     /db_xref="GeneID:121355121"
ORIGIN      
        1 mqsikcvvvg dgavgktcll icyttnafpk eyiptvfdny saqntvdgrt inlnlwdtag
       61 qeeydrlrtl sypqtnvfii cfsiasppsy envkhkwype vchhcpsvpi llvgtkkdlr
      121 nnpetmkrlk eqnqapittq qgislskqir avkylecsal nqegikdvft eavravlnpa
      181 pakpkkpcvl l
//
LOCUS       XP_041326251             191 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoG [Pyrgilauda ruficollis].
ACCESSION   XP_041326251
VERSION     XP_041326251.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470317.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="rho-related GTP-binding protein RhoG"
                     /calculated_mol_wt=21273
     Region          1..191
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            10..17
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133277"
     Site            order(12..18,60,115..116,118,158..160)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133277"
     Site            35
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133277"
     Site            38..40
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133277"
     Site            57..60
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133277"
     Site            order(59..60,76..77)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133277"
     Site            115..118
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133277"
     Site            158..160
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133277"
     CDS             1..191
                     /gene="RHOG"
                     /coded_by="XM_041470317.1:202..777"
                     /db_xref="GeneID:121355121"
ORIGIN      
        1 mqsikcvvvg dgavgktcll icyttnafpk eyiptvfdny saqntvdgrt inlnlwdtag
       61 qeeydrlrtl sypqtnvfii cfsiasppsy envkhkwype vchhcpsvpi llvgtkkdlr
      121 nnpetmkrlk eqnqapittq qgislskqir avkylecsal nqegikdvft eavravlnpa
      181 pakpkkpcvl l
//
LOCUS       XP_041326252             324 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 51G2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326252
VERSION     XP_041326252.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470318.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="olfactory receptor 51G2-like"
                     /calculated_mol_wt=35958
     Region          34..308
                     /region_name="7tmA_OR51-like"
                     /note="olfactory receptor family 51 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15222"
                     /db_xref="CDD:320350"
     Region          35..61
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320350"
     Region          68..94
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320350"
     Site            order(90,93..94,106..111,113..114,117,162,164..168,204,
                     207..209,211..213,215..216,261,264..265,267..268,271,
                     279..280,282..284,287,290..291)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320350"
     Region          106..136
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320350"
     Region          149..170
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320350"
     Region          204..234
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320350"
     Region          241..271
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320350"
     Region          280..305
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320350"
     CDS             1..324
                     /gene="LOC121355122"
                     /coded_by="XM_041470318.1:190..1164"
                     /db_xref="GeneID:121355122"
ORIGIN      
        1 mehdshtpwe lngsfhqpsa flmvgipgle alhpwisipf calylsallg ncvilfivgr
       61 tpslhepmyy flsmlavtdl glalctlptt lglfwfgarr iafdaclaqm cfihilsfie
      121 ssvllamafd rfvaishplr hpailtqgtv lkiglaivlr gvlsllpipf llkrltycgr
      181 telshsfcfh pdimnlacad ikvnvfygmi illstvgtdf vfivlsyili irtvvslttk
      241 eeclkalntc vshicavlvf fipmiglsmi hrfgrnvppl vntlvaytyl iippalnpli
      301 ysiksthire allralcrkp asdw
//
LOCUS       XP_041326254             436 aa            linear   VRT 06-MAY-2021
DEFINITION  gastrin/cholecystokinin type B receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041326254
VERSION     XP_041326254.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470320.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="gastrin/cholecystokinin type B receptor"
                     /calculated_mol_wt=47147
     Region          57..393
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          59..83
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320645"
     Region          92..114
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320645"
     Region          130..152
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320645"
     Region          175..191
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320645"
     Region          220..243
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320645"
     Region          324..346
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320645"
     Region          361..386
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320645"
     CDS             1..436
                     /gene="CCKBR"
                     /coded_by="XM_041470320.1:11..1321"
                     /db_xref="GeneID:121355123"
ORIGIN      
        1 mdprplnesl qemlcrsgng tgngpgtgtg ngtnrtlcdl lrrglrgppa preldvavrv
       61 vlyvlifvls vggnalvvav lalnrrlrtv tncfllslal sdlllalccm pftllpglmg
      121 afifgdvvck lvaylmgvsv avstfslvai aierysaicn plqsrawqtr shacrviagt
      181 walaallmlp yavysttrpa aprpppaqct hhwpservrq vwyvllllvl ffipgvvmtv
      241 ayglisrely rgirfeldvk gevaaprgtg gdrapacdeg dgcylqlsrp gaalelralg
      301 aaaqqdrari nssgaqlaak rrvirmlvvi vamfflcwlp ifaantwraf apraaqrals
      361 gtpiafihll sytsacanpl iycfmnrrfr kafgatcagw gcrracprrp pedeppmasa
      421 slskfsyttv sslgpp
//
LOCUS       XP_041326255            1771 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear pore complex protein Nup98-Nup96 [Pyrgilauda ruficollis].
ACCESSION   XP_041326255
VERSION     XP_041326255.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470321.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1771
                     /product="nuclear pore complex protein Nup98-Nup96"
                     /calculated_mol_wt=191603
     Region          7..>450
                     /region_name="COG4625"
                     /note="Uncharacterized conserved protein, contains a
                     C-terminal beta-barrel porin domain [Function unknown]"
                     /db_xref="CDD:443664"
     Region          79..160
                     /region_name="Nucleoporin_FG"
                     /note="Nucleoporin FG repeat region; pfam13634"
                     /db_xref="CDD:463941"
     Region          724..866
                     /region_name="Nucleoporin2"
                     /note="Nucleoporin autopeptidase; pfam04096"
                     /db_xref="CDD:461171"
     Region          1323..1579
                     /region_name="Nup96"
                     /note="Nuclear protein 96; pfam12110"
                     /db_xref="CDD:463462"
     CDS             1..1771
                     /gene="NUP98"
                     /coded_by="XM_041470321.1:162..5477"
                     /db_xref="GeneID:121355124"
ORIGIN      
        1 mfnksfgtpf ggstgfgtts tfgqnagfgt tsggafgtsa fgsssntgsl fgstqskpgg
       61 lfgsttfnqp atsststgfg fgtstgtsns lfgttstggs lfssqnnafa qnkpagfgnf
      121 gtstssgglf gttnttsnpf gstsgslfgp tsftaaptgt tikfnpptgt dtmvksgvst
      181 nintkhqcit amkeyesksl eelrledyqa nrkgptnpvg agataglfgs statsstatg
      241 lfgssttntg fsygqnktaf gtsttgfgtg ttgglfgqqs qttslfnkpf gqatttqntg
      301 fsfggtstlg qpntntmglf gvtqpsqpgg lfgtaantna gtgfgtgtgl fgqantgfgv
      361 ggstlfgnkp agfgatttsa psfgtttggg lfgfgantag nslfgnkpat gtlgtglgtg
      421 fgtalgagqt slfgntqpkl ggtlgtgafg apgfntstat lgfgapqpav altdpnasaa
      481 qqavlqqhln sltyspfgds plfrnpmsdp kkkeerlkpt npaaqkaltt pthykltprp
      541 atrvrpkalq sagsaksqlf dgldddepsl sngafmpkks ikklvlknlg ssnlfspvsr
      601 enedlaspse ypengdrffl svppeenhrq dgereeeeea hevtrfytnp iakpipqsle
      661 gsghkshssv ddtivalnmr aalrnglegs sedasfqeds lqeewdkeie pglqqhpagi
      721 vltragyyti ptleelarlt ndrkecivtd ftigrtgygs iyfegevnlt nlnldeivhi
      781 rrkevivypd dekkppigeg lnrraevtld gvwptdktsr cliksperla emdyegrlea
      841 vsrkqgarfk eyrpetgswv fkvahfskyg lqdsdedeed rplkvdtkkl kttpvpppgh
      901 lppqqmalng kpappaqppe leqlgrvvel dsdmadvtqe paqeplaeda laeeqeavpa
      961 sthiastqgi npyvlqimka slladdddld lildypgkqp vrmdtsqeic sprlpisksq
     1021 gqkrhtaagl lqskfasvlf qapsaavada kgprtlgspp caalwsaasp lasafavpaa
     1081 vpevqvktvg arrqrglvpl ersitygkgk llmdmglfmg rsfrvgwgpn wtlvncgdql
     1141 sgssevedaq vepveygflp tpvapkslte spfkvhvekl sleqwkmdrd kelyltplei
     1201 klkhstvhmd epcpllapnp gvsaihdyad warkasedpt vaeseyrmil lterfrlaqp
     1261 cqpkqcqlrr rtlegvpatg rgwnrmsfri ppsprprgav rcaaegvpag dhrlalllaq
     1321 lagsqpvrdl ltlqlvdwhr lhsdrfiqee rlrlfallag kpvwqlseri tvnvcslldw
     1381 krcvavhlwy llpptasisk alamyelafq ntsecekyac cplppyleds gyvieeddng
     1441 grplrdvcfh llklysdrsy eldqlldprs vtsdpldfrl swhlwevlra lnyshlsqqs
     1501 wgvlntsyaa qleseglwew avfvmlhepd thvrekavre llsrhcalae saeswakesf
     1561 ltqrlcvppr wiheakavra rmegdkhkea lflfkaghwn qchklvvrhl asdaiineny
     1621 kylkgfledl appersaliq dwelaglvyl dyirvnemld riqqldvsty elerlhtkvt
     1681 slcnrieqlq chtakdrlaq sdmakrvanv lrvvlslqqg pepgpepaep rvplrllaph
     1741 igrlpmpedy aleelrgltq aylrelalaa h
//
LOCUS       XP_041326256             320 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 52B2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326256
VERSION     XP_041326256.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470322.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="olfactory receptor 52B2-like"
                     /calculated_mol_wt=35490
     Region          27..301
                     /region_name="7tmA_OR52B-like"
                     /note="olfactory receptor subfamily 52B and related
                     proteins, member of the class A family of
                     seven-transmembrane G protein-coupled receptors; cd15221"
                     /db_xref="CDD:320349"
     Region          28..54
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320349"
     Region          61..88
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320349"
     Site            order(83,86..87,99..104,106..107,110,155,157..161,197,
                     200..202,204..206,208..209,254,257..258,260..261,264,
                     272..273,275..277,280,283..284)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320349"
     Region          99..129
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320349"
     Region          142..163
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320349"
     Region          197..227
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320349"
     Region          234..264
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320349"
     Region          273..298
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320349"
     CDS             1..320
                     /gene="LOC121355126"
                     /coded_by="XM_041470322.1:19..981"
                     /db_xref="GeneID:121355126"
ORIGIN      
        1 myelnessfd pitfvltgip gmeeshvwis vpfclmylta vlsnllllfv iatdrslhep
       61 mylflamlal sdlllstttv pkmlaifwfs areisfdaci tqmffthfsf ivessvllam
      121 afdryvavca plryaalltp saiakvaaaa vargccimfp pvfllkrlpy cghkvmphty
      181 cehmgiarla cadiranvwy glttallssg ldvvliaasy alilravfrl pspaarlktl
      241 stcgshlcvi lmfyvpaffs flthrfgrqi psqahillan lyvvvppmln pivygvrtrp
      301 irervtrllc pagteracrc
//
LOCUS       XP_041326257             891 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclic nucleotide-gated cation channel alpha-4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326257
VERSION     XP_041326257.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470323.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..891
                     /product="cyclic nucleotide-gated cation channel alpha-4"
                     /calculated_mol_wt=95628
     Region          <47..>150
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          208..449
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     Region          521..637
                     /region_name="CAP_ED"
                     /note="effector domain of the CAP family of transcription
                     factors; members include CAP (or cAMP receptor protein
                     (CRP)), which binds cAMP, FNR (fumarate and nitrate
                     reduction), which uses an iron-sulfur cluster to sense
                     oxygen) and CooA, a heme containing CO...; cd00038"
                     /db_xref="CDD:237999"
     Site            order(587..588,603..605)
                     /site_type="other"
                     /note="ligand binding site [chemical binding]"
                     /db_xref="CDD:237999"
     Site            order(625..627,631..633)
                     /site_type="other"
                     /note="flexible hinge region"
                     /db_xref="CDD:237999"
     Region          637..706
                     /region_name="CLZ"
                     /note="C-terminal leucine zipper domain of cyclic
                     nucleotide-gated channels; pfam16526"
                     /db_xref="CDD:465160"
     Region          <717..>835
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     CDS             1..891
                     /gene="CNGA4"
                     /coded_by="XM_041470323.1:1..2676"
                     /db_xref="GeneID:121355127"
ORIGIN      
        1 mprgraaylg qgrggpvpsa phlrraeeas gagsgppggt gplalgtaar pdpspprplt
       61 ptapgpgrsl rpraakggrr pgqpgtaaeg rldlprggpr apdaifpprp thrarwprpp
      121 rpgtptaarg hahrgtgirp hasavsgagp grvgtgyrdr ryrdrryrvp ctstpgggil
      181 rnreplcagq rraatprsws ldpagdwhyr wislmvlpil ynwvvlilrc cfpevqeaha
      241 glwqaldgls dalylldiav hlhtgfledg ilvqdvsrtr rrylaswtfp wdvmavlpte
      301 llcllpgvpr vpgvpaaran rclrvprlfe afdrcetrta wpnvfrmakl mlylllgihw
      361 hgclylalsa rlglgadpwv cpsftrllrr ylhsfyfstl vlamvgdtpe pqreeellfl
      421 tagfllavlg fatitgsist vivnlsssat afypdagpvr rylrargvdg rlagrvvrwh
      481 qhlraqrklp aewdalqhlp rglraevaag vhlaalrrvg lfrgwehgvl rqlvlrlrpq
      541 vfgpgefvcr rgdvgremyf iregrlavva edgvtqlavl geglyfgeis linikgnmag
      601 nrrtanilsi gysdlfclgk edlaevlaef praraameak grelllrmgq ldtaaeaaal
      661 aagaeaerrl qglevalegl qtraarllaq leasalrmal rvrrlegrlq lrdragqgap
      721 raqgparepg saggqgptgv qgpskaqgph raqgpsdmqg apkaqdspmv qgplrargpr
      781 gvpagpspsr rdavtdtamv avarclksvp seppqaarpa rdsggtarpg tpraplpvls
      841 vappgphrpg lppppppppa pgppragrrp rlstggseri gasslpeppg a
//
LOCUS       XP_041326258             530 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal RNA-processing protein 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326258
VERSION     XP_041326258.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470324.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 15% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..530
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..530
                     /product="ribosomal RNA-processing protein 8"
                     /calculated_mol_wt=55925
     Region          <37..212
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          121..>330
                     /region_name="PRK12678"
                     /note="transcription termination factor Rho; Provisional"
                     /db_xref="CDD:237171"
     Region          319..530
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     Site            order(392..396,411..412,422..424,440)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..530
                     /gene="RRP8"
                     /coded_by="XM_041470324.1:1..1593"
                     /db_xref="GeneID:121355128"
ORIGIN      
        1 makcplglls trapgpapal apapaglrpa lpqlrvarsr trglpnlspl gagavpplpg
       61 acpggsagrr lrrardgaga pperlrptap ggagpgpqst vrragrgvtg raeligsavt
      121 rsgaeragrg taraaeapar ssgpqggavp aalrggstcv pvptegprsm faeqgwndaa
      181 eplprgapeg pgrphprkrr lpgtardgea arkqprkrkk aggpraaage lpagpdeprq
      241 agqrpdtdgp aepaeqsgkp aglsrrqrrn rqkrqqqqep pagsdgergs gpgppeppgp
      301 aeaapeprsg rsaalrarme erllgarfry lnqqlytgts rdaarlfrad paafhlyhrg
      361 ferqvrrwpe rpvqrivryl rrrpaslvva dfgcgdctla asvknqvhcf dlvplsprvt
      421 vcdmakvpla aesvdvavfc lalmgtnlqe ilgeanrvlk lggtllvaev asrfediraf
      481 lkamtqlgfk tvskdlsssy fyvlefaktg parpgpapgl rlrpclykrr
//
LOCUS       XP_041326259             324 aa            linear   VRT 06-MAY-2021
DEFINITION  basic proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326259
VERSION     XP_041326259.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470325.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..324
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=33123
     CDS             1..324
                     /gene="LOC121355129"
                     /coded_by="XM_041470325.1:1..975"
                     /db_xref="GeneID:121355129"
ORIGIN      
        1 mlflhpaapa srgspaagps grcrslspsp alpdvphraa svpafcqprs plrpgsqppp
       61 gastvplsal psaalpcsgt perrgrqrar sgrgsavlrr lgrvppfspa ppppaplspr
      121 rrqnkapgpg pgpvppcdda tvrgsgrgra palgltlrvp crrrshpags gpattsrslp
      181 aapaprslqh rrplqcpers gappvprppr cgcgpaersa agrrwlgags arrlllkpdp
      241 appsaprslr rppprpaper aggarprggp grasggagga pvwpgskgpg srigtekekg
      301 ldpgyrrmeg svassshnpe lkyl
//
LOCUS       XP_041326260             792 aa            linear   VRT 06-MAY-2021
DEFINITION  ribonucleoside-diphosphate reductase large subunit [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326260
VERSION     XP_041326260.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470326.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..792
                     /product="ribonucleoside-diphosphate reductase large
                     subunit"
                     /calculated_mol_wt=90292
     Region          1..792
                     /region_name="PLN02437"
                     /note="ribonucleoside--diphosphate reductase large
                     subunit"
                     /db_xref="CDD:178056"
     Site            order(202..203,217..218,247,427,429,431,446,602..607)
                     /site_type="active"
                     /db_xref="CDD:153088"
     Site            order(214,228..229,232,235..236,239..240,243,258,270,
                     274..275,277..278,281..282,285..289)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153088"
     Site            order(218,427,429,431,444,737..738)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:153088"
     Site            order(226..228,231,243,256,270,275)
                     /site_type="active"
                     /note="effector binding site [active]"
                     /db_xref="CDD:153088"
     Site            order(336,339..340,342..343,387,391,398,716..718,720..721,
                     725..726,728..729)
                     /site_type="active"
                     /note="R2 peptide binding site [active]"
                     /db_xref="CDD:153088"
     CDS             1..792
                     /gene="RRM1"
                     /coded_by="XM_041470326.1:116..2494"
                     /db_xref="GeneID:121355131"
ORIGIN      
        1 mhvvkrdgrq ervmfdkits riqklcygln adfvdpaqit mkviqglysg vttveldtla
       61 aetaatlttk hpdyailaar iavsnlhket kkvfsdvmed lytyinphng khspmisket
      121 ldivlankdr lnsaiiydrd fsynyfgfkt lersyllkin skvaerpqhm lmrvsvgihk
      181 adidaaiety nllserwfth asptlfnagt nrpqlsscfl lcmkddsieg iydtlkqcal
      241 isksaggigl avsciratgs yiagtngnsn glvpmlrvyn ntaryvdqgg nkrpgafaiy
      301 lepwhldife fldlkkntgk eeqrardlff alwipdlfmk rvetnqdwsl mcpnecpgld
      361 dvwgeefekl yesyerqgrv rrvvkaqqlw yaiiesqtet gtpymlykds cnrksnqqnl
      421 gtikcsnlct eiveytskee vavcnlasia lnmyvtpeht ydfkklaevt kvivrnlnki
      481 idinyypvpe aersnrrhrp igigvqglad afilmrfpfe saeaqrlnqh ifetiyygal
      541 eascelareq gpydtyqgsp vskgilqydm wnvtpsdlwd wkalkekiak ygvrnsllis
      601 pmptastaqi lgnnesiepy tsniytrrvl sgefqvvnph llkdltergl wneemknqii
      661 ahngsiqnip eipddlkqly ktvweisqkt ilkmaadrga fidqsqslni hiaepnygkl
      721 tsmhfygwkq glktgmyylr tkpaanpiqf tlnkeklrer ekasreeeek ernkaamvcs
      781 lenreeclmc gs
//
LOCUS       XP_041326261             158 aa            linear   VRT 06-MAY-2021
DEFINITION  40S ribosomal protein S11 [Pyrgilauda ruficollis].
ACCESSION   XP_041326261
VERSION     XP_041326261.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470327.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..158
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..158
                     /product="40S ribosomal protein S11"
                     /calculated_mol_wt=18258
     Region          1..158
                     /region_name="PTZ00241"
                     /note="40S ribosomal protein S11; Provisional"
                     /db_xref="CDD:240326"
     CDS             1..158
                     /gene="RPS11"
                     /coded_by="XM_041470327.1:99..575"
                     /db_xref="GeneID:121355132"
ORIGIN      
        1 madtqteray qkqptifqnk krvllgeggk eklpryyrnv glgfktpkea iegtyidkkc
       61 pftgnvsirg rilsgvvtkm kmqrtivirr dylhyirkyn rfekrhknms vhlspcfrdv
      121 qigdivtvge crplsktvrf nvlkvtkaag tkkqfqkf
//
LOCUS       XP_041326262             459 aa            linear   VRT 06-MAY-2021
DEFINITION  neuronal acetylcholine receptor subunit alpha-10 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326262
VERSION     XP_041326262.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470328.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..459
                     /product="neuronal acetylcholine receptor subunit
                     alpha-10"
                     /calculated_mol_wt=50934
     Region          14..455
                     /region_name="LIC"
                     /note="Cation transporter family protein; cl42365"
                     /db_xref="CDD:455710"
     Region          55..235
                     /region_name="LGIC_ECD"
                     /note="extracellular domain (ECD) of Cys-loop
                     neurotransmitter-gated ion channels (also known as
                     ligand-gated ion channel (LGIC)); cl28912"
                     /db_xref="CDD:475126"
     Site            order(65,67,73..74,81,103,105,114..115,117,119..120,
                     131..133,135,145,147,149,153,175,235)
                     /site_type="other"
                     /note="pentamer interface [polypeptide binding]"
                     /db_xref="CDD:349787"
     CDS             1..459
                     /gene="CHRNA10"
                     /coded_by="XM_041470328.1:12..1391"
                     /db_xref="GeneID:121355133"
ORIGIN      
        1 mepgarlcla lclagvlpap gcrgapgrfa ykllhelfan yssalrpved tdralnvtlk
       61 vtlaqiidmd ernqvltsyl wvrqtwldah ltwdkdeygg idsiripssy vwrpdiilyn
      121 nadehfggsm etnvvlrsdg hitwdspait kssckvdvsy fpfdgqqcrl tfgswthngn
      181 qidlrnqldt gdltdfvenv ewevlgmpat rnvitygccs epypdvtytl llrrrasfyi
      241 fnlllpcimv sflaplgfyl padsgekvsl gvtvllaltv fqllvaesmp psesvpligk
      301 yyiatmtmit astaltifim nvhhcgpgar pvppwarrli lhhmarlccv yevgescksp
      361 rrapggraaa gdaggagesp gegqvgaevr gcpwdhclch hdallrnvgy iagcfrrhra
      421 nqrrtgewkk vakvmdrffm wvfflmvflm svlvlgnaa
//
LOCUS       XP_041326264             316 aa            linear   VRT 06-MAY-2021
DEFINITION  olfactory receptor 51E2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326264
VERSION     XP_041326264.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470330.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="olfactory receptor 51E2-like"
                     /calculated_mol_wt=34107
     Region          26..300
                     /region_name="7tmA_OR51-like"
                     /note="olfactory receptor family 51 and related proteins,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15222"
                     /db_xref="CDD:320350"
     Region          27..53
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320350"
     Region          60..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320350"
     Site            order(82,85..86,98..103,105..106,109,154,156..160,196,
                     199..201,203..205,207..208,253,256..257,259..260,263,
                     271..272,274..276,279,282..283)
                     /site_type="other"
                     /note="putative ligand binding pocket [chemical binding]"
                     /db_xref="CDD:320350"
     Region          98..128
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320350"
     Region          141..162
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320350"
     Region          196..226
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320350"
     Region          233..263
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320350"
     Region          272..297
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320350"
     CDS             1..316
                     /gene="LOC121355134"
                     /coded_by="XM_041470330.1:992..1942"
                     /db_xref="GeneID:121355134"
ORIGIN      
        1 mpssnssels psfilaslpg leaahswmai plcsayvlav langavllvv raepslhapm
       61 yfflcmlaai dlalatatvp rtlcfywlgs reigfaacll qmflihtlsa vestvllama
      121 vdryvaichp lrhaavltng atakvgllav argvlfflpl pllllplpfc gprvlshsfc
      181 lhqdvmnlac anttpsvvyg ltaillvmgl davliclsyl lilravlrla awrerlkvfs
      241 tciahicvvl afyvpligls vvhrfgkdla plvhivmgnv yilvpavlnp iiygvrtkqi
      301 qrrilslihv tarapr
//
LOCUS       XP_041326265             409 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355135 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326265
VERSION     XP_041326265.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470331.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="uncharacterized protein LOC121355135 isoform X1"
                     /calculated_mol_wt=43027
     Region          109..261
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..409
                     /gene="LOC121355135"
                     /coded_by="XM_041470331.1:196..1425"
                     /db_xref="GeneID:121355135"
ORIGIN      
        1 mpahpgyqpg pppgpgpapr igpgspqplp gagpdspglq pqispaqaap avwnrqgqhr
       61 gwtdrgqish stashqpvpg mavalavala valvplaaea gkdpllnicm dakhhksqpg
      121 pegklyeqcs pwkdnaccta ntsleahkdq sylynfnwnh cgvmppkckr hfiqdtclye
      181 cspnlgpwie qadsswrrer ilhvplcred ceqwwqdckd altckenwhq gwnwatgpsg
      241 rcspgpgtca rrsgpapsat apsrgaaaaa srcgstlpra tptwpwpstt rgggdprrpt
      301 prlrratapr apcpapcccc cwpwpcccpp rgcgpggpsd psggtgtsss aclswcsapa
      361 vlldrgsssw lltrtgisla lpwgtsresl lgcgscctsv pssgrglag
//
LOCUS       XP_041326266             350 aa            linear   VRT 06-MAY-2021
DEFINITION  folate receptor gamma-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326266
VERSION     XP_041326266.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470332.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="folate receptor gamma-like isoform X2"
                     /calculated_mol_wt=38378
     Region          109..283
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..350
                     /gene="LOC121355135"
                     /coded_by="XM_041470332.1:196..1248"
                     /db_xref="GeneID:121355135"
ORIGIN      
        1 mpahpgyqpg pppgpgpapr igpgspqplp gagpdspglq pqispaqaap avwnrqgqhr
       61 gwtdrgqish stashqpvpg mavalavala valvplaaea gkdpllnicm dakhhksqpg
      121 pegklyeqcs pwkdnaccta ntsleahkdq sylynfnwnh cgvmppkckr hfiqdtclye
      181 cspnlgpwie qadsswrrer ilhvplcred ceqwwqdckd altckenwhq gwnwatgtnr
      241 cpwgsacrpf rqvfprardl cekiwsgsfs yspeprgsgr ciqmwfdpaq gnpnvavaey
      301 yawrrrsspa htaapqsdra aralpralll lllalalllp peglrpggsl
//
LOCUS       XP_041326267             329 aa            linear   VRT 06-MAY-2021
DEFINITION  folate receptor gamma-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326267
VERSION     XP_041326267.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470333.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="folate receptor gamma-like isoform X3"
                     /calculated_mol_wt=34948
     Region          29..181
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..329
                     /gene="LOC121355135"
                     /coded_by="XM_041470333.1:90..1079"
                     /db_xref="GeneID:121355135"
ORIGIN      
        1 mavalavala valvplaaea gkdpllnicm dakhhksqpg pegklyeqcs pwkdnaccta
       61 ntsleahkdq sylynfnwnh cgvmppkckr hfiqdtclye cspnlgpwie qadsswrrer
      121 ilhvplcred ceqwwqdckd altckenwhq gwnwatgpsg rcspgpgtca rrsgpapsat
      181 apsrgaaaaa srcgstlpra tptwpwpstt rgggdprrpt prlrratapr apcpapcccc
      241 cwpwpcccpp rgcgpggpsd psggtgtsss aclswcsapa vlldrgsssw lltrtgisla
      301 lpwgtsresl lgcgscctsv pssgrglag
//
LOCUS       XP_041326268             329 aa            linear   VRT 06-MAY-2021
DEFINITION  folate receptor gamma-like isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326268
VERSION     XP_041326268.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470334.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..329
                     /product="folate receptor gamma-like isoform X3"
                     /calculated_mol_wt=34948
     Region          29..181
                     /region_name="Folate_rec"
                     /note="Folate receptor family; pfam03024"
                     /db_xref="CDD:397250"
     CDS             1..329
                     /gene="LOC121355135"
                     /coded_by="XM_041470334.1:1491..2480"
                     /db_xref="GeneID:121355135"
ORIGIN      
        1 mavalavala valvplaaea gkdpllnicm dakhhksqpg pegklyeqcs pwkdnaccta
       61 ntsleahkdq sylynfnwnh cgvmppkckr hfiqdtclye cspnlgpwie qadsswrrer
      121 ilhvplcred ceqwwqdckd altckenwhq gwnwatgpsg rcspgpgtca rrsgpapsat
      181 apsrgaaaaa srcgstlpra tptwpwpstt rgggdprrpt prlrratapr apcpapcccc
      241 cwpwpcccpp rgcgpggpsd psggtgtsss aclswcsapa vlldrgsssw lltrtgisla
      301 lpwgtsresl lgcgscctsv pssgrglag
//
LOCUS       XP_041326269             147 aa            linear   VRT 06-MAY-2021
DEFINITION  hemoglobin subunit epsilon-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326269
VERSION     XP_041326269.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470335.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="hemoglobin subunit epsilon-like"
                     /calculated_mol_wt=16310
     Region          8..146
                     /region_name="Hb-beta-like"
                     /note="Hemoglobin beta, gamma, delta, epsilon, and related
                     Hb subunits; cd08925"
                     /db_xref="CDD:381262"
     Site            order(31,34..35,38,41,98,100,103,109,112..113,116..117,
                     120,123..125,128..129,132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381262"
     Site            order(32,42..43,64,67..68,71,89,93,97,99,103..104,107,142)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381262"
     CDS             1..147
                     /gene="LOC121355136"
                     /coded_by="XM_041470335.1:22..465"
                     /db_xref="GeneID:121355136"
ORIGIN      
        1 mvhwsaeekq lisslwakvn veecgaeala rllivypwtq rffsdfgnls spmaiignpk
       61 vrahgkkvlt sfgeavknld nlkgtyskls elhcdklhvd penfrllgdi lvivlaahfg
      121 keftpacqat wqklvglvah alarkyh
//
LOCUS       XP_041326270             147 aa            linear   VRT 06-MAY-2021
DEFINITION  hemoglobin subunit beta-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326270
VERSION     XP_041326270.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470336.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="hemoglobin subunit beta-like"
                     /calculated_mol_wt=16196
     Region          8..146
                     /region_name="Hb-beta-like"
                     /note="Hemoglobin beta, gamma, delta, epsilon, and related
                     Hb subunits; cd08925"
                     /db_xref="CDD:381262"
     Site            order(31,34..35,38,41,98,100,103,109,112..113,116..117,
                     120,123..125,128..129,132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381262"
     Site            order(32,42..43,64,67..68,71,89,93,97,99,103..104,107,142)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381262"
     CDS             1..147
                     /gene="LOC121355137"
                     /coded_by="XM_041470336.1:91..534"
                     /db_xref="GeneID:121355137"
ORIGIN      
        1 mvnwtaeekq litslwakvn vadcgaeala rllivypwtq rffasfgnls sptavlgnpm
       61 vrahgkkvlt sfgdavknld gikkcfaqls klhcdklhvd penfrllgdi liivlaahfg
      121 keftpacqaa wqkmvrvvah alaheyh
//
LOCUS       XP_041326271             147 aa            linear   VRT 06-MAY-2021
DEFINITION  hemoglobin subunit epsilon [Pyrgilauda ruficollis].
ACCESSION   XP_041326271
VERSION     XP_041326271.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470337.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="hemoglobin subunit epsilon"
                     /calculated_mol_wt=16333
     Region          8..146
                     /region_name="Hb-beta-like"
                     /note="Hemoglobin beta, gamma, delta, epsilon, and related
                     Hb subunits; cd08925"
                     /db_xref="CDD:381262"
     Site            order(31,34..35,38,41,98,100,103,109,112..113,116..117,
                     120,123..125,128..129,132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381262"
     Site            order(32,42..43,64,67..68,71,89,93,97,99,103..104,107,142)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381262"
     CDS             1..147
                     /gene="LOC121355138"
                     /coded_by="XM_041470337.1:1611..2054"
                     /db_xref="GeneID:121355138"
ORIGIN      
        1 mvhwsaeekq lisslwakvn veecgaeala rllivypwtq rffsdfgnls spmaiignpk
       61 vrahgkkvlt sfgeavknld nlkgtyskls elhcdklhvd penfrllgdi lvivlashlg
      121 rdfspvcqfa wqklvgvvah alahkyh
//
LOCUS       XP_041326272             147 aa            linear   VRT 06-MAY-2021
DEFINITION  hemoglobin subunit epsilon [Pyrgilauda ruficollis].
ACCESSION   XP_041326272
VERSION     XP_041326272.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470338.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="hemoglobin subunit epsilon"
                     /calculated_mol_wt=16333
     Region          8..146
                     /region_name="Hb-beta-like"
                     /note="Hemoglobin beta, gamma, delta, epsilon, and related
                     Hb subunits; cd08925"
                     /db_xref="CDD:381262"
     Site            order(31,34..35,38,41,98,100,103,109,112..113,116..117,
                     120,123..125,128..129,132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381262"
     Site            order(32,42..43,64,67..68,71,89,93,97,99,103..104,107,142)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381262"
     CDS             1..147
                     /gene="LOC121355138"
                     /coded_by="XM_041470338.1:122..565"
                     /db_xref="GeneID:121355138"
ORIGIN      
        1 mvhwsaeekq lisslwakvn veecgaeala rllivypwtq rffsdfgnls spmaiignpk
       61 vrahgkkvlt sfgeavknld nlkgtyskls elhcdklhvd penfrllgdi lvivlashlg
      121 rdfspvcqfa wqklvgvvah alahkyh
//
LOCUS       XP_041326273             147 aa            linear   VRT 06-MAY-2021
DEFINITION  hemoglobin subunit beta [Pyrgilauda ruficollis].
ACCESSION   XP_041326273
VERSION     XP_041326273.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470339.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..147
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..147
                     /product="hemoglobin subunit beta"
                     /calculated_mol_wt=16196
     Region          8..146
                     /region_name="Hb-beta-like"
                     /note="Hemoglobin beta, gamma, delta, epsilon, and related
                     Hb subunits; cd08925"
                     /db_xref="CDD:381262"
     Site            order(31,34..35,38,41,98,100,103,109,112..113,116..117,
                     120,123..125,128..129,132)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:381262"
     Site            order(32,42..43,64,67..68,71,89,93,97,99,103..104,107,142)
                     /site_type="other"
                     /note="heme binding site [chemical binding]"
                     /db_xref="CDD:381262"
     CDS             1..147
                     /gene="LOC121355140"
                     /coded_by="XM_041470339.1:79..522"
                     /db_xref="GeneID:121355140"
ORIGIN      
        1 mvqwtaeekq litslwgkvn vaecggeala rllivypwtq rffasfgnls sptavlgnpk
       61 vqahgkkvlt sfgeavknld gikntfsqls elhcdklhvd penfrllgdi lvivlaahfg
      121 kdftpdcqaa wqklvrvvah alarkyh
//
LOCUS       XP_041326274            3266 aa            linear   VRT 06-MAY-2021
DEFINITION  protocadherin-16 [Pyrgilauda ruficollis].
ACCESSION   XP_041326274
VERSION     XP_041326274.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470340.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3266
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3266
                     /product="protocadherin-16"
                     /calculated_mol_wt=350465
     Region          34..123
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(38..39,92,94,119,121..122)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          133..235
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(138..139,198,200,231,233..234)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          244..342
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(250..251,305,307,338,340..341)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          358..452
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(361..362,415,417,448,450..451)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          460..559
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(467..468,522,524,555,557..558)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          568..666
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(574..575,630,633,662,664..665)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          674..766
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          779..874
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(786..787,838,840,870,872..873)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          884..978
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(889..890,941,943,974,976..977)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          986..1087
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(993..994,1045,1047,1083,1085..1086)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1096..1190
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1102..1103,1153,1155,1186,1188..1189)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1202..1293
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1313..1401
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1313..1314,1364,1366,1398,1400..1401)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1410..1512
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1417..1418,1472,1474,1508,1510..1511)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1519..1615
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1526..1527,1579,1581,1612,1614..1615)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1624..1718
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1631..1632,1681,1683,1714,1716..1717)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1728..1822
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(1733..1734,1785,1787,1818,1820..1821)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          1830..>1907
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          1935..2025
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Region          2041..2133
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2045..2046,2099,2101,2129,2131..2132)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2142..2239
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2148..2149,2202,2204,2235,2237..2238)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2248..2339
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2253..2254,2305,2307,2335,2337..2338)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2348..2443
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2354..2355,2405,2407,2439,2441..2442)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2452..2559
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2458..2459,2522,2524,2555,2557..2558)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2567..2663
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2574..2575,2627,2629,2659,2661..2662)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2671..2773
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(2678..2679,2739,2741,2770,2772..2773)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          2782..2880
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..3266
                     /gene="DCHS1"
                     /coded_by="XM_041470340.1:502..10302"
                     /db_xref="GeneID:121355141"
ORIGIN      
        1 meqmkrstml llellilggl ragmgsavlg tldlqideeq pagtiigdis aglppetsay
       61 myfisaqegs gvstdlgide ntgiiktarv ldretrdrys fiavtpegit vevniqvndi
      121 ndhapafpkq hstfqipeht pigsrfpldp afdadsglln tqgymikggn vgqafrletr
      181 rgpngvlyld lvvsnvldre nrssysllle aydggspprs tqmtldvsiq dindnapsfn
      241 qsryhtlise nlkpgssilq vfasdadegd ngdviyeinr rqsdpdqyft idartgvikl
      301 nkgldyevrk vhelvvqard kavhpevtta fvtihvrdyn dnqptmtiif lsedgspqis
      361 egaqpgqyva risvsdpdyg eysnvnvtle ggdgkfaltt kdniiylicv dqlldreerd
      421 sydlrvtatd sgtpplraes afvlqvmdvn dnpplfdqqe ykqsipevvy pgsfvlqvta
      481 rdkdqgpnge vrysilhgrd thsswftidp atgiittaap ldyekdpqpr ltvlatdrgt
      541 palsssavvh valqdvndne pvfrsnfynv slkentpvgt cflqvtatda dsgafgslsy
      601 sigsgigsii ptqfsidkhs gqlctvqpld rdegtsaydf titavdgggl nsmvyvkvfl
      661 edtndnrpvf ypleyaasis tqsmpgtavl rvtahdkdeg lngrvtyriv lgnspplfsl
      721 nkdtgvisls wslsgkantl vqlvisaqdg gglqaqpnar vnisivegtv sppvfeqaqy
      781 ffsvpedmpq gatvgavqaq nppghaddif ysissgdphg yfsidsasgq lhtslpldhe
      841 sqavlildvq arsgsppays ntrvkisvsd vndnmpafpt psdsillpea tepgttvytl
      901 qaedrdsgan gqvtfelvsg gegtfvvera sgavrllgal qyeatsaysl aivardggip
      961 qlsstftllv hvqaeddngp ifdtltyrve vqegvpvstr flqvralahd vestaltyhl
     1021 radgdaasfg ivpesgwlyv ksaldretrd lyvltvlasv ggtgaaadmr ktgtstvris
     1081 itdendnspr lseeryfftv senqapgstv grvmasdrda gqnsrltyrl lqhdpnflih
     1141 tqtgelstkh sldreqqsnf qllvivqdgg apprsatgti yvtvldendn apaflhvgsg
     1201 qeltvqvlee kpsgllvasl qakdpdegen gtiiysliga waerftlhva tgelrtatvl
     1261 rraeraeyif tvtasdraaa prstsaivrv qvlpssrvlp rpdatvltlh plegvkpgsv
     1321 igsvapldap argqltytvv ggggdgtfvv dsvtgdiyaa reldyeagar hvlqvsaedt
     1381 qhgypssrlv lvhihvqdcn dqaptfpedp itivvpenaq agssiftfqa ldgdgvgpns
     1441 qvryallhle ppgapfqldg rsgqltlrqg ldreaaasfl lvveatdqar nvsqrrsaav
     1501 tarvfvtden dnvpvflspa tvsvmedqpt gfvalhvvaq dsdlgengrv syslragnad
     1561 grfhlnpstg alsivralnr eevaqhnltv vatdhgfprl satqllsvlv ldvndespvf
     1621 ekpeyeahim enlpagspvl qvlatdrdlg angqvsyggl sggpfsihpq tglivttrpl
     1681 dreeqeqhvl tvyardaglp psltkatvwv tvgdendhap hlesescsve vpenqsrval
     1741 ytlratdpdg gengrleyrv aggdpgqdfs ldpvsgvlst ahaldreqta syslivvvqd
     1801 hgspprsatm svtvqvldln dnapsfaqas ytvevpedlp vgalvlqlva edpdegtngq
     1861 vsyylgnesl gmfqvepesg rirsaqaldr erqptysfla kavdsapwep ksaavrvtvv
     1921 vrdvndhvpa flhspltvnl srhtplkqvv atmraedrda ganasilyrf atpssafain
     1981 sytgdiqllq plgslsqrqr tlfvlamdlg qpalsstgvv vihvqeepyr glrfprstsd
     2041 valaenaapg tevasvqamh tggssghity siisgneknt fliqpssgai svqdsssldf
     2101 easprlrlvi qaetaasfgf mainlnlqdv ndnlprfqlq nyvafiwesq sydspviqvl
     2161 addldqgvng qvtyainqsl pmpglyhidp qtgtittaai ldreiwsqtr lvvtamdrgt
     2221 pplmgsatlt vvvmdindns ptipipweir vpentllgtq iaqltgndvd sgpalsytll
     2281 legdvadtfg vlrygghial tgpldheqrs rytltlrasd trheteanlt vlvedvndnv
     2341 ptftqvfyqv llpehtpags viltvsatdp dsgsngditf hlavpspdva idpsngtlft
     2401 trqvefnasq ptldlvvear dhgspslssw atvqlqvldv ndhsprfqep cynasvpedl
     2461 rpgttvlmle agdadlsren agfdytivsg nggnafqves rvaraggqlr mqgalvlves
     2521 ldfeaipvyn ltvaasdrgl pqrsatvpvl itvqdvndnp pvfsraeyra avseaalpgt
     2581 ellrvaahda dsgprgrvhy tissgdqhgl fqlhestgal slarpldrea qalhtlvvra
     2641 tdtpgghfal vpvaievkdi ndnkpyfpve vlsasirenl ppgtlvttlr avdadtgafg
     2701 elryvvleqa vgdpstgdgr dafavngssg elrsrltfdy erakafqllv ratdagnasa
     2761 tvtvrvlvtg edeydpifls psfnfevpeg arkgqsigrv latdedegvd gvvlytlakp
     2821 spyfainqtt gsiylrvdsq pqagagrakr epremslevq arsplpasrv asaqvtidvt
     2881 htsfglapdl nlllvavaas lgvvvvlaav aivlalvrsr qrrghkkaeg egtlaraqsg
     2941 slqklgreep alpgaehiyh qalpgygtep agpytrggsl dpshssgrgs aeaaeddeir
     3001 mineyprvas itasmqehia argpdsgiqq dadqlsdisc epaalesaqw fkskkgsgll
     3061 lpgpplqlyr edgggsaflg vrcglsvssq pqdyafpedg kpsvegslta ivasdeelrg
     3121 synwdyllnw cpqfqplasv fteiarlkde sslrkpfpak pkaepkprid ppplitsvah
     3181 pgaksvppkp ppgrtfphps slrrspishe gsisssamsp sfspslspla arspvvspfg
     3241 isqgpsasti saehsleppe eaelri
//
LOCUS       XP_041326276             730 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326276
VERSION     XP_041326276.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470342.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="tripartite motif-containing protein 3"
                     /calculated_mol_wt=80037
     Region          15..62
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(21,24,36,38,41,44,58,61)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          109..156
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          161..282
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cd20482"
                     /db_xref="CDD:467844"
     Site            order(165,168..169,171..173,176,179,193..194,197,200..201,
                     204..205,208,215..216,219,222..223,226..227,230,240..241,
                     244,248,251..252,255..256,258..259,267,270..271,274,
                     277..278)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467844"
     Region          325..422
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..696
                     /region_name="NHL_TRIM2_like"
                     /note="NHL repeat domain of the tripartite
                     motif-containing protein 2 (TRIM2) and related proteins;
                     cd14960"
                     /db_xref="CDD:271330"
     Region          489..528
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          536..575
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          578..615
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          622..663
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     CDS             1..730
                     /gene="TRIM3"
                     /coded_by="XM_041470342.1:447..2639"
                     /db_xref="GeneID:121355142"
ORIGIN      
        1 marhepaspv vrqidqqfli csicldrycn pkvlpclhtf cerclqnyip aqslslscpv
       61 crqtsilper gvpalpnnff itnlmevlqr dpdprgappa plpplgaatg qplccpnheg
      121 kvmefycepc etamcrecte gerrehrdhr tvplrdvleq hkaalqhqld avrarlpqla
      181 aavglvaeis rqlgqrraea eaeigssfee leaalrqrre vllrdleatc aakqqvleaq
      241 levlrqgqes ilsscafteq alhhgsatev llvqkqmger lrelaarpfp ehphenaqle
      301 fhaepeglrr siqnlgallt tsatahttva tgeglrqavv gqpcslsvtt kdkdgalvrs
      361 ggarlrfavt gpdgaaaeae vqdnrngtye lvytprtegd fvlsillygq pvrgspfrar
      421 alrpsdvpps peeakrrvks pggghvrqka lrrpasmygs akrkenpied elifrvgsrg
      481 rekgeftnlq gistssagri vvadsnnqcv qvfsnegqfr lrfgvrgrsp gqlqrptgvs
      541 vdtngdiiva dydnrwvsvf spegkfktkl gagrlmgpkg vavdrnghii vvdnkaccvf
      601 ifqpngklva rfgsrgtaer qfagphfvav nnkneivvtd fhnhsvkvyn aegeflfkfg
      661 shgegngqfn aptgvavdsn gniivadwgn sriqvphlcp yghlcctdtr tpvpahlclc
      721 lhrhlclylh
//
LOCUS       XP_041326277             730 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326277
VERSION     XP_041326277.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470343.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="tripartite motif-containing protein 3"
                     /calculated_mol_wt=80037
     Region          15..62
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(21,24,36,38,41,44,58,61)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          109..156
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          161..282
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cd20482"
                     /db_xref="CDD:467844"
     Site            order(165,168..169,171..173,176,179,193..194,197,200..201,
                     204..205,208,215..216,219,222..223,226..227,230,240..241,
                     244,248,251..252,255..256,258..259,267,270..271,274,
                     277..278)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467844"
     Region          325..422
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..696
                     /region_name="NHL_TRIM2_like"
                     /note="NHL repeat domain of the tripartite
                     motif-containing protein 2 (TRIM2) and related proteins;
                     cd14960"
                     /db_xref="CDD:271330"
     Region          489..528
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          536..575
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          578..615
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          622..663
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     CDS             1..730
                     /gene="TRIM3"
                     /coded_by="XM_041470343.1:164..2356"
                     /db_xref="GeneID:121355142"
ORIGIN      
        1 marhepaspv vrqidqqfli csicldrycn pkvlpclhtf cerclqnyip aqslslscpv
       61 crqtsilper gvpalpnnff itnlmevlqr dpdprgappa plpplgaatg qplccpnheg
      121 kvmefycepc etamcrecte gerrehrdhr tvplrdvleq hkaalqhqld avrarlpqla
      181 aavglvaeis rqlgqrraea eaeigssfee leaalrqrre vllrdleatc aakqqvleaq
      241 levlrqgqes ilsscafteq alhhgsatev llvqkqmger lrelaarpfp ehphenaqle
      301 fhaepeglrr siqnlgallt tsatahttva tgeglrqavv gqpcslsvtt kdkdgalvrs
      361 ggarlrfavt gpdgaaaeae vqdnrngtye lvytprtegd fvlsillygq pvrgspfrar
      421 alrpsdvpps peeakrrvks pggghvrqka lrrpasmygs akrkenpied elifrvgsrg
      481 rekgeftnlq gistssagri vvadsnnqcv qvfsnegqfr lrfgvrgrsp gqlqrptgvs
      541 vdtngdiiva dydnrwvsvf spegkfktkl gagrlmgpkg vavdrnghii vvdnkaccvf
      601 ifqpngklva rfgsrgtaer qfagphfvav nnkneivvtd fhnhsvkvyn aegeflfkfg
      661 shgegngqfn aptgvavdsn gniivadwgn sriqvphlcp yghlcctdtr tpvpahlclc
      721 lhrhlclylh
//
LOCUS       XP_041326278             730 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326278
VERSION     XP_041326278.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470344.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="tripartite motif-containing protein 3"
                     /calculated_mol_wt=80037
     Region          15..62
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(21,24,36,38,41,44,58,61)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          109..156
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          161..282
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cd20482"
                     /db_xref="CDD:467844"
     Site            order(165,168..169,171..173,176,179,193..194,197,200..201,
                     204..205,208,215..216,219,222..223,226..227,230,240..241,
                     244,248,251..252,255..256,258..259,267,270..271,274,
                     277..278)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467844"
     Region          325..422
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..696
                     /region_name="NHL_TRIM2_like"
                     /note="NHL repeat domain of the tripartite
                     motif-containing protein 2 (TRIM2) and related proteins;
                     cd14960"
                     /db_xref="CDD:271330"
     Region          489..528
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          536..575
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          578..615
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          622..663
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     CDS             1..730
                     /gene="TRIM3"
                     /coded_by="XM_041470344.1:67..2259"
                     /db_xref="GeneID:121355142"
ORIGIN      
        1 marhepaspv vrqidqqfli csicldrycn pkvlpclhtf cerclqnyip aqslslscpv
       61 crqtsilper gvpalpnnff itnlmevlqr dpdprgappa plpplgaatg qplccpnheg
      121 kvmefycepc etamcrecte gerrehrdhr tvplrdvleq hkaalqhqld avrarlpqla
      181 aavglvaeis rqlgqrraea eaeigssfee leaalrqrre vllrdleatc aakqqvleaq
      241 levlrqgqes ilsscafteq alhhgsatev llvqkqmger lrelaarpfp ehphenaqle
      301 fhaepeglrr siqnlgallt tsatahttva tgeglrqavv gqpcslsvtt kdkdgalvrs
      361 ggarlrfavt gpdgaaaeae vqdnrngtye lvytprtegd fvlsillygq pvrgspfrar
      421 alrpsdvpps peeakrrvks pggghvrqka lrrpasmygs akrkenpied elifrvgsrg
      481 rekgeftnlq gistssagri vvadsnnqcv qvfsnegqfr lrfgvrgrsp gqlqrptgvs
      541 vdtngdiiva dydnrwvsvf spegkfktkl gagrlmgpkg vavdrnghii vvdnkaccvf
      601 ifqpngklva rfgsrgtaer qfagphfvav nnkneivvtd fhnhsvkvyn aegeflfkfg
      661 shgegngqfn aptgvavdsn gniivadwgn sriqvphlcp yghlcctdtr tpvpahlclc
      721 lhrhlclylh
//
LOCUS       XP_041326279             730 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326279
VERSION     XP_041326279.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470345.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="tripartite motif-containing protein 3"
                     /calculated_mol_wt=80037
     Region          15..62
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(21,24,36,38,41,44,58,61)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          109..156
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          161..282
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cd20482"
                     /db_xref="CDD:467844"
     Site            order(165,168..169,171..173,176,179,193..194,197,200..201,
                     204..205,208,215..216,219,222..223,226..227,230,240..241,
                     244,248,251..252,255..256,258..259,267,270..271,274,
                     277..278)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467844"
     Region          325..422
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..696
                     /region_name="NHL_TRIM2_like"
                     /note="NHL repeat domain of the tripartite
                     motif-containing protein 2 (TRIM2) and related proteins;
                     cd14960"
                     /db_xref="CDD:271330"
     Region          489..528
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          536..575
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          578..615
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          622..663
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     CDS             1..730
                     /gene="TRIM3"
                     /coded_by="XM_041470345.1:78..2270"
                     /db_xref="GeneID:121355142"
ORIGIN      
        1 marhepaspv vrqidqqfli csicldrycn pkvlpclhtf cerclqnyip aqslslscpv
       61 crqtsilper gvpalpnnff itnlmevlqr dpdprgappa plpplgaatg qplccpnheg
      121 kvmefycepc etamcrecte gerrehrdhr tvplrdvleq hkaalqhqld avrarlpqla
      181 aavglvaeis rqlgqrraea eaeigssfee leaalrqrre vllrdleatc aakqqvleaq
      241 levlrqgqes ilsscafteq alhhgsatev llvqkqmger lrelaarpfp ehphenaqle
      301 fhaepeglrr siqnlgallt tsatahttva tgeglrqavv gqpcslsvtt kdkdgalvrs
      361 ggarlrfavt gpdgaaaeae vqdnrngtye lvytprtegd fvlsillygq pvrgspfrar
      421 alrpsdvpps peeakrrvks pggghvrqka lrrpasmygs akrkenpied elifrvgsrg
      481 rekgeftnlq gistssagri vvadsnnqcv qvfsnegqfr lrfgvrgrsp gqlqrptgvs
      541 vdtngdiiva dydnrwvsvf spegkfktkl gagrlmgpkg vavdrnghii vvdnkaccvf
      601 ifqpngklva rfgsrgtaer qfagphfvav nnkneivvtd fhnhsvkvyn aegeflfkfg
      661 shgegngqfn aptgvavdsn gniivadwgn sriqvphlcp yghlcctdtr tpvpahlclc
      721 lhrhlclylh
//
LOCUS       XP_041326280             730 aa            linear   VRT 06-MAY-2021
DEFINITION  tripartite motif-containing protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326280
VERSION     XP_041326280.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470346.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..730
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..730
                     /product="tripartite motif-containing protein 3"
                     /calculated_mol_wt=80037
     Region          15..62
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(21,24,36,38,41,44,58,61)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438111"
     Region          109..156
                     /region_name="Bbox_SF"
                     /note="B-box-type zinc finger superfamily; cl00034"
                     /db_xref="CDD:469587"
     Region          161..282
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cd20482"
                     /db_xref="CDD:467844"
     Site            order(165,168..169,171..173,176,179,193..194,197,200..201,
                     204..205,208,215..216,219,222..223,226..227,230,240..241,
                     244,248,251..252,255..256,258..259,267,270..271,274,
                     277..278)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:467844"
     Region          325..422
                     /region_name="IG_FLMN"
                     /note="Filamin-type immunoglobulin domains; smart00557"
                     /db_xref="CDD:214720"
     Region          471..696
                     /region_name="NHL_TRIM2_like"
                     /note="NHL repeat domain of the tripartite
                     motif-containing protein 2 (TRIM2) and related proteins;
                     cd14960"
                     /db_xref="CDD:271330"
     Region          489..528
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          536..575
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          578..615
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     Region          622..663
                     /region_name="NHL repeat"
                     /note="NHL repeat [structural motif]"
                     /db_xref="CDD:271330"
     CDS             1..730
                     /gene="TRIM3"
                     /coded_by="XM_041470346.1:42..2234"
                     /db_xref="GeneID:121355142"
ORIGIN      
        1 marhepaspv vrqidqqfli csicldrycn pkvlpclhtf cerclqnyip aqslslscpv
       61 crqtsilper gvpalpnnff itnlmevlqr dpdprgappa plpplgaatg qplccpnheg
      121 kvmefycepc etamcrecte gerrehrdhr tvplrdvleq hkaalqhqld avrarlpqla
      181 aavglvaeis rqlgqrraea eaeigssfee leaalrqrre vllrdleatc aakqqvleaq
      241 levlrqgqes ilsscafteq alhhgsatev llvqkqmger lrelaarpfp ehphenaqle
      301 fhaepeglrr siqnlgallt tsatahttva tgeglrqavv gqpcslsvtt kdkdgalvrs
      361 ggarlrfavt gpdgaaaeae vqdnrngtye lvytprtegd fvlsillygq pvrgspfrar
      421 alrpsdvpps peeakrrvks pggghvrqka lrrpasmygs akrkenpied elifrvgsrg
      481 rekgeftnlq gistssagri vvadsnnqcv qvfsnegqfr lrfgvrgrsp gqlqrptgvs
      541 vdtngdiiva dydnrwvsvf spegkfktkl gagrlmgpkg vavdrnghii vvdnkaccvf
      601 ifqpngklva rfgsrgtaer qfagphfvav nnkneivvtd fhnhsvkvyn aegeflfkfg
      661 shgegngqfn aptgvavdsn gniivadwgn sriqvphlcp yghlcctdtr tpvpahlclc
      721 lhrhlclylh
//
LOCUS       XP_041326281             676 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/WD repeat-containing protein 7-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326281
VERSION     XP_041326281.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470347.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..676
                     /product="F-box/WD repeat-containing protein 7-like
                     isoform X1"
                     /calculated_mol_wt=75479
     Region          233..291
                     /region_name="F-box_FBXW7"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 7 (FBXW7) and similar proteins; cd22133"
                     /db_xref="CDD:438905"
     Site            order(246..249,252..254,257,260..262,264..265,268..269,
                     271..278,280..281)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438905"
     Region          343..619
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(348,365,369,375..376,388..389,405,409,415..416,
                     428..429,444,449,455..456,469,484,489,495..496,508..509,
                     525,529,535..536,548..549,564,569,575..576,588,592,608,
                     612,618..619)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          353..388
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          394..428
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          433..467
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          474..507
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          513..547
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          555..587
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          596..618
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..676
                     /gene="LOC121355143"
                     /coded_by="XM_041470347.1:1299..3329"
                     /db_xref="GeneID:121355143"
ORIGIN      
        1 mtcrrcpgpe gpprasptpl gdsedhrapa aqvvaeeeee eeeeeapgpw eperpwkgtp
       61 rsgadpdgsg grgpqepprs treeeeddee eeeegsccse egedssnvyl yytlgerwid
      121 ylqrtgdggl lrhlrpkmkr ksengpdgra lspgkklckg sdygrtlgpc tpsptttfgd
      181 lrnakvgqar rrcipsvapp pelqdwlrtf qrwsgpekll aldelidrce paqikymmqv
      241 iepqfqrdfi sllpkelaly vlsfleprdl lraaqtcryw rvlaednllw rekcreegie
      301 eplhlrkrrl lspgfmyspw kfaflrqhri dmnwrsgelr ppkvlkghdd hvitclqfcg
      361 nrivsgsddn tlkvwsavtg ecvqtlvght ggvwssqmrd sivisgstdr tlkvwnadsg
      421 ecvhtlyght stvrcmhlhg nrvvsgsrda tlrlwdietg qclhvlmghv aavrcvqydg
      481 nkvvsgaydy tvkvwdpese scthtlqght nrvyslqfdg thivsgsldt sirvwdvesg
      541 nclhtlmghq sltsgmelrd nilvsgnads tvkiwdiktg qclqtlqgps khqsavtclq
      601 fsskfvvtss ddgtvklwdl ktgefvrnlv alesggsggv vwrirasntk lvcavgsrng
      661 teetkllvld fdvdlk
//
LOCUS       XP_041326282             539 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box/WD repeat-containing protein 7-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326282
VERSION     XP_041326282.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470348.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..539
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..539
                     /product="F-box/WD repeat-containing protein 7-like
                     isoform X2"
                     /calculated_mol_wt=60230
     Region          96..154
                     /region_name="F-box_FBXW7"
                     /note="F-box domain found in F-box/WD repeat-containing
                     protein 7 (FBXW7) and similar proteins; cd22133"
                     /db_xref="CDD:438905"
     Site            order(109..112,115..117,120,123..125,127..128,131..132,
                     134..141,143..144)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438905"
     Region          143..524
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          216..251
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          257..291
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          296..330
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          337..370
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          376..410
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          418..450
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          459..481
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..539
                     /gene="LOC121355143"
                     /coded_by="XM_041470348.1:129..1748"
                     /db_xref="GeneID:121355143"
ORIGIN      
        1 mkrksengpd gralspgkkl ckgsdygrtl gpctpspttt fgdlrnakvg qarrrcipsv
       61 apppelqdwl rtfqrwsgpe kllaldelid rcepaqikym mqviepqfqr dfisllpkel
      121 alyvlsflep rdllraaqtc rywrvlaedn llwrekcree gieeplhlrk rrllspgfmy
      181 spwkfaflrq hridmnwrsg elrppkvlkg hddhvitclq fcgnrivsgs ddntlkvwsa
      241 vtgecvqtlv ghtggvwssq mrdsivisgs tdrtlkvwna dsgecvhtly ghtstvrcmh
      301 lhgnrvvsgs rdatlrlwdi etgqclhvlm ghvaavrcvq ydgnkvvsga ydytvkvwdp
      361 esescthtlq ghtnrvyslq fdgthivsgs ldtsirvwdv esgnclhtlm ghqsltsgme
      421 lrdnilvsgn adstvkiwdi ktgqclqtlq gpskhqsavt clqfsskfvv tssddgtvkl
      481 wdlktgefvr nlvalesggs ggvvwriras ntklvcavgs rngteetkll vldfdvdlk
//
LOCUS       XP_041326283             572 aa            linear   VRT 06-MAY-2021
DEFINITION  tripeptidyl-peptidase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326283
VERSION     XP_041326283.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470349.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..572
                     /product="tripeptidyl-peptidase 1"
                     /calculated_mol_wt=62289
     Region          38..174
                     /region_name="Pro-peptidase_S53"
                     /note="Activation domain of S53 peptidases; cd11377"
                     /db_xref="CDD:206778"
     Site            order(54,56..57,59,65..66,69,83..84,86,89,170..171,
                     173..174)
                     /site_type="other"
                     /note="peptidase domain interface [polypeptide binding]"
                     /db_xref="CDD:206778"
     Region          204..566
                     /region_name="Peptidases_S53"
                     /note="Peptidase domain in the S53 family; cd04056"
                     /db_xref="CDD:173788"
     Site            order(276,280,328..331,361,363..364,480)
                     /site_type="active"
                     /db_xref="CDD:173788"
     Site            order(276,280,480)
                     /site_type="active"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:173788"
     Site            order(526..527,548,552)
                     /site_type="other"
                     /note="calcium binding site [ion binding]"
                     /db_xref="CDD:173788"
     CDS             1..572
                     /gene="TPP1"
                     /coded_by="XM_041470349.1:94..1812"
                     /db_xref="GeneID:121355144"
ORIGIN      
        1 margcwgipa vlalcaaaws casglalerd qpfrvppgwa hagrvdaghp vqltfalrqr
       61 gtaqlarlvq avsdprspry gqylsleqvr dlvqpspatl mtvlkwlqgh gvedcrsvtt
      121 ldflecylpa staerllpga efhryvqgqh slvrsplpyt vpaelaehld fvggmhrfpt
      181 erkagsrara rkdpqlaras fhlgvtpavl rqrynmtggd vgllpnnsqa caqfleqyfh
      241 qadlaefmql fgsgfahrtq vdrvvghqgr gkagleasld veyimstgan vstwvfsnag
      301 rhesqepfla wllllsnmsa vpwvhsvsyg ddedslsyay mervntelmk aaargltilf
      361 asgddgagcr rehsgnhtfr psfpasspyv ttvggtsfkn pflvteevtd yisgggfsni
      421 fpmpeyqaaa vgrflrsask lppssyynss graypdlaal sdnywvvtnr iplpwvsgts
      481 astpvvagmv alindrrlqr glaplgflnp alyqlqkqgh gdafydviqg chlscldgtv
      541 qgqgfcatpa wdpvtgwgtp nfprllralg pr
//
LOCUS       XP_041326284             463 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin-linked protein kinase isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326284
VERSION     XP_041326284.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470350.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..463
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..463
                     /product="integrin-linked protein kinase isoform X1"
                     /calculated_mol_wt=52324
     Region          <19..167
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(44,46,50..51,54..56,58..59,63,66,75,77,79,83..84,
                     87..89,91..92,96,99,108,110,112,116..117,120..122,
                     124..125,129,132,141)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          44..75
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          77..108
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          110..141
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          208..460
                     /region_name="PK_ILK"
                     /note="Pseudokinase domain of Integrin Linked Kinase;
                     cd14057"
                     /db_xref="CDD:270959"
     Site            order(211,213..215,218,229,231,280..283,290,334,337,350,
                     352)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270959"
     Site            order(236,359..362,372..375,407..410,412..414,417)
                     /site_type="other"
                     /note="Parvin interface [polypeptide binding]"
                     /db_xref="CDD:270959"
     CDS             1..463
                     /gene="ILK"
                     /coded_by="XM_041470350.1:248..1639"
                     /db_xref="GeneID:121355145"
ORIGIN      
        1 mslptsppaa amddiftqcr egnavavrlw ldntendlnq gddhgfsplh wacregrsnv
       61 vdmlimrgar invmnrgddt plhlaashgh rdivqklmqf kadinavneh gntplhyacf
      121 wgheqvaedl vgsgalvsia nkygetptdk aktplrevlk eraeklgqsl tkipykdtfw
      181 kgttrtrprn gtlnklagid fkqlslshkl nenqsgelwk grwqgndivi kmlkirdwtt
      241 rksrdfneey pklrifshpn vlpvlgacqa ppaphpivis hwmpygslyn vlhegtnfvv
      301 dqmqavkfaf diargmaflh tlepliprhh lnsrsvmide dmtarismad vkfsfqcpgr
      361 myapawvape alqkkpeein rrsadmwsfa vllwelvtre vpfadlsnme igmkvalegl
      421 rptippgisp hicklmkicm nedpakrpkf dmivpilekm qek
//
LOCUS       XP_041326285             452 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin-linked protein kinase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326285
VERSION     XP_041326285.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470351.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..452
                     /product="integrin-linked protein kinase isoform X2"
                     /calculated_mol_wt=51299
     Region          <8..156
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(33,35,39..40,43..45,47..48,52,55,64,66,68,72..73,
                     76..78,80..81,85,88,97,99,101,105..106,109..111,113..114,
                     118,121,130)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          33..64
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          66..97
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          99..130
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          197..449
                     /region_name="PK_ILK"
                     /note="Pseudokinase domain of Integrin Linked Kinase;
                     cd14057"
                     /db_xref="CDD:270959"
     Site            order(200,202..204,207,218,220,269..272,279,323,326,339,
                     341)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270959"
     Site            order(225,348..351,361..364,396..399,401..403,406)
                     /site_type="other"
                     /note="Parvin interface [polypeptide binding]"
                     /db_xref="CDD:270959"
     CDS             1..452
                     /gene="ILK"
                     /coded_by="XM_041470351.1:111..1469"
                     /db_xref="GeneID:121355145"
ORIGIN      
        1 mddiftqcre gnavavrlwl dntendlnqg ddhgfsplhw acregrsnvv dmlimrgari
       61 nvmnrgddtp lhlaashghr divqklmqfk adinavnehg ntplhyacfw gheqvaedlv
      121 gsgalvsian kygetptdka ktplrevlke raeklgqslt kipykdtfwk gttrtrprng
      181 tlnklagidf kqlslshkln enqsgelwkg rwqgndivik mlkirdwttr ksrdfneeyp
      241 klrifshpnv lpvlgacqap paphpivish wmpygslynv lhegtnfvvd qmqavkfafd
      301 iargmaflht lepliprhhl nsrsvmided mtarismadv kfsfqcpgrm yapawvapea
      361 lqkkpeeinr rsadmwsfav llwelvtrev pfadlsnmei gmkvaleglr ptippgisph
      421 icklmkicmn edpakrpkfd mivpilekmq ek
//
LOCUS       XP_041326286             452 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin-linked protein kinase isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326286
VERSION     XP_041326286.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470352.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..452
                     /product="integrin-linked protein kinase isoform X2"
                     /calculated_mol_wt=51299
     Region          <8..156
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(33,35,39..40,43..45,47..48,52,55,64,66,68,72..73,
                     76..78,80..81,85,88,97,99,101,105..106,109..111,113..114,
                     118,121,130)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          33..64
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          66..97
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          99..130
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          197..449
                     /region_name="PK_ILK"
                     /note="Pseudokinase domain of Integrin Linked Kinase;
                     cd14057"
                     /db_xref="CDD:270959"
     Site            order(200,202..204,207,218,220,269..272,279,323,326,339,
                     341)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270959"
     Site            order(225,348..351,361..364,396..399,401..403,406)
                     /site_type="other"
                     /note="Parvin interface [polypeptide binding]"
                     /db_xref="CDD:270959"
     CDS             1..452
                     /gene="ILK"
                     /coded_by="XM_041470352.1:60..1418"
                     /db_xref="GeneID:121355145"
ORIGIN      
        1 mddiftqcre gnavavrlwl dntendlnqg ddhgfsplhw acregrsnvv dmlimrgari
       61 nvmnrgddtp lhlaashghr divqklmqfk adinavnehg ntplhyacfw gheqvaedlv
      121 gsgalvsian kygetptdka ktplrevlke raeklgqslt kipykdtfwk gttrtrprng
      181 tlnklagidf kqlslshkln enqsgelwkg rwqgndivik mlkirdwttr ksrdfneeyp
      241 klrifshpnv lpvlgacqap paphpivish wmpygslynv lhegtnfvvd qmqavkfafd
      301 iargmaflht lepliprhhl nsrsvmided mtarismadv kfsfqcpgrm yapawvapea
      361 lqkkpeeinr rsadmwsfav llwelvtrev pfadlsnmei gmkvaleglr ptippgisph
      421 icklmkicmn edpakrpkfd mivpilekmq ek
//
LOCUS       XP_041326287             391 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin-linked protein kinase isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326287
VERSION     XP_041326287.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470353.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..391
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..391
                     /product="integrin-linked protein kinase isoform X3"
                     /calculated_mol_wt=44386
     Region          <8..>117
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(33,35,39..40,43..45,47..48,52,55,64,66,68,72..73,
                     76..78,80..81,85,88,97,99,101,105..106,109..111,113..114)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          33..64
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          66..97
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          144..388
                     /region_name="PK_ILK"
                     /note="Pseudokinase domain of Integrin Linked Kinase;
                     cd14057"
                     /db_xref="CDD:270959"
     Site            order(164,287..290,300..303,335..338,340..342,345)
                     /site_type="other"
                     /note="Parvin interface [polypeptide binding]"
                     /db_xref="CDD:270959"
     CDS             1..391
                     /gene="ILK"
                     /coded_by="XM_041470353.1:6..1181"
                     /db_xref="GeneID:121355145"
ORIGIN      
        1 mddiftqcre gnavavrlwl dntendlnqg ddhgfsplhw acregrsnvv dmlimrgari
       61 nvmnrgddtp lhlaashghr divqklmqfk adinavnehg ntplhyacfw gheqvaesvl
      121 rswarasprs ptrtpsgraq papgplwkgr wqgndivikm lkirdwttrk srdfneeypk
      181 lrifshpnvl pvlgacqapp aphpivishw mpygslynvl hegtnfvvdq mqavkfafdi
      241 argmaflhtl epliprhhln srsvmidedm tarismadvk fsfqcpgrmy apawvapeal
      301 qkkpeeinrr sadmwsfavl lwelvtrevp fadlsnmeig mkvaleglrp tippgisphi
      361 cklmkicmne dpakrpkfdm ivpilekmqe k
//
LOCUS       XP_041326288             381 aa            linear   VRT 06-MAY-2021
DEFINITION  arfaptin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326288
VERSION     XP_041326288.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470354.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="arfaptin-2 isoform X1"
                     /calculated_mol_wt=41639
     Region          163..363
                     /region_name="BAR_Arfaptin"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin;
                     cd07660"
                     /db_xref="CDD:153344"
     Site            order(179..180,186,190,193,196..197,200,203..204,208,
                     210..211,214,217..218,221..222,224..225,228,232,330,
                     334..335,338..339,341..342,349..350,352..353)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153344"
     Site            order(185,188,191..192,195..196,198..200,202..203,237,240,
                     244,247..248)
                     /site_type="other"
                     /note="Rac binding site [polypeptide binding]"
                     /db_xref="CDD:153344"
     CDS             1..381
                     /gene="ARFIP2"
                     /coded_by="XM_041470354.1:132..1277"
                     /db_xref="GeneID:121355147"
ORIGIN      
        1 msdgilskaa tmeipissng dtsslpeddg leqdlqqvmv sgpnlnetsi vsggyggtae
       61 giiptgtika ppfpgslvhp hpprgpsvpp sapaarrmar paappagpgl hppppgppag
      121 geevvrgiav ekfdivkkwg intykctkql lserfgrgsr tvdleletqi ellretkrky
      181 esvlhlaral tahlyslvqt qhalgdafad lsqkspelqe efgynaetqk llckngetll
      241 gavnffvssi ntlvnktmed tlmtvkqyet arleydayrt dleelsmgpr dagavsrlda
      301 aqsqfqshkd kyeklradva iklkfleenk ikvmhkqlll fhnaisayfa gnqqqleqtl
      361 kqfniklktp gaekpswlee q
//
LOCUS       XP_041326290             381 aa            linear   VRT 06-MAY-2021
DEFINITION  arfaptin-2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326290
VERSION     XP_041326290.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470356.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="arfaptin-2 isoform X1"
                     /calculated_mol_wt=41639
     Region          163..363
                     /region_name="BAR_Arfaptin"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin;
                     cd07660"
                     /db_xref="CDD:153344"
     Site            order(179..180,186,190,193,196..197,200,203..204,208,
                     210..211,214,217..218,221..222,224..225,228,232,330,
                     334..335,338..339,341..342,349..350,352..353)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153344"
     Site            order(185,188,191..192,195..196,198..200,202..203,237,240,
                     244,247..248)
                     /site_type="other"
                     /note="Rac binding site [polypeptide binding]"
                     /db_xref="CDD:153344"
     CDS             1..381
                     /gene="ARFIP2"
                     /coded_by="XM_041470356.1:51..1196"
                     /db_xref="GeneID:121355147"
ORIGIN      
        1 msdgilskaa tmeipissng dtsslpeddg leqdlqqvmv sgpnlnetsi vsggyggtae
       61 giiptgtika ppfpgslvhp hpprgpsvpp sapaarrmar paappagpgl hppppgppag
      121 geevvrgiav ekfdivkkwg intykctkql lserfgrgsr tvdleletqi ellretkrky
      181 esvlhlaral tahlyslvqt qhalgdafad lsqkspelqe efgynaetqk llckngetll
      241 gavnffvssi ntlvnktmed tlmtvkqyet arleydayrt dleelsmgpr dagavsrlda
      301 aqsqfqshkd kyeklradva iklkfleenk ikvmhkqlll fhnaisayfa gnqqqleqtl
      361 kqfniklktp gaekpswlee q
//
LOCUS       XP_041326291             344 aa            linear   VRT 06-MAY-2021
DEFINITION  arfaptin-2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326291
VERSION     XP_041326291.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470357.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..344
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..344
                     /product="arfaptin-2 isoform X2"
                     /calculated_mol_wt=37944
     Region          126..326
                     /region_name="BAR_Arfaptin"
                     /note="The Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin;
                     cd07660"
                     /db_xref="CDD:153344"
     Site            order(142..143,149,153,156,159..160,163,166..167,171,
                     173..174,177,180..181,184..185,187..188,191,195,293,
                     297..298,301..302,304..305,312..313,315..316)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:153344"
     Site            order(148,151,154..155,158..159,161..163,165..166,200,203,
                     207,210..211)
                     /site_type="other"
                     /note="Rac binding site [polypeptide binding]"
                     /db_xref="CDD:153344"
     CDS             1..344
                     /gene="ARFIP2"
                     /coded_by="XM_041470357.1:132..1166"
                     /db_xref="GeneID:121355147"
ORIGIN      
        1 msdgilskaa tmeipissng dtsslpeddg leqdlqqvmv sgpnlnetsi vsggyggtae
       61 giiptgtikg pglhppppgp paggeevvrg iavekfdivk kwgintykct kqllserfgr
      121 gsrtvdlele tqiellretk rkyesvlhla raltahlysl vqtqhalgda fadlsqkspe
      181 lqeefgynae tqkllcknge tllgavnffv ssintlvnkt medtlmtvkq yetarleyda
      241 yrtdleelsm gprdagavsr ldaaqsqfqs hkdkyeklra dvaiklkfle enkikvmhkq
      301 lllfhnaisa yfagnqqqle qtlkqfnikl ktpgaekpsw leeq
//
LOCUS       XP_041326292             113 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial import inner membrane translocase subunit Tim10 B
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326292
VERSION     XP_041326292.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470358.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..113
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..113
                     /product="mitochondrial import inner membrane translocase
                     subunit Tim10 B"
                     /calculated_mol_wt=12031
     Region          9..67
                     /region_name="zf-Tim10_DDP"
                     /note="Tim10/DDP family zinc finger; pfam02953"
                     /db_xref="CDD:460764"
     CDS             1..113
                     /gene="TIMM10B"
                     /coded_by="XM_041470358.1:116..457"
                     /db_xref="GeneID:121355148"
ORIGIN      
        1 mdpaaehrqq lrslrdfllv ynrmtelcfr hcvcnlnyrl ltgreescld scaarlvran
       61 hrlmgayvgl vpallqrraa ehgapagpsg lpaspepapg paepsegapa agt
//
LOCUS       XP_041326293             208 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit
            10 [Pyrgilauda ruficollis].
ACCESSION   XP_041326293
VERSION     XP_041326293.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470359.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523756.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="LOW QUALITY PROTEIN: transcription initiation
                     factor TFIID subunit 10"
                     /calculated_mol_wt=21128
     Region          105..201
                     /region_name="HFD_TAF10"
                     /note="histone-fold domain found in transcription
                     initiation factor TFIID subunit 10 (TAF10) and similar
                     proteins; cd07982"
                     /db_xref="CDD:467026"
     Site            order(105..106,109..110,112..113,116..121,124..125,
                     127..129,132..135,138,140..141,144..145,147..154,156..158,
                     160..161,164,182..187,190,194,197)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:467026"
     Site            order(127,130..135,138,140,152,162,166..167)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:467026"
     CDS             1..208
                     /gene="TAF10"
                     /coded_by="XM_041470359.1:58..684"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121355149"
ORIGIN      
        1 msgsadpdpa pavpaappgp aegskpspaa vgsagpgaap aaggaaerav prcrrgvrgs
       61 wrxpccpvvp vsaavaappd gamsngvyvp paangdvkpv vsttplvdfl mqledytpti
      121 pdavtgyyln ragfeasdpr iirlislaaq kfisdianda lqhckmkgta sgssrskskd
      181 kkytltmedl tpalaeygin vkkphyft
//
LOCUS       XP_041326294             233 aa            linear   VRT 06-MAY-2021
DEFINITION  gap junction delta-2 protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326294
VERSION     XP_041326294.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470360.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523761.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..233
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..233
                     /product="gap junction delta-2 protein-like"
                     /calculated_mol_wt=25898
     Region          <1..186
                     /region_name="Connexin"
                     /note="pfam00029"
                     /db_xref="CDD:459638"
     CDS             1..233
                     /gene="LOC121355152"
                     /coded_by="XM_041470360.1:349..1050"
                     /db_xref="GeneID:121355152"
ORIGIN      
        1 mfmcntlqpg cnqacydkaf pishirywvf qiilvctpsl cfitysvhqa akqrerrcsf
       61 lqplleprrp kangapaaep aakdepepgg kaqrgargrr hegisrfyvi qvvfrnalei
      121 gflggqyfly gfnvpaifec drypcvkeve cyvsrpteks vflvfmfavs gvcvllnlae
      181 lnhlgwrkvr aavrgararr kslsdarrke tataaaaaap algrtqsses ayv
//
LOCUS       XP_041326295             494 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal protein S6 kinase beta-2 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326295
VERSION     XP_041326295.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470361.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="ribosomal protein S6 kinase beta-2 isoform X1"
                     /calculated_mol_wt=54140
     Region          86..408
                     /region_name="STKc_p70S6K"
                     /note="Catalytic domain of the Serine/Threonine Kinase, 70
                     kDa ribosomal protein S6 kinase; cd05584"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,164..165,167,171,173,210,212,
                     214..215,217,227..228,231,245..250,277,283,286)
                     /site_type="active"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,165..167,171,210,212,214..215,
                     217,227..228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270736"
     Site            order(93,171,173,210,212,214,231,245..250,277,283,286)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270736"
     Site            227..250
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270736"
     Site            386
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270736"
     Site            400..405
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270736"
     CDS             1..494
                     /gene="RPS6KB2"
                     /coded_by="XM_041470361.1:442..1926"
                     /db_xref="GeneID:121355154"
ORIGIN      
        1 mcplpavdpl savsallamc plpamrplpa arpcapltas slpqemelep rgnglepvgh
       61 yeeieisess vnngpehigp hcfellrvlg kggygkvfqv rkvqgtntgk ifamkvlkka
      121 kiacnakdta htraernile avkhpfivdl iyafqtggkl ylileclsgg elfmqlereg
      181 ifledtacfy lseitlalgh lhshgiiyrd lkpenimlns qghikltdfg lckesihdga
      241 vthtfcgtie ymapeilvrs ghnravdwws lgalmydmlt gsppftaenr kktidkilkg
      301 klvlppyltp dardllkkfl krnpsqrvgg gpgdaadvqk qpffrhinwe dllarrldpp
      361 fkpclqseed vsqfdtrftr qtpvdspdda aisesanqaf lgftyvapsv lesikegfsf
      421 qpkvrsprrl nssprtpvsp vkfspfeafk pvapgdpmel gppqapppeg taplpikpsg
      481 gakkqkggrg rvpr
//
LOCUS       XP_041326296             494 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal protein S6 kinase beta-2 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326296
VERSION     XP_041326296.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470362.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..494
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..494
                     /product="ribosomal protein S6 kinase beta-2 isoform X2"
                     /calculated_mol_wt=54140
     Region          86..408
                     /region_name="STKc_p70S6K"
                     /note="Catalytic domain of the Serine/Threonine Kinase, 70
                     kDa ribosomal protein S6 kinase; cd05584"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,164..165,167,171,173,210,212,
                     214..215,217,227..228,231,245..250,277,283,286)
                     /site_type="active"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,165..167,171,210,212,214..215,
                     217,227..228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270736"
     Site            order(93,171,173,210,212,214,231,245..250,277,283,286)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270736"
     Site            227..250
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270736"
     Site            386
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270736"
     Site            400..405
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270736"
     CDS             1..494
                     /gene="RPS6KB2"
                     /coded_by="XM_041470362.1:443..1927"
                     /db_xref="GeneID:121355154"
ORIGIN      
        1 mcplpavdpl savsallamc plpamrplpa arpcapltas slpqemelep rgnglepvgh
       61 yeeieisess vnngpehigp hcfellrvlg kggygkvfqv rkvqgtntgk ifamkvlkka
      121 kiacnakdta htraernile avkhpfivdl iyafqtggkl ylileclsgg elfmqlereg
      181 ifledtacfy lseitlalgh lhshgiiyrd lkpenimlns qghikltdfg lckesihdga
      241 vthtfcgtie ymapeilvrs ghnravdwws lgalmydmlt gsppftaenr kktidkilkg
      301 klvlppyltp dardllkkfl krnpsqrvgg gpgdaadvqk qpffrhinwe dllarrldpp
      361 fkpclqseed vsqfdtrftr qtpvdspdda aisesanqaf lgftyvapsv lesikegfsf
      421 qpkvrsprrl nssprtpvsp vkfspfeafk pvapgdpmel gppqapppeg taplpikpsg
      481 gakkqkggrg rvpr
//
LOCUS       XP_041326297             493 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal protein S6 kinase beta-2 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326297
VERSION     XP_041326297.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470363.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="ribosomal protein S6 kinase beta-2 isoform X3"
                     /calculated_mol_wt=54012
     Region          86..407
                     /region_name="STKc_p70S6K"
                     /note="Catalytic domain of the Serine/Threonine Kinase, 70
                     kDa ribosomal protein S6 kinase; cd05584"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,164..165,167,171,173,210,212,
                     214..215,217,227..228,231,245..250,277,283,286)
                     /site_type="active"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,165..167,171,210,212,214..215,
                     217,227..228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270736"
     Site            order(93,171,173,210,212,214,231,245..250,277,283,286)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270736"
     Site            227..250
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270736"
     Site            385
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270736"
     Site            399..404
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270736"
     CDS             1..493
                     /gene="RPS6KB2"
                     /coded_by="XM_041470363.1:443..1924"
                     /db_xref="GeneID:121355154"
ORIGIN      
        1 mcplpavdpl savsallamc plpamrplpa arpcapltas slpqemelep rgnglepvgh
       61 yeeieisess vnngpehigp hcfellrvlg kggygkvfqv rkvqgtntgk ifamkvlkka
      121 kiacnakdta htraernile avkhpfivdl iyafqtggkl ylileclsgg elfmqlereg
      181 ifledtacfy lseitlalgh lhshgiiyrd lkpenimlns qghikltdfg lckesihdga
      241 vthtfcgtie ymapeilvrs ghnravdwws lgalmydmlt gsppftaenr kktidkilkg
      301 klvlppyltp dardllkkfl krnpsqrvgg gpgdaadvqk qpffrhinwe dllarrldpp
      361 fkpclseedv sqfdtrftrq tpvdspddaa isesanqafl gftyvapsvl esikegfsfq
      421 pkvrsprrln ssprtpvspv kfspfeafkp vapgdpmelg ppqapppegt aplpikpsgg
      481 akkqkggrgr vpr
//
LOCUS       XP_041326298             493 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal protein S6 kinase beta-2 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326298
VERSION     XP_041326298.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470364.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..493
                     /product="ribosomal protein S6 kinase beta-2 isoform X4"
                     /calculated_mol_wt=54012
     Region          86..407
                     /region_name="STKc_p70S6K"
                     /note="Catalytic domain of the Serine/Threonine Kinase, 70
                     kDa ribosomal protein S6 kinase; cd05584"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,164..165,167,171,173,210,212,
                     214..215,217,227..228,231,245..250,277,283,286)
                     /site_type="active"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,113,115,148,165..167,171,210,212,214..215,
                     217,227..228)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270736"
     Site            order(93,171,173,210,212,214,231,245..250,277,283,286)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270736"
     Site            227..250
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270736"
     Site            385
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270736"
     Site            399..404
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270736"
     CDS             1..493
                     /gene="RPS6KB2"
                     /coded_by="XM_041470364.1:444..1925"
                     /db_xref="GeneID:121355154"
ORIGIN      
        1 mcplpavdpl savsallamc plpamrplpa arpcapltas slpqemelep rgnglepvgh
       61 yeeieisess vnngpehigp hcfellrvlg kggygkvfqv rkvqgtntgk ifamkvlkka
      121 kiacnakdta htraernile avkhpfivdl iyafqtggkl ylileclsgg elfmqlereg
      181 ifledtacfy lseitlalgh lhshgiiyrd lkpenimlns qghikltdfg lckesihdga
      241 vthtfcgtie ymapeilvrs ghnravdwws lgalmydmlt gsppftaenr kktidkilkg
      301 klvlppyltp dardllkkfl krnpsqrvgg gpgdaadvqk qpffrhinwe dllarrldpp
      361 fkpclseedv sqfdtrftrq tpvdspddaa isesanqafl gftyvapsvl esikegfsfq
      421 pkvrsprrln ssprtpvspv kfspfeafkp vapgdpmelg ppqapppegt aplpikpsgg
      481 akkqkggrgr vpr
//
LOCUS       XP_041326299             474 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal protein S6 kinase beta-2 isoform X5 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326299
VERSION     XP_041326299.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470365.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="ribosomal protein S6 kinase beta-2 isoform X5"
                     /calculated_mol_wt=52196
     Region          66..388
                     /region_name="STKc_p70S6K"
                     /note="Catalytic domain of the Serine/Threonine Kinase, 70
                     kDa ribosomal protein S6 kinase; cd05584"
                     /db_xref="CDD:270736"
     Site            order(69..73,77,93,95,128,144..145,147,151,153,190,192,
                     194..195,197,207..208,211,225..230,257,263,266)
                     /site_type="active"
                     /db_xref="CDD:270736"
     Site            order(69..73,77,93,95,128,145..147,151,190,192,194..195,
                     197,207..208)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270736"
     Site            order(73,151,153,190,192,194,211,225..230,257,263,266)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270736"
     Site            207..230
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270736"
     Site            366
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270736"
     Site            380..385
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270736"
     CDS             1..474
                     /gene="RPS6KB2"
                     /coded_by="XM_041470365.1:2004..3428"
                     /db_xref="GeneID:121355154"
ORIGIN      
        1 magvfdidle teegsdgdep elgaemelep rgnglepvgh yeeieisess vnngpehigp
       61 hcfellrvlg kggygkvfqv rkvqgtntgk ifamkvlkka kiacnakdta htraernile
      121 avkhpfivdl iyafqtggkl ylileclsgg elfmqlereg ifledtacfy lseitlalgh
      181 lhshgiiyrd lkpenimlns qghikltdfg lckesihdga vthtfcgtie ymapeilvrs
      241 ghnravdwws lgalmydmlt gsppftaenr kktidkilkg klvlppyltp dardllkkfl
      301 krnpsqrvgg gpgdaadvqk qpffrhinwe dllarrldpp fkpclqseed vsqfdtrftr
      361 qtpvdspdda aisesanqaf lgftyvapsv lesikegfsf qpkvrsprrl nssprtpvsp
      421 vkfspfeafk pvapgdpmel gppqapppeg taplpikpsg gakkqkggrg rvpr
//
LOCUS       XP_041326301             474 aa            linear   VRT 06-MAY-2021
DEFINITION  ribosomal protein S6 kinase beta-2 isoform X6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326301
VERSION     XP_041326301.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470367.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="ribosomal protein S6 kinase beta-2 isoform X6"
                     /calculated_mol_wt=51911
     Region          86..388
                     /region_name="STKc_p70S6K"
                     /note="Catalytic domain of the Serine/Threonine Kinase, 70
                     kDa ribosomal protein S6 kinase; cd05584"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,128,144..145,147,151,153,190,192,194..195,
                     197,207..208,211,225..230,257,263,266)
                     /site_type="active"
                     /db_xref="CDD:270736"
     Site            order(89..93,97,128,145..147,151,190,192,194..195,197,
                     207..208)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270736"
     Site            order(93,151,153,190,192,194,211,225..230,257,263,266)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270736"
     Site            207..230
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270736"
     Site            366
                     /site_type="other"
                     /note="turn motif phosphorylation site [posttranslational
                     modification]"
                     /db_xref="CDD:270736"
     Site            380..385
                     /site_type="other"
                     /note="hydrophobic motif (HM)"
                     /db_xref="CDD:270736"
     CDS             1..474
                     /gene="RPS6KB2"
                     /coded_by="XM_041470367.1:443..1867"
                     /db_xref="GeneID:121355154"
ORIGIN      
        1 mcplpavdpl savsallamc plpamrplpa arpcapltas slpqemelep rgnglepvgh
       61 yeeieisess vnngpehigp hcfellrvlg kggygkvfqa kiacnakdta htraernile
      121 avkhpfivdl iyafqtggkl ylileclsgg elfmqlereg ifledtacfy lseitlalgh
      181 lhshgiiyrd lkpenimlns qghikltdfg lckesihdga vthtfcgtie ymapeilvrs
      241 ghnravdwws lgalmydmlt gsppftaenr kktidkilkg klvlppyltp dardllkkfl
      301 krnpsqrvgg gpgdaadvqk qpffrhinwe dllarrldpp fkpclqseed vsqfdtrftr
      361 qtpvdspdda aisesanqaf lgftyvapsv lesikegfsf qpkvrsprrl nssprtpvsp
      421 vkfspfeafk pvapgdpmel gppqapppeg taplpikpsg gakkqkggrg rvpr
//
LOCUS       XP_041326302             381 aa            linear   VRT 06-MAY-2021
DEFINITION  cell cycle checkpoint control protein RAD9A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326302
VERSION     XP_041326302.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470368.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="cell cycle checkpoint control protein RAD9A"
                     /calculated_mol_wt=41110
     Region          13..266
                     /region_name="Rad9"
                     /note="pfam04139"
                     /db_xref="CDD:427739"
     CDS             1..381
                     /gene="RAD9A"
                     /coded_by="XM_041470368.1:284..1429"
                     /db_xref="GeneID:121355155"
ORIGIN      
        1 mkcviaggnv kvlgravhsl srigdelyle ptesglslra vnssrsafas flfaplffhl
       61 yepgsagpdt elfrckvhmk sflgvfrslp sleksvgkcl illkprasrl vlqlhckygv
      121 tkthnlafqe cerlqavfdt qrcasrlcap arvlaeavvh fpptlaevtl gtgpggkisl
      181 rnyveddaep sktmvtelwl aedefqsvav apgscitfcl kefrgllsfa easnlpltih
      241 fdepgrpvif tlddavlevh lvlatlsdle sksqspstng vshlpapsdd faddlesyma
      301 ametsegcse gppsptfplr tpqpakskpq eeeeeeeega vpgtpphkkf rslffgsvmt
      361 pgkpgpataq evlaedsdge s
//
LOCUS       XP_041326303             330 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein phosphatase PP1-alpha catalytic subunit
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326303
VERSION     XP_041326303.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470369.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..330
                     /product="serine/threonine-protein phosphatase PP1-alpha
                     catalytic subunit"
                     /calculated_mol_wt=37409
     Region          8..298
                     /region_name="MPP_PP1_PPKL"
                     /note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
                     proteins, metallophosphatase domain; cd07414"
                     /db_xref="CDD:277359"
     Site            order(64,66,92,96,124..125,129..130,134,173,195..197,206,
                     220..222,248,272..276)
                     /site_type="active"
                     /db_xref="CDD:277359"
     Site            order(64,66,92,124,173,248)
                     /site_type="metal-binding"
                     /note="metal binding site [ion binding]"
                     /db_xref="CDD:277359"
     Site            order(96,129..130,134,195..197,206,220..222,272..276)
                     /site_type="other"
                     /note="natural toxin binding site [chemical binding]"
                     /db_xref="CDD:277359"
     Site            order(179,181,198,203,216,225,233..234,236..238,240..242,
                     257,261,288..289,291,293,295)
                     /site_type="other"
                     /note="MYPT1 binding site [polypeptide binding]"
                     /db_xref="CDD:277359"
     CDS             1..330
                     /gene="PPP1CA"
                     /coded_by="XM_041470369.1:79..1071"
                     /db_xref="GeneID:121355156"
ORIGIN      
        1 madteklnld siisrllevq gsrpgknvql teneirglcl ksreiflsqp illeleaplk
       61 icgdihgqyy dllrlfeygg fppesnylfl gdyvdrgkqs leticlllay kikypenffl
      121 lrgnhecasi nriygfydec krryniklwk tftdcfnclp iaaivdekif cchgglspdl
      181 qsmeqirrim rptdvpdqgl lcdllwsdpd kdvqgwgend rgvsftfgae vvakflhkhd
      241 ldlicrahqv vedgyeffak rqlvtlfsap nycgefdnag ammsvdetlm csfqilkpad
      301 knkgkygqfs glnpagrpvt pprnsakakk
//
LOCUS       XP_041326304             707 aa            linear   VRT 06-MAY-2021
DEFINITION  oxysterol-binding protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326304
VERSION     XP_041326304.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470370.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..707
                     /product="oxysterol-binding protein 1 isoform X1"
                     /calculated_mol_wt=79963
     Region          <1..64
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          293..696
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     CDS             1..707
                     /gene="LOC121355157"
                     /coded_by="XM_041470370.1:150..2273"
                     /db_xref="GeneID:121355157"
ORIGIN      
        1 mghtcrgtin latanitved scnfiisngg aqtyhlkass everqrwvta lelakakavk
       61 mleesddsgd esvsqtdkte lqntlrilss kvedlstcnd liakhgtalq rslselealr
      121 lppestdkik qvneratlfr itsnaminac rdfmllaqth gkkwqkslqq erdqrirlee
      181 tleqlakqhn hlerafrgat vlpastsgtg asgkdlccpa kgdlsdeddd nneffdapei
      241 fpmpdimghk rtgsnisgts sdisldeqyk hqvedtkkek rtripykpny slnlwsimkn
      301 cigkelskip mpvnfnepls mlqrltedle yhelldraar cessleqlcy vaaftvssys
      361 ttvfrtskpf npllgetfel drleengyrs lceqvshhpp aaahhadskn gwtlrqeiki
      421 tskfrgkyls implgtihcv fhssgnhytw kkvtttvhni ivgklwidqs geieivnhkt
      481 gdkcilkfvp ysyfsrdvar kvtgevmdps gkvhfalmgt wdekmdcykv qlgtgdngae
      541 arpraheaed srvllwkrnp lpkyaenmyy fselaltlna pesgtaptds rrrpdqrlme
      601 ngrwdeanve kqrleekqrl srkrreaeaa ratedgkapl sdggvpprcp pqaltplcpp
      661 gtpydpykpl wferkkdpvt qelahvykgg yweskekqdw slcpdif
//
LOCUS       XP_041326305             682 aa            linear   VRT 06-MAY-2021
DEFINITION  oxysterol-binding protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326305
VERSION     XP_041326305.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470371.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..682
                     /product="oxysterol-binding protein 1 isoform X2"
                     /calculated_mol_wt=77512
     Region          <1..64
                     /region_name="PH-like"
                     /note="Pleckstrin homology-like domain; cl17171"
                     /db_xref="CDD:473070"
     Region          293..671
                     /region_name="Oxysterol_BP"
                     /note="Oxysterol-binding protein; pfam01237"
                     /db_xref="CDD:460126"
     CDS             1..682
                     /gene="LOC121355157"
                     /coded_by="XM_041470371.1:150..2198"
                     /db_xref="GeneID:121355157"
ORIGIN      
        1 mghtcrgtin latanitved scnfiisngg aqtyhlkass everqrwvta lelakakavk
       61 mleesddsgd esvsqtdkte lqntlrilss kvedlstcnd liakhgtalq rslselealr
      121 lppestdkik qvneratlfr itsnaminac rdfmllaqth gkkwqkslqq erdqrirlee
      181 tleqlakqhn hlerafrgat vlpastsgtg asgkdlccpa kgdlsdeddd nneffdapei
      241 fpmpdimghk rtgsnisgts sdisldeqyk hqvedtkkek rtripykpny slnlwsimkn
      301 cigkelskip mpvnfnepls mlqrltedle yhelldraar cessleqlcy vaaftvssys
      361 ttvfrtskpf npllgetfel drleengyrs lceqvshhpp aaahhadskn gwtlrqeiki
      421 tskfrgkyls implgtihcv fhssgnhytw kkvtttvhni ivgklwidqs geieivnhkt
      481 gdkcilkfvp ysyfsrdvar kvtgevmdps gkvhfalmgt wdekmdcykv qlgtgdngae
      541 arpraheaed srvllwkrnp lpkyaenmyy fselaltlna pesgtaptds rrrpdqrlme
      601 ngrwdeanve kqrleekqrl srkrreaeaa ratedgtpyd pykplwferk kdpvtqelah
      661 vykggywesk ekqdwslcpd if
//
LOCUS       XP_041326306             492 aa            linear   VRT 06-MAY-2021
DEFINITION  coronin-1B [Pyrgilauda ruficollis].
ACCESSION   XP_041326306
VERSION     XP_041326306.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470372.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..492
                     /product="coronin-1B"
                     /calculated_mol_wt=54310
     Region          10..488
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cl29593"
                     /db_xref="CDD:475233"
     Region          38..80
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          86..130
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          135..172
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          180..215
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          223..263
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          270..311
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..492
                     /gene="CORO1B"
                     /coded_by="XM_041470372.1:56..1534"
                     /db_xref="GeneID:121355158"
ORIGIN      
        1 msfrkvvrqs kfrhvfgqpv ktdqcyddir vsrvtwdstf cavnpsfvai iveasgggaf
       61 lvlplhktgr idksyptvcg htgpvldidw cphndhvias gsedctvmvw qipenglsqp
      121 ltepvvvleg hskrvgivtw hptarnvlls agcdnvvliw nvgtaeelyr ldglhpdliy
      181 svswsrdgsr fctackdksv rvidprrgtv vaekeraheg arpmraifla dgkifttgfs
      241 rmserqlalw dtenleepmg lqeldssnga llpfydpdtn vvyvcgkgds siryfeitee
      301 ppyihflntf tskepqrgmg wmpkrgldvs kceiarfykl herkcepiim tvprksdlfq
      361 ddlypdtagp eaameaeewv agrtagpvlv slrqayvpsk qrdlkvsrrt llhdsrataa
      421 atgattpppt ppaapastrf sappvlgsgs atggrleevl qevaalralv aeqgqrisrl
      481 eeqlsrleng hv
//
LOCUS       XP_041326307             297 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355159 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326307
VERSION     XP_041326307.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470373.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..297
                     /product="uncharacterized protein LOC121355159 isoform X1"
                     /calculated_mol_wt=32045
     Region          87..>145
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..297
                     /gene="LOC121355159"
                     /coded_by="XM_041470373.1:716..1609"
                     /db_xref="GeneID:121355159"
ORIGIN      
        1 mprsrgdkgt pkdteppqkg kggheegeka pkapedvgap apknsgsesr hgghgqksgk
       61 kapvdphaaa tktyspflnt vfgkerelsp eeldelldaf kefdtdqdgy isykdlgacm
      121 rtlgymptem elieisqhik mrndgpeaag gdgahggreg aqdrlprvrh ergrgdqhgr
      181 darghrgaar gaaegagggr dpagrgsqrg rscglrrvrd davvpvtetp grrgpadgsp
      241 spsparpcpa krpessastr vqreqlersi wewgrrdtad prsqrlrwqs qrrpgpq
//
LOCUS       XP_041326309             237 aa            linear   VRT 06-MAY-2021
DEFINITION  calcium-binding protein 2-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326309
VERSION     XP_041326309.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470375.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..237
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..237
                     /product="calcium-binding protein 2-like isoform X2"
                     /calculated_mol_wt=26087
     Region          87..237
                     /region_name="PTZ00184"
                     /note="calmodulin; Provisional"
                     /db_xref="CDD:185504"
     CDS             1..237
                     /gene="LOC121355159"
                     /coded_by="XM_041470375.1:716..1429"
                     /db_xref="GeneID:121355159"
ORIGIN      
        1 mprsrgdkgt pkdteppqkg kggheegeka pkapedvgap apknsgsesr hgghgqksgk
       61 kapvdphaaa tktyspflnt vfgkerelsp eeldelldaf kefdtdqdgy isykdlgacm
      121 rtlgymptem elieisqhik mrmggrvdfe dfvqmmgpkl reetahmvgv relkiafref
      181 dmngdgeist aemreaiaal lgeqlkaqev deilqdvdln gdghvdfdef vmmlssr
//
LOCUS       XP_041326310             184 aa            linear   VRT 06-MAY-2021
DEFINITION  protein tyrosine phosphatase receptor type C-associated protein
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326310
VERSION     XP_041326310.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470376.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..184
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..184
                     /product="protein tyrosine phosphatase receptor type
                     C-associated protein"
                     /calculated_mol_wt=19570
     Region          <148..184
                     /region_name="PTPRCAP"
                     /note="Protein tyrosine phosphatase receptor type
                     C-associated; pfam15713"
                     /db_xref="CDD:434877"
     CDS             1..184
                     /gene="LOC121355160"
                     /coded_by="XM_041470376.1:259..813"
                     /db_xref="GeneID:121355160"
ORIGIN      
        1 maaprwhpll llplagpaaa gepavarsdr avaallalll clavglalaw hhlcrisagr
       61 yhprplgrra lqllrgqwhr lrapgdpaaa lgdgdgevav rddqeelmpw slerrpqqee
      121 eedeqeedee eedeeeaeaa peggesplse gqaaggsaea llsdlhafsg taawgdarph
      181 vtal
//
LOCUS       XP_041326311            1207 aa            linear   VRT 06-MAY-2021
DEFINITION  lysine-specific demethylase 2A [Pyrgilauda ruficollis].
ACCESSION   XP_041326311
VERSION     XP_041326311.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470377.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1207
                     /product="lysine-specific demethylase 2A"
                     /calculated_mol_wt=137216
     Region          189..260
                     /region_name="JmjC"
                     /note="A domain family that is part of the cupin
                     metalloenzyme superfamily; smart00558"
                     /db_xref="CDD:214721"
     Region          236..336
                     /region_name="cupin_RmlC-like"
                     /note="RmlC-like cupin superfamily; cl40423"
                     /db_xref="CDD:477354"
     Region          341..>376
                     /region_name="JHD"
                     /note="Jumonji helical domain; pfam17811"
                     /db_xref="CDD:465515"
     Region          496..563
                     /region_name="CTD_KDM2A"
                     /note="C-terminal domain found in Lysine-specific
                     demethylase 2A; cd21784"
                     /db_xref="CDD:412025"
     Region          <621..654
                     /region_name="zf-CXXC"
                     /note="CXXC zinc finger domain; pfam02008"
                     /db_xref="CDD:366873"
     Region          664..720
                     /region_name="PHD_KDM2A"
                     /note="PHD finger found in Lysine-specific demethylase 2A
                     (KDM2A); cd15643"
                     /db_xref="CDD:277113"
     Site            order(664,683..687,691,715)
                     /site_type="other"
                     /note="putative histone H3 binding site [polypeptide
                     binding]"
                     /db_xref="CDD:277113"
     Region          931..977
                     /region_name="F-box_FBXL11"
                     /note="F-box domain found in F-box/LRR-repeat protein 11
                     (FBXL11) and similar proteins; cd22181"
                     /db_xref="CDD:438952"
     Site            order(932,937..938,940..946,948..950,954,957..958,
                     960..963,965..966)
                     /site_type="other"
                     /note="Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438952"
     Region          975..999
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          976..1180
                     /region_name="AMN1"
                     /note="Antagonist of mitotic exit network protein 1;
                     cd09293"
                     /db_xref="CDD:187754"
     Region          1000..1023
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1024..1047
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1048..1082
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1083..1110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1111..1139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1141..1165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     Region          1166..1185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275381"
     CDS             1..1207
                     /gene="KDM2A"
                     /coded_by="XM_041470377.1:84..3707"
                     /db_xref="GeneID:121355161"
ORIGIN      
        1 maaaapvrgq rrrrdleeed ddsspgvsfs lsseesemep eeerirysqr lrgtmrrrye
       61 ddgisddeie gkrtfdleek lstnkfnstf vvfmegkdft veyiqrgglr dplifrssdg
      121 lgikmpdpdf svndvrlcvg srrivdvmdv ntqrdiemsm aqwaryyetp eeereklynv
      181 islefshtkl enlvqrpatv dlidwvdnmw prhlkesqte stnailemqy pkvqkyclms
      241 vkgcytdfhv dfggtsvwyh ihrggkifwl ipptpqnlel yenwllsgkq gdiflgdrvs
      301 ecqrielkqg ytfvipsgwi havytpmdtl vfggnflhsf nipmqlriys iedrtrvpnk
      361 frypfyyemc wyvleryvyc itsrshltkd fqkeslsmdm elsssdsvnm eeeeeeedde
      421 daagkdsrrp mtrrsiltsp ianganvdyd elgkscrssl pglkktpsid ssdssrgsqn
      481 gqawdpsggs prksrkvhlt qfeleglrcl vdkleslplh kkcvptgied edaliadvkl
      541 lleeyansdp klaltgvpiv qwpkrdklkl qarlrvrlpt ipitkphtmk paprptpvrs
      601 tvspivsgar rrrvrcrkck acmqgecgmc hycrdmkkfg gpgrmkqscv lrqclaprlp
      661 hsvtcalcge vdqnedsqdf ekklmeccic neivhpgclq mdgegllnde lpncwecpkc
      721 yqgddaekgq krkveesddd taqakvlrpl rsceepltpp pnsptpmlql ihdpasprgv
      781 vtrsspgagp sdhhsasrde rfkrrqllrl qatertmvre kennpsgkke lsevekaklh
      841 gsyltvtlqr ptkdvhgtsi vpklqaitas sanlqhsprv vvrhaparmp lrsggdedaa
      901 aeeeedeeee edenaeegga arlngrggra qegeescvqr evwmsvfryl trrelcecmr
      961 vcktwykwcc dkrlwtkidl srcksitpqa lsgiikrqpv sldlswtnis kkqltwlvnr
     1021 lpglkdlila gcswsavcal stsscpllrt ldlrwavgik dpqirdlltp ptdkpsqdnr
     1081 sklrnmidfr laglditdat lrliirhmpl lsrldlshcn hltdqsanll tavgsstrns
     1141 ltelnmagcn kltdqallyl rrisnvtlid lrgckqitrk acehfisdls inslyclsde
     1201 kliqkis
//
LOCUS       XP_041326312            1153 aa            linear   VRT 06-MAY-2021
DEFINITION  myelin regulatory factor [Pyrgilauda ruficollis].
ACCESSION   XP_041326312
VERSION     XP_041326312.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470378.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1153
                     /product="myelin regulatory factor"
                     /calculated_mol_wt=126192
     Region          401..548
                     /region_name="NDT80_PhoG"
                     /note="NDT80 / PhoG like DNA-binding family; pfam05224"
                     /db_xref="CDD:398753"
     Region          595..712
                     /region_name="Peptidase_S74_CIMCD"
                     /note="Peptidase S74 family, C-terminal intramolecular
                     chaperone domain of Escherichia coli phage K1F
                     endosialidase and related proteins; cd10144"
                     /db_xref="CDD:381748"
     Site            order(600..607,611,615..616,618,620..625,630,633,637..646,
                     660..664,668..669,671,673,692..695,697..700,702..706,
                     708..709)
                     /site_type="other"
                     /note="trimer interface [polypeptide binding]"
                     /db_xref="CDD:381748"
     Region          1017..1152
                     /region_name="MRF_C2"
                     /note="Myelin gene regulatory factor C-terminal domain 2;
                     pfam13888"
                     /db_xref="CDD:464020"
     CDS             1..1153
                     /gene="MYRF"
                     /coded_by="XM_041470378.1:175..3636"
                     /db_xref="GeneID:121355162"
ORIGIN      
        1 mevvdeteal qrffeghdin galepsnidt sileeyiske dspeicfpei paptsythpq
       61 psssagipap passissvsn pspsaplhlp pagsqlpirh gpllanpcga aygahlncnn
      121 nngmvvpkgf laghclnnvv ppiksepkas yapgtlpdsp pdsgseaysp qqvndphllr
      181 tmtpenmchm tppsrlehpp ppppppppph lqgppppppp pphplqpqhn shfpglqrdm
      241 flkaeplmpp ysvgpgmapa elhhaqqsqm lhqllqqhga dlpvhpakkr khsesppntl
      301 naqmlnglik qepgmgsvpl npdrvqtppw hqpgalspgl iqdndslngs yldpnfqsik
      361 wqphqqnkwa tlydanykel pmltyrvdad kgfnfsvgdd afvcqkknhf qvtvyigmlg
      421 dpkyvktpeg lkplecfylk lhgvklealn qsinieqsqs drskrpfnpv tvnlppeqvt
      481 kvtvgrlhfs ettannmrkk gkpnpdqryf mlvvalqaha qnqnytlaah iseriivras
      541 npgqfesdsd vlwqraqlpd tvfhhgrvgi ntdrpdealv vhgnvkvmgs lmhpsdvrvk
      601 ediqevdtte qlkrisrmrl vhynykpefa atvgidstse tgviaqevke ilpeavkdtg
      661 dlvfsngktl enflvvnker ifmenvgavk elckltdnle tridelerws hklaklkrld
      721 smkstvssga fsqtgsqfsr agsvphkkrp hkvaskspsv vpeqacisqr flqgtiialv
      781 iimafsvvsm stlyvlslrs eedlvdidgs favptaclla lfrhggpgip valcprssqn
      841 idktqivrst aasngagsrt paehvpdeth gvalgipsrg vlacfsppcf stccsvaptd
      901 isstvpsets pahatnrtdq sqpsllpvtn ikaksrgitg kstsytkwpk tpdrsqsfgs
      961 pnaspsspfs hiqgkskyis nlslsrsnsr qqrslrqpvs erprteqpgt dgpspvlqsi
     1021 rilevnlaih sqycaaadac rtgnfsyrip vsqqtavntn ltlemnssst vsislcdlvs
     1081 sdpcqdavsr nsstdstdaq dtthrwplvm lsfrefsyhf rvaqpgradc stsleqlghl
     1141 ftdyyfqfyw lce
//
LOCUS       XP_041326313            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol lipase-alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326313
VERSION     XP_041326313.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470379.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="diacylglycerol lipase-alpha isoform X1"
                     /calculated_mol_wt=114828
     Region          288..531
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(402..403,405..413)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            472..476
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..1032
                     /gene="DAGLA"
                     /coded_by="XM_041470379.1:251..3349"
                     /db_xref="GeneID:121355163"
ORIGIN      
        1 mpgivvfrrr wsvgsddlvl pavflfllht twfvilsvvl fglvynpnet cslnlvdhgr
       61 gylgillscm iaelaiiwls mrgsilytep rdsmqyvlyv rlailviefv yaivgivwlt
      121 qyytscndit aksvtlgmvv cnwvvilsvc itvlcvfdpt grtfvklrat krrqrnlrty
      181 nlrhrleegq asswtrrlkv flcctrtkds qsdayseiay lfaeffrdld ivpsdiiagl
      241 vllrqrqrak rnavldeann dilaflsgmp vtrntkyldl knaqemqryr evcyymlfal
      301 aaygwpiylm rkptcglcrl arscsrcccl cpsrpryapg vtieednccg cnaiairrhf
      361 ldenmtsvdi vytschdavy etpfyvavdh dkkkvvisir gtlspkdalt dltgdaerlp
      421 veghhgtwlg hkgmvlsaey ikkkleqemv lsqafgrdlg rgtkhygliv vghslgagta
      481 ailsfllrpq ypslkcfays ppggllseda meyskefvta vvlgkdlvpr iglsqlegfr
      541 rqlldvlqrs tkpkwriivg atkcipksel peepeensvt snrlwthpsd ltialsastp
      601 lyppgriihv vhnhpaeqcc cceqedptyf aiwgdnkafn eviispamlh ehlpyvvmeg
      661 lnkvlenynk gktallsaak vmvsptevdl tpelifqsqp lpscpsvqig tgaipvdrrn
      721 sstkskshse islegfyetk plspvqkdpv elllldtker lsvelqdrra platmeslsd
      781 nesiysfdsr rssgfrsirg spslhavmek dethcfyidp vipeenpsls srtellaads
      841 lskhsqetqp penvlnsggt tpqrrcsaeg tgsdgertss spreepplhn grladvpspq
      901 vlefaefids lfnldsksss fqdiycmmvs dsssdfaemp ksvsdqeill raqyepnlvp
      961 kpprlfagst dpssgisvsp sfplsssgel mditptgvss qeclatdkir tstpsghvts
     1021 pakqddlmis al
//
LOCUS       XP_041326314            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol lipase-alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326314
VERSION     XP_041326314.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470380.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="diacylglycerol lipase-alpha isoform X1"
                     /calculated_mol_wt=114828
     Region          288..531
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(402..403,405..413)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            472..476
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..1032
                     /gene="DAGLA"
                     /coded_by="XM_041470380.1:158..3256"
                     /db_xref="GeneID:121355163"
ORIGIN      
        1 mpgivvfrrr wsvgsddlvl pavflfllht twfvilsvvl fglvynpnet cslnlvdhgr
       61 gylgillscm iaelaiiwls mrgsilytep rdsmqyvlyv rlailviefv yaivgivwlt
      121 qyytscndit aksvtlgmvv cnwvvilsvc itvlcvfdpt grtfvklrat krrqrnlrty
      181 nlrhrleegq asswtrrlkv flcctrtkds qsdayseiay lfaeffrdld ivpsdiiagl
      241 vllrqrqrak rnavldeann dilaflsgmp vtrntkyldl knaqemqryr evcyymlfal
      301 aaygwpiylm rkptcglcrl arscsrcccl cpsrpryapg vtieednccg cnaiairrhf
      361 ldenmtsvdi vytschdavy etpfyvavdh dkkkvvisir gtlspkdalt dltgdaerlp
      421 veghhgtwlg hkgmvlsaey ikkkleqemv lsqafgrdlg rgtkhygliv vghslgagta
      481 ailsfllrpq ypslkcfays ppggllseda meyskefvta vvlgkdlvpr iglsqlegfr
      541 rqlldvlqrs tkpkwriivg atkcipksel peepeensvt snrlwthpsd ltialsastp
      601 lyppgriihv vhnhpaeqcc cceqedptyf aiwgdnkafn eviispamlh ehlpyvvmeg
      661 lnkvlenynk gktallsaak vmvsptevdl tpelifqsqp lpscpsvqig tgaipvdrrn
      721 sstkskshse islegfyetk plspvqkdpv elllldtker lsvelqdrra platmeslsd
      781 nesiysfdsr rssgfrsirg spslhavmek dethcfyidp vipeenpsls srtellaads
      841 lskhsqetqp penvlnsggt tpqrrcsaeg tgsdgertss spreepplhn grladvpspq
      901 vlefaefids lfnldsksss fqdiycmmvs dsssdfaemp ksvsdqeill raqyepnlvp
      961 kpprlfagst dpssgisvsp sfplsssgel mditptgvss qeclatdkir tstpsghvts
     1021 pakqddlmis al
//
LOCUS       XP_041326315            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol lipase-alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326315
VERSION     XP_041326315.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470381.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="diacylglycerol lipase-alpha isoform X1"
                     /calculated_mol_wt=114828
     Region          288..531
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(402..403,405..413)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            472..476
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..1032
                     /gene="DAGLA"
                     /coded_by="XM_041470381.1:256..3354"
                     /db_xref="GeneID:121355163"
ORIGIN      
        1 mpgivvfrrr wsvgsddlvl pavflfllht twfvilsvvl fglvynpnet cslnlvdhgr
       61 gylgillscm iaelaiiwls mrgsilytep rdsmqyvlyv rlailviefv yaivgivwlt
      121 qyytscndit aksvtlgmvv cnwvvilsvc itvlcvfdpt grtfvklrat krrqrnlrty
      181 nlrhrleegq asswtrrlkv flcctrtkds qsdayseiay lfaeffrdld ivpsdiiagl
      241 vllrqrqrak rnavldeann dilaflsgmp vtrntkyldl knaqemqryr evcyymlfal
      301 aaygwpiylm rkptcglcrl arscsrcccl cpsrpryapg vtieednccg cnaiairrhf
      361 ldenmtsvdi vytschdavy etpfyvavdh dkkkvvisir gtlspkdalt dltgdaerlp
      421 veghhgtwlg hkgmvlsaey ikkkleqemv lsqafgrdlg rgtkhygliv vghslgagta
      481 ailsfllrpq ypslkcfays ppggllseda meyskefvta vvlgkdlvpr iglsqlegfr
      541 rqlldvlqrs tkpkwriivg atkcipksel peepeensvt snrlwthpsd ltialsastp
      601 lyppgriihv vhnhpaeqcc cceqedptyf aiwgdnkafn eviispamlh ehlpyvvmeg
      661 lnkvlenynk gktallsaak vmvsptevdl tpelifqsqp lpscpsvqig tgaipvdrrn
      721 sstkskshse islegfyetk plspvqkdpv elllldtker lsvelqdrra platmeslsd
      781 nesiysfdsr rssgfrsirg spslhavmek dethcfyidp vipeenpsls srtellaads
      841 lskhsqetqp penvlnsggt tpqrrcsaeg tgsdgertss spreepplhn grladvpspq
      901 vlefaefids lfnldsksss fqdiycmmvs dsssdfaemp ksvsdqeill raqyepnlvp
      961 kpprlfagst dpssgisvsp sfplsssgel mditptgvss qeclatdkir tstpsghvts
     1021 pakqddlmis al
//
LOCUS       XP_041326316            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol lipase-alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326316
VERSION     XP_041326316.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470382.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="diacylglycerol lipase-alpha isoform X1"
                     /calculated_mol_wt=114828
     Region          288..531
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(402..403,405..413)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            472..476
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..1032
                     /gene="DAGLA"
                     /coded_by="XM_041470382.1:161..3259"
                     /db_xref="GeneID:121355163"
ORIGIN      
        1 mpgivvfrrr wsvgsddlvl pavflfllht twfvilsvvl fglvynpnet cslnlvdhgr
       61 gylgillscm iaelaiiwls mrgsilytep rdsmqyvlyv rlailviefv yaivgivwlt
      121 qyytscndit aksvtlgmvv cnwvvilsvc itvlcvfdpt grtfvklrat krrqrnlrty
      181 nlrhrleegq asswtrrlkv flcctrtkds qsdayseiay lfaeffrdld ivpsdiiagl
      241 vllrqrqrak rnavldeann dilaflsgmp vtrntkyldl knaqemqryr evcyymlfal
      301 aaygwpiylm rkptcglcrl arscsrcccl cpsrpryapg vtieednccg cnaiairrhf
      361 ldenmtsvdi vytschdavy etpfyvavdh dkkkvvisir gtlspkdalt dltgdaerlp
      421 veghhgtwlg hkgmvlsaey ikkkleqemv lsqafgrdlg rgtkhygliv vghslgagta
      481 ailsfllrpq ypslkcfays ppggllseda meyskefvta vvlgkdlvpr iglsqlegfr
      541 rqlldvlqrs tkpkwriivg atkcipksel peepeensvt snrlwthpsd ltialsastp
      601 lyppgriihv vhnhpaeqcc cceqedptyf aiwgdnkafn eviispamlh ehlpyvvmeg
      661 lnkvlenynk gktallsaak vmvsptevdl tpelifqsqp lpscpsvqig tgaipvdrrn
      721 sstkskshse islegfyetk plspvqkdpv elllldtker lsvelqdrra platmeslsd
      781 nesiysfdsr rssgfrsirg spslhavmek dethcfyidp vipeenpsls srtellaads
      841 lskhsqetqp penvlnsggt tpqrrcsaeg tgsdgertss spreepplhn grladvpspq
      901 vlefaefids lfnldsksss fqdiycmmvs dsssdfaemp ksvsdqeill raqyepnlvp
      961 kpprlfagst dpssgisvsp sfplsssgel mditptgvss qeclatdkir tstpsghvts
     1021 pakqddlmis al
//
LOCUS       XP_041326318            1032 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol lipase-alpha isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326318
VERSION     XP_041326318.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470384.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1032
                     /product="diacylglycerol lipase-alpha isoform X1"
                     /calculated_mol_wt=114828
     Region          288..531
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(402..403,405..413)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            472..476
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..1032
                     /gene="DAGLA"
                     /coded_by="XM_041470384.1:144..3242"
                     /db_xref="GeneID:121355163"
ORIGIN      
        1 mpgivvfrrr wsvgsddlvl pavflfllht twfvilsvvl fglvynpnet cslnlvdhgr
       61 gylgillscm iaelaiiwls mrgsilytep rdsmqyvlyv rlailviefv yaivgivwlt
      121 qyytscndit aksvtlgmvv cnwvvilsvc itvlcvfdpt grtfvklrat krrqrnlrty
      181 nlrhrleegq asswtrrlkv flcctrtkds qsdayseiay lfaeffrdld ivpsdiiagl
      241 vllrqrqrak rnavldeann dilaflsgmp vtrntkyldl knaqemqryr evcyymlfal
      301 aaygwpiylm rkptcglcrl arscsrcccl cpsrpryapg vtieednccg cnaiairrhf
      361 ldenmtsvdi vytschdavy etpfyvavdh dkkkvvisir gtlspkdalt dltgdaerlp
      421 veghhgtwlg hkgmvlsaey ikkkleqemv lsqafgrdlg rgtkhygliv vghslgagta
      481 ailsfllrpq ypslkcfays ppggllseda meyskefvta vvlgkdlvpr iglsqlegfr
      541 rqlldvlqrs tkpkwriivg atkcipksel peepeensvt snrlwthpsd ltialsastp
      601 lyppgriihv vhnhpaeqcc cceqedptyf aiwgdnkafn eviispamlh ehlpyvvmeg
      661 lnkvlenynk gktallsaak vmvsptevdl tpelifqsqp lpscpsvqig tgaipvdrrn
      721 sstkskshse islegfyetk plspvqkdpv elllldtker lsvelqdrra platmeslsd
      781 nesiysfdsr rssgfrsirg spslhavmek dethcfyidp vipeenpsls srtellaads
      841 lskhsqetqp penvlnsggt tpqrrcsaeg tgsdgertss spreepplhn grladvpspq
      901 vlefaefids lfnldsksss fqdiycmmvs dsssdfaemp ksvsdqeill raqyepnlvp
      961 kpprlfagst dpssgisvsp sfplsssgel mditptgvss qeclatdkir tstpsghvts
     1021 pakqddlmis al
//
LOCUS       XP_041326319            1031 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol lipase-alpha isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326319
VERSION     XP_041326319.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470385.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1031
                     /product="diacylglycerol lipase-alpha isoform X2"
                     /calculated_mol_wt=114672
     Region          288..530
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(401..402,404..412)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Site            471..475
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     CDS             1..1031
                     /gene="DAGLA"
                     /coded_by="XM_041470385.1:251..3346"
                     /db_xref="GeneID:121355163"
ORIGIN      
        1 mpgivvfrrr wsvgsddlvl pavflfllht twfvilsvvl fglvynpnet cslnlvdhgr
       61 gylgillscm iaelaiiwls mrgsilytep rdsmqyvlyv rlailviefv yaivgivwlt
      121 qyytscndit aksvtlgmvv cnwvvilsvc itvlcvfdpt grtfvklrat krrqrnlrty
      181 nlrhrleegq asswtrrlkv flcctrtkds qsdayseiay lfaeffrdld ivpsdiiagl
      241 vllrqrqrak rnavldeann dilaflsgmp vtrntkyldl knaqemqryr evcyymlfal
      301 aaygwpiylm rkptcglcrl arscsccclc psrpryapgv tieednccgc naiairrhfl
      361 denmtsvdiv ytschdavye tpfyvavdhd kkkvvisirg tlspkdaltd ltgdaerlpv
      421 eghhgtwlgh kgmvlsaeyi kkkleqemvl sqafgrdlgr gtkhyglivv ghslgagtaa
      481 ilsfllrpqy pslkcfaysp pggllsedam eyskefvtav vlgkdlvpri glsqlegfrr
      541 qlldvlqrst kpkwriivga tkcipkselp eepeensvts nrlwthpsdl tialsastpl
      601 yppgriihvv hnhpaeqccc ceqedptyfa iwgdnkafne viispamlhe hlpyvvmegl
      661 nkvlenynkg ktallsaakv mvsptevdlt pelifqsqpl pscpsvqigt gaipvdrrns
      721 stkskshsei slegfyetkp lspvqkdpve lllldtkerl svelqdrrap latmeslsdn
      781 esiysfdsrr ssgfrsirgs pslhavmekd ethcfyidpv ipeenpslss rtellaadsl
      841 skhsqetqpp envlnsggtt pqrrcsaegt gsdgertsss preepplhng rladvpspqv
      901 lefaefidsl fnldsksssf qdiycmmvsd sssdfaempk svsdqeillr aqyepnlvpk
      961 pprlfagstd pssgisvsps fplsssgelm ditptgvssq eclatdkirt stpsghvtsp
     1021 akqddlmisa l
//
LOCUS       XP_041326320            1009 aa            linear   VRT 06-MAY-2021
DEFINITION  diacylglycerol lipase-alpha isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326320
VERSION     XP_041326320.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470386.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1009
                     /product="diacylglycerol lipase-alpha isoform X3"
                     /calculated_mol_wt=112318
     Region          288..>513
                     /region_name="Lipase_3"
                     /note="Lipase (class 3). Lipases are esterases that can
                     hydrolyze long-chain acyl-triglycerides into di- and
                     monoglycerides, glycerol, and free fatty acids at a
                     water/lipid interface. A typical feature of lipases is
                     'interfacial activation,' the process of...; cd00519"
                     /db_xref="CDD:238287"
     Site            order(402..403,405..413)
                     /site_type="active"
                     /note="active site flap/lid [active]"
                     /db_xref="CDD:238287"
     Region          432..633
                     /region_name="Lipase"
                     /note="Lipases are esterases that can hydrolyze long-chain
                     acyl-triglycerides into di- and monoglycerides, glycerol,
                     and free fatty acids at a water/lipid interface. A typical
                     feature of lipases is 'interfacial activation', the
                     process of becoming active at...; cd00741"
                     /db_xref="CDD:238382"
     Site            472..476
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238287"
     Site            472..476
                     /site_type="active"
                     /note="nucleophilic elbow [active]"
                     /db_xref="CDD:238382"
     Site            order(474,629)
                     /site_type="other"
                     /note="catalytic triad"
                     /db_xref="CDD:238382"
     CDS             1..1009
                     /gene="DAGLA"
                     /coded_by="XM_041470386.1:251..3280"
                     /db_xref="GeneID:121355163"
ORIGIN      
        1 mpgivvfrrr wsvgsddlvl pavflfllht twfvilsvvl fglvynpnet cslnlvdhgr
       61 gylgillscm iaelaiiwls mrgsilytep rdsmqyvlyv rlailviefv yaivgivwlt
      121 qyytscndit aksvtlgmvv cnwvvilsvc itvlcvfdpt grtfvklrat krrqrnlrty
      181 nlrhrleegq asswtrrlkv flcctrtkds qsdayseiay lfaeffrdld ivpsdiiagl
      241 vllrqrqrak rnavldeann dilaflsgmp vtrntkyldl knaqemqryr evcyymlfal
      301 aaygwpiylm rkptcglcrl arscsrcccl cpsrpryapg vtieednccg cnaiairrhf
      361 ldenmtsvdi vytschdavy etpfyvavdh dkkkvvisir gtlspkdalt dltgdaerlp
      421 veghhgtwlg hkgmvlsaey ikkkleqemv lsqafgrdlg rgtkhygliv vghslgagta
      481 ailsfllrpq ypslkcfays ppggllrigl sqlegfrrql ldvlqrstkp kwriivgatk
      541 cipkselpee peensvtsnr lwthpsdlti alsastplyp pgriihvvhn hpaeqcccce
      601 qedptyfaiw gdnkafnevi ispamlhehl pyvvmeglnk vlenynkgkt allsaakvmv
      661 sptevdltpe lifqsqplps cpsvqigtga ipvdrrnsst kskshseisl egfyetkpls
      721 pvqkdpvell lldtkerlsv elqdrrapla tmeslsdnes iysfdsrrss gfrsirgsps
      781 lhavmekdet hcfyidpvip eenpslssrt ellaadslsk hsqetqppen vlnsggttpq
      841 rrcsaegtgs dgertssspr eepplhngrl advpspqvle faefidslfn ldsksssfqd
      901 iycmmvsdss sdfaempksv sdqeillraq yepnlvpkpp rlfagstdps sgisvspsfp
      961 lsssgelmdi tptgvssqec latdkirtst psghvtspak qddlmisal
//
LOCUS       XP_041326321             129 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA polymerase delta subunit 4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326321
VERSION     XP_041326321.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470387.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..129
                     /product="DNA polymerase delta subunit 4"
                     /calculated_mol_wt=15113
     Region          <71..121
                     /region_name="DNA_pol_delta_4"
                     /note="DNA polymerase delta, subunit 4; pfam04081"
                     /db_xref="CDD:367800"
     CDS             1..129
                     /gene="POLD4"
                     /coded_by="XM_041470387.1:165..554"
                     /db_xref="GeneID:121355165"
ORIGIN      
        1 msrrameqpr ritdsfprrr rrrgpgrppg rlkgrrdkdq dqekdkvqlk vrdcpcapsq
       61 ppadpalmem lrrfdlswey gpstgitrlq rweraqelgl sppgpireal lehrdnpdvt
      121 yslwheyel
//
LOCUS       XP_041326322             378 aa            linear   VRT 06-MAY-2021
DEFINITION  pepsin A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326322
VERSION     XP_041326322.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470388.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..378
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..378
                     /product="pepsin A-like"
                     /calculated_mol_wt=41546
     Region          19..45
                     /region_name="A1_Propeptide"
                     /note="A1 Propeptide; pfam07966"
                     /db_xref="CDD:462326"
     Region          60..375
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(88,90,92,128..130,176)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133145"
     Site            88..90
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133145"
     Site            88
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133145"
     Site            order(128..131,135..138)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133145"
     CDS             1..378
                     /gene="LOC121355166"
                     /coded_by="XM_041470388.1:208..1344"
                     /db_xref="GeneID:121355166"
ORIGIN      
        1 mklllllalv glaqgfqtrv plrkmkslrq rlqeqglles yleqhpynla akyfpgiave
       61 plenymddey fgtisigtpp qeftvvfdtg ssnlwvpsvf csspacrnhn rfnpaesstf
      121 lstndtlfia ygtgsmtgvl gydtvnvagi nvrnqifgla etepgdffyy tpfdgilgla
      181 fpsiassgat pvfdnmmmen lvdrrlfsvy lsrdseggsf vlfgaidpyy ttkgiswipl
      241 saetywqism egvsvsgtpv acssgcqaiv dtgttllavp irafrtlmrr lgasssgeis
      301 cesirnlpsl ifhingkefp vpprayvlrs ngyctlglqg mdvpteegel wilgdvfire
      361 yyvifdrann kvglsrlp
//
LOCUS       XP_041326323             839 aa            linear   VRT 06-MAY-2021
DEFINITION  von Willebrand factor C and EGF domain-containing protein
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326323
VERSION     XP_041326323.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470389.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..839
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..839
                     /product="von Willebrand factor C and EGF
                     domain-containing protein"
                     /calculated_mol_wt=87907
     Region          190..218
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          233..261
                     /region_name="FXa_inhibition"
                     /note="Coagulation Factor Xa inhibitory site; pfam14670"
                     /db_xref="CDD:464251"
     Region          <276..>337
                     /region_name="PLN02983"
                     /note="biotin carboxyl carrier protein of acetyl-CoA
                     carboxylase"
                     /db_xref="CDD:215533"
     Region          341..395
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          398..>445
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          456..514
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     Region          527..580
                     /region_name="VWC"
                     /note="von Willebrand factor type C domain; cl17735"
                     /db_xref="CDD:450195"
     CDS             1..839
                     /gene="VWCE"
                     /coded_by="XM_041470389.1:1..2520"
                     /db_xref="GeneID:121355167"
ORIGIN      
        1 mlvellfqaa cvslflssgq grvyparkkp asfaverrrv gphvclpgsg sgccpgwmls
       61 pgsgkctlpl csfgcgggsc iapnlcmcpd geqgitcpep pgtcgeygcd lscnhggcqe
      121 varvcpigfs maetangvrc tdidecqsaa cegtcvnteg gfacecgagr elsadrrscr
      181 dtdecqatpc qhrcensvgs yrcscrpgyh lhgnrhscvd vdecrrpgtr rscqhschni
      241 pgsfrcscrp gyrlsadrvs cegypksila pspilqslqh pptlvllppg shllprgsps
      301 phlpvaapgt qfppsspslf pepspramga pstsippshh cwhrgisrep ssrwtepgcq
      361 sctcqggrvl cdtvscsvpc shplpapagg ccptctgclh egvaraegdv fspsdgncti
      421 cvclagnvsc lspecppgtc pspsladccs cnpekcnfrg rtyahgarfs ldgddcttcv
      481 cqggevecsf tpcpmldcpq hqrqlgpgqc cstcrdppap agcflddngv efpvgqiwsp
      541 gdpcelcicq adgsvscqrt dcvetcpypi ripgqccpdc sagctymgri fsnnetfpsa
      601 ldpclscicl lgsvacsple caivcsypfh pegrccpvce dcnyqgrkve ngqsfipegq
      661 pctrctcqlg evsceerpcp rscsephtlp vgccpscpat dirlllqgsd lspssspsss
      721 ssqspssppf ssqspvpeds ppgtpqhrry rlaqlllptt lplgsspgiw gagkpplttp
      781 spsgyplapt vppdplceat appdptgspe vqesprnedp savpsdsprf qvpgvpgmp
//
LOCUS       XP_041326324             569 aa            linear   VRT 06-MAY-2021
DEFINITION  carnosine synthase 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326324
VERSION     XP_041326324.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470390.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..569
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..569
                     /product="carnosine synthase 1"
                     /calculated_mol_wt=59829
     CDS             1..569
                     /gene="CARNS1"
                     /coded_by="XM_041470390.1:159..1868"
                     /db_xref="GeneID:121355168"
ORIGIN      
        1 meggptaesh ggvteargqp wrgdtlrret fragehpgka vaprprhprp rcplrsaipf
       61 gvpvppvppv pprpappeqd tapppppgpe raepllelrq hrhrhretpp dpdtagtgvg
      121 raaagcdnsr terhrqtpap apalstsqps pervpspeeq ewagpealcp gwledeapdg
      181 evpgdsgdpd sathayerlq salcqeglpp tldcsaeprt gfgpldmtvc ilgspipflp
      241 vlleggtrcp gamvlclspt wasrvpsess pgawslllsr gvsfkvgghs aletfvpprr
      301 anyvtgtfap gdqeggwvge lardldcptg gsvplahrle dtlvtrwvla ahanlpvppt
      361 lafvlgargd lpaepvapgv rlvrlqdpqg qqslvqeevg aflggtamep ygqvvvrpag
      421 wrwrgtgars thrkeegaav aqavgarlrg lteedsvlle amvptarlpv ppprkapalg
      481 rpppwerggr vprgpsgpcs caghmsvpwg gwvgaigvpk llgswgrarg pprhppgtpi
      541 pwpgtpcpgt pggaartpea prpphessr
//
LOCUS       XP_041326325             670 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase Slingshot homolog 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326325
VERSION     XP_041326325.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470391.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..670
                     /product="protein phosphatase Slingshot homolog 3"
                     /calculated_mol_wt=73899
     Region          3..229
                     /region_name="SSH-N"
                     /note="N-terminal domain conserved in slingshot (SSH)
                     phosphatases; cd11652"
                     /db_xref="CDD:212166"
     Region          242..294
                     /region_name="DEK_C"
                     /note="DEK C terminal domain; pfam08766"
                     /db_xref="CDD:462592"
     Region          300..438
                     /region_name="PTP_DSP_cys"
                     /note="cys-based protein tyrosine phosphatase and
                     dual-specificity phosphatase superfamily; cl28904"
                     /db_xref="CDD:475123"
     Region          <497..>586
                     /region_name="PHA02682"
                     /note="ORF080 virion core protein; Provisional"
                     /db_xref="CDD:177464"
     CDS             1..670
                     /gene="SSH3"
                     /coded_by="XM_041470391.1:8..2020"
                     /db_xref="GeneID:121355169"
ORIGIN      
        1 malvtvrrag gsaggpaeed aprrgqlqrr qsfvmvkgaa rllpaeeppp aepppaeppc
       61 qapgqqeqhl hlmmqllrpq dairlavrle sarprrvryl llvrpeeaga eaetallgvd
      121 fahegatrct lgmvlplwsd tqvfldgdgg fsvtsggqtr ifkpisvqtm wavlqelhra
      181 cedaargghi pggpalawar gyaaalgseq sclnewlama dlesvrpasp ttplrpampe
      241 lseqavrall revmatadle nvtskevree lerrtghsla ehkdfidnem llvlaqmdrp
      301 srvfphlflg sewnaanlee lqqnrvthil nvareidnff palftymnvr vydeeaaell
      361 phwndtflfl srvraaggra lvhcrmglsr saatvlayam kefgwplera lrhvrhcrpg
      421 vlpnpgfmrq ldfyqgilsa rsvaagtaac gspgrpsrrr sprrtprgtr vacprcpprw
      481 rprspprrrq lvggcweppg apaspcapsc gasacwrpps psrcwgspwp grclrprrkq
      541 rvpprghdpr paragwcarp awmvapplfv ttptviatpr atpmhlarat rvnprlnlgg
      601 kgqrlftdia tregawsspg gvaseparpa happarwgwd vplpqphehk hrhrsctgnk
      661 awkwqplval
//
LOCUS       XP_041326326             209 aa            linear   VRT 06-MAY-2021
DEFINITION  rho-related GTP-binding protein RhoD [Pyrgilauda ruficollis].
ACCESSION   XP_041326326
VERSION     XP_041326326.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470392.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..209
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..209
                     /product="rho-related GTP-binding protein RhoD"
                     /calculated_mol_wt=23013
     Region          14..209
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            23..30
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(25..31,73,128..129,131,171..173)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            48
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            51..53
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206648"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206648"
     Site            order(72..73,89..90)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206648"
     Site            128..131
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            171..173
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..209
                     /gene="RHOD"
                     /coded_by="XM_041470392.1:1..630"
                     /db_xref="GeneID:121355171"
ORIGIN      
        1 mqrerggqsp gapetevkav ivgdggcgkt sllvafakgd fpkvyvptvf ekytaslqva
       61 gkpvkihlwd tagqedydrl rplsysdanv vlmcfdvtds nsfdniltkw ypevnhfckg
      121 vpvllvgckt dlrqdqealq klkdgriepv srqqgeamar qvravsymec saryqdnvgn
      181 ifvtacsaai saarrrqrka ghrrvcvil
//
LOCUS       XP_041326327             855 aa            linear   VRT 06-MAY-2021
DEFINITION  zona pellucida sperm-binding protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326327
VERSION     XP_041326327.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470393.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..855
                     /product="zona pellucida sperm-binding protein 1"
                     /calculated_mol_wt=92006
     Region          <180..>469
                     /region_name="Glutenin_hmw"
                     /note="High molecular weight glutenin subunit; pfam03157"
                     /db_xref="CDD:367362"
     Region          496..536
                     /region_name="Trefoil"
                     /note="P or trefoil or TFF domain; Trefoil factor family
                     domain peptides are mucin-associated molecules, largely
                     found in epithelia of gastrointestinal tissues. Function
                     is not known but it was originally identified from mucosal
                     tissues, where it may have a...; cd00111"
                     /db_xref="CDD:238059"
     Site            order(524,531)
                     /site_type="active"
                     /note="putative binding specificity loop [active]"
                     /db_xref="CDD:238059"
     Region          547..811
                     /region_name="Zona_pellucida"
                     /note="Zona pellucida-like domain; pfam00100"
                     /db_xref="CDD:459673"
     CDS             1..855
                     /gene="ZP1"
                     /coded_by="XM_041470393.1:1..2568"
                     /db_xref="GeneID:121355172"
ORIGIN      
        1 mgrscsflll lfllspwpra tvallqyrhd cgelgmqllv fpshgrtvrf kvldefgsrf
       61 dvancsiclh wlnsredgsv ifssgykgch vlfkenryvl rvqleellss gipvtsyevn
      121 mtcpkpggse mlpdgtrekt rdsgvlisht glhqvsessl tltgshftsq dhleqvhtvg
      181 qyqpssvlpg lqhhsspahs gllpqpggah pvtqiqgsff rpavqppqsg gqsqpgmlrp
      241 vlvsqnhpsl ahhggqtqpg hlrpgsvsqn qpgmvhpvgq nqpgirpgsv sqnhpggqnq
      301 pgirpgsvsh nqpgmmhsvg qnqpgirpgs vsqnqpgsqn qpgqlrpgfv yqnhpggqnq
      361 pgirirpgfv shnqpgltst gaqtpagflr pgaqplnqpg vsrpshhsns htgvpghtgl
      421 lhpghpspal vhpglsswpg fispglqaep qpglgrpglr pqpgllhpgi hsqpdllest
      481 alfypspgag mqltreqcqv pvgrmpcvap qgrdacvqag ccyddmdrtt pcyygntatv
      541 qclleghfvl vvprgmvalp ynldsvrlas sqagceprrv seafvmfrfp vthcgttvqa
      601 iedmliyenq listidvrgs prgsitrdsv yilrarciyn ssdllplgve vavpptaapl
      661 amlgplglql riatdesyss yhavgdfplv rvlrdpiyve vrllqktdpn lvlvlhhcwa
      721 spgshatsqp qwpilvegcp fqgdnyrtrl ipmgpvspel pfpshyqrfv istfafvepp
      781 gmtvlegevy iscsasvchl aqpepcrpsc qlgvpsrarr spgnrrtgds mgtvtsqgcl
      841 vfpevpkrgg tqqrg
//
LOCUS       XP_041326328             441 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326328
VERSION     XP_041326328.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470394.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..441
                     /product="syntaxin-3 isoform X1"
                     /calculated_mol_wt=47827
     Region          <151..258
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          226..292
                     /region_name="SNARE"
                     /note="SNARE motif; cl22856"
                     /db_xref="CDD:473982"
     Site            order(254,261,264)
                     /site_type="other"
                     /note="flanking leucine-zipper layers"
                     /db_xref="CDD:277192"
     Site            257
                     /site_type="active"
                     /note="zero layer [active]"
                     /db_xref="CDD:277192"
     CDS             1..441
                     /gene="STX3"
                     /coded_by="XM_041470394.1:324..1649"
                     /db_xref="GeneID:121355173"
ORIGIN      
        1 msrrpqvsqs ypqehsvipg fvslcsvpst lshrpvlgha tsgvpwvsch cphsqrivls
       61 vlgpgtrhaq svtdltspph pqhlilspgq chasvlapvp resgpwgyav pgvfhvpisr
      121 drssppgphh algvpmpksl spssrpcpcp qhsvlsrkfv dvmtkyneaq vdfrerskgr
      181 iqrqleitgk nttdeeleem lesgnpsift sgimdsqisk qalseiegrh kdivrlessi
      241 kelhdmfvdi amlvenqgam idriennmdq svgfverava dtkkavkyqs earrtlpsip
      301 amsppggilp gfdpgpllsl llpdlllfpp rapapppfpp vllslgsaph vpmegdrips
      361 vgarplvpqp qrgvtrtqir gpdahprghp ggmragigtg rgvwrhqrgf lspccdrrsr
      421 qgphplvalm sgredvlimd i
//
LOCUS       XP_041326330             323 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326330
VERSION     XP_041326330.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470396.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..323
                     /product="syntaxin-3 isoform X2"
                     /calculated_mol_wt=35203
     Region          <151..258
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          260..307
                     /region_name="SNARE"
                     /note="SNARE domain; pfam05739"
                     /db_xref="CDD:461727"
     CDS             1..323
                     /gene="STX3"
                     /coded_by="XM_041470396.1:303..1274"
                     /db_xref="GeneID:121355173"
ORIGIN      
        1 msrrpqvsqs ypqehsvipg fvslcsvpst lshrpvlgha tsgvpwvsch cphsqrivls
       61 vlgpgtrhaq svtdltspph pqhlilspgq chasvlapvp resgpwgyav pgvfhvpisr
      121 drssppgphh algvpmpksl spssrpcpcp qhsvlsrkfv dvmtkyneaq vdfrerskgr
      181 iqrqleitgk nttdeeleem lesgnpsift sgimdsqisk qalseiegrh kdivrlessi
      241 kelhdmfvdi amlvenqgam idriennmdq svgfverava dtkkavkyqs earrkllilv
      301 avavlllgtv aliiglsvgl nmk
//
LOCUS       XP_041326331             285 aa            linear   VRT 06-MAY-2021
DEFINITION  syntaxin-3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326331
VERSION     XP_041326331.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470397.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..285
                     /product="syntaxin-3 isoform X3"
                     /calculated_mol_wt=32513
     Region          32..224
                     /region_name="Syntaxin"
                     /note="pfam00804"
                     /db_xref="CDD:459942"
     Region          226..276
                     /region_name="SNARE"
                     /note="SNARE domain; pfam05739"
                     /db_xref="CDD:461727"
     CDS             1..285
                     /gene="STX3"
                     /coded_by="XM_041470397.1:161..1018"
                     /db_xref="GeneID:121355173"
ORIGIN      
        1 mkdrleqlka kqdaddeeel eiavdntafm deffseieet rqnidkisen veeakklysi
       61 ilsapipeqk tkddleqlta eikkmansvr nklksmerni eqdearssad lrirksqhsv
      121 lsrkfvdvmt kyneaqvdfr erskgriqrq leitgknttd eeleemlesg npsiftsgim
      181 dsqiskqals eiegrhkdiv rlessikelh dmfvdiamlv enqgamidri ennmdqsvgf
      241 veravadtkk avkyqsearr kkimimlcci ilaiilassi asifa
//
LOCUS       XP_041326332             319 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-spanning 4-domains subfamily A member 15-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326332
VERSION     XP_041326332.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470398.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..319
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..319
                     /product="membrane-spanning 4-domains subfamily A member
                     15-like isoform X1"
                     /calculated_mol_wt=33419
     Region          58..192
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     CDS             1..319
                     /gene="LOC121355174"
                     /coded_by="XM_041470398.1:292..1251"
                     /db_xref="GeneID:121355174"
ORIGIN      
        1 mgagsggvgr grprwgagll rgvpvppavl mqgmgslrlg sravmytaet lpkgknrvmg
       61 tiqimtgflh igfgivlttl tnvytsvfvi geipflggvs fiisgclsig aeksptecav
      121 kgsqtmnvis aifallgiva fivdlnlngl yrssfnyysy lvllagngis ivlliftile
      181 fciavatanf wcratrlssn eamlivpsat rvdlavppae lpqppsysev ipgiawlgae
      241 salgwllgwq ppsychhcll pgktshpnpq gasrsihpsa lrmgrrsqtp mgggcwgwgp
      301 pkscplsktp aglfaagcs
//
LOCUS       XP_041326333             235 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-spanning 4-domains subfamily A member 12-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326333
VERSION     XP_041326333.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470399.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..235
                     /product="membrane-spanning 4-domains subfamily A member
                     12-like isoform X2"
                     /calculated_mol_wt=24631
     Region          58..192
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     CDS             1..235
                     /gene="LOC121355174"
                     /coded_by="XM_041470399.1:292..999"
                     /db_xref="GeneID:121355174"
ORIGIN      
        1 mgagsggvgr grprwgagll rgvpvppavl mqgmgslrlg sravmytaet lpkgknrvmg
       61 tiqimtgflh igfgivlttl tnvytsvfvi geipflggvs fiisgclsig aeksptecav
      121 kgsqtmnvis aifallgiva fivdlnlngl yrssfnyysy lvllagngis ivlliftile
      181 fciavatanf wcratrlssn eamlivpsat rvdlavppae lpqppsysel aapev
//
LOCUS       XP_041326334             260 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L16, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041326334
VERSION     XP_041326334.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470400.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..260
                     /product="39S ribosomal protein L16, mitochondrial"
                     /calculated_mol_wt=29633
     Region          69..196
                     /region_name="Ribosomal_L16"
                     /note="Ribosomal protein L16p/L10e; pfam00252"
                     /db_xref="CDD:459733"
     CDS             1..260
                     /gene="MRPL16"
                     /coded_by="XM_041470400.1:42..824"
                     /db_xref="GeneID:121355175"
ORIGIN      
        1 maaplrhfrr vpamwrwrlp gplragggpg gvavpraglk kwtlppdysg itipekpklk
       61 fmdkvpavpk vrreprrlrd irgpsqvatd ftegqygila lgggylhwgh femirltigr
      121 sidpksmfav wrvpapykpv trkslghrmg ggkgpidhyv tavrsgrlvv evggrcefee
      181 vqpflsrvaq klpfpavavs rdslqemrre eerrrldnqn pwtfervvts nmlgmrkyls
      241 pydlrlkgry wgkfflkhrv
//
LOCUS       XP_041326335             470 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell surface glycoprotein CD5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326335
VERSION     XP_041326335.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470401.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..470
                     /product="T-cell surface glycoprotein CD5"
                     /calculated_mol_wt=51311
     Region          38..>99
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          159..252
                     /region_name="SRCR"
                     /note="Scavenger receptor cysteine-rich domain; pfam00530"
                     /db_xref="CDD:459844"
     Region          258..347
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     CDS             1..470
                     /gene="CD5"
                     /coded_by="XM_041470401.1:43..1455"
                     /db_xref="GeneID:121355177"
ORIGIN      
        1 mapaepmatr lpilclllgm waipdyggat wipgesilrl nrggcrctgi levnrehqwr
       61 picwesvsmg dldwicqqle cgpptseple liipggkgpq sqprrctnpl gcqwelenct
      121 ehvivacrep vkttpkpppt lpattpeptg pprlrlvdgn fscsgflelh kqglwgavas
      181 ipdtwthlvt licqelrcgt agsshgkpdp gihlpvrwea vdscgsrsll dcfnrsssrg
      241 ktpafitcsd sqpralrrla agptpcegdi qvfhagqwwd lcesraaqrd krgrqicrel
      301 gcgnltssme ireppstgvt celeplhlcq pklgnirscs rtrvvcqdsk plptgtpagt
      361 ivsiclalll flilslicgp payrklmkri skkkqrqwig ptglnqtvsf hrsstaprpr
      421 gqggdndyaq apkkssqlsa ypaleaacrr snppdnssds dydlhsarrv
//
LOCUS       XP_041326336             547 aa            linear   VRT 06-MAY-2021
DEFINITION  T-cell differentiation antigen CD6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326336
VERSION     XP_041326336.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470402.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..547
                     /product="T-cell differentiation antigen CD6"
                     /calculated_mol_wt=58067
     Region          43..141
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     Region          146..241
                     /region_name="SR"
                     /note="Scavenger receptor Cys-rich; smart00202"
                     /db_xref="CDD:214555"
     CDS             1..547
                     /gene="CD6"
                     /coded_by="XM_041470402.1:79..1722"
                     /db_xref="GeneID:121355178"
ORIGIN      
        1 mgglclllva lsavaparvp tetteppntp tgntsvtpgp ralrlvggrs rcegrveleq
       61 egtwgtvcdd gwdipdadvv crqlqcghav rahgnaafgr ghgpilrdev gcegherdlw
      121 ecpaalehdc shkedagvvc sehqewrlsg grdgcagrve vffrgtwstv cnstwyetea
      181 tvlcrtlgcg dmlqrpsfrh tlpgkmtylc gslqpslaqc lwifnksapc yqsgaagvic
      241 ngsqgletpt ptaaevpprn vtvlhaeegt ptlgtppvds plfvlclvla allllsvlaf
      301 saallrlrkr samsslgvpm pvlvthssqs psapsgipnd yrktptslpk gsdclvtais
      361 kdsdsdseyy efsskppval stfynslrrh predllplrp sqdrmepfpe desarpgppl
      421 rsssssssss smepywngsi pppahgsqwh paatghgcgt appvapaapa pvpsqprvpa
      481 apadpdpdgs sstssgewye nvqetepprd psshpgwsdp scpsgerged pdfsegsdyd
      541 diqgsay
//
LOCUS       XP_041326338             504 aa            linear   VRT 06-MAY-2021
DEFINITION  pre-mRNA-processing factor 19 [Pyrgilauda ruficollis].
ACCESSION   XP_041326338
VERSION     XP_041326338.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470404.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..504
                     /product="pre-mRNA-processing factor 19"
                     /calculated_mol_wt=54919
     Region          3..56
                     /region_name="RING-Ubox_PRP19"
                     /note="U-box domain, a modified RING finger, found in
                     pre-mRNA-processing factor 19 (Prp19) and similar
                     proteins; cd16656"
                     /db_xref="CDD:438318"
     Site            order(3,15,17,21..22,24,53..56)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:438318"
     Region          69..133
                     /region_name="Prp19"
                     /note="Prp19/Pso4-like; pfam08606"
                     /db_xref="CDD:400774"
     Region          224..262
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <233..504
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          268..304
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          309..344
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          354..389
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          395..431
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          438..464
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          476..502
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..504
                     /gene="PRPF19"
                     /coded_by="XM_041470404.1:196..1710"
                     /db_xref="GeneID:121355179"
ORIGIN      
        1 malicsisne vpehpcvspv snhvyerrli ekyiaengtd pvnnqplsee qlidikvahp
       61 irpkppsats ipailkalqd ewdavmlhsf tlrqqlqttr qelshalyqh daacrviarl
      121 tkevtaarea latlkpqagl ivpqavpsaq pnvagageam dlgelagmtp eiiqklqdka
      181 tvltterkkr gktvpeelvk peelskyrqv ashvglhsas ipgilaldlc psdtnkiltg
      241 gadknvivfd ksseqilatl kghtkkvtsv vfhpsqdlvf saspdatiri wsvpnascvq
      301 vvrahegsvt glslhatgdy llsssddqyw afsdiqtgrv ltkvtdessg caltcaqfhp
      361 dglifgtgtm dsqikiwdlk ertnvanfpg hsgpitsiaf sengyylata addssvklwd
      421 lrklknfktl qldnnfevks lifdqsgtyl alggtdvqiy ickqwteilh ftehsglttg
      481 vafghhakfi astgmdrslk fysl
//
LOCUS       XP_041326339             229 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 109 [Pyrgilauda ruficollis].
ACCESSION   XP_041326339
VERSION     XP_041326339.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470405.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..229
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..229
                     /product="transmembrane protein 109"
                     /calculated_mol_wt=24556
     Region          50..220
                     /region_name="BRI3BP"
                     /note="Negative regulator of p53/TP53; pfam14965"
                     /db_xref="CDD:464410"
     CDS             1..229
                     /gene="TMEM109"
                     /coded_by="XM_041470405.1:360..1049"
                     /db_xref="GeneID:121355180"
ORIGIN      
        1 mgsavghral lalllwipfl mgsagdgakd gqegfrghat ttsddlllrl grstwdtlen
       61 wvghqplrmv aeslsttlwi vssgisaalt tlcgilgdll aassinghrl vraaalapge
      121 vqrvllwava allgswvlar lrglllpllr glklffflga flhvaasqes ptvqagmllg
      181 lwvlytflss lvaspdpsar ldaavkslew kveelrrrqk fggprnred
//
LOCUS       XP_041326340             282 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 10B [Pyrgilauda ruficollis].
ACCESSION   XP_041326340
VERSION     XP_041326340.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470406.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="leucine-rich repeat-containing protein 10B"
                     /calculated_mol_wt=31011
     Region          <36..>213
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          43..65
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..88
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          89..111
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          112..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..157
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          158..180
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          181..202
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..282
                     /gene="LRRC10B"
                     /coded_by="XM_041470406.1:30..878"
                     /db_xref="GeneID:121355181"
ORIGIN      
        1 mgsggssgrg arlaaaegpd gveqrlevrg rqvpaelwaq qglrklylsd aglrevpdel
       61 aelqhlrtla ldgnelmevp eavcdlphla hlylgrnglq glppsfaqlq slrclwiegn
      121 flahfprall qlpelrslql gdnrlcrlpa alprmaglrg lwlygnrfqe fppvllrmdh
      181 irvldldrnr iasfpdlsgl aslrllsydh npvrqppcvg devqlvgdga qeymearqer
      241 lqslqrqeee eegteaapvs pedgpedgeg eiaaltgspe et
//
LOCUS       XP_041326341             282 aa            linear   VRT 06-MAY-2021
DEFINITION  glycine N-acyltransferase-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326341
VERSION     XP_041326341.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470407.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="glycine N-acyltransferase-like protein 3"
                     /calculated_mol_wt=31050
     Region          1..185
                     /region_name="Gly_acyl_tr_N"
                     /note="Aralkyl acyl-CoA:amino acid N-acyltransferase;
                     pfam06021"
                     /db_xref="CDD:461802"
     Region          187..265
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     CDS             1..282
                     /gene="LOC121355182"
                     /coded_by="XM_041470407.1:1..849"
                     /db_xref="GeneID:121355182"
ORIGIN      
        1 mkiltcsahl qhlegilmks lpialpvfga vlninrgnpg qfevlvdkwp efgavlarps
       61 gevpandgyw ntqaafyrdl gayralletp gclrwdaaft liglqdglat vsqdlarkkg
      121 veldiveyys ywhpdpstmp eprpapgvhv gslspshvdl lndtwpyggn arsrrflaei
      181 lgrfpqvclq dgsgqpvawv ltdhfgtgth sytlpehrrr ghmqvaltva aqrahargfp
      241 tfghtalgnr pmqqlqemlg nrrlpgvcry ilhnpglhrd gp
//
LOCUS       XP_041326342             277 aa            linear   VRT 06-MAY-2021
DEFINITION  glycine-N-acyltransferase-like protein 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326342
VERSION     XP_041326342.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470408.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="glycine-N-acyltransferase-like protein 3"
                     /calculated_mol_wt=30327
     Region          1..187
                     /region_name="Gly_acyl_tr_N"
                     /note="Aralkyl acyl-CoA:amino acid N-acyltransferase;
                     pfam06021"
                     /db_xref="CDD:461802"
     Region          188..266
                     /region_name="N-Acyltransferase superfamily: Various
                     enyzmes that characteristicly catalyze the transfer of an
                     acyl group to a substrate"
                     /note="NAT (N-Acyltransferase) is a large superfamily of
                     enzymes that mostly catalyze the transfer of an acyl group
                     to a substrate and are implicated in a variety of
                     functions, from bacterial antibiotic resistance to
                     circadian rhythms in mammals. Members...; cl17182"
                     /db_xref="CDD:473072"
     CDS             1..277
                     /gene="LOC121355183"
                     /coded_by="XM_041470408.1:1..834"
                     /db_xref="GeneID:121355183"
ORIGIN      
        1 mlilrcpaql qlleetlrks lpttlpvlgt vmtvargnpa shevlvdswp nfgivltrlr
       61 pedhrdprdy ytnqlsvfyr dkgalqalle gteavtrera fqmlgmqdgl deaveevasa
      121 rglkvetiry ralmspeppq prrqmpsglr lapvspshvp llnatwalgg nahsrafllg
      181 lvrtlpsacl ldrrgrpvsw slldgqgclr hgytvpawrg hgltglplae lgrqlhargf
      241 piycavlpqn taslhalqav gflpqpgtfc milgtpk
//
LOCUS       XP_041326343             350 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355184 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326343
VERSION     XP_041326343.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470409.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..350
                     /product="uncharacterized protein LOC121355184 isoform X1"
                     /calculated_mol_wt=36901
     CDS             1..350
                     /gene="LOC121355184"
                     /coded_by="XM_041470409.1:271..1323"
                     /db_xref="GeneID:121355184"
ORIGIN      
        1 mpslpqdspa aglgtgfpmv rgppselrdf yvttyqaafg krptgspqkl kegrvlgiep
       61 psdrsirpll gvhagsgyvv nnysslrsli sphverqdtd vsttsedfkv fgrpdyqrml
      121 pehvddpqcp yptgfsfsrl rfgevkapka sgeygtqshc aspakpdvpp rvtelsgctg
      181 saprsdltlp eqpvspvptv spvppplstp gdtfpipqld vgdgrmdsfp dmcstpamgq
      241 papfappelr vgpkgviavk kplaystvhn kflnklspla pvapgefvgg lqppggvdtp
      301 ltnpswifqa gghslqspgp rdlwrasrsr vpvasaptta ppscgasmtp
//
LOCUS       XP_041326344             327 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355184 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326344
VERSION     XP_041326344.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470410.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..327
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..327
                     /product="uncharacterized protein LOC121355184 isoform X2"
                     /calculated_mol_wt=35035
     CDS             1..327
                     /gene="LOC121355184"
                     /coded_by="XM_041470410.1:271..1254"
                     /db_xref="GeneID:121355184"
ORIGIN      
        1 mpslpqdspa aglgtgfpmv rgppselrdf yvttyqaafg krptgspqkl kegrvlgiep
       61 psdrsirpll gvhagsgyvv nnysslrsli sphverqdtd vsttsedfkv fgrpdyqrml
      121 pehvddpqcp yptgfsfsrl rfgevkapka sgeygtqshc aspakpdvpp rvtelsgctg
      181 saprsdltlp eqpvspvptv spvppplstp gdtfpipqld vgdgrmdsfp dmcstpamgq
      241 papfappelr vgpkgviavk kplaystvhn kflnklspla pvapgwwaqp pitwaprsve
      301 giqipspsgf stnnrptilw rvddplt
//
LOCUS       XP_041326346             325 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355184 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326346
VERSION     XP_041326346.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470412.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..325
                     /product="uncharacterized protein LOC121355184 isoform X3"
                     /calculated_mol_wt=34392
     CDS             1..325
                     /gene="LOC121355184"
                     /coded_by="XM_041470412.1:271..1248"
                     /db_xref="GeneID:121355184"
ORIGIN      
        1 mpslpqdspa aglgtgfpmv rgppselrdf yvttyqaafg krptgspqkl kegrvlgiep
       61 psdrsirpll gvhagsgyvv nnysslrsli sphverqdtd vsttsedfkv fgrpdyqrml
      121 pehvddpqcp yptgfsfsrl rfgevkapka sgeygtqshc aspakpdvpp rvtelsgctg
      181 saprsdltlp eqpldvgdgr mdsfpdmcst pamgqpapfa ppelrvgpkg viavkkplay
      241 stvhnkflnk lsplapvapg efvgglqppg gvdtpltnps wifqagghsl qspgprdlwr
      301 asrsrvpvas apttappscg asmtp
//
LOCUS       XP_041326347             282 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355184 isoform X4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326347
VERSION     XP_041326347.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470413.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..282
                     /product="uncharacterized protein LOC121355184 isoform X4"
                     /calculated_mol_wt=30113
     CDS             1..282
                     /gene="LOC121355184"
                     /coded_by="XM_041470413.1:271..1119"
                     /db_xref="GeneID:121355184"
ORIGIN      
        1 mpslpqdspa aglgtgfpmv rgppselrdf yvttyqaafg krptgspqkl kegrvlgiep
       61 psdrsirpll gvhagsgyvv nnysslrsli sphverqdtd vsttsedfkv fgrpdyqrml
      121 pehvddpqcp yptgfsfsrl rfgevkapka sgeygtqshc aspakpdvpp rvtelsgctg
      181 saprsdltlp eqphscngpa cplcppgaps gtqgshcree atglqhcpqq vpeqalaagp
      241 rstrlvgtas nhlgpeicgg hpdpesqwlq hqqpphhpva rr
//
LOCUS       XP_041326348             154 aa            linear   VRT 06-MAY-2021
DEFINITION  succinate dehydrogenase assembly factor 2, mitochondrial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326348
VERSION     XP_041326348.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470414.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..154
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..154
                     /product="succinate dehydrogenase assembly factor 2,
                     mitochondrial"
                     /calculated_mol_wt=18263
     Region          56..132
                     /region_name="Sdh5"
                     /note="Flavinator of succinate dehydrogenase; pfam03937"
                     /db_xref="CDD:461097"
     CDS             1..154
                     /gene="SDHAF2"
                     /coded_by="XM_041470414.1:54..518"
                     /db_xref="GeneID:121355185"
ORIGIN      
        1 maaarlcflr rhllwplipq rgyrgdsptd sgkdvleipl ppwqerpdep ldtkrarlly
       61 esrkrgmlen cillslfake nlarmseeql nrydrlinep sndwdiyywa teakptpaef
      121 dtdvmamlre faknrnreqr lrqpdleylf eppr
//
LOCUS       XP_041326349            1140 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA damage-binding protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326349
VERSION     XP_041326349.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470415.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1140
                     /product="DNA damage-binding protein 1"
                     /calculated_mol_wt=126722
     Region          75..543
                     /region_name="MMS1_N"
                     /note="Mono-functional DNA-alkylating methyl
                     methanesulfonate N-term; pfam10433"
                     /db_xref="CDD:463091"
     Region          789..1099
                     /region_name="CPSF_A"
                     /note="CPSF A subunit region; pfam03178"
                     /db_xref="CDD:427182"
     CDS             1..1140
                     /gene="DDB1"
                     /coded_by="XM_041470415.1:225..3647"
                     /db_xref="GeneID:121355186"
ORIGIN      
        1 msynyvvtaq kptavngcvt ghftsaedln lliakntrle iyvvtaeglr pvkevgmygk
       61 tavmelfrpk geskdllfil takynacile ykqngdsidi itrahgnvqd rigrpsetgi
      121 igiidpecrm iglrlydglf kvipldrdnk elkafnirle elqvidvkfl ygcqapticf
      181 vyqdpqgrhv ktyevslrek efnkgpwkqe nveaeasmvi avpepfggai iigqesityh
      241 ngdkylaiap piikqstivc hnrvdpngsr yllgdmegrl fmlllekeeq mdgtvtlkdl
      301 rvellgetsi aecltyldng vvfvgsrlgd sqlvklnvds neqgsyvvam etftnlgpiv
      361 dmcvvdlerq gqgqlvtcsg afkegslrii rngigiheha sidlpgikgl wplrsdphre
      421 tdntlvlsfv gqtrvlmlng eeveeteltg fvddqqtffc gnvahqqliq itsasvrlvs
      481 qepkslvsew kepngknisv ascntnqvvv avgralyyle irpqelrqis ctemehevac
      541 lditplgdsn gmsplcaigl wtdisarilk lpsfellhke mlggeiiprs ilmttfessh
      601 yllcalgdga lfyfglslet gllsdrkkvt lgtqptvlrt frslsttnvf acsdrptviy
      661 ssnhklvfsn vnlkevnymc plnsdgypds lalannstlt igtideiqkl hirtvplyes
      721 prkicyqevs qcfgvlssri evqdasggtt alrpsastqa lsssvstskl fssstaphet
      781 sfgeevevhn lliidqhtfe vlhahqflqn eyalslvsck lgkdpntyfi vgtamvypee
      841 aepkqgrivv fhysdgklqs laekevkgav ysmvefngkl lasinstvrl yewtaekelr
      901 tecnhynnim alylktkgdf ilvgdlmrsv lllaykpmeg nfeeiardfn pnwmsaveil
      961 dddnflgaen afnlfvcqkd saattdeerq hlqevglshl gefvnvfchg slvmqnlget
     1021 stptqgsvlf gtvngmiglv tslseswynl lldmqnrlnk viksvgkieh sfwrsfhter
     1081 ktepatgfid gdliesfldi srpkmqevva nlqiddgsgm kreatvddli kiveeltrih
//
LOCUS       XP_041326350             582 aa            linear   VRT 06-MAY-2021
DEFINITION  triokinase/FMN cyclase [Pyrgilauda ruficollis].
ACCESSION   XP_041326350
VERSION     XP_041326350.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470416.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="triokinase/FMN cyclase"
                     /calculated_mol_wt=59841
     Region          5..557
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..582
                     /gene="TKFC"
                     /coded_by="XM_041470416.1:166..1914"
                     /db_xref="GeneID:121355187"
ORIGIN      
        1 mevpkklvtt vsgcaddala glvacnsglr llqghrvvlr ndlqairgrv allsgggsgh
       61 epahagyvgk gmltgvvaga mfaspsvgsi laairavaqa gaagillivm nytgdrlnfg
      121 maleraraeg advrmvvvgd dcaftkpgka grrgicgtil ihkvagalae agasldeiek
      181 kakaaakvtg tlglslspcs ipgskpsfql aedemelglg ihgeagvhrm kvlpadkave
      241 tmlkhmtdps ssshlsltpg ssvvlvvnnl gglsclelgi vagaavrcle nrgiriaral
      301 vgcfmtamem agvsltlmlv deellrlidt ktmamawpni lagpattrre evpapteapr
      361 kpqdetgigl starvervlk rvcstlldmk eklneldrga gdgdcghths qaaqaiqewm
      421 rsrpppaapa qllsaladvv leqmggssgv lyglfltaag qslrgrsdss awadamdsgi
      481 eamqryggaa pgdrtmldsl faaaqalhsl rspgadplqv laaavqsaea aaeatrhmea
      541 gagrasyirs srleqpdaga vavaavlgav leglrdplgt sq
//
LOCUS       XP_041326351             582 aa            linear   VRT 06-MAY-2021
DEFINITION  triokinase/FMN cyclase [Pyrgilauda ruficollis].
ACCESSION   XP_041326351
VERSION     XP_041326351.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470417.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="triokinase/FMN cyclase"
                     /calculated_mol_wt=59841
     Region          5..557
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..582
                     /gene="TKFC"
                     /coded_by="XM_041470417.1:214..1962"
                     /db_xref="GeneID:121355187"
ORIGIN      
        1 mevpkklvtt vsgcaddala glvacnsglr llqghrvvlr ndlqairgrv allsgggsgh
       61 epahagyvgk gmltgvvaga mfaspsvgsi laairavaqa gaagillivm nytgdrlnfg
      121 maleraraeg advrmvvvgd dcaftkpgka grrgicgtil ihkvagalae agasldeiek
      181 kakaaakvtg tlglslspcs ipgskpsfql aedemelglg ihgeagvhrm kvlpadkave
      241 tmlkhmtdps ssshlsltpg ssvvlvvnnl gglsclelgi vagaavrcle nrgiriaral
      301 vgcfmtamem agvsltlmlv deellrlidt ktmamawpni lagpattrre evpapteapr
      361 kpqdetgigl starvervlk rvcstlldmk eklneldrga gdgdcghths qaaqaiqewm
      421 rsrpppaapa qllsaladvv leqmggssgv lyglfltaag qslrgrsdss awadamdsgi
      481 eamqryggaa pgdrtmldsl faaaqalhsl rspgadplqv laaavqsaea aaeatrhmea
      541 gagrasyirs srleqpdaga vavaavlgav leglrdplgt sq
//
LOCUS       XP_041326352             582 aa            linear   VRT 06-MAY-2021
DEFINITION  triokinase/FMN cyclase [Pyrgilauda ruficollis].
ACCESSION   XP_041326352
VERSION     XP_041326352.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470418.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="triokinase/FMN cyclase"
                     /calculated_mol_wt=59841
     Region          5..557
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..582
                     /gene="TKFC"
                     /coded_by="XM_041470418.1:148..1896"
                     /db_xref="GeneID:121355187"
ORIGIN      
        1 mevpkklvtt vsgcaddala glvacnsglr llqghrvvlr ndlqairgrv allsgggsgh
       61 epahagyvgk gmltgvvaga mfaspsvgsi laairavaqa gaagillivm nytgdrlnfg
      121 maleraraeg advrmvvvgd dcaftkpgka grrgicgtil ihkvagalae agasldeiek
      181 kakaaakvtg tlglslspcs ipgskpsfql aedemelglg ihgeagvhrm kvlpadkave
      241 tmlkhmtdps ssshlsltpg ssvvlvvnnl gglsclelgi vagaavrcle nrgiriaral
      301 vgcfmtamem agvsltlmlv deellrlidt ktmamawpni lagpattrre evpapteapr
      361 kpqdetgigl starvervlk rvcstlldmk eklneldrga gdgdcghths qaaqaiqewm
      421 rsrpppaapa qllsaladvv leqmggssgv lyglfltaag qslrgrsdss awadamdsgi
      481 eamqryggaa pgdrtmldsl faaaqalhsl rspgadplqv laaavqsaea aaeatrhmea
      541 gagrasyirs srleqpdaga vavaavlgav leglrdplgt sq
//
LOCUS       XP_041326353             582 aa            linear   VRT 06-MAY-2021
DEFINITION  triokinase/FMN cyclase [Pyrgilauda ruficollis].
ACCESSION   XP_041326353
VERSION     XP_041326353.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470419.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..582
                     /product="triokinase/FMN cyclase"
                     /calculated_mol_wt=59841
     Region          5..557
                     /region_name="PRK14479"
                     /note="dihydroxyacetone kinase; Provisional; cl29418"
                     /db_xref="CDD:475197"
     CDS             1..582
                     /gene="TKFC"
                     /coded_by="XM_041470419.1:210..1958"
                     /db_xref="GeneID:121355187"
ORIGIN      
        1 mevpkklvtt vsgcaddala glvacnsglr llqghrvvlr ndlqairgrv allsgggsgh
       61 epahagyvgk gmltgvvaga mfaspsvgsi laairavaqa gaagillivm nytgdrlnfg
      121 maleraraeg advrmvvvgd dcaftkpgka grrgicgtil ihkvagalae agasldeiek
      181 kakaaakvtg tlglslspcs ipgskpsfql aedemelglg ihgeagvhrm kvlpadkave
      241 tmlkhmtdps ssshlsltpg ssvvlvvnnl gglsclelgi vagaavrcle nrgiriaral
      301 vgcfmtamem agvsltlmlv deellrlidt ktmamawpni lagpattrre evpapteapr
      361 kpqdetgigl starvervlk rvcstlldmk eklneldrga gdgdcghths qaaqaiqewm
      421 rsrpppaapa qllsaladvv leqmggssgv lyglfltaag qslrgrsdss awadamdsgi
      481 eamqryggaa pgdrtmldsl faaaqalhsl rspgadplqv laaavqsaea aaeatrhmea
      541 gagrasyirs srleqpdaga vavaavlgav leglrdplgt sq
//
LOCUS       XP_041326355             461 aa            linear   VRT 06-MAY-2021
DEFINITION  cleavage and polyadenylation specificity factor subunit 7 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326355
VERSION     XP_041326355.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470421.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="cleavage and polyadenylation specificity factor
                     subunit 7 isoform X1"
                     /calculated_mol_wt=50748
     Region          82..171
                     /region_name="RRM_CFIm59"
                     /note="RNA recognition motif (RRM) found in pre-mRNA
                     cleavage factor Im 59 kDa subunit (CFIm59 or CPSF7) and
                     similar proteins; cd12644"
                     /db_xref="CDD:410049"
     Site            order(92..97,113,115..116,118..125)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410049"
     CDS             1..461
                     /gene="CPSF7"
                     /coded_by="XM_041470421.1:280..1665"
                     /db_xref="GeneID:121355188"
ORIGIN      
        1 msegvdlidi yadeeftqqd pefsnadqmd lyddvlaass qpqekrssss eappeirqep
       61 spkpnskppa ilytysglrn kraavyvgsf swwttdqqli qairsigvyd vvelkfaenr
      121 angqskgyae vvvasensvh kllellpgki lngdkvevrl atrqnlsqfe aqarkrvppr
      181 ahsrdsmdav dgratptena lpparmekpp svlpffsrpp alplmglppp pmppppplss
      241 afgvpppppg ipyqhllppp prlppplavp ppgavppalh lnpaffpppt aalgpppdty
      301 gkamapynhs srelgppipa vsegefeeim nrnraisssa iskavsgasa gdysnaietl
      361 ltaiavikqs rvasdercrv llsslkdclh gieaksysss sssssrkrhr srerspsrsr
      421 essrrhrdll hsddrhedyf persreherh rdrdrdrdrh h
//
LOCUS       XP_041326356             461 aa            linear   VRT 06-MAY-2021
DEFINITION  cleavage and polyadenylation specificity factor subunit 7 isoform
            X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326356
VERSION     XP_041326356.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470422.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..461
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..461
                     /product="cleavage and polyadenylation specificity factor
                     subunit 7 isoform X1"
                     /calculated_mol_wt=50748
     Region          82..171
                     /region_name="RRM_CFIm59"
                     /note="RNA recognition motif (RRM) found in pre-mRNA
                     cleavage factor Im 59 kDa subunit (CFIm59 or CPSF7) and
                     similar proteins; cd12644"
                     /db_xref="CDD:410049"
     Site            order(92..97,113,115..116,118..125)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410049"
     CDS             1..461
                     /gene="CPSF7"
                     /coded_by="XM_041470422.1:91..1476"
                     /db_xref="GeneID:121355188"
ORIGIN      
        1 msegvdlidi yadeeftqqd pefsnadqmd lyddvlaass qpqekrssss eappeirqep
       61 spkpnskppa ilytysglrn kraavyvgsf swwttdqqli qairsigvyd vvelkfaenr
      121 angqskgyae vvvasensvh kllellpgki lngdkvevrl atrqnlsqfe aqarkrvppr
      181 ahsrdsmdav dgratptena lpparmekpp svlpffsrpp alplmglppp pmppppplss
      241 afgvpppppg ipyqhllppp prlppplavp ppgavppalh lnpaffpppt aalgpppdty
      301 gkamapynhs srelgppipa vsegefeeim nrnraisssa iskavsgasa gdysnaietl
      361 ltaiavikqs rvasdercrv llsslkdclh gieaksysss sssssrkrhr srerspsrsr
      421 essrrhrdll hsddrhedyf persreherh rdrdrdrdrh h
//
LOCUS       XP_041326357             460 aa            linear   VRT 06-MAY-2021
DEFINITION  cleavage and polyadenylation specificity factor subunit 7 isoform
            X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326357
VERSION     XP_041326357.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470423.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..460
                     /product="cleavage and polyadenylation specificity factor
                     subunit 7 isoform X2"
                     /calculated_mol_wt=50620
     Region          81..170
                     /region_name="RRM_CFIm59"
                     /note="RNA recognition motif (RRM) found in pre-mRNA
                     cleavage factor Im 59 kDa subunit (CFIm59 or CPSF7) and
                     similar proteins; cd12644"
                     /db_xref="CDD:410049"
     Site            order(91..96,112,114..115,117..124)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:410049"
     CDS             1..460
                     /gene="CPSF7"
                     /coded_by="XM_041470423.1:91..1473"
                     /db_xref="GeneID:121355188"
ORIGIN      
        1 msegvdlidi yadeeftqdp efsnadqmdl yddvlaassq pqekrsssse appeirqeps
       61 pkpnskppai lytysglrnk raavyvgsfs wwttdqqliq airsigvydv velkfaenra
      121 ngqskgyaev vvasensvhk llellpgkil ngdkvevrla trqnlsqfea qarkrvppra
      181 hsrdsmdavd gratptenal pparmekpps vlpffsrppa lplmglpppp mppppplssa
      241 fgvpppppgi pyqhllpppp rlppplavpp pgavppalhl npaffpppta algpppdtyg
      301 kamapynhss relgppipav segefeeimn rnraisssai skavsgasag dysnaietll
      361 taiavikqsr vasdercrvl lsslkdclhg ieaksyssss ssssrkrhrs rerspsrsre
      421 ssrrhrdllh sddrhedyfp ersreherhr drdrdrdrhh
//
LOCUS       XP_041326358             263 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b ascorbate-dependent protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326358
VERSION     XP_041326358.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470424.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..263
                     /product="cytochrome b ascorbate-dependent protein 3
                     isoform X1"
                     /calculated_mol_wt=28477
     Region          31..209
                     /region_name="Cyt_b561_CYBASC3"
                     /note="Vertebrate cytochrome b(561), CYBASC3 gene product;
                     cd08762"
                     /db_xref="CDD:176492"
     Site            order(68,87..88,104,138,177)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:176492"
     Site            order(68,104,138,177)
                     /site_type="other"
                     /note="putative heme binding sites [chemical binding]"
                     /db_xref="CDD:176492"
     Site            101
                     /site_type="other"
                     /note="putative ascorbate binding site [chemical binding]"
                     /db_xref="CDD:176492"
     CDS             1..263
                     /gene="LOC121355189"
                     /coded_by="XM_041470424.1:97..888"
                     /db_xref="GeneID:121355189"
ORIGIN      
        1 maapsdeega vgprchhcst amldvpflpf caflgtlgll cvamvgtwcq hwrggfsldg
       61 ssrtfnwhpv lmvmglvvly gaaalvyrip ntwsgpklpw kvlhgslalg afvltvlgla
      121 avfcfhnsqg tpnmyslhsw mglatvllfs cqwaagfgaf llpwaptwlr alykpihvff
      181 gstilmlsva scvsginekl ffslkngtme ykllpaeavf antlgllili fgvlvvaala
      241 rpswkrpdsd sldsrqplls aer
//
LOCUS       XP_041326360             260 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b ascorbate-dependent protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326360
VERSION     XP_041326360.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470426.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..260
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..260
                     /product="cytochrome b ascorbate-dependent protein 3
                     isoform X2"
                     /calculated_mol_wt=28146
     Region          28..206
                     /region_name="Cyt_b561_CYBASC3"
                     /note="Vertebrate cytochrome b(561), CYBASC3 gene product;
                     cd08762"
                     /db_xref="CDD:176492"
     Site            order(65,84..85,101,135,174)
                     /site_type="active"
                     /note="putative catalytic site [active]"
                     /db_xref="CDD:176492"
     Site            order(65,101,135,174)
                     /site_type="other"
                     /note="putative heme binding sites [chemical binding]"
                     /db_xref="CDD:176492"
     Site            98
                     /site_type="other"
                     /note="putative ascorbate binding site [chemical binding]"
                     /db_xref="CDD:176492"
     CDS             1..260
                     /gene="LOC121355189"
                     /coded_by="XM_041470426.1:114..896"
                     /db_xref="GeneID:121355189"
ORIGIN      
        1 mapstpalgd pchhcstaml dvpflpfcaf lgtlgllcva mvgtwcqhwr ggfsldgssr
       61 tfnwhpvlmv mglvvlygaa alvyripntw sgpklpwkvl hgslalgafv ltvlglaavf
      121 cfhnsqgtpn myslhswmgl atvllfscqw aagfgafllp waptwlraly kpihvffgst
      181 ilmlsvascv sgineklffs lkngtmeykl lpaeavfant lgllilifgv lvvaalarps
      241 wkrpdsdsld srqpllsaer
//
LOCUS       XP_041326361             162 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 138 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326361
VERSION     XP_041326361.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470427.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..162
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..162
                     /product="transmembrane protein 138 isoform X1"
                     /calculated_mol_wt=19028
     Region          38..156
                     /region_name="TMEM138"
                     /note="Transmembrane protein 138; pfam14935"
                     /db_xref="CDD:434328"
     CDS             1..162
                     /gene="TMEM138"
                     /coded_by="XM_041470427.1:183..671"
                     /db_xref="GeneID:121355190"
ORIGIN      
        1 mlqpsnyslv lflqflllsy dlfvnsfsel lrtapavqlv lfiiqdiaiv fnviiiflmf
       61 fntyvfqagl vnllfhkfkg tillsaaylv lsisfhvwim nlrwrdssrf iwteglqtlf
      121 vfqrlaavly cyfykrtavh lgdplfyqds lwlrkefahf rg
//
LOCUS       XP_041326362             139 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 138 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326362
VERSION     XP_041326362.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470428.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..139
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..139
                     /product="transmembrane protein 138 isoform X2"
                     /calculated_mol_wt=16145
     Region          38..133
                     /region_name="TMEM138"
                     /note="Transmembrane protein 138; pfam14935"
                     /db_xref="CDD:434328"
     CDS             1..139
                     /gene="TMEM138"
                     /coded_by="XM_041470428.1:183..602"
                     /db_xref="GeneID:121355190"
ORIGIN      
        1 mlqpsnyslv lflqflllsy dlfvnsfsel lrtapavqlv lfiiqdiaiv fnviiiflmf
       61 fntyvfqagl vnllfhkfkg tillsaaylv lsisfhvwim rlaavlycyf ykrtavhlgd
      121 plfyqdslwl rkefahfrg
//
LOCUS       XP_041326363             142 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 216 [Pyrgilauda ruficollis].
ACCESSION   XP_041326363
VERSION     XP_041326363.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470429.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..142
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..142
                     /product="transmembrane protein 216"
                     /calculated_mol_wt=15778
     Region          16..117
                     /region_name="Transmemb_17"
                     /note="Predicted membrane protein; pfam09799"
                     /db_xref="CDD:462907"
     CDS             1..142
                     /gene="TMEM216"
                     /coded_by="XM_041470429.1:239..667"
                     /db_xref="GeneID:121355191"
ORIGIN      
        1 maprgrhhrs saplqvllfl ngwycatyfl leafvfvykv lllpypvsnl vldvvlllly
       61 lgieatriff gskgnlcqrk vplslslalt vpaavlavyy lllqtyslrl eaflsailll
      121 fyglelllgf lallsfssad py
//
LOCUS       XP_041326365             688 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-adrenergic receptor kinase 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326365
VERSION     XP_041326365.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470431.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..688
                     /product="beta-adrenergic receptor kinase 1 isoform X1"
                     /calculated_mol_wt=79442
     Region          32..186
                     /region_name="RGS_GRK2_GRK3"
                     /note="Regulator of G protein signaling domain (RGS) found
                     in G protein-coupled receptor kinase 2 (GRK2) and G
                     protein-coupled receptor kinase 3 (GRK3); cd08747"
                     /db_xref="CDD:188701"
     Site            order(70,73,167,169..170,172..173)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:188701"
     Site            order(106,109..110,114..118,137)
                     /site_type="other"
                     /note="putative G-alpha-q11 interface [polypeptide
                     binding]"
                     /db_xref="CDD:188701"
     Region          185..530
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(197..200,203,205,218,220,255,271..274,317,321..322,
                     324,334..335)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          553..670
                     /region_name="PH_GRK2_subgroup"
                     /note="G Protein-Coupled Receptor Kinase 2 subgroup
                     pleckstrin homology (PH) domain; cd01240"
                     /db_xref="CDD:269946"
     Site            order(553,556..558,585..587,600,602,604,654,657..658,
                     661..665,667..668)
                     /site_type="other"
                     /note="G-beta gamma binding site [polypeptide binding]"
                     /db_xref="CDD:269946"
     CDS             1..688
                     /gene="GRK2"
                     /coded_by="XM_041470431.1:109..2175"
                     /db_xref="GeneID:121355192"
ORIGIN      
        1 madleavlad vsylmameks raapaarask rivlpepsir svmqkyledr gevtfdkift
       61 qkigyllfrd fafnqaeeak plmefyeeik kyekldseee raarsrhifd hyimkellac
      121 shpfsksate hvqsrlskkq vppdlfqpyi eeicqnlrgg ifqkfiesdk ftrfcqwknv
      181 elnihltmnd fsvhriigrg gfgevygcrk adtgkmyamk cldkkrikmk qgetlalner
      241 imlslvstgd cpfivcmsya fhtpdklsfi ldlmnggdlh yhlsqhgvfs eaemrfyaae
      301 iilglehmhs rfvvyrdlkp anilldefgh vrisdlglac dfskkkphas vgthgymape
      361 vlqkgvayds sadwfslgcm lfkllrghsp frqhktkdkh eidrmtltma velpdsfspe
      421 lrsllegllq rdvnrrlgcm grgaqevkee pffkgldwqm vflqkypppl vpprgevnaa
      481 dafdigsfde edtkgiklle sdqelyrnfp ltiserwqqe vtetvfdavn adtdkleark
      541 kaknkqlghe eeyamgkdci mhgymaklgn pfltqwqrry fylfpnrlew rgegespqsl
      601 ltmeeidsve etqvkerkci llrirggkqf vlqcdsdpel vqwrkelrda qrqaqqllqr
      661 vprmqnkprs pvvelskvpf iqrspngl
//
LOCUS       XP_041326366             687 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-adrenergic receptor kinase 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326366
VERSION     XP_041326366.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470432.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..687
                     /product="beta-adrenergic receptor kinase 1 isoform X2"
                     /calculated_mol_wt=79314
     Region          32..186
                     /region_name="RGS_GRK2_GRK3"
                     /note="Regulator of G protein signaling domain (RGS) found
                     in G protein-coupled receptor kinase 2 (GRK2) and G
                     protein-coupled receptor kinase 3 (GRK3); cd08747"
                     /db_xref="CDD:188701"
     Site            order(70,73,167,169..170,172..173)
                     /site_type="other"
                     /note="putative dimer interface [polypeptide binding]"
                     /db_xref="CDD:188701"
     Site            order(106,109..110,114..118,137)
                     /site_type="other"
                     /note="putative G-alpha-q11 interface [polypeptide
                     binding]"
                     /db_xref="CDD:188701"
     Region          185..530
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(197..200,203,205,218,220,255,271..274,317,321..322,
                     324,334..335)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270781"
     Region          553..669
                     /region_name="PH_GRK2_subgroup"
                     /note="G Protein-Coupled Receptor Kinase 2 subgroup
                     pleckstrin homology (PH) domain; cd01240"
                     /db_xref="CDD:269946"
     Site            order(553,556..558,585..587,599,601,603,653,656..657,
                     660..664,666..667)
                     /site_type="other"
                     /note="G-beta gamma binding site [polypeptide binding]"
                     /db_xref="CDD:269946"
     CDS             1..687
                     /gene="GRK2"
                     /coded_by="XM_041470432.1:110..2173"
                     /db_xref="GeneID:121355192"
ORIGIN      
        1 madleavlad vsylmameks raapaarask rivlpepsir svmqkyledr gevtfdkift
       61 qkigyllfrd fafnqaeeak plmefyeeik kyekldseee raarsrhifd hyimkellac
      121 shpfsksate hvqsrlskkq vppdlfqpyi eeicqnlrgg ifqkfiesdk ftrfcqwknv
      181 elnihltmnd fsvhriigrg gfgevygcrk adtgkmyamk cldkkrikmk qgetlalner
      241 imlslvstgd cpfivcmsya fhtpdklsfi ldlmnggdlh yhlsqhgvfs eaemrfyaae
      301 iilglehmhs rfvvyrdlkp anilldefgh vrisdlglac dfskkkphas vgthgymape
      361 vlqkgvayds sadwfslgcm lfkllrghsp frqhktkdkh eidrmtltma velpdsfspe
      421 lrsllegllq rdvnrrlgcm grgaqevkee pffkgldwqm vflqkypppl vpprgevnaa
      481 dafdigsfde edtkgiklle sdqelyrnfp ltiserwqqe vtetvfdavn adtdkleark
      541 kaknkqlghe eeyamgkdci mhgymaklgn pfltqwqrry fylfpnrlew rgegespsll
      601 tmeeidsvee tqvkerkcil lrirggkqfv lqcdsdpelv qwrkelrdaq rqaqqllqrv
      661 prmqnkprsp vvelskvpfi qrspngl
//
LOCUS       XP_041326367             228 aa            linear   VRT 06-MAY-2021
DEFINITION  cardiotrophin-like cytokine factor 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326367
VERSION     XP_041326367.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470433.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="cardiotrophin-like cytokine factor 1"
                     /calculated_mol_wt=24981
     Region          <60..213
                     /region_name="LIF_OSM"
                     /note="LIF / OSM family; cl21565"
                     /db_xref="CDD:419736"
     CDS             1..228
                     /gene="CLCF1"
                     /coded_by="XM_041470433.1:132..818"
                     /db_xref="GeneID:121355193"
ORIGIN      
        1 mlnvtgelsg dswgiftflc aalcnlpalp alncseelga gqsiqqtydl trylehqlrt
       61 lagtylnylg ppfnepdfnp prlaraervp satvdldlwr gltdnarlaa nyraysrllc
      121 ylrvldgqvg taelrhrlah fcaslqglvl siggvmsslg yplpagpagp pappgapaap
      181 ndflkkmddf wllkelqtwl wrsakdfnrl kkkvppavvt lrleargf
//
LOCUS       XP_041326368             770 aa            linear   VRT 06-MAY-2021
DEFINITION  protein PAT1 homolog 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326368
VERSION     XP_041326368.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470434.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="protein PAT1 homolog 1 isoform X1"
                     /calculated_mol_wt=85979
     Region          22..717
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..770
                     /gene="PATL1"
                     /coded_by="XM_041470434.1:84..2396"
                     /db_xref="GeneID:121355194"
ORIGIN      
        1 msrliplggh tsledcplde dedafqalge ededidqfnd dtfgagavdd dwqeaherla
       61 eledkagssr epdgpvgndg dvlgdpedal aerltrlvid seledpaimq avhtrdppqq
      121 pgglnssiwd ssavlrrirg pllaqempsv svldyalpqr ppqardeerd pseralprrs
      181 sspiigsppv raipigtppk qaaipnfnqq ilcpkpvhir atmqqrypap ygermspnql
      241 cnvpnssllg hpfphsvspv lthlqraqll ggaqagrmsp sqfarvsglv gsplpsvnpk
      301 llqgrvgqmm spaggfraff gappapppsq lphppgpgsh lqnlrpqpqm frpdtthlhp
      361 qhrrllhqrq qqnrnqhrsl ngsggdrggh rsshqeqirk dpyanlmlqr ekdwvskiqm
      421 mqlqstdpyl ddyyyqnyfq kleklaaaee vhgdgpkker tklitpqvak lehtykpvqf
      481 egslgkltvs svnnprkmid avvtsrsedd etkekqvrdk rrqtlvtiek tysllldved
      541 yerryllsle gerpalmger kqkicdmydn lrgkapgqdr psddhfmqim cirkgkrlva
      601 rilpflapeq aadvlmatar nlpflikkda qdevlpcllr pfshvlyhlp lgtvtslvqq
      661 ltnlpqsaaa ptnlhltavl qnkfglslly lvlsrgeelq ssdtstelmq dnqwtelmlm
      721 atrellripq galakpvsip snlislfsry vdqqklnlle tklhlvqgir
//
LOCUS       XP_041326369             769 aa            linear   VRT 06-MAY-2021
DEFINITION  protein PAT1 homolog 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326369
VERSION     XP_041326369.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470435.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..769
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..769
                     /product="protein PAT1 homolog 1 isoform X2"
                     /calculated_mol_wt=85851
     Region          22..716
                     /region_name="PAT1"
                     /note="Topoisomerase II-associated protein PAT1;
                     pfam09770"
                     /db_xref="CDD:401645"
     CDS             1..769
                     /gene="PATL1"
                     /coded_by="XM_041470435.1:84..2393"
                     /db_xref="GeneID:121355194"
ORIGIN      
        1 msrliplggh tsledcplde dedafqalge ededidqfnd dtfgagavdd dwqeaherla
       61 eledkagssr epdgpvgndg dvlgdpedal aerltrlvid seledpaimq avhtrdppqp
      121 gglnssiwds savlrrirgp llaqempsvs vldyalpqrp pqardeerdp seralprrss
      181 spiigsppvr aipigtppkq aaipnfnqqi lcpkpvhira tmqqrypapy germspnqlc
      241 nvpnssllgh pfphsvspvl thlqraqllg gaqagrmsps qfarvsglvg splpsvnpkl
      301 lqgrvgqmms paggfraffg appapppsql phppgpgshl qnlrpqpqmf rpdtthlhpq
      361 hrrllhqrqq qnrnqhrsln gsggdrgghr sshqeqirkd pyanlmlqre kdwvskiqmm
      421 qlqstdpyld dyyyqnyfqk leklaaaeev hgdgpkkert klitpqvakl ehtykpvqfe
      481 gslgkltvss vnnprkmida vvtsrsedde tkekqvrdkr rqtlvtiekt ysllldvedy
      541 erryllsleg erpalmgerk qkicdmydnl rgkapgqdrp sddhfmqimc irkgkrlvar
      601 ilpflapeqa advlmatarn lpflikkdaq devlpcllrp fshvlyhlpl gtvtslvqql
      661 tnlpqsaaap tnlhltavlq nkfglsllyl vlsrgeelqs sdtstelmqd nqwtelmlma
      721 trellripqg alakpvsips nlislfsryv dqqklnllet klhlvqgir
//
LOCUS       XP_041326370             305 aa            linear   VRT 06-MAY-2021
DEFINITION  mas-related G-protein coupled receptor member H-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326370
VERSION     XP_041326370.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470436.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="mas-related G-protein coupled receptor member
                     H-like"
                     /calculated_mol_wt=34057
     Region          35..297
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          35..56
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          64..86
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          107..127
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          150..166
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          184..207
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          221..243
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          251..276
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..305
                     /gene="LOC121355195"
                     /coded_by="XM_041470436.1:1..918"
                     /db_xref="GeneID:121355195"
ORIGIN      
        1 melnqtsppp sspvmdtegd dscginvtdv aidgvtllic lcglagngav lwllgfhirr
       61 npitvyilnl avadftfllf mvpssllyll edvscstvvs lkylrsllll slfsynmgly
      121 lltaisierc gsilfplwyr crrpqrlswv vcallwalsi avmvvvtslc lshehehcrv
      181 alitmyalsf lifappmvis nvilfikvqc gskrrqpkrl yivifltvlf flifgvplsl
      241 wnflqqlspt lvssqvvfll acinssinpf iyflvgscwr rcsvvslqva frrvfeetgi
      301 ttmss
//
LOCUS       XP_041326371             386 aa            linear   VRT 06-MAY-2021
DEFINITION  flap endonuclease 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326371
VERSION     XP_041326371.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470437.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..386
                     /product="flap endonuclease 1"
                     /calculated_mol_wt=43283
     Region          1..359
                     /region_name="PTZ00217"
                     /note="flap endonuclease-1; Provisional"
                     /db_xref="CDD:240317"
     Site            order(7,34,36..37,40,42,44..48,53..54,61,65,69..70,73,86,
                     93,100,128,133,158,160,179,181,192,195,314..317,320)
                     /site_type="active"
                     /db_xref="CDD:350215"
     Site            order(28..30,80,167..169,208,210..211,297..298,300)
                     /site_type="other"
                     /note="FEN1-PCNA interface [polypeptide binding]"
                     /db_xref="CDD:350215"
     Site            order(45..48,61,65,69..70,73,195,314,316..317,320,323,327)
                     /site_type="other"
                     /note="3' dsDNA binding site [nucleotide binding]"
                     /db_xref="CDD:350215"
     Site            order(92..97,132..135)
                     /site_type="other"
                     /note="helical arch"
                     /db_xref="CDD:350215"
     CDS             1..386
                     /gene="FEN1"
                     /coded_by="XM_041470437.1:55..1215"
                     /db_xref="GeneID:121355196"
ORIGIN      
        1 mgihglakli advapgaire ndiksyfgrk vaidasmsiy qfliavrqga dvlqnedget
       61 tshlmgmfyr tirmvengik pvyvfdgkpp qlksgelakr terraeaekh lqeaqeagee
      121 eniekyskrl vkvtpqhtqe ckklltlmgi pyveapgeae ascaalvkag kvyaaatedm
      181 dcltfgspvl mrhltasetk klpiqefhln rilqdlqltw eqfvdlcill gcdycasirg
      241 igpkraveli rehksieriv qqldtkkypl penwlhreaq klflepdvid pdavelkwse
      301 pdeeqlvqfm cgekqfneer irngvkrlsk srqgstqgrl ddffkvtgsi tsakrkepep
      361 kggakkkakt nskpnstaat ktkkak
//
LOCUS       XP_041326372             120 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 258 [Pyrgilauda ruficollis].
ACCESSION   XP_041326372
VERSION     XP_041326372.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470438.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..120
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..120
                     /product="transmembrane protein 258"
                     /calculated_mol_wt=13742
     Region          48..120
                     /region_name="Ost5"
                     /note="Oligosaccharyltransferase subunit 5; pfam05251"
                     /db_xref="CDD:461602"
     CDS             1..120
                     /gene="TMEM258"
                     /coded_by="XM_041470438.1:1..363"
                     /db_xref="GeneID:121355198"
ORIGIN      
        1 mgrrlalaap rsrphfhfrr rrgadvrrre rsrrvaagtg dmeleamsry tspvnpavfp
       61 hltvvllaig mfftawffvy evtstkytrd iykellislv aslfmgfgvl flllwvgiyv
//
LOCUS       XP_041326373             425 aa            linear   VRT 06-MAY-2021
DEFINITION  cobalamin binding intrinsic factor-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326373
VERSION     XP_041326373.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470439.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="cobalamin binding intrinsic factor-like"
                     /calculated_mol_wt=46012
     Region          23..309
                     /region_name="Cobalamin_bind"
                     /note="Eukaryotic cobalamin-binding protein; pfam01122"
                     /db_xref="CDD:460073"
     Region          347..419
                     /region_name="DUF4430"
                     /note="Domain of unknown function (DUF4430); pfam14478"
                     /db_xref="CDD:433979"
     CDS             1..425
                     /gene="LOC121355199"
                     /coded_by="XM_041470439.1:238..1515"
                     /db_xref="GeneID:121355199"
ORIGIN      
        1 mlavalgigv llalagctat edcvapqdkv sqllqrmees vnleeaanps vllamnlagg
       61 dsdgpihkwl lqeikeeavr raqkdmtsgq valhvlalls scqdpqqvha leqtldlirv
      121 lqqktdeema kleaegipkt tlysvgldtl alclaeagga qgpsvalakq vlnpeshisv
      181 dtqamvalal acvynyvelq dvqdllreal wtvsnsflde qekrngmigh iysmglalqa
      241 leatrkfyvp rewdcaqafs vvhahdyqqp maiaqvlpal vgrsyldvag ldcaatknms
      301 pgrqlplppv lgthgiprap iqvhysitnt lqgkhfhfst svevpsdstl lqvmevaaee
      361 dpktfsfqte qtswgpfvts ihglagsted rtywqflsag naldegvgty kphdgehiqa
      421 vfsty
//
LOCUS       XP_041326374             356 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 37C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326374
VERSION     XP_041326374.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470440.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="vacuolar protein sorting-associated protein 37C"
                     /calculated_mol_wt=38783
     Region          8..149
                     /region_name="Mod_r"
                     /note="Modifier of rudimentary (Mod(r)) protein;
                     pfam07200"
                     /db_xref="CDD:462117"
     CDS             1..356
                     /gene="VPS37C"
                     /coded_by="XM_041470440.1:199..1269"
                     /db_xref="GeneID:121355200"
ORIGIN      
        1 mdtlrnrtve elrelqedsq eierlalesq evqelqlere malaanrsla eqnlkfqapl
       61 etgrsdlskk yqelqelagr creqkeklek fsaalqpqtl ldllqvesqk ieeesekmae
      121 kflegevple tfleqfsgmr klshlrrvrv eklqeivrks egsqertrds qpplpppppp
      181 hvptdppkpf psgspafplp yspaptlppg ptahgalppa pfpgspvavg hvassqpssq
      241 safpyplapa pgypaasaad sapgypksts ggfswspsrg ppqplpypap hpsppparpg
      301 yspyippgag rpqcpyptqp plpnfpiptq apypgppppf gyppppnpqr ptwpgy
//
LOCUS       XP_041326376            1154 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: transmembrane protein 132A [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326376
VERSION     XP_041326376.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470442.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1154
                     /product="LOW QUALITY PROTEIN: transmembrane protein 132A"
                     /calculated_mol_wt=126503
     Region          33..134
                     /region_name="TMEM132D_N"
                     /note="Mature oligodendrocyte transmembrane protein,
                     TMEM132D, N-term; pfam15705"
                     /db_xref="CDD:464813"
     Region          529..874
                     /region_name="TMEM132"
                     /note="Transmembrane protein family 132; pfam16070"
                     /db_xref="CDD:465003"
     Region          <961..1026
                     /region_name="TMEM132D_C"
                     /note="Mature oligodendrocyte transmembrane protein,
                     TMEM132D, C-term; pfam15706"
                     /db_xref="CDD:464814"
     CDS             1..1154
                     /gene="TMEM132A"
                     /coded_by="XM_041470442.1:81..3545"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121355201"
ORIGIN      
        1 masaprlall aaallcapvr gdgeppdpvf lpaelevlgv pesyrlqrvd qdvapnsslh
       61 trsetflllr agsqpllqat yppfsirqev stesppgsaa wairavsles svspaepvar
      121 vlfhlygpdw mpgkrdhaga rnhpkdwdhp gvwdhpevqd hpggqghprd wdhpteqnha
      181 gvqdhprnrd hpgdrdqprd qdhpeqqehh gvrdhpktrn hpkdrhhpgi hdypknrdhl
      241 kdrdhheqqd qpgswdssrn wdhsrardlp cvtlhthhrg rvarktcrlq aplgvcvvel
      301 eipprwfslg slhshwshrr dsdplepleh pelaelrysv gecggqeqea prflgmlelr
      361 ageperrqev rldekvllrv pnvplrpgqr ftatialrhn ftadsltlrv kakkglqvvs
      421 ahptipstws vhlersrgpk hstavvtcrr lgdipaipds srvsepaefl hldvavengt
      481 gglaparplt wqveypgqdp eaqkdklvwe iqvserdvra lvplvqelei lntapltgip
      541 raipvklvtv eagggvselt dpvgcesadk qvlqvsdscd lvfvggkesr gargarvdfw
      601 mrrlraelsf svwapllplr vqlgdpileq lrgwrlpggp dsavveseda aeeperrarg
      661 craqfqrtgl rvlahfvahp ldggrhlsyl pgpewlldvt hlvaartrvq dprvasleag
      721 avvvgrepgv tsvevrspls dsilgeqtlv vseekvtvte lhaqvvagls lslrtqpdhp
      781 gvvtatalgt ptlralkqea tlsiwlsfsd htlaplelyg whdvaltvts ldravatvrg
      841 spgvpaahpw vvaegpgrga llqlslhppd pcrrgrhraa alatgtawle vgipspgspr
      901 pfpraegams geavtvgqrd pagvgpaatk lqgssseede eegygrnhag meeeeeeeee
      961 mvkapervtd leigmyvllg vfclaififl vnciffvlry qqkelpepgg apsapqphnw
     1021 vwlgtdqeel srqldrqqld rpqpdrrqpe ppaspgppcg cggppgssed gappgspapg
     1081 appprkegsa pgggrrkrve fvtxrvpeep ppatphvqsi lvaseddirw vcedmglrdp
     1141 eelrsymeri rgss
//
LOCUS       XP_041326377             551 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-coenzyme A amino acid N-acyltransferase 2-like isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326377
VERSION     XP_041326377.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470443.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..551
                     /product="acyl-coenzyme A amino acid N-acyltransferase
                     2-like isoform X1"
                     /calculated_mol_wt=58801
     Region          148..277
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          339..545
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..551
                     /gene="LOC121355202"
                     /coded_by="XM_041470443.1:417..2072"
                     /db_xref="GeneID:121355202"
ORIGIN      
        1 mgqegsalai pglmiskess svslcrahgp glpggvrege earalggrfp ggtavgeprv
       61 sspgwtgani pvpslpccpe rergarrtgg lepldptllq lrggegdkrg gqrvlgmagl
      121 gdtwkrgvpa agctmvevtv tpqssladrp vqirvrglsp sqlvtlrawl kdeqgecfqs
      181 raffradgag evdpglhaal ggsysgvwpm glfwflqpdt lfrrlvkrdv agspfrvrle
      241 vfdglslgtd lreqplgsce aerwyvgpgv qrvpiregrv rgalflppgp gpfpgvidlf
      301 ggaggliefr agllasrgfa vlalaffayd dlprvlaqld leyfeeaael llrhpkvrgp
      361 glgvvgvskg aevalamatf lpqvvatvwi ngtsflygnp lvykelripa ipyytervlf
      421 tevgamdnsa iftdprdpar qasaipveki rgkvlfvvge adrsfnsklf aelalarmpp
      481 esgrilsypg aghlieppgs plcsnssirg tpkpvawgge lqpharaqeh swqeilqfle
      541 lhlgsvaamk l
//
LOCUS       XP_041326378             417 aa            linear   VRT 06-MAY-2021
DEFINITION  acyl-coenzyme A amino acid N-acyltransferase 2-like isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326378
VERSION     XP_041326378.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470444.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="acyl-coenzyme A amino acid N-acyltransferase
                     2-like isoform X2"
                     /calculated_mol_wt=45251
     Region          14..143
                     /region_name="Bile_Hydr_Trans"
                     /note="Acyl-CoA thioester hydrolase/BAAT N-terminal
                     region; pfam04775"
                     /db_xref="CDD:461422"
     Region          205..411
                     /region_name="BAAT_C"
                     /note="BAAT / Acyl-CoA thioester hydrolase C terminal;
                     pfam08840"
                     /db_xref="CDD:430252"
     CDS             1..417
                     /gene="LOC121355202"
                     /coded_by="XM_041470444.1:133..1386"
                     /db_xref="GeneID:121355202"
ORIGIN      
        1 mvevtvtpqs sladrpvqir vrglspsqlv tlrawlkdeq gecfqsraff radgagevdp
       61 glhaalggsy sgvwpmglfw flqpdtlfrr lvkrdvagsp frvrlevfdg lslgtdlreq
      121 plgsceaerw yvgpgvqrvp iregrvrgal flppgpgpfp gvidlfggag gliefragll
      181 asrgfavlal affayddlpr vlaqldleyf eeaaelllrh pkvrgpglgv vgvskgaeva
      241 lamatflpqv vatvwingts flygnplvyk elripaipyy tervlftevg amdnsaiftd
      301 prdparqasa ipvekirgkv lfvvgeadrs fnsklfaela larmppesgr ilsypgaghl
      361 ieppgsplcs nssirgtpkp vawggelqph araqehswqe ilqflelhlg svaamkl
//
LOCUS       XP_041326379             168 aa            linear   VRT 06-MAY-2021
DEFINITION  coiled-coil domain-containing protein 86 [Pyrgilauda ruficollis].
ACCESSION   XP_041326379
VERSION     XP_041326379.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470445.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..168
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..168
                     /product="coiled-coil domain-containing protein 86"
                     /calculated_mol_wt=19273
     Region          46..155
                     /region_name="Cgr1"
                     /note="Cgr1 family; pfam03879"
                     /db_xref="CDD:427562"
     CDS             1..168
                     /gene="CCDC86"
                     /coded_by="XM_041470445.1:22..528"
                     /db_xref="GeneID:121355203"
ORIGIN      
        1 megenggtpg pgaipegpsg aasapaaarr rrkggkkpqe avvaiprgkp ksgrvwkdpg
       61 kkrfshmiqd kalrsswark mkerqerklv rdlarqleea kqrekeekkr rreenlkrrl
      121 enerkaeivq virnplklrr akkkqlrrve krdtlallqk tpvrrste
//
LOCUS       XP_041326380             620 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat domain-containing protein 13D [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326380
VERSION     XP_041326380.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470446.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..620
                     /product="ankyrin repeat domain-containing protein 13D"
                     /calculated_mol_wt=69101
     Region          <9..>95
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          9..37
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(11..12,15..17,19..20,24,27,37,39,41,45..46,49..51,
                     53..54,58,61,70,72,74,78..79,82..84,86..87,91,94)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          39..70
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          155..479
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; pfam11904"
                     /db_xref="CDD:463391"
     CDS             1..620
                     /gene="ANKRD13D"
                     /coded_by="XM_041470446.1:72..1934"
                     /db_xref="GeneID:121355204"
ORIGIN      
        1 marpaetfpl hrlvwhnrhq aldsalragt hdveltdprg rtplelavsl ghlesvrvll
       61 rhnanvgren angwtvlqea vstgdpemvq lvlqyrdyqr atrrlagipe llsklrrasd
      121 fyvemkweft swvplvskvc psdvyrvwkr geslrvdttl lgfehmtwqr grrsyifkge
      181 degavvmevd hdkqvvytet lalalhepel llaamqptee hvagrltspi vsthldtrni
      241 afernksgiw gwrsekmevv sgyeakvysa snvelvtktr tehlsdqdks rskgsktpfh
      301 sflgiaqqhg thngapvlqa asptnptait peeyfdphfd letrnigrpi emsskvqrfk
      361 atlwlceqhp lslaeqvtpi idlmaisnah faklrdfitl klppgfpvki eiplfhvlna
      421 ritfsnlcgc dqplgsvric apqeppgahp agtqpsgpra wpfpceveag vfevpagytv
      481 lgagrseplr dedddllqfa iqqslldagt etdqvtiwea ltntrpgaep ppydedlqle
      541 ralqesmllq agpsaeppap gsppgagggs ppgppgygsf aeqlrlamal sereqeerer
      601 rrreedeelq rilrlsltek
//
LOCUS       XP_041326381             310 aa            linear   VRT 06-MAY-2021
DEFINITION  mas-related G-protein coupled receptor member H-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326381
VERSION     XP_041326381.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470447.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..310
                     /product="mas-related G-protein coupled receptor member
                     H-like"
                     /calculated_mol_wt=34363
     Region          31..290
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          31..51
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          57..79
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          100..120
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          143..159
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          177..200
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          214..236
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          244..269
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..310
                     /gene="LOC121355205"
                     /coded_by="XM_041470447.1:407..1339"
                     /db_xref="GeneID:121355205"
ORIGIN      
        1 mevttvsppp lsptegddlc didvtdvavd svtlliclcg lagngavlcl lqrnpttcyi
       61 inlafanfsf lhfavpstll ylledvscst vvplvflral fplllfsynl glylltaiti
      121 erctsilcpl wyrcrrpqrl swvvcallwa lsiavivtmt alchsqdheh cqvslitmya
      181 lnlflfapam aisssilfik vkcisqqqqp krlniviflv vlffllfalp lslsnflqql
      241 gyiavpsqvv flltcihsti npfiyflvgr crrpcsvgsl rlslqrifee peentahsdd
      301 pamdtafpac
//
LOCUS       XP_041326382             208 aa            linear   VRT 06-MAY-2021
DEFINITION  membrane-spanning 4-domains subfamily A member 15-like [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326382
VERSION     XP_041326382.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470448.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="membrane-spanning 4-domains subfamily A member
                     15-like"
                     /calculated_mol_wt=21983
     Region          53..194
                     /region_name="CD20"
                     /note="CD20-like family; pfam04103"
                     /db_xref="CDD:461174"
     CDS             1..208
                     /gene="LOC121355208"
                     /coded_by="XM_041470448.1:32..658"
                     /db_xref="GeneID:121355208"
ORIGIN      
        1 maattvtdag svriitevip atdpraaqla sgsqtparts fqtqgfrrah pkvlgtihif
       61 tgivhvgfgl iltlsehsnp slpvasgilf wlgilllvsg sllveserrd spalvktccv
      121 vsvgvvlgtl vatgihgtai trvvpgcekp gpfqrrpewc lnreskmlsn sldsilvilg
      181 llefcvavav lafgydtvrq htysqlal
//
LOCUS       XP_041326383             684 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326383
VERSION     XP_041326383.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470449.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..684
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..684
                     /product="synaptotagmin-7 isoform X1"
                     /calculated_mol_wt=75199
     Region          416..540
                     /region_name="C2A_Synaptotagmin-7"
                     /note="C2A domain first repeat present in Synaptotagmin 7;
                     cd08386"
                     /db_xref="CDD:176032"
     Site            order(447,453,506,508,514)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176032"
     Region          548..683
                     /region_name="C2B_Synaptotagmin-7"
                     /note="C2 domain second repeat present in Synaptotagmin 7;
                     cd08405"
                     /db_xref="CDD:176050"
     Site            order(578,584,638,640)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176050"
     CDS             1..684
                     /gene="SYT7"
                     /coded_by="XM_041470449.1:1..2055"
                     /db_xref="GeneID:121355209"
ORIGIN      
        1 mylhpeaasa gtpsrdvllv saiitvslsv tivlcgicqw cqrkmgkryk tsletvgtpd
       61 ssrgrsekkt indldrdfwn nndntvqqkw ssyppkefil nispyapygd prlslngsll
      121 sgakltasaa aglsgdrdgr pgdkqrlged gmrssvsahs epgagkaarg rwhtvqshla
      181 agklslsnfe dstlstattl eyiptsagdp kfqrprtlvr qqslqqplsq hqranhsqpt
      241 tsqslghlqa hsgssaaaan srgsrggpar qgtaagskqr maggrsrsnp gswdhvvgqi
      301 rnrgldmksf legrmvvlsl vlglseqddf anipdlqpag tqpnqanaqg dkrlpaggka
      361 gnaapapgqp phdesdrkte phssvsdlvn sltsemlmls pgseddeghe gvsrenlgri
      421 qfsvgynfqe stltvkimka qelpakdfsg tsdpfvkiyl lpdkkhklet kvkrknlnph
      481 wnetflfegf pyekvvqrvl ylqvldydrf srndpigevs iplnkvdltq mqtfwkdlkp
      541 csdgsgsrge lllslcynps ansivvniik arnlkamdig gtsdpyvkvw lmykdkrvek
      601 kktvvmkrcl npvfnesfaf dipterlret tivitvmdkd rlsrndvigk iylswksgpg
      661 evkhwkdmia rprqavaqwh qlka
//
LOCUS       XP_041326384             475 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326384
VERSION     XP_041326384.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470450.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..475
                     /product="synaptotagmin-7 isoform X2"
                     /calculated_mol_wt=52393
     Region          207..331
                     /region_name="C2A_Synaptotagmin-7"
                     /note="C2A domain first repeat present in Synaptotagmin 7;
                     cd08386"
                     /db_xref="CDD:176032"
     Site            order(238,244,297,299,305)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176032"
     Region          339..474
                     /region_name="C2B_Synaptotagmin-7"
                     /note="C2 domain second repeat present in Synaptotagmin 7;
                     cd08405"
                     /db_xref="CDD:176050"
     Site            order(369,375,429,431)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176050"
     CDS             1..475
                     /gene="SYT7"
                     /coded_by="XM_041470450.1:1..1428"
                     /db_xref="GeneID:121355209"
ORIGIN      
        1 mylhpeaasa gtpsrdvllv saiitvslsv tivlcgicqw cqrkmgkryk tsletvgtpd
       61 ssrgrsekkt ingsllsgak ltasaaagls gdrdgrpgdk qrlgedgmrs svsahsepga
      121 gkaargrwht vqshlaagkl slsklpaggk agnaapapgq pphdesdrkt ephssvsdlv
      181 nsltsemlml spgseddegh egvsrenlgr iqfsvgynfq estltvkimk aqelpakdfs
      241 gtsdpfvkiy llpdkkhkle tkvkrknlnp hwnetflfeg fpyekvvqrv lylqvldydr
      301 fsrndpigev siplnkvdlt qmqtfwkdlk pcsdgsgsrg elllslcynp sansivvnii
      361 karnlkamdi ggtsdpyvkv wlmykdkrve kkktvvmkrc lnpvfnesfa fdipterlre
      421 ttivitvmdk drlsrndvig kiylswksgp gevkhwkdmi arprqavaqw hqlka
//
LOCUS       XP_041326385             447 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-7 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326385
VERSION     XP_041326385.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470451.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..447
                     /product="synaptotagmin-7 isoform X3"
                     /calculated_mol_wt=50413
     Region          179..303
                     /region_name="C2A_Synaptotagmin-7"
                     /note="C2A domain first repeat present in Synaptotagmin 7;
                     cd08386"
                     /db_xref="CDD:176032"
     Site            order(210,216,269,271,277)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176032"
     Region          311..446
                     /region_name="C2B_Synaptotagmin-7"
                     /note="C2 domain second repeat present in Synaptotagmin 7;
                     cd08405"
                     /db_xref="CDD:176050"
     Site            order(341,347,401,403)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176050"
     CDS             1..447
                     /gene="SYT7"
                     /coded_by="XM_041470451.1:1..1344"
                     /db_xref="GeneID:121355209"
ORIGIN      
        1 mylhpeaasa gtpsrdvllv saiitvslsv tivlcgicqw cqrkmgkryk tsletvgtpd
       61 ssrgrsekkt indldrdfwn nndntvqqkw ssyppkefil nispyapygd prlslklpag
      121 gkagnaapap gqpphdesdr ktephssvsd lvnsltseml mlspgsedde ghegvsrenl
      181 griqfsvgyn fqestltvki mkaqelpakd fsgtsdpfvk iyllpdkkhk letkvkrknl
      241 nphwnetflf egfpyekvvq rvlylqvldy drfsrndpig evsiplnkvd ltqmqtfwkd
      301 lkpcsdgsgs rgelllslcy npsansivvn iikarnlkam diggtsdpyv kvwlmykdkr
      361 vekkktvvmk rclnpvfnes fafdipterl rettivitvm dkdrlsrndv igkiylswks
      421 gpgevkhwkd miarprqava qwhqlka
//
LOCUS       XP_041326387             403 aa            linear   VRT 06-MAY-2021
DEFINITION  synaptotagmin-7 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326387
VERSION     XP_041326387.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470453.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="synaptotagmin-7 isoform X4"
                     /calculated_mol_wt=45201
     Region          135..259
                     /region_name="C2A_Synaptotagmin-7"
                     /note="C2A domain first repeat present in Synaptotagmin 7;
                     cd08386"
                     /db_xref="CDD:176032"
     Site            order(166,172,225,227,233)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:176032"
     Region          267..402
                     /region_name="C2B_Synaptotagmin-7"
                     /note="C2 domain second repeat present in Synaptotagmin 7;
                     cd08405"
                     /db_xref="CDD:176050"
     Site            order(297,303,357,359)
                     /site_type="other"
                     /note="Ca2+ binding pocket [ion binding]"
                     /db_xref="CDD:176050"
     CDS             1..403
                     /gene="SYT7"
                     /coded_by="XM_041470453.1:1..1212"
                     /db_xref="GeneID:121355209"
ORIGIN      
        1 mylhpeaasa gtpsrdvllv saiitvslsv tivlcgicqw cqrkmgkryk tsletvgtpd
       61 ssrgrsekkt iklpaggkag naapapgqpp hdesdrktep hssvsdlvns ltsemlmlsp
      121 gseddegheg vsrenlgriq fsvgynfqes tltvkimkaq elpakdfsgt sdpfvkiyll
      181 pdkkhkletk vkrknlnphw netflfegfp yekvvqrvly lqvldydrfs rndpigevsi
      241 plnkvdltqm qtfwkdlkpc sdgsgsrgel llslcynpsa nsivvniika rnlkamdigg
      301 tsdpyvkvwl mykdkrvekk ktvvmkrcln pvfnesfafd ipterlrett ivitvmdkdr
      361 lsrndvigki ylswksgpge vkhwkdmiar prqavaqwhq lka
//
LOCUS       XP_041326388             334 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger Ran-binding domain-containing protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326388
VERSION     XP_041326388.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470454.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..334
                     /product="zinc finger Ran-binding domain-containing
                     protein 2 isoform X1"
                     /calculated_mol_wt=37682
     Region          11..35
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          13..34
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          67..91
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          69..88
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..334
                     /gene="ZRANB2"
                     /coded_by="XM_041470454.1:86..1090"
                     /db_xref="GeneID:121355213"
ORIGIN      
        1 matknfrvsd gdwicpdkkc gnvnfarrts cnrcgrektt eakmmkaggt eigktlaeks
       61 rglfsandwq cktcgnvnwa rrsecnmcnt pkyakleert gygggfnere nveyierees
      121 dgeydefgrk kkkyrgkpvg pasilkeved kesegedeed ededlskykl dedededdad
      181 lskynldase eedtnkkkkp prrsrsksrs shsrsssrss shsssrsrsr shsrsssssr
      241 srsrsssreq srsrgsksrs ssrsyrgsst prkrscsssr sssspergkk rsrsrssssg
      301 drkkrrsrsr sperrrrsss gsshsgsrts skkk
//
LOCUS       XP_041326389             289 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger Ran-binding domain-containing protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326389
VERSION     XP_041326389.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470455.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..289
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..289
                     /product="zinc finger Ran-binding domain-containing
                     protein 2 isoform X2"
                     /calculated_mol_wt=32648
     Region          11..35
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          13..34
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          67..91
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          69..88
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..289
                     /gene="ZRANB2"
                     /coded_by="XM_041470455.1:86..955"
                     /db_xref="GeneID:121355213"
ORIGIN      
        1 matknfrvsd gdwicpdkkc gnvnfarrts cnrcgrektt eakmmkaggt eigktlaeks
       61 rglfsandwq cktcgnvnwa rrsecnmcnt pkyakleert gygggfnere nveyierees
      121 dgeydefgrk kkkyrgkpvg pasilkeved kesegedeed ededlskykl dedededdad
      181 lskynldase eedtnkkkkp prrsrsksrs shsrsssrss shsssrsrsr shsrsssssr
      241 srsrsssreq srsrgskssq tcwvsapgva ttavfteeqr fwcerlsla
//
LOCUS       XP_041326390             284 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger Ran-binding domain-containing protein 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326390
VERSION     XP_041326390.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470456.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="zinc finger Ran-binding domain-containing
                     protein 2 isoform X3"
                     /calculated_mol_wt=31978
     Region          11..35
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          13..34
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          67..91
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          69..88
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..284
                     /gene="ZRANB2"
                     /coded_by="XM_041470456.1:86..940"
                     /db_xref="GeneID:121355213"
ORIGIN      
        1 matknfrvsd gdwicpdkkc gnvnfarrts cnrcgrektt eakmmkaggt eigktlaeks
       61 rglfsandwq cktcgnvnwa rrsecnmcnt pkyakleert gygggfnere nveyierees
      121 dgeydefgrk kkkyrgkpvg pasilkeved kesegedeed ededlskykl dedededdad
      181 lskynldase eedtnkkkkp prrsrsksrs shsrsssrss shsssrsrsr shsrsssssr
      241 srsrsssreq srsrgsksrl agslhrvlpp qlcslrsrgf garg
//
LOCUS       XP_041326391             277 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger Ran-binding domain-containing protein 2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326391
VERSION     XP_041326391.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470457.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="zinc finger Ran-binding domain-containing
                     protein 2 isoform X4"
                     /calculated_mol_wt=31190
     Region          11..35
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          13..34
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          67..91
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          69..88
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..277
                     /gene="ZRANB2"
                     /coded_by="XM_041470457.1:86..919"
                     /db_xref="GeneID:121355213"
ORIGIN      
        1 matknfrvsd gdwicpdkkc gnvnfarrts cnrcgrektt eakmmkaggt eigktlaeks
       61 rglfsandwq cktcgnvnwa rrsecnmcnt pkyakleert gygggfnere nveyierees
      121 dgeydefgrk kkkyrgkpvg pasilkeved kesegedeed ededlskykl dedededdad
      181 lskynldase eedtnkkkkp prrsrsksrs shsrsssrss shsssrsrsr fsgslamcgs
      241 vvgqrgalle weevaeeavt mqprqiqgmd tvgiswk
//
LOCUS       XP_041326392             277 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger Ran-binding domain-containing protein 2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326392
VERSION     XP_041326392.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470458.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="zinc finger Ran-binding domain-containing
                     protein 2 isoform X4"
                     /calculated_mol_wt=31190
     Region          11..35
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          13..34
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     Region          67..91
                     /region_name="ZnF_RBZ"
                     /note="Zinc finger domain; smart00547"
                     /db_xref="CDD:197784"
     Region          69..88
                     /region_name="RanBP2-type Zn finger"
                     /note="RanBP2-type Zn finger [structural motif]"
                     /db_xref="CDD:275376"
     CDS             1..277
                     /gene="ZRANB2"
                     /coded_by="XM_041470458.1:86..919"
                     /db_xref="GeneID:121355213"
ORIGIN      
        1 matknfrvsd gdwicpdkkc gnvnfarrts cnrcgrektt eakmmkaggt eigktlaeks
       61 rglfsandwq cktcgnvnwa rrsecnmcnt pkyakleert gygggfnere nveyierees
      121 dgeydefgrk kkkyrgkpvg pasilkeved kesegedeed ededlskykl dedededdad
      181 lskynldase eedtnkkkkp prrsrsksrs shsrsssrss shsssrsrsr fsgslamcgs
      241 vvgqrgalle weevaeeavt mqprqiqgmd tvgiswk
//
LOCUS       XP_041326394             389 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat domain-containing protein 13C [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326394
VERSION     XP_041326394.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470460.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..389
                     /product="ankyrin repeat domain-containing protein 13C"
                     /calculated_mol_wt=44617
     Region          <3..>47
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          107..380
                     /region_name="GPCR_chapero_1"
                     /note="GPCR-chaperone; pfam11904"
                     /db_xref="CDD:463391"
     CDS             1..389
                     /gene="ANKRD13C"
                     /coded_by="XM_041470460.1:107..1276"
                     /db_xref="GeneID:121355214"
ORIGIN      
        1 mlghkecahl llahnapvkv knaqgwspla eaisygdrqm isallrklkq qsresveekr
       61 prllkalkel gdfylelhwd fqswvpllsr ilpsdackih kqginirldt tlidftdmkc
      121 qrgdlsfifn gdaapsesfv vldneqkvyq rihheeseme teeevdilms sdiysatlst
      181 ksitftraqt gwlfredkte rvgnfladfy lvnglvlesr krrehlseed ilrnkaimes
      241 lskggnlmeq nfepvrrqsl tppspntisw eeyisaesgk aphlgrelvc keskktfkat
      301 iamsqefplg iesllnvlev iapfkhfnkl refvqmklpp gfpvkldipv fptitatvtf
      361 qefrydefdd siftipddyk edpsrfpdl
//
LOCUS       XP_041326395             178 aa            linear   VRT 06-MAY-2021
DEFINITION  cystathionine gamma-lyase-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326395
VERSION     XP_041326395.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470461.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..178
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..178
                     /product="cystathionine gamma-lyase-like"
                     /calculated_mol_wt=19645
     Region          11..>70
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Region          <87..176
                     /region_name="MetC"
                     /note="Cystathionine beta-lyase/cystathionine
                     gamma-synthase [Amino acid transport and metabolism];
                     COG0626"
                     /db_xref="CDD:440391"
     CDS             1..178
                     /gene="LOC121355215"
                     /coded_by="XM_041470461.1:19..555"
                     /db_xref="GeneID:121355215"
ORIGIN      
        1 maggnapgfl psfehfatha ihfgqepeqw nskavvppit lsttfkqqvp gkdeeykyir
       61 fgnpnrhvle tvmtvmitqs atiyklglss hpqykvvkkq ctgvsgmvsf hisgkkenai
      121 aflknlksfg ytmthgqmda ktkeelkitd tlirlsvgle datdlvqdlk qalkaafe
//
LOCUS       XP_041326396            1455 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041326396
VERSION     XP_041326396.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470462.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1455
                     /product="leucine-rich repeat-containing protein 7"
                     /calculated_mol_wt=162480
     Region          24..47
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          46..104
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          48..70
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          71..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          78..447
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          94..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          279..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          324..346
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          347..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          370..392
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          1365..1451
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1374..1380,1400,1403,1431,1435,1438..1439)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1455
                     /gene="LRRC7"
                     /coded_by="XM_041470462.1:1..4368"
                     /db_xref="GeneID:121355216"
ORIGIN      
        1 mtskrkligr lvpcrcfrge eeivsvldys hcglqqvpke vfnfertlee lyldanqiee
       61 lpkqlfncqa lrklsipdnd lsslptsias lvnlreldis kngiqdfpen ikcckcltii
      121 easvnpvskl pdgftqllnl tqlylndafl eflpanfgrl vklrilelre nhlktlpksm
      181 hkltqlerld lgnnefselp evleqiqnlk elwmdnnslq vlpgsigklk qlvyldvskn
      241 rietvdldis gcegledlll ssnmlqqlpd sigllkrltt lkvddnqlti lpnaignlsl
      301 leefdcscne leslpstigy lhnlrtlavd enflpelpre igscknvtvm slrsnklefl
      361 pdeigqmqkl rvlnlsdnrl knlpftftkl kelaalwlsd nqskaliplq teahpetkqr
      421 vltnymfpqq prsdedfqsd sdsfnptlwe eqrqqrmtva fefedkkeee enpgkveinl
      481 kryptpyped lknmvksvqn lvskpslgvr penaapaast dptgkdkyeh kwppltpkei
      541 svedafghpg semrigelrp smpetplypp klvllgkdkk estdeseadk ihclnnsvss
      601 gtysdyspsq assgssnahv kmgslqttak eavnnslwgn rlaqsfpqpl etkpllsqre
      661 aapagnvpar perrplsdaf tdswndgshy dntgfvaees aaenagtnpl lstksrsssa
      721 hgrrplirqd rivgiplele qpalrnthds evpppnpwqn wtrtpspfed rtafpskles
      781 tpntsplper kdhvkespem tstftpgipw eyhdananrs ltnvfshmhc rpdpsknvis
      841 isksterlsp mmrdlktnkf kksqsideid igaykvynip lenyasgndt vgphervdkl
      901 lgpehgvlsm srsqsvpmld delltygsvk vqpqhkasvt kkvyqfdqsf npqgavelpa
      961 dkrllppfql naeylpqpak slpqelvspr gyrgyapvep mfsfsqpsvg eepvaapfpg
     1021 paarpgflrr adslvssaem svfrrvgepq elppadrygr apfrgaperq gsmavpeaqf
     1081 lkrngryede hpsyqevkaq tgsfpvknlt qrrplsarsy stesygtaqt rpvsarptma
     1141 allekipsdy nlgnygdkps dssdikprpp pgkgnescak mpadwrqqll rhiearrldr
     1201 saaykhhtvs lgmlhsggvs amhagrsmtl nlqpkskfen qmlqelplpk tpsqqsslld
     1261 ngqdevavgs pwtpyplgrr dvppdtvtkk agshiqtlmg sqslqhrsre qqqyegsmnk
     1321 vtiqqyqppl piqipssqgs rapqpqrcli qtkgqrstda yqeqfcvrie knpglgfsis
     1381 ggisgqgnpf kpsdkgifvt rvqpdgpass llqpgdkilq anghsfvhle hekavlllks
     1441 fqntvdlviq reltv
//
LOCUS       XP_041326397             363 aa            linear   VRT 06-MAY-2021
DEFINITION  prostaglandin E2 receptor EP3 subtype [Pyrgilauda ruficollis].
ACCESSION   XP_041326397
VERSION     XP_041326397.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470463.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="prostaglandin E2 receptor EP3 subtype"
                     /calculated_mol_wt=38671
     Region          33..331
                     /region_name="7tm_GPCRs"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; cl28897"
                     /db_xref="CDD:475119"
     Region          35..59
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:410628"
     Region          73..95
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:410628"
     Region          115..137
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:410628"
     Region          160..176
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:410628"
     Region          203..222
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:410628"
     Region          253..275
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:410628"
     Region          298..323
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:410628"
     CDS             1..363
                     /gene="PTGER3"
                     /coded_by="XM_041470463.1:15..1106"
                     /db_xref="GeneID:121355217"
ORIGIN      
        1 mspwqqrppn asaaggpgpr gngtgraaer gsavsvaipl tmmltgvvgn alamllvsrs
       61 yrakgsrrkr sfllcigsla ltdmlgqllt spivisvyls grpwaamdps grlcdffgfs
      121 mtvfglcpll iasamavera lairaphwya shmsprater glaaiwaagv afallplagl
      181 gryalqwpgt wcfistaggs afaaafaalg llslavtgac nlatiealvs rcrakagaaq
      241 pgsrwgriat etllqllgim cvlsacwspl lvtmlrmvse qagpcrggwq rweprrecdl
      301 pltavrlasl nqildpwvyl llrrillrkf cqaasavshc snaecrdrdr altlseeirr
      361 taa
//
LOCUS       XP_041326398             458 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/arginine-rich splicing factor 11 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326398
VERSION     XP_041326398.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470464.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..458
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..458
                     /product="serine/arginine-rich splicing factor 11 isoform
                     X1"
                     /calculated_mol_wt=51291
     Region          9..88
                     /region_name="RRM_SRSF11"
                     /note="RNA recognition motif (RRM) found in
                     serine/arginine-rich splicing factor 11 (SRSF11) and
                     similar proteins; cd12518"
                     /db_xref="CDD:409940"
     CDS             1..458
                     /gene="SRSF11"
                     /coded_by="XM_041470464.1:149..1525"
                     /db_xref="GeneID:121355218"
ORIGIN      
        1 masssgtdvi qvtnvspsas seqmrtlfgf lgkieelrlf ppddsplpvs srvcfvkfhd
       61 pdsavvaqhl tntvfvdral ivvpyaegvi pdetkalsll apanavagll pgggllptpn
      121 plsqigavpl aalgapaldp alaalglpga nlnsqslaad qllklmstvd pklnhvaagl
      181 vspslksdts skeieeamkr vreaqslisa aiepdkkdek rrhsrsrsrs rrrrtpsssr
      241 hrrsrsrsrr rshsksrsrr rsksprrrrs hsrersrrsr stsktrdkkk eekekkrskt
      301 ppksysttrr srstsrerrr rrsrsgtrsp kkprspkrkm srspsprrhk kekkkdkdke
      361 rsrdererst skkkkskdke kdrdrksesd kdvkvtrdyd eeeqgydsek ekkeekkvad
      421 apspkgkepg aekgsgdpgr eskvngddhh eedmdmsd
//
LOCUS       XP_041326399             424 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/arginine-rich splicing factor 11 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326399
VERSION     XP_041326399.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470465.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="serine/arginine-rich splicing factor 11 isoform
                     X2"
                     /calculated_mol_wt=47646
     CDS             1..424
                     /gene="SRSF11"
                     /coded_by="XM_041470465.1:2973..4247"
                     /db_xref="GeneID:121355218"
ORIGIN      
        1 mlninshqal yfsqhkyfqq tqvvyqgdfa gcicvfgasg lgctlmpgcf pagvipdetk
       61 alsllapana vagllpgggl lptpnplsqi gavplaalga paldpalaal glpganlnsq
      121 slaadqllkl mstvdpklnh vaaglvspsl ksdtsskeie eamkrvreaq slisaaiepd
      181 kkdekrrhsr srsrsrrrrt psssrhrrsr srsrrrshsk srsrrrsksp rrrrshsrer
      241 srrsrstskt rdkkkeekek krsktppksy sttrrsrsts rerrrrrsrs gtrspkkprs
      301 pkrkmsrsps prrhkkekkk dkdkersrde rerstskkkk skdkekdrdr ksesdkdvkq
      361 vtrdydeeeq gydsekekke ekkvadapsp kgkepgaekg sgdpgreskv ngddhheedm
      421 dmsd
//
LOCUS       XP_041326400             424 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/arginine-rich splicing factor 11 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326400
VERSION     XP_041326400.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470466.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="serine/arginine-rich splicing factor 11 isoform
                     X2"
                     /calculated_mol_wt=47646
     CDS             1..424
                     /gene="SRSF11"
                     /coded_by="XM_041470466.1:3342..4616"
                     /db_xref="GeneID:121355218"
ORIGIN      
        1 mlninshqal yfsqhkyfqq tqvvyqgdfa gcicvfgasg lgctlmpgcf pagvipdetk
       61 alsllapana vagllpgggl lptpnplsqi gavplaalga paldpalaal glpganlnsq
      121 slaadqllkl mstvdpklnh vaaglvspsl ksdtsskeie eamkrvreaq slisaaiepd
      181 kkdekrrhsr srsrsrrrrt psssrhrrsr srsrrrshsk srsrrrsksp rrrrshsrer
      241 srrsrstskt rdkkkeekek krsktppksy sttrrsrsts rerrrrrsrs gtrspkkprs
      301 pkrkmsrsps prrhkkekkk dkdkersrde rerstskkkk skdkekdrdr ksesdkdvkq
      361 vtrdydeeeq gydsekekke ekkvadapsp kgkepgaekg sgdpgreskv ngddhheedm
      421 dmsd
//
LOCUS       XP_041326401             294 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/arginine-rich splicing factor 11 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326401
VERSION     XP_041326401.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470467.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="serine/arginine-rich splicing factor 11 isoform
                     X3"
                     /calculated_mol_wt=34552
     CDS             1..294
                     /gene="SRSF11"
                     /coded_by="XM_041470467.1:3911..4795"
                     /db_xref="GeneID:121355218"
ORIGIN      
        1 mstvdpklnh vaaglvspsl ksdtsskeie eamkrvreaq slisaaiepd kkdekrrhsr
       61 srsrsrrrrt psssrhrrsr srsrrrshsk srsrrrsksp rrrrshsrer srrsrstskt
      121 rdkkkeekek krsktppksy sttrrsrsts rerrrrrsrs gtrspkkprs pkrkmsrsps
      181 prrhkkekkk dkdkersrde rerstskkkk skdkekdrdr ksesdkdvkq vtrdydeeeq
      241 gydsekekke ekkvadapsp kgkepgaekg sgdpgreskv ngddhheedm dmsd
//
LOCUS       XP_041326402             668 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 40 [Pyrgilauda ruficollis].
ACCESSION   XP_041326402
VERSION     XP_041326402.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470468.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 12% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..668
                     /product="leucine-rich repeat-containing protein 40"
                     /calculated_mol_wt=73300
     Region          143..482
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          149..171
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          172..194
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          195..217
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          218..240
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          241..286
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          287..309
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          310..331
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          332..355
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          356..>656
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          356..378
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          464..516
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          517..539
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          540..562
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          563..585
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          586..609
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          610..632
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          633..652
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..668
                     /gene="LRRC40"
                     /coded_by="XM_041470468.1:1..2007"
                     /db_xref="GeneID:121355220"
ORIGIN      
        1 mgfkappnpn hpeiplrleq tlqiiepshp qpargcsaaa hsangdsktn kltsaararp
       61 rapfrhggag nggagagpgp pagprlpggp avpqgllrla rrsgqlnlag rglthvpehv
      121 wrinldtpee aqqnlsfgaa drwweqtdlt klilasnklq slsedvqllp altmldvhdn
      181 qltslpsalg qlenlqkldv shnklrslpe ellqlprlrs llvqhnelsq lpeglgqlls
      241 leeldvsnnq ltavptsfal lvnlvrlnla cnqlkelpad lsamkslrql dctknyletv
      301 ppklatmasl eqlylrknkl rslpelpsck llkelhagen qieilnaenl kqlsslcvle
      361 lrdnkikavp eeitvlqkle rldlanndis rlpytlgnlp qlkflalegn plrtirrdll
      421 qkgtqellky lrskiqddgp gpneeppvta mtlpsqskvn ihaittlkll eysdkqaaei
      481 peavfdavga npvatvnfsk nqlreipprl velkdsvcdv slafnkissi sselcllqkl
      541 thldlrnnvl talpeemeal krlhtinlaf nrfkvfpsvl yhlpaletil lsnnqvgsid
      601 pvqlkgldkl gtldlqnndl lqvppelgnc enlrsllleg npfrtpraav lakgtaavle
      661 ylrsrips
//
LOCUS       XP_041326403             204 aa            linear   VRT 06-MAY-2021
DEFINITION  cystathionine gamma-lyase-like, partial [Pyrgilauda ruficollis].
ACCESSION   XP_041326403
VERSION     XP_041326403.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470469.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523778.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..204
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>204
                     /product="cystathionine gamma-lyase-like"
     Region          17..>203
                     /region_name="AAT_I"
                     /note="Aspartate aminotransferase (AAT) superfamily (fold
                     type I) of pyridoxal phosphate (PLP)-dependent enzymes.
                     PLP combines with an alpha-amino acid to form a compound
                     called a Schiff base or aldimine intermediate, which
                     depending on the reaction, is the...; cl18945"
                     /db_xref="CDD:450240"
     Site            order(88..89,92,144,174,177,196,199)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate binding pocket [chemical
                     binding]"
                     /db_xref="CDD:99738"
     Site            199
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:99738"
     CDS             1..204
                     /gene="LOC121355221"
                     /coded_by="XM_041470469.1:47..>659"
                     /db_xref="GeneID:121355221"
ORIGIN      
        1 magkgmqgfl ppfkhfatda vhagqepeqw rsgalvppis lsttfkqrap gehagydyir
       61 sgnptrdcle kavatldgak yslayssgla allnichllk agdtiicmdd vyggeystqg
      121 lqpsfpgnsl twsffgfvql vwletptnpt lkvidiraca divhrhpgvl lavdnsfmsa
      181 yfqrplalga dicmssatky mnge
//
LOCUS       XP_041326405             688 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: protocadherin gamma-B5-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326405
VERSION     XP_041326405.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470471.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523783.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio   :: 3% of CDS bases
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..688
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..>688
                     /product="LOW QUALITY PROTEIN: protocadherin
                     gamma-B5-like"
     Region          <1..24
                     /region_name="Cadherin_2"
                     /note="Cadherin-like; pfam08266"
                     /db_xref="CDD:462413"
     Region          52..150
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(56..57,113,115,146,148..149)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          158..309
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(165..166,272,274,305,307..308)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          318..419
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     Site            order(324..325,382,384,415,417..418)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:206637"
     Region          451..537
                     /region_name="Cadherin_repeat"
                     /note="Cadherin tandem repeat domain; cd11304"
                     /db_xref="CDD:206637"
     CDS             1..688
                     /gene="LOC121355223"
                     /coded_by="XM_041470471.1:<1..>2064"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 2 bases in 1 codon"
                     /db_xref="GeneID:121355223"
ORIGIN      
        1 rldreeicga sptcsvsfev llhnplnifh vevaiedvnd hspvfsktal dleigelipp
       61 garfplemar dadagsnsll tyqltsdssf slsvkektgg kklpelvleg pldrekqssf
      121 elvltavdsg eptmsgtvli rinvtdandn ppvfsksvye arvaenlpag slvlrvwatd
      181 advgsngrls ysfgnvpddv lslfaidses geirtvgpld feeenkyifg leatdgggxn
      241 gqvscelsge aplsivassg gsykvvtasa ldreqasehr vtvvardrgr palwsstelv
      301 levsdvndna pvfeeaaysa yvaennaaga lvlrvqarda dagangrvsy wlaggsagaa
      361 gaaplvsvea rsgalyaqrs ldyeqcreft vavraqdggs parsstatvr vfvldrndna
      421 prvlwpaaag ggaaaapgea pgaaatpfev vprsaeagyl vakvvavdad agrnawlsye
      481 lvpasepalf rvglhsgevr taravserda akqrvvavvk dhgqpalsat atlhvvlaes
      541 lqealpelse rpagaeaaaa aelqfylvla lallsallvl svalavlarl rragppavlr
      601 clgaqrfsla gaafpadfce gtlpysynlc vaaparavpe aawppppvpi lsaeellggd
      661 scekpspngs aiggevsanp dlpqvckt
//
LOCUS       XP_041326406             338 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type I cytoskeletal 15-like, partial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326406
VERSION     XP_041326406.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470472.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523788.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the carboxy end.
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..>338
                     /product="keratin, type I cytoskeletal 15-like"
     Region          88..>337
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..338
                     /gene="LOC121355224"
                     /coded_by="XM_041470472.1:1..>1014"
                     /db_xref="GeneID:121355224"
ORIGIN      
        1 mscsikrtss tsyrsggggg gacggssgrs ssmscrryas svigggsygg aacggygggl
       61 smgglaggfg ggfagscgpg gdlllsgnek ltmqnlndrl asyldkvrml eeenaqlehh
      121 irewyrkqap svskdyssyy qtieqlqsqi isatvdnnrm lldidnskmt addfrmkyen
      181 elvirqtvea dinglrnile gltttrssle seleslkdel ialkrnheee mrqlqsqtgg
      241 dvsvevnaap gqdltkilnd lrdeyeqiie knrreveqwy evkiqevnqq vtsssqdiqt
      301 sshqlselrr emqnleielq aqlstkssle nslsetes
//
LOCUS       XP_041326407             686 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCCH domain-containing protein 11A isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326407
VERSION     XP_041326407.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470473.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..686
                     /product="zinc finger CCCH domain-containing protein 11A
                     isoform X1"
                     /calculated_mol_wt=73770
     Region          <188..473
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <517..>602
                     /region_name="PRK14954"
                     /note="DNA polymerase III subunits gamma and tau;
                     Provisional"
                     /db_xref="CDD:184918"
     CDS             1..686
                     /gene="ZC3H11A"
                     /coded_by="XM_041470473.1:60..2120"
                     /db_xref="GeneID:121355225"
ORIGIN      
        1 mvqlqqnkls vqsnpspqlr gvmkvensen vpspthppvv inaadddedd ddqlseegee
       61 tktpvqpppt ethnglrvis trksnpsakq ddnlnfgikt leeiklkklk ekakkqgegp
      121 sgvavdplqa rsipvpeken vrtvlrtvtl sskegedpvi qlnlpdrlgk rktvmggktf
      181 lplrrnvadr lgrkaelqen sekapkrgtv qvlkslkerl glpseqsste tdkaakpiee
      241 irvktleeir leranqrrge ppakipgegr ktedpnsgak pspaarsksl tgalveknhk
      301 rlgeekekpe efssraksea dprkqnipap agagrvqlae agrakgagev riktleeikr
      361 ekalrlqqsg enlpaaaapp eaalrgrkll rvtkllapgr eekmivelnk pspkngsapa
      421 ensgnsgiqv ksleeimwek rqqkqrqeek lqqgagaipa enqekiqdkn qektpgsgsp
      481 eaavgpaqlg rrrggkpaed gvgtpekepg kkgaqlperr grakskvclk pldakappkq
      541 plkrkgpegd apavvavkpl satsgdtqep pakvvppspe dspgsnprre nsqgspelqp
      601 gsqghslahs egsgssssss sssleaplkl rrlssagaak aalsveddfe kliweisggk
      661 leaeidldpg kdeddlllel semids
//
LOCUS       XP_041326408             686 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCCH domain-containing protein 11A isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326408
VERSION     XP_041326408.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470474.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..686
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..686
                     /product="zinc finger CCCH domain-containing protein 11A
                     isoform X2"
                     /calculated_mol_wt=73740
     Region          <188..473
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..686
                     /gene="ZC3H11A"
                     /coded_by="XM_041470474.1:60..2120"
                     /db_xref="GeneID:121355225"
ORIGIN      
        1 mvqlqqnkls vqsnpspqlr gvmkvensen vpspthppvv inaadddedd ddqlseegee
       61 tktpvqpppt ethnglrvis trksnpsakq ddnlnfgikt leeiklkklk ekakkqgegp
      121 sgvavdplqa rsipvpeken vrtvlrtvtl sskegedpvi qlnlpdrlgk rktvmggktf
      181 lplrrnvadr lgrkaelqen sekapkrgtv qvlkslkerl glpseqsste tdkaakpiee
      241 irvktleeir leranqrrge ppakipgegr ktedpnsgak pspaarsksl tgalveknhk
      301 rlgeekekpe efssraksea dprkqnipap agagrvqlae agrakgagev riktleeikr
      361 ekalrlqqsg enlpaaaapp eaalrgrkll rvtkllapgr eekmivelnk pspkngsapa
      421 ensgnsgiqv ksleeimwek rqqkqrqeek lqqgagaipa enqekiqdkn qektpgsgsp
      481 eaavgpaqlg rrrggkpaed gvgtpekepg kkgaqlperr grakskvclk pldakappkq
      541 plkrkgpegd apavvavkpl satsgdtqep pakvvppspv dspgsnprre nsqgspelqp
      601 gsqghslahs egsgssssss sssleaplkl rrlssagaak aalsveddfe kliweisggk
      661 leaeidldpg kdeddlllel semids
//
LOCUS       XP_041326409             685 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger CCCH domain-containing protein 11A isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326409
VERSION     XP_041326409.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470475.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..685
                     /product="zinc finger CCCH domain-containing protein 11A
                     isoform X3"
                     /calculated_mol_wt=73713
     Region          <187..472
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          <516..>601
                     /region_name="PRK14954"
                     /note="DNA polymerase III subunits gamma and tau;
                     Provisional"
                     /db_xref="CDD:184918"
     CDS             1..685
                     /gene="ZC3H11A"
                     /coded_by="XM_041470475.1:60..2117"
                     /db_xref="GeneID:121355225"
ORIGIN      
        1 mvqlqqnkls vqsnpspqlr gvmkvensen vpspthppvv inaadddedd ddqlseegee
       61 tktpvqpppt ethnglrvis trksnpsakq ddnlnfgikt leeiklkklk ekakkqegps
      121 gvavdplqar sipvpekenv rtvlrtvtls skegedpviq lnlpdrlgkr ktvmggktfl
      181 plrrnvadrl grkaelqens ekapkrgtvq vlkslkerlg lpseqsstet dkaakpieei
      241 rvktleeirl eranqrrgep pakipgegrk tedpnsgakp spaarskslt galveknhkr
      301 lgeekekpee fssraksead prkqnipapa gagrvqlaea grakgagevr iktleeikre
      361 kalrlqqsge nlpaaaappe aalrgrkllr vtkllapgre ekmivelnkp spkngsapae
      421 nsgnsgiqvk sleeimwekr qqkqrqeekl qqgagaipae nqekiqdknq ektpgsgspe
      481 aavgpaqlgr rrggkpaedg vgtpekepgk kgaqlperrg rakskvclkp ldakappkqp
      541 lkrkgpegda pavvavkpls atsgdtqepp akvvppsped spgsnprren sqgspelqpg
      601 sqghslahse gsgsssssss ssleaplklr rlssagaaka alsveddfek liweisggkl
      661 eaeidldpgk deddlllels emids
//
LOCUS       XP_041326411              92 aa            linear   VRT 06-MAY-2021
DEFINITION  small nuclear ribonucleoprotein E isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326411
VERSION     XP_041326411.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470477.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..92
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..92
                     /product="small nuclear ribonucleoprotein E isoform X1"
                     /calculated_mol_wt=10645
     Region          11..89
                     /region_name="Sm_E"
                     /note="Sm protein E; cd01718"
                     /db_xref="CDD:212465"
     Site            order(24,36,38,41,48..51,55,63,72,74,76..80,83..89)
                     /site_type="other"
                     /note="heptamer interface [polypeptide binding]"
                     /db_xref="CDD:212465"
     Site            order(33..39,41..53,55..59)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212465"
     Site            order(51,53..55,80,82)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:212465"
     Site            76..87
                     /site_type="other"
                     /note="Sm2 motif"
                     /db_xref="CDD:212465"
     CDS             1..92
                     /gene="SNRPE"
                     /coded_by="XM_041470477.1:104..382"
                     /db_xref="GeneID:121355226"
ORIGIN      
        1 mayrgqgqkv qkvmvqpinl ifrylqnrsr iqvwlyeqvn mriegciigf deymnlvldd
       61 aeeihsktks rkqlgrimlk gdnitllqsv ss
//
LOCUS       XP_041326412              89 aa            linear   VRT 06-MAY-2021
DEFINITION  small nuclear ribonucleoprotein E isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326412
VERSION     XP_041326412.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470478.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..89
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..89
                     /product="small nuclear ribonucleoprotein E isoform X2"
                     /calculated_mol_wt=10119
     Region          11..76
                     /region_name="Sm_E"
                     /note="Sm protein E; cd01718"
                     /db_xref="CDD:212465"
     Site            order(33..39,41..53,55..59)
                     /site_type="other"
                     /note="Sm1 motif"
                     /db_xref="CDD:212465"
     CDS             1..89
                     /gene="SNRPE"
                     /coded_by="XM_041470478.1:105..374"
                     /db_xref="GeneID:121355226"
ORIGIN      
        1 mayrgqgqkv qkvmvqpinl ifrylqnrsr iqvwlyeqvn mriegciigf deymnlvldd
       61 aeeihsktks rkqlgraggl gpkirglgp
//
LOCUS       XP_041326413             495 aa            linear   VRT 06-MAY-2021
DEFINITION  major facilitator superfamily domain-containing protein 4A
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326413
VERSION     XP_041326413.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470479.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="major facilitator superfamily domain-containing
                     protein 4A"
                     /calculated_mol_wt=54213
     Region          18..461
                     /region_name="MFS"
                     /note="Major Facilitator Superfamily; cl28910"
                     /db_xref="CDD:475125"
     Site            order(28..29,32..33,36,68,101..102,104..106,109,131,
                     134..135,138,296,299..300,303..305,308,337,341,391..392,
                     396,400,415,418..419,422..423,426)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:349949"
     CDS             1..495
                     /gene="MFSD4A"
                     /coded_by="XM_041470479.1:90..1577"
                     /db_xref="GeneID:121355227"
ORIGIN      
        1 mwwdervsar frrnlqptlt ywsvffsfgl ciaflgptll dlrcqtqssl sqitwvffsq
       61 qfclllgscl ggvfkrttgc ltasaknvtt vvrnsplseg gttvdsvgrs fvvdaairks
      121 lenswvtqal hffvgfgall spliadpfls dtncilangt anassnlphi rkslvphhpg
      181 nlshydlpmk gmvvtrvsya fwimalinlp vpiavfflly kermvpcfng sshpllsade
      241 laletrpgdk delstagqrp htaaghedlf sccqsknfqg vsftyfavhi tgalvlfmtd
      301 givgeysgfv ysyaveepla vvhkvagylp slfwgfitlg rlisipvsyr mkpatmvfin
      361 vvgvlitfll llifsssvvf lfvgtaslgl flsstfpsml aytedilqyk gcattvlvtg
      421 agigemvlql lvgsiihdrg sysflvcgmi fgclaftfya llvffhrmyp kpsaeldeas
      481 pekaavpedt gqyqr
//
LOCUS       XP_041326414             294 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear ubiquitous casein and cyclin-dependent kinase substrate 1
            isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326414
VERSION     XP_041326414.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470480.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..294
                     /product="nuclear ubiquitous casein and cyclin-dependent
                     kinase substrate 1 isoform X1"
                     /calculated_mol_wt=32579
     CDS             1..294
                     /gene="NUCKS1"
                     /coded_by="XM_041470480.1:299..1183"
                     /db_xref="GeneID:121355228"
ORIGIN      
        1 msrpvrnrkv vdysqfqesd dadddygrds gppskkirss preaknkrrs gknsqedsed
       61 sedkdvktkk ddshsadedf gsedddvgad dgkadsdyes sqkskkgkka kpdknkraas
      121 ksrkrpaeds edekedhknv rqqrqaaska askqremlmd dvgseeeeqe ddeaqfqetd
      181 sgsdedflme ddddsdygss kkknkkvskk skperkekkm pkprlkatvt pspvkgkgka
      241 grptaskatk ektpspkeed eepesppekk ksaspppeks gdegsedeap sged
//
LOCUS       XP_041326415             293 aa            linear   VRT 06-MAY-2021
DEFINITION  nuclear ubiquitous casein and cyclin-dependent kinase substrate 1
            isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326415
VERSION     XP_041326415.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470481.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..293
                     /product="nuclear ubiquitous casein and cyclin-dependent
                     kinase substrate 1 isoform X2"
                     /calculated_mol_wt=32477
     CDS             1..293
                     /gene="NUCKS1"
                     /coded_by="XM_041470481.1:299..1180"
                     /db_xref="GeneID:121355228"
ORIGIN      
        1 msrpvrnrkv vdysqfqesd dadddygrds gppskkirss preaknkrrs gknsqedsed
       61 sedkdvktkk ddshsadedf gsedddvgad dgkadsdyes sqkskkgkka kpdknkraas
      121 ksrkrpaeds edekedhknv rqqrqaaska askqremlmd dvgseeeeqe ddeaqfqens
      181 gsdedflmed dddsdygssk kknkkvskks kperkekkmp kprlkatvtp spvkgkgkag
      241 rptaskatke ktpspkeede epesppekkk saspppeksg degsedeaps ged
//
LOCUS       XP_041326416             450 aa            linear   VRT 06-MAY-2021
DEFINITION  ETS domain-containing protein Elk-4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326416
VERSION     XP_041326416.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470482.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="ETS domain-containing protein Elk-4"
                     /calculated_mol_wt=48442
     Region          17..88
                     /region_name="ETS"
                     /note="erythroblast transformation specific domain;
                     smart00413"
                     /db_xref="CDD:197710"
     CDS             1..450
                     /gene="ELK4"
                     /coded_by="XM_041470482.1:212..1564"
                     /db_xref="GeneID:121355229"
ORIGIN      
        1 mdsaitlwqf llqllqepqn kniicwtsnd gefkllqaee varlwgirkn kpsmnydkls
       61 ralryyyvkn iikkvngkkf vykfvsypei lnmdplvvgr iegdpempgf gevtstpkdv
      121 encgkeksqs caksssrndy ihsglyssft lnslnsssvk lfrsikienp aekltekkpq
      181 dptpsvikfv tmpskkppsa plvsttsava vtstapatpa vssslplgse etlqtletlv
      241 lpklsvpeap paplpnlsas ftptppissv sptlqvpstp pspplssnpd ldidtdiesv
      301 asqqleqaqs lqhqspepke qqdsagleke fanhlsrskk pkglelaptl vitgsdpspl
      361 gilspslpta sltpalfsqt pilltpspll ssihfwstls pvaplsparl qgantlfqfp
      421 svlnshgpft lsgldgpstp gpfspdlqkt
//
LOCUS       XP_041326417            1293 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing
            subunit beta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326417
VERSION     XP_041326417.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470483.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1293
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1293
                     /product="phosphatidylinositol 4-phosphate 3-kinase C2
                     domain-containing subunit beta isoform X1"
                     /calculated_mol_wt=146211
     Region          34..124
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; pfam00794"
                     /db_xref="CDD:395642"
     Region          281..453
                     /region_name="C2A_PI3K_class_II"
                     /note="C2 domain first repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd04012"
                     /db_xref="CDD:175979"
     Region          472..640
                     /region_name="PI3Ka_II"
                     /note="Phosphoinositide 3-kinase (PI3K) class II,
                     accessory domain (PIK domain); PIK domain is conserved in
                     all PI3 and PI4-kinases. Its role is unclear but it has
                     been suggested to be involved in substrate presentation.
                     In general, class II PI3-kinases...; cd00869"
                     /db_xref="CDD:238441"
     Region          646..999
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(716..720,722,740,742,776,788..791,854,858..859,861,
                     871..872)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          1028..1136
                     /region_name="PX_PI3K_C2_beta"
                     /note="The phosphoinositide binding Phox Homology Domain
                     of the Beta Isoform of Class II Phosphoinositide
                     3-Kinases; cd07290"
                     /db_xref="CDD:132823"
     Site            order(1064..1066,1090..1091,1105)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132823"
     Region          1164..1286
                     /region_name="C2B_PI3K_class_II"
                     /note="C2 domain second repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd08381"
                     /db_xref="CDD:176027"
     Site            1214..1224
                     /site_type="active"
                     /note="nuclear localization signal [active]"
                     /db_xref="CDD:176027"
     CDS             1..1293
                     /gene="PIK3C2B"
                     /coded_by="XM_041470483.1:81..3962"
                     /db_xref="GeneID:121355231"
ORIGIN      
        1 mldvlrsssg crdgsgsglv wsavsrsaeq pghgaslkvt vlcdslrepl tftcdcsstv
       61 dlliyqalcy thdelhavdv edfllkicgl eeflqnkhsl gshehiqhcr kfdidirlql
      121 lrrkgvrsdl artasddqsp stlnhhihlq erpikqtisr qalsllfdtf hnevdaflaa
      181 egdvplkaer viqsvmaics alaavesqei taalnqmppc psrmqpkiqk dpnvlakren
      241 reriveslta ailnlvelyc stfnadfqta apgsrelgva qearlltcpl sftvyathri
      301 pitwatsyed fylscslshg gkelcspllt rkahvykylf hliiwdqqic fpvqvnrlpr
      361 etllsvtlfa vpvpppggss dankqrrvpe algwvttplf nfrqvltcgr kllglwpatq
      421 dnsrarssap nfnqpdsvil qidfptsafe vkftsppaae gspryefgsl geeeqrqlre
      481 amqkkslywl tdadrqrlwe krchchaspg alpmllasap swdwgclpdi yallsqwssm
      541 shqdalgllh atfpdqevrr tavqwidsis dtelldylpq lvqalkyecy ldsplvrflm
      601 kraicdlkit hyffwllkdg lkdsqfsiry qyllaallcc cgkglreefd rqcllvstla
      661 rlaqqvrdaa psarqailre gledvaqffk ahgscrlpls psllvkgivp qdcsyfnsna
      721 vplklsfqnv dplgenirvi fkcgddlrqd mltlqmirim nkiwvqegld mrmvifrcfs
      781 tgrgrgmvem ipnaetlrki qvehgvtgsf kdrpladwlq khnpeedeye kavenfiysc
      841 agccvatyvl gicdrhndni mlkttghmfh idfgrflgha qmfgnikrdr apfvftsdma
      901 yvinggdkps srfhdfvdlc cqaynlirkh thlflnllgl mlscgipels dledlkyvyd
      961 alrpqdsdad attyftrlie sslgsvatkl nffihnlaqm kftgsdarpt lsfaprthtl
     1021 ktsgrirdvf lcrhervfnp skgytyvvkv qrdnpgevtf vqrtfeefqe lhnklrllfp
     1081 ssllpsfpsr fvigrsrgea vaerrkeeln gyiwhlihaa pevaecdliy tffhplprde
     1141 kaagtnptpk psdatwarsl gkvggevkls isyknnklfi mvmhirglpp lqdgndpdpy
     1201 vktyllpdpq kttkrktkva rktcnptyne mlvydgiprg dleqrelrls vlseegfwen
     1261 illgevgirl rdldlaqekm gwfalgsrgh gtl
//
LOCUS       XP_041326418            1609 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing
            subunit beta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326418
VERSION     XP_041326418.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470484.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1609
                     /product="phosphatidylinositol 4-phosphate 3-kinase C2
                     domain-containing subunit beta isoform X2"
                     /calculated_mol_wt=180532
     Region          350..440
                     /region_name="PI3K_rbd"
                     /note="PI3-kinase family, ras-binding domain; pfam00794"
                     /db_xref="CDD:395642"
     Region          597..769
                     /region_name="C2A_PI3K_class_II"
                     /note="C2 domain first repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd04012"
                     /db_xref="CDD:175979"
     Region          788..956
                     /region_name="PI3Ka_II"
                     /note="Phosphoinositide 3-kinase (PI3K) class II,
                     accessory domain (PIK domain); PIK domain is conserved in
                     all PI3 and PI4-kinases. Its role is unclear but it has
                     been suggested to be involved in substrate presentation.
                     In general, class II PI3-kinases...; cd00869"
                     /db_xref="CDD:238441"
     Region          962..1315
                     /region_name="Protein Kinases, catalytic domain"
                     /note="The protein kinase superfamily is mainly composed
                     of the catalytic domains of serine/threonine-specific and
                     tyrosine-specific protein kinases. It also includes RIO
                     kinases, which are atypical serine protein kinases,
                     aminoglycoside phosphotransferases; cl21453"
                     /db_xref="CDD:473864"
     Site            order(1032..1036,1038,1056,1058,1092,1104..1107,1170,
                     1174..1175,1177,1187..1188)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270870"
     Region          1344..1452
                     /region_name="PX_PI3K_C2_beta"
                     /note="The phosphoinositide binding Phox Homology Domain
                     of the Beta Isoform of Class II Phosphoinositide
                     3-Kinases; cd07290"
                     /db_xref="CDD:132823"
     Site            order(1380..1382,1406..1407,1421)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:132823"
     Region          1480..1602
                     /region_name="C2B_PI3K_class_II"
                     /note="C2 domain second repeat present in class II
                     phosphatidylinositol 3-kinases (PI3Ks); cd08381"
                     /db_xref="CDD:176027"
     Site            1530..1540
                     /site_type="active"
                     /note="nuclear localization signal [active]"
                     /db_xref="CDD:176027"
     CDS             1..1609
                     /gene="PIK3C2B"
                     /coded_by="XM_041470484.1:41..4870"
                     /db_xref="GeneID:121355231"
ORIGIN      
        1 mscrrgpgep wpalesvgls rkelalaeal qmeydalsrl rqdkeesrar keqlqersli
       61 swddpvdrna ikaarglsgs dpalgravpa vpegpqappg pspprpepqp wkgplsgdyl
      121 lifegsqrdf lgeplngsep hdgggspkkl sppplpprhp lwgcpegsqr sgkasplspk
      181 gqaqprdinm fsvaqdkllg rrisqedpyg vdaitclnlk styecevlre gsrgwkegrs
      241 ilekessgkp varsktmppq vpprtygara gtrknlaanr nrrisvepvg lprgelelgw
      301 dgagnsetgi qtlshpcsrr lrsssgcrdg sgsglvwsav srsaeqpghg aslkvtvlcd
      361 slrepltftc dcsstvdlli yqalcythde lhavdvedfl lkicgleefl qnkhslgshe
      421 hiqhcrkfdi dirlqllrrk gvrsdlarta sddqspstln hhihlqerpi kqtisrqals
      481 llfdtfhnev daflaaegdv plkaerviqs vmaicsalaa vesqeitaal nqmppcpsrm
      541 qpkiqkdpnv lakrenreri vesltaailn lvelycstfn adfqtaapgs relgvaqear
      601 lltcplsftv yathripitw atsyedfyls cslshggkel csplltrkah vykylfhlii
      661 wdqqicfpvq vnrlpretll svtlfavpvp ppggssdank qrrvpealgw vttplfnfrq
      721 vltcgrkllg lwpatqdnsr arssapnfnq pdsvilqidf ptsafevkft sppaaegspr
      781 yefgslgeee qrqlreamqk kslywltdad rqrlwekrch chaspgalpm llasapswdw
      841 gclpdiyall sqwssmshqd algllhatfp dqevrrtavq widsisdtel ldylpqlvqa
      901 lkyecyldsp lvrflmkrai cdlkithyff wllkdglkds qfsiryqyll aallcccgkg
      961 lreefdrqcl lvstlarlaq qvrdaapsar qailregled vaqffkahgs crlplspsll
     1021 vkgivpqdcs yfnsnavplk lsfqnvdplg enirvifkcg ddlrqdmltl qmirimnkiw
     1081 vqegldmrmv ifrcfstgrg rgmvemipna etlrkiqveh gvtgsfkdrp ladwlqkhnp
     1141 eedeyekave nfiyscagcc vatyvlgicd rhndnimlkt tghmfhidfg rflghaqmfg
     1201 nikrdrapfv ftsdmayvin ggdkpssrfh dfvdlccqay nlirkhthlf lnllglmlsc
     1261 gipelsdled lkyvydalrp qdsdadatty ftrliesslg svatklnffi hnlaqmkftg
     1321 sdarptlsfa prthtlktsg rirdvflcrh ervfnpskgy tyvvkvqrdn pgevtfvqrt
     1381 feefqelhnk lrllfpssll psfpsrfvig rsrgeavaer rkeelngyiw hlihaapeva
     1441 ecdliytffh plprdekaag tnptpkpsda twarslgkvg gevklsisyk nnklfimvmh
     1501 irglpplqdg ndpdpyvkty llpdpqkttk rktkvarktc nptynemlvy dgiprgdleq
     1561 relrlsvlse egfwenillg evgirlrdld laqekmgwfa lgsrghgtl
//
LOCUS       XP_041326419            1220 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326419
VERSION     XP_041326419.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470485.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1220
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X1"
                     /calculated_mol_wt=135010
     Region          122..245
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(136,138..139,146,148,159,222)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <330..532
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          651..>786
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1220
                     /gene="PLEKHA6"
                     /coded_by="XM_041470485.1:65..3727"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 mtvsmglegk ssapagcgra tgtaggaagg gdarwhrhne rrntflhpvt gqvpedtsrl
       61 dlpkhssdms skagskrpat vpseppnham vaevpperpg graprssrkg iafgkrsnsm
      121 krnpnaavtk sgwlykqass gvkqwnkrwf vlvdrclfyy kdekeenilg sipllsfrva
      181 avqpsdnisr khtfkvtvcw veelpagngq slspqaehag irtyffsaen teeqeswiqa
      241 mgeaarvqip psqrhekpds enippskhhh hhhcnaahre hpkaepdakt rgegdgrgse
      301 kmerkpsera dgkkeplaka nglggqepps epgspypegp rapasaerpa qpngwpypsp
      361 srpsstafpp agdgesgaqr rgvtprshpe kvaqrkssmt qlqqwvnsrr ataapeelrs
      421 psrfypvsrr vpdyyspysp qypeeyqyyp pgvrpdsics mpafdrvspp waledkrhsf
      481 rnggpfhpaf grqdvplwlp aparppsyld evdaasgslr rmslqprsrs vprspsqgsy
      541 gharvyspvr spsarferlp prgdeiyadp atfvmrrsis spkydylgdr rpvpagvypy
      601 pfpasptihd kmmsesetli tmvnrmvets spraqlymqv tpfpepyrdt lhpykiseqd
      661 tdkllgklce qnkvlreqer lvqqlraeke slesalmgth qelemfgsqp aypekllhkk
      721 eslqnqlini rvelsqasta lanstaeyes lesevstlhd dlweqlnldi qnemlnrqiq
      781 reiwriqdvm eglrknnpsr gtdtakhrva lgpsgtyssn spasplssas ltsplspfsl
      841 isgsqgsptk pgpgeepgpp rpplpksyvp leappavppl psesrlwpyp aspswhqgea
      901 krgqpkpgle pskkepprps ppgpapeglp qsrpehdgdk qaalnkvgiv pprtkspaee
      961 eavprrngla nglgsrerpk savfatetkv kmsveeqidr mkrhqsgsmk ekrrslqlpg
     1021 pqpdppgtkt pssykvvrrh rsihevdisd leaalrsdep gkvyetpqee iarlrkmele
     1081 pqhydvdink elstpdkvli peryvelepe splspeemke kqkkverikt liaksslqnv
     1141 iplgegevdt pqdpevqlqe qekrieisca laaeasrrgr mlsaqcatps pptspasptp
     1201 ptnplssepp radsshlmrv
//
LOCUS       XP_041326421            1200 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326421
VERSION     XP_041326421.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470487.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1200
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X2"
                     /calculated_mol_wt=132914
     Region          122..225
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(136,138..139,146,148,159,202)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <310..512
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          631..>766
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1200
                     /gene="PLEKHA6"
                     /coded_by="XM_041470487.1:65..3667"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 mtvsmglegk ssapagcgra tgtaggaagg gdarwhrhne rrntflhpvt gqvpedtsrl
       61 dlpkhssdms skagskrpat vpseppnham vaevpperpg graprssrkg iafgkrsnsm
      121 krnpnaavtk sgwlykqass gvkqwnkrwf vlvdrclfyy kdekeenilg sipllsfrva
      181 avqpsdnisr khtfkaehag irtyffsaen teeqeswiqa mgeaarvqip psqrhekpds
      241 enippskhhh hhhcnaahre hpkaepdakt rgegdgrgse kmerkpsera dgkkeplaka
      301 nglggqepps epgspypegp rapasaerpa qpngwpypsp srpsstafpp agdgesgaqr
      361 rgvtprshpe kvaqrkssmt qlqqwvnsrr ataapeelrs psrfypvsrr vpdyyspysp
      421 qypeeyqyyp pgvrpdsics mpafdrvspp waledkrhsf rnggpfhpaf grqdvplwlp
      481 aparppsyld evdaasgslr rmslqprsrs vprspsqgsy gharvyspvr spsarferlp
      541 prgdeiyadp atfvmrrsis spkydylgdr rpvpagvypy pfpasptihd kmmsesetli
      601 tmvnrmvets spraqlymqv tpfpepyrdt lhpykiseqd tdkllgklce qnkvlreqer
      661 lvqqlraeke slesalmgth qelemfgsqp aypekllhkk eslqnqlini rvelsqasta
      721 lanstaeyes lesevstlhd dlweqlnldi qnemlnrqiq reiwriqdvm eglrknnpsr
      781 gtdtakhrva lgpsgtyssn spasplssas ltsplspfsl isgsqgsptk pgpgeepgpp
      841 rpplpksyvp leappavppl psesrlwpyp aspswhqgea krgqpkpgle pskkepprps
      901 ppgpapeglp qsrpehdgdk qaalnkvgiv pprtkspaee eavprrngla nglgsrerpk
      961 savfatetkv kmsveeqidr mkrhqsgsmk ekrrslqlpg pqpdppgtkt pssykvvrrh
     1021 rsihevdisd leaalrsdep gkvyetpqee iarlrkmele pqhydvdink elstpdkvli
     1081 peryvelepe splspeemke kqkkverikt liaksslqnv iplgegevdt pqdpevqlqe
     1141 qekrieisca laaeasrrgr mlsaqcatps pptspasptp ptnplssepp radsshlmrv
//
LOCUS       XP_041326422            1200 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326422
VERSION     XP_041326422.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470488.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1200
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X3"
                     /calculated_mol_wt=132872
     Region          122..245
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(136,138..139,146,148,159,222)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <330..532
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          651..>786
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1200
                     /gene="PLEKHA6"
                     /coded_by="XM_041470488.1:65..3667"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 mtvsmglegk ssapagcgra tgtaggaagg gdarwhrhne rrntflhpvt gqvpedtsrl
       61 dlpkhssdms skagskrpat vpseppnham vaevpperpg graprssrkg iafgkrsnsm
      121 krnpnaavtk sgwlykqass gvkqwnkrwf vlvdrclfyy kdekeenilg sipllsfrva
      181 avqpsdnisr khtfkvtvcw veelpagngq slspqaehag irtyffsaen teeqeswiqa
      241 mgeaarvqip psqrhekpds enippskhhh hhhcnaahre hpkaepdakt rgegdgrgse
      301 kmerkpsera dgkkeplaka nglggqepps epgspypegp rapasaerpa qpngwpypsp
      361 srpsstafpp agdgesgaqr rgvtprshpe kvaqrkssmt qlqqwvnsrr ataapeelrs
      421 psrfypvsrr vpdyyspysp qypeeyqyyp pgvrpdsics mpafdrvspp waledkrhsf
      481 rnggpfhpaf grqdvplwlp aparppsyld evdaasgslr rmslqprsrs vprspsqgsy
      541 gharvyspvr spsarferlp prgdeiyadp atfvmrrsis spkydylgdr rpvpagvypy
      601 pfpasptihd kmmsesetli tmvnrmvets spraqlymqv tpfpepyrdt lhpykiseqd
      661 tdkllgklce qnkvlreqer lvqqlraeke slesalmgth qelemfgsqp aypekllhkk
      721 eslqnqlini rvelsqasta lanstaeyes lesevstlhd dlweqlnldi qnemlnrqiq
      781 reiwriqdvm eglrknnpsr gtdtakhrva lgpsgtyssn spasplssas ltsplspfsl
      841 isgsqgsptk pgpgeepgpp rpplpksyvp leappavppl psesrlwpyp aspswhqgea
      901 krgqpkpgle pskkepprps ppgpapeglp qsrpehdgdk qaalnkvgiv pprtkspaee
      961 eavprrngla nglgsrerpk savfatetkv kmsveeqidr mkrhqsgsmk ekrrslqlpg
     1021 pqpdppgtkt pssykvvrrh rsihevdisd leaalrsdep gkvyetpqee iarlrkmele
     1081 pqhydvdink elstpdkvli peryvelepe splspeemke kqkkverikt liaksslqnv
     1141 iplgegevdt pqdpevqlqe qekrieisca laaeasrrgr mlsaqalaaa gaikfhgatf
//
LOCUS       XP_041326423            1193 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326423
VERSION     XP_041326423.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470489.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1193
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X4"
                     /calculated_mol_wt=131894
     Region          122..245
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(136,138..139,146,148,159,222)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <330..532
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          624..>759
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1193
                     /gene="PLEKHA6"
                     /coded_by="XM_041470489.1:65..3646"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 mtvsmglegk ssapagcgra tgtaggaagg gdarwhrhne rrntflhpvt gqvpedtsrl
       61 dlpkhssdms skagskrpat vpseppnham vaevpperpg graprssrkg iafgkrsnsm
      121 krnpnaavtk sgwlykqass gvkqwnkrwf vlvdrclfyy kdekeenilg sipllsfrva
      181 avqpsdnisr khtfkvtvcw veelpagngq slspqaehag irtyffsaen teeqeswiqa
      241 mgeaarvqip psqrhekpds enippskhhh hhhcnaahre hpkaepdakt rgegdgrgse
      301 kmerkpsera dgkkeplaka nglggqepps epgspypegp rapasaerpa qpngwpypsp
      361 srpsstafpp agdgesgaqr rgvtprshpe kvaqrkssmt qlqqwvnsrr ataapeelrs
      421 psrfypvsrr vpdyyspysp qypeeyqyyp pgvrpdsics mpafdrvspp waledkrhsf
      481 rnggpfhpaf grqdvplwlp aparppsyld evdaasgslr rmslqprsrs vprspsqgsy
      541 gharvyspvr spsarferlp prgdeiyadp atfvmrrsis spkydylgdr rpvpagvypy
      601 pfpasptihd kmvtpfpepy rdtlhpykis eqdtdkllgk lceqnkvlre qerlvqqlra
      661 ekeslesalm gthqelemfg sqpaypekll hkkeslqnql inirvelsqa stalanstae
      721 yeslesevst lhddlweqln ldiqnemlnr qiqreiwriq dvmeglrknn psrgtdtakh
      781 rvalgpsgty ssnspaspls sasltsplsp fslisgsqgs ptkpgpgeep gpprpplpks
      841 yvpleappav pplpsesrlw pypaspswhq geakrgqpkp glepskkepp rpsppgpape
      901 glpqsrpehd gdkqaalnkv givpprtksp aeeeavprrn glanglgsre rpksavfate
      961 tkvkmsveeq idrmkrhqsg smkekrrslq lpgpqpdppg tktpssykvv rrhrsihevd
     1021 isdleaalrs depgkvyetp qeeiarlrkm elepqhydvd inkelstpdk vliperyvel
     1081 epesplspee mkekqkkver iktliakssl qnviplgege vdtpqdpevq lqeqekriei
     1141 scalaaeasr rgrmlsaqca tpspptspas ptpptnplss eppradsshl mrv
//
LOCUS       XP_041326424            1173 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326424
VERSION     XP_041326424.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470490.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1173
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X5"
                     /calculated_mol_wt=129756
     Region          122..245
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(136,138..139,146,148,159,222)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <330..532
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          624..>759
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1173
                     /gene="PLEKHA6"
                     /coded_by="XM_041470490.1:65..3586"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 mtvsmglegk ssapagcgra tgtaggaagg gdarwhrhne rrntflhpvt gqvpedtsrl
       61 dlpkhssdms skagskrpat vpseppnham vaevpperpg graprssrkg iafgkrsnsm
      121 krnpnaavtk sgwlykqass gvkqwnkrwf vlvdrclfyy kdekeenilg sipllsfrva
      181 avqpsdnisr khtfkvtvcw veelpagngq slspqaehag irtyffsaen teeqeswiqa
      241 mgeaarvqip psqrhekpds enippskhhh hhhcnaahre hpkaepdakt rgegdgrgse
      301 kmerkpsera dgkkeplaka nglggqepps epgspypegp rapasaerpa qpngwpypsp
      361 srpsstafpp agdgesgaqr rgvtprshpe kvaqrkssmt qlqqwvnsrr ataapeelrs
      421 psrfypvsrr vpdyyspysp qypeeyqyyp pgvrpdsics mpafdrvspp waledkrhsf
      481 rnggpfhpaf grqdvplwlp aparppsyld evdaasgslr rmslqprsrs vprspsqgsy
      541 gharvyspvr spsarferlp prgdeiyadp atfvmrrsis spkydylgdr rpvpagvypy
      601 pfpasptihd kmvtpfpepy rdtlhpykis eqdtdkllgk lceqnkvlre qerlvqqlra
      661 ekeslesalm gthqelemfg sqpaypekll hkkeslqnql inirvelsqa stalanstae
      721 yeslesevst lhddlweqln ldiqnemlnr qiqreiwriq dvmeglrknn psrgtdtakh
      781 rvalgpsgty ssnspaspls sasltsplsp fslisgsqgs ptkpgpgeep gpprpplpks
      841 yvpleappav pplpsesrlw pypaspswhq geakrgqpkp glepskkepp rpsppgpape
      901 glpqsrpehd gdkqaalnkv givpprtksp aeeeavprrn glanglgsre rpksavfate
      961 tkvkmsveeq idrmkrhqsg smkekrrslq lpgpqpdppg tktpssykvv rrhrsihevd
     1021 isdleaalrs depgkvyetp qeeiarlrkm elepqhydvd inkelstpdk vliperyvel
     1081 epesplspee mkekqkkver iktliakssl qnviplgege vdtpqdpevq lqeqekriei
     1141 scalaaeasr rgrmlsaqal aaagaikfhg atf
//
LOCUS       XP_041326425            1171 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326425
VERSION     XP_041326425.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470491.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1171
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X6"
                     /calculated_mol_wt=129678
     Region          122..245
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(136,138..139,146,148,159,222)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <330..532
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          651..>786
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1171
                     /gene="PLEKHA6"
                     /coded_by="XM_041470491.1:65..3580"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 mtvsmglegk ssapagcgra tgtaggaagg gdarwhrhne rrntflhpvt gqvpedtsrl
       61 dlpkhssdms skagskrpat vpseppnham vaevpperpg graprssrkg iafgkrsnsm
      121 krnpnaavtk sgwlykqass gvkqwnkrwf vlvdrclfyy kdekeenilg sipllsfrva
      181 avqpsdnisr khtfkvtvcw veelpagngq slspqaehag irtyffsaen teeqeswiqa
      241 mgeaarvqip psqrhekpds enippskhhh hhhcnaahre hpkaepdakt rgegdgrgse
      301 kmerkpsera dgkkeplaka nglggqepps epgspypegp rapasaerpa qpngwpypsp
      361 srpsstafpp agdgesgaqr rgvtprshpe kvaqrkssmt qlqqwvnsrr ataapeelrs
      421 psrfypvsrr vpdyyspysp qypeeyqyyp pgvrpdsics mpafdrvspp waledkrhsf
      481 rnggpfhpaf grqdvplwlp aparppsyld evdaasgslr rmslqprsrs vprspsqgsy
      541 gharvyspvr spsarferlp prgdeiyadp atfvmrrsis spkydylgdr rpvpagvypy
      601 pfpasptihd kmmsesetli tmvnrmvets spraqlymqv tpfpepyrdt lhpykiseqd
      661 tdkllgklce qnkvlreqer lvqqlraeke slesalmgth qelemfgsqp aypekllhkk
      721 eslqnqlini rvelsqasta lanstaeyes lesevstlhd dlweqlnldi qnemlnrqiq
      781 reiwriqdvm eglrknnpsr gtdtakhrva lgpsgtyssn spasplssas ltsplspfsl
      841 isgsqgsptk pgpgepkpgl epskkepprp sppgpapegl pqsrpehdgd kqaalnkvgi
      901 vpprtkspae eeavprrngl anglgsrerp ksavfatetk vkmsveeqid rmkrhqsgsm
      961 kekrrslqlp gpqpdppgtk tpssykvvrr hrsihevdis dleaalrsde pgkvyetpqe
     1021 eiarlrkmel epqhydvdin kelstpdkvl iperyvelep esplspeemk ekqkkverik
     1081 tliaksslqn viplgegevd tpqdpevqlq eqekrieisc alaaeasrrg rmlsaqcatp
     1141 spptspaspt pptnplssep pradsshlmr v
//
LOCUS       XP_041326426            1152 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326426
VERSION     XP_041326426.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470492.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1152
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X7"
                     /calculated_mol_wt=127972
     Region          54..177
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(68,70..71,78,80,91,154)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <262..464
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          583..>718
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1152
                     /gene="PLEKHA6"
                     /coded_by="XM_041470492.1:140..3598"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 msskagskrp atvpseppnh amvaevpper pggraprssr kgiafgkrsn smkrnpnaav
       61 tksgwlykqa ssgvkqwnkr wfvlvdrclf yykdekeeni lgsipllsfr vaavqpsdni
      121 srkhtfkvtv cwveelpagn gqslspqaeh agirtyffsa enteeqeswi qamgeaarvq
      181 ippsqrhekp dsenippskh hhhhhcnaah rehpkaepda ktrgegdgrg sekmerkpse
      241 radgkkepla kanglggqep psepgspype gprapasaer paqpngwpyp spsrpsstaf
      301 ppagdgesga qrrgvtprsh pekvaqrkss mtqlqqwvns rrataapeel rspsrfypvs
      361 rrvpdyyspy spqypeeyqy yppgvrpdsi csmpafdrvs ppwaledkrh sfrnggpfhp
      421 afgrqdvplw lpaparppsy ldevdaasgs lrrmslqprs rsvprspsqg sygharvysp
      481 vrspsarfer lpprgdeiya dpatfvmrrs isspkydylg drrpvpagvy pypfpaspti
      541 hdkmmseset litmvnrmve tsspraqlym qvtpfpepyr dtlhpykise qdtdkllgkl
      601 ceqnkvlreq erlvqqlrae keslesalmg thqelemfgs qpaypekllh kkeslqnqli
      661 nirvelsqas talanstaey eslesevstl hddlweqlnl diqnemlnrq iqreiwriqd
      721 vmeglrknnp srgtdtakhr valgpsgtys snspasplss asltsplspf slisgsqgsp
      781 tkpgpgeepg pprpplpksy vpleappavp plpsesrlwp ypaspswhqg eakrgqpkpg
      841 lepskkeppr psppgpapeg lpqsrpehdg dkqaalnkvg ivpprtkspa eeeavprrng
      901 langlgsrer pksavfatet kvkmsveeqi drmkrhqsgs mkekrrslql pgpqpdppgt
      961 ktpssykvvr rhrsihevdi sdleaalrsd epgkvyetpq eeiarlrkme lepqhydvdi
     1021 nkelstpdkv liperyvele pesplspeem kekqkkveri ktliaksslq nviplgegev
     1081 dtpqdpevql qeqekrieis calaaeasrr grmlsaqcat pspptspasp tpptnplsse
     1141 ppradsshlm rv
//
LOCUS       XP_041326427            1151 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family A member 6 isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326427
VERSION     XP_041326427.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470493.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1151
                     /product="pleckstrin homology domain-containing family A
                     member 6 isoform X8"
                     /calculated_mol_wt=127582
     Region          122..225
                     /region_name="PH_PEPP1_2_3"
                     /note="Phosphoinositol 3-phosphate binding proteins 1, 2,
                     and 3 pleckstrin homology (PH) domain; cd13248"
                     /db_xref="CDD:270068"
     Site            order(136,138..139,146,148,159,202)
                     /site_type="other"
                     /note="phosphoinositide binding site [chemical binding]"
                     /db_xref="CDD:270068"
     Region          <310..512
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          631..>766
                     /region_name="YhaN"
                     /note="Uncharacterized conserved protein YhaN, contains
                     AAA domain [Function unknown]; COG4717"
                     /db_xref="CDD:443752"
     CDS             1..1151
                     /gene="PLEKHA6"
                     /coded_by="XM_041470493.1:65..3520"
                     /db_xref="GeneID:121355232"
ORIGIN      
        1 mtvsmglegk ssapagcgra tgtaggaagg gdarwhrhne rrntflhpvt gqvpedtsrl
       61 dlpkhssdms skagskrpat vpseppnham vaevpperpg graprssrkg iafgkrsnsm
      121 krnpnaavtk sgwlykqass gvkqwnkrwf vlvdrclfyy kdekeenilg sipllsfrva
      181 avqpsdnisr khtfkaehag irtyffsaen teeqeswiqa mgeaarvqip psqrhekpds
      241 enippskhhh hhhcnaahre hpkaepdakt rgegdgrgse kmerkpsera dgkkeplaka
      301 nglggqepps epgspypegp rapasaerpa qpngwpypsp srpsstafpp agdgesgaqr
      361 rgvtprshpe kvaqrkssmt qlqqwvnsrr ataapeelrs psrfypvsrr vpdyyspysp
      421 qypeeyqyyp pgvrpdsics mpafdrvspp waledkrhsf rnggpfhpaf grqdvplwlp
      481 aparppsyld evdaasgslr rmslqprsrs vprspsqgsy gharvyspvr spsarferlp
      541 prgdeiyadp atfvmrrsis spkydylgdr rpvpagvypy pfpasptihd kmmsesetli
      601 tmvnrmvets spraqlymqv tpfpepyrdt lhpykiseqd tdkllgklce qnkvlreqer
      661 lvqqlraeke slesalmgth qelemfgsqp aypekllhkk eslqnqlini rvelsqasta
      721 lanstaeyes lesevstlhd dlweqlnldi qnemlnrqiq reiwriqdvm eglrknnpsr
      781 gtdtakhrva lgpsgtyssn spasplssas ltsplspfsl isgsqgsptk pgpgepkpgl
      841 epskkepprp sppgpapegl pqsrpehdgd kqaalnkvgi vpprtkspae eeavprrngl
      901 anglgsrerp ksavfatetk vkmsveeqid rmkrhqsgsm kekrrslqlp gpqpdppgtk
      961 tpssykvvrr hrsihevdis dleaalrsde pgkvyetpqe eiarlrkmel epqhydvdin
     1021 kelstpdkvl iperyvelep esplspeemk ekqkkverik tliaksslqn viplgegevd
     1081 tpqdpevqlq eqekrieisc alaaeasrrg rmlsaqcatp spptspaspt pptnplssep
     1141 pradsshlmr v
//
LOCUS       XP_041326428            1079 aa            linear   VRT 06-MAY-2021
DEFINITION  neurofascin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326428
VERSION     XP_041326428.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470494.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1079
                     /product="neurofascin isoform X1"
                     /calculated_mol_wt=121141
     Region          36..130
                     /region_name="IgI_hNeurofascin_like"
                     /note="Immunoglobulin (Ig)-like domain of human
                     neurofascin (NF); member of the I-set of Ig superfamily
                     (IgSF) domains; cd05875"
                     /db_xref="CDD:409459"
     Region          36..40
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409459"
     Region          45..49
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409459"
     Region          54..61
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409459"
     Region          67..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409459"
     Region          75..77
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409459"
     Region          84..87
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409459"
     Region          92..96
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409459"
     Region          109..117
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409459"
     Region          120..130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409459"
     Region          139..229
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          153..157
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          167..171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          205..210
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          264..346
                     /region_name="Ig3_L1-CAM_like"
                     /note="Third immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains;
                     cd05731"
                     /db_xref="CDD:409394"
     Region          276..280
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409394"
     Region          289..293
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409394"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409394"
     Region          325..330
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409394"
     Region          338..341
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409394"
     Region          350..438
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          366..370
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          379..383
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          403..407
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          417..422
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          430..433
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          446..530
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          460..464
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          473..477
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          496..500
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          510..515
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..526
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          535..621
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          551..555
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          566..570
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          587..591
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          601..606
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          614..617
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <637..>841
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          637..727
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(637,703,718)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(719..720,722..723)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          834..919
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(834,901,916)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          967..1055
                     /region_name="Bravo_FIGEY"
                     /note="Bravo-like intracellular region; pfam13882"
                     /db_xref="CDD:464016"
     CDS             1..1079
                     /gene="NFASC"
                     /coded_by="XM_041470494.1:272..3511"
                     /db_xref="GeneID:121355233"
ORIGIN      
        1 milrraqvtc ariafalclq hlisaievpl dlpqpptitk qsikdyivdp rdnifiecea
       61 kgnpvpifsw trngkffnva kdpkvsmrrr sgtlvidfhs ggrpddyege yqcfarndyg
      121 talsskihlq vsksplwpke kvdvievdeg aplslqcnpp pglpepvifw msssmepipq
      181 dkrvsqghng dlyfsnvlaq daltdyscna rfhfthtiqq knpytlkvkt kkshnetslg
      241 nspamyrarg isettpsfmy pygtsssqmv lrgvdlllec iasgvpapdi mwykkggelp
      301 vgktklenfn kalrisnvse edsgeyfcla snkmgsirht isvrvkaapy wldepenlil
      361 apgedgrlvc rangnpkpsi qwlvngepie ssppnpsrev agdtivfrdt qigssavyqc
      421 nasnehgyll anafvsvldv pprilgprnq lirviqnnrt rldcpffgsp iptlrwfkng
      481 qgntldggny kahengslem fmarkedqgi ytcvatnilg kaeaqvrlev kdptrivrgp
      541 edqvvkrgtm prlhcrvkhd ptlrlmvtwl kddaplylgn rmkkeedglt iygvtekdqg
      601 dytcvastel dkdlakaylt vlaipanrlk dlpkarpdrp rdleltdlae rsvrltwipg
      661 ddnnspitdy ivqfeedrfq pgvwhdhsry pgsvnsavln lspyvnyqfr viavndvgss
      721 vpsepseryq tngarpeinp tgvqgagtqk nnmeitwtpl natqaygpnl ryivrwrrrd
      781 prgswynetv rsarhvvwnt pifvpyeikv qaendfgrap epdtyigysg edlpsspryl
      841 rirqpnleii nlewdhpehp ngiitgytlq yqpfngsrmg rtvvenlspn qtrftlqrsd
      901 pisryrfklr artqvgeget ltedspalld eaytknqvdi atqgwfiglm caiallvlil
      961 livcfikrsr ggkypvrdnk dehlnpedkn vedgsfdyrs lesdednkpl pnsqtsldgt
     1021 ikqqesddsl vdygeggegq fnedgsfigq ytvkkdkeet egnesseats pvnaiysla
//
LOCUS       XP_041326429            1075 aa            linear   VRT 06-MAY-2021
DEFINITION  neurofascin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326429
VERSION     XP_041326429.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470495.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1075
                     /product="neurofascin isoform X2"
                     /calculated_mol_wt=120655
     Region          36..130
                     /region_name="IgI_hNeurofascin_like"
                     /note="Immunoglobulin (Ig)-like domain of human
                     neurofascin (NF); member of the I-set of Ig superfamily
                     (IgSF) domains; cd05875"
                     /db_xref="CDD:409459"
     Region          36..40
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409459"
     Region          45..49
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409459"
     Region          54..61
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409459"
     Region          67..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409459"
     Region          75..77
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409459"
     Region          84..87
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409459"
     Region          92..96
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409459"
     Region          109..117
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409459"
     Region          120..130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409459"
     Region          139..229
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          153..157
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          167..171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          205..210
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          264..346
                     /region_name="Ig3_L1-CAM_like"
                     /note="Third immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains;
                     cd05731"
                     /db_xref="CDD:409394"
     Region          276..280
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409394"
     Region          289..293
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409394"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409394"
     Region          325..330
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409394"
     Region          338..341
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409394"
     Region          350..438
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          366..370
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          379..383
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          403..407
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          417..422
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          430..433
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          446..530
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          460..464
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          473..477
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          496..500
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          510..515
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..526
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          535..621
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          551..555
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          566..570
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          587..591
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          601..606
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          614..617
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <637..>841
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          637..727
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(637,703,718)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(719..720,722..723)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          834..919
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(834,901,916)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          967..1051
                     /region_name="Bravo_FIGEY"
                     /note="Bravo-like intracellular region; pfam13882"
                     /db_xref="CDD:464016"
     CDS             1..1075
                     /gene="NFASC"
                     /coded_by="XM_041470495.1:272..3499"
                     /db_xref="GeneID:121355233"
ORIGIN      
        1 milrraqvtc ariafalclq hlisaievpl dlpqpptitk qsikdyivdp rdnifiecea
       61 kgnpvpifsw trngkffnva kdpkvsmrrr sgtlvidfhs ggrpddyege yqcfarndyg
      121 talsskihlq vsksplwpke kvdvievdeg aplslqcnpp pglpepvifw msssmepipq
      181 dkrvsqghng dlyfsnvlaq daltdyscna rfhfthtiqq knpytlkvkt kkshnetslg
      241 nspamyrarg isettpsfmy pygtsssqmv lrgvdlllec iasgvpapdi mwykkggelp
      301 vgktklenfn kalrisnvse edsgeyfcla snkmgsirht isvrvkaapy wldepenlil
      361 apgedgrlvc rangnpkpsi qwlvngepie ssppnpsrev agdtivfrdt qigssavyqc
      421 nasnehgyll anafvsvldv pprilgprnq lirviqnnrt rldcpffgsp iptlrwfkng
      481 qgntldggny kahengslem fmarkedqgi ytcvatnilg kaeaqvrlev kdptrivrgp
      541 edqvvkrgtm prlhcrvkhd ptlrlmvtwl kddaplylgn rmkkeedglt iygvtekdqg
      601 dytcvastel dkdlakaylt vlaipanrlk dlpkarpdrp rdleltdlae rsvrltwipg
      661 ddnnspitdy ivqfeedrfq pgvwhdhsry pgsvnsavln lspyvnyqfr viavndvgss
      721 vpsepseryq tngarpeinp tgvqgagtqk nnmeitwtpl natqaygpnl ryivrwrrrd
      781 prgswynetv rsarhvvwnt pifvpyeikv qaendfgrap epdtyigysg edlpsspryl
      841 rirqpnleii nlewdhpehp ngiitgytlq yqpfngsrmg rtvvenlspn qtrftlqrsd
      901 pisryrfklr artqvgeget ltedspalld eaytknqvdi atqgwfiglm caiallvlil
      961 livcfikrsr ggkypvrdnk dehlnpedkn vedgsfdysd ednkplpnsq tsldgtikqq
     1021 esddslvdyg eggegqfned gsfigqytvk kdkeetegne sseatspvna iysla
//
LOCUS       XP_041326431            1063 aa            linear   VRT 06-MAY-2021
DEFINITION  neurofascin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326431
VERSION     XP_041326431.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470497.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1063
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1063
                     /product="neurofascin isoform X3"
                     /calculated_mol_wt=119338
     Region          36..130
                     /region_name="IgI_hNeurofascin_like"
                     /note="Immunoglobulin (Ig)-like domain of human
                     neurofascin (NF); member of the I-set of Ig superfamily
                     (IgSF) domains; cd05875"
                     /db_xref="CDD:409459"
     Region          36..40
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409459"
     Region          45..49
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409459"
     Region          54..61
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409459"
     Region          67..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409459"
     Region          75..77
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409459"
     Region          84..87
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409459"
     Region          92..96
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409459"
     Region          109..117
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409459"
     Region          120..130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409459"
     Region          139..229
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          153..157
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          167..171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          205..210
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          264..346
                     /region_name="Ig3_L1-CAM_like"
                     /note="Third immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains;
                     cd05731"
                     /db_xref="CDD:409394"
     Region          276..280
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409394"
     Region          289..293
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409394"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409394"
     Region          325..330
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409394"
     Region          338..341
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409394"
     Region          350..438
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          366..370
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          379..383
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          403..407
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          417..422
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          430..433
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          446..530
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          460..464
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          473..477
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          496..500
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          510..515
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..526
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          535..621
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          551..555
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          566..570
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          587..591
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          601..606
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          614..617
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <625..>829
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          625..715
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(625,691,706)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(707..708,710..711)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          822..907
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(822,889,904)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          955..1039
                     /region_name="Bravo_FIGEY"
                     /note="Bravo-like intracellular region; pfam13882"
                     /db_xref="CDD:464016"
     CDS             1..1063
                     /gene="NFASC"
                     /coded_by="XM_041470497.1:272..3463"
                     /db_xref="GeneID:121355233"
ORIGIN      
        1 milrraqvtc ariafalclq hlisaievpl dlpqpptitk qsikdyivdp rdnifiecea
       61 kgnpvpifsw trngkffnva kdpkvsmrrr sgtlvidfhs ggrpddyege yqcfarndyg
      121 talsskihlq vsksplwpke kvdvievdeg aplslqcnpp pglpepvifw msssmepipq
      181 dkrvsqghng dlyfsnvlaq daltdyscna rfhfthtiqq knpytlkvkt kkshnetslg
      241 nspamyrarg isettpsfmy pygtsssqmv lrgvdlllec iasgvpapdi mwykkggelp
      301 vgktklenfn kalrisnvse edsgeyfcla snkmgsirht isvrvkaapy wldepenlil
      361 apgedgrlvc rangnpkpsi qwlvngepie ssppnpsrev agdtivfrdt qigssavyqc
      421 nasnehgyll anafvsvldv pprilgprnq lirviqnnrt rldcpffgsp iptlrwfkng
      481 qgntldggny kahengslem fmarkedqgi ytcvatnilg kaeaqvrlev kdptrivrgp
      541 edqvvkrgtm prlhcrvkhd ptlrlmvtwl kddaplylgn rmkkeedglt iygvtekdqg
      601 dytcvastel dkdlakaylt vlarpdrprd leltdlaers vrltwipgdd nnspitdyiv
      661 qfeedrfqpg vwhdhsrypg svnsavlnls pyvnyqfrvi avndvgssvp sepseryqtn
      721 garpeinptg vqgagtqknn meitwtplna tqaygpnlry ivrwrrrdpr gswynetvrs
      781 arhvvwntpi fvpyeikvqa endfgrapep dtyigysged lpssprylri rqpnleiinl
      841 ewdhpehpng iitgytlqyq pfngsrmgrt vvenlspnqt rftlqrsdpi sryrfklrar
      901 tqvgegetlt edspalldea ytknqvdiat qgwfiglmca iallvlilli vcfikrsrgg
      961 kypvrdnkde hlnpedknve dgsfdysded nkplpnsqts ldgtikqqes ddslvdygeg
     1021 gegqfnedgs figqytvkkd keetegness eatspvnaiy sla
//
LOCUS       XP_041326432            1058 aa            linear   VRT 06-MAY-2021
DEFINITION  neurofascin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326432
VERSION     XP_041326432.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470498.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1058
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1058
                     /product="neurofascin isoform X4"
                     /calculated_mol_wt=118783
     Region          36..130
                     /region_name="IgI_hNeurofascin_like"
                     /note="Immunoglobulin (Ig)-like domain of human
                     neurofascin (NF); member of the I-set of Ig superfamily
                     (IgSF) domains; cd05875"
                     /db_xref="CDD:409459"
     Region          36..40
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409459"
     Region          45..49
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409459"
     Region          54..61
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409459"
     Region          67..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409459"
     Region          75..77
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409459"
     Region          84..87
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409459"
     Region          92..96
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409459"
     Region          109..117
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409459"
     Region          120..130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409459"
     Region          139..229
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          153..157
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          167..171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          205..210
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          247..329
                     /region_name="Ig3_L1-CAM_like"
                     /note="Third immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains;
                     cd05731"
                     /db_xref="CDD:409394"
     Region          259..263
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409394"
     Region          272..276
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409394"
     Region          294..298
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409394"
     Region          308..313
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409394"
     Region          321..324
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409394"
     Region          333..421
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          349..353
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          362..366
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          386..390
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          400..405
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          413..416
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          429..513
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          443..447
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          456..460
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          479..483
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          493..498
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          506..509
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          518..604
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          534..538
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          549..553
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          570..574
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          584..589
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          597..600
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          <620..>824
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          620..710
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(620,686,701)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(702..703,705..706)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          817..902
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(817,884,899)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          950..1034
                     /region_name="Bravo_FIGEY"
                     /note="Bravo-like intracellular region; pfam13882"
                     /db_xref="CDD:464016"
     CDS             1..1058
                     /gene="NFASC"
                     /coded_by="XM_041470498.1:272..3448"
                     /db_xref="GeneID:121355233"
ORIGIN      
        1 milrraqvtc ariafalclq hlisaievpl dlpqpptitk qsikdyivdp rdnifiecea
       61 kgnpvpifsw trngkffnva kdpkvsmrrr sgtlvidfhs ggrpddyege yqcfarndyg
      121 talsskihlq vsksplwpke kvdvievdeg aplslqcnpp pglpepvifw msssmepipq
      181 dkrvsqghng dlyfsnvlaq daltdyscna rfhfthtiqq knpytlkvkt trgisettps
      241 fmypygtsss qmvlrgvdll leciasgvpa pdimwykkgg elpvgktkle nfnkalrisn
      301 vseedsgeyf clasnkmgsi rhtisvrvka apywldepen lilapgedgr lvcrangnpk
      361 psiqwlvnge piessppnps revagdtivf rdtqigssav yqcnasnehg yllanafvsv
      421 ldvpprilgp rnqlirviqn nrtrldcpff gspiptlrwf kngqgntldg gnykahengs
      481 lemfmarked qgiytcvatn ilgkaeaqvr levkdptriv rgpedqvvkr gtmprlhcrv
      541 khdptlrlmv twlkddaply lgnrmkkeed gltiygvtek dqgdytcvas teldkdlaka
      601 yltvlaipan rlkdlpkarp drprdleltd laersvrltw ipgddnnspi tdyivqfeed
      661 rfqpgvwhdh srypgsvnsa vlnlspyvny qfrviavndv gssvpsepse ryqtngarpe
      721 inptgvqgag tqknnmeitw tplnatqayg pnlryivrwr rrdprgswyn etvrsarhvv
      781 wntpifvpye ikvqaendfg rapepdtyig ysgedlpssp rylrirqpnl eiinlewdhp
      841 ehpngiitgy tlqyqpfngs rmgrtvvenl spnqtrftlq rsdpisryrf klrartqvge
      901 getltedspa lldeaytknq vdiatqgwfi glmcaiallv lillivcfik rsrggkypvr
      961 dnkdehlnpe dknvedgsfd ysdednkplp nsqtsldgti kqqesddslv dygeggegqf
     1021 nedgsfigqy tvkkdkeete gnesseatsp vnaiysla
//
LOCUS       XP_041326433            1365 aa            linear   VRT 06-MAY-2021
DEFINITION  neurofascin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326433
VERSION     XP_041326433.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470499.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1365
                     /product="neurofascin isoform X5"
                     /calculated_mol_wt=152262
     Region          36..130
                     /region_name="IgI_hNeurofascin_like"
                     /note="Immunoglobulin (Ig)-like domain of human
                     neurofascin (NF); member of the I-set of Ig superfamily
                     (IgSF) domains; cd05875"
                     /db_xref="CDD:409459"
     Region          36..40
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409459"
     Region          45..49
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409459"
     Region          54..61
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409459"
     Region          67..72
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409459"
     Region          75..77
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409459"
     Region          84..87
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409459"
     Region          92..96
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409459"
     Region          109..117
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409459"
     Region          120..130
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409459"
     Region          139..229
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          153..157
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          167..171
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          190..194
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          205..210
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          221..224
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          264..346
                     /region_name="Ig3_L1-CAM_like"
                     /note="Third immunoglobulin (Ig)-like domain of the L1
                     cell adhesion molecule (CAM), and similar domains;
                     cd05731"
                     /db_xref="CDD:409394"
     Region          276..280
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409394"
     Region          289..293
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409394"
     Region          311..315
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409394"
     Region          325..330
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409394"
     Region          338..341
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409394"
     Region          350..438
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          366..370
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          379..383
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          403..407
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          417..422
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          430..433
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          446..530
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          460..464
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          473..477
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          496..500
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          510..515
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          523..526
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          535..621
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          551..555
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          566..570
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          587..591
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          601..606
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          614..617
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          637..727
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(637,703,718)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          <698..>856
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(719..720,722..723)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          837..936
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(925..926,928..929)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          941..1026
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(941,1008,1023)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Region          1131..1199
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Site            order(1202..1203,1205..1206)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          1253..1341
                     /region_name="Bravo_FIGEY"
                     /note="Bravo-like intracellular region; pfam13882"
                     /db_xref="CDD:464016"
     CDS             1..1365
                     /gene="NFASC"
                     /coded_by="XM_041470499.1:272..4369"
                     /db_xref="GeneID:121355233"
ORIGIN      
        1 milrraqvtc ariafalclq hlisaievpl dlpqpptitk qsikdyivdp rdnifiecea
       61 kgnpvpifsw trngkffnva kdpkvsmrrr sgtlvidfhs ggrpddyege yqcfarndyg
      121 talsskihlq vsksplwpke kvdvievdeg aplslqcnpp pglpepvifw msssmepipq
      181 dkrvsqghng dlyfsnvlaq daltdyscna rfhfthtiqq knpytlkvkt kkshnetslg
      241 nspamyrarg isettpsfmy pygtsssqmv lrgvdlllec iasgvpapdi mwykkggelp
      301 vgktklenfn kalrisnvse edsgeyfcla snkmgsirht isvrvkaapy wldepenlil
      361 apgedgrlvc rangnpkpsi qwlvngepie ssppnpsrev agdtivfrdt qigssavyqc
      421 nasnehgyll anafvsvldv pprilgprnq lirviqnnrt rldcpffgsp iptlrwfkng
      481 qgntldggny kahengslem fmarkedqgi ytcvatnilg kaeaqvrlev kdptrivrgp
      541 edqvvkrgtm prlhcrvkhd ptlrlmvtwl kddaplylgn rmkkeedglt iygvtekdqg
      601 dytcvastel dkdlakaylt vlaipanrlk dlpkarpdrp rdleltdlae rsvrltwipg
      661 ddnnspitdy ivqfeedrfq pgvwhdhsry pgsvnsavln lspyvnyqfr viavndvgss
      721 vpsepseryq tngarpeinp tgvqgagtqk nnmeitwtpl natqaygpnl ryivrwrrrd
      781 prgswynetv rsarhvvwnt pifvpyeikv qaendfgrap epdtyigysg edypkaaptd
      841 vrirvlnsta ialtwtrvhl dtiqgqlkey rayfwrdssl lknlwvskkr qfvsfpgdrn
      901 rgivsrlfpy snyklemvvt ngrgdgprse mkefptpegv pssprylrir qpnleiinle
      961 wdhpehpngi itgytlqyqp fngsrmgrtv venlspnqtr ftlqrsdpis ryrfklrart
     1021 qvgegetlte dspalldeea tgppptavee tspetspett petsptvspt vspttspttt
     1081 ptttdttttt tttttttsat staastaast saaaerapaa ttrhelaang ssiwdvrama
     1141 nsnwanitws hnfsagtdfv vkyitsnkte ksipvkaqgp ssvqladltp gmmyklwvfp
     1201 iwshpsehsy itfttssayt knqvdiatqg wfiglmcaia llvlillivc fikrsrggky
     1261 pvrdnkdehl npedknvedg sfdyrslesd ednkplpnsq tsldgtikqq esddslvdyg
     1321 eggegqfned gsfigqytvk kdkeetegne sseatspvna iysla
//
LOCUS       XP_041326434            1036 aa            linear   VRT 06-MAY-2021
DEFINITION  contactin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326434
VERSION     XP_041326434.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470500.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1036
                     /product="contactin-2"
                     /calculated_mol_wt=113084
     Region          30..126
                     /region_name="IgI_1_Contactin-2"
                     /note="First immunoglobulin (Ig) domain of contactin-2;
                     member of the I-set of Ig superfamily domains; cd05850"
                     /db_xref="CDD:409437"
     Site            order(31..32,113..116)
                     /site_type="other"
                     /note="interdomain interface [polypeptide binding]"
                     /db_xref="CDD:409437"
     Region          33..37
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409437"
     Region          40..45
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409437"
     Region          51..59
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409437"
     Region          64..70
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409437"
     Region          72..75
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409437"
     Region          82..86
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409437"
     Region          88..94
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409437"
     Region          101..110
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409437"
     Region          113..126
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409437"
     Region          134..223
                     /region_name="Ig2_Contactin-2-like"
                     /note="Second Ig domain of the neural cell adhesion
                     molecule contactin-2, and similar domains; cd05727"
                     /db_xref="CDD:409392"
     Region          136..141
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409392"
     Region          145..151
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409392"
     Site            order(146,176,179,181)
                     /site_type="other"
                     /note="domain-domain interface [polypeptide binding]"
                     /db_xref="CDD:409392"
     Region          159..165
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409392"
     Region          170..172
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:409392"
     Region          177..182
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409392"
     Region          185..189
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409392"
     Region          199..207
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409392"
     Region          211..223
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409392"
     Region          234..319
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          252..256
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          265..269
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          284..288
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          298..303
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          311..314
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          323..407
                     /region_name="Ig4_Contactin-2-like"
                     /note="Fourth Ig domain of the neural cell adhesion
                     molecule contactin-2, and similar domains; cd05728"
                     /db_xref="CDD:143205"
     Region          323..326
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:143205"
     Region          330..334
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:143205"
     Region          338..346
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:143205"
     Region          352..357
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:143205"
     Site            order(356,387,389,404)
                     /site_type="other"
                     /note="domain-domain interface [polypeptide binding]"
                     /db_xref="CDD:143205"
     Region          359..362
                     /region_name="Ig strand C'"
                     /note="Ig strand C' [structural motif]"
                     /db_xref="CDD:143205"
     Region          367..371
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:143205"
     Region          373..378
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:143205"
     Region          387..394
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:143205"
     Region          398..407
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:143205"
     Region          412..500
                     /region_name="Ig5_Contactin"
                     /note="Fifth immunoglobulin (Ig) domain of contactin;
                     cd04969"
                     /db_xref="CDD:409358"
     Region          412..417
                     /region_name="Ig strand A"
                     /note="Ig strand A [structural motif]"
                     /db_xref="CDD:409358"
     Region          420..425
                     /region_name="Ig strand A'"
                     /note="Ig strand A' [structural motif]"
                     /db_xref="CDD:409358"
     Region          429..436
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409358"
     Region          444..448
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409358"
     Region          462..465
                     /region_name="Ig strand D"
                     /note="Ig strand D [structural motif]"
                     /db_xref="CDD:409358"
     Region          466..471
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409358"
     Region          479..487
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409358"
     Region          493..500
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409358"
     Region          502..598
                     /region_name="Ig"
                     /note="Immunoglobulin domain; cl11960"
                     /db_xref="CDD:472250"
     Region          521..525
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          536..540
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          565..569
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          579..584
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          592..595
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     Region          613..700
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(688..689,691..692)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          719..801
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(791..792,794..795)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          810..896
                     /region_name="fn3"
                     /note="Fibronectin type III domain; pfam00041"
                     /db_xref="CDD:394996"
     Site            order(892..893,895..896)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     CDS             1..1036
                     /gene="CNTN2"
                     /coded_by="XM_041470500.1:171..3281"
                     /db_xref="GeneID:121355234"
ORIGIN      
        1 mggtagfiha slavgtflvw cqaqsgmrsy gpvfeeqpsh tlfpegsaee kvtlacrara
       61 nppatyrwkm ngtelklepe sryrlvagdl visnpvkakd sgsyqcvasn srgtvvsrea
      121 slrfgflqef saeerdpvki tegwgvmftc sppphypgls yrwllnefpn fipadgrrfi
      181 sqttgnlyia kteasdlgny scfatshidf itksvfskfs rlslaaedar qfppsikarf
      241 padtyalagq vvtlecfafg npvprikwrk ldgpqsskwi gsepllqiqh agfedegtye
      301 ceaenakgrd thqgriiiha qpewldvisd teadigsdlr wscvasgkpr ptvrwlrdgq
      361 pltsqnriev sggelrfskl vledsgmyqc vaenkhgtvy asaeltvqal apdfrlspvk
      421 rlipaarsgk viipcqpraa pkatvlwtkg tellvnssrv mitadgtlil qnisksdegk
      481 ytcfaenfmg kanstgilsv rdatkitlap ssadinvgen ltlqchashd ptmdltftws
      541 lddfpidfdk seghyrrasa keaigdlsis naqlrhsgry tctaqtvvds asesatltvr
      601 gppgppggvv vrdigdtsvq lswsrgfdnh spiaryliea rtllssqwkq mrtnpvnieg
      661 naetaqvvnl ipwmdyefrv lasnilgige pslpsskirt keaaptvaps glgggggapn
      721 eliitwtptl rdyqngdgfg yivsfrrkgs qawlrarvph aeslqfvyrn esiapytpfe
      781 vkikaynrkg egpesltaiv ysaeeepkaa pyrviaksvl ssemdvswep veqgemtgvl
      841 lgyeirywkd gdkeeaadrv rtaglvtsah viglnpntdy hvsvraynra gtgppspatn
      901 vtttrpppkr ppgniswtfs gstvsikwdp vvakadesav tgykmlyrqd shsaptlyla
      961 sksqidipip edfthafvqi rvtgpggdgt paevhilrns gtsmmvedsg mrpaphvvai
     1021 atnsllmval isslel
//
LOCUS       XP_041326436             690 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326436
VERSION     XP_041326436.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470502.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..690
                     /product="transmembrane and coiled-coil domains protein 2
                     isoform X1"
                     /calculated_mol_wt=75507
     Region          268..676
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..690
                     /gene="TMCC2"
                     /coded_by="XM_041470502.1:47..2119"
                     /db_xref="GeneID:121355235"
ORIGIN      
        1 mkrcrsdelq qpeedpgaag espghgvmeg kageaaaape agavpapprs kppdlkkiqq
       61 lsegsmfshg lkhlfhsrrr srereqpssq dpgppgppaa phgasdhesp dekerspemh
      121 rvsyavslhd lparptafnr vlqqirsrps ikrgtslhsg srraksgsle pqkgsphlgr
      181 kapqdsglta ilhqhqgrpr sssttdtail laesgavyll aedsegladk ldkgdvtaln
      241 lpagaghgdt dgpvcldvpd gtpdpqrtka aiehlhqkil kiteqikieq earddnvaey
      301 lklannadkq qasrikqvfe kknqksaqti aqlhkklehy hkklkeieqn gptrqpkdvf
      361 rdmhqglkdv ganvrssisg fsggvvegvk gglsglsqat htavvskpre faslirnkfg
      421 sadniahlkd tlddghpeea sralsgsatl vsspkygsdd ecssatsgsa ggsnsgagpg
      481 glgspksntl dshhnsfdti leelreikds qshledsmed lkaqlqrdyt ymtqclqeer
      541 yryerleeql ndltelhqne mtnlkqelas meekvayqsy erardiqeav escltrvtkl
      601 elqqqqqqvv qlegvenana rallgkfinv ilalmavllv fvstianfit plmktrmril
      661 stallvlflf flwkhwdsis yflehvllps
//
LOCUS       XP_041326437             465 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326437
VERSION     XP_041326437.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470503.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..465
                     /product="transmembrane and coiled-coil domains protein 2
                     isoform X2"
                     /calculated_mol_wt=51495
     Region          43..451
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..465
                     /gene="TMCC2"
                     /coded_by="XM_041470503.1:671..2068"
                     /db_xref="GeneID:121355235"
ORIGIN      
        1 mvhvqldkgd vtalnlpaga ghgdtdgpvc ldvpdgtpdp qrtkaaiehl hqkilkiteq
       61 ikieqeardd nvaeylklan nadkqqasri kqvfekknqk saqtiaqlhk klehyhkklk
      121 eieqngptrq pkdvfrdmhq glkdvganvr ssisgfsggv vegvkgglsg lsqathtavv
      181 skprefasli rnkfgsadni ahlkdtlddg hpeeasrals gsatlvsspk ygsddecssa
      241 tsgsaggsns gagpgglgsp ksntldshhn sfdtileelr eikdsqshle dsmedlkaql
      301 qrdytymtqc lqeeryryer leeqlndlte lhqnemtnlk qelasmeekv ayqsyerard
      361 iqeavesclt rvtklelqqq qqqvvqlegv enanarallg kfinvilalm avllvfvsti
      421 anfitplmkt rmrilstall vlflfflwkh wdsisyfleh vllps
//
LOCUS       XP_041326438             462 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane and coiled-coil domains protein 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326438
VERSION     XP_041326438.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470504.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..462
                     /product="transmembrane and coiled-coil domains protein 2
                     isoform X3"
                     /calculated_mol_wt=51161
     Region          40..448
                     /region_name="Tmemb_cc2"
                     /note="Predicted transmembrane and coiled-coil 2 protein;
                     pfam10267"
                     /db_xref="CDD:463036"
     CDS             1..462
                     /gene="TMCC2"
                     /coded_by="XM_041470504.1:357..1745"
                     /db_xref="GeneID:121355235"
ORIGIN      
        1 meldkgdvta lnlpagaghg dtdgpvcldv pdgtpdpqrt kaaiehlhqk ilkiteqiki
       61 eqearddnva eylklannad kqqasrikqv fekknqksaq tiaqlhkkle hyhkklkeie
      121 qngptrqpkd vfrdmhqglk dvganvrssi sgfsggvveg vkgglsglsq athtavvskp
      181 refaslirnk fgsadniahl kdtlddghpe easralsgsa tlvsspkygs ddecssatsg
      241 saggsnsgag pgglgspksn tldshhnsfd tileelreik dsqshledsm edlkaqlqrd
      301 ytymtqclqe eryryerlee qlndltelhq nemtnlkqel asmeekvayq syerardiqe
      361 avescltrvt klelqqqqqq vvqlegvena narallgkfi nvilalmavl lvfvstianf
      421 itplmktrmr ilstallvlf lfflwkhwds isyflehvll ps
//
LOCUS       XP_041326439             675 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat neuronal protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326439
VERSION     XP_041326439.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470505.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..675
                     /product="leucine-rich repeat neuronal protein 2"
                     /calculated_mol_wt=74873
     Region          51..68
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          70..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <87..349
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          94..117
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          118..141
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..165
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          166..189
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          190..213
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          214..237
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          238..261
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          262..285
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          286..310
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          311..333
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          336..359
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          341..>433
                     /region_name="PCC"
                     /note="polycystin cation channel protein; TIGR00864"
                     /db_xref="CDD:188093"
     Region          360..372
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          429..513
                     /region_name="IG_like"
                     /note="Immunoglobulin like; smart00410"
                     /db_xref="CDD:214653"
     Region          440..444
                     /region_name="Ig strand B"
                     /note="Ig strand B [structural motif]"
                     /db_xref="CDD:409353"
     Region          453..457
                     /region_name="Ig strand C"
                     /note="Ig strand C [structural motif]"
                     /db_xref="CDD:409353"
     Region          479..483
                     /region_name="Ig strand E"
                     /note="Ig strand E [structural motif]"
                     /db_xref="CDD:409353"
     Region          493..498
                     /region_name="Ig strand F"
                     /note="Ig strand F [structural motif]"
                     /db_xref="CDD:409353"
     Region          506..509
                     /region_name="Ig strand G"
                     /note="Ig strand G [structural motif]"
                     /db_xref="CDD:409353"
     CDS             1..675
                     /gene="LRRN2"
                     /coded_by="XM_041470505.1:459..2486"
                     /db_xref="GeneID:121355236"
ORIGIN      
        1 mrglqpscll lcvvaasamp tvpwrvacpp rcvcqirpwy tprsayreaa tvdcndlfit
       61 svppelpegt qtlllqsnni arleqgelgy lrnlseldls qnsfsdvwdf glrnmpqlls
      121 lhleenqlse lpdssfpglg nlqelylnhn rlrsiapraf aglgsllrlh lnsnllrtld
      181 srwfqmlpsl eilmvggnkv daildmnfrp lgnlrslvla gmqlreisdy aleglrsles
      241 lsfydnklad vpkralqqvp glkfldlnkn plqrvkqsdf tnmlhlkelg lnnmdelvsi
      301 dqfalinlpe ltkldvtnnp klsfihpkaf qhlpqletlm lnnnalsalh rqtveslpnl
      361 qeisihgnpl rcdcvirwvn strprvrfie pqstlcaepp dlqrrhirdv pfremteqcl
      421 plisarsipa rleaevgdnv alhcralaep epeiywvtpa gvkllpfgdd gkfkvhsegt
      481 leirgiaare aglytcvahn llgadtrgvr vlvnrsfplg qaelellvvd vqphhvllaw
      541 rpclnavssn ltwaspalgw rlgaaripag thsfnvtrlr pdteyraclh vtlvaspvrv
      601 acvttrtkea tqgmpwgqgt lvtalllcll llgaaarags rreslrgaga vrvvypvqpq
      661 ghllavevqa aplec
//
LOCUS       XP_041326441             632 aa            linear   VRT 06-MAY-2021
DEFINITION  NUAK family SNF1-like kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326441
VERSION     XP_041326441.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470507.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..632
                     /product="NUAK family SNF1-like kinase 2"
                     /calculated_mol_wt=69411
     Region          45..299
                     /region_name="STKc_NUAK2"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     novel (nua) kinase family NUAK 2; cd14161"
                     /db_xref="CDD:271063"
     Site            order(55..59,63,75,77,109,125..128,132,134..135,137,
                     170..171,173,175..176,178,188..189,192,205..210,212,
                     242..245,247)
                     /site_type="active"
                     /db_xref="CDD:271063"
     Site            order(55..58,63,75,77,109,125..128,132,175..176,178,
                     188..189)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:271063"
     Site            order(132,134..135,137,171,173,175,192,205..210,212,
                     242..245,247)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:271063"
     Site            188..210
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:271063"
     CDS             1..632
                     /gene="NUAK2"
                     /coded_by="XM_041470507.1:6..1904"
                     /db_xref="GeneID:121355237"
ORIGIN      
        1 meraaapgtg sasalaasla egliksprpl mkkqavkrhh hkhnlkhrye fletlgkgty
       61 gkvkkarers gklvaiksir kdkikdeqdl vhirreieim sslnhphiia vhevfensak
      121 ivivmeyask gdlydyiser qrlseqearh ffrqvvsavy ychkngivhr dlklenilld
      181 angnikiadf glsnvfqqdk llqtycgspl yaspeiingr pykgpevdsw slgvllyilv
      241 hgtmpfdghd yktlvkqits gdyreptkls dacglirwml mvnperrati ediathwwvn
      301 wgykmplgeq ellrenespl atvaewlrrs srpllengsk vrcflkqhmp gaalerqrsl
      361 kkskkendvs halqevpagp enasksvlkr pkgilkkrns ceqkvpspgp ppgeggegpp
      421 aglsrvlqpp gtagaappaa pkkgilkkps aresgyyssl eccesgdvld agsldldgav
      481 faeppcpapq glparrkgil khngkfssgs aepgsppgrg fggfsevslp qgprarpasa
      541 vsedsilste sfdqlelpar rppgaamrgc vsaesllrle eeeereegrr lrrwtvthcr
      601 splaessasl agcdsgtely rqravavgvk ls
//
LOCUS       XP_041326442             608 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SOX-13 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326442
VERSION     XP_041326442.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470508.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="transcription factor SOX-13 isoform X1"
                     /calculated_mol_wt=67472
     Region          410..486
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(410,412..413,415..416,418..419,423,426,430,437..439,
                     442..443,446,449..450,468,478,480..483)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..608
                     /gene="SOX13"
                     /coded_by="XM_041470508.1:210..2036"
                     /db_xref="GeneID:121355238"
ORIGIN      
        1 msmrspvspp peldgagtmv ncavkteekk eggpetppga apsaeprphd ppgppprdgt
       61 dpqglpqest gdvpeprrsa fepagsgqek ldfnrnlkev mptiekllas dwkerllgrn
      121 taeskevkgt qeslaekelq llvminqlst lrdqlltahs eqknmatmlf ekqqqqmela
      181 rqqqeqiakq qqqliqqqhk inllqqqiqq vnmpyvmipa ftpghqplpv spesqlalpi
      241 qpipckpvdy pvqllhsppp atlkrpegpg hlqmqetsqp lnltakpkgp elpsasssps
      301 lkmsgcqalp pshgasrelq sspsnlplgf lgegdaitka ihdarqllhg hgaamegsls
      361 spyrkepvgi dsspvkerme enpghrldea llscemdgsr hfpesrnnnh ikrpmnafmv
      421 wakderrkil qafpdmhnss iskilgsrwk smsnqekqpy yeeqarlsrq hlekypdyky
      481 kprpkrtciv egkrlrvgey kalmrnrrqd arqgyligpq gsqvppsssd vlyprpvgvq
      541 lpppllehyl prgvdptmpv ivntrslkdg dagddghsvp egdmyrysed edsegedksd
      601 gelvvltd
//
LOCUS       XP_041326443             608 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SOX-13 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326443
VERSION     XP_041326443.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470509.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="transcription factor SOX-13 isoform X1"
                     /calculated_mol_wt=67472
     Region          410..486
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(410,412..413,415..416,418..419,423,426,430,437..439,
                     442..443,446,449..450,468,478,480..483)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..608
                     /gene="SOX13"
                     /coded_by="XM_041470509.1:64..1890"
                     /db_xref="GeneID:121355238"
ORIGIN      
        1 msmrspvspp peldgagtmv ncavkteekk eggpetppga apsaeprphd ppgppprdgt
       61 dpqglpqest gdvpeprrsa fepagsgqek ldfnrnlkev mptiekllas dwkerllgrn
      121 taeskevkgt qeslaekelq llvminqlst lrdqlltahs eqknmatmlf ekqqqqmela
      181 rqqqeqiakq qqqliqqqhk inllqqqiqq vnmpyvmipa ftpghqplpv spesqlalpi
      241 qpipckpvdy pvqllhsppp atlkrpegpg hlqmqetsqp lnltakpkgp elpsasssps
      301 lkmsgcqalp pshgasrelq sspsnlplgf lgegdaitka ihdarqllhg hgaamegsls
      361 spyrkepvgi dsspvkerme enpghrldea llscemdgsr hfpesrnnnh ikrpmnafmv
      421 wakderrkil qafpdmhnss iskilgsrwk smsnqekqpy yeeqarlsrq hlekypdyky
      481 kprpkrtciv egkrlrvgey kalmrnrrqd arqgyligpq gsqvppsssd vlyprpvgvq
      541 lpppllehyl prgvdptmpv ivntrslkdg dagddghsvp egdmyrysed edsegedksd
      601 gelvvltd
//
LOCUS       XP_041326444             607 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SOX-13 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326444
VERSION     XP_041326444.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470510.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..607
                     /product="transcription factor SOX-13 isoform X2"
                     /calculated_mol_wt=67343
     Region          409..485
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(409,411..412,414..415,417..418,422,425,429,436..438,
                     441..442,445,448..449,467,477,479..482)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..607
                     /gene="SOX13"
                     /coded_by="XM_041470510.1:210..2033"
                     /db_xref="GeneID:121355238"
ORIGIN      
        1 msmrspvspp peldgagtmv ncavkteekk eggpetppga apsaeprphd ppgppprdgt
       61 dpqglpqest gdvpeprrsa fepagsgqek ldfnrnlkev mptiekllas dwkerllgrn
      121 taeskevkgt qeslaekelq llvminqlst lrdqlltahs eqknmatmlf ekqqqqmela
      181 rqqqeqiakq qqqliqqqhk inllqqqiqv nmpyvmipaf tpghqplpvs pesqlalpiq
      241 pipckpvdyp vqllhspppa tlkrpegpgh lqmqetsqpl nltakpkgpe lpsassspsl
      301 kmsgcqalpp shgasrelqs spsnlplgfl gegdaitkai hdarqllhgh gaamegslss
      361 pyrkepvgid sspvkermee npghrldeal lscemdgsrh fpesrnnnhi krpmnafmvw
      421 akderrkilq afpdmhnssi skilgsrwks msnqekqpyy eeqarlsrqh lekypdykyk
      481 prpkrtcive gkrlrvgeyk almrnrrqda rqgyligpqg sqvppsssdv lyprpvgvql
      541 pppllehylp rgvdptmpvi vntrslkdgd agddghsvpe gdmyrysede dsegedksdg
      601 elvvltd
//
LOCUS       XP_041326445             602 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SOX-13 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326445
VERSION     XP_041326445.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470511.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..602
                     /product="transcription factor SOX-13 isoform X3"
                     /calculated_mol_wt=66840
     Region          410..486
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(410,412..413,415..416,418..419,423,426,430,437..439,
                     442..443,446,449..450,468,478,480..483)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..602
                     /gene="SOX13"
                     /coded_by="XM_041470511.1:210..2018"
                     /db_xref="GeneID:121355238"
ORIGIN      
        1 msmrspvspp peldgagtmv ncavkteekk eggpetppga apsaeprphd ppgppprdgt
       61 dpqglpqest gdvpeprrsa fepagsgqek ldfnrnlkev mptiekllas dwkerllgrn
      121 taeskevkgt qeslaekelq llvminqlst lrdqlltahs eqknmatmlf ekqqqqmela
      181 rqqqeqiakq qqqliqqqhk inllqqqiqq vnmpyvmipa ftpghqplpv spesqlalpi
      241 qpipckpvdy pvqllhsppp atlkrpegpg hlqmqetsqp lnltakpkgp elpsasssps
      301 lkmsgcqalp pshgasrelq sspsnlplgf lgegdaitka ihdarqllhg hgaamegsls
      361 spyrkepvgi dsspvkerme enpghrldea llscemdgsr hfpesrnnnh ikrpmnafmv
      421 wakderrkil qafpdmhnss iskilgsrwk smsnqekqpy yeeqarlsrq hlekypdyky
      481 kprpkrtciv egkrlrvgey kalmrnrrqd arpqgsqvpp sssdvlyprp vgvqlpppll
      541 ehylprgvdp tmpvivntrs lkdgdagddg hsvpegdmyr ysededsege dksdgelvvl
      601 td
//
LOCUS       XP_041326446             608 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription factor SOX-13 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326446
VERSION     XP_041326446.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470512.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..608
                     /product="transcription factor SOX-13 isoform X4"
                     /calculated_mol_wt=67414
     Region          410..486
                     /region_name="HMG-box_SoxD"
                     /note="high mobility group (HMG)-box found in group D
                     SRY-related high-mobility group (HMG) box (Sox)
                     transcription factors; cd22030"
                     /db_xref="CDD:438839"
     Site            order(410,412..413,415..416,418..419,423,426,430,437..439,
                     442..443,446,449..450,468,478,480..483)
                     /site_type="other"
                     /note="putative DNA binding site [nucleotide binding]"
                     /db_xref="CDD:438839"
     CDS             1..608
                     /gene="SOX13"
                     /coded_by="XM_041470512.1:210..2036"
                     /db_xref="GeneID:121355238"
ORIGIN      
        1 msmrspvspp peldgagtmv ncavkteekk eggpetppga apsaeprphd ppgppprdgt
       61 dpqglpqest gdvpeprrsa fepagsgqek ldfnrnlkev mptiekllas dwkerllgrn
      121 taeskevkgt qeslaekelq llvminqlst lrdqlltahs eqknmatmlf ekqqqqmela
      181 rqqqeqiakq qqqliqqqhk inllqqqiqq vnmpyvmipa ftpghqplpv spesqlalpi
      241 qpipckpvdy pvqllhsppp atlkrpagpg hlqmqetsqp lnltakpkgp elpsasssps
      301 lkmsgcqalp pshgasrelq sspsnlplgf lgegdaitka ihdarqllhg hgaamegsls
      361 spyrkepvgi dsspvkerme enpghrldea llscemdgsr hfpesrnnnh ikrpmnafmv
      421 wakderrkil qafpdmhnss iskilgsrwk smsnqekqpy yeeqarlsrq hlekypdyky
      481 kprpkrtciv egkrlrvgey kalmrnrrqd arqgyligpq gsqvppsssd vlyprpvgvq
      541 lpppllehyl prgvdptmpv ivntrslkdg dagddghsvp egdmyrysed edsegedksd
      601 gelvvltd
//
LOCUS       XP_041326447             538 aa            linear   VRT 06-MAY-2021
DEFINITION  protein phosphatase 1 regulatory subunit 15B [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326447
VERSION     XP_041326447.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470513.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..538
                     /product="protein phosphatase 1 regulatory subunit 15B"
                     /calculated_mol_wt=59353
     Region          46..189
                     /region_name="CReP_N"
                     /note="eIF2-alpha phosphatase phosphorylation constitutive
                     repressor; pfam10472"
                     /db_xref="CDD:371074"
     Region          255..527
                     /region_name="PP1c_bdg"
                     /note="Phosphatase-1 catalytic subunit binding region;
                     pfam10488"
                     /db_xref="CDD:431311"
     CDS             1..538
                     /gene="PPP1R15B"
                     /coded_by="XM_041470513.1:254..1870"
                     /db_xref="GeneID:121355239"
ORIGIN      
        1 mehsgrerag pglgwarlgl aaawpklaap saapaggssq asppfswlrv vsqllsplpa
       61 llqrllpgaa lssalcpaka ppplvllpka dtsldwteee ppekrpeggp eqpaglwgag
      121 vvrsslralp mdwyvlgleq gkshlpqplr aeglpevefl rskrlaflqr whlpvpdpdh
      181 gyhsleeeqq qqhrgvcrei geqrgnsgdl eppedagrqp ggvpvererl rgeaeegeal
      241 geeeredset eqnfpissrp acanklidyi iggvssgees egeedwdddd dgdeddgggf
      301 dseelpsdsd agsqdgerlh lwnsfysldp ynpqnftati qtsssepgkg msdmeeeeee
      361 edswgesseg spsseedewd cesvdeaenl klwnsfcssd dpynplnfta afqtaekkgt
      421 pgfqgaeras svtsehfslc rvqlekhncg stepgqsrek tasskrkkvt fheevteyyi
      481 sgeedrkgpw eelardgcrf qkriqeteea igyclstehr lrvfhrlqes hsqrtepf
//
LOCUS       XP_041326448             470 aa            linear   VRT 06-MAY-2021
DEFINITION  protein Mdm4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326448
VERSION     XP_041326448.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470514.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..470
                     /product="protein Mdm4"
                     /calculated_mol_wt=52403
     Region          28..105
                     /region_name="MDM4"
                     /note="p53-binding domain found in MDM4 and similar
                     proteins; cd17673"
                     /db_xref="CDD:349492"
     Site            order(52,55..56,59..60,65,70..71,73,91,94,97..98)
                     /site_type="other"
                     /note="p53 binding site [polypeptide binding]"
                     /db_xref="CDD:349492"
     Region          289..318
                     /region_name="zf-RanBP"
                     /note="Zn-finger in Ran binding protein and others;
                     pfam00641"
                     /db_xref="CDD:395516"
     Region          413..470
                     /region_name="mRING-HC-C2H2C4_MDM4"
                     /note="Modified RING finger, HC subclass (C2H2C4-type),
                     found in protein MDM4 and similar proteins; cd16784"
                     /db_xref="CDD:319698"
     Site            order(428,430,432..438,456,463,465..466)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:319698"
     CDS             1..470
                     /gene="MDM4"
                     /coded_by="XM_041470514.1:162..1574"
                     /db_xref="GeneID:121355240"
ORIGIN      
        1 msfpnstqpp gagnscritl gqanqvvpkl pllrilqaag aqgdsftlke vmhflgqyim
       61 arqlydkrqq hlvhcggdql gellglqsfs vkdpspvyem lkrnlspaal pdaaqtlpke
      121 qsvakpspdq lqlsqeegsd sgilegdskt sapatseskc dtcedsdlie nlskskkpkl
      181 dlvfeewdva glpwwflgnl rsnyksrsng stdiqtnqdi dtaivsdttd dlwflnecpl
      241 dqstaglkve vldceevteg dtkvpedvcl deledsqcls ddtdteaase dcwqcskcrk
      301 fnspgkrycf rcwalrkdwy rdcpklphsl slsninsmen qeqdegtdvp dcrrtisapa
      361 gqprhlflge nkphvdpsss iesldlareg knrdfaklkk eeemeslesi ktllnpcflc
      421 qhrprdgniv hgrtahlvac frcarmlkkk rspcpvcrke ikmvirifmg
//
LOCUS       XP_041326450             132 aa            linear   VRT 06-MAY-2021
DEFINITION  vesicle transport protein GOT1A [Pyrgilauda ruficollis].
ACCESSION   XP_041326450
VERSION     XP_041326450.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470516.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..132
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..132
                     /product="vesicle transport protein GOT1A"
                     /calculated_mol_wt=14621
     Region          4..112
                     /region_name="Got1"
                     /note="Got1/Sft2-like family; cl02130"
                     /db_xref="CDD:470475"
     CDS             1..132
                     /gene="GOLT1A"
                     /coded_by="XM_041470516.1:1..399"
                     /db_xref="GeneID:121355241"
ORIGIN      
        1 mvslsdfqri gvglvgfglf fllfgillyf dsvllafgnl lflsglvfii gfrrtftfff
       61 qrpklkgtsf ffgglivvlm rwpilgmlle aygfislfrs ffpvafgflg slanipllsq
      121 llqkmgdsgs mv
//
LOCUS       XP_041326451             474 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 18 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326451
VERSION     XP_041326451.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470517.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="cyclin-dependent kinase 18 isoform X1"
                     /calculated_mol_wt=53932
     Region          138..425
                     /region_name="STKc_PCTAIRE3"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     PCTAIRE-3 kinase; cd07871"
                     /db_xref="CDD:270853"
     Site            order(150..153,158,171,173,189,203,219..222,225,227..228,
                     265,267,269..270,272,283,286,298,300..303,305,343..344)
                     /site_type="active"
                     /db_xref="CDD:270853"
     Site            order(150..153,158,171,173,203,219..222,225,228,269..270,
                     272,283)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270853"
     Site            order(181..183,185,188..189,191..192,195..196,208,210,215,
                     254,257..260,288,290..293,297..298,411,415..417)
                     /site_type="other"
                     /note="putative CDK/cyclin interface [polypeptide
                     binding]"
                     /db_xref="CDD:270853"
     Site            order(189,227,265,267,286,298,300..303,305,343..344)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270853"
     Site            282..305
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270853"
     CDS             1..474
                     /gene="CDK18"
                     /coded_by="XM_041470517.1:208..1632"
                     /db_xref="GeneID:121355242"
ORIGIN      
        1 mnkmknfkrr fslsvprtet ieesltefte qfnqlnnqrn edlaqghlql aqlgrevaad
       61 gspvsppegh grspvaavry rnhgqrrcsm edvskrlslp mdirlppefl qklqmeslel
      121 pkplsrmsrr aslsdigfgk letyikldkl gegtyatvfk grskltenlv alkeirlehe
      181 egapctaire vsllknlkha nivtlhdiih tercltlvfe yldndlkqyl encgnlmsvh
      241 nvkifmfqll rglaychgrk ilhrdlkpqn llinergelk ladfglarak svptktysne
      301 vvtlwyrppd vllgsteyst pidmwgvgci hyemvtgrpm fpgstvkeel hlifrllgtp
      361 tedtwpgits neefkaynfs qyraqpllnh aprldsegvd lltnlllyra kgrisaeaal
      421 qhpyfrslge rvhllpdtas ifslkeiqlq kdpgqrgsaf qhsargknrr qsif
//
LOCUS       XP_041326452             374 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 18 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326452
VERSION     XP_041326452.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470518.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..374
                     /product="cyclin-dependent kinase 18 isoform X2"
                     /calculated_mol_wt=42572
     Region          38..325
                     /region_name="STKc_PCTAIRE3"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     PCTAIRE-3 kinase; cd07871"
                     /db_xref="CDD:270853"
     Site            order(50..53,58,71,73,89,103,119..122,125,127..128,165,
                     167,169..170,172,183,186,198,200..203,205,243..244)
                     /site_type="active"
                     /db_xref="CDD:270853"
     Site            order(50..53,58,71,73,103,119..122,125,128,169..170,172,
                     183)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270853"
     Site            order(81..83,85,88..89,91..92,95..96,108,110,115,154,
                     157..160,188,190..193,197..198,311,315..317)
                     /site_type="other"
                     /note="putative CDK/cyclin interface [polypeptide
                     binding]"
                     /db_xref="CDD:270853"
     Site            order(89,127,165,167,186,198,200..203,205,243..244)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270853"
     Site            182..205
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270853"
     CDS             1..374
                     /gene="CDK18"
                     /coded_by="XM_041470518.1:42..1166"
                     /db_xref="GeneID:121355242"
ORIGIN      
        1 mdirlppefl qklqmeslel pkplsrmsrr aslsdigfgk letyikldkl gegtyatvfk
       61 grskltenlv alkeirlehe egapctaire vsllknlkha nivtlhdiih tercltlvfe
      121 yldndlkqyl encgnlmsvh nvkifmfqll rglaychgrk ilhrdlkpqn llinergelk
      181 ladfglarak svptktysne vvtlwyrppd vllgsteyst pidmwgvgci hyemvtgrpm
      241 fpgstvkeel hlifrllgtp tedtwpgits neefkaynfs qyraqpllnh aprldsegvd
      301 lltnlllyra kgrisaeaal qhpyfrslge rvhllpdtas ifslkeiqlq kdpgqrgsaf
      361 qhsargknrr qsif
//
LOCUS       XP_041326453             382 aa            linear   VRT 06-MAY-2021
DEFINITION  fibromodulin [Pyrgilauda ruficollis].
ACCESSION   XP_041326453
VERSION     XP_041326453.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470519.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="fibromodulin"
                     /calculated_mol_wt=43625
     Region          82..115
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          113..136
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..>339
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          137..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..183
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          184..207
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          208..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..251
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          252..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          276..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          321..341
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..382
                     /gene="FMOD"
                     /coded_by="XM_041470519.1:315..1463"
                     /db_xref="GeneID:121355243"
ORIGIN      
        1 mpratilili laglcgsslg qyneeedlaw lqyylrqsrv ssynyvpyye eespayaysy
       61 psatdtepep epepqqvapw rcpqecdcpp nfssamycdt rnlrylpfvp srmkyvyfqn
      121 nlitsiqega fdnatelewl alhnnqisse kmgkrvfgkl qrlerlymnn nnltrlpgpl
      181 prslrelhls ynqiskvpsn aleglenlta lylshnfife mgaslkglks liladlsynn
      241 lrkvpdglpa sleqlyleyn yinaipddyf qvsprllyvr mshnsltnqg lssntfnsss
      301 ileldlsynr lqkiprvntn lenlylqgnq inefsissfc svvdvmnysr lqvlrldgna
      361 ikrnavppda plclrratvi ei
//
LOCUS       XP_041326454             371 aa            linear   VRT 06-MAY-2021
DEFINITION  prolargin [Pyrgilauda ruficollis].
ACCESSION   XP_041326454
VERSION     XP_041326454.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470520.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..371
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..371
                     /product="prolargin"
                     /calculated_mol_wt=42183
     Region          60..95
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; smart00013"
                     /db_xref="CDD:214470"
     Region          92..115
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          97..>352
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          116..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..160
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          161..184
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          185..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..255
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          256..280
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     CDS             1..371
                     /gene="LOC121355244"
                     /coded_by="XM_041470520.1:37..1152"
                     /db_xref="GeneID:121355244"
ORIGIN      
        1 mkaalafllp lalalapaas gqrrkpprrp trppapfeep veptelpppl ppgppsvfpd
       61 cprecycppd fpsalycdsr nlrtvpvipp rihylylqnn fiadlpeesf rnatglkwvn
      121 ldnnrirkvd rkvleklenl iflymernql kevpaflppn leqlrlsrnq iskipagvfn
      181 klenlvlldl hhnklsdgvf nkntfkglkn lmqlnlahni lrkmppgvps aihqlfldrn
      241 niedipsdyf kefpnlafir lnynqisdkg lpknsfnltn llvlhlahnk ltnvpfissk
      301 lehlylnnns iekingtqic ptslvsiqdf spsdldsvpr lrylrldgnl lkppipldlm
      361 lcfrllqsvv f
//
LOCUS       XP_041326455             269 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch domain-containing protein 8A [Pyrgilauda ruficollis].
ACCESSION   XP_041326455
VERSION     XP_041326455.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470521.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="kelch domain-containing protein 8A"
                     /calculated_mol_wt=29682
     Region          2..259
                     /region_name="NanM"
                     /note="N-acetylneuraminic acid mutarotase [Cell
                     wall/membrane/envelope biogenesis]; COG3055"
                     /db_xref="CDD:442289"
     Region          36..81
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          84..129
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          131..184
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          187..233
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..269
                     /gene="KLHDC8A"
                     /coded_by="XM_041470521.1:1..810"
                     /db_xref="GeneID:121355245"
ORIGIN      
        1 mviggvgadq lplkvvemyn tdegrwrkrs slreaamgis vaakdyrvya aggmgsdlrp
       61 hnflqhydvl kdiwvslaam ptpryaatsi lrgtkiyvlg grqskyavna fevfdtdtrs
      121 wtkfpniptk rafssfvpte eklfslgglr qgrlyrqpkf mrtvdvfdle qggwmkters
      181 cylkkrradf vagylrgrvv vagglgnqpt vlesaeafhp eknkweslpp mptprcacss
      241 ialrdcllav ggvsqglsta vealclsds
//
LOCUS       XP_041326456             567 aa            linear   VRT 06-MAY-2021
DEFINITION  solute carrier family 45 member 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326456
VERSION     XP_041326456.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470522.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..567
                     /product="solute carrier family 45 member 3"
                     /calculated_mol_wt=60927
     Region          10..551
                     /region_name="MFS_SLC45_SUC"
                     /note="Solute carrier family 45 and similar sugar
                     transporters of the Major Facilitator Superfamily of
                     transporters; cd17313"
                     /db_xref="CDD:340871"
     Site            order(20..21,24..25,28,60,128..129,131..133,136,157,
                     160..161,164,278,281..282,285..287,290,335,339,388..389,
                     393,397,506,509..510,513..514,517)
                     /site_type="other"
                     /note="putative chemical substrate binding pocket
                     [chemical binding]"
                     /db_xref="CDD:340871"
     CDS             1..567
                     /gene="SLC45A3"
                     /coded_by="XM_041470522.1:115..1818"
                     /db_xref="GeneID:121355246"
ORIGIN      
        1 msfqsrrtql llvnsltfgl evclaagity vpplllevgv eekfmtmvlg igpvlglvfv
       61 pligsasdhw hssygrrrpf iwvlclgvll slfviphass laslcalnpr pleiaflivg
      121 iglldfcgqv cftplealls dlfqepdncr qafsvyafmv slggcigyll paidwaflap
      181 ylggqqsclf sllaliflgc alatlfvtee aaqgdvaggp apkdasaraa lccwrrgpca
      241 pqgrrllqag rklclllprl hglccrvpsa irrlfvaelc swmalmtfml fytdfvgegl
      301 yhgvprakpg tearrhydeg vrmgslglfl qcitsiffst imdrlvkhfg travylasvv
      361 ffpgaafvmc lshsvtvvti saaltgftfs alqilpytla slyhhdkqvf lhkfkrkeee
      421 dsalldkksa fskgllssqk lsyqnghags lfssssspsp sssspssppa vsssalcvss
      481 scdvslrimv gepelgapgr gicldlaild safllsqvvp slfmgsivqf tqsvtaymvs
      541 aaglglvaiy fatkvvfdka dmakcsv
//
LOCUS       XP_041326458            1005 aa            linear   VRT 06-MAY-2021
DEFINITION  dual serine/threonine and tyrosine protein kinase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326458
VERSION     XP_041326458.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470524.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1005
                     /product="dual serine/threonine and tyrosine protein
                     kinase"
                     /calculated_mol_wt=111411
     Region          727..988
                     /region_name="PKc_Dusty"
                     /note="Catalytic domain of the Dual-specificity Protein
                     Kinase, Dusty; cd13975"
                     /db_xref="CDD:270877"
     Site            order(734..738,742,755,757,787,810..813,816,818,853,855,
                     857..858,860,871,874,887..890)
                     /site_type="active"
                     /db_xref="CDD:270877"
     Site            order(734..738,742,755,757,787,810..813,816,853,855,
                     857..858,860,871)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270877"
     Site            order(738,816,818,853,855,857,874,887..890)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270877"
     Site            870..890
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270877"
     CDS             1..1005
                     /gene="DSTYK"
                     /coded_by="XM_041470524.1:109..3126"
                     /db_xref="GeneID:121355247"
ORIGIN      
        1 megeeapswr gpggavrelc rsfghynrhl arlqhnlret krffrdvkfs qghpfasapa
       61 gdgprpawdg dggpgdggps pvsfprheee qlqrsvswrp cllilgqncr akgrllntll
      121 gqellptpgt gtkellptag ttellptpgt gtkellpspg agtkellpaa gavteellpt
      181 pgavtkdllp gagtaellpt lgtgteellp gtgteellpt pgagtgteel lptpgtgtgt
      241 eercrrrrvr fthgarprls lalpgqyelv qalvahsghw dtipeqdlqv pgdaedpaqr
      301 vaelevvlpc allkevdivv apcrsfqsae atlaefvnqv lpvvtfaise pqlspsdqae
      361 lreikqkfsl pifflripea sselsspktp tkdksplhlq lldleylsps spcgcgvpgs
      421 smlveqlekl rllssfsrqv lqqhlveaat rlsevhgrcl nifinqafdm qrdlqitpkr
      481 leytrrkene lyeslmgian rkqeemkemi vdtlgnmkee lledaasmef rdiiipesge
      541 pvsskdikrc iqqiqeliis rlnqavankl issvdylres fvgtlerclk sleeswegsv
      601 hpprglekpr egsvhitsny lkqiiqritw vsppaitsdw krkvaqdaie slsasklaks
      661 icsqfrtrln ssheafaasl rqledghsgr lertedlwlr vrkehaprla rlslesrslq
      721 dvllhgkpkl grelgrgqyg vvylcdswgg hfpcalksvv ppdekhwndl alefhymrsl
      781 qsherlvhlh gsvidygygg gssiavllim erlhrdlytg lkaglelepr lqialdvveg
      841 irylhsqglv hrdiklknvl ldkknrakit dlgfckpeam msgsivgtpi hmapelftgk
      901 ydnsvdvyaf gilfwylcsg hvklpeafer caskdhlwnn vrrgvrperl pvfdeecwql
      961 meacwdgdss qrpllgivqp mlqgimdrlc raasehpnkg lddst
//
LOCUS       XP_041326459             486 aa            linear   VRT 06-MAY-2021
DEFINITION  retinoblastoma-binding protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326459
VERSION     XP_041326459.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470525.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..486
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..486
                     /product="retinoblastoma-binding protein 5"
                     /calculated_mol_wt=53521
     Region          29..67
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <31..317
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          68..111
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          150..186
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          197..242
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          250..287
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          294..317
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..486
                     /gene="RBBP5"
                     /coded_by="XM_041470525.1:205..1665"
                     /db_xref="GeneID:121355248"
ORIGIN      
        1 mnlellesfg qnypeeadgt ldcismaltc tfnrwgtlla vgcndgrivi wdfltrgiak
       61 iisalallnw srdghklvsa stdnivsqwd vlsgdcdqrf rfpspilkvq yhprdqnrvl
      121 vcpmksapvm ltlsdskhvv lpvdddsdln vvasfdrrge yiytgnakgk ilvlktdtqd
      181 lvasfrvttg tsnttaiksi efarkgscfl intadriirv ydgreiltcg rdgepepmqk
      241 lqdlvnrtpw kkccfsgdge yivagsarqh alyiweksig nlvkilhgtr gellldvawh
      301 pvrpiiasis sgvvsiwaqn qvenwsafap dfkeldenve yeeresefdi ededksepeq
      361 tgadaaedee vdvtsvdpia afcsrcwalq isefpltpnp qfhpnppqfp paevhpllgv
      421 kgdgkskkkq agrpkgskgk dkdspfkpkl ykgdrgslpl egaakgkvqa elgqpltagg
      481 aisell
//
LOCUS       XP_041326460             275 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 81 [Pyrgilauda ruficollis].
ACCESSION   XP_041326460
VERSION     XP_041326460.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470526.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="transmembrane protein 81"
                     /calculated_mol_wt=30034
     Region          102..169
                     /region_name="Ig_3"
                     /note="Immunoglobulin domain; pfam13927"
                     /db_xref="CDD:464046"
     CDS             1..275
                     /gene="TMEM81"
                     /coded_by="XM_041470526.1:82..909"
                     /db_xref="GeneID:121355249"
ORIGIN      
        1 meqspivvil lcalcipaml psdselpsel gsgldlppga esiplglkpm vavnstpcsv
       61 tcglgvkqeq lcevspagqr rncslvrsrc ltdwicglrh fsvpegkpfk lvclspdaas
      121 legpnfgytw rfarglittn dllfhpfrnp spslsfspal eshsgtyrcd vqvlssfklv
      181 kriyfglrvi pkdlvdldfe ksltweqqlv angeeppgnv tgapeqqesf wkkqwfyeav
      241 lgigsgvimg ilfslglccl gricrkraar emned
//
LOCUS       XP_041326461             340 aa            linear   VRT 06-MAY-2021
DEFINITION  renin [Pyrgilauda ruficollis].
ACCESSION   XP_041326461
VERSION     XP_041326461.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470527.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..340
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..340
                     /product="renin"
                     /calculated_mol_wt=36651
     Region          34..>52
                     /region_name="A1_Propeptide"
                     /note="A1 Propeptide; pfam07966"
                     /db_xref="CDD:462326"
     Region          81..339
                     /region_name="pepsin_retropepsin_like"
                     /note="Cellular and retroviral pepsin-like aspartate
                     proteases; cl11403"
                     /db_xref="CDD:472175"
     Site            order(107,109,111,149..151)
                     /site_type="active"
                     /note="inhibitor binding site [active]"
                     /db_xref="CDD:133154"
     Site            107..109
                     /site_type="active"
                     /note="catalytic motif [active]"
                     /db_xref="CDD:133154"
     Site            107
                     /site_type="active"
                     /note="Catalytic residue [active]"
                     /db_xref="CDD:133154"
     Site            order(149..152,156..159)
                     /site_type="active"
                     /note="Active site flap [active]"
                     /db_xref="CDD:133154"
     CDS             1..340
                     /gene="REN"
                     /coded_by="XM_041470527.1:1..1023"
                     /db_xref="GeneID:121355250"
ORIGIN      
        1 mavapsrrlq rcllllavtw gatfvpspaq alqrialrrm psirqtlqem gvkvrevfpe
       61 lrratrgggd gprngtaptl ltnyldtqyf geisigtpaq tfkvvfdtgs anlwvpsykc
      121 splysacvsh srydssksrt yiangtgfai rygtgsvkgi lsqdivmrfq aggeiilggs
      181 dpahytgdfh ylnvsrsgfw qirmkgvsvg aetlfcregc svavdtgasy itgpagpvsv
      241 lmkaigatea aegeyvvdce qvpqlpnisf hlggkvygls gpayvlrqsq ygedvcvvaf
      301 sgldipppag plwilgatfi ghyytkfdrr hnrigfatar
//
LOCUS       XP_041326462             454 aa            linear   VRT 06-MAY-2021
DEFINITION  ethanolamine kinase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326462
VERSION     XP_041326462.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470528.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..454
                     /product="ethanolamine kinase 2"
                     /calculated_mol_wt=49693
     Region          138..442
                     /region_name="ETNK_euk"
                     /note="Euykaryotic Ethanolamine kinase; cd05157"
                     /db_xref="CDD:270706"
     Site            order(144,146,148..149,151,165,167,196,208..211,213..215,
                     309,311,313..314,316,327..328,331,347,352)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:270706"
     Site            order(144,149,151,165,167,196,208..211,213..215,313,316,
                     327..328)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270706"
     Site            order(146,148,309,311,314,331,347,352)
                     /site_type="other"
                     /note="putative substrate binding site [chemical binding]"
                     /db_xref="CDD:270706"
     Site            order(278..281,284..285,291,295,406,430..431,434,437..438,
                     441..442)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:270706"
     CDS             1..454
                     /gene="ETNK2"
                     /coded_by="XM_041470528.1:1..1365"
                     /db_xref="GeneID:121355251"
ORIGIN      
        1 mdplpaapvp dadplpsvpv gcaspapgag agagaaaaag eaggrragds wlpngggssp
       61 rppaprsprh mgrgsgsael amaapparcp dcpgperggg ggtpavphlg iavdegdvlp
      121 galrivrrlr pawdpaavkt klftdgitnk lvacymdegm vdallvrvyg rktellvdre
      181 telrnfqvlr ahgcapdlyc sfqnglcyqf lpgialgpdh vrdphifrlv aremarvhai
      241 hangslprpm lwqklhkyls lvktelspkv snaslprdvp spealeqela wmeetlsqlg
      301 spvvlchndl lckniiydrt rervrfidye ytgynyqafd ignhfnefag vkevdyglyp
      361 gketqlqwlh sylqaykelt qghpgdsqvs qeeletlyvq vnkfslashf lwacwgliqd
      421 kystidfnfl ryaklrfkqy fkmkpvvtal qvpk
//
LOCUS       XP_041326463            1129 aa            linear   VRT 06-MAY-2021
DEFINITION  plasma membrane calcium-transporting ATPase 4 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326463
VERSION     XP_041326463.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470529.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1129
                     /product="plasma membrane calcium-transporting ATPase 4"
                     /calculated_mol_wt=124553
     Region          12..948
                     /region_name="ATPase-IIB_Ca"
                     /note="plasma-membrane calcium-translocating P-type
                     ATPase; TIGR01517"
                     /db_xref="CDD:273668"
     Region          987..1063
                     /region_name="ATP_Ca_trans_C"
                     /note="Plasma membrane calcium transporter ATPase C
                     terminal; pfam12424"
                     /db_xref="CDD:463575"
     CDS             1..1129
                     /gene="ATP2B4"
                     /coded_by="XM_041470529.1:433..3822"
                     /db_xref="GeneID:121355252"
ORIGIN      
        1 mtnnvadhhp gnsvaegnhe gdfgcslvel rnlmelrsae avarindsyg gvqnvckrlk
       61 tspveglsgn ptdlekrrqv fgqnfippkk aktflqlvwe alqdvtliil eiaaiislgl
      121 sfyhppggdn elcgqssggv edegesqagw iegaailfsv iivvlvtafn dwskekqfrg
      181 lqsrieqeqk ftvirkgqvi qipvaeivvg diaqikygdl lpadgiliqg ndlkidessl
      241 tgesdqvkks mdkdpmllsg thvmegsgrm vvtavginsq tgiiftllga gegdeekkvk
      301 kgkksgapen rnkaktqdgv aleiqplksq egveneekek kkvkvpkkek svlqgkltrl
      361 avqigkagli msaitviilv lyfvidtfgv qkrpwlaect piyiqyfvkf fiigvtvlvv
      421 avpeglplav tislaysvkk mmkdnnlvrh ldacetmgna taicsdktgt lttnrmtvvq
      481 ayvgdthyrq ipdpeailpk ildlivhgva insaytskil ppekegglpr qvgnktecal
      541 lgfvldlkqd yqavrnevpe eklykvytfn svrksmstvl rssgggfrmy skgaseiilr
      601 kctkildksg eprvfkvkdr demvkkviep machglrtic lafrdfpaea epdwdsenei
      661 lsdltciavv giedpvrpev tnptcpalfp alllllragi agtdvakeas diiltddnfs
      721 sivkavmwgr nvydsiskfl qfqltvnvva vivaftgaci tqdsplkavq mlwvnlimdt
      781 faslalatep pseslllrkp ygrnkplisr tmmknilgha vyqltiiftl lfagekffdi
      841 dsgrnaplhs pptehytivf ntfvmmqlfn einarkihge rnvfegiyrn pifctvvlgt
      901 ffaqiiivef ggkpfscsgl tlsqwfwcif igvgellwgq lictvptshl kflkeaghgi
      961 tkeeipeeel pedvdeidha emelrrgqil wfrglnriqt qmdvvytfqt gasslqgalr
     1021 rqpsivsqhh dikvvnafrs slyeglekpe srssihnfmt hpefileede prtpfldgte
     1081 depepdglqk rgggslggst alnrnnnavd sefsfpepgs pfhsletsv
//
LOCUS       XP_041326464             376 aa            linear   VRT 06-MAY-2021
DEFINITION  opticin [Pyrgilauda ruficollis].
ACCESSION   XP_041326464
VERSION     XP_041326464.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470530.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 27% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..376
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..376
                     /product="opticin"
                     /calculated_mol_wt=41177
     Region          154..175
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          <169..>274
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          176..199
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          200..219
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          220..245
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          246..259
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..376
                     /gene="OPTC"
                     /coded_by="XM_041470530.1:1..1131"
                     /db_xref="GeneID:121355253"
ORIGIN      
        1 mcplgwlgva slclgtlwav pakerrkvek pkaeltlyen ldldsydvtl dnygdildls
       61 nyeelydygd lvpkievgtl aprpkdpktl pelgettagt pnlqppsgag pvppapipgq
      121 glpscllclc lgssvycdda gleripalpp dtaylyarfn riaavragdf rgleklkrid
      181 lssnsiswad adafrwlpsl qelllpenrl talpelprsi vrldarlnri asaglrpeaf
      241 rdlkqlqflh lsdnqldfip vplpeslrsl hlqghagdtr agqgapletc pgclgriqal
      301 pppaglrers ellrvtasrl trplvtkpvn vavapglava pgqrrqregl hrpcwlsepr
      361 sllmitihdy rsswir
//
LOCUS       XP_041326465             372 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041326465
VERSION     XP_041326465.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470531.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="Krueppel-like factor 15"
                     /calculated_mol_wt=38853
     Region          <80..278
                     /region_name="KLF15_N"
                     /note="N-terminal domain of Kruppel-like factor 15;
                     cd21580"
                     /db_xref="CDD:410206"
     Region          <269..359
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..372
                     /gene="LOC121355255"
                     /coded_by="XM_041470531.1:586..1704"
                     /db_xref="GeneID:121355255"
ORIGIN      
        1 mvsvscqdll pslpgpslle slasalqcrm ppsllpghgg drtcghpegs ghvlaggtgh
       61 aepvplpsvk eeppkaqlte aqlrlpdfcl sqdfiptlee ieeflrekae lprdeagdph
      121 ptgwkveska elgsgaqpip raheggaghv peavgtaagd qgqaadnqvv aagdqvvaag
      181 dqvlaagsip vvlqlqplpm dsvtppaqpg gvrvaqllis lqspnlpvlp qlqppgttld
      241 qkyvriaplp vapgpgdvqg aeaapgggqq gppaplrahr cshpgcgkvy sksshlkahf
      301 rrhtgekpys cawpncgwrf srsdelsrhk rshsglkpyp cpacekrfar sdhlakhlri
      361 hggqpcspga lp
//
LOCUS       XP_041326466             372 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041326466
VERSION     XP_041326466.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470532.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="Krueppel-like factor 15"
                     /calculated_mol_wt=38853
     Region          <80..278
                     /region_name="KLF15_N"
                     /note="N-terminal domain of Kruppel-like factor 15;
                     cd21580"
                     /db_xref="CDD:410206"
     Region          <269..359
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..372
                     /gene="LOC121355255"
                     /coded_by="XM_041470532.1:118..1236"
                     /db_xref="GeneID:121355255"
ORIGIN      
        1 mvsvscqdll pslpgpslle slasalqcrm ppsllpghgg drtcghpegs ghvlaggtgh
       61 aepvplpsvk eeppkaqlte aqlrlpdfcl sqdfiptlee ieeflrekae lprdeagdph
      121 ptgwkveska elgsgaqpip raheggaghv peavgtaagd qgqaadnqvv aagdqvvaag
      181 dqvlaagsip vvlqlqplpm dsvtppaqpg gvrvaqllis lqspnlpvlp qlqppgttld
      241 qkyvriaplp vapgpgdvqg aeaapgggqq gppaplrahr cshpgcgkvy sksshlkahf
      301 rrhtgekpys cawpncgwrf srsdelsrhk rshsglkpyp cpacekrfar sdhlakhlri
      361 hggqpcspga lp
//
LOCUS       XP_041326467             372 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041326467
VERSION     XP_041326467.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470533.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523789.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..372
                     /product="Krueppel-like factor 15"
                     /calculated_mol_wt=38853
     Region          <80..278
                     /region_name="KLF15_N"
                     /note="N-terminal domain of Kruppel-like factor 15;
                     cd21580"
                     /db_xref="CDD:410206"
     Region          <269..359
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          281..303
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(288,290,292,294..295,298..299,302,318,320,324..325,
                     328..329,332,346,348,350,352..353,356..357,360)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          311..333
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          325..350
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          341..361
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..372
                     /gene="LOC121355255"
                     /coded_by="XM_041470533.1:1441..2559"
                     /db_xref="GeneID:121355255"
ORIGIN      
        1 mvsvscqdll pslpgpslle slasalqcrm ppsllpghgg drtcghpegs ghvlaggtgh
       61 aepvplpsvk eeppkaqlte aqlrlpdfcl sqdfiptlee ieeflrekae lprdeagdph
      121 ptgwkveska elgsgaqpip raheggaghv peavgtaagd qgqaadnqvv aagdqvvaag
      181 dqvlaagsip vvlqlqplpm dsvtppaqpg gvrvaqllis lqspnlpvlp qlqppgttld
      241 qkyvriaplp vapgpgdvqg aeaapgggqq gppaplrahr cshpgcgkvy sksshlkahf
      301 rrhtgekpys cawpncgwrf srsdelsrhk rshsglkpyp cpacekrfar sdhlakhlri
      361 hggqpcspga lp
//
LOCUS       XP_041326468             278 aa            linear   VRT 06-MAY-2021
DEFINITION  fasciculation and elongation protein zeta-1-like, partial
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326468
VERSION     XP_041326468.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470534.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523791.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the amino end.
FEATURES             Location/Qualifiers
     source          1..278
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         <1..278
                     /product="fasciculation and elongation protein
                     zeta-1-like"
     Region          <29..62
                     /region_name="FEZ"
                     /note="FEZ-like protein; pfam07763"
                     /db_xref="CDD:462257"
     CDS             1..278
                     /gene="LOC121355259"
                     /coded_by="XM_041470534.1:<1..837"
                     /db_xref="GeneID:121355259"
ORIGIN      
        1 alsraglgrl sarellaaag raeaasrals aelvaqlarr delafekevk tafigallav
       61 qgeqreqrea arrrrrdkgl slqgarserg snmprkrfsm egissilhsg lrqtfgpttn
      121 ekqylntvip yekkgsppsv edlqmltnil famkegnekv ptlltdyilk gtcsplpalg
      181 tprasstqll cssvpppqip lhppasplhp lcilcpsllq phssllhllc ileesqinpv
      241 afllhpscis aassthpsgv ldaspahpsg ilctalls
//
LOCUS       XP_041326469             495 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal cochleal [Pyrgilauda ruficollis].
ACCESSION   XP_041326469
VERSION     XP_041326469.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470535.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..495
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..495
                     /product="keratin, type II cytoskeletal cochleal"
                     /calculated_mol_wt=53634
     Region          7..108
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          111..422
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..495
                     /gene="LOC121355260"
                     /coded_by="XM_041470535.1:449..1936"
                     /db_xref="GeneID:121355260"
ORIGIN      
        1 msrsvtfssr saagpalsqv rvstvsssrs sglgraggfg saslynlgsa skrislgggs
       61 sfsvrsgygy ggagfggsfs pggiqevtvn qslltplnle idpsiqrvrk eekeqiktln
      121 nkfasfidkv rfleqqnkml etkwsllqeq kttrsniapm fetyisnlrr qldglladkg
      181 rlegelknmq dlvedfktky edeinkrtaa enefvvlkkd vdaaymnkve leakvdaltd
      241 einflrafhe aelnelqaqi sdtsvvlsmd nnrnldlnsi iaevkaqyee ianrsraeae
      301 swyqskyeal qvtagkhgdd lrntkneite inraiqriqg eienakaqra kleaavaeae
      361 ergemalkda rakleeleaa lqkakadmar qlreyqelmn vklaldieia tyrkllegee
      421 srlagdgvgn vnisvvsssg gggyssssgf lgagigggls lgsgmgsgal gfssggstks
      481 ytitttsssr rsvrk
//
LOCUS       XP_041326470             479 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 80 [Pyrgilauda ruficollis].
ACCESSION   XP_041326470
VERSION     XP_041326470.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470536.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..479
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..479
                     /product="keratin, type II cytoskeletal 80"
                     /calculated_mol_wt=52774
     Region          92..404
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..479
                     /gene="KRT80"
                     /coded_by="XM_041470536.1:81..1520"
                     /db_xref="GeneID:121355262"
ORIGIN      
        1 mtnpssafss gslcsgeaaa gmsrgraags psperrspdg gasdgrgsag sdgcgslggl
       61 rcsayspfpl egrlrppvrl didtefqavr qqekedikvl nnqfvtliek vqsleqqnki
      121 lttrwnflkd qdnshsdsdi kaiyeqyvsk mnqemkalny eqenlesela kvlstmdafr
      181 skyedeirlc sgmeftfmel kkdldvstlh rtelevklkg lqellelkkt iyeqeleell
      241 teikdisvvl gidscsrpdl grivedvraq yealalrswe eaealtrrkl tdsssqpgsf
      301 gghlldsrre iadlniriqk lrscivsqks qclyleehir eageqgegtl rdakakvagl
      361 eaalqrsreh mahlvreyqe lmniklaldv eiltyrklve geensmeqpi ptvisavhsr
      421 pkplsastlr nswlfargsg dtepsgggpg spgraqdlpg tpgtgtrpkf ssgalgecs
//
LOCUS       XP_041326471             531 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 6A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326471
VERSION     XP_041326471.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470537.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..531
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..531
                     /product="keratin, type II cytoskeletal 6A-like"
                     /calculated_mol_wt=57614
     Region          14..141
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          145..457
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..531
                     /gene="LOC121355263"
                     /coded_by="XM_041470537.1:7..1602"
                     /db_xref="GeneID:121355263"
ORIGIN      
        1 msrqctvrsq arrnfsassa ffpnassssl clrpapqags crattgygrf tggfgsrslh
       61 nlgecqrisv agrggvsygp agfgagtgis ygfggavagp fgigggpgfp avpvggihev
      121 tvnqsllkpl nlkvdpniqr irkdeknqiq tlnnkfasfi dkvrfleqqn kvletkwall
      181 qeqgnktvrm nieplfetyl nnlrrhlssl mtekenlgge lskmksiaed fknkyeeeln
      241 khtdienefv tlkkeadtay lektdlqarl dslteeidfl ralyeaelsq vqskisdtsv
      301 iltmdnnrsl dmegiiaevk aqyedianrs raeaeswyqs rfeemqatag rhgddlrntk
      361 qeiselnrhi qrlrseidsv kkqvtglqts iadaeqrges alkdarakle gletalqkak
      421 adlarqlrey qelmnvklal dieivtyrkl legeecrlsg egagsvnvsv ttsgmgygss
      481 nclsssggav ggvcagmgig svsgsgygtg gscmvggsss sfnsistrrc y
//
LOCUS       XP_041326472             709 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 6A-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326472
VERSION     XP_041326472.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470538.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="keratin, type II cytoskeletal 6A-like"
                     /calculated_mol_wt=70513
     Region          15..217
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          221..535
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..709
                     /gene="LOC121355265"
                     /coded_by="XM_041470538.1:1..2130"
                     /db_xref="GeneID:121355265"
ORIGIN      
        1 mnrtlsmrag gggrsysaas aiipssnrag fssvsvarsg gggggfgrli ggggggssgg
       61 gggfgsrsly nlggskrisi gvgssfraaf gsgaagsglg gggggggcgl gsggaggfgg
      121 ggaggglglg lggggggfgf gggagglgyg gghggggglg fgglgglggf paglgggrnp
      181 pgfsggpsgv gtiqevtvnq sllaplnlei dpniqqvrkd ekeqiktlnn kfasfidkvr
      241 fleqqnkvle tkwtllqeqg qknnssksnl dplfeayinn lrrqlanlln ergrmdgelk
      301 nmqdlvedfk nkyeeeinrr taaenefvvl kkdvdaaymn kveleakvda lsdelnflra
      361 lyeaelaqls aqvsdtavil smdnnrdldl ssiiaevkaq yedianrsra eaeawyqtkf
      421 eelqatagkh gddlrntkge iselnrliqr irseientrn qcatlqtaig dseergemal
      481 kdakakmidl edalqkakad marqlreyqe lmnvklaldi eiatyrklle geesrlsgeg
      541 lnpisysvis sssgisggtg lgggfgglsl sgggggsgfg lgggggssfg lgggvgngfg
      601 lgggggssfg lgsggggggg gsysfgsggg lglgaggglg ggfgggsglg sagsyshagg
      661 gssalstsgg nfssgsakgt npgvkivskt ssskksiksq slknatepe
//
LOCUS       XP_041326473             620 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326473
VERSION     XP_041326473.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470539.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..620
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..620
                     /product="keratin, type II cytoskeletal 4-like"
                     /calculated_mol_wt=66426
     Region          16..161
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          165..477
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..620
                     /gene="LOC121355266"
                     /coded_by="XM_041470539.1:1..1863"
                     /db_xref="GeneID:121355266"
ORIGIN      
        1 msrqcytsgs ilgrrgfssa savcglgran sssasvcqtv grrcgiggfs srsvcdlgrg
       61 qrisfggscr sgvyggagvg rcgvaygggr fgtvvgfgnc asfgglgsyr glgdgvavgg
      121 ygggisiglg ggrsegirgv sihpellkpl cvgvdpeecq vrthekeqik nlnnqfacfi
      181 dkvrlleqqn kvlttkwell qqyvlpasrr nlepvfenfi cnlrkqlecv mgererlene
      241 erclrdlvqe fkckyedein krtaaenefv vlkkdvdcly ltkeelevrv gllrqqlefl
      301 kciyaeeraq ldcqlcdtsv ivqmdnsrdl dmegiiksve ccyeeiaqks kaeveafyqt
      361 rleelhssrg kfcddlrnnq seiaelnrmi qklqcesdnv kkqisalqta icdaeqrgdc
      421 alkdarqklv dlqtalqqak dkmacllrdy qellnvklal dieiatyrtl legeesrict
      481 gnpvsvavvs gggtvgecrs lsgiggkctv ktgaagaglg mvssfgnagf strsvdcvpk
      541 vgagfgarsa vscvgrevlt gvdgvqcaag mgnlgnlgnl gnvvcagveq cgpgavlipg
      601 tpgvcgnrfs tavrvvrttr
//
LOCUS       XP_041326474             614 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 4-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326474
VERSION     XP_041326474.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470540.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..614
                     /product="keratin, type II cytoskeletal 4-like"
                     /calculated_mol_wt=67539
     Region          12..126
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          134..447
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..614
                     /gene="LOC121355267"
                     /coded_by="XM_041470540.1:1..1845"
                     /db_xref="GeneID:121355267"
ORIGIN      
        1 msrqaptvrs vlgrrgfssa seicgrsyaa sasqpvrcga yssrsvcnlg gsrrisyvng
       61 scgtgcfgem gfggmgygng gggriglcgp rgysivrgyp erkadgiqgi ciderllkpl
      121 cvgvdplehe ircqekeqik tlntqfacfi dkvrfleqqn kvletkwgll qqyvlpkkgk
      181 nlelyfenyi cdlrkrldcl lcekqklgse ecatsqlvee fkckyeeein rrttvenefv
      241 alkkdadcif lnkeelevkv dllrrqlell kcvfeeeraq vdrqlcdtsv ivkmdnnrdl
      301 dmesiiknve cwyqeiaqks keevdafyqn rfqelqdkrg kychdlqsnk ceiseltrmi
      361 qklqcelesv kkqvsclqts icdveqrgdc alkdarekhv elqnalqkak delacmlrdy
      421 qellnvklal dieiatyktl legeesricv gnpvsvsvvs sgynipddcg mmangavcgy
      481 gslgrragrh ssqtggfssr sagihpkrvl ssvakqcipe vfcqaggvsc kaggfssrsg
      541 gypartvvsa gsagmnarmg pcqagqvlsf gnqgcvirql agppvvvsss pevvgcnngv
      601 vgnfgvvrdp cvvp
//
LOCUS       XP_041326475            1067 aa            linear   VRT 06-MAY-2021
DEFINITION  electroneutral sodium bicarbonate exchanger 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326475
VERSION     XP_041326475.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470541.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1067
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1067
                     /product="electroneutral sodium bicarbonate exchanger 1"
                     /calculated_mol_wt=120080
     Region          112..997
                     /region_name="Band_3_cyto"
                     /note="Band 3 cytoplasmic domain; cl26877"
                     /db_xref="CDD:452680"
     CDS             1..1067
                     /gene="SLC4A8"
                     /coded_by="XM_041470541.1:43..3246"
                     /db_xref="GeneID:121355268"
ORIGIN      
        1 mpagsnepdg ilsyqrhdee avidqgrtsn vvnihyekee leghrtlyvg vrmplvrqsh
       61 rhhrahsqkh rkrerekepv paeqgyhytp sqrvqfilgt eedeqhvphd lfteldeicv
      121 kegedaewke tarwlkfeed vedggerwsk pyvatlslhs lfelrsciin gtvlldvrat
      181 svediadlil aqqelsaefd ertrakvrev llkkhhhqne rkrnnllpiv lsfsslpaqt
      241 ltphpsptta eakngvtpet samdlskael hfmkkipsga easnvlvgel dflhqplvaf
      301 vrltpavlls gmtevpiptr flfvllgpgg kahqyheigr smattmtdev fhdvaykakd
      361 radlvagide fldqvtvlpp gewdpsirie ppknvpsqek rkmpgaldes sshskpekhs
      421 gpelertgrl fgglvldvkr kapwfwsdfr dglslqclas flflycacms pvitfggllg
      481 eathghisam esllgasmtg vvyslfagqp ltilgstgpv lvfekilykf ckeytlsyls
      541 lrtciglwta ffcvvlvatd asclvcyitr fteeafasli ciifiyeale klshlretfp
      601 vhmhskldll tiyyckcepp ahpsnetlqf wqsngisvsg itwgnltvte crslhgefhg
      661 pacghngpya pnvlfwccil ffstfvlssl lkkfktsryf ptrvrstvsd favfltivim
      721 vlidlgigip spklhvphmf kptrddrgwl inpigpnpww tvlaalipal lctilifmdq
      781 qitavivnrk ehrlkkgcgy hldlfmvavm lgvcsvmglp wfvaatvlsi thvnslkves
      841 dcsapgeqpk flgireqrvt glmifvlmgc svfftsvlkf ipmpvlygvf lymgvsslrg
      901 iqffdrlklf wmpakhqpdf iylrhvplrk vhlftliqll clvllwaika sraaiifpmm
      961 vlalvfvrkv mdfcfskrel sflddlmpes kkkklddakn eakeeeesqk mmeaaaansv
     1021 qlklgktsrv dtpkpssdra dpseinisde mskttvwkal tmntetl
//
LOCUS       XP_041326476             276 aa            linear   VRT 06-MAY-2021
DEFINITION  chymotrypsin-like elastase family member 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326476
VERSION     XP_041326476.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470542.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="chymotrypsin-like elastase family member 1
                     isoform X1"
                     /calculated_mol_wt=29386
     Region          49..272
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(81,129,224)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(218,243,245)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..276
                     /gene="CELA1"
                     /coded_by="XM_041470542.1:558..1388"
                     /db_xref="GeneID:121355270"
ORIGIN      
        1 macsgwsaap rrartpgptr wvlpgshgrc rgspragspr saparvsppa qislqyysgg
       61 swhhtcggsl ihrnwvmtaa hcvnnnmnyr vvagehnlnt negseqvfsv srivvhpywn
      121 snnvaagydi alfrlsspat lnsavqlavl pqegtilpnn yacyitgwgl trsngqlssv
      181 llqaylpvvd yqicssasyw gstvkntmvc aggdgvrsgc qgdsggplhc avngqyqvhg
      241 vtsfvssqgc nvarkptvft rvsayiswin sviaqn
//
LOCUS       XP_041326477             276 aa            linear   VRT 06-MAY-2021
DEFINITION  chymotrypsin-like elastase family member 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326477
VERSION     XP_041326477.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470543.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..276
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..276
                     /product="chymotrypsin-like elastase family member 1
                     isoform X1"
                     /calculated_mol_wt=29386
     Region          49..272
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            order(81,129,224)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(218,243,245)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..276
                     /gene="CELA1"
                     /coded_by="XM_041470543.1:461..1291"
                     /db_xref="GeneID:121355270"
ORIGIN      
        1 macsgwsaap rrartpgptr wvlpgshgrc rgspragspr saparvsppa qislqyysgg
       61 swhhtcggsl ihrnwvmtaa hcvnnnmnyr vvagehnlnt negseqvfsv srivvhpywn
      121 snnvaagydi alfrlsspat lnsavqlavl pqegtilpnn yacyitgwgl trsngqlssv
      181 llqaylpvvd yqicssasyw gstvkntmvc aggdgvrsgc qgdsggplhc avngqyqvhg
      241 vtsfvssqgc nvarkptvft rvsayiswin sviaqn
//
LOCUS       XP_041326478             267 aa            linear   VRT 06-MAY-2021
DEFINITION  chymotrypsin-like elastase family member 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326478
VERSION     XP_041326478.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470544.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..267
                     /product="chymotrypsin-like elastase family member 1
                     isoform X2"
                     /calculated_mol_wt=28684
     Region          28..263
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            28
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(72,120,215)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(209,234,236)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..267
                     /gene="CELA1"
                     /coded_by="XM_041470544.1:394..1197"
                     /db_xref="GeneID:121355270"
ORIGIN      
        1 mmlqlvllaa lalcgrcsel dldgmqrvvg gtearshawp yqislqyysg gswhhtcggs
       61 lihrnwvmta ahcvnnnmny rvvagehnln tnegseqvfs vsrivvhpyw nsnnvaagyd
      121 ialfrlsspa tlnsavqlav lpqegtilpn nyacyitgwg ltrsngqlss vllqaylpvv
      181 dyqicssasy wgstvkntmv caggdgvrsg cqgdsggplh cavngqyqvh gvtsfvssqg
      241 cnvarkptvf trvsayiswi nsviaqn
//
LOCUS       XP_041326479             621 aa            linear   VRT 06-MAY-2021
DEFINITION  polypeptide N-acetylgalactosaminyltransferase 6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326479
VERSION     XP_041326479.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470545.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..621
                     /product="polypeptide N-acetylgalactosaminyltransferase 6"
                     /calculated_mol_wt=70567
     Region          179..484
                     /region_name="pp-GalNAc-T"
                     /note="pp-GalNAc-T initiates the formation of mucin-type
                     O-linked glycans; cd02510"
                     /db_xref="CDD:133004"
     Site            order(183..185,187,216,245,248,252,268..270,355..356,
                     378..379,381,406,409,414)
                     /site_type="active"
                     /note="ligand binding site [active]"
                     /db_xref="CDD:133004"
     Site            order(268,270,406)
                     /site_type="active"
                     /note="Mn binding site [active]"
                     /db_xref="CDD:133004"
     Region          494..621
                     /region_name="beta-trefoil_Ricin-like"
                     /note="ricin B-type lectin domain, beta-trefoil fold;
                     cl49609"
                     /db_xref="CDD:483949"
     Site            order(510..512,522,524,532..533)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467348"
     Site            order(554..555,561,563,577..578)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467348"
     Site            order(598..600,605,607,615..616)
                     /site_type="other"
                     /note="sugar binding site [chemical binding]"
                     /db_xref="CDD:467348"
     CDS             1..621
                     /gene="GALNT6"
                     /coded_by="XM_041470545.1:5..1870"
                     /db_xref="GeneID:121355271"
ORIGIN      
        1 mrlfrrryst lkvalagavf vlflfilqkd vgskepgeep wlrnivqgkd qvldlmlgav
       61 rdlrdsmprl qigapepppe plpsarsclp gvytaaelrp lmerppqdpa spgadgkafk
      121 kdrwtpeetk ekergyekhc fnafasdris lqralgpdsr ppecidqkfk rcpplpttsv
      181 vivfhneaws tllrtvysvl hssparllre vilvddastd eylkeeldry veqlqvvrvv
      241 rqrerkglit arllgasvas gevltfldah cecfhgwlep llsriaeept avvspdiati
      301 dlntfefskp vqngkqhsrg nfdwsltfgw eviparerqr rkdetfpiks ptfagglfai
      361 srsyfehigs yddqmeiwgg envemsfrvw qcggqveiip csvvghvfrs ksphtfpkgt
      421 qvisrnqvrl aevwmddyke ifyrrnqqaa qmarektfgd iterrrlrer lhcrnftwyl
      481 qnvypemfvp dltpvfygai knegtkscld vgennhggkp limypchglg gnqyfeytsq
      541 relrhnigke lclrgdagta elgecqfrgk pgrvpaseew dlaqtrlikn lasgmcltar
      601 gkhpalvpcd ltdphqlwsf t
//
LOCUS       XP_041326480             264 aa            linear   VRT 06-MAY-2021
DEFINITION  aquaporin-5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326480
VERSION     XP_041326480.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470546.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..264
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..264
                     /product="aquaporin-5"
                     /calculated_mol_wt=28332
     Region          4..220
                     /region_name="MIP"
                     /note="Major intrinsic protein; pfam00230"
                     /db_xref="CDD:395174"
     Site            order(49,67..69,180..181,184,187)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(69..71,184..186)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..264
                     /gene="AQP5"
                     /coded_by="XM_041470546.1:175..969"
                     /db_xref="GeneID:121355272"
ORIGIN      
        1 mkkeiltlaf aravfveflc tlifvfiglg salkwpsalp silqialafg laigtlvqaf
       61 ghisgahinp avtiaffvgn qisllrtlly vvaqlvgaia gagilygvtp antrgnlain
      121 alnnnitpgq alvveiiltf qlaacifast dnrrngvgsp alsiglsvtl ghlvgiyftg
      181 csmnparsfg pavvtrrfsp vhwvfwvgpi lgaclaslly fyilvpycmn msdrvaiikg
      241 tyeseeewee qreerkksme ltpp
//
LOCUS       XP_041326481             275 aa            linear   VRT 06-MAY-2021
DEFINITION  aquaporin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326481
VERSION     XP_041326481.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470547.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..275
                     /product="aquaporin-2"
                     /calculated_mol_wt=29256
     Region          4..221
                     /region_name="MIP"
                     /note="Major intrinsic protein; pfam00230"
                     /db_xref="CDD:395174"
     Site            order(50,68..70,182..183,186,189)
                     /site_type="active"
                     /note="amphipathic channel [active]"
                     /db_xref="CDD:238204"
     Site            order(70..72,186..188)
                     /site_type="other"
                     /note="Asn-Pro-Ala signature motifs"
                     /db_xref="CDD:238204"
     CDS             1..275
                     /gene="AQP2"
                     /coded_by="XM_041470547.1:1..828"
                     /db_xref="GeneID:121355273"
ORIGIN      
        1 mmwelrsiaf travlaefla tlvfvlfglg salnwpsapa pstlqialaf glaigtlvqa
       61 lghvsgahin pavtlgcllg sqlsllralf yvvaqllggv vgaailhevt pasareglal
      121 nklhnetttg qavtvelflt fqlvlcifas tderrednlg spalsiglsv avghllgiry
      181 tgcsmnpars fapavvvgdf sdhwvfwvgp ligaaaasil ynyvlfpqak slserlailk
      241 gcepeqdwae rearrrqsve lhspqtlprg msekv
//
LOCUS       XP_041326482             597 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 6A-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326482
VERSION     XP_041326482.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470548.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..597
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..597
                     /product="keratin, type II cytoskeletal 6A-like isoform
                     X1"
                     /calculated_mol_wt=62172
     Region          <137..167
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          170..483
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..597
                     /gene="LOC121355274"
                     /coded_by="XM_041470548.1:1..1794"
                     /db_xref="GeneID:121355274"
ORIGIN      
        1 msrisfrsst gggmrgfssg saivggsggg trssfssvsv srvgggragg gggfgagggf
       61 gsrslynlgg skrisyssvg gglrsgaggg ysfglgyggg agfglggagg gggyglgsgf
      121 glggpgfggr ggsgfpvcpp ggihevtvnq sllaplkldi dpeiqkvrtq ereqiktlnn
      181 kfasfidkvr fleqqnkvle tkwtllqeqg htvtrkslep ifeayinnlr rqldslmger
      241 grldselrsm qdmvedfknk yedeinrrtg aenefvvlkk dvdgaymnkv elqgkadala
      301 eeinflraly eaelsqmqqq vsdtsvvlsm dnnrnldlns iiaevkaqye dianrsraea
      361 eawyqnkyee lqvsagrhgd dlrntkmeis einrmvqrlr neidsvkkqc anlqaaiaea
      421 eergemalkd akaklteled alqkakadla rqlreyqelm nvklaldiei atyrkllege
      481 esrlagegvg avsvsvvsss sgmgygggsc lglggglgmg ggggsssytm sssgfgggsg
      541 gfggsggfgg gsggfsggls yggsssfssg ssrgvststg gsvrivsktt tskktir
//
LOCUS       XP_041326483             588 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 6A-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326483
VERSION     XP_041326483.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470549.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..588
                     /product="keratin, type II cytoskeletal 6A-like isoform
                     X2"
                     /calculated_mol_wt=61509
     Region          <137..167
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          170..483
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..588
                     /gene="LOC121355274"
                     /coded_by="XM_041470549.1:1..1767"
                     /db_xref="GeneID:121355274"
ORIGIN      
        1 msrisfrsst gggmrgfssg saivggsggg trssfssvsv srvgggragg gggfgagggf
       61 gsrslynlgg skrisyssvg gglrsgaggg ysfglgyggg agfglggagg gggyglgsgf
      121 glggpgfggr ggsgfpvcpp ggihevtvnq sllaplkldi dpeiqkvrtq ereqiktlnn
      181 kfasfidkvr fleqqnkvle tkwtllqeqg htvtrkslep ifeayinnlr rqldslmger
      241 grldselrsm qdmvedfknk yedeinrrtg aenefvvlkk dvdgaymnkv elqgkadala
      301 eeinflraly eaelsqmqqq vsdtsvvlsm dnnrnldlns iiaevkaqye dianrsraea
      361 eawyqnkyee lqvsagrhgd dlrntkmeis einrmvqrlr neidsvkkqc anlqaaiaea
      421 eergemalkd akaklteled alqkakadla rqlreyqelm nvklaldiei atyrkllege
      481 esrlagegvg avsvsvvsss sgmgygggsc lglggglgmg ggggsssytm sssgfgggfg
      541 ggsggfsggl syggsssfss gssrgvstst ggsvrivskt ttskktir
//
LOCUS       XP_041326484             534 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 75-like isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326484
VERSION     XP_041326484.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470550.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..534
                     /product="keratin, type II cytoskeletal 75-like isoform
                     X1"
                     /calculated_mol_wt=58252
     Region          15..143
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          146..459
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..534
                     /gene="LOC121355276"
                     /coded_by="XM_041470550.1:1..1605"
                     /db_xref="GeneID:121355276"
ORIGIN      
        1 msrqstvriq rgrsgfsaas amvpntcrts fsscsvtrlg scnagsgfar vgggfgsksl
       61 ynvggckkis vagrggsfyg sagfggagsv ygggfgvpan lgygygafgg gpgfpaggih
      121 evsinqsllk plnleidpni qrirkeekeq iktlnnkfas fidkvrfleq qnkvletkws
      181 llqeqgmktv rnnleplfet yinnlrvqln sllsdkgrle gelvntqylv edfkkkyede
      241 inrrtiaene fvtlkkdvda symnkvelqa radalteein flralyeael sqmqtqisdt
      301 svvltmdnnr nldldsiise vkaqyedian rsraeaeswy qtkyeelqat agrhgddlrn
      361 tkqeiselnr hvqrlrseid svkkqcanlk aaiadaeerg eltlkdarak laeledalqq
      421 akadlarqlr eyqelmnvkl aldieiatyr kllegeecrl agdgvpvnis vtrttvgtgy
      481 gggsnlsmgg gicnlgnsfn cgsvpgmsst tlgagssssm kfvsssstrr syrs
//
LOCUS       XP_041326485             524 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 75-like isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326485
VERSION     XP_041326485.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470551.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..524
                     /product="keratin, type II cytoskeletal 75-like isoform
                     X2"
                     /calculated_mol_wt=57361
     Region          15..133
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          136..449
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..524
                     /gene="LOC121355276"
                     /coded_by="XM_041470551.1:1..1575"
                     /db_xref="GeneID:121355276"
ORIGIN      
        1 msrqstvriq rgrsgfsaas amvpntcrts fsscsvtrlg scnagsgfar vgggfgsksl
       61 ynvggckkis vagrggsfyg sagfggagtn lgygygafgg gpgfpaggih evsinqsllk
      121 plnleidpni qrirkeekeq iktlnnkfas fidkvrfleq qnkvletkws llqeqgmktv
      181 rnnleplfet yinnlrvqln sllsdkgrle gelvntqylv edfkkkyede inrrtiaene
      241 fvtlkkdvda symnkvelqa radalteein flralyeael sqmqtqisdt svvltmdnnr
      301 nldldsiise vkaqyedian rsraeaeswy qtkyeelqat agrhgddlrn tkqeiselnr
      361 hvqrlrseid svkkqcanlk aaiadaeerg eltlkdarak laeledalqq akadlarqlr
      421 eyqelmnvkl aldieiatyr kllegeecrl agdgvpvnis vtrttvgtgy gggsnlsmgg
      481 gicnlgnsfn cgsvpgmsst tlgagssssm kfvsssstrr syrs
//
LOCUS       XP_041326486             311 aa            linear   VRT 06-MAY-2021
DEFINITION  protein lifeguard 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326486
VERSION     XP_041326486.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470552.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="protein lifeguard 2"
                     /calculated_mol_wt=34547
     Region          87..307
                     /region_name="LFG_like"
                     /note="Proteins similar to and including lifeguard (LFG),
                     a putative regulator of apoptosis; cd10428"
                     /db_xref="CDD:198410"
     CDS             1..311
                     /gene="FAIM2"
                     /coded_by="XM_041470552.1:87..1022"
                     /db_xref="GeneID:121355277"
ORIGIN      
        1 mtqgklsvnn kppssegqgd kkdnatappa ppsyeeatag egmksgafpa ppaaplhpsw
       61 ayvdpsssps ygsggypgdt ellttfswdd rnvrrvfirk vyailmvqll vtvvivafft
      121 fcepvkgyiq thsawywasy avffvtylil accsgprryf pwnlillsif tlsmayltam
      181 lssyyntksv llclgitalv clsvtifsfq skfdftsyqg ilfvllmvlf lgglvlavil
      241 pyqyvpwlha iyallgagif tmflaldtqm lmgnrrysls peeyifgaln iyldiiyifs
      301 fflqffgssq e
//
LOCUS       XP_041326488              84 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-glucagon-like isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326488
VERSION     XP_041326488.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470554.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..84
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..84
                     /product="pro-glucagon-like isoform X1"
                     /calculated_mol_wt=9665
     Region          52..79
                     /region_name="Hormone_2"
                     /note="Peptide hormone; pfam00123"
                     /db_xref="CDD:459681"
     CDS             1..84
                     /gene="LOC121355278"
                     /coded_by="XM_041470554.1:3..257"
                     /db_xref="GeneID:121355278"
ORIGIN      
        1 mvrwlylsgl llavlipagg qvapkdleep ssrwklfgpq nsqsflshik rhsegtftsd
       61 ftryldrmka kdfvhwlint kryn
//
LOCUS       XP_041326489              83 aa            linear   VRT 06-MAY-2021
DEFINITION  pro-glucagon-like isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326489
VERSION     XP_041326489.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470555.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..83
                     /product="pro-glucagon-like isoform X2"
                     /calculated_mol_wt=9578
     Region          51..78
                     /region_name="Hormone_2"
                     /note="Peptide hormone; pfam00123"
                     /db_xref="CDD:459681"
     CDS             1..83
                     /gene="LOC121355278"
                     /coded_by="XM_041470555.1:3..254"
                     /db_xref="GeneID:121355278"
ORIGIN      
        1 mvrwlylsgl llavlipagg qvapkdleep srwklfgpqn sqsflshikr hsegtftsdf
       61 tryldrmkak dfvhwlintk ryn
//
LOCUS       XP_041326490             262 aa            linear   VRT 06-MAY-2021
DEFINITION  RNA 5'-monophosphate methyltransferase [Pyrgilauda ruficollis].
ACCESSION   XP_041326490
VERSION     XP_041326490.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470556.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..262
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..262
                     /product="RNA 5'-monophosphate methyltransferase"
                     /calculated_mol_wt=28758
     Region          57..176
                     /region_name="Methyltransf_25"
                     /note="Methyltransferase domain; pfam13649"
                     /db_xref="CDD:463945"
     Region          147..252
                     /region_name="Bin3"
                     /note="Bicoid-interacting protein 3 (Bin3); pfam06859"
                     /db_xref="CDD:462022"
     CDS             1..262
                     /gene="BCDIN3D"
                     /coded_by="XM_041470556.1:20..808"
                     /db_xref="GeneID:121355279"
ORIGIN      
        1 maapisrdsr gsepgaapyg nfpnysrfhp pegrisllpq gllrslfpaa trpllgldvg
       61 cnsgelsval yqhllglqds ssspeppgag kelkllccdi dpelirraqq sspfpasisf
      121 asldimdsga repflssyle rfgrssfdig fcmsvtmwih lnhgdrglle flallaslct
      181 fllvepqpwr cyraaarrlr rlgrddfehf rslringdma esitriltqe camelvcsfg
      241 stswdrslll fkstaarpeg sg
//
LOCUS       XP_041326491             409 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: keratin, type II cytoskeletal 75-like
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326491
VERSION     XP_041326491.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470557.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 28% of CDS bases
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="LOW QUALITY PROTEIN: keratin, type II
                     cytoskeletal 75-like"
                     /calculated_mol_wt=46644
     Region          <97..136
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          139..400
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..409
                     /gene="LOC121355280"
                     /coded_by="XM_041470557.1:1..1230"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /db_xref="GeneID:121355280"
ORIGIN      
        1 mlrlflawll rcwpspsmaa eeilyllgls elvlllhdah paqqpqlrvh vpwpcwrhgk
       61 gqrslqqeep sqpwgehedg hewrargcqn rrqpraggra geaelgcgpg giqkvmvnqc
      121 llvplnleid pnvqqvqqed kdqiksfnnx fasfinkvrh ilnkkkvlet kwsllkgqki
      181 vqnnlepmfe lyisntrwql ealgqerlql sselkamqdv vedfkvryqq einkcttaen
      241 nfvmfnkdvd aacvnkvdqg tkvdsladei nflxalyeaq lcwmqthisd tsvvlsmdns
      301 qsldlesiit kvkehcedta nqsraeaksw yqskvaklqm aiadmeqhgd ialkdtrarl
      361 ekletalqka kadlarqlwk yqelmnikla ldieimtyrk sclekvlvl
//
LOCUS       XP_041326492             713 aa            linear   VRT 06-MAY-2021
DEFINITION  basic proline-rich protein-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326492
VERSION     XP_041326492.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470558.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..713
                     /product="basic proline-rich protein-like"
                     /calculated_mol_wt=78676
     CDS             1..713
                     /gene="LOC121355282"
                     /coded_by="XM_041470558.1:1..2142"
                     /db_xref="GeneID:121355282"
ORIGIN      
        1 mepplpeldk pppdpepfpp pemeppppel dphppelllp ldmepplpel ppppdpepfp
       61 ppemeppppe ldphppelll pldmepplpe lppppdpepf pppemepppp eldphppell
      121 lpldmepplp elppppdpep fpppemeppp peldphppel llpldmeppl pelppppdpe
      181 pfpppemepp ppeldphppe lllpldmepp lpelppppdp epfpppemep pppeldphpp
      241 elllpldmep plpelppppd pepfpppeme ppppeldphp pelllpldme pplpelpppp
      301 dpepfpppem eppppeldph ppelllpldm epplpelppp pdpepfpppe meppppeldp
      361 hppelllpld mepplpelpp ppdpepfppp emeppppeld phppelllpl dmepplpelp
      421 pppdpepfpp pemeppppel dphppelllp ldmepplpel ppppdpepfp ppemeppppe
      481 ldphppelll pldmepplpe lppppdpepf pppemepppp eldphppell lpldmepplp
      541 elppppdpep fpppemeppp peldphppel llpldmeppl pelppppdpe pfpppemepp
      601 ppeldphppe lllpldmepp lpelppppdp epfpppemep pppkldpppp elppfpppvt
      661 gpfvllplvp selilpftlf mppktpetla lwsmtpgrng nyiqfilfts ens
//
LOCUS       XP_041326493             369 aa            linear   VRT 06-MAY-2021
DEFINITION  keratin, type II cytoskeletal 6C-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326493
VERSION     XP_041326493.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470559.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523800.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..369
                     /product="keratin, type II cytoskeletal 6C-like"
                     /calculated_mol_wt=43371
     Region          <10..35
                     /region_name="Keratin_2_head"
                     /note="Keratin type II head; pfam16208"
                     /db_xref="CDD:465068"
     Region          39..352
                     /region_name="Filament"
                     /note="Intermediate filament protein; pfam00038"
                     /db_xref="CDD:459643"
     CDS             1..369
                     /gene="LOC121355283"
                     /coded_by="XM_041470559.1:1..1110"
                     /db_xref="GeneID:121355283"
ORIGIN      
        1 mgdseglsmg ieevhvntnl lrpirlqvdp efqrvcsder eqikalnnkf asfiekvqcl
       61 erqnqallak wellqqqssg peerrninsf fqsyitnlqr qletlqsqke qldpeaynml
      121 qlvedyknrf edeinkrtsk eeefvelkke ldsaymgkme sdvrvdilrq eleflrclye
      181 aelsqlqtva gnvdvilsmd nhrdlnmdgi ieevrqeyer mahrsmaevd amyrgryqdl
      241 qnmwvsqreq lrnshqeiqe larqiqrlqp eieiarkrns slqdsikdae hrgssavrdg
      301 qekleelena lqqakddlsq lvhdyqelln vklgldieia myrslleeee nrwgqnppwd
      361 pgritshnl
//
LOCUS       XP_041326494             108 aa            linear   VRT 06-MAY-2021
DEFINITION  feather beta keratin-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326494
VERSION     XP_041326494.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470560.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523820.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..108
                     /product="feather beta keratin-like"
                     /calculated_mol_wt=10853
     Region          3..77
                     /region_name="Keratin"
                     /note="pfam02422"
                     /db_xref="CDD:460553"
     CDS             1..108
                     /gene="LOC121355287"
                     /coded_by="XM_041470560.1:1..327"
                     /db_xref="GeneID:121355287"
ORIGIN      
        1 macnniyrpc gptplanscn epcalqcqds rviinpspvl vtlpgpimts fpqstavgst
       61 ssaalgtels aqgqpisggf gfglgygrgf gyglgglscy grrggync
//
LOCUS       XP_041326496            1259 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: regulator of G-protein signaling 22
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326496
VERSION     XP_041326496.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470562.1
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 1% of CDS bases
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1259
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1259
                     /product="LOW QUALITY PROTEIN: regulator of G-protein
                     signaling 22"
                     /calculated_mol_wt=143971
     Region          627..742
                     /region_name="RGS_RGS22_2"
                     /note="Regulator of G protein signaling domain
                     RGS_RGS22_2; cd08727"
                     /db_xref="CDD:188682"
     Region          802..931
                     /region_name="RGS"
                     /note="Regulator of G protein signaling (RGS) domain
                     superfamily; cl02565"
                     /db_xref="CDD:470619"
     Region          973..1094
                     /region_name="RGS_RGS22_4"
                     /note="Regulator of G protein signaling domain
                     RGS_RGS22_4; cd08725"
                     /db_xref="CDD:188680"
     CDS             1..1259
                     /gene="RGS22"
                     /coded_by="XM_041470562.1:1..3780"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /db_xref="GeneID:121355288"
ORIGIN      
        1 mlskrlttep pciteemlee clatddmlvd ffneflsllt faqpvkfnsa vgafevvnya
       61 pqclesqpkk ilhdqkppss iydvlrkenn dgqlskmqsa sstfsidpny ntmqldqeqa
      121 iewikkerlp aflesdcyfe yrlaklisqv ewsktginfi idsdyspwir irkqsprspr
      181 peeddsslts sltsltmekf yvslgeatvs qvkdwftlak qgdsvkttds ytrpvassni
      241 qdtqhlpgqh krdeslpgkg prlgtasaka dvtsersrea eegcsvavae apshtrsrvy
      301 ldpkwhrate eedergsttf qteeeftqts sqiamkepfs eltlqstadi etldskedvr
      361 kqgslspsse svgpdsraaw cishgtydtg nrheferfkk fikgtlgery wwlwmdierl
      421 kalknttrqq rqlskmkkly llssgdyfls sevllrlell hgdqwnimhl rqiqpevvkp
      481 lllywgprfc vthstaidaa saklkfwhtc qerprvdidp fpqivsllpl tqksdispsl
      541 lqkssgllpt ltgsqilqrd disssrmwpm svstdmihsl aldgtkdsey qghrkytyae
      601 llhgksaass vvfrgsgies mlqslylenr agyyftqfce ksgnklwknc vyfwfdlqay
      661 hqlfyqetlq pfqicqqaqf lyatyiapsa smdtglhqnk knmiyhkidp afedlfdlae
      721 ehiltvllep wmkmvkedky tyrkvelvee tqqldsvyfr elqalhqvss srkdestvad
      781 tgalkedqhl hqapkelagp nlsdlihdke kleqfqafln khsasmdlmc wldieefrkt
      841 fhkdkeksde kskdiktkyl nneyffgpns patreqqeel mhsgggrrqs lhdqlsaavl
      901 levqqcvqkr lekqwlplfl adehhgaeee akirditedl shkdqxkttr mwkhvdnesv
      961 sssseiiafr kalldpvtan lfqrfvalkg dllgngvlfw qevqkykdlc hshcadalvq
     1021 kkitaiidcf insaippalq idippeqakk ivehrkelgp yifreaqmsi fallfkfwpe
     1081 fckfqsnpes dkilvslekk kgkemqkmeg itakvrlgke aekklinlaq lksltqpnsl
     1141 tqpksltqpk sltqrksltq pepltqlkpl tqlpktvlld eldvkrrsst plaptegqgr
     1201 kaswsyskyi ealeherili krqedlqkts sslpagslsm sslkpesfvk atipakhkf
//
LOCUS       XP_041326497             291 aa            linear   VRT 06-MAY-2021
DEFINITION  translation initiation factor IF-2-like [Pyrgilauda ruficollis].
ACCESSION   XP_041326497
VERSION     XP_041326497.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470563.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..291
                     /product="translation initiation factor IF-2-like"
                     /calculated_mol_wt=30050
     Region          <67..276
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     CDS             1..291
                     /gene="LOC121355289"
                     /coded_by="XM_041470563.1:1..876"
                     /db_xref="GeneID:121355289"
ORIGIN      
        1 mqgkhsagrg lfpllvphrp hsrdalslqt ppttgsgvgn tpqrgqleal rgeklsgrrc
       61 ercprgaggp gaarvplpvp glpvprkfkc rssqapgpmp lagggsaapa egprgpprla
      121 eggsssphta pgpsgthpgl pepwgpavpp ssatgrslrp ggdnghddft lqqceqqrgt
      181 pptsprppgr sralsprara paqrrlrlgg sappltrrha qgggrrrrpe pgdaatagpl
      241 gaprpaadpp pvpvsrreea allrppepga aqeapplnhs hcrlrilwnw s
//
LOCUS       XP_041326498            1000 aa            linear   VRT 06-MAY-2021
DEFINITION  grainyhead-like protein 2 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041326498
VERSION     XP_041326498.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470564.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1000
                     /product="grainyhead-like protein 2 homolog"
                     /calculated_mol_wt=109417
     Region          8..>148
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          <226..365
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          606..813
                     /region_name="CP2"
                     /note="CP2 transcription factor; pfam04516"
                     /db_xref="CDD:461338"
     CDS             1..1000
                     /gene="GRHL2"
                     /coded_by="XM_041470564.1:1..3003"
                     /db_xref="GeneID:121355290"
ORIGIN      
        1 matarlscnp shqdrwppkr htaargpaas ppgseglgrp lregrpgpgl rpsggpggag
       61 aaaappralr egsdhgktdt rteaaagerr pasgagpaag pgrlpspgpg llpfprpapp
      121 hptplpsapl prrcspvrdp gwaalpsave aprgpaaaaa reeneeeeeg pgpavrarrt
      181 rprarapraa langgarplh nagvggqrdp rvrgreaaal tgsrvrvpaa edpagfhrqq
      241 pdwvaeaakp glgtlgtslr ccgqgrggvp rwagsgpgah rdqpgqaalp rpapgsaarv
      301 eprlagpqrr araasrsqph ssvlslspad ktdpstpvin ipnsdlkvqf rqadggtgkr
      361 gessldqtch krrtivpsgs qfyssclcsn krlvalvpnd tsfntrrayt sedeawksyl
      421 enpltaatka mmsingdeds aaalgllydy ykvprdkrll svnkvsdnqe dqdkrnclnt
      481 teaqnnlsgg enrvqvlktv pvnlslnqdp lesskreynt nvsgsstpit gsavtvvkae
      541 eftpvfmtpq thyargenee hrgvifepye vsniaphtny lkddqrstpd stysdtfkdg
      601 gtekyrsvsv gaeeyiyeqt stfqytleat kslrqkqgeg pmtylnkgqf yaitlsetgd
      661 nkcfrhpisk vrsvvmvvfs edknrdeqlk ywkywhsrqh takqrvldia dykesfntig
      721 nieeiafnav sftwdvneea kifitvncls tdfssqkgvk glplmiqidt ysynnrsnkp
      781 ihraycqikv fcdkgaerki rdeerkqnrk kgkgqasqas cnnaaegkls alplqkksdi
      841 tffktmadld sqpvlfipdv hfgnlqrtgq vyyntddere gssvlvkrmf rpveeefgps
      901 plkqikeegl krvllyvrke tdevfdalml ksptvkglme aisekyglpv ekiaklykks
      961 kkgilvnmdd niiehysned tfilnmenmv egfkitltei
//
LOCUS       XP_041326499            2792 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase UBR5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326499
VERSION     XP_041326499.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470565.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..2792
                     /product="E3 ubiquitin-protein ligase UBR5"
                     /calculated_mol_wt=308349
     Region          169..211
                     /region_name="CUE_UBR5"
                     /note="CUE domain found in E3 ubiquitin-protein ligase
                     UBR5 and similar proteins; cd14423"
                     /db_xref="CDD:270606"
     Site            order(177,180..181,183,201..202,205..206,209..210)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270606"
     Region          1165..1240
                     /region_name="UBR-box_UBR5"
                     /note="UBR-box found in HECT-type E3 ubiquitin-protein
                     ligase UBR5 and similar proteins; cd19675"
                     /db_xref="CDD:439073"
     Site            order(1190,1193,1202,1205,1209..1210,1213,1226,1228,1234)
                     /site_type="other"
                     /note="putative Zn binding site [ion binding]"
                     /db_xref="CDD:439073"
     Region          2383..2446
                     /region_name="PolyA"
                     /note="C-terminal domain of Poly(A)-binding protein.
                     Present also in Drosophila hyperplastics discs protein;
                     smart00517"
                     /db_xref="CDD:197769"
     Region          2461..2789
                     /region_name="HECTc"
                     /note="Domain Homologous to E6-AP Carboxyl Terminus with;
                     smart00119"
                     /db_xref="CDD:214523"
     Site            order(2568,2571..2572,2574..2575,2578,2591,2593,
                     2597..2598,2605,2610,2627,2631)
                     /site_type="active"
                     /note="E2 interaction site [active]"
                     /db_xref="CDD:238033"
     CDS             1..2792
                     /gene="UBR5"
                     /coded_by="XM_041470565.1:1..8379"
                     /db_xref="GeneID:121355291"
ORIGIN      
        1 mgdrgvlrev seklnkynln shpplnvleq atikqcvvgp nhaaflledg rvcrigfsvq
       61 pdrlelgkpe nsdgsklssg sgagrtsrpg rtsdspwfls gsetlgrlag ntlgsrwssg
      121 vggsgggssg rssagardsr rqtrvirtgr drgsgllgsq pqpvipasvi peelisqaqv
      181 vlqgksrsii irelqrtnld vnlavnnlls rddedgddgd dtasesylpg edlmslldad
      241 ihsahpsvii dadamfsedi syfgypsfrr sslsrlgssr erdsellrer esvlrlrerr
      301 wldgasfdne rgstskegep nldkkntpvq spvslgedlq wwpdkdgtkf isigalysel
      361 vavsskgely qwkwsesepy rnaqnpslhh pramflgltn ekivllsans iratvatenn
      421 kvatwvdetl ssvaskleht aqtyselqge rivslhccal ytcaqlennl ywwgvvpfsq
      481 rkkmlekara knkkpkssag issmpnitvg tqvclrnnpl yhagavafsi sagipkvgvl
      541 mesvwnmnds crfqlrspes lknmekaskt teakpeskqe pvktemgppp spastcsdas
      601 siassasmpy krrrstpapk eeekvneeqw slrevvfved vknvpvgkvl kvdgayvavk
      661 fpgtsnnanc qsssnsdpdp ssllqdcrll ridelqvvkt ggtpkvpdcf qrtpkklcip
      721 ekteilavnv dskgvhavlk tgnwvrycif dlatgkaeqe nnfptssiaf lgqnersvai
      781 ftagqespii lrdgngtiyp makdcmggir dpdwldlppi sslgmgvhsl tnlpanstik
      841 kkaaiiimav ekqtlmqhil rcdyeacrqy lmnleqavvl dqnpqmlqtf lghrcdgnrn
      901 ilhacvsvcf ptsnketkee eglphsvhkm dgahrmeaer serntfaerl saveaianai
      961 svvssngpgn ragssssrsl rlremmrrsl raaglgrhea gasssdhqdp vsppiappsw
     1021 vpdppamdpd gdidfilapa vgslttaatg tgqgpststi pgpstepsvv eskdrkanah
     1081 filkllcdsv vlqpylrell sakdargmtp fmsavsgray paaitileta qkiakaeats
     1141 sekeddvfmg mvcpsgtnpd dsplyvlccn dtcsftwtga ehinqdifec rtcglleslc
     1201 cctecarvch kghdcklkrt sptaycdcwe kckcktliag qksarldlly rlltttnlvt
     1261 mpnsrgehll lflvqtvarq tvehcqyrpp riredrnrkt anpedsdmpd hdlepprfaq
     1321 lalervlqdw nalksmimfg sqenkdplsa ssrighllpe eqvylnqqsg tirldcfthc
     1381 livkctadil lldtllgtlv kelqnkytpg rreeaiavtm rflrsvarvf vilsvemass
     1441 kkknnfipqp igkckrvfqa llpyaveelc nvaesliipv rmgiarptap ftlastsida
     1501 mqgseelfsv eplpprpssd qsssssqsqs syiirnpqqr risqsqpvrg rdeeqddivs
     1561 adveevevve gvageedhhd eqeehgeena eaegqhdehd edgsdmeldl laaaetesds
     1621 esnhsnqdna sgrrsvvtaa tagseagass vpaffsedds qsndssdsds sssqsddieq
     1681 etfmldeple rttnsshang aaqaprsmqw avrntqnqrt tstapsstst paassagliy
     1741 idpsnlrrsg tistsaaaaa aaleasnass yltsasslar aysivirqis dlmglipkyn
     1801 hlvysqipaa vkltyqdavn lqnyveekli ptwnwmvsim dsteaqlryg salssagdpg
     1861 hpnhplhasq nsarrermta reeaslrtle grrratllsa rqgmmsargd flnyalslmr
     1921 shndehsdvl pvldvcslkh vayvfqaliy wikamnqqtt ldtpqlerkr trellelgld
     1981 nedsehendd dtnqsatlnd kdddtlpaet gqnhpffrrs dsmtflgcip pnpfevplae
     2041 aipladqphl lqpnarkedl fgrpsqglys ssansgkclv evtvdrncle vlptkmsyaa
     2101 nlknvmsmqn rqrkegeeqn vpteesessk pgpsahdlaa qlkssllaei gltesegppl
     2161 tsfrpqcsfm gmvishdmll grwrlslelf grvfmedvga epgsiltelg gfevkeskfr
     2221 remeklrnqq srdltlevdr drdlliqqtm rqlnnhfgrr cattpmavhr vkvtfkdepg
     2281 egsgvarsfy taiaqaflsn eklpnldciq nankgthtsl mqrlrnrger drerererem
     2341 rrssglrtgs rrdrdrdfrr qlsidtrpfr pasegnpsdd pdplpahrqa lgerlyprvq
     2401 amqpafaski tgmllelspa qlllllased slrarvdeam eliiahgren gadsildlgl
     2461 ldssdkvqen rkrhgssrsv vdmelddtdd gddnaplfyq pgkrgfytpr pgkntearln
     2521 cfrnigrilg lcllqnelcp itlnrhvikv llgrkvnwhd faffdpvmye slrqlilasq
     2581 stdadavfaa mdlafaidlc keegggqvel isngvnipvt pqnvyeyvrk yaehrmlvva
     2641 eqplhamrkg lldvlpknsl edltaedfrl lvngcgevnv qmlisftsfn desgenaekl
     2701 lqfkrwfwsi vekmsmterq dlvyfwtssp slpaseegfq pmpsitirpp ddqhlptant
     2761 cisrlyvply sskqilkqkl llaiktknfg fv
//
LOCUS       XP_041326500             281 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen triple helix repeat-containing protein 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326500
VERSION     XP_041326500.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470566.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 17% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="collagen triple helix repeat-containing protein
                     1"
                     /calculated_mol_wt=30165
     Region          <95..127
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     CDS             1..281
                     /gene="CTHRC1"
                     /coded_by="XM_041470566.1:1..846"
                     /db_xref="GeneID:121355292"
ORIGIN      
        1 meipglpgeg agaarserli yrraaaqsrd pgcccrrprr ipprtmprar apllllllll
       61 laaapphggs espkgkqkal rqrevvdvyn gmclqgpsgv pgrdgnpgan gipgtpgipg
      121 rdglkgekge cmresieesw tpnfkqcsws alnygidlgk iaectftkmr snsalrvlfs
      181 gslrlkcrsa ccqrwyftfn gaecagplpi eaiiyldqgs pelnstinih rtssveglce
      241 ginaglvdia iwvgtcsdyp rgdastgwns vsriiieelp k
//
LOCUS       XP_041326501             420 aa            linear   VRT 06-MAY-2021
DEFINITION  eukaryotic translation initiation factor 3 subunit E [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326501
VERSION     XP_041326501.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470567.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..420
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..420
                     /product="eukaryotic translation initiation factor 3
                     subunit E"
                     /calculated_mol_wt=48984
     Region          3..399
                     /region_name="eIF3E"
                     /note="eukaryotic translation initiation factor 3 subunit
                     E; cd21378"
                     /db_xref="CDD:411062"
     Site            order(4,7..8,11..12,16,219..221,246,256,259..260,276..278,
                     280,321..325,343..344,347,350..352,357..362,370..372)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:411062"
     Site            order(376..377,379..380,383..384,387..388,390..392,395)
                     /site_type="other"
                     /note="helix bundle interface [polypeptide binding]"
                     /db_xref="CDD:411062"
     CDS             1..420
                     /gene="EIF3E"
                     /coded_by="XM_041470567.1:62..1324"
                     /db_xref="GeneID:121355293"
ORIGIN      
        1 maeydlttri ahfldrhlvf plleflsvke iynekellqg kldllsdtnm vdfamdvykn
       61 lysdeiphal rekrttvvaq lkqlqaetep ivkmfedpet trqmqstrdg rmlfdylaek
      121 hgfrqeyldt lyryakfqye cgnysgaaey lyffrvlvpa tdrnalsslw gklaseilmq
      181 nwdaamedlt rlketidnnv skildilall mfflcrylna iqtmcphilr ylttavitnk
      241 dvrkrrqvlk dlvkviqqes ytyrdpitef veclyvnfdf dgaqkklrec etvlvndffl
      301 vacledfien arlfifetfc rihqcisigm ladklnmtpe eaerwivnli rnarldakld
      361 sklghvvmgn navspyqqvi ektkslsfrs qmlamniekk lnqsgrseap nwatqdsgfy
//
LOCUS       XP_041326502             267 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein LOC121355294 [Pyrgilauda ruficollis].
ACCESSION   XP_041326502
VERSION     XP_041326502.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470568.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 43% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..267
                     /product="uncharacterized protein LOC121355294"
                     /calculated_mol_wt=27148
     CDS             1..267
                     /gene="LOC121355294"
                     /coded_by="XM_041470568.1:1..804"
                     /db_xref="GeneID:121355294"
ORIGIN      
        1 mvsappgggr saalarsgaw haalsatvpg rsspstergl gtqrspqpcr dgavrarsga
       61 warsalralp gtgqsrhgag pghaalsaav pgmvsappgg grsaalarsg awarsgawha
      121 elsaavpgrs spsterglgt erspqpcrdg avrarsgawr galsaalpga grsspsterg
      181 larsaprsra vcgtersgha agpaaaalrr vlcrrhgrap rslqglsvra ckrqcpserg
      241 qsrrnvmpvw rrgggllsct rkedeqr
//
LOCUS       XP_041326503             413 aa            linear   VRT 06-MAY-2021
DEFINITION  thyrotropin-releasing hormone receptor [Pyrgilauda ruficollis].
ACCESSION   XP_041326503
VERSION     XP_041326503.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470569.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..413
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..413
                     /product="thyrotropin-releasing hormone receptor"
                     /calculated_mol_wt=46802
     Region          28..333
                     /region_name="7tmA_TRH-R"
                     /note="thyrotropin-releasing hormone receptor, member of
                     the class A family of seven-transmembrane G
                     protein-coupled receptors; cd14995"
                     /db_xref="CDD:320126"
     Region          29..55
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320126"
     Region          62..87
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320126"
     Site            order(85,88..89,100..105,107..108,111,156,158..162,190,
                     193..195,197..199,201..202,281,284..285,287..288,291,
                     300..301,303..305,308,311..312)
                     /site_type="other"
                     /note="putative peptide ligand binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:320126"
     Region          100..130
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320126"
     Region          143..164
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320126"
     Region          190..219
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320126"
     Region          261..291
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320126"
     Region          301..326
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320126"
     CDS             1..413
                     /gene="TRHR"
                     /coded_by="XM_041470569.1:1..1242"
                     /db_xref="GeneID:121355296"
ORIGIN      
        1 mengtgdeqn qtglplssqe iitaeyqvvt illvllicgl givgnvmvvl vvlrtkhmrt
       61 ptncylvsla vadlmvlvaa glpnitesly rswvygyvgc lcitylqylg inassfsiaa
      121 ftieryiaic hpikaqflct fsrakkiiif vwsftsiycm lwfflldlnt vaykettvvs
      181 cgykvsrsyy spiymmdfgi fyvvpmvlat vlygliakil flnpipsdpk ensktwrndv
      241 ahqskpvnsk mtnrsfnsti asrrqvtkml avvvilfafl wmpyrtlvvv nsflsrpfqe
      301 nwfllfcric iylnsainpv iynlmsqkfr aafrklcnyq qkqekkpany smalnynvik
      361 dsdhfstele ditntflssa klsigdtcls skvivntfqc llwvlqnqst lla
//
LOCUS       XP_041326504            1887 aa            linear   VRT 06-MAY-2021
DEFINITION  collagen alpha-1(XIV) chain [Pyrgilauda ruficollis].
ACCESSION   XP_041326504
VERSION     XP_041326504.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470570.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1887
                     /product="collagen alpha-1(XIV) chain"
                     /calculated_mol_wt=202303
     Region          31..112
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(107..108,110..111)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          158..321
                     /region_name="vWA_collagen_alphaI-XII-like"
                     /note="Collagen: The extracellular matrix represents a
                     complex alloy of variable members of diverse protein
                     families defining structural integrity and various
                     physiological functions. The most abundant family is the
                     collagens with more than 20 different...; cd01482"
                     /db_xref="CDD:238759"
     Site            order(165,167,169,236,269)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238759"
     Site            order(167..169,171,236)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238759"
     Region          349..909
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          926..1001
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          1041..1205
                     /region_name="vWA_collagen_alphaI-XII-like"
                     /note="Collagen: The extracellular matrix represents a
                     complex alloy of variable members of diverse protein
                     families defining structural integrity and various
                     physiological functions. The most abundant family is the
                     collagens with more than 20 different...; cd01482"
                     /db_xref="CDD:238759"
     Site            order(1048,1050,1052,1120,1153)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238759"
     Site            order(1050..1052,1054,1120)
                     /site_type="active"
                     /note="integrin-collagen binding site [active]"
                     /db_xref="CDD:238759"
     Region          1239..1434
                     /region_name="TSPN"
                     /note="Thrombospondin N-terminal -like domains;
                     smart00210"
                     /db_xref="CDD:214560"
     Region          <1487..>1715
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     CDS             1..1887
                     /gene="COL14A1"
                     /coded_by="XM_041470570.1:142..5805"
                     /db_xref="GeneID:121355297"
ORIGIN      
        1 mlcryeiqsc fllafltvtp ffisdvqgqv spptrlrynv vspdsvqisw kapkgqftgy
       61 kllvtpssgg ktnqlilqnt atkaiiqgli pdqnyalqii afsedkeskp aqgqfrikdi
      121 errkdtsksk vkdpektnas kpapeeevlf tcktpaiadi vilvdgswsi grfnfrlvrl
      181 flenlvsafn vgsektrvgl aqysgdprie whlnaygtkd avldavrnlp ykggntltgl
      241 altyilensf kpeagarpgv skigilitdg ksqddvippa knlrdagiel faigvknadi
      301 nelkeiasep dsthvynvad fnfmhtiveg ltrtvcsrve eqekeikgti aslgtpsdlv
      361 tsevtargfr vswshapgkv ekyrvvyypt rggqpeevvv dgsestavlk nlmslteyqi
      421 avfaiysnaa seglrgtett lalpmasdlq lydvsqssmr vrwngvlgat gymilyaplt
      481 eglaadekei kigetstdle ldgllpntey tvtvyamfge easdpltgqe ttlplsppan
      541 lkfsdvghns aklswdpask ningyrimyv ktdgtetnev evgrvsthtl kslaplteyt
      601 valfsqydeg qsepltgsft tsevpapqhl eidevstdsf rvswkptssd iafyrlawip
      661 ldggeseevv ingdadshvi egllpdteye vsllavfdde sesevvailg atsasattvp
      721 savttasaps pepstavfrt gvrnlvidde ttsslrvtwd isdysvqqfr vtyltaeger
      781 aeeavrmvmv pgrqntlllh pllsdteykv tvtpvysdge gvsvsapgkt lplsaprnlr
      841 vsdewynrlr iswdappsat mgyrvvykpv ntpgpaletf vgddintili lnllsgteys
      901 vkvfasystg fsdaltgvak tlhlgvtnld syqvrmtslc aqwqlhrhat ayrvviesle
      961 dgkkqevnlg ggtprhcffe lmpgtkykis vhtqlqeleg pavstvettl pfptqppttp
     1021 stppppptip pakevckaak adlaflvdgs wsigddnfnk iinflystvg aldkigpdgt
     1081 qvaiiqfsdd prtefklnay ktketlleai qqiaykggnt ktgkaikhar ealftgeagm
     1141 rrgipkvlvv itdgrsqddv nkvsremqld gftffaigva dadyselvni gskpserhvf
     1201 fvddfdaftk iedelitfvc etasatcplv vkdgnnfagf kmmemfglve kefsavegvs
     1261 mepgtfnvfp cyrlhkdalv sqptkylhpe glpsdytitf lfrilpdtpq epfalweiln
     1321 eayeplvgvi ldnggktltf fnydykgdfq tvtfegpeir kifygsfhkl hvviskttak
     1381 iiidckevde ktinaagnis sdgievlgrm vrsrgprdns aplqlqmfdi icatswanrd
     1441 kccelpglrd eencpalpha cscseankgp lgppgppggp gvrgakghrg dpgpkgpdgp
     1501 rgeigvpgpq gppgpqgpsg lsiqglpgpp gekgekgdlg fpglqgvpga sgspgrdgaq
     1561 gqrgfpgkdg ptgpqgppgp mgipgapgvp gvtgsqgpqg dvgapgppga kgergergdl
     1621 qsqamvrava rqvceqliqg hmarynsiln qipsqsvstr tiagppgepg rpgapgpqge
     1681 qgspgmqgfp gspgqpgrpg erglpgekge kgnpgvgtqg prgppgstgp pgesrtgspg
     1741 ppgspgprgp aghtgspgsp gpagppgycd psscagygmg ggygeptdqd ipvvhlphns
     1801 yqiydpddly dgeqqpyvvh gsyplpspys qsypsphlaq aeftpvqeem eaaelrspgi
     1861 srfarriakr saktpvhtka ngksppq
//
LOCUS       XP_041326505            1480 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326505
VERSION     XP_041326505.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470571.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1480
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1480
                     /product="erbin isoform X1"
                     /calculated_mol_wt=164057
     Region          42..386
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          371..427
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          1390..1476
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1399..1405,1425,1428,1456,1460,1463..1464)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1480
                     /gene="ERBIN"
                     /coded_by="XM_041470571.1:93..4535"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvleq eseelssdee mkmaemrppl ietsinqpkv valsnskkdd
      661 skdtdslsde athnsnqnns ncsspsrmsd svslntdssq dvslcspdke thsavlskir
      721 reddnlnnll qnggelsitv eeklnvqekv tnlseyelsi eerlgligkg vdlstpmees
      781 hkldqinmni nklvseeavp vpvekletqk mvsvmgflnn ntkeesehle ngnkycvnkv
      841 nglaeetvqs pskekvakst tvdgdsaels vsrstedlsp qrsgpvmksh sitsmdsggl
      901 kiydtlneng sqqpnsvvks gsdtadgkni vrsksatlly dqplqvfpgs ssssdlvsst
      961 kmvfkfdsnh npeganvvrg svaggaqmlc apqyniqyss saaakdalwp qkqntqveqg
     1021 tlppsrllrs dstetpsyvk hsgnmnfsnh nnvrasavyn thqrmagrha dlwavppgdr
     1081 llpgasrhtl qrqssvssta sinigdsgps rraqvpegdy ltyrdlhsmg raaavmsgqq
     1141 rplsartysi dgpnvsrpqs arpsvseipe rtmsvsdfny srtspskrsn prvnsehsll
     1201 dpagktkvph dwreqvlrhi eakkleksml srsfnsnyaa vssfhygssr dlhgsqgsva
     1261 lsvadgrgsg vhivrhpqas apgdqcqdev fisgqqnyss atlslkdvpp dsikktavqm
     1321 pltngqmcqp qrlpanysqv hhlppqssva rhpsreqlid ylmlkvahqp pytqsqcspr
     1381 qshelakqei rvrvdkdpel gfsisggvgg rgnpfrpedd gifvtrvqpd gpaskllqpg
     1441 dkiiqangys finidhgqav sllktfqnav eliivrevss
//
LOCUS       XP_041326506            1479 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326506
VERSION     XP_041326506.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470572.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1479
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1479
                     /product="erbin isoform X2"
                     /calculated_mol_wt=163929
     Region          42..386
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          371..427
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          1389..1475
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1398..1404,1424,1427,1455,1459,1462..1463)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1479
                     /gene="ERBIN"
                     /coded_by="XM_041470572.1:92..4531"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvlee seelssdeem kmaemrppli etsinqpkvv alsnskkdds
      661 kdtdslsdea thnsnqnnsn csspsrmsds vslntdssqd vslcspdket hsavlskirr
      721 eddnlnnllq nggelsitve eklnvqekvt nlseyelsie erlgligkgv dlstpmeesh
      781 kldqinmnin klvseeavpv pvekletqkm vsvmgflnnn tkeesehlen gnkycvnkvn
      841 glaeetvqsp skekvakstt vdgdsaelsv srstedlspq rsgpvmkshs itsmdsgglk
      901 iydtlnengs qqpnsvvksg sdtadgkniv rsksatllyd qplqvfpgss sssdlvsstk
      961 mvfkfdsnhn peganvvrgs vaggaqmlca pqyniqysss aaakdalwpq kqntqveqgt
     1021 lppsrllrsd stetpsyvkh sgnmnfsnhn nvrasavynt hqrmagrhad lwavppgdrl
     1081 lpgasrhtlq rqssvsstas inigdsgpsr raqvpegdyl tyrdlhsmgr aaavmsgqqr
     1141 plsartysid gpnvsrpqsa rpsvseiper tmsvsdfnys rtspskrsnp rvnsehslld
     1201 pagktkvphd wreqvlrhie akkleksmls rsfnsnyaav ssfhygssrd lhgsqgsval
     1261 svadgrgsgv hivrhpqasa pgdqcqdevf isgqqnyssa tlslkdvppd sikktavqmp
     1321 ltngqmcqpq rlpanysqvh hlppqssvar hpsreqlidy lmlkvahqpp ytqsqcsprq
     1381 shelakqeir vrvdkdpelg fsisggvggr gnpfrpeddg ifvtrvqpdg paskllqpgd
     1441 kiiqangysf inidhgqavs llktfqnave liivrevss
//
LOCUS       XP_041326509            1455 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326509
VERSION     XP_041326509.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470575.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1455
                     /product="erbin isoform X3"
                     /calculated_mol_wt=161301
     Region          17..361
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          24..47
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          48..70
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          71..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          94..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..133
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          346..402
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          348..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          370..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          1365..1451
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1374..1380,1400,1403,1431,1435,1438..1439)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1455
                     /gene="ERBIN"
                     /coded_by="XM_041470575.1:316..4683"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 mttkrnlflr lvpcrclrge eetvttldys hcsleqvpke ifafektlee lyldanqiee
       61 lpkqlfncqs lhklslpdnd lttlpasian linlreldvs kngiqefpen iknckvltvv
      121 easvnpiskl pdgfsqllnl tqlylndafl eflpanfgrl tklqilelre nqlkilpktm
      181 srltqlerld lgsneftevp evleqlsglk efwmdgnrlt lipgfigtlk qltyldvskn
      241 nievveegis gceslqdlll ssnslqqlpe sigslkkvtt lkidenqliy lpdsigglis
      301 veeldcsfne ietlpssvgq llnirtfaad hnfltqlpse ignwkhvtvl flhsnklefl
      361 peemgdmqkl kvinlsdnrl knlpftftkl qqltamwlsd nqskpliplq keadpdtqkt
      421 vltnymfpqq prteevmfis dnesfnpslw eeqrkqraqv afecdedkde reappregnl
      481 kryptpypde lknmvktvqt ivhrlkdees tddnakeskr evqtvsvkdv gvktseigsi
      541 knkaderkqy sagssvqkps epeaehstan sqmtalvktl qntkttvnhe dvleqeseel
      601 ssdeemkmae mrpplietsi nqpkvvalsn skkddskdtd slsdeathns nqnnsncssp
      661 srmsdsvsln tdssqdvslc spdkethsav lskirreddn lnnllqngge lsitveekln
      721 vqekvtnlse yelsieerlg ligkgvdlst pmeeshkldq inmninklvs eeavpvpvek
      781 letqkmvsvm gflnnntkee sehlengnky cvnkvnglae etvqspskek vaksttvdgd
      841 saelsvsrst edlspqrsgp vmkshsitsm dsgglkiydt lnengsqqpn svvksgsdta
      901 dgknivrsks atllydqplq vfpgsssssd lvsstkmvfk fdsnhnpega nvvrgsvagg
      961 aqmlcapqyn iqysssaaak dalwpqkqnt qveqgtlpps rllrsdstet psyvkhsgnm
     1021 nfsnhnnvra savynthqrm agrhadlwav ppgdrllpga srhtlqrqss vsstasinig
     1081 dsgpsrraqv pegdyltyrd lhsmgraaav msgqqrplsa rtysidgpnv srpqsarpsv
     1141 seipertmsv sdfnysrtsp skrsnprvns ehslldpagk tkvphdwreq vlrhieakkl
     1201 eksmlsrsfn snyaavssfh ygssrdlhgs qgsvalsvad grgsgvhivr hpqasapgdq
     1261 cqdevfisgq qnyssatlsl kdvppdsikk tavqmpltng qmcqpqrlpa nysqvhhlpp
     1321 qssvarhpsr eqlidylmlk vahqppytqs qcsprqshel akqeirvrvd kdpelgfsis
     1381 ggvggrgnpf rpeddgifvt rvqpdgpask llqpgdkiiq angysfinid hgqavsllkt
     1441 fqnaveliiv revss
//
LOCUS       XP_041326510            1455 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326510
VERSION     XP_041326510.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470576.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1455
                     /product="erbin isoform X3"
                     /calculated_mol_wt=161301
     Region          17..361
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          24..47
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          48..70
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          71..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          94..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..133
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          346..402
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          348..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          370..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          1365..1451
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1374..1380,1400,1403,1431,1435,1438..1439)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1455
                     /gene="ERBIN"
                     /coded_by="XM_041470576.1:406..4773"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 mttkrnlflr lvpcrclrge eetvttldys hcsleqvpke ifafektlee lyldanqiee
       61 lpkqlfncqs lhklslpdnd lttlpasian linlreldvs kngiqefpen iknckvltvv
      121 easvnpiskl pdgfsqllnl tqlylndafl eflpanfgrl tklqilelre nqlkilpktm
      181 srltqlerld lgsneftevp evleqlsglk efwmdgnrlt lipgfigtlk qltyldvskn
      241 nievveegis gceslqdlll ssnslqqlpe sigslkkvtt lkidenqliy lpdsigglis
      301 veeldcsfne ietlpssvgq llnirtfaad hnfltqlpse ignwkhvtvl flhsnklefl
      361 peemgdmqkl kvinlsdnrl knlpftftkl qqltamwlsd nqskpliplq keadpdtqkt
      421 vltnymfpqq prteevmfis dnesfnpslw eeqrkqraqv afecdedkde reappregnl
      481 kryptpypde lknmvktvqt ivhrlkdees tddnakeskr evqtvsvkdv gvktseigsi
      541 knkaderkqy sagssvqkps epeaehstan sqmtalvktl qntkttvnhe dvleqeseel
      601 ssdeemkmae mrpplietsi nqpkvvalsn skkddskdtd slsdeathns nqnnsncssp
      661 srmsdsvsln tdssqdvslc spdkethsav lskirreddn lnnllqngge lsitveekln
      721 vqekvtnlse yelsieerlg ligkgvdlst pmeeshkldq inmninklvs eeavpvpvek
      781 letqkmvsvm gflnnntkee sehlengnky cvnkvnglae etvqspskek vaksttvdgd
      841 saelsvsrst edlspqrsgp vmkshsitsm dsgglkiydt lnengsqqpn svvksgsdta
      901 dgknivrsks atllydqplq vfpgsssssd lvsstkmvfk fdsnhnpega nvvrgsvagg
      961 aqmlcapqyn iqysssaaak dalwpqkqnt qveqgtlpps rllrsdstet psyvkhsgnm
     1021 nfsnhnnvra savynthqrm agrhadlwav ppgdrllpga srhtlqrqss vsstasinig
     1081 dsgpsrraqv pegdyltyrd lhsmgraaav msgqqrplsa rtysidgpnv srpqsarpsv
     1141 seipertmsv sdfnysrtsp skrsnprvns ehslldpagk tkvphdwreq vlrhieakkl
     1201 eksmlsrsfn snyaavssfh ygssrdlhgs qgsvalsvad grgsgvhivr hpqasapgdq
     1261 cqdevfisgq qnyssatlsl kdvppdsikk tavqmpltng qmcqpqrlpa nysqvhhlpp
     1321 qssvarhpsr eqlidylmlk vahqppytqs qcsprqshel akqeirvrvd kdpelgfsis
     1381 ggvggrgnpf rpeddgifvt rvqpdgpask llqpgdkiiq angysfinid hgqavsllkt
     1441 fqnaveliiv revss
//
LOCUS       XP_041326511            1432 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326511
VERSION     XP_041326511.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470577.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1432
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1432
                     /product="erbin isoform X4"
                     /calculated_mol_wt=159063
     Region          42..386
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          371..427
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          1342..1428
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1351..1357,1377,1380,1408,1412,1415..1416)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1432
                     /gene="ERBIN"
                     /coded_by="XM_041470577.1:92..4390"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvleq eseelssdee mkmaemrppl ietsinqpkv valsnskkdd
      661 skdtdslsde athnsnqnns ncsspsrmsd svslntdssq dvslcspdke thsavlskir
      721 reddnlnnll qnggelsitv eeklnvqekv tnlseyelsi eerlgligkg vdlstpmees
      781 hkldqinmni nklvseeavp vpvekletqk mvsvmgflnn ntkeesehle ngnkycvnkv
      841 nglaeetvqs pskekvakst tvdgdsaels vsrstedlsp qrsgpvmksh sitsmdsggl
      901 kiydtlneng sqqpnsvvks gsdtadgkni vrsksatlly dqplqvfpgs ssssdlvsst
      961 kmvfkfdsnh npeganvvrg svaggaqmlc apqyniqyss saaakdalwp qkqntqveqg
     1021 tlppsrllrs dstetpsyvk hsgnmnfsnh nnvrasavyn thqrmagrha dlwavppgdr
     1081 llpgasrhtl qrqssvssta sinigdsgps rraqvpegdy ltyrdlhsmg raaavmsgqq
     1141 rplsartysi dgpnvsrpqs arpsvseipe rtmsvsdfny srtspskrsn prvnsehsll
     1201 dpagktkvph dwreqvlrhi eakklekhpq asapgdqcqd evfisgqqny ssatlslkdv
     1261 ppdsikktav qmpltngqmc qpqrlpanys qvhhlppqss varhpsreql idylmlkvah
     1321 qppytqsqcs prqshelakq eirvrvdkdp elgfsisggv ggrgnpfrpe ddgifvtrvq
     1381 pdgpaskllq pgdkiiqang ysfinidhgq avsllktfqn aveliivrev ss
//
LOCUS       XP_041326512            1431 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326512
VERSION     XP_041326512.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470578.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1431
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1431
                     /product="erbin isoform X5"
                     /calculated_mol_wt=158935
     Region          42..386
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          371..427
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          1341..1427
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1350..1356,1376,1379,1407,1411,1414..1415)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1431
                     /gene="ERBIN"
                     /coded_by="XM_041470578.1:91..4386"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvlee seelssdeem kmaemrppli etsinqpkvv alsnskkdds
      661 kdtdslsdea thnsnqnnsn csspsrmsds vslntdssqd vslcspdket hsavlskirr
      721 eddnlnnllq nggelsitve eklnvqekvt nlseyelsie erlgligkgv dlstpmeesh
      781 kldqinmnin klvseeavpv pvekletqkm vsvmgflnnn tkeesehlen gnkycvnkvn
      841 glaeetvqsp skekvakstt vdgdsaelsv srstedlspq rsgpvmkshs itsmdsgglk
      901 iydtlnengs qqpnsvvksg sdtadgkniv rsksatllyd qplqvfpgss sssdlvsstk
      961 mvfkfdsnhn peganvvrgs vaggaqmlca pqyniqysss aaakdalwpq kqntqveqgt
     1021 lppsrllrsd stetpsyvkh sgnmnfsnhn nvrasavynt hqrmagrhad lwavppgdrl
     1081 lpgasrhtlq rqssvsstas inigdsgpsr raqvpegdyl tyrdlhsmgr aaavmsgqqr
     1141 plsartysid gpnvsrpqsa rpsvseiper tmsvsdfnys rtspskrsnp rvnsehslld
     1201 pagktkvphd wreqvlrhie akklekhpqa sapgdqcqde vfisgqqnys satlslkdvp
     1261 pdsikktavq mpltngqmcq pqrlpanysq vhhlppqssv arhpsreqli dylmlkvahq
     1321 ppytqsqcsp rqshelakqe irvrvdkdpe lgfsisggvg grgnpfrped dgifvtrvqp
     1381 dgpaskllqp gdkiiqangy sfinidhgqa vsllktfqna veliivrevs s
//
LOCUS       XP_041326513            1455 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326513
VERSION     XP_041326513.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470579.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1455
                     /product="erbin isoform X3"
                     /calculated_mol_wt=161301
     Region          17..361
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          24..47
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          48..70
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          71..93
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          94..139
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          117..133
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          140..162
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          163..185
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          186..208
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          209..231
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          232..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..275
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          278..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          301..323
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          346..402
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          348..369
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          370..383
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          1365..1451
                     /region_name="PDZ_densin_erbin-like"
                     /note="PDZ domain of densin, erbin, and related domains;
                     cd06749"
                     /db_xref="CDD:467231"
     Site            order(1374..1380,1400,1403,1431,1435,1438..1439)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467231"
     CDS             1..1455
                     /gene="ERBIN"
                     /coded_by="XM_041470579.1:491..4858"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 mttkrnlflr lvpcrclrge eetvttldys hcsleqvpke ifafektlee lyldanqiee
       61 lpkqlfncqs lhklslpdnd lttlpasian linlreldvs kngiqefpen iknckvltvv
      121 easvnpiskl pdgfsqllnl tqlylndafl eflpanfgrl tklqilelre nqlkilpktm
      181 srltqlerld lgsneftevp evleqlsglk efwmdgnrlt lipgfigtlk qltyldvskn
      241 nievveegis gceslqdlll ssnslqqlpe sigslkkvtt lkidenqliy lpdsigglis
      301 veeldcsfne ietlpssvgq llnirtfaad hnfltqlpse ignwkhvtvl flhsnklefl
      361 peemgdmqkl kvinlsdnrl knlpftftkl qqltamwlsd nqskpliplq keadpdtqkt
      421 vltnymfpqq prteevmfis dnesfnpslw eeqrkqraqv afecdedkde reappregnl
      481 kryptpypde lknmvktvqt ivhrlkdees tddnakeskr evqtvsvkdv gvktseigsi
      541 knkaderkqy sagssvqkps epeaehstan sqmtalvktl qntkttvnhe dvleqeseel
      601 ssdeemkmae mrpplietsi nqpkvvalsn skkddskdtd slsdeathns nqnnsncssp
      661 srmsdsvsln tdssqdvslc spdkethsav lskirreddn lnnllqngge lsitveekln
      721 vqekvtnlse yelsieerlg ligkgvdlst pmeeshkldq inmninklvs eeavpvpvek
      781 letqkmvsvm gflnnntkee sehlengnky cvnkvnglae etvqspskek vaksttvdgd
      841 saelsvsrst edlspqrsgp vmkshsitsm dsgglkiydt lnengsqqpn svvksgsdta
      901 dgknivrsks atllydqplq vfpgsssssd lvsstkmvfk fdsnhnpega nvvrgsvagg
      961 aqmlcapqyn iqysssaaak dalwpqkqnt qveqgtlpps rllrsdstet psyvkhsgnm
     1021 nfsnhnnvra savynthqrm agrhadlwav ppgdrllpga srhtlqrqss vsstasinig
     1081 dsgpsrraqv pegdyltyrd lhsmgraaav msgqqrplsa rtysidgpnv srpqsarpsv
     1141 seipertmsv sdfnysrtsp skrsnprvns ehslldpagk tkvphdwreq vlrhieakkl
     1201 eksmlsrsfn snyaavssfh ygssrdlhgs qgsvalsvad grgsgvhivr hpqasapgdq
     1261 cqdevfisgq qnyssatlsl kdvppdsikk tavqmpltng qmcqpqrlpa nysqvhhlpp
     1321 qssvarhpsr eqlidylmlk vahqppytqs qcsprqshel akqeirvrvd kdpelgfsis
     1381 ggvggrgnpf rpeddgifvt rvqpdgpask llqpgdkiiq angysfinid hgqavsllkt
     1441 fqnaveliiv revss
//
LOCUS       XP_041326514             672 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326514
VERSION     XP_041326514.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470580.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..672
                     /product="erbin isoform X6"
                     /calculated_mol_wt=76170
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          92..449
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..672
                     /gene="ERBIN"
                     /coded_by="XM_041470580.1:163..2181"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvleq eseelssdee mkmaemrppl ietsinqpkv valsnskkvp
      661 gqnfflvsed rh
//
LOCUS       XP_041326515             671 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041326515
VERSION     XP_041326515.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470581.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..671
                     /product="erbin isoform X7"
                     /calculated_mol_wt=76042
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          92..449
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          280..300
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..671
                     /gene="ERBIN"
                     /coded_by="XM_041470581.1:159..2174"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvlee seelssdeem kmaemrppli etsinqpkvv alsnskkvpg
      661 qnfflvsedr h
//
LOCUS       XP_041326516             659 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326516
VERSION     XP_041326516.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470582.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..659
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..659
                     /product="erbin isoform X8"
                     /calculated_mol_wt=74699
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          92..449
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..659
                     /gene="ERBIN"
                     /coded_by="XM_041470582.1:162..2141"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvleq eseelssdee mkmaemrppl ietsinqpkv valsnskkr
//
LOCUS       XP_041326517             658 aa            linear   VRT 06-MAY-2021
DEFINITION  erbin isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041326517
VERSION     XP_041326517.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470583.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..658
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..658
                     /product="erbin isoform X9"
                     /calculated_mol_wt=74571
     Region          49..72
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          73..95
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          92..449
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          96..118
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          119..164
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          142..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          165..187
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          188..210
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          211..233
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          234..256
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          257..279
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..325
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          326..348
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          373..394
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     Region          395..408
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275378"
     CDS             1..658
                     /gene="ERBIN"
                     /coded_by="XM_041470583.1:158..2134"
                     /db_xref="GeneID:121355298"
ORIGIN      
        1 msqnvdfess gkkqqgeesn tvclkmttkr nlflrlvpcr clrgeeetvt tldyshcsle
       61 qvpkeifafe ktleelylda nqieelpkql fncqslhkls lpdndlttlp asianlinlr
      121 eldvskngiq efpeniknck vltvveasvn pisklpdgfs qllnltqlyl ndafleflpa
      181 nfgrltklqi lelrenqlki lpktmsrltq lerldlgsne ftevpevleq lsglkefwmd
      241 gnrltlipgf igtlkqltyl dvsknnievv eegisgcesl qdlllssnsl qqlpesigsl
      301 kkvttlkide nqliylpdsi gglisveeld csfneietlp ssvgqllnir tfaadhnflt
      361 qlpseignwk hvtvlflhsn kleflpeemg dmqklkvinl sdnrlknlpf tftklqqlta
      421 mwlsdnqskp liplqkeadp dtqktvltny mfpqqprtee vmfisdnesf npslweeqrk
      481 qraqvafecd edkdereapp regnlkrypt pypdelknmv ktvqtivhrl kdeestddna
      541 keskrevqtv svkdvgvkts eigsiknkad erkqysagss vqkpsepeae hstansqmta
      601 lvktlqntkt tvnhedvlee seelssdeem kmaemrppli etsinqpkvv alsnskkr
//
LOCUS       XP_041326518             580 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 38 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326518
VERSION     XP_041326518.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470584.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..580
                     /product="kelch-like protein 38 isoform X1"
                     /calculated_mol_wt=66098
     Region          11..139
                     /region_name="BTB_POZ_KLHL38"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 38 (KLHL38); cd18268"
                     /db_xref="CDD:349577"
     Region          25..499
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          131..229
                     /region_name="BACK_KLHL38"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 38 (KLHL38); cd18476"
                     /db_xref="CDD:350551"
     Region          322..370
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          373..417
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          421..508
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          510..560
                     /region_name="Kelch_1"
                     /note="Kelch motif; pfam01344"
                     /db_xref="CDD:396078"
     Region          511..561
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..580
                     /gene="KLHL38"
                     /coded_by="XM_041470584.1:371..2113"
                     /db_xref="GeneID:121355300"
ORIGIN      
        1 meegsteefl fkdqdfssel lrqlnalrqs rmltdvtlcs ggfeipchrn vlassspyfk
       61 amfcnnfres hqpkvilkgi dadildqiil yvytgeilis tenvlcllet asmlqynklf
      121 eacstylqdk ltpdnclsmi rlakilncqs lnkkakamal kcfplvasse dlkdlcpmel
      181 idylgddelc geeeqvfeal mvwirhdlqa rqgyipelfk kvrlqyvhpt flfhfiands
      241 lvqasptcrs ilesarrhmf slystntpdi kpmmhvprry snqefliivg grkdsqqttr
      301 dvllyddktn qwlslaklpm rlykasavsl hsnifvlggm pvsnkkslvs gniyiyslkl
      361 nqwrliehml vpryshrsla yknyilsfgg igenqeilns verydsvynt cesmanmpva
      421 vlhpavaakd qrvylfgged imqnpvrliq vyhvsrntwf rmetrvvknv capavvigdq
      481 iiivggytrr iiaydtkgnk fvkcadmkdr rmhhgatvik nklyvtggrc ltsdnvikdl
      541 dsldcydpet dtwtpkgklp hklfdhgclt lqcvpcsnll
//
LOCUS       XP_041326519             580 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 38 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326519
VERSION     XP_041326519.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470585.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..580
                     /product="kelch-like protein 38 isoform X1"
                     /calculated_mol_wt=66098
     Region          11..139
                     /region_name="BTB_POZ_KLHL38"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in Kelch-like
                     protein 38 (KLHL38); cd18268"
                     /db_xref="CDD:349577"
     Region          25..499
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          131..229
                     /region_name="BACK_KLHL38"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 38 (KLHL38); cd18476"
                     /db_xref="CDD:350551"
     Region          322..370
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          373..417
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          421..508
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          510..560
                     /region_name="Kelch_1"
                     /note="Kelch motif; pfam01344"
                     /db_xref="CDD:396078"
     Region          511..561
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..580
                     /gene="KLHL38"
                     /coded_by="XM_041470585.1:341..2083"
                     /db_xref="GeneID:121355300"
ORIGIN      
        1 meegsteefl fkdqdfssel lrqlnalrqs rmltdvtlcs ggfeipchrn vlassspyfk
       61 amfcnnfres hqpkvilkgi dadildqiil yvytgeilis tenvlcllet asmlqynklf
      121 eacstylqdk ltpdnclsmi rlakilncqs lnkkakamal kcfplvasse dlkdlcpmel
      181 idylgddelc geeeqvfeal mvwirhdlqa rqgyipelfk kvrlqyvhpt flfhfiands
      241 lvqasptcrs ilesarrhmf slystntpdi kpmmhvprry snqefliivg grkdsqqttr
      301 dvllyddktn qwlslaklpm rlykasavsl hsnifvlggm pvsnkkslvs gniyiyslkl
      361 nqwrliehml vpryshrsla yknyilsfgg igenqeilns verydsvynt cesmanmpva
      421 vlhpavaakd qrvylfgged imqnpvrliq vyhvsrntwf rmetrvvknv capavvigdq
      481 iiivggytrr iiaydtkgnk fvkcadmkdr rmhhgatvik nklyvtggrc ltsdnvikdl
      541 dsldcydpet dtwtpkgklp hklfdhgclt lqcvpcsnll
//
LOCUS       XP_041326520             457 aa            linear   VRT 06-MAY-2021
DEFINITION  kelch-like protein 38 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326520
VERSION     XP_041326520.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470586.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..457
                     /product="kelch-like protein 38 isoform X2"
                     /calculated_mol_wt=52184
     Region          11..139
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          25..445
                     /region_name="PHA03098"
                     /note="kelch-like protein; Provisional"
                     /db_xref="CDD:222983"
     Region          131..229
                     /region_name="BACK_KLHL38"
                     /note="BACK (BTB and C-terminal Kelch) domain found in
                     Kelch-like protein 38 (KLHL38); cd18476"
                     /db_xref="CDD:350551"
     Region          328..385
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     Region          388..438
                     /region_name="KELCH repeat"
                     /note="KELCH repeat [structural motif]"
                     /db_xref="CDD:276965"
     CDS             1..457
                     /gene="KLHL38"
                     /coded_by="XM_041470586.1:371..1744"
                     /db_xref="GeneID:121355300"
ORIGIN      
        1 meegsteefl fkdqdfssel lrqlnalrqs rmltdvtlcs ggfeipchrn vlassspyfk
       61 amfcnnfres hqpkvilkgi dadildqiil yvytgeilis tenvlcllet asmlqynklf
      121 eacstylqdk ltpdnclsmi rlakilncqs lnkkakamal kcfplvasse dlkdlcpmel
      181 idylgddelc geeeqvfeal mvwirhdlqa rqgyipelfk kvrlqyvhpt flfhfiands
      241 lvqasptcrs ilesarrhmf slystntpdi kpmmhvprry snqefliivg grkdsqqttr
      301 dvllyddktn qwlslaklpm rlykasavyh vsrntwfrme trvvknvcap avvigdqiii
      361 vggytrriia ydtkgnkfvk cadmkdrrmh hgatviknkl yvtggrclts dnvikdldsl
      421 dcydpetdtw tpkgklphkl fdhgcltlqc vpcsnll
//
LOCUS       XP_041326521             923 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-6 receptor subunit beta isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326521
VERSION     XP_041326521.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470587.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..923
                     /product="interleukin-6 receptor subunit beta isoform X1"
                     /calculated_mol_wt=102757
     Region          29..115
                     /region_name="Lep_receptor_Ig"
                     /note="Ig-like C2-type domain; pfam06328"
                     /db_xref="CDD:461878"
     Region          127..225
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          232..330
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(232,300,315)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(319..320,322..323)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          355..424
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          <407..>608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(420..421,423..424)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          528..609
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(528,593,608)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     CDS             1..923
                     /gene="IL6ST"
                     /coded_by="XM_041470587.1:123..2894"
                     /db_xref="GeneID:121355302"
ORIGIN      
        1 mfsrwnwvac gfclmlnics pdasgglvqs cghiipespv lalgsnftal cilnescldf
       61 gniyasqiiw kiknrlvpke qyreinrtvs svtfndtssl atpltcnila dgqieqniyg
      121 itvtvglape kpknlscivh qvsrftyvmt ctwnpgrhtf ldtqfrlkyk wlryrwpeei
      181 fpdcipkdvn nsctitdtqf fvnteiwvea tnalgkaesd hlvvdpidiv kplspqnvsi
      241 tsgllptvlq lcwenwisya vmtlkfniry kivgdtnwve vppedtaspr tsfsvqglrp
      301 yteyvfsirc mkedgagyws dwseektgit tedlpskgpp vwriidtshs pafwtvhlvw
      361 kalkpfeang vilqyeltvr dksslsspvk kcnvtstnht lqlregtyev tliarnsvga
      421 sppsvllipa snskapvknl rtlpkddklw vgwtapnsyv lkyviewclv ssssdciiew
      481 qialgdvqgi dlkgikpfkc ylitvyplya dgqgsgqsvk aylkqdrpsk gptvqtkkvg
      541 kaeavltwnh ltveeqngfi rnytilykti dgnetvvtvd pskteytlss ltsdtlytvr
      601 mmastdngsr tgpdftfttq kfgkgeieai vvpvclafll ivllgvlfcf nkrdlikkhi
      661 wpivpdpsks niaqwspqvp pkhnfsskdq mypegsftdv svveieaddk ksfseqdlkp
      721 fdllkkekst seghssgigg sscmssprqs vsdsdegett qntsstvqys tvvlngyrdq
      781 tpvqvfsrse stqplldsee rsedhaggad staqrqqyfr qnggqdetnt drpcferakq
      841 ithanegdlv gfvqlqisgq ssqplglgme kntqeaavsn vlqtctegqt vrpetveenp
      901 lsvdempksy lpqtvrqggy mpq
//
LOCUS       XP_041326522             923 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-6 receptor subunit beta isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326522
VERSION     XP_041326522.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470588.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..923
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..923
                     /product="interleukin-6 receptor subunit beta isoform X1"
                     /calculated_mol_wt=102757
     Region          29..115
                     /region_name="Lep_receptor_Ig"
                     /note="Ig-like C2-type domain; pfam06328"
                     /db_xref="CDD:461878"
     Region          127..225
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          232..330
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(232,300,315)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(319..320,322..323)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          355..424
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          <407..>608
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(420..421,423..424)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          528..609
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(528,593,608)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     CDS             1..923
                     /gene="IL6ST"
                     /coded_by="XM_041470588.1:151..2922"
                     /db_xref="GeneID:121355302"
ORIGIN      
        1 mfsrwnwvac gfclmlnics pdasgglvqs cghiipespv lalgsnftal cilnescldf
       61 gniyasqiiw kiknrlvpke qyreinrtvs svtfndtssl atpltcnila dgqieqniyg
      121 itvtvglape kpknlscivh qvsrftyvmt ctwnpgrhtf ldtqfrlkyk wlryrwpeei
      181 fpdcipkdvn nsctitdtqf fvnteiwvea tnalgkaesd hlvvdpidiv kplspqnvsi
      241 tsgllptvlq lcwenwisya vmtlkfniry kivgdtnwve vppedtaspr tsfsvqglrp
      301 yteyvfsirc mkedgagyws dwseektgit tedlpskgpp vwriidtshs pafwtvhlvw
      361 kalkpfeang vilqyeltvr dksslsspvk kcnvtstnht lqlregtyev tliarnsvga
      421 sppsvllipa snskapvknl rtlpkddklw vgwtapnsyv lkyviewclv ssssdciiew
      481 qialgdvqgi dlkgikpfkc ylitvyplya dgqgsgqsvk aylkqdrpsk gptvqtkkvg
      541 kaeavltwnh ltveeqngfi rnytilykti dgnetvvtvd pskteytlss ltsdtlytvr
      601 mmastdngsr tgpdftfttq kfgkgeieai vvpvclafll ivllgvlfcf nkrdlikkhi
      661 wpivpdpsks niaqwspqvp pkhnfsskdq mypegsftdv svveieaddk ksfseqdlkp
      721 fdllkkekst seghssgigg sscmssprqs vsdsdegett qntsstvqys tvvlngyrdq
      781 tpvqvfsrse stqplldsee rsedhaggad staqrqqyfr qnggqdetnt drpcferakq
      841 ithanegdlv gfvqlqisgq ssqplglgme kntqeaavsn vlqtctegqt vrpetveenp
      901 lsvdempksy lpqtvrqggy mpq
//
LOCUS       XP_041326524             918 aa            linear   VRT 06-MAY-2021
DEFINITION  interleukin-6 receptor subunit beta isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326524
VERSION     XP_041326524.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470590.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..918
                     /product="interleukin-6 receptor subunit beta isoform X2"
                     /calculated_mol_wt=101982
     Region          29..115
                     /region_name="Lep_receptor_Ig"
                     /note="Ig-like C2-type domain; pfam06328"
                     /db_xref="CDD:461878"
     Region          127..220
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cl21522"
                     /db_xref="CDD:473895"
     Region          227..325
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(227,295,310)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     Site            order(314..315,317..318)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          350..419
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Region          <402..>603
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Site            order(415..416,418..419)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          523..604
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; smart00060"
                     /db_xref="CDD:214495"
     Site            order(523,588,603)
                     /site_type="active"
                     /note="Interdomain contacts [active]"
                     /db_xref="CDD:238020"
     CDS             1..918
                     /gene="IL6ST"
                     /coded_by="XM_041470590.1:123..2879"
                     /db_xref="GeneID:121355302"
ORIGIN      
        1 mfsrwnwvac gfclmlnics pdasgglvqs cghiipespv lalgsnftal cilnescldf
       61 gniyasqiiw kiknrlvpke qyreinrtvs svtfndtssl atpltcnila dgqieqniyg
      121 itvtvglape kpknlscivh qvsrftyvmt ctwnpgrhtf ldtqfrlkyk wpeeifpdci
      181 pkdvnnscti tdtqffvnte iwveatnalg kaesdhlvvd pidivkplsp qnvsitsgll
      241 ptvlqlcwen wisyavmtlk fnirykivgd tnwvevpped tasprtsfsv qglrpyteyv
      301 fsircmkedg agywsdwsee ktgittedlp skgppvwrii dtshspafwt vhlvwkalkp
      361 feangvilqy eltvrdkssl sspvkkcnvt stnhtlqlre gtyevtliar nsvgasppsv
      421 llipasnska pvknlrtlpk ddklwvgwta pnsyvlkyvi ewclvssssd ciiewqialg
      481 dvqgidlkgi kpfkcylitv yplyadgqgs gqsvkaylkq drpskgptvq tkkvgkaeav
      541 ltwnhltvee qngfirnyti lyktidgnet vvtvdpskte ytlssltsdt lytvrmmast
      601 dngsrtgpdf tfttqkfgkg eieaivvpvc lafllivllg vlfcfnkrdl ikkhiwpivp
      661 dpsksniaqw spqvppkhnf sskdqmypeg sftdvsvvei eaddkksfse qdlkpfdllk
      721 kekstseghs sgiggsscms sprqsvsdsd egettqntss tvqystvvln gyrdqtpvqv
      781 fsrsestqpl ldseersedh aggadstaqr qqyfrqnggq detntdrpcf erakqithan
      841 egdlvgfvql qisgqssqpl glgmekntqe aavsnvlqtc tegqtvrpet veenplsvde
      901 mpksylpqtv rqggympq
//
LOCUS       XP_041326525             675 aa            linear   VRT 06-MAY-2021
DEFINITION  splicing regulatory glutamine/lysine-rich protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326525
VERSION     XP_041326525.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470591.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..675
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..675
                     /product="splicing regulatory glutamine/lysine-rich
                     protein 1 isoform X1"
                     /calculated_mol_wt=77308
     Region          20..99
                     /region_name="RRM1_SREK1"
                     /note="RNA recognition motif 1 (RRM1) found in splicing
                     regulatory glutamine/lysine-rich protein 1 (SREK1) and
                     similar proteins; cd12519"
                     /db_xref="CDD:409941"
     Region          178..263
                     /region_name="RRM2_SREK1"
                     /note="RNA recognition motif 2 (RRM2) found in splicing
                     regulatory glutamine/lysine-rich protein 1 (SREK1) and
                     similar proteins; cd12260"
                     /db_xref="CDD:409705"
     CDS             1..675
                     /gene="SREK1"
                     /coded_by="XM_041470591.1:258..2285"
                     /db_xref="GeneID:121355303"
ORIGIN      
        1 mmnsggigvp lgfplgptsv iqvtnlssav tseqmrtlfg flgdieelrl yppdnaplaf
       61 sskvcyikfr eassvgvaqh ltntvfidra livvpcaegk ipdeakalsl lapaptmtsl
      121 mpgagllpip tptplttlgv slgtlgaipa aaldpnital geipqppimg nvdpskidei
      181 rrtvyvgnln sqtttadqll effkqvgevk fvrmagdetq ptrfafvefa dqnsvprala
      241 fngvmfgdrp lkinhsnnai vkppemtpqa aakeleevmk rvreaqsfis aaiepesgks
      301 serkggrsrs hsrsesrsss ksrsrrkrsh skhrsrsgnr slsrhkdrrr srsplkkrsr
      361 sterrksrsr srsrdkkrdk ekikekekak ekekdrdrdk ekdrdrdkdr ererdkernr
      421 ekdkerdker skdrerardk drdkdkdrdk ekekdkdkek dkeevdhnke kedtekegek
      481 drekikdkeg dkdkggdkek drdkekekdg dkekereker ddkkkkdkrs rtpprsysss
      541 rrsrsssrer rkrksrspsk spktsktakr kssrtpsprr nkkekkrerd tnnerrerer
      601 stskkksske kegkeksdks tttlkdkdnn kedqnsetdk evdnrdtqrt devklqqngn
      661 cqpneenlsv kmeev
//
LOCUS       XP_041326526             559 aa            linear   VRT 06-MAY-2021
DEFINITION  splicing regulatory glutamine/lysine-rich protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326526
VERSION     XP_041326526.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470592.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="splicing regulatory glutamine/lysine-rich
                     protein 1 isoform X2"
                     /calculated_mol_wt=65048
     Region          62..147
                     /region_name="RRM2_SREK1"
                     /note="RNA recognition motif 2 (RRM2) found in splicing
                     regulatory glutamine/lysine-rich protein 1 (SREK1) and
                     similar proteins; cd12260"
                     /db_xref="CDD:409705"
     CDS             1..559
                     /gene="SREK1"
                     /coded_by="XM_041470592.1:4831..6510"
                     /db_xref="GeneID:121355303"
ORIGIN      
        1 mtslmpgagl lpiptptplt tlgvslgtlg aipaaaldpn italgeipqp pimgnvdpsk
       61 ideirrtvyv gnlnsqttta dqlleffkqv gevkfvrmag detqptrfaf vefadqnsvp
      121 ralafngvmf gdrplkinhs nnaivkppem tpqaaakele evmkrvreaq sfisaaiepe
      181 sgksserkgg rsrshsrses rsssksrsrr krshskhrsr sgnrslsrhk drrrsrsplk
      241 krsrsterrk srsrsrsrdk krdkekikek ekakekekdr drdkekdrdr dkdrererdk
      301 ernrekdker dkerskdrer ardkdrdkdk drdkekekdk dkekdkeevd hnkekedtek
      361 egekdrekik dkegdkdkgg dkekdrdkek ekdgdkeker ekerddkkkk dkrsrtpprs
      421 ysssrrsrss srerrkrksr spskspktsk takrkssrtp sprrnkkekk rerdtnnerr
      481 ererstskkk sskekegkek sdkstttlkd kdnnkedqns etdkevdnrd tqrtdevklq
      541 qngncqpnee nlsvkmeev
//
LOCUS       XP_041326527             559 aa            linear   VRT 06-MAY-2021
DEFINITION  splicing regulatory glutamine/lysine-rich protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326527
VERSION     XP_041326527.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470593.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="splicing regulatory glutamine/lysine-rich
                     protein 1 isoform X2"
                     /calculated_mol_wt=65048
     Region          62..147
                     /region_name="RRM2_SREK1"
                     /note="RNA recognition motif 2 (RRM2) found in splicing
                     regulatory glutamine/lysine-rich protein 1 (SREK1) and
                     similar proteins; cd12260"
                     /db_xref="CDD:409705"
     CDS             1..559
                     /gene="SREK1"
                     /coded_by="XM_041470593.1:312..1991"
                     /db_xref="GeneID:121355303"
ORIGIN      
        1 mtslmpgagl lpiptptplt tlgvslgtlg aipaaaldpn italgeipqp pimgnvdpsk
       61 ideirrtvyv gnlnsqttta dqlleffkqv gevkfvrmag detqptrfaf vefadqnsvp
      121 ralafngvmf gdrplkinhs nnaivkppem tpqaaakele evmkrvreaq sfisaaiepe
      181 sgksserkgg rsrshsrses rsssksrsrr krshskhrsr sgnrslsrhk drrrsrsplk
      241 krsrsterrk srsrsrsrdk krdkekikek ekakekekdr drdkekdrdr dkdrererdk
      301 ernrekdker dkerskdrer ardkdrdkdk drdkekekdk dkekdkeevd hnkekedtek
      361 egekdrekik dkegdkdkgg dkekdrdkek ekdgdkeker ekerddkkkk dkrsrtpprs
      421 ysssrrsrss srerrkrksr spskspktsk takrkssrtp sprrnkkekk rerdtnnerr
      481 ererstskkk sskekegkek sdkstttlkd kdnnkedqns etdkevdnrd tqrtdevklq
      541 qngncqpnee nlsvkmeev
//
LOCUS       XP_041326528             857 aa            linear   VRT 06-MAY-2021
DEFINITION  low-density lipoprotein receptor-related protein 12 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326528
VERSION     XP_041326528.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470594.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..857
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..857
                     /product="low-density lipoprotein receptor-related protein
                     12"
                     /calculated_mol_wt=93873
     Region          56..158
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(58,60,62,89,94,129,153,155,157..158)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          166..200
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(171,179,190..191)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(183,186,190,196..197)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            193..197
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          214..253
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(219,232,243..244)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(236,239,243,249..250)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            246..250
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          266..370
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(266,268,270,297,302,341,365,367,369..370)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          412..447
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(417,426,437..438)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(430,433,437,443..444)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            440..444
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     Region          450..484
                     /region_name="LDLa"
                     /note="Low Density Lipoprotein Receptor Class A domain, a
                     cysteine-rich repeat that plays a central role in
                     mammalian cholesterol metabolism; the receptor protein
                     binds LDL and transports it into cells by endocytosis; 7
                     successive cysteine-rich repeats of about...; cd00112"
                     /db_xref="CDD:238060"
     Site            order(455,463,474..475)
                     /site_type="active"
                     /note="putative binding surface [active]"
                     /db_xref="CDD:238060"
     Site            order(467,470,474,480..481)
                     /site_type="other"
                     /note="calcium-binding site [ion binding]"
                     /db_xref="CDD:238060"
     Site            477..481
                     /site_type="other"
                     /note="D-X-S-D-E motif"
                     /db_xref="CDD:238060"
     CDS             1..857
                     /gene="LRP12"
                     /coded_by="XM_041470594.1:147..2720"
                     /db_xref="GeneID:121355304"
ORIGIN      
        1 mapwgsaegs pawrsaqlll lvvsccgnga laehsenvhi sgvstacgdi peqirspsgt
       61 itspgwpsey parincswyi hanpgeiiti sfqdfdvqgs rrcssdwlti gsykniegyr
      121 acgssipspy issqdhvwir fhsddsisrk gfrlayfagk sdepscdcdq fhcangkcip
      181 eswkcnnmde cgdnsdeeic akanpptass fqpcaadqfq clsrftklyt clpeslkcdg
      241 nidcldlgde idcdvptcgq wlkyfygtfs spnypdfypp gsnctwlidt gdhrkvilrf
      301 tdfkldgtgy gdyvkiydgl eenprrllrv ltafdshapl tvvsssgqir vhfcadkvna
      361 argfnatyqv dgfclpweip cggnwgcyte qqrcdgywhc pngrdetnct mcqrdefpcs
      421 rngvcyprsd rcnyqnhcpn gsdekncffc qpgnfhcknn rcvfeswvcd sqddcgdgsd
      481 eencpvivpt rvitaavigs licglllvia lgctcklysl rmferrsfet hlsrveaell
      541 rreappsygq liaqglippv edfpvcspnq asvlenlrla vrsqlgftsi rlpiagrssn
      601 iwnrifnfar srhsgslalv sadgddvasq stsregernn thrslfsves ddtdtenerr
      661 dtagavggva atlpqkvppa taieatvgac gsssaqssss sttdggrevt sveppstspa
      721 rhqlssalsr mtqglrwvrf tlgrsssvnq nqsplrqldn gvsgreeddd vemlipvsdv
      781 asdfdmndcs rplldlssdq apglrqpyst thhsvrscsr dgpcescgiv htaqipdtcl
      841 eatvknetsd dealllc
//
LOCUS       XP_041326529             637 aa            linear   VRT 06-MAY-2021
DEFINITION  polyadenylate-binding protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326529
VERSION     XP_041326529.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470595.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..637
                     /product="polyadenylate-binding protein 1 isoform X1"
                     /calculated_mol_wt=70741
     Region          11..616
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     CDS             1..637
                     /gene="PABPC1"
                     /coded_by="XM_041470595.1:527..2440"
                     /db_xref="GeneID:121355305"
ORIGIN      
        1 mnpsapsypm aslyvgdlhp dvteamlyek fspagpilsi rvcrdmitrr slgyayvnfq
       61 qpadaerald tmnfdvikgk pvrimwsqrd pslrksgvgn ifiknldksi dnkalydtfs
      121 afgnilsckv vcdengskgy gfvhfetqea aeraiekmng mllndrkvfv grfksrkere
      181 aelgarakef tnvyiknfge dmdderlkel fgkfgpalsv kvmtdesgks kgfgfvsfer
      241 hedaqkavde mngkelngkq iyvgraqkkv erqtelkrkf eqmkqdritr yqgvnlyvkn
      301 lddgidderl rkefspfgti tsakvmmegg rskgfgfvcf sspeeatkav temngrivat
      361 kplyvalaqr keerqahltn qymqrmasvr avpnpvinpy qpappsgyfm aaipqtqnra
      421 ayyptnqlaq larpsprwta qgarphpfqn mpgairpaap rppfstmrpa ssqvprvmst
      481 qrvantstqt mgprpaaaat aatpavrtvp qykyaagvrn pqqhlntqpq vamqqpavhv
      541 qgqepltasm lasappqeqk qmlgerlfpl iqsmhptlag kitgmlleid nsellhmles
      601 peslrskvde avavlqahqa keaaqkavnn ptgvpsv
//
LOCUS       XP_041326530             575 aa            linear   VRT 06-MAY-2021
DEFINITION  polyadenylate-binding protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326530
VERSION     XP_041326530.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470596.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="polyadenylate-binding protein 1 isoform X2"
                     /calculated_mol_wt=63808
     Region          3..554
                     /region_name="PABP-1234"
                     /note="polyadenylate binding protein, human types 1, 2, 3,
                     4 family; TIGR01628"
                     /db_xref="CDD:130689"
     CDS             1..575
                     /gene="PABPC1"
                     /coded_by="XM_041470596.1:18..1745"
                     /db_xref="GeneID:121355305"
ORIGIN      
        1 maaeraldtm nfdvikgkpv rimwsqrdps lrksgvgnif iknldksidn kalydtfsaf
       61 gnilsckvvc dengskgygf vhfetqeaae raiekmngml lndrkvfvgr fksrkereae
      121 lgarakeftn vyiknfgedm dderlkelfg kfgpalsvkv mtdesgkskg fgfvsferhe
      181 daqkavdemn gkelngkqiy vgraqkkver qtelkrkfeq mkqdritryq gvnlyvknld
      241 dgidderlrk efspfgtits akvmmeggrs kgfgfvcfss peeatkavte mngrivatkp
      301 lyvalaqrke erqahltnqy mqrmasvrav pnpvinpyqp appsgyfmaa ipqtqnraay
      361 yptnqlaqla rpsprwtaqg arphpfqnmp gairpaaprp pfstmrpass qvprvmstqr
      421 vantstqtmg prpaaaataa tpavrtvpqy kyaagvrnpq qhlntqpqva mqqpavhvqg
      481 qepltasmla sappqeqkqm lgerlfpliq smhptlagki tgmlleidns ellhmlespe
      541 slrskvdeav avlqahqake aaqkavnnpt gvpsv
//
LOCUS       XP_041326531             445 aa            linear   VRT 06-MAY-2021
DEFINITION  DDB1- and CUL4-associated factor 13 [Pyrgilauda ruficollis].
ACCESSION   XP_041326531
VERSION     XP_041326531.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470597.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..445
                     /product="DDB1- and CUL4-associated factor 13"
                     /calculated_mol_wt=51509
     Region          62..353
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(65,84,88,94..95,107..108,126,130,136..137,155,172,
                     177,183..184,212,218,224..225,236..237,255,260,266..267,
                     280..281,298,303,309..310,321,342,346,352..353)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          70..107
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          112..154
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          162..197
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          199..236
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          244..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          285..309
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          328..359
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          354..440
                     /region_name="Sof1"
                     /note="Sof1-like domain; pfam04158"
                     /db_xref="CDD:427753"
     CDS             1..445
                     /gene="DCAF13"
                     /coded_by="XM_041470597.1:23..1360"
                     /db_xref="GeneID:121355306"
ORIGIN      
        1 mrvkvlsrnp ddyvrdtkld lqrvprnydp alhpfevare ytralnatkl ervfakpfls
       61 sldghrdgvn cmakhpksls tvlsgacdge vkiwnltkrq cirtiqaheg fvrgmcarfc
      121 gtsfftvgdd ktvkqwkmes peygeeeepi htilgktvyt gidhhwkepv fatcghqvdi
      181 wdeqrtspkc sltwgfdsis svkfnpiety llgscasdrn ivlydmrkst plkkvilnmr
      241 tntlcwnpme afiftaaned ynlytfdmrf lespvmvhmd hvsavldvdy sptgkefvsa
      301 sfdksirifp vdkghsrevy htkrmqhvit vkwtsdnkyi lcgsdemnir lwkanasekl
      361 gvlaprekaa mnynqklkek fqfhpqirri aqhrhlpksi ycqikeqrim rearrrkeln
      421 rrkhskpgsv plvperkkhi vavvk
//
LOCUS       XP_041326532             347 aa            linear   VRT 06-MAY-2021
DEFINITION  mitochondrial folate transporter/carrier [Pyrgilauda ruficollis].
ACCESSION   XP_041326532
VERSION     XP_041326532.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470598.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..347
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..347
                     /product="mitochondrial folate transporter/carrier"
                     /calculated_mol_wt=38598
     Region          58..320
                     /region_name="PTZ00169"
                     /note="ADP/ATP transporter on adenylate translocase;
                     Provisional"
                     /db_xref="CDD:240302"
     CDS             1..347
                     /gene="SLC25A32"
                     /coded_by="XM_041470598.1:16..1059"
                     /db_xref="GeneID:121355308"
ORIGIN      
        1 mrrsgrsrar prapprprpp ararpamgaa gpacaarepl sgepalrsvl rhvrlenlaa
       61 gmsggvlatl alhpldlvki rfavsdglel rpkyngilhc mstvwkhegl rglyqgvtpn
      121 mvgagaswgl yfffynaika ykkegkmesl sasehlvsaa eagamtlcit npiwvtktrl
      181 vlqynagvdp skrqyrgmfd alikiykteg irglykgfvp glfgtshgal qfmayedlke
      241 rynkyrnrvs dtklntveyi mmaavskifa vvatypyqvv rarlqdqhnt ysgvfdvirr
      301 twrkegvhgf ykgiipnvir vtpaccitfv vyenvsgfll gfrkenn
//
LOCUS       XP_041326533             245 aa            linear   VRT 06-MAY-2021
DEFINITION  14-3-3 protein zeta/delta [Pyrgilauda ruficollis].
ACCESSION   XP_041326533
VERSION     XP_041326533.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470599.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="14-3-3 protein zeta/delta"
                     /calculated_mol_wt=27644
     Region          2..230
                     /region_name="14-3-3_beta_zeta"
                     /note="14-3-3 beta and zeta isoforms of 14-3-3 protein;
                     cd10022"
                     /db_xref="CDD:206758"
     Site            order(5,8..9,12..13,15..16,18,21,58,61,65,75,78..79,82,
                     85..86,89)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206758"
     Site            order(41..42,45..46,49,117,120,127..128,165,169,172..173,
                     176,209..213,216..217,220,224)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206758"
     CDS             1..245
                     /gene="YWHAZ"
                     /coded_by="XM_041470599.1:396..1133"
                     /db_xref="GeneID:121355309"
ORIGIN      
        1 mdknelvqka klaeqaeryd dmascmksvt eqgaelsnee rnllsvaykn vvgarrsswr
       61 vvssieqkte gaekkqqmar eyrekietel rdicndvlsl lekflipnas qaeskvfylk
      121 mkgdyyryla evaagddkkg iveqsqqayq eafeiskkem qpthpirlgl alnfsvfyye
      181 ilnspekacs laktafdeai aeldtlsees ykdstlimql lrdnltlwts dtqgdeaeag
      241 eggen
//
LOCUS       XP_041326534             245 aa            linear   VRT 06-MAY-2021
DEFINITION  14-3-3 protein zeta/delta [Pyrgilauda ruficollis].
ACCESSION   XP_041326534
VERSION     XP_041326534.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470600.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..245
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..245
                     /product="14-3-3 protein zeta/delta"
                     /calculated_mol_wt=27644
     Region          2..230
                     /region_name="14-3-3_beta_zeta"
                     /note="14-3-3 beta and zeta isoforms of 14-3-3 protein;
                     cd10022"
                     /db_xref="CDD:206758"
     Site            order(5,8..9,12..13,15..16,18,21,58,61,65,75,78..79,82,
                     85..86,89)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:206758"
     Site            order(41..42,45..46,49,117,120,127..128,165,169,172..173,
                     176,209..213,216..217,220,224)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:206758"
     CDS             1..245
                     /gene="YWHAZ"
                     /coded_by="XM_041470600.1:147..884"
                     /db_xref="GeneID:121355309"
ORIGIN      
        1 mdknelvqka klaeqaeryd dmascmksvt eqgaelsnee rnllsvaykn vvgarrsswr
       61 vvssieqkte gaekkqqmar eyrekietel rdicndvlsl lekflipnas qaeskvfylk
      121 mkgdyyryla evaagddkkg iveqsqqayq eafeiskkem qpthpirlgl alnfsvfyye
      181 ilnspekacs laktafdeai aeldtlsees ykdstlimql lrdnltlwts dtqgdeaeag
      241 eggen
//
LOCUS       XP_041326536            4029 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326536
VERSION     XP_041326536.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470602.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4029
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X1"
                     /calculated_mol_wt=448076
     Region          2..103
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          <2640..>2727
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3457..3865
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3618..3739
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..4029
                     /gene="VPS13B"
                     /coded_by="XM_041470602.1:199..12288"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mlesyvtpil msyvnryikn lkpsdlqlsl wggdvvlskl elkldvleqe lklpftflsg
       61 hihelrihvp wtklgsepvv itintmecil klkdgaqqed hescgssstn rstteslksa
      121 vksrrvqqsa spdpdlppgy vqslirrvvn nvnivinnli lkyveddivl svnitsaecy
      181 tvdefwdraf mdisatdlvl rkminfsdct vcldkrnasg kiefyqepll ykcsfrtrlh
      241 ftydnlnskm psiikihtlv eslklsisdq qlpmfirimq lgialyygei gsfkdgesed
      301 lichtkdmlg nitgtedeas svmqyptqyi sqdpyfhqdd dqqqgwvswa wsfvpaivsy
      361 ddeengsggi gdgtaeqqks qslkdpvisv gfyctkatvt fkltemqaes syyspqkvks
      421 kevicweqeg ttvevlmkge lffdcqigfv gcqamclkgi mgikdfeenm nrsdeeacff
      481 scgenlsvkg mtyltnslfd yrspennsir aefildaahh ketyteiagm qrfgafymdy
      541 lytmestggk vsgnqqdlss vksedfgnvq emstkslivg plnlrldssa vhrimkmivc
      601 aleheyepys rtkpditdgs rtmpsseeva sleeyiptrl ttftvlkcti iipaaefnll
      661 dhllpiimge knlsgllnaa sfqplrplps irilvdkvnl ehsvpmyaeq lvhvvsslsq
      721 psdnllhycy shcylkifgf qaaltsldsk glycipvpvi psfstavygk likfpkywsk
      781 rahvplteci felpnltiqa traqtlllqt iyqswchpvg nvssvvvnea llnevfqtsg
      841 vksknplptl egsiqnvelk ycgtslvkca sgtvgsikic akapgdggke klipliqgps
      901 dtrdlhsskw lnesrkpesl lapdlvafti qipqymdych nsgavllssv qglainvdpv
      961 lytwliyqpq krvsrhiqqq svgavplgvs vtrkkedeas vgsaplarqq snqaseyass
     1021 pvktktvtes rplslpvktv lnssencrsp eermkefiai vwnavkcltl qlevqsccvf
     1081 lpndslpsps tivsgdipgt vrnwyhgqas mpgtlvvclp qikimsaghk hmeplqeipf
     1141 vvlrpileeg dafpwtislh hfsvytllgq qmtlnlvepm gctstlavts qkllasgpes
     1201 rhsfvvclhv dlesleikcs npqvqllyel aeitskvwnk iqrkgvlyqs vssvctetit
     1261 gpvppsspvk ssvgtippdt styspsadig tttegdslqg gddspfsdsi tleqttsnig
     1321 vssgrvslwm qwmlpkitvk lfapdprnng tevcivsele dlsasvdmqd vytkikckie
     1381 sfnidhyrns lgedswslgq yggvflsctd klnrrtllvr piskqdpfnn fsgffpstta
     1441 klldgshqqh gflsltytka vtknvrhkli srnerrtfhk lseghtdgsp hflheillsa
     1501 qafdvvlcfp llnaiasifq arlprsqkek rkspgqpmrt haltsrnlpl iyintgvirv
     1561 ffpkneedhh iaeanpsike dtlvlkigsv smapqadnpl sravlrkdiy qralnlgilr
     1621 dpgsevedrq yqidlqsini gtaywnqlkp ekengkggvl teternsqnp alewnmassi
     1681 rrhqerrail tpiltdftvr itaapaiift kidaaenlht eeilvcghsl evnmttsldf
     1741 flnvaqvqll qqlvqanmvg leasssttev skqeqkkmdv adggtvetss rysgaqdsgi
     1801 gsdsvkirii qieqhsgtsq hriarpsrqs sivknlnfip fdifvtasri slmtysctas
     1861 pksksvqdqk dgekmskssl nlpetvsgss hdtkkpsqpc issvtaddll nsnpplsagr
     1921 kpgllslesl hastrssarq algitivrqp grrgagdiel qpflylvlsq psvllschhr
     1981 kqkveisvfd aglkgvasdy kctdpgktlp ealdyckiwl qtvagevdak sgippplitv
     2041 qikdflngpa dinvdiskpl kanlsfarfd qinqflkkii ttnedvsrke aassagiipd
     2101 editlisrhp stkdflpaah tstvqkasmq enlwqalscf qkisihtvqm vvlmetiphp
     2161 skpcllvsfs nlsgslniks ghktagihgs slvldikdfl lktslkerak sligpfccsv
     2221 nveakwckhs gdpgpeqsvp kiyidlrggl lqvfwgqehl nclvllqell wqylskkgsv
     2281 etliaerthp kcfsaernpa skpehtsddl rtglfqyiqd aeaqklpnay evvfyneted
     2341 spgmmlwryp eprvltlvki npvpfntted pdistadlgd vlqvpcsley wdelqksfva
     2401 frefslsesk vcelqlpsis lvndqkelia sdlwrivlns sqnvaddqss esesgsqsvc
     2461 dqlvtptala actrvdscft pwfvpslsvl iqftclevhl chhldqlgta ppkflqpfls
     2521 dknmpseley mivsfdephv ylrqwndesv fqeiqfstqa dckllecrnv tmqsvvkpfk
     2581 iwgqiavsss tagrlfdcti mvdpifisfg qyalhslnta iqawqqnrcp eaeefvfshf
     2641 vicndtqetl rfgqvdtden illatlhshq yswrshkspq llhiciegwg nwrwsepfsv
     2701 dntgtfirti qykgrtasli ikvqqlsgvq kqilicgrqt fcsylsesie lkvvqhyisq
     2761 dgqavvkehi nclaakqklp syilennelt elsvkstgde dwsqdvclss khtehstviq
     2821 vpssnssity vwctvltlep nshvqqrliv fsplfivrsh lpdpiilhie krslglnetq
     2881 vipgkgqeka lqniepdlth hltfqareed dpsecavpis ttlikqiatk sspggsvsqv
     2941 lsefygiasp pqpawpynrk dsdsneqlsq wdspmrvkls lwkpyvrtll iellpwalli
     3001 nqskwdlwlf egekivlqvp sgkviippnf eeafqvgiyw antntvhksv aiklvhnvts
     3061 pkwkdadnge vvtldeegfv eaeiklgafp ghqklcefci ssmvrqgiqi lqiedkttii
     3121 ndtsyqiyyr pqlviskshs eeedfqcpdg avfslgpaga gcseapsavp cwdllwepga
     3181 saagpslgdr rlvlgfssag srslwslpaa vsaelarqsv avptgaraes gfctraialt
     3241 yqehlgvtyl tltedpspri iihnrcsipl lvkenfkdtp kfevycrkip aecsvhhely
     3301 hqissypdck trdllpsill kvvssdelvn ewsdvvdinn qgtqivfltg fgcvyvdith
     3361 hcgtivitla pegragpagi nlnrsqeqtl slkmfisqls laafdditnh kvssellrlt
     3421 adnvflhmap gtsslsqefq qdsveglpqf hslqvycedl qldnqlysks nfhfavllcq
     3481 eektetaqws rmnnlivcnk dlesykencf iklciafsee enfmfhvndl sfelkparly
     3541 vedtfvyyik tlfdtylpen ktacksmnas dttlivpeqv reharalvkp vklrrlkiqp
     3601 vnllvsihas lklyiasdht plsfsvferg pifttarqlv halamhyaag alfragwvvg
     3661 sleilgspas lvrsigngia dffrlpyegl trgpgafvsg vsrgttsfvk hiskgtltsi
     3721 tnlatslarn mdrlsldeeh ynrqeewrrq lpeslgeglr qglsrlgisl lgaiagivdq
     3781 pmrnfqrvse aqasaghkar gvisgvgkgi mgvftkpigg aaelvsqtgy gilhgaglsq
     3841 lpkqrsrpnd qhveqapnsh vkyvwkmlqs lgrpevhmal dvmivsgsgq qhegclllts
     3901 evlfvvsise dtqqqafpvt eidcleddqq kdllkvqlkq qrvpsdleae garerlseqq
     3961 ynrlveyitk tschlapsta aapapqavaa eqpltitkty qyvvdpnfaq vfiskftmvk
     4021 nkalrkgfn
//
LOCUS       XP_041326537            4029 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326537
VERSION     XP_041326537.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470603.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4029
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X1"
                     /calculated_mol_wt=448076
     Region          2..103
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          <2640..>2727
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3457..3865
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3618..3739
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..4029
                     /gene="VPS13B"
                     /coded_by="XM_041470603.1:50..12139"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mlesyvtpil msyvnryikn lkpsdlqlsl wggdvvlskl elkldvleqe lklpftflsg
       61 hihelrihvp wtklgsepvv itintmecil klkdgaqqed hescgssstn rstteslksa
      121 vksrrvqqsa spdpdlppgy vqslirrvvn nvnivinnli lkyveddivl svnitsaecy
      181 tvdefwdraf mdisatdlvl rkminfsdct vcldkrnasg kiefyqepll ykcsfrtrlh
      241 ftydnlnskm psiikihtlv eslklsisdq qlpmfirimq lgialyygei gsfkdgesed
      301 lichtkdmlg nitgtedeas svmqyptqyi sqdpyfhqdd dqqqgwvswa wsfvpaivsy
      361 ddeengsggi gdgtaeqqks qslkdpvisv gfyctkatvt fkltemqaes syyspqkvks
      421 kevicweqeg ttvevlmkge lffdcqigfv gcqamclkgi mgikdfeenm nrsdeeacff
      481 scgenlsvkg mtyltnslfd yrspennsir aefildaahh ketyteiagm qrfgafymdy
      541 lytmestggk vsgnqqdlss vksedfgnvq emstkslivg plnlrldssa vhrimkmivc
      601 aleheyepys rtkpditdgs rtmpsseeva sleeyiptrl ttftvlkcti iipaaefnll
      661 dhllpiimge knlsgllnaa sfqplrplps irilvdkvnl ehsvpmyaeq lvhvvsslsq
      721 psdnllhycy shcylkifgf qaaltsldsk glycipvpvi psfstavygk likfpkywsk
      781 rahvplteci felpnltiqa traqtlllqt iyqswchpvg nvssvvvnea llnevfqtsg
      841 vksknplptl egsiqnvelk ycgtslvkca sgtvgsikic akapgdggke klipliqgps
      901 dtrdlhsskw lnesrkpesl lapdlvafti qipqymdych nsgavllssv qglainvdpv
      961 lytwliyqpq krvsrhiqqq svgavplgvs vtrkkedeas vgsaplarqq snqaseyass
     1021 pvktktvtes rplslpvktv lnssencrsp eermkefiai vwnavkcltl qlevqsccvf
     1081 lpndslpsps tivsgdipgt vrnwyhgqas mpgtlvvclp qikimsaghk hmeplqeipf
     1141 vvlrpileeg dafpwtislh hfsvytllgq qmtlnlvepm gctstlavts qkllasgpes
     1201 rhsfvvclhv dlesleikcs npqvqllyel aeitskvwnk iqrkgvlyqs vssvctetit
     1261 gpvppsspvk ssvgtippdt styspsadig tttegdslqg gddspfsdsi tleqttsnig
     1321 vssgrvslwm qwmlpkitvk lfapdprnng tevcivsele dlsasvdmqd vytkikckie
     1381 sfnidhyrns lgedswslgq yggvflsctd klnrrtllvr piskqdpfnn fsgffpstta
     1441 klldgshqqh gflsltytka vtknvrhkli srnerrtfhk lseghtdgsp hflheillsa
     1501 qafdvvlcfp llnaiasifq arlprsqkek rkspgqpmrt haltsrnlpl iyintgvirv
     1561 ffpkneedhh iaeanpsike dtlvlkigsv smapqadnpl sravlrkdiy qralnlgilr
     1621 dpgsevedrq yqidlqsini gtaywnqlkp ekengkggvl teternsqnp alewnmassi
     1681 rrhqerrail tpiltdftvr itaapaiift kidaaenlht eeilvcghsl evnmttsldf
     1741 flnvaqvqll qqlvqanmvg leasssttev skqeqkkmdv adggtvetss rysgaqdsgi
     1801 gsdsvkirii qieqhsgtsq hriarpsrqs sivknlnfip fdifvtasri slmtysctas
     1861 pksksvqdqk dgekmskssl nlpetvsgss hdtkkpsqpc issvtaddll nsnpplsagr
     1921 kpgllslesl hastrssarq algitivrqp grrgagdiel qpflylvlsq psvllschhr
     1981 kqkveisvfd aglkgvasdy kctdpgktlp ealdyckiwl qtvagevdak sgippplitv
     2041 qikdflngpa dinvdiskpl kanlsfarfd qinqflkkii ttnedvsrke aassagiipd
     2101 editlisrhp stkdflpaah tstvqkasmq enlwqalscf qkisihtvqm vvlmetiphp
     2161 skpcllvsfs nlsgslniks ghktagihgs slvldikdfl lktslkerak sligpfccsv
     2221 nveakwckhs gdpgpeqsvp kiyidlrggl lqvfwgqehl nclvllqell wqylskkgsv
     2281 etliaerthp kcfsaernpa skpehtsddl rtglfqyiqd aeaqklpnay evvfyneted
     2341 spgmmlwryp eprvltlvki npvpfntted pdistadlgd vlqvpcsley wdelqksfva
     2401 frefslsesk vcelqlpsis lvndqkelia sdlwrivlns sqnvaddqss esesgsqsvc
     2461 dqlvtptala actrvdscft pwfvpslsvl iqftclevhl chhldqlgta ppkflqpfls
     2521 dknmpseley mivsfdephv ylrqwndesv fqeiqfstqa dckllecrnv tmqsvvkpfk
     2581 iwgqiavsss tagrlfdcti mvdpifisfg qyalhslnta iqawqqnrcp eaeefvfshf
     2641 vicndtqetl rfgqvdtden illatlhshq yswrshkspq llhiciegwg nwrwsepfsv
     2701 dntgtfirti qykgrtasli ikvqqlsgvq kqilicgrqt fcsylsesie lkvvqhyisq
     2761 dgqavvkehi nclaakqklp syilennelt elsvkstgde dwsqdvclss khtehstviq
     2821 vpssnssity vwctvltlep nshvqqrliv fsplfivrsh lpdpiilhie krslglnetq
     2881 vipgkgqeka lqniepdlth hltfqareed dpsecavpis ttlikqiatk sspggsvsqv
     2941 lsefygiasp pqpawpynrk dsdsneqlsq wdspmrvkls lwkpyvrtll iellpwalli
     3001 nqskwdlwlf egekivlqvp sgkviippnf eeafqvgiyw antntvhksv aiklvhnvts
     3061 pkwkdadnge vvtldeegfv eaeiklgafp ghqklcefci ssmvrqgiqi lqiedkttii
     3121 ndtsyqiyyr pqlviskshs eeedfqcpdg avfslgpaga gcseapsavp cwdllwepga
     3181 saagpslgdr rlvlgfssag srslwslpaa vsaelarqsv avptgaraes gfctraialt
     3241 yqehlgvtyl tltedpspri iihnrcsipl lvkenfkdtp kfevycrkip aecsvhhely
     3301 hqissypdck trdllpsill kvvssdelvn ewsdvvdinn qgtqivfltg fgcvyvdith
     3361 hcgtivitla pegragpagi nlnrsqeqtl slkmfisqls laafdditnh kvssellrlt
     3421 adnvflhmap gtsslsqefq qdsveglpqf hslqvycedl qldnqlysks nfhfavllcq
     3481 eektetaqws rmnnlivcnk dlesykencf iklciafsee enfmfhvndl sfelkparly
     3541 vedtfvyyik tlfdtylpen ktacksmnas dttlivpeqv reharalvkp vklrrlkiqp
     3601 vnllvsihas lklyiasdht plsfsvferg pifttarqlv halamhyaag alfragwvvg
     3661 sleilgspas lvrsigngia dffrlpyegl trgpgafvsg vsrgttsfvk hiskgtltsi
     3721 tnlatslarn mdrlsldeeh ynrqeewrrq lpeslgeglr qglsrlgisl lgaiagivdq
     3781 pmrnfqrvse aqasaghkar gvisgvgkgi mgvftkpigg aaelvsqtgy gilhgaglsq
     3841 lpkqrsrpnd qhveqapnsh vkyvwkmlqs lgrpevhmal dvmivsgsgq qhegclllts
     3901 evlfvvsise dtqqqafpvt eidcleddqq kdllkvqlkq qrvpsdleae garerlseqq
     3961 ynrlveyitk tschlapsta aapapqavaa eqpltitkty qyvvdpnfaq vfiskftmvk
     4021 nkalrkgfn
//
LOCUS       XP_041326538            4029 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326538
VERSION     XP_041326538.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470604.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4029
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X1"
                     /calculated_mol_wt=448076
     Region          2..103
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          <2640..>2727
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3457..3865
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3618..3739
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..4029
                     /gene="VPS13B"
                     /coded_by="XM_041470604.1:164..12253"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mlesyvtpil msyvnryikn lkpsdlqlsl wggdvvlskl elkldvleqe lklpftflsg
       61 hihelrihvp wtklgsepvv itintmecil klkdgaqqed hescgssstn rstteslksa
      121 vksrrvqqsa spdpdlppgy vqslirrvvn nvnivinnli lkyveddivl svnitsaecy
      181 tvdefwdraf mdisatdlvl rkminfsdct vcldkrnasg kiefyqepll ykcsfrtrlh
      241 ftydnlnskm psiikihtlv eslklsisdq qlpmfirimq lgialyygei gsfkdgesed
      301 lichtkdmlg nitgtedeas svmqyptqyi sqdpyfhqdd dqqqgwvswa wsfvpaivsy
      361 ddeengsggi gdgtaeqqks qslkdpvisv gfyctkatvt fkltemqaes syyspqkvks
      421 kevicweqeg ttvevlmkge lffdcqigfv gcqamclkgi mgikdfeenm nrsdeeacff
      481 scgenlsvkg mtyltnslfd yrspennsir aefildaahh ketyteiagm qrfgafymdy
      541 lytmestggk vsgnqqdlss vksedfgnvq emstkslivg plnlrldssa vhrimkmivc
      601 aleheyepys rtkpditdgs rtmpsseeva sleeyiptrl ttftvlkcti iipaaefnll
      661 dhllpiimge knlsgllnaa sfqplrplps irilvdkvnl ehsvpmyaeq lvhvvsslsq
      721 psdnllhycy shcylkifgf qaaltsldsk glycipvpvi psfstavygk likfpkywsk
      781 rahvplteci felpnltiqa traqtlllqt iyqswchpvg nvssvvvnea llnevfqtsg
      841 vksknplptl egsiqnvelk ycgtslvkca sgtvgsikic akapgdggke klipliqgps
      901 dtrdlhsskw lnesrkpesl lapdlvafti qipqymdych nsgavllssv qglainvdpv
      961 lytwliyqpq krvsrhiqqq svgavplgvs vtrkkedeas vgsaplarqq snqaseyass
     1021 pvktktvtes rplslpvktv lnssencrsp eermkefiai vwnavkcltl qlevqsccvf
     1081 lpndslpsps tivsgdipgt vrnwyhgqas mpgtlvvclp qikimsaghk hmeplqeipf
     1141 vvlrpileeg dafpwtislh hfsvytllgq qmtlnlvepm gctstlavts qkllasgpes
     1201 rhsfvvclhv dlesleikcs npqvqllyel aeitskvwnk iqrkgvlyqs vssvctetit
     1261 gpvppsspvk ssvgtippdt styspsadig tttegdslqg gddspfsdsi tleqttsnig
     1321 vssgrvslwm qwmlpkitvk lfapdprnng tevcivsele dlsasvdmqd vytkikckie
     1381 sfnidhyrns lgedswslgq yggvflsctd klnrrtllvr piskqdpfnn fsgffpstta
     1441 klldgshqqh gflsltytka vtknvrhkli srnerrtfhk lseghtdgsp hflheillsa
     1501 qafdvvlcfp llnaiasifq arlprsqkek rkspgqpmrt haltsrnlpl iyintgvirv
     1561 ffpkneedhh iaeanpsike dtlvlkigsv smapqadnpl sravlrkdiy qralnlgilr
     1621 dpgsevedrq yqidlqsini gtaywnqlkp ekengkggvl teternsqnp alewnmassi
     1681 rrhqerrail tpiltdftvr itaapaiift kidaaenlht eeilvcghsl evnmttsldf
     1741 flnvaqvqll qqlvqanmvg leasssttev skqeqkkmdv adggtvetss rysgaqdsgi
     1801 gsdsvkirii qieqhsgtsq hriarpsrqs sivknlnfip fdifvtasri slmtysctas
     1861 pksksvqdqk dgekmskssl nlpetvsgss hdtkkpsqpc issvtaddll nsnpplsagr
     1921 kpgllslesl hastrssarq algitivrqp grrgagdiel qpflylvlsq psvllschhr
     1981 kqkveisvfd aglkgvasdy kctdpgktlp ealdyckiwl qtvagevdak sgippplitv
     2041 qikdflngpa dinvdiskpl kanlsfarfd qinqflkkii ttnedvsrke aassagiipd
     2101 editlisrhp stkdflpaah tstvqkasmq enlwqalscf qkisihtvqm vvlmetiphp
     2161 skpcllvsfs nlsgslniks ghktagihgs slvldikdfl lktslkerak sligpfccsv
     2221 nveakwckhs gdpgpeqsvp kiyidlrggl lqvfwgqehl nclvllqell wqylskkgsv
     2281 etliaerthp kcfsaernpa skpehtsddl rtglfqyiqd aeaqklpnay evvfyneted
     2341 spgmmlwryp eprvltlvki npvpfntted pdistadlgd vlqvpcsley wdelqksfva
     2401 frefslsesk vcelqlpsis lvndqkelia sdlwrivlns sqnvaddqss esesgsqsvc
     2461 dqlvtptala actrvdscft pwfvpslsvl iqftclevhl chhldqlgta ppkflqpfls
     2521 dknmpseley mivsfdephv ylrqwndesv fqeiqfstqa dckllecrnv tmqsvvkpfk
     2581 iwgqiavsss tagrlfdcti mvdpifisfg qyalhslnta iqawqqnrcp eaeefvfshf
     2641 vicndtqetl rfgqvdtden illatlhshq yswrshkspq llhiciegwg nwrwsepfsv
     2701 dntgtfirti qykgrtasli ikvqqlsgvq kqilicgrqt fcsylsesie lkvvqhyisq
     2761 dgqavvkehi nclaakqklp syilennelt elsvkstgde dwsqdvclss khtehstviq
     2821 vpssnssity vwctvltlep nshvqqrliv fsplfivrsh lpdpiilhie krslglnetq
     2881 vipgkgqeka lqniepdlth hltfqareed dpsecavpis ttlikqiatk sspggsvsqv
     2941 lsefygiasp pqpawpynrk dsdsneqlsq wdspmrvkls lwkpyvrtll iellpwalli
     3001 nqskwdlwlf egekivlqvp sgkviippnf eeafqvgiyw antntvhksv aiklvhnvts
     3061 pkwkdadnge vvtldeegfv eaeiklgafp ghqklcefci ssmvrqgiqi lqiedkttii
     3121 ndtsyqiyyr pqlviskshs eeedfqcpdg avfslgpaga gcseapsavp cwdllwepga
     3181 saagpslgdr rlvlgfssag srslwslpaa vsaelarqsv avptgaraes gfctraialt
     3241 yqehlgvtyl tltedpspri iihnrcsipl lvkenfkdtp kfevycrkip aecsvhhely
     3301 hqissypdck trdllpsill kvvssdelvn ewsdvvdinn qgtqivfltg fgcvyvdith
     3361 hcgtivitla pegragpagi nlnrsqeqtl slkmfisqls laafdditnh kvssellrlt
     3421 adnvflhmap gtsslsqefq qdsveglpqf hslqvycedl qldnqlysks nfhfavllcq
     3481 eektetaqws rmnnlivcnk dlesykencf iklciafsee enfmfhvndl sfelkparly
     3541 vedtfvyyik tlfdtylpen ktacksmnas dttlivpeqv reharalvkp vklrrlkiqp
     3601 vnllvsihas lklyiasdht plsfsvferg pifttarqlv halamhyaag alfragwvvg
     3661 sleilgspas lvrsigngia dffrlpyegl trgpgafvsg vsrgttsfvk hiskgtltsi
     3721 tnlatslarn mdrlsldeeh ynrqeewrrq lpeslgeglr qglsrlgisl lgaiagivdq
     3781 pmrnfqrvse aqasaghkar gvisgvgkgi mgvftkpigg aaelvsqtgy gilhgaglsq
     3841 lpkqrsrpnd qhveqapnsh vkyvwkmlqs lgrpevhmal dvmivsgsgq qhegclllts
     3901 evlfvvsise dtqqqafpvt eidcleddqq kdllkvqlkq qrvpsdleae garerlseqq
     3961 ynrlveyitk tschlapsta aapapqavaa eqpltitkty qyvvdpnfaq vfiskftmvk
     4021 nkalrkgfn
//
LOCUS       XP_041326539            4029 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326539
VERSION     XP_041326539.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470605.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4029
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X1"
                     /calculated_mol_wt=448076
     Region          2..103
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          <2640..>2727
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3457..3865
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3618..3739
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..4029
                     /gene="VPS13B"
                     /coded_by="XM_041470605.1:63..12152"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mlesyvtpil msyvnryikn lkpsdlqlsl wggdvvlskl elkldvleqe lklpftflsg
       61 hihelrihvp wtklgsepvv itintmecil klkdgaqqed hescgssstn rstteslksa
      121 vksrrvqqsa spdpdlppgy vqslirrvvn nvnivinnli lkyveddivl svnitsaecy
      181 tvdefwdraf mdisatdlvl rkminfsdct vcldkrnasg kiefyqepll ykcsfrtrlh
      241 ftydnlnskm psiikihtlv eslklsisdq qlpmfirimq lgialyygei gsfkdgesed
      301 lichtkdmlg nitgtedeas svmqyptqyi sqdpyfhqdd dqqqgwvswa wsfvpaivsy
      361 ddeengsggi gdgtaeqqks qslkdpvisv gfyctkatvt fkltemqaes syyspqkvks
      421 kevicweqeg ttvevlmkge lffdcqigfv gcqamclkgi mgikdfeenm nrsdeeacff
      481 scgenlsvkg mtyltnslfd yrspennsir aefildaahh ketyteiagm qrfgafymdy
      541 lytmestggk vsgnqqdlss vksedfgnvq emstkslivg plnlrldssa vhrimkmivc
      601 aleheyepys rtkpditdgs rtmpsseeva sleeyiptrl ttftvlkcti iipaaefnll
      661 dhllpiimge knlsgllnaa sfqplrplps irilvdkvnl ehsvpmyaeq lvhvvsslsq
      721 psdnllhycy shcylkifgf qaaltsldsk glycipvpvi psfstavygk likfpkywsk
      781 rahvplteci felpnltiqa traqtlllqt iyqswchpvg nvssvvvnea llnevfqtsg
      841 vksknplptl egsiqnvelk ycgtslvkca sgtvgsikic akapgdggke klipliqgps
      901 dtrdlhsskw lnesrkpesl lapdlvafti qipqymdych nsgavllssv qglainvdpv
      961 lytwliyqpq krvsrhiqqq svgavplgvs vtrkkedeas vgsaplarqq snqaseyass
     1021 pvktktvtes rplslpvktv lnssencrsp eermkefiai vwnavkcltl qlevqsccvf
     1081 lpndslpsps tivsgdipgt vrnwyhgqas mpgtlvvclp qikimsaghk hmeplqeipf
     1141 vvlrpileeg dafpwtislh hfsvytllgq qmtlnlvepm gctstlavts qkllasgpes
     1201 rhsfvvclhv dlesleikcs npqvqllyel aeitskvwnk iqrkgvlyqs vssvctetit
     1261 gpvppsspvk ssvgtippdt styspsadig tttegdslqg gddspfsdsi tleqttsnig
     1321 vssgrvslwm qwmlpkitvk lfapdprnng tevcivsele dlsasvdmqd vytkikckie
     1381 sfnidhyrns lgedswslgq yggvflsctd klnrrtllvr piskqdpfnn fsgffpstta
     1441 klldgshqqh gflsltytka vtknvrhkli srnerrtfhk lseghtdgsp hflheillsa
     1501 qafdvvlcfp llnaiasifq arlprsqkek rkspgqpmrt haltsrnlpl iyintgvirv
     1561 ffpkneedhh iaeanpsike dtlvlkigsv smapqadnpl sravlrkdiy qralnlgilr
     1621 dpgsevedrq yqidlqsini gtaywnqlkp ekengkggvl teternsqnp alewnmassi
     1681 rrhqerrail tpiltdftvr itaapaiift kidaaenlht eeilvcghsl evnmttsldf
     1741 flnvaqvqll qqlvqanmvg leasssttev skqeqkkmdv adggtvetss rysgaqdsgi
     1801 gsdsvkirii qieqhsgtsq hriarpsrqs sivknlnfip fdifvtasri slmtysctas
     1861 pksksvqdqk dgekmskssl nlpetvsgss hdtkkpsqpc issvtaddll nsnpplsagr
     1921 kpgllslesl hastrssarq algitivrqp grrgagdiel qpflylvlsq psvllschhr
     1981 kqkveisvfd aglkgvasdy kctdpgktlp ealdyckiwl qtvagevdak sgippplitv
     2041 qikdflngpa dinvdiskpl kanlsfarfd qinqflkkii ttnedvsrke aassagiipd
     2101 editlisrhp stkdflpaah tstvqkasmq enlwqalscf qkisihtvqm vvlmetiphp
     2161 skpcllvsfs nlsgslniks ghktagihgs slvldikdfl lktslkerak sligpfccsv
     2221 nveakwckhs gdpgpeqsvp kiyidlrggl lqvfwgqehl nclvllqell wqylskkgsv
     2281 etliaerthp kcfsaernpa skpehtsddl rtglfqyiqd aeaqklpnay evvfyneted
     2341 spgmmlwryp eprvltlvki npvpfntted pdistadlgd vlqvpcsley wdelqksfva
     2401 frefslsesk vcelqlpsis lvndqkelia sdlwrivlns sqnvaddqss esesgsqsvc
     2461 dqlvtptala actrvdscft pwfvpslsvl iqftclevhl chhldqlgta ppkflqpfls
     2521 dknmpseley mivsfdephv ylrqwndesv fqeiqfstqa dckllecrnv tmqsvvkpfk
     2581 iwgqiavsss tagrlfdcti mvdpifisfg qyalhslnta iqawqqnrcp eaeefvfshf
     2641 vicndtqetl rfgqvdtden illatlhshq yswrshkspq llhiciegwg nwrwsepfsv
     2701 dntgtfirti qykgrtasli ikvqqlsgvq kqilicgrqt fcsylsesie lkvvqhyisq
     2761 dgqavvkehi nclaakqklp syilennelt elsvkstgde dwsqdvclss khtehstviq
     2821 vpssnssity vwctvltlep nshvqqrliv fsplfivrsh lpdpiilhie krslglnetq
     2881 vipgkgqeka lqniepdlth hltfqareed dpsecavpis ttlikqiatk sspggsvsqv
     2941 lsefygiasp pqpawpynrk dsdsneqlsq wdspmrvkls lwkpyvrtll iellpwalli
     3001 nqskwdlwlf egekivlqvp sgkviippnf eeafqvgiyw antntvhksv aiklvhnvts
     3061 pkwkdadnge vvtldeegfv eaeiklgafp ghqklcefci ssmvrqgiqi lqiedkttii
     3121 ndtsyqiyyr pqlviskshs eeedfqcpdg avfslgpaga gcseapsavp cwdllwepga
     3181 saagpslgdr rlvlgfssag srslwslpaa vsaelarqsv avptgaraes gfctraialt
     3241 yqehlgvtyl tltedpspri iihnrcsipl lvkenfkdtp kfevycrkip aecsvhhely
     3301 hqissypdck trdllpsill kvvssdelvn ewsdvvdinn qgtqivfltg fgcvyvdith
     3361 hcgtivitla pegragpagi nlnrsqeqtl slkmfisqls laafdditnh kvssellrlt
     3421 adnvflhmap gtsslsqefq qdsveglpqf hslqvycedl qldnqlysks nfhfavllcq
     3481 eektetaqws rmnnlivcnk dlesykencf iklciafsee enfmfhvndl sfelkparly
     3541 vedtfvyyik tlfdtylpen ktacksmnas dttlivpeqv reharalvkp vklrrlkiqp
     3601 vnllvsihas lklyiasdht plsfsvferg pifttarqlv halamhyaag alfragwvvg
     3661 sleilgspas lvrsigngia dffrlpyegl trgpgafvsg vsrgttsfvk hiskgtltsi
     3721 tnlatslarn mdrlsldeeh ynrqeewrrq lpeslgeglr qglsrlgisl lgaiagivdq
     3781 pmrnfqrvse aqasaghkar gvisgvgkgi mgvftkpigg aaelvsqtgy gilhgaglsq
     3841 lpkqrsrpnd qhveqapnsh vkyvwkmlqs lgrpevhmal dvmivsgsgq qhegclllts
     3901 evlfvvsise dtqqqafpvt eidcleddqq kdllkvqlkq qrvpsdleae garerlseqq
     3961 ynrlveyitk tschlapsta aapapqavaa eqpltitkty qyvvdpnfaq vfiskftmvk
     4021 nkalrkgfn
//
LOCUS       XP_041326540            4028 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326540
VERSION     XP_041326540.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470606.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4028
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X2"
                     /calculated_mol_wt=447948
     Region          2..>94
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          <2639..>2726
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3456..3864
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3617..3738
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..4028
                     /gene="VPS13B"
                     /coded_by="XM_041470606.1:199..12285"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mlesyvtpil msyvnryikn lkpsdlqlsl wggdvvlskl elkldvleqe lklpftflsg
       61 hihelrihvp wtklgsepvv itintmecil klkdgaqedh escgssstnr stteslksav
      121 ksrrvqqsas pdpdlppgyv qslirrvvnn vnivinnlil kyveddivls vnitsaecyt
      181 vdefwdrafm disatdlvlr kminfsdctv cldkrnasgk iefyqeplly kcsfrtrlhf
      241 tydnlnskmp siikihtlve slklsisdqq lpmfirimql gialyygeig sfkdgesedl
      301 ichtkdmlgn itgtedeass vmqyptqyis qdpyfhqddd qqqgwvswaw sfvpaivsyd
      361 deengsggig dgtaeqqksq slkdpvisvg fyctkatvtf kltemqaess yyspqkvksk
      421 evicweqegt tvevlmkgel ffdcqigfvg cqamclkgim gikdfeenmn rsdeeacffs
      481 cgenlsvkgm tyltnslfdy rspennsira efildaahhk etyteiagmq rfgafymdyl
      541 ytmestggkv sgnqqdlssv ksedfgnvqe mstkslivgp lnlrldssav hrimkmivca
      601 leheyepysr tkpditdgsr tmpsseevas leeyiptrlt tftvlkctii ipaaefnlld
      661 hllpiimgek nlsgllnaas fqplrplpsi rilvdkvnle hsvpmyaeql vhvvsslsqp
      721 sdnllhycys hcylkifgfq aaltsldskg lycipvpvip sfstavygkl ikfpkywskr
      781 ahvpltecif elpnltiqat raqtlllqti yqswchpvgn vssvvvneal lnevfqtsgv
      841 ksknplptle gsiqnvelky cgtslvkcas gtvgsikica kapgdggkek lipliqgpsd
      901 trdlhsskwl nesrkpesll apdlvaftiq ipqymdychn sgavllssvq glainvdpvl
      961 ytwliyqpqk rvsrhiqqqs vgavplgvsv trkkedeasv gsaplarqqs nqaseyassp
     1021 vktktvtesr plslpvktvl nssencrspe ermkefiaiv wnavkcltlq levqsccvfl
     1081 pndslpspst ivsgdipgtv rnwyhgqasm pgtlvvclpq ikimsaghkh meplqeipfv
     1141 vlrpileegd afpwtislhh fsvytllgqq mtlnlvepmg ctstlavtsq kllasgpesr
     1201 hsfvvclhvd lesleikcsn pqvqllyela eitskvwnki qrkgvlyqsv ssvctetitg
     1261 pvppsspvks svgtippdts tyspsadigt ttegdslqgg ddspfsdsit leqttsnigv
     1321 ssgrvslwmq wmlpkitvkl fapdprnngt evcivseled lsasvdmqdv ytkikckies
     1381 fnidhyrnsl gedswslgqy ggvflsctdk lnrrtllvrp iskqdpfnnf sgffpsttak
     1441 lldgshqqhg flsltytkav tknvrhklis rnerrtfhkl seghtdgsph flheillsaq
     1501 afdvvlcfpl lnaiasifqa rlprsqkekr kspgqpmrth altsrnlpli yintgvirvf
     1561 fpkneedhhi aeanpsiked tlvlkigsvs mapqadnpls ravlrkdiyq ralnlgilrd
     1621 pgsevedrqy qidlqsinig taywnqlkpe kengkggvlt eternsqnpa lewnmassir
     1681 rhqerrailt piltdftvri taapaiiftk idaaenlhte eilvcghsle vnmttsldff
     1741 lnvaqvqllq qlvqanmvgl easssttevs kqeqkkmdva dggtvetssr ysgaqdsgig
     1801 sdsvkiriiq ieqhsgtsqh riarpsrqss ivknlnfipf difvtasris lmtysctasp
     1861 ksksvqdqkd gekmskssln lpetvsgssh dtkkpsqpci ssvtaddlln snpplsagrk
     1921 pgllsleslh astrssarqa lgitivrqpg rrgagdielq pflylvlsqp svllschhrk
     1981 qkveisvfda glkgvasdyk ctdpgktlpe aldyckiwlq tvagevdaks gippplitvq
     2041 ikdflngpad invdiskplk anlsfarfdq inqflkkiit tnedvsrkea assagiipde
     2101 ditlisrhps tkdflpaaht stvqkasmqe nlwqalscfq kisihtvqmv vlmetiphps
     2161 kpcllvsfsn lsgslniksg hktagihgss lvldikdfll ktslkeraks ligpfccsvn
     2221 veakwckhsg dpgpeqsvpk iyidlrggll qvfwgqehln clvllqellw qylskkgsve
     2281 tliaerthpk cfsaernpas kpehtsddlr tglfqyiqda eaqklpnaye vvfyneteds
     2341 pgmmlwrype prvltlvkin pvpfnttedp distadlgdv lqvpcsleyw delqksfvaf
     2401 refslseskv celqlpsisl vndqkelias dlwrivlnss qnvaddqsse sesgsqsvcd
     2461 qlvtptalaa ctrvdscftp wfvpslsvli qftclevhlc hhldqlgtap pkflqpflsd
     2521 knmpseleym ivsfdephvy lrqwndesvf qeiqfstqad ckllecrnvt mqsvvkpfki
     2581 wgqiavssst agrlfdctim vdpifisfgq yalhslntai qawqqnrcpe aeefvfshfv
     2641 icndtqetlr fgqvdtdeni llatlhshqy swrshkspql lhiciegwgn wrwsepfsvd
     2701 ntgtfirtiq ykgrtaslii kvqqlsgvqk qilicgrqtf csylsesiel kvvqhyisqd
     2761 gqavvkehin claakqklps yilennelte lsvkstgded wsqdvclssk htehstviqv
     2821 pssnssityv wctvltlepn shvqqrlivf splfivrshl pdpiilhiek rslglnetqv
     2881 ipgkgqekal qniepdlthh ltfqareedd psecavpist tlikqiatks spggsvsqvl
     2941 sefygiaspp qpawpynrkd sdsneqlsqw dspmrvklsl wkpyvrtlli ellpwallin
     3001 qskwdlwlfe gekivlqvps gkviippnfe eafqvgiywa ntntvhksva iklvhnvtsp
     3061 kwkdadngev vtldeegfve aeiklgafpg hqklcefcis smvrqgiqil qiedkttiin
     3121 dtsyqiyyrp qlviskshse eedfqcpdga vfslgpagag cseapsavpc wdllwepgas
     3181 aagpslgdrr lvlgfssags rslwslpaav saelarqsva vptgaraesg fctraialty
     3241 qehlgvtylt ltedpsprii ihnrcsipll vkenfkdtpk fevycrkipa ecsvhhelyh
     3301 qissypdckt rdllpsillk vvssdelvne wsdvvdinnq gtqivfltgf gcvyvdithh
     3361 cgtivitlap egragpagin lnrsqeqtls lkmfisqlsl aafdditnhk vssellrlta
     3421 dnvflhmapg tsslsqefqq dsveglpqfh slqvycedlq ldnqlysksn fhfavllcqe
     3481 ektetaqwsr mnnlivcnkd lesykencfi klciafseee nfmfhvndls felkparlyv
     3541 edtfvyyikt lfdtylpenk tacksmnasd ttlivpeqvr eharalvkpv klrrlkiqpv
     3601 nllvsihasl klyiasdhtp lsfsvfergp ifttarqlvh alamhyaaga lfragwvvgs
     3661 leilgspasl vrsigngiad ffrlpyeglt rgpgafvsgv srgttsfvkh iskgtltsit
     3721 nlatslarnm drlsldeehy nrqeewrrql peslgeglrq glsrlgisll gaiagivdqp
     3781 mrnfqrvsea qasaghkarg visgvgkgim gvftkpigga aelvsqtgyg ilhgaglsql
     3841 pkqrsrpndq hveqapnshv kyvwkmlqsl grpevhmald vmivsgsgqq hegcllltse
     3901 vlfvvsised tqqqafpvte idcleddqqk dllkvqlkqq rvpsdleaeg arerlseqqy
     3961 nrlveyitkt schlapstaa apapqavaae qpltitktyq yvvdpnfaqv fiskftmvkn
     4021 kalrkgfn
//
LOCUS       XP_041326541            4028 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326541
VERSION     XP_041326541.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470607.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..4028
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X3"
                     /calculated_mol_wt=447948
     Region          2..103
                     /region_name="Chorein_N"
                     /note="N-terminal region of Chorein or VPS13; pfam12624"
                     /db_xref="CDD:463646"
     Region          <2639..>2726
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3456..3864
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3617..3738
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..4028
                     /gene="VPS13B"
                     /coded_by="XM_041470607.1:199..12285"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mlesyvtpil msyvnryikn lkpsdlqlsl wggdvvlskl elkldvleqe lklpftflsg
       61 hihelrihvp wtklgsepvv itintmecil klkdgaqqed hescgssstn rstteslksa
      121 vksrrvqqsa spdpdlppgy vqslirrvvn nvnivinnli lkyveddivl svnitsaecy
      181 tvdefwdraf mdisatdlvl rkminfsdct vcldkrnasg kiefyqepll ykcsfrtrlh
      241 ftydnlnskm psiikihtlv eslklsisdq qlpmfirimq lgialyygei gsfkdgesed
      301 lichtkdmlg nitgtedeas svmqyptqyi sqdpyfhqdd dqqqgwvswa wsfvpaivsy
      361 ddeengsggi gdgtaeqqks qslkdpvisv gfyctkatvt fkltemqaes syyspqkvks
      421 kevicweqeg ttvevlmkge lffdcqigfv gcqamclkgi mgikdfeenm nrsdeeacff
      481 scgenlsvkg mtyltnslfd yrspennsir aefildaahh ketyteiagm qrfgafymdy
      541 lytmestggk vsgnqqdlss vksedfgnvq emstkslivg plnlrldssa vhrimkmivc
      601 aleheyepys rtkpditdgs rtmpsseeva sleeyiptrl ttftvlkcti iipaaefnll
      661 dhllpiimge knlsgllnaa sfqplrplps irilvdkvnl ehsvpmyaeq lvhvvsslsq
      721 psdnllhycy shcylkifgf qaaltsldsk glycipvpvi psfstavygk likfpkywsk
      781 rahvplteci felpnltiqa traqtlllqt iyqswchpvg nvssvvvnea llnevfqtsg
      841 vksknplptl egsiqnvelk ycgtslvkca sgtvgsikic akapgdggke klipliqgps
      901 dtrdlhsskw lnesrkpesl lapdlvafti qipqymdych nsgavllssv qglainvdpv
      961 lytwliyqpq krvsrhiqqs vgavplgvsv trkkedeasv gsaplarqqs nqaseyassp
     1021 vktktvtesr plslpvktvl nssencrspe ermkefiaiv wnavkcltlq levqsccvfl
     1081 pndslpspst ivsgdipgtv rnwyhgqasm pgtlvvclpq ikimsaghkh meplqeipfv
     1141 vlrpileegd afpwtislhh fsvytllgqq mtlnlvepmg ctstlavtsq kllasgpesr
     1201 hsfvvclhvd lesleikcsn pqvqllyela eitskvwnki qrkgvlyqsv ssvctetitg
     1261 pvppsspvks svgtippdts tyspsadigt ttegdslqgg ddspfsdsit leqttsnigv
     1321 ssgrvslwmq wmlpkitvkl fapdprnngt evcivseled lsasvdmqdv ytkikckies
     1381 fnidhyrnsl gedswslgqy ggvflsctdk lnrrtllvrp iskqdpfnnf sgffpsttak
     1441 lldgshqqhg flsltytkav tknvrhklis rnerrtfhkl seghtdgsph flheillsaq
     1501 afdvvlcfpl lnaiasifqa rlprsqkekr kspgqpmrth altsrnlpli yintgvirvf
     1561 fpkneedhhi aeanpsiked tlvlkigsvs mapqadnpls ravlrkdiyq ralnlgilrd
     1621 pgsevedrqy qidlqsinig taywnqlkpe kengkggvlt eternsqnpa lewnmassir
     1681 rhqerrailt piltdftvri taapaiiftk idaaenlhte eilvcghsle vnmttsldff
     1741 lnvaqvqllq qlvqanmvgl easssttevs kqeqkkmdva dggtvetssr ysgaqdsgig
     1801 sdsvkiriiq ieqhsgtsqh riarpsrqss ivknlnfipf difvtasris lmtysctasp
     1861 ksksvqdqkd gekmskssln lpetvsgssh dtkkpsqpci ssvtaddlln snpplsagrk
     1921 pgllsleslh astrssarqa lgitivrqpg rrgagdielq pflylvlsqp svllschhrk
     1981 qkveisvfda glkgvasdyk ctdpgktlpe aldyckiwlq tvagevdaks gippplitvq
     2041 ikdflngpad invdiskplk anlsfarfdq inqflkkiit tnedvsrkea assagiipde
     2101 ditlisrhps tkdflpaaht stvqkasmqe nlwqalscfq kisihtvqmv vlmetiphps
     2161 kpcllvsfsn lsgslniksg hktagihgss lvldikdfll ktslkeraks ligpfccsvn
     2221 veakwckhsg dpgpeqsvpk iyidlrggll qvfwgqehln clvllqellw qylskkgsve
     2281 tliaerthpk cfsaernpas kpehtsddlr tglfqyiqda eaqklpnaye vvfyneteds
     2341 pgmmlwrype prvltlvkin pvpfnttedp distadlgdv lqvpcsleyw delqksfvaf
     2401 refslseskv celqlpsisl vndqkelias dlwrivlnss qnvaddqsse sesgsqsvcd
     2461 qlvtptalaa ctrvdscftp wfvpslsvli qftclevhlc hhldqlgtap pkflqpflsd
     2521 knmpseleym ivsfdephvy lrqwndesvf qeiqfstqad ckllecrnvt mqsvvkpfki
     2581 wgqiavssst agrlfdctim vdpifisfgq yalhslntai qawqqnrcpe aeefvfshfv
     2641 icndtqetlr fgqvdtdeni llatlhshqy swrshkspql lhiciegwgn wrwsepfsvd
     2701 ntgtfirtiq ykgrtaslii kvqqlsgvqk qilicgrqtf csylsesiel kvvqhyisqd
     2761 gqavvkehin claakqklps yilennelte lsvkstgded wsqdvclssk htehstviqv
     2821 pssnssityv wctvltlepn shvqqrlivf splfivrshl pdpiilhiek rslglnetqv
     2881 ipgkgqekal qniepdlthh ltfqareedd psecavpist tlikqiatks spggsvsqvl
     2941 sefygiaspp qpawpynrkd sdsneqlsqw dspmrvklsl wkpyvrtlli ellpwallin
     3001 qskwdlwlfe gekivlqvps gkviippnfe eafqvgiywa ntntvhksva iklvhnvtsp
     3061 kwkdadngev vtldeegfve aeiklgafpg hqklcefcis smvrqgiqil qiedkttiin
     3121 dtsyqiyyrp qlviskshse eedfqcpdga vfslgpagag cseapsavpc wdllwepgas
     3181 aagpslgdrr lvlgfssags rslwslpaav saelarqsva vptgaraesg fctraialty
     3241 qehlgvtylt ltedpsprii ihnrcsipll vkenfkdtpk fevycrkipa ecsvhhelyh
     3301 qissypdckt rdllpsillk vvssdelvne wsdvvdinnq gtqivfltgf gcvyvdithh
     3361 cgtivitlap egragpagin lnrsqeqtls lkmfisqlsl aafdditnhk vssellrlta
     3421 dnvflhmapg tsslsqefqq dsveglpqfh slqvycedlq ldnqlysksn fhfavllcqe
     3481 ektetaqwsr mnnlivcnkd lesykencfi klciafseee nfmfhvndls felkparlyv
     3541 edtfvyyikt lfdtylpenk tacksmnasd ttlivpeqvr eharalvkpv klrrlkiqpv
     3601 nllvsihasl klyiasdhtp lsfsvfergp ifttarqlvh alamhyaaga lfragwvvgs
     3661 leilgspasl vrsigngiad ffrlpyeglt rgpgafvsgv srgttsfvkh iskgtltsit
     3721 nlatslarnm drlsldeehy nrqeewrrql peslgeglrq glsrlgisll gaiagivdqp
     3781 mrnfqrvsea qasaghkarg visgvgkgim gvftkpigga aelvsqtgyg ilhgaglsql
     3841 pkqrsrpndq hveqapnshv kyvwkmlqsl grpevhmald vmivsgsgqq hegcllltse
     3901 vlfvvsised tqqqafpvte idcleddqqk dllkvqlkqq rvpsdleaeg arerlseqqy
     3961 nrlveyitkt schlapstaa apapqavaae qpltitktyq yvvdpnfaqv fiskftmvkn
     4021 kalrkgfn
//
LOCUS       XP_041326542            3974 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326542
VERSION     XP_041326542.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470608.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3974
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3974
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X4"
                     /calculated_mol_wt=441792
     Region          <2585..>2672
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <3402..3810
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3563..3684
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..3974
                     /gene="VPS13B"
                     /coded_by="XM_041470608.1:200..12124"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mdkigirasc hhyqyngmhl evkgwgsvaq nnlcirlfsq aqqedhescg ssstnrstte
       61 slksavksrr vqqsaspdpd lppgyvqsli rrvvnnvniv innlilkyve ddivlsvnit
      121 saecytvdef wdrafmdisa tdlvlrkmin fsdctvcldk rnasgkiefy qepllykcsf
      181 rtrlhftydn lnskmpsiik ihtlveslkl sisdqqlpmf irimqlgial yygeigsfkd
      241 gesedlicht kdmlgnitgt edeassvmqy ptqyisqdpy fhqdddqqqg wvswawsfvp
      301 aivsyddeen gsggigdgta eqqksqslkd pvisvgfyct katvtfklte mqaessyysp
      361 qkvkskevic weqegttvev lmkgelffdc qigfvgcqam clkgimgikd feenmnrsde
      421 eacffscgen lsvkgmtylt nslfdyrspe nnsiraefil daahhketyt eiagmqrfga
      481 fymdylytme stggkvsgnq qdlssvksed fgnvqemstk slivgplnlr ldssavhrim
      541 kmivcalehe yepysrtkpd itdgsrtmps seevasleey iptrlttftv lkctiiipaa
      601 efnlldhllp iimgeknlsg llnaasfqpl rplpsirilv dkvnlehsvp myaeqlvhvv
      661 sslsqpsdnl lhycyshcyl kifgfqaalt sldskglyci pvpvipsfst avygklikfp
      721 kywskrahvp ltecifelpn ltiqatraqt lllqtiyqsw chpvgnvssv vvneallnev
      781 fqtsgvkskn plptlegsiq nvelkycgts lvkcasgtvg sikicakapg dggkeklipl
      841 iqgpsdtrdl hsskwlnesr kpesllapdl vaftiqipqy mdychnsgav llssvqglai
      901 nvdpvlytwl iyqpqkrvsr hiqqqsvgav plgvsvtrkk edeasvgsap larqqsnqas
      961 eyasspvktk tvtesrplsl pvktvlnsse ncrspeermk efiaivwnav kcltlqlevq
     1021 sccvflpnds lpspstivsg dipgtvrnwy hgqasmpgtl vvclpqikim saghkhmepl
     1081 qeipfvvlrp ileegdafpw tislhhfsvy tllgqqmtln lvepmgctst lavtsqklla
     1141 sgpesrhsfv vclhvdlesl eikcsnpqvq llyelaeits kvwnkiqrkg vlyqsvssvc
     1201 tetitgpvpp sspvkssvgt ippdtstysp sadigttteg dslqggddsp fsdsitleqt
     1261 tsnigvssgr vslwmqwmlp kitvklfapd prnngtevci vseledlsas vdmqdvytki
     1321 kckiesfnid hyrnslgeds wslgqyggvf lsctdklnrr tllvrpiskq dpfnnfsgff
     1381 psttaklldg shqqhgflsl tytkavtknv rhklisrner rtfhklsegh tdgsphflhe
     1441 illsaqafdv vlcfpllnai asifqarlpr sqkekrkspg qpmrthalts rnlpliyint
     1501 gvirvffpkn eedhhiaean psikedtlvl kigsvsmapq adnplsravl rkdiyqraln
     1561 lgilrdpgse vedrqyqidl qsinigtayw nqlkpekeng kggvlteter nsqnpalewn
     1621 massirrhqe rrailtpilt dftvritaap aiiftkidaa enlhteeilv cghslevnmt
     1681 tsldfflnva qvqllqqlvq anmvgleass sttevskqeq kkmdvadggt vetssrysga
     1741 qdsgigsdsv kiriiqieqh sgtsqhriar psrqssivkn lnfipfdifv tasrislmty
     1801 sctaspksks vqdqkdgekm sksslnlpet vsgsshdtkk psqpcissvt addllnsnpp
     1861 lsagrkpgll sleslhastr ssarqalgit ivrqpgrrga gdielqpfly lvlsqpsvll
     1921 schhrkqkve isvfdaglkg vasdykctdp gktlpealdy ckiwlqtvag evdaksgipp
     1981 plitvqikdf lngpadinvd iskplkanls farfdqinqf lkkiittned vsrkeaassa
     2041 giipdeditl isrhpstkdf lpaahtstvq kasmqenlwq alscfqkisi htvqmvvlme
     2101 tiphpskpcl lvsfsnlsgs lniksghkta gihgsslvld ikdfllktsl keraksligp
     2161 fccsvnveak wckhsgdpgp eqsvpkiyid lrggllqvfw gqehlnclvl lqellwqyls
     2221 kkgsvetlia erthpkcfsa ernpaskpeh tsddlrtglf qyiqdaeaqk lpnayevvfy
     2281 netedspgmm lwrypeprvl tlvkinpvpf nttedpdist adlgdvlqvp csleywdelq
     2341 ksfvafrefs lseskvcelq lpsislvndq keliasdlwr ivlnssqnva ddqssesesg
     2401 sqsvcdqlvt ptalaactrv dscftpwfvp slsvliqftc levhlchhld qlgtappkfl
     2461 qpflsdknmp seleymivsf dephvylrqw ndesvfqeiq fstqadckll ecrnvtmqsv
     2521 vkpfkiwgqi avssstagrl fdctimvdpi fisfgqyalh slntaiqawq qnrcpeaeef
     2581 vfshfvicnd tqetlrfgqv dtdenillat lhshqyswrs hkspqllhic iegwgnwrws
     2641 epfsvdntgt firtiqykgr tasliikvqq lsgvqkqili cgrqtfcsyl sesielkvvq
     2701 hyisqdgqav vkehinclaa kqklpsyile nneltelsvk stgdedwsqd vclsskhteh
     2761 stviqvpssn ssityvwctv ltlepnshvq qrlivfsplf ivrshlpdpi ilhiekrslg
     2821 lnetqvipgk gqekalqnie pdlthhltfq areeddpsec avpisttlik qiatksspgg
     2881 svsqvlsefy giasppqpaw pynrkdsdsn eqlsqwdspm rvklslwkpy vrtlliellp
     2941 wallinqskw dlwlfegeki vlqvpsgkvi ippnfeeafq vgiywantnt vhksvaiklv
     3001 hnvtspkwkd adngevvtld eegfveaeik lgafpghqkl cefcissmvr qgiqilqied
     3061 kttiindtsy qiyyrpqlvi skshseeedf qcpdgavfsl gpagagcsea psavpcwdll
     3121 wepgasaagp slgdrrlvlg fssagsrslw slpaavsael arqsvavptg araesgfctr
     3181 aialtyqehl gvtyltlted pspriiihnr csipllvken fkdtpkfevy crkipaecsv
     3241 hhelyhqiss ypdcktrdll psillkvvss delvnewsdv vdinnqgtqi vfltgfgcvy
     3301 vdithhcgti vitlapegra gpaginlnrs qeqtlslkmf isqlslaafd ditnhkvsse
     3361 llrltadnvf lhmapgtssl sqefqqdsve glpqfhslqv ycedlqldnq lysksnfhfa
     3421 vllcqeekte taqwsrmnnl ivcnkdlesy kencfiklci afseeenfmf hvndlsfelk
     3481 parlyvedtf vyyiktlfdt ylpenktack smnasdttli vpeqvrehar alvkpvklrr
     3541 lkiqpvnllv sihaslklyi asdhtplsfs vfergpiftt arqlvhalam hyaagalfra
     3601 gwvvgsleil gspaslvrsi gngiadffrl pyegltrgpg afvsgvsrgt tsfvkhiskg
     3661 tltsitnlat slarnmdrls ldeehynrqe ewrrqlpesl geglrqglsr lgisllgaia
     3721 givdqpmrnf qrvseaqasa ghkargvisg vgkgimgvft kpiggaaelv sqtgygilhg
     3781 aglsqlpkqr srpndqhveq apnshvkyvw kmlqslgrpe vhmaldvmiv sgsgqqhegc
     3841 llltsevlfv vsisedtqqq afpvteidcl eddqqkdllk vqlkqqrvps dleaegarer
     3901 lseqqynrlv eyitktschl apstaaapap qavaaeqplt itktyqyvvd pnfaqvfisk
     3961 ftmvknkalr kgfn
//
LOCUS       XP_041326543            3527 aa            linear   VRT 06-MAY-2021
DEFINITION  vacuolar protein sorting-associated protein 13B isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326543
VERSION     XP_041326543.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470609.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3527
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3527
                     /product="vacuolar protein sorting-associated protein 13B
                     isoform X5"
                     /calculated_mol_wt=391392
     Region          <2138..>2225
                     /region_name="SHR-BD"
                     /note="SHR-binding domain of vacuolar-sorting associated
                     protein 13; pfam06650"
                     /db_xref="CDD:461974"
     Region          <2955..3363
                     /region_name="MRS6"
                     /note="Vacuolar protein sorting-associated protein
                     [Intracellular trafficking and secretion]; COG5043"
                     /db_xref="CDD:227376"
     Region          <3116..3237
                     /region_name="VPS13_C"
                     /note="Vacuolar-sorting-associated 13 protein C-terminal;
                     pfam16909"
                     /db_xref="CDD:465310"
     CDS             1..3527
                     /gene="VPS13B"
                     /coded_by="XM_041470609.1:245..10828"
                     /db_xref="GeneID:121355310"
ORIGIN      
        1 mqliircvhg wrsvlyivqe tyteiagmqr fgafymdyly tmestggkvs gnqqdlssvk
       61 sedfgnvqem stkslivgpl nlrldssavh rimkmivcal eheyepysrt kpditdgsrt
      121 mpsseevasl eeyiptrltt ftvlkctiii paaefnlldh llpiimgekn lsgllnaasf
      181 qplrplpsir ilvdkvnleh svpmyaeqlv hvvsslsqps dnllhycysh cylkifgfqa
      241 altsldskgl ycipvpvips fstavygkli kfpkywskra hvpltecife lpnltiqatr
      301 aqtlllqtiy qswchpvgnv ssvvvneall nevfqtsgvk sknplptleg siqnvelkyc
      361 gtslvkcasg tvgsikicak apgdggkekl ipliqgpsdt rdlhsskwln esrkpeslla
      421 pdlvaftiqi pqymdychns gavllssvqg lainvdpvly twliyqpqkr vsrhiqqqsv
      481 gavplgvsvt rkkedeasvg saplarqqsn qaseyasspv ktktvtesrp lslpvktvln
      541 ssencrspee rmkefiaivw navkcltlql evqsccvflp ndslpspsti vsgdipgtvr
      601 nwyhgqasmp gtlvvclpqi kimsaghkhm eplqeipfvv lrpileegda fpwtislhhf
      661 svytllgqqm tlnlvepmgc tstlavtsqk llasgpesrh sfvvclhvdl esleikcsnp
      721 qvqllyelae itskvwnkiq rkgvlyqsvs svctetitgp vppsspvkss vgtippdtst
      781 yspsadigtt tegdslqggd dspfsdsitl eqttsnigvs sgrvslwmqw mlpkitvklf
      841 apdprnngte vcivseledl sasvdmqdvy tkikckiesf nidhyrnslg edswslgqyg
      901 gvflsctdkl nrrtllvrpi skqdpfnnfs gffpsttakl ldgshqqhgf lsltytkavt
      961 knvrhklisr nerrtfhkls eghtdgsphf lheillsaqa fdvvlcfpll naiasifqar
     1021 lprsqkekrk spgqpmrtha ltsrnlpliy intgvirvff pkneedhhia eanpsikedt
     1081 lvlkigsvsm apqadnplsr avlrkdiyqr alnlgilrdp gsevedrqyq idlqsinigt
     1141 aywnqlkpek engkggvlte ternsqnpal ewnmassirr hqerrailtp iltdftvrit
     1201 aapaiiftki daaenlhtee ilvcghslev nmttsldffl nvaqvqllqq lvqanmvgle
     1261 asssttevsk qeqkkmdvad ggtvetssry sgaqdsgigs dsvkiriiqi eqhsgtsqhr
     1321 iarpsrqssi vknlnfipfd ifvtasrisl mtysctaspk sksvqdqkdg ekmsksslnl
     1381 petvsgsshd tkkpsqpcis svtaddllns npplsagrkp gllsleslha strssarqal
     1441 gitivrqpgr rgagdielqp flylvlsqps vllschhrkq kveisvfdag lkgvasdykc
     1501 tdpgktlpea ldyckiwlqt vagevdaksg ippplitvqi kdflngpadi nvdiskplka
     1561 nlsfarfdqi nqflkkiitt nedvsrkeaa ssagiipded itlisrhpst kdflpaahts
     1621 tvqkasmqen lwqalscfqk isihtvqmvv lmetiphpsk pcllvsfsnl sgslniksgh
     1681 ktagihgssl vldikdfllk tslkeraksl igpfccsvnv eakwckhsgd pgpeqsvpki
     1741 yidlrggllq vfwgqehlnc lvllqellwq ylskkgsvet liaerthpkc fsaernpask
     1801 pehtsddlrt glfqyiqdae aqklpnayev vfynetedsp gmmlwrypep rvltlvkinp
     1861 vpfnttedpd istadlgdvl qvpcsleywd elqksfvafr efslseskvc elqlpsislv
     1921 ndqkeliasd lwrivlnssq nvaddqsses esgsqsvcdq lvtptalaac trvdscftpw
     1981 fvpslsvliq ftclevhlch hldqlgtapp kflqpflsdk nmpseleymi vsfdephvyl
     2041 rqwndesvfq eiqfstqadc kllecrnvtm qsvvkpfkiw gqiavsssta grlfdctimv
     2101 dpifisfgqy alhslntaiq awqqnrcpea eefvfshfvi cndtqetlrf gqvdtdenil
     2161 latlhshqys wrshkspqll hiciegwgnw rwsepfsvdn tgtfirtiqy kgrtasliik
     2221 vqqlsgvqkq ilicgrqtfc sylsesielk vvqhyisqdg qavvkehinc laakqklpsy
     2281 ilenneltel svkstgdedw sqdvclsskh tehstviqvp ssnssityvw ctvltlepns
     2341 hvqqrlivfs plfivrshlp dpiilhiekr slglnetqvi pgkgqekalq niepdlthhl
     2401 tfqareeddp secavpistt likqiatkss pggsvsqvls efygiasppq pawpynrkds
     2461 dsneqlsqwd spmrvklslw kpyvrtllie llpwallinq skwdlwlfeg ekivlqvpsg
     2521 kviippnfee afqvgiywan tntvhksvai klvhnvtspk wkdadngevv tldeegfvea
     2581 eiklgafpgh qklcefciss mvrqgiqilq iedkttiind tsyqiyyrpq lviskshsee
     2641 edfqcpdgav fslgpagagc seapsavpcw dllwepgasa agpslgdrrl vlgfssagsr
     2701 slwslpaavs aelarqsvav ptgaraesgf ctraialtyq ehlgvtyltl tedpspriii
     2761 hnrcsipllv kenfkdtpkf evycrkipae csvhhelyhq issypdcktr dllpsillkv
     2821 vssdelvnew sdvvdinnqg tqivfltgfg cvyvdithhc gtivitlape gragpaginl
     2881 nrsqeqtlsl kmfisqlsla afdditnhkv ssellrltad nvflhmapgt sslsqefqqd
     2941 sveglpqfhs lqvycedlql dnqlysksnf hfavllcqee ktetaqwsrm nnlivcnkdl
     3001 esykencfik lciafseeen fmfhvndlsf elkparlyve dtfvyyiktl fdtylpenkt
     3061 acksmnasdt tlivpeqvre haralvkpvk lrrlkiqpvn llvsihaslk lyiasdhtpl
     3121 sfsvfergpi fttarqlvha lamhyaagal fragwvvgsl eilgspaslv rsigngiadf
     3181 frlpyegltr gpgafvsgvs rgttsfvkhi skgtltsitn latslarnmd rlsldeehyn
     3241 rqeewrrqlp eslgeglrqg lsrlgisllg aiagivdqpm rnfqrvseaq asaghkargv
     3301 isgvgkgimg vftkpiggaa elvsqtgygi lhgaglsqlp kqrsrpndqh veqapnshvk
     3361 yvwkmlqslg rpevhmaldv mivsgsgqqh egcllltsev lfvvsisedt qqqafpvtei
     3421 dcleddqqkd llkvqlkqqr vpsdleaega rerlseqqyn rlveyitkts chlapstaaa
     3481 papqavaaeq pltitktyqy vvdpnfaqvf iskftmvknk alrkgfn
//
LOCUS       XP_041326544             724 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326544
VERSION     XP_041326544.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470610.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..724
                     /product="phosphatidylinositol 3-kinase regulatory subunit
                     alpha isoform X1"
                     /calculated_mol_wt=83603
     Region          5..79
                     /region_name="SH3_PI3K_p85alpha"
                     /note="Src Homology 3 domain of the p85alpha regulatory
                     subunit of Class IA Phosphatidylinositol 3-kinases;
                     cd11910"
                     /db_xref="CDD:212843"
     Site            order(12..14,18,21,53..55,70,72..73)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212843"
     Region          114..302
                     /region_name="RhoGAP_p85"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in the p85 isoforms of the
                     regulatory subunit of the class IA PI3K
                     (phosphatidylinositol 3'-kinase). This domain is also
                     called Bcr (breakpoint cluster region protein)...;
                     cd04388"
                     /db_xref="CDD:239853"
     Site            order(151,187,191,263,266..267,287)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239853"
     Site            151
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239853"
     Region          328..435
                     /region_name="SH2_nSH2_p85_like"
                     /note="N-terminal Src homology 2 (nSH2) domain found in
                     p85; cd09942"
                     /db_xref="CDD:198195"
     Site            order(340,358,380,382)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198195"
     Site            order(381,408)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198195"
     Region          440..600
                     /region_name="iSH2_PIK3R1"
                     /note="Inter-Src homology 2 (iSH2) helical domain of Class
                     IA Phosphoinositide 3-kinase Regulatory subunit 1, PIK3R1,
                     also called p85alpha; cd12924"
                     /db_xref="CDD:214017"
     Site            order(463,467,470,481..483,485..487,489..490,493..494,
                     496..497,500..501,504,508,523..524,527,534,560..561,564,
                     567)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:214017"
     Region          617..720
                     /region_name="SH2_cSH2_p85_like"
                     /note="C-terminal Src homology 2 (cSH2) domain found in
                     p85; cd09930"
                     /db_xref="CDD:198184"
     Site            order(631,649,651..652,669,671)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198184"
     Site            order(670,681,703,706,710)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198184"
     CDS             1..724
                     /gene="PIK3R1"
                     /coded_by="XM_041470610.1:617..2791"
                     /db_xref="GeneID:121355311"
ORIGIN      
        1 msaegyqyra lydykkeree didlhlgdil tvnkgtllal gfsegeeakp eeigwlngfn
       61 ettgergdfp gtyveyigrk kispptpkpr pprplpvapc pakaeseseq qafslpdlte
      121 qftppevapp ilvkivetie kkgleysaly gaqgssstve lrqifecdas sldletfdvh
      181 tlsdalkryi ldlpnpiipa avysdmisvs qevqsseeya qllkklirsp nippqywltl
      241 qyllkhflrv cqassknlln arslaeifsp llfkfqiass dttehhikil evlitsewne
      301 rqpvpalppk ppkpntvtnn smnnnmslqd aewywgdisr eevneklrdt adgtflvrda
      361 stkmhgdytl tlrkggnnkl ikifhrdgky gfsdpltfss vvelinhyrn eslaqynpkl
      421 dvkllypvsk yqqdqvvked sieavgkklh eyntqfqeks reydrlyedy trtsqeiqmk
      481 rtaieafnet ikifeeqcqt qeryskeyie kfkregneke iqrimhnyek lksriseivd
      541 srrrleedlk kqaaeyreid krmnsikpdl iqlrktrdqy lmwltqkgvr qkklnewlgn
      601 enaedqysmv eddedlphhd ertwnvgnin rsqaenllrg krdgtflvre sskqgcyacs
      661 vvvdgevkhc vinktptgyg faepynlyns lkelvlhyqh tslvqhndsl nvtlaypvya
      721 qqrr
//
LOCUS       XP_041326545             724 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326545
VERSION     XP_041326545.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470611.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..724
                     /product="phosphatidylinositol 3-kinase regulatory subunit
                     alpha isoform X1"
                     /calculated_mol_wt=83603
     Region          5..79
                     /region_name="SH3_PI3K_p85alpha"
                     /note="Src Homology 3 domain of the p85alpha regulatory
                     subunit of Class IA Phosphatidylinositol 3-kinases;
                     cd11910"
                     /db_xref="CDD:212843"
     Site            order(12..14,18,21,53..55,70,72..73)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212843"
     Region          114..302
                     /region_name="RhoGAP_p85"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain present in the p85 isoforms of the
                     regulatory subunit of the class IA PI3K
                     (phosphatidylinositol 3'-kinase). This domain is also
                     called Bcr (breakpoint cluster region protein)...;
                     cd04388"
                     /db_xref="CDD:239853"
     Site            order(151,187,191,263,266..267,287)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239853"
     Site            151
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239853"
     Region          328..435
                     /region_name="SH2_nSH2_p85_like"
                     /note="N-terminal Src homology 2 (nSH2) domain found in
                     p85; cd09942"
                     /db_xref="CDD:198195"
     Site            order(340,358,380,382)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198195"
     Site            order(381,408)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198195"
     Region          440..600
                     /region_name="iSH2_PIK3R1"
                     /note="Inter-Src homology 2 (iSH2) helical domain of Class
                     IA Phosphoinositide 3-kinase Regulatory subunit 1, PIK3R1,
                     also called p85alpha; cd12924"
                     /db_xref="CDD:214017"
     Site            order(463,467,470,481..483,485..487,489..490,493..494,
                     496..497,500..501,504,508,523..524,527,534,560..561,564,
                     567)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:214017"
     Region          617..720
                     /region_name="SH2_cSH2_p85_like"
                     /note="C-terminal Src homology 2 (cSH2) domain found in
                     p85; cd09930"
                     /db_xref="CDD:198184"
     Site            order(631,649,651..652,669,671)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198184"
     Site            order(670,681,703,706,710)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198184"
     CDS             1..724
                     /gene="PIK3R1"
                     /coded_by="XM_041470611.1:696..2870"
                     /db_xref="GeneID:121355311"
ORIGIN      
        1 msaegyqyra lydykkeree didlhlgdil tvnkgtllal gfsegeeakp eeigwlngfn
       61 ettgergdfp gtyveyigrk kispptpkpr pprplpvapc pakaeseseq qafslpdlte
      121 qftppevapp ilvkivetie kkgleysaly gaqgssstve lrqifecdas sldletfdvh
      181 tlsdalkryi ldlpnpiipa avysdmisvs qevqsseeya qllkklirsp nippqywltl
      241 qyllkhflrv cqassknlln arslaeifsp llfkfqiass dttehhikil evlitsewne
      301 rqpvpalppk ppkpntvtnn smnnnmslqd aewywgdisr eevneklrdt adgtflvrda
      361 stkmhgdytl tlrkggnnkl ikifhrdgky gfsdpltfss vvelinhyrn eslaqynpkl
      421 dvkllypvsk yqqdqvvked sieavgkklh eyntqfqeks reydrlyedy trtsqeiqmk
      481 rtaieafnet ikifeeqcqt qeryskeyie kfkregneke iqrimhnyek lksriseivd
      541 srrrleedlk kqaaeyreid krmnsikpdl iqlrktrdqy lmwltqkgvr qkklnewlgn
      601 enaedqysmv eddedlphhd ertwnvgnin rsqaenllrg krdgtflvre sskqgcyacs
      661 vvvdgevkhc vinktptgyg faepynlyns lkelvlhyqh tslvqhndsl nvtlaypvya
      721 qqrr
//
LOCUS       XP_041326546             424 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylinositol 3-kinase regulatory subunit alpha isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326546
VERSION     XP_041326546.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470612.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..424
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..424
                     /product="phosphatidylinositol 3-kinase regulatory subunit
                     alpha isoform X2"
                     /calculated_mol_wt=49961
     Region          28..135
                     /region_name="SH2_nSH2_p85_like"
                     /note="N-terminal Src homology 2 (nSH2) domain found in
                     p85; cd09942"
                     /db_xref="CDD:198195"
     Site            order(40,58,80,82)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198195"
     Site            order(81,108)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198195"
     Region          140..300
                     /region_name="iSH2_PIK3R1"
                     /note="Inter-Src homology 2 (iSH2) helical domain of Class
                     IA Phosphoinositide 3-kinase Regulatory subunit 1, PIK3R1,
                     also called p85alpha; cd12924"
                     /db_xref="CDD:214017"
     Site            order(163,167,170,181..183,185..187,189..190,193..194,
                     196..197,200..201,204,208,223..224,227,234,260..261,264,
                     267)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:214017"
     Region          317..420
                     /region_name="SH2_cSH2_p85_like"
                     /note="C-terminal Src homology 2 (cSH2) domain found in
                     p85; cd09930"
                     /db_xref="CDD:198184"
     Site            order(331,349,351..352,369,371)
                     /site_type="other"
                     /note="phosphotyrosine binding pocket [polypeptide
                     binding]"
                     /db_xref="CDD:198184"
     Site            order(370,381,403,406,410)
                     /site_type="other"
                     /note="hydrophobic binding pocket [polypeptide binding]"
                     /db_xref="CDD:198184"
     CDS             1..424
                     /gene="PIK3R1"
                     /coded_by="XM_041470612.1:275..1549"
                     /db_xref="GeneID:121355311"
ORIGIN      
        1 mhnlqtlppk ppkpntvtnn smnnnmslqd aewywgdisr eevneklrdt adgtflvrda
       61 stkmhgdytl tlrkggnnkl ikifhrdgky gfsdpltfss vvelinhyrn eslaqynpkl
      121 dvkllypvsk yqqdqvvked sieavgkklh eyntqfqeks reydrlyedy trtsqeiqmk
      181 rtaieafnet ikifeeqcqt qeryskeyie kfkregneke iqrimhnyek lksriseivd
      241 srrrleedlk kqaaeyreid krmnsikpdl iqlrktrdqy lmwltqkgvr qkklnewlgn
      301 enaedqysmv eddedlphhd ertwnvgnin rsqaenllrg krdgtflvre sskqgcyacs
      361 vvvdgevkhc vinktptgyg faepynlyns lkelvlhyqh tslvqhndsl nvtlaypvya
      421 qqrr
//
LOCUS       XP_041326547             908 aa            linear   VRT 06-MAY-2021
DEFINITION  junction-mediating and -regulatory protein isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326547
VERSION     XP_041326547.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470613.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..908
                     /product="junction-mediating and -regulatory protein
                     isoform X1"
                     /calculated_mol_wt=103467
     Region          7..55
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          <62..>168
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          166..518
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     Region          <349..>694
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..908
                     /gene="JMY"
                     /coded_by="XM_041470613.1:152..2878"
                     /db_xref="GeneID:121355313"
ORIGIN      
        1 msafaleetl eadwvavrph afqerekhkf afivawneie gkfaitchnr taqrqrsgsr
       61 elrrggpetg avpkaggpav rrdpgpprgc ahpraealpk splrpkgspa rrpqrgpeaa
      121 gaveeievle lgkedvaaal slppsppras elgapdaepa geecswaglf sfqdlravhq
      181 qlcsvnsele pylpafpeep sgmwtvlfga pelseqemda lcynlqvylv hsldtcgwki
      241 lsqvlftetd dpeeyyesls elrqkgyeev lqrarrriqe llekhkntes mvellelyqm
      301 edeaysnlae attelyqyll qpfrdmrela mlrrqqikis iendylgprr ieslqkedad
      361 wqkkahmavl siqdltvkyf eitaktqkav ydrmradqkk fgkaawaaav ermeklqyav
      421 sketlqlmra keicleqkkh alkeemqslk ggtealahld hleadyydlq lqlyevqfei
      481 lkceelllta qlesirrlms ekrdevvyyd tyesmeamle kedmatsvhl qkeelqklqq
      541 kirqlearrg risakkaylr nkkeiciakh nekiqqrrqs aeeykthhtv qmkrdqlqde
      601 eerksswvsq erqktldrlr tfkqrypgqv ilkstrlrla harrkcaass vpcveqpqsl
      661 patiqiqdks eevelekavq plqvqestsl kqlqdvslpp ngvtselphv stspltsdql
      721 qpetatgvql ppplpppppp pplpskedat ksleksdsfv krqsvekgvq hssgvppahl
      781 fdssqlvsak kklkktgdle glqrrrvssp mdevlaslkr gsfhlrkveq rslppfpded
      841 dsnnilaqir kgvklkkvqk dvlresftil pdtdpltrsi healrrikea spesedeees
      901 lpctdwen
//
LOCUS       XP_041326548             876 aa            linear   VRT 06-MAY-2021
DEFINITION  junction-mediating and -regulatory protein isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326548
VERSION     XP_041326548.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470614.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..876
                     /product="junction-mediating and -regulatory protein
                     isoform X2"
                     /calculated_mol_wt=99436
     Region          7..55
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          <62..>168
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          166..518
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     CDS             1..876
                     /gene="JMY"
                     /coded_by="XM_041470614.1:152..2782"
                     /db_xref="GeneID:121355313"
ORIGIN      
        1 msafaleetl eadwvavrph afqerekhkf afivawneie gkfaitchnr taqrqrsgsr
       61 elrrggpetg avpkaggpav rrdpgpprgc ahpraealpk splrpkgspa rrpqrgpeaa
      121 gaveeievle lgkedvaaal slppsppras elgapdaepa geecswaglf sfqdlravhq
      181 qlcsvnsele pylpafpeep sgmwtvlfga pelseqemda lcynlqvylv hsldtcgwki
      241 lsqvlftetd dpeeyyesls elrqkgyeev lqrarrriqe llekhkntes mvellelyqm
      301 edeaysnlae attelyqyll qpfrdmrela mlrrqqikis iendylgprr ieslqkedad
      361 wqkkahmavl siqdltvkyf eitaktqkav ydrmradqkk fgkaawaaav ermeklqyav
      421 sketlqlmra keicleqkkh alkeemqslk ggtealahld hleadyydlq lqlyevqfei
      481 lkceelllta qlesirrlms ekrdevvyyd tyesmeamle kedmatsvhl qkeelqklqq
      541 kirqlearrg risakkaylr nkkeiciakh nekiqqrrqs aeeykthhtv qmrypgqvil
      601 kstrlrlaha rrkcaassvp cveqpqslpa tiqiqdksee velekavqpl qvqestslkq
      661 lqdvslppng vtselphvst spltsdqlqp etatgvqlpp plpppppppp lpskedatks
      721 leksdsfvkr qsvekgvqhs sgvppahlfd ssqlvsakkk lkktgdlegl qrrrvsspmd
      781 evlaslkrgs fhlrkveqrs lppfpdedds nnilaqirkg vklkkvqkdv lresftilpd
      841 tdpltrsihe alrrikeasp esedeeeslp ctdwen
//
LOCUS       XP_041326549             850 aa            linear   VRT 06-MAY-2021
DEFINITION  junction-mediating and -regulatory protein isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326549
VERSION     XP_041326549.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470615.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..850
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..850
                     /product="junction-mediating and -regulatory protein
                     isoform X3"
                     /calculated_mol_wt=96419
     Region          7..55
                     /region_name="WHAMM-JMY_N"
                     /note="N-terminal of Junction-mediating and WASP
                     homolog-associated; pfam15920"
                     /db_xref="CDD:464942"
     Region          <62..>168
                     /region_name="PRK07764"
                     /note="DNA polymerase III subunits gamma and tau;
                     Validated"
                     /db_xref="CDD:236090"
     Region          166..460
                     /region_name="JMY"
                     /note="Junction-mediating and -regulatory protein;
                     pfam15871"
                     /db_xref="CDD:464915"
     Region          <291..>636
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     CDS             1..850
                     /gene="JMY"
                     /coded_by="XM_041470615.1:152..2704"
                     /db_xref="GeneID:121355313"
ORIGIN      
        1 msafaleetl eadwvavrph afqerekhkf afivawneie gkfaitchnr taqrqrsgsr
       61 elrrggpetg avpkaggpav rrdpgpprgc ahpraealpk splrpkgspa rrpqrgpeaa
      121 gaveeievle lgkedvaaal slppsppras elgapdaepa geecswaglf sfqdlravhq
      181 qlcsvnsele pylpafpeep sgmwtvlfga pelseqemda lcynlqvylv hsldtcgwki
      241 lsqvlftetd dpeeyyesls elrqkgyeev lqrarrriqe isiendylgp rrieslqked
      301 adwqkkahma vlsiqdltvk yfeitaktqk avydrmradq kkfgkaawaa avermeklqy
      361 avsketlqlm rakeicleqk khalkeemqs lkggtealah ldhleadyyd lqlqlyevqf
      421 eilkceelll taqlesirrl msekrdevvy ydtyesmeam lekedmatsv hlqkeelqkl
      481 qqkirqlear rgrisakkay lrnkkeicia khnekiqqrr qsaeeykthh tvqmkrdqlq
      541 deeerksswv sqerqktldr lrtfkqrypg qvilkstrlr laharrkcaa ssvpcveqpq
      601 slpatiqiqd kseeveleka vqplqvqest slkqlqdvsl ppngvtselp hvstspltsd
      661 qlqpetatgv qlppplpppp pppplpsked atksleksds fvkrqsvekg vqhssgvppa
      721 hlfdssqlvs akkklkktgd leglqrrrvs spmdevlasl krgsfhlrkv eqrslppfpd
      781 eddsnnilaq irkgvklkkv qkdvlresft ilpdtdpltr sihealrrik easpesedee
      841 eslpctdwen
//
LOCUS       XP_041326551            1035 aa            linear   VRT 06-MAY-2021
DEFINITION  exosome RNA helicase MTR4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326551
VERSION     XP_041326551.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470617.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1035
                     /product="exosome RNA helicase MTR4"
                     /calculated_mol_wt=116865
     Region          126..1007
                     /region_name="Dob10"
                     /note="Superfamily II RNA helicase [Replication,
                     recombination and repair]; COG4581"
                     /db_xref="CDD:443638"
     CDS             1..1035
                     /gene="MTREX"
                     /coded_by="XM_041470617.1:275..3382"
                     /db_xref="GeneID:121355314"
ORIGIN      
        1 maeafgdelf svfeedaaaa asgakksktg paegarrpgk rleekpsvpa aivkpkreae
       61 idhtenvilg kkpkledals edvnltdlmp qvkvqsvetv egcthevalp aneeftglkp
      121 rtgkaakeyp fildafqrea ilcvdnnqsv lvsahtsagk tvcaeyaial alrekqrvif
      181 tspikalsnq kyremyeefq dvglmtgdvt inptasclvm tteilrsmly rgsevmreva
      241 wvifdeihym rdtergvvwe etiillpdnv hyvflsatip narqfaewic hlhkqpchvi
      301 ytdyrptplq hyifpaggdg lhlvvdengd frednfntam qvlrdagdla kgdqkgrkgg
      361 tkgpsnvfki vkmimernfq pviifsfskk dceayalqmt kldfntdeek kmveevfnna
      421 idclsdedkk lpqvehvlpl lkrgigihhg gllpilketi eilfseglik alfatetfam
      481 ginmpartvl ftsaskfdgk dfrwissgey iqmsgragrr gmddrgivil mvdekmspti
      541 gkqllkgsad plnsafhlty nmvlnllrve einpeymlek sfyqfqhyrt ipeivervnn
      601 leaqynkivi pneenvviyy rirqqlaklg kdieeyihkp kyclpflqpg rlvkvknegd
      661 dygwgvvvnf skksnvkpns geldplyvve vllhcskdsl knsatesakp arpdergemq
      721 vvpvlvhlvs aissvrlyip kdlrpidnrq svlksvqevq krfpdgvpll dpiddmgikd
      781 qglkkviqki eafehrmysh plhndpnles iyklcekkaq iamdikvakr elkkartvlq
      841 mdelkcrkrv lrrlgfatss dviemkgrva ceissadell ltemmfnglf ndlsaeqata
      901 llscfvfqen ssempklteq lagplrqmqe cakriakvsa eakletdeen ylnsfrpnlm
      961 dvvytwanga nfahickmtd vfegsiircm rrleellrqm cqaakaignt elenkfaegi
     1021 tkikrdivfa aslyl
//
LOCUS       XP_041326552             284 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326552
VERSION     XP_041326552.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470618.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..284
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..284
                     /product="phospholipid phosphatase 1 isoform X1"
                     /calculated_mol_wt=31667
     Region          99..237
                     /region_name="PAP2_wunen"
                     /note="PAP2, wunen subfamily. Most likely a family of
                     membrane associated phosphatidic acid phosphatases. Wunen
                     is a drosophila protein expressed in the central nervous
                     system, which provides repellent activity towards
                     primordial germ cells (PGCs), controls the...; cd03384"
                     /db_xref="CDD:239479"
     Site            order(121,128,170..172,218,224,228)
                     /site_type="active"
                     /db_xref="CDD:239479"
     CDS             1..284
                     /gene="PLPP1"
                     /coded_by="XM_041470618.1:174..1028"
                     /db_xref="GeneID:121355315"
ORIGIN      
        1 mfdrtrlpfv aldvlcvlla glplgvlnla kikpyqrgff cnddsikypf hdstitstvl
       61 ytvgftlpif siivgetlsv fynnlhsnsf vrnnyiatiy kgigtfifga aasqsltdia
      121 kysigrlrph fiavcqpdwt rincslgyie nftchgdkak isegrlsfys ghssfsmycm
      181 lfvalylqar mkgdwarlvr ptiqfglisa siyvglsrvs dykhhwsdvl tgliqgavva
      241 vlivvyvsdf fkvrgctfqp kedshttlhe tptngnhfgs nhqp
//
LOCUS       XP_041326553             283 aa            linear   VRT 06-MAY-2021
DEFINITION  phospholipid phosphatase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326553
VERSION     XP_041326553.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470619.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="phospholipid phosphatase 1 isoform X2"
                     /calculated_mol_wt=31636
     Region          98..236
                     /region_name="PAP2_wunen"
                     /note="PAP2, wunen subfamily. Most likely a family of
                     membrane associated phosphatidic acid phosphatases. Wunen
                     is a drosophila protein expressed in the central nervous
                     system, which provides repellent activity towards
                     primordial germ cells (PGCs), controls the...; cd03384"
                     /db_xref="CDD:239479"
     Site            order(120,127,169..171,217,223,227)
                     /site_type="active"
                     /db_xref="CDD:239479"
     CDS             1..283
                     /gene="PLPP1"
                     /coded_by="XM_041470619.1:174..1025"
                     /db_xref="GeneID:121355315"
ORIGIN      
        1 mfdrtrlpfv aldvlcvlla glpfailssr rtpfqrgvfc sdesirypyk edtisyklla
       61 giiipfsviv iivgetlsvf ynnlhsnsfv rnnyiatiyk gigtfifgaa asqsltdiak
      121 ysigrlrphf iavcqpdwtr incslgyien ftchgdkaki segrlsfysg hssfsmycml
      181 fvalylqarm kgdwarlvrp tiqfglisas iyvglsrvsd ykhhwsdvlt gliqgavvav
      241 livvyvsdff kvrgctfqpk edshttlhet ptngnhfgsn hqp
//
LOCUS       XP_041326555            1294 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger transcription factor Trps1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326555
VERSION     XP_041326555.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470621.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1294
                     /product="zinc finger transcription factor Trps1 isoform
                     X1"
                     /calculated_mol_wt=142887
     Region          908..964
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(909,912,930,933)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(918..919,921,930..940,961,963..964)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..1294
                     /gene="TRPS1"
                     /coded_by="XM_041470621.1:215..4099"
                     /db_xref="GeneID:121355316"
ORIGIN      
        1 mpyevnagyd ftnmvrkknp plrnvasege vqtlestgte seesgrkkef saeqmqentd
       61 qgdaaelsnk eelcmhvqep sssvkkdlks svlsekagfn yeshnkggnv psfphdevtd
      121 rnmlafsspa vggiceplks pqksdaddtq dvvctpsgda aetneehqms pkasdetvqv
      181 qsgqtdgqgs spvpmasknp qvpsdgglrl nkskadllvn dnpdtaplsp elqdfkcnic
      241 gygyygndpt dlikhfrkyh lglhnrtrqd aeldtkilal hnmvqfshsk dfqkvnrtvl
      301 sgvlqdinsq rpvllngtyd vqvtlggtfi gigrktpdcq gntkyfrckf cnftymgnss
      361 teleqhflqt hpnkmkaalp ssdsgktsek nsnkssptlr pcdsgdlgkw qdritvkagd
      421 dtpvgysvpi kpidssrqng tdttsyywck fcsfscesss slkllehysk qhggsqagsl
      481 hpdlndklsr gsvinqndla knadgelvtk tekgasvakk kdlsskgaed smvtsyncqf
      541 cdfryskshg pdvivvgpll rhyqqlhnih kctikhcqfc prglcspekh lgeitypfac
      601 rksncshcal lllhlspgvt gssrvkhqch qcsfstpdvd vlllhyenah egqasdvkpe
      661 tnalpgaegp ltlkenkehs ctkcdfttqv eeeisrhyrr vhncykcrqc sftavdtqsl
      721 lehfntvhcq emdittange dshgvssike epkidlkvys linpdpklge pisdsivkre
      781 kiedkevlke kgwtdspsdd lrnvtwrgtd ilrgspsytq tslglltpvs vgqeqpkplr
      841 dspnveaahl arpiyglave skgflqgvpa gaaekagqlt qpysgsgdgk akdesqsllr
      901 rrrgsgvfca nclttktslw rknanggyvc nacglyqklh stprplniik qnngeqiirr
      961 rtrkrlnpea lqaeqlnkqq rgsseeqvng splerrsedh lpeghqreiq lpslskyeat
     1021 gsltkshsaq qpilvsqtld ihkrmqplhi qikspqestg dpgnsssise gkgssergsp
     1081 iekymrpvkh pnysppgspi ekyqyplfgl pfvhndfqse adwlrfwsky klsvpgnphy
     1141 lshvpglpnp cqnyvpyptf nlpphfsavg sdndipldla ikhsrpgpta ngaskekska
     1201 ppnvknegpl nvvktekvdr stqdelstkc vhcgivflde vmyalhmsch gdsgpfqcsi
     1261 cqhlctdkyd ftthiqrglh rnnaqaekng kpke
//
LOCUS       XP_041326556            1061 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger transcription factor Trps1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326556
VERSION     XP_041326556.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470622.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1061
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1061
                     /product="zinc finger transcription factor Trps1 isoform
                     X2"
                     /calculated_mol_wt=117262
     Region          675..731
                     /region_name="ZnF_GATA"
                     /note="Zinc finger DNA binding domain; binds specifically
                     to DNA consensus sequence [AT]GATA[AG] promoter elements;
                     a subset of family members may also bind protein;
                     zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C;
                     cd00202"
                     /db_xref="CDD:238123"
     Site            order(676,679,697,700)
                     /site_type="other"
                     /note="zinc binding site [ion binding]"
                     /db_xref="CDD:238123"
     Site            order(685..686,688,697..707,728,730..731)
                     /site_type="DNA binding"
                     /note="DNA-binding region [nucleotide binding]"
                     /db_xref="CDD:238123"
     CDS             1..1061
                     /gene="TRPS1"
                     /coded_by="XM_041470622.1:215..3400"
                     /db_xref="GeneID:121355316"
ORIGIN      
        1 mpyevnagyd ftnmvrkknp plrnvasege vqtlestgte seesgrkkef saeqmqentd
       61 qgdaaelsnk eelcmhvqep sssvkkdlks svlsekagfn yeshnkggnv psfphdevtd
      121 rnmlafsspa vggiceplks pqksdaddtq dvvctpsgda aetneehqms pkasdetvqv
      181 qsgqtdgqgs spvpmasknp qvpsdgglrl nkskadllvn dnpdtaplsp elqdfkcnic
      241 gygyygndpt dlikhfrkyh lglhnrtrqd aeldtkilal hnmvqfshsk dfqkvnrtvl
      301 sgvlqdinsq rpvllngtyd vqvtlggtfi gigrktpdcq gntkyfrckf cnftymgnss
      361 teleqhflqt hpnkmkaalp ssdsgvtgss rvkhqchqcs fstpdvdvll lhyenahegq
      421 asdvkpetna lpgaegpltl kenkehsctk cdfttqveee isrhyrrvhn cykcrqcsft
      481 avdtqslleh fntvhcqemd ittangedsh gvssikeepk idlkvyslin pdpklgepis
      541 dsivkrekie dkevlkekgw tdspsddlrn vtwrgtdilr gspsytqtsl glltpvsvgq
      601 eqpkplrdsp nveaahlarp iyglaveskg flqgvpagaa ekagqltqpy sgsgdgkakd
      661 esqsllrrrr gsgvfcancl ttktslwrkn anggyvcnac glyqklhstp rplniikqnn
      721 geqiirrrtr krlnpealqa eqlnkqqrgs seeqvngspl errsedhlpe ghqreiqlps
      781 lskyeatgsl tkshsaqqpi lvsqtldihk rmqplhiqik spqestgdpg nsssisegkg
      841 ssergspiek ymrpvkhpny sppgspieky qyplfglpfv hndfqseadw lrfwskykls
      901 vpgnphylsh vpglpnpcqn yvpyptfnlp phfsavgsdn dipldlaikh srpgptanga
      961 skekskappn vknegplnvv ktekvdrstq delstkcvhc givfldevmy alhmschgds
     1021 gpfqcsicqh lctdkydftt hiqrglhrnn aqaekngkpk e
//
LOCUS       XP_041326557            1807 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326557
VERSION     XP_041326557.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470623.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1807
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X1"
                     /calculated_mol_wt=204718
     Region          28..196
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          664..763
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(688..694,709,712,742,746,749..750)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          834..957
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(862,868,923,925,933)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1638..1783
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1695,1699..1700,1702,1705,1733,1735,1737,1781..1782)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1807
                     /gene="RIMS2"
                     /coded_by="XM_041470623.1:162..5585"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkvke
       61 eqkpqptqwf pfsgitelvn nvlqpqqkqq nekepqtklh qqfemykeqv kkmgeesqqh
      121 qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr vslrsnkedk vvmwvcnlcr
      181 kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe kkaklqehpq yqgpsgdist
      241 qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi sreqsrrydq rderdeysqy
      301 atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr srrrskeypv eeedaqsree
      361 yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev srarherrhs dvslantele
      421 dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq gpspnrqrtt nhspptprrs
      481 piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr ndslssdqse svrppppkph
      541 ktkkggkmrq vslssseeel astpeytscd dveiesesvs ekgdsqrgkr ktseqavlsd
      601 sntlserqkk mvcfgghsle edlewsepqi kdsgvdtcss ttlneehshs ekhpvtwqps
      661 kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte sgrlcafitk vkkgsladtv
      721 ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel vvsrpigdip ripdsthaql
      781 esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls sqslsrrttp fvprvqiklw
      841 ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs dknkrrtktv kktlepkwnq
      901 tfiyspvhrr efrermleit lwdqarvree eseflgeili eletalldde phwyklqthd
      961 vsslplphps pylprrqlhg esptrrlqnk glysynsgsk risdsevsdy dcddgigvvs
     1021 dyrhngrdlq sstlsvpeqv mssnhcsrsg sphrgdsigr trswspsvpp pqsrnvdqgl
     1081 rgtrstaahy ntlsrmdrhr avddhyspdr eshyvtlprs rytqssdhhy rdvsqdhtmy
     1141 plfcedairl lrsrtmcrty segayydler rtrqerrvpn syyddtaytp erwyngassw
     1201 addivngsae kygsetvdvf adeasysete lieeevrnce aadrqpyqrs rsteqrpvle
     1261 rtnsrsrste rpdsnlirsm pslmtgrsap pspalprshp rtgsvqtsps stpvvgrrgr
     1321 qlpqlppkgt lernngdkei esyeevtwed qqkkvngtit ddkplpkkkh hseteeaess
     1381 rrtnseekkt dpengdtgal dveernrqmk mskykqvags dsrleqdyhs kyrsgrdphr
     1441 gsdnvsnkss dsdvsdvsav srtssasrfs stsymsvqse rprgnkkisv ftskmqsrqm
     1501 aisgknmtks tsisgemytl ekndgsqsdt avgtvgggsk krrssigakm vaivglsrks
     1561 rstsqlsqte aggkklrstv qrstetglav emrnwmtrqa srestdgsmn syssegnlif
     1621 pgvrlaadsq fsdfldglgp aqlvgrqtla tpsmgdiqvg mmdkkgqlev eiirarglvv
     1681 kpgsktlpap yvkvylleng vciakkktkv arktleplyq qllsfeespq gkvlqiivwg
     1741 dygrmdhksf mgvaqillde ldlsnmvigw fklfppsslv dptlapltrr asqsslesst
     1801 gpsyars
//
LOCUS       XP_041326558            1604 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326558
VERSION     XP_041326558.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470624.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1604
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X2"
                     /calculated_mol_wt=181061
     Region          28..196
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          664..763
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(688..694,709,712,742,746,749..750)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          815..941
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(846,852,907,909,917)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1435..1580
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1492,1496..1497,1499,1502,1530,1532,1534,1578..1579)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1604
                     /gene="RIMS2"
                     /coded_by="XM_041470624.1:162..4976"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkvke
       61 eqkpqptqwf pfsgitelvn nvlqpqqkqq nekepqtklh qqfemykeqv kkmgeesqqh
      121 qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr vslrsnkedk vvmwvcnlcr
      181 kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe kkaklqehpq yqgpsgdist
      241 qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi sreqsrrydq rderdeysqy
      301 atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr srrrskeypv eeedaqsree
      361 yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev srarherrhs dvslantele
      421 dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq gpspnrqrtt nhspptprrs
      481 piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr ndslssdqse svrppppkph
      541 ktkkggkmrq vslssseeel astpeytscd dveiesesvs ekgdsqrgkr ktseqavlsd
      601 sntlserqkk mvcfgghsle edlewsepqi kdsgvdtcss ttlneehshs ekhpvtwqps
      661 kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte sgrlcafitk vkkgsladtv
      721 ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel vvsrpigdip ripdsthaql
      781 esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls iklwydkvgh qlivtilgak
      841 dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep kwnqtfiysp vhrrefrerm
      901 leitlwdqar vreeeseflg eilieletal lddephwykl qthdvsslpl phpspylprr
      961 qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn grdlqsstls vpeqvmssnh
     1021 csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs taahyntlsr mdrhravddh
     1081 yspdrernce aadrqpyqrs rsteqrpvle rtnsrsrste rpdsnlirsm pslmtgrsap
     1141 pspalprshp rtgsvqtsps stpvvgrrgr qlpqlppkgt lerkeaessr rtnsgaldve
     1201 ernrqmkmsk ykqvagsdsr leqdyhskyr sgrdphrgsd nvsnkssdsd vsdvsavsrt
     1261 ssasrfssts ymsvqserpr gnkkisvfts kmqsrqmais gknmtkstsi sgemytlekn
     1321 dgsqsdtavg tvgggskkrr ssigakmvai vglsrksrst sqlsqteagg kklrstvqrs
     1381 tetglavemr nwmtrqasre stdgsmnsys segnlifpgv rlaadsqfsd fldglgpaql
     1441 vgrqtlatps mgdiqvgmmd kkgqleveii rarglvvkpg sktlpapyvk vyllengvci
     1501 akkktkvark tleplyqqll sfeespqgkv lqiivwgdyg rmdhksfmgv aqilldeldl
     1561 snmvigwfkl fppsslvdpt lapltrrasq sslesstgps yars
//
LOCUS       XP_041326559            1571 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326559
VERSION     XP_041326559.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470625.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1571
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X3"
                     /calculated_mol_wt=177356
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          620..719
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(644..650,665,668,698,702,705..706)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          771..897
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(802,808,863,865,873)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          978..>1173
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1402..1547
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1459,1463..1464,1466,1469,1497,1499,1501,1545..1546)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1571
                     /gene="RIMS2"
                     /coded_by="XM_041470625.1:162..4877"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 sqrgkrktse qavlsdsntl serqkkmvcf gghsleedle wsepqikdsg vdtcssttln
      601 eehshsekhp vtwqpskdgd rligrillnk rlkdgsvprd sgamlglkvv ggkmtesgrl
      661 cafitkvkkg sladtvghlr pgdevlewng rilqgatfee vyniileskp epqvelvvsr
      721 pigdipripd sthaqlesss ssfesqkmdr psisvtspms pgmlrdvpqf lsgqlsiklw
      781 ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs dknkrrtktv kktlepkwnq
      841 tfiyspvhrr efrermleit lwdqarvree eseflgeili eletalldde phwyklqthd
      901 vsslplphps pylprrqlhg esptrrlqrs krisdsevsd ydcddgigvv sdyrhngrdl
      961 qsstlsvpeq vmssnhcsrs gsphrgdsig rtrswspsvp ppqsrnvdqg lrgtrstaah
     1021 yntlsrmdrh ravddhyspd reshyvtlpr srytqssdhh yrdvrnceaa drqpyqrsrs
     1081 teqrpvlert nsrsrsterp dsnlirsmps lmtgrsapps palprshprt gsvqtspsst
     1141 pvvgrrgrql pqlppkgtle rsaldveern rqmkmskykq vagsdsrleq dyhskyrsgr
     1201 dphrgsdnvs nkssdsdvsd vsavsrtssa srfsstsyms vqserprgnk kisvftskmq
     1261 srqmaisgkn mtkstsisge mytlekndgs qsdtavgtvg ggskkrrssi gakmvaivgl
     1321 srksrstsql sqteaggkkl rstvqrstet glavemrnwm trqasrestd gsmnsysseg
     1381 nlifpgvrla adsqfsdfld glgpaqlvgr qtlatpsmgd iqvgmmdkkg qleveiirar
     1441 glvvkpgskt lpapyvkvyl lengvciakk ktkvarktle plyqqllsfe espqgkvlqi
     1501 ivwgdygrmd hksfmgvaqi lldeldlsnm vigwfklfpp sslvdptlap ltrrasqssl
     1561 esstgpsyar s
//
LOCUS       XP_041326560            1589 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326560
VERSION     XP_041326560.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470626.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1589
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X4"
                     /calculated_mol_wt=179126
     Region          28..156
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          624..723
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(648..654,669,672,702,706,709..710)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          794..917
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(822,828,883,885,893)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1420..1565
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1477,1481..1482,1484,1487,1515,1517,1519,1563..1564)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1589
                     /gene="RIMS2"
                     /coded_by="XM_041470626.1:162..4931"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkedk vvmwvcnlcr kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe
      181 kkaklqehpq yqgpsgdist qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi
      241 sreqsrrydq rderdeysqy atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr
      301 srrrskeypv eeedaqsree yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev
      361 srarherrhs dvslantele dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq
      421 gpspnrqrtt nhspptprrs piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr
      481 ndslssdqse svrppppkph ktkkggkmrq vslssseeel astpeytscd dveiesesvs
      541 ekgdsqrgkr ktseqavlsd sntlserqkk mvcfgghsle edlewsepqi kdsgvdtcss
      601 ttlneehshs ekhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      661 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      721 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      781 sqslsrrttp fvprvqiklw ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs
      841 dknkrrtktv kktlepkwnq tfiyspvhrr efrermleit lwdqarvree eseflgeili
      901 eletalldde phwyklqthd vsslplphps pylprrqlhg esptrrlqnk glysynsgsk
      961 risdsevsdy dcddgigvvs dyrhngrdlq sstlsvpeqv mssnhcsrsg sphrgdsigr
     1021 trswspsvpp pqsrnvdqgl rgtrstaahy ntlsrmdrhr avddhyspdr ernceaadrq
     1081 pyqrsrsteq rpvlertnsr srsterpdsn lirsmpslmt grsappspal prshprtgsv
     1141 qtspsstpvv grrgrqlpql ppkgtlerke aessrrtnsg aldveernrq mkmskykqva
     1201 gsdsrleqdy hskyrsgrdp hrgsdnvsnk ssdsdvsdvs avsrtssasr fsstsymsvq
     1261 serprgnkki svftskmqsr qmaisgknmt kstsisgemy tlekndgsqs dtavgtvggg
     1321 skkrrssiga kmvaivglsr ksrstsqlsq teaggkklrs tvqrstetgl avemrnwmtr
     1381 qasrestdgs mnsyssegnl ifpgvrlaad sqfsdfldgl gpaqlvgrqt latpsmgdiq
     1441 vgmmdkkgql eveiirargl vvkpgsktlp apyvkvylle ngvciakkkt kvarktlepl
     1501 yqqllsfees pqgkvlqiiv wgdygrmdhk sfmgvaqill deldlsnmvi gwfklfppss
     1561 lvdptlaplt rrasqssles stgpsyars
//
LOCUS       XP_041326561            1549 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X5
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326561
VERSION     XP_041326561.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470627.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1549
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X5"
                     /calculated_mol_wt=174669
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          620..719
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(644..650,665,668,698,702,705..706)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          771..897
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(802,808,863,865,873)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <958..>1150
                     /region_name="2A1904"
                     /note="K+-dependent Na+/Ca+ exchanger; TIGR00927"
                     /db_xref="CDD:273344"
     Region          1380..1525
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1437,1441..1442,1444,1447,1475,1477,1479,1523..1524)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1549
                     /gene="RIMS2"
                     /coded_by="XM_041470627.1:162..4811"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 sqrgkrktse qavlsdsntl serqkkmvcf gghsleedle wsepqikdsg vdtcssttln
      601 eehshsekhp vtwqpskdgd rligrillnk rlkdgsvprd sgamlglkvv ggkmtesgrl
      661 cafitkvkkg sladtvghlr pgdevlewng rilqgatfee vyniileskp epqvelvvsr
      721 pigdipripd sthaqlesss ssfesqkmdr psisvtspms pgmlrdvpqf lsgqlsiklw
      781 ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs dknkrrtktv kktlepkwnq
      841 tfiyspvhrr efrermleit lwdqarvree eseflgeili eletalldde phwyklqthd
      901 vsslplphps pylprrqlhg esptrrlqrs krisdsevsd ydcddgigvv sdyrhngrdl
      961 qsstlsvpeq vmssnhcsrs gsphrgdsig rtrswspsvp ppqsrnvdqg lrgtrstaah
     1021 yntlsrmdrh ravddhyspd rernceaadr qpyqrsrste qrpvlertns rsrsterpds
     1081 nlirsmpslm tgrsappspa lprshprtgs vqtspsstpv vgrrgrqlpq lppkgtlers
     1141 aldveernrq mkmskykqva gsdsrleqdy hskyrsgrdp hrgsdnvsnk ssdsdvsdvs
     1201 avsrtssasr fsstsymsvq serprgnkki svftskmqsr qmaisgknmt kstsisgemy
     1261 tlekndgsqs dtavgtvggg skkrrssiga kmvaivglsr ksrstsqlsq teaggkklrs
     1321 tvqrstetgl avemrnwmtr qasrestdgs mnsyssegnl ifpgvrlaad sqfsdfldgl
     1381 gpaqlvgrqt latpsmgdiq vgmmdkkgql eveiirargl vvkpgsktlp apyvkvylle
     1441 ngvciakkkt kvarktlepl yqqllsfees pqgkvlqiiv wgdygrmdhk sfmgvaqill
     1501 deldlsnmvi gwfklfppss lvdptlaplt rrasqssles stgpsyars
//
LOCUS       XP_041326562            1554 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326562
VERSION     XP_041326562.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470628.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1554
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X6"
                     /calculated_mol_wt=175630
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          573..672
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(597..603,618,621,651,655,658..659)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          743..866
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(771,777,832,834,842)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1385..1530
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1442,1446..1447,1449,1452,1480,1482,1484,1528..1529)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1554
                     /gene="RIMS2"
                     /coded_by="XM_041470628.1:162..4826"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 mdynwldhts whsseaspms lhpvtwqpsk dgdrligril lnkrlkdgsv prdsgamlgl
      601 kvvggkmtes grlcafitkv kkgsladtvg hlrpgdevle wngrilqgat feevyniile
      661 skpepqvelv vsrpigdipr ipdsthaqle sssssfesqk mdrpsisvts pmspgmlrdv
      721 pqflsgqlss qslsrrttpf vprvqiklwy dkvghqlivt ilgakdlpsr edgrprnpyv
      781 kiyflpdrsd knkrrtktvk ktlepkwnqt fiyspvhrre frermleitl wdqarvreee
      841 seflgeilie letallddep hwyklqthdv sslplphpsp ylprrqlhge sptrrlqrsk
      901 risdsevsdy dcddgigvvs dyrhngrdlq sstlsvpeqv mssnhcsrsg sphrgdsigr
      961 trswspsvpp pqsrnvdqgl rgtrstaahy ntlsrmdrhr avddhyspdr eshyvtlprs
     1021 rytqssdhhy rdvrnceaad rqpyqrsrst eqrpvlertn srsrsterpd snlirsmpsl
     1081 mtgrsappsp alprshprtg svqtspsstp vvgrrgrqlp qlppkgtler miteeaessr
     1141 rtnsgaldve ernrqmkmsk ykqvagsdsr leqdyhskyr sgrdphrgsd nvsnkssdsd
     1201 vsdvsavsrt ssasrfssts ymsvqserpr gnkkisvfts kmqsrqmais gknmtkstsi
     1261 sgemytlekn dgsqsdtavg tvgggskkrr ssigakmvai vglsrksrst sqlsqteagg
     1321 kklrstvqrs tetglavemr nwmtrqasre stdgsmnsys segnlifpgv rlaadsqfsd
     1381 fldglgpaql vgrqtlatps mgdiqvgmmd kkgqleveii rarglvvkpg sktlpapyvk
     1441 vyllengvci akkktkvark tleplyqqll sfeespqgkv lqiivwgdyg rmdhksfmgv
     1501 aqilldeldl snmvigwfkl fppsslvdpt lapltrrasq sslesstgps yars
//
LOCUS       XP_041326563            1546 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X7
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326563
VERSION     XP_041326563.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470629.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1546
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X7"
                     /calculated_mol_wt=174723
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          573..672
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(597..603,618,621,651,655,658..659)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          724..850
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(755,761,816,818,826)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1377..1522
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1434,1438..1439,1441,1444,1472,1474,1476,1520..1521)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1546
                     /gene="RIMS2"
                     /coded_by="XM_041470629.1:162..4802"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 mdynwldhts whsseaspms lhpvtwqpsk dgdrligril lnkrlkdgsv prdsgamlgl
      601 kvvggkmtes grlcafitkv kkgsladtvg hlrpgdevle wngrilqgat feevyniile
      661 skpepqvelv vsrpigdipr ipdsthaqle sssssfesqk mdrpsisvts pmspgmlrdv
      721 pqflsgqlsi klwydkvghq livtilgakd lpsredgrpr npyvkiyflp drsdknkrrt
      781 ktvkktlepk wnqtfiyspv hrrefrerml eitlwdqarv reeeseflge ilieletall
      841 ddephwyklq thdvsslplp hpspylprrq lhgesptrrl qrskrisdse vsdydcddgi
      901 gvvsdyrhng rdlqsstlsv peqvmssnhc srsgsphrgd sigrtrswsp svpppqsrnv
      961 dqglrgtrst aahyntlsrm drhravddhy spdreshyvt lprsrytqss dhhyrdvrnc
     1021 eaadrqpyqr srsteqrpvl ertnsrsrst erpdsnlirs mpslmtgrsa ppspalprsh
     1081 prtgsvqtsp sstpvvgrrg rqlpqlppkg tlernngdke iesyeeeaes srrtnsgald
     1141 veernrqmkm skykqvagsd srleqdyhsk yrsgrdphrg sdnvsnkssd sdvsdvsavs
     1201 rtssasrfss tsymsvqser prgnkkisvf tskmqsrqma isgknmtkst sisgemytle
     1261 kndgsqsdta vgtvgggskk rrssigakmv aivglsrksr stsqlsqtea ggkklrstvq
     1321 rstetglave mrnwmtrqas restdgsmns yssegnlifp gvrlaadsqf sdfldglgpa
     1381 qlvgrqtlat psmgdiqvgm mdkkgqleve iirarglvvk pgsktlpapy vkvyllengv
     1441 ciakkktkva rktleplyqq llsfeespqg kvlqiivwgd ygrmdhksfm gvaqilldel
     1501 dlsnmvigwf klfppsslvd ptlapltrra sqsslesstg psyars
//
LOCUS       XP_041326564            1529 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X8
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326564
VERSION     XP_041326564.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470630.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1529
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X8"
                     /calculated_mol_wt=172595
     Region          28..192
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          <146..190
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cl28890"
                     /db_xref="CDD:333710"
     Region          660..759
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(684..690,705,708,738,742,745..746)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          811..937
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(842,848,903,905,913)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <942..>1113
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1360..1505
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1417,1421..1422,1424,1427,1455,1457,1459,1503..1504)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1529
                     /gene="RIMS2"
                     /coded_by="XM_041470630.1:162..4751"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkvke
       61 eqkpqptqwf pfsgitelvn nvlqpqqkqq nekepqtklh qqfemykeqv kkmgeesqqh
      121 qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr vslrsnkvmw vcnlcrkqqe
      181 iltksgawfy nsgshapqqp dqegsralrn eeapqekkak lqehpqyqgp sgdistqald
      241 knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq srrydqrder deysqyatsd
      301 samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr skeypveeed aqsreeyerq
      361 rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar herrhsdvsl anteledsrm
      421 smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp nrqrttnhsp ptprrspipl
      481 erpdmrrsds lrkqhhldps savrktkrek metmlrndsl ssdqsesvrp pppkphktkk
      541 ggkmrqvsls sseeelastp eytscddvei esesvsekgd sqrgkrktse qavlsdsntl
      601 serqkkmvcf gghsleedle wsepqikdsg vdtcssttln eehshsekhp vtwqpskdgd
      661 rligrillnk rlkdgsvprd sgamlglkvv ggkmtesgrl cafitkvkkg sladtvghlr
      721 pgdevlewng rilqgatfee vyniileskp epqvelvvsr pigdipripd sthaqlesss
      781 ssfesqkmdr psisvtspms pgmlrdvpqf lsgqlsiklw ydkvghqliv tilgakdlps
      841 redgrprnpy vkiyflpdrs dknkrrtktv kktlepkwnq tfiyspvhrr efrermleit
      901 lwdqarvree eseflgeili eletalldde phwyklqthd vsslplphps pylprrqlhg
      961 esptrrlqrs krisdsevsd ydcddgigvv sdyrhngrdl qsstlsvpeq vmssnhcsrs
     1021 gsphrgdsig rtrswspsvp ppqsrnvdqg lrgtrstaah yntlsrmdrh ravddhyspd
     1081 rershprtgs vqtspsstpv vgrrgrqlpq lppkgtlers aldveernrq mkmskykqva
     1141 gsdsrleqdy hskyrsgrdp hrgsdnvsnk ssdsdvsdvs avsrtssasr fsstsymsvq
     1201 serprgnkki svftskmqsr qmaisgknmt kstsisgemy tlekndgsqs dtavgtvggg
     1261 skkrrssiga kmvaivglsr ksrstsqlsq teaggkklrs tvqrstetgl avemrnwmtr
     1321 qasrestdgs mnsyssegnl ifpgvrlaad sqfsdfldgl gpaqlvgrqt latpsmgdiq
     1381 vgmmdkkgql eveiirargl vvkpgsktlp apyvkvylle ngvciakkkt kvarktlepl
     1441 yqqllsfees pqgkvlqiiv wgdygrmdhk sfmgvaqill deldlsnmvi gwfklfppss
     1501 lvdptlaplt rrasqssles stgpsyars
//
LOCUS       XP_041326566            1517 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X9
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326566
VERSION     XP_041326566.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470632.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1517
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X9"
                     /calculated_mol_wt=171227
     Region          28..156
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          577..676
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(601..607,622,625,655,659,662..663)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          728..854
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(759,765,820,822,830)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1348..1493
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1405,1409..1410,1412,1415,1443,1445,1447,1491..1492)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1517
                     /gene="RIMS2"
                     /coded_by="XM_041470632.1:162..4715"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkedk vvmwvcnlcr kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe
      181 kkaklqehpq yqgpsgdist qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi
      241 sreqsrrydq rderdeysqy atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr
      301 srrrskeypv eeedaqsree yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev
      361 srarherrhs dvslantele dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq
      421 gpspnrqrtt nhspptprrs piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr
      481 ndslssdqse svrppppkph ktkkggkmrq vslssseeel astpeytscd dveiesesvs
      541 ekgdmdynwl dhtswhssea spmslhpvtw qpskdgdrli grillnkrlk dgsvprdsga
      601 mlglkvvggk mtesgrlcaf itkvkkgsla dtvghlrpgd evlewngril qgatfeevyn
      661 iileskpepq velvvsrpig dipripdsth aqlesssssf esqkmdrpsi svtspmspgm
      721 lrdvpqflsg qlsiklwydk vghqlivtil gakdlpsred grprnpyvki yflpdrsdkn
      781 krrtktvkkt lepkwnqtfi yspvhrrefr ermleitlwd qarvreeese flgeiliele
      841 tallddephw yklqthdvss lplphpspyl prrqlhgesp trrlqrskri sdsevsdydc
      901 ddgigvvsdy rhngrdlqss tlsvpeqvms snhcsrsgsp hrgdsigrtr swspsvpppq
      961 srnvdqglrg trstaahynt lsrmdrhrav ddhyspdrer nceaadrqpy qrsrsteqrp
     1021 vlertnsrsr sterpdsnli rsmpslmtgr sappspalpr shprtgsvqt spsstpvvgr
     1081 rgrqlpqlpp kgtlerkeae ssrrtnsgal dveernrqmk mskykqvags dsrleqdyhs
     1141 kyrsgrdphr gsdnvsnkss dsdvsdvsav srtssasrfs stsymsvqse rprgnkkisv
     1201 ftskmqsrqm aisgknmtks tsisgemytl ekndgsqsdt avgtvgggsk krrssigakm
     1261 vaivglsrks rstsqlsqte aggkklrstv qrstetglav emrnwmtrqa srestdgsmn
     1321 syssegnlif pgvrlaadsq fsdfldglgp aqlvgrqtla tpsmgdiqvg mmdkkgqlev
     1381 eiirarglvv kpgsktlpap yvkvylleng vciakkktkv arktleplyq qllsfeespq
     1441 gkvlqiivwg dygrmdhksf mgvaqillde ldlsnmvigw fklfppsslv dptlapltrr
     1501 asqsslesst gpsyars
//
LOCUS       XP_041326567            1417 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X10
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326567
VERSION     XP_041326567.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470633.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1417
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X10"
                     /calculated_mol_wt=160677
     Region          28..192
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          <146..190
                     /region_name="FYVE_like_SF"
                     /note="FYVE domain like superfamily; cl28890"
                     /db_xref="CDD:333710"
     Region          660..759
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(684..690,705,708,738,742,745..746)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          811..937
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(842,848,903,905,913)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1248..1393
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1305,1309..1310,1312,1315,1343,1345,1347,1391..1392)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1417
                     /gene="RIMS2"
                     /coded_by="XM_041470633.1:162..4415"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkvke
       61 eqkpqptqwf pfsgitelvn nvlqpqqkqq nekepqtklh qqfemykeqv kkmgeesqqh
      121 qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr vslrsnkvmw vcnlcrkqqe
      181 iltksgawfy nsgshapqqp dqegsralrn eeapqekkak lqehpqyqgp sgdistqald
      241 knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq srrydqrder deysqyatsd
      301 samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr skeypveeed aqsreeyerq
      361 rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar herrhsdvsl anteledsrm
      421 smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp nrqrttnhsp ptprrspipl
      481 erpdmrrsds lrkqhhldps savrktkrek metmlrndsl ssdqsesvrp pppkphktkk
      541 ggkmrqvsls sseeelastp eytscddvei esesvsekgd sqrgkrktse qavlsdsntl
      601 serqkkmvcf gghsleedle wsepqikdsg vdtcssttln eehshsekhp vtwqpskdgd
      661 rligrillnk rlkdgsvprd sgamlglkvv ggkmtesgrl cafitkvkkg sladtvghlr
      721 pgdevlewng rilqgatfee vyniileskp epqvelvvsr pigdipripd sthaqlesss
      781 ssfesqkmdr psisvtspms pgmlrdvpqf lsgqlsiklw ydkvghqliv tilgakdlps
      841 redgrprnpy vkiyflpdrs dknkrrtktv kktlepkwnq tfiyspvhrr efrermleit
      901 lwdqarvree eseflgeili eletalldde phwyklqthd vsslplphps pylprrqlhg
      961 esptrrlqrs krisdsevsd ydcddgigvv sdyrhngrdl qsstlsvpeq vmssnhcsrs
     1021 gsphrgdsig rtrswspsvp ppqsrnvdqg lrgtrstaah yntlsrmdrh ravddhyspd
     1081 rernceaadr qpyqrsrste qrpvlertns rsrsterpds nlirsmpslm tgrsappspa
     1141 lprshprtgs vqtspsstpv vgrrgrqlpq lppkgtlerk aggkklrstv qrstetglav
     1201 emrnwmtrqa srestdgsmn syssegnlif pgvrlaadsq fsdfldglgp aqlvgrqtla
     1261 tpsmgdiqvg mmdkkgqlev eiirarglvv kpgsktlpap yvkvylleng vciakkktkv
     1321 arktleplyq qllsfeespq gkvlqiivwg dygrmdhksf mgvaqillde ldlsnmvigw
     1381 fklfppsslv dptlapltrr asqsslesst gpsyars
//
LOCUS       XP_041326568            1399 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X11
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326568
VERSION     XP_041326568.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470634.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1399
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1399
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X11"
                     /calculated_mol_wt=158659
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          620..719
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(644..650,665,668,698,702,705..706)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          771..897
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(802,808,863,865,873)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <973..1174
                     /region_name="PHA03309"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:165564"
     Region          1230..1375
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1287,1291..1292,1294,1297,1325,1327,1329,1373..1374)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1399
                     /gene="RIMS2"
                     /coded_by="XM_041470634.1:162..4361"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 sqrgkrktse qavlsdsntl serqkkmvcf gghsleedle wsepqikdsg vdtcssttln
      601 eehshsekhp vtwqpskdgd rligrillnk rlkdgsvprd sgamlglkvv ggkmtesgrl
      661 cafitkvkkg sladtvghlr pgdevlewng rilqgatfee vyniileskp epqvelvvsr
      721 pigdipripd sthaqlesss ssfesqkmdr psisvtspms pgmlrdvpqf lsgqlsiklw
      781 ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs dknkrrtktv kktlepkwnq
      841 tfiyspvhrr efrermleit lwdqarvree eseflgeili eletalldde phwyklqthd
      901 vsslplphps pylprrqlhg esptrrlqrs krisdsevsd ydcddgigvv sdyrhngrdl
      961 qsstlsvpeq vmssnhcsrs gsphrgdsig rtrswspsvp ppqsrnvdqg lrgtrstaah
     1021 yntlsrmdrh ravddhyspd reshyvtlpr srytqssdhh yrdvrnceaa drqpyqrsrs
     1081 teqrpvlert nsrsrsterp dsnlirsmps lmtgrsapps palprshprt gsvqtspsst
     1141 pvvgrrgrql pqlppkgtle rkaggkklrs tvqrstetgl avemrnwmtr qasrestdgs
     1201 mnsyssegnl ifpgvrlaad sqfsdfldgl gpaqlvgrqt latpsmgdiq vgmmdkkgql
     1261 eveiirargl vvkpgsktlp apyvkvylle ngvciakkkt kvarktlepl yqqllsfees
     1321 pqgkvlqiiv wgdygrmdhk sfmgvaqill deldlsnmvi gwfklfppss lvdptlaplt
     1381 rrasqssles stgpsyars
//
LOCUS       XP_041326569            1403 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X12
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326569
VERSION     XP_041326569.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470635.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1403
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X12"
                     /calculated_mol_wt=159131
     Region          28..156
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          624..723
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(648..654,669,672,702,706,709..710)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          775..901
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(806,812,867,869,877)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <977..1178
                     /region_name="PHA03309"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:165564"
     Region          1234..1379
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1291,1295..1296,1298,1301,1329,1331,1333,1377..1378)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1403
                     /gene="RIMS2"
                     /coded_by="XM_041470635.1:162..4373"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkedk vvmwvcnlcr kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe
      181 kkaklqehpq yqgpsgdist qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi
      241 sreqsrrydq rderdeysqy atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr
      301 srrrskeypv eeedaqsree yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev
      361 srarherrhs dvslantele dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq
      421 gpspnrqrtt nhspptprrs piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr
      481 ndslssdqse svrppppkph ktkkggkmrq vslssseeel astpeytscd dveiesesvs
      541 ekgdsqrgkr ktseqavlsd sntlserqkk mvcfgghsle edlewsepqi kdsgvdtcss
      601 ttlneehshs ekhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      661 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      721 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      781 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      841 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      901 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      961 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
     1021 taahyntlsr mdrhravddh yspdreshyv tlprsrytqs sdhhyrdvrn ceaadrqpyq
     1081 rsrsteqrpv lertnsrsrs terpdsnlir smpslmtgrs appspalprs hprtgsvqts
     1141 psstpvvgrr grqlpqlppk gtlerkaggk klrstvqrst etglavemrn wmtrqasres
     1201 tdgsmnsyss egnlifpgvr laadsqfsdf ldglgpaqlv grqtlatpsm gdiqvgmmdk
     1261 kgqleveiir arglvvkpgs ktlpapyvkv yllengvcia kkktkvarkt leplyqqlls
     1321 feespqgkvl qiivwgdygr mdhksfmgva qilldeldls nmvigwfklf ppsslvdptl
     1381 apltrrasqs slesstgpsy ars
//
LOCUS       XP_041326570            1374 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X13
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326570
VERSION     XP_041326570.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470636.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1374
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1374
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X13"
                     /calculated_mol_wt=156019
     Region          28..196
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          617..716
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(641..647,662,665,695,699,702..703)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          768..894
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(799,805,860,862,870)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1205..1350
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1262,1266..1267,1269,1272,1300,1302,1304,1348..1349)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1374
                     /gene="RIMS2"
                     /coded_by="XM_041470636.1:162..4286"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkvke
       61 eqkpqptqwf pfsgitelvn nvlqpqqkqq nekepqtklh qqfemykeqv kkmgeesqqh
      121 qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr vslrsnkedk vvmwvcnlcr
      181 kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe kkaklqehpq yqgpsgdist
      241 qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi sreqsrrydq rderdeysqy
      301 atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr srrrskeypv eeedaqsree
      361 yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev srarherrhs dvslantele
      421 dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq gpspnrqrtt nhspptprrs
      481 piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr ndslssdqse svrppppkph
      541 ktkkggkmrq vslssseeel astpeytscd dveiesesvs ekgdmdynwl dhtswhssea
      601 spmslhpvtw qpskdgdrli grillnkrlk dgsvprdsga mlglkvvggk mtesgrlcaf
      661 itkvkkgsla dtvghlrpgd evlewngril qgatfeevyn iileskpepq velvvsrpig
      721 dipripdsth aqlesssssf esqkmdrpsi svtspmspgm lrdvpqflsg qlsiklwydk
      781 vghqlivtil gakdlpsred grprnpyvki yflpdrsdkn krrtktvkkt lepkwnqtfi
      841 yspvhrrefr ermleitlwd qarvreeese flgeiliele tallddephw yklqthdvss
      901 lplphpspyl prrqlhgesp trrlqrskri sdsevsdydc ddgigvvsdy rhngrdlqss
      961 tlsvpeqvms snhcsrsgsp hrgdsigrtr swspsvpppq srnvdqglrg trstaahynt
     1021 lsrmdrhrav ddhyspdrer nceaadrqpy qrsrsteqrp vlertnsrsr sterpdsnli
     1081 rsmpslmtgr sappspalpr shprtgsvqt spsstpvvgr rgrqlpqlpp kgtlerkagg
     1141 kklrstvqrs tetglavemr nwmtrqasre stdgsmnsys segnlifpgv rlaadsqfsd
     1201 fldglgpaql vgrqtlatps mgdiqvgmmd kkgqleveii rarglvvkpg sktlpapyvk
     1261 vyllengvci akkktkvark tleplyqqll sfeespqgkv lqiivwgdyg rmdhksfmgv
     1321 aqilldeldl snmvigwfkl fppsslvdpt lapltrrasq sslesstgps yars
//
LOCUS       XP_041326571            1365 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X14
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326571
VERSION     XP_041326571.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470637.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1365
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1365
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X14"
                     /calculated_mol_wt=154579
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          554..677
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(582,588,643,645,653)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1196..1341
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1253,1257..1258,1260,1263,1291,1293,1295,1339..1340)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1365
                     /gene="RIMS2"
                     /coded_by="XM_041470637.1:1..4098"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 sqslsrrttp fvprvqiklw ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs
      601 dknkrrtktv kktlepkwnq tfiyspvhrr efrermleit lwdqarvree eseflgeili
      661 eletalldde phwyklqthd vsslplphps pylprrqlhg esptrrlqrs krisdsevsd
      721 ydcddgigvv sdyrhngrdl qsstlsvpeq vmssnhcsrs gsphrgdsig rtrswspsvp
      781 ppqsrnvdqg lrgtrstaah yntlsrmdrh ravddhyspd reshyvtlpr srytqssdhh
      841 yrdvrnceaa drqpyqrsrs teqrpvlert nsrsrsterp dsnlirsmps lmtgrsapps
      901 palprshprt gsvqtspsst pvvgrrgrql pqlppkgtle rmiteeaess rrtnsgaldv
      961 eernrqmkms kykqvagsds rleqdyhsky rsgrdphrgs dnvsnkssds dvsdvsavsr
     1021 tssasrfsst symsvqserp rgnkkisvft skmqsrqmai sgknmtksts isgemytlek
     1081 ndgsqsdtav gtvgggskkr rssigakmva ivglsrksrs tsqlsqteag gkklrstvqr
     1141 stetglavem rnwmtrqasr estdgsmnsy ssegnlifpg vrlaadsqfs dfldglgpaq
     1201 lvgrqtlatp smgdiqvgmm dkkgqlevei irarglvvkp gsktlpapyv kvyllengvc
     1261 iakkktkvar ktleplyqql lsfeespqgk vlqiivwgdy grmdhksfmg vaqilldeld
     1321 lsnmvigwfk lfppsslvdp tlapltrras qsslesstgp syars
//
LOCUS       XP_041326572            1356 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X15
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326572
VERSION     XP_041326572.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470638.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1356
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X15"
                     /calculated_mol_wt=154001
     Region          28..156
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          577..676
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(601..607,622,625,655,659,662..663)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          728..854
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(759,765,820,822,830)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <930..1131
                     /region_name="PHA03309"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:165564"
     Region          1187..1332
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1244,1248..1249,1251,1254,1282,1284,1286,1330..1331)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1356
                     /gene="RIMS2"
                     /coded_by="XM_041470638.1:162..4232"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkedk vvmwvcnlcr kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe
      181 kkaklqehpq yqgpsgdist qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi
      241 sreqsrrydq rderdeysqy atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr
      301 srrrskeypv eeedaqsree yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev
      361 srarherrhs dvslantele dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq
      421 gpspnrqrtt nhspptprrs piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr
      481 ndslssdqse svrppppkph ktkkggkmrq vslssseeel astpeytscd dveiesesvs
      541 ekgdmdynwl dhtswhssea spmslhpvtw qpskdgdrli grillnkrlk dgsvprdsga
      601 mlglkvvggk mtesgrlcaf itkvkkgsla dtvghlrpgd evlewngril qgatfeevyn
      661 iileskpepq velvvsrpig dipripdsth aqlesssssf esqkmdrpsi svtspmspgm
      721 lrdvpqflsg qlsiklwydk vghqlivtil gakdlpsred grprnpyvki yflpdrsdkn
      781 krrtktvkkt lepkwnqtfi yspvhrrefr ermleitlwd qarvreeese flgeiliele
      841 tallddephw yklqthdvss lplphpspyl prrqlhgesp trrlqrskri sdsevsdydc
      901 ddgigvvsdy rhngrdlqss tlsvpeqvms snhcsrsgsp hrgdsigrtr swspsvpppq
      961 srnvdqglrg trstaahynt lsrmdrhrav ddhyspdres hyvtlprsry tqssdhhyrd
     1021 vrnceaadrq pyqrsrsteq rpvlertnsr srsterpdsn lirsmpslmt grsappspal
     1081 prshprtgsv qtspsstpvv grrgrqlpql ppkgtlerka ggkklrstvq rstetglave
     1141 mrnwmtrqas restdgsmns yssegnlifp gvrlaadsqf sdfldglgpa qlvgrqtlat
     1201 psmgdiqvgm mdkkgqleve iirarglvvk pgsktlpapy vkvyllengv ciakkktkva
     1261 rktleplyqq llsfeespqg kvlqiivwgd ygrmdhksfm gvaqilldel dlsnmvigwf
     1321 klfppsslvd ptlapltrra sqsslesstg psyars
//
LOCUS       XP_041326573            1356 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X16
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326573
VERSION     XP_041326573.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470639.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1356
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X16"
                     /calculated_mol_wt=153543
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1187..1332
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1244,1248..1249,1251,1254,1282,1284,1286,1330..1331)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1356
                     /gene="RIMS2"
                     /coded_by="XM_041470639.1:1..4071"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdreshyv tlprsrytqs sdhhyrdvrn ceaadrqpyq
      841 rsrsteqrpv lertnsrsrs terpdsnlir smpslmtgrs appspalprs hprtgsvqts
      901 psstpvvgrr grqlpqlppk gtlernngdk eiesyeeaes srrtnsgald veernrqmkm
      961 skykqvagsd srleqdyhsk yrsgrdphrg sdnvsnkssd sdvsdvsavs rtssasrfss
     1021 tsymsvqser prgnkkisvf tskmqsrqma isgknmtkst sisgemytle kndgsqsdta
     1081 vgtvgggskk rrssigakmv aivglsrksr stsqlsqtea ggkklrstvq rstetglave
     1141 mrnwmtrqas restdgsmns yssegnlifp gvrlaadsqf sdfldglgpa qlvgrqtlat
     1201 psmgdiqvgm mdkkgqleve iirarglvvk pgsktlpapy vkvyllengv ciakkktkva
     1261 rktleplyqq llsfeespqg kvlqiivwgd ygrmdhksfm gvaqilldel dlsnmvigwf
     1321 klfppsslvd ptlapltrra sqsslesstg psyars
//
LOCUS       XP_041326574            1346 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X17
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326574
VERSION     XP_041326574.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470640.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1346
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X17"
                     /calculated_mol_wt=152684
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          <31..416
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          573..672
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(597..603,618,621,651,655,658..659)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          743..866
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(771,777,832,834,842)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1177..1322
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1234,1238..1239,1241,1244,1272,1274,1276,1320..1321)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1346
                     /gene="RIMS2"
                     /coded_by="XM_041470640.1:162..4202"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 mdynwldhts whsseaspms lhpvtwqpsk dgdrligril lnkrlkdgsv prdsgamlgl
      601 kvvggkmtes grlcafitkv kkgsladtvg hlrpgdevle wngrilqgat feevyniile
      661 skpepqvelv vsrpigdipr ipdsthaqle sssssfesqk mdrpsisvts pmspgmlrdv
      721 pqflsgqlss qslsrrttpf vprvqiklwy dkvghqlivt ilgakdlpsr edgrprnpyv
      781 kiyflpdrsd knkrrtktvk ktlepkwnqt fiyspvhrre frermleitl wdqarvreee
      841 seflgeilie letallddep hwyklqthdv sslplphpsp ylprrqlhge sptrrlqrsk
      901 risdsevsdy dcddgigvvs dyrhngrdlq sstlsvpeqv mssnhcsrsg sphrgdsigr
      961 trswspsvpp pqsrnvdqgl rgtrstaahy ntlsrmdrhr avddhyspdr ernceaadrq
     1021 pyqrsrsteq rpvlertnsr srsterpdsn lirsmpslmt grsappspal prshprtgsv
     1081 qtspsstpvv grrgrqlpql ppkgtlerka ggkklrstvq rstetglave mrnwmtrqas
     1141 restdgsmns yssegnlifp gvrlaadsqf sdfldglgpa qlvgrqtlat psmgdiqvgm
     1201 mdkkgqleve iirarglvvk pgsktlpapy vkvyllengv ciakkktkva rktleplyqq
     1261 llsfeespqg kvlqiivwgd ygrmdhksfm gvaqilldel dlsnmvigwf klfppsslvd
     1321 ptlapltrra sqsslesstg psyars
//
LOCUS       XP_041326575            1345 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X18
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326575
VERSION     XP_041326575.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470641.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1345
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X18"
                     /calculated_mol_wt=152595
     Region          28..156
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          577..676
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(601..607,622,625,655,659,662..663)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          728..854
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(759,765,820,822,830)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1176..1321
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1233,1237..1238,1240,1243,1271,1273,1275,1319..1320)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1345
                     /gene="RIMS2"
                     /coded_by="XM_041470641.1:162..4199"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkedk vvmwvcnlcr kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe
      181 kkaklqehpq yqgpsgdist qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi
      241 sreqsrrydq rderdeysqy atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr
      301 srrrskeypv eeedaqsree yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev
      361 srarherrhs dvslantele dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq
      421 gpspnrqrtt nhspptprrs piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr
      481 ndslssdqse svrppppkph ktkkggkmrq vslssseeel astpeytscd dveiesesvs
      541 ekgdmdynwl dhtswhssea spmslhpvtw qpskdgdrli grillnkrlk dgsvprdsga
      601 mlglkvvggk mtesgrlcaf itkvkkgsla dtvghlrpgd evlewngril qgatfeevyn
      661 iileskpepq velvvsrpig dipripdsth aqlesssssf esqkmdrpsi svtspmspgm
      721 lrdvpqflsg qlsiklwydk vghqlivtil gakdlpsred grprnpyvki yflpdrsdkn
      781 krrtktvkkt lepkwnqtfi yspvhrrefr ermleitlwd qarvreeese flgeiliele
      841 tallddephw yklqthdvss lplphpspyl prrqlhgesp trrlqrskri sdsevsdydc
      901 ddgigvvsdy rhngrdlqss tlsvpeqvms snhcsrsgsp hrgdsigrtr swspsvpppq
      961 srnvdqglrg trstaahynt lsrmdrhrav ddhyspdrer nceaadrqpy qrsrsteqrp
     1021 vlertnsrsr sterpdsnli rsmpslmtgr sappspalpr shprtgsvqt spsstpvvgr
     1081 rgrqlpqlpp kgtlernngd keiesyeeag gkklrstvqr stetglavem rnwmtrqasr
     1141 estdgsmnsy ssegnlifpg vrlaadsqfs dfldglgpaq lvgrqtlatp smgdiqvgmm
     1201 dkkgqlevei irarglvvkp gsktlpapyv kvyllengvc iakkktkvar ktleplyqql
     1261 lsfeespqgk vlqiivwgdy grmdhksfmg vaqilldeld lsnmvigwfk lfppsslvdp
     1321 tlapltrras qsslesstgp syars
//
LOCUS       XP_041326576            1330 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X19
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326576
VERSION     XP_041326576.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470642.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1330
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1330
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X19"
                     /calculated_mol_wt=150843
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          <31..416
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          573..672
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(597..603,618,621,651,655,658..659)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          724..850
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(755,761,816,818,826)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1161..1306
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1218,1222..1223,1225,1228,1256,1258,1260,1304..1305)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1330
                     /gene="RIMS2"
                     /coded_by="XM_041470642.1:162..4154"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 mdynwldhts whsseaspms lhpvtwqpsk dgdrligril lnkrlkdgsv prdsgamlgl
      601 kvvggkmtes grlcafitkv kkgsladtvg hlrpgdevle wngrilqgat feevyniile
      661 skpepqvelv vsrpigdipr ipdsthaqle sssssfesqk mdrpsisvts pmspgmlrdv
      721 pqflsgqlsi klwydkvghq livtilgakd lpsredgrpr npyvkiyflp drsdknkrrt
      781 ktvkktlepk wnqtfiyspv hrrefrerml eitlwdqarv reeeseflge ilieletall
      841 ddephwyklq thdvsslplp hpspylprrq lhgesptrrl qrskrisdse vsdydcddgi
      901 gvvsdyrhng rdlqsstlsv peqvmssnhc srsgsphrgd sigrtrswsp svpppqsrnv
      961 dqglrgtrst aahyntlsrm drhravddhy spdrerncea adrqpyqrsr steqrpvler
     1021 tnsrsrster pdsnlirsmp slmtgrsapp spalprshpr tgsvqtspss tpvvgrrgrq
     1081 lpqlppkgtl erkaggkklr stvqrstetg lavemrnwmt rqasrestdg smnsyssegn
     1141 lifpgvrlaa dsqfsdfldg lgpaqlvgrq tlatpsmgdi qvgmmdkkgq leveiirarg
     1201 lvvkpgsktl papyvkvyll engvciakkk tkvarktlep lyqqllsfee spqgkvlqii
     1261 vwgdygrmdh ksfmgvaqil ldeldlsnmv igwfklfpps slvdptlapl trrasqssle
     1321 sstgpsyars
//
LOCUS       XP_041326577            1334 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X20
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326577
VERSION     XP_041326577.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470643.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1334
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X20"
                     /calculated_mol_wt=151314
     Region          28..156
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          577..676
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(601..607,622,625,655,659,662..663)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          728..854
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(759,765,820,822,830)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1165..1310
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1222,1226..1227,1229,1232,1260,1262,1264,1308..1309)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1334
                     /gene="RIMS2"
                     /coded_by="XM_041470643.1:162..4166"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkedk vvmwvcnlcr kqqeiltksg awfynsgsha pqqpdqegsr alrneeapqe
      181 kkaklqehpq yqgpsgdist qaldknrsqg ltrqdsikng stvkhpvtsd tsdrkrspsi
      241 sreqsrrydq rderdeysqy atsdsamprs psdysdrrsq rgpqlyeepe lgdyrdsnrr
      301 srrrskeypv eeedaqsree yerqrreeey qaryrsdpnl arypvkpqpy eeqmrihaev
      361 srarherrhs dvslantele dsrmsmlrme rpsrqrsvse rraamenqrs ysmertreaq
      421 gpspnrqrtt nhspptprrs piplerpdmr rsdslrkqhh ldpssavrkt krekmetmlr
      481 ndslssdqse svrppppkph ktkkggkmrq vslssseeel astpeytscd dveiesesvs
      541 ekgdmdynwl dhtswhssea spmslhpvtw qpskdgdrli grillnkrlk dgsvprdsga
      601 mlglkvvggk mtesgrlcaf itkvkkgsla dtvghlrpgd evlewngril qgatfeevyn
      661 iileskpepq velvvsrpig dipripdsth aqlesssssf esqkmdrpsi svtspmspgm
      721 lrdvpqflsg qlsiklwydk vghqlivtil gakdlpsred grprnpyvki yflpdrsdkn
      781 krrtktvkkt lepkwnqtfi yspvhrrefr ermleitlwd qarvreeese flgeiliele
      841 tallddephw yklqthdvss lplphpspyl prrqlhgesp trrlqrskri sdsevsdydc
      901 ddgigvvsdy rhngrdlqss tlsvpeqvms snhcsrsgsp hrgdsigrtr swspsvpppq
      961 srnvdqglrg trstaahynt lsrmdrhrav ddhyspdrer nceaadrqpy qrsrsteqrp
     1021 vlertnsrsr sterpdsnli rsmpslmtgr sappspalpr shprtgsvqt spsstpvvgr
     1081 rgrqlpqlpp kgtlerkagg kklrstvqrs tetglavemr nwmtrqasre stdgsmnsys
     1141 segnlifpgv rlaadsqfsd fldglgpaql vgrqtlatps mgdiqvgmmd kkgqleveii
     1201 rarglvvkpg sktlpapyvk vyllengvci akkktkvark tleplyqqll sfeespqgkv
     1261 lqiivwgdyg rmdhksfmgv aqilldeldl snmvigwfkl fppsslvdpt lapltrrasq
     1321 sslesstgps yars
//
LOCUS       XP_041326578            1324 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X21
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326578
VERSION     XP_041326578.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470644.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1324
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X21"
                     /calculated_mol_wt=149705
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1155..1300
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1212,1216..1217,1219,1222,1250,1252,1254,1298..1299)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1324
                     /gene="RIMS2"
                     /coded_by="XM_041470644.1:1..3975"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdrernce aadrqpyqrs rsteqrpvle rtnsrsrste
      841 rpdsnlirsm pslmtgrsap pspalprshp rtgsvqtsps stpvvgrrgr qlpqlppkgt
      901 lerkeaessr rtnsgaldve ernrqmkmsk ykqvagsdsr leqdyhskyr sgrdphrgsd
      961 nvsnkssdsd vsdvsavsrt ssasrfssts ymsvqserpr gnkkisvfts kmqsrqmais
     1021 gknmtkstsi sgemytlekn dgsqsdtavg tvgggskkrr ssigakmvai vglsrksrst
     1081 sqlsqteagg kklrstvqrs tetglavemr nwmtrqasre stdgsmnsys segnlifpgv
     1141 rlaadsqfsd fldglgpaql vgrqtlatps mgdiqvgmmd kkgqleveii rarglvvkpg
     1201 sktlpapyvk vyllengvci akkktkvark tleplyqqll sfeespqgkv lqiivwgdyg
     1261 rmdhksfmgv aqilldeldl snmvigwfkl fppsslvdpt lapltrrasq sslesstgps
     1321 yars
//
LOCUS       XP_041326579            1324 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X22
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326579
VERSION     XP_041326579.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470645.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1324
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1324
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X22"
                     /calculated_mol_wt=149738
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1155..1300
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1212,1216..1217,1219,1222,1250,1252,1254,1298..1299)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1324
                     /gene="RIMS2"
                     /coded_by="XM_041470645.1:1..3975"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdrernce aadrqpyqrs rsteqrpvle rtnsrsrste
      841 rpdsnlirsm pslmtgrsap pspalprshp rtgsvqtsps stpvvgrrgr qlpqlppkgt
      901 lernngdkei esyegaldve ernrqmkmsk ykqvagsdsr leqdyhskyr sgrdphrgsd
      961 nvsnkssdsd vsdvsavsrt ssasrfssts ymsvqserpr gnkkisvfts kmqsrqmais
     1021 gknmtkstsi sgemytlekn dgsqsdtavg tvgggskkrr ssigakmvai vglsrksrst
     1081 sqlsqteagg kklrstvqrs tetglavemr nwmtrqasre stdgsmnsys segnlifpgv
     1141 rlaadsqfsd fldglgpaql vgrqtlatps mgdiqvgmmd kkgqleveii rarglvvkpg
     1201 sktlpapyvk vyllengvci akkktkvark tleplyqqll sfeespqgkv lqiivwgdyg
     1261 rmdhksfmgv aqilldeldl snmvigwfkl fppsslvdpt lapltrrasq sslesstgps
     1321 yars
//
LOCUS       XP_041326580            1328 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X23
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326580
VERSION     XP_041326580.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470646.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1328
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1328
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X23"
                     /calculated_mol_wt=150474
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          620..719
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(644..650,665,668,698,702,705..706)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          771..897
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(802,808,863,865,873)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <902..>1073
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1159..1304
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1216,1220..1221,1223,1226,1254,1256,1258,1302..1303)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1328
                     /gene="RIMS2"
                     /coded_by="XM_041470646.1:162..4148"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 sqrgkrktse qavlsdsntl serqkkmvcf gghsleedle wsepqikdsg vdtcssttln
      601 eehshsekhp vtwqpskdgd rligrillnk rlkdgsvprd sgamlglkvv ggkmtesgrl
      661 cafitkvkkg sladtvghlr pgdevlewng rilqgatfee vyniileskp epqvelvvsr
      721 pigdipripd sthaqlesss ssfesqkmdr psisvtspms pgmlrdvpqf lsgqlsiklw
      781 ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs dknkrrtktv kktlepkwnq
      841 tfiyspvhrr efrermleit lwdqarvree eseflgeili eletalldde phwyklqthd
      901 vsslplphps pylprrqlhg esptrrlqrs krisdsevsd ydcddgigvv sdyrhngrdl
      961 qsstlsvpeq vmssnhcsrs gsphrgdsig rtrswspsvp ppqsrnvdqg lrgtrstaah
     1021 yntlsrmdrh ravddhyspd rershprtgs vqtspsstpv vgrrgrqlpq lppkgtlern
     1081 ngdkeiesye eaggkklrst vqrstetgla vemrnwmtrq asrestdgsm nsyssegnli
     1141 fpgvrlaads qfsdfldglg paqlvgrqtl atpsmgdiqv gmmdkkgqle veiirarglv
     1201 vkpgsktlpa pyvkvyllen gvciakkktk varktleply qqllsfeesp qgkvlqiivw
     1261 gdygrmdhks fmgvaqilld eldlsnmvig wfklfppssl vdptlapltr rasqssless
     1321 tgpsyars
//
LOCUS       XP_041326582            1270 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X24
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326582
VERSION     XP_041326582.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470648.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1270
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1270
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X24"
                     /calculated_mol_wt=144064
     Region          28..152
                     /region_name="PHD_SF"
                     /note="PHD finger superfamily; cl22851"
                     /db_xref="CDD:473978"
     Region          <31..416
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          573..672
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(597..603,618,621,651,655,658..659)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          724..850
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(755,761,816,818,826)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <855..>1026
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1101..1246
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1158,1162..1163,1165,1168,1196,1198,1200,1244..1245)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1270
                     /gene="RIMS2"
                     /coded_by="XM_041470648.1:162..3974"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 msapagprsg paapqpppap qpempdlshl teeerkiila vmdrqkkeee keqsvlkklh
       61 qqfemykeqv kkmgeesqqh qeqkgdaptc gichktkfad gcghncsycq tkfcarcggr
      121 vslrsnkvmw vcnlcrkqqe iltksgawfy nsgshapqqp dqegsralrn eeapqekkak
      181 lqehpqyqgp sgdistqald knrsqgltrq dsikngstvk hpvtsdtsdr krspsisreq
      241 srrydqrder deysqyatsd samprspsdy sdrrsqrgpq lyeepelgdy rdsnrrsrrr
      301 skeypveeed aqsreeyerq rreeeyqary rsdpnlaryp vkpqpyeeqm rihaevsrar
      361 herrhsdvsl anteledsrm smlrmerpsr qrsvserraa menqrsysme rtreaqgpsp
      421 nrqrttnhsp ptprrspipl erpdmrrsds lrkqhhldps savrktkrek metmlrndsl
      481 ssdqsesvrp pppkphktkk ggkmrqvsls sseeelastp eytscddvei esesvsekgd
      541 mdynwldhts whsseaspms lhpvtwqpsk dgdrligril lnkrlkdgsv prdsgamlgl
      601 kvvggkmtes grlcafitkv kkgsladtvg hlrpgdevle wngrilqgat feevyniile
      661 skpepqvelv vsrpigdipr ipdsthaqle sssssfesqk mdrpsisvts pmspgmlrdv
      721 pqflsgqlsi klwydkvghq livtilgakd lpsredgrpr npyvkiyflp drsdknkrrt
      781 ktvkktlepk wnqtfiyspv hrrefrerml eitlwdqarv reeeseflge ilieletall
      841 ddephwyklq thdvsslplp hpspylprrq lhgesptrrl qrskrisdse vsdydcddgi
      901 gvvsdyrhng rdlqsstlsv peqvmssnhc srsgsphrgd sigrtrswsp svpppqsrnv
      961 dqglrgtrst aahyntlsrm drhravddhy spdrershpr tgsvqtspss tpvvgrrgrq
     1021 lpqlppkgtl erkaggkklr stvqrstetg lavemrnwmt rqasrestdg smnsyssegn
     1081 lifpgvrlaa dsqfsdfldg lgpaqlvgrq tlatpsmgdi qvgmmdkkgq leveiirarg
     1141 lvvkpgsktl papyvkvyll engvciakkk tkvarktlep lyqqllsfee spqgkvlqii
     1201 vwgdygrmdh ksfmgvaqil ldeldlsnmv igwfklfpps slvdptlapl trrasqssle
     1261 sstgpsyars
//
LOCUS       XP_041326583            1275 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X25
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326583
VERSION     XP_041326583.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470649.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1275
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X25"
                     /calculated_mol_wt=144207
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <666..>837
                     /region_name="PHA03307"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:223039"
     Region          1106..1251
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1163,1167..1168,1170,1173,1201,1203,1205,1249..1250)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1275
                     /gene="RIMS2"
                     /coded_by="XM_041470649.1:1..3828"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdrershp rtgsvqtsps stpvvgrrgr qlpqlppkgt
      841 lernngdkei esyeeeaess rrtnsgaldv eernrqmkms kykqvagsds rleqdyhsky
      901 rsgrdphrgs dnvsnkssds dvsdvsavsr tssasrfsst symsvqserp rgnkkisvft
      961 skmqsrqmai sgknmtksts isgemytlek ndgsqsdtav gtvgggskkr rssigakmva
     1021 ivglsrksrs tsqlsqteag gkklrstvqr stetglavem rnwmtrqasr estdgsmnsy
     1081 ssegnlifpg vrlaadsqfs dfldglgpaq lvgrqtlatp smgdiqvgmm dkkgqlevei
     1141 irarglvvkp gsktlpapyv kvyllengvc iakkktkvar ktleplyqql lsfeespqgk
     1201 vlqiivwgdy grmdhksfmg vaqilldeld lsnmvigwfk lfppsslvdp tlapltrras
     1261 qsslesstgp syars
//
LOCUS       XP_041326584            1210 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X26
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326584
VERSION     XP_041326584.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470650.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1210
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X26"
                     /calculated_mol_wt=137609
     Region          431..530
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(455..461,476,479,509,513,516..517)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          582..708
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(613,619,674,676,684)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <784..985
                     /region_name="PHA03309"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:165564"
     Region          1041..1186
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1098,1102..1103,1105,1108,1136,1138,1140,1184..1185)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1210
                     /gene="RIMS2"
                     /coded_by="XM_041470650.1:1..3633"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dsqrgkrkts
      361 eqavlsdsnt lserqkkmvc fgghsleedl ewsepqikds gvdtcssttl neehshsekh
      421 pvtwqpskdg drligrilln krlkdgsvpr dsgamlglkv vggkmtesgr lcafitkvkk
      481 gsladtvghl rpgdevlewn grilqgatfe evyniilesk pepqvelvvs rpigdiprip
      541 dsthaqless sssfesqkmd rpsisvtspm spgmlrdvpq flsgqlsikl wydkvghqli
      601 vtilgakdlp sredgrprnp yvkiyflpdr sdknkrrtkt vkktlepkwn qtfiyspvhr
      661 refrermlei tlwdqarvre eeseflgeil ieletalldd ephwyklqth dvsslplphp
      721 spylprrqlh gesptrrlqr skrisdsevs dydcddgigv vsdyrhngrd lqsstlsvpe
      781 qvmssnhcsr sgsphrgdsi grtrswspsv pppqsrnvdq glrgtrstaa hyntlsrmdr
      841 hravddhysp dreshyvtlp rsrytqssdh hyrdvrncea adrqpyqrsr steqrpvler
      901 tnsrsrster pdsnlirsmp slmtgrsapp spalprshpr tgsvqtspss tpvvgrrgrq
      961 lpqlppkgtl erkaggkklr stvqrstetg lavemrnwmt rqasrestdg smnsyssegn
     1021 lifpgvrlaa dsqfsdfldg lgpaqlvgrq tlatpsmgdi qvgmmdkkgq leveiirarg
     1081 lvvkpgsktl papyvkvyll engvciakkk tkvarktlep lyqqllsfee spqgkvlqii
     1141 vwgdygrmdh ksfmgvaqil ldeldlsnmv igwfklfpps slvdptlapl trrasqssle
     1201 sstgpsyars
//
LOCUS       XP_041326585            1188 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X27
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326585
VERSION     XP_041326585.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470651.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1188
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1188
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X27"
                     /calculated_mol_wt=134922
     Region          431..530
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(455..461,476,479,509,513,516..517)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          582..708
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(613,619,674,676,684)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1019..1164
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1076,1080..1081,1083,1086,1114,1116,1118,1162..1163)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1188
                     /gene="RIMS2"
                     /coded_by="XM_041470651.1:1..3567"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dsqrgkrkts
      361 eqavlsdsnt lserqkkmvc fgghsleedl ewsepqikds gvdtcssttl neehshsekh
      421 pvtwqpskdg drligrilln krlkdgsvpr dsgamlglkv vggkmtesgr lcafitkvkk
      481 gsladtvghl rpgdevlewn grilqgatfe evyniilesk pepqvelvvs rpigdiprip
      541 dsthaqless sssfesqkmd rpsisvtspm spgmlrdvpq flsgqlsikl wydkvghqli
      601 vtilgakdlp sredgrprnp yvkiyflpdr sdknkrrtkt vkktlepkwn qtfiyspvhr
      661 refrermlei tlwdqarvre eeseflgeil ieletalldd ephwyklqth dvsslplphp
      721 spylprrqlh gesptrrlqr skrisdsevs dydcddgigv vsdyrhngrd lqsstlsvpe
      781 qvmssnhcsr sgsphrgdsi grtrswspsv pppqsrnvdq glrgtrstaa hyntlsrmdr
      841 hravddhysp drernceaad rqpyqrsrst eqrpvlertn srsrsterpd snlirsmpsl
      901 mtgrsappsp alprshprtg svqtspsstp vvgrrgrqlp qlppkgtler kaggkklrst
      961 vqrstetgla vemrnwmtrq asrestdgsm nsyssegnli fpgvrlaads qfsdfldglg
     1021 paqlvgrqtl atpsmgdiqv gmmdkkgqle veiirarglv vkpgsktlpa pyvkvyllen
     1081 gvciakkktk varktleply qqllsfeesp qgkvlqiivw gdygrmdhks fmgvaqilld
     1141 eldlsnmvig wfklfppssl vdptlapltr rasqssless tgpsyars
//
LOCUS       XP_041326586            1185 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X28
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326586
VERSION     XP_041326586.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470652.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1185
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X28"
                     /calculated_mol_wt=135006
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          1016..1161
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1073,1077..1078,1080,1083,1111,1113,1115,1159..1160)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1185
                     /gene="RIMS2"
                     /coded_by="XM_041470652.1:1..3558"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdreshyv tlprsrytqs sdhhyrdvrn ceaadrqpyq
      841 rsrsteqrpv lertnsrsrs terpdsnlir smpslmtgrs appspalprs hprtgsvqts
      901 psstpvvgrr grqlpqlppk gtlernngdk eiesyeeeae ssrrtnseag gkklrstvqr
      961 stetglavem rnwmtrqasr estdgsmnsy ssegnlifpg vrlaadsqfs dfldglgpaq
     1021 lvgrqtlatp smgdiqvgmm dkkgqlevei irarglvvkp gsktlpapyv kvyllengvc
     1081 iakkktkvar ktleplyqql lsfeespqgk vlqiivwgdy grmdhksfmg vaqilldeld
     1141 lsnmvigwfk lfppsslvdp tlapltrras qsslesstgp syars
//
LOCUS       XP_041326587            1163 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X29
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326587
VERSION     XP_041326587.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470653.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1163
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X29"
                     /calculated_mol_wt=132479
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          <737..938
                     /region_name="PHA03309"
                     /note="transcriptional regulator ICP4; Provisional"
                     /db_xref="CDD:165564"
     Region          994..1139
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1051,1055..1056,1058,1061,1089,1091,1093,1137..1138)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1163
                     /gene="RIMS2"
                     /coded_by="XM_041470653.1:1..3492"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdreshyv tlprsrytqs sdhhyrdvrn ceaadrqpyq
      841 rsrsteqrpv lertnsrsrs terpdsnlir smpslmtgrs appspalprs hprtgsvqts
      901 psstpvvgrr grqlpqlppk gtlerkaggk klrstvqrst etglavemrn wmtrqasres
      961 tdgsmnsyss egnlifpgvr laadsqfsdf ldglgpaqlv grqtlatpsm gdiqvgmmdk
     1021 kgqleveiir arglvvkpgs ktlpapyvkv yllengvcia kkktkvarkt leplyqqlls
     1081 feespqgkvl qiivwgdygr mdhksfmgva qilldeldls nmvigwfklf ppsslvdptl
     1141 apltrrasqs slesstgpsy ars
//
LOCUS       XP_041326588            1152 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X30
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326588
VERSION     XP_041326588.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470654.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1152
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1152
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X30"
                     /calculated_mol_wt=131072
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          983..1128
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1040,1044..1045,1047,1050,1078,1080,1082,1126..1127)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1152
                     /gene="RIMS2"
                     /coded_by="XM_041470654.1:1..3459"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdrernce aadrqpyqrs rsteqrpvle rtnsrsrste
      841 rpdsnlirsm pslmtgrsap pspalprshp rtgsvqtsps stpvvgrrgr qlpqlppkgt
      901 lernngdkei esyeeaggkk lrstvqrste tglavemrnw mtrqasrest dgsmnsysse
      961 gnlifpgvrl aadsqfsdfl dglgpaqlvg rqtlatpsmg diqvgmmdkk gqleveiira
     1021 rglvvkpgsk tlpapyvkvy llengvciak kktkvarktl eplyqqllsf eespqgkvlq
     1081 iivwgdygrm dhksfmgvaq illdeldlsn mvigwfklfp psslvdptla pltrrasqss
     1141 lesstgpsya rs
//
LOCUS       XP_041326589            1157 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X31
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326589
VERSION     XP_041326589.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470655.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1157
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X31"
                     /calculated_mol_wt=131633
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          554..677
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(582,588,643,645,653)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          988..1133
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1045,1049..1050,1052,1055,1083,1085,1087,1131..1132)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1157
                     /gene="RIMS2"
                     /coded_by="XM_041470655.1:1..3474"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 sqslsrrttp fvprvqiklw ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs
      601 dknkrrtktv kktlepkwnq tfiyspvhrr efrermleit lwdqarvree eseflgeili
      661 eletalldde phwyklqthd vsslplphps pylprrqlhg esptrrlqrs krisdsevsd
      721 ydcddgigvv sdyrhngrdl qsstlsvpeq vmssnhcsrs gsphrgdsig rtrswspsvp
      781 ppqsrnvdqg lrgtrstaah yntlsrmdrh ravddhyspd rernceaadr qpyqrsrste
      841 qrpvlertns rsrsterpds nlirsmpslm tgrsappspa lprshprtgs vqtspsstpv
      901 vgrrgrqlpq lppkgtlerk aggkklrstv qrstetglav emrnwmtrqa srestdgsmn
      961 syssegnlif pgvrlaadsq fsdfldglgp aqlvgrqtla tpsmgdiqvg mmdkkgqlev
     1021 eiirarglvv kpgsktlpap yvkvylleng vciakkktkv arktleplyq qllsfeespq
     1081 gkvlqiivwg dygrmdhksf mgvaqillde ldlsnmvigw fklfppsslv dptlapltrr
     1141 asqsslesst gpsyars
//
LOCUS       XP_041326590            1141 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X32
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326590
VERSION     XP_041326590.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470656.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1141
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X32"
                     /calculated_mol_wt=129792
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          972..1117
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(1029,1033..1034,1036,1039,1067,1069,1071,1115..1116)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1141
                     /gene="RIMS2"
                     /coded_by="XM_041470656.1:1..3426"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdrernce aadrqpyqrs rsteqrpvle rtnsrsrste
      841 rpdsnlirsm pslmtgrsap pspalprshp rtgsvqtsps stpvvgrrgr qlpqlppkgt
      901 lerkaggkkl rstvqrstet glavemrnwm trqasrestd gsmnsysseg nlifpgvrla
      961 adsqfsdfld glgpaqlvgr qtlatpsmgd iqvgmmdkkg qleveiirar glvvkpgskt
     1021 lpapyvkvyl lengvciakk ktkvarktle plyqqllsfe espqgkvlqi ivwgdygrmd
     1081 hksfmgvaqi lldeldlsnm vigwfklfpp sslvdptlap ltrrasqssl esstgpsyar
     1141 s
//
LOCUS       XP_041326591            1103 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X33
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326591
VERSION     XP_041326591.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470657.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1103
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1103
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X33"
                     /calculated_mol_wt=125700
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          934..1079
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(991,995..996,998,1001,1029,1031,1033,1077..1078)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1103
                     /gene="RIMS2"
                     /coded_by="XM_041470657.1:1..3312"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdreshyv tlprsrytqs sdhhyrdvrs hprtgsvqts
      841 psstpvvgrr grqlpqlppk gtlerkaggk klrstvqrst etglavemrn wmtrqasres
      901 tdgsmnsyss egnlifpgvr laadsqfsdf ldglgpaqlv grqtlatpsm gdiqvgmmdk
      961 kgqleveiir arglvvkpgs ktlpapyvkv yllengvcia kkktkvarkt leplyqqlls
     1021 feespqgkvl qiivwgdygr mdhksfmgva qilldeldls nmvigwfklf ppsslvdptl
     1081 apltrrasqs slesstgpsy ars
//
LOCUS       XP_041326592            1108 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X34
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326592
VERSION     XP_041326592.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470658.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1108
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X34"
                     /calculated_mol_wt=126135
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          554..677
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(582,588,643,645,653)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          939..1084
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(996,1000..1001,1003,1006,1034,1036,1038,1082..1083)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1108
                     /gene="RIMS2"
                     /coded_by="XM_041470658.1:1..3327"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 sqslsrrttp fvprvqiklw ydkvghqliv tilgakdlps redgrprnpy vkiyflpdrs
      601 dknkrrtktv kktlepkwnq tfiyspvhrr efrermleit lwdqarvree eseflgeili
      661 eletalldde phwyklqthd vsslplphps pylprrqlhg esptrrlqrs krisdsevsd
      721 ydcddgigvv sdyrhngrdl qsstlsvpeq vmssnhcsrs gsphrgdsig rtrswspsvp
      781 ppqsrnvdqg lrgtrstaah yntlsrmdrh ravddhyspd rershprtgs vqtspsstpv
      841 vgrrgrqlpq lppkgtlern ngdkeiesye eaggkklrst vqrstetgla vemrnwmtrq
      901 asrestdgsm nsyssegnli fpgvrlaads qfsdfldglg paqlvgrqtl atpsmgdiqv
      961 gmmdkkgqle veiirarglv vkpgsktlpa pyvkvyllen gvciakkktk varktleply
     1021 qqllsfeesp qgkvlqiivw gdygrmdhks fmgvaqilld eldlsnmvig wfklfppssl
     1081 vdptlapltr rasqssless tgpsyars
//
LOCUS       XP_041326593            1081 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X35
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326593
VERSION     XP_041326593.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470659.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1081
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X35"
                     /calculated_mol_wt=123013
     Region          384..483
                     /region_name="PDZ_RIM-like"
                     /note="PDZ domain of Rab3-interacting molecule 1 (RIM),
                     RIM2, piccolo and related domains; cd06714"
                     /db_xref="CDD:467198"
     Site            order(408..414,429,432,462,466,469..470)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467198"
     Region          535..661
                     /region_name="C2A_RIM1alpha"
                     /note="C2 domain first repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04031"
                     /db_xref="CDD:175997"
     Site            order(566,572,627,629,637)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:175997"
     Region          912..1057
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(969,973..974,976,979,1007,1009,1011,1055..1056)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..1081
                     /gene="RIMS2"
                     /coded_by="XM_041470659.1:1..3246"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqfetlrqvc nsvlshfhgv fssppnilqn dlfgqtlnnt rkrspsisre qsrrydqrde
       61 rdeysqyats dsamprspsd ysdrrsqrgp qlyeepelgd yrdsnrrsrr rskeypveee
      121 daqsreeyer qrreeeyqar yrsdpnlary pvkpqpyeeq mrihaevsra rherrhsdvs
      181 lanteledsr msmlrmerps rqrsvserra amenqrsysm ertreaqgps pnrqrttnhs
      241 pptprrspip lerpdmrrsd slrkqhhldp ssavrktkre kmetmlrnds lssdqsesvr
      301 ppppkphktk kggkmrqvsl ssseeelast peytscddve iesesvsekg dmdynwldht
      361 swhsseaspm slhpvtwqps kdgdrligri llnkrlkdgs vprdsgamlg lkvvggkmte
      421 sgrlcafitk vkkgsladtv ghlrpgdevl ewngrilqga tfeevyniil eskpepqvel
      481 vvsrpigdip ripdsthaql esssssfesq kmdrpsisvt spmspgmlrd vpqflsgqls
      541 iklwydkvgh qlivtilgak dlpsredgrp rnpyvkiyfl pdrsdknkrr tktvkktlep
      601 kwnqtfiysp vhrrefrerm leitlwdqar vreeeseflg eilieletal lddephwykl
      661 qthdvsslpl phpspylprr qlhgesptrr lqrskrisds evsdydcddg igvvsdyrhn
      721 grdlqsstls vpeqvmssnh csrsgsphrg dsigrtrsws psvpppqsrn vdqglrgtrs
      781 taahyntlsr mdrhravddh yspdrershp rtgsvqtsps stpvvgrrgr qlpqlppkgt
      841 lerkaggkkl rstvqrstet glavemrnwm trqasrestd gsmnsysseg nlifpgvrla
      901 adsqfsdfld glgpaqlvgr qtlatpsmgd iqvgmmdkkg qleveiirar glvvkpgskt
      961 lpapyvkvyl lengvciakk ktkvarktle plyqqllsfe espqgkvlqi ivwgdygrmd
     1021 hksfmgvaqi lldeldlsnm vigwfklfpp sslvdptlap ltrrasqssl esstgpsyar
     1081 s
//
LOCUS       XP_041326594             281 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X36
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326594
VERSION     XP_041326594.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470660.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..281
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..281
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X36"
                     /calculated_mol_wt=30553
     Region          112..257
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(169,173..174,176,179,207,209,211,255..256)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..281
                     /gene="RIMS2"
                     /coded_by="XM_041470660.1:1..846"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mgrqtaaggr amqrsqsrss lsasfealav yfpcmnslee edgeaggkkl rstvqrstet
       61 glavemrnwm trqasrestd gsmnsysseg nlifpgvrla adsqfsdfld glgpaqlvgr
      121 qtlatpsmgd iqvgmmdkkg qleveiirar glvvkpgskt lpapyvkvyl lengvciakk
      181 ktkvarktle plyqqllsfe espqgkvlqi ivwgdygrmd hksfmgvaqi lldeldlsnm
      241 vigwfklfpp sslvdptlap ltrrasqssl esstgpsyar s
//
LOCUS       XP_041326595             269 aa            linear   VRT 06-MAY-2021
DEFINITION  regulating synaptic membrane exocytosis protein 2 isoform X37
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326595
VERSION     XP_041326595.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470661.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..269
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..269
                     /product="regulating synaptic membrane exocytosis protein
                     2 isoform X37"
                     /calculated_mol_wt=29367
     Region          100..245
                     /region_name="C2B_RIM1alpha"
                     /note="C2 domain second repeat contained in
                     Rab3-interacting molecule (RIM) proteins; cd04028"
                     /db_xref="CDD:175994"
     Site            order(157,161..162,164,167,195,197,199,243..244)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:175994"
     CDS             1..269
                     /gene="RIMS2"
                     /coded_by="XM_041470661.1:1..810"
                     /db_xref="GeneID:121355317"
ORIGIN      
        1 mqrsqsrssl sasfealavy fpcmnsleee dgaggkklrs tvqrstetgl avemrnwmtr
       61 qasrestdgs mnsyssegnl ifpgvrlaad sqfsdfldgl gpaqlvgrqt latpsmgdiq
      121 vgmmdkkgql eveiirargl vvkpgsktlp apyvkvylle ngvciakkkt kvarktlepl
      181 yqqllsfees pqgkvlqiiv wgdygrmdhk sfmgvaqill deldlsnmvi gwfklfppss
      241 lvdptlaplt rrasqssles stgpsyars
//
LOCUS       XP_041326597             450 aa            linear   VRT 06-MAY-2021
DEFINITION  antizyme inhibitor 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326597
VERSION     XP_041326597.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470663.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..450
                     /product="antizyme inhibitor 1 isoform X1"
                     /calculated_mol_wt=49872
     Region          26..421
                     /region_name="PLPDE_III_ODC_like_AZI"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor;
                     cd06831"
                     /db_xref="CDD:143504"
     Site            order(91..93,119,141,288,331,360,362,393,396,399)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143504"
     CDS             1..450
                     /gene="AZIN1"
                     /coded_by="XM_041470663.1:542..1894"
                     /db_xref="GeneID:121355321"
ORIGIN      
        1 mkgfledany siglldegat ladvidnciy ehthtgkkaf yvgdlgklvr nnmqwqnvma
       61 pikpfypvkc nstpgvleil gtlgvgfacs sksemalvqd lgispeniiy tnpckqasqi
      121 kyaakagini mtcdndielk kisrnhpnak lllhiatedi tageemnmkf gttlkncrhl
      181 mecakelgvq ivgvkfhvsg sckdlqtyih alsdarcvfd maeefgfkmn mldigggftg
      241 selqleevnh virplldvyf pkesgvnvia epgcyyvssa ftlavnviak ktveydkllp
      301 sgveqtrndd epvftyyind gvygsfaskl seklntipev hkkykedepl fasslwgpsc
      361 deldqivenc llpelsvgdw lifdnmgsgt lgeqsafndy qrpliyymms fsdwdemqda
      421 giasdtlmkn fffvpsciql speerfstaa
//
LOCUS       XP_041326598             425 aa            linear   VRT 06-MAY-2021
DEFINITION  antizyme inhibitor 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326598
VERSION     XP_041326598.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470664.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..425
                     /product="antizyme inhibitor 1 isoform X2"
                     /calculated_mol_wt=47111
     Region          26..396
                     /region_name="PLPDE_III"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzymes; cl00261"
                     /db_xref="CDD:469695"
     Site            order(67,69,111,154,195,197,246..249)
                     /site_type="other"
                     /note="pyridoxal 5'-phosphate (PLP) binding site [chemical
                     binding]"
                     /db_xref="CDD:143484"
     Site            69
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:143484"
     CDS             1..425
                     /gene="AZIN1"
                     /coded_by="XM_041470664.1:536..1813"
                     /db_xref="GeneID:121355321"
ORIGIN      
        1 mkgfledany siglldegat ladvidnciy ehthtgkkaf yvgdlgklvr nnmqwqnvma
       61 pikpfypvkc nstpgvleil gtlgvgfacs sksemalvqd lgispeniiy tnpckqasqi
      121 kyaakagini mtcdndielk kisrnhpnak lllhiatedi tageemnmkf gttlkncrhl
      181 mecakelgvq ivgvkfhvsg sckdlqtyih alsdarcvfd mavnhvirpl ldvyfpkesg
      241 vnviaepgcy yvssaftlav nviakktvey dkllpsgveq trnddepvft yyindgvygs
      301 fasklsekln tipevhkkyk edeplfassl wgpscdeldq ivencllpel svgdwlifdn
      361 mgsgtlgeqs afndyqrpli yymmsfsdwd emqdagiasd tlmknfffvp sciqlspeer
      421 fstaa
//
LOCUS       XP_041326599             398 aa            linear   VRT 06-MAY-2021
DEFINITION  antizyme inhibitor 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326599
VERSION     XP_041326599.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470665.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..398
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..398
                     /product="antizyme inhibitor 1 isoform X3"
                     /calculated_mol_wt=44159
     Region          2..369
                     /region_name="PLPDE_III_ODC_like_AZI"
                     /note="Type III Pyridoxal 5-phosphate (PLP)-Dependent
                     Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor;
                     cd06831"
                     /db_xref="CDD:143504"
     Site            order(39..41,67,89,236,279,308,310,341,344,347)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:143504"
     CDS             1..398
                     /gene="AZIN1"
                     /coded_by="XM_041470665.1:362..1558"
                     /db_xref="GeneID:121355321"
ORIGIN      
        1 mqwqnvmapi kpfypvkcns tpgvleilgt lgvgfacssk semalvqdlg ispeniiytn
       61 pckqasqiky aakaginimt cdndielkki srnhpnakll lhiatedita geemnmkfgt
      121 tlkncrhlme cakelgvqiv gvkfhvsgsc kdlqtyihal sdarcvfdma eefgfkmnml
      181 digggftgse lqleevnhvi rplldvyfpk esgvnviaep gcyyvssaft lavnviakkt
      241 veydkllpsg veqtrnddep vftyyindgv ygsfasklse klntipevhk kykedeplfa
      301 sslwgpscde ldqivencll pelsvgdwli fdnmgsgtlg eqsafndyqr pliyymmsfs
      361 dwdemqdagi asdtlmknff fvpsciqlsp eerfstaa
//
LOCUS       XP_041326600             397 aa            linear   VRT 06-MAY-2021
DEFINITION  DEP domain-containing mTOR-interacting protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326600
VERSION     XP_041326600.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470666.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..397
                     /product="DEP domain-containing mTOR-interacting protein"
                     /calculated_mol_wt=45256
     Region          24..105
                     /region_name="DEP_1_DEP6"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain 1
                     found in DEP6-like proteins. DEP6 proteins contain two DEP
                     and a PDZ domain. Their function is unknown; cd04442"
                     /db_xref="CDD:239889"
     Region          121..205
                     /region_name="DEP_2_DEP6"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2
                     found in DEP6-like proteins. DEP6 proteins contain two DEP
                     and a PDZ domain. Their function is unknown; cd04441"
                     /db_xref="CDD:239888"
     Region          318..392
                     /region_name="PDZ_DEPTOR-like"
                     /note="PDZ domain of DEP domain-containing
                     mTOR-interacting protein (DEPTOR), and related domains;
                     cd23067"
                     /db_xref="CDD:467280"
     Site            order(327..333,341,344,373,377,380..381)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467280"
     CDS             1..397
                     /gene="DEPTOR"
                     /coded_by="XM_041470666.1:152..1345"
                     /db_xref="GeneID:121355322"
ORIGIN      
        1 meegmssmqq kaaelehmae vlltgeqlrl rlheekvikd rrhhlktypn cfvakelidw
       61 lidhkeasdr etaiklvqkl ldhsiihhvc dehkefkdvk lfyrfrkddg tfpldnevkv
      121 fmrgqrlyek lmssensllq areeegvkye rtfvasefve wlvqegeaat rseaeqlgrr
      181 llehgiiqhv snkhhfmdsn llyqcrmnfr rrrrlmellt eksrlvpesh dspfclrkqn
      241 hdnrkhtsfl svsptkeiki vsavrrssms scgssgyfss sptlsssppv lcnpksvlkr
      301 pvtadellmp gapyvrktft ivgdavgwgf vvrgskpchi qavdpsgpaa aagmkvcqfv
      361 vsvnglnvlh vdyrtvsnli ltgprtivme vmeevea
//
LOCUS       XP_041326601             399 aa            linear   VRT 06-MAY-2021
DEFINITION  DNA excision repair protein ERCC-8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326601
VERSION     XP_041326601.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470667.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..399
                     /product="DNA excision repair protein ERCC-8"
                     /calculated_mol_wt=44094
     Region          40..362
                     /region_name="WD40"
                     /note="WD40 domain, found in a number of eukaryotic
                     proteins that cover a wide variety of functions including
                     adaptor/regulatory modules in signal transduction,
                     pre-mRNA processing and cytoskeleton assembly; typically
                     contains a GH dipeptide 11-24 residues from...; cd00200"
                     /db_xref="CDD:238121"
     Site            order(42,61,65,71..72,97..98,117,121,127..128,140,160,165,
                     171..172,185,203,208,214..215,244..245,263,267,273..274,
                     300,305,320..321,333..334,352,356,362)
                     /site_type="active"
                     /note="structural tetrad [active]"
                     /db_xref="CDD:238121"
     Region          47..97
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          102..138
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          145..183
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          189..227
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          296..332
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          338..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     CDS             1..399
                     /gene="ERCC8"
                     /coded_by="XM_041470667.1:67..1266"
                     /db_xref="GeneID:121355323"
ORIGIN      
        1 mlglmaarqa glddparlrr aertrrvlsl elnkdrdver ihgsginsld iepvegryml
       61 sggsdgvivl ydlenlsrkp sytckalfsv grshpdvhkf svetvqwyph dtgmftsssf
      121 dktlkiwdtn tlqpadifhf egtvyshhms pvatkhclia vgtkspkvql cdlksgsssh
      181 ilqghrqevl avswsprhey vlatgsadgr vklwdvrras gclstldqyn gekskassea
      241 antahngrvn glcytndglh lltigtddrm rlwnsstgen tlvnygkvcn esrkglkfai
      301 scgcnpefaf vpygstiavy tvftgelitm lrghystvnc cvfqphfqel ysgskdcnvl
      361 awipaprepd pddisekspl qqhvnpayed awsssddeg
//
LOCUS       XP_041326602             171 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor
            2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326602
VERSION     XP_041326602.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470668.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..171
                     /product="NADH dehydrogenase [ubiquinone] 1 alpha
                     subcomplex assembly factor 2"
                     /calculated_mol_wt=19584
     Region          21..>89
                     /region_name="NDUFA12"
                     /note="NADH ubiquinone oxidoreductase subunit NDUFA12;
                     pfam05071"
                     /db_xref="CDD:461542"
     CDS             1..171
                     /gene="NDUFAF2"
                     /coded_by="XM_041470668.1:97..612"
                     /db_xref="GeneID:121355324"
ORIGIN      
        1 msrawqalra lrlrfvgpak elvgtdqfgn kyyrvpkyen ragqviperr fveavnheay
       61 qyqigdfpae weawirkkre dpptieeilr nenyreemkq kvkdvsekdk llqakeyeeg
      121 lvaepshtqv kghasapyyg kkepsqdpts tasifqpgaw mppgsgssqn k
//
LOCUS       XP_041326603              74 aa            linear   VRT 06-MAY-2021
DEFINITION  small integral membrane protein 15 [Pyrgilauda ruficollis].
ACCESSION   XP_041326603
VERSION     XP_041326603.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470669.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..74
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..74
                     /product="small integral membrane protein 15"
                     /calculated_mol_wt=8475
     Region          5..71
                     /region_name="UPF0542"
                     /note="Uncharacterized protein family UPF0542; pfam15086"
                     /db_xref="CDD:405727"
     CDS             1..74
                     /gene="SMIM15"
                     /coded_by="XM_041470669.1:216..440"
                     /db_xref="GeneID:121355325"
ORIGIN      
        1 mldikawaey ivewaakdpy gflttvilal tplfvisaal swklakmiea rerelkkkqk
       61 rqeniakakr tkkd
//
LOCUS       XP_041326604            3985 aa            linear   VRT 06-MAY-2021
DEFINITION  cardiomyopathy-associated protein 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326604
VERSION     XP_041326604.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470670.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3985
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3985
                     /product="cardiomyopathy-associated protein 5"
                     /calculated_mol_wt=447604
     Region          <764..>1294
                     /region_name="sbcc"
                     /note="exonuclease SbcC; TIGR00618"
                     /db_xref="CDD:129705"
     Region          <3409..>3533
                     /region_name="46"
                     /note="endonuclease subunit; Provisional; PHA02562"
                     /db_xref="CDD:222878"
     Region          <3603..>3808
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain [General function
                     prediction only]; COG3401"
                     /db_xref="CDD:442628"
     Region          3619..3716
                     /region_name="FN3"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; cd00063"
                     /db_xref="CDD:238020"
     Site            order(3705..3706,3708..3709)
                     /site_type="active"
                     /note="Cytokine receptor motif [active]"
                     /db_xref="CDD:238020"
     Region          3810..3972
                     /region_name="SPRY"
                     /note="SPRY domain; cl02614"
                     /db_xref="CDD:470632"
     CDS             1..3985
                     /gene="CMYA5"
                     /coded_by="XM_041470670.1:99..12056"
                     /db_xref="GeneID:121355326"
ORIGIN      
        1 megsrsaecd rasetssfig deeeeeeeee edeeeeeeee aldteeaeel tnslkdlvqs
       61 edvkpklqyi mtnpsfsmvt cqsedsgitw etsssrcstp wtsetstasd lysmesspvg
      121 sppgkvifim degkiirkrt rkssnrvpma trpkggqcnk krdssgmqrq eprtvlgdvq
      181 astlnveqve aqdtdeemld nkedqeniae epvkrapirs ifresrlrkv gpilggpvqa
      241 riqlfnsifg gtgpapetle knrirrsssa sgdsekflet svkerlqkfg slsthpkhfp
      301 garskiletp serrrkqrqq lteqanqsfs sptsslekql tkknevssen iepykmkest
      361 lqheerkerq ppletpnqvs ghlrkneeea reqqshsatg rtsitestts tplksgkkqv
      421 llpsaenank kpdqslltas dhwdevkkqe vqpnstpqsv sadfvseldr lssqhilpte
      481 sisehperet eksylpdvps aeskystste irqediipqa seaaqseseh vllsysgnet
      541 ekqetecpss talsatsglm ystereegqk tpssetqnvh lenqtnseqd fslqetekqg
      601 iklkppipen kdskyfgisy pvhteseetq ktsainkvdf dhsdfsieen kqaeggqmem
      661 ehpdvsyste etgesettqm etehldfssp meetelkgeq memehpdfsf sreeieepgs
      721 aqletelpdf sfskeetegs esqipdtdyp emlfstkeae ksgrsqlete qpefsskekt
      781 kepesaqvem ehpdfsfsre emeesdsaql eaevssfdks edlsysrekm vesesaqlem
      841 ghpdsaltke vvkemqsaql enehqvllsr eetenkafsh feleqsyspe kqeekeelvq
      901 vhsdlsylme etekensael qlehpdrfds tgraeiqqtg yletafsdlp ypinktkeke
      961 lsqtdkgkqp rpveqdsqfe gklhssamam qeettqlqse hpvwphstrk eqehktsqlk
     1021 vkqpettsst gkaehqklqp nleqtdplys qgetvqgaaq rnlecpessc fiseaeqhen
     1081 vqvvsekrdl sfitgevkqe gvesgtlwsq ltdrakpwet tqmeqeqsfp scstagtqqq
     1141 etpplnvpqp dvswsfgrte qdtvqrevkq qetdqqeavq meteysgise slgkeepqvt
     1201 dqinlaqqei aqpglvhpsl pyspseqmqe emqtepafpe ktfyvstete ketvkhesqq
     1261 qeivhpelek tflpssseke vplememtse ypdlpysshe qetllrnpnl pfhlkqqete
     1321 pvmvehpdvs wdsgeskqvd iveqesghpe lsyamgetqq ksehldsqgs lseaaqdesm
     1381 evesqypnqs csqldykypd spfsfgkgke qstqkfepkh qelpkvgkkr aspataqies
     1441 khpesaswem khpdlshstg etsqevapld qkhrklsfgr ekqqkatmqe leqeklthsp
     1501 nkrdtsehaq egleqpnlsf atdrpddemi spevehtdli spldnteiqr rvqeteqtyv
     1561 fgqmeqktvq peveishlsr sggtaeetem aepgqghsdl pysvfkvggl qtsqlkpehp
     1621 glahslnkvq etiqlglekp galyghdkme qippaeleqg hasleplare vgqqgtehta
     1681 vecskeeqsv sraehsqaak ekqrvpdass lsgkieqrem lkaeqkhpdl lhsidkgkpq
     1741 rttqamlekp dlsswpgtte qeqtageekp gflhyfkkea qgkkaqtele hlglchslse
     1801 aeqetlnaks hhsdlsagrl ehheiiqpea eimdlscsig etqqtqiade dlegldlfhs
     1861 tgtvqqekiq seqektiefs sslkkaekwk dagmqaehpe lqcsmenteg lqnsqansey
     1921 adlsfsvgta eshkttepel keqsllhsfv ktepswaalp etehanvmda tgkvlhtdts
     1981 ssvseekrsa qlevkqerrs ytlhpeeivq lkleqpvfss phgmegqpnt ssvegvfpdf
     2041 lyssgktekq daaqagftpd isystgkseq lqreklnskh pdlsyslgka ethvikpldl
     2101 syscgkadqp rtaqlehpek pyftgetkwr dgvqpeqphv slqssdvetd qpetpsvaht
     2161 fvrseeqgtv qpdfkqsdll sptykaekhe maplragrsq kqdtgppssq spqleseqqn
     2221 tsfsteeads hkiqpysslt eqtvpvplga shivseispe gspksspvig gsppkhldis
     2281 ysscktehse talpepgsfv arkeentesl qylpvaaksk seceilpeae reqtahyfht
     2341 atqleseqin vsysidktes lesqdyltvp sklqsehsvp fysadetcqq evppfskpvs
     2401 eyliptqslt kqenqntqpf vtqpiqsece rvipphneqq lqkiqlsspe taslktvhle
     2461 smsqvqdqdk pesslldtmy lspdqlrsfp kftaeqyeqe mqpdvetvpr svtteskvtg
     2521 aadqqampse sfipfhklpr kselekpvsv altddeekqn iplslsdvad mlgkqsnkvs
     2581 giytegehvh emqqcfedqk httlehlgvv ssdlvhetvt hktqhysgew gglssaeikp
     2641 lsssseekqn pdipsfglas wlveevkars ispvgvaevd tqgiqltpne asdfgskefp
     2701 agscteftvh gttetkghtf rvsesvsnkf sykkssdtgp rtqrydllsl vgdnqgpekl
     2761 lenetstlnp tkieamqhle vgkmsevpeh ylrgeeeeme hassvedsqr aletteqkdl
     2821 fniisegyei lnihapthis svdqeeskhm pdkleyletn psfrrksved gqrpltsgrt
     2881 teisessvlg ktasheliel vkkdddeete etqqenlllp ennncakldp nngtadmdyf
     2941 ekytliddks pikpqferri slspvtedpn esmeeaksfk estevdtlee fslledldev
     3001 fygtikgesk mqsytdvskp lplqrsidss sksitnvede ckspgtplfd seegvlersl
     3061 lfpttvaavn pelleeppal sflykdlyae avgektkdet psdeesgnsn asfpsrnsdt
     3121 ddgtgiyfek yilkdeipsk aigpqkdqip edesfsgevl fwssenkqeq gsgdvqyvkt
     3181 evlservvme rdkfqvdsni qatickpmha ipfgsktils gagtditeer eeenvpvert
     3241 eelpeqssqe ryshqvdyqg aayqeastkq eeqqditafp qmekyvpyvr aptedsvddq
     3301 ftqehlsyvp tiqetenadl ereeqhgdvy edfaesmdyd vitqeellqd eissqfthee
     3361 llfedrdsfd haadsyefvn epeqrtpvel edsgfvvmyp eksatnipqv espqrelkka
     3421 qadtycyhck cpisaidklf gehkdhevtt lddaatkmkd qlsklltale eksmkieefv
     3481 sdielrfnsv eenckknadl lekqneemlk kvvaqydeks enfeevkkmk meylyeqmvn
     3541 fqqtvdsake tlettvketd evdgfvflns skelnkrlls amdttvslek vpsafslfeh
     3601 yadspgqsnq hslqhvavpq tptvipqepn satstsiavy wavndgdtid cfqvycteel
     3661 qasknagalv eeyrvtvkes hciledlepd rcysvwvmav ngtgcslpse kaifktapav
     3721 ptikaedctv cwdtatlrwr aasvsaesfi leycrqhspe geglrsfagi kkpelkvsle
     3781 pnvnyffylr avnpfgtseq seaalistkg trfrllsdta hpalqissna tvihlpektk
     3841 lsgfpsvlge llpaqgchyw eivvsacrsy rigicyeavt qssvlglsdt swcmrccptq
     3901 tsflyrflht gvmsdvhvte hlarigilld ynsgrllffn aerglvlfai rhkftdaahp
     3961 afalekagvl tlctgmelpe fvkqs
//
LOCUS       XP_041326606             700 aa            linear   VRT 06-MAY-2021
DEFINITION  neurolysin, mitochondrial isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326606
VERSION     XP_041326606.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470672.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..700
                     /product="neurolysin, mitochondrial isoform X1"
                     /calculated_mol_wt=80310
     Region          54..692
                     /region_name="M3A_TOP"
                     /note="Peptidase M3 thimet oligopeptidase (TOP), also
                     includes neurolysin; cd06455"
                     /db_xref="CDD:341050"
     Site            order(493..494,497,522,620,625..626,628..629,632)
                     /site_type="active"
                     /db_xref="CDD:341050"
     CDS             1..700
                     /gene="NLN"
                     /coded_by="XM_041470672.1:127..2229"
                     /db_xref="GeneID:121355327"
ORIGIN      
        1 mlslcagaar rsigprlvlr mtlgaeitsq lkassyiasg rnllrwdlsp eeirarteel
       61 lrktkhvyds vgmleieevt hentvralad ieveyavers mldfpqhvsp dkevrlaste
      121 adkklsnfdv emsmredvfq kivylqqtcd lenvkpetkr yleksvqvgr rnglhlpkev
      181 qkeiktmkkk lnelcidfnk nlneentflv fskeeldglp ddfinslekt ekdkykitlk
      241 yphyfpvmkk ccisetrrkm esafnsrcke entkilqqll plrakvaell gynthanfvl
      301 evntakstdn vatflddlsk klkplveeer qfildlkkke ckernfdydg rinawdlhyy
      361 mskteelkys idqerlkeyf pieavtegll niyqkllgle feqiesahvw hdsvtlytvk
      421 dkstgdmlgq fyldlypreg kyghaacfgl qpgcllsdgs rlmsvaalvt nftkpasdrp
      481 sllrhdevkt yfhefghvmh qicaqtdfar fsgtnvetdf vevpsqmfen wvwekeplqq
      541 msrhykdatr vgdallekla asrlantgll tlrqivlskv dqalhtklsv dpadeyakyc
      601 meilgipatp gtnmpatfgh laggydgqyy gylwsevfsm difyscfkqe gimnpkagmk
      661 yrnlilkpgg sldgmdmlqn flerkpsqra fllskglcvq
//
LOCUS       XP_041326607             680 aa            linear   VRT 06-MAY-2021
DEFINITION  neurolysin, mitochondrial isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326607
VERSION     XP_041326607.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470673.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..680
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..680
                     /product="neurolysin, mitochondrial isoform X2"
                     /calculated_mol_wt=78188
     Region          34..672
                     /region_name="M3A_TOP"
                     /note="Peptidase M3 thimet oligopeptidase (TOP), also
                     includes neurolysin; cd06455"
                     /db_xref="CDD:341050"
     Site            order(473..474,477,502,600,605..606,608..609,612)
                     /site_type="active"
                     /db_xref="CDD:341050"
     CDS             1..680
                     /gene="NLN"
                     /coded_by="XM_041470673.1:125..2167"
                     /db_xref="GeneID:121355327"
ORIGIN      
        1 mtlgaeitsq lkassyiasg rnllrwdlsp eeirarteel lrktkhvyds vgmleieevt
       61 hentvralad ieveyavers mldfpqhvsp dkevrlaste adkklsnfdv emsmredvfq
      121 kivylqqtcd lenvkpetkr yleksvqvgr rnglhlpkev qkeiktmkkk lnelcidfnk
      181 nlneentflv fskeeldglp ddfinslekt ekdkykitlk yphyfpvmkk ccisetrrkm
      241 esafnsrcke entkilqqll plrakvaell gynthanfvl evntakstdn vatflddlsk
      301 klkplveeer qfildlkkke ckernfdydg rinawdlhyy mskteelkys idqerlkeyf
      361 pieavtegll niyqkllgle feqiesahvw hdsvtlytvk dkstgdmlgq fyldlypreg
      421 kyghaacfgl qpgcllsdgs rlmsvaalvt nftkpasdrp sllrhdevkt yfhefghvmh
      481 qicaqtdfar fsgtnvetdf vevpsqmfen wvwekeplqq msrhykdatr vgdallekla
      541 asrlantgll tlrqivlskv dqalhtklsv dpadeyakyc meilgipatp gtnmpatfgh
      601 laggydgqyy gylwsevfsm difyscfkqe gimnpkagmk yrnlilkpgg sldgmdmlqn
      661 flerkpsqra fllskglcvq
//
LOCUS       XP_041326608             577 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase TRIM23 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326608
VERSION     XP_041326608.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470674.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..577
                     /product="E3 ubiquitin-protein ligase TRIM23 isoform X1"
                     /calculated_mol_wt=63742
     Region          31..80
                     /region_name="mRING-HC-C3HC3D_TRIM23_C-IX"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in tripartite motif-containing protein 23 (TRIM23)
                     and similar proteins; cd16645"
                     /db_xref="CDD:438307"
     Region          126..175
                     /region_name="Bbox2_TRIM23_C-IX_rpt1"
                     /note="first B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 23 (TRIM23) and similar proteins;
                     cd19773"
                     /db_xref="CDD:380831"
     Region          177..226
                     /region_name="Bbox2_TRIM23_C-IX_rpt2"
                     /note="second B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 23 (TRIM23) and similar proteins;
                     cd19774"
                     /db_xref="CDD:380832"
     Region          229..373
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cl29238"
                     /db_xref="CDD:475168"
     Region          409..577
                     /region_name="ARD1"
                     /note="(ADP-ribosylation factor domain protein 1 (ARD1);
                     cd04158"
                     /db_xref="CDD:206723"
     Site            414..421
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206723"
     Site            order(416..422,437..438,460,516..517,519,550..552)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206723"
     Site            order(416..417,421,425,437..444,466,471)
                     /site_type="other"
                     /note="putative GAP interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206723"
     Site            426..441
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206723"
     Site            order(438..442,447,457,461,467,469..471)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206723"
     Site            438
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206723"
     Site            order(439..446,456,467,470..471)
                     /site_type="active"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206723"
     Site            442..456
                     /site_type="active"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206723"
     Site            order(448..451,558..561)
                     /site_type="other"
                     /note="YxxL localization motifs"
                     /db_xref="CDD:206723"
     Site            457..474
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206723"
     Site            457..460
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206723"
     Site            516..519
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206723"
     Site            550..552
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206723"
     CDS             1..577
                     /gene="TRIM23"
                     /coded_by="XM_041470674.1:69..1802"
                     /db_xref="GeneID:121355328"
ORIGIN      
        1 maalavnkag pesgrglggg grgpagaavk vlecgvcedv fslqgdkvpr lllcghtvch
       61 dcltrlplhg ravrcpfdrq vtelgdsgvw glkknfalle llerlqngpa gqygtaeegv
      121 glsgesiirc dedeahvasv yctvcathlc adcsqlthst ktlakhrrvp ladkphektm
      181 csqhqvhaie fvcleegcqa splmccvcke ygkhqghkhs vlepeanqir asildmahci
      241 rtfteeisdy srklvgivqh ieggeqived gvgmahtehv pgtaenarsc vrayfsdlhe
      301 tlcrqeemal svvdahvrek liwlrqqqed mtillsqvst aclhcektlq qddcrvvlak
      361 qeitrlletl qkqqqqftel adhvqldasi pvtftkdnrv higpkmeirv vtlgldgagk
      421 ttilfklkqd efmqpiptig fnvetveykn lkftiwdvgg khklrplwkh yylntqavvf
      481 vvdsshrdrv seayselakl ltekelrdal llifankqdv agalpveeit ellslhklcc
      541 grswyiqgcd arsgtglyeg ldwlsrqlva agvldva
//
LOCUS       XP_041326609             540 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase TRIM23 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326609
VERSION     XP_041326609.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470675.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..540
                     /product="E3 ubiquitin-protein ligase TRIM23 isoform X2"
                     /calculated_mol_wt=59236
     Region          31..80
                     /region_name="mRING-HC-C3HC3D_TRIM23_C-IX"
                     /note="Modified RING finger, HC subclass (C3HC3D-type),
                     found in tripartite motif-containing protein 23 (TRIM23)
                     and similar proteins; cd16645"
                     /db_xref="CDD:438307"
     Region          126..175
                     /region_name="Bbox2_TRIM23_C-IX_rpt1"
                     /note="first B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 23 (TRIM23) and similar proteins;
                     cd19773"
                     /db_xref="CDD:380831"
     Region          177..226
                     /region_name="Bbox2_TRIM23_C-IX_rpt2"
                     /note="second B-box-type 2 zinc finger found in tripartite
                     motif-containing protein 23 (TRIM23) and similar proteins;
                     cd19774"
                     /db_xref="CDD:380832"
     Region          229..373
                     /region_name="CC_brat-like"
                     /note="coiled-coil (CC) domain of Drosophila brain tumor
                     (brat) and similar proteins; cl29238"
                     /db_xref="CDD:475168"
     Region          409..540
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            414..421
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206648"
     Site            order(416..422,479..480,482,513..515)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206648"
     Site            438
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206648"
     Site            479..482
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206648"
     Site            513..515
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206648"
     CDS             1..540
                     /gene="TRIM23"
                     /coded_by="XM_041470675.1:69..1691"
                     /db_xref="GeneID:121355328"
ORIGIN      
        1 maalavnkag pesgrglggg grgpagaavk vlecgvcedv fslqgdkvpr lllcghtvch
       61 dcltrlplhg ravrcpfdrq vtelgdsgvw glkknfalle llerlqngpa gqygtaeegv
      121 glsgesiirc dedeahvasv yctvcathlc adcsqlthst ktlakhrrvp ladkphektm
      181 csqhqvhaie fvcleegcqa splmccvcke ygkhqghkhs vlepeanqir asildmahci
      241 rtfteeisdy srklvgivqh ieggeqived gvgmahtehv pgtaenarsc vrayfsdlhe
      301 tlcrqeemal svvdahvrek liwlrqqqed mtillsqvst aclhcektlq qddcrvvlak
      361 qeitrlletl qkqqqqftel adhvqldasi pvtftkdnrv higpkmeirv vtlgldgagk
      421 ttilfklkqd efmqpiptia vvfvvdsshr drvseaysel aklltekelr dalllifank
      481 qdvagalpve eitellslhk lccgrswyiq gcdarsgtgl yegldwlsrq lvaagvldva
//
LOCUS       XP_041326610             417 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking protein particle complex subunit 13 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326610
VERSION     XP_041326610.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470676.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..417
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..417
                     /product="trafficking protein particle complex subunit 13
                     isoform X1"
                     /calculated_mol_wt=46472
     Region          65..298
                     /region_name="DUF974"
                     /note="Protein of unknown function (DUF974); pfam06159"
                     /db_xref="CDD:461841"
     CDS             1..417
                     /gene="TRAPPC13"
                     /coded_by="XM_041470676.1:73..1326"
                     /db_xref="GeneID:121355329"
ORIGIN      
        1 mdvnqpkqeh llalkvmrlt kptlftnipv tceerdlpgn lfnqlmkddp stvkgaetlm
       61 lgemltlpqn fgniflgetf ssyisvhnds sqvvkdilvk adlqtssqrl nlsassaava
      121 elkpdccidd vihhevkeig thilvcavsy ttqtgekmyf rkffkfqvlk pldvktkfyn
      181 aesdlssvtd evfleaqiqn ittspmfmek vslepsmmyn vaelntvdta gesestfgar
      241 tylqpmdtrq ylyclkpkqe faekagvikg vtvigkldiv wktnlgergr lqtsqlqrma
      301 pgygdvrlsl etipdtvnle epfditckit ncssertmdl vlemcntnsi hwcgvsgrql
      361 gklhpssslh laltllssvq glqsvsglrl tdtflkrtye yddiaqvcvv sseikqs
//
LOCUS       XP_041326611             416 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking protein particle complex subunit 13 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326611
VERSION     XP_041326611.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470677.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..416
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..416
                     /product="trafficking protein particle complex subunit 13
                     isoform X2"
                     /calculated_mol_wt=46385
     Region          65..298
                     /region_name="DUF974"
                     /note="Protein of unknown function (DUF974); pfam06159"
                     /db_xref="CDD:461841"
     CDS             1..416
                     /gene="TRAPPC13"
                     /coded_by="XM_041470677.1:73..1323"
                     /db_xref="GeneID:121355329"
ORIGIN      
        1 mdvnqpkqeh llalkvmrlt kptlftnipv tceerdlpgn lfnqlmkddp stvkgaetlm
       61 lgemltlpqn fgniflgetf ssyisvhnds sqvvkdilvk adlqtssqrl nlsassaava
      121 elkpdccidd vihhevkeig thilvcavsy ttqtgekmyf rkffkfqvlk pldvktkfyn
      181 aesdlssvtd evfleaqiqn ittspmfmek vslepsmmyn vaelntvdta gesestfgar
      241 tylqpmdtrq ylyclkpkqe faekagvikg vtvigkldiv wktnlgergr lqtsqlqrma
      301 pgygdvrlsl etipdtvnle epfditckit ncsertmdlv lemcntnsih wcgvsgrqlg
      361 klhpssslhl altllssvqg lqsvsglrlt dtflkrtyey ddiaqvcvvs seikqs
//
LOCUS       XP_041326612             411 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking protein particle complex subunit 13 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326612
VERSION     XP_041326612.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470678.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..411
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..411
                     /product="trafficking protein particle complex subunit 13
                     isoform X3"
                     /calculated_mol_wt=45884
     Region          65..292
                     /region_name="DUF974"
                     /note="Protein of unknown function (DUF974); pfam06159"
                     /db_xref="CDD:461841"
     CDS             1..411
                     /gene="TRAPPC13"
                     /coded_by="XM_041470678.1:73..1308"
                     /db_xref="GeneID:121355329"
ORIGIN      
        1 mdvnqpkqeh llalkvmrlt kptlftnipv tceerdlpgn lfnqlmkddp stvkgaetlm
       61 lgemltlpqn fgniflgetf ssyisvhnds sqvvkdilvk adlqtssqrl nlsassaava
      121 elkpdccidd vihhevkeig thilvcavsy ttqtgekmyf rkffkfqvlk pldvktkfyn
      181 aetdevflea qiqnittspm fmekvsleps mmynvaelnt vdtagesest fgartylqpm
      241 dtrqylyclk pkqefaekag vikgvtvigk ldivwktnlg ergrlqtsql qrmapgygdv
      301 rlsletipdt vnleepfdit ckitncsser tmdlvlemcn tnsihwcgvs grqlgklhps
      361 sslhlaltll ssvqglqsvs glrltdtflk rtyeyddiaq vcvvsseikq s
//
LOCUS       XP_041326613             410 aa            linear   VRT 06-MAY-2021
DEFINITION  trafficking protein particle complex subunit 13 isoform X4
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326613
VERSION     XP_041326613.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470679.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..410
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..410
                     /product="trafficking protein particle complex subunit 13
                     isoform X4"
                     /calculated_mol_wt=45797
     Region          65..292
                     /region_name="DUF974"
                     /note="Protein of unknown function (DUF974); pfam06159"
                     /db_xref="CDD:461841"
     CDS             1..410
                     /gene="TRAPPC13"
                     /coded_by="XM_041470679.1:73..1305"
                     /db_xref="GeneID:121355329"
ORIGIN      
        1 mdvnqpkqeh llalkvmrlt kptlftnipv tceerdlpgn lfnqlmkddp stvkgaetlm
       61 lgemltlpqn fgniflgetf ssyisvhnds sqvvkdilvk adlqtssqrl nlsassaava
      121 elkpdccidd vihhevkeig thilvcavsy ttqtgekmyf rkffkfqvlk pldvktkfyn
      181 aetdevflea qiqnittspm fmekvsleps mmynvaelnt vdtagesest fgartylqpm
      241 dtrqylyclk pkqefaekag vikgvtvigk ldivwktnlg ergrlqtsql qrmapgygdv
      301 rlsletipdt vnleepfdit ckitncsert mdlvlemcnt nsihwcgvsg rqlgklhpss
      361 slhlaltlls svqglqsvsg lrltdtflkr tyeyddiaqv cvvsseikqs
//
LOCUS       XP_041326615             283 aa            linear   VRT 06-MAY-2021
DEFINITION  small glutamine-rich tetratricopeptide repeat-containing protein
            beta isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326615
VERSION     XP_041326615.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470681.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..283
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..283
                     /product="small glutamine-rich tetratricopeptide
                     repeat-containing protein beta isoform X1"
                     /calculated_mol_wt=31371
     Region          5..64
                     /region_name="SGTA_dimer"
                     /note="Homodimerization domain of SGTA; pfam16546"
                     /db_xref="CDD:465168"
     Region          <85..228
                     /region_name="NlpI"
                     /note="Lipoprotein NlpI, contains TPR repeats [Cell
                     wall/membrane/envelope biogenesis]; COG4785"
                     /db_xref="CDD:443815"
     Region          85..113
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(86,89..90,93..94,96,120,123..124,127..128,130..131,
                     154,157..158,161..162,165)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          118..148
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..181
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..283
                     /gene="SGTB"
                     /coded_by="XM_041470681.1:159..1010"
                     /db_xref="GeneID:121355330"
ORIGIN      
        1 mssvkrlvya virflreqsq mdtftpdeqe slevaiqcle tvfkitledt hlassqhlie
       61 mftnsiqknd mlplsrslpe gvakadqlkd egnnhmkeen ygaavdcytr aieldpnnav
      121 yycnraaaqs klnnfreaik dcesaiaidp kyskaygrmg laltsvnkye eavtsyqkal
      181 dldpendsyk snlkiaeqkl rdvsspaasl mqnpqiqqlm sgmmsnaigg paagvgglsd
      241 lsslihagqq faqqiqqqnp elieqlrnhi rsrylsgste ehs
//
LOCUS       XP_041326616             304 aa            linear   VRT 06-MAY-2021
DEFINITION  small glutamine-rich tetratricopeptide repeat-containing protein
            beta isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326616
VERSION     XP_041326616.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470682.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..304
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..304
                     /product="small glutamine-rich tetratricopeptide
                     repeat-containing protein beta isoform X2"
                     /calculated_mol_wt=33541
     Region          5..64
                     /region_name="SGTA_dimer"
                     /note="Homodimerization domain of SGTA; pfam16546"
                     /db_xref="CDD:465168"
     Region          85..113
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Site            order(86,89..90,93..94,96,120,123..124,127..128,130..131,
                     154,157..158,161..162,165)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          92..>202
                     /region_name="TPR"
                     /note="Tetratricopeptide (TPR) repeat [General function
                     prediction only]; COG0457"
                     /db_xref="CDD:440225"
     Region          118..148
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          153..181
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..304
                     /gene="SGTB"
                     /coded_by="XM_041470682.1:244..1158"
                     /db_xref="GeneID:121355330"
ORIGIN      
        1 mssvkrlvya virflreqsq mdtftpdeqe slevaiqcle tvfkitledt hlassqhlie
       61 mftnsiqknd mlplsrslpe gvakadqlkd egnnhmkeen ygaavdcytr aieldpnnav
      121 yycnraaaqs klnnfreaik dcesaiaidp kyskaygrmg laltsvnkye eavtsyqkal
      181 dldpendsyk snlkiaeqkl rdvssptgtg lsfdmaslin npafismaas lmqnpqiqql
      241 msgmmsnaig gpaagvggls dlsslihagq qfaqqiqqqn pelieqlrnh irsrylsgst
      301 eehs
//
LOCUS       XP_041326617             249 aa            linear   VRT 06-MAY-2021
DEFINITION  shieldin complex subunit 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326617
VERSION     XP_041326617.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470683.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="shieldin complex subunit 3"
                     /calculated_mol_wt=29017
     Region          1..61
                     /region_name="RBD_SHLD3_N"
                     /note="N-terminal REV7-binding domain of Shieldin complex
                     subunit 3 (SHLD3) and similar proteins; cd22293"
                     /db_xref="CDD:412089"
     Site            order(1..9,11,14,17..18,20,22..31,34..43,47..58)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:412089"
     CDS             1..249
                     /gene="SHLD3"
                     /coded_by="XM_041470683.1:222..971"
                     /db_xref="GeneID:121355331"
ORIGIN      
        1 mevvlhyrph qrdliklqkf aeaavkefpi rqlprfapwf pndlhrlplk pkkqapvisc
       61 eeveelkqls tpseyvtgst dydctknlle fhssmkhgpt liqaqvvhrp vnldcqgepp
      121 pngkqklkrs wsvslpstkl rekihplsqe lqnnlerlkl hafcrakwti eqsfcknenl
      181 ediwiklnrl ikqnelpscn atiqrsvgqi wifcdilyce yvrnilrekl sltdkmnllv
      241 hkygiifsl
//
LOCUS       XP_041326618             160 aa            linear   VRT 06-MAY-2021
DEFINITION  sterile alpha motif domain-containing protein 12 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326618
VERSION     XP_041326618.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470684.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..160
                     /product="sterile alpha motif domain-containing protein
                     12"
                     /calculated_mol_wt=17847
     Region          71..145
                     /region_name="SAM_aveugle-like"
                     /note="SAM domain of aveugle-like subfamily; cd09510"
                     /db_xref="CDD:188909"
     Site            order(101..105,108..109,112,117,120..121)
                     /site_type="other"
                     /note="heterodimer interface ML [polypeptide binding]"
                     /db_xref="CDD:188909"
     CDS             1..160
                     /gene="SAMD12"
                     /coded_by="XM_041470684.1:122..604"
                     /db_xref="GeneID:121355332"
ORIGIN      
        1 maveaihcnl npngidhpvp teginlqleg egvdslavkn tstpkgpesk dtpkrqvepe
       61 isksgtvklt kpvalwtqqd vckwlkkhcp nqyqiysesf kqhditgral lrltdkkler
      121 mgiaqeslrq hilqqvlqlk vreevrnlql ltqapaessp
//
LOCUS       XP_041326619            1176 aa            linear   VRT 06-MAY-2021
DEFINITION  integrin alpha-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326619
VERSION     XP_041326619.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470685.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1176
                     /product="integrin alpha-2"
                     /calculated_mol_wt=129117
     Region          166..345
                     /region_name="vWFA"
                     /note="Von Willebrand factor type A (vWA) domain was
                     originally found in the blood coagulation protein von
                     Willebrand factor (vWF). Typically, the vWA domain is made
                     up of approximately 200 amino acid residues folded into a
                     classic a/b para-rossmann type of...; cl00057"
                     /db_xref="CDD:469594"
     Site            order(173,243,276)
                     /site_type="other"
                     /note="metal ion-dependent adhesion site (MIDAS)"
                     /db_xref="CDD:238119"
     Region          425..470
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          479..>526
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          543..596
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          608..>632
                     /region_name="Int_alpha"
                     /note="Integrin alpha (beta-propellor repeats);
                     smart00191"
                     /db_xref="CDD:214549"
     Region          642..1052
                     /region_name="Integrin_alpha2"
                     /note="Integrin alpha; pfam08441"
                     /db_xref="CDD:462478"
     CDS             1..1176
                     /gene="ITGA2"
                     /coded_by="XM_041470685.1:62..3592"
                     /db_xref="GeneID:121355334"
ORIGIN      
        1 mgsagtapll lalgilhncc eaynvgllea kifsgprreq fgysvqqfin eqgkwllvgs
       61 pwsgypanrt gdiyacpvgv skstckklnl qalinipnvt eikkdmnlgl tliqnsktgg
      121 fltcgplwaq qcgrqyyatg vcseispsfe ilrsfspavq kcssvidvvv vcdesnsiyp
      181 wdavraflkk fvqgldigvn ktqvgliqya ndprvvfnln tyqtkdevvk amektsqkgg
      241 dltntfkaid narqyafsae sggrptatkv mvvvtdgesh dgsklktvig kcnednitrf
      301 giavlgylir heldtknlik eikgiashpt ekyffnvsse aalleeagtl gerifsiegt
      361 dqgdtfqmem sqvgfsayys qkkdvlllga vgaydwsgtv vqessdratt fpshvfekil
      421 qdrnhssylg ysvavlstms svyfvagapr snytgrvvvy nvdsdgnvai vqsqrgeqig
      481 syfgsvvcsv dvdrdsvtdv llvgapmfmn dlkkeegrvy mfsitkrild qqellegpqg
      541 senarfgsai aaladidldg sndvvigapl enqnsgaiyi yngfqktirt kysqkilgsd
      601 safgqklqff grsvdghrdl dddgitdvsv gadgnvvvlw srgianvsit asfkpekisl
      661 lnkstditvk icfqasfrpa kknnqvaiky natldadlqs srvtsrgffk ennerymqrd
      721 lvvhheencv hdvfsvqeps davnslslri diglanpgss pvldisspas vaysipfikd
      781 cgedelcicd lvlnvqqkad dskqqfivss knrrltfnvk lrnkkenayn triqatfsdn
      841 lffassslps dgtevscqtg taqstvicqi sypvfrtgqq vsfdisfdfn lknlqngavl
      901 sfhawseske qqdsdnqval siplrydaei hftrlaninf yevysghnip stvnnfedig
      961 pafnfsvkvt tgsipvkmat vtinlpelts kgnplmylta vttdeargit cdaqinplqi
     1021 gkrpyspsfm kenfraskel ncknakcsti tckledialk geyfvnvstq iwngtfaali
     1081 fqtlqlsaea kidtnnpelf iigentltip vtimkpdeka evpvgvvigs ilagllllli
     1141 lvavlwklgf fkrqyekmtq diedvdeiae ltkdkd
//
LOCUS       XP_041326620              86 aa            linear   VRT 06-MAY-2021
DEFINITION  molybdopterin synthase sulfur carrier subunit [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326620
VERSION     XP_041326620.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470686.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..86
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..86
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /calculated_mol_wt=9483
     Region          5..86
                     /region_name="Ubl_MoaD"
                     /note="ubiquitin-like (Ubl) domain found in molybdenum
                     cofactor biosynthesis protein D (MoaD) and similar
                     proteins; cd00754"
                     /db_xref="CDD:340452"
     Site            order(10..11,51,53..54,56,59..62,80..86)
                     /site_type="other"
                     /note="MoaD-MoeB interaction site [polypeptide binding]"
                     /db_xref="CDD:340452"
     Site            order(10..11,58..60,76,81..86)
                     /site_type="other"
                     /note="MoaD-MoaE interaction site [polypeptide binding]"
                     /db_xref="CDD:340452"
     Site            order(10..11,59..60,82..86)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:340452"
     Site            86
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:340452"
     CDS             1..86
                     /gene="MOCS2"
                     /coded_by="XM_041470686.1:132..392"
                     /db_xref="GeneID:121355335"
ORIGIN      
        1 mrcqvsvlyf arsaelaglr cetlsvprei tslqlweeiv kvhprlallr dqvvfavrqe
       61 yvllgdqllv lqpgdevaii ppisgg
//
LOCUS       XP_041326622            1305 aa            linear   VRT 06-MAY-2021
DEFINITION  ATPase family AAA domain-containing protein 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326622
VERSION     XP_041326622.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470688.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1305
                     /product="ATPase family AAA domain-containing protein 2
                     isoform X1"
                     /calculated_mol_wt=149133
     Region          369..537
                     /region_name="RecA-like_Yta7-like"
                     /note="ATPase domain of Saccharomyces cerevisiae Yta7 and
                     similar ATPase domains; cd19517"
                     /db_xref="CDD:410925"
     Site            order(413..416,419,472,516)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          917..1028
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(944,949,952,991,995,1005)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1305
                     /gene="ATAD2"
                     /coded_by="XM_041470688.1:1..3918"
                     /db_xref="GeneID:121355336"
ORIGIN      
        1 mvvlrssaar pprmaardsr crrppfdlld sssefisles palrshrvwt rsgsaraavs
       61 rgarraeeak fssgniecfn ghrlrsmrkn mprcsessfd ksmeilsenv nrhfsrqlak
      121 pksgpkkedy kevsgtlktr adtkaaeqvh eengdlevrr scrlrqsrya tanqsvlfdk
      181 litntaeavl qkmddmekmr rrrrmgdlee fhdteeesld mertdeeiad nqggsseese
      241 akeddgednr krysfrqrkt veryqaplqk prqrkmyfsd rsspvrqrds ckgtnrrrht
      301 vpssdsssss ddeeeferqr knrnlrrslp vnfrksdlkg vhkdrmkiga sladvdpvqi
      361 dcsvrfdgig glaehisalk emvvfpllyp evferfkiqp prgclfygpp gtgktlvara
      421 lanecsqgdr rvaffmrkga dclskwvges erqlrllfdq ayqmrpsiif fdeidglapv
      481 rsskqdqvhs svvstllalm dgldsrgevv vigatnrlds idpalrrpgr fdreflfslp
      541 nkearkeifk ihtrdwilkp ldkfleelad kcvgycgadi kalcaeaalc alrrrypqiy
      601 erseklqldi ssikitakdf vmamqktvpa sqravaspgr alspilkpll entlerilqa
      661 lqrvfphael alkkdqqqgn dvidseeesp sifeenpthk vhdrekaefl tlnrnprcqp
      721 tsfrprfllv edpgcgqafh lapavihale kfpvytldlp alfvsitspe etcaqlmrea
      781 qrtapsiiyv pqiplwwetv gptvkavftt llqniptfap vlllattdvk hgdlpeeika
      841 lfnndceevf kiqwptcaer rsffedlvmk qaaeppaskn nsarqplevl pvapppkprq
      901 lseeeikqle eqeedtlrel riylrdvthr lvidkrfraf tkpvdpeevp dynavikqpm
      961 dlstvlskid mhqyptardf lkdidlicsn aleynpakdp gdrllrhrac alrdtaysiv
     1021 reemdedfeq rcqeikesrk qrgsdcassy ccvmpeedsv pgckktdpkc neklkilavp
     1081 vdvstpcskd kskrkrkrnr esssirtkkr nvqfnkenki pedqnevesn eesntdctef
     1141 assqdspiee henvlqerqk ngtenererv llvgkspsgk krehsdlreq sempdcqkag
     1201 tsedgrsddl wvhrmtrars sqveekqlgc vgkamkigtq rvfvdycelk qvlhsiavvt
     1261 envsifrmek lyavlsqciy qhredgdkne lvkamkkeit afhdt
//
LOCUS       XP_041326623            1254 aa            linear   VRT 06-MAY-2021
DEFINITION  ATPase family AAA domain-containing protein 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326623
VERSION     XP_041326623.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470689.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1254
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1254
                     /product="ATPase family AAA domain-containing protein 2
                     isoform X2"
                     /calculated_mol_wt=143401
     Region          318..486
                     /region_name="RecA-like_Yta7-like"
                     /note="ATPase domain of Saccharomyces cerevisiae Yta7 and
                     similar ATPase domains; cd19517"
                     /db_xref="CDD:410925"
     Site            order(362..365,368,421,465)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:410925"
     Region          866..977
                     /region_name="Bromo_AAA"
                     /note="Bromodomain; sub-family co-occurring with AAA
                     domains. Bromodomains are 110 amino acid long domains,
                     that are found in many chromatin associated proteins.
                     Bromodomains can interact specifically with acetylated
                     lysine. The structure(2DKW) in this...; cd05528"
                     /db_xref="CDD:99957"
     Site            order(893,898,901,940,944,954)
                     /site_type="other"
                     /note="putative acetyllysine binding site [chemical
                     binding]"
                     /db_xref="CDD:99957"
     CDS             1..1254
                     /gene="ATAD2"
                     /coded_by="XM_041470689.1:71..3835"
                     /db_xref="GeneID:121355336"
ORIGIN      
        1 mpsprkprps rlgagasrkf ssgniecfng hrlrsmrknm prcsessfdk smeilsenvn
       61 rhfsrqlakp ksgpkkedyk evsgtlktra dtkaaeqvhe engdlevrrs crlrqsryat
      121 anqsvlfdkl itntaeavlq kmddmekmrr rrrmgdleef hdteeesldm ertdeeiadn
      181 qggsseesea keddgednrk rysfrqrktv eryqaplqkp rqrkmyfsdr sspvrqrdsc
      241 kgtnrrrhtv pssdsssssd deeeferqrk nrnlrrslpv nfrksdlkgv hkdrmkigas
      301 ladvdpvqid csvrfdgigg laehisalke mvvfpllype vferfkiqpp rgclfygppg
      361 tgktlvaral anecsqgdrr vaffmrkgad clskwvgese rqlrllfdqa yqmrpsiiff
      421 deidglapvr sskqdqvhss vvstllalmd gldsrgevvv igatnrldsi dpalrrpgrf
      481 dreflfslpn kearkeifki htrdwilkpl dkfleeladk cvgycgadik alcaeaalca
      541 lrrrypqiye rseklqldis sikitakdfv mamqktvpas qravaspgra lspilkplle
      601 ntlerilqal qrvfphaela lkkdqqqgnd vidseeesps ifeenpthkv hdrekaeflt
      661 lnrnprcqpt sfrprfllve dpgcgqafhl apavihalek fpvytldlpa lfvsitspee
      721 tcaqlmreaq rtapsiiyvp qiplwwetvg ptvkavfttl lqniptfapv lllattdvkh
      781 gdlpeeikal fnndceevfk iqwptcaerr sffedlvmkq aaeppasknn sarqplevlp
      841 vapppkprql seeeikqlee qeedtlrelr iylrdvthrl vidkrfraft kpvdpeevpd
      901 ynavikqpmd lstvlskidm hqyptardfl kdidlicsna leynpakdpg drllrhraca
      961 lrdtaysivr eemdedfeqr cqeikesrkq rgsdcassyc cvmpeedsvp gckktdpkcn
     1021 eklkilavpv dvstpcskdk skrkrkrnre sssirtkkrn vqfnkenkip edqnevesne
     1081 esntdctefa ssqdspieeh envlqerqkn gtenerervl lvgkspsgkk rehsdlreqs
     1141 empdcqkagt sedgrsddlw vhrmtrarss qveekqlgcv gkamkigtqr vfvdycelkq
     1201 vlhsiavvte nvsifrmekl yavlsqciyq hredgdknel vkamkkeita fhdt
//
LOCUS       XP_041326624             208 aa            linear   VRT 06-MAY-2021
DEFINITION  protein N-terminal glutamine amidohydrolase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326624
VERSION     XP_041326624.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470690.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..208
                     /product="protein N-terminal glutamine amidohydrolase
                     isoform X1"
                     /calculated_mol_wt=24127
     Region          20..197
                     /region_name="Nt_Gln_amidase"
                     /note="N-terminal glutamine amidase; pfam09764"
                     /db_xref="CDD:462887"
     CDS             1..208
                     /gene="NTAQ1"
                     /coded_by="XM_041470690.1:69..695"
                     /db_xref="GeneID:121355337"
ORIGIN      
        1 marpeagyev avpprptcty tscyceenvw klcdyirsqd rypleefyav fisndkrmip
       61 lwkqksghgd epvvwdyhvi llhlssgeqn fiydldtvlp fpcpfdvysv eafrlddslr
      121 pefhrkirmi radlylktfa sdrshmkdan gkwqkppppy pcietadskm nlddfismnp
      181 evgwgsvfsl sdfvhrfgsq tdyslegq
//
LOCUS       XP_041326625             160 aa            linear   VRT 06-MAY-2021
DEFINITION  protein N-terminal glutamine amidohydrolase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326625
VERSION     XP_041326625.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470691.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..160
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..160
                     /product="protein N-terminal glutamine amidohydrolase
                     isoform X2"
                     /calculated_mol_wt=18415
     Region          <28..149
                     /region_name="Nt_Gln_amidase"
                     /note="N-terminal glutamine amidase; pfam09764"
                     /db_xref="CDD:462887"
     CDS             1..160
                     /gene="NTAQ1"
                     /coded_by="XM_041470691.1:168..650"
                     /db_xref="GeneID:121355337"
ORIGIN      
        1 memsllsgcf wqlntrhsns qtvllqqdyh villhlssge qnfiydldtv lpfpcpfdvy
       61 sveafrldds lrpefhrkir miradlylkt fasdrshmkd angkwqkppp pypcietads
      121 kmnlddfism npevgwgsvf slsdfvhrfg sqtdyslegq
//
LOCUS       XP_041326626             878 aa            linear   VRT 06-MAY-2021
DEFINITION  mdm2-binding protein [Pyrgilauda ruficollis].
ACCESSION   XP_041326626
VERSION     XP_041326626.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470692.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..878
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..878
                     /product="mdm2-binding protein"
                     /calculated_mol_wt=97823
     Region          1..254
                     /region_name="MTBP_N"
                     /note="MDM2-binding; pfam14918"
                     /db_xref="CDD:464374"
     Region          279..613
                     /region_name="MTBP_mid"
                     /note="MDM2-binding; pfam14919"
                     /db_xref="CDD:464375"
     Region          617..869
                     /region_name="MTBP_C"
                     /note="MDM2-binding; pfam14920"
                     /db_xref="CDD:464376"
     CDS             1..878
                     /gene="LOC121355338"
                     /coded_by="XM_041470692.1:118..2754"
                     /db_xref="GeneID:121355338"
ORIGIN      
        1 mdryvlllsw gerragpgpg paaataaagt aadvyqflke scnasinadv sifpacsvag
       61 vpgakkwyfa shvicgyyqf cssdweeinv dtqknedsyq asidenlgtt qsfeeddnsq
      121 eslsltdiyd eaaeslhqla dklpapgram vdvilqavec dgpklkdclp aigalkhlre
      181 whsaritiaa sdakgswqki adylsadfvs sddimniidl nelwrgkiqi werkfasgvd
      241 fpefciksts aktfrtanls scfadkkecq lrntdtlpev fhyygpalef lqmvvlsdlp
      301 sifisdlefe lslsrkntke tstllldqis flsgkvgalf tlpcnvssvv ipspaqlstk
      361 kwkeymakkp kvisvpeiel kgescryyfl lqgngsggck atlihsagqi ngmatlaavn
      421 gklkakaeet esgfnisdci kslpcycged ilqretklsr lqvfalkeyl krkemtkqpv
      481 vistnefksl lkltrecfld lcstslpkpl lqkvcsktrs ctetrdpdli epnplewper
      541 hvlqnlenfe knkqkmrvpl fahspeqllg hkdgqreslt lldakellky ftpeglpvgd
      601 lqplqvpkre naflltpelt prklrglpfe kaagchyhgl eycldnrral erdvgyaelq
      661 trliryetqt tctkeccpvp lvlsplpspa vlsepgsvpd getlqsefkt etsrlkyrsk
      721 dldyfypkkr ltksestdsl lsqaggssrs rcavavprkr sersvceaav pwkapsqghr
      781 aatragsate peaakpekes rsqkhtrmlk evvaktlqky giaedhkcfa scsqrlfeis
      841 kfylkdlkts rglldemkkt ansnakqvie wvlektsk
//
LOCUS       XP_041326627             179 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L13, mitochondrial isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326627
VERSION     XP_041326627.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470693.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..179
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..179
                     /product="39S ribosomal protein L13, mitochondrial isoform
                     X1"
                     /calculated_mol_wt=20478
     Region          16..134
                     /region_name="Ribosomal_L13"
                     /note="Ribosomal protein L13; pfam00572"
                     /db_xref="CDD:459856"
     CDS             1..179
                     /gene="MRPL13"
                     /coded_by="XM_041470693.1:34..573"
                     /db_xref="GeneID:121355339"
ORIGIN      
        1 masysraaqq watfgrawyl ldakmqppgk iaaatvirle gkhkpiyhal ndcgdhvvii
       61 ntrhiafsgn kweqkvyssh tgypggfkqv tatqlhlkdp taivklavyr mlpknlqrrt
      121 lmqrlhlfpe dvipediekn llqeipqpra vpkrldeytp eeiaafpkvw tppkdfrrk
//
LOCUS       XP_041326628             155 aa            linear   VRT 06-MAY-2021
DEFINITION  39S ribosomal protein L13, mitochondrial isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326628
VERSION     XP_041326628.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470694.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..155
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..155
                     /product="39S ribosomal protein L13, mitochondrial isoform
                     X2"
                     /calculated_mol_wt=17704
     Region          2..110
                     /region_name="Ribosomal_L13"
                     /note="Ribosomal protein L13; pfam00572"
                     /db_xref="CDD:459856"
     CDS             1..155
                     /gene="MRPL13"
                     /coded_by="XM_041470694.1:229..696"
                     /db_xref="GeneID:121355339"
ORIGIN      
        1 mqppgkiaaa tvirlegkhk piyhalndcg dhvviintrh iafsgnkweq kvysshtgyp
       61 ggfkqvtatq lhlkdptaiv klavyrmlpk nlqrrtlmqr lhlfpedvip edieknllqe
      121 ipqpravpkr ldeytpeeia afpkvwtppk dfrrk
//
LOCUS       XP_041326630             477 aa            linear   VRT 06-MAY-2021
DEFINITION  spliceosome-associated protein CWC27 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326630
VERSION     XP_041326630.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470696.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..477
                     /product="spliceosome-associated protein CWC27 homolog
                     isoform X1"
                     /calculated_mol_wt=55209
     Region          8..178
                     /region_name="cyclophilin_CeCYP16-like"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerase) (PPIase) domain similar to Caenorhabditis
                     elegans cyclophilin 16. C. elegans CeCYP-16, compared to
                     the archetypal cyclophilin Human cyclophilin A has, a
                     reduced peptidylprolyl cis- trans isomerase...; cd01925"
                     /db_xref="CDD:238906"
     Site            order(55..56,61,112,114,122)
                     /site_type="active"
                     /db_xref="CDD:238906"
     Region          <232..400
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          381..433
                     /region_name="CWC27_CTD"
                     /note="C-terminal domain of spliceosome-associated protein
                     CWC27 and similar proteins; cd22288"
                     /db_xref="CDD:412084"
     Site            order(385,387,389..394,396..398,400..402,405,411,417..419,
                     421..424,426..431)
                     /site_type="other"
                     /note="CWC27 binding site [polypeptide binding]"
                     /db_xref="CDD:412084"
     CDS             1..477
                     /gene="CWC27"
                     /coded_by="XM_041470696.1:246..1679"
                     /db_xref="GeneID:121355340"
ORIGIN      
        1 msniyiqepp tngkvllrtt ageidielws keapkacrnf iqlcmeeyyn ntifhrvvpg
       61 fivqggdptg tgsggesvyg apfkdefhsr lrfnrrglva managphdng sqffftlgra
      121 delnnkhtif gkvtgdtiyn mlrlaevevd keerplsphk irssevlfnp fddivprpnr
      181 klkkdkpeed skkskvkgtk nfnllsfgee aeeeeeevsr vsqsmkgksk sshdllkddp
      241 hlssvpavks evadeekdls edeeeydeda dsvedeaash erfqikeria kklkidtsen
      301 tkqqlqeeet kterkttsrs eelrkearql krelleakhk keeralrlkd keeeepapns
      361 vveeylqekr kyedkrkqqp kkgvsredqt lalldrfktk ltqaieetpe nelsepdvdn
      421 degwmshvlq fedrsrkvkd asmqdedtfe iydprnpvtk rrreeskkim rekkerr
//
LOCUS       XP_041326631             439 aa            linear   VRT 06-MAY-2021
DEFINITION  spliceosome-associated protein CWC27 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326631
VERSION     XP_041326631.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470697.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..439
                     /product="spliceosome-associated protein CWC27 homolog
                     isoform X2"
                     /calculated_mol_wt=51102
     Region          8..178
                     /region_name="cyclophilin_CeCYP16-like"
                     /note="cyclophilin-type peptidylprolyl cis- trans
                     isomerase) (PPIase) domain similar to Caenorhabditis
                     elegans cyclophilin 16. C. elegans CeCYP-16, compared to
                     the archetypal cyclophilin Human cyclophilin A has, a
                     reduced peptidylprolyl cis- trans isomerase...; cd01925"
                     /db_xref="CDD:238906"
     Site            order(55..56,61,112,114,122)
                     /site_type="active"
                     /db_xref="CDD:238906"
     Region          <236..431
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          343..395
                     /region_name="CWC27_CTD"
                     /note="C-terminal domain of spliceosome-associated protein
                     CWC27 and similar proteins; cd22288"
                     /db_xref="CDD:412084"
     Site            order(347,349,351..356,358..360,362..364,367,373,379..381,
                     383..386,388..393)
                     /site_type="other"
                     /note="CWC27 binding site [polypeptide binding]"
                     /db_xref="CDD:412084"
     CDS             1..439
                     /gene="CWC27"
                     /coded_by="XM_041470697.1:247..1566"
                     /db_xref="GeneID:121355340"
ORIGIN      
        1 msniyiqepp tngkvllrtt ageidielws keapkacrnf iqlcmeeyyn ntifhrvvpg
       61 fivqggdptg tgsggesvyg apfkdefhsr lrfnrrglva managphdng sqffftlgra
      121 delnnkhtif gkvtgdtiyn mlrlaevevd keerplsphk irssevlfnp fddivprpnr
      181 klkkdkpeed skkskvkgtk nfnllsfgee aeeeeeevsr vsqdeeeyde dadsvedeaa
      241 sherfqiker iakklkidts entkqqlqee etkterktts rseelrkear qlkrelleak
      301 hkkeeralrl kdkeeeepap nsvveeylqe krkyedkrkq qpkkgvsred qtlalldrfk
      361 tkltqaieet penelsepdv dndegwmshv lqfedrsrkv kdasmqdedt feiydprnpv
      421 tkrrreeskk imrekkerr
//
LOCUS       XP_041326632             255 aa            linear   VRT 06-MAY-2021
DEFINITION  regulator of G-protein signaling 7-binding protein [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326632
VERSION     XP_041326632.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470698.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..255
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..255
                     /product="regulator of G-protein signaling 7-binding
                     protein"
                     /calculated_mol_wt=28766
     CDS             1..255
                     /gene="LOC121355341"
                     /coded_by="XM_041470698.1:65..832"
                     /db_xref="GeneID:121355341"
ORIGIN      
        1 msaapsgrrk rprsaasifq gsrtsphgrd serrgsgsds vyqtqrtldd ckmlvqefnt
       61 qvalyrelvi sigdvsvtcp slhaelhktr trgcemayqa hqklaaisgp edgeihpeic
      121 rlyiqlqccl emyttemlks icllgslqfh rkgkepcgpp klldtkvees sevpiledts
      181 lsptdiqqhl wqvstdient erdmremknl lsklretmpl plknqddssl lnltpyplvr
      241 rrkrrffglc clvss
//
LOCUS       XP_041326633             156 aa            linear   VRT 06-MAY-2021
DEFINITION  protein SREK1IP1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326633
VERSION     XP_041326633.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470699.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..156
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..156
                     /product="protein SREK1IP1"
                     /calculated_mol_wt=17854
     Region          9..>30
                     /region_name="zf-CCHC_3"
                     /note="Zinc knuckle; pfam13917"
                     /db_xref="CDD:404753"
     CDS             1..156
                     /gene="SREK1IP1"
                     /coded_by="XM_041470699.1:88..558"
                     /db_xref="GeneID:121355342"
ORIGIN      
        1 malpggnkdn iragckkcgy pghltfecrn flrvdpqrdi vldvsstsse dseeeelqrl
       61 qamrekknln eeeekkkqkr kskektklkr prkrssssss adedepkskk qkshkkekek
      121 gkkhkskkgk hhkkekkkrr kekssssnss dssssd
//
LOCUS       XP_041326634             623 aa            linear   VRT 06-MAY-2021
DEFINITION  protein LYRIC isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326634
VERSION     XP_041326634.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470700.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..623
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..623
                     /product="protein LYRIC isoform X1"
                     /calculated_mol_wt=66745
     Region          6..468
                     /region_name="LYRIC"
                     /note="Lysine-rich CEACAM1 co-isolated protein family;
                     pfam15686"
                     /db_xref="CDD:434858"
     CDS             1..623
                     /gene="MTDH"
                     /coded_by="XM_041470700.1:222..2093"
                     /db_xref="GeneID:121355343"
ORIGIN      
        1 maagswqeaa arwaeeaaar vrdalsgglg llraelglel gldpqalptw lalavpaalg
       61 fvllglllaa acggglrkkp arsaavrkgd eavgagltag ggqgksagpg pgqlnlkgde
      121 qkkrnrkklp ekaarpngrs flevsedvvi qavhkdnikq pvdtekknek skkkkkskgd
      181 sktvqdtsrl dgkevdegaw etkisnrekr qqrkrdkvln dggsgesnlq gientvtvsi
      241 eqlmptpslp vglrknkgdt llnaqinssk pakgessipq vspglsesht vnggswneks
      301 vkissqigvg eekwtsvpst aagkrktetl awgqdtgdan gngkdwgvsl vgrpwkersl
      361 ftpiaawnvd arintseqns tsfssfgltp gvsgsnsesv sqagtsdfqw dlshaqppvd
      421 dewsglngls sadpssdwna paeewgnwvd eekvtsvpqr eersdtqkis dnerekaepi
      481 lqsstsgksk kkkkkkkkqg eeanspaqda eeldreageq fqadtskvqa qqerafslkt
      541 istsetakse eapslavste psvivsesns dkiasqvpqm lqetdvsspn ikqnsvpppq
      601 tkseeswesp kqvkkkkkar ret
//
LOCUS       XP_041326635             583 aa            linear   VRT 06-MAY-2021
DEFINITION  protein LYRIC isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326635
VERSION     XP_041326635.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470701.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..583
                     /product="protein LYRIC isoform X2"
                     /calculated_mol_wt=62318
     Region          6..468
                     /region_name="LYRIC"
                     /note="Lysine-rich CEACAM1 co-isolated protein family;
                     pfam15686"
                     /db_xref="CDD:434858"
     CDS             1..583
                     /gene="MTDH"
                     /coded_by="XM_041470701.1:222..1973"
                     /db_xref="GeneID:121355343"
ORIGIN      
        1 maagswqeaa arwaeeaaar vrdalsgglg llraelglel gldpqalptw lalavpaalg
       61 fvllglllaa acggglrkkp arsaavrkgd eavgagltag ggqgksagpg pgqlnlkgde
      121 qkkrnrkklp ekaarpngrs flevsedvvi qavhkdnikq pvdtekknek skkkkkskgd
      181 sktvqdtsrl dgkevdegaw etkisnrekr qqrkrdkvln dggsgesnlq gientvtvsi
      241 eqlmptpslp vglrknkgdt llnaqinssk pakgessipq vspglsesht vnggswneks
      301 vkissqigvg eekwtsvpst aagkrktetl awgqdtgdan gngkdwgvsl vgrpwkersl
      361 ftpiaawnvd arintseqns tsfssfgltp gvsgsnsesv sqagtsdfqw dlshaqppvd
      421 dewsglngls sadpssdwna paeewgnwvd eekvtsvpqr eersdtqkis dnerekaepi
      481 lqsstsgksk kkkkkkkkqg eeanspaqse eapslavste psvivsesns dkiasqvpqm
      541 lqetdvsspn ikqnsvpppq tkseeswesp kqvkkkkkar ret
//
LOCUS       XP_041326636              76 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger protein 706 [Pyrgilauda ruficollis].
ACCESSION   XP_041326636
VERSION     XP_041326636.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470702.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..76
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..76
                     /product="zinc finger protein 706"
                     /calculated_mol_wt=8439
     Region          <41..>65
                     /region_name="DUF4371"
                     /note="Domain of unknown function (DUF4371); cl46273"
                     /db_xref="CDD:480613"
     CDS             1..76
                     /gene="ZNF706"
                     /coded_by="XM_041470702.1:160..390"
                     /db_xref="GeneID:121355344"
ORIGIN      
        1 margqqkiqs qqknakkqae qkkkqghdqk aaakaaliyt ctvcrtqmpd pktfkqhfes
       61 khpktplppe ladvqa
//
LOCUS       XP_041326637             679 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF2A isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326637
VERSION     XP_041326637.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470703.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..679
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..679
                     /product="kinesin-like protein KIF2A isoform X1"
                     /calculated_mol_wt=76778
     Region          196..524
                     /region_name="KISc_KIF2_like"
                     /note="Kinesin motor domain, KIF2-like group; cd01367"
                     /db_xref="CDD:276818"
     Site            order(204,286,289,291..294,430)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276818"
     Site            order(478,481,484)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276818"
     CDS             1..679
                     /gene="KIF2A"
                     /coded_by="XM_041470703.1:13..2052"
                     /db_xref="GeneID:121355345"
ORIGIN      
        1 mvtslnedne svtvewieng dtkgkeidle sifslnpdla hdediepspe alpppassak
       61 vnkivksrrt vlptkndppa rdnrvvgsar arptqlpeqs sssqqngsvs dispvqaakk
      121 efgppsrrks ncvkeveklq ekrekrrlqq qelrekraqd vdatnpnyei mcmirdfrgs
      181 ldyrplttad pidehricvc vrkrplnkke tlmkdldvit ipskdvvmvh epkqkvdltr
      241 ylenqtfrfd yafddtapne mvyrftarpl vetifergma tcfaygqtgs gkthtmggdf
      301 sgknqdcskg iyalaardvf lmlkkpnykk lelqvyatff eiysgkvfdl lnrktklrvl
      361 edgkqqvqvv glqerevkcv edvlklievg nscrtsgqts anahssrsha vfqiilrrkg
      421 klhgkfslid lagnergadt ssadrqtrle gaeinkslla lkeciralgr nkphtpfras
      481 kltqvlrdsf igensrtcmi atispgmasc entlntlrya nrvkeltvdp sgagdirsii
      541 hhapnqmddl etqwgvgssp qrddlkllce qneeevspql fsfheavsqm vemeeqvved
      601 hrtvfqesir wlevekllle mteevdydvd syatqleail eqkidvltel rdkvksfraa
      661 lqeeeqaskq inpkrpral
//
LOCUS       XP_041326638             660 aa            linear   VRT 06-MAY-2021
DEFINITION  kinesin-like protein KIF2A isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326638
VERSION     XP_041326638.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470704.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..660
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..660
                     /product="kinesin-like protein KIF2A isoform X2"
                     /calculated_mol_wt=74866
     Region          177..505
                     /region_name="KISc_KIF2_like"
                     /note="Kinesin motor domain, KIF2-like group; cd01367"
                     /db_xref="CDD:276818"
     Site            order(185,267,270,272..275,411)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276818"
     Site            order(459,462,465)
                     /site_type="other"
                     /note="microtubule interaction site [polypeptide binding]"
                     /db_xref="CDD:276818"
     CDS             1..660
                     /gene="KIF2A"
                     /coded_by="XM_041470704.1:13..1995"
                     /db_xref="GeneID:121355345"
ORIGIN      
        1 mvtslnedne svtvewieng dtkgkeidle sifslnpdla hdediepspe alpppassak
       61 vnkivksrrt vlptkndppa rdnrvvgsar arptqlpeqs sssqqnarrk sncvkevekl
      121 qekrekrrlq qqelrekraq dvdatnpnye imcmirdfrg sldyrpltta dpidehricv
      181 cvrkrplnkk etlmkdldvi tipskdvvmv hepkqkvdlt rylenqtfrf dyafddtapn
      241 emvyrftarp lvetifergm atcfaygqtg sgkthtmggd fsgknqdcsk giyalaardv
      301 flmlkkpnyk klelqvyatf feiysgkvfd llnrktklrv ledgkqqvqv vglqerevkc
      361 vedvlkliev gnscrtsgqt sanahssrsh avfqiilrrk gklhgkfsli dlagnergad
      421 tssadrqtrl egaeinksll alkeciralg rnkphtpfra skltqvlrds figensrtcm
      481 iatispgmas centlntlry anrvkeltvd psgagdirsi ihhapnqmdd letqwgvgss
      541 pqrddlkllc eqneeevspq lfsfheavsq mvemeeqvve dhrtvfqesi rwleveklll
      601 emteevdydv dsyatqleai leqkidvlte lrdkvksfra alqeeeqask qinpkrpral
//
LOCUS       XP_041326639             305 aa            linear   VRT 06-MAY-2021
DEFINITION  probable dimethyladenosine transferase isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326639
VERSION     XP_041326639.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470705.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..305
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..305
                     /product="probable dimethyladenosine transferase isoform
                     X1"
                     /calculated_mol_wt=34297
     Region          15..304
                     /region_name="PTZ00338"
                     /note="dimethyladenosine transferase-like protein;
                     Provisional"
                     /db_xref="CDD:240367"
     Site            order(55..61,77..78,104..106,120)
                     /site_type="other"
                     /note="S-adenosylmethionine binding site [chemical
                     binding]"
                     /db_xref="CDD:100107"
     CDS             1..305
                     /gene="DIMT1"
                     /coded_by="XM_041470705.1:146..1063"
                     /db_xref="GeneID:121355347"
ORIGIN      
        1 mpkaragkrp erregraggi lfntgagqhi lknplvvnsi idkaalrrtd vilevgpgtg
       61 nltvkmlekv kkviaceidp rlvgelqkrv qgtclankle ikvgdilktd lpffdacvan
      121 lpyqisspfv fklllhrpff rcailmfqre falrlvakpg sklycrlsin tqllarvdhl
      181 mkvgknnfrp ppkvessvvr iepknppppi nfqewdglvr iafvrknktl saafkssave
      241 qlldhnyrvh cslhnteipe nfkiaekiqt vlkdtgysek rarsmdiddf irllhgfnse
      301 gihfs
//
LOCUS       XP_041326640             191 aa            linear   VRT 06-MAY-2021
DEFINITION  probable dimethyladenosine transferase isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326640
VERSION     XP_041326640.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470706.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..191
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..191
                     /product="probable dimethyladenosine transferase isoform
                     X2"
                     /calculated_mol_wt=22151
     Region          <26..190
                     /region_name="AdoMet_MTases"
                     /note="S-adenosylmethionine-dependent methyltransferases
                     (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes
                     that use S-adenosyl-L-methionine (SAM or AdoMet) as a
                     substrate for methyltransfer, creating the product
                     S-adenosyl-L-homocysteine (AdoHcy); cl17173"
                     /db_xref="CDD:473071"
     CDS             1..191
                     /gene="DIMT1"
                     /coded_by="XM_041470706.1:207..782"
                     /db_xref="GeneID:121355347"
ORIGIN      
        1 mhawltyltr flhllfsnyc fidlffrcai lmfqrefalr lvakpgskly crlsintqll
       61 arvdhlmkvg knnfrpppkv essvvriepk nppppinfqe wdglvriafv rknktlsaaf
      121 kssaveqlld hnyrvhcslh nteipenfki aekiqtvlkd tgysekrars mdiddfirll
      181 hgfnsegihf s
//
LOCUS       XP_041326642             201 aa            linear   VRT 06-MAY-2021
DEFINITION  syndecan-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326642
VERSION     XP_041326642.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470708.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..201
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..201
                     /product="syndecan-2"
                     /calculated_mol_wt=21797
     Region          138..200
                     /region_name="Syndecan"
                     /note="Syndecan domain; pfam01034"
                     /db_xref="CDD:460035"
     CDS             1..201
                     /gene="SDC2"
                     /coded_by="XM_041470708.1:155..760"
                     /db_xref="GeneID:121355348"
ORIGIN      
        1 mrgvwlaltv sfvacasgqp radltsdkdl yldnssveea sgvypidddd yssgsgsgae
       61 ededsavitt srtvpklptt sdasraettt vkmqtkvpaq tkspeeidke erpevdakkk
      121 sdepgddtdv ltqkhsenlf qrtevlaavi aggvigflfa iflilllvyr mrkkdegsyd
      181 lgerkpscaa yqkaptkefy a
//
LOCUS       XP_041326643            1200 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription initiation factor TFIID subunit 2 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326643
VERSION     XP_041326643.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470709.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1200
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1200
                     /product="transcription initiation factor TFIID subunit 2
                     isoform X1"
                     /calculated_mol_wt=137514
     Region          18..513
                     /region_name="M1_like_TAF2"
                     /note="TATA binding protein (TBP) associated factor 2;
                     cd09839"
                     /db_xref="CDD:341074"
     Site            order(147,170,175,178,302,305,325..327,379..380,383..384,
                     386..387,389..390,393,422,511)
                     /site_type="other"
                     /note="intramolecular interface [polypeptide binding]"
                     /db_xref="CDD:341074"
     Site            order(457..458,461,465,469,496)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:341074"
     CDS             1..1200
                     /gene="TAF2"
                     /coded_by="XM_041470709.1:73..3675"
                     /db_xref="GeneID:121355349"
ORIGIN      
        1 mnrkkgdkgf esprpyklth qvvcinninf qrksvvgyve ltifptvanl nriklnskqc
       61 riyrvrvndl eaafiyndpt levchheskq rnlnyfsnay aaavsavdpd agngelcikv
      121 pselwkhvde lkvlkvhinf sldqpkgglh fvvpnmegnm aergahvfsc gyqnstrfwf
      181 pcvdsyselc twkleytvda amvavsngdl vetvythdmr kktfhymlti ptaasnisla
      241 igpfeilvdp ymhevthfcl pqllpllkht tsylhevfef yeeiltcryp yscfktvfid
      301 eayvevaaya smsifstnll hsamiidetp ltrrclaqal aqqffgcfis rmswsdewvl
      361 kgisgyiygl wmkktfgvne yrhwikqeld qivayelktg gvllhpifgg gkekdnpash
      421 lhfsikhpht lsweyytmfq ckahlvmrli enrismefml qvfnkllsla stassqkfqs
      481 hmwsqmlvst sgflksisnv sgkdiqplik qwvdqsgvvk fygsfafnrk rnvleleikq
      541 dytspgtqky vgplkvtvqe ldgsfnhtlq ieenslkhdi pchsksrrnk kkkiplmnge
      601 evdmdlsamd adspllwiri dpdmsvlrkv efeqsdfmwq yqlryerdvv aqeeailale
      661 kfptpasrla ltdileqeqc fyrvrmlacf clakiansmv stwtgppamk slftrmfcck
      721 tcpnivktnn fmnfqsyflq ktmpvamall rdvhnlcpke vlmfildlik yndnrknkfs
      781 dnyyraelid alansvtpav svnnevrtld nlnpdvrlil eeitrflnme kllpsyrhti
      841 tvsclkairv lqknghvpsd palfksyaey ghfvdvriaa leavvdytkv drsyeelqwl
      901 lsmvqsdpvp yirhkildml tknppftknm esplcnealv dqlwklmnsg tshdwrlrcg
      961 avdlyftlfg lsrpsclplp elglvlnlke kkavlnptii pesvannqep vnssnnhgqp
     1021 vgfqnteddh liketassis ghqqgvkrka dmplgsplep gqilekneds kvklkirfsn
     1081 sqeeeeidmd tvhdsqafiy hhlnmlerps tpgkeqssge inmhpvsaap lsvfskesns
     1141 skhsdhhhhh hhehkkkkkk hkhkhkhkhk hdtkekekdp fvfsnspasa rsirspslsd
//
LOCUS       XP_041326644            1199 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription initiation factor TFIID subunit 2 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326644
VERSION     XP_041326644.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470710.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1199
                     /product="transcription initiation factor TFIID subunit 2
                     isoform X2"
                     /calculated_mol_wt=137357
     Region          18..512
                     /region_name="M1_like_TAF2"
                     /note="TATA binding protein (TBP) associated factor 2;
                     cd09839"
                     /db_xref="CDD:341074"
     Site            order(146,169,174,177,301,304,324..326,378..379,382..383,
                     385..386,388..389,392,421,510)
                     /site_type="other"
                     /note="intramolecular interface [polypeptide binding]"
                     /db_xref="CDD:341074"
     Site            order(456..457,460,464,468,495)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:341074"
     CDS             1..1199
                     /gene="TAF2"
                     /coded_by="XM_041470710.1:73..3672"
                     /db_xref="GeneID:121355349"
ORIGIN      
        1 mnrkkgdkgf esprpyklth qvvcinninf qrksvvgyve ltifptvanl nriklnskqc
       61 riyrvrvndl eaafiyndpt levchheskq nlnyfsnaya aavsavdpda gngelcikvp
      121 selwkhvdel kvlkvhinfs ldqpkgglhf vvpnmegnma ergahvfscg yqnstrfwfp
      181 cvdsyselct wkleytvdaa mvavsngdlv etvythdmrk ktfhymltip taasnislai
      241 gpfeilvdpy mhevthfclp qllpllkhtt sylhevfefy eeiltcrypy scfktvfide
      301 ayvevaayas msifstnllh samiidetpl trrclaqala qqffgcfisr mswsdewvlk
      361 gisgyiyglw mkktfgvney rhwikqeldq ivayelktgg vllhpifggg kekdnpashl
      421 hfsikhphtl sweyytmfqc kahlvmrlie nrismefmlq vfnkllslas tassqkfqsh
      481 mwsqmlvsts gflksisnvs gkdiqplikq wvdqsgvvkf ygsfafnrkr nvleleikqd
      541 ytspgtqkyv gplkvtvqel dgsfnhtlqi eenslkhdip chsksrrnkk kkiplmngee
      601 vdmdlsamda dspllwirid pdmsvlrkve feqsdfmwqy qlryerdvva qeeailalek
      661 fptpasrlal tdileqeqcf yrvrmlacfc lakiansmvs twtgppamks lftrmfcckt
      721 cpnivktnnf mnfqsyflqk tmpvamallr dvhnlcpkev lmfildliky ndnrknkfsd
      781 nyyraelida lansvtpavs vnnevrtldn lnpdvrlile eitrflnmek llpsyrhtit
      841 vsclkairvl qknghvpsdp alfksyaeyg hfvdvriaal eavvdytkvd rsyeelqwll
      901 smvqsdpvpy irhkildmlt knppftknme splcnealvd qlwklmnsgt shdwrlrcga
      961 vdlyftlfgl srpsclplpe lglvlnlkek kavlnptiip esvannqepv nssnnhgqpv
     1021 gfqnteddhl iketassisg hqqgvkrkad mplgsplepg qileknedsk vklkirfsns
     1081 qeeeeidmdt vhdsqafiyh hlnmlerpst pgkeqssgei nmhpvsaapl svfskesnss
     1141 khsdhhhhhh hehkkkkkkh khkhkhkhkh dtkekekdpf vfsnspasar sirspslsd
//
LOCUS       XP_041326645            1149 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription initiation factor TFIID subunit 2 isoform X3
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326645
VERSION     XP_041326645.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470711.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1149
                     /product="transcription initiation factor TFIID subunit 2
                     isoform X3"
                     /calculated_mol_wt=131879
     Region          18..513
                     /region_name="M1_like_TAF2"
                     /note="TATA binding protein (TBP) associated factor 2;
                     cd09839"
                     /db_xref="CDD:341074"
     Site            order(147,170,175,178,302,305,325..327,379..380,383..384,
                     386..387,389..390,393,422,511)
                     /site_type="other"
                     /note="intramolecular interface [polypeptide binding]"
                     /db_xref="CDD:341074"
     Site            order(457..458,461,465,469,496)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:341074"
     CDS             1..1149
                     /gene="TAF2"
                     /coded_by="XM_041470711.1:73..3522"
                     /db_xref="GeneID:121355349"
ORIGIN      
        1 mnrkkgdkgf esprpyklth qvvcinninf qrksvvgyve ltifptvanl nriklnskqc
       61 riyrvrvndl eaafiyndpt levchheskq rnlnyfsnay aaavsavdpd agngelcikv
      121 pselwkhvde lkvlkvhinf sldqpkgglh fvvpnmegnm aergahvfsc gyqnstrfwf
      181 pcvdsyselc twkleytvda amvavsngdl vetvythdmr kktfhymlti ptaasnisla
      241 igpfeilvdp ymhevthfcl pqllpllkht tsylhevfef yeeiltcryp yscfktvfid
      301 eayvevaaya smsifstnll hsamiidetp ltrrclaqal aqqffgcfis rmswsdewvl
      361 kgisgyiygl wmkktfgvne yrhwikqeld qivayelktg gvllhpifgg gkekdnpash
      421 lhfsikhpht lsweyytmfq ckahlvmrli enrismefml qvfnkllsla stassqkfqs
      481 hmwsqmlvst sgflksisnv sgkdiqplik qwvdqsgvvk fygsfafnrk rnvleleikq
      541 dytspgtqky vgplkvtvqe ldgsfnhtlq ieenslkhdi pchsksrrnk kkkiplmnge
      601 evdmdlsamd adspllwiri dpdmsvlrkv efeqsdfmwq yqlryerdvv aqeeailale
      661 kfptpasrla ltdileqeqc fyrvrmlacf clakiansmv stwtgppamk slftrmfcck
      721 tcpnivktnn fmnfqsyflq ktmpvamall rdvhnlcpke vlmfildlik yndnrknkfs
      781 dnyyraelid alansvtpav svnnevrtld nlnpdvrlil eeitrflnme kllpsyrhti
      841 tvsclkairv lqknghvpsd palfksyaey ghfvdvriaa leavvdytkv drsyeelqwl
      901 lsmvqsdpvp yirhkildml tknppftknm esplcnealv dqlwklmnsg tshdwrlrcg
      961 avdlyftlfg lsrpsclplp elglvlnlke kkavlnptii pesvannqep vnssnnhgqp
     1021 vgfqntfsns qeeeeidmdt vhdsqafiyh hlnmlerpst pgkeqssgei nmhpvsaapl
     1081 svfskesnss khsdhhhhhh hehkkkkkkh khkhkhkhkh dtkekekdpf vfsnspasar
     1141 sirspslsd
//
LOCUS       XP_041326647             587 aa            linear   VRT 06-MAY-2021
DEFINITION  nudC domain-containing protein 1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326647
VERSION     XP_041326647.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470713.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..587
                     /product="nudC domain-containing protein 1 isoform X1"
                     /calculated_mol_wt=66247
     Region          281..365
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..587
                     /gene="NUDCD1"
                     /coded_by="XM_041470713.1:91..1854"
                     /db_xref="GeneID:121355350"
ORIGIN      
        1 magaahcslq akrllldpkf egyklslepl acyqlgldaa vaevqlrddq ytldhmrafg
       61 mynylhldsw yqdnvyyvdq fgrvmnlsvt ldtalqkpre vfrlptdlta cdnrlcasmh
      121 fssstwvtls dgtgrlylik sgkrgssase kweivfneel gspfivahsv sfvksdahsl
      181 avlllrvekd eldtkgsgfh vtlewvtiae gkegdhryei ikrrvlqgks vphyaaieps
      241 gdglmivshk pftfmqtesd kleenddakv snekkvvdpl yswqqteddv tvtvrlpqdi
      301 trddikicfs pdnicvtlkd qpplmegkly ssvdhesctw iiredkslei slikknegcr
      361 waeliigdtr gefimdpsqc seiaeslmhl tsevmnpnpe kekppcnaqe leecdafled
      421 gaslcrfdgd tlkithiinl gsnqylfsvv vnpkempcfc lrhdvdallw qphsdqpenm
      481 wehiatfnal gyvqaskqdk kfmacapdys yaalceclrr vfiyrqptpl atvlynrkeg
      541 rqvgqvakql vatleasdpi lgfqatserl fvlttktlfl ikvnsgn
//
LOCUS       XP_041326648             585 aa            linear   VRT 06-MAY-2021
DEFINITION  nudC domain-containing protein 1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326648
VERSION     XP_041326648.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470714.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..585
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..585
                     /product="nudC domain-containing protein 1 isoform X2"
                     /calculated_mol_wt=66048
     Region          279..363
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..585
                     /gene="NUDCD1"
                     /coded_by="XM_041470714.1:90..1847"
                     /db_xref="GeneID:121355350"
ORIGIN      
        1 magaahcslq akrllldpkf egyklslepl acyqlgldaa vaevqlrddq ytldhmrafg
       61 mynylhldsw yqdnvyyvdq fgrvmnlsvt ldtalqkpre vfrlptdlta cdnrlcasmh
      121 fssstwvtls dgtgrlylik sgkrgssase kweivfneel gspfivahsv sfvksdahsl
      181 avlllrvekd eldtkgsgfh vtlewvtiae gkegdhryei ikrrvlqgks vphyaaieps
      241 gdglmivshk pftfmqtesd kleenddakv snekkdplys wqqteddvtv tvrlpqditr
      301 ddikicfspd nicvtlkdqp plmegklyss vdhesctwii redksleisl ikknegcrwa
      361 eliigdtrge fimdpsqcse iaeslmhlts evmnpnpeke kppcnaqele ecdafledga
      421 slcrfdgdtl kithiinlgs nqylfsvvvn pkempcfclr hdvdallwqp hsdqpenmwe
      481 hiatfnalgy vqaskqdkkf macapdysya alceclrrvf iyrqptplat vlynrkegrq
      541 vgqvakqlva tleasdpilg fqatserlfv lttktlflik vnsgn
//
LOCUS       XP_041326649             556 aa            linear   VRT 06-MAY-2021
DEFINITION  nudC domain-containing protein 1 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326649
VERSION     XP_041326649.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470715.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..556
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..556
                     /product="nudC domain-containing protein 1 isoform X3"
                     /calculated_mol_wt=63142
     Region          250..334
                     /region_name="alpha-crystallin domain (ACD) found in
                     alpha-crystallin-type small heat shock proteins, and a
                     similar domain found in p23 (a cochaperone for Hsp90) and
                     in other p23-like proteins."
                     /note="The alpha-crystallin-Hsps_p23-like superfamily
                     includes the alpha-crystallin domain (ACD) of
                     alpha-crystallin-type small heat shock proteins (sHsps)
                     and a similar domain found in p23-like proteins. sHsps are
                     small stress induced proteins with monomeric...; cl00175"
                     /db_xref="CDD:469641"
     CDS             1..556
                     /gene="NUDCD1"
                     /coded_by="XM_041470715.1:919..2589"
                     /db_xref="GeneID:121355350"
ORIGIN      
        1 mrrkekqrav aevqlrddqy tldhmrafgm ynylhldswy qdnvyyvdqf grvmnlsvtl
       61 dtalqkprev frlptdltac dnrlcasmhf ssstwvtlsd gtgrlyliks gkrgssasek
      121 weivfneelg spfivahsvs fvksdahsla vlllrvekde ldtkgsgfhv tlewvtiaeg
      181 kegdhryeii krrvlqgksv phyaaiepsg dglmivshkp ftfmqtesdk leenddakvs
      241 nekkvvdply swqqteddvt vtvrlpqdit rddikicfsp dnicvtlkdq pplmegklys
      301 svdhesctwi iredksleis likknegcrw aeliigdtrg efimdpsqcs eiaeslmhlt
      361 sevmnpnpek ekppcnaqel eecdafledg aslcrfdgdt lkithiinlg snqylfsvvv
      421 npkempcfcl rhdvdallwq phsdqpenmw ehiatfnalg yvqaskqdkk fmacapdysy
      481 aalceclrrv fiyrqptpla tvlynrkegr qvgqvakqlv atleasdpil gfqatserlf
      541 vlttktlfli kvnsgn
//
LOCUS       XP_041326650              96 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription and mRNA export factor ENY2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326650
VERSION     XP_041326650.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470716.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="transcription and mRNA export factor ENY2"
                     /calculated_mol_wt=10869
     Region          11..89
                     /region_name="EnY2"
                     /note="Transcription factor e(y)2; pfam10163"
                     /db_xref="CDD:462972"
     CDS             1..96
                     /gene="ENY2"
                     /coded_by="XM_041470716.1:135..425"
                     /db_xref="GeneID:121355351"
ORIGIN      
        1 mnkdaqmrat inqklietge rerlkellra kliecgwkdq lkahckdvik ekglehvtvd
       61 dlvaeitpkg ralvpdsvkk ellqrirtfl aqhasl
//
LOCUS       XP_041326651              96 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription and mRNA export factor ENY2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326651
VERSION     XP_041326651.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470717.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="transcription and mRNA export factor ENY2"
                     /calculated_mol_wt=10869
     Region          11..89
                     /region_name="EnY2"
                     /note="Transcription factor e(y)2; pfam10163"
                     /db_xref="CDD:462972"
     CDS             1..96
                     /gene="ENY2"
                     /coded_by="XM_041470717.1:83..373"
                     /db_xref="GeneID:121355351"
ORIGIN      
        1 mnkdaqmrat inqklietge rerlkellra kliecgwkdq lkahckdvik ekglehvtvd
       61 dlvaeitpkg ralvpdsvkk ellqrirtfl aqhasl
//
LOCUS       XP_041326652              96 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription and mRNA export factor ENY2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326652
VERSION     XP_041326652.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470718.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="transcription and mRNA export factor ENY2"
                     /calculated_mol_wt=10869
     Region          11..89
                     /region_name="EnY2"
                     /note="Transcription factor e(y)2; pfam10163"
                     /db_xref="CDD:462972"
     CDS             1..96
                     /gene="ENY2"
                     /coded_by="XM_041470718.1:49..339"
                     /db_xref="GeneID:121355351"
ORIGIN      
        1 mnkdaqmrat inqklietge rerlkellra kliecgwkdq lkahckdvik ekglehvtvd
       61 dlvaeitpkg ralvpdsvkk ellqrirtfl aqhasl
//
LOCUS       XP_041326653              96 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription and mRNA export factor ENY2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326653
VERSION     XP_041326653.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470719.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..96
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..96
                     /product="transcription and mRNA export factor ENY2"
                     /calculated_mol_wt=10869
     Region          11..89
                     /region_name="EnY2"
                     /note="Transcription factor e(y)2; pfam10163"
                     /db_xref="CDD:462972"
     CDS             1..96
                     /gene="ENY2"
                     /coded_by="XM_041470719.1:215..505"
                     /db_xref="GeneID:121355351"
ORIGIN      
        1 mnkdaqmrat inqklietge rerlkellra kliecgwkdq lkahckdvik ekglehvtvd
       61 dlvaeitpkg ralvpdsvkk ellqrirtfl aqhasl
//
LOCUS       XP_041326654             631 aa            linear   VRT 06-MAY-2021
DEFINITION  double-strand-break repair protein rad21 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326654
VERSION     XP_041326654.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470720.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="double-strand-break repair protein rad21
                     homolog"
                     /calculated_mol_wt=71684
     Region          1..104
                     /region_name="Rad21_Rec8_N"
                     /note="N terminus of Rad21 / Rec8 like protein; pfam04825"
                     /db_xref="CDD:461446"
     Region          315..394
                     /region_name="Rad21_Rec8_M_NXP1-like"
                     /note="Middle HEAT-repeat binding domain found in Homo
                     sapiens nuclear matrix protein 1 (NXP-1) and similar
                     proteins; cd21792"
                     /db_xref="CDD:439294"
     Site            order(321..323,326..333,336,339..340,342..343,345..352,
                     354..360,362..364,367..368,371..381,383..384,387..388,
                     390..394)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:439294"
     Region          574..628
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..631
                     /gene="RAD21"
                     /coded_by="XM_041470720.1:280..2175"
                     /db_xref="GeneID:121355352"
ORIGIN      
        1 mfyahfvlsk rgplakiwla ahwdkkltka hvfecnless vesiispkvk malrtsghll
       61 lgvvriyhrk akylladcne afikikmafr pgvvdlpeen reaaynaitl peefhdfdqp
      121 lpdlddidva qqfslnqsrv eeitmreevg nisilqdndf gdfgmddrem mregsafedd
      181 mlvstsasnl llepeqstsh lneksnhley edqykddnfg egndggildd kllsnndggi
      241 fddppalses gvmmpeqpph ddmddddnvs mggpdspdsv dpveplptmt dqttlvpnee
      301 eafalepidi tvketkakrk rklivdsvke ldsktiraql sdysdivttl dlapptkklm
      361 mwketggvek lfslpaqplw nnrllklftr cltplvpedl rkrrkggead nldeflkdfe
      421 npevpreeqq qqqqqrdvid epileepsrl qesmmegsrt nldesvmppp paqtgvkrkl
      481 qqvepepvlp hppsqqleip pvemppeepq nicqlipele llpekekeke kekeeeeeee
      541 eedgtggdqd qeerrwnkrt qqmlhglqra laktgaesis llelcrntnr kqaaakfysf
      601 lvlkkqqaie ltqeepysdi iatpgprfhi i
//
LOCUS       XP_041326655             631 aa            linear   VRT 06-MAY-2021
DEFINITION  double-strand-break repair protein rad21 homolog [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326655
VERSION     XP_041326655.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470721.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..631
                     /product="double-strand-break repair protein rad21
                     homolog"
                     /calculated_mol_wt=71684
     Region          1..104
                     /region_name="Rad21_Rec8_N"
                     /note="N terminus of Rad21 / Rec8 like protein; pfam04825"
                     /db_xref="CDD:461446"
     Region          315..394
                     /region_name="Rad21_Rec8_M_NXP1-like"
                     /note="Middle HEAT-repeat binding domain found in Homo
                     sapiens nuclear matrix protein 1 (NXP-1) and similar
                     proteins; cd21792"
                     /db_xref="CDD:439294"
     Site            order(321..323,326..333,336,339..340,342..343,345..352,
                     354..360,362..364,367..368,371..381,383..384,387..388,
                     390..394)
                     /site_type="other"
                     /note="heterodimer interface [polypeptide binding]"
                     /db_xref="CDD:439294"
     Region          574..628
                     /region_name="Rad21_Rec8"
                     /note="Conserved region of Rad21 / Rec8 like protein;
                     pfam04824"
                     /db_xref="CDD:335912"
     CDS             1..631
                     /gene="RAD21"
                     /coded_by="XM_041470721.1:49..1944"
                     /db_xref="GeneID:121355352"
ORIGIN      
        1 mfyahfvlsk rgplakiwla ahwdkkltka hvfecnless vesiispkvk malrtsghll
       61 lgvvriyhrk akylladcne afikikmafr pgvvdlpeen reaaynaitl peefhdfdqp
      121 lpdlddidva qqfslnqsrv eeitmreevg nisilqdndf gdfgmddrem mregsafedd
      181 mlvstsasnl llepeqstsh lneksnhley edqykddnfg egndggildd kllsnndggi
      241 fddppalses gvmmpeqpph ddmddddnvs mggpdspdsv dpveplptmt dqttlvpnee
      301 eafalepidi tvketkakrk rklivdsvke ldsktiraql sdysdivttl dlapptkklm
      361 mwketggvek lfslpaqplw nnrllklftr cltplvpedl rkrrkggead nldeflkdfe
      421 npevpreeqq qqqqqrdvid epileepsrl qesmmegsrt nldesvmppp paqtgvkrkl
      481 qqvepepvlp hppsqqleip pvemppeepq nicqlipele llpekekeke kekeeeeeee
      541 eedgtggdqd qeerrwnkrt qqmlhglqra laktgaesis llelcrntnr kqaaakfysf
      601 lvlkkqqaie ltqeepysdi iatpgprfhi i
//
LOCUS       XP_041326657            1126 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 31 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326657
VERSION     XP_041326657.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470723.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1126
                     /product="TBC1 domain family member 31 isoform X1"
                     /calculated_mol_wt=129668
     Region          115..152
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <119..411
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          157..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          332..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          380..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          499..690
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; cl46302"
                     /db_xref="CDD:480642"
     Region          <758..>1029
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1126
                     /gene="TBC1D31"
                     /coded_by="XM_041470723.1:78..3458"
                     /db_xref="GeneID:121355353"
ORIGIN      
        1 mparktttps sprgsswscs ilrylggsar hssgssplvk reravprgwr tparsvggal
       61 raarerrrra gmercdlger rrgpiwtrra gaaaargviv nivhsvqgyh sktihflnva
      121 fdssgdslla gdrqgniyvf dlngnrfnlv qrtmqactal afnlrrktef lvaladysik
      181 cfdtgnqelv swmrghessv ssisvhgsgk yaittstdta qlwdldtfqr irklnvrqsv
      241 giqkvfflpl sntilscfkd nsvfawefdt lhckyqlsap vegsvlfykv favtrdgrtl
      301 vaggksnhlh lwclelkqli riiqmpekvr avrhleflpd sfdggsnqvl gvlsqdnimr
      361 finietckll fdigspeegi stavispngr yiasvmengs lnlysvqalt qegnkpppfm
      421 fkvvedgpky tseanklitk vtsgrskrpw kskqskiqsr llklqantsl enkenelpgg
      481 lnknrlqall kgfgeypaky rmfvwrsllq lpenhlafss lidrgihsaf vniqkeypik
      541 sgkllrvlqr tlsalahwsa ifaetpympl lafpfvklfq nnqlicfevv atvvvnfcqh
      601 wfeyfpnppv nvlgmmenvl ahhdkellqh likynvtsqv yawplletll sevltreewl
      661 kafdnifsnh psyflmivia yvicsrasll hcnqaadfey ffhhrnnvdi nvvikeayhl
      721 meatpleihp qhmlddftpl tkgqypvfnk yptfivnyqa qkwekirqde ieylrerqla
      781 heseakaqeq kaedetwyrk qkllqeaeeq rqkilveeek laeqrqrlav vkrelkvkel
      841 qlldasrrrf lnyqqdqvqm elkhlndeia rkhlikdqev vtkemkeeve ahrrkmdled
      901 qrvqrlieid keiqkihtva eenlarteqk htdtngrlhp qrrlrhddqd rvkhyreivk
      961 llhdnrvkea ellkamrete skkqedvvqn kaqlgkeqka aaadghrkqf lddkmndele
     1021 laeklqredg cferlrdvka rctergvevq qrprsgsicl ndlstlassp hknvfasrgg
     1081 aarrraelar qerelmaevw rlrrrltsra qarhpparsp attwsp
//
LOCUS       XP_041326658            1116 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 31 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326658
VERSION     XP_041326658.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470724.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1116
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1116
                     /product="TBC1 domain family member 31 isoform X2"
                     /calculated_mol_wt=128710
     Region          115..152
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <119..411
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          157..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          332..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          380..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          499..690
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; cl46302"
                     /db_xref="CDD:480642"
     Region          <758..>1029
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1116
                     /gene="TBC1D31"
                     /coded_by="XM_041470724.1:78..3428"
                     /db_xref="GeneID:121355353"
ORIGIN      
        1 mparktttps sprgsswscs ilrylggsar hssgssplvk reravprgwr tparsvggal
       61 raarerrrra gmercdlger rrgpiwtrra gaaaargviv nivhsvqgyh sktihflnva
      121 fdssgdslla gdrqgniyvf dlngnrfnlv qrtmqactal afnlrrktef lvaladysik
      181 cfdtgnqelv swmrghessv ssisvhgsgk yaittstdta qlwdldtfqr irklnvrqsv
      241 giqkvfflpl sntilscfkd nsvfawefdt lhckyqlsap vegsvlfykv favtrdgrtl
      301 vaggksnhlh lwclelkqli riiqmpekvr avrhleflpd sfdggsnqvl gvlsqdnimr
      361 finietckll fdigspeegi stavispngr yiasvmengs lnlysvqalt qegnkpppfm
      421 fkvvedgpky tseanklitk vtsgrskrpw kskqskiqsr llklqantsl enkenelpgg
      481 lnknrlqall kgfgeypaky rmfvwrsllq lpenhlafss lidrgihsaf vniqkeypik
      541 sgkllrvlqr tlsalahwsa ifaetpympl lafpfvklfq nnqlicfevv atvvvnfcqh
      601 wfeyfpnppv nvlgmmenvl ahhdkellqh likynvtsqv yawplletll sevltreewl
      661 kafdnifsnh psyflmivia yvicsrasll hcnqaadfey ffhhrnnvdi nvvikeayhl
      721 meatpleihp qhmlddftpl tkgqypvfnk yptfivnyqa qkwekirqde ieylrerqla
      781 heseakaqeq kaedetwyrk qkllqeaeeq rqkilveeek laeqrqrlav vkrelkvkel
      841 qlldasrrrf lnyqqdqvqm elkhlndeia rkhlikdqev vtkemkeeve ahrrkmdled
      901 qrvqrlieid keiqkihtva eenlarteqk htdtngrlhp qrrlrhddqd rvkhyreivk
      961 llhdnrvkea ellkamrete skkqedvvqn kaqlgkeqka aaadghrkqf lddkmndele
     1021 laeklqredg cferlrdvka rctergvevq qrprsgsicl ndlstlassp htrrraelar
     1081 qerelmaevw rlrrrltsra qarhpparsp attwsp
//
LOCUS       XP_041326659            1080 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 31 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326659
VERSION     XP_041326659.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470725.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1080
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1080
                     /product="TBC1 domain family member 31 isoform X3"
                     /calculated_mol_wt=124019
     Region          115..152
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <119..411
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          157..194
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          201..235
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          242..278
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          286..324
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          332..362
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          380..406
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          499..690
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; cl46302"
                     /db_xref="CDD:480642"
     Region          <756..>1006
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..1080
                     /gene="TBC1D31"
                     /coded_by="XM_041470725.1:78..3320"
                     /db_xref="GeneID:121355353"
ORIGIN      
        1 mparktttps sprgsswscs ilrylggsar hssgssplvk reravprgwr tparsvggal
       61 raarerrrra gmercdlger rrgpiwtrra gaaaargviv nivhsvqgyh sktihflnva
      121 fdssgdslla gdrqgniyvf dlngnrfnlv qrtmqactal afnlrrktef lvaladysik
      181 cfdtgnqelv swmrghessv ssisvhgsgk yaittstdta qlwdldtfqr irklnvrqsv
      241 giqkvfflpl sntilscfkd nsvfawefdt lhckyqlsap vegsvlfykv favtrdgrtl
      301 vaggksnhlh lwclelkqli riiqmpekvr avrhleflpd sfdggsnqvl gvlsqdnimr
      361 finietckll fdigspeegi stavispngr yiasvmengs lnlysvqalt qegnkpppfm
      421 fkvvedgpky tseanklitk vtsgrskrpw kskqskiqsr llklqantsl enkenelpgg
      481 lnknrlqall kgfgeypaky rmfvwrsllq lpenhlafss lidrgihsaf vniqkeypik
      541 sgkllrvlqr tlsalahwsa ifaetpympl lafpfvklfq nnqlicfevv atvvvnfcqh
      601 wfeyfpnppv nvlgmmenvl ahhdkellqh likynvtsqv yawplletll sevltreewl
      661 kafdnifsnh psyflmivia yvicsrasll hcnqaadfey ffhhrnnvdi nvvikeayhl
      721 meatpleihp qhmlddftpl tkgqypvfnk yptfivnyqa qkwekirqde ieylrerqla
      781 heseakaqeq kaedetwyrk qkllqeaeeq rqkilveeek laeqrqrlav vkrelkvkel
      841 qlldasrrrf lnyqqdqvqm elkhlndeia rkvaeenlar teqkhtdtng rlhpqrrlrh
      901 ddqdrvkhyr eivkllhdnr vkeaellkam reteskkqed vvqnkaqlgk eqkaaaadgh
      961 rkqflddkmn delelaeklq redgcferlr dvkarcterg vevqqrprsg siclndlstl
     1021 assphknvfa srggaarrra elarqerelm aevwrlrrrl tsraqarhpp arspattwsp
//
LOCUS       XP_041326660             973 aa            linear   VRT 06-MAY-2021
DEFINITION  TBC1 domain family member 31 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326660
VERSION     XP_041326660.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470726.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..973
                     /product="TBC1 domain family member 31 isoform X4"
                     /calculated_mol_wt=112858
     Region          4..42
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          <5..258
                     /region_name="WD40"
                     /note="WD40 repeat [General function prediction only];
                     COG2319"
                     /db_xref="CDD:441893"
     Region          48..83
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          89..129
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          138..171
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          179..219
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          227..253
                     /region_name="WD40 repeat"
                     /note="WD40 repeat [structural motif]"
                     /db_xref="CDD:293791"
     Region          346..537
                     /region_name="RabGAP-TBC"
                     /note="Rab-GTPase-TBC domain; cl46302"
                     /db_xref="CDD:480642"
     Region          <605..>873
                     /region_name="Smc"
                     /note="Chromosome segregation ATPase Smc [Cell cycle
                     control, cell division, chromosome partitioning]; COG1196"
                     /db_xref="CDD:440809"
     CDS             1..973
                     /gene="TBC1D31"
                     /coded_by="XM_041470726.1:303..3224"
                     /db_xref="GeneID:121355353"
ORIGIN      
        1 mqactalafn lrrkteflva ladysikcfd tgnqelvswm rghessvssi svhgsgkyai
       61 ttstdtaqlw dldtfqrirk lnvrqsvgiq kvfflplsnt ilscfkdnsv fawefdtlhc
      121 kyqlsapveg svlfykvfav trdgrtlvag gksnhlhlwc lelkqlirii qmpekvravr
      181 hleflpdsfd ggsnqvlgvl sqdnimrfin ietckllfdi gspeegista vispngryia
      241 svmengslnl ysvqaltqeg nkpppfmfkv vedgpkytse anklitkvts grskrpwksk
      301 qskiqsrllk lqantslenk enelpgglnk nrlqallkgf geypakyrmf vwrsllqlpe
      361 nhlafsslid rgihsafvni qkeypiksgk llrvlqrtls alahwsaifa etpympllaf
      421 pfvklfqnnq licfevvatv vvnfcqhwfe yfpnppvnvl gmmenvlahh dkellqhlik
      481 ynvtsqvyaw plletllsev ltreewlkaf dnifsnhpsy flmiviayvi csrasllhcn
      541 qaadfeyffh hrnnvdinvv ikeayhlmea tpleihpqhm lddftpltkg qypvfnkypt
      601 fivnyqaqkw ekirqdeiey lrerqlahes eakaqeqkae detwyrkqkl lqeaeeqrqk
      661 ilveeeklae qrqrlavvkr elkvkelqll dasrrrflny qqdqvqmelk hlndeiarkh
      721 likdqevvtk emkeeveahr rkmdledqrv qrlieidkei qkihtvaeen larteqkhtd
      781 tngrlhpqrr lrhddqdrvk hyreivkllh dnrvkeaell kamreteskk qedvvqnkaq
      841 lgkeqkaaaa dghrkqfldd kmndelelae klqredgcfe rlrdvkarct ergvevqqrp
      901 rsgsiclndl stlassphkn vfasrggaar rraelarqer elmaevwrlr rrltsraqar
      961 hpparspatt wsp
//
LOCUS       XP_041326661             833 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc fingers and homeoboxes protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326661
VERSION     XP_041326661.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470727.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..833
                     /product="zinc fingers and homeoboxes protein 2"
                     /calculated_mol_wt=92074
     Region          103..155
                     /region_name="zf_C2H2_ZHX"
                     /note="Zinc-fingers and homeoboxes C2H2 finger domain;
                     pfam18387"
                     /db_xref="CDD:465737"
     Region          273..322
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          442..494
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(443,483,486..487,490)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          535..580
                     /region_name="HOX"
                     /note="Homeodomain; smart00389"
                     /db_xref="CDD:197696"
     Region          632..682
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(632,672,675..676,679)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     CDS             1..833
                     /gene="ZHX2"
                     /coded_by="XM_041470727.1:439..2940"
                     /db_xref="GeneID:121355354"
ORIGIN      
        1 maskrksttp cmvrtsevve qegaegveap kdkgtgalqq dskktwpsen svkdcevvea
       61 kppgenqskk pqggyeckyc pystqnlnef tehvdtqhpn vilnplyvca ecnfttkkyd
      121 slsdhntkyh pgetnfklkl ikrnnqtvle qsieaatndv tvtssglena ecddslhggv
      181 sankapvmkl gkpkgetkkg skkpeeggte nhmdgalpri iteateaiac ingdllhdvl
      241 ahvmpsvqlp pninlvpkvp vplnstkyns aldtnatmin sfnkfpyptq aelswltaas
      301 khpeeqiriw fatqrlkhgi swspeeveea rkkmfngtiq avpqtitvlp aplatakmpq
      361 piiqtalpcq ilgqtglvlt pvsngstvsc spitlavapn qgqkrtiqtl ssapeakrph
      421 ivqvpeipak msavpatpas erkktkeqia elkasfmasq fpddaevyrl ieatglsrse
      481 ikkwfsdhry rsqrgivqip gdalgkdqia psagrhgrsf hpytdftpqr fkektqeqlr
      541 aleesflkcs fptqgeldrl rvetklsrre idswfserrk irdsmeqavl dsmgsyrkik
      601 dqgtpngais qaellgssql pgalsgsstt lkktqeqihl lkstfartqw pspqeydqla
      661 sqtgltrtei vrwfkenrss lrtgslkwid qyqqqyagdg hnkqsqkrss khtespkngn
      721 evsrqhyqeh kklneenggk pvvrakrdce plkdsllgnq aegadrlecn nshdghgsee
      781 neepaevnwv evtvgeddaa sdcmdswsqt apeghtelpd ldsesisgdn shv
//
LOCUS       XP_041326662             251 aa            linear   VRT 06-MAY-2021
DEFINITION  derlin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326662
VERSION     XP_041326662.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470728.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..251
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..251
                     /product="derlin-1"
                     /calculated_mol_wt=28724
     Region          11..204
                     /region_name="DER1"
                     /note="Der1-like family; pfam04511"
                     /db_xref="CDD:427988"
     CDS             1..251
                     /gene="DERL1"
                     /coded_by="XM_041470728.1:159..914"
                     /db_xref="GeneID:121355355"
ORIGIN      
        1 msdlgdwfrs iplitrywfa gsiavplvgk lglvspvnlf lwpdafihrf qiwrpitatf
       61 ffpvgpgtgf lylvnlyfly qyssrletga fdgrpadymf mllfnwiciv itglvmdmql
      121 lmiplimsvl yvwaqlnrdm ivsfwfgtrf kacylpwvil gfnyiiggsv inelignlvg
      181 hlyfflmfky pmdlggrnfl stpqflyrwl pnrrggvsgf gvppasmrra aedqqgggrh
      241 nwgqgfrlgd q
//
LOCUS       XP_041326663             741 aa            linear   VRT 06-MAY-2021
DEFINITION  exostosin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326663
VERSION     XP_041326663.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470729.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..741
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..741
                     /product="exostosin-1"
                     /calculated_mol_wt=84906
     Region          105..391
                     /region_name="Exostosin"
                     /note="Exostosin family; pfam03016"
                     /db_xref="CDD:397245"
     Region          475..720
                     /region_name="Glyco_transf_64"
                     /note="Glycosyl transferase family 64 domain; pfam09258"
                     /db_xref="CDD:430488"
     CDS             1..741
                     /gene="EXT1"
                     /coded_by="XM_041470729.1:260..2485"
                     /db_xref="GeneID:121355356"
ORIGIN      
        1 mqakkryltl lsagtclall lylggvrlra arhpppgsrh gprpggaerp wprfpdalrp
       61 fapaerpgpe gggrvsprqr rdasaglyrg rrcrmescfd faqcrkngfk vyvypqqkge
      121 kiaesyqnvl aaiegsrfyt sdpgqaclfv lsldtldrdq lspqyvhnlr skvqslhlwn
      181 ngrnhlifnl ysgtwpdyte dvgfdigqam lakasisten frpnfdvsip lfskdhprtg
      241 gekgflrfnt ipplrkymlv fkgkryltgi gsdtrnalyh vhngedvvll ttckhgkdwq
      301 khkdsrcdrd naeyekydyr emlhnatfcl vprgrrlgsf rflealqaac vpvmlsngwe
      361 lpfsevidwn qaaiigderl llqipstirs ihqdkilalr qqtqflweay fssvekivlt
      421 tleiiqdrif khisrnsliw nkhpgglfvl pqyssylgdf pyyyanlglk plstftavih
      481 avtplvsqsq pvlkllvava ksqycaqiiv lwncdkplpa khrwpatsvp viviegeskv
      541 mssrflpydn ivtdavlsld edtvlsttev dfaftvwqsf perivgypar shfwdntker
      601 wgytskwtnd ysmvltgaai yhkyyhylyt hylpaslknm vdqlancedi lmnflvsavt
      661 klppikvtqk kqyketmmgq tsrasrwadp dhfaqrqscm ntfaswfgym plihsqmrld
      721 pvlfkdqvsi lrkkyrdier l
//
LOCUS       XP_041326664            3705 aa            linear   VRT 06-MAY-2021
DEFINITION  CUB and sushi domain-containing protein 3 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326664
VERSION     XP_041326664.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470730.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3705
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3705
                     /product="CUB and sushi domain-containing protein 3
                     isoform X1"
                     /calculated_mol_wt=405356
     Region          65..171
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(73,75,77,104,109,143,167,169,171)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          178..236
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(188,205)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          241..343
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(249,251,253,280,285,315,339,341,343)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          484..542
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(494,511)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          546..654
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          662..716
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(672,689)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          719..826
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(729,731,758,763,797,821,823,825..826)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          832..889
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(842,859)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          893..1000
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(901,903,905,932,937,971,995,997,999..1000)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1008..1061
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1018,1035)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1065..1173
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1073,1075,1077,1104,1109,1142,1169,1171,1173)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1180..1236
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1190,1207)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1239..1346
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1247,1249,1251,1278,1283,1317,1341,1343,1345..1346)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1352..1409
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1362,1380)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1412..1520
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1421,1423,1425,1452,1457,1491,1515,1517,1519..1520)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1526..1583
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1536,1553)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1586..1693
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1594,1596,1598,1625,1630,1664,1688,1690,1692..1693)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1699..1756
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(1709,1726)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1760..1867
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1768,1770,1772,1799,1837,1862,1864,1866..1867)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1876..1934
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1886,1903)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1937..2044
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1947,1949,1976,1981,2015,2039,2041,2043..2044)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2050..2105
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2060,2077)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2109..2216
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2117,2119,2121,2148,2153,2187,2211,2213,2215..2216)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2222..2278
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2232,2249)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2281..2387
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2289,2291,2293,2320,2325,2359,2382,2384,2386..2387)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2393..2451
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2403,2422)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2458..2564
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2464,2466,2468,2495,2500,2535,2559,2561,2563..2564)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2567..2625
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(2577,2595)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2625..2869
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2754..2989
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2926..3166
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          3166..3405
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          3409..3465
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(3419,3437)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..3705
                     /gene="CSMD3"
                     /coded_by="XM_041470730.1:1..11118"
                     /db_xref="GeneID:121355357"
ORIGIN      
        1 mkgicrgeir akeskiadfw ergctkcgrl dfilvkkmei ksgftfwnlv fllmvscvkg
       61 fiytcggtlk glngtiespg fpygypngan ctwviiaeer nriqivfqsf aleeeydyls
      121 lydghphpan frtrltgfhl pppvtstksv fslrltsdfa vsahgfkvyy eelqssscgn
      181 pgvppkgily gqrfdvgdki ryscvtgyil dghpqltcia ssvntaswdf pvpicraeda
      241 cggtmrgssg iisspnfpne yhnnadctwt ivaepgdtis liftdfqmee kydyleiegs
      301 epptiglsgm nipppvisnk nwlrlhfvtd snhryrgfsa hyqgssfikt astgeleehi
      361 aattgaitva stsadvavss avttcrqsae eqrvqamnir ksvlesatyk etlslhqanl
      421 rstrrrprna eqiertkela vvthrvkkai dfksrgfklf pgkdnsnkfs ilneggikqa
      481 snlcpdpgep engkrigsdf slgatvqfsc dedyvlqgsk sitcqriaev faawsdhrpv
      541 ckvktcgsnl qgpggtfssp nfpfqydsna qcvwvitain tnkviqinfe efdleigydt
      601 ltigdggevg dpktvlqvlt gsfvpdlivs msnqmwlhlq tdesvgsigf kvnykeieke
      661 scgdpgtply giregdgfsn rdvlrfecqf gfeligeksi icqennqwsa nipicifpcl
      721 snftapmgtv lspdypegyg nnlnciwtii sdpgsrihls fndfdlesqf dflavkdgds
      781 vdspiigtft gaevpshlts nghilrlefq adhsmsgrgf nityntfghn ecpdpgvpin
      841 arrfgdnfql gssisvicee gfiktqgtet itcmlvdgkv mwsgpipkcg apcgghfssp
      901 sgvilspgwp gyykdslnce wvieaepghs ikitferfqt elnydvlevh dgpnllspll
      961 gsyngtqvpq flfsssnfmy llfttdnsrs nngfkihyes vtvntyscld pgipvhgrry
     1021 ghdfsigstv sfscdpgyrl sheepllcek nhwwshplpt cdalcggdvr gpsgtilspg
     1081 ypdlypnsln ctwtvdvthg kgvqftfytf hledhhdyll itengsftqp larltgselp
     1141 spinaglygn fraqlrfisd fsisyegfni sfseynlepc edpgipqfgs rigfnfgvgd
     1201 iltfscssgy rlegasevic lgggrrvwsa plprcvaecg asttnnegil lspnyplnye
     1261 nnheciysiq vqagkginis artfhlaqgd vlkiydgkdn tahllgaytg aslrgltlss
     1321 tsnhlwlefn sdmegtdegf qlvytsfels hcedpgvpqf gykisdqghf agstiiygcn
     1381 pgytlhgssl lkcmtgerra wdyplpscia ecggrfkges sgrilspgyp fpydnnlrcm
     1441 wvievdpgni vslqflafdt eashdilrvw dgppenemll keisgslipe gihstlnivt
     1501 iqfdtdfyis ksgfaiqfss svatacrdpg vpmngtrngd grepgdtvif qcdpgyelqg
     1561 deritciqve nryfwqpnpp vciapcggnl tgssgfilsp nfphpyphsr dcdwtinvns
     1621 dyvislafis fsiepnydfl yiydgpdsns pligsfqdsk lperiesssn tmhlafrsdg
     1681 svsftgfhle ykaklrescf dpgnimngtr lgmdyklgst vtyycdagyv lqgystltci
     1741 mgddgrpgwn ralpschapc gsrstgsegt vlspnypkny svghnciysi tvpkefvvfg
     1801 qfvffqtslh dvvevydgpa lqssllssls gshsgeslpl ssgnqitvrf tsvgpvtakg
     1861 fhfvyqavpr tsatqcssvp eprfgkrign efavgslvlf ecnpgyilhg staircdtvp
     1921 nalaqwndsl ptcivpcggi ltkrkgtils pgypepydnn lncvwkitvp egagiqvqvv
     1981 sfatehnwds ldfydgadnn aprlgsysgt tippllnsts nnlylnfqsd isvsaagfhl
     2041 eytaigldsc pepqtpsngi kigdrymvgd vvsfqcdqgy slqghsyitc mpgpvrrwny
     2101 pipiclaqcg ggmsdfsgvi lspgfpgnyp ssldctwtik lpigfgvhlq flnfstetih
     2161 dylevrsgst etstvigrls gpqlpaslfs tthetslyfh sdysqnkqgf hivyqayqlq
     2221 scpdprpfrn gfvvgndftv gqtisfecfp gytlignaal tclhgisrnw nhplprceal
     2281 cggnitamng tiyspgypde ypnfqdcfwl vrvppgngiy inftvlqtep iydfitvwdg
     2341 pdqtspqigq fsgntalesv ystsnqilik fhsdfttsgf fvlsyhayql rvcqppanvp
     2401 naeilaedde feigdiiryq cqpgftlvgn eiltcrlger lqmdgapptc qvlcpanemr
     2461 ldstgvilsp gypdsypnlq mcawtitvek gynismffef fqtekefdil evfdgpnshs
     2521 pllislsgdy ssslnitsng hevflrwsad hgtnkkgfri ryialycstp espphgfivs
     2581 qtggqlnsmv rwacdrgfrl igkstavcrk spygyyswdv pvpacqaisc gipkaplngg
     2641 ilttdylvgt rvtyfcndgy rlsakeltta vcqpdgtwsn hnktprcvvv tcpsinsftl
     2701 ehgrwrivng shyeyktkvv fscdpgyygl gpasieclan gtwswrnerp ycqiiscgel
     2761 ptppngnkig tqitygstai ftcdsgymlv gsavreclss glwrgietrc laghcgipdl
     2821 ivngqvigen ygyrdtvvyq cspgfrligs svricqqdhn wsgqlpscvp vscghpgspi
     2881 ygrtsgngfn fndvvtfscn tgyvmqgptk aqcqanrqws hsppickvvn csdpgipans
     2941 ireskiehgn ftygtvvfyd cnpgyflfgs svlicqpngh wdkplpecim idcghpgvpp
     3001 navlsgdkyt fgstvhytct grrsllgqss rtcqlnghws gslphcsgdt agscgdpgip
     3061 ghgsreennf kikstihfsc digyilhgse ertclangsw tgrqpeckav qcgnpgttan
     3121 grvlridgtt fsnsviyscm egyilsgssv rqctangtws gslpnctiis cgdpgvpang
     3181 mrygddyvvg qnvtymcqpg ytmeanssli rtctsngtws gaiptckavt cptppqisng
     3241 rlegtnldwg fsisyvcspg yelsfpavlt cvgngtwsge vpqclpkfcg dpgvpaqgkr
     3301 egksfiyqse vsfscnppfi lvgsstricq adgtwsgssp rcieptrtac enpgvprhgs
     3361 qnntfgyqvg nvvqfqckkg hllhgsttrt clpdltwsgi qpeciphsck qpetpshanv
     3421 agmdlpslgy tliytcqpgf flaggsehra crsdgtwtgk vpvceagski lvkdprpalg
     3481 tpspklsvpd dvfaqnyiwk gsynykskkq pmtltvtsfn atsgrvnatl tnsnmellls
     3541 gvyksqearl mlhiylikap shtsasklke ekwamdgfvs aepdgatyvf qgfiqgkdyg
     3601 qfglqrigln msessnssnq phgtnsssva iailvpffal ifagfgfyly kqrtapktqy
     3661 tgcsvhennn gqaafenpmy dtnaksvegk avrfdpnlnt vctmv
//
LOCUS       XP_041326665            3538 aa            linear   VRT 06-MAY-2021
DEFINITION  CUB and sushi domain-containing protein 3 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326665
VERSION     XP_041326665.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470731.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3538
                     /product="CUB and sushi domain-containing protein 3
                     isoform X2"
                     /calculated_mol_wt=386834
     Region          65..171
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(73,75,77,104,109,143,167,169,171)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          178..236
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(188,205)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          241..344
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(249,251,253,280,285,315,339,341,343..344)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          382..440
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(392,409)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          444..552
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          560..614
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(570,587)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          617..724
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(627,629,656,661,695,719,721,723..724)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          730..787
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(740,757)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          791..898
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(799,801,803,830,835,869,893,895,897..898)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          906..959
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(916,933)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          963..1071
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(971,973,975,1002,1007,1040,1067,1069,1071)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1078..1134
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1088,1105)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1137..1244
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1145,1147,1149,1176,1181,1215,1239,1241,1243..1244)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1250..1307
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1260,1278)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1310..1418
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1319,1321,1323,1350,1355,1389,1413,1415,1417..1418)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1424..1481
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1434,1451)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1484..1591
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1492,1494,1496,1523,1528,1562,1586,1588,1590..1591)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1597..1654
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(1607,1624)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1658..1765
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1666,1668,1670,1697,1735,1760,1762,1764..1765)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1774..1832
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1784,1801)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1835..1942
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1845,1847,1874,1879,1913,1937,1939,1941..1942)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1948..2003
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1958,1975)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2007..2114
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2015,2017,2019,2046,2051,2085,2109,2111,2113..2114)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2120..2176
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2130,2147)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2179..2285
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2187,2189,2191,2218,2223,2257,2280,2282,2284..2285)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2291..2349
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2301,2320)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2356..2462
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2362,2364,2366,2393,2398,2433,2457,2459,2461..2462)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2462..>2636
                     /region_name="PHA02639"
                     /note="EEV host range protein; Provisional"
                     /db_xref="CDD:165022"
     Region          2587..2822
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2759..2999
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2999..3238
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          3242..3298
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(3252,3270)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..3538
                     /gene="CSMD3"
                     /coded_by="XM_041470731.1:1..10617"
                     /db_xref="GeneID:121355357"
ORIGIN      
        1 mkgicrgeir akeskiadfw ergctkcgrl dfilvkkmei ksgftfwnlv fllmvscvkg
       61 fiytcggtlk glngtiespg fpygypngan ctwviiaeer nriqivfqsf aleeeydyls
      121 lydghphpan frtrltgfhl pppvtstksv fslrltsdfa vsahgfkvyy eelqssscgn
      181 pgvppkgily gqrfdvgdki ryscvtgyil dghpqltcia ssvntaswdf pvpicraeda
      241 cggtmrgssg iisspnfpne yhnnadctwt ivaepgdtis liftdfqmee kydyleiegs
      301 epptiglsgm nipppvisnk nwlrlhfvtd snhryrgfsa hyqvkkaidf ksrgfklfpg
      361 kdnsnkfsil neggikqasn lcpdpgepen gkrigsdfsl gatvqfscde dyvlqgsksi
      421 tcqriaevfa awsdhrpvck vktcgsnlqg pggtfsspnf pfqydsnaqc vwvitaintn
      481 kviqinfeef dleigydtlt igdggevgdp ktvlqvltgs fvpdlivsms nqmwlhlqtd
      541 esvgsigfkv nykeiekesc gdpgtplygi regdgfsnrd vlrfecqfgf eligeksiic
      601 qennqwsani picifpclsn ftapmgtvls pdypegygnn lnciwtiisd pgsrihlsfn
      661 dfdlesqfdf lavkdgdsvd spiigtftga evpshltsng hilrlefqad hsmsgrgfni
      721 tyntfghnec pdpgvpinar rfgdnfqlgs sisviceegf iktqgtetit cmlvdgkvmw
      781 sgpipkcgap cgghfsspsg vilspgwpgy ykdslncewv ieaepghsik itferfqtel
      841 nydvlevhdg pnllspllgs yngtqvpqfl fsssnfmyll fttdnsrsnn gfkihyesvt
      901 vntyscldpg ipvhgrrygh dfsigstvsf scdpgyrlsh eepllceknh wwshplptcd
      961 alcggdvrgp sgtilspgyp dlypnslnct wtvdvthgkg vqftfytfhl edhhdyllit
     1021 engsftqpla rltgselpsp inaglygnfr aqlrfisdfs isyegfnisf seynlepced
     1081 pgipqfgsri gfnfgvgdil tfscssgyrl egaseviclg ggrrvwsapl prcvaecgas
     1141 ttnnegills pnyplnyenn heciysiqvq agkginisar tfhlaqgdvl kiydgkdnta
     1201 hllgaytgas lrgltlssts nhlwlefnsd megtdegfql vytsfelshc edpgvpqfgy
     1261 kisdqghfag stiiygcnpg ytlhgssllk cmtgerrawd yplpsciaec ggrfkgessg
     1321 rilspgypfp ydnnlrcmwv ievdpgnivs lqflafdtea shdilrvwdg ppenemllke
     1381 isgslipegi hstlnivtiq fdtdfyisks gfaiqfsssv atacrdpgvp mngtrngdgr
     1441 epgdtvifqc dpgyelqgde ritciqvenr yfwqpnppvc iapcggnltg ssgfilspnf
     1501 phpyphsrdc dwtinvnsdy vislafisfs iepnydflyi ydgpdsnspl igsfqdsklp
     1561 eriesssntm hlafrsdgsv sftgfhleyk aklrescfdp gnimngtrlg mdyklgstvt
     1621 yycdagyvlq gystltcimg ddgrpgwnra lpschapcgs rstgsegtvl spnypknysv
     1681 ghnciysitv pkefvvfgqf vffqtslhdv vevydgpalq ssllsslsgs hsgeslplss
     1741 gnqitvrfts vgpvtakgfh fvyqavprts atqcssvpep rfgkrignef avgslvlfec
     1801 npgyilhgst aircdtvpna laqwndslpt civpcggilt krkgtilspg ypepydnnln
     1861 cvwkitvpeg agiqvqvvsf atehnwdsld fydgadnnap rlgsysgtti ppllnstsnn
     1921 lylnfqsdis vsaagfhley taigldscpe pqtpsngiki gdrymvgdvv sfqcdqgysl
     1981 qghsyitcmp gpvrrwnypi piclaqcggg msdfsgvils pgfpgnypss ldctwtiklp
     2041 igfgvhlqfl nfstetihdy levrsgstet stvigrlsgp qlpaslfstt hetslyfhsd
     2101 ysqnkqgfhi vyqayqlqsc pdprpfrngf vvgndftvgq tisfecfpgy tlignaaltc
     2161 lhgisrnwnh plprcealcg gnitamngti yspgypdeyp nfqdcfwlvr vppgngiyin
     2221 ftvlqtepiy dfitvwdgpd qtspqigqfs gntalesvys tsnqilikfh sdfttsgffv
     2281 lsyhayqlrv cqppanvpna eilaeddefe igdiiryqcq pgftlvgnei ltcrlgerlq
     2341 mdgapptcqv lcpanemrld stgvilspgy pdsypnlqmc awtitvekgy nismffeffq
     2401 tekefdilev fdgpnshspl lislsgdyss slnitsnghe vflrwsadhg tnkkgfriry
     2461 ialycstpes pphgfivsqt ggqlnsmvrw acdrgfrlig kstavcrksp ygyyswdvpv
     2521 pacqaiscgi pkaplnggil ttdylvgtrv tyfcndgyrl sakelttavc qpdgtwsnhn
     2581 ktprcvvisc gelptppngn kigtqitygs taiftcdsgy mlvgsavrec lssglwrgie
     2641 trclaghcgi pdlivngqvi genygyrdtv vyqcspgfrl igssvricqq dhnwsgqlps
     2701 cvpvscghpg spiygrtsgn gfnfndvvtf scntgyvmqg ptkaqcqanr qwshsppick
     2761 vvncsdpgip ansireskie hgnftygtvv fydcnpgyfl fgssvlicqp nghwdkplpe
     2821 cimidcghpg vppnavlsgd kytfgstvhy tctgrrsllg qssrtcqlng hwsgslphcs
     2881 gdtagscgdp gipghgsree nnfkikstih fscdigyilh gseertclan gswtgrqpec
     2941 kavqcgnpgt tangrvlrid gttfsnsviy scmegyilsg ssvrqctang twsgslpnct
     3001 iiscgdpgvp angmrygddy vvgqnvtymc qpgytmeans slirtctsng twsgaiptck
     3061 avtcptppqi sngrlegtnl dwgfsisyvc spgyelsfpa vltcvgngtw sgevpqclpk
     3121 fcgdpgvpaq gkregksfiy qsevsfscnp pfilvgsstr icqadgtwsg ssprcieptr
     3181 tacenpgvpr hgsqnntfgy qvgnvvqfqc kkghllhgst trtclpdltw sgiqpeciph
     3241 sckqpetpsh anvagmdlps lgytliytcq pgfflaggse hracrsdgtw tgkvpvceag
     3301 skilvkdprp algtpspkls vpddvfaqny iwkgsynyks kkqpmtltvt sfnatsgrvn
     3361 atltnsnmel llsgvyksqe arlmlhiyli kapshtsask lkeekwamdg fvsaepdgat
     3421 yvfqgfiqgk dygqfglqri glnmsessns snqphgtnss svaiailvpf falifagfgf
     3481 ylykqrtapk tqytgcsvhe nnngqaafen pmydtnaksv egkavrfdpn lntvctmv
//
LOCUS       XP_041326666            3507 aa            linear   VRT 06-MAY-2021
DEFINITION  CUB and sushi domain-containing protein 3 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326666
VERSION     XP_041326666.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470732.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..3507
                     /product="CUB and sushi domain-containing protein 3
                     isoform X3"
                     /calculated_mol_wt=383832
     Region          65..171
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(73,75,77,104,109,143,167,169,171)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          178..236
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(188,205)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          241..344
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(249,251,253,280,285,315,339,341,343..344)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          356..414
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(366,383)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          418..526
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Region          534..588
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(544,561)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          591..698
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(601,603,630,635,669,693,695,697..698)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          704..761
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(714,731)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          765..872
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(773,775,777,804,809,843,867,869,871..872)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          880..933
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(890,907)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          937..1045
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(945,947,949,976,981,1014,1041,1043,1045)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1052..1108
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1062,1079)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1111..1218
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1119,1121,1123,1150,1155,1189,1213,1215,1217..1218)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1224..1281
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1234,1252)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1284..1392
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1293,1295,1297,1324,1329,1363,1387,1389,1391..1392)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1398..1455
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1408,1425)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1458..1565
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1466,1468,1470,1497,1502,1536,1560,1562,1564..1565)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1571..1628
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(1581,1598)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1678..1736
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1688,1705)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1739..1846
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1749,1751,1778,1783,1817,1841,1843,1845..1846)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          1852..1907
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(1862,1879)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          1911..2018
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(1919,1921,1923,1950,1955,1989,2013,2015,2017..2018)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2024..2080
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2034,2051)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2083..2189
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2091,2093,2095,2122,2127,2161,2184,2186,2188..2189)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2195..2253
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(2205,2224)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2260..2366
                     /region_name="CUB"
                     /note="CUB domain; extracellular domain; present in
                     proteins mostly known to be involved in development; not
                     found in prokaryotes, plants and yeast; cd00041"
                     /db_xref="CDD:238001"
     Site            order(2266,2268,2270,2297,2302,2337,2361,2363,2365..2366)
                     /site_type="other"
                     /note="heterodimerization interface [polypeptide binding]"
                     /db_xref="CDD:238001"
     Region          2369..2427
                     /region_name="CCP"
                     /note="Domain abundant in complement control proteins;
                     SUSHI repeat; short complement-like repeat (SCR);
                     smart00032"
                     /db_xref="CDD:214478"
     Site            order(2379,2397)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     Region          2427..2671
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2556..2791
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2728..2968
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          2968..3207
                     /region_name="PHA02927"
                     /note="secreted complement-binding protein; Provisional"
                     /db_xref="CDD:222943"
     Region          3211..3267
                     /region_name="CCP"
                     /note="Complement control protein (CCP) modules (aka short
                     consensus repeats SCRs or SUSHI repeats) have been
                     identified in several proteins of the complement system;
                     cd00033"
                     /db_xref="CDD:153056"
     Site            order(3221,3239)
                     /site_type="active"
                     /note="receptor-ligand interactions [active]"
                     /db_xref="CDD:153056"
     CDS             1..3507
                     /gene="CSMD3"
                     /coded_by="XM_041470732.1:1..10524"
                     /db_xref="GeneID:121355357"
ORIGIN      
        1 mkgicrgeir akeskiadfw ergctkcgrl dfilvkkmei ksgftfwnlv fllmvscvkg
       61 fiytcggtlk glngtiespg fpygypngan ctwviiaeer nriqivfqsf aleeeydyls
      121 lydghphpan frtrltgfhl pppvtstksv fslrltsdfa vsahgfkvyy eelqssscgn
      181 pgvppkgily gqrfdvgdki ryscvtgyil dghpqltcia ssvntaswdf pvpicraeda
      241 cggtmrgssg iisspnfpne yhnnadctwt ivaepgdtis liftdfqmee kydyleiegs
      301 epptiglsgm nipppvisnk nwlrlhfvtd snhryrgfsa hyqvneggik qasnlcpdpg
      361 epengkrigs dfslgatvqf scdedyvlqg sksitcqria evfaawsdhr pvckvktcgs
      421 nlqgpggtfs spnfpfqyds naqcvwvita intnkviqin feefdleigy dtltigdgge
      481 vgdpktvlqv ltgsfvpdli vsmsnqmwlh lqtdesvgsi gfkvnykeie kescgdpgtp
      541 lygiregdgf snrdvlrfec qfgfeligek siicqennqw sanipicifp clsnftapmg
      601 tvlspdypeg ygnnlnciwt iisdpgsrih lsfndfdles qfdflavkdg dsvdspiigt
      661 ftgaevpshl tsnghilrle fqadhsmsgr gfnityntfg hnecpdpgvp inarrfgdnf
      721 qlgssisvic eegfiktqgt etitcmlvdg kvmwsgpipk cgapcgghfs spsgvilspg
      781 wpgyykdsln cewvieaepg hsikitferf qtelnydvle vhdgpnllsp llgsyngtqv
      841 pqflfsssnf myllfttdns rsnngfkihy esvtvntysc ldpgipvhgr ryghdfsigs
      901 tvsfscdpgy rlsheepllc eknhwwshpl ptcdalcggd vrgpsgtils pgypdlypns
      961 lnctwtvdvt hgkgvqftfy tfhledhhdy llitengsft qplarltgse lpspinagly
     1021 gnfraqlrfi sdfsisyegf nisfseynle pcedpgipqf gsrigfnfgv gdiltfscss
     1081 gyrlegasev iclgggrrvw saplprcvae cgasttnneg illspnypln yennheciys
     1141 iqvqagkgin isartfhlaq gdvlkiydgk dntahllgay tgaslrgltl sstsnhlwle
     1201 fnsdmegtde gfqlvytsfe lshcedpgvp qfgykisdqg hfagstiiyg cnpgytlhgs
     1261 sllkcmtger rawdyplpsc iaecggrfkg essgrilspg ypfpydnnlr cmwvievdpg
     1321 nivslqflaf dteashdilr vwdgppenem llkeisgsli pegihstlni vtiqfdtdfy
     1381 isksgfaiqf sssvatacrd pgvpmngtrn gdgrepgdtv ifqcdpgyel qgderitciq
     1441 venryfwqpn ppvciapcgg nltgssgfil spnfphpyph srdcdwtinv nsdyvislaf
     1501 isfsiepnyd flyiydgpds nspligsfqd sklperiess sntmhlafrs dgsvsftgfh
     1561 leykaklres cfdpgnimng trlgmdyklg stvtyycdag yvlqgystlt cimgddgrpg
     1621 wnralpscha pcgsrstgse gtvlspnypk nysvghnciy sitvpkefav prtsatqcss
     1681 vpeprfgkri gnefavgslv lfecnpgyil hgstaircdt vpnalaqwnd slptcivpcg
     1741 giltkrkgti lspgypepyd nnlncvwkit vpegagiqvq vvsfatehnw dsldfydgad
     1801 nnaprlgsys gttippllns tsnnlylnfq sdisvsaagf hleytaigld scpepqtpsn
     1861 gikigdrymv gdvvsfqcdq gyslqghsyi tcmpgpvrrw nypipiclaq cgggmsdfsg
     1921 vilspgfpgn ypssldctwt iklpigfgvh lqflnfstet ihdylevrsg stetstvigr
     1981 lsgpqlpasl fstthetsly fhsdysqnkq gfhivyqayq lqscpdprpf rngfvvgndf
     2041 tvgqtisfec fpgytligna altclhgisr nwnhplprce alcggnitam ngtiyspgyp
     2101 deypnfqdcf wlvrvppgng iyinftvlqt epiydfitvw dgpdqtspqi gqfsgntale
     2161 svystsnqil ikfhsdftts gffvlsyhay qlrvcqppan vpnaeilaed defeigdiir
     2221 yqcqpgftlv gneiltcrlg erlqmdgapp tcqvlcpane mrldstgvil spgypdsypn
     2281 lqmcawtitv ekgynismff effqtekefd ilevfdgpns hspllislsg dyssslnits
     2341 nghevflrws adhgtnkkgf riryialycs tpespphgfi vsqtggqlns mvrwacdrgf
     2401 rligkstavc rkspygyysw dvpvpacqai scgipkapln ggilttdylv gtrvtyfcnd
     2461 gyrlsakelt tavcqpdgtw snhnktprcv vvtcpsinsf tlehgrwriv ngshyeyktk
     2521 vvfscdpgyy glgpasiecl angtwswrne rpycqiiscg elptppngnk igtqitygst
     2581 aiftcdsgym lvgsavrecl ssglwrgiet rclaghcgip dlivngqvig enygyrdtvv
     2641 yqcspgfrli gssvricqqd hnwsgqlpsc vpvscghpgs piygrtsgng fnfndvvtfs
     2701 cntgyvmqgp tkaqcqanrq wshsppickv vncsdpgipa nsireskieh gnftygtvvf
     2761 ydcnpgyflf gssvlicqpn ghwdkplpec imidcghpgv ppnavlsgdk ytfgstvhyt
     2821 ctgrrsllgq ssrtcqlngh wsgslphcsg dtagscgdpg ipghgsreen nfkikstihf
     2881 scdigyilhg seertclang swtgrqpeck avqcgnpgtt angrvlridg ttfsnsviys
     2941 cmegyilsgs svrqctangt wsgslpncti iscgdpgvpa ngmrygddyv vgqnvtymcq
     3001 pgytmeanss lirtctsngt wsgaiptcka vtcptppqis ngrlegtnld wgfsisyvcs
     3061 pgyelsfpav ltcvgngtws gevpqclpkf cgdpgvpaqg kregksfiyq sevsfscnpp
     3121 filvgsstri cqadgtwsgs sprcieptrt acenpgvprh gsqnntfgyq vgnvvqfqck
     3181 kghllhgstt rtclpdltws giqpeciphs ckqpetpsha nvagmdlpsl gytliytcqp
     3241 gfflaggseh racrsdgtwt gkvpvceags kilvkdprpa lgtpspklsv pddvfaqnyi
     3301 wkgsynyksk kqpmtltvts fnatsgrvna tltnsnmell lsgvyksqea rlmlhiylik
     3361 apshtsaskl keekwamdgf vsaepdgaty vfqgfiqgkd ygqfglqrig lnmsessnss
     3421 nqphgtnsss vaiailvpff alifagfgfy lykqrtapkt qytgcsvhen nngqaafenp
     3481 mydtnaksve gkavrfdpnl ntvctmv
//
LOCUS       XP_041326667             507 aa            linear   VRT 06-MAY-2021
DEFINITION  dihydropyrimidinase [Pyrgilauda ruficollis].
ACCESSION   XP_041326667
VERSION     XP_041326667.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470733.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..507
                     /product="dihydropyrimidinase"
                     /calculated_mol_wt=55191
     Region          11..462
                     /region_name="D-HYD"
                     /note="D-hydantoinases (D-HYD) also called
                     dihydropyrimidases (DHPase) and related proteins; DHPases
                     are a family of enzymes that catalyze the reversible
                     hydrolytic ring opening of the amide bond in five- or
                     six-membered cyclic diamides, like dihydropyrimidine...;
                     cd01314"
                     /db_xref="CDD:238639"
     Site            order(22..23,25,38..39,176,197,200,203,226,230,234,237,
                     264..265,267..268,386,391,396)
                     /site_type="other"
                     /note="tetramer interface [polypeptide binding]"
                     /db_xref="CDD:238639"
     Site            order(69,71,161,194,250,328)
                     /site_type="active"
                     /db_xref="CDD:238639"
     CDS             1..507
                     /gene="DPYS"
                     /coded_by="XM_041470733.1:1..1524"
                     /db_xref="GeneID:121355359"
ORIGIN      
        1 mppqtrarqr llikggkvvn adlsvvadvy vedgvvqqvg pnlnpepstg lvvldatnkl
       61 vipggidtht hmefpfmgsr skddfytgtk aaiaggttmi idfaipqkgc slteafdtwk
      121 swadpkvccd yslhvavtww snkvkqemes lvqnkgvnsf kmfmaykdiy mvndeelyea
      181 fscckelgav aqvhaengel iaqgakkmla mgitgpeghe lcrpeeveae atqraitian
      241 avncplyvvh vmskssakvi snarregkvv ygepiaaslg tdgtnywnkd wahaaayvmg
      301 pplrpdpstp gflmnllang dlsvtgtdnc tfdicqkalg kddftkipng vngvedrmsv
      361 iwekgvhsgk mdenrfvavt stnaakifnl ypkkgriavg sdadiviwdp katrtisakt
      421 hhqannfnif egmvchgvpv vtvsrgkvvy ecgvfnvtag egkyvsrppf ppyvykrvrq
      481 reqvcqpvpv krapytgtvs gtpvtqk
//
LOCUS       XP_041326668             138 aa            linear   VRT 06-MAY-2021
DEFINITION  2-iminobutanoate/2-iminopropanoate deaminase [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326668
VERSION     XP_041326668.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470734.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..138
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..138
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /calculated_mol_wt=14534
     Region          6..128
                     /region_name="TIGR00004"
                     /note="reactive intermediate/imine deaminase"
                     /db_xref="CDD:129116"
     Site            order(20..21,24,26,29,31,33..34,74,76..77,79,81,92,95,
                     104..111,121,123,125)
                     /site_type="other"
                     /note="homotrimer interaction site [polypeptide binding]"
                     /db_xref="CDD:100004"
     Site            order(20,88,92,106,121)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:100004"
     CDS             1..138
                     /gene="RIDA"
                     /coded_by="XM_041470734.1:61..477"
                     /db_xref="GeneID:121355360"
ORIGIN      
        1 maslvkkiis ttkapalgpy sqgvlvdrtm yiagqiglep stgqlvsgga keeakqalkn
       61 mgeilkaagc dygnvvkttv lmadmkdynd indvykqffk anfparaayq vaalprgarv
      121 eieaiaikgp lqdasall
//
LOCUS       XP_041326670             405 aa            linear   VRT 06-MAY-2021
DEFINITION  betaine--homocysteine S-methyltransferase 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326670
VERSION     XP_041326670.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470736.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..405
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..405
                     /product="betaine--homocysteine S-methyltransferase 1"
                     /calculated_mol_wt=45004
     Region          25..316
                     /region_name="S-methyl_trans"
                     /note="Homocysteine S-methyltransferase; pfam02574"
                     /db_xref="CDD:460598"
     CDS             1..405
                     /gene="LOC121355361"
                     /coded_by="XM_041470736.1:57..1274"
                     /db_xref="GeneID:121355361"
ORIGIN      
        1 mlpirktakq gkrgilerld ageivigdgg fvfalekrgy vkagpwtpea tvehpeavrq
       61 lhreflrags nvlqtftfya sedklenrgn yvaekischk vneaacdiar evanegdalv
      121 aggvsqtpsy lsckdktevk aafqkqlevf mkknvdflia eyfehveeav wavevlkesg
      181 kpvaatmcig pegdmhgvsp gqcavqlvka gasivgvnch fdpetsietv rlmkeglqaa
      241 klkahlmcqp lafhtpdcgk qgfidlpefp fglepriatr wdiqkyarka ydlgirfigg
      301 ccgfepyhir aiaeelaper gflpeasekh gswgdnlsmh tkpwvrarar keywenlkpa
      361 sgrpycpcms kpdgwgvtrg akelmqqkea tteqqlkelf qkkkf
//
LOCUS       XP_041326671             249 aa            linear   VRT 06-MAY-2021
DEFINITION  rRNA-processing protein UTP23 homolog [Pyrgilauda ruficollis].
ACCESSION   XP_041326671
VERSION     XP_041326671.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470737.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="rRNA-processing protein UTP23 homolog"
                     /calculated_mol_wt=28249
     Region          19..148
                     /region_name="PIN_Fcf1-Utp23-H"
                     /note="VapC-like PIN domain of rRNA-processing protein
                     Fcf1- and Utp23-like homologs found in eukaryotes except
                     fungi; similar to human rRNA-processing protein UTP23;
                     cd09866"
                     /db_xref="CDD:350214"
     CDS             1..249
                     /gene="UTP23"
                     /coded_by="XM_041470737.1:34..783"
                     /db_xref="GeneID:121355362"
ORIGIN      
        1 mgvtrqkhak kimgfyknnf qfrepfqvll dgtfcqaalr nkiqireqlp gyldgaaqlc
       61 ttrcvikele slgkalygak liaqrfqvrn cshhknpvsg sacllsmied gnphhffiat
      121 qdqdlsnkvk rkpgipllfi iqntmvldkp spkslafvqk lqtnqlvpey qkqsivelke
      181 keglvkqege krrkrkragg pnplsclkkk kkktqegqep saekkkrrkr krnrvkaeam
      241 qsvqkngge
//
LOCUS       XP_041326672             770 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc transporter 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326672
VERSION     XP_041326672.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470738.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..770
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..770
                     /product="zinc transporter 5"
                     /calculated_mol_wt=84362
     Region          420..735
                     /region_name="CzcD"
                     /note="Co/Zn/Cd efflux system component [Inorganic ion
                     transport and metabolism]; COG1230"
                     /db_xref="CDD:440843"
     CDS             1..770
                     /gene="SLC30A5"
                     /coded_by="XM_041470738.1:226..2538"
                     /db_xref="GeneID:121355363"
ORIGIN      
        1 meqpyggqal agggalgpvd vpsarltryi vllcfakvlk avglfesydl lkavhlvqfi
       61 fvvklgsaff mvlfqkpfss gkvvtkrqwi kifkhavvgc iisllwffgl tlcgplrtll
      121 lfehsdvvvl sllsvlftss gggpaktrga affiiavicl llfdnddlma kiaehpeghh
      181 dsalthvlyt iiaflgvadh kggvlllvla lcckvgfhma srklsvdvgg akrlqalshl
      241 vsvlllcpwv vvlslttesk veswsslimp fitviffvvi ldfyvesics vkmeastcar
      301 ygsflifisa llfgnfwthp itdqlramnk pphhestehv lsggvvvsav ffvlsanils
      361 spsrkgqkgt ligyspegtp lynfmgdalq qssqslprfi keslkqilee ydsrqifyfl
      421 clnlaftfve lfygvwtnsl glisdgfhml fdcsalvmgl faalmtrwka trifsygygr
      481 veilsgfing lflmviaffv fmesvarlvd ppdidtnmlt pvsvgglivn lvgicafsha
      541 hshgasrggc pthdhshshh ghshshghgh shsdhghshg hshgssgggm ntnmrgvflh
      601 vladtlgsvg vivstifiqq fgwliadplc slfiatlifl svipllkdac qvlllrippe
      661 qekdlhaale kiqkiegvis yrdphfwchs atvvagtihv qvvtdvmeqr ivqqvtailk
      721 dagvnnltvq vekeayfqhm sglstgfqdv lamtqqlesm kyykdgtyim
//
LOCUS       XP_041326673             953 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin-4 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326673
VERSION     XP_041326673.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470739.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..953
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..953
                     /product="thrombospondin-4 isoform X1"
                     /calculated_mol_wt=104478
     Region          <52..192
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          218..261
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293926"
     Region          218..261
                     /region_name="TSP-4cc"
                     /note="Coiled coil region of thrombospondin-4 (TSP-4);
                     cd16080"
                     /db_xref="CDD:293926"
     Site            order(218..223,225..230,233,235..237,239..241,243..244,
                     246..251,253..255,257..260)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293926"
     Site            order(229,240,243)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293926"
     Region          315..350
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(315,318,332)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          368..407
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(368,371,388)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <454..649
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          455..487
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          488..523
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          524..582
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          583..605
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          606..643
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          607..643
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          644..683
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          684..718
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          684..715
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          737..934
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..953
                     /gene="THBS4"
                     /coded_by="XM_041470739.1:1..2862"
                     /db_xref="GeneID:121355364"
ORIGIN      
        1 mgcergaall llplalqlcp graaapvprv fdllpysnkr vllnflqqaf gdpmlnevyl
       61 lstfklqpks tatvfglyss adnskyfeft vmgrmskavl rylkgdgrln svifsniqla
      121 dgkphavilw lsglqqglst ielyldclqv gaiedlpkpf salsqkvvaa elrtlqekpq
      181 dtldelklvt ggtlaevgnl qdcflqkiep vpqytgdfnr qlmgqmmqmn qllgdvkdll
      241 rqqvkettfl rntiaecqac glgtvsfptq lprrtkpkce vnscfrgvrc metaegfqcg
      301 pcpegltgng vtcsdidecr ynpcfpgvrc vntapgfrce acppgytgqt vqgiglsyak
      361 snkqvcldid ecqngghglc vpnshcintl gsyhcgqckp gytgdqtrgc qaerscrnra
      421 lnpcsiharc ieerrgevtc icgigwagdg yicgkdvdid gypneelscs aencrkdncr
      481 fvpnsgqeda dsdgigdacd ddadgdgipn eqdncvlvpn vnqrnsdqdi fgdacdncrn
      541 vlnndqrdtd gdgkgdacdd dmdgdgvknl ldncqripne dqedtdndgv gdacdscpti
      601 snpnqsdvdn dlvgdscdtn qdsdgdghqd stdncptvin ssqldtdkdg lgdecdeddd
      661 ndgipdllpp gpdncrlvpn pgqeddngdg vgdvcesdfd qdtvidridv cpenaeitlt
      721 dfrayqtvvl dpegdaqidp nwvvlnqgme ivqtmnsdpg lavgytafng vdfegtfhvn
      781 tvtdddyagf ifgyqdsssf yvvmwkqteq tywqatpfra vaepgiqlka vksktgpgeh
      841 lrnslwhtgd tndqvrllwk dprnvgwkdk vsyrwflqhr pqigyirarf yegsdlvads
      901 gvtidttmrg grlgvfcfsq eniiwsnlky rcndtipedf qefqaqqfgv gdi
//
LOCUS       XP_041326674             742 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin-4 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326674
VERSION     XP_041326674.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470740.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..742
                     /product="thrombospondin-4 isoform X2"
                     /calculated_mol_wt=81242
     Region          19..61
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293926"
     Region          19..61
                     /region_name="TSP-4cc"
                     /note="Coiled coil region of thrombospondin-4 (TSP-4);
                     cd16080"
                     /db_xref="CDD:293926"
     Site            order(19..23,25..30,33,35..37,39..41,43..44,46..51,53..55,
                     57..60)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293926"
     Site            order(29,40,43)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293926"
     Region          104..139
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(104,107,121)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          157..194
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(157,160,177)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          244..276
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          277..312
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          313..371
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          372..394
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          395..432
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          396..432
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          433..472
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          473..507
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          473..504
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          526..723
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..742
                     /gene="THBS4"
                     /coded_by="XM_041470740.1:16..2244"
                     /db_xref="GeneID:121355364"
ORIGIN      
        1 mgrmskvlng vhsvqgdktk qlmgqmmqmn qllgdvkdll rqqvkettfl rntiaecqac
       61 gertkpkcev nscfrgvrcm etaegfqcgp cpegltgngv tcsdidecry npcfpgvrcv
      121 ntapgfrcea cppgytgqtv qgiglsyaks nkqvcldide cqngghglcv pnshcintlg
      181 syhcgqckpg ytgdqtrgcq aerscrnral npcsiharci eerrgevtci cgigwagdgy
      241 icgkdvdidg ypneelscsa encrkdncrf vpnsgqedad sdgigdacdd dadgdgipne
      301 qdncvlvpnv nqrnsdqdif gdacdncrnv lnndqrdtdg dgkgdacddd mdgdgvknll
      361 dncqripned qedtdndgvg dacdscptis npnqsdvdnd lvgdscdtnq dsdgdghqds
      421 tdncptvins sqldtdkdgl gdecdedddn dgipdllppg pdncrlvpnp gqeddngdgv
      481 gdvcesdfdq dtvidridvc penaeitltd frayqtvvld pegdaqidpn wvvlnqgmei
      541 vqtmnsdpgl avgytafngv dfegtfhvnt vtdddyagfi fgyqdsssfy vvmwkqteqt
      601 ywqatpfrav aepgiqlkav ksktgpgehl rnslwhtgdt ndqvrllwkd prnvgwkdkv
      661 syrwflqhrp qigyirarfy egsdlvadsg vtidttmrgg rlgvfcfsqe niiwsnlkyr
      721 cndtipedfq efqaqqfgvg di
//
LOCUS       XP_041326675             870 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin-4 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326675
VERSION     XP_041326675.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470741.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..870
                     /product="thrombospondin-4 isoform X3"
                     /calculated_mol_wt=95526
     Region          <1..101
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          127..170
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293926"
     Region          127..170
                     /region_name="TSP-4cc"
                     /note="Coiled coil region of thrombospondin-4 (TSP-4);
                     cd16080"
                     /db_xref="CDD:293926"
     Site            order(127..132,134..139,142,144..146,148..150,152..153,
                     155..160,162..164,166..169)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293926"
     Site            order(138,149,152)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293926"
     Region          232..267
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(232,235,249)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          285..324
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(285,288,305)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <371..566
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          372..404
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          405..440
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          441..499
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          500..522
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          523..560
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          524..560
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          561..600
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          601..635
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          601..632
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          654..851
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..870
                     /gene="THBS4"
                     /coded_by="XM_041470741.1:16..2628"
                     /db_xref="GeneID:121355364"
ORIGIN      
        1 mgrmskavlr ylkgdgrlns vifsniqlad gkphavilwl sglqqglsti elyldclqvg
       61 aiedlpkpfs alsqkvvaae lrtlqekpqd tldelklvtg gtlaevgnlq dcflqkiepv
      121 pqytgdfnrq lmgqmmqmnq llgdvkdllr qqvkettflr ntiaecqacg eysfkflhal
      181 vpifptqlpr rtkpkcevns cfrgvrcmet aegfqcgpcp egltgngvtc sdidecrynp
      241 cfpgvrcvnt apgfrceacp pgytgqtvqg iglsyaksnk qvcldidecq ngghglcvpn
      301 shcintlgsy hcgqckpgyt gdqtrgcqae rscrnralnp csiharciee rrgevtcicg
      361 igwagdgyic gkdvdidgyp neelscsaen crkdncrfvp nsgqedadsd gigdacddda
      421 dgdgipneqd ncvlvpnvnq rnsdqdifgd acdncrnvln ndqrdtdgdg kgdacdddmd
      481 gdgvknlldn cqripnedqe dtdndgvgda cdscptisnp nqsdvdndlv gdscdtnqds
      541 dgdghqdstd ncptvinssq ldtdkdglgd ecdedddndg ipdllppgpd ncrlvpnpgq
      601 eddngdgvgd vcesdfdqdt vidridvcpe naeitltdfr ayqtvvldpe gdaqidpnwv
      661 vlnqgmeivq tmnsdpglav gytafngvdf egtfhvntvt dddyagfifg yqdsssfyvv
      721 mwkqteqtyw qatpfravae pgiqlkavks ktgpgehlrn slwhtgdtnd qvrllwkdpr
      781 nvgwkdkvsy rwflqhrpqi gyirarfyeg sdlvadsgvt idttmrggrl gvfcfsqeni
      841 iwsnlkyrcn dtipedfqef qaqqfgvgdi
//
LOCUS       XP_041326676             867 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin-4 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326676
VERSION     XP_041326676.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470742.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..867
                     /product="thrombospondin-4 isoform X4"
                     /calculated_mol_wt=94871
     Region          <1..101
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          132..175
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293926"
     Region          132..175
                     /region_name="TSP-4cc"
                     /note="Coiled coil region of thrombospondin-4 (TSP-4);
                     cd16080"
                     /db_xref="CDD:293926"
     Site            order(132..137,139..144,147,149..151,153..155,157..158,
                     160..165,167..169,171..174)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293926"
     Site            order(143,154,157)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293926"
     Region          229..264
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(229,232,246)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          282..321
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(282,285,302)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <368..563
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          369..401
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          402..437
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          438..496
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          497..519
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          520..557
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          521..557
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          558..597
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          598..632
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          598..629
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          651..848
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..867
                     /gene="THBS4"
                     /coded_by="XM_041470742.1:16..2619"
                     /db_xref="GeneID:121355364"
ORIGIN      
        1 mgrmskavlr ylkgdgrlns vifsniqlad gkphavilwl sglqqglsti elyldclqvg
       61 aiedlpkpfs alsqkvvaae lrtlqekpqd tldelklvtg gtlaevgnlq dcflqkiepv
      121 pqytgtsstg dfnrqlmgqm mqmnqllgdv kdllrqqvke ttflrntiae cqacglgtvs
      181 fptqlprrtk pkcevnscfr gvrcmetaeg fqcgpcpegl tgngvtcsdi decrynpcfp
      241 gvrcvntapg frceacppgy tgqtvqgigl syaksnkqvc ldidecqngg hglcvpnshc
      301 intlgsyhcg qckpgytgdq trgcqaersc rnralnpcsi harcieerrg evtcicgigw
      361 agdgyicgkd vdidgypnee lscsaencrk dncrfvpnsg qedadsdgig dacdddadgd
      421 gipneqdncv lvpnvnqrns dqdifgdacd ncrnvlnndq rdtdgdgkgd acdddmdgdg
      481 vknlldncqr ipnedqedtd ndgvgdacds cptisnpnqs dvdndlvgds cdtnqdsdgd
      541 ghqdstdncp tvinssqldt dkdglgdecd edddndgipd llppgpdncr lvpnpgqedd
      601 ngdgvgdvce sdfdqdtvid ridvcpenae itltdfrayq tvvldpegda qidpnwvvln
      661 qgmeivqtmn sdpglavgyt afngvdfegt fhvntvtddd yagfifgyqd sssfyvvmwk
      721 qteqtywqat pfravaepgi qlkavksktg pgehlrnslw htgdtndqvr llwkdprnvg
      781 wkdkvsyrwf lqhrpqigyi rarfyegsdl vadsgvtidt tmrggrlgvf cfsqeniiws
      841 nlkyrcndti pedfqefqaq qfgvgdi
//
LOCUS       XP_041326677             860 aa            linear   VRT 06-MAY-2021
DEFINITION  thrombospondin-4 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326677
VERSION     XP_041326677.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470743.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..860
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..860
                     /product="thrombospondin-4 isoform X5"
                     /calculated_mol_wt=94267
     Region          <1..101
                     /region_name="LamG"
                     /note="Laminin G domain; Laminin G-like domains are
                     usually Ca++ mediated receptors that can have binding
                     sites for steroids, beta1 integrins, heparin, sulfatides,
                     fibulin-1, and alpha-dystroglycans. Proteins that contain
                     LamG domains serve a variety of...; cl22861"
                     /db_xref="CDD:473984"
     Region          127..170
                     /region_name="coiled coil"
                     /note="coiled coil [structural motif]"
                     /db_xref="CDD:293926"
     Region          127..170
                     /region_name="TSP-4cc"
                     /note="Coiled coil region of thrombospondin-4 (TSP-4);
                     cd16080"
                     /db_xref="CDD:293926"
     Site            order(127..132,134..139,142,144..146,148..150,152..153,
                     155..160,162..164,166..169)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293926"
     Site            order(138,149,152)
                     /site_type="other"
                     /note="chemical substrate binding site [chemical binding]"
                     /db_xref="CDD:293926"
     Region          222..257
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain, present in a large
                     number of membrane-bound and extracellular (mostly animal)
                     proteins. Many of these proteins require calcium for their
                     biological function and calcium-binding sites have been
                     found to be located at the...; cd00054"
                     /db_xref="CDD:238011"
     Site            order(222,225,239)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          275..314
                     /region_name="EGF_CA"
                     /note="Calcium-binding EGF-like domain; smart00179"
                     /db_xref="CDD:214542"
     Site            order(275,278,295)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238011"
     Region          <361..556
                     /region_name="MSCRAMM_ClfA"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     NF033609"
                     /db_xref="CDD:468110"
     Region          362..394
                     /region_name="TSP3 repeat_1C"
                     /note="TSP3 repeat_1C [structural motif]"
                     /db_xref="CDD:275367"
     Region          395..430
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          431..489
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275366"
     Region          490..512
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275365"
     Region          513..550
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          514..550
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          551..590
                     /region_name="TSP3 repeat_short"
                     /note="TSP3 repeat_short [structural motif]"
                     /db_xref="CDD:275366"
     Region          591..625
                     /region_name="TSP_3"
                     /note="Thrombospondin type 3 repeat; pfam02412"
                     /db_xref="CDD:367074"
     Region          591..622
                     /region_name="TSP3 repeat_long"
                     /note="TSP3 repeat_long [structural motif]"
                     /db_xref="CDD:275365"
     Region          644..841
                     /region_name="TSP_C"
                     /note="Thrombospondin C-terminal region; pfam05735"
                     /db_xref="CDD:461725"
     CDS             1..860
                     /gene="THBS4"
                     /coded_by="XM_041470743.1:16..2598"
                     /db_xref="GeneID:121355364"
ORIGIN      
        1 mgrmskavlr ylkgdgrlns vifsniqlad gkphavilwl sglqqglsti elyldclqvg
       61 aiedlpkpfs alsqkvvaae lrtlqekpqd tldelklvtg gtlaevgnlq dcflqkiepv
      121 pqytgdfnrq lmgqmmqmnq llgdvkdllr qqvkettflr ntiaecqacg tvsfptqlpr
      181 rtkpkcevns cfrgvrcmet aegfqcgpcp egltgngvtc sdidecrynp cfpgvrcvnt
      241 apgfrceacp pgytgqtvqg iglsyaksnk qvcldidecq ngghglcvpn shcintlgsy
      301 hcgqckpgyt gdqtrgcqae rscrnralnp csiharciee rrgevtcicg igwagdgyic
      361 gkdvdidgyp neelscsaen crkdncrfvp nsgqedadsd gigdacddda dgdgipneqd
      421 ncvlvpnvnq rnsdqdifgd acdncrnvln ndqrdtdgdg kgdacdddmd gdgvknlldn
      481 cqripnedqe dtdndgvgda cdscptisnp nqsdvdndlv gdscdtnqds dgdghqdstd
      541 ncptvinssq ldtdkdglgd ecdedddndg ipdllppgpd ncrlvpnpgq eddngdgvgd
      601 vcesdfdqdt vidridvcpe naeitltdfr ayqtvvldpe gdaqidpnwv vlnqgmeivq
      661 tmnsdpglav gytafngvdf egtfhvntvt dddyagfifg yqdsssfyvv mwkqteqtyw
      721 qatpfravae pgiqlkavks ktgpgehlrn slwhtgdtnd qvrllwkdpr nvgwkdkvsy
      781 rwflqhrpqi gyirarfyeg sdlvadsgvt idttmrggrl gvfcfsqeni iwsnlkyrcn
      841 dtipedfqef qaqqfgvgdi
//
LOCUS       XP_041326678             436 aa            linear   VRT 06-MAY-2021
DEFINITION  serine incorporator 5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326678
VERSION     XP_041326678.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470744.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..436
                     /product="serine incorporator 5"
                     /calculated_mol_wt=48306
     Region          11..414
                     /region_name="Serinc"
                     /note="Serine incorporator (Serinc); pfam03348"
                     /db_xref="CDD:460891"
     CDS             1..436
                     /gene="SERINC5"
                     /coded_by="XM_041470744.1:121..1431"
                     /db_xref="GeneID:121355366"
ORIGIN      
        1 msarccagql acccgtaacs lcckccpkik qststrfmya lyfilvtiic cvmmsttvan
       61 emkthipfyk qmckgiqage mceklvgysa vykvcfgmac ffflfflfti kinnskscra
      121 yihngfwlik livlaamcsg affipdqdtf lnawryvgat ggflfiaiql illvefahkw
      181 nknwtaganh kqvwngllal vtlilysiav aalvlmalfy trpegcmynk vligvngglc
      241 lfvslvaisp cvqnrqphsg llqsgviscy vmyltfsals skppetilde nnqniticvp
      301 efsqglhrde nlvtglgtti lfgcilyscl tsttrassea lrgiyataet evarccfccv
      361 pdgdadaeeh vekrggqtvv ydekkgtvys yayfhfvffl aslyvmmtvt hwfhhshclh
      421 gqsnqlgtwt kenkat
//
LOCUS       XP_041326679             210 aa            linear   VRT 06-MAY-2021
DEFINITION  probable glutathione peroxidase 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326679
VERSION     XP_041326679.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470745.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..210
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..210
                     /product="probable glutathione peroxidase 8"
                     /calculated_mol_wt=24310
     Region          47..199
                     /region_name="Protein Disulfide Oxidoreductases and Other
                     Proteins with a Thioredoxin fold"
                     /note="The thioredoxin (TRX)-like superfamily is a large,
                     diverse group of proteins containing a TRX fold. Many
                     members contain a classic TRX domain with a redox active
                     CXXC motif. They function as protein disulfide
                     oxidoreductases (PDOs), altering the redox...; cl00388"
                     /db_xref="CDD:469754"
     Site            order(80,115,165)
                     /site_type="active"
                     /note="catalytic residues [active]"
                     /db_xref="CDD:238207"
     Site            order(114,117,119,122,125,129)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:238207"
     CDS             1..210
                     /gene="GPX8"
                     /coded_by="XM_041470745.1:9..641"
                     /db_xref="GeneID:121355367"
ORIGIN      
        1 meplttsypl kysvhkarif vvflsmvlct tvlcllqlrf fkpkikdfys fevkdsrgri
       61 islekyrgka tlvvnvasyc qytdknyial qelhrefgps hftvlafpcn qfgesepgss
      121 qeiesfakgn ygvtfpvfhk ikilgseadp afkflidssk keprwnfwky lvspegkvmk
      181 fwrpeepies ikpevtslir qiimkkredl
//
LOCUS       XP_041326680             553 aa            linear   VRT 06-MAY-2021
DEFINITION  hyaluronan synthase 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326680
VERSION     XP_041326680.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470746.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..553
                     /product="hyaluronan synthase 2"
                     /calculated_mol_wt=63647
     Region          84..361
                     /region_name="GT2_HAS"
                     /note="Hyaluronan synthases catalyze polymerization of
                     hyaluronan; cd06434"
                     /db_xref="CDD:133056"
     Site            212..214
                     /site_type="active"
                     /note="DXD motif [active]"
                     /db_xref="CDD:133056"
     CDS             1..553
                     /gene="HAS2"
                     /coded_by="XM_041470746.1:570..2231"
                     /db_xref="GeneID:121355368"
ORIGIN      
        1 mycerficil rilgttlfgv slllgitaay ivgyqfiqtd nyyfsfglyg ailashliiq
       61 slfaylehrk mkrsletpik lnktvalcia ayqedpdylr kcllsvkrlt ypgikvvmvi
      121 dgnseddvym mdifteimgr dscatyiwsn nfhdkgpget eeshresmqh vsqlvlsnks
      181 vcimqkwggk revmytafka lgrsvdyvqv cdsdtmldpa ssvemvkvle edpmvggvgg
      241 dvqilnkyds wisflssvry wmafnierac qsyfgcvqci sgplgmyrns llhefvedwy
      301 nqefmgsqcs fgddrhltnr vlslgyatky tarskcltet pieylrwlnq qtrwsksyfr
      361 ewlynamwfh khhlwmtyea vitgffpffl iatviqlfyr gkiwnillfl ltvqlvglik
      421 ssfasflrgn ivmvfmslys vlymssllpa kmfaiatink agwgtsgrkt ivvnfiglip
      481 vsiwftillg gviftiykes kkpfseskqt vliigtilya cywvllltly mvlinkcgrr
      541 kkeqqhydmv ldv
//
LOCUS       XP_041326682             277 aa            linear   VRT 06-MAY-2021
DEFINITION  collectin-10 [Pyrgilauda ruficollis].
ACCESSION   XP_041326682
VERSION     XP_041326682.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470748.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..277
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..277
                     /product="collectin-10"
                     /calculated_mol_wt=30263
     Region          45..>86
                     /region_name="Collagen"
                     /note="Collagen triple helix repeat (20 copies);
                     pfam01391"
                     /db_xref="CDD:460189"
     Region          <52..>122
                     /region_name="gly_rich_SclB"
                     /note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
                     NF038329"
                     /db_xref="CDD:468478"
     Region          157..272
                     /region_name="CLECT_collectin_like"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in human collectins including lung surfactant proteins A
                     and D, mannose- or mannan binding lectin (MBL), and CL-L1
                     (collectin liver 1); cd03591"
                     /db_xref="CDD:153061"
     Site            order(213,217,241,246..247)
                     /site_type="other"
                     /note="calcium binding site 1 [ion binding]"
                     /db_xref="CDD:153061"
     Site            order(217,241,247)
                     /site_type="other"
                     /note="calcium binding site 3 [ion binding]"
                     /db_xref="CDD:153061"
     Site            order(238,240,246,258..259)
                     /site_type="other"
                     /note="carbohydrate binding site [chemical binding]"
                     /db_xref="CDD:153061"
     CDS             1..277
                     /gene="COLEC10"
                     /coded_by="XM_041470748.1:74..907"
                     /db_xref="GeneID:121355369"
ORIGIN      
        1 msskkeqqlt kygtlvvffi lqvqifgfdv dnrpttdvcs thtilpgpkg degekgdrge
       61 vgkqgkvgpk gpkgnkgpvg digdqgmlgk igpiggkgdk gakglpgvsg kkgkagtvcd
      121 cgryrrfvgq lninvarlnt sikfvknvia giretdekfy yivkeeknyr ealihcrdrg
      181 gslampkdea tnaliadyis nsglfrafig lndmeregqf vyadnsplqn ysnwkqgeph
      241 dpaghedcve mlstgewnds ecqvtiyfvc eflkkrk
//
LOCUS       XP_041326683             107 aa            linear   VRT 06-MAY-2021
DEFINITION  28S ribosomal protein S36, mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041326683
VERSION     XP_041326683.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470749.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..107
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..107
                     /product="28S ribosomal protein S36, mitochondrial"
                     /calculated_mol_wt=11601
     CDS             1..107
                     /gene="MRPS36"
                     /coded_by="XM_041470749.1:52..375"
                     /db_xref="GeneID:121355370"
ORIGIN      
        1 mgskmaaatr avqvvkphtp likfpdrksg prpkiqeslq asmpsllask aqesvggisp
       61 afqnispvsr vqgtpdtsel trtlpqkyrr kqmsdeeiey iqrggpe
//
LOCUS       XP_041326684            1354 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX29 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326684
VERSION     XP_041326684.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470750.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1354
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1354
                     /product="LOW QUALITY PROTEIN: ATP-dependent RNA helicase
                     DHX29"
                     /calculated_mol_wt=152751
     Region          <187..>347
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          555..>1214
                     /region_name="HrpA"
                     /note="HrpA-like RNA helicase [Translation, ribosomal
                     structure and biogenesis]; COG1643"
                     /db_xref="CDD:441249"
     Region          556..737
                     /region_name="DEXHc_DHX29"
                     /note="DEXH-box helicase domain of DEAH-box helicase 29;
                     cd17975"
                     /db_xref="CDD:350733"
     Site            order(556,581..587,624,685..686)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350733"
     Region          1200..1286
                     /region_name="OB_NTP_bind"
                     /note="Oligonucleotide/oligosaccharide-binding (OB)-fold;
                     pfam07717"
                     /db_xref="CDD:400182"
     CDS             1..1354
                     /gene="DHX29"
                     /coded_by="XM_041470750.1:1..4065"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: inserted 1 base in 1 codon"
                     /db_xref="GeneID:121355371"
ORIGIN      
        1 mggrnkkqra ggaahaaaxa aaaepgsrsa pprpapaske prvkqgpkty sfgsttdsna
       61 aanldksvlk vtingnlekr iidvinnhkn qnedkglisk rlsakklqdv ymalqrfsfk
      121 tehieeamkn tllyggdlhs aldwlclnlp ndalpegfsq qfeeqqqkpr akfcsavsqc
      181 gmpphlednk kkengpgtke mnvrkekelt mkewilryae qqsdeekdes vketdeekfd
      241 pnerymhlsa klseakeqas iskqdkdkqg qkaaqekirr iqqemtalee hpvfnpaiki
      301 snqqqnekkk tpspqpqett lnlsllekpd akedkgaake dkgkkrepld irnfdysars
      361 wtgkspkqfl idwcrknfpk spnpafekip vgkywkcrvr iikssddvma mcptivteds
      421 mqaqhlaatl alyhltkgqs vhqllpptyr dvwlewrdie kkkeeeskie tnkprdtfia
      481 kllsklkqqq qlqsesqprl segpedswed lvsdedfssl sletsdadnl epsrilfkkl
      541 qsssryqrll kerqelpvfk hrysivetlk khrvvvvage tgsgkstqvp hflledllld
      601 qgskkcnivc tqprrisavs latrvceelg cesgpggkns lcgyqirmes rtgeatrlly
      661 cttgvllrkl qedgllssis hvivdevher svqsdfllvi lrevlrkrsd lhlilmsatv
      721 dsekfssyfs hcpilrisgr sypveifhve dvievtgyvl ekdseycqkf leeeeevtin
      781 vtvkggnttk hqeyvpiqsg sgidlapyyt kyssrtqqai lymnpykinl elilellayl
      841 drspqfknie gavliflpgl ahiqqlydli stdrrfnlhd rhrlialhsv lstqdqaaaf
      901 tipplgirki vlatniaetg itipdvvfvi dtgrtkenry hessqmssle etfvskasal
      961 qrqgragrvr dgfcfrmytr drfesfmeys vpeilrvple elclhimkcs lgspedflsr
     1021 aldppqqqvi gnamnllrki gacqlnepkl tplgqhlaal pvnvkigkml ifgaifgcld
     1081 pvatlaavmt ekspfttpig rkdeadlaks slamavsdhi tiynaylgwk rarqeggyra
     1141 emtycrrnfl nrtslltled vkqelirvvr aagftapstq cgwdgngatq slslseiall
     1201 kavltaglyd nigkilytks vditeklact vetaqgkaqv hpssvnrdlq tygwllyqek
     1261 vryakvylre ttlispfpil lfggdievqh rerlltvdgw ihfqapvkia vifkqlrvli
     1321 esvlkkklen pkmsleddkv lyiikelikt edgn
//
LOCUS       XP_041326685             355 aa            linear   VRT 06-MAY-2021
DEFINITION  homer protein homolog 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326685
VERSION     XP_041326685.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470751.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="homer protein homolog 1"
                     /calculated_mol_wt=40144
     Region          3..111
                     /region_name="EVH1_Homer_Vesl"
                     /note="Homer/Vesl family proteins EVH1 domain; cd01206"
                     /db_xref="CDD:269917"
     Site            order(24,70,74,89)
                     /site_type="other"
                     /note="proline-rich peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:269917"
     Region          <185..334
                     /region_name="SMC_prok_B"
                     /note="chromosome segregation protein SMC, common
                     bacterial type; TIGR02168"
                     /db_xref="CDD:274008"
     CDS             1..355
                     /gene="HOMER1"
                     /coded_by="XM_041470751.1:122..1189"
                     /db_xref="GeneID:121355372"
ORIGIN      
        1 mgeqpifstr ahvfqidpnt kknwvptskh avtvsyfyds trnvyriisl dgskaiinst
       61 itpnmtftkt sqkfgqwads rantvyglgf ssehhlskfa ekfqefkeaa riakekshek
      121 meltstpsqe saggdiqspl tpesingtdd erampevtqn sepraeptqn alpfthssti
      181 skhweaelat lkgnnaklta allestanvk qwkqqlaayq eeaerlhkrv telecvssqa
      241 navhthktel nqtiqelest lkkkeeeieg lkqeienare lqaqrdsltq klqeveirnk
      301 dlegqlsdle qrleksqneq eafrnnlktl leildgkife ltelrdnlak liecs
//
LOCUS       XP_041326686             404 aa            linear   VRT 06-MAY-2021
DEFINITION  sister chromatid cohesion protein DCC1 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326686
VERSION     XP_041326686.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470752.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..404
                     /product="sister chromatid cohesion protein DCC1 isoform
                     X1"
                     /calculated_mol_wt=45578
     Region          54..368
                     /region_name="Dcc1"
                     /note="Sister chromatid cohesion protein Dcc1; pfam09724"
                     /db_xref="CDD:462857"
     CDS             1..404
                     /gene="DSCC1"
                     /coded_by="XM_041470752.1:21..1235"
                     /db_xref="GeneID:121355373"
ORIGIN      
        1 meavarsser agaamrsrae vdatlqtakl npaellpavh clsfgpqagg geccllqlep
       61 glcaeleagr sliirgekde havlcskdkt ydmkiadtsn mllfvpgckt peelnadqas
      121 cniihsqiag fsknywelrr crpklkklrk llmedpyegp dsqkdqastf skyttedlls
      181 liqaseeeil hqlqvidack iegywrildf dyemkllnhv tqlidseswp lskvplcacl
      241 eelgslepre miehillsyg rkyvddagev ffemhedkic raiaqmllqn avkfnlsefe
      301 evwqqsvpeg mttrldqlqg lalvdkssrp etifllkved lpednqerfn slfgirekwt
      361 evditpyiqd lcaekqtvga lltkyarssm lngvkvynsr rpis
//
LOCUS       XP_041326687             403 aa            linear   VRT 06-MAY-2021
DEFINITION  sister chromatid cohesion protein DCC1 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326687
VERSION     XP_041326687.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470753.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="sister chromatid cohesion protein DCC1 isoform
                     X2"
                     /calculated_mol_wt=45507
     Region          54..367
                     /region_name="Dcc1"
                     /note="Sister chromatid cohesion protein Dcc1; pfam09724"
                     /db_xref="CDD:462857"
     CDS             1..403
                     /gene="DSCC1"
                     /coded_by="XM_041470753.1:21..1232"
                     /db_xref="GeneID:121355373"
ORIGIN      
        1 meavarsser agaamrsrae vdatlqtakl npaellpavh clsfgpqagg geccllqlep
       61 glcaeleagr sliirgekde havlcskdkt ydmkiadtsn mllfvpgckt peelnadqas
      121 cniihsqiag fsknywelrr crpklkklrk llmedpyegp dsqkdqastf skyttedlls
      181 liqaseeeil hqlqvidack iegywrildf dyemkllnhv tqlidseswp lskvplcacl
      241 eelgslepre miehillsyg rkyvddgevf femhedkicr aiaqmllqna vkfnlsefee
      301 vwqqsvpegm ttrldqlqgl alvdkssrpe tifllkvedl pednqerfns lfgirekwte
      361 vditpyiqdl caekqtvgal ltkyarssml ngvkvynsrr pis
//
LOCUS       XP_041326688             279 aa            linear   VRT 06-MAY-2021
DEFINITION  elongation of very long chain fatty acids protein 7 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326688
VERSION     XP_041326688.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470754.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..279
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..279
                     /product="elongation of very long chain fatty acids
                     protein 7"
                     /calculated_mol_wt=33069
     Region          29..269
                     /region_name="ELO"
                     /note="GNS1/SUR4 family; pfam01151"
                     /db_xref="CDD:460083"
     CDS             1..279
                     /gene="ELOVL7"
                     /coded_by="XM_041470754.1:145..984"
                     /db_xref="GeneID:121355374"
ORIGIN      
        1 mafsnltska illydewikd adprlegwpl msspfpttfi igtyvyfvts lgprlmenkk
       61 pfelrqimtf ynfsvvalsl ymtyeflmsg watgysfrcd ivdysrspta lrmvrtcwly
      121 ffskfielld tiffvlrkkn nqvtflhvfh hsimpwtwwf gvkfaagglg tfhallnciv
      181 hvvmytyygi cslgpayhky lwwkkymtti qlvqfimitv higqiyimdd cpyqypifmf
      241 iiwlygsmfl vlflhfwyha ytkgqrlpkm arngiskdq
//
LOCUS       XP_041326689             656 aa            linear   VRT 06-MAY-2021
DEFINITION  syntabulin [Pyrgilauda ruficollis].
ACCESSION   XP_041326689
VERSION     XP_041326689.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470755.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..656
                     /product="syntabulin"
                     /calculated_mol_wt=71881
     Region          206..500
                     /region_name="Syntaphilin"
                     /note="Golgi-localized syntaxin-1-binding clamp;
                     pfam15290"
                     /db_xref="CDD:464617"
     CDS             1..656
                     /gene="SYBU"
                     /coded_by="XM_041470755.1:112..2082"
                     /db_xref="GeneID:121355376"
ORIGIN      
        1 mgplresgke hrtqlekevs rsriprlvlr pqqkvspase spfseeesre fnppsssags
       61 grtissnsfc sddtgcpssq svspvktpsd agnspisfct gsdgdfsrkk fspgsmsegn
      121 tqlarykket ktslvkpgse adfssssstg sisapevhms aagskrssfs rnrgpygrnn
      181 gslsyksgas ppashgkdas salcknhlsp anihqsyras sasssnsgsy kgsdsspvmr
      241 rsgrynscgd nhsikpqnpe qyltplqqke vavrhlktkl kesesklker eteieelkaq
      301 lgrmredwie eecnrveael alkearseik qlkqviesmk nslaekdkki qkyfidiniq
      361 nkklesllqs memaqnhsvr deqcleytsd segkllslca tlpdspited qgleevadsd
      421 lllsedrang sdssgeslpt ttselsdpap fstavneeml eiildgklty cqeeeksnmm
      481 veqaiqtdvv pysldveqli qnifraqdtc plsppsslke lgefslgsfs dsgiivdltp
      541 sdpnsaills pmespcrkve hrvnenrfmk eldftethdd eacyeyvntg ikrrywsssl
      601 lgdllavaap vvptivwals tqrggtdpiy nigallrgcc lvalhslrrt pfnikt
//
LOCUS       XP_041326690             342 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A13 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326690
VERSION     XP_041326690.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470756.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..342
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..342
                     /product="annexin A13 isoform X1"
                     /calculated_mol_wt=37987
     Region          44..109
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          116..181
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          199..265
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          275..340
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..342
                     /gene="ANXA13"
                     /coded_by="XM_041470756.1:1..1029"
                     /db_xref="GeneID:121355377"
ORIGIN      
        1 mgsshsqtyt laedirkpai gatslaadep sahkrhhhgs dteqdakkih sackgagtne
       61 kkiievlssr tsaqrqqikq kykdlyskem eedlkgdlsg nfekavlall dlpceyeare
      121 lrkamkgagt desllieilc trnnkeivni keaykrlfdr dlesdvksdt sgslqkilvm
      181 vleatrdetq qvnaelaeqd asdlykageg rwgteelafn vvlakrsysq lratfqayek
      241 vcgkdieesi ksetsgdlek ayltlvscak dcpgyfatll hksmkgagtd eetlirilvt
      301 raesdlpaik ekfqqmykkp laeavrsdts gdfrklllai lh
//
LOCUS       XP_041326691             317 aa            linear   VRT 06-MAY-2021
DEFINITION  annexin A13 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326691
VERSION     XP_041326691.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470757.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..317
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..317
                     /product="annexin A13 isoform X2"
                     /calculated_mol_wt=35386
     Region          19..84
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          91..156
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          174..240
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     Region          250..315
                     /region_name="Annexin"
                     /note="pfam00191"
                     /db_xref="CDD:395139"
     CDS             1..317
                     /gene="ANXA13"
                     /coded_by="XM_041470757.1:45..998"
                     /db_xref="GeneID:121355377"
ORIGIN      
        1 mgsshsahkr hhhgsdteqd akkihsackg agtnekkiie vlssrtsaqr qqikqkykdl
       61 yskemeedlk gdlsgnfeka vlalldlpce yearelrkam kgagtdesll ieilctrnnk
      121 eivnikeayk rlfdrdlesd vksdtsgslq kilvmvleat rdetqqvnae laeqdasdly
      181 kagegrwgte elafnvvlak rsysqlratf qayekvcgkd ieesiksets gdlekayltl
      241 vscakdcpgy fatllhksmk gagtdeetli rilvtraesd lpaikekfqq mykkplaeav
      301 rsdtsgdfrk lllailh
//
LOCUS       XP_041326692             837 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM91A1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326692
VERSION     XP_041326692.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470758.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..837
                     /product="protein FAM91A1"
                     /calculated_mol_wt=93629
     Region          8..312
                     /region_name="FAM91_N"
                     /note="FAM91 N-terminus; pfam14647"
                     /db_xref="CDD:434094"
     Region          375..823
                     /region_name="FAM91_C"
                     /note="FAM91 C-terminus; pfam14648"
                     /db_xref="CDD:464235"
     CDS             1..837
                     /gene="FAM91A1"
                     /coded_by="XM_041470758.1:158..2671"
                     /db_xref="GeneID:121355378"
ORIGIN      
        1 mnidvefhir hnypwarlpa svrqglgnsq reyerqvvly sirnqlryrn nlvkhvkkde
       61 rkyyedllky srdhlmlypy hlsdimvkgl rvtpfsyytg imedimnsek sydslpnfta
      121 adclrllgig rnqyidlmnq crsskkffrr ktahdllpvk pveiaieaww vvqagyited
      181 dikicttsek saidkiidsg pqlagsldfn vvhslynkgf iyldvpisdd sciavppleg
      241 fvmnrvqgdy fetllykifv sidehtnvae lanvleidls lvknavsmyc rlgfahkkgq
      301 vinldnlhps wknvpsvnrl kstldpqkml lswdsgenrs piqeaassat dtdtnsqddp
      361 aetasvssln lssghtkria flfdstltaf lmmgnlspnl kshavtmfev gklsdeslds
      421 flvelekvqs tgegeaqryf dhaltlrnti lflrhnkdlg aqavqpdqpn ngfpldllrc
      481 esllgldpat csrvlnknyt llvsmapltn eirpissctp qhigpaipev ssvwfklyiy
      541 hitgqgppsl llskgtrlrk lpdvfqgydr llitswghdp gvvptsnvlt mlndalthsa
      601 vliqghgmhg mgetihipfp fdeaeqqgdf srvnmgihta lkilrnkvdl qhfcgyvtml
      661 npssqhanrk lsdasdgrge telasgsdvn gstesfemvi eepsmdsagk qslevpttel
      721 ewvplelcfg iplfsselnq kvcrkiathg lcrkeslqkl lhssrklslq vlnfvhsfqe
      781 gistldqlhd agssssllqp isgdmgvplp aknlmfkegv lsewngwaps svffnht
//
LOCUS       XP_041326694             508 aa            linear   VRT 06-MAY-2021
DEFINITION  poly(A) RNA polymerase GLD2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326694
VERSION     XP_041326694.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470760.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..508
                     /product="poly(A) RNA polymerase GLD2"
                     /calculated_mol_wt=57200
     Region          182..>492
                     /region_name="TRF4"
                     /note="DNA polymerase sigma [Replication, recombination
                     and repair]; COG5260"
                     /db_xref="CDD:227585"
     CDS             1..508
                     /gene="TENT2"
                     /coded_by="XM_041470760.1:233..1759"
                     /db_xref="GeneID:121355379"
ORIGIN      
        1 mfpnssnlgr ppfppkyqrq stfvtklpln mpptvlshqq ivvppfhfrg avlsrallsg
       61 nieaapavtp vvtlqpatsg svspvsksda qasfqgrkrq sqqsvpddak rqrihshdsd
      121 tavvnqavpl pkerrgsfpa svsvqspvlh acgspaltgc lpplqdtlfp dstetrlpva
      181 kdelskqvle lfqacrqqas dldrkelcrt elqreiqlif pqsrlflvgs slngfgtrts
      241 dadlclvike epvnqktear rilsliqklf itklssyier pqlikakvpi vkfrdkvsnv
      301 dfdlnvnnvi girntfllrs yafienrvrp lvlvvkkwas fheindasrg tlnsyslvlm
      361 vlhylqtlpe pilpslqkny pecfdptmql hfvhqaprti ppyvskngss lgdlligffk
      421 yyatefdwch qmisvreaka iarpdgiewr nkficveepf dgtntaravh ekqkfdmirg
      481 elaqawrllq ekkdlnyilp lkafiqkr
//
LOCUS       XP_041326695             999 aa            linear   VRT 06-MAY-2021
DEFINITION  importin-11 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326695
VERSION     XP_041326695.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470761.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..999
                     /product="importin-11 isoform X1"
                     /calculated_mol_wt=114690
     Region          34..>754
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     Site            order(518..519,522,525..526,529,557..558,561,564..565,568,
                     602..603,606,609..610,645..646,649,652..653)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          539..569
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          583..610
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          623..654
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..999
                     /gene="IPO11"
                     /coded_by="XM_041470761.1:66..3065"
                     /db_xref="GeneID:121355380"
ORIGIN      
        1 mlppsaerfl kantsipvpq lpifmdlnsa stvvlqvltq atsqdtavlk paeeqlkqwe
       61 tqpgfysvll niftnhsldv nvrwlavlyf kngidrywrr vaphalseee kttlraglit
      121 nfnepvnqia tqisvliakv arvdcprqwp eliptlvesv kvqddlqqhr alltfyhvtk
      181 tlaskrlaad rklfydltss iysfacslwn hhtdtflqqi ctgdetaaan slertllslk
      241 vlrkltvhgf vephwnaevm gflhaiferl kqflecsrsi raesicrdrl ektiilftkv
      301 lldfldqhpf sftaliqrsl efsvsyvfte agegvvfeqf ivqcmnlikm ivknyaykps
      361 kniedsspet leahkiktaf ftyptlmeic rrlvthyfll tkeemtmwee dpesftveet
      421 ggdswkyslr pctevlfidi fheynqtltp vllemvrslq gstnventna ilikdavyna
      481 vglaayelfd svdfdqwfkn qllaelqvsh drykpirrrv iwligqwvsv kfksdlrpvl
      541 yeaicnllqd rdlvvrieta ttlkltvddf efrtdqflpy lesiftllfq llqevtqcdt
      601 kmhvlhvlsc viervnmqir pyvgclvqyl pllwkqseeh nmlrcailtt lihlvqglga
      661 dsknlypfll pviqlstdvs qpphvylled glelwlvtle nspcltpell rifqnmsall
      721 elssenlknc fkiinayifl ssseflqmya adlcrsfcel lkditiegqv qvlkvvenvl
      781 kvnpvlgpqm fqpllpsvfr giiegerypv vmstylgimg rvllqnarff slllsqmace
      841 lgqeldqilg niiemwvdrm dnitqperrk lsalallsll pslnsviqdk fcgiinvsve
      901 glndvmteds etgtykdcml mshfeepkat edeeppteqd krkkmlalkd pvhtvslqqf
      961 iyeklkaqqe llgeqgfhal metvdteiva qlqeflqgf
//
LOCUS       XP_041326696             975 aa            linear   VRT 06-MAY-2021
DEFINITION  importin-11 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326696
VERSION     XP_041326696.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470762.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..975
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..975
                     /product="importin-11 isoform X2"
                     /calculated_mol_wt=112041
     Region          10..>730
                     /region_name="CSE1"
                     /note="CAS/CSE protein involved in chromosome segregation
                     [Cell division and chromosome partitioning]; COG5657"
                     /db_xref="CDD:227944"
     Site            order(494..495,498,501..502,505,533..534,537,540..541,544,
                     578..579,582,585..586,621..622,625,628..629)
                     /site_type="other"
                     /note="putative peptide binding site [polypeptide
                     binding]"
                     /db_xref="CDD:293787"
     Region          515..545
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          559..586
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     Region          599..630
                     /region_name="HEAT repeat"
                     /note="HEAT repeat [structural motif]"
                     /db_xref="CDD:293787"
     CDS             1..975
                     /gene="IPO11"
                     /coded_by="XM_041470762.1:272..3199"
                     /db_xref="GeneID:121355380"
ORIGIN      
        1 mdlnsastvv lqvltqatsq dtavlkpaee qlkqwetqpg fysvllnift nhsldvnvrw
       61 lavlyfkngi drywrrvaph alseeekttl raglitnfne pvnqiatqis vliakvarvd
      121 cprqwpelip tlvesvkvqd dlqqhrallt fyhvtktlas krlaadrklf ydltssiysf
      181 acslwnhhtd tflqqictgd etaaansler tllslkvlrk ltvhgfveph wnaevmgflh
      241 aiferlkqfl ecsrsiraes icrdrlekti ilftkvlldf ldqhpfsfta liqrslefsv
      301 syvfteageg vvfeqfivqc mnlikmivkn yaykpsknie dsspetleah kiktafftyp
      361 tlmeicrrlv thyflltkee mtmweedpes ftveetggds wkyslrpcte vlfidifhey
      421 nqtltpvlle mvrslqgstn ventnailik davynavgla ayelfdsvdf dqwfknqlla
      481 elqvshdryk pirrrviwli gqwvsvkfks dlrpvlyeai cnllqdrdlv vrietattlk
      541 ltvddfefrt dqflpylesi ftllfqllqe vtqcdtkmhv lhvlscvier vnmqirpyvg
      601 clvqylpllw kqseehnmlr cailttlihl vqglgadskn lypfllpviq lstdvsqpph
      661 vylledglel wlvtlenspc ltpellrifq nmsallelss enlkncfkii nayiflssse
      721 flqmyaadlc rsfcellkdi tiegqvqvlk vvenvlkvnp vlgpqmfqpl lpsvfrgiie
      781 gerypvvmst ylgimgrvll qnarffslll sqmacelgqe ldqilgniie mwvdrmdnit
      841 qperrklsal allsllpsln sviqdkfcgi invsveglnd vmtedsetgt ykdcmlmshf
      901 eepkatedee ppteqdkrkk mlalkdpvht vslqqfiyek lkaqqellge qgfhalmetv
      961 dteivaqlqe flqgf
//
LOCUS       XP_041326697             632 aa            linear   VRT 06-MAY-2021
DEFINITION  leucine-rich repeat-containing protein 70 [Pyrgilauda ruficollis].
ACCESSION   XP_041326697
VERSION     XP_041326697.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470763.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..632
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..632
                     /product="leucine-rich repeat-containing protein 70"
                     /calculated_mol_wt=70556
     Region          32..60
                     /region_name="LRRNT"
                     /note="Leucine rich repeat N-terminal domain; pfam01462"
                     /db_xref="CDD:396168"
     Region          43..61
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          66..121
                     /region_name="LRR_8"
                     /note="Leucine rich repeat; pfam13855"
                     /db_xref="CDD:404697"
     Region          66..86
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          90..110
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          <101..375
                     /region_name="LRR"
                     /note="Leucine-rich repeat (LRR) protein [Transcription];
                     COG4886"
                     /db_xref="CDD:443914"
     Region          111..134
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          135..158
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          159..182
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          183..206
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          207..230
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          231..254
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          255..278
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          279..302
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          303..327
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          328..349
                     /region_name="leucine-rich repeat"
                     /note="leucine-rich repeat [structural motif]"
                     /db_xref="CDD:275380"
     Region          360..399
                     /region_name="LRRCT"
                     /note="Leucine rich repeat C-terminal domain; smart00082"
                     /db_xref="CDD:214507"
     CDS             1..632
                     /gene="LRRC70"
                     /coded_by="XM_041470763.1:378..2276"
                     /db_xref="GeneID:121355381"
ORIGIN      
        1 mcvlqssspc pgaflyifnc flllllpkea fgcppacqlc tgrqvscrna glssipwnlp
       61 ktailvylsg nnishvtpnd lrgflklaal ymdnssisyv hpkafvelpr lcylhlnsnh
      121 ikrldpgife glsnlhclyl qnnqiaflpr glfsdllsvr yltlqrnrls vlgsgtfwgm
      181 islqtlnlan nkisrisdaa fhhlenlayl flegnnlplv psnaigrlkn lerlslshnp
      241 igsiqpfafk glnklkylsl knvklkcvav ngffglnnls qlilsyndle ninsstfill
      301 nnlmylqldr nkiasvgngt fekmgrslkv lnlafnnite lqpevlkplv slthlqvhsn
      361 pwncsckmla llnwlasssv sakihcqhpq smrgrplhym kwawfsncig ptaspgsaps
      421 lgsvrvhhsa ttllmawhkg nrhntleqfv taetkyiafw egttatsstp lpyqeyvvev
      481 psqaatvvst lpvqipaeit panrnveeew lfttdpapvs lktslictqq veklnqafdi
      541 llaffilaca vilfltckii qfrqklkvle nsgeksieyy gfyqpgryni tdsvqsltrk
      601 svehseldqi rllkrtvses qaqvilfehs sl
//
LOCUS       XP_041326698             471 aa            linear   VRT 06-MAY-2021
DEFINITION  vasculin isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326698
VERSION     XP_041326698.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470764.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="vasculin isoform X1"
                     /calculated_mol_wt=52936
     Region          375..455
                     /region_name="Vasculin"
                     /note="Vascular protein family Vasculin-like 1; pfam15337"
                     /db_xref="CDD:464657"
     CDS             1..471
                     /gene="GPBP1"
                     /coded_by="XM_041470764.1:1797..3212"
                     /db_xref="GeneID:121355382"
ORIGIN      
        1 maqhdfapaw lnfptppsst ksslnfekhs enfswtenry eanrrrhnss egldpntgrp
       61 ngghfgrker ngwrsqgrng peninqrggy hgggsrtrss tfhcgkgqgl pensvldnet
      121 hktedkevpn qfeaedfpsl npeyerepnq nkslaagvwe yplnpksrsq rmlvikkgst
      181 kelqisgfpv vgsvhsqpvr ngtgtsvfkg lvpkpvtpsa kptqwksqak enklgnafph
      241 esaygvrsfs pfkstvkafa vtqnavkecn rsnssspvdk sgqlrltklt rmrtdkksef
      301 lktlrrdrvk eehedenhdg qekddesfcl hnsnsphcer dinrnfenei lqengnasit
      361 pqqiiqtsaf pqanvlsssl eaehrllkem gwqedsende tcapltedem refqviseql
      421 qknglrkngi lknglicnfk fspwknstfk palenedset sssdtsdddd v
//
LOCUS       XP_041326699             476 aa            linear   VRT 06-MAY-2021
DEFINITION  vasculin isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326699
VERSION     XP_041326699.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470765.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..476
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..476
                     /product="vasculin isoform X2"
                     /calculated_mol_wt=53637
     Region          380..460
                     /region_name="Vasculin"
                     /note="Vascular protein family Vasculin-like 1; pfam15337"
                     /db_xref="CDD:464657"
     CDS             1..476
                     /gene="GPBP1"
                     /coded_by="XM_041470765.1:1..1431"
                     /db_xref="GeneID:121355382"
ORIGIN      
        1 mtllqpglif llhhhqqrst tyaplqssln fekhsenfsw tenryeanrr rhnssegldp
       61 ntgrpngghf grkerngwrs qgrngpenin qrggyhgggs rtrsstfhcg kgqglpensv
      121 ldnethkted kevpnqfeae dfpslnpeye repnqnksla agvweyplnp ksrsqrmlvi
      181 kkgstkelqi sgfpvvgsvh sqpvrngtgt svfkglvpkp vtpsakptqw ksqakenklg
      241 nafphesayg vrsfspfkst vkafavtqna vkecnrsnss spvdksgqlr ltkltrmrtd
      301 kkseflktlr rdrvkeehed enhdgqekdd esfclhnsns phcerdinrn feneilqeng
      361 nasitpqqii qtsafpqanv lsssleaehr llkemgwqed sendetcapl tedemrefqv
      421 iseqlqkngl rkngilkngl icnfkfspwk nstfkpalen edsetsssdt sddddv
//
LOCUS       XP_041326700            1118 aa            linear   VRT 06-MAY-2021
DEFINITION  A disintegrin and metalloproteinase with thrombospondin motifs 6
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326700
VERSION     XP_041326700.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470766.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1118
                     /product="A disintegrin and metalloproteinase with
                     thrombospondin motifs 6"
                     /calculated_mol_wt=124846
     Region          43..191
                     /region_name="Pep_M12B_propep"
                     /note="Reprolysin family propeptide; pfam01562"
                     /db_xref="CDD:460254"
     Region          251..466
                     /region_name="ZnMc_ADAMTS_like"
                     /note="Zinc-dependent metalloprotease, ADAMTS_like
                     subgroup. ADAMs (A Disintegrin And Metalloprotease) are
                     glycoproteins, which play roles in cell signaling, cell
                     fusion, and cell-cell interactions. This particular
                     subfamily represents domain architectures that...;
                     cd04273"
                     /db_xref="CDD:239801"
     Site            order(404..405,408,414)
                     /site_type="active"
                     /db_xref="CDD:239801"
     Region          481..549
                     /region_name="ADAMTS_CR_2"
                     /note="ADAMTS cysteine-rich domain 2; pfam17771"
                     /db_xref="CDD:465496"
     Region          562..614
                     /region_name="TSP1"
                     /note="Thrombospondin type 1 repeats; smart00209"
                     /db_xref="CDD:214559"
     Region          619..717
                     /region_name="ADAMTS_CR_3"
                     /note="ADAMTS cysteine-rich domain; pfam19236"
                     /db_xref="CDD:437068"
     Region          720..830
                     /region_name="ADAMTS_spacer1"
                     /note="ADAM-TS Spacer 1; pfam05986"
                     /db_xref="CDD:461796"
     Region          845..900
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          904..960
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          964..1018
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1023..1072
                     /region_name="TSP1_ADAMTS"
                     /note="Thrombospondin type 1 domain; pfam19030"
                     /db_xref="CDD:465950"
     Region          1084..1116
                     /region_name="PLAC"
                     /note="PLAC (protease and lacunin) domain; pfam08686"
                     /db_xref="CDD:462560"
     CDS             1..1118
                     /gene="ADAMTS6"
                     /coded_by="XM_041470766.1:472..3828"
                     /db_xref="GeneID:121355384"
ORIGIN      
        1 meifwktwtw ilslvmvsse flsnsrlsys sqeeflsyle hyqltipirv dqngaflsft
       61 vknpkpsrrr rstdpydqel aasklffkls aygkhfhlnl tlntdlvsrh ftveywgkdg
      121 pqwkhdfldh chytgylqdq hstskvalsn cnglhgviat eddeyfiepl rnitedssny
      181 nyenghphvi ykkstmhqqh lydhshcgvs dltrsskpww mndasafpas lpvngtlssh
      241 srqkrsvsle rfvetlvvad kmmvgyhgrk diehyilsvm nivaklyrds slgnvvniiv
      301 trlivltedq pnleinhhad ksldsfckwq ksilshqsdg ntipengiah hdnavlitry
      361 dictyknkpc gtlglasvag mceperscsi nediglgsaf tiaheighnf gmnhdgigns
      421 cgtkgheaak lmaahitant npfswsacsr dyitsfldsg rgtcldnepp krdflypava
      481 pgqvydadeq crfqygatsr qckygevcre lwclsksnrc vtnsipaaeg tlcqtgsiek
      541 gwcyqgecvp fgtwpqsvdg gwgpwsiwge csrtcgggvs ssirhcdspa psgggkyclg
      601 erkryrscnt dpcpsgardf rekqcadfdn mpfrgkyynw kpytgggvkp calnclaegy
      661 nfyterapav idgtqcnads ldicingeck hvgcdnilgs dakedrcrvc ggdgstceai
      721 egffngslpr ggymeviqip rgsvhieire vamsknyial kseeddyyin gawtidwprk
      781 fdvagtafhy krptdepesl ealgptsenl ivmillqeqn lgikykfnvp isrtgsgdne
      841 vgfawnhlpw secsatcagg vqkqevvckr lddssivqnn ycdpdskppe nqracntepc
      901 ppewfigdws ecsktcdggm rsrtvlcirk igpseeetld aanclthrpv ekepcnnqsc
      961 ppqwvaldws ectpkcgpgf khrivlckss dllktfpaaq cqdenkppvr ircslgrcpp
     1021 prwvagdwgq csaqcglgqq mrtvqclsyt gqassecpet lrppsmqqce skcdstpisn
     1081 teeckdvnkv aycplvlkfk fcsrayfrqm ccktcqgh
//
LOCUS       XP_041326701             352 aa            linear   VRT 06-MAY-2021
DEFINITION  CCN family member 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326701
VERSION     XP_041326701.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470767.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..352
                     /product="CCN family member 3"
                     /calculated_mol_wt=38156
     Region          33..98
                     /region_name="IB"
                     /note="Insulin growth factor-binding protein homologues;
                     smart00121"
                     /db_xref="CDD:197525"
     Region          108..168
                     /region_name="VWC"
                     /note="von Willebrand factor (vWF) type C domain;
                     smart00214"
                     /db_xref="CDD:214564"
     Region          203..246
                     /region_name="TSP1_CCN"
                     /note="CCN3 Nov like TSP1 domain; pfam19035"
                     /db_xref="CDD:465952"
     Region          264..333
                     /region_name="CT"
                     /note="C-terminal cystine knot-like domain (CTCK);
                     smart00041"
                     /db_xref="CDD:214482"
     CDS             1..352
                     /gene="CCN3"
                     /coded_by="XM_041470767.1:20..1078"
                     /db_xref="GeneID:121355385"
ORIGIN      
        1 matgggqelp apllllllll lrpcevsgre pacprscggr cpaepprcap gvpavldgcs
       61 cclvcarqrg ercsallpcd essglycdrg pedgaaagic mvlegdncvf dgmiyrnges
      121 fqpsckyqct crdgqigclp rcnldlllpg pdcpfprkve vpgeccekwv cdpddevilg
      181 gfamaayrqe atlgivsdss ancieqttew sacstscgmg fstrvtnrnq qcemvkqtrl
      241 cmirpcenee ssdkkgkkcv rtkksaravr yeyknctsvq ayrprycglc sdgrcctphg
      301 tktiqvhfrc pqgkalkkpm mlintcvchs ncpqsnvvff qpldptssea kl
//
LOCUS       XP_041326702             895 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326702
VERSION     XP_041326702.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470768.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..895
                     /product="oxidation resistance protein 1 isoform X1"
                     /calculated_mol_wt=99365
     Region          <38..156
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          733..895
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..895
                     /gene="OXR1"
                     /coded_by="XM_041470768.1:165..2852"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 milqgftcss avmlpgiitr lkkksqsvdi sgpgcnpvaa eaqtpqpskp lpaaqtaase
       61 eeqdnttntq rrnprrsdlk ryytidagqk ktpdkkdgrr msfqkprgtl eysvesrdtl
      121 nsialkfdtt pnelvqlnkl fsravvpgqi lyvpdpdyis svdsspslsp vsplsptsse
      181 aeldkaavnd sdgvqqkesa vspahacvrp srvvsstsee eeaftekflk inckyitngk
      241 gtvngvllvt pnnimfdphk mdplvqengc eeygimcpme evmsaalyke ivdskikesl
      301 sidveqlsvr elghskkaak sntddtdsrv rdtgndsast aprsteesls edvftesels
      361 pireelvssd elrqdkssga ssesvqtinq tsaecltvis dsneaasdlk psaemvvgvk
      421 qfgthlsses akksvkggqe pgentadvlq qslqrsqgge ehsketevgk dqdsslgkka
      481 dnemeeecpg cedttgsqkk etsskgkvvg eqnqdseaev eelrklwkth tmqqtkqqre
      541 nmhqdsqkei sqkavsagdg rlegssvmke krrhrshkfl clrvgkpmrk tfvsqasatm
      601 qqyaqrdkkh eywfavpqer tdhlyvffiq wspeiyaedt geslrepgfi vvkkkeepet
      661 seesstedaa kewevvsvae yhrridalns eelrtlcrrl qittredtns kqatniktdl
      721 epeafrpnls dpsellqpeq iekltkslpp rtigypwtlv ystakhgmsl ktlyrtmmgl
      781 dtpvllvikd sdgqvfgala sepfkvsdgf ygtgetfmft fspdfevfkw tgdnmffikg
      841 dmdslafggg ggefalwldg dlyhgrshsc ktfgnhtlsk redftiqdie iwafe
//
LOCUS       XP_041326704             881 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326704
VERSION     XP_041326704.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470770.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..881
                     /product="oxidation resistance protein 1 isoform X2"
                     /calculated_mol_wt=97965
     Region          <24..142
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          719..881
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..881
                     /gene="OXR1"
                     /coded_by="XM_041470770.1:155..2800"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 mfgtkrlkkk sqsvdisgpg cnpvaaeaqt pqpskplpaa qtaaseeeqd nttntqrrnp
       61 rrsdlkryyt idagqkktpd kkdgrrmsfq kprgtleysv esrdtlnsia lkfdttpnel
      121 vqlnklfsra vvpgqilyvp dpdyissvds spslspvspl sptsseaeld kaavndsdgv
      181 qqkesavspa hacvrpsrvv sstseeeeaf tekflkinck yitngkgtvn gvllvtpnni
      241 mfdphkmdpl vqengceeyg imcpmeevms aalykeivds kikeslsidv eqlsvrelgh
      301 skkaaksntd dtdsrvrdtg ndsastaprs teeslsedvf teselspire elvssdelrq
      361 dkssgasses vqtinqtsae cltvisdsne aasdlkpsae mvvgvkqfgt hlssesakks
      421 vkggqepgen tadvlqqslq rsqggeehsk etevgkdqds slgkkadnem eeecpgcedt
      481 tgsqkketss kgkvvgeqnq dseaeveelr klwkthtmqq tkqqrenmhq dsqkeisqka
      541 vsagdgrleg ssvmkekrrh rshkflclrv gkpmrktfvs qasatmqqya qrdkkheywf
      601 avpqertdhl yvffiqwspe iyaedtgesl repgfivvkk keepetsees stedaakewe
      661 vvsvaeyhrr idalnseelr tlcrrlqitt redtnskqat niktdlepea frpnlsdpse
      721 llqpeqiekl tkslpprtig ypwtlvysta khgmslktly rtmmgldtpv llvikdsdgq
      781 vfgalasepf kvsdgfygtg etfmftfspd fevfkwtgdn mffikgdmds lafgggggef
      841 alwldgdlyh grshscktfg nhtlskredf tiqdieiwaf e
//
LOCUS       XP_041326705             868 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326705
VERSION     XP_041326705.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470771.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..868
                     /product="oxidation resistance protein 1 isoform X3"
                     /calculated_mol_wt=96155
     Region          <38..156
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          706..868
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..868
                     /gene="OXR1"
                     /coded_by="XM_041470771.1:163..2769"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 milqgftcss avmlpgiitr lkkksqsvdi sgpgcnpvaa eaqtpqpskp lpaaqtaase
       61 eeqdnttntq rrnprrsdlk ryytidagqk ktpdkkdgrr msfqkprgtl eysvesrdtl
      121 nsialkfdtt pnelvqlnkl fsravvpgqi lyvpdpdyis svdsspslsp vsplsptsse
      181 aeldkaavnd sdgvqqkesa vspahacvrp srvvsstsee eeaftekflk inckyitngk
      241 gtvngvllvt pnnimfdphk mdplvqengc eeygimcpme evmsaalyke ivdskikesl
      301 sidveqlsvr elghskkaak sntddtdsrv rdtgndsast aprsteesls edvftesels
      361 pireelvssd elrqdkssga ssesvqtinq tsaecltvis dsneaasdlk psaemvvgvk
      421 qfgthlsses akksvkggqe pgentadvlq qslqrsqgge ehsketevgk dqdsslgkka
      481 dnemeeecpg cedttgsqkk etsskgkvvg eqnqdseaev eelrklwkth tmqqtkqqre
      541 nmhqdsqkei sqkavsagdg rlegssvmke krrhrshkfl clrvgkpmrk tfvsqasatm
      601 qqyaqrdkkh eywfavpqer tdhlyvffiq wspeiyaedt geslrepgfi vvkkkeepet
      661 seesstedaa keweittred tnskqatnik tdlepeafrp nlsdpsellq peqiekltks
      721 lpprtigypw tlvystakhg mslktlyrtm mgldtpvllv ikdsdgqvfg alasepfkvs
      781 dgfygtgetf mftfspdfev fkwtgdnmff ikgdmdslaf gggggefalw ldgdlyhgrs
      841 hscktfgnht lskredftiq dieiwafe
//
LOCUS       XP_041326706             861 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326706
VERSION     XP_041326706.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470772.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..861
                     /product="oxidation resistance protein 1 isoform X4"
                     /calculated_mol_wt=95358
     Region          <43..122
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          699..861
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..861
                     /gene="OXR1"
                     /coded_by="XM_041470772.1:74..2659"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 mdsltaltgk ggrllrgtas rlwgavpggl rhgrcqdgrs rgepgpakpt pdagqkktpd
       61 kkdgrrmsfq kprgtleysv esrdtlnsia lkfdttpnel vqlnklfsra vvpgqilyvp
      121 dpdyissvds spslspvspl sptsseaeld kaavndsdgv qqkesavspa hacvrpsrvv
      181 sstseeeeaf tekflkinck yitngkgtvn gvllvtpnni mfdphkmdpl vqengceeyg
      241 imcpmeevms aalykeivds kikeslsidv eqlsvrelgh skkaaksntd dtdsrvrdtg
      301 ndsastaprs teeslsedvf teselspire elvssdelrq dkssgasses vqtinqtsae
      361 cltvisdsne aasdlkpsae mvvgvkqfgt hlssesakks vkggqepgen tadvlqqslq
      421 rsqggeehsk etevgkdqds slgkkadnem eeecpgcedt tgsqkketss kgkvvgeqnq
      481 dseaeveelr klwkthtmqq tkqqrenmhq dsqkeisqka vsagdgrleg ssvmkekrrh
      541 rshkflclrv gkpmrktfvs qasatmqqya qrdkkheywf avpqertdhl yvffiqwspe
      601 iyaedtgesl repgfivvkk keepetsees stedaakewe vvsvaeyhrr idalnseelr
      661 tlcrrlqitt redtnskqat niktdlepea frpnlsdpse llqpeqiekl tkslpprtig
      721 ypwtlvysta khgmslktly rtmmgldtpv llvikdsdgq vfgalasepf kvsdgfygtg
      781 etfmftfspd fevfkwtgdn mffikgdmds lafgggggef alwldgdlyh grshscktfg
      841 nhtlskredf tiqdieiwaf e
//
LOCUS       XP_041326707             819 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X5 [Pyrgilauda ruficollis].
ACCESSION   XP_041326707
VERSION     XP_041326707.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470773.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..819
                     /product="oxidation resistance protein 1 isoform X5"
                     /calculated_mol_wt=91251
     Region          657..819
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..819
                     /gene="OXR1"
                     /coded_by="XM_041470773.1:165..2624"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 milqgftcss avmlpgiitr lkkksqsvdi sgpgcnpvaa eaqtpqpskp lpaaqtaase
       61 eeqdnttntq rrnprrsdlk ryytidagqk ktpdkkdgrr msfqkprgtl eysdsdgvqq
      121 kesavspaha cvrpsrvvss tseeeeafte kflkinckyi tngkgtvngv llvtpnnimf
      181 dphkmdplvq engceeygim cpmeevmsaa lykeivdski keslsidveq lsvrelghsk
      241 kaaksntddt dsrvrdtgnd sastaprste eslsedvfte selspireel vssdelrqdk
      301 ssgassesvq tinqtsaecl tvisdsneaa sdlkpsaemv vgvkqfgthl ssesakksvk
      361 ggqepgenta dvlqqslqrs qggeehsket evgkdqdssl gkkadnemee ecpgcedttg
      421 sqkketsskg kvvgeqnqds eaeveelrkl wkthtmqqtk qqrenmhqds qkeisqkavs
      481 agdgrlegss vmkekrrhrs hkflclrvgk pmrktfvsqa satmqqyaqr dkkheywfav
      541 pqertdhlyv ffiqwspeiy aedtgeslre pgfivvkkke epetseesst edaakewevv
      601 svaeyhrrid alnseelrtl crrlqittre dtnskqatni ktdlepeafr pnlsdpsell
      661 qpeqiekltk slpprtigyp wtlvystakh gmslktlyrt mmgldtpvll vikdsdgqvf
      721 galasepfkv sdgfygtget fmftfspdfe vfkwtgdnmf fikgdmdsla fgggggefal
      781 wldgdlyhgr shscktfgnh tlskredfti qdieiwafe
//
LOCUS       XP_041326708             785 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326708
VERSION     XP_041326708.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470774.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..785
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..785
                     /product="oxidation resistance protein 1 isoform X6"
                     /calculated_mol_wt=87243
     Region          623..785
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..785
                     /gene="OXR1"
                     /coded_by="XM_041470774.1:74..2431"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 mdsltaltgk ggrllrgtas rlwgavpggl rhgrcqdgrs rgepgpakpt pdagqkktpd
       61 kkdgrrmsfq kprgtleysd sdgvqqkesa vspahacvrp srvvsstsee eeaftekflk
      121 inckyitngk gtvngvllvt pnnimfdphk mdplvqengc eeygimcpme evmsaalyke
      181 ivdskikesl sidveqlsvr elghskkaak sntddtdsrv rdtgndsast aprsteesls
      241 edvftesels pireelvssd elrqdkssga ssesvqtinq tsaecltvis dsneaasdlk
      301 psaemvvgvk qfgthlsses akksvkggqe pgentadvlq qslqrsqgge ehsketevgk
      361 dqdsslgkka dnemeeecpg cedttgsqkk etsskgkvvg eqnqdseaev eelrklwkth
      421 tmqqtkqqre nmhqdsqkei sqkavsagdg rlegssvmke krrhrshkfl clrvgkpmrk
      481 tfvsqasatm qqyaqrdkkh eywfavpqer tdhlyvffiq wspeiyaedt geslrepgfi
      541 vvkkkeepet seesstedaa kewevvsvae yhrridalns eelrtlcrrl qittredtns
      601 kqatniktdl epeafrpnls dpsellqpeq iekltkslpp rtigypwtlv ystakhgmsl
      661 ktlyrtmmgl dtpvllvikd sdgqvfgala sepfkvsdgf ygtgetfmft fspdfevfkw
      721 tgdnmffikg dmdslafggg ggefalwldg dlyhgrshsc ktfgnhtlsk redftiqdie
      781 iwafe
//
LOCUS       XP_041326709             881 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326709
VERSION     XP_041326709.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470775.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..881
                     /product="oxidation resistance protein 1 isoform X2"
                     /calculated_mol_wt=97965
     Region          <24..142
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          719..881
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..881
                     /gene="OXR1"
                     /coded_by="XM_041470775.1:80..2725"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 mfgtkrlkkk sqsvdisgpg cnpvaaeaqt pqpskplpaa qtaaseeeqd nttntqrrnp
       61 rrsdlkryyt idagqkktpd kkdgrrmsfq kprgtleysv esrdtlnsia lkfdttpnel
      121 vqlnklfsra vvpgqilyvp dpdyissvds spslspvspl sptsseaeld kaavndsdgv
      181 qqkesavspa hacvrpsrvv sstseeeeaf tekflkinck yitngkgtvn gvllvtpnni
      241 mfdphkmdpl vqengceeyg imcpmeevms aalykeivds kikeslsidv eqlsvrelgh
      301 skkaaksntd dtdsrvrdtg ndsastaprs teeslsedvf teselspire elvssdelrq
      361 dkssgasses vqtinqtsae cltvisdsne aasdlkpsae mvvgvkqfgt hlssesakks
      421 vkggqepgen tadvlqqslq rsqggeehsk etevgkdqds slgkkadnem eeecpgcedt
      481 tgsqkketss kgkvvgeqnq dseaeveelr klwkthtmqq tkqqrenmhq dsqkeisqka
      541 vsagdgrleg ssvmkekrrh rshkflclrv gkpmrktfvs qasatmqqya qrdkkheywf
      601 avpqertdhl yvffiqwspe iyaedtgesl repgfivvkk keepetsees stedaakewe
      661 vvsvaeyhrr idalnseelr tlcrrlqitt redtnskqat niktdlepea frpnlsdpse
      721 llqpeqiekl tkslpprtig ypwtlvysta khgmslktly rtmmgldtpv llvikdsdgq
      781 vfgalasepf kvsdgfygtg etfmftfspd fevfkwtgdn mffikgdmds lafgggggef
      841 alwldgdlyh grshscktfg nhtlskredf tiqdieiwaf e
//
LOCUS       XP_041326710             243 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X7 [Pyrgilauda ruficollis].
ACCESSION   XP_041326710
VERSION     XP_041326710.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470776.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..243
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..243
                     /product="oxidation resistance protein 1 isoform X7"
                     /calculated_mol_wt=27602
     Region          81..243
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..243
                     /gene="OXR1"
                     /coded_by="XM_041470776.1:110..841"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 msrlwygkkg rkhqpvnrkh tlvvsvaeyh rridalnsee lrtlcrrlqi ttredtnskq
       61 atniktdlep eafrpnlsdp sellqpeqie kltkslpprt igypwtlvys takhgmslkt
      121 lyrtmmgldt pvllvikdsd gqvfgalase pfkvsdgfyg tgetfmftfs pdfevfkwtg
      181 dnmffikgdm dslafggggg efalwldgdl yhgrshsckt fgnhtlskre dftiqdieiw
      241 afe
//
LOCUS       XP_041326711             216 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326711
VERSION     XP_041326711.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470777.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..216
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..216
                     /product="oxidation resistance protein 1 isoform X8"
                     /calculated_mol_wt=24393
     Region          54..216
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..216
                     /gene="OXR1"
                     /coded_by="XM_041470777.1:50..700"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 msrlwygkkg rkhqpvnrkh tlittredtn skqatniktd lepeafrpnl sdpsellqpe
       61 qiekltkslp prtigypwtl vystakhgms lktlyrtmmg ldtpvllvik dsdgqvfgal
      121 asepfkvsdg fygtgetfmf tfspdfevfk wtgdnmffik gdmdslafgg gggefalwld
      181 gdlyhgrshs cktfgnhtls kredftiqdi eiwafe
//
LOCUS       XP_041326712             834 aa            linear   VRT 06-MAY-2021
DEFINITION  oxidation resistance protein 1 isoform X9 [Pyrgilauda ruficollis].
ACCESSION   XP_041326712
VERSION     XP_041326712.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470778.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..834
                     /product="oxidation resistance protein 1 isoform X9"
                     /calculated_mol_wt=92148
     Region          <43..122
                     /region_name="LysM"
                     /note="LysM repeat [Cell wall/membrane/envelope
                     biogenesis]; COG1388"
                     /db_xref="CDD:440998"
     Region          672..834
                     /region_name="TLDc"
                     /note="domain in TBC and LysM domain containing proteins;
                     smart00584"
                     /db_xref="CDD:214733"
     CDS             1..834
                     /gene="OXR1"
                     /coded_by="XM_041470778.1:74..2578"
                     /db_xref="GeneID:121355386"
ORIGIN      
        1 mdsltaltgk ggrllrgtas rlwgavpggl rhgrcqdgrs rgepgpakpt pdagqkktpd
       61 kkdgrrmsfq kprgtleysv esrdtlnsia lkfdttpnel vqlnklfsra vvpgqilyvp
      121 dpdyissvds spslspvspl sptsseaeld kaavndsdgv qqkesavspa hacvrpsrvv
      181 sstseeeeaf tekflkinck yitngkgtvn gvllvtpnni mfdphkmdpl vqengceeyg
      241 imcpmeevms aalykeivds kikeslsidv eqlsvrelgh skkaaksntd dtdsrvrdtg
      301 ndsastaprs teeslsedvf teselspire elvssdelrq dkssgasses vqtinqtsae
      361 cltvisdsne aasdlkpsae mvvgvkqfgt hlssesakks vkggqepgen tadvlqqslq
      421 rsqggeehsk etevgkdqds slgkkadnem eeecpgcedt tgsqkketss kgkvvgeqnq
      481 dseaeveelr klwkthtmqq tkqqrenmhq dsqkeisqka vsagdgrleg ssvmkekrrh
      541 rshkflclrv gkpmrktfvs qasatmqqya qrdkkheywf avpqertdhl yvffiqwspe
      601 iyaedtgesl repgfivvkk keepetsees stedaakewe ittredtnsk qatniktdle
      661 peafrpnlsd psellqpeqi ekltkslppr tigypwtlvy stakhgmslk tlyrtmmgld
      721 tpvllvikds dgqvfgalas epfkvsdgfy gtgetfmftf spdfevfkwt gdnmffikgd
      781 mdslafgggg gefalwldgd lyhgrshsck tfgnhtlskr edftiqdiei wafe
//
LOCUS       XP_041326713             409 aa            linear   VRT 06-MAY-2021
DEFINITION  actin-binding Rho-activating protein [Pyrgilauda ruficollis].
ACCESSION   XP_041326713
VERSION     XP_041326713.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470779.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..409
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..409
                     /product="actin-binding Rho-activating protein"
                     /calculated_mol_wt=46482
     Region          333..408
                     /region_name="Costars"
                     /note="pfam14705"
                     /db_xref="CDD:464274"
     CDS             1..409
                     /gene="ABRA"
                     /coded_by="XM_041470779.1:101..1330"
                     /db_xref="GeneID:121355387"
ORIGIN      
        1 maadssmape ekpstapvkr avhkirmasq vfslargwqq wasdhhvkqe qepsgwvpsa
       61 vnssaqpvqe ssfekwqips vkrdqekdde kslskdsvti rdaekksres dedlemfsik
      121 skevtktvvs kayerggdvs llseryennn sssemtklke essaidkils nklpstirrk
      181 csnvvseltk gwekmededk dgakrelllk chddsldaqd sgygeaedkl eqddsdrevt
      241 avrikrpvps lasrlseear snarrkcsav hslkdrwqew adqhiitqkl npfseefdhe
      301 lamstrlhkg degyghpkeg tktaerakra eahihreird mcfiiesmak prpdgkiqvt
      361 fgelfdryvr isdkvvgilm rarkhglvdf egemlwqgrd dnviitllk
//
LOCUS       XP_041326715             316 aa            linear   VRT 06-MAY-2021
DEFINITION  transmembrane protein 74 [Pyrgilauda ruficollis].
ACCESSION   XP_041326715
VERSION     XP_041326715.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470781.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..316
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..316
                     /product="transmembrane protein 74"
                     /calculated_mol_wt=34080
     CDS             1..316
                     /gene="TMEM74"
                     /coded_by="XM_041470781.1:208..1158"
                     /db_xref="GeneID:121355389"
ORIGIN      
        1 macmellyla eesrqvplvt atgwslpphp yeqqqcegge vdpraatava alhcerhckp
       61 lqrgrvaepp lapqpsslgs spqehpalss tsqpchpaec lpgeedggkk kacccaqele
      121 tsftyvdenv nleharspps ptggqdaplq hhscrelppe wahdspslvs eeddaaseaa
      181 agksvdygfi sailflvsgi llviisyvvp rdvtvdpntv aaremerlei esarigahld
      241 rcviaglcll tlggvvlssl lmmsmwkgel yrrsrfassk esaklygsfn frmksgandn
      301 mlelslveed vlaidn
//
LOCUS       XP_041326716             617 aa            linear   VRT 06-MAY-2021
DEFINITION  probable ATP-dependent RNA helicase DDX4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326716
VERSION     XP_041326716.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470782.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..617
                     /product="probable ATP-dependent RNA helicase DDX4"
                     /calculated_mol_wt=67692
     Region          148..411
                     /region_name="DEADc_DDX4"
                     /note="DEAD-box helicase domain of DEAD box protein 4;
                     cd18052"
                     /db_xref="CDD:350810"
     Site            order(170,180,192,210,212..214,217,235..241,348..349,384)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350810"
     Site            order(275..277,303..304,324..327,330,352,358)
                     /site_type="other"
                     /note="RNA binding site [nucleotide binding]"
                     /db_xref="CDD:350810"
     Region          417..546
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(505,507,532,535..536)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     CDS             1..617
                     /gene="DDX4"
                     /coded_by="XM_041470782.1:85..1938"
                     /db_xref="GeneID:121355390"
ORIGIN      
        1 meedwnaeig deallpslek vsllerpndt ssvfnssvds fgadefvnsq hqpgssfgrg
       61 rnfaakgfqe gieedattqn rgfkgfgqgf qernavdgag tqnrgfkgfr ggfgqgargr
      121 qrdipqsgtp dsrergiltd gagpkvtyvp ppppddeqai fahyqtgmnf dkydenvvev
      181 sgldppaalm sfadtnmcht ltvniakagy skptpvqkys ipiilagrdl macaqtgsgk
      241 taaflvpiva qmmrdgvtas sfkeqqepec iiiaptreli nqiflearkf vygtcirpvv
      301 iyggtqtdys irqvkqgcni lcatpgrlld iigrgkiglh nvkylvldea drmldmgfga
      361 dmkklvsvpd ipqkdkrqtl mfsatfpeev qrlaceflkt dflfvvvghv ggacsdvqqn
      421 ilqvsqsfkr dklieilhsi gnertlvfvd tkkkadfiac flcqesipat sihgdreqre
      481 reialrdfrs gkcpvlvats vaargldien vqhvinfdlp stieeyvhri grtgrcgntg
      541 kavgffdnns dghlaqplik vlsdaqqevp vwltevafea eggrlpvhtq knyrgrgnmn
      601 agevkmdcsa reieswd
//
LOCUS       XP_041326717             575 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF180 [Pyrgilauda ruficollis].
ACCESSION   XP_041326717
VERSION     XP_041326717.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470783.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..575
                     /product="E3 ubiquitin-protein ligase RNF180"
                     /calculated_mol_wt=65472
     Region          401..459
                     /region_name="RING-HC_RNF180"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 180 (RNF180) and similar proteins; cd16554"
                     /db_xref="CDD:438216"
     Region          464..>540
                     /region_name="RNF180_C"
                     /note="E3 ubiquitin-protein ligase RNF180 C-terminus;
                     pfam19332"
                     /db_xref="CDD:437164"
     CDS             1..575
                     /gene="RNF180"
                     /coded_by="XM_041470783.1:1..1728"
                     /db_xref="GeneID:121355391"
ORIGIN      
        1 mnnqeagvlc cwrcrkyian svflakcngk kaskisqpsa agqnsynvwh vnleaipewv
       61 kcviekaqwt igklhcpfce aclggfnfvc nkecscgqlv nihffktwte dqppfsvnls
      121 essekhlllk iqsgfnkdtc hevvtatlei inqglsytar snngagrlte alclevrapr
      181 yeienkklpl kalnqkrnfp ssypikdact vkpfhrrscs lvlnirerlv lspvlyetgc
      241 mgtlycgqng nppayvqgsl qsessrkdgs sfqdlyssrd dilqnqfqvt sittllhrdt
      301 esecdfegtg qssgsviadg spfvvnlssp travadkqyi tpgslvqpms isfnqklskr
      361 ernkskslrr kqrrreqylq kqpandnlht ddehelrgdr esylcavcld vyfnpymcyp
      421 chhifcepcl rmlakdnpas tpcplcrtti arvffqtdln nstrsffpme ylnlkenfqk
      481 snfakwplps ckkafrvfea gfrrrsntvt rrhfphaahr mdymdfedds rgwrfdmdmv
      541 fpgsfcqkss vgmvwiltys dneefsvlvl lvkti
//
LOCUS       XP_041326718             471 aa            linear   VRT 06-MAY-2021
DEFINITION  protein FAM83A [Pyrgilauda ruficollis].
ACCESSION   XP_041326718
VERSION     XP_041326718.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470784.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..471
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..471
                     /product="protein FAM83A"
                     /calculated_mol_wt=53312
     Region          55..330
                     /region_name="PLDc_FAM83A_N"
                     /note="N-terminal phospholipase D-like domain of the
                     uncharacterized protein, Family with sequence similarity
                     83A; cd09181"
                     /db_xref="CDD:197278"
     CDS             1..471
                     /gene="FAM83A"
                     /coded_by="XM_041470784.1:647..2062"
                     /db_xref="GeneID:121355392"
ORIGIN      
        1 mqssnkkddc tacgthmhga cpadrllrqr amnhprhmgk irkrledikn qspkltkvdf
       61 shnesirlat dafldggtds ylqtlskege vdflssveaq yikdnaresy yaqespgadg
      121 aaapkqndag slpsgtyfpt isdssepall htwitaekpy lkekstatvy fqteknsnir
      181 diirryihkt tqvlaivmdv ftdteilcdl leaankrmvf vyllldhssi dlfsemcdkl
      241 qisedlfkni svrsvtgevy caksgrkfsg qiqekflicd wryvlsgsys ftwlcgqvhr
      301 nllskftgqv velfdeefrh lyalskpvrg pktpprslpf lfsrswappr slpysdegsa
      361 ntlsdpfssl sagsthqskq tprtlmfnsn fspqsplqrv nsfhsyvsft ppppqnaiqp
      421 nyyqphymae nstvpynnmn iyrpirlrqe epnrtglsss wrclhkanlf a
//
LOCUS       XP_041326719             817 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF19A [Pyrgilauda ruficollis].
ACCESSION   XP_041326719
VERSION     XP_041326719.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470785.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..817
                     /product="E3 ubiquitin-protein ligase RNF19A"
                     /calculated_mol_wt=87698
     Region          111..166
                     /region_name="RING-HC_RBR_RNF19A"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 19A (RNF19A) and similar proteins; cd16775"
                     /db_xref="CDD:438431"
     Region          172..254
                     /region_name="BRcat_RBR_RNF19A"
                     /note="BRcat domain found in RING finger protein 19A
                     (RNF19A); cd20362"
                     /db_xref="CDD:439023"
     Region          276..344
                     /region_name="Rcat_RBR_RNF19"
                     /note="Rcat domain found in the RING finger protein 19
                     (RNF19) subfamily; cd20355"
                     /db_xref="CDD:439016"
     CDS             1..817
                     /gene="RNF19A"
                     /coded_by="XM_041470785.1:418..2871"
                     /db_xref="GeneID:121355393"
ORIGIN      
        1 mkfnpflmsd ldmslhrqmg sdrdlqssas svslpsvkka pkkrrislgs lfrrkkdtkr
       61 ksrdlnggvd giasiesihs emctdknsif stctssdngt tssnkpsgdf mecplcllrh
      121 skdrfpeimt chhrscvdcl rqylrieise srvniscpec serfnphdir lilnddilme
      181 kyeefmlrrw lvadpdcrwc papdcgyavi afgcascpkl tcgregcgte fcyhckqiwh
      241 pnqtcdaarq eraqslrlrt irsssisysq esgaaaddik pcprcaayii kmndgscnhm
      301 tcavcgcefc wlcmkeisdl hylspsgctf wgkkpwsrkk kilwqlgtlv gapvgialia
      361 giaipamiig ipvyvgrkih nryegkdisk hkrnlaiagg vtlsvivspv vaavtvgigv
      421 pimlayvygv vpislcrsgg cgvsagngkg vriefddend invggtnaav dttsvaearh
      481 npsigegsvg gltgslsasg shmdrigair dnlsetastm alagasitgs lsgsamvncf
      541 nrlevqadvq keryslsges gtvslgtvsd nastkamags ilnsyipldr egnslevqvd
      601 ieskpakfrh hsgsssveeg gaagrgsagg sgppegkaga akwskdstag kkckgklrkk
      661 ssmkinetre dmdaqlleqq stnssefdsp slsdsipsva dshsshfsef scsdmesmkt
      721 scshgssdyh trfttvsvlp evendrlens pqpsgipvpv paapstdvpq lsyiaeesin
      781 ngsstdadlg vgetlketnn nhsqqavels taiqtem
//
LOCUS       XP_041326720             817 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF19A [Pyrgilauda ruficollis].
ACCESSION   XP_041326720
VERSION     XP_041326720.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470786.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..817
                     /product="E3 ubiquitin-protein ligase RNF19A"
                     /calculated_mol_wt=87698
     Region          111..166
                     /region_name="RING-HC_RBR_RNF19A"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 19A (RNF19A) and similar proteins; cd16775"
                     /db_xref="CDD:438431"
     Region          172..254
                     /region_name="BRcat_RBR_RNF19A"
                     /note="BRcat domain found in RING finger protein 19A
                     (RNF19A); cd20362"
                     /db_xref="CDD:439023"
     Region          276..344
                     /region_name="Rcat_RBR_RNF19"
                     /note="Rcat domain found in the RING finger protein 19
                     (RNF19) subfamily; cd20355"
                     /db_xref="CDD:439016"
     CDS             1..817
                     /gene="RNF19A"
                     /coded_by="XM_041470786.1:520..2973"
                     /db_xref="GeneID:121355393"
ORIGIN      
        1 mkfnpflmsd ldmslhrqmg sdrdlqssas svslpsvkka pkkrrislgs lfrrkkdtkr
       61 ksrdlnggvd giasiesihs emctdknsif stctssdngt tssnkpsgdf mecplcllrh
      121 skdrfpeimt chhrscvdcl rqylrieise srvniscpec serfnphdir lilnddilme
      181 kyeefmlrrw lvadpdcrwc papdcgyavi afgcascpkl tcgregcgte fcyhckqiwh
      241 pnqtcdaarq eraqslrlrt irsssisysq esgaaaddik pcprcaayii kmndgscnhm
      301 tcavcgcefc wlcmkeisdl hylspsgctf wgkkpwsrkk kilwqlgtlv gapvgialia
      361 giaipamiig ipvyvgrkih nryegkdisk hkrnlaiagg vtlsvivspv vaavtvgigv
      421 pimlayvygv vpislcrsgg cgvsagngkg vriefddend invggtnaav dttsvaearh
      481 npsigegsvg gltgslsasg shmdrigair dnlsetastm alagasitgs lsgsamvncf
      541 nrlevqadvq keryslsges gtvslgtvsd nastkamags ilnsyipldr egnslevqvd
      601 ieskpakfrh hsgsssveeg gaagrgsagg sgppegkaga akwskdstag kkckgklrkk
      661 ssmkinetre dmdaqlleqq stnssefdsp slsdsipsva dshsshfsef scsdmesmkt
      721 scshgssdyh trfttvsvlp evendrlens pqpsgipvpv paapstdvpq lsyiaeesin
      781 ngsstdadlg vgetlketnn nhsqqavels taiqtem
//
LOCUS       XP_041326721             817 aa            linear   VRT 06-MAY-2021
DEFINITION  E3 ubiquitin-protein ligase RNF19A [Pyrgilauda ruficollis].
ACCESSION   XP_041326721
VERSION     XP_041326721.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470787.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..817
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..817
                     /product="E3 ubiquitin-protein ligase RNF19A"
                     /calculated_mol_wt=87698
     Region          111..166
                     /region_name="RING-HC_RBR_RNF19A"
                     /note="RING finger, HC subclass, found in RING finger
                     protein 19A (RNF19A) and similar proteins; cd16775"
                     /db_xref="CDD:438431"
     Region          172..254
                     /region_name="BRcat_RBR_RNF19A"
                     /note="BRcat domain found in RING finger protein 19A
                     (RNF19A); cd20362"
                     /db_xref="CDD:439023"
     Region          276..344
                     /region_name="Rcat_RBR_RNF19"
                     /note="Rcat domain found in the RING finger protein 19
                     (RNF19) subfamily; cd20355"
                     /db_xref="CDD:439016"
     CDS             1..817
                     /gene="RNF19A"
                     /coded_by="XM_041470787.1:323..2776"
                     /db_xref="GeneID:121355393"
ORIGIN      
        1 mkfnpflmsd ldmslhrqmg sdrdlqssas svslpsvkka pkkrrislgs lfrrkkdtkr
       61 ksrdlnggvd giasiesihs emctdknsif stctssdngt tssnkpsgdf mecplcllrh
      121 skdrfpeimt chhrscvdcl rqylrieise srvniscpec serfnphdir lilnddilme
      181 kyeefmlrrw lvadpdcrwc papdcgyavi afgcascpkl tcgregcgte fcyhckqiwh
      241 pnqtcdaarq eraqslrlrt irsssisysq esgaaaddik pcprcaayii kmndgscnhm
      301 tcavcgcefc wlcmkeisdl hylspsgctf wgkkpwsrkk kilwqlgtlv gapvgialia
      361 giaipamiig ipvyvgrkih nryegkdisk hkrnlaiagg vtlsvivspv vaavtvgigv
      421 pimlayvygv vpislcrsgg cgvsagngkg vriefddend invggtnaav dttsvaearh
      481 npsigegsvg gltgslsasg shmdrigair dnlsetastm alagasitgs lsgsamvncf
      541 nrlevqadvq keryslsges gtvslgtvsd nastkamags ilnsyipldr egnslevqvd
      601 ieskpakfrh hsgsssveeg gaagrgsagg sgppegkaga akwskdstag kkckgklrkk
      661 ssmkinetre dmdaqlleqq stnssefdsp slsdsipsva dshsshfsef scsdmesmkt
      721 scshgssdyh trfttvsvlp evendrlens pqpsgipvpv paapstdvpq lsyiaeesin
      781 ngsstdadlg vgetlketnn nhsqqavels taiqtem
//
LOCUS       XP_041326722            1161 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc finger SWIM domain-containing protein 6 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326722
VERSION     XP_041326722.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470788.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1161
                     /product="zinc finger SWIM domain-containing protein 6"
                     /calculated_mol_wt=129755
     Region          153..>279
                     /region_name="SWIM"
                     /note="Uncharacterized protein, contains SWIM-type Zn
                     finger domain [Function unknown]; COG4715"
                     /db_xref="CDD:443750"
     CDS             1..1161
                     /gene="ZSWIM6"
                     /coded_by="XM_041470788.1:42..3527"
                     /db_xref="GeneID:121355395"
ORIGIN      
        1 maergqlphp akrlccrpgy gsgcrpgqra ggsgpgggal cagpssaaaa aalgllplgk
       61 tqspeslldi aarkvaekwp fqrveerfer ipepvqrriv ywsfprsere icmyssfntg
      121 aedpaagpgg aaapggamda aaaaaadenr lpfrrgiall dggcvdnvlq vgfhlsgtvt
      181 epamqsepet vcnvaisfdr ckitsvtcsc gnkdifycah vvalslyrir kpdqvklhlp
      241 isetlfqmnr dqlqkfvqyl itvhhtevlp taqkladeil sqnseinqvh gapdptagas
      301 iddencwhld eeqvqeqvkl flsqggyhgs gkqlnllfak vremlkmrds ngarmltlit
      361 eqfmadprls lwrqqgttmt dkyrqlwdel galwmcivln phckleqkss wlkqlkkwns
      421 vdvcpwedgn hgnelpnltn alpqgananq dssnrphrtv ftraieacdl hwqdshlqhi
      481 issdlytnyc yhddtenllf dsqgwplwhe hvptacarvd alrshgypre alrlaiaivn
      541 tlrrqqqkql emfraqkkel lhrgvtsitn legwvghpld pigtlfgslm eacrvdddsf
      601 hgfsdftenl gqcksleyqh lpahkfleeg esyltlavev aliglgqqri mpdglyaqek
      661 vcrneeqlis klqeielddt lvkifrkqav flleggpysg lgevihresv pmhtfakylf
      721 tsllphdael ayktalramr llvlestaps gdlsrphhia svvpnryprw ftlshiesqq
      781 celastmlta akgdvrrlet vlesiqknih ssshifklaq dafkiatlmd slpditllkv
      841 slelglqvmr mtlstlnwrr remvrwlvtc atevgvyald simqnwftlf tpteatsiva
      901 ttvmsnstiv rlhldchqqe klagsartla lqcamkdpqn calsaltlce kdhiafetay
      961 qivldaatag msysqlftia rymehrgypm rayklatlam thlnlsynqd thpaindvlw
     1021 acalshslgk nelaaiiplv vksvkcatvl sdilrrctlt tpgmvglhgr rnsgklmsld
     1081 kaplrqllda tigayintth srlthisprh ysefieflsk aretflmahd ghiqftqfid
     1141 nlkqiykgkk klmmlvrerf g
//
LOCUS       XP_041326723             213 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-binding cancer antigen expressed on SiSo cells [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326723
VERSION     XP_041326723.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470789.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..213
                     /product="receptor-binding cancer antigen expressed on
                     SiSo cells"
                     /calculated_mol_wt=24111
     Region          <160..203
                     /region_name="CCDC47"
                     /note="PAT complex subunit CCDC47; cl46382"
                     /db_xref="CDD:480722"
     CDS             1..213
                     /gene="EBAG9"
                     /coded_by="XM_041470789.1:179..820"
                     /db_xref="GeneID:121355396"
ORIGIN      
        1 maitqfrlfk vctclaavls fikklicrsg rgrklsgdqi tlpttvdyss vpkqpevedw
       61 sswdedapts vkieggngnv aaqqnsleqm epdyfkdmap tirktqkivi kkreplnfgi
      121 pegntgfssr laatqdipfi hqspelgdld twqentnawe eeedaawqae evlrqqkiae
      181 rekraaeqqr kkmekeaqrl mkkeqnkigv kls
//
LOCUS       XP_041326724             213 aa            linear   VRT 06-MAY-2021
DEFINITION  receptor-binding cancer antigen expressed on SiSo cells [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326724
VERSION     XP_041326724.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470790.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..213
                     /product="receptor-binding cancer antigen expressed on
                     SiSo cells"
                     /calculated_mol_wt=24111
     Region          <160..203
                     /region_name="CCDC47"
                     /note="PAT complex subunit CCDC47; cl46382"
                     /db_xref="CDD:480722"
     CDS             1..213
                     /gene="EBAG9"
                     /coded_by="XM_041470790.1:356..997"
                     /db_xref="GeneID:121355396"
ORIGIN      
        1 maitqfrlfk vctclaavls fikklicrsg rgrklsgdqi tlpttvdyss vpkqpevedw
       61 sswdedapts vkieggngnv aaqqnsleqm epdyfkdmap tirktqkivi kkreplnfgi
      121 pegntgfssr laatqdipfi hqspelgdld twqentnawe eeedaawqae evlrqqkiae
      181 rekraaeqqr kkmekeaqrl mkkeqnkigv kls
//
LOCUS       XP_041326726             655 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat domain-containing protein 55 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326726
VERSION     XP_041326726.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470792.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..655
                     /product="ankyrin repeat domain-containing protein 55"
                     /calculated_mol_wt=72232
     Region          13..296
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Site            order(54,56,60..61,64..66,68..69,73,76,85,87,89,93..94,
                     97..99,101..102,106,109,118,120,122,161..162,165..167,
                     169..170,174,177,186)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          54..85
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          87..118
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          120..186
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          191..222
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(194..195,198..200,202..203,207,210,222,224,226,
                     230..231,234..236,238..239,243,246,256,258,260,264..265,
                     268..270,272..273,277,280,289)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          224..256
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          258..289
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..655
                     /gene="ANKRD55"
                     /coded_by="XM_041470792.1:284..2251"
                     /db_xref="GeneID:121355397"
ORIGIN      
        1 mdfssssvfd qhkadaaeem dlavvyqaaa ngdvntltav iredpsiles cdregctplm
       61 havsgrqvdt vklllkmgan intqdacgrt slslatylgw legcvsllrn gakqnipdkn
      121 grlplhaata epdvrllsll lqqsnlsein hqdnegmtsl hwaafhnrpq htqtllhkga
      181 dptlvdkdfk talhwavqsg nrilcsiild hwqgpsiiny ddedgktcmh iaaaagysdi
      241 iselakvpkc nlqaldvddr tplhwaaaag kadcvqtlle lgidssprdi nentpltyai
      301 ycghtacikl ltqessrses vhqfhsqnnr ltkkegrfsm lnqifsckkk kddqktsqke
      361 rsrdqypgee tsevddiitr fdcimnknck dipdeckttp dfkrkstdtk yltaekkksv
      421 cqglppittq sfppitggns fltasqskms rfsssssthh fphksqkcrs ehnlldntds
      481 cqallddpwn tdsnqrlsyk vctrtssdkl mnglnsdrsh hvllcppclp slpsspsgrs
      541 frqmsidqhk mknvipvqss lapipnhsah kiqlpsqdak kfkslrtgav ilppapvsrs
      601 lktghsqsqi lysllpglsg ehlkpscilp aipnqkksnp eedlekpltk sdaen
//
LOCUS       XP_041326727             258 aa            linear   VRT 06-MAY-2021
DEFINITION  granzyme A [Pyrgilauda ruficollis].
ACCESSION   XP_041326727
VERSION     XP_041326727.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470793.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..258
                     /product="granzyme A"
                     /calculated_mol_wt=27771
     Region          26..254
                     /region_name="Tryp_SPc"
                     /note="Trypsin-like serine protease; Many of these are
                     synthesized as inactive precursor zymogens that are
                     cleaved during limited proteolysis to generate their
                     active forms. Alignment contains also inactive enzymes
                     that have substitutions of the catalytic triad...;
                     cd00190"
                     /db_xref="CDD:238113"
     Site            26
                     /site_type="active"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     Site            order(66,110,209)
                     /site_type="active"
                     /db_xref="CDD:238113"
     Site            order(203,224,226)
                     /site_type="other"
                     /note="substrate binding sites [chemical binding]"
                     /db_xref="CDD:238113"
     CDS             1..258
                     /gene="GZMA"
                     /coded_by="XM_041470793.1:35..811"
                     /db_xref="GeneID:121355398"
ORIGIN      
        1 mgaflpwytf tavillvihg glcvdiiggn evqphsrpfm aqikgpggii cggalikenw
       61 vltaahckve kskvilgahs skkrekeqqa fqiakgipyp cydpstkend imllqlqgra
      121 klnkavqpip lppsdddprp gtvctvagwg vttnrpgkfp talmevnitv irreicndkn
      181 hyngkpvite nmicagakng kkdscngdsg gplrcnnimk gitsfgkqkk cgdaggpgvy
      241 trltkrhlew irktigga
//
LOCUS       XP_041326728             498 aa            linear   VRT 06-MAY-2021
DEFINITION  angiopoietin-1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326728
VERSION     XP_041326728.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470794.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..498
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..498
                     /product="angiopoietin-1"
                     /calculated_mol_wt=57198
     Region          <73..261
                     /region_name="CALCOCO1"
                     /note="Calcium binding and coiled-coil domain (CALCOCO1)
                     like; pfam07888"
                     /db_xref="CDD:462303"
     Region          281..496
                     /region_name="FReD"
                     /note="Fibrinogen-related domains (FReDs); C terminal
                     globular domain of fibrinogen. Fibrinogen is involved in
                     blood clotting, being activated by thrombin to assemble
                     into fibrin clots. The N-termini of 2 times 3 chains come
                     together to form a globular...; cd00087"
                     /db_xref="CDD:238040"
     Site            402
                     /site_type="other"
                     /note="gamma-gamma dimer interface [polypeptide binding]"
                     /db_xref="CDD:238040"
     Site            order(431,433,435)
                     /site_type="other"
                     /note="Ca2+ binding site [ion binding]"
                     /db_xref="CDD:238040"
     Site            order(439,442..443,452..453)
                     /site_type="active"
                     /note="polymerization pocket [active]"
                     /db_xref="CDD:238040"
     CDS             1..498
                     /gene="ANGPT1"
                     /coded_by="XM_041470794.1:1..1497"
                     /db_xref="GeneID:121355399"
ORIGIN      
        1 msvffsfafl avilalvgct sqrrgpegsg rrfnrvqhgq ctytfilpeq dgncresttd
       61 qyntnalqrd aphveqdfss qklqhlehvm enytqwlqkl enyivenmks emvqlqqnav
      121 qnhtatmlei gtsllsqtae qtrkltdvet qvlnqtsrle iqllenslst yklekqllqq
      181 theilkihek nsllehrile meerhkeela tlkeekenlq slvtrqsyii qelekqlnka
      241 tsnnsvlqkq qlelmdtvht litlcskegv llknakkeee kpfrdcadvy qsgvnksgvy
      301 tiyinnvsdp kkvfcnmeia gggwtviqhr edgsldfqks wkeykmgfgs psgehwlgne
      361 fifaitsqrq yslrielmdw egnraysqyd rfhignekqn yrlylkghsg tagkqsslil
      421 hgaefstkda dndncmckca lmltggwwfd acgpsnlngm fytagqnhgk lngikwhyfk
      481 gpsyslrstt mmirpldf
//
LOCUS       XP_041326730             181 aa            linear   VRT 06-MAY-2021
DEFINITION  protein MAL2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326730
VERSION     XP_041326730.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470796.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..181
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..181
                     /product="protein MAL2"
                     /calculated_mol_wt=19995
     Region          33..171
                     /region_name="MARVEL"
                     /note="Membrane-associating domain; pfam01284"
                     /db_xref="CDD:366555"
     CDS             1..181
                     /gene="MAL2"
                     /coded_by="XM_041470796.1:30..575"
                     /db_xref="GeneID:121355400"
ORIGIN      
        1 mlprgassmp pppnpapyfp pprvtlpsgl eilrtfsgav ifleivfgti vwilvastqi
       61 plpllqgwvm fvavtawfls ivflsvflfg yanriavnwn qadfifhgat fvfyfgafll
      121 qaattslhyf prkfnsttqe tilsgreyni siaasifafa taicygcsta lalrrwrlnn
      181 s
//
LOCUS       XP_041326731             206 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 15 isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326731
VERSION     XP_041326731.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470797.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..206
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..206
                     /product="ADP-ribosylation factor-like protein 15 isoform
                     X1"
                     /calculated_mol_wt=22895
     Region          36..195
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            41..48
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133362"
     Site            order(43..49,87,144..145,147,178..180)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133362"
     Site            65
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133362"
     Site            69..71
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133362"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133362"
     Site            order(86..87,103..104)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133362"
     Site            144..147
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133362"
     Site            178..180
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133362"
     CDS             1..206
                     /gene="ARL15"
                     /coded_by="XM_041470797.1:200..820"
                     /db_xref="GeneID:121355401"
ORIGIN      
        1 mseciqlsfa vcrigiytcf ralcckgppp prpeydlvci glsgsgktsl lsqlcsesse
       61 nivsttgfsi kavpfqnail nvkelggadn irkywsryyq gsqgvifvld sasseddlet
      121 arnelhsalq hpqlctlpfl ilanhqdkpa arsvqeikky feleplargk rwilkpcsld
      181 dmeavkdsfs llinlleerd fepsrm
//
LOCUS       XP_041326732             192 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 15 isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326732
VERSION     XP_041326732.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470798.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..192
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..192
                     /product="ADP-ribosylation factor-like protein 15 isoform
                     X2"
                     /calculated_mol_wt=21402
     Region          22..181
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            27..34
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133362"
     Site            order(29..35,73,130..131,133,164..166)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:133362"
     Site            51
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133362"
     Site            55..57
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133362"
     Site            70..73
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133362"
     Site            order(72..73,89..90)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133362"
     Site            130..133
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133362"
     Site            164..166
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:133362"
     CDS             1..192
                     /gene="ARL15"
                     /coded_by="XM_041470798.1:88..666"
                     /db_xref="GeneID:121355401"
ORIGIN      
        1 mdylcfralc ckgpppprpe ydlvciglsg sgktsllsql csessenivs ttgfsikavp
       61 fqnailnvke lggadnirky wsryyqgsqg vifvldsass eddletarne lhsalqhpql
      121 ctlpflilan hqdkpaarsv qeikkyfele plargkrwil kpcslddmea vkdsfsllin
      181 lleerdfeps rm
//
LOCUS       XP_041326733             167 aa            linear   VRT 06-MAY-2021
DEFINITION  ADP-ribosylation factor-like protein 15 isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326733
VERSION     XP_041326733.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470799.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..167
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..167
                     /product="ADP-ribosylation factor-like protein 15 isoform
                     X3"
                     /calculated_mol_wt=18199
     Region          36..>156
                     /region_name="P-loop containing Nucleoside Triphosphate
                     Hydrolases"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; cl38936"
                     /db_xref="CDD:476819"
     Site            41..48
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:133362"
     Site            65
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:133362"
     Site            69..71
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:133362"
     Site            84..87
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:133362"
     Site            order(86..87,103..104)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:133362"
     Site            144..147
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:133362"
     CDS             1..167
                     /gene="ARL15"
                     /coded_by="XM_041470799.1:200..703"
                     /db_xref="GeneID:121355401"
ORIGIN      
        1 mseciqlsfa vcrigiytcf ralcckgppp prpeydlvci glsgsgktsl lsqlcsesse
       61 nivsttgfsi kavpfqnail nvkelggadn irkywsryyq gsqgvifvld sasseddlet
      121 arnelhsalq hpqlctlpfl ilanhqdkpa arsvqeeips giermml
//
LOCUS       XP_041326735             529 aa            linear   VRT 06-MAY-2021
DEFINITION  DEP domain-containing protein 1B isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326735
VERSION     XP_041326735.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470801.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..529
                     /product="DEP domain-containing protein 1B isoform X1"
                     /calculated_mol_wt=61234
     Region          15..106
                     /region_name="DEP_BRCC3"
                     /note="DEP (Dishevelled, Egl-10, and Pleckstrin) domain
                     found in BBRC3-like proteins. BBRC3, also known as
                     DEPDC1B, is a DEP containing protein of unknown function;
                     cd04447"
                     /db_xref="CDD:239894"
     Region          177..400
                     /region_name="RhoGAP_BRCC3-like"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of BRCC3-like proteins. This
                     subgroup also contains two groups of closely related
                     proteins, BRCC3 and DEPDC7, which both contain a
                     C-terminal RhoGAP-like domain and an N-terminal...;
                     cd04405"
                     /db_xref="CDD:239870"
     Site            order(231,276,280,351,354..355,379)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239870"
     Site            231
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239870"
     CDS             1..529
                     /gene="DEPDC1B"
                     /coded_by="XM_041470801.1:19..1608"
                     /db_xref="GeneID:121355402"
ORIGIN      
        1 meprlvgpgp yratrlwnei ielfragmpl rkhrcrfksy ercfkaseav eclhellgsn
       61 qnfgpevtrd qtvkllkkfl knhviedikg rwgkedfedd ghlyrfppss plksypkkps
      121 cgkevikfpd wsepragpsq ehipvksvtm nsemwykrhs iaigevpack lvfrreltqt
      181 nieeiwksmt lsrlqkvlgl dsldevldtk lvnskhivqn vynvnkqgiv tledkskelp
      241 hwilsamkcl vnwpscsdlk qptysgferd vfktimdyfd qmkeplltfh ffdifvsvlg
      301 llqkpnkave alqisclllp penrkrlqll vrmmarisln qdmprlsesv rtrtlmvqvf
      361 srcilcskde idldellaak lvsflmdnyq eilsvpsalk tsiedhvahl qrvqikyaga
      421 dsdatlppps fchqittgef eyqratgsqe plaalleeiv mnkeisvkdk kkklkqfqks
      481 ypevyrvrfp speteamlfp ektkqkppil mwalkkpfqp fhrtrsfrm
//
LOCUS       XP_041326736             467 aa            linear   VRT 06-MAY-2021
DEFINITION  DEP domain-containing protein 1B isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326736
VERSION     XP_041326736.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470802.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..467
                     /product="DEP domain-containing protein 1B isoform X2"
                     /calculated_mol_wt=54358
     Region          15..106
                     /region_name="DEP"
                     /note="DEP domain, named after Dishevelled, Egl-10, and
                     Pleckstrin, where this domain was first discovered. The
                     function of this domain is still not clear, but it is
                     believed to be important for the membrane association of
                     the signaling proteins in which it is...; cl02442"
                     /db_xref="CDD:470580"
     Region          177..400
                     /region_name="RhoGAP_BRCC3-like"
                     /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like
                     small GTPases) domain of BRCC3-like proteins. This
                     subgroup also contains two groups of closely related
                     proteins, BRCC3 and DEPDC7, which both contain a
                     C-terminal RhoGAP-like domain and an N-terminal...;
                     cd04405"
                     /db_xref="CDD:239870"
     Site            order(231,276,280,351,354..355,379)
                     /site_type="other"
                     /note="putative GTPase interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:239870"
     Site            231
                     /site_type="active"
                     /note="catalytic residue [active]"
                     /db_xref="CDD:239870"
     CDS             1..467
                     /gene="DEPDC1B"
                     /coded_by="XM_041470802.1:1..1404"
                     /db_xref="GeneID:121355402"
ORIGIN      
        1 meprlvgpgp yratrlwnei ielfragmpl rkhrcrfksy ercfkaseav eclhellgsn
       61 qnfgpevtrd qtvkllkkfl knhviedikg rwgkedfedd ghlyrfppss plksypkkps
      121 cgkevikfpd wsepragpsq ehipvksvtm nsemwykrhs iaigevpack lvfrreltqt
      181 nieeiwksmt lsrlqkvlgl dsldevldtk lvnskhivqn vynvnkqgiv tledkskelp
      241 hwilsamkcl vnwpscsdlk qptysgferd vfktimdyfd qmkeplltfh ffdifvsvlg
      301 llqkpnkave alqisclllp penrkrlqll vrmmarisln qdmprlsesv rtrtlmvqvf
      361 srcilcskde idldellaak lvsflmdnyq eilsvpsalk tsiedhvahl qrvqfqksyp
      421 evyrvrfpsp eteamlfpek tkqkppilmw alkkpfqpfh rtrsfrm
//
LOCUS       XP_041326737             313 aa            linear   VRT 06-MAY-2021
DEFINITION  ER membrane protein complex subunit 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326737
VERSION     XP_041326737.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470803.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="ER membrane protein complex subunit 2"
                     /calculated_mol_wt=36334
     Region          71..>251
                     /region_name="Spy"
                     /note="Predicted O-linked N-acetylglucosamine transferase,
                     SPINDLY family [Posttranslational modification, protein
                     turnover, chaperones]; COG3914"
                     /db_xref="CDD:443119"
     Site            order(111..112,114,138,141..142,145..146,148..149,172,
                     175..176,179..180,183)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          136..166
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          171..198
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          204..237
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..313
                     /gene="EMC2"
                     /coded_by="XM_041470803.1:48..989"
                     /db_xref="GeneID:121355403"
ORIGIN      
        1 mtagavtplr hgaaakmakv semydvtwed mrdkmrkwre enyrnseqiv dvgeeliney
       61 asklgddiwi iyeqvmiaal dcsrddlalf clqelrrqfp gshrvkrltg mrfeameryd
      121 daiqlydril qedstntaar krkiairkaq gknleairel neyleqfvgd qeawhelael
      181 yinehdyaka afcleelmmt nphnhlycqq yaevkytqgg lenlelsrky faqalklnnr
      241 nmralfglym sashiasnpk asakmkkdnm kyaswaanqi nrayqfagrs kketkyslka
      301 vedmletlqi tqs
//
LOCUS       XP_041326738             559 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-coupled neutral amino acid transporter 9 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326738
VERSION     XP_041326738.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470804.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="sodium-coupled neutral amino acid transporter 9
                     isoform X1"
                     /calculated_mol_wt=62898
     Region          112..525
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..559
                     /gene="SLC38A9"
                     /coded_by="XM_041470804.1:209..1888"
                     /db_xref="GeneID:121355404"
ORIGIN      
        1 meedikpilv pvggdesnyg imniqfnped ykckrpfhve ptnivsvndd mqrvtdeasa
       61 mnkrihyysr ltspadrali apdhvlpapd eiyvysplgt afkvdsctdg ygknsslvti
      121 fmiwntmmgt silsipwgik qagftsgivl illmgiltly ccyrvvksrq mipltdtsnw
      181 efpdvckyyf gsfgqwssll fsmvslvgam vvywvlmsnf lfntgkfiyn fvhdinvtdi
      241 vpgtngsnkv icpsaagdhp pqnrsvmfss gnrtgfelfe ewwdksktvp fyliavllpl
      301 lnlkspsffa kfnvlgtvsv vylvflvtvk aahlgihlef nwfteneffv pefrilfpql
      361 tgiltlaffi hncvitllqn nrnqennvrd lsiayflvgl tylyvgviif asfpspplsk
      421 ecieqnfldn fpsddimsfv arifllfqmm tvypllgyla rvqllkqffg naypslfhvl
      481 ilnlaivgag vamarfypni ggiirysgat cglafvfvyp sliymislhr agqltwpali
      541 ihifiillgl anliaqfll
//
LOCUS       XP_041326739             559 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-coupled neutral amino acid transporter 9 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326739
VERSION     XP_041326739.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470805.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="sodium-coupled neutral amino acid transporter 9
                     isoform X1"
                     /calculated_mol_wt=62898
     Region          112..525
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..559
                     /gene="SLC38A9"
                     /coded_by="XM_041470805.1:171..1850"
                     /db_xref="GeneID:121355404"
ORIGIN      
        1 meedikpilv pvggdesnyg imniqfnped ykckrpfhve ptnivsvndd mqrvtdeasa
       61 mnkrihyysr ltspadrali apdhvlpapd eiyvysplgt afkvdsctdg ygknsslvti
      121 fmiwntmmgt silsipwgik qagftsgivl illmgiltly ccyrvvksrq mipltdtsnw
      181 efpdvckyyf gsfgqwssll fsmvslvgam vvywvlmsnf lfntgkfiyn fvhdinvtdi
      241 vpgtngsnkv icpsaagdhp pqnrsvmfss gnrtgfelfe ewwdksktvp fyliavllpl
      301 lnlkspsffa kfnvlgtvsv vylvflvtvk aahlgihlef nwfteneffv pefrilfpql
      361 tgiltlaffi hncvitllqn nrnqennvrd lsiayflvgl tylyvgviif asfpspplsk
      421 ecieqnfldn fpsddimsfv arifllfqmm tvypllgyla rvqllkqffg naypslfhvl
      481 ilnlaivgag vamarfypni ggiirysgat cglafvfvyp sliymislhr agqltwpali
      541 ihifiillgl anliaqfll
//
LOCUS       XP_041326740             559 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-coupled neutral amino acid transporter 9 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326740
VERSION     XP_041326740.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470806.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..559
                     /product="sodium-coupled neutral amino acid transporter 9
                     isoform X1"
                     /calculated_mol_wt=62898
     Region          112..525
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..559
                     /gene="SLC38A9"
                     /coded_by="XM_041470806.1:67..1746"
                     /db_xref="GeneID:121355404"
ORIGIN      
        1 meedikpilv pvggdesnyg imniqfnped ykckrpfhve ptnivsvndd mqrvtdeasa
       61 mnkrihyysr ltspadrali apdhvlpapd eiyvysplgt afkvdsctdg ygknsslvti
      121 fmiwntmmgt silsipwgik qagftsgivl illmgiltly ccyrvvksrq mipltdtsnw
      181 efpdvckyyf gsfgqwssll fsmvslvgam vvywvlmsnf lfntgkfiyn fvhdinvtdi
      241 vpgtngsnkv icpsaagdhp pqnrsvmfss gnrtgfelfe ewwdksktvp fyliavllpl
      301 lnlkspsffa kfnvlgtvsv vylvflvtvk aahlgihlef nwfteneffv pefrilfpql
      361 tgiltlaffi hncvitllqn nrnqennvrd lsiayflvgl tylyvgviif asfpspplsk
      421 ecieqnfldn fpsddimsfv arifllfqmm tvypllgyla rvqllkqffg naypslfhvl
      481 ilnlaivgag vamarfypni ggiirysgat cglafvfvyp sliymislhr agqltwpali
      541 ihifiillgl anliaqfll
//
LOCUS       XP_041326741             438 aa            linear   VRT 06-MAY-2021
DEFINITION  sodium-coupled neutral amino acid transporter 9 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326741
VERSION     XP_041326741.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470807.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..438
                     /product="sodium-coupled neutral amino acid transporter 9
                     isoform X2"
                     /calculated_mol_wt=49360
     Region          4..404
                     /region_name="SLC5-6-like_sbd"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; cl00456"
                     /db_xref="CDD:444915"
     CDS             1..438
                     /gene="SLC38A9"
                     /coded_by="XM_041470807.1:122..1438"
                     /db_xref="GeneID:121355404"
ORIGIN      
        1 miwntmmgts ilsipwgikq agftsgivli llmgiltlyc cyrvvksrqm ipltdtsnwe
       61 fpdvckyyfg sfgqwssllf smvslvgamv vywvlmsnfl fntgkfiynf vhdinvtdiv
      121 pgtngsnkvi cpsaagdhpp qnrsvmfssg nrtgfelfee wwdksktvpf yliavllpll
      181 nlkspsffak fnvlgtvsvv ylvflvtvka ahlgihlefn wfteneffvp efrilfpqlt
      241 giltlaffih ncvitllqnn rnqennvrdl siayflvglt ylyvgviifa sfpspplske
      301 cieqnfldnf psddimsfva rifllfqmmt vypllgylar vqllkqffgn aypslfhvli
      361 lnlaivgagv amarfypnig giirysgatc glafvfvyps liymislhra gqltwpalii
      421 hifiillgla nliaqfll
//
LOCUS       XP_041326742             453 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041326742
VERSION     XP_041326742.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470808.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="Krueppel-like factor 10"
                     /calculated_mol_wt=48937
     Region          19..342
                     /region_name="KLF10_N"
                     /note="N-terminal domain of Kruppel-like factor 10;
                     cd21572"
                     /db_xref="CDD:409241"
     Region          <98..>244
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          326..>397
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          344..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(351,353,355,357..358,361..362,365,381,383,387..388,
                     391..392,395,409,411,413,415..416,419..420,423)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          374..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          402..424
                     /region_name="zf-C2H2_4"
                     /note="C2H2-type zinc finger; pfam13894"
                     /db_xref="CDD:464025"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..453
                     /gene="KLF10"
                     /coded_by="XM_041470808.1:146..1507"
                     /db_xref="GeneID:121355405"
ORIGIN      
        1 memmtekqrd mryfwnntpe ksdyeaveal ismscnwksd lkrhaemrpi tpasdmsees
       61 deallpgaad fnaipafclt ppyspsdlem sqvihplgka lpeaakppla tprreaersp
      121 aarplkarvt svirhtadaq lcdhktcpvr tasvlkfqds awgetnrkqn akeehsvcsa
      181 psaasaetse lsvaegrtae paagpvpltk psvskeesvp epaeqpavaa plspaqgsga
      241 ppvpvicqmv plptnnnvvt avvpnaapsq qpalcqpmvf mgtqvpkgav mfvvpqpvvq
      301 gtkapivspn gtrlspiapa pgfvpstakt tpqadssrir shicgypgcg ktyfksshlk
      361 ahvrthtgek pfscswkgce rrfarsdels rhrrthtgek kfacpmcerr fmrsdhltkh
      421 arrhlsakkl pnwqmevskl sdgavppasa taq
//
LOCUS       XP_041326743             453 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041326743
VERSION     XP_041326743.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470809.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="Krueppel-like factor 10"
                     /calculated_mol_wt=48937
     Region          19..342
                     /region_name="KLF10_N"
                     /note="N-terminal domain of Kruppel-like factor 10;
                     cd21572"
                     /db_xref="CDD:409241"
     Region          <98..>244
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          326..>397
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          344..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(351,353,355,357..358,361..362,365,381,383,387..388,
                     391..392,395,409,411,413,415..416,419..420,423)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          374..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          402..424
                     /region_name="zf-C2H2_4"
                     /note="C2H2-type zinc finger; pfam13894"
                     /db_xref="CDD:464025"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..453
                     /gene="KLF10"
                     /coded_by="XM_041470809.1:161..1522"
                     /db_xref="GeneID:121355405"
ORIGIN      
        1 memmtekqrd mryfwnntpe ksdyeaveal ismscnwksd lkrhaemrpi tpasdmsees
       61 deallpgaad fnaipafclt ppyspsdlem sqvihplgka lpeaakppla tprreaersp
      121 aarplkarvt svirhtadaq lcdhktcpvr tasvlkfqds awgetnrkqn akeehsvcsa
      181 psaasaetse lsvaegrtae paagpvpltk psvskeesvp epaeqpavaa plspaqgsga
      241 ppvpvicqmv plptnnnvvt avvpnaapsq qpalcqpmvf mgtqvpkgav mfvvpqpvvq
      301 gtkapivspn gtrlspiapa pgfvpstakt tpqadssrir shicgypgcg ktyfksshlk
      361 ahvrthtgek pfscswkgce rrfarsdels rhrrthtgek kfacpmcerr fmrsdhltkh
      421 arrhlsakkl pnwqmevskl sdgavppasa taq
//
LOCUS       XP_041326745             453 aa            linear   VRT 06-MAY-2021
DEFINITION  Krueppel-like factor 10 [Pyrgilauda ruficollis].
ACCESSION   XP_041326745
VERSION     XP_041326745.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470811.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..453
                     /product="Krueppel-like factor 10"
                     /calculated_mol_wt=48937
     Region          19..342
                     /region_name="KLF10_N"
                     /note="N-terminal domain of Kruppel-like factor 10;
                     cd21572"
                     /db_xref="CDD:409241"
     Region          <98..>244
                     /region_name="PRK07003"
                     /note="DNA polymerase III subunit gamma/tau"
                     /db_xref="CDD:235906"
     Region          326..>397
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          344..366
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(351,353,355,357..358,361..362,365,381,383,387..388,
                     391..392,395,409,411,413,415..416,419..420,423)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          374..396
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          402..424
                     /region_name="zf-C2H2_4"
                     /note="C2H2-type zinc finger; pfam13894"
                     /db_xref="CDD:464025"
     Region          404..424
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..453
                     /gene="KLF10"
                     /coded_by="XM_041470811.1:80..1441"
                     /db_xref="GeneID:121355405"
ORIGIN      
        1 memmtekqrd mryfwnntpe ksdyeaveal ismscnwksd lkrhaemrpi tpasdmsees
       61 deallpgaad fnaipafclt ppyspsdlem sqvihplgka lpeaakppla tprreaersp
      121 aarplkarvt svirhtadaq lcdhktcpvr tasvlkfqds awgetnrkqn akeehsvcsa
      181 psaasaetse lsvaegrtae paagpvpltk psvskeesvp epaeqpavaa plspaqgsga
      241 ppvpvicqmv plptnnnvvt avvpnaapsq qpalcqpmvf mgtqvpkgav mfvvpqpvvq
      301 gtkapivspn gtrlspiapa pgfvpstakt tpqadssrir shicgypgcg ktyfksshlk
      361 ahvrthtgek pfscswkgce rrfarsdels rhrrthtgek kfacpmcerr fmrsdhltkh
      421 arrhlsakkl pnwqmevskl sdgavppasa taq
//
LOCUS       XP_041326746             383 aa            linear   VRT 06-MAY-2021
DEFINITION  growth/differentiation factor 6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326746
VERSION     XP_041326746.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470812.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..383
                     /product="growth/differentiation factor 6"
                     /calculated_mol_wt=41849
     Region          54..229
                     /region_name="TGFb_propeptide"
                     /note="TGF-beta propeptide; cl46657"
                     /db_xref="CDD:480997"
     Region          282..383
                     /region_name="TGF_beta_GDF5_6_7"
                     /note="transforming growth factor beta (TGF-beta) like
                     domain found in growth/differentiation factor 5 (GDF5),
                     factor 6 (GDF6), factor 7 (GDF7) and similar proteins;
                     cd13766"
                     /db_xref="CDD:381644"
     Site            order(287..289,293..296,299,306,308..310,312,317..322,
                     326..328,330..332,334..335,337..338,340,343..344,347,
                     349..350,353,358,362,370,372..375,377,383)
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:381644"
     CDS             1..383
                     /gene="GDF6"
                     /coded_by="XM_041470812.1:84..1235"
                     /db_xref="GeneID:121355406"
ORIGIN      
        1 mnarrallsa allasllwdl pcclpaslpa sselaasskg grsrrvprsp renrprqggh
       61 amdralprae pheymlslfr tysiaeklgi nasffqssks antitsfvdr grddlspapl
      121 rrqqyvfdvs tlseteelvg aelrlfrrap qgrpppaapl hvqlsaclsp rpldsraldp
      181 raassagwev fdvrqglreq rpwkrlclel rasadrgprr wldlrglgfa rrprpxxxxx
      241 xxxelgappp paarrpparr qrrtafasrh gkrhgkksrl rcskkplhvn fkelgwddwi
      301 iapleyeahh cegvcdfplr shleptnhai iqtlmnsmdp gstppsccvp tkltpisily
      361 idagnnvvyk qyedmvvesc gcr
//
LOCUS       XP_041326747             193 aa            linear   VRT 06-MAY-2021
DEFINITION  neurocalcin-delta [Pyrgilauda ruficollis].
ACCESSION   XP_041326747
VERSION     XP_041326747.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470813.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..193
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..193
                     /product="neurocalcin-delta"
                     /calculated_mol_wt=22130
     Region          21..175
                     /region_name="FRQ1"
                     /note="Ca2+-binding protein, EF-hand superfamily [Signal
                     transduction mechanisms]; COG5126"
                     /db_xref="CDD:444056"
     CDS             1..193
                     /gene="NCALD"
                     /coded_by="XM_041470813.1:122..703"
                     /db_xref="GeneID:121355407"
ORIGIN      
        1 mgkqnsklrp evmqdllest dfteheiqew ykgflrdcps ghlsmeefkk iygnffpygd
       61 askfaehvfr tfdangdgti dfrefiials vtsrgkleqk lkwafsmydl dgngyiskse
      121 mleivqaiyk mvssvmkmpe destpekrte kifrqmdtnr dgklsleefi rgaksdpsiv
      181 rllqcdpssa gqf
//
LOCUS       XP_041326748             506 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium voltage-gated channel subfamily V member 1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326748
VERSION     XP_041326748.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470814.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..506
                     /product="potassium voltage-gated channel subfamily V
                     member 1"
                     /calculated_mol_wt=56286
     Region          53..167
                     /region_name="BTB_POZ"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain superfamily; cl38908"
                     /db_xref="CDD:453885"
     Region          215..441
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..506
                     /gene="KCNV1"
                     /coded_by="XM_041470814.1:1..1521"
                     /db_xref="GeneID:121355408"
ORIGIN      
        1 mksppccmsl ssqasledpg sstslgsles svfsseeeqg pllqkvipsl dcftinvggs
       61 rfvmsqqtls cypdtrlgkl avvvsaardv asgllelcdd anlveneyff drssqafhyi
      121 lnyyqtgrlh vmeqlcalsf lqeiqywgld elsidsccrd ryfrrkelse aldikkdaee
      181 ldaqdeeedf sgslcpnvrq klwevlekpg ssaaartfgt lsmvfvvvsi anmalisvel
      241 swlapallda leylciawft aefvlrllca rdrcrflrsv aniidllail pfyitllves
      301 lcggessqel envgrivqvl rllralrmlk lgrhstglrs lgmtiaqcye evgllllfls
      361 vgisifstve yfveqgvpgt tftsvpgaww wattsmttvg ygdirpdtti gkvvafmcil
      421 sgilvlalpi aiindrfsac yftlkikeaa lrqrealkkl mknsssdsni nvnlrdiyar
      481 svmdmlrlks rerastrssg adefwf
//
LOCUS       XP_041326749             111 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome b-c1 complex subunit 7 [Pyrgilauda ruficollis].
ACCESSION   XP_041326749
VERSION     XP_041326749.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470815.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..111
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..111
                     /product="cytochrome b-c1 complex subunit 7"
                     /calculated_mol_wt=13312
     Region          12..106
                     /region_name="UCR_14kD"
                     /note="Ubiquinol-cytochrome C reductase complex 14kD
                     subunit; pfam02271"
                     /db_xref="CDD:460519"
     CDS             1..111
                     /gene="LOC121355409"
                     /coded_by="XM_041470815.1:92..427"
                     /db_xref="GeneID:121355409"
ORIGIN      
        1 maarapvagg grlldrickw yynaagfnky glmrddtlhe dedvkealkr lpehlynerv
       61 frikraldls lkhqilpkdq wvkyeedhry lepylkevir erqereawnk k
//
LOCUS       XP_041326750             240 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-3C isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326750
VERSION     XP_041326750.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470816.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..240
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..240
                     /product="ras-related protein Rab-3C isoform X1"
                     /calculated_mol_wt=27169
     Region          43..207
                     /region_name="Rab3"
                     /note="Rab GTPase family 3 contains Rab3A, Rab3B, Rab3C
                     and Rab3D; cd01865"
                     /db_xref="CDD:206657"
     Site            order(43,76,78..80,95,97,104..105,108,112,114..117,
                     146..148,204,207)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206657"
     Site            43..45
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206657"
     Site            50..57
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206657"
     Site            order(52..58,68..69,72,74..75,101,156..157,159..160,
                     186..188)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206657"
     Site            order(58..69,72..74)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206657"
     Site            order(68,73..81)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206657"
     Site            order(73,77..84,91,93)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206657"
     Site            75
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206657"
     Site            order(76..77,79,97..98,105,107,109..111)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206657"
     Site            76..80
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206657"
     Site            93..97
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206657"
     Site            98..101
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206657"
     Site            order(101,103..113)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206657"
     Site            104..109
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206657"
     Site            112..116
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206657"
     Site            121..126
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206657"
     Site            144..153
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206657"
     Site            156..159
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206657"
     Site            186..188
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206657"
     Site            202..207
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206657"
     CDS             1..240
                     /gene="RAB3C"
                     /coded_by="XM_041470816.1:1..723"
                     /db_xref="GeneID:121355410"
ORIGIN      
        1 mrheapmqvg pragadetla qmasvqdsry gqkdtsdqnf dymfklliig nssvgktsfl
       61 fryaddsfts afvstvgidf kvktvfknek riklqiwdta gqeryrtitt ayyrgamgfi
      121 lmyditneds fnavqdwstq iktyswdnaq vilvgnkcdm edervifaer gkhlaeqlgf
      181 effetsaken invkqtferl vdiicdkmse sletnptiaa snqntqlkdt pppqqpscsc
//
LOCUS       XP_041326751             227 aa            linear   VRT 06-MAY-2021
DEFINITION  ras-related protein Rab-3C isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326751
VERSION     XP_041326751.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470817.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..227
                     /product="ras-related protein Rab-3C isoform X2"
                     /calculated_mol_wt=25902
     Region          30..194
                     /region_name="Rab3"
                     /note="Rab GTPase family 3 contains Rab3A, Rab3B, Rab3C
                     and Rab3D; cd01865"
                     /db_xref="CDD:206657"
     Site            order(30,63,65..67,82,84,91..92,95,99,101..104,133..135,
                     191,194)
                     /site_type="active"
                     /note="effector interaction site [active]"
                     /db_xref="CDD:206657"
     Site            30..32
                     /site_type="other"
                     /note="Rab subfamily motif 1 (RabSF1)"
                     /db_xref="CDD:206657"
     Site            37..44
                     /site_type="other"
                     /note="G1 box"
                     /db_xref="CDD:206657"
     Site            order(39..45,55..56,59,61..62,88,143..144,146..147,
                     173..175)
                     /site_type="other"
                     /note="GTP/Mg2+ binding site [chemical binding]"
                     /db_xref="CDD:206657"
     Site            order(45..56,59..61)
                     /site_type="other"
                     /note="Rab subfamily motif 2 (RabSF2)"
                     /db_xref="CDD:206657"
     Site            order(55,60..68)
                     /site_type="other"
                     /note="Switch I region"
                     /db_xref="CDD:206657"
     Site            order(60,64..71,78,80)
                     /site_type="other"
                     /note="putative GEF interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206657"
     Site            62
                     /site_type="other"
                     /note="G2 box"
                     /db_xref="CDD:206657"
     Site            order(63..64,66,84..85,92,94,96..98)
                     /site_type="other"
                     /note="putative GDI interaction site [polypeptide
                     binding]"
                     /db_xref="CDD:206657"
     Site            63..67
                     /site_type="other"
                     /note="Rab family motif 1 (RabF1)"
                     /db_xref="CDD:206657"
     Site            80..84
                     /site_type="other"
                     /note="Rab family motif 2 (RabF2)"
                     /db_xref="CDD:206657"
     Site            85..88
                     /site_type="other"
                     /note="G3 box"
                     /db_xref="CDD:206657"
     Site            order(88,90..100)
                     /site_type="other"
                     /note="Switch II region"
                     /db_xref="CDD:206657"
     Site            91..96
                     /site_type="other"
                     /note="Rab family motif 3 (RabF3)"
                     /db_xref="CDD:206657"
     Site            99..103
                     /site_type="other"
                     /note="Rab family motif 4 (RabF4)"
                     /db_xref="CDD:206657"
     Site            108..113
                     /site_type="other"
                     /note="Rab family motif 5 (RabF5)"
                     /db_xref="CDD:206657"
     Site            131..140
                     /site_type="other"
                     /note="Rab subfamily motif 3 (RabSF3)"
                     /db_xref="CDD:206657"
     Site            143..146
                     /site_type="other"
                     /note="G4 box"
                     /db_xref="CDD:206657"
     Site            173..175
                     /site_type="other"
                     /note="G5 box"
                     /db_xref="CDD:206657"
     Site            189..194
                     /site_type="other"
                     /note="Rab subfamily motif 4 (RabSF4)"
                     /db_xref="CDD:206657"
     CDS             1..227
                     /gene="RAB3C"
                     /coded_by="XM_041470817.1:1..684"
                     /db_xref="GeneID:121355410"
ORIGIN      
        1 mrheapmqma svqdsrygqk dtsdqnfdym fklliignss vgktsflfry addsftsafv
       61 stvgidfkvk tvfknekrik lqiwdtagqe ryrtittayy rgamgfilmy ditnedsfna
      121 vqdwstqikt yswdnaqvil vgnkcdmede rvifaergkh laeqlgfeff etsakeninv
      181 kqtferlvdi icdkmsesle tnptiaasnq ntqlkdtppp qqpscsc
//
LOCUS       XP_041326753             522 aa            linear   VRT 06-MAY-2021
DEFINITION  beta-1-syntrophin [Pyrgilauda ruficollis].
ACCESSION   XP_041326753
VERSION     XP_041326753.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470819.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..522
                     /product="beta-1-syntrophin"
                     /calculated_mol_wt=56779
     Region          95..177
                     /region_name="PDZ_syntrophin-like"
                     /note="PDZ domain of syntrophins, and related domains;
                     cd06801"
                     /db_xref="CDD:467262"
     Site            order(106..112,124,127,157,161,164..165)
                     /site_type="other"
                     /note="peptide binding site [polypeptide binding]"
                     /db_xref="CDD:467262"
     Region          <217..283
                     /region_name="PHsplit_syntrophin"
                     /note="Syntrophin Split Pleckstrin homology (PH) domain;
                     cd01258"
                     /db_xref="CDD:269960"
     Region          307..417
                     /region_name="PH"
                     /note="PH domain; pfam00169"
                     /db_xref="CDD:459697"
     CDS             1..522
                     /gene="SNTB1"
                     /coded_by="XM_041470819.1:84..1652"
                     /db_xref="GeneID:121355411"
ORIGIN      
        1 mavaaagggg vgraqrsgwl evlvrerwhk vlanlggeal vlsgeerpdg aahnglggdg
       61 tacrgaeggg gpaavrtaft dppeqvpeai snkkrcvkvl kqemgglgis ikggkenkmp
      121 iliskifkgl aadqtqalyv gdailavngt dlrdathdea vqalkragke vllevkymre
      181 atpyvkkgsp vseigwetpp pesprlgcap adpmsqlsls ihrdrktipl kmcyvtrnlt
      241 vsdpenriie vhspdakhtv vlrskdsata qawfnaihss vneliprvia evrdqlgktg
      301 iagsreirhl gwlaekvpgd nekhwkpvlv vltekdlliy esmprikeaw fspvhtypll
      361 atrlvhsgpg kgspksgvdl sfatrtgtrq giethlfrte tsrdlslwtr svvqgchnsa
      421 eliteittsc tyksqecrlt ihyehgfslt tepqdgafsk tiaqypyekl kmssddgirm
      481 lyldfgekdg eiqldlhscp kpivfiihsf lsakitrlgl va
//
LOCUS       XP_041326754             339 aa            linear   VRT 06-MAY-2021
DEFINITION  secretory carrier-associated membrane protein 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326754
VERSION     XP_041326754.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470820.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..339
                     /product="secretory carrier-associated membrane protein 1
                     isoform X1"
                     /calculated_mol_wt=38064
     Region          75..>114
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          118..293
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..339
                     /gene="SCAMP1"
                     /coded_by="XM_041470820.1:168..1187"
                     /db_xref="GeneID:121355412"
ORIGIN      
        1 msdfdsnpfa dpdlnnpfkd psvtqvtrnv ppgldeynpf sdsrtpppgn mkmpnvpstq
       61 paimkpteep ssytqiakeh alaqaellkr qeelerkaae ldrreremqs lnqqggrknn
      121 wpplpenfpv gpcfyqdfsv dipvefqktv kimyylwmfh tvtlflnifg clawfyvdat
      181 rgvdfglsil wfllftpcsf vcwyrplyga frsdssfrff vfffvyicqf avhvlqaagf
      241 qrwgncgwis sltglnksip vgimmiiiaa lftasavisl vmfkkvhgly rttgasfeka
      301 qqefatgvms nktvqtaaan aastaatsaa qnafkgnrm
//
LOCUS       XP_041326755             313 aa            linear   VRT 06-MAY-2021
DEFINITION  secretory carrier-associated membrane protein 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326755
VERSION     XP_041326755.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470821.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..313
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..313
                     /product="secretory carrier-associated membrane protein 1
                     isoform X2"
                     /calculated_mol_wt=35190
     Region          49..>88
                     /region_name="COG4372"
                     /note="Uncharacterized protein, contains DUF3084 domain
                     [Function unknown]"
                     /db_xref="CDD:443500"
     Region          92..267
                     /region_name="SCAMP"
                     /note="SCAMP family; pfam04144"
                     /db_xref="CDD:461193"
     CDS             1..313
                     /gene="SCAMP1"
                     /coded_by="XM_041470821.1:168..1109"
                     /db_xref="GeneID:121355412"
ORIGIN      
        1 msdfdsnpfa dpdlnnpfkp ppgnmkmpnv pstqpaimkp teepssytqi akehalaqae
       61 llkrqeeler kaaeldrrer emqslnqqgg rknnwpplpe nfpvgpcfyq dfsvdipvef
      121 qktvkimyyl wmfhtvtlfl nifgclawfy vdatrgvdfg lsilwfllft pcsfvcwyrp
      181 lygafrsdss frffvfffvy icqfavhvlq aagfqrwgnc gwissltgln ksipvgimmi
      241 iiaalftasa vislvmfkkv hglyrttgas fekaqqefat gvmsnktvqt aaanaastaa
      301 tsaaqnafkg nrm
//
LOCUS       XP_041326756             506 aa            linear   VRT 06-MAY-2021
DEFINITION  potassium voltage-gated channel subfamily S member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326756
VERSION     XP_041326756.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470822.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..506
                     /product="potassium voltage-gated channel subfamily S
                     member 2"
                     /calculated_mol_wt=57075
     Region          47..153
                     /region_name="BTB_POZ_KCNS2"
                     /note="BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ
                     (poxvirus and zinc finger) domain found in potassium
                     voltage-gated channel subfamily S member 2 (KCNS2);
                     cd18427"
                     /db_xref="CDD:349734"
     Site            order(51,53..60,63,99,101..102,105,108,112,115,118,120,
                     128..129,132)
                     /site_type="other"
                     /note="putative tetramer interface [polypeptide binding]"
                     /db_xref="CDD:349734"
     Region          215..450
                     /region_name="Ion_trans"
                     /note="Ion transport protein; pfam00520"
                     /db_xref="CDD:459842"
     CDS             1..506
                     /gene="KCNS2"
                     /coded_by="XM_041470822.1:1..1521"
                     /db_xref="GeneID:121355413"
ORIGIN      
        1 mggrgsgtrt pgpfpaafsf pthlwkeltm tgqslsalse anfedneisi nvggfkkkmr
       61 sntllrfpet rlgkllschs kesilelcdd yddtknefyf drnpelfpyv lhfyntgklh
      121 vmgelcvfsf sqeieywgin effidsccsy syhgrkmepd qekweeqsdq esttssfdei
      181 lafyndaskf dkqpfgnirr qlwlaldnpg ysvlsrifsv lsivvvlgsi vtmclnslpd
      241 fqivdsngnt eedprfeive hfgiawftfe lvarfavapd flkffkhaln lidlmsilpf
      301 yitlivnlvv essptlanlg rvaqvlrlmr ifrilklarh stglrslgat lkysyrevgl
      361 lllylsvgis ifsvvaytie kedneglati pacwwwatvs mttvgygdvv pgstagklta
      421 sacilagilv vvlpitlifn kfshfyrrqk qlesamrscd fgdgmkevps vnlrdyyayk
      481 vkslmasltn msrstpsels lndslh
//
LOCUS       XP_041326757             249 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family F member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326757
VERSION     XP_041326757.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470823.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="pleckstrin homology domain-containing family F
                     member 2"
                     /calculated_mol_wt=27643
     Region          7..129
                     /region_name="PH_Phafin2-like"
                     /note="Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or
                     PLEKHF2) Pleckstrin Homology (PH) domain; cd01218"
                     /db_xref="CDD:269927"
     Region          148..211
                     /region_name="FYVE_PKHF2"
                     /note="FYVE domain found in protein containing both PH and
                     FYVE domains 2 (phafin-2) and similar proteins; cd15755"
                     /db_xref="CDD:277294"
     Site            order(149,152,171..176,178..179,202..204)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277294"
     CDS             1..249
                     /gene="PLEKHF2"
                     /coded_by="XM_041470823.1:109..858"
                     /db_xref="GeneID:121355414"
ORIGIN      
        1 mvdrlansea ntrrisiven cfgaagqplt ipgrvligeg vltklcrkkp karqfflfnd
       61 ilvygniviq kkkynkqhii plenvtidsi qdegdlrngw liktptksfa vyaatateks
      121 ewmnhinkcv sdllsksgkt psnehaavwv pdseatvcmr cqkakftpvn rrhhcrkcgf
      181 vvcgpcsekr fllpsqsskp vricdfcydl lstgemaacq strsdsysqs pksslndvsd
      241 ddddedssd
//
LOCUS       XP_041326758             249 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family F member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326758
VERSION     XP_041326758.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470824.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="pleckstrin homology domain-containing family F
                     member 2"
                     /calculated_mol_wt=27643
     Region          7..129
                     /region_name="PH_Phafin2-like"
                     /note="Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or
                     PLEKHF2) Pleckstrin Homology (PH) domain; cd01218"
                     /db_xref="CDD:269927"
     Region          148..211
                     /region_name="FYVE_PKHF2"
                     /note="FYVE domain found in protein containing both PH and
                     FYVE domains 2 (phafin-2) and similar proteins; cd15755"
                     /db_xref="CDD:277294"
     Site            order(149,152,171..176,178..179,202..204)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277294"
     CDS             1..249
                     /gene="PLEKHF2"
                     /coded_by="XM_041470824.1:218..967"
                     /db_xref="GeneID:121355414"
ORIGIN      
        1 mvdrlansea ntrrisiven cfgaagqplt ipgrvligeg vltklcrkkp karqfflfnd
       61 ilvygniviq kkkynkqhii plenvtidsi qdegdlrngw liktptksfa vyaatateks
      121 ewmnhinkcv sdllsksgkt psnehaavwv pdseatvcmr cqkakftpvn rrhhcrkcgf
      181 vvcgpcsekr fllpsqsskp vricdfcydl lstgemaacq strsdsysqs pksslndvsd
      241 ddddedssd
//
LOCUS       XP_041326759             249 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family F member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326759
VERSION     XP_041326759.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470825.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="pleckstrin homology domain-containing family F
                     member 2"
                     /calculated_mol_wt=27643
     Region          7..129
                     /region_name="PH_Phafin2-like"
                     /note="Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or
                     PLEKHF2) Pleckstrin Homology (PH) domain; cd01218"
                     /db_xref="CDD:269927"
     Region          148..211
                     /region_name="FYVE_PKHF2"
                     /note="FYVE domain found in protein containing both PH and
                     FYVE domains 2 (phafin-2) and similar proteins; cd15755"
                     /db_xref="CDD:277294"
     Site            order(149,152,171..176,178..179,202..204)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277294"
     CDS             1..249
                     /gene="PLEKHF2"
                     /coded_by="XM_041470825.1:228..977"
                     /db_xref="GeneID:121355414"
ORIGIN      
        1 mvdrlansea ntrrisiven cfgaagqplt ipgrvligeg vltklcrkkp karqfflfnd
       61 ilvygniviq kkkynkqhii plenvtidsi qdegdlrngw liktptksfa vyaatateks
      121 ewmnhinkcv sdllsksgkt psnehaavwv pdseatvcmr cqkakftpvn rrhhcrkcgf
      181 vvcgpcsekr fllpsqsskp vricdfcydl lstgemaacq strsdsysqs pksslndvsd
      241 ddddedssd
//
LOCUS       XP_041326760             249 aa            linear   VRT 06-MAY-2021
DEFINITION  pleckstrin homology domain-containing family F member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326760
VERSION     XP_041326760.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470826.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..249
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..249
                     /product="pleckstrin homology domain-containing family F
                     member 2"
                     /calculated_mol_wt=27643
     Region          7..129
                     /region_name="PH_Phafin2-like"
                     /note="Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or
                     PLEKHF2) Pleckstrin Homology (PH) domain; cd01218"
                     /db_xref="CDD:269927"
     Region          148..211
                     /region_name="FYVE_PKHF2"
                     /note="FYVE domain found in protein containing both PH and
                     FYVE domains 2 (phafin-2) and similar proteins; cd15755"
                     /db_xref="CDD:277294"
     Site            order(149,152,171..176,178..179,202..204)
                     /site_type="other"
                     /note="putative phosphatidylinositol 3-phosphate binding
                     site [chemical binding]"
                     /db_xref="CDD:277294"
     CDS             1..249
                     /gene="PLEKHF2"
                     /coded_by="XM_041470826.1:130..879"
                     /db_xref="GeneID:121355414"
ORIGIN      
        1 mvdrlansea ntrrisiven cfgaagqplt ipgrvligeg vltklcrkkp karqfflfnd
       61 ilvygniviq kkkynkqhii plenvtidsi qdegdlrngw liktptksfa vyaatateks
      121 ewmnhinkcv sdllsksgkt psnehaavwv pdseatvcmr cqkakftpvn rrhhcrkcgf
      181 vvcgpcsekr fllpsqsskp vricdfcydl lstgemaacq strsdsysqs pksslndvsd
      241 ddddedssd
//
LOCUS       XP_041326761            1496 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase 1 isoform X1
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326761
VERSION     XP_041326761.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470827.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1496
                     /product="mitogen-activated protein kinase kinase kinase 1
                     isoform X1"
                     /calculated_mol_wt=163454
     Region          440..495
                     /region_name="RING-CH-C4HC3_ZSWM2"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     zinc finger SWIM domain-containing protein 2 (ZSWIM2) and
                     similar proteins; cd16494"
                     /db_xref="CDD:438157"
     Region          1235..1493
                     /region_name="STKc_MEKK1"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Mitogen-Activated Protein (MAP)/Extracellular
                     signal-Regulated Kinase (ERK) Kinase Kinase 1; cd06630"
                     /db_xref="CDD:270800"
     Site            order(1242..1246,1250,1263,1265,1300,1316..1319,
                     1322..1323,1326,1362,1364..1365,1371..1372,1375,
                     1393..1396,1398,1425,1434)
                     /site_type="active"
                     /db_xref="CDD:270800"
     Site            order(1242..1246,1250,1263,1265,1300,1316..1319,
                     1321..1323,1326,1371..1373)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270800"
     Site            order(1245..1246,1362,1364..1365,1375,1393..1396,1398,
                     1425,1434)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270800"
     Site            1371..1398
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270800"
     CDS             1..1496
                     /gene="MAP3K1"
                     /coded_by="XM_041470827.1:40..4530"
                     /db_xref="GeneID:121355416"
ORIGIN      
        1 maaaagdras ssglssggga eaaaaaacgs lkggavagsv agsgggllre agggsreqrs
       61 dwrrkqlrkv rsveldrlpe aplflaaapa assssssssp eppetlllhy lpgpprsspa
      121 spaaspsrfa ellealpags pagtdpaaer rmepspaasr dmenketlrg lqkmddrpee
      181 rmireklkat cmpawkhewl errsrrgpvv vkpipgkvdg semtklcldp qaeghntass
      241 psqkgrrsps psssssssar tvksespgvr rkrvspvpfq sgritpprra pspdgfspys
      301 peetnrrvnk vmrarlyllq qigpnsflig gdspdnkyrv figpqtcscg rgtfcihllf
      361 vmlrvfqlep sdpmlwrktl knfeveslfq kyhsrrssri kapsrntiqk fvsrmsnsht
      421 lsssststss sensmkdeee qmcpicllgm ldeesltvce dgcrnklhhh cmsiwaeecr
      481 rnreplicpl crskwrshdf yshelpspvd ssvlrvvqqq sqqqsavgsq rrtqdnnfnl
      541 thygvqqips tykdsaepwi qvfgmelvgc lfsrnwnire malrrlshdv sgalllange
      601 stgnsgssng nntsagalga asgssqtsis gdvvvesccs vlsmvcadpv ykvyvaalkt
      661 lramlvytpc htlaersklq rllkpvveti lvkcadansr tsqlsvstll emckgqagel
      721 avgreilksg sigiggvdyv lncilgneie ssnwqallgr lclidrllle fpsefyphiv
      781 cgdvlqadti vdrykkllsl ltfalqsidn shsmvgklsr riflsaarmv arvphifvkl
      841 ldmlsvtsst hyarmrrrlm aiademeiae aiqlgmeemh sgecrhedfl hlpvpdnspe
      901 ttenntpnnt vqlsgksgkg lsdrklsasp ddfpemlagl amglpvssvt teqpkpaiqt
      961 kgkphsqcvn sspssshsqs lfptllspsn psvpagtvtd vsklrpqgfv pckipspspq
     1021 tqrklslqfq rncsenkese klspvftqar plpsshvhrp kpsrptpsdv nkqgetlksg
     1081 mtldlndisq cdgnsnavip seetvftpvd ekcrldvnae lnssiedlle asmptsdgtv
     1141 tfksevavls peraenddty kddvnhnqkc kekmeaeeee alaiamamsa sqdalpvipq
     1201 lqvengedii iiqqdtpetl pghtkakhhy redaewlkgq qiglgafssc yqaqdvgtgt
     1261 lmavkqvtyv rntsseqeev vealreeirm mshlnhpnii rmlgatceks nynlfiewma
     1321 ggsvahllsk ygafkesvii nyteqllrgl sylhenqiih rdvkghrlri adfgaaarla
     1381 skgtgagefq gqllgtiafm apevlrgqqy grscdvwsvg cvviemacak ppwnaekhsn
     1441 hlalifkias attapsipth lspglkdvtl rclelqpqdr ppsrellkhp vfrttw
//
LOCUS       XP_041326762            1505 aa            linear   VRT 06-MAY-2021
DEFINITION  mitogen-activated protein kinase kinase kinase 1 isoform X2
            [Pyrgilauda ruficollis].
ACCESSION   XP_041326762
VERSION     XP_041326762.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470828.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..1505
                     /product="mitogen-activated protein kinase kinase kinase 1
                     isoform X2"
                     /calculated_mol_wt=164339
     Region          440..495
                     /region_name="RING-CH-C4HC3_ZSWM2"
                     /note="RING-CH finger, H2 subclass (C4HC3-type), found in
                     zinc finger SWIM domain-containing protein 2 (ZSWIM2) and
                     similar proteins; cd16494"
                     /db_xref="CDD:438157"
     Region          1235..1502
                     /region_name="STKc_MEKK1"
                     /note="Catalytic domain of the Protein Serine/Threonine
                     Kinase, Mitogen-Activated Protein (MAP)/Extracellular
                     signal-Regulated Kinase (ERK) Kinase Kinase 1; cd06630"
                     /db_xref="CDD:270800"
     Site            order(1242..1246,1250,1263,1265,1300,1316..1319,
                     1322..1323,1326,1362,1364..1367,1369,1380..1381,1384,
                     1402..1405,1407,1434,1443)
                     /site_type="active"
                     /db_xref="CDD:270800"
     Site            order(1242..1246,1250,1263,1265,1300,1316..1319,
                     1321..1323,1326,1366..1367,1369,1380..1382)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270800"
     Site            order(1245..1246,1362,1364..1366,1384,1402..1405,1407,
                     1434,1443)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270800"
     Site            1380..1407
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270800"
     CDS             1..1505
                     /gene="MAP3K1"
                     /coded_by="XM_041470828.1:62..4579"
                     /db_xref="GeneID:121355416"
ORIGIN      
        1 maaaagdras ssglssggga eaaaaaacgs lkggavagsv agsgggllre agggsreqrs
       61 dwrrkqlrkv rsveldrlpe aplflaaapa assssssssp eppetlllhy lpgpprsspa
      121 spaaspsrfa ellealpags pagtdpaaer rmepspaasr dmenketlrg lqkmddrpee
      181 rmireklkat cmpawkhewl errsrrgpvv vkpipgkvdg semtklcldp qaeghntass
      241 psqkgrrsps psssssssar tvksespgvr rkrvspvpfq sgritpprra pspdgfspys
      301 peetnrrvnk vmrarlyllq qigpnsflig gdspdnkyrv figpqtcscg rgtfcihllf
      361 vmlrvfqlep sdpmlwrktl knfeveslfq kyhsrrssri kapsrntiqk fvsrmsnsht
      421 lsssststss sensmkdeee qmcpicllgm ldeesltvce dgcrnklhhh cmsiwaeecr
      481 rnreplicpl crskwrshdf yshelpspvd ssvlrvvqqq sqqqsavgsq rrtqdnnfnl
      541 thygvqqips tykdsaepwi qvfgmelvgc lfsrnwnire malrrlshdv sgalllange
      601 stgnsgssng nntsagalga asgssqtsis gdvvvesccs vlsmvcadpv ykvyvaalkt
      661 lramlvytpc htlaersklq rllkpvveti lvkcadansr tsqlsvstll emckgqagel
      721 avgreilksg sigiggvdyv lncilgneie ssnwqallgr lclidrllle fpsefyphiv
      781 cgdvlqadti vdrykkllsl ltfalqsidn shsmvgklsr riflsaarmv arvphifvkl
      841 ldmlsvtsst hyarmrrrlm aiademeiae aiqlgmeemh sgecrhedfl hlpvpdnspe
      901 ttenntpnnt vqlsgksgkg lsdrklsasp ddfpemlagl amglpvssvt teqpkpaiqt
      961 kgkphsqcvn sspssshsqs lfptllspsn psvpagtvtd vsklrpqgfv pckipspspq
     1021 tqrklslqfq rncsenkese klspvftqar plpsshvhrp kpsrptpsdv nkqgetlksg
     1081 mtldlndisq cdgnsnavip seetvftpvd ekcrldvnae lnssiedlle asmptsdgtv
     1141 tfksevavls peraenddty kddvnhnqkc kekmeaeeee alaiamamsa sqdalpvipq
     1201 lqvengedii iiqqdtpetl pghtkakhhy redaewlkgq qiglgafssc yqaqdvgtgt
     1261 lmavkqvtyv rntsseqeev vealreeirm mshlnhpnii rmlgatceks nynlfiewma
     1321 ggsvahllsk ygafkesvii nyteqllrgl sylhenqiih rdvkganlli dstghrlria
     1381 dfgaaarlas kgtgagefqg qllgtiafma pevlrgqqyg rscdvwsvgc vviemacakp
     1441 pwnaekhsnh lalifkiasa ttapsipthl spglkdvtlr clelqpqdrp psrellkhpv
     1501 frttw
//
LOCUS       XP_041326763             412 aa            linear   VRT 06-MAY-2021
DEFINITION  transcription termination factor 3, mitochondrial [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326763
VERSION     XP_041326763.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470829.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..412
                     /product="transcription termination factor 3,
                     mitochondrial"
                     /calculated_mol_wt=46066
     Region          154..>368
                     /region_name="mTERF"
                     /note="pfam02536"
                     /db_xref="CDD:460581"
     CDS             1..412
                     /gene="MTERF3"
                     /coded_by="XM_041470829.1:140..1378"
                     /db_xref="GeneID:121355417"
ORIGIN      
        1 malwarhaar wacllstara aelprglrgg gcparecarr avlpagkeaa lcrlqacrpv
       61 slgscsppdg aedgscsspe snlpavqqer akaeilpdln akildkdwdd ippssalevi
      121 seeeavqiia epllpiqsst lrdyvdhset laklvhlgvd lsqvekrqka gqllltldfe
      181 kdvkkillfl kdvgvednql gpfltknpyi lgedlealet rvaylkskkf gkseiaqmvs
      241 rapylllfsv erldnrlgff knelglsvkk tkdlvirlpr lltgkiepvk enlqvcqiel
      301 gfqrdeiqqi vcktpkilta skkrlkqtfd ylhnimgiph hmltrfpqvf nskllrirer
      361 hmflaflgra qydpaepsyi sldqlvslpd evfcteiaka smqdfenflk tl
//
LOCUS       XP_041326765             412 aa            linear   VRT 06-MAY-2021
DEFINITION  5-hydroxytryptamine receptor 1A [Pyrgilauda ruficollis].
ACCESSION   XP_041326765
VERSION     XP_041326765.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470831.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..412
                     /product="5-hydroxytryptamine receptor 1A"
                     /calculated_mol_wt=45399
     Region          31..401
                     /region_name="7tmA_5-HT1A_vertebrates"
                     /note="serotonin receptor subtype 1A from vertebrates,
                     member of the class A family of seven-transmembrane G
                     protein-coupled receptors; cd15330"
                     /db_xref="CDD:320453"
     Region          32..58
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320453"
     Region          65..91
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320453"
     Region          103..133
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320453"
     Site            order(106..107,110..111,114..115,181,193,197,348,351..352,
                     358,369,372..373,376,380)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320453"
     Region          145..167
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320453"
     Region          186..215
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320453"
     Region          328..358
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320453"
     Region          369..394
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320453"
     CDS             1..412
                     /gene="HTR1A"
                     /coded_by="XM_041470831.1:61..1299"
                     /db_xref="GeneID:121355418"
ORIGIN      
        1 mdvtnnttsp arspegtsgp glaemtlgyq vltslllgtl ilcavsgnac viaaialers
       61 lqtvanylig slavtdlmvs vlvlpmaaly qvlnkwtlgq vtcdifisld vlcctssilh
      121 lcaialdryw aitdpidyvn krtprraavl isltwligfl isippmlgwr tpedrsnpda
      181 ctiskdhgyt iystfgafyi plllmlvlyg rifkaarfri rktvkkaekk kiadtcltls
      241 patvkkgnge pgkgwrrtve pkpgacvnga vrqgqdgtal eiievqhcns sskthlplps
      301 eacgspppps ferrneknte akrrmalsre rktvktlgii mgtfilcwlp ffivalvlpf
      361 cdskcympew lgavinwlgy snsllnpiiy ayfnkdfqsa fkkiikckfc rq
//
LOCUS       XP_041326766             388 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc transporter 8 [Pyrgilauda ruficollis].
ACCESSION   XP_041326766
VERSION     XP_041326766.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470832.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..388
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..388
                     /product="zinc transporter 8"
                     /calculated_mol_wt=42856
     Region          54..374
                     /region_name="CzcD"
                     /note="Co/Zn/Cd efflux system component [Inorganic ion
                     transport and metabolism]; COG1230"
                     /db_xref="CDD:440843"
     CDS             1..388
                     /gene="SLC30A8"
                     /coded_by="XM_041470832.1:1..1167"
                     /db_xref="GeneID:121355419"
ORIGIN      
        1 matekglert clvsekdtkk yslaldrmsw lqknsneerq qqeaevtgan payhchsysq
       61 ayenrqreqh qarrklcvas victffmiae itgkyvcgqv agslavvsda ahllvdltsf
      121 lislfslclt skpptkqftf gwhraeilga lmsmiivwmv tgvltylacm rllhpdydid
      181 atvmlitsac avltnillsl ilhqsghghs hgaparehts aplekpalsn aslqaafvht
      241 igdlfqsisv lisaliiffk pqykiadpic tfvfsvfvla ttvtilrdil tmlmegtskg
      301 faydavkari ltvekvnsvh dlhlwsltmn qtalsahiat adstdsqkil rdvtqalseh
      361 ysfhsitiqi esgedqkpgc vfcqeprd
//
LOCUS       XP_041326767             241 aa            linear   VRT 06-MAY-2021
DEFINITION  R-spondin-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326767
VERSION     XP_041326767.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470833.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..241
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..241
                     /product="R-spondin-2"
                     /calculated_mol_wt=27686
     Region          40..141
                     /region_name="Furin-like_2"
                     /note="Furin-like repeat, cysteine-rich; pfam15913"
                     /db_xref="CDD:464939"
     Region          145..198
                     /region_name="TSP1_spondin"
                     /note="Spondin-like TSP1 domain; cl46269"
                     /db_xref="CDD:480609"
     CDS             1..241
                     /gene="RSPO2"
                     /coded_by="XM_041470833.1:228..953"
                     /db_xref="GeneID:121355420"
ORIGIN      
        1 mqfrlfsfal iilncmdygh cqpgrwrrsk ranygpnpic kgclscskdn gcircqhklf
       61 fflrregmrq ygeclhscps gyyglrtpdm nrcsrcrien cdscfsrdfc tkcksgfysh
      121 rgrcfrgcpa gfaaleelme cvegcevgqw sewgtcsrnn ktcgfkwgle trtrqivkkp
      181 akdtipcpti aesrrckmam rhcpggrrpa ktkdkkkkkk nlmeraqkqh siflatdkts
      241 q
//
LOCUS       XP_041326768             709 aa            linear   VRT 06-MAY-2021
DEFINITION  frizzled-6 [Pyrgilauda ruficollis].
ACCESSION   XP_041326768
VERSION     XP_041326768.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470834.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..709
                     /product="frizzled-6"
                     /calculated_mol_wt=79715
     Region          21..151
                     /region_name="CRD_FZ"
                     /note="CRD_domain cysteine-rich domain, also known as Fz
                     (frizzled) domain; cl02447"
                     /db_xref="CDD:470581"
     Site            order(32,34..35,38..40)
                     /site_type="other"
                     /note="putative Wnt binding site [polypeptide binding]"
                     /db_xref="CDD:143549"
     Region          189..509
                     /region_name="7tmF_FZD6"
                     /note="class F frizzled subfamily 6, member of
                     7-transmembrane G protein-coupled receptors; cd15032"
                     /db_xref="CDD:320160"
     Site            order(190,199,249,270,352,357,359,362..363,368,443,
                     446..447,472,477,480..481)
                     /site_type="other"
                     /note="putative ligand binding site [chemical binding]"
                     /db_xref="CDD:320160"
     Region          198..223
                     /region_name="TM helix 1"
                     /note="TM helix 1 [structural motif]"
                     /db_xref="CDD:320160"
     Region          232..253
                     /region_name="TM helix 2"
                     /note="TM helix 2 [structural motif]"
                     /db_xref="CDD:320160"
     Region          284..310
                     /region_name="TM helix 3"
                     /note="TM helix 3 [structural motif]"
                     /db_xref="CDD:320160"
     Region          327..343
                     /region_name="TM helix 4"
                     /note="TM helix 4 [structural motif]"
                     /db_xref="CDD:320160"
     Region          365..394
                     /region_name="TM helix 5"
                     /note="TM helix 5 [structural motif]"
                     /db_xref="CDD:320160"
     Region          414..441
                     /region_name="TM helix 6"
                     /note="TM helix 6 [structural motif]"
                     /db_xref="CDD:320160"
     Region          470..495
                     /region_name="TM helix 7"
                     /note="TM helix 7 [structural motif]"
                     /db_xref="CDD:320160"
     CDS             1..709
                     /gene="FZD6"
                     /coded_by="XM_041470834.1:255..2384"
                     /db_xref="GeneID:121355422"
ORIGIN      
        1 mgalvlsvtc slllalvqgh slftcepiti srcsgmpynm tffpnlmghy dqdtaarkmd
       61 pflilmnlhc spdvhtflcr afvpacldqi hvihpcrslc ekvysdckql mdtfgiawpe
      121 electrlinc deaapataav ttnihgtqkt psqirrdygf wcprhlhttn gqgykflgid
      181 qcappcpnmy fknyeldvak sfigivsifc lcatlftflt flidvkrfry perpiiyysv
      241 cysivslmyf igfllgnrta cneadeklei getvvlgsqn kactvlfmvl yfftmagtiw
      301 wviltitwfl aagrkwscea iaqkamwfha vawgipgflt imllamnkve gdnisgvcfv
      361 glydldasly fvllplclcv ffglslllag iislnhvrqv iqhdgrnqek lkkfmirigv
      421 fsglylvplv allgcyvyel vnrkiwettw vfdhcdqyhi pcpyqakala rpeiflflmk
      481 ylltlivgis pvfwvgskkt csewanffnr nrkrdpises rrvlqescef flrhnskvkh
      541 kkkhykstsh rlkvisksmg tstggttnhg tsavaitnhd ylsqetvaei ksspetseke
      601 meadgasarr veegensgdq tlrsakltvd qgerrnkads tchmsalaes ikrvgegrit
      661 pkndfsesps lqrscsqipd vpqspsvsll vysasdarre ldsgnssnp
//
LOCUS       XP_041326769             490 aa            linear   VRT 06-MAY-2021
DEFINITION  serine/threonine-protein kinase 3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326769
VERSION     XP_041326769.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470835.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..490
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..490
                     /product="serine/threonine-protein kinase 3"
                     /calculated_mol_wt=55964
     Region          22..277
                     /region_name="STKc_MST1_2"
                     /note="Catalytic domain of the Serine/Threonine Kinases,
                     Mammalian STe20-like protein kinase 1 and 2; cd06612"
                     /db_xref="CDD:132943"
     Site            order(32..36,40,53,55,82,98..101,104..105,108,145,
                     147..150,152,162..163,166,180..183,185,212,221)
                     /site_type="active"
                     /db_xref="CDD:132943"
     Site            order(32..36,40,53,55,82,98..101,104..105,108,149..150,
                     152,163)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:132943"
     Site            order(35..36,145,147..149,166,180..183,185,212,221)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:132943"
     Site            order(162..174,176..185)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:132943"
     Region          435..483
                     /region_name="SARAH_MST2"
                     /note="C-terminal SARAH domain of mammalian STE20-like
                     protein kinase 2 (MST2); cd21888"
                     /db_xref="CDD:439182"
     Site            order(436,439..442,444,447..448,451,454..455,458,461..462,
                     465..466,468..469,472..473,475..480,483)
                     /site_type="other"
                     /note="dimer interface [polypeptide binding]"
                     /db_xref="CDD:439182"
     CDS             1..490
                     /gene="STK3"
                     /coded_by="XM_041470835.1:223..1695"
                     /db_xref="GeneID:121355423"
ORIGIN      
        1 meqaapkskl kklsedsltk qpeevfdvle klgegsygsv fkaihkesgq vvaikqvpve
       61 sdlqeiikei simqqcdspy vvkyygsyfk ntdlwivmey cgagsvsdii rlrnktlted
      121 eiatilkstl kgleylhfmr kihrdikagn illnteghak ladfgvagql tdtmakrntv
      181 igtpfwmape viqeigyncv adiwslgits iemaegkppy adihpmraif miptnppptf
      241 rkpelwsdef tdfvkkclvk npeqratatq llqhtfikna kpvsilrdli teameikakr
      301 heeqqrelee eeensdedel dshtmvktns esagtmrats tmsegaqtmi ehnstmlesd
      361 lgtmvinsdd deeedgtmkr natspqvqrp sfmdyfdkqd sknkspencn qnmhepyhis
      421 knifpdnwkv pqdgdfdflk nlsleelqmr lkaldpmmer eieelrqryt akrqpildam
      481 dakkrrqqnf
//
LOCUS       XP_041326770             474 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylserine synthase 1 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326770
VERSION     XP_041326770.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470836.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..474
                     /product="phosphatidylserine synthase 1 isoform X1"
                     /calculated_mol_wt=55441
     Region          96..372
                     /region_name="PSS"
                     /note="Phosphatidyl serine synthase; pfam03034"
                     /db_xref="CDD:460783"
     CDS             1..474
                     /gene="PTDSS1"
                     /coded_by="XM_041470836.1:126..1550"
                     /db_xref="GeneID:121355424"
ORIGIN      
        1 mascvgsrtl skddvnyrlh frmineqqve ditleffyrp htitllsfti lslmafaftr
       61 ddsvpedniw rgilsvifff liisvlafpn gpftrphpal wrmvfglsvl yflflvfvlf
      121 lnfeqvkavm ywldpnlrya treadimeya vnchvitwer ilshfdifaf ghfwgwamka
      181 llirsyglcw tisitwelte lffmhllpnf aecwwdqvil dillcngggi wlgmvvcrfl
      241 emrtyhwasf kdihtttgki kravlqftpa swtyvrwfdp kssfqrvagv ylfmiiwqlt
      301 elntfflkhi fvfqashpls wgrilfigii taptvrqyya yltdtqckrv gtqcwvfgvi
      361 afleaivcik fgqdlfsktq ilyvvfwllc vafttflcly gmvwyaeyyg hrektlsese
      421 dspyspdasw lhskfsragp dnsppkhsvn seshssrrrn rhskskvsng igkk
//
LOCUS       XP_041326772             473 aa            linear   VRT 06-MAY-2021
DEFINITION  phosphatidylserine synthase 1 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326772
VERSION     XP_041326772.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470838.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..473
                     /product="phosphatidylserine synthase 1 isoform X2"
                     /calculated_mol_wt=55370
     Region          96..372
                     /region_name="PSS"
                     /note="Phosphatidyl serine synthase; pfam03034"
                     /db_xref="CDD:460783"
     CDS             1..473
                     /gene="PTDSS1"
                     /coded_by="XM_041470838.1:126..1547"
                     /db_xref="GeneID:121355424"
ORIGIN      
        1 mascvgsrtl skddvnyrlh frmineqqve ditleffyrp htitllsfti lslmafaftr
       61 ddsvpedniw rgilsvifff liisvlafpn gpftrphpal wrmvfglsvl yflflvfvlf
      121 lnfeqvkavm ywldpnlrya treadimeya vnchvitwer ilshfdifaf ghfwgwamka
      181 llirsyglcw tisitwelte lffmhllpnf aecwwdqvil dillcngggi wlgmvvcrfl
      241 emrtyhwasf kdihtttgki kravlqftpa swtyvrwfdp kssfqrvagv ylfmiiwqlt
      301 elntfflkhi fvfqashpls wgrilfigii taptvrqyya yltdtqckrv gtqcwvfgvi
      361 afleaivcik fgqdlfsktq ilyvvfwllc vafttflcly gmvwyaeyyg hrektlsese
      421 dspyspdasw lhskfsrgpd nsppkhsvns eshssrrrnr hskskvsngi gkk
//
LOCUS       XP_041326773              77 aa            linear   VRT 06-MAY-2021
DEFINITION  cytochrome c oxidase subunit 6C-2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326773
VERSION     XP_041326773.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470839.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..77
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..77
                     /product="cytochrome c oxidase subunit 6C-2"
                     /calculated_mol_wt=8409
     Region          6..74
                     /region_name="COX6C"
                     /note="Cytochrome c oxidase subunit VIc; pfam02937"
                     /db_xref="CDD:460756"
     CDS             1..77
                     /gene="LOC121355425"
                     /coded_by="XM_041470839.1:171..404"
                     /db_xref="GeneID:121355425"
ORIGIN      
        1 msaallpkpq mrgllarrmk fhllgafvvs vgcaalykfg vaeprkraya dfyrnydpmk
       61 dfeamkaagv lesapak
//
LOCUS       XP_041326774             402 aa            linear   VRT 06-MAY-2021
DEFINITION  tumor necrosis factor receptor superfamily member 11B [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326774
VERSION     XP_041326774.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470840.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..402
                     /product="tumor necrosis factor receptor superfamily
                     member 11B"
                     /calculated_mol_wt=45962
     Region          6..152
                     /region_name="TNFRSF11B"
                     /note="Tumor necrosis factor receptor superfamily member
                     11B (TNFRSF11B), also known as Osteoprotegerin (OPG);
                     cd10581"
                     /db_xref="CDD:276907"
     Region          6..62
                     /region_name="CRD1"
                     /note="CRD1 [structural motif]"
                     /db_xref="CDD:276907"
     Region          65..105
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276907"
     Region          107..145
                     /region_name="CRD3"
                     /note="CRD3 [structural motif]"
                     /db_xref="CDD:276907"
     Region          124..>186
                     /region_name="TNFRSF"
                     /note="Tumor necrosis factor receptor superfamily
                     (TNFRSF); cd00185"
                     /db_xref="CDD:276900"
     Region          145..185
                     /region_name="CRD2"
                     /note="CRD2 [structural motif]"
                     /db_xref="CDD:276900"
     Region          215..>273
                     /region_name="Death"
                     /note="Death Domain: a protein-protein interaction domain;
                     cd01670"
                     /db_xref="CDD:260017"
     Region          284..360
                     /region_name="Death"
                     /note="Death domain; pfam00531"
                     /db_xref="CDD:459845"
     CDS             1..402
                     /gene="TNFRSF11B"
                     /coded_by="XM_041470840.1:236..1444"
                     /db_xref="GeneID:121355426"
ORIGIN      
        1 mnkflcctlv lldisvkwtf qedsppkylh ydpgtsrqll cdqcppgsyv krhcsasspt
       61 qcapcpaqyy adewnsneec qycstvckel qfvrqecsst qnrvcecvpg rylelefclr
      121 htecppgsgv aqagtpesdt vcercpegff snetsskaac lkhtncsalg fkmalkgnei
      181 rdnicqentd ttpqkcgidv tlceeamfrf avpthvtpnw lniladslpg tkvstenier
      241 ikqrhspqeq tfhllklwkq qnkeqdmvkk iiqdidlcen svlkhvghln ltfehlnmlm
      301 aslpgkkvgk edvertmklc qpteqvlkll nlwrikngdq dtikglmygl khlkmyhfpk
      361 rtiqslkkvi kflhrftmyr lyqklflemv gnqlksvkvr cv
//
LOCUS       XP_041326775             228 aa            linear   VRT 06-MAY-2021
DEFINITION  ankyrin repeat domain-containing protein 46 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326775
VERSION     XP_041326775.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470841.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..228
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..228
                     /product="ankyrin repeat domain-containing protein 46"
                     /calculated_mol_wt=25135
     Region          <15..>128
                     /region_name="ANKYR"
                     /note="Ankyrin repeat [Signal transduction mechanisms];
                     COG0666"
                     /db_xref="CDD:440430"
     Region          15..42
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Site            order(17..18,21..23,25..26,30,33,42,44,46,50..51,54..56,
                     58..59,63,66,75,77,79,83..84,85..86,88..89,93,96,105)
                     /site_type="other"
                     /note="oligomer interface [polypeptide binding]"
                     /db_xref="CDD:293786"
     Region          44..75
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     Region          77..105
                     /region_name="ANK repeat"
                     /note="ANK repeat [structural motif]"
                     /db_xref="CDD:293786"
     CDS             1..228
                     /gene="ANKRD46"
                     /coded_by="XM_041470841.1:289..975"
                     /db_xref="GeneID:121355427"
ORIGIN      
        1 msyvfvndss qtnvpllqac idgdfnyskr llesgfdpni rdsrgrtglh laaargnvdi
       61 cqllhkfgad llatdyqgnt alhlcghvdt iqflvsnglk idicnhqgat plvlakrrgv
      121 nkdvirlles leeqevkgfn rgahskletm qtaesesame shsllnpnlq qgegvlssfr
      181 ttwqefvedl gfwrvlllii viallslgia yyvsgvlpfv enqpelvh
//
LOCUS       XP_041326776             296 aa            linear   VRT 06-MAY-2021
DEFINITION  centromere protein H [Pyrgilauda ruficollis].
ACCESSION   XP_041326776
VERSION     XP_041326776.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470842.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..296
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..296
                     /product="centromere protein H"
                     /calculated_mol_wt=33724
     Region          176..288
                     /region_name="CENP-H"
                     /note="Centromere protein H (CENP-H); pfam05837"
                     /db_xref="CDD:461756"
     CDS             1..296
                     /gene="CENPH"
                     /coded_by="XM_041470842.1:53..943"
                     /db_xref="GeneID:121355428"
ORIGIN      
        1 msqprvggnq kkpclwedft wqhltwnsat eswaappgta lrrrrargpp gaarfesaam
       61 aavtrdsapa papapawsqg sgggygdvdi ptllrlrdrm keqlieynta vlasqenfld
      121 qgieedfiqs atqdlerdie eakvsfqnkt lalqriqimd alrnklkqed edsrliletm
      181 krivllsqti idyqqqvcqk eqqlieikre rlslkkyggq klqqihtmmk kqkeeqarvd
      241 vtekekmlak lekerqmtti iqnvfqniii gsrvnwaedp slkaivlqle knvqlq
//
LOCUS       XP_041326777             171 aa            linear   VRT 06-MAY-2021
DEFINITION  NADH dehydrogenase [ubiquinone] iron-sulfur protein 4,
            mitochondrial [Pyrgilauda ruficollis].
ACCESSION   XP_041326777
VERSION     XP_041326777.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470843.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..171
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..171
                     /product="NADH dehydrogenase [ubiquinone] iron-sulfur
                     protein 4, mitochondrial"
                     /calculated_mol_wt=19138
     Region          72..163
                     /region_name="NDUS4"
                     /note="NADH dehydrogenase ubiquinone Fe-S protein 4;
                     pfam04800"
                     /db_xref="CDD:461433"
     CDS             1..171
                     /gene="NDUFS4"
                     /coded_by="XM_041470843.1:67..582"
                     /db_xref="GeneID:121355429"
ORIGIN      
        1 maaslsmsaa lrgllarrga aavrpppprs lststwrlaq nqtrdtqlit vdekldittl
       61 tgvpdehikt rkvhifvpar namqsgannt kkwkmefdnr erwenplmgw astadplsnm
      121 vltfstkeda iafaekngws ydveekkmpk pksksyganf swnkrtrvst k
//
LOCUS       XP_041326778             363 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: NIPA-like protein 2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326778
VERSION     XP_041326778.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470844.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..363
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..363
                     /product="LOW QUALITY PROTEIN: NIPA-like protein 2"
                     /calculated_mol_wt=39743
     Region          34..316
                     /region_name="EamA"
                     /note="EamA-like transporter family; cl23754"
                     /db_xref="CDD:474045"
     CDS             1..363
                     /gene="NIPAL2"
                     /coded_by="XM_041470844.1:1..1092"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 1 base in 1 codon"
                     /db_xref="GeneID:121355430"
ORIGIN      
        1 mdiipgswna sfggpgagse plsgpwysah ktqlfgvlla aasnflisvs lniqkcahlr
       61 lvcqaepkpc yrsklwwcgi allglaelgn ftayglapia lvaplgcvsv igsafisiff
      121 lkktmrtadi lggaltitgi yllvtftpnv pqeltarqvq nylvswpfla ysileilifc
      181 illyfykrka vkhimvllmm vallasltvi avkavssmia rsvkgkmqlt ysvfyimsvl
      241 maascafqik flnqamhlye atavvpinfv ffttsaiisg vifyrefqsa allsmfmflf
      301 gcllsflgvi iivrnkkeeh lqipfidcgh ipgqkltgki qpdshcscyg tlnkedglvk
      361 rqs
//
LOCUS       XP_041326780             382 aa            linear   VRT 06-MAY-2021
DEFINITION  V-type proton ATPase subunit C 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326780
VERSION     XP_041326780.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470846.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..382
                     /product="V-type proton ATPase subunit C 1"
                     /calculated_mol_wt=44065
     Region          4..370
                     /region_name="V-ATPase_C"
                     /note="V-ATPase subunit C; pfam03223"
                     /db_xref="CDD:460851"
     Region          56..76
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          121..147
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     Region          275..306
                     /region_name="3-helical coiled coil"
                     /note="3-helical coiled coil [structural motif]"
                     /db_xref="CDD:270211"
     CDS             1..382
                     /gene="ATP6V1C1"
                     /coded_by="XM_041470846.1:144..1292"
                     /db_xref="GeneID:121355431"
ORIGIN      
        1 mtefwlisap gektcqqtwe klhaattkhn nlstnskfni pdlkvgtldv lvglsdelak
       61 ldafvesvvk kvaqymadvl edskdkvqen llangvdlvt yitrfqwdma kypikqslkn
      121 iseiiakgvn qidndlkara saynnlkgnl qnlerknags lltrsladiv kkedfvldse
      181 ylvtllvivp klnyndwvkq yetlaemvvp rssnvlfedq dsylcnvtlf rkavddfkhk
      241 areykfmvrd fqyneeemka dkeemnrlst dkkkqfgplv rwlkvnfsea fiawihvkal
      301 rvfvesvlry glpvnfqaml lqpnkktmkk lrevlydlyk hldssaaaii datmdipgln
      361 lsqqeyypyv yykidcnlle fk
//
LOCUS       XP_041326781             355 aa            linear   VRT 06-MAY-2021
DEFINITION  F-box only protein 32 [Pyrgilauda ruficollis].
ACCESSION   XP_041326781
VERSION     XP_041326781.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470847.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..355
                     /product="F-box only protein 32"
                     /calculated_mol_wt=41365
     Region          128..332
                     /region_name="RUN"
                     /note="RUN domain; cl45896"
                     /db_xref="CDD:459241"
     Region          223..270
                     /region_name="F-box_FBXO32"
                     /note="F-box domain found in F-box only protein 32
                     (FBXO32) and similar proteins; cd22103"
                     /db_xref="CDD:438875"
     Site            order(228,232,235..236,239..240,245,247..248,252..254,256)
                     /site_type="other"
                     /note="putative Skp1 binding site [polypeptide binding]"
                     /db_xref="CDD:438875"
     CDS             1..355
                     /gene="FBXO32"
                     /coded_by="XM_041470847.1:219..1286"
                     /db_xref="GeneID:121355432"
ORIGIN      
        1 mpflgqdwrs pgqswvktad gwtrfldeks ggfvgdigsf ckkddhnken lfnsinydva
       61 akkrkkdlln nkaktqyfhq ekwiyvhkgs tkerhgyctl geafnrldfs saildsrrfn
      121 yvvrllelia ksqltslsgi aqknymnile kvvqkvledq qnirlirell qtlytslctl
      181 vqrvgksvlv gninmwvhrm esilhwqqql nniqitrpaf kgttltdlpl clqlnimqrl
      241 sdgrdlvslg qvapdlqvls edrllwkklc qyhftdrqir krlilsdkgq ldwkkmyfkl
      301 ircyprkeqy gdtlqlcrhc hilswkgtdh pctannpetc stslspqefi nlfrf
//
LOCUS       XP_041326782             356 aa            linear   VRT 06-MAY-2021
DEFINITION  protein odd-skipped-related 2 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326782
VERSION     XP_041326782.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470848.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..356
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..356
                     /product="protein odd-skipped-related 2 isoform X1"
                     /calculated_mol_wt=39836
     Region          <216..351
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(223,225,227,229..230,233..234,237,251,253,257..258,
                     261..262,265,279,281,283,285..286,289..290,293)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          302..322
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          330..350
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..356
                     /gene="OSR2"
                     /coded_by="XM_041470848.1:246..1316"
                     /db_xref="GeneID:121355433"
ORIGIN      
        1 mqgarkyprm avgrgrravl ggfstglgsp seapaappar ahlgkmgska lpapiplhps
       61 lqltnysflq avntfpaavd qlqglyglsa vqtmhmnhwt lgypsvheit rstitemaaq
      121 glvdtrfpfp alpfathlfh pkqgaiahvl palhkdrprf dfanlavaat qedppkvgel
      181 aklspglasp lsginklspd rkpsrgrlps ktkkefickf cgrhftksyn lliherthtd
      241 erpytcdich kafrrqdhlr dhryihskek pfkcqecgkg fcqsrtlavh ktlhmqesph
      301 kcptcgrtfn qrsnlkthll thtdikpync eqcgkvfrrn cdlrrhslth tprqdf
//
LOCUS       XP_041326783             320 aa            linear   VRT 06-MAY-2021
DEFINITION  protein odd-skipped-related 2 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326783
VERSION     XP_041326783.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470849.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..320
                     /product="protein odd-skipped-related 2 isoform X2"
                     /calculated_mol_wt=35015
     Region          216..238
                     /region_name="zf-C2H2"
                     /note="Zinc finger, C2H2 type; pfam00096"
                     /db_xref="CDD:395048"
     Region          218..238
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(223,225,227,229..230,233..234,237,251,253,257..258,
                     261..262,265,279,281,283,285..286,289..290,293)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          230..255
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          246..266
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          258..281
                     /region_name="zf-H2C2_2"
                     /note="Zinc-finger double domain; pfam13465"
                     /db_xref="CDD:463886"
     Region          274..294
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..320
                     /gene="OSR2"
                     /coded_by="XM_041470849.1:243..1205"
                     /db_xref="GeneID:121355433"
ORIGIN      
        1 mqgarkyprm avgrgrravl ggfstglgsp seapaappar ahlgkmgska lpapiplhps
       61 lqltnysflq avntfpaavd qlqglyglsa vqtmhmnhwt lgypsvheit rstitemaaq
      121 glvdtrfpfp alpfathlfh pkqgaiahvl palhkdrprf dfanlavaat qedppkvgel
      181 aklspglasp lsginklspd rkpsrgrlps ktkkefickf cgrhftksyn lliherthtd
      241 erpytcdich kafrrqdhlr dhryihskek pfkcqecgkg fcqsrtlavh ktlhmqtssp
      301 ttvssaakcs getviyggtv
//
LOCUS       XP_041326784             311 aa            linear   VRT 06-MAY-2021
DEFINITION  protein odd-skipped-related 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326784
VERSION     XP_041326784.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470850.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="protein odd-skipped-related 2 isoform X3"
                     /calculated_mol_wt=35265
     Region          <171..306
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          173..193
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(178,180,182,184..185,188..189,192,206,208,212..213,
                     216..217,220,234,236,238,240..241,244..245,248)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          201..221
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          229..249
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          257..277
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          285..305
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..311
                     /gene="OSR2"
                     /coded_by="XM_041470850.1:390..1325"
                     /db_xref="GeneID:121355433"
ORIGIN      
        1 mgskalpapi plhpslqltn ysflqavntf paavdqlqgl yglsavqtmh mnhwtlgyps
       61 vheitrstit emaaqglvdt rfpfpalpfa thlfhpkqga iahvlpalhk drprfdfanl
      121 avaatqedpp kvgelaklsp glasplsgin klspdrkpsr grlpsktkke fickfcgrhf
      181 tksynllihe rthtderpyt cdichkafrr qdhlrdhryi hskekpfkcq ecgkgfcqsr
      241 tlavhktlhm qesphkcptc grtfnqrsnl kthllthtdi kpynceqcgk vfrrncdlrr
      301 hslthtprqd f
//
LOCUS       XP_041326785             311 aa            linear   VRT 06-MAY-2021
DEFINITION  protein odd-skipped-related 2 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326785
VERSION     XP_041326785.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470851.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..311
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..311
                     /product="protein odd-skipped-related 2 isoform X3"
                     /calculated_mol_wt=35265
     Region          <171..306
                     /region_name="COG5048"
                     /note="FOG: Zn-finger [General function prediction only]"
                     /db_xref="CDD:227381"
     Region          173..193
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Site            order(178,180,182,184..185,188..189,192,206,208,212..213,
                     216..217,220,234,236,238,240..241,244..245,248)
                     /site_type="other"
                     /note="putative nucleic acid binding site [nucleotide
                     binding]"
                     /db_xref="CDD:275368"
     Region          201..221
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          229..249
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          257..277
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     Region          285..305
                     /region_name="C2H2 Zn finger"
                     /note="C2H2 Zn finger [structural motif]"
                     /db_xref="CDD:275368"
     CDS             1..311
                     /gene="OSR2"
                     /coded_by="XM_041470851.1:386..1321"
                     /db_xref="GeneID:121355433"
ORIGIN      
        1 mgskalpapi plhpslqltn ysflqavntf paavdqlqgl yglsavqtmh mnhwtlgyps
       61 vheitrstit emaaqglvdt rfpfpalpfa thlfhpkqga iahvlpalhk drprfdfanl
      121 avaatqedpp kvgelaklsp glasplsgin klspdrkpsr grlpsktkke fickfcgrhf
      181 tksynllihe rthtderpyt cdichkafrr qdhlrdhryi hskekpfkcq ecgkgfcqsr
      241 tlavhktlhm qesphkcptc grtfnqrsnl kthllthtdi kpynceqcgk vfrrncdlrr
      301 hslthtprqd f
//
LOCUS       XP_041326786             358 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 7 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326786
VERSION     XP_041326786.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470852.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..358
                     /product="cyclin-dependent kinase 7 isoform X1"
                     /calculated_mol_wt=40165
     Region          9..306
                     /region_name="STKc_CDK7"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 7; cd07841"
                     /db_xref="CDD:270833"
     Site            order(16..19,21..22,24,37,39,59,73,89..92,95,97..98,135,
                     137,139..140,142,153,156,158,168,170..173,175,213..214)
                     /site_type="active"
                     /db_xref="CDD:270833"
     Site            order(16,18..22,24,37,39,73,89..92,139..140,158)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270833"
     Site            order(51..53,55,58..59,61..62,65..66,78,80,85,124,
                     127..130,158,160..163,167..168,279,283..285)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270833"
     Site            order(59,97,135,137,156,168,170..173,175,213..214)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270833"
     Site            order(152..163,165..175)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270833"
     CDS             1..358
                     /gene="CDK7"
                     /coded_by="XM_041470852.1:250..1326"
                     /db_xref="GeneID:121355434"
ORIGIN      
        1 mdararakry ekldflgegq fatvfkakdk tnnrivaikk iklghrseak dginrtalre
       61 ikllqelshp niiglidafg hksnislvfd fmetdlevii kdtsivltqs hikaymlmtl
      121 qgleylhqhw ilhrdlkpnn llldengvlk ladfglaksf gspnrvythq vvtrwyrape
      181 llfgarmygv gvdmwavgci laelllrvpf lpgdsdldql trifetlgtp teeqwpgmts
      241 lpdyvtfkpf pgmplqhifs aagddllsll qglftfnpst rvtatqalkq kyfsnrpgpt
      301 pgnqlprpnc paeaakeqqn allnlkrkrt egidqgsvta laaltdlegf ypkdyqkn
//
LOCUS       XP_041326787             343 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 7 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326787
VERSION     XP_041326787.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470853.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..343
                     /product="cyclin-dependent kinase 7 isoform X2"
                     /calculated_mol_wt=38579
     Region          9..306
                     /region_name="STKc_CDK7"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 7; cd07841"
                     /db_xref="CDD:270833"
     Site            order(16..19,21..22,24,37,39,59,73,89..92,95,97..98,135,
                     137,139..140,142,153,156,158,168,170..173,175,213..214)
                     /site_type="active"
                     /db_xref="CDD:270833"
     Site            order(16,18..22,24,37,39,73,89..92,139..140,158)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270833"
     Site            order(51..53,55,58..59,61..62,65..66,78,80,85,124,
                     127..130,158,160..163,167..168,279,283..285)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270833"
     Site            order(59,97,135,137,156,168,170..173,175,213..214)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270833"
     Site            order(152..163,165..175)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270833"
     CDS             1..343
                     /gene="CDK7"
                     /coded_by="XM_041470853.1:247..1278"
                     /db_xref="GeneID:121355434"
ORIGIN      
        1 mdararakry ekldflgegq fatvfkakdk tnnrivaikk iklghrseak dginrtalre
       61 ikllqelshp niiglidafg hksnislvfd fmetdlevii kdtsivltqs hikaymlmtl
      121 qgleylhqhw ilhrdlkpnn llldengvlk ladfglaksf gspnrvythq vvtrwyrape
      181 llfgarmygv gvdmwavgci laelllrvpf lpgdsdldql trifetlgtp teeqwpgmts
      241 lpdyvtfkpf pgmplqhifs aagddllsll qglftfnpst rvtatqalkq kyfsnrpgpt
      301 pgnqlprpnc paeaakeqqn allnlkrkrt egidqglpkk lif
//
LOCUS       XP_041326789             267 aa            linear   VRT 06-MAY-2021
DEFINITION  cyclin-dependent kinase 7 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326789
VERSION     XP_041326789.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470855.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..267
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..267
                     /product="cyclin-dependent kinase 7 isoform X3"
                     /calculated_mol_wt=29845
     Region          <1..215
                     /region_name="STKc_CDK7"
                     /note="Catalytic domain of the Serine/Threonine Kinase,
                     Cyclin-Dependent protein Kinase 7; cd07841"
                     /db_xref="CDD:270833"
     Site            order(6,44,46,65,77,79..82,84,122..123)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270833"
     Site            order(61..72,74..84)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270833"
     CDS             1..267
                     /gene="CDK7"
                     /coded_by="XM_041470855.1:252..1055"
                     /db_xref="GeneID:121355434"
ORIGIN      
        1 metdleviik dtsivltqsh ikaymlmtlq gleylhqhwi lhrdlkpnnl lldengvlkl
       61 adfglaksfg spnrvythqv vtrwyrapel lfgarmygvg vdmwavgcil aelllrvpfl
      121 pgdsdldqlt rifetlgtpt eeqwpgmtsl pdyvtfkpfp gmplqhifsa agddllsllq
      181 glftfnpstr vtatqalkqk yfsnrpgptp gnqlprpncp aeaakeqqna llnlkrkrte
      241 gidqgsvtal aaltdlegfy pkdyqkn
//
LOCUS       XP_041326790             874 aa            linear   VRT 06-MAY-2021
DEFINITION  zinc fingers and homeoboxes protein 1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326790
VERSION     XP_041326790.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470856.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..874
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..874
                     /product="zinc fingers and homeoboxes protein 1"
                     /calculated_mol_wt=97316
     Region          99..151
                     /region_name="zf_C2H2_ZHX"
                     /note="Zinc-fingers and homeoboxes C2H2 finger domain;
                     pfam18387"
                     /db_xref="CDD:465737"
     Region          <301..345
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          469..524
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(469..470,472,489,495,508,510..511,514..515,517..519,
                     521..522)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     Site            order(471,511,514..515,518)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          576..622
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Region          669..720
                     /region_name="homeodomain"
                     /note="Homeodomain; DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; cd00086"
                     /db_xref="CDD:238039"
     Site            order(669,709,712..713,716)
                     /site_type="other"
                     /note="specific DNA base contacts [nucleotide binding]"
                     /db_xref="CDD:238039"
     Region          <788..824
                     /region_name="Homez"
                     /note="Homeodomain leucine-zipper encoding, Homez;
                     pfam11569"
                     /db_xref="CDD:463297"
     CDS             1..874
                     /gene="ZHX1"
                     /coded_by="XM_041470856.1:861..3485"
                     /db_xref="GeneID:121355435"
ORIGIN      
        1 maskrksttp cmvlaneqdp dlemvsdlee gppvltpadn ptaegvtsde dvheyadsdn
       61 kkntnkvegg yeckyctfqt pdlnmftfhv dsehpnvvln ssyvclecnf ltkrydalse
      121 hnlkhhpgee nfkltmvkrn nqtifeqtvn dltfdgsfvr eenagqadss evpssgisis
      181 ktpimkmmks kpeakriavf hnvvddipge ekgtenepns eevvenpppa vseskpnhsv
      241 vcsaadvaga vvtpapvlqp gvaqvitavt apqnsnlipk vlipvnsipa yntaldnnpl
      301 llntynkfpy ptmseitvls sqakyteeqi kiwfsaqrlk hgvswtpeev eearrkqfng
      361 tvhtvpqtit vipahisaas nglpsilqtc qivgqpglvl tqvagtntlp vtapialtva
      421 gvpnqtqlqk sqihsgqpva etkqaaaipa pqpiknestl mnpdsfgira kktkeqlael
      481 kvsylknqfp qdseivrlmk itgltkgeik kwfsdtrynq rnsknnhgih lnsdscativ
      541 idssdemnes ptgvtpqskp swgtfpdftp qkfkektseq lqvlqasfln npvlteeemn
      601 rlraqtkltr reidawftek rksnvlkeeg admnesnags skeesgetsv gdgaagtksg
      661 cstsskigkk speqlhmlks sfvrtqwpsp qeynklaeet glprseivsw fgdtryawkn
      721 gglkwyyyyq sasanslngq gfarkrgrgr pkgrgrgrpr grprgskrln cwdrgvsvik
      781 fktgtailkd yymkhkflne qdldelvaks hmgyeqvrew faerqrrlel gielfdenee
      841 edemlddqed eeetddsdtw epprhvkrkl sktd
//
LOCUS       XP_041326791             403 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C8orf76 homolog isoform X1 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326791
VERSION     XP_041326791.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470857.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="uncharacterized protein C8orf76 homolog isoform
                     X1"
                     /calculated_mol_wt=45068
     Region          5..393
                     /region_name="DUF5588"
                     /note="Family of unknown function (DUF5588); pfam17826"
                     /db_xref="CDD:465524"
     Region          62..83
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276810"
     CDS             1..403
                     /gene="CUNH8orf76"
                     /coded_by="XM_041470857.1:158..1369"
                     /db_xref="GeneID:121355436"
ORIGIN      
        1 mepelgpefe dslfapsrer regggdgapc garhceprwf hsaadagega ggitsskfra
       61 dwafrqrdfe kalceysdcl lllpasniam rrdvqegqar clsrlgrhke aldiaekmrn
      121 satntdhltt vlnlqfsiyq glenvekkmm clqqliclhp fnpwfwklla evymsllqnl
      181 splvipeanl nqseelcvsn ssfktstgre ihlqphrseg qkegpwfsla aetkgenavt
      241 cpssqvvkef lctsgelegt dkekcadska wkqnmlkkvg ikacasfira rlllqltqsq
      301 qlsfvleknr kcqkeiddkv allafdensl llmtkamgqd lipeklkeef qgevkcigps
      361 alsslvtasv vefeikwfgn lqndlchfdg qfysniylpp svt
//
LOCUS       XP_041326792             403 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C8orf76 homolog isoform X2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326792
VERSION     XP_041326792.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470858.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..403
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..403
                     /product="uncharacterized protein C8orf76 homolog isoform
                     X2"
                     /calculated_mol_wt=45068
     Region          5..393
                     /region_name="DUF5588"
                     /note="Family of unknown function (DUF5588); pfam17826"
                     /db_xref="CDD:465524"
     Region          62..83
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276810"
     CDS             1..403
                     /gene="CUNH8orf76"
                     /coded_by="XM_041470858.1:55..1266"
                     /db_xref="GeneID:121355436"
ORIGIN      
        1 mepelgpefe dslfapsrer regggdgapc garhceprwf hsaadagega ggitsskfra
       61 dwafrqrdfe kalceysdcl lllpasniam rrdvqegqar clsrlgrhke aldiaekmrn
      121 satntdhltt vlnlqfsiyq glenvekkmm clqqliclhp fnpwfwklla evymsllqnl
      181 splvipeanl nqseelcvsn ssfktstgre ihlqphrseg qkegpwfsla aetkgenavt
      241 cpssqvvkef lctsgelegt dkekcadska wkqnmlkkvg ikacasfira rlllqltqsq
      301 qlsfvleknr kcqkeiddkv allafdensl llmtkamgqd lipeklkeef qgevkcigps
      361 alsslvtasv vefeikwfgn lqndlchfdg qfysniylpp svt
//
LOCUS       XP_041326793             381 aa            linear   VRT 06-MAY-2021
DEFINITION  uncharacterized protein C8orf76 homolog isoform X3 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326793
VERSION     XP_041326793.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470859.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..381
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..381
                     /product="uncharacterized protein C8orf76 homolog isoform
                     X3"
                     /calculated_mol_wt=42549
     Region          5..371
                     /region_name="DUF5588"
                     /note="Family of unknown function (DUF5588); pfam17826"
                     /db_xref="CDD:465524"
     Site            order(57..58,61..62,64,88,91..92,100..101,103..104,142,
                     145..146,149..150,153)
                     /site_type="other"
                     /note="putative protein binding surface [polypeptide
                     binding]"
                     /db_xref="CDD:276809"
     Region          57..81
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     Region          86..136
                     /region_name="TPR repeat"
                     /note="TPR repeat [structural motif]"
                     /db_xref="CDD:276809"
     CDS             1..381
                     /gene="CUNH8orf76"
                     /coded_by="XM_041470859.1:162..1307"
                     /db_xref="GeneID:121355436"
ORIGIN      
        1 mepelgpefe dslfapsrer regggdgapc garhceprwf hsaadagega ggitsskfra
       61 dwafrqrdfe kalceysdcl lllpasniam rrdvqegqar clsrlgrhke aldiaekmgl
      121 envekkmmcl qqliclhpfn pwfwkllaev ymsllqnlsp lvipeanlnq seelcvsnss
      181 fktstgreih lqphrsegqk egpwfslaae tkgenavtcp ssqvvkeflc tsgelegtdk
      241 ekcadskawk qnmlkkvgik acasfirarl llqltqsqql sfvleknrkc qkeiddkval
      301 lafdenslll mtkamgqdli peklkeefqg evkcigpsal sslvtasvve feikwfgnlq
      361 ndlchfdgqf ysniylppsv t
//
LOCUS       XP_041326794             921 aa            linear   VRT 06-MAY-2021
DEFINITION  LOW QUALITY PROTEIN: ectonucleotide
            pyrophosphatase/phosphodiesterase family member 2 [Pyrgilauda
            ruficollis].
ACCESSION   XP_041326794
VERSION     XP_041326794.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470860.1
KEYWORDS    RefSeq; corrected model.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            frameshifts :: corrected 1 indel
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..921
                     /product="LOW QUALITY PROTEIN: ectonucleotide
                     pyrophosphatase/phosphodiesterase family member 2"
                     /calculated_mol_wt=104779
     Region          118..159
                     /region_name="SO"
                     /note="Somatomedin B -like domains; smart00201"
                     /db_xref="CDD:197571"
     Region          160..203
                     /region_name="SO"
                     /note="Somatomedin B -like domains; smart00201"
                     /db_xref="CDD:197571"
     Region          227..540
                     /region_name="Phosphodiest"
                     /note="Type I phosphodiesterase / nucleotide
                     pyrophosphatase; pfam01663"
                     /db_xref="CDD:396300"
     Site            order(233,270..271,292,373,377,421..422,537)
                     /site_type="active"
                     /db_xref="CDD:293742"
     Site            order(233,270..271,292,373,377,422,537)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:293742"
     Site            562..564
                     /site_type="other"
                     /note="homodimer interface [polypeptide binding]"
                     /db_xref="CDD:293742"
     Region          673..903
                     /region_name="NUC"
                     /note="DNA/RNA non-specific endonuclease; smart00477"
                     /db_xref="CDD:214683"
     Site            order(735..736,738,775,779)
                     /site_type="active"
                     /db_xref="CDD:238043"
     Site            order(735..736,779)
                     /site_type="other"
                     /note="substrate binding site [chemical binding]"
                     /db_xref="CDD:238043"
     CDS             1..921
                     /gene="ENPP2"
                     /coded_by="XM_041470860.1:1..2766"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: deleted 2 bases in 1 codon"
                     /db_xref="GeneID:121355438"
ORIGIN      
        1 meplscrgsw hpdfsraaag pgrgaapepa rgrgsprppr dipaahlpap lqrqrqaqlp
       61 rrasdmekkd plvislfafa fgvnvcmgft tnrfrrseew degpvsvlsd spwintsgsc
      121 knrcfelqea eppgcrcdnl cksynsccfd fdelclktar gwectkdrcg etrnddnach
      181 csedclsrgd cctnyqvvck gethwvdddc eeikapecpa gfvrppliif svdgfrasym
      241 kkgnkvmpni eklrscgths pymrpvyptk tfpnlytlat glypeshgiv gnsmydpvfd
      301 asfslrgrek fnhrwwggqp iwitaakqgv kagtffwsiv ipherrilti lqwltlpdne
      361 rpyvyafyse qpdaaghryg pfnsemmvnp lreidktvgq lmdglkqlkl hrcvnvifvg
      421 dhgmedttce rteflsnylt nvddiillpg slgrirprss nnlkydpkmi vanltcrkpd
      481 qhfkpylkqh lpkrlhyann rriedvhllv drkwhvarka mdvykkptgk cffhgdhgyd
      541 nkinsmqtvf igygptfkyk tkvppfenie lynvmcdllg lkpapnngth gslnhllran
      601 vykptvpdev akplypvalp sasdfdigct cddkknklde lnkrfhvkgt edkhllygrp
      661 avlyrtkyni lhhhdfesgy setflmplwt sytiskqaev sgvpehlasc vrpdlrispg
      721 nsqscaayrg dkqlsygflf ppqlsssaea kydaflitni ipmypafkkv wnyfqrvlvk
      781 ryaterngvn visgpifdyd ydglhdtpdk ikqfvegsai pvpthyyaii tscldftqpa
      841 dkcdgplsvl syilphrpdn descnssede skwvedllkm htarvrdieq ltsldffrkt
      901 srsyteilsl ktylhtfese i
//
LOCUS       XP_041326795             315 aa            linear   VRT 06-MAY-2021
DEFINITION  metaxin-3 isoform X1 [Pyrgilauda ruficollis].
ACCESSION   XP_041326795
VERSION     XP_041326795.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470861.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="metaxin-3 isoform X1"
                     /calculated_mol_wt=35381
     Region          23..142
                     /region_name="Tom37"
                     /note="Outer mitochondrial membrane transport complex
                     protein; pfam10568"
                     /db_xref="CDD:463150"
     Region          105..241
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(111,118,197,200..201,204,208)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..315
                     /gene="MTX3"
                     /coded_by="XM_041470861.1:21..968"
                     /db_xref="GeneID:121355439"
ORIGIN      
        1 maapmelscw ggdwglpslh pqsltvmaya kfsgapltvt tinkswralk gdlpvlssed
       61 ivisqpakil nflrkqkyna dydlsakqga dtlayialle ekllpallht fwieaenycn
      121 vtkpwfasri afplnlylpg kmsrealnri lltkggpply slteveaqiy rdakeclnll
      181 skrlgtsqff fgdtpttlda fvfgflapiy kvcfprvhlq ehlkqlpnlc rfcddiltcy
      241 frltvsghsp agqdtadanl qkltqlvnke snliekirls lflcrwmttf vrvltiplvs
      301 sqrssllqee kkavq
//
LOCUS       XP_041326796             315 aa            linear   VRT 06-MAY-2021
DEFINITION  metaxin-3 isoform X2 [Pyrgilauda ruficollis].
ACCESSION   XP_041326796
VERSION     XP_041326796.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470862.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..315
                     /product="metaxin-3 isoform X2"
                     /calculated_mol_wt=35381
     Region          23..142
                     /region_name="Tom37"
                     /note="Outer mitochondrial membrane transport complex
                     protein; pfam10568"
                     /db_xref="CDD:463150"
     Region          105..241
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(111,118,197,200..201,204,208)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..315
                     /gene="MTX3"
                     /coded_by="XM_041470862.1:15..962"
                     /db_xref="GeneID:121355439"
ORIGIN      
        1 maapmelscw ggdwglpslh pqsltvmaya kfsgapltvt tinkswralk gdlpvlssed
       61 ivisqpakil nflrkqkyna dydlsakqga dtlayialle ekllpallht fwieaenycn
      121 vtkpwfasri afplnlylpg kmsrealnri lltkggpply slteveaqiy rdakeclnll
      181 skrlgtsqff fgdtpttlda fvfgflapiy kvcfprvhlq ehlkqlpnlc rfcddiltcy
      241 frltvsghsp agqdtadanl qkltqlvnke snliekirls lflcrwmttf vrvltiplvs
      301 sqrssllqee kkavq
//
LOCUS       XP_041326797             312 aa            linear   VRT 06-MAY-2021
DEFINITION  metaxin-3 isoform X3 [Pyrgilauda ruficollis].
ACCESSION   XP_041326797
VERSION     XP_041326797.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470863.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Pyrgilauda ruficollis"
                     /isolate="IOZ18807"
                     /db_xref="taxon:221976"
                     /chromosome="Unknown"
                     /sex="pooled male and female"
                     /tissue_type="blood"
                     /altitude="4200 m"
     Protein         1..312
                     /product="metaxin-3 isoform X3"
                     /calculated_mol_wt=34758
     Region          23..142
                     /region_name="Tom37"
                     /note="Outer mitochondrial membrane transport complex
                     protein; pfam10568"
                     /db_xref="CDD:463150"
     Region          105..241
                     /region_name="GST_C_Metaxin1_3"
                     /note="C-terminal, alpha helical domain of Metaxin 1,
                     Metaxin 3, and similar proteins; cd03212"
                     /db_xref="CDD:198321"
     Site            order(111,118,197,200..201,204,208)
                     /site_type="other"
                     /note="putative N-terminal domain interface [polypeptide
                     binding]"
                     /db_xref="CDD:198321"
     CDS             1..312
                     /gene="MTX3"
                     /coded_by="XM_041470863.1:21..959"
                     /db_xref="GeneID:121355439"
ORIGIN      
        1 maapmelscw ggdwglpslh pqsltvmaya kfsgapltvt tinkswralk gdlpvlssed
       61 ivisqpakil nflrkqkyna dydlsakqga dtlayialle ekllpallht fwieaenycn
      121 vtkpwfasri afplnlylpg kmsrealnri lltkggpply slteveaqiy rdakeclnll
      181 skrlgtsqff fgdtpttlda fvfgflapiy kvcfprvhlq ehlkqlpnlc rfcddiltcy
      241 frltvsghsp agqdtadanl qkltqlvnke snliekmddn lrksphhppr klttlklaag
      301 geesspmsrl sp
//
LOCUS       XP_041326798             291 aa            linear   VRT 06-MAY-2021
DEFINITION  metaxin-3 isoform X4 [Pyrgilauda ruficollis].
ACCESSION   XP_041326798
VERSION     XP_041326798.1
DBLINK      BioProject: PRJNA703052
DBSOURCE    REFSEQ: accession XM_041470864.1
KEYWORDS    RefSeq.
SOURCE      Pyrgilauda ruficollis (rufous-necked snowfinch)
  ORGANISM  Pyrgilauda ruficollis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Passeridae; Pyrgilauda.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024523822.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pyrgilauda ruficollis Annotation
                                           Release 100
            Annotation Version          :: 